LOCUS       DASWGA010000001         5960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_253229, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000001 DASWGA010000000
VERSION     DASWGA010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5960
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253229"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..530
                     /gene="modA"
                     /locus_tag="VF991_00005"
     CDS             <1..530
                     /gene="modA"
                     /locus_tag="VF991_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9554840.1"
                     /translation="YLETRELIDPQTRIDLLGNTLVLVAPADSPAAVTIATSFPLAAL
                     LGDGRLAMADPASVPAGKYGKVALERLGVWSSVEKRIAAAENVRAALLLVARGEAPLG
                     IVYSTDSAAEPGVRIVATFPEDSHPPIIYPAALTRDSRNSDAKAFLDFLRSAKARTSF
                     EKQGFTVLVRSASAT"
     gene            527..1213
                     /gene="modB"
                     /locus_tag="VF991_00010"
     CDS             527..1213
                     /gene="modB"
                     /locus_tag="VF991_00010"
                     /EC_number="7.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012606153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015098 - molybdate ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HEX9554841.1"
                     /translation="MTPEEWTAVRLSLLVATTATLASLPFGVAIAWLLARRRFWGKSL
                     LDTLVHLPLIMPPVVTGYLLLISFGRRGPIGAFLADEFGIVFSFRWTGAALACAVMGF
                     PLLVRAIRLSIEAVDTRLEAAAGTLGANPLLVFATITLPLCLPGVIAGAILCFAKSMG
                     EFGATITFVSNIPGETQTLPTLIYTLTQIPGGDAGALRLTLVSIAISMAALLGSELLA
                     RRIGVRQMAA"
     gene            1210..2277
                     /gene="modC"
                     /locus_tag="VF991_00015"
     CDS             1210..2277
                     /gene="modC"
                     /locus_tag="VF991_00015"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein"
                     /protein_id="HEX9554842.1"
                     /translation="MSLDVDLDHAREGFRLCARFSAAPGLTALFGRSGSGKTTLVDIV
                     GGLIRPDRGKVAVDGQVLVDTESSLFVPKHRRRIGYVFQDSRLFPHLSVRRNLLYGRW
                     FTQGNGDGAAADLGAVVELLGIGTLLERRPDSLSGGEKQRVAIGRALLAHPRLLLMDE
                     PLASLDEARRAEILPYIERLRDESGVPILYVSHSVAEVARLATTVVILTEGRVTAVGP
                     VADILAQADTADGGSVLEAAVVRHDEAFQLSVLASAAGELQVPRLSAPVGAPVRAYIR
                     ARDVMLSLKPPEEISALNVLAGRVVAISPLANGAQADVRLDCNGAALTARLTAKSVQR
                     LALAPGRPVHAVIKSVSFERS"
     gene            2286..2636
                     /locus_tag="VF991_00020"
     CDS             2286..2636
                     /locus_tag="VF991_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX9554843.1"
                     /translation="MPHLSIRIDFDHEGRLGPGKVALLESIAREGSISAAGRSMNMSY
                     KRAWELVAEINQSFAEPLVAAQTGGKAGGGAALTPRGAELIRHYRAIERKALTAAASH
                     LKALQAISRSRRRK"
     gene            2697..3749
                     /locus_tag="VF991_00025"
     CDS             2697..3749
                     /locus_tag="VF991_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HEX9554844.1"
                     /translation="MPSVALDKAEFARRVRRRFYDPAFKSVEAEIERIIDVAWDGYHS
                     YRKSPRTKRAGPRYADPKYELPVEWSETRDAIARAERRQKSPAAKPRVLLINGSSRND
                     QTCPGEMSKSFRLVEMARQVFAAERDFEVEVLDLSRLTAEYGRNIHPCKACVSTAMPL
                     CHWPCSCYPNHAMGQVSDWMAEIYPMWAAAHGIMIVTPVNWYQAPAGLKAMIDRLVCA
                     DGGNPDPTTTSGKDPQKAKDLEMKGWDYPRHLAGRVFSVVVHGDAAGCETLRRILVDW
                     LKDMGLVSSGHAAELDRYVGYFEPYATSHDALDRDKAFQEETRNAARALVEAVKLLRR
                     GKLAQPDARLREVRPK"
     gene            3877..5106
                     /locus_tag="VF991_00030"
     CDS             3877..5106
                     /locus_tag="VF991_00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX9554845.1"
                     /translation="MTAPFDFAPLLAPGTPPPAVKWNGFPKYNFIGGHNDAKQVPVDA
                     LIAAATAVLRREGATLATYGLNSGPLGYRPLREFLAGKLKGHAGIDCSPDEILITSGS
                     MQGLDLVNSLLLARGDTVLIEQETYGGALTKLTKLGINTIGIPLDGEGLRLDVLKHKL
                     EELKSKAIKAKYIYTIPTVQNPTGAIMGEARRAELLKIAAEHGVMIFEDECYSDLVWN
                     GKRPRSLYAMAGGEGVIHIGSFSKSIAPALRVGYIVAKWDVLARILALKQDAGSGALE
                     QMVLAEFCKQHFAQHVPKLAKTLAAKLQTLREALAEQFGTSAEFGDPPGGIYLWIKLP
                     DNVDTTKLAQAALAVGVSLNPGPEWSTNKDYARCRLRLCFANPEPETIRQGVAVLAEV
                     CRREFGVPLRSANVDKR"
     gene            complement(5103..5525)
                     /locus_tag="VF991_00035"
     CDS             complement(5103..5525)
                     /locus_tag="VF991_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9554846.1"
                     /translation="MQAQPYVFFNGKCEEALEFYKQALGAKVEMMMRFSEAPEKPQPG
                     MVPPGSENKIMHAAFKVGDTQILASDGHADGKPVFQGFGLAISVANDAEAAKLFNAVG
                     KGGKVQAPLGKTFFASSFGMVTDKFGVLWMVLAPTEMA"
     gene            complement(5541..>5960)
                     /locus_tag="VF991_00040"
     CDS             complement(5541..>5960)
                     /locus_tag="VF991_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9554847.1"
                     /translation="KPPPFAAGGSGLVSTADDYLAFCRMLLNKGRHGGERILSRPAVE
                     LMMSDQLTPQQKQGAGLFFGHGASWGMGGAVVTRRTDLFTTPGRYGWDGGYGTSGHLD
                     PAEDMVGILLTQRMMDSPQPPRVFTDFWTSAYQSIDD"
BASE COUNT          962 a         2067 c         1957 g          974 t
ORIGIN      
        1 actacctgga aacccgcgag ctgatcgacc cgcaaacccg catcgacttg ctcggcaaca
       61 ccctcgtgct ggtcgcgccg gcggacagcc cggccgcggt gacgatcgcc accagctttc
      121 cgctcgccgc gctgctcggc gatgggcgtc tcgcgatggc tgacccggcg tctgtgccgg
      181 ccggcaaata cggcaaggtc gcactcgaaa ggctcggcgt ttggagttcg gtcgaaaagc
      241 ggatcgccgc ggccgagaat gtccgcgctg cgctcctcct ggtggcgcgc ggcgaggcgc
      301 cgctcggcat cgtctacagc accgactcgg cggccgagcc cggagtcagg atcgtggcaa
      361 ccttccccga ggactcgcat cctccgatca tctatccggc ggcattgacc agggactcgc
      421 gcaattcaga cgccaaggcc tttctcgact tcctgcgcag cgccaaggcg cgcacctcgt
      481 tcgagaagca gggttttacc gtcctggtac gatccgcttc cgcgacatga ctcccgagga
      541 atggacggcg gtcaggctga gcctgctggt cgccacgacg gcgacgctcg ccagcctgcc
      601 gttcggcgtc gccatcgcct ggctgctggc gcgccggcgg ttctggggca agagcctgct
      661 cgacacgctg gtccacctgc cgctcatcat gccgcccgtg gtgacgggct acctgctgtt
      721 gatctcgttc ggccggcgcg ggccgatcgg cgctttcctg gccgacgagt tcggcatcgt
      781 cttctccttc cgctggaccg gcgcggcgct cgcctgcgcg gtgatgggct ttcccctgct
      841 ggtgcgcgcc atccggcttt cgatcgaggc ggtcgacacg cggctcgagg cggcggccgg
      901 tacgctcggc gccaacccgc tcctggtgtt cgccaccatc accctgccgc tttgcctgcc
      961 cggcgtgatc gcgggcgcca tcctgtgctt cgccaagtcg atgggcgagt tcggcgccac
     1021 catcaccttc gtgtccaaca tcccgggcga gacgcagacc ttgccgacgc tgatctacac
     1081 cctgacccag atccccggcg gcgatgccgg cgcgctcagg ctcactttgg tgtcgatcgc
     1141 gatctccatg gcagcgctgc tcggctccga gctgctggcc cggcgcatcg gcgtgcggca
     1201 gatggcggca tgagcctcga cgtcgacctc gaccatgcgc gcgagggctt ccgcctctgc
     1261 gcgcgtttct cggcggcgcc cggcctgacg gcgctgttcg gccgttcggg ctcgggcaag
     1321 accacattgg tcgatatcgt cggcggcctg atccgtcccg atcgcggcaa ggtcgccgtt
     1381 gatggccagg tgctggtcga caccgaaagc agcctcttcg ttcccaagca tcggcggcgg
     1441 atcggctatg tcttccagga cagccggctg ttcccccatc tcagcgtgcg ccgcaacctg
     1501 ctttacggac gctggttcac ccaaggcaac ggcgatggcg cggcggccga ccttggcgcg
     1561 gtcgtcgagt tgctgggcat cggcaccttg ctcgagcggc ggcccgattc gctctccggc
     1621 ggcgagaagc agcgggtggc gatcggccgc gccctgctgg cccatccgcg gctgctgctg
     1681 atggacgagc cgctcgcctc gctcgacgag gcgcggcgag ccgagatcct gccctacatc
     1741 gagcggttgc gcgacgagtc gggcgtgccg atcctctatg tcagccattc cgtggccgag
     1801 gtggcccggc ttgccaccac ggtcgtgatc ctgaccgaag ggcgcgtgac ggcggtcggt
     1861 ccggtggccg acatcctggc gcaggccgac accgccgatg gcggaagcgt gctcgaggcc
     1921 gcagtggtcc gccatgacga agccttccag ctctcggtgc tggcctcggc cgcgggcgag
     1981 ctgcaggtgc cgcggctcag cgctccggtt ggcgcgcccg tgcgcgccta cattcgcgcc
     2041 cgcgacgtca tgctgtcgct aaagccgccg gaggagatca gcgcgctgaa cgtgctggcc
     2101 ggccgcgtcg ttgcgatcag cccgctcgcc aacggcgcgc aggccgatgt ccggttggat
     2161 tgcaacggcg ctgcgctcac ggccaggctc accgccaagt cggtgcagcg gctggcgctg
     2221 gcgcccggcc ggccggtcca tgccgtgatc aagagcgtgt cgttcgagcg cagctaggag
     2281 aaacgatgcc ccatctcagc atccgtatcg atttcgatca tgagggacgc ctgggaccgg
     2341 gcaaagttgc cttgctcgaa agtatcgccc gcgagggttc gatctcggcg gccggccgct
     2401 cgatgaacat gtcctacaag cgcgcctggg agctggtggc agagatcaac cagagcttcg
     2461 ccgagcccct ggtcgcggcc caaaccggcg gcaaggcggg tggcggcgcc gcgctcacgc
     2521 cgcggggcgc ggaactgatc cgccattacc gcgccatcga acgcaaggcg ctcaccgccg
     2581 cagcctccca tctcaaggcg ttgcaggcaa tttcccgcag ccgacgaaga aaataacgcg
     2641 ctatcctcgg cggaaacggg aggaccgccg tggccagggt aaaagtccgc aaaggcatgc
     2701 cgagcgtggc attggacaag gcggagttcg cccgccgcgt gcgccgacgc ttctacgatc
     2761 ccgccttcaa gtcggtcgag gcagagatcg agcgcatcat cgacgtggca tgggatggct
     2821 atcatagcta tcgcaagtcg ccgcgcacca agcgggcggg gccgcgctac gccgatccca
     2881 agtacgaact gccggtcgaa tggtcggaga cgcgcgacgc catcgcccgc gccgagcggc
     2941 gacagaaatc gccggccgcc aagccgcggg tcctgctgat caacggttcg tcgcgcaacg
     3001 accagacctg cccgggcgag atgtccaaaa gctttcgcct ggtcgagatg gcccgccagg
     3061 tcttcgccgc cgagcgcgac ttcgaggtcg aggtgctgga tctcagccgg ctgacagcgg
     3121 agtacggccg caacatccat ccttgcaagg cctgcgtgtc gacggcgatg ccgctctgcc
     3181 actggccctg ctcctgctat cccaaccatg cgatgggcca ggtcagcgac tggatggccg
     3241 agatctaccc gatgtgggcg gccgcgcacg gcatcatgat cgtgacgccg gtgaactggt
     3301 atcaggcgcc cgcggggctg aaggcgatga tcgatcgcct ggtctgcgcc gacggcggca
     3361 atcccgaccc gaccacgacg tcgggcaagg acccgcagaa ggccaaggac ctcgagatga
     3421 agggctggga ctatccgcgc catctcgccg gccgggtctt ttcggtcgtc gtccatggcg
     3481 atgccgcggg ctgcgagacg ctgcggcgca tcctggtcga ctggctcaag gacatgggtc
     3541 tggtctcgtc cggccatgcc gccgagctcg accgctatgt cggctacttc gaaccctacg
     3601 ccaccagcca tgacgcgctc gaccgcgaca aggctttcca ggaagagacc cgcaacgccg
     3661 cccgcgcgct ggtcgaagcc gtgaagctct tacgccgcgg aaagttggca cagcctgatg
     3721 cccggctgcg cgaggttcgg ccaaagtgag gccgtgatgg cgctgctggt ctgacgcccg
     3781 ttcgttccgc gccgtggcct ggaacgggcc aaaccagttg cggaccggcg gatcttggcc
     3841 cagcaattgg gctcaagaaa agccgaggaa accgccatga ccgccccatt cgatttcgcg
     3901 ccgctgctgg cgcccggcac gccgccgccc gccgtcaagt ggaacggatt tccaaagtac
     3961 aatttcatcg gcggccacaa cgacgccaag caggtgccgg tcgacgccct gatcgcggcg
     4021 gcgaccgcgg tgctccgccg cgagggcgcc acgcttgcga cctacggact gaacagcggc
     4081 ccgctcggct atcggccgct gcgcgagttt ttggccggca agctcaaggg ccacgccggc
     4141 atcgactgtt ccccggacga gatcctgatc acctcgggct ccatgcaggg cctcgacctg
     4201 gtcaacagcc tgctgctcgc ccggggcgac acggtgctga tcgagcagga aacctatggc
     4261 ggcgcgctca ccaagctcac caagctcggc atcaacacca tcggcatccc gctcgacggc
     4321 gaggggctgc gactcgatgt cttgaagcac aagctcgagg agctgaagag caaggccatc
     4381 aaagccaaat acatctacac catcccgacg gtgcagaacc cgaccggcgc catcatgggc
     4441 gaggcccgcc gcgccgagct tctgaagatc gccgccgagc atggcgtcat gatcttcgag
     4501 gacgagtgct attccgacct ggtgtggaat ggcaagcggc cgcgctcgct ctacgccatg
     4561 gcgggcggcg aaggcgtgat ccatatcggc tcgttctcca agtcgatcgc acccgccctg
     4621 cgcgtcggct acatcgtcgc caagtgggac gtgctggccc gcatcctggc gctgaagcag
     4681 gacgctggct cgggcgcgct cgagcagatg gtgctggccg agttctgcaa gcagcacttc
     4741 gcccagcacg tgccaaagct cgccaagacg ctggcggcca agctgcagac cttgcgcgag
     4801 gcgctggccg agcagttcgg cacctcggcc gagttcggcg atccgccggg cggcatctat
     4861 ctctggatca agctgcccga caacgtcgac accaccaagc tcgcgcaggc ggcgctcgcc
     4921 gtcggcgtgt cgctcaatcc cgggccggaa tggtcgacca acaaggacta cgcccgctgc
     4981 cggctgcgcc tctgcttcgc caaccccgag cccgaaacca tcaggcaggg cgtcgcggtg
     5041 ctggcagagg tctgccgacg cgagttcggc gtccccctgc gcagcgccaa cgtggacaag
     5101 cgctaggcca tctcggtcgg cgccagcacc atccacagca cgccgaactt gtcggtcacc
     5161 atgccgaagc tcgaggcgaa gaaggtcttg ccaagcggcg cctgaacctt gccgcccttg
     5221 ccgacggcgt tgaacagctt ggccgcctcg gcatcgttgg ccacgctgat cgccagccca
     5281 aagccctgaa aaaccggctt gccgtcggca tgtccgtcgg acgccaggat ctgcgtgtcg
     5341 ccgaccttga aggcggcgtg catgatcttg ttttccgatc ccggcgggac catgccgggc
     5401 tgcggtttct ccggcgcttc gctgaagcgc atcatcatct cgaccttggc gccgagggcc
     5461 tgcttgtaga actcgagcgc ttcctcgcac ttgccgttga agaacacata tggctgtgcc
     5521 tgcatgaccg ttctcctttg tcagtcgtcg atggattggt aggccgaggt ccagaaatca
     5581 gtgaacaccc gcggcggctg cggcgagtcc atcatgcgct gggtcaacag gatgccgacc
     5641 atgtcctcgg ccggatcgag atggcccgac gtgccgtagc cgccatccca gccgtaacgc
     5701 ccgggcgtgg tgaaaagatc cgtgcggcgt gtgaccacgg cgccgcccat gccccagctc
     5761 gcgccgtggc cgaagaacag cccggcgccc tgcttctgct gcggggtgag ttggtcggac
     5821 atcatcagct cgacggcggg gcgcgacaaa atgcgctcgc ctccgtgccg gcccttgttc
     5881 agcagcatgc gacagaaggc gagatagtcg tcggcggtcg acaccaggcc cgaaccgccg
     5941 gccgcgaagg gcggcggctt
//
LOCUS       DASWGA010000002         2253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1898712, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000002 DASWGA010000000
VERSION     DASWGA010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1898712"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..769
                     /locus_tag="VF991_00045"
     CDS             <1..769
                     /locus_tag="VF991_00045"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9554848.1"
                     /translation="LIDVSEAREAQESLHAAQTALAHAARVATLGEMSASIAHEVNQP
                     LAGIVTNGEAALRWLDRSEPELGEVRSAIERMVRDGKRASQVVERLRALVRKAPAQIL
                     PLDLNEVIAEAVSLVRREIHSHRATLQLDLARDLPPVVADRVELQQVVINLMVNGVQA
                     MEPVTDRPRRLVIRSFAQADDVVVAVGDSGVGIDPADMNRLFNAFFTTKTDGMGMGLS
                     ICRSIIESHGGRIWASSNGGPGMTFQFALPLRAEDAS"
     gene            766..1428
                     /locus_tag="VF991_00050"
     CDS             766..1428
                     /locus_tag="VF991_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9554849.1"
                     /translation="MSRPPQPPGTAKAQPIVFVVDDDPSVREALGSLFRSVGLQVELF
                     GSAAEFLQRKRPDGASCLVLDIRLPGVSGLDFQGQLVKANIRTPIIFMTGHGDIPMSV
                     RAMKAGAVDFLAKPFRDQDMLDAVAAAIQRDQQAREAEQAAAVLRTAYESLTAREREV
                     MALVTSGLMNKQAAGQLGLSEITVKIHRGQAMRKMKAKSLADLVRMAESLGLHQPKAH
                     TS"
     gene            1531..1929
                     /locus_tag="VF991_00055"
     CDS             1531..1929
                     /locus_tag="VF991_00055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9554850.1"
                     /translation="MSSAAKISIVDDDESVRAAMSSLVRSLGYQACEFASAEAFLASP
                     HLQDTSCLIADVQMPGMNGLELQDALLARQQGVPIIFITAFPADRIRQRAEAAGAAGF
                     FSKPVDSQMIIRCLDSALTRRERRAGQACP"
     gene            1926..>2253
                     /locus_tag="VF991_00060"
     CDS             1926..>2253
                     /locus_tag="VF991_00060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HEX9554851.1"
                     /translation="MKRITPTIAARLASIAAILLAVTAALAFAGGVFSPGRLGPGAIV
                     DALQVHDGLHPGFRRAHAKGLCIAGTFQSNGNGTALSKAQVFAPGTVPVIGRFSTGGG
                     QPYAPDG"
BASE COUNT          380 a          790 c          727 g          356 t
ORIGIN      
        1 gctgatcgac gtctcggaag cccgtgaagc gcaggagtcg ctgcatgcgg cgcaaacggc
       61 gctggcccat gccgcgcgcg tggccacgct cggggagatg agtgcctcga tcgcccacga
      121 ggtcaaccag ccgctggccg gcatcgtcac caacggcgaa gcagcactgc gctggctcga
      181 ccgcagcgaa ccggagctcg gcgaggtgcg cagcgcgatc gagcgcatgg tccgcgacgg
      241 caagcgcgcc agccaggtgg tcgagcggct gcgcgccctc gtcagaaagg cgccggcgca
      301 gatcctgccg ctcgacctga atgaggtcat cgccgaggcc gtctccctgg tgcggcgcga
      361 aatccacagt catcgcgcca cgctgcagct cgatctcgcg cgcgatctgc cgccggtcgt
      421 cgccgacagg gtcgaattgc agcaggtcgt catcaatctc atggtgaacg gcgtgcaggc
      481 gatggagccc gtgaccgacc ggccgcggcg tctggtgatc cggtccttcg cgcaggccga
      541 cgacgtcgtc gtcgccgtag gcgattccgg cgttggcatc gatcccgccg acatgaatcg
      601 cctgttcaat gcctttttca cgaccaaaac cgacggcatg ggcatgggat tgtcgatctg
      661 ccggtcaatc atcgaatccc atggaggacg catatgggca tcgagcaacg gaggcccggg
      721 aatgaccttc caattcgcct tgcctctcag agccgaggac gcctcatgag ccgccccccg
      781 cagccgccgg gcacggccaa ggcccagccg atcgtgttcg tcgtcgacga cgatccatcg
      841 gtgcgcgagg cattgggcag cctgttccgc tcggtcggcc tgcaggtcga acttttcggc
      901 tcggcggcag aattcctgca gcgcaagcgg cccgacggcg cgagctgcct ggtgctcgac
      961 atcaggctgc cgggcgtgag cggcctcgac ttccagggcc agctcgtcaa ggcgaacatc
     1021 cgcacgccga tcatcttcat gaccggccac ggcgacatcc cgatgtcggt gcgcgccatg
     1081 aaggccggcg ccgtcgactt cctggccaag cctttccgcg accaggacat gctggacgcg
     1141 gtggcggccg ccatccagcg cgaccagcag gcccgcgaag ccgagcaggc cgcggcagtg
     1201 ctgcgcacgg cctacgaatc gctcacggcg cgcgagcgcg aggtgatggc gttggtcacc
     1261 tccgggctga tgaacaagca ggccgccggc cagcttggcc tcagcgagat cacggtcaag
     1321 atccatcgcg gccaggcgat gcggaagatg aaggcaaaat ccctcgccga cctggtgagg
     1381 atggccgaaa gcctggggct tcatcagccg aaggcgcaca catcctaaac gtccgtatga
     1441 tgtcgggagc agcgtcaatc gggcattctg ttgcccaatc gatcgcgcgc gtcacatcgt
     1501 gatcgcgacc gccaccggag gatcggccct ttgtcgagcg ccgccaagat ctctattgtc
     1561 gacgacgacg agtcggttcg cgccgcaatg agcagcctcg tccgctcgct gggctaccaa
     1621 gcctgcgagt tcgcctcggc cgaagctttc ctcgcctcgc cccatctgca ggacacgtcg
     1681 tgcctgatcg ccgacgtcca gatgccggga atgaacgggc tggagctgca ggacgcactg
     1741 cttgcccgcc agcagggcgt gccgatcatc ttcatcaccg cctttcccgc ggaccggatc
     1801 cgccaacgcg ccgaggcggc aggcgccgcg ggcttcttca gcaaacccgt cgacagccaa
     1861 atgatcatcc gctgcctcga cagcgcgttg accaggcgtg aacgccgggc aggccaagcc
     1921 tgcccgtgaa acgcatcacg cccaccatcg cggcccggct ggcgtcgatc gccgccattt
     1981 tgctggccgt cacggcagcg ctcgcctttg ccgggggtgt gttctcgccg ggacggctcg
     2041 ggcccggcgc catcgtcgac gccctgcagg tccatgacgg cctgcatccc ggtttccgcc
     2101 gcgcccatgc caagggcctc tgcatcgcag gcaccttcca gtccaatggc aacggaacgg
     2161 cgctgtccaa agcccaggtt tttgcgcccg gcaccgttcc ggtgatcggc cggttctcga
     2221 ccggcggcgg ccaaccctat gcgcccgacg gcc
//
LOCUS       DASWGA010000003         1995 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1518903, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000003 DASWGA010000000
VERSION     DASWGA010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1995
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1518903"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VF991_00065"
     CDS             complement(<1..308)
                     /locus_tag="VF991_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554852.1"
                     /translation="MNKTSLAVAAIAVTGVSLALSALGQTDDSKLGKVHFETSCKPEA
                     QKLFDRGMLYQHSFWYRASQKTFEDVLKADPECAIAYWGIALSLLWNPHSAPAAKNLA
                     "
     gene            complement(704..1882)
                     /locus_tag="VF991_00070"
     CDS             complement(704..1882)
                     /locus_tag="VF991_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9554853.1"
                     /translation="MNAKPRGHQFFNNPGPTNIPDRVLRAMDRPVLDFMSDEFLAIHH
                     ACHAGVKRVLKTDQTLYMYNASGHGAWEAALANLFAAGDTVLIIETGYFSQSWSEMAV
                     NLGIKVETLAADWRKGADISRLAERLAKDKAHEIRAVLTVHNETATGMVLPVADIRRA
                     MDEAKHPALLLSDTISSLASMEYKMDAWGVDVTVGGSQKGLMLPTGMSLTGVSSKALD
                     ASRKNKAPRHYWSWELMNGRAPQKFMGTAPVHMFFGLQESLKMLEEEGLDAVFQRHTR
                     LGEATRAAVRAWGADGKGPQLFCQTPDRLSNSVTTVMMPEGVSSDPMRKVAIDRFNLS
                     LGGGLGPLMGKVFRIGHLGDLNEPMLLGCLATTELAMKTADVPFAPGGVDAAIESLAS
                     "
BASE COUNT          331 a          615 c          659 g          390 t
ORIGIN      
        1 tcggcgaggt tcttcgccgc cggtgcacta tggggattcc acagcagact gagcgcaatg
       61 ccccaatagg cgatggcgca ctcgggatcg gccttcaaca catcctcgaa ggttttttgc
      121 gaggcgcgat accagaacga gtgctgatag agcatgccgc ggtcgaaaag cttctgcgct
      181 tccggcttgc atgatgtctc gaagtgcact ttgcccagct tgctgtcgtc ggtttgcccg
      241 agggccgaca gggcgagcga aacgccggtc actgcaatgg cagcgacggc caatgacgtt
      301 ttgttcatga tcctggtcct ggttgggttc gaaccgaact cggcgcggtc atcgcttggt
      361 ctgaaggagt gagcgggtct gcccgacgtg ccggacccgc agagcttgag agttgacgat
      421 actctacgct ggcgcagcgg gtgtggcgct tgtcacactc aatacgcgct ttccggcagt
      481 cggcgtagag gttctctacc ggcaggatag gccgatcttc acggttatcg gaaggtcaca
      541 ggggcccggc cggcctcggc gcgcgcccgt agcgcttcat ttgtcatcct gagcgcagcg
      601 aaagatctaa tggcgtcgac ggcggtgaga tccttcgctg cgcttcaggg cgggggttac
      661 cccgcccgcg ataacagatt agctggcctg tggtctggtg acgctagctc gccagcgatt
      721 cgatcgcggc gtcgacgccg cccggcgcga acggcacgtc tgccgtcttc atcgccagct
      781 cggtcgtggc gaggcagccc agcagcatgg gctcgttgag gtcgcccagg tgtccaatac
      841 ggaacacctt acccatcagc ggacccaatc cgccgcccag cgacaggttg aagcgatcga
      901 tcgcgacctt gcgcatggga tcggagctga ctccctcggg catcatcacc gtcgtcaccg
      961 aattggagag ccggtcgggg gtctggcaga agagctgcgg gcccttgccg tcggcgcccc
     1021 aggcgcgcac ggcggcgcgc gtcgcttcgc ccaggcgcgt gtggcgctgg aacaccgcat
     1081 cgaggccttc ctcttccagc attttcagcg attcctgcaa gccgaagaac atgtgcaccg
     1141 gcgcggtgcc catgaatttc tgcggcgccc ggccgttcat cagttcccag ctccaatagt
     1201 gccgcggcgc cttgttcttg cgcgacgcgt cgagcgcctt gctgctgacg ccggtcagcg
     1261 acatgccggt cggcagcatc aggcccttct ggctgccgcc cacggtcacg tcgacgcccc
     1321 aggcatccat cttgtattcc atggaggcga gcgaagagat ggtgtcggac aagagcaaag
     1381 ctggatgctt ggcctcgtcc atggcgcgcc ggatgtcggc caccggcagc accatgccgg
     1441 tcgcggtctc gttgtggacg gtgagcacgg ccctgatctc atgcgccttg tccttggcca
     1501 ggcgctcggc gagccgggag atgtcggcgc ccttgcgcca gtcggcggcg agggtctcga
     1561 ccttgatgcc gagattgacc gccatctccg accagctctg cgagaagtag ccggtctcga
     1621 tgatcagcac ggtatcgcca gccgcgaaca ggttggccag cgccgcttcc cacgcgccgt
     1681 ggccgctcgc gttgtacata tagagggtct ggtcggtctt caggacccgc tttacgccgg
     1741 catggcaggc gtggtggatg gccaaaaact cgtccgacat gaaatccagg accggccggt
     1801 ccatcgcccg cagcacgcgg tcgggaatgt tggtcgggcc gggattgttg aagaactggt
     1861 gtccgcgcgg cttggcattc acgttttggg ctccggtctg cgaaaagtgc cggaacttag
     1921 gggcgcaccc ttggcgaagc aagcgaggct tgcgatggtg ggccattagt taggtgaggg
     1981 cttggatgac tgttc
//
LOCUS       DASWGA010000004         1800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1898844, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000004 DASWGA010000000
VERSION     DASWGA010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1898844"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..826
                     /locus_tag="VF991_00075"
     CDS             <1..826
                     /locus_tag="VF991_00075"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF002872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HEX9554854.1"
                     /translation="FPMSDGSLKDRSGEMLDGLASLGLDGLIGVGGDGSLDILRRLLA
                     PCGIAFIGVPKTIDNDVCNTELAIGYSTAVAVATEALDRLQPTGASHARIMVLEVMGR
                     DAGHIAIAAAIAGGADVVLIPEVRWRLDNVVARIAGLRAAGHTSALVVVAEAAGQVDE
                     AADPASDAPTNGVGDWLARRLMAATGAEARATVLGHVQRGAMPTAEDRLLGAALGVRA
                     VDLLADGKADRMVAWWNRQVIDVPLEEVVGRSCTVDRGGTLIRTARALGICLGDTT"
     gene            complement(1134..>1800)
                     /gene="prmB"
                     /locus_tag="VF991_00080"
     CDS             complement(1134..>1800)
                     /gene="prmB"
                     /locus_tag="VF991_00080"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEX9554855.1"
                     /translation="LIDARVSLRLPSPYLVGAAYMHGVRFHADRRALIPRSFIGDMLA
                     DGVLPIGDAGKIKRVLDLWTGSGCLAILAALAFPRARIDASDLSAGALALARRNVKSH
                     RLGDRIALHRGDLFAPLAGQRYDLIISNPPYVDAKAMARLPTEYRHEPRLALAAGDDG
                     LAVLRRILADAPRYLAKNGALLCEIGRGQKPLEATFPRLPFLWLDTEQSTGEVFWIAA
                     DQL"
BASE COUNT          318 a          572 c          636 g          274 t
ORIGIN      
        1 cttcccgatg tccgacggca gcctgaagga ccgttcgggc gagatgctgg acggcttggc
       61 gagcctcggc ctcgatgggc tgatcggcgt cggcggcgac ggcagcctcg atatcctgcg
      121 ccgcctgctg gcgccttgcg gcatcgcgtt catcggcgtc cccaagacca tcgacaacga
      181 cgtctgcaac accgagctcg ccatcggcta ttcgacggcc gtcgccgtcg ccaccgaggc
      241 gctcgatcgc ctgcagccga ccggcgccag ccatgcgcgg atcatggtgc tggaagtgat
      301 gggccgcgat gccggccaca tcgccatcgc cgccgccatt gccggcggcg ccgacgtggt
      361 tctgatcccg gaggtgcgct ggcggctgga caacgtggtg gcgcgaatcg cgggcctgcg
      421 cgccgccggt catacctcgg cgctggtcgt ggtggcggaa gcggctggcc aggtcgacga
      481 ggcggccgat cccgccagcg atgcccccac caacggcgtc ggcgactggc tcgcccgccg
      541 gctcatggcg gcgacgggcg ccgaagcgcg cgccaccgtg ctgggtcacg tccagcgcgg
      601 cgcgatgccg acggccgaag accggctgct cggcgcggcg ctgggcgtgc gcgcggtcga
      661 ccttctggcc gacggcaagg ccgaccgcat ggtggcgtgg tggaaccgcc aggtgatcga
      721 cgtgccgctc gaggaagtgg tcggccgctc gtgcaccgtc gaccgcggcg gcaccctgat
      781 ccggaccgcc cgggcgctgg ggatttgttt gggcgatacg acttagacca acgcactacc
      841 cccagaccag tattacttac gtacccgcga atttatactg gactttcgtt aaagacaagg
      901 ctaccatcgt cggcgcggtg cgagggcgct cgacgtcatt ggccatcaag agcgtttgcg
      961 ggaaatgtcg aaattgaaaa aggggtagcg ggaagtgcgg aaaccttcaa gaaactgtca
     1021 caataaagaa aaggccaata tcgtcggctt ttcgcgagag agagttcgac acttttggtc
     1081 aggcgaaaaa cgctagcgga gtagcgggag gtgcggaaac cttcaacaaa ctgtcacaat
     1141 tggtcggcgg cgatccagaa cacctcgccc gtgctctgct cggtatcgag ccagaggaag
     1201 ggcaggcgcg ggaaggttgc ttccagaggc ttctggccgc ggccgatctc gcagagcagc
     1261 gcaccgttct tggcgaggta tcgtggcgca tcggccagga tgcggcgcag cacagcgagt
     1321 ccgtcatcgc ccgcggccaa cgccagtctc ggctcatgac gatactcggt tggcaggcgc
     1381 gccatggcct tggcatcgac atagggcgga ttgctgatga tgaggtcgta gcgctggccg
     1441 gccagcggcg caaacaagtc gccgcgatga agggcgatgc gatcgcccaa ccgatggctc
     1501 ttcacattgc gccgtgccaa ggcgagcgcg ccggccgaaa gatcgctggc gtcgatgcgg
     1561 gcccgcggga aggcgagcgc cgccaggatg gcgaggcagc ccgagccggt ccagagatcg
     1621 agcacgcgct tgatcttgcc ggcatcgccg atcggcagca cgccgtccgc cagcatgtcg
     1681 ccgatgaagg agcgcgggat cagcgcccgc cggtcggcgt ggaagcgcac gccgtgcatg
     1741 taggccgcgc cgacgagata aggcgagggc agacgcaggc tcacgcgggc gtcgatcagg
//
LOCUS       DASWGA010000005         3068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1013031, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000005 DASWGA010000000
VERSION     DASWGA010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3068
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013031"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VF991_00085"
     CDS             complement(<1..212)
                     /locus_tag="VF991_00085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008933994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX9554856.1"
                     /translation="MKIATWNVNSVRKRTGNLVAWLQHAKPDVVVLQEIKAQEAQFPR
                     LEVEAAGYKTEIVGQKGFNGVALLSL"
     gene            complement(223..555)
                     /gene="erpA"
                     /locus_tag="VF991_00090"
     CDS             complement(223..555)
                     /gene="erpA"
                     /locus_tag="VF991_00090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEX9554857.1"
                     /translation="MSETPFSVSESAARRIAFLAAKEARPVMMRVAVLGGGCSGFQYN
                     FSFEDERHEDDLVIERNGAAVLVDSTSLELLKGSQLDYVEEMVGSSFQVKNPNATSSC
                     GCGNSFSV"
     gene            complement(587..997)
                     /locus_tag="VF991_00095"
     CDS             complement(587..997)
                     /locus_tag="VF991_00095"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HEX9554858.1"
                     /translation="MTSRQAVEDFYNRIWNRLDRTAIAELLHPEVTFRGSLGEAMTGH
                     AAFAAYVDRVTGALADYHCTILDLVSEGDRAFARMRFEGIHRGPFLGFAPTGRQVDWA
                     GAALFTLKSDKIADLWVLGDLYGLRRQLQRNAEH"
     gene            complement(994..1890)
                     /locus_tag="VF991_00100"
     CDS             complement(994..1890)
                     /locus_tag="VF991_00100"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9554859.1"
                     /translation="MSTAPASSALLGIYARVTALVLFSTMDAMVKALGESYGPFQMML
                     FRSTIALVPLYFLFRNAGGLRLVRSNRPVLQVLRIATGFGSLLGFFYIFPRMPLVDAY
                     AISYAAPLFMVGLAAPILGETAGWRRWSAVAVGFAGVLVMLEPWNISVHWLSLVVLAA
                     TFCYSLSTVLTRLISRYDHDAATIFWFCLFASVVSLIGAIPDWKWPAPADWFWLSSLG
                     LIGGVAQILATRALRLAPASILAPFDYSSIGLAVLYGYLWFKEEPSPAVWYGLPLVIG
                     SGLYILHRERVHARQRSMTALT"
     gene            1963..>3068
                     /locus_tag="VF991_00105"
     CDS             1963..>3068
                     /locus_tag="VF991_00105"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE2 domain-containing protein"
                     /protein_id="HEX9554860.1"
                     /translation="MGWLFGRNNVRAPWIVALLVLINALLLRALDPVELTRVRDFAFD
                     SYQRLKPRVYHPATPVRIVDIDEAALAEYGQWPWPRTIVARLVDKLTEKGAAVIAFDV
                     VFAEPDRSSISRMVRDLVAYTDPETVKKLAAAVQDNDQVLADAMAHSRVVLGFGFDLK
                     GGSRPPRRYHGVAFAGDDPAQFLPLQRGAVNSIPLLEAAAKGNGSVNTDPDSAVIRRA
                     PLLFRLAGQEGLFPALSIEALRVAQGASSYLVKSSGASSEMSFGEKTGIVAIKTGDVE
                     VRTDSRGRLVLYDSGHREERFVSARDVLDDKVEPGKLNGHIVFVGTSAIGLKDTRSTP
                     VEDAVPGVEIHAQLAEQMIDQDFLARPDFADGAE"
BASE COUNT          571 a          998 c         1029 g          470 t
ORIGIN      
        1 tgaagcgaca gcagggcgac gccgttgaaa cccttttggc cgacgatctc ggtcttgtag
       61 cccgccgcct cgacctcgag acgcgggaac tgcgcctcct gcgccttgat ctcctgcagg
      121 acgacgacgt ccggcttggc gtgctgcagc catgccacca ggtttccggt ccgcttgcgg
      181 acggaattga cgttccaggt cgcgatcttc atcgcggccg gatcacacgc tgaaggagtt
      241 gccgcaaccg caggacgagg tggcgttcgg gttcttgacc tggaacgacg agccgaccat
      301 ttcctcgaca tagtcgagct ggctgccctt caggagctcc agcgaggtgc tgtcgaccag
      361 caccgcggcg ccgttgcgct cgatcaccag gtcgtcctcg tggcgctcgt cctcgaacga
      421 gaagttgtac tggaagcccg aacagccgcc gcccagcacg gccacccgca tcatcacggg
      481 cctggcttcc ttggcggcca ggaaggcgat gcgcctggcg gcgctctcgg agacggaaaa
      541 cggggtttcg ctcatgtcca caacatgtgg ttggaaggcc ggttcgtcaa tgctccgcat
      601 tgcgttgaag ctgtcggcga agaccgtaca ggtcgcccaa gacccacaga tcggcaattt
      661 tatcactttt cagggtgaag agcgcggcgc ccgcccaatc gacctgccgg ccggtcgggg
      721 cgaagcccag gaaggggccg cgatgaatgc cctcaaagcg catacgggca aaggcgcgat
      781 cgccctcgct gaccaggtcg aggatcgtgc aatggtagtc ggccaaggcg ccggtcaccc
      841 tgtcgacata agcggcaaag gccgcgtggc ctgtcatggc ctcgccgagc gagccgcgga
      901 aagtgacctc cggatggagc agctcggcga tcgccgtcct gtcgaggcgg ttccagatgc
      961 ggttgtaaaa gtcttcgacg gcctgccggg aagtcacgtc aaggccgtca tgctgcgctg
     1021 ccgggcgtga acccgctcgc ggtggagaat gtagagcccc gagccgatga ccagcggcag
     1081 gccataccag accgccggcg aaggctcctc cttgaaccac agatagccat agaggacggc
     1141 gagcccgatc gaactgtagt cgaagggcgc caggatcgac gccggcgcga ggcgcagcgc
     1201 gcgcgtggcc aggatctggg cgacgccgcc gatgagaccg agcgagctca gccaaaacca
     1261 gtcggccggc gccggccatt tccagtcggg gatcgcgccg attagcgaaa ccacgctggc
     1321 gaacaggcag aaccagaaga tcgtcgcggc atcgtggtcg tagcggctga tcaggcgcgt
     1381 gagcacggtc gacagcgaat agcagaaggt cgccgccagc acgaccagcg agagccagtg
     1441 gaccgatatg ttccacggct cgagcatgac cagcacgccc gcgaagccga cggcgacggc
     1501 gctccagcgt cgccagcccg ctgtttcgcc caggatcggg gcggcaagcc cgaccatgaa
     1561 caggggtgcg gcgtaggaga tcgcgtaggc gtcgaccagg ggcatgcgcg gaaagatgta
     1621 gaagaagccc aacaggctgc caaagccggt ggcgatgcgc agcacctgca ggaccggccg
     1681 gttgctgcga accaggcgaa ggccgccggc gttccggaac aggaaataaa gcggcaccaa
     1741 cgcaatggtg ctgcgaaaca gcatcatctg gaacggtccg taggattcgc ccagcgcctt
     1801 caccatggcg tccatcgtcg agaacaggac gagtgcggtg acccgggcat agatgccgag
     1861 aagggcggaa gaggcaggcg cggtcgacaa ggtgcgctat ttggcttggc gcgcatcctt
     1921 ccgtaaagtg acgttcgcag gagggccagg cgacgaatgc gcatgggttg gttgttcggc
     1981 cgcaacaacg tgcgtgcgcc gtggatcgtg gctctgctcg tgctgatcaa cgcgctgctg
     2041 ctgcgcgcgc tcgatcccgt cgaactcacc cgcgtgcgcg atttcgcctt cgacagctac
     2101 cagcgcctga aaccccgcgt ctatcatccg gccacgccgg tgcgcatcgt cgacatcgac
     2161 gaggcggcgc tggccgaata cggccagtgg ccgtggccgc gcacgatcgt ggcgcgcctg
     2221 gtcgacaagc tcaccgaaaa gggcgccgcc gtcatcgcct tcgacgtggt gttcgccgag
     2281 cccgaccggt cgtcgatcag ccgcatggtc cgcgatctgg tggcttacac cgaccccgag
     2341 accgtgaaga agctcgcggc ggcggtgcag gacaacgacc aggtcctggc cgacgccatg
     2401 gcgcattcgc gcgtcgtgct gggcttcggt ttcgacctca agggcggctc ccggccgccg
     2461 cggcgctatc acggcgtcgc cttcgccggc gacgatccgg cccagttcct gccgctgcag
     2521 cgcggggcgg tgaactcgat cccgctgctc gaggccgccg ccaagggcaa cggcagcgtc
     2581 aacaccgacc ccgacagcgc ggtgattcgc cgggccccgc tgctgtttcg cctcgccggc
     2641 caggaaggcc tgttccccgc cttgtcgatc gaggcgctgc gggtcgccca gggcgccagc
     2701 agctacctcg tcaaatcgtc gggcgccagc agcgagatgt cattcggcga aaagacggga
     2761 atcgtcgcca tcaagaccgg cgacgtcgag gttcgcaccg attcaagagg ccggttggta
     2821 ctctatgaca gcggtcaccg cgaggaacgc ttcgtctcgg cgcgcgacgt cctcgacgac
     2881 aaggtggagc cgggaaagct caacggccat atcgtgttcg tcggcaccag cgccatcggg
     2941 ctgaaggaca cgcgcagcac cccggtggaa gacgccgttc ccggggtcga gatccatgcc
     3001 cagctcgccg agcagatgat cgaccaggac ttcctggccc gcccggattt cgccgatggc
     3061 gcggagtt
//
LOCUS       DASWGA010000006         2760 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1013371, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000006 DASWGA010000000
VERSION     DASWGA010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013371"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1061)
                     /locus_tag="VF991_00110"
     CDS             complement(<1..1061)
                     /locus_tag="VF991_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEX9554861.1"
                     /translation="MTDRLKVALAQLNPKVGDVDGNLAKVRAARAEAKNQGAELVLTS
                     ELVLAGYPPDDLVLKPAFQRRCQEAVEALRADTQDGGPALFVGAPWREDDKLHNAVIC
                     LDKGEIIGKRYKVDLPNYGWADDKRWFAPGPMPGPLVFNGVRIGVPICEDVWTADVVE
                     CISETGGEILLVPNGSPYEVGKTDVRVQLGVSRVVESGLPFVYLNQVGGQDELVFDGG
                     SFALGADRALKVKLASFREQVATVEFRRGSDGWECQPGPIAPELSDIESIYQAMMLGL
                     RDYVNKTGFPSVVIGLSGGVDSALTAAVAADALGPGRVQTLMMPSPYTSAHSLEDAKA
                     CADAIGVRYDIVSIEPAMEA"
     gene            complement(1064..1588)
                     /locus_tag="VF991_00115"
     CDS             complement(1064..1588)
                     /locus_tag="VF991_00115"
                     /inference="COORDINATES: protein motif:HMM:NF023363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3455 domain-containing protein"
                     /protein_id="HEX9554862.1"
                     /translation="MISEGGNAMQRIACWAAAFVAIAGVAHAADELVPPPQGASLLLE
                     VAADGVQVYVCEAKDQGFTWTFKAPEANLFDKQGLQVGTHFAGPTWKIGDGAVIGEVA
                     ARADAPAGGAIPWLLLRAKRNEGSGVLSTVAFIRRVDTKGGIAPASGCDAAHSGAQAR
                     VRYYAAYQFFGAAK"
     gene            complement(1585..1971)
                     /locus_tag="VF991_00120"
     CDS             complement(1585..1971)
                     /locus_tag="VF991_00120"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX9554863.1"
                     /translation="MAIKFHNPTSVSVAGKYSLGAEVPPNARLFYVSGQVGVDSRGKL
                     QAGIDKQVEQVWKNIAQVLKSAGMGYRDVVKVNVFLTDSRFIGPYRTIRDRFFSEPPY
                     PASTLLVVAGLADPGMLVEVEVVAAK"
     gene            2027..>2760
                     /gene="trmFO"
                     /locus_tag="VF991_00125"
     CDS             2027..>2760
                     /gene="trmFO"
                     /locus_tag="VF991_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HEX9554864.1"
                     /translation="MTSSDKAVHIVGGGLAGSEAAWQIAQAGVPVVLHEMRPVRGTEA
                     HLTDALAELVCSNSFRTDDANNNAVGLLHEEMRRASSLIMRAADAHKLPAGGALAVDR
                     HGFSAAVQQALLGHPLVELRREEVAGLPSEAWDSVIVATGPLTSPDLAAAIAKLTGED
                     SLAFFDAIAPIVHYESIDLSIAWKQSRYDKGGPAGDGADYLNCPLDKEQYDAFVAALL
                     AGDKTEFKQWEHNTPYFSGCQPIEVIA"
BASE COUNT          456 a          968 c          896 g          440 t
ORIGIN      
        1 gcttccatcg cgggctcgat gctgacgatg tcgtagcgca cgccgatcgc gtcggcgcag
       61 gccttggcat cctccagcga atgcgcactg gtatagggcg acggcatcat cagcgtctgc
      121 acgcgcccag gccccagcgc atcggccgcc accgccgccg tcagcgccga atcgacgccg
      181 cccgacaggc cgatcaccac cgacgggaag cctgtcttgt tcacgtaatc gcgcaggccc
      241 agcatcatcg cctggtagat cgattcgatg tcgctcagct ccggcgcgat cgggcccggc
      301 tggcattccc agccatccga tccgcggcgg aactcgaccg tcgccacctg ctcgcggaac
      361 gaggcgagct tgaccttgag cgcgcggtcg gcccccagcg cgaacgagcc gccgtcgaac
      421 accagctcgt cctggccgcc cacctggttg aggtagacga agggcaggcc gctctcgacc
      481 acgcggctca cgccgagctg cacgcgcaca tcggtcttgc cgacttcgta gggcgagccg
      541 ttgggcacca gcaggatctc gccgccggtc tcggagatgc attccacgac atcggccgtc
      601 cacacgtcct cgcagatcgg cacgccgatg cgcacgccgt tgaagaccag cggtccgggc
      661 atcggaccgg gggcgaacca gcgcttgtcg tcggcccagc cgtaattcgg caggtcgacc
      721 ttgtagcgct tgccgatgat ctcgcccttg tcgaggcaga tgacggcatt gtggagcttg
      781 tcgtcctcgc gccacggcgc gccgacgaaa agcgccggcc cgccgtcctg ggtgtctgca
      841 cgcagcgcct cgaccgcctc ctggcaacgc ctctggaagg cgggcttcag caccaggtcg
      901 tcgggcggat agccggccag caccagctcc gaggtcaata ccagctcggc gccctggttc
      961 ttcgcttcag cgcgcgccgc ccgcaccttg gccaggttgc cgtcgacgtc gccgaccttg
     1021 gggttgagct gggccagcgc gactttgagg cggtccgtca ttgctacttc gcggcgccaa
     1081 agaactggta ggccgcgtaa tagcggacgc gagcctgtgc gccgctgtga gcggcatcgc
     1141 agcccgatgc cggcgcgata ccgcccttgg tatccacccg acggatgaag gccacggtcg
     1201 acaagactcc cgatccctca ttgcgcttgg cgcgcagcag cagccatggg atcgcgccgc
     1261 cggccggcgc atcggctctc gcagcgactt caccgatgac ggctccgtcg ccgatcttcc
     1321 aggtcggccc ggcgaaatgg gtgccgacct gcaggccctg cttgtcgaac agattggcct
     1381 ccggcgcctt gaaggtccac gtgaagccct ggtccttggc ctcgcagaca tagacctgga
     1441 cgccgtcggc agcgacctcg agcagcaggg acgcgccttg cggcggcggc accaactcat
     1501 ccgccgcgtg agcgacacca gcgatggcaa cgaacgcggc ggcccagcag gcaatccttt
     1561 gcatggcgtt tcctccttcg gagatcactt ggccgccacc acctcgactt cgaccagcat
     1621 gccgggatcg gccaggcccg ccaccacaag caaagtcgat gctggatagg gtggctcgct
     1681 gaaaaagcga tcgcgtatcg tgcgataggg cccgatgaag cggctgtcgg tcaggaagac
     1741 gttgaccttg acgacgtcgc gatagcccat gccggcgctc ttcagcacct gggcgatgtt
     1801 cttccacacc tgctcgacct gcttgtcgat gccggcctgc agcttgccgc gcgaatcgac
     1861 gccgacctgg cccgagacgt agaacagcct ggcgtttggc ggcacctcgg cgcccaggct
     1921 gtacttgccc gccaccgaga cggacgtggg attgtggaac ttgatggcca tgagctttac
     1981 ccccatctaa gactatcgaa ccgtcacaag agcatggtcg ggtgggatga cgtcaagcga
     2041 caaggcggta cacatcgtcg gcggtggcct cgcgggctcg gaggcggcgt ggcagatcgc
     2101 gcaggccggc gtgccggtgg tgctgcacga gatgcgcccg gtgcgcggca ccgaggcgca
     2161 cctgaccgac gccttggccg agctggtgtg ttccaactcc ttccgcaccg acgatgccaa
     2221 caacaacgcc gtcggcctgc tgcacgagga gatgcggcgc gcgagctcgc tgatcatgcg
     2281 cgcggccgac gcccacaagc tgccggcggg cggcgcgctt gccgtcgacc gccacggctt
     2341 ctcggcggcc gttcagcagg cgttgctcgg ccatccgctg gtcgagctgc ggcgcgagga
     2401 agtcgcgggc ttgccatccg aggcgtggga cagcgtgatc gtggccaccg gtccgctcac
     2461 ctcgcccgac ctggccgcgg cgatcgccaa gctgaccggc gaggactcgc ttgccttctt
     2521 cgacgccatc gcgcccatcg tgcactacga gagcatcgat ctttcgatcg cctggaagca
     2581 gtcgcgctac gacaagggcg ggccggccgg cgacggcgcg gactatctca actgcccgct
     2641 cgacaaagag cagtacgacg ccttcgtcgc ggcgctgctg gccggcgaca agaccgagtt
     2701 caagcagtgg gagcacaaca cgccctactt cagcggctgc cagccgatcg aggtgatcgc
//
LOCUS       DASWGA010000007         3566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2025777, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000007 DASWGA010000000
VERSION     DASWGA010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3566
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2025777"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..691
                     /locus_tag="VF991_00130"
     CDS             <1..691
                     /locus_tag="VF991_00130"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HEX9554865.1"
                     /translation="STGPGLRTIVMQDAENFLRQAETMKDSSHLKDGGNPALRHLLAV
                     RHEINAVAKGLSERLRAAPTPAHAYAQDLLLGRQFDLATRVVTARVPVVAVKTALGGF
                     DTHANQVQVHERLLAFLATSLATLRRNLIAAELWNDVVVMTYSEFGRRAKQNASAGTD
                     HGTAAPLFVMGGGVKGGLYGAYPSLGDLQDGDLKHTVDFRSVFATAAQGCWGLQRDFG
                     LRQPHKLGFLT"
     gene            complement(764..2071)
                     /locus_tag="VF991_00135"
     CDS             complement(764..2071)
                     /locus_tag="VF991_00135"
                     /inference="COORDINATES: protein motif:HMM:NF024742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9554866.1"
                     /translation="MIAYSTLQLPLAMAALPVVLNVSHFYGEVLKLSLQIMGPIFIFA
                     RVVDAIQDPVIGLISDRFTRRGKRGRLTFVALMIPVLVGGFFMLFDPPTAWAGNQTMT
                     AAWLVAALLLVHLGYSGVSISYHAHGAELTDDYNERTKVTVGREVFGLLGMTLAVVLP
                     TFLTYRFGDTDGYMTLGLLFLPIALLFSMPTLLWAGPSVHPPVIHTERNPFVPFFAPL
                     KNRLFRRLLLVFVVNGAALGVAVTVMLFYVEHVLKGNKLQAGIILLTYFIAGAASVPL
                     WLMLSKRTSKAAAWFVGMVMTAIAMACAILIGPGDFYWFLAISVITGLGIGADYGLPP
                     SILADVINSTEGGDSRGKTGTYFGLWALATKLATAIGAAGSLPVAAMLGFNPARGQYG
                     TTALIVAYIVLPVLIKIIAALLIWFIRIEAERGSVKDELMARS"
     gene            complement(2181..3353)
                     /locus_tag="VF991_00140"
     CDS             complement(2181..3353)
                     /locus_tag="VF991_00140"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEX9554867.1"
                     /translation="MTLAAHFVLKALDRLSIGRLAVRLPDGSTRLFGRSDGEPSADIE
                     VKDWRFFRRVLLDGDIGFAEAYMDGFCESSDLPGLIALLADNEKALGGVARSNLVHGL
                     LLKLVHRRRDNSRAGSRKNIHAHYDLGNEFYDLWLDRSMSYSSALYDGDRDKPLEAAQ
                     TAKYERVLDRIGARQGDSILEIGCGWGGFAEIAARRGMRVTGVTISGKQLEFARQRLQ
                     RAGLADRVDLQFRDYRDIEGRYDHIVSIEMVEAVGERYWPDYFAALRRHVAPGGSALV
                     QAIVIADELFDAYRHRPDFVQTHVFPGGMLLSPASLREQCRLAGLRIAELYSFGLDYA
                     RTLETWLGRFDRVADQVAKLGFDERFRRMWRYYLAYCAAGFATRRTDVLQAHFRHI"
     gene            complement(3369..>3566)
                     /locus_tag="VF991_00145"
     CDS             complement(3369..>3566)
                     /locus_tag="VF991_00145"
                     /inference="COORDINATES: protein motif:HMM:NF018770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1365 family protein"
                     /protein_id="HEX9554868.1"
                     /translation="GLMLATSVGGRRQALSDATVLRRFLGNPTMTLGVIVRIHWQALH
                     LWRKRARFYRKPAPPPEFVTR"
BASE COUNT          653 a         1154 c         1209 g          550 t
ORIGIN      
        1 cagcaccggc cccggcctgc gcaccatcgt catgcaggac gccgagaact tcctgcgcca
       61 ggccgagacg atgaaggact cgagccacct caaggacggc ggcaacccgg ccttgcgcca
      121 tcttctggcg gtgcgccacg agatcaatgc cgtggccaag ggcttgagcg agaggctgcg
      181 cgcggcgccg acgccggctc atgcctatgc ccaggacctg ctgctcggcc ggcagttcga
      241 tctcgccacc cgcgtggtca cggcgcgcgt gccggtggtc gccgtcaaga ccgcgctggg
      301 cggcttcgac acccatgcca accaggtcca ggtgcacgag cggctgctgg ccttcctggc
      361 gacaagtctc gccacgctgc gcaggaacct gatcgccgcc gagctgtgga acgacgtcgt
      421 ggtgatgacc tattccgagt tcggccggcg cgccaagcag aatgccagcg ccggcaccga
      481 tcacggcacg gcggcgccgc tgttcgtcat gggcggcggc gtcaagggcg ggctttacgg
      541 cgcctatccg tcgctcggcg acctgcagga cggcgatcta aaacacaccg tcgatttccg
      601 cagcgtcttc gccacggcag cacaaggctg ctggggcctg cagcgcgatt tcggcctgcg
      661 ccagccgcat aagctcggct tcttgactta gctgtcttcc ggaccgcgcg catcttgcgc
      721 gctcatgatc atgaggcgag cgagacgctc gcggtccgga agattaagac cgtgccatca
      781 attcgtcctt caccgagccg cgttcggcct cgatgcggat gaaccagatg agcaacgcgg
      841 cgatgatctt gatcagcacc ggcagcacga tataggcgac gatcagcgcc gtggtgccgt
      901 attggccgcg cgccgggttg aagcccagca tcgccgccac cggcagcgag cccgccgcgc
      961 cgatcgccgt ggcgagcttg gtggcgagcg cccacaggcc gaaataggtg ccggttttgc
     1021 cgcgcgaatc gccgccctcg gtcgagttga tgacatcggc caggatcgac ggcggcaggc
     1081 cgtagtcggc gccgatgccg aggccggtga tcaccgagat ggccaggaac cagtagaagt
     1141 cgccgggacc gatcaagatc gcgcaggcca tggcgatcgc ggtcatgacc atgccgacga
     1201 accaggcggc ggccttgctc gttcgcttcg acagcatcag ccacaacggc acgctggcgg
     1261 cgccggcgat gaaataggtc agcaggatga tgccggcctg gagcttgttg cccttcagca
     1321 cgtgctcgac atagaaaagc atcaccgtca cggcgacgcc gagtgccgcc ccgttgacga
     1381 cgaagaccag cagcaggcgt cggaacagcc ggttcttgag cggcgcgaag aacgggacaa
     1441 aggggttgcg ctcggtgtgg atcaccggcg gatggaccga cggtccggcc catagcagtg
     1501 tcggcatgct gaacagcagg gcgatgggca ggaacagcag gccgagcgtc atgtagccgt
     1561 cggtgtcgcc gaaccgatac gttaggaagg tcggcagcac cacggctaag gtcatgccga
     1621 gcaggccgaa cacctcgcgg ccgaccgtga ccttggtgcg ctcgttgtag tcgtcggtca
     1681 gctccgcacc atgagcgtga tagctgatcg acacgccgga atagccgaga tggaccagca
     1741 acagtgctgc gaccagccag gccgccgtca tcgtctggtt gccggcccaa gcggtgggcg
     1801 ggtcgaacag catgaaaaag ccgccgacca gcacggggat catcagcgcc acgaaggtga
     1861 gccgcccgcg cttgccgcgg cgggtgaagc ggtcgctgat caggccgatc accggatcct
     1921 ggatggcgtc gaccacacgg gcgaagatga agatcggccc catgatctgg agcgacagct
     1981 tcagcacctc gccgtagaaa tggctgacgt tcaagacgac cggcagcgcc gccatggcga
     2041 gcggcaactg cagggtcgaa taggcgatca agcggtcgaa tttgattttg acgggtacgc
     2101 cgctcgcgtt cccgttcggt cctacattca cccgtcggcc ttcctgttga cgccgttttc
     2161 ggcgccgttg ttgccgaccc ttatatatgc cggaagtgcg cctgcaaaac gtcggtgcgc
     2221 cgggttgcga agccggcggc gcaataggcg agataatatc gccacatgcg gcggaatcgc
     2281 tcgtcgaagc cgagtttggc cacctggtcg gcgacccggt cgaagcggcc gagccaggtt
     2341 tccagggtgc gggcatagtc cagcccgaaa ctgtagagct cggcgatcct caagcccgcc
     2401 agcctgcatt gttcgcgcag gctggccggc gacagcagca tgccgccggg aaagacatgg
     2461 gtctgaacaa agtccggacg atggcgatag gcgtcgaaca gctcgtcggc gatcacgatc
     2521 gcctggacga gcgccgagcc gccgggcgcg acatggcgcc tgagtgcggc gaagtaatcc
     2581 ggccagtagc gctcgcccac cgcctcgacc atctcgatcg acacgatgtg gtcgtagcgc
     2641 ccctcgatgt cgcgatagtc gcggaactgc aggtcgaccc ggtcggccag gccggcgcgc
     2701 tgcaggcgct ggcgggcgaa ctcgagttgc ttgcccgaga tcgtgacgcc ggtgacacgc
     2761 atgccgcgcc gcgccgcgat ctcggcgaag ccgccccagc cgcaaccgat ttcgaggatg
     2821 ctgtcgccct ggcgggcgcc gatccggtcg aggacgcgtt cgtacttggc ggtttgcgcg
     2881 gcctcgagcg gcttgtcccg atcgccgtcg tagagcgccg acgaatagct catcgagcgg
     2941 tcgagccaca ggtcgtagaa ctcgttgccg agatcgtagt gggcatggat gttcttgcgc
     3001 gagcccgcgc gcgaattgtc ccgccgccgg tgcaccagct tcagcaacag gccatgcacc
     3061 aggttggagc gcgccacgcc gcccagcgcc ttctcgttgt cggccagaag ggcgatcagg
     3121 ccgggcaggt cggacgattc gcagaagcca tccatgtagg cctcggcaaa gccgatatcg
     3181 ccgtcgagca ggacgcggcg gaagaaacgc cagtccttga cctcgatgtc ggccgacggc
     3241 tcgccgtcgc tgcggccgaa caggcgcgtc gaaccgtcgg gaagtcgcac ggccagccgg
     3301 ccaatcgaga gccggtcgag ggctttgagg acgaagtggg cggcgagcgt catgcgtcgg
     3361 aaaggagatc agcgggtcac gaattccggt ggtggcgcgg gcttgcgata aaatctcgcc
     3421 cgctttcgcc acagatgcaa ggcctgccaa tggatccgca cgatgacgcc cagcgtcatc
     3481 gtcggattgc cgaggaagcg gcgcagcacc gtggcgtccg acagcgcctg gcgccggccg
     3541 ccgacggagg tggccagcat cagccc
//
LOCUS       DASWGA010000008         9091 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1140049, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000008 DASWGA010000000
VERSION     DASWGA010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9091
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1140049"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VF991_00150"
     CDS             complement(<1..321)
                     /locus_tag="VF991_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HEX9554869.1"
                     /translation="MTGPRTRAGFAAIVGAPNAGKSTLVNALVGSKVSIVSPKVQTTR
                     MRVIGIAMVDLADDGPGGSRAQLVLVDTPGIFRIAKRRLERAMVAAAWQGADDADLVA
                     LVVDA"
     gene            complement(318..1058)
                     /gene="rnc"
                     /locus_tag="VF991_00155"
     CDS             complement(318..1058)
                     /gene="rnc"
                     /locus_tag="VF991_00155"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR02191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEX9554870.1"
                     /translation="MAAGHPLQSLLHGDPLKASDVDLAALAGKVGHAFTRVELAVEAL
                     THRGTLDRRPDLKAAFPHGNERLEFLGDRVLSLAMADLLLRRFPQEREGQLARRHAAL
                     VSARTLGEIAQAIGLRDHLIGYRGAPPATKAILSDMLEALLGAIFLDAGFEAAAHAIE
                     RLWEERLGSHNPAPRPPKTQLQEWAQARGLALPAYRQVGREGSEHEPVFLVEVRVGSL
                     PAAQGRGQTKRDAESAAASLMLEQLAKP"
     gene            complement(1010..1834)
                     /gene="lepB"
                     /locus_tag="VF991_00160"
     CDS             complement(1010..1834)
                     /gene="lepB"
                     /locus_tag="VF991_00160"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX9554871.1"
                     /translation="MTDVVERRKRGQEKAGGWAETIRTVVYAVLIALVVRTFAIEPFN
                     IPSGSMIPTLLVGDYLFVSKYSYGYSKHSFPFSLGLFSGRIFSHPPERGDVAVFKYPG
                     DQGQGLNRTDYIKRIVGLPGDRIQVTNGVLHINGTPVQRLRIGDYVKGTNGHYQKGTL
                     YSETLPNGRRFTVLEYTDNGMADNTPEFLVPAGNYFVMGDNRDDSLDSRTRLMLRDFS
                     GTPRDRDQLGWYVPAENLVGRAEFIFFSHDPSAAGWLEPWKWPQAIRFSRFFTAIH"
     gene            complement(1941..2342)
                     /gene="acpS"
                     /locus_tag="VF991_00165"
     CDS             complement(1941..2342)
                     /gene="acpS"
                     /locus_tag="VF991_00165"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEX9554872.1"
                     /translation="MIIGIGNDLIDIRRIEKSLERFGNRFVQRVYTETEQKRSDGRAT
                     RAASYAKRFAAKEACAKALGTGLRRGVFWRDMGVVNQRGGKPTLALTGGALARLQEIT
                     PAGMSPQIDLTLTDEYPMAQAIVIISAVPRP"
     gene            complement(2339..3091)
                     /locus_tag="VF991_00170"
     CDS             complement(2339..3091)
                     /locus_tag="VF991_00170"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEX9554873.1"
                     /translation="MPAPHPLRLGVNIDHVATVRNARGGRLPDPLRAARIAEAAGADG
                     ITAHLREDRRHIVDDDIEGLMRELKLPLNFEMAATKEMVDIALRHRPHAACIVPEKRE
                     ERTTEGGLDAAGQHNHLKPMIARLRDAGIRVSLFIEADPRQLEAAVALGAPVVELHTG
                     RYCELEGEPQRAELVRLQKAAALCARLGLECHAGHGLSYADVGPVAAIPEVRELNIGH
                     FLVGEAIFVGLEQAIREMRRVMDAARGGGAAR"
     gene            complement(3198..5375)
                     /locus_tag="VF991_00175"
     CDS             complement(3198..5375)
                     /locus_tag="VF991_00175"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012634323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEX9554874.1"
                     /translation="MIRQFELVERVQSYDPDADEEMLNRAYVYGLKKHGTQLRASGDP
                     YFSHPVEVAGILAEMRLDTSSIVTGLLHDTLEDTDATRDEIAGLFGENIARLVDGVTK
                     LSRLEVQSESTKEAENLRKLVLAMSSDIRVLLVKLADRLHNMRTLGHIKDPVRRKRIA
                     RETMDLYAPLASRIGMENVKRELEELAFAELNPDGRASVLARQGYLRERGERLVPQIE
                     AELVKTLKDGGLAAQVSGREKMPYSIWRKMQTKNVSFEQLADIMAFRIIVADIAQCYQ
                     ALGLLHGRYQVLPQRFKDYISVPKPNGYRSLHTGVIGPLGQRIEIQIRTEEMQDQADR
                     GVAAHWIYKQGGPSTDAPQYAWLRSLIEILDKAPNAEEFLEHTKLEMFQDQVFCFTPK
                     GKLIALPRGATPIDFAYAVHSQVGDTCVGAKINGRMLPLRTQLSNGDQVEIITSKAQT
                     PSPTWERFVVTGKAKAAIRRYIRTRQREQYIQLGRSLLDKSFHEEGYEVTEKGLDGVR
                     ANFKQATTDDLVAAVGAGLLGAREVLTAVYPGLKQPRKPGGADVVPISRARNKAKAAD
                     RSRGKKEAGQIAIRGLIPGMAVHFARCCHPLPGDRIVGIITTGKGVTIHTIDCATLES
                     FSEAPERWIDVGWDSVGESAPGVYTGRLKITVANQPGSLSSLSTVIARHEGNISNLRI
                     VNRSMDFFDMVIDVEVADVKHLADITAALRATPAINAVERARN"
     gene            complement(5563..5877)
                     /gene="rpoZ"
                     /locus_tag="VF991_00180"
                     /pseudo
     CDS             complement(5563..5877)
                     /gene="rpoZ"
                     /locus_tag="VF991_00180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003546928.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
     gene            complement(5960..6475)
                     /gene="folK"
                     /locus_tag="VF991_00185"
     CDS             complement(5960..6475)
                     /gene="folK"
                     /locus_tag="VF991_00185"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:NF013456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEX9554875.1"
                     /translation="MENTDRGTIFIGTGANLPHPTHGSPRRTLEAALDELGRRGVSVL
                     RVSPWYRTAPIPASDQPWYVNAVAEVETALPADRLLAVLHEVEQDFGRVRTVPNAPRA
                     IDLDLLDFRGEIAPGGPGRATLPHPRLQDRAFVLRPLADLAPGWRHPATGLPIQALLA
                     ALPAGQTIERF"
     gene            6620..7258
                     /locus_tag="VF991_00190"
     CDS             6620..7258
                     /locus_tag="VF991_00190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEX9554876.1"
                     /translation="MKGNFYENERVALFIDGANLYSAARALGFDIDYRRLLKVFREKG
                     RLVRAYYYTALVEDQEYSPIRPLIDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIE
                     LAIDVLEMAEHLDHVILFSGDGDFRRLVEAVQRKGLRVSVVSTIKSAPPMVADELRRQ
                     ADDFIELSELAPLIARNPSERAPRPAVAAQFGSRDHDGELDDAPSESLIRSA"
     gene            7272..7922
                     /locus_tag="VF991_00195"
     CDS             7272..7922
                     /locus_tag="VF991_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEX9554877.1"
                     /translation="MAASRFEEPPSDCPRCPRLVAFRHELRAQYPDWQNAPVRSFGDL
                     DARVLIVGLAPGMRGANRTGRPFTGDYAGDLLYSTLLTFGFAQGVYRADPNDGLHLVN
                     CRIANAVRCLPPENKPLPVEFTNCRPFLQAELAVMPNLRVIVALGKGAHDQVLRALTI
                     RPAGAYPFIHGKLHALPTGLSLADSYHCSRYNTNTGRLTTEMFHAVFAGVRKALGS"
     gene            complement(7929..8405)
                     /locus_tag="VF991_00200"
     CDS             complement(7929..8405)
                     /locus_tag="VF991_00200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEX9554878.1"
                     /translation="MASAHDFTFTTIDNKPLDLKAFAGKPVLVVNVASYCGFTPQYTD
                     LQKLHESYGPKGLVVVGVPSNDFGAQEPRTEPEIAKFCESMYGVTFPLTSKQKVIGPD
                     AHALYQWIAQEAGEGAAPKWNFHKYLIGKDGSLLGAWPSRVRPGSSEITEAIEAAL"
     gene            complement(8407..9081)
                     /locus_tag="VF991_00205"
     CDS             complement(8407..9081)
                     /locus_tag="VF991_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase-like oxidoreductase"
                     /protein_id="HEX9554879.1"
                     /translation="MSDDEVILSGEIRNKLVDSKQKWAENGRLLTGKTAAPSQRLPPG
                     QRRVETWPVLDLGIQPEIPSHAWRLFVDGEVEQPTTWKWGEFTDLPKTTLTTDIHCVT
                     AWSRYDNTWQGVGARDLLAIVKPKAEARHVIFHSYDTYTANVPLADFSADDVLLAWSW
                     NGEPISREHGGPLRVVIPRLYFWKSAKWIKRIEFSVYDKPGFWEVRGYHNYGDPWLEQ
                     RYDEEA"
BASE COUNT         1418 a         2965 c         3106 g         1602 t
ORIGIN      
        1 ggcatcgacc accagcgcca cgaggtcggc gtcgtcggcg ccctgccagg cggcggcgac
       61 catggcccgc tcgaggcggc gcttggcgat gcggaagatg cccggcgtgt cgaccagcac
      121 gagctgtgcg cgcgagccgc ccggtccgtc gtcggccaag tcgaccatgg cgatgccgat
      181 cacccgcatg cgcgtggtct gcaccttggg cgagacgatg ctcaccttgg agccgaccag
      241 ggcgttgacc agggtcgact tgccggcatt gggcgcgccg acgatggcgg cgaagccggc
      301 ccgcgtgcgc ggcccggtca tggcttggcg agctgttcta gcatcaggct cgccgccgcg
      361 ctttcggcgt cgcgcttggt ctggcccctg ccctgcgccg ccggcaggct gccgacgcgg
      421 acctcgacca ggaagaccgg ctcgtgctcg gagccttcgc ggccgacctg gcggtaggcc
      481 ggcagggcga ggccgcgcgc ctgcgcccat tcctggagct gcgtcttggg cggccgcggt
      541 gccggattgt ggctgcccag ccgctcctcc cacagccgct cgatcgcgtg cgccgccgct
      601 tcgaagccgg catcgagaaa gatcgcgccc agcaaagctt cgagcatgtc ggaaaggatg
      661 gccttggtcg ccggcggcgc cccgcgatag ccgatcaggt gatcgcgcag gccgatcgcc
      721 tgggcgatct cgcccagggt gcgggcgctc accagggcgg catggcgccg cgcgagctgg
      781 ccttcgcgtt cctgcggaaa gcgccgcagc agcaggtcgg ccatggcgag cgacagcacg
      841 cggtcgccta aaaactccag ccgttcgttg ccgtgcggga aggccgcctt gaggtcgggg
      901 cggcggtcga gcgtgccgcg gtgcgtgagc gcctcgaccg ccagctcgac acgcgtgaag
      961 gcgtgtccaa ccttgccggc cagcgccgcc agatcgacgt cgctcgcctt cagtggatcg
     1021 ccgtgaagaa gcgactgaag cggatggcct gcggccattt ccacggctcc agccaaccgg
     1081 cggccgaggg atcgtgcgaa aagaagatga attcggcgcg gccgaccagg ttttcggcgg
     1141 gcacgtacca gccgagctgg tcgcgatcgc gcggcgtgcc ggagaagtcg cgcaacatca
     1201 ggcgggttcg gctgtcgagc gagtcgtcgc ggttgtcgcc catgacgaag tagttgccgg
     1261 ccggtaccag gaactccggc gtgttgtcgg ccatgccgtt gtcggtgtac tcgagcacgg
     1321 tgaagcgccg gccgttgggc agcgtctcgc tgtagagcgt gcctttctga tagtggccgt
     1381 tggtgccctt cacatagtcg ccgatgcgca ggcgctggac cggcgtgccg ttgatgtgca
     1441 gcacgccgtt ggtcacctgg atgcggtcgc ccggcaggcc gacgatgcgc ttgatgtagt
     1501 cggtgcggtt gaggccctgg ccctggtcgc cgggatactt gaacaccgcc acgtcgccgc
     1561 gctcgggcgg atggctgaaa atgcggccgg agaagaggcc cagcgaaaac gggaacgagt
     1621 gcttgctgta gccgtaggag tatttcgaga cgaacaggta gtcgccgacc agcagggtcg
     1681 ggatcatcga gccgctcggg atgttgaacg gctcgatggc gaaggtgcgc acgaccagcg
     1741 cgatcaggac ggcataaacc accgtgcgga tggtttctgc ccagccgccg gccttctcct
     1801 gtccacgctt gcgacgttca accacgtctg tcatcgccgt accagtttaa acgagccgcg
     1861 cctatagcag ggcgcaaagc cactgtctcc cgctgcgggc gcggcatggg agcactgcaa
     1921 aatgcagggg acgccacggc tcatggacgg gggaccgcgg aaatgatcac aatcgcctgc
     1981 gccatgggat attcgtcggt caaggtcagg tcgatttgcg gcgacattcc ggccggcgtg
     2041 atctcttgca gccgcgccaa tgcgccgccg gtcaatgcca gggtgggctt gccgccgcgc
     2101 tgattgacca cgcccatgtc acgccagaac acgccgcggc gcaggccggt gccaagcgcc
     2161 ttggcgcaag cctccttggc ggcgaagcgc ttggcatagc tcgccgcccg cgtcgcccgg
     2221 ccgtccgagc gcttctgttc agtctcggtg tagacgcgtt gcacaaagcg gttgccgaag
     2281 cgttccagcg acttctcgat ccgtctgatg tcgataaggt cgttgccgat gccaatgatc
     2341 accgggcggc tcctccgccg cgggcggcat ccatgacgcg gcgcatctcg cggatcgcct
     2401 gctccagccc gacgaagatc gcctcgccga ccaggaagtg gccgatattg agctcgcgca
     2461 cctcgggaat cgccgccacc gggccgacat cggcgtagct cagcccgtgg ccggcatggc
     2521 attcgaggcc gagcctggcg cagagcgccg ccgccttctg caggcgcaca agctcggcgc
     2581 gctgcggctc gccctcgagc tcgcaatacc ggccggtatg cagttcgacg accggcgcgc
     2641 ccagcgcgac cgcggcctcg agctggcgcg gatcggcctc gatgaacagc gagacgcgga
     2701 tcccggcgtc gcgcaggcgg gcgatcatcg gcttcagatg gttgtgctgg cccgccgcat
     2761 cgaggccgcc ttcggtcgtc cgttcctcgc gcttctccgg cacgatgcag gcggcgtgcg
     2821 ggcggtggcg caacgcgatg tcgaccatct ccttagtcgc cgccatctcg aagttgagcg
     2881 gcagcttgag ctcgcgcatc aggccttcga tgtcgtcgtc gacgatgtgc cggcggtcct
     2941 cgcgcaggtg agcggtgatg ccgtcggcgc cggcggcctc ggcgatgcgc gcggcccgga
     3001 gcggatcggg cagccggccg ccgcgcgcgt tgcgcaccgt ggcgacgtga tcgatgttca
     3061 ctccgaggcg cagggggtgg ggcgcaggca ttctactcac tctcttcgaa gctctatcaa
     3121 atcaacagac tcaggcccct ctccccctat cggggaagag gaacttgagt cgtgtccact
     3181 ccatcgtgat ggtgtcgtca attgcgggcg cgctcgacgg cgttgatggc gggcgtggcg
     3241 cgcagcgccg ctgtgatgtc ggccaggtgc ttgacgtcgg ccacctcgac gtcgatcacc
     3301 atgtcgaaga aatccatcga gcggttgacg atgcgcaggt tggagatgtt gccctcgtgg
     3361 cgggcgatca ccgtcgacag gctcgacagg ctgcccggct ggttggcgac ggtgatcttg
     3421 agccggccgg tgtagacgcc aggcgcgctt tcgcccactg aatcccagcc gacatcgatc
     3481 caccgttcgg gcgcctcgga gaagctctcc agcgtggcgc agtcgatggt gtggatggtg
     3541 acgcccttgc cggtcgtgat gatgccgacg atgcggtcgc cgggcagcgg atggcagcag
     3601 cgggcgaaat gcacggccat gccggggatc aggccgcgga tggcgatctg accggcttcc
     3661 ttcttgccgc ggctgcggtc ggcggccttg gccttgttgc gcgcccgcga aatcggcacg
     3721 acatcggcgc cgcctggctt gcgaggctgc ttgaggccgg gatagaccgc cgtcagaacc
     3781 tcgcgcgcgc cgagcaggcc ggcgccgacg gcggcgacca ggtcgtcggt ggtcgcctgc
     3841 ttgaaattgg cgcgcacgcc gtcgaggccc ttctcggtga cctcgtagcc ctcttcgtgg
     3901 aaggacttgt cgagcagcga gcggccgagc tggatgtact gctcgcgctg gcgcgtgcgg
     3961 atgtagcggc ggatcgccgc cttggccttg ccggtaacga cgaagcgctc ccaggtcggc
     4021 gacggcgtct gcgccttcga ggtgatgatc tcgacctggt cgccgttgga aagctgggtg
     4081 cgcagcggca gcatgcggcc gttgatcttg gcgccgacgc aggtgtcgcc gacctggctg
     4141 tgcaccgcat aggcgaaatc gatcggcgtg gcgccgcgcg gcagggcgat cagcttgccc
     4201 ttgggcgtga agcagaacac ctggtcctgg aacatctcga gcttggtgtg ctcgaggaac
     4261 tcctcggcgt tgggcgcctt gtcgaggatt tctatgaggc tgcgaagcca ggcgtattgt
     4321 ggggcatccg tggagggtcc gccctgctta taaatccagt gcgcggcgac gccgcggtcg
     4381 gcctggtcct gcatctcctc ggtgcggatc tggatctcga tgcgctggcc gagcgggccg
     4441 atcaccccgg tgtgcagcga gcgatagccg ttgggcttgg gcaccgagat gtaatccttg
     4501 aaacgctgcg gcaacacctg gtagcggccg tgcagcaggc cgagcgcctg gtagcactgg
     4561 gcgatgtcgg cgacgatgat gcggaaggcc atgatgtcgg cgagctgctc gaacgacacg
     4621 ttcttggtct gcatcttgcg ccagatcgaa tagggcatct tctcgcgccc cgagacctgg
     4681 gcggcaagcc cgccatcctt cagcgtcttg accagctcgg cctcgatctg cggcaccagc
     4741 cgctcgccgc gctcgcgcag gtagccctgg cgggccagca ccgaggcgcg gccgtcggga
     4801 ttgagctcgg cgaaagccag ctcctcgagc tcgcgcttga cgttctccat gccgatgcgc
     4861 gaagcgagcg gggcgtagag atccatggtc tcgcgggcga tgcgcttgcg ccgcaccgga
     4921 tccttgatgt ggccgagggt gcgcatgttg tgcagacggt cggcgagctt caccagcagc
     4981 acgcggatgt ccgacgacat cgccagcacc agcttgcgca ggttctcggc ctccttggtg
     5041 ctctccgact ggacttcgag gcggctgagc ttggtcacgc cgtcgaccag ccgggcgatg
     5101 ttctcgccga acaggccggc gatctcgtcg cgcgtggcgt cggtgtcctc gagcgtgtcg
     5161 tgcagcaggc cggtgacgat cgacgaggtg tcgaggcgca tctcggccag gatgccggcg
     5221 acctcgacgg ggtgggagaa ataggggtcg cccgaggcgc gcagctgggt gccatgcttc
     5281 ttcaggccgt agacataggc gcggttcagc atctcctcgt ccgcatccgg atcgtaggac
     5341 tgcacgcgct cgacgagttc aaactggcga atcatggcaa tcgcccatta tatggggacg
     5401 attgccctca ctccacggtg tttatgcgct gggagcgcgg cactccagtg ccgctctttc
     5461 tttcttttcg ttgcaggaca aagaggcgcc actggagtgg cgcgctccca gtcactactc
     5521 ggtgatgtcg tcttcctcgg ccatcggcag cgccttgggc tgggccgctt cggcgccgcc
     5581 ctgggccagc gccgcggcca gctcctgctc gagctcggcc atctcgttga cctcttcggg
     5641 cttgtcgatg tcggcgtgct tctgcatgcc ggagatcagc gagtccttga gcacggtctg
     5701 gtcgagcttg gtctcggcga tctcgcgcag cgccacgacc gggttcttgt cgcggtcgcg
     5761 atcgacggtg atctgggcgc cggccgagac gtcgcgcgcg cgctgggcgg cgaacatgac
     5821 aagctcgaaa cggttgggca cctgcaggat gcagtcttcg acggtgacgc gcgccatggc
     5881 gacctctgat ttaccgggag ccggcggtta tacgcgccgc ccatcaaaag acaaggggcc
     5941 aaaaatgcaa gcgccggctc tagaaacgct cgatggtctg tccggccggc agcgccgcca
     6001 acagggcctg gatcggcagg ccggtcgccg gatggcgcca gccgggggcc aggtccgcca
     6061 gggggcgcag cacgaaggcg cggtcctgca ggcgggggtg cggcaaggtg gcccgcccgg
     6121 gcccgcccgg ggctatttcc ccccgaaaat ccagtaaatc caggtcgatg gcccgggggg
     6181 cgttgggaac ggtacggacc ctgccaaagt cctgctccac ctcatgaagg acggccagaa
     6241 gccggtcggc cggcaaagcc gtctcgacct cggcgacggc gttcacgtac cagggctggt
     6301 ccgaggccgg gatgggagcg gtgcgatacc acggcgagac ccgcaggacg gacacaccgc
     6361 gccggcccag ctcgtccagg gcagcctcga gcgtgcggcg cggggagcca tgggtcggat
     6421 gaggcagatt cgcgccggtg ccgatgaaaa ttgtgcctcg gtcggtattt tccaccagca
     6481 agaacctcca accccttgtg atctatgaaa taatatccta gacttaatcc gtggtcggag
     6541 gggtgtgggt tacgtatctc ctaccgctag ataaaatttt tcgctccctc tgcgcatatt
     6601 ctccaaaagg attacggcca tgaaaggcaa tttttacgaa aacgagcgtg tggctctctt
     6661 catcgacggc gccaacctct actccgccgc ccgcgccttg ggcttcgaca tcgactaccg
     6721 gcgcttgctg aaagtcttcc gcgagaaggg ccggctggtc cgcgcctact attacacggc
     6781 gctggtcgag gatcaggaat actcgccgat ccggccgctg atcgattggc tggactacaa
     6841 cggctacacc atggtgacca agccgaccaa ggaattcacc gacgccatgg gccgccgcaa
     6901 gatcaagggc aacatggaca tcgagctcgc catcgacgta ctggagatgg ccgagcatct
     6961 ggaccatgtg atcctgttct ccggcgacgg cgacttccgc cggctggtcg aggcggtgca
     7021 gcgcaagggc ctgcgcgtct cggtggtcag caccatcaag tctgcgccgc ccatggtggc
     7081 cgacgagctg cgccgccagg cggacgactt catcgagctg tccgagctgg cgccgctgat
     7141 cgcgcgcaat ccgtcggagc gcgcgccgcg accggcggtg gcggcgcaat tcggctctcg
     7201 cgatcacgac ggcgagctcg acgacgcgcc ctccgaatcc ttgatccggt cggcctaacg
     7261 acgacggtcc tgtggccgcg tcgcgtttcg aagaaccgcc gtccgattgt ccccgctgcc
     7321 ccaggctcgt cgccttccgg cacgagctca gggcgcaata tcccgattgg cagaacgcgc
     7381 cggtccgctc gttcggcgac ctcgacgcgc gggtgctgat cgttggcctc gcgccgggca
     7441 tgcgcggcgc caaccgcacc ggccggccgt tcaccggcga ctatgccggc gacctgctgt
     7501 actcgaccct gctgacgttc ggtttcgccc agggcgtcta tcgcgccgat ccgaacgacg
     7561 ggctgcacct ggtcaactgt cgcatcgcca acgcggtgcg ctgcctgccg ccggagaaca
     7621 agcccctgcc cgtcgaattc acgaactgcc ggccgttcct gcaggccgag ctggcagtga
     7681 tgcccaacct tcgagtcatc gtggccttgg gcaagggcgc tcacgaccag gtcctgcggg
     7741 cgctcaccat caggccggcc ggtgcctatc cgttcatcca cggcaagctg catgctctgc
     7801 cgaccggcct cagcctggcc gacagctacc actgctcgcg ctacaacacg aacaccggcc
     7861 ggcttacgac ggagatgttc catgcggtgt ttgcgggcgt gcgcaaagcg ctcggctcat
     7921 gatcttggct agagagcggc ttcgatcgcc tcggtaatct cgctgctgcc gggccgcacg
     7981 cggctcggcc aagcgcctaa aaggctgccg tccttgccga tcaggtactt gtggaagttc
     8041 catttgggtg cggcgccctc gcccgcctcc tgggcgatcc actggtaaag cgcgtgggcg
     8101 tcggggccga tcaccttctg cttggaggtg agcgggaaag tgacgccgta catgctctcg
     8161 cagaacttgg cgatctccgg ctcggtgcgg ggctcctgcg cgccgaaatc gttggacggc
     8221 acgcccacca ccaccaggcc cttcggcccg tagctctcgt gcagcttctg caggtcggtg
     8281 tattgcggcg tgaacccgca ataggaggcg acgttcacca ccagcaccgg cttgccggcg
     8341 aaagccttca ggtcgagcgg cttgttgtcg atggtggtga aggtgaaatc gtgtgccgac
     8401 gccatgtcac gcctcctcgt cgtagcgctg ctcgagccag ggatcgccgt aattgtgata
     8461 gccgcgcact tcccagaaac ccggcttgtc gtataccgag aattcgatgc gcttgatcca
     8521 tttcgcgctt ttccagaagt agagcctggg gatcaccacc cgaagcggcc cgccatgctc
     8581 gcggctgatc ggctcgccgt tccagctcca ggccagcagc acgtcgtcgg ccgagaaatc
     8641 ggccagcggc acgttggccg tgtaggtatc ataggaatgg aagatcacgt gccgggcttc
     8701 cgccttgggc ttgacgatgg cgagcaggtc gcgcgcgccc acgccttgcc acgtgttgtc
     8761 gtaacgcgac caggcggtga cgcaatggat gtcggtcgtc agtgtggtct tgggcaggtc
     8821 ggtgaactcg ccccacttcc aggtcgtggg ctgctcgacc tcgccatcga cgaacaggcg
     8881 ccaggcatgg ctcggaattt ccggctggat gccgagatcg agcaccggcc aggtctcgac
     8941 ccggcgctgt ccgggcggca ggcgctgcga cggggcggcg gtcttgccgg tcagcagccg
     9001 gccgttctcg gcccatttct gcttgctgtc gaccagcttg ttcctgatct cgccggacag
     9061 gatgacctcg tcgtcggaca tggaactcct t
//
LOCUS       DASWGA010000009         2983 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1013499, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000009 DASWGA010000000
VERSION     DASWGA010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013499"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..381
                     /locus_tag="VF991_00210"
     CDS             37..381
                     /locus_tag="VF991_00210"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9554880.1"
                     /translation="MTVKFEDMMRELFTPKERAAIRRTAAGIAKRHLALRELRQARNR
                     TQVSIARRLGVKQVNISRLESREDPRLSTLTKYIDAMGGRLHLIVEFPEQEPVLLRGV
                     GRSRSKTRSKAA"
     gene            complement(384..2051)
                     /locus_tag="VF991_00215"
     CDS             complement(384..2051)
                     /locus_tag="VF991_00215"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX9554881.1"
                     /translation="MTQLGPIDYAVISQALIATAREMGVKLIRSAYSTILREARDGSA
                     GLMDRHGNTVAQAELIPMQLGPIGETLRACLRRHPVETLKEGDFLINNDPFEGGQHIP
                     DVFIFTPIFVDGRVVGFGASVAHHLDLGGGAPGLNIHASDVYQEGIRFPPSKYSFEHD
                     WNGGSFERLVTANVRVPDLTIGDFNAQFAANAIGVLRVKQLCQRYGADVVETAMAEMQ
                     DYSERRVRAAIAQAPKGTFYGEDAVDDDGLTDDPLVVKAKVTIAHDSVEIDFEGTCAQ
                     VKRNLNCPYSSTLSAALSCVKSVLTSPDIPYNEGMARPIRIKVPYGSLLNPRPPAPVR
                     ARMIPAYRVFNAVMKAMAQALPDKVIATGFDCTTAFCLSQLGERGYSVYLEIFGGGYG
                     ASKGADGCDAVDSPLSNCSNAPVESLDIDYDFFRIVGYELAPDSFGLGARRGGAGFIR
                     RCEILKDDVQLAVYSDRFRLAPQGLQGGEPGQRGYCRIHRANGTVEDLRSKAAVDLAK
                     GDIVEMFVGGGGGFGKLSERPDALIERDLADGLLTRDRRAARKLAAE"
     gene            complement(2066..>2983)
                     /locus_tag="VF991_00220"
     CDS             complement(2066..>2983)
                     /locus_tag="VF991_00220"
                     /inference="COORDINATES: protein motif:HMM:NF039581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9554882.1"
                     /translation="VIGTIRPGAFLGGHMSLDGEAARRALEPLASRFGLSIEQAAASA
                     LQLADANIVRAIQLVSTERGRDPRDYALVPFGGAGPLHAARIAEELGIATIVVPPNAG
                     VISAYGLVASDYTKFDAVTRKMKLDDAAAKEAGRIFDEMRARLAAQFADMKLPGDLLY
                     THTLDMRFVGQAFEVGVEIPAGRLGSLDAAYLADLFADAHHRTFMHGATLERPVEIVT
                     LRVGATLPVGAAPQLDREISAGRTPEQGRLFHGEAWIDCARYASEALTEGQKIAGPAV
                     IEGYTATIWVPTDWTATLDKADNLILRRS"
BASE COUNT          505 a          957 c         1034 g          487 t
ORIGIN      
        1 tctcgccgcc ctgcgcggca tcaagaggag ataggcatga ccgtgaagtt cgaagacatg
       61 atgcgggaac ttttcacgcc aaaggagcgc gccgccatac ggcgtactgc cgccgggatt
      121 gcgaagcgtc acctggcact ccgagaattg cgccaggcgc gtaaccgcac gcaggtgtcg
      181 atcgcccgcc gactgggtgt aaagcaggtc aatatctcac gccttgagag tcgagaagat
      241 ccccgcctgt cgacgcttac caaatacatc gatgcgatgg gcggccggct ccatttgatc
      301 gtcgagtttc ctgagcagga accagttctg ctgcgcggcg tgggccgcag ccgctccaag
      361 accaggagca aggcggctta gcgctactcc gctgccagct tgcgcgccgc gcgtcgatcg
      421 cgcgtgagca ggccatcggc gaggtcacgc tcgatcagcg cgtccggccg ttcggagagc
      481 ttgccgaagc cgccgccgcc gcccacgaac atttccacga tgtcgccctt ggcgagatcg
      541 accgcggcct tgctgcgcag gtcttcgacc gtgccgttgg cgcgatggat gcggcaatag
      601 ccgcgctggc ccggttcgcc gccctgcagg ccctgaggcg ccagccggaa gcggtcggaa
      661 tagaccgcaa gctgcacgtc gtccttcagg atctcgcagc ggcggatgaa tcccgcgccg
      721 ccgcgccgcg cccccaggcc gaacgaatcg ggcgcgagct cgtagccgac gatgcggaag
      781 aaatcgtagt cgatgtcgag cgattcgacc ggcgcgttgg agcagttgct gagcggggaa
      841 tcgacggcgt cgcagccatc ggcgcccttc gacgcgccat agccgccgcc gaagatttcc
      901 aggtagacgc tatagcccct ctcgccgagc tgggagaggc agaacgcggt ggtgcagtcg
      961 aagccggtgg cgatcacctt gtcgggcagc gcttgcgcca tcgccttcat caccgcgttg
     1021 aacacgcggt aggccgggat catgcgcgcc cgcaccggcg ccggcggccg cgggttcagc
     1081 agcgagccgt agggcacctt gatcctgatc ggccgggcca tgccctcgtt gtagggaatg
     1141 tcggggctgg tcagcaccga cttcacgcag gagagcgcgg cggagagcgt gctggaatag
     1201 gggcagttga ggttgcgctt gacctgcgcg caggtgccct cgaagtcgat ctcgacggag
     1261 tcgtgggcga tggtgacctt ggccttcacc accagcggat cgtcggtgag cccgtcgtcg
     1321 tcgaccgcat cctcgccata gaaggtgccc ttgggcgcct gggcgatggc ggcgcgcacg
     1381 cggcgctcgg agtagtcctg catctcggcc atcgccgtct cgaccacgtc cgcgccatag
     1441 cgctggcaaa gctgctttac gcgcaacacg ccgatggcgt tggcggcaaa ctgggcgttg
     1501 aagtcgccga tggtgaggtc gggcacgcgc acattggcgg tcaccaggcg ctcgaaggag
     1561 ccgccgttcc agtcgtgctc gaaactgtac ttggagggcg ggaaacgaat tccttcctga
     1621 tagacgtccg aagcatggat gttgaggccg ggcgcgccgc cgccgagatc gagatggtgc
     1681 gccaccgagg cgccgaagcc gacgacgcgg ccatcgacga agatcggcgt gaagatgaac
     1741 acgtcgggga tgtgctggcc gccctcgaac gggtcgttgt tgatcaaaaa gtcgccttcc
     1801 ttcagcgtct cgactggatg gcgccgcagg caggcgcgca gggtctcgcc gatcgggccc
     1861 agctgcatgg gaatgagctc ggcctgggcc accgtgttgc cgtgtcggtc catcaggccc
     1921 gccgagccgt cgcgtgcctc gcgcaggatg gtcgaatagg ccgaacggat cagctttacg
     1981 cccatctcgc gcgccgtcgc gatcagcgct tggctgatca cggcatagtc gatgggaccc
     2041 agttgcgtca tggcgatctc cgccctcaag acctacgcaa gatcagattg tccgccttgt
     2101 cgagcgtggc cgtccagtcg gttggcaccc agatggtggc ggtatagcct tcgatgacgg
     2161 cgggcccggc gattttctgg ccttcggtga gcgcctcgga cgcgtagcgg gcacagtcga
     2221 tccacgcctc gccgtgaaag agcctgccct gctcaggcgt gcgaccggcc gaaatctcgc
     2281 gatcgagctg cggcgccgcg ccgaccggca gggtggcgcc gacgcgcaag gtcacgatct
     2341 ccaccggcct ctcgagcgtg gcgccgtgca tgaaggtgcg gtgatgggcg tcggcgaaca
     2401 ggtcggcgag ataggctgcg tcgagcgagc cgagccggcc ggcgggaatc tccacgccga
     2461 cttcgaaggc ctggccgacg aagcgcatgt cgagcgtgtg ggtatacaaa agatcgcccg
     2521 gcagcttcat gtcggcgaat tgcgcggcca gccgggcgcg catctcgtcg aagatgcggc
     2581 ccgcctcctt ggccgcggca tcgtcgagct tcatcttgcg cgtgacggcg tcgaacttgg
     2641 tgtagtccga ggcgaccagc ccataggccg agatcacgcc ggcgttgggc ggcacgacga
     2701 tggtggcgat gccgagttcc tcggcgatgc gcgcggcatg caatggtccc gcgccgccga
     2761 atggcaccag cgcgtaatcg cgcggatcgc ggccgcgctc ggtcgagacg agctggatgg
     2821 cacgcacgat attggcgtcg gcgagctgca gcgccgaagc ggcggcttgc tcgatgctca
     2881 agccgaagcg cgacgccaat ggttccaagg cgcgccgcgc cgcctcgccg tccaagctca
     2941 tatggccgcc taaaaaggcg ccggggcgga tggtgccgat gac
//
LOCUS       DASWGA010000010         2640 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2406272, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000010 DASWGA010000000
VERSION     DASWGA010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2406272"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..1031)
                     /locus_tag="VF991_00225"
     CDS             complement(3..1031)
                     /locus_tag="VF991_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9554883.1"
                     /translation="MGQITLQGVHKSFGQLDIIKDANLDIADGSFVVFVGPSGCGKTT
                     LLRLIAGLEDVTGGQILIDGQNVVNVPPAKRGLSMVFQSYALYPHMSVRGNIAFGLKM
                     AGLPRPEINRKVEAAAATLNLTPYLDRKPRELSGGQRQRVAIGRAIVREPKAFLFDEP
                     LSNLDAALRVQMRMEVTRLQKQLATTAVYVTHDQVEAMTMADRIVVLNAGRVEQYGSP
                     LDLYERPANLFVAGFIGSPKMNFVSGPPAGQRGAATIGIRPEHLRIAGEGEGAGGGGG
                     DGWPGTVSVAEHLGSDTFLYVDAGALGLLTVRGIGEIHLRGGDRVWLSPDPARLHCFD
                     KDGMAIRP"
     gene            complement(1044..1874)
                     /locus_tag="VF991_00230"
     CDS             complement(1044..1874)
                     /locus_tag="VF991_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014329271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9554884.1"
                     /translation="MARRVTVRRMVVSTVAAWFFGGLIFFPILWMVLTSFKTELEAFT
                     IPPSFLFFEWTTENYATVQDRSDYFHHAMNSVIIAGGSTVIAALIAVPAAWSMAFAPT
                     KRTKDILLWMLSTKMMPAVGVLVPIYLLFKNLGLLDSLSGLVAILCLGNLPIVVWMLF
                     TYFKEIPRDILEAARMDGATIRRELVYVLLPMAIPGIASTLLLNLILAWNEAFWTLNL
                     STSKAAPLTVFIASYSSPEGLFWAKLSAASTMAIAPILVLGWFCQRQLVRGLTFGAVK
                     "
     gene            complement(1878..>2640)
                     /locus_tag="VF991_00235"
     CDS             complement(1878..>2640)
                     /locus_tag="VF991_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9554885.1"
                     /translation="LHYSLLDPGSESFVGLDNFRYFLTDPAFLASLQNTLVLVGSVLA
                     LTIVLGVPLALLLDQPVIGRSIVRLMVIAPFFVMPTVSALVWKNLLLHPVSGLLAWLQ
                     TLVGMTPIDWFNDAPMLAVILIVAWQWLPFATLILLTALQSQDEEQKEAAEMDGAGAL
                     STFIHLTLPHLARPITVVILIETIFLLTVFAEIFVTTGGGPGLQTTNIAFLIYSQALI
                     QYDVGSASAGGLVAVVIANIIAFFLVRVVGRNLEA"
BASE COUNT          489 a          841 c          916 g          394 t
ORIGIN      
        1 gctcatgggc ggatcgccat tccgtccttg tcgaagcaat gcagccgggc gggatcgggc
       61 gacagccaca cgcgatcgcc acccctgaga tggatctcgc cgatgccgcg caccgtgagc
      121 agtcccagcg cgccggcatc gacgtagagg aaggtgtcgc tgccgagatg ctcggcgacc
      181 gacaccgtgc ccggccagcc gtcgccccca cccccgcccg ctccctctcc ctcgcccgcg
      241 atgcgcagat gctcgggccg gatgccgatg gtggcggcgc cgcgctggcc ggccggcggg
      301 ccggagacga aattcatctt gggcgagccg atgaagcccg cgacgaacag attggccggc
      361 cgctcgtaca ggtccagggg cgagccgtac tgctcgaccc ggccggcgtt cagcaccacg
      421 atgcggtcgg ccatggtcat ggcctcgacc tgatcatgcg tcacgtagac ggcggtcgtc
      481 gccagctgct tctgcagccg ggtgacttcc atgcgcatct gcacgcgcag cgccgcgtcg
      541 aggttgctga gcggctcgtc gaacaggaag gccttgggtt cgcgcacgat ggcgcgcccg
      601 atcgcaaccc gctggcgctg cccgccggag agttcgcgcg gcttgcggtc gagatagggc
      661 gtgaggttga gcgtcgccgc cgcggcttcc accttgcggt tgatttccgg gcgcggcagg
      721 cccgccatct tgaggccgaa ggcgatgttg ccgcgcacgc tcatatgcgg atagagcgcg
      781 taggactgga agaccatcga caggccgcgc ttggccggcg gcacgttcac cacgttctgg
      841 ccgtcgatca ggatctggcc gccggtcacg tcctcgaggc cggcgatcag ccgcagcagc
      901 gtggtcttgc cgcagccgga gggaccgacg aagaccacga aagaaccgtc cgcgatgtcg
      961 agattggcat ccttgatgat gtcgagctgt ccgaaggact tgtggactcc ctggagcgtg
     1021 atctggccca tggtgtttcg cccctatttg acggcgccga aggtcaagcc gcgcacgagc
     1081 tggcgctggc agaaccagcc gaggacgagg atcggggcga tcgccatcgt cgacgccgcc
     1141 gacagcttcg cccagaacag gccctcggga ctcgagtagg aggcgatgaa caccgtgagc
     1201 ggcgccgcct tggaggtcga caggttcagc gtccagaatg cctcgttcca cgccaggatc
     1261 aggttcaaca gcagcgtcga ggcaatgccg ggaatggcca tgggcagcag cacataaacg
     1321 agctcgcgcc ggatggtcgc gccgtccata cgcgccgcct cgaggatgtc gcgcgggatt
     1381 tccttgaagt aggtgaagag catccagacg acgatcggca ggttgcccag gcagaggatg
     1441 gcgaccagcc cgctcagcga gtcgagcagc ccgagattct tgaacagcag gtagatcggc
     1501 accagcacgc cgacggcggg catcatcttg gtcgacagca tccagagcag gatgtccttg
     1561 gtccgcttgg tgggcgcgaa ggccatcgac cacgccgccg gcaccgcgat cagggcggcg
     1621 atcacggtcg agccgccggc gatgatcacg gagttcatgg cgtgatggaa atagtcgctg
     1681 cggtcctgca ccgtggcgta gttctccgtc gtccactcga agaacaggaa cgacggcggt
     1741 atggtgaagg cctcgagctc ggtcttgaag ctggtcagca ccatccacag gatgggaaag
     1801 aagatcaggc cgccgaagaa ccacgccgcg accgtcgaca ccaccatgcg cctgaccgtg
     1861 acccggcgtg ccatcgccta ggcctcgagg ttccgtccga cgacgcggac gaggaagaag
     1921 gcgatgatat tggcgatcac gaccgcgacc agcccgccgg ccgaggcgct gccgacgtcg
     1981 tactggatga gcgcctggga gtagatcagg aaagcgatgt tggtggtctg caggccggga
     2041 ccgccgccgg tggtcacgaa gatctcggcg aacaccgtca ggaggaagat cgtctcgatc
     2101 aggatgacca ccgtgatcgg ccgcgccagg tgcggcaggg tgaggtggat gaaggtgctg
     2161 agggcgccgg cgccgtccat ctcggccgcc tccttctgct cctcgtcctg cgactgcagg
     2221 gcggtgagca ggatcagcgt ggcgaagggc agccactgcc aggccacgat caggatgacg
     2281 gccagcatcg gcgcatcgtt gaaccagtcg atcggcgtca tgccgaccag cgtctggagc
     2341 cacgccagca ggcccgagac cggatgcagc agcaggttct tccagaccag cgcgctcacg
     2401 gtcggcatga cgaagaacgg cgcgatcacc atcagccgca cgatgctgcg cccgatcacc
     2461 ggctggtcga gcagcagcgc cagggggacg ccgagcacga tcgtcagcgc cagcaccgag
     2521 ccgaccagca ccagggtgtt ctgcagcgag gccaggaagg cggggtcggt gaggaagtag
     2581 cggaaattgt cgaggccgac gaaggattcg gatcccgggt cgagcaggct gtaatggagc
//
LOCUS       DASWGA010000011         2161 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2152690, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000011 DASWGA010000000
VERSION     DASWGA010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2152690"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VF991_00240"
     CDS             <1..192
                     /locus_tag="VF991_00240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554886.1"
                     /translation="LRPVAEVFYERDFGGVTTTSALVGAIWQVRDNIAFDVGLRGAQV
                     NDQPLREVRFGVTFSFPVR"
     gene            complement(216..1457)
                     /locus_tag="VF991_00245"
     CDS             complement(216..1457)
                     /locus_tag="VF991_00245"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEX9554887.1"
                     /translation="MRRIGRLAATLLTAAMIIGTGIFGALGDAADHAGSALLLAMIPG
                     ALVAWSTGVSGAQLGVNFPRGGGAFIWARAFHYDSLGFIAGCCYLGQGIVGTGVVALA
                     FAHYSAQLVPGLPIHAVAAAAVVSGVVLNSFGISFTSKVVIALMLTVVGLLAIFVSFS
                     IPHIEPANLVPRFEKGPLEFMAGAAIFFWAWDGFMRTAIMAGEMKDPRRTIPFSIAGG
                     IAIAAVVYYAVATATLGVLGADQIGTDDVPLFRAATGAIGAWGGWLILAAAWLAAVNE
                     LVSDLLSVSRVGHAMGEAGEMPGWFGELHPQYNVPRHAVAAIGAITVVLVLAFDLRQI
                     LPLASFYLLIWFAITHFAALHLSREQRLTSPFFSWFGLAGCFVLVFFIPPLLLVIGTA
                     TLALAAGVRFIARTFLRARSP"
     gene            1680..2018
                     /locus_tag="VF991_00250"
     CDS             1680..2018
                     /locus_tag="VF991_00250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554888.1"
                     /translation="METRHRFDQVQSNGRKAFLSVAMGLLPCPLIIIVVGSAIYRGAA
                     LAGIVLAVGINIGCFGLLGIAPRRGGLALLGGNIHRVLKGLAYLELLTSLPILTLGLF
                     TVAGVVGRGR"
BASE COUNT          411 a          682 c          711 g          357 t
ORIGIN      
        1 ttgcgacccg tggccgaggt cttctatgag cgggatttcg gcggcgtgac gacgacgtcg
       61 gcgctcgtcg gcgcgatctg gcaggtccgc gacaacatcg ccttcgacgt cggcctgcgc
      121 ggagcgcagg tcaacgacca gccgctgcgg gaggtccgct tcggtgtgac cttcagcttt
      181 cccgtccgct gaggcgtgca tcgtcgcacc ggcggtcagg gcgaacgtgc cctcaggaat
      241 gtccgggcaa tgaaacgaac gccggccgcg agggcgaggg tcgccgtacc gatgacgagc
      301 aacaacggcg gtatgaaaaa caccaggaca aaacacccgg caagcccgaa ccacgagaag
      361 aacggcgatg tcagacgctg ttcgcggctg aggtgaaggg ccgcgaagtg ggtgatggca
      421 aaccatatca acaggtagaa gctcgccagc ggcaggattt gccggagatc gaaggccagc
      481 acgaggacga ccgtgatggc gccaatggcg gcgaccgcat gacgcggcac gttgtactgc
      541 ggatgaagct cgccgaacca gccgggcatt tcaccggcct ctcccatggc gtgcccgacc
      601 cgcgagacgc tgagcagatc gctgaccaat tcattgaccg cggcaagcca ggcggccgcc
      661 aggatcagcc acccgcccca ggcgccgatc gcccccgtcg ccgccctgaa gagcggaaca
      721 tcgtcggtgc cgatctggtc ggcgccgagg acgcccagcg tcgccgtggc gacggcgtag
      781 tagacgacgg cggcaatggc tattccgccg gcaatggaga acggaatggt gcggcgcgga
      841 tccttcatct cgccggccat gatcgcggtg cgcatgaagc cgtcccacgc ccaaaagaag
      901 atggcggcgc cggccatgaa ttccagcgga cccttctcga agcgcggcac aaggttggcc
      961 ggctcgatgt gcggtatcga gaaggagacg aagatcgcca gcaagccgac caccgtcagc
     1021 atgagagcaa tgacgacctt gctcgtgaat gaaatgccga acgaattgag gacgacaccg
     1081 gagacgacgg cggccgctgc cacggcatgg atcggcaagc ctggaacgag ctgcgcggaa
     1141 tagtgcgcaa aggccagcgc aacgacgccc gtgccgacga tgccctggcc gaggtagcag
     1201 cagccggcga tgaagcccag ggaatcgtag tgaaaggcgc gcgcccatat gaacgcgccg
     1261 ccgccgcggg gaaaattcac gccgagctgg gcgccgctga cgccggtgct ccaagccacc
     1321 agggcgccgg ggatcatggc cagcagcagg gcgctgccgg cgtgatcggc cgcatcgccg
     1381 agggcgccga aaataccggt gccgatgatc atggcggcgg tgagcaaggt agccgccaac
     1441 cggccgatgc ggcgcatgga agaagcctgc ggcgtttctt cggcctgctg acggctcctg
     1501 actttcctcc gtcgcgtcac agatgcaccc tctgcgggtt acaatcggga gccgttccgt
     1561 tcacggctac gtcgtgacaa tcgaacggcg gcagcttctg gtttgttccg acgtcaaacg
     1621 gcgagctttt taggaatggc ttaaaactgc cctaaacttt ctgcgcctat gagcatccct
     1681 tggagacccg gcatcgcttc gatcaggtgc aatcgaatgg ccgcaaggcc ttcctctccg
     1741 tggccatggg tctgttgccg tgtccgctca tcatcatcgt ggtcggctcg gcgatctatc
     1801 gtggcgccgc cctcgccggg atcgtccttg ccgtcggcat caacatcggc tgcttcggcc
     1861 tgctggggat tgccccacga cgaggtggac tggctttgct cggcggcaac atccatcggg
     1921 tcctgaaggg tctcgcctat ctcgagttgc tgacctcgtt gccgatcctc accttggggt
     1981 tattcaccgt ggccggcgtc gtgggccgcg gccgatgatc atgacgcggc tggccgccgc
     2041 tctttgtccg ataacggccc gatcgtgacg gccatgccgg aagtctgtga tagagaacgc
     2101 cgatgaagac aaggcccgtc ctctatgccc tgttgtctgc cctgttgttc ggcatctcga
     2161 c
//
LOCUS       DASWGA010000012         1939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_254822, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000012 DASWGA010000000
VERSION     DASWGA010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254822"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /gene="mmsB"
                     /locus_tag="VF991_00255"
     CDS             complement(<1..705)
                     /gene="mmsB"
                     /locus_tag="VF991_00255"
                     /EC_number="1.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017958013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008442 - 3-hydroxyisobutyrate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006574 - valine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HEX9554889.1"
                     /translation="MAKIAFIGLGNMGGPMAANLVKAQHQVMAFDLSAAAVDAAVEKG
                     AKKVPSAAEAVKGAEVVVTMLPAGKHVREVYEKDVLPNVAKGTLLIDCSTIDVDSARH
                     VGALAQKAGLEMIDAPVSGGVGGATAGTLTFMVGGSDAAFAKAKPILEKMGKNIVHAG
                     ASGNGQAAKICNNMILGVSMIAVSEGFMLAKRLGLDAQKLFDVASTSSGQCWSLTSYC
                     PVPGPVPTSPANRDYQP"
     gene            complement(728..1795)
                     /locus_tag="VF991_00260"
     CDS             complement(728..1795)
                     /locus_tag="VF991_00260"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX9554890.1"
                     /translation="MSEAEILFDVKNGLGLVTLNRPKALNALTHGMILELEKVLPGWE
                     KDAAVKAVMLRGAGDRAFCAGGDVIGLYREMRDNLSGTLRRDFFRDEYIVNRRIYRFA
                     KPWISLIDGIDMGGGVGLSAHGSHSVASEKFLFAMPETTIGLFPDVGGGYFLTRLPGA
                     LGTFLALTSHRLKAADALWAGIVEAYMPSARMNDLLAGLGAADLSGPDAHRKVDAVIE
                     RFAEDAGRPTLPALMLDIDRCFSAESVAEIEAKLRKHPGEWAKKQLAALMKLSPLSMA
                     ITLEQLKRCANRSFEDTMTIEYRMVQHAMRPDHDFFEGVRALLIDKDQKPKWNPPTIE
                     GVTRDMVEAHFKPVANDLVFD"
BASE COUNT          330 a          656 c          613 g          340 t
ORIGIN      
        1 cggctggtaa tcgcgattgg ccggcgacgt cggcaccggc cccggaaccg gacaatagct
       61 cgtcagcgac cagcactggc ccgacgaggt cgaggcgacg tcgaacagtt tttgcgcatc
      121 gaggcccagt cgcttggcca gcatgaagcc ctcgctgacg gcgatcatcg acacgccgag
      181 gatcatgttg ttgcagatct tggccgcctg gccgttgccg ctcgcgccgg catgaacgat
      241 gttcttgccc atcttctcga ggatcggctt ggccttggcg aaggccgcat cgctgccgcc
      301 gaccatgaag gtgagcgtgc ccgcggtggc gccgccgacg ccgccggaaa ccggcgcgtc
      361 gatcatctcc agcccggcct tttgcgccag cgccccgaca tggcgcgcgc tgtcgacgtc
      421 gatggtcgag cagtcgatca gcaaggtgcc cttggcgacg ttgggcagca cgtccttttc
      481 gtagacctcg cgcacatgct tgccggccgg cagcatggtg accacgacct cggcgccctt
      541 caccgcctca gcggccgacg ggaccttttt ggctcccttc tccaccgccg catcgacggc
      601 ggcggccgac aggtcgaagg ccatcacctg atgctgcgcc ttgacgagat tggcggccat
      661 cgggccgccc atgttgccga gaccgatgaa agcgatcttc gccatagtgt cctccctctt
      721 tcgccgatca gtcgaacacc aggtcgttcg cgaccggctt gaaatgcgcc tcgaccatgt
      781 cgcgcgtcac gccctcgatg gtcggcgggt tccatttggg cttctggtcc ttgtcgatca
      841 gcagcgcccg cacgccctcg aagaagtcat ggtcgggccg catggcgtgc tggaccatgc
      901 ggtactcgat ggtcatcgtg tcctcgaacg agcggttggc gcaacgcttt agctgctcca
      961 gcgtgatcgc catcgacaag ggcgacagct tcatcagggc ggcgagctgc ttcttggccc
     1021 attcgccggg atgtttcctg agcttggcct cgatctcggc caccgactcg gccgaaaagc
     1081 agcggtcgat gtcgagcatc agcgccggaa gcgtcggccg gccggcatcc tcggcaaaac
     1141 gctcgatcac cgcgtcgacc ttgcggtggg cgtctggacc ggacaggtcg gcggcaccaa
     1201 ggccagccag gagatcattc atgcgcgcgc tcggcatata ggcctcgacg atgccggccc
     1261 atagtgcgtc ggccgccttc aggcgatggc tggtcagcgc caggaacgta cccagggcgc
     1321 cgggcaggcg cgtcaggaaa tagccgccgc caacgtcggg gaagagaccg atggtggtct
     1381 ccggcatggc gaacaggaac ttctcgctcg ccaccgagtg cgaaccgtgc gcggacagac
     1441 caacgccgcc acccatgtcg atgccgtcga tcagcgagat ccacggcttg gcgaagcggt
     1501 agatacggcg gttgacgatg tactcgtcgc ggaaaaagtc gcggcgcagc gtgcccgaca
     1561 gattgtcgcg catctcgcga tagaggccta tgacgtcgcc gccggcgcag aaggcacggt
     1621 cgccggcgcc gcgcagcatc acggccttga ccgcggcgtc cttctcccag ccaggcagga
     1681 ccttttccag ctccaggatc atgccgtgcg tcagcgcgtt cagcgccttc ggccggttga
     1741 gcgtgaccag gcccagcccg ttttttacgt cgaataggat ctcagcttca gacattcaaa
     1801 ctcctatgac ccctccgccc ttcgggcacc tccccacgta agacgtgggg aggcgtcttt
     1861 cctccccgcg cgaagcgggg aggtggcgcg aagcgcctga ggggtcaccc catcaacaaa
     1921 cgccgcgaaa tgatcaccc
//
LOCUS       DASWGA010000013         3353 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1900115, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000013 DASWGA010000000
VERSION     DASWGA010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3353
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1900115"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..158)
                     /locus_tag="VF991_00265"
     CDS             complement(<1..158)
                     /locus_tag="VF991_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase"
                     /protein_id="HEX9554891.1"
                     /translation="MRFLSLQSHVAYGYVGNRAATFPLQRLGHEVWAVNTVEFSNHTG
                     YGAWRGRTA"
     gene            224..1105
                     /locus_tag="VF991_00270"
     CDS             224..1105
                     /locus_tag="VF991_00270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX9554892.1"
                     /translation="MSKTVRPRRSVLYMPGANTRALEKARSLPADALIFDLEDAVAPD
                     AKEAARTNVVAAAWSKAYGKREIAIRCNGLGTAWGQADVEAIATSGADAILVPKVESA
                     AEVTHVVSLLDAAGAPQTMAVWAMMETPKGILRAEEIAGSHPRLALFVMGTNDLVKDM
                     RARHTPARLPLLTALGLGMLAARAHGLTILDGVYNDIQDVEGFRAVCRQGLEMGFDGK
                     TLIHPSQVEPCNEIFAPSQAELEMAGKIVAAFRQAEAAGKGVVTVDGRMIENLHVEQA
                     ERALALAAAIKEMQAAA"
     gene            1102..2163
                     /locus_tag="VF991_00275"
     CDS             1102..2163
                     /locus_tag="VF991_00275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014889836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX9554893.1"
                     /translation="MSSKSKTSTGNFFEDFRVGQEIGHATPRTLTEADAALNVALYGP
                     RFAINSSDVFARSLGLPRAPLDDLMVFHVVIGKTVPDISLNAVANLGYAEFRWGVPVY
                     PGDTMSARSTVLGLRENSNRASGVVWVRSTGANQKGEMVLDYVRWVMVHKRDPAAAVG
                     APVVPKTAVAVAPADLIVPAGLTLSAYDDVAAGSSYRWEDYEPGERIDHVSGITLEDS
                     DHMFSTRLYQNTARVHFDAFAGKNTRFGRRLAYGGHIISLARALSFNGLANGFRVAAI
                     NAGSHVGPTFGGDTIYAWSEVLDKSPLPGREDLGGLRVRTIATKDCPCESWPGKQTDG
                     KYHPAVVLDLDYWLLMPRR"
     gene            2281..2679
                     /gene="sdhC"
                     /locus_tag="VF991_00280"
     CDS             2281..2679
                     /gene="sdhC"
                     /locus_tag="VF991_00280"
                     /inference="COORDINATES: protein motif:HMM:TIGR02970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEX9554894.1"
                     /translation="MSVANRPVHRPLSPHLQVYKWQLTSVLSILHRATGIALSVGALY
                     LALWVMFAAASPVTYAMFQSFNTSIVGRIFLGGWLFCGFYHLCNGIRHLFWDAGYGFE
                     LRDAYRSGWTVVAVSLIATAASWIVGLRLV"
     gene            2690..3076
                     /gene="sdhD"
                     /locus_tag="VF991_00285"
     CDS             2690..3076
                     /gene="sdhD"
                     /locus_tag="VF991_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEX9554895.1"
                     /translation="MNGDLRTPLARARGLGSAKAGVHHWWAQRLTAIALIPLVVWFAI
                     SLVMMSGAEYEVVRAWIGSPVVMVLLILTIAVGLHHAQLGIQVVIEDYVHSDGFKLAL
                     IVLVRFLAVLFGLAAIVAILSIGFGG"
     gene            3079..>3353
                     /locus_tag="VF991_00290"
     CDS             3079..>3353
                     /locus_tag="VF991_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013417790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX9554896.1"
                     /translation="MAEASNGKSNGAAPGTVTIGGNAYKVIDHEYDVVVVGAGGAGLR
                     ATFGMAAKGLKTACITKVFPTRSHTVSAQGGISAALGNMGPDDWRWH"
BASE COUNT          541 a         1118 c         1113 g          581 t
ORIGIN      
        1 gccgtgcggc cgcgccaggc gccgtaaccc gtgtggtttg agaattcgac cgtgtttacc
       61 gcccagacct cgtggcccaa tcgttgcagg ggaaaggttg ccgcccgatt gccgacatag
      121 ccgtaggcaa catggctctg aagcgaaaga aagcgcatgg aagcggccac cttgccacaa
      181 ggacgtccgt cattatagtc cgccgcgttt tcgggagagc ctcatgtcga agaccgttcg
      241 tccgcgccgc agcgtcctct acatgccggg cgccaatacg cgtgcgctcg aaaaggcgcg
      301 cagcttgccg gccgatgcgc tcatcttcga cctcgaggac gccgtcgcgc ccgacgccaa
      361 ggaggccgcc cgcaccaacg tcgtggccgc cgcctggagc aaggcctatg gcaagcgcga
      421 gatcgccatc cgctgcaacg gacttgggac ggcctggggc caggccgacg tcgaggcgat
      481 cgccacctcc ggcgccgacg cgatcctggt gccgaaagtc gagagcgccg ccgaggtcac
      541 tcatgtcgtg tcgctgctcg atgcggccgg cgcgcctcag accatggcgg tgtgggcgat
      601 gatggagacg cccaagggca tcctgcgcgc cgaggagatc gccggctcgc acccgcggct
      661 ggcgctgttc gtcatgggca ccaacgacct ggtgaaggac atgcgcgcgc gccacacgcc
      721 cgcgcgcctg ccgctgctca ccgcgctcgg gctcggcatg ctggcggcgc gcgcccacgg
      781 cctcaccatc ctcgacggcg tctacaacga catccaggac gtggaaggat ttcgcgccgt
      841 ctgccggcag ggcctcgaga tgggcttcga cggcaagacg ctgatccatc ccagccaggt
      901 cgaaccgtgc aacgagatct tcgcaccctc gcaggccgag ctcgagatgg cgggcaagat
      961 cgtcgccgcc ttccggcagg ctgaggcggc aggcaagggc gtggtcaccg tcgatggccg
     1021 catgatcgag aacctgcacg tcgagcaggc cgaacgcgcg ctggcgctgg ccgcggcgat
     1081 caaggagatg caggccgccg catgagcagc aagagcaaga ccagcaccgg caacttcttc
     1141 gaggatttcc gcgtcggcca ggaaatcggc cacgccacgc cacgcacgct gaccgaggcc
     1201 gacgccgccc tgaacgtcgc gctctacggc ccgcgctttg ccatcaattc atcggacgtc
     1261 ttcgcccgct cgctcggcct gccacgcgcg ccgctcgacg acctgatggt cttccatgtc
     1321 gtgatcggca aaacggtgcc cgacatctcg ctgaatgccg tcgccaatct cggctatgcc
     1381 gagttccgtt ggggcgtgcc ggtctatccc ggcgatacca tgtcggcgcg ctcgaccgtc
     1441 ctgggcttgc gcgagaattc caaccgcgcc agcggcgtcg tctgggtgcg ctcgacggga
     1501 gcgaaccaga agggcgagat ggtgctcgac tatgtgcgct gggtgatggt gcataagcgc
     1561 gatcccgcgg cggcggtcgg cgcgccggtg gtgccgaaga ccgcggtggc ggtcgcgccg
     1621 gcggatttga tcgtgccggc cgggctgacg ctttcggcct acgacgatgt cgccgccgga
     1681 tcgtcgtacc gctgggagga ctacgagccg ggcgaacgca tcgaccatgt cagcggcatc
     1741 acgctcgagg actccgacca tatgttctcg acgcggctct accagaatac cgcgcgcgtc
     1801 catttcgacg cctttgccgg caagaacacc cgcttcggcc gccgccttgc ctacggcggc
     1861 catatcattt cgctggcccg cgcgctgtcg ttcaatggac tggccaacgg cttccgggtt
     1921 gcggccatca acgccggcag ccatgtcgga ccgaccttcg gcggcgacac gatctatgcg
     1981 tggtctgagg tgctggacaa gtcgccgctg cccggccgcg aggatctcgg cgggctgcgc
     2041 gtgagaacca tcgccaccaa ggactgcccc tgcgaatcgt ggcccggcaa gcagaccgac
     2101 ggcaaatatc atcccgcggt cgtgctcgat ctcgactatt ggctgctgat gccgcggcgt
     2161 tgaggaattc cgcttggaaa tccgaggctt aacgtacggc gtacggcgac tttcgttgac
     2221 ttgagacggc acggcgctaa ataaagatca gccgatctcg gctattgagg ttttaacgcg
     2281 atgagcgtcg ccaaccggcc ggtgcatcgg ccgctttccc cgcatctgca ggtctacaag
     2341 tggcagctca cctccgtgct gtccatcctg catcgcgcca ccggcatcgc gctgtcggtc
     2401 ggggcgctct atctcgccct ctgggtgatg ttcgcggcgg cgagccccgt cacctacgcg
     2461 atgttccaga gcttcaatac ctcgatcgtg ggccgcatct tcctgggcgg ctggctgttc
     2521 tgcggcttct atcacctgtg caacggcatc cggcacctgt tctgggacgc cggctacggc
     2581 ttcgagctca gagacgccta tcgcagcggc tggacggtgg ttgccgtctc gctgatcgcc
     2641 acggccgctt cgtggatcgt cgggctgcgg ctggtgtgag gagaggcaga tgaacggcga
     2701 tctcaggacc cccctcgcgc gcgcccgcgg tctcggttcg gccaaggcgg gcgtgcacca
     2761 ctggtgggcg cagcggctta ccgccatcgc gctgatcccg ctcgtcgtgt ggttcgcgat
     2821 ctcgctggtg atgatgagcg gcgcggaata cgaggtcgtg cgcgcctgga tcggctcgcc
     2881 ggtcgtcatg gtgctgctga tcctgaccat cgcggtcggc ctgcatcacg cccagctcgg
     2941 catccaggtc gtgatcgagg actacgtgca cagcgacggt tttaagctgg cgctgatcgt
     3001 gctggtccgc tttctcgcgg tgttgttcgg gctggctgcc atcgtggcca tcttgagtat
     3061 cggattcgga ggctgaacat ggccgaggcg agcaacggca agagcaacgg cgccgcgccg
     3121 ggcacggtca ctatcggcgg caacgcctac aaggtgatcg atcacgagta cgacgtggtc
     3181 gtggtcggcg ccggcggcgc gggcctgcgc gccaccttcg gcatggcggc caagggactg
     3241 aagacggcct gcatcaccaa ggtgttcccg acccgcagcc acaccgtatc ggcgcagggc
     3301 ggtatctcgg ctgcactcgg caacatgggg ccggacgact ggcgctggca tat
//
LOCUS       DASWGA010000014         1625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1393971, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000014 DASWGA010000000
VERSION     DASWGA010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1393971"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            193..753
                     /locus_tag="VF991_00295"
     CDS             193..753
                     /locus_tag="VF991_00295"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEX9554897.1"
                     /translation="MISVLAGRPAVRVAVIAAYVLLVEWSRALVSTAPYAATAALILG
                     GVALVVSGAGWPLERLGIGKARLGFRILGGCALAVVLLMPAAARANAAPILPAFLALP
                     AVVVSIGEEVAFRGALYAALEDLGGAPVAIIASTALWTAAHALSHPPQFLFAVAAAGL
                     LLALWRWACKDLVGPIIGHVLADLAL"
     gene            750..1454
                     /locus_tag="VF991_00300"
     CDS             750..1454
                     /locus_tag="VF991_00300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554898.1"
                     /translation="MNRFLLLAGAVAVYVLAAWTVAPGFYDGFAPQQPYNWVCPPVHI
                     SGNLPPSSGHLVIKVINGVSDANSAFTDDGQVVIGFLPGAFDVTGKTSITVDIKPVSP
                     CPKPSGLTFAINTYLISADAPLAKKANLVMRYSDIVPAPSKVYRATSADGPWTSIGAL
                     NEAQPFTIDTTTDQFGYFSAGYPSNAVSHGGTGSQVLPIVIAALIILVLVAGIPLAMM
                     RRRQAPDEGEADDAEP"
BASE COUNT          233 a          584 c          495 g          313 t
ORIGIN      
        1 ctggatccga cgacggacgg gcgtcccgac tctcgcccaa gcgtccgcga gaaccaacca
       61 tcggtcggcg atctgcaggc ggatttcaac ttcaaccagg taccggccgc gcctctgatc
      121 ctcgatccgc accccgcgcc aggcccgcct tcttctatct aacgcctcat cgcgctcccg
      181 gataatcggt tcgtgatttc ggttctggcc ggtcgcccgg ccgtccgcgt ggcggtgatc
      241 gcggcctatg tcctgctcgt ggagtggtcg cgtgcgttgg tttcgaccgc cccgtacgcc
      301 gccaccgctg cgctgatcct cgggggcgtc gcgctggtgg tatctggcgc cggatggccg
      361 ctggaaaggc tcggcatcgg caaggcccgc ctcggcttta ggatcctcgg cggctgcgcg
      421 ctcgcggtgg tacttctcat gccggccgcc gcccgcgcga acgcggcgcc gattctgccg
      481 gcattccttg ccttgcccgc ggtcgtggtc tcgatcggcg aggaggttgc gttccgtggc
      541 gcactctatg cggcgctcga agatctcggc ggcgcgcctg tggcgatcat cgccagcacg
      601 gcgctgtgga cggcggccca tgccctctcg catccgccgc aattcctgtt cgcggtggcc
      661 gccgccggcc tcctcctggc cctttggcgc tgggcttgca aggacctggt cggcccgatc
      721 atcggccacg tcctcgcgga tctggcgctg tgaatcgatt tcttctgctg gccggcgccg
      781 tcgctgtcta cgtgctcgcc gcgtggaccg ttgcgccggg cttctacgac ggattcgcgc
      841 cacagcagcc ttacaactgg gtctgcccgc ccgtccacat ctctggaaac ctgccgccca
      901 gctccggtca tctcgtgatc aaggtcatca acggggtcag cgacgcgaac tcggcgttca
      961 ctgacgacgg tcaggtggtg atcggattcc ttccaggggc cttcgatgtc accgggaaaa
     1021 cctccatcac cgtcgacatc aagcctgtca gcccctgccc caagccatcc ggcctcacct
     1081 tcgccatcaa cacctacctc atcagcgcgg acgcgcccct ggccaagaag gccaacctcg
     1141 tcatgcgcta ctccgacatc gttccagcgc cgagcaaggt ctaccgtgcg acatcagctg
     1201 atgggccgtg gacgtcgatc ggcgcgctca acgaggcgca gcctttcacc atcgatacga
     1261 ccaccgacca gttcggctat ttctccgccg gctatccatc caacgccgtc tcgcacggcg
     1321 gcacgggcag ccaggtgctg ccgatcgtga tcgcggctct gattattttg gtgctcgtcg
     1381 ccggcatacc cttggcgatg atgcgccgcc gccaggcgcc agacgaggga gaggctgacg
     1441 acgccgagcc gtgaccggtt cggcactgct catcctcaat cgcgcttccg gcacggggca
     1501 taccgctcag atcgtcgatc agctgagtga cgcactccgt tcagggcacg gttccaagct
     1561 cgaagtcgag gcgatggttg tcgacagcca tcccaaggct cgctcggcag cggccgagtt
     1621 cgcgc
//
LOCUS       DASWGA010000015         6252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1266727, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000015 DASWGA010000000
VERSION     DASWGA010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6252
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266727"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(295..795)
                     /locus_tag="VF991_00305"
     CDS             complement(295..795)
                     /locus_tag="VF991_00305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554899.1"
                     /translation="MRYCIQPATSVDVAFLAAVMDENREQWTGDGEAVPIDRLLQTCA
                     CSAQIWAARDAEGTPTALWGVAPLSDDPHVGHLWMLACEAFDNDPEELQELSRLVFDE
                     MLNEFPRLENFIDARKVRAIAMLRSIGFAVEPAEAQAALDGDLHRVWIDSDRLHGGGR
                     AGMLPN"
     gene            complement(864..2033)
                     /locus_tag="VF991_00310"
     CDS             complement(864..2033)
                     /locus_tag="VF991_00310"
                     /inference="COORDINATES: protein motif:HMM:NF015012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-dopachrome tautomerase-related protein"
                     /protein_id="HEX9554900.1"
                     /translation="MVHRRSMLAGSVAFAALAAGRDLRAQTGQSPLGQSPLGQSQALA
                     PAAKPPSFRLEEAAHFDHQATGVAVSADGRIFVNFPRWTEDSPISVAEVGRDGALKPY
                     PDEKWNSWRNADAASRSPRDQFVCVQSVVADNRGNLWVLDPASPGNEKVIAGGAKLVR
                     IELASNTVAQVIHFGEAVALQGSYLNDVRFHPDGKTAFITDSGARGAIVLVDLETGEA
                     KPRLDGHPSTQPEKGVEVSVGGQKLQRPDGRAFQVAADGIALSRDGRTLYWQALTGRT
                     LYSIDTAALMSDNQDDVTKKVTKVGTTNIADGLLMSRDGHLYITAPEDSSIKVWTGDR
                     AETVIADPQLSWPDSLAEHPDGSIYVTASRLHEMRWFRPDAPNVLPTRLFRLVRL"
     gene            2120..2668
                     /locus_tag="VF991_00315"
     CDS             2120..2668
                     /locus_tag="VF991_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554901.1"
                     /translation="MPDMPMPDVQALRFEDDGETPNNPRLPLVVYRGAVNLAGARDPA
                     VPFERAFARHGWSDGWRDGIHPFLHFHTTTHEVLGIARGRATVEFGGAKGQVLTVEAG
                     DAVVLPAGTGHRRIEATDDLVVVGAYPRNASVDQRRPGQVDHHKALAAIAKVPMPEMD
                     PIHGETGPLMQLWKAERVTKLR"
     gene            complement(2680..4089)
                     /locus_tag="VF991_00320"
     CDS             complement(2680..4089)
                     /locus_tag="VF991_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007534578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HEX9554902.1"
                     /translation="MPLPRRTLLAGTAGLALASLAPRLAEAAGQKTLRLTNRVIEVAG
                     KPATRYGVFQPSGAWGLTLDEGDRFDVRLENTLDVPSGLHWHGLNPPWRQDGVPYISA
                     PPVAPGKHADYNFVPQPAGTRWMHSHFGLQEQSLLAAPLIVREASAIKSGIQEAVILL
                     EDFSWSKPSMLLEELRKPKPAMSMPGGSGGMNMSAGAKMDLNDIAYDAFLANDRTLAD
                     PQIFDVEKGAEVRLRIINAAASTNFMIDLGAIEGTVVTVDGNPVAPLKVRQFPLAIAQ
                     RVDIVVRLPDDGKSVPVLARGEGRPLQTGVVLRPPGAAVAKIMDMATMAAPPITLMDE
                     TKLRALQPYANRPVDRSVPVDLTGTMMGYVWGMEVHGMGGAPVTVAKGERVELAMRNT
                     TMMSHPMHLHGHSFQVTEINGQSFPGAVRDTVLVPPRTTVKVVFDADNPGLWAYHCHN
                     LYHMAAGMFTTLVYEGGFT"
     gene            complement(4103..4543)
                     /locus_tag="VF991_00325"
     CDS             complement(4103..4543)
                     /locus_tag="VF991_00325"
                     /inference="COORDINATES: protein motif:HMM:NF018748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9554903.1"
                     /translation="MAVQALREDAPHNPRTVDEARALVKRVEGLFMPWNIDALVDGFT
                     EDCVVRFGTVAQFRGRETLRAFFTTRSRRQKNYRLTKQLRSLSGDTLTNVWTGAWKDA
                     ETGTPMKGFGVEVWTMRDGKVAVWEAAFNVGRADETTNVADMLR"
     gene            complement(4564..5658)
                     /locus_tag="VF991_00330"
     CDS             complement(4564..5658)
                     /locus_tag="VF991_00330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9554904.1"
                     /translation="MTTRRNFLKGGTAAATGIVFCSCGLLERAHAQAGMRTLPIAVNG
                     KKVKTIDVHAHCHFREAGALLGAEAASLQLPPVRDAQEAFIEIDKRLKAMDAQAVDME
                     VLSINPFWYGRDRDLATQIVKIQNEKLAELCASKPDRFAAFASLTLQAPDLAVQELET
                     AVKKQGLKGAAIGGGVAGVELSDPKFHPVWAKAEELGVPLFIHPQGVPEASKRLAGNG
                     WLGNTIGNPLETTIALSHLIFEGTLDRFPGLKVIAAHGGGYLPSYADRSDHACMVSPA
                     GCNANIKLQKKPTEYLKQLYFDSLIFSPEAIRHLAAQVGASQIVLGSDYPYRWQDHPV
                     DHIFACDSLSDDQKMAVLGTTAAKLFGIKA"
     gene            complement(5716..>6252)
                     /locus_tag="VF991_00335"
     CDS             complement(5716..>6252)
                     /locus_tag="VF991_00335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554905.1"
                     /translation="YVLTRTAVHLGMTAELTRDFAFMKLSPSALSRPGAPEWNAAPMA
                     VSVDGVEGNGTILMDTGINYMFLSPPAGTPLVPGTRAPMGTKIAVYLPDRRTPQPAFY
                     AFTVGERSNPSQPEKVEVVGDRGVFVNTGRLFLEGFDYLYDAAGGYVGFGWNRRLGAT
                     SGGVTPGLSVAPVSARPE"
BASE COUNT         1038 a         2040 c         2120 g         1054 t
ORIGIN      
        1 gtccttggcg tacttctcca tggcgtcgga caccgacagg cgtatcgcct gcaggcgctt
       61 ggcgacttcg ccaggcttct tggtatcgcg gccgctgtct tgcgagcggc tggccgcggc
      121 atcggccgat gcaaggctca cggaaaggcc aagggcgccg gccggcaaca aggcagccaa
      181 agcgcgagcg gaacgacgat cctgggccat gtgatctccc ctctccctgg agagccacgt
      241 tacccagact tgcaatccac cggcaaatga aaagacaggg tcagaaccaa agggtcaatt
      301 cggcagcatg ccggcacggc cgccgccgtg cagccgatcg gagtcgatcc acacgcgatg
      361 aaggtcgccg tcaagggccg cctgggcctc ggccggctcg acggcaaagc cgatcgagcg
      421 cagcatggcg atggcgcgca ccttgcgcgc atcgatgaaa ttctccaatc gcgggaactc
      481 gttcagcatt tcatcgaaca ccagtcgcga cagttcctgc agttcctcgg gatcgttgtc
      541 gaacgcctcg caggccagca tccacagatg gccgacatgc gggtcgtccg ataacggcgc
      601 gacgccccac agcgcggtcg gtgtgccttc ggcatcgcgg gcggcccaga tctgggcgct
      661 gcacgcacag gtctgcaaca gtcggtcgat cggcacggct tcgccgtcgc ccgtccactg
      721 ctcgcgattt tcgtccatca cggcagcgag aaaggccacg tccaccgaag tcgcgggctg
      781 aatgcaatat cgcatcaccg tctccttggg acacaacgag tcaaccggca gaggcggcgg
      841 atgttccgtc gatcacgaac ctgctacagg cggacgagac ggaacaaacg ggtcggcagc
      901 acgtttgggg cgtccggccg gaaccaccgc atctcgtgca ggcgcgaggc cgtgacgtag
      961 atcgagccgt caggatgctc cgccaagctg tccggccagc tgagctgcgg gtcggcgatc
     1021 accgtctcgg cgcggtcgcc tgtccacacc ttgatcgagc tgtcttccgg cgcggtgata
     1081 taaaggtgac catcgcggct catcagcagt ccatcggcga tgttggtggt gccgaccttg
     1141 gtgactttct tcgtcacgtc gtcctggttg tcggacatca atgccgcggt atcgatgctg
     1201 tagagcgtgc ggccggtcag cgcctgccaa taaagcgtcc ggccatcgcg cgacaaggca
     1261 atgccgtcgg cggcaacctg gaaggcgcgc ccatccggac gctgcagctt ctgtccgccg
     1321 accgaaacct cgacaccctt ttcgggctgc gtgctcggat ggccgtcgag cctcggcttg
     1381 gcctcgccgg tttcgaggtc gaccaggacg atcgcgccac gagcgccgga atcggtgatg
     1441 aaggcggtct tgccgtcggg atggaagcgc acgtcgttca ggtagctgcc ttgcaacgcc
     1501 acggcctctc cgaagtggat cacctgcgcc accgtgttgg aggcaagctc gatgcgcacc
     1561 agcttggcac cgccggcgat gaccttttcg ttgcccggcg aggcggggtc gagcacccag
     1621 agattgccgc gattgtcggc caccaccgac tgcacgcaca cgaactggtc acgcggcgac
     1681 cggctggcgg cgtcggcgtt gcgccaggaa ttccactttt cgtcggggta gggttttagc
     1741 gcgccgtcgc ggccgacttc ggcgaccgag atcgggctgt cttccgtcca gcgtggaaaa
     1801 ttgacgaaga tgcgtccgtc ggccgatacc gccacgccgg tcgcctgatg gtcgaaatgg
     1861 gccgcttctt cgagtcggaa cgacggcggt ttggcggctg gcgccaaggc ttgagactgg
     1921 ccgagcgggg actggccaag aggtgactgg ccagtctggg cgcgaagatc gcgccccgcg
     1981 gccagggcgg cgaacgccac gctgccggcg agcatggatc gacggtggac cattggcctt
     2041 tcccggtgaa gactccgatc ctcaagtcaa cgccctggcg tttcgcaggt tgcccagggg
     2101 gaacgaagga ggaccggcga tgcccgacat gcccatgcct gatgtgcaag ccttgcgttt
     2161 cgaggatgac ggcgaaacgc ccaacaatcc ccgcctgccg ctcgttgttt accgtggcgc
     2221 cgtgaacctt gccggtgcac gcgatccggc ggtgccgttc gagcgggcgt tcgccaggca
     2281 tggctggagc gacggctggc gcgacggcat ccatcccttc ctgcatttcc acaccacgac
     2341 gcatgaggtg ctgggcattg cgcgcggccg cgccacggtc gagttcggcg gcgccaaagg
     2401 acaggtgctc accgtcgagg caggcgacgc ggtcgtgctg ccggcgggca ccggccatcg
     2461 gcgtatcgaa gcgaccgacg atctcgtggt cgtcggcgcc tacccgagga acgcttcggt
     2521 cgatcagcgg cgacccggcc aggtcgatca ccacaaggcg ctggccgcga tcgccaaggt
     2581 gccgatgccg gagatggacc cgatccacgg cgagaccgga ccgctgatgc agctatggaa
     2641 ggccgaacgt gtcaccaagc tgaggtgaca ctgcttggct caggtgaagc cgccttcata
     2701 gaccagcgtc gtgaacatgc ccgccgccat gtggtagaga ttgtggcagt ggtaggccca
     2761 taggccggga ttgtcggcgt cgaagacgac cttcacggtc gtgcgcggcg gcaccagcac
     2821 ggtgtcgcgc accgcgcccg ggaaggactg gccattgatc tccgtcacct ggaaggaatg
     2881 gccgtgcagg tgcatgggat gggacatcat ggtcgtgttg cgcatcgcca gctcgacccg
     2941 ctcgcccttg gccaccgtca ccggtgcgcc gcccatgcca tgcacctcca tgccccagac
     3001 atagcccatc atggtgccgg tgaggtcgac cgggacggag cggtcgaccg gccggttggc
     3061 atagggctgc agggcgcgca gcttcgtctc gtccatcagg gtgatcggcg gagcggccat
     3121 cgtcgccatg tccatgatct tggccacggc ggcgcccggc gggcgcagca ccacgccggt
     3181 ctgcagcggc cgaccctcgc cgcgcgccag caccggcacc gatttgccgt cgtcgggcag
     3241 gcgcaccacg atgtcgaccc tctgcgcgat cgccagcgga aactgccgca ccttgagcgg
     3301 cgccaccgga ttgccgtcga ccgtcaccac cgtgccctcg atcgcgccga ggtcgatcat
     3361 gaaattggtc gaggccgcgg cgttgatgat gcgcagccgc acctcggcgc ctttctcgac
     3421 gtcgaatatc tgcggatcgg cgagcgtgcg gtcgttggcc aggaaggcgt cgtaggcgat
     3481 gtcgttgaga tccatcttcg cgccggccga catgttcatg ccgccgctgc cgcccggcat
     3541 gctcatggcg ggcttgggct tgcgcagctc ctcgagcagc atcgagggtt tgctccagga
     3601 gaagtcctcg agcaggatga cggcctcctg gatgccgctc ttgatcgcgc tcgcctcgcg
     3661 cacgatcagc ggggcggcga gcaggctctg ctcctgcaac ccgaaatgcg aatgcatcca
     3721 gcgagtgccg gcaggctggg gcacgaagtt gtagtcggca tgcttgcccg gcgcgacggg
     3781 cggcgccgaa atgtagggaa ccccgtcctg gcgccacggc gggttgagcc cgtgccaatg
     3841 cagccccgac gggacgtcga gcgtattctc gagccggacg tcgaacctgt cgccctcgtc
     3901 gagcgtgagg ccccaggcgc cggacggctg gaagacgccg tagcgcgtgg cgggcttgcc
     3961 ggcgacctcg atgacccggt tggtgagccg cagcgtcttc tggcccgccg cctccgccag
     4021 acgcggcgcc agcgaggcga gcgcaaggcc cgcggtgccg gcaagcagag ttcggcgcgg
     4081 cagcggcatg gggtgccgat cgctatcgca gcatatcggc aacgttcgtc gtctcgtcgg
     4141 cgcgaccgac gttgaaggcc gcctcccaga cagcgacctt gccgtcgcgc atggtccaga
     4201 cctcgacgcc gaagcccttc atcggcgtcc ctgtctcggc atctttccag gcgccggtcc
     4261 atacattggt gagcgtgtcg cccgagagcg agcggagctg cttggtcagc cggtaattct
     4321 tctgccgccg gctgcgcgtg gtgaagaagg cgcgcagggt ctcgcgtccg cggaactgcg
     4381 caacggtgcc gaagcgcacg acgcagtcct cggtgaagcc gtcgaccagg gcgtcgatgt
     4441 tccagggcat gaacagccct tcgacgcgct tcaccaaagc ccgcgcctcg tcgacggtgc
     4501 gggggttgtg cggcgcgtct tcgcgcaaag cttggacagc catgacttcc tcccgtcttc
     4561 gccctaggcc ttgatgccaa acagcttcgc agcggtggtg ccgagaaccg ccatcttctg
     4621 atcgtcgctg agcgagtcgc aggcaaagat gtggtcgacc ggatggtcct gccagcgata
     4681 gggatagtcg ctgcccagca cgatctggct ggcgccgact tgggccgcga ggtgacggat
     4741 cgcctcgggc gagaagatca gcgagtcgaa atagagctgt tttagatact cggtcggctt
     4801 cttctgcagc ttgatgttgg cgttgcagcc ggccgggctg accatgcagg catggtcgga
     4861 gcgatcggca taggacggca ggtagccgcc gccatgcgcg gcgatgactt taaggccggg
     4921 gaagcggtcg agcgtgccct cgaagatcag gtgcgacagc gcgatcgtgg tttccagcgg
     4981 attgccgatg gtgttgccga gccagccgtt gcccgccagc cgcttgctgg cctccggcac
     5041 gccttgcgga tggatgaaca gcggcacgcc gagctcctcg gccttggccc acaccggatg
     5101 gaacttggga tccgaaagct ccacaccggc gacgccgccg ccgatggcgg cgcccttcag
     5161 cccctgcttc ttcaccgcgg tctcgagttc ctggacggcg aggtcgggcg cctgcagggt
     5221 gagcgaggca aaagcggcga agcgatcggg cttggaggcg cagagctcgg ccagcttctc
     5281 gttctggatc ttcacgatct gggtggcgag gtcacggtcc ctgccatacc agaaggggtt
     5341 gatcgacagc acctccatgt cgaccgcctg cgcgtccatc gccttcaatc gcttgtcgat
     5401 ctcgatgaag gcttcctggg catcgcgcac gggcggcagc tggagtgacg ccgcctcggc
     5461 gcccaagagc gcgccggctt cgcggaaatg gcaatgcgcg tggacgtcga tggtcttgac
     5521 cttcttgccg ttgacggcga tgggcagggt gcgcatgccg gcttgcgcgt gcgcgcgctc
     5581 gagcaggccg cagctgcaga aaacaattcc ggtcgcggca gcagtgccgc ccttgaggaa
     5641 gtttcggcgc gtcgtcatcg gcatccctcc caggactcgg ccggcgtttt cgccggcacg
     5701 ccggcaagtc tagcgctact cgggccgcgc cgaaaccggc gccaccgaaa ggcccggtgt
     5761 gactccgccg gacgtggcgc cgagccggcg gttccagcca aagccgacat aaccgccggc
     5821 cgcgtcgtag agatagtcga agccttcgag gaacaaccgt ccggtgttca cgaacacgcc
     5881 gcgatcgccc accacctcga ccttttccgg ctgcgacgga ttggagcgtt cgccgacggt
     5941 gaaggcatag aacgcaggct gcggggtgcg cctgtcgggc aggtagaccg cgatcttcgt
     6001 gcccatcggc gcccgcgtgc cgggcaccag cggcgtgccg gcgggcggcg acaggaacat
     6061 gtagttgatg ccggtatcca tcaggatcgt gccgttgccc tcgacgccgt cgaccgacac
     6121 cgccatcggt gcggcgttcc attccggtgc accgggccgc gacagggcgc tgggcgaaag
     6181 cttcatgaaa gcgaagtcgc gtgtgagttc tgccgtcatg ccgagatgca cggccgtgcg
     6241 ggtgaggacg ta
//
LOCUS       DASWGA010000016         2603 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1140895, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000016 DASWGA010000000
VERSION     DASWGA010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1140895"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..729)
                     /locus_tag="VF991_00340"
     CDS             complement(4..729)
                     /locus_tag="VF991_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018073340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HEX9554906.1"
                     /translation="MIDLHYWPTPNGKKVTILLEECGLPYKIVPVNIGRGDQFKADFL
                     EMNPNHRMPVMVDHEPKGGGKPIAVFESGSIMMYIAEKVGKFWPQDVRTKYEVNQWVV
                     WQMANQGPKSGECGHFRRVDQAQFGDQKYAITRFTDEVNRLYGVLNNRLYKHKYLAGD
                     QYTIADMICYPWTVNWKFQGQDIEEFKHFKRWFEELGARPAVQKGMAVGADLSVDNTK
                     LPAEEQARIRKMLYNQRARPVPA"
     gene            801..>2603
                     /locus_tag="VF991_00345"
     CDS             801..>2603
                     /locus_tag="VF991_00345"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9554907.1"
                     /translation="MIGRSVRRLEDARFLTGRGRYVADIASAGDLHGHVLRSPHAHAL
                     IERIDVSRAAAFAGVHGVYTAADLAADGVGPLPCMAAVKPLIVPPRTALAERRVRHVG
                     DPVAFIVADSEAIAREAAELVEIDYSPLASVVDGTMALAAGAPALWDEAPGNLAFQVR
                     RGDAEAVARAMQKAAHVVEVEVMNNRIVVAPLEPRAGIARYHASTQTMELELTGQGLH
                     GIRRQLAEFVFKLPLERFHLHAPDVGGGFGMKNFLYPEWVLLLWAARKLGRPIRWVAE
                     RAEEFVTGAQGRDIAARAKLALDATGRVLALDVAMVANMGAYLSGNGPGASVVAASTA
                     QGGVYDIPAIHVDVRGAFTNTVPVDAYRGAGKPEANYIIERALEAAARRLGRAPAALR
                     RQNLIASFPHKTALGMAIDSGGFVANLDAALARADVAGFETRRSASAKAGRLRGIGVG
                     CFLETSRGAPNEGAELRFENDGRVTIAVGTESNGQGHETAYAQIAADRLGLPMATFRY
                     VQADTSAVKSGAGHGGARSMHMGGAAVVKAIDAVLAKARKLAAHLLQASVDELDFAAG
                     RFSVRGSDRGIGLMALAESARDPASLPDGMMPGLG"
BASE COUNT          381 a          863 c          902 g          457 t
ORIGIN      
        1 gccctacgca ggcaccggcc gggcgcgctg gttgtagagc atcttgcgga tgcgggcctg
       61 ttcctcggcc ggcagcttgg tgttgtcgac cgagaggtcg gcgccgaccg ccatgccctt
      121 ctgcaccgcc ggccgcgcgc ccagttcctc gaaccagcgc ttgaagtgct tgaactcctc
      181 gatgtcctgg ccctggaact tccagttcac cgtccacggg tagcagatca tgtcagcgat
      241 cgtgtactgg tcgccggcca gatacttgtg cttgtagagc cggttgttga gcacgccgta
      301 gagacgattc acctcgtcgg tgaagcgcgt gatggcatat ttctggtcgc caaactgcgc
      361 ctggtcgacg cgccggaagt ggccgcactc gccggacttc gggccctggt tggccatctg
      421 ccagaccacc cactggttca cttcgtactt ggtgcgcaca tcctgcggcc agaatttccc
      481 gaccttctcg gcgatgtaca tcatgatcga gcccgattcg aacaccgcga tcggcttgcc
      541 gccgcccttc ggctcgtgat cgaccatcac cggcatgcga tggttgggat tcatttccag
      601 gaagtcggcc ttgaactggt cgccgcgtcc gatgttcacg ggtacgatct tgtagggcag
      661 gccgcactct tcgagcagga tggtgacctt cttgccgttg ggcgtcggcc agtagtgcag
      721 atcgatcatg gggtcctcct tggatcgggc gggagcttat cgggcggagc ggcatgggca
      781 agagcgctga agcaaacgtg atgatcggcc gttcggtgcg gcgtctggag gacgcccgtt
      841 tcctgaccgg ccgcgggcgc tacgtcgccg acattgccag tgcaggcgat ctgcacggcc
      901 atgtgctgcg ttcgccgcac gcccatgccc tcattgagcg gatcgatgtt tcgcgggccg
      961 cggcgttcgc gggcgttcac ggcgtctata cggcggccga tctggcggcc gacggagtgg
     1021 ggccactgcc gtgcatggcc gcggtcaagc ccttgatcgt gccgccgcgc acggcgctgg
     1081 cggagcgccg cgtgcgccat gtcggcgatc cggtggcctt catcgttgcc gacagcgagg
     1141 cgatcgcgcg cgaggcggcg gaattggtcg agatcgatta ttcgcccctg gcctcagtcg
     1201 tcgacgggac gatggcgctg gccgccggag cgccggcgct ttgggacgaa gcgccgggca
     1261 atctcgcctt tcaggtccgg cgcggcgacg ccgaggccgt cgcccgggcc atgcagaagg
     1321 cggcgcacgt cgtcgaggtc gaggtgatga acaaccgcat cgtcgtggcg ccgctggagc
     1381 cgcgcgccgg cattgcccgc tatcatgcct cgacgcagac gatggaactc gaattgaccg
     1441 ggcaggggtt gcacggcatc cgccgccagc tcgccgagtt cgtcttcaag ctgccgctcg
     1501 agcgcttcca tttgcatgcc cccgatgtcg gtggcggctt cggcatgaag aacttcctct
     1561 atcccgaatg ggtgctgctg ctgtgggcgg cacgcaagct tggccggccc atccgatggg
     1621 tcgccgaacg ggcggaggag ttcgtcaccg gcgcacaggg tcgcgatatc gccgccaggg
     1681 cgaagctcgc gctcgatgcg acgggccggg tcctggcgct cgacgtggcg atggtggcca
     1741 acatgggcgc ttatctgtcg ggcaacggcc ccggcgcttc ggtcgtcgcc gcgtcgacgg
     1801 cgcagggcgg cgtctacgac attcccgcga tccatgtcga cgtgcgcggc gccttcacca
     1861 acaccgtgcc ggtcgatgcc tatcgcggcg ccggcaagcc cgaggccaat tacatcatcg
     1921 agcgtgccct cgaagcggcg gcgcgccgac tcgggcgcgc tcccgccgcc ctcaggcggc
     1981 agaacctgat cgcctcgttt ccgcacaaga cggcgctggg catggcgatc gattccggcg
     2041 gcttcgtcgc caatctcgac gccgccctgg cgcgcgccga cgttgcaggc tttgagacac
     2101 ggcgatcggc ctcggcgaag gcgggcaggc tgcgcggcat cggcgtcggc tgcttcctcg
     2161 aaacctcgcg cggcgcgccc aacgaaggcg cggagctgcg attcgagaat gacggcaggg
     2221 tgacgatcgc cgtcggcacg gagtccaacg gccagggcca cgaaaccgcc tatgcccaga
     2281 tcgccgccga ccggctcggc ctgccgatgg cgacgtttcg ctatgtccag gccgacacct
     2341 cggcggtgaa gagcggcgcc ggtcacggcg gcgcgcggtc catgcacatg ggcggcgcgg
     2401 ccgtcgtcaa ggcgatcgac gcggtgctgg ccaaggcgcg caagctcgcg gcacatctcc
     2461 tgcaggcctc tgtcgacgag ctcgacttcg cagcaggacg tttcagcgtg cgcggcagcg
     2521 accgtggcat cggcctgatg gcgctggctg aaagcgcgcg cgatccggcg agcttgcccg
     2581 acggcatgat gcccgggctg ggc
//
LOCUS       DASWGA010000017         3260 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1141039, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000017 DASWGA010000000
VERSION     DASWGA010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1141039"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..419
                     /locus_tag="VF991_00350"
     CDS             87..419
                     /locus_tag="VF991_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX9554908.1"
                     /translation="MSKPPAPSPRDALRSFAPKLIDLTDNVLFGDVWERPGLSKRDRS
                     LITCAALIAMNRTEQQTGHFTRAINNGVKKEELIELITHLAFYSGWPTAMSAANVAKK
                     VLEGGDQK"
     gene            416..1348
                     /locus_tag="VF991_00355"
     CDS             416..1348
                     /locus_tag="VF991_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015918521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX9554909.1"
                     /translation="MKLCYFNDYRLGVIEADTVVDVTDAVKDIPHLHNRDLIIGLIEK
                     WDSHRAKVEKAAASTTAMPLRNVRLRPPVPRPGNIVCMAVNYMEDGTLKEKPQINAFH
                     KAPTAVIGEGDTMVLPDVPATIFEGEAELALVIGKRATRVSQADAMKHIFGYTCFIDG
                     SARGLPPPGNVFFQMKSRDTFAPIGPCIVTADEIADPQNLAITLKNNGEVMQKFNTSD
                     MAHQIPRCIEWVSSIHTLEPGDILATGTNHRGLNSFMDGDKIELTVEKVGTLHITVKD
                     EHKRTWARTTRLQHKEKGAEGAHTPQLTGKHAQK"
     gene            complement(1495..1944)
                     /locus_tag="VF991_00360"
     CDS             complement(1495..1944)
                     /locus_tag="VF991_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HEX9554910.1"
                     /translation="MRTFDYSPFYRATVGFDRVFDLLDSAASQSGANGYPPYNIEKAG
                     NDAYRIVMAVAGFAEAELNVTQKENELLVTGQTAQNGQDDRQYLYRGIAGRNFERRFQ
                     LADHVKVVGAKLANGLLTIELQREIPEEKKPRAIAIEAEAAKAALTH"
     gene            2278..>3260
                     /locus_tag="VF991_00365"
     CDS             2278..>3260
                     /locus_tag="VF991_00365"
                     /inference="COORDINATES: protein motif:HMM:TIGR01470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX9554911.1"
                     /translation="MKHLPLFFDLSGRKVVVVGEGAAADRRAALAGSAGAKIQRIPPS
                     AVEASDFRGAAAAFIATGDADRDAAAQRLAKSAGVPVNVADRPSLCDFILPAIVDRDE
                     VVVAISTGGASPTLATVLRGRIEAALPQRIGAVARLAATFRAQVNALIGEPNRRRAFW
                     RRLVEGPAGRLALAGDDAGARRSALGELDAARRRMAPVGIAHIVGAGPGDPDLLTLRA
                     AQLLQEADAILHDDLVPSAILARARRDAELVPVGKRKGRAGWTQADFNAELVRRVRAG
                     QTVVRLKAGDPFIFGRGGEEVEALRDAGLPVAVVPGITAALGCAASAGIPLT"
BASE COUNT          562 a         1133 c         1033 g          532 t
ORIGIN      
        1 gcaatggggt gaccgcccgc ccgaccgctt catcggtcac gccagcccct gaacaaacga
       61 ctactgagta agaaggagga aaaatcatgt caaaaccacc ggctcccagc ccgcgcgacg
      121 cgctgcgctc gttcgcgccc aagctgatcg acctcaccga caacgtgctg ttcggcgatg
      181 tctgggaaag gcccggcctt tccaagcgcg atcgcagcct catcacctgc gccgccctga
      241 tcgccatgaa ccgcaccgag cagcagaccg gccatttcac gcgcgcgatc aacaacggcg
      301 tcaagaagga ggagctgatc gagctgatca ctcatctcgc cttctattcc ggatggccca
      361 ccgccatgtc ggcggccaat gtcgccaaaa aagtgcttga aggaggagac cagaagtgaa
      421 gctctgttat ttcaacgact atcgcctggg cgtgatcgag gccgacaccg tcgtcgacgt
      481 caccgacgcc gtgaaggaca tcccgcatct ccataatcgc gacctgatca tcggcttgat
      541 cgagaagtgg gattctcaca gggccaaggt cgagaaggcg gctgcctcga ccacggccat
      601 gccgctcagg aacgtgcgcc tgcgtccgcc ggtgccgcgg ccgggcaaca tcgtctgcat
      661 ggcggtgaac tacatggagg acggcacgct caaggagaag ccgcagatca acgccttcca
      721 caaggcgccg acggcggtga tcggcgaggg tgacaccatg gtcctgcccg acgtgccggc
      781 caccatcttc gagggcgagg ccgagctggc gctggtgatc ggcaagcggg ccacccgggt
      841 ttcccaggcc gacgccatga agcacatctt cggctatacc tgcttcatcg acggctcggc
      901 gcgcggcctg ccgccgcccg gcaacgtgtt ctttcagatg aagtcgcgcg atacctttgc
      961 gccgatcggc ccgtgcatcg tcacggccga cgagatcgcc gatccgcaga acctcgccat
     1021 cacgctcaag aacaacggcg aggtcatgca gaagttcaac acctcggaca tggcccatca
     1081 gatcccgcgc tgcatcgaat gggtgagctc gatccacacc ctcgagcccg gcgacatctt
     1141 ggccaccggg accaaccatc gcgggctcaa ctccttcatg gacggcgaca agatcgagct
     1201 caccgtcgag aaggtcggca cgctgcacat caccgtgaag gacgagcaca agcgcacctg
     1261 ggcgcgcacc acgcgtcttc agcacaagga gaagggcgcc gagggcgcac atacgccgca
     1321 actcaccggc aagcacgcgc agaagtgaca gcgaagctgt catcccgagg ccgcaggctg
     1381 agggatcttt tactgatccg taaaggtccc tcgcttcgct cgggatgaca gccgccgcaa
     1441 tgaaaaaggc gccgcggttt cccgcggcgc cctttcccag acgcaggctg gaccttagtg
     1501 ggtcagcgcc gccttggcgg cctcagcctc gatggcgatc gcccggggct tcttctcctc
     1561 cgggatctca cgctgcagct cgatcgtcag caggccgttg gccagcttcg cgcccacgac
     1621 cttcacgtgg tcggcgagct ggaagcggcg ctcgaaattg cgcccggcaa tgccgcgata
     1681 gagatactgc ctgtcgtcct ggccgttctg cgccgtctgg ccggtgacca ggagctcgtt
     1741 ctccttctgg gtcacgttga gctcggcctc ggcgaagccc gccaccgcca tcacgatccg
     1801 gtaggcatca ttgcccgcct tctcgatgtt gtacggcgga tagccgttgg cgccggactg
     1861 gctggccgcc gaatcgagca ggtcgaagac ccggtcgaag ccgacggtgg cgcgatagaa
     1921 cggggaatag tcgaaggttc gcatgatcat catcctccaa tgagcgatgt ggttgacgcc
     1981 cccgccccgg aatgggcacg ggggacggcc ttgatttagg tggggtcttc cagccgtcaa
     2041 gggggcgaaa aatttccttc ccgggggagc aggcggcaag aaatgctcgt tcgccgcgga
     2101 ccttcggcaa ttcaagtcat ggcgaatgtg cgaagacacg ccaaatccct ctgtagatcc
     2161 aagcggtgtc ggcatgtcca agttcttccg caattcagag gccgttctgt gggccttctc
     2221 gatctcccag gcggtggcca tgctggcctt caacctgctg ttgcgggccg ccgtctcgtg
     2281 aagcacctgc cgctgttctt cgatctttcg ggccgcaagg tcgtggtggt gggcgagggg
     2341 gccgctgccg accggcgggc cgcgcttgcc ggttctgccg gcgccaaaat tcagcgcatc
     2401 cctccatcgg ccgttgaggc atcggacttc cgcggcgccg ccgccgcttt catcgccacc
     2461 ggcgatgccg accgcgacgc cgccgcccag cgcctggcca agtcggccgg cgtgccggtg
     2521 aacgtcgccg accgtcccag cctttgcgat ttcatcctgc cggcgatcgt cgaccgcgac
     2581 gaggtcgtgg tggcgatctc gaccggcggc gcctcaccga cgctggccac cgtcctgcgc
     2641 ggccgcatcg aggcggcact gccgcagcgc atcggcgccg tggcgcggct ggccgccacg
     2701 ttccgcgccc aggtcaacgc cctgatcggc gaacccaacc ggcgccgcgc cttctggcgt
     2761 cgcctggtcg aagggccggc ggggcgcctg gcgctggctg gcgacgatgc cggcgcgcgc
     2821 cgcagcgcgc tcggcgagct tgatgccgcg cggcggcgaa tggcgcccgt cggcatcgcc
     2881 catatcgtcg gcgctggccc cggcgatccc gatctgctga ccctgcgcgc cgcccagctc
     2941 ctgcaggagg ccgatgccat cctgcacgac gatctggtgc catccgccat cctggcccgc
     3001 gcccgccgcg atgccgaact cgtcccggtc ggcaaacgca aaggccgcgc cggctggacg
     3061 caggccgact tcaatgccga acttgtgcgc cgcgtgcgcg ccggccagac ggtcgtgcgg
     3121 ctgaaggcgg gcgatccctt catattcggc cgcggcggcg aggaagtcga agccttgcgc
     3181 gacgctggcc tgccggtcgc cgtcgtgccg ggcatcaccg ccgcactcgg ctgcgccgcc
     3241 tcggccggaa tccccctgac
//
LOCUS       DASWGA010000018         2835 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1394358, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000018 DASWGA010000000
VERSION     DASWGA010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2835
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394358"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="VF991_00370"
     CDS             <1..342
                     /locus_tag="VF991_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonoacetate hydrolase"
                     /protein_id="HEX9554912.1"
                     /translation="VYLPAGTTAAEMAAKLKAMAGIEAALSKQDAASRFELPADRLGD
                     LVVVSTKHKVLGTSAARHDLSGLTEPLRSHGGVSEQKVPLLCNRKLAADAASRHWRNF
                     DAFDLALNLVA"
     gene            352..1800
                     /gene="phnY"
                     /locus_tag="VF991_00375"
     CDS             352..1800
                     /gene="phnY"
                     /locus_tag="VF991_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonoacetaldehyde dehydrogenase"
                     /protein_id="HEX9554913.1"
                     /translation="MDTLSRTDVRHETLRIAGRKVETKARLDVRFPWDNRLVGSVPRA
                     TPELVAEAFRIAHTYKPRLTRYQRQQILLKTAELLAARKAELSRLITLESGLCLKDSL
                     YEVGRAFDVFTFAGQLCLLDDGQTFSCDLTPHGKSRKIFTLRQPLNAISAITPFNHPL
                     NMVAHKLAPAFATNNCVVLKPTELTPLTALFLADTLYEAGLPPEMLSVITGNPADIGD
                     AMITDPHADLITFTGSVRVGKHIAASAGYKRLVLELGGNDPLIVMEDADLDRAADLAV
                     AGATKNSGQRCTAVKRILVIDSVADAFIERVLAKAKKLKAGDPLDRETDIGTVIHERA
                     ATLFQNRVSEAVAKHGAKLLFGNDRKGALFPPTVVDHVDPACELVREETFGPVIPIIR
                     VKDIDHAIKVSNGTAYGLSSGVCTDRLDYVTRFVDELEVGTVNVWEVPGYRIEMSPFG
                     GIKDSGLGYKEGVLEAMKSFTNVKTWSLPWPG"
     gene            1880..2239
                     /locus_tag="VF991_00380"
     CDS             1880..2239
                     /locus_tag="VF991_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX9554914.1"
                     /translation="MPDAQTYSGSCHCGAVAYTVEVDPAQAMKCNCSICTRLGAVWAF
                     APKTKFKLTSDEAEQGDYQFNKKRLHHRFCTERGIESYAEGTGPDGSPTVGINLRCLE
                     GVDVEKLSPRLYDGRSA"
     gene            complement(2166..>2835)
                     /locus_tag="VF991_00385"
     CDS             complement(2166..>2835)
                     /locus_tag="VF991_00385"
                     /inference="COORDINATES: protein motif:HMM:NF013539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX9554915.1"
                     /translation="GDTGADPKSAFDLTIATHQQAMEKLRRDVRPALFKAAVDRLAAA
                     RRVMVFGIGPSAAIAQYFAFQLNRFGIAAGCLSDTGQSLADGLHRLRRGDLLVLLAYT
                     RPTPELEALLDRADQLGMAKILLSDSLGTVLAGRIDLSLAVERGGADRISLHTATLAL
                     LEALLVGVAAKRPEETVKSLKQLDDLRARLAGNAARNDARRSARRTGAGSAFRRRRPR
                     GNAD"
BASE COUNT          495 a          986 c          895 g          459 t
ORIGIN      
        1 gtctacctgc cggccggcac gacggccgcc gagatggcgg ccaagctgaa agccatggcc
       61 ggcatcgagg cagcgctctc caagcaggac gccgcgtccc gtttcgagct gcccgccgat
      121 cggctgggcg acctggtcgt cgtctcgacc aagcacaagg ttttaggcac atcggcggcg
      181 cggcacgatc tttccggcct gaccgagccg ctgcgcagcc acggcggcgt ttccgagcag
      241 aaagtgccgc tgctctgtaa ccgaaagctc gcggccgacg ccgcctcgcg ccattggcgc
      301 aacttcgacg ccttcgacct cgccctcaac ctcgttgcct gagagacagc catggacacc
      361 ctgagccgca ccgatgtgcg gcacgagacg ctgcgcatcg ccggcaggaa ggtcgagacc
      421 aaggcccggc tggacgtgcg cttcccgtgg gacaaccgcc tggtcggcag cgtgccgcgc
      481 gccacgcccg agctggtggc cgaagccttc aggatcgccc acacctacaa gcccaggctg
      541 acgcgctacc agcgccagca gatcctgctc aagaccgccg agcttttggc cgcccgcaag
      601 gcagagctgt cccgcctgat cacgctcgag tcgggccttt gcctgaagga ctcgctctac
      661 gaggtcggcc gcgccttcga tgtcttcacc ttcgccggcc agctttgcct gctcgatgac
      721 ggccagactt tttcctgcga cctcaccccg cacggcaagt cgcgcaagat cttcaccctg
      781 cgccagccgc tcaacgccat ctcggccatc acgccgttca accatccgct gaacatggtg
      841 gcgcataagc tggcgccggc tttcgccacc aacaactgcg tggtgctgaa gcccactgag
      901 ctgacgccgc tcaccgcctt gttcctggcc gacacgctct acgaggcggg cctgccgccc
      961 gagatgttgt cggtcatcac cggcaatccc gccgatatcg gcgacgccat gatcaccgat
     1021 ccgcacgccg atctcataac cttcaccggc tcggtccgcg tcggcaagca catcgccgcc
     1081 tcagcgggct acaagcggct ggtcctcgag ctgggcggca acgatccgct gatcgtcatg
     1141 gaagatgccg atctcgatcg cgcggccgat ctggccgtcg ccggcgcgac caagaactcc
     1201 ggccagcgct gcacggcggt caaacgcatc ctcgtgatcg acagcgtcgc cgacgccttc
     1261 atcgagcggg tgctggccaa ggcgaagaag cttaaggccg gcgatccact cgatcgcgag
     1321 accgatatcg gcacggtcat ccacgagcgc gccgctaccc tgttccagaa cagggtgagc
     1381 gaggccgtgg ccaagcacgg cgccaaatta ctgttcggca acgaccgcaa gggcgcgctc
     1441 ttcccgccga cggtggtcga ccatgtcgat cccgcctgcg aactggtgcg cgaggagacc
     1501 ttcggcccgg tgatcccgat catccgggtg aaggacatcg accacgccat caaagtgtcc
     1561 aacggcacgg cctacggcct gtcctccggc gtctgcaccg accgcctgga ttacgtcacc
     1621 cgcttcgttg acgagctgga ggtcggcacc gtcaatgtct gggaggtgcc gggctatcgc
     1681 atcgaaatgt cgcccttcgg cggcatcaag gattcgggcc tgggctacaa ggagggcgtg
     1741 ctggaggcga tgaagagctt caccaatgtg aagacgtggt cgctgccctg gccggggtag
     1801 ggcagcgtga cacttttggc ggcaatgaac gttatgtcgg ggcgttttac gatctgcagc
     1861 caaaatccag gaggacatcg tgcccgacgc tcagacctat tccggaagct gccattgcgg
     1921 cgccgtcgcc tacaccgtcg aggtcgatcc ggcgcaggcg atgaaatgca actgctcgat
     1981 ctgcaccagg ctcggcgcgg tctgggcctt cgcgcccaag accaagttca aattgacctc
     2041 cgacgaggcc gagcagggcg actaccagtt caacaagaag cgactgcacc atcgtttctg
     2101 caccgagcgc ggcattgaaa gttatgccga gggcaccggg cccgacggct cgcccacggt
     2161 cggcatcaat ctgcgttgcc tcgagggcgt cgacgtcgaa aagctgagcc cgcgcctgta
     2221 cgacgggcgg agcgcctagc gtcgttccga gccgcgttgc cggcaagccg cgcccgcaag
     2281 tcatcgagct gtttcaggct cttcaccgtc tcctccggcc gcttggcggc gacgcccaca
     2341 agcagcgctt caagcagcgc cagcgtggcc gtatgcaggc tgatacggtc ggcccctccg
     2401 cgctcgacgg caagcgagag atcgatgcgg ccggccagca cggtgccgag cgaatcgctc
     2461 agcaggatct tggccatgcc gagctggtcg gcccggtcga gcagtgcttc cagttccggc
     2521 gtcggccggg tgtaggccag aaggaccagc aggtcgccgc gccgcagccg atgcagcccg
     2581 tcggccagcg attgcccggt gtcgctcagg catccggcgg cgatgccgaa gcggttgagc
     2641 tggaaggcga agtactgggc gatggcggcc gatggcccga tgccgaacac catgacccgc
     2701 cgcgccgccg ccagccggtc gaccgctgcc ttgaacagtg ccggccggac gtcgcgccgc
     2761 agtttctcca tcgcctgctg gtgcgtggcg atcgtgaggt cgaaggccga cttcggatcg
     2821 gcgccggtat cgccc
//
LOCUS       DASWGA010000019         3127 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2153212, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000019 DASWGA010000000
VERSION     DASWGA010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3127
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2153212"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(186..1733)
                     /locus_tag="VF991_00390"
     CDS             complement(186..1733)
                     /locus_tag="VF991_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX9554916.1"
                     /translation="MRGEPDRSPAALPANRVAITISIMLATFMQGVDTTITNVALPHM
                     QGSLSASQDQIAWVVTSYIVAAAIMTPLTGWLAGRFGIKYVFLISVVGFTLASALCGA
                     ATSLAELVIFRLLQGICGAALVPLSQAVLFQINPPERHAQAMSVWGMGVILGPILGPA
                     LGGYLTDYYSWRWVFYINLPFGVLASIGILIFIHETRHGRREPFDFFGFAALSLAIGA
                     LQMLLDRGELKDWFGSIEIWIEATIAGLGLYLFIVHTVTATDRSFLNRDLLKDGNCIV
                     GTLLMFLIGIPLYGTMTLLPLMLQNLMNYPVMTTGLITAPRGIGTMVAMFLVARLVGR
                     IDTRLIILTGLLATVVSMWQMTGFSLQMGMGPIITSGVLQGFGLGFVFTPLSIVTFST
                     LPRHIMTQGTAIFSLMRNIGGSIGISIVVALLSENTQTVHSRLVEHLRPDNPLAQAPF
                     LAPPYSLSVPNGIAALNAEVTRQAQMVAYIDDFQLMMVIVLAAAPLLLLLRKPRPPRA
                     PGLAAAE"
     gene            complement(1730..2899)
                     /locus_tag="VF991_00395"
     CDS             complement(1730..2899)
                     /locus_tag="VF991_00395"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX9554917.1"
                     /translation="MTTSTDNEAPARGFRRVFGDRDAIAGWRARPLRQRLRLPLMLAG
                     PIVVLIAASWWYLTSGRYVSTDDAYIQAARTMISADISGRVVAIEVQDNQRITKGQVL
                     FKLDDRPFRIAVEEANAMLAAAKLQVEALKATYRLKVADAKAAEDTLAYHQRDFERQR
                     QLAVSGTASRQAFDLAQNGLQIAQQKVISTQSDIANTLAQLGGNPDIPVDQHPSVQRA
                     QAALDKAGLDLSYSTVRAHENGIVTKVEQLQVGSYVTASTPVFSMMSDRIWVEANFKE
                     TELTHMRPGQSATVEIDTYPGIVFSAKLVSLSPGTGLSFSLLPPENATGNWVKVVQRL
                     PVRLELESPDPNQLLHAGLSATVEVDTKHRKPWLVWLDRVTGRLFGTAQAGEQQR"
     gene            complement(2896..>3127)
                     /locus_tag="VF991_00400"
     CDS             complement(2896..>3127)
                     /locus_tag="VF991_00400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554918.1"
                     /translation="RIWNVANETRDEALALLSPDEAEILIDLLCRVHTTLSDRVPFGG
                     RPAILAQTRASAATAVPEATTAGKMPAVETAR"
BASE COUNT          562 a          984 c         1062 g          519 t
ORIGIN      
        1 ccggcgcgca gcgtataggt gcggacttcg tagatcatgg cgcatcctcc agatgacagg
       61 ggttggcgag gtgatttgcc agccgccgct tgcattccga ttttcggcag aacgagcggc
      121 gtgcgccaac catagcacaa agtgctccag ccggcgccgt cgaaagctcc aggcgccgcc
      181 ggcggctact cggcggcggc gaggccgggc gcgcgcgggg ggcgcggctt gcgcagcaac
      241 agcagcaacg gcgccgccgc cagaacgatc accatcatca gctggaaatc gtcgatatag
      301 gcgaccatct gcgcctgccg cgtcacctcg gcgttcaagg cggcgatgcc gtttggcacg
      361 ctcaggctgt agggcggcgc cagaaagggc gcctgcgcca gcgggttgtc gggccttaga
      421 tgctcgacca gccgcgaatg caccgtctgg gtattctcgg acaacagcgc cacgacgatc
      481 gagatgccga tgctgccgcc aatgttccgc atcaggctga agatcgccgt accctgcgtc
      541 atgatgtgac ggggcaaggt cgaaaaggtg acgatgctga gcggcgtgaa cacgaagccg
      601 agaccaaagc cttgcagcac ccccgaggtg atgatcgggc ccatgcccat ctgcagcgaa
      661 aagccggtca tctgccacat cgaaacgacg gtcgccagca ggccggtcag gatgatcagc
      721 ctggtgtcga tgcggccgac cagccgggcg acgaggaaca tcgccaccat cgtcccgatg
      781 ccgcgcggcg cggttatcag cccggtcgtc atcaccggat agttcatcag gttttgcagc
      841 atcaacggca ggagcgtcat cgtcccgtag agcgggatgc cgatgaggaa catcaacagc
      901 gtgccgacga tgcagttgcc gtccttcaac aggtcgcggt tcagaaacga gcggtcggtc
      961 gcagtcacgg tgtggacgat gaacaaatag aggccgagtc cggcgattgt cgcctcgatc
     1021 catatttcga tcgagccgaa ccagtccttc agctcgcccc ggtcgagcag catctgcagc
     1081 gcgccgatcg cgaggctgag cgcggcaaaa ccgaagaaat cgaacggctc gcgacggccg
     1141 tgccgggttt cgtggatgaa gatgaggata ccgatcgagg cgagcacgcc aaatggcagg
     1201 ttgatgtaga acacccagcg ccagctgtaa taatcggtca aatagccgcc gagcgccggg
     1261 ccgaggatcg ggccgaggat cacccccatg ccccataccg acatggcctg cgcatgccgc
     1321 tcgggcgggt tgatctgaaa cagcaccgcc tgcgacagcg gcaccagggc cgccccgcag
     1381 atcccttgca gcaggcgaaa gatcaccaat tcggcaaggc tcgtcgcggc gccgcacaag
     1441 gccgaggcga gggtgaagcc gacgaccgag atcaggaaca cgtatttgat gccgaaccgg
     1501 ccggcgagcc agccggtcag cggcgtcatg atcgccgcgg caacgatgta ggaggtgacg
     1561 acccaggcga tctggtcctg cgaggccgag agtgagccct gcatgtgcgg cagcgcgaca
     1621 ttggtgatgg tcgtgtcgac gccctgcatg aacgtcgcaa gcatgatcga gatcgtgatg
     1681 gcgacgcggt tggccggaag agcggcagga ctgcggtccg gctctcccct caccgctgct
     1741 gctcgcccgc ctgggcggtg ccgaacaggc gtcctgtcac gcggtcgagc cagaccagcc
     1801 acggcttgcg gtgtttggtg tcaacttcga ccgtggcgct cagcccggca tgcagcagct
     1861 gattgggatc ggggctttcg agctcgaggc gcaccggcag gcgctgcacg accttgaccc
     1921 agttgccggt ggcgttttcc ggcggcagca gcgaaaagct gagcccggtg ccggggctga
     1981 ggctgacgag tttggcgctg aacacgattc ccggataggt gtcgatctcg accgtcgccg
     2041 actggcccgg gcgcatatgg gtcagttcgg tttccttgaa gttcgcctcg acccagatgc
     2101 ggtcggacat catcgaaaac accggggtcg aggccgtgac gtaggagccg acctgaagct
     2161 gctcgacctt ggtgacgatg ccgttttcgt gggcccggac cgtgctgtag gacaggtcaa
     2221 gcccggcctt gtcgagcgcg gcctgggcgc gctgcaccga ggggtgctga tcgaccggga
     2281 tgtccgggtt gccgccgagc tgggccaggg tattggcgat gtcgctctgt gtcgagatca
     2341 ccttctgctg cgctatctgc agcccattct gcgccagatc gaaggcttgc cgcgacgcgg
     2401 tgccgctgac cgcgagttga cgttgccgct cgaagtcgcg ctggtgatag gccagcgtgt
     2461 cttccgccgc cttggcgtcg gcgaccttga ggcgataggt cgctttcaac gcctcgacct
     2521 ggagcttcgc cgcggcgagc atcgcattgg cttcctcgac ggcgatccgg aacggccggt
     2581 cgtcgagctt gaacagcacc tggcctttgg tgatccgctg attgtcctgc acctcgatcg
     2641 cgaccacccg gccggagatg tcggcgctga tcatcgtgcg cgcggcctgg atgtaggcgt
     2701 catcggtcga gacgtagcgg ccgctcgtca gataccacca ggaggcggcg atcagcacga
     2761 cgatcgggcc ggccagcatc aagggcaggc gcagccgttg gcgcagcggg cgtgcccgcc
     2821 agccggcaat cgcgtcgcga tcgccaaaga cgcggcggaa gccgcgagcc ggcgcctcgt
     2881 tgtcggtgga ggtcgtcacc ttgcggtctc caccgccggc atctttccgg cggttgtcgc
     2941 ctcgggtacc gctgtggcgg ccgatgcccg ggtctgcgca aggatcgccg gccggccgcc
     3001 gaacggcacg cggtcagaca gggtggtgtg cacccgacac agcagatcga tcaggatttc
     3061 cgcctcgtcc ggcgataaca gcgcgagcgc ttcatcgcgc gtttcgttcg ccacgttcca
     3121 gatccgg
//
LOCUS       DASWGA010000020         3212 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1267033, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000020 DASWGA010000000
VERSION     DASWGA010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3212
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1267033"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1204
                     /locus_tag="VF991_00405"
     CDS             <1..1204
                     /locus_tag="VF991_00405"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HEX9554919.1"
                     /translation="EDIQLAAARIGGAVVHTPCLRSETLSRVAKADVWIKFENLQFTA
                     SFKERGALNTLLQLTPDERKRGVIAMSAGNHAQGVAYHAGRLGIPATIVMPSFTPNTK
                     VKHTRDHGARVVLHGDTLAEAGAEAHRLAKAEKLVFVHPYDDPRIIAGQGTIALEMLQ
                     DVPELDTLVVPVGGGGMIAGCAVAARGLKPDVKVIGVESAGYSAMHQLLAGEPVTVGG
                     DTIAEGIAVRDIGTAPLAIARALVDRVLAVDEVAIEHAIALFLEVEKTVAEGAGAAGL
                     AALLAHPQHFTGRKVGLVLCGGNIDTRLLASVLLRGLVRDGRIVRLRLMIGDLPGQLA
                     RVAGLIGKAGGNIVEVQHQRLFGSVVAKATELDVTVETRDRDHVRELVAALQADGFQV
                     RVLEGADA"
     gene            1250..2863
                     /gene="purH"
                     /locus_tag="VF991_00410"
     CDS             1250..2863
                     /gene="purH"
                     /locus_tag="VF991_00410"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008936310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEX9554920.1"
                     /translation="MATAPNYVPSPTPDLARIERALISVSDKVGLVELGRALAAHDIE
                     ILSTGGSAKALRDAGLKVTEVSDHTGFPEIMDGRVKTLQPTIHGGILARRTDAGHRKA
                     MSDHKIAGIDLVVVNLYPFEATVARGADFPTSVENIDIGGPALIRASAKNHDFVTVVV
                     DPGDYPALIAELAAHKGATSLALRRKLAAKAYARTAAYDSAIASWFAKQEGETFPERL
                     TISAERVQTLRYGENPHQQAAFYSDGSKRPGIATSRMVQGKELSYNNIGDTEAAYECV
                     AEFKEPAVVVVKHANPCGVAVAKDQYSAYLKAYACDPVSIYGGIVAVNTTLDARTAED
                     LAKRFLEVVIAPDATAEALAVLARKKDVRVLLAGALPDPASAGMTLKSVAGGYLLQSR
                     DNGHVKKGDLKVVTKRAPTAKELDDLLFAFTVCKHVKSNAIVYAKDGATVGVGAGQMN
                     RRDSSRIAAIRAAEAGALAGLKESPAIGSVVASDAFFPFADGLLAAAEAGATAVIQPG
                     GSLRDKEVIEAADEKGLAMVFTGMRHFRH"
     gene            complement(2864..>3212)
                     /locus_tag="VF991_00415"
     CDS             complement(2864..>3212)
                     /locus_tag="VF991_00415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="short-chain dehydrogenase"
                     /protein_id="HEX9554921.1"
                     /translation="KVALIRFSECLAAEVKAHGVSVFAMGPGTVRTAMSEHSLNSPEG
                     KTWLPWFRDIFDEGRDLPPERPAALLLALASGRADGLSGRFVQPQDDLDRLVAAAQAI
                     EEKKLYTLQVQRL"
BASE COUNT          544 a         1125 c         1069 g          474 t
ORIGIN      
        1 ggaagacatc cagctcgccg ccgcgcgcat cggcggcgcg gtggtgcaca cgccctgcct
       61 gcgaagcgag acgctgtcgc gcgttgccaa ggcggacgtc tggatcaagt tcgagaacct
      121 gcaattcacc gcctcgttca aggagcgcgg cgcgctcaac accctgctgc agctcacgcc
      181 cgacgaacgc aagcgcggcg tgatcgccat gtcggccggc aaccatgccc agggcgtcgc
      241 ctatcacgcc ggccggctcg gcatccccgc caccatcgtc atgccctcgt tcacgcccaa
      301 caccaaggtc aagcacacgc gcgatcatgg cgcgcgcgtg gtcctgcacg gcgacaccct
      361 ggccgaagcc ggcgccgagg cgcatcggct ggccaaggcg gagaagctgg tgttcgtcca
      421 cccctatgac gatccgcgca tcatcgcggg ccagggcacg atcgcactgg aaatgctgca
      481 ggacgtgccc gagctcgaca cgctggtggt cccggtgggc ggcggcggca tgatcgccgg
      541 ctgcgccgtc gcggcgcgcg gactgaagcc cgacgtgaag gtgatcggcg tcgaatcggc
      601 cggctactcg gccatgcacc agctgctggc cggcgagccc gtgacggtgg gcggcgacac
      661 catcgccgag ggcatcgccg tgcgcgacat cggcaccgcg ccgcttgcca tcgcccgcgc
      721 cctggtcgat cgcgtgctcg cggtcgacga ggtagcgatc gagcatgcca tcgcgctttt
      781 cctcgaggtc gagaagacgg tggccgaagg cgccggcgcg gcgggtctgg cggcgctgct
      841 ggcccatccg cagcatttca ccggccgcaa ggtcgggctg gtgctgtgcg gtggcaatat
      901 cgacacccgc ctgctcgcct cggtcctgct gcgcggcctg gtgcgcgacg gccgcatcgt
      961 ccgcctgcgg ctgatgatcg gcgacctgcc cggccagctc gcccgcgtcg ccggccttat
     1021 aggcaaggcg ggcggcaaca tcgtcgaagt ccagcatcaa cgcctgttcg gcagcgtcgt
     1081 cgccaaggcg accgagctcg atgtcaccgt cgaaacccgc gatcgcgacc atgtccgcga
     1141 gctggtggcg gcgctgcagg ccgacggctt ccaggtccgg gtgctggaag gcgcggacgc
     1201 gtaaatccgc cgcttttacc catcggtggg tgggtctaaa agacccgcca tggccaccgc
     1261 cccaaactac gtaccctcgc ccacgcccga tcttgctcgc atcgaacggg cgctgatctc
     1321 cgtgtccgac aaggtaggcc tggtcgagct cggccgggcg ctggcggccc acgacataga
     1381 aatcctgtcg actggaggct cggccaaggc gttgcgcgac gccggcctaa aggtgaccga
     1441 ggtgagcgat cacaccggct ttcccgagat catggacggc cgcgtgaaga cgctgcagcc
     1501 caccatccat ggcggcatcc tggcgcggcg caccgatgcc ggccatcgca aggcgatgag
     1561 cgatcacaag atcgccggca tcgatcttgt ggtggtgaac ctctatccgt tcgaggccac
     1621 ggtggcgcgc ggcgcggact tcccgacctc ggtcgagaac atcgacatcg gcggcccggc
     1681 gttgatccgc gcctcggcca agaaccatga cttcgtgacg gtggtcgtcg atccgggcga
     1741 ctacccggcg ctgatcgccg agctggccgc ccacaagggc gccacgagtc tggcgctgcg
     1801 ccgcaagctc gccgccaagg cctatgcccg caccgccgcc tacgattcgg cgatcgcgag
     1861 ctggttcgcc aagcaggaag gcgagacctt ccccgagcgg ctgaccatct cagccgagcg
     1921 cgtgcagacc ttgcgctatg gcgagaaccc gcatcagcag gccgccttct attccgacgg
     1981 cagcaagcgg ccgggcatcg cgacgtcgcg catggtccag ggcaaggagc tttcctacaa
     2041 caacatcggc gataccgagg cggcttacga atgcgtggcc gagttcaagg agcccgccgt
     2101 tgtcgtggtg aagcacgcca atccctgcgg cgtcgcggtc gccaaggacc agtacagcgc
     2161 ctatctgaaa gcctatgcct gcgatccggt gtcgatctac ggcggcatcg ttgcggtcaa
     2221 cacaacgctc gacgccagga cggccgagga cctggcgaaa cgtttcctcg aagtcgtgat
     2281 cgcgcccgac gccacggccg aagccctggc cgtcctggca aggaagaagg acgtgcgcgt
     2341 gctgctggcc ggcgccctac ccgatccggc gagcgccggc atgaccctga agagcgtggc
     2401 cggcggctac ctgctgcaga gccgcgacaa cggccacgtg aagaagggcg acctgaaagt
     2461 cgtcaccaag cgcgcgccaa ccgccaagga gctcgacgat cttctattcg ccttcaccgt
     2521 gtgcaagcac gtgaagtcga acgccatcgt ctatgccaag gacggcgcca cggtgggcgt
     2581 gggcgcgggc cagatgaacc gccgcgattc ctcgcgcatc gccgccatcc gcgccgccga
     2641 agcgggcgcg ctggcggggc tgaaggaaag cccggcaatc ggcagcgtcg tggcctcgga
     2701 cgccttcttt cccttcgccg acggcctttt ggccgcggcc gaagccggcg ccaccgccgt
     2761 cattcagccc ggcggctcgc tgcgcgacaa ggaagtgatc gaggcggccg acgagaaggg
     2821 cctggcgatg gtcttcactg gcatgcgcca cttccggcac tgatcaaagc cgctggacct
     2881 gcagcgtata gagttttttc tcctcgatcg cttgcgccgc ggcgaccagc cgatcgagat
     2941 cgtcctgcgg ctgcacgaag cgtcccgaca agccatccgc ccggcccgag gcgagtgcca
     3001 gcagcagcgc ggccgggcgc tccggcggca ggtcgcggcc ctcgtcgaag atgtcgcgaa
     3061 accaaggcag ccacgtcttc ccttcaggcg agttcagcga atgctcgctc atcgccgtgc
     3121 gcacggtgcc ggggcccatg gcgaagaccg agacgccatg cgccttcacc tcggcggcca
     3181 ggcactcgga gaagcgaatg agggcgacct tg
//
LOCUS       DASWGA010000021         2599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_887837, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000021 DASWGA010000000
VERSION     DASWGA010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_887837"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VF991_00420"
     CDS             complement(<1..914)
                     /locus_tag="VF991_00420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9554922.1"
                     /translation="MTRDWVPLLLIPVVAALALPLVGSPTSWVTLTVAGLAMGLMIFI
                     MASGLTLTFGLMDVLNFGHGAFIAVGAFVAASVMLALAPWMTADSLWLNLGAMAPAVL
                     AAMAVSGALGWGFERVIVRPVYGQHLRQILVTTGGLIVAEQLLKVVWGPDQITLARPT
                     ALRGAFLLGDVAIEKYRVLAVLIGLAVFAALALTLNRTRLGLLIRAGVENGEMVEALG
                     YRIRRLFIGVFVAGSALAGLGGAMWGLYQETVTAAIGAQVAVLVFIVVIIGGLGSVGG
                     CFVGALLVGLTANYIGFLAPKVALGSNIL"
     gene            complement(925..1650)
                     /locus_tag="VF991_00425"
     CDS             complement(925..1650)
                     /locus_tag="VF991_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9554923.1"
                     /translation="MPEALLSLRGVRTNIGRYHILHGVEFDVPEGGLTMLLGRNGAGK
                     TTTLRTIMGLWRAAAGEIRYAGRDITGLPTPDIARLGIAYVPESMAIFADLTVQENLV
                     LAARSGPPDRQRLDWIFGRFEALKRFWTLPAGHLSGGQKQMLAVARAIVEPRRLLLID
                     EPTKGLAPAIIANMIDAFRELKDGATSLLVVEQNFAFARQLGDSVAVMDDGKVAHSGG
                     MAAFAADTGLQQHLLGLGMGEHQ"
     gene            complement(1643..2392)
                     /locus_tag="VF991_00430"
     CDS             complement(1643..2392)
                     /locus_tag="VF991_00430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9554924.1"
                     /translation="MLATEDLTIRFGGHAAVEGVSCAFQPGTLTAIVGPNGAGKTTYF
                     NLISGQLPATSGKVTLNGQDITAVAAPRRSRLGLGRAFQLTNLFPNLTALENVRLAVQ
                     VKSGKGLDLFSRALGHRELIDRAMAHLSAVSLAGRAQAIAATLPHGDQHKLEVAILLA
                     LEPDIFMFDEPTAGMSIDEVPTVLDIIAAIKARGDKTILLVEHKMDVVRALSDRIVVL
                     HQGKLVADGKPADVINSDIVREAYLGGAADA"
BASE COUNT          430 a          902 c          877 g          390 t
ORIGIN      
        1 aggatgttcg agcccagcgc caccttgggc gccaggaagc cgatatagtt ggccgtcagc
       61 ccgaccagca gggcgccgac gaagcagccg ccgaccgatc caaggccgcc aatgatgacg
      121 acgatgaaga ccagcaccgc cacctgcgcg ccgatcgccg ccgtcaccgt ctcctggtag
      181 aggccccaca tggcgccgcc caggccggcc agggcggagc cggcgacgaa cacgccgatg
      241 aacagacggc ggatgcggta gcccagcgcc tcgaccatct cgccattctc cacgccggcg
      301 cgaatcagga gtccaaggcg cgtgcggttg agagtcagcg cgagtgcggc gaacacggca
      361 aggccgatca gcaccgccag cacgcggtac ttctcgatcg ccacgtcgcc cagcaggaat
      421 gcgccgcgca gcgcggtcgg ccgcgccagc gtgatctggt ccggtcccca cacgaccttg
      481 aggagctgct cggccacgat caagccgccg gtcgtcacca ggatctggcg caaatgctgg
      541 ccgtagaccg gccgcacgat cacccgctcg aagccccagc cgagcgcgcc gctcaccgcc
      601 atcgccgcca gcaccgccgg cgccatggcg ccaagattga gccacagcga atcggccgtc
      661 atccagggcg ccagcgccag catgacgctg gccgccacga aggcgccgac ggcgatgaag
      721 gcgccatggc cgaaattgag cacgtccatc aggccgaagg tcagcgtcag ccccgacgcc
      781 atgatgaaaa tcatcaagcc catggcgagg ccggccacgg tgagcgtaac ccagctcgtc
      841 ggcgagccga ccagcggcag cgcaagcgca gccaccaccg ggatcagcag cagcggaacc
      901 cagtcacgcg tcatggcgcc cgcttcattg atgttctccc atgccgaggc caagcaggtg
      961 ctgctgcagg cctgtgtcgg cggcgaaggc cgccatgccg ccgctatgcg ccaccttgcc
     1021 gtcgtccatg acggcgacgc tgtcgccgag ctggcgggca aaggcgaaat tctgctcgac
     1081 caccagcagg ctcgtcgcgc cgtccttcag ctcgcgaaag gcgtcgatca tgttggcgat
     1141 gatggcgggc gccaggccct tggtcggttc gtcgatcagc agcagccggc gcggctcgac
     1201 gatggcgcgg gcgacggcca gcatctgctt ctggccgccc gacaggtgcc ccgccggcag
     1261 ggtccagaag cgtttcaggg cctcgaagcg gccgaagatc cagtcgaggc gttggcgatc
     1321 gggcggcccc gaccgcgccg ccagcacgag gttctcctgc accgtgaggt cggcgaagat
     1381 cgccatgctt tcgggcacgt aggcgatgcc gagccgggcg atgtcgggcg tcggcagtcc
     1441 cgtgatgtcg cggccggcgt agcggatctc gcccgccgcg gcgcgccaca gtcccatgat
     1501 ggtgcgcagc gtcgtggtct tgcccgcgcc gttcctgccc agcagcatgg tgagcccgcc
     1561 ctccggcacg tcgaactcga cgccgtgcag gatgtggtag cggccgatat tggtccgcac
     1621 gccgcgcagg ctgagcagcg cttcaggcat ccgcggctcc gcccaggtac gcctcgcgca
     1681 cgatgtccga gttgatcacg tcggccggct tgccgtcggc caccaacttg ccctggtgca
     1741 gcacgacgat gcgatccgac agcgcgcgca ccacgtccat cttgtgctcg accagcagga
     1801 tggtcttgtc gccgcgcgcc ttgatggcgg cgatgatgtc gagcacggtc ggcacctcgt
     1861 cgatgctcat gccggcggtc ggctcgtcga acatgaagat gtcgggctcg agcgccagca
     1921 ggatcgccac ctcgagcttg tgctggtcgc catgcggcag ggtcgcggcg atcgcctggg
     1981 cgcgcccggc cagcgacacc gccgaaagat gcgccatcgc ccgatcgatc agctcgcggt
     2041 ggccgagcgc gcgcgagaaa agatcgagtc ccttgccgct tttcacctgc acggccagcc
     2101 gtacgttttc cagcgccgtc aggttgggaa agaggttggt gagctggaag gcgcggccga
     2161 ggcccagccg gctgcgccgt ggcgcggcga cggcggtgat gtcctggccg ttcagcgtca
     2221 ccttgccgga ggtggcggga agctggcccg agatcaggtt gaagtaggtc gtcttgccgg
     2281 cgccgttcgg cccgacgatg gcggtgagcg tgcccggttg aaaggcacag ctcaccccct
     2341 cgacggcggc gtgtccgccg aagcggatcg tcaagtcttc ggtggcgagc attatgtcat
     2401 gctcttctgg accgcgcgcg tctcgcgcgc ctcatgagcg cgcgggacgc gcgcggtccg
     2461 gaagacgtct cagcgaactc accgcttgtt cttgatcggc agcttgagct cgttcgccgg
     2521 gatctcgcgc accagctcga gcaggtctgt attgtccggc gggttctgct tcatgcgcca
     2581 gtgatacatt acctgcagc
//
LOCUS       DASWGA010000022         2915 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2279764, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000022 DASWGA010000000
VERSION     DASWGA010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2915
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2279764"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            269..754
                     /locus_tag="VF991_00435"
     CDS             269..754
                     /locus_tag="VF991_00435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9554925.1"
                     /translation="MTISVGMTVNGKSVSGKVEARTLLVQFLREHLGMTGTHVGCDTS
                     QCGACVVHVDGKSVKSCTLLAVQAEGAKVLTIEGLAESADKLHPMQEAFRENHALQCG
                     FCTPGMVMSAIDMVKRYNYQLDEATVRRELEGNLCRCTGYHNIVKAILAAAPAMKSAG
                     V"
     gene            758..>2915
                     /locus_tag="VF991_00440"
     CDS             758..>2915
                     /locus_tag="VF991_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9554926.1"
                     /translation="MTAATGIGARVLRTEDKRFLTGTGRYVDDLPLARATYAYFLRSP
                     HAHAKIKSIDTAVAKKMPGVVEIFTGKDTANAKVGGLICGWVVKGKDGQPHKSPPHPV
                     MALDTVRYVGDTVAMVVANTADEAKDAAEAIKVDYDVQPANVDLAHALDKGVPEVHPE
                     APGNLIYDWEIGVKADIDAAFAKAAHVTKLDLVNNRLIPNAMEPRAAAADYDKGTGNY
                     TLWSTSQNPHVLRLILSAFVLGIPEHKLRVVAPDVGGGFGSKIFCYNEETMVTWAASR
                     VGRPIKWTAERSESFMTDAHGRDHVTRAELALDKDGKFLALRVDTIANMGAYLSTFST
                     AVPTYLYATLLAGQYTTPLIYANVRAALTHTAPVDAYRGAGRPEATFVIESIVSKAAA
                     EMKIDPAELRRKNFIPTSAFPYQTPVALQYDSGNYPPIIDEAMKIADYKGFEARRAEA
                     KSRGKLRGIGFSSYIEACGLGPSRVIGQLGGGVGQWESAQIKFNPTGNVQILTGAHSH
                     GQSHETTFAQIVSDKLGVPIESIEVVHGDTATTPFGMGSYGSRSLAVGGSAIMKAADK
                     IIAKGKKIAAHLMEASVADVVFEQGTFKVAGTDKAVPLGAAVFAAYVPHNYPLEELEP
                     GMDENAFYDPSNFVYPAGTQICEVEIDPDTGTVEVVAHTAVDDFGNIINPMIVDGQVH
                     GGIVQGVGQALMENIAYDASGQLVSGSFMDYAMPRAD"
BASE COUNT          544 a          983 c          941 g          447 t
ORIGIN      
        1 cggcgccgac gccgatgacg agccagtgcc tgtaaccccg ccgcgccgca gcggacggcg
       61 gcggggttac aggcactggc tcgtcatcgg cgtcggcgcc gttgtgctga tcctgatctt
      121 cctggcgagc cgctagcctc cgccagccgg ttgttgcccg caattcgctt gaccggcgcc
      181 tgagcggctt gcgagagtcg ctccaacgcc cggcgggtgc gcgtcgacgc gcccgcgtcg
      241 aaccaacaat ctcgagggag aagacgacat gacaatttcc gtcggcatga ccgtcaacgg
      301 caagtccgtc tcgggcaagg tcgaggcgcg gacgctgttg gttcagttcc tgcgcgagca
      361 cctcggcatg accggcaccc atgtcggttg cgacaccagc cagtgcggcg cctgtgtcgt
      421 ccatgtcgac ggcaaatcgg tgaagtcctg caccctgctg gcggtccagg ccgaaggcgc
      481 gaaggtgctc acgatcgagg gcctggcgga aagcgccgac aagctgcacc cgatgcagga
      541 ggcgttccgc gagaaccacg ccctgcaatg cggcttctgt acgcccggca tggtgatgag
      601 cgccatcgac atggtgaagc gctacaacta ccagctcgac gaagcgacgg tgcggcgcga
      661 gctcgagggc aatctctgcc gctgcaccgg ctaccacaac atcgtgaagg caatcctggc
      721 ggcagcgccc gccatgaagt cagcaggggt gtaagccatg accgccgcca ccggaatcgg
      781 cgcccgcgtt cttcggacgg aagacaagcg cttcctgacc gggaccggcc gctatgtcga
      841 cgatctgcct ctcgcgcgcg cgacctacgc ctatttcctg cgttcgccgc acgcccacgc
      901 caagatcaag agcatcgaca ccgcggtggc caagaagatg ccgggcgtcg tcgagatctt
      961 taccggcaag gatacggcca atgccaaggt cggcggcctg atctgcggat gggtggtcaa
     1021 gggcaaggac ggccagccgc acaaatcgcc gccgcatccg gtaatggcgc tcgataccgt
     1081 gcgctatgtc ggcgacaccg tcgccatggt cgtggccaac actgccgatg aggccaagga
     1141 cgcggccgag gcgatcaagg tcgactacga cgtccagccg gccaacgtcg atcttgcaca
     1201 tgcgctcgac aagggcgtgc ccgaagtgca tcccgaggcg ccgggcaacc tgatctacga
     1261 ctgggaaatc ggcgtgaagg ccgatatcga cgccgccttc gccaaggccg cgcacgttac
     1321 caagctcgac ctcgtgaaca accggctgat ccccaacgcc atggagccgc gcgccgcggc
     1381 ggcggactac gacaagggca cgggcaacta cacgctatgg tcgacgtcgc agaacccgca
     1441 tgtgctgcgc ctcatcctgt cggccttcgt gctgggcatt cccgagcaca aactgcgcgt
     1501 cgtcgccccg gacgtcggcg gcggcttcgg cagcaagatc ttctgctaca acgaagagac
     1561 gatggtcacc tgggcggcca gccgtgtcgg ccggccgatc aagtggacgg ccgagcgttc
     1621 cgaatcgttc atgaccgacg cccatggccg cgaccatgtc acccgtgccg agcttgccct
     1681 cgacaaggac ggcaagttcc tcgcgcttag ggtcgacacc attgccaaca tgggcgcgta
     1741 tctgtcgacc ttctcgacgg cggtgccgac gtatctttac gccacgctgc tggccggcca
     1801 gtacacgaca ccgctcatct acgccaacgt gagagcagcg cttacgcaca ccgcgccggt
     1861 cgacgcctac cgcggcgccg gacggcccga ggcgacgttc gtgatcgaga gcatcgtgag
     1921 caaggcggcg gccgagatga agatcgatcc ggcggagctg cgccgcaaga acttcattcc
     1981 gacgtccgcc ttcccgtacc agacgccggt ggcgctgcag tacgattcgg gcaactaccc
     2041 gccgatcatc gacgaggcga tgaagatcgc cgactacaag ggcttcgagg cccgccgcgc
     2101 cgaggccaag tcgcgcggca agctgcgcgg catcggcttc tcgtcctaca tcgaggcctg
     2161 cggcctggga ccgtcgcggg tcatcggcca gctgggtggc ggcgtcggcc aatgggagtc
     2221 ggcacagatc aagttcaacc cgacgggcaa cgtccagatc ctgaccggcg cgcacagcca
     2281 cggccagagc cacgagacga ccttcgccca gatcgtgtcg gacaagctcg gcgtgccgat
     2341 cgagagcatc gaggtcgttc acggcgatac cgcgaccacg ccgttcggca tgggcagcta
     2401 cggcagccgg tcgctggcgg tcggcggttc ggccatcatg aaggcggccg acaagatcat
     2461 cgccaagggc aagaagatcg cggcccatct catggaggcg tcggtcgccg acgtcgtctt
     2521 cgagcaaggc accttcaagg tcgccggcac cgacaaggcc gtgccgctcg gggccgcggt
     2581 gttcgcggct tacgtgccgc acaactaccc gctggaagag ctcgaacccg gcatggacga
     2641 gaacgccttc tacgatccgt cgaacttcgt ctatccggcg ggcacgcaga tctgcgaggt
     2701 cgagatcgac cccgacaccg gcacggtcga ggtggtcgcc cacaccgcgg tcgacgattt
     2761 cggcaacatc atcaatccga tgatcgtcga cggccaggtc catggcggca tcgtccaggg
     2821 cgtcggccag gcgctgatgg aaaacatcgc ttatgacgcc tccggccagc tggtgtcggg
     2881 ctcgttcatg gactatgcca tgccgcgcgc ggacg
//
LOCUS       DASWGA010000023         2772 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1267446, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000023 DASWGA010000000
VERSION     DASWGA010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1267446"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            285..1037
                     /locus_tag="VF991_00445"
     CDS             285..1037
                     /locus_tag="VF991_00445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554927.1"
                     /translation="MANGDTRGSHNGLLYGIIGALCVVLVGGGIYIFKAQDKPVEPAV
                     QAAKPAPPPLPPPPAATPRPSPPPAPAPPAGPSAAQIGQARTLIADARRFASLGDFSG
                     AETALQNADRAAPGFAEVAQARRDIAEMRTAGGQLRPLIERTRRAIERGDFAAAERTL
                     GEAERIDANAPEVIEVRRELRAAERQGNRQQDGRVTILLTAARAAIAVGDLAAADRAL
                     GQAEQVDPRDPAVIQARADFYAAERTARPRRN"
     gene            1114..2508
                     /locus_tag="VF991_00450"
     CDS             1114..2508
                     /locus_tag="VF991_00450"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9554928.1"
                     /translation="MTKSGAVDALPFASALSDIVWPAAVSPRGMATLSLLFQLEQTQW
                     WPADRLRDRQQAQLQRLLRHAAVHVPFYRGRLGTLADADGETFWKMWRATPLLERQNV
                     QEAGEALLSREIPDGHGELSEIFTSGSTGRPIRAVRTELWQLMWSAVTVREHLWHGRD
                     LSRKLAAIRDSTAGKAPYPEGERFEHWGFSTGDIFKTGPCVSLNITTPVDDQLQWLRR
                     EAPDYLLTHPTMLDRLVRRSAEIGFRPDRLRQVLTISEILAPGLREFCRQHWGVPIVD
                     TYSTREAGYLALQCPHTEHYHLQSETVLVEVLDSAGQACRPGEIGRVIATPLHNLAMP
                     LLRYDVGDYAEVGEACTCGRGLPVIRRILGRRQNMLRAADGGERWPLLSSGDIGKLLA
                     LAPIRQYQFAQTHRDRIEVRLQTARPLSDDEARGVVDWAQAKFGNAFRIELAFPAELP
                     RTASGKFEDFISLL"
     gene            complement(2509..>2772)
                     /locus_tag="VF991_00455"
     CDS             complement(2509..>2772)
                     /locus_tag="VF991_00455"
                     /inference="COORDINATES: protein motif:HMM:NF018829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlrC C-terminal domain-containing protein"
                     /protein_id="HEX9554929.1"
                     /translation="EGVTVIVNTKRSQCHSLDCFTKLGVDPSTKKVVVVKSMQHFHAA
                     YAPIASEVVYVAAPGALVPDWSLLPYTKVDKAQWPFVADPHTT"
BASE COUNT          465 a          942 c          890 g          475 t
ORIGIN      
        1 actgcatagt agggcaccac aaactgccgg ccgtgtctgc cttcaccgcc ttcaccgcct
       61 tcggcggcgg cggcgagcgt ggcggcggcg ccgatgacgc cgacgagcaa cccggccttc
      121 ttggctatca tcatgggact ccctggttcg ctttagcttg taacgccggc gatgcgtgct
      181 gcgttccgtt caaatcacca aaaattgcag tcaggatgcg ccgccgttgg gaacgaattc
      241 cacggctctg cgttattccc ctgcaatttt catgggtgga catcgtggcc aacggcgata
      301 cgagaggcag tcacaacggt ctgctctacg ggatcatcgg cgcgctatgc gtcgtgctcg
      361 tcggcggcgg catctacata ttcaaagccc aggacaagcc ggtcgaaccg gccgttcagg
      421 ccgcgaaacc cgccccgccg cccctccctc cgcccccggc ggcgacgcct cggccatcac
      481 cgcccccagc gccggcaccg ccggcaggac cctcggccgc ccagatcggc caggcgagaa
      541 ccctgatcgc cgacgcccgg cgcttcgcat cccttggcga cttctcgggt gccgagacgg
      601 ccttgcagaa cgccgacagg gcagcgcccg gcttcgccga ggttgcccaa gcccgacggg
      661 acattgccga gatgcgcacc gcgggtggcc aactccgacc gttgattgaa aggacgcgcc
      721 gcgccatcga gcgtggcgac tttgccgccg ccgagcggac gctcggtgag gccgaacgga
      781 tcgatgccaa tgcgcctgag gtcatcgaag tccgccggga attgcgggcg gccgagcgac
      841 agggcaacag gcagcaggac ggcagggtga cgatccttct caccgcggcg cgtgcggcga
      901 ttgcggtcgg tgacctcgca gcagcggacc gagcgctcgg ccaggccgag caggtcgatc
      961 cccgagatcc agccgtcatt caggcccgtg ccgatttcta tgccgctgag cgaactgcgc
     1021 ggccacggcg aaactagagc agtcgccgag tcatgaaggt ctggtagaga gccaacccct
     1081 tacgcggcca caatccgctg catgctgtct ggtatgacca agtccggcgc ggtcgatgca
     1141 ctgccgtttg caagtgccct ttccgacatc gtctggccag ccgcggtgtc gcctcgcggc
     1201 atggctacgc tctccctgct gttccagctt gaacagacgc aatggtggcc cgccgaccgc
     1261 ttgcgggatc gccagcaagc gcagttgcaa cgcctgcttc ggcatgcggc cgtgcacgtg
     1321 ccgttctacc gcggccgcct tgggacattg gccgatgccg atggcgagac gttttggaag
     1381 atgtggcgtg caacgccgct tctcgagcgt cagaacgtcc aggaggcggg cgaagctctg
     1441 ctcagccgcg agatccccga cggacatggc gagctgtcgg agattttcac gtcgggctcg
     1501 accggcaggc cgatacgcgc ggtgcgcacc gaactgtggc agctgatgtg gagcgcggtg
     1561 accgtgcgcg agcatctctg gcatggccgt gatctgtcgc gcaaactcgc cgccatccgc
     1621 gattcgaccg cgggcaaagc gccctatccc gaaggcgagc gcttcgaaca ctggggtttc
     1681 tcgaccggag acatcttcaa gaccggccct tgcgtcagcc tcaacatcac gacaccggtc
     1741 gacgaccagc tccaatggct gcgccgcgag gcgcccgact atctgctgac gcatccaacg
     1801 atgctcgatc gtctcgttcg acgaagcgcc gagatcggct tccggccgga ccgtctcagg
     1861 caggtgctca ccatctcgga gatcctggcg cctggcttgc gcgagttttg ccgccagcac
     1921 tggggcgtgc cgatcgtcga cacctacagc acccgcgagg cgggttacct cgcgctgcag
     1981 tgtccgcaca ccgagcacta tcacctgcag tccgagaccg tgttggtcga agtcctggat
     2041 tcggcgggcc aagcctgccg ccccggcgag atcgggcgcg tgatcgcgac gccgctgcac
     2101 aatcttgcga tgccgctgct tcgttacgat gtcggcgact acgccgaggt cggcgaagcc
     2161 tgcacgtgcg gccgcggact gcccgtcatc cgccgcatcc tgggtcggcg ccaaaacatg
     2221 ctgcgcgctg ccgacggcgg cgagcgttgg ccgctgctgt cgtcgggcga tatcggcaag
     2281 ctcctggcgc tggcgccgat ccggcaatac caattcgcac agacccaccg cgatcgcatc
     2341 gaggtgcgtt tgcagaccgc gcgaccgctc agcgacgacg aggcgcgggg cgtcgtcgac
     2401 tgggctcagg ctaaattcgg caacgctttc cggatcgaac tcgcttttcc cgcggagctg
     2461 ccgcgcacgg cgtcgggcaa attcgaggat ttcatatcct tgctgtgatc acgtggtgtg
     2521 cgggtcggca acgaacggcc actgcgcctt gtcgaccttg gtgtagggca gcagcgacca
     2581 gtccggcacc agcgcgcccg gcgcggcgac atagaccacc tcgctggcga tcggcgcgta
     2641 ggccgcgtgg aaatgctgca tcgatttcac caccaccact ttcttggtcg agggatcgac
     2701 gccgagcttg gtgaagcagt cgaggctgtg gcactggctg cgcttagtgt tgacgatcac
     2761 cgtcacgccc tc
//
LOCUS       DASWGA010000024         2679 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1142382, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000024 DASWGA010000000
VERSION     DASWGA010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2679
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1142382"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VF991_00460"
     CDS             <1..205
                     /locus_tag="VF991_00460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEX9554930.1"
                     /translation="TAEKFHDETMPKEAHKTAHFCSMCGPKFCSMRITQDIREYAKKG
                     MDEMSAKFRAGGNALYVPDKAAD"
     gene            711..2006
                     /locus_tag="VF991_00465"
     CDS             711..2006
                     /locus_tag="VF991_00465"
                     /inference="COORDINATES: protein motif:HMM:NF008589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MdtA/MuxA family multidrug efflux RND
                     transporter periplasmic adaptor subunit"
                     /protein_id="HEX9554931.1"
                     /translation="MKRLRTLLGIGLGLAVVAGAGWYISQSGTNPPARQGGRFAAGAA
                     TPVGIATAAKGEIPVVIRALGTVTPLNTVNVKTQITGQLIKVEFKEGQMVKQGDLLAV
                     VDPRPYDVALQQAIGQQQKDEALLKNAQVDLERYKKLVDQQSIARQQYDTQISLVRQY
                     EAALVIDQAQVDAAKLNVTYTKILAPLTGRIGLRLVDPGNYVTMADATSLCIIIQVQP
                     ISVLFTIPEDALPPVRQRLKGGASLEARVLDRAQKSELAVGKLDTHDNVIDTTTGTVK
                     LRAVFDNKDESLFPNQFVNVRLLVDTVKDAVVVPVAAIQRGQPGTFVYLVKADDTVEI
                     RVVELGATDGEKVQITSGLQVGDQVIIDGTDRLRDGAKIRRPGANPRATSGPPVAAAP
                     PDGQAAPAGAQAAPQRRRPANGEGNASGGGANRPAQTNQ"
     gene            2020..>2679
                     /locus_tag="VF991_00470"
     CDS             2020..>2679
                     /locus_tag="VF991_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9554932.1"
                     /translation="MNPSRIFIERPVGTSLLMVAIILVGMIAYKFLPLSALPQVDYPT
                     IRVQTLYPGASPEVMTSSVTAPLERQFGQMPGLNQMTSTSSAGASAITLQFDLKLGLD
                     VAEQQVQAAINAAGNLLPADLPSPPVYAEINPADAPVLTLAITSKSEPLTKVHDMVDT
                     RLAQKISQLPGVGLVSISGGQKPAVRVQANPTALAAYGLGLEDLRTAIAQANVNQAKG
                     NF"
BASE COUNT          512 a          927 c          834 g          406 t
ORIGIN      
        1 gacggccgag aagttccacg acgagacgat gcccaaggag gcgcacaaga cggcgcattt
       61 ctgctcgatg tgcgggccga aattctgctc catgcgcatc acccaggaca ttcgcgagta
      121 cgccaagaag ggcatggacg agatgagcgc caagttccgc gccggcggca acgcgctcta
      181 cgtgcccgac aaggccgcgg attgaccgcg gccgaggcgg ctgactgacc gggcccgggc
      241 ggcggctgga aaccgccgcc ccggctttgg cgccctttaa gcgtctccga aatagccatc
      301 acccccctct atggtgcgca cttattccgg gtcaccgcgg cccaagccgg tatcttaaaa
      361 aatactagta ttttccttgt ctaatactta cgtttcgtct acacttcgtt tgcgagcgac
      421 accgatggca ggacggagag ctttgtcgtg ccgcttgaaa ggagattcgg ggtcaaatgc
      481 actccactgg accgaccaaa agcgttagcg gaaattgcgg gaaatgcgga aattcgaaaa
      541 cgaccggcgg aaacggcgca aacctcaatt cgcctcgacc cctggcgttt cggaatctgc
      601 tccaagtggt aaaaggcaac gccttgcgcc ggtccgaccg ctgggggaga ctccctcgct
      661 tcggcccgta tgagtagggt aacgggcttc actttggggc gtatcggacg atgaaaaggc
      721 tgcgcaccct gcttgggatc gggctggggc ttgctgtcgt ggctggcgcc ggttggtata
      781 tttcgcagtc cggaactaat ccgccggccc gccaaggggg tcgttttgcc gccggggcgg
      841 ccacgccggt cggcatcgcc accgccgcca agggtgaaat tcccgtcgtc atccgcgccc
      901 tgggcacggt gaccccgctc aacaccgtca acgtgaagac ccagatcacc ggccagctca
      961 tcaaggtcga gttcaaggaa ggccagatgg tcaagcaggg cgaccttttg gcggtggtcg
     1021 atccgcggcc gtacgacgtc gcgctccagc aggcgatcgg ccagcagcag aaggacgagg
     1081 cgttgctcaa gaacgcccag gtcgacctcg agcgctacaa gaagctggtc gaccagcaat
     1141 cgatcgcccg ccagcagtac gacacgcaga tctcgctggt ccgccagtat gaagcggcat
     1201 tggtgatcga ccaggcccag gtcgacgccg ccaagctcaa cgtcacctac accaagatcc
     1261 tggcgccgct caccggccgc atcggcctgc gcctggtcga cccgggcaac tacgtgacga
     1321 tggccgacgc caccagcctc tgcatcatca tccaggtgca gccgatctcg gtgctcttca
     1381 ccattcccga ggatgccctg ccgccggtgc gacagcgcct gaagggcggc gcgtcgctcg
     1441 aggcgcgggt gctcgaccgg gcgcagaaga gcgagctcgc cgtcggcaag ctcgacacgc
     1501 acgacaacgt catcgacacc actaccggca cggtcaagct gcgcgccgtc ttcgacaaca
     1561 aggacgagag cctgttcccc aaccagttcg tcaacgtccg cctgctggtc gacacggtga
     1621 aggacgccgt ggtggttccc gtcgccgcca tccagcgcgg ccagcccggc accttcgtct
     1681 atctcgtcaa ggccgacgac acggtcgaaa tccgtgtcgt cgagctgggc gcgaccgacg
     1741 gcgagaaggt gcagatcacc agcggcctgc aggtcggcga ccaggtcatc atcgacggta
     1801 cggaccgcct gcgcgacggc gccaagatcc gccggccggg cgccaacccg cgcgcgacat
     1861 ccggcccgcc ggtcgccgcg gcgccgcctg acgggcaggc cgcaccggca ggcgcccaag
     1921 ccgcgccaca acggcggcgc ccggccaacg gggagggcaa cgccagcggc ggcggcgcca
     1981 accggcccgc gcaaaccaac cagtaacccc gaccgcgaca tgaacccgtc gcggatcttc
     2041 atcgagcggc cggtcggaac ttcgctgctc atggtggcga tcatcctggt cggcatgatc
     2101 gcctataaat tcctgccgct gtcggccctg ccgcaggtcg attacccgac catccgcgtg
     2161 cagacgctct atcccggcgc cagccccgag gtcatgacct cgtcggtcac ggcgccgctc
     2221 gagcgccagt tcggccagat gcccggcctc aaccagatga cgtcgaccag ctcggccggc
     2281 gcatcggcga tcacgctgca gttcgacctc aagctcggcc tcgacgtggc cgaacagcag
     2341 gtgcaggcgg ccatcaacgc cgccggcaac ctgctgccgg ccgatctgcc ctcgccgccg
     2401 gtctacgccg agatcaatcc cgccgacgcg ccggtgctga cgctcgccat cacgtcgaaa
     2461 tccgagccgc tcaccaaggt gcacgacatg gtcgacacca ggctcgccca gaagatctcc
     2521 cagcttcccg gcgtcggcct ggtcagcatc agcggcggac aaaagcccgc cgtgcgggtg
     2581 caagccaatc cgacggcgtt ggcggcgtac gggctcgggt tggaagatct gcgcaccgcc
     2641 atcgcgcagg cgaacgtcaa tcaagcgaag gggaacttc
//
LOCUS       DASWGA010000025         3737 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_130041, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000025 DASWGA010000000
VERSION     DASWGA010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3737
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130041"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="VF991_00475"
     CDS             <1..194
                     /locus_tag="VF991_00475"
                     /inference="COORDINATES: protein motif:HMM:TIGR00026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="nitroreductase/quinone reductase family protein"
                     /protein_id="HEX9554933.1"
                     /translation="ILANPEVEIQVGTNKMPARARTATGEERARLWKQAVVFWPPYAD
                     YQVKAGAREIPVVVLDPVK"
     gene            complement(314..1183)
                     /locus_tag="VF991_00480"
     CDS             complement(314..1183)
                     /locus_tag="VF991_00480"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX9554934.1"
                     /translation="MKIGVFATFMSPLATPQMIRDFGRRAEGMGLESIWMGEHVALFD
                     KNTFGYPGSKDGRIPVPEGGGMLDVTATFGFLAAATSKVRLGTGVALVPQRNPIYTAK
                     EMCTLDWLSDGRIDFGIGVGWNKEEVEACGYRWEDRGARCDEFLEVMRRLWTEPVVDF
                     DGKWVKFATMRLDPKPIQKPHVPIIVGGYADAAFRRAVRFGAGWYGFNLDPARAKAML
                     DRLDAAFAKAGRKRDAAFEIIITPPLAMAADDTKKYAELGVHRLVVNLGSQRPEKVDQ
                     RAVEIEKLVKLAA"
     gene            1242..>3737
                     /gene="ppc"
                     /locus_tag="VF991_00485"
     CDS             1242..>3737
                     /gene="ppc"
                     /locus_tag="VF991_00485"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEX9554935.1"
                     /translation="MDRPNHAETPEKDLPLRYDIRLLGRILGDTVRAQEGEPVFELVE
                     RIRRTGVQFHRDADETARQELQAIMSSLPTDRAIRIIRAFGYFSHLANIAEDQHHIRR
                     TRAYAMTQAPPRPGTMAYALGRARSAGISRTQLQAFFAQALCSPVLTAHPTEIRRKSS
                     IDREMEIARLLDERDRVEFTPEELAANRRALRRAVLSLWQTNILRDSRLRVIDEVANG
                     LAYYDYTFLRALPILYADLEDRLGAVDPAWEDLEVPSFLRMGSWIGGDRDGNPYVTAD
                     VTRQALAMQSQRAMRFYLDELHLLGGELSLDDRIVQVSDGLLALADRSPDRATERQHE
                     PYRRAIVGIYARLAATAWSLDKLEAPLPPVGEAPPYEAVEGLMADLDTVYESLVENGS
                     AGLARGRLRSLRRAIDVFGFHLASLDLRQNSDVHERVMAELVEVASVEGSTGADYRTL
                     AEPARVALLAGELGNTRPLASPHLSYGEETAGELAMLNVTADAHRRYGRAAVPNYVIS
                     KADSVSDILEVAVLLKEVGLLRPREGRLDVDIVPLFETIGDLQHCGPIMDELLALPAY
                     RRLLASRGGTQEVMLGYSDSNKDGGYLTSTWELYKAELALIDIFKRHQVGLRLFHGRG
                     GSVGRGGGPSYEAILAQPPGAVQGQIRVTEQGEVIAGKYSNAEVGRRNLETLAAATLE
                     ATLLEADRPAPPADYLSVMEELSAHAFRAYRDLVYETEGFDRYFRESTVLDEIATLNI
                     GSRPASRSDKRRIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVKAWTAARPGDGLARLQ
                     AMHDDWPFFRTLLSNMDMVLAKSSIAIASRYAEL"
BASE COUNT          594 a         1320 c         1222 g          601 t
ORIGIN      
        1 acatcctggc caacccggag gtcgagatcc aggtcggcac caacaagatg ccggcgcggg
       61 cacgcaccgc caccggcgag gagcgggcac ggctgtggaa gcaggcggtc gtcttctggc
      121 cgccctatgc cgactaccag gtcaaggccg gcgcgcgcga gatccccgtg gtggtgctcg
      181 atcccgtgaa gtaggtgctg tcatcccgag cgcagcgagg gacctttggc agcgctgatc
      241 aagggtccct cgctttcgct cgggatgaca ctctcttctg cattcaaggc tgtaccgcca
      301 tgctcgacag cgctcacgcc gccagcttca cgagcttctc gatctcgacc gcgcgctgat
      361 cgactttttc gggccgctgg ctgcccaagt tcaccaccag gcggtgaacg ccgagctcgg
      421 cgtatttctt cgtgtcgtcg gccgccatcg ccagcggcgg cgtgatgatg atctcgaatg
      481 ccgcgtcgcg cttgcgtccg gctttggcga acgccgcgtc gaggcgatcg agcatcgcct
      541 tggcgcgcgc cggatcgaga ttgaagccgt accagccggc gccgaagcgc acggcgcggc
      601 ggaaggcggc gtcggcatag ccgccgacga tgatcggcac gtgcggcttc tggatcggct
      661 tggggtcgag ccgcatggtc gcgaacttca cccacttgcc gtcgaagtcg accaccggct
      721 cggtccacag ccggcgcatg acctccaaga attcgtcgca gcgcgcgccg cgatcctccc
      781 agcgatagcc gcaggcctcg acctcctcct tgttccagcc gacaccgatg ccgaaatcga
      841 tgcggccgtc gctcagccaa tccagggtgc acatctcctt ggcggtgtag atcgggttgc
      901 gctgcggcac gagggcgacg ccggtaccca gccgcacctt gctcgtcgcc gccgccagga
      961 agccgaaggt ggcggtcacg tccagcatgc cgccgccttc cggcaccgga atgcgcccgt
     1021 ccttggagcc gggatagccg aacgtgttct tgtcgaacag cgccacgtgc tcgcccatcc
     1081 agatcgactc cagccccatg ccctcggcgc gccggccgaa gtcgcggatc atctgcgggg
     1141 tcgccagggg cgacatgaat gtcgcgaaaa caccgatctt catattggca ttccttcagt
     1201 tgatggggca gcttggcgca ggacaggagc gacatccagc catggaccgt ccgaaccacg
     1261 ccgaaacgcc cgaaaaagac ctgccgctgc gctacgacat caggctgctc ggccgcattc
     1321 tcggcgacac ggtgcgcgcc caggaaggcg agccggtgtt cgagctggtc gaacgcatcc
     1381 gccgcaccgg cgtgcagttc caccgcgacg ccgacgagac cgcccgccag gagctgcagg
     1441 cgatcatgag cagcctgccg accgaccggg cgatccgcat catccgcgcc ttcggctatt
     1501 tctcgcacct cgccaacatc gccgaggatc agcaccacat ccgccgcacc cgcgcctacg
     1561 ccatgaccca ggcgccgccg cggccgggca cgatggccta tgcgctcggc cgcgccagga
     1621 gtgccggcat ttcgcggacg caactgcagg cgttcttcgc ccaggctctg tgcagtccgg
     1681 tcctgacggc gcatccgacc gagatccgcc gcaagagctc gatcgaccgc gagatggaga
     1741 tcgcccggct gctcgacgag cgcgaccggg tcgagttcac gccggaggag ctggccgcca
     1801 accgccgcgc cctgcgccgt gccgtgctca gcctgtggca gaccaacatc ctgcgcgact
     1861 cgcgtctgcg ggtcatcgac gaggtcgcca atggtctggc ttattacgac tacacattcc
     1921 tgcgcgccct gccgatcctc tacgccgacc tcgaggatcg gctcggcgcc gtcgacccgg
     1981 cgtgggagga tctcgaagtg ccgtccttcc tgcgcatggg cagctggatc ggcggcgacc
     2041 gcgacggcaa tccctacgtc acggccgatg tgacacgcca ggcgctcgcc atgcaaagcc
     2101 agcgggcgat gcgcttctat ctcgacgagc tgcacctgct gggcggcgag ctgtcgctcg
     2161 atgaccgcat cgtgcaggtc tccgacggac tgctggcgct cgccgaccgc tcgcccgacc
     2221 gggcaacgga gcgtcagcac gaaccttacc ggcgcgccat tgtcggcatc tatgcgcgcc
     2281 tcgccgccac ggcctggtcg ctcgacaagc tggaagcgcc gctcccgccg gtcggcgagg
     2341 cgccacctta cgaagcggtc gaaggactga tggcggatct cgataccgtc tacgagtcat
     2401 tggtggaaaa cggctcggcc ggcctggcgc gcgggcgcct gcgctcgttg cgccgcgcca
     2461 tcgacgtctt cggcttccat ctcgcatcgc tcgacctgcg gcagaattcg gacgtgcacg
     2521 agcgcgttat ggccgagctc gtcgaggtcg ccagtgtcga gggcagcacc ggtgccgact
     2581 accggacgct cgccgagccc gcgcgggtgg cgctgttggc cggcgaactg ggcaacacac
     2641 ggccgctggc ctcgccgcat ctgtcgtacg gcgaggagac ggccggagag ctcgccatgc
     2701 tcaacgtgac ggccgacgcg catcgccgct acggccgcgc cgccgtgccc aactacgtga
     2761 tctccaaggc cgacagcgtc tccgacatcc tggaagtggc ggtgttgctc aaggaagtcg
     2821 gactcctgcg cccgcgcgag ggccggctcg atgtcgacat cgtgccgctg ttcgagacca
     2881 tcggcgatct gcagcactgc ggcccgatca tggacgagct tttggccctg ccggcctatc
     2941 gccggctgct cgcctcgcgc ggcggcaccc aggaggtgat gctgggctat tccgacagca
     3001 acaaggacgg cggctacctg acctcgacct gggagctcta caaggccgag ctggcgctga
     3061 tcgacatctt caagcgtcac caggtgggct tgcgcctgtt ccacggccgc ggcggttcgg
     3121 tcggccgcgg cggagggccg agctacgagg cgatcctcgc ccagccgccc ggcgccgtgc
     3181 agggccagat ccgcgtcacc gagcagggcg aggtgatcgc cggcaagtat tccaacgccg
     3241 aggtcgggcg gcgcaacctc gaaaccctgg ccgcggccac gctcgaggcg acgctcctgg
     3301 aggccgatcg gccggcgccg cccgccgact atctttccgt catggaggaa ctctcggcgc
     3361 acgccttccg cgcctatcgc gacctggtct acgagaccga gggcttcgac cgctatttcc
     3421 gcgagtcgac ggtgctcgac gagatcgcca cgctcaatat cggcagccgt ccggcgtcgc
     3481 ggtcggacaa gcggcgcatc gaggatctgc gcgccattcc ctgggtgttc agctgggcgc
     3541 aatgccgcct gatgctgccg ggctggtacg gtttcggatc ggcggtcaag gcgtggaccg
     3601 ccgcgcggcc cggcgatggc ctcgcgaggt tgcaggcgat gcacgacgac tggccgttct
     3661 tccgcacttt gctatcgaac atggacatgg tgctggccaa gagctcgatc gcgatcgcct
     3721 cgcgctatgc cgaactg
//
LOCUS       DASWGA010000026         5636 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1142601, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000026 DASWGA010000000
VERSION     DASWGA010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5636
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1142601"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..566
                     /locus_tag="VF991_00490"
     CDS             <1..566
                     /locus_tag="VF991_00490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554936.1"
                     /translation="LELVVSHRLGERPIVLPLIDPKSGAPKPTDVTLADSRKVEPTEL
                     RRRPLGYLVLRGARPVAERLVLNQVLVCEVAAPARLEVEFYRVTRVKARASRESINPD
                     QSMQVAVSGKTVEVPIGALWVPMEQAAAGIVAAALEPDSPGSYLGVGVIPMADDETEA
                     PLYRVMSTQGLSLTPIDGTPTPLCPRR"
     gene            complement(630..1553)
                     /locus_tag="VF991_00495"
     CDS             complement(630..1553)
                     /locus_tag="VF991_00495"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9554937.1"
                     /translation="MSTAPVPKNPPPLKSGMDNPWYDYVPFPKRPKLTWPRNARVASS
                     VLLHLEYWELVPSENSHKDPRFVGEFGSFMPDYRTWTQRDYGNRVGIFRVLDVLDRYQ
                     IRAGVAVNALAVERYPYLVEQFKKRNYEFIAHGRSANRMITSKMSEAEERAEIAEAIA
                     AIDKAAGARPTGWLGQDYGESQRTPQLLADAGLDYVLDWPNDDQPYPMKVGKKFVSLP
                     NQPEWDDVQQLWLRRINTTRYPDLVGEAFELLHQEGGQVFNLSIHPWLMGMPHRIKYL
                     DEALRRIERFANVWHATPGEVVRHYIDTMMD"
     gene            complement(1555..2454)
                     /locus_tag="VF991_00500"
     CDS             complement(1555..2454)
                     /locus_tag="VF991_00500"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9554938.1"
                     /translation="MDPYRFGYSPVVERPKLSWPKGARVAVWVCPNIEHYEYLPAEVR
                     MRNPWPRMPHPDVLGYGGRDYGNRVGLWRMFEVLDKHKVRCTVSLSMSVIEMYPEILE
                     AMEARRWEYMSHGYLNTRYHWGYSEQEEREVIEHSKATHLRLTGRKLRGWFSPAVSNT
                     INTPDLVKEAGLDYFCDFYHDDQPTPVATKHGPLIHVPYTMDINDALISRQPFEAAEF
                     AQMIVDHFDTVYREGSENGRVMCIALHPYMMGAPHRIKHLDRALGYIRQHTDAWVCTA
                     EDILDWYVANGLKPYQNHLGKEA"
     gene            2578..3972
                     /gene="xdhA"
                     /locus_tag="VF991_00505"
     CDS             2578..3972
                     /gene="xdhA"
                     /locus_tag="VF991_00505"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004854 - xanthine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009115 - xanthine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase small subunit"
                     /protein_id="HEX9554939.1"
                     /translation="MADRIRFVLNDQPVELLGVSPMTTLLDWLRDHRGLRGTKEGCAE
                     GDCGACTVVLERADGRREAMNSCIALLGQIDGQVVRTVEGLRRPNGGPHPVQTAMADS
                     DATQCGFCTPGFVMSAYAFALGGEDPDPDTIHDVLAGNLCRCTGYRPIVAALTRAAGL
                     PVEPVASAPGRGDSASFGAFHAPRSLADLLALRNRHPDALLLAGATDLGLLASRARKP
                     PAAIIHVAHVPELMAMREDKKAITIGAAATYAQAMPVLIANFPALKAYLSRLGSRQIR
                     TMGTLGGNIGTASPIGDMPPVLMALETKLTLVSQRGTRDLPLEEFFLAYRKTALAADE
                     VIQSLTLPKLWPGEVFFCDKISKRRDQDISTVAAAYRLRIKNGRIEEARVGVGGMAAT
                     PRRASRVEQALKGQPVTAATFEAAAAAVARDFQPIDDWRGTASYRLSAASNLLRRLYW
                     RITQPERAVEVEAL"
     gene            3969..>5636
                     /locus_tag="VF991_00510"
     CDS             3969..>5636
                     /locus_tag="VF991_00510"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9554940.1"
                     /translation="MNGQVHTAQRHDSALKHVTGQALYIDDIPEPPDTLHAALVLSPI
                     ASGRLRRLDLSQAATAPGVAGVFAAGDIPGHNNIAGPGKQEPLFAGDKVEFAGQPLAV
                     VVADTLDAARAAAERAVIDIEPTEAILDIATALAKQAYVQPPSTILRGDPDAALKAAP
                     HRLSAEFSVGGQEHFYLEGQIAFVLPGEDGDLVVHSSTQHPTEVQHVCAEILGCDFNR
                     VTTVVRRLGGGFGGKESNASWVAGAAALAAAKTGRPVKLRLPREIDMVATGKRHGFDY
                     RYTVGFDGEGRVLALDAVLAADAGWSLDMTPGVVARALTHVDNAYWLPHVRATGYACR
                     TNRQSNTAFRGFGGPQGVVVMEDAIDRIALHLGRDANAVRTLNFYAEGRDETPYGQKV
                     DENHLARCWAEVKQESDFERRRAEIDAFNKASPILKRGLGLFPLKFGISFNIPHMNQA
                     GALVHVYTDGSIRLNHGGTEMGQGLFIKVAQVVAEVFKVDLDRIRPSATSTAEVPNTS
                     PTAASTGSDLNGWAAWEAANTIKQRMVAFAAEHFGTAPADIEFADANV"
BASE COUNT          924 a         1851 c         1895 g          966 t
ORIGIN      
        1 ccctcgagct ggtggtgtcg caccgcctcg gcgaacggcc gatcgtgctg cccctgatcg
       61 atccgaagag cggcgcgccc aagccgaccg acgtgacctt ggccgacagc cgcaaggtcg
      121 agccgaccga gctgcgtcga cggccgctcg gctatctcgt gctgcgcggc gccaggccgg
      181 tcgccgagcg actggtgctt aaccaagttt tggtctgcga agtggccgca cccgcgcggc
      241 tcgaggtcga gttctatcgc gtgacgaggg tcaaggcgcg cgccagccga gaatcgatca
      301 atcccgacca gtcgatgcaa gtggcggtga gcgggaagac ggtcgaggtg ccgatcggtg
      361 ctctgtgggt accgatggaa caggcggcgg caggcatcgt cgctgcggcg ctcgaacccg
      421 attcgcccgg cagctacctc ggcgtcggag tcataccgat ggccgacgac gagacggagg
      481 cgccactgta ccgcgtcatg tccacccaag gcctttcgct gacgccaatc gatgggacgc
      541 cgacgccgct ctgcccgcgg cgctagggca gattccaccc acttccttcc ccggtagtgg
      601 ggaggccgag gggtcggagc gcgattgcgt cagtccatca tggtgtcgat gtagtgccgg
      661 acgacctcgc ccggcgtcgc gtgccagaca ttggcgaagc gctcgatgcg gcgcagcgcc
      721 tcgtcgagat attttatgcg gtgcggcatg cccatcagcc agggatggat cgacaggttg
      781 aacacctgcc cgccttcctg atggagcaac tcgaaggcct cacccaccag atcgggatag
      841 cgcgtggtgt tgatgcgccg tagccaaagc tgctgcacgt cgtcccattc cggctggttg
      901 ggcagcgaga cgaacttctt gccgaccttc atcggataag gctgatcgtc gttcggccag
      961 tcgagcacat agtcgaggcc ggcgtcggcc aggagctggg gcgtgcgctg gctctcgcca
     1021 tagtcctggc ccagccagcc cgtcggccgc gcgcccgccg ccttgtcgat ggcggcgatc
     1081 gcttcggcga tctcggccct ttcctccgct tcgctcatct tggaggtgat catgcgattg
     1141 gccgaacggc catgggcgat gaactcgtag ttgcgtttct tgaactgctc gacgagatag
     1201 ggataacgct cgactgcgag cgcgttcacg gccacgccgg cacggatctg atagcggtcg
     1261 agcacgtcga gcacgcgaaa gatgccgacc cggttgccgt agtcgcgctg cgtccaggtg
     1321 cggtagtcgg gcatgaagct gccgaactcg ccgacaaaac gcggatcctt gtggctgttc
     1381 tcggacggaa ccagctccca gtattccagg tgcagcagca cagaggaggc gacgcgtgcg
     1441 ttgcgcggcc aggtgagctt gggccgcttg ggaaagggca cgtaatcgta ccagggattg
     1501 tccatcccgg acttgagcgg cggcgggttc ttcgggaccg gggcggtgct catctcacgc
     1561 ctccttgccg agatggttct gatagggctt cagcccattg gccacgtacc agtcgaggat
     1621 gtcctcggcg gtgcagaccc aggcatcggt gtgctggcgg atgtagccga gggcgcggtc
     1681 gagatgtttt atgcggtgcg gcgctcccat catgtagggg tgcagcgcga tgcacatcac
     1741 gcggccgttc tcgctgccct cgcgatagac cgtatcgaaa tgatcgacga tcatctgggc
     1801 gaattccgcg gcctcgaacg gctgtcggga gatcagggcg tcgttgatat ccatcgtgta
     1861 aggcacgtgg atcagggggc catgcttggt ggcaaccggc gtcggttggt cgtcgtggta
     1921 gaagtcgcag aaatagtcca ggcccgcttc cttcacgagg tcgggcgtgt tgatcgtgtt
     1981 ggagacggcc ggcgagaacc agccgcgcag cttgcggccg gtcagcctga gatgcgtggc
     2041 cttgctgtgc tcgatgacct cgcgttcctc ctgctcgctg tagccccagt gatagcgggt
     2101 gttgaggtag ccgtggctca tatactccca gcgccgcgct tccatggcct cgaggatctc
     2161 gggatacatc tcaatcaccg acatcgacag cgacacggtg cagcgcacct tgtgcttgtc
     2221 cagaacctcg aacatgcgcc acaggccgac ccggttgcca tagtcgcggc cgccatagcc
     2281 cagcacgtcg ggatgcggca tgcgcggcca cggattgcgc atgcggacct cggccggcag
     2341 gtattcgtaa tgctcgatgt tggggcagac ccagacggcg acccgcgcgc cctttggcca
     2401 ggaaagcttc ggtcgctcga cgacggggga gtagccgaac cggtagggat ccattgctga
     2461 actctcgttg ttggcagccg aagtgcatca cgcggcggca agcaacgcaa cagcgcgctc
     2521 ggcgccgccg aggcgcgaga cttgcgccaa aacaacgccg cgctcacagt cattcgcatg
     2581 gcggaccgta tccgttttgt cttgaacgac cagccggtcg agcttttagg cgtctcgccg
     2641 atgacgaccc tgctcgactg gctgcgcgac catcgcgggc tcaggggcac caaggagggc
     2701 tgcgccgagg gcgattgcgg cgcctgcacc gtggtgctgg agcgcgccga cggccggcgc
     2761 gaggcgatga attcctgcat cgcgctgctg ggccagatcg acggtcaagt ggtgcgcacg
     2821 gtcgaaggcc tgcgccggcc gaacggcggg cctcatccgg tgcagacggc aatggccgat
     2881 tcagatgcca cgcagtgcgg cttttgcacg ccgggcttcg tgatgtcggc ctacgccttc
     2941 gccttgggcg gcgaggaccc tgaccccgac accatccacg atgtgctcgc cggcaatctc
     3001 tgccgctgca ccggctaccg gccgatcgtc gcggcgttga ccagggccgc cggcctgccg
     3061 gtcgagccgg tggcttctgc gccggggcga ggagattcgg cgtcgttcgg cgcctttcat
     3121 gcgccgcgct cgctcgccga ccttttggcg ttgcggaaca ggcatcccga cgcgcttctg
     3181 ctggccggcg ccaccgatct cggcctgttg gccagccggg cgcgcaagcc gccggccgcg
     3241 atcatccatg tggcgcatgt gcccgagctg atggcgatgc gcgaggacaa gaaagcgatc
     3301 acgattggcg ccgccgcgac ctatgcccag gcgatgccgg tgctgatcgc caatttccct
     3361 gcgctgaagg cctatctgtc gcggctgggg tcgcggcaga tccgcaccat gggcacgctc
     3421 ggcggcaata tcggcacggc ctcgccgatc ggcgacatgc cgccggtgct gatggcgctg
     3481 gagacgaaac tcacgctcgt gtcccagcgc ggcacgcgcg acctgccgct ggaggagttc
     3541 ttcctcgcct atcgcaagac ggccttggcg gccgacgagg tcatccaaag cctcaccctg
     3601 cccaagctgt ggccgggcga ggtgttcttc tgcgataaga tcagcaagcg gcgcgaccag
     3661 gatatttcca cggtggctgc tgcctaccgc ctgcgcatca agaacggcag aatcgaggag
     3721 gcgcgcgtcg gcgtcggcgg tatggcggca acgcccaggc gcgccagccg tgtcgagcag
     3781 gcgttgaagg gccagccggt cacagcggca accttcgaag ccgcggccgc cgccgtcgcc
     3841 cgggacttcc agccgatcga cgattggcgt ggcacggcgt cgtatcggct ttccgctgcg
     3901 tccaatctgc tgcgccgtct ctactggcgc atcacccagc ctgagcgcgc ggtcgaggtc
     3961 gaagcgctat gaacggccag gtccataccg cccaacgcca tgacagcgcg ttgaagcacg
     4021 tcaccggcca ggcgctctat atcgacgaca ttcccgagcc gccagacacc cttcatgccg
     4081 cgctggtgct gagcccgatc gccagcggtc gcctgcgccg gctcgatctt tcccaggccg
     4141 caacggcgcc gggcgtggcg ggtgtctttg ccgccggcga catcccgggc cacaacaaca
     4201 tcgccggtcc cggcaagcag gaaccgctgt ttgccgggga caaggtcgag ttcgcgggcc
     4261 aaccgctagc ggtcgtggtc gccgacacgc tcgacgcggc acgcgccgcg gccgaacgcg
     4321 ctgtgatcga catcgagccg acggaggcga tcctcgatat cgccacggcg cttgccaagc
     4381 aggcctatgt gcagccgccc tcgaccatcc tgcgcggcga tcccgacgcg gcgctgaagg
     4441 cggcgcccca tcgcttgagc gccgagttca gcgtcggcgg gcaggagcat ttctatctcg
     4501 aaggccagat cgccttcgtg ttgccaggcg aggacggcga cctggtcgtt cattcctcga
     4561 cccagcatcc caccgaagtg cagcacgttt gcgccgagat tttaggctgc gacttcaatc
     4621 gcgtaacgac cgtcgtgcgc cgcttgggcg gcggcttcgg cggcaaggaa agcaatgcct
     4681 cgtgggtggc cggcgccgcg gcgctggcgg cggccaagac gggccggccg gtaaagcttc
     4741 gcctgccgcg cgaaatcgac atggtcgcga ccggcaagcg tcacggcttc gactatcgct
     4801 atacagtggg tttcgacggc gagggtcgcg tgctggcgct cgacgccgtg ctggcggcgg
     4861 atgccggctg gagcctcgac atgacgccgg gcgtggtcgc ccgcgcgctc acccatgtcg
     4921 acaatgccta ctggctgccg catgtccgcg ccacgggcta tgcctgccgc accaaccggc
     4981 agtccaacac cgcgttccgc ggcttcggcg gaccgcaggg cgtggtcgtc atggaggacg
     5041 cgatcgatcg catcgccctt catctcggcc gcgacgccaa cgcggtgcgg acgctcaact
     5101 tctatgccga gggaagggac gagacgccct acggccagaa ggtcgacgag aaccatctgg
     5161 cgcgctgctg ggccgaggtg aagcaggaaa gcgacttcga gcgacggcgg gccgagatcg
     5221 atgccttcaa caaggccagt ccgatcctga agcgcgggct cggcctgttc ccgctgaagt
     5281 tcggcatctc cttcaacatt ccgcacatga accaggccgg cgcgctggtg catgtctata
     5341 ccgacggctc gatccgcctg aaccacggcg gcaccgagat ggggcagggg ctgttcatca
     5401 aggtggccca ggtcgtggcc gaggtgttca aggtcgatct cgaccgtatc cggccctccg
     5461 ccacctcgac cgccgaggtg cccaacacct cgccgaccgc ggcctcgacc ggctcggatt
     5521 tgaacggctg ggcggcctgg gaggcagcca acaccatcaa gcagcgcatg gtcgccttcg
     5581 ccgccgagca ttttggtact gcacctgccg acatcgagtt cgccgatgcc aacgtg
//
LOCUS       DASWGA010000027         1631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_634684, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000027 DASWGA010000000
VERSION     DASWGA010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_634684"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /locus_tag="VF991_00515"
     CDS             complement(<1..424)
                     /locus_tag="VF991_00515"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9554941.1"
                     /translation="MKKQVSRRGFVLGTTALATLSVPPIVGAQPASVKVGLIHPVTGF
                     VAYNGQQSRLGGTMAIEDVNKAGGIKLMGGTKLEALLGDSQSKVEVGVAEVEKMNEQG
                     VAAYIGCFQSPVGIAASQAASKYNTPFLIDVGASDLIVN"
     gene            557..>1631
                     /locus_tag="VF991_00520"
     CDS             557..>1631
                     /locus_tag="VF991_00520"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallocarboxypeptidase"
                     /protein_id="HEX9554942.1"
                     /translation="MRAAALAASLLALVLAAPLSAQPDITPRAPSDYRQTDAVLTHYP
                     ALGHVRLASPAFDKPEPSLTNQDEMATFLATLARESRHVRVKSLGRSTLGRDIPLLYV
                     TREGLDDPAAIGRLGRPVIWLIGQQHGNEPAGGEAMLAVAAALSSGELEPLLGQLSVV
                     IVPRGNVDGAAADRRDLASGADPNRDHLLLSQPEVRALHVAMRALPPDVVVDHHEFSV
                     AWRWVEKFGALQGPDVTILEATHPAVPRPLTDIAHSLYRPALEAAMARHGLSSHDYVT
                     TNADRTDRSVSLGGNAPGIARNTFGLRGSVSYLIETRGVGIGLQSYQRRVATHYLLAK
                     AMLEASAADPASLRNRIDAARAAA"
BASE COUNT          250 a          599 c          519 g          263 t
ORIGIN      
        1 ggttcacgat caggtcggag gcgccgacat cgatcaggaa cggcgtgttg tacttcgacg
       61 cggcctggct ggcggcgatg ccgaccgggc tctggaagca gccgatatag gccgccacgc
      121 cctgctcgtt catcttctcg acttcggcga cgccgacttc gaccttggac tggctgtcgc
      181 ccagcagcgc ctcgagcttg gtgccgccca tcaacttgat gccgcccgcc ttgttcacat
      241 cctcgatggc catggtgccg ccgagccggc tctgctggcc gttataagcg acgaagccgg
      301 tcaccggatg gatcaggccg actttcaccg acgcaggctg cgcgcccacg atcggcggaa
      361 cgctcagggt ggcgagcgcc gtcgttccca acacgaagcc gcgacgcgaa acctgctttt
      421 tcatcgtgag gccccttctt gattccccga acgacgctac gatagcgcct gtccacggac
      481 aaccgccaac cgcgggagcg cgcgatgtcc aagatcctgt cgccggccga gctcgaccag
      541 gccgtagaat aggccgatgc gtgccgccgc ccttgccgcc tctcttcttg ccctcgtcct
      601 tgcagcgccg ctgtcggcgc agccggacat cacgccgcgc gcgccgtcgg actatcgcca
      661 gaccgacgcc gtgttgacgc actatcccgc cctgggccac gtacgactgg ccagtcctgc
      721 cttcgacaag cccgaaccgt cgctcaccaa ccaggacgag atggcgacct ttctcgcgac
      781 cctcgcccgc gagtcgcgac atgtgcgcgt gaaaagcctc ggacgatcga ccctgggccg
      841 cgacatcccg ctgctctatg tcacccggga agggctcgac gatcccgccg ccattggccg
      901 gctcggccgt ccggtgatct ggctgatcgg ccagcagcac ggcaacgaac cggcgggcgg
      961 cgaggccatg ctggcagtcg ctgccgcact gtcgtcgggc gagctagaac cgctgctcgg
     1021 gcagctgagc gtcgtcatcg tgccgcgggg caatgtcgac ggcgcggcgg ccgaccgtcg
     1081 cgatctcgcg agcggcgccg atccgaatcg cgaccacctg ctgctgagcc agcccgaagt
     1141 ccgcgcgctc catgtggcga tgcgcgccct gccgcccgat gtcgtggtcg atcatcacga
     1201 attcagcgtc gcctggcgct gggtcgagaa gttcggtgcc ctgcagggtc ccgatgtgac
     1261 gatcctcgag gcgacgcatc ctgcggtgcc gcgcccgctc accgatatcg cccacagcct
     1321 ctaccggccg gcgctggagg cagcgatggc gcgtcatggc ctgtcgagcc acgactacgt
     1381 cacgaccaac gccgaccgga ccgaccggtc ggtctcgctg ggcggcaatg cgcccggcat
     1441 cgcgcgcaac acctttgggc tgcgcggcag cgtctcctat ctgatcgaga cgcgcggcgt
     1501 cggcatcggg ctgcagagct atcagcgccg ggtcgccacg cactacctgc tggccaaggc
     1561 catgctcgag gcgtcggccg ccgatcctgc cagcctgcgc aaccgcatcg atgccgcgcg
     1621 cgcggccgcc g
//
LOCUS       DASWGA010000028         2449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2028397, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000028 DASWGA010000000
VERSION     DASWGA010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2028397"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VF991_00525"
     CDS             complement(<1..236)
                     /locus_tag="VF991_00525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554943.1"
                     /translation="MDFELPGEDHPKRKGVRAWFEANPQPSGRDLAEAGYVVPHWPKP
                     WGLAAEPELQLIIDEEMKRAGVIPPRNPVAINNCA"
     gene            371..1615
                     /locus_tag="VF991_00530"
     CDS             371..1615
                     /locus_tag="VF991_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX9554944.1"
                     /translation="MDDRAISQAVANPRTYVDQPAYDALFAGLRRRSPVHWAEPDGYR
                     PFWLVTRHADIMEIERQNDRFVNEPRLILSTVGDEHRLATAIASKTALRTLVNMDNPD
                     HRLFRAIAQAWFMPPNLQKIEARVAALAREFVDRMATLDGECDFARDVANWYPLRVIM
                     TILGVPAEDEPLMLRLTQELLGSSDPDMRRSGARRGTYQDFHAYFAEVTADRRRHPRD
                     DVASVIANAVIDGKPIGEREAMSYYVIIATAGHDTTSSTTAGGLLALLQHPEALARLR
                     AEPSLLATAVEEMVRWVSPVKHFFRTATEDYVLRGQNIKAGDSLMMCYPSGNRDEEVF
                     SDPFRFQIDRSPNRHLAFGFGPHLCLGMHLARLEIRAFFRELLPRLDHIELAGEPAWV
                     EANFVSGLKRMPVRYAMSKAAA"
     gene            1615..>2449
                     /locus_tag="VF991_00535"
     CDS             1615..>2449
                     /locus_tag="VF991_00535"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9554945.1"
                     /translation="MPDGALIIIGAGHAAGQLVASLAQDGFTGGVTVIGDEPHLPYQR
                     PPLSKKFLAGEIELDQLYVKPEAFYAKAGTTLMLGTRVAGIDRQARAVVTEGGPVLRY
                     STLVIATGSRPRALALPGADLEGVLYLRTIADVQAIRRHLEPGRRLVIVGGGYIGLEL
                     AAVAAKRGVQVSVLEQTARVMGRGVGPVVSAFYERLHREEGVTIATGTTIVGFEGNGR
                     VEHVVCDDARVAADLVVVGVGAIPNTELAREAGLAVDNGIVVDAQCHTQDPVIHAIGD
                     CA"
BASE COUNT          400 a          840 c          793 g          416 t
ORIGIN      
        1 gcgcagttgt tgatggcgac cggattgcgc ggcggtatca ccccggcgcg cttcatctcc
       61 tcgtcgatga tgagctgcag ctcgggctct gcggcgagcc cccacggctt gggccaatgc
      121 ggcacgacgt agcccgcttc ggcaagatcg cggccgctgg gttgcgggtt ggcctcgaac
      181 catgcccgca cccctttacg tttgggatgg tcctcgcccg gcaattcgaa atccatggcg
      241 ccgctccatt ctgtccggcg atgctctcga cagacgaatt tggagtcaac aaaattaact
      301 aacaaatgtt cgatttttat ggcgcaagcc gccctgcggt cctaggctac ggacgacgac
      361 ggaggcggcg atggacgaca gggcaatcag ccaagcggtc gcaaatcccc ggacctacgt
      421 ggatcagccg gcctacgatg cgctgtttgc cggcctgcga cgccgctcgc cggtgcattg
      481 ggcggaaccc gacggctacc ggccgttctg gctggtcacc cggcatgccg acatcatgga
      541 gatcgaacgc cagaacgacc ggttcgtgaa cgagccacgc ctcattctca gcaccgtcgg
      601 agatgagcat cgcctggcga ccgcgatcgc cagcaagacc gcgctgcgca cgctggtgaa
      661 catggacaac cccgaccatc gcctgttccg cgccatcgcc caggcctggt tcatgccgcc
      721 caacctgcag aagatcgagg cgcgcgtggc ggcgctggcg cgcgagttcg tcgaccgcat
      781 ggcgaccctg gatggcgagt gcgacttcgc gcgcgacgtc gccaactggt atccgctcag
      841 ggtgatcatg accattttgg gcgtgccggc ggaggacgaa cccttgatgc tgcgcctcac
      901 ccaggagctg ctgggctcga gcgatcccga catgagacga agcggcgccc gacgcggcac
      961 ctatcaggat ttccatgcct atttcgccga ggtgacggcc gaccggcggc gccatccgcg
     1021 cgacgacgtc gcgagtgtaa tcgctaatgc cgtgatcgac ggcaagccga tcggcgagcg
     1081 cgaggcgatg tcctactacg tgatcatcgc gacggcgggt cacgacacga cgagctcgac
     1141 gaccgccggc ggcctgctgg cgctgctcca gcatcccgag gctttggccc gcctgcgcgc
     1201 cgagcccagc ctgctggcga ccgcggtcga ggaaatggtc cgctgggtct cgccggtaaa
     1261 gcatttcttc cgcaccgcga cggaggacta cgtgctgcgc ggccagaaca tcaaggccgg
     1321 cgacagcctg atgatgtgct acccgtcggg caatcgcgac gaagaggtgt tttccgatcc
     1381 cttccgcttc cagatcgacc gatcgcccaa ccgccatctc gccttcgggt tcggcccgca
     1441 tctctgcctc ggcatgcatc tggcgcggct ggagatccgc gccttcttcc gcgaattgct
     1501 gccgcgcctg gatcatatcg agctggccgg cgagcctgcc tgggtcgaag cgaacttcgt
     1561 gagcggcctc aagcgcatgc ccgtgcgcta cgccatgtcg aaggccgccg cctaatgccg
     1621 gatggcgccc tgatcatcat cggcgccggc catgccgccg gtcagctcgt cgccagcctg
     1681 gcgcaggacg gttttaccgg cggcgtcacc gtcatcggcg acgagccgca cctgccttac
     1741 caacgccctc ccttgtcaaa gaagtttctc gccggcgaga tcgagctcga tcagctctat
     1801 gtcaagcccg aggccttcta tgccaaggcc gggacgacgc tgatgctcgg cacccgcgtc
     1861 gccggcatcg accgccaggc gcgggccgtc gtcaccgagg gcggcccggt cctgcgctat
     1921 tccaccctgg tcatcgccac cggcagccgc ccgcgcgccc tcgcgctgcc cggcgccgat
     1981 ctggaaggcg tgttgtacct gcgcacgatc gccgacgtgc aggcgatccg tcgccatctc
     2041 gagcccggcc ggcgcctggt gatcgtgggc ggcggctata tcggcctcga acttgccgcc
     2101 gttgccgcca aacgaggcgt gcaggtcagc gtcctcgaac agacggcgcg ggtgatggga
     2161 cgcggcgtgg gccccgtggt ttcggctttc tacgaacgcc ttcaccgcga ggaaggcgtg
     2221 acgatcgcga ccggcacgac gatcgtgggc ttcgaaggca atggacgggt cgagcatgtc
     2281 gtttgcgacg acgcgcgggt tgcagccgac ctggtcgtgg tgggcgtcgg cgccatcccc
     2341 aacaccgagc tggcccgcga ggccgggttg gccgtcgaca acggcatcgt ggtcgacgcg
     2401 caatgccaca cgcaggatcc ggtcatccat gcgatcggcg attgcgcca
//
LOCUS       DASWGA010000029         2313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1522377, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000029 DASWGA010000000
VERSION     DASWGA010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1522377"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VF991_00540"
     CDS             <1..288
                     /locus_tag="VF991_00540"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718201.1"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEX9554946.1"
                     /translation="KALEKAGWTPKDLDLIEANEAFAAQACAVNKDLGWDTGKVNVNG
                     GAIALGHPIGASGARVLTTLLYEMQKRDAKKGLATLCIGGGMGIAMCVQRD"
     gene            complement(386..862)
                     /locus_tag="VF991_00545"
     CDS             complement(386..862)
                     /locus_tag="VF991_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007562398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9554947.1"
                     /translation="MSDEPRPPLPPFTPETAAQKARAAEDAWNSRDPERVSLAYTADS
                     VWRNRSEFFQGREAIKAFLARKWARELDYRLIKELWTCGADRIAVRFAYEWHDDSGNW
                     FRSYGNENWEFDERGLMRRRLASINDLPIAASERKFHWPAPGPRPADHPSLSDFGL"
     gene            complement(855..1316)
                     /locus_tag="VF991_00550"
     CDS             complement(855..1316)
                     /locus_tag="VF991_00550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554948.1"
                     /translation="MKTFVAVVALVLSLAACSSAAPFTSPWEETWGPNFPQPKPGDAA
                     LYIVRDAAPEGAPPINMTIGRRPVGGLASLTWMRFDLQPRLYDLRAFGTQTSSELIIT
                     VDPGQTRFFQIEHKDSGSAEILEISPRDGRRIVRKGQHIMEMSEPPRVTRE"
     gene            complement(1368..>2313)
                     /locus_tag="VF991_00555"
     CDS             complement(1368..>2313)
                     /locus_tag="VF991_00555"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9554949.1"
                     /translation="IVSLLGVAAFVGASGTVVYVLTSISLLPSLVPPADLSRTNARLE
                     LARAIVSLAAPFVAGLLAQLLSPTWGYALAAFGAALALACILALPKAPAPTSAAQRPS
                     FVASIQAGARFVVRHELLRGISLCAICWNFAFFALLAIWAPLALGPLGLDPAHMGLAQ
                     SAYGAGLILGALVAPVSARRLPPFATLIFGPVVSVIAAGLFLVAASADPSVSGFACAA
                     AGHFLVGFGPMLWLICQITVRQLVTPAPLMGRVNATLQTAIYGVRPLGALAGGFMAAH
                     AGLHAALLLVAAAFALSTLVIVLSPLARLQALPEPACV"
BASE COUNT          418 a          756 c          836 g          303 t
ORIGIN      
        1 aaggcgctcg agaaggcggg ctggacgccc aaggacctcg acctgatcga ggccaacgag
       61 gcgttcgccg cgcaggcctg cgccgtcaac aaggacctcg gctgggacac cgggaaggtc
      121 aacgtcaacg gcggcgcgat cgcgctcggc catccgatcg gcgcctcggg cgcgcgcgtg
      181 ctcaccacgc ttctctacga gatgcagaag cgcgacgcca agaagggcct cgccacgctc
      241 tgcatcggcg gcggcatggg catcgccatg tgcgtccagc gcgactgatt ttcttgccgg
      301 actcggcgca ttcacatgcg cctgagggcc tccaggcccg cctcataagt ctgagcgggc
      361 ctggaggccc gcggtccggc aagacttaaa gcccgaagtc gctcaggctc ggatgatcgg
      421 caggcctggg cccgggcgcc ggccaatgga acttgcgctc gctcgcggcg atcggcaggt
      481 cgttgatcga ggcgaggcga cggcgcatca ggccgcgctc gtcgaattcc cagttctcgt
      541 tgccgtatga ccggaaccag ttgcccgaat cgtcgtgcca ttcgtaggcg aagcgcacgg
      601 cgatgcggtc ggcgccgcag gtccacagct ccttgatcag gcgataatcg agttccctgg
      661 cccacttgcg ggcgaggaac gccttgatcg cctcgcgccc ctggaagaac tccgagcggt
      721 tgcgccacac gctgtccgcc gtgtaggcca gcgacacccg ctccggatcg cggctgttcc
      781 aggcatcctc ggcggcgcgt gctttctgcg cggccgtctc gggcgtgaag ggtggtagcg
      841 gcgggcgggg ctcgtcactc acgggtgaca cggggcggtt cactcatttc catgatgtgc
      901 tgacccttgc gcacgatgcg ccgcccatcg cgcggggaaa tctcgagaat ctccgcactg
      961 ccagagtcct tgtgctcgat ctggaaaaag cgcgtctggc cagggtcgac ggtgatgatg
     1021 agctcgctgc tcgtttgcgt gccaaaggcc ctgaggtcgt agagccgggg ctgcaggtcg
     1081 aagcgcatcc aggtgaggct ggcgaggccg ccgaccggcc gccggccgat ggtcatgttg
     1141 atcggcggcg cgccctccgg cgcggcatcg cgcacgatat aaagcgcggc gtcacccggc
     1201 ttcggctgcg ggaaattcgg gccccacgtt tcctcccagg gcgatgtgaa cggcgccgcc
     1261 gatgagcagg cagcgagcga aagcaccaat gcgacaacag cgacgaacgt cttcatgcaa
     1321 cgacctccgc gggcagcgtc ggccggttgg gcttgagggt caaggtgtca gacgcaggcg
     1381 ggctcgggca gggcctgcag ccgcgccagc ggcgacagca cgatcaccag ggtggaaagc
     1441 gcgaaggctg ccgcgaccaa cagcaaggcg gcgtgcaatc cggcgtgggc cgccatgaag
     1501 ccgccggcca gcgcgcccag cggtctgaca ccgtagatcg cggtctgcaa ggtggcattg
     1561 acccggccca tcaacggtgc cggcgtcacc agctggcgca ccgtgatctg gcagatcagc
     1621 cacagcatcg ggccgaagcc caccaggaaa tggccggcgg cagcgcaggc aaagccgctc
     1681 accgaggggt cggccgaggc agccacgagg aacaggccgg cggcgatcac cgacacgacg
     1741 ggcccgaaga tcagggtggc gaacggcggc aggcgccgcg ccgagaccgg cgccaccagc
     1801 gcgcccagga tcaggccggc gccataggcc gactgggcaa ggcccatgtg cgccggatcg
     1861 aggccgagcg gacccagcgc cagcggtgcc cagatcgcga gcaaggcgaa gaaggcgaag
     1921 ttccagcaga tggcgcaaag gctgatgccg cgcagcagct cgtggcgcac cacgaagcgg
     1981 gcgccggcct ggatggaggc gacgaaagag ggtcgctgcg cagcgctggt cggtgcgggg
     2041 gctttcggca aagcgagaat acaggccaag gccagggcgg cgccgaaggc ggcgagggcg
     2101 tagccccagg tcggtgacag gagctgggcg agcaggcccg ccacgaaggg cgctgccagg
     2161 ctcacgatgg cgcgcgccag ctccagacgt gcattggtgc gtgacaggtc ggccggcggc
     2221 accaggctgg gcagcagcga gatcgatgtc agcacataga ccacggtgcc cgaggcgccg
     2281 acgaaagcgg caacgcccag caggctcacg atg
//
LOCUS       DASWGA010000030         4865 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1775798, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000030 DASWGA010000000
VERSION     DASWGA010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4865
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1775798"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..591)
                     /locus_tag="VF991_00560"
     CDS             complement(<1..591)
                     /locus_tag="VF991_00560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009207972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9554950.1"
                     /translation="MTDETTSPPNPPRRRAPHFVNREAWDPYVAERLTAEQERYYMAG
                     QWKLMWWRFRRHRPAVVSAIFLGLVYFSTVISELIAPYDLHTRHSGYIFAPPQQVHFI
                     HDGEFLGPFVYALKTTRDMETLQRVYTPDTAKPQPLHFFCLGDAYEFWGLVEGRFHFI
                     CPPEGGHFFWLGTDRLGRDMFSRIVYAARISLTIGII"
     gene            complement(593..1591)
                     /locus_tag="VF991_00565"
     CDS             complement(593..1591)
                     /locus_tag="VF991_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004443698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9554951.1"
                     /translation="MLRYVARRILLMIPTLFIISALVYFIIDLPPGDCVTSQIDELLA
                     RGDPDALQRADELRQMYGLNLPLWERYMHWVSGVFRWDFGLSCQDTVPVADLIGERLA
                     LTIVMETCTIAFIWIVSFVIGVYAATHQYKLGDYVASFIGFIGLSIPNFLLALVLLYV
                     GKVYFGLSIGGLMDPEYLEQPMSWAKAGSVLQHLIIPVIVIGMSGTAGMIRRLRANLL
                     DELQKQYVVTGRAKGLPPLRLLIKYPLRHAINPFVADIGGLLPEVISGSVIVSVVLSL
                     PTTGPMLLGALKTQDVNLAATFLLFVATLTVIGMLVSDLALAALDPRIRFGATSEK"
     gene            complement(1594..3594)
                     /locus_tag="VF991_00570"
     CDS             complement(1594..3594)
                     /locus_tag="VF991_00570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9554952.1"
                     /translation="MKDLLRVENLTVDFGVHEGTLRAVDHVTFSIPPGGTLALVGESG
                     SGKSVCSQAIMGLLPRTATVSSGSILFDDPRGTAGPVDLARLDRTGPEMRAIRGGAIS
                     IIFQEPMTSLSPLHTVGDQIGEAVELHAGGPFSNMHMLGDQISEAARRSGRKLGRAAI
                     DALTTDMLRMVGFPDPKRALRTYPFELSGGLRQRAMIAMALVCRPALLIADEPTTALD
                     VTIQAQILRLIKDLQAELGMALLMITHDLGVVANVADDVVVMYRGKVVESGDLHDIFR
                     DPQHDYLKALLHAVPRFDMAGERLVPIREITAATGHLLKEKPTAPPTTSFNPEAPVLK
                     VRHLSKTFRIRKADTLFEQLMGGGTTRTIRAVNDVSFDVERGECLGLVGESGCGKTTL
                     SKILMRGISADPNEETGRIVFDEWGRKIDVLALDGRELDRFRTKLQFIFQDPFGSLNP
                     RMTVYDILVEPLIIHGIGDDAYRREMVSELMEMVGLDRRHLSRYPHSFSGGQRQRIGI
                     ARALALRPDMVICDEPVSALDVSIQAQILNLLKDLQKQLGLTYLFISHNLAVVDYIAD
                     RIAVMCAGRLVELAPSGELFKRPLHPYTKALLSAVPVPDPDARLDLGALMEGKASDPA
                     AWPVPFRDTGREPVFWTEAAPGHYVRMSRPDGRQPDEQEAGN"
     gene            complement(3591..4097)
                     /locus_tag="VF991_00575"
     CDS             complement(3591..4097)
                     /locus_tag="VF991_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554953.1"
                     /translation="MSSADLRYPRQTLVADYVRAAAGVLLCGAPLLALEVNRWLALIL
                     AAGFVLFAVFLARTALRHHTRYVLGPDTLCADGPAGTLVEWNRLDRLKLSYFSTKRDR
                     KDGWMQLTVGSAGARTVKIDSSLDGFHDVVERAAEAAKATGLTLSEATRANLRAMGIS
                     VAGQEETV"
     gene            complement(4094..>4865)
                     /locus_tag="VF991_00580"
     CDS             complement(4094..>4865)
                     /locus_tag="VF991_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017968227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9554954.1"
                     /translation="MASGGMTSWQALTEEAARWHDAGRVADLWWRDDDAGDAGPAADR
                     LIALHRQAGVPLAIAVVPAHATQALADRLAGEPGIDVLQHGYAHVNHAPLGEKKIELG
                     PHRPAMMVLGELGTGWLALERLFAGRGLPVLVPPWNRIAPGLVPALPEIGFRGLSTFG
                     RRRERPLRGLLEINTHVDLVDWKGGRCFVGEQAALGALVGALAQARTVSQEPVGLLSH
                     HLAMDARAWDFLRSMWEEAQKMPSLRIRSARELWEARA"
BASE COUNT          849 a         1539 c         1737 g          740 t
ORIGIN      
        1 gatgatgccg atggtgagcg agatgcgcgc ggcatagacg atgcggctga acatgtcgcg
       61 gccgaggcga tcggtgccga gccagaaaaa gtgcccgccc tcgggcggac agatgaaatg
      121 gaagcggcct tcgacgaggc cccagaattc gtaagcatcg cccaggcaga agaagtgcag
      181 gggctgcggc ttggccgtgt cgggcgtgta gacgcgctgc agggtttcca tgtcgcgcgt
      241 ggttttcagc gcatagacga acggccccag gaactcgccg tcatggatga aatggacctg
      301 ctgcggcggc gcgaagatgt agcccgaatg gcgggtgtgc aggtcgtagg gcgcgatgag
      361 ctcgctgatc acggtcgaga aatagaccag cccgagaaag atcgccgaga ccacggccgg
      421 ccgatggcgg cggaagcgcc accacatcag cttccattgg ccggccatgt agtagcgttc
      481 ctgctcggcg gtcaggcgct cggcgacata gggatcccat gcctcgcggt tgacgaagtg
      541 gggggcgcgg cggcgcggcg ggttgggcgg gctggtggtt tcgtcggtca tgtcacttct
      601 ccgacgtcgc gccgaagcgg atgcgcggat cgagcgcggc cagcgccagg tcggagacca
      661 gcatgccgat caccgtcagc gtcgccacga acaacaggaa ggtggcggcg agattgacgt
      721 cctgggtctt gagcgcgccc agaagcatcg ggccggtggt cggcagcgac agcacgaccg
      781 agacgatgac cgagcccgag atcacctccg gcaggagccc gccgatgtcg gcgacgaagg
      841 ggttgatggc gtggcgcagc ggatacttga tcagcagcct gagcggcggc aggcccttgg
      901 cgcggccggt gacgacatac tgcttctgca gctcgtcgag gaggttggcg cgcaggcggc
      961 ggatcatgcc ggcggtgccc gacatgccga tgacgatcac cgggatgatg aggtgctgca
     1021 gcaccgagcc ggccttggcc cagctcatcg gttgctcgag atactccgga tccatcaggc
     1081 cgccgatcga caggccgaaa tagaccttgc cgacatagag caggaccagc gccagcagga
     1141 agttcgggat cgagaggccg atgaagccga tgaaggaggc gacatagtcg ccgagcttgt
     1201 actggtgggt ggcggcatag acgccgatca cgaacgagac gatccagatg aaggcgatgg
     1261 tgcaggtttc catcacgatg gtgagggcca gccgctcgcc gatgaggtcg gccaccggca
     1321 cggtgtcctg gcagctgaga ccaaagtccc agcggaagac gccggagacc cagtgcatgt
     1381 agcgttccca cagcggcagg ttgaggccgt acatctggcg cagctcgtcg gcgcgctgca
     1441 gcgcgtcggg atcgccgcgt gccagcagct cgtcgatctg tgaggtcacg cagtcgccgg
     1501 gcggcaggtc gatgatgaag tagacgagcg cgctgatgat gaagagcgtc gggatcatca
     1561 gcaggatgcg gcgggcgacg tagcgcagca tgatcagttc cccgcttcct gttcgtctgg
     1621 ttgccgtcca tccggccgcg acatgcggac atagtggccg ggcgcggcct ccgtccagaa
     1681 caccggctcg cggccggtgt cgcggaacgg caccggccag gcggccgggt cggacgcctt
     1741 gccttccatc agcgcgccga gatcgaggcg cgcgtcgggg tcgggcaccg gcacggccga
     1801 caacagcgcc ttggtgtagg gatgcagcgg cctcttgaac aattcgcccg acggcgccag
     1861 ctcgaccagc cggccggcgc acatcacggc gatgcggtcg gcgatgtagt cgaccacggc
     1921 caggttgtgc gagatgaaga ggtaggtgag cccgagctgc ttctgcaggt ctttcaggag
     1981 gttgaggatc tgcgcctgga tcgacacatc gagcgccgac acgggctcgt cgcagatcac
     2041 catgtcgggc ctgagcgcca aggcgcgggc gatgccgatg cgctgacgct ggccgccgga
     2101 aaaggagtgc ggatagcggc tgagatggcg gcggtcgagg cccaccatct ccatcaattc
     2161 gctcaccatc tcgcggcgat aggcatcgtc gccgatgccg tggatgatca gcggctcgac
     2221 caggatgtcg tagacggtca tgcgcggatt gagcgagccg aacgggtcct ggaagatgaa
     2281 ttgcagcttg gtgcggaagc ggtcgagctc gcggccgtcg agcgccagca cgtcgatctt
     2341 gcggccccac tcgtcgaaca cgatgcggcc ggtttcttcg ttgggatcag cggaaatgcc
     2401 gcgcataagg atcttgctga gcgtggtctt gccgcagccc gattcgccca ccagccccag
     2461 gcactcgccg cgctcgacgt cgaagctcac gtcgttgacg gcgcggatgg tgcgcgtcgt
     2521 gccgccgccc atgagctgct cgaacaaggt gtcggccttg cggatgcgga aggtcttgga
     2581 aagatggcgc accttcagca ccggcgcctc gggattgaac gaggtggtgg gcggcgcggt
     2641 cggcttctcc ttcaggagat ggccggtcgc ggcggtgatc tcgcggatcg gcaccaggcg
     2701 ctcgcccgcc atgtcgaagc gcggcacggc gtgcagcagc gccttgagat agtcatgctg
     2761 ggggtcgcgg aaaatgtcgt gcaggtcgcc cgattcgacc accttgccgc ggtacatgac
     2821 gaccacgtcg tcggcgacgt tggcgaccac gccgaggtcg tgggtgatca tcaggagcgc
     2881 catgccgagc tcggcctgga ggtccttgat gaggcgcagg atctgcgcct ggatggtgac
     2941 gtcgagcgcg gtggtcggct cgtcggcgat caggagcgcc ggccggcaga ccagcgccat
     3001 ggcgatcatg gcgcgctggc gcaggccgcc cgagagctcg aaggggtagg tgcgcagggc
     3061 gcgcttggga tcggggaagc ccaccatgcg cagcatgtcg gtagtgagcg catcgatcgc
     3121 agcgcggccg agcttgcggc cggaccgccg ggcggcctcg ctgatctggt cgcccagcat
     3181 gtgcatgttg ctgaacgggc cgccggcatg cagctcgacc gcctcgccga tctggtcgcc
     3241 cacggtatgc agcggcgaca gcgaggtcat cggctcctgg aagatgatgg aaatggcgcc
     3301 gccgcggatg gcccgcatct cgggcccggt gcggtcgagg cgggcgaggt cgacagggcc
     3361 cgcggtgccg cgcggatcgt cgaacaggat cgagcccgag ctgacggtgg cggtgcgcgg
     3421 cagcaggccc atgatggcct ggctgcacac cgacttgccc gagcccgatt cgcccaccag
     3481 ggcgagcgtg ccgccgggcg ggatcgaaaa cgtcacgtga tcgaccgccc gcaaggtgcc
     3541 ttcgtgaacg ccgaaatcga cggtcaggtt ttcgacgcgc agcaggtcct tcatacggtt
     3601 tcttcctgac ctgccaccga gatgcccatc gccctgagat tggcgcgggt cgcctcgctc
     3661 aaggtcaagc ccgtcgcctt ggccgcctcg gccgcccgtt cgaccacgtc gtggaagccg
     3721 tcgagcgatg aatcgatctt cacggtgcgg gcgccggccg aaccgacggt gagctgcatc
     3781 cagccgtctt tgcggtcgcg cttggtcgag aagtagctga gcttcagccg gtcgagccgg
     3841 ttccattcga ccagggtgcc ggccgggccg tcggcgcaga gcgtgtccgg ccccagcacg
     3901 tagcgggtgt gatgacggag cgcggtgcgc gcgaggaaga cggcaaacag cacgaaccct
     3961 gcagccagga tcagcgccag ccagcgattg acctcgagtg ccagcagcgg ggcgccacac
     4021 aacagcacgc ccgccgcggc acgaacatag tcggccacga gcgtctgacg aggatagcgc
     4081 agatcggctg aactcaagcg cgtgcctccc acaactcgcg cgccgagcga atacgaagac
     4141 tcggcatttt ttgtgcctct tcccacatcg accttaggaa atcccacgcc cgggcgtcca
     4201 tcgcaagatg atgactgaga agcccgaccg gctcctgcga cacagtgcgt gcctgtgcca
     4261 atgcgcctac cagggcgccc agcgccgcct gttcgccgac aaagcagcga ccgcccttcc
     4321 agtcgacaag gtcaacgtgc gtgttgatct ccaaaaggcc gcgcagcggg cgttcgcggc
     4381 gccggccgaa cgtcgacagg ccgcgaaaac cgatttccgg cagggctggc accaggccag
     4441 gcgcaatgcg gttccagggc ggcaccagaa ccggcagccc acggccggcg aacagccgct
     4501 cgagcgccag ccagccggtg ccgagctcgc ccagcaccat catggccggc cggtgcgggc
     4561 ccagctcgat cttcttttct cccagcgggg catgattcac atgggcgtag ccgtgctgca
     4621 gcacgtcgat gccgggctcg ccggcgaggc gatccgccag ggcctgtgtg gcgtgcgccg
     4681 gcacgaccgc gatcgccagc ggcacgccag cctggcgatg gagcgcgatc agccggtcgg
     4741 ccgccgggcc ggcgtcgccg gcgtcgtcgt cgcgccacca cagatcggcg acgcggccgg
     4801 cgtcgtgcca gcgcgcggct tcctcggtca gcgcctgcca gctagtcatc ccgccgctcg
     4861 ccatg
//
LOCUS       DASWGA010000031         9615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1142949, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000031 DASWGA010000000
VERSION     DASWGA010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9615
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1142949"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1065
                     /locus_tag="VF991_00585"
     CDS             <1..1065
                     /locus_tag="VF991_00585"
                     /inference="COORDINATES: protein motif:HMM:NF012731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HEX9554955.1"
                     /translation="YLNLDRLIKIIREEDEPKPKMIKAFKLTDLQAEAILNMRLRALR
                     RLEEFEIKGEHKKLTAERRELKALLKDEDRKWQAIAAEVQETKRKFGGKTELGRRRTE
                     LADAPAEVEHAVEDFVEREPITVVCSEKGWIRAAKGHLDDKAAAELKYKEGDGPRFAV
                     HAQSTDKILVFATNGRFYTLGCDKLPSARGHGEPIRLMIELLNEQDIVQLEVLKGGRK
                     FLVASDAGRGFIVPEDEVVAQTKNGRQVLNLADREKAQTFAIVPEGADSVAALSEGRK
                     LLIFPLEQVPEMGRGRGVLLQKSKADRLSDAQAFRLDDGLPWSNRVIPASELKFWRGE
                     RAQAGRMPEKGWPRAKRFKD"
     gene            1070..1876
                     /locus_tag="VF991_00590"
     CDS             1070..1876
                     /locus_tag="VF991_00590"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013421029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEX9554956.1"
                     /translation="MDLTLLWKTVLIGIVEGITEFLPVSSTGHIILAEELLHFEGSPG
                     KVFEIVIQLGAILAVCVLYRVKIWNTVTGVVRREPIAMHFAAAVIVAFLPAAVVGVAA
                     HKYVKAMLDSPAVVAVALIVGGFAILIIEHFAQRPRVKSVDAIDLKTALFVGVCQCLA
                     MIPGVSRSGATIMGARVLRVDRATAAEFSFFLAIPTMIGATVYDLYMNWSTLDWQGSG
                     LIAVGFVTAFLSALIVVGAFVRFISRHGFGVFAWYRIAAGALALALLLMR"
     gene            2060..3166
                     /gene="dctP"
                     /locus_tag="VF991_00595"
     CDS             2060..3166
                     /gene="dctP"
                     /locus_tag="VF991_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEX9554957.1"
                     /translation="MQRRKFLHTAGVGGAAAVTAGTLAAPAIAQSMPELKWRLASSFP
                     KSLDTIYGAGEYFAKRVAALTDNKFQIRVFAAGEIVPGLQVVDAVQNETVECGHTASY
                     YYVGKDPTFAFDTAVPFGLNTRQHNAWVLQGGGLELMREFYKDYNMTSFLMSNTGAQM
                     GGWWRKEIKSPEDMKGVKMRIGGYAGQVMAKLGVIPQQLAGGDIYPALEKGTIDACEW
                     VGPYDDQKLGFNKVTQYYYYPGWWEGSAALSLYVGLKAWDALPALYKEAIASACADAN
                     TWSVSKYDVQNPKALRELVAGGTKFLPFPQSVMEASFNAANELYTETVAKNPKFKKVY
                     DSWKPFRSEEVLWFRVVENTFDNFMARQSANNKL"
     gene            3318..4424
                     /locus_tag="VF991_00600"
     CDS             3318..4424
                     /locus_tag="VF991_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9554958.1"
                     /translation="MQRRKFLRSAGIGGGAVVAAGTLAAPAIAQSMPELKWRLTSSFP
                     KSLDTLYGAGEALTKYVAEMTDNKFQMRIFAAGEIVPGLQVLDAVQNGTVEIGHTAGT
                     YYVGKDPTFAFDTAIPFGTNSRQQDAWMNWGGGRELMSELYKTYNVHGIVCGGTGAQM
                     GGWFRKEIKTIDDMKGLKFRIAGIAGLVVNRVGGVAQQIAGGDIYPALEKGTIDAAEW
                     VGPYDDQKLGFNKITQYYYYPGWWEGGPQPSVYVNLEKWNQLPKAYKAVIEAGCVRAK
                     EWMISKYDAENPKALRELVSSGTKLMPFPQPVMEACFNASNDIWAEISAKNPQFKKVY
                     DSWRPFRNEEILWFRVCENTFDTFMARMSAANKL"
     gene            4446..5540
                     /locus_tag="VF991_00605"
     CDS             4446..5540
                     /locus_tag="VF991_00605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9554959.1"
                     /translation="MQRRKFLTTAGVGAAATAVAAPALAQSMPEVKWRLTSSFPKSLD
                     TLWGGAELFSRRIGEITDGKFQIRIFAAGEIVPGLQVLDAVQNGTVEIGQTAAYYYVG
                     KDVTFTFDTAVPFGLNSRQHVAWWMFGGGRQLMDEFYKDYGVVGHLMGGTGAQMGGWY
                     RKEIKTTEDLRGLKFRVGGFAGQILTKLGVIPQQLAGGDIYPALEKGTIDAAEWVGPY
                     DDEKLGFNKIAPYYYYPGWWEGTGMGTAYINAKAWQSLPPIYQKAIEMAANEVTLWML
                     AKYDDGNPGALRRLVVGGTKLLPFPTAVLEACYNAAQETYAEISAKNPKFKKIYDQWK
                     PYRAEQILWSRVAEGGFDSFMARMHGAGKV"
     gene            5685..6788
                     /locus_tag="VF991_00610"
     CDS             5685..6788
                     /locus_tag="VF991_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9554960.1"
                     /translation="MKRRKFIKTAGVGAAGVAATTAVAAPAIAQSMPEVKWRLTSSFP
                     KSLDTLYGGSEVFAKMCGEMSDGKFQVRVFAAGEIVPGLQVADAVQNGTVEAGQTAAY
                     YYFGKHPNFVFETGLPFTMNQRQYYAWLYFGGGHELINEFYKEYNFRSFAFGGTGCQM
                     GGWFRKEIKTMEDMKGLKFRVGGFAGLILERLGVVPQQIAGGDIYPALEKGTIDACEW
                     VGPYDDEKLGFNKVAKYYYYPGWWEGASVGSIYINNAAWEKLPKQYQAMVETAAGLVT
                     AWMVPKYDAGNPAALRRLVASGTEFRPFPRAVLEPCFAEAYKYYDELAAKDPKFKKIY
                     DSLKAFRADQNLWFRVAENSFDNFNFSMSAQGR"
     gene            complement(6864..8456)
                     /locus_tag="VF991_00615"
     CDS             complement(6864..8456)
                     /locus_tag="VF991_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX9554961.1"
                     /translation="MIPLEWMPPFMFSGLVVFMIIGYPVAFSLAAVGFFFGFMSIEMG
                     YFTMAFMQAIPGRVFGSILSNELLLAIPFFTFMGAILEKCGLAEDMLESMGQLFGPVR
                     GGLGYSTIIVGFILGAITGTVAAQVIAMAMITLPVMLRYKYDMRYATGVLAASGTITQ
                     LVPPSLVLIVLADQLGRSVGDMYLGAWGPSLLQIALFAAYTFYLGIVKPDAMPPVPRT
                     LFGKPLLIKCAWGIIPAAVLIFLVLGTIMMGLATPTEAGAMGTIGAIVLAVVRNAPLT
                     RFDKWAFYGGCAAAIIGTLIATAGYFKSPPFTLAFTIMFASIIWLCWRAWQVKDLRDL
                     IVQAFQMTMRITAMVAFILVGATCFSITFQGVDGNRWVEHLMSNLPGGVWGFLVVVNL
                     FVFFLAFFLDFFEIAFIIVPMLAPVAQKILEPVVGHDAALIWFGVMLCVNVQTSFMHP
                     PFGFALFYLRSVAPKEVKSSDIYWGSIPWVILQLIMVVIVIALPQSVTYFLDAPSNVD
                     PSKIKIEIQAPPSEDSAPPIFK"
     gene            complement(8456..9001)
                     /locus_tag="VF991_00620"
     CDS             complement(8456..9001)
                     /locus_tag="VF991_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEX9554962.1"
                     /translation="MRLLLSFSALVDAFNEKIGVVCNWLVLLACIVSGGNAMVRYAYD
                     TSSNAWLEIQWYMFAVIVMFGAAYTLKRNEHVRVDLLYMTLSRRGQLWIDILGTLIFL
                     LPTCAILAWLSWPFFIQSFDVNEHSSNAGGLLRWPIKLVPPVGFALLALQGISELIKR
                     VAFLNDYPVDSLEAHYERPQQ"
     gene            complement(9175..>9615)
                     /locus_tag="VF991_00625"
     CDS             complement(9175..>9615)
                     /locus_tag="VF991_00625"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: protein motif:HMM:NF016277.4"
                     /note="Conjugates Arg from its aminoacyl-tRNA to the
                     N-termini of proteins containing an N-terminal aspartate
                     or glutamate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEX9554963.1"
                     /translation="AFETQPLATGEQYALFSRYVLARHHDGDMADMDFDEYRAMVEES
                     PVETAIIEFRDDSAEGRLVGACLVDWLSSGVSAVYSFFDPHDPRRGLGTHMILWLADA
                     AARRGLPYVYLGYWIADSSKMAYKRAFRPLEFFGPEGWMELPTA"
BASE COUNT         1869 a         3041 c         3111 g         1594 t
ORIGIN      
        1 tatctcaacc tcgaccggct gatcaagatc atccgcgagg aggacgagcc caagcccaag
       61 atgatcaagg ccttcaagct caccgacctg caggccgaag cgatcctcaa catgcgcctg
      121 cgcgcgctgc gccggctcga agagttcgag atcaagggcg agcacaagaa gctcaccgcc
      181 gagcgccgcg agctcaaggc gctgctcaag gacgaggatc gcaagtggca ggcgatcgcc
      241 gccgaggtcc aggagaccaa gcgcaagttc ggcggcaaga ccgagctcgg ccgccggcgc
      301 accgagctcg ccgacgcgcc ggccgaggtc gagcatgcgg tcgaggattt cgtcgagcgc
      361 gagccgatca ccgtggtgtg ctccgaaaag ggctggatcc gcgccgccaa gggccatctc
      421 gacgacaagg ccgcggccga actgaaatac aaggaaggcg acgggccgcg cttcgccgtc
      481 catgcccagt cgaccgacaa gatcctggtg ttcgccacca acggccgctt ctacacgctg
      541 ggctgcgaca agctgccgag cgcgcgcggc cacggcgagc cgatccggct gatgatcgag
      601 cttttgaacg agcaggacat cgtgcagctc gaagtgctga agggcggccg caagttcctg
      661 gtcgcctcgg acgccggccg cggcttcatc gtgccggaag acgaagtcgt ggcgcagacc
      721 aagaacggcc gacaggtcct gaatctggcc gaccgggaga aggcccagac cttcgcgatc
      781 gttcccgagg gtgcggactc cgtggcggcg ctgagcgaag gccgcaagct cctgatcttc
      841 ccgctcgagc aggttcccga aatgggccgc ggtcgcggcg tgctgctgca gaaatccaag
      901 gccgaccggc tgtccgatgc gcaggccttc cggctcgacg acggcctgcc gtggtccaac
      961 cgcgtcatcc ccgccagcga gctgaaattc tggcgcggcg agcgcgccca ggcgggccgc
     1021 atgcccgaaa aaggctggcc gcgcgccaag cgcttcaagg attgatcgaa tggacctgac
     1081 gctgctgtgg aagacggtgc tgatcggcat cgtcgagggc atcaccgagt tcctgcccgt
     1141 ctcctcgacc ggccacatca tcctggccga ggagctcctc cacttcgagg gatcgcccgg
     1201 caaggtcttc gagatcgtca tccagctcgg cgccatcctc gcggtatgcg ttctctaccg
     1261 cgtcaagatc tggaacaccg tgaccggcgt ggtgcggcgt gagcccatcg ccatgcactt
     1321 cgccgcggcc gtcatcgtcg ccttcctgcc ggccgccgtg gtcggcgtcg ccgcccacaa
     1381 atacgtcaag gcgatgctcg acagtccggc ggtcgtggcg gtcgcgctga tcgtcggcgg
     1441 ctttgccatc ctgatcatcg agcacttcgc gcagcgaccg cgcgtcaaat cggtcgacgc
     1501 catcgatctc aagacggcgc tgttcgtcgg cgtctgccag tgtctggcca tgatccccgg
     1561 cgtatcgcgc tcgggcgcca ccatcatggg cgcgcgggtt cttcgcgtgg accgtgcaac
     1621 tgccgccgaa ttttccttct tcctggccat tcccaccatg atcggcgcga cggtctacga
     1681 tctctacatg aactggtcga cgctcgactg gcagggcagc ggcttgatcg ccgtgggctt
     1741 cgtcacggcg ttcctttctg ccctgatcgt ggtcggcgcc ttcgtgcgct tcatcagccg
     1801 gcacggcttc ggcgttttcg cctggtaccg cattgcagcg ggcgccctgg cgctcgccct
     1861 attgctcatg cgttgaaaac cgcaaggctt tggaaagcct gccgaaaccg ccgcttgggc
     1921 ggggcttctt gtgggctgga aagacgcgcc caacgtcctt ttcatcgcca atacgctatg
     1981 ccataaaccg gccgccgccg cgcaggcggc tcgcgttgtc aacgcgttca aaaagcaaag
     2041 tctggaggga gttttctcga tgcaacgtcg caagttcctg cacactgccg gtgttggcgg
     2101 tgcagcggcc gtcacggcgg gcacgctcgc cgcgccggcc attgcccagt caatgcccga
     2161 gctcaagtgg cggctcgcct cgagcttccc caagtcgctc gacacgatct atggcgccgg
     2221 cgagtacttc gccaagcgtg tcgcggcgct gaccgacaac aagttccaga tccgcgtatt
     2281 cgcggccggt gagatcgttc ccggcctgca ggtcgtcgac gccgtccaga acgagacggt
     2341 cgaatgcggc cacaccgcct cctactacta cgtcggcaag gacccgacct tcgccttcga
     2401 cacggcggtg ccgttcggcc tgaacacgcg ccagcacaat gcctgggtcc tgcaaggcgg
     2461 cgggctcgag ctgatgcgcg agttctacaa ggactacaac atgacgtcct tcctgatgag
     2521 caacaccggc gcccagatgg gcggctggtg gcgcaaggag atcaagtcgc ccgaggacat
     2581 gaagggcgtg aagatgcgca tcggcggcta cgccggccag gtcatggcca agctcggcgt
     2641 gatcccccag cagcttgccg gcggcgacat ctatccggcg ctcgagaagg gcaccatcga
     2701 tgcctgcgaa tgggtcggcc cgtacgacga ccagaagctt ggcttcaaca aggtgacgca
     2761 gtactactac tatcccggct ggtgggaggg cagtgcagcg ctgtcgctct atgtcgggct
     2821 gaaggcgtgg gatgccctgc cggccttgta caaggaagcc atcgccagcg cctgcgccga
     2881 cgccaacacc tggtcggtgt ccaagtacga cgtccagaac ccgaaagcgc tgcgcgagct
     2941 ggtggcgggc ggcacgaagt tcctgccgtt cccgcagtcg gtgatggagg cgtcgttcaa
     3001 cgccgccaac gagctctata ccgagacggt ggccaagaac cccaagttca agaaggtcta
     3061 cgattcgtgg aagccgttcc gcagcgagga ggtcctgtgg ttccgcgtcg tcgagaacac
     3121 cttcgacaac ttcatggccc gccagtcggc gaacaacaag ctctgacggc cagaaccggc
     3181 cgtccggtgg aaaagccccg cttcggcggg gctttttctt tgccggatgc tttaccaggg
     3241 ccgaccttcc gtggcaggct gattccgccg agtggaatca acgctctgca aacaaaaaac
     3301 gtccgtggga ggacaccatg caacgtcgca agttcctgcg ctccgccggc atcggcggtg
     3361 gcgcagttgt cgctgccggc acgcttgccg cacccgcaat tgcccaatcg atgcccgagc
     3421 tcaaatggcg actgacgtcg agctttccca agtcgctcga tactctctac ggtgcgggcg
     3481 aggcgctgac gaagtacgtc gccgagatga ccgacaacaa gttccagatg cgcatctttg
     3541 cggcgggcga gatcgtgcct ggcctgcagg tgctcgacgc ggtgcagaac ggcaccgtgg
     3601 aaatcggtca caccgccggc acctactatg tcggcaagga tccgacgttc gccttcgata
     3661 ccgccattcc gttcggcacc aactcgcgcc agcaggacgc ctggatgaac tggggcggcg
     3721 gccgcgagct gatgagcgag ctctacaaga cctacaacgt ccacggcatc gtctgtggcg
     3781 gcacaggcgc ccagatgggc gggtggttcc gcaaggagat caagaccata gacgacatga
     3841 agggattgaa gttccgcatc gccggcatcg ccgggctggt ggtcaaccgt gtcggcggcg
     3901 tggcccagca gatcgccggc ggcgatatct atccggcgct cgaaaagggc acgatcgacg
     3961 cggccgaatg ggttggtccc tacgacgacc agaagctcgg tttcaacaag atcacgcaat
     4021 actactacta tcccggttgg tgggagggcg gcccacagcc gtccgtctac gtcaatctgg
     4081 agaaatggaa ccagctgccc aaggcctaca aggccgtgat cgaggcaggt tgtgtccggg
     4141 cgaaggaatg gatgatctcc aagtacgacg ccgaaaatcc caaagcgttg cgcgagctgg
     4201 tatcttcggg caccaagctg atgcccttcc cgcagccggt aatggaggcg tgcttcaacg
     4261 cctccaacga catctgggct gaaatctcgg caaagaaccc gcagttcaag aaggtctatg
     4321 actcgtggcg gccgttccgc aacgaggaga tcctgtggtt ccgcgtctgc gagaacacct
     4381 tcgacacctt catggcccgc atgtcggcgg ccaacaaact atagaaacca attgaggggg
     4441 acatcatgca acgtcgcaaa ttcctgacaa ccgccggcgt cggcgcggct gccacggcgg
     4501 tcgccgcacc ggcgctcgcg caaagcatgc cggaagtgaa atggcgtctg acgtcgagct
     4561 ttcccaagtc gctcgatacg ctgtggggcg gcgccgagct gttcagtcgg cggatcggcg
     4621 agatcaccga cggcaagttc cagatccgca tcttcgccgc gggcgagatc gtgcccggct
     4681 tgcaggtcct cgacgcggtg cagaatggca ccgtcgagat cggccagacc gccgcctact
     4741 actatgtcgg caaggacgtc accttcacct tcgacaccgc cgtgccgttc ggcctcaaca
     4801 gccgccagca cgtggcgtgg tggatgtttg gcggtggccg ccagctgatg gacgagttct
     4861 acaaggacta cggcgtggtc ggtcacttga tgggcggcac cggcgcgcag atgggcggct
     4921 ggtaccgcaa ggagatcaag acgaccgagg atctcagggg attgaagttt cgcgtcggcg
     4981 gcttcgccgg ccagatcctg accaagcttg gcgtgatccc ccagcagctt gccggcggcg
     5041 acatctatcc ggcgctcgag aagggcacca tcgatgccgc cgagtgggtc ggcccgtacg
     5101 acgacgagaa gctcggcttc aacaagatcg cgccctacta ctactatccc ggttggtggg
     5161 aaggcaccgg catgggcacc gcctacatca acgccaaagc ctggcagtca ctgccgccga
     5221 tctaccagaa ggccatcgag atggccgcca acgaggtcac gttgtggatg ctggcgaagt
     5281 atgacgatgg caacccgggt gcgctgcgcc gtctggtggt aggcgggacc aagctgctgc
     5341 cgttcccgac cgcggtgctc gaggcttgct acaatgcggc gcaggaaacc tacgccgaga
     5401 tctcggccaa gaatcccaag ttcaagaaga tctacgatca atggaagccc tatcgcgccg
     5461 agcagatcct gtggtcgcgc gtcgccgaag gcggcttcga cagcttcatg gcccgcatgc
     5521 acggcgccgg aaaggtctga tcggcggtgt ggaatcggat ggggaccccg cttcggcggg
     5581 gtctcttttt tgccgcgtcg gcggcttttc aaagccaatt ctgcatgtca gtgtccggcc
     5641 gctaacgggg gccgtgtggg cgtccgtagg gaggacacag agagatgaag cgtagaaaat
     5701 tcattaaaac cgcgggcgtg ggtgccgcgg gtgttgccgc cacgacggcc gtcgcggcgc
     5761 cggccattgc gcagagcatg ccggaagtga aatggcgtct gacgtcgagc ttccccaagt
     5821 cgctcgacac gctctatggc ggctccgagg tgttcgccaa gatgtgcggt gagatgtccg
     5881 acggcaagtt ccaggtccgc gtcttcgccg ccggcgagat cgtcccgggc ctgcaggtcg
     5941 ccgatgctgt gcagaacggc accgtcgagg cggggcagac cgcggcctac tactacttcg
     6001 gcaagcatcc gaacttcgtg ttcgagaccg gcctgccgtt caccatgaac cagcgccaat
     6061 actacgcttg gctctatttc ggcggcggcc acgagctgat caacgagttc tacaaggagt
     6121 acaacttccg ctccttcgcc ttcggcggca cggggtgcca gatgggtggc tggttccgca
     6181 aagagatcaa gacgatggag gacatgaagg gcctgaagtt ccgcgtcggc ggcttcgccg
     6241 gcctgatcct cgagcggctc ggcgtcgtgc cgcagcagat cgccggcggc gacatctatc
     6301 cggcactgga aaagggcacg atcgacgcct gcgagtgggt cggtccgtac gacgacgaga
     6361 agctcggctt caacaaggtt gccaagtact actactatcc cggctggtgg gaaggcgcct
     6421 cggtcggctc gatctacatc aacaatgccg cctgggagaa gctgcccaag cagtaccagg
     6481 cgatggtcga gaccgcggcc ggccttgtca ccgcctggat ggtgccgaag tacgatgccg
     6541 gcaacccggc ggcgctgcgc cgcctggtgg cgtcgggcac cgagttcagg ccgttcccgc
     6601 gcgccgtgct cgagccctgc ttcgccgagg cctacaagta ctacgatgag ctggcggcca
     6661 aggatccgaa gttcaagaag atctacgaca gcctgaaggc gttccgcgcc gaccagaacc
     6721 tgtggttccg cgtcgctgag aactctttcg acaacttcaa cttctcgatg tcggctcaag
     6781 gtcgctagac gacatcgatc gtaaacaaga agccccgccg gaaacggcgg ggctttttgc
     6841 tgggcgctcc gtatgaaagg accttacttg aagatcggcg gcgcggagtc ctcgcttggc
     6901 ggcgcctgga tctcgatctt gatcttgctc gggtcgacat tgctcggcgc atcgaggaag
     6961 taggtcaccg actgcggcaa ggcgatcacg atcaccacca tgatcagctg caggatcacc
     7021 cacgggatcg agccccagta gatgtccgag cttttcacct ccttgggcgc cacgctgcgc
     7081 aggtagaaga gggcgaagcc gaacggcgga tgcatgaacg aggtctgcac gttgacgcac
     7141 agcatgacgc cgaaccagat cagcgccgca tcgtggccga ccaccggctc gaggatcttc
     7201 tgcgccaccg gcgccagcat cggcacgatg atgaaggcga tctcgaagaa gtcgaggaag
     7261 aaggccagga agaagacgaa caggttgacg acgaccagga agccccagac gccgcccggc
     7321 aggttcgaca tcaggtgctc gacccaccgg ttgccgtcga cgccctggaa ggtgatcgaa
     7381 aaacaggtcg cgccgaccag gatgaaggcc accatcgcgg tgatgcgcat cgtcatctgg
     7441 aaggcctgga cgatgaggtc gcgcaggtcc ttgacctgcc aggcgcgcca gcacagccag
     7501 atgatcgagg cgaacatgat ggtgaaagcg agcgtgaacg gcggcgactt gaagtagccg
     7561 gcggtcgcga tcagggtgcc gatgatcgcc gcggcgcagc caccgtagaa ggcccacttg
     7621 tcgaaacgcg tgagcggcgc attgcgcacc acggccagca cgatggcgcc gatggtgccc
     7681 atggcgccgg cttcggtcgg cgtcgccagg cccatcatga tcgtgccgag caccaggaag
     7741 atcagcaccg cggccggaat gatgccccag gcgcatttga tcagcagcgg cttgccgaac
     7801 agggtgcgcg gcaccggcgg catggcgtcc ggcttcacga tgccgaggta gaaggtgtag
     7861 gcggcgaaca gcgcgatctg caggagcgac ggcccccagg cgccgagata catgtcgccg
     7921 accgagcggc cgagctggtc ggccagcacg atcagcacca gcgacggcgg caccagctgg
     7981 gtgatggtgc ccgaggccgc cagcacgccg gtggcgtagc gcatgtcgta cttgtagcgc
     8041 agcatcaccg gcagggtgat catcgccatg gcgatgacct gtgccgccac ggtgccggtg
     8101 atggcgccca ggatgaagcc gacgatgatc gtcgaatagc cgagcccgcc cctgaccggg
     8161 ccgaaaagct ggcccatcga ttcgagcatg tcctcggcca ggccacattt ctccaggatc
     8221 gcgcccatga aggtgaagaa cgggatggcc agcagcaatt cgttggacag gatggagccg
     8281 aacacgcggc ccgggatggc ctgcatgaag gccatcgtga agtaacccat ctcgatcgac
     8341 atgaagccga agaagaagcc gaccgcggcc agcgagaacg ccaccggata gccgatgatc
     8401 atgaagacca cgaggccgct gaacatgaag ggcggcatcc actcgagagg gataatcatt
     8461 gctgcggcct ctcgtagtgc gcttcgaggc tgtcgaccgg atagtcgttg aggaaggcca
     8521 cgcgcttgat cagttcggaa atgccctgca gcgccagcag cgcgaagccg accggcggca
     8581 ccagcttgat cggccagcgt aagaggccgc cggcgttcga ggaatgctcg ttgacgtcga
     8641 aggactggat gaagaacggc cagctcagcc acgccaggat ggcgcaggtc ggcagcagga
     8701 agatcagcgt ccccaggata tcgatccaca gctggccgcg ccggctcagc gtcatgtaca
     8761 acaggtcgac gcgcacatgc tcgttacgct tcagcgtgta ggcggcgccg aacatgacga
     8821 tcaccgcgaa catgtaccat tggatttcca gccaggcgtt cgagctggtg tcgtaggcat
     8881 agcggaccat ggcgttgccg ccgctgacga tgcaggcgag cagcaccagc cagttgcaga
     8941 ccaccccgat cttttcgtta aaagcgtcga cgagcgcgct gaaggacagc aagaggcgca
     9001 tccatctccc ccgtgcgagt tcttgttgtc ggacccccgt cctcgccaac agggcgcttc
     9061 ctcataacgc ggcgtgcgaa accacgctag cgttgaaact gtcccggccg aggcgggggt
     9121 gcgtcaagtc gctccacccc agcgcggggg ttaccccgcg cgattcgcgg ctgcctaggc
     9181 ggtgggcagt tccatccacc cttcggggcc gaagaattcc aacggccgga aggcgcgctt
     9241 gtaggccatc ttgctcgagt cggcgatcca gtagccgaga tagacatagg gcaggccgcg
     9301 gcgggccgcc gcgtcggcca gccagaggat catatgggtg cccaatccgc gccgcgggtc
     9361 gtgcggatcg aagaagctat agaccgccga aacgccgctc gacagccagt cgaccaggca
     9421 ggcgccgacc aggcggcctt cggccgagtc gtcgcggaat tcgatgatgg ccgtctcgac
     9481 cggactctcc tcgaccatgg cccggtattc gtcgaaatcc atgtcggcca tgtcgccgtc
     9541 gtggtggcgg gccagcacgt agcgcgagaa cagcgcgtat tgctcgccgg tggccagcgg
     9601 ctgggtctcg aaggc
//
LOCUS       DASWGA010000032         2059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1902487, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000032 DASWGA010000000
VERSION     DASWGA010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1902487"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VF991_00630"
     CDS             complement(<1..454)
                     /locus_tag="VF991_00630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554964.1"
                     /translation="MKIIDAQIHIWSQTVVPPSGLHRKVSKFTAEQALKEMDEAGVDA
                     ALIHPPYSWDPTSNQLAIEAAKKYPDRFAVMGQFPLDDPESRQRIHGWRNQPGMMGLR
                     WALLYPDQQKALHEGKLDWVWPAAEKEGIPVATMAGLFLPTFRKIAEAH"
     gene            562..1062
                     /locus_tag="VF991_00635"
     CDS             562..1062
                     /locus_tag="VF991_00635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554965.1"
                     /translation="MTAAAPVTAQPIPAATPEGIFCTGTYAATGRVLAAVTGCRNENQ
                     GCSSDYFLDLKVEITEVIGARSPTPSYPVGRSLHRGDILPIRIRPFASLVITAVPPPP
                     RPPLSDPQIRDTFVNKEFVFSVVIMDHDVKDHPAFPANIWPISEKAWALDTMISDPTG
                     NCPRRL"
     gene            complement(1066..2034)
                     /locus_tag="VF991_00640"
     CDS             complement(1066..2034)
                     /locus_tag="VF991_00640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9554966.1"
                     /translation="MGGAPIGGFRANISDAEAVALTDAGYDEGVRYFDTSPFYGYGRS
                     ELRIGAALREKPRDSYVLSTKIGRILHAMKPGEKPPADFRDGGLPGFAPVFDYTYDGV
                     MRSLEHSHHRLGIARIDIVLIHDVDFWTIKDRAILDQRFKTVMDSGFRALDELRKAGV
                     IGAIGVGINEADTSLRFIQAGDFDCMLLAGRYTLLEQGALDAFLPECEKRRVSVILGG
                     PYNSGILAGPVKPGATHDYVAAPSTLIEKAQKIEAVCKRHGVELGAAAMQFPLAHPAL
                     CSVIPGALSVAEVEQNVTRIGAKIPADLWAELKREKLLEPAAPVPQ"
BASE COUNT          331 a          671 c          661 g          396 t
ORIGIN      
        1 gatgcgcttc ggcgattttc ctgaacgtcg gcaggaacag gccggccatg gtggcgaccg
       61 ggatgccttc cttttcggcg gcgggccaca cccagtcgag cttgccctcg tgcagcgcct
      121 tctgctggtc gggatagagc aacgcccagc gcaggcccat catgccgggc tggttgcgcc
      181 aaccgtggat gcgctggcgg ctctctggat cgtccaacgg gaactgcccc atcacggcga
      241 agcggtcggg atatttcttg gccgcttcga tcgcgagctg gttggaggtc ggatcccagc
      301 tatagggcgg atggatcagg gcggcgtcga cgcccgcctc gtccatctcc ttcagcgcct
      361 gctcggcggt gaacttcgac accttgcggt gcaggccgga gggcggcacc acggtctgcg
      421 accagatatg gatctgcgcg tcgatgattt tcatggcgtt ctccctattt cgtccctgcg
      481 attgtagact gatccaaagg ccggccggag tttcagatgc gcatgaaacg actgcgattt
      541 gtgccttgcc tggtgtccgc cgtgactgca gcagccccgg tcaccgccca acccataccg
      601 gcagccacgc cggaggggat cttttgcacc ggcacatatg ccgcgactgg tcgtgtgctc
      661 gccgccgtga ccgggtgccg aaacgaaaac cagggctgtt cctccgacta cttccttgat
      721 ctcaaggtcg agatcaccga ggtcatcggc gcaagaagtc cgaccccttc ttatccggta
      781 ggccgaagct tgcaccgggg cgatatcctg ccgattcgca tccgcccctt cgccagcctt
      841 gtcattacgg ccgttcctcc tccgcccagg cccccgctct ccgatccgca gattcgcgat
      901 acctttgtga acaaggagtt cgtcttttcc gtcgtgatca tggaccatga cgtcaaggac
      961 cacccggcct tcccggccaa tatctggccg atatccgaga aggcctgggc gctcgacacg
     1021 atgatcagcg acccgaccgg caattgtccc aggcggttgt gacgtctact gcggcaccgg
     1081 cgccgcaggt tcgagcagct tttcgcgctt gagctcggcc cacaggtcgg ccgggatttt
     1141 tgctccaatc cgcgtcacgt tctgctcgac ctcggcgacg ctgagcgccc cggggatcac
     1201 cgagcacaag gcgggatgcg ccagcgggaa ctgcatggcc gcggccccga gctccacgcc
     1261 atggcgcttg cacaccgctt cgatcttctg cgccttttcg atcagcgtcg agggtgcggc
     1321 cacatagtcg tgggtggcgc cgggcttcac aggaccggcc aggatgccgg aattgtacgg
     1381 cccgcccagg atcaccgaga cgcggcgctt ctcgcactcc ggcaggaatg cgtcgagcgc
     1441 gccctgttcg agcagggtgt agcggcccgc cagcagcatg cagtcgaagt cgccggcctg
     1501 gatgaagcgc aggctggtgt cggcctcgtt gatgccgacg ccaatggcgc cgatgacgcc
     1561 cgccttgcgc agctcgtcga gcgctctgaa acccgagtcc atcaccgtct tgaagcgctg
     1621 gtcgagaatg gcgcggtcct tgatggtcca gaaatcgacg tcgtggatca gcacgatgtc
     1681 gatgcgcgca atgccgagcc tgtggtgcga gtgctccaac gagcgcatga cgccgtcgta
     1741 ggtgtagtcg aacaccggcg cgaagcccgg caggccgccg tcgcggaagt cggccggcgg
     1801 tttctcgccg ggcttcatgg cgtgcaggat gcggccgatc ttggtcgaca ggacgtagct
     1861 gtcgcgcggc ttttcgcgca gcgccgcgcc tatgcgcagc tcgctgcggc catagccgta
     1921 gaagggtgag gtgtcgaaat agcggacgcc ttcgtcgtag cccgcgtcgg tgagcgccac
     1981 cgcctcggcg tcggaaatgt tggcgcggaa gccgcctatc ggtgcgccgc ccaggccgag
     2041 ttcagtgact ttgagtttg
//
LOCUS       DASWGA010000033         2902 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_3076, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000033 DASWGA010000000
VERSION     DASWGA010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2902
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3076"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..1007)
                     /locus_tag="VF991_00645"
     CDS             complement(join(65..662,661..1007))
                     /locus_tag="VF991_00645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011970797.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEX9554967.1"
                     /translation="MARAYSLDLRERVVGAVSAGASCRTVARTFKVSVASVVKWSQRF
                     RASGSPAARPVGGKRPYALAGEREWLLGRLAEQPDITLRALLAELQARGIQVSYYAVW
                     HFFEHEGISFKKKPLHASEQDRPDVARRRAQWKKYQGRIDPARLVFIDETWAKTNMTR
                     THGRAPRGTRLIAKAPHGRWRTLTFLAALRRDRIDAPCVIDGPINGQSFLAYVEQFLV
                     PTLKPGDIVIFDNLGSHKGKAVRRAIRAAGAKLFFLPPYSPDLNPIEQAFAKLKTLLR
                     KAAERTVDATWKRIGALLPAFSPQECANYFANSGYASA"
     gene            1230..1400
                     /locus_tag="VF991_00650"
     CDS             1230..1400
                     /locus_tag="VF991_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015474 - autotransporter activity
                     [Evidence IEA];
                     GO_process: GO:0046819 - protein secretion by the type V
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEX9554968.1"
                     /translation="MPFTTYGIAAQRDGVVIGLSANTAVADAASLYLRYEGNISGQDS
                     THALTAGVRMTW"
     gene            complement(1407..1841)
                     /locus_tag="VF991_00655"
     CDS             complement(1407..1841)
                     /locus_tag="VF991_00655"
                     /inference="COORDINATES: protein motif:HMM:NF018482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEX9554969.1"
                     /translation="MSSPATAQDVPAAWRVECVGDGKTLDCRAIQQMINREDKQLVAQ
                     LSARVAADTKAAVLLIQLPLGISLTEPVQLKVDNGAVERQPVQTCTNVGCIVSVPLKD
                     PLLAAMRSGTTLKMSFQDTNKRTITIDVPLLGFGLAFDKAKS"
     gene            complement(1969..>2902)
                     /gene="ugpC"
                     /locus_tag="VF991_00660"
     CDS             complement(1969..>2902)
                     /gene="ugpC"
                     /locus_tag="VF991_00660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008548509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX9554970.1"
                     /translation="ERITGGQVAIGERVVNELEPKDRDIAMVFQNYALYPHMSVYDNM
                     AYGLKIRGMSKDEIERRVQKAAKTLELGTFLLRRPRQLSGGQRQRVAMGRAIVREPAV
                     FLFDEPLSNLDAKLRVQMRLEIKRLQRELAVTSIYVTHDQVEAMTLADRLIVMNAGVA
                     DQIGTPMDVYDQPASVFVAGFIGSPSMNFLAGKVAGDGRSIDLAGTGATRVTLPLGRA
                     TSAAAGTPVALGIRPEHLHPAADGSLEFEIELAEPLGADTLLHGRFGEARELVTVRQG
                     GHIRAQPGEKRHFKADPGYLHLFDSQTGRRIADA"
BASE COUNT          480 a          960 c          972 g          490 t
ORIGIN      
        1 tcatgatcat gagcgggcgg gacgcccgcg gtccggaaga cgatgacctt agagcacgat
       61 agctttaggc cgaagcatat cctgagttgg cgaagtagtt ggcgcactcc tgtggcgaga
      121 aggccgggag caaggcgccg atgcgtttcc aggtagcatc gacggttcgc tcggcggcct
      181 ttcggagcag ggtcttgagc ttggcgaagg cctgctcgat gggattgaga tcggggctgt
      241 agggcggcag gaagaagagc ttggcgccag cggcgcggat ggctcggcgc acggccttgc
      301 ctttgtgact gccgagattg tcgaagatga cgatgtcgcc cggcttgagg gtgggcacga
      361 ggaactgctc gacgtaggcc aggaagcttt ggccattgat cggtccatcg atgacgcaag
      421 gggcatcgat gcgatcgcgg cgcagggcgg cgagaaaggt cagcgtgcgc cagcgcccgt
      481 ggggagcctt ggcgatcagc cgggtgcccc gcggagcgcg cccgtgggtg cgcgtcatat
      541 tggtcttggc ccaggtctcg tcgatgaaga ccagccgagc ggggtcaatc ctgccctgat
      601 acttcttcca ctgagcccgt cgccgggcga cgtcggggcg atcctgctcg ctggcgtgca
      661 ggcttttttt tgaagctgat gccctcatgc tcgaagaagt gccagaccgc gtagtagctg
      721 acctggatgc cgcgcgcctg gagctccgcc agcagcgccc gcaaggtgat atcaggctgc
      781 tcggccagcc ggcccagcaa ccactcccgc tcgccggcca atgcataggg ccgcttgccg
      841 cccaccggcc gcgccgccgg acttccgctg gcgcggaacc gctgcgacca tttcaccacg
      901 ctggcgacgc taaccttgaa ggtcctggcc acagtccggc aactcgcgcc cgccgacacc
      961 gcgccaacca cccgctcacg gagatccagg gaatacgctc gggccatcga tgctggcctc
     1021 caatccagcc agcatcttga atcagaatcc cagccccttg ggaatcccct ttcgattcag
     1081 gataaacaga tcatgctcta gaacggcttc agcgagttcg gcgcgcagtc gctcaacctc
     1141 acggtcgcag cccagaccac gaactcgctg cgcaccgtgc tgggcgcacg gcgcggccgg
     1201 tatcggccat cctcgccggc gcgccgaccg tgcccttcac gacctacggc atcgccgcgc
     1261 agcgcgacgg cgtcgtcatc gggctgtcgg ccaacaccgc cgtcgccgac gcggccagcc
     1321 tctatctccg ctacgagggc aacatctccg gacaggactc aacccacgcc ctcaccgccg
     1381 gcgtgcgcat gacctggtga gcgcgcttac gacttggcct tgtcaaaagc gaggccgaag
     1441 cccagcagcg gtacgtcgat ggtgatcgtc cgcttgttgg tgtcctggaa cgacatcttg
     1501 agcgtggtgc cgctgcgcat cgccgccagc agggggtcct tcaagggcac gctcacgatg
     1561 cagccgacat tggtgcaggt ctgcaccggc tgacgctcga cggcgccatt gtcgaccttg
     1621 agctggaccg gctccgtcag gctgatgccg agcggcagct ggatcaacag gaccgccgcc
     1681 ttggtatcgg cggcaacacg ggcggagagc tgcgcgacga gctgcttgtc ctcgcgattg
     1741 atcatctgct ggatggcccg gcagtcgagc gtcttgccat cgccgacaca ttcgacgcgc
     1801 caggccgcgg ggacgtcctg agcggtcgcg ggggacgaca agccggatac tgtgcaggcc
     1861 atccccaggg ccaaggccgc taatcggccg aagacgaaat cgtcggacgt cattctccaa
     1921 ctgtgcctga aattcgccgg gtcgtcgaag gctgggccaa agcctttctc acgcgtcggc
     1981 gattcgccgc ccggtctgcg aatcgaatag gtgcagatag cccgggtcgg ccttgaaatg
     2041 gcgcttttcc ccgggctggg ccctgatgtg gccgccttgg cgcaccgtca ccagttcccg
     2101 cgcctcgccg aagcggccat gcagaagggt atcggcgccg agcggctcgg ccagctcgat
     2161 ctcgaactcg agcgacccgt cggcggcggg atgcagatgc tcgggccgga tgcccagcgc
     2221 gaccggcgtg ccggccgccg ccgaggttgc ccggccaagc ggcagggtga cgcgcgtggc
     2281 gccggttccg gcgagatcga tcgagcggcc atcgcccgcc accttgccgg cgaggaagtt
     2341 catcgacggc gagccgatga agcccgccac gaacaccgag gccggctggt cgtagacgtc
     2401 catcggcgtg ccgatctggt cggcgacgcc tgcgttcatg acgatcaacc ggtcggccag
     2461 cgtcatcgcc tcgacctggt cgtgcgtgac gtagatcgag gtgacggcca gctcgcgctg
     2521 cagccgcttg atctccagac gcatctgcac gcgcagcttg gcgtcgaggt tgctgagcgg
     2581 ctcgtcgaac aggaacaccg cgggctcgcg cacgatggcg cggcccatgg cgacgcgctg
     2641 gcgctggccg cccgagagct ggcgcggccg gcgcagcagg aaagtcccga gttcaagggt
     2701 cttggccgcc ttctgcacgc gccgctcgat ctcgtccttg gacatgccgc ggatcttcag
     2761 gccgtacgcc atgttgtcgt agacgctcat gtgcggatag agcgcgtagt tctggaacac
     2821 catggcgatg tcgcggtcct tgggttcgag ctcgttgacc acgcgctcgc cgatcgccac
     2881 ttggccgccg gtgatgcgct cc
//
LOCUS       DASWGA010000034         6104 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1396557, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000034 DASWGA010000000
VERSION     DASWGA010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6104
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1396557"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1052)
                     /locus_tag="VF991_00665"
     CDS             complement(<1..1052)
                     /locus_tag="VF991_00665"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9554971.1"
                     /translation="MAVLKFGVALSFQVHRGLDEPWDKAYREGIELAGEANRLGFDSI
                     WASEHHGEADGYCPSPIVACAALAVAAPNCRIGQAVALAPLHGHPLRLAEDLSVLDNL
                     SGGRVEIGLGQGYRPAEFEMFGWPYARRTTAFEESLDILGLAWRGERFDYEGRIYKVK
                     GGLLRPPPVTPGPLPLWIGAAAPLARARAVRHRAGLLVAPLIELEHLVRQIRSFDDEA
                     QRQDAGRLPHALMREILVGDSAADAIKRHQPYLDHVYRVQYAPERTGQTYIDPATGER
                     KPLTADNPHYMSEAFMQDRWFLGTPADIAAKMVSWLPRLALDHFIFQARQPGMSLCHA
                     VSDLEAIAKGVMPVVRA"
     gene            complement(1056..1910)
                     /locus_tag="VF991_00670"
     CDS             complement(1056..1910)
                     /locus_tag="VF991_00670"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX9554972.1"
                     /translation="MKIGAVMFFTTDSMQPGPLGRALEERGFESLWVPEHTHIPSTRK
                     TPYPGGGPLIRPYYDIMDPFLVLNSAAAATTRLKVGTGIALLTQRDPIVTAKLVSTID
                     HLSNGRFLFGVGNGWNRDEIENHGTAFDSRHKLARERIEAMKTIWTQDEPEYHGEFVN
                     FDKMKQWPKPKQEPHPPIIVGGAFPYAARRAIRYGDGWIPRADRLEQNGVGVVIEQFR
                     KMAADAGRDPATLPISIFRVPDEIDRLRFCEKIGIDRVVFTLPAEKEDKLLPIMDRWA
                     ELKRQLAS"
     gene            2029..3306
                     /locus_tag="VF991_00675"
     CDS             2029..3306
                     /locus_tag="VF991_00675"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX9554973.1"
                     /translation="MTAKTLLLGIAIGLATALAAAVAVSWHPAIPPIPGASPESFDPA
                     IVARGESLAHIGNCVGCHTARGGRPFAGGRSLQTPFGTVFATNITPDPETGIARWSRE
                     AFRRALREGVAQNGEHLYPAFPYDHFTKASDADIDALYAFVMTRTPVQARPPANQLKP
                     PFGFRPLVAAWNLLFLDKGPLADDPNQPAEWNRGRALAEGLAHCGGCHTPRNPLGAER
                     RDHAYDGAWTEGWYAPPLNANSPAVRPWTADELFAYLRTGLSSTHAAAAGPMGRVTRA
                     LAQAREDEVRAIAVYVASLMAHAPAAQGAPPADKGTVADASHPEAAVLFAGACAVCHE
                     AGAPMMQEGRPPLAWGTPLHEDTPNDTIQIIVHGLAPPAGRSGPAMPAYGESFSDRQL
                     GDIVAYLRARYTDKPPWPDIPRAVAEARKEGDE"
     gene            3303..3794
                     /locus_tag="VF991_00680"
     CDS             3303..3794
                     /locus_tag="VF991_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007756242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9554974.1"
                     /translation="MISLDVNGATHQVEADPDTPLLYVLRNDLKLNGAKFGCGLGQCG
                     ACTVLVDDKPAFSCLLPIAALAGRKVRTIESLGTQERLGELPAAFEAEQAAQCGYCIA
                     GMIMRAQALLERNNRPTDSELRAHMAPNLCRCGTHMRILRAVRRAAAAMGGGVRDDPE
                     RTL"
     gene            3791..6004
                     /locus_tag="VF991_00685"
     CDS             3791..6004
                     /locus_tag="VF991_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006316117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9554975.1"
                     /translation="MSGLSRRSLLGNGALVVAFSLSRRAVAQDPGKKPALPGDLEKFP
                     LLDSWIRIAADGRITVFTGKAELGQGLKTALIQIAADELAVPAASIELITADTARTPD
                     EGITAGSRSMSDSGTAILNAAANVRLLLAETAAWRLLTEVDKIELRDGAAHAPNGESL
                     GYGELAAMLSLHVAAKPDVGRREAGVGVIGTNLARVDIPAKLSGGAAYLQDMRLPGMV
                     HARVVRGPSDGTRLKPGDIDAVAKMPGVVRVVRDGGFTAVLAGQEWQAVKALRRLQAA
                     GWERAGAPLPAEDMREAIRRLPAQDVPIFDTPGPPSPADGQVVKARYSRPCLMHGAIG
                     PSCALALWQNEGVTVWTHSQGVYPLRKALAELLRLPADKVRCIHVEGSGCYGHNGADD
                     VAADAALAARAVPGRPVRVQWMREQEHGWEPLGSAMVVELQATLGADGRIAEWRHDVW
                     SNAHNNRPATAGGLLAGAELDPPFPRQVPKPIPMPEGGGHRNGNPLYALANAKGVYHF
                     IEQAPVRVSALRSLGAHMNVFAIECFMDELATASGADPVAFRLAHMSDGRAREVMQAA
                     ADRFGWAQRTKGGNDRGCGFAFARYKNLAAYCAVAMEIAVDRDSGKIEIPRVVATVDS
                     GEAVNPDGIRNQIEGAILQSLSWTIHEAVAFDTAHRSSFDWSAYPILRFDAVPAVVEV
                     QVIDRPRQPFLGTGEAGQGPAAAALANAVADALALRVRDMPLAPEKLRSATPKSG"
BASE COUNT          942 a         2114 c         2113 g          935 t
ORIGIN      
        1 gcgcgaacga cgggcatgac gcctttggcg atggcttcga gatcgctcac cgcgtgacac
       61 aacgacatgc cgggctggcg cgcctggaag atgaagtggt cgagcgccag gcgcggcagc
      121 caggaaacca tcttcgccgc gatgtcggca ggcgttccga ggaaccagcg gtcctgcatg
      181 aaagcctcgg acatgtaatg aggattgtcg gcggtgagcg gcttgcgttc gccggtcgcc
      241 ggatcgatgt aggtctggcc cgtgcgttcc ggcgcatatt gcacgcggta gacgtggtcg
      301 aggtagggtt ggtgccgctt gatcgcgtcg gctgccgaat cgccgacgag aatctcgcgc
      361 atcagcgcat gcggcaagcg gccggcatcc tggcgctgag cctcgtcgtc gaacgagcgg
      421 atctggcgca ccagatgctc gagctcgatc agcggcgcga ccagcagacc ggcgcgatga
      481 cgcacggcgc gcgcgcgggc caacggggcg gcggcgccga tccacagcgg cagcgggccg
      541 ggcgtgaccg gcggcggacg cagcagcccg cctttcacct tgtatatgcg tccctcatag
      601 tcgaagcgct cgccgcgcca ggcaagaccg aggatgtcca gcgactcctc gaaggcggtc
      661 gtgcgccggg catagggcca gccgaacatc tcgaattcgg cggggcgata accctgccca
      721 agaccgatct cgacccggcc gcccgagaga ttgtcgagca ccgacagatc ctcggcgaga
      781 cgcaacggat ggccgtgcaa cggcgccagc gcgacggcct ggccgatgcg gcagttgggc
      841 gccgcgactg cgagggccgc acaggcgacg atgggcgacg gacagtagcc gtcggcctcg
      901 ccgtgatgct cgctcgccca gatcgagtcg aagccgagcc ggttcgcttc gcccgcgagc
      961 tcgatgcctt cgcggtacgc cttgtcccag ggctcgtcca gcccgcgatg gacctggaag
     1021 ctcagcgcca cgccgaactt cagcaccgcc atggctcagc tcgccagctg acgcttcagc
     1081 tcggcccagc ggtccatgat cggtaaaagc ttgtcttcct tctccgccgg cagggtgaag
     1141 acgacgcggt cgataccgat cttctcgcag aagcgcaggc ggtcgatctc gtccggcacc
     1201 cggaagatgc tgatcggcag ggtggcggga tcgcgcccgg cgtcggccgc catcttgcgg
     1261 aactgctcga tgacgacgcc cacgccattc tgttccagcc ggtcggcgcg ggggatccag
     1321 ccgtcgccgt agcggatcgc gcgtcgcgcg gcgtagggga aggcgccgcc gacgatgatc
     1381 ggcggatgcg gctcctgctt gggcttcggc cactgcttca tcttgtcgaa attgacgaat
     1441 tcgccgtggt actccggctc gtcctgggtc cagatcgtct tcatcgcctc gatgcgttcg
     1501 cgcgccagct tgtggcggct gtcgaaggca gtgccgtggt tctcgatctc gtcgcggttc
     1561 cagccgttgc cgacgccgaa caggaagcgg ccgttggaca gatggtcgat cgtggagacg
     1621 agcttggcgg tgacgatggg atcgcgctgg gtgagcaagg cgatgccggt gccgaccttg
     1681 agcctggtcg tcgccgcggc ggcgctgttc agcaccagga acggatccat gatgtcgtag
     1741 tagggccgga tcaacggccc gccgcccggg tagggcgtct tgcgggtcga ggggatgtgg
     1801 gtgtgctccg gcacccacag cgattcgaag ccgcgttcct ccagcgcgcg cccgagcggg
     1861 cctggctgca tggagtctgt ggtaaagaac atcacggcgc cgattttcat ggttggatct
     1921 ccctcgggcc ggattgtgcg ccgctcggag gtgcgggcgt caagccgctc ggccgatccg
     1981 cgaaaccgaa acccggctcg gccgttgtcg tgccaaggga cctttcattt gacggcaaag
     2041 acgctcctgc tggggatcgc catagggctc gcgacggctt tagcggccgc cgtcgccgtg
     2101 agttggcatc cggccatccc cccgattccc ggcgcctcgc cggagagctt cgatccggcg
     2161 atcgtggcgc ggggcgaaag cctcgcccac atcggcaact gcgtcggctg ccataccgcc
     2221 cgaggcggcc ggccgtttgc cggtgggcgg tcgttgcaga ctcccttcgg cacggtcttc
     2281 gcgaccaata tcacgcccga ccccgagacg ggcatcgccc gctggtcgcg cgaggctttt
     2341 aggcgagctc tgcgcgaggg cgtggcacag aacggcgagc atctctatcc cgcctttccc
     2401 tacgatcatt tcaccaaggc gagcgatgcc gacatcgacg cgctctacgc cttcgtcatg
     2461 acgcgcacgc ccgtccaggc gcgcccgccg gccaaccagt tgaagccgcc gttcggtttc
     2521 cgtccgctgg tcgcggcctg gaacctgctc tttctcgaca agggtccgct cgccgacgac
     2581 cccaaccagc cggccgagtg gaatcgcggc cgcgcgctcg ccgagggact ggcgcattgc
     2641 ggcggctgcc atacgccgcg caatccactt ggcgccgagc gccgcgatca cgcctatgac
     2701 ggcgcctgga ccgaaggctg gtacgccccg ccgctcaatg ccaactctcc ggcggtgcgg
     2761 ccgtggaccg ccgacgaact gttcgcctat ctgcgcaccg gtctcagttc aacccacgcc
     2821 gccgcggccg gcccgatggg cagggtcacg cgcgcgctcg cccaggcgcg cgaggacgag
     2881 gttcgcgcca tcgccgtcta tgtcgcctcc ttgatggcgc acgcaccggc cgcgcaaggc
     2941 gcgccgccgg cggacaaggg gaccgtggcc gacgcgagcc accccgaagc cgccgtgttg
     3001 tttgccggtg cctgcgccgt ctgccacgag gccggcgcgc cgatgatgca ggaaggccgc
     3061 ccgccgcttg cctggggaac gccgctgcac gaggacacgc ccaacgacac catccagatc
     3121 atcgtgcacg gccttgcacc gccggccggc cgctccggtc cggccatgcc ggcctatggc
     3181 gagagtttca gcgaccgcca gcttggcgac atcgtcgcct acctgcgcgc gcgctacacc
     3241 gacaagccgc cgtggcccga catcccgcgg gcggtggctg aagcccgcaa ggagggcgac
     3301 gaatgatctc cctcgacgtc aacggcgcca cccatcaggt cgaagccgat ccggacacgc
     3361 cgctgctcta cgtcctgcgc aacgatctca aattgaacgg cgccaaattc ggctgcgggc
     3421 tcggccagtg cggcgcctgc accgttctgg tcgacgacaa gcccgccttc tcctgcctgc
     3481 tgccgatcgc ggcgctggcc ggccgcaagg tgcgcacgat cgaaagcctc ggaacgcagg
     3541 aaaggctcgg cgagctgccg gccgcgttcg aggccgagca ggcggcgcag tgcggctact
     3601 gcatcgccgg catgatcatg cgggcgcagg cgctgctgga acgcaacaac cggccgaccg
     3661 attcagagct gcgcgcccac atggcgccca atctctgtcg ctgtggcacc cacatgcgca
     3721 tcctgcgcgc cgtgcggcgc gccgctgcgg cgatgggcgg cggcgtgcgc gacgacccgg
     3781 agcgcacgct gtgagcggcc tctcgcgacg cagtctgctc ggcaatggcg cgctggtcgt
     3841 cgccttctcc ttgtcgcgcc gcgcggtggc ccaggatcct gggaagaagc ccgctttgcc
     3901 cggcgatctc gagaaatttc cattgctcga ctcgtggatc cgcatcgcag ccgacggacg
     3961 catcacggtg ttcacgggca aggcggagct cggccaggga ttgaagacgg cgctgatcca
     4021 gatcgcggcg gacgagctcg cggtcccggc ggccagcatc gagctcatca ccgccgatac
     4081 cgcgcgcacg cccgacgagg gtatcaccgc gggcagtcgt tcgatgtcgg acagcggcac
     4141 ggccattctc aatgccgccg ccaacgtgcg cctgctgctg gccgagacgg cggcctggcg
     4201 attgctcacc gaggtggaca agatcgaact gcgcgatggt gcggcgcatg cgccgaacgg
     4261 cgaaagcctg ggctacggcg aactggcggc gatgctgtcg ctccacgtgg ccgccaagcc
     4321 cgacgtcggg cggcgcgagg cgggcgtggg cgtgatcggc accaacttgg cgcgcgtcga
     4381 tatcccggcc aagctgagcg gtggtgcggc ctacctgcag gacatgcggc tgcccggcat
     4441 ggtccacgcc cgcgtcgtgc gcggtcccag cgacggcacg cggctgaaac cgggcgacat
     4501 cgacgctgtc gccaagatgc cgggagtcgt gcgcgtggtg cgcgacggcg gcttcaccgc
     4561 cgtgctggcg ggccaggaat ggcaggccgt caaggcgctg cgccgcctgc aggccgccgg
     4621 ctgggagcgg gccggtgcgc cgctgccggc ggaggacatg cgcgaggcga tccgccgcct
     4681 gccggcgcag gacgtgccga tcttcgacac gcccgggccg ccgtcgccgg cggacggcca
     4741 ggtggtgaag gcgcgctaca gccggccgtg cctgatgcat ggcgcaatcg gcccgtcgtg
     4801 tgcgctggcc ctctggcaga acgagggcgt cacggtgtgg acgcacagcc agggcgtcta
     4861 tcccctgcgc aaggccttgg ccgaactgct gcgcctgccg gccgacaagg tgcgctgcat
     4921 ccatgtcgaa ggctcgggct gctatggcca caacggcgcc gacgatgtcg ccgccgacgc
     4981 cgcccttgcc gcgcgcgcgg tgccgggccg tccggtgcgc gtgcaatgga tgcgcgagca
     5041 ggagcatggc tgggagccgc tcggctcggc gatggtcgtc gaactgcaag ccacgttggg
     5101 cgccgacggc cgcatcgccg aatggcggca cgacgtgtgg agcaatgcgc ataacaaccg
     5161 ccccgccacc gccggcggct tgctggcagg cgccgagctc gacccgccgt ttccccgcca
     5221 ggtgcccaag ccgatcccga tgccggaggg cggcggccat cgcaacggca acccgctcta
     5281 tgccctggcc aatgccaagg gggtctacca cttcatcgag caggcaccgg tgcgcgtgtc
     5341 ggcgctgcgc tcgctcggcg cgcacatgaa tgtcttcgcg atcgagtgct tcatggacga
     5401 gctggcgacg gcgtcgggcg ccgatcccgt cgccttccgt ctcgcccata tgtcggatgg
     5461 gcgtgcccgc gaggtcatgc aagccgcggc cgatcgcttc ggctgggccc agcgaaccaa
     5521 aggcggcaat gatcgcggct gcggctttgc ctttgcccgc tacaagaacc ttgccgccta
     5581 ttgcgcggtg gcgatggaga tcgccgtcga tcgcgacagc ggcaagatag aaattccccg
     5641 cgtggtcgcg accgtcgaca gcggcgaggc cgtcaatccc gacggcatcc gcaaccagat
     5701 cgagggcgcg atcctccagt cgctgagctg gacgatccac gaagccgtcg ctttcgatac
     5761 ggcgcaccgc agcagcttcg actggagcgc ctacccgatc ctgcgcttcg acgccgttcc
     5821 ggccgtcgtc gaggtccagg tgatcgatcg gccgcgacag cctttcctgg gaaccggcga
     5881 agcaggacaa gggcccgccg ccgccgccct ggcgaacgcc gtggccgatg cgctggcgtt
     5941 gcgcgtgcgc gacatgccac tcgcgcccga aaagctgagg tcggccacgc cgaagtcggg
     6001 gtagagcata ttccgctcct gcaaatcacc tcgccctgag gagcgcacga agtgcgcgtc
     6061 tcgaagggtg ggcagcctgt cttgccgttg cccacccttc gaga
//
LOCUS       DASWGA010000035         2380 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1396604, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000035 DASWGA010000000
VERSION     DASWGA010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1396604"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1893
                     /locus_tag="VF991_00690"
     CDS             <1..1893
                     /locus_tag="VF991_00690"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9554976.1"
                     /translation="IGKLEGPELILDPAKWPKKFSEAPVLAELVKAGKLPPVDRRLPE
                     KPLVVPVVEKVGEYGGVWRRAFLGPADSNNYVRVVFDALFRFSPDGAKIEPKIAESAE
                     SSADFKTWTIKLRKGSKWSDGQPFTADDILFWYNDVLLNKELTPSLPGWIKNADGSPA
                     KVEKVDDTTVRFTYAAPATLFLTAVANQDGADRTFAMFLPAHYLKKFHPAHAAKADID
                     KAAQAAGFKTWTELFANRNAPPENPERPTMAAWAPTSRASDPVFTLRRNPYFVGVDKD
                     GNQLPYIDEVRFTYFADAQALNLAAIAGTFDMQERHINMTNYPVLKDQEKTGKYRVIA
                     WPTFGGADAVIAINSTYTADPEMGKVMANKDFRVALSLAINRDQIKESVFLGLGEARQ
                     GVPAPWHPYFPGPEWAQKYTEFKRDEANKMLDGIGLNKKDANGIRLLPNGKPATIEIS
                     VVPAFGAWPDVALLVAKDWEAVGIKTIVQVRERALHFKMNENNELMAEVWNEDTSAFP
                     YTGNAKADPRNAPILTMGPLWRRWYATGGKEGAEPPPGMKRIVEIVDKARTVGPEEQV
                     KLSQELYRIWAENLYEIGTIGLTPMVQGVVVANTKFRNVPTTLGNDWPLRSPGNARTE
                     QFFFAK"
     gene            2059..>2380
                     /locus_tag="VF991_00695"
     CDS             2059..>2380
                     /locus_tag="VF991_00695"
                     /inference="COORDINATES: protein motif:HMM:NF040248.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9554977.1"
                     /translation="MTRYILQRLALLPLLMVIYSFVIFVIIQAPPGDFLTAYVATLAS
                     SGSSISSEQIQALRQQYGLDQPMIVQYVLWVQHLLHGDFGLSLEYQRPNADLIGEQLG
                     LTVAL"
BASE COUNT          460 a          805 c          741 g          374 t
ORIGIN      
        1 atcgggaagc tcgaaggtcc cgagctgatc ctcgaccccg cgaagtggcc gaagaagttc
       61 agcgaggcgc cggtgctggc cgagctggtg aaggccggca agctgccgcc ggtcgaccga
      121 cgcctgcccg agaagccgct ggtcgtgccg gtggtcgaga aggtcggcga atatggcggc
      181 gtgtggcgcc gtgccttcct gggcccagcc gattccaaca actacgtgcg cgtggtcttc
      241 gacgcgctgt tccgcttctc gcccgacggc gccaagatcg agcccaagat cgccgaaagc
      301 gccgagtcct cggccgactt caagacttgg acgatcaagc tgcgcaaggg ttccaagtgg
      361 tcggacggcc agcccttcac cgccgacgac atcctgttct ggtacaacga cgtgctcttg
      421 aacaaggagc tgacgcccag cctgccgggc tggatcaaga acgccgacgg ctcgcccgcc
      481 aaggtcgaga aggtcgacga caccacggtg cgcttcacct acgccgcgcc ggcgaccctg
      541 ttcctcaccg ccgtcgccaa ccaggacggc gccgaccgca ccttcgcgat gttcctgccg
      601 gcgcactacc tcaagaaatt ccacccggcg catgccgcaa aggctgacat cgacaaggcc
      661 gcacaagcgg ccggcttcaa gacctggacc gaactgttcg ccaaccgcaa cgccccgccg
      721 gaaaaccccg agcgcccgac catggcggcg tgggcgccga ccagccgggc cagcgatccg
      781 gtgttcacgc tccggcgcaa cccgtatttc gtcggcgtcg acaaggacgg caaccagctg
      841 ccctatatcg acgaggtgcg tttcacctat ttcgccgacg cccaggcgct caacctcgct
      901 gccatcgccg gcaccttcga catgcaggaa cggcacatca acatgaccaa ctacccggtg
      961 ctgaaggacc aggagaagac cgggaagtat cgcgtcatcg cctggccgac cttcggcggg
     1021 gcagatgcgg tgatcgccat caactcgacc tacacggccg atccggagat gggcaaggtg
     1081 atggcgaaca aggatttccg cgtggcactc tcgctcgcca tcaaccgcga ccagatcaag
     1141 gagagcgtgt tcctcgggct tggcgaggcg cggcagggtg tgcctgcgcc gtggcatccc
     1201 tatttccccg ggcccgagtg ggcgcagaaa tacaccgagt tcaagcgcga cgaagccaac
     1261 aagatgctcg acggcatcgg gctgaacaag aaagacgcca acggcatccg cctgctgcct
     1321 aacggcaagc cggcaacgat cgagatcagc gtcgtgccgg ccttcggcgc ctggcccgac
     1381 gtggcgctct tggtggccaa ggactgggag gcggtcggca tcaagacgat cgtgcaggtc
     1441 cgcgaacgcg ccctgcattt caagatgaac gagaacaacg agctgatggc cgaggtctgg
     1501 aacgaggaca ccagcgcctt tccctatacc ggcaatgcca aggccgatcc gcgcaacgcc
     1561 ccgatcctga ccatgggtcc gctgtggcgg cgctggtatg cgaccggcgg caaggaaggt
     1621 gcggagccgc caccggggat gaagcgcatc gtcgagatcg tcgacaaggc gcgcaccgtc
     1681 gggcctgagg agcaggtcaa gctcagccaa gagctctacc ggatctgggc cgagaacctc
     1741 tacgagatcg gcaccatcgg cctcacgccg atggtgcagg gcgtggtcgt cgccaacacc
     1801 aagttccgca acgtgccgac gacgctcggc aacgactggc ccctgcgcag ccccggcaac
     1861 gcccgtaccg agcagttctt cttcgccaaa tgaggttacc gccttcattg aatgttgatc
     1921 caaaaacaac ctcatgctga ggagcgagcg cagcgagcct ctcgaagcat gggccgcagg
     1981 caccgtgcgc gcggccaccc ttcgagacgg ccctgcgggc ctcctcaggg tgaggtcgtg
     2041 ttcgtatcgg cgtaaagcat gacccgctac atcctccagc ggctggcgct gctgccgctg
     2101 ctgatggtga tctactcctt cgtcatcttc gtcatcatcc aggcgccgcc gggcgacttt
     2161 ttaacggcct atgtcgccac gctcgcctcg tcgggctcgt cgatctcgtc cgagcagatc
     2221 caggcgttgc gccagcagta cggcctcgat cagccgatga tcgtgcaata cgtgctgtgg
     2281 gtgcagcacc tgctgcacgg cgacttcggg ctgtcgctcg aataccagcg gcccaatgcc
     2341 gacctgatcg gcgagcagct cgggctcacc gtggcgctgg
//
LOCUS       DASWGA010000036         5261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_257430, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000036 DASWGA010000000
VERSION     DASWGA010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5261
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257430"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VF991_00700"
     CDS             <1..447
                     /locus_tag="VF991_00700"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX9554978.1"
                     /translation="DKLGLARQLGATDTVNAKDADHVKQVRDLTNGGVDYAFDLAGTI
                     KAMETAYLVTRWGGTTVTAGLSPIAADFSFKQSMLVSEEKTIKGSYMGSCVPVRDIPR
                     FIALYQQGRLPVDRMMSQRIGFAELNEGFDRLQDVATVRQVLVPHG"
     gene            complement(501..743)
                     /locus_tag="VF991_00705"
     CDS             complement(501..743)
                     /locus_tag="VF991_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554979.1"
                     /translation="MSLVLGVLALAAVAAPASAAWWGDGRWHADARWHSWPDRYYYGY
                     YYRAPPVVYATPYNYGYYAPPVIYDSAPGFSISIRP"
     gene            complement(777..1271)
                     /locus_tag="VF991_00710"
     CDS             complement(777..1271)
                     /locus_tag="VF991_00710"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEX9554980.1"
                     /translation="MTHFRLFTPVARSLAIASLTGAALLAGSLSPATAQSPPGQKPPA
                     AEAATSSKPETVEQRINTLKASLKITPELESKWNGVAQAMRDNASRMEKLVATKRAIP
                     PEKMTAIDDLKTYQEFAEAHLDGLKHLTSAFKSLYGAMNADQKKNADQVFQKYGPTNP
                     PSQG"
     gene            complement(1483..1917)
                     /locus_tag="VF991_00715"
     CDS             complement(1483..1917)
                     /locus_tag="VF991_00715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554981.1"
                     /translation="MVYATPYNYGYQRPPVVYDNTPGFTIRIQQRKNKKRKRRAAMPA
                     VFAWVDPIDERPRDGGARPKGSTPARLPQSTVLHHECYEAAPEAADRSAYDAEMSKFS
                     ARKEMQATTWTQRVLNRMGPLNSMNGREKMRAALARLGFESR"
     gene            complement(1943..3151)
                     /locus_tag="VF991_00720"
     CDS             complement(1943..3151)
                     /locus_tag="VF991_00720"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9554982.1"
                     /translation="MSRDARVIALVAVAHFTSHIHIMLLPPIFGQVKDAFGVSYIEIG
                     LALTAFNVCSAMLQTPAGFLVDRIGPRLMLTAGLIVGSAAIAAAALLPGYWFFVIAYG
                     LMGVANTVYHPADYSILSATVDHRRIGKAFSIHTFAGYLGSGLTPAMVLTCAAIWDWH
                     GAFLFAAGLTFAVGLLVIVAGGVLPRVVRKPLGPSKTAPARSETKVGLDLLLSAPILR
                     NLLFFFCLAMANGGIQTFTVVGLGAIHGTPASAANIALSGFLLFSAAGVLLGGIIADR
                     TPHHERVAAVGFACTSTMAILMAWVNMPAVVLIAVMSLGGLLNGVIQPSRDMMVRAVT
                     PVGSFGKVFGFVTTGFNLGGMIAPLLYGWLMDRGEPRAIFMIVVAFIFLALVTAITRA
                     KPHARAAWAP"
     gene            complement(3180..4007)
                     /locus_tag="VF991_00725"
     CDS             complement(3180..4007)
                     /locus_tag="VF991_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX9554983.1"
                     /translation="MRLVSFRQAGVAKFGAVADGGIVDLSSRWPSLREAIAAKAMGEL
                     AAAAKRPADLKFDDVELDPVIPNPAKILCVGLNYSSHVGEMGRELPTAPSVFSRFSDT
                     LVATGGSIVRPRASIALDFEGELAVVIGERCRHVPRASALSVVAGYTCFLDGSVRDFQ
                     KHSTTAGKNFPATGPLGPWLVTSDVIADPQRLELTTRLNGKMVQHDTTDHMIFDVAAI
                     IEYLSTVTWLEPGDIIATGTPDGVGAGRKPPLWMKGGDKVEVEISGIGILGVNVVDE"
     gene            complement(4152..4880)
                     /locus_tag="VF991_00730"
     CDS             complement(4152..4880)
                     /locus_tag="VF991_00730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEX9554984.1"
                     /translation="MTDILLINPNTTQSITDLVLKTARRFAAKGTNLRAVTGTFGPRY
                     IASRVGYAIAGHAAVDALANDRHAKDAVVLACFGDPGLDALREIAKVPVVGMADASIL
                     QACAVGRRFSIVTGGERWKSMLEDFVGHHGLASRLASVRTVTPTGADIARKPEAALAL
                     LAKGCTACVREDGADVVILGGAGLAGLAAKLKTMVDAPLLDGVACAISMAETLARQKP
                     AKAGHPPAAVESVGLSPALAKLLG"
     gene            complement(4877..>5261)
                     /locus_tag="VF991_00735"
     CDS             complement(4877..>5261)
                     /locus_tag="VF991_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX9554985.1"
                     /translation="RFVSDVAAEHGSFGKFLANWPAHDQVGLLEVFAKRGSRLGGFSG
                     QYLLRFLGWDAFVLSGDVLLCLRDSGVPLSATGTSKKDLKAAQVQINAWAKESGLPIT
                     HVSRICALSIGENYDVARLKEIMQL"
BASE COUNT          929 a         1675 c         1794 g          863 t
ORIGIN      
        1 gacaagctcg gtctcgcccg ccagctcggc gcgaccgaca cggtcaatgc caaggacgcc
       61 gatcatgtga agcaggtgcg cgacctcact aacggcggcg tcgactatgc cttcgatctc
      121 gccggcacca tcaaggccat ggagacggcc tacctcgtga cgcgctgggg cggcaccacg
      181 gtgacggcgg ggctgtcgcc gatcgccgcc gatttctcct tcaagcagag catgctggtg
      241 agcgaggaga agaccatcaa gggcagctac atgggaagct gcgtgccggt gcgcgacatc
      301 ccgcgcttca tcgcgctcta ccagcagggc cgcctgccgg tcgaccgcat gatgagccag
      361 cgcatcggct tcgccgagct caacgaggga tttgatcggc tgcaggacgt ggccacggtg
      421 cggcaggtcc tggtgccgca cggctgagac gcacaaaaaa cggcgggcat tgctgcccgc
      481 cgtttctcgt tggttcggtg ttacggcctg atgctgatcg agaagccagg cgcgctgtcg
      541 tagatcaccg gcggcgcgta gtagccgtag ttgtacggcg tcgcgtaaac caccgggggc
      601 gcccggtagt agtagccgta gtagtaccgg tcgggccagc tgtgccagcg ggcgtcggca
      661 tgccaccggc cgtcgcccca ccaagcggcg ctggccggag cagccacggc cgccaaggcg
      721 agcacgccga ggacaaggct cacgatgcgt ttggtcatga tggacctcct attgacttaa
      781 ccctgtgatg gcgggttcgt cggaccatac ttctggaaca cctggtcggc gttcttcttc
      841 tggtcggcgt tcatggcgcc atagagcgac ttgaaggccg aggtcagatg cttcagcccg
      901 tcgagatgag cctcggcaaa ctcctgatag gtcttcaggt cgtcgatcgc cgtcatcttc
      961 tcgggcggga tcgcccgctt ggtggccacc agcttttcca tgcggctggc gttgtcgcgc
     1021 atcgcctggg cgacgccgtt ccatttggac tcgagttcag gcgtgatctt gagcgacgcc
     1081 ttgagcgtgt tgatgcgctg ctcgacggtt tcaggcttgc tgctcgtcgc cgcctcggcg
     1141 gcgggcggct tctggccggg cgggctttgt gcagtcgccg ggctgagcga gccggcgagc
     1201 aaggcggcgc ccgtcaggga cgcgatggca agtgaacgcg ccacgggagt gaacaggcgg
     1261 aaatgtgtca tgcggtgttc ctcttccaag gggtgcggcc gcgcctgtcc ccttcgtgcg
     1321 gacagccggc cgctcttgga aaaacgtcgt tgccaaacga gcggttccgc cccaagcggc
     1381 atgcccggaa aaaacggctg gtcacggctt cttttggagc gccgccgggc accatggtga
     1441 ttgcccttgc aaatcaaggg cttgccgcgg ccctatgctg tcctagcgac tttcgaagcc
     1501 cagccgggcg agcgcggccc gcattttttc ccggccgttc atcgagttca gcggccccat
     1561 gcggttcaag acacgctgcg tccaggtcgt tgcctgcatt tccttgcggg ccgagaattt
     1621 cgacatctcg gcgtcgtagg ccgagcgatc cgctgcctct ggcgcagcct cgtaacactc
     1681 gtggtgcaat accgtcgatt gcggcagacg cgcgggtgtc gatcctttcg gacgtgcccc
     1741 accgtctcgt ggccgttcat cgatcggatc gacccacgca aaaacggcgg gcatcgctgc
     1801 ccgccgtttc cgtttcttgt tcttgcgttg ctgtatgcgg atcgtgaagc cgggcgtgtt
     1861 gtcgtacacc accggcggcc gctggtagcc gtaattgtac ggcgtggcat agaccaccgg
     1921 cgggctttat tggaggcggg cgctagggag cccatgcggc tctggcgtgc ggtttggcgc
     1981 gggtgatggc ggtcaccagc gcaaggaaga tgaaggcgac gacgatcatg aaaatcgccc
     2041 gcggctcgcc gcgatccatc agccagccgt agagcagcgg cgcgatcatg ccgccgaggt
     2101 tgaagccggt cgtgacgaag ccgaacacct tgccgaacga accgaccggc gtgaccgcgc
     2161 gcaccatcat gtcgcgcgac ggctggatga cgccgtttaa aagcccgccc agcgacatga
     2221 cagcgatcag gaccacggcc ggcatgttca cccaggccat caggatggcc atggtcgagg
     2281 tgcaggcgaa gcccacggcg gccacgcgct cgtggtgcgg cgtgcggtcg gcgatgatgc
     2341 cgcctaaaag cacgccggct gcgctgaaca gcaggaaacc cgacaatgcg atgttggctg
     2401 ccgatgccgg ggtgccatgg atggcgccca ggccgacgac ggtgaaggtc tggatgccgc
     2461 cattggccat ggcgaggcag aagaagaaca ggagattgcg caggatgggc gcgctcagca
     2521 gcaggtcgag cccgaccttg gtctcgctcc tggcaggcgc ggtcttggat ggtccgaggg
     2581 gcttgcgcac gactcgcggc agcacgccgc cggccacgat gacgagcaac ccgacggcaa
     2641 aggtaagacc ggcggcgaac aaaaacgcgc cgtgccagtc ccagatcgcc gcgcacgtca
     2701 ggaccatggc gggcgtgagg cccgaaccga gataacccgc gaacgtatgg atcgagaacg
     2761 ccttgccgat ccgcctgtgg tcgacggtgg ccgacaggat cgaatagtcg gccgggtgat
     2821 agacggtgtt ggcgacgccc atcaggccgt aggcaatgac gaagaaccag tagcccggca
     2881 gcagggcggc cgcggcgatg gcggcactgc cgacgatcag ccctgcggtc agcatcaggc
     2941 gcgggccgat acgatcgacc aggaagccgg ccggcgtctg cagcatcgcc gagcagacgt
     3001 tgaaggcggt gagcgccagg ccgatctcga tgtagctgac gccgaacgcg tccttcacct
     3061 ggccgaagat cggcggcagc agcatgatgt ggatgtggct ggtgaaatgc gccacggcga
     3121 ccagggcgat cacccgggca tcgcgactca acccggcctt tgccggcaaa gcgacctgtt
     3181 cactcgtcga cgacattgac gcccaggatt ccgatgccgg agatttcgac ctcgaccttg
     3241 tcgccgccct tcatccacag cggcggcttg cggccggcgc cgacgccgtc gggcgtgccg
     3301 gtggcgatga tgtcgcccgg ctccagccag gtcacggtcg agagatattc gatgatggcg
     3361 gcgacgtcga agatcatgtg atcggtcgtg tcgtgctgca ccatcttgcc gttcagccgc
     3421 gtcgtgagct cgagccgctg ggggtcggcg atgacgtccg aggtgaccag ccaggggccg
     3481 agcggtccgg tggccggaaa gttcttgccg gcagtggttg aatgcttctg gaagtcgcgc
     3541 acgctgccgt cgaggaagca ggtgtagccg gcgacgaccg agagtgcgct ggcgcgcggc
     3601 acgtggcggc aacgctcgcc gatcacgacg gcgagctcgc cttcgaaatc gagcgcgatc
     3661 gaggcgcgcg gccgcacgat cgagccgccg gtcgccacca gggtgtcgct gaagcgcgag
     3721 aagacgctgg gcgcggtcgg cagctcgcgg cccatctcgc cgacatggct ggaatagttg
     3781 aggccgacgc aaaggatctt ggccggattg ggaatgaccg gatcgagctc gacatcgtcg
     3841 aacttgaggt cggcggggcg cttggcggcg gccgcaagct cgcccatcgc cttggccgcg
     3901 atggcctcgc gcaggctcgg ccagcgcgac gacaggtcga caatgccacc gtccgcgacc
     3961 gcgccgaact tggccacgcc cgcctggcga aaactgacca aacgcatgag ggtgacccaa
     4021 tccgaggggt cgatgcgtgt caagttaagg gggcgtcgaa taaagcaaaa ttgtcatccc
     4081 gaggccgcag gccgagggac ctttcctgct gcctaaaggt ccctcgctac gctcgggatg
     4141 acaccgagtg cttagccaag cagcttcgcc aatgcaggcg aaaggccgac gctttcgacg
     4201 gcagcaggcg gatggccggc cttggccggc ttctggcgag ccagcgtctc ggccatcgaa
     4261 atcgcgcagg caacgccatc cagcagaggc gcatcgacca tcgtcttcag cttggctgca
     4321 agcccggcca ggccggcgcc gcccaggatc accacgtcgg cgccatcctc gcgcacgcag
     4381 gccgtgcaac ccttggcgag caaagccaag gctgcctcag gcttgcgggc gatatccgcg
     4441 ccggtcggcg tcacggtccg caccgacgcc agccgcgagg caaggccgtg gtggcccacg
     4501 aaatcctcca gcatcgactt ccagcgctcg ccgccggtga cgatggaaaa ccgccggccg
     4561 accgcacagg cctgcaggat cgaggcgtcg gccatgccga ccaccggcac cttggcgatc
     4621 tcccggagcg catcgaggcc cgggtcgccg aagcaggcga gcaccacggc atccttagcg
     4681 tggcgatcgt tggccagcgc gtcgaccgcg gcgtggccgg cgatggcgta gcccacgcgc
     4741 gaggcgatgt agcgcggccc gaaggtgccg gtgacggcgc gcaaattggt gccctttgcg
     4801 gcgaagcgtc gggccgtctt cagcaccagg tcggtgatcg actgcgtggt gttgggattg
     4861 atcagcagga tatcggtcat agctgcatga tctctttcag ccgggccacg tcgtagttct
     4921 cgccgatcga cagggcacaa atgcgcgaga cgtgggtgat cggcaggccg ctttccttgg
     4981 cccaggcgtt gatctgcact tgcgccgcct tgagatcctt cttcgacgtg ccggtggcgc
     5041 tcagcggcac gcccgaatcg cgcaagcaaa gcagcacgtc gccggacagc acgaaggcat
     5101 cccagccgag gaagcgcagc aggtactgcc cgctgaaacc gcccagccgc gagccgcgct
     5161 tggcgaatac ttccaagaga ccgacctggt catgggctgg ccagttggcc aaaaacttgc
     5221 cgaagctgcc atgctcggcc gcgacgtcgc tgacgaacct g
//
LOCUS       DASWGA010000037         2741 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_889494, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000037 DASWGA010000000
VERSION     DASWGA010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_889494"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VF991_00740"
     CDS             complement(<1..251)
                     /locus_tag="VF991_00740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554986.1"
                     /translation="MRSQSMDGTTIGAVFASTVSAHGDRPFLAVPANAARGYLPSGFE
                     ISYGEAGRRVDELAAIYREAGYGLGHRVATLLENHPDHIL"
     gene            369..731
                     /locus_tag="VF991_00745"
     CDS             369..731
                     /locus_tag="VF991_00745"
                     /inference="COORDINATES: protein motif:HMM:NF021525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2255 family protein"
                     /protein_id="HEX9554987.1"
                     /translation="MSKLDADTLRALRDTEEVTIRTDKHPETAVVIWVVVADGEVFVR
                     SARGAKGRWYRDLAAGGSATLEVAGHRLAVQATPATDQASIARASREYLSKYQSSPYA
                     QAVVRAEVLPTTLRLEPR"
     gene            738..1622
                     /locus_tag="VF991_00750"
     CDS             738..1622
                     /locus_tag="VF991_00750"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9554988.1"
                     /translation="MSYFLALVIDGALAGAIYALIALAFVLVYRASAMMNFALGEWLV
                     FGAVLAGTGLHFLQLGTVGALIFAALGMIALAAGFYRLAVRRLVARPALSAIMVTLGL
                     GMVMRGSGLLLPSAAPGFIPQSVLGEPIMIGGIAIAADRLAAAGVAALCAALIGGFYR
                     FSRTGIALRAIADDPQAAMSAGIDVDRHLMIVWSLSGMVALVAGILWTFVTGGGFGVA
                     LIGLKVFPIVILGGLDSIAGTIIAAIAVGVLESLGAGYLDEALGRGFGGIAPYLALLA
                     MLMLRPYGLFGQPRIERV"
     gene            1916..>2741
                     /locus_tag="VF991_00755"
     CDS             1916..>2741
                     /locus_tag="VF991_00755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9554989.1"
                     /translation="MDLAFTPEERQFADDVRAFVRSHLPADIRDKVKNGKHLGRDDYM
                     RWQQALGTQGWLVYTWPKKHGGPGFTPAQRYIFENICAEENAPGIIPFGTKMVGPVIY
                     TFGNEAQKARFLEPIRRSTVWWCQGYSEPGSGSDLASLRTKAEKQGDHYIVNGSKTWN
                     TMGHWADWIFCLVRTDPKAKPQEGISFLLIDMKTPGITVKPIIMADGGHEVNEVFFDN
                     VKVPVENLIGKEGEGWTYAKFLLANERLGIAAVPQSKRGVEALKDIARAELLDGKPL"
BASE COUNT          444 a          906 c          915 g          476 t
ORIGIN      
        1 aggatgtggt cgggatggtt ctccagcagc gtcgccacgc gatggccaag gccatagcct
       61 gcctcgcggt agatcgccgc cagctcgtcg acgcgccggc cggcctcacc gtaggaaatc
      121 tcgaagcccg acggcaaata accgcgcgcc gcattggccg gcaccgccag gaacggacga
      181 tcgccgtggg ccgaaacggt gctggcgaac accgcgccaa tggtcgtgcc gtccatggac
      241 tgagaccgca tctccaattg caagcaggct tataatcgcc gcccgtcagt ttcgaccgcc
      301 aactcccctg tcggctacgg tatgaaggaa gctgccgtcg ggcaagcggc gcgaccggag
      361 gccagcccat gagcaagttg gatgcggaca ccctgcgtgc gttgcgcgac accgaggagg
      421 tcacgatccg gacagacaag caccccgaga cggcggtggt gatctgggtg gtggtggccg
      481 acggcgaggt tttcgtgcgg tcggcgcgtg gcgccaaggg gcggtggtac agggacctcg
      541 ccgcgggcgg ctcggccacg ctggaggttg ccggccatcg tctggcggtg caggcgacgc
      601 cggcgaccga ccaagcctcg atcgcgcgcg ccagccgcga atacctcagc aagtaccagt
      661 cgagccccta tgcgcaggcc gtcgtgcgcg ccgaagtgct gccgacgacg ctgcggctcg
      721 agccgcgctg acgggcaatg tcgtattttc tcgccttggt gatcgacggt gcgttggccg
      781 gcgccatcta tgcgctgatc gcgctcgcct tcgtcctggt ctaccgggcc tcggccatga
      841 tgaatttcgc gctgggcgaa tggctcgtct tcggcgcggt gctggctggc acgggtctgc
      901 attttctgca gctgggaacg gtcggggcgt tgatcttcgc ggcgctcgga atgatcgccc
      961 tggccgccgg tttttatcgg ctggcggtgc gccggctggt ggcgcgaccc gcgctgtcgg
     1021 cgatcatggt gaccctcggc ctcggcatgg tcatgcgcgg cagcgggttg ctgctccctt
     1081 ccgcggctcc aggcttcatt ccgcaatcgg ttctcggcga accgatcatg atcggcggca
     1141 tcgccatagc tgccgacagg ctcgccgccg ccggtgtggc ggccttgtgt gccgcattga
     1201 tcggcgggtt ctaccgtttc agtcgaaccg gcatcgcctt gcgagcgatc gccgacgatc
     1261 cccaggccgc gatgtcggcg ggcatcgacg tcgaccgtca cctgatgatc gtgtggagct
     1321 tgagcggcat ggtggccctg gtcgccggca tcctgtggac cttcgtcacc ggcggcggct
     1381 tcggcgtcgc cctgatcggg ctaaaagtct ttcccatcgt catactgggc ggcctcgaca
     1441 gcattgccgg cacgatcatc gcggcgattg cggtgggcgt gctggagagt ctcggcgccg
     1501 gatacctcga tgaggcgctg ggacgcggct tcgggggcat cgccccgtat ctggcgctgt
     1561 tggcaatgct catgctgcga ccctacggac tgttcggcca gccgcggatc gagcgggtat
     1621 aggatctgct tacatagaat actgatacgg cttccgctct caccgcgacc gttggaatcc
     1681 gctggcctac gtgctccatg ccttcccttc cgtcgctgca gccccgcgct cgcttctcga
     1741 gcgccgccaa gagcgttccg gtgcgtcgcc gaccggcgct tgacgtcgaa ccattccaac
     1801 gtaaatccgt tccgcgtcgc ggcgtcgcca gccgccatcc ggttgttgcg cgcttgtccc
     1861 gaccgggctc gccgctaaac tccggccaac cgaaaaccca gcccgggagg ggcgcatgga
     1921 tctcgctttc acgcccgaag aacgccagtt cgccgacgac gtgcgcgcct tcgtgcgcag
     1981 ccatctgccg gccgacatcc gcgacaaggt gaagaacggc aagcacctcg gccgcgacga
     2041 ctacatgcgc tggcagcagg cgctcgggac gcagggctgg ctggtctaca cctggcccaa
     2101 gaagcacggc gggccgggct tcacgccggc ccagcgctac atcttcgaga acatctgcgc
     2161 cgaggagaac gcgcccggca tcatcccgtt cggcaccaag atggtcgggc cggtgatcta
     2221 caccttcggc aacgaggcgc agaaggccag gtttctcgag ccgatccgcc gcagcaccgt
     2281 gtggtggtgc cagggctatt ccgagccggg ctcgggctcc gacctcgcga gcctgcgcac
     2341 caaggccgag aagcaaggcg atcactacat cgtcaacggg tcgaagacct ggaacacgat
     2401 gggccactgg gccgactgga tcttctgcct ggtgcgcacc gatcccaagg ccaagccgca
     2461 ggagggcatc tctttcctgc tgatcgacat gaagacgccg ggcatcaccg tgaagccgat
     2521 catcatggcc gacggcgggc atgaggtgaa cgaggtcttc ttcgacaacg taaaagtccc
     2581 ggtcgagaat ctgatcggca aggaaggcga gggctggacc tacgccaagt tcctgctggc
     2641 caacgagcgg ctgggcatcg ccgccgtgcc gcagtccaag cgcggcgtcg aggcgctgaa
     2701 ggacatcgcc cgcgccgagc ttttagacgg caagccgctg a
//
LOCUS       DASWGA010000038         2151 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1902863, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000038 DASWGA010000000
VERSION     DASWGA010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1902863"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..1591)
                     /locus_tag="VF991_00760"
     CDS             complement(35..1591)
                     /locus_tag="VF991_00760"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9554990.1"
                     /translation="MSESLTRQWKVTKQPVRGKGVVVAQNGRAAEVGAEILRKGGNAI
                     DAAVATGMAIGTLEPWMSGIGGIGFMTIFSAKEGRAWTIDYGPLSAKKLDPKNYPIVG
                     PGPANPFAWPDILEQRNEVGYHSIAVPGQVAGMAKALERFGTLKWPDVMAPAIALARR
                     GMELDWYMQVMIANGAEHLAKFPASKANYLPDDGRVPTLDWQANVRYLKLGNLGETYQ
                     RLSDGGPRAFYEGALARDIAGDLQAGGSAIDYDDLRSYEARIVEPLAFQHGSATINVA
                     GGLTAGPTLRRTIELAGAHTKGKGAPDADFFVAIAQGMHQAYEERLKTMGEKPTNSCT
                     THFCAADSEGNMVALTQTLMSLFGSGVMLPKTGITMNNGMLWFDPEPNRPNSMAPGKR
                     PLCNICPVVVTKDGQPWFCIGASGGRRIVPAVTQLALMLIDRGLDVTTAFHQPRIDVS
                     GVGPIRVNRDLPDAVKQAIAARLPIVEVTNQVSPLGFANPSCIVRDPASGELTGMNEV
                     MSPWAGGAAQ"
     gene            1689..2081
                     /locus_tag="VF991_00765"
     CDS             1689..2081
                     /locus_tag="VF991_00765"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9554991.1"
                     /translation="MTELNQIDLRALSVGNKRTWDAFVAAAAPLINAVVRRALASYRL
                     NEEDVMDAAQDVFVRLCANDFRLLKTYDPARAGLSTWLAVVARSAAIDHARRRRQATQ
                     PIDEVPEALLGVDPEKLGDLGHVPLLVI"
BASE COUNT          339 a          700 c          737 g          375 t
ORIGIN      
        1 gccggtgcgg cgaacacgcc aagcagaagg gcggctactg cgccgcgccg ccagcccatg
       61 gcgacatcac ctcgttcatg ccggtcaatt ctccgctcgc cggatcgcgc acgatgcagg
      121 acgggttggc aaagcccagc ggcgagacct ggttggtcac ctcgacgatc ggcagcctgg
      181 cggcgatcgc ctgtttcacc gcgtcgggca ggtcgcggtt gacgcgaatc gggccgacgc
      241 ccgaaacatc gatgcgcggc tgatggaacg ccgtcgtcac atccagaccg cggtcgatca
      301 gcatcagcgc gagctgggtc accgcgggca cgatgcgccg gccgcccgag gcgccgatgc
      361 agaaccacgg ctggccgtcc ttggtgacca ccacggggca gatgttgcac agcggccgct
      421 tgcccggcgc catcgaattg ggccggttgg gctcggggtc gaaccacagc atgccgttgt
      481 tcatggtgat gccggtcttg ggcagcatga cgccggagcc gaacagcgac atcagggtct
      541 gcgtcagcgc caccatgttg ccttccgagt cggcggcgca gaaatgcgtg gtgcaggagt
      601 tggtgggctt ctcgcccatg gtcttcagcc gctcctcgta ggcctggtgc atgccctggg
      661 cgatggcgac gaagaaatcc gcatcgggcg cgcccttgcc cttggtgtgg gcgcccgcca
      721 gctcgatcgt gcgcctgagc gtcgggccgg cggtgaggcc gccggcgaca ttgatggtcg
      781 cgctgccatg ctggaacgcc aacggctcga cgatgcgcgc ctcgtaggat cgcagatcgt
      841 cgtaatcgat cgccgagccg ccggcctgca gatcgccggc gatgtcgcgc gccagcgcgc
      901 cttcatagaa cgcgcgggga ccgccatcgc tcagccgctg gtaggtctcg ccgagattgc
      961 cgagcttgag gtagcggacg ttggcctgcc aatcgagcgt cggcacccgg ccatcgtcgg
     1021 gcaggtagtt ggccttggac gcggggaact tcgcgaggtg ctcggcgccg ttggcgatca
     1081 tcacctgcat gtaccagtcg agctccatgc cgcgcctggc gagggcaatg gcgggcgcca
     1141 tgacgtcggg ccatttcagc gtgccgaagc gctccagcgc cttggccatg ccggcgacct
     1201 ggccgggcac ggcgatcgag tgatagccga cctcgttccg ctgctcgagg atgtcgggcc
     1261 aggcgaaggg gttggccggg ccggggccga cgatggggta attcttggga tcgagcttct
     1321 tggcggagag cggaccgtaa tcgatcgtcc aggcgcggcc ttccttggcg ctgaaaatcg
     1381 tcatgaaacc gatgccgccg atgccgctca tccacggctc gagggtgccg atcgccatgc
     1441 cggtggcgac cgccgcgtcg atcgcattgc cgcccttgcg caggatctcg gcgccgacct
     1501 cggcggctct gccgttctgg gcaaccacga cgcctttgcc gcgtaccggc tgcttggtga
     1561 ctttccattg acgggtcagc gactcgctca tcaactctcc taccggttcg cagggactgt
     1621 agcggggcct gatttagcca caaaccctgt taaactgcag ggcggacgga ccaggaaaga
     1681 tcgcaggcgt gacggaactg aaccagatcg acctgcgtgc gctcagcgtg ggcaacaagc
     1741 ggacctggga tgcgttcgtg gctgcggccg cgccgctgat caatgccgtc gtccgtcgcg
     1801 cgctcgcttc atatcgactg aacgaggagg atgtcatgga cgccgcccag gacgtgttcg
     1861 tccggctctg cgccaacgac ttccggctgc tcaagaccta cgatccggcg cgggccggcc
     1921 tgtcgacctg gttggcggtg gtcgcccggt cggcggcgat cgaccacgcc cggcgccgcc
     1981 ggcaggccac ccagccgatc gacgaggtcc ccgaagccct gttgggcgtc gatcctgaga
     2041 agttgggcga cctcggccac gtcccgctcc tcgtcatata ggcatttcag gatcaggatt
     2101 tgacgctcgg tcagaagtcc ttgaggaatc ttgagttttt ccacatggcg g
//
LOCUS       DASWGA010000039         3670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_257612, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000039 DASWGA010000000
VERSION     DASWGA010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3670
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257612"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..986)
                     /locus_tag="VF991_00770"
     CDS             complement(6..986)
                     /locus_tag="VF991_00770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9554992.1"
                     /translation="MTGYSPHGPLGAGSAPLGNLGTVVPEGAAIACLQAAWDAGIRHY
                     DTAPHYGAGLAEHRLGNALRGQPRDAYTLSTKVGRLLHAAPDTLEISQGFVHALPFRR
                     TFDYTAAGTIRSLEDSHQRMGLSRFDIVYIHDCAEDWHGPAWKDRFAEAMTGAAQVLT
                     ALRERGEIRAWGMGLNLVEPALACLDAARPDIFLIAGRYTLLDHTALERLFPACAARG
                     VKVVLGGPYNSGLLAGGTTFNYEPAKADMVARANAILAICERHGADIKAAALQFCAAH
                     PVVAAVIPGPRTSAEVQQNAALMQVAIPGALWGELRRVGLLPESAPTPEK"
     gene            complement(983..1120)
                     /locus_tag="VF991_00775"
     CDS             complement(983..1120)
                     /locus_tag="VF991_00775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554993.1"
                     /translation="MLLGLDPLLSPDLLHALANYPATRGRRFYGDILLTKGVVPPEQR
                     A"
     gene            1295..1582
                     /locus_tag="VF991_00780"
     CDS             1295..1582
                     /locus_tag="VF991_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554994.1"
                     /translation="MIFLLTRNTQIVHAKLAGHVTPFNDALSAVAPSHFWNMATTLGR
                     AALNAEVTKQASVVAYANDFKLMMIVALVALPLIFLLRRAKAQPGEAAILE"
     gene            1797..2720
                     /locus_tag="VF991_00785"
     CDS             1797..2720
                     /locus_tag="VF991_00785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9554995.1"
                     /translation="MTFTVNGMKSKKLVSMDIDHVRGWAEFMDRAMIISLIAVIISAA
                     VLGVTTWLSIKFNGAVRAHESAAFDRYKAEMGRHAAQLEEQAAAARERTGELEQSAAD
                     ANERAARAARESATANERAVELETDAAQARKRVVDLEKAVEDASTRAAEPGREAAAGT
                     ARPAEGQGAPERAASNRDQQPSQIVASLRKYAGTKAAVYVLEEAPDAAAVGSAITGFL
                     TDAGWAPLTWTWSGVGGILGVVVLIKEGSDPATDEAASGILDALRSAGFNAAKGNWPA
                     DWRRFRGTLNGPQTPGPTEAPIRIVIGAKAR"
     gene            2903..>3670
                     /locus_tag="VF991_00790"
     CDS             2903..>3670
                     /locus_tag="VF991_00790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9554996.1"
                     /translation="MSSPSLVIRNGTIVDGSGGDPYEADLGVIDGKIVAIGGSIPKGT
                     EEIDARGKLVTPGFVDVHTHYDAQVTWSDRLSPSSWNGATTVLFGNCGVGFAPCHEDQ
                     HDMLINLMEGVEDIPEVVLSEGLPWNWHSFPDFLDAIAARSYDVDVAAQVPHAALRVY
                     VMGERGANREPASEQDRRRMAQLTSEGLRAGALGFSTSRTLNHRAADGRHIPTLRAEE
                     AELTAIAHALRDTGTGWMQIVSDFEDQDGEIGLFRRLA"
BASE COUNT          650 a         1172 c         1259 g          589 t
ORIGIN      
        1 ccgactcatt tttccggcgt aggtgcgctc tccggcagca ggccgacacg gcgcaactct
       61 ccccagaggg cgccagggat cgctacctgc atgagggcgg cgttctgttg cacttcggct
      121 gatgtgcggg ggccgggaat gacggcggcc acgaccgggt gggcggcgca aaactgcagc
      181 gccgcagcct tgatgtcggc gccgtgccgt tcgcagatgg cgagaatggc gttggcgcgg
      241 gccaccatgt cggctttcgc gggctcgtag ttgaaggtcg tgccgccggc cagcaggccg
      301 gaattgtagg gcccgccaag cacgaccttg acgcccctgg ccgcacaggc ggggaacagc
      361 cgctccagcg cggtgtggtc gagcaacgtg tagcgcccgg cgatcaggaa gatgtccggc
      421 cgggctgcgt cgaggcaggc cagcgccggc tccaccaggt tcagccccat gccccatgcg
      481 cgaatctcgc cgcgctcgcg cagggcagtg aggacctgcg ccgcgccggt catcgcttcg
      541 gcgaagcggt ctttccaggc ggggccgtgc cagtcctccg cgcagtcgtg gatataaacg
      601 atgtcgaagc ggctgagccc catgcgctgg tggctgtcct ccagggagcg gatcgtgccg
      661 gccgcggtgt agtcaaaggt ccggcggaag ggcagggcgt gcacaaagcc ctggctgatc
      721 tccagtgtgt ccggcgcggc atgcagcagc cggccgacct tggtggagag cgtgtaggcg
      781 tcgcgcggtt ggccacgcag cgcattgccc agccggtgtt ccgccagtcc tgcgccgtaa
      841 tgcggcgcgg tatcgtagtg gcgaatgccc gcgtcccagg ctgcctgcaa gcaggcgata
      901 gcggcccctt ctggtactac cgtgccgaga ttgcccaagg gcgcgctgcc agcgccgagg
      961 gggccatgag ggctgtagcc ggtcatgccc gttgctccgg cggaacaacg cccttggtga
     1021 gcaggatatc gccgtagaag cggcgcccgc gcgtggcagg atagttggcc agcgcgtgca
     1081 gcaggtcggg gctgagcaag gggtcgaggc cgagcagcat gttccctccg gcgctttggg
     1141 cgagcgtagc attccatccc gagctgttga atcgcgaatc gcttgcggga gtagattgtt
     1201 ccggcgactg aatccgacga gaagcaggcg ccgccattca aaatgttcgc ggcgttgtac
     1261 gcgcaacatc ggctcgggca tcggcatctc gctggtgatc ttcctgctga cccgcaacac
     1321 ccagatcgtg catgccaagc tggcgggcca tgtcacgccg ttcaacgatg cgctgagcgc
     1381 cgtcgccccg tcgcacttct ggaacatggc aacgacgctc ggccgtgcgg cgctgaatgc
     1441 cgaggtgacc aagcaggcga gtgtcgtggc ctatgccaac gacttcaagc tgatgatgat
     1501 cgtggcgctg gtggcgttgc cgctgatctt cctgctgagg cgcgccaaag cgcagccggg
     1561 cgaggcggcg atcctcgagt agctgcggca gcaggcgccg gctcgtcgat cgcccagctc
     1621 gtggccgacg taacgtatgc ggttacttcg tgctaggaag ctgcatctca cacattgacg
     1681 cggcagcttg cgcagcgaag cctggccaat gagaataatc ggcgtgatcg gagcattcac
     1741 cgagccgtcg acggagcggg aatgcagtac gcgccaaagc gcataggctg agcacgatga
     1801 cattcaccgt caatgggatg aaatccaaga agctggtaag catggatatc gatcacgtca
     1861 gaggatgggc tgagttcatg gacagagcca tgatcatcag cctcatcgcc gtcatcatct
     1921 ccgccgcagt tttaggcgtc accacttggc tgtcgatcaa gttcaacggt gcggtgcgag
     1981 cccacgagag cgcagccttc gatcgataca aggccgaaat gggacggcat gccgcgcagc
     2041 tggaagagca agccgctgcg gcacgggaac ggaccggtga gctggagcag tctgccgcgg
     2101 acgccaacga acgcgcggca cgagcggccc gcgagagcgc gaccgccaac gagagggcag
     2161 tggagctcga gactgatgcg gcgcaggcca gaaaacgcgt cgtcgatttg gaaaaggccg
     2221 tcgaggatgc aagtacgcgt gccgcggaac caggaaggga agctgcggct ggaacggcgc
     2281 gccctgccga gggccagggt gcccctgaac gcgccgcgtc aaatcgcgac cagcagccgt
     2341 cgcagatcgt cgcaagcctg aggaagtatg ccggtaccaa agccgctgtg tatgtcctcg
     2401 aggaagcgcc cgacgcggca gccgtcggtt ccgccatcac tggctttctc accgacgccg
     2461 gctgggcccc cctgacatgg acgtggtcag gagtcggcgg catcctgggc gtggtcgtcc
     2521 tgatcaagga aggcagcgac ccggcgacgg acgaggcagc gtccggcatc ctggatgccc
     2581 ttcgctcggc cggcttcaac gcggcgaaag gaaattggcc ggcagactgg cgcagattcc
     2641 gcggcacgct caacggtccg caaacgcccg gcccgacaga ggcgcctatc cggatcgtca
     2701 tcggggcaaa ggcccgctga tcctacggct tctcgttcga ggctgcgccg ccctcaatgt
     2761 ccaggtgacg accgcttggc ctagctgcgc tggggcgaca atcctcgaat agccgaaggg
     2821 cgcgatccag ccacgccctg ctgtcgtttg ccaccagtgc tcccatgccg atacgatgtt
     2881 cgccctcgat cggagcatcc gcatgtcctc tcccagcctg gtgattcgca acggcaccat
     2941 cgtcgatggg tcgggcggag acccctatga ggccgacctc ggggtgatcg acggcaagat
     3001 cgtggcgatc ggcgggagca ttcccaaggg caccgaggag atcgacgcgc gcggcaagct
     3061 cgtcacgccg ggcttcgtcg acgtgcacac gcactacgac gcgcaggtga cctggagcga
     3121 tcggttgtcg ccctcatcct ggaacggggc cacgacggtt ctgttcggca actgtggcgt
     3181 cggcttcgcg ccgtgccacg aagaccagca cgacatgctt ataaacctga tggagggcgt
     3241 ggaagacatt cccgaagtcg tgctgagcga aggcctgccg tggaactggc acagcttccc
     3301 ggacttcctc gatgcgattg ccgcccgttc ctacgatgtc gacgtcgccg cccaggtgcc
     3361 gcatgccgcc ttgcgcgtct atgtgatggg cgagcgtggc gccaaccgcg agccggccag
     3421 cgagcaggac cgccggcgca tggcgcaact gacctccgaa ggcctgcgcg ccggggcgct
     3481 cggcttctcg acctcgcgca cgctcaatca ccgcgcggcc gacggccgcc acatcccgac
     3541 cttgcgcgcc gaggaagcgg agctgactgc gatcgcccat gccctgcgcg ataccggcac
     3601 cggctggatg cagatcgtgt cggacttcga ggaccaggac ggcgagatcg gcctgttccg
     3661 ccggctggcg
//
LOCUS       DASWGA010000040         1653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_635181, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000040 DASWGA010000000
VERSION     DASWGA010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_635181"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..1304)
                     /locus_tag="VF991_00795"
     CDS             complement(147..1304)
                     /locus_tag="VF991_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008833808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX9554997.1"
                     /translation="MRIVAIRDIVSPIRSNIANAYIDFSQMTASVVAVETDYKVEGKP
                     VIGYGFNSNGRYAQHGLLNERFIPRLRQAKPDSLLDDEGLIDPAKCWAAMMANEKPGG
                     HGERSVSVGVLDMALWDALAKAKRAPLWKLLADRYNGGKYDDKAWVYAAGGYYYPGKD
                     LDGLQDEMKHYLDLGYACVKMKVGGVPLAEDLKRIEAVLKIVGSGDRLAVDVNGKFDL
                     PTAIAFGKAIEAYGLRWYEEPLDPLDYLAHAALATQYAPPLATGENLFSMRDARNLVR
                     HGGLRPDRDILQYDPALSYGLVEYLRTIDMLKANGWSPRRCVPHGGHQFALNIAVGLQ
                     CGGNESYPQVFAPFGGFADDCAVVDGKVALPDAPGIGFERKADLWAVMKAV"
     gene            complement(1315..>1653)
                     /locus_tag="VF991_00800"
     CDS             complement(1315..>1653)
                     /locus_tag="VF991_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9554998.1"
                     /translation="QGVALVVYLIADGLTSLYLASILFGLFQGGIVPSYAIIVREYFP
                     PREAATRVGFAVSVTVVGMALGGWMGGMLFDMTGSYRAAFINGIAWNVLNAAIAAWLL
                     MRQSRHAAAA"
BASE COUNT          281 a          539 c          555 g          278 t
ORIGIN      
        1 gattgttctc aagacgatgg ccgggggtgt cgtgcttatc atgatgttgc cgctcgctgg
       61 ctgccccggc attcccaatg atggccgcta ccaagatcac gacggcggcc ggagcaatac
      121 ccgcgccgag gcgccgtccg ctccgctcac acggctttca tgacggccca caggtcggcc
      181 ttgcgctcga agccgatgcc gggcgcgtcg ggcagcgcca cttttccgtc gaccacggcg
      241 cagtcgtcgg cgaagccgcc gaacggcgcg aagacctgcg ggtaggattc attgccgccg
      301 cattgcaggc cgacggcgat gttgagcgcg aactggtggc cgccatgcgg cacgcaccgt
      361 cgcggtgacc agccgttggc cttcagcata tcgatcgtgc gcaggtactc gaccaggccg
      421 taggacaggg cggggtcgta ctgcaggata tcgcggtcgg ggcgcagccc gccatggcgc
      481 acgaggttgc gcgcgtcccg catggagaac agattttcgc cggtggcgag cggcggggcg
      541 tactgggtgg ccagagctgc atgcgccaga tagtcgagcg gatcgagcgg ctcctcgtac
      601 cagcgcaggc cataggcttc gatcgccttg ccgaaggcga tggcggtcgg cagatcgaac
      661 ttgccgttga cgtcgaccgc cagccgatcg cccgagccca cgatcttcag caccgcctcg
      721 atgcgcttga ggtcctcggc gaggggcacg ccacccacct tcatcttcac gcaagcgtaa
      781 cccaagtcga gatagtgctt catctcgtcc tggagcccgt cgaggtcctt gccgggatag
      841 tagtagccgc cggcagcgta gacccacgcc ttgtcgtcgt atttcccgcc gttgtagcgg
      901 tcggccaaaa gcttccacag cggcgcccgc ttggccttgg ccagcgcatc ccacagcgcc
      961 atgtcgagca cgcccaccga caccgagcgc tcgccgtggc cgcccggctt ttcgttggcc
     1021 atcatggcgg cccagcactt ggcgggatcg atcagtcctt cgtcatcgag cagcgagtcg
     1081 ggcttggcct gcctgagccg cgggatgaag cgctcgttca aaagcccgtg ctgggcgtag
     1141 cggccgttgg agttgaagcc gtagccgatc accggcttgc cctcgacctt atagtcggtc
     1201 tcgaccgcca ccacgctcgc cgtcatctgg ctgaagtcga tataggcgtt ggcgatgttg
     1261 gagcggatcg gcgagacgat gtcgcggatg gcgacgatgc gcatggtttc tccttcaggc
     1321 cgccgccgcg tggcggcttt gccgcatcag cagccaggcc gcgatggcgg cattgagaac
     1381 attccaggca ataccattga tgaaggcggc gcggtacgag cccgtcatgt cgaacagcat
     1441 gccgcccatc cagccgccca gcgccatgcc gacgacggtg acggagacgg cgaagcccac
     1501 gcgcgtggcg gcctcgcgcg gcgggaagta ctcgcgcacg atgatggcgt aggagggcac
     1561 gatgccgccc tggaacaggc cgaacaggat cgaggcgagg tagagcgagg taagcccgtc
     1621 ggcgatcagg tagacgacca gggccacgcc ttg
//
LOCUS       DASWGA010000041         1636 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_763294, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000041 DASWGA010000000
VERSION     DASWGA010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_763294"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..633)
                     /locus_tag="VF991_00805"
     CDS             complement(184..633)
                     /locus_tag="VF991_00805"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9554999.1"
                     /translation="MRWLSLLIASIAIALPGAAFALPQPDAEAAYARGDYATAFKIWL
                     PLAEQGSSQAQLNIARMYERGEWVAQDKQAAMEWYRRAADQGARDGTMANGSTTSAVP
                     QATSPGMPPSSASYPRPTSYPAPYPVVVPIARPVFVPVFRIHHHRRH"
     gene            complement(720..971)
                     /locus_tag="VF991_00810"
     CDS             complement(720..971)
                     /locus_tag="VF991_00810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555000.1"
                     /translation="MNAYSALADLFRRRPNKAKAVPDLRQDADQPAHLVPPLDAEAQP
                     PGFEDALEVQALGYRDRLAMVRGQRRRAIDPVWTLARNR"
     gene            1187..>1636
                     /locus_tag="VF991_00815"
     CDS             1187..>1636
                     /locus_tag="VF991_00815"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9555001.1"
                     /translation="MHRIVVVGGGFAGLWSAVGAARRRDELGIAAADLEITLANRDAF
                     HAIRVRNYEADLSNVRVALDDVLDPIGVRHIVGNVDNIDLNGHEVGVTTPHGRKVLPY
                     DRLVIAAGSEVAKPAVPGLAEHAFSVDTFDAATRLDRHIAGLTGVAVG"
BASE COUNT          264 a          556 c          566 g          250 t
ORIGIN      
        1 gcattaaaag ttccggcaca atgcaacttc atgtgccggc ttgacgggcg gtcgggcgtg
       61 cctggggggc gtaagggggg cgtgacgggc gccgacgcct cagaggtcga cgcgctcctc
      121 tcccaccgcc ttccactcct ccatgttgaa gcgcccggct ggccgtcttc cggccgctcc
      181 cgatcagtga cggcgatggt ggtggatgcg gaagaccggc acgaagaccg gacgcgcgat
      241 gggaacgaca acaggatacg gcgcaggata ggacgtcggc cgcggatagc tcgccgacga
      301 cggcggcatg ccgggtgatg tcgcctgggg aacggcgctc gtcgtcgaac cgttggccat
      361 cgtgccgtcg cgggcgccct ggtcggcggc cctgcggtac cattccatcg ccgcctgctt
      421 gtcctgggcg acccattcgc cgcgctcgta catgcgggcg atattgagct gcgcctgcga
      481 cgagccttgc tcggcgagcg gcagccatat cttgaaggcg gtggcatagt cgccgcgcgc
      541 gtaggcggcc tccgcgtcgg gctgcggcag cgcgaacgcc gcccccggca gcgcaattgc
      601 aatcgaagcg atgagcaggc tcagccaacg catggcggca tccccctggc cggcagcctg
      661 tcacaaatcg ccggccctcg cgagggctcg ccgcggccac gcacggccgc cgaggcgggc
      721 tacctgttcc tggccagcgt ccagaccgga tcgatcgcgc gccgccgctg gccgcgaacc
      781 atcgccagcc ggtcacggta gcccagcgcc tggacctcca gggcatcctc gaaccccggg
      841 ggctgagcct cggcgtccaa gggcggcacc aggtgcgccg gctggtcggc atcctggcga
      901 agatcgggca ccgcctttgc cttgttcggg cgacggcgga aaagatcggc aagagctgaa
      961 tatgcattca tcggatgact ccgagccact gtggcgggct gttcttaggc ggatgcaagg
     1021 ccgaaagatg tgactttccg cacacaacgg acctacgctg cggcatggcc cgccatcgcc
     1081 tcagcccggc ggccggcacg gttcacggca tcttctcgcg cggggccgat cgatacgata
     1141 aaggcggaag cgcgctcgat gtgccattag cgccgaggag agtggcatgc accgtatcgt
     1201 cgttgtcggc ggcggcttcg ccgggttgtg gagcgctgtc ggcgccgcac gccggcgcga
     1261 cgaactcggg atcgccgcag cggacctcga gatcacactc gccaaccgcg acgccttcca
     1321 cgcgatccgg gtgcgcaact acgaggctga tctgagcaat gtcagggtcg cactggatga
     1381 cgtgctcgat cccatcggcg ttcgccatat cgtgggaaac gtcgacaaca tcgacctgaa
     1441 cggccacgag gtcggggtga cgacgccgca cggccgcaag gtcctgccgt acgacaggct
     1501 ggtcatcgcc gccggcagcg aggtcgccaa gccagccgtc ccgggcctcg cggagcatgc
     1561 cttcagcgtc gacacgttcg atgcggcgac ccggctcgat cgccacatcg ccggcctgac
     1621 gggcgttgcg gtcggc
//
LOCUS       DASWGA010000042         2396 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_763501, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000042 DASWGA010000000
VERSION     DASWGA010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_763501"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1631)
                     /locus_tag="VF991_00820"
     CDS             complement(<1..1631)
                     /locus_tag="VF991_00820"
                     /inference="COORDINATES: protein motif:HMM:NF012531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HEX9555002.1"
                     /translation="MSAQDFVRDYKSGVAKLTAAYGYNPAQEIDSCGVGLVVALDGKR
                     RRDVVAAGIDALKAVWHRGAVDADGKTGDGAGIHVEIPQDFFRDHVRDSSGEMPEVGR
                     IAVGMVFLPRTDLHAQERCRTIVETEILRFGHTILGWRQVPVDTSAIGEKANATRPEI
                     EQILIGRGDAKLDNREFEKQLYILRRRMEKAAIAENIGEFYVCSLSCRSVVYKGMFLA
                     EHLSAFYPDLLDERFTSRFAIFHQRYSTNTFPQWRLAQPFRVLAHNGEINTLLGNVNW
                     MKSHEARLAHDDFGRAIEDLKPIIQPDASDSSALDNVFELLVRGHRNLPMVKLMMIPE
                     AVGANPNVPPKHRALYHYLNGVMEPWDGPAAIAAVAGKWALVGLDRNGLRPMRYVRTS
                     DDLLIAGSEAGMVPQDEAKIVEKGRLGPGEMLAVDMDQPALYKDRELKDILAETHDYA
                     QWTERTVELDSLIKQETPAAEHFAPDELRRRQFSVGWSIEDLELILHPMVEDGKEAVG
                     SMGDDAPLAVLSDTYRGMHHYFRQNFSQVTNPPIDS"
     gene            complement(1693..1875)
                     /locus_tag="VF991_00825"
     CDS             complement(1693..1875)
                     /locus_tag="VF991_00825"
                     /EC_number="5.3.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF001966.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase"
                     /protein_id="HEX9555003.1"
                     /translation="MPMINVQMFEGRTTEQRRKLAKELTEGTCRALGCTPDAVQIILT
                     DIKKENWAEAGKLFSD"
     gene            complement(1896..>2396)
                     /locus_tag="VF991_00830"
     CDS             complement(1896..>2396)
                     /locus_tag="VF991_00830"
                     /inference="COORDINATES: protein motif:HMM:NF021361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEX9555004.1"
                     /translation="LAVLFVLLLSFETTGAARAQSEPDPVAVREAQTLMNRFGIDALA
                     KQQMAAASQQLRSMVQSIDADKEKEELMAEYARLAEKEIETRLPKYFEEVTLIYVRNF
                     TLDELKELNAFYDSCLGQKLVEKTPELFKESLDLSQRLGVDVVQEVWRLMLPELRKRG
                     IKTAPN"
BASE COUNT          409 a          749 c          768 g          470 t
ORIGIN      
        1 gagtcgatcg gcgggttggt gacctggctg aagttctggc ggaaataatg atgcatgccg
       61 cgataggtgt ccgacagcac cgcgagcggc gcgtcgtcgc ccatcgagcc cacggcttcc
      121 ttgccgtcct cgaccatggg atggaggatc aactcgagat cctcgatcga ccagccgacg
      181 gagaattgcc ggcggcgcag ctcgtcgggc gcgaaatgct cggcggcggg ggtttcctgc
      241 ttaatcaaag agtccagctc gacggtgcgc tccgtccact gggcgtagtc gtgggtctcg
      301 gcgagaatgt ccttgagctc gcggtccttg tagagcgcgg gctggtccat atcgacggcc
      361 agcatctcgc cggggcccaa ccggcccttc tcgacgatct tggcctcgtc ctgcggcacc
      421 atgccggcct ccgagcccgc gatcagcagg tcgtcggagg tgcgcacata gcgcatcggc
      481 cgcagcccat tacggtcgag cccgaccagc gcccacttgc cggcgaccgc ggcgatggcg
      541 gccggaccgt cccacggctc catgacgccg ttcaggtagt gatagagcgc gcgatgcttg
      601 ggcggcacgt tgggattggc gccgacggcc tcgggaatca tcatcagctt gaccatcggc
      661 aggttgcgat ggccacgcac caggagctcg aagacattgt cgagggccga ggagtcggag
      721 gcgtcgggtt ggatgatggg cttcaggtcc tcgatcgcgc ggccgaagtc gtcatgcgcc
      781 agccgcgcct cgtggctttt catccagttg acgttgccca agagcgtgtt gatctcgccg
      841 ttgtgcgcca acacgcggaa cggctgcgcc agccgccatt gcggaaaggt attggtcgaa
      901 tagcgctgat gaaagatggc aaaacgcgag gtgaaccgct cgtccaacag gtcgggatag
      961 aaggccgaca gatgctcggc taaaaacatg cccttgtaga cgaccgagcg gcagctaagc
     1021 gagcagacat agaactcgcc gatgttctcg gcgatcgccg ccttctccat gcgccggcgc
     1081 aggatgtaga gctgcttctc gaactcgcgg ttgtcgagct tggcatcgcc gcggccgatc
     1141 aggatctgct cgatctccgg ccgtgtggcg ttggccttct cgccgatcgc cgaggtgtcg
     1201 accggcacct ggcgccagcc caggatggtg tggccgaaac gcaggatctc ggtctcgacg
     1261 atggtgcggc agcgctcctg ggcgtgcagg tcggtgcgcg gcaggaacac catgccgacg
     1321 gcgatgcggc cgacctcagg catctcgccg ctcgaatcgc ggacgtggtc gcggaagaag
     1381 tcctgcggga tctcgacatg gatgcccgcg ccgtcgccgg tcttgccgtc ggcatcgacg
     1441 gcgccgcgat gccacactgc cttcagcgca tcgatgccgg ccgccaccac gtcgcggcgg
     1501 cgcttgccgt ccagcgccac gaccaggccg acgccgcagg agtcgatctc ctgggcgggg
     1561 ttgtagccgt aggcggcggt gagcttggcg acgccggact tgtagtcgcg gacgaaatct
     1621 tgtgcggaca tgattcaatt cctctgaccc gtcatccctc gacttcgctt cgctcgggat
     1681 gacggagggg gattaatccg aaaacagctt cccggcctcg gcccagttct ctttcttgat
     1741 gtcggtcagg atgatctgca ccgcgtcggg cgtgcagccg agcgcgcggc aggtgccctc
     1801 ggtgagctcc ttcgccagtt tgcggcgctg ctcggtggtg cggccctcga acatctggac
     1861 gttgatcatc ggcatggtct tgtctcctct cgacttcaat tgggggcagt cttgatgccg
     1921 cgcttccgta gctcgggaag catcaagcgc cagacttctt ggaccacatc gacgcccaag
     1981 cgttggctca agtccaagct ctccttgaag agttcgggcg tcttctccac cagcttctgt
     2041 ccaaggcacg aatcgtagaa agcattcaat tccttgagtt cgtccaacgt gaaattgcgg
     2101 acatagatga gcgtgacctc ctcgaaatat ttcggcaggc gcgtctcgat ctccttttcc
     2161 gccagccggg catactcggc catcagctct tccttttcct tgtctgcgtc gatggactga
     2221 accatcgacc tcaattgctg cgatgctgcc gccatctgtt gcttggcgag agcatcgatg
     2281 ccgaatctgt tcatcagggt ttgcgcctct cgcacggcca cggggtccgg ctcggactgt
     2341 gcccgagccg caccggtcgt ctcgaaagac agcaagagga cgaataagac tgccag
//
LOCUS       DASWGA010000043         3279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1648834, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000043 DASWGA010000000
VERSION     DASWGA010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1648834"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..574
                     /locus_tag="VF991_00835"
     CDS             44..574
                     /locus_tag="VF991_00835"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003494378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9555005.1"
                     /translation="MSGLIVRASTEADVARCAEIYGYHVLHGTASFEVDPPDLAEMKK
                     RRAAVLDLGLPHLVAERDGKVLGYAYAGNWRPRPAYKYSVEDSIYIDKDAVGQGVGRA
                     LLPPLIEQCTQLGKRQMVAVIGDSAQTASIRLHASCGFEMVGTLKSIGFKFGRWLDSV
                     LMQRALGTGDMEPPRA"
     gene            567..728
                     /locus_tag="VF991_00840"
     CDS             567..728
                     /locus_tag="VF991_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555006.1"
                     /translation="MLEARIGPAKDKLGSVKSPKSVDFIDALARSPVAKVLKKTLREP
                     CWAGRERKI"
     gene            728..1633
                     /locus_tag="VF991_00845"
     CDS             728..1633
                     /locus_tag="VF991_00845"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9555007.1"
                     /translation="MGDWLRRLPPNVQGALWLVSGGFIFTATSAMIRLLSSQIESVQT
                     AFFRAVISVILLLPMIAAGRVQPWHSKRLAGHFWRTAMGTASMVLGFYAVSMLPLADA
                     TAIAFSQPLFSVVVAAAIAGEKVRWRRWSATIIGFAGVLVMVRPGEGSLQLGALVALA
                     NAAAVAVSILLVKRLSDSETPLMILTQFAIFSTVLLALPAILVWRWPDLWGWILAVGI
                     ALSATIGQYFWVQAFKSGEMSAVAPFEYMRLPFAVFVGWLVWGEMPVIWTYIGAAIVI
                     GSALYIAHREHQLARERRRMAVTPS"
     gene            complement(1630..1980)
                     /locus_tag="VF991_00850"
     CDS             complement(1630..1980)
                     /locus_tag="VF991_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008933658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HEX9555008.1"
                     /translation="MNQSQLLEDETRVRAGFWRKVRQTLGKVPFTEDAVAAFHCATDP
                     ATPLAIRATLFGALAYFVMPFDAIPDFLFGLGFTDDAAVLIAAFTAARSHITESHREK
                     ARAWLLTAHVGQNS"
     gene            2061..2822
                     /locus_tag="VF991_00855"
     CDS             2061..2822
                     /locus_tag="VF991_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008877897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HEX9555009.1"
                     /translation="MNVKGQAAIVTGGASGLGGATVSALAAAGAKVAIFDVQDELGEK
                     KAKEVGGLYVKTNVADAANTEASVKAVVERLGVPRVVVNCAGIGRAARTLSKSGPHDL
                     DMFSQVIQVNLIGTFNVIRLASWAMSQADPLEDGERGVIINTASVAAFEGQIGQAAYA
                     ASKGGVVGMTLPIARDLSSLGIRVCTIAPGLFLTPMMMGLSAEAQKSLGAQVPFPSRL
                     GDPKEYAQLAMQIVENPMLNGETIRLDGAIRMAPR"
BASE COUNT          504 a         1082 c         1122 g          571 t
ORIGIN      
        1 cgctataaca gcccgggatg aacggacgcg ggaacaatca gacgtgagcg gattgatcgt
       61 gcgggcctcg accgaggccg acgtggcgcg ctgcgccgaa atctacggct atcacgtgct
      121 gcacggcacg gcctcgttcg aggtcgatcc gcctgacctt gcggaaatga agaagcgccg
      181 cgccgcggtg ctcgatctcg gcctgccgca tctcgtggcc gagcgcgacg gtaaggtcct
      241 gggttacgcc tatgccggca actggcgacc caggccggcc tacaaatact cggtcgagga
      301 ttcgatctat atcgacaagg acgcggtcgg gcagggcgtc ggcagggcgc tgctgccgcc
      361 tttgatcgag cagtgcaccc agctcggcaa acgccagatg gtggcggtga tcggcgattc
      421 ggcgcagacg gcgtcgatcc gactgcacgc gtcctgtggt ttcgaaatgg tcggaacgct
      481 gaaaagcatc ggcttcaagt tcggccgctg gctcgactcg gtgctcatgc agcgcgcact
      541 agggacaggg gacatggagc caccgcgtgc ttgaggcccg tattggcccc gccaaggaca
      601 agctgggcag cgtcaagtct cccaagtcgg tcgacttcat cgacgccctg gcgcgaagtc
      661 ccgtcgccaa ggtgctgaag aagaccttgc gcgagccctg ctgggccggc cgcgagcgga
      721 aaatatagtg ggcgactggc tgcgccgcct gccgcccaac gtgcaaggcg ccctgtggct
      781 ggtgtcgggc ggcttcatct tcaccgccac cagcgcgatg atccgcctgc tctcgagcca
      841 gatcgaaagc gtgcagacgg ctttcttccg cgccgtcatc tcggtgatcc tgctgctgcc
      901 catgatcgcc gccggccggg tgcaaccgtg gcactccaag cgcctggccg gccatttctg
      961 gcgcaccgcc atgggcaccg cctcgatggt gctgggcttc tatgccgtct ccatgctgcc
     1021 gctggccgac gccaccgcca tcgccttctc ccagccgctg ttctcggtcg tggtggcggc
     1081 ggcgatcgcc ggcgagaagg tgcgctggcg gcgctggagc gccaccatca tcggctttgc
     1141 cggcgtgctg gtgatggtgc ggccgggcga gggcagcctg cagcttggcg ccctggtggc
     1201 gttggccaac gccgccgcgg tcgccgtctc gatcctgctg gtcaagcggc tgtcggattc
     1261 cgagacgccg ctgatgatcc tgacccagtt cgcgatcttc tcgacggtcc tgctggcgct
     1321 gccggcgatt ctggtgtggc gctggcccga tctctggggc tggatcctcg cggttggcat
     1381 cgcgctgtcg gccacgatcg gccagtattt ctgggtgcag gccttcaagt cgggcgagat
     1441 gtcggcggtg gcgccgttcg agtacatgcg cctgccgttc gcagtgttcg tgggctggct
     1501 ggtgtggggc gagatgccgg tgatctggac ctatatcggc gcggcgatcg tcatcggctc
     1561 ggcgctctac atcgcccatc gcgagcacca gcttgcccgc gaacgccgcc ggatggcggt
     1621 gacgccttct taggaattct gcccgacgtg tgccgtcaac agccaggccc gcgccttttc
     1681 gcgatggctc tcggtgatgt ggctgcgggc cgcggtgaag gctgcgatca gcaccgctgc
     1741 gtcgtcggta aagcccagcc cgaagagaaa atcggggatg gcgtcgaacg gcatcacgaa
     1801 ataggcaagc gcgccgaaca gggtggcgcg gatggccaat ggcgttgccg gatcggtggc
     1861 gcaatggaag gccgccacgg catcctcggt gaacggcacc ttgcccaggg tctggcgcac
     1921 cttgcgccag aagccggcgc gcacgcgggt ttcgtcttcc aggagttggg actggttcat
     1981 ggcctcaaag gtggcgatcc ggcgccgctt ggcaagggga gcggacctgc taaaaccgcc
     2041 ccggatcacg gaggacagca atgaacgtca agggtcaggc cgccatcgtt accggtggtg
     2101 catcgggatt gggcggcgcc acggtatcgg cgctggccgc ggccggcgcc aaggtcgcca
     2161 tcttcgatgt gcaggacgaa ctgggggaaa agaaggccaa ggaagtgggc ggtctctacg
     2221 tcaagaccaa tgtcgccgac gccgccaaca ccgaggcgtc ggtcaaggcc gtggtcgaga
     2281 gactcggcgt gcccagggtg gtggtgaact gcgccggcat cggccgcgcc gcccgcaccc
     2341 tctccaagtc gggcccgcac gacctcgaca tgttctccca ggtgatccag gtcaatttga
     2401 tcggcacctt caacgtcatc cgcctcgcct cgtgggcgat gagccaggcc gaccctctgg
     2461 aagacggcga gcgcggcgtg atcatcaaca ccgcgtcggt ggcggcgttc gagggccaga
     2521 tcggccaagc cgcctacgcg gcctccaagg gcggcgtggt cggcatgacg ctgccgattg
     2581 cgcgcgatct gtcgagcctc ggcatccgcg tctgcaccat cgcgcccggc ctgttcctga
     2641 cgccgatgat gatgggcctg tcggccgagg cgcagaagag tctcggcgcg caggtgccgt
     2701 tcccctcgcg gctgggcgat cccaaggaat atgcccagct cgccatgcag atcgtcgaga
     2761 accccatgct gaacggcgag accatccgtc tcgacggcgc catccgcatg gcgccgagat
     2821 gacagcgaag cggtcatccc gagtcgcgcg cttgccgtca caccgctggc cggcggcctg
     2881 ggcggcatcc tgaccgacga gtgccggcgc agcctgccgc cgcccggagc gccgcccggc
     2941 acctgaccct gcgtcttggc tcgttcaatt cggctcgccg gtcgcatcgc gccttgccct
     3001 tgccggcccg gcggagtatc gcagtcagat cccctcgcaa cctcaaccct tcgcgcgcgg
     3061 gtgaggaatt ttcctagagc gtgtcacgtc gcctgccgtc cgcggtcctg cgcgtgcttg
     3121 agagtgcctc gctgacgagg ccgcgcccgc cggtcggctc tcgtcatttc agggtgagcg
     3181 aggccgacat ggaagacaac gcttctcgct ggtacgaggc ggcgtttgcg ccgccgccaa
     3241 gctacttcgc ctggccgttc atcgcgcttg ccgcggcgg
//
LOCUS       DASWGA010000044         5528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_890478, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000044 DASWGA010000000
VERSION     DASWGA010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5528
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890478"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..1357)
                     /locus_tag="VF991_00860"
     CDS             complement(23..1357)
                     /locus_tag="VF991_00860"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HEX9555010.1"
                     /translation="MVSFLVVIPVLMGAAAVGIETGQLYRTKRQMQGAADAAALAGSV
                     DRTAGKSLTTITSTARYEAQRNGFQNGVGSIAVTVNAPPTSGTNITTAGAVEVIITKP
                     QSFSLGAVLTSWLGGTSGSFTMSTRSVAAQKSSPSAEGCLVALTSANEQGVSFTSFTH
                     FNADCTIISNGSSTATGSTASIYLASFTSASLRTIWTRGRFVADVPGNVSLTNAAQEN
                     QTTVAVDPYASLPTPAPGACPSPGYVAPTSGDANPTPGTYCPGLTLQNLTNVNFSPGL
                     YYITNGDLYINNVNNIRCPTCTTAAGVTFVLTQNTGNASDIGGVYLGSANNATLNAPS
                     ATVASPPLYAGVLFYQDRAATTGTMASTSKTFTVRTLNNATLTGAIYFPNNKIDIASL
                     NNGGSSSSGCTVYIGRYIKFTDYNNNYITGCAAMGTVPVSIIQPTTIGRVFE"
     gene            complement(1539..1775)
                     /locus_tag="VF991_00865"
     CDS             complement(1539..1775)
                     /locus_tag="VF991_00865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555011.1"
                     /translation="MPELAVVFEMTAIELTCLPYRQQALENLADRSESPAVGALVNAL
                     RQTENTAHRWPGLAAADARHGALGRAILSMLSLT"
     gene            complement(1847..2797)
                     /locus_tag="VF991_00870"
     CDS             complement(1847..2797)
                     /locus_tag="VF991_00870"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX9555012.1"
                     /translation="MDLVDSEKSFTVVVAIATFVAFWALCTAFVWQPPIEARLKALRT
                     RRMKTRSEQTRSAKPSPKAASLGLLRTLADRMNLLRGAAADQTTRKLRQAGFHSRDAA
                     VVFMFIKLALPLVLGFLMILLTSPSSVLEVQEDMILPLCIGAVLAGFVFPGVYIKNVA
                     VKRREILNRMLPEGLDLLTICVEAGLSVDAAFRRVAKEMAVPMPELAQEFEMTAIELT
                     YLPDRQQALENLADRSESPAVGALVNALRQTEKYGTPLANALRVLSQEFRQTRASKAE
                     EKGARMPALMTVPLMVFLLPTLITVLLAPAILSMLATTSS"
     gene            complement(2807..3817)
                     /locus_tag="VF991_00875"
     CDS             complement(2807..3817)
                     /locus_tag="VF991_00875"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX9555013.1"
                     /translation="MTADAGGHGLDLETVAMLIAAGMALTFIALCVVFSGFLAERRLR
                     DRLEDIETRALTGSRSLQMATLRRVERAGSLPTLDKILWRWFPNGSTIRQRLQTSGMN
                     LTLGDYAFISIAIAVAMAFLLYLVLDMAPGVALAGSLLIGIGMPNVWVGWKAKKRGQR
                     FNLLFPEAIDLIVRALRAGLPVGEAIANVARDIKEPVGSVFQRAQHEMQLGVPIEAAL
                     WRVAKTVQTDEFNFLIVAMSIQRDTGGNLAETLANLSTLLRARQQLRLKIRAFTSEAR
                     TTMLIMAGLPFLVGGGLFLASPSYMAPLLYTETGQMVAAAAGCSMGVGIFIMKRIATI
                     RV"
     gene            complement(3814..5514)
                     /locus_tag="VF991_00880"
     CDS             complement(3814..5514)
                     /locus_tag="VF991_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX9555014.1"
                     /translation="MPAEGRPGAAVGPVDRTARIAAAAAALHEAVTPRLREMMKAGAP
                     AGEVSRQAGLLAQLHFRNSGVLLAPLELRGYVAEVLRPVLPASNFSAPVALADEAAEA
                     AAAPAEIAESAVIAPTAAPLMPMAPVRPVELAKPEAADKSASGLSRSKIEQARRTVQP
                     LVMSRIDLAAAVSLPRKELVRQLEGLVIELLVEHRLQLNRPEQVDLVYQLVNDMMGLG
                     PLEPLLEDDGITDIMINGPKQIYIERFGKLDLTSITFEDNAHLLNICNRIVSRIGRRV
                     DESSPICDARLLDGSRVNIIIPPLAIDGASVSIRKFGKRQIGFDQMAQQGNISPAMAT
                     LLRIAARCRLNLIVSGGTGSGKTTMLNALSGMIDNGERVVTIEDAAELRMQQPHVVRL
                     ETRPANLEGNGEVSMRDLVKNALRMRPDRIILGEVRGPEAIDLLQAMNTGHDGSMGTL
                     HANRPREALTRLENMVTMGVASLPPKAIRMQISGSLQLIVQISRMRDGIRRVTHITEV
                     MGMEGDVIITQDLFTYEFKGETADGKLAGTFKSSGLRPYFLPRAAYYGLDKVLMEAMA
                     "
BASE COUNT          893 a         1768 c         1927 g          940 t
ORIGIN      
        1 atcgccacgc atggccccgc tcctactcga agaccctgcc gatggtcgtg ggctgtatga
       61 tggagactgg aaccgtgccc atcgcggcgc agccggtgat atagttgttg ttgtagtccg
      121 tgaacttgat gtagcggccg atgtacaccg tgcagccgct gctgctcgag ccgccgttgt
      181 tcaggctcgc aatgtcgatc ttgttgttgg gaaagtagat ggcgccggtc agcgtggcgt
      241 tgttgagcgt gcggacggtg aaggtcttcg atgtcgacgc catggtgccg gtcgttgccg
      301 cgcggtcctg atagaacagg acgccggcgt agagcggcgg cgacgccacg gtggccgacg
      361 gcgcattgag ggtcgcgttg ttcgccgagc cgaggtacac cccgccgatg tcggaggcgt
      421 tgccggtatt ctgggtgagc acgaaggtca ccccggccgc ggtcgtgcag gtcgggcatc
      481 ttatgttgtt gacgttgttg atgtagaggt cgccgttggt gatgtagtag aggccgggcg
      541 agaagttgac gttggtgagg ttttgcagcg tcagcccggg gcaataggtg ccgggggtcg
      601 ggttcgcgtc gccgctcgtc ggcgcgacgt acccagggga ggggcaggcg cccggcgccg
      661 gcgtcggcag gctggcgtag ggatcgaccg ccaccgtcgt ctgattctcc tgggcggcgt
      721 tggtgagcga cacgttaccg ggcacatcgg cgacgaagcg gccgcgcgtc catatcgtcc
      781 tcagcgacgc gctggtgaag ctcgccaggt agatcgacgc ggtcgagccg gtcgcggtcg
      841 acgagccgtt cgagatgatc gtgcagtcgg cgttgaagtg ggtgaacgag gtgaagctca
      901 cgccctgctc gttggcgctg gtgagggcca ccaggcagcc ctcggcgctg ggtgagctct
      961 tctgggcggc caccgagcgc gtgctcatgg tgaagctgcc gctcgtgccg ccgagccagc
     1021 tggtgagcac ggcgcccagg ctgaagctct gcggcttggt gatgatcacc tcgacggcgc
     1081 cggcagtggt gatgttggtg cccgaggtcg gcggcgcgtt gaccgtcacc gcgatgctgc
     1141 ccacgccgtt ctggaagccg ttgcgttgcg cctcgtagcg ggccgtcgac gtgatcgtcg
     1201 ttaggctctt gccggccgtg cgatcgaccg agccggcaag ggccgcggcg tcggcggcgc
     1261 cctgcatctg ccgcttggtg cggtagagct ggccggtctc gatgccgacg gcggcggcgc
     1321 ccatcagcac cggaatgacg acgagaaagc tgaccaccga ccccgaccga ttgcggccaa
     1381 gccgctgcca cgtcgcgcgt gcagaacgga ctatgcgcaa tgccccccgc atcatcatgt
     1441 ctgcctcctc ttcaatcaat gcgtgtcctt gaaagacacc aaatcgattt caactgaact
     1501 tttagaaata tgcctcaagt actagaaatt tatatcattt atgtcaagga gagcatcgac
     1561 aaaatcgccc ggccaagagc accgtgacgg gcatcggcag ccgcaagacc aggccagcgg
     1621 tgcgccgtat tttcagtctg acggagagca ttcaccaggg cgccaacggc gggcgactcg
     1681 gagcggtcgg ccaggttctc cagggcctgc tggcgatacg gcagacaagt gagctcgatc
     1741 gccgtcatct cgaacaccac ggcgagctcg ggcatcgggc cagccatttg cctggccacc
     1801 cggcggaacg cggcatcgac gccgaggcct gcttcgacac agatcgtcag gaggaggtcg
     1861 tggccagcat cgacaaaatc gccggggcca ggagcaccgt gatgagcgtc ggcaggagga
     1921 agaccatgag ggggacggtc atcagggcgg gcatgcgggc gcccttctcc tcggccttgg
     1981 aggcccgggt ctggcggaac tcctggctga ggacgcgcag cgcattggcc agcggtgtgc
     2041 cgtatttttc ggtctgacgg agagcattca ccagggcgcc aacggcgggc gactcggagc
     2101 ggtcggccag gttctccagg gcctgctggc gatccggcaa ataggtgagc tcgatcgccg
     2161 tcatctcgaa ctcctgggcg agctcgggca tcgggacggc catttccttg gccacccggc
     2221 ggaatgcggc atcgacgctg aggccggctt cgacacagat cgtcagcagg tcgaggccct
     2281 cgggcagcat tcggttcagg atctcgcgcc gcttgacggc gacgttcttg atatagaccc
     2341 cggggaaaac gaagcccgcc agcacggcgc cgatgcagag cggcaggatc atgtcctcct
     2401 gcacctcgag cacgctcgac ggcgaggtca gcaggatcat cagaaagccc aacaccagcg
     2461 gcaaggcgag cttgatgaac atgaagacga cggcggcgtc gcgcgagtgg aagccggcct
     2521 ggcgcagctt gcgcgtggtc tggtcggccg ccgcgccgcg cagcaggttc atgcggtcgg
     2581 ccaaggtgcg cagcaagccg agcgacgccg ctttcggcga cggcttggcc gaccgcgtct
     2641 gctcgctgcg ggtcttcatg cgacgcgtcc gcaaggcctt gagccgcgcc tcgatcggcg
     2701 gctgccagac aaacgccgtg cacaacgccc agaacgccac gaaggtggcg atggccacca
     2761 cgaccgtgaa gctcttctcg gagtcgacga ggtccatggc ttcccctcag accctgatgg
     2821 tcgcgatccg cttcatgatg aaaatgccga cgcccatgct gcagccggcg gccgccgcca
     2881 ccatctgacc ggtttcggtg tagagcagcg gcgccatgta gctcggcgac gccaggaaca
     2941 ggccgccgcc gaccaggaac ggcaggccgg ccatgatcag catcgtcgtg cgcgcctcgg
     3001 aggtgaaggc gcggatcttc aggcgaagct gctggcgggc gcgcaacaga gtgctcaggt
     3061 tggccagggt ctcggccagg ttgccgccgg tgtcgcgctg gatcgacatg gcgacgatca
     3121 ggaagttgaa ctcgtcggtc tgcaccgtct tggcgacgcg ccacagcgcc gcttcgatcg
     3181 gcacgccgag ctgcatctcg tgctgggcac gctggaaaac gctgcccacc ggttccttga
     3241 tgtcgcgcgc cacattggca atcgcctcgc ccaccggcag gccggcccgc aaggcgcgga
     3301 cgatcaggtc gatcgcctcg ggaaacagca ggttgaaccg ctggccgcgc ttcttcgcct
     3361 tccagccgac ccacacgttg ggcatgccga tgccgatcag cagcgagccg gcgagcgcga
     3421 cgcccggcgc catgtcgagc accagataga gcaggaaggc catcgcaacg gcgatcgcga
     3481 tcgagatgaa ggcatagtcg cccagggtga ggttcattcc cgaggtctgg agccgttggc
     3541 gaatcgtgct gccgttgggg aaccagcgcc acaggatctt gtcgagcgtc ggcagacttc
     3601 ccgcccgctc gacacgccgc agcgtcgcca tctgcaggct gcgcgagccg gtcagcgcgc
     3661 gcgtctcgat gtcctcgaga cggtcgcgca gacggcgctc ggcaaggaag ccgctgaaca
     3721 ccacgcagag cgcgatgaac gtcagcgcca tgccggcggc gatcagcatc gccaccgtct
     3781 cgagatcgag gccgtgcccg ccggcgtcgg ccgtcatgcc atcgcctcca tcaggacctt
     3841 gtcgaggccg taataggcgg cgcgcggcag gaagtacggc cgcagccccg agctcttgaa
     3901 ggtgccggcg agcttgccgt cggccgtctc gcccttgaac tcgtaggtga agagatcctg
     3961 ggtgatgatg acatcgccct ccatgcccat gacctcggtg atgtgcgtca cgcggcggat
     4021 gccgtcgcgc atgcggctga tctgcacgat cagctgcagc gagcccgaga tctgcatgcg
     4081 gatcgccttg ggcggcaggc tggccacgcc catggtcacc atgttctcga gcctggtcag
     4141 cgcctcgcgc gggcggttgg cgtgcagcgt gcccatcgag ccgtcgtggc cggtgttcat
     4201 ggcctgcaac aagtcgatcg cctcgggccc gcgcacctcg cccaggatga tgcgatcggg
     4261 ccgcatgcgc agcgcgttct tcaccagatc gcgcatgctg acctcgccgt tgccttcgag
     4321 gttggcgggg cgcgtctcca ggcgcacgac gtgcggttgc tgcatgcgca attcggcggc
     4381 gtcctcgatg gtgaccaccc gctcgccgtt gtcgatcatg cccgacaggg cgttcagcat
     4441 ggtcgtcttg cccgaaccgg tgccgcccga cacgatcagg ttcaaccggc agcgcgcggc
     4501 gatgcgcagc aacgtcgcca tggcgggcga gatgttgccc tgctgggcca tctgatcgaa
     4561 gccgatctgg cgtttgccga actttcggat cgacaccgag gcgccgtcga tggcgagcgg
     4621 cgggatgatg atgttgacgc ggctgccgtc gagcaggcgg gcatcgcaga tcgggctcga
     4681 ttcgtcgacc cgccggccga tccggctgac gatgcggttg cagatgttga gcaggtgggc
     4741 attgtcctcg aacgttatcg acgtgaggtc gagcttgccg aagcgctcga tatagatctg
     4801 cttgggcccg ttgatcatga tgtcggtgat gccgtcgtcc tcgagcagcg gctcgagcgg
     4861 ccccaggccc atcatgtcgt tgacgagctg atagacgagg tcgacttgct ccggccggtt
     4921 gagctgcagg cggtgctcga ccagcagttc gatgacgagg ccctcgagct ggcgcaccag
     4981 ctccttgcgc ggcaggctga ccgcggccgc gagatcgatg cggctcatca ccagcggctg
     5041 cacggtgcga cgcgcctgtt cgatcttgct gcgcgacagc ccgctcgccg acttgtcggc
     5101 ggcctccggc ttggcgagct cgaccggccg caccggggcc atgggcatca gcggcgcggc
     5161 tgttggcgca atcacggcgc tctcggcgat ctcggcgggc gctgcggctg cctcggccgc
     5221 ttcgtcggcc agcgccaccg gagcgctgaa attgctcgcc ggcagaaccg gtcgcaggac
     5281 ctcggcgacg tagccgcgca gctcgagtgg cgccagcagc acgccgctgt tgcggaaatg
     5341 gagttgggcg agcaggccgg cctggcggct cacctcgccg gccggcgcgc cggctttcat
     5401 catctcgcgc aggcgcggcg tgacggcctc gtgcagcgcg gctgccgccg cggcgatgcg
     5461 cgcggtcctg tcgacaggac ccaccgccgc gcccgggcgg ccttctgccg gcattcggcg
     5521 gccgattc
//
LOCUS       DASWGA010000045         1612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1015721, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000045 DASWGA010000000
VERSION     DASWGA010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1015721"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="VF991_00885"
     CDS             <1..263
                     /locus_tag="VF991_00885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA-associated domain-containing protein"
                     /protein_id="HEX9555015.1"
                     /translation="LDPDGRKKLFAQHLVAYVPLAAHIRRILDERSTHHAPASRFRDE
                     LEDHMSEQFAEQTLRAVTSWARYGEVFAYDEAAGVFSLDNPS"
     gene            complement(278..1210)
                     /locus_tag="VF991_00890"
     CDS             complement(278..1210)
                     /locus_tag="VF991_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEX9555016.1"
                     /translation="MATLLISHPSFLEHDTGPYHPERPDRLRAVLAALDDPAFTGLVR
                     VAAPAASMEELTRVHPQQYVEAILGIRPGAGEHVHVDGDTVMGQGSAEAARRAAGAVV
                     AGVEAVMEGKVQTAFAAVRPPGHHATPDIPGGFCLFNNIAIGARHAQAKYGVQRVAIL
                     DFDVHHGQGTQAVVEPDPTLFYASTHQYPLYPGTGFADETGIADNVVNVPLAPGAGGT
                     AFRAAWSERILPALEGFAPELVLVSAGFDAHAADPLAQLEVETEDFIWLTEQLLAIAA
                     RHAGGRLVSVLEGGYDLKVLAESAATHVQALMRA"
     gene            complement(1228..>1612)
                     /locus_tag="VF991_00895"
     CDS             complement(1228..>1612)
                     /locus_tag="VF991_00895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEX9555017.1"
                     /translation="VGAFARFSWNDGRTEIMSFTDITTSLSAGLSIKGESWGRPKDTI
                     GIGGAVNSISADLANYLANGGLGILIGDGALTYGSEVVAETYYSLHLAKGVYVTADYQ
                     FLANPAYNAVRGPVHVFSGRLMAKF"
BASE COUNT          270 a          519 c          566 g          257 t
ORIGIN      
        1 atctcgatcc cgacgggcgc aaaaaattgt ttgcccagca cctggtggcg tacgtgccgc
       61 tggccgccca cattcgtcgc atcctcgacg aacgcagcac ccatcacgcg ccggccagcc
      121 gcttccgcga cgagctggag gaccacatgt ccgaacagtt cgccgagcag accctgcgcg
      181 cggtgacctc gtgggcccgc tatggcgagg tcttcgccta cgacgaggca gccggcgtct
      241 tcagcctcga caatccgagc tgacggccgg cttccgttca agcccgcatc agggcttgca
      301 catgcgtggc ggcagactcg gcaagaacct tgaggtcgta gccgccttcc agcacggaga
      361 ccagccggcc cccggcatgg cgggctgcga tcgccaacag ttgctcggtc agccagatga
      421 aatcctcggt ctcgacctcg agctgggcca gcggatcggc ggcatgggca tcgaagcccg
      481 ccgacaccaa gacaagctcg ggcgcgaaac cctcgagggc gggaaggatg cgttcgctcc
      541 aggcggcgcg gaacgcggtg ccgccggcgc cgggcgcgag cggcacgttg acgacgttgt
      601 cggcaatgcc ggtttcgtct gcaaagccgg tgccgggata gagcggatac tggtgcgtcg
      661 aggcgtagaa cagggtgggg tcgggttcga cgacggcctg cgttccctgg ccatgatgga
      721 cgtcgaaatc gaggatggcg acgcgctgca cgccgtattt cgcctgggca tggcgcgcgc
      781 cgatggcgat gttgttgaac aggcagaagc cgccggggat gtcgggcgtg gcatggtggc
      841 cgggcggacg gaccgccgcg aaggcggttt gcaccttgcc ttccatcacc gcctcgacgc
      901 cggcgaccac ggcgcccgcg gcgcgccgcg cggcctcggc gctgccctgg cccatcacgg
      961 tgtcgccgtc gacatggaca tgctcgccgg ccccgggacg gatgccgagt atcgcctcga
     1021 catactgctg gggatgcacg cgcgtcagtt cttccatcga ggcggcgggg gcggcaacgc
     1081 ggaccaggcc ggtaaaggcc ggatcgtcga gcgccgccag cacggcgcgc agccggtcgg
     1141 gccgttcggg atgatacggt ccggtgtcgt gctcgaggaa cgacggatgg ctgatcagca
     1201 gcgtcgccat gccttctctc tacgcactca gaacttggcc atcaaccgtc cgctgaatac
     1261 gtggaccggg ccgcgcacgg cgttgtaggc gggattggcc aggaattggt aatcggcggt
     1321 gacgtagacg cccttggcca gatgcaggga ataataggtt tcagccacga cctccgagcc
     1381 gtaggtcagg gcgccgtcgc cgatcaggat gccgagccca ccgtttgcca ggtagttggc
     1441 gaggtcggct gagatcgagt tcaccgcgcc gccgatgccg atcgtgtcct tcggtcggcc
     1501 ccacgattcg cccttgatcg agaggccggc ggacaggctg gtggtgatgt cggtgaagga
     1561 catgatctcg gtgcgcccgt cgttccagct gaagcgggca aaggcgccga ca
//
LOCUS       DASWGA010000046         3130 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1777127, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000046 DASWGA010000000
VERSION     DASWGA010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3130
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1777127"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..1060)
                     /locus_tag="VF991_00900"
     CDS             complement(62..1060)
                     /locus_tag="VF991_00900"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9555018.1"
                     /translation="MSFARRLVGYASPRTLWSLALLLALLLVAPAMLGKYWLSVLILI
                     LYFAYVGQAWNILMGFAGQLSLGHALYAGLGGYIAAGLFFHYGIGPWAGVFAAVAAAA
                     LAGTIVGYLGFRFSLAGVYFALLTIAFSEFTRIGFDHWEWAGGSAGLFLKVDASSDIA
                     NLRGGPLLFYYVILALAAGAFILCRTLLESRLGRYWLAIREDAEAAQAVGVPVLRCKL
                     IAIVISAALTALGGVWNAFYYNNLFPETAFAMGRSIEITLAPIIGGLGTLFGPIVGAV
                     VLTGLGEAFTDLGEALGIPGIKQIFYGLALLVIVVYRPAGVWPWLADKLRLGERRR"
     gene            complement(1057..1938)
                     /locus_tag="VF991_00905"
     CDS             complement(1057..1938)
                     /locus_tag="VF991_00905"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9555019.1"
                     /translation="MTADFALSLAQAVTKGLLTGMVYGLRALGLSVIFGVMRVVNFAH
                     GEMMVVGMYLAWMGFEYLGLSPLLSLPVIAAIFFAAGYALQRGLISPFIGRPEHQQFL
                     LLLAVAILLVNAALAIAGPDSRGVQLDSQFDSYELGPLVFDAVRLHAALAAVAIAGLL
                     WLFFTRTRTGKSIRAAADNHMGALVVGLDVRRLYAFTFGVGAACVGAAGALMITIIPV
                     TPFLAGEYTLLAFVIVIVGGLGSMTGALMGGLLIGVSEAVAGLVVQPSLKSMFSFGLL
                     ILILLLRPQGLFGKSSS"
     gene            complement(2177..>3130)
                     /locus_tag="VF991_00910"
     CDS             complement(2177..>3130)
                     /locus_tag="VF991_00910"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555020.1"
                     /translation="AIDAGANMLVGAFDSGQTIAIAQVAEQRGVPLIVNIAAAPQITE
                     QGYKFVVRNFPTAPMLITGALALHKEIFKASGKTPKTAVLMSVNDTFGTSMINGIKAL
                     FPKLDMPYEIVDTISYDPAAKDLSVEVGKAKATKADMLMPVSRLNDAKLIVQEMVKQR
                     WEPMAVMNPGAPGLYEQDFLKTMGKYGDFMISNVPWLDPKSTMTQALDKRHAAKFAND
                     QLDINGGFTFEGMLVAAQAWLAAKSTKADALMDALRKTRIDQHVIIGGPIQFDAKGQN
                     VNIKAAAVENLKRKPTVVMPLESAAAPLVFPMPGWNDKRRT"
BASE COUNT          570 a         1004 c         1091 g          465 t
ORIGIN      
        1 tgcaccgcgc gcaggccgcg gaagctcttg ccgacgccgt cgaggtcgag ccgcgcgccg
       61 ctcatcgccg gcgctccccg agcctgagct tgtcggccag ccacggccat acgccggccg
      121 gccgatagac cacgatcacc agcagcgcca ggccgtagaa gatctgcttg atgcccggaa
      181 tgccgagcgc ttcgcccaga tcggtgaagg cctcgcccag tccggtcagc acgacggcgc
      241 cgacgatcgg tccgaacaat gtgcccagcc cgccgatgat cggggcgagc gtgatctcga
      301 tcgagcggcc catggcgaag gcggtctcgg gaaagaggtt gttgtagtag aaggcgttcc
      361 acacgccgcc cagcgcggtc agcgccgccg agatcacgat ggcgatcagc ttgcagcgca
      421 gcaccggcac gccgaccgcc tgggccgcct cggcgtcctc gcggatggcg agccagtaac
      481 ggccgagccg gctttccagc agggtgcggc agagaatgaa ggcgccggcc gccagcgcca
      541 ggatcacgta atagaagagc aggggaccgc cgcgcaggtt cgcgatatcg ctgctggcgt
      601 cgaccttgag gaacagcccg gccgagccgc cggcccattc ccagtggtcg aagccgatgc
      661 gggtgaattc gctgaaggcg atggtgagca gggcgaaata gacgccggcc agcgagaagc
      721 gaaagccgag atagccgacg atcgtgccgg ccagggcggc tgcggccacg gcggcaaaca
      781 cgccggccca cgggccgatg ccgtaatgga agaacaggcc ggccgcgatg tagccgccca
      841 gcccggcata gagcgcgtga ccgagcgaga gctggccggc gaagcccatc aggatgttcc
      901 aggcctgacc gacataggcg aaatagagga tcaggatcag gaccgagagc cagtatttgc
      961 cgagcatcgc gggcgccacc agcaagagcg cgagcaggag ggcgaggctc cacaaggtgc
     1021 gcggcgaggc gtaaccgacc agacgccgcg cgaagctcac gagctgctct tgccgaacag
     1081 accctgcggc cgcagcagca ggatcaggat cagcagcccg aagctgaaca tgcttttaag
     1141 tgacggctgc accaccaggc ccgccacggc ctcgctgacg ccgatcaaca ggccgcccat
     1201 cagcgcgccg gtcatgctgc cgagcccgcc cacgatcacg atcacgaagg cgagtagggt
     1261 gtattcgccg gcgaggaagg gcgtcaccgg gatgatggtg atcatgagcg cgcctgcggc
     1321 accgacgcag gccgcgccga cgccgaaggt gaaggcatag agccggcgca cgtcgaggcc
     1381 gaccaccagc gcgcccatgt ggttgtcggc ggcggcgcgg atcgacttgc cggtgcgcgt
     1441 gcgggtgaag aagagccaaa gcagaccggc gatggcgacg gcggcaaggg ctgcatgcag
     1501 gcgcacggcg tcgaacacca gggggcccag ctcgtaggaa tcgaactgcg agtccaactg
     1561 cacgccgcgc gagtcgggac cggcgatggc gagcgctgca ttgaccagca ggatggccac
     1621 cgccagcagc agcaggaact gctggtgctc cggtcggccg atgaagggcg agatcaggcc
     1681 gcgctgcagg gcgtagcccg cggcgaagaa gatcgcggcg atgacaggca ggctgagcag
     1741 cggcgagagc ccgagatact cgaagcccat ccaggcgaga tacatgccga cgaccatcat
     1801 ctcgccatgc gcgaagttga ccacgcgcat gaccccgaag atcaccgaca ggccgagcgc
     1861 cctcagcccg tagaccatcc cggtcaacag gcccttggtg acggcctggg ccagcgagag
     1921 ggcgaagtcg gcggtcatct atttattagt cgagcggtcg acgccgcgat cagacgccct
     1981 ctccgcccgc gcagcggggg gagagggagg ggacccgcgc gtcagcgcgg ggagggtgag
     2041 gtgggctacg gtgtagccaa cggaacatct cgtttttggg aagcaccacc tcaccctccc
     2101 attgcttcgc aatgggcccc tccctctccc ccgctacgcg gcggagaggg cgcttgagcg
     2161 cggggcgatc tgcggctcac gtccggcgct tgtcgttcca gcccggcatc gggaagacga
     2221 gcggtgcggc ggccgattca agcggcatca cgacggtcgg cttgcgtttc aggttctcga
     2281 ccgcggcggc cttgatgttg acgttctggc ccttggcgtc gaactggatc ggaccgccga
     2341 tgatcacgtg ctggtcgatc cgggtcttgc gcagcgcgtc catcagggcg tcggccttgg
     2401 tcgacttggc cgcgagccag gcttgggcgg cgaccagcat cccttcgaag gtgaagccgc
     2461 cgttgatgtc gagctggtcg ttggcgaact tcgcggcatg gcgcttgtcg agcgcctggg
     2521 tcatcgtcga tttggggtcg agccacggca cgttggagat catgaagtcg ccgtacttgc
     2581 ccatggtctt gaggaagtcc tgctcgtaga ggccgggcgc gccgggattc atcaccgcca
     2641 tcggctccca gcgctgcttc accatctcct gcacgatcag cttggcgtcg ttcaatcggc
     2701 tcaccggcat cagcatgtcg gccttggtcg ccttggcctt gccgacctcg accgagagat
     2761 ccttggccgc cggatcgtag ctgatcgtgt cgacgatctc gtagggcatg tcgagcttgg
     2821 gaaacagcgc cttgatgccg ttgatcatcg aggtgccgaa cgtgtcgttg acgctcatca
     2881 gcaccgcggt cttcggcgtc ttgcccgagg ccttgaagat ctccttgtgc agggcaagtg
     2941 cgccggtgat cagcatcggc gccgtcggga agttgcgcac cacgaacttg tagccttgtt
     3001 cggtgatctg cggcgccgcc gcgatgttga cgatcagcgg cacgccgcgc tgctcggcga
     3061 cctgggcgat ggcgatggtc tggccggagt cgaaggcgcc gaccagcatg ttcgcgccgg
     3121 cgtcgatcgc
//
LOCUS       DASWGA010000047         1622 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2154954, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000047 DASWGA010000000
VERSION     DASWGA010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2154954"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..821)
                     /locus_tag="VF991_00915"
     CDS             complement(<1..821)
                     /locus_tag="VF991_00915"
                     /inference="COORDINATES: protein motif:HMM:NF012872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEX9555021.1"
                     /translation="MNAVTPIPSLIPENAPFSSEQRAWLNGFFAAYLGVNAEAAADER
                     DEPADPDEDFPWHDAALAMAERLELAKERRPARQLMAAMAQLDCGQCGYLCQTYAEAV
                     WSGAEADIGRCVPGGKETQRKLKELMVALESQRGGPIAAPAVKVAGPLGSRDRPALAT
                     LVDAYPLNRAGSDKDVRHVVLDLSTTDMTYETGDSLGVFARKNPKLVQAVLDRLGASG
                     EEMVGHDGEALPLRQVLLSKVDIARPSDDCMLFLAERAFDGEEALQLQALARGEGP"
     gene            complement(818..>1622)
                     /locus_tag="VF991_00920"
     CDS             complement(818..>1622)
                     /locus_tag="VF991_00920"
                     /inference="COORDINATES: protein motif:HMM:NF013259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NirA family protein"
                     /protein_id="HEX9555022.1"
                     /translation="AFIAEVEKEYGQSLRRAAGADVAPRPAADKHGHIGVRQQKQAGQ
                     NYLGLVLPVGRLTSGQMRGLAEIAERFGSGTLRLTVWQNLLISDVADRDIGICIAAIN
                     ALGLGVEASAIRRGLVACTGNAGCKFSASNTKGHALRLADYLEARVAVDLPINIHLTG
                     CHHSCAQHYVGDIGLLACKVEQGELSVEGYHVYIGGGAASTAEQAMAREYAQSVVFDD
                     LPPLLERLLAAWLAHRATPAESFFEFCRRQEIAELRDLANRAPLRALAA"
BASE COUNT          249 a          547 c          571 g          255 t
ORIGIN      
        1 ggtccctcgc cgcgggccag cgcctgcaat tgcaaagcct cctcgccatc gaaggcgcgc
       61 tcggccagga acagcatgca gtcgtcgctc ggccgggcga tgtcgacctt gctcagcagg
      121 acctgccgca gaggcagcgc ctcgccatca tgaccgacca tttcctcgcc gctggcgccc
      181 agccggtcga gcacagcctg caccagcttg gggttcttgc gggcgaacac accgagactg
      241 tcgcccgtct cgtaagtcat gtcggtggtc gacagatcga gcacgacatg gcgcacgtcc
      301 ttgtccgacc cggcgcggtt cagcggatag gcatcgacca gggtcgcgag cgcgggccgg
      361 tcgcgcgagc caagcgggcc ggcgaccttg acggccggcg cggctatggg tccgccgcgt
      421 tgcgactcca gggcgaccat cagttctttc agcttgcgct gggtttcctt gccgcccggc
      481 acgcagcggc cgatgtcggc ctcggcgccg gaccatacgg cctcggcgta ggtctggcag
      541 agatagccgc actggccgca gtcgagctgg gccatcgccg ccatcaactg gcgcgcgggc
      601 ctgcgctcct tggcgagctc caggcgctcg gccatggcga gcgcggcatc gtgccaggga
      661 aaatcctcgt cgggatcggc gggttcgtcc ctctcgtcag cggcggcctc ggcgttgaca
      721 ccgagatagg cggcaaagaa gccgttcagc caggcgcgct gttccgagga gaacggcgcg
      781 ttctccggga tcagcgacgg gatgggcgtc accgcgttca tgccgcgagc gcgcgtagcg
      841 gcgcccggtt ggcgagatcg cgcagctcgg cgatctcctg tcggcggcag aattcgaaga
      901 acgattcggc cggcgtcgcg cgatgggcga gccaggccgc gagcagccgt tcgagcaggg
      961 gcggcaggtc atcgaacacc accgattggg cgtattcgcg ggccatcgcc tgctcggcgg
     1021 tagaggcggc accgccaccg atatagacgt gatagccctc gacgcttagc tcgccttgct
     1081 cgaccttgca ggcgagcagc ccgatgtcgc cgacatagtg ctgggcgcag gagtgatggc
     1141 agccggtgag gtggatgttg atgggcaggt caaccgccac gcgggcctcg agatagtcgg
     1201 cgagccgcag cgcgtggccc ttggtgttcg aggccgagaa cttgcagccg gcattgccgg
     1261 tacaggccac cagcccgcgg cggatcgcgc tcgcctcaac gcccaggccg agagcgttga
     1321 tggcggcgat gcagatgccg atgtcgcggt cggcgacgtc ggagatcaag aggttctgcc
     1381 ataccgtgag cctgagcgtg ccgctgccga agcgctcggc aatctcggcc aggccgcgca
     1441 tctgtccgga ggtcaaccgc ccgaccggca gcaccaggcc gagatagttt tgccccgcct
     1501 gcttctgctg acgcacgccg atatggccat gcttgtcggc ggccgggcgc ggcgccacgt
     1561 cggcccccgc ggcgcggcgc agcgactggc cgtactcctt ttcgacttcg gcgatgaagg
     1621 cc
//
LOCUS       DASWGA010000048        16862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_890994, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000048 DASWGA010000000
VERSION     DASWGA010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 16862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16862
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890994"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..1233)
                     /locus_tag="VF991_00925"
     CDS             complement(214..1233)
                     /locus_tag="VF991_00925"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEX9555023.1"
                     /translation="MAARRALITGITGMVGSHLAEFLLERTDWDVIGMCRWRSPLDNL
                     ANIAWRINAGDRVSLLYGDLRDTMSIQNVVANAKPDYVFHLAAQSFPRSSFDAPLDTM
                     DTNVQGTVRVLDALKQHAPKAIIHVCASSEVFGRVPKEKLPIDEECTFHPASPYAISK
                     VGTDLVGRFYAEAYGMTVMTTRMFTHTGPRRGDVFAESTFAKQIAMIEHNRIPPVVKV
                     GNLQSLRTVADVRDAVRAYYMLVTVNPTPGAYYNIGGSHSCTVKDILDTLISFSPCKA
                     DIKVEVDRDRLRPIDADLQVPNTAKFHAHTGWKPEIPYETTLRDLLDYWRGRVATEGD
                     RFLTR"
     gene            1459..2388
                     /locus_tag="VF991_00930"
     CDS             1459..2388
                     /locus_tag="VF991_00930"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEX9555024.1"
                     /translation="MARRSEEYIVKHYPENLMRTPMHMSMGQEFVPVGVCAALEGKAD
                     VFASYRSHAAFLAQTHDTDRFFSELYGRTSGTGEGKGGSMHLAAPDEGHILSSGVVAT
                     QIPVAVGAAFANRQLRTGRTAVVFFGDGAADAGVFWESINAAALFRLPVIFVCEDNGY
                     AVDTPREARQMASSISEAVKPFGADTYEDDSGDVESVYSLAKHATEKAHRERRPAFLN
                     IKCCRYLEHVGIGTDWNWGYRDQAAVERDWISRDALKMQRARLASHQVSESAIAAIEE
                     EIDKAIATSVRRAAEAPIPAPDRLHAGVFYEKA"
     gene            2375..3415
                     /locus_tag="VF991_00935"
     CDS             2375..3415
                     /locus_tag="VF991_00935"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9555025.1"
                     /translation="MRKLDYSGAIREAMTQEMERDPRVFVYGIGVPTWSKIFNTTRGL
                     AEKFGSERCFDTPISEDAMTGFGLGAAIRGLRPIHVHIRVDFMILATNQLLNMVSNYT
                     YSTGGKLKVPLVVRAVIGRGWGQGAQHSKSLFSNFTHIPGLKVIAPTTPSDMKGMLTA
                     AIRDDNPVICFEHRWLYWAEEDVPEAPYEIPLGVGRILRPGRDVTVVGLSWMNVEARL
                     AADILQKRGVSLEIIDPRTLAPLDEDLIVQSVKRTGRCIIADCDWVDSGFSAELSARI
                     NEKCFGMLKAPVKRIGFAHTPCPTVRELENEFYPNAKTIVHAVEDMLGLEAANLEGED
                     FFSHERRFRGPF"
     gene            3416..4201
                     /locus_tag="VF991_00940"
     CDS             3416..4201
                     /locus_tag="VF991_00940"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555026.1"
                     /translation="MDLGLSGKFALVTGGSHGIGLASARQLAAEGCNVAICSRSQQRL
                     DAAMESLKGYGVRLLAVTADVLEATDADRVMDVLDREWGELHILVNNVGGGGRWGKES
                     VEETELKVWSEVYEKNAMAAVRFTRRALPHMRRSRWGRVVTITSIYGGKEGGGRPWFT
                     MAKAAETGLMKSLSAMTYLVREGITFNSVAPGGIYIPGTGFEDEKRRDPAAFARMVDA
                     EYPLGRLGTPEEVAAVVVFLCSAQASLVNGANITVDGGQSRSF"
     gene            4298..5224
                     /locus_tag="VF991_00945"
     CDS             4298..5224
                     /locus_tag="VF991_00945"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEX9555027.1"
                     /translation="MKDEAIYRRLFRAALLIRLVEERIIALYPSDKIQSPVHLSIGQE
                     AVAVGVCDALRPNDLVFATYRSHGFYIAKGGRLDAMFAELYGHKGGVSGGKAGSMHLA
                     APEVGLMGSSAVVASTIPHAVGAALSFKRRGSARLAVAAFGDGATEEGVYHESLNFAA
                     LMKVPVLFLCEDNGLAVHSHRPARQTYRLLEHARSYGIAGRRLEEGWDMLAVRQATLE
                     AAARVRAGEPYLLEIVTSRYKEHVGVGEDFHFNYRTKDSVDAWKGRDPLVVDIKLVEA
                     LRPELEREIAAAVAFAEASPAPGRAELLTDVI"
     gene            5224..6312
                     /locus_tag="VF991_00950"
     CDS             5224..6312
                     /locus_tag="VF991_00950"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9555028.1"
                     /translation="MSIASAKPRPQRARVLSYAGALLETMDAALANHSNVFIMGQGVD
                     DFKGIFGSTTGLAEKYGAARVFDVPLMEEGMTGVAIGAALVGDYPITTHIRADFSFLA
                     MNQIINLAAKYRYMFGGLMRCPMLIRIVVGRSWGQGAQHSQSPQATFAHYPGLTVVMP
                     SSSQAILDMYPAIINRHPGPVISIEHRLLYNLDFTVAPSDKRVPLTSYVAHKGSDVTV
                     VATSVMVLEAMRAAQYVQDKAGVSAEIIDLNSISHPDWDLVANSVRKTGRLVIADTSW
                     LEYGVAAEVCRQLVVRDPRLLRQAPSMLGMAPAPCPTAKSLEDIYYPSQHETVDAILT
                     QVKGQGHGIELPVERSMTEGYKRFRGPF"
     gene            complement(6313..7281)
                     /locus_tag="VF991_00955"
     CDS             complement(6313..7281)
                     /locus_tag="VF991_00955"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX9555029.1"
                     /translation="MDFAGKKVLVAGGSGFIGTNLALALANRDARLRLTVHQKPLQAP
                     IADAEVAVLDLRRPEHCAQAVEGMDYVFLCAAHTSGAAVIRTTPLVHITPNVLINTLM
                     LEAAHRAKVAKFCFISSGAAYPPTGDRPVREAEMFDGEPHDVYFAAGWMKRYAEILCR
                     TYAEKVLQPMPTVVVRPSNVYGPYDKFDFAVSHVTAALIRRVVERQSPLEVWGTGEDV
                     RDLIYVDDFIEGMLAAFATDQRHLAINICSGTGHSVRQILQKILTADRYDNADVRYDP
                     SRPSTIPVRLMDNSAARKQLGFTANTSLEEGLGRTIQWYRAATKAA"
     gene            7394..9442
                     /locus_tag="VF991_00960"
     CDS             7394..9442
                     /locus_tag="VF991_00960"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HEX9555030.1"
                     /translation="MSTANRPDPKIAIGGESPAASLRVPVVVGLVQINNSFSGQNYLP
                     YSVALLQTYVQKMAGEPGRYAFLPPLYKRVRIADAVEALKDADLVGFSTYVWNGRISL
                     EIARRLKAAKPGIVIVFGGPHVPDQPEAFLRANPQIDLAVHNEGERTFLKLLEMFPDR
                     SAWQSLPGVSFAKPDGGFVRNPNTERVRDLDEIPSPFLEGAFDSIMAANPQESWIGLW
                     ETNRGCPFRCTFCDWGSATAAKVTKFGEQRLYREVDWFAEKKIEYIFCCDANFGIQKR
                     DVDIAKYVAGIKQVTGYPVALSVQNTKNATERAYETQKILSDAGLNKGVALSMQSVDM
                     TTLEAIKRDNISLDTYMELQRRFTRDRVETYSDLILGLPGETYESFVRGVDQLMENGQ
                     HNRIQFNNLSILPNAEMGDPAYQAKYGMVMVESKIINIHGERVELDDDVPEIQDLVVA
                     TAAMPHADWRRTRVFCWMTALLHFDKLFQIPLILAHGISSISYRDMIEAFMAVEPERF
                     PLIAEINAFFHSEAQSIQKGGAEYVFSKEYLGIYWPADEFIFVKLTAEGKVDAFYAEA
                     GELLREIVSARSAGLPTGIIDEAVRLNHALVHQPFAKGDLKVRLGHDLLDYWRKVRDG
                     EQALLSEAPLVVEIDRTSKPYDDFQKWCREIVWWGNKKGAYLYSPRAAAITPELAGHY
                     "
     gene            9446..10420
                     /locus_tag="VF991_00965"
     CDS             9446..10420
                     /locus_tag="VF991_00965"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9555031.1"
                     /translation="MRYRPLGRTGLVVSEIGFGAWGIGGRTANQTSYGDTDDRTSLAA
                     LARALEQGITFFDTSAAYGDGHSEELIGRAVRGVRSRVVITTKAGYESWDQPPDFSPQ
                     AIVASTERSLLRLGTDYLDLLQLHNPPFDVLTAPDVREALARLVTSGKIRAWGISSKG
                     PQEALEALRACDVAVIQANFNMMDVRALTSGLLAEVARVGAGFIARTPLCFGFLSGTI
                     RRDTEFAPGDHRARWPRAQLANWIDGAADLLAAISASPGEAGVQAALRFCLAFPAVSS
                     AIPGIMTPAEADQNAAASGFGPLGQQAVDAILEINRNRQFFVADAQAS"
     gene            complement(10374..11636)
                     /locus_tag="VF991_00970"
     CDS             complement(10374..11636)
                     /locus_tag="VF991_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HEX9555032.1"
                     /translation="MPGRMGDGRQHGDGMNVEQGVFLVGGLGSRLRTLTGETAKPVLD
                     VGGRPFLDHLLDEASRHGLKRALLLCGYRADDLVTAYRGRTIRGMTIDTVVEAAPAGT
                     AGALALAADRLDDWFFLVNGDSLFDFNWLGLCPGPVDGGSSWVRMALASGIVGERYGL
                     VAVDGQRVRDFIPSGPLDRPINAGVYLMRKAVLSRIGSLPCSLERDVLPALAKDGLVE
                     GCVVEAPFIDIGTPEDFDRAQRLVPLILKRPAAFLDRDGVLNEDTGYVHRADQVRWVD
                     GALKTVRWLNDAGYLVFVVTNQAGIARGLYSEEHVDSLHGWMSAELRRHGAHIDGIEY
                     CPYHPEGTVERYKRVSDLRKPAPGMIRKLLSEWSVDASRSFLVGDRETDIEAAAAAGI
                     RGHLFAGGNLFDFVTKLARPRRRIADFD"
     gene            complement(11591..12787)
                     /locus_tag="VF991_00975"
     CDS             complement(11591..12787)
                     /locus_tag="VF991_00975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555033.1"
                     /translation="MQKAAIKHCTSRASRYPYDGMPNPVYRLGSYNHPRQLNVNARPY
                     VTFVSYFRNDSYTSDFDLRVRRATSFLVRQLQRAAVEAELILVEWNPPSGRPLIIESL
                     DPLPQGGCVQVRGVIVGQEHHRKFVGSQEWGMNPAAAANVGLRRAQGRFVSPKAADTY
                     LSDEIIATIARRDLHENALYRCDRCDVTLSARDLEELPDDLLLARLESLDSTRYSLIP
                     HPPQWYIRELHTNACGDFLLMSRKMWDTVRGFPLDNTVLSLDCDSLIMHAAVALGSHE
                     ICLPPACRIFKGRHARLFSNRITYVWSPFQSMVDRIMTNFRWWRLQTITRSVFDYPKR
                     KVTGVEGVLGPSIERNFVKPAEQWAHGIVPELGQPENWGLGDQPLEERLLCRAGWATA
                     GSTATA"
     gene            12805..14388
                     /locus_tag="VF991_00980"
     CDS             12805..14388
                     /locus_tag="VF991_00980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555034.1"
                     /translation="MSGQVVRPDLRSRLWRRARDFVARRLLREANRIWSDEPHEIDRA
                     IEKVEQAWSLTRDPEIAVQLSTMYDQANQNPQALVVLREAFRRNPRHALVRHHAAITL
                     LRHGTAADVRDFFDSVLKVDRNDAFAQFVVSLLDGYDGWVDELVSSIRGQQDGRQPFV
                     ISCPVWGQPFADDFVRYSCAALLSPNNLPKLAERCSIHIVIFTTAATESHLRADPLFA
                     RLSEYATVGFVRYSDAQVNYRQAMEAHYGHEIVPHSDHSLAYYYERNCKFALMSCAHY
                     VALAAGRTTDALVSCQVADTLLNDGALTFMVDRMAGGAAAVLVNCIQMDGAVLRSVLD
                     DKFRHGDGVIQIPSESCVKILSEHLPPYNLARAGNLPQIPLRVCWRVGAHGILVHGNH
                     YHPFCLRPKEFTHPLQLTVDPIDSRFIDRSSLDMDQIHLVQDESVVGLSMEDGPLPEQ
                     FARRAEPLSIAEAAFWLWGYWGRLRGVFYRTPLRLGRGIPREEWAQAEKKAAAVVDAI
                     VEQASRFEERRRARGSWRL"
     gene            14707..15792
                     /locus_tag="VF991_00985"
     CDS             14707..15792
                     /locus_tag="VF991_00985"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9555035.1"
                     /translation="MQIVDAIPADLIYGEADTYTTGFQRPRHLEDLITTAVARQDPAR
                     AIDIGCNDGALLEALRRAGYRQVVGVEPNPVAAAAARAKGHEVHTSYLTPELATRLVT
                     ESGAFDTVYARHVVEHVSDLASFFDAIRILLRPDGFLVAELPDVEEGLALGSPAILWE
                     EHVSYFTRALAEYMLERFGFRISDRRRYVFGGGSLAFVAQKKAVPAHCTVARPDPSAT
                     IATLHRFVAGMFKQKSEMRNLVSLARSNGYRILVYGAAPRSCLLVSVCQIAGMIDLVV
                     DDRQDIHGRLMPGTQCVVHPLKEVASEAGGKILCLLGVGSENEFKVRAKLEAAVEARL
                     AFVSLFPPRNTLESIAEARRIIGADQK"
     gene            15807..>16862
                     /locus_tag="VF991_00990"
     CDS             15807..>16862
                     /locus_tag="VF991_00990"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX9555036.1"
                     /translation="MSRIDLPLQPNGYKVQWSYLPKQFSAENIEEILDLFRKFVPTGD
                     FTLGKPVREFEHKFAAMIGTRHAIGVNSGTDALKLSLKAAGVGPGDEVITTANTFIAT
                     VGAIAETYARPVFVDCTDNFCMDVSQVEARITKRTKALLPVHLAGQMTDMPALMEVAN
                     KHGLPVIEDSCQCILGNIEGRKAGTFGHAGGFSLHPLKNLNVWADGGMIVTDDDEFAT
                     LLRQLRNHGLKDRDSVVRMGCNSRLDSLQAVVGNWLIGQVDFITDTRIRNAAYLDRGL
                     GRIPQISLPRRFNNRKLVFHLYIVFAQRRDELLAHCKKRGIEAKVHYPVPLYLQEGLR
                     PYGYKKGDFPVTDRQADT"
BASE COUNT         3035 a         5379 c         5485 g         2963 t
ORIGIN      
        1 atgccgaaga aaggcggcag gaagccggtc cctatatagc aatgcttgtc gatggccatc
       61 gacagcacgg cgccgccatg cctgcggtac caggccgggt agtctgtgcc gccgccaaag
      121 aacgaaacgc gatagggcgt ccgggaaatc gccatcagca tgtaaaagcc atcaaccttt
      181 ctgactgccg cctgactgcc ggatctgccg ccgtcagcgg gtcagaaaac ggtcgccttc
      241 cgttgccacg cgaccccgcc agtagtccag cagatcgcgc agggtcgtct cgtaggggat
      301 ttcgggcttc cagcccgtat gggcgtggaa tttggcggta ttcgggacct gcagatcggc
      361 gtcgatcggg cgcaggcgat cgcggtcgac ttcgaccttg atgtcggcct tgcagggcga
      421 gaaggagatc agtgtgtcga ggatgtcctt gaccgtgcag gaatggctgc cgccgatatt
      481 gtagtaggca cccggcgtcg ggttgacggt caccagcatg tagtaggcgc gcacggcgtc
      541 gcgcacgtcg gcgacggtgc gcagggattg caggttgccg accttgacca cgggcgggat
      601 gcgattgtgc tcgatcatcg cgatttgctt ggcgaaggtc gactcggcga agacgtcgcc
      661 gcgccgcgga ccggtgtggg tgaacatccg cgtcgtcatg accgtcatgc cgtaggcctc
      721 ggcatagaaa cgcccgacga gatcggtgcc gaccttggag atggcgtagg gcgacgccgg
      781 gtggaaggtg cattcctcgt cgatcggcag cttctccttc ggcacgcgcc cgaacacctc
      841 ggacgaggcg cagacatgga tgatcgcctt gggggcatgc tgcttcagcg catcgaggac
      901 gcgcaccgtt ccctggacgt tggtgtccat ggtgtcgagc ggggcatcga agctggagcg
      961 tggaaagctc tgcgcggcga ggtggaagac gtagtccggc ttggcgttgg ccacgacgtt
     1021 ctggatcgac atcgtgtcgc gcaggtcgcc gtacagcagc gagacacgat cgccggcatt
     1081 gatccgccaa gcgatgttgg cgagattgtc gagcgggctg cgccatcggc acatcccgat
     1141 cacgtcccaa tccgtccgct cgagcaggaa ctcggccaag tgggaaccga ccattcccgt
     1201 gatgcccgta atgagggcgc gtcgagcagc catcgttcgc ctgttctacc tccgctgtcg
     1261 cggtctactt agttgaggcg aaagcaaaag gccaccccgg ctgtccggcc gcaagaagcg
     1321 gccgagacct cgccgttgcc ttgcgagtcg gaggtctcta tggtccgacc catcccaaaa
     1381 caacgatcag tcacgatgcc tcttgcccgc gatcccctgc ccaaaacgac gtcgatacag
     1441 ttgttcaaga gccttttcat ggctcggcgt tcggaagagt acatcgtcaa gcactatccc
     1501 gaaaacctca tgcgcacccc catgcatatg tcgatgggcc aggaattcgt gccggtcggc
     1561 gtttgcgcgg cgctggaagg caaggccgac gttttcgcct cgtaccgcag ccacgccgcg
     1621 ttcctggcgc aaacgcacga caccgaccgg ttcttctcgg agctgtatgg ccgcacctcc
     1681 gggacgggcg aaggcaaggg cggctcgatg cacctcgcgg cccccgacga gggccacatt
     1741 ctgtcgagcg gcgtggtcgc cacccagatt cccgtcgcgg tcggcgcggc cttcgccaac
     1801 cggcagctcc gtaccggtcg caccgcggtg gtattcttcg gcgacggcgc ggccgatgcc
     1861 ggcgtgttct gggagagcat caacgccgcc gccttgttcc ggctgccggt gatattcgtc
     1921 tgcgaggaca acggctacgc ggtcgacacg ccgcgcgagg cgcggcagat ggcgagctcg
     1981 atctccgaag ccgtcaagcc gttcggcgcc gacacatacg aggacgacag cggcgacgtc
     2041 gagagcgtct attcgctggc gaagcacgcg accgagaagg cccatcgcga gcgccgcccg
     2101 gcattcctca acatcaagtg ctgccgctac ctcgaacatg tcggcatcgg taccgactgg
     2161 aactggggct atcgcgatca ggcggccgtc gagcgcgact ggatcagccg cgatgccctc
     2221 aagatgcaac gcgccaggct ggcaagccac caagtcagcg aaagcgcgat cgccgcgatc
     2281 gaagaggaaa tcgacaaggc catcgccacg agcgtcaggc gggctgcgga agcgccgatc
     2341 ccagcgccgg accggctcca tgcaggtgtg ttttatgaga aagcttgatt acagcggtgc
     2401 catccgcgag gcgatgacgc aggagatgga gcgcgacccg cgggtcttcg tctacggcat
     2461 tggcgttccc acctggtcca agatcttcaa caccacgcgc ggcctggccg agaaattcgg
     2521 cagcgagcgc tgcttcgaca cgccgatctc ggaggacgcg atgaccggct tcggcctcgg
     2581 cgccgccatc cgcggtctgc ggccgatcca tgtccatatc cgcgtcgact tcatgattct
     2641 ggcgaccaac cagctcctca acatggtgtc gaactacacc tattcgacgg gcggcaagct
     2701 caaggtgccg ctggtggtgc gcgccgtaat cggccgcggc tgggggcagg gggcccagca
     2761 ctccaagagc ctgttctcga actttaccca cattcccggc ctcaaggtca tcgccccgac
     2821 cacgccgtcc gacatgaagg gcatgctgac cgcggcgatc cgcgacgaca atccggtgat
     2881 ctgtttcgag caccgctggc tctattgggc cgaggaagac gtgcccgagg cgccgtacga
     2941 gatcccgctc ggcgtcggcc gcatcctgcg gcctggccgc gatgtcaccg ttgtcggcct
     3001 gtcatggatg aacgtcgagg cgcggctcgc ggcggacatc ctgcaaaagc gcggcgtctc
     3061 gctcgagatc atcgatccgc gcacgctggc gccgctcgat gaggatttga tcgtccaatc
     3121 ggtgaagcgg accggccgct gcatcattgc cgactgcgac tgggtcgaca gcggtttcag
     3181 cgccgagctg tcggcgcgta tcaacgaaaa atgtttcggc atgctcaagg cgccggtcaa
     3241 gcgcatcggc tttgcccata cgccgtgccc gacggtgcgc gagctcgaga acgagttcta
     3301 tcccaacgcc aagaccatcg tgcacgcggt cgaggacatg ctcggactgg aagcggccaa
     3361 tctcgagggc gaggatttct tcagccacga acggcgcttc aggggtccgt tctagatgga
     3421 cttgggcctt tccggaaagt tcgccctggt gaccggcggc agtcacggca tcgggttggc
     3481 atcggcccgg cagcttgctg cggaaggctg caatgtcgcc atctgctcgc gctcgcagca
     3541 gcgtctcgat gcggccatgg agtcgctgaa gggctacggc gtgcgccttc tcgccgtgac
     3601 cgccgatgtc ctggaggcga ccgacgccga tcgggtgatg gatgtcctgg atcgcgaatg
     3661 gggcgaactg catatcctgg tcaacaatgt cggcggcggc ggacggtggg gcaaggagag
     3721 cgtggaagag accgagctca aggtgtggag cgaggtctat gaaaagaatg cgatggcggc
     3781 cgtgcgcttc acccggcgcg cgctgccgca tatgcgccgc agccggtggg ggcgggtggt
     3841 gaccatcacc tcgatctatg gcggcaagga aggcggcggc cggccgtggt tcaccatggc
     3901 caaggcggcc gagacaggct tgatgaagtc gctctccgcc atgacctacc tggtgcgcga
     3961 aggcatcacc ttcaattccg tggcgccggg cggcatctac atccccggca ccggcttcga
     4021 ggacgaaaag cggcgcgacc cggcggcgtt cgcgcgcatg gtcgacgcgg aatacccgct
     4081 gggccggctc ggaacgccgg aggaagtggc ggccgtggtg gtcttcctgt gctcggccca
     4141 ggcaagcctg gtgaacggcg ccaacatcac ggtcgatggc ggccagagcc gcagtttctg
     4201 agcggcacga tgggcaattg ccagatcgcg ccggctccgt tagcagtcgc cagccgtagc
     4261 cgcataccga gggccaaccg ccggggagcg tctgtctgtg aaggatgaag cgatctatcg
     4321 ccggctgttc cgggcggcgc tgctgatcag actggtcgag gaacggatca tcgcgctcta
     4381 tccgtccgac aagatccaaa gcccggtcca tctgtcgatc ggccaggaag ccgttgcggt
     4441 cggggtttgc gacgccctgc ggcccaacga cctggtcttc gcgacctatc gctcgcacgg
     4501 cttttacatt gccaagggcg ggcggctcga cgccatgttc gccgagctgt acggccacaa
     4561 gggcggcgtc tcgggcggca aggccgggtc gatgcacctt gccgcgcccg aggtcggcct
     4621 catgggatcc tcggccgttg tggccagcac catcccgcac gccgttggcg ccgcgctcag
     4681 cttcaagcgg cgcggcagcg cgcgtcttgc cgtggcggca ttcggcgacg gcgcgaccga
     4741 ggagggcgtc tatcacgaga gtctgaactt cgcggcgctg atgaaggtgc cggtgctgtt
     4801 cctgtgcgag gacaacgggc ttgccgtgca cagccatcgt ccggcgcgcc agacctatcg
     4861 cctgctcgag cacgcccggt cctacggcat cgccggccga cggctcgagg agggctggga
     4921 tatgctggcg gtccggcaag cgacgctcga agcggcggcg cgggtgcggg ccggcgagcc
     4981 gtacctgcta gagatcgtca cctcgcgcta taaggagcat gtcggcgtcg gcgaggattt
     5041 tcatttcaac tatcgcacga aggacagcgt cgatgcctgg aaggggcgcg acccgctggt
     5101 cgtcgacatc aagctggtcg aggcgctgcg accggaactc gagcgcgaga tcgccgcggc
     5161 cgtcgctttc gccgaagcca gtcccgcgcc ggggcgcgcc gagctgctga cggatgtgat
     5221 ctgatgagta tcgccagcgc caagccacgg ccgcagaggg cgcgcgtgct gtcctacgcg
     5281 ggcgcgctgc tcgagaccat ggacgccgcc ctggcgaacc attctaacgt tttcatcatg
     5341 ggccagggtg tcgacgactt taagggcatc ttcggctcga cgaccgggct tgccgagaaa
     5401 tacggcgccg cgcgggtgtt cgacgtgccg ctgatggaag aaggcatgac cggcgtggcc
     5461 atcggcgcgg cgctggtcgg cgactacccg atcacgacgc acatccgcgc cgatttctcc
     5521 tttctcgcga tgaaccagat catcaatctc gccgccaagt atcgctacat gttcggcgga
     5581 ctgatgcgct gcccgatgct gatccgcatc gtcgtcggcc gcagttgggg ccagggcgcg
     5641 cagcattcgc agagcccgca ggcgacgttc gcgcactatc cgggcttgac cgtggtcatg
     5701 ccgtcgagca gccaggcgat cctcgacatg tatcccgcga tcatcaatcg ccaccccggc
     5761 ccggtgatca gcatcgagca ccgtctgctc tacaatctcg atttcaccgt ggcgccgtcc
     5821 gacaagcgcg tgccgctcac cagctacgtc gcgcacaagg gcagcgacgt caccgtcgtc
     5881 gccacgtcgg tcatggtgct ggaagccatg cgtgccgccc agtatgtcca ggacaaggcc
     5941 ggggtttcgg cggagatcat cgatctcaat tcgatcagcc atccggattg ggatcttgtc
     6001 gccaacagcg tgcgcaagac cggacgcctg gtgatcgccg acacgtcgtg gctggaatac
     6061 ggcgtcgccg ccgaggtctg ccggcaactg gtggttcgcg atccacgcct gctgcgtcag
     6121 gcgccctcga tgctgggcat ggcgccggcg ccctgtccga ccgcaaaaag cctggaagac
     6181 atctactatc ccagccagca cgagacggtg gacgccatcc tgacccaggt gaagggccag
     6241 gggcacggca tcgaactgcc ggtcgaacgg tcgatgaccg agggttacaa gcggttccgc
     6301 ggaccgttct gatcaggcgg ccttggtcgc cgcccggtac cactgaatgg tgcggcccag
     6361 gccctcctcg agcgaggtgt tcgcggtgaa gccaagctgc ttgcgggcgg cgctgttgtc
     6421 catcagccgc accgggatgg tgctgggtcg cgaaggatcg tagcggacgt cggcgttgtc
     6481 atagcggtcg gcggtgagga tcttctgcag gatctggcgc acggagtggc cggtaccgct
     6541 gcagatgtta atcgccagat gccgctggtc tgtcgcgaag gcggcaagca tgccctcgat
     6601 gaagtcgtcg acataaatca ggtcacgcac gtcctcgccg gtgccccaga cctcgagcgg
     6661 gctctggcgt tcgaccacgc ggcggatcaa ggccgccgtc acatggctga cggcgaagtc
     6721 gaacttgtcg taggggccgt agacgttgga gggtcgcacc accacggtgg gcatcggctg
     6781 gagaactttt tccgcgtagg tgcggcagag gatttcggcg tagcgcttca tccagccagc
     6841 ggcaaaataa acgtcgtgcg gctcaccgtc gaacatctcg gcctcgcgga ccggccgatc
     6901 gccggtcggc ggataggcgg caccgctcga gatgaagcag aatttagcga ccttggcgcg
     6961 gtgcgcggcc tcgagcatca gggtgttgat cagcacgttg ggcgtgatgt gcaccagagg
     7021 cgtggtccga atgacggcgg cgcccgaggt gtgcgccgcg cacaggaaga cgtaatccat
     7081 gccctcgacc gcctgggcac agtgctccgg ccggcgcagg tccaggacgg cgacctcggc
     7141 gtccgcgatc ggcgcctgca acggcttttg atggacggtt agccgcaggc gagcgtcccg
     7201 gttggccaaa gcgagagcga gattggtccc tatgaacccg ctgccgccgg cgactaaaac
     7261 tttcttgccc gcaaaatcca ttccgtgtcc gatcctgatt gtcgagacag accacaattc
     7321 cgccttctat ctcaagggat tgggtgcggt aattgtattg cgttggaggg caaggcagct
     7381 tacctctacg cccatgtcga ccgccaatcg acccgacccc aagattgcca tcggcgggga
     7441 aagcccggct gcgtcgctgc gcgtgcccgt cgtggtcggt ctggtgcaga tcaacaactc
     7501 cttctccggc cagaactatc tgccctactc ggtcgccctg ctgcagacct atgtgcagaa
     7561 gatggcgggc gaacccggcc gatatgcgtt cctgccgccg ctctacaagc gcgtgcgcat
     7621 cgccgacgca gtcgaggcgt tgaaggacgc cgacctggtc ggcttcagca cctacgtgtg
     7681 gaacggccgc atctcgctcg aaatcgcccg acggctgaag gcggccaagc ccggcatcgt
     7741 catcgtcttc ggcggcccgc acgtgcccga ccagccggag gccttcctgc gggcaaatcc
     7801 ccagatcgac ctcgccgttc acaacgaggg cgagcgcacg ttcctgaagc ttctggagat
     7861 gtttccggat cgcagcgcct ggcagtcgct gcccggcgtc agcttcgcca agccggacgg
     7921 cggtttcgtg cgcaatccca ataccgagcg ggtgcgcgat ctcgacgaga ttccctcgcc
     7981 gttcctcgaa ggcgccttcg attcgatcat ggccgccaac ccgcaggaga gctggatcgg
     8041 tctgtgggag accaaccgcg gctgcccgtt ccgctgcacc ttctgcgact ggggatcggc
     8101 gacggcggcc aaggtcacga aattcggcga gcaacgcctc taccgcgaag tcgactggtt
     8161 cgccgagaag aagatcgaat acatcttctg ctgcgacgcc aacttcggca tccagaagcg
     8221 cgacgtcgac atcgccaagt atgtcgccgg gatcaagcag gttaccggct atccggtggc
     8281 gctgtcggtg cagaacacca agaacgccac cgagcgcgcc tacgagacgc aaaagatcct
     8341 gtcggacgca ggcctgaaca agggcgtggc gctctccatg cagagcgtcg acatgaccac
     8401 gctcgaggcg atcaagcgcg ataacatctc gctcgacacc tacatggagc tgcagcgccg
     8461 cttcacgcgc gacagggtgg agacctattc ggacctgatc ctcggcctgc ccggcgagac
     8521 ctatgaatcg ttcgtgcgtg gcgtcgacca gctcatggag aacggccagc acaaccggat
     8581 ccagttcaac aacctctcca tcctgcccaa cgccgagatg ggcgatccgg cctaccaggc
     8641 caagtacggc atggtcatgg tcgagtccaa gatcatcaac atccacggcg agcgggtcga
     8701 gctcgacgac gacgtcccgg agatccagga cctggtcgtc gccacggcgg ccatgccgca
     8761 tgccgattgg cgacgcaccc gcgtcttctg ctggatgacg gcgctgctgc acttcgacaa
     8821 gctgttccag atcccgctga tcctcgccca cggcatctcg agcatctcct accgcgatat
     8881 gatcgaggcc ttcatggcgg tcgagcctga acggttcccg ctgatcgccg agatcaacgc
     8941 tttcttccac agcgaagccc aatcgatcca gaagggcgga gccgagtacg tcttttccaa
     9001 ggagtatctc ggcatctatt ggccggccga cgagttcatc ttcgtgaagc tgacggccga
     9061 agggaaggtc gacgcgtttt acgccgaggc gggcgagttg ctgcgcgaga tcgtcagcgc
     9121 ccgcagcgct ggtttgccga ccgggatcat cgacgaagcc gtccggctga accatgcgct
     9181 ggtccaccag ccctttgcca agggggacct gaaagtccgc ctcggccacg atctgctgga
     9241 ttactggcgc aaggtgcgtg acggcgagca ggcgctgctc agcgaggcgc cgctggtcgt
     9301 cgagatcgac cgcaccagca agccctacga tgacttccag aaatggtgcc gcgagatcgt
     9361 ctggtggggc aacaagaagg gcgcctatct ctattcgccg cgcgccgccg cgatcacgcc
     9421 cgagctggcc ggccattact gaaccatgag ataccggccg ctgggcagga ccggccttgt
     9481 ggtttcggag atcggcttcg gcgcctgggg cattggcggg cgcaccgcca accagacgtc
     9541 gtacggcgat accgacgatc gcacctcgct cgccgccctt gcccgggcgc tggagcaggg
     9601 catcaccttc ttcgacacgt cggcggccta cggcgacggc cacagcgagg agctgatcgg
     9661 ccgggcggtg aggggcgtgc gctctcgcgt ggtcatcacg accaaggccg gctacgaatc
     9721 ctgggatcag ccgccggatt tttcgccgca agccatcgtc gcctcgaccg agcgaagcct
     9781 tctacggctg ggcaccgact acctcgacct tctgcagctc cacaatcctc cgttcgacgt
     9841 gctcacggcg cccgacgtgc gtgaagcgct ggcgcgcctt gtcacgagtg gaaagattcg
     9901 cgcctggggc atttcgagca agggaccgca ggaagcactg gaggcgctac gggcctgcga
     9961 cgttgcggtg atccaggcca acttcaacat gatggacgtg cgggcgctca ccagtggact
    10021 gctggccgag gtggcccgcg tcggcgccgg cttcatcgcc aggacgccgc tttgcttcgg
    10081 cttcctgtcg ggcacgatcc gccgcgacac ggaatttgcg ccgggagatc atcgcgcgcg
    10141 ctggccgcgc gcccagctcg cgaactggat cgacggcgct gccgatctgc ttgccgcgat
    10201 atcggcgtca cctggcgaag ccggcgtgca ggccgccctt cgcttctgtc tggcgttccc
    10261 ggcggtctcg agcgcgattc ccggcatcat gacaccggcc gaggctgatc agaacgccgc
    10321 cgccagcggt tttgggccgc ttgggcagca ggcggtcgac gcgatcctgg agatcaatcg
    10381 aaatcggcaa ttcttcgtcg cggacgcgca agcttcgtga cgaaatcgaa gaggttaccg
    10441 ccggcgaaga gatggccgcg gatgccggca gcggcggccg cctcgatgtc ggtctcgcga
    10501 tcaccgacca ggaacgatcg cgacgcatcg accgaccatt cggacagcaa tttcctgatc
    10561 atgccgggcg cgggcttgcg caggtcggaa acgcgcttgt agcgctcgac tgtaccctct
    10621 ggatggtagg gacagtattc gatgccgtcg atatgggcgc cgtgacggcg aagctccgcg
    10681 ctcatccagc catgaaggct gtcgacgtgt tcttcgctgt acagtccgcg cgcgatgccc
    10741 gcctggttgg tgacgacaaa caccagatag ccggcatcat tcagccaacg cacggtcttg
    10801 agcgcgccgt cgacccagcg aacctggtcg gcgcgatgga cgtagccggt atcctcgttc
    10861 agcacgccgt cgcgatcgag gaaggcggcg ggtcgtttca ggatcagcgg caccaggcgt
    10921 tgcgcgcggt cgaaatcctc cggcgtgccg atatcgatga acggcgcctc gaccacgcag
    10981 ccctcgacca gcccgtcctt ggccaaggcc ggcagcacgt cgcgctccag cgaacagggt
    11041 agcgatccga tccgcgatag gaccgccttg cgcatgagat agacgccggc attgatcggt
    11101 cgatccagcg ggccggaggg aatgaagtcg cgcacccgct ggccgtcgac ggcgaccagt
    11161 ccgtagcgct cgccgacgat gccgctggca agcgccatgc ggacccagct ggaaccaccg
    11221 tcgacggggc cggggcaaag gcccagccaa ttgaagtcga agagggaatc gccgtttacc
    11281 aggaagaacc aatcgtcgag ccgatcggca gccagcgcca aggcgccagc ggtcccggcg
    11341 ggggcggctt cgacaaccgt gtcgatggtc atgccgcgga ttgtgcggcc ccggtaggcg
    11401 gtgacgaggt cgtcggcgcg gtagccgcag agcagcaagg cgcgcttcaa cccatggcgg
    11461 ctggcctcgt ccagcaagtg gtcgaggaag gggcggccgc cgacgtcgag gacgggtttg
    11521 gccgtttcgc cggtcagtgt tcgcaaccgg cttcccaggc cgccgaccag gaagacgcct
    11581 tgctcgacgt tcatgccgtc gccgtgctgc cggccgtcgc ccatcctgcc cggcacagca
    11641 gcctctcctc gagcggctga tcgcccagtc cccagttttc cggttggcca agctcgggaa
    11701 cgatgccgtg cgcccattgc tcggcgggct tgacgaagtt gcgctcgatc gacgggccca
    11761 aaacaccttc gacgccggtg accttgcgct tgggataatc gaacacgctg cgcgtgatgg
    11821 tctgcaatcg ccaccagcgg aaattggtca tgatcctgtc gaccatggac tgaaagggag
    11881 accagacgta ggtgattcga ttggagaaca ggcgcgcatg gcggcccttg aaaatgcggc
    11941 aggcgggcgg aaggcagatt tcatgcgacc ccagtgccac cgccgcatgc atgatcagag
    12001 aatcgcaatc gagcgacagg accgtgttgt cgaggggaaa gccgcgaacg gtgtcccaca
    12061 tcttgcggct catcagcagg aagtcgccgc aggcattggt atggagctcg cggatgtacc
    12121 attgcggcgg atggggaatg aggctgtagc gcgtgctgtc gagactctcc aaacgcgcca
    12181 gcagcaggtc gtccggcaat tcctcgaggt ccctggcgga gagcgtgacg tcgcaacgat
    12241 cgcaacgata cagcgcgttc tcatgcagat cgcggcgcgc gatggtggcg atgatctcgt
    12301 ccgacaggta ggtatccgcg gccttgggcg acacaaagcg gccctgcgcg cggcgcaacc
    12361 cgacattggc ggcggcggcg gggttcatgc cccattcctg cgaaccgaca aacttccggt
    12421 gatgctcctg cccgacaatg acgccccgca cctggacgca gccgccttgc ggcaaggggt
    12481 ccagggactc gatgatcagg gggcggccgg acggcgggtt ccactcgacg aggatcaact
    12541 cggcctcgac ggcagcccgc tgcaactggc gaacgagaaa gctggtcgcc cgcctgactc
    12601 gcaagtcgaa atcgctggta taactgtcgt tgcggaagta cgagacgaaa gtaacgtatg
    12661 gccgggcgtt cacgttgagc tgtctcggat gattgtacga ccccaagcga tatacgggat
    12721 tcggcatccc gtcgtaaggg tatcggctgg cccttgaggt gcaatgctta atcgccgctt
    12781 tctgcactac ctagtcaaaa ttggatgagc gggcaagtcg tacggccgga tttgcgcagc
    12841 cgcctgtggc gccgcgcccg ggacttcgtg gcaagacgtc tcctgaggga ggctaacagg
    12901 atctggtcgg acgagccgca cgagatcgac cgggcgatcg agaaggtcga gcaggcatgg
    12961 tctctgacgc gcgaccccga gatcgccgtg cagttgagca cgatgtatga ccaggcaaac
    13021 cagaacccgc aggcgctcgt cgtgcttcgc gaggcgttcc gccgcaatcc acgacacgcg
    13081 ctggtcaggc atcacgcagc gataacgctg ctgaggcacg gtaccgcggc cgacgttcga
    13141 gatttcttcg acagcgtgtt gaaggtggat cgcaacgacg cctttgcgca attcgtcgtg
    13201 tctctgctcg acggctacga cggctgggtc gatgagctgg tctcgtcgat tcgcggtcaa
    13261 caagatgggc ggcagccgtt tgtcatttca tgcccggtct ggggccaacc gtttgccgat
    13321 gacttcgtgc gctactcctg cgcagcactg ctttcgccaa acaacctgcc gaagctggcg
    13381 gagcgctgct cgattcatat cgtcatcttc acgaccgccg cgacggaaag ccatctccgt
    13441 gccgatccgc tgtttgcgcg cttgagcgaa tacgcgactg ttggctttgt ccgctacagc
    13501 gacgcccaag tgaactatcg gcaggcgatg gaggcccatt acggtcacga aattgtcccg
    13561 cactcggatc actcgcttgc ctactactac gaacgcaact gcaagttcgc cctcatgtcc
    13621 tgtgcgcact acgtggcgct cgccgcgggc cggacgacgg atgcgttggt gagttgccag
    13681 gtcgccgata cgcttctgaa cgacggcgct ttgaccttca tggtagatcg catggctggc
    13741 ggggccgctg ccgtcctggt gaactgcatc cagatggatg gcgccgtcct gcgctccgtg
    13801 ctcgacgata aattccgtca cggcgatggc gtgatccaga tcccatcgga aagctgtgtg
    13861 aagatcctca gcgagcattt gccgccgtac aatctcgccc gagccggaaa tctcccgcaa
    13921 ataccgttgc gggtgtgctg gcgggtcggt gcccacggca tccttgtgca tggcaaccac
    13981 taccatccgt tttgcctgcg cccgaaggaa tttacacacc ctctgcaact taccgtcgat
    14041 ccgatcgaca gccggttcat cgatcgctcc tcgctcgata tggaccagat tcatctggtt
    14101 caggacgaaa gcgtcgtcgg actgtcaatg gaggacggtc cgctgcccga gcaatttgcc
    14161 cgcagagccg agccactctc tatcgccgag gcggcgttct ggttatgggg gtactggggc
    14221 cggctgcgag gggtattcta tcgcacaccg ctgcgcctgg gccgcgggat accgcgcgaa
    14281 gaatgggcgc aagcggagaa gaaagctgcc gccgtcgtcg atgccatcgt cgagcaggcg
    14341 tcccgcttcg aagagcggcg ccgggccagg ggttcatggc gtttgtgatc ggcgtaccgc
    14401 gcggttgtgc ggcggcggaa ttccgctact gtaacgcgat tgaccggctc aatttgaagc
    14461 tgcatatgaa gggcaggtct gtttgggcac gcaccaagaa ctgacgcgcg gtgttgctcg
    14521 cgagagcatt tttttggtca cgagcggtgg atgagcgcac gccagtgttg cctgtgcaag
    14581 gggagaaatc tttcgctcct tttcgccttg gacgaccttc cgatctctca ctacctcagg
    14641 aagacgcggg atgatccgga cccgcgattt tcggtcggct tcgagtgctg cggagattgc
    14701 ggtctgttgc agatcgtcga cgccattccc gccgacttga tctacggcga ggcggatacc
    14761 tacacgaccg gcttccagcg gccgaggcac ctcgaggacc tgatcacgac ggcggtggcc
    14821 cgccaggatc cggcaagggc gatcgacatc ggctgcaacg acggcgcgct cctggaagcc
    14881 ctgcgccgtg ccggctacag gcaggtcgtc ggtgtcgaac ccaatccggt cgccgcggct
    14941 gctgcccgcg ccaagggtca cgaggtccac accagttacc tgacgcccga gctcgcgact
    15001 cggctggtca ccgagagcgg cgcattcgat accgtctacg cgcggcatgt ggtcgaacat
    15061 gtcagcgatc tcgccagctt cttcgacgcc atccgcatct tgctgcggcc cgacgggttc
    15121 ctggtcgccg agctgcccga cgtggaggag ggcctcgctc tcggcagtcc ggccatcctg
    15181 tgggaagaac atgtgagcta cttcacccgg gccctggccg aatacatgct ggaacgcttc
    15241 ggcttccgta tttccgaccg ccgccgatac gtgttcggcg gcggatcgct ggctttcgtc
    15301 gcccagaaga aagcggttcc ggcgcactgc acggtcgccc gtcccgatcc ctcggcgacg
    15361 atcgcgacgc tgcaccgttt cgtcgccggc atgttcaagc agaaaagcga gatgaggaac
    15421 ctggtttcgc tcgcccggtc gaacggctac cgcatcctgg tctacggcgc cgcgccgcgc
    15481 tcctgcctgc tggtctccgt ctgccagatc gccgggatga tcgacctggt cgtcgacgat
    15541 cgccaggaca tccatggtcg attgatgccg ggaacccagt gcgtcgtcca tccgctgaag
    15601 gaggtcgcca gcgaggccgg cggcaagatc ctctgtctgc tgggtgtggg gtcggagaac
    15661 gagttcaagg tccgggccaa gctcgaggcg gccgtggagg cacgtcttgc cttcgtcagc
    15721 ctattcccgc cgcgcaacac gctggaaagc atcgccgaag cgcggcgcat catcggcgcc
    15781 gaccagaaat gaaggatgac tcgtcaatgt cgcgcatcga cctgccgctt cagcccaatg
    15841 gctacaaggt ccagtggtct tacctgccca agcagttcag cgcagagaat atcgaggaaa
    15901 tcctcgacct gttccgcaag ttcgttccga ccggcgactt cacgctgggc aagccggtgc
    15961 gcgagttcga gcacaagttc gcggcgatga tcggcacccg tcatgccatc ggcgttaact
    16021 cgggcaccga cgcgctaaaa ctgtcgctca aggccgcagg cgtcggcccg ggcgacgagg
    16081 tgatcacgac ggccaacacc ttcatcgcca ccgtgggcgc cattgccgag acctacgccc
    16141 gcccggtctt cgtcgactgc accgacaatt tctgcatgga cgtcagccag gtcgaggcga
    16201 ggatcaccaa gcgcaccaag gcgctcctgc cggtacacct ggcgggccag atgacggaca
    16261 tgccggcgct catggaggtc gccaacaagc atggtctgcc ggtgatcgag gattcctgcc
    16321 aatgcatcct cggcaatatc gagggcagga aggccggcac cttcggccac gccggcggct
    16381 tttcgcttca tccgctcaag aacctcaacg tctgggcgga cggcggcatg atcgtcaccg
    16441 acgacgacga gttcgcgacg cttctgcggc agctgcgcaa ccacggcctg aaggaccgcg
    16501 acagcgtcgt ccgcatgggc tgcaattcgc ggctcgactc gctgcaggcg gtggtcggca
    16561 actggctgat cggccaggtc gatttcatca ccgacacccg gatcaggaac gccgcctatc
    16621 tcgatcgcgg gctcggccgt atcccccaga tcagcctgcc gcggcgcttc aacaaccgga
    16681 agctggtgtt ccacctctat atcgtgttcg cccaacggcg ggacgagctc ttggcccatt
    16741 gcaagaagcg gggaatcgag gccaaggtgc actatccggt gccgttgtac ctccaggagg
    16801 gcttgcgtcc ctatggctac aagaagggcg atttcccggt gacggaccgg caggccgaca
    16861 cg
//
LOCUS       DASWGA010000049         5139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1398222, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000049 DASWGA010000000
VERSION     DASWGA010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5139
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1398222"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="VF991_00995"
     CDS             <1..454
                     /locus_tag="VF991_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkane 1-monooxygenase"
                     /protein_id="HEX9555037.1"
                     /translation="VEIGAAKSGRTPDRGEWRMVREVFVADTDAEAMRLSAGSYMGRM
                     MREYFMPLLGQFGFLDFLKHDPGTADSDVTPEYCARHNWIVGSPRTVVEKIEKIYDEV
                     GGFGQLLVFGFDYADNPQAWRHSLELLSREVLPKVQKLKPAPVKLAAE"
     gene            468..995
                     /locus_tag="VF991_01000"
     CDS             468..995
                     /locus_tag="VF991_01000"
                     /inference="COORDINATES: protein motif:HMM:NF022517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2867 domain-containing protein"
                     /protein_id="HEX9555038.1"
                     /translation="MAGSTVSRRRTPPASAFLRDLGGFYYWDSYEAPLSRGNLAMHEI
                     YLALFAHHPPWARWLLILRGWIVAPFGLKATTAADLDAIEIKPAYAVGDKIARFTLYG
                     QSDSEIVTGGDDRHLDFRVSVRKLTDRGVSRVVLSTVVSPHNFFGKAYLFAILPFHRL
                     GVRTMLSNAIEAGRL"
     gene            complement(1140..1760)
                     /locus_tag="VF991_01005"
     CDS             complement(1140..1760)
                     /locus_tag="VF991_01005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX9555039.1"
                     /translation="MVLPVVRFAAIVGLLWALPAVGQSAPAWIAALQGGGHVIVLRHG
                     ATYADQADTNPLDLKDTAHQRQLNDAGRAAAKSMGDALRKLKIPVGKVQTSLFQRAVE
                     TGTLLGVGDVSSTADISEGGLVVSPNENNRRTAALRTLAATPPAAGTNVVLVSHKPNI
                     MDAFGKDWFDVREGEASIFRPDGKGGYTLVARVPAAEWTRLAQAAP"
     gene            1908..2198
                     /locus_tag="VF991_01010"
     CDS             1908..2198
                     /locus_tag="VF991_01010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555040.1"
                     /translation="MAISRRTLIERIDRFIRSIENHKGEPDHWEGHCTLQALAEVNAG
                     DVERAEAKLILARTPPALREPQDKASVPADGRLPTAAELRLELERIRSQALA"
     gene            complement(2338..>5139)
                     /locus_tag="VF991_01015"
     CDS             complement(2338..>5139)
                     /locus_tag="VF991_01015"
                     /inference="COORDINATES: protein motif:HMM:NF015737.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HEX9555041.1"
                     /translation="VTGPGSTWTIGGLGLTVGGGTTGGPGSLTIANGGVVSVNGGVFV
                     GDPSLGTSAVTVTGPGSVLTAQTSLRIGDTCDCLVGTLTVANGGVVNSPGFTRIGAGS
                     TLNLGNGGLAGAIVTPTIDNRGSIAQSSGVNLAGAGAQFDISAANGARTIKDLSGVAG
                     STVQLGNNALVVGTANSTTFAGILDDSSNPGGSLVKQGSSTLTLTGNNTYSGGTTINA
                     GLINFAATNNFGTGAITLNGGGLQWATGNTIDISSRLAPLGASGGTFDTNGNNVTLGS
                     VISGTGRLTKAGNGVLTLIAANTYSGGTTVTGGLISFSALNNFGSGAITLNGGGLQWA
                     SGSTADISSKLAPLGAGGGVFDTNGNTITFASALSGTGGLTKQGSGLLNLTANNTYTG
                     ATAVNAGTLAVNGSITSNVTVGSGGTLGGNGTITGTVSNAGILAPGNSIGTLTVNGSY
                     TQAAGSTYQVEVNAAGQNDRINVTGAPGTATINGGTVQVLAASGSYANSTTYTILNAT
                     GGRTGTYSGVSSNFAFLTPTLTYDPNNVFLTLAIQQSTGFAAGGITPNQKAVGFALNQ
                     SFANASGDFATVIGALAGLSVFQGPQALNALSGEQYADFGTMNVNNSAMFMNAIGQQM
                     ANARGTTGGGQRQALAQACEIAACDGASPFSVWASALGGLGSVSGDFNASTASYNFGG
                     AAAGIDYRLDPRFLVGIGAGYTAGNLWVNNFLGKGNTDSVAVAAYGSFTQDGFYVDAL
                     GGYAYFSNQLQRQILIPGLQPRTANGAAGANQALGQVETGYRVGVFAPAAATVTPFAR
                     LQGSSVTENAFSEWGAQSLSLNVAQQTTNSLRSTFGADLAGAVPIGDTRTLDLDLRLG
                     WQHEFASTTRPITAALAGAPFAAFTVYGATPQPDSAVVSFTAKTTIAAATQLYLRYDG
                     DIGSGTDNHALNLGVRFSW"
BASE COUNT          810 a         1662 c         1821 g          846 t
ORIGIN      
        1 ggtggagatc ggcgccgcca aatcgggccg cacgcccgac cgcggcgagt ggcgcatggt
       61 gcgcgaggtg ttcgtggccg acaccgacgc cgaggcgatg cggctgtcgg ccggctccta
      121 catgggccgc atgatgcggg aatatttcat gcccctgctc ggccagttcg gcttcctgga
      181 ttttctcaag cacgatccgg gcaccgccga ttccgacgtc acgcccgaat attgcgcccg
      241 gcacaactgg atcgtcggct cgcccaggac cgtcgtcgag aagatcgaga agatctacga
      301 cgaggtcggc ggcttcggcc agttgctggt gttcggcttc gactacgccg acaatccgca
      361 ggcctggcgg cattcgctcg agctgctgtc cagggaggtc ctgcccaagg tgcagaagct
      421 caagcccgcg ccggtcaagc tggcggcgga gtagcctgcg aaatagcatg gccggcagca
      481 cggtcagccg acgccgcacg ccacccgcca gcgccttcct gcgcgatctc ggcgggttct
      541 actactggga ctcctacgag gcgccgctca gccgcggcaa cctcgccatg cacgagatct
      601 acctcgcgct gttcgcccat catccgccct gggccaggtg gctcctgatc ctgcgcggct
      661 ggatcgtggc gccattcggc ctcaaggcga ccaccgcggc cgacctcgac gccatcgaga
      721 tcaagccggc ctacgcggtc ggcgacaaga tcgcgcgctt caccctgtac ggccagagcg
      781 acagcgagat cgtcaccggc ggcgacgacc gccatctcga tttccgggtg tcggtgcgga
      841 aactgaccga ccgcggcgtg agccgggtcg tgctgtcgac ggtggtgagc ccgcacaatt
      901 tcttcggcaa ggcgtatctg ttcgccatcc tgccctttca ccggctgggc gtcaggacga
      961 tgctctcgaa tgcgatcgaa gcgggccggc tgtgaacgac gccgcgcaag agcctgttcc
     1021 ggttgaatgg aatcatgctc ttccggaccg cgcgcgtccc gcgcgctcat gagccacacg
     1081 tgaatgcgcc gacatgagcg agccagaggc tcgcggtccg gaagagcatg aaagacgcat
     1141 caaggcgccg cctgcgccag gcgcgtccac tccgcggccg gcacgcgcgc caccagggtg
     1201 tagccgccct tgccgtcggg ccggaagatc gaggcctcgc cctcccggac gtcgaaccag
     1261 tccttgccga aggcgtccat gatgttgggc ttgtggctca ccaggacgac attggttccg
     1321 gccgccggcg gcgtggccgc gagcgtgcgc aaggccgccg tccggcggtt gttctcgttg
     1381 ggcgagacga ccaggccgcc ctcgctgatg tcggccgtcg acgacacgtc gcccacgccc
     1441 agcagcgtgc cggtctcaac cgcccgttgg aacaggctgg tttggacctt tccgacgggg
     1501 atttttagct tgcgcagcgc gtcgcccatc gatttggccg cggcgcggcc ggcgtcgttg
     1561 agctgccgct ggtgggccgt atccttgagg tcgagcgggt tggtgtcggc ctggtcggcg
     1621 taggtcgcgc cgtggcgcag cacgatgaca tggccgccgc cctgcagcgc ggcaatccag
     1681 gcgggcgcgg actgaccgac ggcaggcagc gcccacagga gccccacaat cgcggcgaag
     1741 cgaacgacag gcagcaccat gacatctccc cccccaaggg caggcagcaa aggagacggg
     1801 agaataggcc gaacgatggg agcggcgctt gtggggaaag tcacagacgc ctggggacaa
     1861 ggtgctacgg agggcgcaga gcaaccgtaa acggcagagg acgagccatg gccatcagtc
     1921 gacgaacgct gatcgaacgc atcgatcgct tcatccgctc aatcgagaac cacaagggcg
     1981 agcccgacca ttgggagggc cattgcaccc tgcaggcgtt ggccgaggtc aacgcgggcg
     2041 acgtcgaacg ggccgaagcg aaattgatcc tggccaggac gccaccggcg ctgcgcgagc
     2101 cccaggacaa ggccagcgtg ccggcggatg gccgcctccc gacggcagcc gagttgcgcc
     2161 tcgagctcga gcggatcagg tcgcaggcgc tcgcctaggg gagtctgttc cggttgaata
     2221 gactcaagct cttctggacc gcgagcctct tcagggcgaa gtttacttcg cccgaatcgc
     2281 tcaggatcat gagcgagcca gaggctcgcg gtccggaaga ggatgaaagc gaggcgctca
     2341 ccagctgaag cgcacgccga gattgagcgc gtggttgtcg gtgcccgatc cgatgtcgcc
     2401 gtcatagcgc aggtagagct gcgtggctgc ggcgatggtg gtctttgcgg taaagctcac
     2461 caccgcgctg tcgggttgcg gcgtggcgcc gtaaacggtg aaggcggcaa acggcgcgcc
     2521 ggccagcgcc gccgtgatcg gccgcgtcgt cgaggcaaac tcgtgctgcc agcccagcct
     2581 gagatcgagg tcgagggtgc gggtgtcgcc gatcgggacc gcaccagcga gatcggcgcc
     2641 aaaggtggag cgcagggagt tggtggtctg ctgcgccacg ttgaggctga gcgactgcgc
     2701 gccccattcg ctgaacgcgt tttcggtgac gctcgatccc tggaggcggg cgaacggggt
     2761 gacggtggcc gccgccggcg cgaacacgcc gaccctgtag ccggtctcga cctggcccag
     2821 cgcctggttg gcgccggccg caccgttggc ggtgcgcggc tgcaggccgg ggatcaggat
     2881 ctgccgctgc agctggttgg agaagtaggc gtagccaccg agagcgtcga catagaagcc
     2941 gtcctgggtg aacgagccgt aggctgccac cgcaaccgag tcggtgttgc ccttgcccaa
     3001 gaagttgttc acccagagat tgccggcggt atagccggcg ccgatgccga ccaggaagcg
     3061 cggatcgagg cgatagtcga tgccggcggc agcgccgccg aagttgtagg acgccgtcga
     3121 ggcgttgaag tcgcccgaca cgctaccgag gccgcccagc gcggaggccc atacgctgaa
     3181 ggggctggcg ccatcgcagg ccgcgatctc gcacgcctgg gccagcgctt gccgctggcc
     3241 gccacccgtc gtgccgcgcg cattggccat ctgctggccg atggcattca tgaacatggc
     3301 gctgttgttc acattcatgg tgccgaagtc ggcgtactgc tcgccgctca gggcattgag
     3361 cgcctgcggg ccctggaaca cgctcaagcc cgccagcgcg ccgatcaccg tggcgaagtc
     3421 gccgctggca ttggcgaacg actggttgag cgcgaagccc accgccttct ggttgggcgt
     3481 gatgccgccg gcggcgaagc cggtgctctg ctggatcgcc agggtcagga acacgttgtt
     3541 gggatcgtag gtgagcgtgg gcgtcaggaa ggcgaagttg ctgctcacgc ccgaataggt
     3601 gccggtgcgc ccgccggtgg cattgaggat ggtgtaggtc gtgctgttgg cgtagctgcc
     3661 cgaggcggcc agcacctgca ccgtgccgcc gttgatggtc gcggtgcccg gcgcgccggt
     3721 gacattgatg cggtcgttct ggcccgccgc gttgacctcg acctgatagg tgctgccggc
     3781 cgcctgggtg taggacccgt tcaccgtcaa ggtgccgatc gagttgcctg gcgcgaggat
     3841 gcctgcgttg ctgacggtac cggtgatcgt gccgttgccg cccagcgtac cgcccgagcc
     3901 cacggtgacg ttgctggtga tgctgccgtt caccgccagc gtgccggcgt tgacggcggt
     3961 ggcgccggtg taggtgttgt tggcggtgag gttcagcagg ccgctgcctt gcttggtcaa
     4021 accgccggtg ccgctgagcg ccgaggcgaa ggtgatggtg ttgccgttgg tgtcgaagac
     4081 gccgccgccg gcgccgagcg gcgcgagctt cgacgagatg tcggcggtgc tgccgctcgc
     4141 ccattgcagg ccgccgccgt tcagggtgat cgcgccgctg ccgaaattgt tcagcgccga
     4201 gaagctgatc aggccaccag tcaccgtcgt gccacccgag taggtgttgg ccgcgatcag
     4261 ggtcagaacg ccattgcccg ccttggtcag gcggcccgtg cccgatatca ccgagcccag
     4321 ggtgacgttg ttgccgttgg tgtcgaaggt gccgccgctc gcgcccagcg gggccagtcg
     4381 cgaggagatg tcgatcgtgt tgccggtggc ccattgcagg ccgccgccgt tcagcgtgat
     4441 cgcgccagtg ccgaagttgt tggtcgccgc aaaattgatc aggccggcgt tgatcgtcgt
     4501 gccgccggag taggtgttgt tgccggtgag ggtgagcgtg ctgctgccct gcttgaccag
     4561 gctgccgccg gggttgctgc tgtcgtcgag gatgccggca aaggtcgtcg agttcgccgt
     4621 gcccacgacc agcgcattgt tgccgagctg gaccgtcgac ccggcgacgc cgctcaggtc
     4681 cttgatcgtg cgggctccgt tggccgccga gatgtcgaac tgggcgcccg cgccggccag
     4741 gttgacgccg ctcgactggg cgatgctgcc gcgattgtcg atcgttggcg tcacgatcgc
     4801 gccggcaagg ccgccattgc cgagattgag cgtgctgccg gcgccgatcc tggtgaagcc
     4861 cggcgaattg acgacgccgc cgttggcaac ggtgagcgtg ccgaccaggc aatcgcaggt
     4921 atcgccgatc ctgagcgaag tctgcgcggt caagaccgag cccggtccgg tcaccgtcac
     4981 cgcagaagtg ccgagcgagg gatcgccgac gaacacgccg ccgttgacgc tcactacgcc
     5041 cccgttggcg atcgtaaggc tgcccggtcc gccggtggtg ccgccgccga ccgtgaggcc
     5101 gaggccaccg atcgtccagg tcgatccggg accggtcac
//
LOCUS       DASWGA010000050         1677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_512424, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000050 DASWGA010000000
VERSION     DASWGA010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512424"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VF991_01020"
     CDS             <1..220
                     /locus_tag="VF991_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555042.1"
                     /translation="DWENTLAIAKAIHHPGTQANVVTTEFSDWATNCPEYKVTAVHVS
                     PSNGPSEWQSEYVEQASHSRPIAKVTAE"
     gene            226..369
                     /locus_tag="VF991_01025"
     CDS             226..369
                     /locus_tag="VF991_01025"
                     /inference="COORDINATES: protein motif:HMM:NF022832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit delta"
                     /protein_id="HEX9555043.1"
                     /translation="MSADKLVKMANQIGKFFTPPRGSDAAAAIADHLQKFWDPRMRAA
                     IIA"
     gene            452..880
                     /locus_tag="VF991_01030"
     CDS             452..880
                     /locus_tag="VF991_01030"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9555044.1"
                     /translation="MKPAGEFTIVFEQADGAEAQLVRDRLDMFNIGVTGVSAYYPVHF
                     FLKSERGETMGGLLGGIWGGWLHITYLWIDEAARGRRWATKLMDLAEAYGRERGCHSV
                     TLDTHSFQARPFYEKRGYEIFGTLDDYPKGHKKFFLRKKL"
     gene            complement(921..>1677)
                     /locus_tag="VF991_01035"
     CDS             complement(921..>1677)
                     /locus_tag="VF991_01035"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEX9555045.1"
                     /translation="PIDRFAPPPVPAAAPAPAAEQRPAAATPIRGASSPLPVRAPVPL
                     ESPQLVEDARELARRCGTIAELETAIRAFEGCALKRTAKNTVFADGVAGAPVMVVGEA
                     PGGDEDRLGKPFVGVSGQLMDRMFDAIGMSRARDLYITNILFWRPPGNRTPTLAEQAI
                     CLAFTRRHIELARPKVLVLAGGTAAKAVLDTTEGIMRLRGKWTSLRLDDGSELPTLPT
                     FHPAYLLRTPASKRQSWSDLLALDKKLKELGVK"
BASE COUNT          300 a          532 c          575 g          270 t
ORIGIN      
        1 cgactgggag aacactttgg cgatcgccaa ggcgatccat cacccaggga cgcaggccaa
       61 cgtagtcacc acggagttct ccgactgggc gaccaactgt ccggaataca aggtcaccgc
      121 cgtccacgtg tcgccgtcca acggccccag cgaatggcaa agcgaatatg tcgagcaggc
      181 gagccacagc cggcctattg ccaaggtcac ggcggagtag atccgatgtc cgccgacaag
      241 ctggtgaaga tggccaatca gatcggcaag ttcttcacac cgccgcgcgg gagcgatgcg
      301 gccgcagcca tcgccgacca cctgcagaaa ttctgggatc cgcgcatgcg tgccgctatt
      361 atcgcctagg tggcagccgg cggcgcgggc ctcgatggtc cggtgcgaga agctatcggc
      421 cgcctgaagg aagccaaggg cggggcgact gttgaagccg gcaggtgagt tcacgatcgt
      481 cttcgaacag gcggatggcg ccgaggcgca actcgtgcgc gatcgcctcg atatgttcaa
      541 tatcggtgtc accggcgtgt cggcctatta cccggtgcac ttcttcctga aaagcgagcg
      601 cggcgagacg atgggcggcc ttttgggcgg catctggggc ggctggctgc acatcactta
      661 tctctggatc gacgaggccg cgcgcggccg gcgatgggcg acgaagttga tggacctggc
      721 cgaagcctat ggccgcgaac gcggctgcca ttcggtcacg ctcgataccc actccttcca
      781 ggcgcgcccc ttttacgaaa agagaggcta cgaaatcttc ggcacgctcg acgactatcc
      841 caagggccac aagaagttct tcctgaggaa gaagctgtag tccggtcgtc gaggcatcga
      901 cgccagccaa ggcgaataaa ctactttacg cccagttcct tgagcttctt gtcgagcgcc
      961 aaaagatccg accagctctg gcgcttgctg gcgggggttc gcaaaagata ggcgggatgg
     1021 aaggtgggca gggtcggcaa ctcgctgccg tcgtcgagcc gcaggctggt ccatttgccg
     1081 cgcaaccgca tgatgccctc ggtcgtgtcg agcacggcct tggcggctgt cccgccggcc
     1141 aggaccagca ccttgggcct cgcaagctcg atatggcgac gcgtgaaggc gaggcagatc
     1201 gcctgctcgg cgagggtcgg cgtgcggttg ccgggcgggc gccagaacag gatgttggtg
     1261 atgtagaggt cgcgcgcgcg gctcatgccg atggcgtcga acatgcggtc catgagctgg
     1321 ccgctcacgc cgacgaacgg cttgcccaac cggtcctcgt cgccgcccgg cgcctcgccc
     1381 accaccatga ccggcgcgcc ggccacgccg tcggcgaaca cggtgttctt ggcggtgcgt
     1441 ttcagcgcgc aaccttcgaa ggcgcggatg gctgtctcga gttcggcgat ggtgccgcag
     1501 cgccgcgcca gctcccgcgc atcctcgacc agttgcggcg attcgagcgg aaccggcgcg
     1561 cggaccggca gaggggagga cgcgccgcgg atcggcgtgg ccgccgcggg acgttgctca
     1621 gccgccggtg cgggcgcagc cgccggcacc ggtggcggcg cgaagcggtc gatcgga
//
LOCUS       DASWGA010000051         2041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_5081, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000051 DASWGA010000000
VERSION     DASWGA010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5081"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VF991_01040"
     CDS             <1..322
                     /locus_tag="VF991_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEX9555046.1"
                     /translation="GPDGTWRLAPSDAIGVGKHKLRLDRLTKDGKPVARLELPFERVP
                     VSPGTGDGRRLVVVRGDNLWNIARAHYGHGMHHTLIFGANKDQIRDPDLIYPGQVFSL
                     PKVN"
     gene            350..1042
                     /locus_tag="VF991_01045"
     CDS             350..1042
                     /locus_tag="VF991_01045"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEX9555047.1"
                     /translation="MLTNFFVPILDDGWRFIAIFAFVTLLAALTGIAWLFWPLMALTL
                     WSIFFFRDPPRGVPQDDGVLIAPADGLVQMVSEAVPPAELGLGGEPLTRVSIFLSVFD
                     GHINRSPCAAIVDVVAYRPGKFLNANADKASEDNERMAIALRRADGRVIGCVQIAGWV
                     ARRIVCTIKPGQAVAAGERFGHIRFGSRTDLYLPPGARLLVAAGQRMIGGETVMAELD
                     PVTTEPRRIIEF"
     gene            1166..1999
                     /gene="pssA"
                     /locus_tag="VF991_01050"
     CDS             1166..1999
                     /gene="pssA"
                     /locus_tag="VF991_01050"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEX9555048.1"
                     /translation="MDSDFRSPRGRLRGFSINRLIPNVLTLAALCSGLTAIRFALQGD
                     LKLAVIAVIVAAIFDALDGRVARRLGVASRFGAELDSLSDFLCFGVSPALVLYLASLK
                     DAGALGWVVTLMFPMCSALRLARFNTALLADTPPPAWTGSYFTGVPAPAGALLALIPL
                     MVSFEIEAAWPRHALVVGTVLVVVGGLMVSRLPTFSFKKGRVPRHLVLPLLLAAALVM
                     GVLASSPWIGLSLLGLGYASLIPISWITYRRQAARDREASAAGDVVTLRAVDAGSPPS
                     D"
BASE COUNT          262 a          698 c          700 g          381 t
ORIGIN      
        1 gggccccgat ggaacctggc ggctcgcgcc gtccgatgcg atcggcgtcg gcaagcacaa
       61 gctgcggctc gaccggctga ccaaggacgg caagccggtg gcccgcctcg agttgccgtt
      121 cgagcgcgtt ccggtatcgc cgggcaccgg cgacggccga cgcctggtcg tcgtgcgtgg
      181 cgacaatctg tggaacatcg cgcgcgcaca ctacggccac ggcatgcatc acaccctgat
      241 cttcggcgcg aacaaggatc agatccgcga tccggacctg atctacccgg gtcaagtctt
      301 cagcctgccc aaggtcaact gacgggcggc gggcgacaga gagtctttca tgctgacaaa
      361 ttttttcgtg ccgatcctcg atgacggctg gcgcttcatc gcgatcttcg ccttcgtcac
      421 cttgcttgcg gcgttgaccg gcatcgcctg gctgttctgg ccgctgatgg cgctcaccct
      481 atggtcgatc ttcttcttcc gcgacccgcc gcgcggcgtg ccgcaggacg acggcgtgtt
      541 gatcgcgccg gccgacgggc tggtacagat ggtgagcgaa gccgtgccgc cggccgagct
      601 cgggctgggc ggcgagccgc ttactcgggt gtcgatcttc ctcagcgtct tcgacgggca
      661 catcaaccgc tcgccctgtg ccgccatcgt cgacgtcgtg gcctaccggc cgggcaaatt
      721 cctcaatgcc aatgccgaca aggcgagcga ggacaacgag cgcatggcca tcgccttgcg
      781 ccgcgccgac ggacgcgtga tcggctgcgt gcagatcgcc ggatgggtgg cgcgccgcat
      841 cgtctgcacc atcaagccgg ggcaggcggt ggcggcgggc gagcgcttcg gccacatccg
      901 cttcggcagc cgcaccgacc tctatctgcc gcccggcgcg cgattgctgg tggcggccgg
      961 acagcgcatg atcggcggcg agacggtgat ggccgagctc gatccggtca cgaccgagcc
     1021 gcggcggatc attgagttct aggctggggg cgcgccactg cgcgcggagt aacctccgcg
     1081 ctgaagtggc gcgtcatcgt cggtatcgca tgatcacgcc actggagtgg cgcgccccca
     1141 gcgaaagaga agtaggagtc tcgcgatgga cagcgatttt cgcagcccgc gtggccggtt
     1201 gcggggtttt tcgatcaatc ggctgatccc caacgtgttg accctggcgg cgctctgctc
     1261 ggggctgacg gcgatccgct tcgcgctgca gggcgatctg aagctcgccg tcatcgccgt
     1321 catcgtcgcc gccattttcg atgctctcga cggccgcgtc gcccgtcgcc tgggcgtcgc
     1381 cagccgcttc ggcgccgagc tcgattcgct gtcggacttc ctctgcttcg gcgtctcgcc
     1441 tgccctggtg ctttacctcg cttcgctgaa ggacgccggc gcgctgggct gggtcgtcac
     1501 cctgatgttt cccatgtgct cggcgctgcg gctggcgcgc ttcaacacgg cgttgctggc
     1561 cgacacgccg ccgccggcct ggacgggctc ctacttcacc ggcgtgcccg cgccggccgg
     1621 cgccctgctg gcgctgatcc cgctgatggt gagcttcgag atcgaggccg cctggccgcg
     1681 tcacgcgctg gtcgtcggca cggtgctggt cgtggtcggc ggcctgatgg tgagccggct
     1741 gccgaccttt tccttcaaga agggcagggt ccctcgccat ctggttttgc cgttgctgct
     1801 cgcggcggcg ctggtgatgg gcgtgctggc gagctcgccc tggatcggcc tgtcgctgct
     1861 gggcctcggc tatgcctcgc tcattcccat cagttggatc acctatcgcc gccaggcggc
     1921 gcgggaccgc gaggccagcg cggccggtga cgtcgtgacc ttgcgcgccg tcgatgcggg
     1981 atcgccgccc agcgactgag cgcggttcgc gatgctcgat cccatgctgc gccggtgggt
     2041 c
//
LOCUS       DASWGA010000052         2187 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_132676, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000052 DASWGA010000000
VERSION     DASWGA010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132676"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..814)
                     /locus_tag="VF991_01055"
     CDS             complement(<1..814)
                     /locus_tag="VF991_01055"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEX9555049.1"
                     /translation="MRIAIVSDAWRPQINGVVRTIETVAQLLRAEGHDVEVFGPDRFR
                     TVPCPTYPEIRLSLFPAARLAHMLKLYAPDAIHLVTEGPLGWAARAFCLKRDIPFTTA
                     YHTRFPEYVRARIRLPMAWSYAFVRRFHAPSSAVLVVAQSIRDELTERGFKNLVPWSR
                     GVDIAAFHPRRRSAAGEPRPIWLYAGRVAIEKNIKAFLELDLPGSKWVVGGGPQLKEL
                     KRRYPDVRFFGSVDTQELSRRYVEADCFVFPSRTDTFGLVMVEALASGVPVAG"
     gene            complement(820..1635)
                     /locus_tag="VF991_01060"
     CDS             complement(820..1635)
                     /locus_tag="VF991_01060"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEX9555050.1"
                     /translation="MTVIERHPPARHRTIFLSDIHLGTRGCQAELLLDFLKKNESENL
                     YLVGDVVDGWRLKRWWYWPQSHNDVVQKILRKARKGTNVVYIPGNHDEAARQYCQLTF
                     GEVRVEEEAIHVMADGRKLLVIHGDQFDGIVRYARWLAILGDWAYATALRINTTFNWG
                     RRKLGLPYWSLSAYLKHKVKNAVQFIDNYEHAVATEARRRGVHGVVCGHIHHAEIRTI
                     GGILYCNDGDWVESCTALVEDFDGCLRIVRWAEEHARRESALPRLSPARLAAQ"
     gene            1743..>2187
                     /locus_tag="VF991_01065"
     CDS             1743..>2187
                     /locus_tag="VF991_01065"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylglycerol kinase family protein"
                     /protein_id="HEX9555051.1"
                     /translation="MTFVASKTMLLILNPTAGRRRRGLVDAVVRCVRAEGWTVDVVET
                     GAAGDARRLAESCDAACHAVIAVAGGDGTINEVVNGLAARRDTTPALGIVPLGTANVS
                     AHELGLGFSAAAIARTMTAGRELLVQPGQATNGASSPRCFSLMAGA"
BASE COUNT          371 a          688 c          779 g          349 t
ORIGIN      
        1 agcccgccac cggcacgccg gaggccagcg cctcgaccat gaccaggccg aatgtgtcgg
       61 tgcggctggg aaagacgaaa cagtcggctt cgacgtagcg gcgcgacagt tcctgggtgt
      121 cgaccgagcc gaagaagcgc acatcagggt agcggcgttt cagctccttg agctgcgggc
      181 cgccgcccac cacccatttg ctgcccggca ggtcgagctc gaggaaggct tttatgttct
      241 tctcgatcgc cacccgcccg gcatagagcc agatcgggcg cggctcgccg gcagcgctgc
      301 gccggcgcgg atggaaggcc gcgatgtcga cgccgcgcga ccacggcacc aggttcttga
      361 agccgcgctc ggtgagctca tcgcggatcg attgggcgac caccagcacg gcggacgacg
      421 gcgcatggaa gcggcgcacg aaggcgtagc tccaggccat gggcaggcgg atgcgggcgc
      481 gcacatattc gggaaagcgc gtgtggtagg cggtggtgaa gggaatgtcg cgcttgaggc
      541 agaaggcgcg cgccgcccag cccagcggac cctcggtgac gagatggatc gcgtcgggcg
      601 catagagctt cagcatgtga gcgagccgcg ccgcgggaaa cagcgagagc cggatttcgg
      661 ggtaagtcgg gcagggcacg gtgcggaaac ggtcgggacc gaacacctcg acgtcgtgac
      721 cctcggcgcg caggagctgt gccacggtct cgatggtgcg caccacgccg ttgatctgcg
      781 gtcgccaggc gtcggagacg atggcgatgc gcaacgggtc tactgcgccg ccaaccgggc
      841 cgggctgaga cgcggcagcg cgctctcgcg tcgcgcatgc tcttcggccc agcgcacgat
      901 gcgcaggcag ccgtcgaaat cctcgaccaa agcggtgcag ctctcgaccc agtcgccgtc
      961 gttgcaatag aggatgccgc cgatggtgcg gatctcggcg tggtggatgt gaccgcagac
     1021 cacgccatgg acgccgcgcc ggcgcgcctc ggtcgcgacg gcgtgctcgt agttgtcgat
     1081 gaactgcacc gcgttcttga ccttgtgctt caggtaggcc gacagcgacc agtagggcag
     1141 gccgagcttg cggcggcccc agttgaacgt cgtgttgatg cgcagcgccg tggcataggc
     1201 ccagtcgccc aggatcgcga gccagcgcgc atagcgcacg atgccgtcga actgatcgcc
     1261 gtgaatgacc aggagcttgc ggccgtcggc catgacgtgg atcgcctcct cctcgacgcg
     1321 cacctcgccg aaggtgagct ggcaatactg ccgcgccgcc tcgtcgtgat tgccggggat
     1381 atagaccacg ttggtgcctt tgcgggcctt gcgcaggatc ttctgcacca cgtcgttgtg
     1441 gctctgcggc caataccacc agcgcttcag ccgccagcca tcgacaacgt cgccgaccaa
     1501 gtacagattc tcgctctcgt tcttcttcag gaagtcgagc agcagttcag cctggcagcc
     1561 gcgggtgccg agatgaatgt cagaaagaaa gatcgtgcgg tgacgggcag gcgggtgacg
     1621 ctcgatcacg gtcatgtgga taagactcga ccggcacaaa atgtgtcgtg cgcgattgca
     1681 cgagacgcag cggattgtgt atgtcagcca ttgcgtcact gtgaatcggt tgtgacagtt
     1741 cgatgacgtt cgtcgcctcc aagacaatgc tgctgatcct caatccaacg gccggccgcc
     1801 gccgccgcgg gctggtcgac gccgtcgtgc gctgtgtgcg cgcggagggc tggacggtcg
     1861 acgtggtcga gacaggggcg gcgggcgatg cgcggcgtct ggccgaaagc tgcgatgcgg
     1921 cctgccacgc cgtgatcgcc gtcgccggcg gcgacggcac gatcaacgag gtggtgaacg
     1981 ggctcgctgc acggcgcgat acgacgccgg cgctgggcat cgtgccgctc ggcaccgcca
     2041 atgtttcagc gcacgaattg ggcctcgggt tttcggcggc ggcgatcgcc cggaccatga
     2101 cggcggggcg tgaactgctg gtgcagcccg gccaggcgac caatggcgcg agcagcccgc
     2161 gctgcttctc gctgatggcg ggcgcgg
//
LOCUS       DASWGA010000053         1540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_5131, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000053 DASWGA010000000
VERSION     DASWGA010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5131"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="VF991_01070"
     CDS             complement(<1..256)
                     /locus_tag="VF991_01070"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HEX9555052.1"
                     /translation="MTTGKPRVLATRHFPPDVEARLAMNFDAVLNPDDRLHDGASLTK
                     AAAGCDAIMCAAGDPLNAETIAGLPASIRMIATFSVGYEHV"
     gene            370..1230
                     /locus_tag="VF991_01075"
     CDS             370..1230
                     /locus_tag="VF991_01075"
                     /inference="COORDINATES: protein motif:HMM:NF020478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity EipB family protein"
                     /protein_id="HEX9555053.1"
                     /translation="MIKLRFRRPRVQIAASLAAVCAILLLALWIRVADAQQQQDVVLV
                     PHRATYDMKLSVARPNSGIVEVSGRMVLETVDSCDGWEVKQRIKLKFLRNDGEEFDTD
                     SSFSSYETKDGLGLRFSVRNIQNDEVEEELRGQADLDGQGGKGKASFTLPEARSFELP
                     AGTLFPTTHLALIIRHARDGDKSATYSVFDGARLDGAFQVNAVIGRSPRAANPPVRGD
                     VALLRGQPSWSVRLAFFAAGDQAGANPEYELALDLLANGVARSMLLDYGDFAVDARLV
                     QLQALPRPRC"
     gene            1224..>1540
                     /locus_tag="VF991_01080"
     CDS             1224..>1540
                     /locus_tag="VF991_01080"
                     /inference="COORDINATES: protein motif:HMM:NF020478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1849 family protein"
                     /protein_id="HEX9555054.1"
                     /translation="MLTVRRLTPALLVAVLAAAGSAAAQELSPHRAVYSVITLDHGKP
                     NGDAPGTYAYELRLTCDGYVVNQRLRLEVAGPRGAVANEQQSQMTESRDGKKLRFEHR
                     ATAG"
BASE COUNT          245 a          533 c          510 g          252 t
ORIGIN      
        1 cgacatgctc gtagcccacc gagaaggtgg cgatcatgcg gatcgaggcg ggcaggccgg
       61 cgatggtctc ggcgttcagg gggtcgcccg cggcgcacat gatggcatcg cagccggcgg
      121 cagccttggt caggctcgcc ccgtcatgga gacggtcgtc ggggttgagc accgcgtcga
      181 aattcatcgc cagccgggcc tcgacgtcgg gcggaaaatg ccgggtcgcc agcaccctgg
      241 gtttgccggt tgtcataaaa ggtatcctcc ctgtgcagcc ctgccgcagg cgatcattat
      301 ggtatttcgc gggcatggat attacgcttg gccgcccggc tacaaggcct tgccccctgc
      361 cattgtccgt tgatcaagct taggtttcgc cgtcctcgcg tccagatcgc ggcctcgctc
      421 gccgccgtct gcgccatatt gttgctggcc ttgtggataa gggtcgcaga cgcccagcag
      481 cagcaggacg tcgtcctggt gccgcatcgc gccacctacg atatgaagct ctccgtggcg
      541 cggcccaaca gcggcatcgt cgaggtgagc ggacgcatgg tgctggagac cgtggactcc
      601 tgcgacggct gggaggtcaa gcagcgcatc aagctcaagt tcttgcgcaa cgacggcgag
      661 gaattcgaca ctgattcgag cttttccagc tacgaaacca aggatgggct gggcctgcgc
      721 ttcagcgtgc gcaacatcca gaacgacgag gtcgaggagg aactgcgcgg ccaggccgac
      781 ctcgacgggc aaggcggcaa gggcaaggcc tcgttcaccc tgccggaggc gcgcagcttc
      841 gagctgccgg cgggcacgct gttcccgacc acccacttgg cgctgatcat ccggcacgcc
      901 cgcgacggcg acaaatcggc gacctacagc gtgttcgacg gggcgcggct cgacggcgcc
      961 ttccaggtca atgccgtgat cggccgctcg ccgcgcgccg ccaacccgcc ggtgcgcggc
     1021 gatgtcgcct tgctgcgcgg ccagccctcg tggagcgtac ggctggcctt cttcgccgct
     1081 ggcgaccagg ctggcgccaa ccccgaatac gagctcgccc tcgacctcct ggccaacggc
     1141 gtcgcccgct cgatgctgct cgactacggc gacttcgccg tggatgctcg tctcgtccaa
     1201 ctccaagccc tgccgaggcc gcgatgctga ctgtccgccg cttgacgccc gccctgcttg
     1261 tcgccgttct cgctgcggcg gggtccgccg cggcgcagga gctcagcccc catcgcgccg
     1321 tctactcggt catcaccctc gaccacggca agcccaacgg cgatgcgccg ggaacctatg
     1381 cctacgagct caggctgacc tgcgacggct acgtcgtgaa ccagcggctg cggctcgagg
     1441 tcgccggtcc gcgcggcgcg gtcgccaacg agcagcagtc gcagatgacg gaaagccgcg
     1501 acggcaagaa gctgcgcttc gagcaccgcg cgacggcggg
//
LOCUS       DASWGA010000054         3368 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2155305, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000054 DASWGA010000000
VERSION     DASWGA010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3368
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2155305"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..750
                     /locus_tag="VF991_01085"
     CDS             <1..750
                     /locus_tag="VF991_01085"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9555055.1"
                     /translation="ANETVANSSPDGRTVGLAAMAAMCVAPVMPGQKLPINVDTDLVP
                     IASIVSVYNMLVFGKHVQFRSVAELIEQAKKNPGKLSYASAGNGTSQHLAGELFKKMA
                     GVNLLHVPYRGGAPAIQDMVAGNCDVMFGNMPEFLGQLGGGGLIPIAFGSPHPSPLFP
                     NLPLISQVLPGFEVVNWFAAFGSKGLPADLVGVWNKALRTAVAKPDVQKRFVENGMDT
                     VIGSPEELKATIVADRKKWAAVIQEAGIRAD"
     gene            841..1650
                     /locus_tag="VF991_01090"
     CDS             841..1650
                     /locus_tag="VF991_01090"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9555056.1"
                     /translation="MPFAQTNHGTLHYDVVDQVAPWRGRQEAILFHHGIGASAGIWLD
                     WLPSLADGYRFVTFDMRGCGGSHIPAADFAWSLDLLIDDLFAVADAAGLKRFHLVGES
                     IGGTVALAAALARPERIATLTVSNGAHLGASIQRVEIWKRQLEGDGVKAWSDAMLSDR
                     FHDDALLPERRAWFANQQEQWPRDSILNALRVLIGTDLTPRLKDIRCPVLLLHPDGSP
                     FIPVPVMAELHRLLPGSELNVIGRSRHGLPFSHAKQCASLLRTFLDTRTAA"
     gene            1704..3071
                     /locus_tag="VF991_01095"
     CDS             1704..3071
                     /locus_tag="VF991_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555057.1"
                     /translation="MRRVLAGAAALAIALSAAPSFAQEKLTVWWVKGFYKSEDDALYA
                     AIKKYETKTGVKVELSQYAVQDMISKSVAALDAGTPPDIAYSDTYDVQVAGKWAFDGK
                     LEDISDVIEPMKARFSPNTVETTFLYSDKAKKKAYYAFPIKQQTLHIQYWKDMLGQAG
                     FKENDIPGTWKEYWSFWCDKVQPGIRKATGQRIYGIGSPMGVESTDSFQSFLSWVDAY
                     NVKLVDDSGKVLVDDPKVKAGLVNALKDYTDVYVKGCTPPSSTTWKDPDNNVAFHNRT
                     IVMTHNYTISIAAKWLDDANNEQLTAEQRAAGRKAYDELIATSGFPKKPDGSPMVYRA
                     AVKVGVIFQDSKNKKRAREFLTFLMEEDNLRPYVEGALGRWFPVTKESQKSPFWQADR
                     HRKAVYDQFMAGTLPFEFTKNYNFTILNNENVWAKAMNRVVNEKVPVDKAVDELIARI
                     KQVAG"
     gene            3163..>3368
                     /locus_tag="VF991_01100"
     CDS             3163..>3368
                     /locus_tag="VF991_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9555058.1"
                     /translation="MSEKQVWGLLFTAPYIAIFLGFVVFPVGYAFWLARSPHLYVELS
                     EDPIFLRTVVNTLVFLIVAINVKMV"
BASE COUNT          636 a         1088 c         1049 g          595 t
ORIGIN      
        1 gccaacgaga ccgtggccaa ctcaagcccc gacggccgca ccgtgggatt ggcggcgatg
       61 gctgcaatgt gtgtcgcgcc ggtaatgccg gggcaaaagc tgccaatcaa tgtcgacacc
      121 gacctcgtgc cgatcgccag catcgtcagc gtctacaata tgctggtgtt cggcaagcat
      181 gtgcagttcc gcagcgtggc cgagctgatc gagcaggcaa agaagaaccc gggcaagctc
      241 tcctatgcct cggctggcaa cggcacttcg cagcatctcg cgggcgagct gttcaagaag
      301 atggccggcg tcaatctcct gcacgtaccc tatcgcggcg gcgcgccggc cattcaggac
      361 atggtcgccg gcaattgcga cgtgatgttc ggcaacatgc cggagttcct gggccagctc
      421 ggcggtggcg gcctgatccc catcgccttc ggctcgccgc atccttcgcc gctctttccc
      481 aacctgccgt tgatctcgca ggtcctgccg ggcttcgagg tggtgaactg gttcgccgcg
      541 ttcggctcca agggcctgcc ggccgacttg gtcggtgtgt ggaacaaggc cctgcgcact
      601 gccgtcgcca agcccgatgt gcagaagcgc tttgtcgaga acggcatgga tacggtgatc
      661 ggctcgccgg aggagttgaa agccaccatt gtcgccgacc gcaagaagtg ggcggcggtc
      721 atccaggaag ccggcatccg cgcggattaa gctgggggcg cgcgactcca gtcgcgcgtc
      781 tttgctagat cacgaagatc gcgccactgg agtggcgcgc ccccagcgaa gagtaacgac
      841 atgccgttcg cccaaaccaa tcacggcacc ctgcactacg acgtcgtcga tcaggtcgcg
      901 ccgtggcgcg ggcggcaaga ggcgatcctg tttcatcacg gaatcggcgc cagtgccggg
      961 atctggttgg actggttgcc gtcgctcgcc gacggctacc gcttcgtcac cttcgacatg
     1021 cgcgggtgcg gtggttcgca cattcccgcg gccgacttcg cctggtcgct cgatctgctg
     1081 atcgacgatc tgttcgccgt ggccgatgcc gcgggactga agcgcttcca tctcgtcggc
     1141 gagtcgatcg gcggcaccgt cgccctcgcc gcggcgctgg cacggcccga gcgcatcgcc
     1201 acgctcaccg tcagcaatgg cgcccatctt ggcgcctcga tccaacgggt tgagatctgg
     1261 aagcgtcagc tcgaggggga cggcgtgaag gcctggtccg atgccatgct gagcgaccgc
     1321 ttccacgacg atgcattgtt gccggagcgg cgggcgtggt tcgccaacca gcaggagcag
     1381 tggccgcgtg actccatcct caatgcattg cgggtgctga taggcaccga tctcacgccg
     1441 cggctgaagg acataaggtg tccggtcctg ctgctgcatc ccgacggcag cccgttcatc
     1501 ccggtgccgg tcatggccga gttgcaccgc ctgctgcccg gatcggaact caatgtgatc
     1561 ggccgttcac gtcacggcct gcctttttcg cacgccaagc agtgtgcttc gctgttgcga
     1621 acttttctcg acacccgtac ggctgcctga tatccgttcg cccctacgtc ccggggagga
     1681 cggcaacaac gcaagaggca acgatgagac gcgtattggc tggcgccgcc gcactggcga
     1741 ttgccctgag tgctgctccc agcttcgccc aggaaaagct caccgtatgg tgggtcaaag
     1801 gcttctacaa atccgaggac gacgcgcttt acgcggcgat caagaagtac gagaccaaga
     1861 ccggcgtgaa ggtcgagctc tcgcagtacg ccgtgcagga catgatctcg aagtcggtgg
     1921 ccgcgctcga cgccggcacg ccgcccgaca tcgcctattc cgacacctac gacgttcagg
     1981 tcgccggcaa gtgggcgttc gacggcaagc tcgaggacat ctccgacgtc atcgagccga
     2041 tgaaggcgcg cttctcgcct aatacggtgg agacgacctt cctctatagc gacaaggcca
     2101 agaagaaggc ctactacgcc ttcccgatca agcagcagac cctgcacatc cagtactgga
     2161 aggacatgct gggccaggcc ggcttcaagg aaaacgacat tcccggcacc tggaaggaat
     2221 actggtcgtt ctggtgcgac aaggtccagc cgggcatccg caaggccacc ggccagcgca
     2281 tctacggcat cggcagcccg atgggcgtcg aatcgaccga ttcgttccag tccttcctga
     2341 gctgggtcga cgcctacaac gtcaagctgg tcgacgattc gggcaaggtt ttggtcgacg
     2401 atcccaaggt caaggcgggc ctggtcaacg cgctcaagga ctacaccgac gtctatgtga
     2461 agggctgcac gccgccctcg tcgacgacct ggaaggatcc cgacaacaac gtcgccttcc
     2521 acaaccgcac gatcgtgatg acgcacaact acacgatctc gatcgcggcc aagtggctcg
     2581 acgacgccaa caacgagcag ctcaccgccg agcagcgcgc cgccggccgc aaggcctacg
     2641 acgagctgat cgccacctcg ggctttccca agaagccgga cggctcgccg atggtctatc
     2701 gcgccgcggt caaggtcggc gtgatcttcc aggactccaa gaacaagaag cgcgcgcgcg
     2761 agttcctgac cttcctgatg gaggaggaca acctccgccc ctacgtcgaa ggcgcgctcg
     2821 gccgctggtt cccggtgacc aaggagagtc agaagagccc gttctggcag gccgacaggc
     2881 atcgcaaggc ggtgtatgac cagttcatgg cgggcacttt gccgttcgag ttcaccaaga
     2941 actacaactt caccatcctg aacaacgaga acgtctgggc caaggcgatg aaccgggtgg
     3001 tcaacgagaa ggtgccggtc gacaaggcgg tcgacgagct gatcgcccgc atcaagcagg
     3061 tggccggctg atcctgccgg tcgcgggtaa agcgtagtga cagcaacagc aacagcgatc
     3121 gatcaagcgg cccgtcggca accccggcgg gccggcgttg cgttgtcgga gaagcaggtc
     3181 tggggcctgc tgttcacggc gccctatatc gcgatcttcc tgggcttcgt ggtctttccc
     3241 gtcggctacg ccttctggct ggcacgcagc ccgcatctct acgtcgaact gtccgaagac
     3301 cccatcttcc tgcgcacggt ggtgaacacg ctggtgttcc tgatcgtggc gatcaacgtc
     3361 aaaatggt
//
LOCUS       DASWGA010000055         2492 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1145441, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000055 DASWGA010000000
VERSION     DASWGA010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1145441"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1401
                     /gene="metG"
                     /locus_tag="VF991_01105"
     CDS             <1..1401
                     /gene="metG"
                     /locus_tag="VF991_01105"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEX9555059.1"
                     /translation="SFDHFSRTSGEANRLLTQDIFRRLDAAGHIEARTIRQAYSPTDR
                     RFLPDRYVAGTCPHCGDANARGDQCENCTRVLDPADLLAPRSAISGATDVEFRETRHL
                     FLKLSSFEPALRRWLEAQRHWPLLVRSIALKWLDEGLRDRCITRDLSWGVPVPKPGFE
                     DKVFYVWFDAPIGYIAAAIEWADAAPGRDWRAWWQGGGDVQYVQFLAKDNVPFHTVSF
                     PATILGSGLPIKLPDIIKGFNWLTFEGGKFSTSRQRGIFTDTALALLPADVWRWWLTA
                     NAPEGDDSDFTVPRFVESVNKDLADTFGNLVNRCLAFAASAFGPTVPTGGTIGPAERE
                     LARKLGAALAQLRDHHEALNIRKAANEVRAIWKIANAYLAETAPWSVVKYDRERAAAI
                     TRTGINLVRVAALAAWPFIPGAAAAVLRSLGEETDPASWVEDGELAISAVAGGRPFCV
                     PPLLFRKIAAADLSST"
     gene            complement(1404..2240)
                     /locus_tag="VF991_01110"
     CDS             complement(1404..2240)
                     /locus_tag="VF991_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9555060.1"
                     /translation="MRNYRHIEVRPIAGALGAELHGVDIARELEDDVVGEVRQALLDH
                     LVIFLRDQKATPHQQLAFAKRFGEPIEYPQLKGLPESPMITPVVKLEHERNNFGGIWH
                     SDTTYLAQPPMGSMLLAREVPPYGGDTMFANQYLAYEALSDGLKATLDGLVGVSSSIK
                     ADVTKTREDRLKAAGAEHKVLTAEHPIVRTHPETGRKALYTSRAHTAHIRGWTEKESL
                     PLLEFLWEHQTRPEFTCRFRWDVGSLAFWDNRCAMHNPINDYHGYRRVMHRITLAGDK
                     PQ"
     gene            complement(2243..>2492)
                     /locus_tag="VF991_01115"
     CDS             complement(2243..>2492)
                     /locus_tag="VF991_01115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555061.1"
                     /translation="RHLCATTAEINRTLKAVLDDVLRLEPQALATVKRLVLGCATEDD
                     RAVLDDAAESLVGLLRRPQASEGIRHFMAKTPPPWAKE"
BASE COUNT          401 a          830 c          785 g          476 t
ORIGIN      
        1 tccttcgacc atttctcgcg gacctcggga gaggccaatc ggcttctgac ccaggacatc
       61 ttccgccgcc tcgatgccgc cggtcacatc gaagcgcgca ccatcagaca ggcctattcg
      121 cccaccgacc ggcgcttcct gcccgaccgt tatgtcgccg gcacctgtcc tcattgcggc
      181 gacgccaatg cgcgcggcga tcagtgcgaa aactgcacgc gcgtgctcga cccggcagac
      241 ctcttggcgc cgcgctcggc gatctccggc gccaccgatg tcgaattccg cgaaacgcga
      301 catctgttcc tgaaactttc ctccttcgag ccggctcttc gacgatggct ggaggcgcaa
      361 cggcactggc ctctgctggt ccggtcgatc gccctgaaat ggctcgacga gggtcttcgc
      421 gatcgttgca tcacccgcga cctttcctgg ggtgtgccgg tccccaagcc cggtttcgag
      481 gacaaggtgt tctatgtctg gttcgacgcg ccgatcggct acatcgcggc ggcgatcgaa
      541 tgggccgacg cggcgccggg acgcgattgg cgcgcttggt ggcagggcgg cggcgacgtg
      601 cagtacgtgc aattcctcgc caaggacaat gtgccttttc acaccgtctc gttcccggcc
      661 acgatcctgg gctcgggtct gccaatcaag ctgccggaca tcatcaaggg gtttaactgg
      721 ctcactttcg aaggcggcaa gttctccacc agccgacagc gcggcatctt caccgacacc
      781 gccctcgccc tgctccccgc cgacgtttgg cgatggtggc tcaccgccaa tgcgcccgag
      841 ggagacgatt cggatttcac tgtgccgcgc ttcgttgaaa gcgtgaacaa agacctggct
      901 gatacattcg gtaacctggt caatcgctgc ctcgccttcg ctgcttccgc tttcggcccg
      961 acggtcccga ctggcggcac tattggaccg gccgagcgcg agctcgcccg caagctcggc
     1021 gcggcgctgg cccaactgcg cgaccatcac gaggcgctga acatccgcaa ggctgcgaac
     1081 gaagtccgcg cgatctggaa gatcgcgaac gcctatcttg ccgaaacggc gccgtggtcc
     1141 gtcgtcaaat acgatcggga aagggcagcc gcgatcacca gaaccggcat caacctggtg
     1201 cgggtcgccg ccttggcagc gtggccgttc attcccgggg cggccgccgc cgtcctgcgc
     1261 agtctcggcg aagagaccga tcctgcgtca tgggtggagg acggtgagtt ggcgatctcg
     1321 gccgtcgccg gcggacgccc gttctgcgtt ccgccgctct tatttcgcaa gatcgccgct
     1381 gcagatctct catccacgtg acgtcattgc ggcttgtcgc ccgccaaagt gatccggtgc
     1441 atgacccggc ggtagccgtg atagtcgttg atcggattgt gcatggcgca gcggttgtcc
     1501 cagaaggcga gcgaacccac gtcccagcgg aagcgacagg tgaattcggg ccgcgtctgg
     1561 tgctcccaca ggaactccag cagcggcaag ctctccttct ccgtccagcc cctgatatgc
     1621 gcagtgtggg ccctggaggt gtaaagcgcc ttgcggccgg tctcgggatg agtgcgcacg
     1681 atcggatgct cggcggtcag taccttgtgc tccgcgccgg ccgcctttag gcggtcctcg
     1741 cgtgtcttgg tgacgtcggc cttgattgag gagctcacac ccaccagccc gtcgagcgtc
     1801 gctttcagcc cgtccgacag cgcctcgtag gcgagatact ggttggcgaa catcgtgtcg
     1861 ccgccatagg gcggcacctc gcgcgccagc agcatgctgc ccatcggcgg ttgggcgaga
     1921 taggtcgtgt cggaatgcca gatgccgcca aaattgttgc gctcgtgttc gagcttgacg
     1981 acgggcgtga tcatgggcga ttcgggcaag cctttgagct gcggatattc gatcggctca
     2041 ccgaaccttt tggcaaaggc gagctgctgg tgcggtgtcg ccttctggtc gcgcaggaag
     2101 atcacgagat ggtcgagcaa ggcctggcgc acttcgccga cgacgtcgtc ctcgagctcg
     2161 cgcgcgatgt cgacgccatg aagctcggcg cccagcgcgc cggcaatcgg cctgacctcg
     2221 atatggcgat agttgcgcat ccctattcct ttgcccacgg cggcggcgtc tttgccatga
     2281 aatgccggat gccttccgac gcctgcggcc ggcgcagcag gccgaccagg ctttcggctg
     2341 catcgtccaa tacggcgcga tcatcctccg tggcacagcc cagcaccaga cgtttgacgg
     2401 tcgccagcgc ctgcggctcg agccgcagca catcgtccag cacggccttc agggtccggt
     2461 tgatctcggc cgtggtggcg cagagatggc gg
//
LOCUS       DASWGA010000056         5701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2031309, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000056 DASWGA010000000
VERSION     DASWGA010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5701
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2031309"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2172
                     /locus_tag="VF991_01120"
     CDS             <1..2172
                     /locus_tag="VF991_01120"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX9555062.1"
                     /translation="VRQLVDQARRIEQGGMSTTTLEKIGGLLASLASRADLFPQDEFP
                     LGADGGIYRLSEDPDHRFALYASAGGAGKKVPPHNHTTWAIIAGVHGAERNVVYERLD
                     SGAREDVVRLREAPAKEKTLRRGDVICYLPDDFHHIETPAGSGDALHLHFYGLSLEHL
                     PNRMSVDMATGTAKRFMAKAKILTPLLSVQQVKAMLKAGEVFAFFDVREEGEFSTEGH
                     PLFATPLPLSRLEPRAFALLPDPHTRIVLMDSGEEGRDPQWSGRANRAAAKLSQLGYT
                     DLAVMKDGLKAWREAGYEVFTGVNVPSKAFGEVVEHENDTPRIDAADLQKLVDAKTDL
                     VILDSRPMPEFNNMSIPGGIDCPGAELVYRVKDLAPRPETLVVVNCAGRTRSIIGAQS
                     LINAGLPNKVIALKNGTMGWHLAGLKVARGETTSFGPQGPQAAKFAQAAAANIAAKMK
                     VKKIDKAGLARLEAKGGPLYRLDVRDPAEYAQGHLKGFRHAAGGQLVQATDQYVGARG
                     ATIVLHDNDGVRATMTAHWLMQMAWNEVYVLDHKPVSTELTTEAEPRFPKGFLPPTPA
                     SVAAAELHKSLERALVIDLDTSLRYRDGHVPGAWFAVRANLAKTIPEMLAKQNAVTRI
                     VLVSPDGEIAALAAPEAEAAAGGLPVVILEGGMTGWRDAKLGIETGHTRMADPPTDVW
                     YRPYDFKENIEAAMRQYLDWEVDLVPQVTRDGDAKFAVFKR"
     gene            2186..2551
                     /locus_tag="VF991_01125"
     CDS             2186..2551
                     /locus_tag="VF991_01125"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEX9555063.1"
                     /translation="MDNRDSDGDRRRIEEIDARLKAARAANPKPRQNEAPSNLMSQRQ
                     TGVAYRVLVDMIAGLLVGGFLGYWLDRWLGWTPYSLVTGLVVGFVAGVNNAWRAIRAY
                     SKDAAVMGDGGDDGNRRLP"
     gene            2595..3323
                     /locus_tag="VF991_01130"
     CDS             2595..3323
                     /locus_tag="VF991_01130"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEX9555064.1"
                     /translation="MHSPMEQFEIKRLFHLNLFGIDASFTNSSTWMIIAVILATAVFV
                     WGMRQRALVPGRLQSVAELGYEFIAGMVRDNVGDGGKKYFPFILTLFIFILFCNVLGL
                     VPYSFTPTSHIIVTFAMAAFVFVGVTLIGFARHGVHFLSLFVPKGVPFVLLLLLVPIE
                     IISYFIRPFSLSIRLFANMLAGHTMLKVFGGFVVMLGIIGGWAPLAFIVVFTGLELLI
                     AFLQAYVFAILTCLYLNDAIHLQH"
     gene            3349..3576
                     /locus_tag="VF991_01135"
     CDS             3349..3576
                     /locus_tag="VF991_01135"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEX9555065.1"
                     /translation="MDASAAKLIGAGLATIALAGVGVGIGNIFGSFVSGALRNPEAAP
                     RVFGNVLLGFALTEAVALFALVIAFMILFVF"
     gene            3581..4165
                     /locus_tag="VF991_01140"
     CDS             3581..4165
                     /locus_tag="VF991_01140"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HEX9555066.1"
                     /translation="MRRAVSGAFAAGLAVLLASGAVLAKEGSGGMPQLDVHSFAPQLV
                     WLAITFVALYLVMSRLAVPAISDTLDKRQAKIQGDLDAAEKANEEARSLIAAYQRRLA
                     DTREEARKLMRERGEVDNAAAAARLQALHDKLAAQIADAEKRIAAQRDEVMEGLEQMA
                     KDIGQEVYAKLAGQPADQGALAAKVAAAAKGGGR"
     gene            4162..4695
                     /locus_tag="VF991_01145"
     CDS             4162..4695
                     /locus_tag="VF991_01145"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555067.1"
                     /translation="MIGTAWAADAASGHEGGFFAQPELWVGVAFVLFFALVGKVLWTR
                     LSDMLDKRAAAIAKALADAERLREEALKAKLEAERTLAQATTEGGAILQHAQEEAQRM
                     QARAAANLQTAVALREQQALDRIAQSETAAAKHVRDTAVDVALAATRSLLREQVGSGR
                     SGALIEEAIAELPRRLH"
     gene            complement(4886..>5701)
                     /locus_tag="VF991_01150"
     CDS             complement(4886..>5701)
                     /locus_tag="VF991_01150"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03617 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX9555068.1"
                     /translation="SYGGERVTLGLGSQVRAHNERRFSVPWTAPAPRIREYVQAVRAI
                     WAAWKGDGKLNYEGKHYRFTLMTPNFVPEPYDGPLPRIAVAAVGPVMLKVAAEESDDV
                     KLHSFCTRKYLEQNIMPIVTAGLATAGRARETFEISGGGFVVTGKDDEAVTRLFDWVR
                     YRVAFYGSTPAYWPVFELHGLGDLGRKLNAMTRAGQWNDMAKEVSDDVVHLFAAVGRH
                     DQIAKAIAERFGGLVDSIGASANSSKPSDLPPDLLQDLAKIPTPFRHPDRSRA"
BASE COUNT          962 a         1892 c         1888 g          959 t
ORIGIN      
        1 gtgcggcagt tggtcgatca ggcgcgacgc atcgagcagg gcggcatgag caccaccact
       61 ctggaaaaga tcggcgggct tctggcttcg ctggccagcc gtgccgatct tttcccgcag
      121 gatgagttcc cgctcggcgc cgatggcggc atctatcggc tgagcgagga cccggaccac
      181 cgcttcgcgc tctacgcctc ggcgggcggc gccggcaaga aggtgccgcc gcacaatcac
      241 acgacctggg cgatcatcgc cggcgtccat ggggcggagc gcaacgtggt ctacgagcgc
      301 ctcgacagcg gtgcgcgcga ggacgtcgtc cggttgcgcg aggccccggc caaggaaaag
      361 acgctgcgcc gcggcgacgt catctgctat ttgcccgacg attttcacca tatcgagacg
      421 ccggccggtt cgggcgacgc gctgcacctt cacttctatg gcttgagcct ggaacatctg
      481 cccaaccgca tgtcggtcga catggcgacc ggcacggcca agcgcttcat ggccaaggcg
      541 aagatcctga cgccgctgct gtcggtccag caggtcaagg cgatgctgaa ggcaggcgag
      601 gtgttcgcct tcttcgacgt gcgcgaggaa ggcgagttct cgaccgaggg ccatccattg
      661 ttcgccacgc ccctgccgct gtcgcgcctg gagccgcgag cgttcgccct gctgcccgat
      721 ccgcatacgc gcatcgtgtt gatggacagc ggcgaggagg gtcgcgatcc gcaatggagt
      781 ggccgcgcca accgcgccgc cgccaagctc tcccagctcg gctacaccga ccttgccgtc
      841 atgaaggatg gcctgaaagc ctggcgcgag gcgggctacg aggtcttcac cggggtcaat
      901 gtgccgagca aggcgttcgg cgaagtggtc gagcatgaga acgacacgcc gcgcatcgac
      961 gccgccgacc tgcaaaagct tgtggacgcc aagaccgacc tggtgatcct cgattcccgg
     1021 ccgatgcccg agttcaacaa catgtcgatc cccggcggca tcgactgtcc cggcgccgag
     1081 ctggtctatc gggtgaaaga cctggcgccc aggcccgaga ccctggtggt ggtgaactgt
     1141 gccgggcgca cgcgctcgat catcggcgcg cagtcgctga tcaatgccgg cctgcccaac
     1201 aaagtgatcg cgctcaagaa cggcaccatg ggctggcacc tcgccggcct gaaggtggcg
     1261 cgcggcgaga ccacaagctt cggcccgcag ggaccgcaag cggccaagtt cgcgcaagcg
     1321 gctgcggcga acatcgccgc caagatgaag gtgaagaaga tcgacaaagc agggcttgcc
     1381 cggctcgagg ctaaaggcgg gccgctctac cggctcgatg tacgcgatcc cgccgagtat
     1441 gcgcagggtc acctaaaagg cttccgccat gccgcgggcg gtcagctcgt ccaggcgacc
     1501 gaccagtatg tcggcgcacg cggcgccacc atcgtgctgc acgacaacga cggcgtgcgc
     1561 gccaccatga cggcgcactg gctgatgcag atggcctgga acgaggtcta cgtgctcgac
     1621 cacaagccgg tctcgaccga gctcaccacc gaggccgaac cgcgtttccc caagggcttc
     1681 ctgccgccga cgcctgcgtc ggtggcggcg gccgaactgc acaaatcgtt ggagcgcgcc
     1741 ctggtgatcg atctcgacac cagcctgcgc taccgcgacg gtcacgtccc gggcgcctgg
     1801 ttcgccgtgc gcgccaacct tgccaagacc atccccgaga tgctggccaa gcagaacgcc
     1861 gtcacgcgga tcgtcctggt ctcgcccgat ggcgagatcg cagcgcttgc tgcgccggag
     1921 gccgaagcag ccgccggcgg cttgccggtc gtgatcctgg agggcggcat gacgggctgg
     1981 cgcgacgcca agctcggcat cgagaccggc cacacgcgga tggccgatcc gccgaccgac
     2041 gtctggtatc ggccttatga cttcaaagag aatatcgagg cggcgatgcg ccagtatctc
     2101 gactgggagg tcgacctggt gccgcaggtg acgcgcgacg gcgacgccaa gttcgcggtc
     2161 ttcaaacgct aagcagttga tccaaatgga taatcgcgac tccgacggcg accgacgacg
     2221 catcgaggag atcgatgcga ggctgaaggc cgcgcgcgcg gccaatccaa aaccgcgcca
     2281 gaacgaggcc ccgagcaacc taatgtcgca gcgccagaca ggcgttgcct atcgcgtttt
     2341 ggtggatatg atcgcgggcc ttttggtcgg ggggttcctc ggctattggc tcgaccgctg
     2401 gttgggttgg acgccgtatt ctttggtgac aggcctcgtc gtgggcttcg tcgccggcgt
     2461 caacaatgcc tggcgcgcca ttcgagcgta ctcgaaggat gcggcagtca tgggcgatgg
     2521 gggcgacgac gggaatcgtc gcctgccctg aggcggttta ggcgttggat cgaagtgggg
     2581 acgaggtaag ccaaatgcac agcccgatgg agcagttcga gatcaagcga ctgttccacc
     2641 tgaatctctt tggcatcgac gcctctttca cgaattcatc gacctggatg atcatcgccg
     2701 tgatcctggc gaccgcggtg ttcgtgtggg gcatgcgcca gcgcgccctg gtgccgggcc
     2761 gcctgcagtc ggtcgccgag ctgggctacg agttcatcgc cggcatggtg cgcgacaatg
     2821 tcggggacgg cggcaagaag tacttcccgt tcatcctgac gctcttcatc ttcatcctgt
     2881 tctgcaacgt gctgggcctg gtgccctact cgttcacgcc gaccagccac atcatcgtca
     2941 ccttcgccat ggcggccttc gtgttcgtcg gcgtcaccct gatcggcttc gcccgccacg
     3001 gcgtgcattt cctgtcgctc tttgtcccga agggcgtgcc gttcgtgctc ctgctgctgc
     3061 tggtgccgat cgagatcatc tcctacttca tccgcccgtt cagcctgtcg atccggctgt
     3121 ttgccaacat gctggccggc cacaccatgc tgaaggtgtt cggcggcttc gtcgtcatgc
     3181 tgggcatcat cggcggctgg gcgccgcttg ccttcatcgt cgtgttcacc ggcctcgaac
     3241 tgctgatcgc gttcctgcag gcctacgtgt tcgcaatcct gacctgtctg tatctgaacg
     3301 acgccattca tctccaacac tgacatcact tacggaagga acatccaaat ggacgcctct
     3361 gcagccaagc tcatcggtgc cggtctcgcc accatcgccc tcgccggcgt cggcgtcggc
     3421 atcggcaaca tcttcggcag cttcgtctcc ggcgcgctgc gcaacccgga agcggccccc
     3481 cgcgtgttcg gcaacgtgct gctgggcttc gcgctcaccg aagccgtggc gctgttcgcg
     3541 ctggtcatcg ccttcatgat cctgttcgtg ttctaggcac gtgcgtagag cggtctccgg
     3601 tgcgttcgcc gccggcctcg ccgtgttgtt ggcgagcggc gcggtcctgg cgaaggaagg
     3661 gtcgggcggc atgccgcagc tcgacgtcca cagcttcgca ccgcagctcg tctggctcgc
     3721 gatcaccttc gtggccctct atctggtgat gtcgaggctc gcggtgcccg cgatctccga
     3781 cacgctggac aagcgtcagg ccaagatcca gggcgatctc gacgcggcgg agaaggccaa
     3841 cgaggaggct cgcagcctga tcgcggcgta ccagagacgc ctggccgaca cccgcgagga
     3901 agcccgcaag ctgatgcgcg agcgcggcga ggtcgataac gccgcggcgg cggcacggct
     3961 ccaggcgctg cacgacaagc tggcggcgca gatcgccgac gccgagaagc gcatcgccgc
     4021 ccagcgcgac gaggtcatgg aaggtctcga gcagatggcc aaggacatcg gccaggaagt
     4081 ctatgccaag ctcgccggcc agccggccga ccagggcgcg ctcgcggcca aggtcgcggc
     4141 ggcagccaag ggaggcggcc gatgattggt acggcatggg cggcggacgc cgcgagcggt
     4201 cacgaaggcg gcttcttcgc ccagccggaa ctttgggtcg gcgtcgcgtt cgtgctgttc
     4261 ttcgccctgg tgggcaaagt cttatggacc cgcctttccg acatgctcga caagcgcgcg
     4321 gcggcgatcg ccaaggcgct ggccgatgcc gagcgcctgc gcgaggaggc gctcaaggcc
     4381 aagctggagg ccgagcgcac gctcgcccag gcgacgaccg aaggcggcgc catcctgcag
     4441 cacgcgcagg aggaggccca gcgcatgcag gcgagggctg cggccaacct gcaaaccgcg
     4501 gtggcgctgc gcgaacagca ggcgcttgac cggattgccc aatccgagac cgccgccgcc
     4561 aaacacgtgc gcgacacggc cgtcgacgtg gcgttggccg cgacccgatc gctgttgcgc
     4621 gagcaggtcg gttcgggccg cagcggcgcg ctgatcgaag aggcgatcgc cgaattgccg
     4681 cgccgcctgc actgatttcc gagagttcga aattgcccgc ataaaatcaa tcgcgggcta
     4741 cctggggccc tcgccgcaag gcgggggctt tttctttgtc gaccgtcatc ccgactcgcg
     4801 cggatcagat ccgcgcttga gcgaagcgga gtggagggac ctcgtcttcg tcgagcatat
     4861 gaagaggtcc ctccacttcg cctcgctacg ctcggcttcg gtcgggatga cggaagggtg
     4921 tcgggatctt cgcaagatcc tgcagcaaat ccggcggcag gtcggacggc ttggacgaat
     4981 tggcgctggc gccgatcgaa tcgaccaacc cgccgaaacg ctcggcgatc gccttggcga
     5041 tctggtcgtg ccggccgacc gcggcgaaca ggtgcaccac gtcgtccgag acttccttgg
     5101 ccatgtcgtt ccactggccg gcgcgcgtca tggcgttgag cttgcggccg agatcgccca
     5161 gcccatgcag ctcgaacacc ggccagtagg cgggcgtcga gccgtagaac gccacgcgat
     5221 agcgtaccca gtcgaacaac ctggtgaccg cctcgtcgtc cttgccagtg accacgaaac
     5281 cgccgcccga gatctcgaag gtctcgcgcg cccggcccgc ggtggccaga cccgcggtga
     5341 cgatgggcat tatgttctgc tccaggtact tgcgcgtgca gaacgagtgg agcttcacgt
     5401 cgtcggattc ctcggccgcc accttcagca tgacgggacc gacagcggcg acggcgatgc
     5461 gcggcagcgg accgtcatag ggctcgggca cgaagttggg cgtcatcagg gtgaagcgat
     5521 aatgcttgcc ctcgtaattg agcttgccgt cgcccttcca cgccgcccag atcgcccgca
     5581 cggcctgcac gtattcgcga atgcgcggcg cgggcgccgt ccacggcacg gagaagcgcc
     5641 gctcgttgtg cgcccggacc tgggagccca ggcccaaggt gacgcgctcg ccgccgtagc
     5701 t
//
LOCUS       DASWGA010000057        14610 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_386234, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000057 DASWGA010000000
VERSION     DASWGA010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 14610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14610
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386234"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2729
                     /locus_tag="VF991_01155"
     CDS             <1..2729
                     /locus_tag="VF991_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9555069.1"
                     /translation="VAIGETPDLAARLQAAAAPGEVVIAASTHRLVGRMFDCRALGPI
                     EVKGLPQPIGAWQVRGTAAGVSRFEARRSGALSPFVGRQEEIELLLRRWDRAKRGEGR
                     VVLLSGEPGIGKSRIAESLLVGLAGEPHACLRYFCSPHHAHSALHPFIAQLERAASFE
                     PGSDAGAKLDKLEALLRPTAKNAPRDVALIAELLGVPAQGRYPALAVSPQQKGEMTLT
                     ALLEHLDGVAAQGPVLIVFEDAHWIDPTSQDLLNRMVARVTNLPVLLVVTVRPELQPA
                     WVGEPHVTMLPLSRLGRRDSAGIIASVAKHKVLPDEVVQQVLAHTDGVPLFVEELTRT
                     LLEGGLLREATDSYVLDRPLSPLAVPTTLQDSLVARLDRLGPGKDVAMIGAAIGREFS
                     HELIAAVSALPPVGLDAALERLTGSGLVSRRGTPPYATYAFKHALVQDAAYATLLKSR
                     RRQLHLSIANALVERFPALTERLPEVVAQHFTKAGLASEAIGYWRKAGQLASARSANR
                     EAVMCFEQALTALGHLPETRETLEWAIDLRFDLKTALHPLGEFERIFSYLHGAEGLAR
                     ILDDQRRLGQLSVHLCHALWMTGQPTKALAFGQRGQAIAESLGDVPLQVMANLYLGAV
                     CMRTGDYRRAEKLLLNVLRLLEGELSRERFDLAEFPAVVARCYLTMILAIQGRFKEGL
                     AHGQEGMRLADKLDHPYSMCQLCWYLAYLQITRGELGDAVCTLERGQALAREWNLAYF
                     SLAHTAGLGYAHALSGRAAEGIPLLERAVSAAETMGYGAAQWAFLMYLGEAHLLADRI
                     EDAFELAGRALAYYREQGQRPYEASALRLLGDITARRDSPAQADGLYRDALALAEELG
                     MRPLVAHCHLGLGKLYRRTGTRKQAQKHVATAMTMYRDMGMTHWLEQAERAL"
     gene            complement(2726..4276)
                     /locus_tag="VF991_01160"
     CDS             complement(2726..4276)
                     /locus_tag="VF991_01160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555070.1"
                     /translation="MSTDPSSPDLPPDQFLYGRKGPWPQPSPSHPLKEAAEVLSVPLV
                     ESLVWDATVGKRLLIGLAALPPLAAKGAIFDGQSLIPNDDEFNGLMLNTLYTRFMKPK
                     LDADRRHLDRAPNAAKFWKYDFSAMKLVEPLAGMYCAPVVCVFGQDGAGIRQCVYIRF
                     RGETDAQDVFVFPGGGDAWSLAKIYALQACAYHMLFVVHPALHFPMDSVNAITKTAVP
                     HTHPLFQLLYPHTSYTLALDNTVLEGPNSVANNNAQATWFDPLMGNAYDLKLLFGAAY
                     TGLSDAWFGDAYPPYDYMKPQMGFDSPYGQWLAAYFPPFLTLCKAVAREIIKADKQDT
                     YVTRWARYTSTYVRGFPDEKTIAPGGILDEDCLAQAMAIFMWDVTVAHGGDHYSFGLN
                     IPSKFKFLRIRNYPPLPGPPPVGGPTKVGDVANGDDLYRAELAERLFFGPHAMAPNLN
                     ETYYAFTDSMLALPQLFFHNALTEVSQQYTYSLDKPFMPLDVTQAPEPPDPAYTQYEL
                     TIPASIQY"
     gene            complement(4540..4935)
                     /locus_tag="VF991_01165"
     CDS             complement(4540..4935)
                     /locus_tag="VF991_01165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555071.1"
                     /translation="MKMPIGAFLRLALAVVLIGLADGHAALAGPGARPNVTVEAVLPG
                     CRSLVATQGIPTSAEAGFCSGLIDGLLYLGEQLPPDFCYAVPVDAPRVRIAAAIVEEI
                     EAVYPSVKEHHFRALALEVLQYRWPCHYG"
     gene            complement(4932..5798)
                     /locus_tag="VF991_01170"
     CDS             complement(4932..5798)
                     /locus_tag="VF991_01170"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9555072.1"
                     /translation="MSLAALMHFRAVTAPRLRAPAYRSALATGSVLALAVCTIWLSAV
                     VPAERAPWVSLAILAASLVSSIAGFAFSAICGAMLFHLIDDPVRAVQIMMICSVGGQS
                     LMVWGLRRDIPWRALSVFLAGATAGLPLGIFVLLHTRPAVYAQVIGVALMLYAFFMMA
                     RRPMIVRRQNALFDLLAGFLGGVTGGAAAFPGAFVTIWCGFKGWPKEKQRALYQPFIL
                     IVQLAAIALMALPGFFPQSRPPFDFTGIVHLPAMLLGCTLGMACFKRLSDRQFSMAVN
                     LLLAVSGLSFLV"
     gene            complement(5795..5956)
                     /locus_tag="VF991_01175"
     CDS             complement(5795..5956)
                     /locus_tag="VF991_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555073.1"
                     /translation="MATILGGLAFAVFLIAQIAAVMAVNRVNNTRRPDAFDAIRRDRG
                     ARVIWDSAN"
     gene            complement(6199..6405)
                     /locus_tag="VF991_01180"
     CDS             complement(6199..6405)
                     /locus_tag="VF991_01180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555074.1"
                     /translation="MAQQFKLKFPTPGTVADDDRAWYFAAITGRILAATVVVLLVALV
                     LAAELRLTPEQRMDLLGATTYAAP"
     gene            complement(6428..6793)
                     /locus_tag="VF991_01185"
     CDS             complement(6428..6793)
                     /locus_tag="VF991_01185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555075.1"
                     /translation="MAASERRLDPRSSNLAIFAVSAAVAIAVGVLAYQPIPDVQSTDR
                     DVGIVEPAGVSLRCLEADRASVAQLAPLLERNSPADAPILERANHTLSIARRHCLYGW
                     DGRALEDYAWLTRWLSEHG"
     gene            complement(6909..7550)
                     /gene="radC"
                     /locus_tag="VF991_01190"
     CDS             complement(6909..7550)
                     /gene="radC"
                     /locus_tag="VF991_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEX9555076.1"
                     /translation="MRERVMRAGAELLEDYELLELLLFYSIERIDTKPLAKRLLDRFG
                     TLGDVFAAEPAQLREFDIDQRTLVLFKASREAGRRLAERKVKDMPVLTNWQQLIDYCH
                     TALAHEKTEQFRILFLDRKNVLIADEVQQRGTIDHTPVYPREVVKRALALNAAALILV
                     HNHPSGDPKPSRDDIEMTKEIAKAAEALGIAIHDHLVIGRKGHASFRSLGLLT"
     gene            complement(7932..8153)
                     /locus_tag="VF991_01195"
     CDS             complement(7932..8153)
                     /locus_tag="VF991_01195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555077.1"
                     /translation="MPGATKPPPTAGGERAFAFGPYRLLAAQRLLLEGDKPVRLGSRA
                     FDILSALVERAGEVVGKPKPADQRQAASA"
     gene            complement(8137..10989)
                     /locus_tag="VF991_01200"
     CDS             complement(8137..10989)
                     /locus_tag="VF991_01200"
                     /inference="COORDINATES: protein motif:HMM:NF013124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX9555078.1"
                     /translation="MDGPAITFGPFRLFAGHRLLLEGEKPVRLGSRAFDILTALVERA
                     GEVVRKEELIARAWPNTFVEEANLKIQVSALRRALGDGQGGHRYVITVPGRGYDFVAP
                     VRREEPTRAASPPAIAPTAPTAVHNLPFAVTRMIGRDDAVAALVARLSSQRLVTIVGP
                     GGIGKTTVALAVAERLIADYEHGVWLVDLAPLGDSRLVPSAVATVLGLEIGAEDPLPG
                     LVATLRDSRMLLLLDNCEPVIEAAARLTAAVLGGAPGVTVLATSREPLSVAGESEYRL
                     RPLGTPPPSSNLLAAEALVFPAVQLFVERVTATVEDFALTDANAPPVVEICRKLDGLP
                     LAIEFAAPRVEVLGLEGLAAHLDDNLPLFGGERRAATPRHRTMRAVLDWSYGLLNDDE
                     QRFFRALGIFAGGFTAEAATAVALDAAKTGLEAMDRLADLVAKSLVVADVTGTKPWFR
                     LLETTRAYVVEKLGESTEREPIARRHAQYYRQLFERAEAEAPTRAAGEWLADYAAEID
                     NLRAALDWAFSPGGDGMIGGALTTAAFPLWMRLSLLEERRSRAQQALDALRTGGARNP
                     RQEMRLHNAIGNASTEAPEMSAAFTRNLEIAENLGDAEYRLRALHGLHFCSYASGRYR
                     AALESAQKFHDLATSASDPHALLLSERMIGGAKHFLGDQIGARRHLEQALDRVATDQG
                     RDVTRFATDVRMTLRAFLARVLWLQGFPDQAVRAADMSIGEAQAIGHVMSLGYALALA
                     ACPIALWVGNLSTAARYTEVLIDHSSKHGLSLLSKFASRFQRVLALKGGDLGTGSRPR
                     RAASDELAEPTVNFGFLLGLSEQAEALGDAGRIAEGLALIDAGIEQCEPGWLTPELFR
                     LKGELLLLQSPSAAAQTAEDLFRQALDRARRHQAVAWELRAATSLAHLLRNEGRAADG
                     IACLQPVYERFTEGFGTVDLIAAKQLLDELGHARSD"
     gene            complement(11154..11405)
                     /locus_tag="VF991_01205"
     CDS             complement(11154..11405)
                     /locus_tag="VF991_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555079.1"
                     /translation="MSGKTLTRHRLLRDAGGSSNKLDQCWEFSGDDPTARLAAALEAQ
                     PASSGHNSGEATGEKPHYWGHRGRVRERALKAGVEPLAD"
     gene            complement(11585..12466)
                     /gene="map"
                     /locus_tag="VF991_01210"
     CDS             complement(11585..12466)
                     /gene="map"
                     /locus_tag="VF991_01210"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEX9555080.1"
                     /translation="MSSPRDFSDDSDDYWRRDERTIKVHGPEGFEGMRRAGRLAAETL
                     DFITPHVQPGISTAELDKLCHDFILDHKAIPAPLGYRGYPKSICTSINHVVCHGIPSD
                     KRLQSGDIVNIDVTVILDGWYGDTSRMYFAGEVGVKARRLCDVTYEAMMRGIAAAQPG
                     ARVGDIGHAIQSYVEAQRFSVVRDFSGHGLGRIFHDAPNILHYGKPGTGPVLRPGMFF
                     TVEPMVNAGTWQVKILGDGWTAVTRDKQLSAQFEHSVGITETGVEFFTLSPRELAKPP
                     YDLGQAKPADQHHAAPA"
     gene            12574..13335
                     /locus_tag="VF991_01215"
     CDS             12574..13335
                     /locus_tag="VF991_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HEX9555081.1"
                     /translation="MSQPAKIVTACIVVIGNEILSGRTRDANIAYLAAELGALGVRVM
                     ECRIIADVEATIVATINEVRRKFDYVFTTGGIGPTHDDITADSIAKAFGVGISEHPEA
                     VARMTRHYGDPALFTPARRRMARVPHGGILVDNPVSVAPGFQMENVFTFAGIPKVAEA
                     MFQSMKHRLVGGDPVLSRTVRTNLPEGIIAEPLGALQKRYDDLDIGSYPAFRNGKPSV
                     SLVLRGTDDARLAAASVELMATIRKMNGEAEEFAQ"
     gene            13339..14406
                     /locus_tag="VF991_01220"
     CDS             13339..14406
                     /locus_tag="VF991_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006727374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HEX9555082.1"
                     /translation="MTWLPPAAQWILLIALSAGIGAFLLWLQAPAALMLGPLIAAMML
                     AAGGGRVRFPLPPFVVAQGIIGCLIARMVPLTIIGDILDHWLLFTAGVLFVVAASSLL
                     GWLMTRLHMLPGTTALWGTSPGAASVMTIMAESYGADIRLVAVMQYLRVVLVAAIAAL
                     VAKVFGVSASQGPAAIVWFPPIAWLPLTETLALAVAGPLVARALRIPAGAFLVPMVAG
                     IVLTHFGWLAIELPAWLLAASYALVGWNIGLRFTRPLLIHAARALPRIVGCTVLLIAL
                     CGLVALMLVYGAGVDPLTAYLATSPGGSDSIAIIAASTDVDVSFVMAMQTVRMIAVLF
                     LAPVLTKFIAERVSWRDDRPP"
     gene            14390..>14610
                     /locus_tag="VF991_01225"
     CDS             14390..>14610
                     /locus_tag="VF991_01225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006133491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9555083.1"
                     /translation="MTVLHDMTAAELLAAYKSKKLSPVEATDAVIARIEAWEPKLKAL
                     YAPDFEGARRQAKASEKRWQAGRPQGALDG"
BASE COUNT         2443 a         4767 c         4934 g         2466 t
ORIGIN      
        1 gcgttgcaat tggcgagacg ccagacctgg cggcccggct acaggccgcg gcggcgcccg
       61 gcgaggtcgt gatcgccgcc agcacgcatc ggctggtggg gcggatgttc gactgccgcg
      121 cgctcggccc catcgaggtg aaagggctgc cgcagccgat cggggcgtgg caggtccgcg
      181 gcacggcggc cggcgtcagc cggttcgagg cgcggcgctc gggcgcgcta tcaccgttcg
      241 tcggccggca ggaagaaatc gagctgctgc tgcgccgttg ggatcgggcc aagcgcggcg
      301 agggccgggt cgtgctgctc tcgggcgagc ccggcatcgg caagtcgcgc atcgccgaaa
      361 gcctgctggt cgggctcgcg ggcgagccgc atgcgtgcct tcgctatttc tgctcacctc
      421 accacgcgca cagcgcgctc cacccgttca ttgcgcagtt ggagcgggcg gcgagcttcg
      481 agccgggcag cgatgccggg gcaaagctcg acaaactgga ggccctgctc aggccgaccg
      541 caaaaaatgc gccaagagac gtggcgctca tcgccgagct gctgggagtg ccggcacaag
      601 gacgctatcc ggcgctggca gtcagcccgc agcagaaggg cgagatgact ctcacggcgc
      661 tgctcgagca tctcgacggg gtcgcggcgc agggccccgt cctaatcgtg ttcgaggatg
      721 cccactggat cgatccgaca tcgcaggacc tgctcaatcg catggtcgcc cgcgtcacca
      781 accttccggt gctgctggtc gtcacggtcc ggccggagct gcagccggcg tgggtcggtg
      841 agccgcatgt gacgatgctg cccctgagtc gcctcggccg ccgcgacagc gccggcatca
      901 tcgccagtgt cgccaagcac aaggtgctgc ccgacgaggt ggtccagcag gtgctggcgc
      961 acaccgatgg cgtgccgctg ttcgtcgagg agctgacccg cacgttgctc gagggcgggt
     1021 tgttgcgcga ggcaaccgac agctacgtgc tcgaccggcc gctctcgccc cttgccgtac
     1081 cgacaacgct gcaggactcg ctggttgccc gcctcgaccg gcttggcccc ggcaaggatg
     1141 tggcgatgat cggcgccgcg atcgggcggg agttctccca cgaactgatt gccgctgtat
     1201 ccgccctgcc tccggtggga ctcgatgcgg ccctcgagcg gctgaccggc tccggcctcg
     1261 tctcccggcg cggaacgccg ccatacgcca cctacgcgtt caagcatgcg ctggtgcagg
     1321 acgccgccta cgccacgttg ctcaagagcc gacggcggca gttgcatttg agcatcgcca
     1381 atgccctggt cgaacggttc ccggcgctga ccgaacggct gcccgaggtc gtcgcccagc
     1441 atttcaccaa ggccgggctt gcgagcgagg cgatcggcta ttggcgcaag gcgggtcagc
     1501 ttgcaagcgc gcgatcggcc aaccgggagg ccgtgatgtg cttcgagcaa gcgctgaccg
     1561 ccctcggcca tctgccggag acacgcgaga cgctggagtg ggctatcgat cttcgcttcg
     1621 atctgaaaac cgcactccat ccgctcggag aattcgagcg gatcttcagc tatctccacg
     1681 gagccgaagg cctggccagg atactcgacg atcaacggcg actcgggcag ctgtccgtcc
     1741 atctatgcca cgccctctgg atgacggggc agccgacgaa agcactggcg ttcggccagc
     1801 gcggtcaggc tattgccgag tcgctcgggg atgtcccgct ccaggtgatg gcaaatctct
     1861 acctcggcgc ggtctgcatg aggacggggg actatcggcg ggccgagaag cttctcctga
     1921 acgtcctgcg gttgctcgaa ggcgagctga gccgggaacg gtttgacctc gcggaatttc
     1981 ctgccgtggt ggcccgttgc tacttgacca tgattctcgc gatccagggc cgattcaagg
     2041 aagggcttgc ccacggccag gaaggcatgc gcctcgcgga caagctggat catccctaca
     2101 gcatgtgcca gttatgctgg tatctcgcct atcttcagat caccagggga gaactcggcg
     2161 atgccgtctg cacgctcgaa cgcgggcagg cgctggctcg cgagtggaac ctcgcctatt
     2221 tttcactggc ccacacggcg ggtctgggtt acgcgcacgc cctctcgggg cgggctgccg
     2281 agggcattcc cttgctggag cgcgcggtga gcgccgccga gaccatggga tacggagctg
     2341 cccagtgggc cttcctgatg tatctcggcg aggcgcatct cctcgccgac aggatcgagg
     2401 acgctttcga actcgccggg cgcgcccttg cgtattaccg cgagcagggc caacgcccct
     2461 acgaggcgtc ggccctccga ctcctcggcg acatcaccgc ccgccgcgat tcccccgcac
     2521 aagccgatgg cctctaccgc gacgcgctcg cgctcgctga agagctcggg atgcgccctc
     2581 tcgtcgccca ctgccacctc ggcctcggca agctctaccg gcgcacgggc actcgcaagc
     2641 aggcgcagaa gcacgtcgcg acggcgatga cgatgtaccg cgacatgggc atgacgcact
     2701 ggctggagca ggcggagcgg gcgctctagt actggatact cgctgggatg gtcagctcgt
     2761 actgcgtgta cgctgggtct ggaggctccg gcgcctgagt cacgtccagc ggcatgaagg
     2821 gtttgtcgag gctgtacgtg tattgctggc tgacctccgt caacgcattg tggaagaaca
     2881 gctgagggag ggcgagcatc gaatcggtga aggcataata cgtctcgttc aggttgggcg
     2941 ccatggcgtg aggtccgaag aacaatcgct ccgccagttc ggcgcggtac aggtcatcac
     3001 cgttggccac gtcgccgact ttcgtggggc cgccaacggg cggcggaccg ggcagcggcg
     3061 gatagttccg gatgcgcagg aatttgaatt tgctcggaat gttcagcccg aaactgtaat
     3121 ggtcaccgcc gtgggccacc gtcacgtccc acatgaagat tgccatcgcc tgggccagac
     3181 agtcctcgtc gaggatcccc ccgggagcga tggtcttctc gtcgggaaaa ccccgtacgt
     3241 aggtggaggt gtagcgcgcc caccgggtga cgtaggtgtc ctgcttgtcg gccttgatga
     3301 tttcccgggc gaccgccttg cagagggtca gaaacggcgg gaagtaggcg gcgagccatt
     3361 ggccgtaggg cgaatcaaac cccatctgcg gcttcatgta gtcatagggc ggataggcat
     3421 cgccgaacca ggcatcgcta agtccggtgt acgcggcccc gaacagaagc ttgagatcgt
     3481 aggcgttgcc catgagggga tcgaaccacg tcgcctgcgc gttgttgttg gcgaccgagt
     3541 tgggaccttc gagaaccgtg ttgtccaggg cgagcgtgta actggtgtgg ggatagagaa
     3601 gctggaacaa cgggtgcgtg tgcggcaccg ccgtcttggt gatcgcattg accgaatcca
     3661 tcgggaaatg cagcgccgga tggacgacga acagcatgtg atacgcgcaa gcctgcaaag
     3721 cgtagatctt cgccaggctc caggcgtcgc cgcctcccgg gaaaacgaac acatcctggg
     3781 cgtcggtttc accgcgaaat cggatataca cacattggcg gatgccggcg ccatcctgcc
     3841 cgaagacgca cacgacgggc gcgcaataca ttcctgccag cggctcgacc agtttcatcg
     3901 cgctgaaatc gtatttccag aacttcgctg cgttgggggc cctgtcgagg tgtcggcggt
     3961 ccgcgtccag cttgggcttc atgaatcgcg tgtagagggt gttcaacatc agcccgttga
     4021 actcgtcgtc gttcggaatc agggactggc cgtcaaagat cgcgcccttg gctgcaagcg
     4081 gcggaagggc ggccaagccg atcagcaagc gcttgccgac ggtagcatcc catacaaggg
     4141 actcgaccag cggtacgctg agaacctcgg ctgcctcttt cagcggatgc gagggagaag
     4201 gttgcggcca aggacccttg cgcccgtaga gaaactggtc cggcggcaga tcgggactgc
     4261 tcgggtcggt gctcatggcc tgccctccac aagaataggc ttattgtctt ttttggttgt
     4321 caggttggtt gttatacatc ctgaaaaggc ggggcgtgaa ggcgataaag gctacggtca
     4381 ggtgaaagcc cgccagcgtt gcgcttggcg agcagcaggc catgacgagg gcgtcgtccc
     4441 agcccggatc gatgtccaac acgatttttt caaggcggcc ccccagctat tcgttgaacc
     4501 tgtaaacaca ggttagtcgc agtgcgctgt ccatattggc tagccgtagt ggcagggcca
     4561 tctgtactgc agcacttcga gcgccagcgc gcggaagtgg tgctccttga ccgatggata
     4621 gaccgcctcg atttcttcca cgatcgccgc agcgatgcgg acgcgcggcg cgtcgacggg
     4681 cacggcgtag caaaagtcgg gaggaagctg ttcgccgaga tagagcaggc cgtcgatcag
     4741 gccgctgcag aatccggcct cggcggaggt cgggatgccc tgcgtcgcga cgagggaacg
     4801 gcatcccggg agcaccgcct cgacggtcac gttgggccgc gcaccggggc cagccaaggc
     4861 ggcgtggccg tcggccagcc cgatcaggac gacggccagg gcaaggcgca ggaatgctcc
     4921 gatcggcatc ttcatacgag gaagctcagg cccgacacgg ccagcagcag gttgacggcc
     4981 atcgagaatt gccggtcgct caatcgcttg aagcaggcca tgcccaaagt gcagccgagc
     5041 agcatcgccg gcagatggac gatgccggtg aaatcgaacg gcggccggct ttgcggaaag
     5101 aagcctggca gcgccatgag ggcgatggcc gcgagctgca cgatcaggat gaagggctgg
     5161 tagagcgccc gttgcttctc cttgggccag cccttgaagc cgcaccagat ggtgacgaag
     5221 gcgccaggaa aggcggccgc gccgccggtc acgccgccca ggaagccggc caggaggtcg
     5281 aacagggcgt tctgacgccg cacgatcatg ggacgccgcg ccatcatgaa gaaggcgtag
     5341 agcatgaggg caacgccgat cacctgggca tagacggcag gccgcgtgtg cagcagcacg
     5401 aagatgccga gcggcagacc ggccgtggcg cccgcgagaa ataccgacag ggcgcgccag
     5461 gggatgtccc gccgcaggcc ccacaccatc agcgactgac cgccgacgct gcagatcatc
     5521 atgatctgga cggcgcgcac cggatcgtcg atcaggtgaa agagcatcgc gccgcaaatg
     5581 gcggagaagg caaagcctgc gatgctggaa accagcgagg cggcaaggat cgccagcgag
     5641 acccagggcg cgcgttccgc cgggactacc gccgacagcc atatcgtgca gactgccagc
     5701 gccagcacgc tgcctgtcgc cagcgcggag cgataggctg gcgcccgaag ccgcggtgcg
     5761 gtcacggcac ggaagtgcat gagggcggcg aggctcaatt tgccgagtcc cagatcaccc
     5821 tggcgccgcg gtcgcgccgt atcgcatcga aggcgtccgg tcggcgtgtg ttgttcacgc
     5881 gattgaccgc catgacggcc gcaatctgcg cgatgaggaa caccgcaaag gccaagcctc
     5941 cgagaattgt tgccattgtg ctctcctctt gggttcagcg gccgtggccg cgcctgacgc
     6001 cgtgatctgc gggttactca gctctgttcg cccggccagt ggccgagcca ccggtagtct
     6061 tccaatccac gcccatccca tgcgcagatg gcgcgctcga ggatcaccgc atctcccgga
     6121 gggttgcgct gcagagctta ggcaacgggg cctccctctg ggcccacgct acccgcaatt
     6181 tcttgatcgg gttcgttttc acggagcggc gtaggtcgtc gctccaagaa ggtccatccg
     6241 ttgttcgggc gtcaggcgca attcagccgc cagcaccagc gccacgagaa gtacaaccac
     6301 cgtggcggcg agaatgcgcc cggtgattgc ggcgaaatac caggcgcggt cgtcgtcggc
     6361 gacggtgccg ggtgtcggga acttgagctt gaattgctgg gccatcggtc cctcctttgg
     6421 gtctgtctta accatgttcg ctcagccagc gcgtcagcca cgcgtagtcc tccagcgcac
     6481 gcccatccca accgtaaagg cagtgacgcc gggctatgct gagtgtgtga tttgcacgct
     6541 cgaggatcgg cgcatccgcc ggactgttcc gctcgagaag cggtgcaagc tgagcgacgc
     6601 tcgcccggtc agcctccagg cagcgaagtg atacgccggc cggttccaca atcccgacat
     6661 cgcgatcggt gctctgaaca tcgggaatcg gctggtaggc gaggacgccg acggcgatgg
     6721 cgacggcggc ggagacagcg aaaatcgcca gatttgaaga ccttgggtct aatcgacgct
     6781 cacttgcggc catgatccac tcccccagtg tgatccaccg gggaggatct cgcgggctcg
     6841 tgacaccgcc ctatgtgcag gcgtgacata ggcgtgaaat cgacacgccg ttgccgtttc
     6901 ctgcctcttt atgtgagcag cccgaggctc cggaagctcg catggccctt gcgaccgatc
     6961 accaggtgat cgtggatcgc aatgcccagc gcctcggccg ccttggcgat ttccttcgtc
     7021 atctcgatgt cgtcgcgcga cggcttgggg tcgcccgagg gatggttgtg caccaggatc
     7081 agcgcggcgg cattgagcgc cagggcgcgc ttgacgacct cgcgcggata gaccggcgtg
     7141 tggtcgatgg tgccgcgctg ctgcacctcg tcggctatga gcacgttctt gcggtcgagg
     7201 aagaggatgc ggaactgctc ggtcttctcg tgcgccagcg ccgtgtggca gtagtcgatg
     7261 agctgctgcc agttggtcag gaccggcatg tccttgacct tgcgctcggc aagccgccgg
     7321 ccggcctcgc gcgaggcctt gaacagcacg agcgtgcgct ggtcgatgtc gaactcgcgc
     7381 agctgcgcgg gctcggcggc aaagacgtcg cccagcgtgc cgaaacgatc cagcagcctc
     7441 ttggcgagcg gcttggtgtc gatgcgttcg atcgaataga agagcagcag ctcaagcagc
     7501 tcatagtctt ccagcaactc ggcgcccgcc ctcatcacgc gctcccgcac acggccgcga
     7561 tggccgtgat agtgaggctg cggctcggcc gcgtcggcat tgtgtccggc gcccgccggc
     7621 cgggcttcaa gcgccgaggc gagccgggtg gttggatcgt cgccggagaa ttcccagcac
     7681 tggtcaagct tgttccaggt gccgcccgcc tcgcgcagca gcaggcggaa cacaagagta
     7741 ttgccgatga cacgccagcg atcctccccg gcctggacgc gcaaacccgc cgacagaagc
     7801 gtgcacagcg cgtcgtcgct ggcggcagcg acggcctttg cagtgcggct ggtcttggct
     7861 tcgcaacgtc ggtccacacc tgggaggacg aaccgacagg gccaaacgct acagggagac
     7921 ttgacgtgcc ctcaggccga cgccgcctgg cgctggtcgg cgggcttggg cttgccgacc
     7981 acctcgccgg cgcgctcgac cagagcgctc aggatgtcga aggcacggct gccgaggcgc
     8041 acgggcttgt cgccttcgag taggagccgc tgggcggcaa gaagcctgta cgggccaaac
     8101 gcaaaggcgc gttcgccgcc ggctgttggt ggtggcttag tcgctccggg catggcccag
     8161 ctcgtccagc aactgtttcg ccgcgatcag atccacggtg ccgaagcctt cggtaaatct
     8221 ctcgtagacc ggctggaggc aggcgatccc gtcggcggcg cggccttcat tgcgcaagag
     8281 gtgagcgagg ctggtcgccg cgcgcagctc ccacgccacg gcctggtgtc ggcgcgcgcg
     8341 gtcgagcgcc tgccggaaga gatcctccgc ggtctgcgcg gctgcagacg ggctctgcaa
     8401 aagcaggagt tcgcctttga ggcggaacaa ctcaggcgtg agccagcccg gctcacactg
     8461 ctcgatccca gcgtcgatca gcgcgagtcc ctccgcgatc cttccggcat cgcccaaggc
     8521 ttctgcctgt tcactcaggc cgagcaagaa cccaaaattg accgtcggct cggcgagctc
     8581 gtcggaagcg gcgcgccgcg gccgcgaccc cgtgccgagg tcaccaccct tgagggcgag
     8641 gactcgctgg aacctggaag cgaacttgct caagagcgac aagccatgct tgctcgaatg
     8701 gtcgatcagc acttccgtgt agcgcgccgc ggtgctcagg ttgcccaccc agagcgcgat
     8761 cgggcatgcc gccaatgcca gggcgtaacc cagcgacatg acgtgaccga tcgcctgcgc
     8821 ctctccgatg ctcatgtcgg cagcccgcac cgcctgatcc gggaatccct gcagccacag
     8881 cacccgcgca agaaatgcgc gcagcgtcat gcgcacgtca gtcgcgaagc gcgtgacatc
     8941 ccgtccctgg tcggtggcaa cgcgatccag cgcctgctcc aaatggcgcc gggcgccgat
     9001 ctgatcgccg agaaaatgct tggctccgcc gatcatgcgc tcgcttagga ggagcgcgtg
     9061 cggatccgac gcactcgttg ccagatcatg gaacttttgc gcggattcca gcgcagcacg
     9121 gtatcgaccg ctcgcgtagc tacagaaatg caggccgtgg agcgcgcgca gccggtactc
     9181 cgcgtcgccg aggttctccg cgatctcgag gtttctcgtg aacgcagcgc tcatctcggg
     9241 cgcttcggtc gacgcattgc cgatcgcgtt gtgcagcctc atttcctgcc gcgggttccg
     9301 ggccccgcca gttcgtagag cgtcaagcgc ctgctgggcg cgactgcggc gctcctcgag
     9361 cagcgatagg cgcatccaga gcgggaacgc ggcggtggtc agcgccccgc cgatcatgcc
     9421 gtcgccgccg ggagaaaatg cccagtcgag cgccgcgcgt aaattgtcga tttcggcggc
     9481 ataatccgcg agccattcgc ctgcagcccg tgtcggcgct tcagcttcgg cgcgctcgaa
     9541 aagctggcgg tagtactgcg cgtggcggcg tgcgatcggt tctcgctcgg tgctctcgcc
     9601 aagtttctcg accacgtagg cgcgggtcgt ctcgagcagc cggaaccacg gcttggtgcc
     9661 ggtgacatcg gcaacgacca gcgatttcgc gaccagatcg gccaggcggt ccatcgcctc
     9721 aagaccggtc ttcgcggcat ccaatgccac ggcggtggcc gcctcggccg tgaacccgcc
     9781 ggcaaagatg ccgagcgccc ggaagaatcg ctgctcgtcg tcgttcagca agccgtagct
     9841 ccaatcgagg acggcccgca tcgtccggtg ccgcggcgtt gccgcgcggc gctccccgcc
     9901 gaacagcggt aagttgtcgt ccagatgcgc ggcaagtccc tcgagtccga gcacctcgac
     9961 gcggggtgcg gcgaactcga tcgccagcgg caagccgtcg agcttccggc aaatttcgac
    10021 gaccggcggt gcattcgcat cggtcagcgc gaagtcttcg acggtcgcgg tcacacgctc
    10081 gacgaacagc tgaacggcgg ggaacaccag cgcttcggcg gctaacagat tggacgacgg
    10141 cggcggggtg ccgagcggcc tgaggcggta ctcgctttcg cccgcgacgc tgagcggctc
    10201 ccggcttgtc gccagaacgg tgacgcccgg cgcgccgcca agaactgccg ccgtcagcct
    10261 ggccgccgct tcgatcaccg gctcgcaatt gtcgagcagc agcagcatcc ggctgtcccg
    10321 gagggtggcg accaggccgg gaagcggatc ttcggcgccg atttccaggc cgagtacggt
    10381 tgcgacggcg ctcggcacca gacgcgagtc gccgagcggc gccaggtcga ccagccagac
    10441 gccgtgctca tagtcggcga tcaggcgctc ggcgacggcg agggcgaccg tggtcttgcc
    10501 gatcccaccg gggccgacga tcgtcaccag gcgctggctg gacaatcgcg cgacgagcgc
    10561 cgccaccgcg tcgtcgcggc cgatcatccg ggttaccgca aacggcagat tgtgcaccgc
    10621 cgtgggcgcc gtaggcgcga tggccggggg cgaggcggcc cgagttggct cctcacggcg
    10681 caccggggcg acgaagtcgt agccccgtcc cggaacggtg atgacatagc gatggccgcc
    10741 ttggccgtca ccgagggcgc ggcgcaacgc gctgacctga atcttgaggt ttgcctcttc
    10801 gacgaacgtg ttcggccagg cgcgggcgat cagttcctct ttgcggacga cttctccggc
    10861 ccgctcgacc agcgcggtca gaatgtcgaa ggcgcggctc cccagccgga ccggcttttc
    10921 gccctcgagc agcagccggt gccccgcaaa gaggcggaac gggccaaatg tgatcgcggg
    10981 tccatccatg ggggctcctc ggagaccccc atttttagcc acttttactt gaccgaggcg
    11041 agtgccaggg tgcggccaag tgcgccatcg atgacaaccg cgccgatatc gatcggagcc
    11101 gccactttac cgttgcgcat tgagccggga gcggcgcgcc gaccggcgtc agctcagtcg
    11161 gccagcggct cgacgcccgc cttcagcgcc cgctcgcgca cgcggccgcg atggccccag
    11221 tagtgcggct tctcaccggt cgcctcaccg ctgttgtggc cggaggatgc cggctgggcc
    11281 tcgagggcgg cagcgagccg cgccgtcgga tcgtcgccgg aaaactccca gcactggtcg
    11341 agcttgttcg agctgccgcc cgcgtcgcgc agcagccggt ggcgggttag ggtcttgccg
    11401 ctcactcgcc aacgatcctc gcccgcctga aggcgcaggc cggctgccgc caaagtcggc
    11461 agggcgtcgt cgtcggactc ggaaacggcc tccgcacggc gccgggtctt ggtctcgatc
    11521 tgcctttcca cctatcggag gacgagccgg cagagaagat cgttacagca gatgctcgag
    11581 atcctcaggc cggcgcggcg tggtgctgat cggcgggctt ggcctggccg agatcgtagg
    11641 gcggcttggc cagttcccta ggcgagaggg tgaagaattc gacgccggtc tcggtgatgc
    11701 cgacggaatg ctcgaactgg gcggagagct gcttgtcgcg cgtcaccgcc gtccagccgt
    11761 cgcccaggat cttcacctgc caggtgccgg cattcaccat cggctcgacg gtgaagaaca
    11821 tgccgggccg gagcactggg ccggtgccgg gcttgccgta atgcaggatg ttgggcgcgt
    11881 cgtggaaaat gcggccgagc ccgtggcccg agaagtcgcg caccacggag aagcgctgcg
    11941 cctcgacgta gctctggatg gcatggccga tgtcgccgac gcgcgcgccc ggctgggcgg
    12001 cggcgatgcc gcgcatcatc gcctcgtagg tgacgtcgca caggcggcgc gccttcacgc
    12061 cgacctcgcc cgcgaaatac atgcggctgg tgtcgccgta ccagccgtcg aggatcaccg
    12121 tgacgtcgat attgacgatg tcgcccgact gcaggcgctt gtcggaggga atgccgtgac
    12181 agaccacgtg gttgatcgag gtgcagatcg acttcggata gccgcgatag ccgagcggcg
    12241 cggggatcgc cttgtggtcg aggatgaagt cgtggcagag cttgtcgagc tcagccgtgc
    12301 tgatgccggg ctgaacgtga ggcgtgatga agtcgagcgt ctcggccgcc agccggccgg
    12361 cacggcgcat gccctcgaag ccctcggggc catggacctt gatcgtgcgc tcgtcgcgcc
    12421 gccagtaatc gtcgctgtcg tcgctgaaat cgcggggact actcatgccc catatttggc
    12481 atgcgatatc gtctctaaca aggccgtgtg gcccgcttgg cccaccggcg cgcctccgct
    12541 agggtcctga aagaaaagga aaaagagcgc cgcatgtccc agccggcaaa aatcgtcacc
    12601 gcctgcatcg tcgtcatcgg caacgagatc ctgagcgggc ggacgcggga cgccaacatc
    12661 gcctatctcg cggccgagct cggggcgctg ggcgtgcggg tcatggaatg ccgcatcatc
    12721 gccgacgtcg aggccacgat cgtcgccacc atcaacgagg tgcgcagaaa gttcgattac
    12781 gtcttcacca ccggcggcat cggcccgacg cacgacgaca tcaccgccga ttcgatcgcc
    12841 aaggcgttcg gcgtcggcat ctccgagcat cccgaggcgg tcgcgcgcat gacccggcat
    12901 tacggcgacc cggcgctgtt cacgccggcc cgccggcgca tggcgcgggt gccgcatggc
    12961 ggcatcctgg tcgacaaccc ggtgtcggtg gcgcccggct tccagatgga gaacgtcttc
    13021 accttcgccg gcatccccaa ggtcgccgag gcgatgttcc agtcgatgaa gcaccgcctg
    13081 gtcggcggcg atccggtgct gtcgcgcacc gtgcgcacca acctgcccga gggcatcatc
    13141 gccgagccgc tgggcgccct gcagaagcgt tacgacgatc tcgacatcgg cagctatccc
    13201 gccttccgca acggcaagcc cagcgtctcg ctggtactgc gcggcacgga tgatgcacgg
    13261 ttggcggcgg cctcggtcga gctgatggcc acgatccgca agatgaacgg cgaggcggag
    13321 gagtttgccc agtaatccat gacttggctc ccgccagcgg cacaatggat cctgctcatt
    13381 gccctgtcgg cgggcatcgg tgccttcctg ctatggctgc aggcgccggc cgcgttgatg
    13441 ctgggacccc tgatcgcggc catgatgctg gcggccggcg gcggcagggt ccgctttccc
    13501 ttgccgccct ttgtcgtcgc ccaggggatc atcggctgcc tgatcgccag gatggtgccg
    13561 ctcaccatca tcggcgacat cctcgatcat tggctgctct tcaccgccgg cgtgctgttc
    13621 gtggtcgcgg ccagcagtct tctcggctgg ctgatgaccc ggctgcacat gctgcccggc
    13681 accacggcgc tgtggggaac tagtcccggg gcggcctcgg tgatgacgat catggccgaa
    13741 tcctacggtg ccgacatcag gctggtcgcc gtcatgcagt acttgcgggt cgtcctggtg
    13801 gcggcgatcg cggccttggt ggcgaaggtt ttcggtgtca gcgcctcgca gggtcccgcc
    13861 gccatcgtct ggtttccgcc gatcgcctgg ctgccgctga cggagacgct tgccctggca
    13921 gtggccggcc cgctggtcgc ccgcgcgctg cgcatcccgg ccggcgcctt cctggtgccg
    13981 atggtcgcgg gcatcgtgct cacgcatttc ggctggctcg ccatcgagct gccggcgtgg
    14041 ctgctcgcgg caagttacgc cctggtcggc tggaacatcg gcctgcgctt cacgcgcccg
    14101 ctgctcatcc atgccgcgcg ggcgctgccg cgcatcgtcg gctgcacggt gctgttgatc
    14161 gcgctgtgcg gcctggtcgc gctcatgctt gtctatggcg ccggcgtcga tccgctgacg
    14221 gcctacctgg ccaccagccc gggcggctcc gattcgattg ccatcattgc ggcgtcgacc
    14281 gacgtcgacg tgtcgttcgt catggccatg cagacggtgc ggatgatcgc cgtgctgttt
    14341 ctggctccag ttttgaccaa attcatcgcc gaacgtgtaa gttggcgcga tgaccgtcct
    14401 ccatgacatg accgcggccg agctgctggc cgcctacaag agcaagaagc tgtctcccgt
    14461 cgaggcgacc gatgccgtca tcgcccgcat cgaggcctgg gaaccgaaac tcaaggcgct
    14521 ttatgcgccc gatttcgaag gcgcgcggcg gcaggccaag gcgtcggaaa agcgctggca
    14581 ggctggccgg ccgcagggcg cgttggatgg
//
LOCUS       DASWGA010000058         4370 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2155593, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000058 DASWGA010000000
VERSION     DASWGA010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4370
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2155593"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..3549
                     /locus_tag="VF991_01230"
     CDS             202..3549
                     /locus_tag="VF991_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX9555084.1"
                     /translation="MPKKLLIANRGEIAIRIAQAAAELGIASVGIYSEDDATSLHVRR
                     VDQAVALKGKGAAAYLDIAGVIAAAKKAGCDSLHPGYGFLAENAGFAQACAEARITFV
                     GPTPEQLKLFGDKARARGHAQKGKVPVLPGTDGATDLASATAFFRKHAKSGIALKAIA
                     GGGGRGMRLIKSEGEITDAFARATAEAKSAFGNGDLYAERLVGRARHIEVQIVGDGKG
                     GIVALGERECTLQRRSQKIVELAPSPNLKPALRKKIVEAAIAMAKAVKYRNLGTFEFL
                     VDGTEFFFIEANPRLQVEHTVTEEVWGVDLVKAQLLLAGGASLAKAGLEGAAPRGHAI
                     QLRINMETMTADGSARPGGGTLTVFEPPSGPGVRVDTYGYAGYRTNPNFDSLLAKLIV
                     HSPSADFADALARAERALAAFRLEGAPSNIAFLRALLAHGDFRADKVHTRFVDEHAKM
                     LIDAAAKLQPGLFFQAAPTTAVRQAGARVDAVDPLAVLAFGKTNQQAAAETATDAPEG
                     TVAVPAPMQGTIVSISVKEGDAVAAGQPLLIMDAMKMQHEIRSPARGYVRRIAVEAGE
                     TIYEGHPLLFVEEADVEVKGAAAEEKIDLDHIRPDLAEYFERRALTLDDQRPGAVARR
                     RKTNQRTARQNLDDLVDPGSFVEWGAFAIASQRTRRTAEDLIEKTPADGLITGIGRVN
                     GSLFGPERSRVAVAHYDYTVLAGTQGKTNHHKKDRLFEIVEEQRIPLVFFTEGGGGRP
                     GDVDVQSVAGLNTMAFHIFGRLSGVSPLVGINSGRCFAGNAALLGCCDVVIATKNSSI
                     GMGGPAMIEGGNLGVFAPEEVGPMSVQVPNGTVDIAVEDEAEAVAVAKKYLSYFQGAL
                     PEWRAADQRLLRRAIPENRLRVYDVRDVIATLCDEGSLLELRRAFGPGMVTALVRIEG
                     KPLGIVANNPMHLAGAIDSDGSDKAARFLQLCDAFDLPVLFLCDTPGMMVGPEVEKTA
                     LVRHCSRLFVTGANLGVPFGTIVLRKAYGLGAQAMAGGSFHAGTFAISWPTGEFGGMG
                     LEGAVKLGYRKELEAVTDPAERRALFDKMVAAAYARGKALSTATYFEVDEVIDPADSR
                     RWIATALLDAKPRPRNGHKKRPNIDTW"
     gene            3599..>4370
                     /locus_tag="VF991_01235"
     CDS             3599..>4370
                     /locus_tag="VF991_01235"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555085.1"
                     /translation="MSITASDRSVSRRGLLGATLVLVSPTSVAIAQPVPVLGYVAAKN
                     ADPKRLEVFKQGLTELGYVEGKNIRIEYREAVLDDEYRGVMAELVAGKIDIILAANVA
                     AAVAAAKSTSTVPIVMLAVNDPVGLGLVKSLERPGTNVTGTTMYAPQLIGERLRILAR
                     LVTNLDKISVVLNGNNANNTSQLELVRSEGRALGIEAQGLDIRRPEDVAPAFDKAVAF
                     GAKALVNCVDSFINSRRFALAAEAAKHRLPAIYTDVEYV"
BASE COUNT          749 a         1479 c         1463 g          679 t
ORIGIN      
        1 tgccgaggat caccgcttgc gctgccagca cgtcgtcggg accggcctgc aagggcgcca
       61 ccacgtgcac ctcgacgccc gtttcgctca gcgcgccgcg ttccgtcgcc tcacgcaagg
      121 agagggtgtt ctccgacggc gcgtgcgcca caatgagcag ccttttcacc atgaagagtt
      181 tttagcccga gatgcgccga catgcctaaa aaactgctga tcgccaaccg cggcgagatc
      241 gccatccgca tcgcccaggc cgccgccgag ctcggcatcg cctcggtcgg catctattcc
      301 gaggacgacg ccacgtcgct gcatgtcagg cgggtcgacc aggcggtggc gctcaagggc
      361 aagggcgcgg cggcctatct cgacatcgcc ggcgtgatcg cggcggccaa gaaggccggc
      421 tgtgattctc tgcatccggg ctatggcttt cttgccgaga acgcaggctt cgcccaggcg
      481 tgcgccgagg ccaggatcac cttcgtcggc ccgacgcccg agcagctgaa actgttcggc
      541 gacaaggcgc gcgcccgtgg ccatgcccag aagggcaagg tgccggtgct gccgggcacc
      601 gacggcgcga ccgacctcgc cagcgcgacg gcgttcttca ggaagcacgc caagtcgggc
      661 atcgcgctca aagccatcgc cggcggcggc gggcggggca tgcggctgat caagtccgag
      721 ggcgaaatca ccgacgcctt cgcccgtgcc accgcggaag cgaagtcggc tttcggcaac
      781 ggcgatctct atgccgagcg gctggtcggc cgggcgcgcc acatcgaggt gcagatcgtg
      841 ggcgacggca agggcggcat cgtcgccctg ggcgagcgcg aatgcaccct gcagcggcgc
      901 agccagaaga tcgtcgagct ggcacccagc cccaacctca agccggcgct gcgaaagaag
      961 atcgtcgagg ccgcaatcgc catggccaag gccgtgaaat atcgcaacct cggcaccttc
     1021 gagttcctgg tcgacggaac ggagttcttt ttcatcgaag ccaacccgcg cctgcaggtc
     1081 gagcacaccg tcaccgagga agtgtggggt gtcgacctgg tgaaggcgca gctgctgctg
     1141 gcgggcggcg ccagcctggc caaggccggc cttgaagggg ccgcgccgcg cggccatgcc
     1201 atacagctcc gcatcaacat ggagacgatg acggcggacg gctcggccag gccgggcggc
     1261 ggcacgctca ccgtgttcga accgccgtcg gggcccggcg tgcgggtcga tacctacggc
     1321 tatgccggct accgcaccaa tcccaacttc gattcgctgc tcgccaagct gatcgtgcac
     1381 agcccgtcgg ccgattttgc cgatgcgctg gcgcgagccg aacgcgcgct cgccgccttt
     1441 cggctggaag gcgcgcccag caatatcgcc ttcctgcgcg ccctgctggc gcacggtgat
     1501 ttccgcgccg acaaggtcca cacccgcttc gtcgacgagc atgccaagat gctgatcgat
     1561 gcggcggcca aattgcagcc ggggctcttt ttccaggcag cgccgaccac ggccgtgcgg
     1621 caggccggtg cccgtgtcga cgcggtcgac ccgctggcgg tgctggcctt cggcaagacc
     1681 aaccagcagg cagccgccga gaccgcgacc gacgcgccgg aaggaaccgt ggctgtgccg
     1741 gcgcccatgc agggaacgat cgtcagcatt tccgtgaagg agggcgacgc ggtcgccgcg
     1801 ggccagccgc tgctgatcat ggatgccatg aagatgcagc acgagatccg cagtccggcg
     1861 cgcggctatg tgcggcggat cgcggtcgag gccggcgaga cgatctatga aggccatccg
     1921 ctgcttttcg tcgaggaggc cgatgtcgag gtcaaaggcg cggcggccga ggagaagatc
     1981 gacctcgacc atatccggcc cgacctggcc gaatatttcg agcgccgcgc gctcacgctc
     2041 gacgaccagc ggcccggcgc cgtggcgcgg cggcgcaaga ccaaccagcg caccgcgcgg
     2101 cagaacctcg acgacctggt cgatcccggc agtttcgtcg aatggggcgc cttcgccatc
     2161 gccagccagc gcacgcgccg caccgccgag gatttgatcg aaaagacccc ggccgacggg
     2221 ctcataaccg gcatcggccg ggtcaacggt tcgctgttcg gacccgagcg cagccgggtt
     2281 gccgtggcgc actacgatta caccgtgctg gccggcaccc agggcaagac caaccatcac
     2341 aagaaggacc gcctgttcga gatcgtcgaa gagcagcgca tcccgctggt cttcttcacc
     2401 gaaggcggcg gcggccggcc gggcgacgtc gacgtgcagt cggtggccgg gctgaacacc
     2461 atggcttttc acatcttcgg gcgtctcagt ggcgtgtcgc cgctggtcgg catcaactcg
     2521 ggccgctgct tcgccggcaa tgccgcgctg ctcggctgct gcgacgtggt gatcgcgacc
     2581 aagaactcgt cgatcggcat gggcggcccg gccatgatcg agggcggcaa tctcggcgtg
     2641 ttcgcgcccg aggaagtcgg cccgatgagc gtgcaggtgc ccaacggcac tgtcgacatc
     2701 gccgtcgagg acgaggccga ggcggtggcg gtggccaaga aatatctctc ctacttccag
     2761 ggcgcgctgc ccgagtggcg cgccgccgac cagcgcctgc tgcgccgggc catcccggaa
     2821 aataggctgc gcgtctacga cgtgcgcgac gtcatcgcca cgctctgcga cgagggctcg
     2881 ttgctcgagc tgcgccgcgc cttcgggccg ggcatggtga cggcgctcgt ccgcatcgag
     2941 ggcaagccgc tcggcatcgt cgccaacaat ccgatgcatc tcgcgggcgc catcgactcg
     3001 gacggctcgg acaaggccgc gcggttcctg cagctctgcg atgccttcga cctgccggtc
     3061 ctgttcctgt gcgacacgcc cggcatgatg gtgggacccg aggtcgagaa gaccgcgctg
     3121 gtgcgccatt gctcgcgcct gttcgtgacc ggcgccaacc tcggcgtgcc gttcggcacc
     3181 atcgtgctgc gcaaggccta cgggctgggc gcccaggcga tggccggcgg ctcgttccat
     3241 gccggcacct tcgccatctc ctggccgacc ggcgagttcg gcggcatggg actggagggc
     3301 gcggtcaagc tcggctaccg caaggagctc gaggcggtga ccgacccggc cgagcgccgt
     3361 gcgctgttcg acaagatggt ggcggcggcc tatgcccgcg gcaaggcgct cagcaccgcg
     3421 acctatttcg aggtcgacga ggtgatcgat cccgccgatt cccggcgctg gatcgcgacc
     3481 gccctgctcg acgccaagcc gcgcccgcgc aatgggcaca agaagcggcc gaatattgac
     3541 acctggtagt acggcgcggg agattctccg cgaatactgc tcccggggag tcggtccaat
     3601 gtccatcact gcctcggacc gatctgtaag ccgccggggt ttgctgggcg caacactcgt
     3661 ccttgtctcg ccgacctccg tcgccatcgc tcagcccgtg ccggtcctag gctacgtggc
     3721 tgccaagaac gccgatccaa agcgacttga agtcttcaag cagggcctga ccgagcttgg
     3781 ctacgtcgag ggcaagaata tccgaatcga atatcgagaa gccgtgctgg acgacgaata
     3841 tcgcggcgtc atggctgagt tggtggccgg caagatcgac atcattctgg ccgccaacgt
     3901 ggcggccgcg gttgccgccg ctaaatcgac cagcaccgtt cccatcgtca tgctggcggt
     3961 aaacgacccc gtcgggctgg gcttggtgaa gagcctggag cgtccgggaa cgaacgtgac
     4021 gggcacgacg atgtacgcgc cgcagttaat cggcgaacga ttgcgcatac tcgcgcgtct
     4081 ggtaaccaac ctcgacaaga tctcggtcgt cttgaatggc aacaacgcca acaacaccag
     4141 tcaactggaa ttggtccgtt cggagggccg cgcgctcggc atcgaggcgc agggcctgga
     4201 tattcgccgg cccgaggatg tcgcgcccgc cttcgacaaa gccgtcgctt tcggcgccaa
     4261 ggcgctcgtc aactgtgtcg acagcttcat caattcgcga cggttcgccc tcgcggccga
     4321 ggcggcgaaa cacaggctgc cggcgatcta taccgacgtg gaatatgtca
//
LOCUS       DASWGA010000059         3352 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_513243, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000059 DASWGA010000000
VERSION     DASWGA010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3352
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513243"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VF991_01240"
     CDS             <1..1035
                     /locus_tag="VF991_01240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555086.1"
                     /translation="EGRTSMDLPPGAEREFYATIGYLPLGDHAIRADMVERLAAMARQ
                     AVRESREAARRAQQQKKPPREAKPEAPAAPAAPSADEISEWAIVAAAFGETEPAREAA
                     PVVEEARPEETATAEPAPAAEETPTSAEAASEGPTPEEAKADEAKADEPKAQEPRNDG
                     PRPLPPGWFRAAPQMMSLVGCSEPEMANVLRGLGYRVHPPSDEHGPLYAFSMKPRFVR
                     EREEQRERQRQQQKQQRDQRRRERPERPNERQFFADTPRPERGQDRGKDERRRDVAGP
                     DGPPNKGAREGRPEADRPRDDRRGPRPPRRDSGGPALRLYATTEKKSDAPAADSPFAK
                     LLELKLGGKK"
     gene            1074..1328
                     /locus_tag="VF991_01245"
     CDS             1074..1328
                     /locus_tag="VF991_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEX9555087.1"
                     /translation="MRLDKWLWHARFFKSRSLAARYVEKSRCRIDGRVVDKPHAAVAP
                     GMVLTFALGPRVRVVRIVALGERRGPAAEARSLYDEIDGA"
     gene            1395..1730
                     /gene="fdxA"
                     /locus_tag="VF991_01250"
     CDS             1395..1730
                     /gene="fdxA"
                     /locus_tag="VF991_01250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HEX9555088.1"
                     /translation="MTYVVTEACIKCKYMDCVEVCPVDCFYEGENMLVINPDECIDCG
                     VCEPECPPNAILPDTEKGLEQWLELNRTMADGWPNITRKGEAPADAEVFKDEKDKFKK
                     YFSETPAKR"
     gene            2018..2545
                     /locus_tag="VF991_01255"
     CDS             2018..2545
                     /locus_tag="VF991_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HEX9555089.1"
                     /translation="MAKPKKTVAKAKEFAFEKGDFVVYPTHGVGRVIDIEAKEIAGHK
                     LDLFVISFEQERMMLRVPVAKAKISGLRKLSSRKIMENALVTLKGRSRVSRAMWNRRA
                     QEYEAKINSGDPVSIAEVVRDLHRNAGQPDQSYSERQIYEAALDRLARELAAVERIDK
                     ELATQKLNSVLQKVA"
     gene            complement(2632..>3352)
                     /locus_tag="VF991_01260"
     CDS             complement(2632..>3352)
                     /locus_tag="VF991_01260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555090.1"
                     /translation="PIERLAALQGIPQAAAAGETGRAVYLEAINGMSVDDAPQEGFVR
                     DNRFLHPLLKLAFEVPRDFRLFNDQDGVLGVGRDRSLLFFSCINEQVPGSLAEWMRDK
                     LKPTPTDIQPAQIDGVEAAIGAKLRGSDTGVGQMRYVMVRHGDQICYFNLLSEGPDRD
                     RRIAVLVDAARTFRTLSNTEAAALRPYRLRVISPAGATAQQLAARLPYSDFRIERLLV
                     LNGADSAADLVGRPQVKIIVP"
BASE COUNT          627 a         1088 c         1155 g          482 t
ORIGIN      
        1 gaggggcgca cctcgatgga cctgccgccc ggcgccgagc gcgagttcta cgccaccatc
       61 ggctacctgc cgctgggcga tcatgccatc cgcgccgaca tggtcgagcg cctggcggcg
      121 atggcacgcc aggccgtgcg cgagagccgt gaagccgcgc gccgcgcgca gcagcagaag
      181 aagccgccgc gcgaggccaa gcccgaggca ccggcggcgc ccgcagcgcc gtcggccgac
      241 gagatcagcg aatgggcgat cgtggcggcg gccttcggcg agaccgagcc ggcgcgcgag
      301 gccgcacccg tcgtcgagga agccaggccg gaggaaacag cgacggccga gccggcgccg
      361 gcggcggagg agaccccaac gtcggccgag gccgcatcgg aagggccgac gcctgaggag
      421 gcgaaagcgg acgaggcgaa agcggacgag ccgaaagcgc aagagccccg gaacgacggc
      481 ccgcggccgt tgccgcccgg ctggttccgt gcggcgccgc agatgatgtc gctggtcggc
      541 tgctcggaac ccgagatggc caacgttctg cgcggcctgg gctaccgggt ccatccgcca
      601 tcggacgagc atggcccgct ctatgccttc tcgatgaagc cgcgcttcgt gcgcgaacgc
      661 gaggagcaac gcgagcgcca acgccagcag cagaaacagc agcgcgatca gcgccgccgc
      721 gaacggcctg aacggccgaa cgagcggcag ttcttcgccg atacgccacg ccccgagcgc
      781 ggccaggatc gtggcaagga cgagcggcgt cgcgacgttg ccggccccga cggccccccg
      841 aacaaggggg cgcgcgaagg tcggcccgag gcggaccggc cgcgcgacga tcgccgcggg
      901 ccgcggccgc cgcgccgcga cagtggcgga ccggcgctgc ggctctatgc caccaccgag
      961 aaaaagagcg acgcgcccgc cgccgactcg ccgttcgcca agctgctcga gctgaagctc
     1021 ggcggaaaga aatagccgcc cggtgaggcg ccgagtggaa cgctaagggt gcgatgcggc
     1081 tcgacaagtg gctctggcac gcccgtttct tcaaatcccg cagcttggcc gcgcgctacg
     1141 tcgagaagtc gcggtgccgc atcgacggcc gcgtcgtcga caagccgcat gccgccgtgg
     1201 cgcccggcat ggtactgacc ttcgcgctgg ggccacgcgt gcgtgtggtg cgaatcgtgg
     1261 ccttgggcga gcgacgcgga ccggctgccg aagcgcgctc gttgtatgat gaaatcgacg
     1321 gtgcgtgatt cagcagtctt gcgccggccc gttcagcgcg ttaatcagcc gcccgctcgt
     1381 ctctggagcc gttgatgacc tatgtcgtga ccgaggcttg catcaagtgc aagtacatgg
     1441 actgcgtcga agtctgcccc gtggactgct tctacgaggg cgagaacatg ctggtcatca
     1501 atcccgacga gtgcatcgac tgcggcgtct gcgaacccga atgcccgccc aacgccatcc
     1561 tgcccgacac ggaaaagggt ctggagcagt ggctggagct caatcgcacc atggcggacg
     1621 gctggcccaa catcacccgc aagggcgagg cccccgccga cgccgaagtt ttcaaggatg
     1681 aaaaagacaa gttcaaaaag tatttcagcg aaaccccggc taaacgctag aatcggccgg
     1741 ttttcagtcc tttcacgcat ctttagcacg agacatgcaa cctccgcatg ggcgcagcgt
     1801 tgccgaaatg caacataggt cgcgactccc ggccgaaatt ctgttataag ggcgtcgctg
     1861 gcagcggtcc ggggtccggt ccgccactgg ctcggtgtcc aagtcggtag ccgaaagcaa
     1921 cttaccgata ccggacatcg ggctgagcgc gcaggggagc gtgcgtggcg ggtcgcggta
     1981 tcgctgcaac gcggggttgg atgtgaaggg acttgatatg gccaagccga agaagacagt
     2041 ggccaaggcg aaggaattcg ccttcgagaa gggcgatttc gtggtctatc cgacccatgg
     2101 cgtcggtcgc gtgatcgaca tcgaggcgaa ggagattgcc ggccacaagc tcgatctgtt
     2161 cgtcatctcc ttcgagcagg agcgcatgat gctgcgcgtg ccggtggcga aggcgaagat
     2221 ctctggtctg cgcaagcttt cctcgcgcaa gatcatggag aatgcgctgg tgacgctgaa
     2281 gggccgcagc cgggtcagcc gcgccatgtg gaaccgccgc gcccaggagt acgaagccaa
     2341 gatcaactcc ggcgatccgg tgtcgatcgc cgaagtcgtg cgcgacctgc accgcaatgc
     2401 cggccagccc gaccagtcct acagcgagcg tcagatctac gaagcggcgc tcgatcggct
     2461 ggcgcgcgag ctggccgcgg tcgagcgcat cgacaaggaa ctcgccacgc agaagctgaa
     2521 cagcgtgctg caaaaagtcg cctgaccgct ggcgcaatca attaaaaggc ggccgatgaa
     2581 agtcggccgc tttttcatgt ccggtgtcat cgcgagcgca gcaccattgc tctacggcac
     2641 gatgatcttc acctgcggcc ggccgacgag gtcggcggcg ctgtcggcgc cgttcaggac
     2701 gagcagccgt tcgatcctga aatcgctata gggcaggcgc gcggcgagct gctgggcggt
     2761 ggcgccggcg ggcgaaatca cgcgcaggcg atagggacgc agggcagccg cctcggtgtt
     2821 cgacagggtg cggaacgtgc gcgccgcatc gaccagcacg gcgatccgcc gatcacggtc
     2881 ggggccttcg ctcagaagat tgaagtaaca gatctgatcg ccgtgccgca ccatcacgta
     2941 tcgcatctgg ccgacgcccg tgtcggagcc gcgcagcttg gcgccgatcg ccgcttcgac
     3001 gccgtcgatt tgggccggct ggatgtcggt cggcgtcggc ttcagcttgt cgcgcatcca
     3061 ttcggccagc gagcccggca cctgctcgtt gatgcaggag aagaacaaaa gagaacggtc
     3121 gcgcccgacg cccagcacgc cgtcctggtc gttgaacagg cggaaatcgc gcggcacctc
     3181 gaaggcgagc ttgagcagcg gatgaaggaa cctgttgtcg cgcacgaagc cttcctgcgg
     3241 cgcatcgtcg accgacatgc cgttgatcgc ctcgagatag acggcacggc cggtctctcc
     3301 ggccgccgcc gcctgaggga tcccctgcaa ggcggccagg cgttcgatcg gc
//
LOCUS       DASWGA010000060         4546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2412016, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000060 DASWGA010000000
VERSION     DASWGA010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4546
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2412016"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..713)
                     /locus_tag="VF991_01265"
     CDS             complement(<1..713)
                     /locus_tag="VF991_01265"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9555091.1"
                     /translation="MADGLKVRFWGVRGSISCSGAEYARYGGNTSCLEVTGGGRRLIF
                     DAGTGIRPLGLDLARQAPVDIDIYFTHTHLDHISGLTFFAPLFGKENSVRLWAGHLEA
                     PYTLKKVVSNLMAAPLYPVSLEVFQARVAFKEFKSGQPLACGEMAMHTAPLNHPNGAT
                     GYRVEFRGKSICYITDTEHRGGGPDKTIVELCRGADLMIYDSSYTDAEYPRYRGWGHS
                     TWQEGTRVADAAGVGTLVV"
     gene            994..1317
                     /gene="hspQ"
                     /locus_tag="VF991_01270"
     CDS             994..1317
                     /gene="hspQ"
                     /locus_tag="VF991_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018427972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HEX9555092.1"
                     /translation="MRKAKFAIGQVVKHRIYPFRGVIFDVDPVFANTEEWLASIPEEV
                     RPRRDQPFYHLLAENAQTTYVAYVSEQNLLPDDTGKPVSHPQVPHFFKEMRRGHYVSR
                     GRALH"
     gene            complement(1377..2213)
                     /locus_tag="VF991_01275"
     CDS             complement(1377..2213)
                     /locus_tag="VF991_01275"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9555093.1"
                     /translation="MRLVVFLMVLVMAGMALAQQPQPPRPPAKPAPAPARPAGKPVFP
                     PPAFKITVATEAAYPPFNYLDRKGMPAGFEMELAQEACQRIKAECEFAAFKWDDLIPG
                     LIDKKFDIIMSSLEVTSERRKRMGLSRRYYLSPGAFIAAKGAPFDGPPSLLRNKRIGV
                     QRDSTHADWADKSFRRSAQLKRYNTVAEALAGLASDEVDAVFGDKTQLWLWSQKPEGK
                     CCELVGQDIKDNQTLGIGVAAGLRKEDARLRDALNKAFAEMIGDGTYKKINEKYFPFP
                     LN"
     gene            complement(2210..3370)
                     /gene="hemW"
                     /locus_tag="VF991_01280"
     CDS             complement(2210..3370)
                     /gene="hemW"
                     /locus_tag="VF991_01280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEX9555094.1"
                     /translation="MTPPIGPLGVYVHWPFCKAKCPYCDFNSHVRQGIDQERWRNALL
                     KELEHAAREAPERRVETIFFGGGTPSLMEPATAGAVIARVKALWDTAAELEITLEANP
                     TSVEAGRFAALAETGVNRVSLGVQAFDRSALGFLGREHSVDEAIAAIDTARRHFGRYS
                     FDLIYARPGQTAEAWEAELDHALALAGEHLSLYQLTIERGTRFFTDHARGAFILPTEE
                     QAAEMFELTQTRLAAAGLPAYEISNHARPGAACRHNLIYWRYQDYVGIGPGAHGRFAE
                     ASGKRATRRASGPEAWLAAIERAGHGTAETSLIVGRDLVEEALMMGLRLADGIDRTQF
                     ACTTGADPVTALGEARLGPLVAAGYLEVDATHLKATAAGRQRLNAVLKHLIA"
     gene            complement(3367..3981)
                     /gene="rdgB"
                     /locus_tag="VF991_01285"
     CDS             complement(3367..3981)
                     /gene="rdgB"
                     /locus_tag="VF991_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEX9555095.1"
                     /translation="MARRFACPKLVVATHNRGKAGEIRALLSAFGVEIVSAADLGLPA
                     PEETGKTFEENATIKALAATRASGLPALADDSGLSVAALGGEPGLHTADWEGPTRDAM
                     VGMRRIQDEFAARAVPDTDAARAATFHCVLALAWPDQHVETVHGSLDGRIVWPPRGDN
                     GHGYDPCFQPAGDTRTTAQMSDAEKNAISHRGRAFRRLVEACFG"
     gene            complement(3981..>4546)
                     /gene="rph"
                     /locus_tag="VF991_01290"
     CDS             complement(3981..>4546)
                     /gene="rph"
                     /locus_tag="VF991_01290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEX9555096.1"
                     /translation="NTGRGWVTAEYGMLPRSTHTRTDREAARGRQSGRTQEIQRLIGR
                     ALRAVVNLPAMGERQINIDCDVLQADGGTRTASITGSWVALHFAFERLIKEGKLAASP
                     MTGQVAAVSCGLWEGTPVLDLDYPEDSKAQADANFVLTGDGGIVEVQGTAEEKPFTEV
                     QFLNLLELAKKGVGELARLQRLAIGKS"
BASE COUNT          739 a         1479 c         1555 g          773 t
ORIGIN      
        1 aagacgacga gcgtgccgac gcccgcggcg tcggccacgc gcgtgccctc ctgccaggtc
       61 gaatggcccc agccgcgata gcgcggatac tcggcgtcgg tgtagctcga atcgtagatc
      121 atcaggtcgg cgccgcgaca cagctcgaca atggtcttgt cggggccgcc gccgcgatgc
      181 tcggtatcgg tgatgtagca aatcgacttg ccgcggaatt cgacgcgata cccggtggcg
      241 ccattgggat gattgagcgg cgcggtatgc atggccattt cgccgcaggc gagcggctgg
      301 ccgctcttga actccttgaa cgcgaccctc gcctggaaga cttccagcga caccggatag
      361 agcggtgccg ccatcaggtt gctgacgacc ttcttcagcg tgtacggcgc ctcgaggtgg
      421 cccgcccaca agcgcaccga attttccttg ccgaacaagg gggcgaagaa ggtcagtccc
      481 gaaatatgat cgaggtgcgt gtgagtgaaa taaatgtcga tatcgaccgg cgcctggcgc
      541 gcgagatcga ggcccagagg ccggatgccg gtgcctgcgt cgaaaatgag gcgacggcct
      601 ccgccggtaa cctccagaca ggaggtattg ccgccatagc gcgcatattc ggctccggag
      661 caggagatcg aaccccgtac gccccagaac cggactttta gaccatcggc caatggtaag
      721 ttcccacgta ccctcaggcc gcacagtcca cgggccggcc gctcgcgtca accgatggcg
      781 ctggcggtgc cgggcgccgc aattctggcc gcgtttttgc gtacggattt tgcgtacata
      841 tacggtacag ccaaggcgca gatttccacg tattcttgca tgtcatccgt gaattcgccg
      901 atccgccgcg ttgcctgctt gtctgttcgg agtaatactt ctgccatgga actcgaaaac
      961 caagttgccg agtccgcgat cctccagccg cccatgcgca aggcaaagtt cgccatcggg
     1021 caggtggtga agcatcgcat ctacccgttt cggggcgtca ttttcgacgt cgatccggtg
     1081 tttgccaaca ccgaggagtg gctggcctcg attcccgaag aggtccgccc gcgacgcgat
     1141 cagccgttct atcacctgct cgccgaaaac gcgcagacca cctacgtcgc ctacgtctcg
     1201 gagcagaacc tgctgcccga cgacaccggc aagccggtat cgcacccgca ggtcccgcat
     1261 ttcttcaagg aaatgaggcg cggccactac gtctcgcgcg gccgcgcgct gcactagggc
     1321 tgcgcaagta acagacgaac tgaagtcgtt acgccacaac tgtcatcccg agcgctttag
     1381 ttcagcggga acggaaaata cttctcgttg atcttcttat acgtgccgtc gccgatcatc
     1441 tcggcgaagg ccttgttcag cgcgtcgcgc agcctggcgt cttccttgcg taagccggcg
     1501 gcgacgccga tgccgagcgt ctggttgtcc ttgatgtcct gaccgaccag ctcgcagcat
     1561 ttgccttcgg gcttctggct ccacagccag agctgggtct tgtcgccgaa caccgcgtcg
     1621 acctcgtcgc tggccaagcc cgccagcgcc tcggcgacgg tgttgtagcg cttgagctgg
     1681 gcggagcggc ggaagctctt gtcggcccag tcggcgtggg tcgaatcgcg ctgcacgccg
     1741 atccgcttgt tgcgcagcag cgagggcggc ccgtcgaacg gcgcgccctt ggcggcgatg
     1801 aaggcgccgg gtgagaggta gtagcggcgc gacaggccca tgcgcttgcg ccgctcgctg
     1861 gtcacttcca gcgacgacat gatgatgtcg aacttcttgt cgatcaggcc cgggatcagg
     1921 tcgtcccact tgaaggcggc gaactcgcac tccgccttga tgcgctggca ggcctcctgc
     1981 gccagctcca tctcgaagcc ggccggcatg cccttgcggt cgaggtagtt gaacggcgga
     2041 taggccgcct cggtggccac cgtgatcttg aaggcaggcg gcggaaagac gggcttgccg
     2101 gcggggcggg ccggggccgg tgcgggcttg gccggcggcc gcggcggttg gggctgttgg
     2161 gcgagcgcca tgccggccat cacgagcacc atcagaaaga ccaccaatct catgcgatca
     2221 ggtgttttag cacggcgttg aggcgctggc ggccggccgc cgtggccttg agatgcgtgg
     2281 cgtcgacttc gaggtagccc gcggcgacca gcgggccgag gcgggcctcg ccgagggcgg
     2341 tcacgggatc ggccccggtc gtgcaggcga actgcgtccg gtcgattccg tcggccagcc
     2401 gcagtcccat catcaaagcc tcctcgacca ggtcgcggcc gacgatcagc gacgtctccg
     2461 ccgtgccgtg gcctgcgcgt tcgatggcgg cgagccatgc ttccggcccg ctcgcccgcc
     2521 gagtcgcgcg tttgccggac gcctcggcga agcggccatg ggcgcccggc ccgatgccga
     2581 cgtaatcctg gtaccgccaa tagatcaaat tgtggcggca ggcagctccc ggccgggcat
     2641 ggttggagat ttcgtacgcc ggcaggccgg ccgccgcgag ccgcgtctgg gtcagctcga
     2701 acatttcggc ggcctgctct tcggtcggca ggatgaaggc gccgcgggca tggtcggtga
     2761 agaagcgcgt gccacgctcg atggtgagct ggtagagcga cagatgctcg cccgcgagtg
     2821 ccagggcgtg gtccagctca gcctcccagg cctcggcggt ctggccggga cgggcataga
     2881 tcaggtcgaa ggaatagcgc ccaaaatggc ggcgcgcggt gtcgatggcg gcgattgcct
     2941 cgtcgacgga atgttcgcga ccgagaaagc cgagcgccga acggtcgaaa gcctgcacgc
     3001 ccagcgagac gcggttgacg ccggtttcag ccaacgcggc aaagcggccg gcctcgaccg
     3061 aggtcggatt ggcttcgagc gtgatttcga gctcggcggc ggtatcccac aacgccttga
     3121 cgcgcgcgat caccgcgccc gcggtcgcgg gctccatcag cgacggcgtg ccgccgccaa
     3181 aaaagatcgt ctcgacccgg cgttccggcg cttcgcgcgc ggcgtgctcc agttctttca
     3241 gcagggcgtt gcgccagcgc tcctggtcga tgccttggcg cacatgggaa ttgaaatcgc
     3301 agtaagggca cttcgccttg cagaaaggcc aatgaacata gacgcccaag ggcccgatcg
     3361 gcggcgtcat ccgaagcacg cctcgaccag ccggcggaag gcgcggccgc gatggctgat
     3421 ggcgttcttc tccgcgtccg acatttgcgc cgtggtgcgc gtgtcgcccg cgggctggaa
     3481 acagggatcg tagccgtggc cgttgtcgcc gcgcggcggc cagacgatgc ggccgtcgag
     3541 cgagccgtgc accgtttcga catgctggtc gggccaggcg agtgccagca cgcaatggaa
     3601 ggtggcggcg cgggcggcgt cggtgtccgg cactgcgcgg gccgcgaact cgtcctggat
     3661 gcggcgcatg ccgaccatgg cgtcgcgcgt cgggccttcc cagtcggcgg tatggaggcc
     3721 gggctcgccg ccgagcgccg ccacgctcaa gccggaatcg tcggcgaggg cgggcaggcc
     3781 gctggcacga gtggcagcca gcgctttgat cgtggcgttt tcctcgaagg tcttgccggt
     3841 ctcttccggc gccggcaggc caaggtcggc ggccgagacg atctcgacgc cgaaagccga
     3901 gagaagcgcg cgaatctcgc ccgccttgcc acggttgtgg gtcgccacga ccagcttggg
     3961 gcaagcgaag cgccgcgcca tcaggacttg ccgatcgcca gccgctgcag gcgcgccagc
     4021 tcgccgacgc ctttcttggc gagctcgagc aggttcagga actgcacctc ggtgaagggc
     4081 ttttcttcgg cggtgccttg gacctcgacg ataccgccgt cgccggtcag cacgaagttc
     4141 gcgtcggcct gggccttgga atcctccgga tagtcgaggt cgagcaccgg ggtgccctcc
     4201 cacaggccgc acgaaacggc cgccacctgg ccggtcatcg gggaagcggc aagcttgccc
     4261 tccttgatca ggcgctcgaa ggcgaaatgg agcgccaccc aggaaccggt gatgctggcg
     4321 gtgcgggtgc cgccgtcagc ctgcagcacg tcgcagtcga tgttgatctg gcgctcgccc
     4381 atggccggca gattgacgac ggcgcgcaac gcgcggccga tcaggcgctg gatttcctgg
     4441 gtgcggcccg actgccggcc gcgcgcggcc tcacggtcgg tgcgggtatg ggtcgagcgc
     4501 ggcagcatgc cgtattcggc ggtgacccag ccgcggccgg tattac
//
LOCUS       DASWGA010000061         7054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_260494, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000061 DASWGA010000000
VERSION     DASWGA010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7054
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260494"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1002
                     /locus_tag="VF991_01295"
     CDS             <1..1002
                     /locus_tag="VF991_01295"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9555097.1"
                     /translation="RVNSLRPNPANGHALMTLKTADIDLAGPVASEARLAPRRRAGIL
                     ARESRSAYAFITPAFCLLAFLVAYPFVLSVWFSLSDARIGTAGTFVGLDNFGRLFSSS
                     IFLQTLQNSFVFTAAALTCKIVFGMVLALLLFRVTRFKRLIRGAVLLPFIVPTALSTL
                     VWWWMFEPLYSVVNWTLKTLHVVDHDLPWLPDPYLAMFVVILVNVWRGLPFFAITLLA
                     GLVAIPRELYEAAEADGAGPIRRFWHITLPLVTPVLGVVILFSAIFTLSDFNIVYVLT
                     KGGPMNMTHLFATYSFTLGLQGGEIGMGAAVSLFLFPILLAVVFLQLRLMRKAAIYE"
     gene            995..1879
                     /locus_tag="VF991_01300"
     CDS             995..1879
                     /locus_tag="VF991_01300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9555098.1"
                     /translation="MSSALAISRTRTTRARRRRAISPIFTVYLPVLPYILFALFPLYF
                     MLVTSFKSNSELYDRGSVPFWISDGATMSHYQLLSAETPFWQWFANSLIVSVSATVIS
                     VVLGVLAAYPLARMRFPGSDSFGVAVFITYLVPPTLLFLPLTSVVNWLGLSDTLWALI
                     LTYPTFLVPFCTWLLMGYFRTVPKEIEECAMLDGCNRLQSMLRILLPAAVPGLICAAL
                     FAFTLSWNEFLYALVFVSPAELKTMTVGVFSELIRGDIYYWGALMAGACIGSIPIVIA
                     YVFFLDYYVSGLTSGAIK"
     gene            1941..3266
                     /locus_tag="VF991_01305"
     CDS             1941..3266
                     /locus_tag="VF991_01305"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9555099.1"
                     /translation="MTTSVYPRRQRRRQFLRNAAGGAAGLAGVLASPAIAQTRELTFL
                     TIASFVPDTDKELKRQLEEWGKQNNVKTRLDIIAHLQLQTKKAAEVQAKSGHDLTALG
                     PGLGDADLYFDYLVDLADLAKEVGAKNGGWLKPDDYLIRGKWTLLPWWQPPFPMAIRT
                     DLMKQIGETAVPDTWEDWLRIGKKGKAIGHPFGTAIGHSGDANVTLLSILWSYGGTYV
                     AKDGETVTINSPQTREAMEFVKRLYNEAMDPEVVAWDDASNNRCLNAGKCIAIHNPIS
                     AFESAKKDNVVVPGTKQPIAEVIDHINTPRGPKGRFATTGFWCVGIWNFSKNVALAKD
                     FLSFHFQPDNQAKWVDAGHGFNMPFLNNLIGHPVYKSDPQYRNIPDVAKVTVPPSWPG
                     PVTAASQQVWDLYILPDMFAQYATGRMTLDQAVAWGEKEIIEIYRKRKG"
     gene            complement(3614..3835)
                     /locus_tag="VF991_01310"
     CDS             complement(3614..3835)
                     /locus_tag="VF991_01310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555100.1"
                     /translation="MSPDPRTRCAQLVAFWQLHGGSKSEGSGGADIARKSAEVDCGAG
                     RYERGIRTMEDLLRRNGYTVPSSSPGSGG"
     gene            complement(3973..5088)
                     /locus_tag="VF991_01315"
     CDS             complement(3973..5088)
                     /locus_tag="VF991_01315"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9555101.1"
                     /translation="MIIDCHAHVFAHWIGACGHPTRDVHNRYLQRMITRTAASTFRTR
                     DRARADTKALYRADDAGWSGLTDVDFRVGRFGQLEFTHAGEDHVIQYMPVGMQEMAAP
                     PELMLAQMMYAGVDHCLLQAGGAYGAMTEMNAFAQRQYPDRMTGLMHVDEAMAGSEPE
                     LAKVDHALGALQLRGLYFNVDSMSRHGFPWPLDAPEMAPFWEKLARLGIVLCLELSAG
                     PSYDKAGYMGHIAALGRILARHRDLRLHLAMSPPVAFFASHRRYAFPEELLAVYRHEP
                     LVLEVTFPITYGGVWDYPYPEAQALIESLRDQLGASRLVWGSDMPNVERFCTYKQSLD
                     YVRKYCPFLTAREKDLVLGDNCAAFYGIGKRRASGEG"
     gene            complement(5085..5927)
                     /locus_tag="VF991_01320"
     CDS             complement(5085..5927)
                     /locus_tag="VF991_01320"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX9555102.1"
                     /translation="MRIGVTMFATDYAIPPHELAAEAEARGFESVWFPEHSHIPTSRK
                     SPWPGGAELPKWYYDSYDPFVAMGAAAVVTKTIKLGTGVCLVVQRDPIHTAKEVATVD
                     RLSNGRLLFGVGGGWNAEEMADHGTAFGTRFKLMRERIEAMKEIWAHSKPKYAGELVK
                     FDEMMQWPKPVQKPHPPIIVGGGFPQGARRAVAYADGWMPIGGRGGDTLAMLPPFREM
                     LKAAGRPASQVPVTLFGVGMNGEGLKRARDAGVERVVFGIPAEARDKVLPLLDKAAAL
                     MRDA"
     gene            complement(6125..6445)
                     /locus_tag="VF991_01325"
     CDS             complement(6125..6445)
                     /locus_tag="VF991_01325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555103.1"
                     /translation="MIRLTVIPRLRENLLRLLVAKEVELRRKGRGTLHRSGPKKRGHE
                     KWTHTTYPGWINLQRSVDGTLAATVHSRAADDEWKLLTSLIGFLDRHFRSEIASVTIN
                     YDRS"
     gene            complement(6498..6926)
                     /locus_tag="VF991_01330"
     CDS             complement(6498..6926)
                     /locus_tag="VF991_01330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555104.1"
                     /translation="MADIVAFNQANADKALRFGQDLFLAAQATRGDLSELEYRSARAM
                     DLQSAKERGLDAYMTQHKLDAVVFPGTAGASIAAKAGYPSVLVPAGFIGGVEGKETPD
                     FPLGLTFAGRAWSEAKLLRLAYAYEQAATARRPPTGLPAL"
BASE COUNT         1116 a         2422 c         2264 g         1252 t
ORIGIN      
        1 cgcgtaaata gcttgcgtcc aaacccggcg aacgggcacg cgctgatgac gctgaaaacc
       61 gcggatatcg atctggccgg gcccgtcgcg agcgaggcgc ggctggcgcc gcgccgccgg
      121 gcgggcatcc tggcgcgtga gtcgcggtct gcctacgcct tcatcacgcc cgcgttctgc
      181 ttgctcgcgt tcctggtcgc ctatccgttc gtgctttcgg tgtggttcag cctgagcgac
      241 gcgcggatcg gcacggccgg caccttcgtc gggctcgaca acttcgggcg cctgttctcg
      301 agctcgatct tcctgcagac gctgcagaac tccttcgtgt tcacggcagc ggcgctcacc
      361 tgcaagatcg tcttcggcat ggtgctggcc ctgctgctgt tccgcgtcac gcgcttcaag
      421 cgcctgattc gcggcgccgt gctgctgccg ttcatcgtac ccaccgcgct cagcacgctg
      481 gtctggtggt ggatgttcga gccgctctac agcgtggtga actggacatt gaagaccctg
      541 cacgtggtcg atcacgatct gccgtggctg cccgacccgt acctggcgat gttcgtggtg
      601 atcctggtca atgtctggcg cggcctgccg ttcttcgcca tcaccttgct ggccggcctg
      661 gtggcgatcc cgcgcgagct ctacgaagcg gcggaagccg acggcgccgg gccgatcagg
      721 cgcttctggc acatcaccct gcccctggtg acgcccgtgc tgggcgtggt gatcctgttc
      781 tcggcgattt tcaccctgtc ggacttcaac atcgtctacg tcctgaccaa gggcgggccg
      841 atgaacatga cgcacctgtt cgccacctac tccttcaccc tgggcctgca gggcggcgag
      901 atcgggatgg gcgccgccgt ctcgctgttc ctgttcccga tcctgctggc cgtggtgttc
      961 ctccagctgc gcctgatgcg caaggcggcg atctatgagt agcgccctcg cgatcagccg
     1021 gacgaggacg acgagagcgc gccgaaggcg cgccatcagc ccgatcttca ccgtctacct
     1081 gccggtgctg ccctacatcc tgttcgcgct cttcccgctc tatttcatgc tggtgacctc
     1141 gttcaagagc aactcggagc tctacgacag gggctccgtc ccgttctgga tctcggacgg
     1201 ggcgaccatg agccactacc agctgctgtc ggcggagacg ccgttctggc agtggttcgc
     1261 caacagcctc atcgtcagcg tgtcggcgac ggtgatctcg gtcgtcctgg gcgtgctcgc
     1321 cgcctatcct ctggcgcgga tgcgcttccc ggggtccgac tccttcggcg tcgccgtctt
     1381 catcacctac ctggtgccgc cgaccttgct cttcctgccg ctgacctcgg tcgtgaactg
     1441 gctcgggctg tccgacaccc tgtgggcgct gatcctgacc tacccgacct tcctggtgcc
     1501 gttctgcacc tggctgctga tgggctactt ccgcaccgtg ccgaaggaaa tcgaggaatg
     1561 cgccatgctc gacggctgca accgcctgca gagcatgctg cgcatcctgc tgcctgccgc
     1621 ggtgccgggc ctgatctgcg ccgcgctctt cgccttcacg ctgtcgtgga acgagttcct
     1681 ctacgcgctg gtgttcgtct cgccggccga gctcaagacc atgaccgtcg gcgtcttctc
     1741 cgagctcatt cgcggcgaca tctactactg gggcgcgctc atggccgggg cctgcatcgg
     1801 ctcgatcccg atcgtgatcg cgtatgtgtt cttcctcgac tactacgtct ccggcctgac
     1861 ctccggagcc atcaagtagc gcaagcaatc atgcgggccg gcgcagcact ccggtcccgc
     1921 caacacaggg aggcaacgac atgacgacat ccgtctatcc gcgccggcag cgccgccggc
     1981 agttcctgcg caacgcagcc ggcggtgccg ccggtcttgc cggcgtgctc gcctcgccgg
     2041 ccattgcgca gacccgcgag ctcacctttc tcaccatcgc cagcttcgtg ccggataccg
     2101 acaaggagct gaagcggcag ctcgaggaat ggggcaagca gaacaacgtc aagacccggc
     2161 tcgacatcat cgcgcacctc cagctgcaga ccaagaaagc cgccgaggtg caggcgaagt
     2221 ccggccacga tctgaccgcg ctcggcccgg gcctgggcga cgccgacctc tatttcgact
     2281 acctcgtcga cctcgccgac ctcgccaaag aggtcggggc gaagaacggc ggctggctca
     2341 agcccgacga ctacctgatt cgcggcaagt ggacgctgct gccgtggtgg cagccgccct
     2401 tcccgatggc gatccgcacc gacctgatga agcagatcgg cgagacggcg gttcccgaca
     2461 cctgggagga ctggctgcgc atcggcaaga agggcaaggc catcggccat ccgttcggca
     2521 ccgcgatagg ccacagcggc gacgccaacg tgaccctgct gtcgatcctg tggtcctacg
     2581 gcggaaccta cgttgccaag gacggcgaga ccgtgacgat caactcgccg cagacccgcg
     2641 aggcgatgga gttcgtgaag cggctctaca acgaggcgat ggaccccgag gtcgtggcct
     2701 gggacgacgc cagcaacaac cgctgtctca acgccggcaa gtgcatcgcc atccacaacc
     2761 cgatcagcgc cttcgaatcg gcgaagaagg acaacgtagt cgtgcccggc accaagcagc
     2821 cgatcgccga ggtgatcgac cacatcaata cgccgcgcgg gcccaagggc cgcttcgcga
     2881 cgaccggatt ctggtgtgtc ggcatctgga acttctcgaa gaacgtcgcg ctggccaagg
     2941 acttcctgag cttccatttc cagcccgaca accaggccaa atgggtggac gccggccacg
     3001 gcttcaacat gccgttcctc aacaacctca ttggccatcc ggtctacaag agcgatcccc
     3061 agtaccggaa catccccgac gtcgccaagg tcacggtgcc gccctcgtgg cccggccccg
     3121 tcaccgccgc ctcgcagcag gtctgggacc tctacatcct ccccgacatg ttcgcgcagt
     3181 acgcgaccgg ccgcatgacc ctggaccagg cggtcgcctg gggcgaaaag gagatcattg
     3241 agatctaccg caagcggaag ggctgacgcc ggttgggcgc gcgcgcacat cctgagcctg
     3301 ccaaagggtc cagtggcgca cgacgcaggg tggctcgatg gccgccctgc gtcgattctt
     3361 cccatccgtg aggccgccct ccgccgacgc tccgcgcctc cttcgtcccg tagcctatag
     3421 cctcgcggcg ccgtcgacga tgggttggcg cgcagcgcca tacattctcc tcgcgaccgc
     3481 ccttctcgtc gtctggagca tcgcttggcg gcgccatctg ggccgcgaat ggaagcttga
     3541 acagtcggcg gcgcccagtt cggcacgatg ggcgaagcca tgagggcttg aacgaagact
     3601 caagcgagat acgtcagccg ccgctccccg gactggacga cggcacggtg tagccattgc
     3661 gccgcagcag gtcttccatc gtccggatgc ccctttcgta gcgaccggcc ccgcaatcga
     3721 cttcggcgct cttgcgcgcg atgtcggcgc cgccgctgcc ctcgctcttg ctgccgccat
     3781 ggagctgcca gaacgcgacg agttgtgcgc agcgcgttct ggggtcgggg ctcaatgtcc
     3841 cctgtgccac ggtttgggcg acagcagcgc tcgcgatggc cggcaacaag aaggagagga
     3901 tggccgcaac gttcgtcctc gaatttccca tcgcgtcctc cgccgtgttg gacggttgtt
     3961 cgttcccgct ccctacccct cacccgatgc gcgccgcttg ccgatcccgt aaaacgccgc
     4021 gcagttgtcg cccaggacaa gatccttctc ccgcgccgtc aggaacgggc agtatttccg
     4081 cacgtagtcg agcgattgct tgtaggtgca aaagcgctcg acgttcggca tgtcggaacc
     4141 ccacaccagc cggctcgcac ccaactggtc gcgcaggctt tcgatcagcg cctgcgcctc
     4201 gggataggga tagtcccaga cgccgccgta ggtgatcgga aaggtgacct cgagcaccaa
     4261 cggctcgtgg cggtagacgg ccaaaagctc ctcggggaac gcgtagcggc ggtggctcgc
     4321 gaagaaggca accggcgggc tcatcgccag gtggaggcgg agatcgcgat ggcgcgccag
     4381 tatccggccg agcgccgcga tatggcccat gtagcctgcc ttgtcgtagc tgggacccgc
     4441 gctcagctcg aggcagagca cgatgcccag gcgagccagc ttctcccaga acggcgccat
     4501 ctccggcgcg tcgaggggcc agggaaagcc gtgccggctc atcgaatcga cgttgaagta
     4561 gagaccccgg agctgcagtg cgcccaaggc atggtcgacc ttggcgagct cgggctcgct
     4621 gcccgccatc gcctcgtcga catgcatcag cccggtcatg cggtcggggt actgacgctg
     4681 ggcgaaggcg ttcatctccg tcatcgcccc gtaggcgccg cccgcctgca gcaggcagtg
     4741 atcgacgccg gcatacatca tctgcgccag catcagctcc ggcggcgccg ccatctcctg
     4801 catgccgacc ggcatgtact ggatgacgtg gtcctcgccc gcgtgggtga actcgagctg
     4861 gccgaagcgg ccgacccgga aatcgacgtc ggtgagcccg ctccagcccg catcgtcggc
     4921 gcggtagaga gccttggtgt cggcgcgcgc ccggtcgcgt gtgcggaagg tcgaggccgc
     4981 cgtccgcgtg atcatgcgct gcaggtagcg gttatggaca tcgcgcgtcg gatgtccgca
     5041 ggcgccgatc cagtgcgcga agacatgggc gtggcagtcg atgatcatgc gtcgcgcatc
     5101 agcgcggccg ccttgtcgag cagcggcagg accttgtccc tggcttcggc ggggatgccg
     5161 aagacgacgc gctcgacgcc ggcgtcgcgg gcgcgcttca gcccctcgcc gttcatgccg
     5221 acgccgaaca gcgtcaccgg cacttgggac gcgggccgcc cggccgcctt cagcatctcg
     5281 cgaaacggcg gcagcatcgc cagcgtgtcg ccgcctcggc cgccgatcgg catccaaccg
     5341 tcggcgtagg cgacggcgcg gcgcgcgccc tgcgggaagc cgccgccgac gatgatcggc
     5401 ggatgcggct tctgcaccgg cttgggccac tgcatcatct cgtcgaactt gacgagctcg
     5461 ccggcatatt tcggcttcga gtgcgcccag atctctttca tcgcctcgat gcgctcgcgc
     5521 atcagcttga agcgcgtgcc gaacgccgtg ccgtggtcgg ccatctcctc ggcattccag
     5581 ccgccgccga cgccgaacaa cagccggccg ttggacagcc ggtcgacggt ggcgacctcc
     5641 ttggcggtat ggatgggatc gcgctgcacc accaggcaga caccggtgcc cagcttgatg
     5701 gtcttggtga ccaccgcggc ggcgcccatg gcgacgaagg gatcgtagga gtcgtagtac
     5761 catttcggca gctcggcgcc gcccggccag ggcgacttgc ggctggtcgg gatgtggctg
     5821 tgctcgggaa accagaccga ttcgaagccg cgcgcttcgg cctcggcggc gagctcatgc
     5881 ggcgggatcg catagtccgt ggcaaacatc gtgacgccga tccgcatggg ccatcctccc
     5941 tcgttcccca ggctcgttat cgggacagcg tagccgattt tgccagggac cggggaggtg
     6001 tgtcctcggc gacgggccgc cgtgcatccg gcggcgctct ctgcggctgc ttctggcgtg
     6061 cggatgaact cagggacgtt gtccggcgcg ccgttctccc cggtctagag cccctagatc
     6121 attctcatga tcgatcgtag ttgatcgtca ccgaagcgat ctcgctacga aaatgacggt
     6181 cgagaaaacc aatcagggaa gtaagcagct tccattcgtc atctgctgcc cttgaatgca
     6241 ctgtggccgc gagcgtgccg tcgacggagc gctgcaggtt gatccaaccc gggtaggtcg
     6301 tgtgagtcca cttctcgtgg ccacgcttct tcggacccga ccggtggagg gtgccccggc
     6361 ctttgcgacg cagctcaacc tccttggcaa ccagaagccg gagtaggttt tcgcgaagcc
     6421 gggggatcac cgtcagtcga atcatgctgt atctccctcc tgcccgacca gcccgacata
     6481 gccactgccg gccgccgcta aagcgccggc agtccggttg gcggccggcg cgccgtggcg
     6541 gcctgctcgt aggcgtaggc cagtcgcaac agcttggcct cgctccaggc gcggccggcg
     6601 aaggtgaggc cgagcggaaa gtccggcgtc tccttgccct cgaccccgcc gatgaagccc
     6661 gccggcacca ggacgctggg atagccggct ttcgccgcga tggaggcgcc ggccgtgccg
     6721 ggaaacacca cggcgtcgag cttgtgctgg gtcatatagg catcgagccc gcgctccttg
     6781 gccgactgca gatccatcgc ccgcgccgag cgatattcga gctccgacag gtcgccgcgc
     6841 gtggcttggg cggcgaggaa gaggtcctgg ccgaagcgca gcgccttgtc ggcgttggcc
     6901 tggttgaagg cgacgatgtc ggccatggtc ttgacctgct gccgactgcc cagtcgcgca
     6961 gatagagatt gagatcgtgc ttgagctcgt agaggaacac gatcgatggc gtggccggct
     7021 cgcccttgcg ccggctgagc ggattgcggt tcag
//
LOCUS       DASWGA010000062         1808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2282741, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000062 DASWGA010000000
VERSION     DASWGA010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2282741"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            326..>1808
                     /locus_tag="VF991_01335"
     CDS             326..>1808
                     /locus_tag="VF991_01335"
                     /inference="COORDINATES: protein motif:HMM:NF040127.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6531 domain-containing protein"
                     /protein_id="HEX9555105.1"
                     /translation="MRRIASVASFIALIWLALLSIGATGAQAGWSGWAAPSPDGYPTI
                     KDACTSWAWWAGDYLTYQYVTPAGQPAPTGVNCINRARTVFIIPDCNVAGEVQDATQP
                     SGCHPVNAEPLPKERGCANSPKDGGNPAAGNPICLAGGNKFQAVTDFETATPDKLGFT
                     RYYNSGGALSQATMLGAGWRSVFDAYLDVSNPGWYAYVHRPDGQVLEMDFSYGSYTWY
                     PPQADVDLQLTHTGSNWVLTDSDDTVWTFTQLTAQAPAAVLTSIQRRGGYTQNLQYDA
                     SNQLASVTDSYGRTLQFTFQNGLLSTMTAPDGGVYQYLYQTSSNGGATQLVRVVKPGQ
                     SPTSPPQNYLYENASFPLALTGIVDDIGTRYATYGYEQWGRPTTTQHLFADLNTVTFS
                     DPDNGRTVTNPLGLQETYQFAGIQGARKVTRIDRAASGSTPASFYTYSYDSRGYLSST
                     TDWNGAVTNRSNDTRGQPLSLTTAAGTPQARTVTYTWDATYHLP"
BASE COUNT          326 a          645 c          553 g          284 t
ORIGIN      
        1 gtgcccccgg gtcaagagcc cgggggcgtg gatggccgtg acaagcacgg ccatgacgta
       61 aaaggcattg ccagggtgca gaccgggcgg tgccgctgca tccatggaca ccgctctctg
      121 acgtcatggc cgtgcttgtc atgcttgtca cggccatcca cgtctgcccg cccgcgatcg
      181 cgcttcgcgc gccgcgagta tttcgcccgc agatacaact ttccggttga cggcgctcga
      241 tgcgccgcgc aacccttatc gagggttggg cggcgctcaa tgcaatggat catcggagat
      301 ccggcggccg cgggaggagg agcacatgcg ccgcatcgcc tcggtggcga gcttcatcgc
      361 cttgatctgg ctggcgctgt tgtcgatcgg cgcgaccggg gcgcaggcgg gctggagcgg
      421 ctgggccgcg ccgtcgcccg acggctatcc caccatcaag gacgcctgca cgtcatgggc
      481 gtggtgggcg ggtgactacc ttacatacca gtatgtgacg cccgcgggcc aaccggcgcc
      541 gacgggcgtc aattgcatca accgggcccg cacggtcttc atcatccccg actgcaatgt
      601 cgccggtgaa gttcaagacg cgacgcagcc aagcggctgc catccggtca atgcggaacc
      661 gcttcctaag gagcggggct gcgcaaactc gccgaaggat ggcggcaatc cggccgctgg
      721 caatcccatc tgcctcgccg gcggcaacaa gttccaggcg gtcaccgatt tcgagacggc
      781 gacgcccgac aagctcggct tcacccgcta ctacaacagc ggcggcgcgc tcagccaggc
      841 gaccatgctc ggcgccggct ggcgctcggt cttcgacgcc tacctcgatg tcagcaatcc
      901 cggctggtac gcgtatgtgc atcgccccga tgggcaagtg ctcgagatgg acttctccta
      961 tggcagctac acctggtacc cgccccaggc cgacgtcgac ctgcagctca cgcataccgg
     1021 ttccaactgg gtgctgaccg acagcgacga cacggtatgg accttcacgc agctcacggc
     1081 gcaggcgccg gcggcggtcc tcacctcgat ccagcgccgc ggcggctata cgcagaatct
     1141 gcaatacgac gccagcaacc agctcgcctc ggtcaccgat tcctatggcc gcacgctgca
     1201 attcaccttc cagaacggcc tcctcagcac gatgaccgcg ccggatggcg gcgtctatca
     1261 gtacctctat cagacctcct cgaatggcgg cgccactcag ctcgtgcgcg tggtgaagcc
     1321 gggacagtcg ccgacttcgc cgccgcagaa ctacctctac gagaacgcgt ccttcccctt
     1381 ggcgctgacc ggcatcgtcg acgatattgg gacgcgctac gcgacctacg gctatgagca
     1441 atggggccgg ccgacgacca cccagcatct cttcgccgac ctcaacacgg tgacgttcag
     1501 cgatccggac aacggccgca cggtcaccaa cccgctcggc ctgcaggaga cctatcagtt
     1561 cgcaggcatc cagggggcgc gcaaagtgac ccggatcgac cgcgccgcga gcggctcgac
     1621 cccggcatcg ttctatacct acagctacga ttcgcgcggc tacctcagca gcacgaccga
     1681 ctggaacggc gccgtcacca accgcagcaa cgacacccgc gggcagccgc tcagcctcac
     1741 caccgccgcg gggacgccgc aggcgcgcac ggtgacctat acctgggacg cgacctacca
     1801 tttgccga
//
LOCUS       DASWGA010000063         1664 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_6957, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000063 DASWGA010000000
VERSION     DASWGA010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6957"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..470
                     /locus_tag="VF991_01340"
     CDS             <1..470
                     /locus_tag="VF991_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019995645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HEX9555106.1"
                     /translation="ERSGLGYAAAAPFAKASLGQALLEPTRIYVKPLLSAIRATGAVK
                     GLAHITGGGLPGNVPRCLPDGTRARLDARRWSMPAVFRWLRELGRVPTEDMLRTFNCG
                     LGMIVVVAHADAARVAKVLAEAGESVCEVGVIEPAPTAEADCVIDHAESLWRS"
     gene            458..1099
                     /gene="purN"
                     /locus_tag="VF991_01345"
     CDS             458..1099
                     /gene="purN"
                     /locus_tag="VF991_01345"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEX9555107.1"
                     /translation="MAKLKVAILISGRGSNMAALIEAAKAADYPAEIALVVSNVAEAP
                     GLAIARKEGVPTAVVSHRDRPDRETFDRAVSVELERHGVELVALAGFMRIFSPWFPTR
                     WAGRLINIHPSLLPCFKGLHVQQQALDAGVRLSGCTVHFVIPDLDAGPIIAQAAVPVL
                     ADDTQDTLAARILRQEHRLYPLVVRWFAEGRVSLAEGRVAVTGATPLLFSTDP"
     gene            1139..1342
                     /locus_tag="VF991_01350"
     CDS             1139..1342
                     /locus_tag="VF991_01350"
                     /inference="COORDINATES: protein motif:HMM:NF019452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /protein_id="HEX9555108.1"
                     /translation="MADAQDDYPAHAQTYQSFGKLVLFTILFIVLLLSCMALGLVGNS
                     GLIALLLGIGGTLALLVAFTVLG"
     gene            complement(1371..>1664)
                     /locus_tag="VF991_01355"
     CDS             complement(1371..>1664)
                     /locus_tag="VF991_01355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEX9555109.1"
                     /translation="RSQAEQFYSVHKERPFFKSLCTFMTSGPVVVQVLEGEDAIARNR
                     EIMGATNPANAAAGTIRKDFAESMEANSVHGSDSPENAASEIAYFFAGAEIVG"
BASE COUNT          239 a          580 c          548 g          297 t
ORIGIN      
        1 tcgagcgcag cggcctcggc tacgccgccg ccgcgccgtt cgccaaggca tcgcttggcc
       61 aggcgctgct cgagcctacg cgcatctatg tgaagcccct gctgtcggcg atccgcgcca
      121 ccggcgcggt caaggggctg gcccacatca ccggcggcgg cctgcccggc aacgtgccgc
      181 gctgcctgcc cgacggcacg cgcgcgcgcc tcgatgcaag gcgatggtct atgccggctg
      241 tgttccgctg gctgcgcgag ctcggccgcg tgccgaccga agacatgctg cggacattca
      301 attgcggcct cggcatgatc gtggtcgtgg cgcacgccga tgccgcaagg gtcgccaagg
      361 tgctggcgga ggccggcgag agcgtgtgcg aggtcggcgt catcgagcct gcaccgaccg
      421 ccgaagccga ctgcgtgatc gaccatgccg agagcctatg gcgaagctga aagtcgccat
      481 cctgatctcg gggcggggca gcaacatggc cgccctgatc gaggcggcca aggccgccga
      541 ctatcccgcc gagatcgccc tggtggtgag caatgtggcc gaggcgccgg gcctcgcgat
      601 cgcccgcaag gagggcgtgc cgacggccgt cgtgtcccac cgcgaccgac ccgaccgcga
      661 aaccttcgac cgcgctgttt cggtcgagct cgagcggcac ggcgttgaac tggtggccct
      721 ggccggcttc atgcgcatct tcagcccgtg gtttcccaca cgatgggcgg gccgcctgat
      781 caacattcat ccttcgctgc tgccctgctt caagggcctg cacgtccagc agcaggccct
      841 cgacgccggc gtgaggctga gcggttgcac cgtccatttt gtgatccccg acctcgatgc
      901 cgggccgatc atcgcccagg ccgccgtgcc ggtgctggcg gatgacacgc aggacacgct
      961 tgccgcgcgc atcctgcgcc aggaacaccg gctctacccg ctggtcgtgc gctggttcgc
     1021 cgagggccgc gtctcgctgg ccgaggggcg cgtggctgtc acaggcgcca cccccctgct
     1081 cttctcaacc gacccttagt tggctattaa gacaccgcga cttttccgag gaaccgacat
     1141 ggccgacgct caggacgact accccgctca cgctcaaacc taccagtcgt tcggcaagct
     1201 cgtgctgttc acgatcctgt tcatcgtgct gctgctgtcc tgcatggcgc tgggcctggt
     1261 gggcaactcg gggctgatcg ccctgttgct gggtatcggc ggcacgctgg ccctgctggt
     1321 ggccttcacc gtcctgggct gacacgcggc ccctttcggg ccgcctttcg tcagccgacg
     1381 atttcggccc cggcgaagaa gtaggcgatc tcgctcgcgg cattctccgg cgaatcggag
     1441 ccgtgcacgg agttggcctc catcgattcg gcgaaatcct tgcgaatggt tcccgcggcg
     1501 gcattggccg ggttggtggc gcccatgatc tcgcgattcc tggcgatggc gtcttcgcct
     1561 tcgaggactt gcaccaccac cgggcccgag gtcatgaaag tgcaaaggct tttgaagaac
     1621 ggccgctcct tgtgcacgct atagaactgc tcggcctggc tgcg
//
LOCUS       DASWGA010000064         4299 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_7310, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000064 DASWGA010000000
VERSION     DASWGA010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4299
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7310"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..653)
                     /locus_tag="VF991_01360"
     CDS             complement(126..653)
                     /locus_tag="VF991_01360"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HEX9555110.1"
                     /translation="MKIVGSRRSAIAVALAAALSGQPTLPAGAQSQPGFAALLDAARA
                     HPGCLGIETGRTTSGKQVIFAWFEDKAALVAWYRSDAHQRAMKVAFPNLTFSREPLPD
                     TPADSGQILAIVSLKLSQAPPSEGATMPIGTIGIELYTPVPGGVAVGDRFAPKTIRVP
                     GLREIELGTAVGRPR"
     gene            complement(768..1562)
                     /locus_tag="VF991_01365"
     CDS             complement(768..1562)
                     /locus_tag="VF991_01365"
                     /inference="COORDINATES: protein motif:HMM:NF021541.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2272 domain-containing protein"
                     /protein_id="HEX9555111.1"
                     /translation="MNIDCPFVDVRVCWQPAALRSSHAFGPRLPAILLLVLTLAACGS
                     AQRSGGGYADRPPSDRVAYTAWQEWTRFGRSTVVYGGQAAGYTNRSGVSERSEPLASK
                     IGDYWGSCGHPDWNGRTSSKPWSGAFVAWVMAHSGIPAGDFPRDGRHGGYLAALYDHE
                     HRGGRLAFALHAPNEYAPKPGDLVCTGTAGPTWRHADSRTARRRIDNTASHCDIVTDV
                     RGGYVQAIGGNVKNSVTMSLYPVDSRGRLAPVAGKTWLLVVEKRVS"
     gene            1632..2390
                     /locus_tag="VF991_01370"
     CDS             1632..2390
                     /locus_tag="VF991_01370"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9555112.1"
                     /translation="MSLAIDLAGVGRLEELAFRGWPALESRDVAGWRLRFAGGYTKRA
                     NSINALSQDAETDPATIQKLEAAYRARGQPPIWRLSPLAPPAIAEVLATPFYRTIERS
                     LLQVGPLGGGFAVDPDVQIHPQPTPAWLEAFSAHSPVQPQHRDAMRRLLAAIAPPVGF
                     AFVEAEGRPMAMAIGVVQGDHMGLFDVLVMPHARRRGLARRVTESLYAWAGRHGARFA
                     YLQVVATNQAAMALYGAQGFRTAYEYEYRLPSSP"
     gene            2439..4160
                     /locus_tag="VF991_01375"
     CDS             2439..4160
                     /locus_tag="VF991_01375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX9555113.1"
                     /translation="MAHYPWEKSYPPGVKWELEIPKKTIHQIFDESCAQFGDRPFTDF
                     LDKVMTFRDYKEASDKAAAGFQKLGVRPGVNVGLYLPNTPHYLIAFFGVLKAGGKVVN
                     YSPLDAARELEFKIGDSETDILVTLDVAALYPKMAGMRGKTRLKKLIVGSIADYLPWP
                     KNWLYPIAKKKELSAWPRDDWHMSFKDLLANDGKYTSHAAGENLWDEVALLQYTGGTT
                     GTPKAAMLTHGCIIAAMSQGQAWTTPYTTPGTEKVVCVLPLFHIYALSGIMLGAVRNG
                     NQLILYPRPDIDMIVSDLATKKPTFLPGVPTLYTAILKHPKAQGLDLKSLKICMSGGA
                     PLPVEVQQSFEKLTGATLIEGYGLTETSPTGAICPVDKSVRRVGSCGVPMPGTVIEIR
                     DMEKGDSVLPVGKEHVGEVCIIGPQVMKGYWKKPEETDKVLFSHPNSNWKGLRTGDMG
                     YMDADGWLFLVDRSKDLILSSGYNVYPRMIEEAIYEHPAVEECIVIGIPDPYRQEAPK
                     AFVKLKPGTSLSFEELIKHLDGKIGKHEMPVALEIRAELPKTPVGKLSKKELKEEERA
                     KAQAKAA"
BASE COUNT          780 a         1390 c         1421 g          708 t
ORIGIN      
        1 attcgtcgct cgacacgatc tgggtcggga tgggcgacgc gaacccggct tcatccgccg
       61 gcaacagacc cgtcgcttgc gtgggaccga tctcgcgcat gatggcctcc tgtttgtaat
      121 ggcgctcagc gcggccgccc cacggccgtg ccgagctcga tctcgcgcag ccccggaacc
      181 ctgatggtct tcggcgcgaa cctgtctccg acggcgacgc cgcccggcac gggcgtatag
      241 agctcgatcc cgatcgtccc gatcggcatc gtcgcccctt cggatggcgg tgcttggctg
      301 agcttcagcg aaacgatcgc cagaatttgc ccgctgtcgg cgggcgtatc gggaagcggc
      361 tcgcggctga aagtcaggtt cgggaacgca accttcatcg ccctttgatg ggcgtccgac
      421 ctgtaccagg cgacgagtgc cgccttgtcc tcgaaccagg cgaagatcac ttgcttgccg
      481 ctggtcgtcc ggccggtctc gatgccgaga cagcccggat gggctcgggc ggcgtcgagc
      541 agcgcggcga agccgggttg ggattgggcg ccggcgggca gtgtaggctg ccctgacaag
      601 gcagcggcca gcgccacggc gattgccgat cggcggctcc cgacgatttt catgacaggc
      661 ctcccgacat ccttgcggac agtccacgat cagggctcgg tacccatggg taccatgcgg
      721 atcatgtggt acccgaaagt accagtcaag cactttcaga tcttgggcta ggagacgcgc
      781 ttctcgacca ccagcagcca ggtcttgccg gcgaccggcg ccaggcggcc gcgcgaatcg
      841 acgggataga ggctcatcgt cacgctgttc ttgacgttgc cgccgatcgc ctggacgtag
      901 ccgccgcgca cgtcggtgac gatgtcgcaa tggctggcgg tgttgtcgat gcgccgccgc
      961 gcggtgcgcg aatcggcatg gcgccaggtc ggcccggcgg tgccggtgca gacgaggtcg
     1021 ccgggcttgg gggcatattc gttgggcgcg tgcagcgcga aggccaggcg gccgccccgg
     1081 tgctcgtgat cgtagagcgc ggcgaggtag ccgccgtgac ggccatcgcg cgggaagtcg
     1141 ccggcgggaa tgcccgagtg agccatcacc caggcgacga acgcgcccga ccacggcttg
     1201 ctcgaggtcc ggccgttcca gtcgggatgg ccgcagctgc cccaatagtc gccgatcttg
     1261 ctggcgagcg gctcgctgcg ctcgctcacg ccgctgcggt tggtgtagcc ggcggcctgg
     1321 ccgccataga ccacggtcga ccggccaaac cgcgtccatt cctgccaggc ggtgtaggcg
     1381 acgcggtcgg acggcgggcg gtcggcgtag ccgccaccgc tgcgctgggc gctgccgcag
     1441 gccgccagtg tcaggacaag cagaaggatt gctggcagcc ggggaccaaa cgcgtgggag
     1501 gaacgcaaag cggccggctg ccagcaaaca cgaacgtcga cgaaggggca gtcgatattc
     1561 atgtacgact tgcaggagat aaaataaatg attgttattg cttggtttta agctaacaca
     1621 attgacggac gatgtcactg gctatcgacc ttgccggggt gggtcggctg gaagagctgg
     1681 cattccgcgg ctggcctgcc ctggaaagcc gggatgtcgc cggctggcgc ttgagattcg
     1741 ccggcggcta caccaaaaga gcaaattcta tcaatgcctt aagccaagat gctgagaccg
     1801 atccggcgac catccagaag ctcgaagcgg cctaccgggc ccgcggccag ccgccgatat
     1861 ggcggttaag ccccttggcg ccgccggcga tcgccgaggt cttggcgacc ccgttctatc
     1921 ggaccatcga gcgcagcctc ctgcaggtcg gcccgctcgg cggcggcttt gccgtcgacc
     1981 cggacgtgca gatccatcca cagccgacgc cggcatggct cgaggccttc tcggcccata
     2041 gcccggtgca gccgcagcat cgcgacgcca tgcggcgcct gttggcagcc atcgcccctc
     2101 cggtgggctt cgccttcgtc gaggcggaag gccggccgat ggccatggcg atcggcgtcg
     2161 tgcagggcga ccatatgggg ctgttcgacg tgctggtgat gccgcacgcg cgccgccgcg
     2221 gcctggcgcg ccgggtcacc gagagcctgt atgcctgggc agggcggcac ggcgcgcgct
     2281 tcgcctactt gcaggtcgtc gccaccaacc aggcggcgat ggcgctctac ggcgcgcagg
     2341 gtttccgcac ggcctacgag tatgagtatc gcctgccctc ttcgccttga ccctccggcg
     2401 gccggcctca atagtcgcgc gagggaggaa cacaaaaaat ggcacactac ccgtgggaga
     2461 agagctatcc gcccggcgtg aagtgggagc tcgagattcc gaagaagacc atccatcaga
     2521 tcttcgacga aagctgcgcc caattcggcg accggccctt caccgatttc ctcgacaagg
     2581 tgatgacctt ccgcgactac aaggaagcct cggacaaggc agcggcgggt ttccagaagc
     2641 tcggcgtgcg gccgggcgtc aatgtcggcc tgtacctgcc caacacgccg cattatctga
     2701 tcgctttctt cggcgtgctc aaggccggcg gcaaggtggt gaactacagc ccgctcgacg
     2761 ccgcccgcga gctcgaattc aagatcggcg attccgagac cgacatcctg gtgacgctcg
     2821 acgtcgccgc gctctatccc aagatggcgg ggatgcgcgg caagacccgg ctgaaaaaac
     2881 tgatcgtggg ctcgatcgcc gactatctgc cgtggccaaa gaactggctc tatccgatcg
     2941 ccaagaagaa ggaactctcg gcctggccgc gcgacgactg gcacatgtcg ttcaaggatc
     3001 ttttagccaa cgacggcaag tacacgtccc atgccgcggg cgagaacctg tgggacgagg
     3061 tggcgctgct gcaatacacc ggcggcacca ccggcactcc caaggccgcc atgctgacgc
     3121 acggctgcat catcgcggcg atgagccaag gccaggcctg gaccacgccc tacaccacgc
     3181 cgggcaccga aaaggtcgtg tgcgtgctgc cgctgttcca catttacgcc ctgtcgggaa
     3241 tcatgctggg cgcggtgcgc aacggcaacc agctcattct ctacccgcgg cccgacatcg
     3301 acatgatcgt gagcgacctc gccacgaaga agccgacctt cctgcccggc gtgccgacgc
     3361 tctatacggc gatcctcaag catcccaagg cgcagggcct cgacctgaag tcgctgaaga
     3421 tctgcatgtc gggcggcgcg cctttgccgg tcgaggtgca gcagagcttc gagaagctga
     3481 ccggcgccac cctgatcgag ggctatggcc tgaccgagac ctcaccgacc ggcgcaatct
     3541 gcccggtcga caagagcgtg cgtcgcgtcg gctcgtgcgg cgtgcctatg ccggggaccg
     3601 tgatcgagat ccgcgacatg gagaagggcg acagcgtgct gccggtcggc aaggagcatg
     3661 tcggcgaagt ctgcatcatc ggcccgcagg tcatgaaggg ctactggaag aagcccgagg
     3721 agaccgacaa ggtgctgttc agtcatccca acagcaactg gaagggtctg cgcaccggcg
     3781 acatgggcta catggacgcc gacgggtggc tgttcctggt cgaccgatcg aaggacttga
     3841 tcctttcgtc aggctacaac gtctatccgc ggatgatcga agaagcgatt tacgagcatc
     3901 ccgccgtcga ggagtgcatc gtgatcggta ttcccgatcc ctaccgccag gaagcgccca
     3961 aggcgttcgt caagctgaag cccggtacgt cgctcagctt cgaggaattg atcaagcatc
     4021 tggacggcaa gatcggcaag cacgagatgc cggtggccct cgagatccgc gccgagctgc
     4081 ctaaaacgcc ggtcggcaag ctctccaaga aggaactgaa ggaggaagag cgcgccaagg
     4141 cccaggccaa ggcggcctaa ctttgcctcc cccgtcatac cgggggaggt gcccccgaag
     4201 ggggcggagg gggaaggcct cacacgcgat tttcgatcat tatgatctca agtcgggaga
     4261 cgcattgact gaggctttcc ccctccggcc ctacgggcc
//
LOCUS       DASWGA010000065         2438 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1271345, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000065 DASWGA010000000
VERSION     DASWGA010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2438
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1271345"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1328)
                     /locus_tag="VF991_01380"
     CDS             complement(75..1328)
                     /locus_tag="VF991_01380"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9555114.1"
                     /translation="MTVRSPLDDVRAHYEALPYPPRDPRDEAIRLITGTPSHLLEVNH
                     YLFSGRLNFARPFRALVAGGGTGDACIMIAQQMVDRRCPGEVVYLDLSMSSRQICEAR
                     AKARGLRNIQFLTGSLLDLPSANIGSFDYIDCTGVLHHLPDPSAGMKALASVLQPDGG
                     VGVMLYGQYGRTGVYPLQEMLRTLAPLSMATEDRMAMAKRLIRFLPTTNLFRRNPYLN
                     DHVTGGDAGLYDLLLHSCDRAFTVPEIGAMAAACGLRVVAFLEPVRYEPATYMSDPII
                     ARQTSSLPLLERAAFAECLAGNLRSHVFYATRAGFDTVARPEDTSAIPVLREMDAQKL
                     AAGLQPGTPLIANLDGFPWRAQLPGLAPRIIAQIDGRKTVAEIYTSLGAQGGLPQWED
                     FYAQFEDLYVKLNGVNHLLLRFRTT"
     gene            1435..1986
                     /locus_tag="VF991_01385"
     CDS             1435..1986
                     /locus_tag="VF991_01385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEX9555115.1"
                     /translation="MKGYFGIGVEGVSKAMNVGTLFRTAHAFGASFVFTLGAQYNRRE
                     GARSDTSDTPRSVPTYNFADLEAFRLPQGCRLVGVEITDTAIELPSFRHPRQAAYILG
                     AEREGLSADLQSLCDYVVKIPTRFSVNLGVAGALIMYDRLLSLGRHAARPVAEGAPTE
                     PIELPRFGEPMYMRRRRSKQKAL"
     gene            2120..>2438
                     /locus_tag="VF991_01390"
     CDS             2120..>2438
                     /locus_tag="VF991_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011653883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEX9555116.1"
                     /translation="MVSLPTEPLQILEPSPARGRNDRRRNLVGLSRDALKTTLVEAGL
                     EPFRAHQVWQWIYWHGVSDFDPMTNIAKQTRDRLAELFVVERPQIVTEQRSVDGTRKW
                     LLRF"
BASE COUNT          416 a          788 c          841 g          393 t
ORIGIN      
        1 cgagaaggcg atggcgcttg cccggaccga gccggagcgc aagctgatgg cgcgccgcct
       61 catgaattag gggctcaggt cgtcctgaag cgcagcagga ggtgattgac gccattcagc
      121 ttgacgtaga gatcctcgaa ctgggcataa aaatcttccc actgcggcag gccgccctgg
      181 gcgccgagcg aggtgtagat ctcggccacg gtcttgcggc cgtcgatctg ggcgatgatg
      241 cgcggcgcca gccccggcaa ttgggcgcgc cacgggaagc cgtcgagatt ggcgatcagc
      301 ggcgtgccgg gttgcaggcc ggcggcgagc ttttgggcat ccatctcgcg cagcaccgga
      361 atggccgagg tgtcctccgg ccgcgccacc gtgtcgaagc cggcgcgcgt ggcatagaac
      421 acgtggctgc gcagattgcc cgccaggcac tcggcgaagg cggcgcgctc gagcagcggc
      481 agcgagctgg tctggcgggc gatgatggga tcgctcatgt aggtggcggg ctcgtagcgt
      541 accggctcga ggaaggccac gacccgcagg ccgcacgccg ccgccatggc gccgatctcg
      601 ggcacggtga aggcgcggtc gcagctgtgc agcagcagat cgtagagacc ggcatcgccg
      661 ccggtgacgt ggtcgttgag ataggggttg cggcggaaca ggttggtggt cggcaggaag
      721 cggatcagcc gcttggccat ggccatgcgg tcctcggtcg ccatcgagag cggcgccagc
      781 gtgcgcagca tctcctggag cgggtagacg ccggtgcggc cgtattggcc gtagagcatc
      841 acgccgacgc cgccgtcggg ctgcagcacg ctcgccagcg ccttcatgcc ggccgacgga
      901 tcgggcaggt gatgcagcac gccggtgcag tcgatgtagt cgaagctgcc gatattcgcg
      961 ctcggcaggt cgagcagcga gccggtgagg aactggatgt tgcgcaggcc gcgcgccttg
     1021 gcgcgggcct cgcagatctg gcgcgagctc atcgacaggt cgagatagac gacctcgccc
     1081 gggcagcgcc gatcgaccat ctgctgggcg atcatgatgc aggcatcgcc cgtgccgccg
     1141 cccgccacca gggcgcggaa cggccgcgcg aaattcagcc ggccggagaa caggtagtga
     1201 ttgacctcga gaaggtggct cggtgtgccg gtgatcaggc ggatcgcctc atcgcgcggg
     1261 tcgcgcggcg gatagggcag cgcttcgtag tgggcgcgaa cgtcatccaa cggcgagcga
     1321 acggtcattc tggccttgtt tcacgacggg cgcggcgcta cccggaggga aagcagcgtc
     1381 tgcaagggat tagtgcaaat cgcaccgccg tgaaaggggg ccgtgaaagg ggccatgaaa
     1441 ggctatttcg gcattggcgt ggaaggcgtc agcaaggcca tgaacgtggg caccttgttc
     1501 cgcactgccc atgccttcgg cgcctccttc gtgttcacgc tcggcgccca gtacaatcgc
     1561 cgcgagggcg cccgcagcga cacctccgac acgccgcgct cggtgccgac ctacaacttc
     1621 gccgacctgg aagcctttcg cctgccccag ggctgccggc tggtcggcgt ggagatcacc
     1681 gacaccgcga tcgagctgcc gagcttccgc catccgcgcc aggccgccta catcctgggc
     1741 gccgaacgcg aaggcctgtc ggccgatcta cagtcgctat gcgactacgt ggtgaaaatc
     1801 ccgacccgct tctcggtcaa tctcggggtc gccggcgccc tgatcatgta cgaccggctc
     1861 ttgagcctcg gccgccacgc cgcccgtccg gtcgccgagg gcgcaccgac cgagccgatc
     1921 gagctccccc ggttcggcga gccgatgtac atgcggcgtc gtcggtccaa gcaaaaagct
     1981 ctttgaaaac aaagagttat cttattcatg ggcgtctatt tctatcttcg tggaaatagc
     2041 ggttgccccc tcaatggtgc gcacttattc gtcgccgatg tggcggggaa caggggcatg
     2101 cactatctga agccgcacca tggtttccct gcctaccgag cccctgcaga tcctcgaacc
     2161 cagtccggcg cgcggccgca atgaccggcg ccgcaacctg gtcgggctat cgcgcgacgc
     2221 gctgaagacg accctcgtcg aggcggggct cgagccgttc cgagcccacc aggtctggca
     2281 atggatctac tggcacggcg tcagcgattt cgaccccatg accaacatcg ccaagcagac
     2341 gcgcgaccgt ctcgccgagc tgttcgtggt cgagcgcccg cagatcgtca ccgagcagcg
     2401 ctcggtcgac ggcacgcgca aatggctgct gcgctttg
//
LOCUS       DASWGA010000066        11932 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_7464, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000066 DASWGA010000000
VERSION     DASWGA010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 11932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11932
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7464"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VF991_01395"
     CDS             <1..192
                     /locus_tag="VF991_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEX9555117.1"
                     /translation="PRAGGGPMLRQTYGGPSSEIALRKAGLIWGGRLHPLKARVLLET
                     CLRAGLGRDIITEVFDAFG"
     gene            222..1643
                     /locus_tag="VF991_01400"
     CDS             222..1643
                     /locus_tag="VF991_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEX9555118.1"
                     /translation="MLEALDANLLARLQFAFTVSFHFIFPSFTIGLASYLAVLEALWL
                     WTARQVYLDLFKYWLKIFALTFGMGVVSGVVMSYQFGTNWSVFADRAGPIVGPLMAYE
                     VLTAFFLEAGFLGVMLFGMNRVGRGLHFIATLAVAVGTFISAFWILSANSFMQTPAGY
                     AINAGGQFVPADRLAIIFNPSFPYRLVHTVFAAYLTTALVVGAVGAWHLLRERASEGA
                     RVMFSMAMGMITVVAPLQILAGDQHGLNTLEHQPVKVMAMEGHFKSYDNGAPLVLFGW
                     PDEARAEVLYDVEIPKASSLILKHSLDAPLKGLDSVDRKEWPPVAIVFWAFRVMVGLG
                     MLMLALAVFSLWARVRHRLYDWKLLHLFALAMGPAGFVAVIAGWVTTEVGRQPYTVHG
                     LLRTSESASPLHAPAVASSLLAFIVVYFIVFGAGVFYILRLMSHSPQAGEEGPERGQP
                     VRAAGITPAPAVPDALGSPGGGA"
     gene            1643..2650
                     /gene="cydB"
                     /locus_tag="VF991_01405"
     CDS             1643..2650
                     /gene="cydB"
                     /locus_tag="VF991_01405"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012649633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEX9555119.1"
                     /translation="MMPAFDLPTLWAFIIAFAIFAYVVMDGFDLGIGILFSRIPAGHE
                     RDTAMNTIAPVWDGNETWLVLGGGGLLAAFPLAYGTILSALYAPIVAMLLALIFRGVA
                     FEFRWRDPRHRPYWDFAFSLGSIMAALAQGITLGALLQGIAVENRAYAGGWFDWLTPF
                     SVLVGVSLVCGYALLGSTWLIMKSEGTLQARSYRLAFGLAIGTIIAIALVSAATPFLS
                     DVYWRRWFAWPQVLFTAVVPVLVAVATVVFFTSLKRRHHYTPFLMALLMFALSLAGLG
                     ISLFPYVVPPKITIWDAAAPTSSLMFMLPGALVMVPIILAYTGYSYWVFRGKTGHEGY
                     H"
     gene            complement(2755..3105)
                     /locus_tag="VF991_01410"
     CDS             complement(2755..3105)
                     /locus_tag="VF991_01410"
                     /inference="COORDINATES: protein motif:HMM:NF021390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HEX9555120.1"
                     /translation="MKRLSIAALILVAGCAQQQQPVTKLIPRPAPDDPTPSGIAYLCD
                     GRKEVTVVYAKNRASVTLGDKTWRMVYQPTGDGFRYADTANEWIGRDDLASLRENITA
                     RPLAFNCRPTRRTT"
     gene            3156..3950
                     /locus_tag="VF991_01415"
     CDS             3156..3950
                     /locus_tag="VF991_01415"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9555121.1"
                     /translation="MPHFKLSDGAALYYETHGSGPPLFLVPGLGGDGRFWGANVGELA
                     RHFTVIVHDHRGTARSTLSKIAYSVEQMADDALQLIDGLGFERVHWCGHSTGGAMGQV
                     LAIDHPDRLSRLVLSATWAKTDAFFHRLFEVRSLTLKELGPAAYLKGSALALNMPSWV
                     RDHDVELAAAEAKADETIPVPEIVLSRIAAIVSHDRREQLQRVRAPTLAICARDDMVT
                     PLYFTEELVRLIPGARAYVLPDGGHFYPNVHGGEFRRVVTSFLQES"
     gene            4437..5612
                     /locus_tag="VF991_01420"
     CDS             4437..5612
                     /locus_tag="VF991_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20 aminoacylase family protein"
                     /protein_id="HEX9555122.1"
                     /translation="MKIEPRIAAASAELTAIRRDIHAHPELGFEEERTSRIVAGKLKE
                     WGLEVTTGIGKTGVVGTIRVGNNPRAIGLRADMDALPMDELNTFDHRSQHKGRMHACG
                     HDGHTTMLLGAAKYLSATRNFDGTVHLIFQPAEEGRGGAAAMVKDGLFEKFPCEQIFG
                     MHNRPKLDVGKFAIRSGPQMAGGGLFDIKITGKGAHGARPETGIDPVIIATQIISALQ
                     SVVSRNVAPLDSAVISVTQMHAGDAYNVIPQEAVLRGTIRAFRKETMALIKERIETIS
                     AGIAKTLGGKAEADVRIAFPPLVNNKEAVKFIADVAAEIVGEDNMNREGPFVMASEDF
                     SYMLEKVPGAFINIGNGGGEGGCEVHNPSYDFNDDIITLGATLWSRVVERKLAKDAR"
     gene            5615..6160
                     /locus_tag="VF991_01425"
     CDS             5615..6160
                     /locus_tag="VF991_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555123.1"
                     /translation="MSQSVDPAPPVGVRPWLLRDLPYAAMLALALGGIVLTSFRGPTT
                     YYYWMALAPIYGLISIVSGWRQLATGAERMKLVTTQALHWLAFLAAMWLMFLPQVRGV
                     VNDNATSLSLLILLALGTFVAGVHAGVWRICAVGAFLAASVPAVAWIQESTLLLLVGA
                     LLVVAVGAAFWWMWRRESGRA"
     gene            6157..6753
                     /locus_tag="VF991_01430"
     CDS             6157..6753
                     /locus_tag="VF991_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX9555124.1"
                     /translation="MIILWIDYVSPYAFVAKAGAYALEADYEVELLWRPYTLDVASFM
                     GAVEERDPHHWRRVRYAYMDARRFANKQGLTLKGPKRVYYARPANAGMLYAQRHGAFR
                     RYNDLAFDRFWRRELDPEDVDAVAALLGEAGAPPGFASFLTGEGGAEHDRRRNEAEAS
                     GVFGVPTFVFEGELFWGGDRIGLLRERLDEKGVKRRPA"
     gene            6770..7303
                     /locus_tag="VF991_01435"
     CDS             6770..7303
                     /locus_tag="VF991_01435"
                     /inference="COORDINATES: protein motif:HMM:NF037928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
                     /protein_id="HEX9555125.1"
                     /translation="MTKSVMKPRRKAKLPLAPAMEPRHKRTLIVVADGARARFFEPDH
                     DAHTLVPARQADMVAPDSRRLTHDIVTDRPGRGFSAARSSMRHAFEAPHDVHKLEKHN
                     FTAALAQALEDARARRQFDRLVLVAPRRSLGELRALLSPQVKKIVSHEVAKDLTASTP
                     QSLWRALEKVLPTPVLA"
     gene            complement(7306..7686)
                     /locus_tag="VF991_01440"
     CDS             complement(7306..7686)
                     /locus_tag="VF991_01440"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044238 - primary metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HEX9555126.1"
                     /translation="MHTPLRITFQNTPSSAAIRKLIEEQVDHLEQFFGRMTACHVVFK
                     LPDGNHRTGGLYEVTVHLKMPGGVTVDVDRTPGLDERFADPLFAVTDAFRRARRRLQD
                     RAKVMRHEVKALHKRIDRTLDQPD"
     gene            complement(7754..8536)
                     /locus_tag="VF991_01445"
     CDS             complement(7754..8536)
                     /locus_tag="VF991_01445"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX9555127.1"
                     /translation="MVPVTVDGETVKLATITYKPVGAGPFPTLIFHHGSTGRGFDPSL
                     FARPYDPKSLANWFTARGWAVVLPSRRGRGGSEGLYDEGFSSLGRAKGYTCEETISLA
                     GADRALGDIDAITPAILAQPFVDRSKVAVGGQSRGGILSVAWSGRQPGTPRAVINFVG
                     GWLGTGCWSASTVNQDLFGRGAVYGQPTIWLYGDNDPFYPLPHSRANFAAFQAAGGKG
                     AFHDYTPPEGLTGHQIGSAPQLWSATLESYLAAQGLPAKTAP"
     gene            complement(8602..8853)
                     /locus_tag="VF991_01450"
     CDS             complement(8602..8853)
                     /locus_tag="VF991_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6356 family protein"
                     /protein_id="HEX9555128.1"
                     /translation="MFRRFTDHPAQVNETYLQHMGAAFSFGGRMLVGALACFVHGFCP
                     WLCLTRGSDTIRSLHHRMVSHRVVQPARAASAAAVAAND"
     gene            8945..9424
                     /locus_tag="VF991_01455"
     CDS             8945..9424
                     /locus_tag="VF991_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX9555129.1"
                     /translation="MAAKTSLDSFDKKILDCLQDNSDMALAEIARRVGLSTTPCWRRI
                     NRLQEVGVIRARVALLERKAVNAGVTVFVAVRTAQHNAQWLGRFAKAVASFPEVMDCY
                     RMSGEIDYLIRLALPDIDAYDAFYKRLIAKIELSDVTSMFAMEEIKSTTRLPLSYLP"
     gene            9572..10555
                     /locus_tag="VF991_01460"
     CDS             9572..10555
                     /locus_tag="VF991_01460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HEX9555130.1"
                     /translation="MTTGKNRKKVLIVGRMPQAGIDVLKKRDDVDYEILTDDSVPSLH
                     AKLKDANAVTLGGTPFRQAELDAAPGMMVVARLGVGFDSVEIPALNKRKIPLMTTGIA
                     NSVSVAEHAMYMLLASARLTRKHDRFVRENAWGQRLSDLPADLAGKSILVVGMGRIGS
                     RTVKRCVAFEMDVYVLDPNISEADIKKAGAKKVTDLKAILPKVDFASVHCPKSPETVN
                     MFNAETLALMKPDAFLVNTARGGIINEEALYKALTSGKLRGAGLDVLDKEPPDPTNKL
                     FGLDNVIFSPHMAGVTKEASDRMAVSAIENILSVFDGRVNAAHVVNKEVLS"
     gene            complement(10580..10750)
                     /locus_tag="VF991_01465"
                     /pseudo
     CDS             complement(10580..10750)
                     /locus_tag="VF991_01465"
                     /inference="COORDINATES: protein motif:HMM:NF021758.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Rdx family protein"
     gene            10847..11827
                     /locus_tag="VF991_01470"
     CDS             10847..11827
                     /locus_tag="VF991_01470"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9555131.1"
                     /translation="MKYGPLGRSGLIVSRICLGGNSWGAKGRRGWGKFDEAEAPAYFK
                     RALDVGINFFDTADNYNFGRSEEIMGGTLMKMVKREDIVLSTKVGIRQSPVANDVGTG
                     RKHLMASIDQQLKRLQTDYIDVYQVHRLDPHTPMEETMYSLDQLVRSGKVRYIGGSTM
                     PAYKFAQMVMIADWKGYARPIAMQNLYNMIQREEEREMNRLCHEQGVGLIPYSPLARG
                     FLAANRSKEGGGATERAKNDAQVQAGTYRDCDWEIAERLKKVAAGKNASPAQTALAWL
                     LSKPYMGSPIIGATSLDQLTSAAQATEFAITPDEAKMLEEPYQFRVSPMN"
BASE COUNT         1955 a         3949 c         3930 g         2098 t
ORIGIN      
        1 ccgcgggccg gtggtggccc catgctgcga cagacttacg gtggtccgag ttcggaaatc
       61 gcgctacgca aggcaggcct gatctggggc gggcgtttgc accccttgaa ggcgcgcgtg
      121 ttgctcgaga cctgtcttcg cgccggtctt ggccgcgaca tcatcaccga ggtgttcgac
      181 gccttcggct agggtagact atccggcgcg aggtgaacgt catgctcgaa gcactcgatg
      241 caaacctgct ggcccgcctg cagttcgcct tcaccgtctc gtttcacttc atcttcccgt
      301 ccttcacgat cgggctggcg agctatcttg ccgtgctcga ggcgctgtgg ctgtggaccg
      361 cccgccaggt ctatctcgac ctgttcaagt actggctgaa gatcttcgcg ctcaccttcg
      421 gcatgggcgt cgtgtccggc gtcgtcatgt cctaccagtt cggcaccaac tggtcggtgt
      481 tcgccgaccg tgcgggccca atcgtcggcc cgctgatggc ctacgaggtg ctgacggcat
      541 tcttcctcga ggcgggcttt ttaggcgtca tgctgttcgg catgaatcgg gtcgggcggg
      601 gcctgcactt catcgccacc ctggccgtcg cggtcggcac cttcatctcc gccttctgga
      661 tcctgtcggc caacagtttc atgcagacgc cggcgggcta cgccatcaac gcgggcggcc
      721 agtttgtgcc ggccgacagg ctggccatca tcttcaatcc ctccttcccc tatcgcctgg
      781 tccacaccgt gttcgcggcc tacctgacca cggcgctggt cgtgggcgcc gtcggcgcct
      841 ggcatctgtt gcgcgagcgc gccagcgaag gcgcccgtgt gatgttctcc atggcgatgg
      901 gcatgatcac ggtggtggcg ccattgcaga tcctggcggg cgatcagcat gggctgaaca
      961 cgctggaaca ccagccggtc aaggtcatgg ccatggaggg ccacttcaag agctacgaca
     1021 atggcgcgcc cctcgtgctc tttggctggc ctgacgaggc cagggccgag gtgctttacg
     1081 atgtcgagat tcccaaggcc tcgtcgctga tcctgaagca ttcgctcgat gcgccgctca
     1141 aagggctcga ttcggtcgac cgcaaggaat ggccgccggt ggcgatcgtg ttctgggcct
     1201 tccgggtcat ggtcgggctc ggcatgctga tgctggcgct cgccgtcttc agcctgtggg
     1261 cgcgcgtcag gcaccgactt tacgactgga agctcctgca cctcttcgcg ctggcgatgg
     1321 gaccggccgg cttcgtcgcc gtgatcgctg gctgggtcac gaccgaggtc ggacgccagc
     1381 cctacacggt gcacggcctg ttgcgcacat cggagtcggc ctcgccattg catgcaccgg
     1441 cggtggcgag ctcgctgctg gccttcatcg tcgtctactt catcgtcttc ggcgccggcg
     1501 tcttctacat cctgcggctg atgagccact cgccgcaggc cggcgaagaa gggcccgagc
     1561 gcggccagcc ggtgcgggcg gccggcatca cgccggcgcc cgcggtgccc gacgcgctcg
     1621 gatcgccggg cggaggagcc tgatcatgcc cgccttcgac ctgcccaccc tgtgggcctt
     1681 catcatcgcc ttcgcgatct tcgcctacgt ggtgatggac ggtttcgatc tcggcatcgg
     1741 catcctgttc tcccggattc cggccggcca tgaacgcgac acggcgatga acaccatcgc
     1801 gccggtgtgg gacggcaacg agacctggct ggtgctgggc ggcggcgggc ttttagccgc
     1861 cttcccgctc gcctacggca ccatcctgtc ggcgctctat gcgcccatcg tcgccatgct
     1921 gctggcgctg atcttccgcg gcgtcgcctt cgagttccgc tggcgcgatc cccgccatcg
     1981 tccctactgg gatttcgcct tcagcctggg ctcgatcatg gcggctttgg cgcagggcat
     2041 cacgctcggc gctctgctgc agggcatcgc cgtcgagaac cgcgcctatg ccggcggctg
     2101 gttcgactgg ctgacgccgt tcagcgtgct ggtcggcgtg agcctggtct gcggctacgc
     2161 gctgctcggt tcgacctggt tgatcatgaa gagcgagggc accctgcagg cgcgcagcta
     2221 tcgcctggcc tttggcctgg ccatcggcac catcattgcc atcgcccttg tgagcgcggc
     2281 cacgccgttc ctgagcgacg tctattggcg gcgctggttc gcctggccgc aggtcctgtt
     2341 caccgccgtg gtgccggtgc tggtcgccgt tgccaccgtg gtgttcttca ccagcctcaa
     2401 gcgccgtcac cattacacgc cgtttctgat ggcgctcctg atgtttgcgc tcagcctcgc
     2461 cggcctcggc atcagcctgt tcccttatgt cgtgccgccc aagatcacga tctgggacgc
     2521 tgccgcgccg acttccagct tgatgttcat gctgcccggc gcgctggtga tggtgccgat
     2581 catcctggcc tacaccggct attcctactg ggtgtttcgc ggcaagaccg ggcacgaggg
     2641 ctatcactga tgcccgcgcc caggcagtgg ctgtggtttt ttggcctgtg ggccgcgggc
     2701 gtcggcgtca ccgccctggt cggttacggg ataaagctat ggctgaagtg acgatcacgt
     2761 cgtccgccgc gtcggccggc agttgaaagc gagcggccgg gcggtgatgt tttcgcgcaa
     2821 gctcgccagg tcgtcgcgac cgatccattc gttggccgtg tcggcatagc ggaagccgtc
     2881 gccggtcggc tggtacacca tgcgccaggt cttgtcgccc agcgtcaccg aggcgcggtt
     2941 cttggcatag accacggtca cttccttgcg gccgtcgcag agataggcga tgcccgacgg
     3001 cgtcgggtcg tccggcgcgg ggcgcgggat cagcttggtc accggctgct gctgttgcgc
     3061 gcagccggcc accaggatca atgcggcaat cgacaggcgc ttcatggtgc gctttcctcc
     3121 cggccggcac cttagggaaa tggcgggagc gttcaatgcc acacttcaag ctcagcgacg
     3181 gcgcggcgct ctactacgaa acgcacggca gcggcccgcc gctgttcctg gtgcctgggc
     3241 tgggcggcga cggccgtttc tggggcgcca atgtcggcga gctcgccagg cattttaccg
     3301 tgatcgtgca cgatcatcgc ggcaccgcgc gcagcacgct gtccaagatt gcctactcgg
     3361 tcgagcagat ggccgacgac gccctgcagc tgatcgacgg gctgggcttc gagcgggtcc
     3421 attggtgcgg ccattcgacc ggcggcgcca tgggccaggt gctggcgatc gaccatcccg
     3481 accgcctctc ccggctggtg ctgagcgcga cctgggccaa gaccgacgcc ttcttccatc
     3541 gcctgttcga ggtgcgttcg ctgacgttga aggagctggg gccggccgcc tatctcaagg
     3601 ggagcgcgct cgccctcaat atgccgtcct gggtgcgcga tcacgatgtc gagcttgcgg
     3661 ccgccgaggc caaggccgac gagaccattc ccgtgccgga gatcgtgctc tcacgcatcg
     3721 ccgccatcgt gtcccacgac cggcgcgagc aactgcagcg cgtgcgcgcg ccgacgcttg
     3781 cgatctgcgc ccgcgacgac atggtcacgc cgctctactt caccgaggag ctcgtccggt
     3841 tgatccctgg cgccagggcg tatgttctgc ccgacggcgg gcatttctat ccgaacgtgc
     3901 atggcggcga gtttcggcgc gtagtgactt ctttcctgca ggagtcctga atggccttgc
     3961 ggcttgtggc tctcaccatg cccggtctct gtcgcgctac agtgcaagca aacaggccga
     4021 gcgatgcaga cagtgcttgc tgcagcagct cctgagtttt tgcgtcggat ggtgcgcaaa
     4081 aactcaaaag ccaagatccc cggcactggc gaccaagtga tgattgacac cagggttagt
     4141 gttatttacg atatgccgtc agtcaaagat tcaagacacg gacgaacacg gacgacaagg
     4201 agcacccaac caaagggccg atccgggcct gaaatctgca tgctggttct ctgtctcact
     4261 tgcgtggtgc gctgcaccct cctgattggc gtagcgcttg cggaaattgc ggaaactcgc
     4321 cgcggagtgc accggtatct gcgcacgtag agcggccatg cagatccggg cgtgcacgcg
     4381 cgcagaattc ggcgtgtaat gctcttttct agtctagccg gagtgcacgg agtcccatga
     4441 agatcgaacc caggatcgcc gccgcgtccg ccgagctcac cgccatccgg cgcgatatcc
     4501 acgctcatcc cgagctcggc ttcgaggagg agcggacctc gcggatcgtg gcgggcaagc
     4561 tcaaggaatg gggcctggag gtcacgaccg gtatcggcaa gaccggcgtc gtcggcacca
     4621 tccgggtcgg caacaacccg cgcgccatcg gcctgcgcgc cgacatggac gcgctgccca
     4681 tggacgagct caacacgttc gatcacagga gccagcacaa gggccgcatg catgcctgtg
     4741 gccatgacgg ccacaccacg atgctgctgg gcgccgccaa gtatctctcg gcgacgcgca
     4801 acttcgacgg caccgtccat ctcatcttcc agccggccga ggagggccgt ggcggcgccg
     4861 cggcgatggt caaggacggg ctgttcgaga agtttccctg cgagcagatc ttcggcatgc
     4921 acaaccggcc caagctcgat gtcggcaagt tcgccatccg ctccggcccg cagatggcgg
     4981 gcggcggcct gttcgacatc aagatcaccg gcaagggcgc gcatggcgcg cggcccgaaa
     5041 ccggcatcga tccggtgatc atcgccaccc agatcatctc ggccctgcag agcgtggtgt
     5101 cgcgcaacgt ggcgccgctc gattcggcgg tgatctcggt cacccagatg catgccggcg
     5161 acgcctacaa cgtgatcccg caggaggcgg tgctgcgcgg caccatccgc gccttccgca
     5221 aggagacgat ggcgctcatc aaggagcgca tcgagacgat ttccgccggt atcgccaaga
     5281 ccctgggcgg caaggccgag gccgacgtgc gcatcgcctt cccgccgctg gtcaacaaca
     5341 aggaggcggt gaaattcatc gccgacgtgg cggccgagat cgtcggcgag gacaacatga
     5401 accgcgaggg cccgttcgtc atggcctccg aggatttttc ctacatgctg gagaaggtgc
     5461 cgggcgcttt catcaatatc ggcaacggcg gcggcgaggg cggctgcgag gtgcacaatc
     5521 cgagctacga cttcaacgac gacatcatca ccttgggcgc cacgctgtgg tcgcgcgtcg
     5581 tcgagaggaa gctcgccaaa gatgcgcggt gacgatgagc caatcggttg atccggcgcc
     5641 gccggtcggc gtcaggccct ggctgcttcg cgacctgccc tatgcagcca tgctggcgct
     5701 tgcgctgggc ggtatcgtgc tcacgagctt ccgcggcccg acgacgtatt actactggat
     5761 ggcgctggcg ccgatctacg ggctgatcag catcgtttcg ggatggcgcc agctcgccac
     5821 gggtgccgag cgcatgaagc tggtgacaac ccaggcgctg cactggttgg ccttcctggc
     5881 ggcgatgtgg ctgatgttcc tcccccaggt gcgcggcgtc gtcaacgaca acgcgaccag
     5941 cctttccctg ctgatcctgc tcgccctcgg caccttcgtc gccggcgtgc acgccggtgt
     6001 gtggcggatc tgcgcggtcg gcgcctttct cgcagcgtcg gtgccggcgg tggcgtggat
     6061 ccaggaatcc accctgctgc tgctcgtcgg cgcgctgctg gttgtcgccg tcggcgcggc
     6121 gttctggtgg atgtggcgtc gcgaaagcgg gcgggcgtga tcatcctctg gatcgattat
     6181 gtcagcccct acgccttcgt cgccaaggca ggcgcctatg cgctggaggc cgattatgag
     6241 gtcgagctgc tgtggcgtcc ctacacgctc gacgtcgcct ccttcatggg cgcggtggaa
     6301 gagcgcgatc ctcatcattg gcgccgcgtg cgctacgcct acatggacgc gcggcgcttc
     6361 gccaacaagc agggcctgac gctcaaagga ccgaagagag tctactatgc gcggccggcc
     6421 aacgcgggca tgctctatgc ccagcggcac ggcgccttcc gccgctacaa cgacctcgcc
     6481 ttcgaccgct tctggcggcg cgagctcgat ccggaggatg tcgatgccgt ggccgcgctg
     6541 ctgggcgagg cgggcgcgcc gccgggcttc gcctcgttcc tgacgggaga gggcggcgcc
     6601 gagcacgatc gtcggcgcaa cgaggccgag gcgtcgggcg ttttcggtgt gccgaccttc
     6661 gtcttcgaag gcgagctgtt ctggggcggc gaccggatcg gcctgttgcg cgagcgactg
     6721 gacgagaaag gcgtgaaacg ccgccccgcc tgaaccgagg aggcggtcga tgaccaagtc
     6781 ggtgatgaag cccaggcgca aggcgaaact gccgctcgcg cccgccatgg aaccgcgcca
     6841 caagcgcacc ctgatcgtcg tcgccgacgg cgcccgtgcc cgcttcttcg agcccgacca
     6901 cgatgcccac acccttgtcc cggcccgcca ggccgacatg gtggcccccg acagccggcg
     6961 gctgacccac gacatcgtca ccgaccggcc cggccgcggc ttcagcgcgg cgcgcagcag
     7021 catgcgccac gccttcgaag cgccgcacga cgtccacaag ctcgaaaagc acaacttcac
     7081 cgccgcgctg gcgcaagcgc tggaggacgc ccgtgcccgc cggcagttcg atcgactggt
     7141 gctggtggcg ccgcgccgca gcctgggcga actgcgcgcg ctgctgtcgc ctcaggtaaa
     7201 gaagatcgtc agccacgaag tcgccaagga tctcacggcc tcgacgccgc agagcctgtg
     7261 gcgcgcgctg gaaaaggtcc tgccgacgcc cgtcctcgcc tagcctcagt ccggctggtc
     7321 gagcgtgcgg tcgatgcgct tgtgcagcgc cttgacctca tgccgcatga ccttggcgcg
     7381 gtcctgaagg cggcgccgtg cacgccggaa ggcatcggtg acggcgaaca acgggtcggc
     7441 gaagcgttca tcgaggccgg gcgtgcgatc gacgtcgacg gtgacgccgc cgggcatctt
     7501 gagatggacg gtgacctcgt agaggccgcc ggtgcggtga ttgccgtccg gcagcttgaa
     7561 gacgacgtgg caggccgtca tccggccgaa gaactgctcc agatggtcga cctgctcctc
     7621 gatcagcttc cggatggcgg cgctggaagg agtgttctga aaggtgatcc tgagcggcgt
     7681 gtgcatgcgg tccctccttc ttggccgtgc ccgtccaaac atgaacgcgc acggacggcg
     7741 gcaagttgcg ggctcagggc gcggtcttgg ccggcaggcc ctgggctgcg agatagctct
     7801 cgagcgtggc gctccacagc tgcggcgccg agccgatctg atggccggtc agcccctccg
     7861 gcggggtata atcatgaaac gcgcctttgc cgccggccgc ctggaaggcg gcaaaattcg
     7921 cgcggctgtg cggcagcgga tagaacgggt cgttgtcgcc gtagagccag atcgtcggct
     7981 ggccgtagac cgcgccgcgt ccgaacaggt cctggttgac ggtactcgca ctccagcaac
     8041 ccgtcccaag ccagccgcca acgaagttga tgacggcgcg cggcgtgccg ggctggcggc
     8101 cgctccaggc gaccgagagg atgccgccgc gagactggcc gccgacggcc accttgctgc
     8161 gatcgacgaa cggctgcgcc aggatcgccg gcgtgatggc gtcgatgtcg ccgagcgcac
     8221 ggtcggcgcc ggcgagcgaa atcgtttcct cgcaagtgta gcccttggcg cggccgagcg
     8281 aggagaaacc ctcgtcgtaa agaccctccg agccgccgcg gccgcgccgt gagggcaaca
     8341 ccaccgccca gccgcgcgcc gtgaaccagt tggccagcga tttgggatcg tagggccgtg
     8401 caaagagtga agggtcgaaa ccgcgcccgg tcgagccgtg atggaagatc agggtgggga
     8461 agggtcctgc gcctacgggt ttgtacgtga tggtcgcgag cttcaccgtc tcgccgtcga
     8521 cggtgacggg caccatcgcg cgttcctggg ccgcggccgg aagtgccgcg gcgagcaggc
     8581 cggcgataag gaagagcgag gttagtcgtt tgccgcgacc gccgccgcgc ttgcagcgcg
     8641 cgccggctgc accacgcgat ggctcaccat gcgatggtgc aaggaccgga tcgtgtcgct
     8701 tccccgcgtc aggcagagcc atggacagaa accatgcacg aaacaggcaa gcgcgccaac
     8761 cagcatgcgg ccgccgaagc tgaaggcggc tcccatgtgc tgcaggtagg tctcgttgac
     8821 ctgggcggga tggtcggtga agcggcgaaa catggtgccg attctagcga tccggccggg
     8881 aaacggcttg ctacctttgc gtcgcttgcg gcaaatttga gaaatccatt ccaaggaacc
     8941 acccatggcc gcaaaaacgt cgctcgactc cttcgacaag aagattctgg attgcctgca
     9001 ggacaattca gacatggccc tggccgagat cgcccgccgg gtcgggctgt cgaccacgcc
     9061 gtgctggcgg cgcatcaacc gcttgcagga ggtgggtgtc atccgcgccc gcgtggccct
     9121 cctggagcgc aaggcggtga atgccggcgt cacggtgttc gtggccgtgc gcactgccca
     9181 gcacaatgcc cagtggctcg gccgcttcgc caaggcggtg gcgtcgttcc ccgaggtcat
     9241 ggactgctac cgcatgagcg gcgagatcga ctacctgatc cgcctggcgc tgcccgacat
     9301 cgacgcctac gacgccttct acaagcgcct gatcgccaag atcgagctct ccgacgtcac
     9361 ctcgatgttc gccatggagg agatcaagtc caccacgcgg ctcccgctca gctacctccc
     9421 ttgacctcgc ttcctccccc gtcatacggg ggaggtggcc cgcagggccg gagggggaag
     9481 gccacccatt gccttccccc tccgccccct tcaggggcac ctcccccata agatggggga
     9541 ggagaagact ctagaagccg caggggaaac gatgaccacg ggcaagaacc gcaagaaagt
     9601 gctgatcgtc ggccgcatgc cgcaggccgg cattgacgtg ctgaagaagc gcgacgacgt
     9661 cgactacgag attctgaccg acgattcggt gccgtcgctg catgccaagc tcaaggacgc
     9721 caacgccgtg acgctgggcg gcacgccgtt ccgccaggcc gagctcgacg ccgcgccggg
     9781 catgatggtg gtggcgcgcc tcggcgtcgg cttcgactcg gtcgagatcc ccgcgctcaa
     9841 caagcgcaag atcccgctga tgaccaccgg catcgccaat tccgtgtcgg tggccgagca
     9901 tgcgatgtac atgctgctgg cctcggcgcg gctcacccgc aagcacgacc gcttcgtgcg
     9961 cgagaacgcc tggggccagc gcctgtcgga cctgccggcc gatctcgccg gcaagtcgat
    10021 cctggtggtc ggcatgggcc gcatcggctc gcgcacggtc aagcgctgcg tcgccttcga
    10081 gatggacgtc tacgtgctcg atcccaacat ctccgaggcc gacatcaaga aggccggcgc
    10141 caagaaggtc accgacctca aggcgatcct gcccaaggtc gatttcgcct cggtgcattg
    10201 ccccaagtcg cctgagacgg tgaacatgtt taacgccgag acgctggcgc tgatgaagcc
    10261 cgacgcgttc ctggtcaaca ccgcgcgcgg cggcatcatc aacgaggagg cgctctacaa
    10321 ggcgctgacc agcggcaagc tgcgcggcgc agggctcgac gtgctcgaca aggagccgcc
    10381 cgatccgacc aacaagctgt tcggcctcga caacgtgatc ttcagtccgc acatggccgg
    10441 cgtcaccaag gaggcgagcg atcgcatggc ggtcagcgcc atcgagaaca tcctcagcgt
    10501 cttcgacggc agggtgaatg ccgcccacgt cgtgaacaaa gaggtcttgt cgtagcgcac
    10561 cgctgtcatg acaaaggggt caggacgaca gaataccctc gatctcgtcg tcggtcggga
    10621 agcggccggt cttgctgcgg gtgtatttca gcgcgccgtc gacggtgacg tcgaactggc
    10681 cggatttgcc ggggcgcagt tcgatctcgg cggcgcccag tctttcgagg cgttccctca
    10741 cacggagggc ctgcggctta taacctcaag caccgcaata ttcgatcagg actttcatgc
    10801 catcaaggtg ggggcttaag ctcgcgccag caagggggat atcgcgatga agtacggacc
    10861 gctgggccgc tcgggcctga tcgtcagccg catctgcctg ggcggcaatt cgtggggcgc
    10921 caagggccgc cgaggctggg gcaagttcga cgaggccgag gcgccggcct atttcaagcg
    10981 cgcgctcgat gtcggcatca atttcttcga caccgccgac aactacaatt tcggccgctc
    11041 cgaggagatc atgggcggca cgctcatgaa gatggtgaag cgcgaggaca tcgtgctgtc
    11101 gaccaaggtc ggcatccgcc agagcccggt ggcgaatgat gtcggcaccg gccgcaagca
    11161 tctcatggcc tcgatcgacc agcagctcaa gcgcctgcag accgactata tcgacgtcta
    11221 ccaggtccat cggctcgacc cgcacacgcc gatggaagag accatgtact cgctcgacca
    11281 gctcgtgcgc tcgggcaagg tccgctacat cggcggctcg accatgccgg cctacaagtt
    11341 cgcccagatg gtgatgatcg ccgactggaa gggctatgcg cggccgattg ccatgcagaa
    11401 cctttacaac atgatccagc gcgaggaaga gcgcgagatg aaccggctgt gccacgagca
    11461 gggcgtcggt ctcatcccct attcgccgct ggcgcgtggc ttcctcgcgg ccaaccgcag
    11521 caaggaaggc ggcggcgcca ccgagcgcgc caagaacgac gcccaggttc aggccggcac
    11581 ctatcgtgac tgcgactggg agatcgccga gcggctgaag aaggtcgcgg ccggaaagaa
    11641 tgcgtcgccc gcgcaaaccg cgctcgcctg gctgctcagc aagccctaca tgggctcgcc
    11701 catcatcggc gccaccagcc tcgaccagct cacgtcggct gcccaggcga cggagttcgc
    11761 gatcacgccg gacgaagcga agatgctcga ggagccctat cagttccgcg tttcgccgat
    11821 gaactgacgc tacttgagcg agttctgttt cgacagaatc acctcaccct gaggagcgca
    11881 cgaagtgcgc gtctcgaagg gtgggcaacg agaaggtcgg tggcccacct ca
//
LOCUS       DASWGA010000067        11349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2413755, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000067 DASWGA010000000
VERSION     DASWGA010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 11349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11349
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2413755"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..600)
                     /locus_tag="VF991_01475"
     CDS             complement(<1..600)
                     /locus_tag="VF991_01475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9555132.1"
                     /translation="MNPTIQQLAADLANGRTTSRKLTEEALARIKDPKGEGERAFIRV
                     WPSQALAAAEACDLLRREGLVASPLAGIPVSIKNLCDVKGETTLAGSIVLKQQSIATQ
                     DAPVVARLRAAGAVVVGSTNMSEFAFSGVGFNPHYGTPGNPADRKRVPGGSSAGAAVS
                     VADRMAVAALGTDTGGSVRIPAAVCGIVGFKPTARRVPID"
     gene            complement(597..2534)
                     /gene="acs"
                     /locus_tag="VF991_01480"
     CDS             complement(597..2534)
                     /gene="acs"
                     /locus_tag="VF991_01480"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEX9555133.1"
                     /translation="MADELIDVSPDWARRAYVDEAKYKAMYEASTTDPAGFWGEHGKR
                     IDWIKPYSPGAVRDVDYTGNVRIRWYHDGVLNVSANCVDRHLAKRADQTAIIWEGDDP
                     AKSKHITYRELHAQVCRMANALKELGVKKGDRVTIYLPMIPEAAYAMLACARIGAIHS
                     VVFGGFSPDSLANRIVDCDSNIVITADEGLRGGKPVPLKANTDEALTKAPGVTKVLVV
                     RHTGGKVAWDTGRDVWWHDIAAKVPADCAPEPMGAEDPLFILYTSGSTGKPKGVLHTT
                     GGYLVFASMTHQYVFDYHDGDVFWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNY
                     PDSSRFWQVIDKHKVNIFYTAPTAIRALMREGEAPVKKATRKSLKLLGSVGEPINPEA
                     WLWYYRVVGDSRCPIVDTWWQTETGGILITPLPGATRLKPGSASRPFFGVQPVMVDAE
                     GKELQGPATGNLCLINSWPGQMRTVYGDHQRFIDTYFKTYPGKYFTGDGARRDADGYY
                     WITGRVDDVINVSGHRIGTAEVESALVGNQKVAEAAVVGYPHDIKGQGIYAYVTLKTG
                     QQSSDALRKELVAWVRKEIGPIATPDVIQWAPGLPKTRSGKIMRRILRKIAENDFGNL
                     GDTSTLADPAVVDDLVKNRAK"
     gene            complement(2577..3779)
                     /locus_tag="VF991_01485"
     CDS             complement(2577..3779)
                     /locus_tag="VF991_01485"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HEX9555134.1"
                     /translation="MSPASRTNLRLATVFCGIVGLYDALYVIFELSGGPRIGLASDAL
                     PDFLVFHAAARAFFEGKLALIYDVDAFTRYQTENYSELIASTTLFRPFLYPPTWLLML
                     LPFGLMAAVRAYAVFMSVTAVAATAMEGRRNLWDWLAVITSPAAVWVVLAGQNTFFSL
                     ALLYGGLRLLDRAPAAAGLLLGLLSYKPQILVLVPLALLAARQWQALAWTLGTAATLS
                     LASAVLFGFDLWLAFFDMVREAGSPQIADQMFGRIFMQMTTLLAAARILGLPPAVAGA
                     IQLAGALLAIAAVWHAFRHHGSSNARTAVLVTATFLISPYTLNYDLLLLMPVVAALFR
                     QASVRGLYPGERLIDVALWLIPTLCIMLNPAGLPVTPLIILAFGAIAWARLEAQPKVE
                     LPGTATAG"
     gene            complement(3776..4447)
                     /locus_tag="VF991_01490"
     CDS             complement(3776..4447)
                     /locus_tag="VF991_01490"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016657 - obsolete oxidoreductase
                     activity, acting on NAD(P)H, nitrogenous group as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEX9555135.1"
                     /translation="MRVSEAVNTRHSMRVFKPDPVPRADIEWIIGTASRAASNGNLQP
                     WKLYITMGKARQRLSTAILEAMDDGDSGPGGEYDVYPKEFTPAYDARRKLVGKQLYTL
                     LGVPRGDAAGMLKQFRKNYDFFDAPVGMILCIERRMGGGQWIDCGIFLDQLMLLAREK
                     GLHTCPQAAFSRYQHVVRRELKIPDDQIVICGLALGHADPDAVPNNLITERAPLQDFT
                     TWYGE"
     gene            complement(4454..5575)
                     /locus_tag="VF991_01495"
     CDS             complement(4454..5575)
                     /locus_tag="VF991_01495"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9555136.1"
                     /translation="MRPRPSFAGAAIEVSDLGRSVAFHRVWLPMLGFRRVWAGPDRVM
                     WSRGYDHFVMRQAKDGVSYGPGALWLAVSAESRAQVDQVYAELRDAGAQILQPPQELD
                     YFAPGYYSVGFRDPDGVPIEVVHRWDELPDLADAEQVHVPGHGVSLGGYFFKPQAGTP
                     PYPALILLHGFAGHAHNMAGLARAASANGYAALALSLRGWLGSEGESDQGLRQPLDVL
                     AAIDWLAKRPLVDRDRLALVGASMGGQVALLAAAHKPPVRAIASFFAPTDLARWRAAN
                     PFIRDYLDDLCGPEGLPVRSPILRVAQIEVPVLLIHGDRDENVPVAQTLAMAEALKGH
                     GKDVETFIVQSGTHYFTEQQNALARRKLFDFLRRHLNRS"
     gene            complement(5575..6126)
                     /locus_tag="VF991_01500"
     CDS             complement(5575..6126)
                     /locus_tag="VF991_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9555137.1"
                     /translation="MATRLAGHFVAMAGNNAWANHRLLSACEALAPQDFAAPRTGFFP
                     SLRATFNHILWVDQYYIDALEGLDALRRYSEPAPDFADARSMRLAQTASDKRLIAFCE
                     RQTDEMLARNCVLPRPNRTPPPSSVEAVLAHLLQHQIHHRGQAHAMLSGTSIKPPQLD
                     EFFLAGEEHLRREELSALGLTEA"
     gene            complement(6138..8825)
                     /gene="acnA"
                     /locus_tag="VF991_01505"
     CDS             complement(6138..8825)
                     /gene="acnA"
                     /locus_tag="VF991_01505"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEX9555138.1"
                     /translation="MAAAHPNSFKARKTLKVGSRSYGYFSLKAVEKQIGDLSRLPFSL
                     RVLMENLLRHEDGTTVKKNDIEAFADWLKNGGRSVKEINFRPARVLMQDFTGVPAVVD
                     LAAMRDAMGPLGGDARKINPLVPVDLVIDHSVIVDNFGNSSAFGANVKLEYERNLERY
                     QFLRWGQMAFDNFRVVPPGTGICHQVNLEYLAQVVWTKKDGKETLAYPDTLVGTDSHT
                     TMVNGLSVLGWGVGGIEAEAAMLGQPLPMVIPDVVGFKLTGKLPEGATATDLVLTVTA
                     MLRKKGVVNKFVEFYGDGLDEMPLANRATISNMSPEYGATCGFFPIDAVTLSYLRTTN
                     RGQAAKLVEAYAKKQGLWRSKKSPEPVFTDTLSLDLGDVEPSLAGPKRPQDRVPLSQA
                     ARQFVANIEKEFDRKDDGKRIKCAGTDYDLGHGDIVIAAITSCTNTSNPYVMLGAGLI
                     ARNAVKYGLKVKPWVKTSLAPGSQVVTEYLEASGLQKDLNKIGYNLVGYGCTSCIGNS
                     GPLPDPVSKAVADADLVVCAVLSGNRNFEGRVNPLTRANYLASPMLVVCYALAGSMKI
                     DITKDPIGTGKNGKPVYLKDIWPSNMEVQKLVDKFVTAKAFKKRYADVFKGDKFWRSI
                     KTKPSLTYAWDDKSTYVRNPPYFDGMGKVPGGLSNIQGARPLGQFGDSITTDHISPAG
                     SIKKDGPAGDYLLEHGVQPKDFNQYGTRRGNHEVMMRGTFANIRLKNEMVPGIEGGFT
                     HDYRSDEPVPIYDVAMRYKKEHTPQILIAGKEYGTGSSRDWAAKGVNLLGVKAVVCET
                     FERIHRSNLVGMGVLPLQFKDGMTRKTLNLTGWETFDVGGIDGGLKPGMDVPLTIHRR
                     DGISETVTLTCRIDTAEEVEYFKNGGVLHYVLRNLAHAA"
     gene            8983..9936
                     /locus_tag="VF991_01510"
     CDS             8983..9936
                     /locus_tag="VF991_01510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9555139.1"
                     /translation="MTVSAEAVAQRNAVESWDPSAREFGRPTIDPSVPADARNSTLDA
                     LNKILSSPKLSAFDRSIYLSIRAYQLSRLGREADSQKDIAEMGKVLPAAWPLVLSGTV
                     PELAGGGDRAAALRTLDSALQRKPGDSWLVIAQAQVYMQIADFQRALGLLDDALAGAT
                     SPADRRTALYYRGHANFNLGRYAEAADDFDASLAGRTTLKARLGPLLWRYAAQVRAKR
                     DARTALAKTIGQETLEEWPGPIVKFLLGKIGAGELAVVAESDDAAKRANGKCPAALFM
                     GMDALRRGDRQRAREQLQLAQARCPTVSELNWAASSELKRL"
     gene            complement(10058..10324)
                     /locus_tag="VF991_01515"
     CDS             complement(10058..10324)
                     /locus_tag="VF991_01515"
                     /inference="COORDINATES: protein motif:HMM:NF016370.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEX9555140.1"
                     /translation="MDKVSRARELRRDGSRAEKICWHLLRDRRINGVKFRRQHPIGPY
                     FADFACLSRKLVIEIDGDHHAFQVEADTRRTAAMEREGWRILRF"
     gene            complement(10397..11224)
                     /locus_tag="VF991_01520"
     CDS             complement(10397..11224)
                     /locus_tag="VF991_01520"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9555141.1"
                     /translation="MAASPGYICGVTAADQLIDLDDRRLRTRHLSPRQSDGLERTTLI
                     FLHEGLGCIEMWRDFPQTLCDATRCAGIVYDRTGYGGSSPWPADPGVRYMEIEADDVL
                     PRLLAKLDIEDCVLVGHSDGGTIALNYAAADPEPLRAVVTLAAHAINEAVCVKAIRQA
                     REAFAAGDLRQRLQKYHGDNTDGAFRLWSDAWLAPGFEPMDADSRLPRVVVPVQATQG
                     EDDEYGSELQLGIIAGKVGGYCETRLVPDCGHSPHLQQPAYVLSEITRFVAPLALVG"
BASE COUNT         1867 a         3638 c         3885 g         1959 t
ORIGIN      
        1 atcgatcggc acgcgccgcg cggtcggctt gaagccgacg atgccgcaca cggcggcggg
       61 gatgcgcacc gaaccgccgg tatcggtgcc cagcgccgct acggccatgc ggtcggcgac
      121 cgacacagcc gctcccgccg atgagccgcc cggtacccgc ttgcggtcgg ccgggttgcc
      181 tggcgtgccg taatgcggat tgaagccgac gcccgagaag gcgaactcgc tcatgttggt
      241 gctgccgacg accaccgcgc ccgccgcgcg caggcgcgcc accacaggtg cgtcctgagt
      301 ggcgattgac tgctgcttga ggacgatgga gcccgcgagc gtcgtctcgc ccttcacatc
      361 gcagagattt ttgatcgaga ccgggattcc ggcgagcggc gaggcgacga ggccctcgcg
      421 gcgcaagagg tcgcacgctt cggcggcggc cagcgcctgg ctgggccaca ctctgatgaa
      481 ggcgcgctcg ccttcgccct tggggtcttt gatgcgggcg agcgcttctt cggtgagctt
      541 gcgcgacgtg gtgcggccgt tggccaggtc cgcggcgagt tgctggatcg tcgggttcac
      601 ttggcgcggt tcttcacgag gtcgtcgacg acggcgggat cggccaaggt cgaggtgtcg
      661 ccgaggttgc cgaagtcgtt ctcggcgatc ttgcgcagga tgcggcgcat gatcttgccc
      721 gagcgggtct tgggcaggcc gggcgcccac tggatgacgt cgggcgtggc aatcggcccg
      781 atctccttgc gcacccaggc gaccagctcc ttgcgcagcg cgtcggacga ttgctggccg
      841 gtcttcaggg tgacgtaggc gtagatgccc tgacccttga tgtcgtgcgg gtagcccacg
      901 acagcggcct cggccacctt ctggttgccg accagggcgc tttcgacctc ggcggtgccg
      961 atgcgatggc ccgagacgtt gatcacgtcg tcgacccgac cggtgatcca gtagtagccg
     1021 tccgcgtcgc ggcgcgcgcc gtcgccggta aaatacttgc cggggtaggt cttgaagtag
     1081 gtgtcgatga agcgctggtg atcgccatag accgtgcgca tctgtcccgg ccaggaattt
     1141 atcaggcaga gattgccggt ggccgggccc tgcagctcct tgccctcggc gtcgaccatg
     1201 accggctgca cgccgaagaa cggccggctg gccgagccgg gttttagccg ggtggcgccg
     1261 ggcagcggcg tgatcaggat gccgccggtc tcggtctgcc accaggtgtc gacgatcggg
     1321 cagcggctgt cgccgaccac gcggtagtac cacagccacg cctcgggatt gatcggctcg
     1381 ccgaccgagc ccagcagttt tagactcttg cgcgtcgcct tcttcaccgg cgcctcgccc
     1441 tcgcgcatca gggcgcggat ggcggtgggc gcggtgtaga agatgttgac cttgtgcttg
     1501 tcgatcacct gccagaagcg gctggaatcg ggatagttgg gcacgccctc gaacatcagc
     1561 gtggtcgcgc cgttggccag cggaccgtag acgatgtagc tgtggccggt cacccaaccg
     1621 acatcggcgg tgcaccagaa gacgtcgccg tcgtgatagt cgaagacgta ttggtgcgtc
     1681 atcgaggcga acacgaggta gccgcctgtc gtgtgcagca cgcccttggg cttcccggtc
     1741 gagcccgagg tgtagaggat gaacagcgga tcttccgcgc ccatcggctc gggcgcgcag
     1801 tcggccggca ccttggcggc gatgtcgtgc caccagacgt cgcggccggt gtcccaggcg
     1861 accttaccgc cggtgtggcg cacgaccagc accttcgtga cgcccggcgc tttggtcagc
     1921 gcctcgtcgg tgttggcctt gagcggcacc ggcttgccgc cgcgcaggcc ctcgtcggcg
     1981 gtgatgacga tgttgctgtc gcagtcgacg atgcggttgg ccaggctgtc gggcgagaag
     2041 ccgccgaaca cgacggagtg gatggcgccg atgcgcgcgc aggcgagcat cgcataggcc
     2101 gcctcgggga tcatcggcag gtagatggtg acccgatcgc cttttttgac gccaagctcc
     2161 ttgagcgcat tggccatgcg gcagacctgg gcgtgcagct cgcggtaggt gatgtgcttg
     2221 gatttggccg gatcgtcgcc ttcccagatg atcgcggtct ggtcggcgcg cttggccagg
     2281 tgccggtcga cgcagttggc cgacacgttc aacacgccgt cgtgatacca acggatgcgg
     2341 acgttgccgg tgtaatcgac gtcgcgcacc gcgcccgggc tataaggctt gatccagtcg
     2401 atccgcttgc cgtgttcgcc ccagaatccg gcgggatcgg tggtcgaggc ctcgtacatc
     2461 gccttgtact tggcctcgtc gacataggcg cgcctggccc aatcggggct gacgtctata
     2521 agttcatcgg ccatggcttc ctcccgcccg catttttcca gcgaattgag ggggttttag
     2581 cccgccgtcg ccgttcccgg caattcgact ttgggctggg cttcgaggcg cgcccaagcg
     2641 atcgctccaa atgccagaat tatcagcggt gtgactggca ggccggccgg attgagcatg
     2701 atgcataagg tcgggatcag ccacagcgcg acatcgatca gtcgctctcc gggatacaaa
     2761 cctcgcaccg aggcttggcg gaacaaggcc gccaccaccg gcatcaggag caggagatcg
     2821 tagttcaacg tatagggtga aatcaggaac gttgccgtga ccagcacggc cgtgcgtgca
     2881 ttgcttgacc cgtggtgacg aaaagcgtgc cataccgcgg caatggcaag gagcgcgcct
     2941 gcgagttgga tcgcccccgc gaccgcggga ggcagaccaa gaatacgcgc ggcagcaagc
     3001 agcgtcgtca tctgcatgaa gattcgtccg aacatctggt cggcgatctg cggcgaacct
     3061 gcctcacgca ccatgtcgaa gaaggcgagc cagaggtcga aaccgaacag gacggcgctc
     3121 gcgagcgaaa gcgtcgccgc ggtgccaagc gtccaggcga gcgcttgcca ttgccgcgcg
     3181 gccagcagag ccagcggcac caagaccagg atttgcggct tgtagctcag cagtccaagc
     3241 agcaggccgg cggctgcagg agcgcggtcg agcaggcgaa ggccgccata gaggagagcg
     3301 agactgaaga aggtgttttg gccagcaagg accacccaaa ccgccgccgg cgaggtgatg
     3361 acggcaagcc aatcccaaag attgcgacgt ccttccatgg ccgttgccgc cacggccgtc
     3421 acggacatga agaccgcgta ggccctgacg gctgccatca gaccgaaggg cagcagcatc
     3481 agaagccacg tcggcggata aaggaacggc cggaaaagcg tcgtcgaggc gatcagttcg
     3541 gagtagttct cggtctgata gcgcgtaaag gcgtcgacgt cgtagataag cgctagcttg
     3601 ccctcgaaga aagcccgtgc cgccgcatgg aaaaccagga agtccggaag ggcgtcgctg
     3661 gcgagcccga ttcgcgggcc gccagacaat tcgaagatga cgtagagcgc gtcatacaat
     3721 ccgacgatgc cgcagaatac cgtggcgagg cgaaggttcg tccgggacgc tggactcatt
     3781 cgccatacca ggtcgtgaag tcctgcaacg gcgcgcgctc ggtgatcagg ttgttgggca
     3841 cggcgtcggg atcggcgtga ccgagcgcca ggccgcagat cacgatctgg tcgtcgggga
     3901 ttttgagctc gcggcgcacc acgtgctggt agcggctgaa agcggcctgc gggcaggtgt
     3961 gcaggccctt ctcgcgcgcc agcagcatga gctggtcgag gaagatgccg cagtcgatcc
     4021 actgcccgcc gcccatgcgc cgctcgatgc acaggatcat gccgaccggc gcgtcgaaga
     4081 aatcgtagtt cttgcggaac tgctttagca tgccggccgc atcgccgcgc ggcacgccga
     4141 gcagggtgta gagctgcttg cccaccagtt ttcggcgcgc gtcataggcc ggcgtgaatt
     4201 ccttgggata gacgtcgtat tcgccgccgg ggccgctgtc gccgtcgtcc atcgcctcca
     4261 ggattgccgt cgacaggcgc tgccgcgcct tgcccatggt gatgtagagc ttccacggct
     4321 gcaaattgcc gttcgacgcg gcgcggctcg ccgtgccgat gatccattcg atatcggccc
     4381 gcggcacggg gtccggcttg aagacccgca tcgagtgacg ggtgttgacc gcttcggaca
     4441 cgcgcatgga cgactagctc cgattgagat ggcggcgcag gaagtcgaac agcttacgcc
     4501 gggccagcgc attctgctgc tcggtgaagt agtgcgtacc gctctgcacg atgaaagttt
     4561 cgacgtcctt gccatgtcct ttgagcgcct cggccatggc gagcgtctgg gcgaccggga
     4621 cgttctcgtc acggtcgcca tggatcagca gcaccggcac ctcgatctgc gccacccgaa
     4681 ggatcggcga gcgcaccggc aatccctccg gcccgcacag gtcgtcgaga tagtcgcgga
     4741 tgaacgggtt ggccgcgcgc cagcgcgcca ggtcggtcgg ggcgaagaac gaggcgatgg
     4801 cccgcaccgg cggcttgtgg gcggcggcga gcagcgccac ttggccgccc atcgaggcgc
     4861 cgaccagcgc cagccggtcg cggtcgacca gcggccgctt ggccagccag tcgatcgccg
     4921 ccagcacgtc gagcggctgg cgcaggccct ggtcgctttc gccttccgag ccgagccagc
     4981 cgcgcagcga caaggccagc gcggcatagc cattggccga ggccgcccgc gccagccccg
     5041 ccatgttgtg ggcgtggccg gcgaagccgt gcagcaggat cagcgccgga tagggcgggg
     5101 tgccggcctg cggcttgaag aagtagccgc cgaggctgac gccgtggccg ggcacgtgga
     5161 cctgctcggc gtcggcaagg tcgggcaact cgtcccagcg gtgcacgacc tcgatcggca
     5221 cgccgtcggg atcgcggaag ccgaccgaat agtagcccgg cgcgaaatag tcgagttcct
     5281 ggggcggctg caggatctgc gccccggcgt cgcgcagctc ggcatagacc tggtcgacct
     5341 gggcgcggct ttcggccgac accgcgagcc acagcgcgcc cggaccgtag gacacgccgt
     5401 ccttggcctg gcgcatgacg aaatggtcgt agccgcgcga ccacatcacg cggtcggggc
     5461 cggcccacac gcgacggaag cccagcatgg gtagccagac gcgatggaag gccaccgagc
     5521 gcccaaggtc gctgacctcg atcgcggcgc cggcgaagga cggacgcggc cgcatcaggc
     5581 ctcggttagg ccgagcgcgc tcagctcctc gcgtctcagg tgctcttcgc ccgccaggaa
     5641 gaactcatcg agctgcggcg gcttgatcga tgtgccgctc agcatggcgt gggcctggcc
     5701 gcgatggtgg atctggtgtt gcaggagatg ggccagcacg gcttcgacgc tcgacggcgg
     5761 tggcgtgcgg ttggggcgtg gcaggacgca gttgcgcgcc agcatctcgt cggtctggcg
     5821 ctcgcagaag gcgatcaacc ttttgtcgct cgccgtttgc gccagccgca tcgaacgggc
     5881 atcggcgaag tccggcgcgg gctcgctata acgcctaagc gcgtcgagcc cctccagcgc
     5941 gtcgatgtaa tattgatcga cccacaggat gtggttgaag gtggcgcgca gcgagggaaa
     6001 gaagccggtg cgcggcgccg cgaagtcctg cggggcgagc gcctcgcagg cgctgagcag
     6061 ccggtgattg gcccacgcat tgttgccggc catggcgacg aaatggccgg ccagcctcgt
     6121 cgccatggtc gcctcgctca ggccgcgtgc gccaggttgc gcagcacgta gtgcagcacg
     6181 ccgccgttct tgaaatactc gacctcctcg gcggtatcga tgcggcaggt cagcgtcacc
     6241 gtctcgctga tgccgtcgcg gcgatggatg gtgagcggca cgtccatgcc gggcttcagt
     6301 ccgccgtcga tgccgccgac gtcgaaggtc tcccagccgg tgaggttgag cgtcttgcgc
     6361 gtcatgccgt ccttgaactg caacggcagc acgcccatgc cgaccaggtt cgagcggtgg
     6421 atgcgctcga aggtctcgca caccacggcc ttcacgccca gaaggttgac gcccttggcc
     6481 gcccagtcgc gcgagctgcc ggtgccgtat tccttgccgg cgatcaggat ctgcggcgtg
     6541 tgctccttct tgtagcgcat cgccacgtcg tagatcggca ccggctcatc cgagcggtag
     6601 tcgtgggtga agccgccctc gatgccgggc accatctcgt tcttcagccg gatattggcg
     6661 aaggtgccgc gcatcatcac ctcgtgattg ccgcgccgcg tgccgtactg gttgaagtcc
     6721 ttgggttgca cgccgtgctc gagcaggtag tcgccggccg ggccgtcctt cttgatcgag
     6781 ccggcgggcg agatgtggtc ggtcgtgatc gaatcgccga attggccgag tggccgggcg
     6841 ccctggatat tggagagccc gcccggaacc ttgcccatgc cgtcgaagta gggcggattg
     6901 cgcacgtagg tcgacttgtc gtcccacgca taggtcaggc tgggcttggt cttgatgctg
     6961 cgccagaact tgtcgccctt gaacacgtcg gcgtagcgct tcttgaacgc cttggcggtg
     7021 acgaacttgt cgaccagctt ctggacctcc atgttcgacg gccagatgtc cttgaggtag
     7081 accggcttgc cgttcttgcc cgtgccgatc ggatccttgg tgatatcgat cttcatcgag
     7141 ccggccagcg cgtagcacac caccagcatc ggcgaggcga gatagttggc gcgggtcagc
     7201 gggttgacgc ggccctcgaa gttgcggttg cccgacaaca ccgcgcagac cacgaggtcg
     7261 gcatcggcga ccgccttgga taccggatcg ggcagcggac ctgaattgcc gatgcagctg
     7321 gtgcagccgt agcccaccag gttgtagccg atcttgttga ggtccttctg caggcccgag
     7381 gcctcgagat attcggtcac cacctgcgag cccggcgcca gcgaggtctt cacccacggc
     7441 ttgaccttga gcccgtactt caccgcgttg cgcgcgatca ggccggcgcc cagcatgaca
     7501 taggggttcg aggtgttggt gcaggaggtg atggcggcga tcacgatgtc gccatggccg
     7561 agatcgtagt ccgtgcccgc gcacttgatg cgcttgccgt cgtccttgcg gtcgaactcc
     7621 ttctcgatgt tggcgacgaa ctgccgggcc gcctgagaca gcggcacgcg atcctgcggc
     7681 cgcttggggc cggcgaggct cggctcgacg tcgccgaggt cgagcgaaag cgtgtcggtg
     7741 aagaccggct cgggggactt cttcgaacgc cacaggccct gcttcttggc ataggcctcg
     7801 acgagcttgg cggcctggcc gcggttggtc gtcctgaggt agctgagcgt caccgcgtcg
     7861 atcgggaaga agccgcaggt cgcgccatac tccggcgaca tgttggaaat ggtggcgcgg
     7921 ttggcgagcg gcatctcgtc gagcccatcg ccgtagaatt cgacgaactt gttgaccacg
     7981 cccttcttgc gcaacatcgc cgtgacggtg agcaccaggt cggtcgccgt cgcgccctcg
     8041 ggcaatttgc cggtgagctt gaagcccacg acatcgggga tcaccatcgg cagcggctgg
     8101 ccgagcatcg ccgcctcggc ctcgatgccg ccgacgcccc agcccagcac gctcaagcca
     8161 ttgaccatcg tggtgtggct gtcggtgccg accagcgtgt cgggataggc cagcgtctcc
     8221 ttgccgtcct tcttggtcca cacgacctgg gccaagtact cgaggttgac ctggtggcag
     8281 atgccggtgc ccggcggcac gacgcggaaa ttgtcgaacg ccatctggcc ccagcgcagg
     8341 aactggtagc gctcgagatt gcgctcgtat tcgagcttca cgttggcgcc gaaggcgctg
     8401 gaattgccga aattgtcgac gatcaccgaa tggtcgatga caaggtcgac cggaaccagc
     8461 gggttgatct tcctggcatc gccgcccagc gggcccatgg cgtcgcgcat ggcggcgagg
     8521 tcgaccaccg ccggcacgcc ggtgaaatcc tgcatcagca cacgggccgg ccggaaattg
     8581 atctccttga ccgacctgcc gccgttcttc agccagtcgg cgaaggcttc gatgtcgttc
     8641 ttcttgaccg tcgtgccatc ttcgtgacgg agcaggtttt ccatcaggac gcgcaaggaa
     8701 aacggcaggc gggagagatc gccgatctgc ttctcgaccg ccttgaggct gaaatagcca
     8761 tagctccggc tgccgacctt gagcgtcttg cgggccttga aactgttggg atgggcggcg
     8821 gccattgttg gtactcctca aggtcgattt gcgcggggtg agtggcaaaa taggggcatg
     8881 gaccgggcga ggcaatcggc ggatgcgagt gcttggccgt tgtgccagat tgccgatatg
     8941 cgacgcgaaa tagcttgggc gatcggggct tttgcagccg tcgtgacggt ctcggcggag
     9001 gccgttgcgc agcgcaatgc cgtcgagtcg tgggacccat cggcgcgtga gttcggccga
     9061 cccacgatcg atccaagcgt tcccgccgac gcacgcaaca gcacgctcga cgccctcaac
     9121 aagattctgt cgagtcccaa gctctcggcc ttcgaccgtt cgatctacct cagcatccgt
     9181 gcctatcagt tgagccgact gggccgcgag gccgatagcc agaaagacat cgccgaaatg
     9241 ggcaaagtcc tgcccgcggc gtggccgttg gtgctgtcag gcaccgtgcc agaactggct
     9301 ggcggcggcg atcgggcggc ggcgctgcgc acgctcgaca gcgcgctgca gcgcaagccg
     9361 ggcgattcct ggctggtgat cgcccaagcc caggtctaca tgcagattgc cgatttccag
     9421 cgcgcgctcg gcctgctcga cgacgcgctg gccggcgcca cctcgcccgc cgatcggcgc
     9481 acggcgctct actatcgcgg tcacgccaat ttcaatctcg gccgctacgc cgaggccgcc
     9541 gacgatttcg acgcctcgct ggccggccgc accacgctca aggcgcggct ggggccgctt
     9601 ctgtggcgct atgccgcgca agtccgcgcc aagcgcgacg cgcgcaccgc gctcgccaag
     9661 acgattggcc aggagactct cgaagaatgg cccggcccga tcgtgaagtt cctgctcggc
     9721 aagattggcg ccggcgagct cgcggtcgtg gccgaatcgg acgacgccgc caagcgcgcc
     9781 aacggcaagt gcccggcggc cctgttcatg ggcatggatg cgttgcgccg cggcgacagg
     9841 caacgggcgc gcgaacagct ccagctcgcc caggcgcgct gtcccaccgt gtccgagctc
     9901 aactgggccg cctcgagcga gctcaagcgg ctttagcccc tcatgctcct ctcccccgct
     9961 agggggagag gttgggtgag ggggttacag acgaatcgct cagcgcgatt tcaatcgctg
    10021 accaaatgcc ctctggattc tggacgactt cgttcgctca gaaacgcagg atacgccagc
    10081 cttcccgttc cattgcggcg gtgcgacgcg tatctgcctc gacttgaaac gcgtgatgat
    10141 cgccatcgat ctcgatgacg agcttcctgg ataggcaagc gaagtcggca aagtacgggc
    10201 cgatcgggtg ctgccgccgg aacttgacgc cgttgatccg ccggtcacgg agtagatgcc
    10261 agcagatctt ctcggctcgg ctcccgtcgc gtcgcagttc gcgggctctt gagaccttgt
    10321 ccataccccc tcacccagcc tctcccccta gcgggggaga ggagcatgat ggtgaaaaga
    10381 aagggcaaga atttgactaa ccgaccagcg ccagcggcgc cacgaagcgg gtgatctcgg
    10441 acaggacgta ggccggttgc tgcaggtgcg ggctgtggcc gcagtcgggc accaggcgcg
    10501 tctcgcagta gccgccgacc ttgccggcga tgatgccaag ctgcagttcg ctgccgtatt
    10561 cgtcgtcctc gccctgggtc gcctgcaccg gcacgacgac tcgcggcagc cggctgtcgg
    10621 catccatcgg ctcgaagccg ggcgccagcc aggcgtcgga ccatagacgg aaggcgccgt
    10681 ccgtattgtc gccgtggtat ttctgcaggc gttggcgcag gtcgcccgcg gcaaaggcct
    10741 cgcgcgcctg gcggatggct tttacgcaga ccgcttcgtt gatggcgtgc gccgccagcg
    10801 tcaccaccgc gcgcagcggc tcgggatcgg cggcggcata gttgagcgcg atcgtgccgc
    10861 catcgctgtg gccgaccagc acgcaatcct cgatgtcgag cttggccagc aggcgcggca
    10921 ggacgtcgtc ggcctcgatc tccatgtagc ggaccccggg gtcggccggc cacgggctcg
    10981 agccgccgta gccggtgcgg tcgtagacga tgccggcgca gcgcgtggcg tcgcaaagcg
    11041 tctgcgggaa atcccgccac atctcgatgc agcccagccc ttcgtgcagg aatatcagcg
    11101 tcgtgcgttc cagtccgtcg ctctgccgcg ggctgaggtg gcgcgtccgc aggcggcggt
    11161 cgtcgagatc gatcaattgg tcggcagcag tcacgccgca gatgtaaccg ggactcgccg
    11221 ccatgagaag gtgccgagca tcgccggcag cacggtgagg aacagtatgg gcgccagcag
    11281 catgccgccg accacgacag tggcgagcgg ccgctggacc tggctgccga tcgccgtcga
    11341 gaaggcggc
//
LOCUS       DASWGA010000068         1772 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1780160, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000068 DASWGA010000000
VERSION     DASWGA010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1780160"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..1308
                     /locus_tag="VF991_01525"
     CDS             145..1308
                     /locus_tag="VF991_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9555142.1"
                     /translation="MFNRSLILLPLLAAALAGCKPENKFQPPPPAEISVAVPLQQQVQ
                     PYEVLTGNTAAFNTVDLVARVEGFLSSINYTDGGFVKKGDLLFLIEQTMYKAKVKEAE
                     ASLDSAKAQLLNAEAEFTRQETLLRQNVTAQNTYDQAKAKRDSARANVESQEGNLTVA
                     QTNLGYTSVTAPFDGIVTRHLVSVGELVGNGVATKLATIIQLDPIYVTFNMSEQDVLQ
                     IRENMAQRRLSLEELAKIPLDIGLMDEEGFPHHGFLNYVSPEIDPATGTILVRGLFKN
                     PDRDLLPGFFARIRVPTALGSKAALLIPNRLVAEDQAGKYVLVVNKDNVVEQKRIVTG
                     QLLVGGLRVITSGLAADDRVVLSTNGKAIPGSKVVPKESKIEPPPVATTPPSK"
     gene            1328..>1772
                     /locus_tag="VF991_01530"
     CDS             1328..>1772
                     /locus_tag="VF991_01530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9555143.1"
                     /translation="MISAFFINRPVLANVLAIVIVLIGAVALATLPVAQYPNIVPPTV
                     QVTTTYPGASAKTVVDNVALPIELQVNGVEGMIYMQSTSTDAGTYALTVTFQIGTDLD
                     FAQVLVQNRVSAALASLPASVQAQGVVTQKKSTSILQIVSLTSPDG"
BASE COUNT          337 a          602 c          555 g          278 t
ORIGIN      
        1 gaagaccatg ccatatggga gctgatgtat ctcggcaagg cgcggtcgcc agcgccatga
       61 tcagagtaga ccgccgccgc ggtggcaatc ggcgatggga tgcggtaacg cttgagacag
      121 tttcgcggga gcgtcgctaa aaccatgttc aatcgcagcc tgatcctgct gcccttgctg
      181 gccgccgcat tggccggctg caagcccgag aacaagttcc agccgccgcc gccggcggag
      241 atcagcgtcg cggtgccgct gcagcagcag gtgcagccct acgaggtgct gaccggcaac
      301 accgcggcct tcaacaccgt cgacctggtg gcccgtgtcg aaggcttcct gagctcgatc
      361 aactacaccg atggcggctt cgtgaagaaa ggcgacctgc tcttcctgat cgagcagacg
      421 atgtacaagg ccaaggtcaa ggaggccgag gccagcctcg attcggccaa ggcccagctg
      481 ttgaacgccg aggccgagtt cacccgccag gagacgctgt tgcgccagaa cgtcacggcg
      541 cagaacacct acgaccaggc caaggccaag cgcgattcgg cgcgcgccaa tgtcgagagc
      601 caggaaggca acctgaccgt cgcccagacc aacctgggct acaccagcgt cacggcgccg
      661 ttcgacggca tcgtcaccag gcacctggtc tcggtcggcg aactggtcgg caacggggtc
      721 gcgaccaagc tcgcgaccat catccagctc gacccgatct acgtcacctt caacatgagc
      781 gagcaggatg tcttgcagat ccgcgagaac atggcccaac gccgcctgtc gctcgaagaa
      841 ctcgccaaga tcccgctcga tatcggcctg atggacgagg agggcttccc ccatcacggc
      901 tttctcaact acgtctcgcc cgagatcgat ccggcgaccg gcacgatcct ggtgcgcggc
      961 ctgttcaaga accccgaccg tgacctgctg ccgggcttct tcgcccgcat cagggtgccg
     1021 acggcgctgg gcagcaaggc cgccttgctg attcccaacc ggttggtcgc cgaggaccag
     1081 gccggcaaat acgtcctggt ggtcaacaag gacaatgtcg tcgagcagaa gcgcatcgtg
     1141 accgggcagc tcctggtcgg cggcctcagg gtgatcacct cgggcctcgc ggccgacgac
     1201 cgcgtcgtgc tgagcaccaa cggcaaggcg atcccgggca gcaaggtggt gcccaaggag
     1261 agcaagatcg agccgccgcc cgtcgccacg acgcccccgt cgaagtgacc ggcgcggagc
     1321 tgcctcgatg atttccgcgt ttttcatcaa tcggccggtg ctggccaatg tgctggccat
     1381 cgtcatcgtg ctgatcggcg ccgttgcgct ggcgaccctg ccggtggcgc agtaccccaa
     1441 catcgtgccg ccgaccgtgc aggtgacgac gacctatccc ggcgccagcg ccaagacggt
     1501 ggtcgacaac gtcgccctgc cgatcgaact gcaggtcaac ggcgtcgaag gcatgatcta
     1561 catgcagtcg accagcaccg acgccggcac ctacgcgctc acggtgacct tccagatcgg
     1621 caccgatctc gatttcgcgc aggtgctggt gcagaaccgc gtcagtgcgg cgctcgcctc
     1681 gctgccggcc tcggtgcagg cgcagggcgt cgtcacccag aagaagtcga cgtcgatcct
     1741 gcagatcgtg tcgctgacct cgccggacgg cc
//
LOCUS       DASWGA010000069         4519 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2284466, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000069 DASWGA010000000
VERSION     DASWGA010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4519
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2284466"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VF991_01535"
     CDS             <1..423
                     /locus_tag="VF991_01535"
                     /inference="COORDINATES: protein motif:HMM:NF024905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEX9555144.1"
                     /translation="TIAVVMSAPVVAAGGLDTRRAVAQRSVHRVTGCLLGGIVALACL
                     ALNVTSFLWWLAMIGAAVWVGMHVQVGKHGVGYVGTQAAFVFIVTLIQGSAPPDSIMP
                     GLDRFVGITGGLAILMIVSLLLWPTEAEFGEDKASAAD"
     gene            484..1389
                     /locus_tag="VF991_01540"
     CDS             484..1389
                     /locus_tag="VF991_01540"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9555145.1"
                     /translation="MNVKASPPARDHILRAILAIVFSVACFSVLNAISKTLMQHYPVV
                     QVIWARYVFAFAFMMALFLPRSGLALFRWHNVGSQVVRGLLLFFSSFLYFHGLVYLPL
                     ATAASISLTGPLIVTALSARFLGEPVGVRRWIAVCLGFAGALIVVRPGHAQFEWHSLL
                     IVASALCSAFYQLFSRRYGQTERPDASATMATIVGTVAAAPLLPFEWVTPSVGWDWVL
                     FVAIGVMAGVGHYFLTIAYSQAPAAVVAPFNYVQLIGAAVLGYLVFDTIPDLWTWVGA
                     AVIVCSGLYLGHAERLRYRRLANKI"
     gene            1687..2721
                     /locus_tag="VF991_01545"
     CDS             1687..2721
                     /locus_tag="VF991_01545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555146.1"
                     /translation="MDFSGAAVPSRRRFLKSAAAASTIAMAMGPGLFGGPAHAAGPVK
                     STHGSGFCNLNIFLAHSRQYAKGAGTELVFINTPTSAEMVTFLGMGQVDIGLMPYTSF
                     MALYDKGAPVKIVAGGGVEGCAIVARPGLDSPEKLKGKTLGTFQMDTLEVMPYDYLKK
                     HKISFKDIKVRYMGNTPEAVEAFKAGAIDWICTIEPYASALVADVKGAVMLTDGIDLY
                     GKGYTDCVLAARSSLMKDNPEGLKAIIKGMMQAQLDAETKTEEVLKELVGKYYKTSIE
                     NARIAQGKQPAVVDARSQTDFILQRTDSVVEMGYIKKKPGRDAIDWTLLEAVIKENPD
                     LYGKLKYKSA"
     gene            2723..3634
                     /locus_tag="VF991_01550"
     CDS             2723..3634
                     /locus_tag="VF991_01550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007558348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9555147.1"
                     /translation="MAVVERDASAGAAAGTSRPAAVTRMLATMGGLDWLTKVWWTCLS
                     VGLFAGIWELCWALGWADPQLLPPPHIFLSNFGEQGRFFNTATRWQVGNAMGEGPSAF
                     ESVMITVAATTMRVFVGLVLASVLAISIGVLIRYWHVFDKLVLPTVTLLSPVSPIAWL
                     PVAIFLFGIGNAPAIFMVVVALFFHMVLATIAQIDGVPPNLINVARTMGATKWQIYTR
                     VIVPAILPGMLQVLRMNLFGAWMVVLIAESTGVGYGMGQVIMLARNTFNPSLVFFTIA
                     VIGVLGFSFDWLLRLAQRRILYWLPDT"
     gene            3645..4475
                     /locus_tag="VF991_01555"
     CDS             3645..4475
                     /locus_tag="VF991_01555"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012322055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555148.1"
                     /translation="MASDTAPRFSSKDAVVCRGLGKTWAAGTKRAHEALRDVDIDIAP
                     GEFVVFLGPSGCGKSTLLYLIAGLEEATEGNIWSFSDKVETPSPERSLIFQETSLFPW
                     LTVWQNVSFGLAIRGASQAERRAVAAEALQRVGLSAAIDKRPDELSGGMRQRVAVARA
                     LAMRPKVLLMDEPFAALDVQTRARMQDFLLDVWRDSGASVLFVTHHIDEAVALADRVV
                     VFTSRPGRIKAIYPIDLPRPRNLFSREAEAMRIQLTELLRDEVDRAFAEQEAFAATAI
                     "
BASE COUNT          687 a         1525 c         1466 g          841 t
ORIGIN      
        1 acgatcgcgg tggtgatgtc ggccccggtc gtcgccgccg gcgggctgga cacgcgccgc
       61 gccgtcgccc aacgatccgt gcaccgtgtc acgggctgcc tgctgggcgg catcgttgcg
      121 ctggcctgcc tggcgttgaa cgtgacgtcg ttcctgtggt ggctcgccat gatcggcgcc
      181 gccgtatggg tgggcatgca cgtacaggtc ggcaagcacg gcgtcggcta tgtcgggacc
      241 caggcggcgt tcgtcttcat cgtcaccctg atccagggct ccgcgccgcc cgatagcatc
      301 atgccgggcc tcgaccgatt cgtgggcatc accggcgggt tggccatcct gatgatcgtg
      361 tcgctgctgt tgtggccgac cgaagcggag ttcggggaag acaaggcgtc ggcggccgac
      421 tgacgagagg ccgttacgaa aacgctgtca tgacagcgcc attgaaatcg cagtttccgc
      481 gccatgaacg tcaaagcctc gccgccggcg agagaccaca tcctgcgcgc catcctggcc
      541 atcgtcttct cggtcgcctg cttctccgtt ctcaacgcca tctccaagac gctgatgcag
      601 cactatcccg tcgtgcaggt gatctgggcg cgctacgtct tcgctttcgc cttcatgatg
      661 gcgctgtttc tgccgcgcag cggtctggcg ctgttccgtt ggcacaatgt cggcagccag
      721 gtggtgcgcg ggctgttgct gttcttctcg tcctttctct acttccatgg cctggtctac
      781 ctgcccttgg ccaccgcggc gtcgatctcg ctcaccggcc cgctgatcgt cacggcactg
      841 tcggcgcgct ttctcggcga gccggtcggg gtgcgtcgct ggatcgctgt ttgcctgggc
      901 ttcgccggcg cgctgatcgt ggtgcggccg ggccatgccc aattcgaatg gcattcgctg
      961 ctgatcgtcg ccagcgcgct gtgcagcgcc ttctaccagc tgttctcgcg gcgctacggc
     1021 cagaccgagc ggcccgacgc ctcggcgacc atggcgacca tcgtcggcac cgtcgccgcc
     1081 gcgccattgc tgccgttcga atgggtgaca ccctccgtcg gctgggactg ggttttgttc
     1141 gtcgccatcg gcgtcatggc gggcgtcggc cactatttcc tgaccatcgc ctacagccag
     1201 gcgccggccg ccgtcgtcgc gcccttcaat tacgtccagc tgatcggtgc cgcggtcctg
     1261 ggatatctgg tgttcgacac gatccccgac ttgtggacct gggtcggcgc ggcggtgatc
     1321 gtctgctccg gcctttatct cggccatgcc gagcggctgc gctatcgacg gctggcgaac
     1381 aagatttgat catctgacca agttttgggc gaccgcagtg cagcatggta gcacccgtcg
     1441 acccgtcgtc cgcgattgga gccggtggca cgggccttgc accttgccct ctagcgcagg
     1501 ctgcatcagc ggttctcttc ggttggcgtg ccgacaattt cgatgacggc tgccgttcgc
     1561 tgcggccggc gaggagtcgt cagggccagg ataccgacaa cgaattccca ctacccaccc
     1621 gctgatcgag gaggacacgt catgtgtgat cgcattggct gcatgcattt tcccaagctt
     1681 tccgagatgg atttttccgg cgccgccgtt ccctcgcgcc gccgcttcct gaagagcgcg
     1741 gcggcggcca gcaccatcgc catggcgatg gggccgggcc tgttcggcgg gccggcgcat
     1801 gccgcggggc cggtcaagtc gacgcacggc tcgggcttct gcaacctcaa catcttcctc
     1861 gcccattcgc ggcaatacgc caagggcgcc ggcaccgagc tggtgttcat caacacgccg
     1921 acctcggccg agatggtgac cttcctcggc atgggccagg tcgatatcgg cctgatgccc
     1981 tacacgagct tcatggcgct ctacgacaag ggcgcgccgg tcaagatcgt ggccggcggt
     2041 ggcgtcgagg gctgcgccat cgtggcccgc cccggactcg attcgccgga gaagctcaag
     2101 ggcaagacgc tcggcacctt ccagatggat acgctggagg tcatgccgta cgactacctg
     2161 aagaagcaca agatctcctt caaggacatc aaggtccgct acatgggcaa cacgcccgag
     2221 gccgtggagg ctttcaaggc gggcgccatc gactggatct gcaccatcga gccctacgcc
     2281 tcggctttgg tggctgacgt caagggtgcg gtcatgctga ccgacggcat cgatctctac
     2341 ggcaagggtt ataccgactg cgtgctggcc gcgcggtcga gcctgatgaa ggacaacccc
     2401 gaggggctga aggccatcat caagggcatg atgcaggccc agctcgacgc cgagaccaag
     2461 accgaggagg tgctgaagga gctggtcggc aagtactaca agacctcgat cgaaaacgcg
     2521 cgcatcgccc agggcaagca gcccgccgtc gtcgacgcgc gcagccagac cgacttcatc
     2581 ctgcagcgca ccgacagcgt cgtggagatg ggctacatca agaagaagcc cggccgcgac
     2641 gccatcgact ggacgctgct cgaggcggtg atcaaggaga accccgacct ctacggcaag
     2701 ctcaagtaca agtcggcctg agatggcggt cgtcgaacgc gacgccagcg cgggcgccgc
     2761 cgccgggaca tcccgcccgg cggcggtaac ccgcatgctt gcaaccatgg gcgggctgga
     2821 ctggctgacg aaggtctggt ggacctgcct gtcggtcggc ctgttcgcgg ggatctggga
     2881 actgtgctgg gcgctcggct gggccgaccc gcaactgctg ccgccgccgc acatcttcct
     2941 cagcaacttc ggcgagcagg gcaggttctt caataccgcg acgcgctggc aggtcggcaa
     3001 cgccatgggc gagggcccat cggccttcga atcggtgatg atcaccgtgg ctgccaccac
     3061 catgcgcgtg ttcgtcgggc tggtgctcgc ctcggtgctg gcgatcagca tcggcgtctt
     3121 gattcgctac tggcatgtct tcgacaagct ggtgctgccg accgtcacct tgctctcgcc
     3181 ggtgtcgccg atcgcctggt tgccggtggc gatcttcctg ttcggcatcg gcaacgcacc
     3241 ggccatcttc atggtggtgg tggcgctgtt cttccacatg gtgctggcga cgatcgccca
     3301 gatcgacggt gtgcccccca acctgatcaa cgtcgcgcgc accatgggcg cgaccaaatg
     3361 gcagatctat acgagggtca tcgtgccggc gatcctgccc ggcatgctgc aggtgctgcg
     3421 aatgaacctg ttcggcgcct ggatggtggt gctgatcgcc gagtcgacag gcgtcggcta
     3481 cggcatgggc caggtcatca tgctggcgcg caacaccttc aacccctcgc tggtgttctt
     3541 caccatcgcc gtgatcggcg tgctgggctt ctccttcgac tggctgctca ggctcgccca
     3601 gcgccgcatc ctctactggc tccccgacac ctaggagaag ctgcgtggcc tctgacaccg
     3661 ccccgcgttt ctcgtccaag gacgccgtgg tctgccgcgg cctcggcaag acctgggcgg
     3721 ctggcaccaa gcgcgcccac gaagccctgc gcgacgtcga catcgacatc gcgccgggcg
     3781 agttcgtggt cttcctcggt ccctcgggct gcggcaagag caccttgctc tacctcatcg
     3841 ccgggctgga ggaggccacc gaaggcaaca tctggtcgtt cagcgacaag gtcgagacac
     3901 catcgcccga gcgcagcctg atcttccagg aaacctcgct ctttccctgg ctgacggtgt
     3961 ggcagaacgt gagcttcggg ctcgccatcc gcggcgcctc gcaggcggag cgccgcgcgg
     4021 tcgccgccga ggcgctgcag cgggtcggcc tcagcgccgc catcgacaag cggccggacg
     4081 aactgtcggg cggcatgcgc cagagggtcg ccgtggcgcg ggcactcgcc atgcggccca
     4141 aggttctgct gatggacgag ccgttcgccg cgctggacgt gcagacgcgc gcgcgcatgc
     4201 aggacttcct gctcgatgtc tggcgcgatt ccggcgcgtc ggtgctgttc gtcacccacc
     4261 atatcgacga ggcggtggcg ctcgccgacc gggtcgtcgt gttcacttcc cgaccgggcc
     4321 gcatcaaggc catctatccc atcgacctgc cgcggccgcg caacctcttc tcgcgcgagg
     4381 ccgaggcgat gcgcatccag ctcaccgagc tgttgcgcga cgaggtcgac cgcgccttcg
     4441 ccgagcagga agcgttcgcc gcgaccgcca tctaacatcc tcccccgtca tacgggggag
     4501 gtggcccgaa gggccggag
//
LOCUS       DASWGA010000070         2450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1400905, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000070 DASWGA010000000
VERSION     DASWGA010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1400905"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VF991_01560"
     CDS             <1..666
                     /locus_tag="VF991_01560"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9555149.1"
                     /translation="YYRQNFHFQSGGWLTDHSAAIYDTQVEVLFTGAADVMRRRALRP
                     LAEWMKDRNQRDLKGLDVGCGTGRLLAFLHDAWPGLRLTGLDLSTPYLDEARRLIGHT
                     ARVKLIEGAAEKLPFDDASLDFVVSSFLMHELPDDIQSKVLSEMARVLKPGGLVVIVD
                     SIQRGDQPSWDGLLDLFPHYFHEPYYAAYANGNLAAWCSAAGLTSLASERAFLSKVAA
                     FTK"
     gene            complement(667..1059)
                     /locus_tag="VF991_01565"
     CDS             complement(667..1059)
                     /locus_tag="VF991_01565"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX9555150.1"
                     /translation="MRAVDTNVLVRLIVDDDPAQADAAQRAMVSEPVFVPKTVVLELE
                     WVLRSVYELSPTTIATAIEGLLSAADVSVEDATAVSRAVGGFKDGLDLADALHLASSS
                     HADAFVTFDAAMRRRAAAIGVRPPVVAP"
     gene            complement(1040..1303)
                     /locus_tag="VF991_01570"
     CDS             complement(1040..1303)
                     /locus_tag="VF991_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018899306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEX9555151.1"
                     /translation="MQTKVSTRGQVVLPKAIRDKRRWKAGTRLTVEDRPEGVLLKPVD
                     KKKKLTVDDLRGIVKYKGPPHTIEEMNAGIVAEVRRRFARGRY"
     gene            complement(1339..2424)
                     /gene="rlmN"
                     /locus_tag="VF991_01575"
     CDS             complement(1339..2424)
                     /gene="rlmN"
                     /locus_tag="VF991_01575"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019994833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEX9555152.1"
                     /translation="MVGLSRDALKTTLVEAGLEPFRARQVWQWIYWHGVSDFDRMTNI
                     AKQTRDRLAELFVVERPQIVTEQRSVDGTRKWLLRFGDGNEAETVNIPEEDRGSVCVS
                     SQVGCTLSCSFCHTGTQPLVRNLTPAEIVGQFMVARDSYGEWPTPTETTRMLSNIVMM
                     GMGEPLYNFDNVAAALKIAMDDQGIALSRRRITLSTSGVVPMIPRVGDVLDVNLAVSL
                     HAVSDAVRDTLVPINRKWPIAELLAVCTAYPGAKNSRRITFEYAMLKGINDSDADARE
                     LVRLLKPIHAKVNLIPFNPWPGAPYECSSNNRMHRFAEIVNAGGLSAPIRTPRGRDIF
                     AACGQLKSASARRKGERVRDIEAKAGV"
BASE COUNT          403 a          810 c          796 g          441 t
ORIGIN      
        1 tattatcgcc agaacttcca cttccagagc ggcggctggc tgaccgacca ttcggcggcg
       61 atctacgaca cccaggtcga ggtgctgttc accggcgccg ccgacgtcat gcgccgccgc
      121 gcgctgaggc ccctcgccga gtggatgaag gaccgcaacc agcgcgacct caagggcctc
      181 gacgtcggct gcggcaccgg ccggctgctg gccttcctgc acgatgcctg gcccggcctc
      241 aggctcaccg gcctcgacct cagcacgccc tatctcgacg aggcgcgacg tctgatcggc
      301 cacaccgcgc gggtgaagct gatcgaaggc gcggccgaga agctgccgtt cgacgatgcc
      361 agcctcgact tcgtcgtctc ctcgttcctg atgcacgagc tgccggacga catccagagc
      421 aaggtgctaa gcgagatggc gagggtcctc aagcccggcg gcctggtggt gatcgtcgat
      481 tcgatccaga gaggcgatca gccgtcgtgg gatggcctgc tcgatctctt cccgcactat
      541 ttccacgagc cctactacgc ggcgtacgcc aacggcaacc tcgcggcctg gtgcagtgcg
      601 gcgggattga cctcgctcgc cagcgagcgc gctttcctgt cgaaagtcgc ggccttcacc
      661 aaatagctac ggcgcgacga ccggcggcct gacaccgatc gcggcggccc ggcgacgcat
      721 ggccgcgtcg aacgtgacga aggcatcggc atgactgctc gaggcgagat gaagcgcgtc
      781 ggccaaatcc agaccgtcct tgaacccacc cacggcccgg ctgaccgctg tcgcgtcttc
      841 gaccgaaacg tctgccgccg agagcaagcc ttcgatggct gtggcaattg tggtcggcga
      901 cagttcgtac acgctgcgca agacccattc gagttcgagc acgaccgtct ttgggacaaa
      961 aacgggttca gataccatag cccgctgggc ggcatcggct tgcgccgggt cgtcgtccac
     1021 gatcaaccgg acaaggacgt tagtatcgac cgcgcgcaaa acgacgcctg acttccgcaa
     1081 cgattccggc gttcatctct tcgatcgtat ggggcgggcc tttgtacttc acgatgccgc
     1141 gaagatcgtc gacggtaagc ttctttttct tgtcgaccgg cttgagcagc acgccttccg
     1201 gccggtcttc cacggtcaag cgcgtgccgg ccttccagcg ccgcttgtcg cggatcgcct
     1261 tgggcaacac gacttgccct cgtgttgaaa ccttcgtctg catcacagct gcatcttacc
     1321 ggtaagatgg cacaagcgtc aaacgccggc cttggcctcg atgtcgcgca cccgctcgcc
     1381 tttccgacgc gcgctcgcgc tcttgagctg gccgcaggcg gcgaagatat cgcggccgcg
     1441 cggcgtgcgg atgggggcgc tcagcccgcc cgcgttcacg atctcggcga agcggtgcat
     1501 gcggttgttg gagctgcact cgtagggcgc gcccggccag ggattgaacg ggatcaggtt
     1561 caccttggcg tggatcggct tcaagaggcg caccagctcg cgggcgtcgg cgtcgctgtc
     1621 gttgatgccc ttcagcatgg cgtattcgaa ggtgatgcgc cggctgtttt tagcgccggg
     1681 ataggcggtg cagacggcca aaagctcggc gatcggccat ttgcggttga tcggcaccag
     1741 ggtgtcgcgc accgcgtcgc tcacggcgtg cagcgagacc gcgagattga cgtccagcac
     1801 gtcgccgacc ctcgggatca tcggcacgac acccgaggtc gagagcgtga tgcgccggcg
     1861 gctgagcgca atgccctggt cgtccatggc gatcttgagc gccgccgcca cgttgtcgaa
     1921 attatagagc ggctcgccca tgcccatcat gacgatgttg gaaagcatgc gcgtggtctc
     1981 ggtcggcgtc ggccattcgc cataactgtc gcgcgccacc atgaactggc cgacgatctc
     2041 ggccggggtg aggttgcgca ccaagggctg ggtgccggtg tggcagaagc tgcagctcag
     2101 cgtgcagccg acctggctcg acacgcagac cgagccgcgg tcctcctcgg ggatgttgac
     2161 ggtctcggct tcgttgccgt cgccaaagcg cagcagccat ttgcgcgtgc cgtcgaccga
     2221 gcgctgctcg gtgacgatct gcgggcgctc gaccacgaac agctcggcga gccggtcgcg
     2281 cgtctgcttg gcgatattgg tcatgcggtc gaaatcgctg acgccgtgcc agtagatcca
     2341 ttgccagact tggcgagcgc ggaacggctc cagccccgct tcgacgaggg tcgtcttcag
     2401 cgcgtcgcgc gatagcccga ccaggttgcg gcgccggtca ttgcggccgc
//
LOCUS       DASWGA010000071         6478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_515451, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000071 DASWGA010000000
VERSION     DASWGA010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6478
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515451"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VF991_01580"
     CDS             <1..356
                     /locus_tag="VF991_01580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555153.1"
                     /translation="VDTAAFELRRDEAVVAVQPQVFDLLVFLLENRHRVVTKGELLIG
                     SAPDERGEAKRSLLQALDVARKQGARALELRALTSLASHFPEWNRQLRTTRASFTEGG
                     DTVDIRLADEVLARA"
     gene            complement(527..784)
                     /locus_tag="VF991_01585"
     CDS             complement(527..784)
                     /locus_tag="VF991_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KTSC domain-containing protein"
                     /protein_id="HEX9555154.1"
                     /translation="MPSTVIRSYRYDPQRRELAIVFQTRCAYTYSEVPHETYAALKAA
                     FSKGEFFNRHIRGKFAFTRDEPDRPRRRHQSWASGRASSDQ"
     gene            complement(839..1039)
                     /locus_tag="VF991_01590"
     CDS             complement(839..1039)
                     /locus_tag="VF991_01590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555155.1"
                     /translation="MWFVFEAEYATENGRANWNKPIRETMAWHGPFETGAEADELVRA
                     RMWAKIDIYAHKARAVDLTVRD"
     gene            1460..1846
                     /locus_tag="VF991_01595"
     CDS             1460..1846
                     /locus_tag="VF991_01595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555156.1"
                     /translation="MLKTSTLVACVLALSGSAAMAQSWPSNWMPPGPNDAPGGANGPA
                     RTRDIGSPAANVNQTVGGQTTSTTILSQTNKQQSAAGASRSDYSSQAQLQYGGQARGN
                     VYMTDEYGFKYDSRGNRLDARGNPRR"
     gene            1987..4245
                     /locus_tag="VF991_01600"
     CDS             1987..4245
                     /locus_tag="VF991_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9555157.1"
                     /translation="MTGDSSNNKWIGKRTPRPDGADKVTGRAAYAADTNMPGMIWGKV
                     LRSPHPHARIKSIDTSKAEAMPGVMAVMTAKDIVDFPVAKGPVMLGIQDMRWMCRNVM
                     ARDKALFHGHPVAAVAATSQSIAAEALKLIKVDYEVLPWAIDVEAAIKPGAPILHDHI
                     KFQDKPSNIAGTLEHKKGDVEAGFKQADVIVERSFKTEAVHQGYIEPHACLVSVTDGK
                     ATIWSSSQGQFMVRAMSALLTGMTQSDIRAIPAEIGGGFGGKTIIYLEPLALILARKS
                     GKPVKMVMSREEVFRASGPTSGSISKVKIGAKKDGTIVAAQGTYYLQAGAFPGSPIRG
                     AAGCAFGPYDIENAHTVGYDVVSNRSKVAAYRAPGAPIGAYAVECVMDELAEKLGMDP
                     LELRMKNSAKQGTKAVHGPVYPVMGYQETLKQALAHPHYKAPLKPNQGRGVASGYWFN
                     AGGESSAQMSVNEDGTVVVMTGHPDIGGSRASTANIAAELLGIDHSKVQVLIGDTSSI
                     GFSNLTGGSRVTFASAMVVTQAAEKVITQLRQRAAKIWKIDPDAITWDNGEAKPAGDN
                     AGKFDPLSLAQLAARATETGGPIGAGASTNTAGAEGGFSTHICDVEVDRGTGRVWVTR
                     YTAFQDVGRAIHPDYVEGQMQGGVAQGIGWALSEEYIYDKNGKLDNAGFLDYRMPVTS
                     DLPMLDTVMIEIPNPKHPQGVRGVGEVPLVPVMAAVANAVHGALGLRLDSLPMSPPKV
                     LDALEPEAKAAD"
     gene            complement(4510..4800)
                     /locus_tag="VF991_01605"
     CDS             complement(4510..4800)
                     /locus_tag="VF991_01605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555158.1"
                     /translation="MANPPTSPAQFLSSLLTAVRELTGRRPPPTWTHVDKVQRKLGTD
                     NTDAVEAAIRLAVGRGWLRSDGDPPSSVTLTVAGVKLLEPGGAEGGAAGKPK"
     gene            4893..5162
                     /locus_tag="VF991_01610"
     CDS             4893..5162
                     /locus_tag="VF991_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX9555159.1"
                     /translation="MDMATESIVIILIVGIVAGWLAGKIVRGTGFGLIGDLLVGIAGA
                     FVAAWLFPRFGIHIGTGIVADIIYSALGAIILLLVVGLIRGLGRG"
     gene            5184..>6478
                     /locus_tag="VF991_01615"
     CDS             5184..>6478
                     /locus_tag="VF991_01615"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9555160.1"
                     /translation="MPNEASYDFIVTGAGSAGCAVAGRLSEDGRFRVLLLEAGPRDTY
                     PWIHIPLGYHKTFNNPRVNWMFDSEPEPELNGRVLYQPRGKVLGGTSSINGMVYMRGN
                     AADYDEWRQRGCDGWDYDSVLTYFKRAEDNARGTDAFHGTGGPLKVSDHRWQPTLAKA
                     MHDAAVQAGIPANPDFNGATQDGVGYYQSTINSARRWSSARAYLSGAKQLKNLTIATS
                     AHATRVLIENGRATGVEYRTPDGLTTARATREVIVSGGVYGSPQLLMLSGLGPAAHLK
                     QHGIAVIKDMPGVGSHLHDHFNTYVAYRCAQPVTMNDLVNSLPRRILAGAQYALGRTG
                     PLASMGLYVGALVRSDRRLERPDLQINMFAWAIKDRNRFGVVPQPFSAFGLSPVHLRP
                     DGRGTVRLKSADPLAAPEIRFNFLKSAYDYQAIIHGMKI"
BASE COUNT         1093 a         2217 c         2153 g         1015 t
ORIGIN      
        1 cggtcgacac cgctgccttc gaactgcggc gggacgaagc cgtcgttgct gtacaacccc
       61 aggttttcga cctgctggtg ttcctgctcg aaaaccggca ccgcgtcgtc accaagggcg
      121 agctgctgat cggcagcgca ccggacgagc gcggcgaagc caaacgcagc ctgttgcagg
      181 cgctcgacgt cgcccgcaag caaggcgcca gggcgcttga gctccgggca ctgacgagcc
      241 tcgcgtcgca tttcccggaa tggaacaggc aactgaggac gacgcgggca tctttcaccg
      301 aaggcggcga caccgtcgac atccgcctgg ccgacgaggt tctggcgaga gcctgacggg
      361 cctctgtcct tgcgacgccg tgcgtcgacg ccatcatctt ctatccgggg cagaccgcgg
      421 ccaacctgct ggcctgcgaa agcggctatt tccgcaccgc cgacgtgcgg cggctgggcc
      481 tcggcatgct ggtgctgacc atcgccgtcg ccctgctggt gctgccctac tggtcgctgc
      541 tcgccctgcc gctggcccag ctctgatgcc ggcggcgcgg ccggtcgggc tcgtcgcgcg
      601 tgaaagcgaa cttgccgcga atatggcgat tgaaaaactc gcccttcgag aaggcggcct
      661 tcagggccgc ataggtttcg tgcggcacct cgctataggt gtaggcgcac cgcgtctgga
      721 agacgatggc gagctcccgc cgttgcggat cgtatcggta ggagcggatg acggtcgacg
      781 gcatggccgg ataacgcccg ggacggcgct tggctgccag cttaagcgac gcgcccggtc
      841 agtcccgcac cgtcaggtcg accgcgcgcg ccttgtgggc gtagatgtcg attttcgccc
      901 acatgcgggc gcgcacgagc tcgtcagcct cggcgccggt ctcgaacggg ccgtgccagg
      961 ccatggtctc gcggatcggc ttgttccagt tggcccgccc gttctcggtc gcgtactcgg
     1021 cttcgaacac aaaccacatc gttcgctcca gacgaaaatc aattgagccg cgcgactatg
     1081 tagggcgtga tgcctgtgtc gagcaggacc ttcatttctt tctcgtcggc cgtttgcggt
     1141 gcggtggaca caactcctcc agggacttgc ggacctgctg ctccggctga tggcgctcga
     1201 tcgggaatgc gggatcgtac atgccgagga gcggcgaaga agtccttcca cgggtctccc
     1261 ttcggtttct ccgtcagcaa cggcctcgcc gcttcgtccg cgtgaccatg tccaaaagtc
     1321 ctttcccggg catcgtgccg ataccggggc aattgaggca gcaccggggc ggggccggca
     1381 agtgcgcgat ggcggcggcg caacgccgcc atcggccggg gcgttttgtt tatagcctta
     1441 accagcaagg agaaacgcca tgctgaagac atcgaccctc gtcgcctgcg tgctggccct
     1501 ctcgggctcc gcggcgatgg cccagagctg gccgtccaac tggatgccgc cgggtcccaa
     1561 cgatgcgccg ggcggcgcca acggtccggc gcgcacgcgc gacatcggca gcccggccgc
     1621 gaacgtcaac cagacggttg gcgggcagac gacctccacc accatcctgt cgcagaccaa
     1681 caagcagcag agcgcggccg gcgcgtcgcg cagcgactac agctcgcagg cccagctgca
     1741 atacggcggc caggcgcgtg gtaacgtcta catgaccgac gaatacggct tcaagtacga
     1801 cagccgcggc aaccgtctcg acgcccgcgg caacccgagg cgctagcgtc gggtcctctc
     1861 cgagcccggc cgggcgcccc ccggccgggc ttttgctggg cgcatcctca gcccgtcggg
     1921 gccattgatc ttggcggcgt gaaccgcttt gattgaggct caccgaacgg gacaggatca
     1981 acagccatga ccggcgacag ctcgaacaac aagtggatcg gcaagcgcac cccccggccc
     2041 gacggcgcgg acaaggtcac ggggcgggcg gcctacgccg ccgacaccaa catgcccggc
     2101 atgatctggg gcaaggtcct gcgcagcccc catccccatg cccgcatcaa gtcgatcgac
     2161 acctcgaagg ccgaggcgat gccgggcgtc atggctgtga tgacggccaa ggacatcgtc
     2221 gattttcccg tcgccaaggg gccggtgatg ctgggcatcc aggacatgcg ttggatgtgc
     2281 cgcaacgtca tggcgcgcga caaggcgctg ttccacggcc atccggtggc cgctgtcgcc
     2341 gccacctcgc aatcgatcgc ggcggaagcg ctgaagctga tcaaggtcga ctacgaggtg
     2401 ctgccctggg cgatcgacgt cgaggcggcg atcaagcccg gcgcgcccat cctgcacgac
     2461 catatcaagt tccaggacaa gccctccaac atcgccggca cgctggagca caagaagggc
     2521 gacgtcgagg ccggcttcaa gcaggccgac gtgatcgtcg agcgcagctt caagaccgag
     2581 gccgtgcacc agggctatat cgagccgcat gcctgcctgg tcagcgtcac cgacggcaag
     2641 gccacgatct ggagttcgag ccagggccag ttcatggtcc gcgccatgtc ggcgctgctg
     2701 acgggcatga cgcagagcga catccgcgcc attccggccg agatcggcgg cggcttcggc
     2761 ggcaagacca tcatctacct cgagccgctg gcgctgatcc tggcgcgcaa gtcgggcaag
     2821 cccgtcaaga tggtgatgtc gcgcgaagaa gtgttccgtg cctccggacc gacctcgggc
     2881 tcgataagca aggtcaagat cggcgccaag aaggacggca cgatcgtcgc cgcccagggc
     2941 acctactacc tgcaggccgg cgcctttccc ggctcgccga tccgcggcgc cgccggctgc
     3001 gccttcgggc cctacgacat cgagaatgcc cacacggtgg gctacgacgt ggtttccaat
     3061 cgctcgaagg tcgcggccta ccgcgcgccc ggcgcgccga tcggcgccta tgccgtcgaa
     3121 tgcgtgatgg atgagctggc cgagaagctc gggatggatc cgctcgagct ccgtatgaag
     3181 aactccgcca agcagggcac caaggcagtg cacggtccgg tctatccagt catgggctac
     3241 caggagacgc tgaagcaggc gcttgcccat ccgcactaca aggcgccgct caagcccaac
     3301 cagggccgcg gcgtggcgag cggctactgg ttcaacgccg gcggcgaatc gagcgcgcaa
     3361 atgagcgtca acgaggacgg cacggtcgtg gtgatgaccg gccatcccga catcggcggc
     3421 tcgcgcgcct cgaccgccaa catcgcggct gagcttttgg gcatcgacca cagcaaggtg
     3481 caggtgctga tcggcgacac cagcagcatc ggcttctcga acctgaccgg cggcagccgc
     3541 gtcaccttcg cgtcggccat ggtggtcacg caggcggcgg agaaggtcat cacccagctg
     3601 cgccagcgcg cggccaagat ctggaagatc gatcccgacg ccatcacctg ggacaacggc
     3661 gaggccaagc cggccggcga caatgccggc aagttcgatc cgctgtcgct ggcccagctc
     3721 gccgcccggg cgaccgagac cggcgggccg atcggggctg gtgcgtcgac caacaccgcc
     3781 ggcgccgagg gcggcttcag cacgcatatc tgtgacgtcg aggtcgaccg cggcaccggc
     3841 cgcgtctggg tcacgcgcta caccgccttc caggatgtcg gccgggcgat ccatcccgat
     3901 tacgtcgagg gccagatgca gggcggcgtc gcccaaggca tcggctgggc gctcagcgaa
     3961 gagtacatct acgacaagaa cggcaagctc gataacgcgg gcttcctcga ctatcgcatg
     4021 cccgtcacct ccgacctgcc gatgctcgac accgtcatga tcgagatccc caacccgaag
     4081 catccgcagg gcgttcgcgg cgtcggcgag gtgccgctgg tgccggtgat ggcggcggta
     4141 gccaatgccg tccacggcgc cctgggtctt cggctcgaca gcctgcccat gtcgccaccg
     4201 aaggtgctgg acgcgctgga gcccgaggcg aaagcggccg actaggccgc ttccttgccg
     4261 tagagcgcct gagtggccat gcgcttcaag tggttgaatg aacttcgaca ctggtttgca
     4321 gccccgccgg ggccgacgga ccgcgcgctg cgggacatct cgaaattcgg aatcggagtc
     4381 tgcccaggct gcaggggatt gcgcggaacg gccagcttgc gctgcggcca ttgcggcagc
     4441 gccgcgcctg tcacagacga cgcctgactg cgcttcaggt ccgccgcgtg gcggcggccg
     4501 tcgctctagc tacttcggct tgcccgctgc cccgccctct gcgccaccgg gctccagcag
     4561 cttgacccct gcgacggtca gcgtgaccga cgagggcgga tcgccatcgg agcgcagcca
     4621 gccccggccg accgcgagtc ggatcgcggc ctcgacggcg tcggtattgt cggtcccgag
     4681 cttgcgttgg accttgtcga cgtgcgtcca ggtgggcggc ggccgccgcc cggtgagttc
     4741 gcgcacggcc gtcaagaggg aagacaggaa ctgcgcgggg ctggttggcg ggttggccat
     4801 cgtcccgact ataggttgac gcgcgttctt ggggtagaga ggtctacggc aaggcgtttg
     4861 cctgaaccaa cgccgccgcg gaggacgaag tcatggacat ggcgaccgaa agcatcgtga
     4921 tcattctcat cgtcggcatc gtcgccggct ggctggccgg caagatcgtt cgcggcaccg
     4981 ggttcggcct gatcggcgat cttctggtcg gcattgccgg tgcgttcgtg gcagcctggc
     5041 tgttcccgcg gttcggcatt cacatcggga ccggcatcgt cgcggatatc atctattcgg
     5101 cgctgggcgc gatcatcctg ctgctggtcg ttggcctgat ccgcggactc ggcaggggtt
     5161 agccctctgc cggaagcggc gacgtgccga acgaggcgtc ctacgatttc atcgtcaccg
     5221 gggccggctc ggccggctgc gccgtcgccg ggcggctgag cgaggacggc cgctttcgcg
     5281 tgctgctcct cgaagccggc ccgcgcgaca cctatccgtg gatccacatc ccgctcggct
     5341 accacaagac gttcaacaac ccgcgcgtca actggatgtt cgattcggag cccgagcccg
     5401 agctcaacgg ccgcgtgctg taccagccgc gcggcaaggt gttgggcggc accagctcga
     5461 tcaacggcat ggtctatatg cgcggcaatg ccgccgacta cgacgaatgg cgccagcgcg
     5521 gctgcgacgg ctgggactac gattcggtgc tgacctactt caagcgggcc gaggacaacg
     5581 cgcgcggcac cgacgccttc cacggcaccg gcggtccgct gaaggtgagc gaccatcgct
     5641 ggcagccgac gctggccaag gcgatgcacg acgccgcggt gcaggccggc atccccgcca
     5701 atcccgactt caacggcgcc acccaggacg gcgtcggcta ctaccagagc accatcaaca
     5761 gcgcgcgacg ctggtcctcc gcccgggcct atctgagcgg cgccaagcag ctcaagaacc
     5821 tgaccatcgc cacgtcagcg catgcgacgc gcgtgctgat cgagaacggc cgcgccacgg
     5881 gcgtcgaata ccgcacgcca gacggcctca cgacggcgcg ggcgacgcgc gaggtgatcg
     5941 tctcgggcgg cgtctacggc tcgccgcagc tcctgatgct gtccggcctc ggcccggcgg
     6001 cgcatctgaa acagcacggc atcgcggtga tcaaggacat gccgggcgtc ggcagccacc
     6061 tgcacgacca cttcaacacc tatgtcgcct atcgttgcgc ccagcccgtg acgatgaacg
     6121 acctcgtcaa cagcctgccg cgccggatac tggcgggcgc gcagtacgcg ctcggccgca
     6181 ccgggccgct ggccagcatg ggcctgtatg tcggcgcgtt ggtccgcagc gaccggcggc
     6241 tggagcgccc ggacctgcag atcaacatgt tcgcctgggc gatcaaggac cggaatcggt
     6301 tcggcgtcgt gccgcagccc ttctcggcgt ttggcctgag cccggtgcat ctcaggcccg
     6361 atggccgcgg cacggtgcgg ctgaaatccg ccgacccgct ggccgcgccg gagatccgct
     6421 tcaacttcct gaaaagcgcc tatgactacc aggcgatcat ccacggcatg aagatctg
//
LOCUS       DASWGA010000072         2368 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2034126, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000072 DASWGA010000000
VERSION     DASWGA010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2368
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2034126"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..782
                     /locus_tag="VF991_01620"
     CDS             <1..782
                     /locus_tag="VF991_01620"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9555161.1"
                     /translation="MWHHRELIQAILRRELRARFQGSAGGWFWAVVAPLVAIAVYTFA
                     FTTNLQLPLADTFGNHRIAYALFIFSGIVVFNFFSEMAYRSPMLLHEYAHYIKQTIFP
                     SDMLAVISMLRATAYTVISVVVMLIFQLSVTGSLPWTVLLIPLIFPPLMVFLVGLSWF
                     LCAVGAFTRDAGYLMINIVPLFMFATPVFYPHNSLAPPFNILVYGNALTGYIEVMRDI
                     VLLGHLPNPLVYGWILFTAVTTFYFGYWFFDRYRNVIVDVI"
     gene            760..1542
                     /locus_tag="VF991_01625"
     CDS             760..1542
                     /locus_tag="VF991_01625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016917960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555162.1"
                     /translation="MSSSTSSEVVVRARHLGKAYQLYARRGDWLKQVMLGWWKTYYKP
                     FWVLRDVDLDVHRGESIGILGRNGCGKSTLLQVICGMTLPSNGELRVTGRIAPVLALG
                     ATFDAELSGRENIMIGGAVFGLKRAELLRKFDSIAEFAGIGDYMEQPVKHYSMGMRTR
                     LAFAICAHVDAEILVVDEALAVGDAAFQRKCMDWIDSFRQNGTLLFVSHSTAEVRRLC
                     TRAIWIEDGRIRAQGEASVVIRAYHRALAMEKDDVHRFSAGA"
     gene            1549..>2368
                     /locus_tag="VF991_01630"
     CDS             1549..>2368
                     /locus_tag="VF991_01630"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9555163.1"
                     /translation="MAACLLFWIGLGWWAGATLVQWASAALALRRRPSPPPRHGAADF
                     SVVAPLAGAHDASELYIGRLAELSRAGAEVLICVASELDEAAAQTRAHWPDAPILVGS
                     DDTFNPKLNNVRKGLEAASRPVVALCDAGIALNASELGAAAAQLSDEVGLVLALKAGE
                     RPRGFAAEMECAYINGHQARFLLAADRLGMPVASGGVTILSRDVLQRIGGHQGFLNYI
                     ADDYSVVRAVRERVGRTTWLANFMPRMPVGGRRWPEVWRRQVRWGSTRLNLPTEV"
BASE COUNT          346 a          777 c          778 g          467 t
ORIGIN      
        1 agatgtggca tcatcgcgag ttgatccagg cgatcctgcg tcgcgagctg cgcgcgcgct
       61 tccaggggtc ggccggcggc tggttttggg cggtcgtcgc gcccctggtg gcgattgccg
      121 tctatacttt tgccttcacc accaatttgc agctgccgct cgccgacacg ttcggcaatc
      181 accgcatcgc ctatgccctg ttcattttca gcggcatcgt cgtcttcaat ttcttttcgg
      241 agatggcgta tcgctcgccg atgctgctgc acgagtacgc gcactacatc aagcagacga
      301 tctttcccag cgacatgctg gcggtgatct cgatgctcag ggcgacggcc tacacggtca
      361 tttctgtcgt cgtcatgctg atcttccagc tttcggtaac tggtagcctg ccgtggacgg
      421 tgctgctgat cccgctgatc ttcccgccgc tcatggtgtt cttggtcggc ctatcgtggt
      481 tcctgtgcgc ggtcggcgcc ttcacgcgcg acgctggcta cctgatgatc aacatcgtgc
      541 cgctgttcat gttcgccacg ccggtcttct atccgcacaa ttcgctggcg ccgccgttca
      601 acattctggt ctatggcaat gcgctgaccg gctacatcga ggtcatgcgc gacatcgtgc
      661 tgctgggcca cctgcccaac cccctggtct acggctggat actgttcacc gccgtgacga
      721 ccttctactt cggctattgg ttcttcgaca ggtaccggaa tgtcatcgtc gacgtcatct
      781 gaagtcgtcg tccgcgcccg gcacctcggc aaggcctacc aactctatgc gcgacggggc
      841 gactggctga agcaggtgat gctcggctgg tggaagacgt actacaagcc gttctgggtc
      901 ctgcgcgacg tcgatctcga tgtccatcgc ggcgaaagca tcggcatcct gggccgcaac
      961 ggctgcggca agtcgaccct tctgcaggtg atctgcggca tgaccctgcc cagcaacggc
     1021 gagctccggg tcaccggccg catcgccccc gtgctggcgc tcggcgccac cttcgacgcc
     1081 gagctgtcgg gccgcgagaa catcatgatc ggcggcgcgg tgttcggctt gaagcgcgct
     1141 gagttgctgc gcaagttcga ttcgatcgcg gaattcgccg gcatcggcga ctacatggaa
     1201 cagccggtga agcattattc gatgggcatg cggacacggc tggccttcgc catctgcgcc
     1261 catgtcgacg ccgaaatcct ggtggtcgat gaagcgctgg cggtcggcga cgccgccttc
     1321 cagcgcaagt gcatggactg gatcgacagc ttccgccaga acggcacgct cctgttcgtg
     1381 tcgcactcga cggccgaagt gcggcggctg tgtacgcgcg ccatctggat cgaggacggc
     1441 cgaatccgcg cgcaaggcga ggccagcgtg gtcatccgcg cctatcatcg cgcgctggcg
     1501 atggaaaagg acgatgtcca ccgcttctcg gctggcgcgt gatggccgat ggcggcttgt
     1561 ctcctgttct ggatcggtct cggctggtgg gccggcgcca cgctcgtgca gtgggcgagc
     1621 gcggcgctcg cactgcggcg caggccgtcc ccgccgccgc ggcacggggc ggccgatttc
     1681 agcgtcgtgg cgccactggc cggcgcccat gacgcgtccg agctctatat cgggaggctg
     1741 gcggagctgt cgcgcgccgg tgccgaagtc ctgatctgcg tggccagcga gctcgacgag
     1801 gcggctgcgc aaacgcgcgc gcactggccc gacgcgccga tcctggtcgg cagcgacgac
     1861 accttcaatc ccaagctgaa caacgtgcgc aagggcctcg aggcggcgag ccggccggtc
     1921 gtggcgctgt gcgatgccgg catcgcgctc aacgccagcg agctcggcgc ggccgcggcg
     1981 caattgtcgg acgaggtcgg gctcgtgctg gcgctcaagg ccggcgagcg gccgcgaggc
     2041 ttcgccgccg agatggagtg cgcctacatc aacggccatc aggcgcgctt tctgctggcc
     2101 gccgaccggc tgggcatgcc cgtcgcctcg ggcggcgtga cgatcctcag ccgggacgtc
     2161 ctgcagcgaa tcggcggcca ccagggtttt ctcaactata tcgccgacga ttattcggtg
     2221 gtgcgtgccg tgcgcgagcg tgtcggccgc acgacatggc tcgccaattt catgccgcgc
     2281 atgccggtgg gcggccgacg ctggccggag gtatggcgcc gtcaggttcg ctggggttcg
     2341 acgcgtctca atcttcccac cgaggtga
//
LOCUS       DASWGA010000073        13283 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_262308, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000073 DASWGA010000000
VERSION     DASWGA010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 13283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13283
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262308"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..957)
                     /locus_tag="VF991_01635"
     CDS             complement(<1..957)
                     /locus_tag="VF991_01635"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEX9555164.1"
                     /translation="MTLSTSKRFLISAGGLVGLLIVALLVVPLLVDIDSYKPEIVAQV
                     KRATGRDVVIDGPIRLSLLPVPSVRVDGVKFFNMPGSKNPNMVEVKSVTVRPSLLALL
                     IGNVEIGEVTLVEPKIVLEINAQGKPNWEFTPSLAEAKPAAAKPSSPKPLSLGRLTID
                     NGTLIFSDSKAGLSVAAEKANFSASVGSMDGPYSLAGSATINGSPLKVDLSVSAKGPT
                     GHNAEVALEAGGGRLSYKGTLSELGPDARLAGMVSASADNLVAFAEALIQIAGQPLPP
                     LPPLLAGKFKFDGPIEFSQTAFAAKDFKLALGEDSGSGSLALV"
     gene            complement(954..1271)
                     /locus_tag="VF991_01640"
     CDS             complement(954..1271)
                     /locus_tag="VF991_01640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555165.1"
                     /translation="MSGNRWRGGYQARHKNEAQPAPAGQPPAKRSHHLQRSPAPRLFD
                     FTSLTDGLSHGNQSVAFSTGKSLLTTSKFGTSIFGMIVAENLVPPSDDALVLERQAPG
                     GVS"
     gene            1275..2882
                     /locus_tag="VF991_01645"
     CDS             1275..2882
                     /locus_tag="VF991_01645"
                     /inference="COORDINATES: protein motif:HMM:NF015803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEX9555166.1"
                     /translation="MDQAVIAGAREIIADQNAIIRQYSPPLRRPPSIGLRVTAPVAGI
                     APERLAETRFRLTAVDIVGMTSLDPATFAFLWQGLIGREISLLDVKALLERIESTARQ
                     RDYLVVALAPTQDFSTGRLRIVVSEGYIRDLVVKGDIARFGGRLEPFLARVAAIRPLR
                     VSQVYRQLLIMEDLAGVSVDAHMSRIEDEPGAARLELTISFKPGELNIKLNNYGAEGI
                     GPLQGGVVADINDMFGLFESTEFLAVTNPAAPQRLTFVRLSQSVPLGPTGFSFSYGIG
                     QSWSNPETPEARALRLHAEVRTANVALNYALLRADERNVIVSAAVNGNNTSLDIAGQP
                     VLRERTRWVSFGAKYNDQIGGVHFILNPVLMQGVDALDANVTHSQFSAAAISGRITAS
                     LTESLEATLLFNAQYAFNTLPAAMLVNYGGDTFGRGFEPGAIHGNSAVLGSLELAQKI
                     DTRLSWLPGFSLCTFVDYGAVWNPPELSVYEYASLSSIGFGIRTGVGQHLVASGFVVQ
                     PLGYNVQLAALGLDQSLKLRFTLGLRF"
     gene            complement(2910..4382)
                     /locus_tag="VF991_01650"
     CDS             complement(2910..4382)
                     /locus_tag="VF991_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX9555167.1"
                     /translation="MAGNVNVLIAGAGPVGLTLANELTRYGVSVRIVDKAAERTDKSK
                     ALVLWSRSLELFDHAGYVDEFLAAGMPAHGAQISNGKEVIARISLDDIDCIYPYALMI
                     PQSETERVLEERLEKQGVKVERNVALESFVDQGDKVQAVMRKTSGESETLMADWLVGC
                     DGAHSAVRHGLGFTFDGTTQPSDWYLADGHISGLDGQDRLHIYWHKDGILAFFPITQG
                     RWRVVADLGPAQTEGHHADPTLEEIQSLLTRRGSDALVIKDAYWLASFRINERKVSKY
                     GRGRAFLAGDAAHIHSPAGGQGMNTGMQDAFNLAWKLSLVSGGVCKPSLLDSYSVERS
                     AVGDMVLRNAGRMTDAAVMRNPIAQGLRNAVVKFAFGFPQLGHRAANTLAELDIGYPE
                     SPLTVNGAHRPNGTKAGARWRDRLPADAGKARFTAIGPADVVAELAAKFPRLVQAPPA
                     AIRADAKDLSLVRPDGYVGFAGAVSDRVGAEAYLLGLTAR"
     gene            complement(4508..4972)
                     /gene="bcp"
                     /locus_tag="VF991_01655"
     CDS             complement(4508..4972)
                     /gene="bcp"
                     /locus_tag="VF991_01655"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007563263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HEX9555168.1"
                     /translation="MSVEEGKKAPDFSATTDGGNKLKLSDLRGKPVVLYFYPKDDTSG
                     CTAEACGFRDSLPNFSKVKAQVIGVSKDGVDRHDKFKKKYGLNFPLVSDEDGKICEKY
                     GTWVEKSLYGRKYMGIERATFLIDKTGTVAKIWHKVKVPGHVNEVLQAVKAL"
     gene            complement(4969..7926)
                     /locus_tag="VF991_01660"
     CDS             complement(4969..7926)
                     /locus_tag="VF991_01660"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: protein motif:HMM:NF010706.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamine synthetase]
                     adenylyltransferase/[glutamine
                     synthetase]-adenylyl-L-tyrosine phosphorylase"
                     /protein_id="HEX9555169.1"
                     /translation="MSWLSTARLPRPHDLERRDVAWTRWSEKAARPDDPADVALLDAL
                     FGNSPYLTETAIQNPTFMTDLWRRGPDAVRLDLAAELDVVRADARAGALPALVATKLR
                     QLKRRLALTVAVADIAGTWPLDKVTGELSAFAAGCLGALTDSILLQLERDGQLSLGGE
                     PDAAALTVLGMGKLGAGELNYSSDIDLILLYDRDAPALGGNDQLSRHFVRGARLLVQL
                     MSETSADGYIFRTDLRLRPDPGSTPLAMSVQAAELYYESVGQNWERAAMIKAHPVAGT
                     LAVGHAFLAELTPYIWRKHLDFAAIHDIHSIKRQIDAHRGGSAVKVLGHNVKLGRGGI
                     REIEFFAQTQQLIFGGRNPALRLRGTCETLRALAAAGHVTAADADELVEAYGFLRTVE
                     HRLQMVDDRQTHTLPADEAGVAAIATFLGYPDSTSFQSELLERLHCVESHYGRLFEEA
                     PSLAGPGGNLVFTGSDDDPGTLQTLRTLGFRDVSAAAGIVRRWHHGRFRATATARARE
                     LLTELMPGLLKALGSTAAPDQALLNFDLFLGNLPAGIQLFSLFKANPALLDLVATIMG
                     SAPGLAAHLARRTLLLDSVLSPDFYRPLPSAIEMTVDLAAQLAKVDHEQDILDLARRW
                     ANDRRFQVGVQQLKAIVRPAQAGLAYSDVAAATISALCDRVERRFAEAHGGFRGQRLA
                     VLGMGKLGSREMSATSDLDLIFVYDIPPGLEASDGPQPLAPIQYYTRLSAKIVTALTA
                     HTNEGTLYEVDMRLRPSGRAGPLANSLEGFESYHAQSAWTWEHMALSRARVIHGPPAL
                     VTRLVDIVKSTLCRPRDRETLVRDVADMRDRIARHAPPRSPWDFKHLPGGLFDIDFVA
                     QYLALRHANQRPDLLDPHPAEMLRRAAAAGFIDRADAERLRATRILLSDVQSLLRLTL
                     DGDESAFDESKAPEGQQRLIAATEGAADLAELRARIAAETAAARAIYRRIVEEPARAA
                     GWQPRREDKGGDG"
     gene            8056..11148
                     /locus_tag="VF991_01665"
     CDS             8056..11148
                     /locus_tag="VF991_01665"
                     /inference="COORDINATES: protein motif:HMM:NF024516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3971 domain-containing protein"
                     /protein_id="HEX9555170.1"
                     /translation="MGVVLVLATLVVVAVLRLMAGPVDLDFLKARIVQAADVPGNDMR
                     PDVDRISLEWGGISQPMRLVFTGLRFLSGQNQVIATAPTVALTFDPRSVFQGMLLPTS
                     ITIEKPTIEAEIDREGGMLRRIFSDPSAQSQGEAVSILVEQLLAEPNYNSLIGQLDTI
                     KIEQAKLTLRDTKTGLTWVAPAARAELKRDAGGVIIAADARFSGGDPFEVSLTGVYAR
                     DRSRISVEAKVDGLKPAMFADLSPDAVLLRGVDIALSGRLRIEADGTGDIRHVTIDVT
                     GGNGRVTLPGILPAAHPVKSVTARATVDAASHTAKIERIAFDFGAAKVSVVGTGMRTP
                     EGQRFAGRAEMVRIPVDRLGDYWPLEFAPGGRAWALANLSNGEIDSVAEFALSAPGND
                     MAELKIDRMVGLIDYRGMTVRYMPRMPELQGVSGKARYEGGTLHFDVASGSAVGLRTA
                     GATIDLTGLDGPAPQYAAIRMPIAGSAQDVIRFLARPKLGLPREMLYDYRRLGGDVTI
                     DVSLGFPLLDALTVAELDIKAEASVAHFSLKDVVGEVGLTDATARVKYANSELNVAGT
                     GKLDGNLVEIGWRELFGAKAPFRRRYDLKGTLPAALIGKAGFPSPEPYVTGPLATTLH
                     YQVATNGTGEVVGRFELKGATVAARPLAWNKEPGTDGQLLLAVKLLAGGKLSTIDFEG
                     RANGLLGKGQVRFAGDNALQQIALQQLKIGRTDVAVDWKRTPNGVELALRGPSLELPR
                     VRHAMKVRDEFAAKNPAGPAGAAQSSTKMTLQLQQVLTERGTLGYANGRLELAGERIA
                     LADLTIGAGTGSTFRVTPAGTGRTLFLYVADFGAMLHDAGWLDGLAKGNLHIEGRYDD
                     SVAGSPLAGTLKMGPYRLEKVTQRPGVGTLNSAIDGLSRAGNALQQFDNLEANIAKKG
                     DRIQIRKGRTSGQSIGLTAQGFVDLGKDTARLSGVVVPGFALNNLLSNVPLLGPLLTG
                     GKDGGVFAISYQLHGPLDDLKTDINMMSAVTPGALRELFNGPADGYQPPASQEMQRAP
                     "
     gene            complement(11145..12398)
                     /gene="tyrS"
                     /locus_tag="VF991_01670"
     CDS             complement(11145..12398)
                     /gene="tyrS"
                     /locus_tag="VF991_01670"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEX9555171.1"
                     /translation="MAGFKSDFMRIVHERGMVHQCSDAARLDELLSTGTRTAYIGFDC
                     TADSLHIGHLLQVMLLRWWQKTGHKPIALMGGGTTKVGDPSGRDETRQLLTPQQIDAN
                     MASIKRSFANYLAFGDGPTDAVMANNADWLDTLLYIPLLRDVGRHFSVNRMLSMDSVK
                     LRLERDQPLSFLEFNYMILQSYDFVELHKRHHCILQMGGSDQWGNIVMGADLGRRMQG
                     AELFALTSPLLAASSGAKMGKTAAGAVWLNPGRLRPYDFWQYWRNAEDEDVGRFLRLF
                     TELPLDEIAKLEALKGQEINEAKKILATAVTTLAHGKPAAEQAAETARRTFEEGGKAD
                     TLPTVDVPRTRLAAGIAAFELLHEAGLAESRTEARKLIKGGGARLNDQPIAADTARIG
                     ESDLDSSGTLKLSAGRKRHVLVRAA"
     gene            12555..>13283
                     /locus_tag="VF991_01675"
     CDS             12555..>13283
                     /locus_tag="VF991_01675"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEX9555172.1"
                     /translation="MMRALGLMSGTSVDGVDVALIETDGERVEAFGATLTVSYPDDVR
                     RTIRAAFGAEQASETTRAAERAITDAHIDAVRRWSVEHGTPLASLDIVGFHGQTITHR
                     PEKHFTWQIGDGAALARALGVRVVDDLRGADVLAGGQGAPLVPIYHAALVRDLPRPLA
                     VMNIGGVANVTWIGADDALLAFDTGPGNGPIDDWCARRAGRRFDEDGALAASGKVDRP
                     RLERFSEHRYFARKPPKSLDRGDFN"
BASE COUNT         2204 a         4383 c         4464 g         2232 t
ORIGIN      
        1 aacaagcgcc agcgagcccg agccactgtc ctcccccaag gccagtttga agtcctttgc
       61 ggcaaaggcg gtctgcgaga actcgatcgg gccgtcgaac ttgaatttgc cggccagcaa
      121 cggcggcaag ggaggcagag gctgaccggc gatctggatc agagcctcgg cgaaggcgac
      181 gaggttgtcc gccgaagccg acaccatgcc ggcgaggcgc gcgtcgggcc cgagctcgct
      241 caaggtcccc ttgtaggaca gcctgccgcc gcctgcctcc agcgccacct ccgcattgtg
      301 accggttggt cccttggcgc tgacggacag gtcgaccttc aacggcgagc cgttgatggt
      361 ggcgctgccc gcgagtgaat agggcccgtc catcgagccg accgaagcgc tgaaatttgc
      421 cttttccgcc gcgaccgaaa ggccggcctt ggaatcgctg aagatcagcg tgccgttgtc
      481 gatggtgagc cgccccagcg acagcggctt gggcgagctg ggcttggccg ccgcgggctt
      541 ggcttcggcc agcgagggcg tgaactccca gttcggtttg ccctgggcgt tgatctccag
      601 gacgatcttg ggctcgacca gggtcacctc gccgatctcg acgttgccga tcagcagggc
      661 aagcagcgac ggccgcacgg tgaccgactt cacctcgacc atgttgggat ttttcgatcc
      721 cggcatgttg aagaacttga cgccgtcgac cctgacgctt ggcaccggca gcagcgacag
      781 gcggatggga ccgtcgatca cgacgtcgcg acccgtcgcg cgcttcacct gcgcgacgat
      841 ttcgggcttg taggaatcga tatcgaccag cagaggcacg accaggagcg ccacgatcag
      901 gaggccgacg aggccaccgg cgctgatcaa gaatctcttg ctcgtggaca gggtcatgaa
      961 acgccccccg gtgcctgacg ctccaacact agggcatcgt ccgatggcgg gacaagattt
     1021 tcagcgacga tcatgccgaa aatcgacgtg ccgaatttgc tcgtggtcaa cagggacttg
     1081 ccggtggaaa aggccaccga ctgattgccg tgcgaaagcc cgtcggttag actcgtgaaa
     1141 tcaaacagcc gcggcgcggg ggagcgttgt aggtggtgcg agcgttttgc cggcggctgg
     1201 cctgcggggg cgggctgggc ctcgttcttg tggcgagctt gatagccgcc gcgccaccga
     1261 ttgccgctca aaccgtggac caggcggtca tcgccggggc gcgcgagatc attgcagacc
     1321 agaacgcgat catccgccaa tacagtccgc cgctcagaag gccgccttcc atcgggctca
     1381 gggtcaccgc tccagtcgcc ggcattgcgc ctgaacgcct ggccgagacc cgattccggc
     1441 tgaccgccgt cgatatcgtg ggcatgacct cgctcgatcc agcgacattc gcctttctct
     1501 ggcagggcct gatcggcagg gagatctcgc tgcttgatgt caaggccctg ctggagcgca
     1561 tcgagagtac cgccaggcag agggactacc tggttgtcgc cttggcgccg acgcaggatt
     1621 tttcgaccgg gcgcctccgt atcgtggtga gcgaaggcta catccgcgac ctggtcgtca
     1681 aaggcgatat cgccagattt ggcggacgcc tcgaaccctt tctcgcccgc gtcgccgcga
     1741 taagaccgct cagggtgtcg caagtctatc gccaacttct gatcatggaa gacctggcgg
     1801 gggtatcggt cgatgcgcat atgtcacgca tcgaggacga gccgggagcg gcacgtctcg
     1861 agctcacgat cagcttcaag cccggcgagc tcaatatcaa gctcaacaac tacggtgcgg
     1921 agggcatcgg cccgcttcag ggaggcgtgg tcgccgacat caacgatatg ttcggactgt
     1981 tcgaatcgac cgagttcctc gcggtcacca acccggcggc accccagcga ctgacgttcg
     2041 tcaggctgag ccagagcgtt ccgctgggtc cgaccggttt cagcttcagc tatggcatcg
     2101 ggcaatcatg gtcgaacccc gaaaccccgg aagccagggc actgcgcctc catgccgaag
     2161 tgaggaccgc caatgtcgcg ctgaactacg cgctgctgcg tgccgacgag cgcaacgtca
     2221 tcgtcagcgc cgcggtcaat ggcaacaata ccagcctgga catcgcgggc cagccggtcc
     2281 tccgcgaacg cacgcgctgg gtctcgttcg gcgccaaata caacgaccag atcggcggtg
     2341 tccacttcat cttgaatccg gtgttgatgc agggagtcga tgcactcgac gcgaacgtga
     2401 cacattcgca gttctctgca gcggcgattt ccgggaggat cacggcgagc ctcactgaaa
     2461 gtctcgaggc gacgcttctg ttcaacgccc agtacgcctt caacacgctg cccgcggcga
     2521 tgcttgtgaa ctacggcggc gataccttcg ggcgcggttt cgagcccggc gcaatccacg
     2581 gcaacagcgc ggtgctcggg tcgctggaac tcgctcaaaa gatcgacacc aggctctcgt
     2641 ggctgccggg cttcagcctg tgcaccttcg tcgattatgg tgcggtgtgg aatccgccgg
     2701 aattgtccgt ctatgaatac gcctctcttt catcgatcgg cttcggcatc cgcaccggtg
     2761 tcggccagca tctggtcgcc tccggcttcg tcgtgcagcc cctgggatac aacgtccagc
     2821 tcgcggccct tggactggac cagagcctga aattgcgctt cacgctgggg ctgcgtttct
     2881 agtggaagct gtcatggaac gtcccgttgc tatcgggccg tgaggcctaa aagataagct
     2941 tcggcgccca cccggtcgga cacggcaccg gcaaagccga catagccgtc ggggcggaca
     3001 aggctgaggt ccttggcgtc ggcccggatg gcggcaggcg gtgcctgcac cagccgcgga
     3061 aattttgccg ccagctcggc gacaacatcg gccgggccaa tggcggtgaa ccgtgccttg
     3121 cccgcatccg ccggcaggcg atcgcgccag cgcgcgcccg ccttcgttcc gttcgggcga
     3181 tgcgcgccgt tcaccgtcaa tgggctttcg ggatagccga tatcgagctc ggccagggtg
     3241 ttggcggcgc ggtgccccag ttggggaaac ccgaaagcga atttgaccac ggcgttgcgc
     3301 aacccttgcg cgatcggatt gcgcatgacg gctgcatccg tcatccgacc ggcattgcgc
     3361 aacaccatgt cgccgacggc actgcgctcg acggaatagc tgtcgagaag cgacggcttg
     3421 cagacgccgc cggagaccag cgacagcttc caggcaaggt tgaacgcgtc ctgcatgccg
     3481 gtattcatgc cctggccgcc ggccgggctg tgaatatggg cggcgtcgcc ggccaggaag
     3541 gcgcggccgc gtccgtattt cgagaccttg cgctcattga tgcggaatga ggcaagccag
     3601 taggcgtcct tgatgacgag agcgtccgag ccgcgccgcg tcaggagcga ctggatctcc
     3661 tccagggtcg gatcggcgtg gtggccttcc gtttgcgccg gtccgaggtc ggcgacgacc
     3721 cgccaccgcc cctgggtgat cgggaagaag gccaggatgc cgtccttgtg ccagtagatg
     3781 tgcagccggt cctgaccgtc gagccccgag atgtggccat cggcgaggta ccagtcgctg
     3841 ggctgcgtcg taccgtcgaa ggtgaagccc agcccgtgcc gcacggccga atgggcgccg
     3901 tcgcaaccga ccagccagtc ggccatgagg gtctcgctct cgccgctcgt tttgcgcatc
     3961 acggcctgaa ccttgtcgcc ctgatcgaca aaactctcca gcgcgacgtt gcgctcgacc
     4021 ttcacgcctt gcttctcgag gcgctcctcc agcacacgct cggtctcgct ctgggggatc
     4081 atcagggcgt aagggtagat gcagtcgatg tcgtcgaggc tgatccgcgc gatgacctcc
     4141 ttgccgttgg agatctgcgc gccatgcgcc ggcatgccgg ccgccaggaa ttcatcgacg
     4201 tatccggcat ggtcgaacaa ctccaagctg cggctccaca gcaccagggc tttcgacttg
     4261 tccgtccgtt cggcggcttt atcgacgatg cggaccgaaa cgccgtagcg cgtcagctca
     4321 ttcgccagag tcaaaccaac ggggcctgcc cccgcgatga gcacgttcac atttcccgcc
     4381 attcgatgct cccctgcact tcagtttggt acgccaatgt ccggctctct tgtcgtctcg
     4441 cgcgcggtca cccccgcgct gaagcgaagc gaaggatgac aggtgggtgg aaatcttaaa
     4501 agttccgtca cagcgccttc acggcctgca gcacctcgtt gacatggccc ggcaccttca
     4561 ccttgtgcca gattttggcc acggtgccgg tcttgtcgat caggaaggtt gcgcgctcga
     4621 tgcccatgta cttgcggcca tagaggctct tttccaccca ggtgccgtat ttctcgcaga
     4681 tcttgccgtc ctcgtcggac accagcggga agttgagccc gtacttcttc ttgaacttgt
     4741 cgtgccggtc gacgccgtcc ttggagacgc cgatcacctg cgccttgacc ttggagaagt
     4801 tgggcagcga atcgcgaaag ccgcaggcct cggcggtgca gcccgacgtg tcgtccttgg
     4861 gatagaagta gagcaccacc ggcttgcccc tgaggtcgga cagtttcagc ttgttgccgc
     4921 cgtcggtggt cgcgctgaag tccggcgcct tctttccctc ttcgacactc atccatcgcc
     4981 ccctttgtcc tcgcgtctcg gttgccagcc ggcggcgcgc gccggctcct cgacgatgcg
     5041 ccgatatata gcacgcgcgg ctgcggtttc cgccgcgatg cgcgcgcgca attcggcgag
     5101 gtcggcggcg ccttcggtgg cggcgatcag gcgctgctgg ccctccggtg ccttgctctc
     5161 gtcgaacgct gattcgtcgc cgtccagggt gagacgcagc aggctctgga cgtcggagag
     5221 caggatgcgc gtcgcgcgca accgttcggc atcggcgcgg tcgatgaacc cggcggcggc
     5281 ggcgcggcgc agcatctcgg caggatgcgg gtcgagcagg tcgggccgct ggttggcgtg
     5341 gcgcaacgcc agatattgcg ccacgaagtc gatgtcgaac aggccgccgg gcaggtgctt
     5401 gaaatcccac gggctcctgg gcggcgcgtg gcgggcgatg cggtcacgca tgtcggccac
     5461 gtcgcgcacc agcgtttcgc gatcgcgcgg tcggcagagc gttgatttga caatgtcgac
     5521 cagccgcgtg accagggccg gcggcccatg gatcacgcgc gcccggctga gcgccatgtg
     5581 ctcccaggtc caggccgact gcgcatggta gctctcgaag ccttcgagcg aattggcgag
     5641 cggcccggcg cgaccggacg ggcgcagccg catgtcgacc tcgtaaagcg tgccctcgtt
     5701 ggtatgggcg gtgagcgccg tcacgatctt ggcgctgagc cgcgtgtagt actggatcgg
     5761 cgccagcggc tgcggcccgt ccgaagcctc gaggccgggc gggatgtcgt agacgaagat
     5821 caggtcgaga tccgaggtgg ccgacatctc gcgactgccg agcttgccca tgcccagcac
     5881 cgccagacgc tggccgcgaa aaccgccatg tgcctcggcg aagcgccgct cgacccgatc
     5941 gcacagcgcg gagatggtgg cggcggcgac atcggagtag gcaagacccg cctgggccgg
     6001 ccgcacgatc gccttgagct gctgaacgcc gacctggaag cgccggtcgt tggcccagcg
     6061 ccgcgccagg tcgaggatgt cctgctcgtg atcgaccttg gcgagctggg cagcaaggtc
     6121 caccgtcatt tcgatcgccg agggcagcgg ccggtagaag tcgggtgaca gcaccgaatc
     6181 gagcaggagc gtgcggcgcg caagatgggc ggcaagcccc ggcgcgctgc ccatgatcgt
     6241 tgcgaccagg tcgagcagcg ccgggttggc cttgaacagc gagaagagct ggatgccggc
     6301 cggcaggttg ccgagaaaga gatcgaaatt cagcagcgcc tggtcgggcg cggcggtcga
     6361 acccagcgcc ttcaagagcc cgggcatcag ctcggtcaac agctcgcggg cccgcgccgt
     6421 ggcggtggcg cgaaagcgcc cgtgatgcca gcgccgcacg atgccggccg ccgccgagac
     6481 atcgcggaag cccaaggtgc ggagggtctg gagcgtgccg ggatcgtcgt cgctgccggt
     6541 gaacaccagg ttgccgcccg gcccggccag gctcggcgcc tcctcgaaca gccgtccata
     6601 gtggctttcc acgcagtgca ggcgttcgag cagctcgctc tggaaagacg tcgaatcggg
     6661 atagcccagg aaggtggcga tcgccgccac gccggcctcg tcggccggca gggtatgagt
     6721 ctggcggtcg tcgaccatct gcaggcgatg ctcgacggtg cgcaaaaagc cataggcttc
     6781 gaccagctcg tcggcgtcgg ccgccgtgac gtggcccgcg gcggcgagcg cgcgcaaggt
     6841 ctcgcaggtg ccgcgcaatc ggagcgcggg attgcggccg ccgaagatca gctgctgggt
     6901 ctgggcgaag aactcgatct cgcggatgcc gccgcgcccg agcttgacgt tgtggccgag
     6961 caccttgacg gcggagccac cgcgatgggc gtcgatctgg cgcttgatcg aatggatgtc
     7021 gtggatggcc gcgaagtcga gatgcttgcg ccagatgtag ggcgtgagct cggcgaggaa
     7081 ggcatggccg acggcaaggg tgccggccac cgggtgggcc ttgatcatgg ccgcgcgctc
     7141 ccagttctgg ccgacgctct cgtaataaag ctcggccgcc tgcaccgaca tggcaagcgg
     7201 cgtcgagccc gggtcgggac gcagcctcaa gtcggtgcgg aagatgtagc catcggccga
     7261 ggtctccgac atgagctgca ccagcagccg cgcgccgcgc acgaaatgcc gcgacagctg
     7321 gtcgttgccg ccgagcgccg gcgcgtcgcg gtcgtagagc aggatgagat cgatgtcgct
     7381 cgagtagttg agctcgccgg ccccgagctt gcccatgccg agcacggtga gcgccgccgc
     7441 gtcgggctcg ccgccgagac tgagctgccc gtcgcgctcg agctgcagca ggatcgaatc
     7501 ggtaagcgcg cccaggcacc ccgcggcgaa agcgctcagt tcgccggtca ccttgtcgag
     7561 cggccaggtt ccggcgatgt cggcgacggc gacggtcaag gctaggcggc gcttgagctg
     7621 gcgcagcttg gtcgccacca aggccggtag cgcgcccgcg cgcgcgtcgg cgcgcaccac
     7681 gtcgagttcg gcggcaagat cgaggcggac ggcatccggg ccgcggcgcc acagatcggt
     7741 cataaaagtc gggttttgta tcgccgtctc tgtcaaatac gggctgttgc cgaacagggc
     7801 gtcgagcaac gccacatcag cggggtcgtc gggacgcgcc gctttctcgc tccagcgcgt
     7861 ccacgcgacg tcgcgccgct ccagatcgtg cggtcgcggc aggcgagcgg tcgaaagcca
     7921 agacatgcga tggccgggtc gggtaagttg tcgaagtccg gcggcacgct cgcccaagcg
     7981 cgtcgccatc gtcaagaaac ttggaagtgt cggcctttgg tcaagcgaac ttatcggctg
     8041 tgtttgcgcg taacggtggg cgtcgtcctc gtcctggcca ccctggtcgt ggtcgcagtc
     8101 cttcgcttga tggcggggcc cgtcgacctt gacttcctga aggcgcggat cgtccaggcc
     8161 gccgacgtgc cgggcaacga catgaggccc gatgtcgatc gcatttccct ggaatggggc
     8221 ggcatcagcc agccgatgcg gctggtgttc accggcctgc gtttcctcag cggccagaac
     8281 caggtgatcg ccacggcacc gaccgtcgcg ctcaccttcg atccgcgcag cgtgttccag
     8341 ggcatgctgc tgccgacctc gatcaccatc gaaaagccga ccatcgaggc cgagatcgac
     8401 cgtgaaggcg gcatgctgcg ccgcatcttc tccgatccga gcgcgcaatc gcagggcgag
     8461 gcggtcagca tcctggtcga gcagctcctc gccgagccca actacaactc gctgatcggc
     8521 caacttgaca cgatcaagat cgagcaggcg aagctcacgt tgcgcgacac caagaccggc
     8581 ctcacctggg tcgctcccgc ggcccgcgcc gagctcaagc gcgatgcggg gggtgtcatc
     8641 atcgccgccg atgcgcgctt cagcggcggc gatccgttcg aggtctcgct gaccggcgtc
     8701 tatgcccgcg accgcagccg gatctcggtg gaagccaagg tcgacggcct gaaacccgcg
     8761 atgttcgccg acctgtcgcc cgacgccgtc ctgctgcgcg gcgtcgacat cgcgctgtcg
     8821 ggccggctgc gcatcgaagc ggacggcacc ggtgacatcc gccacgtcac catcgacgtc
     8881 accggcggca acggtcgcgt caccctgccg ggcatattgc cggcggcgca cccggtgaag
     8941 tcggtgacag cccgggcgac cgtggacgcg gccagccaca cggcgaagat cgagcggatc
     9001 gcgttcgatt tcggcgccgc caaggtttcg gtcgtcggca ccgggatgag gaccccggaa
     9061 ggccagaggt tcgccggccg cgccgagatg gtccgcattc cggtcgatcg cctgggcgac
     9121 tactggccgc tcgaattcgc gcccggcggc cgggcgtggg cgctcgccaa tctcagcaac
     9181 ggcgagatcg acagcgtcgc cgagttcgcg ctgagcgcgc ccggcaacga catggccgag
     9241 ctcaagatcg atcgcatggt cggcctgatc gactatcgcg gcatgaccgt gcgctacatg
     9301 ccgcgcatgc ccgagctgca aggcgtatcg ggcaaggcgc gctacgaggg cggcacgctg
     9361 catttcgacg tggcgagcgg cagcgcggtc gggctgcgca ccgccggcgc cacgatcgat
     9421 ctcacggggc tggacggtcc ggcgccgcaa tatgccgcga tccgcatgcc gatcgcgggc
     9481 tcggcgcagg acgtcatccg cttcctggca cggcccaagc tcggcctgcc gcgcgagatg
     9541 ctctatgact accggcggct cggcggtgac gtcacgatcg acgtttcgct cggctttcca
     9601 ctgctcgatg cgctgaccgt cgccgagctc gacatcaagg ccgaggcgtc ggtcgcccac
     9661 ttctcgctga aggacgtcgt gggcgaggtc ggcctcaccg acgcgacggc gcgggtcaag
     9721 tacgccaatt ccgaattgaa tgtcgccggc accggcaagc tcgacggcaa cttggtcgag
     9781 atcggctggc gcgagctgtt cggcgccaag gcgccgttcc gtcgtcgcta cgatctgaag
     9841 ggcacgctgc ctgccgccct gatcggcaag gcgggatttc cctcgccgga gccctacgtg
     9901 accggccccc tggccacgac cttgcactac caggtggcga ccaacggcac cggtgaagtg
     9961 gtcggccgct tcgagctcaa gggcgccacg gtcgcggcgc ggccgctcgc ctggaacaag
    10021 gagccgggca ccgacggtca actgctcctg gccgtgaagc tgttggccgg cggcaagctc
    10081 tcgacgatcg acttcgaggg ccgtgccaac ggccttttag gcaagggcca agtccgcttc
    10141 gccggcgaca atgccttgca gcagatcgcg ttgcagcagc tcaagatcgg ccggaccgac
    10201 gtcgcggtcg actggaagcg gacgccgaac ggcgtcgagc tcgcgctgcg cggcccctcg
    10261 ctcgagctgc cgcgcgtgcg ccacgcgatg aaggtgcgcg acgaattcgc cgccaagaat
    10321 cccgcggggc ccgccggcgc ggcacagagc agcaccaaga tgaccctgca gcttcagcag
    10381 gtgctgaccg agcgcggcac tctgggctat gccaacgggc ggctggaact ggcgggcgag
    10441 cgcatcgcgc tcgccgatct gacgatcggt gccggcacgg gctcgacctt ccgcgtcacg
    10501 ccggcaggca caggacgcac gctgttcctg tatgtcgctg atttcggcgc gatgctccac
    10561 gatgccggct ggctcgacgg cttggccaaa ggcaatctgc acatcgaagg ccgctatgac
    10621 gacagcgtcg ccggctcgcc gctggcgggc acgctgaaaa tgggcccgta tcgcctggag
    10681 aaggtgacgc agcggccggg cgtcggcacg ctcaactcgg cgatcgacgg cctcagccgc
    10741 gccggcaacg cgctgcagca gttcgacaat ctggaagcca acatcgccaa gaagggtgat
    10801 cgcatccaga tcaggaaagg ccgcaccagc ggccaatcga tcgggttgac ggcccagggc
    10861 ttcgtcgatc tcggcaagga taccgcacgg ctgagcggcg tggtggtgcc gggcttcgcc
    10921 ctgaacaacc tcctgtcgaa cgtgccgctg cttggaccgc tgctcaccgg cggcaaggac
    10981 ggcggcgtgt tcgcgatttc ctaccagctt cacgggccgc tcgacgacct caagaccgac
    11041 atcaacatga tgtcggcggt gacgccgggc gcgttgcgcg agctcttcaa cggaccggcc
    11101 gacggctacc agccgccggc ctcgcaagag atgcagcgcg cgccttaagc ggcgcgcacc
    11161 agcacgtggc gcttgcggcc ggcggagagt tttagcgtgc ccgacgaatc gaggtcgctt
    11221 tcgccgatcc tcgccgtgtc ggccgcgatc ggctggtcgt tcagccgtgc gccgccgccc
    11281 ttgatcagct tgcgcgcctc ggtgcggctt tccgccaggc ccgcctcatg aaggagttcg
    11341 aatgccgcga tgccggcggc aagccttgtc cgcggcacat cgacagtggg cagcgtgtcg
    11401 gccttgccgc cttcctcgaa ggtacgccgg gcggtttcgg ccgcctgctc cgccgccggc
    11461 ttgccgtgcg ccagcgtggt gactgcggtc gctagaatct tcttggcttc gttgatctcc
    11521 tggcccttca gcgcctcgag cttggcgatc tcgtcgagcg gcagctcggt gaacagtctc
    11581 aggaaccggc cgacatcctc atcctccgcg ttgcgccagt attgccagaa atcgtagggc
    11641 ctcagccgcc cggggttgag ccacaccgcg ccggcggcgg tcttgcccat cttggcgccc
    11701 gagctggccg ccagcagcgg cgaggtgagc gcgaacagct ccgctccctg catgcggcgg
    11761 ccgagatcgg cacccatgac gatattgccc cactggtccg aaccgcccat ctgcaggatg
    11821 cagtggtggc gcttgtgaag ctccacgaag tcgtaggact gcaggatcat gtagttgaat
    11881 tcgaggaagg aaagcggctg gtcgcgctcg agccgcagct tcaccgaatc catgctcagc
    11941 atgcggttga ccgagaagtg gcggccgacg tcgcgcagca gcgggatgta gagcagcgtg
    12001 tcgagccagt cggcgttgtt ggccatgacg gcgtcggtcg gcccgtcgcc gaaggccagg
    12061 tagttggcga agctccgctt gatgctcgcc atgttggcgt cgatctgctg cggcgtcagc
    12121 aactggcgcg tttcgtcgcg gcccgacggg tcaccgacct tggtggtgcc gccgcccatc
    12181 agcgcgatcg gcttgtggcc ggtcttctgc caccagcgca gcagcatgac ctgcagcagg
    12241 tgcccgatat gcagcgagtc ggccgtgcag tcgaagccga tataggccgt gcgcgtgccg
    12301 gtcgacagca gctcgtcgag gcgcgccgcg tcgctgcact gatgcaccat gccgcgctcg
    12361 tgcacgatcc gcatgaagtc cgacttgaag cccgccatct ctccgctcga cgaatttgtc
    12421 catgaagggc cgcggatgta acatagagct gttcgcgtct caacggagcg tgatttggcc
    12481 aacctcatcg cacaacgggt tgaactcgca cggcgcggac ggaaccgcgg gcatttgaac
    12541 gccggccggc cggcatgatg cgcgcgctcg gcctgatgag cggcacttcg gttgacggcg
    12601 tggacgtggc cctcatcgaa accgacggcg agcgcgtcga agcattcggg gccaccctga
    12661 ccgtgtctta tccggacgat gtacgccgca cgatccgcgc cgctttcggc gcggaacaag
    12721 caagcgaaac aacccgtgca gccgagcggg cgataaccga cgcgcacatc gatgccgtgc
    12781 ggcgatggtc ggtggaacat ggcacgcccc tcgcaagcct cgacatcgtg ggtttccacg
    12841 gccagaccat cacgcatcgg ccggaaaagc acttcacctg gcagatcggc gatggcgccg
    12901 cccttgccag ggcgctcggc gtgcgggtgg tggacgacct gcgcggcgcc gatgttttag
    12961 caggcgggca gggtgcaccg ctggtgccga tctatcatgc ggcgctcgtg cgcgacctgc
    13021 cgcggccgct cgcggtgatg aatatcggcg gcgtcgccaa tgtgacgtgg atcggtgcgg
    13081 acgacgcgct gctcgccttc gacaccggcc cgggcaatgg gccgatcgac gattggtgcg
    13141 ccaggcgtgc cggccggcgc ttcgacgagg acggcgcgct cgccgcatcg ggcaaggtcg
    13201 atcgcccacg cctcgaacgc ttcagcgagc accgctactt cgcgcgcaag ccgcccaagt
    13261 cgctcgatcg cggcgacttc aac
//
LOCUS       DASWGA010000074         5669 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2157256, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000074 DASWGA010000000
VERSION     DASWGA010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5669
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2157256"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..954)
                     /locus_tag="VF991_01680"
     CDS             complement(<1..954)
                     /locus_tag="VF991_01680"
                     /inference="COORDINATES: protein motif:HMM:NF019307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9555173.1"
                     /translation="MTKKLESDLVSILSDLIALPSPYPPGTSVGICAYAARRLRKAGY
                     KVEIATKTKGVDNVVARLKGKGKWPTIAFNAHVDTVGVGERANWKSDPFKAVMKGGLV
                     YGLGAGNCKGSMAVQLWLAEEIACRGGPARGELLFTFVADEENLGPDGMEFLRKSGKV
                     RPDALILGAQTENNLIVAERGVMWARLTTKGKTAHAGNPSAGDNAILRMMRLVGALQA
                     FYDKALPKRTRGAMKSTVNVGMFHGGHNTNVVPSACTVEIDRRLLPDEKVKDAFKELK
                     RVIDGVGEPKGTYAVEFLTGTNGFFAPENGAAVGAFETAVKA"
     gene            complement(969..2210)
                     /locus_tag="VF991_01685"
     CDS             complement(969..2210)
                     /locus_tag="VF991_01685"
                     /inference="COORDINATES: protein motif:HMM:NF006769.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HEX9555174.1"
                     /translation="MSGANAVREDRLWQRHADMAKLGGTPKGGVNRQALSPEDAAARN
                     LLASWAKARGFSIFTDTIGNLFVRREGTDAKAQPVMSGSHMDSQPTGGRFDGMYGVLA
                     AFEALEALEDAGVRTRRPVMAVAWTNEEGSRFQPGAMGSAVFAGRNKLEDMLAVKDWD
                     GMALSDALADTMKAAPAPMREGKPGFPLDFYVEVHIEQGPRLENERKIIGVVTGIQGS
                     RRYIVHTEGEEAHAGTTPRANRKDAFAAATRIAAAMYEATADADDTLRFTIGRVDVHP
                     GSPNTVPGKASFTIDMRHPQDVVLEAHEKKLLDIVAARAAPCIARIDRVTAVAPTDFD
                     RRVIDLVRAKADTLKLSNMDMPSGAGHDAMHIAKLCPAGMIFVPCERGVSHNESENAT
                     PADLAAGARVLVEVLVELANR"
     gene            2279..3187
                     /gene="puuE"
                     /locus_tag="VF991_01690"
     CDS             2279..3187
                     /gene="puuE"
                     /locus_tag="VF991_01690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008552039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase PuuE"
                     /protein_id="HEX9555175.1"
                     /translation="MHNHLDRNLIGYGPSPPDPQWPGEARIAVSFVLNYEEGGENTIL
                     NGDAASEVFLTETPGGTPIQGGRDLSTESMYEYGSRAGFWRILRLFGERNMRFTSWAV
                     GRALELNPIAGKAMAQAGHEVASHGWRWINYRDFTLEQELLHIQRAVKAIADTAGKPP
                     VGWYTGRFGMNTLSAVIKHGGFLYSSDSYNDDLPYWVSVNDTPHLIIPYTLEVNDMKF
                     GVAPGYTSGDGWLQAMKDSFDVLYTEGSRSPKMMSVGLHCRLVGRPSRAATLARFLDY
                     VASRPKVWVATREEIARHWMKVHPAA"
     gene            complement(3320..3763)
                     /gene="trxC"
                     /locus_tag="VF991_01695"
     CDS             complement(3320..3763)
                     /gene="trxC"
                     /locus_tag="VF991_01695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006412084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006662 - glycerol ether metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxC"
                     /protein_id="HEX9555176.1"
                     /translation="MAETLIVACPACNTLNRAPREKLAAGNGGKCGHCGSPLFGGHPV
                     ALDAASFESHAVKSDIPLLVDFWAPWCGPCKAMAPQFEKAASQLEPSVRLAKVNTDDE
                     RELAGRFQIQGIPTMVLLKHGKEIARQSGAMNAAGIENWVQQALR"
     gene            3956..>5669
                     /locus_tag="VF991_01700"
     CDS             3956..>5669
                     /locus_tag="VF991_01700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555177.1"
                     /translation="MTGTWQPKQPRPSFWPGEMFLLTDGSVFCHEWQTLRWWRLWPDS
                     SGSYFTNHWQPAASMHDLRIFSGGTMMADGRVLIAGGYWVANNNTFPPVTTIEIYDPL
                     ADTWSKFDGPPKLLDDKTICSAIGDGRILVASPTTTDCGVYDPMMGNWVQAGQGKSWS
                     AIDEIWALLPDGNMFANKSIQPKFQSSESYIPGQGKWVVTATAPVDLTGSPFFGSQSG
                     TGVLLTDGRVFFVGASGHTAFYRPAPNVNAPGTWDVGPDLPLNSHGHPMRAWDSPIVL
                     LPNGNVLFQAYAQEWGNGGWSGDQEHFFEFNLQTEFPELVDVSLPVEPGLQRTEFRML
                     LLPTGQVLLMAAGETPQHKAVWENWIYTPDGAPFDSWRPKITLHPSSIQAGSIYPLRG
                     QQINGLSQAVCHGDFVSGATNYPLVRLHQASSGKVWYCPTAGHSSMAVATGTAVNSTT
                     FLVPNGVALGKLDLSVVANGIESAPVTVQMKPSRPPFMVDGGLVNQLVGSLADGPLWA
                     LGPNGPVPIGPFNGRLRGEAVRATQSIVEGLRQLQHVGQEVLAKRAEAAAAHPGPTRF
                     LGKPA"
BASE COUNT          907 a         1923 c         1839 g         1000 t
ORIGIN      
        1 ggccttcacc gccgtctcga aggcgccgac ggcggcgccg ttctccggcg cgaagaagcc
       61 gttggtgccg gtcaggaatt cgaccgcgta cgtccccttc ggttcgccga cgccgtcgat
      121 cacgcgcttc agctccttga aggcgtcctt caccttctcg tcgggcagca ggcggcggtc
      181 gatctcgacc gtgcaggccg acggcacgac gttggtgttg tggccgccat ggaacatgcc
      241 gacgttcacc gtcgacttca tggcgccccg ggtccgcttc ggcagcgcct tgtcgtagaa
      301 cgcctgcagc gcgcccacca ggcgcatcat gcgcaggatg gcgttgtcgc cggccgacgg
      361 gttgccggca tgggccgtct tgcccttggt ggtgaggcgg gcccacatga cgccgcgctc
      421 ggccacgatc aggttgttct cggtctgcgc ccccaggatc agcgcgtcgg gccgcacctt
      481 gccgctcttg cgcaggaact ccatgccgtc gggcccgaga ttctcctcgt cggccacgaa
      541 ggtgaacaga agctcgcccc tggccggccc gccgcggcac gcgatctcct cggcgagcca
      601 gagctgcacc gccatgctgc ccttgcagtt gccggcgccc agcccgtaga ccagcccgcc
      661 tttcatgact gctttgaacg gatcgctctt ccagttggcg cgctcgccca cgcccaccgt
      721 gtcgacatgg gcgttgaagg cgatcgtcgg ccatttgcct ttgcccttca ggcgcgccac
      781 gacattgtcg acgcccttgg tcttggtcgc gatctcgacc ttgtagccgg ccttcctcag
      841 acgccgagcg gcgtaggcgc agatcccgac cgaggtgccg ggcgggtagg ggctcggcag
      901 ggcgatcagg tcggacagga tggagacaag gtcggactcg agtttcttgg tcacaactct
      961 tccttcgatc aacgattcgc cagctccacc aacacctcga ccagcacgcg cgcgccggcg
     1021 gcgaggtcgg caggcgtggc gttctcgctc tcgttgtggc tgacgccacg ttcgcagggc
     1081 acgaagatca tgccggcggg gcaaagcttg gcgatgtgca tggcgtcatg gccggcaccg
     1141 gacggcatgt ccatgtttga gagcttcagc gtatcggcct tggcgcgcac caggtcgatg
     1201 acgcggcgat cgaagtcggt cggcgccacc gccgtcacgc gatcgatgcg cgcgatgcaa
     1261 ggcgcggccc gcgcggcaac gatgtccaaa agcttcttct cgtgcgcttc caggacgacg
     1321 tcctgcggat ggcgcatgtc gatggtgaag ctggccttgc cgggcacggt gttgggcgag
     1381 ccgggatgga cgtcgacccg accgatggtg aagcgcaaag tgtcgtcggc atcggccgtg
     1441 gcttcgtaca tcgccgcggc gatgcgggtg gcggcagcga aggcatcctt gcggttggcg
     1501 cgcggcgtgg tgccggcatg cgcttcctcg ccctcggtgt gcacgatgta gcgccggctg
     1561 ccctggatgc cggtgacgac accgatgatc ttgcgctcgt tctccagtcg cggaccctgc
     1621 tcgatatgca cctcgacata gaagtcgagc ggaaagccgg gtttgccctc gcgcatcggt
     1681 gcgggcgcgg ccttcattgt gtcggccagc gcgtcgctca gcgccatgcc gtcccagtcc
     1741 ttcaccgcca gcatgtcctc gagcttgttg cggccggcga acaccgcgga gcccatggcg
     1801 ccgggctgga agcgcgaacc ctcctcgttg gtccaggcga cggccatcac cggccgcctg
     1861 gtcctcaccc cggcatcttc cagcgcctcc agcgcctcga aggccgccag cacgccatac
     1921 atgccatcga atcgcccgcc ggtcggctgg ctgtccatgt gcgagccgct catcaccggc
     1981 tgcgccttgg cgtcagtgcc ctcgcggcgc acgaagagat tgccgatcgt gtcggtgaag
     2041 atcgagaagc cgcgcgcctt tgcccaggac gcgagcaggt tccgggccgc cgcgtcctcc
     2101 ggcgacagcg cctggcgatt gactccgccc ttgggcgtgc cgcccagctt cgccatatcg
     2161 gcgtgccgtt gccacagacg gtcctcgcgg acggcgttgg caccgctcat gcattctctc
     2221 cagacttgtt ggccgagcta tagcggcccc atagtcgcgc ttcaatcggg aggcccgcat
     2281 gcacaatcat ctcgaccgca acctgatcgg ctacggcccc agcccgcccg atccgcaatg
     2341 gccgggcgag gcgcgcatcg ccgtcagctt cgtgctgaac tacgaggagg gcggcgagaa
     2401 caccatttta aacggcgacg ccgcgtcgga agtgttcctg accgagacgc cgggcggcac
     2461 gccgatccag ggcggtcgcg acctctcgac ggagtcgatg tacgagtacg gcagccgcgc
     2521 cggcttctgg cgcatcctgc gcctgttcgg cgagcgcaac atgcgcttca cctcgtgggc
     2581 ggtcggtcgc gcgctggagc tgaacccgat tgccggcaag gcgatggccc aggccggcca
     2641 cgaggtggcg agccacggct ggcgctggat caactacaga gacttcaccc tcgagcagga
     2701 gctcctgcac atccagcgtg cggtgaaggc gatcgccgac acggcgggca agccgccggt
     2761 cggctggtac accggccgct tcggcatgaa cacgctgtcg gccgtcatca agcatggcgg
     2821 cttcctctat tcgagcgatt cctacaacga cgacctgccc tactgggtca gcgtcaacga
     2881 cacgccgcac ctgatcattc cctacacttt ggaagtgaac gacatgaagt tcggcgtggc
     2941 ccccggctac acctccggcg acggttggct gcaggcgatg aaggacagtt tcgacgtgct
     3001 ttataccgag ggctcgcgca gccccaagat gatgtcagtc gggctgcatt gccgattggt
     3061 cggccggccg agccgcgccg cgaccctggc gcgcttcctc gactacgtcg cctcccggcc
     3121 caaggtctgg gtggcgacgc gcgaggagat cgcgcggcat tggatgaagg tgcatccggc
     3181 ggcgtgacgc acggccgcgc cacgacaaag ttgtcatccc gagtcgcgcg gatcagatcc
     3241 gcgctgaagc gagggacctt tcctggtgcc ttaaaggccc ctcgcttcgc tcggggtgac
     3301 agattggcgt cgctggccgc tagcgaagcg cctgctgcac ccaattctcg ataccggccg
     3361 cgttcatcgc gccggactgg cgagcgattt ccttgccgtg cttcagaaga accatcgtcg
     3421 gaattccctg gatctgaaac cggccggcca gctcgcgctc gtcatcggtg ttgaccttgg
     3481 ccagccgcac cgacggttcg agctggctgg ccgccttttc gaactgcggt gccatggcct
     3541 tgcacggccc gcaccacggc gcccagaagt cgacgagcag ggggatgtcg ctcttcacag
     3601 catgcgattc gaagcttgcg gcatcgagcg ccaccggatg cccgccgaat agcggtgagc
     3661 cgcagtgacc gcacttgccg ccgttgcccg ccgccagctt ttcgcgcggg gcgcggttca
     3721 gggtattgca agccgggcag gcgacgatca gggtttcggc catggcgaac ctcgctgatg
     3781 attaatgaag aatgccgcgg gagccactac gttgcatcca aagagctgtc cggcgagggg
     3841 ctgattgtcg gcatctggcg ccgaaatagt cctgcgcggc ggccctcgcg tggtggtgga
     3901 acgccgcgcc gtgtactaat ctcaggttgc aggtcgttgc aaaacggggg gtcgcatgac
     3961 aggcacctgg caacccaagc agccgcgtcc gagcttctgg cccggcgaga tgttcctcct
     4021 caccgacggc agtgtcttct gccacgaatg gcagacgctg cgatggtggc gcctgtggcc
     4081 ggattcgtcg ggcagctact ttaccaatca ctggcagccc gccgcctcaa tgcacgatct
     4141 gcgcatcttc agcggcggta cgatgatggc cgacggacgc gtgctcatcg ccggtggcta
     4201 ctgggtcgcc aacaacaaca cgttcccgcc ggtgacgacc atcgagatct acgatcccct
     4261 ggccgacacc tggagcaagt tcgacggacc tcccaagctg ctcgacgaca agacgatctg
     4321 cagcgccatc ggcgatggcc gcatcctggt cgcatcgccg accacgaccg actgcggcgt
     4381 gtacgatccg atgatgggga attgggtgca ggccggccaa ggcaagagct ggagcgcgat
     4441 cgacgagatc tgggcgttgc tgcccgacgg caacatgttc gccaacaagt cgatccagcc
     4501 caaattccag tcgtccgaga gctacatccc gggccaaggc aagtgggtgg tcacggcaac
     4561 cgcgccggtc gatctgaccg gctcgccttt cttcggctcg caatcaggaa ccggtgttct
     4621 tctcaccgat gggcgcgtct ttttcgtcgg cgccagcggc cacacggcgt tctacaggcc
     4681 ggcgccgaac gtcaacgctc ccggcacctg ggacgtcggc cccgacctgc cgctcaactc
     4741 gcacggccat ccgatgcgcg cctgggattc gcccatcgtc ctgctgccca acggcaacgt
     4801 gctgttccag gcctacgccc aggaatgggg caatggcggc tggagcggcg atcaggagca
     4861 cttcttcgaa ttcaacctgc agacggaatt tcccgagctc gtcgacgtgt cgttgccggt
     4921 cgagcccggc ctgcagcgca ccgaattccg catgctcctc ctgccgaccg gccaagttct
     4981 gctgatggca gcgggtgaga cgccacagca taaggccgtg tgggagaact ggatctacac
     5041 gccggatggc gcgccgttcg acagctggcg gccgaagatc accttgcatc cgtcctcgat
     5101 ccaggccggc tccatctatc ccttgcgcgg acaacagatc aatggattgt cgcaggccgt
     5161 ctgccatggc gacttcgttt cgggcgccac caactatccc ctggtgcgcc tgcatcaggc
     5221 ttccagcgga aaggtctggt attgcccgac cgcgggccat tcgagcatgg cagtcgcgac
     5281 cgggaccgcc gtcaacagca cgaccttcct ggtgcccaac ggcgttgctc tcggcaagct
     5341 cgacctcagc gtcgtcgcca acggcatcga atcggcgccg gtcaccgttc agatgaagcc
     5401 gtcgcggccg cccttcatgg tcgacggcgg gttggtcaat cagttggtgg gcagccttgc
     5461 cgatgggccg ttgtgggcgc tcgggccgaa tggtcccgtg ccgatcggac cgttcaacgg
     5521 ccgtctgcgc ggcgaggcgg tgcgcgccac ccagtcgatc gtcgagggcc tgcgccagct
     5581 tcagcatgtc ggccaggagg tgctggccaa acgcgctgag gccgcggcgg cacaccccgg
     5641 gccgacgcgc ttcctgggca agccggcaa
//
LOCUS       DASWGA010000075         3228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2157356, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000075 DASWGA010000000
VERSION     DASWGA010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3228
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2157356"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VF991_01705"
     CDS             <1..445
                     /locus_tag="VF991_01705"
                     /inference="COORDINATES: protein motif:HMM:NF014533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEX9555178.1"
                     /translation="RNRIVSGLSAGVVVVEAAARSGSLITAQCAAEQGREVFVVPGSP
                     MDPRYAGSNSLIRDGAILTRDANDILGVLGRPRPDPQPLAKPSQKPVEPTAARVLAAL
                     GSVPTAVDELGRRCQVSAAAMAEVLLALELEGRLERHRGNRVSLM"
     gene            496..3195
                     /gene="topA"
                     /locus_tag="VF991_01710"
     CDS             496..3195
                     /gene="topA"
                     /locus_tag="VF991_01710"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEX9555179.1"
                     /translation="MDVLVVESPAKAKTIGKYLGPGYTVLASYGHVRDLPPKDGSVRP
                     DEDFAMDWEVDPQSQKRLDAIAKALTRGGKLYLATDPDREGEAISWHVRDVLRAKKAL
                     TGVDVKRVTFNAITKQSVLDAVAHPRELDQPLIDAYMARRALDYLVGFTLSPVLWRKL
                     PGSRSAGRVQSVALRLICEREAEIEVFKSREYWTVDAIFGTAKKQTLKARLTHLDGRK
                     LDKFDLDTAERAEQAKREIERRAFSVISIDRRQVRRNPPPPFITSTLQQEASRKLGLG
                     AATAMRIAQRLYEGVDIGGETVGLITYMRTDGVQLAPEAIGQTRRLIESKYGDAYLPE
                     KPRVYSSKAKNAQEAHEAIRPTDLFRTPQDVAAHLDKDQLGLYELIWKRTVASQMESA
                     VLDQVTVDIASGDKTVQLRATGSVVKFNGFLTLYDEGKDEKSEDEEGNTILPDVAPDE
                     ALERREVLPEQHFTEPPPRYSEASLVKKLEELGIGRPSTYASIIEVLQRRNYVRIDRK
                     RFVPEDRGRIVTAFLQTYFPRYVEYNFTAHLEEELDDISDGKIDWRQVLREFWKAFSA
                     AVGETKELRVKEVLDKLDEELGPHFFPANDNGGKSPRDCPSCANGRLGLKLGKFGAFI
                     GCSNYPECRFTRKLGIVDAEADAASGANLDGPKILGIDPVTGKPVTLRNGPYGLYVQL
                     GEPEGKEKPKRQSLLKGMTPDEVTLDKALALLSLPRELGPHPDDGEQILAGVGRFGPY
                     VKHGSKYKTIPTDESVLDIGMNRAVALLAEAKSAGRGRAAKPIRIVGNHPADEAPVEL
                     YEGRYGPYVKHGGVNATVPRDLKPEELTLDQAVALLAERAAKGPPAKKPPRARKAKAN
                     GAADPAAPANDAGAKPAKKKAAAKRKAAKDKKAAPPPRTGTDG"
BASE COUNT          591 a         1149 c         1031 g          457 t
ORIGIN      
        1 ccgcaaccgc atcgtcagcg gcctctcggc cggcgtcgta gtggtcgagg cggcggctcg
       61 ctcgggctcg ctgatcaccg cccaatgcgc cgcggaacag ggccgcgagg tgtttgtcgt
      121 gcccggctca cccatggacc cgcggtatgc cggctccaat agccttatcc gggatggggc
      181 cattttgacg cgcgacgcca acgatattct aggtgtgctc gggcggccac ggcctgaccc
      241 ccaacccctt gcgaaaccaa gccaaaagcc ggtcgaaccg acggccgccc gggtcctcgc
      301 cgccctcggc tcggtgccca ctgcggttga cgaattggga cgccgatgcc aagtgtccgc
      361 cgccgccatg gcggaggtcc tgctggccct ggagctggag ggccgcctgg agaggcaccg
      421 gggtaaccgc gtatctctga tgtagatcag tgatttagct ccggttcttg tgtaccactg
      481 gagcatgttc cggcgatgga cgtattggtc gtcgagtccc cggccaaggc taagacgatt
      541 gggaagtatc tcggccccgg ctacaccgtg ctggcctcct atggccatgt ccgcgacctg
      601 ccgcccaagg acggttcggt ccggccggac gaggatttcg ccatggactg ggaggtcgat
      661 ccccagtccc agaagcggct cgacgccatc gccaaggcgc tgacccgggg tggcaagctc
      721 tatctcgcca ccgaccccga ccgcgagggc gaggccatct cctggcacgt ccgggacgtg
      781 ctcagagcca agaaggcgct gaccggggtc gacgtgaagc gcgtcacctt caacgccatc
      841 accaagcaat cggtgctcga cgccgtcgcc caccctcgcg agctcgatca gccgctgatc
      901 gacgcctata tggcgcgccg cgcgctcgac tacctggtgg gcttcaccct ctcgcccgtg
      961 ctgtggcgca agctgccggg cagccgttcg gccggccgcg tgcagtcggt ggcgctgcgc
     1021 ctgatctgcg agcgcgaggc cgagatcgag gtcttcaaga gccgcgaata ctggacggtc
     1081 gacgcgatct tcggcaccgc caagaagcag acgctgaagg cccgcctcac ccatctcgac
     1141 ggccgcaagc tcgacaagtt cgacctcgac accgctgaac gcgccgagca ggccaagcgc
     1201 gagatcgagc gccgcgcctt ttccgtcatc tcgatcgatc gccgccaggt gcggcgcaac
     1261 ccgccgccgc ctttcatcac ctcgaccctg cagcaggagg cctcgcgcaa gctgggtctg
     1321 ggcgccgcca ccgccatgcg catcgcccag cggctctacg agggcgtcga tatcggcggc
     1381 gagaccgtag gcctcattac ttatatgcgg accgacggcg tgcagctcgc ccccgaggcg
     1441 atcggccaga cccgccggct gatcgaaagc aaatacggcg acgcctacct gccggaaaag
     1501 ccgcgggtct actcctccaa ggccaaaaac gcccaggagg cgcacgaggc gatccgcccg
     1561 accgacctgt tccgcacgcc gcaggacgtc gccgcccatt tggacaagga ccagctcggc
     1621 ctctacgagc tgatctggaa gcgcaccgtg gcaagccaga tggaaagcgc ggtgctcgac
     1681 caagtgacgg tcgatatcgc cagcggcgac aagaccgtgc agctccgcgc caccggctcg
     1741 gtggtgaagt tcaacggctt cctcaccctc tacgacgagg gcaaggacga gaagagcgag
     1801 gacgaggaag gcaacaccat cctgcccgac gtcgccccgg acgaagcgct ggagcgccgc
     1861 gaggttttac ccgaacagca tttcaccgag ccgccgccgc gctattccga agccagcctg
     1921 gtcaagaagc tggaggagct cggcatcggc cggccctcga cctatgccag catcatcgag
     1981 gtgctgcagc ggcgcaatta cgtgcggatc gaccgcaagc gcttcgtgcc cgaggaccgc
     2041 ggccgcatcg tcacggcttt cctgcagacc tatttcccgc gctacgtcga atacaacttc
     2101 accgcccatc tcgaggaaga gctcgacgac atctccgacg gcaagatcga ctggcgccag
     2161 gtgctgcgcg aattctggaa ggccttctcc gccgctgtcg gcgagaccaa ggagctgcgc
     2221 gtcaaggagg tgttggacaa gctcgacgag gagctgggac cgcatttctt cccggccaac
     2281 gacaacggcg gcaagagccc gcgcgactgc ccgtcctgcg ccaacggccg gctcggcctg
     2341 aagctcggca agttcggcgc cttcatcggc tgctcgaact atccagagtg ccgcttcacc
     2401 cgcaagctgg gcatcgtcga tgccgaggcc gacgccgcct cgggcgccaa tctcgatggc
     2461 ccgaagatcc tgggcatcga tcccgtgacc ggcaagccgg tcaccttgcg caacggcccc
     2521 tacggcctct acgtccagct cggcgagccc gagggcaagg aaaagcccaa gcggcagtcg
     2581 ctgctcaagg gcatgacgcc cgacgaggtg accttggaca aggcgctggc cctgctctcg
     2641 ctgccgcgcg agctggggcc gcatcccgac gacggcgagc agatcctggc cggcgtcggc
     2701 cgcttcggcc cctacgtcaa gcacggcagc aaatacaaga cgatcccgac cgacgagagc
     2761 gtgctcgaca tcggcatgaa ccgcgccgtg gcgcttttag ccgaagccaa gagcgccggc
     2821 cgcggccgcg cggccaagcc gatccgcatc gtcggcaacc atcccgctga tgaggcgccg
     2881 gtcgagctct acgagggccg ctacggtccc tacgtcaagc atggcggcgt caacgccacc
     2941 gtgccgcgcg acctcaagcc ggaagagctg acgctcgatc aggcggtggc gctgctggcc
     3001 gagcgcgccg cgaaggggcc gcccgccaag aaaccgccgc gcgcccgcaa ggccaaggcc
     3061 aatggcgcgg ccgatccggc ggctcccgcc aatgacgccg gcgccaagcc ggccaagaag
     3121 aaggccgccg ccaagcgcaa ggccgccaag gacaagaagg ccgccccgcc gcctcgcacc
     3181 ggaaccgatg gctaagggca aggtcccgac ccgcgacgaa ctgctggc
//
LOCUS       DASWGA010000076         3101 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_389532, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000076 DASWGA010000000
VERSION     DASWGA010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389532"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VF991_01715"
     CDS             <1..479
                     /locus_tag="VF991_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555180.1"
                     /translation="PKALEEVQPEEFAGIVDANLKGCFLFARAVAPGMKKAGTGRIVT
                     ISSRAGLSTSLTGIQAYASAKHGQVGLVKQLAQELGPFGITVNSVAPGFMATSPDYER
                     QWNSYSEEFRRSFADRIAMRRMGRPEDIADAVLFLASDRASWITGQILPVTGSPLA"
     gene            497..1414
                     /locus_tag="VF991_01720"
     CDS             497..1414
                     /locus_tag="VF991_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008121637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HEX9555181.1"
                     /translation="MPDTHAPQLEPWQWSEDHWRKLVAQVRAGRSYRPKAWKDGARCA
                     VALSFDSDHETNELRDGGKSIGRMCWGQYGTRVGVPRIRALLARHGVKATFYVPAVSA
                     LLHPEEQRALVADGHEIGIHGWIHELNSVLPYEAERDLMLRSADTLEKITGKRAVGLR
                     TPSWDFSPNTLAIEKEMGLFYDSSLMADEDCYELLLHGEPTGVVELPVEWVRDDAVYF
                     SMHRFSSLRPYTPPTDVLETFRRELDAAWEESGIFQLTMHPHIIGYRSRIWIVDELIR
                     HAKSKGQGKDAVWFATHEEVARYAKEHAA"
     gene            1411..2157
                     /locus_tag="VF991_01725"
     CDS             1411..2157
                     /locus_tag="VF991_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555182.1"
                     /translation="MSKTAIVTGGARGIGRGCALELAARGYDIALVDLLEPEMKRTAG
                     EIEALGRKTLAYKADVASFARAHEVVADVARQWSAVDFLLNDAGGPNPKGILEIKEEE
                     FDRTIAVNLKSCFNYIHAAAPIMLKQEAGGRIVSMSSLNALSGGVTSAVSKHSYAAAK
                     AGILGLTRSLAKELGPKIMINAICPGVIETELGNSLTKSRGPELTKGIMLNRLGKPAD
                     VAQLVAFLATSEPCYITGQHFVIDGFQWSC"
     gene            complement(2159..2446)
                     /locus_tag="VF991_01730"
     CDS             complement(2159..2446)
                     /locus_tag="VF991_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555183.1"
                     /translation="MNGKQFLEMLARLPARVWLQAILGLVGFVVLAVLGFAVIAGVAA
                     IIVLAILAIKAKTWFHSLFAPPPPGPPARTDRKVIDVQYEIVDKRSDDIRR"
     gene            complement(2443..>3101)
                     /locus_tag="VF991_01735"
     CDS             complement(2443..>3101)
                     /locus_tag="VF991_01735"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEX9555184.1"
                     /translation="AEMICSVVQTPLIADADTGYGGLLNVQRTVRGYEAAGVAAIQIE
                     DQEMPKKCGHTPGRRVVPAEEMVLKIKVAAEARRHPETMIVARTDARTAHGLDEALRR
                     AKLYEEAGADVIFVESPESEAELERIGREVSKPLLANMVEFGKTPRVEAARLRQWGFD
                     LAIYPGLGFSVAAEAMRQAWEHLKDKGTSKGMNVPQFTGMHELMGFPDVWEFEKRWTS
                     "
BASE COUNT          519 a         1068 c          999 g          515 t
ORIGIN      
        1 ggcccaaggc tctggaagag gtccagcccg aggagttcgc cggcatcgtc gacgccaacc
       61 tgaaggggtg cttcctgttc gcccgcgccg tggcgcccgg catgaagaag gccggcaccg
      121 ggcgcatcgt caccatctcg agccgcgccg ggctcagcac cagcctgacc ggcatccagg
      181 cctatgcctc agccaagcac ggccaggtcg gcctggtgaa gcagctcgcc caggagctgg
      241 gcccgttcgg catcaccgtc aattccgtgg cgccgggctt catggcgacc agccccgact
      301 acgagcggca atggaattcc tacagcgagg aattccgccg cagcttcgcc gaccgtatcg
      361 ccatgcggcg catgggccgg cccgaagaca tcgccgatgc ggtactattc ctcgcgtccg
      421 accgcgcgtc gtggatcacc ggccagatct tgccggtgac cggctcgccg ctcgcttgat
      481 tcaaaaggag gtcgtcatgc ccgatacaca cgccccgcaa ctggaaccct ggcagtggag
      541 cgaggatcat tggcgcaagc tggtggctca agtgcgcgcc ggccggtcct atcggccgaa
      601 ggcctggaag gacggcgcgc gctgcgccgt agcgctttcc ttcgactccg accacgagac
      661 caacgagctg cgcgacggcg gcaagtcgat cgggcgaatg tgctggggcc agtacggcac
      721 ccgggtcggc gttccgcgca ttcgcgcgct gctggccagg cacggcgtca aggcgacgtt
      781 ctacgtgccc gccgtctcag ccctgctcca tcccgaggag cagcgcgcgc tggtggccga
      841 tggccacgag atcggcatcc atggctggat ccacgagctc aactcggtgc tgccctacga
      901 ggccgagcgc gacctgatgc tgcgctcggc cgacacgctg gagaagatca ccggcaagcg
      961 cgccgtcggc ctgcgcacgc catcgtggga tttcagcccc aacacgctcg ccatcgagaa
     1021 ggagatgggg ctgttctacg attcctcgct gatggccgac gaggattgct acgagctgct
     1081 gctgcacggc gagccgaccg gcgtggtcga gctgccggtc gaatgggtgc gcgacgatgc
     1141 ggtgtatttt tccatgcacc gcttctcctc gctgcggccc tacacgccgc cgaccgatgt
     1201 gctggaaact tttaggcgcg agctggatgc ggcgtgggag gaaagcggca tcttccagct
     1261 caccatgcat ccgcacatca tcggctaccg ctcgcgcatc tggatcgtcg acgagctgat
     1321 ccgccacgcc aagtccaagg gccaagggaa agatgcagtg tggttcgcca ctcacgagga
     1381 agtggcacgc tacgccaagg agcacgcggc gtgagcaaga ccgccatcgt caccggcggc
     1441 gcccgaggca tcggccgcgg ctgcgcgctc gagctggcgg cgcgaggcta tgatatcgcc
     1501 ctggtcgacc tgctcgaacc ggagatgaag cgcaccgcgg gcgagatcga agcgctcggc
     1561 cgcaagacgc tcgcctataa ggccgacgtc gcctccttcg cccgcgcgca tgaggtcgtg
     1621 gccgatgtcg cgcggcagtg gagcgcggtc gatttcctgc tcaacgatgc cggcggaccc
     1681 aatcccaagg gcatcctgga gatcaaggaa gaggagttcg accgcaccat cgcggtcaac
     1741 ctgaaaagct gcttcaacta catccatgcc gcggcgccga tcatgctgaa gcaggaagcc
     1801 ggcgggcgca tcgtcagcat gtcgtcgctc aatgcgctgt cgggcggcgt gaccagcgcc
     1861 gtcagcaagc attcctatgc cgcggccaag gccggcatcc tgggcctcac ccgttcgctc
     1921 gccaaggagc tcgggcccaa gatcatgatc aacgcaatct gccccggcgt gatcgagacc
     1981 gagctcggca acagcctcac caagtcgcgc ggccctgagc tcaccaaggg catcatgctc
     2041 aatcggctgg gcaagccggc cgacgtcgcc cagctcgtcg ccttcctcgc cacctcggag
     2101 ccctgctaca tcaccggcca gcacttcgtg atcgacggct tccagtggtc gtgctgacct
     2161 agcgcctgat gtcgtcgctg cgcttgtcga cgatctcgta ttgcacgtcg atcaccttgc
     2221 ggtcggtccg cgccggcggt ccgggtggcg gcggcgcgaa caggctgtgg aaccaggtct
     2281 tggccttgat ggccaggatg gcgagcacaa tgatcgcggc gacgccggcg atgacggcaa
     2341 agcccagcac cgccagcacg acgaagccca ccagccccag gattgcctgc agccacaccc
     2401 gcgccggcag gcgcgccagc atttccagga attgcttgcc gttcatgatg tccagcgttt
     2461 ctcgaactcc cacacgtcgg ggaatcccat cagctcgtgc atgcctgtga attgcggcac
     2521 gttcatgccc ttgctggtgc ctttgtcctt gagatgctcc caggcttggc gcatggcctc
     2581 tgcggcaacg ctgaagccca ggccgggata gatcgccagg tcgaagcccc attgcctgag
     2641 ccgcgccgct tcgacccgcg gcgtcttgcc gaattcgacc atgttggcga gcagaggctt
     2701 gctcacttcc cggccgatgc gctcgagctc ggcttcgctt tcgggcgatt cgacgaagat
     2761 gacgtcggcg ccggcttcct cgtagagctt ggcgcggcgc agcgcttcgt ccagcccatg
     2821 ggcggtgcgc gcgtcggtgc gcgccacgat catggtctcg ggatggcgcc gggcctcggc
     2881 ggcgaccttg atcttgagca ccatctcctc ggccggcacg acgcggcggc cgggcgtgtg
     2941 gccgcacttc ttgggcatct cctggtcctc gatctggatc gccgcgacgc ccgccgcctc
     3001 gtaaccgcgc accgtgcgct gcacgttcaa cagcccgccg tagccggtgt cggcatcggc
     3061 gatcagcggc gtctgcacga ccgagcagat catctcggcg c
//
LOCUS       DASWGA010000077         2249 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2285394, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000077 DASWGA010000000
VERSION     DASWGA010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2249
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2285394"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..1363)
                     /gene="trpB"
                     /locus_tag="VF991_01740"
     CDS             complement(137..1363)
                     /gene="trpB"
                     /locus_tag="VF991_01740"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEX9555185.1"
                     /translation="MPPSPSSSPNSFRTGPDERGHFGLFGGRYVAETLMPLILELEKA
                     YTEAKADPQFQGELNYLLAHYAGRPSPLYYAERLTRHLGGAKIYFKRDELNHTGSHKI
                     NNVLGQVLLAKRMGKTRVIAETGAGQHGVATATACALFDIPCVVFMGSVDVDRQAPNV
                     VRMKMLGAEVRPVKAGSATLKDAMNEALRDWVATCETTFYCIGTVAGPHPYPAMVRDF
                     QCVIGNEVRKQIMEMEGRLPDTLVACIGGGSNAMGLFHPFLDDKGVRIIGVEAGGKGV
                     ETGEHAASLTGGRPGVLHGNRTYLLQDKEGQITEAHSISAGLDYPGIGPEHSWLKEQG
                     RVEYVSATDNEALIAFQLLCKLEGIIPALEPAHALAHVTKLAPTLPKDNLLVMNLCGR
                     GDKDVFAVAERLGMKI"
     gene            complement(1421..1972)
                     /locus_tag="VF991_01745"
     CDS             complement(1421..1972)
                     /locus_tag="VF991_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007008530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX9555186.1"
                     /translation="MKTEQRLKELGIELTKPTSPMANYVNAVRTGNLLYLAGKGPGLP
                     GHPLPVGKVGRDFTREQGYEYARQTGLSLIAVMKAELGDLDRVKRIVKLLGMVNATPE
                     FGEQPEVINGCSDLFVTVFGDRGRHARSAVGMGSLPRGIPVEIEVIVEIEDGPARRLA
                     AKTAAKRKAAPKTKKKSAKSKRR"
     gene            complement(1986..>2249)
                     /locus_tag="VF991_01750"
     CDS             complement(1986..>2249)
                     /locus_tag="VF991_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEX9555187.1"
                     /translation="VADRLMFDAADGILPGGNARAFDWTILSGRTVPLPWLLAGGLTP
                     DNVAEAVRVTGARAVDVSSGVESSRGVKSIDLIRAFLDRVKAL"
BASE COUNT          348 a          733 c          769 g          399 t
ORIGIN      
        1 cgccggcggc gggcaggcct ttgaggatct ggtagccgat ctcggcgttg ggatcgccgg
       61 cgctgacata ggtcacgaga ccggcccgct tgtcggcctt gagttgggcg aagcgctggg
      121 cgatgcggct catcgatcag atcttcatgc ccagccgctc ggcgacggcg aacacgtcct
      181 tgtcgccgcg gccgcagaga ttcatcacca gaagattgtc ctttggcagg gtgggcgcga
      241 gcttggtgac atgggccagc gcgtgcgcgg gctcgagggc gggaatgatg ccttcgagct
      301 tgcacagaag ctggaacgcg atgagcgcct cgttgtcggt ggctgacacg tattccaccc
      361 ttccctgctc cttcagccag gaatgctcgg gcccgatgcc gggatagtcg aggccggcgg
      421 agatcgagtg cgcctcggtg atctggcctt ccttgtcctg caggagatag gtccggttac
      481 cgtgcagcac gcccggcctg ccgccggtca gcgacgcggc atgctcgccg gtctccacgc
      541 ccttgccgcc ggcctcgacg ccgatgatgc gcacgccctt gtcgtcgagg aagggatgga
      601 acaggcccat ggcgttcgag ccgccgccga tgcaggcgac cagcgtgtcg ggcagccggc
      661 cctccatctc catgatctgc ttgcgcacct cgttgccgat gacgcactgg aagtcgcgca
      721 ccatcgccgg atagggatgc gggccggcta ccgtgccgat gcagtaaaag gtcgtctcgc
      781 aggtcgccac ccagtcgcgc agcgcctcgt tcatggcgtc cttcagcgtg gccgagccgg
      841 ccttcaccgg gcgcacctcg gcgcccagca tcttcatgcg cacgacgttg ggcgcctggc
      901 ggtcgacgtc gaccgagccc atgaacacca cgcagggaat gtcgaacagc gcgcaggccg
      961 tcgccgtggc gacgccatgc tggccggcgc cggtctcggc gatcacccgc gtcttgccca
     1021 tgcgcttagc cagcaggacc tggcccagca cgttgttgat cttgtggctg ccggtgtggt
     1081 tcagctcatc gcgtttgaaa tagatcttgg cgccgcccaa gtgcctggtc agccgttcgg
     1141 cgtagtagag cgggctcggc cggccggcat agtgcgccag gagatagttc agctcgccct
     1201 ggaactgcgg atcggccttg gcctcggtgt aagccttctc cagctcgagg atgagcggca
     1261 tcagggtctc ggcgacgtag cggccgccga aaaggccgaa atgcccgcgc tcgtcggggc
     1321 cggtgcggaa gctgttgggt gaactgctcg ggctcggagg catcgctggt tcctgtcggg
     1381 acgcgggctt agcagtcccg acaggggtcg gtcaaaagcc ctagcgccgc ttgctcttgg
     1441 ccgatttctt cttggtcttg ggggccgcct tgcgcttggc ggcggttttc gcggccaacc
     1501 ggcgagccgg cccatcctcg atctcgacga tgacctcgat ctcgaccgga atgccgcgcg
     1561 gcagcgagcc catgccgacc gccgagcgcg cgtgccggcc gcgatcaccg aacaccgtga
     1621 cgaagagatc ggagcagccg ttgatgactt cgggttgctc gccgaattcc ggcgtggcgt
     1681 tgaccatgcc caaaagcttg acgatgcgct tcacgcggtc gaggtcgccc agctcggcct
     1741 tcatgacggc gatcaggctg aggccggtct ggcgggcata ttcgtagccc tgttcgcggg
     1801 tgaaatcgcg accgaccttg ccgaccggca gcggatggcc cggcaggccg ggccctttgc
     1861 cggcgagata gagcaggttg ccggtgcgca cggcattgac gtagttggcc atcggcgagg
     1921 tcggcttggt gagctcgatg ccaagctcct tcagccgctg ttcggtcttc atgcgcaggc
     1981 tcccctcaga gcgccttcac ccgatcgagg aaggcgcgga tcaagtcgat cgatttcaca
     2041 ccccggctcg attcgacgcc agaggaaacg tcgacggcgc gtgcgccggt gaccctcacg
     2101 gcttcagcga cattgtcggg cgtgaggcca ccggcgagaa gccacggcag cggcacggtg
     2161 cgacccgaca ggatcgtcca gtcgaaggcc cgcgcattgc cgccgggcaa gatgccgtcg
     2221 gccgcatcga acatcagccg gtcggcgac
//
LOCUS       DASWGA010000078         2786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_390018, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000078 DASWGA010000000
VERSION     DASWGA010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390018"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="VF991_01755"
     CDS             <1..263
                     /locus_tag="VF991_01755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019859373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEX9555188.1"
                     /translation="RHISLLAISVSHLAKHAVLQLELSLGLKHEERRPGTRRGLARHA
                     ADRAVDRIRDRFGWAAIGYGLVALGVVRSVPDAFRELAEKEL"
     gene            336..746
                     /locus_tag="VF991_01760"
     CDS             336..746
                     /locus_tag="VF991_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEX9555189.1"
                     /translation="MRVAITHSRLSRRRALQLTTGGAVVATSLPASAHHGWSWAEEAQ
                     TELKGTVKSVSMAPPHPSLQVAAGDGVLWQIDLANPNQTERSGFTATSAKPGDAIVVL
                     GNRHQDKTKMMMKAVRITVAGKTYDLYPERIKTN"
     gene            761..1231
                     /locus_tag="VF991_01765"
     CDS             761..1231
                     /locus_tag="VF991_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007818878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6644 family protein"
                     /protein_id="HEX9555190.1"
                     /translation="MQLVEWIGTWPGAMLLHRSGTAYLLVNAAHIAGVGLLIGGILPL
                     DVRLAGLFRGVPLAAIAPLLSRSAAIGVVLAMATGLWLFTVKPVEYLANEAFLWKIAL
                     LALALANVVLQHRSRHYRLALAGGDLHPGVRLTACCSAILWLAVLVAGRWIGFL"
     gene            1529..2419
                     /locus_tag="VF991_01770"
     CDS             1529..2419
                     /locus_tag="VF991_01770"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEX9555191.1"
                     /translation="MPRPSWKGYLKLSLVSCAVTLYNASSSSERVSFNTLNRKTGNRL
                     KQNLVDSVSGEPVDTADRVKGYQVAKGQYVMVEDTDLEALKIESTKTIEIETFVPAAE
                     IDEIYLDSPYYLAPDGKMAEEAFAVIREAMTRKKMAGIGRVVLSRRERLLMLQPRGPG
                     MLATTLRYPYEVRQDAEYFEGIGERKVAPAMLDIAQEIIGRMSGHFEPETFADRYEEA
                     VVAMLSAKQAGHTFAVPEAAEPGNVVDIMEALKRSLQASSGDGAVRRPRALSKKPTEK
                     EAAAPAAAAAKKPKARKAAR"
     gene            2435..>2786
                     /locus_tag="VF991_01775"
     CDS             2435..>2786
                     /locus_tag="VF991_01775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555192.1"
                     /translation="MPLAGQTLFLVGRLQGLTRRRLDQLVRARGGKISTRPGNRVTTV
                     AFGHSAASHALDDGRVQLPAGLPATASLISENVLRRELGLIEPPSAVDRSLGRPEIER
                     LAGLTPNLLSCLVLF"
BASE COUNT          463 a          933 c          916 g          474 t
ORIGIN      
        1 agaggcacat ctcgttgctg gcgatctccg tgtcgcatct ggccaagcac gcggtgctgc
       61 aactggaact ctcgctcggg ctaaaacacg aggagcgccg tcccggtaca aggagaggcc
      121 tggcgcgtca cgctgctgat cgcgccgtcg acaggattcg cgatcgcttc ggctgggcgg
      181 cgatcggcta cggcttggtg gcgctgggcg tcgtccgttc ggttcccgac gcatttcgtg
      241 agctcgccga gaaggagctg tgactgcctc gacaatgcct tacgacatga cgatcattgc
      301 gaagcggggt ctttgcttgc gtcatggagg ataagatgcg cgttgcgata acccacagcc
      361 gattgagccg ccgtcgcgcc ctccagctca cgacgggcgg cgccgttgtg gcaacgagcc
      421 tgccggcgtc ggcccatcat ggctggtcgt gggccgaaga ggcacagacc gagctcaagg
      481 gcaccgtcaa atcggtctcg atggcgccgc cgcatccgtc gctgcaggtg gctgccggcg
      541 acggcgtgct gtggcagatc gacctcgcca atcccaacca gacggagcgg tcgggattca
      601 cggcaacgtc ggccaagcct ggtgacgcga tcgtcgtgct gggcaaccgc caccaggaca
      661 agaccaagat gatgatgaag gcggtgcgca tcacggtcgc cggcaagacc tacgacctct
      721 atcccgagcg catcaaaacg aactgagcga cggcgcgtcg atgcagctcg tcgaatggat
      781 cggcacctgg ccgggtgcca tgctgctgca tcgctcgggc acggcctatc tgttggtgaa
      841 tgccgcgcat atcgcgggcg tcggcctgct catcggcggc atcctgccgc tcgatgtgcg
      901 cctggccggg ttgtttcgcg gcgtcccgct tgccgcgatc gctccgctcc tgtcgcgcag
      961 cgcggccatc ggcgtcgtcc tggcgatggc gacgggcctg tggctgttca ccgtgaagcc
     1021 cgtcgagtat ctcgccaacg aggccttcct gtggaagatc gcgctgcttg cattggcgct
     1081 cgccaatgtc gtactgcagc atcgaagccg tcattatcgc ctcgccctgg ccggaggcga
     1141 ccttcacccc ggcgtccgct tgaccgcctg ttgctcggca atcctctggc tcgcggtgct
     1201 ggtcgccggt cgatggatcg gatttctcta ataagagcgc cactggagtg gcgcgctccc
     1261 agcgcatgat tctatggtcg cccccgacag cagaagcgcc ttctagtcgt tgtcgggtga
     1321 gactgatcac ggtggcagcc gggtcacggc gcgcgtgtct tccgcgatga ctcctgcgtt
     1381 gtccatttgt tcgaccggtg ccgccgccgc catgcgtgcc cccgaagcgc atcctgtacg
     1441 ttgcgccgca atcggacata cccgtagtgt cgacctgcag cagcgcttga attaaaatag
     1501 ctaccacctt gtatccagga gtctttcgat gccccgcccc tcgtggaaag gctatctcaa
     1561 gctgtcgctc gtctcctgcg cggtgacgct ctacaacgcg tcctcgtcgt cggagcgcgt
     1621 ttcgttcaac acgctgaatc gcaagaccgg caatcggctc aagcagaacc tggtcgattc
     1681 ggtgagcggc gagccggtcg acacggccga ccgcgtcaag ggctaccagg ttgccaaggg
     1741 ccagtacgtc atggtcgagg ataccgacct cgaggcgctc aagatcgaga gcaccaagac
     1801 catcgagatc gagaccttcg tgccggccgc cgagatcgac gagatctacc tcgacagccc
     1861 ctactacctc gcgcccgacg gcaagatggc cgaggaggcg ttcgccgtga tccgcgaggc
     1921 catgaccagg aagaagatgg ccggcatcgg ccgcgtcgtg ctgagccggc gcgagcgcct
     1981 gctgatgctg cagccgcgtg ggcccggcat gctggcgacg acgctgcgct atccctacga
     2041 ggtgcggcag gacgccgaat acttcgaagg catcggcgag cggaaggtgg cgccggcgat
     2101 gctcgacatc gcccaggaga tcatcggccg catgtccggg cacttcgagc ccgagacgtt
     2161 cgccgaccgc tacgaggaag ccgtcgtcgc catgctgagc gccaagcagg cgggccacac
     2221 cttcgcagta cccgaggcgg ccgaacccgg caacgtcgtt gacatcatgg aggcgctgaa
     2281 gcgcagcctc caagcgtcga gcggggatgg cgccgtccgc cggccgcgcg cgctgagcaa
     2341 gaagcccacc gagaaagaag cggcggcgcc cgccgcggct gcggctaaga agccgaaagc
     2401 gcgcaaggcc gcgcgctgag ggcgggaggc aggcttgcct ctcgccggac agaccctctt
     2461 cctcgtcggc cgcctgcagg gcctgacgcg ccggcgcctc gaccagctcg tgcgcgcccg
     2521 cggcggcaag atttctacgc ggccgggcaa tcgcgtgacg acggtcgcct tcggccattc
     2581 ggccgcttcc cacgcgctcg acgacggccg cgtccagctt ccggccggct tgccggcgac
     2641 ggcgtcgctg atcagcgaga acgtgctgcg ccgagagctc ggcctgatcg agccgccatc
     2701 tgcggtcgac cgcagcctgg gacggccgga gatcgaacga ctcgccggcc tcacgcccaa
     2761 cctgctgtcc tgcctggtgc tgttcg
//
LOCUS       DASWGA010000079         3905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2285811, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000079 DASWGA010000000
VERSION     DASWGA010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3905
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2285811"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1037)
                     /locus_tag="VF991_01780"
     CDS             complement(<1..1037)
                     /locus_tag="VF991_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9555193.1"
                     /translation="MPAFSYDVIVVGGGHAGCEAVAAAARLGARTLLLTHRVDTIGEM
                     SCNPAIGGLGKGHLVREIDALDGVMGLAIDRAGIQFRTLNLSKGPAVRGPRAQADRKL
                     YRQAMQALLADQANLEIRGDAVADILLDASGACAGVVTERGREIAAGRVVLTTGTFLR
                     GLIHLGETTIPAGRARGQRDGMPADLAADAVEEPSSALAQTLHRLGFTLGRLKTGTPA
                     RLDGRTIDYAGLERQEGDDPPAPFSYLTAKISTPQVACHITTTTAATHELIRANLHRA
                     PIYSGQIESVGPRYCPSIEDKVVRFGHRDRHQIFLEPEGLDDPTVYPNGISTSLPREV
                     QVAMLQTIPGL"
     gene            complement(1061..1675)
                     /locus_tag="VF991_01785"
     CDS             complement(1061..1675)
                     /locus_tag="VF991_01785"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX9555194.1"
                     /translation="MTKILLTRHGHVEGIHPERFRGHAELALTPQGVAEAKALAARIA
                     ATWKPVTVYTSALQRCVVTGTMIAKACGCTATPLKGLMDIDYGAWQMRTHEEIKAEAP
                     QAYRLWKTAPQRVRFPEGESLQDLVARTADVLRLVLERHAADTVVMVGHDSVNRAILL
                     QLLDQPMSAYWRWAQSPCTLNEIDLEGIEVRIERINDTSHLDRA"
     gene            1780..2592
                     /locus_tag="VF991_01790"
     CDS             1780..2592
                     /locus_tag="VF991_01790"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX9555195.1"
                     /translation="MLRPLLTMAIVAAVGITTAQAQNPPARDPANPSIAMQTTAPGGA
                     DARKLIGRNIKNAQNETIGEIKSVHLDPNGKVDGVLVGVGGFLGMGEREVLLGWRDLQ
                     IDANGEIVRVNMTKDQLKAMAPYSYKDAAYRGTVFTDKGVYVPDRANSDRTNTASVPT
                     RSTGDFNVAGQMSTGALIGKTVKNATNESVGKIDDIYLDASGAVKLVVVSVGGFLGVG
                     SKDVAVPWTDLKFGRDGSSITVLTNWTKDSLKAMPDYKDERRIPSGTVRSGG"
     gene            2755..3312
                     /locus_tag="VF991_01795"
     CDS             2755..3312
                     /locus_tag="VF991_01795"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEX9555196.1"
                     /translation="MPTKQKPDAIAVLKEDHRKVEKLFESFEKAHDGERKQQLVKEIC
                     TELCIHATIEEEIFYPACKGRIEDEDLLEESYVEHDGAKVLIAELLDSAPDAEFYDAK
                     VSVLSEMIKHHVKEEEKRSEGLFAQAKQAGVDLEDLGQRLMERKQALKEEFADGANLP
                     PPHTRSFTGHELVQDHPVNAGGATA"
     gene            complement(3587..>3905)
                     /locus_tag="VF991_01800"
     CDS             complement(3587..>3905)
                     /locus_tag="VF991_01800"
                     /inference="COORDINATES: protein motif:HMM:NF039409.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6328 family protein"
                     /protein_id="HEX9555197.1"
                     /translation="SPTEQLLHLVAFLLLALAMGLIMAPAAYHRQAERGKVTRRFVDL
                     ASMLLTAAMLPLIVGVCLDAYLIARLILGERTTPAIIAGIVAIVLAGLWYGLPAFCRR
                     LKD"
BASE COUNT          723 a         1278 c         1298 g          606 t
ORIGIN      
        1 tccagacctg gaatagtctg caacatcgcg acctgcactt cgcgaggcag ggaggtcgaa
       61 atcccattgg gatagaccgt gggatcgtcg agtccttcgg gctccaggaa gatctgatgc
      121 cggtcacggt ggccgaagcg gaccaccttg tcctcgatcg acggacagta gcgcgggcca
      181 acgctttcga tctggccgga atagatcggc gcgcgatgca ggttggcgcg gatcaactca
      241 tgcgtagcgg cagtcgtggt ggtgatgtgg caggcgacct gcggcgtcga gatcttcgcg
      301 gtcaggtacg aaaacggcgc gggcggatcg tcgccctctt ggcgctcgag cccggcataa
      361 tcgatcgtgc gcccatcgag ccgcgccggc gtgccggttt tcagccggcc cagggtaaag
      421 cccaggcgat gcaacgtctg ggcgagcgcg gaggaaggtt cctcaaccgc gtcggcggcg
      481 aggtcggccg gcatgccatc gcgttggccg cgcgcccgac cggctggaat cgttgtctcg
      541 ccgagatgaa tcaggccgcg caaaaacgtg cccgtggtca gcacgacccg gccggcagcg
      601 atttcccggc cgcgttcggt caccaccccg gcacacgcgc cgcttgcatc gagcaagatg
      661 tccgcaaccg cgtcgccgcg gatctcgaga ttggcctggt cagccagcag ggcttgcatg
      721 gcctggcggt agagcttgcg gtcggcctgg gcgcgcggcc cccggaccgc cgggcccttg
      781 gacaggttga gggtgcggaa ctggatgccg gcgcggtcga tcgccaggcc catcacgcca
      841 tccagggcgt cgatctcgcg caccagatgg cctttgccca gcccgccgat ggcgggattg
      901 caggacatct cgccgatcgt gtcgacccga tgggtcaaca gcagggtgcg cgcgcccagc
      961 cgcgccgccg cggccacagc ttcgcagccg gcatggccgc cgcccaccac gatcacgtca
     1021 tatgagaagg ccggcatggc cggcctttta cgctccccga tcaggctcgg tccagatgac
     1081 tcgtgtcgtt gatccgctcg atccgcacct cgatgccctc gaggtcgatc tcgttcaagg
     1141 tgcaggggct ttgcgcccag cgccagtagg ccgacattgg ctggtcgagc agctgcagca
     1201 ggatggcgcg gttgacgctg tcatggccga ccatgaccac ggtgtcggcg gcatggcgct
     1261 cgagcaccag gcgcagcaca tcggccgtcc gcgccaccag gtcctgcaac gattcgccct
     1321 ccggaaagcg cacacgctgc ggcgccgttt tccacagacg ataggcctgt ggcgcttcgg
     1381 ccttgatctc ctcatgcgtg cgcatctgcc aggcgccgta atcgatatcc atcagcccct
     1441 tgagcggtgt cgcggtgcag ccgcaggcct tggcgatcat ggtccccgtc acgacgcagc
     1501 gctggagcgc gctcgtatag accgtgacgg gcttccaggt cgcggcgatg cgcgccgcca
     1561 gcgccttggc ctcggccacg ccttgcggcg tcagggcgag ctcggcgtgg ccgcgaaagc
     1621 gttcgggatg gatgccttcg acatggccat ggcgggtcag caggatcttg gtcatcccgc
     1681 catcctagca gggcactgca gtttgccggc aacgaaagcc gggcgcagcc gttagcgagc
     1741 cacgacccat tccgcggcca caacgaaagg agcagatcga tgttgaggcc actcctgact
     1801 atggcgatcg tcgctgccgt cggcatcacc accgcccagg cgcagaaccc gcccgcccgt
     1861 gatcccgcga acccctcgat tgccatgcag acgacggcgc ccggcggcgc cgacgcgcgc
     1921 aagttgatcg ggcgcaacat caagaacgcg cagaacgaga cgatcggcga aatcaagtcg
     1981 gtccatctcg atcccaacgg caaggtcgac ggggtcctgg tgggcgtcgg cggctttctg
     2041 ggtatgggcg agcgcgaggt attgctcggc tggcgcgacc tgcagatcga cgccaacggc
     2101 gagatcgttc gcgtcaacat gaccaaggac cagctcaagg ccatggcgcc gtacagctac
     2161 aaggacgcgg cctaccgcgg cacggtcttc accgacaagg gcgtgtacgt gcccgaccgc
     2221 gccaatagcg atcgcaccaa caccgcatcc gtgccgacgc gttcgaccgg cgacttcaac
     2281 gtcgcgggcc agatgtcgac cggcgcgctg atcggcaaga cggtgaagaa cgccaccaac
     2341 gagagcgtcg gcaagatcga cgacatctat ctcgatgcct ccggcgcggt gaagctggtg
     2401 gtggtctcgg tcggcggctt cctgggcgtc ggcagcaagg acgtcgccgt gccgtggacc
     2461 gacctgaagt tcggccgcga cggcagctcg atcaccgttc tcaccaactg gaccaaggac
     2521 tcgctgaaag cgatgcccga ctacaaggac gagcgccgca tcccgtccgg caccgtgcgg
     2581 tcgggcggct gacttttccg tccaagaccg aaccaagcgg cgccttcgca agaaggcgcc
     2641 gttcttcttg gagcctgcag aaagtcggtt cggtttcatc tcccgattgc ccggaactga
     2701 cgctgtcatg cggcgtttgc ccgtcatcgc caaccgccgc caaggagccc cgccatgccg
     2761 accaagcaga agcccgatgc gatcgccgtc ctcaaggaag accatcgcaa ggtcgagaag
     2821 ctgttcgaga gtttcgagaa ggcgcacgat ggcgaacgca agcagcagtt ggtgaaggaa
     2881 atctgcaccg agctctgcat ccacgcgacc atcgaggagg aaatcttcta tccggcctgc
     2941 aagggcagga tcgaggacga ggatctgctc gaggagtcct atgtcgagca tgatggcgcc
     3001 aaggtgctga tcgccgagct gctcgacagc gcgcccgacg cagagttcta cgatgccaag
     3061 gtcagcgtcc tgtcggagat gatcaagcac cacgtcaagg aagaggaaaa gcgctcggaa
     3121 ggcctgttcg cccaggccaa gcaggccggc gttgatctcg aggatctggg ccagcgcctg
     3181 atggaacgca agcaagccct caaggaagag ttcgccgacg gcgccaacct gccgccgccg
     3241 cacacccgca gcttcaccgg ccacgagctg gtgcaagacc atccggtgaa tgccggcggc
     3301 gcgacggcgt agagcatttc gaaatcatcg aggtcctctc cgccgcgtcg gcgccttcac
     3361 aggcgcctga gggggagagg aagggaccca ttgcggagca atggggaggt gaggtggcgt
     3421 ccgataagca cgagattctt ccggcgcgag cgccataccc acctcaccct cccgcgctgc
     3481 gcgcgggccc ctccctctcc ccccgctaag cgggcggaga gggcgtctga gtcgagatgt
     3541 tgggaattgc gctaatcgtg acgaggccga tgtccgctct aaaaaatcag tccttcagcc
     3601 ggcggcagaa ggcgggcagg ccgtaccaca gcccggccag gacgatggcg acgatgccgg
     3661 cgatgatcgc cggcgtcgtc cgttcgccca ggatcaggcg ggcgatgaga taggcgtcga
     3721 ggcagacgcc gacgatcagg ggaagcatcg ccgcggtcag cagcatcgac gccagatcga
     3781 cgaagcggcg cgtgaccttg ccgcgctcgg cctgtcgatg ataggccgcc ggcgccatga
     3841 tcaggcccat ggccagcgcc agcagcagga aggccaccag gtgcaggagc tgttcggtcg
     3901 gcgag
//
LOCUS       DASWGA010000080         8083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_638292, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000080 DASWGA010000000
VERSION     DASWGA010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8083
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_638292"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..3231)
                     /locus_tag="VF991_01805"
                     /pseudo
     CDS             complement(1..3231)
                     /locus_tag="VF991_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085385.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
     gene            complement(3265..3468)
                     /locus_tag="VF991_01810"
                     /pseudo
     CDS             complement(3265..3468)
                     /locus_tag="VF991_01810"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
     gene            complement(3674..4399)
                     /locus_tag="VF991_01815"
     CDS             complement(3674..4399)
                     /locus_tag="VF991_01815"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9555198.1"
                     /translation="MSDQARAELAPTGVLRAGINLSNFLLVTGRSANAEPVGVAPDMA
                     REIAASLGMPVTYVPFKTPGELADQAGKNVWDIGLIGAEPQRAATIAFTAAYVEIEAT
                     YMVPPGSPIKSIAEVDKKGVRVAVSARSAYGLWLENNLKNATLVQVSGLDAAFNKFID
                     DKLDVLAGLRPGLLKDVDKAPGLKILDGKFTAVQQAVGTAKPNLAGAAYLADFVEKAK
                     KSGLVGRLIERHNVKGLSVAPPA"
     gene            4424..5527
                     /locus_tag="VF991_01820"
     CDS             4424..5527
                     /locus_tag="VF991_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX9555199.1"
                     /translation="MKITDVTLTLFAWDDIPPTQYGQHSKFAGSSALGLLRIATDDGV
                     EGNAFLGSASNGATTDGQGLISHLKPVLMGRNANHREAIVADLWKRQRVAGVRAIGAV
                     DVALWDLLGKAIGQPIHRLLGTYREAVPAYASSAVLTSAAAYADEAAKFKEHGWAAYK
                     IHPPTRWREDIKVCEAVRRAVGDYTIMLDSTWSYDYPTAVRVGRAAEEMGFHWYEDPL
                     ADQDIYNYVKLKQQLSIPILATEYPITGLDAYQPWIMLQATDFLRGDVAVKGGITTLV
                     KGAHLAESFRMNYEVHHGGNSLNNVANLHVIASLRNTEFFEVLLPDAAQKYGLEQDIV
                     VGRDGLVHVPNGPGLGAAIDFKLIERKKIAVLT"
     gene            5607..5939
                     /locus_tag="VF991_01825"
     CDS             5607..5939
                     /locus_tag="VF991_01825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555200.1"
                     /translation="MQRTLLALALIVTAGASYAQTMPGNEPRDPYGRPLVGRNDWVRQ
                     PGDQPGPGNAGGNPNMAVAPMPSAPMMVRQQDGPHQVAFKDEYGFRYDSEGNRLNARG
                     YVISPHTR"
     gene            6039..6503
                     /locus_tag="VF991_01830"
     CDS             6039..6503
                     /locus_tag="VF991_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HEX9555201.1"
                     /translation="MNPATAIYIDADACPVKAEIYRVAERYGLKVYVVSNSYLGVPRD
                     PRVELVVVSDGFDAADDWIAERAGPGDIVVTGDIPLADRSLKAGAAVIGNSGVPFTTS
                     SIGMAMASRELMSTLRAMGETTGGPKPMSQRDRSRFLSALDETVQKLRRQRG"
     gene            complement(6515..7375)
                     /locus_tag="VF991_01835"
     CDS             complement(6515..7375)
                     /locus_tag="VF991_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HEX9555202.1"
                     /translation="MRDLSAGPELLSLNTATVRKQADLLGIVEACARHGIAAVSPWRD
                     QVAAVGLERAARAIRDAGLKLSGYCRGGLFPASGEHVAAARDDNRRAVDEAAALEAPC
                     LILVAGGLPQFARPGSTPSKDLVGARKMIEDGIAELLAHARQARLPLAIEPLHPMYAA
                     DRAAVNTLAQALDIADRLDPGGGALGVAVDVYHLWWDPDLYTGIARAGRERVLAYHVS
                     DWLVPTKDMLNDRGMMGDGVIELRRIRCAVEDAGFNGFIEAEVFSDYWWAQPMDRVLS
                     TCIERYRSVV"
     gene            complement(7383..>8083)
                     /locus_tag="VF991_01840"
     CDS             complement(7383..>8083)
                     /locus_tag="VF991_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF993 family protein"
                     /protein_id="HEX9555203.1"
                     /translation="SRALVRAARSADDYARVYQRVLAQVRQPVIIHWLGDMFDPALAG
                     YWGTRDLDRAMDTAVAIINASAAKIDGVKISLLDKDREIAMRRRLDKSVKMYTGDDFN
                     YAELIAGDAHGYSHALLGIFDAIAPAAAASLAALAEGDLEKFHAILAPTVPLSRHIFR
                     APTQFYKTGVVFMAYLNGHQDHFTMVGGQESARSTLHLAELFRLADKAGLFRDPEVAA
                     QRMKAVLAVRGLAT"
BASE COUNT         1270 a         2604 c         2748 g         1461 t
ORIGIN      
        1 ggccaggccc tgctggcggt cctcgtccat gctcaggatc tgcaccggga tgtggcgcgt
       61 ctcgagcgtg cgcttgaact ggctgagcac gttccaaccc agcatgtcgg gcaggaagat
      121 gtcgagcgac atggccaccg gccggtattg cagtgcgagg tcgagggcgt ccgcgccgcg
      181 cgccgtcacg acggccttga gccccgcggt gtgcgcggcg tcgaccagga tgccggcata
      241 gttggggtcg tcctcgacga tcaggagcgc gcgttcgccg ggctggatgt tatggcgatc
      301 gtcgggaaac tggtcggcga gatgctccgg cagggtgacc tgcggcagtg gcagcgagcc
      361 cggctgcggc gcgcgcagcg ccgtgcgcgg gccggtgtac atcgtcggca ggaagagcgt
      421 gaaggtgctg ccgatgcccg gcgtgctgcg caaggtcagc tcgccgccca gcagcatggc
      481 gagttcgcgg ctgatggcga gaccgagacc cgtgccgcca tacttgcggc tggtgctggc
      541 gtcggcctgc tggaaggcct cgaacacgat cttctgcttc tcgcccggga tacccacgcc
      601 ggtatcggtg acctcgaagg cgaccaccga gcttgcctgg ttgagggcaa tgttgtcggg
      661 acgccagccg gtgagcgccg gcacgacgcg cagcctgacg ctgccgtggg cggtgaactt
      721 gagggcattg gacagcaggt tcttcaggat ctgctgcagg cgcttggagt cggtgacgat
      781 cgagcggccg agatcgccgt cgaccagcac ctcgaacgac aggccctgcg attcggcttg
      841 gtggcggaac ggccgcgcca ccgtttccag cacgttggag aagaagatct cttcggcgtc
      901 gaccgtcacc gtgccggact cgatcttgct caggtcgaga atgtcgctga tcaggttcaa
      961 caggtcggtg ccggcgccgt ggatggtgcg ggcgaactcg atctgcttgg gcttgaggtt
     1021 gccctcggga ttgtcggcaa gctgctggcc caggatcagg atcgagttca agggcgtgcg
     1081 cagctcgtgg ctcatattgg ccaggaactc cgacttgtag cgcgacgtca gcgccagctc
     1141 cgaggccttc tcttcgaccg cgcggcgggc ctgctcgatc tcctggttct tgcgctcgac
     1201 ctcgaagttg cgctcggcga gctgggcggc cttctgctcg agctgctcgt tggtctgctg
     1261 cagctcgccc tgctgggttt gcagctcgct ggcgagtttc tgcgactgct cgagcaggcc
     1321 ttcggtctgc atcgtggctt cgatcgagtt cagcacgatg ccgatcgagg cggtgagctg
     1381 ctcgaggaag gcgagctgca gttcggtgaa gtcgctgagc gaggccagct cgatcaccgc
     1441 cttgacctgg ccctcgaaca ggaccggcag cacgatgatg ctcttgggcg acgcctcgaa
     1501 cagccccgag ctgatcggat gcagcgtcgt cggcatgtcg gagatcagga cctggcgctt
     1561 gtcggcggcg cactggccga tcaggccctc gccgagccgg accgtctcgg gatgacccat
     1621 ccgggagtcg gcgtagatcg acagcaggcg tagcgcgacg tcgccctcgt tggcgttctc
     1681 ggtctgatag atcaccgcct gatgggcgcc aaccagcggc gtcagttcgc tcagcatcag
     1741 ccggccgacc gtgctgaggt cgcgctggcc ctgcagcatg ttggtgaacc gggcgaggtt
     1801 ggtcttcagc cagtcctgtt cggtgttgcg atccgtcgtc agtcggaggt tgtcgatcat
     1861 ggtgttgagc ttgtccttga gctcggacag ctcgcccagc gcgtcgacct ggatagagcg
     1921 cgtcaggtcg cccttggtca ccgcggtcgc cacctcggcg atggcgcgca cctgggcggt
     1981 gagattggtc gccatcgaat tgacgttgtc ggtgaggtcc ttccaggtgc cggcgacgcc
     2041 cggcacctgg gcctggccgc ccagcttgcc ttcggtgccg acctcgcggg ccacgcgcgt
     2101 cacctcgccg gcgaaaccgt tcagctgatc gaccatggtg ttgatggtct ccttcagctg
     2161 caggatctcg ccgcgcacgt cgacggtgat cttcttggag aggtcgccgc cggccacggc
     2221 ggtcgtcacc tcggcgatgt tgcggacctg ggcggtgagg ttggtcgcca tcgagttgac
     2281 gttgtcggtc aagtccttcc aggtgccggc gacgccgggc acctgcgcct ggccgcccag
     2341 cttgccttcg gtgccgactt cgcgcgccac gcgggtgact tcgccggcaa agccgttcag
     2401 ctggtccacc attgtgttga tggtttcttt cagctgcaaa atctcgccgc gcacgtcgac
     2461 ggtgatcttc ttcgacaagt cgccgcgcgc caccgcagtg gtcacctcgg cgatgttgcg
     2521 gacctggtcg gtgaggttgc cgcacatggc gttcaccgag tcggtgaggt ccttccaggt
     2581 gccggcgacg cccggcacga tcgcctggcc gcccagcttg ccctcggtgc cgacctcgcg
     2641 cgccacgcgc gtgacttccg aggcgaacga gcggagctgg tccaccatgg tgttgatggc
     2701 ttccttgagc tgcaggatct cgccgcgcac gtcgacggtg atcttgcgcg acaggtcgcc
     2761 gttggccacc gcgatggtga cgtcggagat gttgcgcacc tgggccgtca ggttattggc
     2821 catcgagttg acgctctcgg tcagctcgcg ccacacgccg gtgacctcgc tcaccttggc
     2881 ttggccgccc agcttgccgt cggtgccgac ctcgcgcgcc acgcgcgtca cctcggaggt
     2941 gaacacgctg agctgcttga tcatggtatt gacgatggtc gcggcgcgca aaaactcgcc
     3001 cttgagcggc cggccgtcga cgtcgagccg caccgtctgc aacaggtcgc cctgcgccac
     3061 cgcgccgatc acgcgcgtca cctcggtggt cggccacacc aggtcgtcga tcaggccgtt
     3121 caccgagcct tccatctcgc cccaggcggc ggtggagatg ctgaacttca ccctctggcg
     3181 cgtgcggccc tgctcaccga ccgacttgcc gatgcgctcg agctggtgcg ccatattctg
     3241 gttggcgccg acgatctcgt tgaacaggat ggcgatacgg cccagcgggc cgtcgcgtcc
     3301 ggccggcagg cggacggaaa agtcgccggc ccgcacggcc tccatggcct gctgcagctc
     3361 gtgaagatcg tggggaacag tgccgttgga gatttggccg cgacgggagg acaagggcgt
     3421 ggttcggccg tgcgccgcgc ctgcggcggt ctcgatgtcg gcggtcatgg tgcgctcacc
     3481 ctgcctgctg ttcagtcaac aatagcggcg gaggattcgc gaaccaatat ggcggatttc
     3541 cgtagctcgc cccggatgca ctgccccccg atggaccatc aacgccaaat gttgggaaaa
     3601 gttgcgtcat ttcggtgaca aaacccgaca atactacatc gagtgtgcaa ccttggcggt
     3661 cgacccaatt aggctatgcc ggcggcgcaa ccgacaggcc tttgacgttg tggcgctcga
     3721 tcaggcgccc aaccaggccg gatttcttgg ctttttcgac aaagtccgcg agataggccg
     3781 caccggcgag gttgggcttg gccgtgccga ccgcctgttg gacggcggtg aacttgccgt
     3841 cgaggatttt taggccgggc gccttgtcga cgtccttcag caggccggga cgcaggccgg
     3901 ccaggacgtc gagcttgtcg tcgatgaact tgttgaaggc ggcgtcgagg ccgctcacct
     3961 gcaccagggt ggcgttcttg aggttgttct ccagccagag accgtaggcc gaacgcgccg
     4021 agacggcgac gcgcacgccc ttcttgtcga cctcggcgat ggatttgatc ggcgagcccg
     4081 gcggcaccat gtaggtcgcc tcgatctcga cataggcggc ggtgaaggcg atcgtcgccg
     4141 cgcgctgcgg ctcggcgccg atcaggccga tgtcccacac attcttgccg gcttggtcgg
     4201 cgagttcgcc tggcgtcttg aacggcacgt aggtcacggg catgcccagg ctggccgcga
     4261 tctcgcgcgc catgtcgggc gccacgccga ccggctcggc gttcgcactg cggccggtga
     4321 ccagcaggaa gttggagagg ttgatgccgg cgcgcaggac accggtcggg gcgagttcgg
     4381 ctcgggcttg gtcggacatg gcggcagtct atactgggtc gccatgaaga tcaccgacgt
     4441 cacgctcact cttttcgcct gggacgacat cccgcccacc caatacggcc agcacagcaa
     4501 gttcgcgggc tcgagcgcgc tcgggctgct gcgcatcgcc accgacgacg gcgtcgaggg
     4561 caacgccttc ctgggctcgg cgtcgaacgg cgcgaccacc gacgggcagg ggttgatcag
     4621 ccatctgaag cccgtgctga tggggcggaa cgccaaccat cgcgaggcga tcgtggccga
     4681 cctctggaag cggcagcgcg tcgccggcgt gcgggcgatc ggcgcggtcg acgtggcgtt
     4741 gtgggacctt ctgggcaagg cgatcggcca gccgatccat cgcctgcttg gcacctatcg
     4801 cgaagcggtg ccggcctatg ccagctccgc ggtattgacg tcggccgccg cgtacgccga
     4861 cgaggcggcc aaattcaaag agcacggctg ggcggcctac aagatccatc cgccgacgcg
     4921 ctggcgcgag gacatcaagg tctgcgaggc ggtgcgccgt gctgttggcg attacaccat
     4981 catgctcgat tcgacctggt cttacgacta tccgacggcg gtgcgggtcg ggcgcgctgc
     5041 cgaggagatg ggtttccact ggtacgagga tccgctggcc gaccaggaca tctacaacta
     5101 cgtgaagctg aagcagcagc tctccatccc gattctcgcc accgaatatc ccatcaccgg
     5161 ccttgatgct taccagccct ggatcatgct gcaggccacc gacttcctgc gcggcgacgt
     5221 cgcggtgaaa ggcgggatta caacccttgt gaagggagcc catctcgccg agtcgtttcg
     5281 catgaactat gaagtgcacc acggcggcaa ttcgctgaac aatgtcgcca acctgcatgt
     5341 cattgcctcg ctcaggaaca ccgagttctt cgaggtcctg ctgcccgacg ccgcccaaaa
     5401 gtacggtttg gagcaggata tcgtggtcgg gcgcgacggg ctggtgcacg tgcccaacgg
     5461 tcccggcttg ggggcggcca tcgatttcaa gctgatcgag cgcaagaaga ttgccgtatt
     5521 gacctgaacg ggcgattcgc gcgcaaccgt gtccgacgct gcgacgttgg ttaggtaccg
     5581 cagccttttc ccaaggagga tttcccatgc aacgcacgtt gcttgcgctc gctttgatcg
     5641 tgaccgccgg cgcttcctat gcccagacca tgccgggcaa tgagccgcgt gacccctacg
     5701 gtcggccctt ggtcggtcgc aacgattggg tgcgtcagcc tggcgatcag cccggccccg
     5761 gcaacgccgg cggcaacccc aacatggcgg tggctcccat gccgtctgcc ccgatgatgg
     5821 tgcgccagca agacggcccg catcaggtcg ccttcaagga cgagtatggc ttccgctatg
     5881 acagcgaagg caaccgtctg aatgcgcgcg gctacgttat ctcaccgcac acccggtaag
     5941 ttcgcgcgtt tgagcgaaag gccggcggtc cgacacgggc cgccggtttt ctttttcggc
     6001 ttcttgttct cggtggtgtc cggtggtgat cttgccggat gaacccggcg accgcgatct
     6061 acatcgatgc cgacgcctgc ccggtgaaag ccgaaatcta tcgggtcgcc gaacgttacg
     6121 gcctcaaggt ctatgtcgtg agcaattcct acctcggcgt gccgcgcgac ccgcgcgtcg
     6181 aactggtggt cgtgagcgat ggcttcgacg ccgccgacga ctggatcgcc gagcgtgccg
     6241 gaccaggcga catcgtcgtc accggcgata tcccgctcgc cgatcgcagt ttgaaggccg
     6301 gcgcggcggt gatcggcaat agcggcgtgc cgttcaccac atcctcgatc ggcatggcga
     6361 tggccagccg cgaattgatg tcgaccttgc gggccatggg cgagacgacc ggcggcccca
     6421 agccgatgag ccagcgcgac cgctcgcgct tcctatcggc gctcgacgag accgtccaaa
     6481 agctgcgccg gcagcgtggc tgaatgccgg ccgatcacac cacgctgcgg taccgttcga
     6541 tgcaggtgct gagcacccgg tccatgggct gggcccacca gtaatcggag aagacctcgg
     6601 cttcgataaa gccgttgaag ccagcgtcct cgacggcgca gcggatgcgc cgcagctcga
     6661 tcacgccatc gcccatcatg ccgcggtcgt tcagcatgtc cttggtcggc accagccagt
     6721 cgctgacatg gtaggcgagc acccgctcgc ggccagcccg cgcgatcccg gtatagaggt
     6781 cgggatccca ccacaggtga tagacgtcga cggccacgcc gagcgcgccg ccaccggggt
     6841 cgagccggtc ggcgatgtcg agcgcctggg ccagtgtgtt cacggcggcg cggtcggcgg
     6901 cgtacatggg atgcagtggc tcgatggcca gcggcagccg ggcctggcgc gcatgggcta
     6961 aaagttcggc gatgccgtcc tcgatcattt tgcgcgcgcc aacgagatcc ttggaaggcg
     7021 tcgagcccgg tcgtgcgaat tgcggcaagc cgcccgccac caggatgagg cagggcgctt
     7081 ccaatgccgc ggcctcgtcg acggcgcggc ggttgtcgtc gcgcgccgcg gcgacgtgct
     7141 cccctgaggc gggaaacagg ccgccacgac agtagcccga gagctttagg ccggcgtccc
     7201 tgatggcccg cgcggcccgt tccagcccga ccgcagcaac ctggtcgcgc catggactga
     7261 cggccgcaat gccgtggcgc gcgcaggctt cgacgatgcc taaaaggtcg gcctgcttgc
     7321 gcaccgtggc cgtgttgagc gacagcagct caggccctgc gctcaggtcg cgcatcgcga
     7381 gctcacgtcg ccaggccgcg caccgccagc accgccttca tgcgctgggc cgcgacttcg
     7441 gggtcgcgga acaggccggc cttgtcggcc aggcggaaca gctcggccag atgcagggtc
     7501 gagcgcgcgc tctcctggcc gccgaccatg gtgaaatggt cctgatggcc gttgagatag
     7561 gccatgaaga ccacgccggt tttgtagaac tgcgtcggcg cgcggaagat gtgacgcgac
     7621 aacggcacgg tcggtgccag gatggcgtgg aacttttcaa ggtcgccctc ggccagggcc
     7681 gcgagtgatg cagcggcggc aggcgcgatg gcatcgaaga tgccgagcag ggcgtgcgag
     7741 tagccgtgcg cgtcgccggc gatcagttcg gcgtagttga agtcgtcgcc ggtgtacatc
     7801 ttaacgctct tgtcgagccg gcggcgcatg gcgatctcgc ggtccttgtc caaaagcgag
     7861 atttttacgc cgtcgatctt ggcggccgag gcattgatga tcgccacagc ggtatccatc
     7921 gcccggtcga gatcgcgcgt gccccaatag cccgccagcg ccgggtcgaa catgtcgccc
     7981 agccagtgga tgatcactgg ctggcgcact tgagccagca cgcgctgata gacgcgggca
     8041 taatcgtcgg ccgagcgggc ggccctcacc agggcgcgcg aag
//
LOCUS       DASWGA010000081         3783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2286373, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000081 DASWGA010000000
VERSION     DASWGA010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3783
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2286373"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            221..1573
                     /locus_tag="VF991_01845"
     CDS             221..1573
                     /locus_tag="VF991_01845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HEX9555204.1"
                     /translation="MMGERQVMQSALFYEFSVETHVPADHMLRSIDRFVDLGDVRAHL
                     APFYSSTGRPSIDPELLIRILIVGYCFGIRSERRLCEEIHLNLAYRWFCRLGLEGAVP
                     DHSTFSKNRHGRFRDSNLLRHLFEDVVRRCIEEGLVGGEGFAVDASLIKADASRQRGV
                     TGSDGLPPTLVSRAIDEYLAVLDDAAFGAATEVTPKFISPADPAARWTGAHGGQAFFA
                     YSDNYLIDLDHAVIVDVEASTAVRQGEVTAAKTMLDRTIERFGVYPKRIAGDTAYGSG
                     EMLDWLVHERGIEPHVPVFDKSRRTDDTFSRDDFTYDHDGDVYFCPGGKMLTTKGTVV
                     NDGTTLLYRASKYDCDACALKPRCCPKEPARKVPYSIHEGARDLARDIATTEVYKTSR
                     RERKKVEMLFAHLKRILKLDRLRLRGPCGVQDEFLLAATAQNLRKLAKLIPMPQPITT
                     "
     gene            complement(1756..3297)
                     /locus_tag="VF991_01850"
     CDS             complement(1756..3297)
                     /locus_tag="VF991_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016555208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9555205.1"
                     /translation="MMGGNSELSGPDLKAGIAASDLGDGAMLLGHAYGEAVLLARRGR
                     EIFAIGATCTHYSGPLAEGLMVGDTVRCPWHHACFSLRSGEALAAPAFNPVSCWRVEE
                     TGGRIFVRDKLAAAERRVPAKPRPAEGAPQSIVIIGGGGAGYSAAEMLRREGFAGAIT
                     MLSADDSPPCDRPNLSKDYLAGTAPEDWIPLRPPEFYRENRIELVLKAEATEIDKGAR
                     RVTLADGRSHAFDKLLIATGAEPVRLDVPGAELPHVRTLRSLSDSRALVERAKASRRA
                     VVIGASFIGLEVAAALRHRGLEVHVVAPEKRPMERVLGPQMGDHVRSLHEQHGVIFHL
                     GRTAKAIDARRVTLDDGTTLEADLVVVGIGVRPRIALAERAGLAVDRGVLVNEYLETS
                     VPGIFAAGDIASWPDRYSGERLRIEHWVVAERQGQAAARNMLGGGERYAWPPFFWSQH
                     YDISIDYVGHATQWDTIDIDGDIAAHDVTLRYRKGARTLAVATIFRGRDSLAAEAAMQ
                     RGESP"
BASE COUNT          628 a         1304 c         1224 g          627 t
ORIGIN      
        1 ctgcgagcga agaggaactg atatcaaaat gcgcggacag gacattttcg actcagtgct
       61 catgcccaag cctgggagcg tgtccgaaag ctgaccggta gcggacgttc aagcgatggg
      121 acttttggtc tcagtgtgac cgattctgtt gaaaaacagc gagcttgtcg cggtgatgtg
      181 agggtgattc aatccagtca tcgaggcggg agacgcggcg atgatgggcg agcggcaagt
      241 gatgcaaagc gcgctgttct acgagttctc cgttgagact cacgtgccgg ccgatcacat
      301 gctgcgctcg atcgaccggt tcgtcgatct cggcgacgtg cgggcgcatc ttgcgccgtt
      361 ctatagctcg acaggccgcc cgtcgattga tcccgagcta ctgatccgca tcctcatcgt
      421 cggctactgc ttcggcatcc ggtccgagcg tcggctgtgc gaggagatcc accttaatct
      481 ggcgtacagg tggttctgcc gcttgggtct cgagggggca gtgcccgatc actcgacctt
      541 ctcgaagaac cgccacggcc gcttccgcga cagcaatctc ctccgccacc tcttcgagga
      601 cgtggtccgg cgctgcatcg aagaaggtct ggtcggcggc gaaggctttg ccgtcgatgc
      661 cagcctcatc aaggccgacg ccagccgcca acgcggcgtg actgggtccg acggactgcc
      721 tcccactctg gtgagccgcg ccatcgacga gtatctggcg gttctcgatg acgcagcctt
      781 cggtgccgcc accgaggtca cgccgaagtt catctcgccg gccgacccgg cggcgcgttg
      841 gacgggggcg catggcggtc aggccttctt cgcctactcc gacaactacc tcatcgacct
      901 cgatcatgcc gtgatcgtcg atgtcgaggc ctcgaccgcg gtgcgccagg gagaagtgac
      961 ggccgccaag acaatgctcg atcgcacgat cgagcgcttc ggcgtctacc ccaagcgcat
     1021 cgccggcgac acggcctatg gatcgggcga aatgctcgac tggcttgtcc acgagcgcgg
     1081 catcgagccg cacgtgcccg tcttcgacaa atcgcggcgc accgacgaca ccttctcgcg
     1141 cgacgacttc acctacgacc acgacggcga tgtctacttc tgcccaggcg gcaagatgct
     1201 caccaccaag ggcacggtcg tgaacgacgg gacgacgctg ctctatcgcg ccagcaagta
     1261 cgactgcgac gcctgtgcgc tcaagccccg gtgctgcccg aaggagcccg cgcgcaaggt
     1321 gccgtactcg atccacgagg gggcgcgcga tctcgctcgc gacatcgcca caaccgaggt
     1381 ctacaagacc tcgcggcgcg agcggaagaa ggtcgagatg ctgttcgcgc acctcaagcg
     1441 catcctgaag ctcgaccggc tccgactgcg aggtccctgc ggcgtacaag acgagttcct
     1501 tctcgccgcc accgcccaga acctccggaa gctggccaag ctcatcccga tgccgcagcc
     1561 gataaccacc taagcggcag cggcgggcgt caacagaccg ccatcggcag gcaagcacgg
     1621 ctgtccgcga tacctccggc cagttattca acagaatcgg tcattctgta gcttcgtgaa
     1681 gcactcgccg cctgaccgaa ttggacccga ttccagacat ccggttcggc ctatcttggc
     1741 ttatgagtgc ccgacctagg gtgattcgcc gcgctgcatc gcggcttccg ccgccaagct
     1801 gtcgcggccg cggaaaatgg tggcgacggc gagcgtgcgc gcgcctttgc ggtagcgcag
     1861 cgtcacgtca tgcgcggcga tgtcgccgtc gatgtcgatc gtgtcccatt gcgtcgcatg
     1921 gccgacataa tcgatcgata tgtcgtaatg ctggctccag aagaagggcg gccaggcgta
     1981 gcgctcgccg ccgccgagca tgttgcgcgc cgcggcttgc ccctggcgct ccgccaccac
     2041 ccagtgctcg atacgcagcc gctcgccgct gtagcggtcg ggccagctgg cgatgtcgcc
     2101 ggccgcgaag atgccgggca cgctggtctc gagatattcg ttgacgagca cgccgcgatc
     2161 gacggcgagc ccggcgcgct cggccagcgc aatgcgcggc cgcacgccga tgccgaccac
     2221 caccagatcg gcctcgagcg tcgtcccgtc gtcgagcgtg acgcgccgcg cgtcgatcgc
     2281 cttggccgtc cggccgagat ggaaaatgac gccatgctgc tcgtgcaacg agcgcacgtg
     2341 atcgcccatc tgcggcccca gcacccgctc catcggccgc ttttccgggg ccacgacatg
     2401 gacctcgagg ccgcgatggc gcagcgccgc cgccacttcg aggccgatga agctcgcgcc
     2461 gatcaccacg gcacggcgcg acgccttggc gcgttcgacc agcgcgcggc tgtcggaaag
     2521 cgagcgcaat gtccgcacat gcggcagctc ggccccgggc acgtcgagcc gcaccggctc
     2581 cgcaccggtg gcgatgagca gcttgtcgaa ggcatggctg cgtccgtcgg cgagcgtgac
     2641 gcggcgcgct cccttgtcga tttcggtcgc ctcggccttg agcaccagct cgatgcggtt
     2701 ctcccgatag aattcgggcg gacgcagcgg gatccaatcc tcgggcgccg tgccggcaag
     2761 gtagtccttg gacaggttcg gccggtcgca aggcggcgag tcgtcggcgc tgagcatggt
     2821 gatggcgccg gcgaaaccct cgcggcgcag catctcggcg gcgctatagc cggcgccgcc
     2881 gccgccgatg atgacgatgc tctgcggcgc cccctcggcc gggcgcggct tcgccggcac
     2941 gcgccgctcg gcggcggcga gcttgtcgcg cacgaagatc cggccgcccg tttcctcgac
     3001 gcgccagcac gacaccgggt tgaaggccgg cgccgccagc gcctccccgc tgcgcaggct
     3061 gaagcaggcg tggtgccagg ggcagcgcac ggtgtcgccg accatgagcc cctcggcgag
     3121 cgggccgctg taatgcgtgc aggtggcgcc gatggcgaag atctcgcggc cgcgccgcgc
     3181 cagcagcacc gcctcgccat aggcatgacc gagcagcatg gccccgtcgc caagatcgct
     3241 cgcggcaatc ccggccttga gatcgggacc gctcagctcg ctgttgccgc ccatcatccg
     3301 cctcccccct ttgcgccgat cttcgcagca gacgcagcct gcggccaaag gttcccgacg
     3361 tccatcctaa ccgttgcgat ggagggcgag gaaagcgtcg acattggcct tgtcgaggct
     3421 cttgccgagc taggatcggc cgggattttg cgccaaggcc gctccccccg agcagacggc
     3481 gaagcggacg atgatcgcgc cgccaccctt gagaagatcg cgccgcgcgg caaggaactg
     3541 gtccgtcacc gccgccatcc cgccatggtc gtgacagtgt ggctttggtc ggagcaccgg
     3601 gcaaccggcg cgatatgccg cgctgttcgc cggcgccgtc agggccgcac cgccggcgac
     3661 gccggctgga gcgagccctg ccctatttcg ccatcgcctt cttgtaatag gacaggtcaa
     3721 tgtacttgcc cggatcggca agggttttct ttggctcgcc atattccgag cgcagggcca
     3781 gca
//
LOCUS       DASWGA010000082         2548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1651810, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000082 DASWGA010000000
VERSION     DASWGA010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1651810"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VF991_01855"
     CDS             complement(<1..494)
                     /locus_tag="VF991_01855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HEX9555206.1"
                     /translation="MHVLATELATLDEADVAVDLGQSPAEIVVLSFSDSDLSALAAAW
                     QQDADVLPTLRLASLKRLKHPMSVDLYVDSVVARARLVIVRCLGGLDYWRYGLEHIAD
                     VARDNGVLFAALPGDDRADARLASVSTLAAVPLARFEQFFREGGVDNLHQALRYAATL
                     LGRDL"
     gene            complement(950..1981)
                     /gene="cobW"
                     /locus_tag="VF991_01860"
     CDS             complement(950..1981)
                     /gene="cobW"
                     /locus_tag="VF991_01860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein CobW"
                     /protein_id="HEX9555207.1"
                     /translation="MSVAKVPCTIVTGFLGAGKTTLVRHVLENAGGRRLAVIVNEFGD
                     VGIDGEILKSCGIESCSEDSIVELANGCICCTVADDFVPALNGLLDRPSPPEHIVIET
                     SGLALPKPLVKAFNWPEIASRVTVDGVVAVVDGAAVAAGRFADDPEAVARQRAADPSL
                     DHDNPLEEVFEDQLLCADLVILNKSDLMSREQRQAVTTEIGKTLPRAVKVVEAENGRV
                     PISVLLGLGAKAESDLAGRPSHHEVEGEHDHDDFDTFIIDLPAFAAPQALVDRMVKAA
                     EAHDVLRMKGFVEIEGKPMRLLVQGVGARIQHQFDRKWPPDQARRGRLVVIGESGFDR
                     DAIRALILG"
     gene            complement(1984..2358)
                     /locus_tag="VF991_01865"
     CDS             complement(1984..2358)
                     /locus_tag="VF991_01865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1636 domain-containing protein"
                     /protein_id="HEX9555208.1"
                     /translation="MTSSTLYVCITCRSEATAVQEPRPGARLFAAVERQLAANGSGLT
                     VVAVECLSNCQRSCSAAVSAPGKWTYVIGGLDPDQHAADIVAFARLHQAHDQGLPVWR
                     ERPDHIRKNTVARVPPMQMIKE"
BASE COUNT          435 a          862 c          859 g          392 t
ORIGIN      
        1 agatcgcgac ccagcaaggt cgcggcgtaa cgcaaggcct ggtgcaggtt gtcgacgccg
       61 ccttcgcgga aaaactgctc gaaacgggcg agcggcacag ccgccagagt agagaccgat
      121 gcgagccggg cgtcggcacg gtcgtcgccc ggcagggcgg cgaacagcac gccgttgtcg
      181 cgcgccacgt cggcgatgtg ctccaggccg tagcgccaat agtcgaggcc gcccaggcag
      241 cgcacgatga ccagacgcgc ccgcgccacg acgctgtcga catagaggtc gaccgacatc
      301 ggatgtttta ggcgcttcag gctggcgagc cgcagggtcg gcagaacgtc ggcatcctgt
      361 tgccaggccg ccgccaacgc cgacaggtcc gaatcggaaa acgacagcac gacgatctcg
      421 gccggcgact ggccgagatc gaccgcgaca tcggcctcgt cgagggtcgc aagctcggtc
      481 gcgagcacat gcatggggtc taacgccttc tctcggtcgg cgcggagggg tttccggtat
      541 ttccggcgtt tccggtagtc gtttttgaga cgtgcggacc gctggccggc cccagcggca
      601 ggcgtgacgg atcggcgcgc accgccatcc cccaggaaag ggttgggcgc ctgaaccgca
      661 gcctgccgac ggacctcggc agcggcacga gaaacttaag tatgaaactg gacgatgtca
      721 agtaaaactt ggagacacgc atccacggga ataagtgcgc accacggagg gggtattcgc
      781 ctctctcgct ctttcctctc ccgtcatacg ggggaggtgc cccgcagggg cggaggggga
      841 aagccgcagc aaagtcgcct gcaaatctcg gatcattgct cttcaagaat cacctgtgtc
      901 gctttccccc tccctgccct cccccgtatg acgggcgagg aaaagagggt cagcccaata
      961 tcagggcacg gatcgcgtcc ctgtcgaagc cgctctcgcc gatcaccacc agccggccgc
     1021 gccgcgcttg atcgggcggc cacttgcggt cgaactggtg ctggatgcgc gcgccgacgc
     1081 cctgcaccag cagacgcatc ggcttgcctt cgatttcgac gaagcccttc atgcgcagga
     1141 cgtcgtgcgc ttccgccgcc ttcaccatcc gatcgaccag cgcctgcggc gcggcgaacg
     1201 ccggcagatc gatgatgaag gtgtcgaagt cgtcgtggtc gtgctcgccc tcgacctcgt
     1261 gatgcgaggg tcggccggcg aggtcggact cggccttggc gccgaggccc agcagcacgc
     1321 tgatcggcac ccggccgttc tcggcctcga cgaccttcac cgcccgcggc agggtcttgc
     1381 cgatctcggt cgtgaccgcc tggcgctgct cgcgcgacat gaggtctgat ttattcagga
     1441 tcaccaggtc ggcgcagagc agctggtcct cgaacacctc ctcgagcgga ttgtcgtgat
     1501 cgagcgaggg gtcggcggcg cgctggcgcg ccacggcctc gggatcgtcg gcgaagcggc
     1561 cggcggcgac cgccgcgccg tcgaccaccg ccacgacgcc gtcgaccgtg acccgcgagg
     1621 cgatctcggg ccagttgaag gccttgacca atggcttggg caaggcgagg cccgacgtct
     1681 cgatgacgat atgttcgggc ggcgacggcc ggtcgagcaa gccgttcagc gccggcacga
     1741 aatcgtcggc cacggtgcag cagatgcagc cgttcgccag ctcgacgatg ctgtcctccg
     1801 agcagctttc gatgccgcag ctcttcagga tctcgccgtc gatgccgaca tcgccgaact
     1861 cgttgacgat cacggcgagc cggcggccgc cggcattctc cagcacgtgg cgcaccagcg
     1921 tcgtcttgcc ggcaccgaga aagccggtga cgatcgtgca gggaaccttg gcaacgctca
     1981 tctctactcc ttgatcattt gcatcggcgg cacgcgcgcc acggtgttct tgcggatgtg
     2041 gtccgggcgt tcccgccata ccggcaggcc ttggtcatgc gcctggtgca ggcgggcaaa
     2101 cgccacgatg tcggccgcat gctgatccgg atcgaggccg ccgatcacat aggtccattt
     2161 gcccggcgcc gacacggcgg ccgagcagct cctctggcag ttggacaggc attcgacggc
     2221 aacgacggtc aagccggaac cgttggcggc aagctgccgc tcgacggccg cgaacaggcg
     2281 cgcaccggga cgcggctcct gcacggcggt cgcttcgctg cggcaggtga tgcagacgta
     2341 gagcgtcgac gatgtcacgc gatggctgcc tcagccggcg aggccggtgg ccaccgcggt
     2401 cgcgccgccc gccacagcca ccaggatgcc gaccaccgtc agcccgctgg tgcgcgccgg
     2461 ccaacgggcg aggcccagca cggcgctgta gaccgcaagc gcgatggcgg tctggacgat
     2521 cagcaggccg gcgagatacg ccagcagc
//
LOCUS       DASWGA010000083         3788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_10606, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000083 DASWGA010000000
VERSION     DASWGA010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3788
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10606"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..530)
                     /locus_tag="VF991_01870"
     CDS             complement(<1..530)
                     /locus_tag="VF991_01870"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEX9555209.1"
                     /translation="MLAARLATAAVLIAGLLAALFYLPSLWLKLVIGAVVALAAFEWG
                     RLCRLDAYRYAGLLVAAYGIALWIRSDVVFALAAAFWVAAVPFWLWRGVEARQAGLLA
                     AAGLFVLIPAGLAVVALPAQQVLLVLGLTWVADTAAYFVGSRFGRRKLAPSISPSKTW
                     EGAAGGLLGTLSYAII"
     gene            complement(535..1305)
                     /gene="uppS"
                     /locus_tag="VF991_01875"
     CDS             complement(535..1305)
                     /gene="uppS"
                     /locus_tag="VF991_01875"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HEX9555210.1"
                     /translation="MTHVSSTQEIPAHGEVPRHVAIILDGNGRWAKGRRLPRIAGHRR
                     GVEAVRETVRACVERGVEYLTLFAFSSENWRRPADEVALLMQLFQVALSNEVDKLHRN
                     GVRLKVVGDTERFDPAIRRLIEQGERLTAENRRLTLTIAANYGGRWDILQALSRLMAQ
                     RPAAADAPLDESALAPYLAMSYAPEPDLFIRTGGERRISNFLLWQLAYAELYFTDTLW
                     PDFDAAALDAAFASYRQRERRFGRTGEQAAAAKRAEVA"
     gene            complement(1302..1862)
                     /gene="frr"
                     /locus_tag="VF991_01880"
     CDS             complement(1302..1862)
                     /gene="frr"
                     /locus_tag="VF991_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003811796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEX9555211.1"
                     /translation="MVIAEVKKTTEQKMHKSVEAFKTDLAKVRTGRAHTGLLDHVMVD
                     YYGTPTPINQIAKVILIDARTIGVTPFEKKMIQAVDKAIREADLGLNPATTGDTVRVP
                     MPPLTEERRRELIKVVKHEAENARVAVRNLRRDAIHSLKEGLKKKEVSENDERRAQDE
                     VQKMTDRHIAEIDKLLQQKETELLAV"
     gene            complement(1884..2606)
                     /gene="pyrH"
                     /locus_tag="VF991_01885"
     CDS             complement(1884..2606)
                     /gene="pyrH"
                     /locus_tag="VF991_01885"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEX9555212.1"
                     /translation="MISAAARYRRILLKISGEALMGDQEYGLDPAMLGHVAGEIRSVH
                     ELGVQICLVIGGGNIFRGVKGAAAGMERATADYMGMLATVINSLAMQSALERNGIVTR
                     VLSAITMQAVCEPYIRRRAIRHMEKGRVVVFAAGTGNPFFTTDTAAALRGSEVGAEIV
                     IKATKVDGVYTADPQRDPRAQRYSRISFDEAIHRNLKVMDATALTLCRDQKLPINVFS
                     IFKKDALRRVVLGEDEGTLVHV"
     gene            complement(2760..3683)
                     /gene="tsf"
                     /locus_tag="VF991_01890"
     CDS             complement(2760..3683)
                     /gene="tsf"
                     /locus_tag="VF991_01890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEX9555213.1"
                     /translation="MAEITAALVKELRETSGAGMMDCKRALTETGGNLQDAVDWLRKK
                     GLAAAAKKAGRVAAEGLIGVATKGTSGALIEVNSETDFVARNDAFQNLVRQVAERALA
                     DGDIETIKAAAFPGTGRSVAEELTHLVATIGENMNLRRARRLEVAKGVVVSYVHNALA
                     AGLGKIGVLIALESTGDAGKLAALGKQLAMHVAAANPQFLDIAAVDKASLDRERDILR
                     EQAKASGKPDAIIDKMVEGRLRKYYEEVVLLEQIFVVDGETRIAKVVEATAKEAGAPI
                     KIAGFVRFALGEGIEKEQADFAAEVAAQLGR"
BASE COUNT          586 a         1293 c         1252 g          657 t
ORIGIN      
        1 cagatgatag cgtagctcag ggtcccgagc agccctccgg cagcgccctc ccaggtcttt
       61 gacgggctga tggagggcgc gagcttgcgg cgtccaaacc ggctgccgac gaagtaagcc
      121 gccgtatcgg caacccaggt cagcccgagc acgagcaaga cctgctgcgc aggcaacgcg
      181 accaccgcca agccggcagg aatcagcacg aagagtcccg ccgcggcgag tagcccggcc
      241 tgccgcgctt ccacgccgcg ccacagccag aacggcaccg ccgccaccca gaaggccgcc
      301 gccagcgcga agacgacatc agaacgaatc cacagggcta tgccgtaggc ggcaaccagg
      361 agccccgcat accgataggc atcaaggcgg cagaggcggc cccattcgaa cgcggcgagg
      421 gcgaccaccg cgccgatcac gagcttcaac cagagggagg ggagatagaa cagcgccgcc
      481 agcaggccgg cgatgagcac cgccgccgtc gcgagccgcg cagccagcac gccgtcaggc
      541 gacctcagcg cgtttcgctg ccgcggcctg ctcgccggtc cgaccaaagc ggcgctcgcg
      601 ctgccggtag gaggcaaacg ccgcgtcgag cgccgcagca tcgaagtcgg gccacagcgt
      661 atcggtgaaa tagagctccg catacgccag ctgccagagg agaaaattgc tgatgcgccg
      721 ttcccctccg gtgcggatga acaggtccgg ctcgggcgca tagctcatcg ccaggtaggg
      781 cgccagcgcc gactcgtcga gcggcgcgtc ggccgccgca gggcgctgcg ccatcagccg
      841 cgacagcgcc tgcagaatgt cccagcggcc gccgtagttc gccgcgatgg tgagagtcag
      901 gcggcgattt tcggcggtga gcctctcgcc ctgctcgatc agccgccgga tggcgggatc
      961 gaagcgctcg gtatcgccga ccaccttcag ccgcacgcca ttgcggtgca gcttgtcgac
     1021 ctcgttcgac agcgcgacct ggaacagctg catgagcagc gccacctcgt cggccggacg
     1081 ccgccagttc tcggagctga atgcgaacag cgtcaggtat tcgacgcccc gctcgacgca
     1141 ggcgcgcacg gtttcgcgca ccgcctccac gccgcgccgg tgccccgcga tgcgcggcag
     1201 ccgccggccc ttcgcccagc ggccgttgcc gtccaggatg atcgccacat gccgtggcac
     1261 ttcgccgtgc gcggggattt cttgcgtcga actgacgtgc gtcatacggc caggagctcg
     1321 gtttcttttt gttgcagcag cttgtctatc tcggcgatat gccggtcggt catcttctgc
     1381 acctcgtcct gggcgcggcg ctcgtcgttc tcggagacct ccttcttctt caggccctct
     1441 ttcagcgaat ggatcgcatc gcggcgcagg ttgcgcacgg ccacgcgcgc gttctcggcc
     1501 tcgtgcttca ccaccttgat gagctccctg cgccgctctt ccgtgagcgg cggcatcggc
     1561 acgcgcaccg tgtcgcccgt ggtggcaggg ttgagtccga gatcggcttc gcggatcgcc
     1621 ttgtcgacgg cctggatcat tttcttctcg aacggcgtga cgccgatggt gcgggcgtcg
     1681 atgaggatca ctttcgcgat ctggttgatc ggggtcggcg tgccgtagta gtccaccatg
     1741 acgtgatcga gcaatccggt gtgcgcgcgc ccggtgcgca ccttggcgag gtcggtcttg
     1801 aaggcctcga cgctcttgtg catcttctgc tcggtggttt tcttgacttc agcgatcacc
     1861 attgccgtct ccgctgccgc agatcatacg tgaaccaggg tgccctcgtc ctcgccgagg
     1921 accacgcgcc gcagggcgtc cttcttgaag atgctgaaga cattgatcgg cagcttctgg
     1981 tcccggcaca gcgtgagagc ggtggcgtcc atcaccttca ggttgcggtg gatcgcctcg
     2041 tcgaagctga tgcgggagta gcgctgggcg cgggggtcgc gctgcggatc cgccgtatag
     2101 accccgtcga ccttcgtcgc cttgatcacg atctcggccc cgacctcgct gccgcgcagg
     2161 gcggccgcgg tatcggtggt gaagaacggg ttgccggtgc cggcggcgaa gacgacgacc
     2221 cggcccttct ccatgtggcg gatggcgcgc cgcctgatat agggttcgca gaccgcctgc
     2281 atggtgatcg ccgatagcac gcgcgtgacg atgccgttac gctccagcgc gctctgcatg
     2341 gcgagcgagt ttatcacggt cgccagcatg cccatgtaat cggcggtcgc ccgctccatc
     2401 ccagcggcag cgcccttcac gccgcggaag atattgccgc cgccgatcac gaggcagatc
     2461 tgcacgccga gttcgtggac ggagcggatc tcgccggcga catggccgag catggccggg
     2521 tcgagcccgt attcctgatc tcccatcagc gcctcgccgg atatcttgag caagatgcgg
     2581 cgatagcggg cggcagcgga tatcaagctc ggaccctcag gcgggcaagt tgttacggtc
     2641 gtgacacgcg cttgtcgtgc atcttgccgc gcgcttccag agtccgatca tacattaatc
     2701 cggtcctcga tgctcgcctt caatgcgtcc gcaacaggga agcctggtcg acgtctgtct
     2761 caacggccga gttgggcggc gacctcggcg gcgaaatcgg cctgctcctt ctcgatcccc
     2821 tcaccgaggg caaagcgcac gaagccggcg atcttgatcg gcgcgccggc ttccttggcg
     2881 gtcgcctcga ccaccttggc gatccgggtc tcgccgtcga cgacgaagat ctgctcgagc
     2941 aggacgacct cctcgtagta tttgcgcagt cgcccctcga ccatcttgtc gatgatcgcg
     3001 tcgggcttgc cgctcgcctt ggcctgctcg cgcaggatgt cgcgctcgcg gtcgagcgag
     3061 gccttgtcga ccgctgcgat gtcgaggaat tgcgggttgg ccgccgcgac gtgcatggca
     3121 agctgcttgc cgagggcggc gagcttgccg gcatcgccgg tcgactcgag agcgatgagc
     3181 acaccgatct tcccgagccc ggcggccagc gcgttgtgga cgtaggagac gacgacgccc
     3241 ttcgccacct cgagccgtcg ggcgcggcgc aaattcatgt tctcgccgat ggtggcgacg
     3301 agatgggtga gctcctcggc gacgctgcgc ccggtgcccg ggaacgcggc cgccttgatc
     3361 gtctcgatgt cgccatcggc gagggcgcgt tcggcgactt ggcggacgag gttctgaaag
     3421 gcgtcgttac gggcgacgaa gtcggtctcg gaattgacct cgatcagcgc gccgctggtg
     3481 cctttggtgg ccacgccgat cagcccttcg gcggcgaccc gcccggcctt cttggccgcg
     3541 gcggccaatc ccttcttgcg cagccagtcg accgcatcct gcagattgcc cccggtctcg
     3601 gtcagcgccc gcttgcaatc catcatgccg gcgcccgagg tctcgcgcag ctccttgacc
     3661 agcgcggcgg tgatctcggc cattcgtctt ccttccagcc tatgggcaaa ctacgagagt
     3721 agagcgccgc ccgccgggag cgggcggcgc cgtcgatcag gccgtggccg acggggccgc
     3781 gggggccg
//
LOCUS       DASWGA010000084         2906 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2286572, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000084 DASWGA010000000
VERSION     DASWGA010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2286572"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /locus_tag="VF991_01895"
     CDS             complement(<1..364)
                     /locus_tag="VF991_01895"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9555214.1"
                     /translation="MSDTLVLRAATAADAATIAAIIAASFEEYRGRLEPESGAFRETA
                     EAVAAELAREAGAIIAERNGAVVGCVMVKLLEDDLYLGRLAVVPAARGQGIARRLVEA
                     VEDEARRRELAGVRLGVRI"
     gene            410..1243
                     /locus_tag="VF991_01900"
     CDS             410..1243
                     /locus_tag="VF991_01900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9555215.1"
                     /translation="MGYQTIEVRKLTPAIGAEIFGVDLAQPLGNQAFQEIHDALMDNL
                     VIFFRDQVLTHEQHKAFGRRFGELHLHPTSTRGDGEHPEILVIKADEHSKHVAGEEWH
                     SDVSCDPEPPMGSILYMKELPPDGGGNTLFANMYRAYETLSPPIQLMCEGLTAVHDGA
                     QVYGGRFGQTPKAGGFPRNEHPVVRTHPVTGRKALYVNPNFTTHIVGLKRAESDALLG
                     MLYRHSETPEFHCRFAWQPNSMAFWDNRAAMHHAMWDYFPHKRLGYRVTVKGDKPFYR
                     A"
     gene            1278..2057
                     /locus_tag="VF991_01905"
     CDS             1278..2057
                     /locus_tag="VF991_01905"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555216.1"
                     /translation="MKVKDKVCVVTGAAGGIGEAIARRYAKEGAKGVVVADRDAGRLE
                     AVAKDIKGIAVACDVAKEADIRHLVAEAERHYGPVDIFFSNAGIGRGGHEDALDKDWA
                     DSWAIHVMAHVYAARALVPGMLARKSGYLLNTASAAGLLASLGSAPYGVTKHAAVALA
                     EHLSIQYGDKGIAVSVLCPQAVDTNMLRMAGATAASVDGVLNTDAVAQTVIEVMDAET
                     FLILPHPEVKEYLTRKTGDYDRWLRGMRRLRDKSGEGQRRA"
     gene            2151..>2906
                     /locus_tag="VF991_01910"
     CDS             2151..>2906
                     /locus_tag="VF991_01910"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9555217.1"
                     /translation="MISYIVSLFAGIGLWTAIGVTLVAGLMRGFAGFGSAMLMAPIFA
                     ILFGSADMVVTVVAIELVVSLQLFPQVRRDADWHVLTPMSLAACAAMPLGVWLLASVD
                     KNTIVTAVSAVIVGFVVLMWSGWKYTGRRSTAATIAVGAVSGAMMATTSVGGPPVLLY
                     LLSGNDSPQVNRANIVTYYFLTQFLLIVIVLATGVAGWEALARAVILFPVMIAGAWAG
                     GRLFHGLASERLYRNVALGILFATGMFGLLRNWL"
BASE COUNT          477 a          976 c          959 g          494 t
ORIGIN      
        1 cgatgcgcac gcccagccgc acgccggcca gctcgcgacg gcgcgcctcg tcctcgaccg
       61 cctcgaccag ccgccgggcg atgccctgac cgcgcgcggc gggcaccacg gccagccggc
      121 ccaaatagag atcgtcctcc agcagcttga ccatgacgca gccgactacc gcgccgtttc
      181 gctccgcgat gatggcgccg gcttcgcgcg cgagttcggc ggcgacggcc tccgctgtct
      241 cgcggaaggc gccggactcg ggctcgaggc ggccgcgata ttcctcgaac gaggcggcga
      301 tgatcgccgc gatggtcgcg gcatcggccg cggtcgcggc gcgcaggaca agagtgtcgc
      361 tcatggtcgt tttctcgcgt aggcttgcct gataggtggg aaaaagcaaa tgggttacca
      421 gaccatcgaa gtgcgaaagc tgacgccggc gatcggcgcg gaaatcttcg gcgtcgatct
      481 tgcccagccc ctcggcaacc aggccttcca ggaaatccac gatgctttga tggataatct
      541 ggtgatcttc tttcgcgacc aggtgctgac tcacgagcag cacaaggcgt tcggccgccg
      601 gttcggcgag ctgcatctgc atccgacctc gacccgcggc gacggtgagc atccggagat
      661 cctggtcatc aaggccgacg aacattccaa gcacgtcgct ggcgaggaat ggcattccga
      721 cgtcagttgc gaccccgaac cgccgatggg cagcatcctc tacatgaagg agctgccgcc
      781 cgacggcggc ggcaacacat tgttcgccaa catgtaccgc gcctacgaaa ccctgtcccc
      841 gccgatccag ctgatgtgcg aggggctgac ggcggtccat gacggcgcgc aggtctatgg
      901 cggccggttc ggccagacgc ccaaggcggg cggctttccc cgcaacgagc atccggtggt
      961 gcgcacccat ccggtgaccg gccgcaaggc cttgtatgtc aatcccaact tcaccacgca
     1021 catcgtcggc ctgaaaagag ccgaaagcga tgcgctgctc ggtatgctct accgccacag
     1081 cgagacgccg gagttccact gccgcttcgc ctggcagccc aactcgatgg ccttctggga
     1141 caaccgggcg gccatgcatc acgccatgtg ggactatttt ccccacaaac ggctgggcta
     1201 tcgcgtcacg gtcaagggcg acaagccgtt ctaccgcgca tagggacgcc ctgcttgatc
     1261 tggccacgga gaaataaatg aaagtgaagg acaaggtctg cgtcgtcacc ggcgcggcgg
     1321 gcggcatcgg cgaggcgatc gcgcggcgct acgccaagga aggcgccaag ggcgtggtcg
     1381 tggccgatcg ggacgccggc cgcctggaag cggtcgccaa ggacatcaag ggcatcgcgg
     1441 tggcctgcga cgtcgccaag gaagccgaca tccgccacct cgtggccgag gccgagcggc
     1501 attacgggcc ggtcgacatc ttcttctcca atgccggcat cggccgcggc ggccacgagg
     1561 atgctttgga caaggactgg gccgacagct gggccatcca tgtcatggcc catgtctatg
     1621 ccgcgcgcgc cctggtgccg ggcatgctgg cgaggaagtc gggctacctg ctcaacaccg
     1681 cgagtgccgc gggccttttg gcctcgctgg gctcggcgcc ctacggcgtc accaagcatg
     1741 ccgccgtggc gctggccgag catctgtcga tccagtacgg cgacaagggc atcgcggtct
     1801 ccgtgctctg cccgcaggcg gtcgatacca acatgctgcg catggcgggc gccaccgcgg
     1861 cgtcggtcga cggcgtgctc aacaccgacg ccgtggcgca gaccgtgatc gaggtgatgg
     1921 atgccgagac cttcctcatc ctgccgcatc ccgaggtgaa ggaatacctg acgcgcaaga
     1981 ccggcgacta cgaccgctgg ctgcgcggca tgcgccgcct gcgcgacaag agcggcgagg
     2041 gccagcgtcg ggcatgattg tcattgctgg gagcgcgcca ctctgtggcg ctcatgggca
     2101 ttgtatttaa caaagacgcg ccacggagtg gcgcgctccc agcaaacaac ttgatctcct
     2161 acatcgtctc tctcttcgcc ggcatcggcc tgtggaccgc gatcggcgtc accctggtgg
     2221 ccggcctgat gcgcggcttc gcgggcttcg gctcggccat gctgatggcg ccgatcttcg
     2281 ccatcctgtt cggctcggca gacatggtgg tgacggtggt ggcgatcgag cttgtggtgt
     2341 cgctgcagct cttcccccag gtccgccgcg atgccgactg gcatgtgctc acgccgatga
     2401 gcctcgccgc ctgcgccgcc atgccgttgg gcgtctggct gctggcaagc gtcgacaaga
     2461 acaccatcgt gacggcggtg tcggccgtga tcgtgggctt cgtcgtgctg atgtggagcg
     2521 gctggaaata caccgggcgg cgctcgaccg ccgccaccat cgccgtcggc gccgtgtcgg
     2581 gcgccatgat ggccacgacc agcgtcggcg gcccgccggt gctgctctac ctcctgtcgg
     2641 gcaacgactc accacaggtc aatcgcgcca acatcgtcac ctattatttc ctgacgcagt
     2701 tcctgctgat cgtcatcgta ctggcgaccg gcgtggccgg ctgggaggcg ctggcccgcg
     2761 ctgtcatcct cttcccggtg atgattgcgg gcgcgtgggc cggcgggcga ctattccacg
     2821 gcctcgccag cgagcgtctc taccgcaacg tggcgctcgg catcctgttc gcgacgggga
     2881 tgtttgggtt gctcaggaac tggctg
//
LOCUS       DASWGA010000085         2359 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2158898, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000085 DASWGA010000000
VERSION     DASWGA010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2359
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2158898"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..392
                     /locus_tag="VF991_01915"
     CDS             <1..392
                     /locus_tag="VF991_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555218.1"
                     /translation="GASPGGWTWVLAQLGAEVLAVDKAPLDPTVAALAGVDWRGESAF
                     ALEPASVGPVDWLFSDIVCYPARLLRLVEKWRASGLVKNFVCTLKFQGATDHDAAAAF
                     AAIPGAKVQHLHHNKHELTVILSPLSS"
     gene            532..1557
                     /locus_tag="VF991_01920"
     CDS             532..1557
                     /locus_tag="VF991_01920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555219.1"
                     /translation="MLKSVGAAALLALIAGPVLAQPKTLTVAGYGGSWEQQLRKDVFP
                     AFEAKHGVKIDYVAGNSTDTLAKLQAQKGNQVIDVAIVDDGPMYQAIQLGFCAKLEGL
                     DKSELYPAAIFKDDKAVAVGQTGTGFMINTKTFKEKGWATPTSWNDLKDPKFKKLLVI
                     PPINNTYGLYTLMMYARMNGGGEKNIEPGFKVMKADINPNVLVYEPSPGKMTELFQSN
                     QGQIAVWGTGRVQAFANTGFPVDFIYPKEGAPILLASACPVAKSAVNPLAQAFIKVLI
                     SAPVQTSFAKEMGNGPVNTKVDVSMPELRMAPVGARAKLVIQPDWDTINAQREDWTKR
                     WNREVER"
     gene            2054..>2359
                     /locus_tag="VF991_01925"
     CDS             2054..>2359
                     /locus_tag="VF991_01925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9555220.1"
                     /translation="MSFLVLEALTKRFGGHVAVDGLSLGVDKGEFVALLGPSGCGKTT
                     TLQMIAGFVEPTSGAVRLEGRDLLAMKPSRRGRGIVFQSYALFPHMTVAENVAFGLEM
                     "
BASE COUNT          433 a          748 c          777 g          401 t
ORIGIN      
        1 tcggcgcctc gcccggcggc tggacctggg tgctggccca gctcggcgcc gaggtgctcg
       61 ccgtcgacaa ggcgccgctc gatcccacgg tcgccgcgct ggccggcgtc gactggcggg
      121 gcgagagcgc ctttgcgctg gagcccgcga gcgtcgggcc ggtcgactgg ctgttctccg
      181 acatcgtctg ctatccggcg cggctgctgc gcctggtgga gaaatggcgg gcgtccgggc
      241 tggtgaagaa tttcgtctgc acgctgaaat tccaaggtgc gacggatcac gacgcggccg
      301 ctgctttcgc cgccattccg ggcgccaagg tccagcattt gcaccacaac aagcacgagt
      361 taactgtcat tctgagccct ctgtcatcct gaggcgaagc cgaaggatct catcgccgtc
      421 gatgagatcc ttcgctgcgc tccagcgcgg gggtgacccc gcgcgagatg acaggggtgt
      481 ctgtcttttc ttatggtagt cttccgtccg gggaacctgg gagacctaaa aatgctgaaa
      541 tccgtcggcg ccgccgcctt gcttgccctg atcgccggcc ccgtcctggc gcagcccaag
      601 acgctgaccg tggcgggcta cggcggctcc tgggagcagc agcttcgcaa ggacgtcttt
      661 ccggccttcg aagccaagca tggcgtcaag atcgactatg ttgccggcaa ttcgacggac
      721 acgctggcca agttgcaggc gcaaaagggc aaccaggtga tcgacgtggc gatcgtcgac
      781 gacggcccga tgtaccaggc gatccagttg ggcttctgcg ccaagctcga ggggctggac
      841 aagagcgagc tctatcccgc cgcgatcttc aaggacgaca aggcggtcgc ggtcggccag
      901 accggcaccg gcttcatgat caacaccaag accttcaagg agaagggctg ggccacgccg
      961 acctcgtgga acgacctgaa ggatcccaag ttcaagaagc tcctggtgat tccgccgatc
     1021 aacaacacct acgggctcta tacgctcatg atgtacgctc gcatgaacgg cggcggcgag
     1081 aaaaacatcg agcccggctt caaagtgatg aaggccgaca tcaatcccaa cgtgctggtc
     1141 tacgagccgt cgcccggcaa gatgacggag ctgttccagt cgaaccaggg ccagatcgcg
     1201 gtgtggggca ccgggcgcgt acaggccttc gccaacaccg gctttccggt cgacttcatc
     1261 tatcccaagg aaggcgcgcc gatcctgctc gcctcggcct gcccggtcgc caagtccgcg
     1321 gttaatccgc tggcccaggc gttcataaag gtcctgatct cggccccggt gcagacgagc
     1381 ttcgccaagg aaatgggcaa cggcccggtc aacaccaagg tcgacgtcag catgcccgag
     1441 ctgcgcatgg ccccggtcgg cgcgcgcgcc aagctggtga tccagcctga ttgggacacc
     1501 atcaacgccc agcgcgagga ctggaccaag cgctggaacc gcgaggtcga gcgctgacgc
     1561 ggtgctgact gaaccggtta ccctgcctgc ccacggccgg aagtgccatt aaatatagtg
     1621 cttgctcgca cttaagattt cgcttatgct cctctcctgt cagaaggcgg agcagccgca
     1681 tgcacctttg ggaatcgaaa acgaccggcg agaagggcgg tcggtcgccg cagccaaaat
     1741 cgttagcgga aattgcggaa attgcggaaa ttcaaaatgc agcgcacccg ttgggtgaga
     1801 cagtgaaaca gcgggcggcc aggtacggct ggggcggggg cggcggccct ttcccggctg
     1861 aatcgacaaa agggtagcgg aaagtgcgga aaccccagcc gatgccgatt ccaccgatgt
     1921 tcgggccgcc ctggcaccgg cgctgtcgga ctagcggaaa gtgcgcaaac cccccgcgcc
     1981 cgcgccgtcg gcgccacctg ctggcgcggc cgggctgcta tactaggagc ggcttcgagg
     2041 actggcagga ggcatgagct tcctggttct cgaggccctg accaagcgct tcggtgggca
     2101 tgtcgcggtc gacggcctgt cgctcggcgt cgacaagggc gagttcgtcg cgctgctcgg
     2161 gccgtcgggc tgcggcaaga ccacgacctt gcagatgatc gcgggtttcg tcgagccgac
     2221 ctcgggcgcg gtgcggctcg agggtcgcga cctcttggcc atgaaaccgt cgcgccgcgg
     2281 gcgcggcatc gtgttccaga gctacgcgct gtttccgcac atgaccgtgg ccgagaacgt
     2341 ggcgttcggg ctcgagatg
//
LOCUS       DASWGA010000086         5599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_137880, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000086 DASWGA010000000
VERSION     DASWGA010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5599
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137880"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..841)
                     /locus_tag="VF991_01930"
     CDS             complement(35..841)
                     /locus_tag="VF991_01930"
                     /inference="COORDINATES: protein motif:HMM:NF016974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl/asparaginyl beta-hydroxylase
                     domain-containing protein"
                     /protein_id="HEX9555221.1"
                     /translation="METHTTSNIGQKGRFYLTKNIWLPQEPIENLNLKMSDIILRRMP
                     RLPLAADDALKIFPVLGELKKSHDKIKADLQYLLSHHEEIPALHEVHPRDLYVPGRAW
                     RTFLLKIWGHEITENTAAVPDTYAAISRIPGVHTALFSILAGGAEIEPHRGSAAGVIR
                     FHYPLIVPTEPEKCWIEIGGHHFFWEEGVPLVFDDTREHWVKNQTEETRVVLIIDFNA
                     DMPFPVNLYTGLRYNLIRRSAEIKAVYERAAIGVPPRDKAAAVPDLAKAA"
     gene            1048..1617
                     /locus_tag="VF991_01935"
     CDS             1048..1617
                     /locus_tag="VF991_01935"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX9555222.1"
                     /translation="MTRIPGRRVFLRAPTMDDWAEWAELRARSRAFLTPWEPTWPEDS
                     LGRDHFRRRLRQQAREWRSGEAYGLFVFTNEGRRLAGGINLSNVRRGVAQAASVGYWM
                     GQPYAGQGLMTDALRAVLPFVFDELRLHRLEAACLPHNEPSKAVLAKVGFHEEGLARQ
                     YLRINGHWADHLLFALLRADYDVLLRAAR"
     gene            1636..2505
                     /locus_tag="VF991_01940"
     CDS             1636..2505
                     /locus_tag="VF991_01940"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0018576 - catechol 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0009712 - catechol-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEX9555223.1"
                     /translation="MRNLTPASITQAFADYAKNAPSQRTRTLLVSLAGHLHSFVRENK
                     LTQAEWTAAIDALTRATAFTDDKRNEYILFSDLLGVSSLVDMVNAATSGTPSSVLGPF
                     HIEGAPELANGGDLWRGQVGDALVVSGKVTDEKGAPAKGAVLALWQNAGNGLYAQQDK
                     DQKPTNYHARLTVAADGSFAFSTVRPVSYTVPDDGPAGDMLRVLGREAWRPAHLHMII
                     HAPGHKPLITEFFPEDDKYLDRDAVFGVRAGLVLPFRRVADRAQLPANLAARDKLPLP
                     VWTAKLDLTLPPA"
     gene            2505..3245
                     /locus_tag="VF991_01945"
     CDS             2505..3245
                     /locus_tag="VF991_01945"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007197415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555224.1"
                     /translation="MRLVGVRGVSKVFANGVQALADVSLDVEMSEFVSVLGPSGCGKS
                     TLLQLIAGLIQPSAGTIEWPGSKADIGFVFQEPTLMPWATALANVVLPLRLRGMDKGE
                     REARAAQALGQVGLKGFERTWPRELSGGMKMRVSIARALVTEPKLLLMDEPFAALDEI
                     TRHRLNADLLELWQRTAVTVVFVTHSVFESVFLSQRIALMTARPGRIASQLSITVPYP
                     RDAAFRTSAEYAAYCRQTSARLGDAMAA"
     gene            3284..4018
                     /locus_tag="VF991_01950"
     CDS             3284..4018
                     /locus_tag="VF991_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9555225.1"
                     /translation="MLGLWEGAVRAAAIPPYILPGPILVAKTLVADWGTLAPSLVVTV
                     EITVAALAAAVLVGGLLAVLFSLSRWVELSLFPYAIILQVTPIVAIAPLIIVWANDVD
                     LSLLICAWLVAFFPILSNTILGLRSVDANLLSLFELYGAGRWRTLIHLRLPAALPYFL
                     GGLRISGGLALIGAVVAEFVAGTGGQASGLAWRILESGYQLKIPRMFAALALVSATGI
                     AIFLLLSLLSHLLLRHWHESALAPER"
     gene            complement(4026..4781)
                     /locus_tag="VF991_01955"
     CDS             complement(4026..4781)
                     /locus_tag="VF991_01955"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9555226.1"
                     /translation="MRIPAPGATMVATVMRPPGEDRRPLVVINHGSPADGSQRLTMAR
                     PRYPVLTSWFVERGYVVVLPQRRGYGQTGGSWAETYDSCESPDYYGAGLESASDIEAA
                     IAFMHNQPFVAADRTIVVGESAGGWATIALSSLNPRGVAGMVNFAGGRGGQQTLPSGD
                     IGNCAPDALVKAAARYGATARVPMLWIYTKNDSFFAPALARRMVDAYDAAGGHASLHA
                     LAAFGSDGHMLVSSNSGVAMWSRALANFLGGLK"
     gene            5002..>5599
                     /locus_tag="VF991_01960"
     CDS             5002..>5599
                     /locus_tag="VF991_01960"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9555227.1"
                     /translation="MSESGSEPTVAIREDLRGALPAGVRLRGYEILAVLGHGGFGVTY
                     RARDTTLGRDVAIKEYLPTSVAVREDGTTVLPRSTALAEEFHWGRDRFLEEARILARL
                     DGAPAIVRVFDFLEANGTAYMVMALLDGEPLEQRLKRDGPLSQPAVESILYPLLDGLE
                     AVHATGFLHRDIKPDNIMLDARGAPTLIDFGASRAAMAG"
BASE COUNT          829 a         1889 c         1878 g         1003 t
ORIGIN      
        1 cctagctttt ctttgctccc agccatgagc aggattacgc cgcctttgcc agatccggca
       61 ccgctgcggc cttgtcgcgt ggcggcacgc cgatggcggc gcgctcatag accgctttga
      121 tctcggcgct gcggcggatc aggttgtagc gcagcccggt gtagaggttc accgggaacg
      181 gcatgtcggc gttgaagtcg atgatcagca ccacgcgggt ctcctcggtc tggttcttga
      241 cccagtgctc gcgcgtgtcg tcgaacacca gcggcacgcc ttcctcccag aagaagtggt
      301 ggccgccgat ctcgatccag catttctccg gctcggtcgg cacgatcagc ggataatgga
      361 agcggatcac gcccgccgcc gagccgcggt ggggctcgat ctcggcgccg cccgccagga
      421 tgctgaacag cgccgtgtgc acgcccggaa tgcgcgagat ggccgcgtag gtgtcgggca
      481 ctgcggcggt gttttccgtg atctcgtggc cccagatctt gagcaggaag gtgcgccagg
      541 cgcggcccgg cacgtagagg tcgcgcgggt ggacctcatg cagcgccggg atctcctcat
      601 ggtggctcag cagatactgc aagtcggcct tgatcttgtc gtggctcttc ttgagttcgc
      661 ccagcaccgg aaagatcttg agcgcgtcat cggcggccag cggcagcctg ggcatgcggc
      721 gcaggatgat gtccgacatc ttgaggttga gattctcgat cggctcctgc ggcagccaga
      781 tgttcttggt cagatagaaa cgacccttct gtccgatatt tgaagttgta tgtgtttcca
      841 tgacgcgtcc tgccgggatc cctctggtta ggggtgggaa tttcgtacca ccgtcgggcc
      901 gtttcaagcc ggtcatgcga ccggcaggcg cggcggacgg tctcaatttc ctacgtcaag
      961 cctcggaaaa catgtcacaa ttctacacct aggttactat agaccaagat gttccggttt
     1021 gccgatgttc cattgtcgct gtcggggatg accagaatcc ccgggcggcg cgtgtttttg
     1081 cgcgctccga ccatggacga ctgggccgaa tgggccgaac tgcgggcccg cagccgggcc
     1141 tttctcaccc cttgggaacc gacctggccc gaggattcgc tgggccgcga ccatttccgc
     1201 cgccggctgc gccagcaggc gcgcgaatgg cggtcgggcg aggcctatgg gctgttcgtc
     1261 ttcaccaacg agggcaggcg gctggcgggc ggcatcaacc tcagcaacgt ccgacgcggc
     1321 gtcgcccagg cggcatccgt gggctactgg atgggccagc cctatgccgg gcagggcctg
     1381 atgaccgacg ccttgcgcgc cgtcctgccc ttcgtcttcg acgagctcag gctgcaccgt
     1441 ctcgaggcgg cctgcttgcc gcacaacgag ccgtccaagg ccgtgctggc caaggtcggc
     1501 ttccacgagg agggcttggc gcgccagtac ctgcggatca acggccattg ggccgaccat
     1561 ctgctgttcg ccctgctgcg cgccgactac gatgtgctcc tgagagcggc ccgctgaagc
     1621 gggcgggagg cttttatgcg caatcttacc ccggccagca tcacccaggc cttcgccgac
     1681 tatgccaaga acgcgccgtc gcagcgcact cgcaccctgc tggtcagcct cgccggccat
     1741 ctccacagct tcgtgcgcga gaacaagctc acccaggcgg aatggacggc ggcgatcgat
     1801 gcgctgacgc gcgccacggc gttcaccgac gacaagcgca acgaatacat cctgttctcc
     1861 gacctgctgg gcgtctcctc gctggtcgac atggtgaatg ccgcgacatc cggcacgccg
     1921 tcgtcggtgc tgggcccgtt ccatatcgaa ggcgcgccgg agctcgccaa tggcggcgac
     1981 ctgtggcgcg gccaggtcgg cgacgcactg gtggtgagcg gcaaggtgac ggacgagaag
     2041 ggcgccccgg ccaagggcgc cgtgctggcg ctgtggcaga atgccggcaa cgggctttat
     2101 gcccagcagg acaaggacca gaagccgacc aactatcacg cgcgcctcac tgtggcggcc
     2161 gacggcagct tcgccttctc gacggtgcgt ccggtctcct acaccgtgcc cgacgacggg
     2221 ccggccggcg atatgctgcg cgtgctcggc cgcgaggcct ggcggccggc gcatctgcac
     2281 atgatcatcc atgcgcccgg ccacaagccg ctgatcaccg agttcttccc cgaggacgac
     2341 aagtatctcg accgcgacgc cgtgttcggc gtgcgcgccg gcctcgtcct gccgttccgc
     2401 cgcgtcgccg accgtgccca actgccggcc aatctggccg cgcgcgacaa gctgcccctg
     2461 ccggtgtgga cggccaagct cgatctcacc ttgccgccgg cctgatgcgg ctggtcggcg
     2521 ttcgcggcgt ctccaaggtc ttcgccaacg gtgtgcaggc gcttgccgac gtctcgctcg
     2581 acgtcgagat gtcggaattc gtgagcgttt tgggcccgtc gggctgcggc aagtccaccc
     2641 tgttgcagct gatcgccggg ctgatccagc ccagcgccgg caccatcgaa tggccgggca
     2701 gcaaggccga tatcggcttc gtcttccagg aaccgaccct gatgccgtgg gcgaccgcgc
     2761 ttgccaatgt cgtcctgccg ctcaggctgc gcggcatgga caagggcgag cgcgaggcgc
     2821 gggcggccca ggcgctgggt caggtcggac tgaaaggctt cgagcgcacc tggccgcgcg
     2881 aactgtcggg cggcatgaag atgcgcgtgt cgatcgcccg cgccctggtg accgaaccca
     2941 agctcctgct gatggacgag ccgttcgccg ccctcgacga gattacgcgg caccggctga
     3001 atgccgacct gctggagctg tggcagcgca cggccgtcac ggtggtgttc gtcacgcact
     3061 cggtgttcga atcggtgttc ctgtcgcagc gcatcgcgct catgacggcg cggccgggtc
     3121 ggatcgcctc gcagctttcg atcaccgtgc cctatccgcg cgacgcggcc ttccgcacct
     3181 cggccgagta cgccgcctat tgccggcaaa cgtcggcgcg gctcggcgat gccatggcgg
     3241 catgacggca aagctcatcg cgccggccgt tctcggcatt ctcatgctcg gtctgtggga
     3301 gggagccgtg cgcgccgcgg ccatcccgcc ctatatcctg ccgggcccga tcctggtggc
     3361 caaaacgctg gttgccgact ggggcacgct cgcgccctcg cttgtcgtca cggtcgagat
     3421 caccgtggcg gcgctggccg ccgccgtgct ggtcggcggg ctgctggcgg tgctgttctc
     3481 gctgtcgcgc tgggtcgagc tgtcgctctt cccctacgcc atcatcctgc aggtgacgcc
     3541 gatcgtggcg atcgcgccct tgatcatcgt gtgggccaac gacgtcgatc tttcgctgct
     3601 gatctgcgcc tggctggtag cgttctttcc catcctgtcc aacaccatcc tcgggctgcg
     3661 ctcggtcgat gccaaccttt tgagcctgtt cgagctctac ggggccgggc gctggcgcac
     3721 cttgatccat ctgcgcctgc ccgccgcact gccctatttc ctgggcggct tgcgcatctc
     3781 cggcggcctg gcgctgatcg gcgccgtggt cgcggagttc gtggccggca ccggcggcca
     3841 ggcttcgggg cttgcctggc gcatcctgga atcgggctat cagctgaaaa tcccgcgcat
     3901 gttcgccgcc ctcgcgttgg tgtcggcgac cggcatcgcg atcttcctgc tgctcagcct
     3961 gctcagccac ctgttgctgc ggcactggca cgaaagcgcg ctcgcgccgg agcgttgagg
     4021 cgcggctatt tgagaccgcc gagaaagttc gccagcgcgc gcgaccacat cgccacgccg
     4081 ctgttgctgg aaaccagcat atggccgtcg ctgccgaaag cggcgagggc gtgaaggctg
     4141 gcgtggccgc ccgcggcgtc gtaggcgtcg accatgcggc gcgccagcgc gggtgcgaag
     4201 aaactgtcgt tcttggtgta gatccagagc atgggcacgc gcgccgtcgc gccgtaccgg
     4261 gctgccgcct tcaccagggc atcgggcgcg caattgccga tgtcgccgct cggcagcgtc
     4321 tgctgtccgc cgcggccgcc ggcgaagttc accatccccg ccacgccgcg cggattgagg
     4381 ctcgatagcg caatcgtcgc ccagccgccc gccgactcgc cgaccacgat cgtgcgatcg
     4441 gcggcgacga agggctggtt gtgcatgaag gcaatggcgg cctcgatgtc cgacgcactt
     4501 tccagtcccg cgccatagta gtcgggcgat tcgcaagagt cgtaagtctc cgcccacgag
     4561 ccgccggtct ggccgtagcc gcggcgttgc ggcaggacga cgacataacc ccgctcgacg
     4621 aaccacgaag tcagcacggg atagcgcggc cgagccatgg tgaggcgctg cgagccatcg
     4681 gccggcgagc cgtgattgat gacgacgagc gggcgcctgt cctcgcccgg cggccgcatc
     4741 acggtggcga ccatcgtcgc ccccggcgcc ggaatgcgca cggtctcttc gcgctgtgca
     4801 gctagtgcgg tgccctgcga taccggcggc tgcgcggcgg tcgaccagga gacgaggcat
     4861 gcgagtccgg ctaggagcgg tggcttgagc gcaaggtaca tgatcgtcag caataccggg
     4921 cgtcgtagcg gtctgcaacc ttcagcggcc agcgaggccg ggttgttccc aacggcgtga
     4981 actccaaggt agaatgccgc agtgtccgag tccggatccg aaccgacggt tgcaatacgc
     5041 gaggatctgc ggggcgcact gcccgcgggt gtgcggctgc gcggctacga aatcctcgct
     5101 gtcctcgggc acggtggctt cggcgtcacc taccgggcgc gcgatacgac gctcggccga
     5161 gatgtcgcga tcaaggaata tctgccgacg tcggtcgcgg tccgcgaaga tggcaccacg
     5221 gtcctgccgc ggtcgaccgc tttggccgag gaattccatt gggggcgcga tcgcttcctc
     5281 gaggaggcgc gtatcctcgc caggctcgac ggcgcgccgg cgatcgtccg cgtcttcgat
     5341 tttctcgagg ccaacggcac cgcctacatg gtgatggcgt tgctggacgg tgagccgctc
     5401 gagcagcggc tcaagcgcga cgggccgctg tcgcagccgg ccgtcgaaag cattctctat
     5461 cccctgctcg acgggctcga ggcggtccat gcgacgggct tcctgcatcg cgacatcaag
     5521 ccggacaaca tcatgctcga tgccaggggt gctccgacgc tcatcgactt cggcgcttcg
     5581 cgcgcggcga tggctggcc
//
LOCUS       DASWGA010000087         7094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1652118, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000087 DASWGA010000000
VERSION     DASWGA010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7094
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1652118"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..1042
                     /locus_tag="VF991_01965"
     CDS             68..1042
                     /locus_tag="VF991_01965"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9555228.1"
                     /translation="MADVPDLHPPIPQRLLWRGDDLPAGAGRLALSAAVENELDRIVA
                     ALDRDPLPLLLLRPEDFTLDASRAFMREVKASLDDGPGFAIVDRLPVERWSQSGARAV
                     WWLLASLVARPVAQKWDGTSIYDVCDLGRPPGNGVRPDVTNAEQNFHTDNSYNYMPPR
                     YVGLMCLRTAMEGGVSAIVSFAAAHEEMRRRHPDLLPRLYRPFYFDRQREHAPGDVMT
                     TYHPMFEREDDRLTARLSLFQVKNGYRLAGVALDPEGAAALDAFEAILNAPDMAARFQ
                     FEPGQLQLIDNRALGHKRTAFRDWPEAERKRLLVRLWLRDHGSRAYNG"
     gene            complement(1085..2326)
                     /locus_tag="VF991_01970"
     CDS             complement(1085..2326)
                     /locus_tag="VF991_01970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555229.1"
                     /translation="MKSVGLWIAALVALAAGSAGVTQHSTPYATPVVEKPTDGDAGTF
                     DGLLDLAEASPSSIVKVLWTHGMCTHPPSWVDDRVKRLVAAVGGTAETKSLRAVGSRG
                     ASMRTERISTRGKTIEVMFLTWSPLTASYKAALAYDASATEGGKDQYARATLNRELKR
                     GLVNDCLTDVVVYGGPNGNDIRQAMNEAVCDALGGLFDGKNCNVLAGNWPAALALVTE
                     SLGSKLLFDAVLHIWNAAENSSDETAIDRLANSLAATRMMYMLSNQVPLLDVAGSVAI
                     DKTLEAASAPPRMRTSAGDVFSLLARARSLAPLVSAPMTVVAFSDPNDLLSYRIVPAH
                     LAEDLKEFRVINVLVSNDATYFGYLERPDTAHCGYPWNPHVFGMLARGYRAGKSLHSV
                     SGLLGGSCANYLWLAAPEAEK"
     gene            complement(2499..2966)
                     /locus_tag="VF991_01975"
     CDS             complement(2499..2966)
                     /locus_tag="VF991_01975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9555230.1"
                     /translation="METTALLKEFCSAVERRDGKAFANLFTEDGVYHDVFYGAFKGRE
                     KIAEMVDDWFHRTARDFRWQMFRPVSDGKTLYAYYTFSYVSTLPEAKGKRVGFDGVSI
                     MTLRDGKIAEYREVANSSLGLLEIGFAPERVAKILAKEGAHLKKQPEWQRHLA"
     gene            3045..3596
                     /locus_tag="VF991_01980"
     CDS             3045..3596
                     /locus_tag="VF991_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX9555231.1"
                     /translation="MTSWIVLGVIVLIALWAIAVYNGLVGGRNQSQTAWSQIDVQLKR
                     RHDLIPNLVQVVKDAMGYEQETLTKVVQARNAAVAASGPAQSGAAEAALTQATRGLFA
                     LVESYPQLKANDNVKQLQEELTTTENKIAFARQFYNDSVNAYNNRRQSFPAVLAAASL
                     GFGPIELFNMPDSEREVPKVALR"
     gene            3608..4570
                     /locus_tag="VF991_01985"
     CDS             3608..4570
                     /locus_tag="VF991_01985"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEX9555232.1"
                     /translation="MSATTDFVAAQKVNRRNTLLLLVVLTALAALTGYVIGWLIEGEV
                     VDTVPLWSQAGMVAAALMALVSVGWSMVSLAFGDSLVLTMASAKEIDKADAPQLYNVV
                     EEMAIAAGVPMPRVMVLETDALNAFATGNSVGHGTVVVTRGLIDTLNRDELQGVVAHE
                     MSHLANLDTRYMVTVGVTVGLIALVCDALLRAFGWGMFSDTRRSGDDKKGPGSGGLLI
                     VVLIVVAVFAPLAAKAVQMAVSRQREYLADATSVQFTRNPNGLISALGKLADKAAPFP
                     GVSRATQHLFIVNPVQTFTSDSPALLATHPDIADRIARLRNLGG"
     gene            4575..5480
                     /locus_tag="VF991_01990"
     CDS             4575..5480
                     /locus_tag="VF991_01990"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEX9555233.1"
                     /translation="MAAAAFDLQGHRGARGLSPENTLAAFRTALGLGVSTLETDLAVT
                     KDGVVVISHDPMLNPDLVRGPDGQWLGAPGPAIHALTLAELKRYDIGRINPASKYAQQ
                     FPGQKPADGERFPTLAELFAAAGPDVRFNIEIKTDPARPDDTPDPATFARLAIDAIRA
                     GKAAGRTTLQSFDWRALLEARRLAPDIPTSCLTIESNGMDTVGRASGRPSPWLGGFDL
                     AAQGGSVPRLAQQAGCAIWSPFWRNVTAENVKEAQALGLKVIAWTVNNPAEMARLIDL
                     GADGLITDYPDRALPVLAAKGLKIR"
     gene            5522..6193
                     /locus_tag="VF991_01995"
     CDS             5522..6193
                     /locus_tag="VF991_01995"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX9555234.1"
                     /translation="MRPFLPEPDLSERIHDAVLDAICSGELKSGARITQEELAQQFGV
                     SRQPVLQAMMLLRREGFLIDSGRKGVCVAPLDVQQARHLYVVRAALDGAAARLAAGHY
                     TPRLVERGRQLLDVGRRAVASGSIPSVIEADIDFHLFIYEASGNPLIGETAQPHWQHL
                     RRVMAAALSEGDLRVSVWDEHEGILRALEAGQASEAEALCRGHAEQMADILTGRLKAV
                     ISRAA"
     gene            6227..7027
                     /locus_tag="VF991_02000"
     CDS             6227..7027
                     /locus_tag="VF991_02000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX9555235.1"
                     /translation="MKLTPEQLKRFDEQGYLFFPNYFSPEETKILKASIPEVFAQRRE
                     ENVREKTGDVVRTAFAVHTYHPVFEALIHHPRFVEPAEQFLKDRTYIHQFKINGKAAF
                     DGDVWQWHQDYGTWKADDDMPEPRAMNLAVFVDEVNEFNGPLWFIPRSHKRGAIEAKH
                     DLTTTSYPLWVIDNDTIAKLVEQGGIVAPKGGPGSAIFFHGTLVHGSPPNMSPWDRQI
                     IYVTFNSVTNAIRRFKRPAYIAHRDFTPIDAWEDDAVMRAARRKQAAE"
BASE COUNT         1245 a         2430 c         2203 g         1216 t
ORIGIN      
        1 cacgcggtcc aagacctcga tcaacgaggt cttgcgcgac tgagccggac cggcgagcgt
       61 ggcggcgatg gccgacgtcc cggaccttca cccgcccatc ccccaacgcc tgctctggcg
      121 cggcgatgac ttgcccgccg gcgccgggcg gctggccctt tccgccgcag tcgagaacga
      181 actcgaccgc atcgtcgcgg cactcgatcg cgatcctctg ccgctgctgt tgttgcgccc
      241 ggaagatttt acgctcgacg cctcccgcgc cttcatgcgc gaggtgaagg cgagcctcga
      301 cgacgggccg ggctttgcca tcgtcgatcg cctgcctgtc gaacgctggt cgcagagcgg
      361 cgcacgggcc gtctggtggc ttttagcctc cctggtcgcg cggccggtgg cgcagaaatg
      421 ggacggcacg tcgatctacg acgtctgcga tctcggccgg ccgcccggca acggcgtgcg
      481 ccccgacgtc accaacgccg agcagaattt ccataccgac aatagttata actacatgcc
      541 gccccgctat gtcggcctga tgtgcctgcg cacggcgatg gaaggcggcg tgagcgccat
      601 cgtgagcttc gcggccgccc atgaggagat gcgccggcgc caccccgact tgctgccgcg
      661 gctctaccgg ccgttctatt tcgaccgcca gcgcgagcac gcgccgggcg acgtcatgac
      721 gacgtaccat ccgatgttcg aacgcgaaga cgaccgcctg accgcgcggc tgtcgctctt
      781 tcaggtgaag aacggttata ggctcgccgg ggtggcgctc gatcctgaag gcgccgccgc
      841 tctcgacgcc ttcgaagcga tcctcaatgc acctgatatg gccgcgcgct tccagttcga
      901 gccgggccag cttcaactga tcgacaatcg cgcgctcggc cacaagcgca cggcgttccg
      961 cgactggcct gaggcggagc gcaagcgcct gctggtccgc ctgtggctgc gcgaccacgg
     1021 cagccgcgcc tataacggct gaccgcgcat cgccctcgcc cggttccact ccgccgacac
     1081 gagatcactt ttcggcttcg ggagctgcga gccacagata gtttgcacaa gacccgccga
     1141 gcaagccgga gaccgaatgc aatgacttcc cggctcgata tcccctcgcc aacatgccga
     1201 atacatgggg gttccatggg tagccgcagt gagccgtatc gggacgttcg agatagccga
     1261 aataggtggc gtcgttcgat accagaacgt tgatgacgcg gaattccttc aagtcctcgg
     1321 caagatgtgc cggaactatt cggtagctca gtagatcgtt cggatctgag aacgcaacca
     1381 cggtcatcgg cgcactcaca agcggcgcca gactgcgcgc ccgagccagt aggctgaaca
     1441 cgtctccggc actggtccgc atccttggag gtgcggacgc cgcctccaaa gtcttgtcga
     1501 ttgccaccga accggccaca tcgagcaacg gcacctggtt ggacagcatg tacatcatcc
     1561 tcgtggcggc caagctgttc gccagccgat cgattgccgt ttcgtccgaa ctgttctccg
     1621 cggcattcca gatgtgcagg acggcatcga agagcagctt gctgcccagg ctctccgtga
     1681 caagcgccag cgccgcaggc caattgccag ccaagacatt gcagttcttg ccgtcaaaga
     1741 gaccgcccag agcgtcgcat accgcctcgt tcatagcttg gcgaatgtcg tttccgttag
     1801 gcccgccata gaccaccacg tcggtcaggc agtcgttgac cagcccgcgc ttcagctctc
     1861 ggttgagcgt tgcccgagca tactgatcct tgcccccctc ggtcgcagac gcgtcatagg
     1921 ccaaggctgc cttataagag gccgtcagcg gcgaccaggt caggaacatc acctcgatcg
     1981 tcttgccccg ggtcgagatt cgctccgtgc gcatcgacgc gccgcggctt ccgacggcgc
     2041 gcaggctctt tgtttcggca gttccgccga ctgctgctac gagccgcttc acgcggtcgt
     2101 cgacccagct tggcgggtgc gtgcacatgc cgtgggtcca cagcaccttg acaatggagg
     2161 agggcgaggc ctctgccaaa tccagcaagc catcgaatgt gcccgcatct ccatcagtcg
     2221 gcttttcgac aactggcgtg gcgtagggcg tcgagtgctg cgtgacgccg gcggacccgg
     2281 ccgccaaagc aactaaggcc gcgatccaca aaccaacgct cttcactggc tcctcccccg
     2341 agaaaccgca agcactaccg ccgcttgcat atgcaagcat acacctcgcg cgcctccaag
     2401 cgaatgcgcg gccgtcttca cgggccttta tgtcctcggt tatgcaattt gttggtgcgg
     2461 gccgtgcggc tacgtcaacg ccgccgcggc aggatcattc aggcgagatg gcgctgccac
     2521 tccggctgtt tcttgagatg cgcgccttcc ttggcgagga tcttggcgac acgctcgggc
     2581 gcgaagccga tctcgagcag gccgaggctc gagttggcga cctcgcgata ctcggcgatc
     2641 ttgccgtcgc gcaaggtcat gatcgacacg ccgtcgaagc cgacgcgctt gcccttggct
     2701 tccggcaagg tcgagacgta gctgaaggtg taataggcat agagcgtctt gccgtcgctg
     2761 accggccgga acatctgcca ccggaagtcg cgcgccgtgc ggtggaacca gtcgtccacc
     2821 atctcggcga ttttttcgcg gcccttgaaa gcgccataga acacgtcgtg atagacgccg
     2881 tcttcggtga acaggttggc gaaggccttg ccgtcgcggc gttcgacggc tgagcagaat
     2941 tccttcagca gggcagtcgt ttccatgatt aatcctcccg gaacgaccgc aatcatgact
     3001 aaactgccca aagcagcaag ggatgcggca agggggagcc tcgcatgact tcttggattg
     3061 ttttaggcgt catcgtcctg atcgcgctgt gggcgatcgc cgtctacaac ggcctggtcg
     3121 gcggccgcaa ccagtcgcag acggcgtgga gccagatcga cgtccagctc aagcgccggc
     3181 acgacctcat tcccaacctg gtgcaggtcg tgaaggacgc catgggctac gagcaggaga
     3241 cgctcaccaa ggtggtgcag gcgcgcaatg ccgccgtcgc cgcgtcgggc ccagcccagt
     3301 ctggcgcagc cgaggcggcc ctcacgcagg ccacgcgcgg tctttttgcc ctggtcgagt
     3361 cctatccgca gctcaaggcc aacgacaacg tcaagcaact gcaggaagag ctgaccacga
     3421 ccgagaacaa gatcgccttt gcccgccagt tctacaacga ctcggtcaat gcctataaca
     3481 accgccgcca gagcttcccg gcggtgctgg ccgcggcatc gctgggcttc gggccgatcg
     3541 agctcttcaa catgcccgac agcgagcgcg aagtgcccaa ggtcgccctg cgctgaccaa
     3601 cgcccgcatg agcgccacga ccgatttcgt cgccgcccag aaggtcaacc ggcgcaacac
     3661 gctcctgctg ctggtcgtcc tgacggcgct cgccgccttg accggctatg tgatcggctg
     3721 gctgatcgag ggcgaggttg tcgacaccgt gccgctgtgg agccaggcgg gtatggtggc
     3781 ggccgcgctg atggcgttgg tcagcgtcgg ctggagcatg gtctcgctcg ccttcggcga
     3841 ttcactggtg ctcaccatgg ccagcgccaa ggagatcgac aaggcggatg ccccgcagct
     3901 ctacaacgtg gtcgaggaga tggcgatcgc cgccggcgtg ccgatgccca gggtcatggt
     3961 gctggagacc gacgcgctca atgccttcgc caccggcaac agcgtcgggc acggcaccgt
     4021 cgtcgtcacc cgcggcctga tcgacacgct caatcgcgac gagctgcagg gcgtggtggc
     4081 gcacgagatg tcccatctcg ccaacctcga cacgcgctac atggtgacgg tcggcgtcac
     4141 ggtgggcctg atcgcgctgg tctgcgatgc cctgctgcgc gcgttcggtt ggggcatgtt
     4201 ctccgacacc cgccgcagcg gcgacgacaa gaagggtccc ggcagtggcg gcctgctgat
     4261 cgtcgtgctg atcgtcgtcg ccgtcttcgc gccactcgcc gccaaggccg tccagatggc
     4321 ggtgtcgcgc cagcgcgaat atcttgccga tgccacgtca gtgcagttca cgcgcaatcc
     4381 caacggcctg atctccgccc tcggcaagct cgccgacaag gcagcgccct ttcccggagt
     4441 gagtcgtgcc acgcagcatc tcttcatcgt caatccggtg cagaccttca ccagcgattc
     4501 gccggcgctg ctggccaccc atcccgacat tgccgaccgc atcgctcgcc tgcgcaatct
     4561 gggcggctag cctggtggcc gccgccgcct tcgatctcca aggccatcgc ggcgcgcgtg
     4621 ggctctcgcc ggagaacacg ctggcggcgt ttcgcaccgc tcttggtctc ggtgtgagca
     4681 cgctcgaaac cgatctcgcc gtcaccaagg acggcgtcgt ggtcatcagc cacgacccga
     4741 tgctcaaccc cgacctggtg cgcgggcccg acggacagtg gctgggcgcg cccggcccgg
     4801 cgatccacgc gcttaccttg gccgagctca agcgctacga catcgggcgg atcaatcctg
     4861 cgagcaaata cgcccagcaa tttccgggac agaagcccgc cgacggcgag cgctttccca
     4921 ccctcgcgga gctcttcgcc gcggcaggtc ccgacgtgcg tttcaacatc gagatcaaga
     4981 ccgatccggc gcggccggac gacacgcccg atcccgccac cttcgcccgc ctcgccatcg
     5041 acgccatccg cgccggcaag gccgctggcc gaacgaccct gcagtcgttc gattggcggg
     5101 cgctcttgga ggcgcggcgc ctcgcgcccg acatcccgac ctcctgcctc accatcgaaa
     5161 gcaacggcat ggatacggtc ggccgcgcca gcggacggcc gtcgccttgg cttggcgggt
     5221 tcgatctggc ggcccagggc gggtccgtgc cgcggctggc ccagcaagca gggtgcgcca
     5281 tctggtcgcc cttctggcgc aacgtgacgg cggaaaacgt caaggaagcc caggcgcttg
     5341 gcctaaaagt gatcgcgtgg acggtaaaca atccggccga gatggcccgg ctgatcgatc
     5401 tcggggccga cggcctgatc accgactatc cggaccgcgc attgccggtt ctcgccgcta
     5461 aagggctgaa aattcgctga gcgggttgac tctgcaggct ctgtgttctg tatacagaaa
     5521 catgcgccca ttcctgcctg aacccgacct ctccgaacgc atccacgacg ccgttctcga
     5581 cgccatctgc tcaggcgagc tgaaatcggg ggcccgcatc acccaggagg aactcgccca
     5641 gcagttcggc gtgtcgcgcc aaccggtgct gcaggcgatg atgctgctgc ggcgcgaggg
     5701 ctttttgatc gattccggcc gcaagggcgt ctgcgtggcg ccgctcgacg ttcagcaggc
     5761 gcgccacctc tatgtggtgc gggccgccct cgacggcgca gcggcgcggc tggcggcagg
     5821 gcactacacg ccccgcctcg tcgagcgcgg tcggcagctt ctcgatgtcg gccggcgggc
     5881 cgtggcgagc ggcagcatcc cgtcggtcat cgaagccgac atcgatttcc atctgttcat
     5941 ctacgaggcg tcgggcaatc cgctgatcgg cgaaaccgcc cagccgcact ggcagcatct
     6001 gcgccgcgtg atggccgccg ccttgagcga aggcgatttg cgcgtcagcg tctgggacga
     6061 gcacgaaggc attttacgcg cgctggaagc ggggcaggcc agcgaagccg aagcgctctg
     6121 ccgcggccat gccgagcaga tggccgacat tctcaccgga cgcctgaagg ccgtgatttc
     6181 ccgcgcggcc tgatcgccgc gccacgacaa gcaaggagga accgccatga agctcacccc
     6241 ggagcagctc aagcgattcg acgagcaggg ctacctgttc ttccccaact acttctcgcc
     6301 cgaagagacc aagatcctga aggcttcgat ccccgaggtg ttcgcccagc gccgcgagga
     6361 gaatgtacgc gagaagaccg gcgacgtggt gcgcaccgcc ttcgccgtgc acacctatca
     6421 tccggtgttc gaggcgctga tccatcatcc gcgcttcgtc gaaccggccg agcagttcct
     6481 caaggacagg acctacatcc accagttcaa gatcaacgga aaggccgcct tcgacggtga
     6541 cgtctggcag tggcaccagg actacggcac ctggaaggcc gacgacgaca tgcccgagcc
     6601 gcgcgccatg aacctcgcgg tgttcgtcga cgaggtgaac gagttcaacg gtccgctatg
     6661 gttcatcccg cgcagccaca agaggggcgc catcgaggcc aagcacgacc tcacgacgac
     6721 gtcctatccg ctgtgggtga tcgacaacga caccatcgcc aagctggtcg agcagggcgg
     6781 catcgtggcg cccaagggcg ggccgggctc ggcgatcttt ttccacggca cgctggtcca
     6841 tggcagcccg cccaacatgt cgccgtggga tcgccagatc atctacgtga ccttcaattc
     6901 cgtcaccaac gccatccgcc gtttcaagcg gccggcctac atcgcccatc gcgacttcac
     6961 gccgatcgac gcctgggagg acgacgccgt gatgcgcgcc gcccggcgca agcaggcggc
     7021 ggaatgactg gacgtgcaca agctattcga tacgctgtct gggctcggcc tcgcatacga
     7081 cgtagttggc gtct
//
LOCUS       DASWGA010000088         5893 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1150882, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000088 DASWGA010000000
VERSION     DASWGA010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5893
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1150882"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..620
                     /locus_tag="VF991_02005"
     CDS             156..620
                     /locus_tag="VF991_02005"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF025008.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9555236.1"
                     /translation="MSGSLMKRLAEARKTGDVARLAEAIPYARWMRIAPENGTGELLT
                     RMRFHDDLIGNTFLPAIHGGTLGAMLEMAAIFHLLWETETETVPKIVNITVDYLRSAR
                     PIDVIAAAKVTKQGRRMVNVFAEAWQDDRSKPVATANAHFLVISSDEAPPSL"
     gene            complement(625..1122)
                     /locus_tag="VF991_02010"
     CDS             complement(625..1122)
                     /locus_tag="VF991_02010"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9555237.1"
                     /translation="MSQDAQFTHAHMVRFERLLAASPEKVWGVLTDTRWLPGWYGAGG
                     IEPQVGGKVELMGGHIKGVVTQWNPPQRLAYTWNVFNPGDEVSPYPESYLTLSLAPAE
                     GGVALTLEHLPVLERFVKLNAMGWHTYLDMVAAAAREETVEARDAYMARNAKRYGIDL
                     AHPLA"
     gene            1159..1887
                     /locus_tag="VF991_02015"
     CDS             1159..1887
                     /locus_tag="VF991_02015"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX9555238.1"
                     /translation="MDYDSFKTERDDTVRDGAGFEAYRRPGDLIDSQHPKIAAYARRV
                     AGEGRDRERALRLYYAVRDDLRYDPYNTPMKREAYRASTTLAAGHGYCVNKAGLMAAV
                     CRAVGIPARVGYADVRNHMTTQRLSDLMGSDIFFYHGYTEVWLDGRWLKATPAFNKEL
                     TERFGLKPLEWDGVADSIYHPFDLGGRRHMEYLAYRGVFADIPFEEIRGAFRHYYPRM
                     TRQQEEMPLGGDFGAEGALEATRK"
     gene            1984..2901
                     /locus_tag="VF991_02020"
     CDS             1984..2901
                     /locus_tag="VF991_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555239.1"
                     /translation="MPNMLKDKVVLVTGAGGGIGREMALLAAKEGAKVVVNDLGGAVD
                     GEGGGSATPAQKVCDEIAAGGGKAVPNADSVTDPAGAERMVKAAVENFGKIDGVINNA
                     GILRDRIFHRMSHVDWKMVIDVHLNGAFNVSRAAANYFKEQKSGAFVHFTSTSGLVGN
                     FGQANYSAAKMGIVGLSRSIALDMAAFNVRSNCISPFAWTRMIGTIPADTEAQKARLE
                     RSKKMTPAKIAPMAVFLLSDAAEGITSQIFGVRMNEIMLFNANRPVRSVHNSEGWTLE
                     AIAEQAVPSMKPYFTDMKRSPEYFTWDPV"
     gene            2901..4043
                     /locus_tag="VF991_02025"
     CDS             2901..4043
                     /locus_tag="VF991_02025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007766579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HEX9555240.1"
                     /translation="MAELKNEPKIDPREVLEGIVEWVTIESPSHDAKAVNVVVDKVEG
                     QFRDLGLKLERIPGRDGFGDILECKTPWGEGKGILVLAHLDTVHPIGMIEKDLKIRQE
                     GDSVFGPGIYDMKAGGYIAYYALRHLIRQGKKTKLPVTFLFIPEEEVGSPTSRSRIEA
                     AARGHKYCLVMEPGRDGDKVVTSRKGVGRFVMTVKGRASHAGVRHEDGRSAILEMAKQ
                     ILRIEGRTDYNRGITVNVGLINGGTGVNVISAECTAEIDLRVPDQKIAEEMTHWFLNL
                     EPIGPDVEVRIEGGMNRPPYQKDTGIAQLFDKAQAIYREIGKDLKDVPLTGGGSDGNF
                     TAALGIPTLDGLGADGKGAHAAYEQIYYSSLLPRTYLCARLLETLD"
     gene            complement(4130..4744)
                     /locus_tag="VF991_02030"
     CDS             complement(4130..4744)
                     /locus_tag="VF991_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HEX9555241.1"
                     /translation="MTNIALIGATGNIGSRILDEALSRKHNVTAITRDPRKLSAREGM
                     TIRAGSTTDAPALVKILKGHDIVVVSVKWNENDIRRVIDTVRKSGVKRALFVVGAGSL
                     LRADGRTHFDFMAQKGVQPPTSLPALKAYDEIRKIDDLDWTAISPPASIPAGQRTGKF
                     RLGLDRLIQNAKGESRISREDFAIAIVDEIEKPKHVRKRFTAGY"
     gene            complement(4741..5640)
                     /locus_tag="VF991_02035"
     CDS             complement(4741..5640)
                     /locus_tag="VF991_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9555242.1"
                     /translation="MKSPSVRTDVLEIAYQEHGPSDGAPVILLHGFPYDVHAFDEVAA
                     PLAADGCRVLVPYLRGYGPTRFLSAATPRSGEQAALGHDLLQFMDALGIARAALAGYD
                     WGGRAACVVAALWAERVRCLASCTGYNIQNIAASGEPASAAQEHRLWYQYYFHTERGR
                     AGLTKNRRDICRLLWKLWSPEWRFDEATFGKSAVSFDNADFVDVVIQSYRHRYRYAPG
                     DPALTAVEARLALQPRITVPTINLHGGHDGISPVSEKDAQAKFFSGPYERRLLPGIGH
                     NVPQEAPAATVAALRDLMKGTSK"
     gene            5710..>5893
                     /locus_tag="VF991_02040"
     CDS             5710..>5893
                     /locus_tag="VF991_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HEX9555243.1"
                     /translation="MARYDRVVRGGMIVDGSRLPRFRGDIGIKDGRIAEIGHIAGSEA
                     DETIDAGGLIVAPGFVD"
BASE COUNT         1045 a         1884 c         1982 g          982 t
ORIGIN      
        1 acgcgctcgg tcgccttcac gcgcgccttc gcccatcagg gcgatcccaa ggatcccgtg
       61 gctgcggcgg cggggacctt catgctcggc accaagggca aggtcactcg cgcgcaagcc
      121 atcggaaaag aggcgatcgg caaggaaacg gcgcgatgag cggcagcctg atgaagcgcc
      181 tcgccgaagc gcgcaagacc ggtgacgtcg cgcggctcgc cgaggcgatc ccctatgcgc
      241 gctggatgcg gatcgcgccg gagaacggca ccggcgagtt gttgacccgc atgcgctttc
      301 acgacgacct gatcggcaac accttcctgc cggcgatcca tggcggcacg ctgggcgcca
      361 tgctggagat ggcggcgatc ttccatctct tgtgggagac cgagaccgag acggtgccca
      421 agatcgtcaa catcaccgtc gactacctgc gctcggcgcg gccaatcgac gtcatcgccg
      481 cggccaaggt gaccaagcag ggcaggcgca tggtcaatgt cttcgccgag gcctggcagg
      541 acgaccggtc caagccggtc gccacggcca atgcgcattt cctggtgata tcgtccgacg
      601 aggcgccgcc gtcgctatag ggcgtcaagc cagcggatgg gcgaggtcga tgccgtagcg
      661 cttggcgttt ctcgccatgt aggcgtcgcg cgcttccact gtctcttcgc gcgccgccgc
      721 ggccaccatg tcgaggtagg tgtgccagcc catggcgttc agcttcacga agcgttcgag
      781 cacgggcagg tgctcgagcg tcagcgcgac gccgccttcc gccggtgcga ggctcagcgt
      841 caggtaggac tcgggatagg gtgacacctc atcgcccgga ttgaacacgt tccaggtgta
      901 ggccagacgc tgcggcgggt tccactgcgt gaccacgccc ttgatgtggc cgcccatcaa
      961 ctcgaccttg ccgccgacct gcggctcgat gccgccggcg ccgtaccagc cgggcagcca
     1021 cctggtgtcg gtcagcaccc cccagacctt ctccggcgat gccgccagca ggcgttcgaa
     1081 gcgcaccata tgcgcatgcg tgaattgcgc gtcctggctc atgtattttt ccggctgatg
     1141 cagtaaagaa cgccccgcat ggattatgat tccttcaaga ccgagcgtga cgacacggtg
     1201 cgcgacggcg ccggctttga ggcctatcgc cggccgggcg acctgatcga ttcacagcac
     1261 cccaaaatcg cggcctatgc aaggcgggtg gcgggcgagg gccgtgaccg cgagcgggcg
     1321 ttgcgccttt attacgccgt gcgcgacgac ctgcgctacg acccctacaa cacgccgatg
     1381 aagcgcgagg cctatcgcgc cagcaccacg ctggctgcgg gacacggtta ttgcgtgaac
     1441 aaggcgggtc tgatggcggc ggtctgccgc gccgtcggca tcccggcccg tgtcggctac
     1501 gccgacgtgc gcaaccacat gaccacccag cggctctccg atctgatggg cagcgatatc
     1561 ttcttctatc acggctacac cgaagtctgg ctcgacggac gctggctgaa ggcgacaccc
     1621 gccttcaaca aggagctgac cgagcgcttt ggcctaaaac ccctggaatg ggacggcgtg
     1681 gccgattcga tctaccaccc gttcgatctc ggcgggcggc gtcacatgga gtacctcgcc
     1741 tatcgcgggg tctttgccga catcccgttc gaggaaatcc gcggcgcctt ccgtcactac
     1801 tatccccgca tgacgcggca acaggaggag atgccgcttg gcggcgattt cggcgcagaa
     1861 ggtgcgttgg aggcgaccag gaagtgagtc tcgttctgcg ttgctcacgg tgctgagcgc
     1921 acggctgttg cgccccaggc cgcggacccc gaaactgaat ccataaagga gagggaacag
     1981 gaaatgccca atatgctgaa ggacaaggtc gtgctggtca ccggtgccgg cggcggcatc
     2041 ggccgtgaga tggcgctgct ggcggccaag gaaggcgcca aggtggtggt gaacgacctc
     2101 ggcggcgcgg tcgacggcga gggtggcggc agcgccacgc cggcgcagaa agtctgcgac
     2161 gagatcgcgg cgggcggtgg caaggcggtg cccaacgccg acagcgtgac cgatccggcc
     2221 ggtgccgagc gcatggtcaa ggccgcggtc gagaatttcg gcaagatcga cggcgtcatc
     2281 aacaatgcgg gcatcctgcg cgaccgcatc ttccaccgca tgagccacgt cgattggaag
     2341 atggtgatcg acgtccattt gaacggcgcg ttcaatgtca gccgcgccgc cgccaactac
     2401 ttcaaggagc agaagtcggg cgccttcgtg cacttcacct cgacctcggg cctggtcggc
     2461 aatttcggcc aagccaacta ctcggcggcc aagatgggca tcgtcggcct gtcgcgctcg
     2521 attgcgctcg acatggcggc gttcaacgtg cgctccaact gcatttcgcc cttcgcctgg
     2581 acgcgtatga tcggcaccat tcccgccgac accgaggcgc agaaggcccg cctcgaacgt
     2641 tccaagaaga tgacgccggc caagatcgcg ccgatggcgg tattcctgct gtccgacgcc
     2701 gccgagggca tcacctcgca gatcttcggc gtgcgcatga acgagatcat gctgttcaac
     2761 gccaaccgtc cggtgcgctc ggtgcacaat tcggagggct ggacgctcga ggcgatcgcc
     2821 gagcaggcgg tgccgtcgat gaaaccctac ttcaccgaca tgaagcgctc gcccgagtac
     2881 ttcacctggg atcccgtctg atggctgaac tgaaaaacga accgaagatc gatcccaggg
     2941 aggtcctcga aggcatcgtc gaatgggtga ccatcgaaag ccccagtcac gatgccaagg
     3001 cggtcaatgt cgtggtcgac aaggtcgagg gccagttccg cgatcttggc ctgaaactcg
     3061 agcggatccc cggccgcgac gggttcggcg acattctgga atgcaagacg ccgtggggcg
     3121 agggcaaggg catcctggtg ctggcgcacc tcgacaccgt ccatccgatc ggcatgatcg
     3181 aaaaggatct gaaaatccgc caggagggcg acagcgtctt cgggccgggc atctatgaca
     3241 tgaaggcggg cggctatatc gcctactacg cgctgcgcca cctgatccgg caaggcaaga
     3301 agaccaagct gcccgtcacc tttctgttca ttcccgagga agaggtcggc agcccgacct
     3361 cgcgctcgcg catcgaagcg gcggcccggg gacacaagta ttgtctggtg atggaacccg
     3421 gtcgcgacgg cgacaaggtc gtgacgtcgc gcaagggcgt cgggcgcttc gtgatgacgg
     3481 tcaagggccg cgcctcgcac gccggcgtcc gccatgagga cggccgcagc gccatcctcg
     3541 agatggccaa gcagatcctg cgcatcgagg gcaggacgga ctacaatcgc ggcatcacgg
     3601 tcaatgtcgg actgatcaat ggcggcacgg gcgtgaacgt gatctcggcc gaatgcaccg
     3661 ccgagatcga cctgcgcgtg cccgaccaga agatcgccga ggagatgacg cactggtttc
     3721 tgaacctcga gccgatcggt ccggacgtcg aggtccgtat cgaaggcggc atgaaccggc
     3781 cgccctacca aaaggacacc ggcatcgccc agctgttcga caaggctcag gcgatctacc
     3841 gcgagatcgg caaggacttg aaagacgtgc cgctgaccgg cggcggcagc gacggcaatt
     3901 tcaccgccgc gctcggcatc cccacgctcg acgggctggg tgccgacggc aagggcgccc
     3961 atgcggccta cgagcagatc tattactctt cgctgttgcc gcgcacctac ctctgcgcgc
     4021 gattgctgga gacgctggac tagtctgtca tcctgagcgt aagcgaagga tctcatcgcc
     4081 gcttgccacg ggcatgagat ccttcggcgc gctcaggatg acagtgggtt tagtagcccg
     4141 ccgtaaaccg cttgcgcacg tgcttgggtt tctcgatctc gtcgacgatg gcgatggcga
     4201 aatcctcgcg gctgatgcgg ctctcgcctt tggcattctg gatcaggcgg tcgaggccca
     4261 gtcggaactt gccggtgcgc tggccggccg gaatcgaggc gggcggcgag atcgccgtcc
     4321 agtcgaggtc gtcgatcttg cggatctcgt cgtaggcttt taacgccggc agcgacgtcg
     4381 gcggctgcac acccttctga gccatgaagt cgaaatgggt gcgcccgtcg gcgcgcagca
     4441 ggctgccggc gccgaccacg aacagcgcgc gcttcacacc cgatttgcgg accgtgtcga
     4501 tcacgcgacg aatgtcgttc tcgttccatt tcaccgagac gacgacgatg tcgtggccct
     4561 tcaggatctt caccagcgcg ggcgcatccg tcgtgctgcc ggcgcggatg gtcatgccct
     4621 cgcgcgccga cagcttgcgc ggatcgcgcg tgatggcggt cacgttgtgc ttgcgcgaca
     4681 gcgcctcgtc gagaatgcgg ctgccgatgt tgccggtggc gccgatcagg gcgatgttgg
     4741 tcacttgctg gttcctttca tgagatcgcg tagtgcggcg accgtggcgg ccggcgcctc
     4801 ctgcggcacg ttatggccga tcccgggcag caaacgccgc tcgtagggtc cactgaagaa
     4861 cttggcctgg gcatccttct cggagaccgg gctgatgccg tcatggccgc catgcaggtt
     4921 gatggtcggc accgtgatcc tgggctggag cgcgagccgg gcctcgacgg cggtgagagc
     4981 gggatcgccg ggcgcgtagc ggtagcggtg acgataggac tggatcacga catcgacgaa
     5041 gtcggcgttg tcgaacgaga cggcgctttt gccgaaggtc gcctcgtcga accgccattc
     5101 cggcgaccac agcttccaca acaaccggca gatgtcgcga cggttcttgg tcagcccggc
     5161 gcgcccgcgc tcggtgtgga aatagtattg gtaccagagg cgatgctcct gcgcggcgga
     5221 cgcaggctcc cccgacgcgg cgatgttttg gatgttgtag ccggtgcagc tcgccaggca
     5281 gcgcacccgc tcggcccaca gtgccgccac gacgcaggcg gcgcggccgc cccagtcgta
     5341 gccggccagg gcggcgcgcg cgatgccgag cgcgtccatg aattgcagca ggtcgtggcc
     5401 aagggcggcc tgctcgcccg agcgcggcgt tgcggccgac aggaagcggg tcgggccgta
     5461 gccgcgcagg taaggcacca acacgcggca gccgtcggcc gccagcggcg cggcgacctc
     5521 gtcgaaggcg tggacgtcgt agggaaagcc atgcagcagg attaccgggg cgccatctga
     5581 gggcccgtgc tcctggtagg cgatctccag cacgtcggtg cggacgcttg gcgatttcat
     5641 ggtgcgagtt tagcgcggcg cgttgacaga gtcgtgggcc acgctcaggc ttggcggaac
     5701 ggaggaagca tggcccgata cgatcgcgtg gtccgcggcg gcatgatcgt cgacggcagc
     5761 cggttgcccc gttttcgcgg cgatatcggc atcaaggacg gccggatcgc cgagataggc
     5821 catatcgccg gcagcgaggc cgacgagacg atcgatgccg gcggcctgat cgtggcgccg
     5881 ggcttcgtcg atc
//
LOCUS       DASWGA010000089         2567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2287605, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000089 DASWGA010000000
VERSION     DASWGA010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2287605"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..333)
                     /locus_tag="VF991_02045"
     CDS             complement(<1..333)
                     /locus_tag="VF991_02045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9555244.1"
                     /translation="MTAMPKFTRRSFLISSAAIGGGLALGLRLPPFGPAVVRAADGSP
                     EITVWVVIRPDNSTAIRVVRSEMGQGTITGLAQLIAEELDCDWNKVEIEYPTPGQSVA
                     RKRAWGDYS"
     gene            complement(343..792)
                     /locus_tag="VF991_02050"
     CDS             complement(343..792)
                     /locus_tag="VF991_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9555245.1"
                     /translation="MRLTINGKSHEVDVDPTTPLLWVIREQVGLTGTKYGCGVAQCGA
                     CTVHVNGLPMRSCQVPVSAVGDSKITTIEGLASGKVLHKVQKAWLDHDVPQCGYCQSG
                     MIMAVAALLKAKPKPTDADIDASITNICRCGTFQQVREAIHAAAKAA"
     gene            951..>2567
                     /locus_tag="VF991_02055"
     CDS             951..>2567
                     /locus_tag="VF991_02055"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX9555246.1"
                     /translation="MRQGAPKFVRVEHAALAGAFALALAAAAFAAEYQMTVNRDRLVN
                     AQNEPQNWLLMNGDYGATRYSKLTQFNRDNVKNLRLVWAIALGGMQDVGQNGPENEVN
                     PLIDNGFMYTTDGWGTVYKIDARNPNKGEFVWVADPGVKHQGNVPRTRGIALWEDLVI
                     ANLPDGRVIAINRDSGEIVWDKMVAGKTEFGRQEKFLTAPLVADGKVIVQNGAGDGGT
                     RGWVAALEVRTGKELWRWYVVPKPGDPGSETWKDDHNAWKTGGGGIWQTGSYDPATKL
                     YIVGTGNPFPIYDPQARPGDNLYTDSAVALNVDTGKPAWHFQYTPNDSWDYDEVGVHM
                     LYDATVNGEQRKIVGHFGRNGFYYTLDRTNGKFIKADQYVNDLNWTKGINPKTGRPLD
                     YDAKLDVQIYNPIARALRGDGKKRACPTWHGGVAHQPTAYHPVKKIAYGVGIEGCFTQ
                     NGAAVVFKSKDGDVDVKASEKRDYSSDLYYGSVTAFDTAGHRVLAKAITDIEIRSGAI
                     VTAGGLVFTALQDGWVIAYHDETLEELWRFN"
BASE COUNT          484 a          825 c          862 g          396 t
ORIGIN      
        1 ggagtagtcg ccccaggcgc gcttgcgcgc cacgctctgg cccggggtcg gatactcgat
       61 ctcgaccttg ttccagtcgc agtcgagctc ctcggctatg agctgcgcga ggccggtgat
      121 cgtgccctgg cccatctcgg agcgcacgac ccggatggcg gtgctgttgt ccgggcggat
      181 caccacccag acggtgattt cgggcgagcc gtcggccgcg cgcaccacgg cgggaccgaa
      241 ggggggaagg cgcagtccga gagcgagtcc gccgccgatg gcggcgctgc tgatgaggaa
      301 gctacggcgg gtgaatttcg gcatggctgt catggctccc ccttacgcgg ccttggcggc
      361 ggcgtggatc gcttcgcgca cctgctggaa ggtgccgcag cggcagatat tggtgatgct
      421 ggcgtcgatg tcggcgtcgg tcggcttggg cttcgccttg agcagcgccg ccaccgccat
      481 gatcattccg gactggcagt agccgcattg cggcacgtcg tgatcgagcc acgccttctg
      541 caccttgtgc aagaccttgc ccgaggcgag gccttcgatc gtggtgatct tgctgtcgcc
      601 cacggcgctc acgggcacct ggcacgagcg catcgggagg ccgttcacgt gcacggtaca
      661 ggcgccgcac tgggcgacgc cgcagccgta cttggtgccg gtgaggccga cctgctcgcg
      721 gatcacccac aacagaggcg tcgtcggatc gacgtcgacc tcgtgagact tgccgttgat
      781 tgtcaggcgc attgcgttct ctccagatga gcatgtggcc gagaggcttc atcggcgccg
      841 gccacgcgcg ggcgccgtaa gcgcaaattc tactagcccg catggcactt gcaagcatgg
      901 cggcggcttg cgcgctaaac tggcatggcc accaacgggg ggaggccacc atgcgacagg
      961 gcgcgccgaa attcgtcagg gtcgaacacg cagctctggc gggcgcattt gcccttgcgc
     1021 tcgccgcggc ggcattcgcc gccgagtacc agatgacggt caacagggac cggctggtca
     1081 atgcgcagaa cgagccgcag aactggctgc tgatgaacgg cgattacggc gccacgcgct
     1141 attcgaagct cacccagttc aaccgcgaca acgtcaagaa cctccggctc gtctgggcga
     1201 tcgcgctggg cgggatgcag gacgtcgggc agaacggccc ggaaaacgag gtcaatccgc
     1261 tgatcgacaa cggtttcatg tacacgaccg acggctgggg caccgtctac aagatcgacg
     1321 cgcgcaatcc caacaagggc gagttcgtct gggtcgccga tcctggcgtc aagcaccagg
     1381 gcaacgttcc gcgcacgcgc ggcatcgcgc tctgggaaga cctcgtgatc gccaacctgc
     1441 cggacggccg ggtcatcgcg atcaaccgcg acagcggcga gatcgtgtgg gacaagatgg
     1501 tcgccggcaa gaccgagttc ggcaggcagg aaaaattcct gaccgcgccg ctggtcgccg
     1561 acggcaaggt catcgtgcag aacggcgcgg gcgacggtgg aacgcgcggc tgggtggcgg
     1621 cgctcgaagt caggacgggc aaggaattat ggcgctggta cgtcgtgccc aagcccggcg
     1681 acccgggcag cgaaacctgg aaagacgacc acaacgcctg gaaaaccggc ggcggcggca
     1741 tctggcaaac cgggtcctac gacccggcga ccaagctcta catcgtcggc acgggcaacc
     1801 cgttcccgat ctacgatccg caggcgcggc cgggggacaa cctgtataca gattcggcgg
     1861 tggcgctcaa cgtcgacacc ggcaagcccg cctggcattt tcagtacacg ccgaacgatt
     1921 cctgggacta cgacgaggtc ggcgtccaca tgctctacga cgcgacggtc aacggcgagc
     1981 agcgcaagat cgtcggccat ttcgggcgca acggcttcta ttacacgctc gaccgcacca
     2041 acggcaaatt catcaaggcc gaccagtacg tgaacgacct caactggacc aaggggatca
     2101 atcccaagac cggccggccg ctcgattacg atgcgaagct cgacgtgcag atctacaacc
     2161 cgatcgcgcg ggcgctgcgc ggcgacggaa agaagcgcgc ctgcccgacc tggcacggcg
     2221 gcgtcgcgca ccagccgacg gcctaccatc ccgtgaagaa gatcgcctac ggagtcggta
     2281 tcgaaggctg cttcacgcag aacggggcgg ccgtcgtgtt caaatccaag gacggcgacg
     2341 tcgacgtgaa agcgagcgag aagcgcgact attcgagcga cctctactac ggctcggtca
     2401 ccgctttcga cacggccggc cacagggtcc tcgcgaaggc gatcaccgat atcgaaatcc
     2461 gctcgggcgc gatcgtcacg gccgggggcc tggtgttcac cgcgctgcag gacggctggg
     2521 tgatcgccta tcacgacgag acgctcgagg agctgtggcg gttcaac
//
LOCUS       DASWGA010000090         4640 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1275373, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000090 DASWGA010000000
VERSION     DASWGA010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4640
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1275373"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..150
                     /locus_tag="VF991_02060"
     CDS             <1..150
                     /locus_tag="VF991_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555247.1"
                     /translation="QGGRIAAMNQMIPLGRGGLPEEAAGSVYLFCSPDSDYVSGQCLV
                     VNGGL"
     gene            complement(163..459)
                     /locus_tag="VF991_02065"
     CDS             complement(163..459)
                     /locus_tag="VF991_02065"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX9555248.1"
                     /translation="MPVRFHHAAAAELIRARDWYEHARPGLGTAFASEADRIVSLIEQ
                     FPGRFPFHADNVRRASLRRFPFSIFFEDVDDVRHIWAVFHHRRDPSTIERRRTA"
     gene            complement(460..690)
                     /locus_tag="VF991_02070"
     CDS             complement(460..690)
                     /locus_tag="VF991_02070"
                     /inference="COORDINATES: protein motif:HMM:TIGR02574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module protein"
                     /protein_id="HEX9555249.1"
                     /translation="MGVNPADLAGLTVEEKLALISELWDSIESTAAIPPLSDEQSREL
                     ARRRAEGLADPAATIDWPSVRQELFKKSVDPS"
     gene            complement(743..1564)
                     /locus_tag="VF991_02075"
     CDS             complement(743..1564)
                     /locus_tag="VF991_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX9555250.1"
                     /translation="MTADQIRFDEPHTALQRLAAQFAGHAYDLHRHDTYAVGLTLWGA
                     QSFHYRGALQTSRGGQVMVIHPDEAHDGHAGVAQGFAYRMLYVDPAAVSAALDGASPP
                     FVPDVVAHDAVLADLLREAFADFPQALEPLAVDAVVERLAGRLAARSDDRPRARRSPT
                     AHRAIARAREFLAAEAHRTVASEELEKLTGLDRFALARHFRAATGTSPHRYQVGRRLA
                     RAQAMIAAGVALSETAVATGFADQSHLTRHFAARFGLTPGRWAALARRAAIRSGT"
     gene            1594..2022
                     /locus_tag="VF991_02080"
     CDS             1594..2022
                     /locus_tag="VF991_02080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2000 domain-containing protein"
                     /protein_id="HEX9555251.1"
                     /translation="MPDIGAMLYETKTALILRRDLALWQVANVAAFLAGGMAGTHGHL
                     KGEPYRDGSGRAYSALIREPVFVYGATLEELRRTHQRALSRELVPAIYIEPMFETAND
                     ADNRAAVAAAPPEALDFVGIGVHGPRKVIDKVVNGLKFLS"
     gene            complement(2019..3197)
                     /locus_tag="VF991_02085"
     CDS             complement(2019..3197)
                     /locus_tag="VF991_02085"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9555252.1"
                     /translation="MSILAGVDSTPAGWRVVFACFISALFAWGFGFYAHGIYLVELQK
                     ARGWSTGLISSVVTGHYVLGALLLPRIADAIGRFGPRAVFLAGLGVTGGALLLLPSVT
                     APWQLALLYALMAPGWNATSLAPIAATVGQWFDRKRGLALNLALSGATVAGLVVAPAL
                     LAAIPRLGFADAERLLVVIGLALAAASVALFVRRGPLSPKPAMVRQSRLAPLRHWHFW
                     SISAPFAFVLMSQVGFLTHLVPLISDRHDVDPGLAVAVNAVMALVGRVVLGFVIDRLE
                     PRRASALCFLVQVGAIAVLAYAEAPAVIYGACAIYGFSVGNNITLSPLIIQREYAPHD
                     FPTIVALSTAVVQILYAFGPGLLGILRDAFGSYGVPLAVCMALNLAATGVIMMRPRRL
                     "
     gene            complement(3211..3573)
                     /locus_tag="VF991_02090"
     CDS             complement(3211..3573)
                     /locus_tag="VF991_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9555253.1"
                     /translation="MSESPHLAVLRELNRNYVRSVDQADVRWFDQHLAPGFHNTNPDG
                     TLIDRAAFLAQIGRGSPVKDIREHDVKILLFGDLAVIKARTSYKKPDGSTGAGWYTDD
                     WQLQPEGWRCVSAHVSRS"
     gene            complement(3570..4346)
                     /locus_tag="VF991_02095"
     CDS             complement(3570..4346)
                     /locus_tag="VF991_02095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 domain-containing protein"
                     /protein_id="HEX9555254.1"
                     /translation="MTADFDLPRIVSREEWLDARKALLQKEKELLRHHDAVSAERRRL
                     PMVRIDKAYVFEGAHGTARLIDLFEGRRQLIVYHFMFEPDAEQGCPACSFQIDDLCDL
                     THMHARRTTFVLISRAPFARIKPFHQRMGWNVPWYSSHGSDFNYDFNVTQDEAVRPVE
                     YNYRTKQELLAKGEDYFTRGENSGLSVFLRDKESVFHTYSTYSRGCDLLGSAYSYLDL
                     TPFGRQEDWEQPSGRSDGLFMSWLRHRDRYDKETVQGETT"
     gene            complement(4360..>4640)
                     /locus_tag="VF991_02100"
     CDS             complement(4360..>4640)
                     /locus_tag="VF991_02100"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9555255.1"
                     /translation="TIRSDGTGAVQTEVGVYREIREPERLVFTHAWVRADGSLTPLTL
                     VTASFRERGAKTEVSFRQEDFATSAACLSHEAGWGVSLDQLVGYMARQ"
BASE COUNT          802 a         1498 c         1648 g          692 t
ORIGIN      
        1 cagggcggcc gcatcgccgc catgaaccag atgatcccgc tcggccgcgg cggcctgccg
       61 gaagaggcgg cgggttcggt ctatttgttc tgcagccccg acagcgacta tgtcagcggc
      121 cagtgcctgg tggtgaacgg cggcctgtga gccgctgctt gctcacgctg ttcgacgccg
      181 ttcgattgtc gaaggatcgc gacggtggtg aaataccgcc caaatgtgcc ggacgtcgtc
      241 cacgtcttca aagaagatcg agaacggaaa acgtcggagg gatgctctcc gcacattgtc
      301 ggcatgaaac gggaagcgac ccggaaactg ctcgatcaag gagacgatac ggtcggcttc
      361 cgacgcgaat gcggtgccca ggcctgggcg ggcgtgctca taccagtcgc gggcccttat
      421 aagttcggcc gcagcggcgt ggtgaaaacg gaccggcatt cagctcggat ctacggactt
      481 cttgaacagc tcttgtcgta cggagggcca atcgatcgtc gctgccggat ccgccaaccc
      541 ctcggcgcgg cgccgcgcca actcgcggct ctgttcgtcc gacaagggcg gtatggctgc
      601 cgtggactcg atgctgtccc aaagctctga aatgagagcc agcttttcct cgacggtaag
      661 gccggcaagg tcggcgggat tgacgcccat gaagtcctct ccagtcagtg aggagaaagc
      721 ctataccggt cttgcatcgt cgtcaggtac cggaacgtat tgcagcacgc cgcgccagcg
      781 ccgcccagcg gcctggtgtc agtccgaagc gggcggcgaa gtggcgggtg agatggctct
      841 ggtcggcgaa gccggtcgct accgccgttt ccgacagcgc cacgccggcg gcgatcatgg
      901 cctgcgcccg cgccagccga cggccgacct ggtagcggtg cggcgacgtt ccggtcgcgg
      961 cgcggaaatg gcgcgccagc gcgaagcgat cgagaccggt cagcttttcg agctcctcgg
     1021 acgccaccgt gcggtgcgct tcggcggcca agaattcgcg ggcgcgggcg atcgcgcggt
     1081 gcgccgtggg actgcgccgc gcccgcgggc ggtcatcgct gcgcgccgcc agccggccgg
     1141 ccaggcgttc gaccaccgcg tcgaccgcca gaggttccag cgcctgcggg aagtcggcga
     1201 aggcttcgcg caacaggtcg gccagcacgg cgtcatgggc gacgacgtcg ggcacgaagg
     1261 gcgggctggc gccgtcgagc gccgccgaca ccgcggccgg atcgacatag agcatgcggt
     1321 aggcaaagcc ctgggccacg ccggcatggc cgtcatgcgc ctcgtcggga tggatgacca
     1381 tgacctggcc gccgcggctg gtctgcagcg cgccgcgata atggaaggac tgcgcgcccc
     1441 acagggtgag gccgacagcg taggtatcgt ggcggtgcag atcgtaggcg tggccggcga
     1501 attgcgccgc caggcgctgc agcgcggtgt gcggctcgtc gaagcggatc tggtcggcgg
     1561 tcatgcacaa accttcaaga cgtcggcccc acaatgcccg atatcggcgc catgctctac
     1621 gagaccaaga ccgccttgat cctacgccgc gatctcgccc tgtggcaggt ggccaatgtc
     1681 gcggctttcc tggccggcgg catggccggc acgcacggtc atctgaaggg cgagccttat
     1741 cgcgacggct ccggccgggc ctatagcgcg ctgatccgcg agccggtgtt cgtctacggc
     1801 gccaccctcg aggaactgcg ccgcacccat cagcgggcgc tgtcgcgcga gctggtgccg
     1861 gcgatctaca tcgagcccat gttcgagacc gccaacgacg ccgacaaccg cgccgccgtg
     1921 gcggccgccc cgcccgaggc gctggatttc gtcggcatcg gcgtgcacgg cccgcgcaag
     1981 gtgatcgaca aggtggtgaa cgggctgaaa ttcctgagct agaggcggcg cggccgcatc
     2041 atgatcacgc cggtggcggc gaggttcagc gccatgcaga ccgccagcgg cacgccgtag
     2101 ctgccgaacg catcgcgcag gatgccgagc aggccgggcc cgaaggcgta gaggatctgc
     2161 accacggcgg tggacaaggc gacgatggtc gggaaatcgt gaggcgcata ctcgcgctgg
     2221 atgatcagcg gcgagagcgt gatgttgttg ccgaccgaga agccgtagat ggcacaggcc
     2281 ccgtagatca cggcgggcgc ctcggcatag gccagcacgg cgatggcgcc gacctgcacc
     2341 aggaagcaca gcgccgatgc gcggcgcggt tcgagccggt cgatgacgaa gcccagcacg
     2401 acgcggccca ccagcgccat caccgcattg actgcgacgg ccagcccggg atcgacatcg
     2461 tggcggtcgc tgatcaaggg cacgagatgg gtgaggaaac cgacctgcga catcagcacg
     2521 aaggcgaagg gcgcggagat gctccagaag tgccagtggc ggagcggcgc caggcggctc
     2581 tggcggacca tcgccggctt gggcgacagc ggtccgcggc gcacgaacag cgcgaccgat
     2641 gccgcggcca gcgccaggcc gataacgacc agcaaccgct cggcgtcggc gaagcccagc
     2701 cgcgggatgg cggcgagcag ggccggcgcc accaccaggc cggcgaccgt ggcgccgctc
     2761 agcgccaggt tcagcgccag gccgcgcttg cggtcgaacc actggccgac ggtggcggcg
     2821 atcggcgcca ggctggtggc gttccagccc ggcgccatca gcgcatagag cagcgcgagc
     2881 tgccagggtg cggtgaccga gggcagcagg agcagcgcgc cgccggtcac gccaagcccg
     2941 gcgaggaaca ccgcgcgcgg gccgaaccgg ccgatcgcgt cggcgatgcg cggcagcagc
     3001 agggcgccca gcacatagtg gccggtgacg accgaggaga tcaggccggt cgaccagccg
     3061 cgcgccttct gcagctcgac gaggtagatg ccgtgcgcat agaagccgaa gccccaggcg
     3121 aacagcgccg agatgaagca ggcgaagacg acccgccagc cggcgggcgt cgagtcgacg
     3181 cctgccagga tggacactga gtgagcgcgc tcaggaacgg ctgacgtgcg cggaaacgca
     3241 gcgccagccc tccggctgga gctgccagtc gtcggtgtac cagccggcgc cggtcgagcc
     3301 gtcgggcttc ttgtacgaag tgcgggcttt gatgacggcg aggtcgccga acaacaggat
     3361 cttcacgtcg tgctcgcgga tgtccttgac cggcgaacct cggccgatct gcgccaggaa
     3421 ggcggcacgg tcgatcaggg tgccgtcggg attggtgttg tggaagccag gtgcgagatg
     3481 ctggtcgaac cagcgcacgt cggcctggtc gactgagcgg acgtaattac ggttgagctc
     3541 gcgcaggacc gcgagatgcg gtgactcgct catgtcgtct ctccttgcac tgtttctttg
     3601 tcgtagcggt cgcgatggcg cagccacgac atgaacagcc cgtcgctgcg gcccgatggc
     3661 tgctcccaat cctcctggcg gccgaacggc gtcaggtcga ggtagctgta ggcgctgccc
     3721 aaaaggtcac agccgcgcga ataggtcgag taggtgtgga agaccgactc tttgtcgcgc
     3781 aggaagacgc tgagcccgga attctcgccg cgcgtaaaat agtcctcgcc cttggccagc
     3841 agctcctgct tggtgcggta gttgtattcg accggccgca ccgcttcgtc ctgcgtgacg
     3901 ttgaagtcgt aattgaagtc gctgccgtgc gaggaatacc acggcacgtt ccatcccatg
     3961 cgctggtgga acggttttat gcgggcgaat ggtgcgcgcg agatcaatac gaaagtggtg
     4021 cggcgcgcgt gcatatgcgt gaggtcgcac aggtcgtcga tctggaacga gcaggcgggg
     4081 cagccctgct cggcatcagg ctcgaacatg aaatgataga cgatgagctg gcgccgtccc
     4141 tcgaacaggt cgatcagacg cgccgtgccg tgcgctccct cgaagacgta ggccttgtcg
     4201 atccgcacca tcggcaggcg gcggcgttcg gcgctgaccg cgtcgtgatg gcgtaaaagc
     4261 tccttttcct tctgcagcag cgccttgcgc gcgtcgagcc actcctcgcg cgagacgatg
     4321 cggggaaggt cgaagtcggc ggtcatcggc gcctcccggt cactgccgcg ccatgtagcc
     4381 gacgagctgg tcgagcgaga cgccccagcc cgcctcgtgc gacaggcagg cggccgatgt
     4441 ggcgaagtcc tcctgcctga aactcacttc ggtcttggcg ccgcgctccc tgaagctcgc
     4501 cgtcaccagg gtgagaggcg tcaggctgcc gtcggcccgc acccaggcat gggtgaagac
     4561 caggcgctcg ggttcgcgga tctcgcggta gacgccgacc tcggtctgca ccgcgccggt
     4621 gccatcggac cggatggtca
//
LOCUS       DASWGA010000091        12454 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_898115, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000091 DASWGA010000000
VERSION     DASWGA010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 12454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12454
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_898115"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1068
                     /locus_tag="VF991_02105"
     CDS             <1..1068
                     /locus_tag="VF991_02105"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX9555256.1"
                     /translation="SHTPVDEYYDPVRYQREVSLLFRRHPIMVAFSGQLRKAGDFVVH
                     NDTGQPILVVRGTDGVLRAFLNVCRHRSASVELKPCGANKRAFVCPYHGWSYDLTGRL
                     VGITDGAAFGDVDRSRHSLRRLAVAEKYGLVWVVPTALAAGEEADLDIDLYLGPLQAD
                     LSGWDMAGWELHSSAPIRPRMNWKLVIDTFLELYHFRYLHPGSVYPLFLDNIATYERM
                     DRHIRLSAAKRSLTELEGQPKESWRILDHAIVLYQLFPNTVLAYTQDHCGVFTSFPVS
                     PDESVMHFSVLVSPQEKAKKPESYWQANVDLFATALSEDFGIGESIQRNFRSGANLEQ
                     TFGKFEKALGWYHREIDKAIA"
     gene            complement(1185..1712)
                     /locus_tag="VF991_02110"
     CDS             complement(1185..1712)
                     /locus_tag="VF991_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555257.1"
                     /translation="MKKFAACLVLALTAAAMSASAQTPTAKPAAATKPAAPAGEDRYI
                     GYYYPKPTSTETFESTMQTIAGAERAQRIQFVTVVSQGTIQSAYRVPYAVFAKGEKAD
                     RMIIVGMQQGELNTVYRMRALLANMTTMSRLSPFFQERTVAEDATFFDLLKLLGFREV
                     TVTDGEKVTHQVTIK"
     gene            complement(1744..2517)
                     /locus_tag="VF991_02115"
     CDS             complement(1744..2517)
                     /locus_tag="VF991_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555258.1"
                     /translation="MAYKGFDLGGKVSLITGGNGGIGFGMADALAEAGADICIWGTNP
                     TKNANAAEKLKKHGRKVHTQIVDVGDQKQVQTGFAETLKVMGHVDNCVANSGVSGRGK
                     GSILEMDYEEWRRVLRVNLDGVFFTFQAAARHMVERGRGGSLVAMASTAAIEGAARSS
                     HYGASKGGVTAMVRALAVELARYKITVNSILPGWIETEMTAPAFGNEKFAGNVMPRIP
                     ERRWGVGADFGPIAVYLASGATAYTTGRDFVIDGGYTLF"
     gene            complement(2671..3387)
                     /locus_tag="VF991_02120"
     CDS             complement(2671..3387)
                     /locus_tag="VF991_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEX9555259.1"
                     /translation="MIELRPFEKLAESKHGWLNASFHFSFAEYNDPKRVHWGALRVWN
                     NDRIAPNSGFPPHPHRDMEIVTYVIKGAITHQDHLGNQGRTEAGQIQVMSAGRGIQHA
                     EYNKESAETELFQIWILPNQQGVPARWATVQFPADARDGKLVPLASGRGHEGAIPLYA
                     DGALFAGTLKAGQSIRQKLDGRPAYLVPAKGKIEVLGGDGKPIVANARDGVAVVDQAE
                     IEIKAVEDAEIVLVETDKLN"
     gene            3540..4589
                     /locus_tag="VF991_02125"
     CDS             3540..4589
                     /locus_tag="VF991_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013897203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX9555260.1"
                     /translation="MQQPTANRDIIVVGASAGGVDALRTMVAGLPADLPAAVFVVLHV
                     GEASRLVPILDRTGPLPVASAASGEPFERGHVYVAPPGKHLLLHDDHMLLRRGPRENL
                     ARPAIDPLFRSAAATFASRVIGVVLSGALSDGTAGLRAIKRCGGVAVVQDPADATVLS
                     MPLNALRFVDVDHVAPAAGLAPLLGTLARQKAGPTPEIPLDIRLETAIAAQELADMRI
                     DDMLGKPSRFTCPECHGALWEIEDGKMLRYRCHVGHAFTADTVLTSQTDEIDQLLGTL
                     LRSHQERAALTRRMAEKERTDGRDLLAAQLERRAIDYEGDVQLVKGLLRNGEGERDMV
                     ANGSRRSSLPHDDNR"
     gene            4573..8181
                     /locus_tag="VF991_02130"
     CDS             4573..8181
                     /locus_tag="VF991_02130"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX9555261.1"
                     /translation="MTTTDKRTDEERTDQEGEHDPRPSRSIPVVGIGASAGGIGALEA
                     LLPLLKADSGTAFVIVQHLDPNHQSLLVSLLSRDTEIPVVEATDRMPIEPDHIYVIPR
                     NATLTMSADHLRLGPIAEHRGQRAPIDAFFISLAEAKGENAACVILSGTGSDGTVGLR
                     AIKEHGGLTIAQDGAEYDGMMRSAVRTGMVDFVLPIDEIPSKLDDYFQHLIEIDGRKG
                     PDGVRQETVGHLANICALLRLRTGHDFSGYKDKTVTRRVQRRMQVLQIDEVPDFIERL
                     RKEPQELDALLQDLLIGVTNFFRDPQAFEALEREVIPHLFEGKGPDDTVRVWVPGCST
                     GEEAYSIAMLLREHGPKDQAAPKLQIFASDIDEESLQLARVGRYPSTIVTDVPPARLE
                     RYFVREDGTYRIVSDLREICLFSAHNILRDAPYSKLDLIACRNLLIYLTPDLQNRLIP
                     LFHYALNDSGYLFLGTSENVTRHSRLFATVDKSHRIFKRRPQIERRLPEFPLTAPEGA
                     LRRVPPAHRTTVEHEPLQTMAERQLLDRYSPAYVVINADGELIHGSGRTGKYLELAPG
                     APRMDIFSMARTGLRADLRVGVHKAVSTGQVTIQKSIVVGTNGGRQTIDLVVQPMRAG
                     ASQEMLYLVVFQDVGGIRMASESESAGVEELESDNLRQLEMELRTTRERLQTTTEELE
                     SSNEELKSGNEELSSMNEELQSANEELETSKEELQSINEELQTVNAELNARVEELSRA
                     NSDIANLLESTQIATVFLDRNLAVKSFTPAAKDVFRLVESDTGRPITHVRARFRSDTV
                     QEDAERVLRTLSTIEHQVESNYNDARYMMRMMPYRTVDDVIGGVVITFVDITKISAAE
                     MRIGELTHDLRNRIQNLETLLNLLPVGILMFENNRIDQLRVNRYGAQLLGESGEAGET
                     SDGAGLRLVTGALRFFEGDRELELDQHPLQRVARSGEPTTGFEGKLARADGSRVDVLV
                     SATPLFDEAGNVRGAIAALLDISERKAAETHQQVLLYELQHRVKNILATIGALATRML
                     RDGGSFEDFSAAFLGRLRAMATTHDLLSRTNWAGADLRQLLETVMRGQSPAQGAVILE
                     GPDTLLTPNTASTLGMVFYELATNAAKYGALSEGRGRIEVSWRIVPAADGDRLSLDWR
                     EIDGPTPPASIAEGFGTGFIRRSVEYELQGTATMEPSPTGLRWVLEVPSKGNVQRA"
     gene            8209..8595
                     /locus_tag="VF991_02135"
     CDS             8209..8595
                     /locus_tag="VF991_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9555262.1"
                     /translation="MPPELRGLRILVVEDNFLMAESVRDLLDECGCETVGPAPRLEVA
                     LELASHELLDGALLDINLAGEYCFPVARLLRERGVPFMFLTGYDDCSIVSIVPVAFQD
                     APRLSKPFDRLEVAVTAARHFVPTPS"
     gene            8613..9053
                     /locus_tag="VF991_02140"
     CDS             8613..9053
                     /locus_tag="VF991_02140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9555263.1"
                     /translation="MTLPTHQQDRRPWHGGRILVAEDNYMLADVICDFLRDCGLTPVG
                     PAARLPEASRLARQRALDGAVLDLKLGERLCLPVCSILSARRIPFLFLTGYGDLSLIP
                     LEFRSVPLICKPFETDEMKSALAAMLDRSLSALAPGASPVARPN"
     gene            complement(9055..9531)
                     /locus_tag="VF991_02145"
     CDS             complement(9055..9531)
                     /locus_tag="VF991_02145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555264.1"
                     /translation="MELNEQGDPMVRGLIVPLSPNEEIALRRVAYGSADVAFRYAERL
                     MRLALVEDAADGLRLTSVGQQRIGLLTIGLSGDAVGAEQHRPHKPSIPAPPSRPIYVD
                     RREWMEQARLRLCRIREGLAIHRKRQDRLMARSFERIEDSQLRLRSATTRSPVNPR"
     gene            complement(9662..10951)
                     /locus_tag="VF991_02150"
     CDS             complement(9662..10951)
                     /locus_tag="VF991_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEX9555265.1"
                     /translation="MTHPSIRRHLLVGSAAALVLLGGVGGWATTTELSGAVIAPGQLV
                     VDSNVKKVQHPAGGVVGELRVKDGDRVKAGEVVVRLDETQARANWAIVTKAIDELEAR
                     QARGEAERDGADRISFPADLLARKDDPDVQRVTAGEQRLFEIRRGAREGQKAQLKEQI
                     AQLGQQIQGTAEQEAAKAKEIDWIKRELKGVRDLWKQSLVPFSRVTTLERDGARLEGE
                     RGALIATAAQARGRIAETELKILQIDEDLRTEVGKELADIRGKKSELVEKRVAAEDQL
                     KRIDLVAPQDGKVFQQSVHTVGGVIQAGESVMLIVPDGDSLAIEARIAPHEIDQVHMG
                     QRAVVRFTAFNQRTTPQLNGEIVRIGADVTQEEKKGESYYAVRIRIADDELARLDGLK
                     LVAGMPVEAFIQTTPRTVVSYLVKPLGDQIARAFKGR"
     gene            complement(10953..>12454)
                     /locus_tag="VF991_02155"
     CDS             complement(10953..>12454)
                     /locus_tag="VF991_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEX9555266.1"
                     /translation="FDIVRSRILVRVGGSLDEAVSERVHHVLMKLPLRGSASPGLQPL
                     RDLDQVRSFLGAGGPSALFDLPWMPLYLGICYLFHPWIGVAATAGGLILIAVTLLTEF
                     LTRAPAAEAATLAGNRTSLAEAGRRNAEAVQAMGMAGRLGARWRQSNRDYLAAHQRTA
                     DIAAGLGGLSKVLRMALQSGVLGIGAWLVINQQATAGIIIASSILTSRALAPIELAIA
                     HWRGFVAARQSWRRLDTLLGKVAADPPRLVLPKPVHSLAVETVSIVPPGTQRVVVQDM
                     AFQLKAGQGLGIIGPSASGKSSLARAIVGVWSAVRGKIRLDGAALDQWSSQALGPHIG
                     YLPQDMELFAGTVAENIARFEPQAPSEQVIAAAAAAGVHELILGLPEGYETQIGEAGA
                     ALSAGQRQRIGLARALYGEPFLVVLDEPNANLDHEGEEALARAILGVRARGGIAIVIA
                     HRPSALAGVDSLLVMRAGRLESFGPKETVLKQTLRPAPLRVAASAAGAA"
BASE COUNT         2049 a         4211 c         4050 g         2144 t
ORIGIN      
        1 agccacaccc cggtcgatga gtactacgac ccggtgcgct atcagcgcga agtttcgctg
       61 ctgttccggc ggcatccgat catggtcgcc ttctcgggcc agctgcgcaa agccggcgac
      121 ttcgtcgtgc acaacgacac cggccagccg atcctggtgg tgcgcggcac cgacggcgtc
      181 ctgcgcgcct tcctcaatgt ctgccgccat cgcagcgcca gcgtcgagct gaaaccgtgc
      241 ggcgccaaca agcgcgcctt cgtctgcccc tatcacggct ggagctacga tctcaccggt
      301 cggttggtcg gcatcaccga cggcgcggca ttcggtgatg tcgatcgcag ccggcacagc
      361 ctgcgccggc tcgccgtggc ggagaaatac ggtctggtgt gggtggtgcc gacggcattg
      421 gcggcgggcg aggaggccga cctcgacatc gacctctatc tcgggccgtt gcaggccgat
      481 ctttcaggct gggacatggc gggctgggag ctgcacagtt cggcgccgat ccggccgcgc
      541 atgaactgga agctggtgat cgacaccttc ctcgagctct accacttccg ctacctccat
      601 cccggcagcg tctatccgct gttcctcgac aatatcgcca cctacgagcg catggatcgc
      661 cacatccggc tgtcggccgc caagcgcagc ctgaccgagc tcgaaggcca gccgaaggaa
      721 agctggcgca tcctcgacca cgccatcgtg ctctatcagc tcttccccaa cacggtgctg
      781 gcctacaccc aggatcattg cggcgtgttc accagcttcc cggtctcgcc cgatgaatcg
      841 gtgatgcatt tctccgtgct ggtcagtccg caggagaagg ccaagaagcc ggaaagctac
      901 tggcaggcca atgtcgacct gttcgcgacc gcgctcagcg aggatttcgg catcggcgaa
      961 tcgatccagc gcaatttccg cagcggcgcc aacctcgaac agaccttcgg caagttcgag
     1021 aaggcgctgg gctggtacca ccgcgagatc gacaaggcga tcgcgtaagc gcgctgtgcg
     1081 tcgccccctc tcctagcctg tccccctagc gggggagagg aacatgagct ctcggactcc
     1141 tctcccccgc tagggggaca ggttgggtga gggggtcgcc gaaactactt gatcgtcacc
     1201 tgatgcgtga ccttctcgcc gtcggtgacg gtgacctcgc ggaagcccaa cagcttcaag
     1261 aggtcgaaga aggtcgcgtc ctcggccacc gtgcgctcct ggaagaacgg cgagaggcgc
     1321 gacatggtcg tcatgttggc gagcagcgcg cgcatgcgat agacggtgtt gagctcgccc
     1381 tgctgcatgc cgacgatgat catgcgatcg gccttctcgc ccttggcgaa caccgcgtag
     1441 ggcacgcgat aggccgactg gatcgtgccc tgggagacca cggtgacgaa ctggatacgc
     1501 tgggcccgct cggcgccggc gatcgtctgc atggtcgatt cgaaggtctc ggtcgaggtc
     1561 ggcttgggat agtagtagcc gatatagcgg tcctcgccgg cgggggcggc gggcttggtc
     1621 gctgcagccg gcttggcggt cggtgtctgc gccgacgccg acatggcggc tgccgtcagg
     1681 gcaaggacca ggcaggctgc gaacttcttc atcatttctc tctctccccg agattgcttc
     1741 ggactaaaat aaggtatagc cgccatcgat gacgaagtcg cgccccgttg tgtaggcggt
     1801 ggcgccactc gccaggtaga ccgcgatcgg tccgaaatcg gcgccgacgc cccaccgccg
     1861 ctcgggaatg cgcggcatca cgttgccggc gaatttctcg ttgccgaagg cgggggcggt
     1921 catttcggtc tcgatccagc ccggcaggat cgagttgacg gtgatcttgt agcgcgccag
     1981 ctcgacggcg agcgcgcgca ccatggcggt gacgccgccc ttgctggcgc cgtaatggct
     2041 cgagcgggcc gcgccctcga tcgccgcggt gctggccatc gccaccagcg agccgccccg
     2101 cccgcgctcg accatgtgcc gggcggcggc ctggaaggtg aagaacacgc cgtcgagatt
     2161 gaccctgagc acccggcgcc attcctcgta gtccatctcc aggatcgagc ccttgccgcg
     2221 acccgagacg cctgaattgg cgacgcaatt gtcgacatga cccatcactt tcagggtctc
     2281 tgcaaagccc gtctgaacct gcttctggtc gccgacatcg acgatctggg tatggacctt
     2341 acggccgtgc ttcttcagct tctcggcggc attggcgttc ttggtgggat tggtgcccca
     2401 gatacagatg tcagcgccgg cctcagccag cgcgtcggcc atgccgaagc cgatgccgcc
     2461 attgccgccg gtgatcagcg acaccttgcc gccgagatcg aagcctttgt aggccatggc
     2521 cgtccccctt catcactctc atattcctct cccccgctag ggggagaggt taggtgaggg
     2581 ggcatcgaac gctgtgtaca acccctcacc cagcctctcc cccctagcgg gggagaggag
     2641 gaagagggag catgagcacg aaacgctgcg tcagttcaac ttgtcggttt cgaccagcac
     2701 aatctcggcg tcttccaccg ccttgatctc gatctcagcc tggtcgacca cggccacgcc
     2761 atcgcgggcg ttggcgacga tcggctttcc gtcgccgccc aagacctcga tcttgccctt
     2821 ggccggcacc aggtaggcgg gtctgccgtc gagcttctgg cggatcgatt gacccgcctt
     2881 cagggtgccg gcgaacagcg cgccgtcggc atagagcgga atcgcgccct catgcccgcg
     2941 gcccgaggcc agcggcacca gcttgccgtc gcgcgcgtcg gcggggaatt gcacggtcgc
     3001 ccagcgcgcc ggcacgccct gctggttggg caggatccag atctggaaaa gctcggtctc
     3061 cgcactctcc ttgttgtact cggcgtgctg gatgccgcgg cccgcgctca tcacctggat
     3121 ctggccggcc tcggtgcggc cctggttgcc gagatggtcc tggtgcgtga tcgcgccttt
     3181 gatgacgtag gtcacgatct ccatgtcgcg gtggggatgc ggcgggaagc ccgagttggg
     3241 cgcaatgcgg tcgttgttcc acacgcgcaa cgccccccag tgcacacgct tgggatcgtt
     3301 gtactcggcg aagctgaaat ggaagctggc gttgagccag ccgtgcttgg actcggccaa
     3361 cttctcgaaa ggtctgagtt cgatcatggg attacctctt gatcgccaag atggtccgcc
     3421 gagcggcgcg atcaagtttc cgattggtaa cggcagaggt agcgcaaata agtcgtgcag
     3481 catgattgca acggttgcaa atcaccgtcg ttgccttacg ggcgggctgt gaggggccaa
     3541 tgcaacaacc aaccgccaac cgcgatatca tcgtcgttgg cgcatcggcg ggcggcgttg
     3601 acgctctgcg caccatggtg gccggccttc ctgccgacct gccggcggct gttttcgttg
     3661 tcctgcatgt cggcgaagcg agccgcctcg tgcctatact ggaccggacc ggtccgctac
     3721 cggtcgcgtc tgccgccagc ggcgaaccgt tcgagcgcgg ccacgtttat gtggcccctc
     3781 ccggcaagca tctgttgctg cacgacgacc acatgctgct gcgccgcggt ccgcgcgaga
     3841 acctcgcgcg accggccata gatccattgt tccgttcggc cgccgccacc tttgccagcc
     3901 gggtgatcgg cgtcgtgctg tccggcgcgc tgtccgacgg gacggctggc ctgcgggcga
     3961 tcaagcgctg cggcggtgtt gccgtggtgc aggatccggc ggatgccacg gttctctcca
     4021 tgccgcttaa cgcgttgcgc tttgtcgatg tcgatcatgt cgcgccggcg gccggcctgg
     4081 cgccgctgct cggcacgctg gctcgccaga aggcgggccc gacgcccgag attccgctcg
     4141 atatccggtt ggagacggcg atcgccgccc aggagctggc agatatgcga atcgacgaca
     4201 tgctcggcaa gccttcccgg ttcacctgcc ccgaatgtca tggcgcgctg tgggagatcg
     4261 aggacggcaa gatgctgcgc taccgctgcc acgtcggcca tgcttttacg gcggacaccg
     4321 ttctgacctc gcagaccgat gaaatcgacc agctcctcgg caccttgctg cgctcccatc
     4381 aggaacgcgc cgccctgacc cggcgcatgg ccgaaaagga gcggaccgac gggcgagact
     4441 tgcttgccgc ccagcttgag cgccgggcga tcgactacga gggcgacgtg cagctcgtga
     4501 aaggcctgct gcgcaatggc gagggggagc gggacatggt agctaacggc agccgcagga
     4561 gctcgctgcc gcatgacgac aaccgataag cgcaccgacg aggagcgcac cgaccaggaa
     4621 ggggagcacg acccgcgccc cagccggtcc attccggtcg tcggcatcgg cgcgtcggcc
     4681 ggcggcatcg gcgcgctcga ggccctgctg ccgctcctga aggccgacag cgggaccgcc
     4741 ttcgtgatcg tccagcacct cgatcccaac caccaaagcc tgctggtttc cctgctcagc
     4801 cgcgacaccg agatcccggt ggtcgaggca accgatcgga tgccgatcga gcccgaccac
     4861 atctacgtca ttccgcgcaa cgccaccctc accatgagcg ccgaccacct gcgtctcgga
     4921 ccgatcgccg agcaccgcgg acagcgtgcg ccgatcgacg ccttcttcat ttcgctcgcc
     4981 gaggccaagg gcgagaacgc ggcctgcgtc atcctttcgg gcaccggcag cgacggcacg
     5041 gtcggcctgc gcgccatcaa ggagcatggc gggctcacca tcgcgcagga cggcgccgag
     5101 tacgacggca tgatgcgaag cgcggtgcgc accggcatgg tcgatttcgt cctgccgatc
     5161 gacgagattc cgtccaagct cgacgattat ttccagcacc tgatcgagat cgacggccgc
     5221 aaggggccgg acggagtgcg ccaggaaacg gtcggccatc tggcaaatat ctgtgcgctc
     5281 ttgcgcctgc gcaccggtca tgatttcagc ggctacaagg acaagacggt gacgcgccgc
     5341 gtgcaacggc gcatgcaggt gctgcagatc gacgaggttc ccgacttcat cgagcgcctg
     5401 cgcaaggaac cgcaggagct cgatgcgctg ttacaggacc tgctgatcgg cgtcaccaac
     5461 ttcttccgcg acccgcaggc cttcgaggcg ctggaacgcg aggtcatccc gcacctgttc
     5521 gagggcaagg gccccgacga cacggtgcgc gtctgggtgc ccggctgctc gaccggcgag
     5581 gaggcctatt ccatcgccat gctgttgcgc gagcacggtc ccaaggacca ggccgcgccc
     5641 aagctgcaga tctttgccag cgacatcgac gaggagtcgc tgcagctcgc gcgcgtcggc
     5701 cgctacccgt cgaccatcgt caccgacgtg ccgccggcac ggctcgagcg ttatttcgtg
     5761 cgcgaggacg gcacctaccg gatcgtcagc gacctgcgcg agatctgcct gttctcggca
     5821 cacaacattc tacgcgatgc accgtattcg aagctcgacc tgatcgcctg ccgcaacctc
     5881 ttgatctacc tgacgcccga cctgcagaac cgcctgattc cgctgttcca ctacgcgctg
     5941 aacgattccg gctacctgtt cctcggcacg tcggagaacg tgacgcgcca ttcgcgtctg
     6001 ttcgccaccg tcgacaagtc gcaccgcatc ttcaagcggc gaccccagat cgagcggcgg
     6061 ctgcccgaat tccctttgac ggcgccagaa ggcgccttgc gcagggtgcc gccggcccac
     6121 cggaccacgg tcgagcacga gccgctgcag acgatggccg agcgccagct gctcgaccgc
     6181 tacagcccgg cctatgtcgt tatcaacgcc gatggcgagc tgattcacgg ttcgggccgg
     6241 accggtaaat atctcgagct ggcacccggc gcgccgcgca tggacatctt cagcatggcg
     6301 cgcacgggat tgcgggccga cctgcgcgtc ggcgtccaca aggcggtgag caccggtcag
     6361 gtcaccatcc agaagagcat cgtcgtcggc accaatggcg gccgccagac gatcgacctg
     6421 gtcgtccagc cgatgcgcgc tggggcctcg caggagatgc tctatctggt ggtcttccag
     6481 gatgtcggcg gcatcaggat ggcgtccgaa tccgagtcgg ccggcgtcga agagctggag
     6541 agcgacaacc tccggcagct cgagatggag ctcaggacga cgcgcgagcg cctgcagacg
     6601 accaccgagg agctcgaatc ctccaacgag gagttgaagt cgggcaacga ggaactcagc
     6661 tcgatgaacg aggagctgca gtcggccaac gaggagctgg aaacctccaa ggaggagctg
     6721 cagtcgatca acgaggagct gcagacggtc aacgccgagc tcaacgcgcg cgtcgaagag
     6781 ctgagccggg ccaattcgga tatcgccaat ctgctggaga gcacgcagat cgccaccgtg
     6841 ttcctcgacc gcaaccttgc ggtcaagagc ttcacgccgg ccgccaagga cgtcttccgc
     6901 ctggtcgaaa gcgacaccgg acggccgatc acccatgtcc gagcccgctt ccggtcggat
     6961 acggtgcagg aggatgccga gcgcgtgttg cgcacgcttt ccaccatcga gcaccaggtc
     7021 gaaagcaact acaacgatgc gcgctacatg atgcgcatga tgccctatcg caccgtcgac
     7081 gacgtgatcg gcggcgtggt catcaccttc gtcgacatca ccaagatatc cgccgccgag
     7141 atgcgcatcg gcgagctgac gcacgacctg cgcaaccgca tccagaacct cgagacgctg
     7201 ctcaatctcc tgccggtcgg catcctgatg ttcgagaaca accggatcga ccagctgcgg
     7261 gtcaaccgct acggcgcgca gctcctgggc gagagcggcg aggccggcga gacttccgac
     7321 ggtgcggggc tgcgtctggt cacgggggcg ctgcgatttt tcgagggcga tcgcgagctc
     7381 gagctcgacc agcacccgct gcagcgcgtg gcccggtcgg gcgaaccgac gaccggcttc
     7441 gaaggcaagc tggcgcgagc cgacggcagc cgggtcgacg tgctggtatc ggcgacgccg
     7501 ctgttcgacg aggcgggcaa tgtgcggggc gccatcgcgg ccctcctcga tatctcggag
     7561 cgcaaagccg ccgaaaccca ccagcaggtg ctgctctacg agctgcagca tcgcgtcaag
     7621 aacatcctgg cgaccatcgg cgcgctggcg acccgcatgt tgcgcgatgg cggctcgttc
     7681 gaggattttt ccgctgcctt cctcggacgg ctgagggcga tggcgacgac acacgatctg
     7741 ctgtcgcgga ccaactgggc cggcgccgat ctacggcaat tgctcgagac cgtcatgcgc
     7801 gggcagagcc cggcgcaagg cgccgtgatc ctagagggac ctgacaccct gttgacgccg
     7861 aacacggcat cgaccctggg catggtgttt tacgagctgg ccacgaacgc cgccaaatat
     7921 ggcgccctgt ccgagggacg gggccgcatc gaggtgtcgt ggcggatcgt gcctgccgcc
     7981 gacggcgatc ggctgtccct cgactggcgg gaaatcgatg ggccgactcc gccagcttcg
     8041 atcgccgagg gcttcggcac tggttttatc agacgcagcg tggaatatga gctgcagggc
     8101 acggcgacga tggagccatc gcctaccggt ttgcgttggg ttcttgaggt cccttcgaag
     8161 ggcaacgttc agcgggcgtg agccaaagcc ggaaagtgca tgccgtcgat gcctcctgaa
     8221 ctccgtggtc tcaggatcct cgtggtcgag gataattttc tcatggccga atcggtgcgc
     8281 gacctgctcg acgaatgcgg ctgcgagacc gtgggtcccg cgccgcgcct ggaggtcgcg
     8341 ttggagctgg ccagtcatga gcttctcgac ggcgctcttc tcgacatcaa tctggcgggg
     8401 gagtactgct ttccggttgc aagactgctg cgcgagcgag gcgtgccttt catgttcctg
     8461 acgggctatg acgactgttc catcgtttcc atcgttccgg tggcgttcca ggacgcgcca
     8521 cggctttcca agccgttcga tcgcctcgag gttgccgtca cggccgcccg gcattttgtt
     8581 ccgacgccgt cctgagtgcc tggagaccgg cggtgaccct tccgacgcat cagcaggatc
     8641 gtcgaccttg gcacggcgga aggatcctcg ttgccgaaga caactacatg ctggccgatg
     8701 tcatctgcga tttcctgcgc gattgcggcc tcacgccggt cgggccggcc gcccgtttgc
     8761 cggaggcgag ccgcctcgcc cgccagcgcg cattggacgg cgccgtcctc gacctcaagc
     8821 tcggcgagcg cctctgcctg ccggtctgct cgatcctgtc ggcccgccgg attcccttcc
     8881 tcttcctgac cggctacggc gatctgtcgc tgatcccgct cgagtttcgc tccgtgcccc
     8941 tgatctgcaa gccgttcgaa accgacgaaa tgaaatcggc gctcgcggcc atgctcgatc
     9001 gcagcctgtc ggccttggca cccggcgcct cgccggtggc ccgaccgaac tagctcaacg
     9061 agggttgacg ggcgaccgtg tggtggcgga gcgcagccgc aattgggagt cctcgatccg
     9121 ttcgaagctg cgcgccatca gccggtcctg acgcttgcga tggatggcaa ggccttcgcg
     9181 aatacggcaa agccgaagcc gggcctgctc catccattcg cgccgatcga cgtagatggg
     9241 cctcgagggc ggcgccggga tcgatggctt gtgcggccgg tgctgctcgg cgccaaccgc
     9301 atcgccggac aggccgatcg tcaacaaacc gatgcgctgc tggccgacgc tcgtcagacg
     9361 caatccgtcg gcggcgtctt cgacgagagc aagcctcatc agccgctcgg cgtaacggaa
     9421 ggcgacatcg gccgagccgt aggccacacg ccgcaacgcg atctcttcat tggggctgag
     9481 agggacaatc aatccgcgaa ccatcggatc cccctgctca ttcagctcca atctaaggct
     9541 cgctttgttt tcagcttcaa gacggttcta cccaccgtct gtggataggg cgatgcggct
     9601 caacggttgg ggctgagccg aaaatgcttc taccgcattt ggggtcgtgg ccttgcctcc
     9661 gtcatcttcc cttgaacgcc cgcgcgatct gatcgcccag cggcttcacg agataggaca
     9721 ccacggtgcg cggcgtggtc tggatgaagg cctcgaccgg catgccggcg accagcttca
     9781 gcccgtcaag gcgcgccagc tcgtcatcgg caatgcggat gcgcacggcg tagtagcttt
     9841 cacccttctt ctcttcctgc gtgacgtcgg cgccgatgcg cacgatctcg ccgttgagct
     9901 gcggcgtggt gcgctggttg aaagccgtga agcgcaccac ggcgcgctgg cccatatgga
     9961 cctggtcgat ctcgtgcggc gcgatcctcg cctcgatggc aaggctgtcg ccgtcgggca
    10021 cgatcagcat gacggactcg cccgcctgga tgacgccgcc gaccgtgtgc acgctctgct
    10081 gaaacacctt gccgtcctgc ggcgcgacga ggtcgatgcg cttgagctgg tcttcggcgg
    10141 cgacgcgctt ttcaaccagc tcggatttct tgccacgaat gtcggccagc tccttgccga
    10201 cctcggtgcg caggtcctcg tcgatctgca ggattttcaa ctcggtctcg gcgatacggc
    10261 ccctggcctg ggccgccgtc gcgatcaggg cgccgcgctc gccctcgagc cgcgctccgt
    10321 cgcgctccag cgtggtgacg cggctgaacg gcaccaggct ctgtttccag agatcgcgca
    10381 cgcctttgag ctcccgcttg atccagtcga tctccttggc cttggcggct tcctgctcgg
    10441 ccgtcccctg gatctgctgg ccgagctggg cgatctgctc cttgagctgg gccttctgtc
    10501 cctcgcgcgc gccgcggcgg atctcgaaca gcctctgctc gcccgccgtc acgcgctgaa
    10561 cgtcgggatc gtccttgcgg gctagaagat cggctggaaa gcttatgcgg tccgccccat
    10621 cgcgctcggc ctcaccgcgc gcctggcgcg cttcgagctc gtcgatcgcc ttggtgacga
    10681 ttgcccaatt ggcgcgcgcc tgggtctcgt cgagccgcac cacgacctcg cctgccttga
    10741 cgcgatcgcc gtccttcacc cgcaattcgc cgaccacgcc gcccgccgga tgctggacct
    10801 tcttcacgtt cgaatcgacg acgagctggc ccggcgcgat caccgcgcct gaaagctcgg
    10861 tcgtcgtcgc ccagccgccg acgccgccca acagcacgag ggcagccgcg gaaccaacca
    10921 gcagatggcg gcggatggag ggatgggtca tgtcaggccg ctcccgccgc gctggcggca
    10981 acgcgaagcg gcgccggccg cagggtctgc ttcagcacgg tctccttcgg cccgaacgat
    11041 tccaggcgtc cggcgcgcat caccagcaag ctatcgacgc cggcgagtgc gctcggccga
    11101 tgggcgatca cgatcgcgat gccgccgcgc gcgcggacgc ccaggatggc gcgtgcgagc
    11161 gcctcctcgc cctcgtggtc gagattggcg ttgggctcat cgagcacgac caggaagggt
    11221 tcgccgtata gcgcgcgggc cagaccgatg cgctggcgct ggccggccga gagcgccgcg
    11281 ccggcctcgc cgatctgggt ttcgtaaccc tcgggcaggc cgaggatcag ctcgtgcacg
    11341 ccggcggcgg cggccgcagc aatgacctgc tcggacggcg cctgcggctc gaaccgcgcg
    11401 atgttctcgg ccaccgtgcc ggcgaacagc tccatgtcct gcggcaagta gccgatatgc
    11461 ggccccagcg cctgcgacga ccattgatcg agagcggcgc cgtcgaggcg gatcttgccg
    11521 cggaccgcac tccagacgcc gacgatggcg cgcgccagcg acgacttgcc cgacgcgctc
    11581 ggcccgatga tcccgagccc ctgtccggcc ttcagttgaa acgccatgtc ctgcacgacg
    11641 acccgttggg tgcccggcgg tacgatgctc acggtttcga ctgccaggga atggaccggc
    11701 ttgggcagca ccaggcgcgg cgggtcggcg gcgaccttgc ccagaagagt atcgagccgc
    11761 cgccagctct ggcgcgccgc gacgaagccg cgccagtggg cgatggcgag ctcgatcggc
    11821 gccagtgcgc gcgaggtcag gatcgagctc gcgatgatga tgccggccgt ggcctgctgg
    11881 ttgatcacca gccaggcgcc gatcccgagc acgcccgact gcagcgccat gcgcagcacc
    11941 ttcgacagcc cgccgaggcc cgcggcgatg tcggcggtgc gctggtgggc ggccaggtag
    12001 tcgcgattgc tttgccgcca gcgcgcgccc agccgtcccg ccatgcccat ggcctgtact
    12061 gcctcggcat tgcgccggcc ggcctcggcc aggctggtgc ggttgccggc cagggtcgcg
    12121 gcctcggcgg cgggcgcacg cgtcaaaaac tcggtgagca gggtgacggc gatcaggatc
    12181 agcccgcccg cggtcgccgc gacaccgatc caagggtgga agagatagca gatgccgaga
    12241 tagagcggca tccagggcag gtcgaacagc gccgacgggc cgccggcgcc gaggaagctg
    12301 cgcacctggt cgaggtcgcg cagcggctgc aggcccggcg aggccgagcc ccgcagcggc
    12361 agcttcatca gaacgtgatg gacgcgctcg ctgaccgctt cgtccaaaga gccgccgacc
    12421 cgcaccagga tgcggctgcg gacgatgtcg aaga
//
LOCUS       DASWGA010000092         2231 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_769435, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000092 DASWGA010000000
VERSION     DASWGA010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769435"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VF991_02160"
     CDS             complement(<1..190)
                     /locus_tag="VF991_02160"
                     /inference="COORDINATES: protein motif:HMM:NF013216.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEX9555267.1"
                     /translation="MDASLASRHAALDVLVACLDKGQPLDDALAAHPGFASLEPRDRA
                     FVRLLLATTLRRLGEIDQV"
     gene            271..1296
                     /locus_tag="VF991_02165"
     CDS             271..1296
                     /locus_tag="VF991_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9555268.1"
                     /translation="MNKLALALAIGLLGSSAMAPLAKAQDKPVDLKISIWLPPAHPLV
                     PATKEWAADIEKQSGGTIKTAIFPSEQLGKAFDHYDMARDGIADLTYVNPGYQPGRFP
                     IIAVGQIPFTFADAKKGTAALDAWYRKQAATEMKDTHFCFAFIHDPATYHGRKKVTVP
                     DDIKGMKIRPAQSTIGQMVTMLGGTNVQASAPEARDVLERGVADGIFFPWGSMFLFGL
                     DKVTKYHIDAPLYSTVFTYSMNKAKYDAMAPAQKKVIDDHCTTEWAVKLSSPWHDFEA
                     AGRDKMKAAAGHEVYALSPDQLKAWKASVAPLQKAWAEAVKKAGGDPDALYKDFEATV
                     AKYQAGF"
     gene            1459..1965
                     /locus_tag="VF991_02170"
     CDS             1459..1965
                     /locus_tag="VF991_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX9555269.1"
                     /translation="MKRSVMDRIIDTIEAIAAMFVGLVAADIFLSVLLRRFFSLQIPD
                     SYDFGRMLLGILIFWGIAATSYRGGHITVDLVWASASPRWKRAIDVFATLVLLFVVTV
                     QTYTLFDKVHATYNDNVLTYDLGLPTWPFFAIAWAGDVSAVVLIAIRTYRLIFHPEDL
                     HDESPAAR"
     gene            1962..>2231
                     /locus_tag="VF991_02175"
     CDS             1962..>2231
                     /locus_tag="VF991_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX9555270.1"
                     /translation="MSADSVAILGFVVLFALMLLRVPVGMAMGLVGVSGYAYLSGGAP
                     ALKLVGQTSMRTVTDYQFGVIPMFLLMGAFVSNSGVSRELFRAANT"
BASE COUNT          383 a          733 c          727 g          388 t
ORIGIN      
        1 gtacttggtc gatctcaccc aggcggcgca gcgtcgtcgc caacagcagg cggacgaagg
       61 cgcggtcgcg cggctcgaga ctggcgaagc ccgggtgagc cgccagcgca tcgtccaacg
      121 gctggccctt gtcgaggcag gcgaccagca cgtcgagcgc ggcgtgccgg gaggcgagcg
      181 aggcatccat tgcgcggcgc tataaacccg gttggcgctg ttgtcatggg ccgatacagt
      241 tgggggagca aacaattggg aggaacggcc atgaacaagc tcgctctggc gctggcaatc
      301 ggcctgctgg gctcgtcggc gatggccccc ttggcaaaag cccaggacaa gccggtcgac
      361 ctgaagatct cgatctggct gccgcccgcg catccgctgg taccggcgac caaggagtgg
      421 gcggccgaca tcgagaagca gtcgggcggc acgatcaaga cggcgatctt tccctccgag
      481 cagctcggca aggcgttcga ccactacgac atggcgcgcg acggtatcgc cgatctgacc
      541 tacgtcaatc ccggctacca gcccggccgc tttcccatca tcgccgtcgg ccagatcccc
      601 ttcaccttcg ccgacgccaa gaagggcacg gcggcgctcg acgcctggta ccgcaagcag
      661 gcggccaccg agatgaagga cacgcacttc tgcttcgcct tcatccacga tcccgccacc
      721 tatcacggcc gcaagaaggt gacggtgccc gacgacatca aaggcatgaa gatccgcccg
      781 gcgcagagca cgatcggcca gatggtgacc atgctgggcg gcaccaacgt gcaggcctcg
      841 gcgccggaag cccgcgacgt gctcgagcgc ggcgtcgccg acggcatctt cttcccgtgg
      901 ggctcgatgt tcctgttcgg cctcgacaag gtcaccaagt accacatcga cgcgccgctc
      961 tattcgaccg tgttcaccta ctcgatgaac aaggccaagt acgacgcgat ggcgcccgcc
     1021 cagaagaagg tgatcgacga tcactgcacg accgaatggg cggtcaaact ctcctcgccg
     1081 tggcacgact tcgaggccgc cggccgcgac aagatgaagg cggcggcggg ccacgaggtc
     1141 tatgcgctct cgcctgacca gctcaaggcc tggaaggcga gcgtggcgcc cttgcagaag
     1201 gcgtgggccg aggcggtcaa gaaggccggc ggcgatcccg acgcgctcta caaggacttc
     1261 gaggcgacgg tcgccaagta tcaggcgggg ttttgagatc gtgaaactct tcttcgcctt
     1321 cttcttcaaa ttcctctccc ccgctagggg gagaggctag gtgagggggt tgcacgagct
     1381 ttcgatgccc cctcacccgt cctctccccc tagcggggga gaggagaagc aagaacgtga
     1441 ggagggcagg ggtgccccgt gaagcgtagc gtgatggatc gcatcatcga cacgatcgag
     1501 gcgatcgcgg cgatgttcgt ggggttggtg gcggccgaca tcttcctgtc ggtgctgctg
     1561 cgtcgcttct tcagcctgca gatccccgat tcctacgatt ttggccgcat gctgctcggc
     1621 atcctgatct tctgggggat cgccgccacc tcctatcgcg gcggccatat cacggtcgac
     1681 ctggtctggg cctcggcgag tccgcgctgg aagcgggcga tcgacgtgtt cgccacgctg
     1741 gtgctgttgt tcgtggtcac ggtgcagacc tacacgctgt tcgacaaggt gcacgcgacc
     1801 tacaacgaca acgtgctgac ctacgatctc ggcctgccga cctggccgtt ctttgcgatc
     1861 gcctgggcgg gcgacgtctc ggccgtggtg ctgatcgcca tccgcaccta ccgcctgatc
     1921 ttccatcccg aggacctgca cgacgaaagc ccggccgcgc gatgagcgcc gattcagtcg
     1981 ccatcctggg ctttgtcgtg ctgttcgcgc tgatgttgct gcgcgtgccg gtcggcatgg
     2041 cgatggggct ggtcggcgtc agcggctacg cctacctgtc gggcggcgcg ccggcgctga
     2101 aactggtcgg ccagacgtcg atgcgcacgg tcaccgacta ccagttcggc gtcatcccga
     2161 tgttcctgct gatgggcgcc ttcgtgtcga actccggcgt cagccgcgag ctgttccgtg
     2221 ccgccaacac c
//
LOCUS       DASWGA010000093         3394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_12490, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000093 DASWGA010000000
VERSION     DASWGA010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3394
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12490"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /gene="hslV"
                     /locus_tag="VF991_02180"
     CDS             complement(<1..455)
                     /gene="hslV"
                     /locus_tag="VF991_02180"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEX9555271.1"
                     /translation="MSPQSESAPAPGWHATTILSVRKGGQVVMAGDGQVSMGQTIVKA
                     NAKKVRRLGNGQIVGGFAGSTADAFTLFERLEAKLERHPGQLLRACIELAKDWRTDRY
                     LRRLEAMMAVADKDVSLLLSGSGDVLEPEGGIIAIGSGGNYALAAARAL"
     gene            535..1782
                     /locus_tag="VF991_02185"
     CDS             535..1782
                     /locus_tag="VF991_02185"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9555272.1"
                     /translation="MTDQSIIVIGAGIVGTATARALQRAGHAVTLLDSAEPGRATSYG
                     NAGFIAIDHLLPLARPSTLRRVPQMLMDRTGPLTVHPPSLPWLLPWMARFALAAYSPA
                     EVKKGVDSFGALMAEANIAWKAEIQASGLGELFKTEGALYVYESETAFAAGEEERALQ
                     KAKGTAFEIVDGNRARELAPGLSERIVRGVYYSHGMHTINPYKVAATLAERFAAEGGS
                     ILRGRVRGFGRDGDRVTSVKTTDQDLAAKAVVIAAGRASGELTRLLGFNAPLVAERGY
                     HVMLAPDNVRFALPVSPAERGFFITPMEEGLRVAGTVELAAPHQPPSWHRADLLVRHL
                     KEVFPGVGGAERSRWIGERPSLPDFRPAIGRAPRLANVYCGYGHQHVGLTLATATGRL
                     IARQIEGEALPEALHACDPGRFG"
     gene            1868..3334
                     /locus_tag="VF991_02190"
     CDS             1868..3334
                     /locus_tag="VF991_02190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555273.1"
                     /translation="MSSHRSPAEVRSSLNHPIIDADGHWIEYGPVFAERMRKVAGDKA
                     ADGFLAAQRRIPDALNLSIAKRKQRGIAMEGYWSRQSTNTRDRATAMMPRMLYDRLDE
                     LGIDFGVVYPTAGLSIPRIADDETRRAVVRGFNIVTAEYFAKLSDRLTPAAVIPMFTP
                     DEAIAELDFVTKQLGAKVGMFGGGIPRRVPMAKDLDPALGRFAVTYENLGIDSDHDYD
                     AVWQKCRELSMAPTFHAGGRGFGLRNSPSNFTFNHIGHFAAAGHSIAKGLFLGGVTRR
                     FPDLNFAFLEGGVGWGCQLFADLIEHWERRGAKGIAYMDPKKLDRGLLKSLVDKYGYE
                     DMAAELAKRDGWPSAEEDQLTGGMPVLDDFAACKIARKEDWVDLYARPYYFGCEADDR
                     MNVTAFGRANPFGARINAIFSSDIGHFDVPDMLSPVPEAYELVEDELITPDDFRDFTF
                     ANAVRLWGTQNPRFFEGTRVAKEAAALLNVVPARAAAE"
BASE COUNT          557 a         1171 c         1115 g          551 t
ORIGIN      
        1 atcagcgcgc gcgccgcggc cagcgcatag ttgccgcccg aaccgatggc gatgatgccg
       61 ccctcgggct cgagcacatc gcccgagccg gaaagcagca gcgacacgtc cttgtcggcc
      121 accgccatca tcgcctcgag ccggcgcagg tagcggtcgg tgcgccagtc cttggcaagc
      181 tcgatgcagg cgcgcaggag ctggccggga tggcgctcga gcttggcctc caggcgctcg
      241 aacaaggtga aggcatcggc cgtcgagccg gcgaagccgc cgacgatctg gccgttgccc
      301 aggcggcgga ccttcttggc gttggccttg acgatggtct ggcccatcga gacctggcca
      361 tcgcccgcca tcacgacctg gccgcccttg cggaccgaca gaatggtcgt ggcgtgccaa
      421 ccgggcgccg gggcactttc ggattgtggg gacatggagc cgtaaatagt catttgcggc
      481 ggtaaatcaa tcggagtcac ccggcggctt cagggaccgt gctaacttgg ttcaatgacc
      541 gatcaatcca tcatcgtcat cggcgcagga atcgtgggaa cggcgacggc gcgggccctc
      601 cagcgcgccg gccacgccgt caccctgctc gacagtgccg agcccggacg cgccacgtcc
      661 tacggcaatg cgggattcat cgccatcgat cacctcctgc cgctcgcccg gccctcgacg
      721 ctgcggcgcg tgccgcagat gctgatggac cgcaccggcc cgctcaccgt ccatccgccg
      781 agcctgccct ggctgctgcc ctggatggcg cgcttcgcgc tggccgccta cagcccggcc
      841 gaggtcaaga agggcgtcga ctcgttcggc gcgctgatgg ccgaggccaa catcgcctgg
      901 aaggccgaga tccaggcgtc gggtcttggc gaactcttca agactgaggg cgcgctctat
      961 gtctacgaaa gcgaaaccgc ttttgccgcc ggcgaagagg agcgcgccct gcagaaggcc
     1021 aagggcacgg cgttcgagat cgtcgacggc aaccgggcgc gcgagctggc gccgggcctg
     1081 agcgagcgca tcgtgcgcgg cgtctactac tcgcatggca tgcacaccat caatccctac
     1141 aaggtggcgg cgaccctggc cgagcgcttc gccgccgagg gcggcagcat cctgcgcgga
     1201 cgagtacgcg gcttcggccg tgacggtgat cgcgtgacgt cggtcaagac caccgaccag
     1261 gacctggcgg caaaagcggt ggtgatcgcg gccggccgcg cgtcgggcga gctgacgcgg
     1321 ctgctgggtt tcaacgcgcc cctggtggcc gaacgcggct atcacgtcat gctggcgccc
     1381 gacaatgtgc gcttcgccct gcccgtcagt ccggccgagc gcggtttctt catcacgccg
     1441 atggaggagg ggctgcgcgt ggccggcacg gtcgaactgg cggcgccgca ccagccgccg
     1501 tcctggcatc gcgccgatct tttggtgcgc catctcaagg aggtcttccc gggggtcggc
     1561 ggcgccgaac gcagccgctg gatcggcgag cgtcccagcc tgccggactt tcgccccgcg
     1621 attggtcgcg cgccgcggct ggccaatgtc tattgcggct acggccatca gcatgtcggc
     1681 ctcacgctcg ccaccgcgac cggccggctg atcgcccgcc agatcgaagg cgaggcgctg
     1741 ccggaggccc tgcacgcctg cgaccccggc cgcttcggct agaatccgct tctgtttcgt
     1801 tgcgcggcgt tgccggtggc gttagcgttg gcggtcaatt ggcgaattgg cgaccttgga
     1861 gacaagcatg agctctcatc gcagccccgc agaagttcgt tccagcttaa atcatcccat
     1921 catcgacgcc gacggacact ggatcgaata cggcccggtc ttcgccgagc gcatgcgcaa
     1981 ggtcgccggc gacaaggcag cggacggctt cctggccgcc cagcggcgca tccccgacgc
     2041 gctcaacctg tcgatcgcca aacgcaagca gcggggcatc gccatggagg gctactggag
     2101 ccgccaatcg accaacacgc gcgaccgcgc gacggcaatg atgccgcgca tgctttacga
     2161 ccggctcgac gagctcggca tcgatttcgg cgtcgtctat ccgaccgccg gcctcagcat
     2221 cccgcgcatc gccgatgacg agacccgacg cgccgtggtc cgcggcttca atatcgtcac
     2281 cgcggaatac ttcgccaagc tcagcgaccg gctgacgccg gcggccgtga tcccgatgtt
     2341 cacgccggac gaagccatcg ccgagctcga cttcgtgacc aagcagctcg gcgccaaggt
     2401 cggcatgttc ggcggtggca tcccgcgccg ggtgccgatg gccaaggacc tcgatcctgc
     2461 gctcggccgt ttcgccgtga cctacgagaa tctcggcatc gacagcgatc acgactatga
     2521 cgccgtctgg cagaaatgcc gcgagctcag catggcgccg accttccatg ccggcggccg
     2581 cggcttcggg ctgcgcaact cgcccagcaa cttcaccttc aaccatatcg gccactttgc
     2641 cgctgccggc cattccatcg ctaagggcct gttcctgggc ggcgtgacgc gacgcttccc
     2701 cgatctcaac ttcgctttcc tcgaaggcgg cgtcggctgg ggctgccagc tcttcgccga
     2761 tctgatcgag cattgggagc ggcgcggcgc caagggcatc gcctacatgg atcccaagaa
     2821 gctcgaccgc ggactgctca aaagcctggt cgacaaatac ggttacgaag acatggcggc
     2881 cgaactggcc aagcgcgacg gctggcccag cgccgaagag gaccagctga cgggtggcat
     2941 gccggtgctc gacgactttg cggcttgcaa gatcgcccgc aaggaggact gggtcgatct
     3001 ctacgccagg ccgtactatt tcggctgcga ggccgacgac cgcatgaacg tgacggcctt
     3061 cgggcgagcc aacccgttcg gcgcgcggat caatgcgatt ttcagctcgg acatcggcca
     3121 tttcgacgtg ccggacatgc tgagcccggt gcccgaagcc tacgagctgg tcgaggacga
     3181 gctcatcacg ccggatgatt tccgcgactt caccttcgcc aatgccgtgc ggttgtgggg
     3241 cacgcagaac ccgcgcttct tcgagggcac gagggtggcc aaggaagccg cggcgctgct
     3301 gaacgtcgtt ccggctcggg ctgccgccga gtagccagtg gcgctctgtg gggctcatat
     3361 tcttccggac cgcgggcttc cagcccgctc atga
//
LOCUS       DASWGA010000094         6959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_640880, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000094 DASWGA010000000
VERSION     DASWGA010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6959
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_640880"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VF991_02195"
     CDS             <1..186
                     /locus_tag="VF991_02195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9555274.1"
                     /translation="RIYGLISIGMGLGGFLGAWVGGLLHDWTGGYAAVMIFAAAALAL
                     AAASLGAEAGARERLSR"
     gene            complement(183..1349)
                     /locus_tag="VF991_02200"
     CDS             complement(183..1349)
                     /locus_tag="VF991_02200"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9555275.1"
                     /translation="MDTIAARRPQTATNFPLPPADLESLGFRRQQIDRLVALIERHIA
                     EGRYPGCQIALARHGKLALYKSFGDAVTEPKARAAADDTLWLLYSNTKVVTAVTLWAL
                     AERGLFSFSDRIADHVPDFRKHAKGNITVLQTITHQAGFPNAVVAKDAWANHKRLRDV
                     VCDFPLEWSPGSKVHYHGLSAHWTLGVLIEAITGRDFRDVIRDTVAEPLGLGRELYVG
                     LPESEFARAAAMHEPMPVGNGFRADADANSTEWRKSGAPGGAGYGTARAMAALYQMML
                     SGGELGGVRIVSPRILQYAIRNHTGDRVDEYMGMPMHRGLGPHIRGTTENIRGLGGFA
                     NPRVFGHGGVGTSYCWGDPESGVSFAYITNNRIPDPWHGKRLDLIANFVHSAIV"
     gene            1519..2082
                     /locus_tag="VF991_02205"
     CDS             1519..2082
                     /locus_tag="VF991_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007066411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX9555276.1"
                     /translation="MTPGLESCYALVLNADFRPLSYFPLSIWSWQDAVKAVFLDRVSV
                     VSEYERKIHSPSFEMNLPSVIALKEYVPAARRPAFTRFNVFLRDRFNCQYCGGDFATN
                     ELTFDHVVPKSRGGRTAWSNVVTACSPCNLLKGNRLVREIGMHLQRAPLEPTTQELQE
                     NGRAFPPGYLHESWRDFLYWDSELDQT"
     gene            complement(2136..2699)
                     /locus_tag="VF991_02210"
     CDS             complement(2136..2699)
                     /locus_tag="VF991_02210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethoxyubiquinone hydroxylase family protein"
                     /protein_id="HEX9555277.1"
                     /translation="MKTGEVRNPGDPDARDLIERTLRVDQAGELGAVRIYQGQLAALR
                     WTGRANSEAGRKIAAMARTEREHNKVFDRLLVERRVRPTALSPLWNVAGFALGAATAL
                     LGDKAAMACTVAIEETIDEHYADQATALGDDEALLRGTIEKFRAEEIQHKDEALAAGA
                     EQAPAYEALTTAIKAGSRLAIWLSTRI"
     gene            complement(2696..3208)
                     /locus_tag="VF991_02215"
     CDS             complement(2696..3208)
                     /locus_tag="VF991_02215"
                     /inference="COORDINATES: protein motif:HMM:NF014639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEX9555278.1"
                     /translation="MTLSEHLPAPSQLGLLALLGSGALLGGAYYFQYVVGLAPCEMCY
                     WQRWPHMVAIAAGLAALGSFAWPRLALVLVMTAITALIVSAAIAVFHVGIEYHWWTGP
                     LACSGGVPLGLSPEQLKRYLFSAKMVRCDAPAWQMWGISMAGWNAILSAVLAFVLASG
                     VANWVRSSRP"
     gene            complement(3218..3799)
                     /locus_tag="VF991_02220"
     CDS             complement(3218..3799)
                     /locus_tag="VF991_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HEX9555279.1"
                     /translation="MLRRLYDWVIRLAAHPRAIPALGVISFLESSIFPIPPDVMLIPM
                     VLADRTKAFRIALVCTVCSVLGGLLGYAIGYYFFETIGEWLVKTYGLQAGLAAFRAGF
                     EQYGIWIILIKGLTPIPYKLVTIASGAAHFDLFTFVWASIVTRGVRFFAVAALLWRFG
                     EPIRSFIEKRLTLLTWLFLIALVGGFVAFRYIF"
     gene            complement(3937..4938)
                     /locus_tag="VF991_02225"
     CDS             complement(3937..4938)
                     /locus_tag="VF991_02225"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase family protein"
                     /protein_id="HEX9555280.1"
                     /translation="MALPALLRDSLSIPAVGAPLFIVSNPDLVIEQCKAGIVGAFPAL
                     NARPKELLETWLQRITTELREYKQKYPDRQVAPFAVNQIVHSSNDRLQHDVDLCEKYQ
                     VPIQITSLRAPDDVVKSARRYGCLVFHDVTNVTHAKRALQAGVDGLILVCAGAGGHAG
                     RLSPFALVPEVRQFYDGCLLLSGAIANGASVLAAQAVGADLAYIGTRFTASREANASE
                     GNKQCIIDSAGEEIVYTNLFTGVHGNYLKRSIAAAGLDPDELPEADKSKMNFGSGGNS
                     KAKAWRDIWGAGQGVGQIFDAPPAAEIVARLKAEYEAARAALFAGETVPTRLKQAAE"
     gene            complement(5103..5768)
                     /locus_tag="VF991_02230"
     CDS             complement(5103..5768)
                     /locus_tag="VF991_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEX9555281.1"
                     /translation="MITVHHLNNSRSQRVLWMLEELGLDYEIKAYQRQPSMQAPDSLR
                     AVHPLGKSPVITDGDKTLAESGAILEYLAETYGKGRLAPPAGTPERLRYTYFMHYAEG
                     SLMPLLFMKLVFTRLPERVPWAMRPVARMISAGADKALLGPQISNHFAFLESELAGRD
                     WFAGSEFSAADIQMSFPVEAAAARAGLDARLPRLKAFVDRIQARPAYKRAVERGGPAT
                     PPK"
     gene            complement(5765..>6959)
                     /locus_tag="VF991_02235"
     CDS             complement(5765..>6959)
                     /locus_tag="VF991_02235"
                     /inference="COORDINATES: protein motif:HMM:NF015043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carotenoid oxygenase family protein"
                     /protein_id="HEX9555282.1"
                     /translation="WVRTPKWQMEHDEGEGMSGSFGMPQTTDPRLFALQSTTANTNIV
                     WHAGRLMTLEEGHAPFLLDPASLKSPTLNGGYETYGGKVKGPFTAHPKFDPTTGEMVF
                     FGYGAKGPFTPFVSLHTADSNGAITRAEMLETPFPSMVHDFAVTRNWIIVPNFPLTGS
                     MERAMSGKPAFAWELDKGTHIAFIPRNGTVADTKWVTAPACYVFHAMNHYETADGRIV
                     IDVMKYDVAPLFPLPDGSPSTKQEPPSRLFRWTFDLSGKSKSFHEAQLDDRVGEFPRF
                     DERLCMADYRHGWTVSARDSASGREREEGDQLTHYDLKTGKSADWRPGRGDRLSEPVF
                     VSRAAQAAERDGWVLSVIFRAAEKRSDLAVFEAIDIAKGPVALAHLSSRVPAGFHGNW
                     RPGSL"
BASE COUNT         1132 a         2267 c         2423 g         1137 t
ORIGIN      
        1 cgcatctacg gcttgatcag catcggcatg ggcctcggcg gctttctagg cgcctgggtc
       61 ggcggcctgc tgcacgattg gaccggcggc tatgccgcgg tgatgatctt tgccgccgct
      121 gcgctcgccc tcgccgccgc ctcgctcggc gccgaggccg gcgcgcgcga gcgcctcagc
      181 cgctagacaa tcgccgaatg gacgaagttg gcgataaggt cgagccgctt gccgtgccag
      241 ggatcgggga tgcggttgtt ggtgatgtag gcgaacgaca cgcccgactc gggatcgccc
      301 cagcagtacg acgtgccgac gccgccgtgg ccgaacacgc gcgggttggc aaagccgccg
      361 agcccgcgga tgttctcggt cgtgccgcgg atgtgggggc cgaggccgcg atgcatgggc
      421 atgcccatgt attcgtcgac ccgatcgccg gtgtggttgc ggatggcgta ttgcaggatg
      481 cgcggcgaga cgatgcgcac cccgccgagc tcgccgcccg aaagcatcat ctgataaagc
      541 gcggccatgg cgcgggcggt gccgtagccc gcgccacccg gcgcaccgct cttgcgccac
      601 tccgtcgaat tggcgtcggc gtcggcccgg aaaccgttgc cgaccggcat cggctcgtgc
      661 atagcggcgg cgcgggcgaa ctcggactcg ggcaggccga catagagctc gcggccgagt
      721 cccagcggct cggcgaccgt gtcgcggatg acgtcgcgga aatcgcggcc ggtgatggcc
      781 tcgatcagga cgcccagggt ccaatgggcg ctcagcccgt gatagtggac cttcgagccg
      841 ggcgaccatt ccagcggaaa gtcgcagacg acgtcgcgca ggcgcttgtg gttggcccac
      901 gcatccttgg cgacgacggc gttgggaaag cccgcctgat gggtgatggt ctgcaggacg
      961 gtgatgttgc ccttggcgtg cttgcgaaag tccggcacgt ggtcggcgat gcggtcggag
     1021 aaggagaaca ggccgcgctc ggcgagcgcc cacagcgtga ccgccgtcac caccttggtg
     1081 ttggagtaga gcagccacag cgtgtcgtcc gccgccgcgc gcgctttcgg ctcggtgacc
     1141 gcgtcgccga agcttttgta gagcgcgagc ttgccgtggc gggcgagcgc gatctggcag
     1201 ccgggatagc ggccctcggc gatgtggcgc tcgatcagcg cgaccaagcg gtcgatctgc
     1261 tggcgccgaa agcccagcga ttcgagatcg gccgggggca gcggaaagtt tgtggccgtt
     1321 tgggggcgtc tggcggcgat ggtatccacg gcggttcctc ctgtggcgat catattattg
     1381 ttcgatggca tgtcgatgac ccttgcatcg acatattgtg tttccaaaaa accttgccac
     1441 aatgcgcgcc atgctgaccc gacttctcga ccgcatcgac ttcccgagta gtccctttca
     1501 acggccgcgt ggctagccgt gacgccgggc ctcgagtcct gttacgcgct ggtgctcaac
     1561 gccgactttc ggccgctgtc gtattttccc ttgtcgatct ggtcctggca ggacgcggtg
     1621 aaggccgtgt tcctcgaccg cgtcagcgtg gtttccgagt acgagcgcaa gatccacagc
     1681 ccgtcgttcg agatgaacct gccgagcgtc atcgcgctca aggaatacgt gccggcggcg
     1741 cgccggcccg ccttcacgcg gttcaatgtc ttcctgcgcg accgcttcaa ctgccagtat
     1801 tgcggcggcg acttcgcgac caacgagctc accttcgacc acgtcgtgcc caagtcgcgc
     1861 ggcgggcgca ccgcctggag caacgtcgtg accgcctgca gcccgtgcaa tctcttgaag
     1921 ggcaaccggc tggtgcgcga gatcggcatg cacctgcagc gcgcaccgct cgagccgacg
     1981 acgcaggagc tgcaggagaa cggccgagcc ttcccgcccg gctacctgca cgagagctgg
     2041 cgcgacttcc tgtattggga cagcgagctg gatcagacct agctctgtcg tctctcgcgg
     2101 gggtcacccc cgcgcgcgat gacatcaacg agtcgctaaa tcctcgtcga cagccagatc
     2161 gcgagccgcg agcctgcctt gatggcggtg gtcagcgcct cataggccgg cgcctgctcg
     2221 gcgcccgcgg cgagcgcctc gtccttgtgc tggatctcct cggcgcggaa cttttcgatg
     2281 gtgccgcgca gcagggcctc gtcgtcgccc agcgccgtcg cctggtcggc atagtgctcg
     2341 tcgatcgtct cctcgatcgc caccgtgcac gccatcgcgg ccttatcgcc cagcagcgcc
     2401 gtcgccgcgc cgagcgcgaa gcctgccacg ttccacaacg gtgacagcgc ggtcggccgc
     2461 acgcggcgct cgaccagcag gcggtcgaac accttgttgt gctcacgctc ggtccgcgcc
     2521 atggcggcga tcttgcggcc ggcctcgctg ttggcccggc cggtccaacg caacgcggca
     2581 agctggccct ggtagatgcg cacggcgccg agctcgcccg cctgatcgac gcgaagggtg
     2641 cgctcgatca ggtcgcgggc gtcgggatcg ccgggattgc ggacctcgcc ggttttcatg
     2701 ggcgcgacga ccttacccag ttcgcgacgc cggacgccag cacgaaggcc agcaccgccg
     2761 acaggatggc gttccagccg gccatcgaga tgccccacat ctgccaggcc ggcgcgtcgc
     2821 agcgcaccat cttggcgctg aacaggtatc gcttgagctg ctcgggcgag agcccgagcg
     2881 gcacgccgcc cgagcaggcg agcggtccgg tccaccagtg atactcgatg ccgacgtgaa
     2941 agacggcgat cgccgcgctg acgatcaggg cggtgatcgc cgtcatcacc agcaccaggg
     3001 caagccgcgg ccaggcaaag gaccccagcg ccgccaggcc agcggcgatg gcaaccatgt
     3061 gcggccagcg ctgccagtag cacatctcgc agggagccag gccgacgacg tattggaaat
     3121 agtaggcgcc tcccagcagc gcgccactgc ccagcaaggc gagcaggccg agctggctgg
     3181 gagccggaag atgttcggac agcgtcatgg acgtcactca gaatatatag cggaaggcga
     3241 caaagccgcc gaccagggcg atcaggaaca gccaggttag cagcgtcagc cgcttctcga
     3301 tgaagctgcg gatcggctcg ccgaaccgcc acagcaacgc tgccacggcg aagaagcgca
     3361 cgccacgcgt cacaatcgac gcccacacga acgtgaaaag gtcgaaatgc gccgcgcccg
     3421 aggcgatggt gaccagcttg taggggatgg gcgtcaggcc tttgatcagg atgatccaga
     3481 tgccgtactg ctcaaagccg gcgcggaagg cggcgaggcc cgcctgcagc ccgtaggtct
     3541 tgaccagcca ttcgccgatc gtctcgaaga aatagtagcc gatggcatag cccaagagac
     3601 cgcccagcac cgagcagacc gtgcagacca gggcgatgcg gaaggccttg gtgcgatcgg
     3661 ccagcaccat ggggatcagc atcacgtcgg gcgggatggg aaagatcgag ctttcgagga
     3721 aggagatgac gcccagcgcg gggatggcgc gggggtgagc cgccaaacgg atcacccaat
     3781 catagaggcg acgcaacatg cggcccgttc cctagcaggg gacgcgccct attgtcatcc
     3841 tgagcgcagc gaaggatctc atgcccgtgg caagcggcga tgaggtcctt cgcttacgct
     3901 ccagcgcggg ggttaccccg cgcgagacga caattatcat tccgccgcct gcttgagccg
     3961 cgtcggcacg gtctcaccgg cgaacagggc ggcgcgcgcg gcctcgtact cggccttgag
     4021 gcgggccacg atctcggcgg ccggcggggc gtcgaagatc tggccgacgc cctggccggc
     4081 gccccagatg tcgcgccacg ccttggcctt ggagttgccg cccgagccga aattcatctt
     4141 gctcttgtcg gcttccggca gctcgtcggg gtcgaggccg gcggcggcaa tgctgcgctt
     4201 gagatagttg ccgtgcacgc cggtgaacag gttggtgtag acgatctcct cgcccgccga
     4261 gtcgatgatg cactgcttgt tgccctcgct ggcgttggct tcccggctgg cggtgaagcg
     4321 cgtgccgata taggcgaggt cggcgccgac cgcctgcgcc gccagcaccg acgcgccgtt
     4381 ggcgatggcg cccgagagca gcaggcagcc gtcgtagaac tggcgcacct cgggaaccag
     4441 cgcgaacggc gacagccggc cggcatggcc gccggcgccg gcgcagacca ggatcagccc
     4501 gtcgacgccg gcctgcagcg cgcgcttggc gtgggtgaca ttggtgacgt catggaacac
     4561 caggcagcca tagcgccggg ccgacttgac cacgtcgtcg ggcgcgcgca gcgaggtgat
     4621 ctggatcggc acctggtatt tctcgcagag gtcgacgtcg tgctgcaggc gatcgttgga
     4681 gctgtgcacg atctggttga cggcgaacgg cgccacctgc cggtccgggt atttctgctt
     4741 gtactcgcgc agctccgtgg tgatgcgctg cagccaggtc tcgagcagct ccttcggccg
     4801 cgcattgagc gccggaaagg cgccgacgat gccggccttg cactgctcga tcaccaggtc
     4861 ggggttggag acgatgaaca gcggcgcgcc gaccgccggg atcgagaggc tgtcgcgcag
     4921 cagagccgga agggccatgg atttcgctcc ttggaagggc tattcgcaga gttcgggccg
     4981 gcctagcacg aagcgccgcg ctcaggaacc gaacaccgcg cggtgcagca atcggccggg
     5041 cagcagcgtg agcaggccgg cgatccagat gccggccgcg gcgatcggct gccagctcat
     5101 ttctacttcg gcggcgtggc ggggccgccg cgctccaccg cgcgcttgta ggccggcctg
     5161 gcctggatgc ggtcgacgaa ggcttttagc cgcggcagcc gcgcgtcgag accggcacgt
     5221 gcagcggcgg cttcgaccgg gaagctcatc tggatgtcgg cggcggagaa ttcggagccg
     5281 gcgaaccagt cgcggcccgc gagctcgctc tcgaggaagg cgaagtgatt ggagatctgc
     5341 gggccgagca gggccttgtc ggcgccggcc gagatcatgc gcgcgaccgg ccgcatcgcc
     5401 cacggcacgc gttcgggcag gcgggtgaac accagcttca tgaacagaag cggcatcagc
     5461 gagccttcgg cgtagtgcat gaaataggtg tagcgcagcc gctcgggcgt gccggccggc
     5521 ggcgccagcc gtcccttgcc gtaggtctcg gccaggtatt cgaggatggc gcccgattcg
     5581 gccagtgtct tgtcgccgtc ggtgatgacc ggcgacttgc cgagcggatg gacggcgcgc
     5641 agcgagtccg gcgcctgcat cgaaggctgg cgctgatagg ccttgatctc gtagtcgaga
     5701 ccgagctcct ccagcatcca cagcacgcgc tgggagcgcg agttgttgag gtgatggacg
     5761 gtgatcacag cgaacccgga cgccagttgc cgtggaagcc cgccgggacg cggctgctga
     5821 ggtgggccag cgccaccgga cccttggcga tgtcgatcgc ctcgaacacc gcgaggtcgc
     5881 ttcgtttctc ggcagcgcgg aagatcacgc tcagcaccca gccatcgcgt tcggcggcct
     5941 gcgcggcgcg cgacacgaaa accggttcgc tcagccggtc gccgcggccg ggccgccagt
     6001 ccgcgctctt gccggtcttg aggtcatagt gggtgagctg atcgccttct tcgcgctcgc
     6061 gccccgaagc actgtcccgg gccgacacgg tccagccgtg gcggtagtcg gccatgcaca
     6121 ggcgttcgtc gaagcgtggg aactcgccca cccggtcgtc gagctgggcc tcgtgaaagc
     6181 tcttgctctt gccactgagg tcgaaggtcc agcggaacaa acgggacggc ggctcttgct
     6241 tggtcgaggg cgagccgtcg ggcagcggga acagtggcgc cacgtcgtat ttcatgacat
     6301 cgatcacgat cctgccatcg gcggtctcgt agtgattcat cgcgtggaag acgtagcagg
     6361 ccggcgccgt cacccacttg gtgtcggcga cggtgccgtt gcgcgggatg aaggcgatgt
     6421 gcgtgccctt gtcgagctcc caggcgaacg ccggcttgcc gctcatggcg cgttccatcg
     6481 agccggtcag cgggaagtta ggcacgatga tccagttcct ggttacggcg aaatcgtgga
     6541 ccatgctggg gaacggcgtc tcgagcatct ccgcgcgcgt gatcgcgcca ttgctgtcgg
     6601 cggtgtggag gctgacgaag ggcgtgaagg gtcctttggc cccgtaaccg aagaagacca
     6661 tctcgccggt cgtcgggtcg aacttgggat gcgcggtgaa agggcccttc accttgccgc
     6721 cgtaggtctc gtagccccca ttgagggtcg gggatttcag gctggccgga tcgagcagga
     6781 acggcgcgtg gccctcctcc agcgtcatca gccggccggc atgccagacg atgttggtgt
     6841 tggccgtcgt cgattgcagc gcgaagaggc gcggatcggt ggtctgcggc atgccgaagc
     6901 tgccgctcat gccctcgccc tcatcatgct ccatctgcca cttgggcgtg cgtacccaa
//
LOCUS       DASWGA010000095         3019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_640946, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000095 DASWGA010000000
VERSION     DASWGA010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3019
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_640946"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1086)
                     /locus_tag="VF991_02240"
     CDS             complement(<1..1086)
                     /locus_tag="VF991_02240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007565908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX9555283.1"
                     /translation="MTILSSQVDTRSDIFKRNTEAMRGLVDDLRRRTAQVHLGGGEES
                     RKRHVARGKLLPRERVRALLDPGSPFLELSPLAALDMYDNEAPGSGVITGVGRVSGVE
                     CAIVCNDATVKGGTYYPMTVKKHLRAQEVAMENRLPCLYLVDSGGANLPQWPEVFPDK
                     THFGRIFYNQANMSAQGIPQIAVVMGSCTAGGAYVPAMSDETVIVRKQGTIFLAGPPL
                     VKAAIGEIVSAEDLGGADVHARTSGVADHYAHNDSHALGIARRIVANLNWKKSPSVSL
                     LEPREPKYAAEELYGIVPPDSRTPYDMREVIARLVDGSELDEFKHLYGTTIVTGFARI
                     WGYPIGIVANNGILFNESALKASHFIEL"
     gene            complement(1128..2078)
                     /locus_tag="VF991_02245"
     CDS             complement(1128..2078)
                     /locus_tag="VF991_02245"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555284.1"
                     /translation="MQTAFNPALPGSGEAVRIFTRTVKHMSGGALAIKIIEPGRVTPT
                     ADMLDAVVAGDLEAAFTWSGYAAAKAPVFGVFATVPFGPGPEDMTSWMLEGDGSRIHR
                     EAYDKLGVAGLPCGIQGAKGGGWYRSDLNTVADFKGQRLRFGRFSGEIVARLGATLVP
                     LPPGEFFYQLQQGKVDGGEMSTPAIDAALGFDKLGLPYYMPGWQQPSAVLDFLMRKDK
                     WEALSASLRVQIETACRANIAWMLSRSPHLQGLALESLRVSGVVIKQWSPELMTAFRG
                     KADIVLKEQADRDPDFAAALSNQRGFVGQSVGWRTLSRLP"
     gene            complement(2329..>3019)
                     /locus_tag="VF991_02250"
     CDS             complement(2329..>3019)
                     /locus_tag="VF991_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9555285.1"
                     /translation="GTKQFITSGRTADMALVFAVTDQANVKRGISCFIVPTRTPGYRV
                     ASIEKKLGQKSSDTCQIVFEECTVGADALLGTEGEGYRIALANLEAGRIGIGAQAVGM
                     ARAAFDAAHAYANDREAFGTKIVNHQAVQFRLADMATKIAVARQMVLHAATLRDAKRP
                     CLMEAAMAKLYASEMAEEVCSAAIQVHGGYGYVSDYLVEKIWRDVRVCQIYEGTSDVQ
                     RILIGRGLAAL"
BASE COUNT          510 a          984 c         1022 g          503 t
ORIGIN      
        1 cagctcgatg aagtgcgagg ccttcagcgc cgattcgttg aacaggatgc cgttgttggc
       61 gacgatgccg atcggatagc cccagatgcg ggcgaagccg gtgacgatgg tcgtgccgta
      121 gaggtgcttg aactcgtcga gttcgctgcc gtcgaccagc cgggcgatga cctcgcgcat
      181 gtcgtagggc gtgcggctgt cgggcggcac gatgccgtag agttcctcgg cggcgtattt
      241 gggctcgcgc ggctcgagca gcgagaccga cggcgacttc ttccaattga ggttggcgac
      301 gatgcgacgg gcgatgccca gcgcatggct gtcattatgg gcgtagtgat cggcgacgcc
      361 cgaggtgcgg gcatggacgt cggcgccgcc cagatcctcg gcgctcacga tctcgccgat
      421 cgccgccttc acgagcggcg gcccggccag gaagatggtg ccctgcttgc gcacgatgac
      481 ggtctcgtcg ctcatcgccg gcacgtaggc gccgcccgcc gtgcacgagc ccatcaccac
      541 ggcgatctgc gggatgccct gcgccgacat gttggcctgg ttgtagaaga tgcggccgaa
      601 atgggtcttg tccgggaaca cttcgggcca ctgcggcagg ttggcgccgc ccgaatcaac
      661 caggtagagg cagggcagac ggttctccat cgccacttcc tgggcgcgta gatgcttttt
      721 caccgtcatc gggtaatagg tgccgccctt gaccgtggcg tcgttgcaga cgatcgcgca
      781 ttccacgccg ctcacgcggc cgaccccggt gatgacgccc gagcccggcg cctcgttgtc
      841 gtacatgtcg agggcggcga gcggcgacag ttcgaggaag ggcgagccgg gatcgagcag
      901 cgcgcgcacc cgctcgcgcg gcaagagctt gccgcgcgcg acgtggcgct tgcgcgactc
      961 ctcgccgccg cccaggtgga cctgggcggt gcgccgacgc aaatcgtcga ccaggccgcg
     1021 catggcctcg gtattgcgct tgaagatgtc ggagcgggtg tcgacttgcg aagagaggat
     1081 cgtcatggcc gggccaaact gcccggaccg gcgccgaggt gcaaggctta gggcaggcgc
     1141 gacagcgtgc gccagccgac gctttgaccg acgaagccgc gctggttgga gagcgcggcg
     1201 gcaaaatccg gatcgcggtc ggcctgctcc ttgagcacga tatcggcctt gccgcggaac
     1261 gccgtcatga gctcgggcga ccattgcttg atgacgacgc ccgacaccct gagactttcc
     1321 agcgccaggc cctgcaagtg cggcgagcgg ctgagcatcc aggcgatgtt ggcgcggcag
     1381 gccgtttcga tctgcacgcg cagcgacgcc gatagcgctt cccacttgtc cttgcgcatc
     1441 aggaagtcga gcaccgccga gggctgctgc cagcccggca tgtagtaggg caagccaagt
     1501 ttgtcgaagc cgagggcagc atcgatggcg ggcgtcgaca tctcgccgcc atccaccttg
     1561 ccctgctgga gctggtagaa aaattcgccc ggcggcagcg gcaccagggt ggcgcccagc
     1621 cgcgctacga tctcgccgga gaagcgcccg aagcgcagcc gttggccctt gaagtcggcg
     1681 accgtgttga ggtcgctgcg gtaccagccg ccgcccttgg cgccctggat gccgcagggc
     1741 aggcccgcca cgccgagctt gtcgtaagcc tcgcgatgga tgcggctgcc gtcgccttcc
     1801 agcatccacg acgtcatgtc ctccggcccg ggcccgaacg gcacggtggc gaacacgcca
     1861 aacacgggcg ccttggccgc agcatagccg gaccaggtga aagcggcctc gaggtcgccc
     1921 gcgaccacgg cgtcgagcat gtcggcggtc ggcgtaaccc gcccaggttc gatgatcttg
     1981 atggccagcg cgccgccgga catgtgtttt acagtccgtg tgaaaatccg cacggcttcg
     2041 cccgagccgg gcaaggccgg attgaaggcg gtctgcatgt gaaggagccg accgggcggc
     2101 ggcccgagat cggcaggctt atcagcgggt ttgtccttgt ccccggcgac agcgatactg
     2161 gtcgccgcca gcactgcggc ggcgatcccc aggacgacta gattgctacg gcgcacgacc
     2221 gaccatccgt cgcccggctc cccctgtccc caaaaccgct taagcggcct tcttcacacc
     2281 tcgtgagctt cgcacgagga agacggggga acaagcgaaa gacgggcctt acaaagctgc
     2341 caacccacgt ccgatcagga tgcgctgtac gtcgctggtg ccctcgtaga tctggcagac
     2401 gcgaacgtcg cgccagatct tctccaccag gtagtccgag acgtagccgt aaccgccgtg
     2461 gacttgaatc gcggccgagc acacttcctc ggccatctcg gacgcatata gcttggccat
     2521 tgcggcctcc atgaggcagg gacgcttggc gtcgcgcaac gttgccgcat gcagcaccat
     2581 ctgacgcgcc acggcgatct tggtcgccat gtcggcgagg cggaactgga cggcttggtg
     2641 gttcacgatc ttggtgccga acgcctcacg gtcgttggca taggcgtgcg ccgcgtcgaa
     2701 ggcggcgcgc gccatgccga cggcctgggc accgatgccg atgcgaccag cttcgagatt
     2761 ggcgagcgcg atgcgatagc cctcgccttc cgttcccagc agggcgtcgg caccaacggt
     2821 gcactcctcg aacacaatct ggcaggtgtc ggacgatttc tgccccaatt tcttctcgat
     2881 cgaagccacg cgatagcccg gggtcctggt cggcacgatg aagcaggaaa tcccgcgctt
     2941 gacgttggcc tgatcagtca cggcaaagac cagcgccatg tcggcggtgc gaccggaggt
     3001 gatgaactgc ttggtgcca
//
LOCUS       DASWGA010000096         3731 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2416831, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000096 DASWGA010000000
VERSION     DASWGA010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3731
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2416831"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1524
                     /locus_tag="VF991_02255"
     CDS             <1..1524
                     /locus_tag="VF991_02255"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HEX9555286.1"
                     /translation="GDAPQPSSPTDWLFTVPLTPGPYLEGVLTTAVATGLGMLIDARI
                     ALPNISLAFVVPVLIAAARHGLVPSLWVSALSVLAYNFFFLPPLYEFTIHDPANVVAL
                     FFFMFVAIAASALAARTRSQTEAARREARTTAELYAFSRKIAGVVDLYDLLWIVVTHL
                     ARLLNAEIVILMPQEGRLESRAAFPPDSELNAADLAAARWSWDADHPTGRGTDTLPGG
                     RWLFVPIRTSRSPVGVIGVLSLKEGRELRASDRRLLEAVGNQAAVAIERVTLAADIDQ
                     ARLGEERERLRSSMLTSVSHDLRTPLASIIGGLSSLKSYRDRYDEPTRDELLGTALSE
                     AERLDRFVGNLLDMTRLDAGAIVPKREPVDAGDLVSTALRRAMPLLKDKVVVPSVTPD
                     LPPLSLDFVLAEQALFNLLDNAGKYSLSGGRIEIDVKQAGESIEIVVRDEGPGIPTEA
                     LGRLFDKFYRADSDRRRAGTGLGLAIAKGFVEALGGTIAARNRTDRSGAEFIVSYPL"
     gene            1521..2204
                     /locus_tag="VF991_02260"
     CDS             1521..2204
                     /locus_tag="VF991_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9555287.1"
                     /translation="MTGDAATILIVEDEPPIRRLLRTTLAAHDYRPVEAETGAEALSA
                     LRHHRPDLVLLDLGLPDIDGQALIGRIRALSPVPIVILSSRGDEAAKVAALDSGADDY
                     ITKPFGADELLARLRAALRHRLQEQGAERTFTSGDLNVDLVRRLVRRGADDIKLSPKE
                     YDILEQLAIHAGKVLTHKHLLREVWRDESVDPQYLRVYVRQLRQKIETDPSTPRHVLT
                     EPGVGYRLV"
     gene            complement(2335..3285)
                     /gene="dapA"
                     /locus_tag="VF991_02265"
     CDS             complement(2335..3285)
                     /gene="dapA"
                     /locus_tag="VF991_02265"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEX9555288.1"
                     /translation="MKDFITRCHGSSAALPTPYRLGRVDLTALEGLCYRLIDRGTASL
                     APCGTTGEGSLLTPDEHRQVVETTVEAAAGRVPVIAGAGSNNTRVAVELARSAERAGA
                     SALLAVTPFYLKPSQAGIVAHFRAIHDAVGIPVILYDVPSRTGCALDDVTVKRLADLP
                     RIVGLKDATGDIPRVGRLRRRLGNDFLLLSGDDATQAAFRAAGGDGCISVTANVAPAL
                     CAALHRACDDRLTGDIEWYDQVLAPLHAALFLEANPVPLKRALCRLGLMGDSLRLPLT
                     PLSPEFDRKLGQVLDAIAPVEEKEAKRFAAMHPHHAPHAA"
     gene            complement(3313..3516)
                     /locus_tag="VF991_02270"
     CDS             complement(3313..3516)
                     /locus_tag="VF991_02270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555289.1"
                     /translation="MYARSAGGLPWPGHGVSTVFGAVARTALTILCLAAVAAAVPAGR
                     YLVFEYNHGDRQIVQRLFASLLP"
     gene            complement(3517..>3731)
                     /locus_tag="VF991_02275"
     CDS             complement(3517..>3731)
                     /locus_tag="VF991_02275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555290.1"
                     /translation="ERELDDALRAARSRAGASGRVILEGAACRWRNALAAIREHALAA
                     RLDIVSFDHGTRRLVLAPASPLAMAA"
BASE COUNT          579 a         1302 c         1269 g          581 t
ORIGIN      
        1 ggcgatgcgc cgcaaccgtc gagcccgacc gattggctgt tcaccgtgcc gctgacgccc
       61 ggcccctatc tcgagggcgt gctgacgacg gcggtggcga ccgggcttgg catgctgatc
      121 gacgcccgca ttgcgctgcc caacatctcg ctcgccttcg tcgtgccggt gctgatcgcg
      181 gccgcccgcc atggccttgt gccctcgctg tgggtctcgg cgctgagcgt gcttgcctac
      241 aacttcttct tcctgccgcc gctctacgaa ttcaccatcc acgacccggc caatgtcgtg
      301 gcgctgttct tcttcatgtt cgtggcgatc gcagccagtg cgctcgccgc gcgcacgcgc
      361 tcgcagaccg aggcggcgcg gcgcgaggcg cgcaccaccg ccgagctcta cgccttcagc
      421 cgcaagatcg cgggcgtcgt cgacctctac gatctcctgt ggatcgtcgt cacccatctg
      481 gcgcgcctgc tgaatgccga aatcgtgatt ctgatgccgc aggagggcag gctggaaagc
      541 cgcgccgcct tcccgcccga cagcgagctc aacgccgccg atctcgcggc ggcgcgctgg
      601 tcgtgggacg ccgatcatcc gaccggcagg ggcaccgaca cgctgcccgg cgggcgctgg
      661 ctgttcgtgc cgatccgcac cagccgttcg cccgtcggcg tgatcggcgt gctgtcgctg
      721 aaggaggggc gcgaactccg tgcctcggat cgtcgattgc tcgaggcggt gggcaaccag
      781 gccgccgtcg ccatcgagcg cgtgacgctg gcggccgaca tcgaccaggc gaggctgggc
      841 gaggagcgcg agcgcctgcg ctcctccatg ctgacctcgg tctcgcacga cctgcgcacc
      901 ccgcttgcct ccatcatcgg cggactgtcg agccttaaaa gctaccgcga ccgctacgac
      961 gagccgaccc gcgacgagct tttgggcacg gcgctgagcg aggccgagcg gctcgaccgc
     1021 ttcgtcggca accttttgga catgacgcgc ctcgatgccg gcgccatcgt gcccaagcgc
     1081 gagccggtcg atgctggcga cctcgtctcc acggcgctgc gccgcgccat gccgctgttg
     1141 aaggacaagg tcgtcgttcc ctcggtgacg cccgacttgc cgcccttgtc gctcgatttt
     1201 gtgctggccg agcaggccct gttcaatctg ctcgacaatg ccggcaaata ttcactctcg
     1261 ggcggtcgta tcgaaatcga cgtcaagcag gccggcgaat cgatcgaaat cgtcgttcgt
     1321 gacgaagggc caggcattcc caccgaggcg cttggccggc tgttcgacaa gttttaccgg
     1381 gccgacagcg accgccggcg cgccggcacc ggcctgggcc tggccatcgc caagggattc
     1441 gtcgaagccc tgggcggcac catcgccgcg cgcaaccgca ccgatcgcag cggtgcggag
     1501 ttcatcgtaa gctatccgct atgacaggcg atgccgccac catcctgatc gtcgaggacg
     1561 agccgccgat ccgccggctg ctgcggacga cccttgccgc ccacgactat cgcccggtcg
     1621 aggcggagac gggtgcggag gcgctgtcgg cgctgcgcca ccaccggccc gacctggtgc
     1681 tgctcgatct cggcctgccc gacatcgacg gccaggcgct gatcggccgc atccgcgcgc
     1741 tctcgccggt gccgatcgtc atcctgtcga gccgcggcga cgaggcggcc aaggtggccg
     1801 ccctcgattc cggcgccgac gactacatca ccaagccgtt cggcgccgac gagttgttgg
     1861 cccgcttgcg tgccgcgctg cgccaccgcc tgcaggagca gggcgccgag cgcaccttca
     1921 ccagcggcga tctcaatgtc gacctggtgc gccgcctggt gcgccgcggc gccgacgaca
     1981 taaaactctc gcccaaggaa tacgacatcc tcgagcagct cgcgatccac gccggcaagg
     2041 tgctgacgca caagcacctg ctgcgcgagg tgtggcggga cgaatcggtc gatccgcaat
     2101 atctgcgggt ttacgtccgc cagctccgcc agaagatcga gaccgatccc tcgacgccgc
     2161 gccacgtctt gaccgaaccc ggggtgggtt accggctggt gtagacaagt cgctcgacgt
     2221 tgcgatcaga aaagttgtca tcccgagcga agcgagggac ctttaatcgg catcgcggaa
     2281 agttccctcg ctgcgctcgg gatgacagtt ctgggtgtaa cgacttccgt gcacctaagc
     2341 cgcgtgcggc gcgtggtgcg ggtgcatcgc cgcaaagcgc ttcgcttcct tttcttcgac
     2401 gggagcgatc gcatcgagga cctgcccgag cttcctgtcg aactcggggc tgagcggcgt
     2461 caacggcagg cgcaagctgt cgcccatcag cccgagccgg cagagcgcgc gcttcaaggg
     2521 aacgggattg gcctcgagga acagcgcggc atgaagcggg gccagcacct ggtcgtacca
     2581 ctcgatgtcg cccgtcagcc gatcgtcgca ggcgcgatgg agggcagcgc atagcgccgg
     2641 cgcgacattg gccgtgaccg agatgcagcc gtcgccgccc gcggcacgga aggccgcctg
     2701 cgtggcgtcg tcgccggaca gcagcaggaa gtcgttgccc agccggcggc gcaggcggcc
     2761 gacccgcggg atgtcgcccg tcgcatcctt cagcccgacg atgcgtggca gatcggccag
     2821 ccgcttgacg gtgacgtcgt cgagggcgca cccggtgcgc gagggaacgt cgtacaggat
     2881 caccggaatg cccaccgcat cgtggatggc gcggaaatgg gcgacgatgc cagcctggct
     2941 cggcttgaga tagaagggtg tgacggcgag caacgccgaa gcaccggcgc gttcggccga
     3001 gcgcgccagt tccacggcta ctcgcgtgtt gttgctgccg gcgccggcga tgacgggaac
     3061 gcggcccgcc gccgcctcga cggtcgtctc tacgacctgc cgatgctcat ccggggtcag
     3121 caacgagccc tcgccggtcg tgccgcacgg cgccaacgaa gcggtcccgc gatcgatcag
     3181 gcggtagcac aagccttcca gcgccgtgag gtcgacgcgc cccaggcggt acggggtggg
     3241 cagcgccgcg ctggagccgt ggcaacgggt gatgaagtct ttcatgattt gtctccttgg
     3301 gcagggcgcc ggctagggca gcagggaagc gaacaggcgc tgcacgatct gccggtcgcc
     3361 gtggttgtat tcgaacacga gataacgccc ggccgggacg gcggcggcga cggcggccag
     3421 gcacaggatc gtcagcgccg tgcgggcaac ggcgccgaac accgtgctga ccccgtggcc
     3481 gggccatgga aggccgcctg cggaccgggc gtacatctag gccgccatgg cgagaggcga
     3541 cgccggtgcc aacaccaggc ggcgcgtccc atggtcgaag gagacgatgt ccaggcgcgc
     3601 cgccagggca tgctcgcgga tcgcggcaag ggcatttcgc cagcggcagg ccgcaccttc
     3661 caggatgacg cgcccgctcg cgccggcgcg cgagcgcgcc gcccgcaggg cgtcatccag
     3721 ttcgcgctcg t
//
LOCUS       DASWGA010000097         3214 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1532383, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000097 DASWGA010000000
VERSION     DASWGA010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3214
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1532383"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            445..2037
                     /locus_tag="VF991_02280"
     CDS             445..2037
                     /locus_tag="VF991_02280"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9555291.1"
                     /translation="MADYDYIIVGAGSAGGALAARLSENPGNKILLLEAGARSHPYCR
                     MPLSFGLLIENPAANWCYLSEPEPGTANRQIPVPRGKVLGGSSSINGLVWVRGQPLDY
                     DTWAQLGCRGWSWREVAPLFTRIENFVDGDGSNGRGTSGPLKVSTVPDQNPLYDALFA
                     ASKAAGFKLNPDYNSEDQEGVVKTQTSIYKGRRMSVAHCYIEPAMKRSNLQVVTNAHT
                     LRVLLDGKRCIGVEYEKDGKVVQARARETVLSAGGVASPQILELSGIGQPELLKKHGI
                     EVKHELNSVGENFRDHINARIIWKVKDRRVSYNHMARGMGAVTQMMKYLATGGGFMSL
                     PSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSI
                     HVRSADAKAQPAIRFNFLADPIDQQAMVRGFRLMRQIVDAAPMDAYRGEEFSPGPSVA
                     SDGEILAWIRNNSQTAYHPIGTCRMGPGPNAVVDDKLKVHGLEGLRVADASIFPTMPS
                     GNTNAPSIMVGEKAADILKAAA"
     gene            2120..2998
                     /locus_tag="VF991_02285"
     CDS             2120..2998
                     /locus_tag="VF991_02285"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX9555292.1"
                     /translation="MSATAKAEGPIPGLPGDGSFYKDVRQTLRSLCPQALLNWREARF
                     YGRYGEVELHLLQFLCQRDRDAIDVGANDGSYVHYLRRHAKRVIAFEPMPVLARALRR
                     KFRRGVVVESMALSDGAGTVSLRMPVVDGVVVTGCSTVSSTASATYPGHRAIDVPMDR
                     LDSVYSGDVGFIKIDVEGHEQAVLDGAVETVRRCRPRLLVEVDERLSPGGLARAKAYF
                     RDLGYRGYYVRQGRLEPIDRFSTEELQKPANLPDLTAPLQQRERFGRYIYNFIFLPPG
                     EPTETLRRLSDRLTQL"
     gene            complement(2928..>3214)
                     /locus_tag="VF991_02290"
     CDS             complement(2928..>3214)
                     /locus_tag="VF991_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555293.1"
                     /translation="ALPGMPLEDGHSIGLFDSHTALSEGVVKLIDDFPALNARHERAY
                     AACADRFDWDRIGRRLVAEMGGGADRRVRAGSDDRTADAMSRSARLVAGK"
BASE COUNT          573 a         1094 c         1042 g          505 t
ORIGIN      
        1 atcgtgatcg acggcggcaa gatgctgcag tcgggcggcg gcggcgccag caccggccag
       61 atgctcgatt ggaccgacga gcagtgggaa gcgatccggc cgaagaagaa gcagtaggtc
      121 agtttcgctg tcttgattgt ccaccggccg gtctcttagc ctcggcgaac accgcagcag
      181 gaggtaggga aagcctatga ctcctaaccg ggcataaaac ggtgacgcgg caccgacaac
      241 tccgcgaccc gcccgtcccc ggcagccgca acgccggccc gccgacctcc tgaaatcagg
      301 gaggggacca tgtccctaac gaaccccgct cgctgcccgt gggcggggtt ctgtttgccg
      361 ccgatattcc ccccttcacg cgtgccagag gtgcgctagg ctggcaggaa ggcaccaagc
      421 cgtgaccggg aggacgcaaa gaccatggcc gattacgact acatcatcgt cggcgcgggc
      481 tcggccggcg gggcgctggc ggcgcggctc agtgaaaacc ccggcaacaa gatcctgctg
      541 ctcgaggccg gcgcgagaag ccatccctac tgccgcatgc cgctttcctt cgggctgctg
      601 atcgagaatc ccgccgccaa ctggtgctac ctgtccgagc ccgagccggg cacggccaat
      661 cgccagatcc cagtgccgcg cggaaaagtg ctgggcggct cgagctcgat caacggcctg
      721 gtctgggtgc gcggccaacc gctcgattac gacacctggg cgcagttggg ctgccgcggc
      781 tggagctggc gcgaggtcgc gccgctgttt acccggatcg agaacttcgt cgacggcgac
      841 ggcagcaacg gccgcggcac gtcgggcccg ctcaaggtct cgaccgtgcc cgaccagaac
      901 ccgctctacg atgcgctgtt cgcggcgtcc aaggcggccg gcttcaagct caatcccgac
      961 tacaacagcg aggaccagga gggcgtggtc aagacgcaga cctcgatcta caagggccgg
     1021 cgcatgagcg tggcccattg ctacatcgag cccgccatga agcggtcgaa cctgcaggtg
     1081 gtcaccaacg cccacaccct gcgcgtcctg ctcgacggca aacgctgcat cggcgtcgag
     1141 tatgagaagg acggcaaggt cgtgcaggcg cgcgcccgcg agaccgtgct gtcggccggc
     1201 ggtgtcgcca gtccgcagat cctggaactc tccggcatcg gccagcccga actcctgaag
     1261 aagcacggca tcgaggtcaa gcacgagctc aattccgtcg gcgagaattt ccgcgaccac
     1321 atcaacgccc gcatcatctg gaaggtgaag gatcggcgcg tctcctacaa ccacatggcg
     1381 cgcggcatgg gcgccgtcac ccagatgatg aagtacctcg ctacgggcgg cggcttcatg
     1441 agcctgccgt cggcgccatt gctcgccttc ctcaagacac ggccggagct ggcgacgccc
     1501 gacgtgcaga tgcatctggt gccctattcg atcaaggacc ccaagacccg caagctgcag
     1561 gatttcccgt cgatgaccat cgcctgctac cagctccgcc ccgagagcct gggctcgatc
     1621 catgtccgct cggccgatgc caaggcgcag ccggcgatcc gcttcaattt cctggccgac
     1681 ccgatcgacc agcaggcgat ggtgcgcggc ttccgcctga tgaggcagat cgtcgatgcc
     1741 gcaccgatgg atgcctatcg cggcgaggaa ttctcgcccg gcccgtcggt cgccagcgat
     1801 ggcgagatcc tggcctggat caggaacaat tcgcagaccg cctaccatcc gatcggcacg
     1861 tgccgcatgg ggccggggcc gaacgcggtg gtcgacgaca agctcaaggt gcacgggctc
     1921 gaagggctgc gcgtggccga cgcctcgatc ttcccgacca tgccgtcggg caacaccaac
     1981 gcaccctcga tcatggtcgg cgagaaagcg gccgacatcc tgaaagcggc agcgtagtcc
     2041 gccgcatatc accgcctgat caccgcgcaa cggcccgcgg gcacactatt ttgctctctc
     2101 gacataacgc gagggcacca tgagcgcgac cgccaaggcc gaaggtccga ttcccggttt
     2161 gccgggggac ggcagttttt acaaggacgt ccgccagacc cttcgatcgc tctgcccgca
     2221 ggccctgctc aactggcggg aagcgcgctt ttacgggcgt tacggcgagg tcgagctgca
     2281 cctgctccaa ttcctgtgcc aacgcgatcg cgacgccatc gatgtcggcg ccaatgacgg
     2341 cagctacgtg cattatctga ggcggcacgc gaaacgggtc atcgccttcg agccgatgcc
     2401 ggtcctcgcc cgcgcgctgc gccgcaagtt ccgacgcggc gtcgtggtcg agtcgatggc
     2461 gctgtccgat ggcgcgggca cggtttcgct gcgcatgccg gtcgtcgacg gcgtggtggt
     2521 gaccggctgc tcgacggtct cgtcgacggc atcggccacc taccccggcc atcgcgccat
     2581 cgacgttccg atggaccgcc tcgacagcgt ctatagcggc gacgtgggct tcataaagat
     2641 cgacgtcgag ggccacgagc aggccgtgct ggacggcgcg gtggagacgg tccggcgctg
     2701 ccggccgcgc ctgctggtcg aggtcgatga acgcctctcg ccgggcggat tggcccgcgc
     2761 caaggcctat ttcagggatc tcggctatcg cggctactac gtgcgccaag gacggctcga
     2821 gccgatcgac cgcttttcga ccgaggagct gcagaagccc gccaacctgc ccgacctgac
     2881 ggcgccgctg cagcagcgtg agcggttcgg acgctacatc tacaatttca ttttcctgcc
     2941 accaggcgag ccgaccgaga cattgcgtcg gctgtccgat cgtctgaccc agctctgacc
     3001 cgccggtcgg cgccgccgcc catctccgcc acgaggcggc ggccgatgcg gtcccagtcg
     3061 aaacgatcgg cacaggcggc gtaagcgcgt tcgtggcggg cattgagagc gggaaaatcg
     3121 tcgatcaatt tgacgacgcc ttcggacagc gcggtgtggc tgtcgaacag gccgatgctg
     3181 tggccgtcct ccagcggcat gcccggcagg gcga
//
LOCUS       DASWGA010000098         1506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1653190, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000098 DASWGA010000000
VERSION     DASWGA010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1653190"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            359..>1506
                     /locus_tag="VF991_02295"
     CDS             359..>1506
                     /locus_tag="VF991_02295"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006174313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEX9555294.1"
                     /translation="MHQILRQLEEKRAGARAGGGERRIQAQHAKGKLSARERLELLFD
                     PDSFEEWDMFVEHRSHDFDMAEQKVPGDGVVTGYGTVNGRLVFAFSQDFTVFGGSLSE
                     AHAEKICKVMDQAIKVGAPVVGLNDSGGARIQEGVASLAGYAEVFQRNVLASGVVPQV
                     SLIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPDVVKTVTHENVTQEELGGAVTHT
                     TRSGVADLALENDVEALLQLRRFIDFLPASNREKPPVRPTWDTPDRVEPSLDTLIPAS
                     ANKPYDMKELITKVVDEGDFFELQPSFARNIIVGFARMEGSTIGIVANQPMVLAGCLD
                     IDSSRKAARFVRFCDCFNIPIITFVDVPGFLPGTAQEYGAIIKHGSKLL"
BASE COUNT          241 a          526 c          485 g          254 t
ORIGIN      
        1 caggccgcca aaccgacggt cgtcaccgca agaagcgaag cgataacggt tcttgccgtc
       61 acgaggatct cccgccgcgt aacgaccgtc gcccatttcc actcccaccg gttccctctc
      121 gccatcgctc ttttcccttc gtggatcggc acgccatcgc ttagcggcgc tctcggaggg
      181 cgagcctagg gccgatcgcg tttacgattt cctagcgccg gcaccgcgcc ggcgcctccc
      241 ccgccgtcga ccggctggcc cgtaaggcgc gggaagcgcg ggctggcgct catcggcggt
      301 tggtgttatg tcccgagccg gccccttcct gcggggcggc agagagcggt ttgaggccat
      361 gcatcagatc cttcgccagc tcgaggagaa gcgcgcgggc gcgcgcgccg gcggcggcga
      421 gcgccgcatc caggcgcagc acgccaaggg caagctcagc gcgcgcgagc gcctcgagct
      481 gctgttcgat cccgactcct tcgaggagtg ggacatgttc gtcgagcacc gcagccacga
      541 tttcgacatg gccgagcaga aggtgcccgg cgacggcgtc gtcaccggct acggcacggt
      601 caacggccgc ctcgtcttcg ccttcagcca ggatttcacc gtgttcggcg gctcgctctc
      661 cgaggcgcat gccgagaaga tctgcaaggt gatggaccag gcgatcaagg tcggcgcgcc
      721 agtcgtcggg ctcaatgatt ccggcggcgc gcgcatccag gagggcgtcg cctcgctcgc
      781 cggctatgcc gaggtgttcc agcgcaacgt gctcgcctcg ggcgtggtgc cgcaggtctc
      841 gctgatcatg ggcccctgcg ccggcggcgc cgtctattcg ccggccatga ccgacttcat
      901 cttcatggtg aaggacagct catacatgtt cgtcaccgga cccgacgtgg tgaagacggt
      961 gacgcatgag aatgtcacgc aggaggagct gggcggcgcg gtcacgcaca cgacgcgctc
     1021 gggcgtcgcc gacctcgcgc tcgagaacga tgtcgaggcg ctcttgcagc tgcgccgctt
     1081 catcgatttc ctgcccgcct ccaaccgcga gaagccgccg gtgcggccga cctgggacac
     1141 gcccgaccgc gtcgagccgt cgctcgacac gctgatcccg gccagcgcca acaagcccta
     1201 cgacatgaag gagctgatca ccaaggtggt cgacgagggc gatttcttcg agctgcagcc
     1261 gagcttcgcc cgcaacatca tcgtcggctt cgcgcgcatg gagggctcga ccatcggcat
     1321 cgtcgccaac cagccgatgg tgctggccgg ctgcctcgac atcgacagct cgcgcaaggc
     1381 ggcgcgcttc gtgcgcttct gcgactgctt caacatcccc attattactt tcgtcgacgt
     1441 gccgggattt ctcccgggca cggcgcagga atacggcgcc atcatcaagc acggctcgaa
     1501 gctgct
//
LOCUS       DASWGA010000099         7839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_140017, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000099 DASWGA010000000
VERSION     DASWGA010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7839
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140017"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="VF991_02300"
     CDS             <1..311
                     /locus_tag="VF991_02300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004688981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX9555295.1"
                     /translation="EEARKAGREVHTALFPFQANGRALTLGEEDGFVRVIARADNHVM
                     LGIAAVGAGVSELATAFGLALEMGARLEDIGGTIHAHPTLGEAFHEASLRALGEALHI
                     "
     gene            complement(435..1412)
                     /locus_tag="VF991_02305"
     CDS             complement(435..1412)
                     /locus_tag="VF991_02305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555296.1"
                     /translation="MLVRMLRDATLRTAPQHKVFAEDRTLAIPFVAKRTPKRFQLDAL
                     TLASAIVNFPGNRWEDTAMIARPHTAVASLFISLFLAPGPTSAQRLDEQVAAVAAGIT
                     AKAVTVVASRLPVDALIVEAIKRISERDYQFGTLFAPPAATDELDCSGVRSCDGDRST
                     LQKVDVNGDQTRDFSAWQQLMVKEGAKYFSQLETIDGFWKTKKKLIVDTIDALAPEQR
                     ARTIKALDATLYAMTLYVVDRDGIQQAFMDRKAAYDLWNRERGLRARTLHEAQDRLAD
                     RMKKLEIDADKLNLADKLWTAGGEPLLAAILKVGNDLRQEVNSRSARTQ"
     gene            complement(1487..2542)
                     /locus_tag="VF991_02310"
     CDS             complement(1487..2542)
                     /locus_tag="VF991_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEX9555297.1"
                     /translation="MTYIAKPRLHHPSLVKNKAGYTRRDYEGAVSTLCAGCGHDSISA
                     AIIQACYELDILPHRVAKLSGIGCSSKAPTYFVGASHGFNTVHGRMPSVVTGANLANR
                     DLIYMGVSGDGDSASIGLGQFAHIMRRGVNMTYIVMNNGVYGLTKGQFSATADKGSIS
                     KKGVANSEESIDLVSLAILMGATLVARSFSGDKHQLVPLIKAAMDHKGAAFLDVVSPC
                     VAFNNHSGSTKSYDYVREHNEAMNRIDFIESREEITTSYAPGTLRTVQQHDGSLLRLR
                     KLGEEYDPSDKIAAMKRVQEGLAAGEVVTGLLYVDPSPKDLHDHLNTVAAPLNTLDTP
                     DLCPGPSALERINAGLR"
     gene            complement(2539..4383)
                     /locus_tag="VF991_02315"
     CDS             complement(2539..4383)
                     /locus_tag="VF991_02315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HEX9555298.1"
                     /translation="MPQALAAVNDFVVKFANVNGSGSASANELFARAILRMGVPVSPR
                     NIFPSNIQGLPTWYEVRVTEKGYLGRRGGVDLMVAMNPQTWAEDVKEIEPGGYLFYDS
                     TKPMPSSMFREDINIVGVPLTAITNATYTDARQRQLFKNIIYVGALSVLLDIDDNEIK
                     RLFGEQFKGKEKLLDSNVKALNLGRDWVKQHVDPDLVKLKVRRADTVGDRIFVEGNNA
                     AALGAVYGGATVCAWYPITPSSSLAEAFQGHCMRLRHDKETGKAKYAIVQAEDELASI
                     GIVIGAGWNGSRAFTSTSGPGISLMTEFIGLASFAEVPAVIIDVQRGGPSTGMPTRTQ
                     QSDLLSCAYASNGDTKHVLLFPEDPKECFDFTADALDLADRLQTPVFVMSDLDIGMNH
                     RLCHPFQWDDKRAYDRGKVMTAAELDAGKNFGRYLDVDGDGIPFRTYPGTHPTRGSYL
                     TRGTTKDEYARYSEEGPVYVRNMERLQKKFDTARKIAPQPLRYSAPKPTRYGVIYFGS
                     TSPAMDEALDHLEADGHHVNGLRVRAFPFAQAVEDFIREHDRVFVVEQNRDGQLRSML
                     MTEFSLDARKLVPVLHYDGTPITARFIAADIAKKLGQLKVVSFEKAAS"
     gene            complement(4368..6182)
                     /locus_tag="VF991_02320"
     CDS             complement(4368..6182)
                     /locus_tag="VF991_02320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9555299.1"
                     /translation="MKPTDITNPDYFHKVVDCQWACPAHTPVPEYIRLIAHGRYSDAY
                     MINWKSNVFPGILGRTCDRPCEPACRRSRVEDETLVKGKKEPVAICRLKRVAADYKDD
                     EGIKAAMPTAPAKNGKRIACIGGGPASLTVARDLAVLGYEIVIYDQDPKLGGFIRTQI
                     PHFRLPESVIDEEVGYITAIGNIEFRHKKIDSMKAILAEGYDAVFVGSGAPRGRDLDV
                     PGRQEAASNIHIGLDWLSSVSFGHISKVGKRVIVLGGGNTAMDCCRTARRLGGEDVKV
                     IVRSGFEEMKASPWEKEDAMGEDIPILNFLVPKEVTHKDGKITGVLFEKVRAEYDAKG
                     RRSLVPSGEPDQHFECDDVLVAIGQENAFPWIEKDSGVEFDKWGLPKLNEQTLQSTEP
                     KVFFGGDAAFGPKNIIWAAAHGHDAAISIHKMLIGEDVTERPAPGVNIVSQKMGIHEW
                     SYDNAPTIDHRLKVPHRAKQEALKDIMAEVELGFDPQLAFKEAQRCLNCDVQTVFAGT
                     LCIECDACVDICPMDCISFTENGEEKDLRARLMAPALNPTQDLYIGNDLKTGRVMVKD
                     EDVCLHCGLCAERCPTGAWDMRKYYMEMTNAEHACRKH"
     gene            complement(6351..7130)
                     /locus_tag="VF991_02325"
     CDS             complement(6351..7130)
                     /locus_tag="VF991_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9555300.1"
                     /translation="MSQISQKSTNPADYQRVPRAVAAMPKDFPQDFVIEPHSHERAQL
                     IFATAGTMRVVTGPAMWIVPPQRALWMPAGAVHGIEMLDQVSMRTLYLRDDAAATMPA
                     SCRVLQVSPLLRELIVRATELPLHYDEEGAAGHLVALLLAELHGSQTLGLHLPMPHSQ
                     RLAMLCRALLDDPGDRRTLGQWAQTLNTSERTLARLFQKETSLSFAAWRQQARVLEAM
                     GRLGGGAPVTQVALDLGYDSVSAFSAMFRRAAGASPSTYRA"
     gene            7208..>7839
                     /locus_tag="VF991_02330"
     CDS             7208..>7839
                     /locus_tag="VF991_02330"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9555301.1"
                     /translation="MSHGSPTSILLNIGHAMDHWILVVFAYSWGVIAGVWGVEWTELT
                     PFNYGALFMFGAGSIVSGRLGDHWGRWIMMVIFFAGLGVSALVIALCTNKWQIGAALT
                     LMGAFASIYHPVGIPMLVQKAKNFGFTIGLNGLAGNMGIAIAAGVSVYIAQRFGWQMA
                     FVLPGVISLVSAAAFVLLVPREAEAPAKRQPKMIDLPPRVMARVFAIMTFT"
BASE COUNT         1280 a         2439 c         2667 g         1453 t
ORIGIN      
        1 ccgaggaggc gcgcaaggcc ggccgcgagg tgcacactgc cctgttcccg ttccaggcca
       61 acggccgcgc cctgaccttg ggcgaggagg acggcttcgt gcgcgtgatc gctcgcgccg
      121 acaaccacgt gatgctcggc atcgccgcgg tcggcgcggg agtgtcggag ctcgccaccg
      181 ccttcggcct cgcgctcgag atgggcgcgc ggctggaaga tatcggcggc accatccatg
      241 cccatccgac cctcggcgag gccttccacg aagcaagcct gcgggcgctg ggcgaggccc
      301 tgcatatctg aaagtctgtc atcgcgcgcg gggtaacccc cgcgctgaag cggagcgaag
      361 gatctcgtgc ccgtggcaac tggcgatgag gtccttcgct gcgctcagca cgacagcggc
      421 gacacagcgc gagactattg cgtgcgggcg cttcgcgaat tgacctcttg ccgcaagtcg
      481 ttgccgactt tcaggatcgc ggcaagcaac ggctcgccgc cggccgtcca tagcttgtcg
      541 gcaaggttga gcttgtcggc atcgatctcg agcttcttca ttctgtcggc cagccggtcc
      601 tgcgcctcgt gaagtgtccg cgcccgcagg ccgcgttccc tgttccacag gtcataggca
      661 gccttgcggt ccatgaaggc ctgctggatg ccatcgcggt cgacgacgta cagggtcatg
      721 gcgtacagcg tggcatcgag cgccttgatg gtgcgcgccc gctgctcggg ggccagggca
      781 tcgatggtat cgacgatcag cttcttttta gtcttccaaa agccgtcgat cgtctccagc
      841 tgggaaaagt atttcgcgcc ttccttcacc atcaattgct gccaggccga aaagtcccgt
      901 gtttggtcgc cgttgacgtc gactttctgg agcgtgctgc ggtcgccatc gcaggaacgg
      961 acgccactgc aatccagttc atcggtcgcg gccggcggag cgaacagcgt gccgaactgg
     1021 tagtcgcgct ccgagatccg cttgatcgcc tcgacgatca gggcatcgac aggaagcctg
     1081 ctggcgacga cggtgaccgc cttggcggtg atccccgcgg ccacggcggc cacctgctca
     1141 tccaggcgct gcgccgaggt ggggccaggc gcaagaaaaa gagaaatgaa gaggctggca
     1201 acggccgtat ggggacgagc gatcattgcg gtatcttccc atcgatttcc gggaaaattg
     1261 acgatcgcgc ttgcgagcgt caatgcatcg agctgaaacc tttttggggt gcgctttgcg
     1321 acaaagggaa tcgctagcgt ccgatcttca gcaaagacct tatgctgagg agccgtacga
     1381 agcgtggcgt ctcgaagcat gcgcacgagc atgtccgcgt tgcccaccct tcgagacgcg
     1441 gcctgcgggc cgctcctcag ggtgaggtaa attcgtcgga aagactctaa cgcagtcctg
     1501 cgttgatgcg ctcgagcgcc gacggaccgg ggcagaggtc gggcgtgtcg agcgtgttga
     1561 gcggcgcggc gaccgtgttg agatgatcgt gcaggtcctt cgggctcgga tcgacgtaca
     1621 gcagaccggt cacgacctcg cccgccgcca ggccctcctg cacgcgtttc atcgccgcga
     1681 tcttgtcgga gggatcgtac tcctcgccga gcttgcgcag gcgcaggagc gagccgtcgt
     1741 gctgctgcac ggtcctgagc gtgccgggtg cgtaggaggt ggtgatctcc tcgcggctct
     1801 cgatgaaatc gatgcggttc atcgcctcgt tatgctcgcg cacgtagtcg tagctcttgg
     1861 tcgagccgga atggttgttg aaggcgacgc acgggctgac gacgtcgagg aaggcggcgc
     1921 ccttgtggtc catcgccgcc ttgatcagcg gcaccagctg gtgcttgtcg cccgagaagg
     1981 agcgggcgac cagggtggcg cccatcagga tggcgagcga cacgaggtcg atcgactcct
     2041 cggaattggc gacgcccttc ttgctgatcg aacccttgtc ggcggtggcc gagaactggc
     2101 ccttggtcag gccgtagacg ccgttgttca tgacgatgta ggtcatgttg acgccgcggc
     2161 gcatgatgtg ggcgaactgg ccgagcccga tcgaggccga atcgccgtcg cctgagacgc
     2221 ccatgtatat gaggtcgcgg ttggcgaggt tggcgccggt caccaccgag ggcatgcggc
     2281 cgtgcacggt gttgaagccg tggctggcgc cgacgaaata agtcggcgcc ttggacgagc
     2341 agccgatgcc ggagagcttg gcgacgcgat gcggcaggat gtcgagctcg tagcaggcct
     2401 ggatgatggc ggcgctgatc gaatcgtggc cgcagccggc gcacagggtg gagaccgcgc
     2461 cttcatagtc gcggcgggtg tagccggcct tgttcttgac cagcgaggga tgatgcagcc
     2521 ggggcttggc gatataggtc atgacgccgc cttttcgaat gaaaccacct ttagctggcc
     2581 gagcttttta gcaatgtcgg ccgcgatgaa gcgcgccgtg atcggcgtgc cgtcgtagtg
     2641 caggaccgga acgagcttgc gcgcatcgag cgagaactcg gtcatcagca tggagcgcag
     2701 ttgcccgtca cgattctgct cgaccacgaa cacgcggtcg tgctcgcgga tgaaatcctc
     2761 gaccgcctgg gcgaacggga aagcgcgcac gcgcaggccg ttgacgtgat ggccgtcggc
     2821 ctcgagatgg tcgagcgcct cgtccatcgc cgggctggtc gagccgaaat agatcacacc
     2881 gtagcgcgtc ggcttgggcg cggagtagcg cagcggctgc ggcgctatct tgcgcgcggt
     2941 gtcgaacttc ttctgcagcc gctccatgtt gcggacatag accgggcctt cctcggagta
     3001 gcgcgcatac tcgtccttgg tcgtgccgcg ggtgaggtac gagccgcgag tcggatgggt
     3061 gccgggatag gtgcggaacg ggatgccgtc gccgtcgacg tcgagatagc ggccgaaatt
     3121 cttaccggcg tcgagctcgg ccgcggtcat caccttgccg cggtcgtagg cgcgcttgtc
     3181 gtcccactgg aagggatggc acagtcggtg attcatgccg atgtcgaggt cgctcatgac
     3241 gaacaccggc gtctgcagcc ggtcggcgag gtcgagcgcg tcggcggtga agtcgaagca
     3301 ctccttgggg tcctcgggga acagcagcac gtgcttggtg tcgccgttgg aggcgtaggc
     3361 gcaggacagc aggtcggact gctgggtgcg cgtcggcatg ccggtcgacg gcccgccgcg
     3421 ctgcacgtcg atgatcaccg ccggcacctc ggcgaaggag gcgagcccga tgaactcggt
     3481 catcagcgag atgccggggc cggacgtgct ggtgaaggcg cgcgagccgt tccagccggc
     3541 gccgatcacg atgccgatcg aggcgagctc gtcctcggcc tggacgatgg cgtacttggc
     3601 cttgccggtc tccttgtcgt gccgcagccg catgcaatgg ccctggaagg cctcggcgag
     3661 cgaggaggag ggcgtgatgg gataccaggc gcacactgtg gcgccgccat agaccgcgcc
     3721 caacgccgcg gcgttgttgc cttcgacgaa gatgcggtcg cccacggtgt cggcgcggcg
     3781 caccttcagc ttcaccaggt caggatcgac gtgctgcttg acccagtcgc ggccgagatt
     3841 gagcgccttg acgttggagt ctaaaagctt ctccttgccc ttgaactgct cgccgaacag
     3901 ccgcttgatc tcgttgtcgt cgatgtcgag cagcactgac agcgcgccga catagatgat
     3961 gttcttgaac agctggcgct ggcgggcgtc ggtgtaagtg gcgttggtga tggcggtcag
     4021 cggcacgccg acgatgttga tgtcctcgcg gaacatcgac gacggcatcg gcttggtgct
     4081 gtcgtagaac aggtaaccgc cgggctcgat ctccttgacg tcctcggccc aggtctgcgg
     4141 gttcatggcg accatcaggt cgacgccgcc gcgccggccg agataaccct tctcggtgac
     4201 cctgacctcg taccaggtcg gcaggccctg gatgttggag ggaaagatgt tgcgcgggct
     4261 gaccggaacg cccatgcgca ggatggcgcg cgcgaacagc tcgttggcgg aggccgatcc
     4321 ggaaccgttg acgttcgcga acttgacgac gaagtcgtta acggcggcta gtgcttgcgg
     4381 catgcgtgct ccgcgttggt catttccatg tagtacttgc gcatgtccca cgcgccggtc
     4441 gggcagcgct cggcgcacag cccgcaatgc aggcagacgt cctcgtcctt gaccatgacg
     4501 cggccggtct tgaggtcgtt gccgatatag aggtcctggg tcggattgag cgccggcgcc
     4561 atcagccgag cccgcagatc cttctcctcg ccgttctcgg tgaagctgat gcaatccatc
     4621 gggcagatgt cgacgcaggc gtcgcactcg atgcagagcg tgccggcaaa caccgtctgc
     4681 acgtcgcagt tcaggcagcg ctgcgcctcc ttgaaggcga gctggggatc gaagcccagc
     4741 tcgacctcgg ccatgatgtc cttcagcgcc tcctgcttgg cgcggtgcgg gactttcagg
     4801 cggtggtcga tggtcggcgc gttgtcgtag ctccactcgt ggatgcccat cttctggctg
     4861 acgatgttga cgcccggcgc cggccgttcc gtgacatcct cgccaatgag catcttgtgg
     4921 atggagatcg cggcgtcatg gccgtgtgcg gcggcccaga tgatgttctt gggaccgaag
     4981 gccgcgtcgc cgccgaagaa caccttgggt tcggtgctct gcagggtctg ttcgttgagc
     5041 ttgggcaggc cccacttgtc gaactcgacg ccggaatcct tctcgatcca cggaaaggcg
     5101 ttctcctggc cgatcgccac cagcacgtcg tcacattcga aatgctggtc gggctcgccc
     5161 gacggcacca ggctgcggcg gcccttggcg tcgtactcgg cgcgcacctt ctcgaacaag
     5221 acgccggtga tcttgccgtc cttgtgggtc acttccttgg ggaccaggaa gttcaggatg
     5281 gggatatcct cgcccatcgc gtcttccttc tcccacggcg aggccttcat ctcctcgaag
     5341 cccgagcgga cgatcacctt gacgtcctcg ccgcccaggc gccgcgcggt gcggcagcaa
     5401 tccatcgcgg tgttgccgcc gcccagcaca atcacccgct tgccgacttt gctgatgtgg
     5461 ccgaacgaga ccgacgacag ccagtcgaga ccgatatgga tgttgctggc cgcttcctgg
     5521 cggcccggca cgtcgagatc gcggccgcgc ggcgcgcctg agccgacaaa caccgcgtcg
     5581 tagccttcgg ccaggatcgc cttcatcgag tcgatcttct tgtggcggaa ctcgatgttg
     5641 ccgatggcgg tgatgtagcc cacttcctcg tcgatcaccg actcgggcag gcggaaatgc
     5701 gggatctggg tgcggatgaa gccgccgagc ttgggatcct ggtcatagat cacgatctcg
     5761 tagcccagca ccgcgaggtc gcgcgccacg gtgagcgagg cggggccgcc gccgatgcag
     5821 gcgatgcgct tgccgttctt cgccggcgcc gtgggcatgg cggccttgat gccctcgtcg
     5881 tccttgtagt cggcggcgac gcgcttcagg cggcagatcg cgaccggctc cttcttgccc
     5941 ttgaccaggg tctcgtcctc gacccggctg cgccggcagg ccggctcgca ggggcggtcg
     6001 caggtgcggc ccaggatccc cgggaagacg ttggacttcc agttgatcat gtaggcgtcg
     6061 gagtagcgcc cgtgggcgat cagccggatg tactcgggga ccggggtgtg ggcggggcaa
     6121 gcccactggc agtcgacgac cttgtggaaa tagtccggat tcgtgatgtc ggtcggcttc
     6181 aacgcaaact ccaggcgcca gtcacgggcc gggtaaatga cagtttagaa tacccgaaaa
     6241 taggtcgcgc attggggata tttgagggcg ttccgtcaag gcttcgatga ggcaagcgat
     6301 tgcagaaaca caaaaattcc ccatgcccta caagggctat cggtcgacct ctacgcacga
     6361 taggtgctgg gcgacgcgcc cgccgcgcgg cggaacatgg cgctgaaggc gctcacgctg
     6421 tcgtagccga gatcgagcgc gacctgggtg accggcgcgc cgccgcccag ccggcccatc
     6481 gcttccagca cgcgcgcctg ctggcgccag gcggcaaaac tgagcgaagt ctccttctgg
     6541 aacagccgcg ccaaggtgcg ctcgctggtg ttcaacgtct gcgcccattg gccaagggtg
     6601 cggcggtcgc ccgggtcgtc gagcagcgcg cggcagagca tcgccaatcg ctgtgagtgc
     6661 ggcatcggca aatgcaggcc gagcgtctgc gagccgtgca gctcggccag cagcagggcg
     6721 acaagatggc ccgccgcgcc ctcttcgtcg tagtgcaggg gcagctccgt tgcccgcacg
     6781 atcagctcgc gcaagagcgg cgagacctgc agcacccggc aggacgcagg catggtggcg
     6841 gctgcatcgt cgcgcaggta gagggtgcgc atggagacct ggtccagcat ctcgatgccg
     6901 tggacagcgc cggcaggcat ccacagcgcg cgctgcggcg gcacgatcca catcgccggc
     6961 ccggtcacca cccgcatcgt gccggccgtg gcgaagatga gctgggctcg ctcatggctg
     7021 tgcggctcga tgacgaagtc ctgtggaaag tccttgggca tggccgccac cgcgcgcggc
     7081 acgcgctgat aatcggcggg attggtggat ttttggctga tttgcgacat aagttggcag
     7141 tctagcgcaa gacggacaaa aagggaataa gtacgctgat ggtgcgcact tattcacgag
     7201 agcccgcatg agccacggca gcccgacctc gatcctgctc aatatcggcc atgccatgga
     7261 tcactggatc ctggtggtgt tcgcctacag ctggggcgtg atcgccggcg tctggggcgt
     7321 cgaatggacc gagctcacgc cgttcaatta cggcgcgctg ttcatgttcg gcgccggctc
     7381 gatcgtcagc ggccggctgg gcgatcattg gggccgctgg atcatgatgg tgatcttctt
     7441 cgccggcctc ggcgtctcgg cgctggtgat cgcgctctgc accaacaagt ggcagatcgg
     7501 cgcggcgctc accctgatgg gcgccttcgc ctcgatctac catccggtcg gcatcccgat
     7561 gctggtgcag aaggccaaga atttcggctt caccattggc ctcaacgggc tggccggcaa
     7621 catgggcatc gccatcgccg ccggcgtctc ggtctatatc gcccagcgct tcggctggca
     7681 gatggcgttc gtcctgcccg gcgtgatctc tctcgtcagc gcggcggcct tcgtcctgct
     7741 ggtgccgcgc gaagccgaag cgcccgccaa gcgccagccc aagatgatcg atctgccgcc
     7801 acgggtgatg gcgcgcgtgt tcgccatcat gaccttcac
//
LOCUS       DASWGA010000100         2743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_266648, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000100 DASWGA010000000
VERSION     DASWGA010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266648"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="VF991_02335"
     CDS             <1..311
                     /locus_tag="VF991_02335"
                     /inference="COORDINATES: protein motif:HMM:NF022447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2817 domain-containing protein"
                     /protein_id="HEX9555302.1"
                     /translation="ASQARDGLGHYGLNRILREPATRLTMCTLEFGTFDRESGQKAFR
                     ADHWLHKYGDPLGNEAGPVRTAMRRQFYPETDDWKEAVLFRGHQVVRQAIAGVRRGAP
                     "
     gene            390..2327
                     /locus_tag="VF991_02340"
     CDS             390..2327
                     /locus_tag="VF991_02340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555303.1"
                     /translation="MLRALVALLAFAGVAALNLLWWWWPNRPVEIAGWTTAPLQSVSF
                     APYRPGQSPLSRTFPTPDQIDDDLHRLQGKVRAVRTYSAGENLEAVPQRAGKYGLKVW
                     HSAWLNNNEKENLEQINLLIDHANKYKDTVERVIVGNEVLLRKDLTANELRRYIRQVK
                     QRVSQPVTYADVWEFWLRNPSLADEVDFITIHILPYWEDEPIGLDRREADGTPSIEKH
                     IVDIYKKVQARFPGKTIVIGETGWPSDGRMRSDARPGRVEQVRYFSTFRTIAEREKFD
                     YNVVEAFDQYWKARQEGTVGAAWGLLDAQRHDKFELGKPVVAEPNWRMLYILSTLASG
                     LMLMGFVSLRRQTKGKAVAIFAVFAQLVTTCYVQATWIDLSRTFYFERMLGVVFWALL
                     LGLFSYALLRGIADSLTGRMADPSLYGARVREAWHAWRELPRYRVVQRADLMAQLLYL
                     ALTVLCIFYLVVLTIDWYDGVIRLSDTWYRQIAIDGRYRDFPIWSFVIPSLVLMAWKT
                     LTIVRSDPVSRADRWAKALSFGRLLGYDGSRGFVRMDRSFSRVVPVLPEIVLAFLLIF
                     WAAVMLVTEGAIKLYDGGAGGFVAADGGRWVIRTLFWNTQADWFAALAVLMAIPYLAT
                     IYVSIRQPLAEPPPDSYTSKW"
     gene            2349..>2743
                     /locus_tag="VF991_02345"
     CDS             2349..>2743
                     /locus_tag="VF991_02345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007695358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HEX9555304.1"
                     /translation="MEIKGEYKIAAPREKVFAALNDPVVLQACIPGCESLEKVSDTEL
                     KAKVRLRIGPVSASFTGKVTLSDIDPPNGYKISGEGQGGAAGFAKGGAVVTLRDDGGA
                     TILAYNVDAQVGGKIAQVGARLIDGTAKKL"
BASE COUNT          472 a          914 c          896 g          461 t
ORIGIN      
        1 cggcatcgca ggcgcgcgac gggttgggcc actacggcct caatcgcatc cttcgggagc
       61 ccgccacgcg tctcaccatg tgcaccctcg agttcggcac cttcgatcgc gagagcggcc
      121 aaaaggcgtt ccgcgccgac cattggctgc acaaatacgg cgacccgctg ggcaacgagg
      181 cggggcccgt gcggaccgcg atgcgccggc aattctatcc cgagaccgac gactggaagg
      241 aggccgtgct gtttcgtggc catcaggtcg tgcgccaggc gatcgccggc gtccggcgcg
      301 gcgccccgtg aagccctgcc acctctctgg ggacaagcgc ccatgaaaag ccgcacgcaa
      361 cgcaaccgat cctgctaaaa agcctgccta tgctgcgtgc tctggtggcg ctgctcgcgt
      421 tcgcgggcgt ggcggcgctc aatctcttat ggtggtggtg gcccaacagg ccggtggaga
      481 tcgccggctg gacgacggcg ccgttgcaga gcgtgtcgtt cgcgccctac cggccgggcc
      541 aaagcccgct cagccgcacc ttcccgacgc ccgaccagat cgacgacgat ttgcaccgcc
      601 tgcagggcaa ggtgcgcgcc gtgcggacct attcggcggg tgagaacctc gaggccgtgc
      661 cgcagcgcgc cggcaaatat gggctaaagg tctggcacag cgcctggctg aacaacaacg
      721 agaaggagaa cctcgagcag atcaacctcc tgatcgatca cgccaacaag tacaaggaca
      781 ccgtcgagcg ggtgatcgtc ggcaacgagg tgctgctgcg caaggacctc acggcgaacg
      841 agctcaggcg ctacatccgc caggtcaagc agcgcgtgtc gcagccggtg acctatgccg
      901 acgtctggga gttctggctg cgcaacccgt cgctggccga cgaggtcgat ttcatcacca
      961 tccatatcct gccctactgg gaggacgagc cgatcgggct cgatcgccgc gaggccgacg
     1021 gcacgccgag catcgaaaag cacatcgtcg acatctacaa aaaggtgcag gcgcgctttc
     1081 ccggcaagac gatcgtgatc ggcgagaccg gctggccaag cgatggccgc atgcgctccg
     1141 acgcgcggcc ggggcgggtc gagcaggtcc gttacttctc gactttccgc accatcgccg
     1201 agcgcgagaa gttcgactac aacgtcgtcg aggccttcga ccaatactgg aaggcgcgcc
     1261 aggaaggcac ggtcggcgcc gcctggggcc tcctcgacgc gcagcgtcac gacaagttcg
     1321 agctcggcaa gccggtggtg gccgagccga attggcggat gctctacatc ctgtcgacgc
     1381 tggcgagcgg gctgatgctg atgggcttcg tcagcctgcg ccgccagacc aagggcaagg
     1441 ccgtcgcgat ttttgccgtc ttcgcccagc tcgtgacgac ctgctacgtg caggcgacct
     1501 ggatcgacct gtcgcgcacc ttttatttcg agcgcatgct gggcgtcgtg ttctgggcgc
     1561 tgctgctcgg cctgttcagt tatgcgctgc tgcgcggcat cgccgacagc ctgaccggcc
     1621 ggatggccga cccctcgctc tatggcgcac gcgtgcgcga ggcatggcac gcctggcgcg
     1681 agctgccgcg ttatcgcgtc gtgcagcgcg ccgacctgat ggcccagctc ctctatctgg
     1741 cgctgacggt gctctgcatc ttctatctcg tggtcctcac catcgactgg tacgacggcg
     1801 tgatccgcct cagcgacact tggtatcgcc agatcgccat cgacggccgc tatcgcgact
     1861 tcccgatctg gagtttcgtc atcccgagcc tcgtgctgat ggcctggaag acgctgacca
     1921 tcgtgcgctc cgacccggta tcgcgggccg accgctgggc caaggcgctg tcgttcggcc
     1981 gcctgctcgg ctacgacggc agccgcggct tcgtgcgcat ggatcgttcg ttcagccgcg
     2041 tcgtaccggt gctgccggaa atcgtgctgg cgttcctgct gatcttttgg gcggccgtga
     2101 tgctggtgac cgaaggcgcg ataaaactct acgacggcgg cgccggcggg ttcgtcgccg
     2161 ccgacggtgg ccgctgggtc atcaggacac ttttctggaa cacgcaggcc gactggttcg
     2221 cggcactggc cgtgctgatg gccattccct atctggcgac gatctacgta tcgatccgcc
     2281 aacctctggc agaaccgccg ccggactcct ataccagcaa gtggtaggcg tcagccggga
     2341 gttacgacat ggaaatcaag ggcgaataca agatcgccgc accgcgcgaa aaggtctttg
     2401 cggcgctgaa cgaccccgtc gtgctgcagg cctgcattcc gggctgcgaa tcgctcgaaa
     2461 aggtgtcgga caccgagctg aaagccaagg tgcgcctgcg catcgggccg gtcagcgcca
     2521 gcttcaccgg caaggtgacg ctctccgaca tcgacccgcc gaacggctac aagatcagcg
     2581 gcgaagggca gggcggcgcg gccggcttcg ccaagggcgg cgcggtcgtc accttgcgcg
     2641 acgatggcgg tgccaccatc ctggcctaca acgtcgatgc ccaggtcggc ggcaagatcg
     2701 cccaggtggg cgcccgcctg atcgacggca cggccaagaa gct
//
LOCUS       DASWGA010000101         1673 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1911392, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000101 DASWGA010000000
VERSION     DASWGA010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1911392"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..657)
                     /locus_tag="VF991_02350"
     CDS             complement(<1..657)
                     /locus_tag="VF991_02350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX9555305.1"
                     /translation="MKAAVVREHGGPDRLNFESNFPDPKAGEGDVIVAVKASSLNYHD
                     VFTRRGMPGIKVPMPAIMGLDVAGEIAEVGPGVSGWRKGDRVLVDPINRVEGGLMGET
                     VHGGLAELCKARAHQLIKIPDGVSFSDAAALPVAYGTALRMMTTNGHVTKGEKVLILG
                     ASGGVGVCCLQLAKLAGAEVIACAGTDAKAKRLAELGADKTINYVTHDFQDEAYKLYG
                     K"
     gene            complement(660..>1673)
                     /locus_tag="VF991_02355"
     CDS             complement(660..>1673)
                     /locus_tag="VF991_02355"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEX9555306.1"
                     /translation="GRPKGVVLSHYSHLWAISQRVRRPVPPGQRSLVAAPLYHMNGLA
                     MCQTTLSQGDTIVLLPQFTTTGYIEAAAKHRVAFLTSVPTMIAMMLRERELLANSDLS
                     AVEAVRMGSAPVSQSLIDQVRTVFPKAQISNGYGTTEAGPVVFGPHPKGIPQPELSTG
                     YPHPEVELRLVRDGKVVEDEGELEMKCGALMTHYHKLPDVTAKVMTPDGFYRTGDVFR
                     RDDNGFFFFVGRADDMFVCGGENIYPGEVEKMLERHPGIHQAAVLPVPDELKGHKPIA
                     FVVKAPGAELDEQAVKTYALANAPAYQHPRRVLFVEEMPLAGTNKIDKRLLAKQIPTG
                     GEP"
BASE COUNT          254 a          550 c          569 g          300 t
ORIGIN      
        1 cttgccgtag agcttgtagg cctcgtcctg gaagtcgtgc gtgacgtagt tgatggtctt
       61 gtcggcgccg agctcggcca gacgcttggc cttggcatcg gtgccggcgc aggcgatcac
      121 ttcggcgccg gccagcttgg cgagctgcag gcagcatacg ccgacgccgc ccgaggcgcc
      181 caggatcagc accttctcgc ccttcgtgac atggccgttg gtggtcatca tgcgcagcgc
      241 tgtgccgtag gcgaccggca gggcagcggc gtcggagaac gacacgccat cggggatctt
      301 gatgagctgg tgggcgcgcg ccttgcagag ctcggccagg ccgccatgca cggtctcgcc
      361 catcagcccg ccttcgacgc ggttgatcgg atcgaccagc acgcggtcgc ccttcctcca
      421 gccgctcacg ccgggcccca cctcggcgat ctcgccggcg acgtcgaggc ccatgatcgc
      481 cggcatcggc accttgatgc cgggcatgcc gcgacgggtg aagacgtcgt ggtagttcaa
      541 ggaggaggcc ttcaccgcca cgatcacatc gccctcgccg gccttgggat cggggaagtt
      601 cgactcgaag ttcaggcggt cgggcccgcc atgctcgcgg acgacggcgg ctttcatttt
      661 taaggctctc ctccggttgg gatctgcttg gcgagcaggc gcttgtcgat cttgttggtg
      721 ccggcgagcg gcatctcctc gacgaacagc acgcggcgcg gatgctggta ggccggcgcg
      781 ttggccagcg cataggtctt caccgcctgc tcgtcgagct ccgcacccgg cgccttgacg
      841 acgaaggcga tcggcttgtg gcctttcagc tcgtcgggca cgggcaggac cgccgcctgg
      901 tggatgccgg gatggcgctc cagcatcttc tcgacctcgc cgggatagat gttctcgccg
      961 ccgcacacga acatgtcgtc ggcacggccg acaaagaaga agaaaccgtt gtcgtcgcgg
     1021 cggaacacgt cgccggtgcg gtaaaagccg tccggtgtca tcaccttggc cgtgacgtcc
     1081 ggcagcttgt gatagtgcgt catcaacgcg ccgcacttca tttcgagctc gccttcgtct
     1141 tcgaccacct tgccgtcgcg caccaggcgc agctcgacct cgggatgcgg atagccggtc
     1201 gacagctcgg gttgcgggat gcccttggga tgggggccga ataccaccgg accggcttcg
     1261 gtcgtgccat agccgttgct gatctgcgcc ttggggaaca ccgtgcgcac ctggtcgatc
     1321 agcgactggc tgaccggcgc ggagcccatg cgcaccgcct cgacggcgga gaggtcgctg
     1381 ttggccaaaa gctcgcgctc gcgcagcatc atggcgatca tggtcggcac cgaggtcagg
     1441 aaggccacgc gatgcttggc cgcggcctcg atgtatcccg tggtggtgaa ttgcggcaac
     1501 aggacgatgg tgtcgccttg gctcaaggtg gtctggcaca tggccagccc gttcatgtga
     1561 tagagcggtg ctgccaccag cgagcgctgg cccggcggca ccggccggcg cacccgctgg
     1621 ctgatcgccc agagatgcga atagtgcgac agcaccacgc ccttgggccg gcc
//
LOCUS       DASWGA010000102         5343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1020602, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000102 DASWGA010000000
VERSION     DASWGA010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1020602"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2250
                     /locus_tag="VF991_02360"
     CDS             <1..2250
                     /locus_tag="VF991_02360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9555307.1"
                     /translation="AIQRVPGANVIDTVDRIKALLPQLEASLPPAIKVTIAADRTTTI
                     RAAVSDVQFTLLLTVALVVMVIFLFLRNLWATVIPAVTVPLSLVGTFAVLYVLGYSLD
                     NLSLMALSIAVGFVVDDAVVVIENIVRHLEQGLSPMEAALKGSREIGFTIVSITLSLI
                     AVFIPLFLMGGYVGKLFQEFAVTISVSLLISLIVSLTLTPMMCARLLKDQAHRQHGRL
                     YRLFERGFDHLLALYEHGLKIVLRHRFITLMVMLSTIALTGYLYVVIPKGFFPQQDTG
                     QIVGITEASQDISFPAMAQRQQALVDILLKDPAIGSVSNYIGPGGPTATLNQGRVFIA
                     LKPGNQRDVSADQVINRLRPQLAKVQGIALYMQAAQDITIGARLAKTQYQYTLTDADS
                     TELAHWSAIFVEKMKSIPGITDVASDQANGGPMLNVAVNREVASTFGILPSTIDNVLD
                     DAFGQRIVSTIFTQLNQYHVVLEVDPRFQYSPQALRDIYLNSSGGQQVPLSTLVNSNI
                     QPAPIVVNHQGMFPSVTISFNLNPGVALGDAVAAIQQIEKQTGKPLSLATSFQGNAQA
                     FQASLSGTPLLIGAALIVIYIILGVLYESAIHPITILSTLPSAGIGALLLLMAVHMDL
                     SVIAMIGIILLIGIVKKNGIMLVDFALEVERSEGLGPEDSIYRACIMRFRPILMTTMA
                     ALLGGVPLMLGTGTGSEIRQPLGYAIVGGLALSQVLTLYTTPVVFLYLDRLIRRSRPA
                     AAATAAGAE"
     gene            complement(2228..3175)
                     /locus_tag="VF991_02365"
     CDS             complement(2228..3175)
                     /locus_tag="VF991_02365"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX9555308.1"
                     /translation="MLHSSSDASPADRQRWAERRRSLETGRYRVSPDGRRGWRRKRAF
                     DLLVNLFGKLLQPTPFHALGRRNALDLRLVELELAFPHLPAAFDGYRILHLSDTHLDH
                     FPELASVARGLLAGVEVDMLALTGDVHGNHRAPIARSIGLLAEALDGVRVRGPRLAVL
                     GNHDPAAMAEALEGLGFEVLLNRSLVLEHAGQRLHLTGLDDVNCFYTEAALAALAVQP
                     DHDAFRIALVHSAEMADHADAAGCALYLCGHTHGGQICLPGGRPLVTQLTRCRLAGRG
                     LWRWGSMTGYTSCGLGVSGPPLRFNCRGEAAVITLRRRP"
     gene            3303..3689
                     /locus_tag="VF991_02370"
     CDS             3303..3689
                     /locus_tag="VF991_02370"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopC"
                     /protein_id="HEX9555309.1"
                     /translation="MSRRLAVVGLSSAFSSFGMLGAAAPAWAEDLRVMESAPAASAVI
                     ARRSSEFFVRFDRPVDHVRSTLDIMSDGKLVERLKPRLQSAPAVLFARAPTLPSGNYK
                     LHWSVRTMSGVEAIEGDIPFTVKDQP"
     gene            3728..4270
                     /locus_tag="VF991_02375"
     CDS             3728..4270
                     /locus_tag="VF991_02375"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HEX9555310.1"
                     /translation="MPLFLLDRDGVVVVNRSTNIKTPDDLQLIAGAAGAIARLNQAGY
                     DVAICTNQPEVARGAMTQRQLDVVHDALKAMLAAEGAKIGLILCCNSDRRCPRRKPWA
                     GMLTEALVRYGAEAAATPFVGDQADDLKAAFHAGCKRVLVRTGLGRKTLEDGPPSYVQ
                     PVSVHDDLAAAVDAGLAGKL"
     gene            4396..4629
                     /locus_tag="VF991_02380"
     CDS             4396..4629
                     /locus_tag="VF991_02380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555311.1"
                     /translation="MASRSKPPIGPLVAVGILTLVLCLGVIYIYVGWEPFTGKPGFTM
                     TRAGVVGMALGLIAAVLLGIGLTMLIIHGRHKR"
     gene            4646..>5343
                     /gene="xth"
                     /locus_tag="VF991_02385"
     CDS             4646..>5343
                     /gene="xth"
                     /locus_tag="VF991_02385"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX9555312.1"
                     /translation="MKIATFNINNVNRRLPNLLAWLNSARPDIVCLQELKAADEAFPE
                     TDLRRAGYRAVWRGQKTWNGVAILTRRMTPVVTRTALPGDRSDSQSRYIEAAIDGLLV
                     GCLYLPNGNPQPGPKFAYKLAWFRRLQDHAKTLLKSGAPVVLAGDYNAVPTDFDIYSM
                     RSWQDDALVQPETRAAYKKLVDQGWTDALRTLFPDKPMYTFWDYKRQRWQRDAGLRID
                     HLLLSPALKGRLKRG"
BASE COUNT          911 a         1778 c         1706 g          948 t
ORIGIN      
        1 gccatccagc gggttcctgg cgccaatgtg atcgacacgg tcgatcgcat caaggcgttg
       61 ctgccccagc tcgaagcctc actgcctccg gcgatcaagg tcacgatcgc ggctgaccgc
      121 acgaccacca tccgcgccgc cgtatccgac gtgcagttca cccttctgct gaccgtcgcc
      181 ctggtcgtga tggtcatctt cctgttcctg cgcaatctct gggcgaccgt cattccggcg
      241 gtgacggtgc cgctgtcgct ggtgggcacg ttcgcggtgc tctatgtgct gggctacagc
      301 ctggacaatc tgtcgctcat ggccttgtcg atcgccgttg gcttcgtggt cgacgacgcg
      361 gtcgtcgtga tcgaaaacat cgtgcgccat ctcgaacagg gcctcagccc gatggaggcg
      421 gccctcaagg gttcacggga aatcggcttc accatcgttt ccatcacctt gtcgctgatc
      481 gccgtcttca tcccgctgtt cctgatgggc ggttatgtcg gcaagttgtt ccaggagttc
      541 gccgtaacga tctccgtctc gttgctgata tccctcatcg tctcgctgac cctgacgccg
      601 atgatgtgcg cgcgtctgct gaaggaccag gcgcaccgcc agcacggacg gctctatcgc
      661 ctgttcgaac gcggcttcga ccatcttctg gcgctctatg agcatggcct gaagatcgtt
      721 ttgcgccacc gcttcatcac cctgatggtg atgctcagca ccatcgccct gaccggctat
      781 ctctacgtcg tcattccaaa gggcttcttc ccgcagcagg ataccggcca gatcgtcggt
      841 atcaccgagg cgtcgcagga catctcgttt cccgcgatgg cccagcgcca gcaggcgctg
      901 gtggatatcc tgttgaagga tccggcgatc ggctcggtca gcaactacat cggccccggc
      961 ggcccgaccg cgacccttaa ccaggggcgc gtcttcatcg ccctgaagcc cggcaatcag
     1021 cgcgacgtca gcgccgacca ggtcatcaac cggttgaggc cgcaactggc caaggtccag
     1081 ggcatcgccc tttatatgca ggccgcgcag gacatcacca tcggcgcgcg tctggcaaag
     1141 acccagtatc aatataccct gaccgacgcc gattcgaccg agcttgccca ctggtcggcg
     1201 atcttcgtcg aaaagatgaa aagcatcccc ggcatcacgg atgtggccag cgaccaggcc
     1261 aatggcggac ccatgctcaa cgtggccgtc aaccgcgagg tcgcatcgac tttcggaatt
     1321 cttccgtcaa cgatcgacaa tgtgctcgac gatgccttcg gtcagcgcat cgtctcgacc
     1381 atctttaccc aactcaatca gtatcacgtc gtgctcgagg tagatccgcg ctttcagtac
     1441 agcccgcagg cactgcgcga catctatctg aactcgtcgg gcggccagca ggtgccgctg
     1501 agcacactgg tgaacagcaa catccagccg gcgccgattg tcgtcaacca tcaggggatg
     1561 ttcccgtcgg tcacgatctc gttcaacctg aatccgggcg tagcgcttgg cgatgcggtc
     1621 gccgccatcc aacagatcga gaagcagacc ggcaaacccc tctcgctcgc cacctccttt
     1681 caaggaaacg cacaggcttt tcaggcatcg ctctcgggaa cgccgctgct gatcggcgcg
     1741 gcgctgatcg tgatctacat cattctgggc gtcctctatg agagcgcgat ccatccgatc
     1801 accatcctgt ccaccctgcc ttcggccggc atcggcgcct tgctgctgct gatggcggtg
     1861 catatggatc tcagcgtgat cgccatgatc ggcatcatcc tgctgatcgg catcgtcaag
     1921 aagaacggca tcatgctggt cgacttcgcc ctcgaggtcg aacggagcga aggcttgggc
     1981 ccggaagact cgatctaccg cgcctgcatc atgcggttcc ggccgatcct gatgaccacc
     2041 atggcggcac tgctgggtgg cgtgccgctg atgctcggca ccggaacggg gtcggagatt
     2101 cgccaaccgc tcggctatgc cattgtcggc ggcctggcgt tgtcccaggt tctgacgctt
     2161 tacacgacac cggtcgtctt cctgtatctc gaccggctca tcaggcggtc gcgtccggca
     2221 gcagcggcta cggccgccgg cgcagagtga tgacggccgc ctcgccgcgg cagttgaagc
     2281 gcagcggcgg acccgagacg ccgagcccgc aactggtgta gcccgtcatg cttccccatc
     2341 gccacaggcc gcgccccgcc agccggcagc gcgtgagctg ggtgacgagc ggccggccgc
     2401 cgggcaggca gatctggccg ccatgggtgt ggccgcaaag atagagcgcg cagccggcgg
     2461 catcggcgtg gtcggccatc tccgccgagt gcacgagagc gatgcggaag gcgtcgtggt
     2521 ccggttgcac cgcgagcgcc gccagcgccg cctcggtgta gaagcaattg acgtcgtcga
     2581 gtccggtgag atgaaggcgc tggccggcgt gctccagcac cagcgagcga ttgagcagga
     2641 cctcgaagcc caggccttcc agcgcctcgg ccatggcggc tgggtcgtga ttgccgagca
     2701 cggcgagccg cgggccacgc acccgcacgc cgtccagcgc ctcggccagc agcccgatcg
     2761 agcgggcgat cggcgcacgg tgattgccgt gcacgtcgcc ggtcagcgcc agcatgtcga
     2821 cctcgacacc ggccaatagg ccgcgcgcaa cggacgccag ctcagggaag tggtcgagat
     2881 gggtgtcgct gaggtgaagg atgcggtagc cgtcgaaggc cgccggcaga tgcgggaagg
     2941 caagctcgag ctcgaccagc ctgagatcga gcgcattgcg ccggccaagt gcatggaatg
     3001 gcgtcggctg cagcagcttg ccgaacaggt tcaccaggag gtcgaatgcg cgcttgcgcc
     3061 gccagccgcg gcggccatca gggctgacgc ggtagcggcc ggtctccaga ctgcgacggc
     3121 gttcagccca tctctgccgg tcggcgggcg atgcgtcgga cgaagaatgc agcatcatgc
     3181 tccgtgaaaa tcgggcgcgc cggccggcgg ccgtgggatt tgtagcatcc ctttggcctg
     3241 gatggctgtg gccttcgtgc ggatggacaa ggcgccaggg ctgatgttga gtggcgatca
     3301 tgatgtcgcg gcgcttggcc gttgtcggcc tgtcatccgc cttttcgtcc ttcggcatgc
     3361 tgggcgcggc ggcgccggct tgggccgaag acctccgagt catggaatcg gcaccggcgg
     3421 cgagcgcggt gatcgcccgg cgcagcagcg agttcttcgt gcgattcgat cggccggtcg
     3481 atcatgtccg ttcgacgctc gatatcatga gtgacggcaa gctggtcgaa cggctcaaac
     3541 ctcgactgca atcggcgccc gcggtcctgt tcgcgcgggc gcccaccctt ccttccggaa
     3601 actacaagct gcactggtcg gtgcgcacca tgtcgggcgt cgaggccatc gaaggcgaca
     3661 ttcccttcac ggtgaaggac cagccgtagc gccgcagcct ggcgcggccc ggcgcgttga
     3721 acgccgtatg ccgctcttcc ttctcgaccg tgacggcgtc gtggtcgtca accgcagcac
     3781 caacatcaag acgccagacg atttgcagct gattgccggg gcggctggag cgatcgcacg
     3841 gttgaaccag gcgggctacg acgtggcgat ctgcaccaac cagcccgaag tcgcacgcgg
     3901 cgccatgacc cagcgccagc tcgacgtggt gcacgacgcg ctgaaggcaa tgctggcggc
     3961 cgagggcgcc aagatcggcc tgatcctgtg ctgcaacagc gaccggcgat gtccgcgacg
     4021 caagccgtgg gcggggatgc tgacggaagc actggtgcgc tacggcgcgg aggccgcggc
     4081 cacgccgttc gtcggcgacc aggcggacga cctcaaggcc gccttccatg ccggctgcaa
     4141 gcgcgtgctg gtgcggacgg ggctcggccg caagacactg gaggacggcc cgccctccta
     4201 tgtgcagccg gtttcggtgc acgacgactt ggccgccgcc gtcgatgcag gccttgcggg
     4261 caaactgtaa gggcagctcg cggattttcc gcagatcgat ggcgcgatcg cgggcttgag
     4321 ggaaaatcgt gaccttcgcc ggggaacgtc caccgccatt ccttccgcgg cggacgtgtc
     4381 gtatcgggct cggcaatggc aagccgatcc aagcccccta tcggaccgct ggtcgccgtc
     4441 ggcatcctga cgctcgtgct ctgcctgggc gtgatctata tctatgtcgg atgggaaccg
     4501 ttcacgggca agcccggctt cacgatgacc cgggcgggtg tcgtcggtat ggcgcttggc
     4561 ctgatcgccg ccgtccttct cggaatcgga ctgacgatgt tgatcatcca cggccggcac
     4621 aagcgttagc gcgtgcgacc gaggcatgaa aatcgcgacc ttcaacatca acaacgtcaa
     4681 tcgccgtctg cccaacctgc tcgcctggct gaacagcgca cggcccgaca tcgtctgcct
     4741 gcaggagctg aaggcggccg acgaggcctt tcccgaaacc gacttgcgcc gggccggcta
     4801 ccgcgcggtg tggcgcggcc agaagacctg gaacggcgtc gccatcctga cccggcggat
     4861 gacgcctgtg gtcacgcgca cggcgctgcc cggcgaccgc agcgacagcc agagccgata
     4921 tatcgaggcg gcaatcgacg gcctgctcgt cggctgcctc tatctgccca acggcaatcc
     4981 gcagcccggg ccgaaattcg cctacaagct cgcctggttc cgccgcctgc aggaccatgc
     5041 caagacgctg ctgaaaagcg gcgcgccggt cgtgctggcc ggcgactaca atgccgtgcc
     5101 gaccgacttc gacatctatt cgatgcgctc gtggcaggac gatgccctgg tccagcccga
     5161 gacacgtgcg gcctacaaga agctcgtcga ccagggctgg acggatgcgc tgcgcacgct
     5221 cttccccgac aagccgatgt acaccttctg ggattacaag cggcagcgct ggcagcgcga
     5281 cgcgggcttg cgcatcgatc acctgctgct gtcgccagcg ctcaagggcc gcctgaagag
     5341 ggg
//
LOCUS       DASWGA010000103         3142 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1533281, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000103 DASWGA010000000
VERSION     DASWGA010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1533281"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VF991_02390"
     CDS             <1..528
                     /locus_tag="VF991_02390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9555313.1"
                     /translation="FALAILLVYLCLAGQYESWIAPLAVILAVPLALIGPAIALGSIG
                     LANNLYTQIGLMLLIALGAKNAILIVEVAREARKIDGKPIVEAAVEAARTRFRPILMT
                     SFAFILGVVPLVTATGAGANSRISLGLAVFSGMIASTCLAVLFVPSFFTVLQRLEERR
                     KKGKATKPAASAASS"
     gene            535..984
                     /locus_tag="VF991_02395"
     CDS             535..984
                     /locus_tag="VF991_02395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555314.1"
                     /translation="MHTFVAAGAAFLLAVLWFDLMFDVQTRKHGDNPLPAEVLASISA
                     YYRRVTTEAYPMNRLVALVMVLTLLAICAQIIEAASPWWVGWGSLALAGGGFPFTIAR
                     TVPNARRLGSANDPPDVQSTLARAIWRDHVLSFVRMSLVLGLQLIAG"
     gene            1166..2752
                     /locus_tag="VF991_02400"
     CDS             1166..2752
                     /locus_tag="VF991_02400"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555315.1"
                     /translation="MDRRDIFGLFVRWLAALAMLVGCPIAAHAETVLRIVMNSDLKIL
                     DPIWNTAFVIRDHGYMIYDTLFATDAQGEIKPQMVDRTEVSADGLVYTFTLRDGLLWH
                     DGQPVTAEDCVASIKRWAARDTVGQKLMTFIQTVVARDARTIELRLKEPTGLVLPALG
                     KANSNVPFMMPKRVAETDPFTQITDSTGSGPFIFKRDEWRPGHLAVYVRNPNYKPRAE
                     PVSRLAGGKLAKVDRIEWLAMPDHQQAINALQSGEIDFIEAPPFDLHPLLKADRNIQL
                     LTLSPVGSQNVFRLNHLHKPFDNPAVRRALWYAFNQEDFLKAVIGDPAKYKVCKALFI
                     CGTAYASDRGMEGLLESNFDKAQALLKQAGYDGTPIVLLQSSDLFWQTNLAPVAKRLM
                     EKSGFKVDMQPMDWQSIVIRTSRKNPPEQGGWHAYLISPSAMDLMDPLSNRYLNSSCD
                     KAFNGWPCDPEMEKLRDRFARETDPAKLKEIAEAAQVRATEWTPYVHLGEWRLVSAAR
                     KTVSGFISAGPTVFWNVEKK"
     gene            complement(2890..>3142)
                     /locus_tag="VF991_02405"
     CDS             complement(2890..>3142)
                     /locus_tag="VF991_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HEX9555316.1"
                     /translation="QQPSDEIFRRGRDQFDRLHADGEKAPRVMAISIHPYLTGVPHRI
                     KYLEMLYDHILGHDGVVMWTGAEILDWYRAQVALASGTR"
BASE COUNT          534 a         1044 c          998 g          566 t
ORIGIN      
        1 ttcgcgctgg ccatcctgct ggtctatctc tgccttgccg gccagtacga aagctggatc
       61 gcgccgctcg ccgtgatcct cgcggtgccg ctggcgctga tcggcccggc gatcgcgctg
      121 ggcagcatcg gcctcgccaa caacctctat acccagatcg gcctgatgct gctgatcgca
      181 ctcggcgcca agaacgccat cctgatcgtc gaggtcgcgc gcgaagcccg caagatcgac
      241 ggcaagccga tcgtcgaggc cgccgtcgaa gccgcccgca cgcgctttcg gccgatcctg
      301 atgacgtcgt tcgccttcat cctgggcgtg gtgccgctgg tgaccgcgac gggcgccggc
      361 gcgaactccc gcatctcgct gggcctcgcc gtgttcagcg gcatgatcgc ctcgacctgc
      421 ctcgccgtgc tgttcgtgcc gtcgttcttc acggtgctgc agcgcctcga ggagcggcgc
      481 aagaagggca aggcgaccaa gccagcggcg agcgccgcgt cctcctgaga tcccatgcac
      541 acgttcgtcg ccgccggcgc cgctttcctg ctcgccgtcc tgtggttcga cctgatgttc
      601 gacgtgcaga cccgcaagca tggcgacaat ccgctgccgg ccgaggtgct ggcgtcgatc
      661 tcggcctact accggcgcgt cacgaccgag gcctatccga tgaatcggct ggtggcattg
      721 gtcatggtcc tgaccctgct ggcgatctgc gcccagatca tcgaagcggc gagtccatgg
      781 tgggtcggct ggggctcgct ggcgctggcc ggcggcggct tccctttcac catcgcccgc
      841 accgtcccca acgcacgacg gctcggcagc gcaaacgacc cgcctgatgt gcagtcgacg
      901 ctcgcgcgcg cgatctggcg ggaccatgtg ctgagcttcg tgcgcatgtc cctcgtgctg
      961 ggcctacaac tgatcgccgg ataggggcgg ctgttccctt gaagggcctg cgggccagac
     1021 tggcgctgca cccggcagga aggcggccaa catcaggtcg gcgtaacgct ccaccgggtc
     1081 cggctgttgt cctcgaccgg cccgcctgcc acattccctg cgctggagtt gcgtcgcgtt
     1141 gtcacggagt gatgggagaa acgccatgga ccggcgcgac atttttgggc ttttcgtgcg
     1201 atggctggct gccctcgcga tgctcgtcgg gtgtcccatc gcggcccatg cggagacggt
     1261 gctgcgcatc gtcatgaact ccgatctgaa gattctcgat ccgatctgga acacggcctt
     1321 cgtcatccgc gaccacggct acatgatcta cgacaccctg ttcgcgaccg acgcccaggg
     1381 cgagatcaag ccgcagatgg tcgacaggac cgaggtgtcg gccgacgggc tggtctacac
     1441 gttcacgctg cgcgatggcc tactgtggca cgacggccag ccggtgacgg ccgaggactg
     1501 cgtcgcctcg atcaagcgct gggccgcgcg ggataccgtg ggtcaaaagc tcatgacctt
     1561 catccagacc gtcgtggcca gggatgcccg cacgatcgag ctcaggctga aggagccgac
     1621 cgggctggtg ctgccggcgc tgggcaaggc aaattccaac gtgccgttca tgatgcccaa
     1681 gcgcgtcgcc gaaaccgatc ccttcaccca gatcaccgac tccaccggct cggggccgtt
     1741 catcttcaag cgcgacgaat ggcggccggg tcatctggcg gtctatgtca ggaatcccaa
     1801 ctacaagccg cgggcggagc cggtctcgcg actggccggc ggcaagctgg ccaaggtcga
     1861 tcgcatcgaa tggctggcca tgcccgacca ccagcaggcc atcaatgcgc tgcagtccgg
     1921 cgagatcgac ttcatcgaag cgccgccgtt cgacctgcat ccccttctca aggccgaccg
     1981 caacatccag ctcctgacgc tgagcccggt gggcagccag aacgtctttc gcctgaacca
     2041 cctgcacaag ccgttcgaca atcccgcagt gcggcgcgcg ctttggtacg ccttcaacca
     2101 ggaggatttc ctgaaggcgg tgatcggcga tccggccaag tacaaggtct gcaaggcgct
     2161 gttcatctgc ggcaccgcct atgcgtccga caggggcatg gagggcctgc tggagtcgaa
     2221 tttcgacaag gcgcaggcgc tgctgaaaca ggcgggctat gacggaacgc ccatcgtgct
     2281 gctgcagtcg agcgatctct tttggcagac caatctcgcg ccggtggcga aacggctgat
     2341 ggagaaatcc ggcttcaagg tcgacatgca gccgatggac tggcaaagca tcgtcatccg
     2401 cacgtcgcgc aagaacccgc ccgagcaagg cggctggcat gcctatctga tctcgccctc
     2461 ggcgatggat ctcatggacc ccctgtccaa ccgatacctc aattcctcct gcgacaaggc
     2521 cttcaacggc tggccgtgcg atccggagat ggaaaagctg cgcgatcgct tcgcccgcga
     2581 gaccgacccg gccaagctga aggagatcgc cgaggcggcg caggtccggg cgacggagtg
     2641 gacgccctat gtccatctcg gcgaatggcg tctcgtttcg gcggcgcgca agaccgtctc
     2701 gggcttcatc tcggccggtc cgacggtgtt ctggaacgtc gagaagaaat aagtccgggc
     2761 ggcaaatcgt tcgttgttta cgttcgctgt catcccgagc gtagcgaggg acctttaaag
     2821 ccacaggaaa ggtccctcgc tacgctcggg atgacagcgt tttcttaact ccagctcgtg
     2881 cgacgaccgc tagcgggtac cgctcgccag cgcgacctgc gcgcgatacc agtcgaggat
     2941 ctcggcgccg gtccacatca ccacgccgtc gtggccgagg atgtggtcat agagcatttc
     3001 cagatatttt atgcggtgcg gcacgcccgt gagataagga tggatcgaaa tcgccatcac
     3061 gcgcggcgct ttttcgccgt cggcatggag ccggtcgaac tggtcgcggc cgcggcggaa
     3121 gatttcgtcc gaaggctgct gc
//
LOCUS       DASWGA010000104         2440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2039461, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000104 DASWGA010000000
VERSION     DASWGA010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2039461"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1282)
                     /locus_tag="VF991_02410"
     CDS             complement(<1..1282)
                     /locus_tag="VF991_02410"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9555317.1"
                     /translation="MDEEPKPCDLLVTGDLILTLDAADRVLHGGAIAIADRAIVDIGP
                     ADELGRRWGAAATVDGKGRIVMPGLVNVHNHTPLMITRGMIEDIGFAPMYTPGIPQGH
                     WLREEDAYALSSLGMYELLRAGCTTVVDFYRYPGACARAAAELGVRAVIAGRVHDAEP
                     AALATGRYDHSRAIGEASLKENAELIARWNGHDGGRIRCDWAPHAPDTCSDDLLREVK
                     KLADAHGGNVHTHLSQLPLEVEAVRARTGLTPPQLMDKLGLLDDRLIAAHCIHLERSD
                     IELCGKSRMTVAHAPIGNAKGGRIAPIMELREAGARIALCTDTFSGDLIEAMRWAIAM
                     QRIDRQGNVLDARTVLDWGTREGAEAIGMGDRIGSLEVGKRADIVLLDNRSPSLAPLV
                     DGYGVLVHSASGHDVDTVIVDGRVVLSDGRLTMAD"
     gene            complement(1286..2086)
                     /locus_tag="VF991_02415"
     CDS             complement(1286..2086)
                     /locus_tag="VF991_02415"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9555318.1"
                     /translation="MTAAERLARAGMWMAALFTVVFLMTPLVVTVAVSLGSSSVFTLP
                     PPGWSLRWYERLADTRGLVPSLVTSLQVAAFSTAVALALGTLCAIALVRGRFPGRDGI
                     ATFLVSPLMLPGLVVGIAMLQGFKAIGLREAYLSLLVAHVVITLPYVVRTVLGALSLF
                     DFSLIDAARTLGCSYPAALVRVLVPALGPAFLTSGMFAFLASMDNYPISIFFTDAWTK
                     TLPIQMLQYVEENPDPTIAAISAGLVLLAILALIVGDRLVGLRKLADF"
     gene            complement(2083..>2440)
                     /locus_tag="VF991_02420"
     CDS             complement(2083..>2440)
                     /locus_tag="VF991_02420"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9555319.1"
                     /translation="MILPIYSVVKLIDPRLDEAGATLGATPVYRFLRVTLPLTLPGIV
                     SGVAFVFSMSVSMYVIPSLLIGDRFQTLSTLTGRSFLFMRNEQLGSTTAVVLLALAVS
                     VVVGSGWLARRLGSST"
BASE COUNT          451 a          795 c          853 g          341 t
ORIGIN      
        1 catcggccat cgtgagccgg ccatccgaca gcaccacgcg gccatcgacg atcacggtgt
       61 cgacgtcgtg ccccgaagcg ctgtgcacca gcacgccgta gccgtcgacc agcggcgcca
      121 gcgacggcga gcgattgtct aaaagtacga tgtcggcccg cttgccgact tccagcgagc
      181 cgatcctgtc gcccatgccg atcgcttcgg cgccttcgcg cgtgccccaa tcgagcacgg
      241 tgcgggcgtc caggacattg ccctggcggt cgatgcgctg catggcgatc gcccagcgca
      301 tggcctctat aaggtcgccg gagaaggtgt cggtgcaaag cgcgatgcgc gcgccagcct
      361 cgcgcagttc catgatgggg gcgatgcggc cgcccttggc gttgccgatc ggcgcatgcg
      421 ccaccgtcat cctcgatttg ccgcagagct cgatgtcgga gcgctccagg tggatgcagt
      481 gtgccgcgat cagccgatca tccagcaggc cgagcttgtc catgagctgt ggcggcgtga
      541 ggccggtgcg cgcccgaacc gcctcgactt cgaggggaag ttgcgagaga tgcgtatgga
      601 cgttgccgcc atgggcatcg gccagcttct tgacctcgcg cagcagatcg tccgaacaag
      661 tgtcaggcgc atgcggcgcc caatcgcagc ggatccgccc gccgtcatgg ccgttccagc
      721 gcgcgatcag ctcggcattt tccttcagac tcgcctcgcc gatggcgcgg ctgtggtcgt
      781 agcggccggt ggcgagcgct gcgggctcgg cgtcgtgcac gcggccggcg atgacggccc
      841 tcacgccgag ctcggccgcg gcgcgagcgc aggcgccggg atagcgatag aaatcgacca
      901 ccgtggtgca gccggcgcgc agcagttcgt acatgccgag actcgacagc gcgtaggcat
      961 cctcctcgcg gagccaatgg ccctgcggaa tgcccggcgt gtacatcggc gcaaaaccga
     1021 tatcctcgat catgccgcgg gtgatcatga gcggcgtatg gttgtgcacg ttgaccaggc
     1081 cgggcatgac gatgcggcct ttgccgtcga ccgtagcggc ggcaccccag cgccggccga
     1141 gttcatcggc cgggccgatg tcgacgatgg cgcggtcggc aatcgcgatt gcgccgccgt
     1201 gcaggacacg gtcggcggcg tcgagcgtca ggatcagatc gccggtgacc agcagatcgc
     1261 aaggtttggg ttcttcgtcc atggtctaaa agtccgccag tttgcgcagg ccgaccagcc
     1321 ggtcgccgac gatgagcgcc aggatcgcca gcaggaccag tccggcggag atggcggcga
     1381 tcgtcgggtc ggggttctcc tcgacatact gcagcatctg gatcggcagc gtcttggtcc
     1441 aggcgtcggt gaagaagatc gagatcggat agttatccat cgaggcgaga aaggcgaaca
     1501 tgcccgaggt caggaacgcc ggtcccaagg ccggcaccag cacgcgcacc agcgccgccg
     1561 gataggagca gccgagcgtg cgcgccgcgt cgatcagcga gaagtcgaac aggctgagcg
     1621 cgccgagtac ggtgcgcacc acgtagggca gcgtaatcac cacatgcgcc acgagcaggc
     1681 tgaggtaagc ctcgcgcagc ccgatcgcct tgaaaccttg cagcatggcg atgccgacca
     1741 ccaggcccgg cagcatcagc ggcgagacca ggaatgtcgc gatgccgtca cgaccgggaa
     1801 agcggccgcg cacgagagcg atggcgcaaa gcgtgccgag cgccaaggcg accgcggtcg
     1861 agaaggcggc gacctgcagc gacgtcacca gcgacggcac caggccgcgc gtgtcggcga
     1921 gcctctcgta ccagcgcaac gaccagcccg gcggcggcag ggtgaagacg ctcgaggagc
     1981 ccagcgacac cgcgacggtc accaccagcg gagtcatcag gaagaccact gtgaacagcg
     2041 cggccatcca catgccggcg cgggccaggc gctcggctgc ggtcatgtgc tgctgcccaa
     2101 ccggcgggca agccaacccg acccgacgac gacgctgacc gcgagggcga gcaggacgac
     2161 ggccgtggtc gagccgagct gctcgttgcg catgaacagg aacgagcggc cggtaagggt
     2221 cgagagcgtc tggaagcgat cgccgatcag cagcgagggg atcacgtaca tcgacacgct
     2281 catggagaag acgaacgcca cgcccgagac gatgccgggc agggtgagcg gaagcgtgac
     2341 gcgcaggaag cggtagacgg gcgtggcgcc gagcgtcgcg cctgcctcgt cgagcctggg
     2401 atcgatcagc ttcaccaccg aatagatcgg caggatcatg
//
LOCUS       DASWGA010000105         1781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1154166, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000105 DASWGA010000000
VERSION     DASWGA010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1154166"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..1428)
                     /locus_tag="VF991_02425"
     CDS             complement(160..1428)
                     /locus_tag="VF991_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX9555320.1"
                     /translation="MSEVKLTTLGNGLRVAVDEMPEVESASLGIWVACGTRHESAELN
                     GMAHMLEHMAFKGTRTRSARAIAEEIENVGGSLNAYTGREITAYHASVLKEDVGLGVE
                     LISDILRNSVFDPDELQRERGVILQEIGQALDTPDDVIFDQFQETALPGQPLGRPVLG
                     TAQSVETIGRDDLFAYLARHYTGSNMVLAAAGRVDHDHIVDLAEKHFGSVPRTPANAE
                     PPAPLRYVGGDGREARVLEQAHLVLGCEGIGYRDPDYFALAVYSTLFGGGMSSRLFQR
                     IREERGLVYGIHCFNTAYADGGLFGIYAGTGEDDLAELVPAVCEEFSGVAGTLTEAEL
                     VRARNQIKAGTLMALESSGARCEQAARHLIIHGRPIPYAEIVARIEAVDQQAVRRVAR
                     RLLEGKLTLAALGPIDELEPLDNIAARLAA"
     gene            complement(1425..>1781)
                     /locus_tag="VF991_02430"
     CDS             complement(1425..>1781)
                     /locus_tag="VF991_02430"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389784.1"
                     /note="catalyzes the formation of L-threonine from
                     O-phospho-L-homoserine; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX9555321.1"
                     /translation="DAGRLDDEGTLAAIADCRRRFGETIDPHTAVGYAVAQQHRRDLK
                     VPMVVLATAHPAKFPDAVAKATGERPRLPARLGDLMERAERVDGLPNDIVALKALIDE
                     RTALAKPAPLRAKVRT"
BASE COUNT          259 a          604 c          648 g          270 t
ORIGIN      
        1 gaggtcaaag ccgtcgtcga gcgcgccgcc atcggcgtac cgccgcgggc gagcgagacg
       61 gagctggcgc gggcggcgta accccctccg gcccttcggg ccacctgtgc gttttggccc
      121 gaagggccaa aacgcagacc cgtaagacgg gggaggcaat caggccgcga gccgtgcggc
      181 gatattgtcg agaggttcga gttcgtcgat cggccccagc gcggccaggg tgagcttgcc
      241 ttcgagcagg cggcgcgcga cgcggcgcac ggcttgctga tcgaccgctt cgatgcgggc
      301 cacgatctcg gcatagggga tcggccggcc gtggatgatg agatggcgcg ccgcctgctc
      361 gcagcgcgcg ccgctcgatt ccagcgccat cagggtgccg gccttgatct ggttgcgggc
      421 gcgcacgagc tcggcttcgg tgagcgtgcc ggcgacgcct gaaaattcct cgcagaccgc
      481 cggcaccagc tcggcaaggt cgtcctcgcc ggtgccggca tagatgccga acaggccgcc
      541 atcggcatag gcggtgttga agcaatggat gccgtagacc aggccgcgct cctcgcggat
      601 gcgctggaac aggcgcgagg acatgccgcc gccgaacagg gtcgaataga cggcgagcgc
      661 gaaatagtcg ggatcgcgat agccgatgcc ctcgcagccc agcacgaggt gggcctgctc
      721 gagcacccgc gcttcgcggc catcgccgcc gacatagcgc agcggcgccg gcggctcggc
      781 gttggccggc gtgcgcggca ccgagccgaa atgcttttcc gccaggtcga cgatgtggtc
      841 gtggtcgacc cggccggccg ccgccaggac catgttcgag ccggtgtagt ggcgcgcgag
      901 ataggcgaac aggtcgtcgc ggccgatcgt ctcgaccgat tgggcggtgc ccagcaccgg
      961 ccggccgagc ggctggccgg gcagcgcggt ttcctggaac tggtcgaaga tcacgtcgtc
     1021 gggcgtgtcg agcgcctggc cgatctcctg caggatcacg ccgcgctcgc gctgcagctc
     1081 gtcgggatca aacaccgagt tgcgcaggat gtcggagatc agctcgacgc ccaggccgac
     1141 atcctccttc agcaccgagg cgtgataggc ggtgatctcg cggccggtat aggcgttgag
     1201 gctgccgccg acattctcga tctcctcggc gatggcgcgc gccgagcgcg tgcgcgtgcc
     1261 cttgaaggcc atgtgctcga gcatgtgcgc catgccgttc agctcggcgc tctcgtggcg
     1321 cgtgccgcag gccacccaga tgccgagcga cgccgattcg acctcgggca tctcgtcgac
     1381 cgccacgcgc agcccgttgc cgagcgtggt gagcttgacc tcgctcatgt gcgcaccttg
     1441 gcgcgcagcg gcgcgggctt cgccaaggcc gtccgctcgt cgatcagggc cttcagggcc
     1501 acgatatcgt tgggcaggcc gtcgaccctc tccgcccgct ccatcaggtc gcccagccgg
     1561 gccggcaggc gcggccgctc gccggtcgcc ttggccacgg cgtcggggaa cttggcggga
     1621 tgggcggtcg ccagcacgac catgggaact ttcagatcgc ggcgatgctg ctgggccacg
     1681 gcgtagccca cggcggtgtg cggatcgatc gtctcgccga agcggcggcg gcagtccgcg
     1741 atggcggcaa gcgtgccctc gtcgtccagg cggccggcat c
//
LOCUS       DASWGA010000106         3121 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2039655, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000106 DASWGA010000000
VERSION     DASWGA010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2039655"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..723
                     /locus_tag="VF991_02435"
     CDS             <1..723
                     /locus_tag="VF991_02435"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9555322.1"
                     /translation="LQVQWRRGNVDLRMGLVLLLGGMIGSTAGVSLFTYLKKIGQIDF
                     VIAVLYVVMLSTIGVLMLFESLRTYLRRRRNPEAPRGKLHTHYLVHRLPLKLRFYKSK
                     LYISGLLPLGIGFAIGILSAILGVGGGFVLVPAMIYILGMPTAVVIGTSNFQILFVAA
                     NVTFLQAATNGTVDVVLAMLLILGGVVGAPVGSRLAAKLPGVVLRGLMAILILAVASE
                     LLTELLRTPSSFYSLGSREVLP"
     gene            720..1562
                     /locus_tag="VF991_02440"
     CDS             720..1562
                     /locus_tag="VF991_02440"
                     /inference="COORDINATES: protein motif:HMM:NF021148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02186 family protein"
                     /protein_id="HEX9555323.1"
                     /translation="MTRRALAVALACLLASHAAAQGPRIEPPAGGLVGPTLGGPVDSS
                     VPPSVPAQSTTPDLVVDLSRARVSITSAFQGESILLFGMFDPPGEIVVVVAGPPGRET
                     VLRKQRFLGLWLNIGRQAFDDVPAYYAIAASQPLQRLLARSAGGEILSLEDRLASVRS
                     VGEREHQDLTKFRLGLVEVKRQEGLYPPAIGQVTIQAHRLFRVDLPFPSRLPEGVYDV
                     RTYLLRDGKIVAAVSRPLPVGKVGFNAELASWATHDGPLYGLGAIILALMAGWIGGAI
                     MRRL"
     gene            1593..2078
                     /locus_tag="VF991_02445"
     CDS             1593..2078
                     /locus_tag="VF991_02445"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX9555324.1"
                     /translation="MSEQPSRSEERVFLVVVDESPEMRKALRYACRRAKRTGGRVAML
                     YVMEPPEGQQWGAVVDLMRQEARQEAEAIVARHADDAVTLTGQPPAIYIREGKSRDEL
                     IKLLTEDRSISVLVLGGASGSEGPGPLVTAFAGKLGNQLRIPLTIVPGALTEAEIDAI
                     S"
     gene            2371..2919
                     /locus_tag="VF991_02450"
     CDS             2371..2919
                     /locus_tag="VF991_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEX9555325.1"
                     /translation="MFIQTEQTPNPSTLKFLPGRVVMEKGTMDFASADTATPSPLAKR
                     LFAIEGVERVFFGSDFVTVTKAADRDWQVLKPSILGGIMEHYTSGDPVIADAAEATAA
                     SADDDEVVAQIKELLDTRVRPAVAQDGGDIIFQDFRDGVVYLHMQGSCSGCPSSTATL
                     KMGIENLLKHYVPEVLEVQAAQ"
BASE COUNT          499 a          996 c         1051 g          575 t
ORIGIN      
        1 ctgcaggtcc agtggcggcg cggcaacgtc gacctgcgca tggggctggt cctgctgctg
       61 ggcggcatga tcggctcgac ggcaggcgtg tcgctgttca cctacctcaa gaagatcggc
      121 cagatcgact ttgtcatcgc cgtcctctac gtcgtcatgc tgtcgacgat cggcgtcttg
      181 atgctgttcg agagcctcag gacctacctg cggcgccggc gcaaccccga ggcgccgcgc
      241 ggcaagctgc atacccacta cctggtgcat cgcctgccgc tgaaactgcg cttctacaag
      301 tcgaagctct atatcagcgg cctgctgccg ctcggcatcg gcttcgccat cggtatcttg
      361 tcggccatcc tgggcgtcgg cggcggcttc gtcctggtgc cggccatgat ctacatcctc
      421 ggcatgccga cggcggtcgt gatcggcacc tcgaacttcc agatcctgtt cgtggcggcc
      481 aacgtcacct tcctgcaggc cgcgaccaac ggcacggtcg atgtcgtgct ggcgatgctg
      541 ctgatcctgg gcggcgtggt cggcgcgccg gtcggctcgc ggctcgcggc caagctgccg
      601 ggcgtggtgc tgcgcggtct catggcgatc ctgatcctgg ccgtggcgag cgagctgttg
      661 accgagcttt tgcgcacgcc gagctcgttc tactcgctgg gatcgcgcga ggtgctgccg
      721 tgacgcgccg ggcgctcgcc gtggcgcttg cctgcctgct cgcctcgcat gccgccgcgc
      781 aaggcccgcg catcgagccg ccggccggcg gcctcgtcgg gccaaccctg ggcgggccgg
      841 tcgattccag cgtgccgccc tcggtgccgg cgcagtccac gacgcccgat ctggtggtcg
      901 acctgtcgcg ggcccgcgtg tcgatcacct cggcgttcca gggcgaaagc atcctgctgt
      961 tcggcatgtt cgacccgccg ggcgagatcg tggtcgtcgt cgccggtccg ccggggcgcg
     1021 agacggtgct gcgcaagcag cgcttcctcg gcctgtggct caatatcggc cggcaggcct
     1081 tcgacgacgt tccggcctac tacgccatcg ccgccagtca gccgctgcag cgcctgctcg
     1141 cccgcagcgc cggcggcgag atcctgtcgt tggaggatcg gctggcgagc gtgcgctcgg
     1201 tcggcgagcg cgaacatcag gatctcacca aattccgcct gggcctggtc gaggtgaagc
     1261 gccaggaagg gctctatccc cccgccatcg gccaggtcac catccaggcc caccggctgt
     1321 tccgggttga cctgccgttt ccctcccggt tgccggaagg ggtctacgat gtgaggacct
     1381 atctgttgcg cgacggcaag atcgtcgcgg cggtgtcgcg gccgctgccg gtgggcaagg
     1441 tcggcttcaa cgctgagctt gccagttggg ccacccatga cggtccgctt tacggcctgg
     1501 gggcgatcat cctggcgctc atggccggct ggatcggcgg cgcgatcatg cggcgcctgt
     1561 aagcggcgcg acaacgcgga aagggagcga tcatgagcga gcaacccagc cgatccgagg
     1621 agcgcgtctt cctggtcgtg gtcgatgaaa gcccggaaat gcgcaaggcg cttcgctacg
     1681 cctgccggcg cgccaagcgc acgggcgggc gcgtcgccat gctctacgtc atggagccgc
     1741 cggagggcca gcaatggggc gccgtggtcg acctgatgcg ccaggaagcc cgtcaggaag
     1801 ccgaagccat cgtcgcccgg catgctgatg acgcggtgac gctgaccggt cagccgccgg
     1861 cgatttacat ccgcgaaggc aagagccgcg acgagctgat caagctgctg accgaagacc
     1921 gctcgatctc ggttcttgtg ctgggaggcg cctcgggcag cgagggaccc gggccgttgg
     1981 tcaccgcgtt cgccggcaaa ctcggcaacc agctgcggat cccgctgacc atcgttccag
     2041 gcgctctcac cgaagccgaa atcgatgcca tctcatgaag cgtgagcgaa gtttctgcga
     2101 cgatttggcg ggcgaaagct cggaaccttt ctttgtgtgc gcgatgcgga ttgacgccac
     2161 acccgcgcca cgatcttgca gagcattgaa aaatagtcga aataactata tttaccataa
     2221 tctttataca taaacgttca agaaacagct tgatcgcctc tgcaccggtt cctaggtcaa
     2281 aggtcaacga gtggggaacg gagacgtccc gatcccagcc tgagcgacgc cgagcggtcc
     2341 tgccgcaacg cgttcgagaa ggaggaaggt ttgtttatcc agaccgagca gacgcccaat
     2401 ccatcgaccc tgaagttcct ccctggccgg gtggtcatgg agaagggcac gatggatttt
     2461 gcgtcggccg ataccgccac accctcgccg ctggccaaga ggctgtttgc gatcgaaggc
     2521 gtggagcgcg tgttctttgg ctcggatttc gtgaccgtca ccaaggcggc cgaccgggat
     2581 tggcaggttc tgaagccgtc gatcctgggc gggatcatgg aacactacac gtcgggcgat
     2641 ccggtgatcg ccgacgctgc cgaggccact gcggcttcgg cggacgacga cgaggtcgtc
     2701 gcccagatca aggaacttct cgatacgcgc gtccgtccgg cggtggccca ggatggcggc
     2761 gatatcatat tccaggattt ccgcgatggc gtggtctacc tgcacatgca gggctcgtgc
     2821 tcgggttgcc cgagctcgac tgccacgctg aagatgggga tcgagaatct tctgaagcat
     2881 tacgtgccag aagtgttgga agtgcaggcg gcccagtaag ccgcccgcca atcaagcgta
     2941 cagcgtagtt gcagcgtcgc ggtccgcggg gggaccgtgt gcgggggtcg tttgcgcgac
     3001 ccaactgaaa cgagggtgtg ggatgcagtt gtcgatttgg cccgcggtcg agtgcgggcg
     3061 ccaatacgcg tttccggccg tttgggtggc cgtattcgca acaggggtgg gtctcagcga
     3121 g
//
LOCUS       DASWGA010000107         2178 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1154386, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000107 DASWGA010000000
VERSION     DASWGA010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1154386"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="VF991_02455"
     CDS             complement(<1..306)
                     /locus_tag="VF991_02455"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX9555326.1"
                     /translation="MLLAHGGSDAAWGEAAGVSTPRSARPQQCNAAAFRVVVDVGHSV
                     QKPGARSARGVGEYDFNLHLAKLIEKELIDAGFSRTVLLVTADPPPLGLIKRVAKANS
                     "
     gene            complement(384..1643)
                     /locus_tag="VF991_02460"
     CDS             complement(384..1643)
                     /locus_tag="VF991_02460"
                     /inference="COORDINATES: protein motif:HMM:NF018234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9555327.1"
                     /translation="MNVIQPPQPVLDKRGEPHVRRFEEQRWLLDNIIRANGIDWDQPR
                     SLYLSGPCGNEANADFAGIRERVKKMADIGPAFEAVARRREAKAKAAEEAGHKVSARD
                     NYFMAAVHWGAAQWPYDQNDETNIAYNNKKRECYAKYAALADHHIEAVWVPFQDNAIP
                     AWFHLPPGYKGGRIPVVISIPGMDSFKEIQVALYGDRYLNRGMAVLCIDGPGQYEAPM
                     VGVYFSVENWMAAGKPLVDWLSQRPEIDAERIGCAGTSFGTFFGTILTAYEPRISAFA
                     AMSVCHEPGCHTIFQEASPTFKKRFMYMSGITDEDEFDRFRKTITWEGHADKIRAPYL
                     VVAGECEELSPIEHSERLVKTVKGPKQMVVYQESRHSVGNVPAANLGPFPPVLVADWL
                     ADRLAGKPFASEHWFVRSNGQIDKTAY"
     gene            complement(1923..>2178)
                     /locus_tag="VF991_02465"
     CDS             complement(1923..>2178)
                     /locus_tag="VF991_02465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9555328.1"
                     /translation="YGMPRADILPPFRTEIAEVLSPTNPLGIKAGGEGGTTAAPAVVV
                     SAIVDALRDYGVRDLKMPATPYRIWQAIQAAKAARKTARM"
BASE COUNT          347 a          707 c          709 g          415 t
ORIGIN      
        1 gctgttggcc ttggccacgc gcttgatcag gccgagcggc ggcggatctg ccgtgacaag
       61 cagaacggtc ctgctgaagc cggcgtcgat cagctccttc tcgatcagct tggcaagatg
      121 gaggttgaag tcgtattcgc cgacgccgcg cgcgctccgc gcgccgggct tctggacgct
      181 gtgcccgacg tccacgacca cgcgaaacgc tgcggcgttg cattgctgcg gacgggctga
      241 cctgggcgtg gacacgccgg cggcttcacc ccacgcagca tccgagccgc cgtgcgccag
      301 cagcatcgat agggccacga gcgcaatcat tccgacgcag cgtggatacg tcatggggtc
      361 ggcgtccgcc gtgaagctac tactcaatat gccgtcttat cgatctggcc gttcgagcgc
      421 acgaaccaat gctcgctcgc gaacggctta cccgcgagcc ggtctgccag ccaatccgcc
      481 accaggaccg gtgggaatgg tccgaggttc gccgccggca cgttgccgac cgagtggcgc
      541 gattcctggt agaccaccat ctgcttcggt cccttgaccg tcttcaccag ccgctccgaa
      601 tgctcgatcg ggctcagctc ctcgcactcg ccggcgacca cgagataagg cgcacggatc
      661 ttgtcggcat ggccttccca ggtgatggtc ttgcggaagc ggtcgaactc gtcctcgtcg
      721 gtgatgcccg acatgtacat gaagcgcttc ttgaaggtcg gcgacgcctc ctggaagatg
      781 gtgtggcagc ccggctcatg gcacaccgac atggcggcga aggcgctgat gcgcggctcg
      841 taggcggtca ggatggtgcc gaagaaggta ccgaagctgg tgccggcgca tccgatgcgt
      901 tcggcgtcga tctcgggccg ttggctcagc caatccacca gcggcttgcc cgccgccatc
      961 cagttctcca cggagaaata gacgccgacc atgggcgctt cgtattggcc cggtccgtcg
     1021 atacaaagga ctgccatgcc gcggttgagg tagcggtcgc cataaagtgc gacctggatc
     1081 tccttgaagc tgtccatgcc gggaatcgag atcaccaccg ggatgcggcc gcccttgtag
     1141 cccggcggca agtggaacca ggccgggatc gcattgtcct ggaacggcac ccagaccgcc
     1201 tcgatgtgat gatcggcgag cgcggcgtat ttggcgtagc actcgcgctt cttgttgttg
     1261 taggcgatgt tggtctcgtc gttctggtcg tagggccact gcgccgcgcc ccagtgcacc
     1321 gccgccatga agtaattgtc gcgggcgctg accttgtggc cggcctcctc ggcggctttc
     1381 gccttcgctt cacgccggcg cgcgaccgcc tcgaacgccg gcccgatgtc ggccatcttc
     1441 ttcacccgct cgcggatgcc ggcgaaatcg gcattggcct cgttgccgca ggggccgctg
     1501 agatagagcg agcgcggctg gtcccagtcg atgccgttgg cgcggatgat gttgtcgagc
     1561 agccagcgct gctcctcgaa acggcgcacg tgcggctcgc cgcgcttgtc gagaacgggt
     1621 tgcggtggct ggatcacgtt catggcttct ctcccatgac taagtttttg cacgagttgt
     1681 gtgttctagg acacatgcca attctagcgc acgtttcgat gagatgcggt cggcttgacc
     1741 ggcaaactcg acgcgctccc tctccccatt tggggagacg ggcggggtga gggggttacc
     1801 agcctgtcga taggcttgtc gagagaccat aacccctcac cccacccctc tccctacggg
     1861 agagggagca gaccgagtct gttgcccgca ctgatctcac ctcaccgaaa cgtgccccag
     1921 catcacatcc gcgcggtttt tcgagccgcc ttggccgctt ggatcgcctg ccagatccgg
     1981 tagggcgtcg ccggcatctt gaggtcgcgc acgccgtagt cgcgcagcgc gtcgacgatc
     2041 gcgctgacga cgacggctgg agctgcggtg gtgccgccct cgccgccggc cttgatgccg
     2101 agcgggttgg tcggcgacag cacttcggcg atctcggtgc gaaacggcgg caagatgtcg
     2161 gcgcgcggca tgccgtag
//
LOCUS       DASWGA010000108         7713 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1912855, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000108 DASWGA010000000
VERSION     DASWGA010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7713
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1912855"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VF991_02470"
     CDS             complement(<1..413)
                     /locus_tag="VF991_02470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX9555329.1"
                     /translation="MRRTIKGDVLFDAASRGRYSTDASIYQVEPVGVVVPRDEADLAL
                     VVDVARDAKAAILARGAGTSQCGQAVGQALIVDVSKYLREVVGFDKNRAEVTVQPGIV
                     LDQLNAWLKPHGLWYPVDVSTSAQCTLGGMAGNNS"
     gene            498..1691
                     /locus_tag="VF991_02475"
     CDS             498..1691
                     /locus_tag="VF991_02475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9555330.1"
                     /translation="MRLNSHPSGRHFLQIPGPTNVPDRILRAMDYPTIDHRGPEFNAL
                     AKKVLRSIRQVFQTRQPVIVYPASGTGAWEAALVNTLSAGDLVLMWETGHFASLWKKM
                     ADKLGIKSEFMGGDWRKPADPAAIEKRLKEDKEHAIKAVCIVHNETSTGVVSDIGAVR
                     RAIDAAKHPALLLVDTISSLGSIDYRHDAWGVDVTVAGSQKGLMLPPGLSFNAVSEKA
                     LAASQTSKLPKAFWSWDDMLAANANGWFPYTPATNLFYGLSEACDMLLEEGLDSVFAR
                     HARHAEATRTAVTAWGLEILCSDPKAYSGSLTAIVMPEGHDADAFRKVALENFNLSLG
                     QGLTKVAGKVFRIGHLGDFNDLMLMGTLSGVEMALGLAKVPHKTGGVQAALTYLRDTA
                     PGARH"
     gene            complement(1713..2636)
                     /locus_tag="VF991_02480"
     CDS             complement(1713..2636)
                     /locus_tag="VF991_02480"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555331.1"
                     /translation="MAIILQESLRALFYAPFYVALARKAFAVEGVEIRFTSSPRPQDA
                     ALRLMDGTVDVCWGGPMRVMETYQKRPDCDIVCFAEVVTRDPFLLMGREPRPDFTLAD
                     LKSARLATVSEVPTPWLCLQHDLRLAGIDPASIARVADQTMARNAAALKAGEVDVIQV
                     FEPFPSLLVAEGAAHVWYAAARRGPTSYTTFYARRGLLATRRDELQRMTRAIHRTEKW
                     VANAGGREIARTISGYFGDMPTAILEAACARYKALGIWSDTPMLPRAGYDRLRDGLVS
                     GGFVSPGATFETAVDNTLAASVVAEQLPPLD"
     gene            2719..3612
                     /locus_tag="VF991_02485"
     CDS             2719..3612
                     /locus_tag="VF991_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007756292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9555332.1"
                     /translation="MPHIKTDDGVQLYYEEAGHGEPILFLHEFGGHYRSWEPQIGYFS
                     RRYRCIAYAARGWPPSDVPDDVAAYSQARAADDAAAVMAALGIAKAHLVGLSMGATAG
                     IEFAIRHPGKALSLTIAAGGGGGSSDAAEKARFQQDCEAFAQRIERDGMPAMAELYCA
                     GPARVQYRTKDPRGWAEFKQQFADGSAMGHAMTMRGIQGARQPFFERTAELQKIQDPM
                     LVIIGDEDDSTHGLAVHLKKNVPRCGVLELPKTGHTINLEEPAAFNSAVQDFLHAVEH
                     GRWTERDAVARQGYTLIPPSR"
     gene            complement(3750..4727)
                     /locus_tag="VF991_02490"
     CDS             complement(3750..4727)
                     /locus_tag="VF991_02490"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrtA/SsuA/CpmA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX9555333.1"
                     /translation="MRNVVKSILVAAAALAASALDASAQPRTKMTIATGVDPAFSQFY
                     VAKEAGLFEKNGLDVTINTGPSGSAMVPFLINNQVQAAYGSDLAGVINHNVDNNVVAV
                     ADGTYLVKWLSVVGRNVQSLDELKGKRIGIAKGTGSEIFWNHVLAKRNLQAADFKIVD
                     IEAPEMLAATERGDIEGFAVWEPWPTRTLQAVKGTKILQDAEGIYNNINFVYMNRGWI
                     EQNRETAERFMLSLVQANDLIGQDRPAAAKMVAKFLKMPLELAVELMPKVEFDMTWTD
                     RAVATIKIAEEQLASQKKLKAPLDYTKYVYTDLLKKVRPENVKITQLPK"
     gene            complement(4742..5503)
                     /locus_tag="VF991_02495"
     CDS             complement(4742..5503)
                     /locus_tag="VF991_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018427310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9555334.1"
                     /translation="MRQWLGRLAGYLLGFASLFLIWHFASTWLLNSVLFPPPWRVIVK
                     AVELTEEGVLGDQVMVSMMRIFTGFLGGTLIGIPVGLAIGSFTVVRRLLEPYTEFFRF
                     IPATALITVAVIWFGIGEGSKVFLIIYTTVFIIIINTAAGVAAVAPNKIRAARSLGAS
                     RAQVFFFVALPATVPYILTGMRLAMANSFVTIIAAELVAANSGLGKMIWDSRMYMLVD
                     QIFVALLVLGLLGFTTDRLFRWGIYAFAGRFSPVT"
     gene            complement(5503..6288)
                     /locus_tag="VF991_02500"
     CDS             complement(5503..6288)
                     /locus_tag="VF991_02500"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011993163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555335.1"
                     /translation="MALVQLANVSKVYRSLRGTDYEAVRDFSLDIEPGEFFCLLGTSG
                     CGKTTVLNMVAGFERATSGDIRIGGAAIDGPGADRGVVFQGDDSLYSWLTALGNVEFG
                     LRMRGIPRRERDQRARQYLELVGLTGQEHKHPTELSGGMKQRIQIARVLANEPQMLLM
                     DEPFAALDAHTRAAMQRELLSIWRATGKTVLFITHDVDEAIILATKIGVMHAGPASKL
                     KGVVDVTLSETERDRTHDRFVAAYRQVHEMIRDEVAISLQRAH"
     gene            complement(6444..7193)
                     /locus_tag="VF991_02505"
     CDS             complement(6444..7193)
                     /locus_tag="VF991_02505"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEX9555336.1"
                     /translation="MHQLPEISRGNLSLAQIEVQGAGGPPQRRAVTDDEMRQILNAAG
                     RRIHAPAAQVCGEMNVGVCQWQFRAMRDTSLNAGAGPNGLIMVNRGIVEYAANQEEVC
                     LVIAHEMGHQAANHVAAGQRNQAVGALVGAILLGAVGAAASYGSYGSAQVIRSAAQTG
                     ANVGGAVGRISFSKEQEREADYLAAVILYRAGVDLDKARGFLVTMARASGQKETGMLD
                     THPAGPERIAGWDRAVQQIRASNGRLPPRAS"
     gene            complement(7319..>7713)
                     /locus_tag="VF991_02510"
     CDS             complement(7319..>7713)
                     /locus_tag="VF991_02510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018425835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555337.1"
                     /translation="YGLAYLFISHDLAVMRHISHRIAVMYLGRIVELADKRTLFTRPL
                     HPYTEALLSAATAPDPKRRRQRKRIVQGDVPSPAKPPPGCHFHTRCPYAIAECRVTAP
                     PLIEVAPGHHVACLRRPVGGDPGPLPIT"
BASE COUNT         1321 a         2537 c         2593 g         1262 t
ORIGIN      
        1 caggaattgt tgccggccat gccgcccagg gtgcattgcg ccgaagtcga gacatcgacc
       61 gggtaccaga ggccatgcgg cttcagccag gcgttgagct ggtcgagcac gatgccgggc
      121 tggaccgtga cctcggcgcg gttcttgtcg aagcccacga cctcgcgcag gtacttcgag
      181 acgtcgacga tcagcgcctg gcccaccgcc tggccgcact gcgaggtgcc ggcgccgcgc
      241 gccaggatcg cggccttggc gtcgcgcgcc acgtcgacca ccagggcgag gtcggcctcg
      301 tcgcgcggca cgaccacgcc caccggctcg acctggtaga tcgaggcgtc ggtcgagtag
      361 cgcccgcgcg aggcggcgtc gaaaaggacg tcgcccttga tggtgcggcg caaggtctgt
      421 tcgagcgtag tcagtcgggg ttcactccgg tctcacttat tgtatacaga acgttggatg
      481 cccggagagc cataaaaatg cgcctgaact cacatcccag cggccggcac tttttgcaga
      541 ttcccgggcc gaccaacgtg cccgaccgca tcctgcgggc aatggactat ccgacgatcg
      601 atcatcgcgg gccggaattc aacgcgctgg ccaagaaggt cctgcgcagc atccgccagg
      661 tcttccagac caggcagccg gtgatcgtct atcccgcgtc gggcaccggc gcctgggaag
      721 ccgccctggt gaacacgctg tcggccggcg acctggtgct gatgtgggag accggccact
      781 tcgcctcgct gtggaagaag atggccgaca agctcggcat caagtcggaa ttcatgggcg
      841 gcgactggcg caagcccgcc gatcccgcgg ccatcgagaa gcgcctgaag gaggacaagg
      901 agcacgccat caaggccgtt tgcatcgtgc ataacgaaac ctcgaccggc gtggtgagcg
      961 acatcggcgc cgtccgccgc gccatcgatg cggcaaagca ccctgccctg ctgctggtcg
     1021 acaccatctc ctcgctgggc tcgatcgact accgccacga cgcctggggc gtcgacgtca
     1081 cggtggcggg ctcgcagaaa ggcctgatgc tgccgcccgg actttccttc aacgcggtga
     1141 gcgagaaggc gctcgccgct tcccagacgt cgaagctgcc caaggccttc tggagctggg
     1201 acgacatgct ggccgcgaac gccaacggct ggttccccta cacgccggcc accaacctgt
     1261 tctacggcct gagcgaagcc tgcgacatgc tgctcgagga aggcctcgac tccgtgttcg
     1321 cccgtcacgc ccgccatgcc gaggcgacgc gcaccgcggt gacggcgtgg ggcctggaaa
     1381 tcctgtgcag cgatcccaag gcctactcgg gctcgctgac ggccatcgtc atgcccgagg
     1441 gccacgacgc cgacgccttc cgcaaagtgg cgctggagaa cttcaacctg tcgctcggcc
     1501 agggcctcac caaggtcgcg ggcaaggtgt tccgcatcgg ccatctcggc gacttcaacg
     1561 acctcatgct gatgggcacg ctgtcgggcg tggagatggc cttgggtctg gccaaggtgc
     1621 cgcacaagac gggcggcgtg caggccgctc tgacctacct gcgcgacacg gcgccgggcg
     1681 cccgccactg agccgcggcg gccgtgcccg cttcaatcga gcggcggtag ctgctcggcc
     1741 accacggaag cggccagcgt attgtcgacg gcggtctcga aagtcgcccc gggagagacg
     1801 aatccgcccg acaccagacc gtcgcgcagc cgatcgtaac cggcgcgcgg cagcatcggc
     1861 gtgtcgctcc agatgccgag cgccttgtag cgcgcgcagg cggcctcgag gattgccgtt
     1921 ggcatgtcgc cgaagtagcc cgagatggtc cgggcaatct ctcggccgcc ggcgttcgcc
     1981 acccacttct ctgtgcgatg gatcgcccgc gtcatgcgct gcagctcgtc ccgtcgcgtc
     2041 gccagcaagc cgcggcgcgc ataaaaggtc gtgtaggacg tgggcccgcg gcgcgccgcc
     2101 gcgtaccaga catgcgcggc gccctcggcc accagcaggc tgggaaaggg ctcgaacacc
     2161 tggatgacgt cgacttcgcc cgctttgagc gccgccgcgt tgcgcgccat ggtctggtcg
     2221 gcgacccgcg ctatgctcgc gggatcgatg ccggcaagac gcagatcgtg ctgcaggcag
     2281 agccacggag tcggcacctc gctgactgtg gcaagccgcg ccgatttgag gtcggcgagc
     2341 gtgaagtcgg gccggggctc gcggcccatc agcaggaacg gatcgcgcgt cacgacctcg
     2401 gcgaagcaga cgatgtcgca gtccggccgc ttttgatagg tctccatgac ccgcatcggc
     2461 ccgccccagc agacgtccac cgttccgtcc atcaggcgaa gggctgcgtc ctgcgggcgc
     2521 ggcgagctgg tgaagcggat ctccacgccc tcgacggcga aggccttgcg cgcgagcgcc
     2581 acgtagaagg gcgcatagaa cagcgcgcgc agggattcct gaagaatgat ggccatgccg
     2641 ggcggacctt tttgagacgc gacggtcgac aacatgcgcg gcggatcgct aagccggcaa
     2701 ggatggggga ggacgacgat gccgcacatc aaaaccgacg acggcgtgca gctctactac
     2761 gaggaggcgg gccacggcga gccgatcctg ttcctccacg aattcggcgg gcattaccgg
     2821 agctgggagc cgcagatcgg ttacttctcg cgtcgctatc gctgcatcgc ctacgccgcg
     2881 cgcggttggc cgccgtccga cgtgccggat gacgtcgcgg cctattcgca ggcgcgcgcg
     2941 gccgacgacg cggcggcggt gatggcggcg ctgggcatcg ccaaggcgca tctggtcggc
     3001 ctgtcgatgg gcgccaccgc cggcatcgag ttcgccatcc gccatcccgg caaggcactg
     3061 tcgctcacca tcgcggcggg cggtggcggc ggcagcagcg atgccgcgga gaaggccagg
     3121 ttccagcagg attgcgaggc cttcgcccaa cgcatcgagc gcgacggcat gccggccatg
     3181 gccgagctct attgtgccgg cccggcgcgg gtgcagtacc gcaccaagga cccgcgcggc
     3241 tgggccgagt tcaagcagca gttcgccgat ggttcggcca tgggtcacgc catgaccatg
     3301 cgcggcatcc agggtgcgcg tcagccgttc ttcgagcgca cggcggagct gcagaagatc
     3361 caggatccca tgctggtgat catcggcgac gaggacgatt caacgcacgg cctcgccgtg
     3421 catctcaaga agaacgtccc gcgctgcggc gtgctcgaac ttcccaagac cggccacacc
     3481 ataaatctcg aggagccggc cgccttcaat tcagccgtgc aggacttcct ccatgccgtc
     3541 gagcacggac gctggaccga gcgcgacgcc gtggcgcgtc agggctacac gctgattccg
     3601 ccgagccgct aaggcgtgga cacatcgtcg actcaagctc ctctcccccg cttgggggag
     3661 aggacgggtg agggggatgc gcacgtcttt gccccctcac ctagcctctc cccctagcgg
     3721 gggagaggaa tttgagtgcc ggcaggaggt tacttcggca gctgggtgat cttgacgttc
     3781 tccggccgga ccttcttcaa gaggtcggtg tagacgtact tggtgtagtc gagcggcgcc
     3841 ttgagcttct tctgcgacgc aagctgctcc tcagcgatct tgatggtggc gacggcgcgg
     3901 tcggtccagg tcatgtcgaa ctcgaccttg ggcatcagct cgaccgcgag ctcgagcggc
     3961 atcttgagga acttggcgac catcttggcg gcggccgggc ggtcctggcc gatcaggtcg
     4021 ttggcctgca ccagcgacag catgaacctc tcggcggtct cgcggttctg ctcgatccag
     4081 ccgcggttca tgtagacgaa gttgatgttg ttgtagatgc cttcggcgtc ctgcaggatc
     4141 ttggtaccct tgacggcctg cagcgtgcgc gtcggccacg gctcccacac ggcaaagccc
     4201 tcgatgtcgc cgcgttcggt ggcggccagc atctcgggcg cctcgatgtc gacgatcttg
     4261 aagtccgctg cctggagatt tcgcttggcc agcacgtggt tccagaagat ctcgctgccg
     4321 gtgcccttgg cgatgccgat gcgcttgccc ttgagctcgt ccaggctctg cacgttgcgg
     4381 ccgaccaccg acagccactt cacgagatag gtgccgtcgg cgacggcgac gacgttgttg
     4441 tcgacgttat ggttgatgac gccggcgagg tccgagccgt aggcagcctg cacctggttg
     4501 ttgatcagga acggcaccat ggccgagccc gaggggccgg tattgatggt gacgtcgagc
     4561 ccgttcttct cgaacaggcc ggcctccttg gcgacgtaga actgggagaa ggccggatcg
     4621 acgccggtgg cgatggtcat cttggtccgc ggctgcgcgc tcgcatcgag cgcgctggcc
     4681 gccagtgccg cagcggcgac caggattgat ttcacgacgt tgcgcattgt cccctccccg
     4741 ttcacgtcac cggcgagaag cggccggcaa aggcatagat cccccagcgg aacagccggt
     4801 cggtggtgaa gccgagcagc cccaggacga gcagggcgac gaagatctgg tcgaccagca
     4861 tgtacatccg cgaatcccag atcatcttac ccagtccgct gttggcggca acgagctcgg
     4921 cggcgatgat ggtgacgaac gaattggcca tggcaaggcg catgcctgtc aggatgtagg
     4981 gcaccgtggc gggcagcgcg acgaagaaga agacctgggc gcggctggcg cccagcgacc
     5041 gggcggcgcg gatcttgttg ggtgccacgg ccgccacacc agcggcggtg ttgatgatga
     5101 tgatgaacac cgtcgtgtag atgatcagga agaccttcga gccctcgccg atgccgaacc
     5161 agatgacggc gaccgtgatc aacgcggtcg ccgggatgaa gcggaagaac tcggtgtaag
     5221 gctcgagcag gcggcgcacg acggtgaacg atccgatggc aagcccgacg gggatgccga
     5281 tcagcgttcc gccgaggaag ccggtgaaga tccgcatcat gctcaccatc acctgatcgc
     5341 cgaggacgcc ctcctcggtg agctcgaccg ccttgacgat gacgcgccag ggcggcggga
     5401 acaggacgga attcagcagc cacgtcgagg cgaagtgcca gatcaggaac aggctggcga
     5461 agcccagcag ataaccggcg agcctcccca accactgccg catcagtgcg cccgttgcag
     5521 ggagatcgcg acttcgtcgc ggatcatctc atgcacctgg cggtaggcgg cgacgaagcg
     5581 atcgtgggtg cgatcgcgct cggtctcgct cagggtgacg tcgacgacgc ccttgagctt
     5641 cgatgccggc cccgcgtgca tgacgccgat cttggtcgcc aggatgatcg cctcgtcgac
     5701 gtcgtgggtg atgaacaata ccgtcttgcc ggtcgctcgc cagatgctta aaagctcgcg
     5761 ctgcatcgcg gcgcgcgtat gggcgtcgag cgcggcgaac ggctcgtcca tcagcagcat
     5821 ctgcggctcg ttggcgagca cgcgcgcgat ctggatgcgc tgcttcatgc cgccggaaag
     5881 ttcggtcgga tgcttgtgct cctggccggt gagcccgacc agctcgaggt attgccgggc
     5941 tctctggtcg cgctcgcgac gtggaatgcc gcgcatgcgc aggccgaatt cgacattgcc
     6001 gagggcggtg agccacgaat aaagcgaatc gtcgccctgg aagacgacgc cgcggtccgc
     6061 gcccggcccg tcaatcgccg caccaccgat ccggatgtcg cctgaggtcg cgcgctcgaa
     6121 gcctgcgacc atgttgagga cggtggtctt gccgcagccg ctggtgccca gcaggcagaa
     6181 gaactcgccg ggctcgatgt cgagcgagaa gtcgcgcacg gcttcatagt cagtcccccg
     6241 cagggagcgg tagaccttgc tgacatttgc gagctgcacg agcgccacga cgtcttcccc
     6301 attcggccgc cttcctgcca ggcggttcgc cgacccacgt cggttgcgct atcacgcgcg
     6361 ccgcgccggc gtccaggcat gtctaacagc ggttccggcg aggcgggagt cgagaaacag
     6421 ggatagtcgt gcgggaccgg cggtcaggaa gctcgcggtg gcaaccgtcc gttcgatgca
     6481 cggatttgct gaaccgcccg atcccaaccg gcaatccgct cgggacccgc cgggtgtgtg
     6541 tccagcattc ccgtctcctt ctgtcccgac gctctcgcca tcgtgaccag gaagccccgc
     6601 gccttatcga gatccacgcc ggcgcggtac aggatcaccg ccgccaggta gtccgcctct
     6661 cgctcctgtt ccttcgagaa cgatatccgg ccaacagcgc cgccaacatt cgctcccgtc
     6721 tgcgcggcgg aacggatgac ttgggcgctg ccgtaactgc cgtacgatgc agcggcgccg
     6781 acagcgccca gaagaatggc gccgaccagg gcgccaaccg cctggttgcg ctgacccgcc
     6841 gcgacgtggt tggccgcctg atggcccatc tcatgggcga tcaccaggca gacttcttct
     6901 tggtttgccg cgtactcgac gatgccacgg ttgaccatga tcaacccgtt cggcccggcg
     6961 ccggcattca gggacgtgtc ccgcatcgca cgaaactgcc attggcacac gccgacattc
     7021 atctccccgc agacttgagc ggcgggtgcg tgaattcgcc gacccgcggc attcaggatt
     7081 tgacgcattt cgtcatcggt tacggcacgg cgctgcggcg gtccacccgc gccctgcacc
     7141 tcgatttgcg ccagactgag attgccccgg ctaatctccg gcagctggtg caccgcaccg
     7201 gaacatccgc agaccaagca tgctcccgaa agagccataa aagaccgccg tcgcatgggt
     7261 tcatcctcct cttccgggag gacgaaatgg caaaggcgag tgttacagag aaatcgcgct
     7321 aagttatcgg cagtggcccc ggatcgccgc cgacggggcg gcgcagacaa gcgacgtggt
     7381 gacctggcgc gacctcgatc agcggcggcg ccgtcacccg gcactcggcg atcgcgtacg
     7441 gacagcgcgt gtggaaatgg cagccgggcg gcggcttggc cgggctcggc acgtcgccct
     7501 gcacgatgcg cttgcgctgc cggcggcgct tggggtcggg cgcggtggcg gccgacagca
     7561 gcgcctcggt gtagggatgc agcgggcggg tgaacagcgt gcgcttgtcg gcgagctcga
     7621 cgatgcggcc gagatacatc accgcgatgc gatggctgat atggcgcatc acggcgaggt
     7681 cgtggctgat gaagagatag gcgagcccgt att
//
LOCUS       DASWGA010000109         1894 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1155435, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000109 DASWGA010000000
VERSION     DASWGA010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1155435"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VF991_02515"
     CDS             <1..191
                     /locus_tag="VF991_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555338.1"
                     /translation="ALERRRWKIQGRHAIDRGAEFSILGLAERCALLRELRLRCGGQS
                     GGEKRQGKQGTPKHGALD"
     gene            complement(277..1071)
                     /locus_tag="VF991_02520"
     CDS             complement(277..1071)
                     /locus_tag="VF991_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009756455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555339.1"
                     /translation="MLAINNIEVVYDRVILVLKGVSIGVDEGSITTLLGANGAGKTTT
                     LKAISGVLNSERGEVTKGTIQLGERRIDGMRAHDVTRLGLVQVFEGRRVFENLTTEEN
                     LVAGGHVHKDGGLVKQGIELVYSYFPKLKERRHQLSGYLSGGEQQMLAIGRALMSRPR
                     VVLLDEPSLGLAPMLVEEIFGIVGRLVKQEKLSVLLVEQNAAMALAVADHGYVMENGR
                     IVLEGPADKLRDNSDIKEFYRGLNEGGARKSYRDTKHYKRRKRWLS"
     gene            complement(1116..>1894)
                     /locus_tag="VF991_02525"
     CDS             complement(1116..>1894)
                     /locus_tag="VF991_02525"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555340.1"
                     /translation="AFVKEKLGDLKGKKIAYLFYDNPAGKEPLAVLEDLAKSEGFEMR
                     TFAVPAPGLEMGAQVLDITGRYKPDFIIAHLFGRSPSVSIKELKGKGFPLSKVISLVW
                     GSAESDIIAAGGMGMAEGYNTIQFAGVGKDFPVLKEIEAMYKAQGKPAPKEMDSTVYY
                     NRGVLNAAIHVEALRNAIKAKGGAMPTSEDVKKGMESIKGFTLGGFVPPMEITPTDHE
                     GGGWVQIWTVKGGKLVKVKDWFQGYRPVIQKQLAADASKS"
BASE COUNT          308 a          623 c          602 g          361 t
ORIGIN      
        1 acgcgctcga gcgccggcgg tggaaaatcc agggccgtca cgcgatcgac cgaggggctg
       61 agttttcgat actgggcctc gccgaacgct gcgcattgct gcgcgagctt cgtctgcgct
      121 gcggcgggca gagcggcggc gagaagaggc agggcaagca gggaacgcca aagcatggag
      181 cgttagatta gcccctaggc ccgcgtcttg tcttcgctgg gcgcgccact ccagtggagc
      241 gatcatgatc ttccggaccg cgggcgttcc ggaagactaa gatagccagc gtttgcgccg
      301 cttgtaatgc ttggtgtcgc gataggattt gcgcgccccg ccctcgttga ggccgcgata
      361 gaactccttg atatcggaat tgtcgcgcaa tttgtcggct ggtccctcca gcacaatacg
      421 gccgttttcc atgacatatc cgtgatcggc gacggccagc gccatggcgg cattctgctc
      481 gaccagcagg accgaaagct tttcctgctt caccagccgg ccgacgatgc cgaagatctc
      541 ctcgaccagc atgggggcga ggccgagcga cggctcgtcg agcagcacca cccggggccg
      601 gctcatcagc gcccggccga tcgccagcat ctgctgctcg ccgccggaca ggtagcccga
      661 gagctggtgc cgccgctcct tgagcttcgg aaagtaggaa tagaccagct cgattccctg
      721 tttcaccaag ccgccgtcct tgtggacgtg gccgccggcg accaggttct cctccgtggt
      781 caggttctcg aatacgcgcc gcccctcgaa cacctggacg aggccgagcc gcgtgacgtc
      841 gtgggctcgc atgccgtcga tgcgccgctc gccgagctgg atcgtgccct tggtgacctc
      901 gccgcgctcg ctgttcagca cgccggaaat ggccttcagc gtcgtcgtct tgccggcgcc
      961 gttggcgccc agcagggtcg tgatcgagcc ctcatcgacg ccgatcgaca cgcccttcag
     1021 gacgaggatg acgcggtcgt agacgacttc gatgttgttg atcgccagca tgggaaagag
     1081 ggcggcgatc gctcgccgcc cgcctgtcga tgcgttcagg acttcgaggc gtcagccgcg
     1141 agctgcttct ggatcaccgg gcgatagccc tggaaccagt ccttcacctt cacgagcttg
     1201 ccgcccttga cggtccagat ctgcacccag ccgccgcctt catggtcggt gggggtaatc
     1261 tccatcggcg gcacgaagcc gcccagggtg aagcccttga tcgactccat gcctttcttc
     1321 acgtcctccg aggtcggcat ggcgccgccc ttggccttga tggcgttacg cagcgcctcg
     1381 acatggatcg ccgcattcag gacgccgcgg ttgtagtaga cggtcgagtc catttccttg
     1441 ggcgcgggct tgccctgcgc cttgtacatg gcctcgatct ccttcagcac cgggaagtcc
     1501 ttgccgacgc cggcgaactg gatggtgttg tagccttcgg ccatgcccat gccgcccgcc
     1561 gcgatgatgt cggactcggc gctgccccag accagggaga tcactttgct gagcgggaag
     1621 cccttgccct tcagctcctt gatggagacc gaaggcgagc gcccgaacag gtgggcaatg
     1681 atgaagtccg gcttgtagcg gccggtgatg tcgaggacct gcgcccccat ctccaggccc
     1741 ggcgccggga cggcgaaggt gcgcatctcg aagccctcgg acttggcgag atcttccagg
     1801 acggccagcg gctccttgcc cgccggattg tcgtagaaca gataggcgat cttcttgccc
     1861 ttgaggtcgc ccagcttctc cttgacgaaa gcca
//
LOCUS       DASWGA010000110         3510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_393522, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000110 DASWGA010000000
VERSION     DASWGA010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3510
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393522"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..307)
                     /locus_tag="VF991_02530"
     CDS             complement(<1..307)
                     /locus_tag="VF991_02530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEX9555341.1"
                     /translation="MPPLHPLLLGFTVALGVGLLIGIDRERRKGEGPARQAAGLRTFT
                     LASLSGAAAIAAGGEVALAAVTLGVVAFSGLSYWRARDEDPGLTTETALVLTTLLGGL
                     "
     gene            416..1354
                     /locus_tag="VF991_02535"
     CDS             416..1354
                     /locus_tag="VF991_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9555342.1"
                     /translation="MSVVSTTSVDGIEPDRAIAVRRRRPWLLPYALLAPSLLFLALFT
                     YLPVVRVAVESLYDKPHGTGAAISYVGLGNYAKVLADPAFQKAALNNLIYAVGVLVPT
                     LVLALAFALAVQRSTRFAGVLRTVFFLPSLVPLVAAASLFFFIFLPGIGLLDYYLAKL
                     GLHGPNWLGDSDIALWSVIGLTVWKNAGYYMLFYIAGLQNVPRDTVEAAMIDGANAWQ
                     RLRFVILPALAPTTAFVTVIALIQLLTSVDHVIVLTRGGPSNATNLLLYYIFQSAHEN
                     FEYGKAAAATLISVAILLAISFGSLRVMERGARGAA"
     gene            1344..2180
                     /locus_tag="VF991_02540"
     CDS             1344..2180
                     /locus_tag="VF991_02540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9555343.1"
                     /translation="MQLNKQLSAALLAALLSAVAFLWASPFLWTLVASFRPEGAGSAD
                     MASLLPDLHPTLENFRNALESGSFGLYYVNTIIVVAGVLAVQCVTVSLAGYAFARLRF
                     RGRDVLFYAFLLQLMLVPPALIVPNLRTVVDLGLYDTLPGVMAPYFASAFGTFLMRQT
                     FLALPRDFEEAAAIDGAPWWAIIWYVLLPMAKPGLVAFAIVSITAHWNEFLWPLMVIS
                     DPANHTLTIGLAAFTRGAEGGKEWGVLAAGTLLVMAPLAVAFIAFQRRFVDSFVFSGV
                     KG"
     gene            2310..>3510
                     /locus_tag="VF991_02545"
     CDS             2310..>3510
                     /locus_tag="VF991_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555344.1"
                     /translation="MSLIRCLSVGALALSLTAALPVWAQTKIEFFFPVPVEGKLAKEM
                     TRLVKLYNEGQKEVEVTAVYTGGYDDTKLKAQAAAKAGKPPSVVLMSANFNVDLKLSG
                     DIISLEPMLKADKTTREDFLSDFWRALHANAVVDGELYGVPFQNSTPLLYYNVEHFKE
                     AGLDPSKPPRTWSELVDAAKKLTKGDRHGFLMPAGYDYLGWLMEALTMSNGGRYFNEE
                     YGGEVYYDQPSTLGAARFVEDLIFKHKVMPQGITEAGGVSTAFFAGKASMVLLSTGSL
                     SFIRENMKQPYDVAFVPKNVRNAVPIGGASLVMFAGQSEDSKKAGWKFIKWLTTPETI
                     GGWSRFTGYFAPRKSAYDKPEMKDFLAKNLDATVALEQLAFAKPWFATYQTVAVRKAL
                     EDEIQAMM"
BASE COUNT          557 a         1204 c         1083 g          666 t
ORIGIN      
        1 ccaggccgcc gagaagcgtc gtcaggacca gcgccgtctc ggttgtgagg ccagggtcct
       61 cgtcacgggc ccgccagtag gagaggccgg agaacgccac gacgcccagg gtgaccgcgg
      121 ccagggccac ttcgccgccc gccgcaatgg ctgcggcacc cgagagcgag gccagtgtaa
      181 aggtgcgcaa gcccgccgcc tgccgcgccg gaccctcacc tttgcggcgc tcccggtcga
      241 tgccgatcag caaaccgacg ccaagggcga ccgtgaaacc gagcaggaga ggatggagag
      301 ggggcataga ccgtccaggg tagggcggcc attatccccg ttgtcctcgc gtccgtcacg
      361 taaccgtagc ccagatgtaa cctgaccttg tttcccgctg cctatggacc ggcctatgag
      421 cgtggtcagc acgacctcag tcgatggcat cgagcccgac cgcgccatag cggtccggcg
      481 tcgccggccg tggctgctgc cttacgccct gctggcgccc tcgctcttgt tcctcgccct
      541 gttcacctac ctgccggtgg tgcgcgtcgc cgtcgaatcg ctctatgaca agccgcacgg
      601 caccggggcg gctatttcct acgtcgggct cggcaactac gccaaggtgc tggccgatcc
      661 ggccttccag aaggccgcgc tcaacaacct gatctatgcc gtgggcgtgc tggtgccgac
      721 cctggtgctg gcgctcgcct tcgcgctcgc cgtccagcgc tcgacgcgct tcgccggcgt
      781 cctgcggacg gtattcttcc ttccctcgct ggtgccgttg gtcgccgcag cctcgctgtt
      841 ctttttcatc ttcctgcccg gcattggcct gctcgactac tacctggcca agctcggcct
      901 gcacggaccc aactggctgg gcgattccga catcgcgctg tggtcggtga tcgggctgac
      961 ggtgtggaag aacgccggct actacatgct gttctacatc gccggtctgc agaacgtgcc
     1021 gcgcgatacc gtcgaggcgg cgatgatcga cggcgccaat gcctggcagc gcctgcgctt
     1081 cgtcatcctg ccggcactgg cgccgaccac cgccttcgtg acggtaatcg ccctgatcca
     1141 gctcctgacc agcgtcgacc atgtgatcgt gctgacgagg ggcgggccgt ccaacgccac
     1201 caacctcctg ctctattaca tcttccagtc ggcccacgag aacttcgagt acggcaaggc
     1261 cgccgccgcg accctgatca gcgtggcgat cctgctcgcc atttcgttcg gctcgctgcg
     1321 ggtcatggaa cgcggagcgc gcggtgcagc ttaacaagca gctctccgcc gctctcctcg
     1381 cagccctcct gtcggcggtc gccttcctgt gggcgagccc gttcctgtgg accctggtcg
     1441 cttcgttccg gccagaaggc gcgggcagcg ccgacatggc ctcgctgctg cccgatctcc
     1501 atccgaccct ggagaatttc cgcaacgcgc tcgagagcgg ctcgttcggg ctctactacg
     1561 tcaacaccat catcgtcgtg gcgggcgtgc tcgccgtgca atgcgtgacg gtgagcctgg
     1621 ccggctacgc cttcgcccgc ctgcgatttc gcggccgtga cgtgctgttc tacgctttcc
     1681 tgctgcagct catgctggtg ccgccggcgc tgatcgtgcc caacctgcgc accgtggtcg
     1741 atctcggcct gtacgacacc ctgcccggtg tgatggcgcc ctatttcgct tcggccttcg
     1801 gcaccttcct gatgcgccag accttcctcg ccctgccgcg cgacttcgag gaggcggccg
     1861 ccatcgacgg cgcgccgtgg tgggcgatca tctggtacgt gctcttgccg atggccaagc
     1921 ccggcctggt cgccttcgcc atcgtgtcga tcaccgcgca ttggaacgag tttctatggc
     1981 cgctgatggt gatcagcgat cccgccaatc acacgctcac cataggactc gccgccttca
     2041 cgcgcggcgc cgagggcggc aaggaatggg gcgtgctggc ggccggcacg cttttggtca
     2101 tggcgccgct ggccgtggcg ttcatcgcct tccagcgccg cttcgtcgac agtttcgttt
     2161 tcagtggagt gaaaggctag gtcttgaaca cagagggtgt catcccgagc gtagcgaggg
     2221 acctttcgcg gcgtcgatca agggtccctc gcttcgctcg ggatgacacg gttgatgtct
     2281 tcgatatttc ctacaagggg gctttcatca tgtcgttgat cagatgtctt tccgtcggcg
     2341 ctttggcact ctccctcacc gccgcgttgc cggtttgggc gcagaccaag atcgagttct
     2401 tcttcccggt gcccgtcgag ggcaagctgg cgaaggagat gacgcggctg gtcaagctct
     2461 acaacgaggg ccagaaggag gtcgaggtca ccgccgtcta taccggcggc tatgacgaca
     2521 ccaagctcaa ggcgcaggcc gccgccaagg ccggcaagcc gccttccgtg gtattgatga
     2581 gcgccaactt caacgtcgac ctcaagctct ccggcgacat catctcgctc gagcccatgc
     2641 tcaaggccga caagaccacg cgtgaggatt ttctgagcga cttctggcgg gccctgcatg
     2701 ccaatgccgt cgtcgacggc gagctctacg gcgtgccgtt ccagaattcg acgccgctgc
     2761 tctactacaa cgtcgagcac ttcaaggagg cgggcctcga tccctccaag ccgccgcgca
     2821 cctggtccga gctcgtcgat gccgccaaga agctcaccaa gggcgatcgc cacggcttcc
     2881 tcatgccggc cggctacgac tatctcggct ggctgatgga agccctcacg atgtccaatg
     2941 gcggccgcta cttcaacgag gagtatggcg gcgaggtcta ttacgaccag ccctcgactc
     3001 tgggcgccgc ccgcttcgtc gaagacctga tcttcaagca caaggtcatg ccgcagggca
     3061 tcaccgaggc gggcggcgta tcgaccgcct tcttcgccgg caaggcctcg atggtgctgc
     3121 tgtcgaccgg ttcgctgtcc ttcatccgcg agaacatgaa gcaaccatac gatgtcgcct
     3181 tcgtgcccaa gaacgtgcgc aacgccgtgc cgatcggcgg cgcctcgctg gtcatgttcg
     3241 cgggccagag cgaggacagc aagaaggccg gctggaagtt catcaagtgg ctgaccacac
     3301 ccgagacgat cggcggctgg agccgcttca ccggctactt cgcgccgcgc aagtcggcct
     3361 acgacaagcc cgagatgaag gactttctcg ccaagaacct ggatgccacg gtggccctcg
     3421 agcagctagc cttcgccaag ccgtggttcg cgacctatca gaccgtggcg gtgcgcaagg
     3481 cgctggagga cgagatccag gccatgatga
//
LOCUS       DASWGA010000111         5770 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_643652, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000111 DASWGA010000000
VERSION     DASWGA010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5770
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_643652"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..678)
                     /locus_tag="VF991_02550"
     CDS             complement(<1..678)
                     /locus_tag="VF991_02550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012255796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEX9555345.1"
                     /translation="MADPAPVVRFAPSPTGLLHVGNVRTALFNWLFAKRHSGTFILRL
                     DDTDRARSKPEYEAAIERDLKWLGLDWALKERQSERLAHYDAARDKLIAAGRLYACYE
                     TPEELDFKRKRLLAQSRPPVYDRAALRLSDADRARLEGEGRHPHWRFKLAPEEVRWND
                     LVRGPQHIDEASQSDPVLVRADGSYLYSFTSVVDDIAFAITHVIRGEDHVTNSAAQIQ
                     IFRALDAA"
     gene            772..1488
                     /locus_tag="VF991_02555"
     CDS             772..1488
                     /locus_tag="VF991_02555"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9555346.1"
                     /translation="MRTQDIAYDADGAHMIGQYVVDDSTSTRRAGVLVCHEGPGLTEH
                     TRKIAARLAGLGYAAFAMDYHGGGKPLTDPAEMRSRIGAWMADSTGIRARATAALDVL
                     RAQKEVDPARLAAIGYCFGGTTSLELGRAGCDLKAIVGFHSGLATARPQDAKNIKGKV
                     LVNIGADDPIIPPEQRLDFEKEMKAAGIDWRLQLYGGAGHSFTNPAADSRGMKGFFYH
                     EATDRRSWNAMIELFNETLK"
     gene            1508..2482
                     /locus_tag="VF991_02560"
     CDS             1508..2482
                     /locus_tag="VF991_02560"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9555347.1"
                     /translation="MKRRHLLAASAGLLAAPGLARAQAKYPDHPIRLVIPFPPAGPTD
                     IIGRMTAERLTAMLGQNVVVDNKTGAAGSIGAVDVKNAKPDGYTFLFATSSTHAINPT
                     AFVKPPYDPIKDFTPISSICVNPLILVTHPSMPDSVTGLVDLMKKNPGKYSYASSGIG
                     SILHLAGEYFKREVGGLDVRHVPYRGSTPALQDLLAGNVAWMFETFSTSLQHHRSGKL
                     RILAYAHAQRAAIAPEIPTMIEAGVKGYEAYTFNLIVGPPGTPQPVIDTIDQASRKLM
                     ADPSVVKFLEDIAAVPTTDTTPERTAKFIKDELAKWAPVIRAADVKIE"
     gene            2634..4262
                     /locus_tag="VF991_02565"
     CDS             2634..4262
                     /locus_tag="VF991_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9555348.1"
                     /translation="MDAFNQPPPLEPYNLFATDRILCAGVDREGADWAADGLRHLGGT
                     LGTPDTVQLGFEANTNAPRLRSFDRFGNRLDEVEFHPAWHSLLGLAVSSGLHSGPWAN
                     PRKGAHVARAAGTFMLVQIESGVYCPLAMTYGSIPTLRRSAAIADEWLPRIFSTQYDK
                     SSQPASRKTSALIGMAMTERQGGSDLRTNETEAVAAGSHFALNGHKWFMSAPMCDAFL
                     VLARQADGLSCFFVPRWTPDGTRNAIHIQRLKDKLGNRSNASAEVEFAGAHAQLVGEP
                     GRGIRTIIEMSNYTRLDCTIGSAGLVRQAVVQAIHHASHRTAFQRRLADQPIMMNVLA
                     DLAVESEAATMLALRLARAYDEDSEAAHAFRRIVTPAAKFWVCKRAPFLAYESLEVLG
                     GNGYIEESVLPRIYRELPVNAIWEGASNVMCLDVCRALSQLGAAADSIVDEISEAAHA
                     DRRLNEFVSGLQRRLARAGAQDESASRALVRDVVLAVQAALLVKFSTPQVADAFCGSR
                     LGGDFGVMGTLPSGHDFRAIIERAAPTAVAGKPV"
     gene            complement(4278..5237)
                     /locus_tag="VF991_02570"
     CDS             complement(4278..5237)
                     /locus_tag="VF991_02570"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEX9555349.1"
                     /translation="MAYLAAFAGVLCFRDPGAVVACSAALGPLIALLFRIAHDAGHHS
                     HFRDRRLNSLVGHLCILPSYHPYSVWLLFHNKLHHGFTNLRSRDYIWIPLSKSEYDRL
                     TPVSRAAERLYRSAAGVGLYYGYVIWWRKMMRQPVSHLAISSGKARRDRMVVRLFLLC
                     QLGAIAAASDSLEQFVALALAAVAVPFAVFCWMVGYVSFFNHTHPRVPWFARAEDWSF
                     FGGQLSCTVHMSVPMWLVFFLTDLGLHGSHHFEPRVPIWRLPGADDTVKQAFSRQLVI
                     ERWTFRTQAKILRTCKLYDYDAHRWLDYAGVPTACVVLEKVKL"
BASE COUNT         1079 a         1853 c         1886 g          952 t
ORIGIN      
        1 cgcggcatcg agggcacgga atatctggat ttgcgccgcg ctgttggtga cgtgatcctc
       61 gccgcggatg acgtgcgtga tggcgaaggc gatgtcgtcg accaccgacg tgaagctgta
      121 gaggtagctg ccgtcggcgc gtaccagcac cgggtcgctc tggctcgcct cgtcgatgtg
      181 ctggggcccg cgcaccagat cgttccagcg cacttcctca ggcgcgagct tgaagcgcca
      241 atgcggatga cggccctcgc cttccagccg cgcccggtcg gcgtcgctca gtcggagcgc
      301 cgcccggtca tagaccggcg gccggctctg ggcgagcagc cgcttgcgct tgaagtcgag
      361 ctcctccggc gtctcgtagc aggcatagag acggccggcg gcgatcagct tgtcgcgcgc
      421 ggcgtcgtag tgcgccagcc gctcggactg ccgctccttc agcgcccagt cgaggccgag
      481 ccattttagg tcgcgctcga tcgcggcctc gtactcgggc ttgctgcgcg cgcggtcggt
      541 gtcgtcgagg cgcaggatga aggtgccgct gtgccgcttg gcgaacagcc agttgaacag
      601 cgccgtgcgc acgttgccga catgcaagag gccggtgggg ctgggcgcaa aacgaacgac
      661 gggggcggga tcggccatgc gagccgactt gtggcgacgg cccgttggcg ggtcaagcgc
      721 gctccgctac tgtcccggcc caaggcgtag gaagggatgg aggatcacca gatgcgcacc
      781 caggacatcg cctacgacgc cgacggcgcc cacatgatcg gccagtacgt cgtcgacgac
      841 agcaccagca cccgtcgcgc gggcgtgctg gtctgccatg aagggccggg cctcaccgag
      901 cacaccagga agatcgccgc gcgcctggcc ggcctgggct atgccgcctt cgccatggac
      961 tatcacggcg gcggcaagcc gctcaccgac cccgccgaga tgaggtcgcg catcggcgcg
     1021 tggatggccg attccaccgg catccgggcg cgcgcgacgg cggcgctcga cgtcctgcgg
     1081 gcgcagaagg aggtcgaccc ggcgcgactg gccgccatcg gctactgctt cggcggcacc
     1141 acgtcgctcg agctcgggcg ggccggctgc gatctcaagg cgatcgtcgg cttccattcc
     1201 ggcctcgcca ccgcccggcc gcaggatgcg aaaaacatca agggcaaagt gctggtcaac
     1261 atcggcgccg acgatccgat catcccgccc gagcagcgcc tcgatttcga aaaggagatg
     1321 aaggccgccg gcatcgactg gcgcctgcag ctttatggcg gcgccggcca cagtttcacc
     1381 aatccggcgg cggattcgcg cggcatgaag ggcttcttct accatgaggc gacggatcgc
     1441 cggtcgtgga acgccatgat cgaactattc aatgaaacgc tgaagtagag agttcagaaa
     1501 ggaacaaatg aaacgccgtc accttctcgc cgcgagcgcc ggcctgctcg cggcgcccgg
     1561 gctcgcgcgc gcccaggcca aataccccga ccatccgatc cgcctggtca tcccgtttcc
     1621 gccggccgga ccgaccgaca tcatcggccg catgacagcc gagagattaa ccgcgatgct
     1681 cggccagaac gtcgtggtcg acaacaagac cggcgccgcg ggctcgatcg gagcggtcga
     1741 cgtcaagaac gccaagcccg acggctacac gttcctgttc gcgacgtcat cgacgcatgc
     1801 catcaatccg acggccttcg tcaagccgcc ctacgatccg atcaaggatt tcacgccgat
     1861 ctcgtcgatc tgcgtcaatc cgctgatcct ggttacccac ccatcgatgc ccgattcggt
     1921 gacgggcctc gtcgatctga tgaagaagaa ccccggcaag tattcctatg cctcgtccgg
     1981 catcggcagc atccttcatc ttgccggcga gtacttcaaa cgcgaggtcg gcggcctgga
     2041 cgtgcggcac gtaccttatc ggggctccac cccggccttg caggatctgc tggccggcaa
     2101 tgtcgcctgg atgttcgaga cgttcagcac cagcctgcag catcaccggt ccggaaagct
     2161 ccgcatcctt gcctatgcgc acgcccagcg cgcggcgatc gcgccggaga tcccgaccat
     2221 gatcgaggcc ggcgtgaagg gctacgaggc ctatacgttc aacctcatcg tcgggccgcc
     2281 cggcacgccg cagccggtga tcgatacgat cgaccaggcc tcgcgcaagc tcatggccga
     2341 tcccagcgtc gtcaagttcc tggaggatat cgccgccgtg ccgaccaccg acacgacgcc
     2401 cgagcgcacc gcgaagttca tcaaggacga actcgccaaa tgggcgccgg tgatccgcgc
     2461 cgccgatgtg aagatcgagt agctgctggg ggcgcgcctc tccaggagac aggaggcgac
     2521 gtcaagtaag tcagccacgt tggacaaccg cttcggcgga gcttggcgtt ttgggattgc
     2581 cgccccatcg gccatgtgat cgcatggcgc catcaactgt gggtgcaaca cacatggacg
     2641 cattcaacca gccgccaccc ctggagccct acaacctctt cgccactgat cgcattctct
     2701 gtgcgggcgt tgaccgcgag ggcgcggatt gggcggcaga cggactgcgg cacctaggcg
     2761 gaacattggg aacacccgac acggttcagc ttggctttga agccaatacc aacgcgcctc
     2821 gcctgcgcag cttcgaccgc ttcggcaatc ggctcgatga agtggaattt cacccggcat
     2881 ggcattcgct gctgggcctc gccgtgtcat cggggttgca cagcggcccg tgggccaatc
     2941 cgcgcaaggg cgcacatgtc gcgcgagcgg ccggaacgtt tatgctcgtg cagattgaga
     3001 gcggcgtgta ctgcccgctg gccatgacct acgggtcaat accgacattg cggcgctccg
     3061 ccgcgatcgc tgacgagtgg ttgccgcgaa tcttttcgac ccagtacgac aagagtagcc
     3121 agcctgccag ccgcaagaca tccgcgctca tcggaatggc catgaccgag cggcagggcg
     3181 gatcggatct gcggaccaat gagacggagg cggtcgcggc gggctcgcat ttcgccctca
     3241 acgggcacaa gtggttcatg tcggccccga tgtgcgacgc tttcctggtt cttgccagac
     3301 aggccgacgg gctgagctgc ttcttcgtcc ctcgctggac gccggatggg acgcgcaacg
     3361 cgatccatat ccagcggctc aaagacaagc tgggtaaccg gtcgaacgct tcagccgagg
     3421 ttgaattcgc cggcgcccac gctcagttgg tcggcgagcc tggacggggc attcgcacca
     3481 tcatcgagat gagcaactac acacgcttgg actgcacgat tggctcggcc ggcctcgtca
     3541 gacaagcggt cgtgcaagcc attcatcatg ccagccatcg cacggcgttc caacggcgct
     3601 tggccgacca gccgatcatg atgaatgtgc tggccgacct cgctgtggaa agcgaggccg
     3661 ccacgatgct agccctgcgg ctggcccggg cctacgacga ggacagtgag gcggcgcatg
     3721 catttcgccg catcgttacg ccagcggcca aattctgggt ctgcaagcgg gcgccgttcc
     3781 tggcttacga gtcactcgaa gtgctggggg gcaacggcta catcgaggaa agtgttctgc
     3841 cgaggatcta ccgcgagctt ccagtcaacg ccatctggga gggcgcaagc aacgtcatgt
     3901 gcctcgacgt ttgccgtgcg ctatcgcaat tgggggcggc ggcggacagc attgtcgacg
     3961 agatctcgga agcggcccac gccgatcgcc gactgaacga gttcgtatcc gggctgcaac
     4021 ggcgacttgc tcgtgccggg gcgcaggacg aaagcgcgag tagggcgctg gtgcgcgacg
     4081 tcgtgcttgc cgttcaggcc gcgctgctcg tcaagttctc cacgccgcag gtggcggatg
     4141 cgttttgcgg ctcacgcctt ggcggcgact tcggcgtaat gggcacacta ccctcagggc
     4201 acgatttccg cgccatcata gagcgtgctg cgccgacggc agtcgccggc aagcctgtct
     4261 aggccgtggc attgccatta gagcttcacc ttctccagga cgacgcaggc ggtcggcacg
     4321 ccggcatagt cgagccagcg gtgagcgtcg tagtcgtaca acttgcaggt ccgaagaatc
     4381 ttggcctgcg ttcggaacgt ccaccgctcg atgacgagtt gtcgtgaaaa cgcttgcttc
     4441 actgtgtcat ccgcccctgg caggcgccag attggcaccc gcggctcgaa gtgatggctt
     4501 ccgtgcagtc ccagatcggt cagaaagaag accagccaca tcgggaccga catgtggacg
     4561 gtgcagctga gctggccgcc aaagaacgac cagtcctcgg cacgcgcgaa ccatggcacc
     4621 cgcggatggg tatggttgaa gaagcttaca tatccgacca tccagcaaaa aaccgcgaag
     4681 ggaaccgcga ccgcggcaag cgcaagcgcc acgaactgct cgagggaatc cgacgccgcg
     4741 gcaatagcgc caagttggca gagcagaaaa agccggacga ccatgcgatc gcgcctggct
     4801 tttcccgagg aaatggccag gtgggagacc ggctgtctca tcatctttcg ccaccaaatg
     4861 acgtagccat agtagaggcc gacacccgca gcagagcgat aaaggcgctc ggcggcacga
     4921 ctgacagggg tcagtcgatc gtattccgat ttgctcaacg gtatccaaat gtagtcgcgg
     4981 ctcctcaggt tggtgaagcc atgatgcaac ttgttgtgaa aaagcaacca gacgctgtag
     5041 gggtgatagc tgggcaggat gcaaaggtgg ccgaccagcg agttcaggcg gcggtcgcgg
     5101 aaatggctgt gatggcccgc gtcgtgggca atccggaaga gcagggcgat gagcggacca
     5161 agggcagccg agcaggcgac cactgcgccg ggatcccgga aacacaaaac gcctgcaaac
     5221 gccgccagat aggccaacgc ggcggctcca gcgaatgtcg ctgcggaaga ccatgattgc
     5281 cgacgcaggt cggcgagttc cgcacggacg atggtcggag atctgcccga tgtcaccaca
     5341 acgtcccgta gcccccaatg agtcgcgttg caacctgggg ttatacttac acaattgcta
     5401 taccttgtga agagccagct cctgaaggtc taggcgggct gtccggccgg ccgatgttgg
     5461 gtcgcggggg caagggcctc ggcgaggtcg gcaaccaccg acactacgcc cagcgcaccg
     5521 cgaagttcat cacggacgag agcgccaaat gggcgccggt gatccgcgcg gccggtggtg
     5581 aagatcgagt agtgctgggg gcgcgccact ccagtggcgc gatcttctca tgccagcgac
     5641 gtcttacttg tagcccggcg gtggcgggac gttggccggc gccggcgaga tcggcgcctg
     5701 ctggggcatc tgcgacggca gcggctcgtt gcccggcggg gcgacgatgt cgctggtcga
     5761 ggcgacgcgg
//
LOCUS       DASWGA010000112         5234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2041375, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000112 DASWGA010000000
VERSION     DASWGA010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5234
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2041375"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..782)
                     /locus_tag="VF991_02575"
     CDS             complement(<1..782)
                     /locus_tag="VF991_02575"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX9555350.1"
                     /translation="MSFARLTRILRSASFRLTLFYAVLFVASAGALFATVYWTATAAM
                     QNDMAAVLRTEAYQLAEVHGRTGLAGLAQQITRRMNFRTRGPIFYLLQAPNRRVVVGN
                     LPGMPPVEGVVDFVPQSDAPEADTEPSKLTGFGLTLPDGSFLLVAQDADRLTEMQHAI
                     VRAFVWAGGLTLLLAVAGGALIGSSFLRRIDTITRTSRAIMEGDLSARIPVRGTHDEI
                     DQLVSSLNAMLGRIQQLMDGLRQVSSDIAHDLRTPLGRLRQHL"
     gene            complement(760..1434)
                     /locus_tag="VF991_02580"
     CDS             complement(760..1434)
                     /locus_tag="VF991_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018859085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX9555351.1"
                     /translation="MKILLVEDDKQTADYIAKGLREHSHVVDHADNGRDGLYLATGEK
                     YDVMIVDRMLPAMDGLSLVKAARASNVRTPVLFLTTMGGVDDRVTGLEAGGDDYLVKP
                     FAFAELLARVGALARRPPMVAATSLAVADLEMDLLARTVTRAGRRIELLAQEFKILEY
                     LLRHAGEVVTRTMLLEKVWDFHFDPKTNIVETHISRLRSKIDKAFDKPLLHTVRGAGY
                     VIRAPD"
     gene            1594..3105
                     /locus_tag="VF991_02585"
     CDS             1594..3105
                     /locus_tag="VF991_02585"
                     /inference="COORDINATES: protein motif:HMM:TIGR02037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEX9555352.1"
                     /translation="MTKTKTILSALALTTALTAPVLIAPLFSAPAAIAAAPTVVSGVQ
                     DFSDLAAKVTPAVVNVAVTMKAGAADDDDVQMSDRSGQQQQMEEFMQRFAERFGQKGM
                     PQVKPQHPAQKAQAVGTGFIVDAAGWIVTNYHVAGKADSITVTLTDGRKLPAKLMGGD
                     EKTDLALLKVESDKPLPFVSFGDATKVRVGQPVMAVGNPFGLGGTVTTGIVSARGRDI
                     HSGPFDDYIQTDAAINRGNSGGPLFDIDGKVIGINTAIFSPTGGNIGLGFAIPSSLAE
                     PVVIQLKTSGRVERGLLGVQIQPVSSEIAQSMSLNGEKGALVADVTADSPALAAGIKS
                     GDVIKSVDGKDVDSIRDLTRMISAIKPGTSVKLGVWRDGKDMSVTAKIGDQKDEAAVV
                     KASADKQADKKAEPMSYGVSLAPLSDEMRQELKLKGSVKGAVIAAVEPGSPADEQGLK
                     AGDVLQQVGKDQIDSPKMAAEKLKEAKKTGKPVLMKIYREGMTRFVAISPRAA"
     gene            complement(3653..4765)
                     /locus_tag="VF991_02590"
     CDS             complement(3653..4765)
                     /locus_tag="VF991_02590"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9555353.1"
                     /translation="MKFAVFDHLDRSGPDLGCQYEDRLKLTELYEWAGFHAYHVAEHH
                     GTPLGSAPSPGLFLAAVAQRTKVLRFGPLAYPLGLYHPLRLIEEICMLDLMSRGRLEL
                     GVGRGASPYEAAFFGVEPATAQERFDEILEIVLKGLGADRLDHAGKFFTLKDIPMVMQ
                     PVQRPHPPLWHVTRSLDSADRLAGLGCNVALAMPTRDAGKFTARYRAAWSELERPLAD
                     MPFVGNTRNVVVLDSDRDAVSAARRAFHVWYDSMVHLWRAHGVELPRQISTPDFDEAV
                     DQGYIVAGSPSTVRERMLRDQSVSGINYSICRFACGDLSFEESARSVRLFAREVMPAL
                     VPNDDNGPVRAATGTLARGLRWIGDEDLSEVGFLFR"
     gene            complement(4854..>5234)
                     /locus_tag="VF991_02595"
     CDS             complement(4854..>5234)
                     /locus_tag="VF991_02595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555354.1"
                     /translation="WKALGRDEARLPLIGLSRHVVVGETDREAQGAAKRAFALWYDAL
                     IHLWRAHGVGLPRQLIPAEFDDALEQGYIIAGSPSTVRERMKRDNEVAGINYCICRLA
                     FGDLSFEESKHSIELFAKEVMPAL"
BASE COUNT          935 a         1696 c         1779 g          824 t
ORIGIN      
        1 agatgctggc gcagccggcc gagcggcgtg cgcaggtcgt gggcgatgtc gctcgagacc
       61 tggcgcagtc cgtccatcag ctgctggatg cggcccagca tggcgttgag gctcgacacc
      121 agctggtcga tctcgtcgtg cgtgccgcgc accggaatgc gcgccgagag gtcgccctcc
      181 atgatggcgc ggctggtgcg ggtgatggtg tcgatgcggc gcaggaagga cgacccgatc
      241 agcgccccgc cggcgacggc aagcagcagg gtgagcccgc ccgcccacac gaaggcgcgc
      301 acgatggcat gctgcatctc ggtcaggcga tcggcgtcct gggcgaccag caggaacgag
      361 ccgtcgggca gggtgaggcc aaagccggtg agcttggatg gctcggtgtc ggcttcgggc
      421 gcgtcgctct ggggcacgaa gtcgacgacg ccttcgaccg gcggcatgcc gggcaggttg
      481 ccgaccacga cgcgtcggtt gggcgcctgc aggagataga agatcggccc gcgggtgcgg
      541 aagttcatgc gccgcgtgat ctgctgggcg aggccggcaa ggcccgtgcg gccatggacc
      601 tcggcgagct ggtaggcctc ggtgcgcagc accgccgcca tgtcgttctg catcgccgcg
      661 gtggccgtcc agtagacggt ggcgaacagc gcgccggccg atgccacgaa cagcacggca
      721 tagaacagcg tcagccggaa gctggccgag cgcaggatcc tagtcaggcg cgcgaatgac
      781 atagccagcc cccctgacgg tgtgcagcag gggcttgtcg aaagccttgt cgatcttgga
      841 gcgcaggcgg ctgatgtggg tctcgacgat gttggtcttg ggatcgaaat ggaagtccca
      901 gaccttctcg agcagcatgg tgcgcgtcac cacttcgccg gcatggcgca gcaggtattc
      961 caggatcttg aattcctggg ccaaaagctc gatgcgccgg ccggcgcgcg tcacggtgcg
     1021 ggccaaaaga tccatctcga ggtcggccac ggcaagcgac gtcgccgcca ccatcggcgg
     1081 ccgccgcgcg agcgcaccga cgcgcgccaa aagctcggcg aaggcaaagg gtttcaccag
     1141 gtagtcgtcg ccgcccgcct cgaggccggt cacgcgatcg tcgacgccgc ccatggtggt
     1201 gaggaacagc accggcgtgc gcacattgga ggcgcgcgcg gccttgacca gcgacagccc
     1261 gtccatcgcc ggcagcatgc gatcgacgat catgacgtca tatttctctc cggtcgcgag
     1321 atagagcccg tcgcggccgt tgtcggcgtg gtcgacgaca tggctgtgct cacgcaggcc
     1381 cttggcgatg tagtcggcgg tttgcttgtc gtcttcgacg aggaggattt tcactttagc
     1441 cctgacagcg cgtgcggcat cggcgtttgc ctcgattccc ggccaaacgc aacgttcccc
     1501 aactatacaa acattcaatg aagcggccat ccggtcgcca tgggccaagt cccatatttc
     1561 cttcgccaaa gccccccgaa ggaggttgtt tttatgacga agaccaagac cattctctcc
     1621 gccctggcgc tgacgacggc gctgacagcg ccggtgctga tcgccccgct gttctccgcg
     1681 ccggcggcga tcgccgccgc tccgaccgtt gtgtcgggcg tgcaggactt ctccgacctt
     1741 gccgccaagg tgaccccggc ggtcgtcaat gtcgccgtga ccatgaaggc cggcgcggcc
     1801 gacgacgacg acgtccagat gtccgaccgc tccggccagc agcagcagat ggaagagttc
     1861 atgcagcgct tcgccgaacg cttcggccag aagggcatgc cccaggtgaa gccgcagcat
     1921 ccggcgcaga aggcgcaggc cgtcggcacc ggcttcatcg tcgacgccgc tggctggatc
     1981 gtcaccaact accatgtcgc cggcaaggcc gactcgatca ccgtcaccct gaccgacggc
     2041 cgcaagctgc cggccaagct gatgggcggc gacgagaaga ccgacctcgc cctgctcaag
     2101 gtcgagagcg acaagccgct gccgttcgtg agcttcggcg acgccaccaa ggtgcgcgtc
     2161 ggccagccgg tgatggcggt cggcaacccg ttcggcctgg gcggcaccgt gacgaccggc
     2221 atcgtgtcgg cgcgcggccg cgacatccac tccggtccgt tcgacgacta catccagacc
     2281 gacgccgcca tcaaccgcgg caactcgggc ggtccgctgt tcgacatcga cggcaaggtg
     2341 atcggcatca acaccgccat cttctcgccg accggcggca acatcggcct cggcttcgcc
     2401 attccctcga gcctggccga gccggtggtg atccagctca agaccagcgg ccgggtcgag
     2461 cgtggtctcc tgggcgtgca gatccagccg gtcagcagcg agatcgccca gagcatgtcg
     2521 ctcaacggcg agaagggcgc gctggtggcc gacgtgacgg cggacagccc ggctctggcc
     2581 gccggcatca agtcgggtga cgtgatcaag agtgtcgacg gcaaggacgt cgacagcatc
     2641 cgcgacctca cccgcatgat ctcggcgatc aagcccggca cctcggtcaa gctcggtgtg
     2701 tggcgcgacg gcaaggacat gagcgtcacc gccaagatcg gcgaccagaa ggacgaagcc
     2761 gccgtggtca aggccagcgc cgacaagcag gccgacaaga aagccgagcc gatgtcctac
     2821 ggcgtgtcgc tggcgccgct ctccgacgag atgcgccagg agctgaagct caagggctcg
     2881 gtcaaaggcg cggtgatcgc cgcggtcgag ccgggcagcc cggccgacga acagggcctg
     2941 aaagcgggcg acgtcctgca gcaggtcggc aaggaccaga tcgacagccc caagatggct
     3001 gccgagaagc tcaaggaagc caagaagacc ggcaagccgg tcctgatgaa gatctatcgg
     3061 gaggggatga ccagattcgt cgctatctct ccccgggcgg cgtagctgat cctctcgacg
     3121 agccggcggt ggccccacca ccgccggctt tgtcttacca gccccctcaa tttggcaatc
     3181 gtcttcgaca ggggggcgcg tcacgccaag cgggcttaac cgcgaagggc gcgttcaggg
     3241 ggcgggaggt ccgcggtcca cgcgtaagtg gggccgcggg cctcttcttt ttggcgaggt
     3301 cgcacaagtc ttctgcctcc ctcgtcatac gggggaggtg ccccgtcata cggggcggag
     3361 ggggaaagcc tcacagacaa tctttgaaag tttcggatct gaaatcggca gttatctcgc
     3421 tcgcggcctt ccccctccgg ccctgcgggc cacctctccc gtacgacggt agggctatcg
     3481 catttgacaa tttagcccgt catcccgagc gaagccgagg gacctcttct tgtcggcagg
     3541 acaacagaac aggtccctcc gctgcgcctc gctgcgctcg gctccggtcg ggatgacggg
     3601 agttttggtc aaatgcgatg gcccctgcgt acgacggggg aggtgattga tgtcaacgaa
     3661 acagaaaccc gacttccgac agatcctcgt cgccgatcca gcgcaggccg cgggccaggg
     3721 tgccggtggc ggcgcggacg gggccgttgt cgtcgttcgg cacgagcgcc ggcatcactt
     3781 cacgcgcgaa caggcggacc gaccgcgccg attcctcgaa cgaaagatcg ccgcaggcga
     3841 agcggcagat gctgtagttg atgcccgaga cggactgatc gcgcaacatg cgctcgcgca
     3901 ccgtggaagg ggagccggcg acgatgtagc cctgatcgac cgcttcgtcg aagtcgggcg
     3961 tcgagatctg gcgcggcagc tcgacgccgt gggctcgcca gagatggacc atggaatcgt
     4021 accagacgtg gaaggcacgg cgggcggccg agaccgcgtc gcggtcactg tctaaaacca
     4081 ccacgttgcg cgtgttgccg acgaacggca tgtccgcaag cgggcgctcg agctccgacc
     4141 aggcggcccg gtagcgcgcg gtgaacttgc cggcgtcacg cgtcggcatg gcgagcgcta
     4201 cgttgcagcc tagcccggcc aggcgatcgg cgctgtcgag cgagcgggtg acgtgccaca
     4261 gcggcgggtg cgggcgctgc accggctgca tcaccatagg gatgtccttc aaggtgaaga
     4321 acttgccggc atggtcgagg cggtcggcgc ccagtccctt gagcacgatc tccagtattt
     4381 cgtcgaagcg ctcctgggcg gtggcgggtt cgacgccgaa gaacgccgcc tcgtagggcg
     4441 aggcgccgcg gccgacaccg agctcgagcc ggccacggct catgaggtcg agcatgcaga
     4501 tctcttcgat caaccgcagc ggatgataaa gaccgagcgg ataggcgagc ggtccgaagc
     4561 gaagcacctt cgtgcgctgg gcgacggcgg cgaggaacag gccaggcgag ggcgccgacc
     4621 ccagcggtgt gccgtggtgt tcggccacgt gataggcatg gaagcccgcc cattcataga
     4681 gctcggtcag cttcaggcgg tcttcatatt ggcaacccag gtcggggccg gacctgtcga
     4741 gatgatcgaa gacggcgaac ttcatatttt tctttttacg acggtgattt gccgtctcat
     4801 tttgcatgca acgctgaaca aagtcgctgc ctcggcgtgc atagctcgaa gagtcaaagg
     4861 gcgggcatca cttctttggc gaacagctcg atcgagtgct tcgactcctc gaacgacaga
     4921 tcgccgaagg ccagccggca gatgcagtag ttgatgccgg ccacctcgtt gtcgcgcttc
     4981 atgcgctcgc gcaccgtcga gggcgagccc gcgatgatgt agccctgctc cagggcgtca
     5041 tcaaattcgg cggggatcaa ctggcgcggc aggccgacgc catgcgcccg ccagagatgg
     5101 atcaacgcgt cgtaccacag cgcgaaggcg cgcttggcgg cgccctgcgc ctcgcggtcg
     5161 gtctcgccga ccacgacatg gcggctgagc ccgatcaacg gcagccgcgc ctcgtcgcgg
     5221 cccagcgcct tcca
//
LOCUS       DASWGA010000113        22856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1785685, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000113 DASWGA010000000
VERSION     DASWGA010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 22856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22856
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1785685"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="VF991_02600"
     CDS             <1..441
                     /locus_tag="VF991_02600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555355.1"
                     /translation="NLAPVAKTLLERGGFKVDLQSMDWQTVVNRRARKDPVSKGGWNI
                     SMTAAAVTLLIDPINNHYAEASGDRAQFGWPLDEEIEKLRSQFVRESDPKKQLEIAEK
                     VQTRIISEGVTIPLGQFVQPMARRKNVSGNVPSPVTVFWNVEKK"
     gene            569..1576
                     /locus_tag="VF991_02605"
     CDS             569..1576
                     /locus_tag="VF991_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9555356.1"
                     /translation="MSRTSTRRIVLSASVLSVALLMAGQATAQNRQFSFAYDQPNTTA
                     YGVAANIFDAKLKELSGGKFSINQFPGAQLGQEPQMLQKMRAGDIDFVITSTANASTL
                     APEAGVFSLHFIFRDQGHLTRVIADPAVSKAFRAMITDKVQGAQVLGLMTMGMRNMYS
                     KKEIKSVDDIKGQKVRVQATKTEDTHFPAYGAQTVHMPFGEVYTSLQTGVVNIAENGV
                     NVYLANKHYEVAPILSMTEHEANNNCIWVSQKTWDSLSDEQKKWVQAAADEVSKVEPA
                     KALQLEKDSAEKLKKMGVKVVDNVDKTGFAKDAAPIQDQLAKELGPHAVKILELVRNV
                     K"
     gene            1611..2159
                     /locus_tag="VF991_02610"
     CDS             1611..2159
                     /locus_tag="VF991_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX9555357.1"
                     /translation="MSNRFLVLQRHRHLKWKALDPLEAALMVLCGVSIIGFTGAVFLD
                     VVTREIGAPWLWLQQVTTGFFAWGIFIGMAAAVRRNDHLYLVEITKRLTGPKRTFMES
                     FNRLVVLGVALAMVWFGYKNAILDLGSFRMPSLIPLTYYTASVPLSGILIALFAIEQL
                     INGWKRGFEGPEDTADFARFVE"
     gene            2156..3496
                     /locus_tag="VF991_02615"
     CDS             2156..3496
                     /locus_tag="VF991_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX9555358.1"
                     /translation="MSNGAILFLMAFLFLGLGYMGVPVAFALMAGVIIATSFTQISLQ
                     SMVGQMFHGIDSETLLAVPFFLLVGELMTSANVTHRMVRLAQTMVGHLRGGLAQVVTL
                     FSMFFAGISGSSTADVAVLSRTVAPEMDREGYDRAFTAALIACASTMANLIPPSIMAV
                     VYGATGNVSIGGLFLGGIVPGVMIGIGLMIYSHFFGPVGVKKRMATLGEFGQALKGSS
                     LPLMIPVIIMGGILTGWFTPTEAGMIASVYILVVLIPALNRGHLRFLVWDFVYTGMLY
                     AIPLAAVAGASAFGWMLGYLRGPDIVATWIADFAGTDAGMIMLLLVVLFVIIGDFVDA
                     IPAIIIFMPIINKLTELGNINPVHMGVVIITTLVFGLITPPYGLSLLVASKFVGVSFA
                     RAMYASLPIYVVFFVTIAFTVLFPDVVLYLPKLLLPESVGCFKNPSGVGYICPT"
     gene            complement(3629..4507)
                     /locus_tag="VF991_02620"
     CDS             complement(3629..4507)
                     /locus_tag="VF991_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEX9555359.1"
                     /translation="MADPIELLIQGRAHDLGGGFAVRRVLPSVKRRMVGPFIFLDHFG
                     PMDVPPGGGMEVRPHPHIGLATVTYLFEGGIFHRDSLGYTQAIRPGDVNWMTAGSGIA
                     HSERTEPEMRATGFRMHGVQTWVALPKSHEETAPAFEHVAVAKLPAWRDGGAALRLIV
                     GTYGGLTAPTTHFSPTFYVGVELPAGAKTAVSPEHAERAVYVAHGNLAIGDRVLGVGD
                     LAVLRAAQPAEIVAGAGGAKAMLLGGAPMDGPRHIWWNFVSSTKERIEQAKADWREGR
                     FAKVPGDPVFIPLPDK"
     gene            4546..6000
                     /locus_tag="VF991_02625"
     CDS             4546..6000
                     /locus_tag="VF991_02625"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEX9555360.1"
                     /translation="MSVHDLSPFFAPRSIAVVGAGERATSSGGAVMQLLRQAGYRGRV
                     VPVNPKGGTIFGYESVTSIADIDPPVDLAVIVIRPDAILDAMRECADRGIRNLLILPG
                     GFAEAGPLGVARNEALVKLAAERGLTVAGPNCAGIIHLDPAWRFAATFLRDLPPGSAA
                     GAGNGLAFISQSGALAEEFIDKANSRTLPLTSVVSVGNAVHLGVEDYLAWLGERPEIG
                     AALLYVESIDDHERFRTLARAVAARKPVIALFGGRTAIGAQAATAHTGAVANDDAAID
                     AFSASCGIVRVESLRRLLVAAKAFGRFPQGLGKRVLILSNSGGPGVLCADRASLEGLE
                     LDALPKAMVEVLRQRLPPEASVANPIDLLADAREDRFALAFEAAMTHAADAYDMVLMI
                     HVVPFMVDAGPVVGRLAELAARAKLPLLHSMMGTLPEKAEWFATMECAGVPMFNDVEE
                     MAEAAGLLARYPMLRDSARKSRPLPATFRDRRHR"
     gene            6323..7609
                     /locus_tag="VF991_02630"
     CDS             6323..7609
                     /locus_tag="VF991_02630"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX9555361.1"
                     /translation="MAQVKAPSKNQLNPAAKAASSEDVQPFSIGTDGSVATQLMTLKI
                     DPADAQAAADAVAKALGQLDHKTTSSGRAILESQGAGQPKRLVTLQLYSAKSLAVELH
                     RGADGSYGYKLAPGATEQDDERVSSLPSATSTAGPGARSLVTGSVGIVKASSSTLAAN
                     LAPIGASAATLKELTQALAGFAPAAAKIEVLKGRTVDGAPRILAASVGEGQGKHSFWW
                     FAPPSQPEGWFDDQGRRLGGTALAEPKPDSRISSPFGTRRYYGRSTGGGFHNGIDYEG
                     KIGEPIYAAADGVINHQGWYFNYGRTVKISHADNFETLYAHMSRFADGFGPGSKVRKG
                     DLIGYVGSSGRSTGAHLHFSVIVHGQFVDPAPYVSEKGGNSVLVGESLVVFRQWQQDV
                     RKAASGAESGDKRFRFLQGAEPWTHNPFQQPSLDRL"
     gene            7739..8764
                     /locus_tag="VF991_02635"
     CDS             7739..8764
                     /locus_tag="VF991_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006728483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9555362.1"
                     /translation="MFNKYVAAGVAAAALVGAAGTAQAGKDLDAVKARGQLICGVSTG
                     VAGFAVADGQGKWTGLDVDTCRAVAAALFGDSEKVKFVPTTAQQRFTALQSGEVDMLA
                     RTTTWTLTRDTALGFDFTGINYYDGQGFMVNKKLGVKSAKELNGATVCVQPGTTTELN
                     LADYFRANKMTFKPVVIEKVEEVRAAFFSGRCDVFTTDASGLYSTRAANAPNPDDYII
                     LPEIISKEPLGPVVRHGDNQFADIVRWALFAQLEAEEYGITSKNVDEMLKSDNPSIKR
                     ILGVTPGMGKALGVDEKWVYNIVKQVGNYGEMFDRNVGAGSPLKIARGQNALWTQGGL
                     QYAPPIR"
     gene            9057..10025
                     /locus_tag="VF991_02640"
     CDS             9057..10025
                     /locus_tag="VF991_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018066333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9555363.1"
                     /translation="MAGKDLDAVKARGALICGVPTGTAGFALADSQGKWVGLDVDVCR
                     AVAAAIFGDADKVKYQALTAQQRFTALQSGEVDILSNNTTITLTRDTALGLDFTAVTY
                     YDGQGFMVNKKLGVKSAKELNGATVCVAPGTTTELNLADYFRATKMSFKPVVIEKVDD
                     IRAAFFSGRCDVYTTDASGLYATRAANVPAPAKIEDFIILPEIISKEPLAPAVRHGDN
                     QFADIVRWTQYAMVEAEEYGINSKNVDEMLKSDNPTIKRILGVTPGMGKALGVDEKWV
                     YNIVKQVGNYGESFDRNVGAGSPLKIERGLNKLWTQGGLQYAPPIR"
     gene            10140..11327
                     /locus_tag="VF991_02645"
     CDS             10140..11327
                     /locus_tag="VF991_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX9555364.1"
                     /translation="MAVEALGSAPRAKVAPWNDPVIRGWVFQVVVVGLVGLLAWYLVS
                     NTVENLARQKIASGFHYLEREAGFEIGDTMISYSPASTYARAIFVGLLNTLKVSVLGI
                     VMATILGTLLGVGRLSHNWLLAKICEWYVEAFRNVPLLLWLFLFYKLISEAFPGPRQA
                     ISVLSSFYLSNRGLYFPVPLADPIHIWMGLALLVGIAGAVVLHRWARKRQDATGQPFP
                     SISAGFGLALGLPLLVWLLGGAPHHLSWPELKGFNFEGGTVIQPEFTALLLGLVLYTS
                     AFVAEIVRSGILALHKGQSEAAAALGLSRGQVMRLVLLPQALRVIVPPMTSQYLNITK
                     NSSLAIAIGYPDLVASLNVTINQTGQAIENVLLIMAAYLSVSLSISAFMNWYNKRIAL
                     RER"
     gene            11331..12611
                     /locus_tag="VF991_02650"
     CDS             11331..12611
                     /locus_tag="VF991_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX9555365.1"
                     /translation="MTDVLPVGERRQLAPPIDETGPFGWARKRLFSSWANGITTVVLL
                     VAIGWILSWFIDWAVLTANFTASTGSECRGGGACWALIREKFRLIFFGTFPYEQQWRP
                     LFAVVAMLAMLIFSADRRMWNWRLLVIWGVGSFITFLLMFGQLHIPLSLFLFVALVVG
                     GIGLAMRKAIAAPGEMNAYRVLAAIGAIGLVLRLVGVLPAWSLPIAPFSYVETSLWGG
                     IPVTLILATYGLVFAFPYGILLALGRRSQLPLIKGLCVGFIELIRGVPLISLLIMASV
                     MLPLFLPSGVTIDKFLRAQVAVILFAGAYIAEIIRGGLQSLPKGQFEAADAMGLNYVQ
                     KTLLIILPQALRVVIPPLINTFIGFFKDTSLVLIIGIFDFLNTANQALVDPNWAGFPG
                     EVYLFAAFVYFCFCYSMSRYSKYLEVELNKGTRR"
     gene            12634..13401
                     /locus_tag="VF991_02655"
     CDS             12634..13401
                     /locus_tag="VF991_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019565632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEX9555366.1"
                     /translation="MAATAHDLSNAPSVITLTGVNKWFGQFHVLSDINLDVKEGEKIV
                     ICGPSGSGKSTLIRCINRLEEHQAGDIVVDGVTLSNDVKNIEAIRREVGMVFQSFNLF
                     PHLTILENLTLAPIWVKKMPKREAEEIAMSLLKRVRIPEQALKYPGQLSGGQQQRVAI
                     ARALCMRPKIMLFDEPTSALDPEMVKEVLDVMVELAREGMTMLCVTHEMGFARAVADR
                     VIFMDMGEIVEQNEPEEFFANPRNERTKLFLGQILHH"
     gene            13532..14587
                     /gene="rfbB"
                     /locus_tag="VF991_02660"
     CDS             13532..14587
                     /gene="rfbB"
                     /locus_tag="VF991_02660"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEX9555367.1"
                     /translation="MKILVTGGAGFIGSAVVRHIIRDTDWTVANVDKLTYAGNLESLA
                     EARDSNRHTHFKVDIRDREAMDDIFRGFEPDAVLHLAAESHVDRSIDGAAPFIETNVG
                     GTYTLLEAALAYWRTLDENARTRFRFQHISTDEVFGSLGPTGKFSETTPYQPNSPYAA
                     SKAASDHLVRAWHHTYGLPTLATNCSNNYGPYHFPEKLIPLTIIRALRGERLPVYGKG
                     ENVRDWLHVEDHAAALTLVLRQGRPGETYNVGGDSEQRNIDVVHAICGLLDEMLPNTM
                     NRPHAKLIEFVTDRPGHDARYAIDASKIQSELGWRPRHDFEDGLRQTVRWYLDNRGWW
                     ERVMSGAYRGERLGLKS"
     gene            complement(14837..15739)
                     /locus_tag="VF991_02665"
     CDS             complement(14837..15739)
                     /locus_tag="VF991_02665"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018896569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9555368.1"
                     /translation="MSEQLNIEPLTQGEIDQRVFELYDEYCHGRIDRRAFLQQAAAVT
                     IGGLAMAQALLPHYARAQTISFTDQRIKARYVTYPSPGGTSGTMRGYLVQPNGPGPFA
                     TVLVIHENRGLNPYIEDVARRAAVEGFLALAPDGLSPVGGYPGNDDDGRTLQAGLDQA
                     KLRTDMLNSARYLKSHALSSGKLGVTGFCWGGGTTNFLAVTLGGDMQAGVPFYGAAPE
                     TAAVSAIKAPLLIQYAESDERINALWPAFEGALKANAVPYEMYIYPGTQHGFHNNSTP
                     RYHEASAKLAWERTMAFFKKQLVA"
     gene            complement(15820..16257)
                     /locus_tag="VF991_02670"
     CDS             complement(15820..16257)
                     /locus_tag="VF991_02670"
                     /inference="COORDINATES: protein motif:HMM:NF027249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEX9555369.1"
                     /translation="MRYPILVEEGTGTSAFGVVVPDLPGCFSAGDTLDEAVDAAKEAA
                     AAWIEAALDQGMSVPPPSTLESVRQLRGCKGWAVGLIDLEESFFDDTVERVNITLPRR
                     ILRRLDDMARTTGQSRSGLIARLTVAPSKTADKPQTRRRVGRS"
     gene            16508..16780
                     /locus_tag="VF991_02675"
     CDS             16508..16780
                     /locus_tag="VF991_02675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555370.1"
                     /translation="MRSVVYIVAAAALAGAVAGCADPYYPRYGYSQGYYYPSSTRYYQ
                     QPAYAYTYPTYTYQTAYAYPPGYGYRSTGDYYRNYNGIHPGPEYYP"
     gene            complement(16803..17906)
                     /locus_tag="VF991_02680"
     CDS             complement(16803..17906)
                     /locus_tag="VF991_02680"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX9555371.1"
                     /translation="MIPFLDLKAIYAELKPELDAAYTRVMESGWFVLGKEVEAFEAEY
                     AAFCGTKHCVGLGNGLEALELVLRAWDLGAGDEVIVPSNTYIATWLAVSAVGAKVVPV
                     EPTSAGPNIDPERIAAAITPRTRAIMPVHLYGEPADMDAIMALAQKHGLKVVEDVAQA
                     QGAKVRGRRTGSLGDAGAHSFFPTKNFGAFGDGGAVTTDDGRLAERLRALRNYGSRVK
                     YVNLERGLNSRLDELQAAFLRAKLPRLDAWNEHRRMVAARYDDRLSGIAGLDLPRAPQ
                     WAEPIWHLYVVRTERRAALMAALDRAGIGSLIHYPIPPHLQQAYADLGLAKGSFPLAE
                     KLADTVLSLPMGAHLKPEAVDEVAAVVQATLGG"
     gene            complement(17903..18331)
                     /locus_tag="VF991_02685"
     CDS             complement(17903..18331)
                     /locus_tag="VF991_02685"
                     /inference="COORDINATES: protein motif:HMM:NF017345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FdtA/QdtA family cupin domain-containing
                     protein"
                     /protein_id="HEX9555372.1"
                     /translation="MTDPVLKTRNCRWIAVPGASDARGHVNFLELGKGLDFAPRRLFW
                     LHHIAPGQWRGRHGHRQTELVFVAAHGGCRVHLDDGKCQETVRLDDPARALQVGTWVW
                     HELTDFAPQSVIVVIASTLYDEAEYLRDYEVFKREAAGRP"
     gene            complement(18380..18538)
                     /locus_tag="VF991_02690"
     CDS             complement(18380..18538)
                     /locus_tag="VF991_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555373.1"
                     /translation="MDFIEQWFGLSPDGGDGSLEVLWIVAMVVAVMAIVFRRQIAVRL
                     ASWRAGRR"
     gene            complement(18561..19490)
                     /locus_tag="VF991_02695"
     CDS             complement(18561..19490)
                     /locus_tag="VF991_02695"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9555374.1"
                     /translation="MGDRGHLLGAFAAMVFVGASWGANLPVTKVMLSHFDLMPMAALR
                     TVAATASLALLLWMIEGRRALRMDIDVGRFLLLGLMMASFFAFYALGLQYSNPITAAA
                     VQVAGPLVAATTVRLSTGQRFDPGFGVALALTVLGGLILSSSSLFGAGRLTFGGGEIV
                     VLLSNVLWTLYSIKAQAWFDRASQLHRAYVASLSAMGWLILWSLGLVAVGWARSPFGV
                     SDPWIWTQLITVAILASGAGSYAWNIGASRLGVAVASLWVNLVPFCAVLWSMAYGFMP
                     NLYQITGGLVALSGVVYMQWRKLRILERERLPT"
     gene            complement(19490..19837)
                     /locus_tag="VF991_02700"
     CDS             complement(19490..19837)
                     /locus_tag="VF991_02700"
                     /inference="COORDINATES: protein motif:HMM:NF014233.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEX9555375.1"
                     /translation="MNRIFIRDFRLQVSIGIHDFERKGPQTVVVNADLLLAPAEKAHG
                     DRIANVLNYDVVHDGIVALAKSRHFNLQEALVDAILDLLLAQPGVIEARVSTEKPDVY
                     GDCRVGYEAVRRR"
     gene            complement(19839..20597)
                     /locus_tag="VF991_02705"
     CDS             complement(19839..20597)
                     /locus_tag="VF991_02705"
                     /inference="COORDINATES: protein motif:HMM:NF006597.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555376.1"
                     /translation="MKGALVTGAGMRVGRALAMALAADGFFLFVHYNRSAAAARRTVA
                     DIVAGGGKAKAVRADLSSARQAEALMGKCRARGVQLVCLVNSASLFKLDRAPTATAAD
                     FDLHMAINLRAPLLLSQALARQLPKGETGLIVNLLDQKLYNLNPDFLTYTLSKVGLQG
                     LTTLLAQAFAPQLRVAGIAPGLTLRSGNQTDIGFKRQHRENLLGVGVTTDDLVRALRF
                     IVATPSFTGDTLIVDSGEHLIGRARDIAFDNKKK"
     gene            20652..21773
                     /locus_tag="VF991_02710"
     CDS             20652..21773
                     /locus_tag="VF991_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9555377.1"
                     /translation="MSSSPFESVDCVVIGAGVVGLAVARALALAGREVIVVEAAEGIG
                     TETSSRNSEVIHAGIYYPKGSLMARTCVAGRRLLYAYCAEHGVPHRNCGKLIVATNQA
                     ESEKLAEIKGRAEANGVEGMRLLSATEAMAMEPNLLCTAALLSPSTGIVDSHSYMLAL
                     QGDAESRGAMFAFHSPVKQGRAVDGGIEIDIGGAEPMNLRCRLVVNSAGLHAPALARN
                     IAGMPADRVPTAYYAKGNYFTLAGRSPFSRLIYPVPVPGGLGVHITVDLGGQAKFGPD
                     VEWIEGINYTVDPHRADKFYAAVRRYWPALKDGALQPGYAGIRPKIVPPGAPAQDFIV
                     QGPAEHAVPGLINLFGIESPGLTSSLALAEQVRAMAGNA"
     gene            21872..22846
                     /locus_tag="VF991_02715"
     CDS             21872..22846
                     /locus_tag="VF991_02715"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX9555378.1"
                     /translation="MIKTRFTEMFGVKHPIVQGGMQWVGRAELTSAVANAGALGFLTG
                     LTQPTPEDLRKEVKRCREMTDQPFGVNLTILPTLVPRPYGEYIDAIIESGVKIVETAG
                     NNPKPFLPKFKDAGIKVIHKCTSVRHGISAEKVGVDAISMDGFECAGHPGEDDVPNLV
                     LLPAAANIIKIPMIASGGFGDARGLVAALALGCEGINMGTRFMATQEAPIHDNVKKAL
                     VESDERSTSLILRTMRNTSRVYGNSIAKKAIEMEHDGKTIQEIGPIVAGAKGRVVYET
                     GDMEHGIWSAGTVMGLIQDVPTCRELVERIVREAEDMIRGRLSQAIAA"
BASE COUNT         3947 a         7791 c         7290 g         3828 t
ORIGIN      
        1 aacctcgcgc ccgtcgccaa gacgctgctc gagcgcggcg gcttcaaggt cgacctgcag
       61 tcgatggact ggcagacggt ggtcaaccgc cgtgcgcgca aggatcctgt cagcaagggc
      121 ggctggaaca tctcgatgac cgccgccgcc gtcaccctgc tgatcgatcc gatcaacaac
      181 cactatgccg aggcgagcgg cgaccgcgcc cagttcggct ggccgctcga cgaggagatc
      241 gagaagctgc gcagccagtt cgtgcgcgaa agcgacccca agaagcagct cgagatcgcc
      301 gagaaggtcc agacgcgcat catcagcgag ggcgtcacca tcccgctcgg ccagttcgtg
      361 cagccgatgg cgcggcgaaa aaacgtgagc ggcaacgtgc cctcgccggt cacggtgttc
      421 tggaacgtcg agaagaaata accgcttcgt ggggagttgt cggacaacct tgcaaatgcc
      481 aatctggcct acgaaatagc gacgccgcct ttcggggccg gcccgcgcca cggtcgacca
      541 cgaccgggtc aatcgaaggg agaaaatcat gtccaggacg tctacgcgcc gtatcgtgct
      601 gtctgcgtca gtgctttccg ttgccctgct gatggccggg caggcgacgg cgcagaaccg
      661 ccagttcagc ttcgcctacg accagccgaa caccaccgcc tatggcgtcg ccgccaacat
      721 cttcgacgcc aagctcaagg agctgagcgg cggcaagttc agcatcaacc agttccccgg
      781 cgcccagctc ggccaggagc cgcagatgct gcagaagatg cgggcgggcg acatcgattt
      841 cgtcatcacc tcgacggcca acgcctccac gctcgccccg gaagccggcg tgttctcgct
      901 gcatttcatt ttccgcgacc agggccatct cacgcgcgtg atcgccgatc cggcggtctc
      961 gaaggccttc cgcgccatga tcaccgacaa ggtccagggc gcgcaggtgc tgggcttgat
     1021 gaccatgggc atgcgcaaca tgtattccaa gaaggagatc aagtcggtcg acgacatcaa
     1081 gggccagaag gtccgcgtcc aggcaaccaa gaccgaggac acgcacttcc cagcctacgg
     1141 agcgcagacc gtgcacatgc cgttcggcga ggtctacacc tcgctgcaga ccggcgtggt
     1201 caacatcgcc gagaacggag tcaacgtcta cctcgccaat aagcactacg aagtggcgcc
     1261 gatcctgtcg atgaccgagc acgaggccaa caataactgc atctgggtga gccagaagac
     1321 atgggacagc ctgagcgacg agcagaagaa gtgggtgcag gcggcagccg acgaggtctc
     1381 caaggtcgag cccgctaagg cgttgcagct cgagaaggat tcggccgaga agctgaagaa
     1441 gatgggcgtc aaggtcgtcg acaatgtcga caagacgggc ttcgccaagg atgccgcgcc
     1501 gatccaggac cagctcgcca aggagctcgg accgcacgcc gtcaagatcc tcgagctcgt
     1561 ccgcaacgtg aagtgaattg gccgatccct ccggccggac cagcgtcgtc gtgagtaacc
     1621 gcttccttgt cctccagcgc caccgtcatc tcaaatggaa agcgctggac ccgctggaag
     1681 cggcgctcat ggtgctgtgc ggcgtgtcga tcatcggctt caccggcgcg gtgttcctcg
     1741 acgtggtgac gcgcgagatc ggcgcaccgt ggctgtggct gcagcaggtg acgaccggct
     1801 tcttcgcctg gggcatcttc atcggcatgg cggccgccgt ccggcgcaac gaccatctct
     1861 acctggtcga gatcaccaag cgcctgaccg gtcccaagcg caccttcatg gaaagcttca
     1921 accgcctggt cgtgctcggc gtggcgctgg ccatggtctg gttcggctac aagaacgcga
     1981 tcctcgatct cggcagcttc cgcatgccgt cactgatccc cctcacctac tatacggcga
     2041 gcgtgccgct ctcgggcatt ctgatcgcac tattcgcgat cgaacagctg atcaacggct
     2101 ggaagcgcgg cttcgagggg ccggaagaca ccgccgactt cgccaggttc gtcgaatgag
     2161 caacggcgcc attctgttcc tgatggcctt cctgttcctc gggctgggct acatgggcgt
     2221 gccggtggcg ttcgcgctga tggccggcgt gatcatcgcc acctccttca cccagatcag
     2281 cctgcagtcg atggtgggac agatgttcca cggcatcgat tcggaaacgc tgctggcggt
     2341 gccgttcttc ctgctggtcg gcgagctgat gacctcggcc aacgtcaccc accgcatggt
     2401 gcggctggcc cagaccatgg tcggccacct acgcggcggg ctggcccagg tcgtcacgct
     2461 gttcagcatg ttcttcgccg gcatctcggg ctcctcgacc gccgacgtcg ccgtcctgag
     2521 ccgcaccgtg gcgccggaga tggaccgcga gggctacgac cgcgccttca cggcggccct
     2581 gatcgcctgc gcctcgacca tggccaacct gatcccgccc agcatcatgg cggtggtcta
     2641 cggcgccacc ggcaatgtct cgatcggcgg cctcttcctg ggcggcatcg tccccggcgt
     2701 gatgatcggc atcgggttga tgatctactc gcacttcttc gggccagtcg gcgtcaagaa
     2761 gaggatggcg acgctcggcg agttcggcca ggcgctcaaa ggctcgtcgc tgccgctgat
     2821 gatcccggtg atcatcatgg gcggcatcct gaccggatgg ttcacgccga cggaagccgg
     2881 catgatcgcc tcggtctaca tcctggtggt gctgatcccg gcgctgaatc gcggccatct
     2941 acgcttcctg gtgtgggatt tcgtctatac cggcatgctc tacgccatcc cgctcgccgc
     3001 cgtggccggc gcctcggcct tcggctggat gctgggctat ctgcgcggtc ccgacatcgt
     3061 cgcgacctgg atcgccgatt tcgccggcac cgacgccggc atgatcatgc tgctgctggt
     3121 cgtgctgttc gtgatcatcg gcgacttcgt cgatgcgatc cccgccatca tcatcttcat
     3181 gccgatcatc aacaagctga ccgagttggg gaacatcaat ccggtgcaca tgggcgtggt
     3241 catcatcacc acgctggtgt tcggcctgat cacgccgccc tacggcttgt cgctgctggt
     3301 ggcgtcgaaa ttcgtcggcg tcagttttgc gcgggcgatg tacgcctcgc tgccgatcta
     3361 tgtcgtgttc ttcgtcacca tcgccttcac agtgctgttt cccgacgtgg tgctctacct
     3421 cccgaagctg ctgctgccgg agtcggttgg ctgcttcaag aaccccagcg gcgtcggcta
     3481 tatctgcccg acgtgatctg gccctcccta gcgaagctgg ggaggtggcg ccgttataca
     3541 gcgacggagg ggtcatgagt ctttcagcaa cgaccatgac ccctccgtcc gctgcgcgga
     3601 cacctcccca acttcgttgg ggaggaggtc atttgtccgg caacgggatg aacaccggat
     3661 cgcccggcac tttggcgaag cggccctcgc gccagtcggc cttcgcctgc tcgatccgct
     3721 ccttggtcga cgacacgaag ttccaccaga tatgacgcgg tccgtccatt ggcgcgccgc
     3781 ccagcagcat ggccttggcg ccgccggcgc cggccacgat ctcggccggc tgggcggcac
     3841 ggagaaccgc gaggtcgccg acgcccagca cgcgatcgcc gatcgccaag ttgccgtggg
     3901 cgacatagac ggcgcgctcg gcatgctcgg gcgagaccgc ggtcttggcg cccgccggca
     3961 gctccacgcc gacatagaag gtcggcgaga agtgcgtggt cggcgcggtg aggccgccat
     4021 aggtgccgac gatcagccgg agcgccgcgc cgccgtcgcg ccatgccggc agcttcgcca
     4081 ccgcgacatg ttcgaacgcc ggcgcggtct cctcatggct tttcggcagc gccacccagg
     4141 tctggacgcc gtgcatgcgg aagcccgtgg cccgcatctc cggctcggtg cgctcgctgt
     4201 gggcgatgcc gctgccggcg gtcatccagt tgacgtcgcc cggccggatg gcttgcgtat
     4261 agcccaggct gtcgcgatgg aagatcccgc cctcgaacag gtaggtcacc gtggcgaggc
     4321 cgatatgcgg gtgcgggcgc acctccatgc cgccgcccgg cggcacgtcc attggcccga
     4381 aatggtcgag gaagatgaac ggcccgacca tccgccgctt cacgctgggc agcacgcgcc
     4441 gcacggcgaa gccgccgccc agatcgtggg cgcgaccctg gatgagaagc tcgatcgggt
     4501 cggccatctt gttctccttc tcctcatgtg ctgcaacggc gcggcatgag cgttcacgac
     4561 ctctcgccgt tcttcgcgcc ccgcagcatc gccgtcgtcg gcgccggcga gcgggcgacg
     4621 tcatcgggcg gcgcggtcat gcagctcctg cgacaggccg gttatcgcgg aagagtcgtg
     4681 ccggtcaatc ccaaaggcgg cacgattttc ggttacgagt cggtgacttc gatcgccgac
     4741 atcgatccgc cggtcgacct cgccgtgatc gtcatccggc ccgacgccat cctcgacgcc
     4801 atgcgcgaat gcgccgaccg cggcatccgc aatcttttaa tcctgcccgg cggtttcgcc
     4861 gaagcgggac cgctcggcgt ggcgcgcaac gaggcgctgg tgaagctcgc ggccgagcgc
     4921 ggcctcacgg tcgccggtcc gaactgcgcc ggcatcatcc atctcgaccc ggcatggcgg
     4981 ttcgccgcaa cgttcctgcg cgatctgccg cccggcagcg cggccggcgc cggcaacggg
     5041 cttgccttca tctcgcagtc cggcgcgctc gccgaggagt tcatcgacaa ggccaacagc
     5101 cggacgctgc cgcttacctc ggtggtctcg gtcggcaatg ccgtgcatct cggcgtcgaa
     5161 gactatctcg cctggctggg cgagcggccg gagatcggcg cggcgctgct ctatgtcgaa
     5221 tcgatcgacg accacgagcg cttccgcacg ctggcgcgcg cggtggccgc aagaaagccg
     5281 gtcattgccc tgttcggcgg ccgcaccgcg atcggtgcgc aggccgcgac ggcgcatacc
     5341 ggcgcggtcg ccaacgacga tgccgccatc gacgccttct cggcgtcctg cggcatcgtc
     5401 cgggtcgaga gcctgcgccg cctgctggtg gcggccaagg cgttcggccg cttcccgcag
     5461 ggactgggca agcgggtgct gatcctgtcc aattcgggcg gtccgggcgt gctgtgtgcc
     5521 gaccgcgcca gcctggaggg cctcgagctc gacgctctgc cgaaggcgat ggtggaggta
     5581 ttgcgccagc gcctgccgcc ggaagcctcg gtcgccaatc cgatcgacct gctggccgac
     5641 gcgcgcgagg accgcttcgc actcgccttc gaggcggcga tgacccacgc cgccgatgcc
     5701 tacgacatgg tgctgatgat ccatgtcgtg cctttcatgg tcgatgctgg cccggtcgtc
     5761 ggccggttgg cggagctggc cgcgcgcgcc aagttgcctc tgctgcacag catgatggga
     5821 accctgcccg agaaggccga gtggttcgct accatggagt gcgccggtgt tccgatgttc
     5881 aacgatgtcg aggaaatggc cgaggccgcc ggcttgctgg cgcgctatcc gatgctccgc
     5941 gattccgctc gcaagagtcg tccgttgcct gcgacgtttc gtgatcgccg ccatcgctga
     6001 atcgaaaaat cgttcgtgta caacctatta agcttatttc tcgggtgttg catttttgca
     6061 actttttgtt ggacttgtgg atgctccgtg gccagtatcg accgcagcgg ggcagagaag
     6121 cgtggggcgc cgaccgtgta gggtcggtga gttcgctgat tagcctcttc gacaatgcgt
     6181 agcgttcaat ggatcgggag agaggctgat ggcgttcaag acgacgcgag acccacgcgc
     6241 ccagcgctgg cgaatcgtcc gaaacctgat ctcagcaacc gctgcaatta ccaccttcca
     6301 gcttctttgc gccgccgagc cgatggctca ggtcaaggcg cccagcaaga accaactcaa
     6361 ccccgccgcc aaggccgcct cttccgaaga cgtccagccc ttctccatcg gcaccgacgg
     6421 ctcggtcgct acccagctca tgaccctcaa gatcgacccg gccgacgcgc aagccgccgc
     6481 cgacgcagtc gccaaggcgc tcggccagct cgaccacaag accaccagtt ctggccgcgc
     6541 gatcctggaa tcgcagggcg ccggccagcc caagcgtctg gttaccctgc agctctattc
     6601 ggccaagtcg ctagccgtcg aactgcaccg tggcgccgac ggcagctacg gctacaagct
     6661 cgcgcccggc gcgaccgaac aagacgatga gcgcgtctcc agcctgccca gcgcgacctc
     6721 cacggccgga cccggcgctc ggtcgctggt cacgggctcc gtcggtatcg tgaaagccag
     6781 cagctcgacc ttggcggcca acctggcgcc gatcggcgcc agcgcggcga cgctcaagga
     6841 actgacccag gccctggcgg gtttcgcgcc tgccgccgcc aagatcgaag ttctgaaggg
     6901 ccgcaccgtc gatggcgcgc cgcgcattct cgcggcaagc gtgggcgaag gtcagggcaa
     6961 gcactccttc tggtggtttg cgccgcccag ccagccggaa ggctggttcg acgaccaggg
     7021 ccgccgcctg ggcggcacgg cactggccga gcccaagccc gactcgcgca tctcctcgcc
     7081 tttcggcacc cgccgctact acggccgctc gaccggcggc ggcttccaca acggcatcga
     7141 ctacgagggc aagatcggcg agccgatcta tgctgcggcc gacggcgtaa tcaatcacca
     7201 gggctggtac ttcaattacg gccgcacggt gaagatcagc catgccgaca atttcgagac
     7261 gctgtacgcc cacatgtcgc gttttgccga cggtttcggc ccggggagca aagtccgcaa
     7321 gggcgacctc atcggctatg tcggctcgag tggtcgctcg accggcgcgc atctgcactt
     7381 ctcggtgatc gtgcacggcc agttcgtcga tccggcgccg tacgtctcgg agaagggcgg
     7441 caacagcgtg ctggtgggcg aatcgctggt cgtgttccgc cagtggcagc aggacgtgcg
     7501 caaggccgcc agcggcgcgg agagcggcga taagcgtttc cgcttcctgc aaggcgctga
     7561 gccctggacc cacaatccct tccagcagcc cagcctcgac cgcctctgat ccgccacagt
     7621 cggacggccg gcgccgttgc gcgtgccggt ttgatcgcct aggaagtgcg ccgtcgccgg
     7681 aacggccacc ccaggcggcc gacaaggcgt caaaggcaat cacgaaggga cgactgaaat
     7741 gttcaacaaa tatgtggccg ctggcgtcgc cgcggcggcg ctggtcggcg cggcgggaac
     7801 cgcgcaggcc ggcaaggacc tcgacgccgt caaggcgcgc gggcagctga tttgcggcgt
     7861 cagcaccggc gttgccggct tcgccgtcgc cgacggccag ggcaagtgga ccggtctcga
     7921 cgtcgacacc tgccgcgccg tcgcggccgc cctgttcggc gattccgaga aggtgaagtt
     7981 cgtgccgacc accgcccaac agcgcttcac cgcgctgcag tcgggcgagg tcgacatgct
     8041 ggcgcgcacc acgacctgga cgctgacccg cgacaccgcg ctcggcttcg acttcaccgg
     8101 catcaattac tatgacggcc aaggcttcat ggtgaacaag aagctcggcg tgaaaagcgc
     8161 caaggagctg aacggcgcca ccgtctgcgt gcagcccggc accaccaccg agctcaacct
     8221 cgccgactat ttccgcgcca acaagatgac cttcaagccg gtggtcatcg agaaggtcga
     8281 ggaagtgcgc gccgccttct tctccggccg ctgcgacgtg ttcacgaccg acgcctcggg
     8341 cctctattcg acccgcgccg ccaacgcccc caacccggac gactacatca tcctgccgga
     8401 gatcatctcc aaggagccgc tcggcccggt ggtgcgccat ggcgacaacc agttcgccga
     8461 tatcgtgcgc tgggcgctgt tcgcccagct cgaggccgag gagtatggca tcacctcgaa
     8521 gaacgtcgac gagatgctga aaagcgacaa ccccagcatc aagcgcatcc tgggcgtgac
     8581 gccgggcatg ggcaaggcgc tcggggtcga cgaaaagtgg gtctacaaca tcgtcaagca
     8641 ggtcggtaac tacggcgaga tgttcgaccg caacgtcggc gccggctcgc cgctcaagat
     8701 cgcccgcggc cagaacgccc tgtggaccca gggcggcctg caatacgctc cccctattcg
     8761 ctgatattgg tcacgcgatt cgccgctcac gttcctctcc cccgctaggg ggagaggcta
     8821 ggtgaggggg aatcgacgtg cgtggccccc tcacccaacc tctcccccta gcgggggaga
     8881 ggagcgcagc cgccaaccgc cgccccaaaa aggcggcggc tttcatttgg cctgttgctt
     8941 gcttgccccg gcaaggggaa acttgcccca gggcaacaag tgggaggcga acaatgcaca
     9001 aggtatcagt ggcgacggcg gcggctctgg ccgcggtcct gacctcgacc ggcgccatgg
     9061 ccggcaagga cctcgacgcg gtcaaggcac gtggcgcgct gatctgcggc gttcccacag
     9121 gaacggcggg cttcgcgctg gccgacagcc agggcaagtg ggtcggcctc gatgtcgatg
     9181 tctgccgtgc cgtggcggcg gcgattttcg gcgacgccga caaggtgaaa taccaggcgc
     9241 tcaccgccca gcaacgcttt acggcgctgc agtcgggcga ggtcgacatt ctgtccaaca
     9301 acacgaccat aacgctgacg cgcgacacgg cgctggggct cgatttcacg gccgtcacct
     9361 actatgatgg ccagggcttc atggtgaaca agaagctcgg cgtgaagagc gccaaggagc
     9421 tcaacggcgc caccgtctgt gtcgcaccgg gcaccaccac cgagctcaac ctcgccgact
     9481 atttccgcgc caccaagatg agcttcaagc cggtggtcat cgaaaaggtc gacgacatcc
     9541 gcgcggcctt cttttccggc cgctgcgacg tctacaccac ggatgcctcc ggcctctacg
     9601 cgacgcgggc agccaacgtg ccggcaccgg ccaagatcga ggacttcatc atcctgccgg
     9661 agatcatctc caaggagccg ctggcgccgg cggtgcgcca tggcgacaac cagttcgccg
     9721 acatcgtgcg ctggacgcag tatgccatgg tcgaggccga ggagtacggc atcaattcga
     9781 agaacgtcga cgagatgctg aaaagcgaca accccaccat caagcgcatc ctcggtgtga
     9841 cgcccggcat gggcaaggcg ctcggggtcg acgaaaagtg ggtctacaac atcgtcaagc
     9901 aggtcggtaa ctacggcgaa agcttcgacc gcaatgtcgg cgccggctcg ccgctcaaga
     9961 tcgagcgcgg tctcaacaag ctgtggaccc agggcggcct gcagtacgct ccaccgatcc
    10021 gctgaaacat gtttcgaggg agcgacaggg ttgcaagtgg gcgattccct cttagactga
    10081 cggcaacatc gatcgacaag ggcgcgcgga cgaaccgcgg ccgacaaggg ggctagccaa
    10141 tggcagttga ggcactgggc tccgcgccgc gcgcgaaagt ggcaccctgg aacgatccgg
    10201 tcatccgcgg ctgggtcttc caggtcgtcg tggtcggcct ggtcggcctg cttgcctggt
    10261 acctcgtctc caacaccgtc gaaaatctcg cccgccagaa gatcgccagc ggcttccact
    10321 acctcgagcg cgaggccggc ttcgagatcg gcgacacgat gatctcctac tcgccggcca
    10381 gcacctacgc ccgcgcgatc ttcgtcgggc tcttgaacac gctgaaggtt tccgtcctcg
    10441 gcatcgtcat ggcgacgatc ctgggcacgc tgctgggcgt cggccggctg tcgcacaact
    10501 ggctgctcgc caagatctgc gaatggtatg tcgaggcctt ccgcaacgtg ccgctgctgc
    10561 tctggctgtt cctgttctac aagctgatca gcgaggcctt cccggggccg cgccaggcga
    10621 tcagcgtgct gagttcgttc tacctttcca atcgcggcct ctactttccg gtgccgctcg
    10681 ccgatccgat ccacatctgg atgggcctcg ccctgctggt cggcatcgcc ggcgccgttg
    10741 tgctgcatcg ttgggccagg aagcgccagg acgcgaccgg ccagcccttc ccgtcgatct
    10801 cggcgggctt cggcctggcg ctcggcctgc ccctgctggt gtggctgctg ggcggcgcgc
    10861 cgcatcacct gagctggccc gagctcaagg gcttcaactt cgaaggcggt acggtgatcc
    10921 agccggaatt caccgccctg ctgctcggcc tggtgctcta cacctcggcc ttcgtcgccg
    10981 agatcgtgcg ttcgggcatc ctggcgctgc acaaggggca aagcgaggcg gccgccgcgc
    11041 tcggcctgtc gcgcggccag gtgatgcggc tggtgctgct gccgcaggcg ctgcgcgtga
    11101 tcgtgccgcc gatgaccagc cagtatctca acatcaccaa gaacagctcg ctcgccattg
    11161 ccatcggcta tcccgacctg gtggcctcgc tcaacgtcac catcaaccag accggccagg
    11221 cgatcgagaa cgtgctcttg atcatggcgg cctatctctc ggtcagcctg tcgatctcgg
    11281 ccttcatgaa ctggtacaac aaacgcatcg ccttgaggga gcgctgagcc atgaccgacg
    11341 tcttgcccgt cggcgagcgc cgccagctcg ccccaccgat cgacgagacc ggcccgttcg
    11401 gctgggcccg caagcgcctg ttctcgagct gggccaacgg catcaccacg gtggtgttgc
    11461 tcgtcgccat cggctggatc ctgtcgtggt tcatcgactg ggcggtcctc accgccaact
    11521 tcaccgcctc gaccggcagc gaatgccgcg gcggcggcgc ctgctgggcg ctgattcggg
    11581 aaaagttccg cctgatcttc ttcggcacct tcccctacga gcagcaatgg cggcccctgt
    11641 tcgccgtcgt cgccatgctg gcgatgctga tcttcagcgc cgaccggcgc atgtggaact
    11701 ggcgcctgct ggtgatctgg ggcgtcggct cgttcatcac cttcctgctg atgttcggcc
    11761 agctccacat tccgctcagc ctgttcctgt tcgtcgccct ggtggtgggc ggcatagggc
    11821 tcgccatgcg caaggccatc gccgcacccg gcgagatgaa cgcctatcgg gtgctggccg
    11881 ccatcggcgc catcggcctg gtgttgcgcc tggtcggcgt cctgccggcc tggagcctgc
    11941 ccatcgcgcc gttcagctac gtcgagacca gcctgtgggg cggcatcccg gtgacgctga
    12001 tcctcgccac ctacggcctg gtgttcgcct tcccctacgg catcctgctg gcgctcggcc
    12061 ggcgctccca gctgccgctg atcaagggcc tgtgcgtggg cttcatcgag ctgatccgcg
    12121 gcgtgccgct gatcagcctc ctgatcatgg cctcggtcat gctgccgctg ttcctgccga
    12181 gcggcgtcac catcgacaag ttcctgcgcg cccaggtcgc cgtcatcctg ttcgccggcg
    12241 cctacatcgc cgagatcatc aggggcggcc tgcagtcgct gcccaagggc cagttcgagg
    12301 cggccgacgc gatgggcctc aactacgtgc agaagaccct gctgatcatc ctgccgcagg
    12361 ccctgcgcgt ggtgatcccg cccttgatca acaccttcat cggcttcttc aaggacacct
    12421 cgctggtgct gatcatcggc atcttcgact tcctcaacac cgccaaccag gcgctggtcg
    12481 atcccaactg ggccggtttc cccggcgagg tctacctgtt cgccgccttc gtctatttct
    12541 gcttctgcta ctcgatgtcg cgctacagca agtatctcga ggtcgagctc aacaagggaa
    12601 cgcgccgcta ggcgccgcga ggagaacgcg accatggccg ccactgcgca cgacctttcc
    12661 aatgccccct cggtgatcac gctgaccggc gtcaacaagt ggttcggcca attccacgtg
    12721 ctgagcgaca tcaatctcga cgtcaaggaa ggcgagaaga tcgtgatctg cgggccgtcc
    12781 ggctcgggca agtcgaccct gatccgctgc atcaaccggc tggaagagca ccaggccggc
    12841 gacatcgtcg tcgacggcgt cacgctctcc aacgacgtca agaacatcga ggcgatccgc
    12901 cgcgaagtcg gcatggtgtt tcagtcgttc aacctcttcc cccacctcac catcctcgag
    12961 aacctgaccc tggcgccgat ctgggtgaag aagatgccca agcgggaggc cgaggagatc
    13021 gccatgagcc tcttgaagcg cgtgcgcatc cccgagcagg cgctgaaata tcccggccag
    13081 ctgtcgggtg gccagcagca gcgcgtggcg atcgcccggg cgctctgcat gcggcccaag
    13141 atcatgctgt tcgacgagcc gacctcggcg ctcgaccctg agatggtcaa ggaagtgctc
    13201 gacgtcatgg tcgagctggc gcgcgagggc atgaccatgc tctgcgtcac ccacgagatg
    13261 ggcttcgccc gcgccgtcgc cgaccgcgtg atcttcatgg acatgggcga gatcgtcgag
    13321 cagaacgagc cggaagagtt cttcgccaat ccgcgaaacg agcgcaccaa gctcttcctc
    13381 ggccagatcc tgcaccacta gagcacgttc tatttgaata gatgcatctc atcgctgggg
    13441 gcgcgccact ccagtggcgc gtcttcgcca gatccacagg aagatcgcgc cactggagtg
    13501 gcgcgccccc ggcaaaaaga ctgagtccac catgaaaatc ctggtcaccg gcggcgcggg
    13561 cttcatcggc tcggctgtcg tccgccacat catccgcgac accgactgga cggtggccaa
    13621 cgtcgacaag ctgacctacg ccggcaatct cgaatcgctg gctgaagcgc gcgacagcaa
    13681 ccgacacacg catttcaagg tcgacatccg cgaccgcgag gcgatggacg acatcttccg
    13741 cggcttcgag cccgacgcgg tgctgcatct ggcggccgag agccatgtcg accgctcgat
    13801 cgacggcgcc gcacccttca tcgagaccaa tgtcggcggc acctacaccc ttctcgaggc
    13861 cgcgctggcc tattggcgca cgctcgacga gaacgcccgc acgcgcttcc gttttcagca
    13921 catctcgacc gacgaggtgt tcggctcgct gggtccaacc ggcaagttca gcgagaccac
    13981 gccttaccag cccaattccc cttatgccgc gagcaaggcg gcatccgacc atctggtgcg
    14041 cgcctggcac cacacctacg ggctgccgac gcttgccacc aactgctcca acaattacgg
    14101 cccctatcac ttccccgaga aactgatccc gctcaccatc atccgcgcgc tacgcggcga
    14161 gcgactgccc gtctacggca aaggcgaaaa cgtgcgtgac tggctgcatg tcgaggacca
    14221 cgccgcggca ctgaccctgg tgctgcgcca gggccggccc ggcgagacct acaatgtcgg
    14281 cggcgacagc gagcagcgga atatcgatgt ggtgcacgcc atctgcggcc tgctcgacga
    14341 gatgctgccc aacaccatga accgcccgca cgccaagctg atcgaattcg tcaccgaccg
    14401 cccgggccac gacgcgcgct atgccatcga tgccagcaag atccagagcg agctcggttg
    14461 gcggccgcgc cacgatttcg aggacggcct gcgccagacg gtgcgctggt acctcgacaa
    14521 ccgcggctgg tgggaacgcg tcatgagcgg cgcctatcgc ggcgaacggc tggggttgaa
    14581 gagctagact ggtgccgcaa ccgcagcgcc tggcggccgt tgaatcggga caatggaggc
    14641 cagcatgaga cggcttggat ggatcgtcct ggctgccctg gccggcagca tgggcgcatg
    14701 taccgacgac aacgccttat acacgtctac gaagttagtc cccggctata cgccgtcggg
    14761 atacaccgcc aacgtccctg acagtcggca agaccgcaac cgcaacgccg actggcgcga
    14821 gcgctagcag agacgttcag gcaacgagct gcttcttgaa gaaggccatc gtgcgctccc
    14881 acgccagctt ggccgacgct tcgtggtaac gcggcgtcga gttgttgtga aagccgtgct
    14941 gagtgccggg gtagatgtac atttcgtaag gcacggcgtt cgccttcaag gcgccctcga
    15001 acgccggcca cagcgcgttg atgcgctcgt cgctctcggc gtactggatc aggagcggcg
    15061 ccttgatcgc cgacacggcc gccgtctcgg gcgccgcgcc gtagaacggc acgcccgctt
    15121 gcatgtcgcc gcccaacgtg acggccagga aattggtcgt gccgccgccc caacagaaac
    15181 ccgtgacccc gagcttgccg gaggacagcg cgtggctctt caggtagcgc gcgctgttca
    15241 gcatatcggt gcgcagcttg gcctggtcga ggccggcctg gagggtacgg ccatcgtcgt
    15301 cattgccggg atagccgccg acgggcgaca ggccgtcggg cgccagggcc aggaaacctt
    15361 caacggcggc ccggcgggca acgtcttcga tgtagggatt gagcccgcga ttctcgtgga
    15421 tcaccaggac ggtggcgaac ggccccggac cattgggctg aaccaggtat ccgcgcatcg
    15481 ttccggaggt gccgcccggc gacggatagg tcacgtatcg ggccttgatc cgctgatcgg
    15541 tgaaggagat cgtctgggct cgcgcatagt gcggcaacag cgcctgcgcc atggcgaggc
    15601 cgccgatcgt caccgcggca gcctgctgca ggaaggcgcg gcggtcgatg cggccatggc
    15661 agtattcgtc atagagctcg aacacgcgct ggtcgatctc gccctgcgtc aatggttcga
    15721 tgttcagctg ttcagacatt cgatgccctg ccctcccccg gcgtgatcgc gcgccgtaag
    15781 gtgatgccag gaatagcgac cggtcaagcc tgccgcgcct caggaccggc cgacgcggcg
    15841 tcttgtctgc ggcttgtcgg ccgtcttcga aggcgcgacg gtcagccgcg cgatcagacc
    15901 gctgcggctc tgtcccgtcg tgcgcgccat gtcgtcgagg cgccgcaaga tccgccgcgg
    15961 cagggtgatg ttgacccgtt caacggtgtc gtcgaagaac gattcttcaa gatcgatcag
    16021 gccgaccgcc caacccttgc aaccgcgaag ctggcgtaca ctttcaaggg ttgaaggggg
    16081 tggcaccgac attccctggt ccaaggctgc ctctatccac gccgccgccg cctctttggc
    16141 agcatccacc gcctcgtcca aggtatcgcc cgcagaaaag cagcccggca aatcgggcac
    16201 gacgacaccg aaagccgatg taccggttcc ttcttcgacc agaatcggat agcgcattag
    16261 acacctgcct gcttgcggat cttcgcgacc agtcccttgc ccaggtcctt cttggggtgc
    16321 ggggtcctgc cgccacctcg atccgaggcc agccgagcgc tgtcgcacca tccgaggagc
    16381 ggggctgcgg tctggcagga ttgcggcgga ttggtgccgt ttgggcacgg caccctttca
    16441 tcacaccccg caagcaaccg cgcggccgga ctcgggttga ctccttcaga agcgcaagga
    16501 gaccgccatg agatctgtcg tttacatcgt tgcggcagcg gcgcttgccg gggcagtcgc
    16561 cggctgcgcg gacccgtact atccgcgcta cggctactcg cagggctatt actatccgtc
    16621 cagcacccgc tactaccagc agcctgccta cgcctatacc tacccgacct acacttacca
    16681 gaccgcttac gcctacccgc ctggttacgg ctaccggtcg acgggcgatt actatcgaaa
    16741 ctacaacgga attcaccctg gtccggaata ctatccttaa agccagggct tgatctctgg
    16801 gctcatccgc ccagcgtcgc ctgcacaacg gcggccacct cgtcgaccgc ctcaggcttc
    16861 agatgcgcgc ccatgggcag gctgagcacc gtgtcggcga gcttctcggc caggggaaac
    16921 gagcctttgg ccaggccgag atcggcgtaa gcctgctgca ggtggggcgg gatgggataa
    16981 tggatcaagg agccgatgcc cgccctgtcg agtgccgcca tcagcgcggc gcggcgctcg
    17041 gtgcgcacga cgtagaggtg ccagatcggc tcggcccact gcggcgcgcg cggcaggtca
    17101 agaccggcaa tgcctgaaag tctgtcgtca tagcgcgcgg ccaccattct tcggtgttcg
    17161 ttccaggcgt cgagccgagg cagcttggcg cgcaggaagg cggcttgcag ctcgtccagc
    17221 cgcgaattga ggccgcgctc gaggttcacg tatttgacgc ggctgccgta gttgcgcagc
    17281 gcgcgcagcc gttcggcgag gcggccatcg tcggtggtga ccgcgccgcc gtcgccaaag
    17341 gcgccgaaat tcttggtcgg gaaaaagctg tgggcgccgg catcgcccag cgagccggtg
    17401 cgccggccgc gcaccttggc gccctgtgcc tgcgccacgt cctcgaccac tttcagcccg
    17461 tgcttttggg ccaacgccat gatcgcgtcc atgtcggccg gctcgccgta gagatggacc
    17521 ggcatgatcg cccgggtgcg cggcgtgatc gccgcggcga tgcgctcggg atcgatgttg
    17581 ggtccggccg acgtcggctc gaccgggacc accttggcgc ccaccgccga caccgcgagc
    17641 caggtcgcga tataggtgtt ggacggcacg atcacttcgt cgccggcgcc gagatcccag
    17701 gcgcgcagca ccagctccag cgcctccagc ccattgccca gtccgacgca gtgtttggtg
    17761 ccgcagaagg cggcgtactc cgcctcgaag gcctcgacct ccttgccgag cacgaaccag
    17821 cccgattcca tgacgcgggt gtaggcggcg tcgagctcgg gtttcagctc cgcatagatc
    17881 gccttcaggt cgagaaaggg gatcatggtc ttcccgccgc ctcgcgcttg aaaacctcgt
    17941 agtcgcgcag atactcggcc tcgtcgtaga gcgtcgaggc gatcaccacg atcaccgact
    18001 gcggtgcaaa atcggtgagc tcatgccaca cccaggtgcc gacctggagc gccctcgccg
    18061 gatcatcgag cctcacggtt tcctggcatt tgccgtcgtc gagatgcacg cggcagccgc
    18121 cgtgcgcggc cacgaacacc agctccgtct ggcgatgccc gtggcggccg cgccattggc
    18181 ccggcgcgat gtgatgcagc cagaacaggc gccgcggtgc aaagtcgagg cccttgccca
    18241 gctccaggaa gttcacatgg ccgcgcgcgt cggacgcgcc gggaacggcg atccagcggc
    18301 agttgcgcgt cttgagaaca gggtcggtca tggttccgtt gtcgagaacg cccggcttca
    18361 ttgcaggtaa tggattgcct cagcgccgac cggcgcgcca cgacgccaga cggacagcga
    18421 tctgacggcg aaagacgatg gccatcacgg ccaccaccat cgcgacgatc cacagcacct
    18481 ccagcgatcc gtcgccgccg tccggcgaaa ggccgaacca ctgctcaatg aagtccatcg
    18541 ttctctcctt ggtcactctg tcatgtcggg agccgttcgc gctccaggat acgcagtttc
    18601 cgccattgca tgtacaccac tccgctcagc gccaccaagc cgcccgtgat ctgatacagg
    18661 ttgggcataa agccgtaggc catcgaccat agcacggcgc agaacggcac caggttgacc
    18721 cacagcgagg cgacggcgac gcccagccgg ctggcaccga tattccaggc ataactgccg
    18781 gcgccgctgg ccaggatcgc caccgtgatc agctgcgtcc agatccaggg atcggagacg
    18841 ccgaacggcg atctcgccca gccgacggcg accagcccga ggctccacag gatcagccag
    18901 cccatggccg acagcgaggc gacataggcg cggtggagct ggcttgcccg gtcgaaccag
    18961 gcctgcgcct tgatgctgta gagcgtccac agcacgttgc tgagcagcac gacgatctcg
    19021 ccgccgccga acgtcagccg accggcgccg aacaggctgc tcgacgacag gatcagcccg
    19081 cccagcacgg tcagcgccaa ggcgacaccg aagcccgggt cgaagcgctg gccggtgctg
    19141 agccgcaccg tcgtcgccgc gaccagcggg cccgccacct gcaccgccgc ggcggtgatc
    19201 gggttgctgt actgcaggcc aagcgcatag aaggcgaaga agctcgccat catcaggcca
    19261 agcagcagga agcggccgac atcgatatcc atccggagcg cgcgccggcc ttcgatcatc
    19321 cacagcagca gggcgagcga agcggtggcc gccaccgtgc gcagcgccgc catcggcatc
    19381 aggtcgaaat gcgacagcat caccttggtg acgggcaggt tggcgcccca gctcgcgccg
    19441 acgaacacca tcgccgcgaa ggcgcccagc agatgaccgc gatcgcccat caacggcggc
    19501 gcacagcctc gtagccgacc cggcaatcgc cgtagacgtc gggcttctcg gtcgaaacgc
    19561 gggcctcgat cacgccgggc tgcgccagga ggaggtcgag gatggcgtcg accagcgctt
    19621 cctgcaggtt gaagtggcgc gacttggcca gcgccacgat gccgtcatgc acgacgtcgt
    19681 agttgagcac gttggcgatc cggtcgccgt gcgccttttc ggccggcgcc agcagcaggt
    19741 cggcattcac caccacggtc tgcggtccct tgcgctcgaa atcgtggatg ccgatcgaga
    19801 cctgcagcct gaaatcgcgg atgaagatgc ggttcatgtc atttcttctt gttgtcgaag
    19861 gcgatgtcgc gcgcgcggcc tatgagatgc tcgccgctgt cgacgatcag ggtgtcgccg
    19921 gtgaaggaag gcgtggccac gatgaagcgc agcgcgcgca ccaagtcgtc ggtcgttacg
    19981 cccacgccca agaggttctc ccgatgctgg cgcttgaagc cgatgtcggt ctggttgccg
    20041 ctgcgcaagg tgaggccggg cgcgatcccg gccacccgca gttgcggtgc gaaagcctgt
    20101 gccagcaggg tcgtcaggcc ctgcaggccg accttggaga gcgtgtaggt gaggaagtcg
    20161 ggattgaggt tgtagagctt ctggtcgagc aggttcacga tcagcccggt ctcgcccttg
    20221 ggcagctggc gcgccagggc ctgcgacagc aggagcggcg cgcgcaggtt gatcgccatg
    20281 tgcaggtcga agtcggccgc cgtcgccgtc ggcgcgcggt cgagcttgaa cagcgaggcg
    20341 ctgttgacca ggcagacgag ctgcacgccg cgggcgcggc atttgcccat caaggcctcg
    20401 gcctgccgcg ccgacgagag gtccgcgcgc accgccttgg ccttgccgcc cccggccacg
    20461 atgtccgcca cggtccggcg cgccgcggcc gccgagcgat tgtaatgcac gaacaggaag
    20521 aagccgtcgg ccgccagcgc catcgccagc gcgcggccga cgcgcattcc cgctcccgtg
    20581 accagcgcgc ccttcatgct gcgaaatccg cctgccgtga ctaaaagaac ggcgggttct
    20641 agcatgcgct catgagttcg tccccgttcg agtcggtcga ctgcgttgtg atcggcgcag
    20701 gcgtggtggg tctcgcggtg gcccgcgccc ttgcccttgc cggccgtgag gtcatcgtcg
    20761 tggaagccgc cgaaggcatc ggcaccgaga ccagctcgcg caattccgaa gtcatccacg
    20821 ccggcatcta ttaccccaag ggcagcctga tggcgcgcac ctgcgtcgcc ggccgccgcc
    20881 tgctctacgc ctactgcgcc gagcacggcg tgccgcatcg caattgcggc aagctgatcg
    20941 tcgccaccaa ccaggctgaa agtgaaaagc tcgccgagat caagggccgc gccgaagcca
    21001 atggcgtgga aggcatgcga ttgctgagcg ccaccgaggc gatggcgatg gagcccaacc
    21061 ttctctgcac ggcggcgctg ctgtcgccca gcacgggcat cgtcgacagc cattcctaca
    21121 tgctggcgct gcagggcgat gccgagagcc ggggcgcgat gttcgccttc cacagtccgg
    21181 tgaagcaggg ccgcgccgtc gacggtggca ttgaaatcga tatcggcggc gccgaaccga
    21241 tgaacttgcg ctgccgtttg gtcgtgaact ccgctggcct gcatgcgccg gcactcgccc
    21301 ggaacatcgc cggcatgccc gccgaccgcg ttccgacggc gtattacgcc aagggaaact
    21361 acttcaccct cgccggacgc tcgcccttct cacgcctgat ctatcccgtg ccggtgccgg
    21421 gcgggctcgg cgtgcacatc accgtcgatc tcggcggcca ggccaagttc gggccggatg
    21481 tcgaatggat cgaaggcatc aactacacgg tcgacccgca ccgcgccgac aagttctatg
    21541 ccgccgtgcg ccgctactgg ccggcgctca aggacggcgc gctgcagccg ggctatgccg
    21601 gcattcgtcc caagatcgtg ccaccgggcg cgccggccca ggatttcatc gtgcaagggc
    21661 cggccgagca cgccgtgccg ggccttataa atcttttcgg catcgaatcg cccggcctga
    21721 cgtcgtcgct ggcgcttgcc gagcaggtgc gggcgatggc gggaaacgcc tgacgagccg
    21781 cgttgcggaa ggccgttccg gggactagtg cgcgcggacg aggttcgcta atgctggcgc
    21841 cgacagacgc atccgcgggg gaaatcggca gatgatcaag acgcgcttca ccgagatgtt
    21901 cggcgtaaaa cacccgatcg tgcagggcgg catgcaatgg gtcggccgcg ccgagctcac
    21961 ctcggcggtc gccaacgccg gcgcgctcgg cttcctgacc ggcctcaccc agccgacccc
    22021 ggaggatctg cgcaaggagg tcaagcgctg ccgcgagatg accgaccagc cgttcggggt
    22081 caacctcacc atcctgccga ccctggtgcc gcggccctac ggcgaataca tcgacgccat
    22141 catcgaatcg ggcgtcaaga tcgtcgagac ggcgggcaac aaccccaagc ccttcctgcc
    22201 caagttcaag gatgccggca tcaaggtgat ccacaaatgc acctcggtgc ggcacggcat
    22261 ctcggccgag aaggtcggcg tcgacgcgat ctcgatggac ggcttcgaat gcgccggcca
    22321 ccccggcgag gacgacgtac ccaacctggt gctgctgccg gcggcggcca acatcataaa
    22381 aatcccgatg atcgcctcgg gcggcttcgg cgatgcgcgc ggcctggtgg cggcgctggc
    22441 gctgggctgc gagggcatca acatgggcac gcgcttcatg gcgacccagg aagcgccgat
    22501 ccacgacaac gtgaagaaag ccctggtcga gagcgacgag cgctcgacct cgctgatcct
    22561 tcgcaccatg cgcaacacca gccgcgtcta cggcaactcg atcgccaaga aggcgatcga
    22621 gatggagcac gacggcaaga ccatccagga gatcggcccg atcgtcgccg gcgccaaggg
    22681 gcgggtggtc tacgagaccg gagacatgga gcacggcatc tggtcggccg gcacggtgat
    22741 gggcctcatc caggacgtcc cgacctgcag ggagctggtc gagcgcatcg tgcgcgaggc
    22801 cgaggacatg atccgcggcc ggctttccca ggcgatcgcg gcctaagcga cggcgg
//
LOCUS       DASWGA010000114         2676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2419121, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000114 DASWGA010000000
VERSION     DASWGA010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2419121"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..982)
                     /locus_tag="VF991_02720"
     CDS             complement(<1..982)
                     /locus_tag="VF991_02720"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEX9555379.1"
                     /translation="MNTRRLLACAALAAASLATAALALDRLFPPDLSRYHERSSETVD
                     ANGRLLRAFTTADGKWRLKTTVDDVDPVYLALLKAYEDRRFDSHWGIDPLAAARAAGQ
                     WIARGRIVSGASTISMQAARLLEPRPRGLLTKVIQSARALQLEWRYSKREVLAIYLTL
                     APMGGNLEGVRAASFAYFGKEPRQLSAAEAALLVAIPQSPERRRPERAGKSAQAARDR
                     VLVRGLEHGIIDRVLFDKAASRPVPDRRLAMPMQAPHLAAWLAGQSPGAIVPTTLRFE
                     LQSALAQLVAEERGQFADRAQIALVAIDNRTGGVVAWLGGSDYFGRAGQVD"
     gene            complement(998..>2676)
                     /locus_tag="VF991_02725"
     CDS             complement(998..>2676)
                     /locus_tag="VF991_02725"
                     /inference="COORDINATES: protein motif:HMM:NF036531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555380.1"
                     /translation="LAANQRELMTWPLKAGEVGFGKVAVAVSGPGNFAVRREWDIQVR
                     AAQTPSAVDTVSQLDAGRELTVDRNLTAPFLAGTAQVSVALSRTPGIDVAALLRALDK
                     YPYGCIEQTTSRALPLLYYNDVALLGYGPSDPRIADRVQDAIYRVVDMQLPDGSFGMW
                     GPYAPAAEWLQTYVLDFLLRARDQSMAVPAASLQRGLTWLNRNVEKLSPNAQAYGWYV
                     LAKGGLADPGRIRYFQDTKAADIKGGLAWAQLAAALNHVAEPGRARLAFALARQHIDQ
                     RDPGEYYGSPLRNRAAVLALATEAGGREALGEVVNAVRERLVAKIDQTTTQEQAWLLL
                     AARAMSAGGELAYSVDGQQRKAAAEPVVLNPDRAAIARGMRVTNDGERPVWLQVTARG
                     VPIDPQPAASEGLSVRRQFLTLSGQPANLARLRQNDRVIVSIDGRNLEGGYHEVALLD
                     LLPAGFEIESVLTEETVKSFPFLAKLSDTRIAEARDDRFFASFNLGRRTYRSWWDEAA
                     EGYTNSFHVAYIVRAVTPGSFALPAVNVSDMYAPRVYARSGMGSVAIAPR"
BASE COUNT          413 a          911 c          963 g          389 t
ORIGIN      
        1 gatcgacctg gccggcgcgg ccgaaatagt ccgagccgcc gagccacgcc acgacaccgc
       61 cggtgcggtt gtcgatcgcg accagggcga tctgcgcccg gtcggcgaac tggccgcgct
      121 cctcggcgac aagctgggca agcgcgctct gcagttcgaa gcgcagggtc gtgggaacga
      181 tcgcgccggg cgactggccg gcaagccacg ccgccaggtg cggcgcctgc atgggcatgg
      241 ccagcctgcg atcgggcacg ggtcggctgg ccgccttgtc gaacaggacg cggtcgatga
      301 tgccgtgctc gaggccgcgc accagcacgc gatcacgtgc ggcctgtgcg gatttgccgg
      361 cgcgctcggg ccggcgacgc tcgggcgatt gcggaatggc gaccagcagg gccgcttcgg
      421 cggcggagag ttgccggggc tccttgccga aataggcgaa ggaggcggcc cgcacaccct
      481 cgaggttgcc gcccatcggc gccagcgtca ggtagatcgc cagcacctcg cgcttggagt
      541 agcgccattc gagctgcaag gcgcgcgccg actggatcac tttggtcaaa agcccgcgcg
      601 gtcgcggttc gagcagccgg gcggcctgca tggagatcgt cgaggcgccc gacacgatgc
      661 ggccgcgcgc gatccattgg ccggcggcgc gcgccgccgc cagcgggtcg atgccccaat
      721 ggctgtcgaa gcggcggtcc tcgtaggcct tgagcaaggc gagatagacc ggatcgacgt
      781 cgtcgaccgt ggtcttgagc cgccacttgc cgtcggcggt cgtgaaggcg cgcagcaggc
      841 gaccgttcgc gtcgacggtc tcgctcgacc gctcgtggta gcgcgagagg tcgggcggga
      901 agagccggtc gagcgccagg gccgccgtcg ccaggctggc ggcggcgagt gccgcgcatg
      961 cgagcaggcg ccgcgtgttc atttcagcgc gatcctccta ccttggggcg atcgcgacgc
     1021 tgcccatgcc gctgcgggca tagacgcgcg gagcatacat gtcggagaca ttgaccgccg
     1081 gcagcgcgaa gctgccgggc gtcaccgcgc gcacgatgta ggcgacatgg aaggagttgg
     1141 tgtagccctc ggctgcctca tcccaccagc tgcgataggt ccgccggccg agattgaacg
     1201 aggcgaagaa gcggtcgtcg cgcgcttcgg cgatgcgcgt atcggagagc ttcgccagga
     1261 acgggaacga cttcaccgtc tcctcggtca gcaccgattc gatctcgaag ccggccggca
     1321 gcaagtcgag cagcgcgacc tcgtggtaac cgccctcgag attgcggccg tcgatcgaca
     1381 cgatcacccg gtcgttctgg cgcagccggg cgagattggc gggctggccg gacagcgtca
     1441 ggaactgccg ccgaacgctc agcccctccg aggccgcggg ttgcggatcg atcggcacgc
     1501 cgcgtgccgt cacctgcagc cataccgggc gctcgccgtc attggtcacg cgcatgccgc
     1561 gcgcgatcgc ggcccggtcg ggattgagga cgaccggttc ggcggccgcc ttgcgctgct
     1621 ggccgtcgac cgagtaggcg agttcgcctc cggcgctcat cgcccgtgcc gccaacagca
     1681 gccaggcctg ctcctgggtc gtcgtctggt cgatcttggc aaccagccgc tcgcgcaccg
     1741 cattcacgac ttcgccgagc gcttcacggc cgccggcctc ggtggccagt gccaggacgg
     1801 cggcgcggtt gcgcagcggc gagccgtaat attcgccagg atcgcgctga tcgatatgct
     1861 ggcgggcgag cgcaaaggcg agccgtgccc ggccgggctc ggcgacgtgg ttgagcgccg
     1921 cggcgagctg cgcccaggca agcccgccct tgatgtcggc ggccttcgtg tcctggaagt
     1981 agcggatgcg gccgggatcg gccaaaccgc ccttggccag cacataccag ccataggcct
     2041 gggcgttggg cgacagcttc tcgacattgc ggttgagcca ggtcagccca cgctgcagcg
     2101 acgcggcagg caccgccatc gactggtcgc gggcgcgcag caggaagtcg agcacgtagg
     2161 tctgcagcca ttccgccgcc ggtgcataag gtccccacat gccgaacgag ccgtcgggca
     2221 gttgcatgtc gacgacgcga tagatcgcgt cctgcacgcg atccgcaatc cgcggatcgg
     2281 acggcccgta acccagcagc gccacgtcgt tgtaatagag caacggcagg gcgcggctgg
     2341 tggtctgctc gatgcagcca tagggatact tgtcgagcgc acgcagcaat gccgccacgt
     2401 cgatgcccgg cgtgcgcgac aacgccacgc tcacctgagc ggtgccggcc aggaacggcg
     2461 ccgtgaggtt gcgatcgacg gtgagttcgc ggccggcgtc gagctgggac accgtgtcaa
     2521 cggcgctcgg cgtctgcgcc gcgcggacct ggatgtccca ttcacggcgg accgcgaagt
     2581 tgcccgggcc gctcaccgcg accgcgacct tgccgaagcc gacctcgccc gccttcaaag
     2641 gccaggtcat cagctcgcgc tggttggcgg cgagcc
//
LOCUS       DASWGA010000115         5817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2041496, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000115 DASWGA010000000
VERSION     DASWGA010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5817
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2041496"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VF991_02730"
     CDS             complement(<1..607)
                     /locus_tag="VF991_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555381.1"
                     /translation="MMLSVRDLHAYYGRAHILHGLSLEAGACEVVALLGRNGAGKSTA
                     MKAIMGLVPPAKGEVSFAGRRIERLPTYRIARLGLGYVPEERRIFTELTVMENLEVGR
                     QDPRQGAPVWTQDKLFTLFPNLAGMRERPGGSMSGGEQQMLTIARTLMGNPRCVLLDE
                     PSEGLAPIIVEQMAHSIRALKGEGLCVLLSEQNLHFSHAVAD"
     gene            complement(604..1350)
                     /locus_tag="VF991_02735"
     CDS             complement(604..1350)
                     /locus_tag="VF991_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007812363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555382.1"
                     /translation="MTAVLQVEGLRKAFGGVQAVYDVSFAIEAGELLALIGPNGAGKS
                     TCFNMLNGQLAPDAGIVRLGDRDIVGLRPRAIWRLGVGRTFQITATFASLSVRENVQM
                     ALYSHGRRLHSLLSRFGTAFTAEADSLLGQVGMLDQAERTCGVLAYGDLKRVELAMAL
                     ANRPRLLLMDEPTAGMAPKERVALMELAARLARERKVAVLFTEHDMDVVFGQADRIIV
                     LDRGQLIAGGTPEEVRANADVRAVYLGSAH"
     gene            complement(1347..3224)
                     /locus_tag="VF991_02740"
     CDS             complement(1347..3224)
                     /locus_tag="VF991_02740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9555383.1"
                     /translation="MNLPSILIQLLNGLAAASSLFLVSAGLSLIFGVTRIVNFAHGSL
                     YMLGLYSAYTLIETLGRTPLGFWSAVIVAALAVGLIGVLIEVLVLRRIYKAPELFQLL
                     ATFAVVLVIKDIALFAWGAEDLVGPRAPGLSTAVEIMDRRIPAYDLLLIAIGPVVLAA
                     MWLLLTRTRWGALVRAATQDREMVGALGVDQAKLFTSVFFVGSVLAGLGGALQIPREP
                     ANLELDLAVIADAFVVTVVGGLGSIGGAFLAAMLIGVAKAFCIGVGTAHWFGAEIVFS
                     KLTLVVEFLIMALVLVVRPFGLLGKPQAVQRIAADPAPPLSAPSWTFAGVWLALLLVT
                     PLLADRYVTILLTDIFCFALFAVSLHFIMGPAGMVSFGHAAYFGLGAYAAGLLLKRAG
                     LPMEAALVLAPLAAGAFAVVYGWFCVRLSGVYLAMLTLAFAQISWSIVFQWDSFTGGS
                     NGLFGVWPSAWLAGKTTYYYLALALCGVGIALLWRVLFSPFGYALRAGRDSPLRAEAI
                     GIDVRGLQWMAFMLAGAVAGLAGAVYAFSKGSISPSAISIAQSTDGLVMVLLGGVETL
                     TGPVVGAAIFTWLRDEVARRTEFWRAVMGGVILLIVLLFPQGLVGGLKALMIRWRESP
                     A"
     gene            complement(3336..4541)
                     /locus_tag="VF991_02745"
     CDS             complement(3336..4541)
                     /locus_tag="VF991_02745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555384.1"
                     /translation="MLTRNHLIAGAAALVALALVGPANAQAPIKLGELNSYKVFPAFL
                     EPYKKGWELAVEEVNAAGGVLGRKIEVVSRDDNGNPGDAVRVAEELLSREGASFLIGT
                     FPSNVGLAVADFAKQRKVLFIAAEPLTDKIVWDAGNAYTFRLRASTYMQTAMLIPDAA
                     KLNKKRWAIVYPNYEYGQSATQAFKTLLSAKQPSVAFVTEQATPLGKIDAGAVAQALG
                     DAKPDAIFSSLFGPDLTKFVREGQQRGIFKGVEVFNLLAGEPEYLDPLKEEAPDGWYV
                     TGYPWSEIKTPEHTKFLNAYQAKYKDYPRLGSVVGYSTIMSAVEAIRTAGSLDQDKLI
                     AAASGLKVLTPFGMVEYRPIDHQSTMGAYVGRIGVKDGKGYMKEWRFVDGKDALPSDA
                     EIKKMRPAN"
     gene            complement(4610..4987)
                     /locus_tag="VF991_02750"
     CDS             complement(4610..4987)
                     /locus_tag="VF991_02750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555385.1"
                     /translation="MSDPLKEALGVLNAFMAALNCGDEAGVNASYNFPHVRLASGKVT
                     VWQAPGDYKLKDFHARAGDGWAKSQWEDRAPIHVGSDKVHFAVEFSRWRNDGTELSRH
                     KSIYVVTRQDGHWGVQARSSFAA"
     gene            complement(5031..5165)
                     /locus_tag="VF991_02755"
                     /pseudo
     CDS             complement(5031..5165)
                     /locus_tag="VF991_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003527850.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
     gene            complement(5191..5775)
                     /locus_tag="VF991_02760"
     CDS             complement(5191..5775)
                     /locus_tag="VF991_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555386.1"
                     /translation="MADEMLQAMVKGRRLDKAYVNDGGDIAIHLTPGHELRAGIFASA
                     LDGMALLTHDRPVRGIATSGWGGRSFSLGIADTATVLAATAADADAAATMIANAVNAD
                     HPAIERRPAHDLDPDSDLLDLPVTVAVGALSQALIDEALDRGVAEARRLRLCGLIDSA
                     AISLQGYWRIDAQSYFEVANLADTGVCHPRSMGA"
BASE COUNT         1082 a         1969 c         1885 g          881 t
ORIGIN      
        1 ggtcggccac ggcatgggaa aaatgcaggt tctgctcgga caggagcacg caaagcccct
       61 cgcctttcag cgcccggatc gagtgtgcca tttgttcgac aatgatgggg gcaagccctt
      121 ccgacggctc gtcgagcagc acgcatcgcg gattgcccat caaggtgcgg gcgatggtga
      181 gcatctgctg ctcgccgccc gacatgctcc cgcctggccg ctcacgcatg ccggcgaggt
      241 tgggaaagag cgtgaagagc ttgtcctgcg tccacaccgg tgcaccttgg cgcgggtcct
      301 ggcggccgac ctcgaggttc tccatcaccg tgagctcggt gaagatgcgg cgttcctcgg
      361 gcacatagcc caaccccagc cgcgcgatgc gataggttgg caggcgctcg atgcgccggc
      421 cggcaaagct cacctcgccc ttggccggcg gcaccaaacc catgatcgct ttcatcgccg
      481 tcgatttacc ggcgccgttg cggccgagca gcgccacgac ttcgcaggcg cccgcctcca
      541 gcgagaggcc gtgcaggata tgggcgcggc cgtaataggc gtgcaggtcc ctgaccgaca
      601 gcatcagtgc gcgctcccga ggtagacggc gcgcacatcg gcgttggcgc gcacctcctc
      661 gggcgtgccg ccggcgatga gctggccgcg atcgagtacg atgatgcggt cggcctggcc
      721 gaacaccacg tccatgtcgt gctcggtgaa cagcaccgcg accttgcgtt cccgggccag
      781 ccgcgccgca agctccatca gcgcgacccg ctccttgggc gccatgccgg ccgtcggctc
      841 gtccatcagc agcagccgtg gccggttggc gagcgccatc gcgagctcga cccgtttcaa
      901 gtcgccatag gccagcacgc cgcacgtccg ctcggcctga tcgagcatgc cgacctggcc
      961 caggagcgaa tcggcttccg ccgtgaaagc ggtgccgaag cgcgacagca gcgagtggag
     1021 ccgacggcca tgggagtaga gcgccatctg cacgttctcg cgcaccgaca gcgaggcgaa
     1081 ggtggcggtg atctggaagg tgcggccgac gcccagccgc cagatggcgc ggggccgcag
     1141 gccgacgatg tcccggtcgc ccagccgcac gatgccggcg tcgggcgcga gctggccgtt
     1201 cagcatgttg aagcaggtgc tcttgcccgc gccgttgggc ccgatcaacg ccagcagctc
     1261 gcccgcttcg atggcgaatg acacatcgta aacggcctgc acgccgccga acgccttgcg
     1321 cagcccctcg acctgcaaca ccgcggtcat gcgggtgact cgcgccagcg aatcatgagc
     1381 gccttgaggc caccgacgag gccctgcgga aagagcagca cgatcagcag gatcaccccg
     1441 cccatcacgg cccgccagaa ttcggtgcgg cgggcgactt catcgcgcag ccaggtgaag
     1501 atcgccgcac ccacgaccgg gccggtcagg gtctcgacgc cgcccagcag caccatgaca
     1561 agcccgtcgg tcgattgggc gatggaaatt gccgacggcg agatgctgcc cttggagaag
     1621 gcgtagacgg cgccggccag gcccgcgacg gcgcccgcca gcatgaaggc catccattgc
     1681 aagccccgga cgtcgatgcc gatcgcctcg gcgcgcaatg gcgaatcgcg gccggcgcgc
     1741 agtgcgtagc cgaacggcga gaacagcacg cgccacagca gcgcgatgcc cacgccgcag
     1801 agcgcgagcg ccagatagta gtaagtggtc ttgccggcca gccaagccga gggccagacg
     1861 ccgaacaggc cgttgctgcc gccggtgaag gaatcccact ggaacacgat cgaccagctg
     1921 atctgcgcga aggccaaggt cagcatggcc aggtagacgc cggaaagccg cacgcagaac
     1981 cagccgtaga ccacggcgaa ggcgccggcg gcgagcggcg ccaggacgag agcggcttcc
     2041 atcggcaggc cggcccgctt cagtaaaaga ccggcggcat aggcgcccag gccgaaatag
     2101 gcggcatggc cgaacgacac catgccggcc ggccccatga tgaaatgcag gctgaccgcg
     2161 aacagggcga agcagaagat gtcggtcagc aggatggtca cgtagcggtc ggcgagcagc
     2221 ggcgtgacca gcagcagcgc cagccagacc ccggcgaacg tccaggacgg cgccgagagc
     2281 ggcggcgccg ggtcggcggc gatgcgctgc acggcctgcg gcttgcccaa aaggccgaag
     2341 ggccgcacca ccagcaccag cgccatgatc aggaactcga ccaccagggt gagcttggag
     2401 aagacgattt ccgcgccgaa ccaatgcgcc gtgccgacgc cgatgcagaa cgccttggcg
     2461 acgccgatca gcatggccgc caggaacgcg ccgccgatgc tgcccaggcc gccgaccacg
     2521 gtgaccacga aggcatcggc gatgacggcg aggtcgagct cgagattggc gggctcgcgc
     2581 ggaatttgaa gggcgccgcc caggcctgcg agcacggagc cgacgaagaa caccgaggtg
     2641 aagagcttcg cctggtcaac acccagcgcg cccaccatct cgcgatcctg agtggccgcc
     2701 cgcaccaacg cgccccaacg cgtacgggtg agcagcaacc acatcgcagc cagcaccacc
     2761 gggccgatgg cgatcagcag cagatcgtag gcgggaatgc gacgatccat gatttcgacc
     2821 gcggtggaga gcccgggcgc ccgcgggccg accaggtctt cggcgcccca ggcgaagagc
     2881 gcgatgtcct tgatcaccag cacgacggcg aaagtcgcca gcaattggaa cagttccggc
     2941 gccttgtaga tgcgccgcag caccagcacc tcgatcagca cgccgatcag cccgacagcg
     3001 agcgcggcca cgatgaccgc gctccagaag ccgagcggcg tgcggcccag cgtctcgatc
     3061 agcgtgtagg cgctgtagag gcccagcatg tagagcgagc cgtgcgcgaa attcacgatc
     3121 cgcgtcacgc cgaagatcag cgacaggccg gccgacacca ggaacaagga cgaagcggcg
     3181 gccagcccgt tcaggagctg gatgaggatg gaagggaggt tcacgaaacg attaccgtgt
     3241 catcccgaat cgcgcggatc tgatccgcgc tgaagtgagg gacctttcct gcggcctcaa
     3301 aggtccctcg ctgcgctcgg gatgacacag gtgcgtcagt tcgccggcct catcttcttg
     3361 atctcggcat ccgacggcag ggcgtccttg ccgtcgacga agcgccactc tttcatataa
     3421 cccttgccgt ccttgacgcc gatgcggccg acataggcac ccatggtcga ttggtggtcg
     3481 atcggccggt actcgaccat gccgaacggc gtcaggactt tcagcccgct cgccgcggcg
     3541 atcagcttgt cctggtcgag cgaacccgcc gtcctgatcg cctcgaccgc cgacatgatc
     3601 gtcgaatagc cgaccaccga gcccagccgc ggatagtcct tgtacttcgc ctggtaggcg
     3661 ttgaggaact tggtgtgctc gggcgtcttg atctcgctcc acggatagcc ggtgacgtac
     3721 cagccgtcag gcgcctcctc cttcagggga tcgagatact cgggctcgcc ggccagaaga
     3781 ttgaacacct cgacaccctt gaagatgccg cgctgctggc cctcgcgcac gaacttggtg
     3841 aggtcggggc cgaacagcga ggagaagatc gcatcgggct tggcgtcgcc gagcgcctgg
     3901 gccaccgcac cggcgtcgat cttgccgagc ggggttgcct gctcggtgac gaacgcgacg
     3961 ctgggctgct tggccgacag cagtgtcttg aacgcctgtg tggccgactg gccatattcg
     4021 tagttgggat agacgatcgc ccagcgcttc ttgttgagct tggcggcatc ggggatgagc
     4081 atcgccgtct gcatgtaggt cgaggcgcgc aggcggaagg tataggcatt gccggcatcc
     4141 cacacgatct tgtcggtgag cggctcggcg gcgatgaaca gcaccttgcg ctgcttggcg
     4201 aagtcggcga ccgccaagcc gacattggac gggaaggtgc cgatcaggaa cgacgcgccc
     4261 tcgcggctta aaagctcctc ggcgacgcgc accgcatcgc cggggttgcc gttgtcgtcg
     4321 cggcttacga cctcgatctt gcggccgagc acgccgcccg ccgcgttgac ctcctcgacg
     4381 gccagctccc agcccttctt gtacggttcg aggaaagccg ggaagacctt gtagctgttg
     4441 agctcaccga gcttgatcgg tgcctgcgcg ttggccggcc cgaccagggc aagcgcgacc
     4501 agggccgcgg cgccggcgat taagtgattg cgggtcaaca tgacatcccc cttctcgaaa
     4561 acgctccctt ggccgaccct agcgagcccg gcccacaccc gacaagcttt caggctgcga
     4621 aactcgatcg cgcctgcacg ccccaatgac catcctgcct ggtcaccaca taaatcgact
     4681 tgtgacggct cagttccgtt ccgtcgttgc gccagcggct gaactcgacg gcgaaatgca
     4741 ccttgtccga tccgacgtgg atcggcgcgc gatcctccca ttggcttttc gcccagccgt
     4801 cgccggcgcg ggcatggaaa tccttgagct tgtagtcgcc tggcgcctgc cagacagtca
     4861 ccttgccgct ggccagacga acatgcggaa agttgtagct cgcgttcaca cccgcctcat
     4921 cgccgcaatt aagggcggcc atgaaagcgt tgagcacacc aagcgcctcc ttcagtggat
     4981 cgctcatctc accccgcctc agcaagcacc atgctgctca atctgcccat ctagctaccg
     5041 ttttcaccga cgtggcgctt ctcggcaatg aaggcctcga aatcgaaggc cgtagcggca
     5101 ccgctggctt caccttcgtc aagcgcggca cgcagcgccg cgagcttggc ttccttctct
     5161 tcgagttcaa aagacgcgtt cttccccatc tcatgctccc atcgagcgag ggtgacaaac
     5221 tccggtatca gccaagttgg cgacttcaaa ataagactgc gcgtcaatcc gccaatagcc
     5281 ttggagtgaa atggcggcac tgtcgatcag accgcatagc ctgagccgcc gcgcttcggc
     5341 gacgccgcga tcgagggcct cgtcgatcag cgcttgcgac agcgctccga ccgcaaccgt
     5401 caccggcaga tccaagagat cgctgtctgg atcaaggtcg tgggctggtc gacgctcgat
     5461 ggcaggatga tctgcattga cggcgttggc gatcatggtc gcggccgcat cggcgtcagc
     5521 cgcggtcgcg gccagcacgg tcgccgtatc ggcgatgccg agcgagaacg agcgcccgcc
     5581 ccaacccgag gtcgcgatgc cgcgcaccgg ccggtcgtgc gtcagcagcg ccatgccgtc
     5641 gagggccgag gcaaaaatgc cggcacgcaa ctcatggccc ggcgtgagat gaatggcgat
     5701 atcgccgccg tcattgacat aggccttgtc gagccggcgg cccttcacca tggcctgcag
     5761 catctcgtcg gccaccgcgc ctgccaccgc ggccatcggc gtgatgtaga cggcgcg
//
LOCUS       DASWGA010000116         4686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2041631, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000116 DASWGA010000000
VERSION     DASWGA010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4686
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2041631"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VF991_02765"
     CDS             complement(<1..380)
                     /locus_tag="VF991_02765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555387.1"
                     /translation="MSHTRTTTKGSATGLLAHEAPGTMLRLGFGAIALACCLIAVSGD
                     ARARQEAPEDLAYCTRLHGLYWKYHANYYHHDGTWVQAELAQSDCDHGNVELGTKQLE
                     RILRDDLFVIPSERSPTYTGSAQR"
     gene            complement(822..1283)
                     /locus_tag="VF991_02770"
     CDS             complement(822..1283)
                     /locus_tag="VF991_02770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555388.1"
                     /translation="MTTTILSAKELAAKVAEEQKQKALAAEKAHAAEEKTKKALLEKL
                     RQPVGLSDDELLEKAAILINRAVESGQTSVQVFRFPHTLCTDNGRAVNQAEPGWEKTL
                     VGEPKQLYELWQRQLKPKGYHLRFEIIDYPNGMPGDVGITLSWPTEFTGHQ"
     gene            complement(1280..2533)
                     /locus_tag="VF991_02775"
     CDS             complement(1280..2533)
                     /locus_tag="VF991_02775"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006083 - acetate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate/propionate family kinase"
                     /protein_id="HEX9555389.1"
                     /translation="MSAAQSCVAVLNAGSSSIKFALYEAGRDGLLLFRGQVEGIGVDP
                     HLEARNLAGATVAERRWARAELDHHRATAEILTLGRELLAGRPVLGVGHRVVHGGTEF
                     AGPVRIDQGVMALLKKLVPLAPLHQPHNLAPIEAVAGSQPDLPQVACFDTAFHRSQPA
                     VAQEFGLPRELTAAGVRRYGFHGLSYDFIVTRLHEIDPALARSRLVIAHLGNGASLCA
                     VANGRSVASTMGFTAVDGLMMGTRCGAIDPGVLLYLMQERGLDAKAIEDLIYRRSGLL
                     GVSGISPDMRTLRQSKAPEAREAIDLFVYRIVREIGSMVAALGGIDALVFTAGIGEHD
                     ALTRAEVVAGCAWLGVKLDATRNAHGEGRISAAGSRVSAWVVPTDEERTIARNTYALL
                     APRPQVTQRPAESALVMAKATGEAA"
     gene            complement(2546..3325)
                     /gene="fabI"
                     /locus_tag="VF991_02780"
     CDS             complement(2546..3325)
                     /gene="fabI"
                     /locus_tag="VF991_02780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEX9555390.1"
                     /translation="MPDIAIPVLAGKKALIVGIANDQSIAYGCAKAFRAAGADLAITW
                     LNDKARPHVEPLARELEAEITTGLDVARPGQLEALFGDIAGRWGRLDILVHSIAFAPL
                     ADLRGGLLDCSAEGFATAMDVSCHSFIRMARLAAPLMKDGGTMFAMSYYGANRVVPNY
                     NVMGPVKAALEAACRYLAFELGPRGIRVHAISPGPLKTRAASGLKDFELLLNEAAHKA
                     PLGELVDIMDVGWACAYLATSFAHRITGGTVYVDGGVNVIA"
     gene            complement(3318..>4686)
                     /locus_tag="VF991_02785"
     CDS             complement(3318..>4686)
                     /locus_tag="VF991_02785"
                     /inference="COORDINATES: protein motif:HMM:NF022783.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3141 domain-containing protein"
                     /protein_id="HEX9555391.1"
                     /translation="FETWWGSPVLLNAGEMQWIADNLFVGNKLTSGEIRTSDGVRVDL
                     RNIKSPIIVLCSWGDNITPPQQALGWITDLYGHEDEIVTNGQTIVYTLHQTIGHLGIF
                     VSGKVATKEHAEFASCMEMIDAMPPGLYEAVISEVEPGTEHPDLIHGKYLFRLEARTL
                     ADIRALGANSDEDNQRFAAVARLSEINHGLYRTLAQPLVRAMATEQTAELSRHMHPHR
                     LRFEIFSDKNPLMQPVKGLAEAVRAERRPLARDNPLLTLEQVASTWITTWWESLKQAR
                     DAMTEATFLGMYGSPLLQAMVGLGTQSAPAERRIARDVACEANEARMRADLERRFEVG
                     GLREAAIRGILYVRMPERSFDERAFAMLQAIRAMQPMNDRVSMTELKACLKEQYLLVR
                     LDEERAVRAIPKLLPDDEHARRFGLDALHRMVEARGALTEEGKRRLSRVESLFSAQPS
                     ETAHA"
BASE COUNT          749 a         1512 c         1604 g          821 t
ORIGIN      
        1 caacgctggg cagagccggt gtaagttggc gacctctcgc tggggatcac gaagagatcg
       61 tctcgcagga tgcgctccag ctgctttgtt cccaactcca cgttgccgtg gtcgcagtct
      121 gactgggcca gctcggcctg cacccaggtg ccgtcgtgat ggtagtagtt ggcatggtat
      181 ttccaataga ggccatggag ccgcgtgcaa taggcgaggt cttcaggtgc ttcctgtcgg
      241 gctctggcgt cgcctgacac ggcgatcagg cagcacgcga gcgcgatggc cccaaatccg
      301 agtcgcaaca tagttcccgg cgcttcgtgg gcgagcagcc ccgtggcgct gcctttggtc
      361 gtagtccgtg tgtgagacat gatgtgctcc tgatgcgggt ggtgaagagt cttcggatgg
      421 ccagtcaaga tgagctggct tgcccgcatc ctgagcgcgt gcgtccgtca tgtatttgat
      481 gaggacgctg tcgtttgatc atccagggca tcgagtgcac gcgaaaccac aagtgcatca
      541 cttgtcatgc gccaggtaag cagcgcaaac cgcgatccgg gctcgcacac ctttgaagga
      601 tcgcaatcga cctttgtgat cgacggaaga agctcgagta acgcgcgaac accgcccggg
      661 ccgcgctgtg gtccggacaa tggcgcgctg cccgctgctc tacggcttag ggaatcgcta
      721 tcggcagagc ttctactggc acaccggcga aagggggccg ggttggcctg ggctcgcagg
      781 caaccgaccg cggctcagcg ccaacggccg acgcggcaat gtcattggtg accggtgaat
      841 tcggttggcc agctcagcgt gatgccgaca tcgcctggca taccgttcgg atagtcgatg
      901 atctcgaaac ggaggtggta gcccttgggc ttgagttggc gctgccataa ctcgtagagc
      961 tgcttgggct cgccgaccag cgtcttctcc caaccgggct cggcctggtt gacggcgcgt
     1021 ccgttgtcgg tgcagagcgt gtggggaaaa cggaagacct ggaccgacgt ctggccgctc
     1081 tcgaccgctc gattgatgag gatcgccgcc ttttcaagca gctcgtcgtc cgacagcccg
     1141 acgggctggc ggagcttctc gagcagcgcc ttcttagtct tctcctcggc agcgtgcgcc
     1201 ttctcggcag ccaacgcctt ctgcttctgc tcctcggcga ccttcgccgc cagttccttt
     1261 gcactcagta tggttgtggt catgctgctt ctccagtcgc tttcgccata accagcgccg
     1321 attcggccgg ccgctgcgtg acttggggtc ggggggcgag cagggcatag gtattgcgcg
     1381 cgatcgtgcg ctcttcgtcg gtcggcacga cccacgccga cacgcgcgag cccgctgcgc
     1441 tgatgcggcc ctcgccgtgg gcattgcgcg tggcgtcgag cttgacgccc agccaggcgc
     1501 agccagcaac aacctccgcc cgggtcagcg catcatgctc gccgatgccg gcggtgaaga
     1561 ccagcgcgtc gatacctccc agggcggcca ccatggagcc gatctcgcgc acgatgcgat
     1621 agacgaacag gtcgatcgct tcgcgcgcct cgggcgcttt cgattggcgc aaggtgcgca
     1681 tgtccggcga gatgccggag acgccgagca ggcccgaccg gcgatagatc aggtcctcga
     1741 tggccttggc gtcgagcccg cgctcctgca tcagatagag cagcacgccg gggtcgatcg
     1801 ccccgcaacg cgtgcccatc atcaggccat cgaccgcggt gaagcccatg gtgctggcga
     1861 cgctgcggcc attggcgaca gcgcacaggc tggcgccgtt gccgagatgg gcgatcacca
     1921 gccgcgacct cgccagcgcc gggtcgatct cgtgaagccg ggttacgatg aaatcgtagg
     1981 acaggccgtg gaagccgtag cggcgcacgc cggccgccgt gagttcacgc ggcaggccga
     2041 actcctgggc gacggccggc tgagagcgat ggaaggccgt gtcgaagcac gccacctgcg
     2101 gcaggtccgg ttggctgccc gcaacggcct cgatgggcgc gagattgtgc ggctgatgca
     2161 ggggtgcaag cggcacgagt ttcttgagca gggccatgac gccctgatcg atgcgcaccg
     2221 gtccagcgaa ctcggtgccg ccatgcacca cccgatggcc gacgccgagc accggccggc
     2281 cggccagcag ctcgcggccg agcgtcagga tctcggccgt cgcgcggtgg tggtcgagct
     2341 cggccctcgc ccagcgtcgc tccgccaccg tggcccccgc caggttccgg gcttccaggt
     2401 gcgggtcgac gccgatgcct tcgacctgtc cgcgaaacag caacagcccg tcgcgaccgg
     2461 cctcatagag ggcgaacttg atgctcgagg acccggcatt gaggacagcg acgcaactct
     2521 gtgcagcgga catggttcga tcctttcagg caatgacgtt gacgccgccg tcgacataga
     2581 cggtgccgcc ggtgattcga tgagcgaagg acgtggcgag gtaggcgcac gcccacccga
     2641 cgtccatgat gtcgaccagc tcgcccagcg gcgccttgtg cgccgcttcg ttcagcaaca
     2701 gctcgaaatc cttgagcccg gaagcggcgc gcgtcttgag cgggccgggc gagatggcgt
     2761 gcacgcgaat gccgcgcggt ccgagctcga aggcgaggta gcggcaggcg gcttcgagcg
     2821 ccgccttcac cggccccatg acgttgtagt tcggcacgac cctgttggcg ccgtagtagc
     2881 tcatggcgaa catggtgccg ccgtccttca tcagcggcgc cgccagccgc gccatgcgga
     2941 tgaaggaatg gcaggagaca tccatcgccg tggcgaagcc ttcggccgag cagtccaaca
     3001 ggccgccccg cagatcggca agcggcgcga aggcgatgga gtgaaccagg atgtcgaggc
     3061 ggccccaacg cccggcgatg tcgccgaaca gtgcctcgag ttggcccggt cgggcgacgt
     3121 cgaggcctgt cgtgatctcg gcctcgagct cgcgcgccag cggctcgaca tgcgggcggg
     3181 ccttgtcgtt cagccaggtg atggcgagat cggcgccggc ggcgcggaag gccttggcgc
     3241 agccataggc gatcgactgg tcgttggcga tgcccacgat cagcgccttt ttgccagcca
     3301 gcaccgggat ggcgatgtca ggcatgcgcc gtctctgaag gctgggcgct gaacagactc
     3361 tcgacgcggc tcagccgccg tttgccttcc tcggtgagcg cgccgcgggc ctccaccatg
     3421 cggtgcagcg cgtcgagccc gaagcgccgg gcatgctcgt cgtcgggcag cagcttggga
     3481 atggcccgca cggcgcgttc ttcgtccagg cggaccagca ggtactgctc cttcaggcag
     3541 gccttcagct ccgtcatgct cacccggtcg ttcatcggct gcatggcccg gatcgcttgc
     3601 agcatggcga aggcccgttc gtcgaagctg cgctcgggca tgcgcacgta gaggatcccg
     3661 cggatcgccg cctcgcgcag gccaccgact tcaaagcgcc gctcgaggtc ggcccgcatc
     3721 ctggcctcgt tggcctcgca ggcgacgtcg cgggcgatgc gccgctcggc aggtgcgctc
     3781 tgcgtgccca acccgaccat ggcctgcagc agcggcgagc cgtacatgcc gaggaaggtc
     3841 gcctcggtca tggcgtcgcg cgcctgctta agactctccc accaggtcgt gatccaggtc
     3901 gaggcgacct gctcgagcgt cagcagggga ttgtcgcggg cgagcggcct gcgctcggca
     3961 cgcaccgctt cggccaggcc cttgaccggc tgcatcagcg gatttttgtc ggagaagatc
     4021 tcgaagcgca gccgatgcgg atgcatatgg cgcgacagct cggccgtttg ctcggtggcc
     4081 atcgcgcgca ccaggggctg ggcgagcgta cggtagaggc cgtgattgat ctccgacagg
     4141 cgggcaaccg cggcgaagcg ctggttgtcc tcgtcgctgt tggcgccgag cgcgcggatg
     4201 tcggcgaggg tccgggcttc caggcggaac agatacttgc cgtggatgag atcgggatgc
     4261 tcggtgcccg gctcgacctc gctgatcacc gcctcgtaga ggccgggcgg catggcgtcg
     4321 atcatttcca tgcaggaggc aaactcggcg tgttccttgg tcgccacctt gcccgagacg
     4381 aagatgccga gatggccgat cgtctggtgc agcgtgtaga cgatggtctg tccgttggtg
     4441 acgatctcgt cctcgtggcc gtagaggtcg gtgatccatc ccaaggcctg ctgcggcggg
     4501 gtgatgttgt cgccccacga gcacagcacg atgatcggcg acttgatgtt gcgcaggtcg
     4561 acgcgcacgc cgtcggaggt gcggatctcg cccgaggtga gcttgttgcc gacgaacagg
     4621 ttgtcggcga tccactgcat ctcgccggcg ttcagcagca ccggactgcc ccaccaggtc
     4681 tcgaag
//
LOCUS       DASWGA010000117         7292 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_520475, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000117 DASWGA010000000
VERSION     DASWGA010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7292
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520475"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(229..1410)
                     /locus_tag="VF991_02790"
     CDS             complement(229..1410)
                     /locus_tag="VF991_02790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX9555392.1"
                     /translation="MFVNFFLELRQAKVPVSIKEYLALMEAMDKHVADYSVDNFYYLS
                     RSVLVKDERNLDKFDRVFGHVFKGLEALPPEGATAEIPEEWLRKLAEKLLTDEEKAQI
                     EAMGGWEKLMETLKKRLEEQQKRHQGGSKWIGTAGTSPFGAYGFNPEGVRIGQDKNRE
                     GRAVKVWDKREYKNLDDTVEIGTRNIKLALRRLRKFAREGAEVELDMPDTIRSTARNA
                     GYLDIKMIPERRNKVKLLLLFDIGGSMDAHIRVCEELFSAARTEFKHLEFFYFHNCLY
                     EKLWKDNRRRHVDTFSTAELLHTYPPDYKVIFVGDASMSPYEIAYPGGSVEHWNEEAG
                     QVWIQRVADTYRSVAWLNPVPERHWSYTPSIQLLQQLSSSRMFPLTLGGLDSAMKELN
                     K"
     gene            complement(1430..2278)
                     /locus_tag="VF991_02795"
     CDS             complement(1430..2278)
                     /locus_tag="VF991_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX9555393.1"
                     /translation="MKFTGTDSYVASDDLRVAVNAAIALQRPLLIKGEPGTGKTVLAH
                     EVARAIGAPLIEWHIKSTTKAQQGLYEYDAVSRLRDSQLGDERVKDIKQYIKRGKLWD
                     AFTAPERPVLLIDEIDKADIEFPNDLLLELDRMEFYVYETQEVVKAVQRPVVMITSNN
                     EKELPDAFLRRCFFHYIRFPDREIMTQIVDVHFPELQRNLLREALNIFYDIREVPGLK
                     KKPSTSELLDWLKLLMVEDMSPDALRSKDSKQLIPPLHGALLKNEQDVHLFERLAFMA
                     RREQRQ"
     gene            complement(2355..3050)
                     /locus_tag="VF991_02800"
     CDS             complement(2355..3050)
                     /locus_tag="VF991_02800"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX9555394.1"
                     /translation="MAEKTDKIRVWDLPVRLFHWTLVVLLTVSYFTGRAGGEWMKFHF
                     WSGYAILTLVLFRIAWGLVGSTTARFSHFVKGPAACLGYLKDLLLGRRTFDIGHNPVG
                     GAMVMVLLFAVLAQAAAGLFSADTDMGTVNGPLANLIADKSVDRFTHFHKFWVNVLLI
                     LAGLHVLAAIFYLVWKRQNLIGAMFTGRRRLDDVVASGEPRPSLTFASGRLALSLLVV
                     AAAIVYVIVRVGG"
     gene            3207..3662
                     /locus_tag="VF991_02805"
     CDS             3207..3662
                     /locus_tag="VF991_02805"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX9555395.1"
                     /translation="MRKTLVVAVIGALAAGAMVSGVTIAWAQADVIKARQDDRKQAAA
                     AMRAIKGIIDAKGPTAGAVEQAAKLKQLQVAFEKMFPPGSDKGETKALPTVWSDWAGF
                     QAASKNADAAYDKIAVAAGSGDMAALTAAFGDAGKACGACHDKFRAKAN"
     gene            complement(3850..4446)
                     /locus_tag="VF991_02810"
     CDS             complement(3850..4446)
                     /locus_tag="VF991_02810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9555396.1"
                     /translation="MRGLRTRQALIQATLDLIQAGDVEPTSAAIATIAGVSSRALFQH
                     FTSLADLYAAAFDLAVSRAFERNGPIDGAAPLSNRIDLLVSDRAQLFEEWLPVWHFAE
                     RVRSVAPAVGLGVAQLRKLLRERLTVWFATELSNLNPGSRNLVLDSLDVAFGLDSWMN
                     MREQLRLSPVHASRTWRFTAEAIVLQALTVPNQPVAVA"
     gene            5423..5890
                     /locus_tag="VF991_02815"
     CDS             5423..5890
                     /locus_tag="VF991_02815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555397.1"
                     /translation="MSLGAIAAFTVLADPATAGIEEGVKAMQAGDVATAEKELQVLVK
                     ERDPRAQFLVGLFIYGNPESKLYDPNKATPLLLDAAERGYLPAMMPLAGAYAEGKGVP
                     KSAFEAYKWIAIAERWNSPPPPPDQVAKLTGELKPDEIEKAKAAALAYSFKTK"
     gene            5887..7101
                     /locus_tag="VF991_02820"
     CDS             5887..7101
                     /locus_tag="VF991_02820"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9555398.1"
                     /translation="MIALRVALLAVLLAAAGVARGQQDAAADVAPVLRPAVAAYRAGD
                     LGTAEAAFRSLAPGNADAAAWLGAVLLDRGADREGLRLIQQSADAGSPEGAHRLALVY
                     AQGSAGTPRNDAKAVELFEKAATAGHARAQLNLGILYLRGQGAAADLIQARAWLEKAA
                     ASGDPQALYTLGRALSESGGQAVADPVRAADLYRRAAEKGHVLAGLRYGLALSEGSGI
                     KRDTVAAQRWLVQAQESGVPEAALALGDMAARTPASRDKAANEKVVKAALSWYEVAAH
                     GGVPSAQFKLANAYFAGVGVPRDPAQALLWYSRAAQQGLPQAQHALGIMLMGGVAGPS
                     DPVEGYKWLVLAERGGNVDSRTVREKAAEQLAEADRRRAEALAQTFKPTLERPIDEAP
                     TRLVPSRTPSNR"
     gene            7109..>7292
                     /locus_tag="VF991_02825"
     CDS             7109..>7292
                     /locus_tag="VF991_02825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcB family DNA repair protein"
                     /protein_id="HEX9555399.1"
                     /translation="MSMPSAAPQARPEITVAVCRGACRLMRQAGHSVLREVPLPDGRR
                     ADIFAVGRGGEITIVEV"
BASE COUNT         1346 a         2256 c         2382 g         1308 t
ORIGIN      
        1 ctggcggacg atgatgggac ggatgtcgac cgcggcgcag gcctcgatca gatgattgac
       61 cggataggcg aagagatact cgacgccttc cttcttgaga atgtcggcga tcgccgggcc
      121 ggtcttcatt ttgtttcctc ctctacactg tcgtcctgag cgcagcgaag gacctcatcg
      181 ccgcttgcaa tcggcatgag atccttcgct gcgctcagga tgacagcatc acttgttcag
      241 ctccttcata gcactatcga ggccgcccaa ggtcagcgga aacatgcggc tgcttgaaag
      301 ctgctggaga agctggatcg acggcgtgta gctccagtgc cgctcgggca ccgggttgag
      361 ccacgccacg ctgcgatagg tgtcggccac gcgctggatc cagacctggc ccgcctcttc
      421 gttccaatgc tccaccgaac cgccgggata ggcgatctcg taggggctca tcgaggcgtc
      481 accgacgaag atcaccttgt agtcgggcgg ataggtgtgc aggagctcgg ccgtcgagaa
      541 ggtgtcgacg tggcgccggc gattgtcctt ccacagcttc tcgtagaggc aattgtggaa
      601 gtagaagaat tcgagatgct tgaactcggt gcgcgccgcc gagaacagct cctcacagac
      661 gcggatatgg gcatccatcg agccgccgat atcgaacagc agcagcagct tcaccttgtt
      721 gcgccgctcc gggatcattt tgatgtcgag atagcccgca ttgcgcgccg tcgagcggat
      781 ggtgtcgggc atgtcgagct cgacctcggc gccctcgcgc gcgaacttgc gcagccggcg
      841 cagggcgagc ttgatgttgc gcgtgccgat ctcgaccgtg tcgtcgaggt tcttgtactc
      901 gcgcttgtcc cacaccttga cggcgcggcc ctcgcgattc ttgtcctggc cgatgcgcac
      961 gccttccgga ttgaagccat aggcgccgaa cggcgaggta cccgccgtgc cgatccactt
     1021 gctgccgccc tggtgacgct tctgctgctc ttctagacgc ttcttcagcg tctccatcag
     1081 cttctcccag ccgcccatcg cctcgatctg cgccttctcc tcgtcggtca gcagcttttc
     1141 ggcgagcttg cgcagccatt cctcggggat ctcggccgtc gcgccctcgg gcggcagcgc
     1201 ctcgaggccc ttgaagacgt ggccgaagac gcggtcgaac ttgtcgaggt tgcgctcgtc
     1261 cttcaccagc acggagcgcg agagatagta gaaattgtcg acgctgtagt cggcaacgtg
     1321 cttgtccatg gcttccatca gcgccaggta ctccttgatg gagaccggca ccttggcctg
     1381 acgaagttcc aggaagaagt tcacgaacat cgggggattc cccttcgtgc tactggcgct
     1441 gctcccgacg cgccatgaag gcaagacgct cgaagagatg gacgtcctgc tcgttcttga
     1501 gcagggcgcc gtgcagcggc gggatgagtt gcttggaatc cttggagcgc aatgcgtcgg
     1561 gcgacatgtc ctcgaccatc aggagtttca gccagtcgag cagctccgac gtcgagggct
     1621 tcttcttgag gccgggcacc tcacggatgt cgtagaagat gttgagcgcc tcgcgcagca
     1681 ggttgcgctg cagctcgggg aaatggacat cgacgatctg ggtcatgatc tcgcggtcgg
     1741 ggaagcggat gtaatggaag aagcagcggc gcaggaaggc gtcgggcagc tccttctcgt
     1801 tgttggaggt gatcatcacc accggccgct ggacggcctt cacgacctcc tgggtctcat
     1861 agacgtagaa ctccatgcga tcgagctcga gcagcaggtc attgggaaac tcgatgtcgg
     1921 ccttgtcgat ctcgtcgatc agcagcaccg gccgctcggg cgccgtgaag gcgtcccaca
     1981 gcttgccgcg cttgatgtat tgcttgatgt ccttgacccg ctcgtcgccc agctggctgt
     2041 cgcgcaggcg ggagacggcg tcgtactcgt agaggccctg ctgggccttg gtggtcgact
     2101 tgatgtgcca ttcgatcagc ggcgcgccga tggcgcgggc gacctcgtgg gccagcacgg
     2161 tcttgccggt gccgggctcg cccttgatca gcaacggccg ctggagcgcg atggctgcat
     2221 tcaccgccac gcgcaggtcg tcgctggcaa cataggagtc ggtaccggta aatttcatga
     2281 tgcaaaatcc aggttcacgg gagtgaaatc accctagtgg cgggccttcc cgccagcaag
     2341 gccgcggccg caggtcagcc gcccacgcgc acgatgacgt agacaatggc ggcggcaacg
     2401 accagcagcg acagggcgag ccgccccgaa gcgaaagtca ggctgggtcg gggctcgccc
     2461 gaagccacga catcgtcgag ccgtcggcgg cccgtgaaca tggcgccgat caggttctgg
     2521 cgtttccaga ccaggtagaa gatcgccgcc agcacgtgca ggccggccag gatcaagagc
     2581 acgttcaccc agaacttgtg gaagtgcgtg aagcggtcga ccgatttgtc ggcgatcagg
     2641 ttggccagcg ggccgttgac cgtgcccatg tcggtgtcgg ccgagaacag gccggccgcg
     2701 gcttgggcga gcacggcgaa cagcaggacc atgaccatgg cgccgcccac tggattgtgg
     2761 ccgatgtcga aggtgcgccg accgagcagc aggtccttca gatagccaag acaggccgcc
     2821 gggcctttga cgaagtgcga aaaccgcgcc gtcgtgctgc cgaccaagcc ccaggcgatg
     2881 cggaacagca ctagggtgag gattgcgtag cctgaccaga aatgaaactt catccactcg
     2941 ccgcccgccc gccccgtgaa atacgacacg gtcagcagaa cgacgagcgt ccaatggaat
     3001 agtcggaccg ggaggtccca aacgcggatc ttgtcggtct tctcggccat ccagtctttc
     3061 tcccctgcgc agaacgtcag cacacgcagt cgtgatgaag tttagcagtc tgtcttgttc
     3121 gctttagcgc gaacctctgc aacaaatacc ctgccgacgg caaaaaaatg cccgtcggca
     3181 gggatcaatt tcaacggggg agctgcatga gaaagactct ggttgtagcg gtgatcggtg
     3241 cgcttgccgc tggcgcgatg gtgagtggag tgacgatcgc ctgggcacag gccgacgtga
     3301 tcaaggcacg ccaggacgat cgcaagcaag ccgccgccgc catgcgggcg atcaagggca
     3361 tcatcgacgc caagggtccc accgcgggcg cggtcgagca ggccgccaag ctcaagcagc
     3421 tccaagtggc ttttgagaag atgtttccgc ccggctccga caagggcgag accaaggcgt
     3481 tgccgacagt gtggtcggat tgggcaggct tccaggccgc cagcaagaac gccgacgcgg
     3541 cctatgacaa gatcgcggtg gcggcgggat cgggcgacat ggcggcgctg accgcggcgt
     3601 tcggcgatgc cggcaaggcg tgcggcgcct gccacgacaa gttccgagcc aaagccaact
     3661 gattccagtc gacgtcgaag accaggcgac ggcattgccg tcgccttttt cgttgccact
     3721 tccgctgccg gcaaaggaaa ggccggtcgc ttggggaacg accggccttc tggggtgccc
     3781 gtggctgggg tgggtactga agacgaagcc ttatggggtg tgggaaggga ggcttcgtct
     3841 ggtggctggt taggccaccg ccacgggctg gttgggaacg gtgagcgcct gcaggacaat
     3901 cgcctcggcg gtgaagcgcc aggtgcgcga cgcgtggacc ggcgacaagc gcagctgctc
     3961 gcgcatattc atccagctat cgagtccgaa cgcgacatcg agcgagtcga gaacgagatt
     4021 gcgcgaaccg ggattgagat tgctgagctc ggtcgcgaac cagacggtca ggcgctcgcg
     4081 cagaagcttg cggagctggg cgacgcccag accaaccgcc ggcgcgacgc tgcggacgcg
     4141 ctcggcgaag tgccataccg gcagccattc ctcgaacaac tgagcgcggt cggagaccag
     4201 caaatcgatg cgattggaaa gcggcgcggc gccgtcgatc ggaccgttgc gctcgaaggc
     4261 gcggctgacc gcgaggtcga acgcggcggc gtagagatcg gcaagactgg tgaaatgctg
     4321 aaacagagct cggctcgaaa cgcccgcgat ggtggcgatg gccgccgatg tcggctcgac
     4381 gtcgcccgcc tggatgagat ccagcgttgc ctggatgagc gcctgacggg tccgcagacc
     4441 acgcacgatc cggccgtctt gcgaacgcga aatatcgact gggaatccga taattttcat
     4501 attgaaacca atggaatatg aattgcttta atgtcaccac tttaacacag ggcaggaacg
     4561 acgtaacttg caagaatgca tatctcggcc cacacgatcc ccgattttgt tacatttctt
     4621 tttccgagat aggcgttttt ggggtatctg accttgcgct tggcctgcaa tcatcatggc
     4681 tatccaccgc catttccagc gctttttcca gattctccgc atcgatcaat gccgcaagcc
     4741 ggcgagccga tcgaataatc acggccagaa atacgaaagg ccggccgctt ggggaacgac
     4801 cggccttcct taggagcccg cctgggcgtg gggttatcga agccttgggg tgtgtgggaa
     4861 ggggcttcga tgagcggctt gggaggccgc cggcgggcta tttggatctg tgaacgcagg
     4921 gcgcgctggt tgaaagcgct gccaattccg gagttttaaa tgcctttcag ctatgactta
     4981 caattactgc agaacgtctc ttatggcgcg aacttaacaa atggagccgg ctcgcgtcag
     5041 ttgcaaaatt gcatatctgg ttccggagca acccgccatt ttgctgggat ttcctgcatg
     5101 ttgccgatag cagatagtcg aaaatggggg tgcagactcc ccgtcgtttc cgagatttgt
     5161 tattgaattc caaggggttg agttgccaca cggcgaaaga atctatcaat tcaactgcaa
     5221 attgactgaa aattgcaagc cagcggcctg ctccgacaga agaaatcggc gcgcccgttg
     5281 tcgaccgccc aggctcccta tcggctttgg ccgcaattcc atggtagacg agccgccatc
     5341 cagccagcac tggtttcgcg ccggcctgtc atttggggag tattgattcg tgcgattcgt
     5401 ccgttcatgc cgaactctgc tcatgtcgct cggcgccatc gctgctttca cggttctcgc
     5461 cgacccggcg accgccggaa ttgaagaagg cgtcaaggca atgcaggccg gcgacgtcgc
     5521 gacggcggaa aaggaactac aggtcctggt caaggaacgc gatccgcggg cgcagttcct
     5581 tgtcggcctt ttcatctacg gaaatcccga gtcgaagttg tacgacccca acaaggcaac
     5641 gccgctgctg ctcgatgccg ccgaacgcgg ctacttgccg gcgatgatgc cgctggccgg
     5701 cgcttatgcc gaaggcaaag gcgtgccgaa gagcgccttc gaggcctaca agtggatcgc
     5761 catcgccgaa cgttggaatt caccgccacc gccacccgac caggtcgcca agttgaccgg
     5821 cgagctgaag cccgacgaga tcgaaaaggc caaggcggcg gcactggctt atagcttcaa
     5881 gaccaaatga tcgcgctgcg ggtggcgctg ctcgcggtat tgcttgccgc ggccggcgtc
     5941 gcgcgcggac aacaggacgc ggctgccgac gtggcgccgg tcttgcgccc cgccgtcgcc
     6001 gcctatcgcg ccggcgatct tggcactgcc gaggcggcct tccgctcgct ggcgcccggc
     6061 aatgccgatg ccgcggcgtg gctcggcgcg gtgctgctcg atcgcggcgc cgatcgagag
     6121 ggactgcgcc tgatccaaca gtcggcggat gccggctccc ccgaaggcgc acaccggctg
     6181 gccttggttt atgcgcaagg gtcggcgggc acgccgcgca acgatgccaa agccgtcgag
     6241 ctcttcgaga aggccgccac cgccggccat gcccgcgcgc agctcaatct cgggatcctt
     6301 tatctacgtg gccagggcgc tgccgccgat ctcatccagg cgcgcgcctg gctcgagaag
     6361 gccgcagcca gcggcgatcc tcaggcgctc tatacgcttg gccgcgccct gtcggagagc
     6421 ggaggacagg ccgtcgccga tcctgtgcgt gctgccgacc tttatcggcg ggccgccgaa
     6481 aaaggccatg tcctcgccgg actgcgctac ggcctggcgt tgagcgaagg cagcggcatc
     6541 aagcgcgata ctgtcgccgc gcagcgctgg ctggtccagg cgcaggaaag cggcgttccc
     6601 gaagcggcgc tggcgttggg cgacatggcc gcgcgcacgc ccgcctcgcg cgacaaggcg
     6661 gccaacgaga aggtcgtgaa ggcagcgctc agctggtacg aggttgccgc gcacggcggc
     6721 gtgccgtcgg cgcagttcaa actcgccaat gcctacttcg ccggcgtcgg cgtgccgcgc
     6781 gatccggcgc aggccctgct ctggtacagc cgcgcggccc agcagggctt gccgcaggcc
     6841 cagcatgcgc tgggcatcat gctgatgggc ggcgttgccg gcccgagcga tccggtcgaa
     6901 ggctacaagt ggctggtgct tgccgagcgc ggcggcaacg tcgactcgcg gacggttcgc
     6961 gaaaaggccg ccgagcagct cgccgaggcc gaccgccggc gcgccgaggc gctggcgcag
     7021 accttcaagc ctacgctcga gcgcccgatc gacgaggcgc cgacgcggct cgttccgtcg
     7081 cgcacgccgt caaaccgcta agcttgccat gagcatgccg tccgccgcgc cacaggcgcg
     7141 ccccgaaatc accgttgccg tatgccgcgg cgcctgccgg ctgatgcggc aggccggcca
     7201 ctccgtgctg cgcgaagtgc cgctgcctga cggcaggcga gccgacatct tcgccgtcgg
     7261 ccgcggcggg gagatcacga tcgtcgaggt ga
//
LOCUS       DASWGA010000118         3242 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1278727, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000118 DASWGA010000000
VERSION     DASWGA010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1278727"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1860
                     /locus_tag="VF991_02830"
     CDS             <1..1860
                     /locus_tag="VF991_02830"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX9555400.1"
                     /translation="DVIATMENSPKIVVAALHGTPLGGGLETALGAHYRVSLPSTRVG
                     LPEVHLGLLPGAGGTQRLPRLTGAKYALDAILSGRHIPAPEAKSKGIIDAIVEGDLLA
                     GAVTHAQMLVAQKAPRRRIRDLKATLESPDLFKETEKAIARRARGFKAPWSIIKCVHA
                     AVELPFDEGMKRERELFLELLTSPESAAQRYYFFAEREAAKVLDVPADTPQREIKKAG
                     IVGAGTMGGGIAMNFANAGIPVTLLEVKQEALDRGLKTIRTNYENTAKRGGMKAEDVD
                     KRMALIKPTLSYDDLKDSDVVIEAVFETMEVKEGVFKKLDEVAKPGAVLATNTSGLDV
                     NQIANYTERPGDVIGMHFFSPANVMKLLENVRGKATQKDVIATVMSLSKKIGKIPVLV
                     GVCEGFVGNRMLRQRGIQSAYMLEEGALPQQIDKVIYDFGFPMGPFAMSDLAGNDVGW
                     RIRQGKKEKEQRNVRYTGYIADAICELGRFGQKTGAGYFKYNLPDRTPIPDPEVEKII
                     EQTSKKLGITRRAISDQEILERCLYPMVNEGAKILQEKMAQRSLDIDVIWVNGYGWPV
                     YRGGPMWWADNVVGLKTIHDALLKYRDASGDPFWEPAPLLKKLVQEDKKFSTV"
     gene            1998..3188
                     /locus_tag="VF991_02835"
     CDS             1998..3188
                     /locus_tag="VF991_02835"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEX9555401.1"
                     /translation="MADAVIVSTARTPIGKAFRGIFNDTHGADMGAHVIKHAAERAKV
                     ELAEVEDVILGCAAPEGTTGSNVARVSAMRAGAPVSVSGVTVNRFCSSGLQTISMAAQ
                     RVLVDKVPVMIAGGLESVSLVQGPPGGNKNRLVNPWVQEHVPGIYHSMIQTADTVAAR
                     YKISRQAQDEYSLQSQMRTAAGQQAGKFDDEIVPMETTMLVTDKNTQEVSKKTVKLTK
                     DEGNRPDTNLEGLSKLQPVMGPDKWITAGNASQLSDGASAAVIMSDAEAAKRGLKPLG
                     IYKGLVVAGCEPDEMGIGPVYAIPKLLKRFGLKMDDIDLWELNEAFAVQVVYCRDRLG
                     IDPNKLNVNGGAIAIGHPFGMTGARCTGHALIEGRRRKAKNVVVTMCIGGGMGAAGLF
                     EVVH"
BASE COUNT          640 a         1079 c         1045 g          478 t
ORIGIN      
        1 gacgtcatcg ccaccatgga gaatagcccg aagatcgtcg tggcggccct gcacggcacg
       61 ccgctgggcg gcggcctcga gacggcgctg ggcgcgcact accgcgtgtc gctgccctcc
      121 acccgcgtgg gcctgccgga agtgcatctc ggcctgctgc cgggcgccgg cggcacccag
      181 cgcctgccgc gcctcaccgg cgccaagtac gcgctcgacg ccatcctctc gggccgccac
      241 atccccgcgc ccgaggccaa gagcaagggc atcatcgacg ccatcgtcga gggcgacctt
      301 ctggccggcg cggtgacgca tgcccagatg ctggtggcgc aaaaggctcc gcggcggcgc
      361 atccgcgacc tcaaagcgac gctcgaatcg cccgacctgt tcaaggagac cgagaaggcg
      421 atcgcccggc gcgcccgcgg cttcaaggcg ccatggagca tcatcaagtg cgtgcacgcc
      481 gccgtcgagc tgccgttcga cgagggcatg aagcgcgagc gcgagctgtt cctggaactg
      541 ctgacctcgc ctgaatcggc ggcgcagcgc tactacttct tcgccgagcg cgaggcagcc
      601 aaggtgctcg acgtgccagc cgacacgccg cagcgcgaga tcaagaaagc cggcatcgtc
      661 ggcgccggca ccatgggcgg cggcatcgcc atgaactttg ccaatgccgg cattccggtg
      721 acgctccttg aagtgaagca ggaggcgctg gaccgcgggc ttaagacgat ccgcaccaac
      781 tacgagaaca ccgccaagcg cggcggcatg aaggccgagg acgtcgacaa gcgcatggcg
      841 ctgatcaagc ccacgctctc gtacgacgat ctcaaggact ccgacgtcgt catcgaagcg
      901 gtcttcgaga ccatggaagt caaggaaggc gtgttcaaga agctcgacga ggtcgccaag
      961 ccgggtgccg tgctggcgac caacacgtcg ggtctcgacg tcaaccagat cgccaactac
     1021 accgagcggc caggcgacgt cataggcatg cacttcttct cgccggccaa cgtcatgaag
     1081 ctcttggaga acgtgcgcgg caaggcgacc cagaaggacg tcatcgccac cgtgatgtcg
     1141 ctctccaaga agatcggcaa gatccccgtg ctggtcggcg tctgcgaggg cttcgtcggc
     1201 aaccgcatgc tgcgccagcg cggcatccag tcggcctaca tgctggagga aggcgccctg
     1261 ccgcagcaga tcgacaaggt gatctacgat ttcggcttcc cgatgggccc cttcgccatg
     1321 agcgacctcg ccggcaacga tgtgggctgg cgcatccgcc agggcaaaaa ggagaaggag
     1381 cagcgcaacg tccgctacac cggctatatc gccgacgcga tctgcgagct cggccgcttc
     1441 ggccagaaga ccggcgcggg ctacttcaag tacaacctgc ccgaccgcac gccgatcccc
     1501 gaccccgagg tcgagaagat catcgagcaa acctcgaaga agctcggcat cacgcgccgc
     1561 gccatctccg accaggagat cctcgagcgc tgcctctatc ccatggtcaa cgagggtgcc
     1621 aagatccttc aggagaagat ggcccagcgc tcgctcgaca tcgacgtgat ctgggtcaac
     1681 ggctacggct ggccggtcta tcgcggcggc ccgatgtggt gggccgacaa cgtggtggga
     1741 ctgaagacca tccacgacgc cttgctgaaa taccgcgacg cttccggcga cccgttctgg
     1801 gagccggcgc cgctgctcaa gaagctggtg caggaggaca agaaattctc taccgtctga
     1861 tatgacacga ggtgtcatcc cgagcgtagc gagggacctt taaggcaaca ggaaaggtcc
     1921 ctcgctacgc tcgggatgac agttatcgga aatcaacgcc gtgccacctg ggcggcaaat
     1981 ctaaggagga aatccccatg gccgacgccg tcatcgtctc caccgcccgc acgccgatcg
     2041 gcaaggcgtt ccgcggcatc ttcaacgaca cccacggcgc cgacatgggc gcgcatgtca
     2101 tcaagcatgc cgccgagcgc gccaaggtcg agctggccga agtcgaggac gtgatcctgg
     2161 gctgcgccgc ccccgagggc acgactggct ccaacgtggc gcgcgtctcg gcgatgcgcg
     2221 ctggcgcgcc ggtcagcgtg tcgggggtca cggtcaaccg cttctgctcg tcgggtctgc
     2281 agaccatctc gatggccgcc cagcgcgtgc ttgtagacaa ggtgccggtg atgatcgcgg
     2341 gcgggctcga atcggtgtcg ctggtgcagg gtccgccggg cggcaacaag aaccgcctgg
     2401 tcaatccctg ggtccaggag cacgtgccgg gcatttacca ctcgatgatc cagaccgccg
     2461 acacggtggc ggcgcgctac aagatcagcc gccaggcgca agacgaatat tctctgcaga
     2521 gccagatgcg caccgcggcg ggccagcagg ccggcaagtt cgacgacgag atcgtgccga
     2581 tggaaaccac gatgctggtc accgacaaga acacccagga ggtctcgaaa aagacggtga
     2641 agctcaccaa ggacgagggc aaccggcccg acaccaacct ggaaggcctt tccaagctgc
     2701 agccggtgat gggccccgac aagtggatca ccgccggcaa cgcgagccag ctctccgacg
     2761 gcgcgtcggc cgcggtgatc atgagcgacg ccgaagccgc caagcgcggg ctgaagccgc
     2821 tcggcatcta caaaggtctc gtggtcgccg gctgcgagcc cgacgagatg ggcatcggcc
     2881 ctgtctatgc cattcccaag ctcttgaagc gcttcgggct caagatggac gacatcgacc
     2941 tgtgggagct gaacgaggcg tttgcggtgc aggtcgtcta ctgccgcgac cgcctgggca
     3001 tcgacccgaa caaactcaac gtcaacggcg gcgccatcgc catcggccac ccgttcggca
     3061 tgaccggcgc gcgctgcacc ggccacgctt tgatcgaagg ccggcgccgc aaagccaaga
     3121 acgtcgtggt gacgatgtgc atcggcggcg gcatgggcgc cgccggcctg ttcgaggtcg
     3181 tgcattgagg agttgacgca ttcgatggcg aacagcacga catgtatctt tcgcgcgtca
     3241 tt
//
LOCUS       DASWGA010000119         1701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1914319, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000119 DASWGA010000000
VERSION     DASWGA010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1914319"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VF991_02840"
     CDS             complement(<1..394)
                     /locus_tag="VF991_02840"
                     /inference="COORDINATES: protein motif:HMM:NF013662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone oxidoreductase"
                     /protein_id="HEX9555402.1"
                     /translation="MELIGPVTESLATHRQRLGPLPALASGELIAELESSGMLGRGGA
                     GFPVGRKWRTVAERSSGRAVVLANGAEGEPLSHKDRSLMAARPHLVIDGALLGARAVG
                     ADDIIFYIGAEHRAADAAMRRALAERSTD"
     gene            complement(385..1059)
                     /locus_tag="VF991_02845"
     CDS             complement(385..1059)
                     /locus_tag="VF991_02845"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric reductase-like transmembrane
                     domain-containing protein"
                     /protein_id="HEX9555403.1"
                     /translation="MADQLPAARPPGRGRWHDPLHRPLAGSGERGGMNDTLLWYATRG
                     AGVVSLVLLTAVVVLGIVSVMRWQTAAWPRFLTTGFHRNLALTTLIFLAIHVVTAVVD
                     PFTALGWEAAIVPFSSPYRRFWLGLGVVAIYLLLAIVLTSLLRPLFGPRVWRMVHWLA
                     YAMWPVALIHSIGTGTDPRFAWMLAIEAVCVGSVIAAVTWRMRRIEPTAWRQLPASIT
                     QAKKWS"
     gene            complement(960..>1701)
                     /locus_tag="VF991_02850"
     CDS             complement(960..>1701)
                     /locus_tag="VF991_02850"
                     /inference="COORDINATES: protein motif:HMM:NF014477.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEX9555404.1"
                     /translation="ATAIDAALRAARLTDGAVDPTIGRAIRVAGYDDDFSRIAAEDFD
                     ERGREMKLRAWRVPGWQGIRLDRRLRTVWLPRDVELDLGSTGKALAADLAATAAIAAA
                     GGGGVLVSLGGDIAIAGEPPSGGWRILVAEDSRVRPDGDGDVICVPGGGVATSSTTVR
                     RWSRGGAVLHHIIDPQTSLTTSGPFRTVTVVAATCLDANIASTAAIVRGEAAIEWLTS
                     CRLPARLVEEDGTIHYIGRWPDPASVAA"
BASE COUNT          287 a          595 c          580 g          239 t
ORIGIN      
        1 tgtccgtgga gcgctcggcg agcgcgcgcc gcatggccgc gtccgccgcc cggtgttctg
       61 caccgatata aaagatgatg tcgtcggcgc caacggcgcg ggcgccgagc agcgccccgt
      121 cgatgaccag gtgcggccgg gccgccatca gcgatcggtc cttgtggctc aagggttcgc
      181 cctcggcgcc attggccagc accacggcgc ggcccgacga gcgctcggcg accgttcgcc
      241 atttgcgccc gacgggaaaa ccggctccgc ctcttccgag catgccgctc gactccagct
      301 cggcgatcaa ctcgccagag gcaagggcgg gcagcggccc aaggcgctgc cgatgcgtcg
      361 ccaggctttc ggtgaccggc ccgatcagct ccatttcttg gcctgcgtta tgctggccgg
      421 cagctgtcgc catgccgtcg gttcgatgcg tctcatccgc caggtaacgg ccgcgatgac
      481 actgccgacg cagactgcct cgatcgccag catccaggcg aatcgcggat cggtgccggt
      541 tccgatgctg tgaatcaggg cgaccggcca catcgcatac gcgagccagt ggaccatgcg
      601 ccagacgcgc ggaccgaaca gcggacgcag caggctggtg aggacgatcg cgagcaggag
      661 ataaatggcc accacgccga ggccgagcca gaaccggcga tagggcgagg aaaagggaac
      721 gatggcggct tcccagccaa gggccgtgaa ggggtcgacg acggccgtca cgacgtggat
      781 ggcgaggaag atgagcgtcg tcagcgccag gttgcgatga aaaccggtcg tcaggaagcg
      841 cggccaggcc gccgtctgcc agcgcatcac ggagacgatt cccagcacga ccacggcggt
      901 gagcagcacc aggctgacca cgccggcgcc gcgcgtcgcg taccagagga gcgtgtcgtt
      961 catgccgcca cgctcgccgg atccggccag cggccgatgt aatggatcgt gccatcttcc
     1021 tcgaccaggc gggcgggcag ccggcagctg gtcagccatt cgatggccgc ttcaccgcgc
     1081 acgatcgccg cagtcgaagc gatgttggcg tcgagacagg tggcggcgac cacggtcacc
     1141 gtgcggaagg gcccgctggt cgtcagactc gtttgcggat cgatgatgtg atggagcacc
     1201 gccccgccgc gtgaccaccg gcggacggtc gtgctcgacg tcgcgacccc gcccccaggc
     1261 acgcagatca cgtcgccgtc accgtcgggt ctgacgcgac tatcctcggc caccaggatt
     1321 cgccaacctc ccgacggcgg ctcgcctgcg atggcgatgt cgcccccgag gctgaccagc
     1381 accccgcccc cgcccgcggc ggcgatggca gcggtggcgg cgagatcggc cgccagcgcc
     1441 tttccggtcg agccgaggtc gagctcgacg tcccgcggca accaaacggt gcgtaaacgg
     1501 cgatcgagtc gaatgccttg ccagcccggc acgcgccagg cgcgcagttt catttctctc
     1561 ccccgctcat cgaaatcttc cgcggcgatg cgggagaaat cgtcgtcgta gccggccacg
     1621 cgaatagcac gaccgatggt gggatcgacc gccccatcgg tcaggcgcgc cgctcgcagg
     1681 gcggcgtcga tcgccgtcgc c
//
LOCUS       DASWGA010000120         4550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2293399, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000120 DASWGA010000000
VERSION     DASWGA010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4550
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2293399"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..957)
                     /locus_tag="VF991_02855"
     CDS             complement(139..957)
                     /locus_tag="VF991_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEX9555405.1"
                     /translation="MPTQAEKGQNFRDLHARPGLLLLPNPWDAGTAKLLQSLGFEALA
                     TTSLGMSNALGRVDGDNAVSRDELLQNCRVIAGATGLPVNADLENGYADDPKEAATIL
                     RDAAEAGVVGGSIEDWSGEKIYDFNLAVERVAAGVEMARSLKVPFTFTARAENLIRGV
                     KDLDDTIKRLKAFEKAGADVLYAPGLRDLATMKMVVGEIGKPLNVVMSAGDPDLTAEQ
                     LASVGVKRVSVGGALSRLALAAFMKGAREMMEKGGFTWMREAMPTSELKKVFRT"
     gene            complement(1044..2525)
                     /locus_tag="VF991_02860"
     CDS             complement(1044..2525)
                     /locus_tag="VF991_02860"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9555406.1"
                     /translation="MDTLADFARTDTEYFDVLIVGAGLSGIGAAWHLQHKCPGKSYAI
                     VEAREASGGTWDLFRYPGVRSDSDMYTLGYRFRPWKEAKAIADGPSILTYIREVASDH
                     AIDRRIRYGHRVVAASWSTPDARWTVEIERGPKRERVRLSCNFLWMCSGYYDYQAGYL
                     PDFPGIGRFGGRIVHPQKWTDDIDFAGKRVVVIGSGATAVTLVPAMAETAEHVTMLQR
                     SPTYMVTRPSQDQLANKLRRRLPLKLAYAATRWKNVLLGMYFYQMCKRKPEKVKSLLL
                     GGVRQMLGPDYDVDTHFTPRYNPWDQRLCLVPDADFFRAIRRGKVSIVTDHIESFTET
                     GLKLKSGAELPADLIVTATGLVLLPLGGAKLTVDGRAVDPAKTFIYKGMMYSDVPNLA
                     SVFGYTNASWTLKADLVCEYVCRLLNRMDRGGFRQCTPRNGDPTLKEEPWVNFSSGYI
                     QRALAKQPKQGSKRPWKLYQNYALDLLSLRFGSMRDKAMVFSR"
     gene            2612..4357
                     /locus_tag="VF991_02865"
     CDS             2612..4357
                     /locus_tag="VF991_02865"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018325014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9555407.1"
                     /translation="MENQRTERKLAAILAADVAGYSRLMSHDEEGTLRLLKAHLGELV
                     EPHIAAHRGRIVKRTGDGLLVDFSSAVEAVRCAVAIQAGMADRNRTAVDDSRIEFRIG
                     INLGDVIIEGDDIFGDGVNIAARLEALADPGGIFVSRAVRDSVRDKLGIVLEDLGEKP
                     VKNIARPVRVFRIGRASGAQPRSPPAMPDKPSIAVLPFANMSGDAEQEFFSDGISEDL
                     ITDLSKVSALFVIARNSSFTYKGRTVKVQEIGRELGVRFVLEGSIRKAGNRVRITAQL
                     VDAQSGGHLWADRFDRELTDIFATQDEVVQKIVEALAIKLTRVEEQDLRRGGTKSLEA
                     YESWLRARQLLGRGTRESIAQARALHRRAIELDPNFCSPHVGLAFAAVSDYVNAWVPD
                     PTAALEEGERWARRAIDLDERQPGGHVAMANVMVWQRRHDEAIRELHRAVELDSNYAQ
                     GHALLGMALMYSGRSAEALEAFATSMRLDPLYPDIVLHLMAQAHFSLGQYETAASHLL
                     ERIARNPNTDASRMLLAACFGHLGRTDEARAAWAGLLEVNPGFSVTQREGVLPYKDPR
                     DFRRILDGLAKAGLP"
     gene            complement(4362..>4550)
                     /locus_tag="VF991_02870"
     CDS             complement(4362..>4550)
                     /locus_tag="VF991_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEX9555408.1"
                     /translation="GRSFTKADLEAAGVKRISLATSLYRAAMTGLLDAAKEVKEKGTF
                     TYLDRAIPTPDLNAFMKE"
BASE COUNT          753 a         1535 c         1484 g          778 t
ORIGIN      
        1 cgccgcatcg ccggcgccgc ggttgatccc atgcggaaga agattctttc atagctgggg
       61 gcgcgccact ctagtggcgc gatcttcgcc caatgcgagc aaagacgcgc gactggagtc
      121 gcgcgcgccc agcaaagact acgttctgaa caccttcttc agttcgctgg tcggcatggc
      181 ctcgcgcatc caggtgaaac cgcccttctc catcatctcg cgcgcgccct tcatgaaggc
      241 ggccagcgcc aggcgcgaca gcgcaccgcc gacactgacg cgcttgacgc ctacagatgc
      301 cagctgctcg gcggtgagat ccgggtcgcc ggcgctcatg accacgttca ggggcttgcc
      361 gatctcgcct accaccatct tcatggtcgc caggtcgcgc agccccggcg cgtagagcac
      421 atcggcgccc gccttctcga aggcttttag ccgcttgatc gtgtcgtcga gatccttgac
      481 gccgcgaatc aggttctcgg cccgcgccgt gaaggtgaac ggcactttta gcgagcgcgc
      541 catctcgacg ccggcggcga cccgctcgac ggcgaggttg aagtcataga tcttctcccc
      601 gctccaatcc tcgatcgagc cgccgaccac gccggcttcg gcggcgtcgc gcagaatggt
      661 cgccgcctcc ttgggatcgt cggcatagcc gttctcgagg tcggcattga ccggcaggcc
      721 ggtggcgccg gcgatcacgc ggcagttctg taaaagctcg tcacggctca ccgcgttgtc
      781 gccgtcgacg cggccgagcg cattcgacat gccgaggctg gtcgtcgcca gcgcctcgaa
      841 gcccagcgac tgcagcagct tggcggtgcc ggcatcccac gggttgggca gcagaagaag
      901 acccggccgg gcatgcaggt cgcggaaatt ttggcccttt tcggcttgcg tgggcatggg
      961 catctccggt tcgaaggcgc cgagactgcg ccccctgccg tgctcttgtc gatgcactat
     1021 tgttcggccg cggccgaaac gtctcagcgc gaaaacacca tcgccttgtc gcgcatcgag
     1081 ccgaagcgca agcttagaag atccagagca tagttctggt agagcttcca cggccgcttg
     1141 gacccctgct tgggctgctt ggccagcgcg cgctggatat agccggagga gaaattcacc
     1201 cacggctcct ccttgagcgt cggatcgccg ttgcgcggcg tgcactggcg aaagccgccg
     1261 cgatccatgc gattgagcag ccggcagaca tactcgcaga ccaggtcggc cttcagcgtc
     1321 cacgaggcgt tggtgtagcc gaacaccgac gcgaggttgg gcacgtcgct gtacatcatg
     1381 cccttgtaga tgaaggtctt ggccggatcg acggcgcggc cgtcgaccgt aagcttggcg
     1441 ccgcccagcg gcagcagcac cagtccggtt gccgtcacga tcaggtcggc cggcaattcg
     1501 gcgccggatt tcagcttcag cccggtctcg gtgaagctct cgatgtggtc ggtgacgatc
     1561 gacaccttgc cgcggcggat ggcgcgaaag aaatccgcgt cgggcacgag gcagagccgc
     1621 tggtcccacg gattgtagcg cggcgtgaag tgcgtatcga cgtcgtagtc cggccccagc
     1681 atctggcgca cgccgcccag caacaggctt ttaaccttct ccggcttgcg cttgcacatc
     1741 tggtagaaat acatgccgag caggacgttc ttccagcgcg tcgccgcgta ggcgagcttg
     1801 agcggcaggc ggcggcgcag cttgttggcg agctgatcct ggctcggccg cgtcaccatg
     1861 taggtcggcg agcgctgcag catggtgacg tgctcggccg tctcagccat cgccggcacc
     1921 agggtcaccg ccgtggcgcc gctgccgatc acgaccacgc gcttgccggc aaagtcgatg
     1981 tcgtcggtcc atttctgcgg atggacgatg cggccgccga agcggcctat gccgggaaag
     2041 tccggcaggt agcccgcctg gtaatcgtag tagccgctgc acatccagag gaaattgcag
     2101 ctcagccgca ccctctcgcg tttgggtccg cgctcgatct cgacggtcca ccgcgcgtcc
     2161 ggcgtcgacc atgaggccgc cacgacgcgg tggccgtagc ggatcctgcg gtcgatagcg
     2221 tggtcgctcg cgacctcacg gatataggtc aggatcgacg gtccgtcggc gatcgccttg
     2281 gcctccttcc acggccggaa gcgatagccc agcgtgtaca tgtcggaatc ggagcggacg
     2341 ccgggatagc ggaacaggtc ccaggtgccg ccgcttgcct cgcgcgcctc gacgatggcg
     2401 tagctcttgc ccgggcattt gtgctgcagg tgccaggcgg cgccaatgcc ggaaagcccg
     2461 gcgccgacga tcaggacgtc gaaatattcg gtatcggtac gtgcaaaatc ggcaagcgta
     2521 tccattgccc taacatctgc gactctaccc aggcgcgcaa ccccggcggc ctcgcgcaag
     2581 cggcgaagcg gcgttatcgt atgcccaaga gatggaaaac cagcggaccg aacgcaagct
     2641 cgcggcgatc ctggccgccg atgtcgccgg ctacagccgg ctgatgagcc acgacgagga
     2701 aggcacgctg cgcctgctca aggcgcatct cggcgagctc gtcgaaccgc acatcgccgc
     2761 ccaccgcggg cgcatcgtca agcgcaccgg cgacggcctg ctggtggatt tttccagcgc
     2821 ggtcgaggcg gtgcgctgcg ccgtcgccat ccaggccggc atggccgacc gcaaccgtac
     2881 cgctgtggat gacagccgca tcgagttccg catcggcatc aacctcggcg acgtgatcat
     2941 cgagggcgac gacatctttg gcgacggcgt gaacatcgcc gcccggctgg aggcgctggc
     3001 cgacccgggc ggcatcttcg tgtcgcgcgc cgtacgcgat tcggtgcgcg acaagctcgg
     3061 catcgtgctc gaagacctgg gcgagaagcc ggtgaagaac atcgcccggc cggtacgggt
     3121 ctttcgtatc ggccgggcga gcggggcgca gccccggtcg ccgccggcca tgcccgacaa
     3181 gccgtcgatc gcggtgctgc cgttcgccaa catgagcggc gatgccgagc aggagttttt
     3241 cagcgacggc atctccgagg acctgatcac cgacctttcg aaggtctcgg ccctattcgt
     3301 gatcgcacgc aactcgtcgt tcacctacaa gggccgcacc gtcaaggtgc aggagatcgg
     3361 ccgcgagctc ggcgtgcgct tcgtgctcga aggctccatc cgcaaggccg gcaaccgcgt
     3421 gcgcatcacc gcccagctgg tcgacgccca aagcggcgga cacctgtggg ccgaccgctt
     3481 cgaccgcgag ctgaccgaca tcttcgccac ccaggacgag gtggttcaga agatcgtcga
     3541 ggcgctcgcc atcaagctca cccgggtcga ggagcaggac ctgcggcgcg gcggcaccaa
     3601 gagcctggaa gcctacgaaa gctggctgcg cgcccgccag cttctcggtc gcggcacgcg
     3661 cgaatcgatc gcccaggctc gcgccctgca ccgacgggcg atcgagctcg atccgaattt
     3721 ctgctcgccc cacgtcggcc tggccttcgc cgcggtctcg gactacgtca atgcctgggt
     3781 gcccgacccg acggcggcgc tcgaagaggg tgaacggtgg gcccgccgcg ccatcgatct
     3841 ggacgaacgc cagcccggcg gccacgtcgc gatggccaac gtgatggtct ggcagcgtcg
     3901 ccacgacgaa gccatccgcg agctgcatcg cgcggtcgag ctcgattcca actatgccca
     3961 aggccacgcc ttgctcggca tggcgctgat gtattcgggt cgttcggcgg aggcgctgga
     4021 ggcgtttgcg acctcgatgc ggctcgaccc tctctatccc gacatcgttc tgcatttgat
     4081 ggcgcaggcg catttcagcc tcggccagta tgagacggcc gcctcgcatc tcctggagcg
     4141 catcgcgcgc aatcccaaca ccgatgccag ccgcatgctg ctcgcggcct gtttcggcca
     4201 tctcggccgc accgacgagg cgcgcgccgc ctgggcgggc cttctggagg tcaatcccgg
     4261 cttctcggtg acccagcgcg aaggggtatt gccctacaag gaccctcgcg acttccggcg
     4321 catccttgat ggattggcga aggccggatt gccctagcga cctattcctt catgaaggcg
     4381 ttgagatccg gcgtcgggat cgcccggtcg agataggtga aggtgccctt ctccttcacc
     4441 tccttggccg cgtccagcag cccggtcatg gccgcgcgat agagcgaggt ggcgaggctg
     4501 atgcgcttga cgccggcggc ctcgaggtcg gctttggtga aggaacggcc
//
LOCUS       DASWGA010000121         4149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2293573, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000121 DASWGA010000000
VERSION     DASWGA010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4149
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2293573"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1794)
                     /locus_tag="VF991_02875"
     CDS             complement(<1..1794)
                     /locus_tag="VF991_02875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HEX9555409.1"
                     /translation="MDLPQRQGLYDPRNEHDSCGVGFVVDIKGRKSHAIVRQGLSILV
                     NLDHRGAVGADPLVGDGAGCLIQIPDALLRDWARQQAIDLPPPGHYAVAMCFLPQDEA
                     ARKFAVRRLEHFIKVEKQRLVGWRDVPTDTTGLGKAVIERMPVIKMAIVGRGPKLGDQ
                     DAFERKILAIRKQTQNPLVDLERKHKLPGLSQLYVPSFSTRTVVYKGLLLAPQVESFY
                     EDLRNPLTESALCLVHQRFSTNTFPSWRLAHPYRFIAHNGEINTVRGNVNWMYARRRT
                     MESDLIGADLDKMWPIIPHGQSDTACVDNALELLVAGGYSLSHAMMMLIPEAWAGNPL
                     MDAKRKAFYEYHAALMEPWDGPACIAFTDGRQIGATLDRNGLRPARFLVTDDDKVVMA
                     SEAGVLPIPDDKIVRKWRLQPGKMLLIDLEQGRIVEDEELKRSLAEAEPYEEWLKQTQ
                     YKLEEMSDLPDAPVPAPSNDPTTLLDRQQAFGYTQEDMQFFLEPMSREPDDPVGSMGT
                     DTPIAVLSRKPKLLYNYFKQNFAQVTNPPIDPIREELVMSLVSMIGPRPNLFDLQGVA
                     GTKRLEVRQPILTDADLEKIRSISEIADTHFK"
     gene            1950..2237
                     /locus_tag="VF991_02880"
     CDS             1950..2237
                     /locus_tag="VF991_02880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555410.1"
                     /translation="MSFRSICRLWAPIAGLSLILGLGACGGSQEISKAWNGAGWYLEK
                     PYLVVLGGPRYFGGPFSYDKCEEERIKLPAETATQMLCVEENRRPDRYGFF"
     gene            complement(2238..>4149)
                     /locus_tag="VF991_02885"
     CDS             complement(2238..>4149)
                     /locus_tag="VF991_02885"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006562 - proline catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HEX9555411.1"
                     /translation="DPVERALALEPVGAPHPRIALPTNLFGKLRKNSHGLDLANEQVL
                     ASLAATLPKMVPLAAVPLLADGAREGSARDVTNPADRRDRVGTVIEATADLVDEACTL
                     AKPWQEPPAARAATLRRVADLMEARLEPLLGPIVREAGKTLGNAVGEVREAVDFLRYY
                     AGCVEGFDNDTHRPLGLVACISPWNFPLSIFTGQIAGALAAGNAVIAKPAEETPLISA
                     LAVALFHEAGVPREVLQLLPGDGRVGGRLVGNPAVAGVVFTGSTEVARSINRQLAERL
                     CADGRPPVLIAETGGQNALVADSSALPEQLVLDALTSAFDSAGQRCSALRVLCLQDDI
                     ADGMMPMLTGAMAELGVGSPDRLSVDVGPVITAEAQQRLVDHIERMRAAGHAVHQAAL
                     PAEAGEGTFVPPTIIEIDSVSDLPGEVFGPVLHVLRYRREDMEAVVRSVNATGFGLTF
                     GVHSRIDETIERATATSAAGNHYVNRNMIGAVVGVQPFGGHRLSGTGPKAGGPLYVHR
                     LLSQRPAFEPTLGELLGPVGERNVYTLRPKGAVLCVARDPEQLKAQRDLVRATGNRIA
                     TDESDRGLAVVLFDGGKDELLALNKRLAARDGPIVPVHPKPYPREFLFDEVSLSVNTA
                     AAGGNASLMAIG"
BASE COUNT          651 a         1389 c         1412 g          697 t
ORIGIN      
        1 cttgaaatgg gtgtccgcga tctccgaaat cgaccggatc ttttccaggt cggcgtcggt
       61 caggatcggc tggcgcacct cgagacgctt ggtgccggcc accccttgca gatcgaacag
      121 gttcggccgc gggccgatca tcgacaccag cgacatcacc agctcctcgc ggatcggatc
      181 gatcggcgga ttggtgacct gcgcgaagtt ctgcttgaaa taattgtaga ggagcttggg
      241 cttcctcgag agcacggcga tcggcgtgtc ggtgcccatc gagcccaccg gatcgtcggg
      301 ctcgcggctc atcggctcga ggaagaactg catgtcttcc tgcgtgtagc cgaacgcctg
      361 ctggcgatcg agcaaggtgg tcggatcgtt ggacggcgcc ggcactggcg cgtcgggcag
      421 gtccgacatc tcctcgagct tgtactgggt ctgcttcagc cactcctcgt agggctcggc
      481 ctccgccaag ctgcgcttca gctcctcgtc ctcgacgatg cggccctgct cgagatcgat
      541 cagcagcatc ttgcccggct gcaggcgcca cttgcgcacg atcttgtcgt cggggatcgg
      601 cagcacgccc gcttccgaag ccatgacgac cttgtcgtcg tcggtcacca ggaagcgcgc
      661 cgggcgcaat ccattgcgat cgagggtggc gccgatctgg cggccgtcgg tgaaggcgat
      721 gcaggccggg ccgtcccatg gctccatcag ggcggcgtga tactcgtaga aggccttgcg
      781 cttggcatcc atcagcggat tgccggccca cgcctcgggg atcagcatca tcatggcgtg
      841 cgacagcgag tagccgccgg cgaccaggag ctcgagcgcg ttgtcgacac aggcggtgtc
      901 cgactggccg tgcgggatga tcggccacat cttgtcgagg tcggcgccga tcaggtcgga
      961 ttccatggtg cgccggcggg catacatcca gttgacgttg ccgcgcaccg tgttgatctc
     1021 gccattgtgg gcgatgaagc gatagggatg cgccagccgc cacgacggga acgtattggt
     1081 cgagaagcgc tgatgcacca ggcagagcgc cgactcggtc agcggattgc gcaggtcctc
     1141 gtagaagctc tcgacctggg gggcgagcag caggcccttg tagaccacgg tgcgcgtgga
     1201 gaaggacggc acgtagagct gcgacaggcc gggcagcttg tgcttcctct ccagatcgac
     1261 cagcggattc tgggtctgct tgcggatggc gaggatcttg cgctcgaagg cgtcctggtc
     1321 gccgagcttg ggcccgcggc cgacgatcgc catcttgatc accggcatgc gctcgatcac
     1381 cgccttgccc aggccggtcg tgtcggtcgg cacgtcgcgc cagcccacaa gcctctgctt
     1441 ctcgaccttg atgaagtgtt ccagccgcct gacggcgaat ttccgcgccg cttcgtcctg
     1501 cggcaggaag cacatggcga cggcatagtg gccgggcggc ggcaggtcga tcgcctgctg
     1561 gcgcgcccag tcgcgcagca aggcgtcggg gatctggatc aggcagcccg cgccgtcgcc
     1621 gaccagcggg tcggcgccga cggcgccgcg atggtcgaga ttgaccagga tgctcaggcc
     1681 ctggcgcacg atggcatgcg acttgcggcc cttgatgtcg accacgaagc cgacgccgca
     1741 ggagtcgtgc tcgttgcgcg gatcgtagag cccctgtctt tgcggcaaat ccatcaattc
     1801 ttgccttgct gcccgattgt gcggcattcc gccggatgcg cgtgctcggg gcattattag
     1861 cccggccgcc cggcccggtg aaagcaattg ttgcgacgca aaagcccctg tagtttgcgc
     1921 ctgtccgcca cgggggagat gaaagaaaga tgtcgttccg gtcgatctgc cgcctgtggg
     1981 ctcccatcgc aggcctgtcg ttgatcctcg ggcttggcgc ctgcggcggc tcccaggaga
     2041 tctccaaggc gtggaacggc gccggctggt atctggagaa gccttacctc gtcgtccttg
     2101 gcggcccacg atatttcggc ggccccttca gctacgacaa gtgcgaagag gagcgcatca
     2161 agctgccggc ggaaaccgcc acgcagatgc tgtgcgtcga ggaaaaccgc cgccccgacc
     2221 gttacgggtt cttttagcta accgatcgcc atcaggctgg cgttgccgcc ggcggccgcg
     2281 gtgttgacgc tgagcgagac ctcgtcgaac aggaattcac gcggataagg ttttggatgg
     2341 accggcacga tcggcccatc gcgcgccgcc aggcgcttgt tgagggccag caactcgtcc
     2401 ttgccgccgt cgaacaatac aacggcaagg ccccggtccg attcatcggt ggcgatccga
     2461 tttccggtcg cccgcaccag gtcgcgctga gccttcagct gctcaggatc gcgcgcgacg
     2521 cacagcacgg cgcccttggg ccgcagcgta tagacgttgc gctcgccaac ggggcctaaa
     2581 agctctccaa gggtgggctc gaatgccggc cgctgcgaca acaggcgatg cacatagagc
     2641 ggcccgccgg ccttgggacc ggtgcccgac agccgatggc cgccgaacgg ctgcacgccg
     2701 accacggcgc cgatcatgtt gcggttgacg tagtggttgc cggcggcgct ggtcgcggtc
     2761 gcgcgctcga tggtctcgtc gatgcggctg tgcaccccga aggtcaggcc gaagccggtg
     2821 gcgttcaccg agcgcaccac cgcctccatg tcctcgcggc gatagcgcag cacatgcagg
     2881 acgggcccga acacctcgcc cggcaggtcc gacaccgaat cgatttcgat gatggtcggc
     2941 ggcacgaagg tgccctcccc ggcttccgcc ggcagcgccg cctgatggac ggcatggccg
     3001 gccgcgcgca tgcgctcgat atgatcgacc aggcgctgct gcgcctccgc cgtgatcacc
     3061 gggccgacgt cgaccgagag gcgatctggg ctgccgacgc cgagctcggc catcgcgccc
     3121 gtcagcatcg gcatcatgcc gtcggcgatg tcgtcctgca ggcaaagcac gcgcagcgcc
     3181 gagcagcgct ggcccgccga atcgaacgcc gaggtgagcg cgtcgagcac gagctgctcg
     3241 ggcagcgccg aggagtccgc gaccagggcg ttctgcccgc cggtctcggc gatcagcacg
     3301 ggtggccttc cgtcggcgca tagccgttcg gccagctgcc ggttgatcga acgcgcgacc
     3361 tcggtcgagc cggtgaacac cacgcccgcc accgccggat tgccgaccag tcggccgccg
     3421 accctgccgt cgcccggcag cagttgcagc acctcgcgcg gcacgccggc ctcgtggaac
     3481 aacgcgacgg ccagcgcgga gatcagcggt gtctcctcgg ccggcttggc gatcacggcg
     3541 ttgccggcgg cgagtgcgcc cgcgatctgg ccggtgaaga tcgacagcgg aaagttccac
     3601 gggctgatgc aggcgaccag gcccagcggc cggtgcgtgt cgttgtcgaa gccttcgaca
     3661 cagccggcat aatagcgcag gaagtcgacc gcctccctca cctcgccgac ggcgttgccc
     3721 agcgtcttgc cggcctcgcg cacgatcggg ccgagcaatg gttccagccg cgcctccatc
     3781 aggtcggcga cccggcgcag ggtggcggcg cgcgccgccg gcggctcctg ccacggcttg
     3841 gccagtgtgc aggcttcgtc aaccagatcg gccgtcgcct cgatcaccgt gccgacgcgg
     3901 tcgcgccggt cggcgggatt tgtgacatcc cgcgcgctgc cctcgcgcgc gccgtcggcc
     3961 agcagcggca cggcggcgag cggcaccatc ttcggcaagg tcgcggccag cgacgccagc
     4021 acttgctcgt tggcaagatc gaggccgtgc gaattttttc gcagctttcc gaagagattg
     4081 gtcggcaagg cgatcctggg atgcggcgcg cccaccggct cgagcgccag ggcgcgttcg
     4141 accggatcg
//
LOCUS       DASWGA010000122         7049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1536486, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000122 DASWGA010000000
VERSION     DASWGA010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7049
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536486"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..629)
                     /locus_tag="VF991_02890"
     CDS             complement(<1..629)
                     /locus_tag="VF991_02890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555412.1"
                     /translation="MRPIILVGGLAAALVCSSGVALAQKSGGVLRIYHRDNPPSASIH
                     EEATNSTVVPFMSVFNNLVIYDQSKPQNSPQSIVPDLAKSWSLSADGKDLTFTLQEGV
                     KWHDGQPFTAKDVVCTLDMLAGKSEQRLRRNPRTSWYGNVDHVDAASDHEVTIHLKRP
                     QPSMLALLASGYSPIYPCHIPSAQMRTKPIGTGPFKFVEFKQNEGIKLT"
     gene            complement(736..1815)
                     /locus_tag="VF991_02895"
     CDS             complement(736..1815)
                     /locus_tag="VF991_02895"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9555413.1"
                     /translation="MNDLAFGFQAAPASDVHKSDQSLYREVMEDCALGHRLGYDAAWL
                     LEHHFSDYYPTPSPLLFMAHIAAAFPDLSLGTSVLVLPWYHPLRLAEEIAMLNSMTRG
                     TLHLGIGRGTAKMEYDAYNVDMNEARARFAECYHIVEKGLSGEPFSHDGSFWKIERPI
                     RLRPEPIAKKVRFYGAIGSPGSAEVMGDLGVAPICLSTFPDKLLSRILDRWRARAGAA
                     AKDAILPISVKMFIADSDEEARQLGRRYYPPYFDLQCSHYESDADPWADIPEYQDFSR
                     MFANLRKLTDPAELGPFMDSNLVGSPATICRRIDQLAALGFNYFMVSSATPGTPIELR
                     QRMMTRFAEEVCPRYSRAMRRKQAA"
     gene            1929..5234
                     /locus_tag="VF991_02900"
     CDS             1929..5234
                     /locus_tag="VF991_02900"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEX9555414.1"
                     /translation="MSGRRRIGWAAAAIFGPLAVAALAAPYLVDVEAYKPALIQAVKE
                     ATGRELVIEGPMRLSLLPVPQVSAQQVHFANAAGAEGAQMIDVRWIGASPSWWALLKG
                     QVEVGRLTLYQPTIVLETDANGVPNWQFKPGAGAAQPKGAPAAGLHLAVGKLRIVQGT
                     LSYTNPQTKQTLKAEQVEATASVGSLQGPLSIAGTATVNGVPLSLDFSLGEPKPQGHE
                     TAFSLQVSSGKLDFKGTVSEVSANADVKGHLAVSTGVLTNFIATVVRATGQAEPKFDA
                     PVVGTFTFDGGVEYSPTRLAVTDFKMSLAGETASGSLALEETKTPSLRGHVTLPKVDV
                     EKWLALLATPGAFQPPPPASKPATVAKPGSLSPFPVEMDVSLSLDIAEVLYRKGTVRD
                     LALAVEIHKGVITVPQLKAVLPGGMVLQAHAAGAVAPATAPAKAATPIAKPAANPVQA
                     SGEISLAGPKLRDTLAWLDIDTSGVPADKLQTLDLKGTLASTANGLQIGDLAVDLDGQ
                     HATGSGAVTFAVPVTATATLQLDRFDLDAYLPPEPAPPIAPTAGAATAATDAPKAPAS
                     TPATIVPPAPPLPDKTVPVFGLKVKLAKLVFRKQTLSGVETDASVQGNLLKLNSVKVA
                     DLLGAKIDLHGSMTDFATAPRYDLTFNATMPDADKVIDYAGLPKFINGKFGAVSAGGG
                     VVGTADAIALRNATATLLGSTLRATGALSLGQNFRFDFPSFTLQTQDASRLLAVATGR
                     GQNGIGAISAAGAFKGDDQRASFDGDLTAMGTPMAGHIDAALGKRPNIKANLRIPGTL
                     DFDHWLGVAASPPPAQTVAAARPAAGAPAAAPVLPVPVGPPRVATGKPVDLSALRAFD
                     ATLNLETSAIAIASLKVTYADMQASLRNGLFKIAKLTGQFYGGAVDFNGTVDAGKDTL
                     ALDLKGSLQGIYLSEMLRGTAGTNNFGNQHLMVSVDGKITVMNIELKGSGTTPEQIRN
                     TLSGSGQVSGYLYPAVAGGSLGFASFATGLGSVFSTEMGFNSAVLAGFINHQSPITGE
                     LLLSGNTVTLQNHKVQGQNAIALITSRTSLTQAITDTTIALDTGRRGPADYVMTVKGP
                     ISSPTMSTRGGGN"
     gene            complement(5244..5915)
                     /locus_tag="VF991_02905"
     CDS             complement(5244..5915)
                     /locus_tag="VF991_02905"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEX9555415.1"
                     /translation="MDQAQPVGRIDVISDVICPWCYIGKRQLERALDLLEHQRLRFTV
                     AWHPFQLNPDMPSEGVDRTQYRIAKFGSAERARQLDERITETAAAVGLDFHLERLSRT
                     PNTLNAHRLIRLAGQKGVQDGVVEALFEGYFGNGADIGDDKVLAALGAEGGLDRDDVT
                     AMLSGDSGRTEVLAADRKAHSCGIQGVPSFALQGHVLFSGAVPAAEMAQAFRQAWDIL
                     KARAA"
     gene            5984..6685
                     /locus_tag="VF991_02910"
     CDS             5984..6685
                     /locus_tag="VF991_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555416.1"
                     /translation="MEKPEYRSALIVGTGPGLSASLARLFAKNGLAVSVAARQTDKLA
                     ALAKETGAEVHACNAADPKEVAGLFAALDAGGRTADVVVYNASGRVRGALVDLPPDDV
                     RRAIEVSAFGGFLVSQQAAQRMVPKAHGAIFLTGATAGVKGFPLSSAFAMGKFALRGL
                     AQAMARELSPQGIHVAHFVIDGGIRSASRPVPANSPDSLLDPDAIAETYWATLQQHRS
                     AWSWEVEVRPWVEKF"
     gene            6733..>7049
                     /locus_tag="VF991_02915"
     CDS             6733..>7049
                     /locus_tag="VF991_02915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555417.1"
                     /translation="MRIHNIYVDDKGESHFRDIEVEWKHEGRGGKTSATFPATGIIFR
                     QTPGSYDYEWHPAPRRQYIINLDGGVSIQASDGETRIIGAGEVLLVEDVGGKGHFSKA
                     VSG"
BASE COUNT         1158 a         2361 c         2368 g         1162 t
ORIGIN      
        1 ttcgtgagct tgatgccttc gttctgcttg aactcgacga acttgaaggg tcccgtgccg
       61 atcggcttgg tgcgcatctg cgccgagggg atgtggcagg ggtagatcgg cgagtagccc
      121 gacgccagca gcgccagcat cgagggctgc ggccgcttga gatggatagt gacttcgtgg
      181 tcggaggcgg cgtcgacgtg gtcgacattg ccgtaccacg aggttctggg gttgcggcgc
      241 agtctctgct cgctcttgcc ggccagcatg tcgagggtgc agacgacgtc cttggcggtg
      301 aagggctggc cgtcgtgcca cttcacgccc tcctgcaggg tgaaggtgag atccttgccg
      361 tcggcgctga ggctccacga cttggcgaga tcgggcacga tgctctgcgg gctgttctgc
      421 ggcttgctct ggtcgtagat caccaggttg ttgaacaccg acatgaacgg cacgacggtg
      481 gagttggtcg cctcctcgtg aatcgaggcg ctgggcggat tgtcgcgatg gtagatcctg
      541 agcacgccgc cgcttttctg agccaacgca acgccactcg agcacaccag ggcagccgcg
      601 aggccaccca ccaagatgat cggccgcatt gtcgttcctt ccctgtattg cgccgcgtgt
      661 cgagccgctg cgtcgcgtca attctagcgg ggatgtcatc ctgagcgaag tcgttgcttg
      721 cacatccagc gagagctacg ccgcctgctt gcgcctcatc gctcgcgaat agcgcgggca
      781 cacctcctcg gcgaaccggg tcatcatgcg ctggcgcagt tcgatcggcg tgccgggcgt
      841 ggccgacgac accatgaaat agttgaagcc gagcgcggcg agctggtcga tgcgccggca
      901 gatcgtggcc gggctgccga ccaggttgga gtccatgaac ggtccgagct cggcgggatc
      961 ggtgagcttg cgcaggttgg cgaacatgcg gctgaaatcc tggtactcgg gaatgtcggc
     1021 ccacggatcg gcgtcggact cgtagtgact gcactgcagg tcgaagtagg gcgggtagta
     1081 gcggcggccg agctggcgcg cctcctcgtc gctgtcggcg atgaacattt tgaccgagat
     1141 cggcaggatc gcatccttgg ccgccgcgcc ggcccgcgcc cgccagcggt cgagaattct
     1201 gctcagcagc ttgtcgggaa aggtcgacag gcagatcggc gccacgccga gatcgcccat
     1261 tacctcggcg ctgcccgggc tgccgatggc accgtagaag cgcactttct tcgctatcgg
     1321 ttcgggcctc agccgaatcg gccgctcgat cttccagaac gatccgtcgt ggctgaacgg
     1381 ctcgcccgaa agccccttct cgacgatgtg gtagcattcg gcgaagcgcg cgcgggcctc
     1441 gttcatgtcg acgttgtagg cgtcgtattc catcttggcg gtgccgcggc caatgccgag
     1501 atgcagcgtg ccgcgggtca tgctgttcag catggcgatc tcttcggcga gccgcagcgg
     1561 atggtaccag ggcagcacca gcaccgatgt gccgagcgag aggtcgggaa aggccgccgc
     1621 gatgtgcgcc atgaagagca gcgggctcgg cgtgggatag tagtcgctga aatggtgctc
     1681 gagcagccag gcagcgtcgt agcccagccg gtggcctagc gcgcaatcct ccatgacctc
     1741 gcgatagagc gactggtcgg acttgtgcac gtcgctcgcc ggcgcggcct ggaaaccgaa
     1801 ggctaggtcg ttcatttcgt ttcctcgggt tcgtttgttg ctctaaggct agcaggccgg
     1861 gcggtttgct gtcgctcgct ggattggcag cctctcgctc tgtgatgcgt tttgcttagg
     1921 ccatggccat gtcggggcgc agacggatcg gatgggcggc agccgcgatt ttcggcccgc
     1981 tggcggtcgc cgccttggcg gcgccctatc tggtcgacgt cgaagcctac aagcccgccc
     2041 tgatccaggc ggtgaaggag gcgaccggcc gcgagctggt gatcgaagga ccgatgaggc
     2101 tgtcgctctt gccggtgccg caggtcagtg cccagcaggt tcatttcgcc aatgccgccg
     2161 gcgccgaggg cgcccagatg atcgatgtgc gctggatcgg cgcctcgcca tcctggtggg
     2221 cgttgctcaa gggccaggtc gaggtcggcc ggctgacgct ttaccagccg accatcgtgc
     2281 tggagaccga tgccaacggc gtgcccaact ggcagttcaa gccgggtgcc ggcgccgccc
     2341 agccgaaggg cgcgccggcc gccggcctgc atctcgcggt gggcaagctg cgcatcgtcc
     2401 agggcacgct gagctacacc aatccgcaaa ccaaacagac gctcaaagcc gagcaggtcg
     2461 aggcgacggc ctcggtcggc tccttgcagg ggccgttgtc gattgccggc accgccacgg
     2521 tgaacggcgt gccgctgtcg ctggatttca gccttggcga accgaagccc cagggccacg
     2581 agaccgcgtt cagcctgcag gtgtcgagcg gcaagctcga cttcaagggc actgtcagcg
     2641 aagtcagcgc caacgccgat gtgaagggcc atctcgcggt gtcgaccggc gtgctgacca
     2701 acttcatcgc caccgtggtt cgagcgaccg gacaggctga gcccaagttc gacgctccgg
     2761 tggttggcac cttcaccttc gacggcggtg tcgagtattc gccgacgcgg cttgccgtca
     2821 ccgacttcaa gatgtcgctg gccggcgaga ccgcgtcggg ctctttggcg ctcgaggaga
     2881 cgaaaacgcc atcgctcagg ggccacgtca ccttgcccaa ggtcgatgtc gagaagtggc
     2941 tggcgctgct ggccacgccg ggcgccttcc agccgccacc gccggcgtcc aagcctgcca
     3001 cggtcgccaa gcccggatcg ctctcgccgt tccccgtcga gatggatgtt tcgctgtcgc
     3061 tcgatatcgc cgaggtgctc tatcgcaagg gcacggtgcg cgacctggcg ctggcggtcg
     3121 agatccacaa gggcgtcatc accgtgccgc agctcaaagc cgtgttgccc ggcggcatgg
     3181 tcctgcaagc ccacgccgcc ggtgcggtgg cgccggcaac ggcgcccgcc aaggccgcga
     3241 cgccaatcgc caagcctgcg gccaatccgg tgcaagccag cggcgagatc agcctcgccg
     3301 ggccgaagct gcgcgatacg ttggcctggc tggacatcga tacgtcaggc gtgccggccg
     3361 acaagctgca gacgctcgac ctcaagggca cgctcgcctc gacggcgaac ggcctgcaga
     3421 tcggcgatct cgcggtcgat ctcgatggcc agcacgccac cggcagcggc gccgtcacct
     3481 tcgcggtgcc ggtgacggcg acggcgacgc tgcaactcga ccgcttcgac ctcgatgcct
     3541 atctcccgcc cgaaccggcc ccgccgatcg cgccgaccgc cggcgccgcc acggcggcga
     3601 ccgacgcgcc gaaggcgcct gcgagcaccc cggcgacgat cgtgccgccg gcgccgccgc
     3661 tgcccgacaa gaccgtgccg gtgttcggcc tcaaggtgaa gctggccaag ctggtgttcc
     3721 gcaagcagac gctgagcggc gtcgagaccg acgcgtcggt ccagggcaat ctcctgaagc
     3781 tgaattcggt caaggtcgcc gacctgttgg gcgccaagat cgacctccat ggctcgatga
     3841 ccgatttcgc cacggcgccg cgctacgacc tcaccttcaa cgccaccatg ccggatgccg
     3901 acaaggtgat cgactatgcc ggcctgccga aattcatcaa cggcaagttc ggcgctgtat
     3961 cggccggcgg cggcgtggtc ggcaccgcgg acgccatcgc cctgcgcaac gcgaccgcga
     4021 ccctgctggg cagcaccctg cgggccaccg gcgcgctgtc gttggggcag aacttccgct
     4081 tcgacttccc gagcttcacg ctgcagaccc aggatgcgag ccggctgctc gcggtggcga
     4141 cgggtcgtgg acagaacggc attggcgcga tttcggccgc tggcgccttc aagggcgacg
     4201 accagcgcgc gagcttcgac ggcgacctca cggcgatggg cacgcccatg gcggggcata
     4261 tcgacgccgc cttgggcaag cgaccgaata tcaaagccaa tctgcggatc cccggaacgc
     4321 tcgatttcga tcattggctg ggcgtcgcgg cgagcccgcc gccggcgcag acggtggccg
     4381 cagccaggcc ggcggcaggt gctccggccg cggcgcctgt gctgccggtg cccgtcggtc
     4441 cgccgcgcgt ggcgaccggc aagccggtcg atctctcggc gctgcgcgcc ttcgacgcca
     4501 cgctgaacct cgagaccagc gccatcgcca tcgcctcgct caaggtgacc tacgccgaca
     4561 tgcaggcgag cctgcggaac ggcctcttca agatcgccaa gctcaccggc cagttctatg
     4621 gcggcgccgt cgatttcaac ggcacggtcg atgccggcaa ggataccctg gcgctcgacc
     4681 tcaagggcag cctgcagggc atctatctct ccgagatgct gcgcggcacc gccggcacca
     4741 acaacttcgg caaccagcac ctgatggtct cggtcgacgg caagatcacc gttatgaaca
     4801 tcgagctcaa gggcagcggc acgacgcccg agcagatccg caacacgctg agcggcagcg
     4861 gccaggtgag cggctatctc tacccggcgg tcgccggcgg ctcgctgggc ttcgcttcgt
     4921 tcgccaccgg cctaggcagc gtcttcagca ccgagatggg cttcaactcg gcggtgctgg
     4981 cgggtttcat caaccatcag agcccgatca cgggcgagct gctgctttcg ggcaatacgg
     5041 tgaccctgca gaaccacaag gtgcagggcc agaacgccat cgccctgatc accagccgca
     5101 cgagcctgac gcaagcgatt accgacacaa cgatcgcgct cgacaccggc cgccgcggcc
     5161 cggccgatta tgttatgacg gtgaagggcc cgatctcctc gccgaccatg agcacgcgcg
     5221 gcggcggcaa ctaggacgcg gcgctacgcc gcgcgggcct tcaggatgtc ccaggcctgg
     5281 cggaaggcct gcgccatttc cgccgccggc acggcgcccg agaacagcac atgaccctgc
     5341 agggcgaagc tcggcacgcc ctggatgccg cagctgtgcg ccttgcggtc ggccgccagc
     5401 acttcggtgc ggccgctatc gcccgacagc atcgccgtca cgtcatcgcg gtccagcccg
     5461 ccctcggcgc cgagcgccgc cagcaccttg tcgtcgccga tgtcggcgcc gttgccgaaa
     5521 tagccctcga acagcgcctc gacgacgcca tcctgcacgc ccttctggcc ggccagccgg
     5581 atcaggcggt gggcgttcaa ggtattgggc gtgcggctca gccgctcgag atggaagtcc
     5641 agcccgaccg cggcggcggt ctcggtgatg cgctcgtcga gctggcgcgc gcgctcggcg
     5701 ctgccgaact tggcgatgcg gtactgggtg cggtcgacgc cctcgctcgg catgtcggga
     5761 ttgagctgaa agggatgcca ggcgacggtg aagcgcagac gctggtgctc caggagatcg
     5821 agcgcgcgct cgagctggcg cttgccgatg taacaccacg ggcagatcac gtcggagatg
     5881 acgtcgatgc ggccaacagg ctgagcctga tccatggcgg tttccttccc tattgcgcag
     5941 aagcctatac ccgcgtcgaa tccccggcaa cgaggagacc cttatggaaa agcccgaata
     6001 ccgttctgcg ctgatcgttg gcactggccc ggggctcagc gcttcgctcg cccgcctatt
     6061 tgccaaaaac ggcctcgccg tttcagtggc tgcccgccag accgacaagc tcgctgcact
     6121 tgcgaaggag accggcgccg aggttcatgc ctgcaacgcc gccgatccga aggaagttgc
     6181 gggcctgttc gcggcgctcg atgcaggcgg gcgcaccgcg gacgtcgtgg tctacaacgc
     6241 cagcggccgg gtgcgcggtg cgctggtcga cctgccgccg gacgacgtca ggcgcgcgat
     6301 cgaggtcagc gccttcggcg gcttcctggt gtcccaacag gcggctcagc gcatggtgcc
     6361 caaagcgcat ggcgccatct tcctgaccgg cgccaccgcg ggcgtgaagg gcttcccgct
     6421 gtcgtcggcc tttgcgatgg gcaagttcgc cctgcgcggc ctggcgcagg cgatggcgcg
     6481 cgagctgtcg ccgcaaggca tccatgtcgc ccatttcgtg atcgatggcg gcatcaggag
     6541 cgcttcgagg ccggtgccgg ccaactcgcc cgacagcctg ctcgaccccg acgccatcgc
     6601 cgagacctac tgggcgacgc tccagcagca ccgcagcgcg tggagctggg aggtcgaggt
     6661 caggccgtgg gtcgagaaat tctagagttc gttctaagct cgatcgggaa aaccgcaccc
     6721 gggagaaaat tcatgcgcat ccataacatt tatgtcgacg acaagggcga gtcgcatttc
     6781 cgcgacatcg aggtcgaatg gaagcacgag ggccgcggcg gcaagacctc ggccaccttc
     6841 ccggcgaccg gcatcatctt ccgccagaca ccgggcagct acgactacga atggcatccc
     6901 gcgccacgcc ggcaatacat catcaacctc gacggcggcg tcagcatcca ggcgagcgac
     6961 ggcgagacgc gcatcatcgg cgcgggcgag gtgctgctgg tcgaggacgt cggcggcaag
     7021 ggccattttt ccaaggccgt ctcgggcaa
//
LOCUS       DASWGA010000123        16608 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1536498, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000123 DASWGA010000000
VERSION     DASWGA010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 16608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16608
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536498"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..283
                     /locus_tag="VF991_02920"
     CDS             152..283
                     /locus_tag="VF991_02920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555418.1"
                     /translation="MAIAFDAARADRGNGGSDGVNAGVVVGSGTDNHTLNPGVRLTW"
     gene            368..1111
                     /locus_tag="VF991_02925"
     CDS             368..1111
                     /locus_tag="VF991_02925"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEX9555419.1"
                     /translation="MQLQLKTWQFVEDYLKTKTGIIIPIGSTEQHGPTGLIGTDALTA
                     EMIGRGAGEKVGALVAPTISVGMAQHHLAFPGSVTLKPTTLIAVVRDTVMSLARHGFT
                     RFFFINGHGGNIATVTAAFSEIYAERSMEKLSNQPSLKCALRNWWDGAGIRQLQKELY
                     PSGEGSHATASEVALTWYKYPETMNRTQLEPRIAPNGSFADAEDYRRAFPDGRIGSDP
                     SQATPEHGKRFYDTAVEEVARDYEKWVAR"
     gene            complement(1333..1758)
                     /locus_tag="VF991_02930"
     CDS             complement(1333..1758)
                     /locus_tag="VF991_02930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555420.1"
                     /translation="MFVFVLSCLAAPAVFGQVFENIFENTNVPGIGPMRARVGVSPGP
                     LVQCEVRNRFPAGQKITTPLVAYIIADRTSTHTAPYTIEFIYILPGGPYISDVRSFRF
                     DEGVVRKCHTRQFDRGYAPFQFQWMFNGVEVGSLSFDKD"
     gene            complement(1894..2754)
                     /locus_tag="VF991_02935"
     CDS             complement(1894..2754)
                     /locus_tag="VF991_02935"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9555421.1"
                     /translation="MIDNTRGILAMSASVVVFIFNDALIKLAAESVPSVQAIGVRGVF
                     ATLWCTLALLATGAWRRIAMATQPQVLLRGGLEAAAAILYLVALFHIPFAIATAVNLS
                     TPLVLTVLAVLLLKEDVRWRRWSAVILGFLGVLLVIQPRPGDVNVWTWVALIGTFVGA
                     LRDVLTHYLPRGVPTLVVSFTTAATVAIAGCGGALLEGWQPMSWEGLGFIVASSLLLA
                     MGYQLLVLALRSGAEISVIGAFRYGSILWALAIGYIVWGDVPNTLALLGIAVIVGAGL
                     YILHRERLRR"
     gene            complement(2751..3161)
                     /locus_tag="VF991_02940"
     CDS             complement(2751..3161)
                     /locus_tag="VF991_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014892257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEX9555422.1"
                     /translation="MAHWLLKSEPSAYSWAQLVKDKHTSWTGVRNPQASINLKAMKPG
                     DRCFFYHSGEGKEIVGIAEVVKPAYPDPTDKAGKAVTVDIKAVQPVTQPVTLAAVKAD
                     PKFKDFKLVRQSRLSVVPVSDEHWKLLLKMSATK"
     gene            complement(3175..4164)
                     /locus_tag="VF991_02945"
     CDS             complement(3175..4164)
                     /locus_tag="VF991_02945"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEX9555423.1"
                     /translation="MNGVSHIGVVGGGAWGTALACLGRRAGRRVTLWSRDPAVANAIA
                     HDRANPVYMPGQPIDEGIEAAVDLVALADCDVLLLVCPAQAVRELGARLPGEAPVVIC
                     AKGIETSTGLLMPEVLAEVLPGRSLAMLSGPSFAEEAMGGLPTAVSIATWDEGLGRRL
                     AGSLAAGAFRPYWSHDVLGVALGGAVKNVLAIAAGIVEGRGLGHNAAAALVTRGFAEM
                     ARLGQAMGADLETLTGLSGLGDLVLTCHGPQSRNRALGVALGKGTPLARHMDGRRQVV
                     EGEATAPAVLARAARQRIEMPICAAVDAILHRGADLDEAIRALLARPLRREGE"
     gene            complement(4175..4801)
                     /locus_tag="VF991_02950"
     CDS             complement(4175..4801)
                     /locus_tag="VF991_02950"
                     /inference="COORDINATES: protein motif:HMM:TIGR02466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase family protein"
                     /protein_id="HEX9555424.1"
                     /translation="MSTGPEIITLFGTPVIISDVPDAATLNAELRKTIEQRQQSHPGT
                     QHSNLGGWQSSWDMDRWGGAAAIKLLAIGRNTANRMTTDRQGKPVATTWRANMWANVN
                     KSGHGNEFHSHPGSFWSGVYYVDDGGIAADPSLGGELEFMDPRGPGPAMYAPHLAFAM
                     PGGLSVGANETVPPKSGRLVMFPAWLLHQVRPYRGAAERISIAFNLSL"
     gene            complement(4811..5848)
                     /gene="tsaD"
                     /locus_tag="VF991_02955"
     CDS             complement(4811..5848)
                     /gene="tsaD"
                     /locus_tag="VF991_02955"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012091158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEX9555425.1"
                     /translation="MRVMGIETSCDETAVAIVEAPTGEGPVGAILADVIYSQLIEHRR
                     FGGVVPEIAARAHLERIDGLVEEALETAGLGLGELDAIAATGGPGLIGGVMVGVMTAK
                     ALAFAHDKPFLAINHLEGHALSVRLTEDVAFPYLLLLVSGGHCQLLSVRGPGDFTRLG
                     TTIDDAVGECFDKTAKLLGLGFPGGPAVERAAKGGDPQRFALPRPMWRKPGCDFSFSG
                     LKTAVRQTVEKLDTADARAIADLCASFQRTVGDVLVDRCGNALAMSPLPILVVAGGVA
                     ANLHLRGRLEALAAQHGARLVAPPIKLCTDNGAMIAWAGIEHLRLGRTDALDFKPRPR
                     WPLDPAASVRV"
     gene            5895..6824
                     /gene="hemC"
                     /locus_tag="VF991_02960"
     CDS             5895..6824
                     /gene="hemC"
                     /locus_tag="VF991_02960"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEX9555426.1"
                     /translation="MAAPLLRLGTRGSKLALTQAGLVRDALAAAVPALAAPGAIEIVA
                     IRTTGDAIQDRPLAEAGGKGLFVKEIEEALLDRRIDVAVHSMKDMPVTQPPGLVISAF
                     LPREDARDVLIAGDITRIANLRQGAIVGTSALRRRAQLLHRRPDLRIVNLRGNVDTRL
                     AKREAGIVEATVLALAGLKRLGVAHVGTPVPEDEMLPAVGQGAVCIECRADDAATRAS
                     LAAINDAATATCVAAEHAMLAVLDGSCRTPIAGHAVLTTEGTLYLRGLIAKPDGSEMI
                     VTERRGAAADAEAIGRDAGDELKRRGGPGFLST"
     gene            6852..7667
                     /locus_tag="VF991_02965"
     CDS             6852..7667
                     /locus_tag="VF991_02965"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEX9555427.1"
                     /translation="MRPGPRSLSALCGAVALLAGCESAPVTGRSQMMLVSESEERQMG
                     LRAYQQVLSKESLSYDTETNALVEKVGRRIAAAAERPPNELWRAPHFRWEFKTVAKNE
                     PNAFCLPGGKVVVYTGILPITKTEAGLAVVIGHEVAHALARHGAERMSDQIVAQVGAT
                     AAAVALSSTVSGRSRAYLPAMMAALGAGATVGFILPMSRAQESEADRIGLVLMARAGY
                     DPREAIGVWERMHAASTGRRQAEWLSTHPADTTRLNDIRQWLPEAMKYYRPQS"
     gene            7664..7903
                     /locus_tag="VF991_02970"
     CDS             7664..7903
                     /locus_tag="VF991_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEX9555428.1"
                     /translation="MTDTLEYDATGLLCPLPVLRANRKLRELPAGGLLTVRATDPAAE
                     QDFPAYCRQTGHELVSSRREGEVLIFVIRKRPAQE"
     gene            7908..9113
                     /locus_tag="VF991_02975"
     CDS             7908..9113
                     /locus_tag="VF991_02975"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEX9555429.1"
                     /translation="MPGTTFKTLDDLDVSGKHVLVRVDLNVPMKGGKVTDATRIERAA
                     PTLGELAARGARVIVLSHFGRPDGKRVPEMSLRPLVEPLSKVLGKPVAFAEDCVGPLA
                     EEAVRSLKPGEVLLLENLRFHKEEEKNDAGFIDKLSVLGDVYVNDAFSAAHRAHASTE
                     GLANRLPAAAGRLMQTELEALDKALGNPKRPVCAVVGGAKVSTKLDLLGNLVGRVDKL
                     IIGGGMANTFLHAQGIKVGKSLSEKDLAPTALDILAKAKAANCKVLLPVDAVVAPEFK
                     ANAPHQVVDVHACPDDQMILDIGPKSIALYVAELDDCATLVWNGPLGAFEMKPFDAGT
                     VALAEAVARLTSAGKLLSVAGGGDTVAALAAAGVEEKFSYVSTAGGAFLEWMEGKTLP
                     GVAALVRAA"
     gene            9123..9719
                     /locus_tag="VF991_02980"
     CDS             9123..9719
                     /locus_tag="VF991_02980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX9555430.1"
                     /translation="MSTPPLPDRPRLPWDPPDHFEKRIPDGDNRERLVCARCEFIHYQ
                     NPKIVAGAVCTWGDRILLAKRAIEPRKGFWTVPAGYMELGETTEQAAEREAREEACAT
                     IEIDRLLAMYSVARIGQVQIMYRARLASADVAPGIESEDVALLDWADIPWEQLAFPTV
                     VWALAHFHESRGKIDFPTYSNPTGDLARLWPPRKPAGV"
     gene            9775..11103
                     /locus_tag="VF991_02985"
     CDS             9775..11103
                     /locus_tag="VF991_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX9555431.1"
                     /translation="MLTAANNEMLTRVGPGAPMGNLMREYWIPACLSSELKADGEPMR
                     LLLLGEQLIAFRDTDGRVGIMEHRCPHRCASLFFGRNEEGGLRCIYHGWKFDVEGNCL
                     DMPNVPPSQDFKHRIKAKAYKVVERSGFIWTYMGPRAEAPPLPTIEILMLPEEERLTR
                     VHQRECNWFQSLEGDIDTSHFGFLHIGGLKMEDVDPSTIHRWGVGDRAPEYKATETEW
                     GTMYAAYRPADPGNYYYRFAHFLFPFITFTPNGSFEDQVACTMNVPMDDTHTMTYNLA
                     WKKKTRPLETLKNGEWIPGLAPDMQYLPNTNDWYGRHRLVARRENDYFVDRDMQKNVN
                     YTGIQGIGRQDQAAVECMGEIVDRTLEHLAPSDRMIALTRKRLLAAAQELVNEKKVPA
                     TVDNPDIYRGARGGAFIAPTSVDWLDAYAEKLQTAKSPLGMLTRMALAAE"
     gene            complement(11104..11691)
                     /locus_tag="VF991_02990"
     CDS             complement(11104..11691)
                     /locus_tag="VF991_02990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEX9555432.1"
                     /translation="MSERTGEESGMRRLYATALELGPLLLFFVVNGRWGIFVGTGVFI
                     VATAIALPCYRWLEKRWPVMPLVGGFFVLVFGGLTIWLQDDTFIKLKPTIVNCLFGVI
                     LGGGLLFLHRPLLKPIFGAAFRLTDEGWRKLTVRWALFFFVLAAINEVMWRGFSTDTW
                     IASKMLLSFPLTLVFAFLQVPLLKRHWDGANNPFA"
     gene            complement(11702..12661)
                     /gene="ftsY"
                     /locus_tag="VF991_02995"
     CDS             complement(11702..12661)
                     /gene="ftsY"
                     /locus_tag="VF991_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEX9555433.1"
                     /translation="MSDTMQPDAGETEKKGWLSRLRSGLAKSTKRVTESITGLFTKKT
                     LDQQTLDQLEDALIEADLGVSVAARLVDKLGKERFGKEVTDEEVRAAFADDIAEILQP
                     VATPLSIDPSRKPHVVLVVGVNGSGKTTTIAKLANLYKREGRKVMLAAGDTFRAAAVE
                     QLKVWGDRAGVPVIAKDAGADAAGLAYEALERAKADRCDVLLIDTAGRLHNKSNLMDE
                     LAKIVRVLAKLDPEAPHSCLLVLDATTGQNAHAQVETFKTLSPVDALVVTKLDGSAKG
                     GVLVALAEKFKLPVVAIGVGEGIDDLRPFEARAFARGLMGLPA"
     gene            complement(12671..13519)
                     /gene="dapF"
                     /locus_tag="VF991_03000"
     CDS             complement(12671..13519)
                     /gene="dapF"
                     /locus_tag="VF991_03000"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEX9555434.1"
                     /translation="MAKAVFLKMHGLGNDFVLLDARNAAFDLTPARRRAIADRRRGVG
                     CDQLIVLEKPTEHEADVFMRIYNPDGGEAGACGNATRCVASVLMEERQTDHVTVQTVS
                     GLLDSQKAGIAADGLPVISVDMGLARLDWRDIPVSEACDTNHMPVGLGPLQDPVGTSM
                     GNPHATFFVDDAAAIPLGELGPKLERHQFFPERANIGVAQLVDEDRLRLRVWERGAGL
                     TLACGSGACAAVVAATRRGLVKRKAQVIVDGGTLAVEWLRDDHVLMTGAIALAFKGEL
                     DPSLLA"
     gene            complement(13526..14452)
                     /locus_tag="VF991_03005"
     CDS             complement(13526..14452)
                     /locus_tag="VF991_03005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555435.1"
                     /translation="MAGDSKALIGHPAQVSERIIVITGGDAGYFDLMKDCIGSLRATS
                     EGRDLALGILDCGLADEQRTWCREQGGMLAVPDWDFDFPGRDKLSDGYKALTARPFLP
                     RYFPGFDLYLWIDGDCWVQQGDAISLFLAAARTGALAVAPEIHRAMRHYHHAWGEFSA
                     VCGAAYESCFDKATAERLIRYPMINAGVFALKAQAPHWAGWADIYRQALQRSTDLTDQ
                     LALNVLVYDKGFPYEPLPSRCNWPVHHATPAWDAERGLFVEPVMPYEPLGILHLTIYT
                     KRLAALDVRERGGPRDGQVRRRSLRWPGRTAI"
     gene            14481..15083
                     /locus_tag="VF991_03010"
     CDS             14481..15083
                     /locus_tag="VF991_03010"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HEX9555436.1"
                     /translation="MAKHIDYYVSLNSPWTYLGSKRFEAIVKKHGAHVTIWPVDFGSV
                     FAVSGGLPLPKRAPQRQAYRMMELKRWRDHLGVPLNLEPKFFPANEVPAAKCVIALRE
                     LGRMPDAIKLAHAVLHALWAEEKDTGDPATLQAIVAGCGLDVATVIKASEAPHMAEKR
                     ESYTKFAIDRGVFGAPSFVIGGEIFWGQDRLDFVDRKLAA"
     gene            complement(15084..15740)
                     /locus_tag="VF991_03015"
     CDS             complement(15084..15740)
                     /locus_tag="VF991_03015"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CAAX endopeptidase family protein"
                     /protein_id="HEX9555437.1"
                     /translation="MAAYHNPLIQQGLPPIRGWSILIFLAAVPLLLVPAVWLARDWGM
                     LALIATFFAVGLIAVALAVAPMGRTALPALGFRPAGWRPIVLGTLGTVVVSVAVSQIG
                     LEPQGVKEALEIARDPALFVATLAALAGLAPLVEELVFRGLLYGWLAGRWGTVVAWIV
                     SSLAFAAAHIELAHVILVLPLGLWFGWLRRRTGSLWPSLVSHMVNNGLAVVAAALLDI
                     "
     gene            15885..>16608
                     /locus_tag="VF991_03020"
     CDS             15885..>16608
                     /locus_tag="VF991_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HEX9555438.1"
                     /translation="MFEGLSKRLGDVFDKLRGRGALSEADVDAALREVRTALLEADVA
                     LPVVRQFIDSVRPQAIGADVIRSVTPGQMVIKIVNDHLVEMLGGTVADLDLNAVPPVV
                     ILMVGLQGSGKTTSSAKIAYRLSQGPQGMAAEMFGGSFATKHKVMMASLDTRRPAAQQ
                     QLAVLGQQTGVPTLPIVPLEMPLAITRRALETARREGFDVLILDTAGRLSIDEVLMKE
                     VADISDLAKPKETLLVADAMTGQ"
BASE COUNT         2913 a         5638 c         5505 g         2552 t
ORIGIN      
        1 ttgccgggtc gctttgaccg ctgtcggccc gccgtcgccc ggtgcgatcc tcaatgtcag
       61 cgtgcgctcg gccgataaca gtaccgacta ccgccagcgc gcataaggac cttggtcggc
      121 ggcggcattg taagcgggga ctttcctgac gatggccata gcctttgatg ccgcgcgggc
      181 cgatcgtgga aatggcggtt cggacggggt caatgccggc gtcgtcgtcg gctcgggcac
      241 cgacaaccac acgctcaatc cgggcgtgcg ccttacctgg tagcggcaac ggcccgcacc
      301 tacagatgtc cttgtcaccc ttcaccaagc gacgcattct ccggcaaatc gcaaggagtt
      361 acgcgtcgtg cagcttcagc tcaagacttg gcaattcgtc gaggattatc tcaagaccaa
      421 gaccggcatc atcattccca tcggctcgac ggagcagcac ggcccgaccg gcctgatcgg
      481 caccgatgca ctgaccgccg agatgatcgg ccgtggcgcc ggcgagaagg tgggcgcgct
      541 ggtggcgccg accatttccg tcggcatggc gcagcatcat ctggctttcc cgggttcggt
      601 gacgctcaag cccacgaccc tgatcgcggt ggtgcgcgac accgtgatgt cgctggcccg
      661 ccacggcttc acccgcttct ttttcatcaa cggccatggc ggcaacatcg ccaccgtgac
      721 cgcggccttc tccgagatct acgccgagcg gtcgatggag aagctcagca accagccctc
      781 cctcaagtgc gcgctgcgca attggtggga cggggcgggc atccggcagc ttcagaagga
      841 gctctacccc agcggcgaag gcagccatgc caccgcctcg gaagtggcgc tcacctggta
      901 caagtacccc gagacgatga accgaaccca gcttgagccg cgcatcgcgc ccaacggttc
      961 gttcgctgac gccgaggatt accggcgcgc cttccccgac ggccgcatcg gctccgatcc
     1021 cagccaggcc acgcccgagc atggcaagcg cttttatgac accgcggtcg aggaagtagc
     1081 gcgcgactac gagaagtggg tggcgcgcta agacgcatgc tcatggcggc cacgcagcct
     1141 cggggctcat cgtcgtcacc aatcggagcc atcgagagcc gcgagcacgc gtgccacgcg
     1201 cagggtgccc gctcggccaa gaggccggcg ctctggtcgg actcgacgac catgagcttg
     1261 ccctggcggt caagctcggc caggcgctcg cgctgcccca accgcctgaa ttcggggagg
     1321 aagttacaat tgctagtctt tgtcgaacga cagagagccg acttcgacgc cgttgaacat
     1381 ccattggaac tggaacggcg cgtagcccct atcgaattgc ctggtgtgac atttcctgac
     1441 gacaccctcg tcgaaacgaa aacttcgtac gtcgcttatg tacgggccgc ccggcaggat
     1501 gtagataaat tcgattgtat agggtgccgt gtgcgtgctg gtgcgatcgg cgatgatata
     1561 ggcgacgagc ggcgtcgtga tcttctggcc ggccggaaag cggttgcgta cctcgcactg
     1621 aaccagcggg ccaggactca cgcccactcg tgccctcata ggtccgatgc ccggcacatt
     1681 ggtgttttca aagatatttt caaagacctg gccgaacacc gccggcgccg ccaggcaaga
     1741 gagcacgaac acaaacaccc agcttctcat gtgctttccc cacggccccg agcttaccca
     1801 gcacccgggc gcacggccag tcggcgagat cgacctggcg agccaaggtc ccgggatagg
     1861 cgaagcccgc ctgccggccc gcatccggca agctcagcgc ctgagtcgtt ctcggtgcag
     1921 gatgtagagg ccggcgccca cgatcacggc aatgccgagc aaggccagcg tattcggcac
     1981 gtcgccccac acgatatagc cgatggcgag cgcccacagg atcgagccgt agcgaaaggc
     2041 gccaatcacc gagatctcgg cgcccgaacg cagcgccagc acaagcaact ggtagcccat
     2101 cgccagcagc agcgaggagg cgacgatgaa gcccagcccc tcccagctca tcggttgcca
     2161 accctcgagc agcgcgccac cgcagccggc tatggcgacg gtcgccgcgg tggtgaagga
     2221 gacgaccagc gtcggcacac cgcgcggcag atagtgagtc agcacatcgc gcagggcgcc
     2281 gacgaaggtg ccgatcagcg ccacccaagt ccagacattg acgtcgccgg gccggggctg
     2341 gatcaccagc agaacgccta aaaatcccag gatcaccgcg ctccagcgcc gccagcggac
     2401 atcctccttc aacagcagca cggcgagcac ggtgagaacc agcggcgtcg acaaattgac
     2461 cgcggtcgca atggcaaacg gaatgtggaa cagcgccacc aggtaaagga tggcggctgc
     2521 cgcctcgagg ccgccgcgta gcagcacctg cggctgggtc gccatcgcga tccgccgcca
     2581 cgcgccggta gccagcaggg cgagcgtgca ccacagcgtg gcgaagacgc cgcgcacgcc
     2641 gatcgcctgg accgaaggca ccgattcggc cgcgagtttg atcaaggcat cattgaagat
     2701 gaagaccacg accgacgccg acatcgcgag gatgccgcgg gtgttgtcga tcacttggtt
     2761 gcggacatct tcagcagaag cttccagtgc tcatcgctga ccggcaccac cgagagccgc
     2821 gactggcgaa ccagcttgaa gtccttgaac ttggggtcgg ccttgacggc ggccaaggtc
     2881 accggctgcg tgaccggctg cacggccttg atatcgacgg tcacggcctt tcccgccttg
     2941 tcggtcggat cgggataggc cggcttgacg acctcggcga tgccgacgat ctccttgccc
     3001 tcgcccgaat gatagaaaaa acagcgatcg cccggcttca tcgccttgag attgatcgag
     3061 gcctgcgggt tgcgcacgcc ggtccacgag gtgtgcttgt ccttcaccaa ctgcgcccac
     3121 gagtaggccg acggctcgga cttcagcagc caatgcgcca tgttccgccc ctcctcattc
     3181 gccctcgcgc cgcagcggcc gcgccagcaa ggcacggatc gcctcgtcga gatcggcgcc
     3241 gcgatgcagg atagcatcga cggcggcgca aatcggcatc tcgattcgct gccgcgcggc
     3301 gcgcgccagg acggccggcg ccgtcgcttc gccttcgacg acctggcggc gtccgtccat
     3361 atggcgggcc agcggcgtgc ccttgccgag cgccacgccg agggcgcggt tgcgcgactg
     3421 cgggccgtgg caggtcagca cgaggtcgcc cagcccgctc aggccggtca aggtttcgag
     3481 gtcggcgccc atcgcctggc cgagccgcgc catttcagcg aaaccgcgcg tgaccagcgc
     3541 ggcggcggcg ttgtgaccca gcccgcggcc ttcgacgatg ccggcggcga tggccagcac
     3601 gttcttgacc gcaccgccca gtgccacgcc cagcacgtcg tggctccagt agggccggaa
     3661 ggcgccggcc gccagcgagc cggccagcct gcggcccagg ccctcgtccc aggtggcgat
     3721 gctgaccgcc gtcggcaaac cgcccatcgc ctcctcggcg aagctcggtc ccgacagcat
     3781 cgcgaggctg cgaccgggca gcacctcggc cagaacttcg ggcatcagca gtccggtcga
     3841 ggtctcgatg cccttggcgc agatcaccac cggcgcctcg cccggcaggc gcgcgccgag
     3901 ctcgcgaacg gcctgtgccg gacagaccag cagcagcacg tcgcaatcgg cgagcgctac
     3961 gagatcgacg gccgcctcga tgccctcgtc gatcggctgg cccggcatat agaccggatt
     4021 ggcgcggtcg tgggcgattg cgttggcgac ggcagggtcg cgcgaccaca aggtcacccg
     4081 ccgcccggcg cgacggccca ggcaggcgag ggcggtgccc caggcgccgc cccccaccac
     4141 gccgatatgg cttacaccgt tcacgggatg gcgctcacag gctgaggttg aaggcgatgg
     4201 aaatgcgctc ggcagcgccg cgatagggcc gcacctgatg cagcagccag gccgggaaca
     4261 tcaccagccg gccggacttg ggcggcaccg tctcgttggc gccgaccgac aggccgcccg
     4321 gcatggcgaa ggcgagatgc ggcgcgtaca tcgccggacc cggaccgcgc gggtccatga
     4381 attccagctc gccgcccagc gacggatcgg cggcgatgcc gccgtcgtcg acatagtaga
     4441 cgcccgacca gaagctgccg ggatgggaat ggaactcgtt gccatgcccg ctcttgttga
     4501 cattggccca catgttggcg cgccacgtcg tggccaccgg cttgccctgg cgatcggtcg
     4561 tcatgcgatt ggccgtgtta cggccgatcg ccaaaagttt gatcgccgcc gcgccgcccc
     4621 agcgatccat gtcccagctc gattgccagc cgccgagatt ggaatgctgg gtgccgggat
     4681 gcgactgttg acgctgttcg atcgtcttgc gcagctcggc attgagagtc gccgcatcgg
     4741 gcacgtccga gatgatcacc ggcgtgccga acagcgtgat gatctcgggg ccggtgctca
     4801 tatcgccact ctacacccgg accgacgcgg cggggtcgag cggccagcgc ggccgcggct
     4861 tgaagtcgag cgcgtcggtg cggcccaatc gcaggtgttc gatgccggcc caggcgatca
     4921 tggcgccgtt gtcggtgcag agttttatcg gcggcgcgac cagacgagcg ccatgctggg
     4981 cggcgagcgc ttccaggcgg ccgcgcagat ggagattggc cgcgactccg ccggccacga
     5041 ccaggatcgg caggggcgac atcgccagcg cattgccgca gcggtcgacc aggacgtcgc
     5101 cgacggtgcg ctggaacgac gcacagagat cggcgatggc gcgcgcgtcg gccgtatcga
     5161 gcttctcgac cgtctggcgc accgccgtct tgaggccgga gaacgagaag tcgcagcccg
     5221 gcttgcgcca catcggccgc ggcaaggcaa agcgctgcgg gtcgccgccc ttggcggccc
     5281 gctccaccgc gggtccgccg ggaaagccca ggcccagaag cttcgccgtc ttgtcgaagc
     5341 actcgcccac cgcatcgtcg atcgtcgtgc cgagccgcgt gaagtcgccg ggtccgcgca
     5401 cgctcaggag ctggcagtgg ccgcccgaga ccagcagcag caggtaggga aaggccacgt
     5461 cctcggtcag ccgcaccgac agcgcatggc cttcgagatg gttgatggcg aggaagggct
     5521 tgtcgtgcgc gaaggccagc gccttggcgg tcatcacccc taccatcacg ccgccgatca
     5581 accccggacc gcccgtggcg gcgatggcat caagttcgcc aagcccaagg ccggcggtct
     5641 cgagcgcctc ctcgactagc ccatcgatgc gttcgagatg ggcgcgcgcg gcgatctccg
     5701 gcaccacgcc gccgaaccgc cgatgctcga tcaattggct atagatcaca tcggccagga
     5761 tcgcgcccac gggcccctcg cccgtcggcg cctcgacgat ggcgacggcc gtttcgtcgc
     5821 agctcgtttc gattcccatc acgcgcatgg gtgtcttcta gcctcggcgg ctgacctacg
     5881 ctagagcagg cgccatggcg gctcctcttc tgagactcgg cacgcgcggc agcaagcttg
     5941 ccttgaccca ggccggcctg gtgcgcgacg cgctcgccgc cgcggtgccc gcgctggccg
     6001 cgcccggcgc catcgagatc gtcgccatca ggaccacggg cgatgccatc caggaccggc
     6061 cgctggccga agccggcggc aagggcctgt tcgtcaagga gatcgaggag gcgttgctcg
     6121 accgtcgcat cgatgtcgcg gtccatagca tgaaggacat gccggtgacg cagccgccgg
     6181 ggttggtcat ctcggccttc ctgccgcgtg aggatgcgcg tgatgtcctg attgccggcg
     6241 acattacgcg catcgcgaac ctgaggcagg gcgccatcgt cggcacctcg gcgttgcgcc
     6301 ggcgcgccca gctcctgcat cggcggcccg acctgcggat cgtcaatttg cgcggcaacg
     6361 tcgacacaag gctcgccaag cgcgaggccg gaatcgtcga agcgacggtg ctggccttgg
     6421 ccggattgaa gcggctcggc gtggcccatg tcggaacgcc ggtgccggaa gacgagatgc
     6481 tgcccgccgt cggccaaggc gcggtctgca tcgaatgtcg cgccgacgat gccgcgacac
     6541 gagcatcgct ggcggcgatc aatgatgccg cgacggcgac ctgcgtggca gccgagcacg
     6601 ccatgctcgc cgtactcgac ggctcgtgcc gcacgccgat cgccggccac gctgttctca
     6661 caaccgaggg cacgctctat ttgcgcggcc tgatcgccaa gcccgacggc tcggaaatga
     6721 tcgtcaccga acgtcgcggc gcggccgccg atgccgaagc gatcggccgt gacgcgggag
     6781 acgaactcaa gcgccgtggc ggtccgggct tcctctcgac ctgatggcgt cccgacacta
     6841 gagtcgggcg catgcgtcct ggcccacgat ccctgtcagc gctgtgcggc gcggtcgctc
     6901 tcctcgccgg ctgcgagtcc gcgccggtca ccggccgctc gcagatgatg ctggtgagcg
     6961 agagcgagga gcgccagatg ggcctgcggg cctatcagca ggtgctgtcc aaggaatcgc
     7021 tgtcctatga cacggagacc aacgcgctgg tggagaaggt cggccggcgc attgccgcgg
     7081 cggccgagcg gccgcccaac gagttgtggc gggcgccgca ctttcgttgg gaattcaaga
     7141 ccgtcgccaa gaacgaaccg aacgccttct gcctgcccgg cggcaaggtc gtggtctata
     7201 ccggcatcct gccgatcacc aagaccgagg cgggcctggc cgtcgtgatc ggccatgaag
     7261 tggcgcacgc gctggcacgc cacggtgcgg agcgcatgag cgaccagatc gtggcgcagg
     7321 ttggcgcgac ggccgccgcg gtcgcgctct cgtcgacagt gagcgggcgc agccgcgcct
     7381 atctgccggc gatgatggcg gcgctcggcg ccggcgccac cgtgggcttc atcctgccga
     7441 tgtcgagggc gcaggaatcg gaggccgacc gcatcggcct cgtgctgatg gcgcgggccg
     7501 gctacgatcc gcgcgaggcg atcggggtgt gggaacgcat gcacgccgcc agtaccggcc
     7561 gccgccaagc ggagtggctg agcacgcacc ctgccgatac cacgcggctc aacgacattc
     7621 gccagtggct gcccgaagcc atgaagtatt atcggcctca atcgtgaccg acacgctcga
     7681 atacgacgcc acggggctgc tctgcccgct gccggtgctg cgcgccaacc gcaagctgcg
     7741 cgagctgccg gccggcggcc tgctcaccgt gcgcgccacc gatccggccg ccgagcagga
     7801 cttccccgcc tattgccggc agacgggcca tgaactggtt tcgagtcggc gcgagggcga
     7861 ggtcctgata ttcgtcatcc gcaaacgtcc agcccaagag taggtgcatg cctgggacaa
     7921 ccttcaagac gctcgacgac ctcgatgtct ccggcaagca cgtgctggtg cgcgtcgacc
     7981 tcaacgtgcc gatgaagggc ggcaaggtga ccgacgccac gcgcatcgag cgcgccgcgc
     8041 cgacgctcgg cgaactcgcc gccaggggcg cccgggtgat cgtgctcagc catttcggcc
     8101 ggcctgacgg caagcgcgtg cccgagatgt cgctcaggcc gctggtcgag ccgttgtcca
     8161 aggtgctcgg caagccggtg gcgttcgccg aggattgcgt cggcccgctc gccgaagagg
     8221 ccgtgcgcag cctgaagccc ggcgaggtgt tgctgctgga gaatctgcgc ttccacaagg
     8281 aagaggaaaa gaacgacgcg ggcttcatcg acaagctgtc ggtgctgggc gacgtctatg
     8341 tgaacgacgc gttttctgcc gcgcaccgcg cacatgcctc gaccgagggc ctcgccaacc
     8401 gcctgccggc cgccgccggc cggttgatgc agaccgagct cgaggcgctc gacaaggcgc
     8461 tgggcaatcc caagcggccg gtctgcgccg tggtcggcgg cgccaaggtg tccaccaagc
     8521 tcgacctttt gggcaacctc gtcggtcgcg tggataagct gatcatcggc ggcggcatgg
     8581 ccaacacctt cctgcatgcc caggggatca aggtcggcaa gtcgctgagc gaaaaggacc
     8641 tggcgccgac ggcactcgac atcctggcca aagcgaaagc cgccaactgc aaggtgctgc
     8701 tgccggtcga tgccgtggtc gcacccgagt tcaaggccaa cgcgccgcat caggtggtcg
     8761 acgtccacgc ctgccccgac gaccagatga tcctcgatat cggccccaag tcgatcgccc
     8821 tctacgtcgc agaactcgac gactgcgcca ccctggtttg gaacggaccg ctcggcgcct
     8881 tcgagatgaa accgttcgac gccggcacgg tggcgctggc cgaggccgtg gcgcggctca
     8941 ccagtgcggg caagctttta tcggtggcag gcggcggcga cacggtggcc gccctggccg
     9001 ccgcgggcgt cgaggagaaa ttctcctacg tctcgacggc cggcggcgcc ttcctggaat
     9061 ggatggaggg caagaccctg cccggcgttg cggctctggt acgggcggcg taagagcggg
     9121 cgatgagcac gcctcctctg cctgatcgtc cgcggctgcc atgggacccg ccggaccatt
     9181 tcgagaagcg cattcccgac ggcgacaacc gcgagcggct ggtgtgcgcg cgttgcgagt
     9241 tcatccatta ccagaatccc aagatcgtcg ccggcgccgt ctgcacctgg ggcgatcgca
     9301 tcctgctcgc caagcgagca atcgagccgc gcaagggttt ctggaccgtg ccggcgggct
     9361 acatggagct cggcgagacg acggaacagg ccgccgaacg cgaggcgcgc gaagaggcct
     9421 gcgcgacgat cgagatcgac cgcctgctgg cgatgtacag cgtggcccgc atcggccagg
     9481 ttcagatcat gtatcgcgcg cgtctcgcca gcgccgacgt ggcgcccggc atcgaaagcg
     9541 aggatgtggc gctgctcgac tgggccgaca ttccctggga gcagcttgct ttcccgaccg
     9601 tcgtctgggc gctcgcgcat ttccacgagt cgcgcggcaa gatcgatttt ccgacctact
     9661 caaaccccac aggtgatctc gcccgcctgt ggccgccgcg caagccggcg ggagtctagc
     9721 gtttgacaag gagagtgtgc gacctttggt aaaccgagga ctctggagga agccatgctg
     9781 actgcagcca acaacgagat gctgacgcgc gttggaccgg gcgcgcccat gggcaatctg
     9841 atgcgggaat actggattcc cgcctgtctt tcctccgagt tgaaggccga cggcgagccg
     9901 atgcggcttt tgctgttggg cgaacagctc atcgccttcc gcgacaccga cggccgggtc
     9961 ggcatcatgg agcatcgctg cccgcatcgc tgcgcctcgc tgttcttcgg gcgcaacgag
    10021 gaaggcggcc tgcgctgcat ctatcacggc tggaagttcg acgtggaagg caactgcctc
    10081 gacatgccga acgtgccgcc atcgcaggac ttcaagcatc gcatcaaggc caaggcctac
    10141 aaggtggtcg agcgctcagg cttcatctgg acctacatgg gcccgcgcgc cgaggcgccg
    10201 ccactgccca ccatcgagat cctgatgctg cccgaggagg agcgcttgac gcgcgtgcac
    10261 cagcgcgagt gcaactggtt ccagtcgctc gaaggcgata tcgacacgtc gcatttcggc
    10321 ttcctgcata tcggcgggct gaagatggag gatgtcgatc ccagcaccat ccatcgctgg
    10381 ggcgttggcg accgcgcgcc cgaatacaag gcgacggaaa ccgagtgggg gacgatgtac
    10441 gcggcctacc ggccggccga tcctggcaac tactactacc ggttcgcgca cttcctgttc
    10501 ccgttcatca cctttacgcc gaacggctcg ttcgaggacc aggtcgcatg cacgatgaac
    10561 gtgccgatgg atgacacgca caccatgacc tacaacctcg cctggaagaa gaagacgcgg
    10621 cccttggaga cgctgaagaa cggcgagtgg atcccgggcc tcgccccgga catgcagtat
    10681 ctgccgaaca ccaacgactg gtacggccgc caccggctcg tggcgcgccg cgagaacgat
    10741 tacttcgtcg accgcgacat gcagaaaaat gtcaactaca cgggcatcca gggcatcggc
    10801 cgccaggatc aggcggcggt ggaatgcatg ggcgagatcg tcgaccgcac gctcgagcat
    10861 ctggcgccgt ccgaccgcat gatcgcgctg acccgcaagc gcctgctggc ggcagcgcag
    10921 gagctcgtga acgagaagaa ggtcccggcc acggtcgaca atcccgacat ctatcgcggc
    10981 gcccgcggcg gagcattcat cgcaccgacg agcgtcgact ggctcgatgc ctatgccgag
    11041 aagctgcaga ccgcgaaaag tccgctgggc atgctgacaa gaatggccct ggcggccgag
    11101 tagctaggcg aacgggttgt tggcgccgtc ccagtggcgt ttcagcagcg ggacctgcag
    11161 gaaggcgaag acgagcgtga gtggaaagct cagcagcatc ttgctggcga tccaggtgtc
    11221 ggtcgaaaag ccgcgccaca tgacctcgtt gatcgccgcc agcacgaaga agaacagcgc
    11281 ccagcgtacg gtgagcttgc gccagccctc gtcggtcagc ctgaaggccg cgccgaagat
    11341 cggcttgagc agcggccgat gcaggaacag caggccgccg cccagaatca cgccgaacag
    11401 gcagttcacg atcgtgggtt tcagcttgat gaaggtgtcg tcctgcagcc agatcgtcag
    11461 cccgccgaac accaggacga agaagccgcc gaccagcggc atcaccggcc agcgcttttc
    11521 gagccagcga tagcagggta gcgcgatcgc cgtcgccacg atgaacacgc cggtgccgac
    11581 gaagatgccc cacctgccgt tgacgacaaa gaacagcagc agcggcccca gctcgagtgc
    11641 cgtcgcatag aggcggcgca tgccgctttc ctcgcccgtc cgttcgctca tgcccgttca
    11701 ctcatgccgg caaccccatc aacccgcggg cgaaggcccg cgcctcgaac ggccgaagat
    11761 cgtcgatgcc ttcgccgacg ccgatggcga ccaccggcag cttgaatttc tcggccagcg
    11821 ccaccagcac gccgcccttg gcgctgccgt cgagcttggt caccaccagg gcgtcgaccg
    11881 gcgacagggt cttgaaggtc tcgacctggg cgtgggcgtt ctggccggtc gtggcgtcga
    11941 gcaccagcag gcaggaatgc ggcgcctcgg ggtcgagctt ggcgagcacg cgcacgatct
    12001 tggccagttc gtccatcagg ttcgacttgt tgtgcaagcg gcccgccgtg tcgatcagca
    12061 ggacgtcgca ccggtcggcc ttggcgcgtt ccagcgcctc gtaggcgagt cccgccgcat
    12121 cagcgccggc gtccttggcg atcaccggca cgccagcgcg atcgccccac actttgagct
    12181 gctcgacagc ggcggctcga aaggtgtcgc cggcggccag catgaccttg cggccctcgc
    12241 gcttgtagag gttggcgagc ttggcgatgg tcgtggtctt gccgctgccg ttcaccccga
    12301 ccaccagcac gacatgcggc ttgcggctcg ggtcgatcga aagcggggtc gccaccggct
    12361 gcaggatctc ggcgatgtcg tcggcaaagg ccgcgcgcac ctcctcgtcg gtgacttcct
    12421 tgccgaagcg ctccttgccg agcttgtcga ccaggcgagc cgccacgctg acgccgagat
    12481 cggcctcgat cagcgcgtcc tccaactggt cgagcgtctg ctggtcgagc gtcttcttgg
    12541 tgaacaggcc ggtgatgctc tcggtgaccc gcttggtcga cttggcgaga cccgagcgca
    12601 ggcgtgacag ccagcctttc ttttcggtct cgcccgcgtc gggctgcatc gtgtcgctca
    12661 cgtccatctc tcaggccagc agcgagggat cgagctcgcc cttgaaggcg agcgcgatgg
    12721 cgccggtcat cagcacgtga tcgtcgcgca gccattcgac ggcgagcgtg ccgccatcga
    12781 cgatcacctg ggccttgcgc ttcaccaggc cgcggcgggt tgccgccacc acggcggcac
    12841 aggcgcccga gccgcaggcg agcgtgagcc cggcgccgcg ctcccacacg cgcaaccgca
    12901 ggcgatcttc atcgacgagc tgagcaacgc cgatattggc gcgttcggga aagaattgat
    12961 gacgttccag cttcggtccc agctcgccaa gcgggatcgc cgcggcatcg tcgacgaaga
    13021 aggtggcgtg cggattgccc atgctggtgc cgaccggatc ctgcaacggc ccaagcccga
    13081 ccggcatgtg attggtgtcg caggcctcgc tgaccgggat gtcgcgccag tcgagccgtg
    13141 ccagtcccat gtcgacggaa atgaccggca ggccgtcggc cgcgataccg gccttctgtg
    13201 agtcgagcag gccggaaacc gtttgcaccg tgacgtggtc ggtctggcgc tcctccatca
    13261 acaccgaggc gacgcaacgt gtggcgttgc cgcaggcgcc ggcttcgccg ccgtcgggat
    13321 tgtagatgcg catgaagacg tcggcctcgt gctcggtcgg cttctcgagc acgatcagct
    13381 ggtcgcagcc cacgccccgc cgccggtcgg cgatggcgcg gcggcgcgcc ggtgtcaaat
    13441 cgaaggcggc attgcgcgca tcgagcagga caaagtcgtt gcccagcccg tgcatcttga
    13501 ggaacaccgc tttggccatg ccgcgctata tggcggttcg cccgggccag cgcaacgagc
    13561 gcctgcggac ctggccgtcg cgaggaccac cccgttcgcg cacgtcgagc gccgccagcc
    13621 tcttggtgta gatggtcagg tgcaggatgc cgagcggctc gtagggcatg acgggctcga
    13681 cgaacaggcc gcgctcggca tcccaggccg gcgtggcgtg atggaccggc cagttgcagc
    13741 ggctgggcag cggctcgtag gggaagcctt tgtcgtacac cagaacgttc agcgccagct
    13801 gatcggtgag gtcggtcgag cgctgcagcg cctggcggta gatgtcggcc cagccggccc
    13861 aatgcggcgc ctgggctttg agcgcgaaca cgccggcatt gatcatggga tagcggatca
    13921 gccgctcggc cgttgccttg tcgaagcagg attcataggc cgcgccgcac accgccgaga
    13981 attcgcccca cgcatgatgg taatgacgca tcgcgcggtg aatctccggc gccacggcca
    14041 gcgcaccggt gcgggcggcg gcgaggaaca gcgagatcgc atcgccctgc tgcacccagc
    14101 agtcgccatc gatccagaga taaagatcga agcccggaaa gtagcgcggc agaaaaggcc
    14161 gcgcggtcag cgccttgtag ccgtcgctga gcttgtcacg cccgggaaaa tcgaaatccc
    14221 agtcgggtac cgccagcatc ccgccctgtt cgcggcacca agtgcgctgc tcgtcggcga
    14281 ggccgcaatc gaggatgccg agcgccaggt cgcgaccttc ggacgtcgca cgcagcgagc
    14341 cgatacaatc cttcataagg tcgaaatagc cggcatcgcc gccggtgatc acgatgattc
    14401 gttccgacac ctgggcagga tggccgatga gggctttgct gtcgcctgcc attgcgccac
    14461 agtccggccg ggagggcccc atggccaagc acatcgacta ctacgtctcg ctcaattcac
    14521 cctggaccta tctcggctcc aagcgcttcg aggcgatcgt caagaagcat ggcgctcacg
    14581 tcaccatctg gccggtcgat ttcggctcgg tattcgccgt gtcgggcggc ctgccgctgc
    14641 ccaagcgcgc gccgcagcgc caagcctacc gcatgatgga gctcaagcgc tggcgcgatc
    14701 acctcggcgt gccgctcaac ctcgagccca agttctttcc cgccaacgag gtgccggcgg
    14761 cgaaatgcgt gatcgcgttg cgcgaactcg gccgcatgcc cgacgccatc aagcttgcgc
    14821 atgccgttct gcatgcgttg tgggccgagg agaaggacac cggcgatccg gcaaccctgc
    14881 aggcgatcgt cgccggctgc ggcctcgacg tcgccaccgt gatcaaggcg agcgaagcgc
    14941 ctcatatggc tgagaagcgc gaatcctata ccaagttcgc gatcgaccgg ggcgtgttcg
    15001 gcgcgccctc gttcgtgatc ggcggcgaga tcttctgggg ccaggaccgg ctcgacttcg
    15061 tcgaccgcaa gctcgcggcg tagtcagatg tcgagcagcg ccgcggccac gacggcaagg
    15121 ccgttgttga ccatgtgcga gaccagcgaa ggccacagcg agccggtgcg ccggcgcagc
    15181 cagccgaacc acaggcccag cggcagaacc aggatgacat gcgccagctc gatatgggcg
    15241 gcggcgaagg cgagcgagct cacgatccag gcgacgacgg tgccccaacg accggccagc
    15301 cagccgtaga gcaggccgcg aaagaccagt tcctcgacca gcggcgccaa gccagccagc
    15361 gcggccagcg tcgctacgaa cagcgccgga tcgcgagcga tctccagcgc ctccttcacg
    15421 ccctggggtt ctagaccgat ctgactcacc gccaccgaca ccacgacggt gccgagagtg
    15481 ccaagcacga tcggccgcca ccccgccgga cgaaaaccga gggccggcag ggcagttcgg
    15541 cccatcggcg caacggccag agcgaccgcg atcaggccaa cggcgaagaa cgtcgcgatg
    15601 agcgccagca tgccccagtc gcgcgccagc cagacggccg gcaccagcag cagcggcaca
    15661 gccgccagga agatcaggat cgaccatccg cgaatgggag gtaaaccctg ctggatcaaa
    15721 gggttatggt atgcagccaa gccttttgac tccgtggccg gcaggcctta taccccggcc
    15781 gatcaatcgg tcgtgccgat ttatggttcc cccgtcgggg aactccgctg atccgcgaag
    15841 gttcgcgcat cggtgcgata cgtctttggg cttttgggag cgcgatgttc gagggtctga
    15901 gcaaacgtct gggcgacgtc ttcgacaagc ttcgcgggcg cggtgcgctt tcggaagccg
    15961 acgtcgacgc ggccctgcgc gaggtccgga ccgcactgct ggaagccgac gtggccctgc
    16021 cagtggtgcg ccagttcatc gattcggtgc gtccccaggc aatcggcgcc gacgtgatcc
    16081 gctcggtgac gccgggccag atggtgatca agatcgtcaa cgatcacctg gtcgagatgc
    16141 tgggcggcac cgtcgccgac ctcgacctca acgccgtgcc gccggtcgtg atcctgatgg
    16201 tgggcctgca gggttcgggc aagacgacga gcagcgccaa gatcgcctat cgcctgagcc
    16261 aaggcccgca gggcatggcc gccgagatgt tcggcggcag cttcgcaacc aagcacaagg
    16321 tcatgatggc ctcgctcgac acgcgtcggc cggccgccca gcagcagctc gccgtgctcg
    16381 gccagcagac cggcgtgccg acgctgccga tcgtgccgct cgagatgccg cttgccatca
    16441 cgcggcgcgc actggagacg gcgcggcgcg aaggcttcga tgtcctgatc ctcgacacgg
    16501 cggggcgtct gtcgatcgac gaggtgttga tgaaggaggt cgccgacatc agcgacctcg
    16561 ccaagcccaa ggagacgctg ctcgtcgccg acgccatgac cggccagg
//
LOCUS       DASWGA010000124         3952 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2293747, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000124 DASWGA010000000
VERSION     DASWGA010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3952
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2293747"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VF991_03025"
     CDS             <1..564
                     /locus_tag="VF991_03025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555439.1"
                     /translation="AQDPGMIDRRFVLLAPLGLALSLGACGWFGGGSSSSDTTNVYCP
                     SPLTVQDAQRLTHFKDGAGRDPRDVAYEAALIASGTTCELNRNQLNVNLVMRISVSAG
                     PSAEAAATRVPYFVRVINAGGTVVQGQEFIADFRLTSGNPRGTSQEELSLALPYSQLS
                     DLAGYRIAVGLKPTQEELNYNRRRVGQ"
     gene            complement(568..879)
                     /locus_tag="VF991_03030"
     CDS             complement(568..879)
                     /locus_tag="VF991_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEX9555440.1"
                     /translation="MTVTCAIRYVIDPFKRDAFETYARNWLTIIPANGGDLLGYFMPH
                     EGTNNIAHALISFESLAAYEAYRTRLRADKAGAENLRFAEAERFILSEERTWLRPVTA
                     G"
     gene            1024..2367
                     /locus_tag="VF991_03035"
     CDS             1024..2367
                     /locus_tag="VF991_03035"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEX9555441.1"
                     /translation="MSAYAERLEALAAEAADRCTACGKCFEVCPTAREVGLDAGAAVQ
                     RVGELLALTRTGGAAAEGLQKWLGACDGSARCSAACPEEINVRQWVTIAKLKALEAGR
                     PREVGAANAANRFRHMAQAVRLLASMQLPSETLKRILAPAERRTAEVLFYTGCNVLRT
                     PHIVLNVMDILDALELDFDVVGGTAHCCGVYQFQEADLPTYERMGHRTFQRFGQSGAA
                     KVLTWCPTCTKNFDELEKDVEAPAFDLGHISEFLAANLDALRARFTGDQPKRRVVIHE
                     HLGIGATVASIAKLLRAVPNLELLELGQDSGFSYACGGMAAKFKEREQAIHRRLAEGA
                     VAAGADTIVTMYHSCHRALAGAEAVYPLRVVNFTDILAEALGRGGHPDYYRLYKAGGP
                     MDEAVAAARRFLQDNGVRVDEASVQSLTADIFNETGLAGSRETFQQAFTALAKDG"
     gene            complement(2376..2747)
                     /locus_tag="VF991_03040"
     CDS             complement(2376..2747)
                     /locus_tag="VF991_03040"
                     /inference="COORDINATES: protein motif:HMM:NF017020.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEPN domain-containing protein"
                     /protein_id="HEX9555442.1"
                     /translation="MATDAVAGWLAVVDDDLRQVVNNLYGPMPSLIGAAYHCQQAAEK
                     LVKAVLVEANTVFPKTHDIAALVGLLPSGHRLKAKLHSLEKLTPYGVAYRYPAEDDWD
                     VPSTRTIEAWKDEIDAIRSML"
     gene            complement(2737..3057)
                     /locus_tag="VF991_03045"
     CDS             complement(2737..3057)
                     /locus_tag="VF991_03045"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX9555443.1"
                     /translation="MTAESDKLDKAVDRIVQAMQPEAIYLFGSRARGEGHADSDYDLL
                     VIVPDDAPAERSSLSATARVARDPGVPLDIVPCRRSVFERKRHDIGTLSYLAAHEGRL
                     IYGH"
     gene            complement(3099..3674)
                     /locus_tag="VF991_03050"
     CDS             complement(3099..3674)
                     /locus_tag="VF991_03050"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9555444.1"
                     /translation="MGKAEDTKARVERAALTLFVARGVAETTTKEIAMAASIAEGTIY
                     RYFPSKERLALDLFLRHHRALAEALGDAHRPAKSLRAKIDAIVRCYCAWADRDWTLFA
                     YHLLNQHSFLIQVPDDTPNPVTVVREVIAQAMKAGEIPRRNVDLAAASAIGVVLQAAT
                     YKVYGRFTGNLSAHVRFFSDAAWAVLAVKER"
     gene            complement(3626..>3952)
                     /locus_tag="VF991_03055"
     CDS             complement(3626..>3952)
                     /locus_tag="VF991_03055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555445.1"
                     /translation="RPRGKAPKKRAYFFPLANEWLLTYKMSICSLMEVPMFIRRAFTV
                     FLEVQSEAQPPAVSLADWTPNFTLDWRWFCEPVEDTPLPSERSLIDWPAWARPKTPRR
                     GSSAPR"
BASE COUNT          693 a         1256 c         1299 g          704 t
ORIGIN      
        1 gcacaagacc ctggcatgat cgacagacga ttcgttcttt tggcgccgct tggcctggcg
       61 ctgtcgctgg gcgcttgcgg ctggttcggt ggcggcagct cgtcgagcga caccaccaat
      121 gtttattgcc cgtcgccgct cacagtccag gacgcccagc ggctcaccca tttcaaggac
      181 ggggcggggc gtgatccgcg tgacgtcgcc tatgaggcgg cgctgatcgc ctcgggcaca
      241 acgtgcgagc tcaaccgcaa ccaactcaac gtcaacctgg tcatgcgcat ctcggtcagc
      301 gccggtccgt cggctgaagc ggccgcgacg cgcgtgccct acttcgtgcg cgtgatcaac
      361 gccggcggca ctgtcgtgca gggccaggaa ttcatcgccg actttcgcct gacgtccggc
      421 aatccgcgcg gcacctcgca ggaggaactg tcgctggcgc tgccttatag ccagctcagc
      481 gatctcgccg gctatcgcat cgccgtcggg ctgaagccga cgcaggaaga gctcaattac
      541 aaccgccggc gagtcgggca gtgacggtca gccggcggtc accggacgga gccaggtgcg
      601 ctcctcgctc aggatgaacc gctcggcttc ggcgaagcgg agattctccg caccggcctt
      661 gtccgcgcgc aggcgcgtgc gataggcctc gtaggccgcc aggctttcga acgagatcag
      721 ggcgtgggcg atattgttgg tgccttcgtg cggcatgaag tagcccaaga ggtcgccgcc
      781 gttggccggg atgatggtca gccagttgcg ggcataggtc tcgaacgcat cgcgcttgaa
      841 cggatcgatc acatagcgga tggcgcaggt gacggtcatg gatggctccg aacggttcgc
      901 attcgttcag cctagcggct tgcggcgcgc cgatgcttcg gtcgcagccg aagacttgac
      961 attggcttga tggcgacggt ccactcggcg gatgcttgga ggcccgatgc tgggaggatt
     1021 gtcttgagcg cctatgccga acggctggag gcgctggccg ccgaagcggc cgaccgctgc
     1081 acggcctgcg gcaagtgctt cgaggtctgc ccgaccgcgc gcgaagtagg cctcgacgcc
     1141 ggcgccgccg tgcagcgcgt cggcgagctt ttggccctga caaggaccgg cggagcggcg
     1201 gccgaaggcc tgcagaagtg gctcggcgcc tgcgacggca gcgcgcgctg cagcgctgcc
     1261 tgccccgagg agatcaatgt ccggcagtgg gtgaccatcg ccaagctgaa ggcgctggag
     1321 gccggccgcc cacgcgaggt cggcgccgcc aatgccgcca accgcttccg ccacatggcg
     1381 caggcggtgc ggctgctcgc cagcatgcag ctgccatccg agacgctgaa gcggatcctg
     1441 gcgccggccg aacgacgcac cgcggaggtg ctgttctata ccggctgcaa cgtgctgcgc
     1501 acgccgcaca tcgtgctgaa cgtcatggac atcctcgatg cgctcgaact cgacttcgac
     1561 gtcgtcggcg gcaccgccca ttgctgcggc gtctatcaat tccaggaagc cgacctgccg
     1621 acctacgagc gcatgggtca tcgcaccttc cagcgcttcg gccagtccgg cgcggcaaag
     1681 gttttgacct ggtgcccgac ctgcaccaag aatttcgacg agctggaaaa ggatgtcgag
     1741 gcgccggcgt tcgacctcgg ccatatcagc gaatttttgg ccgccaacct cgacgcgctc
     1801 agggcgcgtt tcacgggcga ccaaccgaag cgtcgcgtgg tgatccacga gcatctcggc
     1861 atcggcgcca cggtcgcaag catcgccaag ctcttacgcg cggtgcccaa cctcgagctg
     1921 ctcgagctcg ggcaggactc cggcttctcc tatgcctgcg gcggcatggc cgccaagttc
     1981 aaggagcgcg agcaggcgat ccaccgccgg ctggccgaag gcgcggtcgc ggccggcgcc
     2041 gacaccatcg tcaccatgta tcattcctgc catcgcgcgc tggccggcgc cgaggcggtc
     2101 tatccgctgc gggtcgtgaa cttcaccgac atcctggccg aagcgctcgg ccgcggcggt
     2161 catcccgact attaccgtct ctacaaggcc ggcggtccga tggacgaggc ggtcgcggcg
     2221 gcgcgtcgct tcctgcagga caatggtgtc agggtcgacg aagcgtcagt gcagtccctg
     2281 actgccgaca tcttcaacga aaccggcctc gccgggtcgc gcgagacctt ccagcaagcg
     2341 ttcaccgcac tggcgaagga cggctgaagg cggtgtcata gcatcgacct aatagcgtcg
     2401 atttcgtctt tccaagcttc gattgtccgc gtcgacggta cgtcccaatc atcttcggct
     2461 ggataccggt acgcgacacc gtatggcgtc agtttctcga gactgtgcaa tttggccttg
     2521 aggcgatggc cagatggcaa caatccgaca agggctgcga tgtcgtgggt cttgggaaag
     2581 actgtgtttg cctcgacgag aactgctttg accagcttct ctgcggcttg ctggcaatga
     2641 taggcagcac cgatgagcga cggcatcggt ccgtaaagat tgttaacgac ctgccgcaag
     2701 tcatcgtcga cgaccgcaag ccaaccggcc acggcatcag tggccataga tcaagcggcc
     2761 ttcgtgtgca gcaagatagc taagggtacc gatatcgtgg cgcttgcgct cgaatacgct
     2821 tcgccgacat ggaacgatgt ctaggggcac accggggtcg cgcgcaacgc gcgccgttgc
     2881 gctcaacgaa cttctttccg ccggcgcatc atcgggcacg atgacgagca gatcgtagtc
     2941 gctgtcggca tgcccctcgc ctcgagcgcg gctgccgaaa aggtagatcg cctccggttg
     3001 catcgcttgc acgatgcggt caacagcctt gtcgagtttg tctgattcgg cggtcatacg
     3061 gcatcataca ccaactgggc gtattccgat aagaaggctc acctttcctt caccgccagc
     3121 actgcccaag cggcgtcgga gaagaagcgg acatgggccg acagattgcc ggtgaaccgt
     3181 ccgtagacct tgtaggtcgc cgcctgcagc acgacgccga tcgccgaggc ggcggcgagg
     3241 tcgacattgc gccgggggat ttcgcccgcc ttcatcgcct gggcgatcac ctcgcgcacg
     3301 acagtcaccg gattgggcgt gtcgtcgggc acctggatca ggaaggagtg ctggttcagc
     3361 agatgatagg cgaacaaggt ccagtcgcgg tcggcccagg cgcagtagca gcgcacgatg
     3421 gcgtcgatct tggcgcgcag gctcttggcc ggccggtgtg cgtcgcccag cgcctcggcg
     3481 agcgcgcggt gatggcgcag gaagaggtcc agcgccagcc gctccttgct cgggaaatag
     3541 cggtagatcg tgccctcggc gatcgacgcc gccatggcga tctccttggt cgtggtctcg
     3601 gccacgccgc gcgccacgaa cagggttagc gcggcgcgct cgacccgcgc cttggtgtct
     3661 tcggccttgc ccatgcgggc cagtctatga gggagcgctc acttggcaaa ggcgtgtcct
     3721 ccacaggctc gcagaaccag cgccagtcga gtgtgaagtt gggcgtccag tcggcgaggg
     3781 agacggcggg cggctgggcc tcgctctgca cctcgaggaa gacggtgaag gcacggcgaa
     3841 tgaacatcgg aacctccata agtgagcata tgctcatttt ataagtgagt aaccactcat
     3901 ttgcaagagg aaagaaatag gcccgttttt tcggggcttt tcctcgtgga cg
//
LOCUS       DASWGA010000125         9457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1914889, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000125 DASWGA010000000
VERSION     DASWGA010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9457
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1914889"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VF991_03060"
     CDS             complement(<1..281)
                     /locus_tag="VF991_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9555446.1"
                     /translation="MSQETGANRSVSPAIAGATANKDRTLLIADDDAAFRNRIARALE
                     QRGFIVTSVGSVAEALAQTARPPAFAVLDLRLGDGNGLELVGPLRQARP"
     gene            complement(305..1660)
                     /locus_tag="VF991_03065"
     CDS             complement(305..1660)
                     /locus_tag="VF991_03065"
                     /inference="COORDINATES: protein motif:HMM:NF033792.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase"
                     /protein_id="HEX9555447.1"
                     /translation="MARAETTSSPAAPGSGAGTMLRGAASPSLPPRGGVRLRALVLIR
                     WAAVAGQFFTAAVVHWGLGFNLPLLAVGGAIALSALLNLTVSLGRPASARIDDREATV
                     FLAFDILQLAVLLYLTGGLINPFALLLLAPVAIGATILSLASNIALSLLTIASIALLG
                     VFHQPLPWRGPPPELPEIYQTGVWAGLTLTTLLITLYGWRLAEEARQMADALAAAQAA
                     LAREQRLSALGALAAAAAHELGSPLSTIAVVTKEMLREVEPDDPLREDVELLSAESDR
                     CRAILARLSVDPAGDVSDAYTLVPMPALIEAAAQSYQRDDIAITFDSGPVGDGVPTRA
                     PIQVRSPEIMQGIGNIVQNAVSFARHEVTIVTRWTNEWSQVEVSDDGPGFSQALLDEL
                     GTPFISTRQGEEGHMGLGVFIAKTLLERTGATVTFGNRSTGGGGAAVSVRWPNPVFKA
                     T"
     gene            complement(1665..2465)
                     /locus_tag="VF991_03070"
     CDS             complement(1665..2465)
                     /locus_tag="VF991_03070"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX9555448.1"
                     /translation="MSKRGIPAGAAVRGTDKGYDHAAPSPRLKPGSERPVEKIDQTYP
                     YLRPRDAATLILVRQRGKIPEVLLGCRDAKHAFMPNRYVFPGGRVDPADARVPIATPL
                     NRFVDERLRKAATAQRARALAVAAVRETFEETGLMLAKPLKGGPPDEDFGEHWRGFLD
                     KGFAPALDCLDLIARAVTPPGRPRRFNARFFMARAEDATGDIRHSSELGDIRWVRLDE
                     ARELPLPTITGLILGEVGRLAKEPPNRKAQRKIPLFTTVHRKHLMLEE"
     gene            complement(2539..3015)
                     /locus_tag="VF991_03075"
     CDS             complement(2539..3015)
                     /locus_tag="VF991_03075"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9555449.1"
                     /translation="MKAAIIGELQMTEETMPDVVTSPSETASRQKVAHARISEPVLVK
                     GRREFFKYRDLGVADASAGTMRAQVMMSSKGMSRPTGWHYHECDGQFVYVLKGWVDLQ
                     FEDGRTIRIDEGDSLYIPGFLRHNEIRTADTLEILEVSVPGQMGTTPCDPPEGFKA"
     gene            complement(3024..4061)
                     /gene="pyrC"
                     /locus_tag="VF991_03080"
     CDS             complement(3024..4061)
                     /gene="pyrC"
                     /locus_tag="VF991_03080"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX9555450.1"
                     /translation="MPASITLRRPDDWHVHLRDGPMLKACAVHTARQFARAIIMPNLV
                     PPVTRVAEAASYRERIRRAVPAELKFEPLMTCYLTDDADPAELLRGKREGVWVAAKLY
                     PAHATTNSAHGVTSMERIAPALEAMEEAGMPLLVHGEVTDAEVDIFDRESVFLDKVLT
                     PLLRRHQGLKVVLEHITTKEGVAFVEASGPRVGGTITPHHLSYNRNAIFKGGIRPHLY
                     CLPIAKSEEHRLALRRAATSGGPPFFLGTDTAPHSADTKECACGCAGIFNAPVALQVY
                     AQVFSEEGALDRLEAFASLNGPRFYGLPPNEARITLRAGSLEAPERIDIPGSDKSVVV
                     FRPDTPVGWSF"
     gene            4119..5174
                     /locus_tag="VF991_03085"
     CDS             4119..5174
                     /locus_tag="VF991_03085"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9555451.1"
                     /translation="MNELKEAIAFAKSAESKWPQSMRMPDGQFVMTYDSGEKAPDNEV
                     LGPVAPRGGHSGIVYRGGKLLAEWGDTARPDMTFSVAKSYLALLAGLALGDGLIKSLD
                     DKVGDDALDDGFESAQNRDITWRHLLTQTSEWQGTMFGKEDRIDHNRVVGLAVAEAPK
                     GTRRALKKPGTFYEYNDVRVNRLSCSLLQLFKEPLPAVLKRRIMDPIGASSDWKWDGY
                     RNSTVTIDGKEMVSVPGGGHWGGGIVISARDLALMGLLVAQGGAWNGRQILPKGWTDE
                     LVKPCPVAPFYGLMWWLNTNKRQFAAASDKSYFALGWGSHIVWIDPDNDLVVVLRWID
                     RKQAPGFVERLLDALKK"
     gene            5171..6058
                     /locus_tag="VF991_03090"
     CDS             5171..6058
                     /locus_tag="VF991_03090"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9555452.1"
                     /translation="MKLDYSAVPKMPDGLTAAEHILAIEATSRAVRVPMGNGGRMMWH
                     VWGEDSGKPILLLFHGGSGSWIHWIRNVQPLARQFTVYAADLPGLGDSDPPDDVRDVW
                     SVTHCVKTAMDSLLPREKPFAITGFSFGGMVAGHIATLLGDRISRIVMVGAGGLKATR
                     KPGPKLRKLLPEMPAETLAAEARRNLEILMMHDPAKVDGVAIYMQILNTTRARTRSRD
                     MGQAFKLSEVLPRVKTPLTGIWGEFDSTTYPHIQERIDLFRALQPDFVMNVIPDAGHW
                     VAYEAAEAFNKKLLEVLKP"
     gene            6055..6771
                     /locus_tag="VF991_03095"
     CDS             6055..6771
                     /locus_tag="VF991_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9555453.1"
                     /translation="MKTEVAEIADKIYRLSTFVPTAGPKGFTFNQFLIDADQPLLFHY
                     GQRSLFPLISDAVKRVMPLDRLRWATCSHVEADEAGALNQWLAAAPKATPAHGQVGCN
                     IWLKDMADREPRVLKNDEVLDLGGKRVRWLDTPHVPHNWDAGLIYEETTGTLFSSDLF
                     TQFGPADVTTEADIVGPAIATEKAVPFMPATPLAEPTLRRLAALRPTTIALMHGPAFK
                     GDGGAALSALADYYGQRFNA"
     gene            complement(6871..8046)
                     /locus_tag="VF991_03100"
     CDS             complement(6871..8046)
                     /locus_tag="VF991_03100"
                     /inference="COORDINATES: protein motif:HMM:NF012377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HEX9555454.1"
                     /translation="MLLLVLLLSLAASARAEPLARINGKSFIAPDGSTLEIKGISLGN
                     WLAPEGYMFKFEVAKAPRQIFAAFDGLLGPERAQSFWKQFRDSYVTEADIRFIKSAGF
                     NTVRIPLHYRLLMTDDGEIAGEGWARLDRVLGWVREAGLLAILDLHAAPGGQTGINHD
                     DGPGYPLMFYVPRDRALTVRLWRAIALRYSGNPAILGYDLLNEPIAPYHDTATLNPRL
                     EPFYKEVTAAIREVDPGRIVILAGGQWSSSFDMLGPPFTDNLAYTYHLFWASTKRDSI
                     QRHLNFANLYDVPLFLGETGELTDEWNERFRKLQETHGIGWAFWTYKNLDTPSTVVSI
                     PRPEGWSEIVAFADGKGDKPSAAVIDRAIAQYLDGIRFRNGEVRWSYLASLGLKSAP"
     gene            8272..>9457
                     /locus_tag="VF991_03105"
     CDS             8272..>9457
                     /locus_tag="VF991_03105"
                     /inference="COORDINATES: protein motif:HMM:NF014500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555455.1"
                     /translation="MLLASLLVPLAVVAIVFLIQRLRIPAFLAIMATVVVYGIAADMT
                     FMSVGKAFGLGFTAALEQAGLLVVAGALVGALVLRQPLGTGTSAIAGALAGLGASATG
                     GLALLQPAGQEAPRRALGLALTLLACSALVPPSPLAVAAASVMKASSSTVLTIVLPVA
                     VIASLLGWWHVARQVPAADSPGRLDWTWLAVGLPIALLILQSVAQMPSEPLGKGGARE
                     FYIGISKPVMLAAMAITLAVLFAGRWQPSALAGRSWAPLLLAVGASGGLSRVFDETGM
                     AELLAEHALQPRFGLLTPFVAAAIVKTLQGNSLTAVLTASGMVEPMLPALGLDSATGR
                     ALAAAAVGAGSMAICHVNDPLFWIAAAMGRLSPGRALAVISLGSAVMATGALVVLAAV
                     KQF"
BASE COUNT         1560 a         3101 c         3211 g         1585 t
ORIGIN      
        1 tcgggccgtg cctggcgcaa cggcccgacg agttccagac cgttgccgtc gcccagccgc
       61 agatcgagca cggcgaaggc aggcggccgc gcggtctgtg ccagcgcttc ggcaaccgaa
      121 ccgaccgagg tgacgatgaa accgcgctgc tcgagcgcgc gcgcgatgcg gttgcgaaac
      181 gccgcatcgt cgtcggcgat cagcagcgtg cgatccttgt tcgccgtcgc gccggcaatg
      241 gcgggcgaca ccgagcggtt ggcgcctgtc tcctggctca tggctgctcc ttcgatatcg
      301 gccgctatgt agccttgaag acgggatttg gccagcgtac ggagaccgcc gcgccgcccc
      361 cgccggtgct gcggttgccg aaggtcaccg tcgcgccggt gcgctccaat agggtcttgg
      421 cgatgaaaac gcccaagccc atgtgtcctt cctcgccctg gcgcgttgaa atgaagggcg
      481 ttcccaattc gtcgagcagg gcctgcgaga agcccggccc gtcgtcggag acctcgacct
      541 gcgaccactc gttcgtccag cgtgtgacga tcgtgacctc atggcgcgcg aacgagacgg
      601 cgttctgcac gatgttgccg atgccttgca tgatctccgg actgcgcacc tggatcggcg
      661 ccctggtcgg cacgccatcg ccgaccggcc cggagtcgaa cgtgatggcg atgtcgtcgc
      721 gctgatagct ttgcgccgcc gcctcgatca gcgccggcat cggcaccagg gtataggcgt
      781 ccgacacgtc tccggccgga tcgaccgaca ggcgggcgag aatggcgcgg cagcgatcgg
      841 attcggcgga cagcaattcg acgtcctcgc gcagcggatc gtcaggttcg acctcgcgca
      901 gcatctcctt ggtcaccacc gcgatggtcg acagcggcga gccgagctcg tgggcggccg
      961 cggcggcgag cgcgcccaac gccgacaggc gctgctcgcg cgccagggcg gcctgcgctg
     1021 ctgccagcgc gtcggccatc tggcgcgcct cctcggcgag ccgccagccg tacaaggtga
     1081 tcagcaaggt cgtgagcgtc aggccggccc acacgccggt ctgatagatc tccggcagct
     1141 caggcggcgg gccacgccac ggcaacggct gatggaagac gccgagcagc gcgatgctgg
     1201 cgatggtgag cagcgacagc gcgatgttgg aggcaagcga caggatggtg gcgccgatcg
     1261 ccaccggcgc cagcagcagg agcgcgaagg gattgatcag gccgccggtg agatagagca
     1321 ggacggcgag ctgcaggatg tcgaaggcga gaaagaccgt ggcctcgcgg tcgtcgatgc
     1381 gcgccgacgc cggccggccc aggctgaccg tgaggttgag cagcgcagag agcgcgattg
     1441 caccgcccac cgccagcagg ggcaggttga aacccaggcc ccaatggacg acggcggcgg
     1501 tgaagaactg tccggcgacg gcggcccagc ggatcagcac cagcgcgcgc aggcgcacgc
     1561 caccgcgcgg cggcaggctg gggctcgcgg cgccgcgaag catggtccca gcaccggacc
     1621 ctggggcggc gggcgacgag gtggtctcgg cgcgcgccac gcccttattc ctcgagcatc
     1681 aggtgcttgc gatgcaccgt ggtgaacaac gggatcttgc gctgcgcctt gcgattgggc
     1741 ggctccttcg ccagccgccc gacctcgccc aggatgaggc cggtgatggt gggcagcggc
     1801 agctcgcgcg cctcgtcgag ccgcacccag cggatgtcgc cgagctcgct cgaatggcgg
     1861 atgtcacccg tcgcatcctc ggcgcgcgcc atgaagaagc gcgcattgaa gcggcgcggc
     1921 cggccgggcg gcgtcaccgc gcgggcgatc aggtcgagac agtcgagggc cggcgcgaag
     1981 cccttgtcca aaaagccacg ccagtgctcg ccgaaatcct cgtcaggcgg cccgcccttg
     2041 agcggcttgg ccagcatcaa tccggtctcc tcgaaagtct cacgcacggc ggcaacggcc
     2101 agcgcgcggg cacgttgcgc cgtcgccgcc ttgcgcaggc gctcatcgac gaagcggtta
     2161 agcggcgtgg cgatgggcac gcgcgcatcg gcgggatcga cgcggccgcc gggaaagaca
     2221 tagcggttgg gcatgaaggc gtgcttggcg tcccggcaac ccagcagcac ttcggggatc
     2281 ttgccgcgct ggcgcaccag gatcagcgtc gcggcatcgc gcggccgcag atagggatat
     2341 gtctggtcga tcttctcgac cggccgttcg ctgccgggct tcagccttgg actgggggcg
     2401 gcgtggtcgt agcctttgtc ggtgccgcgc acggcggcgc ccgcaggaat gcctcgcttg
     2461 ctcatggcaa gacgatagag caaatccccg cactcacaaa atttgatgcg caaaagagcc
     2521 cggcgagagg ttttagcctt acgccttaaa tccttcggga ggatcgcacg gcgtggtgcc
     2581 catctgccct ggcaccgata cctcgaggat ctccagcgtg tccgccgtgc ggatttcgtt
     2641 gtggcgcagg aacccgggga tatagagcga atctccttcg tcgatgcgga tcgtgcggcc
     2701 atcctcgaat tgcagatcga cccagccctt cagcacgtag acgaactggc catcgcattc
     2761 gtggtagtgc caaccggtcg gccggctcat gcctttgctc gacatcatca cctgggcgcg
     2821 catggtacct gcgcttgcat ccgcgacccc aagatcgcgg tacttgaaga actcgcgccg
     2881 tcccttgacc agtacgggtt cgctgatgcg agcgtgagca accttttgtc tggaagctgt
     2941 ctcggatggg cttgtcacga cgtcaggcat cgtttcctcc gtcatctgca attcgccaat
     3001 aatggccgcc ttcacggggc gcgtcaaaac gaccagccga ccggagtgtc ggggcgaaat
     3061 accaccacgc tcttatcgct tcctggaata tcaatgcgtt ccggcgcctc cagcgatcct
     3121 gcgcgcaagg tgatgcgcgc ctcgttggga ggaagcccgt aaaaacgcgg cccgttcagc
     3181 gaggcgaatg cctccagccg atcgagcgct ccttcctcac tgaagacctg ggcatagacc
     3241 tgcagggcca ccggcgcgtt gaaaatgccg gcgcagccgc aggcgcattc cttggtgtcg
     3301 gcgctgtgcg gcgcggtgtc ggtgccgagg aagaacggcg gtccgcccga cgtcgccgct
     3361 cgccgcagcg ccagccgatg ttcctcgctc ttggcgatcg gcaggcaata aaggtgcgga
     3421 cggatgccgc ccttgaagat ggcgttgcga ttgtaggaga gatgatgcgg cgtgatcgtg
     3481 ccgccgaccc ggggcccgct ggcctcgacg aaggccacgc cttctttcgt ggtgatgtgc
     3541 tccagcacga ccttcagccc ctgatggcgg cgcagcagcg gcgtcagcac cttgtccaaa
     3601 aacaccgatt cgcggtcgaa gatgtcgacc tcggcgtcgg tcacctcgcc atggacgagc
     3661 aggggcatgc ccgcctcctc catcgcctcc agcgccgggg cgatgcgctc catcgaggtg
     3721 acgccgtgcg cggagttggt ggtggcgtgc gccggataga gcttggccgc gacccacacg
     3781 ccctcccgct tgccgcgtaa aagctcggcc ggatcggcat cgtcggtcag atagcaggtc
     3841 atcagcggtt cgaacttgag ctcggccgga accgctctgc ggattcgctc gcggtacgag
     3901 gcggcctcgg ccactcgggt caccggcggc acgaggttgg gcatgatgat ggcgcgggcg
     3961 aactggcgcg cggtgtggac agcgcaggct tttagcatcg gcccatcgcg caggtggacg
     4021 tgccagtcgt cggggcggcg gagggtgatc gaggcgggca taggcatagc gcgttttcta
     4081 cgcttgctcc cggacgggct ccaatgttga ttgcgggcat gaatgagctg aaagaggcga
     4141 ttgccttcgc caagtccgcc gagtccaaat ggccccagag catgcgcatg ccggacggcc
     4201 agttcgtgat gacctacgat tccggcgaaa aggcccctga taacgaggtg ctgggcccgg
     4261 tcgcgccgcg cggcggtcac tcgggcatcg tctatcgcgg cggcaagctt ttggccgaat
     4321 ggggcgacac ggcgcggccc gacatgacct tcagcgttgc caaaagctat ctcgctctgc
     4381 tcgctggcct ggcgctgggc gacgggctga tcaaaagcct cgatgacaag gtgggcgacg
     4441 acgccctcga tgacggcttt gagagcgcgc agaacaggga catcacctgg cgtcacctgc
     4501 tgacccagac cagcgaatgg caaggcacga tgttcggcaa ggaggaccgc atcgaccaca
     4561 atcgcgtggt tggcctcgcc gtcgccgagg cgcccaaggg cacgcggcgc gcgttgaaaa
     4621 aacccggcac cttctacgaa tacaacgacg tgcgcgtgaa tcgcctgagc tgctcgctgc
     4681 tgcagctctt caaggagccg ctgcccgcgg tgctgaagcg ccgcatcatg gatccgatcg
     4741 gcgcctcgtc ggactggaag tgggacggct atcgcaactc gaccgtcacg atcgacggca
     4801 aggaaatggt ctccgtgccg ggcggcggcc attggggcgg cggcatcgtg atctcggcgc
     4861 gcgaccttgc gctgatgggc ctgctggtgg cgcaaggcgg cgcctggaac ggcaggcaga
     4921 tcctgcccaa gggctggacc gacgaattgg tgaaaccctg cccggtggcg ccgttctacg
     4981 gactgatgtg gtggctcaac accaataagc ggcagttcgc ggcggcgtcg gataaaagct
     5041 acttcgcgct gggctggggc agccacatcg tgtggatcga tcccgacaac gatctcgtgg
     5101 tggtgctgcg ctggatcgac cgcaagcagg cgccgggatt cgtcgaacgc ctgctggatg
     5161 cactcaagaa atgaagctcg attactcggc cgtccctaaa atgccggacg ggctgaccgc
     5221 cgctgaacac attctagcaa tcgaagcgac gtcgcgtgcc gttcgcgtgc ctatgggcaa
     5281 tggcgggcgc atgatgtggc atgtctgggg cgaagattcg ggcaaaccga tcctgctgct
     5341 gttccatggc ggttcgggct cgtggatcca ctggatccgg aacgtccagc cgctggcgcg
     5401 gcagttcacc gtctacgccg ccgacctgcc gggcctgggc gacagcgacc cacccgacga
     5461 cgtgcgcgat gtctggtcgg tcacccattg cgtgaagacg gcgatggatt ccctgttgcc
     5521 ccgcgagaag ccgttcgcca tcaccggttt ctccttcggc ggcatggtgg cgggccatat
     5581 cgccacgctg ttgggggacc gcatcagccg catcgtcatg gtcggcgccg gtggcctgaa
     5641 agccacgcgc aagcctggcc cgaagctgcg caagcttttg cccgagatgc cggcggaaac
     5701 acttgccgcc gaagcacggc gcaaccttga gatcctgatg atgcacgatc ccgccaaagt
     5761 cgacggcgta gcgatctaca tgcagatcct gaacaccacg cgcgccagga cgcgcagccg
     5821 ggacatgggc caggcgttca aactgagcga agtgctgccc cgggtgaaga cgccgctcac
     5881 cggcatctgg ggcgaattcg attcgaccac ctatccgcac attcaggaac gcatcgactt
     5941 gttccgcgcg ctgcagccgg acttcgtgat gaacgtcatt cccgacgccg gccattgggt
     6001 tgcctacgag gccgccgagg cgttcaataa gaagcttcta gaggttctca agccatgaaa
     6061 accgaagtcg ccgagatcgc cgacaagatc tatcgcctgt cgaccttcgt gccgacggcc
     6121 gggcccaagg gattcacctt caaccagttc ctgatcgatg ccgaccagcc tctgctgttc
     6181 cattacggcc agcgttcgtt gtttccgctg atctccgatg cggtcaagcg cgtgatgccg
     6241 ctcgacaggc tgcgctgggc gacgtgcagc catgtcgagg ccgacgaggc gggcgcgctc
     6301 aaccagtggc tggcggccgc gcccaaggct acgccggccc acggtcaggt cggctgcaac
     6361 atctggctga aggacatggc cgatcgcgaa ccgcgcgtgc tcaagaacga cgaggtgctg
     6421 gatctcggcg gaaaaagagt gcgctggctc gacacgccgc acgtgccgca caactgggac
     6481 gccggattga tctacgagga gaccaccggc acgctgttca gcagcgacct tttcacccag
     6541 ttcgggccgg ccgatgtgac gactgaggcc gatatcgtcg gtccggccat cgccaccgag
     6601 aaggccgtgc ccttcatgcc ggcaacgccg ctcgccgagc cgacgctgcg ccggctggcc
     6661 gcgctcaggc caacgaccat tgcgctgatg cacggcccgg ccttcaaggg tgacggcggt
     6721 gcggcgctga gcgcgctcgc cgattattac ggccagcggt tcaacgcgta gccccctcac
     6781 ccagcctctc cccctaacgg gggagaggag gcttgaggat gagttctcat gttcctctcc
     6841 cccgctaggg ggagaggtta ggtgaggggg ctacggcgcg ctcttcaagc cgagcgatgc
     6901 cagataactc cagcgaacct cgccgttccg gaatcgaata ccgtcgagat actgcgcgat
     6961 ggctcggtcg atcaccgcgg ctgacggctt gtcaccctta ccgtcggcga aggccacgat
     7021 ctcgctccag ccctcggggc gcgggatcga gacaacggtc gagggtgtgt cgagattttt
     7081 ataggtccag aacgcccagc cgatgccgtg tgtctcctgc agcttgcgga agcgctcgtt
     7141 ccattcgtcg gtgagctcgc cggtctcgcc caggaacaag ggcacgtcgt agaggttggc
     7201 gaagttgaga tggcgctgaa tggagtcgcg cttcgtgctc gcccagaaca aatgataggt
     7261 gtaggcgaga ttgtcggtga agggcgggcc cagcatatcg aagctcgagc tccattgccc
     7321 gccggccagg atgacgatgc ggccgggatc gacctcgcgg atcgccgccg tcacctcctt
     7381 gtagaacggc tccagccggg gattgagcgt cgccgtgtcg tgatagggcg cgatcggctc
     7441 gttcaacagg tcgtagccca ggatcgccgg attgccgctg tagcgcagcg cgatggcgcg
     7501 ccacagcctg accgtcaacg cgcgatcgcg cggcacgtag aacatcagcg gatagcccgg
     7561 cccgtcgtcg tggttgatgc cggtctggcc gccgggcgcg gcgtgcaggt cgaggatggc
     7621 caaaagtccg gcctcgcgca cccagcccag cacgcgatcg agccgcgccc agccctcgcc
     7681 cgcgatctcg ccgtcatcgg tcatcaacag gcgatagtgc agcgggatgc gcacggtgtt
     7741 gaaaccggcc gacttgatga accggatgtc ggcctcggtg acgtagctgt cgcggaactg
     7801 cttccagaag gactgggcgc gctcgggccc caacaggccg tcgaaggcgg caaaaatctg
     7861 gcgcggcgcc ttggcgacct cgaacttgaa catgtagccc tcgggcgcca gccagttgcc
     7921 gaggctgatg cccttgatct cgagcgtgct gccgtccggc gcgatgaagc tcttgccgtt
     7981 gatgcgcgcc aaaggctcgg cgcgggcgga cgcggcgagg ctgaggagga ggacaaggag
     8041 gagcatgagc aatggccctc gccacccgcg aagcgggggg agagggaggg gacccgcgcg
     8101 aagcgcgggg agagtgaggt gggtcatgga cctgtcagct caagcatcgc cttcttaccc
     8161 tacaccacct cacctaccca ttgcttcgca atgggtccct tcctctcccc cgctgacgcg
     8221 gcggagagga cgcatgacaa tgccttcaac cgcgctaatg tctgcgccgc catgcttctc
     8281 gcctccctgc tcgtgccgct cgccgtcgtg gcgatcgtgt tcctcatcca gcgcctgcgc
     8341 attcccgcct tcctcgccat catggccacg gtcgtggtct atggcattgc cgccgacatg
     8401 accttcatgt cggtcggcaa ggcgttcggg ctgggcttca ccgcagcgct cgagcaggcg
     8461 ggccttttgg tggtggcggg tgcgctcgtc ggtgcgctgg tgctgcgcca gccgctcggc
     8521 accggcacct cggccatcgc cggcgcgctc gctggcctcg gcgcctcggc gacgggcggc
     8581 ctcgctcttc tgcagccggc cggccaggag gcgccgcggc gcgcgctcgg ccttgccctc
     8641 accctgctcg cctgcagcgc cctggtgccg ccctcgccgc ttgccgtcgc cgcggcctcg
     8701 gtgatgaagg caagcagctc gaccgtcttg accattgtcc tgcccgtcgc cgtgatcgcc
     8761 tcactattgg gatggtggca tgtcgcgcgc caagtgccgg cggccgacag cccgggccgg
     8821 ctcgactgga cctggctcgc cgtcggcctt ccgatcgcgc tcctgatctt acaatcggtg
     8881 gcgcagatgc cgagcgagcc gctgggcaag ggcggcgcgc gcgaattcta tatcggcatc
     8941 agcaagcccg tgatgctggc ggccatggcc atcaccttgg ccgtgctgtt tgccggacgc
     9001 tggcagccgt cggcgctggc cggccgcagc tgggctcccc tgttgctggc ggtcggcgcg
     9061 tcgggtggcc tgtcccgcgt gttcgacgag accggcatgg cggagctttt agccgagcat
     9121 gcactgcagc cgcgcttcgg actgctgacg ccgtttgtcg ccgcggcgat cgtcaagacc
     9181 ctgcagggca attcgctgac cgcggtgctc acggcctccg gcatggtcga gcccatgctg
     9241 ccggcgttgg ggctcgacag cgccacgggt cgcgcgctcg ccgccgccgc ggtcggcgcg
     9301 ggctcgatgg cgatctgcca cgtcaacgat cccttgttct ggatcgccgc cgccatgggc
     9361 cggctgtcgc cgggacgggc gctcgcggtg atctcgctcg gcagcgcggt gatggcgacc
     9421 ggcgcgctgg tcgtgctggc ggcggtgaag cagtttc
//
LOCUS       DASWGA010000126         2972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2421049, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000126 DASWGA010000000
VERSION     DASWGA010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2421049"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..1118
                     /locus_tag="VF991_03110"
     CDS             84..1118
                     /locus_tag="VF991_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEX9555456.1"
                     /translation="MTMFRPGSRNLITDVDGILVGNVEDQRLRSGVSVVLCETPSVAS
                     VDVRGGAPGTRETDLLDPASRNERIDAICLSGGSAFGLSAADGVMRWLKERGRGVPVA
                     GAIVPIVPTAILFDLLNGGDKNWDWPPYRELAYAAAGKAARDFALGNAGVGLGAKAGN
                     LKGGLGSASAVGAANGLQVGALVAVNARGYTTMGDMPQFWAWALEQDREFGGLPPPAH
                     GLALPVSHSRADLTHDPADAARSDPRANTTIAVVATNARLDKASAKRLAVMAQDGLAR
                     SIRPVHTPQDGDTVFAIATGRHEMGDDPLALGELGTLAADCLARAVARGVYNAATLGA
                     ARGWRDVFGR"
     gene            1149..2645
                     /locus_tag="VF991_03115"
     CDS             1149..2645
                     /locus_tag="VF991_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555457.1"
                     /translation="MNAFSRRQLLGAASALATVSALGVEARAQAKDRLVIGMSLEPPV
                     LDPTKNAAAAIREVTTPSIFESLGRIDRTGAVGPGLAESWNVAEDGKEYIFKLRPNVK
                     FHDGESLDASVVKFSLDRLFAPDSTNPAKSLYTDIDKVEIVDPSTVKVTLKSPNSFLL
                     YSLSLGDAGIMHPKSAPTNDKHPVGTGPFMFKERKEGDSITLVRSPTWRDPGSIKLNT
                     VIFKIVKDPSAQVNALLAGDVDAFPGFQAPELVERLRKDPRFVVVVGTTEGEVILATN
                     NSKKPFSELKVRQAIAHAINRDELISAESGFGVPIGSHFAPHNKAYLDLTKTYPFDIA
                     KAKALLAEAGYAGGFDASLKLPPVGYAQRAGEVIASQLGKIGIKVAITQLQWPQWLSE
                     VFKERNYDLTIVAHTEANDLDRYARDGYYWGYDSPEFKAKWREVVAATDFAKRDELLK
                     QAQRIVARDAVNGFLFQLAKIGVWKKDLVGMWENAPAPQVDLTGVYWK"
     gene            2735..>2972
                     /locus_tag="VF991_03120"
     CDS             2735..>2972
                     /locus_tag="VF991_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9555458.1"
                     /translation="MLEFLSRRLAAALVTLALATVVVFAVVEVLPGDPALVMLGTDAR
                     PDTLAALRAKYGFDQPLAVRYLRWIGGLLTFDLGS"
BASE COUNT          494 a         1014 c          971 g          493 t
ORIGIN      
        1 cggcctatct caaggcgctg accttgcagc tcgactgata tgttgctgat ctctcacaca
       61 cggctgctgc caggatgaca ggtatgacta tgtttcgtcc tggctctagg aatctcatca
      121 ccgacgtcga cggcatcctg gtcggcaacg tcgaggacca gcgcctgcgc tccggcgtca
      181 gcgtcgtgtt gtgcgagacc ccgtcggtcg cgtcggtcga cgtccgcggc ggcgcgccgg
      241 gcacgcgcga gaccgatctg ctggatcccg cttcgcgcaa cgagcgcatc gatgcgatct
      301 gcctgtccgg cggttcggcg ttcggcctgt cggcagcgga tggcgtgatg cgctggctga
      361 aagagcgcgg ccgcggcgtg ccggtcgcgg gtgccatcgt gccgatcgtg cccacggcca
      421 tcctgttcga cctgctgaac ggcggcgaca agaactggga ctggccgcct tatcgtgagc
      481 ttgcctatgc ggcggcgggc aaggccgctc gcgacttcgc gctcggcaat gcaggcgtgg
      541 gcctcggcgc aaaagccggc aacctcaagg gcgggctggg cagcgcctcg gcggtcggtg
      601 cagcgaatgg cctgcaggtc ggcgctctgg tggcggtcaa tgcgcgcggc tacacgacca
      661 tgggcgacat gccgcaattc tgggcgtggg cgctggagca ggatcgcgaa ttcggcggcc
      721 tgccgccgcc cgcgcacggt ctcgccttgc cggtctctca cagccgcgcc gatctcacgc
      781 acgatccggc ggatgccgcg cgcagcgatc cgcgcgccaa caccaccatc gccgtggtcg
      841 cgaccaatgc ccggctcgac aaggcttccg ccaagcggct ggcggtgatg gcgcaggacg
      901 ggctcgcccg ttcgattcgc cccgtgcaca cgccgcagga tggcgacacg gtgttcgcca
      961 tcgccacggg caggcacgag atgggggacg acccgctggc gctgggcgaa ctcggcacgt
     1021 tggctgcgga ttgtctcgcc cgcgccgtgg cgcgcggcgt ctacaacgcc gccacgctcg
     1081 gcgcggcgcg cggctggcgg gacgtgttcg gccgctgata aactgccgca actgaacagg
     1141 agtgatccgt gaacgcattt tcccgccgcc agctgctcgg cgccgcaagc gccctggcga
     1201 ccgtgtccgc tctcggcgtt gaagcgcggg cccaggccaa ggaccggctg gtgatcggca
     1261 tgtcgctcga gccgccggtg ctcgatccga ccaagaacgc ggcggccgcc atccgcgagg
     1321 tcaccacgcc cagcatcttc gagagtctgg gccgcatcga ccgcaccggc gccgtcggtc
     1381 ccggcctggc ggagagctgg aacgtcgccg aggacggcaa ggaatatatc ttcaagctgc
     1441 gtccgaacgt gaagttccac gacggcgaat cgctcgatgc ctcggtggtg aaattctcgc
     1501 tcgaccggct gttcgcgccc gattcgacca atcccgccaa atcgctctac accgacatcg
     1561 acaaggtcga gatcgtcgat ccctcgaccg tcaaggtgac cctgaagtcg cccaactcct
     1621 tcctgctcta cagcctgtcg ctgggcgacg ccggcatcat gcatcccaag tccgcgccga
     1681 ccaacgacaa gcacccggtg ggcaccgggc cgttcatgtt caaggagcgc aaggagggcg
     1741 attcgatcac cctggtcagg tcgccgacct ggcgcgatcc cggctcgatc aagctcaaca
     1801 cggtgatctt caagatcgtc aaggatcctt cggctcaggt gaacgctttg ctggcgggcg
     1861 acgtcgatgc cttcccgggc ttccaggcgc ccgagctggt cgagcgcctg cgcaaggatc
     1921 cgcgcttcgt cgtcgtcgtc ggcacgaccg agggcgaggt catcctggcg accaacaact
     1981 ccaagaagcc gttcagcgag ctgaaagtgc gccaggcgat cgcccacgcc atcaaccgcg
     2041 acgagctgat ctcggccgaa tcgggcttcg gcgtgccgat cggcagccac ttcgcgccgc
     2101 acaacaaggc ctacctcgat ctcaccaaga cctatccgtt cgacatcgcc aaggccaagg
     2161 cgcttttagc cgaagcgggc tatgccggcg gcttcgacgc cagcctaaaa ctgccgccgg
     2221 tcggctatgc ccagcgcgcc ggcgaggtga tcgccagcca gctcggcaag atcggcatca
     2281 aggtcgcgat cacccagttg cagtggccgc aatggctctc cgaggtgttc aaggagcgca
     2341 actacgacct cacgatcgtc gcccacaccg aggccaacga tttggatcgc tacgcccgcg
     2401 acggctacta ctggggctac gattcgcccg agttcaaggc caagtggcgc gaggtcgtcg
     2461 ccgccaccga cttcgccaag cgcgacgagc ttctaaaaca ggcacagcgc atcgtcgccc
     2521 gcgacgcggt gaacggcttc ctcttccagc tcgccaagat cggcgtgtgg aagaaggacc
     2581 ttgtaggcat gtgggagaac gcgccggcgc cgcaggtcga cctgacgggc gtctattgga
     2641 aatagatccg gtgtcatccc gagcgcagcg agggaccttt gaggccaagg gaaaggtccc
     2701 tcggccttcg gcctcgggat gacaactttg cgccatgctt gaattcctct cgcgccgact
     2761 cgccgccgcg ctggtgaccc tggcgctggc cacggtcgtg gtgttcgctg tggtcgaggt
     2821 cctgccgggc gatccagcgc tggtcatgct gggcaccgac gcgcggcccg acacgttggc
     2881 cgcactcagg gccaagtacg gcttcgacca gccgctggcc gtgcgctatc tccgctggat
     2941 aggcggcttg ctgaccttcg atctgggcag ca
//
LOCUS       DASWGA010000127         2491 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_18165, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000127 DASWGA010000000
VERSION     DASWGA010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18165"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..851)
                     /locus_tag="VF991_03125"
     CDS             complement(<1..851)
                     /locus_tag="VF991_03125"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9555459.1"
                     /translation="MAEFRSWDRETDIVVVGSGAAALAAALAASVGGAGVVILEKAAV
                     LGGTTAMSGAGTWVPANHHMLAAGLSDSRDEALRYLRATAPAGWHEEEDALWQSFVEQ
                     APEMLEFIEANTPLEFELVHHPDLYSEAVGGKFRGRMVSPRALSRNLVGRWRNRIRRS
                     TLPQIFTYRELVIGTVLSRPLRTLAGMAPRLIHRVLTRRVGMGNALVVGLLRGCLDHG
                     CEIMAETAAERLLTEDDERGRVVGIEARAGSRTMAIRARKGVVLATGGFEWDEQRRNR
                     HFPGETGL"
     gene            complement(1013..>2491)
                     /locus_tag="VF991_03130"
     CDS             complement(1013..>2491)
                     /locus_tag="VF991_03130"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555460.1"
                     /translation="HADLKILDPQTNTATITLMHGLMVYDMLYSWDEDLKPRPQMVES
                     EAISADKLTYTFVLRPGLKFHDGSAVTTRDVIPSLKRWMVRDVMGQKLAQFASEMRAV
                     DDKTFVLQLKEPFPFVEIALGASGGTMPVILREKEAMTDPFTNITEAIGSGPFRFVRS
                     EWVPGAKVVYEKNPDYIPRAEPASGLAGGKVVKVDRVEFNVLPDPTTKATALQSGEID
                     IIDQTPHDQAGLLEKVPGIVVDILPKIANYGLLRPNSLYPPFNNVKARQALAMMVNQE
                     DYMAAAFGDKKWWRACFSYFVCDSPNGTEAGSDAYRKQNIARAKELLAESGYKGEKII
                     MLSTHEIASIGALGDVTAANLKAIGMNVEIAETDWGTLVARRANKNAPDQGGWNIFHT
                     TAGGSGMYSPLTNFGTDQSCGAKNWFGWPCDETAETLRTAYIKESDPEKQREALDALQ
                     ARELESVPFVLVGQYRQPTVWRKNISGLLRSNIIVFWNVAKS"
BASE COUNT          392 a          806 c          828 g          465 t
ORIGIN      
        1 agcccggtct cgccgggaaa atgccggttg cggcgctgct catcccattc gaagccgccg
       61 gtcgccagga cgacgccttt ccgggcgcgg atcgccatgg tgcgactgcc ggcgcgcgcc
      121 tcgatgccga cgacgcggcc gcgctcgtcg tcttcggtga gcagccgttc cgccgccgtc
      181 tcggccatga tctcgcagcc gtgatcgagg cagcccctga gcagaccgac gaccagtgcg
      241 ttgcccatgc cgacgcgccg cgtcaggacg cggtggatga gacgcggcgc catcccggcg
      301 agcgtccgca gcggccggct cagcaccgtg ccgatgacga gctcgcgata ggtgaagatc
      361 tgcggcaagg tcgagcggcg aatgcggttg cgccagcgcc cgacgagatt gcggctgagc
      421 gcccgcgggc tgaccatgcg gccgcggaac ttgccgccaa ccgcctcgga ataaagatcg
      481 ggatggtgga cgagctcgaa ttcgagcggc gtgttcgctt cgatgaattc gagcatctcg
      541 ggcgcctgct cgacgaagga ttgccagagc gcgtcctcct cctcgtgcca ccccgccggc
      601 gcggtggcgc gcaaatagcg cagcgcttcg tcccgcgaat cactcagccc cgccgccagc
      661 atgtgatggt tggcgggaac ccacgttccc gcccccgaca tcgccgtcgt gccgccgagc
      721 accgccgcct tctcgagaat gacgacaccg gcgccgccga ccgaggcggc aagtgccgcc
      781 gctagcgccg ccgcgcccga gccgacgacg acgatgtcgg tctcgcggtc ccaggatcgg
      841 aattccgcca tctcgtgcgt ggttcctcca aagtcagcct gcttcggtgc cacgagccac
      901 atggcgatcg aatgggattg ggcgccaaat cagcgcacgc gtcgatccct gattgcggcc
      961 gtgcttgtgg cgacggccga tttcttcgac agcagcggcg ggggtggccg cgtcagctct
     1021 tggcgacgtt ccagaacacg atgatattgg agcgcagcaa accgctgatg ttcttgcgcc
     1081 agaccgtcgg ctggcggtac tggccgacga ggacgaaggg aaccgactcc agctcgcgtg
     1141 cttgcaacgc gtccagcgcc tctctttgtt tctcggggtc gctctccttg atataggcgg
     1201 tgcgcagagt ctcggccgtc tcgtcgcatg gccagccgaa ccagttcttg gccccgcaac
     1261 tctgatcggt gccgaaattg gtcagaggcg agtacatgcc ggagccgccc gccgtggtat
     1321 ggaagatgtt ccagccgccc tgatccggcg cgttcttgtt ggcgcgccgg gcgaccagcg
     1381 tgccccaatc ggtctcggcg atttcgacat tcatgccgat cgctttcagg ttggccgcgg
     1441 tgacgtcgcc gagggcgccg atgctggcga tctcatgcgt gctgagcatg atgatcttct
     1501 cgcccttgta gccgctctcg gcgagtagct ccttggcgcg ggcgatgttc tgcttgcgat
     1561 aggcgtcaga cccggcttcg gtgccgttcg ggctgtcgca gacgaagtat gagaagcagg
     1621 cgcgccacca tttcttgtcg ccgaaggcgg cggccatgta gtcctcctgg ttgaccatca
     1681 tggccagcgc ctggcgcgcc ttcacgttgt tgaagggcgg atagaggctg ttcggccgca
     1741 ggaggccgta attggcgatc ttgggcagga tatcgacgac gatgcccggc accttctcga
     1801 gaagcccggc ctggtcgtgc ggcgtctggt cgatgatgtc gatctcgccg ctctgcaacg
     1861 ccgtcgcctt ggtggtgggg tccggcagga cgttgaattc gacgcgatcg accttgacga
     1921 ccttgccgcc ggcaagaccg ctcgccggct cggcgcgcgg tatataatcg gggttcttct
     1981 cgtagacgac cttggccccc ggcacccatt cggaccgcac gaagcggaac ggtcccgagc
     2041 cgatcgcctc ggtgatgttg gtgaagggat cggtcatcgc ctccttttcg cgcaggatga
     2101 ccggcatcgt gccgccgctg gcgccaagcg cgatctcgac gaaggggaag ggctccttga
     2161 gctgaagcac gaacgtcttg tcgtcgaccg ccctcatctc gctggcgaac tgggccagct
     2221 tctggcccat gacgtcgcgc accatccagc gcttgagtga cgggatgacg tcgcgcgtcg
     2281 tcactgccga gccatcgtgg aacttgaggc cgggccgcag gacgaaggta taggtcagct
     2341 tgtcggcgga aatggcctcg ctttcgacca tctgcggccg tggcttgaga tcctcgtccc
     2401 aggaatagag catgtcgtag accatcagcc cgtgcatcag cgtgatggtt gccgtattgg
     2461 tctggggatc gagaatcttg agatcggcgt g
//
LOCUS       DASWGA010000128         1899 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1407487, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000128 DASWGA010000000
VERSION     DASWGA010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407487"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..378
                     /locus_tag="VF991_03135"
     CDS             <1..378
                     /locus_tag="VF991_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F420-dependent glucose-6-phosphate
                     dehydrogenase"
                     /protein_id="HEX9555461.1"
                     /translation="EGLAAAGPRSQPYDHMIELKVSFDSDAARAREDTRHWAALALTP
                     EEKVSVEDPMEMQRLAEALPIERAASRWIVSSDPDEQVDKIAAYVDLGFRHLVFHAPG
                     PDQSRFLKLYGEQVLPRLRKRFG"
     gene            375..1148
                     /gene="cofE"
                     /locus_tag="VF991_03140"
     CDS             375..1148
                     /gene="cofE"
                     /locus_tag="VF991_03140"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043773 - coenzyme F420-0 gamma-glutamyl
                     ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HEX9555462.1"
                     /translation="MTRTAAVELLAVPGLPMIKPGDDLAAIISDGLVRGGLQPRANDV
                     MVIAQKIVSKAEGRSVELATVKPSARAVALAKEIQKDPRLVELILSESVRVVRSRPNV
                     LIVEHRLGFVMANAGIDQSNVGPTDGVERALLLPVNPDGSAEALRARLSAQHGVALAV
                     IITDSFGRAWRRGTAGVAIGAAGLPALLDLRGNPDLFGRTLQVSISGFADEIAAAASL
                     VMGQGDEAQPVVLVRGLAWTAPANPAAELVRPASEDMFR"
     gene            1159..>1899
                     /locus_tag="VF991_03145"
     CDS             1159..>1899
                     /locus_tag="VF991_03145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043743 - LPPG:FO 2-phospho-L-lactate
                     transferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate transferase CofD family
                     protein"
                     /protein_id="HEX9555463.1"
                     /translation="MKGGLVVALSGGVGGAKLALGLSRVLPAQELLIVANTGDDFEHL
                     GLSISPDIDTLTYVLAGLDNPVTGWGRRDETWSFMETIGALGGADWFRLGDRDLALHV
                     ERTRRLKAGETLSQVTADLCRRLGIGTRVLPMSDDRVRTYVLTDDGAVTFQDYFTQLG
                     CEPAVHGFQYAGADAARIPDELIEALHADDLEAVVICPANPYHVIRPILEIEGMKDLL
                     RRRRAPVIAVTPIIGGRALKGSAAKMMRE"
BASE COUNT          295 a          644 c          658 g          302 t
ORIGIN      
        1 gaaggactgg ccgccgccgg gccgcgctcg caaccctacg accacatgat cgagctaaaa
       61 gtctcgttcg acagcgatgc cgcgcgcgcc agggaggaca cgcgtcactg ggcggcgctg
      121 gcgctgacgc cggaagagaa ggtgtcggtc gaagatccaa tggagatgca gcgcctggcc
      181 gaggccctgc cgatcgaacg cgccgccagc cgttggatcg tctcgagcga ccccgacgag
      241 caggtcgaca agatcgccgc ctatgtcgat ctcggctttc gccatctcgt gttccatgcg
      301 cccggtccgg accagtcgcg gttcctgaaa ctgtacggcg agcaggtgct gccccgcctg
      361 cgcaagcgtt tcggatgacc cgaaccgccg ccgtcgagct tttagcagtc cccggcctgc
      421 ccatgatcaa gccgggcgac gatctcgccg ccatcatctc cgatggactg gttcgaggcg
      481 gcctgcagcc gcgcgccaac gacgtcatgg tcatcgccca gaagatcgtg tccaaggcag
      541 aaggccgcag cgtcgagctg gcgacggtaa aaccttcggc gcgggccgtc gccttggcca
      601 aggagatcca gaaggacccg cgcctggtcg agctgatcct gtccgaatcg gtgcgcgtcg
      661 tgcggtcgag acccaacgtg ttgatcgtcg agcaccgcct gggcttcgtc atggccaatg
      721 ccggcatcga ccagtccaat gtcgggccga ccgacggcgt cgaacgcgct ttgctgctgc
      781 cggtcaatcc cgacggcagc gccgaagcct tgcgggcacg cctttccgcc cagcacggcg
      841 tggcgctggc ggtgatcatc accgacagtt tcgggcgggc gtggcggcgc ggcacggcgg
      901 gcgtcgccat cggcgcggcc ggcctgccgg cgcttttgga cctgcgcggc aatcccgacc
      961 tgttcggccg caccctgcag gtcagcatca gcggctttgc cgacgagatc gccgccgccg
     1021 cctcgctggt gatgggccag ggcgacgaag cgcagcccgt cgtgctggtg cgcggcctgg
     1081 cctggacggc gccggcgaat cccgccgccg agctggtccg gccggcgagc gaggacatgt
     1141 tccggtgagc cccattcaat gaaaggcggc ctggtggtgg cgctgtcggg cggtgtcggc
     1201 ggcgccaagc tggcgcttgg cctcagccgc gtgctgcccg cgcaggaatt gctgatcgtc
     1261 gccaatacgg gtgatgattt cgagcatctc ggcctcagca tctcgccgga catcgacacg
     1321 ctgacctacg tgttggccgg cctcgacaat ccggtgaccg gctggggccg ccgcgacgag
     1381 acctggtcgt tcatggagac aatcggcgca ctgggcggcg cggactggtt ccggctcggc
     1441 gatcgcgacc ttgcgctgca tgtcgagcgc acgcgccggc tgaaggccgg cgagacgctg
     1501 tcgcaggtga cggccgacct gtgccggcga ctgggcatcg gcacgcgcgt gctgccgatg
     1561 agcgacgacc gcgtgcgcac ctacgtgctg accgatgacg gcgcggtcac cttccaggac
     1621 tacttcacgc agctcggctg cgagcctgcc gtgcacggct tccagtacgc cggcgcagac
     1681 gccgcgcgca ttccggatga actcatcgag gccctgcatg ccgacgatct ggaggcggtg
     1741 gtgatctgcc cggcgaatcc gtaccacgtc atccggccga tcctcgagat cgagggcatg
     1801 aaggatttgc tgcgccggcg ccgcgctcca gtgatcgcgg tgacgccaat catcggcggc
     1861 cgggcgctca agggttcggc ggccaagatg atgcgcgag
//
LOCUS       DASWGA010000129         3658 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_645216, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000129 DASWGA010000000
VERSION     DASWGA010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3658
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_645216"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..870
                     /locus_tag="VF991_03150"
     CDS             <1..870
                     /locus_tag="VF991_03150"
                     /inference="COORDINATES: protein motif:HMM:NF012425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase family peroxidase"
                     /protein_id="HEX9555464.1"
                     /translation="FQSNGNGTALSKAQVFAPGTVPVIGRFSTGGGQPYAPDGRLVFH
                     AIALSLTQANGELWRMAMDHTPIFVVATPQAFRDFQLATAPDPATGKADPARTADFLA
                     HHPETRAFMDWMRDAPLPSSFANGSYFSINAFRFTNQAGETRHVRWSLVPETPFEALD
                     KSKLGELGADFLFEDVAARLRQGALRWHMVVTVAAPGDPVDDATKAWPADRQQIDVGT
                     LTIDRTEAEETGACRNITFDPLILPAGMAPSADPLLPARSAVYAVSLTRRDGEAAEPS
                     AAGRNPALRKTAP"
     gene            867..1400
                     /locus_tag="VF991_03155"
     CDS             867..1400
                     /locus_tag="VF991_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEX9555465.1"
                     /translation="MKPVAQFSLALRLVHWLMATLVVAMLFIGIAMVSTVSEMRTWLI
                     DLHKPLGILILCLAAIRVCLRLIGPVPELPVDLPAWQKWAAHGSHLVLYALMFALPLV
                     GWTMLSAGGYPIALFGSVHLPPLVAVNPALFALLRRAHTLLALVLFLTILMHFGAALF
                     HAWLRRDGVFRSMVPWR"
     gene            complement(1311..1850)
                     /locus_tag="VF991_03160"
     CDS             complement(1311..1850)
                     /locus_tag="VF991_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX9555466.1"
                     /translation="MLVQLAEHTVGIAFDRMFILISVQGDVAPSIDPSEVLPPTTRRR
                     TPLQKWRLKRVIDHVDGHLARRITLADMAAAAGLTRMHFAAQFRTATGTRPHDFVLQR
                     RIDRARELLRNPERTLVDVALSVGFQTQAHFTTVFKRFAGETPHRWRRLAPGHHAAED
                     AVAPQPGVEQGGAEMHQDG"
     gene            complement(1956..3020)
                     /locus_tag="VF991_03165"
     CDS             complement(1956..3020)
                     /locus_tag="VF991_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX9555467.1"
                     /translation="MISDTPDAKPVTVLAHAARVLPAVTVDTYNEELRDEEGFVGDRA
                     SGRAFRAILEDWRDKLRAQGEDPFGDMPTQDISKSKLDKVLAGDDPLAAGLVHTAVEE
                     YAVELATVVRRFLRLKDWQDTERIVVGGGLSASHIGELAMGRAAVLLAGERVAVELRT
                     ITNNPDKAGLIGTVHLAPSWVLAGHDAILAADVGGTNLRVGVVELNFKKGDLSKAAVW
                     KYLHWRHRDDQPTREQALERMADMANELIGLAAKEKFKLAPFVGIGCPGLIDENGVIV
                     TGGQNLPGNWEGPDFNLAREMTHRLPHLEGHEPVVVMHNDAVVQGLSEIPNVTDVRRW
                     GVLTIGTGLGNARFTNRDKE"
     gene            complement(3128..>3658)
                     /locus_tag="VF991_03170"
     CDS             complement(3128..>3658)
                     /locus_tag="VF991_03170"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEX9555468.1"
                     /translation="RDTGKSDLNPHDALVLLTADHNEIDKLAREFERHRKTAGQVEKG
                     KLALRICHALTLHGTIKKEVFYPAAEAVLEGDDQELLGKLRIEQDELRHLIAKIENMP
                     SDHPSFDSAVMVLAERAARHMKKEEDEIFPRLRHSRLDLIGTGERMAARKTQLATAPI
                     GRRLIRQARKVMGGGR"
BASE COUNT          552 a         1254 c         1175 g          677 t
ORIGIN      
        1 ttccagtcca acggcaacgg aacggcgctg tccaaagccc aggtttttgc gcccggcact
       61 gttccggtga tcggccggtt ctcgaccggc ggcggccaac cctatgcgcc cgacggccgc
      121 ctcgtcttcc acgccatcgc gctcagcctg acccaggcca acggcgagct gtggcgcatg
      181 gcgatggacc acacgccgat cttcgtcgtc gccacgccgc aggccttccg cgatttccag
      241 ctcgccacgg cgcccgaccc ggcgaccggc aaagccgatc cggcgcgcac cgccgatttt
      301 ctcgcccatc atccggagac acgcgccttc atggactgga tgcgcgacgc gccgctgccg
      361 tcgagcttcg ccaacggcag ctatttcagc atcaatgcct tccgcttcac caaccaggcg
      421 ggcgagacgc ggcatgtccg ctggtcattg gtgcccgaga cgccgttcga ggcgctcgac
      481 aagagcaagc ttggcgagct cggcgccgat ttcctgttcg aggatgtcgc cgcacgcctg
      541 cgccagggtg cgttgcgctg gcacatggtc gtcactgtgg cagcgcccgg cgatcccgtc
      601 gacgacgcca ccaaggcgtg gccggccgac cgccagcaga tcgatgtcgg cacgctcacc
      661 atcgatcgca ccgaagccga ggagacgggc gcctgccgca acatcacgtt cgaccctttg
      721 atcctgccgg ccggcatggc gccgtcggcc gacccgcttt tgccggcgcg atcggccgtc
      781 tatgccgtct cgctgacgcg acgcgacggc gaagcggcgg agccaagcgc cgccgggcgc
      841 aaccctgccc tccgcaagac cgcaccatga agcccgttgc gcaattctcc ctcgccttgc
      901 gcctggtgca ctggctgatg gccacgctgg tcgtcgccat gctgttcatc ggcatcgcca
      961 tggtgtcgac ggtgtcggag atgcggacct ggctgatcga cctgcacaag ccgctcggca
     1021 tcctgatcct gtgcctggcc gcgatccggg tgtgcctgcg cctcataggg ccggtgccgg
     1081 agctgccggt cgacctgccg gcctggcaga aatgggcggc gcatggctcg cacctcgtgc
     1141 tctatgcgct gatgttcgcc ctgccgctgg tcggttggac gatgctgtcg gccggcggat
     1201 atcccatcgc cttgttcggc agcgtgcatc tgccgccgct tgtcgccgtc aatccggcgc
     1261 tgttcgccct gctgcggcgg gcgcacactc ttctcgccct tgtcctcttc ctaaccatcc
     1321 tgatgcattt cggcgccgcc ctgttccacg cctggctgag gcgcgacggc gtcttccgca
     1381 gcatggtgcc ctggcgctag acgccgccaa cggtgagggg tctcgccggc aaagcgcttg
     1441 aagaccgtgg tgaaatgggc ctgcgtctgg aagccgacgc tcagcgcgac atcgaccagc
     1501 gtccgttcgg gattgcgcag cagctcccgg gcgcggtcga tccgtcgctg caggacgaag
     1561 tcgtgcggcc gcgtccccgt ggcagtccgg aactgggcgg caaagtgcat gcgggtgagg
     1621 ccggcggctg ccgccatgtc ggccaaggtg atgcgacggg cgagatggcc gtcgacgtgg
     1681 tcgatgaccc gtttcagccg ccacttctgg agcggcgtgc gacggcgagt cgtcggcggc
     1741 agaacctcgg acggatcgat cgatggggcg acatcgccct gcaccgaaat caggatgaac
     1801 atccgatcga aggcgatccc gaccgtatgt tccgccaact gaaccagcat cgcctgccct
     1861 cctgtggaga ccgcaggcga agctcacatc gtttggcgac cggcatccat tctacgcacg
     1921 gtcggtcgac ctatacttgc gtatgtcggc agcgctcatt ccttgtcgcg gttggtgaag
     1981 cgcgcgttgc ccaggccggt gccgatcgtc aggacgcccc agcgtctcac atccgtcacg
     2041 ttggggattt cgctcaggcc ctgcacaacc gcgtcgttgt gcatgacaac gacgggctca
     2101 tggccttcga ggtgcggcag ccggtgcgtc atttcgcgcg cgaggttgaa atcgggacct
     2161 tcccagttgc cgggcaggtt ctggccgccg gtcacgatca cgccgttctc gtcgatcaga
     2221 ccgggacagc cgatgccgac gaacggtgcc agcttgaact tttccttcgc agccaggccg
     2281 atcaactcgt tggccatatc cgccatgcgc tccagcgcct gctcgcgcgt cggctgatcg
     2341 tcgcgatgcc gccaatgcag gtacttccat accgccgcct tcgacaggtc gcccttcttg
     2401 aaattgagct cgacgacgcc gacccgaaga ttggtgccgc cgacatccgc cgccaggatg
     2461 gcgtcgtggc cggccagcac ccagctcggc gcaagatgaa cggtgccgat cagaccggcc
     2521 ttgtcgggat tgttggtgat ggtacgcaat tcgacggcga cgcgttcgcc cgccagcagc
     2581 acggcggccc ggcccatcgc cagctcgccg atatggctgg cgctcagccc gccgccgacg
     2641 acgatgcgct cggtgtcctg ccagtccttc aatcgcagga aacgccggac gacggtggca
     2701 agctcgacgg catactcttc gaccgctgta tgcaccaagc cggccgccaa gggatcgtcg
     2761 ccggccagta ccttgtcgag cttcgacttg gagatgtcct gggtcggcat gtcgccgaaa
     2821 ggatcctcac cctgcgcccg caacttgtcg cgccagtcct cgaggatggc gcgaaacgca
     2881 cggccgctgg cccggtcgcc gacgaagccc tcttcgtcgc gcagttcttc gttataggtg
     2941 tcgaccgtca cggccggcag cacgcgcgcg gcgtgtgcaa gcactgttac cggcttggcg
     3001 tccggcgtgt cggagatcat ggtgctgtcc ggaatggcgg cctccccact gcggcgtgcg
     3061 ctcgggccgc cgttactcgt caacggaacc gggtcgcggg cggttgccat caaagtcgcc
     3121 gggggcccta ccggccgccg cccatgactt tcctggcttg gcggatcagc cggcgaccga
     3181 tcggcgccgt cgcgagctgg gtcttgcggg cggccatgcg ttcgccggtg cctataagat
     3241 cgaggcggga atggcgcagc cggggaaaga tctcgtcttc ctctttcttc atgtggcgcg
     3301 cggctcgttc ggccagcacc atgaccgccg aatcgaaaga ggggtggtcg gacggcatgt
     3361 tctcgatctt ggcgatcagg tgtcgcaatt cgtcctgctc gatccgcagc ttgcccaaca
     3421 gttcctggtc gtcgccttcg agcaccgctt cggcggcagg atagaaaact tcctttttga
     3481 tcgtgccatg cagggtcagg gcatggcaga tcctgagcgc cagcttgccc ttttcaacct
     3541 gaccggccgt cttgcgatgg cgctcgaact cgcgggccag cttgtcgatt tcgttgtgat
     3601 cggcggtcag caggaccagg gcgtcatgcg gattgaggtc cgacttgccg gtgtcgcg
//
LOCUS       DASWGA010000130         2787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1788367, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000130 DASWGA010000000
VERSION     DASWGA010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1788367"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..567
                     /locus_tag="VF991_03175"
     CDS             <1..567
                     /locus_tag="VF991_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9555469.1"
                     /translation="DTGSDCVGTSNRQGAASVTQLEVMPQPPDKENKGLVWPDWPLKM
                     RTSSSHEEGVERDFAVLTKRAVGKNGKIEALECARIDWAKGADGRMAMVEVEGSRFEL
                     KADLVLLAMGFLGPRQPGMVEQAGVALDVRGNVAANVNDYRTSVPKLFAAGDMRRGQS
                     LVVWAIREGRQCARSIDESLMGSTTLPR"
     gene            664..1182
                     /locus_tag="VF991_03180"
     CDS             664..1182
                     /locus_tag="VF991_03180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555470.1"
                     /translation="MATDKKKNADTKSPEKKNNDKKILAFVERCDNAGDLESLIKNAT
                     RLGNAAVAEAAFRKRISLVPAERPGSVEHDFWQMVQAFEHALSEERGKTTRLSRTRQK
                     AAKVGVVQTLRDWAANSQETSGFRMLLERGMPEFTGEAITLRHPDLFEPPVLEAAQQR
                     LRVAGVDLTSLR"
     gene            1372..1812
                     /locus_tag="VF991_03185"
     CDS             1372..1812
                     /locus_tag="VF991_03185"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF003807.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEX9555471.1"
                     /translation="MKLLLIQGANMEYLGRRQPELYGTTTAKELDAILRRQARRLDVT
                     LDILYTNTEGEAVTAIYKADRANIDGILFNPAGFLHAGHALRDCLKSIRAPAIEIHMT
                     NIEKRGYGSVTSEAAVGMIAGFGVDSYVLALEAMVSRLRKLAGG"
     gene            1824..2315
                     /locus_tag="VF991_03190"
     CDS             1824..2315
                     /locus_tag="VF991_03190"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX9555472.1"
                     /translation="MSKRRGGCLCGAVRYEFTGKPRLGVSCFCRDCQYVSGGAPAHAM
                     IVARQDLMVTGATKTYWTEAESGRRVAREFCAICGTPLFAYTEKKPGRVALTVGSLDD
                     PSDFKPQLAIWMSSAQPWHTLDISLPRFQRLPRVGKYIIGEVLVAGLIKLARIIRPDA
                     ARG"
     gene            2321..>2787
                     /locus_tag="VF991_03195"
     CDS             2321..>2787
                     /locus_tag="VF991_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HEX9555473.1"
                     /translation="MTAADWPELPFAAWADTCNTLHLWTQVVGKIRLAHAPMINHWWQ
                     VPLYVGSRGLSTSPIPYGGESFQIDFDFIDHRLEIRTSRGEIDGFALGPRSVADFHRE
                     IMARLSGLGLQTRIWTMPVEIEGAIPFERDSDHRSYDAAYVHRFWRILLQVNRL"
BASE COUNT          520 a          880 c          922 g          465 t
ORIGIN      
        1 gataccggct cggactgcgt cggcacgtcg aatcgccagg gtgctgcttc ggtgacccag
       61 ctcgaggtca tgccacagcc gccggacaag gagaacaagg ggctggtctg gccagactgg
      121 cccttgaaga tgcggacttc gtcctcacat gaagaaggcg tcgagcgcga cttcgccgtg
      181 ctgaccaagc gcgcggtcgg caagaacggc aagatcgagg ccctggagtg cgcgcgcatc
      241 gactgggcca aaggtgccga cggccgcatg gccatggtgg aagtcgaggg cagccggttc
      301 gagctcaagg ccgacctggt gctgctcgca atgggcttcc tgggaccgcg ccagcccggt
      361 atggtcgagc aggcgggcgt ggcgctcgat gtgcgcggta acgtcgcggc caacgtgaac
      421 gattacagga ccagcgtgcc caagctgttc gccgccggcg acatgcggcg cggccagtcg
      481 ctggtcgtgt gggcgatccg cgagggtcgc cagtgcgcgc gctcgatcga cgagagcctg
      541 atggggtcga cgaccctgcc gcgctgattc tctaccggga ccattccccc gggcgacgat
      601 ttcgtacttt gctttacgac aacacggccg ggccagcgtg acggctacgg cgaaagggca
      661 gtcatggcaa ccgacaagaa gaagaacgcc gacacgaaga gtcccgaaaa gaagaacaac
      721 gacaagaaga tcctggcgtt tgtcgagcga tgcgacaatg cgggggacct cgagtcgctc
      781 atcaagaacg ccaccaggct cggcaatgcg gcggtcgccg aggcggcttt caggaagcgg
      841 atttccctcg tcccggccga acgccccggg tcggtggagc acgatttttg gcagatggtc
      901 caggcattcg agcacgccct ttcggaagag cgaggcaaga ccacgcgatt gtcccgtaca
      961 cgacagaagg ccgcgaaagt cggtgtggtg cagacgctcc gcgactgggc cgcaaatagt
     1021 caggaaacct cgggtttcag aatgctgctg gaacgcggca tgccggagtt caccggcgaa
     1081 gccatcacct tgcgccatcc cgacctgttc gaaccgccgg tcctcgaggc ggcgcaacag
     1141 cggctccggg tggcgggcgt cgacttgacg tcgttgcgat aggcgcaagc tcacggcatc
     1201 gaggcttcaa gcagcgcgag gccgagcgcc gacacgcgaa tgtgagtacg acgacacggt
     1261 catacacgcg gaacgggctt cccgaacgca ggagttcgcg caagaattgt tccaacttga
     1321 acgcgcggag ccggccgacc cttgggatac cgccgcggca ttggggtatc aatgaagctg
     1381 ctgctgatcc agggcgccaa tatggagtat ctcggccgcc gccagcctga gctctatgga
     1441 acgaccaccg ccaaggaact ggacgccata ctgcgccgac aggcgcgccg cctcgatgtg
     1501 acgctggaca tcctctacac caataccgaa ggcgaggcgg tcacggcgat ctacaaggcc
     1561 gaccgcgcca atatcgacgg catcctgttc aatcccgcgg gcttcctgca tgcgggccat
     1621 gcgctgcgcg attgcttgaa gtcgatccgc gcgccggcca tcgaaatcca catgacgaac
     1681 atcgagaagc gcggttatgg ttcggtcacc tcggaagctg cggtcggcat gatcgcgggc
     1741 ttcggcgttg attcctacgt cctcgcgctc gaggccatgg tatctcggtt gcgcaaactc
     1801 gccggaggct aacggagcgg atcatgagca aacgacgcgg cggctgcctg tgcggtgcgg
     1861 tgcgttacga gttcacgggc aagccgcggc tgggggtgtc gtgcttttgc cgcgactgcc
     1921 aatatgtttc gggcggagcg ccggcccacg cgatgattgt ggcgcgtcag gatctcatgg
     1981 tgacaggggc aaccaagacc tattggacgg aggccgagtc cggccggcgg gtggcgcgcg
     2041 agttctgcgc gatctgcggc acgcccctgt tcgcctacac cgagaagaag cccggccggg
     2101 tggcattgac ggtgggcagc ctcgacgatc cgtcggactt caagccgcag ctcgcgatct
     2161 ggatgtcgtc ggcccagcct tggcatacgc tcgacatcag cctgccgcgc tttcagcgcc
     2221 tgccgcgggt gggcaagtac atcatcggtg aagtcctggt cgcgggcttg atcaagctcg
     2281 cgcgcatcat ccgaccggac gccgcgcgcg gataggtcgt atgacggccg ccgactggcc
     2341 cgagctgccg ttcgccgcct gggccgacac ctgcaacacg cttcatctgt ggacccaggt
     2401 ggtcggcaag atccggctcg cccatgcacc gatgatcaat cactggtggc aggtgccgct
     2461 ttatgtcggc agccgcggac tctcgacctc gcccatcccc tacggcggcg agagcttcca
     2521 gatcgatttc gatttcatcg accaccggct ggaaatccgc accagccggg gcgagatcga
     2581 cggcttcgcg ctcgggccgc gaagcgttgc cgatttccac cgtgagatca tggcccgcct
     2641 cagtggcctc gggctgcaga ccaggatctg gaccatgccg gtcgagatcg agggcgccat
     2701 ccccttcgag cgcgacagcg accaccgttc ctacgatgcg gcctacgtcc accggttctg
     2761 gcgcattctc ctgcaggtca atcgtct
//
LOCUS       DASWGA010000131         9711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_645333, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000131 DASWGA010000000
VERSION     DASWGA010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9711
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_645333"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..749)
                     /locus_tag="VF991_03200"
     CDS             complement(<1..749)
                     /locus_tag="VF991_03200"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555474.1"
                     /translation="MVEARTAIVTGGAGGIGKATVRRLLDMGLSVFIVDVDEKSLDSI
                     LSEFGTVSGRLAGCRADVTNEPQVMQAVSRAAERFGNIYALVHVAGGAGPKRARDIED
                     FQLREWAHVIDLNLTSAFLAARAVVPLMRKQRRGRIVLFSSIIADGEKGPLTTVTGRL
                     PYATAKAALLGFTSQLAKDLAECGITVNALMPGLILGEQGTRIRDKFDNLSSDQRAAM
                     LNGYPGGRPGTGDNVAAAVAFLLSESSGFISG"
     gene            880..1632
                     /locus_tag="VF991_03205"
     CDS             880..1632
                     /locus_tag="VF991_03205"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555475.1"
                     /translation="MAGKVALVTGAAAGIGRAIALRLAEEGASVVIVDIDADGLAETA
                     RQIKADGGTAQAITADVTEEAPVKALFAAALNAHGRLDILVNDVGGGTSGHIWEAKVE
                     DWDFIMRLNLRSAFLCTREAAAHMRERRSGRIVNLSSGAREGTPWTAYYIGNAAYAAA
                     KAAIHGFTRHAALELAEYGVAVNAVAPGPIETERTGPGFRKIEHLEYGPIRATPLRRI
                     GVPADIANAVLYLASDEANYITGTTLAVAGGR"
     gene            1635..2528
                     /locus_tag="VF991_03210"
     CDS             1635..2528
                     /locus_tag="VF991_03210"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9555476.1"
                     /translation="MDTSTELANVLDRDIAALKAKAADYGARHHVVEKCTWPQGTRIA
                     VNFTADFDAMLLRRVLNEPPMQLAKGEFGGRVGIWRLIELFDSHAIKATIFTPGRICE
                     LYPQAVKAASKSGHEIADHMWEHQVPKDPALEREHLRRAKDAIEKLTGHRPVGTRSWH
                     TRQLLLDEGYIYNSHDTPDHRPHYISEPDGSKPLLNVPFHYAIDDAMFFSFAWLNTEN
                     DAQRMMDPEHVEEIWWAAFLQQYQQGGYLNICMHPFVSGRALRIAMLDRLIERMKRLP
                     GVWFPTCEQVARHVLSVHPAH"
     gene            2544..3482
                     /locus_tag="VF991_03215"
     CDS             2544..3482
                     /locus_tag="VF991_03215"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9555477.1"
                     /translation="MPWKDRYTISDEKSLLDSEVTWPDGNRCCFRIVVDLAPPCGPAG
                     ITPQDLTTPDAYFGMHGGLAALGDVLRRRGLKATFAVPAVMAEIHTDTIRALRDAGHE
                     IAAHGFKHEDVSLLSRDEERARLERTTEILTRVAGQRPSGWFSLPRPSDKFAGGALSG
                     HTVDLLIEDGYDYFGNGLADDVPHYWVTNFASRRAILTLPYYYHFDDQFFLLFPKKGT
                     GLENPDTLFRNWKAELDAQYKRGRQFAMVLHPHGIGWPNRLHMLEQFSDHAKSLPALW
                     NATSAECARHWTATFPAATHLKLEPSIWCDYPDSLS"
     gene            3389..5053
                     /locus_tag="VF991_03220"
     CDS             3389..5053
                     /locus_tag="VF991_03220"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9555478.1"
                     /translation="MRAALDGDLPGGHAPQTGAIDLVRLSGQPELTEEGPALERKTDV
                     TDSSPSPASLAALRDAVLKGREPPPLQAIARLASYRWFVVGTVCIGAFMGQVDASLAQ
                     MLLPRLEVDFAAPLRTVSWVAVAYILAMASFMPIFGRLADMIGRKLLYTCGFLLFVLG
                     SGLCGFAPDLPVLIAFRILQAIGAALITANSIAIIVLATRPQERGRGLGLQSAAQAIG
                     LGVGPALGGLVLDTLGWNWAFWINVPFGLVGATLGWFVIPQTRGLQGSGRFDWRGALL
                     IAPALTAVVAVLNEGHAWGVTSPALIGCVVLAIVFLTLFVRAERRAETPLIDFALLRQ
                     RAFLYGNVANFMSYAMLFGVFFLIPFVLVRVYQDSALAAGLRLSIIPVMLGVLAPVGG
                     ALYDRFGARAVTTSGVLVCIAGLVGLYVYLDGAPANLPFVMLALAAFGIGQGLFISPN
                     SSAIMATSPAELTGEAGSFLNVVRYLGISTGIAGASALLALRLVAATGLDGGTMAAPA
                     PALVAASRDVVILLCGFGVLAGALSLMRTAPRKARGADEGEQVGAL"
     gene            5170..5868
                     /locus_tag="VF991_03225"
     CDS             5170..5868
                     /locus_tag="VF991_03225"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9555479.1"
                     /translation="MQLSDIIPWGRDLDEYRAMFALSEQDLHKHILGCGDGPASFNAE
                     ATALGVHVISVDPIYEYSASDIESRVVATFETVMSQARAQADRYCWDRFANPDVLGVA
                     RLEAMRRFIADYERGKHANRYIAGSLPHLPFRDASFDLGLCSHLLFLYSDHLSFDQHV
                     AAARELLRVAGDVRFFPLLTLSGVVSPHLLPLSDILRREGHAVDEIRVDYEFMRGGNA
                     MLRIRRHPSLSSAI"
     gene            5881..7593
                     /locus_tag="VF991_03230"
     CDS             5881..7593
                     /locus_tag="VF991_03230"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9555480.1"
                     /translation="MTVLEDRASGAEQRLPTYQVLVDDIKALGVEQVFGLMSDDTAVF
                     ATALDSSGIRFYGARHENNAIAMAEGFSYATDGLGVAVIGRGPATANGLHAATYASRA
                     GSRVLIIFGDAAASTGAVNSMGPDYKGFNSTGVLGAAGLRTFVATSPETARGALADAA
                     AAALQGGAAALLLPVNVQLADMDLAKAAAPMAPKPPRPPAAPRPQAIEAAAALVRQSR
                     KPLIVAGLGAHRAGAKAELEQLADRIGALLVTSARGKDMFRGHPCNLGIVGSFSHSAA
                     RRMIDQADCVLVFGAGLNILTMSFGHSLPKVPLIQVDSDRGHIGRWHPADVAVVGDAR
                     LAAQALLEALPPGSNADRPFRSEETLGFLRDFDIARDFEPANTPRTVDPRALGVALEK
                     LLPAKRNLVYDAGNFLGIVPYLSVPGPGHFKLTSDFASIGLGFGTALGVAKARPDETT
                     VLVIGDGGFLMTMGELETVVREDLPLVVVLMNDCAYGAELHFLKMRDLPVAKSVFPDV
                     DYAPIAEAFGFQAATIRSLDDLHKLAPLLARPDGPLFLDCKLNAAVAAPFMSEIHEFE
                     TRKH"
     gene            complement(7833..8726)
                     /locus_tag="VF991_03235"
     CDS             complement(7833..8726)
                     /locus_tag="VF991_03235"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9555481.1"
                     /translation="MAPSQRRLSAILHADVTGFVRMMEDDEDLTVRHLKSAQTEIWRP
                     AIEMAGGTLVDNAGDSLLAEFGSALAAVAAAIDIQARMAHFNAKLDEEQRLMLRIGVH
                     LGEVIVDEESGHIFGDGVNLAARIQGLAESGGIAVSRAVRDVIESQVEYAFVDGGEHR
                     AKNVSRRLHIYHVRARDGASKQVTASVAPQTTLRFHGTDLAGRKFGFELAFDRLVKSK
                     EGFVIGRDVDQCEAVLSHPTVSRRHARLVIAANTLQIEDLGSTNGTSVDGAVVNAGAR
                     RPLQAGARLRIGDIELFVRYG"
     gene            9055..>9711
                     /locus_tag="VF991_03240"
     CDS             9055..>9711
                     /locus_tag="VF991_03240"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX9555482.1"
                     /translation="MTPRDLFRLHSFFGALTDDETRELLKRALTKRIAAGEVVFRKDD
                     PGDGLYGVLAGSILIVVESLEGKELILNMHGPGEFFGEIALLDGDGRSAAAVAREASQ
                     LFFLGRTEFLAFLNQRPEAMIRIIALLCTRLRRATNLVEDSTFLNVSSRLAKQLTALI
                     DGNGPRDATNSAATLRISQNELAGMLGVSREFVSKQLAIWRKAGIVELGRRRLTVRDE
                     R"
BASE COUNT         1573 a         3257 c         3135 g         1746 t
ORIGIN      
        1 cccgagatga agccggacga ttcggagaga aggaacgcaa ccgcggcggc gacattgtcg
       61 ccggttccgg gtcttccgcc gggatagccg ttcagcatcg ccgcccgctg gtcggatgaa
      121 agattgtcga acttgtcgcg aatccgcgtg ccttgctcgc cgaggatcaa tcccggcatc
      181 agcgcattca cggtgatccc gcactccgcc agatccttgg caagctgcga ggtgaagccg
      241 agcagcgccg ccttcgccgt cgcgtagggc agccggccgg tgaccgtcgt cagcggccct
      301 ttttcgccgt cggcgatgat cgaggaaaac aacacgatcc ggccgcgacg ctgcttgcgc
      361 atcagcggaa ccactgcccg cgcggcgagg aaggcgctgg tcaggttgag atcgatgaca
      421 tgtgcccact cgcgcagctg gaaatcttcg atgtcgcggg cgcgcttggg tcccgctccg
      481 cccgcgacgt gcaccagagc gtaaatgttg ccgaatcgct cggcggcgcg actgacggcc
      541 tgcatcacct gcggctcgtt ggtcacgtcg gcgcggcagc cagccaggcg accggacacc
      601 gtgccgaatt ccgacaggat actgtcgagg gacttctcgt cgacgtcgac gatgaagacc
      661 gacaggccca tgtccagcag ccgcctgacg gttgccttgc cgatgccgcc ggcgccgccc
      721 gttacgatcg ccgtacgcgc ttccaccatg cggtctgcca tccgtctttc tatactgatc
      781 gaggagccgc aggcttaacc tgccagtcca ccgctggcga ggaatcaaac ggaggagcag
      841 gtggcggaac gtgcaagcgc cccggggaga ggagggcggg tggccggcaa ggtcgccctg
      901 gtgaccggcg cggcggcagg gatcggtcgc gcgatcgcgc tgcggctggc cgaggaaggc
      961 gcctcggtcg tcatcgtcga catcgatgca gatggcctcg ccgagacggc gcggcagatc
     1021 aaggcggatg gcgggacggc ccaggcgatc acggcggacg tgaccgagga ggcgccggtg
     1081 aaggcgctgt ttgcggcggc gctgaacgcg catggccggc tcgacatcct ggtgaacgac
     1141 gtgggcggcg ggacttccgg ccatatctgg gaggccaagg tcgaggactg ggatttcatc
     1201 atgcgcctca acctgcgctc ggccttcttg tgcacgcgcg aggcggcggc gcacatgcgc
     1261 gagcgccggt cgggccggat cgtcaatttg agctcgggtg cgcgcgaggg cacgccgtgg
     1321 accgcctact acatcggcaa tgcggcctac gcggcggcga aggccgcgat ccacggcttt
     1381 acgcgccacg ccgcgctcga gcttgccgag tatggcgtgg ccgtgaacgc cgtggcgccg
     1441 ggcccgatcg agaccgagcg gaccgggccc ggcttccgca agattgagca tctcgaatac
     1501 gggccgatcc gcgccacgcc gctgcgccgc atcggcgtgc cggccgacat cgcgaacgcc
     1561 gtgctctatc ttgcttccga cgaggccaac tacatcaccg gcacgacgct tgccgtcgcg
     1621 ggaggacgct agccatggat acctcgaccg aactcgccaa cgtgctggat cgcgacatcg
     1681 cggcgctcaa ggccaaagcc gccgactacg gcgcgcgcca tcatgtcgtc gaaaaatgca
     1741 cctggcccca agggacccgc atcgcggtga acttcaccgc ggatttcgac gccatgctgc
     1801 tcaggcgcgt gctgaacgag ccgcccatgc agctcgccaa gggcgagttc ggcgggcggg
     1861 tcggcatctg gcgcctgatc gagctgttcg acagccacgc catcaaggcg acgatcttca
     1921 cccccggccg catctgcgaa ctctatccgc aggcggtgaa ggcggcgtcc aagagcgggc
     1981 acgagatcgc cgatcacatg tgggagcatc aggtgcccaa ggatcccgcg ctggagcgcg
     2041 aacacctgcg ccgggcgaag gacgcgatcg agaagctgac cgggcaccgg ccggtcggca
     2101 ctagaagctg gcacacgcgc cagctcctgc tcgatgaagg atacatctac aattcccacg
     2161 acacgcccga tcatcgcccg cactacatca gcgagcccga cggttctaag ccgctgctca
     2221 acgtgccctt ccactatgcc atcgacgacg cgatgttctt cagcttcgcc tggctcaaca
     2281 ccgagaacga cgcgcagcgc atgatggatc ccgagcacgt cgaggagatc tggtgggcgg
     2341 ccttcctgca gcagtaccag cagggcggct acctcaacat ctgcatgcat cccttcgtgt
     2401 cgggccgggc gctgcgcatc gccatgctcg atcgcttgat cgagcgcatg aaacgcctgc
     2461 ccggtgtgtg gttcccgacc tgcgagcagg tggcgcgcca cgtcctcagc gttcatccgg
     2521 cccattgacc ttggaggatc gatatgccgt ggaaggaccg ctacacgatc agcgacgaga
     2581 agagcctgtt ggactccgag gtgacctggc cggacggaaa tcgctgctgc ttccgtatcg
     2641 tcgtcgacct cgccccgccc tgcggtcccg cgggcatcac gcctcaggac ctcaccacgc
     2701 cggacgccta tttcggcatg catggcgggc tggcggcgct cggcgacgtg ctgcggcgcc
     2761 gcggcctcaa ggcgaccttc gcggtgccgg ccgtgatggc cgaaatccat accgacacga
     2821 tccgcgcgtt gcgtgacgcg ggccacgaga tcgctgcgca cggcttcaag cacgaggatg
     2881 tgagcctgct cagccgcgac gaggagcgcg cgcggctcga gcgcacgacg gagatcctga
     2941 ccagggtcgc ggggcagcgc ccgtcaggct ggttctcgct gccgcggccc tctgacaagt
     3001 tcgccggcgg cgccctgagc ggccacacgg tcgatctttt gatcgaggac ggctacgact
     3061 atttcggcaa cggcctggcc gacgacgtgc cgcattactg ggtgacgaat ttcgccagcc
     3121 gccgcgcgat cctgaccttg ccctactact atcacttcga cgaccagttc ttcctgctct
     3181 ttcccaagaa gggcaccggc ctggaaaatc ccgacacgct gttccgcaac tggaaggccg
     3241 agctcgacgc gcaatacaag cgcgggcggc agttcgccat ggtgctgcat ccccacggca
     3301 tcggctggcc caaccggctg cacatgctgg agcagttttc agaccatgcc aaaagcctgc
     3361 cggcgctgtg gaatgccacg agcgccgaat gcgcgcggca ctggacggcg accttcccgg
     3421 cggccacgca cctcaaactg gagccatcga tctggtgcga ctatccggac agcctgagct
     3481 gacggaagag gggccggcac ttgaacgaaa gaccgacgtg acggattcat cgccgagccc
     3541 ggcctcgctc gccgcgctcc gcgatgccgt gctcaaagga cgcgaaccgc cgccgctgca
     3601 agccattgcg cggctcgctt cgtatcgctg gttcgtcgtc ggcacggtgt gcatcggcgc
     3661 cttcatgggc caggtcgatg ccagcctggc gcagatgctg ctgccgaggc tcgaggtcga
     3721 ctttgccgcc ccgctcagga ccgtgagctg ggtagcggtc gcctacatcc tggcaatggc
     3781 gtcgttcatg ccgatcttcg gccggctcgc cgacatgatt ggccgcaagc tcctgtacac
     3841 gtgcggcttc ctcctgttcg tcctgggctc gggcctctgc ggcttcgccc cggatcttcc
     3901 ggtgctgatc gccttccgta tcctgcaggc gatcggcgct gcgctgataa cggcgaacag
     3961 catcgccatc atcgtcctcg ccacgcgacc gcaagaacgc gggcgtggcc tcggcctgca
     4021 atcggcggcg caggcgatcg ggctgggcgt ggggccggca ctgggcggcc tggtgctgga
     4081 tacgctcggc tggaattggg cgttctggat caacgttccg tttggcctgg tcggcgccac
     4141 cctcggctgg ttcgtcatcc cgcaaaccag gggtttgcag ggcagcggtc gcttcgactg
     4201 gcggggcgcg ctcctgatcg cgcccgcgct caccgccgtc gtcgccgtgc tgaacgaagg
     4261 ccacgcctgg ggtgtgacgt cgccggcatt gatcggctgc gtggtgctgg cgatcgtctt
     4321 tctgaccctg ttcgtccgcg ccgagcgacg ggccgagaca ccgctgatcg actttgcgct
     4381 cttgcggcag cgcgcctttt tatatggcaa cgtcgcgaac ttcatgtcgt atgcgatgct
     4441 gtttggggtg ttttttctca tccccttcgt cctggtccgc gtctaccagg acagcgccct
     4501 cgcggccggc ctgcggctgt cgatcatccc ggtgatgctc ggagtgctgg cgcccgtcgg
     4561 cggagcgctt tacgaccggt tcggcgcccg tgcggtgacc acttcgggcg tgctcgtctg
     4621 catcgcgggt cttgtcgggc tctatgtcta tctggacggc gcgccggcca acctgccctt
     4681 cgtgatgctg gcgctggcgg cattcggcat tggccagggt cttttcatct cgccgaacag
     4741 cagcgcgatc atggccacgt cacccgcgga gctgaccggc gaggccggca gcttcctgaa
     4801 cgtcgtgcgt tatctcggca tcagcacggg aatcgcgggc gcgtcggcgc tgctggcgct
     4861 ccggctggtc gcggcaacgg ggctcgacgg cggcacgatg gcggccccgg cgccggcgct
     4921 cgtcgccgcc agccgtgacg tggtcatatt gctctgcggc ttcggcgtcc tggccggcgc
     4981 gctgtcgctg atgcgaaccg cgccccgcaa agcccgcggt gcggacgagg gcgaacaagt
     5041 gggcgcgcta tgacggcgtc tccacctttc aggcggcacg caccttgggc ttgagccgtt
     5101 gatctggcgc ccctatcccg gcaacctgag ctgacgcctg aggccgcggc tcttcagacg
     5161 gagagcgcca tgcagttgtc tgacatcatt ccctggggcc gtgacctcga cgagtacagg
     5221 gccatgttcg ccctgtccga gcaggatttg cacaaacata tcctgggttg cggcgacggc
     5281 ccggctagct ttaacgccga agcgacggcc ctgggcgtcc atgtcatttc ggtcgatccg
     5341 atctacgaat attctgcgtc cgacatagaa agtcgcgtcg ttgcgacgtt cgagaccgtg
     5401 atgtcgcagg cgcgggcgca ggccgaccgg tactgttggg accgctttgc aaatcccgat
     5461 gtccttggcg tggctcgcct ggaggcgatg aggcgattca tcgccgatta cgagcgaggc
     5521 aagcacgcca accgctacat cgccggctcg cttcctcact tgccgttccg tgacgccagc
     5581 tttgacctcg gcttatgctc tcacctgctg tttctttatt cggatcactt gtcgttcgat
     5641 cagcacgtcg ctgccgcgcg cgagttgctc cgcgtagcgg gggacgtgcg cttttttccg
     5701 ctgcttacct tgtcgggcgt cgtgtcacct catttgttgc cattgtccga catcctgcgg
     5761 cgcgaaggcc atgccgtcga cgaaatacgc gttgactatg agttcatgcg aggcggcaat
     5821 gccatgctgc gaattcgccg ccatccttcc ctttcgtctg caatttgatg gagcgtagca
     5881 atgaccgtgc tcgaagatcg cgccagcgga gcggaacagc ggttgccgac ctaccaagtg
     5941 ctcgtcgacg acatcaaggc gctcggcgta gaacaggtgt tcggcctgat gagcgacgac
     6001 accgcggtct tcgccaccgc gctcgacagt tccggcatcc gcttctacgg cgccaggcac
     6061 gagaacaacg ccatcgccat ggccgaaggc ttctcctatg ccacggatgg tctcggcgtg
     6121 gcggtgatcg gacgcggacc cgcgaccgcg aacggcctgc acgccgccac ctatgccagc
     6181 cgcgccggct cacgcgtgct gatcatcttc ggcgatgcgg cggcctcgac gggcgccgtc
     6241 aattcaatgg gcccggacta caagggcttc aattccaccg gcgtgctggg cgccgccggc
     6301 cttcgcacct tcgtcgcgac cagtcccgaa accgcccgcg gcgcgctggc ggacgccgcc
     6361 gctgcggcgc tgcaaggcgg cgcggcggcc ttgctgctgc cggtcaacgt ccagctcgcc
     6421 gacatggatc tcgccaaggc cgccgcgccc atggcgccga aaccgccccg gccgccggcg
     6481 gcgccgcggc cgcaggcgat cgaagcggcg gctgccctgg tgcggcagag ccgcaaaccc
     6541 ttgatcgtcg cgggcctcgg cgcccatcgc gccggcgcca aggcggagct tgagcagctc
     6601 gccgatcgca tcggcgccct gctggtcacc tcggcgcgcg gcaaggacat gttccgcggc
     6661 catccctgca atctcgggat cgtcggttcg ttctcgcatt ccgccgcccg gcgcatgatc
     6721 gaccaggcgg attgcgtgct ggtgttcggc gccgggctca atatcctcac catgagcttc
     6781 ggccattcgc tgcccaaggt gccgctgatc caggtcgatt ccgatcgcgg ccatatcggc
     6841 cgctggcatc ccgccgacgt tgccgtggtg ggcgatgcgc ggctggcggc gcaggctctg
     6901 ctcgaggcgc tgccgcccgg ctccaacgcc gaccgtccgt tccgctccga ggagacgctt
     6961 ggcttcctgc gtgacttcga tatcgcccgg gacttcgagc cggccaacac gccgcgcacc
     7021 gtcgatcctc gcgcgctcgg cgtggcgctc gagaagctcc tgccggccaa gcgcaacctg
     7081 gtctacgacg ccggaaactt tttgggcatc gtgccctatc tctccgtgcc gggtccgggc
     7141 cacttcaagc tgaccagcga tttcgcctcg atcggcctgg gcttcggcac ggcgctgggc
     7201 gtggccaagg cgcggcccga cgagaccacc gttttggtca tcggcgacgg cggcttcctg
     7261 atgaccatgg gcgagctgga aacggtggtg cgcgaggatc tgccgctggt cgtcgtattg
     7321 atgaacgact gcgcctatgg cgccgagctg cacttcctca agatgcgcga cctgccggtg
     7381 gcgaagtcgg tgttccccga cgtcgactac gcgccgatcg ccgaggcctt cggcttccag
     7441 gcggcgacca tccgcagcct cgacgacctg cacaagctgg cgccgctctt ggcccggccc
     7501 gacgggccgc tcttcctcga ctgcaagctc aacgccgccg tcgccgcgcc cttcatgagc
     7561 gagatccacg agttcgagac aaggaaacac taagcgcgtt ctgacgcgtc ggcgggcaga
     7621 aaggacaatg acgcgcgacc gggattcgtc tcgaccgcgc gcgttgtcct gggctgtggg
     7681 caagcgagtc gcgtcggaat tgtggcctaa acaattgctg gcctcgacgg gtgctggcgg
     7741 gcgctttgcg aactacttca cacagcgggc acgaccgttt caaagggtga cagcgcggcg
     7801 ggtctttgga tcgaaatcat ataaagcgag ttctagccgt accggacaaa aagttcgatg
     7861 tctccgatcc tgagcctggc gccggcctga agcggccgcc gtgcgccggc attcacgacc
     7921 gcgccgtcga ccgacgtgcc gttggtcgat cccaggtcct cgatttgcaa agtgttcgcg
     7981 gcgatgacca gccgcgcatg gcgccgcgat accgtcggat gcgacaaaac cgcctcgcac
     8041 tggtcgacat cgcggccgat gacgaagcct tccttgcttt tcaccagcct gtcgaatgcc
     8101 agttcgaagc cgaatttgcg acccgccagg tcggtaccgt ggaatcgcag cgtcgtctgc
     8161 ggtgcgactg atgccgtgac ctgcttcgag gcaccgtccc gggcgcgcac atggtaaata
     8221 tgaaggcgcc ggctcacgtt cttggcccgg tgctcgccgc catcgacgaa ggcgtactcg
     8281 acttgcgact caatgacgtc ccgcaccgcg cgcgagaccg caatgcctcc cgattcggcc
     8341 aggccctgaa tgcgggcggc gaggttcacg ccatcgccga agatgtgccc gctctcctcg
     8401 tccacgatga cctcgccgag atgcaccccg atgcggagca tcagtcgctg ctcctcgtcc
     8461 agcttcgcat tgaagtgcgc catgcgcgcc tggatatcga tcgccgccgc gaccgcggcg
     8521 agggccgagc cgaattcggc cagcaaggaa tcgcccgcgt tgtcgaccag cgtgccgccg
     8581 gccatttcga tggccggccg ccaaatctcg gtttgtgccg atttgagatg cctgacggtg
     8641 aggtcctcgt cgtcctccat catgcgaacg aaaccggtga cgtcggcatg aaggatcgcg
     8701 gaaagacgac gttgagacgg tgccattgcg ataccgcggt caggttggcg gaaaagcttt
     8761 cattgactta aagttaccca gctcacgtga gcgccagtgt gcactggcgg gctggcgccg
     8821 ccggctccct cgacatcggg cacccagccc tccttccccc taagggcgac tcgaaggata
     8881 actcagctgg tcgcgcgccg tccatgctgg cgccgctttc tgggttgcgg cgtcgatttg
     8941 aatttcccgt agcattcccg acaggacttc agacatcgcg ccacgtctcc acacaggcta
     9001 gaggcacgat tctagggtgg cgaacttcgg cgcgccgcgt gacatgatgc cagaatgaca
     9061 ccccgggatc tgtttcgcct gcattctttt ttcggcgccc tgacggacga cgaaacacgg
     9121 gagctgctga aacgtgcgct caccaaacgc attgcggctg gtgaggtcgt gtttcgcaag
     9181 gacgacccgg gtgatggcct ctatggcgtg ttggcgggaa gcatcctgat tgtcgtcgag
     9241 tcgctggagg gtaaggaact gattctcaat atgcatggcc ctggcgagtt cttcggcgag
     9301 attgccctgt tggacggcga cgggcgtagt gcagcggctg tagcccgcga ggcgtcacaa
     9361 ctgttctttc ttggccgcac tgaattcctg gccttcctca atcaacggcc cgaggccatg
     9421 attcgcatca tcgccttgct gtgcacccgc ctgcggcgcg ccacgaacct ggtcgaggat
     9481 tccacctttc tgaacgtttc cagccgactg gccaaacagc tgaccgcctt gatcgacggc
     9541 aacggaccgc gagacgccac caactccgcc gcgaccctgc gtatctcaca gaatgaactg
     9601 gctggcatgc tgggcgtctc gcgtgagttt gtaagcaaac aactggccat ctggcgaaag
     9661 gcaggcattg tcgaactggg gcgccgccgc ttgaccgtcc gcgacgaacg c
//
LOCUS       DASWGA010000132         3186 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1280751, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000132 DASWGA010000000
VERSION     DASWGA010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280751"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VF991_03245"
     CDS             <1..196
                     /locus_tag="VF991_03245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555483.1"
                     /translation="DWVQVRQRLGSVPAVKNVAVRNLESDRAELRLEYFGTTDELQRT
                     LALAGLTLDKDADKWRLQAR"
     gene            220..1302
                     /locus_tag="VF991_03250"
     CDS             220..1302
                     /locus_tag="VF991_03250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX9555484.1"
                     /translation="MTGTASATRWRFWAAAAVVFVLILWLLNDILLPFVVGMAVAYFL
                     DPVVVRLQRLGLSRAWATTAVTILAVLIAVGVAMAVLPPLFAQLQSLVVNAPQYMVQA
                     ATRVQPLIEPLREKLGLPTLSLQDLQADATQWAGQALAVVGSVAGGLARRGVALINLL
                     ALVFLTPVVTFYLLRDWEKVIAALDGALPLDNAPTIRKLARESNAAIAGYVRGQALVC
                     ISLVTIYAVGLSLVGLQFGLVIGLIAGAISFIPFVGTFVGAVMALGMALAQFPPDWMS
                     VIKVAVVFLFGQMMEGNVLSPKLVGDRVGLHPVWIMFALLAGGSLFGFVGILIAVPTA
                     AVIGVVVRHLLGRYRESGIYRGGTPA"
     gene            1310..2017
                     /locus_tag="VF991_03255"
     CDS             1310..2017
                     /locus_tag="VF991_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HEX9555485.1"
                     /translation="MANQLTFDLALPPPTYAREDFIVAPGNREALAWIDRWPDWPAPA
                     LALGGPAGCGKTHLGTIWAARAGARVLDGGALEGNSIADLSDLAAASPAIMIDNAERA
                     PELALFHLYNLMRERRGHLLLISTALPAHWSIALPDLASRLRAAPAVALAPPDDELLG
                     SIILKQLADRQLHAGAGVVHYLVSHMERSADSARRIVAALDRRALAERREIDRRLAAD
                     VLAELSGTVDNERGGGK"
     gene            2014..2475
                     /locus_tag="VF991_03260"
     CDS             2014..2475
                     /locus_tag="VF991_03260"
                     /inference="COORDINATES: protein motif:HMM:NF021438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HEX9555486.1"
                     /translation="MRKLIVAALFGALASMAFAQQSSVMGTWLTASGAAQIRIGPCPD
                     PANGPICGVIVSLTNPKGPDGVVLASEAATDYHNTDPALRGRKLLGMPLIWGFKATAD
                     PKVFEGGQIYNASNGKTYNANITLQPDGRLSLRGYVGSPMFGETQIWTRIN"
     gene            2487..>3186
                     /locus_tag="VF991_03265"
     CDS             2487..>3186
                     /locus_tag="VF991_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555487.1"
                     /translation="MDMGIKGRKAIVCAASKGLGKGCAMALAQEGVDLVINARTKAEL
                     EATAEEIRKKTGVKVTAVAVDVTTDAGRKQVLAACPEPDIIVNNAGGPPPGDFREWSR
                     DDWIKAIDANMLTPIEFIKASVDGMMKRGFGRIVNITSSSVKAPIDILGLSNGARSGL
                     TGFVADVARVSVRHGVTINGLLPGPFDTDRLRGTYKTRAAKSGKSYEEEYKAGAKLNP
                     AGRFGTPQEFGAACA"
BASE COUNT          480 a         1078 c         1095 g          533 t
ORIGIN      
        1 cgactgggta caggtgcgcc agcggctggg ctcggtgccg gcggtcaaga acgtggcggt
       61 ccgcaacctc gaatccgatc gcgccgagtt gcgcctggaa tatttcggca cgaccgacga
      121 gctgcaacgt acgctggcgc tggccggcct gacgctcgac aaggacgccg acaagtggcg
      181 attgcaggcg cggtgatcgc gcggcgtggg ggctgaggca tgaccgggac cgcttcggcc
      241 acgcgctggc gcttctgggc ggcggcggcg gtcgtcttcg ttctgattct gtggctgctg
      301 aacgatatcc tgctgccgtt cgtcgtcggc atggccgtcg cctattttct cgatcccgtc
      361 gttgtgcgcc tgcagcgtct cggcctgtcg cgcgcctggg cgacgacggc ggtcacgatc
      421 ctggccgtgc tgatcgccgt cggcgtcgcc atggcggtcc tgccgccgct gttcgcccag
      481 ctccagtcgc tggtcgtcaa cgcgccgcaa tacatggtgc aggccgcgac gcgggtgcag
      541 cccttgatcg aaccgctgcg tgagaagctc ggcctgccga cgctcagcct gcaggacctg
      601 caggccgacg ccacgcaatg ggccggacag gcgctcgccg tcgtcggcag cgtggccggt
      661 gggctggcgc gccgcggcgt tgctctcatc aacctgctcg ccctggtgtt cctgacgccg
      721 gtcgtgacgt tctatctgct gcgcgattgg gagaaggtga tcgccgccct cgacggcgcc
      781 ctgccgctcg acaacgcgcc gacgatccgc aagctcgccc gcgaatcgaa cgccgccatc
      841 gcgggctacg tgcgcggcca ggcgctggtc tgcatttcgc tggtcacgat ctatgccgtc
      901 ggcctgtcgc tggtcggcct gcagttcggc ttggtcatcg gcctgatcgc cggcgccata
      961 tccttcatcc ccttcgtcgg caccttcgtc ggcgccgtca tggcgctcgg catggcgctg
     1021 gcgcagttcc cgcccgactg gatgagcgtc atcaaggtcg cggtcgtttt cctgttcggc
     1081 cagatgatgg aaggcaacgt cctctcgccc aagctggtcg gcgaccgcgt cggcctgcat
     1141 ccggtgtgga tcatgttcgc cctgctggcg ggcgggtcgc tgttcggctt cgtcggcatc
     1201 ctgatcgcgg tgccgacggc ggcggtgatc ggcgtcgtcg tgcgccatct gctcggccgc
     1261 taccgcgaaa gcggcatcta tcgcggcggc acgccggcct gaggcggcga tggccaacca
     1321 gctcacgttc gacctggcgc tgccgccccc gacctatgcg cgcgaggatt tcatcgtggc
     1381 gccgggcaat cgcgaggcct tggcctggat cgatcgctgg ccggactggc cggcgccggc
     1441 gctcgccctg ggcggaccgg cgggctgcgg caagacccat ctcggcacca tctgggcggc
     1501 gcgcgccggc gcccgcgtgc tcgacggcgg tgcgctcgaa ggcaacagca tcgccgattt
     1561 gtcggacctc gccgccgcat cgcccgcgat catgatcgac aatgccgagc gtgcgccgga
     1621 gcttgccttg ttccacctct acaatctgat gcgcgagcgg cgcggccatc tgctgctgat
     1681 ctcgaccgcc ttgccggcgc actggtcgat cgccttgccc gacctcgcgt cgcggctgcg
     1741 cgcggcgccg gccgtcgccc tggcgccgcc cgacgacgaa cttctgggct cgatcatcct
     1801 gaaacagctc gccgaccggc aattgcacgc cggcgcgggg gtcgtgcact atctggtgtc
     1861 gcacatggag cgttccgccg attcggcacg acgcatcgtc gccgccctcg atcgccgggc
     1921 gctggccgaa cggcgcgaga tcgatcgccg cctggcggcc gatgttttgg ccgagttgtc
     1981 cggaactgtt gacaacgaaa gagggggagg gaagtgagaa aattgattgt cgcggcgctg
     2041 ttcggggcgc tcgcatcgat ggcctttgcg cagcagtcgt cggtgatggg cacctggctt
     2101 acggcctcgg gcgcggcgca gatacgcatc ggtccatgtc ccgacccggc gaacgggccg
     2161 atctgcggcg tcatcgtcag cctgaccaac cccaagggac cggacggggt cgtgctcgcg
     2221 tccgaggcgg cgaccgacta ccacaatacc gatccggcgc tgcgcggccg caagctgttg
     2281 ggcatgcccc tgatatgggg tttcaaggca accgccgatc ccaaggtgtt cgaaggcgga
     2341 caaatctaca acgcctcgaa cggcaagacc tacaatgcga atatcaccct gcaacccgac
     2401 ggcaggctga gcctgcgcgg ctatgtcggc tcgccgatgt tcggcgaaac gcagatctgg
     2461 acacggataa attagggagt gtggcgatgg acatgggcat caagggccgc aaggcgatcg
     2521 tctgtgcggc gagcaaggga ctgggcaagg gctgcgccat ggcattggcc caggaaggcg
     2581 tcgatctcgt gatcaacgcg cgcaccaagg ccgagctcga ggcgacggcg gaggagatcc
     2641 gcaagaagac cggcgtgaag gtgacggccg tcgccgtcga tgtcacgacc gacgccggcc
     2701 gcaagcaggt gctcgccgcc tgtccggagc ccgacatcat cgtcaacaac gccggcggac
     2761 cgccgcccgg cgatttccgc gagtggagcc gcgacgactg gatcaaggcg atcgacgcca
     2821 acatgctgac gcccatcgag ttcatcaagg cgtcggtcga cggcatgatg aagcgcggct
     2881 tcggtcgcat cgtgaacatc acgtcgagct cggtgaaagc gccgatcgac atcctgggct
     2941 tgagcaacgg cgcgcgaagc ggcctgaccg gcttcgtggc cgacgtcgcc cgcgtctccg
     3001 tgcgccacgg cgtcaccatc aacggcctgc tgcccggccc gttcgacacc gaccggctgc
     3061 gcggcaccta caagacgcgg gccgccaaga gcggcaagag ctacgaagag gagtacaagg
     3121 cgggcgccaa gctcaacccg gccggccgct tcggcacgcc gcaggagttc ggtgcggcct
     3181 gcgcgt
//
LOCUS       DASWGA010000133         2691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_902487, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000133 DASWGA010000000
VERSION     DASWGA010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_902487"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..737
                     /locus_tag="VF991_03270"
     CDS             <1..737
                     /locus_tag="VF991_03270"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the uridylylation or deuridylylation of
                     the PII nitrogen regulatory protein; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein"
                     /protein_id="HEX9555488.1"
                     /translation="FARGYAPYWLSFPTETLVRQAELVRRAERDRQPLAIEHRIDGER
                     SVTEVTIYTLDTHGLFARLAGAMAISGANIVDAKIFTLANGMALDTFWIQDLEGKPFD
                     GPQRLARLAARVELSLSNRLDIQRELDSQRSSWPKRDRVFTVEPRVLIDNNASDTFTV
                     IEVNGRDRPGFLHVVTRALTRLNLQIASAHITTYGERAVDVFYVKDLFGLKVVHPDKL
                     KQIADTVERSIRDFDTRFEPLAKAAE"
     gene            complement(827..1114)
                     /locus_tag="VF991_03275"
     CDS             complement(827..1114)
                     /locus_tag="VF991_03275"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEX9555489.1"
                     /translation="MARQPVVYILASPNGRALYIGVTTDLGRRLEEHRLGMSIHTAQY
                     NITRLVYIESHETAPDAIEREKQLKRWRREKKIALIDAANPEWLDLSSEVL"
     gene            complement(1196..2161)
                     /locus_tag="VF991_03280"
     CDS             complement(1196..2161)
                     /locus_tag="VF991_03280"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9555490.1"
                     /translation="MIKRRTLLGAAGASLLAAPALGQAYPSKPLKMVVPYPPGGGTDG
                     LGRIAAERLSEKLGQPIVVQNIGGASGTVGSETVRRADPDGYTILFNASLFVLGKTIL
                     PTCPYDPQTDFRAIAQAGEAPLVLLVNLNVPGTDYASTMAAIAKEPKKYFFALSSGGS
                     AGHIATLAFLKRTGLPLDTILYKGTAPANADLLSGNVQLFMDPWTVTLPLATSGKARG
                     LFVTSKERTKLAPDIPTSAEVGLKDFNIASWYGVWAPKGTPDAVVDKLASAMADVSKD
                     PAFLATTTGLGIVPTARGPAAFAAFIKSEVETNTALLKDAGYKPE"
     gene            complement(2158..2580)
                     /locus_tag="VF991_03285"
     CDS             complement(2158..2580)
                     /locus_tag="VF991_03285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555491.1"
                     /translation="MVTKTVRRLAVAVGLVLAASTGHAANGISVTRGADSTVYGNCVP
                     SLVVENKSAETIDYLQVDVVMALDNGQERTVELKSAYREGVLYPIAPGGKATLKQHLD
                     TSLAIGAGCADVKARRVVRTLCEAAGGKKCASAVSVQP"
BASE COUNT          450 a          912 c          858 g          471 t
ORIGIN      
        1 acttcgcgcg cggctacgcg ccctattggc tctccttccc gaccgagacg ctggtccgcc
       61 aggccgagct ggtgcgccgc gctgagcgcg accgccagcc gctcgccatc gagcatcgca
      121 tcgacggcga gcgctcggtc accgaggtca cgatctacac gctggacacc cacggcctgt
      181 tcgcgcggct ggccggcgcc atggcgatca gcggcgccaa catcgtcgac gccaagatct
      241 tcaccctggc caacggcatg gcgctcgaca cgttctggat ccaggacctc gagggcaagc
      301 cgttcgacgg cccgcagcgg ctggcccgcc tcgccgcccg ggtcgagctc tcgctctcca
      361 accgcctcga catccagcgc gagctcgaca gccagcgttc gtcgtggccc aagcgcgatc
      421 gcgtcttcac cgtcgagccc cgcgtgctga tcgacaacaa cgcgtccgac actttcacgg
      481 tgatcgaggt caacggccgc gaccggccgg gcttcctgca cgtcgtcacg cgcgcgctga
      541 cccggctcaa cctgcagatc gcctcggccc acatcaccac ctacggcgaa cgcgccgtcg
      601 acgtctttta cgtaaaagac ctgttcggtt tgaaggtggt ccaccccgac aagctcaagc
      661 agatcgccga caccgtcgag cgctcgatcc gcgacttcga cacccgcttc gagccgctgg
      721 ccaaggcggc ggagtaacgt ccccgtcgtc tcgaccgagg cgcgaagcgc cgagcggaga
      781 gaccttgtct caacaattag ccgcagtgcg ttgcagattc ccgttgctac aagacctcgc
      841 tagaaagatc gagccactcg ggattcgccg catcaatcaa cgcgatcttc ttctcccgtc
      901 gccatctctt gagctgtttc tcgcgttcga tcgcatcagg cgcggtctcg tgtgattcga
      961 tatagacaag ccgcgtgatg ttgtactggg cagtgtgaat cgacatgcct aggcgatgct
     1021 cttcgagtcg acggcctagg tcggtcgtga ctccaatgta caaggcgcgg ccgtttggac
     1081 tcgcgagaat ataaacgaca ggctgtcgtg ccatggtgcc tgatattgaa gggaccttcg
     1141 cgcgatcacg caaggtctct ccacgcgcgc cttcggcgct tggtcgagac gacggctact
     1201 ccggcttgta gcccgcatcc ttcagcagcg cggtattggt ctcgacctcg ctcttgatga
     1261 aggcggcgaa ggccgcgggc ccgcgcgcgg tcggcacgat gccgagcccg gtggtcgtgg
     1321 cgaggaaggc ggggtccttg gagacgtcgg ccatcgccga cgcgagcttg tcgacgacgg
     1381 catcgggcgt gcccttgggt gcccatacgc cgtaccacga ggcgatgttg aagtccttca
     1441 gcccgacttc ggccgaggtc gggatgtcgg gcgcgagctt ggtgcgctcc ttggaggtga
     1501 cgaacagccc gcgcgccttg cccgaggtgg cgagcggcag cgtcaccgtc catgggtcca
     1561 tgaagagctg cacgttgccg ctcaatagat cggcattcgc tggcgccgtg cccttgtaaa
     1621 ggatggtgtc gagcggcagg cctgtgcgct tcaggaaggc gagcgtggcg atgtggccgg
     1681 ccgagccgcc cgacgacagc gcgaagaaat acttcttcgg ctccttggcg atcgccgcca
     1741 tggtgctggc atagtcggtg cccggcacgt tgagattgac cagcaggacc agcggcgcct
     1801 cgccggcctg ggcgatcgcc cggaagtcgg tttgcgggtc gtagggacag gtcggcagga
     1861 tggtcttgcc cagcacgaac aggctggcat tgaacaggat ggtgtagccg tccggatcgg
     1921 cgcggcgcac cgtctcggaa cctacggtgc ccgaggcgcc gccgatgttc tggacgacga
     1981 tcggctggcc gagcttttcc gacagccgct cggcggcgat gcgccccagc ccgtcggtgc
     2041 cgccgccggg cggatagggc accaccatct tcagcggctt gctagggtac gcctgaccca
     2101 gcgccggcgc cgccagcagc gaggcgcccg cggcgcctaa aagtgtccgc cttttgatca
     2161 cggctggacc gacaccgccg acgcgcattt cttgccgccg gcggcttcgc aaagcgtgcg
     2221 cacgacgcgg cgcgccttga cgtcggcgca gccggcgccg atcgccagcg atgtatcgag
     2281 atgctgtttc aaggtcgcct tccctcccgg cgcaatcgga taaagcacac cctcgcggta
     2341 ggccgacttc aactcgacgg tgcgttcctg gccgttgtcg agggccatca cgacatcgac
     2401 ctgcaggtaa tcgatggtct ccgccgattt gttctcgacc accaggctcg gcacgcagtt
     2461 gccgtagacc gtggagtccg cgccgcgcgt gacgctgatg ccattggcgg catgtccagt
     2521 cgaagcagca agaaccagac caacggcgac ggcaagacga cggacggtct tcgtaaccat
     2581 gtccacctcc accgattgaa ctatcccgtc tgcaggcgct gctcgcgccg caccgtcagc
     2641 atctgcagga tcgacgcggc ggtctcctcg atcgaccggc gcgtgacatc g
//
LOCUS       DASWGA010000134         2882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_146244, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000134 DASWGA010000000
VERSION     DASWGA010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146244"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..761
                     /locus_tag="VF991_03290"
     CDS             <1..761
                     /locus_tag="VF991_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9555492.1"
                     /translation="IVAQAFGTMGAMFPGRVVLGVGTGEGLNEVPSTGQPWPEFKERF
                     ARLREAVTLIRALWTQERVSFEGQYYKTEKATIYDRPEAPVPIYVAAAGALVARYAGR
                     SAEGFICTSGKKPELYTETLLPKVAEGIAASEDPSRSYDRMIEVKVSFDTDKVRALED
                     TRHWAALALTPEEKITVEDPVEMQRLADALPLERAASRWIVSSDADEHVERIGYYVGL
                     GFRNLVFHAPGPDQARFLKLYGEHVLPRLRKRFG"
     gene            779..1552
                     /gene="cofE"
                     /locus_tag="VF991_03295"
     CDS             779..1552
                     /gene="cofE"
                     /locus_tag="VF991_03295"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043773 - coenzyme F420-0 gamma-glutamyl
                     ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HEX9555493.1"
                     /translation="MKRSNAVEMIAVPGIPLVRKGDDLVALIGEGLARGGIVPRGGDV
                     FVLTQKIVSKAEGRMVDLATVEPSAEAIELAGKIQKDPRIVELILSESVRVVRARPGI
                     LIVEHRLGFVMANAGIDQSNVASPDDPQRALLLPVDPDGSAATLRKRLSLRFGVSVAV
                     IISDSFGRAWRRGTCGVAIGAAGLPSLMDLRGSPDLFGRELQVSITGHADEIAAAASL
                     VMGQGAEGQPVVVMRGLTWYGPDNAASELVRPAAEDMFR"
     gene            1567..2499
                     /gene="cofD"
                     /locus_tag="VF991_03300"
     CDS             1567..2499
                     /gene="cofD"
                     /locus_tag="VF991_03300"
                     /EC_number="2.7.8.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043743 - LPPG:FO 2-phospho-L-lactate
                     transferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate transferase"
                     /protein_id="HEX9555494.1"
                     /translation="MALSGGVGGAKLALGLSLVLPAEELLVVANTGDDFEHLGLSISP
                     DIDTLTYTLAGIDNPATGWGRRDETWSFMDSIGALGGEDWFRLGDRDLALHVERTRRL
                     RLGQTLSEVTADICRRLGIGARVVPMSDDRVRTRVRGDAGWIDFQDYFVRQQCRPIVH
                     ELAFDGVTLARPHVDITAALRSGDVRAVIVCPSNPFISVEPILAIPGMRDAIKASGAP
                     VVAVSPIIGGQAVKGPTAKMMRELGLEASAAGVAARYGDLLDGYIVDHADADGIGHVG
                     ARVTIARTLMRSLHDRETLARATLNAADALALQR"
     gene            2496..>2882
                     /locus_tag="VF991_03305"
     CDS             2496..>2882
                     /locus_tag="VF991_03305"
                     /inference="COORDINATES: protein motif:HMM:NF014085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate guanylyltransferase"
                     /protein_id="HEX9555495.1"
                     /translation="MSDIWAVIPVKEFNGAKHRLSGLLSPPERRLLAETMLTDMLNAV
                     AGCRLLAGVMIVTLDPHATALGEKIGARIVTEGARDGHTGSVNAGRRLLAGEGRGGMV
                     TMPGDIPATRAGEIDAVLSAHLAAPSF"
BASE COUNT          461 a          935 c         1000 g          486 t
ORIGIN      
        1 ccatcgtcgc ccaggcgttc ggcacgatgg gcgcgatgtt cccgggacgc gtcgtgctcg
       61 gcgtcggaac cggtgaagga ctcaacgaag tgccttcgac cggccagcct tggccggaat
      121 tcaaggagcg cttcgcgcgc ctgcgtgagg ccgtcacgct gattcgggca ctctggaccc
      181 aggagcgggt cagcttcgaa ggccagtact acaagaccga gaaggcgacg atctacgacc
      241 gcccagaggc gccggtgccg atctatgtcg ccgccgcggg tgccctcgtg gcgcgttacg
      301 ccggccgctc cgccgagggg ttcatctgca caagcggcaa gaagccggag ctctacaccg
      361 agaccctgtt gccgaaggtc gccgagggca tcgcggcgtc ggaggatccg tcgcggtcct
      421 acgatcgcat gatcgaggtt aaggtgtcgt tcgacaccga caaggtgcga gcgctcgagg
      481 acacgcgcca ctgggcggcg ctggcgctga cgcccgagga aaagataacg gtagaggatc
      541 ccgtggagat gcagcgcctc gccgacgcgc tgccgctgga gcgcgccgcc agtcgatgga
      601 tcgtgtccag cgacgccgac gagcacgtcg agcggatcgg ttactatgtc ggtctcggtt
      661 tccggaacct ggtgttccac gcgccgggac cagaccaggc gcgcttcctg aaactctacg
      721 gtgagcacgt gctgccgcgg ctgcgcaagc gtttcggttg agtgggcagg acaggccgat
      781 gaagcgcagc aacgccgttg agatgatcgc cgtccccggc attccgctgg tgcgcaaggg
      841 cgacgatctc gtcgccttga tcggcgaggg gttggcgcgc ggtggtatcg tgccacgtgg
      901 cggcgacgtc ttcgtgctga cgcagaagat cgtgtccaag gccgaagggc gcatggtcga
      961 tctcgcgacc gtcgaaccct ccgccgaagc gatcgaactc gccggcaaaa tccagaaaga
     1021 tccgcgcatc gtcgaattga tcctgtcgga atcggtgcgc gtcgtgcggg caaggccggg
     1081 catcctgatc gtcgagcacc ggctgggctt cgtgatggcc aatgcgggca tcgaccagtc
     1141 caacgtggcc tcgcccgatg acccccagcg agcactgcta ctgccggtcg atcccgacgg
     1201 cagcgcggcg acattgagga agcgcctgtc gctaaggttc ggcgtgtcag tggcggtgat
     1261 cattagcgac agcttcggcc gtgcctggcg gcgcggtacc tgcggcgttg cgatcggtgc
     1321 cgccggcctc ccgtcgctga tggatctgcg tggctcgccc gatctgttcg gccgcgagct
     1381 ccaggtcagc atcaccgggc atgcggacga gatcgctgct gcagcgtcgc tcgtgatggg
     1441 gcagggtgcc gaaggccagc ctgtcgtcgt catgcgcggt ctgacatggt acggtcccga
     1501 caatgccgcg tccgagctgg tgcgcccggc cgccgaggac atgttccgat gagcaaacga
     1561 cttgtcgtgg cgctgtccgg cggggtcggc ggcgccaaac tggcgctcgg tctgagcctc
     1621 gtcttgccgg ccgaagaact gctcgtggtc gccaacaccg gcgacgattt cgagcatctt
     1681 ggactgagca tctcgcccga tatcgacacg ctgacctaca ctctcgcggg catcgacaat
     1741 cccgccaccg gctggggccg gcgtgacgag acgtggtcgt tcatggacag catcggcgcg
     1801 ctcggcggcg aggactggtt tcggctcggc gatcgcgatc tcgcgctgca tgtcgagcgc
     1861 acccgtcgcc tgcgcttggg gcagacactg tccgaggtga ccgccgacat ttgccggcgc
     1921 ctcggcatcg gtgcccgcgt ggtgccgatg agcgacgacc gcgtgcgtac ccgcgtgcgc
     1981 ggcgacgcgg gctggatcga cttccaggat tacttcgtgc gccagcagtg tcggccgatt
     2041 gtccatgagc tggctttcga cggcgtgacg ctcgcccggc cgcacgtcga catcacagcg
     2101 gcgctgcgct cgggcgacgt gcgggccgtg atcgtctgtc cgtccaatcc cttcatcagc
     2161 gtcgagccga tcctggcgat ccccggcatg cgcgatgcga tcaaggcaag tggcgcaccg
     2221 gtcgtcgcgg tgtcgccaat catcggcggg caggccgtca agggcccgac cgcgaagatg
     2281 atgcgcgaac ttggcctcga ggccagtgcc gccggcgtcg ccgcacgcta cggcgacctg
     2341 ctcgatggct atatcgtcga ccacgccgac gccgatggga tcggccatgt cggcgcgcgg
     2401 gtcacgatcg ctagaaccct gatgaggagc ctgcatgacc gggagacgct ggcgcgcgcg
     2461 acgctcaacg cggcggacgc actggccttg cagcgatgag cgacatctgg gcggtcattc
     2521 cggtcaagga gttcaatggc gccaagcatc gcctgtcggg tctgctgtcg ccgccagaac
     2581 gccgtcttct cgccgagacc atgctgacgg acatgctcaa cgccgttgcc ggttgccggc
     2641 ttctggccgg cgtgatgatc gtcacgctcg atccgcatgc gacggctctt ggcgaaaaga
     2701 tcggtgcgcg gatcgtgacc gagggcgcgc gggacggaca taccggcagc gtgaacgccg
     2761 gccgacgcct tctcgcgggc gaagggcgtg gcggcatggt cacgatgccc ggcgacattc
     2821 cagccacccg cgccggcgaa atagacgcgg tgttatcggc gcatctcgca gcgccctctt
     2881 tc
//
LOCUS       DASWGA010000135         9201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1281756, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000135 DASWGA010000000
VERSION     DASWGA010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9201
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1281756"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="VF991_03310"
     CDS             <1..390
                     /locus_tag="VF991_03310"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9555496.1"
                     /translation="DVSEEWTGIARRYWKEAGLESRIELTIGPALATLDGFLAIGLEG
                     QLDLAFIDANKEDYDAYYERCLKLVRPGGLILVDNVLWGGSVANLADKDADTEAIRAL
                     NAKLKADERIELALFAVGDGMTCALKR"
     gene            424..876
                     /locus_tag="VF991_03315"
     CDS             424..876
                     /locus_tag="VF991_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018899030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol-disulfide oxidoreductase DCC family
                     protein"
                     /protein_id="HEX9555497.1"
                     /translation="MAHDAFSYRSDPAVPAFPDDRPILVFDGHCVLCSSFAQFILRTD
                     RHRRFRLMAAQTPLGAALYRHFGLDPTEYETNILIEDGRAWFKSEGSIRIFERLGWPW
                     SLVSIARLLPRPVRDWLYDIVARNRLRWFGARQTCFLPDRSQADRFIG"
     gene            873..2561
                     /locus_tag="VF991_03320"
     CDS             873..2561
                     /locus_tag="VF991_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018329424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4166 domain-containing protein"
                     /protein_id="HEX9555498.1"
                     /translation="MSDGLSVLILGGYGTFGGRIVELLENEPRLTLIVAGRSRERAEA
                     YCKARNEAKARLVPTVVDRSGDLAAQLAPLRPDILVDASGPFQTYGQDPYRVVSACIA
                     HGINYLDLADGSDFVEGVHAFDELARAAGVYVLSGVSSFPVLTAAVVRRLCRDMARVD
                     AIRAGIAPSPYAGVGGNVIRAIASYAGQRTPLRRQGKAAVGHPFTEHVRFTIAPPGHL
                     PLRTTMFSLVDVPDLRALAHLWPEASDIWMGAGPVPEVLHRALVALAWLVRLRLVSSL
                     LPLAPLMHFASNRLCWGEHRGGMFVEVEGRAASGKPIKRSWHLLAEGDDGPLIPSMAV
                     EALVRKALDRRIPSPGARAASRDLELDDYEELFARRTIYTGVREGALDASPLYARLLG
                     SAWHGLPPEIRDMHHVGGTASAQGRASVERGTGLLARLAASIVGFPKAVEDTPVSVRF
                     DVSDAQETWTRRFGHESFSSRQFAGRGRSERLLCERFGPLVFAMALVADGPRLRLVLR
                     RWSAFGMALPMWLCPRSQSSETVADGRFRFHVEIDHPITGLIVRYRGWLDAPKR"
     gene            complement(2558..3100)
                     /locus_tag="VF991_03325"
     CDS             complement(2558..3100)
                     /locus_tag="VF991_03325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HEX9555499.1"
                     /translation="MSLTKSGGTLYSMAMAIIASRTRPGSSKIGRRLLLGAPLGLAAG
                     AALAQDEIKFKRSSLVVETAAREIKFDVELALNDVERSRGLMFRDKLGPYEGMLFDFH
                     QEAPVGFWMKNTLIPLDMVFIGGDGTVRHVHANAVPLSTDTIPSQFPVRAVLEINGGS
                     ARLLGIKPGDKVKHPIFGNA"
     gene            complement(3125..3643)
                     /locus_tag="VF991_03330"
     CDS             complement(3125..3643)
                     /locus_tag="VF991_03330"
                     /inference="COORDINATES: protein motif:HMM:NF012534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX9555500.1"
                     /translation="MTTQQGETGGDVGTVELRGKVKWFNAVKGYGFLALDSDNSDAFL
                     HVTTLRQSGHEDLKPGATVVCAGVRGPKGWQVMKVIDVDSSTAVAIAPKTPPVPDGIA
                     MGDYITALVKWYNNERGYGFVTREATEGDIFVHAAVLRRHGMESLAPGQKVMIRIAEG
                     QKGLQVIEIRAA"
     gene            3764..4642
                     /locus_tag="VF991_03335"
     CDS             3764..4642
                     /locus_tag="VF991_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555501.1"
                     /translation="MFRSDLFKGKRFLVTGGGTGLGRIMVERFVELGADCVICGRRGG
                     VLEETAQQVMAKHPGRRVDVHAVDIRVATAVEEMIERIWQAGPLDGLVNNAAGNFISQ
                     TKDLSPRAFDAIANIVLHGTFYTTNACGKRWIADQRKASVLSILTTWVWTGSPFVVPS
                     AMSKAGVAVMTQSLAVEWGRHGIRLNAIAPGPFPTEGAWARLNPLQEGNDGRYNARNP
                     MGRVGRPSELANMAAFLMSDEVEYINGEVIAIDGAMGIMGNGTFANMMAYTDDDWRRI
                     REQIQSANAADKAKRS"
     gene            complement(4639..5745)
                     /locus_tag="VF991_03340"
     CDS             complement(4639..5745)
                     /locus_tag="VF991_03340"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX9555502.1"
                     /translation="MDDQSVAQRVLDHIANGTTDIGQEVWREPVANYRSQERLAAEIE
                     RILRRSPVPFCPSAALPEAGSYVAREAAGTPLVVVRGSDGKVRAFRNACRHRGMQVAS
                     GAGCARAFVCRYHGWTYNLEGRLRHIPHEEGFPGFDKQAHPLVPVTASERFGLVFVTQ
                     DEPTLDDDSLGGLAKLIAPDQRLFATAEREFEVNWKILLEGFIEGYHIKSTHPQSFLP
                     YGFDNLNVIDLFGRHSRVTYPFQRIKKLAKVPPHERRVEGLLTYVYQLFPNVLITVLS
                     RHTNVVILEPVSIDRTRQITYTLTNGGGDDPEALAEAKRDAEFVGTTGAAEDRAVVQA
                     IQRGLGSGANDAFTFGYFESAIVHFHKTLTAALA"
     gene            6062..6691
                     /locus_tag="VF991_03345"
     CDS             6062..6691
                     /locus_tag="VF991_03345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555503.1"
                     /translation="MQFGAKPISFPTVPCLPRRRLLPLCVLAASGLSGGLLGRIGEAS
                     AQAVEVRHWQGAAAATRQPEHVVAGTIAEWRSLWSRVGVAPPEAFEPGRMNAVGIFLG
                     RRSGEGYSVNILSASRRRDRIVVVFEERMPADIMMAQRVSPGPAPRAVSSAPPAFSAG
                     GAAGFAPPGTMATVAPPPARPTGPPTSPWAIVLINRADLPISVEQRLFR"
     gene            complement(6711..8507)
                     /locus_tag="VF991_03350"
     CDS             complement(6711..8507)
                     /locus_tag="VF991_03350"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IlvD/Edd family dehydratase"
                     /protein_id="HEX9555504.1"
                     /translation="MASKKGSNGKRRLRSRDWFDAPGDPTMAALYLERYMNFGLTLAE
                     LHSGRPIIGIAQTGSDLAPCNRHHIELAARVRDGIRDAGGIPMEFPVHPIQETGKRPT
                     AALDRNLAYLSLVECLYGYFFDGVVLTTGCDKTTPAMIMGACTVDIPAIVLSGGPMLD
                     GHFAGGLAGSGTIVWYARQELAAGRIDLQKFLEMVASSAPSVGHCNTMGTALSMNSMA
                     EALGLSLTGCAAIPGPYRERGQIAYETGKRIVDMVWEDLKPSDILTRKAFENAIVAAS
                     ALGASTNCPPHINAIARHIGVKLGNADWDRIGYDIPLLVNCMPAGKYLGEAFHRAGGV
                     PTVMRELLAKKKIHGDALTVTGKTMAQNVKDAQPADGEVIKTYDKPMLGQAGFAVLSG
                     NLFESAIMKTSVISPEFRKKYLERPGDKDAFEGTAIVFEGPEDYHHRINDPKLPIDEN
                     SILFIRNTGPVGYPGAAEVVNMLPPDRLVKGGILLLPCIGDGRQSGTSASPSILNASP
                     EAAVGGGLALLKTGDKVRIDIGKRRADILISDKELAERKAAWKPHVKESQTPWQELQR
                     KFVGQLASGACLDFAVNYQRIAETKGVPRHSH"
     gene            complement(8600..>9201)
                     /locus_tag="VF991_03355"
     CDS             complement(8600..>9201)
                     /locus_tag="VF991_03355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9555505.1"
                     /translation="GGEMGDFVHSLHEEHGVVFHLEDTASAIDGKRVKLKSGGTLEAD
                     LVVVGVGVRPRLELAERAGLAVDRGLIVDAYLATKAPEIFAAGDIARWPDPHTGQAIR
                     VEHWVVAERQGQAAALNMLGLREKFEAVPFFWSQHYDIPINYVGHAEKWDELAIEGDI
                     AGKDCLLRYKLGGRTLAVASIFRDVANLQAELAMEQGSD"
BASE COUNT         1466 a         3093 c         2983 g         1659 t
ORIGIN      
        1 gacgtcagcg aggaatggac gggcatcgcc cgacgctact ggaaggaggc cggcctggag
       61 agccgcatcg aactcaccat cggccctgcc ctggccacgc tcgacgggtt tttggccatc
      121 ggactggaag gccagctcga cctcgccttc atcgacgcca acaaggagga ctacgacgcc
      181 tattacgagc gttgcctgaa gttggtgcgc ccgggtgggc tcatcctggt cgacaatgtg
      241 ctgtggggcg gttcggtcgc caacctcgcc gacaaggacg ccgacaccga ggcgatccgc
      301 gcgctcaacg ccaagctgaa agccgacgag cggatcgagc tggccctgtt cgccgtcggc
      361 gacggcatga cctgcgcgct gaagcgctag ggagtaggcg cggcagattg tagaaaaggt
      421 gccatggcgc atgatgcgtt cagctaccgg agcgatccgg cggtccctgc ctttcccgac
      481 gaccgtccga tcctcgtctt tgacggccat tgcgtgcttt gttcgtcgtt cgcccaattc
      541 attctgcgga ccgatcggca tcgccgtttc cgcctcatgg ccgcgcagac cccgctgggc
      601 gccgccctct acaggcactt cggcctcgat cccacggaat acgagaccaa catcctgatc
      661 gaggacggcc gggcctggtt caaatccgag ggctcgatca ggattttcga gcggcttggc
      721 tggccatggt cgctggtctc gatcgcccgg ctgctgccgc gcccggtgcg cgactggctc
      781 tacgacatcg tcgcccgcaa ccgcttgcgc tggttcgggg cgaggcaaac ctgcttcctg
      841 cccgatcgct ctcaagccga ccggttcatt ggatgagcga cggtctcagc gttctgatcc
      901 tcggcggcta tggcacgttc ggcggccgta tcgtcgaatt gttggagaac gagccacggc
      961 tcaccttgat cgtcgccggc cgctcgcgtg aacgggcgga ggcttattgc aaggcccgga
     1021 acgaagccaa ggccaggctg gtgccgacgg tcgtcgaccg atccggcgac ctcgccgccc
     1081 aattggcgcc gctgcggccc gatatcctcg tcgatgcgag cggccccttc caaacctatg
     1141 gccaggaccc gtaccgcgtc gtcagcgcct gcatagccca cggcataaac tacctcgacc
     1201 tggccgacgg atcggatttc gtcgaaggcg tccatgcctt cgatgagttg gctcgtgcgg
     1261 ccggcgtcta tgtcctgtcc ggcgtttcca gcttccccgt cctgaccgca gcggtggtac
     1321 ggcggctctg tcgcgacatg gcgcgcgtcg atgccatccg ggccggcatc gcgccgtcgc
     1381 cctatgccgg cgtcggcggc aacgtgatcc gcgccatcgc gagctatgcc ggtcagcgca
     1441 cgccgctcag gcgccagggc aaagccgccg tcggccatcc tttcaccgaa cacgtgcgct
     1501 tcaccatcgc tccgcccggc cacctgccgc tgcggaccac gatgttttcc ctggtcgacg
     1561 ttcccgatct gcgcgccctg gcccacctat ggcccgaggc cagcgacatc tggatgggcg
     1621 ctggtccggt tccggaagtg ctgcatcgcg cgctggtcgc tctcgcctgg ctcgtgcgat
     1681 tgaggctggt gtcctcgctg ctgccgctgg cgccgctcat gcatttcgcc tcgaatcgcc
     1741 tgtgctgggg cgagcaccgc ggcggcatgt tcgtcgaagt cgaaggccga gccgcgtcag
     1801 gcaagccgat caagcgctcc tggcatcttc tggccgaagg cgatgacggg ccgctcattc
     1861 cctcgatggc cgtcgaggcc ctggtgcgca aggcgctcga ccggcgcatc ccgtccccgg
     1921 gcgcacgggc ggcgtcgcgc gatctcgaac tcgacgacta cgaggaattg ttcgcccgaa
     1981 ggacgatcta cacgggcgtc agagagggcg cgctcgatgc ttcgcccctg tacgcgcgcc
     2041 tgctgggatc ggcctggcac ggattgccac ctgaaattcg cgacatgcat catgtcggcg
     2101 gcacggcatc cgcgcagggc cgcgccagcg tcgagcgcgg gacgggcctg ctggcgcgtc
     2161 tggccgcttc catcgtcggc tttcccaagg ccgtcgaaga cacgccggtc agtgttcggt
     2221 tcgacgtctc cgacgcacaa gaaacctgga cgcgacgctt cggccatgag tcgttctcga
     2281 gccgccagtt cgccggtcgc ggccgatcgg aacgcctgct ctgcgaacgc ttcggtccgc
     2341 tcgtcttcgc catggcgctc gttgccgatg gccctcggct gcgactcgtc ctgcgccgtt
     2401 ggagcgcgtt cggtatggcc cttccgatgt ggctctgtcc gcgctcgcaa tcatctgaaa
     2461 ccgtcgccga cggccgtttt cgcttccacg tcgagatcga ccatccgatc accggactga
     2521 tcgtgcgcta ccgcggttgg ctggatgcac cgaagcgcta ggcgttgccg aagatcggat
     2581 gcttgacctt gtcgccgggc ttgatgccca aaagcctggc gctaccgccg ttgatctcca
     2641 gcaccgcccg caccgggaac tggctcggga tggtgtcggt cgacagcggc acggcattgg
     2701 catggacgtg gcggaccgtg ccgtcgccgc cgatgaacac catgtcgagc gggatcagcg
     2761 tgttcttcat ccagaagccg accggcgcct cctggtggaa gtcgaacagc atgccctcgt
     2821 agggcccgag cttgtcgcgg aacatcagcc cgcgcgaccg ctcgacgtcg ttcagcgcca
     2881 gctcgacgtc gaacttgatc tcgcgggccg cggtctcgac gaccagggag gagcgcttga
     2941 acttgatctc gtcttgcgcc agagccgcgc ccgccgccag gcctagcgga gcgccgagca
     3001 gcaggcgacg gccgattttc gacgatccgg gccgcgtccg ggaagcgatg attgccatgg
     3061 ccatggaata aagcgtgccg cccgatttgg tcaaactcaa gacgaccggc cgcggcccag
     3121 ccgatcaggc cgcgcggatc tcgatgacct gcaggccctt ctgcccttcg gcgatgcgga
     3181 tcatcacctt ctgaccgggc gccagcgatt ccatgccgtg gcggcgcagc acggcggcgt
     3241 gcacgaagat gtcgccttca gtggcctcgc gcgtgacgaa gccgtagccg cgttcgttgt
     3301 tgtaccattt gaccagcgcg gtgatgtaat cgcccatggc gatgccgtcg ggcaccggcg
     3361 gcgtcttggg ggcgatggcg acggcggtcg aggaatcgac gtcgatcacc ttcatgacct
     3421 gccagccctt gggaccgcgg acaccggcac acaccaccgt cgcgccgggc ttgagatctt
     3481 catgcccgga ctggcggagt gtcgtcacat gcaggaacgc gtcgctattg tcgctgtcga
     3541 gggccaagaa cccataccct ttgacggcgt tgaaccactt gactttacca cgcagctcaa
     3601 cggtaccgac gtccccgccc gtctctccct gttgggtcgt catacaacga tcccatgttg
     3661 ttatgcggaa atcctagcac cccggaaggc cggcgcaaca gtccttgtga ggttcgagcc
     3721 cgtcgcgcta gaccacacag ctaatgcaac aggggagcaa acgatgttcc ggagcgatct
     3781 cttcaagggc aaacgcttcc tcgtcaccgg aggcggcacg gggctgggcc ggatcatggt
     3841 ggagaggttc gtcgagctgg gtgcagactg tgtgatctgc ggtcggcgcg gcggcgtcct
     3901 cgaagaaacc gcccagcagg tgatggccaa gcatcctggc cggcgggtcg acgtccatgc
     3961 cgtcgatatc cgggtggcca cggcggtcga ggagatgatc gaacgcatct ggcaggccgg
     4021 tccgctcgac ggactggtca acaatgccgc cggaaacttc atttcccaga ccaaggatct
     4081 cagcccgcgc gccttcgacg ccatcgccaa catcgtcctg cacgggacct tctacacgac
     4141 caacgcctgc ggcaagcgct ggatcgccga ccagcgcaag gcgagcgttt tgagcatcct
     4201 gacgacctgg gtgtggaccg gcagtccgtt cgtggtgccc tcggcgatgt ccaaggcggg
     4261 cgtcgccgtg atgacccaga gccttgccgt cgaatggggc cgccacggca tccggctgaa
     4321 cgccatcgcg cccggcccct tccccaccga gggcgcctgg gcgcggctca acccgctgca
     4381 ggaaggcaac gacggccgct acaacgcccg caatccgatg ggccgcgtcg gccgccccag
     4441 cgagcttgcc aacatggcgg cgttcctgat gagcgacgaa gtcgagtaca tcaacggcga
     4501 ggtgatcgcc atcgatggcg ccatgggcat catgggcaac ggcaccttcg ccaacatgat
     4561 ggcctacacc gacgacgact ggcggcgcat tcgcgagcag atccagtcgg ccaacgccgc
     4621 cgacaaggcc aagcgttctt aggccaacgc cgccgtcaac gtcttgtgga aatggacgat
     4681 ggcactctcg aagtagccga aggtgaaggc atcgttggcg ccgctgccca agccgcgctg
     4741 gatcgcctgg acgacggcgc gatcctccgc agcgccggtc gtgccgacga actcggcgtc
     4801 gcgcttggct tcggccagcg cctcgggatc gtcgccgccg ccgttggtca gcgtgtaggt
     4861 gatctgccgc gtacgatcga tcgacacggg ctcgaggatc accacgttgg tgtggcgcga
     4921 cagcacggtg atcagcacgt tgggaaacag ctgatagacg taggtcagca ggccctcgac
     4981 gcggcgctcg tgaggcggga ccttggccag cttcttgatg cgctggaacg gataggtgac
     5041 gcggctgtgg cggccgaaca ggtcgatgac gttcagattg tcgaagccgt agggcaggaa
     5101 gctttgggga tgcgtcgact tgatgtgata gccctcgatg aaaccttcga gcaggatctt
     5161 ccagttgacc tcgaactcgc gttctgccgt ggcgaacagg cgctgatcgg gcgcgatcaa
     5221 ctttgccagt ccaccgagcg aatcgtcgtc cagcgtcggt tcgtcctggg tcacgaacac
     5281 caagccgaag cgctcgctcg ccgtcaccgg gaccagcgga tgggcttgct tgtcgaagcc
     5341 cgggaagcct tcctcgtgcg ggatgtggcg cagcctgcct tcgagattgt aggtccagcc
     5401 gtgatagcgg cagacgaagg cgcgcgcgca gcccgcgccg ctcgccacct gcatgccgcg
     5461 atgccggcag gcattgcgga aggcgcggac cttgccgtcg gatccgcgca ccacgaccag
     5521 cggcgtgccg gccgcctcgc gggcgacgta cgaaccagcc tcgggcagcg ccgccgaggg
     5581 acagaacgga accggcgagc gccgcaggat gcgctcgatt tcggcagcca ggcgctcctg
     5641 cgatcgatag ttggcgaccg gctcgcgcca gacttcctgt ccgatgtccg tcgtgccgtt
     5701 ggcgatatgg tcgagcaccc gctgagcgac ggactgatca tccattgccg ctttcatccc
     5761 tgccattgcc ttgcctgcca tccctttcct gccatccgtt ggccgcggtt cggccaagca
     5821 tacgcccgac tgtctcgccg acaaaagaaa ccgaaccccg ctggcgtgaa cgccgttcaa
     5881 cttccttacg agcgaaactt gcacgcctgc ggagtctggc gtgttgcacg aatgcaacat
     5941 ggggcaacga ttgataccgg gaaggcgcga accttgcctg cggcagcctc aattgagcca
     6001 aagtgtagtg gtcattttac agcgcctttt ttcagtcagc ccggatttca gagacccagt
     6061 cgtgcagttc ggcgccaagc caatttcttt tcccacagtt ccctgcctgc cgcgccggcg
     6121 gcttctgcct ctctgcgtcc tcgccgcgag tggcctgtcg ggcgggctcc tgggtaggat
     6181 cggcgaggca tccgcgcaag ccgtcgaagt acgccactgg cagggcgccg ccgccgcgac
     6241 gcgccagccc gagcatgtcg tcgccggaac gatcgccgag tggcgcagcc tgtggagcag
     6301 ggtcggtgtt gccccgcccg aagcttttga gccgggccgc atgaacgccg tcggcatctt
     6361 cctcggacgc cgcagcggcg agggttactc ggtcaacatc ctgtcggcca gccggcggcg
     6421 cgatcgcatc gtcgtggtgt tcgaagagcg catgccggcc gacatcatga tggcgcaacg
     6481 cgtgagcccg ggccccgcgc cgcgcgccgt ttccagcgcg ccccccgcct tcagtgccgg
     6541 tggcgccgca ggcttcgcgc cgcccggcac catggcgacc gtcgctccgc cgccggcgcg
     6601 gccgaccggc ccgccgacct cgccctgggc gatcgtcctg atcaaccgcg ccgacttgcc
     6661 gatctccgtc gaacagcgcc tcttccgata gcaagctccg atagccgtcg tcagtgggag
     6721 tgccgcggca cgcctttggt ctcggcgatc ctctgatagt tcaccgcgaa gtcgaggcac
     6781 gcgccgctcg cgagctggcc cacgaacttg cgctgcagtt cctgccacgg cgtctggctc
     6841 tccttgacgt gcggcttcca cgccgccttg cgctctgcca gctccttatc cgagatcagg
     6901 atgtcggcgc gccgcttgcc gatgtcgatc ctgaccttgt cgccggtctt gagcagcgcc
     6961 agcccgccgc cgaccgctgc ttcgggcgag gcgttgagga tcgacgggct ggccgaggtg
     7021 ccgctttgcc gtccgtcgcc gatgcagggc agcagcagga taccgccttt cacgaggcga
     7081 tcaggcggca gcatgttcac gacctcggca gcgccgggat aaccgacggg cccggtgttg
     7141 cggatgaaca ggatgctgtt ctcgtcgatc ggcagcttgg gatcgttgat gcgatggtga
     7201 tagtcctcgg ggccttcgaa cacgatcgcc gtgccctcga aggcatcctt gtcgcctggg
     7261 cgctccaggt atttcttgcg gaactcgggc gagatcaccg aggtcttcat gatcgccgat
     7321 tcgaaaaggt tgcccgacag gacggcgaag cccgcttggc ccagcatcgg cttgtcgtag
     7381 gtcttgatca cctcgccgtc ggccggctgc gcgtccttga cgttctgcgc catggtcttg
     7441 ccggtgacgg tgagcgcatc gccatggatc ttcttcttgg ccaaaagctc gcgcatcacc
     7501 gtcggcacgc cgccggcgcg atggaacgct tcgccgagat atttgccggc cggcatgcag
     7561 ttcaccagca gcgggatgtc gtagccgatc ctgtcccaat cggcgttgcc gagcttgacg
     7621 ccgatgtgtc gggcaatcgc gttgatgtgc ggcgggcagt tggtcgaggc gccgagcgcg
     7681 cttgccgcca cgatggcgtt ctcgaacgcc ttgcgggtga ggatgtcgga cggcttcagg
     7741 tcctcccaca ccatgtcgac gatgcgcttg ccggtctcgt aggcgatctg tccgcgttcc
     7801 cggtacgggc ccgggatggc ggcgcagccc gtcagcgaca ggccgagcgc ctcggccatg
     7861 ctgttcatcg acagcgccgt gcccatggtg ttgcagtggc cgacgcttgg cgcgctcgag
     7921 gccaccattt cgaggaactt ctgcagatca atgcggcctg ccgccagttc ctggcgggcg
     7981 taccagacga tcgtgcccga gccggcaagg ccgccggcga agtggccgtc gagcatcggt
     8041 ccgcccgaca gcacgatggc cggaatgtcg accgtgcagg cgcccatgat catggccggg
     8101 gtagtcttgt cgcagccggt ggtcagcacg acgccgtcga aaaagtaacc gtagaggcac
     8161 tcgaccaggc tgaggtaggc gagattgcga tcgagcgccg cggtcggccg cttgcccgtc
     8221 tcctggatcg ggtggacggg aaactccatg ggaatgccgc cggcgtcgcg gatgccgtcg
     8281 cgaacgcggg ccgccagctc gatgtgatgg cggttgcagg gcgcgagatc gctgccggtc
     8341 tgggcgatgc cgatgatcgg ccggccgcta tgcagttcgg ccagcgtcag gccgaaattc
     8401 atgtaccgtt cgaggtagag cgccgccatg gtcggatcgc ccggagcgtc gaaccagtcg
     8461 cggctgcgca gccggcgttt gccgttgctg cctttcttgc tggccatcct gtttcctcca
     8521 aatttgtttc gttgagccta caaccggttc attccgcacg caccctgcca tgacagcggg
     8581 gtcgttagcg catcacccgt cagtccgagc cctgctccat cgccagctcg gcctgcaggt
     8641 ttgcgacatc gcggaagatc gaggcgacgg cgagcgtgcg gccgccgagc ttgtagcgta
     8701 gcaggcagtc cttgccggcg atgtcgccct cgatcgccag ttcgtcccat ttctcggcgt
     8761 ggccgacata gttgatcggg atgtcgtagt gctggctcca gaagaacggc actgcctcga
     8821 acttctcgcg cagtcccagc atgttcagcg ccgccgcctg cccctgccgt tcggcgacca
     8881 cccagtgctc gacgcgaatg gcctggccgg tatgcggatc gggccagcgc gcgatgtcac
     8941 cggcggcaaa gatttccggc gccttggtcg cgagataggc gtcgacgatg aggccgcgat
     9001 cgacggcaag ccccgccctc tccgcaagct cgagccgcgg ccgcacgccg acacccacga
     9061 cgaccaaatc cgcttcgagc gtgccgccgc ttttcaattt cacgcgcttg ccgtcgatgg
     9121 cgctcgccgt gtcctcgaga tggaagacga cgccgtgctc ttcatggagg gagtgcacga
     9181 agtcgcccat ctcgccgccg a
//
LOCUS       DASWGA010000136         1838 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2422759, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000136 DASWGA010000000
VERSION     DASWGA010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2422759"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VF991_03360"
     CDS             <1..474
                     /locus_tag="VF991_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX9555506.1"
                     /translation="QSLSRLVPEDIHAVVAYLRSVPPTASSDLPATLAPPPPASHKLG
                     GGASERPGKVVFEGACVSCHGWSGTGEGAITPFAMLAGARAVNDPAGINVAQIVISGT
                     KRHVPEDAISMPAFGGIYSDSEIASVTNYVIARFGGQASRITAQDVAELRKQTAR"
     gene            560..>1838
                     /locus_tag="VF991_03365"
     CDS             560..>1838
                     /locus_tag="VF991_03365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555507.1"
                     /translation="MTYYDLGAYSRAITTKSPEAQVWFDRGLNWVYAFNHEEGIKCFG
                     KALEHDPDCAMAHWGISYAAGPNYNLPWHLYDPAGKAKALAAAYDAMQKALACAARAT
                     PVEQALIHALPVRYPQREPIEDQSAWDKAFTKAMRAVFNAWRDDLDVRTIFTDAIMNE
                     TPWQMWDLGTGGVAKDAGTAEAVEVLESALKDFPAAWNHPGLLHLYVHLMEMSPFPQR
                     ALRAGDRLRELMPDSGHLVHMPTHIDVLCGHYRDVVVYNQKAVVADRKFLEREGPLNI
                     YSMYRNHNYHFVIYGAMFLGQYTPAIEAAQELIDTTPEALLRIPSPPMADFIEGFLPM
                     KQHVLVRFGKWREIIAQELPKDRELYCSTTAMMLYAKGVAHSTLGEIAEAEKARAAFL
                     AAKAAVPESRRVHNNTVHDLLAVAEEMLNGELEY"
BASE COUNT          332 a          616 c          593 g          297 t
ORIGIN      
        1 caaagcctca gccggctggt gccggaggac atccacgccg tggtcgccta tctgcgaagc
       61 gtgccgccga ccgcctcgag cgatctgccg gcgacattgg cgccgccgcc gcccgcgtcg
      121 cacaagctgg gcggcggcgc atcggagcgg cccggcaaag tggtcttcga aggcgcctgc
      181 gtgagctgcc atggctggag cgggaccggc gagggcgcca taacgccgtt cgcgatgctg
      241 gccggcgcgc gggccgtcaa cgatcccgcc ggcatcaatg tcgcccagat cgtgatttcc
      301 ggaaccaagc gccatgtccc ggaggatgcg atctccatgc ctgccttcgg cggcatctac
      361 tccgattccg agatcgcatc cgtcaccaac tacgtcatcg cgcgcttcgg cggccaggcg
      421 tcccggatca ccgcgcagga cgtggcggag ctgagaaagc agacggcccg atagttttct
      481 ggccacgcgc tttgcatcaa tcctcagcca tgcgaaggtt caggcgtccc ctgatgctgc
      541 cgccggtagc gaggatcaca tgacctatta cgatcttggc gcgtatagcc gcgcgatcac
      601 gacgaaatct ccggaagcgc aggtctggtt cgaccgtggc ctgaactggg tctacgcctt
      661 caaccacgag gaaggcatca agtgcttcgg caaagcgctg gagcacgatc cggactgcgc
      721 catggcccat tggggcatct cctacgccgc gggtcccaac tacaatctgc cctggcatct
      781 ctacgaccca gccggaaagg ccaaggcgct cgccgcagcc tacgatgcca tgcagaaagc
      841 gctggcttgt gcggcccggg cgacgccggt cgagcaggcg ttgatccacg ccctgccggt
      901 ccgctatccg caacgcgagc cgatcgagga ccaatcggcg tgggacaagg ccttcaccaa
      961 ggcgatgcgc gcggtgttca acgcctggcg tgacgatctc gacgtccgga cgatcttcac
     1021 cgacgcgatc atgaacgaga cgccgtggca gatgtgggat ctcggcaccg gcggcgtcgc
     1081 caaggatgcc ggcaccgccg aggcggtcga ggtcctcgaa agcgcgctca aggatttccc
     1141 ggccgcgtgg aaccatccgg gcctgctgca tctctacgtt cacctgatgg agatgtcgcc
     1201 gttcccgcag cgcgcgctca gggccggcga ccggctgcgc gagctgatgc ccgattcggg
     1261 gcacctggtc cacatgccga cccatatcga cgtgctgtgc gggcattacc gcgacgtcgt
     1321 ggtctacaac cagaaagccg tcgtcgccga tcggaagttt ctcgagcgcg aagggccgct
     1381 gaacatctat tcgatgtatc gcaaccacaa ctatcacttc gtgatctacg gcgcgatgtt
     1441 cctcggccag tacacgcccg ccatcgaggc ggcgcaggag ctgatcgaca ccacgccgga
     1501 ggcgttgctg cgcattccct cgccgccgat ggccgacttc atcgagggct tcctgccgat
     1561 gaagcagcat gtgctggtgc gcttcggcaa gtggcgcgag atcatcgccc aggagctgcc
     1621 caaggaccgc gagctctact gctcgacgac ggcgatgatg ctctacgcca agggggtggc
     1681 gcactcgacg ctgggcgaaa tcgccgaggc ggagaaggcg agggcggcct tcctcgcggc
     1741 caaggcggcc gtgcccgaga gccgccgcgt gcacaacaac accgtccacg acctgctggc
     1801 cgtcgccgag gagatgctga acggggagct ggaatatc
//
LOCUS       DASWGA010000137         2549 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1282091, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000137 DASWGA010000000
VERSION     DASWGA010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1282091"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /gene="prpE"
                     /locus_tag="VF991_03370"
                     /gene_synonym="yahU"
     CDS             <1..356
                     /gene="prpE"
                     /locus_tag="VF991_03370"
                     /gene_synonym="yahU"
                     /EC_number="6.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008195132.1"
                     /note="catalyzes the formation of propionyl-CoA using
                     propionate as a substrate; PrpE from Ralstonia
                     solanacearum can produce acetyl-, propionyl-, butyryl- and
                     acrylyl-coenzyme A, and Salmonella enterica produces
                     propionyl- and butyryl-coenzyme A; not expressed in
                     Escherichia coli when grown on propionate/minimal media;
                     ATP-dependent; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="propionyl-CoA synthetase"
                     /protein_id="HEX9555508.1"
                     /translation="ASHDDVAECAVIGIADELKGQVPFGFLVLKAGVDRPPQDTVREV
                     VQMVRDRIGPVAFFKAAIVVPRLPKTRSGKILRGTMQKIADGQPWKMPATIDDPAAIE
                     EITGGLKTAGYASKG"
     gene            complement(918..2090)
                     /locus_tag="VF991_03375"
     CDS             complement(918..2090)
                     /locus_tag="VF991_03375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX9555509.1"
                     /translation="MTSSFHIDTPAACLEHATMFVAFELGKAKWEVGIVVPGSGKLSR
                     YVVDGGDIETAWRLICKAGQRAEKQCGGRAMRIVSCYEAGYDGFWLHRWLVERGVESR
                     VLDPASMQVDRRARRAKTDRLDLQRLMGALMRHEWGDPLACKVVHVPSVDQEDNRRPW
                     RERDRLVKERTAHTNRIKGLLHGQGVRDALPRAKGFRAWLAEVRTGDGRGLPAHLMAE
                     LEREHARLLLVQEQIAEIEAQAAAAREATQASAMAAQINQLIDLKSVGPVSSQTLVGE
                     VFFRDFKNRRQVGSYFGLTGTPFNSGSSQREQGISKAGNPRARTAAIELAWLWRRHQP
                     GSALSRWFDARVGDQKGRVRRIAIVALARKLMVALWRFLGHGIVPEGALLRAAPRA"
     gene            complement(2292..>2549)
                     /locus_tag="VF991_03380"
     CDS             complement(2292..>2549)
                     /locus_tag="VF991_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9555510.1"
                     /translation="EGARLRFRPVIMTSFAFILGLLPLVIAAGAGALSRRAVGTPVFG
                     GMIAASLFGIFVIPMLYVVFQRARERTARRIPDVKLQAGGD"
BASE COUNT          417 a          859 c          826 g          447 t
ORIGIN      
        1 tggcctcgca cgacgacgtc gccgagtgcg ccgtgatcgg catcgcggac gagctcaagg
       61 gccaggtgcc gttcggcttc ctggtgctga aggccggcgt cgaccgcccg ccgcaggaca
      121 cggtgcgcga ggtcgtgcag atggtgcgcg accgcatcgg ccctgttgcc ttcttcaagg
      181 ccgccatcgt cgtgccccgc ctgcccaaga cacgctcggg caagatcctg cgcggcacca
      241 tgcagaagat cgccgacggc cagccctgga agatgccggc caccatcgac gacccggccg
      301 cgatcgagga gatcaccggc gggctcaaga cggcggggta tgcgagcaaa ggttaatcgt
      361 tgccgaccct tcgagacggc cgatacgcgg cctcctcagg gtgaggcaat tcgttcacac
      421 gccaacctca tccttatatg ggcgatgatc ggtcaagcgg taatcattgg tagtcatccc
      481 tttgtttgac tgcgatgacc atcccttcgt cccgaccgcc gccgcttggt gcgccgcgcg
      541 cagatgccgt caaggctggc cgcaggcgac cgccgaaggc ggcgcggagc ggccttgacg
      601 gcatgagcac ggcgctaggc tggcgaggtc ggggacagtc gatggcgctg ggtggcaagt
      661 tgtatgacgg tgcgatcttg cggcgacgtt gaacaggttg cagtgggacg ctgggccttt
      721 gtcgtgtgct gcgcgtcggt tcgacggtca tcaccttata ttcggtcgga ctcgaagtcc
      781 gataccctaa ttcctcatac acgctggagg cctggcccag gacacgatga gacccatctg
      841 agagaacggt gtcgattggt ccatggatga ggtcggtcat catccgtccc gctgtaaata
      901 cgtcgcccat actgctttta ggcgcgcggt gcggcacgca ggagcgcgcc ctcgggcacg
      961 atgccgtgcc cgaggaagcg ccacagcgcc accatcagct tgcgcgccag ggcgacgatg
     1021 gcgatgcgcc tgacgcggcc cttttgatcg ccgacgcgtg cgtcgaacca gcggctcagc
     1081 gcactgccgg gctgatggcg tcgccacagc caagccagct cgatggctgc cgtgcgcgct
     1141 ctcgggttgc cggccttgct gatgccttgc tcgcgttggc tggagccact gttgaacggc
     1201 gtgccggtca agccgaagta gctgccgact tggcgccgat tcttgaagtc gcggaagaac
     1261 acctcgccga ccagcgtctg gctgctgacc ggccccacgc tcttgaggtc gatcaattgg
     1321 ttgatctggg cggccatcgc gctggcttgg gttgcctcgc gggccgctgc cgcctgggcc
     1381 tcgatctcgg cgatctgctc ttggaccagc agcagtcggg cgtgctcccg ctcgagctcg
     1441 gccatcagat gggccggcag gccgcggccg tcgccggtgc gtacctcggc aagccaggcg
     1501 cggaagccct tggcccgcgg cagtgcatcg cgcacgccct ggccatgcag caggcccttg
     1561 atgcggttgg tgtgcgccgt gcgctccttg accagccgat cgcgctcgcg ccaggggcgc
     1621 cgattgtcct cctggtcgac cgacggtaca tgcaccacct tgcaggccaa tgggtcaccc
     1681 cactcgtggc gcatcagggc gcccatcagt cgctggagat ccaggcggtc cgtcttggcc
     1741 cgccgcgccc gccggtcgac ttgcatgctg gccggatcga gcacccggct ctcgacccca
     1801 cgctcgacca gccagcggtg caaccagaac ccgtcgtatc ccgcttcgta gcagctcacg
     1861 atccgcatgg cccgaccgcc gcactgcttc tccgcccgct gccctgcctt gcagatcaat
     1921 cgccaggccg tttcgatatc accgccatcc accacgtaac ggctcagctt cccgctaccg
     1981 gggacaacga tgcccacctc ccacttcgcc ttgcccagtt caaaggcgac aaacatcgtg
     2041 gcatgctcca ggcaagcggc gggggtgtcg atgtgaaacg aggacgtcat ctcttcctcc
     2101 gtaggttggt tgtggaaatc caaacctacc tctcgacctc tcgtcgcccc atagaatctg
     2161 aggagcatcg cgaagcgatg cgtctcgaag gatgggccac agcacgtgct cgttgcccac
     2221 ccttcgagac ggccgcttcg cggcctcctc agggtgaggt gattttgtct cggccggaaa
     2281 ggctctagcg atcagtcgcc gccggcttgc agctttacgt ccgggatgcg cctggccgtg
     2341 cgctcgcgcg cccgttggaa gacgacgtac agcatcggga tcacgaaaat gccgaacagg
     2401 gaggcggcga tcatgccgcc gaacaccggc gtgcccaccg cgcggcggct gagggcgccg
     2461 gcacctgcgg caatgaccag gggcagcagg ccgaggatga aggcgaagct cgtcatgatc
     2521 acggggcgga agcgcaatcg cgcgccctc
//
LOCUS       DASWGA010000138         3199 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1657411, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000138 DASWGA010000000
VERSION     DASWGA010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3199
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1657411"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..321
                     /locus_tag="VF991_03385"
                     /pseudo
     CDS             1..321
                     /locus_tag="VF991_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489164.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
     gene            complement(345..2555)
                     /locus_tag="VF991_03390"
     CDS             complement(345..2555)
                     /locus_tag="VF991_03390"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEX9555511.1"
                     /translation="MTEHAKIKPVHLQRSACVYLRQSSQTQVEFNRESTTRQYALVAR
                     AAELGWAREQIDVIDEDLGVSGAGFAARSGFAKLTAEVALGHVGIVLGLEVSRIARNN
                     ADWYRLLDLCGLTDTLIGDADGIYHPGLFNDRLLLGLKGTMSEAELHVLRARLDGGIR
                     NKAARGELRRGLPVGFVWGDGDGEVLFHPNVAVTAAIRTVFDRFTELGSARRVWLWFR
                     AEGLAFPLQSHAKAEIRWVTPSYTAIHNVLSNPVYGGAYVYGKSRTERFVDENGRLKQ
                     RIRRLPRAEWSVLIADHHPGFIDWQTFDSNQIRLAANTKPLPHRAGGAVREGAALLQG
                     LAICGHCGRRLRTHYRGRNATPGYHCAGKHAVNGRGVYCFNVGGVQIDQAVSQAFLTA
                     LQPAGMEAAVAAAERLEADREGALAQWRLAVERAQYEAARAERRYRAVDPDNRLVARG
                     LEAEWELRLRELDQAKAELARRQQQRPQSLDAAARHTLLRLGTDIERAWSAPTTAPRD
                     RKELLRTLLEDVTIAVHRGEHQVHLTLRWRGGALTELDVDLPRFRPATVRTDEATVAL
                     VRRLAVLYPDAVIAGVLNRQKRTTARGHRFTANHVCSLRHRWNIPRVELPAAPVDGEL
                     VNVRQAAAILDTAPSTIHRWLNDGIIAGEQLTPGAPWRIRITDDLRSRLVDAPREGYV
                     TMQQMTRTLGVSRQTVLQRVKRGELHAVRIRQGRRKGLRIKLIQDHPDLFGNHP"
     gene            complement(2555..2998)
                     /locus_tag="VF991_03395"
     CDS             complement(2555..2998)
                     /locus_tag="VF991_03395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555512.1"
                     /translation="MTVVRQGHAFEGMALEVMGQLHRDGLHLLVILPDGSRSLIPVGW
                     TDLAAGQRPAVVVPGNLGALAELLQARAIVNALLDRLAPLRDEVPAATVEETLRATDL
                     GVSQRAQVTFQPVGPDRSRSSHRRHRGPGAVARPSCPRRDTGGGE"
BASE COUNT          546 a          991 c         1149 g          513 t
ORIGIN      
        1 gccgatctcg atcgcaggat cgaagatttg agcgatcggg tccatcgggg agcctatcgg
       61 gcgcagccct cgcggcgtcg gtacattccg aagcccgatg ggcggcagcg tccgctggca
      121 gtcgccgccc ttgaggacaa agttgtccaa cgggccacca ctgcgctgct gaatgcgatc
      181 tacgaggagg aattcctcgg gttcagctat ggattccgcc cgggccgcgg ccagcacgat
      241 gcgctggacg cgctccacgt cgggatcgac agcagaaagg tgaaccacat tctggacgcc
      301 gatattgccg ggttcttgga ttgtgcatca aattgccccc aggctcacgg gtggttgccg
      361 aagaggtcgg ggtggtcctg gatcagcttg atccgtaggc ctttccgccg accctgccgg
      421 atgcggacgg cgtgcagctc gccacgcttg acacgctgca acacggtctg gcgggagacg
      481 cccagcgtgc gggtcatctg ctgcatggtg acgtagcctt cgcgtggagc gtcgacgagc
      541 cgggagcgca ggtcgtcggt gatccggatg cgccagggtg cgcccggcgt cagctgctcg
      601 ccggcgatga tgccgtcatt gagccagcga tggatggtcg agggggcggt gtcgaggatg
      661 gctgcggctt ggcggacgtt gaccagttcg ccatcgacgg gcgccgccgg cagttcgacg
      721 cgcgggatat tccagcggtg acgcagactg cagacatggt tggcggtgaa acggtggccg
      781 cgggccgtgg tgcgtttctg ccggttgagg acgccggcaa tgaccgcgtc gggatagagg
      841 acggcaagac ggcgcacgag cgccacagtg gcctcgtcgg tgcgtacggt tgccggtctg
      901 aagcgcggca ggtcgacatc aagctcagtg agggcgccgc cgcgccagcg caaggtgaga
      961 tgcacctgat gttcgccgcg atgtaccgcg atggtgacgt cttcgaggag cgtgcgcagc
     1021 agctccttgc ggtctctggg cgcggttgtg ggtgccgacc aggcgcgctc gatatcggtg
     1081 cccaggcgca ggagcgtgtg gcgcgccgcg gcatcgagtg attgcggccg ttgctgctgg
     1141 cggcgtgcga gttcggcctt ggcctgatcg agttcacgca ggcgcaattc ccattcggcc
     1201 tcgaggccgc gggcgaccag gcggttatcg ggatcgacgg cgcggtagcg gcgttcggcg
     1261 cgcgcggcct cgtattgggc tcgctcgacc gccaggcgcc attgagcgag agccccctcg
     1321 cggtcagcct cgagccgttc ggcggcggcg acggcagcct ccatcccggc cggctggagc
     1381 gccgtcagaa aggcctggga gacggcttgg tcgatctgca cgccgccaac attgaagcag
     1441 tagacgccgc ggccgttgac cgcgtgcttg ccggcgcagt gataacctgg ggtggcgttg
     1501 cgcccgcgat agtgggtgcg caggcggcgg ccgcaatgac cgcagatggc gaggccctgc
     1561 agcaacgccg caccctccct gacggccccg ccggcgcgat ggggcagcgg cttggtattg
     1621 gcagcgagcc gtatctggtt ggagtcgaag gtctgccaat cgatgaagcc cggatggtga
     1681 tccgcaatca gcaccgacca ctcggcgcgc ggaagacggc gtatgcgctg cttgagcctg
     1741 ccattctcat cgacgaaacg ttcggtgcgg ctcttgccgt aaacgtaagc gccgccatag
     1801 accggattgc tcaggacatt gtggatcgcg gtgtagctcg gcgtgaccca gcggatctcg
     1861 gccttggcgt gggactggag cggaaaggcc aagccttcgg cgcggaacca gagccagacg
     1921 cggcgggccg agcccaactc ggtaaagcgg tcaaagacgg tgcggatggc ggccgtgacg
     1981 gcgacattgg gatggaagag aacctcacca tccccatcac cccagacgaa gcccacgggc
     2041 aagccgcgac gcagctcgcc gcgagccgcc ttgttgcgga tgccgccgtc gaggcgggca
     2101 cgcagcacat ggagttcggc ttcgctcatg gtgcccttca ggccgaggag caggcggtcg
     2161 ttgaacaagc ccggatgata gatgccgtca gcgtcaccga tcagggtatc cgtaaggccg
     2221 cagaggtcca gcaggcgata ccagtcggca ttgttgcggg cgatccggga gacctcaaga
     2281 ccgagcacga tgccgacatg cccgagggcg acctcggcgg tgagcttggc gaagccgctg
     2341 cgcgcagcaa atccggcgcc cgagacgccg agatcctcgt cgatcacatc gatctgctcg
     2401 cgtgcccagc cgagttcggc ggcgcgggcg accagggcgt actgccgcgt ggtcgattcg
     2461 cgattgaact cgacctgggt ctggctggat tggcgcaggt agacgcaggc ggaacgctgc
     2521 agatgcaccg gcttgatctt ggcgtgctca gtcatcactc gccgcctccc gtgtcgcggc
     2581 gaggacaact tgggcgagca accgcgccag gacctcgatg gcggcggtgc gagcttcggg
     2641 atcgatccgg tcccacgggc tggaaggtga cttgagctcg ttgagaaacg ccaaggtcag
     2701 ttgcacgcaa ggtctcctcc acggtggcag ccggcacctc atcccgcagc ggggcaaggc
     2761 gatcgaggag agcgttcacg atggcgcgcg cctgcaacag ctcggcgagg gcgccgagat
     2821 tgccgggcac gacgacggcc ggccgttgac cggctgccaa atcggtccac ccaaccggga
     2881 tgagcgaacg gctaccgtcg ggaagaatca cgagcaggtg caggccgtcg cgatgcagct
     2941 gccccatgac ctccaaggcc atgccttcga aagcgtgacc ttgacgcacg acggtcaccc
     3001 ggcacggaac ctcgcggaga tgggtagtgt gtcgacccgt ccttcgacct gccagcggca
     3061 gcgcgcgaat aaacgcggcg tcgggtgtcg tggcttcagg ccgtcaacga ccgctattga
     3121 gccaggcgca tcacaggccg cccagatcgg gaaggaccgc tgtccacgtg cgccgtgaca
     3181 aggcggcgct ttccagcgg
//
LOCUS       DASWGA010000139         4043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2045581, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000139 DASWGA010000000
VERSION     DASWGA010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4043
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2045581"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VF991_03400"
     CDS             complement(<1..426)
                     /locus_tag="VF991_03400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9555513.1"
                     /translation="MTPGAQVAAAIDILTAIDTGDRPADDAAADYFRRRRYIGAKDRA
                     HIAGHVYPVLRHRAALDWWIGKYRVDVEPRSRVMAALVLIEGWRPETIVACCDGDRFR
                     PTRLSEAEERLVRGLTARTLHHPEMPRAVANDLPEWLVPY"
     gene            complement(619..2082)
                     /gene="guaB"
                     /locus_tag="VF991_03405"
     CDS             complement(619..2082)
                     /gene="guaB"
                     /locus_tag="VF991_03405"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEX9555514.1"
                     /translation="MQFQEALTFDDVLLKPAASAVLPNQTDIRTRLSRTIELGIPLMS
                     AAMDTVTEAAMAIAMAQVGGIGVIHKNLDPEAQANEVRKVKKFESGMVVNPVTIHPEQ
                     SLADALALMSAHQISGIPVVKQGSGELVGILTNRDVRFATDNSMAVSALMTKDNLVTV
                     REGATKEEAKRLLHKYRIEKLLVVDGAYRCIGLITVKDIEKANKFPGASKDEKGRLRT
                     AAATGVGDDGLRRAQLLIDAEIDMIVVDTAHGHSRGVLDAVSRVKKLSNYTQVMAGNI
                     ATAEGAQALIDAGADAVKIGIGPGSICTTRVVAGVGVPQLTAILEAAEVCRAAGVPAI
                     GDGGIKYSGDLAKALAAGADCAMIGSLLAGTDEAPGEVVLYQGRSYKSYRGMGSLGAM
                     ARGSADRYFQQEVTSTLKLVPEGVEGRVPHKGPVGNIVYQLIGGLRAAMGYTGNRTIR
                     EMQQNCTFVRITPSGLRESHVHDVAVTREAPNYPQDR"
     gene            complement(2199..2708)
                     /locus_tag="VF991_03410"
     CDS             complement(2199..2708)
                     /locus_tag="VF991_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 domain-containing protein"
                     /protein_id="HEX9555515.1"
                     /translation="MALGMYAASVPVYQRQLGALSKILEKGAAWAAAKKVDEAVLGAT
                     RLIPDMLPLTRQVQFACRFAEESPARLAGIEAPKAPENAEKTLAELGGRIDAVLAHLK
                     GFKPEQLDGSENREIVLTIGGNPLKLTGQQYLLHFALANFYFHCTTTHAILRHCGVDV
                     GKRDFLGAI"
     gene            complement(2743..3432)
                     /locus_tag="VF991_03415"
     CDS             complement(2743..3432)
                     /locus_tag="VF991_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEX9555516.1"
                     /translation="MARGKGSLPTGRRATVRVKTARGRTVSSQRWLQRQLNDPYVAEA
                     RKRGYRSRAAFKLLQLDDQFRFLKPGARVVDLGAAPGGWTQVAVERVKPERSSGIVIG
                     IDITPVEPIAGATVLAKDFYDDDAPAALTALLAGPADVVLSDMAASATGDTQTDHLRI
                     IALAETAHDFARQVLKPGGTFVSKVLRGGTERGLLDRLKRDFVKVRHVKPEASRADSA
                     EMYVVATGFRG"
     gene            complement(3436..>4043)
                     /locus_tag="VF991_03420"
     CDS             complement(3436..>4043)
                     /locus_tag="VF991_03420"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555517.1"
                     /translation="GSTEVSWIRVFARHDRLGGVATELLDMTSVPWGVVTLTESCVKS
                     QPRAQPVSRACYDDMVERIRADLRVFCAKHGIGGAIARGEVQMIGVSGTVTTVSAHHL
                     GLKRYNRTLVDGSRIGREQILRICDQLSVLSVDELTDLPCIGNDRADLALAGGAILEA
                     VCRQWQAPMVRVADRGLREGVLMDLMRQADREADPFCRREV"
BASE COUNT          606 a         1334 c         1430 g          673 t
ORIGIN      
        1 gtagggcacg agccattccg gcagatcgtt cgccaccgcc cgcggcattt cggggtggtg
       61 caaggtgcga gcggtcagac cgcgcaccag ccgttcctcc gcctcgctga gccgcgtcgg
      121 acgaaagcgg tcgccgtcac agcacgccac gatcgtctcg ggccgccacc cctcgatcag
      181 gacaagagcg gccatcaccc ggctgcgggg ttcgacatca accctatatt tgccgatcca
      241 ccaatcgagc gccgcgcggt gccgcagtac cggatagaca tggccggcga tgtgcgcacg
      301 gtccttggcg ccgatatacc gtcgccgacg aaagtaatcg gccgcggcgt cgtcggccgg
      361 acggtcaccc gtgtcgatcg cggtgagaat gtcgatcgcg gctgcgacct gtgcgcccgg
      421 tgtcaatgag cccctgcgtc gggacgcgca ccagcccctc tcccgcattg cgggagaggg
      481 tgccgagcgc agcgaggcgg gtgagggcgg cgcgaaccga gatacgccct caccctccca
      541 gcccttgggg ctgggtccct ccctctcccg cggtgcggga gaggggctga tgagaggggt
      601 cggagcactg gaacctgctc aacggtcctg cggataattt ggcgcttcgc gggttaccgc
      661 gacatcgtgg acgtggctct cgcgcagccc cgaaggggtg atccgaacaa aggtgcagtt
      721 ctgttgcatc tcgcggatcg tgcggttgcc ggtatacccc atcgcagccc gcaatccgcc
      781 gatcaactga tagacgatat tgcccaccgg tcctttgtgc ggcacccgcc cctcgacgcc
      841 ctcgggcacg agcttcaagg tgctggtcac ctcctgctgg aagtagcggt cggccgagcc
      901 gcgcgccatg gcgccgagcg agcccatgcc gcggtacgat ttgtaggaac ggccctggta
      961 gaggacgacc tcgcccggcg cctcgtcggt gccggcgagc agcgagccga tcatggcgca
     1021 gtcggcgccg gcggcgagcg ccttggcaag gtcgccggag tatttgatac cgccgtcgcc
     1081 gatcgccggc acgccggcgg cgcggcagac ctcggcggcc tcgaggatgg cggtgagctg
     1141 cggcacgccc actccggcca ccacgcgggt ggtgcagatc gagcccgggc cgatgccgat
     1201 cttcaccgcg tcggcgccgg cgtcgatcag cgcctgcgcg ccctcggccg tggcgatgtt
     1261 gccggccatc acctgggtgt agttgctgag cttcttgacc cggctcaccg cgtcgagcac
     1321 gccgcgcgaa tggccgtgcg cggtgtcgac cacgatcatg tcgatctcgg cgtcgatcag
     1381 gagctgggcg cggcgcagcc cgtcgtcgcc gacgccggtc gccgcggcgg tgcgcaggcg
     1441 gcccttctcg tccttgctgg cgccggggaa cttgttggcc ttctcgatgt ccttgacggt
     1501 gatcaggccg atgcaacgat aggcgccgtc gaccaccagc agcttctcga tgcggtactt
     1561 gtgcaagagc cgcttggctt cctccttggt ggcgccctcg cgcaccgtga ccaggttgtc
     1621 cttggtcatc agcgcgctca ccgccatgga attgtcggtg gcgaagcgca cgtcgcggtt
     1681 ggtcaggatg cctacaagct cgccgctgcc ctgcttgacc acggggatgc cggagatctg
     1741 atgcgccgac atcagggcca gcgcgtcggc caggctctgc tcgggatgga tggtgacggg
     1801 gttcaccacc atgcccgatt cgaacttctt gaccttgcgc acctcgttgg cctgggcctc
     1861 gggatcgagg ttcttgtgga tgacgccgat gccgccgacc tgggccatgg cgatcgccat
     1921 ggcggcttcg gtgacggtgt ccatcgccgc cgacatcagc ggaatgccga gctcgatggt
     1981 tcggctgagc ctggtgcgga tgtcggtctg gttgggcagg accgccgagg cagccggctt
     2041 caggaggacg tcatcgaaag tgagcgcttc ctgaaactgc atgccaacct ccgtgcggag
     2101 aaaacaaaac cggcggcccc cctcctcgtt gaattgggga ggaccgccgg gttggcggcg
     2161 ctttatacac tatggcgcgg gcaagccaag ggccgtcgtc agattgcccc aaggaaatcg
     2221 cgtttcccga cgtcgacgcc gcagtggcgc aagattgcgt gcgtggtcgt gcaatggaaa
     2281 tagaagttcg ccagggcgaa atgcagcaga tattgctgtc cggtgagctt cagcgggttg
     2341 ccgccgatgg tgagcacgat ctcgcggttc tcgctgccgt ccagctgctc gggcttgaaa
     2401 cccttgagat gggccagcac cgcgtcgatg cggccgccga gctcggccag ggtcttctcg
     2461 gcgttttccg gcgccttggg cgcctcgatg ccggccagcc gcgccgggct ctcctcggcg
     2521 aagcggcagg cgaactggac ctggcgggtg agcggcagca tgtcggggat cagccgggtg
     2581 gcgcccagca ccgcctcgtc gaccttcttg gccgcggccc aggccgcgcc tttttccagg
     2641 atcttggaga gggcgccgag ctggcgctgg tagacgggaa cggatgcggc gtacatgccg
     2701 agagccattt ttaatcctcc ggttgggctg agggcgggaa atctagccgc gaaagccggt
     2761 ggcgacgaca tacatttccg ccgagtcggc gcgactcgcc tccggcttga cgtggcggac
     2821 ttttacgaag tcgcgcttca gccggtcgag caggccgcgc tcggtgccgc cgcgcagcac
     2881 cttggagacg aaggtgccgc cgggcttcag cacctggcgg gcgaagtcgt gcgcggtctc
     2941 ggccagcgcg atgatgcgca gatggtcggt ctgggtgtcg ccggtggccg aggccgccat
     3001 gtcgctcagc acgacgtcgg ccgggcctgc cagcagtgcc gtcagagcgg ccggcgcatc
     3061 gtcgtcgtaa aaatccttgg ccagcacggt ggcgccggcg atcggttcga ccggcgtgat
     3121 gtcgatgccg atcacgatgc cggaggaacg ctcgggcttg acgcgttcga cggcgacctg
     3181 cgtccagccg ccgggcgcgg cgccgaggtc gaccacgcgc gcgcctggct tgaggaaacg
     3241 gaactgatcg tcgagctgca gcagcttgaa ggcggcgcgc gagcggtagc cgcgtttgcg
     3301 ggcttcggcg acatagggat cgttgagctg gcgctgcagc cagcgctgcg aggagacggt
     3361 gcggccgcgc gcggtcttga cgcgcaccgt ggcccgccgg ccggtcggca ggcttccctt
     3421 gccgcgcgcc atgtctcaga cctcgcgccg gcagaacgga tcggcctcgc ggtcggcctg
     3481 gcgcatcagg tccatcagca cgccctcgcg caggccgcga tcggcgaccc gcaccatggg
     3541 cgcctgccat tgccggcaca ccgcctcgag gatggcgccg ccggccagcg ccaggtcggc
     3601 gcggtcgttg ccgatgcagg gcaggtcggt gagctcgtcg accgacagca ccgagagctg
     3661 atcgcaaatg cgcaggatct gctcgcggcc gatgcgcgag ccgtcgacca gggtgcggtt
     3721 gtagcgtttc aggccaagat gatgggcgct caccgtggtc acggtgcccg agacgccgat
     3781 catctggacc tcgccgcggg cgatggcacc gccgatgccg tgcttggcgc aaaagacgcg
     3841 caggtcggcg cggatgcgct cgaccatgtc gtcgtagcag gcgcggctca ccggctgggc
     3901 gcgcggctgg cttttgacgc aggattcggt gagcgtcacc acgccccacg gcaccgaggt
     3961 catgtcgaga agctcggtgg cgacgccgcc caggcggtcg tggcgagcaa agacgcggat
     4021 ccagctcacc tcggtcgagc cgc
//
LOCUS       DASWGA010000140         2226 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1790269, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000140 DASWGA010000000
VERSION     DASWGA010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1790269"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VF991_03425"
     CDS             <1..565
                     /locus_tag="VF991_03425"
                     /inference="COORDINATES: protein motif:HMM:NF012280.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555518.1"
                     /translation="PEAAVVVVEENDPASLSFADWALVLRHRDATSANKAAADKVWKA
                     ITDKQQGGSTRLKIPVKVIAATPDVIDAAITDEAQASNIADLHIAMARPLAPLPAVGA
                     TIAIVGTLSDYRPQPFRFLMTRAELAEESLPVAGGACADPRPQMCTREYRPACGLHRD
                     GSRKTYGNPCSACSDPGVVSQAAGACP"
     gene            complement(575..1405)
                     /locus_tag="VF991_03430"
     CDS             complement(575..1405)
                     /locus_tag="VF991_03430"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX9555519.1"
                     /translation="MLKSILAVSEGGPDAAMSFTLGARVAGAFDGTVDALHLPVGPAG
                     GMVGGLAMSGEAMPLIMNLDDERLEERAKESERAYKEIVGSIKGATYAAAKTATLDTL
                     VAMGRCSDLLVLGRPGADPENVAPATVEAAIHECARPVMIAPPDPGSGPFGSVIVAWN
                     GSFQAARVVEYSLPFLAKASEITILVVGSTPDDVGAPYLARNLGRHGLKTTIDAIDPG
                     AVSGRARGRALLDYTHGKGADLLVMGAYGRGQVMSFLGLGGATGKVISSCRVPLLLAH
                     "
     gene            complement(1491..1937)
                     /locus_tag="VF991_03435"
     CDS             complement(1491..1937)
                     /locus_tag="VF991_03435"
                     /inference="COORDINATES: protein motif:HMM:TIGR01244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HEX9555520.1"
                     /translation="MSASLVGIDDRVAISGQLQPEDMKEIAAAGYVAVVNNRPDGEAA
                     FGQPRTADLKKAAEAAGLVFLDLPFSGPRASPDQVRAFADLLAERPGRVVAYCKSGMR
                     SSLLWGAAAIAGGRSLEDVLGAALRAGQNLEPVGETMMALAHATRR"
     gene            complement(1943..>2226)
                     /locus_tag="VF991_03440"
     CDS             complement(1943..>2226)
                     /locus_tag="VF991_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="VUT family protein"
                     /protein_id="HEX9555521.1"
                     /translation="PQLVFASAAAFLLSELADFAVYTPLQSRGLVLAVLASSVIGLIA
                     DSLLFLWLAFGSLDFLAGQIVGKLWMVLLSLPFIHWIRKHEIARQVVVE"
BASE COUNT          392 a          769 c          748 g          317 t
ORIGIN      
        1 gcccgaggct gccgtcgtcg tcgtcgagga gaacgacccc gcttcgctgt ccttcgccga
       61 ctgggcgctg gtcttgcgcc atcgcgacgc cacgtcggcc aacaaggcgg cggccgacaa
      121 ggtctggaag gcgatcaccg acaagcagca gggcggcagc acgcggctca aaatcccggt
      181 gaaggtgatc gccgccacac ccgatgtcat cgacgcggca atcaccgacg aggcacaggc
      241 gagcaatatc gccgatctgc atatcgccat ggcccgcccg ctggcgccgt tgccggcggt
      301 cggcgccacg atcgcgatcg tcggcaccct gagcgattac cgtccgcagc ccttccggtt
      361 cctcatgacg cgcgccgaac tggccgagga atcgctaccc gtggccggcg gcgcatgcgc
      421 cgatccgcgg ccgcaaatgt gcacgcgcga gtatcggccg gcctgcgggc tgcaccgcga
      481 cggcagccgc aagacctatg ggaatccctg cagcgcctgc agcgatcccg gcgtggtgag
      541 ccaggcagca ggcgcctgtc cttaactgac tagactaatg cgccagcaac agcggcacgc
      601 ggcaggacga gatcaccttg ccggtggcgc cgcccaggcc gaggaagctc atgacctgac
      661 cgcggccgta ggcgcccatc accagcaggt cggcgccctt gccgtgggtg tagtcgagca
      721 gcgcgcggcc gcgggcgcgg cccgacacgg cgcccggatc gatggcgtcg atggtggtct
      781 tgagcccgtg gcggccgaga ttgcgcgcca gatagggcgc gccgacatcg tcgggcgtgc
      841 tgccgacgac gaggatggtg atctcgctcg ccttggcgag gaacggcagg gaatattcga
      901 caacacgcgc cgcctggaaa ctgccgttcc aggccacgat caccgagccg aacgggccgc
      961 tgccgggatc cggcggggcg atcatcaccg gacgcgcgca ttcgtggatg gcggcctcga
     1021 ccgtggcggg cgccacgttc tcggggtcgg cgcccggccg gcccagcacc aaaaggtcgg
     1081 aacagcggcc catcgccacc agcgtgtcga gggtggccgt cttggcggcg gcataggtcg
     1141 cgcccttgat cgatccgacg atttccttgt aggcgcgctc gctctccttg gcccgttcct
     1201 ccagccgctc gtcgtcgaga ttcatgatca gcggcatcgc ctcgccgctc atggcaaggc
     1261 cgcccaccat gccgccggcc ggcccgaccg gcaggtggag tgcgtcgacg gtgccatcga
     1321 aggcgccggc cacgcgggcg ccaagcgtga acgacatggc ggcatcgggc ccgccttcgg
     1381 acacggccag gattgacttc aacatcgaga attcccccac tcaaacggac gcgattaaga
     1441 agggctcgcg cccggcatgc aagccgatac tttcggccgg cgaacgatcc ttaccggcgc
     1501 gtggcgtggg ccagcgccat catggtctcg cccaccggct cgaggttctg gccggcccga
     1561 agggccgctc ccagcacatc ctcgagcgag cgtccgccgg cgatggcagc ggcgccccac
     1621 aggagcgagg agcgcatgcc gctcttgcag taggcgacca cccgacccgg tcgttcggct
     1681 aaaagatcgg cgaaagcacg tacttggtcg gggctggcgc gagggccgga gaagggcagg
     1741 tcgaggaaga ccagcccggc ggcctcggct gccttcttca aatcggccgt gcgcggttgg
     1801 ccgaacgccg cttcgccgtc gggccggttg ttcaccaccg caacgtatcc tgccgccgcg
     1861 atctccttca tatcctcggg ctgcagctgg ccggagatgg cgacgcgatc gtcgatgcca
     1921 acgagggatg cggacatgct tgctactcca cgacgacttg ccgggcgatc tcgtgcttcc
     1981 tgatccaatg aatgaacggc agcgacagca acaccatcca tagcttgccg acgatctgtc
     2041 cggcgaggaa gtcgaggctg ccgaaggcca gccataaaaa cagcaggctg tcggcgatca
     2101 ggccgatcac gctgctggcc agaaccgcca ggaccaggcc acgcgattgc agcggcgtgt
     2161 acacggcaaa gtcggccagc tccgacaaca ggaaagcggc ggccgacgca aacaccagtt
     2221 gcggcg
//
LOCUS       DASWGA010000141         2050 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2045785, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000141 DASWGA010000000
VERSION     DASWGA010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2045785"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..763)
                     /locus_tag="VF991_03445"
     CDS             complement(<1..763)
                     /locus_tag="VF991_03445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEX9555522.1"
                     /translation="MSVTLDILDIGARGDGIAEDQGRRYFVPFTLPGERVEAEPRGEH
                     RPGRGEGIAADLVEVLAPSRHRETPPCAHFKVCGGCALQHWRRDAYTAWKTELIARAL
                     AQRGVAAPRFEPPLVGAPGERRRADFVLRRQGRRVLAGFHERASPRIVDVGICVVARP
                     GLGALLEPLRKSLAAVLPEGGAADAIVNETDSGVDLLIRPHRRLELSLERREALVALA
                     EQADLARLSWGDRAAAEPIVVRRPPLLVFGEVRVEP"
     gene            complement(771..1769)
                     /locus_tag="VF991_03450"
     CDS             complement(771..1769)
                     /locus_tag="VF991_03450"
                     /inference="COORDINATES: protein motif:HMM:NF017864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEX9555523.1"
                     /translation="MNNPVVIEVTRGPLVESRHEGIAAVVKPDGTVAAAWGDIDAAIL
                     PRSANKPIQAMAFVESGAIERFGLGNEHIALACASHYGEKRHVDTVRAWLAKVGLGED
                     DLECGAHMPRLQASLEDLLRQGKTATAAHNNCSGKHSGFLSTAVQYGEPTRGYIKYDH
                     PVQRRLREVMSDLCGLDANAFPYGTDGCGIPTLATPLKSLARAMASMADPSRLSNKHA
                     EAATRIRAAMNAEPFMMAGTGAFGTRINAALPGVAEVKGGAEGVFCGMLPGLGLGVAL
                     KMWDGAGRASEVAMAALLNHLGVLPAEQRDEILHPPVRNVVGLLVGEMRPAKSWLG"
     gene            complement(1766..>2050)
                     /locus_tag="VF991_03455"
     CDS             complement(1766..>2050)
                     /locus_tag="VF991_03455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555524.1"
                     /translation="KRGLLTEEEAVHHPARHTLREAVMGEPLTLIDKGRRRLGADAKL
                     LLCSDGVQTLSAKDIEAGAVKPVRGLIDAVLAAADEHQDNITVVKLERVR"
BASE COUNT          281 a          743 c          708 g          318 t
ORIGIN      
        1 gcggctcgac acggacttcg ccgaacacca ggaggggtgg ccggcgcacg acgatgggct
       61 cggcggcggc gcgatcgccc cagctcagcc gggcgaggtc cgcctgttcg gcgagggcga
      121 ccaacgcctc gcgccgttcg agcgagagct cgaggcggcg gtgcgggcgg atcagcagat
      181 caacgccgct gtcggtttcg ttcacgatcg catccgccgc gccgccctcg ggcagcaccg
      241 cggcgaggct tttgcgcagc ggctccagca gggccccgag gccgggtcgc gccaccacgc
      301 agatgccgac atcgacgatc ctaggactcg cccgttcgtg gaagcccgcc agcacgcgcc
      361 tgccctgccg gcgcagcacg aaatcggcgc gacggcgctc gcccggcgcg ccgaccagcg
      421 gcggctcgaa gcgcggcgcg gcgacgccgc gttgcgccag cgcgcgggcg atcagctcgg
      481 tcttccaggc ggtgtaggcg tcgcgccgcc agtgctgcaa ggcgcagcca ccgcagacct
      541 tgaagtgcgc gcacggcggc gtttcgcgat ggcgcgacgg cgccagcact tcgacaaggt
      601 cggcggcgat cccctcgccg cgcccaggtc gatgctcgcc acgcggctcg gcctcgaccc
      661 tctcgccggg cagggtaaag ggcacgaagt agcgccggcc ctggtcctcg gcgatgccgt
      721 ccccgcgggc gccgatgtcc aggatgtcga gcgtgacgct cacatccctc tcaccccagc
      781 cagcttttgg ccgggcgcat ctcgccgacc agcaggccaa ccacgttcct gaccggcgga
      841 tgaaggatct cgtcgcgctg ttcggccggc agcacgccaa gatggttgag cagcgctgcc
      901 atggcgactt cggaggcccg gccggcgccg tcccacatct tgagcgccac gcccagcccc
      961 aagcccggca gcatgccgca gaacacgcct tccgctccgc ctttgacctc ggccacgccc
     1021 ggcagcgcgg cgttgatgcg tgtgccgaag gcgccggtcc cggccatcat gaagggctcg
     1081 gcgttcatgg cggcgcgaat gcgcgttgcc gcttcggcat gcttgttcga cagccgagag
     1141 gggtcggcca tgctggccat cgcgcgcgcc aggcttttga gcggggtggc gagcgtggga
     1201 atgccgcagc cgtcggtgcc gtagggaaag gcgttggcat cgaggccgca caggtcgctc
     1261 atgacctcgc gcagccggcg ctgcaccgga tggtcgtact tgatgtagcc gcgcgtcggc
     1321 tcgccatact gcacggccgt gctcaggaag ccgctgtgtt tgcccgaaca gttgttgtgg
     1381 gccgcggtgg ctgtcttgcc ctggcgcagc aggtcctcga ggctcgcctg caggcgcggc
     1441 atgtgagcgc cgcattcgag atcgtcttcg ccgagcccga ccttggccag ccacgcccgc
     1501 accgtgtcga cgtggcgctt ctcgccgtag tgcgaagcgc aggccaaggc gatgtgctcg
     1561 ttgccgaggc cgaagcgctc gatcgcgccg ctttcgacga aggccatggc ctggatcggc
     1621 ttgttggccg atcgcggcag tatcgccgcg tctatgtcgc cccacgcggc ggcgaccgtg
     1681 ccgtcgggct tgacgaccgc ggcgatgccc tcgtgccggc tctcgaccag cgggccgcgc
     1741 gtcacttcga tgaccaccgg gttgttcatc gcacgcgctc caatttcacc accgtgatgt
     1801 tgtcctgatg ctcatcggcc gccgccagca cggcatcgat caggccacgc accggcttga
     1861 cggcgccggc ttcgatgtcc ttcgcgctca gcgtctgcac gccgtcgctg cacaacagca
     1921 gcttggcgtc ggccccgagc cggcggcggc ccttgtcgat cagcgtcagc ggctcgccca
     1981 tcaccgcctc gcgcagggtg tgccgggccg gatgatggac agcttcctct tccgtcaaca
     2041 ggccgcgctt
//
LOCUS       DASWGA010000142         2382 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1025097, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000142 DASWGA010000000
VERSION     DASWGA010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1025097"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VF991_03460"
     CDS             <1..697
                     /locus_tag="VF991_03460"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEX9555525.1"
                     /translation="IEPPGECRENHYVISELAKRLGAKHRGFDMTPWEIMDESLKDSG
                     MWDAETNWRKGGQDFHLGFETSHFLDGFAWPDKKFRFKPDWAAYGPRGKEMPELPDHF
                     DVIDNATADKPFRMVAAPARTFLNSTFTETPSSQKREVRPTVMMNLEDCAALGFVEGD
                     RLEIGTERGKTIVRCKPKAGQQKGVVVVEGIWPNRNFETGMGINALTSADPGWPHGGA
                     VFHDTAVWIRKAA"
     gene            694..1629
                     /locus_tag="VF991_03465"
     CDS             694..1629
                     /locus_tag="VF991_03465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division plane positioning ATPase MipZ"
                     /protein_id="HEX9555526.1"
                     /translation="MNSAFQPAPNPSIAQTQAARAVGRAHVLVIGNEKGGSGKSTTAL
                     HIAVALLGEGARVATLDLDARQATLGRYVENRAAYAKRKGVELAMPVHAAVPLSTLPD
                     RTAAEADERARLEAALEPMVGTVDFVIVDTPGSDTNLSRLAHTWADTLLTPLNDSFID
                     LDLLARVDPDTLKIVRPSIYAEAVWKQRQLRAIRGGRPVDWVVMRNRLSSLAARNKRD
                     MGNVIDALAKRIGFRVAAGLSERVIYKELFLNGLTLLDLKRGGGGPSLTLSHVAARQE
                     VRDLVAALNLPRPGADAPSAAPATASAITDPQAAG"
     gene            complement(1544..>2382)
                     /locus_tag="VF991_03470"
     CDS             complement(1544..>2382)
                     /locus_tag="VF991_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555527.1"
                     /translation="FHMMAGGLGSMAATLPIQWSLSVMSWQGLFFWLAGICLATAAIL
                     FVIVPERAASRSKGTLGEQFRITGIVLTDGFYWRIQPLLSIQQLAFIGCITLWIGPWL
                     RDVGGIADKEARADIQLYTTAVMTLGFAMSGVIAGGFRRIGVSNFASVGIASLLFALV
                     CGWLAFLPSFHPAVAWPLFGFLGACPIQYMPVMVASFPTHYAGRVTTSSNLVAFTVIF
                     AGQWAIGKIVDLWPKTATGYAPDGYTWAFGALFILQLAGLLWLMLSRARPMARPHLAA
                     AD"
BASE COUNT          435 a          784 c          823 g          340 t
ORIGIN      
        1 gatcgagccg ccaggcgaat gccgcgagaa ccactatgtg atctccgagc tcgccaagcg
       61 cctgggggcc aagcatcgcg gcttcgacat gacgccatgg gagatcatgg acgagtcgct
      121 caaggattcg ggcatgtggg acgccgagac gaactggcgg aaaggcggcc aggatttcca
      181 cctgggcttc gagacctcgc atttcctcga cggcttcgcc tggcccgaca agaagttccg
      241 cttcaagccc gactgggcag cctacggccc gcgcggcaag gagatgcccg agctgcccga
      301 ccatttcgac gtgatcgaca atgccacggc cgacaagccg ttccgcatgg tcgcggcgcc
      361 cgcgcgcacc ttcctgaact cgactttcac cgagacgccg agcagccaga agcgcgaggt
      421 gcggccgacg gtgatgatga acctggagga ctgcgcggcg ttgggatttg tcgagggcga
      481 tcggctcgag atcggcactg agcgcggcaa gaccatcgtg cgctgcaagc ccaaggccgg
      541 ccagcagaag ggcgtcgtgg tggtcgaagg catctggccc aaccgcaact tcgagaccgg
      601 catgggcatc aatgcgctga cctcggccga tcccggctgg ccgcacggcg gcgcggtgtt
      661 ccacgacacc gccgtctgga tccgcaaagc ggcgtgaaca gcgcgttcca accggcgccc
      721 aatccgagca tcgcccagac ccaggcggct cgcgctgtgg gccgtgccca tgtgctggtg
      781 atcggcaacg agaagggcgg ctcgggcaag tcgacgacgg cgctgcacat cgccgtggcg
      841 ctgctgggcg agggcgcgcg cgtggccacg ctcgatctcg atgcgcgtca ggcgacgctc
      901 ggccgctacg tcgaaaaccg cgccgcctac gccaagcgca agggcgtcga gctggccatg
      961 ccggtccatg ctgcggtgcc gctgtcgacc ctgccggatc ggacggccgc ggaagccgac
     1021 gagcgggcgc gcctcgaagc ggccctcgag ccgatggtcg gcacggtcga tttcgtgatc
     1081 gtcgatacac caggcagcga caccaatctg tcgcggctgg cgcacacctg ggccgatacc
     1141 ctgctgacgc cgctgaacga cagcttcatc gatctcgatc ttttggcgcg agtcgatccc
     1201 gacacgctca agatcgtgcg gccgtcgatc tatgccgagg cggtgtggaa gcagcgccag
     1261 ctgcgcgcca tccggggcgg ccggccagtc gactgggtgg tgatgcgcaa tcgcctgtcg
     1321 tcgctggccg cgcgcaacaa gcgcgacatg ggcaacgtta tcgacgcgct ggccaagcgc
     1381 atcggctttc gcgtcgccgc gggcttgagc gagcgcgtga tctacaagga gctgttcctg
     1441 aacgggctca ccctgctcga tctcaagcgc ggcggcggcg gtccgtcgct caccttgagc
     1501 catgtcgcgg cgcgtcagga ggtgcgcgac ctcgtcgccg cgctcaatct gccgcggcca
     1561 ggtgcggacg cgccatcggc cgcgcccgcg acagcatcag ccataacaga cccgcaagct
     1621 gcaggatgaa gagcgcgccg aacgcccagg tgtagccgtc gggcgcgtag ccggtggcgg
     1681 tcttgggcca cagatcgacg atctttccga tcgcccactg gccggcgaag atcacggtga
     1741 aggcgaccag gttgctgctg gtcgtgacgc gtccggcata gtgggtggga aacgaggcca
     1801 ccatcaccgg catgtactgg atcgggcagg cgcccaggaa gccgaacaac ggccacgcca
     1861 ccgccggatg gaaggacggc aggaaggcga gccagccgca gaccagggcg aacagcaggc
     1921 tggcgatgcc gaccgaggcg aagttgctga cgcctatccg gcgaaagccg ccggcgatca
     1981 cgccgctcat cgcgaacccc agggtcatga cggcggtggt gtagagctgg atgtcggccc
     2041 gcgcttcctt gtcggcgatg ccgccgacgt cgcgcagcca gggcccgatc cacagcgtga
     2101 tgcagccgat gaaggcaagc tgctgaatgg agagcagcgg ctggatgcgc cagtagaagc
     2161 cgtcggtcag cacaatgccg gtgatgcgga actgttcgcc gagcgtaccc ttggaccggc
     2221 tcgcagcgcg ttccggtacg ataacgaaca ggatcgccgc ggtggcgagg cagatcccgg
     2281 ccagccagaa gaacaggccc tgccagctca tgaccgagag cgaccattgg atgggcagcg
     2341 tcgcggccat cgagcccagg ccgcccgcca tcatgtggaa gc
//
LOCUS       DASWGA010000143         2164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_273167, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000143 DASWGA010000000
VERSION     DASWGA010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_273167"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VF991_03475"
     CDS             complement(<1..511)
                     /locus_tag="VF991_03475"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389167.1"
                     /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a
                     component of cell wall formation; gram-positive bacteria
                     have 2 copies of MurA which are active; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEX9555528.1"
                     /translation="MDRIRIKGGRQLKGEIRISGSKNASLPLMVAALLTDKTLTLHNV
                     PRLADISTMIQLLKQHGVEIGSAPGENGHAHGTTLTLQAGKIASTTAPYDIVRKMRAS
                     VLVLGALLAREGVARVSLPGGCAIGARPVDLHIAGLKAMGAKIDVDGGYLVAKAPKGL
                     KGARFTFPKV"
     gene            complement(524..1078)
                     /gene="dcd"
                     /locus_tag="VF991_03480"
     CDS             complement(524..1078)
                     /gene="dcd"
                     /locus_tag="VF991_03480"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEX9555529.1"
                     /translation="MTILSDRWIRRMAEDKAMIEPFVDAQKRQGVISYGLSSYGYDAR
                     VGRDFKIFTNVDSAVVDPKNFADNSFVDRTADVCIIPPNSFALARTVEYFRIPRDVLV
                     ICVGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGAAQFLFLQGNE
                     PCEISYRDKAGKYQGQRGVTLPKI"
     gene            1315..>2164
                     /locus_tag="VF991_03485"
     CDS             1315..>2164
                     /locus_tag="VF991_03485"
                     /EC_number="3.8.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF002043.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloalkane dehalogenase"
                     /protein_id="HEX9555530.1"
                     /translation="MADALRTPDEKFAGLPGWPYAPRYFERPDGLRLHYVDEGQRDGA
                     KVFLCLHGQPTWSYLYRRMIPIFVAAGHRVVAPDFVGFGRSDKPTDEALYTFDFHRDT
                     LLGLIEALDLRNIVLVVQDWGGLIGLTLPMAAPRRYASLLVMNTALGTGDVPLGEGFL
                     AWRAFSNRNPDMDIAGLMRRACPHLSEAEAAAYAAPFPDASYKAGVRRFPNLVPDRPD
                     AAGAALSSEARDFWQSRWTGKSLMAIGMKDPVLGPTVMRALHGIIRNCPAPMEIADGG
                     HFLQEWG"
BASE COUNT          322 a          718 c          734 g          390 t
ORIGIN      
        1 aaaccttggg gaaggtgaag cgcgcgccct tcagtccctt gggcgccttc gccaccagat
       61 agccgccgtc gacatcgatc ttggcaccca tcgccttcag gccggcgatg tggaggtcga
      121 ccggccgcgc gccgatggcg cagccgccgg gcagcgacac gcgcgccacc ccttcgcggg
      181 cgagcagcgc gcccagcacc agcaccgagg cgcgcatctt gcgcacgatg tcgtagggcg
      241 ccgtggtcga ggcgatcttg ccggcctgca gggtgagggt cgtgccgtgg gcgtggccgt
      301 tctcgcccgg cgccgacccg atctccacgc catgctgctt gagcagctgg atcatggtgg
      361 agatgtcggc gagcctcggc acattgtgca gcgtgagcgt cttgtcggtc agcaacgccg
      421 ccaccatcaa cggcaacgag gcgttcttgg agcccgagat gcggatctcg cccttgagct
      481 ggcggccgcc cttgatgcgg atgcggtcca tgatcgcctc ccctcagatc ttcggcaggg
      541 tgacgccgcg ctggccctgg tacttgccgg ccttgtcgcg gtaggagatt tcgcagggct
      601 cgttgccctg caggaacagg aactgcgccg cgccctcgtt ggcgtagatc ttggcgggca
      661 gcggcgtggt gttggagaac tccagggtga cgtgaccctc ccactcgggc tcgagcggcg
      721 tgacgttcac gatgatgccg cagcgcgcat aggtcgactt gccgacgcag atcaccagca
      781 cgtcgcgcgg gatgcggaaa tattccacgg tccgcgccag cgcgaaggaa ttgggtggga
      841 tgatgcagac gtcggcggtg cggtcgacga agctgttgtc ggcgaagttc ttggggtcca
      901 ccaccgccga atcgacgttg gtgaagatct tgaagtcgcg gccgacgcgg gcgtcgtagc
      961 cgtacgacga caggccgtag gaaatcacgc cttggcgctt ctgggcgtcg acgaagggct
     1021 cgatcatggc cttgtcctcg gccatgcggc ggatccagcg gtcggaaagg attgtcattg
     1081 gggggcttct aaaggaggga gcttgtagac gagaagattg gccggctcaa ccaccggtct
     1141 tgccggcgtt cgccggtttt tggctctccc ctttcgcccg tgcctgggcc ttgcgccgcc
     1201 tgaggttttc ccgcaaagcg gcagccagcc gctcggcgcg cctatcatcc tttggggcgt
     1261 ccttctgcgg gacgggtttt gagggggccg tcatggtcgg agaggataca ccatttggcc
     1321 gatgccctgc gcacacctga tgagaaattc gccggcctgc ccggctggcc ttacgcgccg
     1381 cgctatttcg agcggccgga cgggctcagg ctgcactatg tggatgaagg ccagcgcgat
     1441 ggcgccaagg tctttctctg cctgcacggc cagccgacct ggagctacct ctaccgccgg
     1501 atgatcccga tcttcgtcgc cgccggccat cgcgtggtgg cgccggactt cgtgggcttc
     1561 ggtcggtccg acaagcccac cgacgaagcc ctttatacct tcgactttca ccgcgacacg
     1621 ctgttgggcc tgatcgaggc cctcgacctt cgcaacatcg tgctggtcgt gcaggactgg
     1681 ggcggcctga tcgggctcac tttgccgatg gcggcgccgc ggcgctacgc gtcgctcctg
     1741 gtcatgaaca ccgcgctcgg caccggcgat gtgcctttgg gcgagggctt cctcgcctgg
     1801 cgcgccttct ccaaccgcaa tcccgacatg gacatcgccg gcctgatgcg gcgcgcctgt
     1861 ccgcacctca gcgaggccga agccgccgcc tacgccgcgc cctttcccga cgcctcgtac
     1921 aaggcgggcg tgcgccgctt ccccaatctt gtgcccgacc ggcccgacgc cgcgggcgcc
     1981 gcgctgtcga gcgaggcgcg cgacttctgg caaagccgct ggaccggcaa gagcctgatg
     2041 gcgatcggca tgaaggatcc cgtgctgggg ccaaccgtga tgcgcgcgct gcacggcatc
     2101 atccgcaact gcccagcgcc gatggagatc gccgacggcg gccacttcct gcaggaatgg
     2161 ggcg
//
LOCUS       DASWGA010000144        14443 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2165199, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000144 DASWGA010000000
VERSION     DASWGA010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 14443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14443
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2165199"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VF991_03490"
     CDS             <1..564
                     /locus_tag="VF991_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEX9555531.1"
                     /translation="EPWRLFDCCQENDGAAALIVVPAEDARDFRQPPAYLLGSAQGSE
                     YRNGARGHNAPLYATSSFTTVAPQLYDMAGVKPADVDVVQSYENFTGGVLMSLVEHGF
                     FKAEEANDFLTPKNLLAPAGKLPLNTSGGNLAECYMHGLELQVEAVRQLRGQSTSQVS
                     DAEVSMVISGPMVTPVSSMILGTEATL"
     gene            561..995
                     /locus_tag="VF991_03495"
     CDS             561..995
                     /locus_tag="VF991_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX9555532.1"
                     /translation="MSYLPSGLPIPVPESDGLDKPYWEATRRGELLVQRCRSCGTFQW
                     GPEWICHKCLSFDMDWRKVSGKGRIYSWERPWHPVHPALKGHGPYVVVLVELPDAGNV
                     RMLGNLLGDPKQDVRIGADVEAVFEAHDEAKPPFTLVQWKLV"
     gene            complement(992..1783)
                     /locus_tag="VF991_03500"
     CDS             complement(992..1783)
                     /locus_tag="VF991_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9555533.1"
                     /translation="MGQYSKVEIDGRLMTVTINRPEVYNACHPMANEELVAAFDEFHA
                     NPELWVAIITGAGDKAFCAGNDLKYHAELQARTGKRPSHPLKGFGGLANRFDLDKPVI
                     AAVNGVAMGGGFEIALACDLIIASDQARFALPEPKVGLAAGAGGMQRLSRMIPLKKAM
                     GMMLTGRHVSAKEGHELGFVTAVVPHAELMKEARRWADDILACSPMSVRATKQVVMRS
                     LDVPALEVAMHNQHYPAFVAMARSEDTVEGPKAFAEKRKPNWKGR"
     gene            1952..2407
                     /locus_tag="VF991_03505"
     CDS             1952..2407
                     /locus_tag="VF991_03505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555534.1"
                     /translation="MKLMKRTAVALLSVGPFAFSGGTYAATLNQNLFSLQDLPVVVDL
                     DGSLPVRAVARPQLEAQAKTKAAQPAAAITPAPSTADIVNKLLSPGPSDPTVPLPRAD
                     LAGESVQSGSSKKPQIFGRGEDGGGVFGLRVPIPADRNTSGSNTRYSPR"
     gene            2602..3540
                     /locus_tag="VF991_03510"
     CDS             2602..3540
                     /locus_tag="VF991_03510"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9555535.1"
                     /translation="MKKALMAAAALVALPVMAQAQSPSPGVYIGAEGGANWLLNTTIG
                     GFGVTPQTGWAAGGVIGYDFVGPRVELEGVYRNNQTNTGPFGTAVATQVGQLGILANL
                     LYDFMPASIITPYIGAGAGVGFVDSNASLGSTVFAYQGIIGLGWNVDTNFRVNIDGRY
                     YGTSNPTVNGSGWSNNNFSVMLGLQLKFGAVAPPPPPPPPAVAPPSFMVFFDWDRSNL
                     SQQALVTIKQAAGAFKSKGSARITATGHTDTSGPEAYNMALSLRRANAVKDALVREGV
                     PAQAITVIGRGESQLLVPTADGVREPQNRRVEIVIQ"
     gene            3698..4351
                     /locus_tag="VF991_03515"
     CDS             3698..4351
                     /locus_tag="VF991_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1013 domain-containing protein"
                     /protein_id="HEX9555536.1"
                     /translation="MSQVLMPKATAVWLVENTTLTFDQISAFTGLHPLEVQAIADGEV
                     AGGMTGLDPTTNGQLTKDEIKRVEADPAARLKLSPRDIPQPVARSKGPRYTPVAKRQD
                     RPDAIAWLLKVHPELQDSQVAKLVGSTKSTVQSVRDRTHWNMQNVRPRDPVTLGLCSL
                     KDLNDAVDKARRKAAREDAAKKKAAAKAAAPEQPAAADQAADPAEADQPDLGETRHN"
     gene            complement(4358..5350)
                     /locus_tag="VF991_03520"
     CDS             complement(4358..5350)
                     /locus_tag="VF991_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HEX9555537.1"
                     /translation="MSALPASMSCVEIKKPGGPEALVPATRPVPQPMAGEILIRVAAA
                     GVNRPDIAQRAGHYPPPPGASDLPGLEAAGTVAALGAGVTDWKVGDAICALTPGGAYA
                     EYCTAPAPQCLAVPKGFDMLRAAALPENYFTVWHNLFERGALKSGESALIHGGASGIG
                     TAAIQLAKAFGATVFTTVRNEGKAKAVRALGADHAILYKDNDWAAEVQKLGGGVDVVL
                     DMVAGDYLPKNLQLLKQDGRCVVIAVQLGAMATISAAVVMVNRLTLTGSTLRPQSVEN
                     KGRMARGLKDKVWPLLEAGKVKPIIYKTFPLKDAAGAHAELERADHVGKIMLTV"
     gene            5417..5605
                     /locus_tag="VF991_03525"
     CDS             5417..5605
                     /locus_tag="VF991_03525"
                     /inference="COORDINATES: protein motif:HMM:NF018413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1192 domain-containing protein"
                     /protein_id="HEX9555538.1"
                     /translation="MAFDLDDLDPRQKKTQPKNLDAMNVEDLKEYVAVLKAELARVEE
                     KIKAKQSHAAAAATLFKR"
     gene            5613..6908
                     /locus_tag="VF991_03530"
     CDS             5613..6908
                     /locus_tag="VF991_03530"
                     /EC_number="2.5.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase"
                     /protein_id="HEX9555539.1"
                     /translation="MADAKFLKPDTLALHAGQHPDPATGARAVPIYQTTSYVFRDVDH
                     AASLFNLEVGGHIYSRISNPTVAVFEERVAALEEGSGALGVASGQSALHIAIATLMGA
                     GGHIVASTSLYGGTRNMLGLTLPRFGIETTFVNPRDHDGFAKAIRPETRLVLGETIGN
                     PGGEVLDIPAIADIAHQAKIPLMIDNTFASPVLCRPLTLGADIVFHSATKFIGGHGVA
                     IGGVIVEGGRFDWEGSGKFPTLTEPYAGYHGIDFAEEFGPHAFIMRARTEGVRDFGSC
                     MAPQTAFYLLQGLETLPLRMARHVENARKVIGFLKANPAVERIASPELADHPDHALAK
                     KLLPKGAGSIFSFDIKGGREAGRRFIERLRLFSHLANVGDAKSLVIHPASTTHAQLDA
                     AALKEAGIGEGMIRLSVGLEDPGDLLDDLGQALRAAAKG"
     gene            6911..7699
                     /locus_tag="VF991_03535"
     CDS             6911..7699
                     /locus_tag="VF991_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9555540.1"
                     /translation="MELSVDGRAVFATTGGTDFDPAKPAVVFLHGAGFDRTAWRLQTR
                     WFAHHGRSVLAIDFPAHGRSAGPALESIAAMAEWTAALIEAAGLKNAALVGHSMGGLV
                     AIETAARFPDKVRALGLCGVAAEMPVHPEMLESAKADTLKVQELMTFWGMGNALHKGG
                     MVSPGLWLRRESLAVLSGNRAGVIHADLAACNAYKDALARAAAIRCPTVLVLGDGDLM
                     TPAAKAKPLAAAIAGSRTVVIANSGHFMMVERPDETLEALKEGV"
     gene            7704..8429
                     /locus_tag="VF991_03540"
     CDS             7704..8429
                     /locus_tag="VF991_03540"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555541.1"
                     /translation="MALVTGSTSGIGAATARRLVRDGYKVALHSRRSADVGRAMAAEL
                     PAASYHQADLGDEAATRGLVAAVVKQHGRLDVLINNAGESIRIPHGDLKAATPAVWRR
                     MLDINLIAPFVLTAEAEPALRQSAEGGRPACIVIIGTHSRVRPKGASIPYATAKAGLH
                     HATRLLALALGPAIRVNCVAPGLVETPMGAGWPEATELWNTKAPMRRPARPEDIADLV
                     AALVANDYVTGEIVIADGGLNLT"
     gene            8518..9273
                     /locus_tag="VF991_03545"
     CDS             8518..9273
                     /locus_tag="VF991_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF169 domain-containing protein"
                     /protein_id="HEX9555542.1"
                     /translation="MLSEASTKLIDLLRIRTQPIGMRLFEDAADMEKIQGVRKPTEGF
                     KFTMCQMVTQSRWYGFTLGITVDNTRGGNCGGVVGLNHPGEGFLSGDHMNGVWFGNKE
                     ASAAHQAQMPRVPDGKYNGLVVAPLRSARLDPPDICLFYGTPGQMIYFINGLQFHRYR
                     RYDFTVTGESACADSWGRALATRQTSLSLPCYAERRYGGVADDELLMACPPDEFLRAI
                     EGMGHLGKNGLRYPFPPYGAAMDPSFGMAKSYG"
     gene            9275..9775
                     /locus_tag="VF991_03550"
     CDS             9275..9775
                     /locus_tag="VF991_03550"
                     /inference="COORDINATES: protein motif:HMM:NF024952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HEX9555543.1"
                     /translation="MLYVVAWPVLAEADDTALRRLRAQYHPGEADLIGPHFTLVFGTD
                     AHHETRLRGLLDTLAGRRPFWFVLDRLVRHDLTPPSRSAYLYAVPADGGAELTSLHDE
                     LNPAPGPEPFEPHITLGLFERAADAEQVARIVERQHLPMHGRIEELALLRRNGDALEA
                     LKSVRL"
     gene            complement(9772..11532)
                     /locus_tag="VF991_03555"
     CDS             complement(9772..11532)
                     /locus_tag="VF991_03555"
                     /inference="COORDINATES: protein motif:HMM:NF013506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEX9555544.1"
                     /translation="MRRFIVGLLATVGTLTLLAVGGLVAVVASSPFSNKPLTKPIVLS
                     VDLRDVPPETSSGNLLRGGLLRGSRDILDTVQLLWQAADDPRVVGLFVDIGDESAGLA
                     RVQELRQAIAHFRGKGKFAIGFAESLGSGGAHFSDYYLASALEQVWLQPSGGFAVAGI
                     AIETPFLKAGLDKLGVQVEGGKRYQYKSAPDSFLETGYTGPARENLQQLLDSLYSQFV
                     SDVARERHIEPAKLRQLIDSVPFEPERARQENLIDKIGYRSDALDEVRTRTGKVRDLT
                     SLSDYAADEGRSKPHGEVVGMVRVRGAIMSGPGGGGALDDDNVARAEDVVDALDQATR
                     AKDVRAIVLRIDSPGGTYPAADAIADAVGRARAAGKPVIVSMGDVAASGGYLAAVRGD
                     VIVAQPTTITASIGVFGIWPVASELLTTLGIRVERLAVGTNAGMYSTFQAPTPTQRAA
                     VSRELDTIYAEFTRQVGEARKLDGAKLDAAARGRVFSGNDAKKAGLIDELGGLQLALN
                     IAKAKANIEESRQIEIRHFPPESERWQKMLDRLLRLAGLDAETPTLRAPREVRETLAR
                     FGIVGRPGNVRLPPLAPLWH"
     gene            complement(11553..12086)
                     /locus_tag="VF991_03560"
     CDS             complement(11553..12086)
                     /locus_tag="VF991_03560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555545.1"
                     /translation="MASRGVEARYGRLHNLGMAVVSAVMIGAAILHFANNPANAPSLS
                     LNDPRFVLFAMLAAAMGYYVFVGVSRTLNRQPQVVIDRDGIGLGFGRDRRFTWDDIEW
                     VRLRRLALRPQLEVGIASQVFMAANLRLSMWNFDDGLRPIRGLPSAVLVRDNGLDISA
                     SAMLDAVKAFRPNLVKS"
     gene            complement(12095..13165)
                     /gene="aroC"
                     /locus_tag="VF991_03565"
     CDS             complement(12095..13165)
                     /gene="aroC"
                     /locus_tag="VF991_03565"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEX9555546.1"
                     /translation="MAGNSFGTLFRFTSWGESHGPAIGCVVDGTPPRIPLSEADIQVW
                     MEKRRPGQSRFVTQRQEPDTVKILSGVFEGVTTGTPIALHIGNVDQRSRDYSEIKDKF
                     RPAHADYTYFKKYGVRDYRGGGRQSARETAVRVAAGAIARKILGDAVSIRGAVVQLGS
                     QKIDRAKWDWAATADNPFWCPDRQAAQGWEGYLDDVRKRGSSCGAVIEVVASGVAVGL
                     GDPVYDKLDADLAKALMSINAVKGVEVGDGFVAAAMSGEENADEMRIKDGAPVFLSNH
                     AGGILGGISSGQDIVCRLVVKPTSSILAPVRSIDRFGNEVELRTKGRHDPCVGIRATP
                     VAEAMVACVLADHLLRHRAQCG"
     gene            complement(13179..14015)
                     /gene="fabI"
                     /locus_tag="VF991_03570"
     CDS             complement(13179..14015)
                     /gene="fabI"
                     /locus_tag="VF991_03570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEX9555547.1"
                     /translation="MTVAGQLMAGKKGLVMGVANERSIAWGIAKACHEHGAEVAFTFQ
                     GEALEKRVRPLANSIGAKIIVPCDVTNAASIDATFSEIGKSWGELDFLVHAIAFSNKD
                     ELRGRYIDTSPENFELTMNVSCFSFTAVAQRAVPLMKNGGSLLTLTYYGAERVIPHYN
                     VMGVAKAALEASVRYLAADLGEQKIRVNAISAGPIKTLAFAGINDGRYILKWNELNSP
                     LKRNITAEEVGNAGLYLLSDLGTAVTGEVMHVDGGYHIVGMIKTSSAKQIAELLGNFE
                     GE"
     gene            14094..>14443
                     /locus_tag="VF991_03575"
     CDS             14094..>14443
                     /locus_tag="VF991_03575"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008595399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase"
                     /protein_id="HEX9555548.1"
                     /translation="MIGEKSDPLALFGEWYEAAAKNEPNEPSAMGLATVAPDGMPSVR
                     MVLLKGYDAAGFVFYTNTESRKGLHLRDHPKAALLFHWKSLRRQVRLEGPVSPVTSEE
                     ADAYFATRARGSQIG"
BASE COUNT         2395 a         4821 c         4813 g         2414 t
ORIGIN      
        1 gaaccgtggc gtctgttcga ttgctgccag gagaacgacg gcgccgcggc gctgatcgtg
       61 gtcccggccg aagacgcgcg cgacttccgc caaccgccgg cctatctgct gggttcggcg
      121 caaggctcgg agtatcgcaa cggcgcgcgc ggccacaacg caccgctcta cgccacgtcg
      181 agcttcacca ccgtggcgcc gcagctttac gacatggcgg gcgtgaagcc cgctgatgtc
      241 gacgtggtgc agagctacga gaacttcacc ggcggcgtgc tgatgagtct ggtggagcac
      301 ggcttcttca aggccgaaga ggccaacgac ttcctgacgc cgaagaacct gctggcaccc
      361 gccggcaagc tgccgctcaa cacctcgggc ggcaatctgg cggagtgtta tatgcacggc
      421 ctcgaactgc aggtcgaagc ggtgcgccag ttgcgcgggc aatcgacttc gcaggtgtcc
      481 gacgcggaag tgtcgatggt gatttccggg ccgatggtga cgccggtctc cagcatgatc
      541 ctgggcacgg aggcgacgct gtgagctatc tgccgagcgg attgccgatt ccggtgcccg
      601 aaagcgacgg cctcgacaag ccttactggg aagccacgcg acggggcgag ctgctggtgc
      661 agcgctgcag gagctgcggc acgtttcagt ggggccccga atggatctgc cacaagtgcc
      721 tgtccttcga catggactgg cgcaaggtgt cgggcaaagg ccgcatctat agctgggagc
      781 ggccctggca tccggtgcat ccggcgctga aagggcacgg tccctacgtc gtcgtcctgg
      841 tcgagctgcc cgacgccggc aacgtgcgca tgctgggcaa ccttctgggc gatcccaagc
      901 aggacgtgcg gatcggcgcc gacgtggaag cggtgttcga agcgcacgac gaggcgaagc
      961 cgcctttcac cctggtgcag tggaagctgg tttaacggcc cttccagttg ggcttgcgct
     1021 tctcggcgaa ggccttcggc ccctcgaccg tgtcctcact gcgcgccatg gcgacgaaag
     1081 cggggtaatg ctggttgtgc atcgccacct cgagcgcggg cacgtcgagc gagcgcatca
     1141 cgacctgctt ggtggcgcgc accgacatcg gcgagcaggc gaggatgtcg tcggcccagc
     1201 gccgcgcttc cttcatgagc tcggcgtgcg gcacgacggc ggtgacgaag cccagctcat
     1261 ggccttcctt ggccgagacg tggcggccgg tcagcatcat gcccatcgcc ttcttgagcg
     1321 ggatcatgcg cgacaggcgc tgcatgccgc cggcgccggc ggccaggccg accttgggct
     1381 cgggcaaggc gaacctggcc tggtcggagg cgatgatgag gtcgcaggcg agcgcaatct
     1441 cgaagccgcc gcccatggcg acgccgttca cggccgcgat caccggcttg tcgaggtcga
     1501 agcggttggc cagcccgccg aagcccttca gcggatggct cggccgcttg cccgtcctgg
     1561 cttgcaactc tgcgtggtat ttcaggtcgt tgccggcgca gaacgccttg tcgccggcgc
     1621 cggtgatgat ggccacccag agctcggggt tggcgtggaa ttcatcgaag gcggcgacga
     1681 gctcctcgtt cgccatggga tggcaggcat tgtagacctc cggccggttg atggtgacgg
     1741 tcatcagccg tccgtcgatc tcgaccttgc tgtattggcc catggcgctt ccctcgcggt
     1801 tttgatgaac gagggtttac cgtaagtcgg gctgatacaa aacgccgctc tcggccctgt
     1861 ggccgcaaaa tagccacttg aagaaggtga atacgaacta ggcagcagga aatctaggca
     1921 gaaggggaat tgatcgggga tgcattttat catgaaactg atgaaacgga cggcagtcgc
     1981 tcttttaagc gttgggccgt tcgccttctc gggaggcact tacgcagcga cgttgaacca
     2041 gaatctcttc agcctccaag acctaccggt tgtggttgat ctggatggaa gtttgccggt
     2101 ccgtgccgtg gcgcggccgc agcttgaggc gcaggccaag accaaagccg cgcagcctgc
     2161 agcggcgatc acgcctgcgc cctcgaccgc cgacatcgtg aacaagttgc tgagccccgg
     2221 cccatcggac ccgactgtgc cgctgcctcg tgctgacctc gccggggaga gcgtccaatc
     2281 cgggtcatcc aagaaaccgc agatcttcgg tcgcggcgaa gatggcggtg gcgttttcgg
     2341 cctccgggtg cccattccag ccgaccgaaa tacatcgggc tccaacacaa gatatagtcc
     2401 ccgctgaacg ggcctgaagg cggcccgaca gacgcgctga aacggactgt tgcacctggg
     2461 ccacaggttg tcatcgagtc gccgcgtatt ggccgctttc cttgcacctc acaagttgtg
     2521 gtgtgtatag tcccgtcgga gttggtgatt ggcccagccc cgccgacgct cgtcaggttc
     2581 gataaacgag gggaactact catgaaaaag gctttgatgg ccgccgctgc gctggttgcg
     2641 ctgccggtca tggctcaggc gcagtctccg tcgccgggcg tctacatcgg tgcggaaggc
     2701 ggtgcgaact ggcttctgaa cactaccatc ggtggcttcg gcgtcacgcc gcagaccggt
     2761 tgggcggcgg gcggtgtgat cggctacgat ttcgtcggtc cgcgcgtcga gttggaaggc
     2821 gtctatcgca acaaccagac caacactggc ccgttcggca cggcggtagc gactcaggtc
     2881 ggccagctcg gcatcttggc caacctgctc tacgacttca tgcctgcctc gatcatcacg
     2941 ccgtacatcg gcgccggtgc cggcgtgggc ttcgtcgaca gcaacgcctc gctcggcagc
     3001 acagtgttcg cctaccaggg catcatcggc ctgggctgga acgtcgacac caacttccgc
     3061 gtgaatatcg acggccgcta ctacggcacg tcgaacccga cggtgaacgg cagcggctgg
     3121 tcgaacaaca acttcagcgt catgctcggc ctgcagttga agttcggtgc cgtcgcaccg
     3181 ccgccgccgc cgccgccgcc ggcggttgcc ccgccgtcgt tcatggtgtt cttcgactgg
     3241 gaccgctcga acctgtcgca gcaggctctg gtcacgatca agcaggccgc cggggcgttc
     3301 aagtccaagg gcagcgcccg catcacggcg accggccata ccgacacgtc gggcccggaa
     3361 gcctacaaca tggcgctgtc gctgcgtcgt gccaatgcgg tcaaggacgc gctggtgcgt
     3421 gagggcgtgc cggcccaggc gatcacggtt atcggcaggg gcgagtccca gctgctggtg
     3481 ccgaccgccg acggcgtgcg cgagccgcag aaccgccgcg tcgagatcgt catccagtaa
     3541 gacgatccga agcttaagac ttccagggac ggccgggctc agcccggccg tttccttttt
     3601 cgggcccagt cattacttca gatagggcga gatagggcgc ttttcgggtt ggcgggcgca
     3661 agggcggcct ctatatccgg gcgaggagaa tgaattcatg tcgcaagtgt tgatgcccaa
     3721 ggcgaccgcc gtctggctgg tcgagaatac gaccctgacc ttcgatcaga tctcggcctt
     3781 caccggcctg catccgctcg aggtccaggc gatcgccgac ggggaagttg caggcggcat
     3841 gacaggtctt gatccgacga ccaacggcca gctcaccaag gacgagatca agcgcgtcga
     3901 ggccgacccg gcggcgcgcc tgaaactcag cccgcgcgac ataccccagc ccgtggcccg
     3961 ctccaagggc ccgcgctaca cgccggtcgc caagcgccag gaccgtcccg acgccatcgc
     4021 ctggctgttg aaagtccacc ccgagttgca agactcgcag gtcgccaagc tggtcggctc
     4081 gaccaagagc accgtccagt cggtgcgcga ccgcacccac tggaacatgc agaacgtgcg
     4141 gccgcgcgat ccggtgaccc tcggcctgtg ctcactgaag gacctcaacg acgccgtcga
     4201 caaggcgcgc cgcaaggccg cccgcgagga cgccgccaag aagaaggcgg cggccaaggc
     4261 ggcagcgccg gagcagccgg cggcggccga tcaggccgcc gatcccgccg aagccgacca
     4321 gcccgacctc ggcgagactc gccacaactg acggggctta gaccgtcagc atgatcttgc
     4381 cgacgtggtc ggcacgctcc agttcggcat gcgcgccggc ggcgtccttg agcgggaagg
     4441 tcttgtagat gatcggcttg accttgcccg cctcgagcaa cggccagacc ttgtccttga
     4501 ggccgcgcgc catgcggccc ttgttctcga cgctctgcgg ccgcagcgtc gagccggtga
     4561 gcgtgagccg gttcaccatc acgacggcgg cgctgatcgt cgccatggcg ccgagctgga
     4621 cggcgatgac gacgcagcgg ccatcctgct tcaggagctg aaggttcttc ggcaggtaat
     4681 cgcccgccac catgtcgagc acgacgtcga cgccgccgcc gagcttctgc acttcggccg
     4741 cccagtcatt gtccttgtag aggatggcgt ggtcggcgcc gagggcgcgc accgccttgg
     4801 ccttgccttc gttgcgcacc gtcgtgaaca ccgtggcgcc gaacgccttg gcgagctgga
     4861 tcgccgcggt accgatgccg ctggcgccgc catggatcag cgcgctttcg cctgacttga
     4921 gcgcgccgcg ctcgaagagg ttgtgccaga cggtgaagta gttttccggc agcgccgccg
     4981 cgcgcagcat gtcgaagcct ttcggcacgg ctaggcattg cggcgccggc gcagtgcagt
     5041 actcggcata ggcgccaccg ggcgtaagcg cgcaaattgc atcgcccact ttccagtccg
     5101 tgacccccgc gcccagcgcc gccaccgtgc cggcggcctc gaggcccggc aggtccgacg
     5161 cgcccggcgg cggcggatag tggccggcgc gctgggcgat gtcgggacga ttgacgcccg
     5221 ccgcggcgac cctgatcagg atttcgccgg ccatgggctg cggcaccggc cgcgtcgccg
     5281 gcaccaatgc ttcgggacct cccggcttct tgatctcgac acagctcatc gatgcgggaa
     5341 gtgcgctcat ggtcggcctt tcgaagcgat gggagcaatg ctaggtctcc cttagccgct
     5401 tccgtggagt cgcgccatgg cctttgacct cgacgatctc gatccccgac agaagaagac
     5461 ccagccgaag aatctcgacg ccatgaacgt cgaggatctc aaggagtatg tcgctgtgct
     5521 gaaggccgag ctcgccaggg tcgaggaaaa gatcaaagcc aagcagagtc acgccgcggc
     5581 ggccgcgacg ctgttcaaga ggtgagagcg cagtggccga cgcaaagttt ctgaaacccg
     5641 acacgttggc gctgcacgcc ggtcagcatc ccgacccggc gaccggtgcg cgggcggtgc
     5701 cgatctatca gacgacgtcc tacgtgttcc gcgacgtcga tcacgccgcg agcctgttca
     5761 acctcgaggt cggcggccac atctatagcc gcatctccaa cccgacggtc gccgtgttcg
     5821 aggagcgggt ggcggcgctg gaggagggct cgggcgcgtt gggcgttgcc agcggccagt
     5881 cggcgctgca catcgccatc gccaccctga tgggcgctgg cggccacatc gtcgcctcga
     5941 cctcgctcta cggcggcacg cgcaacatgc tgggcctgac attgccgcgc ttcggcatcg
     6001 agacgacctt cgtcaatccg cgcgaccacg acgggttcgc caaggccatc aggcccgaga
     6061 cccggctggt gctgggcgag accatcggca atcccggcgg cgaggtttta gacattccgg
     6121 ccatcgccga catcgcccac caggcgaaga tcccgctgat gatcgacaac accttcgcct
     6181 cgccggtgct ctgccgcccc ctgaccctgg gcgccgacat cgtgttccat tcggccacca
     6241 agttcatcgg cggccatggc gtggcaatcg gcggcgtcat cgtcgagggg ggccgcttcg
     6301 actgggaagg ttcgggcaag ttcccgaccc tcaccgagcc ctatgccggc tatcacggca
     6361 tcgacttcgc cgaggagttc ggcccgcacg ctttcatcat gcgcgcccgc accgagggcg
     6421 tgcgcgactt cggctcctgc atggcgccgc agaccgcgtt ctatctgctg caagggctcg
     6481 agacgctgcc gctgcgcatg gcacgccatg tcgagaacgc gcgcaaggtc atcggcttcc
     6541 tcaaggccaa tccggccgtc gagcgcatcg cctcgccgga attggccgac catcccgacc
     6601 atgcgctggc taaaaaactg ctgcccaagg gcgccggctc gatcttcagc ttcgacatca
     6661 agggcggccg cgaggccggc cggcgcttca tcgagcggct aagactcttt tcgcaccttg
     6721 ccaatgtcgg cgacgccaag tcgctggtca tccatcccgc ttcgaccacc catgcccagc
     6781 tcgacgcggc ggcgctcaag gaagccggca taggcgaagg catgatccgc ctctcggtcg
     6841 gcctggaaga tcccggcgat cttttggacg acctcggcca ggcgctgcgc gccgcggcca
     6901 agggctgacc atggagctta gcgtcgacgg ccgcgccgtc tttgcgacga ccggcggcac
     6961 cgacttcgat ccggccaagc cggctgtcgt gttcctccac ggcgcgggct tcgatcgtac
     7021 cgcgtggcgc ctgcagacgc gctggttcgc ccatcacggg cgcagcgtgc tggcgatcga
     7081 ttttccggcg catggccggt ccgcgggacc ggcgctcgag agcatcgccg ccatggctga
     7141 gtggaccgcg gcgttgatcg aggcggcggg actcaaaaat gcggcgctgg tcggacactc
     7201 gatgggcggc ctggtcgcga tcgaaacggc ggcgcgcttc cccgacaagg tgcgcgcgct
     7261 tggcctttgt ggcgtggcgg ccgagatgcc ggtgcatccc gagatgctgg aatcggccaa
     7321 ggcggacacg ctcaaggtcc aggagttgat gaccttctgg ggcatgggca atgccctgca
     7381 taaaggcggc atggtctcgc ccggcctgtg gttgcggcgc gaatcgctgg ccgtgctctc
     7441 gggcaaccga gccggcgtga tccacgccga tctcgccgcc tgcaacgcct acaaggatgc
     7501 gctcgcccgc gccgccgcaa tcaggtgccc gaccgtgctg gtgctgggcg acggcgatct
     7561 catgaccccg gccgccaagg ccaagccatt ggccgccgcc atcgccggat cgcgcaccgt
     7621 ggtgatcgcc aattccgggc acttcatgat ggtggagcgg ccggacgaga cgctggaggc
     7681 gttgaaggaa ggtgtctgaa agagtggcgc tcgtcaccgg ctcgacatcg ggcatcggtg
     7741 cggccacggc gcgccgactg gtgcgcgacg gctataaggt cgccctgcat tcgcggcgct
     7801 cggccgatgt cggtcgcgcc atggccgccg aattgccggc cgccagctac catcaggccg
     7861 acctgggcga tgaggcggcc acgcgcggtc tggtcgccgc cgtcgtgaag cagcacggcc
     7921 ggctcgacgt gctgatcaac aatgccggcg aatcgatccg catcccgcat ggcgacctca
     7981 aggcggcgac gcccgcggtg tggcggcgca tgctcgatat caacctgatc gcgccgttcg
     8041 tgctgactgc tgaagccgag ccggcgctgc ggcaatcggc cgagggcgga cggccggcct
     8101 gcatcgtcat tatcggcacg cattccagag tgcggcccaa gggcgcctcc atcccttacg
     8161 ccacggccaa ggccggcctg caccatgcca cgcgcctgct ggcgctggcg ctcgggccgg
     8221 ccatccgcgt caattgcgtg gcgcccggcc tggtcgagac gccgatgggc gccggctggc
     8281 ccgaggcgac cgagctgtgg aacaccaaag cgccgatgcg ccgtccggcg cggcccgagg
     8341 acatcgccga tctggtggcc gcgctggtcg ccaacgacta cgttacggga gagatcgtca
     8401 tcgccgatgg tgggttgaac ctcacctagc cacacggagg aagccatgaa cgtccagacc
     8461 ctgccgccgg gctacaagac cgcgccatgg acgccgccgg acaagatcac cggcgccatg
     8521 ctctcggaag caagcaccaa gctgatcgac cttttgcgaa tccgcaccca gccgatcggc
     8581 atgaggctgt tcgaagatgc cgctgacatg gagaaaatcc agggcgtgcg caagccgacc
     8641 gagggcttca agttcaccat gtgccagatg gtgacgcagt cgcgctggta cggctttacg
     8701 ctcggcatca ccgtcgacaa tacgcgcggc ggcaattgcg gcggcgtggt cgggctcaac
     8761 catcccggcg agggcttcct gtcgggcgat cacatgaacg gcgtgtggtt cggcaacaag
     8821 gaagcgtcgg cggcgcacca ggcgcagatg ccgcgggtgc ccgacggcaa atacaacggc
     8881 ctggtcgtcg cgccattgcg ctcggcacgg ctcgatccgc ccgacatctg cctgttctac
     8941 ggcacacccg gccagatgat ctatttcatc aacggcctgc agttccaccg ctaccgccgc
     9001 tacgacttca cggtgaccgg cgaaagcgcc tgcgccgatt cgtggggcag agcgctggcg
     9061 acgcggcaga cctcgctgtc gctgccctgc tatgccgagc gccgctacgg tggcgtggcc
     9121 gacgacgagc tcttgatggc ctgcccgccc gatgagtttt tgcgcgccat cgagggcatg
     9181 ggccatctcg gcaagaacgg gctgcgctat ccgttcccgc cgtacggcgc ggcgatggat
     9241 ccgtccttcg gcatggccaa aagctacggc tgacatgctc tatgtcgtgg cctggccggt
     9301 cctggcggag gccgacgaca ccgcgctgcg ccgcctcagg gcacagtacc atcccggcga
     9361 ggccgacctg atcggcccgc atttcaccct ggtcttcggc actgacgcgc accacgagac
     9421 gcggctgcgc ggcctcctcg acacgctcgc cggtcggcgc cccttctggt tcgtgctcga
     9481 tcgcttggtg cggcatgacc tgacgccgcc ctcgcgctcg gcctatcttt atgcggtgcc
     9541 cgccgacggc ggcgccgaac tcacaagcct ccacgacgag ctcaacccgg cgccgggccc
     9601 tgaaccattc gaaccgcaca tcacgcttgg tctgttcgag cgcgctgccg acgccgagca
     9661 ggtggcacgc atcgtcgagc gccagcactt gcccatgcac ggccggatcg aggagctggc
     9721 gctgttgcgc cgcaatggtg atgcgcttga agcgttgaag agcgtccgcc tctagtgcca
     9781 aagcggcgcc aatggcggca ggcgtacatt gcccggccgg ccgacgatgc cgaaccgcgc
     9841 cagcgtctcg cgcacctcgc gtggtgcgcg cagggtcggg gtttcggcgt cgaggccggc
     9901 cagccgcagg aggcggtcca gcatcttctg ccagcgctcg gattcgggcg gaaaatggcg
     9961 gatctcgatc tgccgcgatt cttcgatgtt ggccttggcc ttggcgatat tgagcgcaag
    10021 ctgcagcccg cccaactcat cgatcaggcc ggccttcttg gcgtcattgc cggagaagac
    10081 gcggccgcgc gccgctgcat cgagtttggc gccgtcgagc ttgcgcgcct cgccgacctg
    10141 gcgggtgaat tcggcataga tcgtgtcgag ctcgcgcgag acggcggcgc gctgcgtcgg
    10201 cgtcggcgcc tggaaggtcg aatacatgcc ggcattggtg ccgaccgcca gccgctcgac
    10261 ccggatgccg agagtcgtga gcagctcgga ggcgaccggc cagatgccga acacgccgat
    10321 cgatgcggtg atggtggtgg gctgggccac gatcacgtcg ccgcgcacgg cggcgagata
    10381 gccgcccgac gccgccacgt cgcccatcga gacaatcacc ggcttgccgg ccgcgcgggc
    10441 gcgaccgacg gcgtcggcga tggcgtcggc ggcggggtag gtgccgccgg gtgaatcgat
    10501 gcgcaggacg atggcgcgca cgtccttggc gcgggtcgcc tggtcgagcg cgtcgaccac
    10561 atcctcggcc cgcgccacgt tgtcgtcatc cagcgcgccg ccgccgcccg gccccgacat
    10621 gatggcgcct ctgacccgga ccatgcccac gacctcgccg tgcggcttcg atcgcccttc
    10681 gtcggcggca tagtccgaca acgacgtgag atcgcggacc ttgccggtac gcgtccggac
    10741 ttcgtccagc gcgtcgctgc gatagccgat cttgtcgatc aggttctcct gccgtgcccg
    10801 ctccggctcg aacggcactg aatcgatcaa ttggcgcagc ttggcgggct cgatgtgacg
    10861 ctcgcgcgcc acgtcgctga cgaactggct gtagaggctg tcgaggagtt gctgcaggtt
    10921 ttcgcgggcc ggcccggtgt agccggtctc caggaagctg tcgggcgcgc tcttgtactg
    10981 gtagcgcttg ccgccctcga cctgcacgcc gagcttgtcc agcccggcct tcaggaacgg
    11041 cgtttcgatc gcaatgccgg ccaccgcgaa gccgccgctc ggctgcagcc agacctgctc
    11101 cagcgccgag gcgaggtagt agtcggagaa gtgcgcgccg ccgctgccca gcgattcggc
    11161 gaagccgatc gcgaacttgc ccttgccgcg aaaatgggcg atcgcctggc gcagctcctg
    11221 gacgcgggcg agaccggccg attcatcgcc gatgtcgacg aacagtccga ccaccctcgg
    11281 atcgtcggcg gcctgccaca gcagctggac ggtatcgagg atgtcacgcg agccgcgcaa
    11341 caatccgccg cgcaacagat tgccggagga cgtttccggc ggcacgtcgc gcaggtcgac
    11401 ggacagcacg atgggcttgg tcagcggctt gttcgagaac gggctcgacg cgaccacggc
    11461 gacgagtccg ccgaccgcga gcagggtgag ggtgccgacg gtcgcaagca gaccaacgat
    11521 aaatcgccgc atggcgagtc tccgttcagt ttctaggatt tgacgagatt cggccggaac
    11581 gccttcacgg cgtcaagcat cgccgacgca gagatgtcga gcccattgtc gcgtaccagc
    11641 acggcgctcg gcaggccgcg aatcgggcgc aggccgtcgt cgaaattcca catcgacagg
    11701 cgaagattgg cggccatgaa gacctgcgag gcgatgccga cttcgagctg cggccgcagc
    11761 gccagccggc gcaagcgtac ccattcgata tcgtcccagg tgaagcggcg gtcgcgaccg
    11821 aatcccaacc cgatgccgtc gcggtcgatg acgacctggg gctggcggtt gagggtgcgg
    11881 ctgacgccga cgaacacgta atagcccatc gccgcggcaa gcatggcaaa cagcacgaag
    11941 cgcggatcgt tcagcgacag gctgggcgca ttggcagggt tgttggcgaa gtgcaggatt
    12001 gccgcgccga tcatgacggc cgagacgacc gccatgccga gattgtgcag cctgccgtag
    12061 cgcgcctcga cgccgcggct ggccattgcc tggatcagcc gcactgcgca cggtggcgca
    12121 gcagatgatc ggccagcacg caggccacca tcgcctcggc caccggcgtg gcgcggatgc
    12181 cgacgcaggg atcgtggcgg cccttggtgc gcaattcgac ctcgttgccg aagcggtcga
    12241 tgctgcgcac gggggcgagg atcgagctgg tgggcttcac caccagccgg cagacgatgt
    12301 cctggccgct cgagatgccg cctaaaatgc cgccggcatg gttgctgagg aaaacgggcg
    12361 cgccatcctt gatgcgcatc tcgtcggcat tctcctcgcc gctcatggca gcggcgacga
    12421 aaccgtcacc gacctccacg cccttcacgg cattgatgct catcagcgcc ttggcgaggt
    12481 cggcatcgag cttgtcgtag accggatcgc ccaagccgac cgccacgccc gaggccacga
    12541 cctcgatcac cgcgccgcac gagctgccgc gcttgcgcac gtcgtcgaga tagccctccc
    12601 agccctgagc ggcctgacgg tcggggcacc agaagggatt gtcggccgtg gcggcccagt
    12661 cccacttggc gcggtcgatc ttttggctgc cgagctgcac cacggcgccg cggatgctga
    12721 cggcatcgcc caggatcttg cgggcgatcg cgcccgcggc cacgcgcacc gcggtctcgc
    12781 gcgccgactg gcggccgccg ccgcgatagt cgcgcacgcc atatttcttg aagtaggtgt
    12841 agtcggcgtg ggcggggcgg aacttgtcct tgatctccga atagtcgcgc gagcgctgat
    12901 cgacattgcc gatatgcaga gcaatcggcg tgcccgtcgt gacgccctcg aacacgccgg
    12961 acaggatttt aaccgtgtcg ggctcctggc gctgggtgac gaaacgcgac tggccgggcc
    13021 ggcgcttttc catccacacc tggatatcgg cctcgctgag cgggatgcgc ggcggcgtgc
    13081 cgtcgaccac gcagccgatc gccggtccgt ggctttcgcc ccagctggtg aaccggaaga
    13141 gggtgccgaa gctgttgccg gccatgccgg cctccgcctt actcgccctc gaaattgccg
    13201 agcagttcgg cgatctgctt ggccgacgag gtcttgatca tgccgacgat atggtagccg
    13261 ccatcgacat gcatcacttc gccggttacg gcggtgccga gatctgacag aaggtagagg
    13321 ccggcattgc cgacttcctc ggccgtgatg ttgcgcttga gcggcgagtt gagttcgttc
    13381 cacttcagta tatagcgccc gtcgttgatg ccggcgaaag ccagcgtctt gatcgggccg
    13441 gcggagatgg cgttgaccct gatcttctgc tcgccgagat cggccgccag atagcgcacg
    13501 ctcgcctcga gggcagcctt ggccacgccc atgacgttgt aatgcgggat cacccgttcg
    13561 gcgccgtagt aggtgagggt gagcaggctg ccgccgttct tcatcagggg cacggcgcgc
    13621 tgcgctaccg cggtgaagga gaagcagctc acattcatgg tgagttcgaa gttctcgggc
    13681 gaggtgtcga tataccgtcc gcgcagctcg tccttgttgg aaaaggcgat ggcatggacc
    13741 aggaaatcga gctcgcccca gctcttgccg atctcggaga aggtggcgtc gatgctggcc
    13801 gcgttggtga cgtcgcaggg cacgatgatc ttggcgccga tcgaattggc caacgggcgc
    13861 acccgcttct ccagggcctc gccctggaag gtgaaagcca cctcggcccc atgttcgtgg
    13921 caggccttgg cgatccccca ggcgatcgag cgctcgttgg cgacgcccat gacgaggccc
    13981 tttttcccgg ccatcaactg tccagcaacg gtcatggatc gttcttagcg ggcatagcct
    14041 attgggacaa gatgccggtg gtctggccgc ccacagcccc tcatattgtg gtcatgattg
    14101 gggaaaagtc cgatccgctg gcgcttttcg gcgaatggta cgaggcggct gccaagaacg
    14161 agcccaacga accctcggcc atggggctcg ccacggtcgc gcccgacggc atgccctcgg
    14221 tccgcatggt gctcctgaag ggctacgacg cagcgggttt cgtcttctac accaacacgg
    14281 aaagccgcaa gggcctgcac ctgcgggacc atcccaaggc ggcgctgctg tttcactgga
    14341 agtcgctgcg ccgacaggtc cgcctcgaag gtccggtgtc gccggtcaca tccgaagagg
    14401 ccgacgccta tttcgcgacc cgcgcccgcg gcagccagat cgg
//
LOCUS       DASWGA010000145         3497 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_903979, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000145 DASWGA010000000
VERSION     DASWGA010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3497
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_903979"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(192..668)
                     /locus_tag="VF991_03580"
     CDS             complement(192..668)
                     /locus_tag="VF991_03580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555549.1"
                     /translation="MTRMMGSVLTSRASTVFIDLVVIALIVLSLIELVWDAVARPTHT
                     EAKQIIAGVSVVMIGWGVALEERQEVRELFGLKGGSNDGWQDQVDRTCKGAGIALLLS
                     GLFAEICEQLITLPRSVFSTESIRSVLLALGMLCLLVGLIILVRHVIHLVMLKHTE"
     gene            complement(752..1849)
                     /gene="ychF"
                     /locus_tag="VF991_03585"
     CDS             complement(752..1849)
                     /gene="ychF"
                     /locus_tag="VF991_03585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEX9555550.1"
                     /translation="MGFNCGIVGLPNVGKSTLFNALTATQAAQAANYPFCTIEPNVGR
                     VAVPDPRLDKLAAIASSANVVNTQLEFVDIAGLVRGASKGEGLGNQFLANIREVDAVA
                     HVLRCFEDSDVTHVSGSVDPARDAEIVETELMLADLDSLEKRLPGLEKRAKGGDKDAQ
                     AELPVVNKALDALRDGKPAREAAITTEERPLFRLMQLIPAKPMMYVLNVEEASVATGN
                     AHSAKAEEHAKQRGVPAVVISAAIEAEVAQLPPQDQAEYLAHLGLKETGLARVLRAGY
                     LLLDLVTFFTVGPKEAHAWTVRRDAKAPEAAGVIHTDFEKGFIRAETIAYDDYVALNG
                     ETGARDAGKLRLEGKDYAVNDGDVFHFRFNV"
     gene            complement(1851..2471)
                     /gene="pth"
                     /locus_tag="VF991_03590"
     CDS             complement(1851..2471)
                     /gene="pth"
                     /locus_tag="VF991_03590"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEX9555551.1"
                     /translation="MLLLVGLGNPGPRYAGHRHNVGFMAVDEIVRRRVFSPWRARFNG
                     EVAEGHLGGERTLVLKPMTFMNESSKSVGEAVRFLKVPLDRVVIFHDELDLAPGRVRM
                     KKGGGAGGHNGLRDIDAHLGNDYRRVRIGIGHPGHKELVLHWVLRDFEPDERDAKDGW
                     VPKVLGALADEAPLLVEGTGKGDERYMSRVAHLAPPPKPPVEESKA"
     gene            complement(2499..3311)
                     /locus_tag="VF991_03595"
     CDS             complement(2499..3311)
                     /locus_tag="VF991_03595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEX9555552.1"
                     /translation="MAETTKVVAKKRDRAGKGGARSSRRDGLIPAVIYGDKQPPMSIA
                     VEPKSIERELHSEGFFNHRLQIDVEGTDYDVLPRDVQVDPVTDKPLHLDFLRIGPDSI
                     ITVQVPVHFKNESQAPGIKRGGVLNVVLHEITVRTKPDAIPEYFEVDLTGLEIGHSVH
                     LASLPIPEGVRVVSRDKNATVASIAAPTVVREAAAAAAAEAAAAALAPPPPEGAAPAA
                     PGAAPAAPGAAPAAGAAAPATGAAPAAPAASAAGGKAPAPAAGGKAPAPAKK"
     gene            complement(3398..>3497)
                     /locus_tag="VF991_03600"
     CDS             complement(3398..>3497)
                     /locus_tag="VF991_03600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosylpyrophosphate synthetase"
                     /protein_id="HEX9555553.1"
                     /translation="VSPNVRPISIASLMAEAMKRISEETSVSSLFD"
BASE COUNT          540 a         1177 c         1163 g          617 t
ORIGIN      
        1 ttctcgccca ccaggttgcc acctggccag cgatcagcac gatcttgccc ctggtcactt
       61 gcgcgatctg cgaatagctg gtgggcggcg gcatggtctt ggggctggag agggtgacgg
      121 tcatgcgcca ctcctgtcga gcacgaggcg gaaacgggat tgcggcgaca aacgcaatgc
      181 gtccggcatg gtcattccgt gtgcttcagc atgaccagat ggatcacgtg gcggaccaga
      241 atgatcaaac caacgaggag acagagcatc ccaagagcga gcaacacgct gcgaatgctt
      301 tcggtgctga agacgctcct cggcaacgtt atgagctgtt cgcagatctc ggcgaacaac
      361 ccggacagaa gcagcgcgat gccggcgcct ttgcatgtcc tatcgacctg gtcctgccat
      421 ccgtcgttgc ttccgccctt cagcccgaat aactcgcgca cctcttgccg ttcctcgagc
      481 gccacgcccc atccgatcat gacgacactg acgccggcga tgatttgctt tgcttcggtg
      541 tgggtgggac gcgcgacggc atcccacacc aattcgatga gcgacaacac gatcaaggcg
      601 atgacgacca gatcgatgaa caccgtcgaa gcgcgcgatg tcagcacgct ccccatcatg
      661 cgagtcattt ccagagcccc gcccgccgcg tggtttcgcc ggcactctgg cacaagacat
      721 cctggcccgc caattcagcg agcccggagc ctcagacgtt gaagcggaag tggaagacgt
      781 cgccgtcgtt gaccgcgtag tccttgcctt ccagccgcag cttgccggca tcgcgcgcgc
      841 ccgtctcgcc gttcagcgcg acgtagtcgt cgtaggcgat ggtttcggcc cggatgaagc
      901 ctttctcgaa atcggtatgg atgacgccgg cggcttccgg cgccttggcg tcgcgccgca
      961 ctgtccaggc atgcgcctcc ttcgggccga ccgtgaagaa ggtcacgaga tcgagcagca
     1021 gatagcccgc ccgcagcacg cgcgcgaggc cggtctcctt gaggcccagg tgagccaggt
     1081 actcggcctg gtcttggggt ggaagctgcg ccacctcggc ctcgatggcg gccgagatca
     1141 ccacggcggg cacgccgcgc tgcttggcat gctcttcggc cttggcactg tgggcgttgc
     1201 cggtggcaac cgaggcctcc tcgacgttca ggacgtacat catcggcttg gcggggatca
     1261 gctgcatcag ccggaagagc ggccgctcct cggtcgtgat cgccgcttcg cgggcgggct
     1321 tgccgtcacg caaggcgtcg agcgccttgt ttaccaccgg cagctcggcc tgggcgtcct
     1381 tgtcgccgcc cttggcgcgc ttctcgagtc cgggcaggcg cttctcgagg ctgtcgaggt
     1441 cggccagcat cagctcggtc tcgacgatct cggcgtcgcg cgccggatcg acgctgcccg
     1501 agacgtgggt gacgtctgaa tcctcgaagc agcgcagcac gtgggcgacg gcgtcgacct
     1561 cgcggatgtt ggcgaggaac tggttgccga ggccctcacc cttcgaggcg cccctgacca
     1621 ggcccgcaat gtcgacgaat tcgagctggg tgttgacgac gttggccgag ctcgcgatcg
     1681 ccgccagctt gtcgagccgc ggatcgggca cggcgacgcg gccgacgttg ggctcgatgg
     1741 tgcagaacgg atagttggcc gcctgcgccg cctgggtggc ggtgagcgcg ttgaacaggg
     1801 tcgacttgcc gacattgggc aggccgacga ttccgcagtt gaaacccatt ttacgctttc
     1861 gactcttcga ccggaggttt tggcggcggg gcgaggtggg ccacgcggct catatatcgt
     1921 tcgtcgcctt tgccggtgcc ttcgaccagc agcggcgctt cgtcggccag cgcgcccagg
     1981 accttgggca cccaaccatc cttggcatcg cgttcgtcgg gctcgaaatc gcgcagcacc
     2041 cagtgcagca ccagctcctt gtggccggga tggccgatgc cgatgcgcac gcggcgatag
     2101 tcgttgccga ggtgggcgtc gatgtcgcgc aggccgttat ggccgccggc gccgccgccc
     2161 ttcttcatgc gcacgcggcc cggcgcgagg tcgagctcgt cgtggaagat gacgacgcgg
     2221 tcgagcggca ccttcaggaa gcgcactgcc tcgccgaccg atttgctcga ttcgttcatg
     2281 aaggtcatgg gcttgaggac gagcgtgcgc tcgccgccga gatggccttc cgccacctcg
     2341 ccgttgaagc gcgcgcgcca gggcgagaag acacggcggc ggacgatctc gtccaccgcc
     2401 atgaatccga cattgtgccg gtgccccgcg tagcgcggcc cgggattgcc aaggccgacc
     2461 agcagcagca tgcgaagctc ggggcgcgaa cgccccgctt acttcttggc cggagccggc
     2521 gccttgccgc cggccgccgg agccggcgcc ttgccaccgg ccgccgacgc cgccggcgcc
     2581 gccggggcag cacctgtcgc cggcgctgcc gcgcccgctg ccggtgcggc gcccggcgcc
     2641 gctggagcgg cacccggcgc tgccggcgcc gcgccctcgg gcggaggcgg agccaacgcc
     2701 gctgccgccg cctcggctgc cgccgctgcc gccgcctcgc gcaccacggt gggcgcggcg
     2761 atcgaggcca cggtggcgtt cttgtcgcgg ctcaccacgc gcacgccctc ggggatcgga
     2821 agcgaggcca ggtggacgga gtggccgatc tcgaggccgg tcaggtcgac ctcgaaatat
     2881 tccgggatgg cgtcgggctt ggtgcgcacg gtgatctcgt gcagcacgac gttcagcacg
     2941 ccgccgcgct tgatgccggg cgcctgggac tcgttcttga agtggaccgg cacctgcacg
     3001 gtgatgatcg aatcgggccc gatgcgcagg aagtcgagat gcagaggctt gtccgtcacc
     3061 gggtcgacct gcacgtcgcg cggcaggaca tcatagtccg tgccctcgac gtcgatctgg
     3121 aggcggtggt tgaagaagcc ctcgctgtgc agctcgcgct cgatcgattt cggctcgacc
     3181 gcgatcgaca tggggggctg cttgtcgccg tagatcacgg cgggaatcag tccatcgcga
     3241 cggctggaac gggcgccccc tttgccggcc cggtcccgct tcttcgcgac gacctttgtc
     3301 gtctctgcca tttcaacttc tccttaaggt ttgctctttc tctctctcac tcgcgacgtg
     3361 gcctccaggg gtgcccaacg ccggatctcc aaaactccta atcaaacaaa ctcgagaccg
     3421 acgtctcctc ggagatgcgc ttcatcgcct cggccatcag cgaggcgatg ctgatcggtc
     3481 gcacgttagg cgacacg
//
LOCUS       DASWGA010000146         3827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2165385, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000146 DASWGA010000000
VERSION     DASWGA010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3827
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2165385"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VF991_03605"
     CDS             complement(<1..323)
                     /locus_tag="VF991_03605"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX9555554.1"
                     /translation="MKVGFIGVGNMGGPMCRNIVKRSNHQVTVFDLNPAAVKTCTDLG
                     ATAAKSVAEVTRGADVVMTSLPMPRDVEAVTLGGNGILATIAKGQTYIDLSTNAPSMV
                     KKIGAA"
     gene            442..3606
                     /locus_tag="VF991_03610"
     CDS             442..3606
                     /locus_tag="VF991_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX9555555.1"
                     /translation="MARNKLHPIPHPPRTPVLGNMLTVDGDAPIQGLMRIAREQGPIF
                     WLDMMGTPLVVVSGADLVAELCDEKRFDKAVRGSLRRVRMLGGDALFTAETQEPNWQK
                     AHNILLPTFAHRMMQTYHDGMLDIAEQLVTKWERLNADEEIDVVRDMTALTLDTIGLC
                     GFNYRFNSFYRSDNHPYVESLVRALEAVMKMRGLPLEDITQRKSRKKLELDVGFMNGI
                     ADRIIRERREVPAGDEAKPDLLGYMLSGVDKQSGERLDDVNIRYQMNTFLIAGHETTS
                     GMLSFAVYFLLNNPHVLQKAYEEADRVLGRDVNARPTAQQVNQLVYIGQILKESLRLW
                     PTAPAFGLYPYQHETIGGKYKLRKRTFVTVLTAMLHRDKSVWGPQAEVFNPDSFAPER
                     ETKMPPHAYKPFGNGQRACIGRQFAMTEATLVLGLILQRFRLVDHTRYQLKIKESLTI
                     KPEGLVMRVRLRPDIVRGSGVSAAKPEPKKARPKKAAASHGTPLAVLFGSNMGTAEEL
                     ARSIAEAGEAQGFATTLGSLDDLAGKLPAEGAVAIVCASYNGGPPDNAGHFIESLRAA
                     APGSLTGVRYTVFGCGNRDWASTYQAIPRRIDELLAEKGAERIYARGEGDAREDLDGH
                     FQAWTEPLLPALADKLGVKLEPDQGVAAEPLYRVQAVDKPPANPIIGGSGALPMRVLA
                     NRELQVADKSGRSTRHIEVMLPDGVGYRAGDHLSIVPQNGAALVERATRRFGFVPGAH
                     VMLAAAEGRRAALPVGEAIAVHRLLSDFVELQHPATRKQIQAMAQHTRCPFTRPKLEA
                     LLDEEQFKAEVLAKRKSVLDLLDEHPACELPFAGFLEMLPLMTPRYYSISSSPIADGT
                     RCSITVAVVEGPARSGAGVYHGVCSSHLARQAAGGTVQAFVKETKVGFRLPVDPAAPI
                     VMIGPGTGLAPFRGFLRERAALKAQGRQLGPAMLFFGCRHPEHDFLYADELRRHADAG
                     VVDLHVAFSRHDGKKIYVQDLLKDQADRVRVLIEQGAIVYVCGDGGRMEPDVKRALAA
                     MYDEAWVAKLAADNRYVLDVWASS"
     gene            3591..>3827
                     /locus_tag="VF991_03615"
     CDS             3591..>3827
                     /locus_tag="VF991_03615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 family protein"
                     /protein_id="HEX9555556.1"
                     /translation="MGQQLNRELERDRARARDLRRIKRVATALLIFTASLFIVARHFE
                     PTHWAWSYVAAFAAAATVGGLADWYAVVALFRRPL"
BASE COUNT          620 a         1311 c         1290 g          606 t
ORIGIN      
        1 gcggcgccga tcttcttcac catcgagggc gcgttggtgc tgagatcgat gtaggtctgg
       61 cccttggcga tggtggcgag gatgccgtta ccgcccaggg tcaccgcctc gacgtccctg
      121 ggcatgggca gcgaggtcat caccacgtcg gcgccccggg tgacctcggc caccgacttg
      181 gcggcggttg cgccgagatc ggtgcaggtc ttcaccgcgg cagggttcag gtcgaacacc
      241 gtcacctggt ggttgctgcg cttgacgatg ttgcggcaca tgggtccgcc catgttgccg
      301 acgccaatga atccgacctt cattgtttcc tccccgggag aatgtgacgg tcgactatac
      361 gacagaatcg ccgtgcccac tgtttcgcct cgcggcgcgg cggggcaata tggacgacag
      421 acagggagga cggccgagct catggcgcgc aacaagctgc atccgattcc gcatccgccg
      481 cgcacgccgg tgctgggcaa catgctcacc gtcgatggcg acgcgccgat ccagggcctg
      541 atgcggatcg cccgcgagca gggcccgatc ttctggctcg acatgatggg cacgccgctg
      601 gtcgtggtgt cgggcgccga cctggtggcc gagctgtgcg acgagaagcg cttcgacaag
      661 gcggtgcgcg gctcgctgcg ccgggtgcgc atgctgggcg gcgacgccct gttcaccgcc
      721 gagacccagg agcccaactg gcagaaggcg cacaacatcc tgctgccgac cttcgcgcac
      781 cgtatgatgc agacctatca cgacggcatg ctcgacatcg ccgagcagct ggtgaccaag
      841 tgggagcggc tgaacgccga cgaggagatc gacgtggtgc gcgacatgac cgcgctcacc
      901 ctcgacacga tcggcctgtg cggcttcaac taccgcttca actcgttcta ccgcagcgac
      961 aaccatccct acgtcgaatc cctggtcagg gcgctcgaag cggtgatgaa gatgcgcggc
     1021 ctgccgctcg aggacatcac ccagcgcaag agccgcaaga agctcgagct ggatgtcggc
     1081 ttcatgaacg gcatcgccga ccgcatcatc cgcgagcgcc gcgaggtgcc cgccggcgat
     1141 gaagccaagc ccgacctctt gggctacatg ctgagcggcg tcgacaagca gagcggcgag
     1201 cggctggacg acgtcaacat ccgctaccag atgaacacct tcctgattgc ggggcacgag
     1261 accacgagcg gcatgctgtc gttcgcggtc tatttcctgc tcaacaatcc gcacgtcctg
     1321 cagaaggcct atgaggaagc cgaccgcgtg ctgggccgcg acgtcaacgc gcgacccacc
     1381 gcccagcagg tcaaccagct cgtctatatc ggccagatcc tgaaggagtc gctcaggctg
     1441 tggccgaccg cgccggcctt cgggctctat ccctatcagc acgagacgat cggcgggaaa
     1501 tacaagctgc gcaagcgcac cttcgtcacc gtgctgacgg cgatgctgca tcgcgacaag
     1561 tcggtgtggg gaccgcaggc cgaggtgttc aatcccgaca gtttcgcgcc cgagcgcgag
     1621 accaagatgc cgccgcatgc ctacaagccg ttcggcaacg gccagcgcgc ctgcatcggc
     1681 cggcagttcg ccatgaccga agcgacgctg gtgctcggcc tgatcctgca gcgcttccgg
     1741 ctggtcgacc acacgcgcta ccagctcaag atcaaggagt cgctcaccat caagcccgag
     1801 gggctggtga tgcgcgtgcg attgcggccc gacatcgtgc ggggctcggg tgtttccgcc
     1861 gccaagcccg agcctaagaa ggcccggccg aagaaggcgg cggcgagcca cggcacgccg
     1921 ctcgcggtgc tgttcggctc caacatgggc accgccgagg agctggcgcg ctcgatcgcc
     1981 gaagcgggcg aggcgcaggg tttcgccacc acgctcggga gcctcgacga cctggccggc
     2041 aagctgccgg ccgagggcgc ggtagcgatc gtctgcgcgt cctacaatgg cgggccgccc
     2101 gacaacgccg gccatttcat cgagagcctg cgtgcggcgg cgcccggatc gttgaccggc
     2161 gtgcgttaca ccgtgttcgg ctgcggcaat cgcgactggg cttcgaccta ccaggcgatc
     2221 ccgcgccgca tcgacgagct tttggccgag aagggtgccg agcggatcta tgcccgtggc
     2281 gagggcgacg cccgggaaga tctcgacggc cacttccagg cgtggaccga accgttgctg
     2341 cctgcgctgg ccgacaagct cggcgtcaag ctcgagcccg accagggcgt cgccgccgag
     2401 ccgctctacc gggtgcaggc ggtcgacaag ccgccggcca atcccatcat cggtggcagc
     2461 ggcgcgctgc cgatgcgcgt gctcgccaac cgcgagctgc aggttgccga caaatcgggg
     2521 cgcagcacgc gtcatatcga ggtcatgctg cccgacggcg tcggctatcg cgccggtgac
     2581 catctcagca tcgtgccgca gaacggcgcg gcgctggtcg agcgcgcgac ccgccgcttc
     2641 ggcttcgtgc ccggcgcgca tgtcatgctg gccgccgccg agggcaggcg cgcggcgctg
     2701 ccggtcggcg aggcgatcgc cgtccatcgc ctgctgtcgg acttcgtcga gctgcagcat
     2761 ccggcgacgc gcaagcagat ccaggccatg gcgcagcaca cacgctgtcc gttcacgcgg
     2821 cccaagctcg aggcgctttt ggacgaggag caattcaagg ccgaggtcct ggccaagcgc
     2881 aagtcggtgc tcgacctcct ggacgagcat ccggcgtgcg agttgccgtt cgccggcttc
     2941 ctcgaaatgc tgccgctgat gacgccgcgc tactactcga tctcgtcctc gccgatcgcc
     3001 gacggcacgc gctgctcgat caccgtcgcc gtggtcgaag gaccggcccg ctcgggcgcc
     3061 ggcgtctatc acggcgtctg ctccagccac ctggcgcgcc aggcggccgg cggcacggtg
     3121 caggccttcg tcaaggagac caaggtcggc ttccggctgc cggtcgatcc cgcggcgccg
     3181 atcgtcatga tcggcccggg caccgggctg gcgccattcc gcggtttcct gcgcgaacgc
     3241 gcggcgctca aggcgcaggg ccgccaactg ggtccggcga tgctgttctt cggctgccgc
     3301 catcccgagc acgacttcct ctatgccgac gagctcaggc gacatgccga cgccggcgtc
     3361 gtcgatttgc atgtcgcgtt ttcgcgccac gacggcaaga agatttacgt gcaggatctc
     3421 ctgaaggacc aagccgaccg cgtgcgggtc ctgatcgagc agggcgccat cgtttatgtc
     3481 tgcggcgacg gcggacgcat ggaacccgac gtcaaacgcg cgctggccgc gatgtacgac
     3541 gaggcctggg tggcgaaact cgcggccgac aatcgctacg tgctcgacgt gtgggccagc
     3601 agctgaaccg cgagctcgag cgggaccggg cgcgcgctcg cgacctgcgc cgcatcaagc
     3661 gggtggcgac ggcgttgctg atcttcactg cgtcgctgtt catcgtggcg cgccatttcg
     3721 agcccaccca ttgggcgtgg agctacgtcg cggccttcgc cgcggccgcg accgtgggcg
     3781 ggctcgccga ctggtacgcc gtcgtggcgc tgttccgccg gccgctc
//
LOCUS       DASWGA010000147         3064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1409627, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000147 DASWGA010000000
VERSION     DASWGA010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1409627"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VF991_03620"
     CDS             complement(<1..318)
                     /locus_tag="VF991_03620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018326672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HEX9555557.1"
                     /translation="MNRVFFYVQHLLGIGHLRRAATLARALSAGGFDVLLVSGGAPTA
                     GLALGGARLHQLPPVRAADEGLRDLCRLDGTPLDPAFCAERTKTLLNLFRAQGPDILL
                     TEQF"
     gene            complement(315..899)
                     /locus_tag="VF991_03625"
     CDS             complement(315..899)
                     /locus_tag="VF991_03625"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX9555558.1"
                     /translation="MTVPFAVLRHAATAWNAERRLQGLTDTELSPDGEAEARRWRLPS
                     PVDGWRRVCSPLQRARRTAELLQPAGAVTVCSALREMSFGVWEGHTIAELRATVGEAF
                     LAQERKGLDFQPPGGESPRAAMARIGQWVQSLDEPVVAVSHKATIRALLALATGWDMT
                     GRPPHKLDWHCLHFFQVTRDGALQVSRLNVPLES"
     gene            complement(896..1999)
                     /locus_tag="VF991_03630"
     CDS             complement(896..1999)
                     /locus_tag="VF991_03630"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9555559.1"
                     /translation="MRVLLHTPLKPPDSPTPSGDREMARGLARLLRRLGHKVVMPALS
                     RAEPGVPAPSAHLGLERRARRQAARLIAHWRALPAGHPERFDLWFTYHCYYRKPDWLG
                     PLVARAVGVPYVIAEASHAPRRAQGATRLGHRAVERALAAADLVLTVNPRDVAGVKAR
                     LQPGAHQRRLPPFIDTAPFVVSPARPASDPPLLLSVGMMRTRDKLDSYRVLAEALARL
                     GDRPWRAVLVGDGPARAEVEALMAPLGERVRFAGAVPHEKLPGFYAAADLYLWPAINE
                     AYGMAFLEAQAAGLAVVAGCTGGVPAVVADGVTGLLTPVGDAQAFAAAVARLLDAPAE
                     RARLAAAARARIATHHDERAAARALAAALRTLP"
     gene            complement(2005..>3064)
                     /locus_tag="VF991_03635"
     CDS             complement(2005..>3064)
                     /locus_tag="VF991_03635"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9555560.1"
                     /translation="KDGPRRVFAGWLKARRLPGYRAARKKFLTDLRRDPSANRMRRWG
                     QALVLAAELPSSIERIYAHFLHTPSSVTRYAATMRGLPWSVSAHAKDIWTSEPWDAAQ
                     KLADSAWLVTCTSVGLQRLKELAARPEQLKLVYHGLDFAHLPPPPVARPQRDGSHAGD
                     PVVILSIGRKVEKKGYDDLLDALARLPSALNWRFEHIGAGELAEPLEAQAAALGIAAR
                     CTWLEAQPQKAVFAALARADLFVLASKKAADGDQDGLPNVLMEAAHQGLAIVSTRAAA
                     IGEFLSDGENGLLVSPGAPDELAKALARLVGDPDLRRRLAQRAGEAVRTRFSFEAGVD
                     WIASALGQTPLLEARAAE"
BASE COUNT          491 a         1081 c         1105 g          387 t
ORIGIN      
        1 aaactgctcg gtgagcagga tgtcgggccc ctgggcgcga aagagattga gcagggtttt
       61 ggtccgctcg gcgcaaaaag cggggtcgag cggcgtgccg tcgagacggc aaaggtcccg
      121 gagaccctcg tcggcggcgc gcacaggcgg cagctggtgg agacgcgcgc cgcccagcgc
      181 caggccagcg gtcggcgcac cgcccgacac cagcagcacg tcgaagccgc cggcgctgag
      241 cgcacgcgcc agggtggcgg cgcggcgcag atgaccgatg cccagcagat gctgcacgta
      301 gaagaatacg cggttcatga ctcgagcggc acgttgagac ggctgacttg cagcgcaccg
      361 tcgcgcgtca cctggaagaa atgcaggcag tgccaatcga gcttgtgcgg cggccgacct
      421 gtcatgtccc aaccggtcgc cagcgccagc aaggcgcgaa tggtggcctt gtgggagacc
      481 gcgacgaccg gctcatcgag gctttggacc cactgcccga tacgcgccat ggccgcgcgc
      541 ggcgattctc cgccgggcgg ctgaaagtcg aggcccttgc gctcctgggc caaaaaggcc
      601 tcgccgacgg ttgcgcgcag ctcggcgatg gtgtggcctt cccagacccc gaaactcatc
      661 tcgcgcaacg ccgaacagac cgtgacggcg ccggccggct gcaacagctc ggcggtgcgc
      721 cgcgcacgtt gcaacgggct gcatactcgc cgccagccat cgaccggcga cggcaggcgc
      781 caacgccgcg cttcggcctc gccgtcgggg ctcaattccg tgtcggtcag cccctgcagg
      841 cgccgctcgg cattccaggc ggtcgcggcg tggcgcagca cggcgaaggg aacggtcatg
      901 gcaacgtccg caacgcggcc gccaaggcgc gggcggcggc gcgctcgtcg tggtgcgtgg
      961 cgatccgggc ccttgccgcc gcggccaacc gcgcgcgctc ggccggcgca tcgagcagcc
     1021 gggcgacggc agcggcaaag gcctgcgcat cgccgaccgg agtcaaaagg ccggtgacac
     1081 cgtcggccac gaccgcgggc acgccaccgg tgcagccggc gaccaccgcc aaaccggcgg
     1141 cctgggcttc gaggaaggcc atgccgtagg cttcgttgat tgcaggccaa aggtaaaggt
     1201 ctgcggcggc gtagaagccc ggcagcttct cgtgtggcac ggcgccggcg aagcgcacgc
     1261 gctcgcccag cggcgccatc agggcctcga cttcggcccg cgccggcccg tcgccgacca
     1321 gcaccgcccg ccatggccgg tcccccagcc gcgccagcgc ctccgccagc acgcgatagg
     1381 agtcgagctt gtcgcgggtg cgcatcatgc cgacgctcaa aaggaggggc ggatcgctgg
     1441 ccgggcgcgc cggcgagacg acaaagggcg cggtatcgat gaacggcggc agccggcgct
     1501 gatgcgcgcc cggctgcagc cgcgccttga cgccggcgac gtcgcgcggg ttcaccgtca
     1561 gcaccaggtc ggcggcagcc agcgcgcgct cgacggcgcg atggccgagc cgcgtcgcgc
     1621 cctgggcgcg gcgcggcgcg tgcgaggcct cggcgatcac atagggcacg cccaccgccc
     1681 gggcgacgag cggccccagc cagtcgggct tgcgatagta gcaatgatag gtgaaccaga
     1741 ggtcgaagcg ttcgggatgg ccggccggca aggcgcgcca gtgggcgatc agccttgccg
     1801 cctgccggcg ggcgcggcgc tcgaggccaa gatgcgccga gggtgccggc acgccgggct
     1861 cggcccggct gagcgcgggc atcacgacct tgtggccgag gcggcgcagc agacgggcca
     1921 ggccgcgcgc catttcgcga tcacccgagg gcgtgggact gtccggcggc ttcagcggcg
     1981 tgtgcaacag cacgcgcatg gcgatcactc cgcagcgcgc gcctctagca gaggcgtctg
     2041 gccgagcgct gacgcgatcc aatcgacacc ggcctcgaag gagaagcgcg tgcgcacggc
     2101 ctcgccggcg cgctgggcaa gacgccggcg tagatcgggg tcgcccacca ggcgggcgag
     2161 cgctttggcc agctcgtccg gtgcgccagg cgagaccagc agcccgtttt cgccatcgct
     2221 taaaaattcg ccgatcgccg cggcacgcgt ggagacgatg gccaggccct gatgcgccgc
     2281 ctccatcaac acgttgggca ggccgtcctg atcgccgtcg gcggctttct tgctcgccag
     2341 cacgaacagg tcggcgcgcg ccaacgccgc gaacaccgcc ttctgcggct gcgcctccag
     2401 ccaggtgcag cgcgcagcga taccgagcgc ggcggcttgc gcctccagcg gctcggcaag
     2461 ctcgccggcg ccgatatgct caaagcgcca gttgagcgcg gacggcagcc tggccaatgc
     2521 atcaagaagg tcgtcgtaac ccttcttctc gaccttgcgg ccaatcgaca ggatgacgac
     2581 gggatcgccg gcatgggagc cgtcacgctg cggccgggcc acgggcggcg gtggcagatg
     2641 agcgaagtcg agcccgtgat agacgagttt caactgctcc ggccgagcgg ccagctcctt
     2701 cagacgctgc agaccgacgc tggtgcaggt caccagccag gcgctgtcgg cgagcttttg
     2761 ggcggcgtcc cacggctcgc tggtccagat gtccttggca tgcgccgaca cgctccacgg
     2821 caggccgcgc atcgtcgccg cataacgcgt caccgacgaa ggcgtgtgca ggaaatgggc
     2881 ataaatccgc tcgatcgacg acggcagctc ggccgccagc accagcgcct ggccccagcg
     2941 ccgcattcga ttggcgctgg gatcgcgccg cagatcggtg aggaactttt tccgcgccgc
     3001 ccggtagccg ggcaggcgcc ttgccttcag ccagccggcg aacacgcggc gcggaccgtc
     3061 cttg
//
LOCUS       DASWGA010000148         2253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1284295, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000148 DASWGA010000000
VERSION     DASWGA010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1284295"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1575
                     /locus_tag="VF991_03640"
     CDS             <1..1575
                     /locus_tag="VF991_03640"
                     /inference="COORDINATES: protein motif:HMM:TIGR02457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative maltokinase"
                     /protein_id="HEX9555561.1"
                     /translation="YVTVVLRNRLDEALRSAAPLLERETLPPYLQKRRWFGAKDQTLQ
                     SSQIVYLAALDSEHDVLLAEIEVKTDGTTSRWQLPLSTCWEDEPGAALPSQLALARVR
                     RGRRVGLLTDAFSLSVFARRMLAALANGERIDTPQGRIVFEPTPDKVEVLRRPDDATV
                     MWLTAEQSNSSLIVDDAVMLKIFRRISTGEHPEAEMSRYLTANNFSNSPALLGEVCRI
                     DADGQRHALAVAQAFVRNQGDAWTWALNQVNRAFDATASREASAESRGDDIKDYHALA
                     AAIGRQLGAMHTVLARPTDDPAFAPRAAVREDVEAWIERATGLLSGAFDAIAARKDWD
                     NEAVEACARSLVDNREALERALRRLGESGEGTLMTRIHGDFHLGQVLVASADAYIIDF
                     EGEPTRPLAERRRKASPWRDVAGLLRSIDYAAATALDPKNVIASRVSPGRRQRLITRL
                     REGAGKAFLGGYREAAGELAGTASGGLLDFFLIEKAAYEVNYEAANRPNWLAIPVSGL
                     ARIANRLLTAAPSVAS"
     gene            1572..>2253
                     /locus_tag="VF991_03645"
     CDS             1572..>2253
                     /locus_tag="VF991_03645"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177736.1"
                     /note="catalyzes the transfer of a segment of a
                     1,4-alpha-D-glucan chain to a primary hydroxy group in a
                     similar glucan chain; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HEX9555562.1"
                     /translation="MTAAALGRLDRPDVEALATARHRDPFDVLGPHDGPGGRSIRVFL
                     PGAQSVEVLRRADRSPLGALVESETPGLFEGTVSDASPYLLRIKWPQAVQETEDPYSF
                     GPLLGELDLHLFNEGRHFRLAEALGANVVTVDGVQGVRFAVWAPNAERVAVIGDFNSW
                     DARRHPMRLRFPSGIWELFVPRLAAGALYKFDIVGPGGVRLPAKADPVAQQAEPAPAT
                     ASVVASPRS"
BASE COUNT          334 a          785 c          793 g          341 t
ORIGIN      
        1 tacgtcaccg tcgtgctgcg caaccgcctc gacgaggcgc tgagatcggc ggcgccactt
       61 ctcgagcgcg agacgctgcc gccctacctg cagaagcgcc gctggttcgg cgccaaggat
      121 cagaccctgc aatcctcgca gatcgtctat ctcgccgctc tggatagcga gcacgacgtg
      181 ctgctggcgg agatcgaggt caagacggac ggcacgacca gccgctggca gctgccgctc
      241 tcgacctgct gggaggacga gccgggcgcg gcactgccgt cccagctcgc gctggcgcgc
      301 gtgcggcgcg ggcggcgggt tggcctcttg accgacgcct tctcgctgtc ggtcttcgca
      361 cgccggatgt tggcggcgct ggccaacggc gagcgcatcg acacgccgca gggccggatc
      421 gtcttcgagc cgacgcccga caaggtcgag gtcctgcgcc ggccagacga cgcgactgtg
      481 atgtggctga cggccgagca gtcgaacagc tcgctgatcg tcgacgacgc ggtcatgctg
      541 aaaatcttcc gccgcatctc gaccggcgag catcccgagg ccgagatgag ccgctatctg
      601 acggcgaaca atttttccaa ttcgccggcg ctgctgggcg aggtgtgccg catcgatgcc
      661 gacgggcaac gccatgccct ggccgtcgcc caggccttcg tgcgcaatca gggcgacgcc
      721 tggacctggg ccctgaacca ggtcaaccgc gcctttgacg ccacggcgag ccgcgaggcc
      781 tccgccgaat cgcgcggcga cgacatcaag gactatcacg ccctcgccgc ggcgatcggc
      841 cggcagttgg gcgccatgca caccgtgctg gcgcggccga ccgacgatcc ggccttcgcg
      901 ccacgcgcgg cggtccgcga ggacgtcgag gcctggatcg agcgggcgac ggggttgctg
      961 tcgggagcgt tcgacgccat cgccgcgcgc aaggactggg acaacgaagc ggtcgaagcc
     1021 tgcgcacgct cgctggtcga caaccgcgag gcgctggaac gcgcgttgcg ccgcctcggc
     1081 gagagcggcg aaggcacgct catgacgcgc atccatggcg acttccatct cggtcaggtg
     1141 ctggtcgcca gcgccgatgc ctacatcatc gatttcgagg gcgaacccac gcggccgctg
     1201 gccgaacgcc gccgcaaggc cagcccctgg cgcgacgtcg cgggcctgct gcgctcgatc
     1261 gactatgcgg cggcgacggc gctcgacccc aagaacgtga tagcaagccg cgtctcgccg
     1321 ggacggcgcc agaggctgat aacgcgcctg cgcgagggcg cgggaaaggc cttcctcggc
     1381 ggctatcgcg aggctgcggg cgaattggcc ggcacggcga gtggcgggct gctcgatttc
     1441 ttcctgatcg agaaggcggc ctacgaggtg aactacgagg cggccaaccg gccgaactgg
     1501 ctcgccatcc cggtgagcgg cctggcgcgc atcgccaacc gtctgctgac ggctgcgccg
     1561 agtgtcgcat cgtgaccgcc gcggcgctcg gccggctgga tcgtcccgac gtcgaagcgc
     1621 tggcgacggc gcgccatcgc gatccgttcg atgtgctggg cccgcacgac ggcccgggcg
     1681 gacgcagcat tcgcgtcttc ctgccggggg cgcagtcggt cgaggtgctg cgccgggccg
     1741 atcgatctcc gttgggggca ctggtcgaaa gcgagacacc cggcctgttc gaagggacgg
     1801 tatcggacgc ctcgccctat ctgttgcgca taaagtggcc gcaagcagtg caggaaaccg
     1861 aggatcccta ttccttcggt ccgctgctgg gcgagctcga tctgcatctc ttcaacgagg
     1921 gccggcattt ccgcctggcc gaggcgctcg gcgccaacgt cgtgaccgtc gacggcgtcc
     1981 agggtgtgcg cttcgcggtc tgggcgccca acgccgagcg ggtggcggtg atcggcgact
     2041 tcaattcgtg ggacgcgcgc cgccatccca tgcgcctgcg ctttccctcg ggcatctggg
     2101 aactcttcgt gccccgtctg gcggcgggcg cactctacaa gttcgatatc gtcggcccgg
     2161 gcggcgtgcg cctgccggcc aaggccgacc cggtggcgca acaggccgag cccgcgccgg
     2221 ccacggcatc ggtcgtggcc tcgccgcggt cct
//
LOCUS       DASWGA010000149         3128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_20748, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000149 DASWGA010000000
VERSION     DASWGA010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20748"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VF991_03650"
     CDS             <1..485
                     /locus_tag="VF991_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HEX9555563.1"
                     /translation="CLACHGEKGQSTMAEVPSLGAQMTPYILIQLYLFREKLRRLDVM
                     NDAVKGFTDDDLRTFADTISRLPPPRPTADTTDPARMARGQALVRQFRCNVCHNPDLV
                     GRDAVPRIAGQREDFLVKTMREYKGNIRPGYDASMADVLQPISDADILDLAYFAARQP
                     "
     gene            complement(612..1832)
                     /locus_tag="VF991_03655"
     CDS             complement(612..1832)
                     /locus_tag="VF991_03655"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9555564.1"
                     /translation="MAIRRPLDGMLVLDLGQIYNGPYCGLMLGFMGARVLKIEPPEGD
                     VVRRRKREVEPWPLVMLNSNKESVVLDLKQARGKQIFLELVARADVVVENFAVGVMDR
                     LGLSWDTLHELNPRLVYGGSSGFGLDGPYRDLPAMDVTVQAMSGIMNSTGQPDGPPTK
                     AGAAVCDFLAGIHLCAGILGALVQRERTGEGQRVEVAMHEAAVIALASALGAVMDGDA
                     NVPQRTGNRHPALAMAPYNTYPCTDGHVAIFTSAERHWQSMCDLLGRPDLTKNPEYSS
                     TVGRARHMVEIDDIVSAWTITKSKEEVMRLLNKAHVPCAPVKTAREVAHDPHLEARGF
                     WVDIQHPRRGATRVPISPIRLHAGGKAEIRSPAPTLGQHTEAVLAELLGLKAEELATL
                     RAERVTEPVTERKA"
     gene            2171..2527
                     /locus_tag="VF991_03660"
     CDS             2171..2527
                     /locus_tag="VF991_03660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009755827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX9555565.1"
                     /translation="MNDVRRIDPGPRLSEASVWGGRMYLSGMIPEDTSLDITGQVKQA
                     LAEIDALLAKGGSDKTKILSAVIWLADIGDFAAMNAVWDAWVVPGQTPARATVQARLN
                     EPKMKVEIMVVAATSP"
     gene            2661..3008
                     /locus_tag="VF991_03665"
     CDS             2661..3008
                     /locus_tag="VF991_03665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015689125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX9555566.1"
                     /translation="MSVNRINAGPRMSSAVVHGNTVYLAGLTADDTKADVKGQTKQIL
                     DKIDKFLKEAGTDKSKILSANIWLTDIGTWGQMNEVWDAWVAPGNTPARATVEAKLAN
                     PALKVEIMVQAAK"
BASE COUNT          552 a         1023 c         1024 g          529 t
ORIGIN      
        1 cctgcctcgc ctgccacggc gagaagggac aatcgaccat ggccgaggtg ccctccctcg
       61 gcgcccagat gacgccctac attctcatcc agctctacct gttcagggaa aagctgcgtc
      121 gcctcgacgt catgaacgat gccgtaaaag gcttcaccga cgacgacttg cgcacatttg
      181 ccgacacgat ctccaggctg ccgccgccgc ggccgacggc cgacacgacc gatccggcgc
      241 gcatggcccg tgggcaagcc ctggtccgcc aatttcgctg taatgtttgc cacaaccctg
      301 atctggttgg ccgcgatgcc gtccctcgga tcgccggtca gcgcgaggat tttctcgtca
      361 agacgatgcg cgagtacaaa ggcaacatac gtcctggata cgacgcgtcg atggccgatg
      421 tcctgcagcc catttccgac gctgatatcc tcgatctcgc ctattttgcc gctcgacagc
      481 cttaggagta tacgcccgag gcccgccgtg atgtcaccgg ctcggtggcg gatgggcgag
      541 atcggaaccc gtgtcgcgtc ctctcatgct cctctccccc ttgggtcccc cagggggaga
      601 ggagcatgag gctaggcctt ccgttccgtc accggctcgg tgacgcgctc cgcccgcagc
      661 gtcgccagct cctccgcctt cagcccaagc agctcggcga gcacggcctc ggtatgctgg
      721 cccagcgtcg gcgcgggact gcggatctcc gccttgccgc cggcatgcag gcgtatgggc
      781 gagatcggta cccgcgtggc gccgcggcgc ggatgctgga tgtcgaccca gaagccgcgc
      841 gcctcgagat gaggatcgtg cgccacctcg cgcgccgtct tcactggcgc gcagggcaca
      901 tgcgccttgt tgaggagtcg catcacctct tccttcgatt tcgtgatcgt ccaggcgctg
      961 acgatgtcgt cgatctccac catgtggcgg gcgcggccca ccgtgctcga atactccggg
     1021 tttttggtga ggtcgggccg gccgagcagg tcgcacatcg actgccagtg ccgctcggcc
     1081 gaggtgaaga tcgccacgtg gccgtcggtg catgggtagg tgttgtacgg cgccatggcg
     1141 agcgcgggat gccggttgcc ggtgcgctgc ggcacgttgg cgtcgccgtc cattaccgcc
     1201 cccagggccg aggcgagcgc gatcacggcc gcctcgtgca tggcgacctc gacgcgctgg
     1261 ccttcgccgg tgcgctcgcg ctggacgagc gcccccagga tgccggcgca gagatggatg
     1321 ccggcgagga agtcgcagac ggcggcgccc gccttggtcg gcgggccatc aggctggccg
     1381 gtcgagttca tgatgccgct catcgcctgg acggtgacgt ccatggcggg gagatcgcga
     1441 tagggcccgt cgagcccgaa gccggagctg ccgccataga ccaggcgagg attgagctca
     1501 tgcagggtgt cccagctcag ccctagccgg tccatgacgc cgacggcgaa gttctcgacc
     1561 acgacgtcgg ccctggcgac cagctcgagg aagatctgct tgccgcgcgc ctgcttgaga
     1621 tcgagcacca cggactcctt gttggagttc agcatgacca gcggccaggg ctcgacctcg
     1681 cgcttgcggc ggcgcacgac gtcgccctcc ggcggctcga tcttgagcac gcgggcgccc
     1741 atgaagccca gcatcagccc gcaatagggt ccgttgtaga tctgcccgag atcgaggacg
     1801 agcatgccgt cgagcgggcg gcggatggcc atgactattt ccttctggct gtctcaatcc
     1861 gaacaacgac aagcgttcct gtcgtcctga gcgaagcgaa ggacctcatg gcatttcgac
     1921 cggcacactg cttgcaatcg ccatgagatc cttcgcttcg ctcaggatga cagaagggct
     1981 tatcacgcat ttgcgattct gatgctaacg cggctcagga tcaccttccg gctggcgact
     2041 ttatcgcgaa gacgcaggcg gtgggcgtat gaagctcttg ccagaaccgt cctgcgaagc
     2101 gtctcctctc atgttcctct gccccgctag ggggagaggc tagatgaggg ggcttcgaga
     2161 gggagaaaac atgaacgacg tccgccgcat cgatcccggc ccgcggctga gcgaggccag
     2221 cgtctggggc ggccggatgt atctctcggg catgatcccg gaggacacct cgctggacat
     2281 caccggccag gtgaagcagg cgctggccga gatcgacgcg ttgctggcga agggcggcag
     2341 cgacaaaacg aagatcctgt ctgccgtcat ctggctggcc gacatcggcg acttcgccgc
     2401 catgaacgcg gtgtgggacg cctgggtcgt gccgggccag acgccggccc gggccaccgt
     2461 gcaggcccgg ctgaacgaac cgaaaatgaa ggtcgaaatc atggtcgtcg cggccacctc
     2521 accctgagga gcggcccgaa gggtgggaac gagcaccatg cctgtagcca tgcttcgaga
     2581 cgcgcgctcc tcagcatgag gtggtgagag agcaccaggc tctgctaagg tcgcggccgt
     2641 tttcaaggag gaaagacaac atgagtgtca atcgcatcaa cgccggtccc cgcatgagca
     2701 gcgccgtcgt gcacggcaac acggtctatc tcgccggcct caccgccgac gacaccaagg
     2761 ccgacgtcaa ggggcagacc aagcagatcc tcgacaagat cgacaagttc ctgaaggaag
     2821 ccggcaccga caagtcgaag atcctgtcgg ccaacatctg gctgaccgac atcggcacct
     2881 ggggccagat gaacgaggtg tgggacgcct gggtggcgcc cggcaacacg ccggcgcgcg
     2941 ccacggtcga agccaagctc gccaatcccg ccctcaaggt cgagatcatg gtgcaggcgg
     3001 cgaaataggt cgctcgagcg tcaacggaaa agggccggca gtcgccggcc cttttgcttt
     3061 gcgccaagga cgaggtcatg gatcggcgac agttcatctc ggcgctgggc ggcgcagccg
     3121 catgttgg
//
LOCUS       DASWGA010000150         4846 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1659812, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000150 DASWGA010000000
VERSION     DASWGA010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4846
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1659812"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..365
                     /locus_tag="VF991_03670"
     CDS             159..365
                     /locus_tag="VF991_03670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEX9555567.1"
                     /translation="MQLTAVLIPAPEGGYIANNPETGTTSQGETIEEALANLREATEL
                     YLEEFPLPSSGGPFITTFEVAVNA"
     gene            420..575
                     /locus_tag="VF991_03675"
                     /pseudo
     CDS             420..575
                     /locus_tag="VF991_03675"
                     /inference="COORDINATES: protein motif:HMM:NF019540.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
     gene            643..1371
                     /gene="hisA"
                     /locus_tag="VF991_03680"
     CDS             643..1371
                     /gene="hisA"
                     /locus_tag="VF991_03680"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEX9555568.1"
                     /translation="MLLFPAIDLKDGKCVRLLRGDMARATVFNDSPAAQAKAFANAGC
                     EWLHLVDLNGAVEGHPVNRAAVESILKEVAVPAQLGGGIRTIESIAQWIDSGVKRVIL
                     GTVALKEPGLVKAACRQWPGQVAVGIDARDGIVAVDGWTKQSTVRALDLALRFEDAGV
                     SAIIYTDIDRDGALGGVNVDATITLAQHLTTPVIASGGVSSLDDLRELRPAEEYGIIG
                     AIVGRALYDGRVTVPDAIRVLKGD"
     gene            1376..2149
                     /gene="hisF"
                     /locus_tag="VF991_03685"
     CDS             1376..2149
                     /gene="hisF"
                     /locus_tag="VF991_03685"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEX9555569.1"
                     /translation="MLKVRIIPCLDVHDGRVVKGVQFVDLRDAGDPVEQARVYDAAGA
                     DELTFLDITASHENRDTILDVVARTAEQCFMPLTVGGGVRALSDIRRLLLAGADKVSI
                     NSAAVARPDFVREAAEKYGDQCIVVAIDARQTAPGKWEVFTHGGRKGTGLDAVTWARR
                     MTDSGAGEILLTSMDRDGTKSGFDLALTRAVSDAVPVPVVASGGVGTLDHLVEGVIRG
                     GASAVLAASIFHFGEFTIAQAKERLAQAGVPIRQISRAA"
     gene            2232..2618
                     /locus_tag="VF991_03690"
     CDS             2232..2618
                     /locus_tag="VF991_03690"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEX9555570.1"
                     /translation="MAKHKKAKKAHKKKRQNGLASIDEHVLDRLYSVIDSRKGADPDT
                     SYTARLFSRGRQQIAKKLGEEAVEALIEGIRGNRAGLIGESADVLYHLLTLWAATGVK
                     PQAVWGELSRREGLSGIAEKAARKRT"
     gene            2752..3138
                     /locus_tag="VF991_03695"
     CDS             2752..3138
                     /locus_tag="VF991_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020044600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEX9555571.1"
                     /translation="MAAYDRNNVFARILRGELPCKKVHEDAFALAFHDIHPLAPVHVL
                     VIPKGEYVSQADFCATAPAELVVGFWRAVAKVAHDLGLEPQGYRIVANHGPNGGQLVF
                     HFHVHVFGGRQMSHRMGNMPRPGDKE"
     gene            3135..4160
                     /locus_tag="VF991_03700"
     CDS             3135..4160
                     /locus_tag="VF991_03700"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9555572.1"
                     /translation="MIPRRVLLAAGLLAPVTARAQTGGKGFYSSGTKQRAVRFAGSDG
                     ASLAGTLLLPIKSELGRVPGIVLVAGSGPTDRDGNNSLVPERIDLLKQLAELLARAGI
                     ATLRYDKRGIGGSTPRPRGALQEQERFFAWDNFVGDLVAAHGELIRHDEIKPYATALL
                     GHSEGGLLALAAVPEITKSRPHGLALTATPGRPMRDILRAQIARNAPQLLDGVERTMA
                     TIQASGHVPADLPRELEVVFPAYAGPFLRRLLSFDPAQVLLGLELPCLVVQGAADRQV
                     VPMEDVQPLIDALGKRGAPGEAVVIPGVSHNLKLMPWPADTGFGGPIAPAVAAKLTDW
                     LVPLLGA"
     gene            4210..>4846
                     /locus_tag="VF991_03705"
     CDS             4210..>4846
                     /locus_tag="VF991_03705"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9555573.1"
                     /translation="MAATVCALTPSVGAEISGVDLRGLSDSDFAAVERAWTTHSMILL
                     RGQTLSDDDLLSFSRRFGELDPPPNQERGRISPPGYPDIYVVSNVLDAKGDPIGALGA
                     GEAVWHTDMSYLDRPPDASMLYSLEIPESGGSTWFCGMQAACDALPAELRRRIEGRRI
                     KHDGTYNSGGYLRQGVTPTDDPLAAPGAWHPAILRHPANGRATLYLGRRRNS"
BASE COUNT          812 a         1679 c         1614 g          741 t
ORIGIN      
        1 gacgcggctc gagcgcggcc aggtcgaaca gacgttgcgc aagcgcagcc aggaactgga
       61 accccaggcg ccgccgaccg atcggcccag gcgatatagc ggccagtagg aacgaaagtc
      121 ggcgagccat gatgggccgg tcccgaggag atgtagtcat gcagctgacg gcggtcctta
      181 ttccagctcc ggaaggcgga tacatcgcaa ataatccaga aaccggcacg acctcccaag
      241 gggagacgat cgaggaggcc ttggccaatt tgcgtgaggc cacggagctc tatcttgagg
      301 aattcccttt gccgtcgagc ggcgggccct tcattacgac cttcgaggtc gccgtgaatg
      361 cctagcctgc cgaacgtttc ggcgcgcgaa gcaattcgcg ccccgaaacg ttcgatttcg
      421 tcatcaagcg ccagcgtggc cgccacgtca tcctgcgacg cggatcgacc ggatgcgccg
      481 tgccggacca caaggaattg aagatcggca ccttgaacgg cattctgaag caagccggcg
      541 tttcggctga tgaattcgtc gctgcgctga aatagccgtc aaggattgtc agggccggac
      601 ggggtggcgc agcccagccc ggcgcgctaa acccgcgccg ccatgcttct gtttcccgcc
      661 atcgatctca aggacggcaa gtgcgtgcgg ctgctgcgcg gcgacatggc gcgcgccacg
      721 gtgttcaacg acagtcccgc cgcccaggcc aaggccttcg ccaatgccgg ctgcgaatgg
      781 ctgcacctgg tcgatctcaa cggcgcggtc gagggccatc cggtgaaccg cgcggcggtc
      841 gagagcatcc tcaaggaggt ggcggtgccg gcgcagctgg gcggcggcat ccgcaccatc
      901 gagagcatcg cccaatggat cgattcaggc gtcaagcggg tgatcctggg caccgtcgcg
      961 ctcaaggagc cgggcctggt gaaggcggcc tgccggcagt ggccgggcca ggtcgcggtc
     1021 ggcatcgacg cccgcgacgg catcgtggcg gtcgacggct ggaccaagca gagcacggtg
     1081 cgcgcgctcg acctggcgtt gcgcttcgag gacgccggcg tgtcggccat catctacact
     1141 gacatcgacc gcgacggcgc cctgggtggc gtcaatgtcg acgccaccat caccttggcc
     1201 cagcacctca ccacgccggt gatcgcctcg ggcggcgtga gctcgctcga cgacctgcgc
     1261 gaattacggc cggccgagga gtacggcatc atcggcgcca tcgtcggccg cgcgctctac
     1321 gatggccggg tcaccgtgcc agacgccatc cgcgtcctga aaggcgacta ggccggtgct
     1381 gaaggtccgc atcatcccct gtctcgacgt gcatgacggc cgcgtggtca agggcgtgca
     1441 gttcgtcgac ctgcgcgacg ccggcgaccc ggtcgagcag gcgcgcgtct acgacgccgc
     1501 cggcgccgac gagctcacct tcctcgacat cacggcgagc cacgagaacc gcgacaccat
     1561 cctcgacgtg gtggcgcgca cggccgagca gtgcttcatg ccgctcaccg tgggcggcgg
     1621 cgtgcgtgcg ctctccgaca tccgccgcct gctgctggcc ggcgccgaca aggtctcgat
     1681 caattccgcc gccgtcgcgc ggcccgattt cgtgcgcgag gcggccgaga aatacggcga
     1741 ccaatgcatc gtggtggcga tcgacgcccg ccagacggcg cccggcaaat gggaggtctt
     1801 cacccatggc gggcgcaagg gcacggggct cgacgccgtc acctgggcgc gccgcatgac
     1861 cgattcgggc gccggcgaga tcctgctcac ctcgatggac cgcgacggca ccaagtcggg
     1921 cttcgacctc gcgctgactc gcgcggtgtc ggatgccgtg ccggtgccgg tcgtcgcctc
     1981 gggcggcgtc ggcacgctcg atcacctggt cgagggcgtg atccggggcg gcgcctcggc
     2041 ggtgctcgcc gcctcgatct tccatttcgg cgaattcacc atcgcccagg ccaaggagcg
     2101 actggcccaa gccggcgttc cgatacgaca aatctcgcgc gcggcgtgat tttggcgtaa
     2161 aatgacaaaa gcgcccggcc aagaggcgcg tgtcgatcgc ccgtttcctt gggcggcgga
     2221 gttccccctg aatggccaag cacaagaaag ctaaaaaggc gcacaaaaag aagcgccaga
     2281 acggtcttgc aagcatcgac gagcacgtgc tcgaccggct ttattccgtg atcgacagtc
     2341 gcaagggcgc cgatcccgac acgtcctaca ccgcccgcct gttcagccgc ggccgccagc
     2401 agatcgccaa gaagctgggc gaagaggccg tcgaagcgct gatcgaaggc atccgcggca
     2461 accgggccgg gctgatcggc gaaagcgccg acgtgcttta tcacctcctg accctgtggg
     2521 ccgcgaccgg cgtgaagccc caggcggtct ggggcgagct gtcccgccgc gagggcctgt
     2581 cgggcatcgc cgaaaaggcc gcgcgcaagc gcacgtgacg gcaaaaggtg acaacgaagt
     2641 tgtcatcgcg ggcggagtaa cctccgccct gaagcgaagc gaaggtatta ttgcggcctc
     2701 aaaggcccct cgcccttcgg gttcggggtg acagccgagt tcggagctcc catggccgcc
     2761 tacgatcgca acaacgtctt cgcccgcatc ctgcgcggcg agctgccgtg caagaaggtc
     2821 catgaggacg cctttgcgct ggccttccac gacatccatc cgctggcgcc ggtgcatgtc
     2881 ctggtgattc ccaagggcga atacgtctcc caggccgatt tctgcgccac cgcgccagcc
     2941 gagctggtgg tgggcttctg gcgcgccgtg gccaaggtcg cgcacgacct cgggctcgag
     3001 ccgcaaggct atcgcatcgt cgccaatcac ggccccaatg gcggccaact cgtcttccac
     3061 tttcatgtcc atgtgttcgg cggccgacag atgagccatc gcatgggcaa catgccgcgg
     3121 cctggcgaca aggaatgatc cctcgccgcg tcctgctggc ggcgggcctc ctcgcgcccg
     3181 tgacggcgcg cgcccaaacc gggggcaagg gcttttatag cagcggcacc aagcagcgcg
     3241 ccgtgcgctt cgccggcagc gacggcgcga gcctggcggg caccctgctg ttgccgatca
     3301 aaagcgagct cgggcgggtg ccggggatcg tgctggtggc tggcagcggg ccaaccgacc
     3361 gcgacggcaa caactcgctg gttcccgaac gcatcgatct cctgaagcag ctcgccgaat
     3421 tgctggcccg ggcgggcatc gccaccttgc gctacgacaa gcgtggcatc ggcggctcca
     3481 cgccgcgacc gcgcggtgca ctgcaggaac aggagcgctt cttcgcctgg gacaatttcg
     3541 tgggcgacct ggtggccgcg cacggcgagc tgatcaggca cgacgagatc aagccctacg
     3601 ccaccgccct gctcggccac agcgaaggcg gccttttggc gctcgccgcc gtgccggaga
     3661 tcaccaagag ccggccacac ggcctggcgc tgacggcgac gcccggccgg ccgatgcgcg
     3721 acatcttgcg cgcccagatt gcccgcaacg caccccaact tctcgacggc gtcgaacgca
     3781 ccatggccac gatccaggcc agcggccatg taccggccga tctgccgcgc gagctggagg
     3841 tggtgtttcc ggcctatgcc ggtccgttcc tgcggcggct gctgtcgttc gacccggcgc
     3901 aggtgctgct tgggctcgag ctgccttgcc tggtcgtgca gggcgcggcc gaccgccaag
     3961 tggtgccgat ggaggacgtg cagccgctga tcgacgccct gggcaagcgc ggcgcgccag
     4021 gcgaagcggt ggtcattccc ggggtcagcc acaatctcaa gctgatgccg tggcccgccg
     4081 ataccggctt cggcggaccg atcgcgcccg ccgtcgccgc caagctcacg gactggctgg
     4141 tcccattgct gggtgcttga tcgctcaccg aagggggccg atcatcgcgc cgacaacgga
     4201 ggaagcagca tggccgcgac ggtgtgcgcg ctcacccctt cagtgggcgc ggagatttcc
     4261 ggcgtcgatc tcaggggctt gagcgactct gatttcgccg ccgtcgagcg cgcctggacg
     4321 acccattcga tgatcctgct gcgcggccag acgctcagcg acgacgatct cctctctttc
     4381 agcaggcgct tcggcgaact cgatccgccg cccaaccagg agcgcggccg catcagcccg
     4441 ccgggctatc ccgacatcta tgtcgtgtcc aacgtgctcg atgccaaagg cgatccgatc
     4501 ggcgcgctgg gcgcgggcga ggcggtctgg cacaccgaca tgagctatct cgaccggccg
     4561 cccgatgcct ccatgctcta ttccctggag atccccgaaa gcggcggcag cacctggttc
     4621 tgcggcatgc aggccgcctg cgacgcactg cctgccgagc tcaggcgccg gatcgagggc
     4681 cggcgcatca agcacgacgg cacctacaat tcgggcggct atctgcgcca gggcgtgacg
     4741 ccgaccgacg atcccctggc cgcgcccggc gcctggcatc cggcaatcct gcgccatccg
     4801 gccaacggcc gcgccacgct ctatctcggg cgccggcgca attccc
//
LOCUS       DASWGA010000151         5737 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1917609, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000151 DASWGA010000000
VERSION     DASWGA010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5737
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1917609"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VF991_03710"
     CDS             complement(<1..440)
                     /locus_tag="VF991_03710"
                     /inference="COORDINATES: protein motif:HMM:NF027439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX9555574.1"
                     /translation="MPLLYRKQGHTGILTLSRPAARNCWGQDYADGLIRHLDEAAEDD
                     DVRSVILTGDEAGGAFSAGANLRDPNTHNTRSAEAFIKRVGRARNFPSNLVSDFPKPV
                     IAAVNGYAIGIGCIITFCCDLIVASERAEWRLPQVALGILPNYGG"
     gene            complement(488..2116)
                     /locus_tag="VF991_03715"
     CDS             complement(488..2116)
                     /locus_tag="VF991_03715"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9555575.1"
                     /translation="MSAGPVSRTLGHLLDEMAAARPAADAVVYRDQRLDYAGLKVEVD
                     GFARALMAVGIRHGDRVALLASNRTEWIVAALAAARIGAIVVAISTFSTPRELAWSLE
                     HCGAAALITLDAFRGRPFLDPLRELCPELDSAHAGRLRSGRLPSLRTVVALDGRPRSG
                     VFSLAEFLAQGAAVDAVALAAAQQAVAPTDICYILYTSGSTAAPKGVTLAHGPLIANA
                     FAIGERQHLGATDRLWLAVPLFWSFGSANALPAIMTHGGCIVLQESFEPGEALALIER
                     ERCSVYYGMANMARALLEHPDHPQRRLGAMRTGLTIGAPEDIAMTIQALGADELCTVY
                     GSTETYGNCAVTDAADALPLRLRSQGLPLPGMTIRTVDPLTRQPLPPGDVGELAVRGH
                     VTPGYFCAPELDAEAFDRDGYFLTGDLGSIDADGRIRFRGRLKEMIKTGGANVAPLEV
                     EQVLLEHPDIVQAHVVGVADRLKGEIVAAAVELRAGADRDTAAIIAFCRQRLASYKVP
                     VRIAFRAAAEFPRTPTGKIHKPSLRQELAADVTA"
     gene            complement(2141..2896)
                     /locus_tag="VF991_03720"
     CDS             complement(2141..2896)
                     /locus_tag="VF991_03720"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9555576.1"
                     /translation="MEIRLDRHGRHVAIVTIDNQPRLNAMTRAMLAELGRLWDELERD
                     DSRCIILTGAGERAFTVGADVSGDLSAGPETARMVNHALLKNDAYSKPIIAAINGDCI
                     GGGLELVLATDIRAAVPRARFGLTEVKWSIYPFGGSTIKLIQQIGYVHAMDLLLTARL
                     IDAEQATRLGLVNRVVEPAGLMGWAIETAEMIAANSPSAVQAVKRQVSATIADHALTR
                     EALEQQLGDGVRASRHFAEGIAAFREKRPPRYE"
     gene            complement(2896..3876)
                     /locus_tag="VF991_03725"
     CDS             complement(2896..3876)
                     /locus_tag="VF991_03725"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003960 - NADPH:quinone reductase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase family protein"
                     /protein_id="HEX9555577.1"
                     /translation="MRALICRQWGGIDGLSLGEAPVPQPAAGEVLIEVKATAVNYADS
                     IMVAGRYQTKPELPFSPGLETAGVVAACGEGARGLKAGDKVMAILPYGGLAEFAVAPV
                     AETWVIPDGMSFAEAGAFPISYISSHVALRWQGRLEAGETLLVLGAAGGVGLTAVEIG
                     KAMGARVIAAASSPEKLAVAVEHGADATIDYAKEPLTERVMALTGGKGADVCFDPVGG
                     ALFDPALSSLGWGGRILLIGFVGGVPQIPANRLLVKHRAALGSSLRYFRWHAPDKLAR
                     SVDELFRWYGEGKLWPCITHRLPLERGVEAIRLLTDRRAHGKVVVELEAA"
     gene            complement(3969..4673)
                     /locus_tag="VF991_03730"
     CDS             complement(3969..4673)
                     /locus_tag="VF991_03730"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX9555578.1"
                     /translation="MDLKEEDILGADIGRHWYYRSKAAALRRAVAGLQPRHILDVGAG
                     SGFFSRHLLAETGAQSALCVDTGYTSERDDSVAGKPVLYRRDSGPTDCDLVLMMDVLE
                     HVDDDRGLLRHYAAKVPSGAHFLVTVPAFRFLWSGHDVFLEHKRRYRLGEIEATMRQA
                     GLEVVRGSYYFGLVFPLAAAVRLATRSSDEPRSSLSRQGAFANGLLGAICAAELPMFP
                     INRLAGLSAFVLARKP"
     gene            complement(4677..>5737)
                     /locus_tag="VF991_03735"
     CDS             complement(4677..>5737)
                     /locus_tag="VF991_03735"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX9555579.1"
                     /translation="RFTGTLFVPESILPSSHRYGSALERQLSKQRARRPADPLLSLVV
                     PVFNEEDSIDIFLDTVPALMERDGLRFEIVFVNDGSRDNTLGHLLDRSGADRRLRIVN
                     LSRNFGKEAALTAGIDHARGDVIVPMDIDLQDPPELIEPFMARWREGYDVVYGVRTMR
                     SWDTAAKRLSAGWFYRVFNSMSPVRIPENVGDFRLVDRRAIEVLRQLPERNRFMKGLF
                     AWVGFNAVGVPYERPARAAGASKFNLWRLWNFALDGVVSFSTAPLRAWFYVGVVIAAI
                     AVLYALFIVTRVLIFGIDTPGYASLLIAVLLMGAIQLLSLGIIGEYLGRLFLEVKGRP
                     IYVIEGVYEDGAAQPPKS"
BASE COUNT          953 a         1961 c         1990 g          833 t
ORIGIN      
        1 ccgccatagt tcggcaggat gccgagtgcg acctgcggca atcgccactc cgcccgctcc
       61 gacgccacga tcaggtcgca gcagaaggtg atgatgcagc cgatgccgat ggcatagccg
      121 ttgacggcgg cgatcaccgg cttggggaag tcgctcacca ggttggaggg gaaattgcgc
      181 gcgcggccga cacgcttgat gaaggcctcg gccgagcggg tgttgtgggt gttgggatcc
      241 ctgaggttgg cgccggcgga gaaggcgccg cccgcctcgt cgccggtcag gatgacggag
      301 cgcacgtcgt cgtcctcggc cgcctcgtcg agatgacgga tcagaccgtc ggcatagtcc
      361 tgaccccagc agttgcgggc cgcgggtcgg ctgagcgtca gaatgccggt atggccctgc
      421 tttcggtaga gaagcggcat gggttcctcc tcgcgttgtc cgttgtggca cccgggctgg
      481 cgtctggcta tgccgtgacg tccgccgcca gctcctggcg caagctcggc ttgtggatct
      541 tgccggtcgg cgtgcgcgga aattcagccg cagcgcgaaa agcgatccgt accggcacct
      601 tgtagctcgc cagtctttgg cggcagaagg cgatgatcgc tgccgtgtcg cgatcggccc
      661 cggcccgcag ctcgacagcg gcggcgacga tttcaccctt cagccggtcc gcgacgccga
      721 ccacatgggc ctgcacgata tcgggatgct cgagcaggac ctgctcgacc tccaacggcg
      781 cgacgttggc gccaccggtc ttgatcatct ccttcaggcg gccgcgaaac ctgatccgcc
      841 cgtcggcatc gatcgacccg agatcgccgg tcaggaaata gccgtcccgg tcgaacgcct
      901 cggcatcgag ctcgggtgcg cagaagtaac ccggcgtgac gtggccgcgc acggcaagct
      961 cgccgacgtc gcccggcggc aacggctggc gcgtgagcgg atcgacggtg cggatggtca
     1021 tgcccggcag cggcaggccc tggctgcgca agcgcagcgg caacgcatcg gcggcgtcgg
     1081 tgacggcgca attgccgtag gtctcggtcg agccatagac agtgcagagc tcgtcggcac
     1141 cgagcgcctg gatggtcatg gcgatgtctt ccggcgcgcc gatggtaagt ccggtccgca
     1201 tggcgcccag gcggcgctgg ggatgatcgg gatgctccag cagggcgcgc gccatgttgg
     1261 ccatgccgta gtagacgctg cagcgctcgc gctcgatcag cgccagagcc tcccccggct
     1321 cgaagctctc ctgcagcacg atacagccgc catgggtcat gatcgccggc agggcattgg
     1381 ccgaaccgaa cgaccagaac agcggcacgg cgagccacag ccggtcggtg gcgccaagat
     1441 gctgacgctc accgatcgcg aaggcattgg cgatcagcgg cccgtgcgcc agggtcacgc
     1501 ccttgggcgc cgctgtcgag cccgacgtgt acaggatgta gcagatgtcg gtcggcgcca
     1561 cggcctgctg cgccgcggcc agtgccacgg catcgaccgc tgcaccctgc gccaggaact
     1621 cggccagcga gaacacgccg gatcgcggcc ggccatccaa cgccacgacc gtgcgaaggg
     1681 acggcagccg cccgctcctg aggcggccgg cgtgcgcgct gtcgagctcg gggcagagct
     1741 cgcgcagcgg atcgaggaac ggccggccgc gaaacgcgtc gagcgttatc agggccgcgg
     1801 caccgcaatg ctcgagcgac cacgcaagct cgcgcggcgt cgagaaggtg ctgatggcca
     1861 cgacgatggc gccgatcctg gcggcggcga gggcggcgac gatccattcg gtcctgttcg
     1921 aggccagcag cgcgactcgg tcgccgtgac gaatgccgac cgccatgagg gcccgcgcga
     1981 agccatcgac ctcgaccttg aggccggcat aatcgagccg ctggtcgcga tacaccaccg
     2041 cgtccgccgc cggccgggcc gcggccatct cgtcgagcaa atgaccgagg gtgcggctca
     2101 ccgggcccgc gctcacgtca gcgtctccca tccgcccgac tcactcgtag cggggcggcc
     2161 gcttctcgcg gaaggcggcg atgccttcgg cgaaatgccg gcttgcccgc acgccgtcgc
     2221 cgagctgctg ctccagggcc tcgcgcgtca gcgcgtgatc ggcgatggtg gcgctgacct
     2281 gccgcttgac cgcctgcacc gccgaggggc tgttggccgc gatcatctcg gcggtctcga
     2341 tcgcccaacc catcaggcca gcgggctcga ccacgcggtt gaccaggccg agcctcgtcg
     2401 cctgctcggc atcgatcaat cgcgccgtca gcagcaggtc catggcgtgg acgtagccga
     2461 tctgctggat cagcttgatg gtcgagccgc cgaaaggata gatcgaccac ttcacctcgg
     2521 tcaggccaaa gcgcgcccgc ggcacggccg cgcgaatgtc ggtggccagc accagctcga
     2581 ggccgccgcc gatgcagtcg ccgttgatcg cggcgataat cggcttggaa taggcatcgt
     2641 tcttcagcaa ggcatggttg accatccgcg ccgtctcggg cccggccgac agatcgccgc
     2701 tgacatcggc gccgacggtg aaggcgcgct cgccggcgcc ggtcaggatg atgcagcggc
     2761 tgtcgtcgcg ttccaactcg tcccacaggc gccccagctc ggccagcatc gcccgcgtca
     2821 tggcgttgag ccgcggctgg ttgtcgatgg tcacgatggc gacatgccgg ccgtgccggt
     2881 cgaggcggat ctccatcacg cggcctccag ttcgaccacc accttgccgt gcgcccggcg
     2941 atcggtcagc aggcggatcg cctcgacgcc ccgctccagc ggcaggcgat gggttatgca
     3001 cggccagagc ttgccctcgc cgtaccagcg gaacagctcg tccaccgagc gcgccagctt
     3061 gtcgggcgca tgccagcgga aatagcgcag cgacgaaccc agggccgcac ggtgcttgac
     3121 aagcagacgg ttcgccggga tctgcggcac gccgccgacg aagccgatca gcaggatgcg
     3181 gccgccccag ccgagcgacg acaaggctgg gtcgaacagc gcgccaccga ccggatcgaa
     3241 gcagacatcg gcgcccttgc cgccggtcag cgccatgacc cgctcggtga gcggttcctt
     3301 cgcatagtcg atcgtggcgt ccgcgccatg ctcgacggcg acggcgagct tctccggcga
     3361 gctcgccgcg gcgatgaccc gcgcgcccat cgccttgccg atctccaccg cggtcaggcc
     3421 gacgccgccg gcggcgccca gcaccagcag ggtctcgccg gcctccagcc gtccctgcca
     3481 gcgcagggcg acgtggctgg agatgtagga gatgggaaag gcgccggcct cggcgaagct
     3541 catgccgtcg ggaatgaccc aggtttccgc caccggggcg acggcgaatt cggcaaggcc
     3601 gccatagggg aggatcgcca tcaccttgtc gcccgccttg aggccgcgcg cgccctcgcc
     3661 gcaggcggcg accacgcctg cggtctccag gcccgggctg aacggcagct ccggcttggt
     3721 ctgatagcgt ccggccacca tgatcgaatc ggcgtagttg accgcggtcg ccttgacctc
     3781 gatcagcacc tcgcccgccg cgggctgggg gaccggagct tcgcccagcg agagcccgtc
     3841 gatcccgccc cactgacggc agatcagcgc ccgcatggcg tgtcccttcc gattatagca
     3901 gcctcaccgc cgatgatggc cgacggcggt tcaacggggc aagcggattt gccgaccggg
     3961 agacctgact agggctttct tgccagcacg aaagccgaca ggccggccag ccggttgatc
     4021 gggaacatcg gcagttcggc ggcgcagatc gcccccagca ggccgttggc gaacgcgccc
     4081 tgtcggctga ggctgctgcg cggctcgtcg gaggaacgcg tggcaagccg cacggccgcg
     4141 gccaatggaa agaccaggcc gaaatagtaa gaaccgcgca ccacctcgag tccggcctgg
     4201 cgcatcgtcg cctcgatctc gccgagccga tagcgccgct tgtgctcgag gaagacatcg
     4261 tggccgctcc acaggaagcg gaaggccggc accgtcacca ggaaatgggc gcctgacggc
     4321 accttggcgg cgtagtggcg aaggagcccg cggtcgtcgt cgacatgctc cagcacgtcc
     4381 atcatcagca ccaggtcgca gtcggtcggg ccgctgtcgc ggcggtagag cacgggcttg
     4441 ccggccacgc tgtcgtcgcg ctcgctcgta tagccggtat cgacgcagag cgccgattgc
     4501 gcgccggtct cggccagcag atggcgcgag aagaagcccg agcctgcgcc gacatcgaga
     4561 atgtgacgtg gctgcaggcc ggccacggca cgacgcaacg ccgccgcctt cgaacggtaa
     4621 taccagtgcc ggccgatatc ggcgcccagg atgtcctctt ccttgaggtc catgtgtcag
     4681 gatttcggcg gctgggcggc cccgtcctcg tagactcctt cgatgacgta gatcggccgg
     4741 cccttgacct cgaggaagag gcgcccgaga tactcgccga tgatgccgag cgacaagagc
     4801 tggatggcgc ccatcagcag gacggcgatc aacagcgaag cgtagcctgg cgtgtcgatg
     4861 ccgaagatca gcacgcgcgt gacgatgaac agggcgtaga gcacggcgat ggcggcaatc
     4921 accacgccga catagaacca ggcgcgcagc ggcgccgtgg aaaagctcac cacgccgtcg
     4981 agggcgaagt tccacagccg ccacaggttg aacttgctcg cgccggcggc gcgcgccggc
     5041 cgctcgtagg gcacgccgac ggcattgaag ccgacccagg cgaacaggcc cttcatgaag
     5101 cggttgcgct cgggcagctg gcgcagcacc tcgatggcgc gccggtcgac caggcggaag
     5161 tcgccgacgt tctcggggat gcgcaccggc gacatcgagt tgaacacccg gtagaaccag
     5221 cccgccgaca ggcgcttggc ggcggtatcc cagctgcgca tggtgcgcac gccatagacg
     5281 acgtcgtagc cttcgcgcca gcgcgccatg aagggctcga tcaactcggg cgggtcctgc
     5341 aggtcgatat ccatcggcac gatgacgtcg ccgcgggcat ggtcgatgcc ggcggtcagc
     5401 gcggcctcct tgccgaaatt gcgcgacagg ttgacgatgc gcaagcggcg gtcggcgccg
     5461 ctgcggtcga gcaggtggcc cagcgtattg tcccgcgagc cgtcgttcac gaagacgatc
     5521 tcgaagcgca gcccgtcgcg ctccatcagg gcgggcaccg tatcgaggaa gatgtcgatc
     5581 gagtcctcct cgttgaacac cggcacgacc agcgacagca gcggatcggc cggccggcgc
     5641 gcgcgctgtt tgctaagctg gcgctccagg gcgctgccgt aacggtggga ggaggggagg
     5701 atcgattcgg gcacgaagag ggttccggtg aaacggt
//
LOCUS       DASWGA010000152         6972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1660290, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000152 DASWGA010000000
VERSION     DASWGA010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6972
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1660290"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..896
                     /gene="groEL"
                     /locus_tag="VF991_03740"
     CDS             <1..896
                     /gene="groEL"
                     /locus_tag="VF991_03740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEX9555580.1"
                     /translation="IVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDM
                     AILTGGQLISEDLGIKLENVTLDMLGKAKKVIVEKENTTIVDGAGKKADLEGRINQIR
                     AQIEETTSDYDREKLQERLAKLAGGVAIIKVGGATEVEVKEKKDRVDDAMHATKAAVE
                     EGIVAGGGAALLYSIRALEKLRVGNDDQKVGVEIVRRALQSPVRQIAENAGFDGAVVA
                     GKMLDQKDTNYGFDAQKGDYCDMVKSGIIDPVKVVRTALQDASSVAGLLVTTEAMVAE
                     KPEKKAPAMPPGGGMGGDMDF"
     gene            968..1390
                     /locus_tag="VF991_03745"
     CDS             968..1390
                     /locus_tag="VF991_03745"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX9555581.1"
                     /translation="MSPPPISVKAVLILKEHVLLLLNERGEWDLPGGRPDPGEDHRVA
                     LEREVREETGLLVEVGAALDEHLFEVLPGRIVRILPFACRLVGGSDVVLSPEHLETRW
                     LPLGELGLVIAGHPLPACYLGAIRQLIDQPRSPSARMV"
     gene            complement(1327..2400)
                     /locus_tag="VF991_03750"
     CDS             complement(1327..2400)
                     /locus_tag="VF991_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555582.1"
                     /translation="MADSGGGLAAYRAVGTLYNALMTALVLGLITRRGEETARDYVFR
                     HFRRQHLEKFLPGLQKLGLAGEPDAPACALYHYHSNALGGVKTGYLRESDKKAWVRYP
                     PPRWIWRGTAIAAVPHAVSAAMLHGWHGHNGVSLNNPGLGFVCTGMTVDGMPGLEGYY
                     LDYGRPLKEDERVRFAYGAEEMPRVDWANQPRLETANWPEERRQRTFRSYALEYLRTM
                     LPTLQELLGAAEAQTELGRVARLVGLQFHEETARDMDLPTDVERGDQQSAWDFARWLS
                     AILRAEGEDIETTERDGAVLVIQTGWRVARELALADPLKAFDAWNELWLGAAAAHDRF
                     LAVHTIRALGERGWSISWRIAPR"
     gene            complement(2393..2686)
                     /locus_tag="VF991_03755"
     CDS             complement(2393..2686)
                     /locus_tag="VF991_03755"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEX9555583.1"
                     /translation="MAAYLIVEVETTDEALMAEYRKHTPGLIAKFGGKFIVRGGKTRT
                     CEGDWKPSRVVVIEFPDYAAAERFYDSPDYKPVLDMRLRAGKSKAIIVDGHNG"
     gene            complement(2698..3561)
                     /locus_tag="VF991_03760"
     CDS             complement(2698..3561)
                     /locus_tag="VF991_03760"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEX9555584.1"
                     /translation="MAQSAALISTEELARRLGAPALRVFDCTTYLRPRPEGGYNAESG
                     RANYDKGHIPGAAFLDLGAELSEPSSRLRFTLPPLGELTKTFAAKGIGHGTFVVLYSH
                     ATPTWATRLWWMLRAVGFDEAAVLDGGLDKWKAENRPLSTEPTTYPPATLALRGRPEI
                     FVDRNDIKGAIGKTDTLTLNALSHDQHKGTGGVTYGRPGRIAGSSCVPASSLFGADKT
                     FKPIGELRAAFEGVGAAPDKRVLVYCGGGIAATLDAFVLTALLGHNNVSVYDNSMQEW
                     SNDPSLPMETG"
     gene            complement(3623..4006)
                     /locus_tag="VF991_03765"
     CDS             complement(3623..4006)
                     /locus_tag="VF991_03765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555585.1"
                     /translation="MRLLIASMAALAAVAFAAPSFAQQEDPAAAPAPVPTAKPKPGTA
                     AYCQKLKSSSSRSSCMKKLHAQAAPKAAPTTTKKAKKSTTTPAAARPADVGQLAPPPA
                     ATASTPAPAPTGGTVAIPPLPQKTI"
     gene            4219..4665
                     /gene="mscL"
                     /locus_tag="VF991_03770"
     CDS             4219..4665
                     /gene="mscL"
                     /locus_tag="VF991_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEX9555586.1"
                     /translation="MLQEFKKFAMRGNVVDLAIGVIIGAAFGKIIDSLVNDLMMPVIG
                     RLVGGLDFTNYFIGLTPAASQAPTYDAAKKAGAALGYGNFITVTINFLIIAWILFLVV
                     RGLNRMFREEAAAPPPPAPPTKEQELLTEIRDLLRAQVTAQPSSRA"
     gene            complement(4675..5559)
                     /gene="dapA"
                     /locus_tag="VF991_03775"
     CDS             complement(4675..5559)
                     /gene="dapA"
                     /locus_tag="VF991_03775"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEX9555587.1"
                     /translation="MTAKISGLWLPLITPFKDGAVDFSSYERLIEHYLALGVDGLFPL
                     GTTGESPALDEAETDELVERTVAKVAGRVPVFVGVGGNATRKVEKALRRLERLAFDGI
                     VSVCPYYNRPSQDGLLAHFRAIAAATDRDVLIYNIPYRTAVNLLNDSLLELAEVPNIV
                     GVKDSSGILAQSLELLARKPADFSVLTGEDALYFTMMANGADGGILASSHLLTGRFVE
                     VGKRFAANDVAGARAAWAPLAAFVPLLFAEANPMPIKYLLWRQGLIASPECRLPLTRI
                     SDGLARRLDAATSERRAA"
     gene            5765..6682
                     /locus_tag="VF991_03780"
     CDS             5765..6682
                     /locus_tag="VF991_03780"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9555588.1"
                     /translation="MRKDLDIALIRAFLAVVEAGGVTRAAASLGVSQAAASQQIKRLE
                     DALDCRLFEREGRRLVLGPAGERLLAQARRLLALNDEVWSSMRTPSFEGEVRLGVPYD
                     IIANFVPAILRRFAKAQPRVRVSLVCEDSKVVREQLRSGGVDLALTTETECGRHGETL
                     RTDRLVWVGVPDGDAHLKDPLPVSLGAPTCVFRPVAIEALGKARRDWRAVCEVSRLEP
                     VHAVIEAGLAVAPLLRSSVPERFEIFDGKAAREARLPALPEFRINLYAPPGLSPAARD
                     LADHVRARFAGGPRRANAAPERAGRPALR"
     gene            6739..6957
                     /locus_tag="VF991_03785"
     CDS             6739..6957
                     /locus_tag="VF991_03785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555589.1"
                     /translation="MRFLLGWLVKLGFLAVVYLTMTGNVKVKLPETVMGYEVPPVARQ
                     WVDRNAQINDIARQTQDGFNQISDSFKQ"
BASE COUNT         1111 a         2288 c         2425 g         1148 t
ORIGIN      
        1 tgatcgtggc cgaggacgtc gagggcgagg cgctggccac cctggtcgtc aacaagctgc
       61 gcggcgggct aaaaatcgcc gccgtcaagg cgccgggctt cggcgatcgc cgcaaggcga
      121 tgctcgagga catggcgatc ctgaccggtg gtcagctgat ctccgaggac ctcggcatca
      181 agctcgagaa cgtcacgctc gacatgctcg gcaaggccaa gaaggtcatc gtcgagaagg
      241 agaacaccac gatcgtcgac ggcgccggca agaaggccga cctcgagggc cgcatcaacc
      301 agatccgcgc ccagatcgag gagaccacct cggactacga ccgcgagaag ctccaggagc
      361 gcctggccaa gctcgcgggc ggtgtcgcca tcatcaaggt cggcggcgcc accgaggtcg
      421 aggtcaagga aaagaaggac cgcgttgacg acgccatgca cgccaccaag gcggcggtcg
      481 aggaaggcat cgtcgccggc ggtggcgcgg cgctcctcta ctccatccgc gccctggaga
      541 agctgcgcgt cggcaacgac gaccagaagg tcggcgtcga gatcgtgcgc cgcgcgctgc
      601 agtcgccggt ccgccagatc gccgagaacg ccggcttcga cggcgcggtg gtcgcgggca
      661 agatgctcga ccagaaggac accaactacg gcttcgacgc ccagaagggc gactactgcg
      721 acatggtgaa gtccggcatc atcgatccgg tcaaggtcgt gcgcaccgcc ctacaggacg
      781 cctcctcggt ggcgggcctc ttggtgacga ccgaagccat ggtcgccgag aagccggaga
      841 agaaggcgcc ggcgatgccg ccgggcggcg gcatgggcgg cgatatggac ttctaagtcc
      901 agccgtcttc tgaaagttgc ggaagggccg gggagcgatc cccggccttt tcttttatgg
      961 tcggcgcatg agcccaccgc cgatctccgt caaagccgtc ctgattctca aggaacacgt
     1021 gctgctgctc ctgaacgagc gtggcgagtg ggatctgccg ggcgggcggc cggatccggg
     1081 cgaagaccac cgtgtcgcgc tcgaacgcga agtgcgcgag gagacggggc tgttggtcga
     1141 agtcggcgcc gccctcgacg agcacctgtt cgaggtgctg ccggggcgca tcgtgcgcat
     1201 cctgccgttt gcctgccggc tggtgggcgg cagcgacgtc gtgcttagcc ccgagcatct
     1261 cgaaacgcgc tggttgccgc tcggcgagct cggcttggtc atcgccggcc atccgctgcc
     1321 ggcctgttac ctgggcgcga tccgccagct gatcgaccag ccgcgctcgc ccagcgcgcg
     1381 gatggtgtga accgcgagga accggtcgtg cgccgccgcg gcgccgagcc acagctcgtt
     1441 ccaggcatcg aaggctttta agggatcggc gagcgcgagc tcgcgcgcga cccgccagcc
     1501 ggtctggatc acgaggacgg cgccgtcgcg ctccgtcgtc tcgatatcct cgccttcggc
     1561 ccgcaggatg gccgacagcc agcgcgcaaa atcccaggcg ctttgctggt cgccgcgctc
     1621 gacgtcggtc ggcaggtcca tgtcgcgcgc cgtctcctcg tggaactgca ggccgaccag
     1681 gcgggccacc cggcccagtt cggtctgcgc ctcggccgcg cccaaaagct cctgcagggt
     1741 cggcagcatg gtgcgcaggt attccagtgc ataggagcgg aaggtgcgct ggcggcgctc
     1801 ctcgggccag ttcgcggtct cgagccgcgg ctggttggcc cagtcgaccc gcggcatctc
     1861 ctccgcgccg taggcgaaac gcacgcgctc gtcttccttc agaggccggc cgtagtcgag
     1921 atagtagcct tcgaggcccg gcatgccgtc gaccgtcatg ccggtgcaga cgaagcccaa
     1981 gccggggttg ttgagcgaga ctccattgtg gccgtgccag ccgtgcagca tcgccgccga
     2041 caccgcatgc ggcacggcgg cgatcgccgt gccgcgccag atccagcgcg gcggcggata
     2101 gcgcacccag gcctttttgt cgctttcgcg caggtagccc gtcttcaccc cgcccagcgc
     2161 gttggaatga tagtgataga gcgcgcaggc cggcgcgtcg ggctcgccgg cgagccccag
     2221 cttctgcaga ccgggcaaga acttctccag gtgctggcgg cggaaatggc ggaacacata
     2281 atcgcgcgcc gtctcctcgc cgcggcgcgt gatcaggccc agcaccaggg ccgtcatcaa
     2341 tgcattgtag agggtgccga ccgcgcgata ggcggccaag ccacccccgg agtcagccat
     2401 tatggccgtc gacgatgatc gccttggact tgcctgcgcg cagccgcatg tcgagcaccg
     2461 gcttgtagtc cggcgaatcg tagaagcgct cggccgcggc gtagtcgggg aactcgatca
     2521 ccaccacgcg cgagggtttc cagtcgccct cgcacgtccg ggtcttgccg ccgcgcacga
     2581 tgaacttgcc gccgaacttg gcgatcaggc cgggcgtatg cttgcggtat tcggccatca
     2641 aggcctcgtc ggtcgtctcg acctcgacga tcaggtaggc ggccacgtct tcctccttca
     2701 accggtctcc atcggcaggc tgggatcgtt ggaccattcc tgcatggagt tgtcgtacac
     2761 cgagacgttg ttgtggccca acagcgcggt cagcacaaac gcatcgagcg tggcggcgat
     2821 gccgccgccg caatagacca gcacccgctt gtcgggcgcg gcgcccacgc cctcgaaggc
     2881 ggcgcgcagc tcgccgatcg gcttgaatgt tttgtcggcg ccgaacaggc tcgacgccgg
     2941 cacgcacgac gagccggcga tgcggccggg ccggccgtag gtgacgccgc ccgtgccctt
     3001 gtgctggtcg tggctgagcg cattcaaagt cagcgtatcg gtcttgccga tcgcgccctt
     3061 gatgtcgttc ctgtcgacga agatctcggg ccggccgcgc agcgcaagcg tcgccggcgg
     3121 ataggtcgtg ggctcggtgc tgagcgggcg gttctccgcc ttccatttgt cgagcccacc
     3181 atcgagcacc gccgcctcgt cgaagcccac cgcgcgcagc atccaccaca ggcgggtcgc
     3241 ccaggtcggc gtggcgtggc tgtacagcac cacgaaggtg ccgtggccga tgcccttggc
     3301 agcgaacgtc ttggtgagct cgccgagcgg cggcagggtg aagcggagcc tggaggacgg
     3361 ctcggacagc tcagccccga gatcgaggaa ggcagcgccg gggatgtggc ccttgtcgta
     3421 gttggcgcgg ccgctttcgg cgttatagcc gccttccggc cgcggccgga gataggtcgt
     3481 gcagtcgaag acgcgcagcg ccggggcgcc caggcggcgc gcgagttcct cggtcgaaat
     3541 cagcgcagcg gattgagcca tggtgctctc cttcggtgaa ggaggagagc ttaaccgtcg
     3601 tcccgagcgg tgcgaagtgg cgctagatcg tcttctgcgg cagcggcggg atggcaaccg
     3661 tgccgccggt cggcgcgggt gccggcgtcg aggccgtggc ggccggcggc ggggcaagct
     3721 ggccgacatc ggccggcctg gctgccgcgg gtgtcgtcgt cgacttcttg gctttcttgg
     3781 tcgtggtcgg cgctgccttg ggcgccgctt gggcgtgcag cttcttcatg caggagctgc
     3841 gcgaggagct gcttttcagt ttctggcagt aggcggccgt gccgggcttg ggcttggcgg
     3901 tcggcaccgg ggccggcgcc gcggcggggt cttcctgctg ggcgaacgag ggggcggcaa
     3961 aggcgaccgc agccagggcc gccatgctgg cgatcaacag acgcatcgga acttctcccg
     4021 ggccgcttgc ggagggggac ggtgcggcct cgacttaccg gcaaaaggtt atggtatttg
     4081 tggcgtttat gtcaaattct taatcgttta cagcaacctc gggccggtcc tttcggtgca
     4141 acctcggcct tctcggtggt cacggtttct gctttgctgc tgtggctgcg catgacctga
     4201 aagccgcgga gggtggagat gctccaggaa ttcaagaagt tcgcgatgcg tggcaacgtc
     4261 gtcgatctcg ccatcggcgt catcatcggc gccgccttcg gcaagatcat cgactcgctg
     4321 gtcaacgatc tcatgatgcc ggtgatcggc cgcctcgtcg gtgggctcga cttcaccaat
     4381 tatttcatcg gcctgacgcc cgccgccagc caggcaccga cctatgacgc cgccaagaag
     4441 gccggcgccg cgctgggcta cggcaacttc atcaccgtga cgatcaactt cctgatcatc
     4501 gcctggatcc tgttcctggt ggtgcgcggc ctcaatcgca tgttccgcga ggaagcggcc
     4561 gccccgccgc cgcccgcgcc gccgaccaag gagcaggagc tgctgacgga gatccgggat
     4621 ctgttgaggg ctcaggtgac agcgcagcca tcatcccgag cgtagcgagg gactttaggc
     4681 cgctcgtcgc tcgctggtcg cggcgtccag ccgccgcgcc agcccgtctg aaatccgcgt
     4741 cagcggcagg cggcattccg gcgaagcgat caggccctgg cgccacagca gatacttgat
     4801 cggcatggga ttggcctcgg cgaataggag cggcacgaag gcggccagcg gcgcccaggc
     4861 ggcgcgcgcg ccggcaacgt cgttggcggc aaagcgcttg ccgacctcga cgaaccgtcc
     4921 ggtcaaaaga tggctcgacg ccaaaatgcc gccgtcggcg ccgttggcca tcatggtgaa
     4981 atagagtgca tcctcgccgg tcaggaccga gaaatccgcg ggcttgcgtg ccagaagctc
     5041 gagcgattgg gcgaggatgc ccgaactgtc cttgacgccc acgatgttgg gaacctccgc
     5101 gagctcgagc agcgagtcgt tcaaaaggtt caccgcggtg cgatagggaa tgttgtagat
     5161 cagcacgtcg cggtcggttg ccgcggcgat ggcgcggaag tgcgctaaaa ggccgtcctg
     5221 gctcggccgg ttgtagtagg ggcagaccga gacgataccg tcgaacgcca agcgctccag
     5281 ccgccgcagc gccttctcga ccttgcgtgt ggcattgccg ccgacgccca cgaacaccgg
     5341 cacgcggcct gcgaccttgg ccaccgtccg ctcgacgagc tcgtcggtct cggcctcgtc
     5401 gagcgccggc gattccccgg tggtgccgag cgggaacagg ccgtccacgc cgagggcgag
     5461 gtagtgctcg atcagccgtt cgtagctgga aaaatcgacg gcgccatcct tgaacggcgt
     5521 gatgagcggc agccagaggc cggagatttt cgcggtcatg catcctccgt cgtgttcctc
     5581 tccccttcct cctcatgttc ctctcccccg ttgggggaga ggctaggtga gggggcgaga
     5641 acgtgcgtaa ccccctcacc caacctctcc cccaagcggg ggagaggagg aagaaacgag
     5701 agggtaggct tccggaataa ataacaaaaa cgaatgtttc tgatataaac gttcacattc
     5761 cattatgcgt aaagacctcg acattgccct catccgcgcc ttcctcgccg tcgtcgaggc
     5821 gggcggcgtg acgcgcgcgg cggcctcgct cggcgtcagc caggcggcgg ccagccagca
     5881 gatcaagcgc ctggaagacg cgctcgactg ccggctgttc gagcgcgaag gccggcggct
     5941 ggtgctgggg ccggcgggag agcggctgct ggcccaggcg cgccgcctgc tggcgctgaa
     6001 cgacgaggtc tggtcgtcga tgcgcacgcc gtccttcgag ggcgaggtgc gccttggcgt
     6061 gccctacgac atcatcgcga acttcgtgcc cgccatcctg cgccgtttcg ccaaggccca
     6121 gccgcgcgtg cgcgtcagcc tggtgtgcga ggactccaag gtggtgcgcg agcagctgcg
     6181 ctcgggcggc gtcgatctcg cgctcaccac cgagaccgag tgcggccgcc acggcgagac
     6241 cttgcgcacc gaccggctgg tctgggtcgg cgtgccggat ggcgatgcgc atctcaaaga
     6301 ccccttgccg gtgtcgctcg gcgcgccgac ctgcgtattc cgtccggtcg ccatcgaggc
     6361 gctgggcaag gcgcggcgcg actggcgggc ggtctgcgag gtgagccggc tcgagccggt
     6421 ccatgccgtg atcgaggcgg ggctggcggt ggcgccgctg ctgcgctcgt cggtgcccga
     6481 gcgcttcgag atcttcgacg gcaaggcggc ccgcgaggcg cgcctgccgg cgctgccgga
     6541 gttccgcatc aacctctacg ccccgcccgg cctcagcccc gccgcgcgcg acctcgccga
     6601 tcatgtgcgc gcgcgttttg ccgggggacc gcggcgcgcg aacgccgctc ccgagcgggc
     6661 cgggaggccg gcgctgcgat gaacaattga taccatccgg cgctgtcttg gcggcgccgc
     6721 tgcaactacc ttgtgggcat gcgctttctg ctcggatggc tggtcaagct gggtttcctg
     6781 gccgtggtct atctgaccat gaccggcaac gtgaaggtca agttgcctga gaccgtgatg
     6841 ggctacgagg tgccgccggt ggcgcggcaa tgggtcgatc gcaacgcgca gatcaacgac
     6901 atcgccaggc agacccagga cggcttcaat cagatttccg acagtttcaa gcagtaagac
     6961 gagggggcgg gg
//
LOCUS       DASWGA010000153         2353 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2046942, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000153 DASWGA010000000
VERSION     DASWGA010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2046942"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VF991_03790"
     CDS             <1..264
                     /locus_tag="VF991_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9555590.1"
                     /translation="NLKPDDGAVFAACQKLYDGLAAKGIEALHDDRDLRPGAKFADMD
                     LIGTPWQVIVGPKGLAAGKAELKDRKTGKREELPLDQVAQRFG"
     gene            282..1595
                     /locus_tag="VF991_03795"
     CDS             282..1595
                     /locus_tag="VF991_03795"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9555591.1"
                     /translation="MAFAAVERLLAVRYLRARREEGFISVIAGFSLVGITLGVGTLIV
                     VMAVMNGFRVEMLRQMSSISGQLGIHGGRDGLIATPDLLARIRAVPGVMSATPTIEGQ
                     VMAVAGDRVRGVVLRGMEPDDFRARTPLAAAIEGPPEIRDRYRAQCRGEGDKSVDWGS
                     LKGFGDEFSVAIGRRLADLMGVKVGDSLQLVSPVSVATPLGVMPRSATARVAAVFCAG
                     MYDYDANFVYTPLSAAQRLLDLGGKITGIEVFLADDASVGTARRLVSQVVGTQAWVFD
                     WLQANFGFFSAIQAQTNVMFLVLTMIVLVAAFNIVSSLVMLVRTKTADIAILRTMGAS
                     RGAILRIFLLDGLAIGGVGTLLGVVLGLAFARNIEAIRQWLQHSFDIVLFDETLYLLA
                     ELPSRIEWTDVAAIGGMALVFALLASLYPAARAARLDPVEGLRRE"
     gene            1588..>2353
                     /locus_tag="VF991_03800"
     CDS             1588..>2353
                     /locus_tag="VF991_03800"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9555592.1"
                     /translation="MSDSAPAVERWLAWRYLATRQREGFVSFIAIFSLIGVALGVATL
                     IVVLSVMGGFRQQLLSRIIGMNGHVVITARDGILQATPDLLARVEGFPGVSRFHQTLE
                     RQALITANGQTRGALLRGVRPEDLAMRVAGNVVAGDLGAFGTRPGVVMGERLRQALNV
                     RPGDKVTLVTHRLNENGTIAPRYTDYEVLASFLTRRYEFDNSLVFVPLAMLRDDLEYA
                     DQAVSSIELDIVDPAAAPRVAEALRESLKSDDLRIAD"
BASE COUNT          345 a          809 c          779 g          420 t
ORIGIN      
        1 aacctcaagc ccgacgacgg cgcggtgttc gcggcctgcc agaagcttta tgacgggctt
       61 gccgccaagg gcatcgaggc gctgcacgac gatcgcgacc tgcgacccgg cgccaagttc
      121 gccgacatgg acctgatcgg cacgccctgg caggtgatcg tcgggccgaa gggactggcg
      181 gccggcaagg ccgagctcaa ggaccgcaag accggcaagc gcgaggagtt gccgctcgac
      241 caggtcgctc agcggttcgg ctgagctgga gcacggcgat catggctttc gccgccgtcg
      301 agcgcctcct cgccgtccgc tacctgcgcg cccgccgcga ggagggcttc atctcggtca
      361 tcgccggctt ctcgctggtc ggcattaccc tcggcgtcgg gaccttgatc gtggtcatgg
      421 cggtgatgaa cggctttcgc gtcgagatgc tgcgccagat gtcgagcatc agcggccagc
      481 tcggcatcca tggcggccgc gacgggctta tcgccacgcc cgacctgttg gcgcgcatcc
      541 gcgccgtgcc cggcgtgatg tcggcaacac ccaccatcga gggccaggtc atggcggtgg
      601 ccggcgaccg cgtgcgcggc gtggtgctgc gcggcatgga gcccgacgat ttccgcgcgc
      661 gcacgccgct tgccgccgcg atcgaaggac cgccggaaat ccgcgatcgc tatcgagccc
      721 agtgccgggg cgagggcgac aagtccgtcg actggggcag tctgaagggt ttcggcgacg
      781 aattttccgt cgcgatcggc cggcggcttg ccgacctcat gggcgtcaag gtgggcgaca
      841 gcctgcagct cgtctcaccg gtttcagtcg ccacgccgct tggcgtcatg ccgcgctcgg
      901 cgacggcgcg ggtggcagcc gtcttctgcg ccggcatgta cgactacgac gccaatttcg
      961 tctacacgcc actcagcgcc gctcagcgcc tgctcgatct cggcggcaag atcaccggca
     1021 tcgaggtgtt cctggccgac gatgcctcgg tcgggaccgc gcgccggctg gtctcgcagg
     1081 tcgtcggcac gcaagcctgg gtgttcgact ggctgcaggc caatttcggc ttcttctcgg
     1141 ccatccaggc acagaccaac gtgatgttcc tggtgctgac catgatcgtg ctggtcgccg
     1201 ccttcaacat cgtctccagc ctggtcatgc tggttcgcac caagaccgcc gatatcgcca
     1261 tcctgcgcac catgggggca agccgcggcg ccatcctgcg gatcttcctg ctcgatgggc
     1321 tggcgatcgg cggcgtcggc accctgctcg gggtcgtgct cggcctggcc ttcgcccgca
     1381 acatcgaggc gatccgccag tggctgcagc atagcttcga tatcgtcctg ttcgacgaaa
     1441 cactttacct gctggccgaa ctgccctcgc gcatcgaatg gacggacgtc gccgcgatcg
     1501 gcggcatggc gcttgtcttc gcgctgctcg cctcccttta tcccgcggcg cgggcggccc
     1561 ggctcgatcc ggtggagggc ctgcgtcgtg agtgacagcg cacccgccgt cgaacgctgg
     1621 ctcgcctggc gctacctcgc gacgcgccag cgcgaaggct tcgtctcctt catcgccatc
     1681 ttctccctga tcggcgtggc gctgggtgta gccaccctga tcgtcgtgct gtcggtgatg
     1741 ggcggttttc gccagcaact tctcagccgc atcatcggca tgaacggcca tgtcgtcata
     1801 accgcccgcg acggtatcct gcaggcgaca ccggatctgc tggcgagggt cgagggtttt
     1861 ccaggagtct cgcgcttcca tcagaccctc gagcgccagg cgctgatcac ggccaacggc
     1921 cagacacgcg gcgcgctgtt gcgcggcgtg cgccccgaag accttgcgat gcgcgtggcc
     1981 gggaacgtcg tggccggcga tctcggtgcc ttcggcacca ggccgggggt cgtcatgggc
     2041 gaacgcctgc gccaagcgct gaacgtccgc ccgggagaca aggtcaccct ggtcacgcac
     2101 cgtttgaacg agaatggcac gatcgcgccg cgctataccg actacgaagt gctggcgagc
     2161 ttcctgacgc gccgctacga gttcgacaat tcgttggtct tcgttcccct ggccatgctc
     2221 cgcgacgatc tcgaatacgc cgaccaggcg gtgagctcga tcgagctcga catcgtcgac
     2281 ccggcggcgg cgcctcgcgt ggccgaggcg ttgcgcgagt ccctgaaaag cgacgatctc
     2341 aggattgccg act
//
LOCUS       DASWGA010000154         6250 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_905157, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000154 DASWGA010000000
VERSION     DASWGA010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6250
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_905157"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..890)
                     /locus_tag="VF991_03805"
     CDS             complement(27..890)
                     /locus_tag="VF991_03805"
                     /inference="COORDINATES: protein motif:HMM:NF013353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEX9555593.1"
                     /translation="MTAQPSKYRFLLINAFSLAPGNDFQMRSFSGPKETQVYNYEDVK
                     PFLADIDWDLHPGARATHGNWPVTTKQAFMSVGNNRLPLVREACAGGKYNAIVLLGGG
                     DPGYMEAREIGREHRIPVTSSAHAQMHVAGLLGNKFSIVDIAETHNMQMYHLVVQYRM
                     TDRCASIRNVNYPLPNPNFPNDRPIQTECERALRGEPSGMLDAAAQESIAAIEEDGAE
                     VILLGCSAAFWLQPLLQKKLGEIGWDVPVLEGFRCAIEVAKTLVDLGVDASGLAFPAE
                     RPSKWRRKKVF"
     gene            983..1825
                     /locus_tag="VF991_03810"
     CDS             983..1825
                     /locus_tag="VF991_03810"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9555594.1"
                     /translation="MIAHTFTASDGLELAYYVDDNTDPWADAPTLLMLHAAMGNAERF
                     YAWVPMLSRHYRVVRLDLRGHGNSATPAPDSAFDMDRLVRDTLELLDLLGCKSAHVVG
                     NSAGGYIGQNLAMGHPARVKSLILFGSTPGLRNSQAATWIPRIASDGIRKFLMDTIED
                     RFVPGTDPRKIEWFVSCATKCDPAYVGRFVGLMSSLDWSDHLGEIKCPTLLVIPGAET
                     VGSIKNYDVMRERIGDVQLIAYEGLPHNIGEAVPERCAEDVLAFLRWRFGLPSPALHV
                     AKPH"
     gene            2184..3032
                     /locus_tag="VF991_03815"
     CDS             2184..3032
                     /locus_tag="VF991_03815"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX9555595.1"
                     /translation="MTALTSAEVERYRHDGFLFPFPALSEPERATCLAGLERYERWLG
                     TTVPQADLKWRTQPHALLPWYADLARHPRILDVVEDLIGPNILVWTGTFFIKEAASPT
                     FAAWHQDSTYFGLEPDEQVTAWVALTDASQEAGCMEVLSAHGAPRQMHHAALRLKDSI
                     NRTGQTITEPLDETGATMMQLSAGSFSLHHTFCVHRSAPNRAAHRRIGMGINYIPAHV
                     RPTGPVRMSAMLARGTDKWGHFDLFEPPTVEFDTATHGLVYDRYAENYREQVKRHESL
                     FAPERV"
     gene            3036..3515
                     /locus_tag="VF991_03820"
     CDS             3036..3515
                     /locus_tag="VF991_03820"
                     /inference="COORDINATES: protein motif:HMM:NF020243.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555596.1"
                     /translation="MKGKCALITGSTQGLGYAMAQRFAAEGCHIVLNGLGDKAEIEHK
                     RRQLESEHGVRVLHHSADLADPGQIADLVETAQRIFGAVDILINNALAPAKTPQAVVD
                     KLHAEIVKALQNPDIKELLSKQAMQPVGNTPQEFAAFLAKDIAMWKEVATMANVSVE"
     gene            complement(3540..4535)
                     /locus_tag="VF991_03825"
     CDS             complement(3540..4535)
                     /locus_tag="VF991_03825"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX9555597.1"
                     /translation="MKFSISLPTGFEGVMYKIPFVEPGDFVRMAQLCEKLGYDSVWGN
                     DHITSQHYVRELFPDRAPNFYELLTVLSFCAAATSRIRVGTALAVLPMRDPFWLAKQS
                     ATIDQLSGGRLVLALGIGAYREEFAAWAPRLAPQARRGEMMDEGLELMRRLFSERRVT
                     HQGKYYAVRDLEMYPKPKRQPFALWLGGHNMATVERAARFATGWLPGWRPWPELEERI
                     KTLKARAAELGRDPAEIEIAPQFSLTIAKTPEEAERRYMASGLVAHRKSLAYTGRDLS
                     KQVVANLVGSPDLIREKVEGLKKIGVDHACALMIPADSMAEFEDQVEWFAKTVLS"
     gene            complement(4532..5500)
                     /locus_tag="VF991_03830"
     CDS             complement(4532..5500)
                     /locus_tag="VF991_03830"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9555598.1"
                     /translation="MAEFGIAMDGRAPVADIPAQARAAEQGGASTLWIACHLYLRDPI
                     TMAALALGATRRIKIALMAMSPYSVHPVFIAMAAATLEEIYPGRVILCLGVGAPADLK
                     AAGIGAPRPLKTIAEAIAICRSLLAGEMTEFNGQVFQVSGRRLASGARNVPIVLAASR
                     PNMLQLAGRATDGVLISAATSPPFVKACLAQAAEAAGGRPFRKLGIVYTRLGATEKEG
                     IDPIRRPIGFVLRGAHHAENIRLSGARLDQAVLAAAYAAENWREVDRLVSDDVVRLHA
                     ACGTPAQVKARLEEYRAFGLDEVIIGGMDDVPSISAALAAARGDRP"
     gene            complement(5493..>6250)
                     /locus_tag="VF991_03835"
     CDS             complement(5493..>6250)
                     /locus_tag="VF991_03835"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX9555599.1"
                     /translation="QMRAYGAMVVTVEDKADRWRLQSACVRQLGWYPTSPFFGPVVGS
                     NPYGMEGYKTIAFEIAEAFDWEVPDWCVLPVCYGDALFGMWKGFEELKALGWIDRTPR
                     LVAAEVSGSITAALASGEPMPPDRPRNAPSIATSIGASQGTVQALEVLRRSGGTALTI
                     ENDELARWVVTLGAKEGIWPEPASAAPFAAIERLRANGVIAPDARVVALLTASGLKDT
                     AVIQDALPPAPVVTGGLPEVMKALRDVYGFADG"
BASE COUNT         1062 a         2111 c         2072 g         1005 t
ORIGIN      
        1 tcgctaaccg tcgtcctgac agccgtctaa aacactttct tgcgccgcca tttggatgga
       61 cgttcggcgg gaaaggcaag gccgctggcg tcgacgccga gatcgaccaa tgtcttggcg
      121 acctcgatgg cgcagcgaaa gccttctagc acggggacgt cccagccgat ctcgccgagc
      181 ttcttctgca ggagcggctg cagccagaag gccgcggaac agccgagcag gatgacctcg
      241 gcgccgtctt cctcgatggc ggcgatcgat tcctgcgccg ctgcatcgag catgcccgaa
      301 ggctcgccgc gcaaggcgcg ctcgcactcc gtctggatcg gacgatcgtt gggaaaattc
      361 gggttgggca gcggatagtt gacgttgcgg atcgaggcgc agcgatcggt catgcggtac
      421 tgcacgacca gatggtacat ctgcatgttg tgggtctcgg cgatgtcgac gatgctgaac
      481 ttgttgccca aaagtcccgc gacatgcatc tgggcatgtg cgctcgaagt gacgggaatg
      541 cggtgctcgc ggccgatctc gcgcgcttcc atgtagccgg gatcgccgcc gcccagcagc
      601 acgatggcgt tgtactttcc gccggcgcag gcttcgcgca ccaacggcag gcggttgttg
      661 ccgaccgaca tgaacgcctg cttggtcgtg accggccagt tgccgtgggt ggcacgagcg
      721 ccggggtgga gatcccagtc gatgtcggca agaaagggct tcacgtcctc gtagttgtag
      781 acctgcgttt ccttcgggcc ggaaaacgac cgcatctgga aatcattgcc gggcgccagg
      841 ctgaaggcgt tgatcagcag gaaacgatat ttgctcggct gggcggtcac gatggtcccc
      901 tctcattcgg ctgcgcgcgc gagcttgcag gaggtggcat cgctgtcaat gccatggcac
      961 ggtccaagac cgaggagagc agatgattgc gcacaccttc accgccagcg acggcctgga
     1021 gctcgcctac tacgtcgacg acaacaccga cccgtgggcc gacgcgccga cgctcctcat
     1081 gctgcatgcc gccatgggca acgccgagcg gttctatgcc tgggtgccga tgctgtcgcg
     1141 ccactaccgc gtcgtgcggc tcgacctgcg cggccacggc aactccgcga cgccggcgcc
     1201 ggatagcgcc ttcgacatgg accggctggt cagggacacg ctcgagctgc tggatctttt
     1261 aggctgcaag agcgcccacg tcgtcggcaa ctcggccggc ggctacatcg gccagaacct
     1321 cgccatgggc catcccgcac gggtgaagag cctgatcctg ttcggctcca cgcccggcct
     1381 gcgcaacagc caggccgcga cctggatccc gaggatcgcg agcgacggca tccggaaatt
     1441 cctgatggac acgatcgagg accgcttcgt gccgggcacc gatccgcgca agatcgaatg
     1501 gttcgtctcg tgcgcgacca agtgcgatcc cgcctatgtc ggccgcttcg tgggcctgat
     1561 gtcctcgctc gactggagcg atcaccttgg cgagatcaag tgtcccaccc tgctcgtcat
     1621 cccgggcgcg gagacggtgg gctcgatcaa gaactacgat gtcatgcgcg agcgcattgg
     1681 cgatgtgcag ctcatcgcct acgagggctt gccgcacaat atcggcgagg cggtgcccga
     1741 gcgctgcgcc gaggacgtgc tggccttcct gcgctggcgc ttcggcctgc cgtcgccggc
     1801 gctccatgtc gccaagccgc actgagcagc ggcggctgcg atgcgcacaa agtcacttct
     1861 ccccgtcttc gggtagggct atcgcatttg atcatctatt ccgtcatccc gagcgaagcc
     1921 gcccagcggg cggcgtagcc gagggacctc ttcttgtcgg cggggccacg aagaataggt
     1981 ccctccgctg cgcctcgctg cgctcggctc cggtcgggat gacggaagtt tttgatcaca
     2041 tgcgatagcc ctacgtcttc gggggaggtg ctcgcggctc agcatgctcg ccaaggacga
     2101 ccacaacaat gtgctggcgt cgagtgctgg ccgctgccaa cctttcctcc agtggcagca
     2161 gaaccacgcg cgcggaggaa gacatgacgg cgctgacatc ggccgaggtc gagcgctacc
     2221 gacacgacgg ctttctgttt ccctttccgg cgctcagcga accagagagg gcgacctgcc
     2281 tggccggcct cgagcgctac gaacgctggc tcggcacgac ggtgccgcag gccgacctca
     2341 agtggcgcac gcagccgcat gccctgctgc cgtggtacgc cgatctcgcg cgccatccgc
     2401 gcatcctcga cgtcgtcgag gacctgatcg gcccgaacat cctggtgtgg accggcacgt
     2461 tcttcatcaa ggaggccgcg tcgccgacct tcgcggcctg gcatcaggat tcgacctatt
     2521 tcggcctcga gccggacgag caggtcacgg cctgggtggc gctgaccgat gcgagccaag
     2581 aggccggctg catggaggtt ctctccgcgc acggcgcgcc gcggcagatg catcacgcgg
     2641 cactcaggct caaggacagc atcaaccgca ccgggcagac catcaccgag ccgctcgacg
     2701 agaccggggc gacgatgatg cagctcagcg ccggctcgtt ctcgctccac cataccttct
     2761 gcgtgcatcg ctcggcgccc aaccgcgccg cgcaccggcg tattggcatg ggcatcaact
     2821 acatccccgc ccatgtccgg ccgaccggcc cggtgcgcat gtcggcgatg ctggcccgcg
     2881 gcaccgacaa gtggggacat ttcgacttgt tcgagccgcc gacggtcgag ttcgacacgg
     2941 cgacccacgg cctggtctac gatcgctatg ccgagaacta tcgcgaacag gtgaaacgcc
     3001 acgaaagcct gttcgcgccg gaacgggtct agatcttgaa gggcaagtgc gcgctcatca
     3061 ccggctcgac gcagggactg ggctacgcca tggcgcaaag gttcgccgcc gagggctgcc
     3121 acatcgtgct gaacggcctg ggcgataagg ccgagatcga gcacaagcgc cggcagctcg
     3181 agagcgagca tggcgtgcgc gtccttcatc acagcgccga cctcgccgat cccggccaga
     3241 tcgccgacct ggtcgagacc gcgcagcgca tcttcggcgc ggtcgatatc ctgatcaaca
     3301 atgcgctcgc gcccgccaag acgccgcagg ccgtcgtcga caagcttcac gcggaaatcg
     3361 tcaaggcctt gcagaacccg gacatcaagg agcttttaag caagcaggcg atgcagccgg
     3421 tcggcaacac gccgcaggaa ttcgccgcct tcctcgcgaa ggacatcgcg atgtggaagg
     3481 aggttgcgac gatggcgaat gtcagcgtgg agtaggcgcg accatcaccg acccgaacct
     3541 cacgacagca cggtcttggc gaaccactcc acctgatctt cgaactcggc catgctgtcg
     3601 gccgggatca tcagcgcgca ggcgtgatcg acgccgatct tcttgagccc ttccaccttc
     3661 tcgcggatga gatcgggcga gccgacgagg ttggcgacga cctgcttgga aaggtcgcgg
     3721 ccggtatagg cgagcgactt gcgatgggcg accaggcctg acgccatgta gcggcgctcc
     3781 gcttcctccg gagtcttggc gatggtgagc gaaaattgcg gtgcgatctc gatctccgcc
     3841 gggtcgcggc cgagctcggc ggcgcgcgcc ttcagggtct tgatacgctc ctcgagctcg
     3901 ggccacggcc gccagcccgg cagccagccg gtggcgaacc gggccgcgcg ctcgaccgtc
     3961 gccatgttgt ggccgccgag ccagagggcg aacggctggc gcttgggctt gggatacatt
     4021 tcgaggtcgc gcacggcgta gtacttgccc tggtgcgtca cccgccgctc gctgaacagg
     4081 cggcgcatca gctccaaacc ttcgtccatc atctcgccgc gcctagcctg gggcgcgagc
     4141 cggggcgccc aggccgcgaa ctcctcgcga taggcgccga tgcccagcgc cagcaccagc
     4201 cgaccccctg aaagctggtc gatggtggcc gactgcttgg cgagccaaaa cggatcgcgc
     4261 atcggcagca cggcgagcgc cgtgccgacc cggatcctgc tggtcgcggc ggcgcagaac
     4321 gacagcacgg ttaaaagctc gtagaaattc ggcgcccggt cgggaaagag ctcgcgcaca
     4381 tagtgctggc tggtgatgtg atcgttgccc cacaccgaat cgtagccgag cttctcgcaa
     4441 agctgggcca tgcgcacgaa gtcgcccggc tcgacgaacg ggattttata catcacgcct
     4501 tcgaagccgg tcggcaggct gatgctgaac ttcatggccg atctccccgc gccgccgcca
     4561 gcgccgcgct gatggagggc acgtcgtcca tgccgccgat gatcacctcg tcgaggccga
     4621 aggctcggta ttcctcgagc ctggccttga cctgggcggg cgtgccgcag gcagcgtgca
     4681 ggcgcacgac gtcgtcgctc accaggcgat cgacttcgcg ccagttctcg gcggcatagg
     4741 cggcggccag caccgcctgg tcgagcctcg cgccggacag acggatgttc tcggcatggt
     4801 gcgcgccgcg cagcacgaag ccgatcggcc gacggatcgg atcgatgcct tctttctcgg
     4861 tggcgccgag cctggtgtag acgatgccga gcttgcggaa cggccgcccg cccgcggctt
     4921 cggccgcctg cgcgaggcag gccttcacga acggcggcga ggtcgcggcc gagatcagca
     4981 cgccgtcggt ggcgcgaccg gcgagctgca gcatgttggg gcgcgaggcc gcgagcacga
     5041 tcggcacgtt gcgcgcgccg ctggccaggc ggcggccgga aacctggaag acctggccgt
     5101 tgaactccgt catctcgccg gccagcagcg agcggcagat ggcgatcgcc tcggcgatcg
     5161 tcttgagcgg ccggggcgct ccgatgccgg ccgccttgag gtcggcgggt gcaccgacgc
     5221 cgaggcaaag gatgacgcgg ccgggataga tctcctcgag cgtcgccgcc gccatggcga
     5281 tgaagacggg atgcaccgaa taggggctca tcgccatcag cgcgatcttg atgcgccggg
     5341 tggcacccag cgccagcgcc gccatggtga tggggtcgcg cagatagaga tgacaggcga
     5401 tccacagagt cgacgcaccg ccctgctcgg cggcgcgcgc ctgggccggg atatcggcga
     5461 ccggcgcgcg gccgtccatg gcgatgccga actcagccat cggcgaagcc gtagacgtcg
     5521 cgcagcgcct tcatcacttc cggcaagccg ccggtcacga ccggcgccgg cggcagcgcg
     5581 tcctggatca ccgccgtatc ttttagcccg ctggccgtga gcagcgccac gacgcgcgcg
     5641 tcaggcgcga tgacaccgtt ggcccgcagt cgctcgatcg cggcaaaggg cgcggccgac
     5701 gccggttcgg gccagatgcc ctccttggcg cccaaggtca cgacccagcg ggcgagctcg
     5761 tcgttttcga tggtgagcgc agtaccgccg ctgcgccgca ggacctccag cgcctggacc
     5821 gtgccctggc tcgccccgat cgaggtcgcg atggagggcg cgttgcgcgg ccggtcgggc
     5881 ggcatcggct cgccgctcgc cagcgccgcc gtgatcgagc ccgagacctc cgcggcgacc
     5941 aagcgcggcg tgcggtcgat ccagcccagc gccttcaatt cctcgaagcc cttccacatg
     6001 ccgaacagcg cgtcgccgta acagaccggc agcacgcacc agtcggggac ttcccaatca
     6061 aaagcctcgg cgatctcgaa ggcgatggtc ttataacctt ccatgccata gggattgctg
     6121 ccgacgacgg ggccgaagaa gggcgacgtc ggataccagc cgagctggcg cacgcaagcc
     6181 gactgcagcc gccagcgatc cgccttgtcc tcgaccgtga ccaccatggc gccataggcg
     6241 cgcatctgcg
//
LOCUS       DASWGA010000155         8180 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_648216, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000155 DASWGA010000000
VERSION     DASWGA010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8180
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_648216"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1454
                     /locus_tag="VF991_03840"
     CDS             171..1454
                     /locus_tag="VF991_03840"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX9555600.1"
                     /translation="MILLAAAAIFVVLILFSMPIVFALGVSGVAGLAIGGYDMQVLSS
                     SMVSGSQSWVLLAIPAFVFAGGLMEKCGMSHALVDFARALVGWVKGGLGMSVIVVAYF
                     FSDICGSKMAEVSALGSTLMPPLTKAGYKPQDSASLIAAGTAMGMLVPPAIFMIVIAQ
                     VTNTSAVALFLAGFVPAATIMVCLMVLVYFRARKYDWPVDVRPNRQFLWSSAQRAAVP
                     LVIPIVILGGFFLGIFTATEAGAVVAGYAFIAALFYYKNVTFREMAKLAYESAILTAA
                     VVFLLAVASVFQYLMGVSGVPKLLADVLGPLKTMPWLFLLCTALITMMFGMVLEGLPA
                     AVVLIPVVFPIAEAMGIDPIHFNIVQTAAVGIGLFLPPMGVGLLMALKFANLTVGEHW
                     RSYLPYIAALLVGLMLIILFPQLSLFLPRSAGLIK"
     gene            complement(1447..1842)
                     /gene="rnk"
                     /locus_tag="VF991_03845"
     CDS             complement(1447..1842)
                     /gene="rnk"
                     /locus_tag="VF991_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007878612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HEX9555601.1"
                     /translation="MRDVVRTRSIPQIIVSNADYERLTDLATASLERLPDVAQELLSE
                     MDRARVVDAKAVPANVVRMGSTVTFKSDDGQQRTLTLVYPADESLDAHRISVMTPVGA
                     ALIGLAEGQSISWTARDGRRHELTVLKVT"
     gene            complement(2090..3037)
                     /locus_tag="VF991_03850"
     CDS             complement(2090..3037)
                     /locus_tag="VF991_03850"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketopantoate reductase family protein"
                     /protein_id="HEX9555602.1"
                     /translation="MKILILGAGAVGGYFGARLHQSSADVTFLLREPRAAKVKKEGLV
                     VKSPKGDAVLPVKVVTKGGDGGPYEIVILACKAYDLGSAIDSIAPAVGAGTTIVPMLN
                     GHAQFAVLDKKFGAGKVAGGLARIGGMLGPNGEVMHSSPFAAVSFGERSAAPARESLK
                     ALDAACKKAGIDGGLNDNINQDLWDKWIMLTSLAAMCCTLRGTTGDIMAADEGPALMG
                     ETVDECRGVAAAEGFDPGDKSIANLKTFLTQRGSGFAASMLGDLEKGGAIEGRHVIGD
                     MLGRARKFGVAAPNLRMAYAVVQAYEARRARDGLDKPTK"
     gene            complement(3034..3714)
                     /locus_tag="VF991_03855"
     CDS             complement(3034..3714)
                     /locus_tag="VF991_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEX9555603.1"
                     /translation="MPPLHDPDVWLFDLDNTLYPARCNLFAQIDVRIGRYIADWLKVD
                     AEEARRVQKQYWRDHGTSMRGMMSLHGVDPRHYLDYVHDIDYSPVPASPELEAALAAL
                     PGRKIIFTAGDVPHAERVMERLGVAHHFEAIFDIVAGDYWPKPHKQIYESLVTKHGID
                     PTRACMADDIAVNLKPACDMGMRTVWIRTDESVKRAADLDLDHIHHQTDDLATWLADW
                     VAQRSFKT"
     gene            3775..4830
                     /gene="rmuC"
                     /locus_tag="VF991_03860"
     CDS             3775..4830
                     /gene="rmuC"
                     /locus_tag="VF991_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEX9555604.1"
                     /translation="MDVLTIVLLAAVALLILVLVFVLARQRGGEAEAVRQQLALALSQ
                     QAETVQRVERSLREQELALGKVVAERLDRTEKATGQIVTDLRERLVRIDEAQKKIGDL
                     STQVVSLQEVLSNKQARGAFGEVQLNDLVQNALPRQAYEFQCTLSSGARVDCLLRLPN
                     PPGSIGIDAKFPLESYSALRAVAAGDAAALQIAQRSFQRAIRKHIGDIRDKYIVPGET
                     AESALMFLPSEAVYAELHANFTGLVEESYRARVWIVSPTTLMATLNTVRAVLKDVRMR
                     EQAGEIQKTVGLLLEDVRRLDDRVDKLKSHFAATEKDLRDVDTSAERITRRGQRILDV
                     DLGEEPAALPPNGGRRT"
     gene            4827..5207
                     /locus_tag="VF991_03865"
     CDS             4827..5207
                     /locus_tag="VF991_03865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9555605.1"
                     /translation="MSAGAGSATLKALVQAFNDLDLDRIMSFFADDAVLEMPRGPDPW
                     GRRHAGAAAVREGLRARFDGLPDVHYGNDSHYVDGDMGISQWTVTGTTRAGERIAARG
                     CDFYSFRDGKIVKKDSFWKIVEKA"
     gene            complement(5212..6147)
                     /gene="htpX"
                     /locus_tag="VF991_03870"
     CDS             complement(5212..6147)
                     /gene="htpX"
                     /locus_tag="VF991_03870"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HEX9555606.1"
                     /translation="MNFFRTALLLAALTAFFLVVGYLLGGQSGLVIAFVVALGMNLFA
                     YWNSDKMVLRMSNAQEVGPDQAPELYGIVQGLAQRAGLPMPRLYLIDEEQPNAFATGR
                     DPEHAAVAATTGLLRHLSREEITGVMAHELSHVRHRDTLTMTIAATLAGAIGMLASFG
                     GLMGGGRDQNGRPLANPIVAIAAMFLAPLAASLVQMAISRSREYEADRMGAEISGQPL
                     WLASALAKLQAGAQQIPNRAAEAHPTTAHLYIANPLSAGGLRGLFSTHPPMEERIARL
                     EAMAGAGGYRPAAAPPPQTSPWGAAPQAPRRGPWG"
     gene            6207..6371
                     /locus_tag="VF991_03875"
     CDS             6207..6371
                     /locus_tag="VF991_03875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1674 domain-containing protein"
                     /protein_id="HEX9555607.1"
                     /translation="MTDVKKPAADAAKPEPAKPVPPEKPKKVEEIGGPPGPEPTRYGD
                     WQFNGKVTDF"
     gene            6481..7803
                     /locus_tag="VF991_03880"
     CDS             6481..7803
                     /locus_tag="VF991_03880"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9555608.1"
                     /translation="MSKDIFHPDFKAQPWWWEAWTPNNALSQDPPAKTDVVIVGAGYG
                     GLSTALELSRNGIGAVVLERGDFGVGASTRNGGMISGGTNLGKGLGGKSPIAEEFERN
                     KAELMGAGADSLTVLEDIIAREGIECGLHKNGRFIGAWTPKHYADLATKVETYNKYAN
                     AGSEMVPRERQREMIASDYYYGGMYARRAGHLHPALYYKGLLEAAQRAGAILCARVEA
                     ERIDKTTTGFRVLTSKGPVTAREVVVATNGYTGELTPRLQRRVVPVASHIIATEDLPE
                     PASTLIPELRAVGDTKRVLTYYRPSPDGRRLIFGGRARFTAAPPEVSAPALYRYMIDR
                     FPQLDGIRITHVWTGNVAFALDYMPHMGTDQGVHYLLACNGNGVAMMTYLGTQTAKKI
                     AGGRNEPINPLDGRDFPEHALYNGEPWFLPMVGAWYRTRDWLDRRLAR"
     gene            7800..>8180
                     /locus_tag="VF991_03885"
     CDS             7800..>8180
                     /locus_tag="VF991_03885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX9555609.1"
                     /translation="MTNLPVTLPVTLEDIQLAAARIGGAVVHTPCLRSETLSRLAKAD
                     VWIKFENLQFTASFKERGALNTLLQLTPDERKRGVIAMSAGNHAQGVAYHAGRLGIPV
                     TIVMPEGTPFTKVKHTKDFGARVVL"
BASE COUNT         1325 a         2744 c         2722 g         1389 t
ORIGIN      
        1 ctctgtttgc tcaaccgtac gctcgccacg ccgggactcg agatcaatct cgccgtgctc
       61 tacgcctcgg cggtggtggg cggcgtcctg ctggtgatct acgccgtctc catgatcgtg
      121 gcgccgccgc cgcgcgatca cagcatcgta ccactggaag taagggccga atgattctgc
      181 tcgctgcggc ggcgatcttc gtcgtcctga tccttttctc catgccgatc gtcttcgcgc
      241 tcggcgtctc gggcgtggcc ggcctcgcga tcggcggcta cgacatgcag gtgctgtcct
      301 cgagcatggt ctcgggctcg cagagctggg tcctgctcgc catcccggcc ttcgtttttg
      361 ccggcgggct gatggaaaaa tgcggcatga gccatgccct ggtcgacttc gcccgcgccc
      421 tggtcggctg ggtcaagggc gggctcggca tgtcggtgat cgtggtcgcc tacttcttct
      481 ccgacatctg cggctcgaag atggccgaag tctccgcgct cggttcgacc ctgatgccgc
      541 cgctcaccaa ggcgggctac aagccccagg actcggcgtc gctgatcgcc gccggcaccg
      601 cgatgggcat gctggtgccg cccgcaatct tcatgatcgt gatcgcccag gtcaccaaca
      661 cctcggcggt ggcgctgttc ctggcgggct tcgtgccggc cgccaccatc atggtctgcc
      721 tgatggtgct ggtctatttc cgcgcccgca aatacgactg gccggtcgat gtgcggccga
      781 accggcagtt cctgtggagc tcagcccagc gcgccgcggt gccgctggtg atcccgatcg
      841 tgatcctggg cggttttttt ctcggcatct tcaccgccac tgaagcgggc gccgtcgtcg
      901 caggctatgc cttcatcgcc gcactgttct attacaagaa cgtcaccttc cgcgagatgg
      961 ccaagctcgc ctacgaaagc gcgatcctga cggccgcggt ggtgttcctg ctggccgtcg
     1021 cctcggtgtt ccaatacctg atgggcgtct cgggcgtgcc gaagctcttg gccgacgtgc
     1081 tgggaccgct gaaaaccatg ccgtggctgt tcctgctctg caccgcgctg atcaccatga
     1141 tgttcggcat ggtgctggaa ggcctgccgg ctgccgtggt gctgatcccg gtggtgttcc
     1201 cgatcgccga agcgatgggc atcgatccca tccatttcaa catcgtgcag acggcggcgg
     1261 tcggcatcgg cctgttcttg ccgccgatgg gcgtcggtct gctgatggcg ctgaaattcg
     1321 ccaacctcac ggtcggcgag cactggcgtt cctacctgcc ctatatcgcc gccctgctgg
     1381 tcgggctgat gctgatcatc ctgttcccgc agctctcgct gttcctgccg cgcagtgccg
     1441 gcctgatcaa gtgaccttga gcaccgtgag ttcgtggcgg cggccgtcac gcgccgtcca
     1501 gctgatcgac tggccctcgg cgaggccgat caaggcggcg ccgaccggcg tcatcaccga
     1561 gatgcggtgc gcatcgaggc tttcgtcggc cgggtagacc agggtgagcg tccgctgctg
     1621 gccgtcgtcc gacttgaagg tcacggtcga acccatgcgc acgacgttgg ccggcaccgc
     1681 cttcgcatcg accacccgcg cgcgatccat ctccgacagc agctcttgcg cgacgtccgg
     1741 caggcgctcc agcgaggcgg tggcaaggtc ggtcagccgc tcgtaatcgg cattactgac
     1801 gatgatctga ggtatcgaac gggtccgaac gacgtcgcgc atggcgatct cctgaaaaca
     1861 acgcacgtca agccgcagta aacgttgctg catgaactgt ctgatggatg cttgttcgcc
     1921 tggtggactg tttacttctg ggcgaagcgt gcgcccccag gcggggcgca gcaagggccg
     1981 gctgggggac tacgctgggg cgaccggttg gttccgtcgc cccatcaact ggtgtgcggc
     2041 caaacttttc ataccccagg aaatggggct tcgagccggc gaaatcaagc tacttggtgg
     2101 gcttgtccag cccgtcgcgc gcacgtcgtg cctcataggc ctgcaccacg gcataggcca
     2161 ttcgcagatt aggtgcggcg acgccgaact tgcgggcccg gcccagcatg tcgccgatca
     2221 cgtggcggcc ctcgatcgcg ccgcccttct cgaggtcgcc cagcatggag gcggcaaagc
     2281 ccgagccgcg ctgcgtcagg aaggtcttga ggttggcaat gctcttgtcg cccggatcga
     2341 agccctcggc ggcggcgacc ccccggcatt cgtcgaccgt ctcgcccatc agcgccgggc
     2401 cctcgtcggc cgccatgatg tcgccggtcg tgccgcgcag cgtgcagcac attgcggcga
     2461 gcgacgtgag catgatccac ttgtcccaga gatcctggtt gatgttgtcg ttcagcccgc
     2521 catcgatgcc ggccttcttg caggccgcgt ccagcgcctt caacgactcg cgcgcgggcg
     2581 cggccgaacg ttcgccgaac gacaccgcgg cgaacgggct gctatgcatc acctcgccgt
     2641 tgggacccag catgccgccg atgcgcgcca ggccgcctgc gacttttccc gcgccgaatt
     2701 tcttgtcgag cacggcgaac tgggcgtggc cgttcagcat cggcacgatg gtcgtgccgg
     2761 cgccgaccgc gggcgcgatc gagtcaatcg ccgagccgag gtcgtaggcc ttgcaggcca
     2821 ggatgacgat ctcgtagggc cccccgtcgc cgcctttggt cacgaccttg accggcagga
     2881 cggcgtcacc cttggggctt ttcaccacca ggccttcctt tttgaccttg gcggcgcgcg
     2941 gctcgcgcag caggaaggtg acgtcggcgc tgctttgatg caggcgcgcg ccgaaatagc
     3001 cgccgaccgc gccggcgccg aggatcagga tcttcacgtc ttaaaactcc tttgcgccac
     3061 ccagtcggca agccaggtcg cgaggtcgtc ggtctggtgg tggatatggt cgaggtcgag
     3121 gtcggccgcg cgcttgacgc tttcgtcggt gcggatccac accgtgcgca tgcccatgtc
     3181 gcaggcgggc ttcaggttga cggcgatatc gtcggccatg caggcgcgcg tcgggtcgat
     3241 gccgtgcttg gtaaccagcg attcatagat ctgcttgtgc ggcttgggcc aatagtcgcc
     3301 ggccacgatg tcgaagatcg cctcgaaatg atgagccacg cccagccgct ccatcacccg
     3361 ctcggcgtgc ggcacgtcgc cggcggtgaa gatgatcttt cggccgggca gggcagcaag
     3421 cgccgcctcg agttcggggc tggccggcac cggcgagtag tcgatgtcgt gcacgtagtc
     3481 gagatagtgg cgcggatcga cgccgtgcag gctcatcatg ccccgcatcg aggtgccgtg
     3541 gtcgcgccaa tactgcttct gcacccgccg tgcctcctcg gcatcgacct tcagccagtc
     3601 ggcgatatag cggccgatgc gcacgtcgat ctgggcaaac aggttgcagc gcgccggata
     3661 gagcgtgtta tcgaggtcga acagccagac gtcagggtcg tgcagcggcg gcatggtggc
     3721 cccaattaac ggccatccgt gcgcttgtcg agacggcggc ttataagggg actaatggat
     3781 gtcctgacga tcgttttgct ggcggccgtt gcgctgctga tcctggtgct ggttttcgtc
     3841 ctggcccgcc agcgtggcgg cgaggcggag gccgtgcgcc agcaactggc gctggcgctc
     3901 agccagcagg ccgagaccgt gcagcgggtc gagcgttcgc tgcgcgagca ggagctggcg
     3961 ctcggcaagg tcgtcgccga gcggctcgac cgcaccgaga aggcgaccgg ccagatcgtc
     4021 accgacctgc gcgaacggct ggtccgcatc gacgaggcgc agaagaagat cggtgatctc
     4081 agcacccagg tcgtgagcct gcaggaagtg ctgtccaaca agcaggcgcg cggcgctttc
     4141 ggcgaggtcc aactcaacga cctggtgcaa aacgccctgc cgcgccaggc ctacgagttc
     4201 cagtgcacgc tttcctccgg cgcgcgcgtc gactgcctct tgaggctgcc caacccgccg
     4261 ggctcgattg gcatcgacgc caagttcccg ctggaaagct atagcgcgct gcgtgccgtg
     4321 gcggcgggcg atgcggccgc cctgcagatt gcccagcgca gcttccagcg ggcgatccgc
     4381 aagcacatcg gcgatatccg cgacaagtac atcgtgcccg gcgagaccgc cgaatcggcg
     4441 ctgatgttcc tgccctcgga agccgtctac gccgagctgc acgccaattt caccggcctg
     4501 gtcgaggaat cctaccgcgc gcgcgtgtgg atcgtgtcgc cgaccaccct gatggcgacg
     4561 ctcaacacgg tgcgcgccgt gctgaaggac gtgcgcatgc gcgagcaggc gggcgagatc
     4621 cagaagaccg tcggactctt gctggaggac gtgcggcggc tggacgatcg ggtcgacaag
     4681 ctcaaaagcc atttcgccgc gaccgagaag gatttgcgcg atgtcgacac ctcggccgag
     4741 cgaatcaccc ggcgcggcca gcgcatcctc gatgtcgatc ttggcgagga gccggcggcg
     4801 ctgccgccca acggaggacg ccggacatga gtgcgggtgc cggcagcgcc acattgaagg
     4861 ccctggttca ggccttcaac gatctcgatc tcgatcggat catgagcttc ttcgccgatg
     4921 acgccgttct ggagatgccg cgcggccccg atccgtgggg caggcgtcat gccggagccg
     4981 ccgcggttcg cgagggcctg cgcgcccgct ttgacggatt gccggacgtc cactacggaa
     5041 acgacagcca ctatgtcgat ggcgacatgg gcatttcgca gtggaccgtg acggggacga
     5101 cgagggcagg cgagcgcatc gcggcgcgcg gctgcgactt ctacagcttc cgcgacggca
     5161 agatcgtcaa gaaggactca ttctggaaga tcgtcgagaa ggcctagacc ctcaacccca
     5221 cggcccacgg cgcggcgcct gcggcgcggc gccccatggg ctggtctgcg gcggcggcgc
     5281 agcggccggc cgatagccgc cggcaccggc catcgcctcg agccgcgcga tgcgctcctc
     5341 catcggcgga tgagtggaga acaggcccct gaggccaccc gccgacagcg ggttggcgat
     5401 gtagagatgc gccgtggtcg gatgcgcctc ggcggcccgg ttggggatct gctgggcgcc
     5461 ggcctgtagt ttggccagcg ccgaggcgag ccacagcggc tggccggaaa tctccgcgcc
     5521 catgcgatcg gcctcgtatt cgcggctgcg gctgatcgcc atctgcacca gcgaggccgc
     5581 cagcggcgcc agaaacatgg cggcgatggc cacgatggga ttggccagcg gccggccgtt
     5641 ctggtcgcgg ccgccgccca tcaggccgcc gaagctcgcc agcatgccga tggcgccggc
     5701 cagggtggcg gcaatggtca tggtgagcgt gtcgcgatgg cggacgtggc tcagctcatg
     5761 ggccatcacg ccggtgatct cctcgcggct gagatggcgc agcaggccgg tcgtcgccgc
     5821 caccgcggca tgctcgggat cgcgcccggt ggcgaaggcg ttgggctgct cctcgtcgat
     5881 caggtagagg cgcggcatcg gcaggccggc gcgctgggcc aacccctgca cgatgccata
     5941 gagctcgggc gcctggtcgg ggccgacctc ctgggcgttg ctcatgcgca gcaccatctt
     6001 gtcgctgttc cagtaggcga acaggttcat gcccagcgcc acgacaaagg cgatgacgag
     6061 gccggactgg ccgcccagca gatagcccac gaccaggaag aaggcggtca aggccgccag
     6121 gagaagggcc gtgcgaaaga agttcatggc cagaaaggtg gttcgcgacg gtggcgaatc
     6181 aagccattga ccggcatcat ggcgccatga ccgatgtcaa aaaacccgcc gccgacgcgg
     6241 ccaagcccga accggccaag cccgtgccgc cggagaagcc caagaaggtc gaggagatcg
     6301 gcgggccgcc cggccccgag ccgacgcgtt acggcgactg gcagttcaac ggcaaggtga
     6361 cggacttcta gtgcactccg tcatcctgag cgaagcgaag gatctcatgc cctcagcaac
     6421 cggcgatgag gtccttcgct gcgctcagga cgacagaatg ggctgtggtg ccagagagac
     6481 atgagcaaag acatcttcca ccccgacttc aaggcgcaac cctggtggtg ggaggcgtgg
     6541 acacccaaca acgcgttgtc gcaggacccg ccggccaaga ccgatgtcgt catcgtcggc
     6601 gcgggctatg gcggcctgtc gacggcgctc gagctcagcc gtaacggcat cggcgccgtc
     6661 gtgctggagc gcggcgattt cggcgtcggc gcctcgacgc gcaacggcgg catgatctcg
     6721 ggcggcacca atctcggcaa gggtctgggc ggcaagagcc cgatcgccga agagttcgag
     6781 cgcaacaagg ccgagctgat gggcgccggc gccgattccc tcaccgtgct ggaggacatc
     6841 atcgcccgcg agggcatcga gtgcggcttg cacaagaatg gccgcttcat cggcgcctgg
     6901 acgcccaagc actatgccga cctcgcgacc aaggtcgaga cctacaacaa atacgccaat
     6961 gccggcagcg agatggtgcc gcgcgagcgt cagcgcgaga tgatcgcgtc ggactattac
     7021 tacggcggca tgtacgcccg ccgcgccggc catctgcatc ccgcgctcta ctacaagggc
     7081 ctgctggaag ccgcacagcg cgccggcgcc attttatgcg cgcgcgtcga ggccgagcgc
     7141 atcgacaaga cgacgacggg ctttcgcgta ctgacctcga aaggaccggt cacggcgcgc
     7201 gaggtggtgg tcgccaccaa cggctatacc ggcgagctga cgccccggct gcagcgccgg
     7261 gtcgtgccgg tggcgagcca catcatcgcc accgaagacc tgcccgagcc cgccagcacg
     7321 ctgatccccg agctgcgcgc cgtcggcgac accaagcggg tgctgaccta ctaccggccc
     7381 tcgcccgacg gcaggcggct gatcttcggc ggccgcgccc gcttcaccgc ggcgccgccc
     7441 gaggtgagcg caccggcgct ctaccgctac atgatcgacc gcttcccgca gctcgacggc
     7501 atccgcatca cccatgtgtg gaccggcaat gtcgccttcg cgctcgacta catgccgcac
     7561 atgggcaccg accagggcgt gcattatctg ctggcgtgca acggcaatgg cgtcgccatg
     7621 atgacctatc tcggcaccca gaccgccaag aagatcgccg gtgggcgcaa cgagcccatc
     7681 aacccgctgg acggccgcga ttttcccgag cacgccctct acaacggcga gccgtggttc
     7741 ctgcccatgg tcggcgcctg gtaccgcacg cgcgactggc tcgaccgccg gttggcgcga
     7801 tgaccaacct tccggttacg ttgcccgtta cgttggaaga catccagctc gccgccgcgc
     7861 gcatcggcgg cgcggtggtg cacacgccct gcctgcgaag cgagacgctg tcgcgccttg
     7921 ccaaggcgga cgtctggatc aagttcgaga acctgcaatt caccgcttcc ttcaaggagc
     7981 gcggcgcgct caacaccttg ctgcagctca cgcccgacga gcgaaagcgc ggcgtcatcg
     8041 ccatgtcggc cggcaaccac gcccagggcg tggcctatca cgcgggtcgg ctcggcattc
     8101 cggtcaccat cgtgatgccg gaaggcacgc ccttcaccaa ggtcaagcac accaaggatt
     8161 tcggcgcgcg cgtcgtattg
//
LOCUS       DASWGA010000156         6558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_275742, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000156 DASWGA010000000
VERSION     DASWGA010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6558
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_275742"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2582)
                     /locus_tag="VF991_03890"
     CDS             complement(<1..2582)
                     /locus_tag="VF991_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9555610.1"
                     /translation="MQAIVGAALQQRILVLILSIALIVGGLFAYKQLNIEAYPDPVPP
                     MVDIVTQNPGQSSEEIERYITIPIEVQMAGIPYVTSVRTISLTGLSDVKVQFTYDVAY
                     PQASQMVINRLSQLGPLPNGAQPFISPTSPIGEIFRYRVVGPPGYSVTDLKTIQDWIL
                     LRRLKSVPGVIDVTTWGGKSKTFDITVDLDKLLAYGLTLKQVLDALNGANINVGANTV
                     NLGPQSAVIRSVGQIRTMADIGHTMLTVRDGSPVLVSDVATITVGHQPRLGVAGHDED
                     DDIVQGIVLMRRSAETLPTLRGVEKEVDRINRSDLLPPGVRIERVYDRSVLVDVTTST
                     VLHNMVMGVCLVFLIQWLFLGDLRSALIVSATIPFALLFAVMILVLSGESANLLSMGA
                     IDFGIIVDATVIMMENVFRHLAEASTGHAPRPSALATPRGLTGKLATIYQASGEVTQA
                     IFFSASIIIAGFLPLFTLSGVEGHIFGPMAKTYIYALSGGLLATFTLSPALAALLLPA
                     RVSETETIIVRALRRLYRRVFDRVLIWRGVTLAAGAGLIACAAFAASTVGLEFLPKLE
                     EGNIWLRAALPPSVSLDEGNIYANRMRRMVKSFPEVETVITQHGRPDDGTDPDGFSNV
                     EFFVPLKPFDKWRRGLSKEQLISEMADALRKGFPGATFGFSQYIQDNVQEAASGIDAE
                     NAIKISGSDLDTLRRLAVEIRRVLEKVRGITDIQVPPLLGQPTIRIDIDRERAARYGL
                     SPGDINATIQAAVGGQAAGDLYEQGSDRHFPLLVRLAPRYRENIEALRRIAIGAPGPN
                     GGVVQVPLAEVARIGLATGAFYIYREAQERYIPVKFSVRGRDLGGAVLEAQEKIAEQV
                     KLPSG"
     gene            complement(2793..3083)
                     /locus_tag="VF991_03895"
     CDS             complement(2793..3083)
                     /locus_tag="VF991_03895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555611.1"
                     /translation="MSGASLTAASIMLVSGCASTCGANPEKLAILQRGMSYGETARIM
                     GCDGNVISPHSPASGEASVVEWNGPGSIFMATQAAFIDDRLLYYTTRTKGGF"
     gene            complement(3114..4643)
                     /locus_tag="VF991_03900"
     CDS             complement(3114..4643)
                     /locus_tag="VF991_03900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEX9555612.1"
                     /translation="MRLSPFAVCLALGACTMGPDFRSPDPPATGLYLAEDQPTNLVAA
                     NIPGGETQRIVQNLDIPGQWWAVFHLRPLNDLIERSLIANPDIHAARAALRAAQFNAR
                     AQRATLFPTLQAGVGASQNQVSNVLSPPTANPDVFIYSLFTVGFTISYTLDLFGANRR
                     AIESLEALAEAQCFQLEAAYLSLASNVVAAAIQEASLRAQIEATQRIIAAQRETLDIL
                     RRQEGLGAVTGADVAQQEAALAQAEATLPPLQKALAQGRNLLATLSGRFPSVRVAEYF
                     ELSDLVLPPDLPLSLPSRLVEQRPDIRAAEATLHSASAQVGVATANQFPQITLNAGFT
                     PTSIVFNQLFLPGQLSSVAGASILQTIVDGGALAAKKRAAQAALEQADAQYRSTVLTA
                     FRNVADVLRALEYDALALQAAVAAERASANSLTIARRRLELGDTTYVVVLAAELSYRQ
                     TLLARVQAQANRFTNTAALFQALGGGWWNRDDTLSNPAKRLTCRPPKPAGVAPATAAL
                     K"
     gene            complement(4643..>6558)
                     /locus_tag="VF991_03905"
     CDS             complement(4643..>6558)
                     /locus_tag="VF991_03905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9555613.1"
                     /translation="SEARHAPARPTRPTPDGLDGKLATIFHASTEVTQAIFFSATIII
                     AGFLPLFTLSGVEGHIFGPMARTYAYALSGGLLATFTMSPALAALLLPERVSEVETRA
                     VRALRSLYTKVRDVVLARRRTTLAAGLGAGALALLAGSTIGLEFLPKLEEGNMWIRAV
                     MPASISLEAGNDYANRMRKLIKGFPEAETVISQHGRPDDGTDSTGFFNAEFFVPLKPF
                     DQWRKGRDKEGLVAEINDALQKAFPGVEFTFSQYIQDNVQEAASGVKGENSVKVYGPD
                     LETLAKVANEIKNAIATVPGIADLAVSASLGQPTIRIDIDRNKAARYGLAPGDINATV
                     QAAIGGQAAGDVYESGSDRHFPMIVRLAPRYRENIEAIRRIPIGVQGANGVAQVPLSE
                     VAAVQLVSGAYYIYREQQGRYVPVKFSVRGRDLGSAILEAQQRVAEQVKIPSGYRVEW
                     VGEFGNLKNALARLAVAVPIAIALILLLLYVSFGSLRDTLIAGSAIPMALVGGILGLF
                     LADMPFSISAAIGFVALFGIAAMNGIMVLSCYNRLIDAGRERTAALSETCSVQMRPVL
                     MTCAAACVGLLPAAFSTAIGSQVQRPLAVVVVGGTLLAPVLFLTVLPAAIGLFSRRQA
                     KALAPAATVAEAH"
BASE COUNT         1108 a         2090 c         2285 g         1075 t
ORIGIN      
        1 ccgcttggca gcttgacctg ttcggcgatc ttttcctgcg cctcgagcac ggcgccgcca
       61 aggtcgcggc cgcgcacgct gaacttcact gggatgtagc gctcctgtgc ctcgcggtag
      121 atgtagaagg cgcccgttgc caggccgatc ctggcgacct cggcgagcgg cacctggacc
      181 acaccgccat tcggcccggg cgcgccgatg gcgatgcgcc ggagcgcctc gatattctcg
      241 cgatagcgcg gcgccagccg caccagcagg gggaagtggc ggtcgctgcc ctgctcgtag
      301 aggtcgcccg ccgcctggcc gccgaccgcc gcctggatgg tggcgttgat gtcaccgggc
      361 gacaggccat agcgtgcggc gcgctcgcgg tcgatgtcga tcctgatggt cggctggccg
      421 agcagcggcg ggacctggat atcggtgatg ccgcgcacct tctccagcac acggcggatt
      481 tcgacggcta gcctgcgcag ggtgtcgagg tcggagccgg agatcttgat ggcattttcg
      541 gcgtcgatgc cggacgccgc ttcctgcacg ttgtcctgga tgtactgcga gaagccgaag
      601 gtcgcgccgg ggaagccctt gcgcagcgcg tcggccatct ccgagatcag ctgttccttg
      661 gagagtcccc tgcgccattt gtcgaacggt ttcagcggca cgaagaactc gacgttggag
      721 aaaccatcgg ggtcggtccc gtcgtcgggc cgcccgtgct gcgtgatgac cgtctcgacc
      781 tcgggaaagc ttttgaccat ccggcgcatg cgattggcgt agatgttgcc ctcatcgagc
      841 gacaccgacg gcggcagtgc cgcgcgcagc cagatgttgc cctcctcgag cttgggcagg
      901 aactccagtc cgaccgtgct ggcggcgaac gcggcacagg cgatgaggcc cgcgccggcc
      961 gccagggtga cgccgcgcca tatcaggacg cggtcgaaaa cacgccggta cagacggcgc
     1021 agggcgcgca cgatgatcgt ctcggtctcc gacacccggg ccggcagcag cagggcggcg
     1081 agcgccggcg acagggtgaa ggtggcgagc aagccgcccg acaaggcgta gatataggtc
     1141 ttggccatcg gcccgaagat gtggccttcg acacccgaca gggtgaacag cggcaggaaa
     1201 cccgcgatga tgatgctggc cgagaagaag atcgcctgcg tgacctcgcc tgaggcttgg
     1261 tagatcgtgg cgagcttgcc tgtgaggccg cgcggcgtgg cgagcgcgga cggacgcggg
     1321 gcatggccgg tgctcgcctc ggcgaggtgg cggaagacgt tctccatcat gatcacggtg
     1381 gcatcgacga tgatgccgaa gtcgatggcg cccatggaga gcaggttggc cgattcgccg
     1441 ctcagcacca ggatcatcac ggcgaacaag agcgcgaagg gaatggtggc cgagacgatc
     1501 agcgcgctgc gcagatcgcc caggaacagc cactggatca aaaagaccag gcagacgccc
     1561 atcaccatgt tgtgcagcac ggtgctggtc gtcacgtcga ccagcacact gcggtcgtag
     1621 acgcgttcga tgcgcacgcc gggcggcagc agatcggaac ggttgatgcg gtcgacttcc
     1681 ttttccacgc cgcgcagggt cggcagggtt tccgcgctac ggcgcatcag cacgatgccc
     1741 tgcacgatgt cgtcgtcttc gtcgtggccg gccacgccca gccgcggctg gtggccgacc
     1801 gtgatggtcg ccacgtcgga gaccagcacc ggcgagccat cgcgcaccgt cagcatggtg
     1861 tggccgatat cggccatggt gcggatctgc ccgacgctgc ggatcaccgc cgactgcggg
     1921 ccgagattga ccgtgttggc gccgacattg atgttggcgc cgttcagcgc atcgagcacc
     1981 tgcttgagcg tgaggccgta ggccaggagc ttgtcgagat cgacggtgat gtcgaaggtc
     2041 ttgctcttgc cgccccaagt cgtgacatcg atcacgcctg gcaccgactt cagacgacgc
     2101 agcaggatcc agtcctggat ggttttcagg tcggtcacgc tgtagccggg cgggccgacg
     2161 acgcgatagc ggaagatctc gccgatcggg ctggtcggcg agatgaaggg ctgcgcgccg
     2221 ttgggcagcg gcccgagctg tgacagccgg ttgatcacca tctgcgacgc ctgcggatag
     2281 gccacgtcgt aggtgaactg caccttcacg tcggagaggc cggtcagcga gatcgtgcgg
     2341 accgacgtca catagggaat ccccgccatc tgcacttcga tgggaatggt gatgtagcgc
     2401 tcgatctcct ccgacgactg gccggggttc tgtgtcacga tgtcgaccat cggcggcacc
     2461 gggtcgggat aggcttcgat gttgagctgc ttgtaggcaa acagtccgcc gacgatcagc
     2521 gcaatgctga gaatcaatac gagtatgcgc tgctgaagcg ctgcaccgac gattgcctgc
     2581 atcgtgaccc gtatggacgc gcgccgatgt ccggcggctc ctcccttaca ggtctcttac
     2641 gacacaaact ctgcagacgc atcacacatg atgcggccgc cgcttcacta cgtctgcgat
     2701 gtcaaagccg gtgccgggaa cggattcgcc aaacgcgcct cggcacgata gccgccgtca
     2761 cgctcggcgg atgcatcgct tcaacacgcc ctctaaaacc cgcccttggt tctcgtcgtg
     2821 tagtaaagga gccggtcgtc gatgaaggcc gcctgcgttg ccatgaagat cgagcccgga
     2881 ccgttccatt cgacgaccga tgcctcgccg gaggcgggac tgtgtggcga aatcacgttg
     2941 ccatcgcatc ccatgatcct ggcggtttcc ccgtaactca tgccacgttg caaaatggcg
     3001 agcttctccg ggttggcgcc gcatgtcgaa gcgcagccgg acacgagcat gatcgatgcc
     3061 gccgtcaggc tcgcgccgct catcgcccag agccacctca tccgctcctc ggcctacttg
     3121 agcgccgccg tcgcaggcgc aacgccggcc ggcttgggcg gcctgcacgt caacctcttg
     3181 gccggattgg aaagcgtatc gtcccggttc caccagccac cgccgagcgc ctgaaacagc
     3241 gccgccgtgt tggtgaagcg gttggcttgc gcctgcacgc gggccagcag cgtctgccgg
     3301 tagctgagtt cggcggcgag tactacgaca taggtcgtgt cgccgagctc caggcgccgg
     3361 cgcgcgatcg tgaggctgtt tgcggaggct cgctcggcag ccacggcggc ctgcagcgcg
     3421 agcgcgtcgt attccaaggc ccgcagcacg tcagcgacat tgcgaaaagc ggtgagcacc
     3481 gtcgaacggt actgtgcgtc agcttgctcc agtgccgctt gtgctgccct cttcttggcc
     3541 gccagcgcgc cgccgtcgac gatggtctgg aggatgctgg cgccagcgac cgagctgagc
     3601 tgcccgggca ggaagagctg attgaagacg atcgacgtag gagtaaagcc ggcattcaac
     3661 gtgatctgcg gaaactggtt ggcggtggcg acacccacct gggcgctcgc cgaatgcagg
     3721 gtcgcctcgg ccgcccgaat gtcgggccgc tgctcgacaa gtcgggatgg caggctcagc
     3781 ggcaggtccg gcggcagcac gagatcgctc aactcgaaat actcggcgac ccggacgctg
     3841 gggaatcgtc ccgacagggt cgccagcagg ttccgaccct gcgccagcgc cttctgcagg
     3901 ggtggcaggg ttgcctcggc ttgggcaagg gccgcttcct gctgggcgac gtcggcgccc
     3961 gtgacggcac ccagcccctc ctggcgccgc aggatgtcga gcgtctcgcg ttgggcggcg
     4021 atgatgcgct gggtcgcctc gatctgggcg cgcagcgagg cctcctggat ggccgcggcg
     4081 accacgttgg aggcgagcga cagataggcc gcctcgagct ggaagcactg cgcctcggcc
     4141 agcgcctcga gcgattcgat ggcccgccgg ttggcgccga acaggtcgag cgtgtagctg
     4201 atggtgaagc cgaccgtgaa caggctgtag atgaagacgt cggggttagc ggttggcggc
     4261 gacaggacat tcgacacctg gttctggctg gcgccgacgc ctgcctgcag cgtcggaaag
     4321 agtgttgcgc gctgggcgcg cgcattgaac tgcgcggccc gcagggccgc ccgggccgca
     4381 tgtatgtcgg gattcgcaat tagcgaacgc tcgatcaggt cgttcagcgg ccgcaaatgg
     4441 aacacggccc accattggcc cggaatgtcg aggttctgca cgatccgctg cgtctcgccg
     4501 ccgggaatat tggcggcgac gagattggtc ggctgatcct cagcgagata gaggccggtc
     4561 gcgggaggat cgggactgcg aaagtccggc cccatcgtac aggcccccag ggcaaggcat
     4621 acggcgaatg ggctaagacg catcaatgcg cctccgcgac ggtggcggcc ggcgccaagg
     4681 ccttggcttg gcggcgcgag aacaggccga tcgcggctgg caggacggtg aggaaaagca
     4741 cgggtgccag cagggtaccg ccaaccacga cgacggcaag cggccgctgg acctggctgc
     4801 cgatcgccgt cgagaaggcg gcgggcaaga ggccgacgca cgccgccgcg caggtcatta
     4861 gcaccggccg catctgcacg ctgcaggtct cgctgagagc cgccgtgcgc tcacggccgg
     4921 catcgatcag ccggttgtag cagctcagca ccatgatacc gttcatggcg gcgatgccga
     4981 acagggcgac aaaaccgatg gcagccgaaa tgctgaacgg catgtcggcc aggaacaggc
     5041 ctagaatgcc gccgaccagc gccatcggga tggcgctgcc ggcgatcaag gtgtcgcgca
     5101 gcgagccgaa gctgacatag agcagcagca ggatcagcgc gatggcgatc ggcacggcga
     5161 ccgccagccg cgccagcgcg ttcttgaggt tgccgaattc accgacccat tccacgcggt
     5221 agccgctcgg gatcttgacc tgctcggcga cccgctgctg ggcctccagg atggcgctgc
     5281 cgagatcgcg gccgcgcacg ctgaacttca ccggaacata gcgtccctgc tgttcgcggt
     5341 agatgtaata ggcacccgag acgagctgca ccgcggcgac ttcgctcagc ggcacctggg
     5401 cgacgccatt ggcgccctgc acgccgatcg gaatgcgccg gatcgcctcg atgttctcgc
     5461 gatagcgcgg cgccaggcgg acgatcatcg ggaagtgccg gtcgcttccg ctttcgtaga
     5521 cgtcgcccgc ggcctggccg ccgatcgccg cctggaccgt ggcgttgatg tcgccggggg
     5581 cgaggccgta gcgggcggcc ttgttgcggt cgatgtcgat gcggatggtc ggctggccga
     5641 gcgacgccga caccgcgagg tcggcaatgc cgggcacggt ggcgatggcg ttcttgatct
     5701 cgttcgccac cttggccagc gtctcgaggt cggggccgta gaccttgacc gagttctcgc
     5761 ccttcacgcc cgacgccgct tcctggacgt tgtcctggat gtactgcgag aaggtgaatt
     5821 cgacgccggg aaacgccttc tgcaaggcat cgttgatttc ggcgaccaag ccctccttgt
     5881 cgcggccctt gcgccactgg tcgaatggct tcagcggcac gaagaactcg gcattgaaga
     5941 agccggtcga atcggtgccg tcatcgggcc ggccgtgctg ggagattacg gtctcggcct
     6001 cggggaagcc cttgatcaac ttgcgcatgc ggttggcgta gtcgttgccg gcctcgagcg
     6061 agatcgacgc cggcatgacg gcgcggatcc acatgttgcc ttcctcgagc ttgggcagga
     6121 actccaggcc gatcgtgctg ccggccagga gggcgagcgc gcccgcgccg agccccgccg
     6181 ccagggtggt gcgccgccgc gccagcacga cgtcgcgcac ctttgtgtac agactgcgca
     6241 gcgcgcgcac tgcccgcgtc tcgacctcgc tcacccgctc gggcagcagc agggcggcga
     6301 gcgccggcga catggtgaag gtggcgagca ggccgcccga cagggcgtag gcgtaggtcc
     6361 gggccatcgg gccgaagatg tgaccttcga cgcccgagag cgtgaacagc ggcaggaagc
     6421 ccgcgatgat gatggtggcc gagaagaaga tcgcctgggt gacttcggtc gaggcgtgga
     6481 agatcgtggc gagcttgccg tcgagaccgt ccggagtggg ccgggtcggc cgcgccggcg
     6541 catggcgggc ctccgaga
//
LOCUS       DASWGA010000157         2397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2299936, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000157 DASWGA010000000
VERSION     DASWGA010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2299936"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VF991_03910"
     CDS             <1..264
                     /locus_tag="VF991_03910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HEX9555614.1"
                     /translation="HHRPITVRWGGTIGTVAPSTAHQVTLDLIPDNSPATFTMEPPGF
                     HLHLWSAEAGLVTHTVPVGKFEGPFPFVLDADYPGHTAEPKAA"
     gene            complement(484..813)
                     /locus_tag="VF991_03915"
     CDS             complement(484..813)
                     /locus_tag="VF991_03915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555615.1"
                     /translation="MSFNRLAGVFLALPLLAFFSGAALADAIDGDWCHGDGRRLSING
                     PDIVTPGGTHLKGDYDRHHFSYVVPASEPGAGATVAMVLLSEILMRLKPPAGEEQTWR
                     RCGKPIS"
     gene            complement(884..1657)
                     /locus_tag="VF991_03920"
     CDS             complement(884..1657)
                     /locus_tag="VF991_03920"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX9555616.1"
                     /translation="MSVIRFTNDRSVGWLEFNRPPVNAFTREMVDEVHDVLLATLADP
                     GVRVMVLASAVERYFSAGADLQVFKGMTGEGMRQWATRCHDIVRLLRASPKPLLAAIH
                     GTAVGGGLEMTLHCDLRFAASDARLGQPEINIGFIPPIATTQALARLIGRPRAIRYLY
                     DGRLVSAAEALHWGLVDELVEPAGLRARVQDYAEELTAKSPAALAAIRRTVTLGGGMT
                     FEDGMKYELETAAKLADTPDFAEGVDAFLAKRPPVWRGG"
     gene            complement(1683..>2397)
                     /locus_tag="VF991_03925"
     CDS             complement(1683..>2397)
                     /locus_tag="VF991_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555617.1"
                     /translation="AVGWRGTLLAYAGIHLLACAPVHLLVLPNRPPAHHLVASAAPAP
                     SGVAPEVQSRVFLLLSLTLASGAFVFTGAMVHMIEILRGLGHAPASAVFLASMIGPTQ
                     IAIRLFELLFGHRYSIMNSAVFGSAMLPFGLALALLDGGSFAIALVFIAAYGIANGLK
                     AVQRATLPLALFGRGQFGAYMGRLALPQGIVSAAAPPVMAAVLSNFGTSGALWLTFAA
                     AMLSLLAMILLARLARTIR"
BASE COUNT          423 a          791 c          845 g          338 t
ORIGIN      
        1 catcatcggc cgatcaccgt gcgctggggc ggcacgatcg gcacggtggc gcccagcacg
       61 gcccaccagg tcacgctcga cctgatcccg gacaacagcc cggcgacctt caccatggaa
      121 ccgccgggct ttcacctgca tctctggtcg gccgaggccg ggctggtgac gcacaccgtg
      181 ccggtcggca agttcgaggg accgttcccc ttcgtgctcg atgccgacta tccgggacac
      241 acggcggagc cgaaggcggc ctagctctca ttcgcctccc ccgtctccgc gccttctgag
      301 gcgcgtaagg gggaggtggc ccgaagggcc ggagggggaa agccgcaaac gaggtctgtg
      361 gcgattccag atctgatact ttcaaaagat cgtctgtgtt gccttccccc tccgcccgta
      421 tgacgggcac ctcccccgta agacggggga ggaatggctt tgtgagcaca tcgagcagcg
      481 cgatcagctg atcggcttgc cgcagcgacg ccaggtctgc tcctcgcccg cgggcggctt
      541 caggcgcatc aggatctcgc tcagcaggac catggcgacc gtcgcaccgg cgccgggctc
      601 ggatgccggg acgacgtagg aaaaatggtg gcgatcgtag tcgcctttca ggtgcgtgcc
      661 gcccggcgtg acgatgtcgg ggccgttgat cgagagccgt cgtccatcgc catggcacca
      721 gtctccatcg atggcgtcgg ccaacgctgc tccgctgaaa aatgccaata gcggcaacgc
      781 caagaagacg ccggccaatc gattgaagga catcacgcgc tcccaccggt tcccggacag
      841 cttcggaccg aggctgctcg aacgcaaggc ccgacagtct tcctcagccg ccgcgccaga
      901 ccggcggacg cttggcgagg aaggcgtcga cgccctcggc gaagtccggc gtgtcggcga
      961 gcttggccgc cgtctcgagc tcgtatttca tgccgtcctc gaaggtcatg ccgccgccca
     1021 aagtgaccgt gcgccggatg gcggccaggg ccgcgggcga ctttgccgtc aactcctcgg
     1081 catagtcctg cacacgcgcc cgcagtcccg ccggctcgac caattcgtcg accaggcccc
     1141 agtgcagcgc ctcggcggcg gataccaggc ggccgtcata gagataacgg atggcgcgcg
     1201 gccgcccgat cagacgggcc agcgcctgtg tcgtggcgat cggcggaatg aagccgatgt
     1261 tgatttccgg ctggccgagt ctcgcgtcgc tcgcggcaaa gcgcaggtcg caatgcagcg
     1321 tcatctccag cccgccgccg acggcggtgc cgtggatggc cgccagcagc ggcttgggcg
     1381 aggcgcgcag caggcggacg atgtcgtggc agcgggtcgc ccactggcgc atcccttcgc
     1441 ccgtcatgcc cttgaagacc tgcaagtcgg cgccggcgct gaaatagcgc tcgacggcgc
     1501 tcgccagcac catcacgcgc acgcccgggt cagcgagcgt ggccaagagg acgtcgtgaa
     1561 cttcgtccac catctcgcgg gtgaaggcgt tcacgggcgg gcgattgaac tccagccagc
     1621 cgacggagcg gtcgttggta aagcggatga ccgacatggc gaggtccctc gtgttgtgag
     1681 gttcagcgga tggtgcgggc caatcgggcc agcaggatca tggcgagcag cgagagcatg
     1741 gcggcggcga aggtgagcca gagcgcgcct gacgtgccga aattgctcag cacggcggcc
     1801 atcaccggcg gggcggcggc cgagacgatg ccctgcggca aggcgaggcg gcccatataa
     1861 gcgccgaact ggccgcggcc gaacaaggcg agcggcaagg tggcgcgctg cacggctttc
     1921 agcccgttgg caatgccgta ggccgcgatg aagaccagcg ctatggcgaa gctgccgccg
     1981 tccagcaggg cgagcgccag cccgaacggc agcatggccg agccgaacac ggcggagttc
     2041 atgatcgagt agcggtggcc gaacagcagt tcgaacagcc ggatggcgat ctgcgttggc
     2101 ccgatcatcg aggccaaaaa caccgccgag gccggcgcat ggccgagccc gcgcaggatc
     2161 tcgatcatgt ggaccatggc gccggtgaac acgaaggcgc cgctggcgag cgtgagcgag
     2221 agcagcagga agacgcgcga ttggacttcc ggcgccacgc cgctgggcgc cggcgcggcc
     2281 gaggcgacga ggtgatgcgc cggcggccgg ttgggcagca ccaggaggtg gacgggcgcg
     2341 caggccaaga gatggatgcc ggcataggcc agcagggtgc cgcgccagcc cacggcg
//
LOCUS       DASWGA010000158         2474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2300110, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000158 DASWGA010000000
VERSION     DASWGA010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2300110"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1333)
                     /gene="lnt"
                     /locus_tag="VF991_03930"
     CDS             complement(<1..1333)
                     /gene="lnt"
                     /locus_tag="VF991_03930"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEX9555618.1"
                     /translation="MTLQGWRAIGAALLAGALAALAMPPLYWLPLAVLGIAAFVWLWQ
                     TAPGPQSALLRGWAWGIGHFAVGSYWIIEAFFVPPADYKLLGLPIVAGLAVLLGFFPG
                     LAAGVARRLVERWPALGGRYRRLILLALTWTAAEWLRGHLFSGYPWNPLGHVWAFATP
                     LLQGAALFGAYGLGMLTFLVLAAPAAGWRASLAALAVVGIAGLAGEWAMAATAGDGAP
                     GALVRIVQPNVPQSEKWRPENRSRQLAQLVELSRRPGFDRLAAVVWPETASPFVIEPG
                     SPALQVMARAVPPGGYLLTGAARSTKRPEDGVWNSLLVIDATGAILATYDKVHLVPLG
                     EYIPFHRQLAPVSGFIGRGSFEEGESRLTIGLPSLPAFSPVICYEVIFPAAVTGPGAR
                     PRWLLNVTNDAWFGLSSGPHQHLVSARLRAVEEGLPMIRAANTGISAVIDAY"
     gene            complement(1350..2300)
                     /locus_tag="VF991_03935"
     CDS             complement(1350..2300)
                     /locus_tag="VF991_03935"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX9555619.1"
                     /translation="MPDSTAHSTQPGVTGPASASEPPATPQAPASDVPSTGGLLRAIL
                     RKLRRREKNEAVREAIEELIEETPESDTPISEDQRVLLANILKLRDKNVADVMVPRVD
                     ISAIAADTPLDEVVRLIQAEAHSRYPVYRESLDDVIGMIHIKDVLTYWGTAKKFNLRD
                     ILRRVVFVAPTLPVLDMLLDMRRSRTHMALVVDEFGGTDGLLTIEDLVEEIVGEIEDE
                     HDVAQAPTVARRVDGTIDVNGRTPIELLEQEIGRVLSEDERREIDTVGGLIFSLLGRI
                     PERGEVVRHPSGVEFEVLDVDPRRIRRLRVRPPTSSRSAA"
BASE COUNT          412 a          850 c          865 g          347 t
ORIGIN      
        1 cgtaggcgtc gatcacggcc gagatgccgg tgttggcggc gcggatcatc ggcaatcctt
       61 cctcgaccgc acgcaagcgc gcgctgacca gatgctggtg cggtccgctg gagagcccga
      121 accaggcgtc gttggtgacg ttgagcagcc agcgtggccg cgcgcccggc ccggtgacgg
      181 ccgccgggaa gatcacctcg tagcagatca ccggcgagaa ggccggcagg ctcggcaggc
      241 cgatggtgag ccgtgattcg ccctcctcga acgagccgcg gccaatgaag cccgagaccg
      301 gcgcgagctg gcggtggaat ggaatgtact cgccgagcgg caccaggtgg accttgtcat
      361 aggtggcaag gatcgcgccc gttgcgtcga tcaccagcag cgagttccac acgccgtctt
      421 ccggccgttt ggtgctgcgc gccgcgccgg tcaggagata gccgcccggc ggcacggccc
      481 gggccatgac ctgcaacgcc ggcgagcccg gctcgatgac gaagggcgac gcggtctcgg
      541 gccataccac ggctgccaga cggtcgaagc cgggtcgccg gctcagttcc accagctggg
      601 caagctggcg ggagcggttc tccggccgcc atttctcgga ttgcgggaca ttgggctgca
      661 cgatgcgcac cagcgcaccc ggcgcgccgt ccccggcggt cgccgccatc gcccattcgc
      721 cggcgaggcc ggcaattccc accacggcca gcgctgccag cgaggcgcgc cagccggcgg
      781 ccggcgccgc cagcacgaga aacgtcaaca tgcccaagcc ataggcgccg aacagggccg
      841 cgccctgtag caaaggcgtg gcgaaggccc agacatgacc cagcggattc cacggatagc
      901 cgctgaagag gtggccacgc agccattcgg ccgccgtcca ggtgagcgcc agcaggatca
      961 ggcggcggta gcgcccgccc aaggcgggcc agcgctcgac caggcgccgc gcgacgccgg
     1021 ccgccaagcc cggaaagaag ccgaggagaa ccgccaggcc ggcgacgatc gggagaccca
     1081 gcagcttgta atcggccggc ggcacgaaga acgcctcgat gatccaatag gaaccgacgg
     1141 cgaaatggcc gatgccccac gcccagccgc gcagcagcgc gctttgcggg cccggcgcgg
     1201 tctgccatag ccagacgaaa gccgcgatgc ccagcacggc aagcggcagc caataaagcg
     1261 gcggcatggc aagtgcggcc agcgcgccgg ccagcaaagc cgcgccgatg gcgcgccatc
     1321 cctgaagcgt catcgtctcg gtgcggcgat caggcggccg accgtgacga ggtcggcggc
     1381 cgcacccgca ggcgccggat gcgccgcgga tcgacgtcga gcacttcgaa ctcgacgccc
     1441 gacggatggc ggacgacctc cccgcgctcg ggaatgcggc cgagcaggga aaagatcagg
     1501 ccgcccacgg tgtcgatttc gcgccgctcg tcttcagaca gcacgcggcc gatctcctgc
     1561 tcgaggagct cgatcggcgt gcggccgttg acgtcgatcg tgccgtcgac ccggcgcgcg
     1621 accgtcggcg cctgggcgac gtcgtgctcg tcctcgatct cgcccacgat ctcctcgacc
     1681 agatcctcga tggtcaaaag cccgtcggtg ccgccgaact cgtcgaccac cagcgccatg
     1741 tgggtgcgcg agcggcgcat gtcgagcagc atgtcgagca ccggcagggt cggcgccacg
     1801 aacaccacgc ggcgcagtat gtcgcgcaga ttgaatttct tcgcggtgcc ccagtaggtc
     1861 agcacatcct tgatgtggat catgccgatc acgtcgtcga gcgactcgcg atagaccggg
     1921 tagcgcgaat gagcctcggc ctggatcagc cgcacgacct cgtcgagcgg cgtgtcggcg
     1981 gcgatggcgc tgatatcgac ccgcggcacc atgacgtcgg ccacgttctt gtcgcgcagc
     2041 ttcaggatgt tggccaagag gacgcgctgg tcttcgctga tcggcgtgtc gctctcgggc
     2101 gtttcctcga tcagctcctc gatggcctcg cgcaccgcct cgttcttctc gcgacggcgc
     2161 agcttgcgca ggatggcgcg cagcagcccg cccgttgatg ggacgtcgga ggccggcgcc
     2221 tgaggcgtcg cgggaggttc acttgcagag gccgggccgg tgacgcccgg ctgggtactg
     2281 tgcgctgtag agtccggcat ggtcattaag ataggctatc gcccctgcgt tgcaatcaag
     2341 gatgttcctg atgcgttcct gcaaacttcc ttccggcccg gccatgccgg tcttcggcct
     2401 cgggacctgg cgcatgggcg aaagcgcgcg gcggcgcggc gaggagctcg cggcgctgaa
     2461 ggtcgggctc gagc
//
LOCUS       DASWGA010000159         2366 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_149875, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000159 DASWGA010000000
VERSION     DASWGA010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149875"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1510)
                     /locus_tag="VF991_03940"
     CDS             complement(<1..1510)
                     /locus_tag="VF991_03940"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cisplatin damage response ATP-dependent DNA
                     ligase"
                     /protein_id="HEX9555620.1"
                     /translation="MQAFAALLDALSYQPARNAKLRLIETYLRETPDPDRGWALAALT
                     GGLDFPAAKPALLRGFGEDKIGAELFHLSHDYVGDLAETLALIWETDPAAGPPPSLGE
                     VVETLQRATKMQTPAILKRWLDALDSTGRWALLKLLTGALRVGVSARLAKQAVANIGS
                     QPVDSVEEIWHGLSAPYRPLFDWLLQGAPKPSSNAGGAFLPPMLANPIDRAELDSLDP
                     AHFRAEWKWDGIRVQVAASGGVKRLYSRAGEDVSASFPDIIEAIDFDGVFDGELLVRR
                     DEAVAPFNDLQQRLNRKVVTPKMLKDHPAHVRLYDVLWLEGEDLRALSFDQRRARLEA
                     WMAQKPRQRFDLSPMVIFTDWAHLAELREAMKSDGIEGLMLKRGDSAYLAGRPKGPWF
                     KWKRDPMLADCVLMYAQRGHGKRSSFYSDFTFGCWREVGGKRELAPVGKAYFGFTDEE
                     LRWLDKWVRDHTTNRFGPVREVSPDLVLEIAFDGIARSTRHKSGLAMRFPRIN"
     gene            complement(1510..>2366)
                     /locus_tag="VF991_03945"
     CDS             complement(1510..>2366)
                     /locus_tag="VF991_03945"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HEX9555621.1"
                     /translation="ATPETLAIMRARFEDMPDTSQQPLKYGESVRVGEVDVQLVPAGH
                     ILGSAQAVLEYKGQRIVVSGDFKRRPDPTCPPFEPVPCDVFITEATFALPVFHHPSDM
                     GEIGKLLRSVATFPDHTHLVGVYALGKCQRVIKLLRAAGWDKRIWLHGSLLSLCKLYQ
                     DHGVDLGDTAHVSDAILETFKGAIVLCPPSAIADRWSRRFAEPVPAVCSGWMRVRARA
                     RQSGAELPLVISDHADWAELTQTLKDVGAPKVWVTHGREEALVHYARSIGIDAEALHL
                     AGREEEGA"
BASE COUNT          389 a          775 c          831 g          371 t
ORIGIN      
        1 gattgatgcg cgggaagcgc atggcgagcc ccgacttgtg acgggtcgag cgggcgatgc
       61 cgtcgaaggc gatctccagg accaagtcgg gcgagacctc gcgcaccggg ccgaagcggt
      121 tggtcgtgtg gtcgcgcacc catttgtcga gccagcgcag ctcctcgtcg gtgaagccga
      181 aataggcctt gccgaccggc gccagctcgc gcttgccccc gacctcgcgc cagcagccga
      241 aggtgaagtc ggaatagaac gagcttctct tgccgtggcc gcgctgggcg tacatcagca
      301 cgcagtcggc cagcatggga tcgcgcttcc atttgaacca cgggcccttg ggccggccgg
      361 cgaggtaggc gctgtcgccg cgcttcagca tcaggccctc gatgccgtcg ctcttcatcg
      421 cctcgcgcag ctcggcgaga tgggcccagt cggtgaagat caccatcggc gagaggtcga
      481 agcgctggcg cggtttttga gccatccagg cctccaggcg cgcgcggcgc tggtcgaagg
      541 aaagggcgcg cagatcctcg ccctccaacc acagcacgtc gtagagccgc acatgcgcgg
      601 gatggtcctt cagcatcttg ggcgtcacga ccttgcggtt gagccgctgc tgcaggtcgt
      661 tgaagggcgc cacggcctcg tcgcggcgca ccagaagctc gccgtcgaag acgccgtcga
      721 agtcgatcgc ctcgatgatg tcggggaagg aagccgagac gtcctcgccg gcgcgactgt
      781 agagacgttt cacgccgccc gacgcggcga cctgcacgcg gatgccgtcc catttccatt
      841 cggcgcggaa gtgggcgggg tcgagcgaat cgagctcggc gcggtcgatg gggttggcca
      901 gcatcggcgg cagaaaggcg ccgccggcgt tgctgctggg tttgggcgca ccctggagca
      961 gccagtcgaa cagcggccgg taaggcgcgg aaaggccgtg ccagatctcc tccactgaat
     1021 cgactggctg gctgccgata ttggcaaccg cctgcttggc gagccgcgcc gacacgccga
     1081 cccgcagcgc gccggtcagc agtttcagga gtgcccagcg gcccgtcgaa tcgagcgcgt
     1141 ccagccagcg cttcaggatc gccggcgtct gcattttcgt ggcgcgttgc agggtttcga
     1201 cgacttcgcc gagcgacggc ggcgggccgg cggcgggatc ggtctcccag atcagcgcca
     1261 gggtctcggc caggtcgccg acatagtcat gggagaggtg gaagagttcg gcgccgatct
     1321 tgtcctcgcc gaaaccgcgc agcaacgcag gcttggccgc cgggaaatcc aatccgccgg
     1381 tcagcgcggc cagcgcccag ccgcggtcgg gatcgggtgt ctcgcgcaga taggtctcga
     1441 tcagccggag cttggcgttg cgcgccggct ggtaggagag cgcatcgagg agtgcggcga
     1501 aggcctgcac taggcgccct cttcctcgcg gccggccagg tggagcgcct cggcatcgat
     1561 gccgatcgag cgcgcgtagt gcaccagcgc ttcctcgcgg ccgtgcgtca cccagacctt
     1621 gggtgcgccg acatccttca gcgtctgggt gagctcggcc cagtcggcat ggtcggagat
     1681 gaccagcggc aactccgcgc cgctttgccg ggcgcgggcg cgtacccgca tccagcccga
     1741 gcagaccgcc ggcacgggct cggcgaaacg ccgcgaccag cggtcggcga tggccgacgg
     1801 cggacacagc acgatggcgc ctttgaaagt ctcgaggatc gcatcggata cgtgggcggt
     1861 gtcgccgaga tcgacgccat ggtcttggta gagcttgcaa agcgacagca ggctgccatg
     1921 cagccagatc cgcttgtccc agccagccgc gcgcaagagc ttgatgaccc gctggcactt
     1981 gccgagcgcg tagacgccca ccagatgcgt gtggtcggga aaggtcgcga ccgagcgcaa
     2041 aagcttgccg atctcgccca tgtcggaggg atggtggaag accggcagcg cgaaggtcgc
     2101 ctcggtgatg aagacgtcgc acggcaccgg ctcgaacggc gggcaggtcg gatcgggccg
     2161 gcgcttgaag tcgcccgaga cgacgatgcg ctggcccttg tattcgagca ccgcctgcgc
     2221 cgatcccagt atatgacccg ctggtaccag ctgcacatcg acctcgccaa cccgcacgct
     2281 ttcgccatat ttcagcggct gctggctggt atcgggcata tcctcgaagc gggcgcgcat
     2341 gatcgccagc gtctcgggcg tggcca
//
LOCUS       DASWGA010000160         7706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1286840, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000160 DASWGA010000000
VERSION     DASWGA010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7706
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1286840"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /locus_tag="VF991_03950"
     CDS             complement(<1..687)
                     /locus_tag="VF991_03950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555622.1"
                     /translation="MTSLLELKNLRRAFYGLDVLRGVDLAVAAGGITGLIGPNGAGKT
                     TLFNVVSGLVPPDAGSIRFDGQEIAGLSPDAVSRRGLVRTFQVARGFPRLSVFQHLML
                     YGRGQPGESLWQAIVSTRAARAREAELAERAWQTARFLRLDHLIDNPATALSGGQKKL
                     LEIGRALMAEPRLVLLDEPTAGVNPTLQNEIGERLLELPRRGITVLLIEHDMGFIAHL
                     CDPVIVMAEGQ"
     gene            complement(684..1652)
                     /locus_tag="VF991_03955"
     CDS             complement(684..1652)
                     /locus_tag="VF991_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX9555623.1"
                     /translation="MSVLVTGAAGFIGSHVARALLARGEAVVGVDNFSNYYDPVLKFA
                     RLKPLRDDKSFIFLEADIADRDAMLALAEQHRDLDRIVHLAAQPGVRHSLVDPYIYVR
                     TNVMGQLVMLELAKRLPGLKHFVYASSSSVYGANRKLPFATADRVDQPMSLYAATKRA
                     DELLGETYAHLFGLKAIGLRYFTVYGPWGRPDMSPYIFAKAIHEGRPIELYHLGFVKR
                     DYSYIDDIVAGTLAVLDKPGEAAGHRLYNLGAARSEDIMTVIALFEKALGRKAEIELK
                     PGDPFDMQETAAEISDTTRDFGWKPKVSVEEGIPLFVDWFKDYNRL"
     gene            1866..5348
                     /locus_tag="VF991_03960"
     CDS             1866..5348
                     /locus_tag="VF991_03960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018431014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HEX9555624.1"
                     /translation="MPLAVTLDDKYVLESGRVYLTGTQALVRLPMMQRQRDLAAGLNT
                     AGYISGYRGSPLGGFDQALWQAKRFIKNNHIEFQPGVNEDLAATALWGTQQIHLYPGA
                     RYDGVFGMWYGKGPGVDRSGDVLKHANYAGTSRHGGVVALAGDDHMAKSSTTAHQSEP
                     AFMAAGIPVIHPASVQEYLDFGLHAFAMSRYSGLWVAFKVLSETVDSSASVHVDPHRI
                     EIHSPTDFILPADGVHIRWPDDWLGQERRVITVKQPAALAYWRANKLDRLMMGRPDAR
                     FGIVTVGKSYLDVRQALDELGIDDAEAERLGLAVYKVALVWPLETEGVSAFAQGKREI
                     LVVEEKRPLIEQQLKEALFNAPADRRPVVVGKTDERGQTLLKSDGELTPFEIASAIVS
                     RFGLDSFSTHTKQRFDALKRRAGRQVRNESGMARVPYFCSGCPHNSSTKVPEGSMAMA
                     GIGCHTLAINMERNTKTFTHMGAEGASWVGASHFSEVPHVFQNLGDGTYFHSGYLAIR
                     HAIATNTTITYKILYNDAVAMTGGQPHDGNVHPWTISQQVHAEGVRRIALVSDDPDKY
                     PVGTEWAPGTTFHHRDELDEVQRELREVKGVSVLIYDQTCAAEKRRRRKRGTYPDPAR
                     RVFINQAVCEGCGDCSTQSNCLSVVPVETEFGSKRAIDQSSCNKDFSCLNGFCPSFVT
                     IEGGSVRKGKADKKAGVAPSEPPLPAAPLLPSVADKPYGVLITGIGGTGVVTIGAIMG
                     TAAHIEGKGVTVLDQLGMAQKGGAVVSHVRVGASPEALHAVRLGAGGANLLLGCDLVV
                     SASADALARLEPGTSRAVVNTHETITGEFTRRPDLAFPANMLKLSIEAAAGAEACDFL
                     DSTGIATTLLGDSIATNMFMLGYAYQKGLVPLGHEAIERAIELNGAAVAMNLAAFRWG
                     RRAAADRAGVEALMAPADSKVVPFAKLSSTLEEIVASRAKHLTGYQNAALAERYKALV
                     EKVRVAEQPTGKSGLAEAVARTYAKLLAYKDEYEVARLYAEAAFQAELERQFEGDYRL
                     KFHLAPPLFARRDPKTGHLIKQEFGPWMLPAFKALAKLKGLRGTKVDLFGYTQERKQE
                     RALIADYEALIAELLGGLSAANHALALELAAVAAGIKGYGHIKDAHLEKARRKQAELL
                     DQWRNPQTLLRAAE"
     gene            5397..6485
                     /locus_tag="VF991_03965"
     CDS             5397..6485
                     /locus_tag="VF991_03965"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX9555625.1"
                     /translation="MPNLHIVADPPMTQKLVEAGAFAEDPLIVVDVGARGGIEWFWKA
                     FGDGVRIIAFEPDPEECGRLQATSEKNVTYLPVALGAESGTRTLHVARFAAASSFYPS
                     DSAWCSRFDIGDSLAIESQTELHTTTLREALAGQRPDFIKLDAEGAELDVLRGADLGP
                     VLGMVSEVRFTDRMSGCPTFAEFDAFCRNAGFELYDLDLYRYSRRALPYPYLYDYRDG
                     AGQPVAGPTVQGQALIGDALYFRDGLGTAQPVKLACLFEVFGLNDCAAEILQAHRDAF
                     ARWADPDLLLDLLVPEVKDQKLAFADHMTGHAAGDRMFRPSPGRRIPDPIVSHYDGVF
                     TPAWAQVPPPPPPGLCERLRRWLMGRND"
     gene            7452..>7706
                     /locus_tag="VF991_03970"
     CDS             7452..>7706
                     /locus_tag="VF991_03970"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9555626.1"
                     /translation="MNDIGLSTRKTDPVARARTLGPAIAGVADEIERTQEIPEPVLTA
                     LHESRLFRMLLPRSVGGDQVEPWVYLDAIAEIARFDGSVGW"
BASE COUNT         1321 a         2622 c         2499 g         1264 t
ORIGIN      
        1 ctggccttcg gccatcacga tcaccggatc gcaaaggtgc gcaatgaagc ccatgtcgtg
       61 ctcgatcaac agcacggtga tgccgcgccg cggcagctcg agtagccgct cgccgatctc
      121 gttctgaagc gtcgggttga cgccggcggt cggctcgtcg agcagcacca gacgcggttc
      181 ggccatcagg gcgcggccga tctccagaag cttcttctgg ccgcccgaca gggcggtggc
      241 gggattgtcg atcaggtgat cgagccgcag gaagcgcgcc gtctgccacg cccgctcggc
      301 cagttccgcc tcgcgcgcgc gcgcggcgcg cgtgctgacg atcgcctgcc acaggctttc
      361 gcccggctgg ccgcggccat agagcatcag gtgctggaac accgagagcc tgggaaagcc
      421 ccgcgcgacc tggaaggtgc gcaccagccc gcgccggctg acggcatcgg gtgaaaggcc
      481 tgcgatctcc tggccatcga agcggatcga gccggcatcc ggcggcacca ggcccgaaac
      541 tacgttgaag agcgtggtct tgcccgcccc attgggcccg atcaggccgg tgatgccgcc
      601 tgctgcgacg gcgaggtcaa cgccgcgaag cacatcgagg ccgtagaagg cgcgacgcag
      661 gtttttgagt tcgagcaggg aagtcacaga cgattgtagt ctttgaacca gtctacaaac
      721 agcggaatgc cctcttccac cgagactttg ggcttccagc cgaaatcccg cgtggtgtcg
      781 gagatctcgg cggcggtctc ctgcatgtca aagggatcgc cgggcttgag ctcgatctcg
      841 gccttgcggc cgagcgcctt ctcgaacagc gcgatcaccg tcatgatgtc ctcgcttctg
      901 gccgcgccga gattgtagag ccgatggccg gccgcctcgc cgggcttgtc gagcaccgcg
      961 agcgtaccgg ccacgatgtc gtcgatgtag ctgtagtcgc gcttcacgaa gcccagatgg
     1021 tagagctcga tcggacggcc ctcatggatc gccttggcga agatgtaggg cgacatgtcg
     1081 ggccggcccc acgggccgta gaccgtgaaa tagcgcagcc cgatcgcttt caggccgaac
     1141 aggtgggcgt aggtctcgcc caaaagctcg tcggcgcgtt tggtggcggc gtaaagcgac
     1201 atcggctggt cgacccgatc cgcggtcgcg aagggcaact tgcggttggc gccatagacc
     1261 gacgaggacg aggcatagac gaaatgcttt agacccggca gccgcttggc cagctccagc
     1321 atcaccagct ggcccatgac gttggtccgg acgtagatgt agggatcgac cagcgagtgc
     1381 cgcacgccgg gctgggccgc caagtgcacg atgcggtcga gatcgcggtg ctgctcggcc
     1441 agcgccagca tggcgtcgcg gtcggcaatg tcggcttcga ggaagatgaa gctcttgtcg
     1501 tcgcgcagcg gcttcagccg ggcgaatttc aggaccggat cgtagtagtt gctgaaattg
     1561 tcgacgccga ccaccgcctc gccgcgcgcc agcagggcgc gggcgacgtg cgatccaatg
     1621 aagcccgcgg caccggtgac gaggacggac atggcaaaag gcggcgtact ggaacggggt
     1681 tgcagaaatt taaggtggcg gacgcttaca acatttcacc gtcggacaac accttgaaac
     1741 gccgcgcagc cgcggcacgt cccggcaatg ggaaaacgtc tttttgcgcc cgcaccgcgt
     1801 tcccgattgc aagcggcaag attctgtcgc taccgtgccc tatatagatg tcagggaggt
     1861 tgcccatgcc cctcgcggtg accctggacg acaagtacgt actggaaagc ggaagagtct
     1921 acctgaccgg cacgcaggcg ctggtgcgcc tgcccatgat gcagcgccag cgcgaccttg
     1981 ccgccgggct caataccgcg ggctacatct ccggctatcg cggctcgccg ctgggcggct
     2041 tcgaccaggc gctgtggcag gccaagcgct tcatcaagaa caaccacatc gaattccagc
     2101 ccggcgtcaa cgaggacctc gcggccaccg cgctgtgggg cacccagcag atccacctct
     2161 atcccggcgc gcgatacgac ggcgtgttcg gcatgtggta cggcaaaggg cctggggtcg
     2221 accgttcggg cgatgtcctg aagcacgcca attatgccgg cacgtcgcgg catggtggcg
     2281 tcgtcgccct cgccggcgac gaccacatgg ccaagtcgtc gacgacggcc caccagagcg
     2341 agccggcttt catggcggcc ggcatcccgg tgatccaccc cgccagcgtc caggaatatc
     2401 tcgatttcgg cctgcatgcc ttcgcgatgt cgcgctactc gggtctgtgg gtggccttca
     2461 aggtgttgag cgagaccgtc gattcctcgg cctcggtcca tgtcgatccg caccgcatcg
     2521 agatccacag ccccaccgac ttcatcctgc cggccgacgg cgtgcatatc cgctggcccg
     2581 acgattggct gggacaggag cgccgcgtca tcacggtgaa gcagccggcg gcgctggcct
     2641 attggcgcgc caacaagctc gatcggctga tgatgggccg acccgatgcg cgcttcggca
     2701 tcgtcaccgt cggcaagtcc tacctcgacg tccgccaggc gctggacgag ctcggcatcg
     2761 acgatgccga agccgagcgc ctgggcctcg ctgtctacaa ggtcgccctc gtgtggccgc
     2821 tcgagaccga gggcgtctcg gccttcgccc agggcaagcg cgagatcctg gtggtcgagg
     2881 agaagcggcc gctgatcgag cagcagctca aggaggcgct gttcaatgcg ccggccgatc
     2941 gccggcccgt cgttgtcggc aagacggatg agcgcggcca gacgcttcta aagtcggacg
     3001 gcgagctgac gccgttcgag atcgcgtcgg caatcgtttc gcgcttcggc ctcgattcgt
     3061 tcagtaccca caccaagcag cgcttcgacg cgctcaagcg ccgtgcgggc cgccaagtgc
     3121 gcaacgagtc gggcatggcg cgcgtgccct atttctgctc cggctgccca cacaactcct
     3181 cgaccaaggt gccggagggt tcgatggcca tggcgggcat cggctgtcac acgctggcca
     3241 tcaacatgga gcgcaacacc aagacattta cccacatggg cgccgagggc gcgtcgtggg
     3301 tcggcgccag ccacttcagc gaggtgccgc acgtcttcca gaacctgggc gacggcacct
     3361 atttccattc gggctatctc gcgatccgcc acgcgatcgc caccaacacc accatcacct
     3421 acaagatcct ctacaacgac gccgtagcca tgaccggcgg ccagccgcac gacggcaacg
     3481 tccatccctg gaccatcagc cagcaggtcc atgccgaagg tgtgcgccgc attgccctgg
     3541 tgagcgacga tccggacaaa tacccggtcg gcaccgagtg ggcgccgggc acgaccttcc
     3601 atcaccgcga cgagctcgac gaggtccagc gcgagctgcg cgaggtcaag ggcgtctcgg
     3661 tcctgatcta cgaccagacc tgcgccgccg agaagcgccg ccgccgcaag cgcggcacct
     3721 atcccgatcc ggcccggcgg gtgttcatca accaggcggt ctgcgagggc tgcggcgact
     3781 gctcgaccca gtcgaactgc ctcagcgtcg tgccggtcga gaccgagttc ggcagcaaac
     3841 gcgccatcga ccagtcgtcc tgcaacaagg acttctcctg tctcaacggc ttctgcccga
     3901 gcttcgtgac catcgaaggc ggcagcgtcc gcaagggcaa agccgacaag aaagccggcg
     3961 tcgccccatc ggagccgccg ctgccggccg ccccgctgct gccgtcggtc gccgacaagc
     4021 cttacggcgt gctgatcacc ggcatcggcg gcactggcgt cgtcaccatc ggcgccatca
     4081 tgggcacggc cgcccatatc gagggcaagg gtgtcaccgt gctcgaccag ctcggcatgg
     4141 cgcagaaggg tggcgcggtc gtcagccatg tccgcgtcgg cgcctcgccc gaggcgttgc
     4201 acgccgtgcg cctgggcgcc ggcggcgcca acctgctgct gggctgcgac ctggtggtga
     4261 gcgccagcgc cgatgccctg gcccggttgg agcccggcac gtcgcgcgcc gtcgtcaata
     4321 cccacgagac gatcaccggc gagttcaccc gccgtcctga cctcgccttc ccggccaaca
     4381 tgctgaaact ttcgatcgag gcggcggcgg gcgccgaggc ctgcgacttc ctcgattcga
     4441 ccggcatcgc caccacgctt ctgggcgatt cgatcgccac caacatgttc atgctgggtt
     4501 atgcctacca gaagggactg gtgcctctgg gacacgaggc gatcgaacgc gccatcgagc
     4561 tgaatggcgc ggccgtcgcc atgaacctgg cggccttccg ctggggccgc cgggccgctg
     4621 ccgatcgcgc cggcgtcgag gcgctgatgg cccccgccga cagcaaggtc gtgcccttcg
     4681 ccaagctctc gagcacgctc gaggagatcg tggcgtcgcg ggcgaagcac ctcaccggct
     4741 accagaacgc cgctttggcc gaacgctaca aggcgctggt cgaaaaggtg cgcgtggccg
     4801 agcaaccgac cggcaagtcg ggcctcgccg aagccgtggc gcgcacttac gccaagctgc
     4861 tcgcctacaa ggacgaatac gaggtggcgc ggctttatgc cgaggcggcc ttccaggccg
     4921 agctcgagcg gcagttcgaa ggcgactacc ggctgaaatt ccacctggcg ccgccgctgt
     4981 ttgcccgccg cgaccccaag accggccatc tgatcaagca ggagttcggc ccctggatgc
     5041 tgccggcctt caaggcgctg gccaagctga agggcctgcg cggcaccaag gtcgatcttt
     5101 tcggctacac ccaggagcgc aagcaggaac gcgctctgat cgccgactac gaggcgctga
     5161 tcgccgagct tctaggcggc ctcagcgcgg ccaatcatgc gcttgccctc gagctcgccg
     5221 cggtggccgc gggcatcaag ggctacggcc acatcaagga cgcccatctc gagaaggccc
     5281 ggcgcaagca ggccgagctc ttggatcagt ggcgcaatcc gcagacgctg ctgcgcgcgg
     5341 cggagtgacc cgcgatccaa tgccatccgc cgcgcggtgg tgtagatagc gcggccatgc
     5401 cgaatcttca catcgtcgcc gacccgccga tgacacaaaa gctcgtcgaa gcgggcgcct
     5461 ttgccgagga cccgctgatc gtcgtcgatg tcggcgcccg cggcggtatc gagtggttct
     5521 ggaaggcttt cggggacggc gtgcgcatca tcgcgttcga acccgatccc gaggaatgcg
     5581 gccgcctcca ggcgacctcg gaaaagaacg ttacctacct gccggtggca ctcggcgccg
     5641 aaagcggcac gcgcaccctg catgtcgccc gcttcgcggc ggcgagctcg ttctatccca
     5701 gcgacagcgc gtggtgcagc cgcttcgaca tcggcgacag cctggcaatc gagtcccaga
     5761 ccgagctgca caccacgacc ctgcgcgagg cgctggcggg ccagcgaccc gacttcatca
     5821 agctcgatgc cgaaggcgcc gaactcgacg tgctgcgagg ggccgatctt ggcccggtgc
     5881 tgggcatggt ctcggaagtg cgtttcaccg acaggatgtc gggctgtccg acctttgccg
     5941 agttcgacgc cttctgccgc aacgccggct tcgagctcta cgatctcgac ctctaccgct
     6001 acagccggcg cgcgctgcct tacccctacc tatacgacta tcgtgacggt gccggccaac
     6061 ccgtagccgg tccgaccgtt caagggcagg cgctgatcgg cgacgccctt tactttcgcg
     6121 acgggctcgg caccgcgcag ccggtcaagc tcgcctgcct gttcgaagtc ttcggcttga
     6181 acgattgcgc cgcggaaatt ctgcaggccc atcgcgacgc ctttgcccga tgggcggacc
     6241 ccgatctctt gctcgacctg ctcgtgccgg aagtcaaaga ccagaaacta gcctttgcag
     6301 atcatatgac tggccatgcc gcgggcgatc ggatgttccg gccgagcccc ggcaggcgca
     6361 tccccgatcc catcgtcagc cactacgatg gcgtcttcac cccggcgtgg gcgcaggtgc
     6421 cgccgccacc gccgcccgga ctatgcgaaa ggttgcgccg ctggctgatg ggaagaaatg
     6481 attagcgccc tattgctccg cgctcgcccc gggaagctcc cggggcttgc ggggcgtggc
     6541 cgccctctcg acgccggctg cgccgaaggg cgcttgcggc atcagtgcaa tggccggctt
     6601 ttggctcggc gcccgggcga ttttgggcgg gctgctgcgg ccgatagcac gcaggagctg
     6661 gcgctctgcg accaatgatt cgtgccggac aagggctgat aatttcgacg gcattgagcg
     6721 cctccccctg gcattgcccc aatttcaacg ccaaagaagc ctggaagttg ccaatttatc
     6781 acattccttc gtcgattctt gtcaggcgtg tgatcaagct gtgaggtttg acgggtcccg
     6841 caacaaggcc cgcaacaagg attgacggac cgcatttgtt tgccagcgcg tcggtccacc
     6901 ggcaacgccg acagcgctct ccccaaattt gccggcccgc ccggctcctg gatggagtcg
     6961 ggcgggacga gaggattgct caaacgatcg gccgcccccc ttggccggcc cttcctttcc
     7021 caaagatcgg gcgcgattta gcggccgagc gggcggatgc tgccgttgcc gctggcaccc
     7081 cgctgtccga ggccggaggc gtcacgacgg aaccaccgcc gatgatgccg cccgtcgccg
     7141 cgccgttcac accgcctgaa gaagtgccgg tgccggcgcc ggcgcccgcc gccgcaccgc
     7201 cgcccgcagg accggatgtc tgagcctgtg ccagcgaggc cacgaaggta gcgcaggcaa
     7261 gcgcaagaaa ccgcgtcttc gtcagttcac tcctccgagg cttgatcctg tgtgaactcg
     7321 ccctgccgaa gttgcgcgca ccgaatggcg catagcggtt ctgcactgac ggctatcgaa
     7381 tcggcggcat caattgacaa ccgctcttgc ccacgcgtcc aatagtcggc cgtgatgctg
     7441 gaggtcgtcc gttgaacgac ataggtctct caacccgcaa gaccgatccc gtcgcccgcg
     7501 cccgcacgct ggggccggcg atcgccggcg tggccgacga gatcgagcgc acgcaggaga
     7561 ttcctgagcc ggtgctgacg gcgctgcacg aatcgcggct gttccgcatg ctgttgccgc
     7621 gttcggtcgg cggcgatcag gtcgagccgt gggtctatct cgacgccatt gccgagattg
     7681 cgcggttcga cgggtcggtc ggctgg
//
LOCUS       DASWGA010000161         4564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_778817, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000161 DASWGA010000000
VERSION     DASWGA010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4564
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_778817"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..728
                     /locus_tag="VF991_03975"
     CDS             <1..728
                     /locus_tag="VF991_03975"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9555627.1"
                     /translation="FFQHVNAMDEVRAIVVSGAGRAFCAGADISGGSSAFQVWNDGNK
                     PQKRDPSDSITLAIFNCLKPIVAAINGAAVGVGITMCLPMDVRMMSTSARIGFVFNKR
                     GMAMEAGSCWFLPRLVGMQQAQEWVMTAELFGAEEALKGGLVRSIHAPDELLAAAQAL
                     AKKFAASSSSAVAAAVNRRLMWSMWGAQDPLDAVTLDLQCVGYLAAGADAQEGIKSFF
                     EKRAPTFPLKPSKDMPPFGPWAK"
     gene            complement(766..2472)
                     /locus_tag="VF991_03980"
     CDS             complement(766..2472)
                     /locus_tag="VF991_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9555628.1"
                     /translation="MSQTVAEVIVETLQAAGVKHCWGVPGDTLNYVTDAIRRSGIKWV
                     HVRHEEVGGFAAGAEALLTGELTACAGSCGPGSLHFINGLFESHRNRAPVVLIASQIT
                     SEERDFDFPQEVDFEQVYRSCSVFCSEIRSPAQARRKTAMAAQAALAKRGVAVLILPV
                     DISKAAAPDEPAFAVHRAAPLLRPSDAELDRIAEIVNSGKKVVIYGGSGCQGAHDEIV
                     ALADRLKAPIAHTSRAKDFLEYDNPFNVGMTGMLGTAGGYHTVKSCDTLLLLGCDFAW
                     RQFYPDNARIIQVDIDPTHLGRRHPVELGVVGDIKATAAALLSRVAARTDRGFLDDCL
                     ARHSKAVEALDKRATTHAGKIHPQYFASLIDRHAEPDAIFTADGGSPMVWLLRHIKAN
                     GRRRTLTSLTHGTMANAMPQALGAKRAFPGRQVISMSGDGGLSMLMGDLLTAIQEKIP
                     IKVALFNNGALGFVELEMKVEGLLDAYTNLENPDFSRVAEAIGFHARRVERADDLEAA
                     VKDWLAQPGPALLDVVTSRMELVMPPFIGAEHAFGTALYSAKALLGGRAGDVWDLVTE
                     NL"
     gene            2663..4195
                     /locus_tag="VF991_03985"
     CDS             2663..4195
                     /locus_tag="VF991_03985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555629.1"
                     /translation="MARDQKGASEVYYSLVRDSRPLTEILREAVRIHAPYTHVPYHER
                     LDDGFVNFVNNDHCLLSARSTLHLSKMLPGGASGLPMAQTIWYIPTGLDIWNQKIAKA
                     PGHYARGFQMPDGPPPVPVVHWPDQAPKALDGPLKDRLGQWMTLVHRGQVVDAYRVFL
                     GLMENPAERRAALAELCFAGLIDVQDRSLHNRSYTTGHKSFRARATVELGEAIGWESA
                     HDVLYAGALDIAVGPRWYSLYEVACNAITIYLEGQALHAVPYSGTTEQERAILANNKA
                     PLDANETEALIEIILRQPEPAYLPHLTALLKAGKSPRAILDAIQVGAGQVAIETHGEL
                     NFSLPQHCYEYCNTLGWFWDKFDHPQRLKLLYLAAAYLNQNAWHQKLTGDLTPSRIEK
                     PANTGSLAANEMADRVEAACIALNAPQALGWVQAYLDSGQDTAPLVRALALACSRLGN
                     DPHNQEITLCMLEDFGKNRNPHRGRLLLAAAQHTARHRKYGDPLDCSRRFGKALGVAE
                     LN"
     gene            4294..>4564
                     /locus_tag="VF991_03990"
     CDS             4294..>4564
                     /locus_tag="VF991_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX9555630.1"
                     /translation="MAYVFDLGNPATNANPFPEFARLRAEDPVHWSPVMKAWIITRYA
                     DVRQVALNNRQISADRLMPFFKTNAEYQRGSIESLVRYLTHWMVFR"
BASE COUNT          782 a         1542 c         1474 g          766 t
ORIGIN      
        1 acttcttcca gcacgtgaac gcgatggacg aagtgcgtgc catcgtcgtc agcggcgccg
       61 gccgggcctt ctgcgccggc gccgatatct cgggcggcag cagcgccttc caggtgtgga
      121 acgacggcaa caagccgcag aaacgcgatc ccagcgattc gatcacgctg gcgatcttca
      181 attgcctgaa accgatcgtg gcggcgatca acggcgcggc ggtgggcgtc ggcatcacga
      241 tgtgcctgcc gatggatgtg cggatgatgt cgacttccgc ccgcatcggc ttcgtcttca
      301 acaagcgcgg catggcgatg gaagccggct cctgctggtt cctgccaagg ctcgtcggca
      361 tgcagcaggc gcaggaatgg gtgatgacgg ccgagctgtt cggcgccgag gaagcgctga
      421 aaggcgggct ggtgcgttcc atccatgcgc ccgacgagct tttagcggcg gcgcaggcgc
      481 tggcgaaaaa attcgcggcg agctcgtcgt ccgccgtagc ggccgcggtc aaccgccggc
      541 tgatgtggag catgtggggc gcccaggatc cgctcgacgc cgtcaccctc gacctgcagt
      601 gcgttggcta cctcgccgcc ggggccgacg cgcaagaggg catcaagtcg ttcttcgaaa
      661 agcgcgcgcc cacttttccc ctgaagccca gcaaggacat gccgcccttc gggccttggg
      721 cgaagtagtg ctggggacgc gccacggagt ggcgcgctcc cagcattaaa ggttttccgt
      781 caccagatcc cagacatctc cggcgcggcc gcctaaaagg gccttggccg aatagagcgc
      841 ggtgccgaac gcgtgctcgg ccccgatgaa gggcggcatg accagctcca tgcggctggt
      901 gaccacgtcg agcagcgcgg ggccgggctg ggcaagccag tcctttactg ccgcctcgag
      961 atcatcggct cgctcgaccc tgcgagcatg gaagccgatc gcctcggcca cccgcgagaa
     1021 atcgggattc tccaggttgg tgtaggcatc gagcagccct tcgaccttca tctccagctc
     1081 gacgaagccc aatgcgccgt tgttgaacaa ggccaccttg atcggaatct tctcctggat
     1141 cgcggtcaag aggtcaccca tcagcatcga cagtccgcca tcgccgctca tcgagatcac
     1201 ctggcggccg ggaaatgccc gcttggcgcc cagcgcctgc ggcatggcat tggccatggt
     1261 gccgtgcgtc aggctggtca gcgtccggcg cctgccgttg gccttgatat ggcgcagcag
     1321 ccagaccatg ggcgagccgc cgtcggccgt gaaaatggcg tcaggctcgg catgcctgtc
     1381 gatgaggcta gcaaaatatt gcggatggat cttgccggca tgcgtcgtcg cccgcttgtc
     1441 gagcgcttcg acggccttgc tgtggcgcgc caggcaatcg tcgagaaatc cgcggtcggt
     1501 gcgcgcggca acgcgtgaca acagcgcagc ggccgttgcc ttgatgtcgc cgacgacgcc
     1561 cagctcgaca ggatggcggc ggccgagatg ggtcggatcg atgtcgactt ggatgatgcg
     1621 cgcattgtcg gggtagaact gacgccacgc aaagtcgcag cccagcagca agagcgtgtc
     1681 gcagctcttc accgtgtggt agccgccggc cgtgcccagc atgccggtca tgccgacgtt
     1741 gaagggattg tcgtattcga ggaaatcctt ggcgcgtgaa gtgtgggcga tcggcgcctt
     1801 cagccggtcg gccagcgcca cgatctcgtc atgggcgccc tggcagccgg agccgccata
     1861 gatcacgacc tttttgcctg aattgacgat ctcggcgatc cggtcgagct cggcatcgct
     1921 cggccgcagc agcggcgccg cgcgatggac ggcgaaggcc ggctcatcgg gcgcggcggc
     1981 cttggagatg tcgaccggca ggatcagcac cgcgacgccg cgcttggcga gggccgcctg
     2041 ggccgccatc gcggtcttgc gtcgcgcctg ggcaggcgag cggatctcgc tgcagaagac
     2101 gctacagctg cgatagacct gctcgaaatc gacctcctgc gggaagtcga agtcgcgttc
     2161 ctcgctggtg atctggctgg cgatcagcac gacaggcgcc cggttgcgat gggattcgaa
     2221 caggccgttg atgaaatgca ggctgcccgg cccgcacgag ccggcgcagg ccgtgagctc
     2281 gcccgtcagc agcgcctcgg cgccggcggc aaagccgccg acttcctcgt ggcgcacatg
     2341 gacccatttg atgccgctgc ggcggatcgc gtcggtgacg tagttcagcg tatcgcccgg
     2401 cacgccccag caatgtttta cgccggcggc ctgcagggtc tcgacgatca cttcggcaac
     2461 ggtctggctc atgtcgactc cttgatggcg gggccgcgca ctctgccacg atgtgtgtgc
     2521 ttctgcgaaa ttgccggctt ggaaggcggc gccgacaggc gtctaatggc ggtctcgctg
     2581 gaggttgtcc atgccgcctg actctgccgt cgctgcgagt acgcgtcccg atccccgtta
     2641 tgccgcgctg caagagcgcg tcatggcccg cgaccagaag ggcgcgagcg aggtctatta
     2701 cagcctggtc cgcgacagcc ggccgctcac cgaaatactg cgcgaggcgg tgcgcatcca
     2761 cgcgccctac acccacgtgc cttatcacga gcgcctggac gacggcttcg tgaacttcgt
     2821 caacaatgac cattgcctct tgagcgcccg ctcgaccctg catctgtcga agatgctgcc
     2881 gggtggcgcc tcgggcctgc cgatggcgca gaccatctgg tacatcccga ccggcctcga
     2941 catctggaac cagaagatcg ccaaggcgcc cggccactac gcgcgcggct tccagatgcc
     3001 cgacggcccg ccgccggtgc cggtcgtgca ctggcccgac caggcgccta aagcgctcga
     3061 cgggccgctg aaggaccggc tcggccagtg gatgaccctg gtgcatcgcg gccaggtggt
     3121 cgatgcctac cgcgtcttcc tcggcctgat ggagaacccg gcggaacggc gcgcggcgct
     3181 ggccgagctc tgcttcgccg gcctgatcga cgtccaggac cgctccttgc acaatcgctc
     3241 ctacacgacc ggccacaaat ccttccgcgc ccgcgccacc gtcgagctgg gcgaggcgat
     3301 cggctgggag agcgcgcacg acgtgctcta tgccggcgcg ctcgacatcg ccgtcggccc
     3361 gcgctggtat tcgctctacg aggtggcgtg caacgccatc accatctacc tcgaaggcca
     3421 ggccctgcac gccgtgcctt atagcggcac gaccgagcag gaacgtgcga tccttgccaa
     3481 caacaaggca cccctcgatg ccaacgagac cgaggccctg atcgagatca tcctgcgcca
     3541 gcccgagccc gcctacctgc cgcacctgac ggcgctcctg aaggccggca agagcccgcg
     3601 cgcgatcctc gacgccatcc aggtcggtgc cggtcaggtc gcgatcgaga cccacggcga
     3661 gctcaacttc tccctgccgc agcattgcta tgagtactgc aacacgctcg gctggttctg
     3721 ggacaagttc gaccatccgc aacggctaaa gctgctttat ctcgcggctg cttatctcaa
     3781 ccagaatgcc tggcaccaga agctgaccgg cgacctcacg ccgtcgcgca tcgaaaagcc
     3841 ggccaataca ggttcgctgg cggcgaacga gatggccgac cgcgtcgaag cggcctgcat
     3901 tgcgctcaac gcgccacagg cgctgggctg ggtgcaagcc tacctcgaca gcggccagga
     3961 cacggcgccg ctggtgcgcg ccctggcgct cgcctgctcg cggctcggca acgatccgca
     4021 caaccaggaa atcaccctct gcatgctgga ggattttggc aagaacagga acccgcaccg
     4081 cggccgcctg ctgctcgccg ccgcccagca caccgcgcgg catcgcaagt acggcgatcc
     4141 gctcgactgc agccgccgct tcggcaaggc tctcggggtt gctgaattga actagagcgt
     4201 caaaaaagcc gtcatcccga gtgcagcgag gaacctttgg tcggcatcgc taagggttcc
     4261 tcgctgcgct cgggatgcct gtaaacacac cccatggcct acgtcttcga cctcggcaat
     4321 ccggcgacca acgccaaccc cttccccgaa ttcgcccgct tgcgggcgga ggatccggtg
     4381 cactggtcgc ccgtcatgaa ggcgtggatc atcacgcgct atgccgacgt tcggcaggtg
     4441 gcgctgaaca accggcagat ctccgccgac cggctgatgc cgttcttcaa gaccaacgcc
     4501 gagtatcagc gcggctcgat cgagagcctg gtgcgttacc tcactcactg gatggtgttc
     4561 cgcg
//
LOCUS       DASWGA010000162         2730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1540443, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000162 DASWGA010000000
VERSION     DASWGA010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1540443"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            735..2729
                     /locus_tag="VF991_03995"
     CDS             735..2729
                     /locus_tag="VF991_03995"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HEX9555631.1"
                     /translation="MLAVTISTLAMVDRAEAKCDPESPVNDKIVTCTGTTDGQNGNGT
                     IGYGTNTDIGNTINVLSGASVTGTLEGVLLHDGTINNDGLIEATGSNAGAIVAIATVT
                     VNNKSSGTIRANGANTAAIVANQDANVTSSGRIEATGIDGIGIETGGTATVNNSGAIQ
                     ASLIGIFGGEAVDSGGDVNLINSGTITATQFAVVSVNAANVINMRTGTISGNIAILAS
                     GADGIGSTITNSGAIISTAGASGTAIQLSGAADTLTLLTGSRIIGAIEMGGGSDVVNF
                     SSGKDVAQLVRLNNFTGTINTSGSAPVVHSATQIASLDPTALAQTDRTLLDFTAGVSS
                     LVQGRLNGVSPSANGAMMAMSYAPENSKAGPFTKAPSNAVGMNGTWANPAPITVWANS
                     FGGQRTQDATASTLRATSTAFGGAIGIDRRVRPDWLIGAFIGGGSSGLSVDLSSQKVD
                     TDYVFGGAYSRFEWASHFLDFTLQGGNAANKSDRLVLNNLAAGGSERARANYNGWFVS
                     PEVAYGFRQDIGNSYVLTPTARVRYVAGMFDGYSETGSAQGLSVGRRTLQNFEERGEL
                     DVSRVTTFFGGDHSLKTNLHGGVIAQQRAGDTAINAVLIGQNLAFTTPGKGSSTGAVA
                     GAGFDYHTNKNVALFGAVEGTMMSDQSRTITAKGGLRAAF"
BASE COUNT          538 a          879 c          854 g          459 t
ORIGIN      
        1 accgggcttt tttgccaccg tcgtccacgg ataggttttg tctaagcccg gttgggccga
       61 cgcaactccg cgaacttgac gccagcgtcg gggcgtcagg accacacgac ttcgccgtac
      121 gctgcaacat ctctcgtccg cacgctcttt gatcgctcac gggccgaagc ccgccctgca
      181 accatttcgc gcgcaaaacg ctgccgcgtc caccgcatcc caccctacgt ccgtgacgat
      241 cgcgatacgc ccctctggtg gggtgggatg cgaaaagttc tagaagtgat ttggggtggt
      301 tggaaacgga aatatttttg caaaggggac tcgacacaaa aatgcccggc gggcaaatca
      361 ctggagccgc ttgaccaagc tcgtcgctgc ctgcgcgtcg cttcatcatc tgttcggagg
      421 aggatgcggc cttgacgctt gcgtcgaccc ggccgcgccg tgcatcccgc aacgacaacg
      481 gttgagccga tccaggccag gacggctcaa cttcaagacg gccgaagttc gtgtcgcaaa
      541 attgcatcag ccgccgacaa tagcgcaact gtgcatttgg gtccaagccg cccgcgcctc
      601 cgtccaagtc ctgaatcgcc agcccatcta ctcagttggt cgacgtcggc gacacgccga
      661 actgagtctg gcctgggctg gagatgataa tgaagtcggc aaatccaaag ctgttgacgg
      721 gacggcacgc gctgatgctg gcggtgacga tctcgacgtt ggcgatggtc gatcgggccg
      781 aggctaagtg cgatccggag tcgccggtca acgacaagat cgtcacctgc accggcacga
      841 ccgacggtca gaacggcaac ggcaccatcg gctacggcac caataccgat atcggtaaca
      901 ccatcaacgt gctgtccggc gcgtcggtga cggggaccct cgaaggcgtc ctactgcatg
      961 acggaacgat caacaatgac ggcctcatcg aggccacggg cagcaatgcc ggcgccatcg
     1021 ttgctatcgc caccgtcacc gtgaacaata aaagctccgg cacgatacga gcgaatggcg
     1081 cgaacaccgc tgccatcgtt gctaatcaag acgccaacgt gaccagttcc ggcaggattg
     1141 aagccaccgg catcgatggt attggtatcg agaccggtgg cacagcgacc gtgaacaatt
     1201 ccggcgcaat acaagcctcc ttaattggca tcttcggtgg cgaggcggtt gacagcggcg
     1261 gcgacgttaa tctcatcaat tccggaacga tcacagcaac gcagtttgcc gtcgtgtcgg
     1321 tcaatgccgc caacgtgatc aacatgcgca ctggcaccat ctcgggcaat atcgctattc
     1381 tagccagcgg cgccgacggc atcggcagca ccatcaccaa ttcgggcgcc atcatcagca
     1441 ccgccggcgc cagtggcacg gcgatccagc tgtcgggcgc ggccgacacg ctgacgctgc
     1501 tgactggttc gcgcatcatt ggcgccatcg agatgggcgg cggcagcgat gtcgtcaatt
     1561 ttagctcggg caaggacgtc gcgcagctgg tcaggctgaa caacttcacc ggcacgatca
     1621 acaccagcgg cagtgcgccg gtggtccata gcgccaccca gatcgcctcg ctcgatccga
     1681 ccgcgctggc gcagaccgat cgcacgctgc tggatttcac cgccggggtg tcgtcgctgg
     1741 tgcagggccg cctcaacggc gtgtcgccgt cggcgaacgg cgcgatgatg gcgatgagct
     1801 acgcgcctga gaacagcaag gccgggccat tcaccaaagc gcccagcaac gctgttggga
     1861 tgaacggcac ctgggcgaac ccggcgccga tcacggtgtg ggccaacagt tttggcggcc
     1921 agcgcaccca ggacgcgacg gcttccacct tgcgcgcgac ctcgacggcg tttggcgggg
     1981 cgatcggcat cgaccgcagg gtgcggccgg attggctgat cggcgccttc atcggcggcg
     2041 gcagcagcgg gttgtcggtc gacctgagct cgcagaaggt cgacaccgat tacgtgttcg
     2101 gcggcgccta cagccgcttc gaatgggcct cgcatttcct cgacttcacg ctgcagggcg
     2161 gcaacgcggc caataaatcg gaccggctgg tgctcaacaa cctcgcggcc ggcggcagcg
     2221 agcgggcgcg cgccaattac aacggctggt tcgtcagccc ggaggtggcc tacggcttcc
     2281 gccaggatat cggcaatagt tatgtgctga cgccgaccgc acgcgtgcgc tatgtcgcag
     2341 ggatgttcga cggctactct gagaccggtt cggcgcaggg gctatcggtg ggccgccgca
     2401 cgctgcagaa tttcgaggag cgcggcgaac tcgacgtgtc cagagtgacg accttcttcg
     2461 gcggcgacca cagcctgaag accaacctgc atggcggcgt gatcgcgcag cagcgggcag
     2521 gcgacaccgc catcaacgcc gtcttgatcg gccaaaacct cgccttcacg acgccgggca
     2581 agggcagcag caccggtgcg gtggccggcg ccggcttcga ctatcacacc aacaagaacg
     2641 tcgcgctgtt cggcgcggtc gagggcacga tgatgtcgga ccagagccgc accatcaccg
     2701 ccaagggcgg cctccgcgcc gcgttctgag
//
LOCUS       DASWGA010000163         8054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_22241, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000163 DASWGA010000000
VERSION     DASWGA010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8054
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22241"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1138)
                     /locus_tag="VF991_04000"
     CDS             complement(<1..1138)
                     /locus_tag="VF991_04000"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9555632.1"
                     /translation="MSKHYDTLETRSPAEREKALMQALPQQIAHAKDNAPFFGQWLKA
                     VDPAEITSRAALAKLPVLRKSMLGEVQKKHPPMGGLITVPMSKVRHVFMSPGPIFEVD
                     TDEPDYFRGARAMYAGGFRPGDVVYNTFSYHLTPAGIMMESALRALGCAIVPGGVGNT
                     ELQLDAIAAIRPTGYVGTPSFLKILIEKGAELGKDISSIKKAFVGAEALPPSLRQMFL
                     DKGMSCLQSYGTADLGTIAYESEALEGMIVDEGVIVEIVRPGTGDPLPEGDVGEVVVT
                     TFNRAYPLIRFGTGDMSAVLSGASPCGRTNMRIKGWMGRADQRTKVRGMFVDPEQVAE
                     IARKHPGLGRLRLVIDWVDQADVMTLKVEAAQPSADLEKAMEGTI"
     gene            complement(1270..1422)
                     /locus_tag="VF991_04005"
     CDS             complement(1270..1422)
                     /locus_tag="VF991_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555633.1"
                     /translation="MSKDSVQSERALRHRQFQPARYAINNVERWFAAIAARPAFQEHV
                     LAIPLV"
     gene            complement(1520..2347)
                     /locus_tag="VF991_04010"
     CDS             complement(1520..2347)
                     /locus_tag="VF991_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555634.1"
                     /translation="MPEPLQQTAPTNVLDVASIEVIYNHVILVLKGVSLSVPEGGIVA
                     LLGGNGAGKSTTLKAISNLLRTERGEVTKGRIHCRGERVDGLTPNDLVQRGVIQVMEG
                     RHCFGHLTVEENLLTGAFIHGSKRRQIADDLEKVYHYFPRLRDRRTSQAGYTSGGEQQ
                     MTAIGRALMSRPTTILLDEPSMGLAPQLVEEIFEIVKNLNEREKVSILLAEQNTNVAL
                     RYAHYGYILENGRVVLDGDAASLRENEDVKEFYLGIGGEGRRSFRDVKHYRRRKRWL"
     gene            complement(2530..3855)
                     /locus_tag="VF991_04015"
     CDS             complement(2530..3855)
                     /locus_tag="VF991_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011993137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555635.1"
                     /translation="MRLHKAALLGAAIAAAGLTVAATAQAQNEQFIPGLIYRTGAYAP
                     NGIPFANGVADYYSLINERDGGINGVKIVYEECDTAYATDRGVECYERLKNKGPTGAA
                     YVNPLSTGITFALTEKAPVDKIPVISMGYGRSESRDGSVFQWNFPLLGTYWSAADIIM
                     QHIALKEGGFDKLKGKKIVLVYHDSPYGKEPIALLEQRAKMHGFEFTPMPVTHPGVEQ
                     KATWLQIRQNRPDYVLLWGWGVMNSTAIKEAAAVGFPRDKLFGVWWSGAEPDVRPAEG
                     GAKGYNAAMLQHGAGQFGVHAELKKYLYDKGKGVAKWDETGEVLYNRGLVNAMLGVEA
                     IRTAQKKYGNKPLTGEQVRWGIENLELSAARLKELGFEGMLQPLKVSCSDHEGTRAGR
                     IQQWDGAKWVVVSDWYQSDDKVIKPMVDAAAKKYADEKKLTVRDCSKDS"
     gene            complement(4080..5147)
                     /locus_tag="VF991_04020"
     CDS             complement(4080..5147)
                     /locus_tag="VF991_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009467584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9555636.1"
                     /translation="MLYREAGQFKTSYVADQQIFPILQDRIFVAAVIAAAFLAVPAFA
                     GPYLYTEILIPFLILSLAAIGLNILVGYCGQVSLGTGGFMAVGAYAAYNLWLRVPELN
                     NLIVVFLFGGLMSAAIGLLFGIPSLRIKGFYLAVATLASQFFLDWLFARVKWLTNYTP
                     SGSVAVGRLEVFGWHVDTPADRYLLILGIVVVATVVAKNLVRGHIGRSWMAIRDMDIA
                     AEIIGFRPLRTKLTAFAVSSFFIGIAGAMWGFLRLGSWEPLAFDINRSFQILFMVIIG
                     GLGSLLGSFLGAAFIVLTPILLNQLPGWLGVHISTALISHLEFMVFGAMIVFFLIVEP
                     HGLARLWAVAKEKLRLWPFPH"
     gene            complement(5165..6289)
                     /locus_tag="VF991_04025"
     CDS             complement(5165..6289)
                     /locus_tag="VF991_04025"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9555637.1"
                     /translation="MMGPFLETLIGGLLTGVLYSLVALGFVLIFKASGVFNFAQGAMV
                     LFAALTLARLSGEIDDKEVHLANFVVAAAILGVALALIAWYAWREYLARGAGSAERRK
                     IQILAALGALAGGCAAYAYGKGAWPLWLAIAATAAIMGLLAYAIERLVLRHLVNQEGI
                     ILFMATLGIAYFLDGFGQTLWGSDVYNIDLGLPKDPVFLFEGVFPGGLLVDPGDLVAA
                     VIAAALVAVLAIFFQKTRVGRALRAVADDHAAAQSVGIPLNTIWLIVWTVSGLVALAA
                     GLIWGAKLGVQFSISLIALKALPVLILGGFTSVPGAIVGGLIIGAGEKLSEVFLAPVL
                     IKAFDLAGGGIENWFAYVLALVFLLFRPQGLFGERIIERV"
     gene            complement(6419..7210)
                     /locus_tag="VF991_04030"
     CDS             complement(6419..7210)
                     /locus_tag="VF991_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555638.1"
                     /translation="MAERLRSFNEVLLSVENISLSFGGVRALSDISFDIAKGEIRAII
                     GPNGAGKSSMLNCINGFYHPQQGTITYKGVRRSQMRPHEAAEQGIGRTFQNIALFRGM
                     STLDNIMTGRNLRMKTGLFWQALHFGPARREEIEHRRAVERIIEFLEIQHIRKVPVGQ
                     LPYGLQKRVELGRALAAQPELLLLDEPMAGMNIEEKQDMCRFVLDANDEFGTTICLIE
                     HDMEVVMDISDRVVVLDYGKKIGDGVPAEIKQNEAVITAYLGVGH"
     gene            complement(7216..>8054)
                     /locus_tag="VF991_04035"
     CDS             complement(7216..>8054)
                     /locus_tag="VF991_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX9555639.1"
                     /translation="NMKQLYGQTEASVFVTIHPDGEVFSDTVGKPVSKVELRIAESGE
                     VLYRSPGVFKEYFKNPEATNDTKTEDGWVHTGDAGYLDERGHLRIIDRARDVGKLNDG
                     TLFAPKFIENKLKFFPHINEAVAFGHGRDYVAAFVNIDMTAVGDWAERRHIAYASYQE
                     LAGHKQVYDLVQSEIERVNRDLAADPRMAGAQIRRFLILPKALEADDGELTRTNKVRR
                     GFIGERYGRLVDALYDGSRNAHIKVDVTFEDGRKGMIEGDVEIRELAPHTASAPLLRK
                     AS"
BASE COUNT         1368 a         2600 c         2694 g         1392 t
ORIGIN      
        1 ggatggtgcc ctccatcgcc ttctcgaggt cggccgaggg ctgggcggct tcgaccttga
       61 gcgtcatgac gtcggcctgg tcgacccagt cgatcaccag gcgcaggcgg cccaaaccgg
      121 gatgcttcct ggcgatttcg gcgacctgct cgggatcgac gaacatgccg cgcaccttgg
      181 tgcgctggtc ggcgcggccc atccagccct tgatgcgcat gttggtgcgc ccgcacgggc
      241 tggcgcccga cagcaccgcc gacatgtcgc cggtaccgaa gcggatcagc ggataggcgc
      301 ggttgaaggt ggtgaccacg acctcgccga catcgccctc gggcagcgga tcgccggtgc
      361 cgggccgcac gatctcgacg atcacgccct cgtcgacgat catgccttca agcgcctccg
      421 attcgtaggc gatggtgccg agatcggccg tgccatagct ctgcaggcag gacatgccct
      481 tgtccaagaa catctgacgc agcgacggcg gcaaggcttc ggcgccgaca aaggctttct
      541 tgatcgagga gatgtctttg ccgagctcgg cgcctttctc gatcaggatc ttcaggaacg
      601 agggcgtgcc gacatagccg gtcggcctga tggcggcgat ggcgtcgagc tgcagctcgg
      661 tgttgccgac gccgcccggc acgatggcgc aaccgagcgc ccgcagcgcc gactccatca
      721 tgatgccggc gggggtcagg tgataggaga aggtgttgta gaccacgtcg ccgggccgga
      781 agccgccggc gtacatggcg cgcgcgccgc ggaaatagtc gggctcgtcg gtgtcgacct
      841 cgaagatcgg gccgggcgac atgaagacat ggcgcacctt gctcatcggc acggtgatca
      901 gtccgcccat cggcgggtgt ttcttctgga cctcgcccag catcgacttg cgcagcaccg
      961 gcaacttggc gagcgccgcg cgcgaggtga tctcggccgg gtcgacggct ttcaaccact
     1021 ggccgaagaa cggcgcattg tccttggcgt gggcgatctg ctgcggcaag gcctgcatca
     1081 aggccttttc gcgctcggcc ggcgagcggg tttccagggt gtcgtagtgc ttggacatgg
     1141 gcgtttcctc gagctttgca gccacggtag ccgccgcgac ggcaccttgc caaggcggct
     1201 cgagaaaccg cgatcacccg aatgccgcgc agacgctaca aagttggtgt cctcgactgc
     1261 cgggccaact cacaccagcg gaatggcgag cacgtgctcc tggaaggcag gccgcgccgc
     1321 gatcgcggca aaccagcgct cgacgttgtt gatcgcatat cgcgccggct ggaactgccg
     1381 atggcgtaaa gcccgttctg attggacgga atctttgctc attcggaccg cgggcgtctc
     1441 gcccgctcat gatcatgagg cgggcgagac gcccgcggtc cggaagacta tgacgcgcca
     1501 ctggagtggc gcgcgccagc tacagccacc tcttgcgccg gcggtagtgc ttgacgtcgc
     1561 ggaacgagcg gcggccttcg ccgccgatgc cgagatagaa ttccttgacg tcctcgtttt
     1621 cgcgcaacga cgcggcatcg ccgtcgagca ccacgcggcc gttctccagg atgtagccgt
     1681 aatgggcgta gcgcagcgcc acgttggtgt tctgctcggc cagcaggatc gagaccttct
     1741 cccgctcgtt gaggtttttg acgatctcga agatctcctc gacgagctgc ggcgccaggc
     1801 ccatcgacgg ctcgtcgagc aggatggtgg tgggccggct catcagggcg cggccgatcg
     1861 ccgtcatctg ctgctcgccg cccgaggtgt agccagcctg gctggtgcgc cggtccctga
     1921 gccgcgggaa gtagtggtag accttctcga ggtcgtcggc gatctggcgg cgcttgctgc
     1981 cgtggatgaa tgcgccggtc agcaggttct cctcgaccgt gagatggccg aagcaatggc
     2041 ggccctccat cacctggatg acgccgcgct ggaccaggtc gttgggcgta agcccgtcga
     2101 cccgctcacc gcggcaatgg atccggccct tggtgacttc gccgcgctcg gtccgcagca
     2161 ggttggagat cgccttcaag gtcgtcgact tgcccgcacc gttgccgccc agcagcgcca
     2221 cgatgccgcc ctcggggacg ctgagcgaca cgcccttcag caccaggatg acgtggttgt
     2281 agatcacctc gatgctggcg acgtcgagga cgttggtggg ggcggtctgt tggagtggtt
     2341 cgggcattcc tgatctttgc cgaggtcgac gttctgcgcg tcgctctccc cctccggccc
     2401 tgcgggccac ctcccccgta tgaacggggg aggaaagagg aagaaggcgt cgcctttttc
     2461 atgccttccc ctgtcttcag ggcaaggtgg cgcgaagggc gcctcagaag gcgccgagcc
     2521 cgaagggggt cagctgtcct tcgagcagtc gcgaaccgta agcttcttct cgtcggcgta
     2581 cttcttggcc gccgcgtcga ccatcggctt gatgaccttg tcgtccgact gataccagtc
     2641 ggagaccacg acccatttgg cgccgtccca ctgctggatg cggccggcgc gcgtgccttc
     2701 atgatcgctg cagctcacct tcaggggctg caacatgccc tcgaagccga gttccttcag
     2761 acgcgccgcg ctcagctcga gattctcgat gccccagcgg acctgctcgc cggtcaaggg
     2821 cttgttgccg tacttcttct gcgccgtgcg gatcgcctcg acgcccagca tggcgttgac
     2881 caggccgcgg ttgtagagga cctcgccggt ctcgtcccac ttcgccacgc ccttgccctt
     2941 gtcgtagagg tacttcttga gctcggcatg gacgccgaac tggccggcgc cgtgctgcag
     3001 catggcggcg ttatagccct tggcgccgcc ctcggccggg cggacgtcgg gctccgcgcc
     3061 cgaccaccac acgccgaaca gcttgtcgcg cgggaagccg acggcggccg cctccttgat
     3121 cgccgtcgag ttcatgacgc cccagcccca cagcaggaca tagtccggcc gattctggcg
     3181 gatctgcagc caggtcgcct tctgctcgac gccgggatgg gtaaccggca tcggcgtgaa
     3241 ctcgaagccg tgcatcttgg cgcgctgctc gaggagcgcg atcggctcct tgccgtaggg
     3301 cgagtcgtga tagaccagca cgatcttctt gcccttgagc ttgtcgaaac cgccttcctt
     3361 gagcgcgatg tgctgcatga tgatgtcggc ggccgaccag taggtgccga gcagcgggaa
     3421 gttccactgg aatacgctgc cgtcgcgcga ctccgagcgg ccgtagccca tcgagatcac
     3481 cggaatcttg tcgaccggcg ccttctcggt gagcgcgaag gtgatgcccg tgctcagcgg
     3541 gttgacgtag gccgcgccgg ttgggccctt gttcttgagg cgctcgtagc actcgacgcc
     3601 gcggtccgtg gcgtaggcgg tatcgcattc ctcgtagacg atcttgacgc cgttgatgcc
     3661 gccgtcgcgt tcgttgatca agctgtagta gtcggcgacg ccgttggcga acggaatgcc
     3721 attgggggcg taagcgccgg tccgatagat caacccggga atgaattgct cgttctgggc
     3781 ctgcgccgtc gccgcaaccg tcaatccggc cgctgcgatc gccgcgccca ggagcgccgc
     3841 cttgtgaagt ctcatcgcgt tcctccttga tgtgacgggc ggtccttggc ggccgccctt
     3901 gctggaaacc ctagaacata tttcgcaacg tcgacatcac ttcctcccca cgaagtgggg
     3961 aggtggcgcc gtcatacggc gacggagggg tcatgggccc gcacccgtct tgaggcctat
     4021 gacccctccg cccgctgcgc gggcacctcc ccacgtaaga cgtggggagg caaagaagct
     4081 cagtgcggga agggccatag ccgtagtttc tccttggcga ccgcccagag gcgcgccagg
     4141 ccgtgcggct cgacgatcag gaagaagacg atcatcgcgc cgaacaccat gaattcgagg
     4201 tggctgatca gcgctgtcga tatgtggacg ccgagccagc cgggaagctg gttgagcagg
     4261 atcggcgtca gcacgatgaa ggcggcgccg aggaagctgc cgagcagcga gcccagcccg
     4321 ccgatgatga ccatgaacag gatctggaac gaccggttga tgtcgaaggc gagcggctcc
     4381 cacgaaccca gccgcaggaa accccacatc gccccggcga tgccgatgaa gaacgagctg
     4441 acggcgaagg ccgtgagctt ggtgcggagc gggcgaaagc cgatgatctc ggcggcgatg
     4501 tccatgtcgc ggatcgccat ccacgaacgg ccgatatggc cgcgcaccag gttcttggcg
     4561 accacggtgg ccaccaccac gatgcccagg atcaggagat agcgatcggc gggcgtgtcg
     4621 acgtgccagc cgaagacctc gagccggccg accgcgaccg agccggacgg cgtgtagttg
     4681 gtcagccact tcacgcgcgc gaacagccag tcgaggaaga actgtgaggc cagcgtggcg
     4741 acggcgagat agaagccctt gatcctgagc gacgggatgc cgaacagcag gccgatggcg
     4801 gccgacatga ggccgccgaa caggaacacg acgatgaggt tgttgagctc cggcacgcgg
     4861 agccacagat tgtaggcggc gtaggcaccg accgccatga agccgccggt gccgagcgag
     4921 acctggccgc aatagccgac caggatgttg agcccgatgg cggccagcga caggatcagg
     4981 aaggggatca ggatctcggt atagaggtag gggccggcga aggccggcac ggcgaggaac
     5041 gcggcggcga tcaccgccgc cacgaagatg cggtcctgca ggatcgggaa gatctgctgg
     5101 tcggcgacgt agctggtctt gaactggccg gcctcgcggt aaagcattgc ctacacccga
     5161 tccttcagac tcgttcgatg atacgttcgc cgaacaggcc ttgcggccgg aacagcagga
     5221 agaccagcgc cagcacatag gcgaaccagt tctcgatgcc gccgccggcc aggtcgaacg
     5281 ccttgatcag caccggtgcc aggaagacct cggagagctt ctcgccggcg ccaatgatca
     5341 ggccgccgac gatggcgccc ggcaccgagg tgaagccgcc caagatcagc accggcagcg
     5401 ccttcagcgc gatcagcgag atcgagaact gcacgcccag tttggcgccc cagatcaggc
     5461 cggcagcgag cgccaccagg cccgacaccg tccatacgat cagccagatc gtgttgagcg
     5521 ggatgccgac cgactgtgcc gcggcgtggt cgtcggcgac ggcgcgcagc gcccggccga
     5581 cccgggtctt ctggaagaag atggcgagta cggcgaccag cgcggcggcg atgacggcgg
     5641 ccacgaggtc gcccggatcg accagcaggc cgcccgggaa tacgccctcg aacaggaaga
     5701 ccggatcctt gggcaggcca agatcgatgt tgtagacgtc gctgccccac agcgtctggc
     5761 cgaagccgtc gaggaagtag gcgatgccga gcgtcgccat gaacaggatg atgccttcct
     5821 ggttcaccag gtgacgcagc accaggcgct cgatggcgta ggcgagcagg cccatgatcg
     5881 ccgccgtggc cgcgatggcg agccagagcg gccaggcgcc cttgccgtag gcatatgccg
     5941 cgcatccgcc ggccagcgca cccagcgccg ccaggatctg gatcttgcgc cgctcggccg
     6001 atcctgcgcc gcgcgccagg tattcgcgcc aggcgtacca ggcgatcagc gccagggcga
     6061 cacccaggat cgcggccgcc accacgaagt tggcaagatg gacctccttg tcgtcgatct
     6121 cgccggacag ccgcgccaag gtcagcgccg cgaacagcac catggcgccc tgcgcgaagt
     6181 tgaacacgcc cgaggccttg aaaatcaaca cgaagcccag cgctaccagc gaatagagca
     6241 cgccggtcaa caggccgccg atcagggttt cgagaaaggg acccatcatg gcggcctctt
     6301 cgcacggcga ttcgacgcga aaactgtcat cccgagcgaa gcgagggacc tttcctgttg
     6361 ccttaaaggc ccctcgctac gctcggggtg acagtgtgcg cttaacatca cccgcacctc
     6421 agtgacccac gccgagatag gcggtgatga cggcctcgtt ctgcttgatc tcggcgggca
     6481 cgccgtcgcc gattttcttg ccgtagtcga gcacgacgac cctgtcggag atgtccatga
     6541 ccacctccat gtcgtgctcg atcaggcaga tcgtggtgcc gaactcgtcg ttcgcgtcga
     6601 ggacgaagcg gcacatgtcc tgcttctcct cgatgttcat gccggccatc ggctcgtcga
     6661 gcaagagcag ctcgggctgg gcggcgagcg cgcggccgag ctcgactctc ttttgtagcc
     6721 cgtagggcag ctggccgacc ggcaccttgc ggatgtgctg aatctcgaga aattcgatga
     6781 tgcgctcgac cgccctgcgg tgctcgatct cctcgcggcg cgccggcccg aaatgcagcg
     6841 cctgccagaa caggccggtc ttcatgcgca ggttacggcc ggtcatgatg ttgtcgaggg
     6901 tcgacatgcc gcgaaacagc gcgatgttct ggaaggtgcg gccgatgccc tgttcggccg
     6961 cctcgtgcgg ccgcatctgg ctgcgccgca cgcccttgta ggtgatggtg ccctgttgcg
     7021 gatgataaaa gccgttgatg cagttcagca tcgacgattt gccggcgccg ttggggccga
     7081 tgatggcgcg gatctcgcct ttggcgatgt cgaagctgat atcgctgagc gccctgacgc
     7141 cgccgaacga caggctgatg ttctcgaccg acagcagcac ctcgttgaag gagcgcaggc
     7201 gctcggccat cgcgatcagc tggccttccg gagaagcggc gccgacgcgg tgtggggcgc
     7261 cagctcgcgg atctcgacgt cgccctcgat catgcccttg cggccgtcct cgaaggtgac
     7321 gtcgaccttg atgtgggcgt tgcgggaacc gtcatagagc gcatcgacca gccgcccgta
     7381 gcgctcgccg atgaagccgc ggcgcacctt gttggtgcgc gtgagctcgc cgtcgtcggc
     7441 ctcgagcgcc ttgggcagga tgaggaagcg gcggatctgg gcgccggcca tacgcggatc
     7501 ggcggcgagg tcgcgattga cccgctcgat ctcgctttgc acgaggtcgt agacctgctt
     7561 gtggccggcc agctcctggt agctcgcata ggcgatgtgg cgccgctcgg cccagtcgcc
     7621 gaccgccgtc atgtcgatgt tgacgaaggc cgcgacgtag tcgcggccgt ggccgaacgc
     7681 caccgcctcg ttgatgtgcg ggaagaattt cagcttgttc tcgatgaact tcggcgcgaa
     7741 cagcgtgccg tcgttcagtt tgccgacgtc gcgggcgcga tcgatgatgc gcaggtgccc
     7801 gcgctcgtcg agatagcccg catcgcccgt gtgcacccag ccgtcttccg tcttggtgtc
     7861 gttggtggcc tcggggttct tgaaatactc cttgaacacg ccggggctgc ggtagagcac
     7921 ctcgcccgac tcggcgatcc tgagctcgac tttcgagacc ggcttgccga ccgtgtcgga
     7981 gaagacttcg ccgtcgggat ggatggtgac gaacaccgac gcttcggtct ggccgtagag
     8041 ctgcttcatg ttga
//
LOCUS       DASWGA010000164         1565 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1919013, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000164 DASWGA010000000
VERSION     DASWGA010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1919013"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1375
                     /locus_tag="VF991_04040"
     CDS             <1..1375
                     /locus_tag="VF991_04040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9555640.1"
                     /translation="IGLDVAFASVFVVVMWLYSWQLTVMVLAAIPVWATIVIATVPLW
                     RRRLDEKFDRGAENQSFLVESVTGIETLKAMAIEPQMQRRWEDKLAAYVSASFKVTQL
                     AVVASNAIDLIGKLLTAAVLWVGAGLVIDGKLTVGELVAINMLLGRVTGPILRMAQVW
                     QDFQQIRVSVARLGDILNAPAEPAYTPNRATPPRIEGRIVFDHVHFRYQPNGRDVLSD
                     IALDIPAGQVLGVVGRSGSGKSTLTRLVQRLFVPTQGRVMIDGVDLALVDTSWLRRQV
                     GVVLQENLLFNRSVRENIALADPAAPMEAVIQAAEMAGAHEFILELPQAYDTQIDERG
                     ANLSGGQRQRLAIARALMANPRILIFDEATSALDAESEEIIQRNMQSIVKGRTVIIIA
                     HRLSAVRIAHRIVALDAGRLVEDGTHAELLRKGGRYADLWRRQMTQPSPAPPRSVVGL
                     ASAGERP"
BASE COUNT          237 a          569 c          510 g          249 t
ORIGIN      
        1 catcggtttg gacgtggcct tcgcctcggt cttcgtcgtg gtgatgtggc tctacagctg
       61 gcagctcacc gtcatggtgc tggcggccat tccggtgtgg gccaccatcg tcatcgccac
      121 cgtccctctg tggcgccgcc gcctcgacga gaagttcgac cgcggggcgg agaaccagtc
      181 cttcctggtc gagagcgtca ccggcatcga gaccctcaag gcgatggcca tcgagccgca
      241 gatgcagcgc cgctgggagg acaagctcgc cgcctatgtc agtgcgagct tcaaggtcac
      301 ccagctcgcc gtggtcgcca gcaacgccat cgacctgatc ggcaagctcc tgaccgccgc
      361 cgtgctgtgg gtcggcgccg gcctggtgat cgacggcaag ctgacggtgg gcgagctggt
      421 cgcgatcaac atgctgctgg gccgtgtcac cggcccgatc ttgcgcatgg cccaggtatg
      481 gcaggacttc cagcagatcc gcgtctcggt ggcgcggctc ggcgacatcc tcaatgcccc
      541 ggccgagccc gcctacacgc ccaaccgggc gacgccgccg cgcatcgagg gccgcatcgt
      601 cttcgaccac gtccacttcc gctatcagcc caacggccgc gacgtgctct ccgacatcgc
      661 gctcgatatc ccggccggcc aggtgctggg cgtggtcggc cgctccggct ccggcaagag
      721 cacgctcacc cgcctggtgc agcggctgtt cgtgccgacc cagggccggg tgatgatcga
      781 cggcgtcgac ctcgccctgg tcgacacctc ctggctgcgc cgccaggtcg gcgtggtgct
      841 gcaggagaac ctgctgttca accgctcggt gcgcgagaac atcgccctgg ccgaccccgc
      901 cgcgcccatg gaggcggtga tccaggcggc ggagatggcg ggcgcccacg agttcatcct
      961 cgagctgccg caggcctacg acacccagat cgacgagcgc ggcgccaacc tgtcgggcgg
     1021 ccagcgccag cgcctcgcca ttgcccgcgc cctgatggcc aatccgcgca tcctgatctt
     1081 cgacgaggcg accagcgcgc tcgacgccga atcggaggag atcatccagc gcaacatgca
     1141 gtcgatcgtg aagggtcgca ccgtgatcat catcgcccac cgcctgtcgg cggtgcgcat
     1201 cgcccaccgc atcgtcgccc tcgacgccgg ccgcctggtc gaggacggca cccatgccga
     1261 gctcttgcgc aagggcggcc gctacgccga cctgtggcgg cgccagatga cccagccgtc
     1321 gccggcaccg ccacgctcgg tcgtcggcct cgcgtcggca ggagagagac catgatcatg
     1381 cgctgggggc gctcatgctc ttccggaccg cgcgcatctc agggcgaagt ttacttcgcc
     1441 cgacgcgcgc tcaggatcat gagcgattcg ggcgaagtaa acttcgccct tgaggaggct
     1501 cgcggtccgg aagacgaaga gcggttccag ccatgaccgc cgtcgctcct tcggctcccc
     1561 tcagg
//
LOCUS       DASWGA010000165         4926 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1662745, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000165 DASWGA010000000
VERSION     DASWGA010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4926
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1662745"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1944)
                     /locus_tag="VF991_04045"
     CDS             complement(<1..1944)
                     /locus_tag="VF991_04045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555641.1"
                     /translation="MAAIRVLLAAAGVALTLPNIAAAQTAAYPPAGYSPLLFDSADTK
                     YVFRLNGTPWICRGDTFCKPIKIDGVADKDAAQATIESLGSAGPRYFLSYKQANFEKG
                     KDIALSCTEERCSKLDSIVGAAYPLGTYQIKQGDRVLTRTALLRQVEAKNGRAQLLWC
                     TETDCSELPLTRDAELYLSAMGSGRNEGRVVAWLRDKSGAVLSCAQPEEGVSDQLACE
                     KTKIVLSDFPATAAAPATPAPAPAPAPTTSDTDRNALSAAIDRAITTGDFANADRLLA
                     DAARRYAGNAAWPPLQQKLAKARADRDAQLRQAEARRLIVEARRFAQAGEFTHAEEML
                     RDADKQVPGFAEIAQARADIASLRTERGQRYRERYQYAAAIDQALASEQLWEAERLLA
                     DYAQRFNQDDEYRARAARLAQMRAAGPYQARVNEARARIAAARQAMDRNDFVEAERQL
                     ALADRSAPGFPEIGQARADLSRRRIAAEKQQDDLRLILGVIDSAFQRKQFDDAERAIE
                     DGQRRYGSYAGWADLQNRAASARRGDDRQVSDLRTQNARALELVAAARRSTTQGDFAA
                     ADKALNDAHAISANMPEIAIARAELERAKADRARQDAEIRAIAASVDAALARQQYADA
                     ERLIADGSKRYPAYGGWSDLSRRV"
     regulatory      2033..2152
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2204..4021
                     /gene="thiC"
                     /locus_tag="VF991_04050"
     CDS             2204..4021
                     /gene="thiC"
                     /locus_tag="VF991_04050"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEX9555642.1"
                     /translation="MDNIVSTASPRVTTGPLPSSQKIYVTPQAAPDLSVPLREIELSS
                     PSEPRVRVYDTTGPYTDPAVTIDVRQGLARARRAWVLGRGGVEEYDGRPIQPIDNGNV
                     KSAALLPFPHTPRPLRGLAGKPITQFEWARAGVITKEMIYVAERENLGRKQALEVAKE
                     RLADGESFGAALPEFITPEFVRAEVAAGRAIIPANINHGELEPMIIGRNFLVKINANI
                     GNSAVSSSMEEEVEKMVWAIRWGADTVMDLSTGRNIHDTREWIVRNAPVPIGTVPIYQ
                     ALEKVGGDPTKLSWEVYRDTLIEQCEQGVDYFTIHAGVRLAHVPLTASRVTGIVSRGG
                     SMMAQWCLTEHRESFLYERFGDICDIMRKYDVSFSLGDGLRPGCNADANDAAQFAELE
                     TLGELTKIAWDKGCQVMIEGPGHVPMHKIKANMDKQLRECGEAPFYTLGPLVTDIAPG
                     YDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGH
                     PAARLRDDALSKARFDFRWRDQFNLSLDPATAEKFHDETMPKEAHKTAHFCSMCGPKF
                     CSMRITQDIREYAKKGMDEMSAKFRAGGSQLYVPDKAAD"
     gene            4204..>4926
                     /locus_tag="VF991_04055"
     CDS             4204..>4926
                     /locus_tag="VF991_04055"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9555643.1"
                     /translation="MKRLRTLLGIGLGLAVVAGAGWYISQTGTSSTTQAARQGRFAAG
                     AATPVGIAAAAKGDIPVVIRALGTVTPLNTVNVKTQITGQLIKVEFKEGQMVKQGDLL
                     AVVDPRPYDVALQQSIGTMQKDEALLKNAQTDLERYKKLVAQDSIARQQYDTQISLVR
                     QYEAALVVDQAQVDAAKLNVTYTKILAPLTGRIGLRLVDQGNYVTMADATSICIIIQV
                     QPISVIFTIPEDSLPQVRQRAKS"
BASE COUNT          836 a         1612 c         1672 g          806 t
ORIGIN      
        1 cacgcggcgc gacagatcgc tccagccgcc gtaagccgga taacgcttgc tgccgtcggc
       61 gatcaggcgc tcggcgtcgg catattgctg gcgggccagg gcggcatcga ccgacgcggc
      121 gatggcgcgg atctcggcat cctggcgggc gcggtcggcc ttggcgcgct cgagctcggc
      181 gcgggcgatg gcgatctccg gcatgttggc ggagatggca tgcgcatcgt tcagcgcttt
      241 gtcggcggcg gcgaaatcac cctgggtcgt gctgcgccgc gcggcggcaa ccagctcgag
      301 cgcgcgcgca ttctgcgtcc ggagatcgct cacctggcgg tcgtcgccac gacgggcgct
      361 ggcggcgcgg ttctggagat cggcccagcc ggcataggag ccatagcgcc gctggccgtc
      421 ctcgatggca cgttcggcgt catcgaattg cttgcgttgg aaggctgagt cgatgacgcc
      481 caggatcagg cggagatcgt cctgctgctt ctcggcggcg atgcggcgac ggctgaggtc
      541 ggcccgcgcc tgcccgatct cgggaaagcc gggggcggac cggtcggcga gcgccagttg
      601 ccgctcggcc tcgacgaagt cgttgcggtc catcgcctgc cgcgccgcag cgattcgggc
      661 gcgcgcctcg ttgacccgcg cctggtacgg cccggccgcg cgcatctgcg ccaggcgggc
      721 agccctcgcc cggtattcgt cgtcctggtt gaagcgctgg gcatagtcgg cgagcaggcg
      781 ctcggcctcc cagagctgct cggacgccag cgcctggtcg atcgcggcgg catactggta
      841 gcgctcgcgg tagcgctggc cgcgctcggt gcgcaaagac gcaatatcgg cgcgcgcctg
      901 cgcgatctct gcaaagcctg ggacctgctt gtcggcgtcg cgcagcatct cttcggcatg
      961 cgtgaattcg ccagcctggg cgaagcgccg cgcctcgacg atcaaccgac gggcctcggc
     1021 ctggcgcaat tgcgcgtcgc gatcggcgcg ggccttggcg agtttctgct gcaagggcgg
     1081 ccaggcggca ttgccggcat agcgtcgcgc cgcatcggcc agcaggcggt cggcattggc
     1141 aaagtcgccg gtcgtgatgg cccgatcgat ggccgccgag agggcgttgc ggtcggtgtc
     1201 cgacgtggtc ggtgccggcg cgggcgcagg cgcaggcgtc gccggcgccg cggcggtggc
     1261 cgggaaatcg ctgagaacga tcttggtctt ctcgcaggca agctggtcgc tgacgccttc
     1321 ctcgggctgg gcgcacgaca gcacggcgcc cgacttgtcg cgcagccacg ccacgacgcg
     1381 gccctcgttg cggccgcttc ccatggcgga gaggtagagt tcagcgtcac gcgtcagcgg
     1441 caattcggaa cagtcggtct cggtgcacca caggagctgg gcgcggccgt tcttggcttc
     1501 gacctgacgc agcagcgcgg tacgcgtaag cacgcggtcg ccctgcttga tttgataggt
     1561 gccgagcgga taggcggcgc cgacgatcga atcgagcttg ctgcagcgct cctcggtaca
     1621 cgacagggcg atgtccttgc ccttctcgaa attggcctgc ttgtaagaca ggaaatagcg
     1681 cgggccggcg gagcccagcg attcgatggt cgcctgcgcg gcatccttgt cggcaacgcc
     1741 gtcgatcttg ataggcttgc agaacgtgtc gccgcggcaa atccacggcg tgccgttcag
     1801 gcgaaagacg tatttggtat cggccgaatc gaacagaagc ggcgaataac cggcgggagg
     1861 ataggccgca gtctgcgcgg ctgcgatatt gggcaacgtg agcgccaccc cagcggcggc
     1921 cagcaggact cggatcgcgg ccatttgtgt ccccgtcgta ggttatgccg acgaaaacgc
     1981 agagcgcgtg cagaggttcc cttgcggcga cggcgggcgg cgtctaaagt ccgtcccgtc
     2041 caaggggggc cccgtcaggg ggctgagata tcgaccgccg gttcggcagc gcgatgaccc
     2101 tttgaacctg atccgggtca tgccggcgaa gggacaggat gcctctcctt tgcacgacaa
     2161 aaccgggtct ccgtacgcct tttagccacg ggagatcctc gtcatggaca atatcgtctc
     2221 taccgcgtcg ccccgggtga cgaccgggcc gctgccgtct tcgcaaaaga tctatgtcac
     2281 gccccaagcc gcgcccgatc tcagcgtgcc cctgcgcgag atcgaactgt cgtcgcccag
     2341 cgaaccgcgc gtgcgtgtct acgacacgac cgggccctac accgatccgg cggtgaccat
     2401 cgacgttcgc cagggcctgg cgcgcgcgcg ccgggcctgg gtgctggggc gcggcggggt
     2461 cgaggaatat gacggccggc cgatccagcc gatcgacaac ggcaacgtga agagcgcggc
     2521 gttgctgccg tttccccaca cgccgcgccc gttgcgtggc cttgccggca agccgatcac
     2581 ccagttcgaa tgggcgcgcg caggcgtgat caccaaggaa atgatctatg tcgccgagcg
     2641 cgaaaacctc ggccgcaagc aggctctgga agtcgccaag gaacggctgg ccgacggcga
     2701 gagcttcggc gctgcgttgc ccgagttcat cacgcccgag ttcgtgcgcg ccgaagtggc
     2761 ggcagggcgc gccatcatcc cggccaatat caatcacggc gagttggagc cgatgatcat
     2821 cggccgcaat ttcctggtga agatcaacgc caatatcggc aactcggcgg tctcgtcctc
     2881 gatggaggaa gaggtcgaga agatggtgtg ggcgatccgc tggggcgccg acacggtcat
     2941 ggacctgtcg accggccgca acatccacga cacccgcgaa tggatcgtgc gcaatgcgcc
     3001 ggtgccgatc ggcaccgtgc cgatctacca ggcgctggaa aaagtcggcg gcgatccgac
     3061 caagctttcc tgggaggtct atcgcgacac cctgatcgag cagtgcgagc agggcgtcga
     3121 ctatttcacc atccatgccg gcgtgcggct ggcgcacgtg ccgctgacgg cgagccgggt
     3181 caccggcatc gtcagccgcg gcggctcgat gatggcgcag tggtgcctga ccgagcatcg
     3241 cgagagcttc ctctacgagc gtttcggcga catttgcgac atcatgcgca aatacgacgt
     3301 gtcgttctcg ctgggcgacg gcttgcggcc aggctgcaac gccgacgcca acgatgcggc
     3361 gcaattcgcc gagctcgaaa ccctgggcga gctcaccaag atcgcctggg acaaaggctg
     3421 ccaggtcatg atcgagggcc cgggccacgt gcccatgcac aagatcaagg ccaacatgga
     3481 caagcagctg cgcgaatgcg gcgaggcgcc gttctatacg ttggggccgc tcgtcaccga
     3541 catcgcgccg ggctacgacc acatcacctc gggcatcggc gccgccatga tcggctggtt
     3601 cggcacggcg atgctctgct acgtcacgcc caaggagcac ttgggtctgc cggatcgcga
     3661 cgatgtgaag gtgggcgtga tcacctacaa gatcgcggcc cacgccgccg acctcgccaa
     3721 gggccatccc gcggcgcggc tgcgcgacga tgcgctttcc aaggcgcgct tcgattttcg
     3781 ctggcgcgat cagttcaacc tctcgctcga cccggcgacg gccgagaagt tccacgacga
     3841 gacgatgccc aaggaggcgc acaagacggc gcatttctgc tcgatgtgcg ggccgaaatt
     3901 ctgctccatg cgcatcaccc aggacatccg cgagtacgcc aagaagggca tggacgagat
     3961 gagcgccaag ttccgcgccg gcggcagcca gctctacgtg cctgacaaag ccgccgactg
     4021 aggccccccg aggcggcggc cttataaacc gccgcctcgg tgatcttttg ggacctttga
     4081 ccgtttcgcg cgttatttca gggggcggga ggcgatgcct tgcgccggtc cgaccgctgg
     4141 gggagactcc accgcttcgg cccgtattag tagaaacggg cttcacttgg ggcagatcgg
     4201 acgatgaaaa gactgcggac cctgcttggg atcggcttgg ggcttgctgt agtggcgggc
     4261 gccggctggt atatttcgca gaccggaact tcttccacga cgcaagccgc gcggcaaggc
     4321 cgctttgccg cgggtgcggc aactccggtc ggcatcgccg ccgccgccaa gggcgacatt
     4381 ccggtggtga tccgtgcctt gggcacggtg acgccgctca acaccgtcaa cgtcaagacc
     4441 cagatcaccg gccagctcat caaggtcgaa ttcaaggaag gccagatggt caagcagggc
     4501 gacctgctgg ccgtggtcga tccccggccc tatgacgtgg cacttcagca gtcgatcggc
     4561 acgatgcaga aggacgaggc gctgctgaag aacgcccaga ccgacctcga gcgctacaag
     4621 aagctggtcg cccaggattc gatcgcccgg cagcaatacg acacgcagat ctcgctcgtc
     4681 cgccaatacg aagcggccct ggtggtcgac caggcccagg tcgacgccgc caagctcaat
     4741 gtcacctaca ccaagatcct ggcgccgctc accggccgca tcggccttcg cctggtcgac
     4801 cagggcaact acgtgacgat ggccgacgcg accagcatct gcatcatcat ccaggtgcag
     4861 ccgatttcgg tcatcttcac tatccccgag gattcactgc cccaggtgcg ccagcgcgcg
     4921 aagagc
//
LOCUS       DASWGA010000166         5401 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2167505, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000166 DASWGA010000000
VERSION     DASWGA010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5401
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2167505"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VF991_04060"
     CDS             complement(<1..359)
                     /locus_tag="VF991_04060"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9555644.1"
                     /translation="MQLHDLTLAELAAGLSAKHFSSRDVVDALLRRIAKADGKLHAFT
                     EVYESEARALADAADKARTSGLPLGPLHGLPVVYKDLCDIAGRIGTGGSKMFEKRVAS
                     ETSNTVERLTAAGMVPLG"
     gene            complement(361..1104)
                     /locus_tag="VF991_04065"
     CDS             complement(361..1104)
                     /locus_tag="VF991_04065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555645.1"
                     /translation="MQAELFRDRTAIVTGGARGIGLACAAKITAGGGRVALWDLDIRR
                     AQQSASALKGAIAVEVDVTGEASVAAALAETEGQLAPPDILIASAGITGPNTTVASYP
                     VDAWRQVIDINLTGVFLCNRAVAGGMAVRGRGRIVNIASVAGKEGNPNAAAYSASKAG
                     VIGLTKSLGKELATTGVLVNCVAPAVVKTELFSQMTEQHIQYMLSKIPMNRFGEVDEV
                     AEMVAWLASDLCTFATGATFDLSGGRATY"
     gene            1223..2146
                     /locus_tag="VF991_04070"
     CDS             1223..2146
                     /locus_tag="VF991_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX9555646.1"
                     /translation="MSSATPASIDATLELLKSGDYIADRSLATVLYLALKLGRPLFCE
                     GEAGVGKTEIAKVLAATLKRPLIRLQCYEGLDVASAVYEWNYARQMIEIRLAEAQGVH
                     DRGQLASDIFDERFLIRRPLLEALQPHTEGAPILLIDELDRTDEPFEAYLLEVLSDFQ
                     VTIPELGTIKAAQTPIVVITSNRTREIHDALKRRCFYHWVDFPDLKRELEILRVKAPG
                     ASERLSRQVVGFVQELRKLDLFKAPGVAESIDWATALSELNALDLDPKMINDTLGVLL
                     KYQDDIQRLQGSEAAEILQKVKSDIAAQPLG"
     gene            2302..3573
                     /locus_tag="VF991_04075"
     CDS             2302..3573
                     /locus_tag="VF991_04075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008190348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX9555647.1"
                     /translation="MDALPDIPAAPRGGKLATNIVHFARTLRTAGLKVGPGQVLRAIE
                     AVEAAGLQKRDDFYWTLHSVFVNRRDQREIFDQAFHVYWRNPRLLEKMMEMLLPQVGM
                     PADPDQSKQLSRRLQEALQPGRGEAPKDEDEPPEVEVEATFTVSDREVLQHRDFEQMS
                     QAEIDEALRAISRLRLPVPDRRTRRYRSARRGPRVDFRASLRRALRPEGLTELRKREP
                     RRRPPPLVILCDISGSMARYTRMFLHFMHAITNDRDRVYCFTFGTRLSNVSRALRNRD
                     VDVALQKASAQVADWSGGTRIGQTLHEFNNRWSRRVLGQGAVVLLITDGLDREGASGL
                     AEEMERLHKSCSRLIWLNPLLRYGSYEPKSQGNRAMLPHVDEFRPVHNLESLAGLIAA
                     LGATPSGADRRLADWQTDLRKEEPRKIGSRP"
     gene            3570..3890
                     /locus_tag="VF991_04080"
     CDS             3570..3890
                     /locus_tag="VF991_04080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEX9555648.1"
                     /translation="MSDALDVLDQVGKWKAGGKGVAIATVITTWGSSPRPVGSQLAVD
                     DSGAMVGSVSGGCIEGAVVQEALAAIADGKPRLLDFGVTDEQAWDVGLACGGKVQVFV
                     EKVN"
     gene            3895..4623
                     /locus_tag="VF991_04085"
     CDS             3895..4623
                     /locus_tag="VF991_04085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEX9555649.1"
                     /translation="MKAQTVAALQEARTNRRAVVLATRLSDAAETLVYTDKVEGALAG
                     DQAVVAAARRALGIGRSETVELGSQRIFLNVYVPPPRLIIVGAVHIAQSLAPIASLMD
                     FDVTVVDPRRAFATDSRFPGVKVMQEWADEAFEKMGLDGSTAVVTLTHDPKLDDPALE
                     AALKSDVFYIGALGSKRTHAKRKERLAEAGITDEQFARVHGPVGLNIGARSPAEIAVS
                     ILGQIVEVRARRLEALAGPKVVAA"
     gene            4620..>5401
                     /locus_tag="VF991_04090"
     CDS             4620..>5401
                     /locus_tag="VF991_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4-diphosphocytidyl-2C-methyl-D-erythritol
                     kinase"
                     /protein_id="HEX9555650.1"
                     /translation="MRFGETPIDQAAGAILAHSWRANGVNFAKGRVLSGDDVAKLKAA
                     GAATVVAARLDADDVHEDEAAATVAKALAGEGIEVTAPFTGRCNHFAREAGLAVVDHE
                     RIDALNELDESVTVATLPPFARVEPRQMVATVKIIPYAAPRTAVARAVDVAQSANQPL
                     ISIAPFKAMRAGLVQTRLPGTRDKVLDKAVGTTTKRLSSLGSALVGERRVTHDAKAIA
                     GALRELKTEGCDIFLIAGASAIVDRHDGCRAGSLELGDIVTR"
BASE COUNT          885 a         1854 c         1814 g          848 t
ORIGIN      
        1 ccgagcggca ccatgccggc ggcggtcagc cgctcgacgg tgttggaggt ctcgctcgcc
       61 acgcgcttct cgaacatctt cgaaccgccg gtgccgatcc ggccggcgat gtcgcagagg
      121 tccttgtaga cgaccggcag gccatgcagc ggacccaacg gcaaaccgga ggtgcgcgcc
      181 ttgtcggcgg cgtcggcgag cgcccgggct tcgctttcgt aaacctcggt gaaggcatgc
      241 agcttgccgt cggccttggc gatgcggcgg agcagggcgt cgacgacgtc gcgtgaggag
      301 aagtgcttgg cggagaggcc ggcggcaagc tcggccaggg taagatcatg aagctgcatg
      361 tcagtacgtc gcccttccgc cggagagatc gaaggtggca cccgtcgcga aggtgcagag
      421 gtcggaggcg agccacgcca ccatctcggc gacttcgtcg acttcgccga agcggttcat
      481 cggaatcttg gacagcatgt actggatgtg ctgctcggtc atctggctga acaactcggt
      541 cttgaccacc gccggcgcca cgcagttcac cagcacgccg gtcgtcgcaa gttccttgcc
      601 gagcgacttg gtgagcccga tgacgcccgc cttggaggcc gaataggccg cggcgttggg
      661 attgccttcc ttgccggcga ccgaggcgat gttgacgatg cggccgcggc cgcgcacggc
      721 catgccgccc gccacggcgc ggttgcacag gaagacgccg gtcaggttga tgtcgatgac
      781 ctgccgccag gcatcgaccg gatagctcgc caccgtggtg ttgggcccgg tgatgccggc
      841 acttgcgatc aggatatcgg gcggcgcgag ctggccctcc gtctccgcca gtgccgcggc
      901 gacggaagct tcgccggtga cgtcgacctc gacggcgatg gcgcctttca aggccgacgc
      961 ggactgctgg gcacgcctga tgtcgaggtc ccacagcgcc acgcggccgc cgccggcggt
     1021 gatcttggcg gcacaggcaa gcccgatccc gcgcgcgccg ccggtcacga tggccgtgcg
     1081 atcgcgaaac aactccgcct gcatacctgc ctcccaaatc cttgaattat ctggcgtttc
     1141 ctaccatatc gagccgtcac cccatccgct acactgacgc gtcggcgccg gttggcgccc
     1201 aaaagcgttt ctcgggagct tcatgtcctc cgccaccccg gcatcgatcg acgccaccct
     1261 cgagcttctg aagagcggcg actatatcgc cgatcgcagc ctcgccaccg ttctctatct
     1321 tgccctgaag ctcggccgtc cgctgttctg cgagggcgag gcgggcgttg gcaagaccga
     1381 gatcgccaag gtgctggcgg cgacgctcaa gcggccgctg atccgcctgc aatgctacga
     1441 gggcctcgac gtcgcctcgg cggtctacga atggaactat gcgcggcaga tgatcgagat
     1501 ccggctggcc gaggcgcagg gcgtgcacga ccgcggccag ctcgcgtcgg acatcttcga
     1561 cgaacgcttc ctcatccgcc ggccgctgct cgaagccctg cagccgcaca ctgaaggcgc
     1621 gcccatcctg ctgatcgacg aattggaccg gaccgacgag ccgttcgagg cctatctgct
     1681 ggaggtgttg tccgacttcc aggtgacgat ccccgagctc ggcacgatca aggcggcgca
     1741 gacgccgatc gtcgtcatca cgtcgaaccg cacgcgcgag atccatgacg cgctgaagcg
     1801 gcgctgcttc taccactggg tcgactttcc cgatctcaag cgcgagctcg aaatcctgag
     1861 ggtcaaggcg cccggcgcga gcgagcggtt gtcgcgccag gtcgtgggct tcgtccagga
     1921 gctgcgcaag ctcgacctct tcaaggcgcc tggcgtggcc gagtcgatcg actgggcgac
     1981 cgccctgtcg gagctgaacg cgctcgatct cgaccccaag atgatcaacg acacgctggg
     2041 cgtgctgctg aaataccagg acgacatcca gcgcctgcaa ggctcggaag cggccgagat
     2101 cctgcagaag gtgaaatcgg acatcgccgc ccagccattg gggtagggcg tgttccgcat
     2161 ggctcacctg cctccccgtc cattcaggct cctctccccc gctaggggga gaggttgggt
     2221 gagggggcca cacacgtcga ttccccctca cctagcctct ccccctagcg ggggagagga
     2281 atatgagggt gaacggccgt gatggacgcg ctgccagaca tcccggctgc gccgcgcggc
     2341 ggcaagctcg ccaccaacat cgtgcacttc gcgcggacgc tgcgcacggc cggcttaaag
     2401 gtcgggccgg gccaggtgct gcgcgcgatc gaggcggtcg aggcggcggg gctacagaag
     2461 cgcgacgatt tctactggac gctccattcg gtgttcgtga accgccgcga ccagcgcgag
     2521 atcttcgacc aggccttcca cgtctattgg cgcaacccgc gcctcctgga aaagatgatg
     2581 gagatgctgc tgccgcaggt cggcatgccg gccgatcccg atcagagcaa gcagctcagc
     2641 cgccgcctgc aggaagcgct gcagcccggc cgaggcgagg cgccgaagga cgaggacgag
     2701 ccgcccgagg tcgaggtcga ggcgactttc accgtctccg accgcgaggt cctgcagcat
     2761 cgcgacttcg agcagatgtc ccaggccgag atcgacgaag ccttgcgcgc gatttcgcga
     2821 ttgcgcctgc cggtgcccga ccggcgcacc cgccgctacc ggtcggcacg ccgcggtccg
     2881 cgcgtcgact tccgcgcctc gctgcggcgg gcgctccggc cggaaggatt gaccgagctg
     2941 cgcaagcgcg agccgcgccg ccggccgcca ccgctggtca tcctgtgcga catctccggc
     3001 tcgatggccc gctacacgcg catgttcctg catttcatgc acgccatcac caacgatcgc
     3061 gaccgcgtct attgcttcac cttcggcacg cgcctcagca atgtgagccg cgcgctgcgc
     3121 aaccgggatg tcgacgtcgc cctgcagaag gcctcggccc aggtcgccga ctggtcgggc
     3181 ggcacgcgga tcggccagac cctgcacgag ttcaacaaca ggtggtcgcg tcgcgtgctc
     3241 gggcagggcg ccgtcgtgct gctgatcacc gacgggctgg accgcgaagg cgcgtcgggc
     3301 ctggccgagg aaatggaacg cctgcacaaa tcctgctcac gcctgatctg gctcaacccg
     3361 ctcttgcggt acggctccta tgagcccaaa tctcagggca acagggcgat gttgccccat
     3421 gtcgatgaat tccgtccggt gcacaatctt gaaagcctgg ccgggctgat cgcggcgctg
     3481 ggggccacgc cgtccggcgc cgatcgccgg ctggccgatt ggcagacgga cctgcgcaag
     3541 gaagagccgc gcaagattgg gagtagacca tgagcgacgc acttgatgtc ctggaccagg
     3601 tcggcaaatg gaaggcgggc ggcaaaggcg tcgccatcgc caccgtgatc accacctggg
     3661 gttcctcgcc gcggcccgtc ggcagccagc tcgcggtcga cgactcaggc gccatggtcg
     3721 gctcggtatc cggcggctgc atcgagggcg ccgtggtcca ggaggcgctg gccgcgatcg
     3781 ccgacggcaa gccgcgtctg ttggatttcg gcgtcaccga cgagcaggcc tgggatgtcg
     3841 gcctcgcttg cggcggcaag gtccaggtct tcgtcgagaa ggtgaactga tcccatgaag
     3901 gcccaaaccg tcgccgccct gcaggaagcg cgaaccaacc gccgcgccgt ggtgctcgcc
     3961 acccggctga gcgatgccgc cgagaccttg gtctacaccg acaaggtgga aggtgcgttg
     4021 gccggcgacc aggccgtggt cgctgcggcc cgccgcgcgc tcggcatcgg ccgcagcgag
     4081 acggtcgagc tcggcagcca acggatcttt ctcaacgtct acgtgccgcc gccgcggctg
     4141 atcatcgtcg gcgccgtcca catcgcccag tcgctcgcgc ccatagcttc gttgatggat
     4201 ttcgacgtga cggtcgtcga tccgcgccgc gccttcgcca ccgacagccg ctttcccggc
     4261 gtgaaggtga tgcaggaatg ggccgacgag gcgttcgaga agatgggact cgatggctcg
     4321 acggccgtgg tgacgctgac gcacgatccc aagctcgacg atcccgcgct cgaggcggcg
     4381 ctcaagtcgg acgtcttcta tatcggcgcc ttgggcagca agcgcaccca tgccaaacgc
     4441 aaggaacgct tggccgaggc cggcatcacc gacgagcagt ttgcgcgagt ccacggaccg
     4501 gtcgggctca acatcggcgc caggtcgccg gccgagatcg cggtgtcgat cctgggccag
     4561 atcgtcgaag tccgcgcccg caggctcgag gcgctggccg gcccgaaggt ggtcgcggcg
     4621 tgagattcgg cgagacaccc atcgaccagg ccgccggcgc catcctggcg catagctggc
     4681 gcgccaacgg cgtcaacttc gccaagggcc gcgtgctctc gggtgacgat gtcgccaagc
     4741 tcaaggctgc cggcgcggca accgtcgtgg cggcccgcct ggatgccgat gatgtgcacg
     4801 aggacgaggc ggccgcgacg gtggccaagg cgctggccgg cgaggggatc gaggtcacgg
     4861 cgcccttcac cggccgctgc aaccatttcg ctcgcgaggc cgggctcgcc gtggtcgatc
     4921 acgagcgcat cgatgcgctg aacgagctcg acgagtcggt caccgtcgcg accttgccgc
     4981 cctttgcccg cgtcgagccg cgccagatgg tggcgacggt caagatcatc ccctatgccg
     5041 cgccgcgcac ggccgtggcg cgcgcagtcg atgtcgccca gtcggccaac cagccgctga
     5101 tttccatcgc gccgttcaag gcgatgcgcg ccggtctggt gcagacccgg ctgcccggca
     5161 cgcgcgacaa ggttttggac aaggccgtcg gcaccacgac caagcgcctc agctcgctcg
     5221 gcagtgccct ggtcggcgag cgacgggtca cgcacgacgc caaggccatc gccggcgcct
     5281 tgcgcgagct caagaccgaa ggctgcgaca tcttcctgat cgccggcgcc tcggcgatcg
     5341 tcgaccgcca cgacggttgc cgcgccggca gccttgagct tggcgacatc gtcacccgag
     5401 a
//
LOCUS       DASWGA010000167         2686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2427807, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000167 DASWGA010000000
VERSION     DASWGA010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2686
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2427807"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1109)
                     /locus_tag="VF991_04095"
     CDS             complement(<1..1109)
                     /locus_tag="VF991_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HEX9555651.1"
                     /translation="MIPELGHFALILALAVALVQGTLPLLGAARGDGRLMALGRTAAL
                     TQAFLVILAFGALTQAYVTSDFSVANVVANSHSAKPLIYKISGVWGNHEGSMLLWALI
                     LSIFGAAVAIFGANLPDSLRSRVLAIQAWIGVGFLAFLLFTSNPFERLSPAPLDGNGL
                     NPLLQDPGLAFHPPLLYLGYVGLSVTYAFAIAALLEGRVDAAWARWVRPWTLAAWCFL
                     TLGIALGSWWAYYILGWGGFWFWDPVENASLMPWLAGTALLHSAIVVEKRDSLKSWTV
                     LLAILAFSLSLLGTFLVRSGVLTSVHAFAQDPARGMFILGFLLLVTGGGLALYAWRAP
                     KLESGGLYQPISREGALILNNLLLCTLAATVLLGTL"
     gene            complement(1213..1647)
                     /gene="ccmE"
                     /locus_tag="VF991_04100"
     CDS             complement(1213..1647)
                     /gene="ccmE"
                     /locus_tag="VF991_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HEX9555652.1"
                     /translation="MTPKRRRLWLLVGSLGVLGVAAALVLTALDDNLVFFYSPSQVAD
                     KHVAPERHFRLGGLVEAGSVKKAGQEVRFTVTDTRKSVAVVYRGLLPDLFREGQGVVA
                     EGALGPDGVFVAREVLAKHDENYMPPEVAKAIKEAGQWRDKK"
     gene            complement(1647..1805)
                     /gene="ccmD"
                     /locus_tag="VF991_04105"
     CDS             complement(1647..1805)
                     /gene="ccmD"
                     /locus_tag="VF991_04105"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF016856.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HEX9555653.1"
                     /translation="MSHAVFIWAAYAVALVSLGGLVIASIVARRRARRELLARGLERP
                     RDQRARAS"
     gene            1902..2183
                     /locus_tag="VF991_04110"
     CDS             1902..2183
                     /locus_tag="VF991_04110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HEX9555654.1"
                     /translation="MPAKPILNVRLAPETLHKLDAVAAATRRTRSFIANEALEAWIDR
                     EIEILEDLQVGLEEGRAGKGIPHEKAMRQIDGAIERASKRNGRRKAARK"
     gene            2193..2507
                     /locus_tag="VF991_04115"
     CDS             2193..2507
                     /locus_tag="VF991_04115"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX9555655.1"
                     /translation="MRRVLWSPRGLALYERDVLDYLAKQGESVTRRVRGDIERTIQVL
                     AQRPIGRSGRISGTYEKPVVGQPYVIAYSLVPRDDGGEDDVLILRVIHTARDWPAGRW
                     PR"
BASE COUNT          521 a          874 c          930 g          361 t
ORIGIN      
        1 agcgtgccta agagcaccgt ggcggcgagc gtacagagca gcaggttgtt caggatcagc
       61 gcgccttcgc gactgatcgg ttggtagagc ccgcccgatt cgagcttggg tgcccgccag
      121 gcatagagcg ccagcccgcc accggtgacg aggaggagga atcccaggat gaacatgccg
      181 cgcgccggat cctgggcgaa ggcatgcacc gaggtgagca cgccggagcg caccaggaag
      241 gtgccgagca gggagagcga gaaggcgaga atggccaaaa gcaccgtcca gctcttcagc
      301 gaatcgcgct tctcgacgac gatggccgaa tgcagcagcg cagtgccggc gagccagggc
      361 atcagcgagg cgttctcgac gggatcccag aaccagaaac cgccccagcc caggatgtaa
      421 taggcccacc agctgccgag cgcgatgccc agcgtgagga agcaccaggc ggcgagagtc
      481 cacggccgca cccagcgcgc ccaggcggcg tcgacgcggc cttccaaaag ggcggcgatg
      541 gcgaaggcgt aggtcaccga caggccgaca tagccgagat agagcagcgg cggatggaag
      601 gccaagccgg gatcctgcag cagcggattg agtccgttgc cgtcgagcgg cgccggcgag
      661 aggcgctcga agggattcga cgtgaacagc aggaaggcta aaaagccgac gccgatccac
      721 gcctggatgg cgagcacgcg gctgcgcaag ctgtcgggca ggttggcgcc gaagatcgcg
      781 acggcggcgc cgaagatcga caggatcagc gcccataaca gcatcgagcc ttcgtggttt
      841 ccccacacgc cgctgatctt gtagatgagc ggcttggccg aatgcgagtt ggcgacgacg
      901 ttggcgacgg agaaatccga cgtcacgtag gcctgggtga gcgcgccgaa ggccaggatc
      961 accaggaagg cctgggtgag cgcggcggtg cggccgagcg ccatcaggcg gccgtcgccg
     1021 cgcgccgcgc cgagcagcgg caatgtgccc tgcaccagcg ccaccgccag cgccaggatc
     1081 agcgcaaaat ggccgagttc ggggatcatg gtgcgaactc atgctctttt ggaccgcgcg
     1141 catcctgcgc gctcatgatc atgagcgagc gagacgctcg cggtccggaa gaccatgaca
     1201 tcgccagcaa cgtcatttct tgtccctcca ctgtcccgct tccttgatcg ccttggcgac
     1261 ctcgggcggc atgtagttct cgtcgtgctt ggccaagacc tcgcgggcga cgaacacgcc
     1321 gtcgggcccg agcgcgcctt cggcgaccac gccctggcct tcgcggaaga gatcgggcag
     1381 caggccgcga tagacgaccg ccaccgactt gcgggtgtcg gtgacggtga agcgcacctc
     1441 ttgccccgcc ttcttgacgc tgccggcctc gaccaggccg ccgaggcgga aatggcgctc
     1501 gggggcgacg tgcttgtcgg cgacctggga gggcgaatag aaaaacacga gattatcgtc
     1561 cagcgccgtc agcaccagcg ccgccgcgac gcccagcacg cccagcgagc ccaccagcag
     1621 ccacaggcgg cggcgcttgg gagtcatcag cttgcccttg cccgctggtc gcggggccgc
     1681 tccagcccgc gcgctaaaag ctcgcggcgc gcgcgccggc gcgcgacgat gctggcgatc
     1741 accagcccgc ccaggctgac cagcgccacg gcataagccg cccagatgaa gaccgcatgg
     1801 ctcatggcgc tggcttagcc gatgcccggg gcggggagaa ggcggcaaat tcgcgggctc
     1861 accaccttgt gtatgaggct gtcatacact agtttacatc gatgcccgcc aagccgattc
     1921 tgaatgtgcg tcttgcgccc gaaacgctgc acaagctcga cgcggtggcg gcggcgacgc
     1981 ggcgcacccg ctccttcatc gccaacgaag cgctcgaggc gtggatcgac cgcgagatcg
     2041 agatcctcga ggacctgcag gtcgggctgg aagaaggccg cgccggcaaa ggcatccctc
     2101 acgaaaaagc gatgcgccag atcgatggcg cgatcgagcg cgcgagcaag cgcaacggcc
     2161 gccgcaaggc cgcgcgcaag taggcttgtg gcatgcggcg agtcctgtgg tcgccgcgcg
     2221 gcctcgcctt gtacgagcgc gatgtgctcg actatcttgc caagcaaggc gagagcgtga
     2281 cgcggcgcgt ccgaggcgat atcgagcgga cgatacaagt gctggcgcaa cgtccgatcg
     2341 gccggtccgg ccgcatttcc ggcacctatg aaaagccggt cgtgggacag ccttacgtca
     2401 tcgcctattc gcttgtgccg cgcgacgacg gtggcgagga cgacgtcctg atcctgcggg
     2461 tcatccatac ggcacgcgac tggccagcgg gacgctggcc gcgatgacta cgagagctga
     2521 tcagccgtct cgagacggcg gcggtcgatc tcggtctcgg tgcgcaccag caccagcagg
     2581 acgaacagca gcagcaacgc caccgccatc cagagcaatg gcaccaggat ggtgggatgg
     2641 atcgacggcc cgcccaggcg cgcgaccgag gccggctggt gcagcg
//
LOCUS       DASWGA010000168         5345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1161300, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000168 DASWGA010000000
VERSION     DASWGA010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5345
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1161300"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..736
                     /locus_tag="VF991_04120"
     CDS             113..736
                     /locus_tag="VF991_04120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007537623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555656.1"
                     /translation="MSDVWPWVAMAGLGAFHGLNPAMGWLFAVALGLHRNDRRVVWLA
                     LLPITVGHALSVAAVAAAIVALGIIVDGRGVTAAAGLILIAWALYHWRYGSRHRVRVG
                     LQTGLAGLGLWSFLMATGHGAGLMLWPVLMPLCFPAGVAAGTVDPFVPALLGVGLHTL
                     AMLAVTAAIAVTVYEWLGLEMLRRAWINLDLIWSLALAAAGAGLLIA"
     gene            856..2058
                     /gene="pcaF"
                     /locus_tag="VF991_04125"
     CDS             856..2058
                     /gene="pcaF"
                     /locus_tag="VF991_04125"
                     /EC_number="2.3.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0019619 - 3,4-dihydroxybenzoate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipyl-CoA thiolase"
                     /protein_id="HEX9555657.1"
                     /translation="MTEAFICDAIRTPVGRYNGGLAAMRVDDLAAHPIKALMQRNTGV
                     DWGAVDDVVYGCVNQAGEDNRNVARMAGLLAGLPVEVAGTTVNRLCGSGLEAAGHAAR
                     AVKLGEADMMIAGGVEGMTRSPYVMGKPEGPFDRSMKLEDTVLGWRFINPRMKAAYGV
                     DTMGQTAENVAGEHQISRTDQDAFAYRSQRRCKTAQDRGFFAKEIVKVCVKKGKTETV
                     VEADEHPRGDTTMEILAKLPAAFRDGGSVTAGNAAGINDGACAMIIASEAAAKANGLV
                     PRARILGTVSAGVPPRVMGIGPVPATQKLLAKLGMTLRDFDTIELNEAFAAQALAVLR
                     QLGLADDAENVNPNGGAIALGHPLGASGGRLMITALNQLEATGGKRALCTMCIGVGQG
                     IALAIERV"
     gene            complement(2206..2814)
                     /gene="pncA"
                     /locus_tag="VF991_04130"
     CDS             complement(2206..2814)
                     /gene="pncA"
                     /locus_tag="VF991_04130"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HEX9555658.1"
                     /translation="MPNEALIVVDMQNDFCEGGALAVAGATAIVPMVNRLIARHDHVV
                     LTQDWHPPGHASFASAWSGGELFSTVQFPYGPQTLWPDHCVQGTPGAAFHPELDTDKA
                     EVVIRKGFHTGIDSYSAFRENDRMTRTGLDGYLKARGFTRLVFCGLALDYCVAWSSID
                     ARQAGFDVAVVQEATAAIDLEGSKKRMLTEMRQAGIKLNATA"
     gene            complement(2819..3955)
                     /gene="tgt"
                     /locus_tag="VF991_04135"
     CDS             complement(2819..3955)
                     /gene="tgt"
                     /locus_tag="VF991_04135"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEX9555659.1"
                     /translation="MSLSFELLGRDGAARRGRIETAHGTVETPAFMPLATAGTVKAML
                     PQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKE
                     LRKLDADGVTFRSPIDGSEHRLTPERSIEIQNLLDADITMSFDECTSWPIEEDAAAFS
                     MRLSMKWAARGKRAFSERPGYGLFGIVQGSIFPALRAESAKALTNIGFDGYAVGGLAV
                     GEGQEAMFATLDVTLPLLPADRPRYLMGVGRPADIVGAVKRGIDMFDCVLPTRGGRTA
                     QAFTRRGELNLRNARHRDDLRPIDEHCACPACRRHSRAYLHHLIRAEEILASMLLTWH
                     NLQYYQDIMRGLRGAIEAGSLGHWIAAFEAEQSRGDIPPFCHGV"
     gene            complement(3952..4998)
                     /gene="queA"
                     /locus_tag="VF991_04140"
     CDS             complement(3952..4998)
                     /gene="queA"
                     /locus_tag="VF991_04140"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008598435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEX9555660.1"
                     /translation="MRVDLFDFDLPQDLIAQRPAHPRDSARLLDVAGDGLHDRSVRDL
                     PGLLHRGDLLVFNDTKVIPARLIGVRLADSGRQDVAVEALLIRDLGRGRWLAFARPAK
                     RLRPGDGLSFAGRLDAKVETKNEDGSIVLAFDTTGPAFLVALETGGAVPLPPYIRGGI
                     ADARDRADYQTLFARYDGSVAAPTAGLHFTPALMASLAAAGIATAGVTLHVGAGTFQP
                     VRVDDTDAHTMHAEWGEVPRATAHAVEATRAAGGRIVSVGTTSLRLLETVARIHGGAL
                     KPWSGQTDIFIVPGFRFRAVDLLLTNFHLPRSTLFMLVAAFAGLERMKAAYAHAVSER
                     YRFYSYGDCCLLRR"
     gene            5024..>5345
                     /locus_tag="VF991_04145"
     CDS             5024..>5345
                     /locus_tag="VF991_04145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555661.1"
                     /translation="MAVRFRCRPATIEDADGIAAVFSSSFRLLTFLPTVRTDDERRRF
                     IESVILKTCDVTVAEGEDGIVSFLARDGQEIRLLYTHPASIGAGAGSLLVDVAKASGV
                     AALEL"
BASE COUNT          849 a         1748 c         1888 g          860 t
ORIGIN      
        1 caagtggccg aagtcgcacc ggccgcacca ggttcggctc gaaggcggcg actgttcttc
       61 cgattccttc tgctatccgt gaggtgtccg ccgggcgaag ggacgcgcgg ccgtgagcga
      121 cgtctggccc tgggttgcaa tggcagggct gggagctttt cacggtctca atcccgccat
      181 gggctggcta ttcgccgtgg cgcttggcct gcatcgcaac gaccgccgcg tcgtctggct
      241 cgcgctgctg ccgatcaccg tcggacatgc attgtccgtt gccgccgtcg ccgccgcgat
      301 cgtcgcgctg ggcatcatcg tcgatggacg cggcgtgact gccgccgcag gcctgatcct
      361 gatcgcctgg gcgctctatc actggcgcta cggatcgcgc catcgcgtgc gcgtcggcct
      421 gcagaccggc ctggcgggcc tcggcctgtg gtcgtttctg atggccaccg ggcatggcgc
      481 cggtctcatg ctatggcccg tgctgatgcc gctctgcttt cccgccggcg tcgcagcggg
      541 caccgtcgat ccgttcgtgc cggcgctcct cggcgtcggc ctgcatacgc tggcgatgct
      601 ggcggtcacc gccgcgattg ccgtcaccgt ctacgaatgg ctcgggctcg agatgctgcg
      661 gcgcgcctgg atcaaccttg acctgatctg gagtctggcg cttgctgcgg cgggcgctgg
      721 gctgctgatc gcctgacgac gcgataccgg gtcacgcgag ctgggcggcg catggccccc
      781 ctgtccgtag ggcattggcc agcgtgccgg tccgatggta accgggcaga cgccaagtgt
      841 cgggagtaac ccaagatgac cgaagccttc atctgtgatg ccatccggac gccggtcggc
      901 cgctacaatg gcgggctcgc cgccatgcgc gtcgacgatc tcgccgccca tcccatcaag
      961 gcgctgatgc agcgcaacac cggagtcgat tggggggcgg tcgacgacgt ggtctatggc
     1021 tgcgtcaacc aggcgggcga ggacaaccgc aatgtcgcgc gcatggcggg ccttctggcc
     1081 ggcctgccgg tcgaagtggc gggcaccacg gtgaaccggc tgtgcggctc gggtctggag
     1141 gcggccggtc acgcggcacg cgccgtgaaa ctcggcgaag ccgacatgat gatcgcgggc
     1201 ggcgtcgaag gcatgacccg ctcgccctac gtcatgggca agcccgaagg tccgttcgac
     1261 cgctcgatga agctcgagga tacggtgctg ggctggcgct tcatcaatcc gcgcatgaag
     1321 gccgcctacg gcgtcgacac catgggccag accgccgaga acgtcgccgg cgagcatcag
     1381 atcagccgca ccgaccagga cgccttcgcc taccgcagcc agcgccgctg caagaccgcc
     1441 caggatcgcg gcttcttcgc caaggagatc gtcaaggtct gcgtcaagaa gggcaagacc
     1501 gagaccgtcg tcgaggcgga cgagcacccg cgcggcgaca ccacgatgga gatcctggcc
     1561 aagttgccgg cggcatttcg cgacggcggc tcggtgacgg cgggcaacgc cgccggcatc
     1621 aatgacggcg cctgcgccat gatcatcgcc tcggaggcgg cggccaaggc caacgggctc
     1681 gtgccgcgcg cgcgcatcct tggcacggtg tcggccggcg tgccgcctcg ggtcatgggt
     1741 atcggcccgg tgccggccac gcagaagctt ttggccaagc tcggcatgac gttgcgcgac
     1801 ttcgacacga tcgagctcaa cgaggctttc gccgcccagg cgctcgccgt gctgcgccag
     1861 ctcggccttg ccgacgatgc cgagaacgtc aatcccaatg gcggcgccat cgcgctcggc
     1921 catccgctgg gcgcctcggg cggccggctg atgatcacgg cgctcaacca gctcgaggcc
     1981 accggcggca agcgcgcgct ttgcaccatg tgcatcggcg tcggccaggg cattgcactg
     2041 gcgatcgagc gcgtttgagg gctgcgggcg tggttcggcg agggctgatc gtcgccaagt
     2101 aactcatgtc atcctgagcg cagcgaagga tctcatgccg gttgcaagcg gtgatgaggt
     2161 ccttcgctta agcgcggatc tgatccgcgc gactcaggac gacagctacg ctgtcgcgtt
     2221 gagcttgatg ccggcctggc gcatctcggt cagcatgcgc ttcttgctgc cctcgagatc
     2281 gatcgcggcg gtggcctcct gcacgacggc aacgtcgaag cccgcctggc gggcgtcgat
     2341 cgacgaccag gcgacgcagt aatcgagcgc cagcccgcaa aacaccagcc tggtgaagcc
     2401 gcgcgccttc agatagccgt cgaggccggt gcgggtcatg cggtcgttct cgcggaacgc
     2461 cgagtaggaa tcgatgccgg tgtggaagcc cttgcggatg acgacctccg ccttgtcggt
     2521 gtcgagctcg ggatggaagg cggcccccgg cgtgccttgc acgcagtggt ccggccacag
     2581 ggtctgcggc ccgtagggga attgcacggt gctgaagagt tcgccgcccg accaggcgct
     2641 ggcgaacgag gcatggcccg gcggatgcca gtcctgggtc agcacgacgt ggtcgtggcg
     2701 ggcgatcagg cgattgacca tcggcacgat cgcagtggcc cccgcgacgg ccaaggcgcc
     2761 gccctcgcag aagtcgtttt gcatgtcgac cacgatcaat gcctcgttgg gcatgtcgtc
     2821 aaactccgtg acaaaatggc ggaatgtctc cgcgactttg ttctgcctcg aatgcggcga
     2881 tccagtggcc gagtgagccg gcttcgatgg cgccccgcag tccgcgcatg atgtcctggt
     2941 aatattgcag attgtgccac gtcagcagca tcgacgcgag aatctcttcg gcgcggatga
     3001 gatggtgcag gtaggcgcgg ctgtggcgcc ggcaggccgg gcaggcgcaa tgctcgtcga
     3061 tcggccggag atcgtcgcgg tgccgcgcat tgcgcaggtt gagctcgccg cggcgcgtga
     3121 aggcctgcgc tgtacggccg ccgcgcgtcg gcaagacgca gtcgaacatg tcgatgccgc
     3181 gttttacggc gccgacgatg tcggcgggcc ggccgacgcc catcagatag cgcggccggt
     3241 cggccggcag cagcggcagg gtgacgtcga gcgtggcgaa catcgcctcc tggccctcgc
     3301 cgacggccag cccgcccacg gcataaccgt cgaagccgat gttggtgagc gccttggcgc
     3361 tctcggcacg caaagcgggg aagatgctgc cctgcacgat gccgaacagg ccgtagcctg
     3421 gccgttcgct gaacgcccgc ttgccgcgcg ccgcccactt catcgacagc cgcattgaga
     3481 aggcggcggc atcctcttcg atcggccagc tcgtgcattc gtcgaacgac atggtgatgt
     3541 cggcgtccaa aagattctgg atctcgatcg aacgctcggg cgtcagccga tgctccgaac
     3601 cgtcgatcgg cgagcggaag gtgacgccgt cggcatcgag cttgcgcagc tccttgagcg
     3661 acatcacctg gaagccgccg gaatcggtca ggatcgggcc gggccagttc atgaacctgt
     3721 gcagcccgcc cagcgccgcc accctttccg cccccggccg cagcatcagg tgaaaggtat
     3781 tgccgagcac gatctccgcg ccggtctcgg ccaccgactg cggcagcatc gccttgacgg
     3841 tgccggcggt ggcgagcggc atgaaggcgg gcgtctcgac cgtgccgtgc gcggtctcga
     3901 tccggccgcg gcgggcggcg ccatcgcggc ccaaaagttc gaaggaaagg ctcatcgccg
     3961 caacaaacaa caatcgccgt aggaatagaa gcggtatcgc tcgctcacgg cgtgcgcata
     4021 ggcggccttc atgcgctcca gcccggcgaa ggctgccacc agcatgaaga gcgtagagcg
     4081 cggcaggtgg aagttggtga gcaagaggtc gacggcgcgg aagcgaaagc ccggcacgat
     4141 gaaaatgtcg gtctggccgc tccaaggctt tagcgcgccg ccgtggatcc tcgccacggt
     4201 ctccaggagg cgcaacgagg tcgtgccgac cgacacgatg cgtccgccgg cggcgcgcgt
     4261 cgcctcgacc gcatgggcgg tggctcgcgg cacctcgccc cattcggcgt gcatggtgtg
     4321 cgcgtcggtg tcgtcgaccc ggaccggctg gaaggtcccg gcaccgacat gcagggtcac
     4381 accggccgtg gcgatgccgg cagcggcgag cgaggccatc agcgccggcg tgaaatgcag
     4441 gccggcggtg ggcgcggcta ccgagccgtc gtagcgggca aacagcgtct ggtaatcggc
     4501 gcgatcgcgt gcatcggcga tgccgccgcg gatgtagggc ggcagcggca cggcgccgcc
     4561 tgtttcgagc gcaacgagga aggcaggacc ggtggtgtcg aaggcaagca cgatcgagcc
     4621 gtcctcgttc ttggtctcga ccttggcgtc gagccggccg gcgaaggaga gaccgtcacc
     4681 cggccgcagg cgcttggcgg gacgggcgaa ggcaagccag cggcctcggc cgaggtcgcg
     4741 aatcagcagg gcttcgaccg ctacatcctg gcggccggag tcggcgaggc gcacgccgat
     4801 cagccgcgcc gggatgacct tggtgtcgtt gaagacgagc aagtcgcctc gatgcagcag
     4861 gccaggcagg tcgcggaccg agcgatcgtg cagaccatcg ccggcgacat cgagcagccg
     4921 cgccgaatcg cgcggatggg cagggcgttg ggcgatgagg tcttggggaa gatcgaagtc
     4981 gaagaggtcg acgcgcattg ggactttagg ccagtatcgg gcgatggcag tccgcttccg
     5041 atgccgcccg gcgacgatcg aggatgccga tggcatcgcc gcggtgtttt cgtcgtcctt
     5101 ccggctgctc acgttcctgc cgacggtgcg cacggacgac gagcgtcgcc gcttcatcga
     5161 gagcgtcatc ctgaagacct gcgacgtgac cgtcgcggaa ggcgaagacg gtatcgtgtc
     5221 gtttctggcg cgcgacgggc aggaaattcg cctgctttac acgcatccgg cgagcatcgg
     5281 ggcgggggcg ggctcgctgc tggtcgacgt cgccaaggcc tccggcgtcg ccgccctcga
     5341 gcttt
//
LOCUS       DASWGA010000169         1867 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_649401, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000169 DASWGA010000000
VERSION     DASWGA010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_649401"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..886)
                     /locus_tag="VF991_04150"
     CDS             complement(<1..886)
                     /locus_tag="VF991_04150"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9555662.1"
                     /translation="MTLLSEEALRPRRNWQAIITVVILLAVGFLVILPLVFLVEESLN
                     TGDPMLFPPEAYGIRNYLAIFDEDINVLINTVIIAVMATVMAILIGFTLAWILTRTNV
                     PGRDKLERLMELPYYMTPLVGALAWAVIAGPKSGFVNQLWKGLGGGGDLVDIYTHFGI
                     AWVMALFEGTVAFVMISASMKSMDPALEESARVMGASKLRTTLTVTLPLVMPGVLGAM
                     LFVFAEMLGSFAAALVLGIPGRIYVITTAIWDSTLSYPPDYGRASAMGLALFVVMFGM
                     LTFYRRVIARGSFATITGK"
     gene            complement(894..>1867)
                     /locus_tag="VF991_04155"
     CDS             complement(894..>1867)
                     /locus_tag="VF991_04155"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9555663.1"
                     /translation="EGFKTCADVDKAEAEGAFVLYSTDPEQGQAKLLASFNKMFPKIK
                     TNYVRLQAGALYAKVRTERQAKSYLVDVIQISDMGMILDFQRQGGFRQYISPEMAAFK
                     PAYKSTPEGFWTWGSVIMAGIAYNPNNVAAAEAPKKWEDLLDPKWKDAINVKVSNSGL
                     QHGVWYMLKPILGMDYFKRFGEQKPRAFDSYVQQYGRLVDGQDKIIMGAQYSGYIEFK
                     AKGAPLAFVFPETGVPTVSETYGIVADGPHPNAAELFMDWFLSPIGQQALSDALLLHS
                     PRPDVPAPAGSVPLKDMKLLIPADWNAFEKDRPEFAKEWDRIVGARR"
BASE COUNT          349 a          585 c          616 g          317 t
ORIGIN      
        1 ccttgccggt gatggtggcg aagctgccgc gcgcgatcac ccggcggtaa aaggtcagca
       61 tgccgaacat gacgacgaac agcgccaacc ccatcgccga ggcgcggcca tagtccggcg
      121 gataggacag cgtcgaatcc cagatcgcgg tcgtgatgac gtagatacgg ccgggaatgc
      181 cgagcaccag ggcagcggcg aacgagccca gcatctcggc gaagacgaac agcatggcgc
      241 ccagcacgcc cggcatgacc agcggcaaag tgacggtaag cgtggtgcgg agctttgagg
      301 cgcccatcac ccgggcggat tcctcgagcg ccgggtccat cgacttcatc gaggccgaga
      361 tcatgacgaa ggcgacggtg ccctcgaaca gcgccatcac ccaggcgatg ccgaagtggg
      421 tgtagatgtc tacgaggtcg ccgccgccgc ccagcccctt ccagagctgg ttgacgaagc
      481 cgctcttggg gccggcaatg acggcccagg cgagcgcgcc gaccagcggc gtcatgtagt
      541 agggcagctc catcagccgc tcaagcttgt cgcggcccgg cacgttggtg cgcgtcagga
      601 tccaggccag cgtgaagccg atcaggatgg ccatcacggt ggccatcacc gcgatgatca
      661 ccgtgttgat caggacgttg atgtcctcgt cgaagatcgc gaggtagttc ctgatcccgt
      721 aggcctcggg cggaaacaac atcggatcgc cggtattgag cgattcctcg accaggaaca
      781 ccagcggcag gatgacgagg aagcccacgg ccagcaggat gacgacggtg atgatcgcct
      841 gccagttgcg gcgcggccgc agggcctcct cggacagcaa cgtcaagacg gactcagcgc
      901 cgcgcgccga cgatgcggtc ccattccttg gcgaactccg gccggtcctt ctcgaaggca
      961 ttccagtcgg ccgggatgag cagcttcatg tccttgagcg gcacgctgcc ggccggcgcc
     1021 ggcacatcag ggcgcggcga atgcagcagc agcgcgtcgc tcagcgcctg ctggccgatc
     1081 ggcgagagaa accagtccat gaacaactcg gcggcattgg gatgcgggcc gtcggccacg
     1141 atgccgtagg tttccgatac cgtcggcacg ccggtctcgg gaaacacgaa ggcaagcggc
     1201 gcgcccttgg ccttgaactc gatatagccc gaatactgcg cgcccatgat gatcttgtcc
     1261 tggccgtcga ccaggcggcc gtactgctgg acgtaggagt cgaaggcgcg cggcttctgc
     1321 tcgccgaacc ttttgaagta gtccatgccg aggatcggct tcagcatgta ccacacgccg
     1381 tgctgcaggc cggagttcga cactttgacg ttgatcgcgt ccttccactt gggatcgagc
     1441 agatcctccc acttcttggg cgcttcggcg gccgccacgt tgttggggtt gtaggcgatg
     1501 cccgccatga tgactgaacc ccaggtccag aagccttcgg gggtgctctt gtacgccggt
     1561 ttgaaggcgg ccatctccgg cgagatgtat tggcgaaacc caccctgcct ctggaagtcg
     1621 aggatcatgc ccatgtcgga gatctggatg acgtcgacca ggtaggactt ggcctggcgt
     1681 tccgtgcgga ccttggcgta gagcgcgccg gcctgcaggc gcacgtagtt ggtcttgatc
     1741 ttggggaaca tcttgttgaa ggacgccagc agcttggcct ggccctgctc gggatcggtc
     1801 gaatagagca cgaacgcgcc ctcggcctcg gccttgtcga cgtcggcgca ggtcttaaag
     1861 ccctcca
//
LOCUS       DASWGA010000170         1721 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1412841, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000170 DASWGA010000000
VERSION     DASWGA010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412841"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            373..1272
                     /locus_tag="VF991_04160"
     CDS             373..1272
                     /locus_tag="VF991_04160"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEX9555664.1"
                     /translation="MSDPSARLKPTCFQELILTLQDYWAGQGCLILQPFDMEMGAGTF
                     HTATALRALGPKPWYAAYVQPSRRPKDGRYGDNPMRLQHYYQFQAILKPSPTDILERY
                     LGSLEAIGIDTSLHDIRFVEDDWESPTLGAWGLGWEVWCDGSEISQFTYFQQVGGIEV
                     DLVSGEITYGLERLAMYLFDKKSIYDLPFNRTDSAVPLSYGDVFLENEREQSAYNFEV
                     ADTDMLFRHFADAEKECIRLIDRKLPLPAYEQCIKASHVFNLLDARGVISVTERQSYI
                     LRVRELTKACCEAWLATQTAEAA"
     gene            1274..>1721
                     /locus_tag="VF991_04165"
     CDS             1274..>1721
                     /locus_tag="VF991_04165"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEX9555665.1"
                     /translation="MAELLLELLSEEIPARMQTRAAEDLKRLVCDGLKAAGLEFSDAR
                     AFATPRRLALVVDGLPTARADVHEEKRGPRVGAPDQAVQGFLKSAGLASLDQAEKRDT
                     GKGEFWFAVIDKKGGPTAAALPGIVDAAMRALPWPKSMKWGSGTMTW"
BASE COUNT          314 a          534 c          588 g          285 t
ORIGIN      
        1 tggagtgcat cccttgggtg agacagtaaa actgcggaca ggttggtcat cggctcgtgg
       61 gttgcaggcc aggcatggct tgggcggggg cgacgctcct gtctcggctg aatcggcaaa
      121 agggtagcgg aaagtgcgga aacccctgcc gatgccgata cggccgatgt tcgggcagcg
      181 ccggcgctgg cgctgttgga ctagcgggaa gtgcgtaaac ctcctgcgcc ggcgcagccg
      241 gcgccacctg atggcgcggc cgcgatgagc cgggagcgct tgaccaggga ggggcgcgta
      301 cctattttgc tgcaccgcaa aaacggcctt aagtctcgga aagacaaggt ctttaagcct
      361 cggggaatac cggtgtccga cccctcagca cgcctcaagc cgacgtgctt tcaagaactc
      421 atcctgaccc tgcaggacta ttgggcgggc caaggctgcc tgatcctgca gcccttcgac
      481 atggaaatgg gcgccggcac attccacacg gccactgccc tgcgcgcgct ggggccaaag
      541 ccctggtacg ccgcctatgt gcagccctcg cgccggccca aggatgggcg ctacggcgac
      601 aatcccatgc gcctgcagca ctactaccag ttccaggcga tcctgaagcc gtcgccgacc
      661 gacatcctgg agcgctatct cggctcgctc gaggcgatcg gcatcgacac ctcactgcac
      721 gacatccgct tcgtcgagga cgactgggag agcccgacac tcggcgcctg gggcctgggc
      781 tgggaagtgt ggtgcgacgg ctccgagatc agccagttca cctacttcca gcaggtcggc
      841 ggcatcgagg tcgacctggt gtcgggtgag atcacctacg ggctcgaacg gctggcgatg
      901 tacctgttcg acaagaagtc gatctacgat ctgccgttca atcgcactga ttcggcggtg
      961 ccgctcagct acggcgacgt gttcctggag aacgagcgcg agcagtcggc ctataatttc
     1021 gaagtcgcgg acaccgacat gctgttccgc cacttcgccg acgcggagaa ggaatgtatc
     1081 cggctgatcg acaggaagct gccgctgccg gcctacgagc agtgcataaa agcctcgcac
     1141 gtcttcaatc ttttggacgc gcgcggcgtg atcagtgtca ccgagcggca gagctacatc
     1201 ctgcgcgtgc gcgagctgac caaggcgtgc tgcgaggcgt ggctcgccac gcagacggct
     1261 gaggctgcat agcatggcgg agctgcttct cgagcttctg agcgaagaga ttccggcacg
     1321 catgcaaacg cgcgcggccg aggatctcaa gcggctcgtt tgcgacgggc tgaaagctgc
     1381 cgggctcgaa ttctccgatg cgcgcgcctt cgctacgccg cggcggctgg cgctggtggt
     1441 cgacggcttg ccgacggcgc gcgccgacgt ccacgaggag aagcgcgggc cgcgggtcgg
     1501 tgcgccggat caggcggtgc agggcttcct gaaaagcgcc gggctggcct cgctcgacca
     1561 ggcggagaag cgcgacaccg gcaagggcga gttctggttc gccgtcatcg acaagaaggg
     1621 cgggccgacc gccgcggcgc taccaggcat cgtcgatgcg gcgatgaggg cgctgccgtg
     1681 gccgaaatcg atgaaatggg gcagcggcac catgacctgg g
//
LOCUS       DASWGA010000171         2327 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_150892, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000171 DASWGA010000000
VERSION     DASWGA010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150892"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2327)
                     /locus_tag="VF991_04170"
     CDS             complement(<1..>2327)
                     /locus_tag="VF991_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555666.1"
                     /translation="VPFNAIFLISDPMQKWRLFANFVLYFLPFLAGALYLGTVFLKAQ
                     KTFNRVYFADLVGSGLCGLSVLLAMYFYRPDDLIMAPLLLWLIGGVLWFVALGDRRGM
                     AVIVGVAVLSAAVHYVAPGVLGIPKLAVSDYKGVAYARKFPDNQRIYERASPFGYLEV
                     YSSSYLHFAPGQSDNAAFNLPNMPANAYLGLYIDSEGPSGIIKDLPASETAYFKYLSM
                     YYPYLLKEKPDTFVVQFGGGLSTAVALKSGSEHVTVAEGNPAILTAFREDKGLRDFTG
                     DILNNPKVTVIDYDGRLYVAHTKNRYDVIDLSLADSAGLSSPGGFAIVEKYSYTREAM
                     SAYMRALKPGGILSVTLWNKEEPPKSVLKLYATMVAAARDVDGPDIAKDFYVVSSYLS
                     TATVLYKRGGFSAEEIAKLNAHTKAMSFDEIYAPGLKVDESELAQILQDYHDQFFFEG
                     APADPTAPSEKEPNDKPPPGMTGGATVAADGAPQAKDGVPPPPRLPAVLLGRFAWYYL
                     VNGGWQKVADDYVFDTRVLTNHQPYFAAYIKVKDLLKFTDRLELVQDEWGYLLLWATL
                     GIAALFAFTLVLFPLIFGWRTIFSRYPGKFGTMIYFLCLGLGYIIVEVGMIAHFILAL
                     SNAIVSASVLITGMLVFSGIGSFVSERFLDRARSIMPRIFLAIFLILTLYAFTIDYAL
                     DWIGTLPYALRIVLCLLLLLPPAFLMGFPMPTAMTTLGRLGKDHMFLWAWGINGCFSV
                     IGAASVPIVATSFGLPAVVLMGAFSYLVALPAFYSV"
BASE COUNT          483 a          693 c          789 g          362 t
ORIGIN      
        1 acggaataga aggcaggcag cgccaccaga taggagaagg cccccatcag cacgacagcg
       61 ggcaggccga agctggtcgc cacgatcggc accgaagcag cgccgatcac cgagaagcag
      121 ccgttgatgc cccacgccca caggaacatg tgatccttgc ccaggcgacc cagcgtcgtc
      181 atcgccgtcg gcatggggaa gcccatcagg aaggccggcg gcagcagcag cagcaggcag
      241 agcacgatgc gcagcgcata gggcagggtg ccgatccagt ccaacgcgta gtcgatggtg
      301 aaggcataga gcgtcaggat cagaaagatc gccaggaaga ttctcggcat gatcgagcgc
      361 gcgcggtcga ggaagcgctc ggacacgaag ctgccgatgc cggagaacac cagcatgccg
      421 gtgatcagca ccgaggccga cacaatggcg ttgctgagcg ccaggatgaa gtgggcgatc
      481 atgcccacct cgacgatgat gtagcctagc cccaggcaga ggaagtagat catggtgccg
      541 aacttgcccg gatagcggct gaagatggtg cgccagccga agatcagcgg gaacagcacc
      601 agggtgaagg caaacagcgc ggcgatgccc agcgtcgccc acaacagcag ataaccccat
      661 tcgtcctgca ccagctccag ccggtcggtg aatttcagca ggtccttcac cttgatgtag
      721 gcggcgaaat acggctggtg gttagtcagc acgcgagtgt cgaagacgta gtcgtccgct
      781 accttctgcc agccgccatt gacgaggtag taccaggcga agcggccgag caggacggcc
      841 ggcagacgcg gtggcggcgg tacaccatcc tttgcttgcg gcgcgccgtc cgcggcgacg
      901 gtggcgcccc ctgtcatgcc cggcggcggc ttgtcgttgg gttccttctc cgagggcgcc
      961 gtcggatcgg ccggcgcgcc ttcgaagaag aactggtcgt ggtagtcctg gaggatctgc
     1021 gccagctccg attcgtcgac tttcaggccg ggtgcgtaga tctcgtcgaa cgacatcgcc
     1081 ttggtgtggg cgttgagctt ggcgatctcc tcggccgaaa aaccgccgcg cttgtagagc
     1141 acggtcgcgg tcgagaggta ggacgagacg acataaaaat ccttggcgat atccggtcca
     1201 tcgacgtcac gcgccgcggc gaccatggtg gcgtagagct tcagcaccga cttgggcggc
     1261 tcttccttgt tccacagcgt gaccgacagg atgccgccgg gcttcagcgc gcgcatgtag
     1321 gcgctcatgg cctcgcgcgt gtaggaatat ttttcgacga tggcgaagcc gccggggctc
     1381 gacaggccgg ctgaatcggc gagcgacagg tcgatcacgt cgtagcggtt cttggtatgg
     1441 gcgacataga ggcggccgtc gtaatcgatg acggtgacct tggggttgtt caggatgtcg
     1501 ccggtgaaat cgcgcaggcc cttgtcctcg cggaacgccg tcaggatcgc gggattgcct
     1561 tccgcgaccg tgacatgctc agagcccgac ttcagcgcca ccgcggtcga caggccgccg
     1621 ccgaactgca ccacgaacgt gtccggcttc tccttcagga ggtacgggta gtacatcgag
     1681 agatacttga aataggccgt ctcgctggcc ggcaggtcct tgatgatgcc cgacggcccc
     1741 tccgaatcga tgtagaggcc gagataggcg ttggccggca tgttgggcag gttgaacgcg
     1801 gcgttgtccg actggcccgg cgcgaagtgc aggtaggagc tcgaatagac ctcgaggtag
     1861 ccgaacggcg aggcgcgctc gtaaatccgc tggttgtcgg ggaacttgcg ggcgtaggcg
     1921 acgcccttgt agtccgacac cgcgagcttg gggatgccga gcacaccggg tgccacgtag
     1981 tgcacggcgg ccgacagcac ggcgacgccg acgatgaccg ccatgccgcg ccggtcgccc
     2041 aacgccacga accacagcac gccgccgatg agccacagca gcaacggcgc catgatcaga
     2101 tcgtcggggc ggtagaaata catggcgagc aggacggaaa gcccgcacag gcccgagccg
     2161 acgaggtcgg cgaagtagac ccggttaaaa gtcttctgcg ccttcaggaa gaccgtgccg
     2221 agatagagcg cgccggccag gaagggcagg aaatagagca cgaagttggc gaacagccgc
     2281 cacttctgca tcggatcgga aatcaggaag atggcgttga acggcac
//
LOCUS       DASWGA010000172         3757 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_150915, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000172 DASWGA010000000
VERSION     DASWGA010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150915"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1441
                     /locus_tag="VF991_04175"
     CDS             <1..1441
                     /locus_tag="VF991_04175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9555667.1"
                     /translation="IIGAGATSGGSMDASNLLKPSLQSGELRCIGSTTYKEYRNYFEK
                     DRALVRRFQKIDVPEPSIADAVEIMKGLKPVYEKHHHVTYTDDAIKASVELSARYIHD
                     RKLPDKSIDVIDEVGAAQMLRTPDMRKSTIEVTDIEEIVAKIARIPPKSVSKDDTEML
                     RNIDRDLKTVVFGQDRAIGQLAAAIKLARAGLRSPEKPIGSYLLAGPTGVGKTEVTRQ
                     LARLLGLELIRFDMSEYMERHSVSRLIGAPPGYVGFDQGGLLTDQVNQHPHCVILLDE
                     IEKAHPDVFNVLLQVMDYGKLTDHNGRTVDFRNVILCMTTNAGAADIAKPALGFGREA
                     RNDEDDDAINRLFQPEFRNRLDAVIKFANLLPESMGKVVDKFVAELEVQLADRKVFIE
                     LSDGARRWLADKGYDRMFGARPLARVIQEHLKKPLAEEVLFGKLSQGGGTVRVDSEGE
                     GAAAKLVFTFLPPERDALPPASQEPVLAE"
     gene            1438..1620
                     /locus_tag="VF991_04180"
     CDS             1438..1620
                     /locus_tag="VF991_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555668.1"
                     /translation="MKAFRPLWIALRAAVLGTAVFWVALFVIDKVGWQAPLGATEPVV
                     FFVVFFLGVMMVGGKR"
     gene            complement(1634..1903)
                     /locus_tag="VF991_04185"
     CDS             complement(1634..1903)
                     /locus_tag="VF991_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555669.1"
                     /translation="MRTQFAYLIAGLSLAMAQPAFAQSNDAKYCAELVEKYEQYVSEG
                     AEKGASQSPLEVEIAKGKCGSNPASSIPVMEKALKNAKISLPPRG"
     gene            complement(1982..3157)
                     /locus_tag="VF991_04190"
     CDS             complement(1982..3157)
                     /locus_tag="VF991_04190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9555670.1"
                     /translation="MPDDAPTIGLRVVESLSAVDAEQWDACALAPGSAGSPFLSHRFL
                     KALEDSKSVGRRTGWQPQYLLAESDDGSLQGAVPLYVKGHSQGEYVFDHGWAQALERA
                     GGRYYPKLQVAVPFTPVPGPRLFARPGPLADGVRDAMIDMLAKIAGDNRISSVHATFC
                     SEADWKQFGEHGWLLRLGQQYHWHNNGYRCFDDFLAALASRKRKAIRKEREAVRREGL
                     TLRALCGDEIKPRHWDAFFAFYMDTGGRKWGSPYLTRAFFDILGATMADKVVLVMAEA
                     DGRPVGGALNLKGDDTLYGRYWGCLESHAFLHFEACYYQAIDYAITHGLQRVEAGAQG
                     DHKIQRGYMPVPTFSAHWIVDPGFRRAIDDYLKRERPAIEQEIEGLKQYSPFRKENE"
BASE COUNT          664 a         1215 c         1217 g          661 t
ORIGIN      
        1 catcatcggc gccggcgcca cctcgggcgg ctcgatggat gcctcgaacc tgctcaagcc
       61 gtcgctgcag tcgggcgagc tgcgctgcat cggctcgacc acctacaagg aataccgcaa
      121 ctacttcgag aaggaccgcg ccctggtccg ccgcttccag aagatcgacg tgcccgaacc
      181 gtcgatcgcc gacgccgtcg aaatcatgaa ggggttgaag ccggtctacg aaaagcacca
      241 tcacgtcacc tacaccgacg acgccatcaa ggcctcggtc gagctgtcgg cgcgctacat
      301 ccacgatcgc aagctgcccg ataaatcgat cgacgtgatc gacgaggtcg gtgccgccca
      361 gatgctgcgc acgcccgata tgcgcaagtc gaccatcgag gtgaccgaca tcgaggagat
      421 cgtcgccaag atcgcgcgca tcccgcccaa gagcgtgtcc aaggacgaca ccgagatgct
      481 gcgcaacatc gatcgcgacc tcaagacggt ggtgttcggc caggacaggg cgatcggtca
      541 gctggcggcg gcgatcaagc tcgcccgcgc cggcctgcgc tcgccggaga agccgatcgg
      601 ttcctacctg ctggccggcc cgaccggcgt cggcaagacc gaggtgacgc gccagcttgc
      661 ccgcctgctc gggctggagc tgatccgctt cgacatgtcg gaatacatgg aacgccacag
      721 cgtctcgcgc ctgatcggcg cgccgccggg ctatgtcggc ttcgaccagg gcggcctgct
      781 caccgaccag gtcaaccagc acccgcattg cgtgatcctg ctcgacgaga tcgagaaggc
      841 ccatcccgac gtgttcaacg tgctgctgca ggtgatggac tacggcaagc tcaccgacca
      901 caacggccgg accgtcgact tccgcaacgt catcctgtgc atgaccacca atgccggcgc
      961 cgccgacatc gccaagccgg cgctgggctt cggccgcgag gcgcgcaacg acgaggacga
     1021 cgacgcgatc aaccggctgt tccagccgga gttccgcaac cggctcgacg ccgtcatcaa
     1081 attcgccaat ctcctgccgg agagcatggg caaggtggtc gacaagttcg tggccgagct
     1141 cgaggtccag cttgccgacc gcaaggtgtt catcgaactc agcgacggcg cgcgccgctg
     1201 gctggccgac aagggctacg accgcatgtt cggcgcccgc ccgctcgccc gcgtcatcca
     1261 ggagcacctc aagaagccgc tggccgagga agtgctgttc ggcaagctga gccaaggcgg
     1321 cggcacggtg cgggtcgatt cggagggcga gggcgcggcg gccaagctgg tcttcacctt
     1381 cctgccgccc gagcgcgacg ccctgccacc ggccagtcaa gaacccgtgc tggctgagtg
     1441 aaggcattcc ggccgctgtg gattgcgctt cgtgccgcgg tgcttggcac cgcggtcttc
     1501 tgggtggccc tcttcgtcat cgacaaggtc ggctggcagg cgccgctggg cgcgaccgag
     1561 ccggtggtct tcttcgtggt cttctttctc ggcgtgatga tggtgggcgg caagcgctga
     1621 ggatcgccgc gtctcaaccg cgcggcggca aggagatctt ggcgttcttc agcgccttct
     1681 ccatcaccgg tatggacgat gccgggttcg aaccgcactt gcccttggcg atctcgacct
     1741 cgagaggcga ttgcgacgcg cccttttcgg ctccctcgga gacgtattgc tcgtatttct
     1801 cgacgagctc ggcgcaatac ttggcatcat tcgattgcgc aaacgctggc tgggccatgg
     1861 caagcgacag gcccgcgatc agataggcaa attgagttct caagtttggc tccttgcggt
     1921 tggagcgccg gcgcgtgctg cacacaccac gtgccgcgcg acgtagacaa tacgtcgtcg
     1981 actattcgtt ttccttacgg aaaggtgaat actgtttcag gccctcgatc tcctgctcga
     2041 tcgccggccg ttcgcgcttg agatagtcgt cgatggcgcg gcgaaagccg ggatcgacga
     2101 tccaatgcgc cgagaaggtc ggcaccggca tgtagccgcg ctggatcttg tgatcgccct
     2161 gcgcgcccgc ctcgacccgc tgcaggccgt gcgtgatcgc gtagtcgatg gcctggtagt
     2221 agcaggcctc gaaatgcagg aaggcgtggc tctccaggca gccccagtag cggccgtaga
     2281 gcgtatcgtc gcccttgagg ttgagcgcgc cgcccaccgg acggccatcg gcctcggcca
     2341 tcaccagcac caccttgtcg gccatggtgg cgcccaggat gtcgaagaag gcgcgggtga
     2401 gatagggcga gccccatttg cggccgccgg tgtccatgta gaaggcgaag aaggcatccc
     2461 aatgccgggg cttgatctcg tcgccgcaga gcgcgcgcag ggtcagcccc tcgcgtcgca
     2521 ccgcttcgcg ctccttgcgg atcgccttgc gcttgcgtga agcgagtgcc gccaagaaat
     2581 cgtcgaagca gcggtagccg ttgttgtgcc aatgatactg ctggccgagc cgcagcagcc
     2641 agccatgctc gccgaactgc ttccagtcgg cttcgctgca gaaggtggca tggaccgagc
     2701 tgatgcggtt gtcgccggcg atcttggcca gcatgtcgat catggcgtcg cgcacgccgt
     2761 ctgcgagcgg gccgggccgc gcgaacaggc gcggtccggg aaccggcgtg aagggcacgg
     2821 cgacctgcag tttgggatag tagcggccgc cggcgcgctc cagggcctgc gcccagccgt
     2881 ggtcgaacac gtattcaccc tggctgtggc ccttgacgta gagcggcacg gcgccctgca
     2941 ggctgccgtc gtcggattcg gccaaaagat actgcggctg ccagccggtg cgccgtccga
     3001 ccgacttgga atcctccagc gccttcagga agcgatggct gaggaagggg ctgccggccg
     3061 aacccggcgc cagggcgcag gcgtcccatt gctcggcatc gaccgcggaa agcgactcga
     3121 cgacacgcag gccgatggtc ggagcatcat ccggcatggc gagagcatag ctcgaatcgt
     3181 gccaggaatt gcgccaggaa tttggcggca accatttgcc gaaggtgcgc tttgcggtcg
     3241 cgaggacgtg aatgcaaggc atgcgccggc gcaaaaaaag tccggctgac cgaagtcgcc
     3301 ggaccggtag atcagttacg cctttcggcc cccgaaggcg gggcgtcgca ttggccttaa
     3361 tagcttatgt tctcaaggtg gcttccggtg gggccatgag ggcgcccaca cggaagccga
     3421 aaggcgttcg gttagaggga ccaaagttgg actttggtct acgccctttc ctttttactg
     3481 cttcttcttc ttagcagcct tcttcttagc agcctttttc ttagcagcca taactgtctc
     3541 ctatggttag ctttgaggca cccaaccgtg agggccccgg ggtacgcggg tacgcttcgc
     3601 cacgcatgct caactacaac cggtggtgcc gccgcaggtc gtgcatttga ggcacgtccc
     3661 gttgcggacc atggtgaagt tgccgcattc cggacaggca tccccttcga agcccttgag
     3721 cttcgccacg cgggcgaaac caagggcgga ggaggat
//
LOCUS       DASWGA010000173         3200 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2302214, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000173 DASWGA010000000
VERSION     DASWGA010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2302214"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1669
                     /locus_tag="VF991_04195"
     CDS             <1..1669
                     /locus_tag="VF991_04195"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9555671.1"
                     /translation="PRSGRVAEDFAWGRERFLDEARALARFRHPHIVPVLRYFEANGT
                     AYTVMEFEDGKSVAELLREPARRLPPDDVRRLAYGLLAGLGAMHAQDFLHRDIKPSNI
                     MVRRDGVPILIDFGAARQAMGERTRTLTGVLTPQYAPIEQYALDGKQGPWSDIYSAAA
                     VLHHAIAGRPPPDAAARVGMDPYRPLAETEGDRFEPDFLAAIDRALAFAPAERPQSVG
                     DWNALFGTSLRRIDDAPTRRLANRADTTTPRLGGVSREQAEPASVGPPARSTSVGIWI
                     VVIVVAVAAVALWRFQPEIRSLIAGPPVEQAAPPVEKAPTPAVQPPAPQPQATPAPTP
                     VPGTSAPQAIIDQARRAAGEARMALERADEASRTARSMAGEARIVAARAARPDLENAE
                     RLSYEAGASYIGQVANGKRQGLGAANLANGERQVGEWQADHLNGLGTVQLADDTRYAG
                     QWRDGQSSGLGVREKPGVERAEGNFVAGRLEGLGVRRTLAEPNVVQSGEFHDDMLEGP
                     GVESVGDQRYEGGFSAGRRNGYGQVSGADGKVQAGRWVDGKAVETTP"
     gene            1679..2308
                     /locus_tag="VF991_04200"
     CDS             1679..2308
                     /locus_tag="VF991_04200"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing protein"
                     /protein_id="HEX9555672.1"
                     /translation="MVVAADRLQQPAAAVIKTLSVLLIDDNPARAEIVEAGLAAAGYR
                     LLARLEGTQDLIGRVRALEPDVVVVSIDSPGRDTIEDMRRTTDLMPRPIALFVDQSDP
                     ATIAAAMEAGVSAYVVKGLAQDRVRPVVDVAVAHFNRYHAMREKLDRARLSLVERKTV
                     DRAKGLLMEQKALSEEAAYKVLRKLAMDQNKRIGEVAREIVTYAKVLKP"
     gene            2703..>3200
                     /locus_tag="VF991_04205"
     CDS             2703..>3200
                     /locus_tag="VF991_04205"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555673.1"
                     /translation="MADLERAKLKVGFIPIIDCAPIVMADELGAYERQGLEVEIRREV
                     SWANVRDKLALGVLDASHILAPLPLALTLGIDSVSVPMINAMTLEVNGNALTLSQSLW
                     REIEDVAPQFVGRTPLDARAIAAVVAKRAAAGAPPLVLASVFPYSVQNYMLRLWLSSG
                     GLDPDR"
BASE COUNT          509 a         1107 c         1094 g          490 t
ORIGIN      
        1 gccgcgcagc ggccgcgtcg ccgaggattt cgcctggggc cgcgagcgct ttctcgacga
       61 ggcgcgcgcg ctggcgcgtt tccgtcatcc gcacatcgtg ccggtgctgc gctacttcga
      121 ggccaacggc acggcctaca ccgtcatgga gttcgaggac ggcaagagcg tggccgagct
      181 gttgcgcgaa cccgctcggc gcttgccgcc cgatgatgtc cggcgcctgg cctacggctt
      241 gctggctggc ctcggcgcaa tgcatgcgca ggattttctt catcgcgaca tcaagccgtc
      301 caacatcatg gtccggcgcg acggcgttcc catcctcatc gacttcggcg cggcgcgcca
      361 ggcgatgggc gagcgcacgc gcacgctgac cggcgtgctc acgccgcaat atgcgccgat
      421 cgaacaatat gcgctcgacg gcaagcaggg cccgtggagc gatatctact ccgccgcggc
      481 cgtcctccat catgcaatcg ccggacggcc gccacccgat gccgccgccc gcgtcggcat
      541 ggatccctat cggccgctgg ccgagaccga gggcgatcgc ttcgagcccg actttctggc
      601 cgcgatcgat cgcgcgctcg ccttcgcgcc ggccgagcgg ccgcagagcg tcggcgattg
      661 gaacgccttg ttcggcacgt cgttgcgccg gatcgacgat gcgccgacgc ggcgtcttgc
      721 caacagagcc gacaccacga ccccgcgcct gggcggcgtc agccgcgaac aagccgaacc
      781 cgcctcggtt ggccctccgg cacggtcgac cagcgttggc atttggatcg tcgtcatcgt
      841 ggttgccgtc gccgcagtgg cgctttggcg tttccaaccc gagatccgtt ccttgatcgc
      901 aggtccgccg gtcgagcagg cagcaccccc tgtcgaaaaa gcaccgacgc ctgccgtgca
      961 accgccggcg ccgcagccgc aagcgactcc tgcgccgacg ccggtgcccg gcacgtcggc
     1021 gccccaggcg atcatcgacc aggcccgacg tgcggccggc gaggcgcgga tggcgctcga
     1081 gcgtgcggac gaggcatcgc ggaccgcgcg gtcgatggcc ggcgaggcgc gcattgtcgc
     1141 ggcccgggcg gcgcggccgg acctcgagaa cgccgagcgc ctgtcctatg aggccggcgc
     1201 gagttacatc ggccaggtcg ccaacggcaa gcggcaaggt ctcggcgccg ccaacctcgc
     1261 caacggcgag cgccaagtcg gcgaatggca ggccgaccat ttgaatggcc tgggcacggt
     1321 gcagctcgcc gacgacacgc gctacgccgg ccagtggcgc gacggccagt cgagcggcct
     1381 cggcgtgcgc gaaaagccgg gcgtcgaacg cgccgaaggc aatttcgtcg ccggtcgcct
     1441 cgaagggctg ggcgtgcgcc gcaccctcgc cgagccgaac gtggttcaat ccggcgaatt
     1501 ccacgacgac atgctggaag ggccgggcgt cgaatcggtc ggcgaccagc gttacgaagg
     1561 cggcttcagc gccggccgcc gcaacggcta cggccaggtc agcggtgcgg acggcaaggt
     1621 ccaggcgggc cggtgggtcg acggaaaggc tgtagaaaca acgccttgaa ggggtggcat
     1681 ggttgttgcg gccgaccggc tgcaacaacc agccgccgcc gtgatcaaaa cgctttccgt
     1741 cctgctgatc gacgacaacc ccgcccgcgc cgaaatcgtg gaagcggggc tggcggcggc
     1801 cggctatcgc ctgctggcgc ggctggaagg gacgcaagat ctcatcggcc gcgtgcgcgc
     1861 gctcgagccg gatgtcgtcg tcgtcagcat cgacagtccg ggccgcgaca cgatcgagga
     1921 catgcggcgc acgaccgatc tcatgccgcg cccgatcgcg ctgttcgtcg accagtccga
     1981 cccggcgacc atcgccgcgg cgatggaggc gggcgtttcg gcctacgtcg tgaaggggtt
     2041 ggcgcaggac cgggtgcggc cggtggtcga cgtggcggtc gcgcacttca accgctacca
     2101 cgccatgcgc gagaaactgg atcgcgcccg cctgtcgctc gtcgaacgca aaacagtcga
     2161 tcgcgccaaa ggccttttaa tggagcagaa ggccctgagc gaggaagcgg cctacaaggt
     2221 cctgcgcaag ctggcgatgg accagaacaa gcggatcggc gaagtcgcgc gcgagatcgt
     2281 cacctacgcc aaggtgctga agccgtgatc tgtcgtcctg agcgcagcga aggacctcat
     2341 cgccgcttgc caccggcatg agatccttcg ctacgcttca gcgcgggggt tacccgcgcg
     2401 cgatgacaga tgtgcctgcg gaaccgccat gctgcacagg cgagcatcac gtgcggcaag
     2461 cgggcacacg aggcacctgt acacttcgca gacccctgaa ccctttgctt tcaatgggct
     2521 agcccgctcg cgctgcttgg cacgcttcat gctccctctg atcgtgcgaa cccaatggcg
     2581 ggttctctcc tgatttaaga cgcggaccaa ggtcggtccg ccgttggaca acggcgtcct
     2641 cgcgcggtcg gcagccctgc cggccgaacg ggacgctttt tgtttgtgga gtgcgtgcgg
     2701 ccatggccga tttggaacga gcgaaactca aggtcgggtt catcccgatc atcgactgcg
     2761 cgccgatcgt gatggccgac gagctgggcg cctacgagcg ccaggggctg gaggtcgaga
     2821 tccgccgcga agtgtcgtgg gccaacgtgc gcgacaagct ggcgctcggc gtgctcgacg
     2881 cctcgcacat cctggcgccg ctgccgctgg cgctcacgct cggcatcgac agcgtcagcg
     2941 tgccgatgat caacgccatg acgctcgagg tgaacggcaa cgcgctcacc ctctcgcaaa
     3001 gcctgtggcg cgagatcgag gacgtggcgc cgcagttcgt cggtcgcacg ccgctcgatg
     3061 cccgggccat cgccgccgtc gtcgccaagc gcgcggccgc cggcgcgccg cctctcgtgc
     3121 tggcctcggt gtttccctac tcggtgcaga actacatgct gcggctctgg ctgtcgtcgg
     3181 gtggcctcga tccggatcgc
//
LOCUS       DASWGA010000174         2023 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1029036, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000174 DASWGA010000000
VERSION     DASWGA010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1029036"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..1421)
                     /locus_tag="VF991_04210"
     CDS             complement(162..1421)
                     /locus_tag="VF991_04210"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX9555674.1"
                     /translation="MLGAVLGLYIPFPKKVLAGILAFAAGSLIAALAIEFGFEGAHEL
                     VRQGANVRDAWLSIAGGFAVGAVIYYVASLFLDQKGAALRYPSRFLEYALDRKRRAVG
                     EKLALLSKCGLLRHLSAEAIEPLLDRVQEREVRAGEIVFRTGDPGDALYIIAHGVVDV
                     LNDSDHRTLAELGDGQAFGEMALLSEGTRTATIRAKTDTQLLAIGKDDFDGLLAEDPF
                     LDEQVRKLSHERAIANLRNGDVNPALWAQMARESVDRLSRSEEHRLLQEAKQGKGAGL
                     AIVFGNILDTIPGCLVIGAKFAGFESLSLTLILGMFLGGIPEAAASATMLRKAGYSDR
                     TIFLLWATVLAAGVVAAVAGKLLISGAESTTAVLAQAVAGGAILALVTHAMIPEALHK
                     GGSGIVLPTVGGFLLALYLALFEAVTT"
     gene            1420..1638
                     /locus_tag="VF991_04215"
     CDS             1420..1638
                     /locus_tag="VF991_04215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555675.1"
                     /translation="MTELVVAKPSSATDTTSDRENPAIVKGGPPGLSACADRWSTPIK
                     INASASAAIPIRLVAIGIACALAGRSIT"
BASE COUNT          395 a          660 c          643 g          325 t
ORIGIN      
        1 ttcatcgatg gcaatatcct tgatccgccg gccgagcgca tagacgctgg cggcgatcac
       61 acccggctcg ttgcctggtt caggaactct agcgttgggc ctgtccatgg aaccctccgt
      121 cactgggcat caaaataaca gtgctgcaca aggcactgct cctacgttgt caccgcctcg
      181 aacagcgcga gatagagcgc gagcaggaag ccacccacgg tcggcaacac gattccggaa
      241 ccgcccttgt gcagcgcctc ggggatcatg gcgtgggtga ccagcgccag gatggcgccg
      301 cccgccaccg cctgggcgag caccgccgtg gtcgattccg cgccgctgat caggagtttt
      361 ccggccaccg ccgcgacgac gccggccgcc agcacggtcg cccatagcag gaagatcgtg
      421 cggtcggagt agcccgcctt gcgcagcatg gtggcgctgg cggccgcctc gggaatgccg
      481 cccagaaaca tgccgaggat aagagtgagc gacaggcttt cgaagcccgc gaacttggcg
      541 ccgatcacca ggcagcccgg gatggtgtcg aggatgttgc cgaacacgat ggcaagtccg
      601 gcgcctttgc cctgcttggc ctcctgcagc aacctgtgct cctcgctgcg gctcagccgg
      661 tcgacgctct cgcgtgccat ctgcgcccac agtgcgggat tgacgtcgcc gttgcgcagg
      721 ttggcgatgg cacgctcgtg gctgagctta cgcacctgtt cgtcgaggaa cggatcctcg
      781 gccagcagcc cgtcgaaatc gtccttgccg atcgccagga gctgggtgtc ggtcttggca
      841 cgaatggtgg cggtgcgcgt gccctcgctc agcagcgcca tttcgccaaa cgcctgacca
      901 tcgccgagtt ccgcgagcgt gcgatggtcg ctgtcgttca gcacgtcgac gacgccgtgc
      961 gcgataatat agagagcgtc gcccggatcg ccggtccgga acacgatctc gccggccctg
     1021 acctcacgct cctgaacgcg atcgagcagc ggttcgatgg cctcggccga tagatggcgc
     1081 agcaggccgc atttcgacaa cagggcaagc ttttcaccga cagcgcggcg cttgcggtcg
     1141 agggcgtatt ccagaaagcg cgaaggatag cgaagggcgg cgcccttctg gtcgaggaac
     1201 agcgaggcga catagtagat gaccgcgccg acggcaaaac caccggcgat cgacagccag
     1261 gcgtcgcgca cattggcgcc ctgcctgacg agctcgtgcg ctccctcgaa gccgaactcg
     1321 atcgcaaggg cggcgatcag cgagccggcg gcaaaggcca gtatgcccgc caacaccttc
     1381 ttgggaaacg gaatgtaaag tccgagtacc gcgcccagca tgaccgaact ggttgtggcc
     1441 aagccgagca gcgccacgga cacgacgtcg gatagagaga acccagccat cgtcaaagga
     1501 ggtccaccag gcctctcagc gtgcgccgat cgctggagca cgccgataaa gatcaacgcg
     1561 agcgcgagcg cggcaatccc gatccggctc gtcgcgatcg gcatcgcttg cgcccttgcc
     1621 ggacgctcga ttacctaaaa cgatcgacat atagtttcga gaaggaagcg ctccgaccgg
     1681 catagccgcc gcatatgaaa acggcgcatg atcgacaaca ccgattatgg aagcgacgcc
     1741 gtcttatcgg atcgacatgg gcatcgcgca gcgcttctga cggccacgta gcgcatgtcc
     1801 cgatatggcg atccagcaag caacgccaca cgccaccgca gccagtgcgg ccggtcgacc
     1861 cagcccggcc gtgcaggcat ccaggaattt ctccatcggg gtgtgcttca gtcggtgcac
     1921 ggtatgaatg tacgaggaat gccgccgtgg cgaagcaggc gcagggcccg cctagacacc
     1981 tttcggggca attaggcggg ccccttggcc tgtccagggt tag
//
LOCUS       DASWGA010000175         2311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1664116, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000175 DASWGA010000000
VERSION     DASWGA010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664116"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..793
                     /locus_tag="VF991_04220"
     CDS             <1..793
                     /locus_tag="VF991_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HEX9555676.1"
                     /translation="FPLYVEVDEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLA
                     KRTRAKIFQASTSEVYGDPTVHPQVESYRGNVNPLGPRACYDEGKRCAETLFFDYWRQ
                     HRLRIKVARIFNTYGPRMHPHDGRVVSNFIVQALKGEDITIYGDGMQTRAFCYVDDLI
                     EGWLRLMDHTPDDFTGPVNLGNPVEMPIKHLAEKILKLVNGKSKLIFQPLPVDDPMQR
                     CPDITLARQELKWEPKVALDQGLAKTIAYFDGLLRGNQQMSRVGR"
     gene            complement(825..1823)
                     /locus_tag="VF991_04225"
     CDS             complement(825..1823)
                     /locus_tag="VF991_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013417724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX9555677.1"
                     /translation="MTGAGGFIGGHLVRELQQRGHSKIRAVDVKPLAEWYQKTAGVEN
                     QVGDLALLEACRKAAKGAKMIYNLAADMGGMGFIETHKAECMLSVLINTHMLMAAKET
                     GTERFFFSSSACVYNGDKQTRPDVTALKEEDAYPALPEDGYGWEKLFSERMARHFRED
                     YGIASRVARYHNVYGPEGTYDGGREKAPAAICRKVIAAKLSGQHEIEIWGDGEQTRSF
                     MYIDDCIEGTIRLAASDIVEPLNIGSDELVSINRLVDIVEKIAGVKLKRRYKLDAPKG
                     VRGRNSDNTLIKKLMNWAPSIRLEDGMEKTYKWIHDEMASGKDSVVNALPRAVAAQ"
     gene            2097..>2311
                     /locus_tag="VF991_04230"
     CDS             2097..>2311
                     /locus_tag="VF991_04230"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9555678.1"
                     /translation="MLAEITPVILTYNEAANIGRSLERLTWARQVVIVDSGSTDETLS
                     IAGRYANVRTVYRPFDTHARQWRFAVE"
BASE COUNT          398 a          762 c          724 g          427 t
ORIGIN      
        1 gttcccgctc tatgtcgagg tcgacgagat ctacaatctc gcctgcccgg cgtcgccgat
       61 ccactaccag cacgatccgg tgcagaccac caagaccagc gtgcacggcg ccatcaacat
      121 gctggggctg gccaagcgca cccgcgccaa gatcttccag gcctcgacca gcgaggttta
      181 tggcgacccg acggtgcatc cgcaggtcga gagctatcgc ggcaacgtca atccgctggg
      241 cccgcgcgcc tgctacgacg agggcaagcg ctgtgccgag accttgttct tcgactactg
      301 gcgccagcac cggctgcgca tcaaggtggc ccgcatcttc aacacctacg ggccgcgcat
      361 gcatccccac gacggccgcg tggtgtcaaa cttcatcgtc caggcgctga agggcgagga
      421 tatcacgatc tacggcgacg gcatgcagac ccgcgccttc tgctacgtcg acgacctgat
      481 cgagggctgg ctgcgcctga tggaccatac gccggacgac ttcaccggcc cggtcaatct
      541 cggcaacccg gtcgagatgc cgatcaagca tctcgccgag aagatcttga agctggtcaa
      601 cggcaagtcc aagctgatct tccagccctt gccggtcgac gatcccatgc agcgctgtcc
      661 ggacatcacg ctcgcccgcc aggaactgaa atgggagccg aaggtcgccc tcgaccaggg
      721 gctggccaag accatcgcct atttcgacgg tctcctgcgc ggcaaccagc agatgagccg
      781 cgtcgggagg taggacgctg agggcgcgcc actgcgcgcg gatgttactg cgccgcgacc
      841 gcgcgcggca gggcgttgac gaccgagtcc ttgcccgagg ccatctcgtc gtggatccac
      901 ttataagtct tctccatacc gtcctcgaga cggatggagg gcgcccagtt catcagcttc
      961 ttgatcaggg tgttgtcgct gttgcggccg cgcacgccct tgggcgcgtc gagcttgtag
     1021 cggcgcttga gcttcacgcc ggcgatcttc tcgacgatgt cgactaggcg gttgatgctg
     1081 accagctcgt cgctgccgat gttcagcggc tcgacgatgt cgctcgcggc cagccggatc
     1141 gtgccctcga tgcagtcgtc gatatacatg aacgaccggg tctgctcgcc gtcgccccag
     1201 atctcgatct cgtgctggcc tgaaagcttg gcggcgatga ccttgcggca gatcgcggcc
     1261 ggcgccttct cacggccgcc gtcataggtc ccttccggac catagacatt gtgatagcgg
     1321 gcgacgcggc tggcgatgcc gtaatcctcg cggaagtggc gggccatgcg ctcgctgaag
     1381 agcttctccc agccatagcc gtcttccggc agcgccggat aggcgtcttc ttccttgagc
     1441 gccgtgacgt cggggcgggt ctgcttgtcg ccgttgtaga cgcaggccga cgacgagaag
     1501 aaaaagcgct cggtgccggt ttccttggca gccatcagca tgtgggtgtt gatcagcacc
     1561 gacagcatgc actcggcctt gtgggtctcg atgaagccca tgccacccat gtcggcggcg
     1621 aggttgtaga tcatcttggc gcccttggcg gccttgcggc aggcctcgag cagggcgagg
     1681 tcgccgacct ggttctccac gccggcggtc ttctggtacc actcggcgag cggcttcacg
     1741 tcgacggcgc ggattttgct gtggccgcgc tgctgcaact cgcgcaccaa atggccgccg
     1801 atgaagccac cggcgccggt cacgaccaca agatcattct tcgacataga cgggcctttc
     1861 caaccgagag agggctttta tcagattttt caaagacttg cgaggttggg ccaggaggcc
     1921 tcgccggcgg ccgcgccgcc gatccggcag ggcgcgccgg gctgctcgtt tgctcgaccg
     1981 gcgctttgcc gtcaagtccg caggccgctg cggaaagtcg cgccaaatct ggtggttcgc
     2041 gcgaaaaaac tcacttatag caatcgccta ggcccctttt tgagcgccca agcgtcgtgc
     2101 tggccgagat cacccccgtc atcctgacct acaacgaagc agcaaacatc gggcggtcgc
     2161 tcgagcgcct gacctgggcg cggcaggtcg tgatcgtcga cagcggctcg accgacgaga
     2221 cgctgtcgat cgccggacgg tacgccaatg tccgcacggt ctatcggccg ttcgatacgc
     2281 atgcccggca atggcgcttc gcggtcgagg a
//
LOCUS       DASWGA010000176         1524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1795634, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000176 DASWGA010000000
VERSION     DASWGA010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1795634"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..>1524)
                     /locus_tag="VF991_04235"
     CDS             complement(165..>1524)
                     /locus_tag="VF991_04235"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEX9555679.1"
                     /translation="SGLYHILSVSGLHIVFVVGLVMGLVRYGIALVPPLALRVDAKKV
                     AAVLALAAALFYTALAGAPVPAQRACAMAGFALIAVLLDRTALSLRLVAWSAIIVLIA
                     APESLTGASFQMSFAAVIALIAAWEAGAGWRRRLHERAELSTHRWLWRLGAGLGASLA
                     TTLVASIATGAFAAYHFNRLSLLGVVANLLGVPLTGFWIMPWGLLAMLLMPLGLERFA
                     LVPMGWGVEGLDAIAYRVAAWPQAATLVPSLPGASLWLLTVGGLWLCLWRRRWRFAGL
                     PVVVVGLLLPPPPTPDLLMSEDGRVLGLRDERGVVHVASARTDRFVADAWARRSGQEG
                     AKRWTVSADEQAAGLGCSTGLCRWRKGPWRVALVSDERRLAEACGGADIVLSTVDAQG
                     RCRGPRLVIDRRDAWRDGAQALWLDELGMRRETANARRGDRPWVPNSSARQAAPVKAP
                     GA"
BASE COUNT          260 a          568 c          536 g          160 t
ORIGIN      
        1 atgtgcccga gtgccgctgg ctggtcggcc cgatcctctc gaaatttgcc ggtcttcccc
       61 tctgcaacga ccccacgggc gtagaccgca gcctcgtgca caagcaggtg gcgcccgacg
      121 tcgttgcctt cttcgacaag actctcgcaa gggcggacta ggtcttacgc gccgggcgcc
      181 ttgaccggcg cggcctgccg cgccgaactg ttgggcaccc acggccgatc gccgcggcgg
      241 gcgttggcgg tctcgcggcg catgccgagc tcgtcgagcc acagggcctg ggcgccgtcg
      301 cgccaggcat cgcgccggtc gatcaccagc cgcgggccgc ggcaacggcc ctgcgcatcg
      361 acggtagaga gcacgatgtc ggcgccgccg caggcttcgg ccagccttcg ctcgtcgctc
      421 accagggcga cgcgccacgg tcccttgcgc cagcggcaga gcccggtgct gcaccccagg
      481 ccggccgcct gctcgtcggc gctgacggtc cagcgcttgg cgccctcctg gccgctgcgc
      541 cgcgcccagg cgtcggcgac aaagcggtcg gtgcgggcgg acgcgacatg gaccacgccc
      601 cgctcgtcgc gcaggccgag cacgcggcca tcctcgctca tcaagagatc gggcgtcggc
      661 ggcggcggca gcaacaggcc cacgaccacg accggcagtc ccgcaaaccg ccagcgccgc
      721 cgccacaggc agagccacag gccgcccact gtcagcagcc acaggctggc gccgggcagc
      781 gacggcacca gggtggcggc ctggggccac gcggcgacgc ggtaggcgat ggcgtcgagg
      841 ccctcgaccc cccagcccat cggcaccagg gcaaagcgct cgagcccgag cggcatcagc
      901 aacatggcca aaagacccca cggcatgatc cagaatccgg tgagcggcac gcccaacaga
      961 ttggcgacga cgccgagcag cgagagccgg ttgaaatggt aggcggcgaa ggcgccggtc
     1021 gcgatcgagg cgaccagggt cgtggcgagg ctggcgccca ggccggcgcc gagccgccac
     1081 aaccagcgat gggtcgagag ctcggcccgt tcatgcaggc gccggcgcca gcccgcgccc
     1141 gcctcccagg cggcgatcag ggcgatcacc gcagcgaagg acatctggaa ggaagcgccg
     1201 gtcagcgatt cgggcgcggc gatgagcacg atgatcgccg accaggcgac caaccgcagc
     1261 gatagcgcgg tacgatcgag cagcacggcg atcaacgcga agcccgccat ggcgcaggcg
     1321 cgttgcgccg gcaccggcgc gccggccaac gcggtgtaga agagcgccgc ggcaagcgcc
     1381 agcacggcgg caaccttctt ggcgtcgacg cgcagcgcca gcggcggcac cagcgcgatg
     1441 ccgtagcgca ccaggcccat caccagcccg accacgaaca cgatgtgcag cccggacacc
     1501 gacaggatgt ggtagagccc cgaa
//
LOCUS       DASWGA010000177        16311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_402273, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000177 DASWGA010000000
VERSION     DASWGA010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 16311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16311
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402273"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="VF991_04240"
     CDS             complement(<1..503)
                     /locus_tag="VF991_04240"
                     /inference="COORDINATES: protein motif:HMM:NF019570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1688 family protein"
                     /protein_id="HEX9555680.1"
                     /translation="MTESVAYLRTPAAIRERAEKMLTYVEDGRSAWFALDADGLEAAV
                     QATLKVARQRFSDPSKIPFHSRWRHFEAGGHDRWSALATRLKGLPKEEAARRRMDLAV
                     VSVLLDAGAGADWSYREPETGDIYTRSEGLAVASFHMFKNGVFSLDAKGDPLCVDAER
                     LATLTPM"
     gene            complement(579..1814)
                     /locus_tag="VF991_04245"
     CDS             complement(579..1814)
                     /locus_tag="VF991_04245"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: protein motif:HMM:NF005536.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEX9555681.1"
                     /translation="MAHIRLNTHPSQGGQAAPPVIWGARDPKLRGPVVGTVGDPAKRN
                     AIGVHSGSYGIYRALAIAAQELKPGHRPDFTNTSPAEPIGPFESWFDPKKIVSLDPWG
                     HMVAEVFADKLLAGWDIRPTIAVTKAHVHMPEIRDAIAAGRLKPDNDLLMPSGDVKVT
                     KAAIEPVWWLPGIAERFGVRETDLRRTLFEHTGGMYTELVTRSDLELFLPPIGGATIY
                     FFGDLGKLGKPETKIACRLHDECNGSDVFGSDICTCRPYLAHGIEICIEMAQKGGVGV
                     VIYNRKEGRALGEVTKFLVYNARKRQPGGDSAAQYFNRTECVAGVQDMRFQELMPDLL
                     HWLGIARIDRFASMSNMKSDALREQGIDVVEQVAIPDELIPADAQVEMDAKKAAGYFS
                     STKPGTTDLVTPKGRGLDE"
     gene            complement(1918..2109)
                     /locus_tag="VF991_04250"
     CDS             complement(1918..2109)
                     /locus_tag="VF991_04250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEX9555682.1"
                     /translation="MRKMLNIGRATLEALELLAADRKVSLQDLVDEALDDLLKKHHRP
                     VTTKDMFAESLKAGRPKRK"
     gene            complement(2688..4289)
                     /locus_tag="VF991_04255"
                     /pseudo
     CDS             complement(2688..4289)
                     /locus_tag="VF991_04255"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
     gene            complement(4412..5443)
                     /locus_tag="VF991_04260"
     CDS             complement(4412..5443)
                     /locus_tag="VF991_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IB"
                     /protein_id="HEX9555683.1"
                     /translation="MAQRTLVARLAEEKGLFIVALEALTVRRRRCGKGFAFMTASGAL
                     LRDAGKIAWLKSLAVPPAYVNVRYAADEAAHLQAIGEDAAGRLQYRYHPKWAEVREAL
                     KARQLSRLAKALPAIRRAVGRGLASAEADRRFAAAAVIELVCLTAIRAGGEEYARERG
                     TRGATTLLKSNVRLADNGGVTLSFKAKGGKTITKTVRSRRFHAALARLLELPGRRMFQ
                     YREPSGEVRSVRASEVNAVLREVAGRRISLKDFRTLVASTSALQALAATVPAESAAKR
                     RRQVREAVVDIAHELANTPTVCRTSYVHDAVITAFEAGALKRVAAKKAKSPVAQAELL
                     ARIVTKHAG"
     gene            5917..6840
                     /locus_tag="VF991_04265"
     CDS             5917..6840
                     /locus_tag="VF991_04265"
                     /inference="COORDINATES: protein motif:HMM:NF018684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HEX9555684.1"
                     /translation="MRCLVFLACLVAAACGVEAASFDCAKAATAVEKAICADPGLSQA
                     DERMAEAYRQAMAASLAPRTLRTDQIRWLAGRDSGNTLDGLRESYDRRIALLGEEAGK
                     WQSVRRDVSEAAARLTCVVPPDPPDGPCTVDAFGYVAGSGDDLAFQLQSYRTGQFRAG
                     GGVVVFRRHGTTLSPVVATAVDGVHFNPPSVVQSPAGSLLDVSGTMEGTGAFNAGSLY
                     LADGEKLSEIDSESWLDDLAKRLPKGWGAWKGIFPDYRTLTASTPLWKSSDGNCCPTA
                     GRATLKLGIQDHRLVILDLHIRNGEAAAQGN"
     gene            complement(6845..8359)
                     /locus_tag="VF991_04270"
     CDS             complement(6845..8359)
                     /locus_tag="VF991_04270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555685.1"
                     /translation="MNVLLVVVSVTLCTAVAEFLVRWLDAADDSGPATRHLEEIARAP
                     GVERDWFFADPPTLPNLRPVPEEWRALVRKVEQSGITEGTRRADMFKAWNAEFVGDPC
                     QHVYLCGAPGHLFVYDPPPGEKRPPYRFLPNTTTPLRLTTNDYGFRGPPVPFQRQPRT
                     VRIAFIGASTTVGSHFQPYSYPEFIGHWLNLWAETRKLDLKFEVLNAGRESITSTDNV
                     VIVREEVLPLQPDLLVYYEGANQFDLSTVATGLPNRPTGLSLSPEASCPARPPPAAVE
                     GDKSGPGWLASLGQALGNEFALVRRVQALFAARNLPGDGGEWPKDDYKLVWPTGVDER
                     DPDIGRPDLPIKLSTIVRDLDAIRSATEQSGAELVLASFFWLVKDGMVLDPIRHRAIL
                     EYLNQGYAPFRYHDMERLAAFENRVFAKYASAHKLAFIDIARLMPFDPDLYVDAIHNT
                     YAGERLRAWVFFQHLLPIVEGRLKSGTWPRKVKPSNAQPPTFTARPITFDCKRR"
     gene            8461..8694
                     /locus_tag="VF991_04275"
     CDS             8461..8694
                     /locus_tag="VF991_04275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555686.1"
                     /translation="MAKGSGPGKRVVVTPRMLRAGALALATLGDVSDYEVVGTVYRAM
                     AAVAPQQTKSAEHVPPANFLEVMRLMRSGRRDV"
     gene            8866..9930
                     /locus_tag="VF991_04280"
     CDS             8866..9930
                     /locus_tag="VF991_04280"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9555687.1"
                     /translation="MQFGWLTLALSPSPAEDQARIEQLIEQACAAERLGFSDVWLTEH
                     YFTGESVYNDSLMFAAALAMKTEKVRIGFAVVQTPFHHPVRLAVQLALLDNLSKGRID
                     VGIGKGTVYNEYEFVGHGLRSHDSRERMEETIDILERAWRESPLTYEGKFHKIHIPAI
                     RPKPVQQPGPPLWRSVISPGSFRECGKLGVPILTARLPVERIKERWATYAAGIDEGRH
                     DEKTKARLLAQSALWRNVYVADSDAQAEDELAGLLADTRAHMMHVREAYNPHDFQPDP
                     ATLNAWTDPKVPDSEAIPFALKTGSLYGTAARVREQVAELRDVGVKHLLCQTGFGAMS
                     HVRNMASMRRFGERVMPAFG"
     gene            complement(9937..10638)
                     /locus_tag="VF991_04285"
     CDS             complement(9937..10638)
                     /locus_tag="VF991_04285"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HEX9555688.1"
                     /translation="MRLARLVASLVVSGLALLLAGIFLSLTPVRAATNPYDNAAYRYT
                     DKPAPVAATTAGHTLTVYVDQDFTRDERERIGLGLRQWNHVLNGLVRFRVSLLPEDPS
                     EQTLTQLRRSGAWIVAKVDSRHPAARERTALAMTVGGGRLGSRGGGFVYVIGDRFAMR
                     DLTAVMLHELGHVLGAGHDPHGHLMAPVYDRNNGHCIDRGAVAMVASAQHLPLEQLNW
                     CVGPGLDDGRYTSRR"
     gene            complement(10720..11160)
                     /locus_tag="VF991_04290"
     CDS             complement(10720..11160)
                     /locus_tag="VF991_04290"
                     /inference="COORDINATES: protein motif:HMM:NF023696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3617 family protein"
                     /protein_id="HEX9555689.1"
                     /translation="MKSFVWMVAVSLSLAALPAQAQTAIQPGLWEVTDKTTMEGVQAM
                     PSSSKRVCVKGGEAILERLLYPSPEDFAKHGCTFTPGAKQAGIFKATTVCPATDQTPG
                     VTANAEVSYKSDSYQGLGQLVVKDKAGTTAKGSSVLSGKRVGDC"
     gene            complement(11263..11628)
                     /locus_tag="VF991_04295"
     CDS             complement(11263..11628)
                     /locus_tag="VF991_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX9555690.1"
                     /translation="MADATKITSGTLIAAEKVEGTDVYNMQGEKLGTVDDIMIDKVSG
                     KAIYAVMSFGGFLGIGEKYHPLPWSTLKYDESKGGYVVNLDKKMLENAPSYDMDEDFL
                     WTPDYGRRVDKYYNAPTYW"
     gene            12230..13030
                     /locus_tag="VF991_04300"
     CDS             12230..13030
                     /locus_tag="VF991_04300"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9555691.1"
                     /translation="MTVEREQSVVLPLSAVPAVPYPAKAELIRVLLVEDDQSFREVLA
                     DELSEHGFSVQSFAEGASLLAAIDAALDADIIVLDWSLPKTSGIDLLPQLRRLGVSLP
                     IVFLTGRALTEYESLAFDRGAIDFIDKARGVDVLVKRLRRAVDAAKPAAHRPADKSVV
                     CGRLVLRPSVSRAYWDQADVGLTLGEYNIVQLLASNAGRYVTYRAIYDRLHYEGFIAG
                     SGEHGYRANVRSAIKRIRNKFRECDPAFVEIENYTAFGYCWGKPGGIG"
     gene            13215..14357
                     /locus_tag="VF991_04305"
     CDS             13215..14357
                     /locus_tag="VF991_04305"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX9555692.1"
                     /translation="MTDRTRTAGRSAQLAGFSAETGGTTPRPALPAPAPTPESVAAPT
                     PSVAMLEPPGFELARASEGAQGWLLTAGYWETPEMRLAAFACLSLVALAILVVVSILR
                     SLRRFREAADEIVFGRVGDEALTARNGVRELSGVARLLDSLVFDLRYMSDQVRLTAEE
                     NAHSLRTPLATMRTALGAIQRSLPPDEPRAQRALKIIDISLNRLSNVVNSAQRNDTTM
                     ADLVAAPRDPVDLAELTRDVLGEAGGRAQARNILFREKLQDAVIVHANCPALKTALLD
                     VLTSAVNASPRYGEISVTLEAGHTDARLTVEDRGCDGDAPELFFQHDFAPSSQANPPA
                     PDQARPVRLGLWNVKRIVEAFGGQVTADHNHHGGVSVSIMLPCDQR"
     gene            14426..14800
                     /locus_tag="VF991_04310"
     CDS             14426..14800
                     /locus_tag="VF991_04310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555693.1"
                     /translation="MWLHWIYLGVIWGALTVVALSLWLRLLGALSLPFCWTVWTILGQ
                     ASGAYVGPKTWAVLLIAAAASVLAARRGPQRDELASGPPLDPLHARLLWCRPQGWAAG
                     SFVGGRLVSGARDLRLLPTQPA"
     gene            14851..15249
                     /locus_tag="VF991_04315"
     CDS             14851..15249
                     /locus_tag="VF991_04315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9555694.1"
                     /translation="MSMLAEKETTYPLEGRKILIVEDEGPIALNLASAVAQAGGIVIG
                     PTPSVAGSFALMAEHTLDGALLDIRLRGETSFALADVLAVLGIPFVFVSGLSSALMPY
                     PHRDRPLFDKPYEAANVIATLARLVKAAAA"
     gene            15617..15811
                     /locus_tag="VF991_04320"
     CDS             15617..15811
                     /locus_tag="VF991_04320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555695.1"
                     /translation="MQRLRFEMLGLIEDRAKGICLTERGRKLASEPIPASPPTQAARD
                     RSGPRDKRGRRLGHQRHTPF"
     gene            complement(15873..>16311)
                     /locus_tag="VF991_04325"
     CDS             complement(15873..>16311)
                     /locus_tag="VF991_04325"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEX9555696.1"
                     /translation="TFKALLAELLASLRGHGVRRIVILNTGVSTEKPIDEVAAGADDV
                     LVLHMRGLGAAADTLLDVPEGGHADERETSVMLALEPRSVRLDRLALDGPFERTGATG
                     DPRAATAFKGERILAARVEDMVATLRKRWPDLAVTSPIRHSAS"
BASE COUNT         2681 a         5341 c         5329 g         2960 t
ORIGIN      
        1 tccatcggcg tcaacgtcgc cagcctttcg gcatcgacgc acagcggatc gcccttggca
       61 tcgaggctga acacaccgtt cttgaacatg tggaagcttg cgacagccaa gccttcagag
      121 cgggtataga tgtcgcctgt ctcaggttcg cggtaggacc agtccgcgcc tgctccggcg
      181 tcgagcagca ccgaaacgac agcaagatcc atgcggcgac gcgcggcttc ttccttcggc
      241 aatcccttca gccgcgtcgc caatgcgctc cagcggtcgt gtccgcccgc ctcgaaatgg
      301 cgccagcgcg agtggaaggg aattttcgaa ggatcgctga atcgctgccg agcgaccttg
      361 agcgtcgcct gcactgcagc ctcgagaccg tcggcatcta gcgcgaacca cgccgagcgc
      421 ccgtcttcga cataggtcag catcttctcc gcccgctcgc ggatcgccgc gggcgtgcgg
      481 agataggcga ccgattctgt catcccgagg cgcacccgaa ggatctcatc ggcggtcgat
      541 gagatccttc gcttcgctca ggatgacaag gaagccgctc actcatcgag cccccgcccc
      601 ttgggcgtca cgagatcggt cgtcccaggc ttggtcgaac tgaagtagcc ggcggccttc
      661 ttggcatcca tctcgacctg ggcgtcggcg gggatcagtt cgtccgggat cgccacctgc
      721 tcgaccacgt cgatgccctg ctcgcgcaag gcgtcggact tcatgttgct catcgaggcg
      781 aagcggtcga tgcgggcgat gcccagccag tgcagcaggt cgggcatcag ttcctggaag
      841 cgcatgtcct gcacgccggc cacgcattcg gtgcggttga agtactgcgc cgccgaatcg
      901 ccgccaggct ggcgcttgcg cgcattgtag accaggaatt tcgtcacctc gcccagcgct
      961 cggccttcct tgcgattgta gatgacgacg cccaccccac ccttctgcgc catctcgatg
     1021 caaatctcga tgccgtgcgc caggtagggt cggcaggtgc agatgtcgga gccgaacacg
     1081 tccgagccgt tgcactcgtc atggaggcgg caggcgattt tggtctcggg cttgccgagc
     1141 ttgccgagat caccgaagaa atagatcgtg gcgccgccga tcggcggcag gaagagttcg
     1201 agatcggagc gcgtcaccag ctcggtgtac atgccgccgg tgtgctcgaa gagcgtgcgg
     1261 cgcaaatccg tttccctgac gccgaaacgc tcggcgatgc cgggcagcca ccacaccggc
     1321 tcgatcgcgg ccttggtcac cttgacgtcg ccgctcggca tcaggaggtc gttgtcgggc
     1381 ttgagccgcc ccgctgcgat ggcgtccctg atctcgggca tgtgaacatg cgccttggtg
     1441 acggcgatgg tcgggcggat gtcccagccg gcgaggagct tgtcggcaaa cacctcggcc
     1501 accatgtggc cccacggatc gagcgacacg atcttcttgg gatcgaacca gctttcgaac
     1561 gggccgatcg gctcggctgg cgaggtgttg gtgaagtcgg gccgatggcc gggcttcagc
     1621 tcctgggcgg caatggcaag cgcgcggtag atgccgtagc tgccggaatg cacgccgatc
     1681 gcgttgcgct tggcgggatc gccaacggtg cccacaacgg ggcccctgag cttgggatcg
     1741 cgcgcacccc agatcaccgg gggagccgcc tggccgccct ggctgggatg ggtattcagt
     1801 ctgatgtgag ccatgtgctt tccagatgcc cgaatcggcg ggaaagcgag gcattttaag
     1861 gcctgcggac taagaaagaa agacacgtaa aaagccgatt ccaggcctga ttcacgctca
     1921 cttgcgcttc ggccggccgg ctttgaggct ttcggcgaac atgtccttgg tcgtcaccgg
     1981 ccggtgatgc ttcttcagga ggtcatccag cgcctcgtcc acgaggtcct gcaggctcac
     2041 cttgcggtca gcggccagca actccagcgc ctcgagcgtg gccctgccga tattcagcat
     2101 cttgcgcata gagccctcat ccccgcatca acgcggcgcg gcgagagagg ctgccgacgg
     2161 ccgaacgact aggccttctt ctttttggcc gccttcttct tggcgacctt cttcttggct
     2221 acctttttct tggccacctt tttctttgcg gctttctttt tcgcggcctt cttcttggcg
     2281 acgcccgtct tcgctgccgc cttcttcgca gccggcgcct tgccggccgc tttggcctgg
     2341 gacttcgccg ctttcagctt cttctcggcg tcggtgaagc cgtagatcac cacctgaccg
     2401 ggcttcggca tcagcggtgt caagggtccg ccgttggacg accagaactc gcgctcgcgc
     2461 atggccagcc ggcccttgtc gaagtagcgg tcctgccagt tggggtagag cttgttggga
     2521 tcaaaatcga tctcgaagaa atccgccacc ttcacgtcct tggcggtcga agccttggcc
     2581 cctttcttga cccagtcttg cgcggcattg cgctgggcgt tgcgctgatt gtaccagcgc
     2641 cagcgatagt gctcgaacac gtcggccacg tgcgtggcat aggcctcggc gatggcgcgg
     2701 ttgccgcgga tcatcaccag gttctcgtcg ttgttgtagg aagccttgtt gccgagattg
     2761 tggctgcccg tcactaccag gcagtcgtcc gagaacggat cgaccaccat caccttgtca
     2821 tgcacgatgg cgtggccggc cttgaagatc tccttctgcc aatggtcggt cttggccagc
     2881 acgccggcgg ggccgacgat ctcggcatcc atgtcctgcc ggcgattggc ctcgaactcc
     2941 atcgccgcct ggtcgtcgct gatgacgccg cgcacgaaca gccagggctt cttcttgcaa
     3001 acgtccgaca ggtatttggg gatggtccag gacctgaggt tgttggcctg gcccggcatg
     3061 aaagccagca ccaggacggc ctgcttggcg ttgtcgatgg cgtccttgag gtccttcatg
     3121 tcgggcggtg tcggcacgac cggcgctttg tccttggtcg gaatcaggcc ggaggtattg
     3181 ggcgagaacc acaccttgat gttcgtcttg ttgtcggcca gcgtgatcgg ctgggcgggc
     3241 gcggcatcgt gggcacgcaa cgccttgccc tgcagcgctc ccaccgcctt gggctgggcg
     3301 ggaatgccgg cggcgacggt gtcggccttg agcttgtccc agtagtcgcg ataccagccg
     3361 gcgacggtcg ggtcgcggat gacgatcgca ttgttgttct gggtacacag cccggattgc
     3421 gtccagttgg tgctgccggt cagcaccgac agcggcttgc cgccctcgct gtagaccatg
     3481 aacttgttgt ggccgatgct gcgaccatcg ggcaggtaac gcgaaatcag ctcggcgtcc
     3541 gagccggcga gttcgtcgcg cgccggcttg ttggccccgt cgtagccgcc cgtcttgtcg
     3601 cccgaattgt tcgacagcac gatgtgcagc cggctcttgg ccgccagcag ccgatcgatc
     3661 agcaccttgt cggtcagctc gtacagcgcg gcgtgacagg tgctgtcgtt cgccggcccg
     3721 gcagccagcc gatcgagctg gctcagcacg cccttgggca gctcgccggc gagcttcgcg
     3781 cgggcctggc cgttgggatc gtccaacgcc ttgttcaacg ccggcaggtt ggcgccgcca
     3841 tactggtcga gcagcctggc gagcgcctgg gtcgagagaa tgccgcggtt gaaatagacg
     3901 tcgatcgggc cgttggcgcc ggtgagcttc tcggtcgccg tcaccgggtc ggtcacgatc
     3961 ggcgtgaggc cgggcaacgg cgcgtagccg ccatccttcg ccgccatcgc cgtaatgcgg
     4021 tagcgcactg caatgtcgcg agacgtggca tcgaggaagt cgcgccagcg gaacccttcc
     4081 accggattgg tcttggtcga tttgttgacg acgttgggat ccttgcggtc ctcgaactcg
     4141 agcagcgagg tcagcgtcgt ccaggccgca cttccgtcgg cgggctggcg ttcgacgagg
     4201 aagcccgcgc atcccgccac cggctgatcg aagctccagg cgatgtgcac cacatcattg
     4261 ttggcgatga cctttgccat ggttgccatc ggccgccccc gctggtttgc gtccgtcgat
     4321 agaatagacc gctgattatt acaatcaagc ctgcgcgcgc gcaggccctc gccaccggcg
     4381 cggtccgccg catagacggc cggccctggt ctcagcctgc gtgcttggtg acgatgcgtg
     4441 ccagcagttc ggcctgcgcc accggcgact tcgccttttt tgccgcaacg cgcttcaggg
     4501 cgccggcctc gaaggcagtt atcacggcat cgtgcacgta cgaggtgcgg cagacggtcg
     4561 gcgtgttggc gagctcgtgg gcgatatcga ccaccgcttc gcgcacctgc cggcgccgct
     4621 tggccgcgct ctcggccggc accgttgccg ccaaggcctg cagcgcgctc gtcgaggcga
     4681 ccagcgtgcg gaaatccttc aaggaaatgc gccggcccgc gacctcgcgc aggacggcgt
     4741 tgacctcgct ggcgcggacc gagcggacct cgcccgaggg ctcgcgatac tggaacatgc
     4801 gccggccggg aagctcgagc aggcgcgcca gggcggcgtg gaagcgccgg ctcctcaccg
     4861 tcttggtgat ggtcttgccg cccttggcct tgaaggaaag cgtgacgccg ccgttgtctg
     4921 ccaaccgcac gttggattta agcagcgtcg tggcgccgcg cgtgccgcgc tcgcgggcat
     4981 attcctcgcc gccggcacgg atggcggtga ggcacaccag ctcaatcacc gcggcggcgg
     5041 caaagcggcg gtcggcttcg gcggaagcca gcccccgccc gacggcgcgg cggatggcgg
     5101 gcaaggcttt ggcgaggcgg ctcagttggc gtgccttcag tgcttcgcgc acctcggccc
     5161 atttgggatg ataacgatac tgcaagcgac ccgccgcatc ttcgccgatc gcctgcaaat
     5221 gcgcggcctc gtcggcggca tagcggacat tcacgtaggc cggcggcacg gccagcgact
     5281 tcaaccaggc gattttgccg gcatcccgca gcaaggcgcc cgacgccgtc atgaaggcga
     5341 aacccttgcc gcagcgccgg cggcgcacgg tgagcgcctc gagtgcgaca atgaacaggc
     5401 ccttttcctc agccagcctt gcaacgaggg tccgctgtgc catggcggaa aaaacgctcg
     5461 acttatcgag gtgttccaat gcggcaatcg accacgtttt ggctcgcaac ctagcaacga
     5521 agccggcgtt gtgttctccg cggggagtgt acggtcttgt cggggcccaa gatcgcgaag
     5581 cgggaatgat ccggagcatt cgaaagactg aaaccggttt cagcgatacg gcgcgcttgg
     5641 ctgtcggcgc cggctgatcg ccgtcggcgc gggcgatggc ggcccgatag ctatggcggt
     5701 aaaattgtca ttgcgtccgg ggtgcaatta attcataaac gctgccgtcg cgcgacgcgg
     5761 cagcgtgggc gttcttgggg gagggcccgc ttcgcctcag tcgtcgacag cgtgtgtgga
     5821 gtgccggctc gttcggggtg gacggccggc atctccccgc gacgcttcac attcctgtcg
     5881 gttgcatagc catcgcgaac gcgcgagcct cgcgtcatgc gttgcctggt ttttctcgcg
     5941 tgtctcgtcg cggcggcgtg cggcgtcgag gcggcaagct tcgactgtgc caaggccgcg
     6001 acggcagtcg agaaggcgat ctgcgccgat ccaggtcttt cccaggccga cgagcgcatg
     6061 gcggaggcct accggcaggc gatggctgcc agcttggcgc cgcgcacctt gcgcaccgac
     6121 cagatccgct ggctcgccgg gcgcgactca ggcaatacgc tcgacggtct gcgcgaaagc
     6181 tacgaccgac gcatcgccct gctcggcgag gaagcgggca agtggcaaag cgtgcgccgc
     6241 gatgtgagcg aggcggcggc acgcctgacc tgcgtggtgc cgcccgatcc accggacggc
     6301 ccgtgtacgg tcgacgcctt tggctatgtc gccggttcgg gcgacgacct tgccttccag
     6361 ctccaaagct accgcactgg gcagttccgc gccggtggcg gcgtggtggt gtttcgccgc
     6421 cacggcacga cgctgtcgcc cgtggtcgcg accgccgtcg atggcgtgca tttcaatccg
     6481 cccagcgtgg tgcaatcgcc cgccggaagc ctgctcgatg tatccggtac catggagggc
     6541 accggcgcct tcaacgccgg ctcgctctac ctagcggacg gtgaaaagct cagtgaaatc
     6601 gacagcgaga gctggctgga cgatctcgcc aagcggctgc ccaaaggctg gggcgcctgg
     6661 aagggaatct tccccgacta ccgcacgctc accgccagca ccccgctgtg gaagagcagc
     6721 gacggcaact gctgccctac cgccggccgc gccacgctca agctcggtat ccaggatcac
     6781 cggttggtga tcctcgacct tcacatccgc aacggcgagg cggcggcaca aggcaattga
     6841 gtggctaacg ccgcttgcag tcgaaggtga tcggcctcgc tgtaaaggtc ggtggctggg
     6901 cgttggacgg tttcaccttg cgcggccagg tgccgctctt caggcggcct tccacgatcg
     6961 gcagcagatg ctggaaaaac acccaggcgc gcaggcgctc gccggcatag gtgttgtgga
     7021 tggcgtcgac ataaagatca ggatcgaacg gcatcaggcg cgcgatgtcg atgaaagcca
     7081 gcttgtgggc gctggcgtac ttggcgaaga cgcgattctc gaaggcggcc agccgctcca
     7141 tgtcgtggta gcggaacggc gcatagcctt ggttgagata ttccaggatc gcccggtgcc
     7201 ggattgggtc gagcaccatg ccgtccttca ccagccagaa gaacgaggcc agcaccagtt
     7261 cggcccccga ctgctcggtc gcgctgcgga tggcatcgag atcgcgaacg atggtcgaga
     7321 gcttgatcgg cagatcgggc cggccgatgt cgggatcgcg ctcgtcaacg ccggtcggcc
     7381 agaccagctt atagtcgtcc ttgggccatt cgccgccgtc tcccggtagg ttcctcgcgg
     7441 cgaacagcgc ctggacgcgg cgcaccagcg cgaattcatt gccgagcgct tggccgagcg
     7501 aggcaagcca gcccgggccg cttttatcgc cttcaacggc agcaggcggc gggcgagcgg
     7561 gacaactcgc ctccggcgac aacgacagcc cggtcggccg gtttggcagc cccgttgcga
     7621 cggtgctgag atcgaactgg ttggcgccct cgtagtaaac caggaggtca ggctggagcg
     7681 gcagcacctc ctcgcggacg atgacgacat tgtcagtcga ggtgatgctt tcgcggccgg
     7741 cgttcagcac ctcgaacttc aggtcgagct tgcgcgtctc ggcccacaga ttcagccaat
     7801 ggccgatgaa ttccgggtac gagtacggct ggaagtgact gccgacggtg gtcgaggcgc
     7861 cgatgaaagc gatgcgcact gtcctaggct ggcgctggaa cggcacgggc ggcccacgaa
     7921 agccgtagtc gttggtggtg agccgcagcg gcgtcgtggt gttgggcaga aatcgatagg
     7981 gcggccgctt ttcacccggc ggcggatcgt agacgaagag atggcccggc gccccgcaga
     8041 gatagacgtg ctggcaagga tcaccgacga actcggcatt ccacgccttg aacatgtcgg
     8101 cccgacgcgt gccttcggtg atgccgcttt gctctacctt gcgcaccagc gcgcgccact
     8161 cctccggcac cggccggagg ttgggcagcg tcggcggatc ggcgaaaaac cagtcgcgtt
     8221 ccacaccggg cgcccgggcg atttcctcga gatggcgggt tgccggaccc gaatcgtcgg
     8281 ccgcatccag ccagcgcacc aggaattcgg ccacggcggt gcagagcgtt accgaaacca
     8341 cgaccagcag aacgttcaac cgtctttttt tcacggcagg gttactacac gattcgtcga
     8401 tttccggcca acagggtgta aactgcaggc cagtcaggct tttacatcca gcttttagcg
     8461 atggcgaagg gttccggtcc gggcaagagg gttgtcgtca cgccacgcat gctgcgcgcc
     8521 ggcgcgcttg cgcttgccac cctgggcgac gtcagcgact acgaggtggt ggggacggtc
     8581 taccgcgcga tggctgccgt cgcgccgcag cagaccaagt cggccgagca cgtgccgccg
     8641 gccaacttcc tggaagtgat gcggctcatg cggtcgggcc gccgcgacgt ctagtccgcg
     8701 aggcacgaat ttcgcgagtc aaactgctgg gagtgcgcaa ctcctcaggc gaagtaacct
     8761 tcgccttgtg ttgcgcatct tttctggcta aggcaacgat gcatgagcgc cacttcagcg
     8821 cggagattac tccgcgcgca gtggcgcact ccagcgaaga gtttcatgca gttcggttgg
     8881 cttaccctcg cgctctcgcc ctcgcccgcc gaggatcagg cgcgcatcga gcagttgatc
     8941 gagcaggcct gcgcggccga gcggctgggc ttttccgacg tctggctgac cgagcactat
     9001 ttcaccggcg agagcgtcta caacgattcg ctgatgtttg ctgcagccct tgccatgaag
     9061 accgagaagg tccgcatcgg tttcgccgtg gtgcagacgc cgtttcatca tccggtgcgg
     9121 ctcgccgtgc agctggcgct gctcgacaat ctcagcaagg gccgcatcga tgtcggcatc
     9181 ggcaagggca cggtctacaa cgaatacgag ttcgtgggcc acgggcttcg cagccacgac
     9241 agccgcgagc gcatggagga gacgatcgac atcctcgagc gcgcatggcg cgagtcgccg
     9301 cttacctacg agggcaagtt ccataagatc catatccctg ccatccgccc caagccggtg
     9361 caacaacccg gcccgccgct gtggcgcagc gtcatctcgc ccggctcgtt cagggaatgc
     9421 ggcaagcttg gcgtgccgat cctcaccgcg cggcttcccg tcgagcgcat aaaagagcgc
     9481 tgggcgacct atgccgccgg catcgacgaa gggcgccatg acgagaaaac aaaagcgcgg
     9541 ctgcttgccc aaagcgcgct gtggcgcaac gtctatgtgg ccgactcaga cgcccaggcc
     9601 gaggacgagc tcgccggcct gctggccgat acgcgcgccc acatgatgca tgtgcgcgaa
     9661 gcctacaatc cgcacgactt tcagcccgac cccgcgacgc tgaacgcctg gaccgatccc
     9721 aaggtcccgg actccgaggc gatccccttt gcgctcaaga ccggctcgct ctacggcacg
     9781 gccgcgcgcg tgcgcgagca ggtggccgaa ctgcgcgacg tcggcgtgaa acatctgctc
     9841 tgccagaccg gcttcggcgc catgagccat gtgcggaaca tggcctcgat gcgccggttc
     9901 ggcgaacggg tgatgccggc gttcgggtga agagagctag cggcggctcg tatagcgccc
     9961 gtcatccagg cccggaccga cgcaccagtt gagctgctcg agcggcaggt gctgggccga
    10021 ggcgaccatg gcgacggcgc cgcggtcgat gcagtggccg ttgttgcggt cgtagaccgg
    10081 cgccatcagg tgaccgtgcg gatcgtgccc ggcgcccagc acatggccaa gctcatgcag
    10141 catcacggcg gtgagatcgc gcatggcgaa acggtcgccg atcacataga caaagccgcc
    10201 gccgcgactg cccaggcggc caccgcccac ggtcatggcc agcgccgtgc gctcgcgcgc
    10261 ggcaggatgg cgactgtcga ccttggccac gatccaggcg cccgaccggc ggagctgcgt
    10321 caaggtctgc tcggagggat cctccggcag caggctgacg cgaaagcgca ccaggccgtt
    10381 cagcacgtga ttccactgcc gaaggccgag cccgatgcgc tcacgctcgt cgcgcgtgaa
    10441 atcctgatcg acatagacgg tgagggtgtg gccggcggtt gtggcggcga caggtgccgg
    10501 cttgtcggta tagcggtagg ccgcgttgtc gtagggattt gtcgccgccc ggacaggcgt
    10561 cagggacaga aaaatgcccg ccagcaaaag ggcgaggccc gaaaccacca gacttgcaac
    10621 gagccgcgcc agccgcacca aactctcccg ctctacagcg gctttacgga ccggcgcgcg
    10681 gcactatccc tgcttgaatt aaggcgttct ggaggcggtt cagcagtctc ccacccgctt
    10741 gccgctcagc accgaactgc ccttggccgt ggtgccggcc ttgtccttga ccacgagttg
    10801 gcccaggcct tgatagctgt cggatttgta gctgacctcg gcgttggcgg tgacgcccgg
    10861 cgtctggtcg gtagccgggc agacggtggt cgccttgaag atgccggcct gcttggcgcc
    10921 aggcgtaaag gtgcagccat gcttggcgaa atcctcaggc gacggataga gcaggcgttc
    10981 gaggatcgcc tcgccgccct tgacgcagac gcgcttggag ctcgacggca tcgcctgcac
    11041 gccttccatc gtcgtcttgt cggtgacttc ccataggccg ggttggatgg cggtctgggc
    11101 ctgggccgga agggcggcca gcgacaggct gacggcgacc atccagacaa acgatttcat
    11161 cgggcaaaat tctccgggca attcttcgcc tggagtagca cggtccccag caaaaagccc
    11221 gcaccgggcg ttcgtccggt gcgggctaga ggatcgtacc gcttaccagt aggtcggcgc
    11281 gttgtagtac ttgtccaccc gtcggccgta gtccggggtc cagaggaagt cctcgtccat
    11341 gtcgtagctc ggtgcgttct cgagcatctt cttatcgaga ttgacgacat agccgccctt
    11401 gctctcatcg tacttcaagg tcgaccacgg cagcggatga tacttctcgc cgatgcccag
    11461 gaaaccgccg aacgacatga cggcatagat cgccttgccg ctcaccttgt cgatcatgat
    11521 gtcgtcgacg gtgccgagct tctctccttg catgttgtag acatcggtcc cctcgacctt
    11581 ctcggcggcg atcagagtcc cggatgtgat tttcgtggcg tcggccatgg ccttctccct
    11641 gcaatggttg gtgagtgccc gataaacgcc gagtcgcgca ggccggttgc cgcctcgact
    11701 cgggcacggc aacggcgcga ggcttcgatg ggaccgctta ttgtggaggg aagtgacctg
    11761 cgacttctgc ggtgagaccg ccgagatgaa gcaggcgctc ttggcgatgc tggaactcgg
    11821 cacaggacgc caatttcgaa ttcaatgcgc gcggcgagcg gtcgacaagc gctgccaacg
    11881 cgtcgacgcc aatttgcgtt gcaccgaagc cttgcgaaat gagtcaagcg gccgatgaga
    11941 aagcaaatcg gtgatcaagt cgtgaccgcc tgacacggca tcgctcggcc tattgcactc
    12001 gactgccatc gcggcctcaa aaaactccat gaaaatcgcc gctttatggc ggtgccgtcg
    12061 tcgccgtgcg gcagcgagac gcggcactcg gacagaagcg cgcccgatca aacatgcgcg
    12121 caacgcctcc cgacattgcg acgttcttcc cgcgatccgt ggacagacgg aaaagagcgg
    12181 atgcttccgg ttccattccg gcgagcaatc gatcacaagg ggaatacaaa tgacagtgga
    12241 acgtgagcag agtgttgtac taccgctgag tgcggtgccg gcggtgccct accccgccaa
    12301 ggcggagctc atccgtgttc ttctggtcga agacgaccag tcctttaggg aagtcctcgc
    12361 cgacgagctg tccgagcacg gcttctccgt ccagagcttt gccgaaggcg catcgttgct
    12421 ggctgcgatc gacgcggccc tcgacgccga catcattgtc ctcgactgga gcctgcccaa
    12481 gacgtcgggc atcgacttgc tgccccagct gcgccggctc ggtgtaagct tgccgatcgt
    12541 attcctgacc ggccgggccc tcaccgaata cgaaagcctg gctttcgatc gaggtgcgat
    12601 cgatttcatc gacaaggcgc gcggcgtcga cgttctcgtc aagcggctga ggcgcgccgt
    12661 cgacgcggcc aaacccgcgg cccatcgccc ggccgacaaa tccgtggtct gcggccggct
    12721 tgtgctgagg ccgagcgtca gccgggccta ctgggaccaa gcggatgtcg gcctcaccct
    12781 cggtgaatac aacatcgtcc aactgctggc gtcgaacgcc ggtcgctatg tgacttaccg
    12841 cgcgatctac gaccgtctgc actatgaggg cttcatcgca gggagtgggg aacatggcta
    12901 tcgggcaaat gtccggtcgg caatcaagcg catccgcaac aagttccgcg aatgcgaccc
    12961 tgcgtttgtc gagatcgaga actacaccgc tttcgggtat tgctggggca agccgggcgg
    13021 catcggttga acgcggccgc accgcgtcgc gctcgctcac tctcaggctg ttcagcctga
    13081 ttgcgctgct ctcggccctg ccggtcgtgc tgtgcggcta tctcgaaagc agcgagcgcc
    13141 gcgcccgcga ccagatatgg ctcggcctgc gcgatcgtgc ggcggcgatc gcccatacct
    13201 tctcgaccga gcagatgacc gaccgcacgc gaaccgcggg ccgcagcgcg cagctcgcgg
    13261 gctttagcgc ggaaaccggc ggcacgaccc cgcgacctgc gcttcccgcc cccgcgccga
    13321 cgcccgagtc cgtggccgcg ccgaccccct cggttgccat gctcgagccg ccgggcttcg
    13381 agttggcgcg cgcgtcagaa ggcgcgcaag ggtggctcct gacggcgggc tattgggaga
    13441 cgcccgagat gcggctggcg gcctttgcct gtctctccct ggtggcgctg gccatcctgg
    13501 tcgtcgtcag catcctgcgc agcctgcgcc gctttcggga ggccgccgac gagatcgtgt
    13561 tcggccgcgt cggcgacgag gcgctgacag cgcgcaacgg cgtgcgcgag ctgtccggcg
    13621 tggcccggct gctcgacagc ctggtgttcg atctgcgcta catgtccgac caggtgcgcc
    13681 tgaccgccga ggaaaacgcc cactcgctgc gtaccccgct ggcgacgatg cggacggcct
    13741 tgggggcgat ccaacgcagc ctgccgcccg acgagccgcg ggcgcagcga gcgctcaaga
    13801 tcatcgacat ctcgctcaac cgcctgtcca atgtcgtcaa ttcggcacag cgcaacgaca
    13861 cgaccatggc cgatctcgtc gccgcgccgc gcgacccggt cgatctggcc gaactgaccc
    13921 gcgatgtcct cggcgaagcc ggcggacgcg cgcaagcccg caatatcctg tttcgcgaga
    13981 agctgcagga cgcggtcatc gttcatgcca actgcccggc cctcaagacg gcactgctgg
    14041 acgtcctgac gagtgcggtg aacgcctcgc cgcgctatgg cgagatcagc gtcacgctcg
    14101 aggccggcca caccgacgcg cgcctcacgg tcgaggaccg gggttgcgac ggcgacgcgc
    14161 ccgagctgtt cttccagcac gatttcgcgc catccagcca agccaatccg ccggcgccgg
    14221 atcaagcccg tcctgtccgg ctcggccttt ggaacgtcaa gcgcatcgtc gaggcgttcg
    14281 gcggccaggt gacggccgac cacaatcatc acggcggcgt atccgtctcg atcatgttgc
    14341 cgtgcgacca gcgctgagcg ctggttataa tctcgacaca ctaagccacc ctcacgatct
    14401 gctatcgtct ggctgcgact aacggttgtg gcttcactgg atctatctcg gcgtcatctg
    14461 gggcgcattg acggttgtcg cactgtcgtt gtggctgcgg ctgttgggcg cgctcagctt
    14521 gccgttctgc tggaccgtgt ggaccatcct ggggcaggcg tcgggcgcct atgtcgggcc
    14581 aaagacctgg gccgtgctgt tgatcgcggc cgctgcttcc gtgctggcgg ctcgacgcgg
    14641 cccgcaacgc gatgagttgg ccagtggtcc cccgctcgac ccgttgcacg cgcggctatt
    14701 gtggtgccga ccacaaggct gggcggcggg gtccttcgtc ggcggccgcc tcgtctccgg
    14761 agcacgtgat ctgcggttgt tgccaacgca gccggcgtga gttcttattt ctgggcaacc
    14821 ttaggcccat gacagacgtt ggttctctta atgtcgatgc tggccgagaa ggaaacgact
    14881 tatccgctgg aagggcggaa gatcctgatc gtcgaggatg aggggccaat cgccctcaac
    14941 ctcgcttctg ccgtcgccca ggcgggcggc atcgtgatcg gaccgacacc ctcggtggcg
    15001 ggctccttcg ccctgatggc cgagcacacg ctggacggcg cgctgctcga catcaggctg
    15061 cggggcgaga cgtcgtttgc tttggccgac gtgctggccg tgctcggcat ccccttcgta
    15121 ttcgtgagcg gcctgtcgag cgcgttgatg ccctatccgc accgcgaccg gcccctgttc
    15181 gacaagccct acgaggcggc taatgtgatc gccacgctgg cgcgactggt gaaggccgct
    15241 gccgcctgaa gcgcagcgtc aggcttgtgg aggccgtacc tcggtgcctc gccgcggccg
    15301 gccggtcacg ctgtcgatcc ggcgccgcgg ctcgtgcagc tgcaagcgcc cgggcgcttc
    15361 gcatcaccgg ccgcaacctc aggggacgga gcagcgttgc cgcagcgaga ggtccatccc
    15421 tctcacccca gccgggtccc gcgaacctga cgtccggctg gtctccgccc gcccgactct
    15481 cccccgttgg gcgggcgttt tttccaccgc gttcgggttg tcggtcatgc aaaggaagaa
    15541 tgtcgtccag ctcggctctc aggaacacga aatacttcgc gccatcgcca ggtccccgtc
    15601 ctccccactc tcttccatgc agcgcctgcg tttcgaaatg ctcggcctga tcgaggaccg
    15661 cgccaagggg atctgcctta ccgaacgtgg tcgcaagctc gcttccgagc cgatccccgc
    15721 ttctccaccc acgcaggcgg cgcgcgatcg cagcgggccg cgcgacaagc gcggacggcg
    15781 cctcggccac cagcgccaca cgccgttttg agacgtgggg acaaggccgg gtggcaggcc
    15841 ttgaagcgga aggtcacttt tttgttacag gctcaagacg cgctatggcg gattggagag
    15901 gtcacggcca ggtcgggcca tcgcttgcgc aaagtggcaa ccatgtcctc cacccgagcc
    15961 gccaggatgc gctcgccctt gaaagcggtt gcagccctgg ggtcgcccgt agcgccggtc
    16021 cgctcgaagg gtccgtcgag cgcgagcctg tcgaggcgca cgcttctagg ctccagcgcc
    16081 agcatcaccg aggtctcgcg ctcgtcggca tgaccgccct cggggacgtc gagcagcgtg
    16141 tcggccgcag cgcccagtcc gcgcatgtgc agcaccaaaa cgtcgtcggc gccggcggcg
    16201 acttcgtcga tcggcttctc ggtcgagact ccggtattga ggatcacgat gcgccgcacg
    16261 ccatggccgc gcaggctggc caaaagctcg gccagcaacg ccttgaaagt c
//
LOCUS       DASWGA010000178         2201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1664213, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000178 DASWGA010000000
VERSION     DASWGA010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664213"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VF991_04330"
     CDS             complement(<1..363)
                     /locus_tag="VF991_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HEX9555697.1"
                     /translation="MIALDLYLAFVLACVVLIVIPGPNAALIVANSVAHGGRFGLLTV
                     AGTSSAVVVLLTLTVVGASVVLDVLAASFDWLRWAGVAYLIWLGIAAWRAPAADLAQV
                     GPQARSARLIFARGFLVGL"
     gene            complement(360..1220)
                     /locus_tag="VF991_04335"
     CDS             complement(360..1220)
                     /locus_tag="VF991_04335"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555698.1"
                     /translation="MSNGGNHQRIRFDGQVVIVTGAGRGLGASYAKLIASLGGLVVVH
                     DAGVAQDGSGFDRSVADAVVSAIVAEGGIAAACYDNLDRAAACRRVVEFALDRFGRID
                     ALVHNAGLVIFSALEETDLGVWDRMVAIGVNAPFHLARAAAPHMARQGYGRIVLTTSG
                     RAMRVTDCLPGLVAYSTTKMAQVGLMVGLAAELRDAGVRSNAISPVAATRVLRRSAPE
                     LRPELVAPGVAFLASAACHVSGLVLAAAGGRFSAAQWNESHEVDFGPSPASVDDIAAR
                     WDEIAGTLRT"
     gene            complement(1217..1930)
                     /locus_tag="VF991_04340"
     CDS             complement(1217..1930)
                     /locus_tag="VF991_04340"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9555699.1"
                     /translation="MAAFLLVPGAWLGGWCWRDVASHLRAEGHTVVAATLTGLGERAH
                     LLDRQTGLDTHVDDIVALMHYRYLKDLVLVGHSYGGTVITAVAERVPDQIQSLVYLDG
                     SVPRNGQSNNDVVGPDLTAHIRQEAMSHGDGWRVPPALVAEWGLSDSMVAWVEPRLTA
                     HPLRSLEDRVGLRSKAAASLPRAFLRTSTESALYARLMVRARDAGWYCRDVGGGHYPM
                     FTNPQAVAVALTDFAARLA"
     gene            complement(2006..>2201)
                     /locus_tag="VF991_04345"
     CDS             complement(2006..>2201)
                     /locus_tag="VF991_04345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HEX9555700.1"
                     /translation="SAAVPTELLVLGCGKRAAFIAPDICAALKGAGLALEVVDTGSAC
                     RIYNVLLAEGRRVAAALVPL"
BASE COUNT          437 a          758 c          708 g          298 t
ORIGIN      
        1 gaggccgacc aggaaaccgc gggcgaagat cagccgggcc gagcgggcct gcgggccgac
       61 ctgggcaaga tcggcagccg gcgcgcgcca ggcggcaatg cccagccaga tcagataggc
      121 gacgccggcc cagcgcagcc agtcgaaact cgcggccagg acatccagca caacggacgc
      181 gccgaccacg gtgagggtga gaaggacgac gacggcgctg ctggtgccgg ccaccgtgag
      241 cagcccgaaa cggccgccgt gggccacact gttggccacg atcagggcgg cgttggggcc
      301 cgggatcacg atcagcacga cacaggccag cacgaaggcg aggtagaggt cgagagcgat
      361 catgttcgca gtgtaccggc aatttcatcc caacgcgccg cgatatcgtc gactgacgcc
      421 ggcgacggac cgaagtccac ctcgtggctt tcgttccatt gggcggcgga gaagcgccct
      481 ccggccgccg cgagaacgag ccccgacaca tgacacgccg cggaggccag gaaggcgaca
      541 ccgggcgcaa ccagctcggg tcgcagttct ggcgcactgc gccgcagcac gcgcgtggcg
      601 gcgaccggcg agatagcgtt gctccgcacc cccgcgtcgc gcaattcggc ggccaagccg
      661 accatgagac cgacctgcgc catcttcgtc gtcgagtagg ccacgaggcc cggcaaacag
      721 tccgtgaccc gcatggcgcg tcccgatgtg gtgagcacga tgcggccata accttgcctc
      781 gccatgtgcg gcgcagcagc gcgggcgaga tgaaacggcg cattgacgcc aatggcgacc
      841 atgcgatccc acacgccaag gtcggtttcc tccagagcgg agaagatgac cagtcctgca
      901 ttgtggacga gcgcgtcgat ccgcccgaag cggtcgagcg cgaactcgac cacccgccga
      961 caggccgccg cccgatcgag attgtcgtag cacgcggcgg cgattccgcc ctccgcgacg
     1021 atcgcggata ccacggcatc cgccactgac cggtcgaagc cgctgccgtc ctgcgcgacg
     1081 ccggcatcat gcacgacaac gaggccgccg aggctggcaa tcagctttgc gtaagacgcg
     1141 cctagtccac gaccggcacc ggtaacgatc accacttggc cgtcgaatcg tattcgctga
     1201 tggttgccgc cattgctcat gccaaccgcg ctgcaaagtc cgtcaaggca acggcgacgg
     1261 cttggggatt cgtgaacatc ggataatgcc cgccgccaac gtcgcggcag taccatcctg
     1321 catcacgggc ccgcaccatc aaacgagcgt ataaggccga ctccgtggac gtgcgcagga
     1381 aggcgcgcgg cagcgacgcg gccgctttcg aacgaagacc gacgcggtct tccaggctgc
     1441 gcaggggatg cgccgtcagt cttggctcga cccaggccac catcgaatca gatagtcccc
     1501 attcagcaac cagggccggc ggaacccgcc agccgtcgcc gtgcgacatg gcctcctgcc
     1561 ggatgtgcgc cgtgaggtcg gggccgacaa catcattgtt ggattggcca ttccggggaa
     1621 cggatccatc cagatagacc aaggactgaa tctgatcagg cacccgctcc gcgacggccg
     1681 tgatcacggt cccgccatag ctgtgaccca cgagcaccag gtccttcagg tatcggtagt
     1741 gcatcaaggc gacaatatcg tcgacgtgcg tatcaagtcc ggtttgccga tcgagcagat
     1801 gcgctcgctc gcccagcccc gtcagcgtcg cggcaacgac agtgtggccc tccgcgcgaa
     1861 ggtgtgaagc cacatcgcgc cagcaccagc cgccgagcca ggcgcccgga acgagcagaa
     1921 acgcagccat gggaataccc cgagacctcg gtccaaatat atggatgcca gtgtgccgtc
     1981 gccaagccgc tactgcatgg ctgtcctaaa gcggcaccag tgctgccgcc acccgccggc
     2041 cttcggctaa aagcacgttg tagatgcggc aggccgagcc ggtgtcgacc acttccagcg
     2101 ccaggcccgc gcccttcagc gcggcgcaga tgtcgggcgc gatgaacgcg gcacgcttgc
     2161 cgcagcccag caccagcaat tcggtcggca cagcggcgct t
//
LOCUS       DASWGA010000179         2511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1664253, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000179 DASWGA010000000
VERSION     DASWGA010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664253"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..811)
                     /locus_tag="VF991_04350"
     CDS             complement(<1..811)
                     /locus_tag="VF991_04350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEX9555701.1"
                     /translation="MITQELAAYGYLIAAICFIMALRGLSSPVTSRGGNLYGIVGMVV
                     AIGVTVATPGVVSPWLIVGGLLIGGAVGTVIALRIQMTALPQLVAAFHSLVGLAAVFV
                     ASAAFVSPDAFGIGSPGHIKTQSLIEMGLGTVIGAITFTGSVVAFAKLQGLVTGAPLI
                     FRGQHPLNALLGIALVVLLVWFAMHGHPITFLLLIGLSLALGFLLILPIGGADMPVVV
                     SMLNSYSGWAAAGIGFTLGNTALIVTGALVGSSGAILSYIMCKGMNRSIFNV"
     gene            complement(834..1256)
                     /locus_tag="VF991_04355"
     CDS             complement(834..1256)
                     /locus_tag="VF991_04355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HEX9555702.1"
                     /translation="MDDRLAGEAAKLASQAQDLASNLKGVAQQITDMAAQGTLALPDG
                     HMPFVSLLTIFALACFVGYYVVWRVTPALHSPLMSVTNAVSSVIIVGAILAAGLRGLG
                     AAQLFGAIAVALAAVNIFGGFIVTHRMLSMFKKKPVKK"
     gene            complement(1266..2417)
                     /locus_tag="VF991_04360"
     CDS             complement(1266..2417)
                     /locus_tag="VF991_04360"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEX9555703.1"
                     /translation="MKIAIVKERRPHETRVAATPETVKKLKALGVEEIAIEAGAGVTA
                     AYTDQAYTDAGAMIVPDAASAVAAADILFKIQRPMSTAEGTDELALLRQGQVLMSPLS
                     ALTERELVHALAAKGVTAFALELIPRITRAQSMDILSSQANLAGYKAVLLAADNYGRI
                     FPQMMTPAGTLAPSRAFIMGVGVAGLQAIATARRLGAIVTATDVRPATKEQVQSLGAK
                     FVAVEDEEFKAAETAGGYAKEMSAEYRAKQAALVAEHIKIQDIVITTALIPGRKAPVL
                     VSEDMVKTMKPGSVIVDMAVEQGGNCPLSEYGKTVEKYGVKIIGPANLPGELATDSSS
                     LFARNLLNFITPMVDKETKTLKIDIGDEVVKGTLVTQNGQIVHPALSQN"
BASE COUNT          437 a          821 c          830 g          423 t
ORIGIN      
        1 tcacattgaa gatcgagcgg ttcatgccct tgcacatgat gtagctcagg atcgcgcccg
       61 aggagccgac cagcgcaccg gtcacgatca gcgccgtgtt gcccagggtg aagccgatgc
      121 cggcggccgc ccatcctgaa taggaattga gcatcgacac cacgaccggc atgtcggcgc
      181 cgccgatcgg caggatgagc aggaagccga gcgccagcga cagcccgatc agcaggagaa
      241 aggtgatggg atgcccgtgc atggcgaacc acaccagcag caccaccagc gcgatgccta
      301 aaagggcgtt gagcggatgc tgaccgcgga aaatgagcgg tgcgccggtg accaggccct
      361 gcagcttggc gaacgccacg accgagccgg tgaaggtgat ggcgccgatg accgtgccca
      421 accccatctc gatcaggctc tgcgtcttga tgtggcctgg cgagccgatg ccgaaggcgt
      481 cgggcgacac gaaggcggcc gacgccacga acaccgccgc gagaccgacc agcgaatgga
      541 acgccgccac gagctgcggc agggcggtca tctggatgcg cagcgcgatg accgtgccga
      601 cggcgccgcc gatcagaaga ccgccgacga tcagccaggg cgagacgacg cccggcgtgg
      661 cgacggtgac gccgatcgcc accaccatgc cgacgatgcc gtagagattg ccgccgcgcg
      721 acgtaacggg cgacgacagc ccgcgcagcg ccatgatgaa acagatggcc gcgatcagat
      781 agccgtaggc ggccagttcc tgggtgatca ttcccgctcg tcccccaaac cgcttacttc
      841 ttgaccggct tcttcttgaa catcgacagc atgcggtgcg tgacgatgaa gccgccgaag
      901 atgttgacgg cggcgagcgc cacggcgatg gcgccgaaca gctgcgcggc gccgagaccc
      961 cgcagccccg ctgccaggat cgcgccgacg atgatcaccg acgacacggc gttggtgact
     1021 gacatcagcg gcgaatgcag tgccggcgtc acccgccaga ccacgtagta gccgacgaag
     1081 caggccagcg caaagatggt gagcagcgag acgaacggca tgtggccgtc gggcagcgcc
     1141 agcgtgcctt gcgccgccat atcggtgatc tgctgggcca cgcccttcaa gttgctggcg
     1201 agatcctgcg cctggctcgc gagtttggcg gcttcgccgg caagtctgtc gtccattggc
     1261 ggctcctaat tctggctgag cgcggggtgt acgatctggc cgttctgggt caccagcgtg
     1321 cccttcacga cctcgtcgcc gatgtcgatt ttcagcgtct tggtctcctt gtcgaccatg
     1381 ggcgtgatga aattcagcag attgcgcgcg aacagcgatg aggaatcggt cgccagctca
     1441 ccgggcaagt tggccggacc gatgatcttg acgccgtatt tctcgaccgt cttgccgtat
     1501 tccgacagcg ggcagttgcc gccctgctcg accgccatgt cgacgatcac cgagccgggt
     1561 ttcatcgtct tcaccatatc ctcgctcacc agcaccggcg ccttgcggcc gggaatgagc
     1621 gcggtggtaa tcacgatgtc ctggatcttg atgtgctcgg cgaccagcgc cgcctgcttg
     1681 gcgcgatact cggcgctcat ttccttggcg taaccgcccg ccgtctcggc ggccttgaac
     1741 tcctcgtcct cgacggcgac gaacttggcg cccagcgact gcacctgttc cttggttgcg
     1801 ggcctgacgt cggttgccgt cacgatggcg cccagccggc gcgccgtggc gatcgcctgc
     1861 aggcccgcca cgcccacgcc catgatgaaa gcgcgcgacg gtgcgagcgt gccggccgga
     1921 gtcatcatct gcgggaagat gcggccgtag ttgtcggccg ccagcaggac cgccttgtag
     1981 ccggcgagat tggcctgcga ggagaggata tccatcgact gggcgcgggt gatgcgcggg
     2041 atcagctcga gcgcgaacgc cgtcacgccc ttggcggcca gagcgtgcac cagttcgcgc
     2101 tctgtgaggg cggaaagcgg cgacatcagc acctggccct gacgcagcaa agcgagctcg
     2161 tccgtgccct ccgccgtcga catcggccgc tggatcttga agaggatgtc ggccgccgct
     2221 accgccgacg ccgcatccgg cacgatcatt gcaccggcgt ccgtataggc ctgatcggta
     2281 taggcggcgg tcacgcccgc tccggcctcg atcgcgatct cttccacgcc cagcgccttt
     2341 agtttcttga ctgtctcggg ggtcgcggcc acgcgggtct cgtgcggccg acgttctttg
     2401 acaatggcga tcttcatgga gtgtttgggc tggttggagg cgggaaggcg gttcgtgcgg
     2461 cgcaccttgc acagcgtgcc gttccttgcc aaggcggttt ttcgccgcgt g
//
LOCUS       DASWGA010000180         4623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1664299, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000180 DASWGA010000000
VERSION     DASWGA010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4623
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664299"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VF991_04365"
     CDS             complement(<1..757)
                     /locus_tag="VF991_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019863718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9555704.1"
                     /translation="MNASGLSPDQLKLQARARELATGPVARRAAEVDRTEQYPWDNVE
                     LLKDARLIGMTIPERYGGQGKGWLDAVLAIEALSSACAVTGRIAVETNMGAISAVMAY
                     GSEEQKKLAADMVLGGDKPAICITEPEAGSDAGGMTTRADKKGNRYVVNGRKHWITGG
                     GVSRLHLIFAKVYDEKGNEEGIGGFLAIRDETQGLRITKREPTMGLRGIPEAVIDFEE
                     MELPPSALVMPPRGLKKGFADLMTAYNSQRVGAA"
     gene            complement(754..2187)
                     /locus_tag="VF991_04370"
     CDS             complement(754..2187)
                     /locus_tag="VF991_04370"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9555705.1"
                     /translation="MDLAFALVFIVMNGAWSFAPRSLGAGIILLGGINWVVARRLFAP
                     IERYLKGEVSFEDTQRRITQLPLLTARTVAILALLLTIFRLSATYLFTDPGITGVPQP
                     TIAQVVTLCFVLPAFYFTFTYFVISDYLADLCAFIFRHRGRNLELFFGSYNAKLVVAL
                     SVISIAPLAAIIVDLFSYEGDRLKIEIANVVAVALMGVAISAYFVTRSLLQPIRILTR
                     AMGKVAEGDLGQRVPVTSNDEVGALTGQFNNMVEGLREREQIRETFGRYVDESVASTI
                     LRRQGEGVLAGETAEATILFTDIAGFTTIAEYLAPHQLVAALNDYLETVLAPIRAHGG
                     VVNTFIGDGLFASFNMPLACEGHAAAAVRAAVDIQRAVGSRTFGDQGVALDTRIGIST
                     CHVIGGSVGAGQRLSYTLLGDTVNLAARLEELNKQYGTRILVSQSTREACSDGSVFQA
                     LGSVVVRGRSDAVAIFSIDPDGQEKKS"
     gene            complement(2268..3767)
                     /locus_tag="VF991_04375"
     CDS             complement(2268..3767)
                     /locus_tag="VF991_04375"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9555706.1"
                     /translation="MTASTDAAPRAAADAVLRRYYLAMAVPFAIDLVTLTAYSIVNGA
                     PEILPSSVLMSAAFLVGGVGIGAYLLIRPIRRFLAGELTYAEIEASVSNLPRRSAAVM
                     AACYAPMVALRNLSRPLHITFGAMVEESTWADLVASFLVGTSFNVLLTFFMVSAYLDG
                     LCDLLFKTRGVNLGIFHGRFRRKVAFALLFVAFAAMTLLAADIASYSGDRLIREATMD
                     IVASVSGTIFIYFWISQALTRPIARLDRGMRRVAKDDYTVRLPVTSDDEMGHAVSRFN
                     KMVDGLSEREYLRDTFGKYVSESVAAAILHDGQRTGRTVDTTAEATLMFTDIEGFTGL
                     SERLAPAEVARILNAYLATVVPVIQRHGGVVNSFIGDGLFASFNLPLPVKDHAAAAIR
                     AALEIQQALAGASFLADVELRTRIGINTGMVIGVTIGTENRLNYTLLGDAVNVASRIE
                     QLNKQFGTGILATESTVRAAGAFESCVKLGATDVRGHQDVVVYRVGPLQ"
     gene            complement(3829..>4623)
                     /locus_tag="VF991_04380"
     CDS             complement(3829..>4623)
                     /locus_tag="VF991_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HEX9555707.1"
                     /translation="EADQQSPVIEVAAHVQAQDRSVTPGTGSAPPLSDAERKRSLAGT
                     ELITTDGLVKETAEDIVRGKKDDLAKARAIYEWVVENTFRNPKTLGCGVGDITTMIRT
                     GNLNGKCADLNALYVGLARSVGLPARDVYGIRVVPSQFGYKALGAGSENVTKAQHCRA
                     EVWLSGSGWTPVDPADVRKVVLEEPPGNLVMTNPKVVAARKALFGSWEGNWLAFNIAA
                     DLKLPGSNQPAIGFLMYPQAEAKNGFLDSLDPDKFKYRITARELTG"
BASE COUNT          788 a         1474 c         1606 g          755 t
ORIGIN      
        1 tggccgcgcc gacccgctgg ctgttgtagg ccgtcatcag gtcggcgaag cccttcttca
       61 agccgcgcgg cggcatcacc agcgccgacg gcggcaattc catctcctcg aagtcgatca
      121 ccgcctcggg aatgccgcgc aggcccatgg tcggctcgcg cttggtgatc ctgaggccct
      181 gggtctcgtc gcggatggcc aagaagccgc cgatgccctc ttcgttgccc ttctcgtcgt
      241 agaccttggc gaaaatcaga tgcaggcgcg acacgccgcc gccggtgatc cagtgcttgc
      301 ggccgttcac gacatagcgg ttgcccttct tgtcggcgcg cgtggtcatg ccgccggcat
      361 cggagcccgc ctcgggctcg gtgatgcaga tggcgggctt gtcgccgccc agcaccatgt
      421 cggccgccag cttcttctgc tcttccgagc cgtaggccat caccgcgctg atcgcgccca
      481 tgttggtctc gacggcgatg cggccggtga cggcgcaggc cgacgacaag gcttcgatgg
      541 cgagcacggc atcgagccag cccttgccct ggccgccata gcgctcgggg atcgtcatgc
      601 cgatcagccg ggcgtccttt aaaagctcga cattgtccca cggatactgc tcggtgcggt
      661 cgacctcggc ggcccgcctg gccaccggtc cggtcgccag ttcgcgcgcg cgggcctgca
      721 gcttcaactg atcgggcgac aaaccggaag cgttcatgac ttcttttcct gaccgtcggg
      781 gtcgatgctg aagatcgcca ccgcatcgct gcggccgcgc acgacgacgc tgccgagcgc
      841 ctggaagacg ctgccatcgc tgcaggcctc gcgcgtgctc tgcgagacga gaatgcgcgt
      901 gccgtactgc ttgttcaact cctcgagccg cgccgcgaga ttcaccgtgt cgcccagcag
      961 ggtgtagctc agccgctggc cggcgccgac cgagccgccg atcacgtggc aggtgctgat
     1021 gccgatcctt gtgtcgagcg ccacgccctg gtcgccgaaa gtgcggctgc cgacggcgcg
     1081 ctggatgtcg accgccgccc gcactgcggc ggcggcgtgg ccctcgcagg caagcggcat
     1141 gttgaaggag gcgaacaggc cgtcgccgat gaaggtgttg accacgccgc cgtgggcgcg
     1201 gatcggcgcc agcacggtct cgagatagtc attgagcgcc gccaccagct gatggggcgc
     1261 caggtactcg gcgatggtgg tgaagcccgc gatgtcggtg aacaggatag tggcctcggc
     1321 ggtctcgcct gcaaggacgc cctcgccctg gcggcgcagg atcgtcgagg cgacgctttc
     1381 gtcgacatag cggccgaagg tctcgcggat ctgctcgcgc tcgcgcaggc cctcgaccat
     1441 gttgttgaac tggcccgtga gcgcgccgac ctcgtcgttt gacgtcacgg gaacgcgctg
     1501 gccgaggtcg ccttcggcta ccttgcccat ggcgcgtgtc aggatgcgga ttggctgcag
     1561 cagcgagcgg gtgacgaagt aggccgagat cgccacgccc atcaacgcca cggccacgac
     1621 gttggcgatc tcgatcttga gccgatcgcc ctcgtaggag aagaggtcga cgataatggc
     1681 ggcgagcggc gcgatcgaga tcaccgacag ggcgaccacc agcttggcgt tgtagctgcc
     1741 gaagaacagc tcgagattgc gcccgcgatg gcggaagatg aaggcacaaa ggtcggcgag
     1801 atagtcgctg atgacgaagt aggtgaaggt gaaatagaag gcgggcagga cgaaacagag
     1861 ggtaacgacc tgggcgatgg tcggctgcgg cacgccggtg atgccgggat cggtgaacaa
     1921 ataggtggcg ctcagccgaa agatggtcag cagcagagcg aggatcgcca cggtccgcgc
     1981 cgtcagcaag ggaagctggg tgatgcgccg ctgcgtgtcc tcgaagctca cctcgccctt
     2041 gaggtagcgt tcgatcggcg cgaacagccg gcgcgccacg acccagttga tgccgcccag
     2101 gaggatgatc cccgcaccca gtgagcgggg tgcgaagctc caggcaccgt tcatgacgat
     2161 gaagaccagc gcgaaggcca agtccacgac gacgctagag gtcgccataa ggagatagcg
     2221 ccgacggatc gcggcggtgt cggccgtcgt ggcggatgtc ggtgcgttca ctgcaaggga
     2281 ccgacgcgat agaccacgac gtcttggtgg ccgcggacat cggttgcgcc gagcttgacg
     2341 cagctctcga acgcgccggc cgcgcgcacc gtgctctcgg tggcgagaat gcccgtgccg
     2401 aactgcttgt tgagctgctc gatccgcgag gcgacgttca cggcgtcgcc cagcagcgtg
     2461 tagttcagcc ggttttccgt gccgatcgtg acgccgatca ccatgccggt gttgatgccg
     2521 atgcgggtgc gcagttcgac gtcggcgaga aaggacgcgc ctgccagcgc ctgctggatc
     2581 tcgagcgccg cgcggatggc cgcggcggca tggtccttga ccggcagggg caggttgaag
     2641 gaggcgaaca ggccgtcgcc gatgaagctg ttgaccacgc cgccatggcg ctggatcacc
     2701 ggcacgacgg tggcgagata ggcgttcagg atccgggcga cctcggccgg cgccaggcgc
     2761 tcagacagac cggtgaagcc ctcgatgtcg gtgaacatca gggtggcttc ggcggtcgta
     2821 tcgactgtgc ggcccgtgcg ctgaccatcg tggaggatcg ccgccgccac gctctcgctc
     2881 acatatttgc cgaaggtgtc gcgcaggtat tcgcgttccg acaggccgtc gaccatcttg
     2941 ttgaagcggc tgacggcgtg gcccatctcg tcgtccgacg tcaccggcag gcgcaccgtg
     3001 taatcgtcct tggcaacccg gcgcatgccg cggtcgagcc gggcgatcgg gcgggtcagc
     3061 gcctggctga tccagaagta gatgaagatg gtccccgaga cggacgcgac gatatccatc
     3121 gtcgcttcac ggatcagccg gtcgccgctg tagctcgcga tgtcggcggc gagcagggtc
     3181 atggcggcga aggccacgaa caggagcgca aaggccacct tgcggcggaa gcggccgtgg
     3241 aaaatgccga gattgacgcc acgggtcttg aacaggaggt cgcacagccc gtcaagatag
     3301 gcgctgacca tgaagaaggt gagcagcacg ttgaagctcg tgccgacgag gaaggaagcg
     3361 accaggtcgg cccaggtcga ctcctcgacc atggcgccga aggtgatgtg gagcggtcgc
     3421 gacaggttgc gcagcgccac catcggggcg tagcaggcgg ccatcacggc ggccgaccgg
     3481 cgcggaagat tggaaaccga cgcctcgatc tcggcatagg tcaactcgcc cgcgaggaac
     3541 cgcctgatcg gccgaatcag caagtaggcg ccgatcccga cgccgcccac caggaaggcc
     3601 gccgacatca gtacggacga cggcaggatc tccggagccc cgttgacgat ggagtaggcg
     3661 gtgagggtga ccagatcgat cgcgaacggc accgccatcg ccaggtagta gcggcgaagc
     3721 acggcgtccg cagctgcccg cggcgccgcg tcggtcgatg cagtcatgca agcgggtata
     3781 aagcggatcg cggtggagcg aaaccgcctg gtggcccgac ggtgccggtc aaccggtcag
     3841 ttcacgcgcc gtgatgcggt acttgaactt gtccggatcg agcgagtcga gaaagccgtt
     3901 cttggcctca gcctgtggat acatgagaaa cccgatcgcc ggttggttgg agccgggcaa
     3961 cttcaggtcg gcggcgatgt tgaaggccag ccagttacct tcccacgacc cgaacagcgc
     4021 tttgcgcgcg gccacgacct tgggattggt catgacgaga ttgcccggcg gctcctcgag
     4081 cacgaccttg cgcacgtcgg ccgggtcgac cggagtccag ccgctgcccg aaagccagac
     4141 ttcggcgcgg cagtgctgtg ccttggtgac gttctccgac cccgcgccca gcgccttgta
     4201 gccgaactgc gagggcacga cgcggatgcc gtagacgtcg cgtgccggca ggccgaccga
     4261 acgcgccagg ccgacataga gcgcattgag atcggcgcac ttgccgttga ggttgccggt
     4321 cctgatcatc gtggtgatgt cgccgacgcc gcaacccagc gtcttgggat tgcggaaggt
     4381 gttctccacc acccattcgt agatcgcacg tgccttggcc aggtcgtcct tcttgccgcg
     4441 cacgatgtcc tcggcggttt ccttgaccag gccgtcggtg gtgatcagct cggtgccggc
     4501 caggcttcgc ttgcgctcgg catcgctgag cggcggggcc gagcccgtgc ccggcgtgac
     4561 cgagcggtcc tgcgcctgga cgtgcgcggc gacctcgatc accggcgatt gctggtcggc
     4621 ctc
//
LOCUS       DASWGA010000181         4688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2050869, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000181 DASWGA010000000
VERSION     DASWGA010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4688
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2050869"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VF991_04385"
     CDS             <1..249
                     /locus_tag="VF991_04385"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF025024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008198 - ferrous iron binding [Evidence
                     IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX9555708.1"
                     /translation="KHFFGAHRDNGAPTTADRAFAVSLNLNDDFEGGELVFPEYAGVK
                     VNPPAGAAAVFSCSVLHRALPVTRGRRFVLTTFFRAKT"
     gene            246..620
                     /locus_tag="VF991_04390"
     CDS             246..620
                     /locus_tag="VF991_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555709.1"
                     /translation="MIRRLLLVPALLLAGSSASAQQPLAHMEACTQWDYTNGEFGARN
                     SCERPVAILFMPLGDQRIVQRDVAPGARFNTGATESDMARGWLFTACPVGYVPNVKFS
                     VANGRTILDSLYNCLPAGSPGA"
     gene            complement(642..1313)
                     /locus_tag="VF991_04395"
     CDS             complement(642..1313)
                     /locus_tag="VF991_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555710.1"
                     /translation="MVGGAVYFFDRSDTAKPAATAQGTTPPAAAKPRVAAKPTADPDE
                     PSALSPAESERIAQLLGEARRLAQDGKFAEAKAVLDKVDASRPRLAETAQARREIDQM
                     STPQSQLALQLERARSAIEQDDRAAAEKALAEAERLSPQASEIAQLRQALQDAEQKEA
                     HRHRRIAELLTEMRQAITRRDFAAADRALNEATRLDVRDPAIDPARVELARAQDTDRK
                     KDAKQ"
     gene            complement(1413..2948)
                     /locus_tag="VF991_04400"
     CDS             complement(1413..2948)
                     /locus_tag="VF991_04400"
                     /inference="COORDINATES: protein motif:HMM:NF019011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M81 family metallopeptidase"
                     /protein_id="HEX9555711.1"
                     /translation="MAYRVLIAQFMHETNTFSKLPTTLDDYKRRWLIEGKAMVPRFTG
                     TRNEIGGYIDSVRKYGWQAIWAGAANATPSGKLTRECWETIRDMIVNAARKAGKLDGI
                     CLSLHGAMVTETEDDAEGALLELLRGVVGPDVPIATTLDLHANATVRMAKNANALVSY
                     RTYPHIDGYERAVQAAALVQEAMEGRKKPRSLLVQPAMLEGAEHGRTTRPGLMLDLLA
                     KADKFEKEPGIDVVSIQAGFTWADIPYTGPSVAVSHEPGAETRAKAIAHELIDEIWRR
                     REEGAAKYYSSIADGIAAARAPSDEGSVGQKGPLVIADGTDNPGGGGYNDTTPVLKAL
                     LDAGIDNVAFGTIYDPATVQQAMKAGVGSEIQVSLGGHTDASMGAPVKAKAVVKMLSD
                     GSFKNDGPMNAGVETSMGPTAVLRIGGIDVVTISNRIQTIDLQVFLSQGIDPTSKSVL
                     VVKSVQHFRAAYAPIAREIVVVDSGGICSPDISRLKFTKLRRPIWPLDGINDPYAGTT
                     RGG"
     gene            complement(3044..3592)
                     /locus_tag="VF991_04405"
     CDS             complement(3044..3592)
                     /locus_tag="VF991_04405"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX9555712.1"
                     /translation="MSRIPYYEVENATGKHAEFLAKLKPHLNIYRMLANSENGMKGFV
                     RMGNALLHRCELDPALRELAILRVGRLSRAAYEVFQHERIAREVGVAEEKIAALRDAT
                     IEAPAFSDNEKAVLRFTDDVVRNVKASDKTLKAVQGLLTPGALVELTLTIGYYMMVCR
                     FLETTAVDGEEGQAEWLKTAKL"
     gene            complement(3622..4275)
                     /locus_tag="VF991_04410"
     CDS             complement(3622..4275)
                     /locus_tag="VF991_04410"
                     /inference="COORDINATES: protein motif:HMM:TIGR02451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016989 - sigma factor antagonist activity
                     [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ChrR family anti-sigma-E factor"
                     /protein_id="HEX9555713.1"
                     /translation="MSRHPAPDELLLDYATGALAQGPALAVALHVALDPTARRTVERL
                     GALGGALMEGEGEAAMDEAALQRTLARLDSIAVEPRPAPYRMRPGFDWAPAPLARHLG
                     ADARWRRVFGGFEEIRLHLPGDSHRVSLLRLNPGRGLPMHRHVGTEYTVVLQGGYTDS
                     TGNYAVGDFAVGPGPEQHEPIADPGPPCIALIVIEKPIVLTGPIGRWLNPLVRRDLI"
     gene            complement(4272..>4688)
                     /locus_tag="VF991_04415"
     CDS             complement(4272..>4688)
                     /locus_tag="VF991_04415"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9555714.1"
                     /translation="AQEVAQEALIMVWRKAASFDRTRASAATWIYAIARNKRIDLARR
                     SGRPVLSTEDWLAVFAPEEEDADKSVLAGQTYTRVKELLVSLSADQLVVIKKAFFEDK
                     THTAIAEELKLPLGTVKSRIRLALGRLREALEKDET"
BASE COUNT          684 a         1586 c         1553 g          865 t
ORIGIN      
        1 aagcacttct tcggcgctca tcgcgacaac ggcgcgccga ccaccgccga cagggccttc
       61 gccgtgtcgc tcaacctcaa tgacgatttc gagggtggcg agctggtctt tcccgaatat
      121 gccggcgtga aggtgaaccc gccggcgggc gccgccgccg tgttctcctg ctcggtgctg
      181 caccgggcct tgccggtgac gcgcggccgg cgcttcgtgc tgacgacctt ctttcgggcc
      241 aagacgtgat ccgccgcctg ctgctcgtgc ccgcgctgct cctcgccgga agttcggcgt
      301 cggcgcagca gcccttggca cacatggaag cctgcacgca gtgggactac accaacggcg
      361 aattcggtgc gcgcaacagc tgcgagaggc cggtcgccat cctgttcatg ccgcttggcg
      421 atcagcgcat cgtgcaacgc gacgtggcgc ccggcgcgcg cttcaacacc ggcgcgaccg
      481 agtccgacat ggcgcgcggc tggctcttca ccgcctgtcc ggtgggctat gtgcccaacg
      541 tgaaattctc ggtcgcgaat ggacggacga ttctcgacag cttgtacaac tgtctgccgg
      601 cgggcagccc cggggcgtag ccgctgtctg tgccggacgc tctactgttt ggcgtctttc
      661 ttccgatcgg tgtcctgggc gcgggcgagc tcgacgcgcg ccgggtcgat cgctggatcg
      721 cggacgtcga gccgtgtcgc ctcattgagg gcgcggtcgg cggccgcgaa gtcgcggcgc
      781 gtgatggctt ggcgcatttc cgtcaacaac tcggcaatgc gacggtggcg gtgcgcctcc
      841 ttctgctcag cgtcctgcaa ggcttggcgc agctgggcga tctcggacgc ctgcgggctc
      901 agccgttcgg cttcggccag cgccttttcc gccgccgcgc ggtcgtcttg ctcgatcgcc
      961 gagcgcgccc gctcgagctg caaggcaagc tggctctgcg gcgtgctcat ttggtcgatc
     1021 tcacggcgcg cctgcgccgt ttcggcaaga cgcggcctgc ttgcgtccac cttgtccagg
     1081 acggccttgg cttcggcgaa cttgccgtcc tgagccaggc ggcgggcctc gcctaaaagc
     1141 tgcgcgatac gctcgctctc cgctggactg agcgcacttg gctcgtctgg gtcggcggtt
     1201 ggcttggcgg caacgcgcgg cttggcagcg gcaggtgggg tggtgccctg ggcggtcgcc
     1261 gccggcttcg cagtgtcgct gcggtcgaag aaatagaccg cgccgcccac catcaagacg
     1321 acacccaagc cggccaaggc caacacgccg tatcgcatca aaggctggtc cggcagatac
     1381 acgccacggt tcctcctgga atgacagaaa cgctagccgc ctcttgtggt tccggcatac
     1441 ggatcgttga tgccgtcgag tggccatatc ggtcggcgca gcttggtgaa tttcaggcgg
     1501 ctgatgtcgg gcgagcagat gccgccggaa tcgaccacca cgatctcgcg cgcgatcggc
     1561 gcgtaggcgg cgcggaagtg ctgcacgctc ttgaccacca gcacgctctt ggacgtggga
     1621 tcgatgccct ggctcaggaa cacctgcagg tcgatggtct ggatgcggtt ggagatggtc
     1681 accacatcga tgccgccgat gcgcagcacc gcggtcgggc ccatcgacgt ctcgacgccg
     1741 gcattcatcg gcccgtcgtt cttgaagctg ccgtcggaca gcatctttac gaccgccttg
     1801 gccttgaccg gcgcgcccat cgaggcgtcg gtgtggccgc ccagactgac ctggatctcc
     1861 gaaccgacgc ccgccttcat cgcctgttgc accgtggccg gatcgtagat cgtgccgaag
     1921 gcgacgttgt cgatcccggc gtccaacagc gccttcagga cgggcgtggt gtcgttgtag
     1981 ccaccgccgc ccggattgtc ggtgccgtcg gcgatcacca gcggtccctt ctggccgacg
     2041 ctcccctcat ccgaaggggc gcgcgccgcg gcgatgccgt cggcgatcga gctatagtat
     2101 ttcgccgcgc cctcctcgcg ccgccgccag atctcgtcga tcagctcatg cgcgatcgct
     2161 ttcgcgcgcg tctcggcgcc gggctcatgg ctcacggcaa cggacgggcc ggtgtaggga
     2221 atgtccgccc aggtgaagcc ggcctggatg ctgaccacgt cgatgcccgg ttccttctcg
     2281 aacttgtcgg ctttggccag caggtcgagc atcaggccgg gccgggtcgt gcggccgtgc
     2341 tcggcgcctt ccagcatggc cggctggacc agcaggctgc gtggcttctt cctgccctcc
     2401 atcgcctcct gcaccagagc agccgcctgc accgcgcgct cgtagccgtc gatatgcgga
     2461 taggtgcggt agctcaccag cgcattggcg tttttagcca tgcggaccgt cgcattggcg
     2521 tgcaggtcga gcgtcgtcgc gatcggcacg tcgggtccga cgacgccgcg cagaagctcg
     2581 agcaacgcgc cttcggcatc gtcctcggtc tcggtcacca tggcgccgtg cagcgacaga
     2641 caaatgccgt cgagcttgcc ggccttcctg gcggcattga cgatcatgtc gcggatcgtc
     2701 tcccagcatt ccctggtgag cttgcccgac ggcgtggcgt tggccgcgcc ggcccagatc
     2761 gcttgccagc cgtatttcct gaccgagtcg atatagccgc cgatttcgtt tcgcgtgccg
     2821 gtgaagcgcg gcaccatcgc cttgccctcg atcagccagc gccttttgta gtcgtccaag
     2881 gtcgtcggca gtttcgagaa ggtgttggtc tcgtgcatga actgcgcgat caggacgcgg
     2941 tacgccattg atagttcctt ccgtcatccc gaccggagcg aagcggagtg gagggatctg
     3001 tcaggcaaca ggcccctcgg cttcgctgcg ctccgctcgg ggtttacaac ttcgccgtct
     3061 tcagccattc cgcttggcct tcctcgccgt cgacggccgt ggtctcgagg aagcggcaga
     3121 ccatcatgta atagccgatg gtgagggtga gctcgaccag ggcgcccggc gtcagcaagc
     3181 cctggaccgc cttgagcgtc ttgtccgatg ccttgacgtt gcgcacgacg tcgtcggtga
     3241 agcgcagcac ggccttctcg ttgtcgctga aggccggcgc ctcgatggtg gcgtcgcgca
     3301 gggcggcgat cttttcctcg gcgacgccga cctcgcgggc gatccgctcg tgctggaaga
     3361 cttcgtaggc ggcgcggctc agccgaccga cccgcaggat cgccagctcg cgcaaggcag
     3421 gatcgagctc gcagcgatgc agcagagcgt tgcccatccg gacaaaaccc ttcatgccgt
     3481 tctcggagtt ggccagcatg cgatagatgt tgaggtgagg cttcagcttg gccaaaaact
     3541 cggcgtgctt gccggtggcg ttctcgacct cgtagtacgg aatccgcgac atcgctcctc
     3601 cccttcaggc cgacaagcct gtcagatcag gtcgcgtctc accagcggat tgagccagcg
     3661 gccgatcgga ccggtcagca cgatcggctt ttcgatcacg atcagggcga tgcagggcgg
     3721 gccgggatcg gcgatcggct cgtgctgctc gggtccggga ccgacggcga aatcgccgac
     3781 ggcgtagttg ccggttgaat cggtgtagcc gccctgcagc acgaccgtgt actcggtgcc
     3841 gacgtggcga tgcatcggca ggccgcggcc ggggttcagg cgcaacagcg acacgcgatg
     3901 gctgtcgccc ggcagatgca ggcggatctc ctcgaagccg ccgaagacgc gccgccagcg
     3961 cgcatcggcg ccgagatgac gcgccaacgg cgccggcgcc cagtcgaagc cgggccgcat
     4021 ccggtagggc gcggggcgcg gctcgacagc gatgctgtcc agtcgcgcga gcgtgcgctg
     4081 caacgccgcc tcatccatcg ctgcctcgcc ttcgccttcc atcagcgcgc cgcccagcgc
     4141 gcccagccgc tcgaccgtgc gccgcgccgt cggatcgagc gcgacatgaa gcgccacggc
     4201 gagcgcgggc ccttgggcca acgcaccggt ggcgtagtcc agcagcagtt cgtcaggggc
     4261 cggatggcgg ctcatgtctc gtctttctcc aacgcctcgc gcaagcgccc gagggccagg
     4321 cgaatgcgcg acttcacggt gccgagcggc agcttcagtt cctcggcgat ggcggtatgc
     4381 gtcttgtcct cgaaaaatgc ctttttgatc accaccagct gatcggccga caggctgacc
     4441 aaaagttcct tcacccttgt atacgtctgg cccgccagga cggatttgtc ggcgtcctcc
     4501 tcttcgggag caaagaccgc cagccagtcc tcggttgaga ggaccggccg gccgctgcgg
     4561 cgcgccaggt cgatgcgctt gttgcgggcg atggcataga tccaagtggc ggccgaggcg
     4621 cgagttcggt cgaagctcgc ggccttgcgc cacaccatga tcagcgcttc ctgcgccact
     4681 tcctgcgc
//
LOCUS       DASWGA010000182         1684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_649719, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000182 DASWGA010000000
VERSION     DASWGA010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_649719"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..663)
                     /locus_tag="VF991_04420"
     CDS             complement(<1..663)
                     /locus_tag="VF991_04420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9555715.1"
                     /translation="MGEWVGVLIAIVSSCLGGTAAAVTRYLVGDADPLTLAILRWAIG
                     FCCVLPVALALRVRWPRREDWPGVAMLGLCFFGVFFILYNIAVGYTTAARASLALSTL
                     PLQTMIVGAILGVEPLTVRKFTGVAIAMLGVGAALATGLSAAPDGAWRGELIMTGAVL
                     CMAFYNVLSRPLIVRSSALGFLAVGMGSGAAALVIAGLLTGRLAVLESFGEAQWIAGL
                     YLG"
     gene            743..1558
                     /locus_tag="VF991_04425"
     CDS             743..1558
                     /locus_tag="VF991_04425"
                     /inference="COORDINATES: protein motif:HMM:NF037627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9555716.1"
                     /translation="MAPEPDFAAKLRGWRQRRGWSQLDLAARADISQRHLSFLELGRA
                     APSRDMVIRLATALDVPLRQHNALLLAAGFAPVWRESDLGAPQLADVREAVDYIMAQQ
                     EPYPALAVDRHWNLIKANGGAVRLVEFLVGPLAPDAKVNLADALVGPDVLRPFLLNWT
                     DVVRYFIRSVEADAAADGQPETAALLERLLAYDGVRALLKPAPTETVAGPVLPMHFSK
                     DNVSLKLFTTIATLGTPQDITLQEMRIESFFPMDRSTATTLRAWAVEARKPNA"
BASE COUNT          296 a          596 c          560 g          232 t
ORIGIN      
        1 accgagatag aggccggcaa tccattgcgc ctcgccgaag ctttcaagca cggcaaggcg
       61 gccggtcagc aggccggcga tgacgagcgc ggccgcaccg gagcccatgc cgacggcgag
      121 aaagcccagg gcgctcgagc gcacgatcaa gggccgcgac agcacattgt agaaagccat
      181 gcacagcacc gcgccggtca tgatcagctc gccgcgccag gcgccgtcgg gcgccgccga
      241 caggcccgtc gccagcgcag caccaacgcc cagcatcgcg atcgcgacgc cggtgaactt
      301 gcgcacggtc aacggctcga cacccaggat cgcgccgacg atcatggtct gcagcggcag
      361 ggtcgacagg gcgagactgg cgcgcgccgc cgtcgtgtag ccgacggcga tgttgtagag
      421 gatgaagaac accccgaaga agcaaagccc cagcatcgcc acgcccggcc aatcttcccg
      481 ccgcggccag cgcacgcgca gcgccagcgc gaccggcagc acgcagcaaa agccgatcgc
      541 ccagcgcagg atggcgagcg tcagcggatc ggcatcgccc accagatagc gcgtgaccgc
      601 ggccgccgtg ccgcccaagc agctcgagac gatcgcgatc aggactccca cccactcgcc
      661 caaggctgcc tcctgtcgcg gccatgccgg ttgtgcaatg ttctcgattg tcgtcgttgc
      721 agcaactact tggcaggtac agatggcgcc cgagccggac tttgccgcga agcttcgcgg
      781 atggcgccag cgccgtggat ggtcgcagct cgatctcgcg gcgcgcgccg acatctcgca
      841 gcgtcacttg agcttcctcg agctgggccg ggccgcgccc agccgtgaca tggtcattcg
      901 actggccacc gcgctcgacg tgccgttgcg ccagcacaat gcgctgttgc ttgccgcggg
      961 cttcgccccg gtgtggcgcg agtccgacct cggcgcgccg cagctcgccg atgtgcgcga
     1021 ggcggtcgac tacatcatgg cccagcagga gccctatccg gcgctcgccg tcgatcgcca
     1081 ctggaacttg atcaaggcca atggcggcgc ggtaaggctg gtcgaatttc ttgtcggccc
     1141 gctggcgccc gacgccaagg tcaatctcgc cgatgccttg gtcgggcccg acgtgctgcg
     1201 tcccttcctg ctcaactgga ccgacgtggt gcgctatttc atccgcagcg tcgaggccga
     1261 cgcggcggcg gacggccagc cggagaccgc ggcactgctg gagcggctgc tggcttacga
     1321 cggcgtgcgg gccctgctga aaccggcgcc gacggagacg gtggccggcc cggtgctgcc
     1381 catgcatttc agcaaggaca acgtttcgct aaaactcttc accaccatcg ccacgctggg
     1441 gacgccgcag gacatcaccc tgcaggagat gcgcatcgag agtttctttc cgatggaccg
     1501 cagcacggcg acaacgctgc gcgcctgggc cgtcgaggca aggaagccca acgcctaacg
     1561 aacagcgacg aagacgtgcg cctgcatggt ggagtcgagc gcgccggcgc caaaacgccg
     1621 ggcgacggcg gcggcggccg tctcggtcgc ggcctcgacg ccaccgggat tgcgcgcttc
     1681 gatc
//
LOCUS       DASWGA010000183         5197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_151508, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000183 DASWGA010000000
VERSION     DASWGA010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5197
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151508"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VF991_04430"
     CDS             complement(<1..368)
                     /locus_tag="VF991_04430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9555717.1"
                     /translation="MTRILLSSVATAAAVLTSAAGASAQTEIQWWHAMGGNLGETVNA
                     LAEGFNKSQTDYKVMPVYKGSYTEALTAAIAAFRAKQAPHIVQVFEVGTANMMAAKGA
                     VYPVYQLMADAKEPFDPKAF"
     gene            587..1264
                     /locus_tag="VF991_04435"
     CDS             587..1264
                     /locus_tag="VF991_04435"
                     /inference="COORDINATES: protein motif:HMM:NF022599.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2927 domain-containing protein"
                     /protein_id="HEX9555718.1"
                     /translation="MLAGFLASAPLAALGSDARDELASAAQAFEQAALRLQDSDDKPR
                     GVVRWDGPIFYTARNAQASSTIEAMAFVAVGRIAEIAHLPVERVAPDDPRANTIVVLT
                     DNESSSGLRTCFAQPSWKNWRMTKVELNLNFANIRRIDRCVVHEALHGFGFNSHPHSA
                     DSILSYVYNRSDLTLLDRHLIETLYDRRLRPGMPRTDAAKQACRILGEKMTASAADIE
                     AVCPLRK"
     gene            complement(1253..2053)
                     /locus_tag="VF991_04440"
     CDS             complement(1253..2053)
                     /locus_tag="VF991_04440"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEX9555719.1"
                     /translation="MIRAVRPSSLKRSGKVDMGWGIRLLRRSELALYWHMLQLPKVIG
                     HRGAAAYAPENTLASFREARKRGAAWVEIDVKLTADGVPIAMHDDSLKRTTGVDRLVA
                     QTLRADLPASVPTFEEAIACFGELGLGCNVEIKPCAGRETETARAAVETLRRCWPTHL
                     PPPLLSSFKDASLAAAREAAPEFARAILIGEYGADWRMRADAVGATAVNTNGEKLTAP
                     WCCEIKQAGFPLGVYTINDPAVACALFGMGVDCVITDAPDVILAALFA"
     gene            2001..2765
                     /locus_tag="VF991_04445"
     CDS             2001..2765
                     /locus_tag="VF991_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007701612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555720.1"
                     /translation="MSTFPDRFKLDGRTALITGSGRGLGWEIAKGLAEAGAKVVLHGR
                     SRERLAPRLDELKTAGHAADMLCFDMADRTGMRAEVATVGPIDILVHNVGERDRRPFS
                     EIEPDAFARLIDVDLTAAHALLSLVVPGMIERGWGRLILVTSIVADLAVPGAASYTAA
                     KGGLSALARALSAELGAKGITSNALSPGFFATETNAELIASPMGERQRQRCPAKRWAE
                     PWEIAGAAVFLASPAASYVNGHTLTVDGGVSATYLA"
     gene            2765..4255
                     /locus_tag="VF991_04450"
     CDS             2765..4255
                     /locus_tag="VF991_04450"
                     /inference="COORDINATES: protein motif:HMM:NF015557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEX9555721.1"
                     /translation="MHGFDSTQDFVSQAIVAAILVGVFALLAADRVHRLLIPIGAVAL
                     VWLISYFSPFKLISFETAQQAIDLNVILLLFAMMALVGVLKTTNVFPWAVDRLLERSR
                     GNPSRAARLIIWFTGILSAILDNVTTVIFTYPMASEMARRLKINGSAFFLPMVMAANI
                     GGTATLIGDPPNVLIGADPRTGLSFMDFIYHLTVPCTFMMIVLVWYSRRYYSADIGRS
                     ADADHAGAATPTGAALRNVPLLRATCWITVLIFAGFMTHTLTHMPVAVPAVIGIAAIL
                     LAQDYYYLKEHRPTAEERRHGVLAILEKDIEWPTLAFFIFLFVLVGAAVATGLIESLA
                     LALAWIIDRISMGFSLSPTATLLIAALLILWVSGFLSAVIDNIPYTAVTIPLVASLLG
                     QLKAGPDGQVLWWALALGACLGGNGTLIGASANVTVTGLAEKDGKRISFNEFTAFGAR
                     VAGLTLVMSSAYLALWLYIGSTVVNVAGAVILLGWLAIRSATQRNR"
     gene            4255..>5197
                     /locus_tag="VF991_04455"
     CDS             4255..>5197
                     /locus_tag="VF991_04455"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9555722.1"
                     /translation="MKRRLMLMLVATLVPNLAAAQAYPSRPVHIVNPFTAGGPTDLIA
                     RAVGQKLGEAWGKPVVVEARSGAAGMVGTEYVAKAPADGYTLLVMPTGTAVVNQYLYD
                     KLPYDTFRDFVAVSLLSIEENILVVHPTLQANSVPELIALAKANPGKLSFGSPGVGTQ
                     AHLAGELLKSMTGVDMLHVPYKGMAPALNDVLGGQISFMFLSMSSALSQMQGGKLRGL
                     GVASLVRSSSLPDLPTIAEQGLPGFKAVSWYALMAPIGTPGEVVDKIAGDIARVLRDP
                     QVRQQLLGLGLTPVGNTPAELSAMLKQEDAFWRDFIRK"
BASE COUNT          828 a         1754 c         1646 g          969 t
ORIGIN      
        1 atgaaggcct tgggatcgaa cggctccttg gcgtcggcca tgagctgata gacgggatag
       61 accgcaccct tggccgccat catgttggcg gtgccgacct cgaagacctg cacgatgtgc
      121 ggcgcctgct tggcgcggaa ggccgcgatc gcggcggtca gcgcctcggt gtaggagccc
      181 ttgtagaccg gcatgacctt gtagtcggtc tggctcttgt tgaaaccttc ggccagcgca
      241 ttgactgtct caccgaggtt gccgcccatg gcgtgccacc actggatctc ggtctgtgcc
      301 gaggcgccag ccgcgctcgt cagaaccgcc gccgccgtgg cgacggacga caaaagaatc
      361 cgcgtcatcg tcaaaagcct ccctaagaac ccccgccgat gtatcgacgg gccgcaagac
      421 tgcgatgtgt ctgttttgtt gcggtctgat ggcagtccac caagactgtg tagagaacgc
      481 aagtcccttc tggcggcgcg gccccgcggc ttgccccgaa tgtcgccctg tccagccgct
      541 gcaggttgtg gcagaaatgc tcgcgatgcg actatggcca tccgcggtgc tggccggttt
      601 cctggcgtcg gcgccgcttg ccgctctggg cagcgacgct cgcgatgaac tcgccagcgc
      661 cgcccaggcg ttcgagcagg cggcgctgcg cctgcaggat tccgacgaca agccgcgcgg
      721 cgtcgtgcgc tgggatgggc cgatcttcta cacggccagg aacgcccaag cctcgtcgac
      781 gatcgaggcc atggcattcg tggccgtcgg tcggattgcc gagatcgcgc acctgccagt
      841 tgagcgggtc gctcccgacg atccacgagc caatacgatt gtcgtattga ccgataacga
      901 atcgtcgtct ggcctacgta cctgcttcgc gcaacccagt tggaagaact ggcggatgac
      961 caaggtcgaa ctcaatctga acttcgccaa cattcgtcgg atcgaccggt gcgtcgtcca
     1021 cgaggcgctg cacggtttcg gcttcaattc ccatccgcat tccgcggaca gcatcctcag
     1081 ctatgtctac aatcgcagcg atttgaccct gctcgatcgt catctgatcg aaacgctcta
     1141 cgaccgacgc ctgcggccag gcatgccgcg gacagacgcc gcaaagcaag cctgtcggat
     1201 cctcggagaa aagatgacgg cgtcggcggc tgatatcgaa gcggtgtgtc cgctacgcaa
     1261 atagcgccgc taagatgacg tcgggcgcat cggtgatgac gcaatccacg cccatgccga
     1321 acagcgcgca tgcgacggcc ggatcgttga tggtgtagac gccgaggggg aacccagcct
     1381 gcttgatctc gcagcaccat ggcgcggtca gtttctcgcc gttggtattg acggccgtcg
     1441 cgcccactgc gtcggcccgc atgcgccaat cggccccgta ctcgccgatc aggatcgcac
     1501 gggcgaactc cggcgcggcc tcgcgggcgg cggccagcga ggcgtccttg aagctcgaca
     1561 gcaggggcgg cggcaggtgg gtcggccagc agcggcgcaa ggtctcgacc gcggcgcgcg
     1621 cggtctcggt ctcgcggcct gcgcagggct tgatctcgac gttgcagccc agccccagct
     1681 cgccaaagca ggcgatcgct tcttcgaagg tcggcacgct cgccggcagg tctgcccgca
     1741 gggtctgggc gaccaggcgg tcgacgcccg tagtgcgctt cagcgagtcg tcgtgcatcg
     1801 cgatcggcac gccgtcggcg gtcagcttga cgtcgatttc gacccaggca gcgccgcgtt
     1861 tcctggcttc gcggaaggag gccagcgtgt tttccggcgc ataggcggcc gccccgcgat
     1921 ggccaatgac tttcggcagt tgcagcatat gccaatacaa agctaactcg gaccgccgca
     1981 atagacgaat gccccacccc atgtcgacct tccccgaccg tttcaagctc gatggccgca
     2041 ccgccctgat cacgggctcc ggccgcggct tgggctggga gatcgccaag ggactggccg
     2101 aagccggcgc caaggtggtg ctgcatggcc gctcgcgcga gcggctcgcc ccacggctcg
     2161 acgagctgaa gacggccggc catgccgccg acatgctgtg cttcgacatg gccgaccgca
     2221 cgggcatgcg ggcggaagtg gccaccgtcg gaccgatcga catcctggtg cacaatgtcg
     2281 gcgagcgcga ccgccggccg ttcagcgaaa tcgagcccga tgccttcgcc cgcctgatcg
     2341 atgtcgatct gacggccgcc cacgccctgc tgagcctggt ggtgcccggc atgatcgaac
     2401 gcggctgggg tcggctgatc ctggtcacgt cgatcgtggc cgacctcgcc gtgccgggtg
     2461 cggcctccta cacggcggcc aagggcggtc tctccgcgct cgcccgcgcg ctgtcggccg
     2521 aactgggcgc caagggcatc acctccaacg cgctgtcgcc cggcttcttc gccaccgaga
     2581 ccaatgccga gctgatcgcc tcgccgatgg gcgaacgcca gcgccagcgt tgcccggcca
     2641 agcgctgggc cgagccgtgg gagatcgccg gcgccgccgt cttcctcgcc tcgccggccg
     2701 cctcctatgt caacggacac acgctcaccg tcgatggcgg cgtgtcggcg acgtatctcg
     2761 cctgatgcac ggtttcgact cgactcagga tttcgtctcg caagccatcg tggcggcgat
     2821 cctggtcggc gtgttcgccc tgctggcggc cgaccgcgtg caccgcctgc tgatcccgat
     2881 cggcgcggtc gctctggtct ggctgatctc ctatttttcg cccttcaagt tgatctcgtt
     2941 cgagaccgcg cagcaggcga tcgacctcaa cgtcatcctg ctgctgttcg ccatgatggc
     3001 actggtcggc gtgctcaaga ccaccaatgt ctttccctgg gcggtcgatc ggctgctcga
     3061 gcgctcgcgc ggcaatccga gccgcgccgc gcggctgatc atctggttca ccggtatcct
     3121 gtcggccatc ctcgacaacg tcacgaccgt gatcttcacc tatcccatgg cgtcggagat
     3181 ggcgcggcgg ctaaaaatca acggctcggc cttcttcctg cccatggtga tggcggccaa
     3241 tatcggcggc accgctaccc tgatcggcga tccgcccaac gtgctgatcg gcgccgaccc
     3301 gcgcaccggc ctctccttca tggacttcat ctaccacctg accgtgccct gcaccttcat
     3361 gatgatcgtg ctggtgtggt acagccggcg ctactattcc gccgatatcg gccggtcggc
     3421 cgacgcggat catgccggtg ccgcgacgcc gaccggcgcg gcgcttcgca acgtgccgct
     3481 gctgcgcgcc acctgctgga tcacggtgct gatcttcgcg ggcttcatga cccacacgct
     3541 gacccacatg ccggtcgcgg tgccggcggt gatcggcatc gccgccatcc tgctggcgca
     3601 ggattactac tatctcaagg aacatcggcc gacggcggag gagcgccgcc acggcgtgct
     3661 cgccatcctg gagaaggaca tcgaatggcc gacgcttgcc ttcttcatct tcctgttcgt
     3721 gctggtcggc gccgcggtcg ccaccggcct gatcgaaagc ctggcgctgg cgctggcctg
     3781 gatcatcgat cggatttcga tgggcttcag cctctcgccc acggcgacgc tgctgatcgc
     3841 ggccctgctc atcctctggg tctcgggttt tctgtccgcg gtgatcgaca acatccccta
     3901 cacggccgtc accatcccgc tggtggccag cctgctcggc cagctcaagg ccggccccga
     3961 cggccaggtc ctgtggtggg cgctggcgct cggtgcctgt ctcggcggca acggcacgct
     4021 gatcggcgcc tcggccaacg tcaccgtcac cggtcttgcc gaaaaggacg gcaagcgcat
     4081 ctcgttcaac gagttcaccg ccttcggcgc gcgggtcgcc gggctgacgc ttgtgatgtc
     4141 gtcggcctat ctcgcgctat ggctctatat cggctcgacg gtagtcaatg tagccggggc
     4201 ggtgatcctg ctcggctggc tggccattcg atccgcaacc caaaggaacc gatgatgaag
     4261 cgccgcctga tgctcatgct cgtcgctact ctggtgccga accttgccgc ggcccaggcc
     4321 tacccttcga ggccggtgca tatagtcaac ccgttcactg caggcggacc gacggacttg
     4381 atcgcgcgcg ccgttggcca gaagttggga gaggcctggg gcaagcccgt cgtcgtcgag
     4441 gcgcgttccg gcgcggcggg catggttggt accgagtacg tcgcgaaggc gcccgctgac
     4501 ggatacacgt tgcttgtcat gccgaccggc accgcggtgg taaatcaata tctctacgac
     4561 aagctgccgt atgacacctt ccgagatttc gtggcggtca gcttgctctc gatcgaggag
     4621 aatatactgg tcgtgcatcc gaccctgcag gcgaactcgg tgcccgagct catcgcatta
     4681 gcaaaggcaa atccggggaa attgtcgttc ggttcgcccg gcgtcggcac tcaggcgcat
     4741 ctcgcgggcg aactccttaa gtcgatgacg ggcgtcgata tgctgcatgt cccctacaag
     4801 ggaatggcgc ctgcgctgaa cgatgtcctg ggcgggcaga tcagcttcat gttcctgtcg
     4861 atgtcctcgg cgctcagtca gatgcagggc ggcaaactac gtggcctcgg ggttgccagc
     4921 ctggtccggt catcgtcgtt gcccgatctg ccgaccatcg ccgaacaagg tctgccgggt
     4981 ttcaaggcgg tctcatggta cgccttgatg gcgcctatcg gcacacctgg cgaggtcgtg
     5041 gacaagattg ccggcgacat cgcgcgcgtg ttgcgcgacc cccaagtgcg ccagcaactg
     5101 ctcggcctcg gtttgactcc tgtcggaaat acacccgccg aactctccgc gatgctcaag
     5161 caggaagatg ccttctggcg ggacttcatt cgcaaga
//
LOCUS       DASWGA010000184         5290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1665574, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000184 DASWGA010000000
VERSION     DASWGA010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5290
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1665574"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..689)
                     /gene="gpt"
                     /locus_tag="VF991_04460"
     CDS             complement(189..689)
                     /gene="gpt"
                     /locus_tag="VF991_04460"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000310 - xanthine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HEX9555723.1"
                     /translation="MAISAGYNKMFPVSWTELHRDARALAWRLADLGPFKGLVAITRG
                     GLVPAAIVARELNLRLIDTVCCSTYDRMERGAKVELLKGSSAEQEQGKDWLIVDDLVD
                     TGVTARAVRALLPQAHFATVYAKPAGRPSVDSYITEVSQDTWILFPWDQEAVMAKTIV
                     ELKGGQ"
     gene            831..1574
                     /locus_tag="VF991_04465"
     CDS             831..1574
                     /locus_tag="VF991_04465"
                     /inference="COORDINATES: protein motif:HMM:TIGR03717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX9555724.1"
                     /translation="MPDLSSAVFWAALWKIIIANIILSGDNAVVIAMASHNLSDKYRR
                     PAIFFGSAGAIVLRIIFCAVIGLLLSVPYLKLVGGALLFWIGIKLVVEEEESADIKAH
                     DNIWAAIWTIIVADAVMSLDNAIAIAAAAKGDFTLIVIGLVISIPIIIVGATLIAKVL
                     DRFPWLGLVGAGLIGWIAGEVMAGDGRFDEVDAGGKLVEVVKPGTIAAWLDATIPHAE
                     MVCGVFGAGLVVVVGLYLARRNARHAERS"
     gene            1615..2802
                     /locus_tag="VF991_04470"
     CDS             1615..2802
                     /locus_tag="VF991_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HEX9555725.1"
                     /translation="MAEQLWRREALAAYATLPWQSRGRLFAEPEAPSRSPFQRDRDRI
                     IHSTAFRRLKHKTQVFVYHEGDHYRTRLTHSLEVAQIARTICRTLRLDEDLGEAVALA
                     HDLGHTPFGHAGEEALHAAMKPYGGFDHNAQTLRILTKLEERYAEFNGLNLTWETLEG
                     AVKHNGPLLKDGRKLSDLPAAIVEYCQDHDLELGGHAGAEAQVAALSDDIAYNNHDID
                     DGLRAGLFEIADLRELPLVGEMFSTVAQKYPGIGSTRLIHEAVRRVINAMVEDVLAET
                     RRRLAEAKPKSVADIRALGRPVAAFSDHMTATDRTVKTFLYKRMYEHWRLNRSHSKAR
                     RVVADLFNLLFAEPNCLPSPWRERAEQAETPARARLVADYIAGMTDRFALDEHKRLFD
                     LYE"
     gene            2979..4721
                     /gene="argS"
                     /locus_tag="VF991_04475"
     CDS             2979..4721
                     /gene="argS"
                     /locus_tag="VF991_04475"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEX9555726.1"
                     /translation="MNPYRHFIGEIEGALKAMQAAGELPEKLDFSAITAEPPRDPVHG
                     DIATNAAMVLAKAAGKKPRDIAEPLLARLKANPDVVDGAVAGPGFINLKVADSFWRER
                     LRDCLKRGIAYGDSAMGEARKVNVEYVSANPTGPLHVAHARGAIVGDALANLLLKAGH
                     AVTKEYYINDAGAQVDKLGQSTYLRYREALGERIDSIPEGLYPGEYLKEIGAAIAQRD
                     GARWIDKPEDDWLPEMRAFAVSSLMAEIKTDLATLGVEIDVYSSERALVDSGAVERAF
                     QELSRQGLVYQGRLEPPKGLKPDDWEDREQTLFRATRFGDEVDRPLKKSDGSWTYFAT
                     DIAYHHDKYRRGFADMIDIWGADHGGHVKRMKAAVSAITGGKGALDIKLCQLVRVMKN
                     GELVRMSKRAGTFVTLRDLLDEVGPDVVRFTMLTRKNDAPFDFDLVKATERSRDNPVW
                     YVQYGHARTRSVMRQAAAAGVVVEGLDSVPLDRLGDAGELALLRLIAQWPRQVEAAGA
                     AHEPHRIAFYLYDLAAAFHAHWNRGREEPALRFVVEDDVELTRARLALVQGIGFVIGS
                     GLKVFGVTPVEEMR"
     gene            4869..>5290
                     /locus_tag="VF991_04480"
     CDS             4869..>5290
                     /locus_tag="VF991_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555727.1"
                     /translation="MRVNRRRGQILTVMVSIAAIASFGSVVWWAHNQDVKAGGRGLEP
                     LVVQAPPTPSRVKPENAGGLVPPNQDKEVFNRLAPGAVPTQPEKLLPASTNPRLPANG
                     LPTPAAPKPAEAEATKAPTPLQPAQPTTGGPTPPPASAS"
BASE COUNT          878 a         1819 c         1728 g          865 t
ORIGIN      
        1 cgtcggccac gcgggtcttc accgaggtgt tgccgccgcc atgcagcacc agcctgggct
       61 cgccgcccag cagacgcgtc gtgtagacgc gcagcgccag atcctcgccg atgcccttgc
      121 cggcgtgacg ggcgatcgcg gccttggcgt cggcatcgga ccacaggttc tgcatcactt
      181 gcccctcttc actggccgcc tttcaactcg acgatggtct tggccatgac cgcttcctgg
      241 tcccacggga acaggatcca ggtgtcctgg ctcacctcgg tgatgtagct gtcgacgctc
      301 ggccggccgg ccggcttggc atagacggtg gcgaaatgcg cctgcggcag caaggcgcgc
      361 acggcgcggg cggtgacgcc ggtatcgacc aggtcgtcga cgatcagcca gtccttgccc
      421 tgctcctgct cggccgagct gcctttcagg agctcgacct tggcgccgcg ctccatgcgg
      481 tcgtaggtcg agcagcacac ggtgtcgatc agccgcagat tgagctcgcg ggcgacgatg
      541 gcggcgggga ccagcccgcc gcgcgtgatc gccaccagcc ccttgaacgg cccaaggtcg
      601 gccagccgcc atgccagcgc ccgcgcgtcg cggtggagct ccgtccacga gacgggaaac
      661 atcttgttgt agccggcact gatcgccatt cgctgcgttc cctccgccgc ggggatagca
      721 tccgtcgtgc ccttcggaaa gcgtcagggt ttacagcgtc ggacgggcgg ctatggtgcc
      781 gacgccaggc ggtggggccg gccaacggga ggatatgaat ggtattcgtg atgccggacc
      841 tgtcgtcggc tgtgttctgg gcggcgctct ggaagatcat catcgccaac atcatcctgt
      901 cgggcgacaa cgccgtggtc atcgccatgg ccagccataa cctgtcggac aagtaccgcc
      961 ggccggcgat cttcttcggc agcgccggcg ccatcgtgct gcgcatcatc ttctgcgccg
     1021 tgatcggcct gctgctgagc gtgccctacc tcaagctggt gggcggcgcg ctgctgttct
     1081 ggatcggcat taagctggtg gtcgaggagg aagagagcgc cgacatcaag gcgcacgaca
     1141 acatctgggc ggcgatctgg accatcatcg tggccgatgc ggtgatgagt ctcgacaacg
     1201 ccattgccat cgccgccgcg gccaagggcg acttcaccct gatcgtgatc ggtctcgtca
     1261 tctcgatccc catcatcatc gtcggcgcca cgctgatcgc caaggtcctc gatcgcttcc
     1321 cgtggctcgg cctggtcggc gccggcctga tcggctggat cgccggcgag gtgatggcgg
     1381 gcgacgggcg cttcgacgag gtcgatgccg gcggcaagct ggtcgaagtg gtgaagcccg
     1441 gcaccatcgc cgcctggctg gatgccacga ttccgcacgc tgagatggtg tgtggcgtct
     1501 ttggcgccgg gctggtggtc gtggtcgggc tttatctcgc gcgacgcaat gcccggcatg
     1561 ccgaacgaag ttgaacgtcg tagacggatg ggttgttgag gaggttcgcg gatcgtggct
     1621 gagcagttgt ggcgacgcga ggcgctggcg gcctatgcca ccctgccgtg gcagagccgc
     1681 ggccggctgt tcgccgagcc ggaagcgccg agccgcagcc cgttccagcg cgaccgcgac
     1741 cgcatcatcc attcgacggc gttccggcgg ctgaagcaca agacgcaggt cttcgtctat
     1801 cacgagggcg accactaccg cacccggctc acccattcgc tcgaagtggc gcagatcgcc
     1861 cgcacgatct gccgcacgct tcgcctcgac gaggatctcg gcgaagccgt ggcgctggcc
     1921 cacgacctcg gccacacgcc gttcggccat gccggcgagg aggcgttgca cgcggcgatg
     1981 aagccctatg gcggcttcga ccacaacgcc cagacgctgc gcatcctcac caagctcgag
     2041 gagcgctatg ccgaattcaa tggcctcaac ctcacctggg agacgctcga aggcgcggtc
     2101 aagcataacg ggccgctctt gaaggacggc cgcaagctct ccgacctgcc ggccgccatc
     2161 gtcgaatatt gccaggacca tgacctggaa cttggcggcc atgccggggc cgaggcccag
     2221 gtcgcggcct tgagcgacga catcgcctac aacaaccacg atatcgacga cgggctgcgc
     2281 gccggcctgt tcgagatcgc cgacctccgc gagctgccgc tggtcggcga gatgttttcg
     2341 accgtggccc agaaatatcc cggtatcggc tcgacgcggc tgatccacga ggcggtgcgc
     2401 cgggtgatca atgccatggt cgaggacgtg ctggccgaaa cccggcggcg gctggccgag
     2461 gccaagccga aatcggtcgc cgacatccgc gcgctgggac ggccggtggc ggccttctcc
     2521 gaccacatga cggcgaccga ccgcacggtg aagaccttcc tctacaagcg catgtacgag
     2581 cactggcggc tcaaccgctc gcattccaag gcgcgccgcg tcgtggccga cctgttcaac
     2641 ttgctgttcg ccgagcccaa ttgcctgccc tcgccgtggc gcgagcgcgc cgagcaggcc
     2701 gagaccccgg cccgcgcccg cctggtagcc gactacattg ccggcatgac cgaccgtttc
     2761 gccctcgacg agcacaagcg gctgttcgat ctgtacgagt gagtctatcc gccaatcagg
     2821 ctcctctccc ccgccagggg gagaggttgg gtgagggggc caggcccgtc gattccccct
     2881 cacctagcct ctccccctag cgggggagag gaatttgagc cgagaggtat gacttcgctc
     2941 ggatgacaaa attgcctgga taggcaatac ccccgcgcat gaatccctac cgccatttca
     3001 tcggcgagat cgaaggcgcg ctcaaagcca tgcaggcggc cggcgaattg ccggaaaagc
     3061 tcgatttttc cgccatcacc gccgagccgc cgcgcgatcc ggtgcacggc gacatcgcca
     3121 ccaacgccgc catggtgctg gccaaggccg ccggcaagaa accgcgcgac atcgccgagc
     3181 cgctgctggc ccgcctaaag gccaatcccg atgtggtcga cggcgcggtc gccgggccgg
     3241 gcttcatcaa cctcaaagtt gccgactcct tctggcgcga gcggctgcgc gattgcctga
     3301 agcggggcat cgcctatggc gattcggcga tgggcgaggc caggaaggtc aatgtcgaat
     3361 acgtctcggc caacccgacc gggcctttgc acgtggctca cgcgcgcggc gccatcgtgg
     3421 gcgatgcgct cgccaacctg ctgctgaaag caggccatgc cgtcaccaag gagtattaca
     3481 tcaacgatgc cggtgcgcag gtcgacaagc tcggccagtc gacctacctg cgctatcgcg
     3541 aggcgctcgg cgagcgcatc gactcgattc ccgagggcct ctatcccggc gagtacctga
     3601 aggagattgg cgccgccatc gcccagcgcg acggcgcgcg ctggatcgac aagcccgagg
     3661 acgactggct gcccgagatg cgcgctttcg ccgtctccag cctgatggcg gaaatcaaga
     3721 ccgacctcgc cacgctgggc gtcgagatcg acgtctattc ctccgagcgc gcactcgtcg
     3781 attccggcgc ggtcgagcgg gccttccagg aactcagccg ccaaggcctg gtctatcagg
     3841 gccggctcga gccgcccaag ggcctgaaac ccgacgactg ggaggatcgc gagcagacgc
     3901 tgtttcgggc caccaggttc ggcgacgagg tcgaccggcc gctcaagaag tccgacggca
     3961 gctggaccta cttcgccacc gacatcgcct accaccacga caagtaccgc cgtggttttg
     4021 ccgacatgat cgacatctgg ggcgccgacc atggcggcca cgtgaagcgc atgaaagccg
     4081 cggtcagcgc tattacgggt ggcaagggcg ctctcgacat caagctctgc caactggtgc
     4141 gggtgatgaa gaacggcgag ctggtgcgca tgtccaagcg cgccggcacc ttcgtcaccc
     4201 tgcgcgatct gttggacgag gtcggccctg acgtcgtgcg cttcaccatg ttgacgcgca
     4261 agaatgatgc gcccttcgac ttcgacctcg tcaaggccac agaacggtca cgggacaacc
     4321 cggtctggta cgtccaatac ggccatgcgc gtacgcgctc cgtcatgcgg caagccgccg
     4381 ccgccggcgt cgtggtcgag ggcttggaca gcgtgccact tgaccgtctg ggcgacgccg
     4441 gcgaactggc gctgctgcgg ctgatcgccc aatggccgcg ccaggtcgag gcggccggcg
     4501 cggcccacga gccccatcgc atcgccttct atctttacga tctcgccgcc gccttccatg
     4561 cccattggaa ccgcggccgc gaggagccgg cgctgcgttt tgtcgtcgag gacgacgtcg
     4621 agctgacgcg ggcgcgtctg gcgttggtac agggaatcgg ttttgtgata ggatcgggcc
     4681 taaaggtctt cggcgtaaca cccgtcgagg aaatgagata acgaatgcac atccgccggt
     4741 ccccctccgg cgacggtccg acgatctacc ggcccagcga gtcggtcgcc ctgcggctcg
     4801 atccgccgcc tcggcctgtc gcgcatgaac ctggttcgat tccgccgccg ccgcgggact
     4861 cgctgttgat gcgcgtcaac cgccgccgcg gccagatcct gacggtcatg gtctcgatcg
     4921 ccgccatcgc gagtttcggc tcggtcgtgt ggtgggccca taaccaggac gtcaaggcgg
     4981 gcggcagggg cctcgaaccg ctggtcgtgc aggcgccgcc cacgccgtcg cgggtaaaac
     5041 ccgagaacgc cggcggcctg gtgccaccca accaggacaa ggaagttttt aaccgcctgg
     5101 cgccgggggc ggtgccgacc cagccggaaa agctgctgcc ggcctcgacc aatcccaggc
     5161 tgccggccaa cggcctgccg acaccggccg cgcccaagcc cgccgaggcc gaagccacca
     5221 aggcgccgac cccgctgcag cccgctcagc ccacgaccgg tggtccgacg ccgcctcccg
     5281 cttcggcctc
//
LOCUS       DASWGA010000185         4480 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1665646, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000185 DASWGA010000000
VERSION     DASWGA010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4480
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1665646"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..774
                     /gene="argC"
                     /locus_tag="VF991_04485"
     CDS             <1..774
                     /gene="argC"
                     /locus_tag="VF991_04485"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:TIGR01851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEX9555728.1"
                     /translation="AVKELMAALGDADTCVIDASTAHRVADGWVYGFPELNKAHRAKL
                     LASKRISNPGCYPTGAIAILRPLVDAGIVRPDSTPAVFGVSGYTGGGKELIEVHEKTP
                     HVEPFGLYGVELTHKHVPEMKKYSNLLHTPLFVPSVGHYAQGMLIMVPITRDIVARKV
                     KAADVHKVLADHYAGETFVPVRPLADRQWLERDRFLRADRLIDTNSMELAVYGNDADE
                     NILAVASLDNLGKGASGAAVQVINLKTGVDETTGLAVAA"
     gene            962..2002
                     /locus_tag="VF991_04490"
     CDS             962..2002
                     /locus_tag="VF991_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9555729.1"
                     /translation="MTVRRRALALAAMSFGLLATIVCAQAQPKDVVLTNVSYDPTREL
                     YRALNDAFAKEWQASTGQKVTIRTSHGGSGRQARAVIDGLEADVVTLALAGDIDAIAR
                     ESKRLPENWQSRLPHNASPYTSTVVFVVRKGNPKAIKDWPDLAKDGVSVVTPNPKTSG
                     GARWNYLAAWAYELDRRPGDQAAARKLVEAIYRNVPVLDSGARGATTTFAQRAVGDVL
                     ISWENEAFLILRGFGNDKFDIVVPPFSILAEPPVALVDAVVDKRGTRKVAEAYLDFLF
                     TPAAQKIIAKNFYRPSKPEAADPADLARFAKLKLVTVDQGFGGWKKAQAEHFADGAAF
                     DQIYRPSGKAAR"
     gene            1999..2859
                     /gene="cysT"
                     /locus_tag="VF991_04495"
     CDS             1999..2859
                     /gene="cysT"
                     /locus_tag="VF991_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEX9555730.1"
                     /translation="MSLAVSRAWSPTLRRPSALPGFGITLGFAVSYLSLIVLLPLAVL
                     VWRAGALGLDGIWRVATTPRVLAALEVSFAIAALSALVNAVFGTIVAWVLVRYEFPGK
                     RLLDSAVDLPFALPTAVAGIALAALYAPNGWIGALFAPWGVKIAYTPAGIFIALVFIG
                     LPFVVRTVQPVLQDFDREVEEASATLGASRRQTLFRVVLPALVPALLTGVALAFARAV
                     GEYGSVIFIAGNMPFVSEIAPLLIVTRLEEFDYAGAAAIATVMLVISFAALLAINSLQ
                     ALARRKFGDA"
     gene            2852..3694
                     /gene="cysW"
                     /locus_tag="VF991_04500"
     CDS             2852..3694
                     /gene="cysW"
                     /locus_tag="VF991_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEX9555731.1"
                     /translation="MREAALSESRAVRWLLVVLAVGFLVLFLVLPLAAVFTEALRRGL
                     TPFLAAFADPDTQSAIRLTLLVAAIAVPLNLVFGLAAAWAVAKFEFPGKSLLLSLIDL
                     PFSVSPVVSGLVYVLLFGAKGVLGPLVDDWDFKIIFAVPGIVLATIFVTFPFIAREVI
                     PLMQEQGTAEEEAALTLGASGLRTFLTVTLPNVRWALLYGVLLCNARAMGEFGAVSVV
                     SGHIRGLTNTMPLQVEILYNEYDFVAAFAVAALLAGLALVTLAAKSFLEWRHGDALSP
                     ARRY"
     gene            3729..>4480
                     /gene="cysA"
                     /locus_tag="VF991_04505"
     CDS             3729..>4480
                     /gene="cysA"
                     /locus_tag="VF991_04505"
                     /EC_number="7.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter ATP-binding protein"
                     /protein_id="HEX9555732.1"
                     /translation="MALAIRAEGLTMSIGRTAAVADLDLDVRPGELLALLGPSGSGKT
                     TLLRLVAGLEVPTAGRLLFGEEDATRLSVRERRVGFVFQNYALFKHLTVAENVAYGLR
                     VKPRRLRPSKAEIRRRVDDLLELVQLGGLGKRYPAQLSGGERQRVALARALAVEPRVL
                     LLDEPLGALDAQVRRDLRRWLREIHDRTGHTTLFVTHDQEEALELADRVAILNQGRIE
                     QVGTPDEILDRPATAFVAGFVGGSVRLPVDVAG"
BASE COUNT          627 a         1567 c         1482 g          804 t
ORIGIN      
        1 gcggtgaagg agctgatggc ggcgctcggt gatgccgaca cctgcgtgat cgacgccagc
       61 accgcgcacc gtgtcgccga cggttgggtc tacggcttcc ccgagctcaa caaggcgcac
      121 cgcgccaagc tgctcgcctc caagcgcatc agcaatcccg gctgctatcc gaccggcgcc
      181 atcgccatcc tgcggccgct ggtcgatgcc ggcatcgtgc ggccggattc gacgcccgcc
      241 gtgttcggcg tctcgggcta taccggcggc ggcaaggagc tgatcgaggt ccatgagaag
      301 accccgcacg tcgagccgtt cggactctat ggcgtcgagc tcacgcacaa gcacgtgccg
      361 gagatgaaga agtattccaa tctcctccac acgccgttgt tcgtgccgtc ggtcggccat
      421 tacgcccagg gcatgctgat catggtgccg atcacgcgcg acatcgtggc ccgcaaggtg
      481 aaggccgccg acgtccacaa ggtgctggcc gaccactatg ccggcgagac cttcgtgccg
      541 gtgcggccgc tggccgaccg ccagtggctg gagcgcgacc gcttcctgcg cgccgaccgg
      601 ctgatcgaca ccaactccat ggagctcgcc gtctacggca acgacgccga cgagaacatc
      661 ctggccgtgg cctcgctcga caatctcggc aagggcgcct cgggcgcggc ggtgcaggtc
      721 atcaacctca agaccggcgt cgacgagacg acggggctcg ccgtggcggc ttagctgttc
      781 ggcagttctc gccacccttc gacaatccga gccgatcgcg ccgcgggaca atctttcacc
      841 gcggcgcgaa tgtagatttt ggctttcttc cgagcggtcg aacttcggca accaccctta
      901 ttgtacccgg acgagaggcg agccatttca agggagccgg atttgatgga gagcggccgt
      961 catgaccgtc cgtcgacgtg ctttagccct cgccgccatg agcttcggcc tcctggcgac
     1021 gatcgtttgc gcgcaggccc agccgaagga cgtcgtgctg accaacgtgt cgtacgaccc
     1081 gacccgcgag ctctaccgtg ccctcaatga cgcctttgcc aaggagtggc aggccagcac
     1141 cggccagaag gtcacgattc gcacctccca tggcggctcc ggccgccagg cgcgggcggt
     1201 gatcgatggg ctggaagccg acgtcgtcac cctggcgctg gccggcgaca tcgacgccat
     1261 tgcccgcgag tccaagcgcc tgccggagaa ttggcaatcg cgcctgcccc acaacgcctc
     1321 accctatacc tcgacggtcg tgttcgtggt gcgcaagggc aatcccaaag caatcaagga
     1381 ttggccggac ctcgccaagg acggcgtttc ggtcgtcacg cccaatccca agacgtcggg
     1441 cggcgcgcgt tggaactacc tcgccgcctg ggcctatgag ctcgatcgcc gtccgggaga
     1501 ccaggcggcc gcccgcaagc tcgtcgaggc gatctaccgg aacgtgccgg tgctcgattc
     1561 gggcgcgcgc ggggcgacca cgaccttcgc ccagcgcgcg gtcggcgatg tcctcatctc
     1621 ctgggagaac gaggccttct tgatcctgcg gggattcggc aacgacaagt tcgacatcgt
     1681 cgtgccgccg ttctcgatcc tggccgagcc gccggtggcg ctggtcgatg ccgtggtcga
     1741 caagcgcggc acgcgcaagg tggccgaggc ctatcttgat ttcctgttca cgccggcggc
     1801 acagaagatc atcgccaaaa acttctatcg gccgagcaag cccgaggctg ccgatccggc
     1861 cgacctcgcc cggttcgcca agctgaagct ggtcacggtc gaccagggct tcggtggctg
     1921 gaagaaggcc caggccgagc atttcgccga cggcgcggcc ttcgaccaga tctaccggcc
     1981 gtccggcaag gcggcgcgat gagcctcgcc gtctcgcgcg cctggagccc gacgctccgc
     2041 agaccgagcg ccttgcccgg cttcggcatc acgctgggct ttgccgtgag ctacctctcg
     2101 ctgatcgtac tgctcccgct cgccgtgctg gtgtggcggg cgggcgcgct gggcctcgac
     2161 ggcatctggc gggtggcgac cacgccgcgc gtgctggccg ccctcgaagt gagcttcgcg
     2221 atcgccgcgt tgtctgccct ggtgaacgca gtgttcggca ccatcgtggc ctgggtgctg
     2281 gtgcgctacg aatttcccgg gaaacgcctt ctcgattcgg ccgtcgacct gccattcgcc
     2341 ctgccgaccg cggtggccgg catcgcgctc gccgcgctct atgcgccgaa tggctggatc
     2401 ggcgcgctgt tcgcgccgtg gggcgtcaag atcgcctaca ccccggccgg cattttcatc
     2461 gccctggtgt tcatcggcct gcccttcgtg gtgcgcaccg tgcagccggt gctgcaggat
     2521 ttcgaccgcg aggtcgagga ggcgtcggcg acgctcggcg ccagccgccg ccagacgctg
     2581 tttcgcgtcg tgctgccggc gctggtgccg gcgttgctga ccggcgtggc gctggccttc
     2641 gcgcgcgccg tcggcgagta tggctcggtg atcttcatcg ccggcaacat gccgttcgtt
     2701 tccgagatcg cgccgcttct gatcgtgacc cgcctggagg agttcgacta tgccggcgca
     2761 gccgccatcg ccacggtgat gctggtgatc tccttcgccg cgcttttagc catcaactcc
     2821 cttcaggcgc tcgcgcgccg gaaattcggc gatgcgtgaa gcggcgctca gcgaaagccg
     2881 ggcggtgcgc tggctgctgg tggtgttggc cgtgggcttc ctcgtgctgt tcctggtgct
     2941 gccgcttgcc gccgtgttca ccgaggcgct gcgccgcggg ctgacaccgt ttctcgccgc
     3001 cttcgccgat cccgacaccc agtcggcgat tcgtctcacc ttgctggttg ccgcgatcgc
     3061 cgtgccgctc aacctggtgt tcggcctcgc ggccgcctgg gccgtcgcca agttcgagtt
     3121 tcccggcaag agccttttgc tcagcctgat cgacctgcct ttctcggtgt cgccggtcgt
     3181 atcgggcctg gtctatgtgc tgctgttcgg cgccaagggc gtgctgggcc cgctggtcga
     3241 cgattgggac ttcaagatca ttttcgccgt gcccggcatc gtgctggcga cgatcttcgt
     3301 caccttcccc ttcatcgccc gcgaggtcat cccgctgatg caggagcagg gcacggccga
     3361 ggaagaagcc gccctcacgc tgggcgcttc cggcctgcgt accttcctga ccgtgacctt
     3421 gcccaacgtg cgctgggcgc tgttgtacgg cgtgctgctc tgcaacgcgc gcgccatggg
     3481 agaattcggc gcggtgtcgg tcgtgtccgg ccacattcgc gggctcacca acaccatgcc
     3541 gctgcaggtg gagatcctct acaatgagta cgacttcgtc gccgcgttcg ccgtcgccgc
     3601 ccttctcgca ggactcgccc ttgtcaccct ggccgccaag tcgttcctcg aatggcgcca
     3661 cggagacgca ctctcgcccg cccggcgcta ctgaattggc cggcccgcag tcggaggcaa
     3721 gcccaggcat ggcattggcg atccgggccg aagggctgac catgtccatt ggccgcaccg
     3781 cggccgtcgc cgacctcgat ctcgacgtgc ggccgggcga attgctggca ttgctcggtc
     3841 cctccgggtc gggcaagacc acgcttctgc gcctggtcgc ggggctggag gtcccgactg
     3901 ccggccgcct cctgttcggc gaggaggatg ccacgcgcct gtcggtgcgc gagcgccggg
     3961 tcggcttcgt gttccagaac tatgcgctgt tcaagcatct tacggtcgcc gagaacgtgg
     4021 cctatggcct gcgcgtgaaa ccgcgccggc tgcggccgtc gaaggccgag attcgccgcc
     4081 gcgtcgacga tctcctggag ctggtgcagc tcggcggctt gggcaaacgc tacccggcgc
     4141 agctctcggg cggcgagcgc cagcgggtgg cgctggcgcg cgcgctggcc gtcgagccgc
     4201 gcgtgctgct gctcgacgag ccgctcggcg cgctcgacgc ccaggtgcgg cgcgacctcc
     4261 ggcgctggct gcgcgagatc cacgaccgca ccggccacac gaccctgttc gtgacccacg
     4321 accaggagga ggcgctggag ctcgccgacc gcgtcgccat cctcaaccaa ggccgcatcg
     4381 aacaggtcgg cacgcccgac gagatcctcg atcgtccggc gacggccttt gtcgcgggct
     4441 ttgtcggcgg gtcggtgcgc ttgccggtcg atgtcgcggg
//
LOCUS       DASWGA010000186         2649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1414619, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000186 DASWGA010000000
VERSION     DASWGA010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1414619"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..541)
                     /locus_tag="VF991_04510"
     CDS             complement(<1..541)
                     /locus_tag="VF991_04510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555733.1"
                     /translation="MAFDISYAVQSLLEARRSGIQVAPPFALPNRDAVYAIQDGVATA
                     TGPVAGWKVGARTPTAEPNPALLLAGALVKSPACFDGKAMHMIGVEIEISFHIVRDIA
                     ARDKPVAREEALAAVGDAFVGMEVVDTRLANFQQLDPEWLLADNQMNHALVIGDSVPN
                     WKSLDWADLQVRLTIDGKVE"
     gene            578..1768
                     /locus_tag="VF991_04515"
     CDS             578..1768
                     /locus_tag="VF991_04515"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9555734.1"
                     /translation="MPYASGRVIHDADAHIMEVPGFLEEHLEAKYRAQVTDAVLFPDD
                     RRRGLHRLRPEAHKTGANNTIDFDESQIMLRKNWDALGSYAKQDRPRCLDLLGFSSQL
                     MFTTALLNFSSVLEGKGDVDLIYAVARAHTRHMVDFCSVDKRLLPTGYVPLVDFERTA
                     KAARQAVELGVKALVIPSRCPDNHSPSHIGFDPLWAAAQEAGLPIVFHVGGGGKLLED
                     AYFVNGLPPVPDFHGGDDNFKSIDYMAIAYPPMKALTALIVDRVLDRFPRLKFGVIEQ
                     GASWVPGWMRNMDSAHTAFYKNEERLQKMSLKPSEFVARQVRVTPYPHEDAGWIIANS
                     GDEVCLFSSDYPHVEGGRNPIKRFEASMQAAGTNERQKQRFYCDNFVDLMGAGLAPEL
                     RAAA"
     gene            1765..2595
                     /locus_tag="VF991_04520"
     CDS             1765..2595
                     /locus_tag="VF991_04520"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF027439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX9555735.1"
                     /translation="MTYTTLLTERTGAVLKITTNRPEVLNAQSRILLVELDDAFQRAV
                     DDDAVRVIILAGAGKHFSAGHDLGSPQEMADQKETPLEPGFKGEYRRLWERFFENTMR
                     WRDLPKPTIAQVQGYCIMGGMMIASACDIIIASEDAQFADRAVKWGGAHVQYFSMPWD
                     FGPRKTKEYLFTGDFISAAQAEKAGLVNRVVAREKLEDETMALAQRIAERDPYALKLA
                     KASVNQTQDAQGWRQAMENAFKNYMLTIPHRIEMGTYGPKAREKAPKDRFAVLNKKTV
                     "
BASE COUNT          491 a          886 c          832 g          440 t
ORIGIN      
        1 cttcgacctt gccgtcgatc gtgagtctga cctgcaggtc ggcccagtcg agcgacttcc
       61 agttcggcac gctgtcgccg atcaccagcg cgtggttcat ctggttgtcg gccagcagcc
      121 attcggggtc gagctgctga aagttggcca gccgcgtatc caccacctcc atgccgacga
      181 aggcgtcgcc cacggcggcg agcgcctcct cgcgggccac gggcttatcg cgcgccgcga
      241 tgtcgcgcac gatgtggaag gagatctcga tctcgacgcc gatcatgtgc atcgccttgc
      301 cgtcgaagca cgccggcgac ttcaccagcg cgccggccag cagcagcgcc ggattgggct
      361 cggcggtggg cgtgcgggcg cccaccttcc agccggcgac ggggccggtg gcggtcgcca
      421 cgccatcctg gatggcatag accgcatcgc ggttcggcag cgcgaaaggc ggcgccacct
      481 ggatgccgga tcgccgcgcc tccaagaggc tctgcaccgc gtaggaaatg tcgaaggcca
      541 tgctaatctc atgcaaagat caagaaccgg agggacaatg ccctacgcca gcggccgcgt
      601 cattcacgac gccgacgcgc acatcatgga agtgccgggc ttcctcgagg agcatctcga
      661 ggcgaagtac cgcgcccaag tgacagacgc cgtgctgttc ccggacgatc gccgccgcgg
      721 cctgcaccgg ctgcgcccgg aggcccacaa gaccggtgcg aacaacacca tcgacttcga
      781 cgaatcgcag atcatgctgc ggaagaactg ggatgcgctc ggctcctacg ccaagcagga
      841 ccgcccgcgc tgcctcgatc ttttaggctt ttccagccag ctcatgttca ccacggcgct
      901 gctcaatttt tcctccgtgc tggaaggcaa aggcgacgtc gatctgatct atgcggtggc
      961 gcgcgctcat acccgccaca tggtcgactt ctgttccgtc gacaagcgcc tgttgccgac
     1021 cggctacgtg ccgctggtcg atttcgaacg cacggccaag gcggcgcgcc aagcggtcga
     1081 gctcggcgtc aaggcgctgg tgatcccgtc gcgctgcccg gacaaccatt cgcccagcca
     1141 catcggcttc gatccgctgt gggccgccgc gcaggaagcc ggcctgccga tcgtgttcca
     1201 tgtcggcggc ggcgggaaac ttttggaaga cgcctacttt gtcaacggcc tgccgccggt
     1261 gccggacttt catggcggcg acgacaattt caagtcgatc gactacatgg cgattgccta
     1321 tccgccgatg aaggcgctga ccgcgctgat cgtcgatcgc gtgctcgacc gcttcccgcg
     1381 gctaaaattc ggcgtcatcg agcagggcgc ctcgtgggtg ccgggctgga tgcgcaacat
     1441 ggattcagcg cacacagcct tctacaagaa cgaggagcga ctgcagaaga tgtcgctgaa
     1501 gccttcggag ttcgtggccc gccaggtccg cgtcacgccc tacccgcacg aggatgccgg
     1561 ctggatcatc gccaactcgg gcgacgaggt gtgcctcttc tcgtcggact atccgcacgt
     1621 cgaaggtggc cgcaatccca tcaagcgctt cgaggcctcg atgcaggcgg ccggcaccaa
     1681 cgaacgccag aagcagcgct tctattgcga caatttcgtc gatctcatgg gcgccggcct
     1741 ggcgcccgaa ttgcgagccg cggcatgact tacacgaccc tgcttaccga acgcaccggc
     1801 gccgtcctca agatcacgac caatcgtccc gaggtgctga acgcgcagag ccgcattctg
     1861 ctcgtcgaac tcgacgacgc ctttcaacgc gccgtcgacg acgacgctgt ccgggtcatc
     1921 atcctggccg gggccggcaa gcatttctcg gccgggcacg acctcggcag cccgcaggaa
     1981 atggcggacc agaaggagac gccgctcgag cccggcttca agggcgaata tcgccggctg
     2041 tgggagcgtt tcttcgagaa caccatgcgc tggcgcgacc tgcccaagcc caccatcgcc
     2101 caggtccagg gctactgcat catgggcggc atgatgatcg cctcggcctg cgacatcatc
     2161 attgccagtg aggacgcgca gttcgccgac cgcgccgtga agtggggcgg cgcgcatgtg
     2221 cagtatttct cgatgccgtg ggatttcggc ccacgcaaga ccaaggaata tctcttcacc
     2281 ggggacttca tcagcgccgc ccaggccgag aaggccggct tggtcaaccg cgtcgtcgcg
     2341 cgggaaaaac tcgaggacga gacgatggcg ctggcccagc ggatcgccga gcgcgacccc
     2401 tatgcgctga agcttgccaa ggcgtcggtc aaccagaccc aggacgcgca gggctggcgc
     2461 caggcgatgg agaacgcctt caagaactac atgctgacca ttccccaccg catcgagatg
     2521 ggcacctacg ggcccaaggc ccgcgagaag gcgccgaagg accgattcgc ggtgttgaac
     2581 aagaagactg tgtaatcctg agcgcagcga aggatctcat ggccttggca agcggcgatg
     2641 aggtccttc
//
LOCUS       DASWGA010000187         5386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_279078, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000187 DASWGA010000000
VERSION     DASWGA010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5386
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279078"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VF991_04525"
     CDS             complement(<1..425)
                     /locus_tag="VF991_04525"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEX9555736.1"
                     /translation="MTALCLPALPVLEGSARAGDKSVAAQRKGSGLPIPRFASLRSDE
                     VNVRTGPGTRYPVDWVFKRKSMPVEIVAEYENWRKIRDWQGASGWVHQSLLTGKRSFI
                     IPSKAASLHKTPAAAAEVVAKLEPEVMGEIRSCAGDWCRV"
     gene            629..1624
                     /locus_tag="VF991_04530"
     CDS             629..1624
                     /locus_tag="VF991_04530"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HEX9555737.1"
                     /translation="MPPNPKKKPLVIVTRKLPDAIETRLMELFDTRLNSDDKPLSSPQ
                     LVEAVKTADVLVPTVTDRIDSRVLSQAGPRLKLIASFGTGVDHIDLDTARQRGITVTN
                     TPGVLTEDTADMSMALVLATARRMGEGERIVRAGKWTGWSPTAMLGARLLGKRMGIVG
                     MGRIGQALARRARGFGLAIHYHNRKRLHGDIERELEATYWESLDQMLARMDIVSVNCP
                     HTPATFHLLSARRLKLMKPTAIIVNTARGEVIDENAMVRMLKAGELAGVGLDVYEHEP
                     QVNPKLLELDNVVLLPHMGSATLEGRIEMGEKVLINIKTFADGHKPPDRVLATMF"
     gene            complement(1725..2591)
                     /locus_tag="VF991_04535"
     CDS             complement(1725..2591)
                     /locus_tag="VF991_04535"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhjD/YihY/BrkB family envelope integrity
                     protein"
                     /protein_id="HEX9555738.1"
                     /translation="MIETLWRIVYSAATGFFTNRLSTSAAAMAFYTMFALGPIMIFSI
                     AIAEPFVGRLMAQQAIFDALSTVVAPDQLQGIRRFASQDLFRGGGVAAVIGAVVLLYT
                     GTRVFVELDDGINAIWGNRALTMHPVLASLQSRLLALLLMVVLGVLLIAVILASVLTS
                     VYAGVLAAFPVLGVWIGPAISGSVHYGLLSAFFTLIYKWLPTGGVPWKYALIGGLVNA
                     LLFAAGNRALVYYFEVTQLTSAFGATAGFAAIMVWMYWTSLTILIGAQVGRSTRDVLI
                     EDRRREMVEGDL"
     gene            complement(2594..4012)
                     /locus_tag="VF991_04540"
     CDS             complement(2594..4012)
                     /locus_tag="VF991_04540"
                     /inference="COORDINATES: protein motif:HMM:NF039580.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEX9555739.1"
                     /translation="MGEPVTVPLWLFAAIAVFALWSLLDRLLIPSGRWFVRRRLNRLI
                     DRVNLRLAVEIKPFQLTKRQVLIDRLVYDPQVVAAANDYARANNLPREVAMGEVQRYA
                     REIVPTFNAYIYFRVGYSIARAVARFLYRVRLGFADERTMAGVPPNTTVVFVMNHRSN
                     MDYVLVAFLAAERTALSYAVGEWARIWPLQQLIRSMGAYFVRRNSNNPIYRRVLERYV
                     HMATEAGVAQAMYPEGGLSRDGRLREPKLGLFDYMLKSFDPKGTHDIVFVPVALNYDR
                     VLEDRTLLRSLDREAPRRGALFATRTALAFWFGQLGLMLRGRWFRFGYACVNFGGLIS
                     ARGWLADHAGPVGGDLRGLDKERRFEIVGRLAHDVMGEIARLVPVLPVSLLATVLLEA
                     DGPLDELALKVRASDLMAHFEGRGAKLYLPRGDRDYAFHVGLRMLALRRLIEESGGGL
                     FSAAATERPLLAYYANAIAHLR"
     gene            complement(4039..4425)
                     /locus_tag="VF991_04545"
     CDS             complement(4039..4425)
                     /locus_tag="VF991_04545"
                     /inference="COORDINATES: protein motif:HMM:NF013304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEX9555740.1"
                     /translation="MPVFFVCAGLLGLLAVVLTVNVGRVRGQKKINLGDGGDPEMLAA
                     IRAHANLIEFAPLCLLLIYMASDFYGFWTTAVLSIVLLVARVLHAGGMLGVIPQGRFL
                     GASGTTLVLAVVAILLVIAGFTLKQY"
     gene            4500..5162
                     /gene="msrA"
                     /locus_tag="VF991_04550"
     CDS             4500..5162
                     /gene="msrA"
                     /locus_tag="VF991_04550"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX9555741.1"
                     /translation="MWQILRKKTEMPSADRALPGRSAPAFSVPAKHFVNGNRIQPPFP
                     AGLENAMFSMGCFWGAERKFWEAPGVYATAVGYAAGLTPNPTYEEVCSGHTGHNEVVM
                     VWFDPSKISYEALLRVFWENHDPTQGMRQGNDVGTQYRSGIYAFSAHQKQKAEASRAV
                     FQRELAKNKLGAITTEIVDAPAFYYAEDYHQQYLAKNPAGYCGLGGTGVSCPIGVGVA
                     AE"
BASE COUNT         1023 a         1753 c         1799 g          811 t
ORIGIN      
        1 acccggcacc aatcgccggc gcaggaccgg atttcgccca tgacctcggg ctccagcttg
       61 gccacgacct ccgcggcggc ggcgggcgtc ttgtgcaggc tggctgcctt cgacgggatg
      121 atgaaactgc gcttgccggt cagcaggctt tgatggaccc atccgctcgc gccctgccaa
      181 tcgcggattt tgcgccagtt ttcgtattcg gcgacgattt cgaccggcat gcttttgcgc
      241 ttgaagaccc agtcgaccgg ataacgggtg ccggggccgg tgcggacatt gacctcgtcg
      301 gatctgagcg aggcaaagcg cggaatgggc aggcccgacc cctttcgctg cgcggcaacc
      361 gacttgtcgc cggcacgcgc gctgccttcc aggacaggca gtgccggcag gcaaagggcc
      421 gtcaaagcgg cgaagattac ccaaagcagg caggatggtc tgattcccat caagccttgt
      481 ataacccaaa tcttcaaatt gatcgacaag tacttgataa aacgcgcttt tcggtcgcgt
      541 tggtcattag cctcccttgc tggacaaggc gctcggggaa ttgctaatcg ggctcatccc
      601 tcttcgcgcc agccggtccc gatcgcccat gccgcccaat cccaagaaga agccgctggt
      661 gatcgtcacc cgaaagctgc ccgatgccat cgaaacgcgg ctgatggaat tgttcgacac
      721 gcggctcaac tccgacgaca agccgctcag ttcgccgcaa ctggtggagg cggtgaagac
      781 agccgacgtg ctggtgccca ccgtgacgga ccgcatcgac agccgggtgc tgtcgcaggc
      841 cgggccacgc ctgaagctga ttgcctcgtt cggcaccggc gtcgatcaca tcgacctcga
      901 cacggcccgc cagcgcggca tcaccgtcac caacacgccg ggcgtgctga ccgaagatac
      961 cgccgacatg tcgatggcgc tggtgctggc gacggcgcgg cgcatgggcg agggcgagcg
     1021 gatcgtgcgc gccggcaagt ggaccggctg gagcccgacc gcgatgctgg gcgcgcgtct
     1081 tctgggcaag cgcatgggca tcgtcggcat gggccgcatc ggccaggcgc tggcgcgccg
     1141 cgcgcgcggc ttcggactcg ccatccacta ccacaaccgc aagcgtctcc atggcgacat
     1201 cgagcgcgag ctcgaggcga cctactggga gagcctcgac cagatgctgg cgcgcatgga
     1261 catcgtctcg gtgaactgcc cgcatacgcc ggcgaccttc catctgttgt cggcgcggcg
     1321 tctgaagctg atgaagccca cggccatcat cgtcaacacc gcgcgcggcg aggtgatcga
     1381 cgaaaacgcg atggtgcgca tgctgaaggc aggcgagctg gccggcgtcg gcctcgacgt
     1441 ctacgagcac gagccgcagg tcaatcccaa gctgctcgaa ctcgacaatg tggtgctgtt
     1501 gccgcacatg ggctcggcca cgctcgaggg ccgaatcgag atgggcgaga aggtgttgat
     1561 caacatcaag accttcgccg acggccacaa gccgcccgat cgcgtgctgg cgacgatgtt
     1621 ttaagcgcgt tcatacgcgc tggcgggcgg cagcgccttc acagcggctt ggttacaagc
     1681 cgcgaaggcg cgagagcccg cgccgtgcag aaaagacaag accgctacaa atcgccctcc
     1741 accatctcgc ggcggcgatc ttcgatcagc acgtcgcggg tcgagcgtcc gacctgggcg
     1801 ccgatcagga tggtgagcga cgtccagtac atccagacca tgatggcggc aaagcccgcg
     1861 gtggcgccga acgccgaggt gagctgcgtc acctcgaaat agtagacgag ggcgcggttg
     1921 ccggcggcaa acagcagggc gttcaccaag ccgccgatca atgcatattt ccatggcacg
     1981 ccgccggtcg gcagccattt gtagatcagg gtgaagaagg cggacagaag tccgtaatgc
     2041 accgatcccg atatggccgg cccgatccag acgccgagga cagggaaagc cgcgagcacg
     2101 ccggcataga ccgaggtcag cacgctcgcc aggatgacgg cgatcagcag gacacccagc
     2161 accaccatca gcagcagggc gagcagtcgc gactgcaggc tggccagcac cggatgcatc
     2221 gtaagcgcgc ggttgcccca gatcgcgttg atgccgtcgt ccagttcgac gaagacgcgg
     2281 gtcccggtat agagcagcac cacggcgccg atgacggcgg cgacgccgcc acccctgaac
     2341 aggtcctgtg aggcgaaacg gcggataccc tggagctggt ccggcgccac gacggtgctc
     2401 agcgcatcga agatcgcctg ctgggccatc aagcggccga cgaacggctc ggcgatggcg
     2461 atgctgaaga tcatgatcgg gcccagcgcg aacatggtgt agaaggccat cgccgccgcc
     2521 gaggtcgaca gacggttggt gaagaagccg gtggcggccg agtagacgat gcgccagagc
     2581 gtttcgatca tgatcagcgc agatgggcga tggcgttggc gtaatatgcc agcaagggcc
     2641 gttcggttgc cgcggccgag aacaaccccc cgccgctctc ctcgatcagg cggcgcagcg
     2701 ccagcatgcg caggccgaca tggaaggcat agtcgcgatc gccgcgcggc aggtagagct
     2761 tggcgccgcg gccctcgaaa tgcgccatca aatcggacgc ccgcaccttg agggccagct
     2821 cgtcgagcgg gccgtcggct tcgagcagga ccgtggcgag cagcgacacc ggcaggaccg
     2881 gcacgagccg ggcgatctcg cccatcacgt cgtgcgccag ccggccgacg atctcgaacc
     2941 gccgttcctt gtcgaggccg cgcaggtcgc cgccgaccgg cccggcatgg tcggccagcc
     3001 agccgcgcgc cgagatcagg ccgccgaaat tgacgcaggc atagccgaag cggaaccagc
     3061 ggccgcgcag catcaggccg agctggccga accagaaggc gagcgcggtg cgggtcgcga
     3121 acaaggcacc gcgtcgcggc gcctcgcggt cgagcgaacg cagcagcgtg cgatcctcca
     3181 gcacgcggtc gtagttcagc gccaccggca cgaagacgat gtcgtgcgtt cccttggggt
     3241 cgaacgattt cagcatgtag tcgaacaggc cgagcttggg ttcgcgcagc cggccgtcgc
     3301 gcgacagccc gccctcggga tacatcgcct gggcgacgcc cgcctcggtc gccatgtgga
     3361 cgtagcgctc caggacgcgg cgatagatcg gattgttgga attgcggcgc acgaaatagg
     3421 cgcccatcga gcggatgagc tgctgcaacg gccagatgcg cgcccattcg ccgacggcgt
     3481 aggagagcgc ggtgcgctcg gcggcgagga aggcgaccag cacgtagtcc atgttgctgc
     3541 gatggttcat gacgaacacc acggtggtgt tgggcggcac gccggccatc gtgcgctcgt
     3601 cggcgaagcc cagccgcacg cgataaagaa agcgcgcgac ggcgcgggcg atcgaatagc
     3661 ccacccggaa atagatgtag gcgttgaagg tcggcacgat ttcgcgcgcg tagcgctgga
     3721 cctcgcccat cgccacctcg cgcggcaggt tgttggcgcg ggcatagtcg ttggcggcgg
     3781 cgaccacctg cgggtcgtag accaggcggt cgatcagcac ctggcgcttg gtgagctgga
     3841 agggctttat ctcgacggcg agcctgaggt tgacccggtc gatcagccgg ttgagccgcc
     3901 gccgcacgaa ccagcggccg ctcgggatca gcagccggtc gagcagggac catagcgcga
     3961 agacggcaat cgccgcgaac aaccagagcg gaacggtgac cggctcgccc atcgtccgca
     4021 ctgcctgccg tgcgcgcctc agtactgctt gagggtgaag cctgcgatga cgagcaggat
     4081 cgcgacgacc gcgagtacca atgtcgtgcc gctggcgccc aggaagcggc cctgcgggat
     4141 gacgccgagc atgccgccgg cgtgcagcac gcgcgcgacc agaagcacga tcgacagaac
     4201 ggcggtggtc cagaagccgt agaagtcgct cgccatgtag atcaacagca ggcagagcgg
     4261 cgcgaactcg atcaaattcg cgtgcgcgcg gatggccgcc agcatctcgg gatcgccgcc
     4321 gtcgcccaga ttgatcttct tctgtccccg cacgcggccg acattcaccg tcaggacgac
     4381 cgccagcagc ccgagcaggc ctgcacacac gaaaaagacg ggcatccaac ggtctcccct
     4441 cgatttggcg gcattgtatg gccatattgc cgtcgggcga aagcaagtgg aggcacgcca
     4501 tgtggcagat tctgcgcaag aagaccgaga tgccatccgc cgaccgtgcg ctccccggac
     4561 ggtcggcgcc tgccttcagc gtgccggcca agcacttcgt caacggcaat cgtatccagc
     4621 cgccgttccc ggccgggctg gagaacgcga tgttcagcat gggctgcttc tggggcgccg
     4681 aacgcaagtt ctgggaagcg cccggcgtct atgccacggc cgtcggttat gccgccggcc
     4741 tgacgcccaa cccgacctac gaggaagtct gctcgggcca taccggccac aacgaggtgg
     4801 tgatggtgtg gttcgacccg agcaagatct cctacgaggc gctgctgcgg gtgttctggg
     4861 agaaccacga tcccacccaa ggcatgcgcc agggcaacga tgtcggcacg cagtaccgct
     4921 ccggcatcta cgccttctca gcccaccaga agcaaaaggc cgaggcctcg cgtgccgtct
     4981 tccagcgcga gctggcgaag aacaagctgg gcgcgatcac gacggagatc gtggacgcgc
     5041 cggcgttcta ttacgccgag gattatcacc agcagtatct cgccaagaat cccgccggct
     5101 attgcggcct gggcggcacc ggcgtcagct gcccgatcgg cgttggcgtc gcggcggagt
     5161 aattgctggg cgcgcgcgac tcctcaggcg aagtaacctt cgccttgtgt cgcgcgtctt
     5221 tgctgggatc aacgaagatc acgccacttc agcgcggagg ttactccgcg cgcagtggcg
     5281 cgcccccagc catgaatcag accgtcggag cggcggtctc gtagccgaat tcacggtcga
     5341 ggttggcgat ctcgcggcgg aatgccagcc tgagcgcgct cttgtc
//
LOCUS       DASWGA010000188         3206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2052230, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000188 DASWGA010000000
VERSION     DASWGA010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2052230"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VF991_04555"
     CDS             complement(<1..240)
                     /locus_tag="VF991_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555742.1"
                     /translation="MSQAGRALAYAFESGALAPQRAFFLRAELGPFREVDAEQSFRPE
                     YLRLKRAAWSVVPRLESGPYQLGQLLLTKHKEENFA"
     gene            complement(251..1303)
                     /locus_tag="VF991_04560"
     CDS             complement(251..1303)
                     /locus_tag="VF991_04560"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HEX9555743.1"
                     /translation="MKSYKVVEFGKPLQKVEEPTPTPQGSEVLVRITAAGVCHSDVHL
                     WEGYFDMGGGNKYSTEKTMAPPRTMGHEIVGVVEALGSDAKGAKVGDKAVVYPWIGCG
                     KCWYCQNGIEHLCPTPRALGVNKDGGYADHVVVPHAKYLYPYGNLPTELACLYACSGI
                     TAFGAVKKAAGHDAGKPILVIGAGGVGLMGVRFAKSVLGREPIVADIDENKRKLALEN
                     GAVAAVDPRDKEARKQVMELTGGTGVGAAIDFVGAEASAQFGLRALGRGGRLIIVGLF
                     GGTFSMPLPMFAFTGCQIVGSVTGSPAEMKEMMDLVTSGKVTPVPIIKRKLDEADATL
                     QELRKGLIMGRAVLVP"
     gene            1398..2564
                     /locus_tag="VF991_04565"
     CDS             1398..2564
                     /locus_tag="VF991_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555744.1"
                     /translation="MLRREILAVAALALISSGAAAQDTVKVGLILPMTGQQASTGKQI
                     DAAVKLYQARNGTTVAGKKVEVILKDDTGVADVAKRLAQELVVNDKVAFLAGFGLTPI
                     ALAVAPIATQAKVPEVVMAAGTSSITEASPFVVRTSFTLAQSAVPMAEWAVKNGIKKV
                     VTLVTDFGPGIDAEKSFSEKFKADGGTIVDSLRVPLRSPDFSPVLQKAADAKPDALFV
                     FVPSGAGAQFVKQFVERGLDKSGIKLIATGDVTDDDQLNGMGDVVIGVINTHNYSANH
                     DSAANKAYVEAFKKANGGLRPNFMSVGGYDGMHLIYEALKKTNGSTDGEKLVAAMKGM
                     AWESPRGPISIDPETRDIVQNIYVRKVDKVGGELYNVEFATIPNVKDPVKAAKK"
     gene            2702..>3206
                     /locus_tag="VF991_04570"
     CDS             2702..>3206
                     /locus_tag="VF991_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018480825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9555745.1"
                     /translation="MATILFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMAGG
                     YVTVILMDRWGVPFLACLPVAFAAAAALGFVLERTLYVHMYNRSHLDQVLFSIGLVFM
                     AVTAVDWAMGSSQQNIKLPAWLQGRRDVFGMQVGIYRSFIIVICGALAVGLQLALTHT
                     RFGSRLRA"
BASE COUNT          543 a         1047 c         1063 g          553 t
ORIGIN      
        1 ggcgaagttt tcctccttgt gcttggtcag cagcagctgg ccaagttgat aggggccgct
       61 ctcgaggcgc ggcacgaccg accaagcggc tcgcttcagg cgcagatact cgggccgaaa
      121 cgactgctcg gcgtcgacct ccctgaaagg cccgagttcg gcgcgcagga agaacgcgcg
      181 ctgtggcgcg agcgctcccg attcgaaagc gtaggcgaga gcgcgaccgg cttggctcac
      241 agccgctcag ctagggaacg aggacggcgc gtcccatgat caggcctttg cgcagctcct
      301 gcaacgtggc atcggcttcg tcgagcttgc gcttgatgat cggcaccgga gtcaccttgc
      361 ccgacgtcac gaggtccatc atctccttca tctcggcggg actgccggtg acggagccca
      421 cgatctggca gccggtgaag gcgaacatcg gcaggggcat cgagaaggtg ccgccgaaca
      481 ggccgacgat gatcagccgc ccgccgcggc ccaacgcccg caggccgaac tgggccgacg
      541 cctcggcacc gacgaaatcg atggccgcgc ccacgccggt gccgcccgtg agctccatca
      601 cctgcttgcg cgcttccttg tcgcgcggat cgacggcggc caccgcgccg ttctccagcg
      661 cgagcttgcg cttgttctcg tcgatgtcgg ccacgatcgg ctcgcggccc agcaccgact
      721 tggcgaagcg cacgcccatc agcccgacgc cgcccgcgcc gatcaccagg atcggcttgc
      781 cggcgtcgtg gcccgctgcc ttcttcaccg cgccgaaggc ggtgatgccc gagcaggcat
      841 agaggcaggc cagttccgtt ggcaggttgc cgtaggggta gagatatttg gcatgcggca
      901 cgacgacatg atcggcgtag ccgccgtcct tgttgacgcc gagcgcccgc ggtgtggggc
      961 agagatgttc aatgccgttc tggcaatacc agcacttgcc gcagccgatc cagggataga
     1021 ccaccgcctt gtcgcccacc ttcgcgccct tggcatcgga gccgagagct tcgacgacac
     1081 ccacgatctc gtggcccatg gtgcgcggcg gggccatggt cttttcggtc gagtatttgt
     1141 tgccgccgcc catgtcgaaa tagccttccc acaggtggac gtcgctgtgg cagacgccgg
     1201 cggcggtgat gcgcaccagc acctcgctgc cctgcggcgt cggggttggc tcttcgacct
     1261 tctgcaatgg cttgccgaac tcgacaacct tgtagctctt catgggcgta ctccggggct
     1321 tttgcgtcgg gagcatagag catcccgtgg ccgtttgtgc tactagttcg caacgagatt
     1381 gtttggggag gaaacaaatg ttgagacgcg aaatcctggc cgtcgccgct ctcgctctga
     1441 tctcctccgg cgcggctgcg caggacaccg tcaaggtcgg cctgatcctg ccgatgaccg
     1501 gccagcaggc ctcgaccggc aaacagatcg atgcggcggt gaagctctac caggcgcgca
     1561 acggcacgac ggttgcgggc aagaaggtcg aggtgatcct gaaggacgac accggcgtcg
     1621 ccgacgtcgc caagcgcctg gcgcaggagc tggtggtcaa cgacaaggtg gccttcctcg
     1681 cgggcttcgg tctgacgccg atcgcgcttg ccgtggcgcc gatcgccacg caggccaagg
     1741 tgccggaggt cgtcatggcg gccggcacgt cgtcgatcac cgaggcctcg ccgttcgtcg
     1801 tgcgcaccag tttcacgctg gcgcagtcgg cggtgccgat ggccgaatgg gcggtcaaga
     1861 acggcatcaa gaaggtcgtg accctggtca ccgacttcgg ccccggcatc gatgccgaga
     1921 agtcgttcag cgagaagttc aaggccgacg gcggcaccat cgtcgacagc ctgcgcgtgc
     1981 cgctgcgcag ccccgacttc tcgccggtgc tgcagaaggc ggccgacgcc aagcccgacg
     2041 cgctgttcgt cttcgtgccg tccggcgccg gcgcgcagtt cgtaaaacag ttcgtcgagc
     2101 gcggcctcga caagtcgggc atcaagctga tcgccactgg cgacgttacc gacgacgacc
     2161 agctgaacgg catgggcgac gtggtgatcg gcgtcatcaa cacccacaac tactcggcca
     2221 accacgacag cgcggccaac aaggcctatg tcgaggcctt caagaaggcc aatggcgggc
     2281 tcaggccaaa cttcatgtcg gtcggcggct atgacggcat gcatctgatc tacgaggcgt
     2341 tgaagaagac caacggctcg accgacggcg agaagctggt tgccgccatg aagggcatgg
     2401 cgtgggagag cccgcgcggg ccgatctcga tcgaccctga gacgcgcgac atcgtgcaga
     2461 acatctatgt gcgcaaggtc gataaggttg ggggcgagct ctacaacgtc gaattcgcga
     2521 ccatccccaa cgtcaaggac ccggtgaagg cggcgaagaa atagcgacgc acgccggtga
     2581 cacaaaaccg ctgtcatccc gaggccgaag gccgagggac ctttcaggcc acagcaaagg
     2641 tccctcgcta cgctcgggat gacaccgggc gctgcgtcga cgtcctgcga ggttaggcgg
     2701 catggcgacg atcctgttcg acggcgtggc ctacggcatg ctgctgttcg tgctggcctg
     2761 cgggctcgcg gtgacgctgg gcctgatgaa cttcgtcaac ctggcgcacg gcgccttcgc
     2821 catggccggc ggctatgtga cggtgatcct gatggatcgc tggggcgtgc cgttcctcgc
     2881 ttgcctgccc gtggcgttcg cggcggcggc ggcgctgggc ttcgtgctgg agcgcacgct
     2941 ctacgttcac atgtacaacc gctcccacct cgaccaggtg ctgttctcga tcggcctggt
     3001 gttcatggcg gtgaccgccg tcgactgggc gatgggatcg agccagcaga acatcaagct
     3061 gccggcctgg ctgcagggac gccgcgacgt ttttggcatg caggtcggca tctaccgctc
     3121 gttcatcatc gtgatctgcg gcgcgctggc ggtcggcctg cagcttgcgc tgacccatac
     3181 ccgcttcggc agtcggctgc gcgccg
//
LOCUS       DASWGA010000189         7677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_908334, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000189 DASWGA010000000
VERSION     DASWGA010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7677
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_908334"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1345
                     /locus_tag="VF991_04575"
     CDS             <1..1345
                     /locus_tag="VF991_04575"
                     /EC_number="1.1.1.35"
                     /inference="COORDINATES: protein motif:HMM:NF006124.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HEX9555746.1"
                     /translation="GLVAKGRLTDADLARTDANLAVAENLADLKGCHVVIEAVFESLE
                     VKQKLFGELEAVVAPDAILASNTSSIRIASIARALKHRDRVCGMHYFNPVPLMKLVEV
                     IRAADSAQWVIAAMTALGQRQTRVPVVVGDTPGFLVNLGGTAIGTEGLRIFQEGRASP
                     SQVDAVMRDTCGFRMGPFELMDLTGIDVNFPARKIIYEGFFHDRRMTPSPYHESLYAA
                     GKLGRKTGGGWYAYDAKGAKIDPGADHAVSAAPATSVVIIDTHNKKLTGLIASDGARM
                     LGADDGKSPILVAPIGKDCTTTAIELELDPKRTVAVDLTGDTGKRLTVMTAPGADAAV
                     RDAAVALLAKSGTRVTVIKDSPGFIAQRMCAMIANLGCEMAMIGIASAQDVDTAMTLG
                     LNYPRGPLALADWLGIKQCHEILVQMQAITGDDRYRPSQWLRRRAMLGMSATTPE"
     gene            1398..1979
                     /locus_tag="VF991_04580"
     CDS             1398..1979
                     /locus_tag="VF991_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555747.1"
                     /translation="MARKLTAACLVLSLCLFGRCAFAQFEGENLLVTMPSGFKVGYQD
                     ARNGVRIQELIPAGETVQHWSEMVTVQVFQNRTDLDPRKMLERIRQQWLQACRGSAPA
                     TVVDSQTNDYTVATMLLRCPMNGETGKPETTSFRAIKGRDSFYMVQSAVRFVPDQSQL
                     ERMNSYLATVSVCDTRKPQHPCPDLRGGFHYKE"
     gene            complement(2101..3441)
                     /locus_tag="VF991_04585"
     CDS             complement(2101..3441)
                     /locus_tag="VF991_04585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX9555748.1"
                     /translation="MVVQWARVRIIFSLSLPVALILLAHNLMSLISIAMVSHLGDAAV
                     AGIGVAGALFSMLMAVLFGIDTGVQALVAQRIGAGNLRLAGITLNDALAIAVAGGLLL
                     ALLGYVAGPGLFRLVVNDAAVVACGLPYLNAALPMLLFLGANFAFSAYRNGASMPRYS
                     LLAVAIQLPCNALFSYLLIFGAFGLPRLETAGAGLGATLAALVALIVHVLLASRIAPV
                     PGFLRTRPSWPGMRLILKIGLPVGIQQSLVYLGTAVYFAIVGLLGTGEVAAMNVVLTM
                     MLLSILAASGVGIAAATLVGTALGRGDPSDAMRWGWEVARLGALGILAFSLIVVVAPR
                     STLGLFIADQTTIDLAAAPLSTLALGMGVDAFGRILGFALRGAGATRLVTAVVFVLQW
                     GVQLPLAWLVGVHLGFGLTGIATSRLALFATEAAAVTIMWRNGFWNRVRLVSTP"
     gene            3491..4399
                     /locus_tag="VF991_04590"
     CDS             3491..4399
                     /locus_tag="VF991_04590"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX9555749.1"
                     /translation="MADIHINDIRKLDGSLLLVFRELSRTRRTTEAARRLGVTQSTVS
                     HALARLRDLFADPLFVRRPHGLEPTQRALELAPRIDSLIDMAGAVMTREGGFEPARSE
                     RRFRLAAPEFVTALIGGHLAQIFQREAPRASFSVDFLLGGAALETLRRGEIDMVLGQF
                     PSLPAGVAAEILYQDRFCIVARKRHPKIKGAIDKRTFAKLPNIFASSSGGTSITDATI
                     PSPSIVSTVALVPRWLTALTMVSASDAIATCPRRLAKRMAGVLGLQIIDADFAGPRFA
                     VSAVRRAGHGDAGIDWLIAAVRTAVL"
     gene            4522..5661
                     /locus_tag="VF991_04595"
     CDS             4522..5661
                     /locus_tag="VF991_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008594840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9555750.1"
                     /translation="MTALAAHYTPEHQMFRDTCRRFFDKEVVPFHMKWEEDGIVPRAL
                     WRKAGEQGLLGVTMPEEYGGAGADFLYGAILIEEQGRALASGPAFSLHNDIVVPYLLH
                     YGNEEQKKKWIPKACSGELITAIAMTEPGTGSDLQSVKTSAVMDGNHWVINGSKTFIS
                     NGQLADLVIVVAKTDAKLGAKGTSLIAVETATEGFKRGRNLEKIGMKAQDTSELFFDN
                     VRVPADNLLGGPGMGFVQLMQQLPQERLVIAIQAIAAIEAAMEHTLAYVKERKAFGKP
                     IIDFQNTRFKLAELKTKAHIARVFVDDCVARHLKGELDVATAAMAKYWTTDLQCELID
                     ECLQFHGGYGYMWEFPIARLYADARVQKIYGGTNEIMKELIGRTL"
     gene            5784..6995
                     /locus_tag="VF991_04600"
     CDS             5784..6995
                     /locus_tag="VF991_04600"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019863123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEX9555751.1"
                     /translation="MTDAFIYDAVRTPRGKGRKDGSLHEVTPVRLAVTALQAIRDRNK
                     LDTHLVDDVVLGCVMPIGEQGADIARTAAVVAGYAETVSGVQVNRFCASGLEATNMAA
                     AQVMSGQSQAVIGGGVESMSRVPMGSDGGAWPTDPAVAIPMYFVPQGISADLIATKYG
                     LSRDDVDAYAVESQKRAKAAWDKGYFKKSIVPVKDQNGIELLGHDELMRPTTTMQTLA
                     ALEPSFKMQGEMMPGFDAVALQRYPEVEKVNHVHHAGNSSGIVDGAAAILLGTKEFGE
                     KTGLKARARIRSFASIGSEPAIMLTGPAPASEKALKRAGMSAKDIDLWELNEAFAAVV
                     LRYMQILKMPHDKINVNGGAIAMGHPLGATGAMILGTLLDELERRDLSTGLATLCVGA
                     GMGTATIIERV"
     gene            7092..>7677
                     /locus_tag="VF991_04605"
     CDS             7092..>7677
                     /locus_tag="VF991_04605"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9555752.1"
                     /translation="MITYNVDGDGIATITWDMPNRTMNVLNEASMTAYAGALESALKD
                     DKVKGIILASAKADFIAGADLEMLLSVDTSDAAKLMEQFSQLQKMFRHQETGGKPIVA
                     AINGTALGGGFEICLACHYRIAAANPRAKVGQPEVKIGLLPGGGGTQRIPRLIGVMNA
                     APILLEGKDLTVDAAKGLGLIHDVVPANELLAKAK"
BASE COUNT         1490 a         2522 c         2457 g         1208 t
ORIGIN      
        1 aggcctcgtg gccaagggac ggttgaccga tgccgatctc gccaggaccg acgccaacct
       61 cgccgtggcc gagaacctcg ctgacctcaa gggttgccat gtcgtgatcg aggcggtgtt
      121 cgagagtctc gaggtgaagc agaagctgtt cggcgagctc gaagccgtgg tcgcgcccga
      181 cgccattctg gcctcgaaca cttcgtcgat ccgcatcgcc tcgatcgccc gcgcgctgaa
      241 acaccgcgat cgtgtctgcg gcatgcacta cttcaatccc gtgccgttga tgaaactcgt
      301 cgaggtgatc cgcgccgccg attcagcgca atgggtgatc gccgccatga cggcgttggg
      361 tcagcgccag acgcgcgtgc ccgtcgtcgt gggcgatacg ccgggctttt tggtcaatct
      421 tggcggcacg gcgatcggca ccgaaggcct gcgcatcttc caggagggca gggcgagccc
      481 gagccaggtc gacgccgtga tgcgcgacac ctgcggcttt cgcatggggc cgttcgagct
      541 gatggacctg accggcatcg acgtgaactt cccggcgcgc aagatcatct acgagggctt
      601 cttccacgac cggcgcatga cgcccagccc ctatcacgag agcctgtacg ccgcgggcaa
      661 gctcggccgc aagaccggcg gcggctggta cgcctacgat gccaagggcg ccaagatcga
      721 tcccggcgcc gatcacgctg tatcggccgc gccggcgacc agcgtcgtga tcatcgacac
      781 ccacaacaag aagctcaccg gcctgatcgc ttcggacggc gccaggatgc tgggcgccga
      841 cgacggtaaa agcccgatcc tggtggcgcc gatcggcaag gactgcacga cgacagcgat
      901 cgagctggag ctcgatccca agcgcaccgt cgccgtcgac ctcaccggcg ataccggcaa
      961 acgcctcacc gtcatgaccg cgcccggcgc cgatgccgcg gtgcgcgatg ccgccgtggc
     1021 gctgctcgcc aagtcgggca ccagggtgac agtgatcaag gactcgcccg gcttcatcgc
     1081 ccagcgcatg tgcgccatga tcgccaatct gggctgcgag atggcgatga tcggcattgc
     1141 ctcggcacag gacgtcgaca ctgccatgac cttgggcctc aactacccgc gcgggccgct
     1201 ggcgctcgcc gactggctgg gcatcaagca gtgccacgag atcctggtgc agatgcaggc
     1261 cattaccggc gacgaccgct accggccgag ccagtggctg cggcggcggg cgatgctggg
     1321 gatgagcgcc acgacgccgg aatgaagcgc cagggcagag ccggctgcgc ttgaagctcg
     1381 cagggggaga tatggcagtg gcgaggaaac tgacggcagc ctgccttgtc ctgtcgctgt
     1441 gtctctttgg ccgatgcgcc ttcgcgcagt tcgaaggtga aaatctgctc gtgaccatgc
     1501 catccggctt caaggtcgga taccaggatg cgcggaacgg cgtcaggatt caggaattga
     1561 ttccagccgg cgagaccgtc caacactggt ccgagatggt cacggtgcag gtatttcaga
     1621 acagaactga cctcgacccg cgcaagatgc tcgagaggat tcggcaacag tggctccagg
     1681 cctgtagagg aagcgcgccc gctaccgtcg tcgacagcca aacgaatgat tatacagttg
     1741 caacgatgct tctgcgctgt cccatgaacg gcgaaaccgg caaacccgag acgacctctt
     1801 ttcgcgccat caaaggcagg gacagcttct acatggtgca aagcgctgtc cggtttgttc
     1861 ctgatcagag ccagcttgag cggatgaaca gctatctggc gacggtgagc gtctgcgata
     1921 ccagaaagcc ccagcatccc tgccctgatt tgcgaggtgg tttccactac aaagaatagc
     1981 aagcggccac gtccggtcgt ccgccgcgcc gccagcccgg ctgacgcccg gcaatagccg
     2041 cgctcgatga cttttgcgga ggtcgcgcgg ggcaacgtgc cgcgcggcca tcgtcgacgc
     2101 ttacggcgtt gaaacaagac ggacgcgatt ccagaaaccg ttgcgccaca tgatagtgac
     2161 agcggcggct tccgtcgcaa acagggccag ccggctggtc gcgatgcccg tcaggccgaa
     2221 gccgagatgg actccaacta accaagccag tggcaattgc accccccatt gcagcacgaa
     2281 caccaccgcc gtcaccagcc gagtcgcacc ggcgccgcgc agcgcaaagc ccaggatgcg
     2341 cccgaaggca tccacgccca tgcctagagc cagcgtactg agcggcgccg cggcgaggtc
     2401 tatcgtggtc tggtcggcga tgaacaggcc gagcgtgctg cgcggcgcca cgacgacgat
     2461 caggctgaat gccaggatcc caagcgcccc gagccgcgcg acctcccaac cccagcgcat
     2521 tgcgtctgag ggatcgccgc gccctaaggc cgtacctacc agggtcgcgg cggcgatgcc
     2581 cacgcccgat gcggccagga tcgacagcag catcatggtc agcaccacgt tcatcgccgc
     2641 aacttcgccc gtgccgagca ggccgacgat tgcgaagtag accgcggtgc cgaggtacac
     2701 gagagattgc tggatgccga caggcagacc gattttcaga ataagacgca tgcccggcca
     2761 gctcggccgt gtgcggagaa agcccggcac tggcgcgatc cgcgacgcca acagcacatg
     2821 gacgatcaag gcgaccagag ccgccagggt tgcgcctagc cctgcgcccg ccgtttccag
     2881 acgcggcaat ccgaacgcgc cgaagatcag caggtagcta aagagagcat tgcacggcaa
     2941 ttgaatggca acggccagca atgagtatcg cggcatgctg gcgccgttgc gataggcgct
     3001 gaaggcgaag ttggcgccga ggaacagcag catgggcagg gccgcgttca ggtagggcag
     3061 gccgcacgcc acgacggcag cgtcgttgac aaccagacgg aagagaccgg gacctgcgac
     3121 ataccccagc aaggccagca gcagtccgcc tgcgacggcg atcgccagcg catcgttcaa
     3181 cgtgatgccg gcaagccgta ggtttccggc gccgattcgc tgcgccacca acgcctggac
     3241 gccggtatcg atcccgaaca gcaccgccat aagcatcgaa aacagcgcac cggcgacacc
     3301 gatgccggcc acggctgcat cgcctagatg gctgaccatg gcgatgctga tcaggctcat
     3361 cagattgtga gccagcagga tcagcgcgac cggcagcgac aagctgaaga tgatccggac
     3421 gcgcgcccat tggacgacca tgcataaaga tctagcggcc gacctcttgt ctggataatg
     3481 atttcagtta atggctgata ttcatataaa tgatatcagg aaactggacg gcagcctgct
     3541 cctggtattc cgcgaactgt cgcgcacacg gcggacgacc gaggccgcgc ggcggctggg
     3601 tgtcacgcaa tccaccgtca gccatgccct ggcgcgcctg cgcgatctgt ttgccgatcc
     3661 gctgttcgtg cgtcggccgc acggcctgga gccgacacag cgggcgctgg agctggcgcc
     3721 gcgcatcgac agcctgatcg acatggcagg cgccgtgatg acccgggagg gtggattcga
     3781 gccggctcgt agcgagcggc ggttccgatt ggcggcgccg gagttcgtca ccgcgctcat
     3841 cggcggccat ttggcgcaga tcttccagcg ggaagcgccg cgcgcctctt tttcggtgga
     3901 tttcctgctc ggcggagccg cgctcgagac cctgcggcgc ggcgagatcg acatggtgct
     3961 cggccagttc cccagcctgc cggcgggcgt cgcagccgag atcctgtatc aagaccgctt
     4021 ttgcattgtt gcgcggaagc gccatccgaa gatcaaaggc gctatcgaca agcggacctt
     4081 tgccaaacta cccaatatct tcgccagttc atcgggggga acgagcatca ccgacgcgac
     4141 catcccgagc ccgagcatcg tctcgacggt ggcgttggtg ccccgttggt tgacggccct
     4201 gacaatggtc tcggccagcg atgcgatcgc cacttgcccg cgccgcctcg ccaagcggat
     4261 ggcgggcgtc ctcggactgc agatcatcga cgccgacttc gccggccctc gctttgcggt
     4321 ctctgcggtg cggcgcgccg gccatggcga tgccggtatc gactggttga ttgcagcggt
     4381 gcgcactgcc gtgctttagc cagtttcaag gttgacgttt acgtaaaggt aaactacatc
     4441 cccagcgctg gcggagcagg cgctggcgga ccaaagtccc ataagaacaa gacaaaccat
     4501 cgaccgccgg aggaccgctc agtgaccgct ttggccgcgc attacacgcc cgaacaccag
     4561 atgttccgcg acacctgccg gcggttcttc gacaaggaag tcgtgccgtt tcacatgaaa
     4621 tgggaggagg acggaatcgt cccgcgcgcg ctgtggcgca aggcgggcga gcaggggctt
     4681 ttgggcgtga ccatgcccga agagtatggc ggcgccggcg ccgacttttt atacggcgcc
     4741 atcctgatcg aggagcaggg ccgcgcgctc gcctcgggtc ccgccttctc cctgcacaac
     4801 gacatcgtcg ttccctacct gctgcactac ggcaacgaag agcagaagaa gaagtggatc
     4861 cccaaggcct gctcgggcga gctcatcacc gccatcgcca tgaccgagcc cggcaccggc
     4921 tcggacctgc agtcggtcaa gaccagcgcg gtgatggacg gcaatcactg ggtgatcaac
     4981 ggttcgaaga ccttcatcag caacggccag ctcgccgacc tggtgatcgt ggtcgccaag
     5041 accgatgcca agctcggcgc caagggcacc tcgctgatcg ccgtcgagac cgcgaccgaa
     5101 ggttttaagc gcggccgcaa tctcgagaag atcggcatga aggcgcagga cacgtcggag
     5161 ctgttcttcg acaacgtgcg cgtgccggcc gacaacctgt tgggcggacc cggcatgggc
     5221 ttcgtgcaat tgatgcagca gctgccgcag gagcggctgg tcatcgccat ccaggcgatt
     5281 gccgccatcg aggcggcgat ggagcacacc ctcgcctacg tcaaggagcg caaggcgttc
     5341 ggcaagccaa tcatcgattt ccagaacacc cgcttcaagc tggccgagct caagaccaag
     5401 gcccatatcg cgcgcgtgtt cgtcgacgat tgcgtcgccc gccatctcaa gggcgaactc
     5461 gacgtcgcga ccgccgcgat ggccaagtac tggaccaccg atctgcagtg cgagcttata
     5521 gacgagtgcc tgcagttcca tggcggctac ggctacatgt gggaattccc catcgcgcgc
     5581 ctctatgccg acgcgcgcgt gcagaagatc tacggcggca ccaacgagat catgaaggaa
     5641 ctcataggac gcacgcttta accattcccg tcaccccgac cgcagcccga agggcggagt
     5701 ggaggggcct cttcatgaag aggtccctcc actcgtcgct tcgctcctcg gtcgggatga
     5761 cggagtaagt aaggagacag accatgaccg acgcattcat ctacgacgcc gtccgcaccc
     5821 cgcgcggcaa gggccgcaag gacggctccc tgcacgaagt gaccccggtg cgcctggccg
     5881 tcaccgccct gcaggcgatc cgcgaccgca acaaattgga tacccatttg gtcgacgatg
     5941 tggtgctggg ctgcgtcatg ccgatcggcg agcagggtgc cgatatcgcc cgcaccgccg
     6001 ccgtcgtggc gggctatgcc gagacggtgt cgggcgtgca ggtcaaccgc ttctgcgcct
     6061 cgggcctcga agccaccaac atggcggcgg cccaggtcat gtcgggtcag tcgcaggcag
     6121 taatcggcgg cggcgtcgaa tcgatgtcgc gggtgccgat gggctccgac ggcggcgcct
     6181 ggccgaccga ccccgcggtc gccatcccga tgtacttcgt gccgcagggc atctcggccg
     6241 accttatcgc caccaagtat ggcctcagcc gcgacgacgt cgacgcctat gccgtcgaat
     6301 cgcagaagcg cgccaaggcg gcatgggaca agggctactt caagaagtcg atcgtgccgg
     6361 tgaaggacca gaacggcatc gagctgttgg gccatgacga gctgatgcgc ccgaccacga
     6421 ccatgcagac gctggcggca cttgagccca gcttcaagat gcagggcgag atgatgccgg
     6481 gcttcgacgc ggtggcgctg cagcgctatc ccgaggtcga gaaggtcaac cacgttcacc
     6541 atgccggcaa ctcgtcgggc atcgtcgacg gcgccgccgc catcctgctc ggcaccaagg
     6601 agttcggcga gaagaccggg ctcaaggcac gggcgcgcat ccgctccttc gcctcgatcg
     6661 gctcggagcc ggcgatcatg ttgaccggac cggcgccggc ttcggagaag gcactgaagc
     6721 gcgccggcat gagcgcgaag gacatcgatc tgtgggagct gaacgaggcg ttcgccgccg
     6781 tcgtcctgcg ctacatgcag atcctaaaaa tgccgcacga caagatcaac gtgaacggcg
     6841 gcgccattgc catgggccat ccgctgggcg ccaccggcgc gatgatcctg gggaccctgc
     6901 tcgacgaatt ggagcggcgc gatctctcga cgggcctggc gacactctgc gtcggcgccg
     6961 gcatgggcac cgccaccatc atcgagcggg tctgatgctg ggagcgcgcc actccagtgg
     7021 cgcgtcttcc tggcactcga aaccgcgtga gcgccacgga gtggcgcgct cccagcaatg
     7081 aggactccac catgatcacc tacaacgtcg acggcgacgg catcgccacc atcacctggg
     7141 acatgcccaa ccgcaccatg aacgtgctga acgaggcctc gatgacggcc tatgccggcg
     7201 cgctcgagtc agcgctcaag gacgacaagg tcaaaggcat catcctcgcc tcggccaagg
     7261 ccgacttcat cgccggcgcc gacctcgaaa tgcttttgag cgtcgacacg tcggacgccg
     7321 ccaagctgat ggagcagttc agccagctgc agaagatgtt tcgccaccag gagaccggcg
     7381 gcaagccgat cgtggcggcg atcaacggca ccgccctggg cggcggcttc gagatctgtc
     7441 tcgcctgcca ctatcgcatc gccgcggcca acccgcgcgc caaggtcggc cagcccgagg
     7501 tcaagatcgg actcttgccg ggcggcggcg gcacgcagcg cattccgcgc ctgatcggcg
     7561 tgatgaatgc cgcccccatc ctgctcgaag gcaaggacct gacggtcgac gccgcgaagg
     7621 ggcttggcct gatccacgac gtcgtgccgg cgaacgagct tttggccaag gcgaagg
//
LOCUS       DASWGA010000190         2539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1666408, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000190 DASWGA010000000
VERSION     DASWGA010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2539
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1666408"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="VF991_04610"
     CDS             <1..446
                     /locus_tag="VF991_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9555753.1"
                     /translation="DVDELMELARDTDLEDGPAIRNQQVRSKIADWYVQQQGLKLTRY
                     RTLTALSKGQTPGPESSIIKIVAAPKMQDMGAFAMELMGPAGIMKEEVPHAAGFQAQW
                     IGGAGFRIAGGTDEILRNIVAERVLGLPADIRVDKDVPFNKLGKG"
     gene            543..1346
                     /locus_tag="VF991_04615"
     CDS             543..1346
                     /locus_tag="VF991_04615"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX9555754.1"
                     /translation="MNRLDGKVAFLSGAARGIGGATARLMASAGAKVAIGDVLDERGR
                     QTAKEIEAAGGQALYVSLDVTQEASWAAALDATVKKFGKLDVLVNNAGIFNGKGVEEA
                     TIDEWNNLVAVNLTGVVLGTRAALPHLKASGQRSPHGAAIVNLASVAGLVGSQLDPLY
                     SLTKGGVTLFTKSTALEFGRKGYRIRVNSIHPGVIDTDMGQQTFVMRAKALGTNDTEA
                     TRKVSTTMHPIGRLGLADDIAKGIVFLASDDAAFMTGAGLVVDGGYTAQ"
     gene            1359..>2539
                     /locus_tag="VF991_04620"
     CDS             1359..>2539
                     /locus_tag="VF991_04620"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9555755.1"
                     /translation="MKFGLLYEHQLPRPWTDESEHRLFKDALAQVELADRLGIDYIWE
                     VEHHFLEEYAHSSAPEVFLAACAARTSRIRIGHGVVLAPPGYNHPARVAERIATLDLV
                     SDGRVDWGTGESASRVELEGFGIDPDQKKAMWAEAVEQTADMMAMSPYPGFKGKFFSM
                     PVRNVVPKPLQKPHPPIWVACSRRETIHAAARAGIGALTFAFVDPAEAGKWAHEYYEI
                     IKSEQCVPIGHTVNANVAMVTGFSCHDDRDEARRRGAEGFQFFGYSLGHYYVYGHHQP
                     GVTDVWQRFEAAKDKLPSVGQGSGIGTPAELTEHLKSYQDAGVDQVVFIQQGGRNKHE
                     HICESLELFAAKVMPVLKADQAAREARKQAELAPFVAAALQRKNRAAPVNPSAVPVVS
                     A"
BASE COUNT          467 a          828 c          840 g          404 t
ORIGIN      
        1 tcgatgtcga cgagctgatg gagctggcgc gcgacaccga tctggaggat gggccggcga
       61 tccggaacca gcaggtgcgc agcaagatcg ccgactggta cgtccagcag cagggtctga
      121 agctgacgcg ctatcgcacg ctgacggcgc tctccaaagg acagacgccc ggccccgaat
      181 cctcgatcat caagatcgtg gccgccccca agatgcagga catgggcgcc ttcgccatgg
      241 agctgatggg gccggccggc atcatgaagg aggaggtgcc gcacgccgcg ggcttccagg
      301 cgcagtggat cggcggcgcc ggcttccgca tcgccggcgg caccgacgag attttgcgca
      361 atatcgtggc cgagcgcgtg ctcggcctgc cggccgacat ccgcgtcgat aaagacgtgc
      421 cgttcaacaa gttggggaag ggctgaagct gtcgtcctga gcgaagcgaa ggacctcatc
      481 gccgcttgcc acgggcatga gatccttcgc ttcgctcagg atgacatgag ggagaaccgg
      541 cgatgaatcg gctcgacggc aaggtggcct ttttgagcgg cgcggcgcgt ggcatcggcg
      601 gggcgacggc caggctcatg gcgtcggccg gcgccaaggt ggcgatcggt gatgttttgg
      661 acgagcgcgg ccggcagacg gccaaggaga tcgaggcggc gggcgggcag gcgctctacg
      721 tttcgctcga cgtcacccag gaggcgagct gggcggctgc gcttgatgcc acggtgaaga
      781 aattcggcaa gctcgacgtg ctggtgaaca atgccggcat cttcaacggc aagggcgtcg
      841 aggaagccac aatcgatgag tggaacaatc tcgtcgccgt caacctgacc ggcgtcgtgc
      901 tgggcacgcg tgccgccctg ccgcatctca aggcgagcgg ccagagaagc ccgcacggcg
      961 cggccatcgt caatctcgcc tcggtcgccg gcctggtcgg ctcgcagctt gatcccctct
     1021 attcgctgac caagggcggc gtgaccctgt tcaccaagtc gacggcgctg gaattcggcc
     1081 gcaagggtta taggatccgc gtcaactcga tccatcccgg cgtcatcgat accgacatgg
     1141 gccagcagac cttcgtcatg cgggccaagg cgctcggcac caacgacacc gaagccacgc
     1201 gcaaggtttc cacgaccatg catcccatcg gccggctggg cctggccgac gacatcgcca
     1261 agggcatcgt gttcctggcc tctgacgatg ctgccttcat gaccggcgcg ggcctggtcg
     1321 tcgatggcgg ctacacggcg caataaggag agaaggccat gaagttcgga ctcctctacg
     1381 agcaccagct accgcggccg tggacagatg agtcagagca tcggctgttc aaggacgcgc
     1441 tggcccaggt cgaattggcc gatcggctgg gcatcgatta catctgggaa gtcgagcacc
     1501 acttcctcga ggaatacgcc cactcctcgg cgccggaagt gtttttagcc gcctgcgccg
     1561 cgcgcaccag ccgcatccgc atcggccacg gcgtggtgct ggcgccgccc ggctacaatc
     1621 atcccgcccg cgtcgccgag cgcatcgcca ccctcgacct cgtctccgac gggcgggtcg
     1681 actggggcac cggcgaatcg gcctcgcggg tcgagctcga aggcttcggc atcgaccccg
     1741 accagaagaa ggcgatgtgg gccgaggcgg tcgagcagac cgccgacatg atggcaatga
     1801 gcccctatcc cggcttcaag ggcaagttct tctccatgcc ggtgcgcaac gtggtcccca
     1861 agcccttgca gaagccgcat ccgccgatct gggtggcgtg cagccggcgc gagaccatcc
     1921 atgccgccgc ccgcgccggc atcggcgcgc tcaccttcgc cttcgtcgat ccggccgaag
     1981 ccggcaagtg ggcgcatgaa tactatgaga tcatcaagag cgagcaatgc gtgccgatcg
     2041 gccatacggt gaacgccaat gtcgccatgg tgaccggctt ctcttgccac gacgatcgcg
     2101 acgaggcacg gcggcgcggc gccgaaggct tccagttctt cggctattcg ctcggccact
     2161 actacgtcta cggccaccac cagccgggcg tcaccgatgt ctggcagcgc ttcgaggcgg
     2221 ccaaggacaa gctgccttcc gtcgggcagg gcagcggtat cggcacgccg gccgaactca
     2281 ccgagcatct caagagctat caggatgccg gcgtcgatca ggtcgtgttc atccagcagg
     2341 gtggacgcaa caagcacgag cacatctgcg aatcgcttga gctcttcgcc gccaaggtca
     2401 tgccggtgct gaaggccgac caggcggcgc gtgaggcgag gaaacaggct gaactggcgc
     2461 ctttcgtcgc ggcggcattg cagcgcaaga accgtgccgc accagtcaat cccagtgccg
     2521 tgcccgtcgt ttcggccta
//
LOCUS       DASWGA010000191         1608 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_528671, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000191 DASWGA010000000
VERSION     DASWGA010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_528671"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1608
                     /locus_tag="VF991_04625"
     CDS             <1..>1608
                     /locus_tag="VF991_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX9555756.1"
                     /translation="EFLTHNMAPLMFGALVIFLLIGYPVAFSLAAIGIFFGLGGIELG
                     LLHPTLFQALPQRIWAVMSNDTLLAVPFFTFMGLILERSGMAEDLLDTIGQVFGPVRG
                     GIAYAVIFVGALLAATTGVVAASVISMGLISLPIMLRYGYDRRFASGVIAASGTLAQI
                     IPPSLVLIVMADQLGRSVGDMYEGAFLPGLTLAALYAVFVFITTILFPNYVPGLPADA
                     VGFREDNGARGLMSLAVLTAASTAVAILAMRGSDTHGADYVVLTMFIGIVFAFAVSIV
                     NWLCDKLFGFRFLSRLGQQVTFVMVPPLFLIFLVLGTIFIGVATPTEGGAMGATGALA
                     LGALKRRLSWDLVRQAAESTAKLSAFVVFILVGARVFSLTFYGVDGHRWVESFLVSLP
                     GGPVGFLVFVNLFVFVLAFFLDFFEIAFIVIPLLGPAAEHLGIDLIWFGVILGVNMQT
                     SFMHPPFGFALFYLRSVAPFKDFVDKVTGKTIPRVTTGQIYWGAVPFVCIQVIMVALV
                     IAFPNLVLSGVDRGTGIDPSKVRIEIPQ"
BASE COUNT          207 a          544 c          500 g          357 t
ORIGIN      
        1 gaattcctga cccacaacat ggcgcccctg atgttcgggg cgctggtgat cttcctgctg
       61 atcggctacc cggtcgcttt ctccctcgcc gccatcggca tctttttcgg gctgggggga
      121 atcgaactgg ggctgctgca tccgacgctc ttccaggcgc tgccgcagcg catttgggcg
      181 gtcatgtcga acgatacgct gctcgcggtg ccgttcttca ccttcatggg gctcatcctc
      241 gagcgcagcg gcatggccga ggacctgctc gacaccatcg gccaagtctt cggcccggtg
      301 cgaggcggca ttgcctacgc cgtcatcttc gtcggtgcac tgctcgcggc cacgaccggc
      361 gtcgtcgccg cgtcggtgat ctcgatgggg ctcatttcgt tgccgatcat gctgcgctac
      421 ggctacgacc ggcgcttcgc ttcgggcgtg atcgccgcgt cgggaacgct ggcacagatc
      481 atcccgccgt cgctggtgct gatcgtcatg gccgaccagc tcgggcgctc ggtcggcgac
      541 atgtacgaag gcgccttcct gcccggcctg actttggcgg cgctgtacgc ggtgttcgta
      601 ttcatcacca ccattctctt cccgaactac gtgcccgggc tgccggccga cgcggtcgga
      661 ttccgcgagg acaacggcgc gcgcgggctc atgtccctcg ccgtcctcac cgccgccagc
      721 accgcggtcg ccattctggc gatgcgcggc tccgacaccc atggcgccga ctacgtggtg
      781 ctgacgatgt tcatcggcat cgtcttcgcg ttcgcggtct cgatcgtgaa ctggctgtgc
      841 gacaagctct tcggcttccg ctttctgtcc cggctgggac agcaagtgac gtttgtgatg
      901 gtgccgccgc tgttcctgat ctttctggtg ctcggcacga tcttcatcgg cgtcgccacc
      961 ccgaccgaag gcggcgcaat gggcgccacg ggggcgctcg cgctcggcgc gctcaaacgt
     1021 cggctgagct gggatttggt gcgccaagcc gcggaatcca ccgccaagct ctccgccttc
     1081 gtggtcttca tcctggtcgg cgcgcgggta ttctcgctga ccttctacgg ggtcgacggc
     1141 catcgctggg tcgagagctt tctggtcagc ctgccgggcg gcccggtcgg cttcctggtt
     1201 ttcgtcaatc tcttcgtgtt cgtgctcgcg ttcttcctgg acttcttcga gatcgccttc
     1261 atcgtcattc cgctgctggg gccggcggcc gagcatctcg gcatcgacct gatctggttc
     1321 ggcgtgatcc tcggcgtcaa catgcagacc tcgttcatgc acccgccgtt cggtttcgcg
     1381 ctgttctatt tgcgcagcgt ggcgccgttc aaggacttcg tcgacaaggt caccggaaag
     1441 acgattcccc gcgtcaccac cgggcagatc tactggggcg ccgtgccctt cgtctgcatc
     1501 caggtcatca tggtggcgct ggtcatcgcc ttcccaaatc tggtgctgag cggcgtcgac
     1561 cgcggcaccg ggatagaccc gagcaaggtg cggatcgaga tcccacag
//
LOCUS       DASWGA010000192         3169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1666465, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000192 DASWGA010000000
VERSION     DASWGA010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3169
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1666465"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1419)
                     /locus_tag="VF991_04630"
     CDS             complement(<1..1419)
                     /locus_tag="VF991_04630"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX9555757.1"
                     /translation="MPDARVSNTITGRDAFLRVLSDEGVVKMFGNPGTTELPIMHALS
                     SAPEMGYVLGLQEAIVIAMADGYARASGKLVSCNVHVAPGLGNAIGSIYTSFMSGTPM
                     IVTAGQQEQGHGLTEPLLYAPLIPIATPVVKWATEVNRIEDLPRLLRRAAKVATTAPT
                     GPVFISLPGDILNNEAPLDLGHVTRVDTAVRPSDAALEQLAKRLIAAKRPVILAGHEI
                     ATSDAFAEAAALAETLGAPVLQQTVVHGAHFPSEHPAFIGSLNRDQKHVRRVLSDYDL
                     MFCVGSDVLKMSVWSETEPLPETTKVAMVGLRDWEMGKNFPAEIALRADVKETLKALV
                     PLLKKLGGPQLAERAKASLAEVAARNWTMQRAARKAKVATAPAEKPLPAEWVMMRLAE
                     SLPKDAIVVDEGLTSAASLMSYFPFRDRNSYFGNVSGGIGWGIAAAVGVQIAEPGRRV
                     VALIGDGSAMYSIQALWTAANQK"
     gene            1519..2373
                     /locus_tag="VF991_04635"
     CDS             1519..2373
                     /locus_tag="VF991_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007703450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEX9555758.1"
                     /translation="MTDLEERVARLKCWRGPVTLEPLTGGLTNISFVASCRGEKFVVR
                     CGKDIPMHHVFRDRERAASVAGFEAGLSPEIIHVEPGIMVLRFIDGRTFGEADLAANI
                     GRLVPLLKDCHTKVGRHVRGPVSAFWVFHVIRDYVTLLDGDRRYLEWADRLEQAQVPL
                     PIVFGHHDLLPGNFIDDGQRLWLIDWEYGGFGTAMFDLANLSSNGAFEEAEDAALLDT
                     YFEGKVADDLRRAFRAMKAASALREALWAMVSDVHLRTPGVDYKAHARDYLARAQAGF
                     DRFAERHG"
     gene            2445..>3169
                     /locus_tag="VF991_04640"
     CDS             2445..>3169
                     /locus_tag="VF991_04640"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9555759.1"
                     /translation="MTRSVLYGAMMTALAMVASGVTFAQPYPTRPIRLVVPSSAGAGV
                     TDIMARLVGQHLSTSLGQQIVIDNRPGASGILGAEVVAKAPPDGYTLLIANVSLIVNP
                     YLYAKMPYDPLTDFMPVTMVNSAPLQLVVHPSVPAISVAELVAYAKARPGQLDYGSGG
                     LGSTPFLAAELFKSITGIDVVHVPYKGGAPALAELVGGQLTFMIENVPGTTPFVKSGK
                     LRALAITSTERSPLAPDLPTMVEA"
BASE COUNT          486 a         1072 c         1053 g          558 t
ORIGIN      
        1 cttctgattg gccgccgtcc acagcgcctg gatggaatac atcgcgctgc cgtcgccgat
       61 cagcgccacg acgcggcgcc cgggctcggc gatctgcacg ccgaccgccg cggcgatgcc
      121 ccagccgatg ccgccgctca cgttgccgaa gtagctgttg cggtcgcgga acgggaagta
      181 gctcatcagg ctggccgcgc tggtcaggcc ctcgtcgacg acgatggcgt ccttcggcag
      241 gctttccgcc aaccgcatca tcacccattc ggccggcagc ggcttctccg ccggcgcagt
      301 cgcgaccttg gccttgcgag cggcgcgctg catcgtccag ttgcgtgcgg cgacctcggc
      361 gagcgacgcc ttggcgcgtt cggcgagttg cgggccgccc agcttcttca agagcggcac
      421 cagtgccttc agggtctcct tcacgtcggc gcgcagcgcg atctcggccg ggaagttctt
      481 gcccatctcc cagtcgcgca agcccaccat cgccaccttg gtggtctcgg gcagcggctc
      541 tgtctcgctc cataccgaca ttttcaggac atccgatccg acgcagaaca tcaggtcgta
      601 gtcggagagc acgcgacgca catgcttctg gtcgcggttg agcgagccga tgaaggccgg
      661 atgctcggac gggaaatgcg cgccgtgcac caccgtctgc tgcagcaccg gcgcgcccag
      721 ggtctcggcc agcgcggcgg cttcggcgaa ggcatccgag gtggcgatct cgtggccggc
      781 caggatcacc ggccttttcg ccgcgatcag ccgcttggcg agttgttcga gggctgcatc
      841 ggagggccgc accgcggtgt cgacgcgggt gacgtggccg agatcgagcg gcgcctcgtt
      901 gttcaggatg tcgccgggca gcgaaatgaa gaccggtccg gtcggcgccg tcgtcgccac
      961 cttggcggcg cggcgcagca ggcgcggcag gtcttcgatg cggttgacct cggtcgccca
     1021 tttcaccacc ggcgtggcga tcgggatcag cggcgcgtag agcaggggct cggtcaggcc
     1081 gtggccctgt tcctgctggc cggccgtcac gatcatcggc gtgcccgaca tgaaggaggt
     1141 gtagatcgag ccgatggcat tgccgagacc gggcgcgaca tggacgttgc acgacaccag
     1201 cttgcccgag gcgcgggcgt agccgtcggc catggcgatc acgatggctt cctgcaggcc
     1261 cagtacatag cccatctccg gtgccgagga gagcgcatgc atgatcggca gctcggtcgt
     1321 gccgggattg ccgaacattt ttacgacgcc ttcgtcgctc agcacgcgaa gaaaggcgtc
     1381 gcggccggtg atggtattgg acacgcgtgc gtcgggcatc ggttcctccc tggaggcggc
     1441 agggtagcgc gcccggccgc cgcgtgaaat gatccgaatc ggcggtaggg aggggcacgc
     1501 cgcgatgcga aaggaagcat gaccgacctc gaggagaggg tcgcgcgact gaagtgctgg
     1561 cgggggccgg tgacgctcga gcccctgacg ggcggcctca ccaacatttc cttcgtggcg
     1621 agctgccgcg gcgagaagtt cgtcgtgcgc tgcggcaagg atattcccat gcatcatgtc
     1681 ttccgcgacc gcgagcgcgc cgcctcggtc gcggggttcg aggccggctt gtcgcccgag
     1741 atcatccatg tcgagcccgg catcatggtg ctgcgcttca tcgacggccg caccttcggc
     1801 gaggccgacc ttgccgccaa catcggccgc ctcgtgccac tcctgaagga ctgccatacg
     1861 aaggtcggcc ggcacgtgcg cggacccgtc agcgccttct gggtgttcca cgtcattcgc
     1921 gactacgtga ccctgctcga cggcgaccgg cgctacctgg aatgggccga ccgattggag
     1981 caggctcagg tgccgctgcc catcgtgttt ggccatcacg atcttttgcc cggcaacttc
     2041 atcgacgacg gccagcggct atggctgatc gactgggagt atggcggctt cggcacggcg
     2101 atgttcgatc ttgccaatct ctcgtccaac ggcgccttcg aggaagccga ggacgcagcc
     2161 ctgctcgata cctattttga gggcaaggtc gctgacgact tgcgccgcgc ctttcgcgcc
     2221 atgaaggcgg cgagcgcgct ccgcgaggcg ctgtgggcga tggtctccga cgtccacctg
     2281 cggacgcccg gcgtcgatta caaagcgcac gcccgcgatt atctcgcacg cgcccaggcc
     2341 ggcttcgacc gcttcgcgga gcgtcacgga tagtcccgcg ggcatggttg ttgcgctttt
     2401 tgcatcattg tccgtcgcct gaggaagccc cgatgcagac cttcatgaca cgcagcgtcc
     2461 tctacggcgc catgatgacc gcgctggcga tggtcgcttc aggggtgacg ttcgcccaac
     2521 cctatccgac gcgtccgata cgcctcgtgg tgccctcttc ggcgggcgcc ggcgtcacgg
     2581 acatcatggc gcgcctcgtc ggacagcact tgagcacgag cctcggccag caaatcgtga
     2641 tcgacaaccg cccgggcgcc tcggggatcc tgggagcgga ggtcgtcgcc aaagccccgc
     2701 ccgacggtta cacgctgctg atcgccaacg tctcgctcat cgtcaatccc tatctctatg
     2761 ccaagatgcc gtacgatccg ctgaccgact tcatgcccgt cacgatggtc aactcggcgc
     2821 cgctccagct ggtcgtgcat ccgtcggttc ccgccatctc ggtggccgag ctggtcgctt
     2881 atgccaaggc acggcccggc cagctcgact acgggtccgg aggtctcggc agcacgccgt
     2941 tcctggcggc agagctcttc aaatcgatca ccgggatcga cgtcgtgcac gtgccctaca
     3001 aaggcggcgc gccggcactc gccgagctcg ttggcggtca gttgacgttc atgatcgaga
     3061 acgtgccggg cacgacgcct ttcgtgaagt ccggcaagct cagggcgctc gcgatcacca
     3121 gcactgagcg ctcgccgctc gcgcccgacc tgccgacgat ggtcgaggc
//
LOCUS       DASWGA010000193         2457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2304619, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000193 DASWGA010000000
VERSION     DASWGA010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2304619"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..1455)
                     /locus_tag="VF991_04645"
     CDS             complement(109..1455)
                     /locus_tag="VF991_04645"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9555760.1"
                     /translation="MLARLRNWLFEGGTENLPQRVREAIRQQQDRSEILIGWAQLVLV
                     GLLAVAYETTTMAAGVVQEDYSFETEVFVIYGVFAVVRLVLAYRRWLPEWFLYVSAIA
                     DTALLMGLIYSFHYKYAQPAVFYLKAPILLYIFLLIALRALRFEARFVVVTGLAAVAG
                     WIALILYVLGGRGGPPNMTDDFVEYMTSNAFLIQAEAEKIIAILLTTIVLAIAIARAR
                     HLLVRSVSEGAAARDLSRFFDPGVAARIRGAAMSIKPGEGELRDVAILTVDLRGFTRL
                     STELQPGDVMKLLQDYQGRVCPLIVSNGGSIDKFLGDGILASFGAVAPSPTAAADALR
                     AADAVIEAADRWAAERRAAGLPPLSIGLAAASGRVVFGAVGDGERLEFTVIGDAVNFA
                     AKLEKHNKDEKTRALVDSGTYDKAEQQGYVAPVVRERRPGRKVAGVADLVDIVVLA"
     gene            complement(1455..2291)
                     /locus_tag="VF991_04650"
     CDS             complement(1455..2291)
                     /locus_tag="VF991_04650"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9555761.1"
                     /translation="MRAASSLRGRWRRLALGLPTVLGLKPRGWFIPHRYAPLLPPPGS
                     QPPYPVIEQLFERHAATFIGALDAVDRHAAALEALKALFDQSWFPSLDAAVAYTLVRE
                     RKPQRIVEVGSGHSTRVLSRALGGVGEIVAIDPAPRADIIDLPGVRVVPSTLQAAPLE
                     LFDGLRPGDALFIDSSHILMPGSDVDILLNRVLPMLPAGTLVHIHDVFLPFDYPPIWG
                     WRAYNEQQGIVPLLATGAYLPLFSSAWAERRLGERLSASVVSRLPHPPDAIAASLWLE
                     KR"
BASE COUNT          434 a          817 c          856 g          350 t
ORIGIN      
        1 tggcgctccg ccaacccgtt cccaactcgc aaattacata ggccccgaat ggggaaaggg
       61 caaggcaacg gcacagcggc aggcccgtcc gccgtctcat cgcgcattct aggccaagac
      121 cacaatatcg accaaatcgg cgacgcccgc cacttttctc ccgggccggc gctcgcgtac
      181 cacgggggcg acgtaacctt gctgttcggc tttgtcatag gtgccgctat cgaccagggc
      241 ccgggtcttt tcgtccttgt tgtgtttttc gagtttcgcc gcgaaattga ccgcgtcgcc
      301 aattactgtg aattccagcc tctcgccgtc gccgacggcg ccgaacacga cgcgacccga
      361 tgccgccgcc agaccgatcg acagcggcgg caggccggcg gcgcggcgtt cggcagccca
      421 gcgatcggcg gcctcgatca ctgcatcggc cgcgcgcaaa gcgtcggcgg cggcggtcgg
      481 cgagggcgcc accgccccga acgaagccag gatgccgtcg cccaggaatt tgtcgatgct
      541 gccgccgttg ctcacgatca gcgggcagac gcggccctgg tagtcctgca ggagcttcat
      601 gacatcgccc ggctgaagct cggtcgagag ccgggtgaag ccgcgcagat cgacggtcag
      661 gatcgccacg tcgcgcaatt cgccctcgcc cggtttgatc gacatcgccg caccacggat
      721 gcgggcggcg acgcctgggt cgaagaagcg cgaaaggtcg cgcgcggccg cgccttcgct
      781 gaccgagcgc accagcagat ggcgggcgcg cgcgatggcg atcgccagca cgatggtggt
      841 cagcaggatg gcgatgatct tttcggcttc ggcctggatc aagaacgcat tcgacgtcat
      901 gtactcgacg aaatcgtcgg tcatgttggg cggcccgccg cggccgccca ggacgtagag
      961 gatcagcgcg atccagcccg ccaccgcggc gaggccggtg acgacgacga agcgcgcctc
     1021 gaatctcagc gcgcgcaagg caatcagcag gaatatgtaa agaaggatcg gcgccttcag
     1081 gtagaagacg gccggctggg cgtatttgta atggaaggag tagatcaggc ccatcagcag
     1141 cgccgtgtcg gcgatcgccg acacgtacag gaaccactcg ggcagccagc ggcggtaggc
     1201 cagcaccagg cgtaccaccg cgaacacgcc atagatgacg aacacctcgg tttcgaacga
     1261 atagtcctcc tggaccacgc cggcggccat ggtcgtggtc tcgtaggcga cggcaagcag
     1321 gccgaccagc accagctggg cccagccgat caggatctcg ctgcgatcct gttgttggcg
     1381 gatggcttcg cggacgcgct gcggcaggtt ctccgtgccg ccctcgaaca gccagttgcg
     1441 caggcgggcg agcatcagcg tttctcgagc cacaggctgg cggcgatggc atcgggcgga
     1501 tgcggcaggc gcgacacgac cgacgccgac aggcgttcgc ccagccgccg ctccgcccag
     1561 gcgctggaga acagcggcag gtaggcgccg gtggcgagca gcggcacgat accctgttgt
     1621 tcgttgtagg cgcgccagcc ccagatcggc ggatagtcga acggcaggaa gacgtcgtgg
     1681 atgtgcacca gggtgcccgc cggcagcatc ggcaggacgc ggttgagcag gatatcgacg
     1741 tcgctgcccg gcatcaggat gtggctcgaa tcgatgaaca gcgcatcgcc gggccgcagc
     1801 ccgtcgaaca gctcgagtgg tgctgcctgc agggtcgacg gcacgacgcg cacgcccggc
     1861 aggtcgatga tatcggcgcg cggcgcgggg tcgatggcca cgatctcgcc gaccccgccc
     1921 aaggcgcgcg acagcacgcg ggtcgagtgg cccgaaccca cctcgacgat gcgctgcggc
     1981 ttgcgctcgc gcaccagcgt ataggcgacg gcggcgtcga gcgacgggaa ccatgactgg
     2041 tcgaacaggg ccttcagagc ttccaatgcc gcggcgtggc ggtcgacggc gtcgagcgcg
     2101 ccgatgaacg tcgcggcgtg gcgctcgaag agctgctcga tcaccggata gggcggctgc
     2161 gacccgggcg gcggcaagag cggcgcatag cggtggggaa tgaaccagcc gcgcggcttc
     2221 aggccaagca cggtcggcag ccccagggcc agtcgccgcc aacggccgcg caggcttgat
     2281 gccgctctca cgctgggctc acgggctgag cgtcagccct tcatgggcga cgagcgcgcg
     2341 cggcaggccg ttcggcgctg tccccggccg ggccagcgcc acctcgcgcg ccacgccgtc
     2401 cataaaggcg tcgtcgtggc tggggtcgtg atggaagacg acgagcgtgc cgacgcc
//
LOCUS       DASWGA010000194         5707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1796557, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000194 DASWGA010000000
VERSION     DASWGA010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5707
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1796557"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..261
                     /locus_tag="VF991_04655"
     CDS             <1..261
                     /locus_tag="VF991_04655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEX9555762.1"
                     /translation="EEFKGTGNSEIILDRKVSDKRTFPAIDITKSGTRKEELLVDRAT
                     LSKMWVLRRILMPMGAVDAIEFLLDKLRTAKTNQDFFGSMNQ"
     gene            complement(340..813)
                     /locus_tag="VF991_04660"
     CDS             complement(340..813)
                     /locus_tag="VF991_04660"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9555763.1"
                     /translation="METAPPAGFKPLFRTSPFLDHNGPFFYRENDDGTFVVGLRIRPE
                     HANARGSAHGGLLMTICDIALGYRTTRSQTPSPLLTTASITTDFAGSAKVGDWVEAHV
                     DVHKVGGRLAFANCYLICNGERIVHASAVFARSGDRPVIPTGAKRSGGTSSSSDI"
     gene            complement(816..1706)
                     /locus_tag="VF991_04665"
     CDS             complement(816..1706)
                     /locus_tag="VF991_04665"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEX9555764.1"
                     /translation="MNPYDTLLQEARGRPFACIVGWPVEHSRSPALHGFWLKQHHIDG
                     HYGRLPVEPKRPALEALVAFVKRTPNARGCNLTLPHKIEIMPLLDRIHPLAARIGAVN
                     TVVKQPDGTLEGRNSDGFGFMETLRYNAPHWRPEAGPVVVLGAGGAARAIVATLIDAG
                     VPELRLVNRTQSAAIDLGVAFTPNDGRQIVVDRWNDRAQALDGVSLLVNATSLGMKGQ
                     PPLDLDLAHLPPAAAVCDIVYTPLETNLLAAARGRGNRCIDGLGMLLHQGRPGFEAWF
                     GVTVDVSAEQRRAVAADLGA"
     gene            complement(1703..2311)
                     /locus_tag="VF991_04670"
     CDS             complement(1703..2311)
                     /locus_tag="VF991_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008190765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEX9555765.1"
                     /translation="MPAPLILASASPSRRQLLASAGLSFAIEPSGVDEDEVKHSLIGE
                     QASPQDIATTLAEMKAVRVSQRHRAAMVIGADSTLACNGQLFDKPATLAAARRQLLAL
                     GGRVHELCSSVVVARDGVRLWHWSERAHLTMRPFTESFLDAYLARAGQAVCASVGAYQ
                     LEGLGAHLFSKVEGDYFTILGLPLLPLLSFLAEHGIGLEAAA"
     gene            complement(2324..3403)
                     /locus_tag="VF991_04675"
     CDS             complement(2324..3403)
                     /locus_tag="VF991_04675"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX9555766.1"
                     /translation="MAAPTVVRAQETLKSAKAGFRLVTLSRDLEQPWSIAFLPDGRML
                     ISERPGRLRVFANGKLERTPLAGVPKVYASGQAGLMDICLHPAFAQNRVLYLSYVSDG
                     PGGPVTTAARAELGEGGLRNVAPFFEALPRRRGDLNLGSRIVFDRAGFLYVTCGDRFQ
                     MKQAQDLGDLAGKIVRLKDDGSVPPDNPFVGRPGARPEIFTWGHRNPQGLVLHPQTGK
                     IWEVEHGPKGGDELNILKAGANYGWPLVTSGVNYDGSKITDHRSLPGMEDALRTWVPS
                     ISPCGLCFYTGDRFPGWKGSLFTGALSAYALFRIELGGERYRSEERLLESRLPYIRDV
                     RQGPDGLIYLVTHSDDGGLFRLEPA"
     gene            3525..4697
                     /locus_tag="VF991_04680"
     CDS             3525..4697
                     /locus_tag="VF991_04680"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9555767.1"
                     /translation="MTDRYLRTGIFLAPFHALDENPTLALERDMELLQHLDRLNYHEA
                     WIGEHHSGGFEIIASPEMFIAAAAERTRHIRLGTGVVSLPYHNPFMLASRMTQLDHMT
                     RGRAMFGVGPGALVHDAAKMGIKPADQRSRMNESLDVIMELMAGKSVTRKTDWFDLTA
                     AQLQLPSYSQPGMEMAVACARSPVGAVASGRHGIGMLSIGGTSDDALKAHAANWKIYT
                     DHAAQNGKTADRSKWRIVTFAHVAPTREQAFAEVKFGIDRFAKYFNDVATFPILPPGI
                     TDAAEFMTREGLACIGTPDDCIRHFERLWTGSDGGFGAVLLLANNWADWPATLRSYEL
                     MARFVHPHFQRKANEPRQLSYDTAAGNRGTYSAQSQAAVTSEIEKYQAAQSKRAAE"
     gene            4723..5700
                     /locus_tag="VF991_04685"
     CDS             4723..5700
                     /locus_tag="VF991_04685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003533218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEX9555768.1"
                     /translation="MSKSILIHENGGPEKMQLEDVEVGAPGPGQVKIKHTAIGLNFID
                     VYTRSGLYQTPLPNAVGREAAGVIIAVGPKVKGFKKGDRVAYCGVLGAYCQERLMGVE
                     QLVHIPKGVSDEQAAAIMLKGMTTEYLVDQCAKPWLSKGDIVLFHAAAGGVGLLFGQW
                     AKARGYKAIGTVSSPEKAALAKKNGYKWVIDYTKENVAEKVKAITKGKGVSVVFDGVG
                     KDTWEASLDSLQPRGLLASFGNASGPVAPVPPGVLNTKGSLYLTRPSLGAYTATRKDL
                     EASAKSLFKMVKSGKVKIAIDQRYPLGEAGQAHIDLEGRKTTGQTVIVP"
BASE COUNT         1007 a         1858 c         1954 g          888 t
ORIGIN      
        1 gaggagttca agggcaccgg taactccgaa atcatcctcg accgcaaggt ctccgacaag
       61 cgcaccttcc cggccatcga catcaccaag tcgggcaccc gcaaggaaga gctgctggtc
      121 gaccgcgcga cgctttcgaa gatgtgggtg ctgcgccgca tcctgatgcc gatgggcgcc
      181 gtcgatgcca tcgagttcct gctcgacaag ctgcggaccg ccaagaccaa ccaggacttc
      241 ttcggctcga tgaatcagta aataccgtca tcccgacggg agccgagccc ctcgacttcg
      301 ctcgggacag gctacgcgag gcgcagtgga gggacctgtt catatgtccg acgaagaaga
      361 ggtccctcca ctccgcttcg ctccggtcgg gatgacgggt cgatctccac ttcgggcaaa
      421 caccgcgctg gcatgcacga tgcgttcgcc gttgcagatg agatagcagt tggcgaaggc
      481 cagcctgccg ccgaccttgt gcacgtcgac atgcgcctcg acccagtcgc cgactttcgc
      541 cgaaccggcg aaatcggtgg tgatgctggc ggtcgtcagc aagggcgacg gggtctggct
      601 ccgcgtcgtg cggtagccca gcgcgatgtc gcatatcgtc atcaagagac cgccatgggc
      661 gctgccgcgg gcgttggcgt gctcaggcct gatgcgcagg ccgaccacga aggtgccgtc
      721 gtcgttctcg cggtaaaaga acggcccgtt atggtcgagg aacgggctgg tgcggaacaa
      781 aggtttgaag cctgcgggcg gggcggtttc catcgctagg ctcccaggtc ggcggcaacc
      841 gcccggcgct gctcggcgct gacgtcgacc gtgaccccga accacgcctc gaagcccggg
      901 cggccttgat gcagcagcat gccgagcccg tcgatgcagc gattgccgcg cccgcgggcg
      961 gcggcgagca ggttggtctc gagcggcgtg tagacgatgt cgcagaccgc cgcggcgggc
     1021 ggcagatggg cgagatcgag gtcgagcggc ggctggccct tcatgccgag tgaggtggcg
     1081 ttgaccagca ggctgacgcc gtcgagcgcc tgcgcgcggt cgttccagcg gtcgaccacg
     1141 atctgccggc cgtcgttcgg cgtgaaggcg acgccgagat cgatggccgc gctttgcgtg
     1201 cggttgacca gccgcaattc gggcacgccc gcatcgatca aggtggcgac gatggcgcgc
     1261 gccgcgccgc cggcgcccag cacgacgacc gggccggcct cggggcgcca gtgcggggcg
     1321 ttgtagcgca gcgtttccat gaagccgaag ccgtcgctgt tgcggccctc cagcgtgccg
     1381 tcgggttgct tgaccacggt attgaccgca ccgatgcggg cggcgagcgg atgaatgcga
     1441 tccaagagcg gcatgatctc gatcttgtgc ggcaaggtga ggttgcagcc gcgggcgttg
     1501 ggcgtgcgct tgacgaacgc cacaagcgct tcgagggcgg ggcgcttggg ctcgaccggc
     1561 aggcggccat agtggccgtc gatatgatgc tgcttcagcc agaagccgtg cagcgcgggc
     1621 gagcgcgaat gctcgaccgg ccagccgacg atgcaggcga acggccggcc gcgcgcttct
     1681 tggaggagcg tgtcataggg gttcatgccg ccgcctccag gccgatgccg tgctccgcca
     1741 ggaacgagag cagcggcagc aacggcaggc cgaggatggt gaagtagtcg ccctcgacct
     1801 tgctgaagag atgtgcgccc agcccctcga gctgataggc accgaccgag gcgcacaccg
     1861 cctggccggc gcgtgccagg taggcatcga ggaaggactc ggtgaatggc cgcatggtga
     1921 gatgcgcccg ttcgctccaa tgccagagtc ggacgccgtc cctggccacc accaccgagg
     1981 agcagagctc gtgcacccgg ccgccgagcg ccaaaagctg ccggcgcgcg gcggcgagcg
     2041 tggctggctt gtcgaacagc tggccattgc aggccagcgt ggagtcggcg ccgatcacca
     2101 tggccgcccg atggcgctgc gacacgcgca ccgccttcat ttcggcgagc gtcgtggcga
     2161 tgtcctgcgg cgaggcctgt tcgccgatca ggctgtgctt gacctcgtcc tcgtcgacgc
     2221 ccgacggctc gatcgcgaag gaaagaccgg cactggcgag aagctggcgg cgcgacgggc
     2281 tggcggaggc gagaatgagc ggtgcgggca tgatggcgga aggctaggcg ggctccaggc
     2341 ggaacaggcc gccatcgtcg ctgtgggtga cgagatagat caacccgtcg gggccctggc
     2401 gcacgtcgcg gatataggga agacggcttt cgagcaaccg ctcttcgctg cggtagcgtt
     2461 cgccgccgag ctcgattcgg aacaacgcat aggccgacag cgcgccggtg aacagcgagc
     2521 ccttccagcc cgggaacctg tcgccggtat aaaagcagag cccacagggt gagatggacg
     2581 gcacccaggt gcgcagcgcg tcctccatgc cgggcaggct tctgtggtcg gtgatcttgc
     2641 tgccgtcgta gttgacgccg gaggtgacca gtggccagcc gtaattggcg ccggccttca
     2701 ggatgttgag ctcgtcgccg ccctttggtc catgctcgac ttcccagatc ttgccggtct
     2761 ggggatggag gacgaggcct tggggattgc gatggcccca ggtgaagatc tcgggccggg
     2821 cgcccggacg tccgacgaac gggttgtccg gcggcaccga gccgtcgtct ttcaggcgca
     2881 cgatcttgcc ggcaaggtcg ccaaggtcct gggcctgctt catctggaac cgatcgccgc
     2941 acgtgacata gaggaagccg gcgcggtcga agacgatgcg cgaaccgaga ttgaggtcgc
     3001 cccggcggcg cggcagggcc tcgaaaaacg gtgcgacgtt gcgcagaccg ccctcgccca
     3061 gctcggcccg cgcggccgtc gtcaccgggc cgccggggcc gtccgagaca taggacagat
     3121 aaagcacccg gttctgcgcg aaggccggat gcaggcagat atccatcagg ccggcctggc
     3181 cgctggcgta gaccttgggc acgcccgcga gcggcgtgcg ctccagcttg ccgttggcga
     3241 ataccctgag ccgtcccggg cgctcgctga tcagcatccg cccatcgggc aggaaggcga
     3301 tcgaccaggg ctgctcgagg tcgcggctga gggtgaccag gcgaaagccg gccttggcgc
     3361 ttttcagcgt ttcctgggcg cggaccaccg tcggtgcagc caagctgctg attgtggtca
     3421 ggacgaaacg gcggcgtagc atcgattgtt ctgcccggga cgggatgggc tggcgcgtgg
     3481 gaggccggct actatactcg acgcaacacc aagagggatg ttccttgacc gaccgctacc
     3541 tgcgcacggg tatctttctc gccccgttcc atgccctgga cgagaacccg accctggcgc
     3601 tcgagcgcga catggagctg ctgcaacatc tcgaccggct gaattaccac gaggcgtgga
     3661 tcggcgagca ccattccggc ggcttcgaga tcatcgccag tcccgagatg ttcatcgccg
     3721 ccgcggccga gcgcacccgc cacatccgcc tcggcaccgg tgtggtctcg ttgccctatc
     3781 acaatccctt tatgctggcc tcgcgcatga cccagctcga ccacatgacg cgcggccgcg
     3841 ccatgttcgg cgtcgggccg ggcgcgctgg tccatgacgc ggccaaaatg ggcatcaagc
     3901 ccgccgacca gcgcagccgc atgaacgaat cgctcgacgt gatcatggag ctgatggccg
     3961 gcaagtcggt gacgcgcaag accgactggt tcgacctcac cgccgctcag cttcagctgc
     4021 catcctacag ccagcccggc atggaaatgg ccgtggcgtg cgcccgctcg ccggtcggcg
     4081 ccgtcgcctc gggccgtcac ggtatcggca tgctgtcgat cggcggcacg tcggacgatg
     4141 cgctgaaggc gcatgccgcc aactggaaga tctataccga ccacgcggcg cagaacggca
     4201 agacggccga ccgctcgaag tggcgcatcg tcaccttcgc ccacgtggcg ccgacgcgcg
     4261 agcaggcgtt cgcggaagtg aagttcggca tcgaccgttt cgccaaatac ttcaacgacg
     4321 tggcaacctt cccgatcctg ccgcccggca tcaccgacgc cgccgagttc atgaccaggg
     4381 aagggctcgc ctgcatcggc acgcccgacg actgcatccg ccacttcgag cggctgtgga
     4441 cgggctcgga cggcggtttc ggcgcggtcc ttcttctggc caacaactgg gccgactggc
     4501 cggcgacgct gcgttcctac gagctgatgg cgcgtttcgt ccatccacac ttccagcgca
     4561 aggcgaacga gccgcgccag ttgagctacg acaccgcggc cggcaatcgc ggcacctatt
     4621 cggcgcagtc gcaggcggcg gtcacgagcg agatcgagaa gtatcaggcg gcgcagtcca
     4681 agcgcgccgc cgagtagagc aaaagccaaa aggggagctt tgatgtccaa gtcaatcctg
     4741 attcacgaga atggcggccc ggagaagatg cagctcgaag acgtcgaggt cggcgcaccc
     4801 ggccccggcc aggtcaagat caagcacacc gccatcggtc tcaatttcat cgacgtctat
     4861 acccgttccg gcctgtacca gacgccgctg cccaacgccg tcggccgtga agccgccggc
     4921 gtgatcatcg cggtcgggcc caaagtgaag ggcttcaaga agggcgaccg agtcgcctat
     4981 tgcggcgtgc tgggcgctta ttgccaggag cgcctcatgg gcgtcgagca gctcgtgcac
     5041 atccccaagg gcgtgagcga cgagcaggcc gccgccatca tgctgaaggg catgacgacg
     5101 gagtatctcg tcgatcaatg cgcaaaaccg tggctcagca agggcgacat cgtgctgttc
     5161 catgccgctg ccggcggcgt cggcctgctg ttcggccagt gggccaaggc gcgcggctac
     5221 aaggcgatcg gcacggtctc ctcgccggag aaagccgccc tcgccaagaa gaacggctac
     5281 aagtgggtga tcgactacac caaggagaac gtggccgaga aggtgaaggc gatcaccaag
     5341 ggcaagggcg tgtccgtggt gtttgatggc gtcggcaagg acacctggga ggcctcgctc
     5401 gacagcctgc agccgcgcgg ccttctggcc tcgttcggca atgcgtccgg ccccgtcgcg
     5461 ccagtgccgc ccggcgtgct gaacaccaag ggctcgctct atctgacgcg gccgagcctt
     5521 ggcgcctaca ccgccacgcg caaggacctc gaagccagcg ccaagtcgct gttcaagatg
     5581 gtcaagagcg gcaaggtgaa gatcgcaatc gaccagcgct atccgctggg cgaggcgggc
     5641 caggcccata tcgacctcga aggacgcaag acgacaggac agaccgtcat cgtcccctga
     5701 tccggcc
//
LOCUS       DASWGA010000195         3779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_153009, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000195 DASWGA010000000
VERSION     DASWGA010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3779
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153009"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..397)
                     /locus_tag="VF991_04690"
     CDS             complement(<1..397)
                     /locus_tag="VF991_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555769.1"
                     /translation="MAALNPADPDLAVPLRLPGIAAFRRQIPERLARPEGTGQAASAV
                     AVCAAGTLGESGTLLLSGAPTAVPLSLEADLLASRATGVVSLSDGVLKVLRSGRHRRS
                     SKTVVAALLASSCLSSIDAAAQTWIGADST"
     gene            537..752
                     /locus_tag="VF991_04695"
     CDS             537..752
                     /locus_tag="VF991_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007827289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX9555770.1"
                     /translation="MSGDKCGLKNFFLGEYKMLSIFRHLMKNDDGATAIEYALIASLI
                     SVAAVVAMRNVGTKVNDVLSNVASTMG"
     gene            complement(782..2164)
                     /locus_tag="VF991_04700"
     CDS             complement(782..2164)
                     /locus_tag="VF991_04700"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9555771.1"
                     /translation="MADQPVPLRRYLAANAAALAPSYAALLALHWSGHLEGRPTLIAM
                     AGIGVVTVFLVQRYLGSLARFARFVGELSDEREPVMPRLSFAPATEELAAAAAMLSTG
                     WRRQRASIDNLAASAQAIVDGLPDPLIAVDRQRRIVRTNLAARALLGPVGAERDISTA
                     FRQPQLLASIDGLLETASDGNFTGPDQTAVEFVLSGPPELDMIAHLRRLPRAAADGSL
                     ALIVLHDTTALRRAERMRADFVANASHELKTPIAGLAGFIETLRGPARDDASARERFL
                     GIMADQADRMRRLVDDLLMLSRIEQHEHARPDAEIDLGSVLRGVLDLLQLKASSRKVA
                     LELSVDPALPKAVGDYDELTIVFQNLVDNAVKYAKPATTVRVAARPATEDRVAVAVSD
                     EGDGIPAAHLPRLTERFYRVDAARSRQLGGTGLGLAIVKHVVNRHRGRLDIQSTPGKG
                     STFTVTLPAA"
     gene            complement(2329..2982)
                     /locus_tag="VF991_04705"
     CDS             complement(2329..2982)
                     /locus_tag="VF991_04705"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEX9555772.1"
                     /translation="MPFDNAGRPGPGRGTGERAINLPPALMWLIGINVAIQLLRTLLG
                     DEADQALVLQFGLVPAAYSGGGHDLLAQVAAPLTYQFLHGGWMHLIINMVSLAAFGAP
                     VERLLGARRFVLFYLSAGLVAGLVHVVLFPDSVDPVIGASGAISGVFGGVLMLMRYVG
                     SLTSLLPVAAIWIGLNIFFGLLGGTPGAAGEQVAWTAHIGGFVYGLAAIRLFMPRRS"
     gene            complement(3025..3297)
                     /locus_tag="VF991_04710"
     CDS             complement(3025..3297)
                     /locus_tag="VF991_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555773.1"
                     /translation="MSDPQASDPAGGPPPPPPAVPPTQPPTSRGLGWFFTVSGIVVLL
                     LTLGCIVAVSDGKPFSEDGAMGLVCGSPTLILGGVFLWLGSRRLKR"
     gene            complement(3317..3574)
                     /locus_tag="VF991_04715"
     CDS             complement(3317..3574)
                     /locus_tag="VF991_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555774.1"
                     /translation="MSVPAAPPPPPVHPPPAPPNKGLGWFFVVLGAVILLLTLGCMLA
                     LTDGNLSGEDGEVAFICGSPTLILGALFLWLGSRRLKRSAG"
     gene            complement(3571..>3779)
                     /locus_tag="VF991_04720"
     CDS             complement(3571..>3779)
                     /locus_tag="VF991_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX9555775.1"
                     /translation="MPEGSGYENVFRVTIVEFLDRFNFCLANVKRSCVHFVTPEGRII
                     PFDTYNTFYRPGAAGNARLAEARR"
BASE COUNT          693 a         1216 c         1324 g          546 t
ORIGIN      
        1 aggtgctatc ggcgccaatc caggtttgcg ccgcggcgtc gatcgatgac agacacgaac
       61 tggccaacag ggcggcgacc acggttttgc tggaccggcg gtgtcgacct gaacgcaata
      121 ccttcagaac cccgtcggac agtgacacca cccccgtggc gcggctggca agcaaatcgg
      181 cctccaagct caggggcacc gctgtcggcg ccccgctgag gaggagtgtg ccagattctc
      241 cgagcgtgcc agcagcacaa acggcaacag ccgaggctgc ttgtcccgtt ccctcggggc
      301 gcgctagtcg ttcgggaatc tgccggcgga aagctgcaat accgggcaat cgaagaggca
      361 cggcgagatc gggatcagcc gggttcagcg ccgccacgtc ggaataaatt gatacagatt
      421 tggtattgag taagtcattt cattcaatac gctcaattga tgcctcaact gggtattgag
      481 gcaggtttgt atccgcgatc ggtgggtctt gtggccgttt caacgatctc aaatcgttga
      541 gcggcgataa gtgtgggctt aagaactttt tccttgggga atacaaaatg ctgtccattt
      601 tccggcacct gatgaagaac gacgatggcg cgacggccat cgagtacgcg ctgatcgcct
      661 cattgatctc cgttgcggcg gttgtcgcga tgcgcaacgt cggcaccaag gtcaacgacg
      721 tgttgagcaa cgtcgcgagc acgatgggct gaaacgcacg tcggcgctgc cgatctgtcg
      781 atcacgcggc gggcagcgta acggtgaaag tcgagccctt gcccggcgtg ctctggatgt
      841 cgagccggcc gcggtggcgg ttgaccacgt gcttgacgat ggcaaggccg aggccggtgc
      901 cgcccaactg gcgcgagcgg gcggcgtcga cgcggtagaa gcgctcggtg agccgcggca
      961 ggtgcgccgc ggggatgccg tcgccctcgt cgctcaccgc cacggcgacg cggtcctcgg
     1021 tcgcgggccg cgccgccacc cgcaccgtgg tcgcgggctt ggcatatttc accgcgttgt
     1081 cgaccaggtt ctggaacacg atggtgagct cgtcgtagtc gccgaccgcc ttgggcaagg
     1141 ccggatcgac gctgagctcg agcgccacct tgcgcgacga tgccttgagc tgcagcaggt
     1201 cgaggacgcc cctcagcacg ctgccgaggt cgatctcggc gtcgggcctg gcatgctcgt
     1261 gctgctcgat gcgcgacagc atcaagagat cgtcgaccag ccggcgcatg cggtcggcct
     1321 ggtcggccat gatgcccagg aagcgttcgc gcgcgctggc atcgtcgcgc gccgggccgc
     1381 gcagcgtctc gatgaagccc gcgaggcccg cgatcggcgt cttgagctcg tggctggcat
     1441 tggcgacgaa atcggcgcgc atgcgctcgg cgcggcgcag cgcggtcgtg tcgtgcagca
     1501 cgatcagcgc cagcgagccg tccgccgccg cccgcggcag gcgcctgaga tgggcgatca
     1561 tgtcgagctc gggcgggccc gacagcacga attcgaccgc ggtttggtcc ggcccagtga
     1621 agttgccgtc ggacgccgtc tccaagaggc cgtcgatcga cgccagcagc tggggctggc
     1681 ggaacgcggt ggagatgtcg cgttcggcgc cgactggacc gagcagcgca cgcgccgcga
     1741 gattggtgcg gacgatgcgc cgctgacggt cgacggcgat caatggatcg ggcaggccgt
     1801 cgacgatggc ctgcgcggaa gcggcgagat tgtcgatcga ggcgcgctgg cggcgccagc
     1861 cggtggagag catggccgcc gccgccgcca attcctcggt agcgggcgcg aagctcagcc
     1921 gcggcatcac cggctcgcgc tcgtccgaca actcgccgac gaaacgggcg aagcgggcga
     1981 gcgagcccag gtagcgctgc accaggaaga ccgtcacgac gccgatgccg gccatggcga
     2041 tcagggtcgg ccggccctcg agatggccgg accaatggag cgccagcagg gcggcatagg
     2101 acggcgccag cgccgccgcg ttggccgcga gataacggcg caggggcacc ggctgatcgg
     2161 ccatggcacg acccgccctg cgccgtcatg cttcctctcc cccgctaggg ggagaggcta
     2221 ggtgaggggg aatcgacgtg cgtcgccccc tcacccaacc tctccccctc gagggggaga
     2281 ggagcctgag gagcctcaga gccgtgggac agcagaggcg gatcccgctc acgagcgccg
     2341 cggcatgaac aggcggatgg ctgcaaggcc gtagacgaag ccgccgatat gggcggtcca
     2401 ggcgacctgc tcgccggccg cgcccggcgt gccgccgagc aggccgaaga agatgttgag
     2461 gccgatccag atcgcggcga ccggcaggag cgacgtcagg ctgccgacat agcgcatcag
     2521 catcagcacg ccgccgaata cgccgctgat ggcgcccgag gcgccgatca ccggatcgac
     2581 cgagtcggga aacagcacca catggacaag gccggccacc aagccggccg agaggtagaa
     2641 cagcacgaag cggcgcgcgc ccagcaggcg ttcgaccgga gcgccgaacg ccgccaggct
     2701 caccatgttg atgatcaggt gcatccagcc gccatgcagg aactgatagg tgagcggcgc
     2761 cgccacctgc gccagcagat catgaccgcc gcctgaatag gcggccggca ccaggccgaa
     2821 ctgcaaaacg agggcctggt cggcttcatc gcccagcagg gtgcgcagca gctggatcgc
     2881 cacgttgatg ccgatcagcc acatcagcgc gggcggcaga ttgatggccc gctcgcccgt
     2941 gccgcgcccc ggcccggggc ggccggcgtt gtcgaaaggc attccgcact ccgtgtgaac
     3001 ctggcgccgt gctgacccgc ctgcttagcg ctttaagcgg cgcgagccca gccaaagaaa
     3061 aacgccgccc aggatcagcg tcggcgagcc gcagacgagg cccatggcac cgtcctcgct
     3121 gaacggcttg ccgtcggaca cggcaacgat gcagcccagg gtcagcaaca gcacgacgat
     3181 gcccgacacc gtgaaaaacc agccgagtcc ccggctcgtc ggtggctggg ttggcgggac
     3241 agccggcggt ggtggcggcg ggccaccggc gggatcgctt gcttgggggt cgctcacttg
     3301 aggctccacc tggctttcag cctgctgagc gttttagacg ccgagagccc agccaaagaa
     3361 agagcgcgcc cagaatcagt gtcggcgagc cgcagatgaa ggcaacttcg ccatcctcgc
     3421 cggacaaatt cccgtcggtc agggccagca tgcagcccag ggtgagcagc aagatgacgg
     3481 cgcccaatac gacgaagaac cagccgagcc ccttgttcgg gggcgcgggc ggcggatgga
     3541 ccggaggggg aggcggtgcg gcgggaacgc tcaccggcgt gcctccgcca gccgggcatt
     3601 gcccgccgca cccggtcgat aaaaggtgtt gtaggtatcg aacgggatga tgcggccctc
     3661 gggcgtcacg aaatggacac aggagcgctt gacgttggcc agacagaaat tgaagcggtc
     3721 gagaaactcc acgatggtga cgcggaagac gttctcgtaa cccgaaccct ccggcatcg
//
LOCUS       DASWGA010000196         3527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1666575, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000196 DASWGA010000000
VERSION     DASWGA010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3527
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1666575"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..385
                     /locus_tag="VF991_04725"
     CDS             14..385
                     /locus_tag="VF991_04725"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9555776.1"
                     /translation="MVDGATRAQNREAVDAAITEWTSKRTKHEVTRIIAGAGVPCGAV
                     LTTLELLHDPDLHKRGMMQKIEHPVRGPVTVPGWPLRMSDTKVALKCAPILGADCEAI
                     YGEWLGSSPDEVRDMRQGKVI"
     gene            512..964
                     /locus_tag="VF991_04730"
     CDS             512..964
                     /locus_tag="VF991_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX9555777.1"
                     /translation="MSVAAPPAAASAKSPAPRDNQRIYSIAELAREFAITARTIRFYE
                     DEGLIKPRRQGTTRLYSSGDRTRLSWILRGKRLGFSLAEIRELLDLYQVDRTGMQQLR
                     ELLRRSRLHIADLERKRGDLDAHIKEFKDVEAQVSAELRHRGVDPESD"
     gene            1060..2847
                     /locus_tag="VF991_04735"
     CDS             1060..2847
                     /locus_tag="VF991_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9555778.1"
                     /translation="MAVYKAPLKDINFVLNEVLDVAKLATLPGYQDATPDTIGAILEE
                     AAKLCENVLFPLNRTGDEEGCTYENGVVRTPKGFKHAYDMFREGGWTAVTCDPEYGGQ
                     GLPATVGFALQEMFTASNQAFSMYPGLSHGAYEALSRHGSDELKKVYLPNLTDGTWTG
                     TMCLTEPHCGTDLGMLRTKAEPQADGSYSITGTKIFISAGEHDLAENILHLVLARLPD
                     APGGTKGISLFLVPKFLPKADGSAGERNGIRCGAIEHKMRIKANATCVMNLDGARGWL
                     VGELNRGMPAMFVMMNAARLGVGMQGLGIAETSYQSAAAYARDRLQGRSLTGPKNAAG
                     PADPIIVHPDVRRMLLIQKSFTEAARALSLWVGMLIDEAHSHPEADKRAAADDLVQML
                     TPIIKAYFTDMGSECANLAVQTYGGHGYIRENGVEQLVRDARITQLYEGTNGIQALDL
                     VGRKLPMKGGQAAQRLLGEMSAFIAANKADDKMKEFVEPLEKALGRVQDAVLFLMQHA
                     MKNPDEAGAAATDLLRLMALTAMTFMWNRIAVAAHKGLANGNDNAFYQAKLNTARFYI
                     ARVLPQTTSLNHQIKAGAATLMALPAEAF"
     gene            2892..>3527
                     /locus_tag="VF991_04740"
     CDS             2892..>3527
                     /locus_tag="VF991_04740"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9555779.1"
                     /translation="MQAFELAARSGSFKAAAEALHITASAVSHRIAGLERTLGERLFE
                     RGPRGVVLAPAGRQLAAATGRAFGDLSRALARQSAGSRRLRLSAVPIFASHWLLPRLG
                     QFLSAHPEIELQVEASPRMTDMEAGLVDVALRYGEGNWPDVAAEKIMDLSAVPVAAPA
                     LARRLKLGAPSDLARAPLIRVSPFGTSWTEWARAVGLEPAGFERRKDEAKGL"
BASE COUNT          616 a         1224 c         1187 g          500 t
ORIGIN      
        1 caacgatccg cgtatggtcg acggcgccac ccgcgcccag aaccgggagg ccgtggatgc
       61 ggccatcact gaatggacgt cgaagcgcac caagcacgag gtaacccgga tcatcgccgg
      121 cgccggtgtt ccctgcggcg ccgtcctcac cacgctcgag ctgctgcacg acccggatct
      181 gcataagcgc gggatgatgc agaagatcga gcatccggtg cgcgggccgg tcaccgtgcc
      241 gggttggccg ctgcgcatgt cggacaccaa ggtcgcgctg aaatgcgcgc cgattctcgg
      301 cgcggattgc gaggcgatct atggcgagtg gctcggcagc tcgcccgacg aggtcaggga
      361 catgcggcaa ggcaaggtga tctgaggacc gcgatcgcgg cggcgcagga gccgctgccg
      421 ccgccggaga cctacccgcc aagccgaaac gccacgactg tcccggagtg atggcattga
      481 cgtttacgta aacgtcaact atgaagctcg catgtccgtc gccgcaccgc cggccgctgc
      541 ttcggccaag agcccagcac cgcgcgacaa ccagcgcatc tatagcatcg ccgaactcgc
      601 ccgcgagttc gcgatcacgg cgcgtaccat ccgcttctac gaggatgagg gcctgatcaa
      661 gccgcgccgg cagggaacga cgcggctcta cagcagcggc gatcgcacgc ggctttcctg
      721 gatcctgcgc ggcaagcggc tcggtttctc actggccgag atccgcgagc ttttggacct
      781 ttaccaggtc gatcgcacgg gcatgcagca gttgcgcgag ttgctgcgcc gcagccgtct
      841 gcacatcgcg gacctcgaac gcaagcgcgg cgacctcgac gcgcatataa aggagttcaa
      901 ggacgtggaa gcccaggtga gcgccgaact gcgccaccgc ggggtcgatc cggagagcga
      961 ctaggagacc ccaccccagc cctccccatc tcagcgcctt ccgaggcgcg tatggggagg
     1021 gtgcccgaag ggcgggaggg ggcggcaaag gaggagatga tggctgtcta caaagccccc
     1081 ttgaaggaca tcaacttcgt gctgaacgaa gtgctcgacg tcgccaagct ggcgacgctg
     1141 ccgggctatc aggacgccac gcccgacacc atcggggcca tcctcgagga ggcggccaag
     1201 ctttgcgaga acgtgctgtt tcccctcaac cgcaccggcg acgaggaggg ctgcacctac
     1261 gagaacggcg tcgtgcgcac gcccaaggga ttcaagcacg cctacgacat gttccgcgag
     1321 ggcggctgga cggcggtgac ctgcgatccc gaatacggcg gccagggcct gccggcgacg
     1381 gtgggcttcg cgctgcagga aatgttcacg gcgtccaacc aggccttctc gatgtatccg
     1441 gggctgagcc acggcgccta cgaggcgctg tcgcgccacg gttcggacga gctcaagaag
     1501 gtctacttgc ccaacctcac cgacggcacc tggacgggca cgatgtgcct gaccgagccc
     1561 cattgcggca ccgacctcgg catgctgcgc accaaggccg agccgcaggc cgacggcagc
     1621 tattcgatca ccggcaccaa gatcttcatc tcggccggcg agcacgacct cgccgagaac
     1681 atcctccatc tcgtgctggc gcgcctgccg gacgcgccgg gcggcaccaa gggcatctcg
     1741 ctcttcctgg tgccgaagtt cctgcccaag gccgacggca gcgcgggcga gcgcaacggc
     1801 atccgctgcg gcgccatcga gcacaagatg cgcatcaagg ccaatgcgac ctgtgtgatg
     1861 aatctcgacg gcgcgagggg ctggctggtc ggcgagctga accggggcat gccggcgatg
     1921 ttcgtgatga tgaacgccgc ccggctcggt gtcggcatgc agggcctggg catcgccgag
     1981 acgtcgtacc agagcgccgc ggcctatgcc cgcgaccgcc tgcagggccg ctcgctcacc
     2041 gggccgaaga acgccgcggg tccggccgat cccatcatcg tccatcccga tgtgcggcgc
     2101 atgctcttga tccagaagtc gttcaccgag gcggcgcgcg cgctgtcgct gtgggtcggc
     2161 atgctgatcg acgaggcgca cagccatccc gaggccgaca agcgggccgc cgccgacgat
     2221 ctcgtgcaga tgctgacgcc gatcatcaag gcgtacttta ccgacatggg cagcgagtgc
     2281 gccaacctcg ccgtgcagac ctacggcggc cacggctaca tccgcgagaa cggcgtcgag
     2341 cagctcgtgc gcgacgcgcg catcacccag ctctacgaag gcaccaacgg catccaggcg
     2401 ctcgacctgg tgggccgcaa gctgccgatg aagggcggcc aggcggcgca gcggctgctc
     2461 ggcgagatga gcgccttcat cgccgccaac aaggccgacg acaagatgaa ggaattcgtc
     2521 gagcccttgg agaaggcgct gggacgcgtg caggacgccg tgctcttcct gatgcagcac
     2581 gccatgaaga accccgacga ggcgggcgcc gcggcgaccg accttttacg cctgatggcg
     2641 ctcacggcga tgaccttcat gtggaaccgc atcgccgtcg ccgcccacaa gggcctggcc
     2701 aacggcaacg acaacgcctt ctaccaggcc aagctcaata ccgcgcgctt ctacatcgcc
     2761 cgcgtgctgc cgcagacgac ctcgctcaac caccagatca aggcgggcgc ggcgaccctg
     2821 atggccctgc cagccgaggc gttctgacgg acgacgcaac caacaccctg tcggcgcgcg
     2881 agctgctcgc gctgcaggcc ttcgagctgg cggcccgcag cggctcgttc aaggcggcgg
     2941 ccgaggcgct gcacattacc gcctcggctg tcagccaccg catcgccggc ctggaaagga
     3001 cgctgggcga acgattgttc gagcgggggc cgcgcggcgt ggtgctggcg ccggccgggc
     3061 gtcagctcgc cgccgcaacc ggccgcgcct tcggcgacct gtcccgtgcg ctggcgcgtc
     3121 agagcgccgg cagccggcgt ctgcgcctct ccgccgtgcc gatcttcgcc tcgcactggt
     3181 tgctgccgcg gctcggccag tttctcagcg ctcatcccga gatcgagctg caggtcgagg
     3241 cgagcccgcg catgaccgac atggaggcgg gcttggtcga cgtcgcgctg cgctacggcg
     3301 agggcaactg gccggacgtc gcggccgaga agatcatgga tctgtcggcc gtgcccgtcg
     3361 ccgcgccggc gctggcgcga cgcctcaagc tcggcgcgcc gtccgacctc gcgcgcgcgc
     3421 cgctgatccg cgtctcgccg ttcggcacgt cgtggaccga atgggcgagg gcagtcggcc
     3481 tcgagcccgc cggcttcgaa cggcgcaagg acgaagcaaa gggcctg
//
LOCUS       DASWGA010000197         3743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1415087, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000197 DASWGA010000000
VERSION     DASWGA010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3743
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1415087"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VF991_04745"
     CDS             <1..440
                     /locus_tag="VF991_04745"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9555780.1"
                     /translation="TLDWPVLLPLLGAGLWAVYQVLVRVCTRQDSADTTLVWSAFVAF
                     AATTVVGPWQWQWPDALGWTLLIAMGVLNALANWAIIKALDHAEAGAVQPYAYTLLVW
                     VTVLGAVMFGDFPDTWTILGAAVIVASSLYAWHRDRRASAATA"
     gene            complement(421..1209)
                     /locus_tag="VF991_04750"
     CDS             complement(421..1209)
                     /locus_tag="VF991_04750"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555781.1"
                     /translation="MAGRLLDKVAVVTGAAPRGEGVGNGMATAILFAREGAKVVLVNR
                     SAERADKLARQIKDEGGEAAVFAGDVAKADAAEAMAEFAVKTYGRLDILHNNVGIGAA
                     GTPETVTEADWHKVLEANLTTTMLCTKYCLPKMKQGGGGSIIMVSSIAGALGLMGSPG
                     AVAYATAKAGLHGFALSVAADYATQNIRANCIVVGSVYTPMVAHMGAEARERRKNMVP
                     MQTEGTAWDIAHGAVYLASDESRWVTGVLLPIDGGLAALRQWPR"
     gene            1268..1753
                     /locus_tag="VF991_04755"
     CDS             1268..1753
                     /locus_tag="VF991_04755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007763689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX9555782.1"
                     /translation="MASNSTFEGGCTCRHVRYRMTSKPLFVHCCHCRWCQRETGTAFA
                     LNAMIEADRVELLAGQPEAVMTPSASGKGQKIWRCPHCRVAVWSNYAGAGDALCFVRV
                     GTLDEPDRLPPDIHIFTMSKQPWVVLPDGTPAVREYYQASKMWPKESLQRRAALSDGK
                     S"
     gene            complement(1760..2242)
                     /locus_tag="VF991_04760"
     CDS             complement(1760..2242)
                     /locus_tag="VF991_04760"
                     /inference="COORDINATES: protein motif:HMM:NF018527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HEX9555783.1"
                     /translation="MRSAFIAFTAVVALALAFPALGKDKDDKPGHGRGGPPDRAAAPP
                     GRAVAPAAPVTVVVGDRDRRTVYSYYRTEYIAGNCPPGLAKKNNGCLPPGQAKKMWVV
                     GQPLPPAIVYYPLPPTLVTQLSPPPPGYDYVQVDNDVVLMELGNRMIIDIVADLSSFD
                     "
     gene            complement(2306..2764)
                     /locus_tag="VF991_04765"
     CDS             complement(2306..2764)
                     /locus_tag="VF991_04765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555784.1"
                     /translation="MRVALRALLSAAGLVLAVPALAQKDKPPAPAAAPAAQTPLPTLS
                     MAVPERDRTAVYTYYRAEIAAGRCPPPLVKRDKACLAPAPAKPVWKLDQALADGIAGD
                     APPAALIGKLSPSPAGYQYLRIDNDILVVGIGTRIVAALVADLSRLPAGP"
     gene            complement(2767..>3743)
                     /locus_tag="VF991_04770"
     CDS             complement(2767..>3743)
                     /locus_tag="VF991_04770"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9555785.1"
                     /translation="GYLACGAEGAPLLVFCHGWPELSLSWRHQLPAMAALGFRCIAPD
                     MRGYGRSSTYPRHEDFAQELIVEDMLELLASLGLDKSVWIGHDWGSPVVWNIAAHHPD
                     RTAGVASLCVPYLASGFTLQSVVPLVDRKVYPEAEFPAGQWDYQLFYEESFGKACKGF
                     EANIRNVVKALFRKGDAKAVGRPGRTASVRKTGGWFGGGACPDVPRDADVITEQDLDA
                     YTAALTRNGFFGPDSWYMNHKANGAYAKRASNGGKLAMPVLFLHGAYDTTCETMTSKL
                     AEPMRRDCAQLTEVVVNSGHWMAQEQPVAVNATLAKWLAAKLPDYWKA"
BASE COUNT          576 a         1290 c         1258 g          619 t
ORIGIN      
        1 gaacgctcga ctggccggtg ctgctgccgc tgctgggcgc gggactgtgg gcggtctatc
       61 aggtcctggt cagggtttgc acgcgccagg actcggcgga cacgaccctg gtctggtcgg
      121 ccttcgtcgc ctttgccgcc acgaccgtgg tcgggccttg gcaatggcaa tggccggacg
      181 cgctgggctg gacgctgctg attgccatgg gagtgctgaa cgcacttgcg aactgggcca
      241 tcatcaaggc gctcgaccat gccgaagcgg gcgcggtgca gccttacgcc tataccttgc
      301 tcgtctgggt gacggtgctg ggcgccgtca tgttcggcga cttccccgac acctggacca
      361 tcctcggcgc cgccgtcatc gtggccagca gtctttacgc ctggcaccgc gaccggcggg
      421 ctagcgcggc cactgcctga gcgccgccag cccgccatcg atcggcagca gcacgcccgt
      481 cacccagcgc gattcgtcgg acgcgagata gaccgcgccg tgggcgatgt cccacgccgt
      541 gccctcggtc tgcatcggca ccatgttctt gcgccgctcg cgcgcctcgg cgcccatgtg
      601 agccaccatc ggcgtataca ccgagcccac gacgatgcag ttggcgcgga tattctgggt
      661 ggcgtagtcg gccgccaccg acagggcgaa gccgtgcagg ccggccttgg ccgtggcgta
      721 ggccaccgcg ccgggactgc ccatcaagcc gagcgcaccg gcgatcgacg acaccatgat
      781 gatcgagcca ccgccgccct gcttcatctt cggcaggcag tacttggtgc acagcatggt
      841 cgtggtgagg ttggcttcca gcaccttgtg ccagtcggcc tcagtcacag tctctggcgt
      901 gcccgccgcg ccgatgccga cattgttgtg caggatgtcg agacggccgt atgtcttgac
      961 cgcgaactcg gccatcgcct cggcggcgtc ggccttggcg acgtcgcccg cgaacaccgc
     1021 ggcctcgccg ccctcgtcct tgatctgcct ggcaagcttg tcggcgcgct cggcgctgcg
     1081 attgaccagc acgaccttgg cgccctcgcg cgcgaacagg atcgcggtcg ccatgccgtt
     1141 gccgacgccc tcgccgcgcg gcgccgcgcc ggtcaccacc gccaccttgt ccaaaagacg
     1201 tccggccatt tctctgcccc cgttcgaatg ctatttcggg gcgaacctta gccgggagac
     1261 tcgcgccatg gccagcaact cgaccttcga gggcggctgc acctgccgcc acgtgcgcta
     1321 tcgcatgacg tccaagccgc tgttcgttca ctgctgccat tgccgctggt gccagcgcga
     1381 gaccggtacc gcgtttgcgc tcaacgccat gatcgaggcc gaccgggtcg agcttttggc
     1441 cggccagccc gaggcggtca tgacgccgtc ggcgagcggc aagggccaga agatctggcg
     1501 ctgcccgcat tgccgcgttg ctgtgtggag caactatgcc ggtgcgggcg atgccttgtg
     1561 cttcgtgcgc gtcggcacgc tcgacgagcc cgaccggctg ccgcccgaca tccacatctt
     1621 caccatgtcc aagcagccct gggtcgtgct gcccgacggc acgccggccg tgcgcgaata
     1681 ctaccaggcg agcaagatgt ggcccaagga gagcctgcag cgccgcgccg cgctcagcga
     1741 cggcaagtcc tgaaagctgc tagtcgaagc tgctgaggtc ggcgacgatg tcgatgatca
     1801 tccggttgcc gagctccatc aacacgacat cgttgtccac ctgcacatag tcgtagccgg
     1861 gcggtggcgg tgagagctgc gtcaccagtg tgggcggcag cggatagtag acgatggctg
     1921 gaggcagggg ctggccgacc acccacatct tcttggcctg gcccggcggc aggcagccat
     1981 tgttcttctt cgccaggccg ggcggacagt taccggcgat gtattccgtg cggtagtaac
     2041 tatagacggt ccggcggtcg cgatcgccga cgacgacggt gaccggcgct gcaggcgcca
     2101 cggccctgcc cggcggcgcc gcggccctgt ccggcggacc accgcgacca tggccgggct
     2161 tgtcgtcctt gtccttgccc agcgccggaa aagccagcgc caaggccacg acggctgtga
     2221 aagcaatgaa agctgatcgc acggaagacc cccttatgga tgacgccgta acgcgcggac
     2281 tggccggagg ttccatggct ctctttcacg ggcccgccgg gagacggctg agatcggcga
     2341 cgagggccgc cacgatgcgg gtaccgatgc cgaccaccag gatgtcgttg tcgatgcgca
     2401 gatactggta gcctgccggc gacggcgaca gcttgccgat cagcgcggcg ggcggcgcgt
     2461 cgccggcgat gccgtcggcg agcgcctggt cgagcttcca gaccggtttc gccggagcgg
     2521 gcgccaggca ggccttgtcc cttttgacca agggcggcgg acagcggccg gcggcgatct
     2581 cggcgcggta gtaggtgtag acggcggtgc ggtcgcgctc gggcacggcc atgctgagcg
     2641 tcggcagggg cgtctgggcg gccggcgcgg cggcaggggc gggcggcttg tctttttgcg
     2701 ccaacgccgg cacggcgagc accagacccg cggcggacag aagcgccctc aaagcgactc
     2761 gcatgatcaa gccttccaat agtccggcag cttcgccgcc agccacttgg ccagcgtggc
     2821 gttcaccgcc accggctgct cctgcgccat ccagtggccg gaattcacga ccacttcggt
     2881 gagctgggcg caatcgcggc gcatcggctc ggcgagtttc gacgtcatcg tctcgcaggt
     2941 cgtgtcgtag gcgccatgca ggaacagcac gggcatggcg agcttgccac cgttgctggc
     3001 gcgcttggcg taggcgccgt tggccttgtg gttcatgtac caggagtccg gcccgaagaa
     3061 tccgttcctc gtcagcgccg ccgtgtaggc gtcgagatcc tgctcggtga tgacgtcggc
     3121 atcgcgcggc acgtcgggac aggcgccgcc gccgaaccag ccgcccgtct tgcggaccga
     3181 ggcggtgcgg ccgggccggc ccaccgcctt ggcatcgccc ttgcggaaca gcgccttcac
     3241 cacgttgcgg atgttggcct cgaaaccctt gcaggccttg ccgaagcttt cctcgtagaa
     3301 cagctgatag tcccactggc cggccggaaa ctccgcttcg ggatagacct tgcgatcgac
     3361 cagcggcacc accgactgaa gcgtgaagcc cgacgccagg taaggcacgc acaggctcgc
     3421 cacgcccgcc gtcctgtcgg gatggtgggc cgcgatgttc cataccaccg ggctgcccca
     3481 gtcgtggccg atccacactg atttgtcgag gccgagcgac gccaacagct ccagcatgtc
     3541 ctcgacgatc agctcctggg cgaaatcctc gtggcgagga tacgtgctcg accggccgta
     3601 gccccgcatg tcaggcgcga tgcagcgaaa gcccagcgcc gccatcgccg gcaattgatg
     3661 ccgccacgac agcgagagct cgggccagcc gtggcagaag accagcagcg gcgcaccttc
     3721 tgctccgcag gcgagatagc ccg
//
LOCUS       DASWGA010000198         2428 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1666694, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000198 DASWGA010000000
VERSION     DASWGA010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1666694"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..901
                     /locus_tag="VF991_04775"
     CDS             <1..901
                     /locus_tag="VF991_04775"
                     /inference="COORDINATES: protein motif:HMM:TIGR03261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033225 - ATPase-coupled
                     2-aminoethylphosphonate transporter activity [Evidence
                     IEA];
                     GO_function: GO:0033226 - 2-aminoethylphosphonate binding
                     [Evidence IEA];
                     GO_process: GO:0033223 - 2-aminoethylphosphonate transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="putative 2-aminoethylphosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX9555786.1"
                     /translation="KKAFEAENPDIEILWNRDSTGVITARVLAEQSVQRGDAIWGLAV
                     TSMLLLDKRGLLDPYAPKNLAAIKPAFRDPANPPAWVGMEAWVAAVCFNTVEAPKLSL
                     PKPASWFDLLDPRFKGKLTMPHPASSGTGYFHVSAWIQMFGEAKAWQFMDRLHDNIAV
                     YEHSGTRPCRHAAAGEFPLGISYELAAASARQKGAPIEGLIMKEGGGWDMDAAAILRG
                     TRKLEAVRRLMDFAASRKANELYASFVSQVAMPGIASHIPDYPAGVAESMIKNDFAWA
                     SENRTRILEEWTRRYDGKAAKKN"
     gene            1031..>2428
                     /locus_tag="VF991_04780"
     CDS             1031..>2428
                     /locus_tag="VF991_04780"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX9555787.1"
                     /translation="MHRRQLLKLTGGLPLMSTAHAQTAPTAIRRNRPSDPGWPSADQW
                     KGLNAKVDGQLLALGSPIEACRASPAGAECSAFFRGLKNPWLIGDDPALTQTTGWIDA
                     WASTPSTYAVAARHAADVAAAVDFARTHRLRLVVKGGGHSYQGTSSAPDSLLVWTRKM
                     DKIELHDGFVGQGCSDPPQPAMSVGAGAVWLHAYAAAGKAGRYVQGGGCATVGVAGLI
                     QSGGFGSFSKRYGLAAAGLIEAEVVTADGQVRIANGCTNPDLFWALKGGGGGSLGVIT
                     RLTLRTRELPDFFGGVFVTVQAKSDTAYRELIQRFLVFYREQLFNPQWGEQAQFRPDN
                     TLGIAMVFQGLDSDAATAAWRPFLAWLAERPADFALAAPPTIAALPARHFWDAAWMKA
                     NAPDFLLSDDRPGASADNVFWRTNLGETGWFIEGYESVWMPGRLIEPASQAQLAQALF
                     ASSRHWRIALHFNKGL"
BASE COUNT          386 a          847 c          804 g          391 t
ORIGIN      
        1 caagaaggcg ttcgaggcgg agaaccccga catcgaaatt ctgtggaaca gggattcgac
       61 cggcgtcatc accgcccgcg tgctggccga gcagagcgtg cagcgcggcg atgcgatctg
      121 gggcctcgcc gtcacctcga tgctgctgct cgacaagcgc ggcctgctcg atccctacgc
      181 gcccaagaac ctcgccgcca tcaagcccgc ctttcgcgat cccgccaacc cgccggcctg
      241 ggtcggcatg gaggcgtggg tcgccgccgt ctgcttcaac acggtcgagg cgccgaagct
      301 tagcctgccc aagcccgcct cgtggttcga tctcctcgat ccgcgcttca agggcaagct
      361 caccatgccg catccggctt cttcggggac cggctacttc cacgtctcgg cctggatcca
      421 gatgttcggc gaggccaagg cctggcaatt catggacagg ttgcacgaca acatcgccgt
      481 ctacgagcat tcgggcacgc ggccctgccg ccacgccgcg gcgggcgaat tcccgctcgg
      541 catctcctac gagctggcgg ccgccagcgc gcgccagaaa ggcgcgccga tcgagggcct
      601 gatcatgaag gagggcggcg gctgggacat ggacgcggcc gccatcctgc gcggcaccag
      661 gaagctggag gcggtccgcc ggctgatgga tttcgccgcg agccgcaagg ccaacgagct
      721 ctacgcctcg ttcgtgagcc aggtcgccat gccaggcatc gccagccata ttcccgacta
      781 tccggccggc gtcgccgaat cgatgatcaa gaacgacttc gcctgggcgt cggagaaccg
      841 cacgcgaatc ctggaggagt ggacgcgccg ctacgacggc aaggcggcga agaagaactg
      901 aacagcccgc tcatcacgcc atgctcgccg gtcgtcccac ggtccctgcc ggtcgtcaca
      961 aagggcagcg cgaccaacgg gctgacaggt agaaggcggc gcttcccgcg acaaacccaa
     1021 cgaggacgcc ttgcatcgac gccaactcct caagctgacc ggaggcctgc cgctgatgtc
     1081 gaccgctcat gcccaaaccg caccaactgc cattcgccgc aaccgtccga gcgatccggg
     1141 ctggccgtcg gccgaccaat ggaagggcct caacgccaaa gtggatggcc agctcctggc
     1201 gctcggctcg ccgatcgagg cctgccgcgc ctcgcccgcc ggcgcggagt gctccgcctt
     1261 cttccgcggc ctcaagaatc cctggctgat cggcgacgat ccggcgctca cccagaccac
     1321 cggctggatc gatgcctggg cgtcgacgcc cagcacctat gccgtagcgg cgcgtcacgc
     1381 cgcggatgtc gcggcggcgg tcgacttcgc gcgcacgcat cgcctgcggc tggtcgtgaa
     1441 gggcggcggt cattcctatc agggcacgtc gtccgcgccc gattcgctcc tggtgtggac
     1501 gcgcaagatg gacaagatcg aactgcacga tggcttcgtt gggcagggct gcagcgatcc
     1561 tccgcagccg gcgatgtcgg tcggtgccgg cgcggtgtgg ctgcatgcct atgcggccgc
     1621 cggcaaggcc ggccgctacg tgcagggcgg tggctgcgcc acggtgggcg tggctggcct
     1681 gatccagagc ggcggctttg gctcgttttc caagcgctat ggtctcgcgg cggccggcct
     1741 gatcgaggcc gaggtggtga cagcggacgg ccaggtgcgc atcgccaacg gctgcaccaa
     1801 tcccgacctg ttctgggcgc tgaagggcgg cggtggcggc agcttgggtg tgatcacgcg
     1861 gcttacgttg cgcacgcgcg agctgcccga cttcttcggc ggcgtgttcg tcacggtgca
     1921 ggccaagtcc gacaccgcct atcgcgagct gatccagcgc ttcctcgtct tctatcgcga
     1981 gcagcttttc aatccgcagt ggggcgagca ggcgcagttt cggcccgaca acacgctggg
     2041 cattgccatg gtgttccagg gcctcgacag cgacgccgcc accgcggcgt ggcggccgtt
     2101 ccttgcctgg ctcgccgagc ggcctgccga cttcgcgctg gccgcaccgc ccacgatcgc
     2161 ggcacttccc gcgcggcatt tctgggatgc cgcctggatg aaggcgaacg cgccggattt
     2221 cctgctgagc gacgatcggc cgggcgcctc ggcggacaac gtcttctggc gcaccaatct
     2281 tggggagacc ggctggttca tcgagggcta cgaatcggtg tggatgccgg gccgtctgat
     2341 cgaaccggct tcccaagcgc agctcgccca agccttgttc gccagctcac gccactggcg
     2401 catcgcgctg catttcaaca agggcctg
//
LOCUS       DASWGA010000199         2305 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_529158, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000199 DASWGA010000000
VERSION     DASWGA010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529158"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VF991_04785"
     CDS             complement(<1..277)
                     /locus_tag="VF991_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555788.1"
                     /translation="MPDSTAHSTPPGANGQASAPEPPAAAGPAPSPEAPSTGGLLRAI
                     LRRLRRREKNEAVREAIEELIEETPESDTPISEDQRILLANILKLRDK"
     gene            328..1158
                     /locus_tag="VF991_04790"
     CDS             328..1158
                     /locus_tag="VF991_04790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9555789.1"
                     /translation="MRSYKLPSGGAMPALGLGTWRMGESERRRAQELDAVKYGVELGY
                     PMIDTAEMYGEGRAEEIVGEAIAGLSPRPYIVSKVYPHNATRSGTIAACERSLKRLRI
                     ERIDLYLLHWRGGARLEETFEAFHRLREAGKIADFGVSNFDRDDMEEAARLDRGLTGS
                     NQVLYCLSRRGPEFDLLPWMRQRSIPLMAYSPLDQGGLLRKSALKKLADEVGCTPAHL
                     ALAWLLAQPGVVTIPKSASRERVKENFGALDVKLSPKILAELDRAFPPPKGKQALEML
                     "
     gene            complement(1170..2105)
                     /locus_tag="VF991_04795"
     CDS             complement(1170..2105)
                     /locus_tag="VF991_04795"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007825113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555790.1"
                     /translation="MRVGFIGLGTMGSGISANMRKAGHEMVVHDARRQAAEKICAAGA
                     EWADSPKAVAQATEIVFTSLPGPREFEAVVRGKDGLLAGMSRGQPLFDFSTNSPTLMR
                     SLAPLFAERGAVLLDSPVSGGPSGAASGKMAIWVGGDEAVFKRYRPVLDAAGDQILYI
                     GPIGSASVAKLVHNLSGYMIQTALAEAFTMGVKAGVDPLTLWKAVRNGVTGRRRTFDG
                     LAEHFLPNVYDPPRFALRLAHKDVSLATQVGREVGVPMRLANLTLEEMTEALARGWEG
                     RDSRSSMLLQQERAGLDIKVDPADIAAVLRESSNV"
     gene            complement(2117..>2305)
                     /gene="ybeY"
                     /locus_tag="VF991_04800"
     CDS             complement(2117..>2305)
                     /gene="ybeY"
                     /locus_tag="VF991_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012168541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEX9555791.1"
                     /translation="RQTVWREAKAQNKTPAEHVCHLVVHGTLHLLGYDHETGAADAER
                     MEALERRILKRLGIADPY"
BASE COUNT          370 a          781 c          755 g          399 t
ORIGIN      
        1 tcttgtcgcg cagcttcagg atgttggcga gcaggatcct ctggtcttcg ctgatcggcg
       61 tgtcgctttc gggcgtctcc tcgatcagtt cctcgatcgc ctcgcgcacc gcctcgttct
      121 tctcgcgccg gcgcaggcgc cgcaggatgg cgcgcagcag gccgcccgtg gacggagctt
      181 cggggctcgg cgccgggccg gccgcggcgg gaggttcagg cgccgaagcc tggccattgg
      241 cgcctggcgg cgtgctgtgc gctgtggagt ccggcatggc cgttaagata ggctatcgcc
      301 cccgtgttgc aattgtggat gttcgccatg cgttcctaca aacttccttc gggcggggca
      361 atgccggcgc ttggcctcgg cacctggcgc atgggcgaaa gcgaacgacg gcgcgcccag
      421 gagctcgacg cggtcaaata cggcgtcgaa ctcggctatc cgatgatcga cacggcggaa
      481 atgtatggcg aaggccgcgc cgaggagatc gtcggcgagg cgatcgcggg cctcagcccc
      541 cggccctaca tcgtgagcaa ggtctacccg cacaacgcca cgcgttcagg caccatcgcg
      601 gcctgcgagc gcagcctcaa gcgcctgcgc atcgagcgga tcgacctcta tctgctgcac
      661 tggcgcggcg gcgcgcggtt ggaggagacg ttcgaggcgt tccaccgctt gcgtgaggcg
      721 ggaaaaatcg ccgatttcgg cgtcagcaac ttcgaccgcg acgacatgga agaagccgcg
      781 cgcctcgaca ggggcctgac cggcagcaat caggtgctct actgcctgtc gcggcgcggc
      841 cccgagttcg atcttctgcc gtggatgcgc cagcgctcga ttccgctgat ggcctattcg
      901 ccgctcgacc agggcgggct tttgcgcaaa tcagcgttga agaagctcgc cgacgaagtc
      961 ggctgcacgc cggctcacct cgcgctcgcc tggctgttgg cccagcccgg cgtcgtcacc
     1021 atccccaaat cggccagccg cgagcgcgtg aaggagaatt tcggcgcgct cgatgtcaag
     1081 ctttcgccga agatactggc cgagctcgat cgcgccttcc cgccgccgaa gggtaagcag
     1141 gcgctggaga tgctctaggc gccccagcat tacacgttgc tgctttcgcg caggacggca
     1201 gcgatatcgg ccggatcgac cttgatgtcg agaccggcac gctcctgctg cagcagcatg
     1261 gacgatcgcg aatcgcgtcc ctcccagccg cgcgccagcg cctccgtcat ctcctcgagc
     1321 gtgagattgg cgagccgcat cggcacgccg acctcgcgac cgacctgagt cgccagcgag
     1381 acatccttgt gcgcgagcct gagcgcaaag cgcggcgggt cgtaaacgtt gggcaggaag
     1441 tgctcggcaa ggccgtcgaa ggtgcgacgg cgaccggtga cgccgttgcg gaccgccttc
     1501 cacaacgtga gcggatcgac gccggccttg acgcccatgg tgaaggcttc ggccagcgcc
     1561 gtctggatca tatagccgct cagattgtgc accagcttgg cgaccgacgc cgagccgatc
     1621 ggtccgatat agaggatttg gtcgccggcc gcgtcgagca ccggccgata gcgcttgaag
     1681 acggcttcgt cgccgcccac ccagatcgcc atcttgcccg acgcggcgcc gctcgggccg
     1741 ccgctcaccg gactgtcgag caggacagcg ccgcgttcgg cgaacagcgg tgcaaggctg
     1801 cgcatcaggg tgggtgagtt ggtggaaaaa tcgaacagcg gctggccgcg cgacattccg
     1861 gcgagcagtc catccttgcc gcgcaccacg gcctcgaact cgcgcggtcc gggcagcgag
     1921 gtgaagacga tctccgtcgc ctgggcgacc gccttgggcg aatcggccca ttcggcgccg
     1981 gctgcgcaga tcttttcggc cgcctgccgt cgcgcatcgt gcacgaccat ctcgtgtccc
     2041 gccttgcgca tattggccga aatgcccgag cccatcgtgc ccaggccgat aaatcctacc
     2101 cgcatgcgtc ttctccctaa tatggatcgg caatcccgag ccttttgagg atccgccgct
     2161 ccagcgcttc catgcgctcg gcatcggcgg cgcccgtctc gtgatcgtag cccaatagat
     2221 gaagcgtgcc atgcaccacg agatggcaga catgttcagc cggcgtcttg ttctgcgcct
     2281 tcgcctcgcg ccacacggtc tggcg
//
LOCUS       DASWGA010000200         4184 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1796945, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000200 DASWGA010000000
VERSION     DASWGA010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4184
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1796945"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..1147)
                     /locus_tag="VF991_04805"
     CDS             complement(158..1147)
                     /locus_tag="VF991_04805"
                     /inference="COORDINATES: protein motif:HMM:NF036733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555792.1"
                     /translation="MSAALAPVVASEPSNATGYRSFRLGKFELSRDAYFVAVRWPAKG
                     AKRSHQMPADAFLRACMRDVAWNFFYGWVNFDHVIGTRNHYGKVDFYAGTFNGTLKEA
                     GVDYLEQFDADHIMATFKAILRDWVNEGFDPFAAPVETGTAFGPKQGDNIAAIERTRI
                     ATKRMPGLPGDSPLRHDMPVNRAFADVAQDEPEIHAEPGFKGELHAFSLFKYLSRSDV
                     TWNPSVTAVCKASLACPTTEEFILPVFHGNDRVEWFVQLSDEIVWEVGDKNTGAPRAR
                     VTMKAGDVAAMPADIRHQGYSTKRSMLYVWENVTPGLPQRYETGELSPYPVDF"
     gene            complement(1231..1722)
                     /locus_tag="VF991_04810"
     CDS             complement(1231..1722)
                     /locus_tag="VF991_04810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555793.1"
                     /translation="MSQVHTVFGSITDYTKGSIELVSGEARHYVFSNMFEVAAQSKPY
                     ERVVVARNMEYVQEVMRAEGVSPWFACGHDEFALCMDGEVTVDFIKLKNPPDAAKNGA
                     VLAGDAPEGARMGHVKLRRGHQVLLGAGNAYRFTATRLGVLMQQTVLGDLSVQRWRQI
                     CFT"
     gene            complement(1990..3585)
                     /locus_tag="VF991_04815"
     CDS             complement(1990..3585)
                     /locus_tag="VF991_04815"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX9555794.1"
                     /translation="MRVIPMLTLAAVASLFAFVMQPADAAAETGYAAVWRPGGGAQWW
                     KSGMTADEFKAQDQTYFNQGLRIKSLAVRNGRFTAVWQPGSGAQWWKSGMTADELKAQ
                     DQTYFNQGLRLIALEVDGGKLAAVWRPGSGAQWWKSGMTADEFKAQDQTYFNQGLRIK
                     SLAVRNGRFTAVWQPGSGAQWWKSGMTADELKAQDQTYFNQGLRLIALEVDGGKLAAV
                     WRPGSGAQWWKSGMTVDEFKAQDQTYFNQGLRITTMDIDNGKFAAVWRPGSGAQWWKS
                     GMTAAEIEAQDQTYFNQGLRLTALAIENGKYAAVWQPGSGAQWWSHSRCAVDLKTEDT
                     AYFGQGLRLGFLRLQDQAAGAYHYPWKSGDTRTVAQGNNNPPPGSHNGSQAYAFDFTM
                     PTGTQIRATRAGTVEWLQENLTKNYNPSQPTTAANTPFPAGSLQNWGNAVRIRHSGPF
                     TSWYFHIQTNGVIVKAGDKVQRGQPIATSDNTGRTGGPHLHFQVQADSANWGQSVPIS
                     FNNCDVPTGGQSVTSDNANPNFP"
     gene            complement(3776..>4184)
                     /locus_tag="VF991_04820"
     CDS             complement(3776..>4184)
                     /locus_tag="VF991_04820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003495567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NTE family protein rssA"
                     /protein_id="HEX9555795.1"
                     /translation="IIAVNLNGELLGRRYTEPEPPDATVASRVSVEVVRRMFGKLPVP
                     AALQRKEANANGNPPQPREEPAPGYFDVLASALNIMQDHITRSRMAGEPPHVMLVPRL
                     RSIGLMEFNRAHEAIAEGRACVEQALPALRRYL"
BASE COUNT          647 a         1327 c         1451 g          759 t
ORIGIN      
        1 gcgggtgaat gaggatgcaa gatctgtcgt cctgagcgaa gcgaaggacc tcatcgccgc
       61 ttgatagggc atgagatcct tcgcttcgct caggatgacg taatgcaggc gggatccttc
      121 ggcttcgctc aggacaggcg cccgcggtcc ggcaagatca gaagtcgacg ggatagggcg
      181 acagctcgcc ggtctcgtag cgctgcggca ggccgggggt gacgttctcc cagacgtaga
      241 gcatcgagcg cttggtcgag tagccctgat ggcgaatgtc ggccggcatg gcggcaacgt
      301 cgcccgcctt catggtgacg cgggcccggg gcgcgccggt gttcttgtcg ccgacctccc
      361 agacgatttc gtcggagagc tggacgaacc actcgacccg gtcgttgccg tggaagaccg
      421 gcaggatgaa ctcctcggtg gtcgggcagg cgagcgaagc cttgcacacc gccgtgactg
      481 agggattcca ggtgacgtcg gagcggctga gatacttgaa caggctgaag gcatggagct
      541 cgcccttaaa accgggctcg gcgtggatct cgggctcgtc ctgcgccacg tcggcaaacg
      601 cccggttgac cggcatgtcg tggcgcagcg gcgagtcgcc gggcaggccc ggcatgcgtt
      661 tcgtcgcaat gcgcgtgcgt tcgatggccg cgatgttgtc gccctgcttg gggccgaagg
      721 cggtgccggt ttcgaccggg gcggcgaacg ggtcgaagcc ttcgttcacc cagtcgcgca
      781 ggatcgcctt gaaggtcgcc atgatgtggt cggcgtcgaa ctgctcgagg tagtcgacgc
      841 cggcttcctt cagagtgccg ttgaaggtgc cggcgtagaa atcgaccttg ccgtagtggt
      901 tgcgcgtgcc gatgacgtgg tcgaaattga cccagccgta gaagaagttc caggcgacgt
      961 cgcgcatgca ggcgcgcaag aaggcatcgg ccggcatctg atgcgagcgc ttggcgccct
     1021 tggccggcca gcgcacggcg acgaaatacg cgtcgcgcga cagctcgaac ttgccgagcc
     1081 tgaaactgcg gtagccggtg gcgttgctgg gttcgctggc gacgacgggg gcaagggcgg
     1141 cggacatcgg tgagttcctt cgaggcagtt attagagggg atccctcgca aaagctcggg
     1201 atgacagcca cgggctgtca ggccgtcacc tcaggtaaaa caaatctgac gccacctctg
     1261 gacgctgaga tcgcccagca cggtctgctg catcagcacg ccgagccggg tggcggtgaa
     1321 gcgataggcg ttgccggcac cgagcaggac ctgatggccg cgccggagct tgacatggcc
     1381 catgcgcgcg ccctcggggg catcgccggc gagcacggcg ccattcttcg cggcatccgg
     1441 cggatttttg agcttgatga agtcgaccgt gacctcgccg tccatgcaca gggcgaactc
     1501 gtcatggccg caggcgaacc acggcgaaac gccctcggcg cgcatgacct cctggacgta
     1561 ttccatgttc ctggccacga cgacgcgttc atagggcttc gactgggcgg cgacctcgaa
     1621 catgttcgag aagacgtagt gccgggcctc gccggacacc aattcgatgc tgcctttggt
     1681 gtagtcggtt atggatccga acacggtgtg aacctggctc accgctgcct ccctgtttgg
     1741 cgctgataca agagcgccgg atgccaaggg tcaagccgtc ttctctttgc ggggagcgcg
     1801 ccgctgcgcg cggagtaacc tccgcgctga gtggcgcatc tttatcatgc tcatttggac
     1861 cgcgagcgtc ccgctcgctc atgagcgagc cggaggctcg cggtccggaa gaccatgagc
     1921 gccacggagt ggcgcgctcc cagcaatgag gcgggcctgg aggcccgcgg tcttctagag
     1981 gtggggccgt cacgggaagt tcggattggc gttgtcggag gtcaccgact ggccgccggt
     2041 cggcacgtcg cagttgttga agctgatcgg gaccgactgg ccccagttgg ccgaatcggc
     2101 ctggacctgg aaatgcaaat ggggtccgcc ggtgcggccg gtgttgtccg aggtcgcgat
     2161 cggctggccg cgctgcacct tgtcgcccgc cttcacgatc acgccgttgg tctggatatg
     2221 gaaataccag ctggtgaagg gccccgagtg gcggatgcgc accgcgttgc cccagttctg
     2281 caggctgccg gccggaaacg gcgtgttggc cgccgttgtc ggctggctgg gattgtaatt
     2341 cttggtcagg ttctcctgca gccattcgac ggtgccggcg cgggtcgcgc ggatctgggt
     2401 gccggtgggc atggtgaagt cgaaggcata ggcctggctg ccgttgtgcg accccggcgg
     2461 gggattgttg ttgccctgcg cgaccgtgcg cgtgtcgccg ctcttccacg gatagtggta
     2521 ggcgccggcc gcctggtcct gcagcctgag gaagccgagc cgcagcccct ggccgaaata
     2581 agccgtgtcc tcggtcttga ggtcgacggc gcaacggctg tggctccacc attgcgcgcc
     2641 ggatccgggc tgccagacgg cggcgtactt gccgttctcg atcgccagcg ccgtcaagcg
     2701 aagcccctgg ttgaagtagg tctggtcctg ggcctcgatc tccgccgcgg tcatccccga
     2761 cttccaccat tgcgcgccgc tgccgggccg ccacaccgcg gcgaacttgc cgttgtcgat
     2821 gtccatcgtg gtgatgcgca ggccctggtt gaagtaggtc tggtcctgcg ccttgaactc
     2881 atcgacggtc atgcccgact tccaccattg cgcgccactg ccgggccgcc acaccgccgc
     2941 gagcttgccg ccgtcgacct cgagcgcgat caggcgaagc ccctggttga agtaggtctg
     3001 gtcctgcgcc ttgagctcgt cggcggtcat gcccgacttc caccattgcg cgccgctgcc
     3061 cggctgccac accgccgtga accggccgtt gcggaccgcc agcgatttga tgcgcaggcc
     3121 ctggttgaag taggtctggt cctgggcctt gaactcgtcg gcggtcatgc ccgacttcca
     3181 ccattgcgcg ccactgccgg gccgccacac cgccgcgagc ttgccgccgt cgacctcgag
     3241 cgcgatgagg cgaagcccct ggttgaagta ggtctggtcc tgcgccttga gctcgtcggc
     3301 ggtcatgccc gacttccacc attgcgcacc gctgcccggc tgccacaccg ccgtgaaccg
     3361 gccgttgcgg accgccagtg atttgatgcg caggccctgg ttgaagtagg tctggtcctg
     3421 ggccttgaac tcgtcggcgg tcatgcccga cttccaccat tgcgcgccac cgccggggcg
     3481 ccacaccgcg gcgtagccgg tctcggcggc cgcgtcggcc ggttgcatga cgaaggcgaa
     3541 caggctggcg acggcggcca gggtcagcat cgggataaca cgcatcgcta gtcctccctg
     3601 cttgtaattc tcgcataagt tacagggcgg agccgggcga gtccaggtgg cgttctttgc
     3661 tgggagcgcg ccactccgtg gcgctcatgg tttcttcggg tccaaataag catgagaaga
     3721 tgcgccactc agcgcggagg ttactccgcg cgcagtggcg cgctcccagc aatgactaca
     3781 aataacgccg cagcgccggc agggcctgct cgacgcaggc gcggccttcg gcgatcgcct
     3841 cgtgggcgcg gttgaactcc atcaggccga tgctgcgcag gcgcgggacc agcatgacat
     3901 gcggcggctc tcccgccata cgcgagcggg tgatgtggtc ctgcatgatg ttgagcgcgc
     3961 tggcgagcac gtcgaaatag cccggcgccg gctcctcgcg cggctgcggc gggttgccgt
     4021 tcgcgttcgc ctccttgcgc tgcagcgccg ccgggaccgg gagcttgccg aacatgcgcc
     4081 ggacgacctc gaccgaaacc cgcgacgcca cggtggcgtc gggcggctcg ggctcggtgt
     4141 agcgccgccc gagaagctcg ccgttgaggt tgacggcgat gatg
//
LOCUS       DASWGA010000201         2176 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2429684, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000201 DASWGA010000000
VERSION     DASWGA010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2429684"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1168)
                     /locus_tag="VF991_04825"
     CDS             complement(<1..1168)
                     /locus_tag="VF991_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9555796.1"
                     /translation="MTGALRAFTIGLTAFLTVVDLFATQAILPSLAQAYGVTPAAMGF
                     AVNASTMGMAVGGLAVALFGRSIDRRLGILASLALLSVPTALLATMPDLPIFTLLRVA
                     QGLCMSMAFALTLAYLGEHTSAADTASAFAAYITGNVASNLIGRLVAAGLVDHFGLAT
                     NFWVFAGLNLSGAALVWFGVARTQPMPRTDTNHSSPLTSWLVHLANPALRAAFLTGFV
                     ILFAFIGTFTYVNFVLTRPPFSIGMMMLGAVYFVFLPSVITTPLAGKVAARYGTRPTL
                     WASFAMAAAGLPLLLSAQFGAVLLGLALVAVGTFFAQATATGFVGRAATTERGAASGL
                     YLASYFLGGLVGSAVLGQIFDRLGWTACVIGIGVALVLGGLLAVRLEIRPAARPL"
     gene            complement(1199..1660)
                     /locus_tag="VF991_04830"
     CDS             complement(1199..1660)
                     /locus_tag="VF991_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9555797.1"
                     /translation="MFLKTLVASALLAGVAFAGPAFAGECPAGQMRADATKPSTAAAK
                     AVTDKVLAQIDLADEMVALKGHMMRVRRLEVQPGGIVPWHSHGDRPALIYIVAGDIYE
                     NASNCAVPILHKAGEVARETHVTSHWWQNTGKIPAVLLSFDILHDPNDHNM"
     gene            complement(1787..>2176)
                     /locus_tag="VF991_04835"
     CDS             complement(1787..>2176)
                     /locus_tag="VF991_04835"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator
                     substrate-binding protein"
                     /protein_id="HEX9555798.1"
                     /translation="VIGVGPGHAFDKQNAVRVADLNDQAYVNRLQCEFFDHAGRVWRE
                     NGSKVKMVFRSDRDDWVQSMAMAGLGFTFIPEYAVTMPGLRVRPLIDPEITRTIQVIT
                     VRGRPHQPAVGAFVREILAFPWVNAGG"
BASE COUNT          435 a          678 c          758 g          305 t
ORIGIN      
        1 gcaacggccg cgcagcgggc cgaatctcga gccggacggc cagcagcccg cccaacacca
       61 gcgctacgcc gatcccgatc acgcaggccg tccagcccaa gcgatcgaag atctggccca
      121 gcacggcgct gcccaccagg ccgccgagga aatagctcgc gaggtacagg ccgctcgccg
      181 cgccgcgctc ggtggtggcg gcacgtccga cgaagccggt ggcggtcgcc tgggcaaaga
      241 aagtaccgac cgcgacgagg gcaaggccca gcagcaccgc gccgaactgc gcgctgagca
      301 gcaatggcag gccggcggcg gccatcgcaa aagacgccca cagggtaggc cgcgtgccgt
      361 agcgcgctgc gaccttgccg gcgagcggcg tggtgatcac cgagggcagg aacacgaaat
      421 agaccgcgcc caacatcatc atgccgatcg agaagggcgg ccgcgtcagc acgaaattga
      481 cgtaggtgaa ggtaccgatg aaggcgaaca ggatgacgaa gcccgtgaga aaggcggcac
      541 gcagggcggg attggcgaga tggacgagcc aactcgtcaa aggcgagctg tggttcgtgt
      601 ccgtccgggg catcggctga gtgcgcgcga cgccaaacca taccagcgcc gcaccggaga
      661 gattgaggcc ggcgaacacc cagaaattgg tcgccaagcc gaagtgatcg accaggcctg
      721 cggcgaccag ccggccgatc aggttggagg cgacgttgcc agtgatgtag gccgcgaagg
      781 cgctcgccgt gtcggcggca ctcgtgtgct cgccgagata ggcaagggtc agcgcaaacg
      841 ccattgacat gcacagccct tgcgccacgc gcagcagcgt gaagatcggc aagtcgggca
      901 tggtggccag aagcgccgtc ggcaccgaca acagagcgag gctcgccagg atgccgaggc
      961 gccggtcgat cgaccggccg aacagggcga cggcaaggcc gccaaccgcc atgcccatgg
     1021 tgctggcatt gaccgcgaag cccatggccg ccggcgtgac gccataggcc tgggcgagcg
     1081 agggcaggat ggcctgcgtc gcgaacagat cgacgacagt caggaaggcg gtgaggccga
     1141 tcgtgaacgc gcgcagggca ccggtcatgg tccgtctccg ttgatgagtg aggcggcgtt
     1201 acatgttgtg gtcgttaggg tcgtgcagga tgtcaaacga cagcagcacc gccggaatct
     1261 tgccggtgtt ctgccaccaa tgcgacgtca catgtgtctc gcgcgccact tcgcccgcct
     1321 tgtgcaggat cggcacggcg cagttgctgg cgttttcgta gatatcgccg gccacgatgt
     1381 agatcagcgc cgggcgatcg ccgtggctgt gccacggcac gatgccaccg ggctgcactt
     1441 cgaggcgacg aacgcgcatc atgtggccct taagagccac catttcgtcg gcgagatcga
     1501 tctgggccag caccttgtcg gtgacggctt tggcggcagc ggtcgacggc ttggtggcgt
     1561 cggcgcgcat ttggccggcc gggcattcgc cggcgaatgc agggccagca aaggccacgc
     1621 ctgcgagcag ggccgaagca acgagagtct tcaaaaacat gggtatctcc atctggttga
     1681 ggccgggacc ggaacggtcg cggcgatgga gacagcatca gcgtagggtc gacgaagctg
     1741 aaataccgag tggcaatcgg ttcgatagcc gcaggcgatg actcgcctag ccgccggcgt
     1801 tcacccacgg gaaggccagg atctcgcgca cgaaggcgcc gactgcgggc tgatgcgggc
     1861 ggccgcgcac ggtgatgacc tggatggtgc gggtgatttc agggtcgatc aacggacgta
     1921 cgcgcaagcc cggcatggtc acggcatatt cggggatgaa agtgaagccc agccccgcca
     1981 tcgccatgct ctgcacccag tcgtcacgat cgctgcggaa caccatcttc accttcgagc
     2041 cgttctcgcg ccacacgcgg ccggcatgat cgaagaactc gcattgcagg cggttgacat
     2101 aggcctggtc gttgagatcg gcgacgcgca cggcattctg cttgtcgaag gcgtgacccg
     2161 gcccgacgcc gatcac
//
LOCUS       DASWGA010000202         2593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_153387, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000202 DASWGA010000000
VERSION     DASWGA010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2593
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153387"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1443
                     /locus_tag="VF991_04840"
     CDS             <1..1443
                     /locus_tag="VF991_04840"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HEX9555799.1"
                     /translation="SAQLDACAAAFAGGELARATLRRVLTELLVHFPVYRTYGADGLF
                     SGTDRAVLRRAADGARKTCLAIDRWAIDPVVRLFTDPPARPVAVARFQQLSAPVAAKS
                     VEDTAFYRYGRLLSRNDVGFDVETFALDAASFHARVLARAADHPHAMLATATHDHKRG
                     EDVRARLAVLSGMAGEWAALQARWVEASAQLCSGGAPGAGDTALLLQTIVGAWPLDLE
                     PADRKGRLAFAERLAAWQHKALREAKLASDWAAVDESYESAARRFTLALIAEAALPAL
                     LDEIAALVRRIAPAGAVNGLAQCLLRLTVPGVPDLYQGTEFWDFSLVDPDNRRPVDFA
                     ARVAALGDSDFSPLAACWRDGRIKQALIARLLALRRRTPALFAEGSYVPVPIEGARAA
                     SIVSFVRRHGEHWLLAAVPRLPLGMLQRSDDLAIAPSAWSDTALRLGSLPARALFDGW
                     TGVPVELLGGRTSVARLCSALPLVLLTTQG"
     gene            complement(1647..2105)
                     /locus_tag="VF991_04845"
     CDS             complement(1647..2105)
                     /locus_tag="VF991_04845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555800.1"
                     /translation="MRGHLILVVACAGLTACVPDDAAYTPVFLPPPYSDLPPAPPGES
                     IEAGKPVDLNARQQEAVVAGVIKWMKDPRSAHFGTMQGARNSRGLTVVCGQVDGRNSA
                     GGYVGLSPFIGVLMGSAARPDFVVVGIGASGRERAEVTSLCRDSGVALRA"
BASE COUNT          385 a          908 c          868 g          432 t
ORIGIN      
        1 tccgcccagc tcgacgcctg tgcggcggcg ttcgcgggcg gcgagttggc ccgcgccacc
       61 ctgcgccgcg tgctgaccga attgctggtc cactttccgg tctatcgcac ctacggtgcc
      121 gacggtcttt tttctggtac cgatcgggcg gtcctgcggc gagcggccga cggcgcgcgc
      181 aagacctgcc tcgccatcga ccgctgggcg atcgatccgg ttgtgcgtct gttcaccgac
      241 ccgcccgccc ggccggtcgc ggtcgcgcgc ttccagcaat tgagcgcgcc ggtcgccgcc
      301 aaatccgtcg aggacacggc cttctatcgt tacggccggc tgctgtcgcg caacgatgtc
      361 ggcttcgatg tcgaaacctt cgccctcgac gccgcctcgt tccatgcccg tgtcctggcg
      421 cgagcggcgg accacccgca cgccatgctg gcgacggcca cgcacgacca caagcgcggc
      481 gaggacgtgc gcgcccgcct cgcggtgctg agcggcatgg ccggggaatg ggccgcgctc
      541 caggcgcgct gggtcgaagc gtcggcgcaa ctctgcagcg gtggcgcgcc cggcgccggc
      601 gacacggcgc tgctactgca gaccatcgtc ggcgcctggc cgctcgatct cgagcccgcc
      661 gatcgcaaag gtcgcctggc cttcgccgaa cggctggcag cgtggcagca caaggccctg
      721 cgcgaggcca agctcgccag cgactgggcg gcggtcgacg aaagctacga gagcgccgcg
      781 cgccgcttca ccctggccct gatcgccgag gctgcgctgc ccgctctgtt ggacgagatc
      841 gcggctctcg tgcgccgcat cgcgccggcc ggcgcggtga acgggctggc gcaatgcctg
      901 ctgaggctca cggtgccggg cgtgcccgac ctttaccaag gtaccgagtt ctgggacttc
      961 agcctggtcg atcccgacaa ccgccgtccg gtcgatttcg ccgcacgagt cgcggcgctc
     1021 ggcgattccg acttttcgcc gctcgccgct tgctggcgcg atggccgcat caagcaggcg
     1081 ctgatcgccc gccttcttgc cctgcgccgc cgcacgccgg cgctgttcgc cgagggcagc
     1141 tatgtcccgg tgccgatcga aggcgcccgc gcggcctcga tcgtctcctt tgtccgccgc
     1201 cacggcgagc attggctgtt ggctgccgtt ccacgcctgc cgctcggcat gctgcaacgc
     1261 agtgatgatc tcgccatcgc gccgtccgcg tggtcagaca cggcgctgcg actcggatcg
     1321 ctgccggcac gagccctatt cgatggatgg acgggcgttc cggtcgaact gcttggcgga
     1381 cgaacgtcgg tggctcgcct ctgctcggcg ctgccgttgg tcctgttgac aacccagggc
     1441 taggcagatc gccgccggac ggtgtaagcg aatcatactc gcggcggcgt ggaatgcaga
     1501 cacgcagctt aacgcacggg agccgacggg ggaggaaccc aggagcggaa atccgacagc
     1561 agcggccatg acctcacggt gcgtaggtag caacacatgg ccagccggag tggcgcccgg
     1621 cccgcgagaa ttggtcgtcg cttgcttcag gcccgtagag ccactccgct atcgcggcag
     1681 agcgacgtaa cttcggcccg ttcgcggccg gacgcgccga tgccgacgac gacgaaatcg
     1741 ggccgcgcgg cgcttcccat gagcacgccg atgaagggcg acagcccgac atagccgccg
     1801 gccgaattcc gtccatcgac ctgtccgcaa acgacggtca ggccgcggct gttgcgggcg
     1861 ccttgcattg tcccgaaatg ggccgagcgc ggatccttca tccacttgat gacgcccgcc
     1921 acgaccgcct cttgttgtcg ggcgttgaga tcgaccggct tgcccgcctc gatcgattcg
     1981 ccgggcgggg cgggcggcag atcgctgtag ggcggcggca gaaagaccgg cgtgtaggcc
     2041 gcgtcatcgg gtacgcaggc ggtgagaccc gcgcaggcga ccacgagaat gagatggcca
     2101 cgcatttttc ccccactcgg caacgccacc agactaatcc tcaggaccac ggcggtcgac
     2161 aacgccttat ggtcaaaatc gagtgaaccc aaaggcgcgt cccggcgttc ggtctgacac
     2221 agccgaaacg ggggacgtct cggcttcgac gatcacggca tcaaccatgg ttcctcctga
     2281 attggcccaa acaacgagca gttgtggctc gggttccgtg gccgtcatga ggcctggtac
     2341 cgctgcttaa ggcatcgtcg gctgcaggca acgcggccgt accgcgcggg ttacggcttt
     2401 tgatcgccgt cctcgggcgt ggctgatatc gtcgccgccg aacaagccgc ttcggaggaa
     2461 attctaatga ctactcctgt cgccactgcg cctgcccgtt tgcgcgccct gctggccgaa
     2521 cccggcctcg tcgtgatgcc ggccgtgtgg gatgggcttt cggccaggct gacggccggc
     2581 gccggcttca aga
//
LOCUS       DASWGA010000203        11404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1797160, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000203 DASWGA010000000
VERSION     DASWGA010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 11404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11404
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1797160"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..832
                     /gene="trpS"
                     /locus_tag="VF991_04850"
     CDS             <1..832
                     /gene="trpS"
                     /locus_tag="VF991_04850"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX9555801.1"
                     /translation="TREIASAFLAAGVDGKKQIIFNQSMVPAHAQLAWVFHCVARVGW
                     MNRMTQFKEKAGKDREASSLGLYAYPALMAADILIYKATHVPVGEDQRQHLELTRDIA
                     IKFNNDFNAPDFFPITEPLIFGAATRVMSLRDGTKKMSKSDPSDYSRINLTDDADAIA
                     QKIRRAKTDPLPMPETEADAEKRPDADNLLGIYAALADREKADVVREFAGRQFSDFKA
                     ALTELAVAKLGPIGAEMQRLMKDPGHVDAVLRDGAERARALAAPILAEVYKTVGFLKP
                     "
     gene            complement(938..2659)
                     /locus_tag="VF991_04855"
     CDS             complement(938..2659)
                     /locus_tag="VF991_04855"
                     /inference="COORDINATES: protein motif:HMM:NF019552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HEX9555802.1"
                     /translation="MAGTRPVRSVPARRPLEHSKGGPASESRKFGRWLLGSRLYSLTL
                     GFGTPKSFFAVAPDTWPGDSVGGRRLLAGELLARGASGAVAPGADDPPWQRAGAPALW
                     LDLLNGFGWLRDLRDCGDPGAAAFAARLVDDWIEREWRWSPITWRRDVLAERIVSWIR
                     HYEWLATAADSGFAARFVFSLARQRRHLKRALRRALVGHESVAGLKAMVFADLAFVRE
                     GKRFERSLDQNLARLARFVKRYVLHDGIVAERAPHLQLAVLRHLLDVRAALASAERRA
                     PAELIAAIDRLAPMLRFFRHGDGGLALFNGAWEGDRMLTDLVLARSGSGEAAPMMALA
                     SGFQRLAAGTSLVIADSGSPPGRGMDGIAHAGTLSFEMSAAHERLIVNCGAYPGAPRD
                     WRHFMRYTAAHSTAVVDDTNSTEITDHGALEYRAGNVLVDRAENDGAQWLDMSHDGYR
                     SLYGIIHRRRLWLSPDGGDLRGEDTFSGPEGKPVTVPDRRFIVRFHLHPAVNATLAQS
                     GQAVLMRLPSGRGWRLRASGAGIGLAESIYLGEEGRVRRTEQIVLVGQVPMEGTTVKW
                     ALTRMEG"
     gene            2933..3400
                     /locus_tag="VF991_04860"
     CDS             2933..3400
                     /locus_tag="VF991_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007873293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HEX9555803.1"
                     /translation="MSRVSMFNSPLLLGFDQLERTLDRLAKNAEGYPPYNIERIGENG
                     LRITLAVAGFTTGDLVIELVENQLAVRGKQTEETDRVFLHRGIAARQFQRAFMLADGI
                     EVTGARLDNGLLSIDLARPMSEPRIRTIRIDAGKDTAGADNTIDITARRAQSR"
     gene            3438..3659
                     /locus_tag="VF991_04865"
     CDS             3438..3659
                     /locus_tag="VF991_04865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555804.1"
                     /translation="MENNEATFTPLAEEAFLSLGAQQIAYVKAINLPDGAHAIGIFSA
                     DGKPMAAAPSIEIAQALIRQHDLEPALVH"
     gene            complement(3783..4253)
                     /locus_tag="VF991_04870"
     CDS             complement(3783..4253)
                     /locus_tag="VF991_04870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007814979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX9555805.1"
                     /translation="MEIADLLIGPEAVLASLKASGKKALLAELASRAAAVFTLDERRL
                     FDRLLERERLGSTGIGGGIAIPHARMASLAKPVGLFARLAHPIDFDAIDERPVDIVFL
                     LAAPEGAGADHLKALARVSRLLRDRALVDKLRATGNAEALYALLVESVQAQSAA"
     gene            complement(4373..5908)
                     /gene="rpoN"
                     /locus_tag="VF991_04875"
     CDS             complement(4373..5908)
                     /gene="rpoN"
                     /locus_tag="VF991_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008594776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEX9555806.1"
                     /translation="MRIGPSLILASRQTLAMTPQLQQAIKLLQFSHLELAAFIQQELE
                     KNPLLSEGAADDGPIMEAEAPVPDAPADTAEALAAAAPALAEADERWTREHADRGGDG
                     AASRVGQREDAPDALDFVAERPRSLATHVLEQIELIFSDAAERRIALKLAEGLDEAGY
                     CRLDVPAVAEAVCVSTAMVDSVWARLRQVEPAGLFARTVAECLGAQLAERDRLDPAMK
                     ALLDNLDLVAAGELGQLRRRCGVDDEDLRDMLAELRTLDPRPGQAFDYEPIQPVAPDL
                     FLRAAKDADTGEEGWHIELNTDALPKVLVDRNYHATLMKGARAKPDRDFVAERFQSAN
                     WLVKTLEQRATTILKVAREIVRQQDGFFRQGVSALRPLVLRDIAIATELHESTVSRVT
                     SNKYIATPRGIFELKYFFTSALPACTPGVVVSSESVRSRIRHLVGGENMHQPLSDDRI
                     VDLLKDEGVEIARRTVAKYREAMRIPSSAERRRLGRLGMGRSLPTVVPSALAAQALAG
                     PAD"
     gene            6065..6463
                     /locus_tag="VF991_04880"
     CDS             6065..6463
                     /locus_tag="VF991_04880"
                     /inference="COORDINATES: protein motif:HMM:NF018404.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HEX9555807.1"
                     /translation="MSEPATNKAEPAPAVAGDAAPTKTLYCSFCFKSQHDVRKLIAGP
                     AAIFICDECVELCNQIIDDRPLTSKPSSAEELPTERLLERLGPIEQTVQGKGGQLQAV
                     VDLLRSREVSWAQIGAALGVSRQSAWERFS"
     gene            complement(6467..7078)
                     /locus_tag="VF991_04885"
     CDS             complement(6467..7078)
                     /locus_tag="VF991_04885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HEX9555808.1"
                     /translation="MAITLHRGDLPADLSFGPTVAIDTETMGLNPHRDRLCLVQLSAG
                     DGNAHLVQMPRGPYKAPRLAALLADPKVLKLFHFGRFDIAMLEHALGVRCEPVYCTKI
                     AARLTRTFTDRFGLKDLCKELLGVDLSKQQQTSDWGADALSEEQLAYAASDVLYLHAL
                     KAKLDALLQREGRSELAAAAFQFLPTRARLDVAGWPDVDIFEH"
     gene            complement(7105..7189)
                     /locus_tag="VF991_04890"
     tRNA            complement(7105..7189)
                     /locus_tag="VF991_04890"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7153..7155),aa:Leu,seq:cag)
     gene            complement(7386..7700)
                     /locus_tag="VF991_04895"
     CDS             complement(7386..7700)
                     /locus_tag="VF991_04895"
                     /inference="COORDINATES: protein motif:HMM:NF002151.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX9555809.1"
                     /translation="MPRERGVVIDIAAEVREILVFHLGSDRAKITDDARLADDLGADS
                     LDVVEVVMSFEERFDIEIPNNVATRFVTVGDAVDFIRSQVVQAAESGLDRQQARPRLV
                     VG"
     gene            7986..8237
                     /locus_tag="VF991_04900"
     CDS             7986..8237
                     /locus_tag="VF991_04900"
                     /inference="COORDINATES: protein motif:HMM:NF023665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3606 domain-containing protein"
                     /protein_id="HEX9555810.1"
                     /translation="MAHELGTRGQRDRFRVNIADVDEFNAWCAEFACTPVELKHAVGR
                     AGVMASDVAAFLEREAASRRQRRPRWSAWLQRAARHSSR"
     gene            8322..8513
                     /locus_tag="VF991_04905"
     CDS             8322..8513
                     /locus_tag="VF991_04905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555811.1"
                     /translation="MYAHEAILLACLSLATALGLQTVYAPKLDWDAATLGLTQWTVPL
                     CTGVDIGVDCVLPDKPALD"
     gene            9020..9337
                     /locus_tag="VF991_04910"
     CDS             9020..9337
                     /locus_tag="VF991_04910"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9555812.1"
                     /translation="MVFFDTNSTTISDQANATVSAAAAIAKSAANSKVEVTGYTDTEG
                     SVALNQALSVRRANSVRDALVRNGVSPQSIRVVGAGEQSLLVPTPDQTKYPSNRRAQI
                     IVQ"
     gene            9545..10525
                     /locus_tag="VF991_04915"
     CDS             9545..10525
                     /locus_tag="VF991_04915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012654759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HEX9555813.1"
                     /translation="MNHIRQVTVFGGSGFIGRAIVRALAPTGVLVRVACRRIELAEPI
                     KTAGDVGQITLMRANVRVPESVAVAIAGSQAVINATGIPFEHGRQRYQAVHVAGARTI
                     ADAARAAGVQRLIHVSGIGADARDSKNRYIRSKVDGEDAVVAGFTTATILRPSVVFGP
                     DDAMFNRMARIASLPSFVAPFVPVVGDGRAKVQPVFVGDVADAAAAVLARPATAKSVF
                     ELGGPRIYTYREIAALTLREIDRRKPIIGIPAGLMKIAAFFAEFPAAVGLTPPITRDQ
                     VELMSHDNVVRPGANTLATLGIAATAPEAILPTYLDRFRIGGRYNRHAPA"
     gene            10731..>11404
                     /locus_tag="VF991_04920"
     CDS             10731..>11404
                     /locus_tag="VF991_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020044255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEX9555814.1"
                     /translation="MAERMLKFVGTPQAMPDKRPPAERRRDFEEIFANYARDKAAEQA
                     ARCSQCGVPFCQIHCPLHNNIPDWLKLTAEGRIEEAYELSSATNNFPEICGRICPQDR
                     LCEGNCVIEKGFDSVTIGSVEKFITDTAWNQGWVKPIQPRRERAESVGIVGAGPAGLA
                     AAEQLRRKGYQVTVYDRYDRVGGLLIYGIPNFKLEKEIVQRREKLLRASKVAFKLDCE
                     IGRDISL"
BASE COUNT         2027 a         3814 c         3745 g         1818 t
ORIGIN      
        1 gacccgcgag atcgcctcgg ccttcctggc cgccggcgtc gacggcaaga agcagatcat
       61 cttcaaccag tcgatggtgc cggcgcatgc ccagctcgcc tgggtgttcc actgcgtggc
      121 ccgggtcggc tggatgaacc gcatgacgca gttcaaggag aaggcgggca aggaccgcga
      181 agcctcctcg ctcggcctct acgcctatcc ggcgctgatg gccgccgaca tcctgatcta
      241 caaggccacc cacgtgccgg tcggcgagga ccagaggcag cacctcgagc tgacgcgcga
      301 catcgccatc aagttcaaca acgacttcaa cgcgccggat ttcttcccga tcaccgagcc
      361 gctgatcttc ggcgcggcga cgcgcgtcat gagcctgcgc gacggcacca agaagatgag
      421 caaatcggac ccgtcggact attcgcgcat caacctcacc gacgatgccg atgccatcgc
      481 ccagaagatc cgccgcgcca agaccgaccc gctgcccatg ccggagaccg aggcggacgc
      541 cgaaaagcgg cccgacgccg acaacctttt aggcatctat gcagcacttg ccgatcgtga
      601 gaaggcggac gtcgtccgcg aattcgcggg caggcagttc tccgacttca aggcggctct
      661 gaccgaactc gccgtggcca agctcgggcc gatcggcgcg gagatgcagc ggctgatgaa
      721 agaccccggc catgtcgacg ccgtgctgcg cgacggcgcc gagcgcgccc gcgcactggc
      781 cgcgccgatc ctggccgagg tctataagac ggtagggttc ttgaagcctt agacttcaat
      841 tgtcgtcctg agcgtagcga aggacctcat cgccgcttgc caatggcatg agatccttcg
      901 cttcgctcag gatgacagat tggcttggca ccgcgcccta gccctccatc cgcgtcagcg
      961 cccacttcac ggtggtgcct tccatcggca cctggccgac cagcacgatc tgctcggtgc
     1021 ggcgcacgcg gccttcctcg ccgagataga tgctctcggc gaggccaatg ccggcgccgg
     1081 aagcgcgcag gcgccagccg cggccgctcg gcaggcgcat cagcacggcc tggccgcttt
     1141 gcgccaaagt tgcgttcacc gccggatgga gatggaaacg cacgatgaag cgccggtcgg
     1201 gcaccgtcac cggctttccc tcgggcccgc taaaagtatc ctcgccgcgc aggtcgccgc
     1261 cgtcgggcga cagccacagc cggcgacgat ggatgatgcc gtagagcgag cgatagccgt
     1321 cgtggctcat gtcgagccat tgcgcgccgt cgttctcggc gcggtcgacc aaaacgttgc
     1381 cggcgcgata ttccagcgcg ccgtggtcgg tgatctcggt cgaattggtg tcgtcgacga
     1441 cggccgtcga gtgcgccgcg gtgtagcgca tgaaatgccg ccagtcgcgc ggcgcgccgg
     1501 gataggcgcc acaattgacg atcagccgct cgtgcgccgc gctcatctcg aacgacagcg
     1561 ttccggcgtg ggcgatgccg tccatgccgc ggccgggcgg gctgcccgag tcggcgatca
     1621 ccagcgaggt cccggcggca agccgctgga agccgctcgc cagggccatc atcggcgccg
     1681 cctcgcccga gccggagcgc gccagcacca ggtcggtgag catgcggtcg ccctcccagg
     1741 cgccgttgaa cagcgccagc ccgccgtcgc cgtggcgaaa gaagcgcagc atcggcgcca
     1801 ggcgatcgat ggcggctata agctcggccg gcgcgcggcg ctcggccgag gccagcgccg
     1861 cgcgtacgtc taaaagatgg cgcagcacgg caagctgaag atgcggcgcg cgctcggcca
     1921 cgatgccgtc atgcaggacg tagcgcttca cgaaccgggc gagccgcgcc aggttctgat
     1981 cgaggctcct ctcgaaacgc ttgccctcgc gcacgaaggc gaggtcggcg aagaccatgg
     2041 ctttcagccc ggcgaccgac tcgtggccga ccagggcccg gcgcagcgcg cgcttgagat
     2101 gccggcgctg gcgggcgagc gagaagacga agcgggcggc gaagcctgaa tcggcggcgg
     2161 tcgccagcca ctcgtagtgg cggatccagg aaacgatgcg ctcggccagc acgtcgcgcc
     2221 gccaggtgat gggcgaccag cgccattcgc gctcgatcca gtcgtcgacc aggcgggcgg
     2281 cgaacgcagc agcgccagga tcgccgcagt cgcgtaagtc gcgcagccag ccaaacccgt
     2341 ttagcaggtc gagccagagc gccggcgcgc cggcgcgctg ccacggcggg tcgtcggccc
     2401 cgggcgccac ggcgcccgaa gcgccacggg ccaaaagctc accggcgagc aggcgccggc
     2461 cgccgaccga atcgccgggc caggtgtcgg gcgccacggc aaagaagctt ttgggggtgc
     2521 caaagcccag ggtcagggaa tagaggcggg aaccgagcag ccagcggccg aatttacggc
     2581 tttcgctggc aggaccgccc ttggaatgtt ccaggggccg tcgggccggc acggaacgga
     2641 cggggcgggt gccggccacc aaaggctcac cggaccgtcg catgtctgag gcaacgaggg
     2701 tcatcttttt ctgttctttg gtccgatggc gtttccaccg ggcggtcgag ggtttggcca
     2761 gtttaaccga gccggacggc cgtggcgatg ccctcggaag gcccagaacc ggcccagaac
     2821 cggcccaaac tggcgacgta tctcccttga acgggctcgc cggcacccca gattcactgg
     2881 aagggaaagc ctcaatgggt tcccggccac tcgctcctcg gaggagggtt ttatgagtcg
     2941 cgtgtcgatg ttcaattcgc ccttgttgct gggctttgac cagcttgagc gcacgctcga
     3001 ccgcctggcc aagaacgccg agggctatcc tccttacaat atcgaacgaa tcggtgagaa
     3061 cgggctgcgt atcaccttgg cggttgccgg cttcacgacc ggcgacctcg tgatcgaact
     3121 ggtggaaaac cagcttgccg tgcgcggcaa gcagaccgag gaaaccgacc gggtctttct
     3181 ccatcgcggc atcgccgccc gccagttcca gcgcgccttc atgctggccg acggcatcga
     3241 ggtcacgggc gcccgtctcg acaacggcct gttgtcgatc gacctggcgc gaccgatgtc
     3301 ggagccgcgc atccgaacca ttcgtatcga cgccggcaag gacaccgccg gagcggacaa
     3361 cacgatcgac atcaccgcgc gtcgcgccca atcccgctaa gggggcctcg cgtgttgacg
     3421 ctgccaagga ggtagccatg gaaaacaatg aagcgacttt cacccccctc gcagaggaag
     3481 ccttcctcag cctcggcgcg cagcagatcg cctacgtgaa ggcgatcaac ctgcccgacg
     3541 gcgcgcacgc gatcggcatc ttctcggccg acggcaagcc catggcggct gcgccctcga
     3601 tcgagatcgc ccaggcgctg atccgccaac acgatctcga accggcgctg gtgcactaaa
     3661 tcattgcggg gagcgcgcca ctgcgcgcgg agtaacctcc gcgctgaagt ggcgcgtcat
     3721 gatcttccgg accgcgtatg tgaatgcgcc gagggcgcgc gggacgcgcg cggtccagaa
     3781 gactaagccg cgctttgggc ttgaacggac tcgaccagca gggcgtagag cgcctcggcg
     3841 tttccggtgg cgcgcagctt gtcgaccagg gcgcgatcgc gcagcaggcg cgacacgcgc
     3901 gccagtgcct tgagatggtc ggccccggcg ccttcggggg ctgccagcag gaagacgata
     3961 tcgaccggcc gctcgtcgat ggcgtcgaag tcgatcggat gggcgagccg cgcgaacaga
     4021 ccgaccggct tggccagcga cgccatgcgc gcgtgcggga tggcgatacc gccgccgatc
     4081 ccggtcgaac ccagtcgttc gcgctcgagc agacggtcga acaggcggcg ctcgtcgagc
     4141 gtgaagacag cggcggcgcg gctcgccagc tcggccaaca aagctttctt cccggacgcc
     4201 ttcaggctcg ccagaacggc ctccgggccg atcaacaaat cggcgatttc cacaatgtca
     4261 ccaaagagtt accgggcagt gggcaaagcc gccctgacgg caagagcgcc cctataggcg
     4321 cgtctttcgg agcggtcaag cccgcacact gggggccatt ctggggctgg aatcagtcgg
     4381 ccggaccggc cagcgcctgg gcagcaagcg cgctcggcac gacggtcggc aggctgcggc
     4441 ccatgcccag acgacccagt cggcgccgct cggccgacga gggaatgcgc atggcctcgc
     4501 gatacttggc gacggtgcgg cgagcgatct cgacaccttc gtccttcaac agatcgacga
     4561 tgcgatcgtc ggacagcggc tggtgcatgt tctcgccgcc gaccaggtga cggatgcgcg
     4621 agcgcaccga ttccgaggag acgacgacgc ccggcgtgca cgccggcagc gccgaggtga
     4681 agaagtattt cagctcgaag atgccgcgcg gcgtggcgat gtacttgttg gaggtgacgc
     4741 ggctcaccgt gctttcgtgc agctcggtgg cgatggcgat gtcgcgcagc accagcggcc
     4801 ggagcgcgct gacgccctgg cggaagaagc cgtcctgctg gcgcacgatc tcgcgcgcca
     4861 ctttcaggat ggtggtggcg cgctgctcga gcgtcttgac cagccagttg gccgactgga
     4921 agcgctcggc gacgaaatcg cgatcgggct tggcgcgtgc gcccttcatc agcgtggcgt
     4981 ggtagttgcg gtcgaccagc accttgggca gcgcgtcggt gttgagctcg atgtgccagc
     5041 cctcttcgcc ggtgtcggca tccttggccg cacgcaggaa caggtcgggc gccaccggtt
     5101 ggatgggctc gtagtcgaac gcctggccgg gccgcggatc gagcgtgcgc agctcggcca
     5161 gcatgtcgcg cagatcctcg tcgtcgacgc cgcagcggcg gcgcaactgg ccgagctcgc
     5221 ccgcggccac gagatcgaga ttgtccaaaa gcgccttcat cgccggatcg agccggtcgc
     5281 gttcggcaag ctgggcgccg aggcactccg ccaccgtgcg ggcaaacagg ccggccggtt
     5341 cgacctgacg caggcgtgcc cagaccgaat cgaccatcgc cgtgctgacg cacaccgctt
     5401 cggcgaccgc cggaacgtcg aggcggcaat agcccgcctc gtcgaggccc tcggcgagct
     5461 tgagcgcgat gcgccgctcg gcggcgtcgg agaatatgag ttcgatctgc tcgagcacat
     5521 gggtggcgag cgaacgcggg cgctcggcga cgaaatcgag agcgtcgggc gcgtcctcgc
     5581 gctggccgac ccggcttgcg gcgccatcgc cgccgcggtc ggcatgttcg cgcgtccagc
     5641 gctcatcggc ctcggccagc gccggcgcgg cagccgccaa cgcctcggcg gtatcggccg
     5701 gcgcatcggg aaccggggcc tccgcctcca tgatcgggcc gtcatccgcc gcgccttcgg
     5761 acagcagcgg gttcttttcg agttcctgtt ggatgaaggc ggcgagttcg agatgtgaaa
     5821 actgcagcag cttgatggct tgctgaagct gcggcgtcat tgccaacgtc tggcgcgaag
     5881 ccaggatgag actcggaccg atacgcatgt gcccccaccc cgaaggtctg ttagacctcc
     5941 ccttacaggg gctatagcaa aagccatgcc aagcctcagg gcaagtgaaa ccggcgttga
     6001 caggcgcgtt gtcaggattt acctgactgt caggatattc ctgacatcct gaaaggagct
     6061 cgatgtgtca gaaccggcca ccaacaaggc agagccagcg ccggcagtag cgggcgacgc
     6121 agccccgaca aagacgctgt actgttcctt ctgcttcaag tcacagcatg acgtgaggaa
     6181 gctgatcgcc ggtccagccg ccatcttcat ctgcgacgag tgcgtcgaac tctgcaacca
     6241 gatcattgac gatcgtccac tcacgtccaa gccttcgtct gccgaggagt tgccgacgga
     6301 acgcctgctg gagcggttgg gacccatcga gcagacggtc cagggcaagg gcggccagct
     6361 gcaggccgtg gtcgatcttc tgcgctcgcg cgaggtgagc tgggcacaga tcggcgccgc
     6421 gctgggcgtc tcgcgccagt ccgcctggga gcggttcagc tgaagctcag tgctcgaaaa
     6481 tgtcgacgtc cggccagccg gctacatcca ggcgcgcgcg cgtcggcagg aactggaaag
     6541 cggccgcggc cagctcgctg cggccctcgc gctgcagaag cgcatcgagc ttggccttga
     6601 gcgcgtgcag atacagcacg tcggaggcgg cgtaggccag ctgctcctcg ctcaaggcat
     6661 cggcgcccca gtcggacgtc tgctgctgct tggagagatc gacgcccaag agctccttgc
     6721 acagatcttt caggccgaac cggtcggtga aggttctggt cagccgggcg gcgatcttgg
     6781 tgcagtagac cggctcgcag cgcacgccga gcgcatgttc cagcatggcg atgtcgaagc
     6841 ggccgaaatg aaaaagcttc agcaccttgg gatcggccag cagggccgca aggcgcggcg
     6901 ccttgtaggg cccgcgtggc atctgcacga gatgggcgtt gccgtcgccg gccgagagct
     6961 ggaccaggca cagccggtcg cgatgcggat tgaggcccat ggtctcggtg tcgatggcga
     7021 ccgtgggccc gaacgacagg tcggcgggaa ggtcgccgcg atggagggtg atcgccattt
     7081 accggatgcc tcgcaggccc ggcatggtgc ccaggagaag actcgaactt ccacgcctct
     7141 cggcgctagt acctgaaact agtgcgtcta ccaattccgc cacctgggca cggcatgcgg
     7201 gcaatgcggg ccgtgagtta gggcgggtcc gcgccgatgt caaccgcgcg tccgcccgcc
     7261 ttcactctcc tccccagctt cgctgccatg gagtgggcac aactcaaatt cctctcccca
     7321 gcgccttctg aggcgcgact agggggagag gagcccgatt cgagatgtgt cgtcgtacga
     7381 gtgctctagc cgacaacgag gcgcggtcga gcctgctgac gatccagtcc cgattccgcg
     7441 gcctggacga cctgcgagcg gatgaaatcg accgcgtcgc cgaccgtcac gaacctggtc
     7501 gcgacgttgt tcgggatctc gatgtcgaac ctctcctcga acgacatgac gacttccacg
     7561 acgtcgaggc tgtcggcgcc gagatcgtcg gccagcctgg cgtcgtccgt gatcttcgcc
     7621 ctgtcggatc cgaggtggaa aacgaggatc tctctgacct ctgcggcaat gtctataacc
     7681 acgccacgct ccctgggcat gggccccaca acccacgcct acctgtaggc atatgaagcc
     7741 cggatgactg ccgcagcaag tgttcttgga atgaccgcgt aagaagacga aaagccgtga
     7801 cttcccggcc acacagttgg gcacgggcgc tgccccgggg ccaacgttcc gccgcttttc
     7861 cgccgcgagc gcgcaccatg atcgcactgt ggcatctcgc acagtcgcgc ggtccccggg
     7921 cgctcaggat ggcgtccggc cggccttgat cgtgcacgcg gcggaccacg acggagagat
     7981 ggaaaatggc acacgagctt ggcacgcgcg gacagcgcga tcgcttccgc gtcaacatcg
     8041 ccgacgtgga cgagttcaac gcatggtgcg cggaattcgc ctgcacgccc gtcgagctca
     8101 agcacgcggt cggccgcgcc ggcgtgatgg cgagcgacgt cgccgccttt ctcgagcgcg
     8161 aggcggcaag ccggcggcag cgccgaccgc gctggagcgc ctggctgcag cgggcggcgc
     8221 gacattcgtc gcgctgagcc gaccgactgt gcgaaatctc acagcgccgt tctagatcgc
     8281 gcgcctagga tcgccctcac gctccaacac ggagggctgt catgtacgcg cacgaagcaa
     8341 ttctcctggc ctgtctttcc ctagccaccg cgctcgggct gcagacggtg tacgcgccca
     8401 agctcgactg ggacgcggca acgctgggcc tgacgcaatg gacagtaccg ctctgcaccg
     8461 gcgtcgatat cggcgtcgac tgcgtgctgc ccgacaagcc cgccctcgac tgaacgccgc
     8521 gcacggtggc agacgcgggc aaaatcgcat caacgccttc actgtccacg cagcccgccg
     8581 tattccgccg gactcgggct tcaaggcggc cgatagtatc gcaccgcaat cgccctcgaa
     8641 tatccgccaa ccgggtcact cgcgcacagc gacgggaccc cggcctctag cagcggttgg
     8701 cttggcgatt ggcgtcctgt tcgtagatta tcgctcggcc tttgaggtcg cttcgcattg
     8761 ctcgatcatt cctgcaacgg cctcgacaaa cgagagaaaa ggctgttcga gcaactaccc
     8821 atagtttagg ttcgcctggt tttttagtgg tgcaatttgg tcagttactt cgccaattgt
     8881 cttaaggggg cacaatatgt ttaggacttc gtcaatgatc ctcgggatta tgcttgtcgt
     8941 ggctgcatgc ggtgagtcgt tgcaaactgc gtccttgtca acaccgcctg cggcgccgcc
     9001 gccgccaacc aggacctgga tggtgttctt cgacaccaac agcacgacga tttcggatca
     9061 ggcaaacgcg accgtgagcg ccgccgcggc gattgctaaa tccgctgcga attcgaaagt
     9121 ggaggtgacc gggtacaccg acaccgaagg ctcagtagcc cttaaccagg cgctatcagt
     9181 ccgacgcgcc aattcggtca gagacgcgct tgtccgtaac ggcgtgtcgc ctcagtcgat
     9241 cagggtagtc ggcgccggcg aacaaagcct gctggtccca acgccggacc agaccaagta
     9301 tccgagcaat cgtcgcgccc agatcatcgt gcagtagagt cgcaaacggc catcaaggcc
     9361 acgatcatcc gctggcacca accggcgggc gcgtgagttc gagcaagatg ctaacgcgca
     9421 agatgccgcc tgacctgccg cttgatgggg caggtcagac gcgaaatgca gatctacgcg
     9481 cgaccgctcg cttgatcctt ggcgcccctt gcgcggggct gacattgggc tatagccagc
     9541 gtccatgaac cacatcaggc aggtcacggt tttcggcggc agcggtttca tcggccgggc
     9601 cattgtgcgc gcgctcgcgc cgaccggcgt gctggtgcgg gtggcgtgtc ggcgcatcga
     9661 gctcgccgag ccgatcaaga ccgcgggcga tgtcggccag atcaccctga tgcgcgccaa
     9721 cgtccgggtg cccgagtcgg tggccgtggc catcgccggc agccaggccg tgatcaatgc
     9781 caccggcatt cccttcgaac acggccgtca gcgctaccag gcggtgcatg tggcgggcgc
     9841 gaggacgatc gccgacgccg cccgcgccgc cggcgtgcaa cggctgatcc atgtctccgg
     9901 catcggcgcc gatgcccggg attcgaagaa ccgctacatc cgctccaagg tcgacggcga
     9961 ggacgccgtc gtcgcgggct tcacgaccgc gaccatcctg cggccgagcg tggtcttcgg
    10021 gccggacgac gcgatgttca accgcatggc tagaatcgca tccctgccgt cattcgtggc
    10081 gccgttcgtg cccgtcgtcg gcgacggcag ggccaaggtg cagccggtgt tcgtgggcga
    10141 cgtcgccgac gccgccgcgg ccgtgctggc gcgccccgcg acggccaaga gcgtgttcga
    10201 gctgggcggc ccgcgcatct acacctaccg cgagatcgcc gcgctcacct tgcgcgagat
    10261 cgaccgccgc aagccgatca tcggcatccc ggccgggctg atgaagatcg ccgccttctt
    10321 tgccgaattt cccgccgccg tcggcctgac gccgccgatc acccgtgatc aggtcgagct
    10381 gatgagccac gacaacgtcg tgcggccggg cgccaacacc ctggcgaccc tgggcatcgc
    10441 ggccaccgcg cccgaggcca tcctgccgac ctatctcgac cgcttccgca ttggcggacg
    10501 ttacaaccgc cacgccccgg cataatagtc ccgatacggt cttaattagc ccggcgacaa
    10561 gatcctggca ggatctatcg cccaaatggc agggacagtt actttaaata ggtcagctat
    10621 attgacttat agatgagcgc gtgctctctg caccccagga acgcagcttt agcgccgcct
    10681 accgactttc cgcgtaataa aattacacag tttcgatcga aggataaccc atggccgaaa
    10741 ggatgctgaa gttcgttggc acgccgcagg ccatgccgga caagcggccg cctgccgagc
    10801 ggcgccgcga cttcgaggaa atcttcgcca actacgcgcg cgacaaggcc gctgagcagg
    10861 cggcgcgctg ctcgcagtgc ggcgtgccgt tctgtcagat ccattgcccg ctgcacaaca
    10921 acatccccga ctggctgaag ctcacggctg aagggcgcat cgaggaggcc tacgagcttt
    10981 cctcggcgac caacaacttc ccggagattt gcggccgcat ctgtccgcag gaccggctgt
    11041 gcgaaggcaa ttgcgtcatc gaaaagggct tcgactcggt gaccatcggc tcggtcgaga
    11101 agttcatcac cgacaccgcc tggaaccagg gttgggtgaa gccgatccag ccgcggcgcg
    11161 agcgggccga gagtgtcggc atcgtgggcg ccggtcccgc cggactcgcg gccgccgagc
    11221 agctccgccg caagggctac caggtcacgg tctacgaccg ctacgaccgc gtcggcggcc
    11281 tgctgatcta cggcattccc aacttcaagc tggagaagga gatcgtgcag cgccgcgaga
    11341 agctgctacg cgcctccaag gtcgccttca agctcgactg cgagatcggc cgcgacatct
    11401 ccct
//
LOCUS       DASWGA010000204         6118 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_909424, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000204 DASWGA010000000
VERSION     DASWGA010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6118
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_909424"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VF991_04925"
     CDS             complement(<1..208)
                     /locus_tag="VF991_04925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555815.1"
                     /translation="MSRRRARPWLRWTGFALLAGLSFLFVLPILWMTTTSFQAGEKMF
                     QLTTEWIPSVWHPENYSNALRHAPF"
     gene            complement(205..1158)
                     /locus_tag="VF991_04930"
     CDS             complement(205..1158)
                     /locus_tag="VF991_04930"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9555816.1"
                     /translation="MSSSASAGEPLANGRGARSRVGPWWRPHFQRRIELTGMAFVAPT
                     LLFFAAFKYGPMLWAIGLSFTSYDMVSTPHFVGLENYHNLVADPVFRVTLVNTLVYVI
                     GSTVLITVAALLLALAINTGVPGARHCMAAMFLTNLMPIIAVCLVWRFLFHPFGLVNQ
                     LLSPFGFGRIDWLTNSDTAMPAIIAVTVWRFAPYFMVVFLAGLLAIPDEYYEAAGLDG
                     AGPLRRFWHITLPQLSPIIFFVVVVSGLLCARIFLMPFIITGGGPGNATRVLSMLVYE
                     TGFSYLKMGRAAAISVVLFAIALAFTLGQMRLFARGEENVR"
     gene            complement(1186..2559)
                     /locus_tag="VF991_04935"
     CDS             complement(1186..2559)
                     /locus_tag="VF991_04935"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9555817.1"
                     /translation="MTKSVTSKTPSLIAGQTRRGVLRGLGAAGMGVAAAAPLGRRVIA
                     QAKAPVKIAFWTFDNPQQRPWLHKRIKLFMEQNPNVTVDFQWFPFGDLGKKLSVGFAT
                     GTAPEGFVSQDWFMPTWLDKNLLVPLDVQRLGYPSLQAFSDDYAPAFVAGAVQNGKAY
                     GYPLWFYGFTNLLNTKQFKQVGLDPDKDWPQTWEQLGEVAKRLTVKEGDKFTRQGFKF
                     AMHAAAWTVIQFNPILIGAGGAWFDKDGKCTINNEAGVKAMTVRASIAKKYGAEDPAD
                     TIATNPLPQLDWFKERCSMFFCHPLPPVLIAAQNPAMAAEGYYRPVQYPGFKAGTGNS
                     TTYGFNLVINARASKDKQEVLHDLYKFMMSDPLDCWKDTAPFTLARKSGWIDDPQVRD
                     FPYVKETIRARDEGVPLPRSLVYNEMADSLHRAVQQVMLNNADIKTALDQAAAEVDRA
                     TAAYKKG"
     gene            complement(2810..3733)
                     /locus_tag="VF991_04940"
     CDS             complement(2810..3733)
                     /locus_tag="VF991_04940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9555818.1"
                     /translation="MAGSSGESSAETAPARIVDAHHHVWRRSDLAWLSGPMQLRIFGP
                     YEPIRRDYPIEEYLADAGPCGVVKSVYVQTNWPPGSEGNEAAWIQAVSDWHGFPQAFV
                     GYADLASPALEATLDGLMKHRGLRGIRQQLHWHDNPTYRFAARPDLMSDAGWRRGLGE
                     VAKRKLLFELQVFAGQMVDGARLARDFPDLEIVLLHAGMLEDTSEAGWSAWRAGMRLL
                     SACPNVSVKLSGLGTFSHRCDPALWRPVIEETLGLFGPQRCLFGSNFPIEKLWTDYRS
                     IVGAVAGALSRLSAPDRDAVFYGNAVRLYRL"
     gene            complement(3748..4503)
                     /locus_tag="VF991_04945"
     CDS             complement(3748..4503)
                     /locus_tag="VF991_04945"
                     /inference="COORDINATES: protein motif:HMM:NF019322.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX9555819.1"
                     /translation="MERRPAKKALPRYRVIADVLLEEIRSGRYPPGSLLPTEAKLCKR
                     FDASRHTVREALRVITQRGLITRRPRAGSLVIASEQPTVFTHSVGSLAEWLSYPNDTF
                     RDTFGAKEVVAGRELSLLLKCSADTRWYCISSIRRFNDLDMPLAWTDIYVDPKYAAVV
                     KRRDHGRTPVHQQIEKMFGVVIERAQLEIFPSAVAPKHARALKVTPHSPAMTIIRRYI
                     GPRGDNFETTVTIHPENRYTFTMDLHREFKPFR"
     gene            complement(4530..4934)
                     /locus_tag="VF991_04950"
     CDS             complement(4530..4934)
                     /locus_tag="VF991_04950"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX9555820.1"
                     /translation="MDTEQLYQRGLKRRKKMFGSAAVEQRMNALGEFGKPLQQIINGY
                     AYGDIWGRPGLSPKVRSLVMIGMMAASNHPAELRVHLRGALANGCTPEEIREVLLQVA
                     LYCGIPASLQAHHAALEVIGAADGKSGGRGGE"
     gene            5063..6049
                     /locus_tag="VF991_04955"
     CDS             5063..6049
                     /locus_tag="VF991_04955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX9555821.1"
                     /translation="MIDAAIVGLGWWGKNLVTAVQGKSEHLRFVRGVSVEPDPVRAFA
                     AHHGLALSTSLAEVLRDPNVRVVVLATPHSLHPGQIVAAAEAGKAVFSEKPLALNRAD
                     AIAAVEACRRAGVPLGLGANKRFWPSMRELKRVVASGELGEILHVEGHYSNENSGKFF
                     AAWRDSPNEAPGGAMTGTALHVLDAFVNLIGPVRRVNGQLVSRRPPPDPLDAISVLVE
                     FANGASGVLASMRATPFYWRVHAFGTAGSAEAIGENDIVVRRTGGRARRETFPPVDSL
                     RDELEAFAGAVDGRSAPPIPTVQMIDTVAAFEAVIRSVNGGAPSTVEAYRPN"
BASE COUNT         1068 a         1998 c         2036 g         1016 t
ORIGIN      
        1 cgaacggcgc gtgcctgagc gcgttggaat agttctcggg atgccaaact gacggtatcc
       61 actccgtcgt gagctggaac atcttctcgc cagcctggaa cgatgtcgtc gtcatccaca
      121 ggatcggcag cacgaacagg aaactgaggc ccgccagcag ggcgaagccg gtccaccgca
      181 gccaggggcg ggcgcggcgg cggctcatcg tacgttctcc tcgccgcggg cgaacagacg
      241 catctgcccg agcgtgaagg cgagcgcgat ggcaaacagc accaccgaga tcgccgccgc
      301 ccggcccatc ttgaggtagg agaagccggt ctcgtagacc agcatggaga gcacccgggt
      361 cgcgttgccc ggcccgccgc ccgtgatgat gaagggcatg aggaagatgc gcgcacacaa
      421 cagcccggac accaccacga cgaagaaaat gatcgggctg agctgcggca gggtgatatg
      481 ccagaaccgg cgcaacggtc ccgcgccgtc gaggcccgcc gcctcataat actcgtcggg
      541 gatggcgagc agcccggcca ggaagacgac catgaaatac ggggcgaacc gccacacggt
      601 gaccgcgatg atcgccggca tcgcggtgtc ggaattggtc agccagtcga tgcggccgaa
      661 gccgaacggc gacagaagct gattgaccag gccgaacgga tggaacagga agcgccacac
      721 caggcacacg gcgatgatcg gcatcagatt ggtgaggaac atggccgcca tgcaatggcg
      781 cgcacccggc acgccggtat tgatggcgag cgccagcagc agcgccgcca cagtgatcag
      841 gacggtggac ccgatcacgt agaccagcgt gttgacgagc gtgacacgga agaccggatc
      901 ggcgaccagg ttgtggtagt tctccaggcc gacaaagtgc ggggtcgaca ccatgtcgta
      961 gctcgtgaag ctcagcccga tcgcccacag catgggcccg tacttgaacg cggcgaagaa
     1021 caacaacgtc ggcgccacga acgccatgcc ggtgagctcg atccggcgct ggaaatgcgg
     1081 gcgccaccag ggcccgaccc ggctccgcgc gccgcgtccg ttggccaggg gctcgccggc
     1141 agaagccgag ctcgacatga acgctagacc acgccgcgcc gcaggctatc ccttcttgta
     1201 ggccgccgtg gcgcggtcga cctcggccgc tgcctggtcc agcgccgtct tgatgtcggc
     1261 attgttcagc atcacctgct ggacggcgcg atgcagggag tcggccatct cgttgtagac
     1321 cagcgagcgc ggcagcggca cgccttcgtc cctggcgcgg atggtctcct tcacgtacgg
     1381 gaagtccctg acctgcggat cgtcgatcca gccgctcttg cgcgcgagcg tgaacggcgc
     1441 ggtgtccttc cagcagtcga gcggatcgct catcatgaac ttgtagaggt cgtgcaggac
     1501 ctcctgcttg tccttcgacg cgcgggcatt gatgacgagg ttgaagccat aggtcgtcga
     1561 gttgccggtg ccggccttga accctggata ttgcacgggc cggtagtagc cttcggccgc
     1621 catcgccgga ttctgcgcgg cgatgagcac cggcggcagc ggatgacaga agaacatcga
     1681 gcaccgctcc ttgaaccagt cgagctgggg cagcggattg gtggcgatgg tgtcggccgg
     1741 atcctcagcg ccatacttct tggcgatcga ggcgcggacc gtcatggcct tgacaccggc
     1801 ctcgttgttg atcgtgcact tgccgtcctt gtcgaaccag gcgccgcccg ccccgatcag
     1861 gatgggattg aactggatca ccgtccaagc ggcggcgtgc atggcgaact tgaacccctg
     1921 gcgggtgaac ttgtcgccct ccttgacggt cagccgcttg gccacctcgc cgagctgctc
     1981 ccaagtctgc ggccaatcct tgtcgggatc gaggccgact tgcttgaatt gcttggtgtt
     2041 gagcagattg gtgaagccgt agaaccacaa gggatagccg tacgccttgc cgttctggac
     2101 cgcgcccgcg acaaaggccg gcgcgtagtc gtcgctgaaa gcctgcagcg agggatagcc
     2161 caggcgctgc acgtcgagcg gcacgagcag gttcttgtcg agccaggtcg gcatgaacca
     2221 gtcctggctg acgaagccct ccggcgccgt gccggtggca aagccgacgc tgagcttctt
     2281 gccgagatcg ccgaacggga accactggaa gtcgacggtg acgttcgggt tctgctccat
     2341 gaagagcttg atgcgcttgt gcagccaggg ccgctgctgc ggattgtcga aggtccagaa
     2401 ggcgattttg accggcgcct tcgcctgggc aatgacccgc cgcccgagag gagccgccgc
     2461 ggcgacaccc attcccgccg cgccgaggcc gcgcaggacg ccgcgtcgcg tctgtccggc
     2521 aatgagcgat ggggtcttgc tggtcaccga cttggtcatg tctgcctccc gccaggctcg
     2581 gtcgtttttg cctcgatgcg acgcagggca tgcgccggag gcgatgtgcg actgcgatat
     2641 cggagagatg atcgccgcgc ttccttccca tgaaagcgag ggtaccgtta cgtcggcacc
     2701 cttcgtttag ggtgacggta ttttgtccgt acaaaagtgt caagttgtcc gaacaagcgg
     2761 acgcgcgagt ccattcgcct cgcccgtatg atgggggagg cgatgatttc tagagtcggt
     2821 agagcctcac ggcgttgcca taaaacacag cgtcgcggtc gggcgcgctc agccgcgaga
     2881 gagcgccagc caccgcaccg acgatcgacc ggtagtcggt ccacaacttc tcgatcggga
     2941 agttgctccc gaacaggcaa cgctgcggcc cgaacaggcc gagcgtctcc tcgatcaccg
     3001 gccgccacag cgccggatcg cagcgatgcg agaatgtgcc gagccccgac agcttgacgc
     3061 tgacattggg gcaggccgac agcagccgca ttcccgcccg ccatgccgac caaccggctt
     3121 cgctcgtatc ctccagcatg ccggcatgaa gcagcacgat ttccagatcg ggaaaatcgc
     3181 gcgccagcct cgcgccgtcg accatctggc cggcaaagac ctggagctcg aacaagagct
     3241 tccgcttggc gacctcgccg aggccgcgcc gccacccggc gtcgctcatc aggtccgggc
     3301 gggcggcaaa tcgataggtc gggttgtcat gccagtgaag ctgctggcgg atgccgcgca
     3361 ggccacggtg tttcatcagg ccgtccagcg tcgcctcgag ggcgggcgag gcgagatcgg
     3421 cgtagcccac gaaggcctgc gggaaaccgt gccagtccga taccgcctgg atccaggccg
     3481 cctcgttgcc ctcgctgccc ggcggccagt tcgtctgcac gtagaccgac ttcacgacgc
     3541 cgcagggccc tgcgtcggcg agatattcct cgatcgggta gtcgcggcgg atcggctcgt
     3601 aaggcccgaa aatccggagc tgcatcggcc cggagagcca agcgagatcc gaccgccgcc
     3661 agacgtgatg gtgggcatcg acgatgcgcg ccggcgcggt ctcagcactc gattccccgg
     3721 acgagcccgc catgccccgc tccccggcta gcgaaacggc ttgaattcgc gatgcaggtc
     3781 catcgtgaag gtgtagcggt tttcgggatg gatggtgacg gtcgtctcga aattgtcgcc
     3841 gcgcgggccg atgtagcgcc ggatgatcgt catggccggc gaatgcggcg tgaccttgag
     3901 cgcgcgcgcg tgcttgggcg ccaccgcgct tgggaagatc tcgagctggg cgcgctcgat
     3961 cacgacgccg aacatcttct cgatctgctg atggaccggc gtgcggccgt gatcgcgtcg
     4021 cttgacgacc gcggcgtact tgggatcgac gtagatgtcg gtccaggcca gcggcatgtc
     4081 gaggtcgttg aaccggcgga tcgagctgat gcagtaccag cgcgtgtcgg ccgagcactt
     4141 cagcagcagc gacagctcgc gccccgccac cacctccttg gccccgaacg tgtcgcggaa
     4201 agtgtcgttg gggtagctca gccactcggc cagcgagccg acgctgtggg tgaacaccgt
     4261 cggctgctcc gacgcgatga ccagcgatcc cgcgcgcggc cgacgggtga tgagcccccg
     4321 ttgcgtgatc acgcgcaacg cctcgcgcac ggtgtgccgg ctggcatcga agcgcttgca
     4381 cagcttggcc tcggtcggca acaggctgcc cggcggatag cgtccgctgc ggatctcctc
     4441 gagcagcacg tcggcgatca cgcgatagcg cggcaatgcc ttcttggcgg gacgtcgttc
     4501 catcttcacc ttgcaccggg cacgggcggc tattccccgc cccggccgcc cgactttccg
     4561 tccgccgcgc cgatcacctc gagggcggca tgatgggcct gcaacgaagc gggaatgccg
     4621 cagtacaggg cgacctgcag gagcacttcg cggatttcct ccggcgtgca gccgttggcg
     4681 agcgcgccgc ggagatggac gcggagctcg gccggatggt tgctcgccgc catcatgccg
     4741 atcatcacca ggctgcggac cttgggcgac agcccgggtc gaccccagat gtcgccgtat
     4801 gcatagccgt tgatgatctg ctgcaacggc ttgccgaatt cgccgagcgc gttcatgcgc
     4861 tgctcgaccg ccgcgctgcc gaacatcttc ttgcgacgct tcaagccacg ttgatagagc
     4921 tgctcggtgt ccatcggcgt acctcgtgtg aaaggtgccc gaggtgctct cggagcttgc
     4981 cgacgatatt ttgttcggac aaaatgttca agttgtccga acataatacc aagcggcgtc
     5041 aggccgcgcc gacggcgggt ccatgatcga tgcagcgata gtcggcctcg gctggtgggg
     5101 caagaatctc gtcaccgcgg ttcagggaaa gagcgagcac ctgcgcttcg tccgcggcgt
     5161 cagcgtcgaa ccggatccgg tgcgcgcctt cgccgctcac catggcttgg ccttgtcgac
     5221 cagcctcgcc gaggtattgc gcgaccccaa cgtacgtgtc gtcgtgctgg caacgccgca
     5281 ttcactgcat ccgggccaga tcgtcgccgc ggccgaggcc ggcaaggccg tgttcagcga
     5341 aaagccgctg gcgctcaatc gcgccgatgc gatcgccgcc gtcgaggcct gccggcgggc
     5401 cggcgtgccg ctcggcctcg gggccaacaa gcgcttctgg ccgtcgatgc gcgagctcaa
     5461 gcgggtggtc gcaagcggcg agctcggcga aatactccac gtcgagggcc actacagcaa
     5521 cgagaactcc ggcaagttct tcgctgcctg gcgcgattca cccaatgaag ccccgggcgg
     5581 ggcgatgacc ggcacggcgc tgcacgttct cgatgccttc gtaaacctga tcggaccggt
     5641 gcgccgcgtg aatggccagc tcgtctcccg ccggccgccg cccgacccgc tcgacgcgat
     5701 ttccgtcctg gtggaattcg ccaatggcgc gagcggcgtg ctggcatcga tgagagcgac
     5761 gcccttttac tggcgcgtcc acgccttcgg caccgccggc tccgccgaag caatcggcga
     5821 gaacgacatc gtcgttcgac gcaccggcgg gcgggcccgg cgtgagacgt ttccgcccgt
     5881 cgattcgctg cgcgacgaat tggaggcctt cgccggcgcg gtcgacggaa ggtccgcccc
     5941 gcccatcccg acggtgcaga tgatcgacac cgtcgcggcg ttcgaagcgg tcattcgatc
     6001 ggtcaacggc ggagcgcctt cgacggtcga ggcctacagg cccaattgac gtcgcaaggc
     6061 ttcgcgcctc gtggcgcgcc atcgggatgg ttcgctagat cgtcagcggc gaagagtc
//
LOCUS       DASWGA010000205         3548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2053957, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000205 DASWGA010000000
VERSION     DASWGA010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3548
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2053957"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VF991_04960"
     CDS             complement(<1..248)
                     /locus_tag="VF991_04960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555822.1"
                     /translation="MIAQPAAASRYHALDALRAAMMFLGIYLHATVAYSPVGGWPYKP
                     AQLTTALDSSVGLIHVFRMPVFYVMAGFFAALLLQRYG"
     gene            325..690
                     /locus_tag="VF991_04965"
     CDS             325..690
                     /locus_tag="VF991_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017961078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9555823.1"
                     /translation="MTDSLLVQLRKGVLDLCVLAMLARRDGYAYDIASRLADAIGMGE
                     GTIYPLMRRMQTDGLVRTYLEESSSGPPRKYYQLTKAGHVALAAQKAEWNVFTASVAK
                     VLSDARVAAPAAKTVGGAK"
     gene            687..1265
                     /locus_tag="VF991_04970"
     CDS             687..1265
                     /locus_tag="VF991_04970"
                     /inference="COORDINATES: protein motif:HMM:NF019618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HEX9555824.1"
                     /translation="MTRLEFLDTLRRRLAGLPAAEIDDLVADYATHFADGMAAGRSEA
                     DIAQALGDPMRLARELRAEAGFRRWETERTPGSFFAVLFGFLALVAVDFVFLLPLLGG
                     LALFTLIAAIVLLALCVAGLALLVKLFSWNGLFAVHALAQKLSGLGLLGVGIGGGALL
                     LLMVDYVVRLLGKFARLHYELLNRADAGGAHG"
     gene            1258..2001
                     /locus_tag="VF991_04975"
     CDS             1258..2001
                     /locus_tag="VF991_04975"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HEX9555825.1"
                     /translation="MARTLGWIAVGGLSVGFASLALAYALVGRDLANFLDRDILLAHS
                     CGNDSGKGDAKQRERRLAWEGDDTVEISLPASVRYRGGEGSEVIVRGSPDVIAHVEVR
                     RGRITLDCHRWGGLRDIEVTLPGRAFRRIGLSGSSKLTMDNVSQPDLAFKISGSGTVR
                     VQGTVDHATVSVAGSGDARLADLAMKELTAKISGSGKVEAAPKDAADIKISGSGDVRL
                     LSRPTRLTSHVAGSGRITQASLDPADGKK"
     gene            complement(2022..2453)
                     /locus_tag="VF991_04980"
     CDS             complement(2022..2453)
                     /locus_tag="VF991_04980"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEX9555826.1"
                     /translation="MALALAAARAAGARGEVPIGAVIVGPAGEVLVEAGNRTEELRDP
                     TAHAEMLVIRAAAAKLGAPRLVGCDLYVTLEPCPMCAQAISFARIRRLYWGAPDPKGG
                     GVEHGPRIFDQSTCHHRPELYPGLAEAEAGELLRAFFRERR"
     gene            2529..3245
                     /locus_tag="VF991_04985"
     CDS             2529..3245
                     /locus_tag="VF991_04985"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX9555827.1"
                     /translation="MPRPLIGVTLDAEKPGGYSKFPWYALRQNYLDAIDAAGGLPVAL
                     PHEPDRVGDYLERIDALVVTGGAFDVDPAYYGGGAAHATVITKDRRTAFEFAVTKGAL
                     DQNKPVLGICGGQQLLHVVLGGKLIQHIPDSIAAALAHEQPNPRDEPGHVVKVAHGTR
                     LHDIVGADELSVNSAHHQAAADAPNGVVVNATAPDGVIEGIEAPRYRFCIGVQWHPEF
                     LISEGDAKLFRAFLGAAAAK"
     gene            3242..>3548
                     /locus_tag="VF991_04990"
     CDS             3242..>3548
                     /locus_tag="VF991_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HEX9555828.1"
                     /translation="MSEPERIAKRLARAGLCSRRDAERWIAAGRVKVDGKLLETPAFT
                     VTDQSQIEVDGKPLPGADRARLWRYHKPTGEMVTSRDPEGRRTIFDSLPSGMPRVVTV
                     "
BASE COUNT          599 a         1156 c         1220 g          573 t
ORIGIN      
        1 aagccgtagc gctgcagcag cagggccgcg aagaaccccg ccatgacgta gaagacgggc
       61 atgcgaaaga cgtggatcag cccgaccgaa gaatcgagcg ccgtggtgag ctgcgccggc
      121 ttgtagggcc agccgccgac gggcgaatag gcgacggtgg catggagata gatgccgaga
      181 aacatcatcg ccgcgcgcag ggcatcgagc gcatggtaac gcgaagcggc ggcgggctgg
      241 gcgatcatct ggacaagaga cttacagcat gctaccttgt tttgcaaggt actatgttat
      301 gtgctgtact gaggatgcca tttcgtgact gactcgttgt tggtgcaact gcgcaaaggc
      361 gtgctcgacc tctgcgtgct cgccatgctg gcgcgccggg acggctacgc ctacgacatc
      421 gcgagccggc tggccgacgc catcggcatg ggtgaaggca cgatctatcc cttgatgcgg
      481 cgcatgcaga ccgatggcct ggtcaggacc tatctcgagg aatcgagcag cggaccgccg
      541 cgcaaatact accagctcac caaggcaggc cacgtcgccc tcgccgcgca aaaggcggaa
      601 tggaatgtct ttactgcgtc ggtggcaaag gtgctgtcgg atgcaagggt cgcggcaccg
      661 gccgccaaaa ccgtgggagg cgccaaatga ccaggctcga attcctcgac acgctgcgcc
      721 gccgcctggc gggattgccg gcggcggaga tcgacgatct cgtcgccgac tacgccaccc
      781 atttcgccga tggcatggcg gcgggccgca gcgaggccga catcgcccag gcgctgggcg
      841 acccgatgcg gctggcgcgc gagctgcggg cggaggcggg cttccgccgc tgggagacgg
      901 agcgcacgcc gggcagcttc ttcgccgtac tgttcggctt cctggcgctg gtcgcggtgg
      961 atttcgtgtt cctgctgccg ctgctgggcg gcctcgccct gttcacgctg atcgccgcga
     1021 tcgtcctgct ggcactctgc gtcgcgggcc tcgcgctgct ggtgaaactg ttcagctgga
     1081 acggcttgtt tgccgttcat gccctggcgc agaagctgag cgggctcggc ctgctgggcg
     1141 tgggcatcgg tggcggggcg ctgctgctgc tgatggtcga ctacgtggtg cggctgctcg
     1201 gcaagttcgc tcggctgcac tacgaattgc tgaaccgagc agatgcggga ggcgcacatg
     1261 gctagaactt tgggctggat cgccgtcggc ggcctcagcg tcggcttcgc ctcgctcgct
     1321 cttgcctacg ctctggtggg ccgtgatctg gcgaactttc tggatcgcga catcctcctc
     1381 gcccactcgt gcggcaatga cagcggtaaa ggcgacgcaa agcagcggga gcgccgcctc
     1441 gcatgggagg gtgacgacac agtcgaaatc tccctgccgg ccagcgtgcg ctaccgcggc
     1501 ggcgaaggca gcgaggtgat tgtccgtgga tcgcccgacg tcatcgctca tgtcgaggtt
     1561 cgtcgcggca ggataacgct cgactgtcac cggtggggcg gcttgcgcga catcgaggtc
     1621 accttgcccg ggcgcgcctt ccgcaggatc ggcctctccg gctcgagcaa gctcaccatg
     1681 gacaacgtca gtcagcctga tctggctttc aagatcagcg gcagcggcac ggtgcgcgtc
     1741 caaggcaccg tcgatcatgc gacggtcagt gtcgccggat cgggcgacgc ccgactggcc
     1801 gatttggcga tgaaagagct cacggccaaa atctccggca gcggaaaggt cgaggcagcg
     1861 cccaaggacg ccgccgatat caagatctcc ggctcaggcg atgtccggct gctcagccgg
     1921 cccacgcgct tgaccagcca tgtcgcgggc tctggccgca tcacccaggc ctcgctcgac
     1981 ccggcggatg gaaaaaaata ggcggacgcg gaaggctgct ctcagcgacg ttccctgaag
     2041 aaggcgcgca acagctcgcc cgcctcggct tcggcaagtc ccggatagag ctcgggcctg
     2101 tgatggcagg tcgactggtc gaagatgcgc gggccgtgct cgacaccgcc gcccttggga
     2161 tcgggcgcgc cccaatagag gcgccggatg cgcgcgaacg aaatcgcctg ggcgcacatc
     2221 ggacagggtt ccagcgtgac atagagatcg cagccgacca gccgcggcgc gccaagcttg
     2281 gccgcggcgg cgcggatcac cagcatctcg gcatgggcgg tgggatcgcg aagctcctcg
     2341 gtgcgattgc ccgcctcgac cagcacctcg cccgcagggc ccacgatcac cgcgccgatc
     2401 ggcacttcgc cacgcgcgcc ggcggcgcgg gcggcggcca aggcgagtgc catgggtgaa
     2461 ggtttcgacg catcgggcat gacggtcgca ctatagcgcg gctggctgta cgcgcgtatc
     2521 ttggccgcat gccccgtccc ctcattggag tcaccctgga tgcggaaaag ccgggtggtt
     2581 attccaagtt cccctggtat gcgctgcgcc agaactacct cgatgccatc gatgcggccg
     2641 gcggcctgcc ggtggcgctg ccgcacgagc ccgaccgggt cggcgactat ctcgagcgta
     2701 tcgacgcgct ggtggtgacc ggcggcgcct tcgacgtcga tcccgcctac tatggcggcg
     2761 gggccgcgca tgcgaccgtg atcaccaagg atcgccgcac cgccttcgaa tttgccgtca
     2821 ccaagggtgc acttgatcaa aacaagcccg tgctgggcat ttgcggcggc cagcagctcc
     2881 tgcatgtcgt gctgggcggc aagctgatcc agcacatccc cgactccatc gcggcggcgt
     2941 tggcgcacga gcagcccaat ccacgggacg agccgggcca cgtcgtgaaa gtggcgcacg
     3001 gcacccgact gcacgacatc gtgggcgccg acgagctttc ggtgaacagc gcccatcatc
     3061 aggcagccgc cgatgcgccc aacggcgtcg tggtgaacgc caccgcgccc gacggcgtga
     3121 tcgagggcat cgaggcgccg cgctatcgct tctgcatcgg cgtgcagtgg catcccgagt
     3181 tcctgatctc cgagggcgac gcgaagctct tccgcgcctt cctgggagcg gcagcggcca
     3241 agtgagcgaa cccgaacgga ttgccaagcg gctggcgcgc gcgggcctct gctcgcgccg
     3301 cgatgccgaa cgctggatcg ctgccgggcg ggtgaaggtc gacggcaagc tgctcgagac
     3361 gccggccttc accgtcaccg accagagcca gatcgaagtc gacggcaagc ccctgcccgg
     3421 cgccgaccgc gcgcgactgt ggcgctatca caagccgacg ggcgagatgg tcacttcgcg
     3481 cgatcccgag ggacggcgta cgattttcga ttcgctgccg agtggcatgc cgcgagtggt
     3541 cacggtgg
//
LOCUS       DASWGA010000206         5459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1797665, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000206 DASWGA010000000
VERSION     DASWGA010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5459
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1797665"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..1579)
                     /locus_tag="VF991_04995"
     CDS             complement(74..1579)
                     /locus_tag="VF991_04995"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9555829.1"
                     /translation="MANSSKRSHTIIRGGKLLDIAKRKAVPVDILIRGDTIAEIGRPG
                     LAAPAGATVVDARHRLMHPGLINSHTHGPGNISKGLHDRWSLELLLTGARWANIGINT
                     EDKYLSAMIGAAEMVMKGCTAAYDLAHEYPLPSVEGLSAMAKAYEEVGMRAVLAPMVA
                     DLSFFEAIPGLMERLPPALQKEADTFRHEPWKATTRQMRKALQKWPFEMVHLALAPTI
                     PHHCTDAFLASCRDLAKEYDVGIQSHVAESKVQVIAGYERYGTSLAAHMDKMGLVNDR
                     FTVAHGVWLDDDDMKRLGDRGASVAHNPGSNMRLGSGIADVRGMLDRKINVGIGTDGA
                     NCSDNQNMYEATRLASLVSKVQGPDWQRWLGTDEALLAATEGSARALGLHKQIGKIAP
                     GYKADIVFLDLAHINWVPCNDPTNQLAHTEDGNAVDSVMIGGRMVVEHRRVTTVDVAA
                     LAREAEAARRRLADVNAATKELCERLAPVVGRFCPGLARVPYRVARYVSGP"
     gene            1655..2062
                     /locus_tag="VF991_05000"
     CDS             1655..2062
                     /locus_tag="VF991_05000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020608033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX9555830.1"
                     /translation="MKLEGGCYCGQVRYVAEGEPTLKAQCHCRECQYISGGSPNMFLL
                     MPTEGFRYTQGTPKQFARSDLERPVTREFCGDCGTHLTTRRPGLPAVILKVGTLDDPS
                     LFGGPQMAIYTVDKQAFHQIPEGLPTFERLPKR"
     gene            complement(2123..2326)
                     /gene="rpsU"
                     /locus_tag="VF991_05005"
     CDS             complement(2123..2326)
                     /gene="rpsU"
                     /locus_tag="VF991_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEX9555831.1"
                     /translation="MQVLVRENNVDQALRVLKKKMQREGIFREMKLRRNYEKPSERRA
                     RERAEAIRRTRKLMRKRMEREGY"
     gene            2518..3108
                     /locus_tag="VF991_05010"
     CDS             2518..3108
                     /locus_tag="VF991_05010"
                     /inference="COORDINATES: protein motif:HMM:TIGR02396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COQ9 family protein"
                     /protein_id="HEX9555832.1"
                     /translation="MADAVAAEAAFDGWTRTALSAASRQLALPAGEADRLFPGGPVQV
                     LTYLSERSDLRTVADMEKEGVGSLKIRDRITKAVRIRLERHAGGREAVRRALALLSLP
                     FNAGLALKLLYKTVDAMWYAAGDTSTDFNFYTKRATLAGVYSSTLLYWLADRSPGSEA
                     TWGFLDRRIDDVMKIEKLKSQVRSWTGSTTRAASRR"
     gene            complement(3097..4170)
                     /locus_tag="VF991_05015"
     CDS             complement(3097..4170)
                     /locus_tag="VF991_05015"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEX9555833.1"
                     /translation="MTSPQTLPPGSTIGILGGGQLGRMTALAAARLGYRCVVYAPEEH
                     SIAGDVAAGHVSGAYDDKAALARFANQVDVITYEFENVPEAAVTQCQKHKPVRPGVKP
                     IHVAQHRLREKEFFKALGIGTADYQPIRSEAEIAAASAFPGILKTCSEGYDGKGQVRV
                     ADRAALAAAWQKLGRRECVLEALVDFLCEIAVIVARGLDGTTRYFPIGLNDHRDGILR
                     TTTVPSGLPAGTLAAAERFGTDLADGLELVGLVALEMFVTRDGRVLANEMAPRPHNSG
                     HWTIDACATSQFEQLVRAICGLPLGPVDVLAPSRMLNLIGEEANDWPRYLADPAARLH
                     LYGKATPRPGRKMGHVTYIKSPS"
     gene            complement(4170..4694)
                     /gene="purE"
                     /locus_tag="VF991_05020"
     CDS             complement(4170..4694)
                     /gene="purE"
                     /locus_tag="VF991_05020"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014329750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEX9555834.1"
                     /translation="MAKSTAKRRPLVGLIMGSQSDWTTMRYAAETLEALGVPFEARII
                     SAHRTPKRMMAYASAAKGRGLKVIVAGAGGAAHLPGMTASLTPLPVLGVPVESAALKG
                     QDSLLSIVQMPVGIPVGTLAIGRAGAINAALLAASIVGLGDAKIMVAVERWRARQTGA
                     VARAPSDEPAASPR"
     gene            complement(4697..4918)
                     /locus_tag="VF991_05025"
     CDS             complement(4697..4918)
                     /locus_tag="VF991_05025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HEX9555835.1"
                     /translation="MSNPTSDPLDAEAIKAKLEALKSEHRDLDDVIERLLEKPPFDQL
                     QLQRLKKRKLGLKDQILKLESQLIPDIIA"
     gene            5013..>5459
                     /locus_tag="VF991_05030"
     CDS             5013..>5459
                     /locus_tag="VF991_05030"
                     /inference="COORDINATES: protein motif:HMM:TIGR02444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02444 family protein"
                     /protein_id="HEX9555836.1"
                     /translation="MPHPFWNFSLELYAGEGVAEACLDLQERRGCDVNILLFCCWLGA
                     SGRSTLSADRLRTILKASDVWQAEIVRPLRQVRRLLKDRPWPEALPETVDAVRRRVAD
                     AELAAEYAEQIKLASLHTPPADRDRPLEKRLRAAVVNLAVDAVCLGV"
BASE COUNT          868 a         1799 c         1855 g          937 t
ORIGIN      
        1 atcgccgact gcttcaacag ccaggactac caggagggcg tgaaggcgtt ctcggagaag
       61 cgccgcccag agttcaaggg ccgctgacgt accgcgcgac gcgatagggc acccgggcca
      121 gaccggggca gaaccggccg accaccggcg ccagccgctc gcagagctcc ttcgtcgccg
      181 cgttgacgtc cgccaggcgc cgtcgcgcgg cctccgcctc gcgcgcgagc gcggcgacgt
      241 cgacggtggt gacccgccgg tgctcgacca ccatgcggcc gccgatcatg acgctgtcca
      301 ccgcgttccc gtcctcggtg tgggcgagct ggttggtcgg atcgttgcag gggacccagt
      361 tgatgtgcgc gaggtcgagg aagacgatgt cggccttgta gcccggcgcg atcttgccga
      421 tctgcttgtg caggccgagc gcgcgggcgc tgccctcggt ggcggcgagc agcgcctcat
      481 cggtgccgag ccagcgctgc cagtccggac cctgaacctt cgagaccagc gacgcgagcc
      541 gcgtcgcttc gtacatgttc tgattgtccg agcagttcgc gccatcggtg ccaataccga
      601 cattgatctt gcggtccagc atgccgcgca cgtcggcgat gccgctgccc agccgcatgt
      661 tggaaccggg attgtgcgcc accgaagcgc cacggtcgcc caagcgcttc atgtcgtcat
      721 cgtcgagcca cacgccgtgc gccacggtga agcggtcgtt gaccaggccc atcttgtcca
      781 tgtgtgccgc gagcgacgtg ccgtagcgct cgtagccggc aatcacctgc accttcgatt
      841 ccgcgacatg gctctggatg ccgacgtcgt attccttggc gagatcgcgg caggacgcca
      901 ggaaggcgtc cgtgcaatgg tgtgggatgg tcggcgcgag tgccagatgg accatctcga
      961 acggccactt ctgcagggcc ttgcgcatct gccgggtggt ggccttccag ggttcatggc
     1021 ggaaggtgtc ggcctccttc tgcagcgccg gcggcaggcg ctccatcagg ccggggatcg
     1081 cctcgaagaa ggaaaggtcg gcgaccatcg gcgccagcac ggcgcgcatg cccacttcct
     1141 cgtaggcctt ggccatcgcc gacagtcctt cgaccgaggg caggggatat tcatgggcga
     1201 ggtcataggc tgcggtgcag cccttcatca ccatctcggc ggcgccgatc atggcggaga
     1261 ggtacttgtc ctcggtattg atgccgatgt tggcccatcg cgcgccggtc agcagcagct
     1321 cgagggacca gcggtcgtgc aggcccttgg agatgttgcc cggtccatgg gtgtgggaat
     1381 tgatcaaccc gggatgcatc agcctgtgcc tggcatcgac cactgtggcg ccggcggggg
     1441 cggcgagccc cggccggccg atctcggcga tggtgtcgcc cctgatcagg atgtcgacag
     1501 gaacggcttt gcgcttggca atgtctaaaa gcttgccgcc gcggatgatg gtgtgggaac
     1561 gtttggatga gtttgccatg acggcagtct cgcaaacaaa gtgccaccac ggcgacggga
     1621 atctcgtgtt cccgggcgac atcggaagga tgccatgaaa ctggaaggcg gatgctattg
     1681 cggtcaggtg cgctacgtgg ccgaaggcga gccgacgctg aaggcgcaat gccactgccg
     1741 cgaatgccaa tatatcagcg gcggctcacc gaacatgttc ttgctcatgc caaccgaggg
     1801 cttccgctat acccagggaa cgcccaagca gtttgcccgc agcgatctcg agcgccctgt
     1861 gacacgggaa ttctgcggcg actgcggcac gcatctgacg acgcggcggc cgggtttgcc
     1921 ggccgtgatc ctgaaggtcg gcacgctcga tgatccgagc ctttttggcg gcccgcagat
     1981 ggcgatctac acggtcgaca agcaggcctt ccatcagatc cccgagggac tgccgacttt
     2041 cgagcgactg ccgaaacgat agcgcgccaa acaaaaaccc ccggggttac cgggggtcgt
     2101 cttcgttccg cgaaggagag ggctagtaac cctcgcgctc catgcgcttg cgcatcagct
     2161 tgcgggtccg gcggatggct tctgcccttt cgcgggcgcg gcgctcggag ggcttttcat
     2221 aattgcgacg gagcttcatc tctcggaaga tcccttcgcg ctgcatcttc ttcttcagga
     2281 cacgcagcgc ctgatcgacg ttgttttcac gaacgagaac ctgcacttcg atcgcttcct
     2341 tccatgcgtg gtggggcgcc ccggaacggc tccgggggca attaggaggc ggcgtaggta
     2401 tcacagggca gaaccgttgg aaagggggtg tggaaccccg gttcgacgcc tatatcttcg
     2461 ctaatgagcg ccgaaaatag cccccaaagc gaccctgacg ccccgctgcg cgaccgtttg
     2521 gccgacgccg tcgccgccga ggcggccttc gacggctgga cccgcaccgc cctgtcggcc
     2581 gcgtcgcgcc agctcgcgct gccggcgggc gaggccgacc gcctgttccc gggcggcccg
     2641 gtccaggtcc tgacctacct cagcgagcga tccgatctgc gcacggtcgc ggatatggag
     2701 aaggaaggcg tcggcagcct gaagatccgc gaccgcatca cgaaggccgt gcgcatccgc
     2761 ctggagcgtc atgccggcgg gcgcgaggcg gtgcgccgcg cgctggcgct gttgtcgctg
     2821 ccgttcaatg cagggttggc gctgaagctt ctgtacaaga ccgtggacgc catgtggtac
     2881 gccgcgggcg ataccagcac cgatttcaac ttctacacca agcgcgccac gctggcgggt
     2941 gtctattcct cgaccttgct ctactggctg gctgaccgct cgcccggcag cgaggcgacg
     3001 tggggcttcc tcgaccgccg catcgacgat gtcatgaaga tcgaaaagct gaagtcacag
     3061 gtgagatcct ggaccggctc gacgacacgg gcggcttcac gacggtgact tgatataggt
     3121 gacgtggccc atcttgcggc ccggccgcgg cgtcgccttg ccgtagaggt gcagccgtgc
     3181 cgccggatcg gcgagatagc gcggccagtc gttggcctcc tcgccgatca ggttcagcat
     3241 gcgcgaggga gcgagcacgt cgacggggcc gagcggcagg ccgcagatcg cgcgcacgag
     3301 ctgctcgaac tggctggtgg cgcaggcatc gatcgtccaa tggcctgaat tgtgcggccg
     3361 gggcgccatc tcgttggcga gcacgcggcc gtccctggtc acgaacatct cgagcgcgac
     3421 caggccgacc agctcgaggc cgtccgccag atcggtgccg aagcgctccg ccgcagccag
     3481 tgtcccggcc ggcaggcccg agggcaccgt cgtggtgcgc aggatgccat cgcggtgatc
     3541 gttgagcccg atcgggaagt agcgcgtggt gccatcgagg ccgcgcgcca cgatcaccgc
     3601 gatctcgcac aggaaatcga ccagcgcttc gaggacgcat tcccgccggc cgagcttctg
     3661 ccaggccgcc gcgagcgcgg cgcggtcggc gacgcggacc tggcccttgc cgtcatagcc
     3721 ctcgctgcag gtcttcagga tgccgggaaa cgccgaggcg gcggcgatct cggcctcgct
     3781 ccggatcggc tggtagtccg ccgtgccgat gccaagcgcc ttgaagaatt ccttttcgcg
     3841 cagccggtgc tgggcgacat ggatgggctt tacgcccggc cgcaccggtt tgtgcttctg
     3901 gcactgggtg acagccgcct cgggcacgtt ctcgaattcg taggtgatga catcgacctg
     3961 gttggcaaag cgcgccaagg cggccttgtc gtcgtaggcg ccactgacgt ggccggccgc
     4021 gacatcgcct gcaatcgaat gctcctcggg cgcatagacg acgcagcgat agcccagccg
     4081 cgccgcggcc agcgcggtca tgcggcccaa ctggccgccc cccaggatgc cgatggtcga
     4141 acctggcggc agggtctgcg gtgacgtcat caacgaggag atgctgcggg ctcgtccgac
     4201 ggcgcgcggg cgaccgcgcc ggtctggcgc gcccgccaac gctcgaccgc caccatgatc
     4261 ttggcgtcgc caagaccaac gatgctggcg gccagcaagg cagcattgat cgcgccggcc
     4321 cgaccaatgg cgagcgtgcc caccgggatg ccgaccggca tctggacaat ggaaagaagg
     4381 ctgtcctgcc ccttcagcgc cgcgctttcg accggcacgc ccagcaccgg cagcggcgtc
     4441 agcgaggccg tcatgcccgg caggtgggcg gccccgccgg cgccagccac gatcaccttc
     4501 aagccgcggc ccttggcggc cgaggcatag gccatcatgc gcttgggcgt gcggtgagcg
     4561 gagatgatgc gggcttcgaa cggcacgccg agcgcctcca gggtttcggc ggcgtagcgc
     4621 atggtcgtcc agtccgactg gctgcccatg atcaggccga ccagcgggcg gcgtttggct
     4681 gtggattttg ccatgctcag gcgatgatat cgggaatcaa ctggctttcc agcttgagga
     4741 tctggtcctt gagcccgagc ttgcgctttt tcaggcgctg aagctggagc tggtcgaagg
     4801 gcggcttctc gagcaggcgt tcgatcacgt cgtcgagatc gcgatgctcg cttttcaacg
     4861 cttccagctt ggccttgatc gcctcggcgt ccagcggatc cgaagtcggg ttgctcatgc
     4921 tcggcgcact cgtccaggcg ggctagccac gtcgccctcg gccgtgtacc ccttcgcccg
     4981 cccaaaggga agcgctcaag ctgtcggatt ttctgcccca tccgttctgg aatttctcgc
     5041 tggaactcta tgccggcgag ggggtggccg aggcctgcct cgacctgcag gagcggcgcg
     5101 gctgcgacgt gaacatattg ctgttctgtt gctggctcgg cgcctcgggc cgctcgaccc
     5161 tgagcgccga ccggctgcgg acgatcctga aggcaagcga cgtctggcag gccgagatcg
     5221 tgcgtcccct gcgccaggtg cgccggctgc tcaaggaccg gccgtggcct gaagcgctgc
     5281 ccgagaccgt cgatgccgtg cgccggcgcg tcgccgatgc cgagctcgcg gccgagtacg
     5341 ccgagcagat caaacttgcc agcctgcaca cgccgccggc cgaccgcgac cgcccgctgg
     5401 aaaagcgtct gcgcgcggcg gtggtcaatc tcgcagtcga tgccgtgtgc ctgggcgtc
//
LOCUS       DASWGA010000207         2288 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1290716, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000207 DASWGA010000000
VERSION     DASWGA010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2288
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1290716"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VF991_05035"
     CDS             <1..184
                     /locus_tag="VF991_05035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555837.1"
                     /translation="KGFFKMCLDKLVAEGLSPSQAAEVLSTITGALVVANALGDTAAY
                     DRATSNLLRQREVAPA"
     gene            complement(247..753)
                     /locus_tag="VF991_05040"
     CDS             complement(247..753)
                     /locus_tag="VF991_05040"
                     /inference="COORDINATES: protein motif:HMM:NF020909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 domain-containing protein"
                     /protein_id="HEX9555838.1"
                     /translation="MYYAAVSQCTQAMRNLETWLDKAEQHAAAKKFDVGVLLSDRLVP
                     DMQPFIYQVQSACDYVKAAAAWLSGQTPPKHEDNEQTIEEVRARIRKTVAFAESVKEA
                     QFADAAARRVSLSWAPGKVLGGKDYLLQMSIPNIYFHLAMAYAILRHNGVDIGKMDFL
                     GPINWIDA"
     gene            complement(797..1570)
                     /locus_tag="VF991_05045"
     CDS             complement(797..1570)
                     /locus_tag="VF991_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008531210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555839.1"
                     /translation="MRFQDKVAIVTGGGSGMGKETAARFVAEGGSVVINGRNAAKAEA
                     AAREIDPPGTRVFVHAGDVSLPTTGETLVKLALERFGRLDVLFNNAGVFAPKPFLDVT
                     EAEYDRFLDSILKGTFFTAQAAAKAMKAAGRGGAIVQTGSMWGLQAIGATPSSAYSAA
                     KAGVHALVKNLAIELAPDKIRVNAIAPAVIETPVYDTFLTPEQVKAVLPTFNAFHPLG
                     RNGQVADVAEALLFLASDQASFITGVVLPVDGGVMAGRQ"
     gene            complement(1691..2288)
                     /locus_tag="VF991_05050"
                     /pseudo
     CDS             complement(1691..2288)
                     /locus_tag="VF991_05050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934223.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
BASE COUNT          399 a          736 c          725 g          428 t
ORIGIN      
        1 gaagggcttt ttcaagatgt gcttggacaa gctcgttgcg gaagggctct cgccaagcca
       61 ggcggccgaa gtgttgtcga ccatcacagg cgccctggtc gttgccaatg cgctcggcga
      121 taccgccgca tatgaccgcg ccaccagtaa cttgctgcgg cagcgcgagg tagcaccagc
      181 ctgaaaccct cccggtcgcg cggggccctc cgcgagcccc cggcggctga gtccacgagg
      241 tcacgatcag gcgtcgatcc agttgatcgg cccgaggaag tccattttcc cgatatcgac
      301 gccgttgtgg cggaggatgg cgtaggccat cgcgagatgg aaatagatgt tcgggatcga
      361 catctgcagc aggtagtcct taccgccgag aaccttaccg ggcgcccagg agaggctaac
      421 cctgcgtgcg gcggcatcgg caaactgcgc ctccttcacg ctctccgcaa aggcgacggt
      481 cttgcggatg cgggcgcgca cctcctcgat cgtctgctcg ttgtcttcgt gcttcggcgg
      541 cgtctgcccg gagagccagg cggcggccgc cttgacgtaa tcgcaggcgc tttgcacctg
      601 gtagatgaag ggctgcatat cgggcacgag gcggtcgctc agcagcacgc cgacatcgaa
      661 tttcttggcg gcggcatgct gctcggcctt gtcgagccag gtctcgaggt tcctcatagc
      721 ctgcgtgcat tgcgagaccg cggcgtaata catggctccc tccttcatgt cccggatgag
      781 gtgtttgggc tggtgatcac tgccggccgg ccatgacgcc gccatcgacg ggcaacacga
      841 cgccggtgat gaagctcgcc tgatcggacg cgaggaatag cagcgcttcc gccacatccg
      901 ccacctggcc gttgcggccg agcgggtgaa acgcgttgaa ggtcgggagc acggccttta
      961 cctgctcggg tgttagaaac gtgtcgtaaa cgggcgtctc gatcaccgcg ggcgcgatcg
     1021 cattcacgcg gattttgtcg ggcgccagct cgatcgcgag attcttgacc agcgcatgga
     1081 caccggcctt tgccgccgaa taggccgaag acggcgtcgc gccgatcgcc tgcaggcccc
     1141 acatggagcc ggtttgcacg atcgctccgc cgcggccggc ggccttcatc gccttcgccg
     1201 cggcctgcgc cgtgaagaat gtgcccttga gaatgctgtc gaggaagcga tcatactcgg
     1261 cctcagtgac gtcgagaaac ggcttcggcg cgaaaacacc ggcgttgttg aacagcacgt
     1321 cgaggcggcc gaagcgctca agcgctaatt tcaccagggt ttcgcccgtc gtcggcagcg
     1381 agacgtcgcc cgcatggacg aagacgcgcg tccctggcgg atcgatctcg cgcgcggccg
     1441 cctcggcctt ggcggcattg cggccgttga tgacgaccga accgccctcc gcgacgaacc
     1501 gggccgcggt ctctttgccc atgcccgaac caccgccggt gacgatcgca accttatcct
     1561 ggaaccgcat aacttcctcc atctacctat cgataggttt atagaggcga caaataagcc
     1621 tggagctttg gcgcgtcaag gcctatctat cgatagagag aagcggagtg ggcggtgagt
     1681 gagagaactg ccgggcgtcg gggtcggtca gcgagacctg ccggtcgggc gcgtcctgaa
     1741 ccgtctgctc catctctttc aaggccagca tctgtcgacg caggccggca atcttctcct
     1801 tcaatcggcc cgacttggcc tcggcgatat cgccctcttc gcggtcggcc tggtccagcg
     1861 ccctcaggta acgcgcgatg ctggcgtcga cctgctccat ccgcccgctg actttggcta
     1921 ccgtgtagtt cttgtcgcga ttgttcactg ctttgaactt gctgccatcg atcgcaacaa
     1981 cggcacgggt gaagaggtgg agccgacggc aaagctcgac gaactgcccg cacaccgccc
     2041 ggatcgccgc gccattgtcc cggcggaagt cggcaatcgt cttgaagtcg ggcgccaacc
     2101 gcccggtcag ccacatcagc tcgatattgc gttgcgcttc ccgttcgagc cgccggctcg
     2161 actgcaggcg gttgagatag ccgtagaggt agatcttcag caacgtcgag ggatggtagg
     2221 ctggccggcc cgtcgccgcc ggcgtcatcc ctgaaaaccc caaggcggca aggtccaact
     2281 cgtcgatg
//
LOCUS       DASWGA010000208         2412 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_530188, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000208 DASWGA010000000
VERSION     DASWGA010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530188"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /locus_tag="VF991_05055"
     CDS             <1..579
                     /locus_tag="VF991_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9555840.1"
                     /translation="FPPKDLREFVTYVKANVATLNMAHAGVGSVSFTTCLLLNSILGV
                     KPASIPFNGTGPALTALISGQVDYMCDQIVNLVQQVQGGQIKAYAIGTAERSPALPDV
                     PTSREAGLPEFQAQAWNALFAPKDTPQPILDKLTDALDKALDDEQTRKRLLELGSVLP
                     DKAGRGQQALAALVKSEIARWTPIIKAAGPTD"
     gene            680..1474
                     /locus_tag="VF991_05060"
     CDS             680..1474
                     /locus_tag="VF991_05060"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEX9555841.1"
                     /translation="MRQYHDLLERILADGAEKHDRTGTGTLSVFGHQMRFDLAHGFPL
                     TTTKKLHLRSIVHELLWFLAGDTNVKYLNEHGVTIWDEWADASGELGPVYGRQWRSWP
                     TPDGGVIDQIANVVSAIRRNPDSRRLIVTAWNPVDVDKMALPPCHCLFQFYVADGRLS
                     CQLYQRSADAFLGVPFNIASYALLTLMVAQVAGLDAGEFVHTLGDAHLYLNHLEQARL
                     QLSRAPRPLPKMTLNPAVTDLFAFHYEDFSLQGYDPHPHIKAKVAV"
     gene            1498..2037
                     /locus_tag="VF991_05065"
     CDS             1498..2037
                     /locus_tag="VF991_05065"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEX9555842.1"
                     /translation="MEVVLVAAVADNGVIGRGGALPWRLKSDMLRLRALTWGKPIVVG
                     RTTYLSFTKQPLPGRTNIVVSRNQNFAASGALVAASLEAALEAARGDALRRAADAIIV
                     LGGADIYAQTMAIADRLVITRVHLEPDGDAKFPAIDPEIWRETQRSEHRAGPDDEASF
                     TTLTYERRAALDGRADGGH"
     gene            2174..>2412
                     /locus_tag="VF991_05070"
     CDS             2174..>2412
                     /locus_tag="VF991_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflK N-terminal
                     domain-containing protein"
                     /protein_id="HEX9555843.1"
                     /translation="MPWSNQGGGPWGSGGGGKGPWGSGQQPSGPTPPDLEEFLRRSQD
                     KLRTVLPGGNLGGRGIVLILLAAIAIWGFSGFFRV"
BASE COUNT          409 a          815 c          787 g          401 t
ORIGIN      
        1 tttccgccga aggacctcag ggagttcgtg acttacgtca aggcgaacgt cgccacgctg
       61 aacatggcgc atgccggcgt cggatcggtg tcgttcacga cctgcttgct gctcaactcg
      121 atcctgggcg tgaagcctgc gtcgatccca ttcaacggaa ccggcccggc gctgacggct
      181 ttgatctccg ggcaggtcga ctacatgtgc gaccagatcg tcaatctcgt gcagcaggtg
      241 cagggcggcc agatcaaggc ctatgccatc ggcacagccg agcgcagccc ggccctgcct
      301 gacgtgccca ccagcaggga agccggcctg cccgaattcc aggcccaggc ctggaacgcg
      361 ctcttcgccc cgaaagacac gccccagccc atcctcgaca agctcaccga tgcgctcgac
      421 aaggcgctcg acgacgaaca gacgcgcaaa cgactgctgg agctggggag cgtgctcccg
      481 gacaaggcgg gacgtgggca gcaggccctc gccgccttgg tcaagagcga gatcgcgcgc
      541 tggacgccga tcatcaaggc ggccggcccg accgactgac gcttgtattc acaagtcgtg
      601 ctgcacattt ccccgacggc ggggagggcg gtagactccg ctcgccgact cggctcgttg
      661 ccgcctgagg agcgcagcca tgcgccagta ccacgacttg ctggaacgga ttctcgccga
      721 tggcgccgag aagcacgatc ggaccggcac tgggacgcta tcggtgttcg gtcatcagat
      781 gcgcttcgac ctggcgcacg ggtttccgct caccaccacc aagaagctgc acttgcgatc
      841 gatcgtccac gagctgctct ggttcctcgc cggcgacacc aacgtcaaat atctcaacga
      901 gcatggcgtc accatttggg acgagtgggc ggatgcgagc ggcgagctcg gaccggtcta
      961 tggccggcaa tggcgctcct ggccgactcc cgacggcggc gtgatcgatc agatcgccaa
     1021 cgtggtgtcc gccatccgcc gcaatccgga ttcgcgccgc ctcatcgtca cggcctggaa
     1081 tccggtcgat gtcgacaaga tggcgttgcc gccgtgccac tgcctgtttc agttctacgt
     1141 cgccgacggt cggctctcct gtcagctcta ccagcgctcg gccgacgcct tcctcggcgt
     1201 gccgttcaat atcgcctctt atgcgctgct gacattgatg gtggcgcagg tggccgggct
     1261 tgacgccggc gagttcgtgc acacgctcgg agacgcccat ctttatctca atcatctgga
     1321 gcaggcgcgg ctgcagctct cgcgcgcgcc gcggccgctg cccaagatga ccctcaatcc
     1381 ggccgtgacc gatctcttcg ccttccacta cgaggatttc tcgctccaag gctacgatcc
     1441 ccacccgcac atcaaggcca aggtggcggt gtgagcgggc cgcgtgcggg atcgcggatc
     1501 gaagtcgttc tcgttgccgc ggttgccgac aacggcgtga tcgggcgggg cggcgcgctg
     1561 ccgtggcggc tcaagtccga catgctgcgg cttcgcgccc tgacctgggg caagccgatc
     1621 gtggtggggc gaacgaccta tctttccttc accaagcagc cgcttccggg ccgcaccaac
     1681 atcgtggtca gccgcaacca gaattttgcc gcgtccggcg cgctggtcgc ggcgagcctc
     1741 gaggccgcgc tggaagcggc gcgcggcgat gcgctgcgcc gcgcggcgga tgcgatcatc
     1801 gtgctgggcg gagcggacat ctacgcgcaa acaatggcca tcgccgatcg gctggtgatc
     1861 acccgcgtgc accttgagcc ggacggcgat gcgaagtttc cggccatcga tccggagatt
     1921 tggcgggaaa cgcaacgcag cgagcatcga gccggacccg acgacgaagc gagcttcacc
     1981 acgctcactt atgaacggcg cgcagcgctg gacggccggg cggatggtgg gcactaatcg
     2041 gggatgcaag gccatgcgcc gtcgcgccgc acgcgcttca gccgcgttgt aacgcggtga
     2101 cgcctcccct ataaccccag caaatcgaaa caggcgcgtc ggcccgtagg ccgatgcagc
     2161 gaggaggcag tcgatgccgt ggagcaatca gggcggcggg ccatggggat cagggggcgg
     2221 aggtaagggc ccctggggct cgggccagca gccatcgggc ccgacgccgc ccgatctcga
     2281 ggaattcctg cggcgcagcc aggacaagct gcgcaccgtg ctgccgggcg gcaatctcgg
     2341 cggccgcggc atcgtcctga tcctgctcgc tgccatcgcc atctggggct tctccggctt
     2401 cttccgggtc ga
//
LOCUS       DASWGA010000209        10867 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1165528, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000209 DASWGA010000000
VERSION     DASWGA010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10867
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1165528"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..844)
                     /gene="pncA"
                     /locus_tag="VF991_05075"
     CDS             complement(104..844)
                     /gene="pncA"
                     /locus_tag="VF991_05075"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HEX9555844.1"
                     /translation="MPVTAAPHLSRRLFLGSAAAACLAAGLDGGRSARAAGTIKPDAK
                     SALIVVDVQNCFVDGGTLPVKGGAEVVPVINKLAGSFENIVVTQDWHTPGHASFASVH
                     SGKKPFETTTMPYGTQVLWPDHCVQGSDDAALHKDLKLPTATLIIRKGFHKDVDSYSA
                     FEEADRKTGTGLAGYLKERGITTVFVTGLATDFCVAWTALDARKLGFATYVIEDATRA
                     IDLNGSLAAAWKQMTDAGVKRIQSSDIA"
     gene            980..1168
                     /locus_tag="VF991_05080"
     CDS             980..1168
                     /locus_tag="VF991_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004377199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6726 family protein"
                     /protein_id="HEX9555845.1"
                     /translation="MTDRIRPHRLLGLMLLLAAAASLAGCGVVAAPVRATSAAVKVVP
                     GAGDVVAAPLDVTANTID"
     gene            complement(1183..1971)
                     /locus_tag="VF991_05085"
     CDS             complement(1183..1971)
                     /locus_tag="VF991_05085"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555846.1"
                     /translation="MTTNDNWGWRARIGLFIVGNEAVPEAEWWAMAPPGVSVHAARVT
                     ARAPWARWRDDRKGVEPEEDLLHGCRQFAAMRLSAVVVAHSSSSLLGGKGWDEATVAS
                     LSPLLGTGVIVTTNGLDTQAALRASGVRRPFLVLPPWFNDETVAAGLRYYADHGFEPA
                     GHLRYDPGRKWRDLPPGELVGHGMGFEQEIEPLYAQIKAACPPGADGVLIAGTGFRCV
                     AILEALEQDLKRPVLSANQASLWHCLRSAAVHTQIAGYGHLLRL"
     gene            complement(1991..2356)
                     /locus_tag="VF991_05090"
     CDS             complement(1991..2356)
                     /locus_tag="VF991_05090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555847.1"
                     /translation="MLKVALVGALAGILVAGTVQAEPVVYSWAGYGVNVPDSSKCPTY
                     KMTIDVTVDGNQVKGRFQQEGRPERTFQTTLMKDGAIKTAAMVGGNNMMEVFGQIKEG
                     DNKIMLNGYCKFGGPLTKK"
     gene            complement(2372..3154)
                     /locus_tag="VF991_05095"
     CDS             complement(2372..3154)
                     /locus_tag="VF991_05095"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9555848.1"
                     /translation="MKSRFLTLKPSKTRIEVVEAGKGRDLLYLHGAGGHMPGDPLIAA
                     LATKYRVVAPLLPGYGQSSGEDGFRDMLDVTLHGLDVLEALKLSKPIVVGHSMGGMIA
                     AEMAAIAHTEIARLCLLAPAGLWLDDHPVADIFSKLPYELPGLLFHDAEAGQKLLTTG
                     GNMEDPEFLKQFLVMNARRLGMAGKILFPIPDRGLAQRLHRITAKTLVVWGREDVLIP
                     PVYGDAFKKAISKSKLVRIAKAGHAVGQEKPAAVLRAIRDFF"
     gene            complement(3300..4535)
                     /locus_tag="VF991_05100"
     CDS             complement(3300..4535)
                     /locus_tag="VF991_05100"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9555849.1"
                     /translation="MKFTWFHLMPWPHMPDDFRQKHRSVWVDLPSRMYEPELGHGIYH
                     QYLDQLEFAESVGFDGIGVNEHHANAYGLMPSPNIMAATLTRRTSKAALVVLGNSIAL
                     YNPPLRVAEELAMLDVLSGGRLIAGFPVGTSMDTNYAYGTIPALTREKYAEAHDLIRK
                     AWAADEPFAFNGRYTKLRYVNCWPKPIQRPAPPIFIPGGGSVETYDFCIDNTYSYSYL
                     SYSGYLRAKLLMEGYWKRVAERKVDESPYRAGFAQVICVADTDAEAEKLYWPHVSYFY
                     NRCLHVYPGFADAPGYRTVKTIQTGALSQFTQAAVRNYPSMTWKDLVDGRYIVAGSPE
                     TVRQQMEELIKTLRVGNIFCLLHVGNMPDDKVRHSTRLFAEKVMPHLRNLWPDWNNHD
                     DRFWTHPMNERVPMKVAAE"
     gene            4707..5750
                     /locus_tag="VF991_05105"
     CDS             4707..5750
                     /locus_tag="VF991_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntG family PLP-dependent aldolase"
                     /protein_id="HEX9555850.1"
                     /translation="MQNRFIDLYSDTKTKPSAGMRKAMADADVGDEQKMEDPTVNRLR
                     ERVCALLGKEDAVFLPSGTMANQISIRVHCRLGDEVIADRTAHIINAETGGPAANSGV
                     MIRAIEGPNGVFTGEQVKAALRDPNSRNAPRSRLVSIENTSNGGFGTVWPLATMQGVA
                     KVARAAGVALHMDGARLCNASVKSGIKASDYGACVDSLWLDYTKGLGAPVGASLAGSK
                     DFIKEAWRQKQMLGGSMRQSGVIAAAALYALDYNWDRLAEDHANARHLSEGIANIKGL
                     EIDVPRMETNLVFFEVKKPGWTAAKLVEACKESGVGIGANTATRIRAVTHLDVNRADI
                     DTALKVISDALAA"
     gene            complement(5769..6401)
                     /locus_tag="VF991_05110"
     CDS             complement(5769..6401)
                     /locus_tag="VF991_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX9555851.1"
                     /translation="MDYALVLISVFAIFIPALILPGPDFVAVVRSSMTRGTRAGLLTT
                     LGVSMGLCLYATLSLLGLSAILAEYQWLTWTVRVLGGSYLIFLGIKLLRARPQVIELD
                     QATRPVGKRAILFGFLVTLTNPKAIVLFASVFATAVTASTPLWLMGLMIGLVTASSLI
                     WYSCVSLFMSSGPVIRRFQRARHWIERAAGVCFIGLGGKVLADAGNPISP"
     gene            6482..8776
                     /locus_tag="VF991_05115"
     CDS             6482..8776
                     /locus_tag="VF991_05115"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9555852.1"
                     /translation="MNVPLKLGQPILRREDRRFLTGRGRYADNTAPADALAVLFVRSP
                     HAHARLIGIDKKAALASPGVAAIYTADDLLADKVGHLPAISEIKDGAGNRHREPLHLP
                     MPTGKVRHVGDVVAMVVAKTLDQARDAAELLEIDYEALPAVVTVAQALAPGAPLVHDD
                     VPGNLMCRWGRGDVAATDAAFVGAAHVSTLTIRSPRQIVHYMETRAAWSIYDAADDVV
                     TVTFSSQGVQIPHRLMCERVLNVPKEKLRLVTEDVGGGFGPKYPIYAESTLIAWATRK
                     LRRGLRWTCERAELAQSDSHARDLLASAELALDAGGRFLGLRVKAEANFGAYVSMFAP
                     SIPTTGMAKVISGLYRIPAIRIDFDCAFTNTVPVDAIRGAGKPEALFLLERLVDIAAH
                     ETGRTPADFRRLNLLKADEMPYAAASGYTYDAADCARLFETALKAADEPGFAKRRAVS
                     EAAGKRRGLGLCCHLHGTGGIADEHVVVEVEPDRLVARVGTQSQGQGHETVFAQILSA
                     SLGVPIERIDIRQGDTRTIPHGGGTGGSSSTIISGTTLKRAADVVIERGRNLAAERLE
                     TAPADIAYRNGAFEVVGTDRRIGLFELASTKPFAGDAVFGDKLGDKIDSYPTGVMVCE
                     VEVDPETGSVRVDRLTAVADCGTVVNPRLLAGQMQGGIVHGLGNALMEEAVYDEATGQ
                     LLSGTLMDYALPRADDVPDLRVETIATPSPNNFLGVKGVGELPTNGAPAAIANAVLDA
                     LRPLGVRHLDMPLTAHKVWQALQR"
     gene            complement(8780..9109)
                     /locus_tag="VF991_05120"
     CDS             complement(8780..9109)
                     /locus_tag="VF991_05120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HEX9555853.1"
                     /translation="MTTLDELLGAHGRLTTVHVERWVRRGLLRPTAEGDGWVFEAVDV
                     ARARLLAELVDEMGFDDESVETVIDLLDQVHTLRRQLEQLGQAIGRQPAETREAIALA
                     LKALRER"
     gene            complement(9106..10053)
                     /locus_tag="VF991_05125"
     CDS             complement(9106..10053)
                     /locus_tag="VF991_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012881206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEX9555854.1"
                     /translation="MTDPYTVLGVPRTASDDDIRKAFRKLAKKHHPDLNPGDKAAEAK
                     FKEISQANDILSDPEKRRRFDAGEIDATGQEVPPRGFYRDQAGGFGGAKYERAGAHES
                     FVDMGGVFSEMFGQRGGRGGFSFRTGDGEDFDMGGLPVTYSLRVPFLVAARGGKQRVN
                     LPDGKTLDIDIPEGTTDGQTLRLKGQGMPGTKGRPAGDAYVEIHVDPHPFFEPRDNDI
                     HVELPVTMTESVLGGRIRVPTVGGPVMLNVPAGSNTGTSLRLKGRGLLDRKSGQRGDQ
                     YVKLKVVLPDKPDPALKEFLEKWEAGRAYDPRKAMEQFT"
     gene            complement(10075..>10867)
                     /locus_tag="VF991_05130"
     CDS             complement(10075..>10867)
                     /locus_tag="VF991_05130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9555855.1"
                     /translation="IVNDAIQSGATRTILWLAIAYAGVAVLEQSLKLALNVYRGWVSE
                     DAVRRLRRTLHAADGHGAVIDDADEVGTHAAMVVAEAEPIGGFVGLAISEPLLQAGIL
                     ASVIGYMAYLEPWTVALCAAFLLPQMLFVPPMQRAINRRAAERIKTLRQVSGGIVDTG
                     IPTEEGIEHVFSLNMGIYKIKYTMNLAMNLMHYLAVAAALGVGGWFAVSGQIDVGTVV
                     AVVSGLGKLNDPWGDLVNWAREWSVDSVKYRLFADVVNGRGLATA"
BASE COUNT         1863 a         3646 c         3593 g         1765 t
ORIGIN      
        1 gtggcgcgtt catgggcttc cggaccgcga gcgtctcgct cgctcatgat cataagcgag
       61 cgagacgctc gcggtccgaa tgagcatgac aagacgcgcc gccctaggcg atgtcgctcg
      121 actggatgcg cttgacgccg gcgtcggtca tctgcttcca ggccgccgcg agcgaaccgt
      181 tgagatcgat ggcgcgcgtg gcgtcctcga tcacataggt cgcgaagccg agcttgcgcg
      241 catccaatgc cgtccacgcg acgcagaaat ccgtggccag cccggtcacg aacaccgtcg
      301 ttatgccgcg ctccttgaga tagcccgcca ggcccgtgcc ggtcttgcgg tcggcctcct
      361 cgaaggccga gtagctgtcg acgtccttgt ggaagccctt gcggatgatc agcgtcgccg
      421 tcggcagctt gagatccttg tgcaaggccg cgtcatcgga gccctgcacg cagtgatcgg
      481 gccacaggac ctgcgtgccg tagggcatcg tcgtggtctc gaagggcttc ttgccggaat
      541 ggacgctggc aaacgacgcg tggcccggcg tatgccaatc ctgcgtcacg acgatgttct
      601 cgaaagaccc cgcgagcttg ttgatcacgg gcacgacctc ggcgccgccc ttcaccggca
      661 gagtgccgcc atcgacgaag cagttctgca cgtcgaccac gatcagcgcc gacttggcgt
      721 cgggcttgat ggtgccggcc gcgcgcgccg accgccctcc gtccaatccg gccgcaaggc
      781 aagcggccgc agcagagccg aggaagagac ggcgcgagag atggggcgcg gcggtgacgg
      841 gcatggcgac ctccaggtgg atcgagccaa gtctagcggc ggcgggccgg tgtggcgaca
      901 tgtgcgatgg ccggacccgg gacttgaacc gacggaccgt cagtccgacg ttatgagcgt
      961 ggaaaggagg atgagacctt tgaccgaccg tatccgaccg catcgcctgc tgggcctgat
     1021 gctgctcctg gccgcggccg cgagcctcgc cggctgtggc gtggtcgcgg cgcctgtccg
     1081 ggccacaagt gccgccgtca aggtggtgcc gggggccggc gacgtcgtcg cggcgcccct
     1141 cgacgtgacg gccaacacca tcgactgagc gcaggccgca ggctacagcc ggagcagatg
     1201 tccatagccg gcgatctggg tatggacggc cgccgatcgc aggcagtgcc agaggctcgc
     1261 ctggttcgcc gacagcaccg gtcgcttcag atcctgctcg agcgcctcca ggatggcgac
     1321 gcagcgaaag ccggtcccgg cgatcagcac gccgtcggca cccggcgggc acgccgcctt
     1381 gatctgggcg tagagcggtt cgatctcctg ctcgaagccc atgccgtggc cgaccagctc
     1441 gcccggcggc aggtcgcgcc acttgcgacc cggatcgtag cgcaggtggc cggccggctc
     1501 gaacccgtga tcggcatagt agcgcaggcc cgcggccacc gtttcgtcgt tgaaccacgg
     1561 tggcaggacc aggaacggcc gtctcacccc cgaggcccgc agagccgcct gggtgtcgag
     1621 accgttggtg gtgacgataa cgcctgtacc gagcaagggg gagaggctgg ccacggtggc
     1681 ctcgtcccag cccttgccgc ctaaaaggct gctcgaactg tgcgcgacca cgaccgcgga
     1741 aagccgcatg gcagcaaact gacggcagcc gtgtaaaaga tcttcctcgg gctcgacgcc
     1801 tttcctgtcg tcacgccagc gcgcccaggg agcgcgcgcc gtcacacggg cagcgtgcac
     1861 cgacacgccg ggcggggcca tggcccacca ttcggcctcc ggcacggcct cgttgccgac
     1921 gatgaacagc ccgatgcggg ctcgccaacc ccaattgtcg ttcgtcgtca cagctgaagc
     1981 cgcgcggacc ctacttcttg gtcagcggtc cgccgaactt gcagtagcca ttgagcatga
     2041 tcttgttgtc gccttctttg atctggccga aaacttccat catgttgttg ccgccaacca
     2101 tcgccgcggt cttgatggcg ccgtccttca tcagggtcgt ctggaaggtg cgctccggcc
     2161 ggccctcctg ctggaagcgg cccttcacct gattgccgtc gacggtgacg tcgatcgtca
     2221 tcttgtaggt cggacacttc gagctgtcgg gaacattcac tccatagcct gcccaggaat
     2281 agacgaccgg ctcggcctgg accgtcccgg caaccagaat accggccaat gcgccgacca
     2341 atgcaacctt cagcatctct ctcgtctccc gtcagaaaaa atccctgatc gccctgagca
     2401 cggccgccgg cttctcctgc ccgaccgcgt gcccggcctt ggcaatgcga acgagcttcg
     2461 atttcgatat cgcctttttg aaggcatcgc catagaccgg cggaatcagc acgtcctccc
     2521 tgccccatac gaccaacgtc ttggcggtga tacgatgcag gcgctgggcc agaccacggt
     2581 ccgggatggg gaaaaggatc ttgcccgcca tgcccagccg ccgtgcgttc atgaccagga
     2641 attgtttgag gaattcgggg tcctccatgt tgccgccggt ggtcaggagc ttctggcccg
     2701 cctcggcgtc atggaacagc aagcccggca gttcgtaggg cagcttggag aagatgtcgg
     2761 ccaccggatg gtcgtcgagc cacaggccgg ccggcgccag caggcagagc ctggcgatct
     2821 cggtatgggc gatcgccgcc atctcggccg cgatcatgcc gcccatcgaa tggccgacca
     2881 cgatcggctt gctcagcttc agcgcctcca ggacatcgag accgtgcaag gtgacgtcga
     2941 gcatgtcacg gaagccatcc tcgccgcttg actgcccata gcccggcaat agcggcgcca
     3001 cgacgcggta cttggtggcc agggcggcga tcaacggatc gcccggcatg tgcccgccgg
     3061 cgccgtggag atagaggaga tcgcggcctt tgccggcttc gacgacttct atgcgggtct
     3121 tcgaaggctt cagcgtgaga aagcgggatt tcatggaacc aggaacctga cagggtgcgc
     3181 tggccacaaa gcttctgtca tcccgagcgg agcgagggac ctttccttcg cgtcgcagat
     3241 ccctcgcaag tcagcgcggg cgattacccc gcgcgactcg ggatgacggc cacgggccgt
     3301 cattccgcgg cgactttcat cggcacgcgc tcgttcatgg gatgcgtcca gaaccggtcg
     3361 tcgtggttgt tccagtcggg ccacaggtta cgcaggtgcg gcatgacctt ctcggcgaac
     3421 agccgcgtcg aatggcgcac cttgtcgtcg ggcatgttgc cgacatggag caggcagaag
     3481 atgttgccga cccgcagggt cttgatcagt tcctccatct gctgacgcac cgtctcgggt
     3541 gagcccgcga caatgtagcg gccgtcgacc agatccttcc aggtcatgct gggatagttg
     3601 cgcacggccg cctgggtgaa ttgcgacagc gcaccggtct ggatggtctt gacggtgcgg
     3661 tagcccggcg cgtcggcgaa gcccggatag acgtgcaggc agcgattgta gaagtaactg
     3721 acatgaggcc agtagagctt ctccgcctcg gcgtcggtgt cggcgacgca gatcacctgg
     3781 gcgaagcccg cgcggtaggg cgattcgtcg accttccgct cggccacccg cttccagtaa
     3841 ccctccatca ggagcttggc gcgcaggtag cccgagtagc tcaggtagga ataggagtag
     3901 gtgttgtcga tgcagaagtc gtaggtctcg accgagccgc cgccgggaat gaagatcggc
     3961 ggcgccggcc gctggatcgg cttgggccag caattgacgt agcgcagctt ggtgtagcgg
     4021 ccgttgaagg cgaacggctc gtcggccgcc cacgccttgc ggatgagatc gtgcgcctcg
     4081 gcgtatttct cgcgggtcag cgccgggatc gtgccgtagg cgtagttggt gtccatcgac
     4141 gtgccaaccg gaaagcccgc gatcagccgc ccgcccgaca gcacgtcgag catggctaac
     4201 tcctcggcca cgcgcagcgg cggattgtag agcgcgatcg aattgcccag cacgaccaag
     4261 gcggccttcg acgtccgccg cgtcagcgtc gccgccatga tgttgggcga cggcatcagg
     4321 ccgtaggcgt tggcatgatg ctcattcacg ccgatgccgt cgaagcccac cgattcggcg
     4381 aattcgagct ggtcgagata ctggtgatag atgccgtggc ccagctccgg ctcgtacatc
     4441 cggctgggca aatcgaccca gaccgaacga tgcttctgcc tgaaatcgtc cggcatgtgc
     4501 ggccagggca tcaggtggaa ccaggtgaat ttcatggctt cctctcctct cgtcatcccg
     4561 actcgcgcgg atctgatccg cgcttgagcg aagcggagtg gacggacctc ttcatgcgat
     4621 gacgaggccc ctcggcttcg ctcggggtga cgggtggcgt tccgcgccgc ccgtcactat
     4681 ggtggcgcag gagaacacga cacgccatgc aaaaccgttt catcgatctt tacagcgaca
     4741 ccaagaccaa gccctcggcc ggcatgcgaa aggcgatggc cgacgccgac gtgggcgacg
     4801 agcagaagat ggaggacccg accgtcaacc gcctgcgcga gcgggtctgc gcgcttttag
     4861 gcaaggaaga cgccgtcttc ctgccgagcg gcaccatggc caaccagatc tccatccgcg
     4921 tccattgccg cctgggcgac gaggtgatcg ccgataggac cgcgcacatc atcaacgccg
     4981 agaccggcgg tccggccgcc aattccggcg tcatgatccg ggcgatcgag gggcccaatg
     5041 gcgtgttcac gggcgagcag gtgaaggccg ccctgcgcga tcccaacagc cgcaacgcgc
     5101 cgcgctcgcg gctggtctcg atcgagaaca cgtccaacgg cggcttcggc acggtttggc
     5161 cgctcgccac catgcaaggc gtcgccaagg tcgcgcgcgc ggcgggcgtc gccctgcaca
     5221 tggacggcgc gcggctgtgc aacgcctcgg tcaagtccgg catcaaggcc agcgactatg
     5281 gcgcctgcgt cgactcgctg tggctcgact acaccaaggg gcttggcgcg ccggtcggtg
     5341 cgagcctcgc cggctccaag gacttcatca aggaagcttg gcggcagaag cagatgctgg
     5401 gcggctcgat gcgccagtcg ggcgtcatcg ccgcggccgc gctctacgcc ctcgactaca
     5461 actgggaccg gctggccgag gaccacgcca atgcccgcca cctttccgag ggcatcgcca
     5521 acatcaaggg cctcgagatc gacgtgccgc gcatggaaac caacctcgtc ttcttcgagg
     5581 tcaagaagcc gggttggaca gcggccaagc tggtcgaggc ctgcaaggag agcggcgtcg
     5641 gcatcggcgc caataccgcg acgcgcatcc gcgccgtcac ccatcttgac gtcaaccgcg
     5701 ccgacatcga tacggccttg aaggtgatca gcgacgcgtt ggcggcgtaa gccttcgcgc
     5761 gaggactgtc acggcgatat ggggttcccg gcgtcggcca ggaccttgcc gccaagaccg
     5821 atgaagcaga cgcccgccgc cctctcgatc cagtgcctgg ccctctgaaa gcgacgtatc
     5881 acggggccgg acgacatgaa gaggctcacg caggaatacc agatcagcga cgacgccgtc
     5941 acaaggccga tcatcaggcc catcagccag agcggtgtcg aagcggtgac ggctgtcgca
     6001 aagacgctgg cgaacagaac gatcgccttg ggattggtca gggtcaccag aaagccgaac
     6061 aggatcgcgc gtttcccgac gggccgcgtc gcctggtcca gctcgatcac ctggggcctc
     6121 gccctgagaa gcttgatgcc cagaaagatg agataggatc cacccaggac acgcactgtc
     6181 caggtgagcc actggtattc cgccagaatt gccgacaggc ccagcaggct gagcgtcgcg
     6241 taaaggcaga ggcccatcga cacgccgagc gtcgtcagca ggccggcgcg cgttccacgg
     6301 gtcatggacg accggacgac ggcgacgaaa tccggccccg gaaggatgag ggccgggatg
     6361 aagatcgcaa aaacactgat cagaaccagg gcgtagtcca tggaaaccga atctcctatc
     6421 gacctgcgtt cgaggtgcca tgctcttggc tcggctgcaa gggtcgcata agaccaatcc
     6481 gatgaatgta cccctgaagc tcggccagcc gatcctgcgc cgcgaggacc ggcgattcct
     6541 gacgggccgc ggtcgctatg ccgacaacac cgcacctgcc gacgccctcg ccgtgctgtt
     6601 cgtgcgatcg ccccatgccc atgcgcgact gatcggcatc gacaagaaag cggcgctcgc
     6661 ttcgcccggc gtcgccgcga tctacaccgc cgacgacctg ctagctgaca aggtcggcca
     6721 cctgccggca atcagcgaga tcaaggacgg ggccggcaac cgccatcgcg agccgctgca
     6781 tctgccgatg ccaaccggca aggtgcgtca tgtcggcgac gttgtcgcca tggtcgtggc
     6841 caaaaccctc gaccaggcgc gcgatgcggc ggagctgctc gagatcgact atgaggcgct
     6901 gcccgccgtg gttaccgtgg cgcaggcgct cgcgcccggt gcgccgctgg tgcacgacga
     6961 cgtgccgggc aacctgatgt gccgctgggg caggggcgat gtggcggcga ccgacgcggc
     7021 tttcgtcggc gcggcgcatg tctcgacgct caccatccgc tcgccacgcc agatcgtgca
     7081 ctacatggag acgcgcgcgg cgtggtcgat ctacgacgcg gcggacgacg tcgtcaccgt
     7141 caccttctcc tcgcagggcg tgcagatccc gcatcgcttg atgtgtgagc gcgtgctgaa
     7201 tgtgccgaag gaaaagctgc gcctggtgac ggaggatgtg ggtggcggct tcgggccgaa
     7261 atatccgatc tatgccgaat cgacgctgat cgcctgggca acgcgcaagc tcagacgcgg
     7321 cctgcgctgg acctgcgagc gtgccgagct ggcgcaaagc gacagccacg cccgcgacct
     7381 tttagccagc gccgagctgg cgctcgatgc cggcggcagg tttctaggcc tacgcgtaaa
     7441 agcagaagcc aatttcggcg cctatgtctc gatgttcgcg cccagcatcc cgaccaccgg
     7501 catggccaag gtgatctcag gcctctaccg cattccggcg atccgcatcg actttgactg
     7561 cgccttcacc aacaccgtgc cggtcgacgc catccgcggc gccggcaagc ccgaggcgct
     7621 gttcctgctc gagcggttgg tcgacatcgc cgcccacgag accggccgca cgccggccga
     7681 ctttcgccgg ctgaacctgc tcaaggctga cgagatgccg tatgcggctg cgagcggcta
     7741 cacctacgac gcggcggact gcgcgcgcct gttcgagacg gcgctgaagg ccgccgacga
     7801 gccgggcttc gccaagcgcc gcgccgtcag cgaagcggcg ggcaagcgtc gcggcctcgg
     7861 tctctgctgc catctccacg gcaccggcgg catcgccgac gaacatgtcg tggtcgaggt
     7921 cgagcccgac cggctggtgg cgagagtcgg cacgcagagc cagggccagg gccacgagac
     7981 ggtgttcgcg cagatcctgt cggcctccct cggcgtgccg atcgagcgca tcgacatccg
     8041 gcagggcgac acacgcacca tcccgcacgg cggcggcacc ggcggctcct cgtccaccat
     8101 catcagcggc acgacgctca agcgcgccgc cgatgtcgtg atcgagcgcg gccgcaacct
     8161 cgccgccgag cggctggaga cggcgccggc cgacatcgcc tatcgcaatg gcgccttcga
     8221 ggtcgtcggc accgaccgcc gcatcgggct gttcgagctg gcgtccacaa agccgttcgc
     8281 cggcgacgcc gtgtttggtg acaagctcgg cgacaagatc gactcctatc ccaccggcgt
     8341 catggtctgc gaagtcgagg tcgatcccga gaccggcagc gtgcgcgtcg accgcctgac
     8401 cgcggtcgcc gattgcggca cggtcgtgaa cccgcgcctg ctggccggcc agatgcaggg
     8461 cggcatcgtg catgggcttg gcaacgccct gatggaagaa gccgtctacg acgaggcgac
     8521 cggccagctt ttaagcggca ccctgatgga ctatgccctg ccgcgcgccg acgacgtgcc
     8581 cgatctccgg gtcgagacca tcgccacgcc gtcgcccaac aacttcctcg gggtgaaggg
     8641 tgtcggcgaa ctgccgacca acggcgcgcc ggcggcgatc gccaatgccg tgctcgatgc
     8701 gctgcgcccg ctcggcgtgc gccatctcga catgccgctc acggcgcaca aggtgtggca
     8761 ggcgctgcag cgctgacggt caacgctcgc gcaaagcctt gagagccagc gcgatcgcct
     8821 cgcgggtttc ggccggctgc cggccgatcg cctggccgag ctgttcgagc tggcggcgca
     8881 gggtgtgcac ctggtccaaa agatcgatca ccgtctcgac cgattcgtcg tcgaagccca
     8941 tttcgtcgac cagctcggcg agcaggcggg cgcgcgccac gtcgaccgcc tcgaagaccc
     9001 agccgtcgcc ctccgcggtc ggccgcagca ggccgcgccg cacccagcgc tcgacatgga
     9061 cggtcgtcag acggccatgc gcgccgagta gctcgtcgag agtcgtcatg tgaactgctc
     9121 catcgccttg cgcgggtcgt aggcgcggcc cgcctcccac ttctccagga actccttcaa
     9181 tgccgggtcg ggcttgtcgg gcagcacgac cttgagcttg acgtattggt cgccgcgctg
     9241 acccgacttg cggtcgagca gcccacggcc cttgagccgg agcgacgtgc cggtattgga
     9301 gcccgccggc acgttcagca tgacgggccc acccacggtc ggcacgcgga tccggccgcc
     9361 cagcaccgac tcggtcatcg tcaccggcag ctcgacatgg atgtcgttgt cgcgcggctc
     9421 gaagaagggg tgcgggtcga cgtggatttc gacgtaggca tcgcctgccg gacggccctt
     9481 ggtgccgggc atgccctgtc ccttgagccg cagcgtctgg ccgtcggtcg tgccctcggg
     9541 gatatcgatg tcgagcgtct tgccatcggg caggttgacg cgctgcttgc cgccgcgtgc
     9601 cgccaccagg aacggcaccc tgaggctgta ggtgaccggc aggccgccca tgtcgaaatc
     9661 ctcgccgtcg ccggtgcgga agctgaagcc accgcggcca cccctctgcc cgaacatctc
     9721 ggagaagacg ccgcccatgt cgacgaagga ttcgtgggcg ccggcgcgct cgtacttggc
     9781 gccgccgaag ccgccggcct ggtcgcggta gaagccgcgc ggcggcacct cctggcccgt
     9841 agcgtcgatc tcgccggcgt cgaagcggcg gcgtttctcg ggatcggaca ggatgtcgtt
     9901 ggcctgcgag atctccttga acttcgcttc ggccgccttg tcgccgggat tgagatcggg
     9961 atgatgcttc ttggcgagct tgcggaaggc cttgcggata tcgtcgtccg aggcggtcct
    10021 gggcacgccg aggacggtgt agggatcggt cataagcggc aaatgtgatg ccgttcaggc
    10081 ggttgcaagc ccccggccgt tcaccacgtc ggcgaaaagc cggtatttga cgctgtcgac
    10141 cgaccattcg cgggcccagt tcacgagatc gccccacgga tcgttgagct tgccgagccc
    10201 cgacaccacc gccaccaccg tgccgacgtc gatctggccg gacacggcga accagccgcc
    10261 gacgcccaag gccgcggcca cggcgaggta gtgcatcagg ttcatcgcca ggttcatcgt
    10321 gtacttgatc ttgtagatgc ccatgttgag cgaaaagacg tgctcgatgc cctcctcggt
    10381 cggaatgccg gtgtcgacga tgccgccgct cacctggcgc agggtcttga tacgctcggc
    10441 ggcgcggcga ttgatggcgc gctgcatggg cggcacgaac agcatctgcg gcagcaggaa
    10501 ggctgcgcac agcgccaccg tccacggctc cagataggcc atgtagccga tcacgctcgc
    10561 caggatgccg gcctgcagca agggctcgga gatcgccaag ccgacgaagc cgccgatcgg
    10621 ctcggcctcg gccacgacca tcgcggcgtg ggtgccgacc tcgtcggcgt cgtcgatgac
    10681 ggcgccatgg ccgtcggcag catggagggt tcgccgcagc ctgcgcacgg cgtcctcgct
    10741 cacccagccg cgatagacgt tgagggcgag cttcaggctc tgctcgagaa cggcgacacc
    10801 ggcataggcg atcgccagcc acaggatggt gcgggtggcg ccgctttgga tcgcgtcatt
    10861 gacgatg
//
LOCUS       DASWGA010000210         2633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2306274, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000210 DASWGA010000000
VERSION     DASWGA010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2306274"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="VF991_05135"
     CDS             <1..454
                     /locus_tag="VF991_05135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017482705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX9555856.1"
                     /translation="ALQADGRLPIVDLADKVGLSPTPCQRRVKRLEEEGVIARYAALI
                     SPDALGLGLQALVQVTLDDHSEKTVEAFESAIRARSEVVACYAVTGDMDFLLHVLSPD
                     LASFSDFALKALLRMPGVRGTRSSFIMQAVKSELAWAPAPQAAARARK"
     gene            complement(427..813)
                     /locus_tag="VF991_05140"
     CDS             complement(427..813)
                     /locus_tag="VF991_05140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555857.1"
                     /translation="MVRALVVLIRWAGVIAVVLAANMASLALAQTTVDPATRCAQLVA
                     FYDRYGRSRSLNSDGARNHTRIGANIDCERGHYEKGIAIMEDLLRRKAFDVPPPAPPS
                     SVPPLESPEYGASIDGSFYLRALAAA"
     gene            complement(821..1777)
                     /locus_tag="VF991_05145"
     CDS             complement(821..1777)
                     /locus_tag="VF991_05145"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine dehydratase"
                     /protein_id="HEX9555858.1"
                     /translation="MLSLQDVEEAANIVYAAMPPTPQYAWPLLARRTGCETWVKHENH
                     TPIGAFKVRGGLVYMDRLKKQHASIKGVISATRGNHGQSIALAAARAGIAATIVVPQG
                     NSVEKNAAMRAFGAELVEAGHDFDAARDTALRLADERGLVMVPSFHRDLVRGVATYAL
                     ELFRGVPAIDTVYVPIGLGSGICGVIAMRDALSPGTKVVGVVSTEAPAYALSFAAGKV
                     LATNSANTMADGMAVRGPDAEALAVILKGADRIVQVSDAEIAVAMRAYYEDAHQLTEG
                     AGAASLAALLQERERMKGRTVGLILSGGNIDRPLYLRLLGGA"
     gene            1825..>2633
                     /locus_tag="VF991_05150"
     CDS             1825..>2633
                     /locus_tag="VF991_05150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX9555859.1"
                     /translation="MPVLPRALEIQGEIAAIRRDIHAHPELAYEENRTSDIVAAKLAE
                     WGLEVTRGLGRTGLVGTLRKGNSLKSVGLRADMDCLPMDETNDFAHRSQNPGRMHACG
                     HDGHTAMLLGAAKVLSETRDFEGAVHFIFQPAEEGGGGAREMIADGLFDKFPCDAVFA
                     IHNKPGVPLGHIVTRGGPLLAAADRWDIRISGKGGHAAHPHLTVDPMVAGANIVLALQ
                     TIVARNIDPIDSTVVTVGFFKAGSAYNVIPTDVHIGGTTRTTSPENRALVKR"
BASE COUNT          447 a          873 c          850 g          463 t
ORIGIN      
        1 ggctctgcaa gccgatggcc gtctgccgat cgtcgacctt gccgacaagg tcggactctc
       61 gccaacgccg tgccagcggc gggtcaaacg actggaagag gaaggcgtca tcgcacgcta
      121 tgctgccttg atctcgccgg acgcgctggg acttggtctg caggccctgg tccaggtcac
      181 gctcgacgat cattcggaga aaacggtcga ggcgttcgag tcggcgatcc gcgcccgctc
      241 tgaggtcgtg gcctgctatg ccgtgaccgg cgacatggat ttcctgctgc atgtgctgtc
      301 gcccgacctc gcaagcttca gcgacttcgc cctgaaggcc ctgctgcgca tgcccggggt
      361 tcgcggcacg cgctcgtctt tcatcatgca ggcggtgaag agcgagctgg cctgggcgcc
      421 tgcgcctcag gcagcagcca gggcgcgcaa gtagaacgat ccatcaatgc tggcgccata
      481 ttcaggcgac tcgagcggcg gcacggaaga gggcggtgcg ggcggcggca catcgaacgc
      541 cttcctcctc agcaggtcct ccatgatggc gatgcccttt tcatagtggc ctctttcgca
      601 atcgatattt gcacctatgc gcgtgtgatt gcgggcgccg tcggaattca ggctgcgact
      661 tcttccgtag cgatcgtaaa acgcaacgag ttgggcgcaa cgcgtcgcgg ggtccacggt
      721 tgtttgcgcc aaggcgaggc tcgccatatt cgccgccagg acaacggcaa tcacgcctgc
      781 ccaacgaatc agaacaacga gcgcgcgcac catctcgtcc tcacgcgccg ccgagcaggc
      841 gcaagtaaag cggccggtcg atgttgccgc cgctcaggat caggccgacc gtcctgcctt
      901 tcatgcgctc gcgctcctgc agcagggcgg cgagagacgc ggcaccggcg ccctcggtga
      961 gctggtgcgc atcctcgtag taggcccgca tggcgacggc gatttctgcg tcgctcacct
     1021 gcacgatgcg atcggcgccc ttgaggatga ccgcgagcgc ctcggcgtcg ggaccgcgca
     1081 cggccatgcc gtcggccatg gtgttggcgc tgttggtggc taaaaccttg ccggcggcaa
     1141 aggacagggc ataggccggc gcttcggtcg acacgacgcc caccaccttg gtcccagggc
     1201 tgagcgcatc gcgcatggcg atcacgccgc agatgccgga gcccaacccg atcggcacgt
     1261 agaccgtatc gatcgccggg acgccgcgaa acagttccag cgcgtaggtc gccacgcctc
     1321 gcaccaggtc gcgatggaag gagggcacca tgaccaggcc gcgttcgtcg gccagacgca
     1381 gtgctgtgtc gcgcgcggca tcgaaatcgt ggcctgcttc caccagctcc gcgccgaaag
     1441 cgcgcatggc tgcattcttc tccaccgaat tgccctgcgg cacgacgatg gtggcggcga
     1501 tccccgccct ggctgcggcc agcgcgatgc tctggccgtg attgccgcgc gtggcgctga
     1561 tcacgccttt tatgctggcg tgctgcttct tcagcctgtc catgtagacc agcccgccgc
     1621 gcaccttgaa ggcgccgatc ggcgtgtggt tctcgtgctt cacccaggtc tcgcagccgg
     1681 tgcgcctggc gagcagcggc catgcatatt gcggcgtggg cggcatggcg gcgtagacga
     1741 tgttggccgc ttcctcgaca tcctgcagag acaacatcgt actactttgg gctaagatgc
     1801 ctgcagttcc aaccggagtg ctcaatgcca gttctgcctc gtgcgcttga aatccagggc
     1861 gagattgccg ccatccgccg cgacatccat gcccaccctg aactggccta cgaggaaaac
     1921 cgaacctccg acatcgtggc cgccaagctc gccgaatggg gacttgaagt gacgcgggga
     1981 ttgggcagga ccggcctggt cggcaccttg cgcaaaggca attcgttgaa gtcggttgga
     2041 ttgcgcgccg acatggactg cctgccgatg gatgaaacca acgacttcgc gcaccgctcg
     2101 cagaatcccg gtcgcatgca tgcctgtggc catgacggcc acaccgccat gctgctgggc
     2161 gcggccaagg tgctgagcga gacgcgtgac ttcgaaggcg cggtacactt cattttccaa
     2221 ccggccgagg aaggtggcgg cggggcgcgc gagatgatcg ccgacgggct gttcgacaag
     2281 ttcccctgcg acgcggtctt cgccatccat aacaagcccg gcgtgccgct gggccacatc
     2341 gtcaccaggg gcggtccgct gctggccgcg gccgaccgct gggacatccg catctccggc
     2401 aagggcggtc atgccgctca tccgcacctt accgtcgatc ccatggtggc gggcgccaac
     2461 atcgtgctgg cgctgcagac catcgtcgcc cgcaacatcg acccgatcga ttcgacggtc
     2521 gtgacggttg gcttcttcaa ggccggctcg gcctacaatg tgatcccgac cgacgtgcat
     2581 atcggcggca cgacgcgcac cacgagtccg gagaaccgtg cgctggtgaa gcg
//
LOCUS       DASWGA010000211         1927 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1668145, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000211 DASWGA010000000
VERSION     DASWGA010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1668145"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VF991_05155"
     CDS             <1..329
                     /locus_tag="VF991_05155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555860.1"
                     /translation="RSDSGRAIFVTSGIARRVVPYWGAYAASKAALDMLVGIYAAEVA
                     HTAVRVNLFNPGPIRTFMRREAFPGEDPAQQTPPEAHAESLIRLALPSCTLNGQWVAG
                     DEALKA"
     gene            complement(395..1825)
                     /gene="der"
                     /locus_tag="VF991_05160"
     CDS             complement(395..1825)
                     /gene="der"
                     /locus_tag="VF991_05160"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009759850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEX9555861.1"
                     /translation="MPSAEDRRPPRRVAPRVAIVGRPNVGKSTLFNRLVGRRRAIVDD
                     TPGVTRDVREAPAQLGDLAFTLLDTAGWETTGGAGLEARMRRFTERAIEGSDVVLFLI
                     DARSGILPMDESFAGWLRKRKDKVILVANKCEGRAGQQGLAEAHGLGLGEPLPVSAEH
                     GEGLSDLHEALARYIEPMPEQDDEKDDGLDESDEEAAKRPLLLAIVGRPNVGKSTLLN
                     RLVGEERMLTGPEAGITRDSIRVEWQWRGRPVRLVDTAGMRRRSRIDARLEAASVADT
                     LDAIRLADVVVVVLDAADMAEKQDLTIAGRVIEEGRALVIAVNKTDLLADDQATASRA
                     WRKLADRLEASFAQVKDVPIVGFSALSGRGIERLMPKVFETYDIWNKRVPTPKLNRWL
                     REMETLHPPPLAKGRRIRLRFMTQIKKRPPTFVLSVSQPQELGDDYLRYLTNRLRDDF
                     RLPGVPIRLAMRKPKNPYASRARKQR"
BASE COUNT          279 a          679 c          661 g          308 t
ORIGIN      
        1 gccgctccga ctcgggccgc gccatcttcg tgacctcggg catcgcgcgc cgcgtcgtgc
       61 cttattgggg cgcctatgcc gccagcaagg cggccctcga catgctggtc ggcatctacg
      121 ccgccgaggt ggcgcacacc gcggtgcgcg tgaacctgtt caatccggga ccgatccgca
      181 ccttcatgcg ccgcgaggcc ttccccggcg aggatcccgc gcagcaaacg ccgccggaag
      241 cccacgccga gtcgctgatc cggctggccc tgccgtcctg cacgctgaac ggccagtggg
      301 tggccggcga cgaggcgttg aaagcttagc ggaacagact cagacacccc ctcccccgct
      361 tcgcgacgga gaggacaccg agcaaacggt tttgctaacg ctgcttgcgc gctcgactgg
      421 cataggggtt cttcggcttg cgcatcgcca gccggatcgg cacgccaggc aggcggaaat
      481 cgtcgcgcag gcgattggtc aggtaccgca gatagtcgtc gcccagctcc tggggctggc
      541 tgaccgacag cacgaaggtc ggcggacgct tcttgatctg ggtcatgaag cgcagccgaa
      601 tgcgccgccc tttggcgagc ggcggcgggt gcagggtctc catttcgcgc agccagcgat
      661 tgagcttggg cgtcggcacg cgcttgttcc agatgtcgta ggtctcgaac accttgggca
      721 tcagccgctc gatgccgcgg ccgctgagcg ccgagaagcc gacgatcggc acgtccttga
      781 cctgggcgaa cgacgcctcc agccggtcgg cgagcttgcg ccaggcccgg ctcgcggtcg
      841 cctggtcgtc ggccagaagg tcggtcttgt tgacggcgat caccagcgcg cggccttcct
      901 cgatcacccg gccggcgatg gtcagatcct gcttctcggc catgtcggcg gcatcgagca
      961 ccacgaccac cacgtcggcc agccgaatcg cgtccagcgt gtcggcgacc gaggccgcct
     1021 cgagcctggc gtcgatgcgg ctgcgccggc gcatgcccgc ggtatcgacc aagcgcaccg
     1081 gccggccccg ccactgccat tcgacgcgaa tcgaatcgcg cgtgatgccg gcctcggggc
     1141 cggtcagcat gcgttcctcg ccgaccagcc ggttgagcag ggtcgacttg ccgacattgg
     1201 ggcggccgac gatggccagc agcagcggtc gcttggcagc ctcctcgtcg ctctcgtcga
     1261 ggccgtcgtc cttctcgtcg tcttgttccg gcatcggctc gatgtagcgg gccaaagcct
     1321 catggaggtc gctcaggcct tcgccgtgct cggccgagac agggagcggc tcgcccaggc
     1381 cgagcccatg cgcttcggcc aggccctgct ggccggcgcg gccctcgcac ttgttggcga
     1441 ccaggatcac cttgtctttg cgcttgcgca gccagccggc gaagctctcg tccatcggca
     1501 ggatgcccga gcgggcatcg atcaggaaca gcacgacgtc ggagccttcg atggcacgct
     1561 cggtgaagcg gcgcatgcgc gcctccagcc ccgcgccccc cgtggtttcc cagcccgccg
     1621 tgtcgagcag ggtgaaggcg aggtcgccga gctgcgccgg cgcctcgcgc acgtcgcgcg
     1681 tcacgcccgg cgtgtcgtcg acgatggcgc ggcggcggcc gaccaggcgg ttgaacaggg
     1741 tcgacttgcc gacattgggc cgcccgacga tggctaccct gggggcaacg cgccgcggcg
     1801 gccgcctgtc ctcagcggag ggcaatgagt cggcccgaat cggtcaagac atagatggtg
     1861 cggttggcga tgaccggtcc cagccggacc ggatcgcgca cgtcgagctt gccgaggatt
     1921 tcaccgg
//
LOCUS       DASWGA010000212         3146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_782141, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000212 DASWGA010000000
VERSION     DASWGA010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_782141"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1206
                     /locus_tag="VF991_05165"
     CDS             <1..1206
                     /locus_tag="VF991_05165"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9555862.1"
                     /translation="RVLDLTQFEAGPSCTEALAWLGAEVVKVENPQGGEAGRSLLGRQ
                     SGPGQSQNQDSWYFLLFNANKKSITVNLKSERGLELVKNMAKRADVMVENFAPGAIER
                     LGLGYDVVRAVNPGIVYAQVKGFGTGGPYENNLAFDMIAQATGGVMSITGERDGPPLK
                     PGVTLGDTGTGMLLAISILAALYRRRGTGEGERIEIAMQDAMLQYIRVALSTQATYGV
                     AAKRNGAKVLSGFAAPSGIYPCKPGGPNDYLYVYTSRTNPSHWRRLLEVIGRKDLIGD
                     PRFDTGAARQEREPEIDEMIAAWTRQHDKREAMRVLGGAGVPAGAIFDTMELTDEADF
                     ERRGIMQTMQHPAAGPFKMPGWPVRFSGRTPEVKPAPLLGQHTNEVLGEWLGLDADQI
                     DHLGKDSII"
     gene            1222..2874
                     /locus_tag="VF991_05170"
     CDS             1222..2874
                     /locus_tag="VF991_05170"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX9555863.1"
                     /translation="MAELTGSEILAKSLKNEGTDILFFLMGGPMLLAESSCIKEGIRP
                     LDVRHEQSAAFMAQAYSRLLQKPSVCMAASGPGVINLTTGIANALIDCCPVVAVGGSS
                     PIGQNGRQVFQEIDQLAIMKPCTKWADRVYNLKRIPEQVNFAFQKAMSGKPGPVYLDF
                     PGDVLYAKIPEEQVDWSLSGRPLLNARPLGDPNKVDALVDAIAKARQPIILSGSGVIW
                     SQAWPELQELVEKTGIPFYTTPQGRGVVPDDHEYSYLTMRSSAFRDADLIIVVGTRMN
                     YIIGHAAPPRFNGGAKIARIDIDADEIATAPRRVDIGIVGDCKAVLRQLIDASAKRIN
                     ADHFSAWRRTLSDGETAKRQAPGANKPMDETPIHPLRLCDEIKNFMQRDAILVVDGQE
                     ILNFGRQSMPTFTPGHRLNSGPFGTMGVGLPFGIGAKIAKPDKQVIVVHGDGSFGLNA
                     LELDTAVRHNIPILVVVSLNGGWTADPQRNKPGRNLGYTRFDKMAETLGCYGEYVERP
                     DEIRPALDRAQREVDRGSVALVNVKTDDRARAGTVAFAQYAT"
BASE COUNT          607 a         1044 c          983 g          512 t
ORIGIN      
        1 cgtgttctgg acctgaccca gttcgaggcc ggcccatcct gtaccgaggc gctcgcctgg
       61 cttggcgccg aggtcgtcaa agtggaaaac ccgcagggcg gcgaagcggg ccgctccttg
      121 ttgggccggc agtccggccc gggccagagc cagaaccagg actcctggta tttcctgttg
      181 ttcaacgcca acaagaaatc catcaccgtc aacctgaaat ccgagcgcgg gctcgagctc
      241 gtcaagaaca tggcgaagcg cgccgatgtc atggtggaga atttcgcgcc gggtgccatt
      301 gagcggctgg ggctcggcta cgacgtggtg cgcgccgtca acccgggcat cgtctacgcg
      361 caggtgaagg gctttggcac cggcggaccc tacgagaaca acctcgcctt cgacatgatc
      421 gcgcaagcga ccggcggcgt catgagcatt accggcgagc gcgacgggcc gccgctcaaa
      481 cccggcgtga cgctcggcga taccggcacc ggtatgctgc tcgccatcag cattttggcg
      541 gcactctacc ggcgccgcgg caccggcgag ggcgagcgca tcgagatcgc catgcaggac
      601 gccatgctgc aatatatccg cgttgcgctc tccacccagg cgacctacgg cgtggcggcg
      661 aagcgcaacg gcgccaaggt gctgtccggc ttcgcggcgc cgagcggcat ctatccgtgc
      721 aagcccggcg gaccgaacga ctacctctat gtctatacca gccgcaccaa tccgtcgcat
      781 tggcggcgat tgctcgaagt gattggacgc aaggacctga tcggcgatcc gcgcttcgat
      841 accggggcgg cgcgccagga gcgcgagccc gagatcgacg agatgatcgc cgcctggacg
      901 cgccagcacg acaaacgcga ggcgatgcgc gtgctcggcg gcgccggcgt gccagccggg
      961 gccatcttcg atacgatgga gttgaccgac gaggcggatt tcgagcggcg cggcatcatg
     1021 cagacgatgc agcacccggc cgccggcccg ttcaaaatgc cgggctggcc ggtgcgcttc
     1081 agcgggcgca cgccggaagt caagccggcg ccgctgctcg gacaacacac caatgaagtt
     1141 ttgggcgaat ggcttggtct tgacgcagac cagatcgacc acctcggcaa agacagcatc
     1201 atctaaggga ggaagcaaga catggcggaa ctcactggct cggagatcct ggcaaaatcg
     1261 ttgaagaacg aaggcaccga cattctgttc ttcctcatgg gcgggccgat gctgctcgcc
     1321 gagtcctcct gcatcaagga aggaatccgt ccgctcgacg tgcgccacga gcaatccgcc
     1381 gctttcatgg cacaggccta tagccggctg ttgcagaagc ccagcgtatg catggcggcg
     1441 agcggtcccg gggtgatcaa cctcaccacc ggcatcgcca acgcgctgat cgattgctgc
     1501 ccggtcgtgg cggtcggcgg ctcgagcccg atcggccaga acggccgcca ggttttccag
     1561 gagatcgacc agcttgccat catgaagccg tgcaccaaat gggccgatcg cgtctacaac
     1621 ctcaagcgca tccccgagca ggtgaatttc gctttccaga aggcgatgag cggcaagccg
     1681 ggcccggttt atctcgattt ccccggcgac gttctctacg ccaagattcc cgaagaacag
     1741 gtcgactgga gcctttccgg ccggccgctg ttaaacgcgc ggccgctggg cgatcccaac
     1801 aaagtcgatg cgctggtcga cgcgatcgcc aaggcgcgcc agccgatcat cctgtccggc
     1861 agcggcgtga tctggtcgca ggcctggccg gaactgcagg agctcgtcga aaagaccggc
     1921 attccgttct acaccacgcc gcagggccgc ggcgtggtgc cggacgatca tgaatattcg
     1981 tatctgacga tgcgctcctc ggcgttccgc gacgccgacc tgatcatcgt ggtcggcacc
     2041 cgcatgaact acatcatcgg ccacgcggca ccgccccgct tcaacggtgg cgccaagatc
     2101 gcgcgcatcg atatcgatgc cgacgaaatc gccaccgcgc cgcgcagggt cgatatcggc
     2161 atcgtcggcg actgcaaggc ggtgctccgc cagctcatcg atgcgagcgc caagcgcatc
     2221 aatgcggatc atttctccgc atggcggcga acgctgtccg acggcgagac ggcgaaacgc
     2281 caggcgccgg gcgccaacaa gccgatggac gagacgccga tccatccgct gcgactgtgc
     2341 gacgagatca agaatttcat gcagcgcgac gccatcctgg tggtcgacgg acaggaaatc
     2401 ctgaacttcg gccgccagtc gatgccgacc tttacgccgg gccatcgcct caattccgga
     2461 ccgttcggca ccatgggcgt cggactgccg ttcggaatcg gcgccaagat cgccaagccc
     2521 gacaagcagg tcatcgtcgt gcacggcgac ggctcgttcg gcctgaacgc gctcgagctc
     2581 gacaccgcgg tgcgccacaa cattccgatc ctggtggtgg tcagcctcaa cggcggctgg
     2641 accgccgatc cgcagcgcaa caagcccggc cgcaatctcg gctatacgcg cttcgacaag
     2701 atggccgaaa cgctcggctg ctacggcgaa tatgtcgaac gccccgacga aatccgcccg
     2761 gctttggacc gcgcccaacg ggaggtcgat cgcggctcgg tcgcgctcgt caacgtcaag
     2821 accgacgacc gcgcccgcgc cggcacggtg gcgttcgccc aatatgccac ttgagcatcg
     2881 cggacacgac tcgacggcgg cttgaagctg aaaatcgctg ccttcgcgcg ctccgcaaat
     2941 ggcggcctga tcataacggg ggcctcgttg acgttcgttc atcgcgatct gatcgtcgca
     3001 ctcgcagccc ggcagaagcc acccgcggtg tacttcgaac actaattcgt cgccggcgtt
     3061 ggactgttct cctatggcct gatctggtcg accagttcga gctcgatccc acttttgagg
     3121 gtacgcaaac gagaaagtac cctcaa
//
LOCUS       DASWGA010000213         3059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_154034, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000213 DASWGA010000000
VERSION     DASWGA010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3059
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154034"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1771)
                     /locus_tag="VF991_05175"
     CDS             complement(<1..1771)
                     /locus_tag="VF991_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA synthetase"
                     /protein_id="HEX9555864.1"
                     /translation="MAVGDKYRAVHARSLEDPEGFWAEQADAIDWTGRWDKVLDAAKA
                     PFYRWFAGAELNTCYNALDRHVERGRGEQTALIYDSPVTDSKKSFTYRALRDQVATLA
                     GAIANQGVGKGDRVIIYMPMIPEAVMAMLACARLGAVHSVVFGGFAANELATRIDDCA
                     PKLVLTASCGIEPGRVVKYKPLLDQAIELAQHKIARCLVFQRPQAEASMVKGRDLDWN
                     EAVAAAKPHDCVPVKATDPLYILYTSGTTGQPKGVVRDNGGYCVALAWSMQYLYGIKP
                     GDVWWCASDVGWVVGHSYIVYGPLIHGATSILYEGKPVGTPDAGAFWRVISEHKAVAL
                     FTAPTAFRAIKKEDPEGKLLKKYDLSKFRTLFLAGERGDPPTIEWAQKLLGVPIVDHW
                     WQTETGWAICGNFVGLEPMPIKPGSCSVPSPGWQLDVLDEQGKPMVEPGEVGALAARL
                     PLPPGTFPTLWNADERFRQAYLEEYPGYYKTGDAGFIDADGYVSVMTRVDDVINVAGH
                     RLSTGQIEEVLGSHNDVAECAVIGVADELKGQVPFGFLVLKAGVDRPSQDTVREVVQL
                     VRDRIGPVAFFKTAIVVPRLPKTR"
     gene            complement(2167..2727)
                     /locus_tag="VF991_05180"
     CDS             complement(2167..2727)
                     /locus_tag="VF991_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9555865.1"
                     /translation="MDRKTSSMVLIAAPQDRGDRSRSAIASRMTVGTLHGGSSFMGCR
                     VSRVARPRKVMGNPHPIDVHIGRRMRERRSLLGISQTALGASMGVTFQQVQKYERGAS
                     RIGATRLFEVSRRLDVPISFFFENAGALLFKRPGQPAWPPMKDRETLHLVQDFFKIRD
                     RQVRLSVARMVKAIARTSASRARQVA"
BASE COUNT          513 a         1036 c          989 g          521 t
ORIGIN      
        1 agcgggtctt gggcaggcgc ggcacgacga tggcagtctt gaaaaaggcg accgggccga
       61 tgcggtcacg caccagctgg acgacctcgc gcaccgtgtc ctgcgatggg cggtcgacgc
      121 cggccttcag caccaggaag ccgaacggca cctggccctt gagctcgtcg gcgacgccga
      181 tcacggcgca ttcggcgacg tcgttgtgcg agcccagcac ctcctcgatc tggcccgtcg
      241 acaggcgatg gccggcgacg tttatgacgt cgtcgacccg cgtcatcacc gagacgtagc
      301 cgtcggcgtc gatgaacccc gcgtcgccgg tcttgtagta ccccggatac tcttcgagat
      361 aggcctgcct aaaacgctcg tcggcgttcc atagtgtcgg gaacgtgccc ggcggcagcg
      421 gcagcctggc tgccagagcc ccgacttcgc ccggctccac catgggcttg ccctgctcgt
      481 ccagcacgtc gagctgccag cccggcgagg gcaccgagca ggagcccggc ttgatcggca
      541 tcggctcgag cccgacgaag ttgccgcaga tcgcccagcc ggtctcggtc tgccaccagt
      601 gatcgacgat cggtacgccc agaagcttct gcgcccattc gatggtcggc ggatcgccgc
      661 gctcgccggc caggaacaag gtgcggaact tcgacaggtc gtacttcttt aaaagcttgc
      721 cctcgggatc ctccttcttg atggcgcgga aggcggtcgg cgcggtgaac agcgccaccg
      781 ccttgtgctc ggagatcacc cgccagaagg cgccggcgtc gggcgtgccg accggcttgc
      841 cttcgtagag gatcgaggtc gcgccatgga tcagcgggcc gtagacgatg tagctgtggc
      901 ccaccaccca gcccacgtcg gaggcgcacc accacacgtc gccgggcttg atgccgtaga
      961 gatattgcat cgaccaggcc aacgctacgc agtagccgcc attgtcgcgc accacgccct
     1021 tgggctggcc ggtcgtgccc gacgtataga gaatgtagag cggatcggtt gccttcaccg
     1081 gaacgcagtc gtgcggcttg gcggccgcca ccgcctcgtt ccagtcgaga tcgcgaccct
     1141 tcaccatcga ggcctcggcc tgcgggcgct ggaacaccag gcagcgcgcg atcttgtgct
     1201 gggcgagctc gatcgcctgg tcgagcaacg gcttgtactt aaccacccgt cccggctcga
     1261 tgccgcacga cgccgtcagc accagcttgg gggcgcaatc gtcgatgcgg gtggcgagct
     1321 cgttggcggc aaagccgccg aacactaccg aatgcaccgc gcccagccgg gcgcaggcca
     1381 gcatggccat caccgcctcg gggatcatcg gcatgtaaat gatcacccgg tcgcccttgc
     1441 cgacgccctg gttggcgatg gcgccggcga gcgtcgccac ctggtcgcgc agcgcgcgat
     1501 aggtgaaact cttcttgctg tcggtgacgg gcgaatcgta gatcagcgcc gtctgctcgc
     1561 cgcggccgcg ttccacatgg cggtcgagcg cgttgtaaca ggtgttgagc tcggcgccgg
     1621 cgaaccagcg gtagaacggc gccttggcgg catccagcac cttgtcccag cgcccggtcc
     1681 agtcgatcgc gtcggcctgc tcggcccaga agccctcggg gtcttcgagc gagcgcgcat
     1741 gcactgcgcg gtatttgtca ccgacggcca tggcagcgtt tcctctgttt gctgccggca
     1801 ggcttagcgt tggccatgga ccgccgcaat ccggatatat ggccatacgc acccggaggg
     1861 gggcgccgat gcggatggtt ttcgtgccgt ggcgcgtgag tctttgcctg ccggtcgcga
     1921 gcgcggtgat ggcgcagggc tggacggcct acagtcccgg gggcggttgc taccgggtcg
     1981 acctgccggg cacgcccacg gtgaacacct cgttaatgcc tgtcggcggc ggccagaccg
     2041 tgtccatgac cgaggccgtg gtccaagtgc ggcctctctc ttggagtcgg accctcgtca
     2101 cgccctgcag cgcaccacct actctgccgg ccaccgtcct cccgtcacgt cgcccatcgg
     2161 tggatgctag gccacctgac gcgcccgcga tgccgacgtt cgggcgatcg ctttgaccat
     2221 cctggcgacg cttagccgga cctgacgatc gcggatcttg aagaaatcct ggacgaggtg
     2281 aagcgtctcc cggtctttca tcggcggcca ggccggctgg ccggggcgct tgaagagcag
     2341 ggcgcccgca ttctcgaaga aaaaagagat tggaacgtcc agcctcctcg atacttcgaa
     2401 caggcgcgtg gcgccgatgc ggctggcgcc ccgttcgtac ttctggactt gttgaaacgt
     2461 cacacccatc gaggcgccga gagcggtctg gctgatgccg agaaggctgc gccgctcgcg
     2521 catgcgcctt ccaatatgga cgtcgatcgg atgtggattt cccatgactt tccttggccg
     2581 cgcgacacgc gacacgcgac aacccatgaa cgacgatccc ccatgcaaag ttccgacagt
     2641 catgcgagac gcgatcgccg acctgctgcg atcgcctcga tcctggggcg cggcgattag
     2701 aaccatcgac gacgtcttgc gatccatgtt tcagcaccgc cgacaaccac gacgcgtgac
     2761 actctccgac caatgcgacc agtacgacgc aatgcgtcgg cagtgacggc ctcaccgccg
     2821 cggcacggac aggcctggtg tctaagaggc acgccgcgcg cgcaaaggct cgcgcgatat
     2881 gacaggcgca acggcgacca ggatggcggc gtgcatgcga ctcactaccg acgcgacgca
     2941 tgctcgtacg actggacggc gaagattcag tcacagacgt caactgtacc gtgcgcttgt
     3001 tgacggggcg ccgcccgacg ttccctgttt cagcgcttcc ggcaaccata gcgcgcgac
//
LOCUS       DASWGA010000214         5310 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1165631, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000214 DASWGA010000000
VERSION     DASWGA010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5310
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1165631"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1026
                     /locus_tag="VF991_05185"
     CDS             <1..1026
                     /locus_tag="VF991_05185"
                     /inference="COORDINATES: protein motif:HMM:NF025587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HEX9555866.1"
                     /translation="IGGEIPLIDVADYLAGKPGAAQRAANQLRFAFEHVGFYYLAGHG
                     VPQTLIDTAYREAARFHAQPIEAKLAVKVDEHNIGYMPIARTPPPNAAAQGKKPSQNE
                     AYFLRRERGPGDPDVLSNRRFHAMNKWPNESDLPGFRDNVLAYMGTLEALCKKLVQLY
                     ALALDLPETFFDACFREPHMILRMSRYPVIDSADESVASLVPHTDSGFMTLLPPNKVQ
                     GLSILLPDGRWMDAPGVEDAFVVNGGDILHRWSNERFLSTPHRVRNVSGQLRYAVPFF
                     CDPDHDTMIECLPSCQAFERPAKYPPIKFGDYALWFAAQRYEHMAKVQVPDESEIAPG
                     ARATARW"
     gene            1094..1924
                     /locus_tag="VF991_05190"
     CDS             1094..1924
                     /locus_tag="VF991_05190"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9555867.1"
                     /translation="MAVASGACAAPSAWIDAHTHVFVRGLKLAVDARYAPDYDASWQS
                     LLALAEKNGVGQTVILQPSFLGYDNSYLFSALRAEPGRFRGVPWISPSVETSPDEWEE
                     MARIGVKGLRFPIFGLPTPHWPAYADMLAEAIKRDWPIHLYVESKRLPGMLPFLLDAG
                     HKVVIPHFGMFDRTLGPLRDPGFELLLEKASTGRVWVLLSGAYRVGLERARPAAALLL
                     AAFGPERLMWASDWPHTDTGLDRVTTYPKTLQWFEEWVPDAATRQKILVDTPSKLYGF
                     "
     gene            complement(1921..2994)
                     /locus_tag="VF991_05195"
     CDS             complement(1921..2994)
                     /locus_tag="VF991_05195"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9555868.1"
                     /translation="MLVFRQLFDPTSSTYTYLLGCSASGEAVLIDPVFEQVRRDAALI
                     GELGLKLQWTLETHVHADHVTGAWLLKQKLGSGIALAAASGASGADRLLNDGDQVTFG
                     RRALEVRSTPGHTNGCVTFVLDDESMAFTGDCIMIRGSGRTDFQQGDPRALYRSVRSR
                     IFSLPETCLLYPAHDYRGLTATSVAEEKKFNPRLGGEVGEGDYVGYMKNLDLPHPKKI
                     DEAVPANLRCGQPGNETVVPPDPCWAPLRFTFGGVWEVEPHWLEENISKVQVVDVREP
                     AEFTGPLGHIRGATLVPLGELATRAKDLPRDKPIVAVCRAGSRSAHATAILQKAGFAD
                     IANLPGGMLRWRAEGRSVEGGAL"
     gene            complement(3136..4089)
                     /locus_tag="VF991_05200"
     CDS             complement(3136..4089)
                     /locus_tag="VF991_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9555869.1"
                     /translation="MEKRKLGRSGLELAPVAFGGNVFGWTADEATSHKLLDAFVDAGF
                     SFVDTADVYSRWAPGNKGGESETVIGSWLKKDPKKRDKVLIATKCGMLPESGALSRAH
                     IKKSVDESLQRLNTDRIDLFQSHKDDKATPQEETLSTYGELIKAGKIRAIGASNFEAP
                     RLAEAAKIAKDKGLPRYESLQPHYNLMERGLFEGDLENECLKEGIGVIPYYSLASGFL
                     SGKYRSEADLGKSKRGGGLKKYLNDKGFGILKALDVAAKKHNASDTQVALAWLMQRKS
                     ITAPIVSATSLEQLKDLIAAPAIKLDAESIAAIDKASAPAG"
     gene            complement(4106..>5310)
                     /locus_tag="VF991_05205"
     CDS             complement(4106..>5310)
                     /locus_tag="VF991_05205"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEX9555870.1"
                     /translation="WVLGLVFYGLMGLAAIYAALTESNTAARGLGRIESALIALLLFE
                     TLMHRITRHIVSELPKAGDVVADCLRLVARLYVVILLAEALMVRVLGAMTAEEWLPHD
                     RGAKVAALSIVAIYAFWRFLKFRMDSYIASNPLPSADAAADAEDDVQIAASRLRTLMP
                     LLRAIAGAIIAVVGGLLVLSELGVNITPLIAGASVFGLAVSFGSQSLVRDIVSGVFFL
                     AEDSFRIGEYVDCSKVKGTVEGFSVRSLKLRHQNGQLHIVPFGQVAHITNFSRDWTVV
                     KFNLAFANGTDVELLRKTVKKIGTDMMEEPIFKPILLQPLKMQGVVDIKDNSLIVRFK
                     FMARPKNPSLVQRMAVRRMYEAFPGLGIQFATPTYPFAMPTASPSPPTAAPAAPPAVV
                     VEPAKAAE"
BASE COUNT          855 a         1785 c         1756 g          914 t
ORIGIN      
        1 atcggcggcg agatcccgct gatcgacgtc gccgactatc tcgccggcaa gccgggcgcc
       61 gcccagcgcg ccgccaacca gctgcgcttc gccttcgagc atgtcggctt ctactacctg
      121 gccggccatg gcgtgccgca aaccctgatc gacaccgcct accgggaggc ggcgcgcttc
      181 cacgcccaac cgatcgaggc caagctcgcg gtcaaggtcg acgagcacaa tatcggctac
      241 atgccgatcg cccgcacgcc gccgcccaac gccgccgcgc agggcaagaa gcccagccag
      301 aacgaggcct acttcctgcg ccgtgaacgg ggccccggcg atcccgacgt gctgtccaac
      361 cgccgcttcc acgccatgaa caaatggccg aacgagagcg acctgccggg cttccgcgac
      421 aacgtgctgg cttacatggg gacactcgaa gcactgtgca aaaagctggt gcagctctat
      481 gccctggcgc tcgacctgcc ggagaccttc ttcgacgcct gcttccgcga gccgcacatg
      541 atcctgcgca tgtcgcgcta tccggtgatc gacagcgccg acgagtccgt cgccagcctg
      601 gtgccccaca cggattcggg attcatgacc ttgctgccgc ccaacaaggt gcaggggctg
      661 tcgatcctgc tgcccgacgg gcgctggatg gacgcgccgg gcgtcgagga cgcgttcgtc
      721 gtcaatggcg gcgatatcct gcaccgctgg agcaacgagc gcttcctgtc gacgccgcat
      781 cgcgtgcgca acgtctccgg ccaactgcgc tacgccgtgc cgttcttctg cgatcccgac
      841 cacgacacca tgatcgagtg cctgccgagc tgccaagcgt tcgaacggcc ggccaaatac
      901 ccaccgatca agttcggcga ctatgcgctg tggttcgccg cgcagcgtta cgaacacatg
      961 gccaaggtgc aggtgccgga cgagtccgag atcgcaccgg gggctcgtgc gacggcgaga
     1021 tggtgactct tccgcggtcg acctgacgcc atcctgctcc atgctgcccc gccgggcgtt
     1081 catcgcatcg tcggtggccg tcgcctcagg cgcatgtgca gcgccttccg cctggatcga
     1141 tgcccacacc cacgttttcg tgcgcgggct gaagctcgcc gtcgatgcgc gttatgcgcc
     1201 cgactacgac gcatcgtggc aaagcctgct ggcgctcgcc gagaaaaacg gcgtgggcca
     1261 gacggtgatc ctgcaaccgt cgttcctggg ctacgacaat tcctatctgt tcagcgcgct
     1321 cagggccgag cccggccgct ttcgcggcgt gccgtggatc tcgccctcgg tcgagaccag
     1381 tcccgacgaa tgggaggaga tggcgcggat cggcgtcaag ggtctgcgct ttccgatctt
     1441 cggcctgccg acgccgcatt ggccggccta tgccgacatg ctggccgaag caatcaagcg
     1501 cgactggcct atccatctct atgtcgagag caaacggctg cccgggatgc tgcccttcct
     1561 gctcgacgct ggccacaagg tggtgatccc gcatttcggc atgttcgatc gcacgctcgg
     1621 cccgctgcgc gatccgggct tcgagctgct gctcgagaag gccagcaccg gccgcgtctg
     1681 ggtgctgctg agcggcgcct accgggtcgg gctcgagcgg gcgcgcccgg cggcggcgct
     1741 gctgctcgcc gcctttggcc ccgagcggct gatgtgggcc agcgactggc cgcacaccga
     1801 caccggcctc gaccgcgtga cgacctatcc caagactctg caatggttcg aggagtgggt
     1861 gcccgacgcg gcgacgcggc aaaagatcct ggtcgacacg cccagcaagc tctacggatt
     1921 ctagagtgcc ccgccttcga cgctgcgccc ctcggcgcgc cagcgcagca tgccgcccgg
     1981 caggttggcg atgtcggcga agcccgcctt ctgcaggatc gccgtggcat gggccgagcg
     2041 gctgccggcg cggcagaccg cgacgatagg cttgtccctg ggcagatcct tggcgcgggt
     2101 ggcgagctca cccagtggca ccagggtggc ccccctgata tggcccaacg gcccggtgaa
     2161 ctcggccggc tcacgcacgt ccacgacctg caccttcgag atgttctcct ccaaccagtg
     2221 cggctcgacc tcccacacac cgccgaaggt gaagcgcagc ggcgcccagc acggatcggg
     2281 cggcaccaca gtctcgttgc cgggctggcc gcagcgcagg ttggccggca ccgcctcgtc
     2341 gatcttcttg ggatgaggca ggtcgaggtt cttcatgtag ccgacatagt cgccctcgcc
     2401 gacctcgccg cccagccgcg gattgaactt cttctcctcg gccacgctgg tggcggtgag
     2461 accgcgatag tcgtgcgcgg gatagagcag gcaggtctct ggcagcgaaa agatgcgcga
     2521 gcgcactgag cggtagagcg cccgcgggtc gccctgctgg aaatcggtgc ggcccgagcc
     2581 gcggatcatg atgcagtcgc cggtgaaggc catgctctcg tcgtcgagca cgaaggtgac
     2641 gcagccgttg gtgtgaccgg gcgtcgagcg cacctcgagc gcgcgccggc cgaaggtgac
     2701 ctgatcgcca tcattcagca ggcggtcggc gcccgacgcg ccgctcgccg ccgcgagcgc
     2761 gatgccactg ccaagctttt gcttcaggag ccaggcaccg gtcacgtgat cggcgtggac
     2821 atgggtctcg agcgtccatt gcagttttag ccccagctcg ccgatcaggg cggcgtcgcg
     2881 gcggacctgc tcgaacaccg gatcgatcag caccgcctcg cccgacgccg agcagcccag
     2941 caggtaggtg taggtcgacg aggtcggatc gaagagctgg cggaagacga gcattgaggc
     3001 caccgtagca tcgtcgtctg ttacttttca ggctcctctc ccccttgggg gagaggttgg
     3061 gtgaggggga tgcggacgtc gttgcccccc ctcacctatc ctctccccca agggggagag
     3121 gaatatgagt gcgctttacc ccgccggtgc gctggccttg tcgatggcgg cgatcgactc
     3181 ggcgtcgagc ttgatggcgg gcgcggcgat caggtccttg agctgctcca ggctggtggc
     3241 gctcacgatg ggtgcggtga tcgacttcct ttgcatcagc caagcgagcg ccacctgcgt
     3301 gtcgctcgca ttgtgtttct tggccgccac gtcgagtgcc ttcaggatgc cgaagccctt
     3361 gtcgttcagg tacttcttca ggccgccgcc gcgtttgctc ttgccgaggt cggcctccga
     3421 ccggtacttg ccgctcagga agccgctggc cagcgaatag tacgggatga cgccgatccc
     3481 ttccttcagg cattcgttct cgagatcgcc ctcgaacagg ccgcgctcca tcagattgta
     3541 atgaggctgc aggctctcgt agcgcggcag gcccttgtcc ttggcgatct tggccgcttc
     3601 ggcgagccgc ggcgcctcga agttggaggc gccgatcgcg cggatcttgc cggccttgat
     3661 cagttcgccg taggtcgaga gcgtttcctc ctgcggcgtg gccttgtcgt ccttgtgcga
     3721 ctggaagaga tcgatgcggt cggtgttgag ccgctgcagc gattcgtcga ccgatttctt
     3781 gatatgggcg cgcgacaggg cgccggactc cggcagcatg ccgcacttgg tggcgatcag
     3841 gaccttgtcg cgcttcttgg gatccttctt gagccagctg ccgatcaccg tctccgattc
     3901 gccgcccttg ttgccgggtg cccaacggga atagacatcg gcggtgtcga cgaaggagaa
     3961 gccggcatcg acgaaggcgt cgagcagctt gtgcgaggtc gcctcgtcgg ccgtccagcc
     4021 gaacacgttg ccgccgaaag cgacgggggc gagttcgagc ccggagcggc ccagcttgcg
     4081 tttttccatg gtctttctcc tctggctatt cggcggcctt tgccggctcg acaacgaccg
     4141 ctggcggtgc ggctggcgcg gcggtcggtg gcgatggcga cgccgttggc atcgcgaagg
     4201 gataggtcgg cgtggcgaac tggatgccga ggccggggaa ggcctcgtac atgcggcgga
     4261 cggccatgcg ctgcaccagg ctcgggttct tgggccgcgc catgaacttg aagcgcacga
     4321 tcagcgagtt gtccttgatg tcgaccacgc cctgcatctt gagcggctgc agcaggatcg
     4381 gcttgaagat gggctcctcc atcatgtcgg tgccgatctt cttcaccgtc ttgcgcagca
     4441 gctcgacgtc ggtgccgttg gcgaaggcga gattgaactt caccaccgtc cagtcgcggc
     4501 tgaagttggt gatatgggcg acctggccga atggcacgat gtggagctgg ccgttctggt
     4561 ggcgcagctt cagcgagcgc acgctgaagc cctcgacggt gcctttgacc ttgctgcagt
     4621 cgacatactc gccgatgcgg aaggaatcct cggccaggaa gaacacgccc gacacgatgt
     4681 cgcgcaccag cgactggctg ccgaacgaca cggcgaggcc gaacaccgag gcgccggcga
     4741 tcagcggcgt gatgttgacg ccaagctcgg acagcaccag caagccgccg accacggcaa
     4801 tgatggcgcc ggcgatggca cgcaacagcg gcatcagggt gcgcagccgc gaggcggcga
     4861 tctgcacgtc gtcctcggcg tcggccgccg cgtcggccga gggcagcggg ttggaggcga
     4921 tgtaggaatc catgcggaat ttcaggaacc gccagaacgc gtagatcgcc acgatgctca
     4981 gcgccgcgac cttggcgccg cggtcgtgcg gcagccactc ctcggccgtc atggcgccca
     5041 gcacccgcac catcagcgcc tcggcgagca ggatcacgac atagagccgg gcaaccaggc
     5101 gcaggcagtc ggccacgacg tcgcccgcct tcggcagttc ggagacgata tggcgcgtga
     5161 tgcgatgcat cagcgtctcg aacagcagga gcgcgatcag cgccgattcg atccggccca
     5221 gcccgcgcgc ggcggtgttg ctctcggtga gcgcggcata gatcgcggcc agccccatca
     5281 gcccgtagaa gacgagcccc agcacccacc
//
LOCUS       DASWGA010000215         8406 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_27640, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000215 DASWGA010000000
VERSION     DASWGA010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8406
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27640"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            341..1435
                     /locus_tag="VF991_05210"
     CDS             341..1435
                     /locus_tag="VF991_05210"
                     /inference="COORDINATES: protein motif:HMM:NF007504.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate/lactate/ureidoglycolate dehydrogenase"
                     /protein_id="HEX9555871.1"
                     /translation="MADGQNSVGEVRIKPDRLHAFAVAICRADGSSDGEARLVADHLV
                     LANLFGHDSHGVGMIPHYIQNTATGACVRNHHAKIARDNGAVIVIDGGAGYGQVVAKE
                     AMDIGIDRARKHGVCVIGLTNAHHIGRIGHWGEQCARAGMVSTHWVNVHGHKSLVAPF
                     GGAEPRFTTNPYCTAVPRKGKEPIVLDFATSQVAMGKVRVANNKRVQMEEGLLIDAAG
                     QPTTDPGVMYNPPFGAILPFGLHKGGGLAVICDLLAGALTGGRTHSPRTIKKDGTDII
                     NNMLSIIIDPAAMGGTEQFEDEVETFITWVKSAKPQPGVAEVLAPGEPERARRVDREK
                     NGVPIDTTTWQQLVEVARKVRLNDTDIPRA"
     gene            1452..2072
                     /locus_tag="VF991_05215"
     CDS             1452..2072
                     /locus_tag="VF991_05215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9555872.1"
                     /translation="MAKMKLYYSPGSPYARKVRVTAIETGLDKKMDTVNVAVSPVAAN
                     ADVDKHNPIGKIPALSVKGMDLFDSPVICEYLDHQHKRRRVLPRKGRARWVALRLQAM
                     GDGLLDAALLARYEGFLRPEDKRWPDWTKGQIKKIDGVLDQLEAEAKSLKGRPTLGTI
                     TVGCALGYLDFRFGDHNWRAKRPKLAKWFGTFSKLPSMKTTAPPLA"
     gene            2075..2497
                     /locus_tag="VF991_05220"
     CDS             2075..2497
                     /locus_tag="VF991_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9555873.1"
                     /translation="MGGVTAEEIIAQLGLRPHPEGGHFVETFRAPGPGRSAGTAIYFL
                     LKAGERSHWHRVDADEIWHHYAGAPLELSMSDDGRSVRHLRLGSDFGIGEQPQATVPR
                     HVWQAARSLGAWTLVGCTVAPAFEYSGFELAPPGWTPR"
     gene            complement(2494..3375)
                     /locus_tag="VF991_05225"
     CDS             complement(2494..3375)
                     /locus_tag="VF991_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9555874.1"
                     /translation="MTVVDVSRRRAMAAGFAAIALWGALAALSVSAGPIPPFQMVAMT
                     FAVGAAIGVARAVARGVGWAGLVGWPWRVWLLGVGGLFGYHALYFAALQLAPPAEANL
                     VNYLWPLLIVLLSAPLAGERLGWPHLLGALLGFAGVALLAFGRGVSFTAAYALGYALA
                     LGCAFTWSLYSVLSRRFGETPSDAIAAFCAVSAALSLICHLLFERTVWPASTMAWLAV
                     LALGLGPAGAAFYLWDHAVKRGDIRALGALSYATPILSTALLIACGLAEPTGSLLIAA
                     VLVTIGAVLASRELWRR"
     gene            3440..4195
                     /locus_tag="VF991_05230"
     CDS             3440..4195
                     /locus_tag="VF991_05230"
                     /inference="COORDINATES: protein motif:HMM:NF019032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HEX9555875.1"
                     /translation="MFVRPANLLSHRLARMAFIMACVAALIVASAGPLHRYLGLDVEA
                     VIAIFRYGFYIAIAAAALGLATVVPTRPGGRRRGFVAVILAIMVGLGAAYVPVDWFLR
                     AQRLPELNDISTDIANPPALVVTAQLRRGASNPPAYPGASAGVLQRAAYPDIAPVVLP
                     VAPAEAFKRVDKAAMAMDWEIVARAPDEGRLEAVATSEWFGFRDDIVVRIRPDGAGSR
                     IDIRSKSRVGESDLGANARRIRAFIARLKDSSG"
     gene            complement(4187..5623)
                     /locus_tag="VF991_05235"
     CDS             complement(4187..5623)
                     /locus_tag="VF991_05235"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX9555876.1"
                     /translation="MTADVTVPAESARAARRRSPVFGLSWRILGLVIAAVMTAEILIF
                     LPSIARFRMVYLEQLIESGTLAALALDATPDNMVTEEVKRALLNNARVDAVVLVEPNK
                     PKRALMNIEPRPTMPSYNLKEEGVFPLIWDALAAMVHDGARYIRVGGESMRLPRAMVW
                     IVLDELPMRIAMYAYATRILVLSVIIALFTAALLYFALRWLVILPLQDLSTDMTAFRR
                     APEEPGTERPPTQRNDEIGVVDREFQNLQRELRASLRQKSRLAEVGAATNKINHDLRN
                     MLSTARLLSDRLARSDDERTRSLAPTILNTIDRAARLASDAIEYVRDRPTPRLANIDL
                     ADLVDEVGVVLQEQGEDSTPNIVRHWDNAVGADQPVRADRDLLYRVFVNLGRNAFEAS
                     ATTVTVRARTSGGHLVIEVADDGPGVPQEVADQIFRPFTRGGRAGGAGLGLAIARDLV
                     LAHGGDIALAETSAKGSTFQFTLPSSSS"
     gene            complement(5681..6412)
                     /locus_tag="VF991_05240"
     CDS             complement(5681..6412)
                     /locus_tag="VF991_05240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555877.1"
                     /translation="MNKTLLLAAVAAIALPLAAADAFVHAGGWGGHSAWGGADARGGH
                     AWGNGDGTWKATGARGGTASGSDGTWNASGWRGGTASGGDGSWRADGYHGGTATGGGG
                     AWTATGTGGHTYYGSPDYYHGGYYGAYNAPTVVNAYGAGCYNCGGWNTGGAVAAGMVA
                     GAAVGAAAANTANTQAAYSAGVTAGTASATSAANPPGTLYGTLPAGCAYRAVGSQPYY
                     SCSDGLWFAPAYGANGVYYRVVTAP"
     gene            complement(6429..7253)
                     /locus_tag="VF991_05245"
     CDS             complement(6429..7253)
                     /locus_tag="VF991_05245"
                     /inference="COORDINATES: protein motif:HMM:NF021391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2092 domain-containing protein"
                     /protein_id="HEX9555878.1"
                     /translation="MTIFAVIRLVAAALLTAMILPAAQAQQQQPAATPASPANLGVKV
                     EIEPAAMALVKAMSDRLAAAKTMSFTAVATYESADRTGEPLAYFTRSQVTLQRPDKLS
                     VITPGDGPRTEFYYDGKTAQAYEPAANLVAVAQAPDTIDAMLRAAFQYAAIYFPFTDI
                     VVSDPLKAISENLTIAFVVGKSNVVAGVPTDIVVLVGKYAHVQLWIGSDDKLPRLARA
                     IFVGDPAHYRHTVALSDWKLDQPVAADSFTSAALAGARRIDFVAPVVPITGWATKK"
     gene            complement(7309..>8406)
                     /locus_tag="VF991_05250"
     CDS             complement(7309..>8406)
                     /locus_tag="VF991_05250"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9555879.1"
                     /translation="VRVLKEEARFVGRTELLAGPHHIRSRRIVLATGSRPTAPPIPGL
                     ADVPYLTNETVFANRTLPDHLIVIGGGPIGLELAQAHRRLGSKVTVLEAAAFLAKDDA
                     ELSAIVLKRLRAEGIDLRAPAKIARVERAAAGMTVILEDGERLDATHLLVAAGRAPIV
                     ERLDLEIAGVAHTRQGITVDASQRTSNRHVWAIGDCNGLYAFTHMAGYEASLFIRGAL
                     FRAPARLDASIVPWSTYTDPELAQVGLSEHAAREKHGEAIKVLRWKLAENDRAQTERE
                     TEGMVKAITDRRGRILGATIVAPHAGELIQPWCLAIAKRLKISALASFVPPYPTLGEA
                     SKRAAGSYFAATLFGPRTRKLVRLLARLPVW"
BASE COUNT         1397 a         2849 c         2922 g         1238 t
ORIGIN      
        1 ggtcgagctg gctcgtccac agatcgacga gctggccgaa cggccgttgc ggggccgcgg
       61 tctggcccaa cgccgtgccg cccgcgagca gcagggcaag acaggccaga cggaaaagaa
      121 cccgcatgcg gttcactagc atggcgcgcg acgggccatc accgggccgc cgaggaaagg
      181 agaggaaaaa caggccagca atgcccccag ggttttacgg gctttgccgg cgccgaacgg
      241 ccaaatcagg gcgaaaaacc gcggcttttc cgcgcgagtt gacaggactg ccccgacgcg
      301 gaaccttgcg cgccgaaagc gaaatccggg ggcaggcggc atggccgatg ggcagaattc
      361 ggtaggagaa gtgcggatca agcccgatcg gctgcacgcc ttcgccgtgg cgatctgccg
      421 ggccgacggc agttccgacg gggaggcccg cctggtcgcc gatcatctgg tgctggccaa
      481 cctgttcggc cacgacagcc acggcgtcgg catgatcccg cattatatcc agaacaccgc
      541 gaccggcgcc tgcgtccgta accatcatgc aaagatcgcg cgcgacaatg gcgcggtgat
      601 cgtgatcgac ggcggcgcgg gctacggcca ggtcgtcgcc aaggaggcga tggatatcgg
      661 catcgaccgg gcccgcaagc acggcgtgtg cgtcataggc ctcaccaatg cccatcacat
      721 cggccgcatt ggccactggg gcgagcagtg cgcccgtgcc ggcatggtga gcacgcattg
      781 ggtgaacgtg cacggccaca agtcgctggt ggcgccgttc ggcggcgccg agccgcgttt
      841 caccaccaat ccctattgca ccgccgtgcc gcgcaagggc aaggagccga tcgtgctcga
      901 cttcgcgacc agccaggtgg cgatgggcaa ggtgcgggtg gccaacaaca agagggtgca
      961 aatggaggaa ggcctgctga tcgacgcggc cggccagccc accaccgatc ccggcgtgat
     1021 gtacaacccg ccgttcggcg ccatcctgcc gttcggcctt cacaagggcg gcggcctcgc
     1081 ggtgatctgc gacctgctgg ccggcgcact gaccggcggg cgcacccaca gcccgcgcac
     1141 catcaagaag gacggcaccg acatcatcaa caacatgctg tcgatcatca tcgatccggc
     1201 ggcgatgggc ggcacggagc agttcgagga cgaggtcgag accttcatca cctgggtgaa
     1261 gtcggccaag ccgcagcccg gcgtggccga ggttttagca ccgggcgagc ccgagcgcgc
     1321 ccgccgcgtc gaccgcgaga agaacggcgt gccgatcgac accaccacct ggcagcagct
     1381 cgtcgaggtg gcgcgcaagg tgcggctgaa cgacaccgac attccgcgcg cttgagacag
     1441 ggagaccgac catggccaag atgaagctct actactcgcc cggctcgccc tacgcccgca
     1501 aggtgcgggt gacggcgatc gagaccggcc tcgacaagaa gatggacacg gtcaacgtgg
     1561 ccgtctcgcc ggtcgcggcc aacgccgacg tcgacaagca caacccgatc ggcaagatcc
     1621 cggcgctgtc ggtcaagggc atggacctct tcgattcgcc ggtgatctgt gaatatctcg
     1681 accatcagca caagcggcgc cgggtgctgc cgcgcaaggg ccgcgcccgc tgggtggcgc
     1741 tgcgcctgca ggcgatgggc gacgggctgc tcgatgccgc gctgctggcg cgctacgagg
     1801 gcttcctgcg gcccgaggac aagcgctggc ccgactggac caagggccag atcaagaaga
     1861 tcgacggcgt gctcgaccag ctcgaggccg aggccaagtc gctcaagggc aggccgacgc
     1921 tgggcaccat caccgtgggc tgcgcgctgg gctatctcga tttccgcttc ggcgatcaca
     1981 actggcgcgc caagcggccc aagctcgcca aatggtttgg aacattctcc aagctgccgt
     2041 cgatgaagac gacggcaccg ccgctggcgt gaagattggc ggcgtgacag ccgaggaaat
     2101 cattgcgcag ctcggactaa gaccgcatcc cgagggcggc catttcgtcg agaccttccg
     2161 agctccaggt cccggacgca gcgccggcac ggcgatctat ttcctgctga aagccggcga
     2221 acgctcgcac tggcacaggg tcgatgccga cgagatctgg catcactatg ccggcgcgcc
     2281 gctcgaactg tcgatgagcg acgacggccg cagcgtgcgc catctgcggc tcggcagcga
     2341 tttcggtatc ggcgagcagc cgcaggccac agtaccgcgc catgtctggc aagccgcccg
     2401 ctcgctcggc gcctggaccc tggtcggctg cacggtcgct cccgctttcg agtattcagg
     2461 cttcgaactc gccccaccgg gttggacgcc gcgctagcgc cgccacagct cgcgcgaagc
     2521 gagcacggca ccgatggtga ccagcaccgc cgcgatcagc agcgagcccg tcggctcggc
     2581 gaggccgcag gcgatcagca gcgcggtcga gagaatcggc gtggcatagg aaagcgcgcc
     2641 gagtgccctg atgtcgccgc gcttgacggc gtggtcccag agatagaacg cagcacccgc
     2701 cggccccagc ccgagcgcca gcacggcgag ccacgccatc gtcgaggccg gccacaccgt
     2761 gcgctcgaac agcagatggc agatgagcga gagcgccgcc gacaccgcgc agaacgccgc
     2821 gatggcatcg ctcggcgtct cgccgaagcg gcgcgacagc accgagtaga gcgaccaggt
     2881 aaacgcgcag cccagcgcca gcgcgtagcc cagcgcatag gcggcggtga agctcacgcc
     2941 gcggccgaag gcgaggaggg ccacaccggc gaagcccagc agcgcgccca aaagatgcgg
     3001 ccagcccagc cgctcgccgg cgagcggcgc cgacaacagc acgatcagga gcggccacag
     3061 atagttgacc agattggctt cggctggcgg tgcgagctgc agcgccgcga aatagagggc
     3121 gtggtagccg aacaggccgc cgacgcccag cagccacacg cgccacggcc agcccaccag
     3181 ccccgcccag ccgacgccgc gcgcgacggc gcgcgccacg ccgatcgcgg caccgaccgc
     3241 gaacgtcatg gcaaccatct ggaacggcgg aatgggtccg gccgataccg acagcgccgc
     3301 caaggcgccc cacagcgcga tggcggcaaa accggcggcc atcgcgcggc gtcggctgac
     3361 atcgacaacc gtcatagccg ccgcatagac aagactgcgg ctcttgtcga ggttacgata
     3421 cggttgcaac ggagacgcca tgttcgttcg gccggccaac ctgctcagtc atcgtctggc
     3481 gcgcatggcc ttcatcatgg cctgcgtcgc ggcgttgatc gtggcttccg ccggaccatt
     3541 gcaccgctac ctcggcctcg atgtcgaggc ggtcattgcc atcttccgct acggtttcta
     3601 catcgcgatc gcggccgcgg cgctcggtct tgccacggtc gtgccgacac gaccgggcgg
     3661 gcgccggcgc ggcttcgtgg cggtgatcct cgccatcatg gtcggtcttg gcgccgccta
     3721 cgtgccggtc gactggtttt tgcgcgccca gcgcctgccc gagctcaacg acatttcgac
     3781 cgacattgcc aatccgcccg ccctggtcgt caccgcgcaa ctccgtcgcg gcgcgtccaa
     3841 tccgccggcc tatcccggcg cgagcgccgg cgtgctgcag cgggccgcct atcccgatat
     3901 cgcgccggtc gtcctgccgg tggcgccggc cgaagcgttc aagcgcgtcg acaaggcggc
     3961 gatggcgatg gattgggaga tcgtggcccg cgcgcctgac gagggccgcc tcgaggcggt
     4021 cgccaccagc gaatggttcg gctttcgcga cgacatcgtg gtgcgcatcc gccccgacgg
     4081 cgcgggcagc cgcatcgaca tccgctccaa gagccgagtc ggcgaatccg atctcggcgc
     4141 caacgcgcgg cgcatccgcg cgttcatcgc ccggctgaag gactcgtcag gatgacgagg
     4201 acggcagcgt gaactggaag gtgctgcctt tggcgctggt ctcggccagc gcgatgtcgc
     4261 cgccatgggc gagcaccagg tcgcgggcaa tggcaagacc gagcccggcg ccgccggcgc
     4321 ggccgccccg ggtaaagggc cgaaagatct ggtcggcaac ttcctggggc acgcccggcc
     4381 cgtcgtcggc gacctcgatc acgagatgcc cgccgctcgt gcgcgcgcgc acggtgacgg
     4441 tggtcgcact ggcctcgaag gcgttgcggc cgagattgac gaacacgcgg tagagcaggt
     4501 cgcggtcggc ccgcaccggc tggtcggcgc cgacggcgtt gtcccagtga cgcacgatgt
     4561 tgggggtgct gtcctcgccc tgttcctgca gcaccacgcc cacttcgtcg accaggtcgg
     4621 ccagatcgat gttggcgagc cgcggcgtcg gccggtcgcg gacatattcg atggcgtcgc
     4681 tcgccagccg cgccgcgcgg tcgatggtgt tgaggatggt cggcgcgagc gagcgggtgc
     4741 gctcgtcgtc gctgcgcgcc agccggtcgg acaacagccg cgccgtcgac agcatgttgc
     4801 gcaggtcgtg gttgatcttg ttggtcgccg cgcccacttc ggccagccgc gatttctggc
     4861 gcagcgaggc gcgcagctcg cgctgcaggt tctggaactc gcggtcgacg acgccgatct
     4921 cgtcgttgcg ctgggtcggc ggacgctccg ttcccggttc ttccggggcg cggcggaacg
     4981 ccgtcatgtc ggtcgacagg tcctgcaacg gcaggatgac cagccagcgc aaagcgaaat
     5041 agagcagggc cgcggtgaac agcgcgatga tcaccgatag caccaggatg cgcgtggcat
     5101 aggcgtacat ggcgatgcgc atcggcagct cgtcgagcac gatccacacc atggccctgg
     5161 gcaggcgcat cgattcgccg ccgacccgga tatagcgcgc gccgtcatgc accatggccg
     5221 cgagcgcgtc ccagatcagc gggaacacgc cctcttcctt gaggttgtag gagggcatgg
     5281 tggggcgcgg ctcgatgttc atcaaggcgc gcttgggctt gttgggttcg accagcacga
     5341 cggcgtcgac tcgcgcattg ttgagcaagg cgcgcttgac ctcctcggtc accatgttgt
     5401 cgggcgtggc gtcgagcgcc agcgcggcca aggtgccgct ttcgatgagc tgctcgagat
     5461 agaccatgcg gaagcgggcg atcgacggca ggaagatcag gatctcggcc gtcatgacgg
     5521 cggcgatcac cagccccagg atgcgccacg acaggccgaa aacggggctt cggcggcgcg
     5581 cggcgcgggc cgattcggcc ggaacagtga catcggcggt catggccggc ggactctagc
     5641 ggagcaggcc gcgttggcct agttcgacgg acccggctgc ctagggagcg gtcacgacgc
     5701 gatagtagac gccgttggcg ccataggccg gtgcgaacca cagaccgtcg ctgcagctgt
     5761 agtacggctg gctcccgacc gcgcgatagg cacagcccgc aggcagcgtg ccatagagcg
     5821 ttcccggcgg gttggctgcg ctggtggcgg atgccgtgcc ggccgtgacg cccgccgaat
     5881 aggccgcctg cgtgttggcg gtattggcgg ccgcggcgcc gaccgcggcg ccggccacca
     5941 tgcccgcggc gaccgcgccg ccggtgttcc aaccgccgca attgtagcag ccggcgccat
     6001 aggcgttgac gacggtgggc gcgttgtagg cgccgtagta gccgccatgg tagtaatccg
     6061 gactgccata ataggtgtgg ccgccggtgc cggtcgccgt ccaggcgccg ccgccgcccg
     6121 tcgccgtgcc gccgtggtag ccgtccgctc gccacgagcc gtcgccgccg cttgcggtgc
     6181 cgccgcgcca gccgctcgcg ttccaggtcc cgtcgctgcc gctggcggtg cccccgcgcg
     6241 cgccggtcgc tttccacgtc ccgtcgccat tgccccaggc gtggccgcca cgcgcatcgg
     6301 cgccgcccca cgccgagtgg ccaccccagc cgccggcatg cacaaaggca tcggccgcgg
     6361 cgagtggcag ggcgatcgcc gctacggcgg cgagaagcag ggtcttgttc atcgcgcgct
     6421 cctgtctatc actttttcgt ggcccaaccg gtgatcggta ccacgggcgc cacgaagtcg
     6481 atgcgcctcg cgcccgccag cgcggcggag gtgaagctgt cggcggcgac cggctggtcg
     6541 agcttccagt ccgacaaggc gacggtgtgg cgatagtgag cgggatcgcc gacgaagatg
     6601 gcgcgagcca ggcgcggcag cttgtcgtcg ctgccgatcc agagctgaac gtgcgcgtac
     6661 ttgccgacca gcaccacgat atcggtcggc acgccggcca ccacgttcga tttgccgacg
     6721 acgaaggcga tggtgaggtt ctcgctgatc gccttcagcg ggtcggagac gacgatatcg
     6781 gtgaagggga agtagatcgc cgcgtactga aaggcggcgc gcagcatggc gtcgatcgtg
     6841 tcgggagcct gggcgacggc taccaggttg gccgcgggct cgtaggcctg cgccgtcttg
     6901 ccgtcgtaat agaactccgt gcgcggcccg tcgcccggcg tgatgacgct gagcttgtcg
     6961 ggacgctgca aggtcacttg cgaacgcgtg aaataagcca acggctcgcc ggtgcggtcg
     7021 gcgctctcat aggttgccac cgcagtgaag ctcatggtct ttgctgcggc gaggcgatcg
     7081 ctcatcgcct tgaccagcgc catggcggcg ggctcgattt cgacttttac accgagattg
     7141 gcaggcgatg ccggcgtcgc cgccggttgt tgttgctgcg cttgcgctgc gggcaggatc
     7201 atggccgtca acagagccgc tgcgacgaga cggatcacgg cgaaaattgt catctgctgc
     7261 cccctgaccg cacaatgatc ggcatttctg gaggcgaaag caatcgcctc accacaccgg
     7321 caggcgcgcc agcaaacgta ccagcttgcg cgtgcgcggg ccgaacaagg tggcggcaaa
     7381 atagctgccg gcggcccgct tgctcgcttc gcccagggtc ggatagggcg gcacgaagct
     7441 cgccagcgcc gagatcttca agcgcttggc gatggcgaga caccagggct ggatcagctc
     7501 gccggcatgg ggcgccacga tggttgcacc gaggatgcgg ccgcgacggt cggtgatcgc
     7561 cttcaccatg ccttcggtct cgcgttcggt ctgggcgcgg tcgttctcgg ccaatttcca
     7621 gcgcaagacc ttgatcgcct cgccgtgctt ctcgcgcgcc gcatgctcgc tcaggccgac
     7681 ctgcgccagc tccgggtcgg tgtaggtgga ccacggcacg atcgaggcgt cgagccgcgc
     7741 cggtgcgcgg aacaaggcgc cgcgaatgaa cagcgaggcc tcgtagcccg ccatgtgggt
     7801 gaaggcgtaa agcccgttgc agtcgccgat cgcccagaca tggcggttgg acgtcctctg
     7861 cgaggcgtcg accgtgatgc cctgcctggt gtgggcgacg ccggctattt cgagatcgag
     7921 cctctcgaca atcggcgccc gcccggcagc gaccagcaga tgggtggcgt cgagccgctc
     7981 gccatcctcg aggatcaccg tcatgccggc ggcggcgcgc tcgacccggg cgatcttggc
     8041 gggcgcgcgc agatcgatcc cttccgccct gagccgcttc agcacgatag cggagagttc
     8101 ggcgtcgtcc ttggcaagga atgcggcggc ttcgagcacc gtcaccttcg accccagccg
     8161 ccggtgcgcc tgggccaatt caagcccgat cgggccgccg ccgatcacga tcagatggtc
     8221 gggcagggtg cggttggcga agaccgtctc gttggtgaga tagggcacat cggccaggcc
     8281 cgggatcggc ggcgccgtcg gccgcgagcc cgtcgccagc acgatgcggc ggctcctgat
     8341 gtggtgcggg ccggctaaaa gctcggtgcg gccgacgaag cgcgcctcct ccttcagcac
     8401 gcggac
//
LOCUS       DASWGA010000216         1642 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_280913, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000216 DASWGA010000000
VERSION     DASWGA010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280913"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..254
                     /locus_tag="VF991_05255"
     CDS             <1..254
                     /locus_tag="VF991_05255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX9555880.1"
                     /translation="PQAIRIAVPLLTNRAIAITKGTALGTAVSLPELLGRAQSAMAIA
                     ANPSPLTLAAALYLVFFVPLVIASRWIERASGPAPAHRR"
     gene            257..940
                     /locus_tag="VF991_05260"
     CDS             257..940
                     /locus_tag="VF991_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX9555881.1"
                     /translation="MEALKLFLDNFADWDSVVRVWPLLWQGLQLTVLLAIVTVPIAVA
                     AGLLIAVVYSFHHKWTNVALLVWIDLFRSFPVLVLLILIFYGLPFLGLKLPSFAACVL
                     ALVLNYSGYYGEIFRAGIESVPLGQREAALAMGLRPLQAIFLVILPQAISRVLAPLAS
                     NSLELVKTTSIASLVALPELLRSARVAQEQTYNPTPLTAAAILFFVLLWPFARWVAKL
                     ERDMIVRRQ"
     gene            937..>1642
                     /locus_tag="VF991_05265"
     CDS             937..>1642
                     /locus_tag="VF991_05265"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012760383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555882.1"
                     /translation="MKRLAGKTALITGASSGIGRAIAHKFAAEGARLLLMDVTETVRE
                     GGEPTHKILGVSFFQGDVSSEADADEAVRRAAAPTGRLDILINDAVVNFGPKLAETSL
                     ADWNATMAVNLTGVFLMCRAAIRQMQGQEIRNEVRGRIVNISSQHGMIAAPENAAYGV
                     SKAGVVYLTRQVAVDYAKEGIVCNAVAPGKILTGKTGRAIEPRWLDYSQARTPLPRLG
                     RSEDVANAVLFLASDEA"
BASE COUNT          249 a          603 c          506 g          284 t
ORIGIN      
        1 tgccccaggc gatccgcatc gccgtgccgc tgctcaccaa ccgcgccatc gccatcacca
       61 agggcacggc gctgggcacc gcggtgtcgc tgcccgagct tttaggccgc gcccaaagcg
      121 ccatggcgat cgccgccaac ccctcgccac tgacgctggc cgccgcgctc tatctcgtct
      181 tcttcgtacc gctggtcatc gccagccgct ggatcgagcg cgcctccggc cccgccccgg
      241 cgcaccgtcg ctgaccatgg aagcgctaaa actcttcctc gacaatttcg ccgactggga
      301 ctcagttgtg cgcgtctggc cgctgctgtg gcagggcctg cagctcaccg tcctgctcgc
      361 catcgtgacc gtgcccatcg ccgtcgccgc cggcctgctg attgcggtgg tctacagctt
      421 ccaccacaaa tggacgaacg tggcgctgct ggtctggatc gacctgttcc gctccttccc
      481 cgtgctggtg ctgctgatcc tgatcttcta cggcctgccg ttcctcggcc tgaaactgcc
      541 gagcttcgcc gcctgcgtgc tcgccctggt gctgaactat tccggctatt acggcgagat
      601 cttccgcgcc ggcatcgaat cggtgccgct tggccagcgc gaggcggcgc tcgccatggg
      661 gctgcgaccg ttgcaggcga tcttcctggt gatcctgccg caggcgatct cgcgcgtgct
      721 ggcgccgctt gcctccaatt cgctggagct ggtcaagacc acctcgatcg cctccctggt
      781 ggcgttgccc gagctcctgc gctcggcgcg cgtcgcccag gagcagacct ataatccgac
      841 gccgctcacc gcggcagcca tcctgttctt cgtgctgctg tggccgttcg cgcgctgggt
      901 ggccaagctg gagcgcgaca tgatcgtgag gcggcaatga aacgactcgc cggcaagacc
      961 gcgttgatca ccggcgcctc ctcgggcatc ggccgcgcca tcgcgcacaa gttcgccgca
     1021 gagggcgcac ggctcctgct gatggacgtg acggagacgg tgcgcgaggg cggcgagccc
     1081 acgcacaaaa tcctgggcgt gtccttcttc cagggcgacg tttcgagcga ggccgacgcc
     1141 gacgaagcgg tacgccgcgc cgcggcgccg accggtcggc tcgacatcct gatcaacgac
     1201 gcggtggtca atttcggccc caagctcgcc gagacgagcc tggcggactg gaatgcgacc
     1261 atggcggtca acctgaccgg cgtattcctg atgtgccgcg ccgccatccg gcaaatgcag
     1321 ggccaggaga tcaggaacga agtgcgcggg cgcatcgtca acatctcttc ccagcacggc
     1381 atgatcgccg cccctgaaaa cgccgcctac ggcgtctcca aggcgggcgt ggtctatctg
     1441 acgcggcagg tcgccgtcga ctatgcgaaa gaaggcatcg tctgcaacgc cgtggcacca
     1501 ggcaagatcc tgaccggcaa gaccggccgc gccatcgaac cgcgctggct cgactacagc
     1561 caagcccgca caccgctgcc gcggctcggc cgctccgagg acgtcgccaa cgccgtcctc
     1621 ttcctcgcct ccgacgaagc ct
//
LOCUS       DASWGA010000217         3179 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_652072, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000217 DASWGA010000000
VERSION     DASWGA010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3179
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_652072"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..532)
                     /locus_tag="VF991_05270"
     CDS             complement(47..532)
                     /locus_tag="VF991_05270"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic-ring-hydroxylating dioxygenase subunit
                     beta"
                     /protein_id="HEX9555883.1"
                     /translation="MTQPLARPEAEDFLFREASLLDAWRLEEWANLFTDDGEYLVPAT
                     DAPDGVPGTSLYLIYDDRHRLGERARRLLKKTAHAESPRSRTRHMSSNVMVAAAEGEV
                     TLVSCNFVVFRSRLEKTDIYPGHAEYRLVRAPDGLRIRSKKAILDVDVLRPQGKVSII
                     L"
     gene            complement(529..1845)
                     /locus_tag="VF991_05275"
     CDS             complement(529..1845)
                     /locus_tag="VF991_05275"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX9555884.1"
                     /translation="MTALEHRCGSLAGLIIDDRQAARFKVNRDVFAEDDILALERERI
                     FSRCWLYLGHVSEVPAPGSFVARRVGGRPLILTRDREGTLNALYNTCPHRGALVCRER
                     AGNRRAFQCGYHAWAFDETGRFLGMPGREALPTNAGDGGQFDLVRVEHMEEFRGFVFV
                     CFDRGAQPLVDYLAGAAEYLAYVADQGENGMEIVEGTQDYSIAANWKLLQENSVDGYH
                     GQPTHVTYFDYLRSRDGTTTNFGGSGPMGWVKNLGNGHAVSESIGLLPWGRPYARWAP
                     GWGEEAKPEVEELNRRIMARLGPERGNVVANGDRNLIVFPNLVVNDIMATTVRTFYPV
                     RPDYMEVSAWSLAPIGESATSRDRRMRNFVEFLGPAGFASPDDIEMLELCQRGYANRA
                     AAPWNDISRGMLSNAPKKTDELQMRTFWRRWRQLVAGDPSLELAGP"
     gene            1979..2947
                     /locus_tag="VF991_05280"
     CDS             1979..2947
                     /locus_tag="VF991_05280"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9555885.1"
                     /translation="MERRKALGLMTASALGALAGRAVGQDRQGMIRIVVPYAAGGQTD
                     SMARLMSESMQKTLGRTIIVDNRPGAAGLIGTKNVQLAPPDGEAVLFHNAGFVALPML
                     MKAATYDPIRDFDAVAMVGNGPNFLMVTDSVPARTVPEFLAYARSQPQGLASANSGIN
                     SAGHISSLMLEKLAGIKLVHVPYKGSAEVTRALLGGDVQMQISVTTDSLNPYIKNGKV
                     RILAVATKERTSLAPDVPTIGEFLPGYSIDGWFGILAPAHTPLATREVLSAAIKQALD
                     EPTIRERFAALYMEVAHRGPKEFATIIEESVGYFRKIVDDLQLVAQ"
     gene            complement(2958..>3179)
                     /locus_tag="VF991_05285"
     CDS             complement(2958..>3179)
                     /locus_tag="VF991_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically inducible protein C"
                     /protein_id="HEX9555886.1"
                     /translation="VVVRLRHAKVHAEDCADCEKPTAKIDRIDKSLEFIGALDDAQRS
                     RLVEIADQCPVHRTLTSKIDIRTAVEPAG"
BASE COUNT          538 a         1030 c         1069 g          542 t
ORIGIN      
        1 ccagtcgcgt ttcccgcatt ggtacgaccg atgcgccggt ttggcgtcag agaatgatgc
       61 tgacctttcc ctggggacgc agcacgtcga cgtcgaggat cgccttcttg ctgcggatgc
      121 gcagcccgtc gggtgcgcgg accagccggt attcggcatg tccgggatag atgtcggtct
      181 tttccagccg gctgcggaag accacgaaat tgcaggagac cagcgtcacc tcgccctcgg
      241 ccgccgcgac catgacgttg ctgctcatgt ggcgcgtgcg cgagcgcggt gattcagcgt
      301 gagccgtctt cttgagcagg cgcctggcgc gttcgcccag ccggtggcgg tcgtcgtaaa
      361 taaggtaaag cgacgtgccg ggcacgccgt ccggcgcatc ggtcgccggg acgagatatt
      421 cgccatcgtc ggtgaacagg ttggcccatt cctcgagccg ccaggcgtcg agcaggctgg
      481 cttcgcggaa caggaaatcc tcggcctcgg ggcgggcgag tggttgggtc atggcccggc
      541 gagctcgagc gagggatcgc cggcgacgag ctgccgccag cggcgccaga aggtacgcat
      601 ctgcagctcg tcggtcttct tgggcgcgtt gctcagcatg ccgcgcgaga tgtcgttcca
      661 cggcgccgcc gcgcggttgg catagccgcg ctggcagagc tccagcatct cgatgtcgtc
      721 gggtgaggcg aagccggccg gcccgaggaa ttcgacgaag ttgcgcatgc gccggtcgcg
      781 cgaggtggcg ctttcgccga tcggcgccag cgaccaggcg ctcacctcca tgtaatccgg
      841 ccgcaccgga tagaaggtgc ggaccgtcgt cgccatgatg tcgttcacca ccaggttcgg
      901 gaagacgatc aggttgcgat cgccgttggc gacgacattg ccgcgttcgg gtccgagccg
      961 cgccatgatc cggcgattga gctcctcgac ctcgggcttc gcttcctcgc cccagcccgg
     1021 cgcccagcgc gcatagggcc ggccccacgg cagcagcccg atcgattcgg aaacggcgtg
     1081 gccgttgccc aggttcttga cccagcccat cgggccggaa ccgccgaaat tcgtggtcgt
     1141 gccgtcgcgc gagcgcaggt agtcgaagta ggtcacgtgg gtcggctggc cgtggtagcc
     1201 gtcgacgctg ttttcctgca gcagcttcca gttggcggcg atcgagtaat cctgcgtgcc
     1261 ctcgacgatc tccatgccgt tctcgccctg gtcggcgacg taggcgaggt attcggcggc
     1321 gccggcgaga tagtcgacca gcggctgggc gccgcgatcg aagcagacga agacgaagcc
     1381 gcggaactcc tccatgtgct cgacgcgcac caggtcgaac tgcccgccat cgccggcgtt
     1441 ggtcggcagg gcctcgcggc caggcatgcc gaggaaacgg cccgtctcgt cgaacgccca
     1501 ggcatgatag ccgcattgga aggcgcgccg attgccggcg cgttcgcgac agaccagcgc
     1561 gccgcggtgc gggcaggtgt tgtagagggc gttgagcgtg ccctcacggt cgcgcgtcag
     1621 gatcaagggg cgaccgccca cccgacgggc gacgaagctg ccgggcgcgg ggacttccga
     1681 cacatggcca agatagagcc agcagcggct gaaaatgcgc tcgcgctcga gtgccaggat
     1741 gtcgtcctcg gcgaagacat cgcgattgac cttgaaccgc gccgcctgtc ggtcgtcgat
     1801 gatcaatccg gcaagcgatc cgcagcgatg ctccagcgcc gtcatcgcgc actccctaat
     1861 ggtcagacct atatttcgga cagcggcaga tagcgttttc ccgttgtacg agataatggt
     1921 atgacaaaaa taccaatgtc aaacggccgc agaaccaacc cagggaacgg agacgccgat
     1981 ggagcgccgc aaagcactcg gactgatgac cgcgtcggcg ctgggcgcgc tggccggccg
     2041 ggcggtcggg caggatcgcc agggcatgat ccgcatcgtc gtgccctatg ccgcgggcgg
     2101 ccagaccgat tcgatggcgc ggctgatgtc ggaatcgatg cagaagacac tgggccgcac
     2161 catcatcgtc gacaaccgtc cgggcgccgc cgggctgatc gggaccaaga acgtgcaact
     2221 cgcgccgccg gacggcgagg ccgtgctgtt tcacaatgcc ggcttcgtgg cacttcccat
     2281 gctgatgaag gccgcgacct acgatccgat cagagacttc gacgccgtgg cgatggtcgg
     2341 caacggcccc aacttcctga tggtcactga cagcgtgccg gcgcgcaccg tgccggaatt
     2401 cctggcctat gcgcgctcgc agcctcaggg tctcgccagc gccaactcgg gcatcaattc
     2461 ggcgggccac atctcctcgc tgatgttgga gaagctggcc ggcatcaagc tggtgcacgt
     2521 gccctacaag ggctcggccg aggtgacgcg cgcgctgctg ggtggcgacg tgcagatgca
     2581 gatcagcgtc accaccgatt cgctcaatcc ctacatcaag aacggcaagg tccgcatcct
     2641 ggccgtcgcc accaaggagc gcacgtcgct ggcgcccgac gtgccgacca tcggcgaatt
     2701 cctgccgggc tattcgatcg acggctggtt cggcatcctg gcgcccgcgc acacgccgct
     2761 ggcgacgcgc gaggtcctat cggccgccat caagcaggcg ctcgacgagc ccaccatccg
     2821 ggagaggttt gcggcgctgt acatggaagt ggctcatcgc ggccccaagg agttcgcgac
     2881 gattatcgag gaatcggtcg gctacttcag aaagatcgtc gatgacctgc agcttgtggc
     2941 gcaataggcc ccgagtgtca tccggccggc tcaaccgccg tccggatgtc gatcttcgat
     3001 gtcagcgtgc ggtgaaccgg gcactggtct gcgatctcga ccagccggct tcgctgcgcg
     3061 tcgtcgaggg ctccgatgaa ttccaggctc ttgtcgatgc ggtcgatctt ggctgtgggc
     3121 ttctcgcaat cggcgcagtc ctcggcatga accttggcat ggcgcaaccg cacgacgac
//
LOCUS       DASWGA010000218         2776 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_911595, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000218 DASWGA010000000
VERSION     DASWGA010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2776
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911595"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(261..2702)
                     /locus_tag="VF991_05290"
     CDS             complement(261..2702)
                     /locus_tag="VF991_05290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response DEXH box
                     helicase"
                     /protein_id="HEX9555887.1"
                     /translation="MGLPDLFSRWFESRGWTPRAHQLALIALAQRAKSALLIAPTGGG
                     KTLAGFLPSLIELTERRQRGEDLAHKKGKGELHTLYISPLKALATDIRRNLEIPIAEM
                     KLPVRAESRTGDTPQSRRLRQRERPPDLLMTTPESMALLLSYPDAARFFASLKCVIVD
                     ELHSFATSKRGHHLALCLARVASLAPQVRFVGLSATVANPPELAEFLAVKDEVEIVRG
                     EPGAQPVVSIIDAHERLPWGGHMGHHAVPEVYNIIRQHKTSIIFVNTRAQAELVFDTL
                     WRINEDNLAIGLHHGSLAVEQRRKVEAAMAAGKLRAVVATSSLDLGIDWGDVDLVIQM
                     GAPKGVSRLMQRIGRANHRLDEPSRAMIAPANRFEVLESLAALEAIEARELDGDPPRP
                     ACLDVLAQHIVGTACAQPIDRDAFYEEVRTTQPYRDLPRQDFDDTFDFVATGGYALAA
                     YDRWHRLKKLPDGRWMLASPMVARQFRMNVGTIVELPLIKVKMRRGPILGEVEEAFIQ
                     GLVPGDTFVFAGRLLRFDGVKELVAQCSPATGGDPKIPAYGGGRLPLSTFLAERVRGI
                     LQDPTRHPKLPAEVREWLRIQRIRSTLPAASRLLIEGFPRGSKQFIVAYCFEGRNAHQ
                     TLGMLLTRRMERMGLKPLGFVATDYVLGIWGLRPPTKAELDRLFDEDMLGDDLEAWMD
                     ESSMLRRSFRNVAVIAGLIERRFPGEEKSRRQVTFSSDLIYDALRKHEPDHILLRATR
                     QDAAWQLADLRRLGDLLRRAKGRIDYRRLDRISPLAVPILLEIGKERVLDGTAEDELL
                     DIAAQELIDEATRLS"
BASE COUNT          446 a          945 c          943 g          442 t
ORIGIN      
        1 gcgatgaggt ccgcaccgat ccgggcgacc gccgcgtcgc cgtgcccgaa gccaacgcca
       61 cccgacatcg cgcgcgcaga ggctcgccga ccaagcccgc ttatgaccgc agccgcatcg
      121 tgctcgaccg gcccaagatc aagatcgcct cgcgcgactt ccattgaatc atctctgtca
      181 tcctgagcga agcgaaggat ctcatgccca tggcaagcgg cgatgagatc cttcgcttcg
      241 ctcaggatga cagcgcggct ctacgacaac cgcgtcgcct cgtcgatcag ctcctgggcg
      301 gcgatgtcca gaagctcgtc ctcggcggtg ccgtcgagca cccgttcctt gccgatctcc
      361 agcaggatcg gcacggcgag cggcgagatg cggtcgaggc ggcggtagtc gatgcggccc
      421 ttggcgcggc gcagcagatc gcccaggcgt ctgaggtcgg cgagctgcca ggcggcgtcc
      481 tggcgggtgg cgcgcagcag gatgtggtcg ggctcgtgct tgcgcagcgc gtcgtagatc
      541 aggtcggagc tgaaggtgac ctggcggcgc gacttctcct cgccgggaaa acgccgctcg
      601 atcaggccgg cgatcaccgc gacgttgcgg aacgagcggc gcaacatgct cgattcgtcc
      661 atccaggcct cgagatcgtc gcccagcatg tcctcatcga acagccgatc gagctcggcc
      721 ttggtcggcg gccgcaagcc ccagatgccc agcacatagt cggtagcgac gaagcccagc
      781 ggcttcagcc ccatgcgctc catgcggcgg gtcagcagca tgccgagcgt ctggtgcgcg
      841 ttccggccct cgaagcaata ggcgacgatg aactgtttgc tgccgcgggg gaatccttcg
      901 atcagcaggc ggctggccgc cggcagggtc gagcgaatgc gctggatgcg cagccattcc
      961 cgcacctcgg ccggcagctt gggatgccgc gtcggatcct gcaggatgcc gcgcacccgc
     1021 tcggccagga aagtcgagag cggcaggcgg ccgccgccat aggcagggat cttgggatcg
     1081 ccgccggtcg cgggcgagca ctgcgccacc aattccttca cgccgtcgaa gcgcagcagg
     1141 cggccggcga agacgaacgt gtcgcccggc accaacccct ggatgaaggc ctcctcgacc
     1201 tcacccagga tcggcccgcg ccgcatcttc accttgatca gcggcagctc gacgatggtg
     1261 ccgacattca tgcggaactg gcgcgccacc atcggcgagg ccagcatcca gcggccgtcg
     1321 ggcagctttt taagccgatg ccagcggtcg taggccgcca gcgcatagcc gccggtggcg
     1381 acgaaatcga aggtgtcgtc gaaatcctgg cgcggcaggt cgcgataggg ctgggtggtg
     1441 cgcacctctt cgtagaaagc gtcgcggtcg atcggctggg cgcaggcggt gccgacgata
     1501 tgctgggcca gcacgtcgag gcaggctggc cgcggcggat cgccgtcgag ctcacgcgcc
     1561 tcgatcgcct ccagcgccgc cagcgattcc agcacctcga agcggttggc cggcgcgatc
     1621 atggcgcggc tcggctcgtc cagccggtgg ttggcgcggc cgatcctctg catcaggcgg
     1681 ctcacgccct tgggtgcgcc catctggatc accagatcga cgtcgcccca gtcgatgccg
     1741 aggtcgagcg aggaggtcgc caccacggcg cgcagcttgc ccgccgccat cgccgcctcg
     1801 accttgcgcc gctgctcgac cgccagcgag ccgtgatgca gcccgatcgc cagattgtcc
     1861 tcgttgatgc gccacaacgt gtcgaagacg agctcggcct gcgcgcgcgt gttcacgaag
     1921 atgatcgagg tcttgtgctg gcggatgatg ttgtagacct cgggcacggc gtgatggccc
     1981 atatggccgc cccacggcag gcgctcgtgg gcgtcgatga tgctgacgac gggctgagcg
     2041 ccgggctcgc cccgaacgat ctcgacctcg tctttcaccg cgagaaactc cgccagctcg
     2101 ggcggattgg cgaccgtcgc cgacaggccg acgaagcgca cctgcggcgc cagcgacgcc
     2161 acgcgggcaa gacaaagcgc caggtgatgg ccgcgcttgc tggtggcgaa agaatgcagc
     2221 tcgtccacga tcacgcattt caggctggcg aagaagcgtg cggcgtcggg atatgaaagc
     2281 agcagcgcca tcgattcggg cgtggtcatc aagaggtcgg gcggccgctc gcgctggcgc
     2341 agccggcggc tctgcggcgt gtcgccggtg cggctttcgg cgcgcaccgg cagtttcatc
     2401 tcggcgatcg gtatctcgag gttgcggcgg atgtcggtcg ccagcgcctt gagcggcgag
     2461 atgtagagcg tgtgcagctc gcccttgccc ttcttgtgcg cgagatcctc gcctcgctgg
     2521 cggcgctcgg tgagctcgat cagcgacggc aggaagcccg ccagggtctt gccgccgccg
     2581 gtcggcgcga tcagcagtgc gctcttggcc ctttgcgcca gcgcgatcag cgccagctgg
     2641 tgggcgcgcg gcgtccatcc acggctttcg aaccagcgtg aaaacaggtc gggaagcccc
     2701 atatcttccg agtaggatcc agcacgctca atgaccgtcg acaccctcaa tccccgttcc
     2761 ccccgctcct ggctct
//
LOCUS       DASWGA010000219         3404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_783389, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000219 DASWGA010000000
VERSION     DASWGA010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3404
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_783389"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..960
                     /locus_tag="VF991_05295"
     CDS             <1..960
                     /locus_tag="VF991_05295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HEX9555888.1"
                     /translation="FLIAGASAIVDRHDVVPAGIEEAGGRVSHFGMPVDPGNLLLTAE
                     LDGKPVLGLPGCAKSPKYNGFDMVLERLAAGLPVGRAEIVRMGAGGLLAEIASRPQPR
                     DDSDGEDTSPQQAPRVAVLLLAAGRSTRMGGPNKMLADANGQPLVVHAVKAALASQAV
                     EVVVVLGHMADDVRAAIEKALPSKSRLRFVTNPDFAEGLSTSVRTGIGALSSNIDAAI
                     VQLGDMPGVGAPLLDRLMAAFSPVEGRAICVPTVGGKRGNPVLWARRFFPEMAKLAGD
                     AGAKHLIGEHADLVCEVEMAGEAAVTDIDTPEALAAWRARSPL"
     gene            957..2177
                     /locus_tag="VF991_05300"
     CDS             957..2177
                     /locus_tag="VF991_05300"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SufS family cysteine desulfurase"
                     /protein_id="HEX9555889.1"
                     /translation="MSFNVAAVRRQFPILAEIIDGQPVHYLDNGASAQTPDVVLDAVR
                     TYETTGRANVLRGVHRLAERATEAYENARIEVATFLGVEPMEIVFTGGCTAAINLVAY
                     SYGSLLKPGDRILLSELEHHSNIVPWQLLRARSGVELDMIPVTVEGRIDLDALPKLLT
                     PRTRLVSLAHVSNVTGALLDVRRVVTLAKTVGAKVMLDGAQRAPHGPVDLSSLGIDFY
                     VFAGHKAYGPNGVGVLWARSDLLEAMPPFHGGGSMIGRVTFAETTWAPPPRRFEAGTP
                     PIGPAIGLGAACKWMRGLDWVEAHAHEMALVQRLMDGLQKIDGTQILGPASLQNRYPV
                     VSFLLDGVHPHDVAQTLDSFGVAVRAGHHCAQPLMDRFDLDGTTRVSMAPYNDNTDID
                     ALLTGVQHAARTLR"
     gene            2174..2581
                     /locus_tag="VF991_05305"
     CDS             2174..2581
                     /locus_tag="VF991_05305"
                     /inference="COORDINATES: protein motif:HMM:NF013738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein"
                     /protein_id="HEX9555890.1"
                     /translation="MSDQLYQDRIVALAKAKTGAGKLAQPTRSGHRDNPLCGDRVTID
                     ITLDGQGHIAEIAHQVRGCLLCQASASALSSVAVGRDKAGIEALRHDAERAIGREDGV
                     PAEPFAAFTPVKSHKSRHECVLLPFEALQEALS"
     gene            complement(2656..3276)
                     /locus_tag="VF991_05310"
     CDS             complement(2656..3276)
                     /locus_tag="VF991_05310"
                     /inference="COORDINATES: protein motif:HMM:NF025850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HEX9555891.1"
                     /translation="MELFASPMACSLASHITALEAGLPVRVRFVENKKTDDGGDYYKI
                     SAKGYVPALRLDDGQVLNEGPSVLQYLADRKPETGLAPPWGTLERYLLIDTLNYLSTE
                     VHKRIFANVFNPKAAEPTKEAAKALLEPTLDYLAKRLGSEEYLVGGRFTVADAYLVTL
                     LNWFAFVGVDLKKWPTIAAYHQKHLQRPAVAQAMGVEMAERKRRAA"
BASE COUNT          523 a         1167 c         1160 g          554 t
ORIGIN      
        1 ttcctgatcg ccggcgcctc ggcgatcgtc gaccgccacg atgtggtgcc ggccggcatc
       61 gaggaggcgg gcgggcgggt cagccatttc ggcatgccgg tcgatcccgg caacctgctg
      121 ctgacggccg agctcgatgg caagccggtg ctcggcctgc cgggctgcgc caagtcgccc
      181 aagtacaacg gcttcgacat ggtgctggag cggctggccg ccggcctgcc ggtcggccgg
      241 gccgagatcg tgcgtatggg cgccggcggg cttttggccg agatcgccag ccgcccccag
      301 ccgcgcgacg acagcgacgg cgaggatacc agcccgcaac aggcgccgcg ggtcgccgtg
      361 ctgctgctgg ccgccggtcg ctcgacgcgc atgggcggac cgaacaagat gctggccgac
      421 gccaatggcc agccgctggt cgtccatgcc gtcaaggcgg cgctcgcctc gcaggctgtc
      481 gaggtcgtgg tcgtgctggg tcacatggcg gacgacgtcc gcgccgccat agagaaggcg
      541 ctgccgtcca agtcgcggct gcgattcgtc accaacccgg atttcgccga gggcctcagc
      601 acgtcggtgc gcaccggcat cggcgcgctc agcagcaaca tcgacgcagc catcgttcag
      661 ctcggcgaca tgcccggcgt cggcgcgccg ttgctcgacc gcctgatggc ggcgttcagc
      721 ccggtcgaag gccgcgcgat ctgcgtgccg acggtcggcg gcaagcgcgg caaccccgtg
      781 ctgtgggcgc gccgcttctt tccggagatg gcgaagctgg cgggtgatgc cggcgccaag
      841 catttgatcg gcgaacatgc cgacctcgtc tgcgaggtcg agatggcggg cgaggcggcc
      901 gtcaccgaca tcgacacgcc cgaggcgctg gcggcgtggc gggcgcggag cccgctatga
      961 gcttcaacgt cgccgccgtc cgccggcagt ttcccatcct ggccgagatc atcgacggcc
     1021 agccggtcca ttatctcgac aacggcgcct cggcgcagac gcctgacgtc gtcctcgacg
     1081 cggtgcggac ctacgagacg acgggccgcg ccaacgtgct gcgcggtgtc catcgcctgg
     1141 ccgagcgcgc gaccgaggcc tacgagaatg cccgcatcga agtggcgacg ttcctcggcg
     1201 tcgagccgat ggagatcgtg ttcaccggcg gctgcacggc ggcgatcaac ctcgtcgcct
     1261 attcctatgg ctcgctgctg aagccgggcg accgcatcct gctgtccgag ctggagcatc
     1321 attccaacat cgtgccctgg cagcttttgc gggcgcgcag cggcgtcgag ctcgacatga
     1381 ttccggtcac ggtcgaaggc cgcatcgatc tcgacgcgct gccgaagctg ctgacgccca
     1441 ggaccaggct ggtctcgctc gcccatgtct ccaatgtcac cggcgcgctc ctcgatgtgc
     1501 gccgggtggt caccctggcc aagacggtcg gcgccaaggt gatgctggac ggcgcccagc
     1561 gcgcgccgca cggcccagtc gacttgtcgt ccctcggcat cgatttctac gtcttcgccg
     1621 gccacaaggc ctacgggccc aacggcgtcg gtgtgctgtg ggcaaggtcc gacctgctcg
     1681 aggccatgcc gccgttccat ggcggcggct cgatgatcgg ccgcgtcacc ttcgccgaga
     1741 cgacctgggc gccgccgccg cgccgcttcg aggccggcac gccgccgatc gggccggcga
     1801 tcggcctggg cgccgcctgc aaatggatgc gcgggctcga ttgggtcgag gcgcacgcgc
     1861 acgaaatggc gctggtgcag cggctgatgg atgggctgca gaagatcgac ggcacgcaga
     1921 tcctgggacc ggccagcctg cagaaccgct atccggtcgt gtcctttctg ctcgacggcg
     1981 tgcatccgca cgacgtggcg cagaccctcg attcattcgg cgtcgcggtg cgtgctggcc
     2041 accattgcgc gcagccgctg atggaccgct tcgacctcga cggcacgacg cgcgtctcca
     2101 tggcgcccta caacgacaac accgacatcg acgccctgct gacgggcgtc cagcacgccg
     2161 cccgcacctt gcgatgagcg accagctcta tcaggaccgc atcgtcgcat tggccaaggc
     2221 aaagaccggg gcgggcaagc tcgcccagcc gaccaggtcg gggcaccgcg acaatcccct
     2281 gtgcggcgac cgcgtgacca tcgacatcac gctcgacggg cagggacaca tcgccgagat
     2341 cgcccatcag gtgcgtggtt gcctgctctg ccaggcctcg gcgtctgctc tgtcgtccgt
     2401 cgcggtcggc cgcgacaagg ctggtatcga agccctccgc cacgacgccg aacgggcgat
     2461 cggccgcgaa gacggcgtgc ccgccgaacc gttcgccgcc tttacgccgg tcaagtcgca
     2521 caagtcccgc cacgagtgcg tcctgctgcc ttttgaggca ttgcaggaag cgctgtctta
     2581 gtcttccgga ccgcgagcct ccggctcgct catgatcatg agcgcgcaag atgcgcgcgg
     2641 tccggaagag catgactacg ctgcgcggcg cttgcgctcg gccatctcga cgcccatcgc
     2701 ctgggcgacg gccggacgct gcaggtgctt ctggtgatag gcggcgatgg tcggccactt
     2761 cttgaggtcg acaccgacga aggcgaacca gttcagcagg gtgacgagat aggcgtcggc
     2821 gacggtgaac ctgccgccga ccaggtactc ctcgctgccc agccgcttgg cgaggtagtc
     2881 gagcgtcggc tcgagcaacg cctttgccgc ctccttggtg ggctccgccg ccttgggatt
     2941 gaagacgttg gcgaagatgc gcttgtgcac ctcggtggac aggtagttca gcgtgtcgat
     3001 gagcaggtag cgctccagcg tgccccaagg cggcgccagg ccggtttcgg gcttgcgatc
     3061 ggccaggtac tgcaggaccg aggggccctc gttcaggacc tggccgtcgt cgagcctgag
     3121 cgccggcacg tagcccttgg ccgagatctt gtagtagtcg ccgccatcgt cggtcttctt
     3181 gttctcgacg aaccggaccc tgaccggcag gccggcctcc agggccgtga tgtgcgaggc
     3241 gagcgagcag gccatcggtg aagcgaagag ttccatcgca tcctccttgt ttttgtgcga
     3301 tacggtacag aaatacggat ggcgcactgc gtcaaggata attatgcgaa ccggtacaga
     3361 aataacgaaa cgttcacgcg gccgccctcg cggcttcatt accg
//
LOCUS       DASWGA010000220         7752 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2171295, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000220 DASWGA010000000
VERSION     DASWGA010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7752
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2171295"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1259
                     /locus_tag="VF991_05315"
     CDS             <1..1259
                     /locus_tag="VF991_05315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX9555892.1"
                     /translation="ELVQKTEIVYEEARTTRLGAQKFMVDGRHTGTGGGNHVTLGGPS
                     AADSPLLRRPDLLKSLLGYWLNHPSLSYLFSGLFIGPTSQHPRVDEARDDALHELEIA
                     FRQIAPGRQTPPWLVDRIFRNLLVDASGNAHRTEFCIDKLFTPDTAAGRRGLLELRAF
                     EMPPHWRMSVAQQALLRGLVAKFWDRPYERPLSRWGTRLHDDFMLPHFVWQDFTDVLA
                     DLGEAGYRFQPDWFAPHFEFRFPKIGEVAQRGIELELRHALEPWHVLGEEPGGGGTVR
                     YVDSSVERLQVKVEGLNPARHVIACNGLRLPLQATGTAGEYVAGVRYRAWQPANALHP
                     TIGVHAPLTFDIHDSWNGRSLGGCSYHVAHPGGLSYERMPVNANEAEARRRSRFFPIG
                     HSPGESAEPRPIDNPEHPLTLDLRRA"
     gene            1484..3973
                     /locus_tag="VF991_05320"
     CDS             1484..3973
                     /locus_tag="VF991_05320"
                     /inference="COORDINATES: protein motif:HMM:NF025761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEX9555893.1"
                     /translation="MRGLSSTPASAYDELVTGQKSIRYHWQGILSVIRALPGGLSERV
                     ESARRQLEESGATVNLLDDRGAPRWSFDPLPVVIAADEWAQLETGLTQRARLLDAILA
                     DLYGPQTLLTQHRLPPMLVHANRHFHRPCRVVDGIAPTRHLAHYAVDLVRLGNGRWHV
                     LADHTEVPSGIGYALEMRRVLARSLPEAFRSIPVRHLRPFVDRWHDSLLAMAPAGVAN
                     PNMAVLTPGSLSATYFEHVYLSRALGVPLVEGGDLVARDNQVSIKTLAGLRPVHMLLR
                     RLDSAFADPLELRADSALGVTGMVETTRSGRITLANALGSGVVETPAMMPFLERLSEH
                     LLGQPLALPSLDVWWLGEPSALSFALANLDLMIVRPCLGNDREPIVVGMLEVPERKAL
                     VERIRAQPGHFVAQYPITPSLSPKWDNAGLMPAAVVLRVFLSAEGDGYCVLPGGLARE
                     PMGDTCLRSLGRLNGTLKDVWVLAEDAADVQIPSTRRFHQLSVDRGSADLQSRVADNL
                     YWLGRYIERLDDDARLLRITAARVAQGAMGPRDAIEVRLLGRLLDQANLMDHGSALAS
                     PESAAFQQGLTAVASESRGLAQVLDAIQRLTITMRDRFSADMTTAAGPLMSEVRQELL
                     AARGNLDPLLAALDEIVRFVATMSGLAQENMTRGTGWRFLDLGRRLERAQYVVTVALD
                     PLLQSPIDWDAAMRLALELCDSTITYRTRYLGQLQPAPVLDLVVLDDSNPRSLMFQLR
                     AIDSHLDYLGRASGVHVPLLPSSLDDDLEAAVRQFAGDEKAWRHEGLALAMLRDVVAD
                     TEAKFEKLSEAITRAYFSHVPAAQTVGSSTA"
     gene            3991..4860
                     /locus_tag="VF991_05325"
     CDS             3991..4860
                     /locus_tag="VF991_05325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012386188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX9555894.1"
                     /translation="MLSHRTSYTYASSVDSAHHIAHLRAREFPGQKVSAIGVDISPAP
                     ALAVQHFDYFGNHIDIYRIDKPHTRFDIEVRAAVDVSLADPPPAASTPPWEEIRAALI
                     GDGFPLAVEASEFVHESPLLPEVEALQAYGAQSFTSGRPILAAARELTSRIKADFEYH
                     PGATDISTPLAEVFAGRAGVCQDFAHVEIAALRAHGLAARYVSGYLRTVHSKDEIALR
                     GADASHAWVAVWCGEAAGWVHLDPTNDLVAKEDHVAVAWGRDFSDVSPLRGVILGGES
                     HSYGVAVTLIPTA"
     gene            complement(4986..5843)
                     /locus_tag="VF991_05330"
     CDS             complement(4986..5843)
                     /locus_tag="VF991_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEX9555895.1"
                     /translation="MHWTDRRRRFRALLAGERCIHPGSVFDPISARIAEDLGFELGMF
                     AGSTASLTVLGAPDLIVLTLTEFAAQAYRINRAGNLPLLVDADHGYGNALNAKRTVEE
                     LETAGVCALSLEDTDLPTPFGTAKPRLTSIAEGVGKMKAALAGRQDPALCIAGRTSAV
                     SISGLDDAIARGKAYEQAGVDALFFVGVRTRAELDAISAATRVPLILGGGSPELADLS
                     YLGARRVKVALQGHQPFAAAVKAVHDTLKALRDGTPPGKLTGIADAELMKRVTRNADY
                     GRWMKEFLS"
     gene            5999..7375
                     /locus_tag="VF991_05335"
     CDS             5999..7375
                     /locus_tag="VF991_05335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9555896.1"
                     /translation="MFEVLDRQTSLTVNQKKILAAAIIGDALEFFDYFLIAFVLAFLI
                     GPWKLTFGQSAIVLLSSGIGAIIGAYAWGWLADRIGRRKVFIGTVLNFSIATGLLYFT
                     PDNGWIFLTVMRFFVGLGVGGLYCVDLPLVQEFMPSSKRGWVGGLVTCIIPIGVGLGS
                     VLGAFMGADQWRLLFAIGVLPAALVLLVRLWVPESPRWLVRQGRYDDARKSLGWALQI
                     DPNTLPLPKPGEVAPPVKTNWLELFKYPRSLLVSWLGNAGAQTAVYGVALWAPSLFVL
                     LLKVTPQEASKMMILLTVVGFVGRLAFSYFSERIGRRNSGGLLGFGAGLLIILAGYNY
                     DGVLFGVSAFWLILAAAMFFADGGFAIVGPYAAEVWPSHLRTSGMGSAYGFGGIGKII
                     GPLGLALIVGSSNYLKPDVPLPQIPTAFLYLGCWFLMAGVVYYFFGLETKGKSIEQID
                     KELGVATA"
     gene            7466..>7752
                     /locus_tag="VF991_05340"
     CDS             7466..>7752
                     /locus_tag="VF991_05340"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9555897.1"
                     /translation="MISRAEALRPIVEATSDEIEEKRRLPPALLDKLHEARLFRLLLP
                     RSSNGIETDPITFFHVIETIARADASTAWCLSQAGGCAMSAAYLDLPVAKA"
BASE COUNT         1140 a         2764 c         2507 g         1341 t
ORIGIN      
        1 ccgagctcgt gcaaaagacc gagatcgtct acgaggaggc gcgtacgacc cggctgggcg
       61 cgcagaagtt catggtcgac gggcgccata ctggcaccgg cggcggcaac cacgtgaccc
      121 tgggcggacc ctcggctgcc gactcaccgt tgctgcgccg gcccgacctg ctcaaaagcc
      181 ttttgggcta ctggctcaac catccgtcgc tctcctacct gttctccggc ctgttcatcg
      241 gcccgaccag tcagcacccc agggtcgacg aggcgcgcga tgacgcgttg cacgagctcg
      301 agatcgcctt tcgccagatc gcgcccggcc ggcagacccc gccctggctg gtcgaccgca
      361 tcttccgcaa cctgctggtc gatgcgagcg gcaacgcgca ccgcaccgag ttctgcatcg
      421 acaagctgtt cacgcccgat acggccgccg gacggcgcgg tcttttggag ctgcgcgctt
      481 tcgagatgcc gccgcattgg cgcatgagcg tggcccagca ggcgctgttg cgcggcctgg
      541 tcgccaaatt ctgggaccgg ccttacgagc gcccgctcag ccgctggggc acgcgcctgc
      601 acgacgattt catgctgccg cacttcgtgt ggcaggactt caccgacgtg ctggccgatc
      661 tcggtgaggc gggttatcgc ttccagcccg actggttcgc gccgcatttc gagttccgct
      721 tccccaagat cggcgaggtg gcccaacgcg gcatcgagct cgagctgcgc cacgcgctgg
      781 aaccgtggca tgtgctgggc gaggagccgg gcggcggcgg cacggtgcgc tacgtcgatt
      841 cctcggtcga gcgtctgcag gtcaaggtcg agggcctgaa ccctgcccgc cacgtcatcg
      901 cctgcaacgg cttgcgcctg ccgttgcagg cgacgggcac cgccggcgag tacgtggccg
      961 gcgtacgcta ccgggcttgg cagccggcca atgcgctcca cccgaccatc ggcgtgcacg
     1021 cgccgctcac cttcgacatc cacgacagct ggaacggccg ctcgctgggc ggctgcagct
     1081 atcacgtcgc ccatcccggc ggcctcagct acgagcgcat gccggtcaac gccaacgagg
     1141 ccgaggcccg ccgccgctcc cgcttcttcc cgatcggcca ttcgccgggc gagagcgccg
     1201 agccgcgacc gatcgacaac cccgagcatc cgctgaccct ggatctcagg cgggcgtagc
     1261 tgccgcacca cgaccgtcat gctcctccca tcccctactc ttcgtcatgc tcctctcccc
     1321 cgctaggggg agaggttggg tgagggggtc acgcacgggc cttcgaagcc ccctcaccta
     1381 gcctctcccc ctagcggggg agaggaacag gccgtagacc ccgccctttc cccatgcgag
     1441 tctagcgcct cctattcctt cttcctgcgg gcccatggag tcgttgcgcg gcctctcttc
     1501 tacgccggca agcgcctacg acgaactggt caccggccag aagtcgatcc gctatcactg
     1561 gcaaggcatt ttaagcgtca tccgcgcgct gcccgggggc ttgagcgagc gggtggaaag
     1621 cgcgcgccgg cagctcgagg aatcgggcgc gacggtcaac ctgctggacg atcgcggcgc
     1681 gccgcgctgg agcttcgacc cgctgccggt ggtgatcgcg gccgacgaat gggcgcaact
     1741 cgagaccggc cttacccagc gcgcccgcct gctcgacgcc atcctggccg acctctacgg
     1801 cccgcagacg ctgctcaccc aacaccgcct gccgccgatg ctggtccatg ccaaccggca
     1861 cttccaccgg ccgtgccggg tcgtcgacgg catcgcaccg acccgccacc tcgctcacta
     1921 tgccgtcgac ctggtgcgcc tgggcaacgg gcgctggcac gtgctggccg accacacgga
     1981 agtgccgtcg ggcatcggct atgcgctgga gatgcgccgc gtgctggcca ggagcctgcc
     2041 cgaggcgttc cgctccattc cggtgcgcca tcttaggcct ttcgtcgacc gctggcacga
     2101 ttcgctgctc gccatggcgc cggccggcgt ggccaatccc aacatggcgg tgctgacgcc
     2161 gggctcgctg tcggcgacct atttcgagca tgtctacctg tcgcgcgcgc tcggcgtgcc
     2221 gctggtcgag ggcggcgacc tcgtcgcccg cgacaatcag gtgtcgatca agacgctggc
     2281 cggactgcgc cccgtccaca tgctgctgcg ccgcctcgac agcgccttcg ccgatcccct
     2341 ggaactgcgc gccgattccg cgctcggcgt caccggcatg gtcgagacca cgcgcagcgg
     2401 gcgcattacg ctggccaacg cgctgggctc gggcgtggtc gagacgccgg ccatgatgcc
     2461 gttcctcgag cggctgagcg aacacctgct tggccagccg ttggcattgc cgtcgctcga
     2521 cgtgtggtgg ctgggcgaac cgtcggcgct ctccttcgcg ctcgccaatc tcgacctgat
     2581 gatcgtgcgg ccctgcctcg gcaacgaccg cgagcccatc gtggtcggca tgctggaagt
     2641 ccccgagcgc aaggccctcg tcgaacgcat ccgcgcccag cccggtcact tcgtggcgca
     2701 gtatcccatc acgccctcgc tcagccccaa atgggacaac gcgggcctga tgccggcggc
     2761 ggttgtgtta cgcgtgttcc tgagcgcgga gggagacggc tattgcgtgc tgccgggcgg
     2821 cctggcgcgc gagccgatgg gcgacacctg cctgcgttcg ctcggccggc tgaacggcac
     2881 gctgaaggac gtctgggtcc tggccgaaga cgcggccgac gtgcagatcc cgtcgacccg
     2941 ccgcttccac cagctttccg tcgaccgcgg cagcgccgat ctgcagagcc gcgtcgccga
     3001 caacctgtac tggctcggcc gctacatcga gcgtctggac gacgatgcgc ggctgctgcg
     3061 tatcaccgcg gccagggtcg cccaaggcgc catgggcccg cgcgacgcga tcgaggtgcg
     3121 cctgctcggc cgcctgctcg accaggccaa cctgatggac catggttcgg cgctggcctc
     3181 gccggaaagc gcggcgttcc agcaggggct aaccgccgtc gcctccgaaa gtcgcgggct
     3241 ggcccaggtg ctcgatgcca tccagcgcct gaccatcacc atgcgcgatc gcttttccgc
     3301 cgacatgacg acggccgccg gcccactgat gtcggaggtc cggcaggaac tgctggcggc
     3361 gcgcggcaat ctcgatccgc tgctggcggc cctcgacgag atcgtgcgct tcgtcgccac
     3421 catgtcgggc ctcgcccagg aaaacatgac gcgcggcacg ggctggcgct ttctcgacct
     3481 cggacggcgc ctcgaacgcg cgcagtatgt ggtgaccgtg gcgcttgacc ctttgctgca
     3541 atcgccgatc gattgggacg ccgccatgcg gctcgctctc gagctctgcg acagcacgat
     3601 cacctaccgc acccgctatc tcggccaact tcagccagcg ccggtgctcg acctcgtcgt
     3661 tctcgacgac agcaatccgc gctcgctgat gttccagctt cgcgccatcg acagccatct
     3721 cgactatctc gggcgcgcct cgggcgtcca cgtgccgctc ctgccgtcgt cgctcgacga
     3781 cgatctcgag gccgccgtgc gtcagttcgc cggcgacgaa aaggcctggc gccatgaagg
     3841 gctggcgctg gccatgctgc gcgacgtggt ggccgacacc gaggccaagt tcgagaagct
     3901 ctccgaggcg atcacccgcg cctacttctc gcacgtgccg gcagcccaga ccgtcggctc
     3961 ttcgaccgcg tgaggctggc cgtgaagtac atgctctcgc accgcacctc ctacacctac
     4021 gccagcagcg tcgattccgc ccaccacatc gcgcatttgc gtgcgcgcga gtttcccggc
     4081 cagaaggtca gcgcgattgg cgtcgacatc agcccggcgc cggcgctggc ggtgcagcat
     4141 ttcgactatt tcggcaacca catcgacatc tatcgcatcg acaagccgca tacccgcttc
     4201 gacatcgagg tgcgcgccgc cgtcgacgta agcctggccg acccgccgcc cgccgcctcg
     4261 acgccgccct gggaggagat tcgcgcggcc ctgatcggcg atggctttcc tctggcggtc
     4321 gaggccagcg agttcgtgca cgaatcgccc ctgctgcccg aggtcgaggc cttgcaggcc
     4381 tatggcgccc agtcgttcac gtcaggccgg ccgatcctcg ccgcggcgcg cgagctcaca
     4441 tcgcgcatca aggctgattt cgaataccat cccggcgcca ccgacatcag cacgccgctc
     4501 gccgaagtct tcgccggcag ggcgggcgtc tgccaggatt tcgcccacgt cgagatcgcg
     4561 gcgctacgcg ctcatggcct ggccgcccgc tatgtctcgg gctacctccg caccgtgcac
     4621 tccaaggacg agattgcgct acgcggcgcc gatgcgagtc acgcctgggt ggcggtgtgg
     4681 tgcggcgagg ccgccggctg ggtccatctc gatccgacca acgatctggt ggccaaggaa
     4741 gatcacgtcg ccgtcgcctg gggccgcgac ttctccgacg tgagcccatt gaggggcgtg
     4801 atcctgggcg gcgagtccca ctcctacggc gtcgccgtga cgctgatacc gacagcgtag
     4861 cactgcctag cttcatgctc ctctcccccg cttgggggag aggacgggtg agggggctac
     4921 gcacgtcgct gccccctcac ctaacctctc ccccctagcg ggggagagga acctgagtgg
     4981 aagaactaag acaaaaactc cttcatccag cggccatagt cggcgttgcg cgtcacgcgt
     5041 ttcatcagct cggcatcggc gatgcctgta agcttgccag gcggcgtgcc gtccctcagg
     5101 gccttcagcg tgtcgtgcac ggccttgacc gcggcggcga acggctgatg accctgcagc
     5161 gccaccttca cccgccgcgc gccgagatag gaaaggtcgg cgagctcggg cgatcctccg
     5221 cccaggatca gcggcaccct ggtcgcggcc gagatggcat cgagctcggc gcgcgtgcgg
     5281 acgccgacga agaacagcgc atcgacgccc gcctgctcgt aggccttgcc gcgggcgatc
     5341 gcgtcgtcga gcccgctgat cgagacggcg ctggtgcggc cggcaatgca cagcgccggg
     5401 tcctgacggc cggcaagggc ggctttcatc ttgccgactc cttcggcgat cgaggtgagc
     5461 cgcggcttgg ccgtgccgaa gggcgtcggc aggtcggtgt cctccaggct caaggcgcag
     5521 acgcccgccg tctccagctc ctcgacggtg cgcttggcat tgagcgcatt gccgtagccg
     5581 tggtcggcgt cgaccagcag cggcaggttg ccagcgcggt tgatgcgata ggcctgggcc
     5641 gcgaactccg tcagggtcag cacgatcagg tcgggcgcgc cgagcacggt gagcgaggcc
     5701 gtcgagcccg cgaacatgcc gagctcgaag ccgagatcct cggcgatgcg ggcggagatc
     5761 ggatcgaaca ccgaaccggg atggatgcag cgctccccgg cgaggagcgc gcgaaagcgc
     5821 cggcggcgat cggtccaatg catgtcggtc tccccttatc ggccccgccg tttcgacgag
     5881 caaacgtcgc cggcgcgggg gcttgccgct gcggcgtgtc aaagcgtagc gttcctagca
     5941 ctggcggaac gacggcgcga cgtccgccat agcaagaaca ggcgccgggg gaaacgccat
     6001 gttcgaggtt ctcgatcgac agacgagtct caccgtcaac cagaagaaga tcctcgccgc
     6061 agcgatcatc ggtgacgcgc tggaattctt cgactatttc ctgatcgcct tcgtgctcgc
     6121 gttcctgatc gggccgtgga aactcacctt cggccagtcg gccatcgtgc tgctctcctc
     6181 cggtatcggc gccatcatcg gcgcctatgc ctggggctgg ctcgccgacc gcatcggccg
     6241 gcgcaaggtg ttcatcggca cggtgctgaa cttctcgatc gccaccggcc tgctctattt
     6301 cacgccggac aatggctgga tcttcctgac ggtcatgcgc ttcttcgtcg ggctcggtgt
     6361 cggcggcctg tactgcgtgg acctgccgct ggtgcaggag ttcatgccct cgtccaagcg
     6421 cggttgggtc ggcggcctcg tcacctgcat catcccgatc ggcgtcggtc tcggttcggt
     6481 gctcggcgcc ttcatgggag cggaccaatg gcggctgctg ttcgccatcg gcgtgctgcc
     6541 ggcggcactg gtcttgctgg tgcgcctgtg ggtgccggaa tcgccgcgct ggctggtccg
     6601 ccagggtcgc tacgacgacg cccgcaaatc gctcggctgg gcgctgcaga tcgaccccaa
     6661 cacgctgccg ctgcccaagc ccggtgaggt cgcgccgccg gtgaagacca actggctcga
     6721 gctgttcaag tatccgcgca gcctgctggt ctcgtggctc ggcaatgccg gcgcccagac
     6781 cgcagtctat ggcgtcgcgc tgtgggcgcc ctcgctgttc gtcctgctgc tcaaggtgac
     6841 gccgcaggaa gcctccaaga tgatgatcct gctgaccgtg gtcggcttcg tcggccgcct
     6901 cgcgttttcg tatttctcgg agaggatcgg ccggcgcaat tcgggcggcc tgctgggctt
     6961 cggcgccgga cttctcatca tcctggccgg ctacaactac gacggcgtcc tgttcggcgt
     7021 ctcggccttc tggctgatcc tggcggcggc catgttcttc gccgacggcg gcttcgccat
     7081 cgtcggtccc tatgcggccg aggtctggcc ctcccacctg cgcacgtcag gcatgggatc
     7141 ggcttacggg ttcggcggaa tcggcaagat catcggcccg ctggggctcg ctttgatcgt
     7201 cggctccagc aattacctga aacccgacgt gccattgccg cagattccga cggctttcct
     7261 ctatctcggc tgctggttcc tgatggccgg ggtggtctat tatttcttcg ggctggagac
     7321 caagggcaag tcgatcgagc agatcgacaa ggagctcggc gtcgcaaccg cctgaggggc
     7381 aaacagttcg gagtgaatgg tcttggacac gttgatcccg tcttccgccg atcttgcttc
     7441 tgccgacttg gccggcgacc ccgccgtgat ctctcgcgcc gaagcgctca ggcccatcgt
     7501 cgaggcgaca tccgacgaaa tcgaagaaaa gcgccgattg ccgccggcgc ttctggacaa
     7561 gctccacgag gcgcggctgt tccgcttgct gctgccgcgc tcgtcgaacg gcatcgagac
     7621 cgatcccatc accttcttcc acgtcatcga gaccatcgcg cgcgccgacg ccagcaccgc
     7681 ctggtgcctg agccaggccg gcggctgcgc catgtcggcc gcctatctcg acctgccggt
     7741 cgccaaggcg at
//
LOCUS       DASWGA010000221         1656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_652827, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000221 DASWGA010000000
VERSION     DASWGA010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_652827"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..1008
                     /locus_tag="VF991_05345"
     CDS             46..1008
                     /locus_tag="VF991_05345"
                     /inference="COORDINATES: protein motif:HMM:NF006045.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEX9555898.1"
                     /translation="MPDTPPASTAPHEKYERLIAAAQRHPAMSTAVAHPCDAVSLESV
                     AEAARMGLLKPILVGPAARIREVASRASIDIGSFELVTALHSHNSAAKAVELVRGGRA
                     EALMKGSLHTDELMGAVVARDTGIRTARRISHCFVMDVPNHAQAMIISDAAVNIAPTL
                     ETKVDIVQNAIDLAHALGVPEPRVAILSAMETVNPKVPSTIEAAALCKMADRGQITGG
                     VLDGPLALDNAINLAAAEIKHIISPVAGRADILIVPDLEAGNMLAKSLSFLAGADAAG
                     IVLGARVPVILTSRADSLLTRLASCAVAALGAAARRANAAAAVA"
     gene            1017..>1656
                     /gene="fabI"
                     /locus_tag="VF991_05350"
     CDS             1017..>1656
                     /gene="fabI"
                     /locus_tag="VF991_05350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEX9555899.1"
                     /translation="MNDAIRPVLTGRKALVVGIANDQSIAWGCAKAFRTAGAELAVTW
                     LNDKARPHVEPLARELEAPITAPLDVSVPGQLEAVFAEIGQRWGKLDILVHSIAFAPR
                     ADLQGGLLNSSAEGFARAMDISCHSFIRMARLAAPLMTDGGTMFAMSYYGANRVVPNY
                     NLMGPVKAALEASCRYLAYELGPRRIRVHAISPGPLKTRAASGLKDFELLLNE"
BASE COUNT          277 a          584 c          527 g          268 t
ORIGIN      
        1 tgttcaacga gtcgcgcgga tcccttcccg caaccggggc cacccatgcc tgatacgccc
       61 ccagcgtcga cggccccgca tgagaagtat gaacggttga ttgccgccgc gcagcgccat
      121 ccggcgatgt ccaccgccgt ggctcatccc tgcgacgcgg tctcgctgga gagcgtcgcg
      181 gaggccgcaa gaatgggact gctgaagccc atcctggttg gcccggcggc gcgcattcgc
      241 gaggtggcga gccgcgcctc aatcgatatt ggctccttcg aactggtcac cgcccttcac
      301 agccacaatt cggcggccaa ggcagtcgag cttgtgcgcg gaggccgcgc cgaggcgctg
      361 atgaagggaa gcctgcacac tgacgagctg atgggcgccg tcgtggcgcg cgacaccggt
      421 atccgcacgg cccggcgcat cagccactgc ttcgtcatgg atgtaccgaa ccatgcccag
      481 gcgatgatca tcagcgacgc tgccgtgaac atcgcaccta cccttgagac caaggtcgac
      541 atcgtccaga acgccattga tcttgcccat gccctcgggg tgcccgagcc gcgcgtcgcg
      601 atcctgagcg cgatggagac tgtcaatccc aaggtgccgt ccacgatcga agccgccgcc
      661 ctctgcaaga tggcggaccg cggccagatc actggcggcg tacttgatgg tccgctcgcc
      721 ctcgacaacg ccatcaacct cgcggccgcc gagatcaagc acatcatctc gccggtcgcc
      781 ggccgagccg acatcctgat cgtaccggat ctcgaggctg gcaacatgct ggccaagagc
      841 ctgtcgttcc tggccggcgc ggatgcggcc ggcatcgtgc ttggagcacg cgtgccggtt
      901 atcctgacga gccgcgccga ttcgctgctg acccggctcg cttcgtgcgc cgtcgccgca
      961 ctgggggcgg cggcgcggcg ggccaacgcc gccgccgccg tggcctgagg agtgacatga
     1021 acgatgccat cagaccggtc ctgacgggcc gcaaggcgct ggtcgtcggg atcgccaacg
     1081 accagtcgat cgcctggggc tgcgccaagg cattccgtac cgctggggcc gagctcgccg
     1141 tgacttggct gaacgacaag gcaaggccgc atgtcgaacc gctggcccgc gaactggagg
     1201 cgccgatcac cgctccgctc gacgtctccg tacccggcca actcgaggcc gtgttcgcgg
     1261 agatcggcca gcgctggggc aagctcgaca tccttgtcca ttcgattgcc ttcgccccca
     1321 gggccgattt gcagggcggc ctgctgaact cctcagcgga gggcttcgcc agggcgatgg
     1381 acatctcctg ccattccttc atccgcatgg cgcgcctggc agcaccattg atgaccgacg
     1441 gcggcaccat gttcgccatg agctactacg gcgccaaccg cgtcgtgccg aactacaacc
     1501 tcatggggcc ggtcaaggcc gcactcgagg cctcctgccg ctacctcgcc tacgagctgg
     1561 ggccacggcg catccgggta cacgcgatct cgccgggccc actcaagacg cgggccgcgt
     1621 cgggtctgaa agacttcgag cttttgctga acgagg
//
LOCUS       DASWGA010000222         1637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1417015, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000222 DASWGA010000000
VERSION     DASWGA010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1417015"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..540)
                     /locus_tag="VF991_05355"
     CDS             complement(64..540)
                     /locus_tag="VF991_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003518638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9555900.1"
                     /translation="MDIAFTLNGERRQVGAPETASLLDVLRNHLGLMGTRYGCGLEQC
                     GCCMVLVDGEPVYACTREVGTLAGRTVTTIEGLGTPAKPHPLQQAFLDEQAGQCGYCL
                     SGILMSAKALLDRNPHPSRAEVAAALDKHLCRCGSHQRILRAVERAAAALDGRRPA"
     gene            603..1562
                     /locus_tag="VF991_05360"
     CDS             603..1562
                     /locus_tag="VF991_05360"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEX9555901.1"
                     /translation="MTNRAHVLLWTDQSAAYLNAIKAAGLSDRVAVDTLSRKEKPSAD
                     QLARTEALMAGAVPAGLLPKMPKLRWAQAMSAGVEGWLALPDLPAGLTLTCARGTHTE
                     SMPENIVGALFHVAKPYSTAVENQKSVKWVHTVAQPLTGKTLGILGLGAIGQEVARIV
                     TALGMRVIGTRRRPAPMANVAEVLPPDRTDEVLSRSDFVLLLLPATPDTDNLIDAKRL
                     AKMKPTAWLLNFGRGHLIKDDDLIAAVKAKTIAGALLDVFRQEPLPAEHPFWRTEGII
                     VLPHIGGPHPERDRFVARLFVDNLGRFLDGVPLKEVVDRAAGY"
BASE COUNT          265 a          570 c          550 g          252 t
ORIGIN      
        1 ggaagcggat ccagcggtcg aggcgcggat tctcgaccag gctggtcggc agggcgggcg
       61 cgctcatgcc ggcctcctgc cgtccagtgc ggcagccgcg cgttccaccg cgcgcaggat
      121 gcgctggtgg gagccgcagc ggcagagatg cttgtcgagc gcggcggcga cctcggcgcg
      181 gctgggatgg ggattgcgat cgagcaacgc cttcgccgac atcaggatgc cggacaggca
      241 atagccgcac tggccagcct gctcatcgag gaaagcctgc tgcaagggat ggggttttgc
      301 cggcgtgccc agcccctcga tggtggtcac cgtccggccg gccagcgtgc cgacctcccg
      361 ggtgcaggca tagacgggtt caccatcgac cagcaccatg cagcagccgc actgctccag
      421 gccgcagccg tagcgcgtgc ccatcaggcc gaggtggttg cgcagcacat cgagcagcga
      481 tgcggtctcc ggcgcgccga cctggcggcg ctcgccgttt agggtgaagg caatgtccat
      541 gacagtctcc aatttgccca gcctatccgc tacggtgcgc ctgaaacacc ctggagttga
      601 ccgtgaccaa ccgcgcccat gtcctgctgt ggaccgacca gtcggccgcc tatctcaacg
      661 ccatcaaggc ggccggcctt tcggaccgcg tcgccgtcga taccctgtcg cgcaaggaga
      721 agccgtcggc cgaccagctg gcgcgcaccg aggcgctgat ggcaggcgcc gtgccggcgg
      781 gcctgctgcc caagatgccc aagctgcgct gggcgcaggc gatgagcgcc ggcgtcgagg
      841 gctggctggc gctgcccgac ctgccggccg gcctcacgct cacctgcgcg cgcggcacgc
      901 acaccgaatc gatgccggag aacatcgtcg gtgcactgtt ccatgtcgcc aagccctaca
      961 gcacagcggt cgagaaccag aagagtgtca aatgggtcca caccgtcgcc cagccgctga
     1021 ccggcaagac gctgggcatc ctggggctgg gcgccatcgg ccaggaagtc gcccgcatcg
     1081 ttactgcgct cggcatgcgc gtgatcggca cgcgccggcg gccggcgccg atggccaacg
     1141 tcgccgaagt cctgccgccc gatcggaccg acgaggtgct gagccggtcc gacttcgtgc
     1201 tgctgttgct gccggccaca cccgacaccg acaatctcat cgacgccaag cgcctggcca
     1261 agatgaagcc cacggcttgg ctgctgaatt tcggccgcgg gcatctgatc aaggacgacg
     1321 acctgatcgc cgccgtgaag gccaagacga tcgccggcgc cctcctcgac gtcttccgcc
     1381 aggagccgct gccggccgag catccgttct ggaggaccga gggcatcatc gtgctgcccc
     1441 atatcggcgg cccgcatccc gagcgcgacc gcttcgtcgc ccgcctgttc gttgacaatc
     1501 tcggccgctt cctcgatggc gtgccgctga aagaggtggt cgaccgcgcg gcggggtatt
     1561 gatcgaccga tgtcatcctg agcgtagcga aggatctcat gccgattgca agcggcgatg
     1621 aggtccttcg ctgcgct
//
LOCUS       DASWGA010000223         5232 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_532671, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000223 DASWGA010000000
VERSION     DASWGA010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5232
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_532671"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..894)
                     /gene="uvrC"
                     /locus_tag="VF991_05365"
     CDS             complement(<1..894)
                     /gene="uvrC"
                     /locus_tag="VF991_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEX9555902.1"
                     /translation="MSDQTDIDQKPSEGSLAEGSLADGMRIIGEFVHTLPRKPGVYRM
                     IAGDGEVLYVGKARSLRSRVAAYTQPTRLDTRLVRMVSGTRTMEFSVTGSEAEALLLE
                     NNLIKRFKPRFNVLLRDDKSFPYIVIRRDTEWPQLAKHRGTREPANEYFGPFASATAV
                     NRTLYALQRAFPLRSCSDGVFSTRTRPCLQYQIKRCTAPCVGRIDKAEYGTIVDEVRG
                     FLGGRNREVQQALSQRMEQASSGLEFERAAVLRDRIRALAHIQSHQAISLPSIDEADI
                     FAAHGEGGQVCVEVFFLRAGQN"
     gene            complement(1200..2072)
                     /locus_tag="VF991_05370"
     CDS             complement(1200..2072)
                     /locus_tag="VF991_05370"
                     /inference="COORDINATES: protein motif:HMM:NF014605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEX9555903.1"
                     /translation="MDHRRISHRVPSKLHLQSCRRSPTPPLAGAFLLFGDRPPLSCPR
                     PRSMHMAKRAARRAKLHAIDSARIHSLVFDHTPANDRDQSYVRKIRPRSDNQRMLMEA
                     IEAKPLTVALGPAGTGKTYLAISAAVEALDAGTVSRIVLSRPAVEAGENLGFLPGDMR
                     EKLDPYLRPLWDALNDRLGAKRLRQHLDDGTIEIAPVAFMRGRTLNNSFVLIDEAQNC
                     TYGQLKMLLTRLGWHSTMVMTGDPDQTDLLPELSGLDTIGRKLEALEDVAVVRLTDKD
                     VVRHPLVGRMLSVL"
     gene            complement(2229..3590)
                     /gene="guaD"
                     /locus_tag="VF991_05375"
     CDS             complement(2229..3590)
                     /gene="guaD"
                     /locus_tag="VF991_05375"
                     /EC_number="3.5.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003605269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008892 - guanine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006147 - guanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanine deaminase"
                     /protein_id="HEX9555904.1"
                     /translation="MTGRAASPRLTAVRGPVLTFRGDPFRDGLATTMVHEPDAIVAMQ
                     DGLIRHFGPADRVSRELPAGVEIRDWGRDALISAGFIDSHVHYPQTPMIGANGARLLD
                     WLNKYTFPTELKYADHDFARGVARVFLQESLRNGITTSCVYCTVHPQSVDALFEEAER
                     LGLRLAAGKVLMDRNAPAALCDTAQSGYDQSRALIAKWHGRGRLLYAITPRFAGTSSS
                     EQLAAAGALWREHRDCLMQTHIAETPEEVAWVKDLFPDRRNYLDVYDHHGLCGERAVF
                     GHGIWLDEAELQRLHVCGAAIAHCPTSNFFLGSGALDFSRILKKERPVRLGLGTDIGA
                     GTSFSILATLGAAYQAAQLNRQTLSAGHAYYLATRGAARALYLDDRVGSIAPGMEADL
                     VVLDMRSTPLIDFRMNQARDFAEQLFIQMTLGDDRAVQATYTAGHLVYSRAEGNKQAP
                     LRG"
     gene            complement(3587..4588)
                     /locus_tag="VF991_05380"
     CDS             complement(3587..4588)
                     /locus_tag="VF991_05380"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX9555905.1"
                     /translation="MARLNGLTGRALGVVTMIAIVALALWLTPSRQRSSAQDRDQANN
                     QPLIARGYTDAANGTVVIAGDPLGGQTVIELRIKEGQTVKRDQIIAVLSNYPRADITV
                     RMAEANLQKLKQERETMLTGARVTRIAMQEATVRTTIDLNKLKDLERLRSARPADQKE
                     LEVSIAERNLANQKATLELQKQALKNDLAANQIDIDNSQATLETARADRDASLVRSPV
                     DGLVAEIYTRQGELIPGHPGIAKIVDMRQLRVLAEVDELHLPRLVPGGRVEITFRGNS
                     RVYGGKIVRAPMTVTRVKRSKADLGQGSAHLVEAEIEFDDPSTIPQMLEREARVTFL"
     gene            complement(4723..4798)
                     /locus_tag="VF991_05385"
     tRNA            complement(4723..4798)
                     /locus_tag="VF991_05385"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4763..4765),aa:Ala,seq:ggc)
     gene            complement(4871..>5232)
                     /locus_tag="VF991_05390"
     CDS             complement(4871..>5232)
                     /locus_tag="VF991_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR02300 family protein"
                     /protein_id="HEX9555906.1"
                     /translation="SWGTKRTCQSCGARFYDLNKGPIKCPKCGREHDREDFVKVRRGR
                     GSAAAATAAAATAAAAAAAAKLAAKKKSDEAALAGDELPDVEGDEALADADDLADEAE
                     DIEVEVEVEDDKGESDR"
BASE COUNT          849 a         1658 c         1786 g          939 t
ORIGIN      
        1 attctggccg gcgcgcagga agaacacttc tacgcagacc tgcccgccct cgccatgggc
       61 ggcgaagatg tcggcctcgt cgatcgaggg caggctgatc gcctgatgcg actggatatg
      121 agccagcgcg cggatgcggt cgcgcagcac cgccgcgcgc tcgaactcga ggccggacga
      181 ggcctgctcc atgcgctgcg acagcgcctg ctggacctcg cggttgcgcc cgcccaggaa
      241 gccgcgcact tcgtcgacga tggtgccgta ctcggccttg tcgatgcggc ccacgcaggg
      301 cgccgtgcag cgcttgatct ggtactgcag gcaaggccgg gtgcgggtcg agaacacgcc
      361 gtccgagcag gagcgcagcg ggaaggcgcg ctgcagggca tagagcgtgc gattgaccgc
      421 ggtggccgag gcgaaagggc cgaaatattc attcgccggc tcgcgcgtgc cgcggtgctt
      481 ggcgagctgc ggccattcgg tgtcacggcg gatgacgata tagggaaacg acttgtcgtc
      541 gcgcagcaac acgttgaaac gcggcttgaa gcgcttgatc aggttgtttt cgagcagcag
      601 ggcctcggcc tcgctgccgg tgaccgaaaa ctccatggtc cgcgtgcccg acaccatgcg
      661 caccagccgc gtgtcgagcc gggtcggctg ggtgtaggcc gcgacccggc tccgcagcga
      721 acgcgccttg ccgacataga ggacctcgcc gtcgcccgcg atcatgcggt agacgccggg
      781 cttgcgcggc agggtatgca cgaactcgcc gatgatccgc atgccgtcgg ccagggaacc
      841 ctcggcaagc gagccctcgc tcggtttctg gtcgatgtcg gtttggtcgc tcacagggtc
      901 cctcgaaggg cgcgcacaat ggcgacgccg gcgcgtgcgg acaagacgac gggcccgaat
      961 ccgggcctgt gtggggaagt ctgtgaacaa gcccgcggtc aggtcaccgt agcgtcagcg
     1021 tcactgtatt gactcaatgt aggcacggtg gcaggcgatc gccactttag ctctaagcaa
     1081 ttgaaataga ttgcttactt atgctgggga tggccgatac aaagggctgg aagcggcaag
     1141 cgttctcgat ttggtctgtt cgtctgccgc gttccgatgt gtgggtaagt tcagtcgctt
     1201 cacagcaccg acagcatgcg gccgaccagc ggatggcgga ccacgtcctt gtcggtcagg
     1261 cgcaccacgg cgacgtcctc gagcgcttcc agcttgcgac cgatggtgtc caggccggac
     1321 agctcgggca gcaggtcggt ctggtcggga tcgccggtca tgaccatggt cgaatgccag
     1381 cccagccggg tcagcagcat cttgagctgg ccgtaggtgc agttctgcgc ctcgtcgatc
     1441 agcacgaagc tgttgttcaa ggtgcggccg cgcatgaaag ccaccggggc gatctcgatc
     1501 gtgccgtcgt cgagatgctg gcgcaggcgc ttggcgccca gccggtcgtt cagcgcgtcc
     1561 cacaggggac gcagataggg gtcgagcttt tcgcgcatat cgccgggcag gaagcccagg
     1621 ttctcgccgg cctcgacggc gggccgcgac agcacgatgc gcgagacggt gcccgcgtcg
     1681 agcgcctcga cggcggcgga aatcgccagg taggtcttgc cggtgccggc cggccccagc
     1741 gccaccgtca gcggtttggc ttctatggcc tccatcagca tgcgttgatt gtcgctcctc
     1801 ggtcggatct ttcggacgta gctctgatcg cggtcgttcg ccggagtatg atcgaagacg
     1861 agactgtgaa tacgggcgct atcgatggcg tgcagcttgg cgcggcgggc ggcgcgtttg
     1921 gccatatgca tactccgggg tcttgggcag gagagcgggg gccggtcgcc aaaaagcaaa
     1981 aacgcccccg caagcggagg cgtcggcgat cggcggcagg actgaaggtg caacttggag
     2041 ggcactcggt gggaaatccg ccggtgatcc atgttccgtc ggggcgcaat gtcctcggcc
     2101 ggataagcaa cctccttcag ctaccgggag aaagcgtacc ctgattgggg caggccggcc
     2161 accatattgt ggggcgccat ccaaatttaa cactagaggc agcgcggatg gtcctctcgg
     2221 aatcccgttt accccctcaa tggtgcctgc ttattcccct ctgcccggct gtagaccaag
     2281 tggccggcag tgtaggtggc ctgcacggcg cggtcgtcgc ccagggtcat ctggatgaaa
     2341 agctgctcgg cgaagtccct ggcctggttc atgcggaaat cgatcagggg cgtggagcgc
     2401 atgtcgagca ccaccagatc ggcctccatg cccggcgcga tgctgcccac acggtcgtcg
     2461 agatagaggg cgcgggccgc gccgcgggtg gcaagatagt aggcgtggcc ggccgacagg
     2521 gtctggcggt tgagctgggc ggcttggtag gccgcgccca gcgtggccag gatcgagaac
     2581 gacgtgccgg cgccgatgtc ggtgccgagg cccagccgca ccggcctttc tttcttcaag
     2641 atacgggaaa aatcgagggc gccgctgccg aggaagaagt tcgaggtcgg gcaatgggcg
     2701 atcgccgcgc cgcacacatg caggcgctgc agctcggcct cgtcgagcca gatgccgtgg
     2761 ccgaacaccg cgcgttcgcc gcacagcccg tgatgatcgt agacgtcgag gtaatttcgg
     2821 cgatcgggga acaggtcctt gacccaggcg acctcctcag gggtctcggc gatatgggtc
     2881 tgcatcaggc agtcgcgatg ctcgcgccac agcgcgccgg cggccgcgag ctgctcggac
     2941 gagctggtgc cggcgaagcg cggcgtgatg gcgtagagca ggcggcctcg gccgtgccac
     3001 ttggcgatca gcgcgcggga ctggtcgtaa cccgactggg cggtgtcgca gagcgccgcc
     3061 ggcgcgttgc gatccatcag caccttgccg gcagccagcc tgaggccgag cctttccgcc
     3121 tcctcgaaca gggcgtcgac cgactgggga tggacggtgc agtagacaca gctcgtggtg
     3181 atgccgttgc gcaggctctc ctgcaggaag acacgggcga cgccgcgggc gaagtcgtgg
     3241 tcggcgtatt tgagctcggt tgggaaggtg tatttgttca accagtcgag aagccgcgcg
     3301 ccgttggcgc caatcatcgg cgtctgcggg taatggacgt ggctgtcgat gaagcccgcc
     3361 gagatcaacg catcgcggcc ccagtcgcga atctcgacgc cggcgggcag ttcgcgcgag
     3421 acgcggtcgg ctggcccgaa atgacggatc aggccatcct gcatggcgac gatggcgtcg
     3481 ggctcgtgca ccatcgtcgt ggcgagacca tcgcggaacg gatcgccgcg gaaggtcagc
     3541 acggggccgc gcacggccgt gagacgaggc gaagcggccc gcccggtcac aggaaggtga
     3601 cgcgcgcctc gcgttccagc atctgcggta tggtggacgg atcgtcgaac tcgatctcgg
     3661 cctcgaccaa atgggcgctg ccctggccga gatcggcctt gctgcgcttg acgcgcgtca
     3721 cggtcattgg cgcgcgcaca atcttgccgc catagacacg cgagttgcca cggaaggtga
     3781 tttcgaccct gccgccaggg acgaggcgcg gcagatgcag ctcatcgacc tccgccagga
     3841 cgcgcagttg ccgcatgtcg acgatcttgg cgatgccggg gtggcctgga atcagttcgc
     3901 cctggcgggt gtagatctcc gccaccagtc catcgaccgg tgagcggacg agtgacgcgt
     3961 cacggtcggc gcgcgcggtt tcgagtgtgg cctgcgaatt gtcgatgtcg atctggttcg
     4021 ccgccagatc gttcttgagc gcctgcttct gaagctccag ggtggccttc tgatttgcca
     4081 ggtttctttc ggcaatgctc acctccagct ctttctggtc ggccggcctg gccgagcgca
     4141 gccgctcgag gtccttgagc ttgttcaggt cgatcgtcgt ccggacggtc gcctcctgca
     4201 tggcgatccg ggtaacgcgg gctcccgtca gcatggtctc gcgctcctgc ttgagcttct
     4261 gcagattagc ctcggccatc cgcaccgtga tgtccgcccg cggatagttg gacaacacgg
     4321 cgatgatctg gtcgcgtttg accgtctgac cttccttgat acgcaactcg atgaccgtct
     4381 gccctcccag cgggtcgccg gcgatgacaa ccgtgccgtt cgcagcgtcg gtgtagccgc
     4441 gcgcgatgag aggctggttg ttcgcctggt ccctgtcctg ggcgctgctc ctctgccggc
     4501 ttggcgtgag ccacagagcg agagcgacaa tggcgatcat cgtcaccacg cccagtgccc
     4561 tgcctgtcag tccgttcagc cgcgccatgc gaggtcgctc caaagccctg tgcgcccgtg
     4621 gtcattcgac atgagaaggc gcaaggatat ccccatcatc ttgccactgc ctgccaaaaa
     4681 tcaaagggcc cagcggtcgc ccgccaagcc cttgatcttg tttggtggag ccaggcggga
     4741 tcgaaccgcc gacctctaca atgccattgt agcgctctcc cagctgagct atggccccga
     4801 aaccctgagc aggcggcgcg aggtataaat cctgcccttg tggctggcaa cagggggctg
     4861 gcaacggcag ctagcggtcg ctttcgccct tgtcgtcctc gacctcaacc tcgacttcga
     4921 tgtcctcggc ttcgtcggcg agatcgtcgg catcggccag cgcctcgtca ccttcgacat
     4981 cgggcaactc gtcacccgcc agcgccgcct cgtcggactt cttcttggcc gccagttttg
     5041 cggcggccgc tgcggcggcg gccgtcgccg ctgccgccgt cgccgcggcg gcggaaccgc
     5101 gaccccgtcg gaccttcacg aagtcctcgc ggtcatgctc gcggccgcac ttcgggcact
     5161 tgatcgggcc tttgttcaga tcgtagaagc gcgcgccaca gctctggcag gtgcgctttg
     5221 taccccagct cg
//
LOCUS       DASWGA010000224         2581 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2308991, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000224 DASWGA010000000
VERSION     DASWGA010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2308991"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1084
                     /locus_tag="VF991_05395"
     CDS             <1..1084
                     /locus_tag="VF991_05395"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HEX9555907.1"
                     /translation="FFAVARPPPAATVGPAMAQPATGLAADTAPDVALRHIVRECHAD
                     LLKYRAVALQSRRPVGIHQTRVALRRLRAAFGLFRSAVNGPVVRALSAEAKWLAGECA
                     PARDLHVFLNETVHDVPPLVKRIANRLAKAHLERARAALSGARFEGFHRQLEAFIALP
                     PAGTHERLDEFARAVLDKRHNKTVQRGHKLGSLDERRLHRLRIAIKKLRYAAAFLQPA
                     FASPPFASRRAKPYIEATVRLQGALGALNDRAVAAHVLADLATAARPTEDVKQPLKAL
                     AKQAAAGGKRRRRKVERAWQEFRKAGRFWRVEVGAKTKDERHAERGRAAHSGNGTDRL
                     PGQRQDDALEQAAAPAGARRHGGDHQ"
     gene            1029..2072
                     /locus_tag="VF991_05400"
     CDS             1029..2072
                     /locus_tag="VF991_05400"
                     /inference="COORDINATES: protein motif:HMM:NF014542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX9555908.1"
                     /translation="MNKLLRRPELADTAVIINEFGEIGLDHLLVEKSDDEGMVTLNSG
                     CLCCTVRGDLVRTMSELFLKRAKGEVTNFKRMVVETTGLADPAPILHTLMTDPLLASR
                     YRLDGVNGTSTLDNHEEAIKQAAVADRLLLTKSDIADASTLSALKSRLHQLNPGAPFH
                     AVSDGEIDPNEILNAGLYNPETKSADVKRWLHEEAYGHDHGGGHDHHHGHDHDHGHDD
                     HEHGHGEQDPHNVNRHDDRIKAFCMTFDEPMSWSTVAAAFDALVTYRGPDLLRMKGIL
                     NVKDTDKPVVIHGVQHVFHPPATLDAWPEGDDRKSRVVFITRDIAESTIRKVFASFFE
                     AEKKGWGQEQQQQ"
     gene            2263..>2581
                     /locus_tag="VF991_05405"
     CDS             2263..>2581
                     /locus_tag="VF991_05405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HEX9555909.1"
                     /translation="MPGQTLFDKIWDRHVIADLGDGYALLHISRHLMHDGGGRGLQAI
                     KDAGYRVRNPDLTFATFDHVISTEPGRTYDTLKPYAQRLYHMRDEAKRWGIKLFDLGQ
                     PGQG"
BASE COUNT          460 a          929 c          816 g          376 t
ORIGIN      
        1 gttctttgcg gttgcccggc ccccgccggc cgctacggtc gggcctgcaa tggctcagcc
       61 cgctaccggc ctcgccgccg acaccgcccc cgatgtcgcg ttgcggcaca tcgtgcggga
      121 gtgccatgcc gaccttttga agtatcgcgc tgtcgccctg caaagccgcc ggccggtcgg
      181 catccaccag acccgggtgg cgttgcgccg cctgcgcgcc gccttcgggc tgttcaggag
      241 cgccgtcaac gggccggtcg tgcgcgcgct ctcggccgag gccaaatggc tggccggcga
      301 atgcgcgccg gcgcgcgacc tccatgtctt tctcaacgaa accgtgcacg acgtgccgcc
      361 gctcgtgaag cggatcgcca accggctggc caaggcccat ctcgagcgcg cccgcgccgc
      421 cttgtcgggc gcccgcttcg agggctttca ccgccagctc gaggccttca tcgccctgcc
      481 acccgccggc acgcacgagc gcctcgacga attcgcccgc gccgtgctcg acaagcgcca
      541 caacaagacc gtgcagcgcg gccacaagct cggctcgctc gacgagaggc gtctgcaccg
      601 gctgcgcatc gccatcaaga aactgcgcta cgccgccgcc ttcctgcagc cggcctttgc
      661 gtcacccccc tttgcctcca ggagggcgaa gccctatatc gaggcgacgg tgcgcctgca
      721 gggcgcgctc ggcgccctga acgatcgcgc ggtggcggcc catgtgctgg ccgacctcgc
      781 gacggcggcc cgtccgaccg aggacgtgaa gcagccgctc aaggccctcg ccaagcaggc
      841 ggcggccggc ggcaaacgcc gccgccgcaa ggtcgagcgg gcgtggcagg aattcaggaa
      901 ggccgggcgc ttctggcgcg tcgaggtagg agcgaagacg aaagatgagc gacacgcaga
      961 acgcggccga gcagcgcatt ccggtaacgg tactgaccgg cttcctgggc agcggcaaga
     1021 cgacgctctt gaacaagctg ctgcgccggc cggagctcgc cgacacggcg gtgatcatca
     1081 atgagttcgg ggagatcggg ctcgaccacc tcctggtcga gaagtccgac gacgagggca
     1141 tggtcaccct gaactcgggc tgcctgtgct gcacggtgcg cggcgatctg gtgcgcacca
     1201 tgagcgagct gttcctcaag cgcgccaagg gcgaggtcac caacttcaag cgcatggtgg
     1261 tcgagaccac gggcctggcc gaccctgcgc ccatcctgca cacgctgatg accgatcccc
     1321 tgctcgcctc gcgctaccgg ctcgacggcg tgaacggcac cagcacgctc gacaaccacg
     1381 aggaggcgat caagcaggcc gccgtcgccg accgcctgct gctcaccaag tccgacatcg
     1441 ccgacgcttc cacgctcagc gcgctcaaga gccgcctgca ccagctcaat cccggcgcgc
     1501 cgttccatgc cgtctcggat ggcgagatcg atcccaacga gatcctcaat gccggcctct
     1561 acaaccccga gaccaagagc gccgacgtca agcgctggct gcacgaggaa gcctatggcc
     1621 acgaccatgg cggcgggcat gatcaccatc acggccacga tcacgatcac ggccacgacg
     1681 accatgagca tggccatggc gagcaggatc cgcacaacgt caaccgccac gacgatcgca
     1741 taaaagcctt ctgcatgacc ttcgacgagc cgatgagctg gtcgacggtg gcggcggcgt
     1801 tcgacgcgct ggtgacctat cgcgggcccg acctcctgcg catgaagggt atcctgaacg
     1861 tcaaggacac cgacaagccg gtcgtgatcc acggcgtgca gcatgtcttc catccgccgg
     1921 cgacgctcga cgcctggccc gagggcgacg accgcaagag ccgcgtggtg ttcatcaccc
     1981 gcgacatcgc cgagagcacc atccgcaagg tcttcgcctc gttcttcgag gccgagaaga
     2041 agggctgggg ccaggagcag cagcaacagt aactcatgtc gtcctgagcg taagcgaagg
     2101 acctcatcgc cgcctgccac cggcatgaga tccttcgctg cgctcaggat gactggaatc
     2161 ccgcgctgcg gtctttcctt ccgcgcgctc ctgttgtcgg caacgccgaa agatggtggg
     2221 gtgtcggtcc gcgccgcaac gaccgcgcgg gaggaaaacg acatgccggg acagaccctg
     2281 ttcgacaaga tctgggatcg ccacgtcatc gccgatttgg gcgacggcta cgcgctcctg
     2341 cacatcagcc gccatctcat gcatgacggc ggcggccgcg ggcttcaggc gatcaaggac
     2401 gcgggctacc gcgtgcgcaa tcccgacctc accttcgcca ccttcgacca tgtcatctcg
     2461 accgagcccg gccgcacgta cgacacgctg aaaccctatg cgcagcggct ctatcacatg
     2521 cgcgacgagg ccaagcgctg gggcataaag ctgttcgatc tcggccagcc gggccagggc
     2581 a
//
LOCUS       DASWGA010000225         6755 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2309046, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000225 DASWGA010000000
VERSION     DASWGA010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6755
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2309046"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1013)
                     /locus_tag="VF991_05410"
     CDS             complement(<1..1013)
                     /locus_tag="VF991_05410"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX9555910.1"
                     /translation="MADIVIIGGGAMGSSIAYHLVSDANCTGKVIVVERDPTYARASS
                     ALSASSIRQQFSTPLNIHLSRYGIGFLRQASERLGVDLGLKEPGYLFLASDAGAAVLR
                     ANHAIQKGEGCAVELLEPAALRRRFPWMSSDGVALASHGTANEGWFDGPALMQAFRRQ
                     ARERGAVYIADEVVGLAPNAVTLRAGGRLEAGTIVVAAGPWSGDVAALAGIALPVEPR
                     RRSVFVFDYQKVQGRQPPGPMPLVIDPTGTWFRPEGRFHIGGTTPADGNDPPGAPLEV
                     QHQEWDDMVWPVLAARVPAFEAVKVVNSWAGYYEYNTFDQNGIVGRHPGVESLIFATG
                     FSG"
     gene            1113..1244
                     /locus_tag="VF991_05415"
     CDS             1113..1244
                     /locus_tag="VF991_05415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555911.1"
                     /translation="MRFRLGRRDFMSAGLVALNQAAAASLGLTLSPLVMASVDELIE"
     gene            1319..1603
                     /locus_tag="VF991_05420"
     CDS             1319..1603
                     /locus_tag="VF991_05420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017264586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEX9555912.1"
                     /translation="MKSKQKFANVWDALEDTPTKASNMTMRSDLLIALRQRIGTWKVT
                     QAEAARRLQITRPRLNDLLRGRITKFSLETLITLAGRADIHVRLRIDKAA"
     gene            complement(1623..1868)
                     /locus_tag="VF991_05425"
     CDS             complement(1623..1868)
                     /locus_tag="VF991_05425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555913.1"
                     /translation="MKRIVLITFLVAGCSGDNLNTSRGPNGETIVGNDVSVQITSATN
                     QQAAFSLAEDYCRKNKRAARFVAQTGPTAAFDCVKTN"
     gene            complement(2084..3406)
                     /locus_tag="VF991_05430"
     CDS             complement(2084..3406)
                     /locus_tag="VF991_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9555914.1"
                     /translation="MARIARRRVLKLSASGAIAAHAGGLAGILASGRAPALAQETSVH
                     WLRWADFVPASDTLLKGPITQECKKATGITLKVETVNANDLQSRITSAIQSGAGADII
                     MGFGNWPQLYGQSLADVGDLAEELGKAGGGYYDVSRQVATVGNKWIGVPFTTGGGLIA
                     YRKSWLEEAGYKTFPETWDTFREAGKKLKAKGRPIGQTAGHTFGDAPGWWYPFLWSFG
                     GKEVEADGKVVLNSKETVESIKFAVALWKETMDEGGLAWDDTNNNRAFLSQTISATNN
                     GASIYIEAKKKPDTYKTEKNTPMWEDIRHAPIPKGVAGQYNLPGVFTDMLMGYSKNQK
                     AAKDFLRWIHSKPVYDQWFTSQQGYTSGATKDWAKHAVWDVDPVLKPFKDLPTFGRLA
                     GYAGPPDRKSAEVISKYIIVDMYAKAIQGMPAEEAAKWAHSEAAKAYA"
     gene            complement(3543..4877)
                     /locus_tag="VF991_05435"
     CDS             complement(3543..4877)
                     /locus_tag="VF991_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9555915.1"
                     /translation="MQFNKLSRRRVVAGGAAIGLVGAPFVRSAHAAGTLTIGLWDHWV
                     PGANDVTSAIIKEWADREKVDVKVDYITSQGNKLLLTLAAEAQAKSGHDIMEFTNWES
                     AQHNASLEAVDDVIKSVLARNGPIDPAVEYLGKFEGRWLGVPMTRGTLLLGCCTRFDL
                     MKEHAGVDVQALYPAGKPPADASWTWDAFLAAAEKCQKGGFAFGLPLGSTTDTNQWVG
                     ALFLAYGAEVMDAKGNVTVKSDAVRQVLEYGKKLAAFCPPDAPSWDDASNNKWLLSGK
                     GALIFNPPSAWAVGKRDAPQVAEKCWTHGFPKGPKGRFNPILPRFYGIWSFSKNKLAA
                     KSLLEFLTLRQNAEKQVAASQGYDIPPYQKFNDFKTWDEEGPPKGSLYHYPIRGGDQV
                     AGVTCSPAPPLIAAQIWSQSIQAQMVVRYFKGEAMDKVVDWAAREVEGFKRT"
     gene            complement(5047..6690)
                     /locus_tag="VF991_05440"
     CDS             complement(5047..6690)
                     /locus_tag="VF991_05440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003517536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX9555916.1"
                     /translation="MTSRPSTLDPITIEVIGAAMGSIVEEAGETLIRASHSTNIKERR
                     DCSTALFNAAGETLCQAEHIPIHLGSFLDLVPHIMRRYPTQDIRPGDAFIGNDAYEGG
                     GTHLPDIVLAEPIFIDGRLVAWTVNLAHHADFVDRGHAHIYQEGLRIPPVRLYRAGEL
                     QGDVQDLILLNCQVPSERLSDLRAQMAANRVGVKRFQALAAKYGTETVLAAGAALMDY
                     AERKMRTAIANMPDGTWRFEDVFDNEEVAATLPLSVEVTVKGDSMSLAFDAPEQMRAG
                     INMTYTALLATTYYVVKSVLDPTIPPNAGLARPLSIAAPQGSILNCLAPAAVNGRLQT
                     CQRVADMILGALAQAVPERVMACSNSACIVAYFIGKRPQDGSTWVYLETIGGGSGARA
                     TKDGLDGVHVHTTNTSNLPVEALEIEYPLTLMRYELVADSGGVGQYRGGMGLRRVYQA
                     THDCRVRVDLTRQRSRSWGLFGGGPGAHGRVECGPGVVFDGDSAVLKAGQWFGLVTPG
                     AGGLGPPGRRDPAAAARDLAEGAISPATAREVYGVPQAT"
BASE COUNT         1071 a         2217 c         2259 g         1208 t
ORIGIN      
        1 tggcccgaga agccggtggc gaagatcagg ctttcgaccc cgggatgccg accgacgatg
       61 ccgttctggt cgaaggtgtt gtactcgtag tagccggccc aggaatttac gaccttgact
      121 gcctcgaagg ccggcacgcg cgcggccaga accggccaca ccatgtcgtc ccattcctgg
      181 tgctggacct ccagcggcgc gccgggcggg tcgttgccgt cggccggcgt cgtgccgccg
      241 atatggaagc ggccctccgg ccggaaccag gtgcccgtgg gatcgatgac cagcggcatc
      301 gggcccggcg gctggcgccc ctgtaccttc tgatagtcga acacgaacac cgagcgccgg
      361 cgcggctcga ccggcagcgc gatcccggcc aatgccgcca cgtcgcctga ccatgggccg
      421 gccgcgacga cgatcgtgcc ggcctccagc cggccaccgg cgcgcaacgt gacggcgttc
      481 ggcgccagcc ccacgacctc gtcggcgatg tagacggcgc cccgctcgcg cgcctggcgg
      541 cggaaggcct gcatcagcgc cgggccgtcg aaccagccct cgttcgccgt gccatgcgac
      601 gccaacgcca cgccatcact ggacatccag ggaaaccggc ggcgcagtgc cgccggttcg
      661 agcagctcga ccgcgcaccc ctcgcccttc tggatcgcgt gattggcgcg caacaccgcc
      721 gcgcccgcat cgctcgccag gaagagatag cccggctcct tcagcccgag atcgacgccc
      781 agccgctcgg atgcctgtcg caggaagccg atgccgtagc gcgacaagtg gatgttgagc
      841 ggcgtggaga attgctggcg gatcgagctg gccgacagcg ccgacgaggc gcgggcatag
      901 gtcggatcgc gctcgaccac gatgaccttg ccggtgcagt tggcatcgga cacgagatgg
      961 taggcgatcg acgagcccat cgcgccgccg ccgatgataa caatgtcagc cataggcgga
     1021 gcctttattg cgcggcgcgg cgcggactgt aaactccgca ggtgttgccg ttcgacagcc
     1081 gtccgatcca gcctcgatga gaggaggcag aggtgcgctt tcgtctcggg cgtcgcgact
     1141 tcatgtccgc cggactcgtc gcgctcaacc aggcggcagc tgcgtcgttg ggactgaccc
     1201 tgtcgccgct ggtcatggcg tcggtcgacg agctgattga gtgatcaagc cagtcacaaa
     1261 cgttccggga gatcatggca gcgctgagat tttcgtttgc tgagatgaga caatggccat
     1321 gaagtcaaag cagaaattcg ccaatgtgtg ggacgccttg gaagatacgc ccacgaaggc
     1381 ctccaatatg acgatgcgat cggacctcct gatcgccctc cgccagcgga tcgggacgtg
     1441 gaaagtcacc caagccgagg ccgcgcgtcg gctacagatc actcggccgc gactgaacga
     1501 cttgttgcgc ggacggatca ccaaattcag cctggagaca ctgatcacgc tcgctggtcg
     1561 agccgatatc cacgtgcgcc ttcggatcga caaggcggca tagtggtttc tacgccaaag
     1621 gactagttgg tcttcacgca gtcgaaggca gcggtaggac cggtttgagc aacgaaccga
     1681 gcagcacgct tgttcttgcg acagtagtct tcggccaaag aaaacgctgc ctgctggttg
     1741 gtagcgctgg tgatctggac tgacacgtcg ttgccgacga tggtctctcc attggggccg
     1801 cgcgacgtgt tgagattgtc tcccgaacac cccgccacaa gaaaggtgat aaggacgatt
     1861 cgcttcatga tgggagggta gcgccgcggc ggcgcaaatc aatcgttcca gcggtgacat
     1921 cactgtgccg atgctgcacg cgatgtgcgc ggtcgtcagt ccttccgcag tgtgcccaac
     1981 gcgtagagtg ccgcccagtc atcaacgagc gacgacccct ccggcccttc gggccacctc
     2041 cccatcgcgg actccgcgat ggggaggagt gccgtgacgt aggtcacgcg tacgccttgg
     2101 ctgcctccga gtgcgcccac ttggcggctt cctcggccgg catgccttgg atcgccttgg
     2161 cgtacatgtc gacgatgatg tacttgctga tcacctcggc ggacttgcgg tcgggcggcc
     2221 cggcatagcc cgccagccgg ccgaatgtcg gcaggtcctt gaagggtttc agcaccggat
     2281 cgacgtccca taccgcgtgc ttggcccagt ccttggtggc gcccgaggtg tagccctgct
     2341 gcgaggtgaa ccactggtcg tagaccggct tggagtggat ccagcgcagg aagtccttgg
     2401 ccgctttctg gttcttcgag tagcccatca gcatgtccgt gaagacgccc ggcaggttgt
     2461 actggccggc gacccccttg gggatggggg cgtgccggat gtcctcccac atcggcgtgt
     2521 tcttttcggt cttgtacgtg tcgggcttct tcttggcttc gatgtagatc gaggcgccgt
     2581 tgttggtggc gctgatggtc tgggacagga aggcgcggtt gttgttggtg tcgtcccagg
     2641 ccagcccgcc ctcgtccatg gtctccttcc atagcgcgac ggcgaacttg atcgattcga
     2701 ccgtctcctt gctgttcagc acgaccttgc cgtcggcctc gacttccttg ccgccaaacg
     2761 accacaggaa gggataccac cagcccggcg cgtcgccgaa cgtgtggcct gcggtctggc
     2821 cgatcggccg ccccttggcc ttcagcttct tgccggcctc gcggaaggtg tcccaggtct
     2881 cggggaaggt cttgtagccg gcttcctcga gccacgactt gcggtaggcg atcagcccgc
     2941 cgccggtcgt gaacggcacg ccgatccact tgttgccgac ggtggcgacc tggcgcgaga
     3001 cgtcgtagta gccgccgccg gccttgccga gctcctcggc caggtcgccg acgtcggcca
     3061 ggctctggcc gtagagctgc ggccagttgc cgaaccccat gatgatgtcg gcgccggctc
     3121 cggactggat cgccgaggtg atgcgcgact gcaggtcgtt ggcgttcacg gtctcgacct
     3181 tgagcgtgat gccggtcgcc ttcttgcatt cctgcgtgat cggacccttg agcagcgtgt
     3241 cggaggccgg cacgaaatcg gcccaacgca gccagtggac agacgtctcc tgcgccaagg
     3301 ccggcgcccg tccgctggcc aggatgccag cgaggccgcc ggcatgcgcc gcgatggcgc
     3361 cggatgcgga cagtttcaga actctacgcc gcgcgatgcg agccatgatt tcctcccgtg
     3421 attgttgtgc gctggaacta cgcgtgggtg tgcgctgaag cgatgcccct ccggccccct
     3481 tatcggacaa aggaggccac ttccccatcg tggactgcgc gatggggagg gacatcctga
     3541 ggtcaggttc gcttgaaccc ttcgacttct cgtgccgccc aatcgaccac cttgtccatc
     3601 gcctcgccct tgaagtagcg gacgaccatc tgggcctgga tcgactgcga ccagatctgc
     3661 gcggcgatca gcggcggcgc cggcgagcag gtgacgcctg cgacctgatc gccgcccctg
     3721 atcggatagt ggtagagcga gcccttgggg ggtccctcct cgtcccaggt cttgaagtcg
     3781 ttgaacttct gatagggcgg gatgtcgtag ccctggctcg ccgcgacctg cttctcggca
     3841 ttctggcgca aggtgaggaa ctcgagcagg ctcttggcgg ccagcttgtt cttcgagaag
     3901 ctccagatgc cgtaaaagcg cggcaggatc ggattgaacc gtcccttcgg ccccttcggg
     3961 aagccatgcg tccagcattt ctcggcgacc tggggagcat cgcgcttgcc gacggcccac
     4021 gcgctcggcg ggttgaagat cagcgcgccc ttgccggaga gcagccactt gttgttcgac
     4081 gcgtcgtccc acgacggtgc atccggcggg cagaacgcgg cgagcttctt gccgtactcg
     4141 agcacctgac ggacggcgtc cgacttgacc gtgacgttgc ccttggcatc catgacttcc
     4201 gcgccatagg ccaggaacaa ggcgccgacc cactggttgg tgtcggtggt cgacccgagc
     4261 ggcaagccga aggcaaagcc gcccttctgg cacttctcgg ccgccgccag gaaggcgtcc
     4321 caggtccagc tcgcgtcggc cggcggcttg ccggccgggt agagcgcctg gacgtcgacc
     4381 ccggcatgtt ccttcatcaa gtcgaaccgg gtgcagcagc cgagcaggag agtgccccgc
     4441 gtcatcggca cgcccagcca cctgccttcg aacttgccga gatattcgac cgccggatcg
     4501 atcgggccgt tcctggcgag gacgctcttg atgacgtcgt cgacggcttc gagcgacgcg
     4561 ttgtgctgcg ccgactccca gttggtgaat tccatgatgt cgtggccgga cttggcctgc
     4621 gcttcggccg ccaaggtgag cagcagcttg ttgccctggc tggtgatgta gtcgaccttc
     4681 acgtcgacct tttccctatc cgcccactcc ttgatgatcg ccgacgtgac atcgttggcg
     4741 ccggggaccc agtgatccca aagcccgatg gtgagggttc ccgcggcgtg ggcgctgcgc
     4801 acgaacggcg cgccgacaag gccgatggca gcgccgccag ccacgactcg acgacgggac
     4861 agtttgttga attgcatgac actcgccctc cctgaagaac gcttgcgcac gcgtacagac
     4921 gctgattgtt atttagcggt atggagaggc cctcccgcca gccgtgatgg ctgcgcagtc
     4981 cccccgtgct ttccagtgct ccgagcttag ccagcgaccg ctggcagcac cagacgatat
     5041 tggcttctac gttgcttggg ggacgccgta gacctctcgc gccgtcgccg ggcttatggc
     5101 gccctcggcc agatcgcgcg cggcggccgc ggggtcgcgc cgcccgggcg ggcccaagcc
     5161 gcccgcgccc ggcgtcacca ggccgaacca ctggccggcc ttcagcaccg ctgaatcgcc
     5221 gtcgaagacc acgcccgggc cgcattccac ccggccatgc gcgccggggc cgccgccgaa
     5281 caggccccag cttcgcgagc gctggcgggt gaggtcgacc cgcacccggc agtcgtgggt
     5341 cgcctggtag acacgccgca agcccatgcc gccgcgatac tggccgacgc cgccggagtc
     5401 ggcgaccagc tcgtagcgca tcagggtcaa cggatattcg atctccagcg cctcgaccgg
     5461 caggttcgag gtgttggtgg tgtggacatg cacgccgtcc agcccgtcct tggtggcgcg
     5521 cgcgccgctg ccgccgccga tcgtctcgag atagacccag gtcgagccgt cctgcggccg
     5581 cttgccgatg aaataggcga cgatgcaggc cgagttcgag caggccatga cgcgctcggg
     5641 cacggcttgg gcgagcgcgc ccaagatcat gtcggcgacg cgctggcagg tctgcaggcg
     5701 gccgttgacc gcggcgggcg ccaggcagtt gaggatgctg ccctggggtg ctgcgatgct
     5761 gagcggcctg gcgaggccgg cattgggcgg gatggtcggg tcgagcacgg acttcacgac
     5821 gtaataggtg gtggcgagca gcgccgtgta ggtcatgttg atgccggcgc gcatctgctc
     5881 gggcgcgtcg aaggcgagcg acatgctatc gcccttcacc gtcacctcga ccgacagcgg
     5941 cagcgtggcg gccacctcct cattgtcgaa cacatcctcg aagcgccagg tgccgtcggg
     6001 catgttggca atggcggtgc gcatcttgcg ctcggcgtag tccatcagcg ccgcgccggc
     6061 ggccagcacc gtttctgtgc cgtacttcgc cgccagcgcc tggaagcgtt ttacgccgac
     6121 ccgattggcg gccatttgcg cgcgcaggtc ggacaaccgc tcgctcggca cctggcagtt
     6181 cagcaggatc aggtcctgca cgtcgccctg cagctcaccg gcgcggtaga ggcggaccgg
     6241 cgggatgcgc agtccctcct ggtagatgtg ggcgtggccg cgatcgacga agtcggcatg
     6301 gtgcgccagg ttcaccgtcc aggcgaccag gcggccgtcg atgaagatcg gctcggccag
     6361 cacgatgtcg ggcaggtgcg tgccgccgcc ttcataggcg tcgttgccga tgaaggcgtc
     6421 gcctggccgg atgtcctggg tcgggtagcg ccgcatgatg tgcggcacca ggtcgaggaa
     6481 gctgccgaga tggatcggga tgtgctcggc ctggcagagc gtctcgccgg ccgcgttgaa
     6541 cagcgccgtc gagcagtcgc gccgctcctt gatgttggtc gaatgcgagg cacggatcag
     6601 cgtctcgccg gcctcttcga cgatcgagcc catggcggcg ccgatcacct cgatggtgat
     6661 gggatcgagg gtgctgggac gcgatgtcat gagtcgccgc tgggggcgcg ccactccagt
     6721 ggcgcgtctt tgtggatacc gaaatgaacg cgcca
//
LOCUS       DASWGA010000226         8372 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_784680, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000226 DASWGA010000000
VERSION     DASWGA010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8372
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784680"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /gene="pyrH"
                     /locus_tag="VF991_05445"
     CDS             <1..409
                     /gene="pyrH"
                     /locus_tag="VF991_05445"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215876.1"
                     /note="Catalyzes the phosphorylation of UMP to UDP;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEX9555917.1"
                     /translation="PMTTVCEPYIRRRAARHMEKGRVVIFAAGTGNPFFTTDTAAALR
                     AAEMSVDAMLKGTQVDGVYSADPRKEKDAKRYDTLNYMDVLSRDLQVMDASAISLARE
                     NRIPIIVFDIHKPGAFAATMRGEGTFTIIKDEG"
     gene            411..965
                     /gene="frr"
                     /locus_tag="VF991_05450"
     CDS             411..965
                     /gene="frr"
                     /locus_tag="VF991_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006728461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEX9555918.1"
                     /translation="MTADLNELEKRMQSAMDALKKELAGLRTGRASVNLLDPVMVEAY
                     GQRMALNQVGTVSAPEPRLLTVNVWDKGLVVSTAKAIREAGLGLNPAPDGQLIRIPIP
                     ELTAERRNELAKLAHKYAEHGRVAVRNVRRDGMEALKKAEKDHKISQDEHRHKSDEVQ
                     KLTDRYVKLVDEVLVHKEKEIKTV"
     gene            965..1705
                     /locus_tag="VF991_05455"
     CDS             965..1705
                     /locus_tag="VF991_05455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEX9555919.1"
                     /translation="MSTASLPANSDPTPGPNHVAIIMDGNGRWAKARGLPRVAGHRRG
                     ADAVRRVVRGAGELGIPVLTLFAFSTENWTRPADEVADLMGLLRHYLRSELDELLKNG
                     AKLRVIGDRAGLPDDIVRDISDAETMTRANSRIDVNICINYGARAEILQATRSLARQV
                     AAGELSPDRIDEGRFERELLTAGVPDPDLLIRTSGEQRISNFLLWQCAYAELVFVDTL
                     WPDFSKEHLEQAIAEFRRRERRYGGVGG"
     gene            1686..2381
                     /locus_tag="VF991_05460"
     CDS             1686..2381
                     /locus_tag="VF991_05460"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008595601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEX9555920.1"
                     /translation="MAASAADAPTGRSQRYRGLLLRILSAAILGPLLLAAIWFGFPWI
                     DLVAALAAPLMVSEWIRLTRQRPFIRLLAILYALAALLALLWLRHQPSLGRETVIWIV
                     LGIWATDTGAYVVGRSAGGAKLAPRISPGKTWSGLLGGMAWAAVASAAVGYAFGLGET
                     VHLAVIGAGLAVVGQIGDLVESAAKRSAGVKDSGTLIPGHGGLLDRIDGLVAVLVAVA
                     LVRLFVGGTWPWT"
     gene            2366..3580
                     /gene="dxr"
                     /locus_tag="VF991_05465"
     CDS             2366..3580
                     /gene="dxr"
                     /locus_tag="VF991_05465"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEX9555921.1"
                     /translation="MAVDMMQWSAPSSDRPRGVTILGSTGSVGQSTADLIARAPECYR
                     VEALVAGNSVEALAEQARRLRARLAVVANPQRYRALKDALVGTSIEAAAGPEAVIEAA
                     TRPAEWVMAAVVGFAGLESTLVAARRGAMVALANKEALVCAGRLLMDAVEDSGGVLLP
                     VDSEHNAIFQVLEPRHRHAIDRLILTASGGPFRNWSLADMAEATPEQALAHPNWDMGA
                     KISIDSATMMNKGLELIEAHLLFGLPADQVEIVVHPQSVIHSMVAYRDGSVLAQLGTP
                     DMRVPITHALGWPSRIDGPAARLDFIGLSALTFEQPDSGRFPSLRLAREALVIGGFAP
                     IVMNATNEVAVAAFLARRIGFLDIARIVEDVMAEWQELSAPVESLQQIHAADVEARCR
                     AERACQKKLLSN"
     gene            3611..4990
                     /gene="rseP"
                     /locus_tag="VF991_05470"
     CDS             3611..4990
                     /gene="rseP"
                     /locus_tag="VF991_05470"
                     /inference="COORDINATES: protein motif:HMM:TIGR00054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEX9555922.1"
                     /translation="MHGFISLFTTYLPYFILVLTLLVFVHEFGHYWVGRRFGIHAEVF
                     SIGFGPELLGWTDRSGTRWKISAIPLGGYVKFLGDNDATSATPSAEPLSSEQQRRAFF
                     NQPLHARAAVVLGGPAANLVFAFLLLTAVFFFAGEPYSPPIVAVQVDGPAAKGGLHTG
                     DEIVRLGDQRIDRYEDIQDSQFLYWTKPMAVEYRRGNQLLHGEIQPQFCERTDRYNNT
                     FRFGELGMDQLVRPVVGGFTQNSPAEAAGLKVGDVLLEIDGKPVDYFSRIPELIGNRA
                     GQPLTVKYDRDGARGETTVVPIADKAVDCAGKEHMVGRLRVRPAGVTEYRSHGVLGAM
                     GAGVRHVWSVTTMFYTSMAQILTATRPVDELGGPIRIAKAAGEASIAGWVSILNLVIA
                     LSVVLGVFNLLPVPMLDGGHLAMYLYEAVRGKPLSLRAQELGLRVGFALVIGMALIAT
                     FNDIRLLLR"
     gene            5117..7423
                     /gene="bamA"
                     /locus_tag="VF991_05475"
     CDS             5117..7423
                     /gene="bamA"
                     /locus_tag="VF991_05475"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEX9555923.1"
                     /translation="MRLIFRWAVLAVAAILAFGGAAHAQRGTPAAAPAGGTITAIQIQ
                     GNVRAERETIRSYLQLKEGQAYDPAAADRSLKALFGTGLFSDVVIEMQGSTLVVKVTE
                     NPIINRVAFEGNSKIEDDKLRDEVQSKPRQVFTRARVQADVERILTIYRRGGRYNASV
                     EPKVIKLEQGRVDLVFEINEGDVTGVQRISFVGNEHFSDGTLRGKIRTSESAWYRFLS
                     SDDRYDPDRLNLDRELLRKFYLSEGYADFRVVSAVAELAPNREGFFITITISEGERYK
                     FGKVDVSTRFQGLDVDVLKSFLTMNEGDWYDANAVEKTVAALSDIVGSLGYAFVDVRP
                     NIRRNKDNLTIDVTFDIQEGPRVYVERINISGNTRTLDKVIRREFRLAEGDAFSTAKV
                     RRSQERLRNLGFFEKVDVSAAPGSAPDKTNLEVQVVEQSTGDISFGAGYSTTSGILGD
                     ISLKERNLLGKGQELRLGFSIGTLSTLVDLSFTEPYFLDRPMAAGFDIFRTSNDRQAV
                     ASYNDASIGFALRAGWAYTEHTRQNVRYTLRQTDIYNVQPFASFVVQANAGTSVVSEV
                     SETIAWDTRDTRLNTTKGLLLRNTVAVAAAPGTEQYLRTTADAVYYQTIIEDFVASIG
                     GSIGAVFPYNGSSLRLNNLFFIGGDTLRGFRVGGIGPRDSNTTDSLGGTYFYTGTTEL
                     SFPVGLPKEIGIIGKAFVDVGSLWGLGGPAATSTSVLTSNTMRVGAGVGVQWISPFGP
                     IRIDYAIPVVQDPWDRTENIRFSFGTRF"
     gene            7437..7913
                     /gene="fabZ"
                     /locus_tag="VF991_05480"
     CDS             7437..7913
                     /gene="fabZ"
                     /locus_tag="VF991_05480"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEX9555924.1"
                     /translation="MNIQTDSTSLATGSAVDIKRILQMIPHRYPMLMVDRVVDMQLDH
                     SAVGIKNVSINEPFFQGHFPSEPVMPGVLIVEAMAQTAAVLVVATFGGQSEGKLVYFM
                     SIDGVRFRRPVVPGDRLELHVEKIQSRGNVWKFSGKAMVEGKVAAEATFAAMIRDR"
     gene            7925..8332
                     /gene="gloA"
                     /locus_tag="VF991_05485"
     CDS             7925..8332
                     /gene="gloA"
                     /locus_tag="VF991_05485"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019856614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEX9555925.1"
                     /translation="MPDTAANYRMLHTMIRVKDLDKSLAFYTGPMGMKLLRKRDVPDG
                     KYSLAFVGYGDEKEHAVVELTYNWDQEKPYDIGTGFGHLAVGVPDVHGLCEQIGKAGG
                     KVTRAPGPVKFGTTVIAFVEDPDGYKIELIERK"
BASE COUNT         1427 a         2747 c         2731 g         1467 t
ORIGIN      
        1 ccccatgacc accgtgtgcg agccctacat ccgccgtcgc gcggcgcgcc acatggagaa
       61 gggccgcgtg gtgatcttcg ccgccggtac cggcaacccg ttcttcacga ccgacaccgc
      121 agcggcgctg cgcgccgccg agatgagcgt cgatgcgatg ctcaagggca cccaggtcga
      181 cggtgtctat tccgccgatc cgcgcaagga gaaggacgcc aagcgctacg atacgctgaa
      241 ctacatggac gtgctgtcgc gcgacctgca ggtcatggac gcttcggcga tctcgttggc
      301 tcgcgagaac cgcatcccga tcatcgtgtt cgacatccac aagcctggcg cattcgccgc
      361 cacgatgcgc ggcgagggga ccttcaccat catcaaggac gagggctgag atgactgcgg
      421 acctcaacga actcgaaaag cgcatgcaaa gcgcgatgga cgcgctgaag aaggaattgg
      481 caggcctcag gacaggccgc gcctcggtca atctcctcga tccggtgatg gtcgaggctt
      541 acggccagcg catggcgctg aaccaggtcg gcaccgtgag cgcgcccgag ccgcgcctgc
      601 tcaccgtcaa tgtctgggac aagggcctgg tcgtctcgac cgccaaggcg atccgcgagg
      661 ccggcctcgg gctgaacccg gcgcccgacg gccagttgat ccgcattccc attcccgaac
      721 tcaccgccga gcggcgcaac gagcttgcca agcttgccca caaatacgcc gagcatggcc
      781 gcgttgcggt gcgcaacgtg cggcgcgacg gcatggaagc gctgaagaag gccgagaagg
      841 accacaagat ctcgcaggac gagcatcgcc acaagtccga cgaggtgcag aaactcaccg
      901 accgttacgt caagctggtc gacgaagtgc tcgtccacaa agaaaaagag atcaagacgg
      961 tctgatgtcg actgcgtctc tgcccgccaa ttcggacccg acgccgggtc ccaaccatgt
     1021 cgccatcatc atggatggca atggcaggtg ggcgaaggcg cgcggcctgc cgcgggttgc
     1081 cggtcaccgt cgcggcgccg acgccgtgcg gcgtgtcgtg cgcggagccg gcgagctcgg
     1141 catcccggtg ttgaccctgt tcgccttctc gaccgagaac tggacgcggc cggccgacga
     1201 ggtggccgac ctgatgggcc tgctgcgcca ctatctgcgc agcgagctcg atgagttgct
     1261 gaagaacggc gccaagctca gggtcattgg cgatcgcgcg ggcctgccgg acgacatcgt
     1321 gcgcgacatt tccgacgccg agacgatgac ccgcgccaac agccgcatcg acgtgaacat
     1381 ctgcatcaac tacggcgcgc gtgccgagat cctgcaggcc acccgcagtc ttgcccggca
     1441 ggtcgcggca ggcgaactgt cgcccgatcg catcgacgag ggtcgcttcg agcgcgagct
     1501 gctgacggcg ggcgtgcccg atcccgacct cttgatccgc accagcggcg agcagcgcat
     1561 cagcaatttc ctgctctggc agtgtgccta tgccgaactg gtgttcgtcg acaccctgtg
     1621 gccggatttc agcaaggagc atctggagca ggcgatcgcc gagtttcgcc ggcgtgagcg
     1681 gcgctatggc ggcgtcggcg gctgacgccc cgacggggcg tagccagcgg tatcggggcc
     1741 tgcttctgcg gatcctgtcg gccgccatcc tggggccgct tctgctcgcg gcgatctggt
     1801 tcggcttccc ctggatcgac ctggtggcgg cgctggcggc gccgctgatg gtttcggaat
     1861 ggattcgcct cacgcggcag cggcccttca tacgtcttct cgccatcctc tacgcgctgg
     1921 ccgctctcct ggcgctgctc tggctgcgcc atcagccgtc gctgggccgc gaaaccgtga
     1981 tctggatcgt gctcggcatc tgggcgaccg ataccggtgc ctatgtcgtt ggccgctcgg
     2041 ccggcggcgc caagctcgcc ccgcgcatca gccccggcaa gacctggtcg gggctgctgg
     2101 gcggcatggc ctgggcggcc gtggcgagcg ccgccgtggg ttatgccttc ggcctcggcg
     2161 aaacggtcca tctcgcggtg attggcgccg ggctggcggt ggtcggtcag atcggcgatc
     2221 ttgtggaatc ggcggccaag cggagcgccg gggtgaagga cagcggcacg ctgatcccag
     2281 gccatggcgg gctgctcgat cgcatcgacg gactggtcgc cgtgctggtc gcggtggcgc
     2341 tggtgcgatt gtttgtgggt ggaacatggc cgtggacatg atgcagtggt cggcaccgtc
     2401 gagcgatcgg ccgcgcggcg tgacgatcct cggctcgacc ggatcggtcg gccagagcac
     2461 ggccgacctg atcgcgcgcg ctcccgagtg ctatcgggtg gaggcgctgg tcgccggcaa
     2521 ctctgtcgag gcgttggctg agcaggcacg ccgcctgcgc gcgcgtcttg ccgtggtcgc
     2581 caatccacag cgttaccggg cgctgaagga tgctttggtc ggcacgtcca tcgaggccgc
     2641 ggccgggcct gaggcggtga tcgaagcagc cacccggccg gccgaatggg tgatggccgc
     2701 ggtcgtgggc ttcgccggcc tcgaatcgac tctcgttgcc gcgcgccggg gcgccatggt
     2761 ggcgttggcc aacaaggagg cgctggtctg cgccgggcgg ctgctgatgg acgccgtcga
     2821 ggactccggc ggcgtgctgc tgccggtcga ttcggaacac aacgcgatct tccaggtgct
     2881 cgagccgcga caccgtcacg cgatcgaccg gctgatcctg acggcatcgg gcgggccgtt
     2941 ccgcaactgg tcgctggccg acatggccga ggccacgccc gagcaggcgc tggcccatcc
     3001 caactgggac atgggcgcca agatttcgat cgattccgcc accatgatga acaagggcct
     3061 ggagctcatc gaggcccatc tgctgttcgg cctgcccgcc gaccaggtcg agatcgtcgt
     3121 tcatccgcag tcggtgatcc attccatggt ggcctatcgc gacgggtcgg tgctggcgca
     3181 gctcggcacc cccgacatga gggtgccgat aacgcatgcg ctgggctggc cctcgcgcat
     3241 cgacgggccg gcggcgcggc tggacttcat cggcctgtcg gcgctcacct tcgaacagcc
     3301 cgattccggc cgctttccct cgttacggtt ggcgcgtgag gccttggtga tcggcggatt
     3361 tgcccccatc gtgatgaacg cgaccaacga agtggctgtc gcggcgtttt tagcgcgccg
     3421 catcggcttc ctcgatatcg cccgcatcgt cgaggacgtc atggcggagt ggcaggagct
     3481 gtcggcgccg gtcgaatcgc tgcagcagat ccatgccgcc gacgtggagg cccgttgccg
     3541 ggccgagaga gcctgtcaaa agaaattgct aagcaattga aataacacaa atctcgtggt
     3601 gtactgaacc atgcacggct tcatcagcct gttcacgacc tacctgccat acttcatcct
     3661 ggtgctgaca cttctcgtgt tcgtacacga gttcggccac tactgggtgg gtcgtcgctt
     3721 cggtatccat gccgaggtat tttccatcgg tttcgggccg gaactgctcg gctggaccga
     3781 ccgcagcggc acgcgctgga agatttcggc cattcccctg ggcggctacg tcaagttcct
     3841 gggcgacaac gacgccacca gcgccacgcc ctcggccgag ccgctgagct ccgaacagca
     3901 gcggcgcgcc ttcttcaacc agccgcttca cgcgcgtgcc gcggtggttc tgggcggtcc
     3961 ggcggccaac ctggtgtttg ccttcctcct cctgacggcg gtcttctttt tcgccggcga
     4021 gccttattcg ccgccgatcg tcgccgtcca ggtcgatgga ccggcggcca aggggggatt
     4081 gcacacggga gatgagatcg tgcgtctggg cgaccagcgc atcgaccgtt acgaggacat
     4141 ccaggattcg cagttcctgt actggaccaa gccgatggcg gtcgagtacc ggcgcggcaa
     4201 ccagctgctg cacggcgaaa tccagccgca gttctgcgag cgtaccgacc gctacaacaa
     4261 caccttccgc ttcggcgaac ttggcatgga ccagctcgtt cgcccggtcg tcggcggctt
     4321 cacgcagaac agcccggccg aggcggcggg attgaaggtc ggtgacgtgc tgctcgagat
     4381 cgacggcaag ccggtcgact acttctcgcg cattcccgag ctgatcggca atcgcgccgg
     4441 ccagccgctg acggtgaagt atgaccgcga cggcgcgcgg ggcgagacca ccgtagtgcc
     4501 gatcgccgac aaggcagtcg actgcgccgg caaggagcac atggtcggcc gcttgcgcgt
     4561 gcgccccgcc ggcgtcaccg agtatcgcag ccacggggtg ctgggcgcga tgggcgctgg
     4621 cgtgcgtcat gtgtggtccg tgacgacgat gttctacacg tcgatggccc agatcctgac
     4681 cgcgacccgg ccggtcgacg agctcggcgg accgattcgc atcgccaagg cggcgggcga
     4741 ggcatcgatt gccggctggg tcagcatcct caatctggtg attgcgctct ccgtcgtgct
     4801 cggcgtgttc aacctcctgc cggtgccgat gctcgatggc ggtcatctcg cgatgtatct
     4861 ctacgaagcc gtgcgcggca aaccgctcag cttgcgggcg caggagctcg gcttgcgggt
     4921 gggctttgcc ctggtgatcg gcatggccct gatcgcgacg ttcaacgaca tcaggctttt
     4981 gctgcgctga gccgaccgat gcggtggggc ttgcattggg ggacaaaagg gtggccaaag
     5041 gggtggctaa gtcgcggatg tcggtctatg aaccagtgtt cctgaaactg gccggcaggt
     5101 ctggaaggtg ccgggggtgc gtttgatctt tcgttgggct gtactggccg ttgctgccat
     5161 tctcgcattc ggtggagcgg cgcatgctca gcgcggcacg cctgcggccg caccggcagg
     5221 cgggacgatc actgctatcc agatccaggg caacgtccgc gccgagcgtg agacgatccg
     5281 ctcctatctg cagctcaagg aaggccaggc ctacgacccg gcggcagccg accggtcgtt
     5341 gaaagcgctg ttcggaaccg gacttttctc ggacgtcgtg atcgaaatgc agggctcgac
     5401 cctggtcgtg aaggtcaccg agaacccgat catcaatcgc gtcgccttcg agggcaacag
     5461 caagatcgaa gacgacaaat tgcgcgacga ggtgcagtcc aagccgcgcc aggtgttcac
     5521 gcgtgcgcgc gtgcaggccg acgtcgagcg catcctcacc atctatcgcc gcggcgggcg
     5581 ctacaacgcc tcggtcgagc ccaaggtcat caagctcgag cagggccgcg tcgacctcgt
     5641 cttcgagatc aacgagggcg acgtgacggg cgtgcagcgc atcagcttcg tcggcaacga
     5701 gcatttcagc gacggcacgc tgcgcggcaa gatccgcacc agcgagagcg cctggtaccg
     5761 cttcctgtcg tcggacgacc gctacgaccc cgatcgcctc aatctcgacc gcgagctcct
     5821 gcgcaagttc tacctctccg agggctacgc cgatttccgc gtcgtctcgg cggtcgccga
     5881 gctggcgccc aaccgcgaag gcttcttcat caccatcact atcagcgagg gcgagcgcta
     5941 caagttcggc aaggtcgacg tctcgacccg cttccagggc ctggatgtcg acgttctgaa
     6001 gagtttcctg acgatgaacg aaggcgactg gtacgacgcc aacgcggtcg aaaagaccgt
     6061 ggcggcgctg tccgacatcg tcggctcgct cggctatgcc ttcgtcgatg tccgccccaa
     6121 catccggcgc aacaaggaca acctgaccat cgacgtgacc ttcgacatcc aggaagggcc
     6181 gcgtgtctat gtcgagcgca tcaacatctc gggcaacacg cgcaccctcg acaaggtgat
     6241 ccgccgcgaa ttccgcctcg ccgagggtga cgccttctcg accgccaagg tgcgacgcag
     6301 ccaggagcgg ctgcgcaatc tcggcttctt cgaaaaggtc gacgtttcgg cggctcccgg
     6361 atcggcgccc gacaagacca atctcgaagt ccaggtggtc gagcagagca ccggcgacat
     6421 ttccttcggt gccggctact cgacgacgtc gggcatcctg ggcgacatct cgctgaagga
     6481 gcgcaatctt ctgggcaagg gccaggagct gcgccttggc ttctcgatcg gtactttgag
     6541 caccctggtc gatctcagct tcaccgagcc ctatttcctc gatcgtccga tggcggcggg
     6601 cttcgacatc ttccggacct cgaacgatcg ccaggccgtc gcctcctaca acgacgccag
     6661 catcggcttc gcactgcgtg ccggctgggc ctacaccgag cacacccggc agaatgtccg
     6721 ctatactttg cgccagaccg acatctacaa tgtccagcct tttgcatcct ttgtcgtcca
     6781 ggcgaatgcc ggcacatcgg tggtctcgga agtctccgag acgatcgcct gggacacccg
     6841 cgacacgcgt ctcaacacga ccaagggcct gctgctgcgc aacacggtgg cggtggccgc
     6901 tgcgccgggc accgagcaat atcttcgcac caccgccgat gcggtgtact accagaccat
     6961 catcgaggat ttcgtggcgt cgatcggcgg ctcgatcggc gcggtcttcc cctacaacgg
     7021 ctcctcgttg cgcctgaaca acctgttctt catcggcggc gacaccttgc gcggcttccg
     7081 ggtcggcggc atcggcccgc gcgactcgaa caccaccgac tcgctgggcg gcacctactt
     7141 ctacactggc accaccgagc tcagctttcc ggtcggcctg cccaaggaga tcgggatcat
     7201 cggcaaggcg ttcgtcgatg tcggctcgct gtggggtctc ggcggtccgg cggcgaccag
     7261 cacctcggtc ctcaccagca acaccatgcg cgtcggcgct ggcgtcggcg tgcaatggat
     7321 atcgccattc ggcccaatcc gtatagacta tgccattccg gtcgttcagg acccttggga
     7381 caggaccgag aatatccgct tcagcttcgg cacgcgtttc tgaggatgtc gccgtcatga
     7441 acatccagac cgacagcacg agcctggcaa cgggaagcgc ggtggacatc aagcggatcc
     7501 tgcagatgat cccgcaccgc tatccgatgt tgatggtcga ccgcgtggtc gacatgcagc
     7561 tcgaccacag cgctgtcggc atcaagaatg tcagcatcaa cgaaccgttc ttccaaggcc
     7621 actttccgtc cgagccggtg atgccgggcg tgctgatcgt cgaggcgatg gcgcagaccg
     7681 ccgcggtgct ggtcgtcgcg accttcggcg ggcagtccga gggcaagctg gtctatttca
     7741 tgtcgatcga cggcgtgcgc ttccgccggc cggtggtgcc gggcgaccgc ctcgaattgc
     7801 acgtcgaaaa aatccagagc cgcggcaatg tctggaagtt ctccggcaag gccatggtcg
     7861 agggcaaggt cgcagccgaa gcgaccttcg ccgccatgat ccgcgacagg tagaggagac
     7921 ggaaatgccc gacaccgcag ccaattaccg catgctgcac accatgatcc gggtcaagga
     7981 tctcgacaag tcgctcgcct tctataccgg gccgatgggc atgaagctct tgcgcaagcg
     8041 cgacgtgccg gacggcaagt acagcctggc cttcgtcggc tacggcgacg agaaggagca
     8101 tgccgtcgtc gagctcacct acaactggga ccaggagaag ccctacgaca tcggcaccgg
     8161 cttcggccat ctcgccgtcg gcgtgcccga cgtccatggc ctctgcgagc agatcggcaa
     8221 ggccggcggc aaggtcacgc gcgcaccggg accggtgaag ttcggcacca cggtgatcgc
     8281 cttcgtcgag gatcccgacg gctacaagat cgagctgatc gaacggaagt agcggcgcct
     8341 gacgccggcc gctatcagat cagctgccag tt
//
LOCUS       DASWGA010000227         3445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_913599, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000227 DASWGA010000000
VERSION     DASWGA010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3445
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_913599"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1921)
                     /gene="addB"
                     /locus_tag="VF991_05490"
     CDS             complement(<1..1921)
                     /gene="addB"
                     /locus_tag="VF991_05490"
                     /inference="COORDINATES: protein motif:HMM:TIGR02786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000724 - double-strand break repair via
                     homologous recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="double-strand break repair protein AddB"
                     /protein_id="HEX9555926.1"
                     /translation="MKGVFTIGIDRRFADELARGVLAEHGGDPLAMADVLILVPTRRS
                     VRALREAFLRAADGKPTLLPRLAPLGDLDESEWEVAAGDACALALPPAIEPAEREALL
                     AQLVAAFIDNQGHPIAQSAAQALKLARELGRLLDELAIEGVSFSQLEGLVEGNFASHW
                     QRTLKFLAIVGEAWPKVLAERGQIDAIERRTQAIRAQAARWRDQPPATPVIAAGSTGS
                     QPATRELLAAIAQLPQGAVVLPGLDRDMDDASWRELGQSHPQFGLRELLSALGRERGD
                     VADWPGGGGSARPLLMSELMRPAETSEAWSRPPVSSLEHVTRADCATPHQEALVVALA
                     LRESLKDEGRTAALVTPDRALARRVAAELRRWNIDIDDSAGAPLADAPPAALLRALIG
                     AVDDGFAPVALLGLLKHPLCTLGGDRAALLDATRRLDRKCLRGLKPTSGMAAIHARIE
                     AAKFGDSADRRAVQSLIDRLEAATTDLAGLMESGAAPDALLDATVLAAERIASTEILW
                     AGDAGEALADALARLRAAWTGKEAIAGGEWPALFTAMLEPEIIRPTFGRHPRLAIWGP
                     LEARLQRADLLVLGGLNEGTWPPAVETGPWINRPMRTALGLPQPERRIGLSAHDFAAA
                     LGAERVLLTRAEREGG"
     gene            complement(1918..2622)
                     /locus_tag="VF991_05495"
     CDS             complement(1918..2622)
                     /locus_tag="VF991_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX9555927.1"
                     /translation="MKDTKIDTAMILAAGRGERLRPLTDTVPKPLIPVAGRSLLERSM
                     DRLIAHGVTNIVVNVHHLGQQIADRLKGRARIVHEERLLETGGSVKNALPLLGDGPFF
                     VLNGDGLWRDGRYPLLERLQFRWDPADMDALLLVHPIHKVIGRDEGERGDYFLEPGGL
                     LRHRGTAQLTPYLFASISVCDARLFRDSPEGPFSLLRLWNRAEAMKRLYGLINDGDWF
                     HVGTPWALAEAERVLA"
     gene            complement(2619..>3445)
                     /locus_tag="VF991_05500"
     CDS             complement(2619..>3445)
                     /locus_tag="VF991_05500"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEX9555928.1"
                     /translation="PFVRIGRHLSGLGFSAPAIHAVDDANGFLLLEDLGDDTFARVLQ
                     AGGDEGCLYGRATDVLVALHDAGERALLAGLGAYAGEALIDAAMLLPEWYLPAAAGRP
                     TPEEDTAAYRAAWRACLANLPAMPDTLLLRDYHKDNLVWLPARPGMKACGLLDFQDAQ
                     QGHCSYDLVSLIEDARRDVSPAVHAACLARYLGETGVDKNDFGTGFALMAAQRHARVI
                     GLFIRLLKRDGKPEYLPHLPRVWRLFERALQHEALEPLRAWVDRLLPPDLRRIGAP"
BASE COUNT          539 a         1188 c         1223 g          495 t
ORIGIN      
        1 cgccgccttc gcgctcggcg cgggtcagca gcacgcgctc tgcccccagc gccgcggcaa
       61 agtcgtgcgc cgacagaccg atgcggcgct ccggttgcgg caggccgagt gcggtgcgca
      121 tcggccggtt gatccagggg cccgtctcga cggccggcgg ccaggtgccc tcgttcagcc
      181 cgcccagtac cagaagatcg gcccgctgga ggcgcgcctc cagcggtccc cagatggcga
      241 ggcgcggatg gcggccgaag gtcgggcgaa tgatctcggg ctccagcatg gcggtgaaca
      301 gcgccggcca ttcgccgccg gctatcgcct ccttacccgt ccacgccgcg cgcaggcggg
      361 cgagggcatc ggccagcgct tccccggcat cgcctgccca caaaatttca gtcgacgcaa
      421 ttcgctctgc agcgagaacc gtcgcgtcga gcaaggcgtc gggcgcggca ccgctttcca
      481 tcagtccggc aaggtcggtt gttgcggcct cgagccggtc gatcaggctc tgcacggcgc
      541 ggcggtcggc agagtcgcca aacttggcag cttcgatccg ggcgtggatc gctgccatac
      601 ccgacgtcgg cttcagtccg cgcaggcatt tgcgatcgag gcgccgcgtc gcatccagca
      661 gtgccgcgcg gtcgccgccc aaggtgcaga gtggatgttt tagcaagccg agcagcgcga
      721 ccggcgcgaa gccgtcatcg actgcgccaa tcagcgcgcg caacagcgcg gccggcggcg
      781 cgtcggcaag cggcgcgccc gccgaatcgt cgatgtcgat gttccagcgc ctgagctccg
      841 cggcgacgcg gcgggcgagc gcgcggtcgg gcgtgaccaa ggcggcggtc cggccttcgt
      901 ctttcagcga ttcgcgcagc gccaaagcga cgaccagcgc ctcctgatgc ggggtcgcgc
      961 aatcggcgcg cgtcacatgc tccaaagacg agaccggcgg ccgcgaccac gcctcgctgg
     1021 tttccgccgg ccgcatcagc tcgctcatca ggagaggacg cgccgatccg ccgccgcccg
     1081 gccagtcggc aacgtcgcct cgttcgcggc ccagcgccga caaaagctca cgcagcccga
     1141 actgggggtg cgactggccg agctcgcgcc agctcgcgtc gtccatgtcg cgatccagcc
     1201 cgggcagcac gaccgcgccc tgcggcagct gggcgatggc ggccagcagc tcgcgcgtgg
     1261 cgggctgcga gccggtcgac ccggcggcga tcaccggtgt cgcgggcggt tggtcgcgcc
     1321 accgcgcagc ctgggcgcgg atcgcctggg ttcgccgctc gatggcgtcg atctggccgc
     1381 gttcggccag caccttgggc cacgcctcgc cgacgatggc gaggaatttt agcgtgcgct
     1441 gccagtggct ggcgaagttg ccctcgacca gaccctcgag ctggctgaac gacacgcctt
     1501 cgatggccag ctcatcgagc agtcggccaa gctcacgcgc gagcttcagc gcctgcgccg
     1561 ccgactgggc gatcggatgg ccctgattat cgatgaaggc cgcgaccagt tgcgccagca
     1621 gcgcctctcg ttcggcgggc tcgatggcgg gcggcagggc aagcgcgcag gcgtcgccgg
     1681 cggcgacctc ccattcgctt tcgtcgagat cgcccaacgg ggccagcctc ggcagcaagg
     1741 tcggtttgcc gtcggcggcc cgcagaaagg cctcccgcag cgcccgcacc gagcgccgcg
     1801 tcggcacgag gatcagcacg tcggccattg ccagcggatc gccgccgtgt tcggccagga
     1861 cgccacgggc cagctcgtcg gcgaaacggc ggtcgatgcc gatggtgaat acgcctttca
     1921 tgccaatacg cgctcggcct cggccagcgc ccacggcgtg ccgacatgga accagtcgcc
     1981 gtcgttaatg agcccgtaca gccgcttcat cgcctcggcg cggttccata gcctcagaag
     2041 cgagaacggc ccttcgggcg agtcccggaa caggcgcgca tcgcagaccg agatgctggc
     2101 gaagagatag ggggtgagct gtgccgtccc gcgatggcgc agaaggccgc cgggctcgag
     2161 aaaataatcg ccacgttcgc cctcgtcgcg gccgatgacc ttgtggatgg gatggaccag
     2221 cagcaaggcg tccatgtccg ccggatccca tcggaattgc aggcgctcca ggagggggta
     2281 ccgcccatcg cgccataaac cgtcgccgtt cagcacgaaa aagggaccat cgcccagaag
     2341 aggcagcgcg ttcttcacgc tgccgccggt ctccagcaag cgctcctcgt gcacgatgcg
     2401 cgcgcggcct ttcagacggt cggcgatctg ctggccgaga tggtggacgt tcaccacgat
     2461 attggtgacc ccatgcgcga tcaggcgatc catcgagcgt tctagcaggg agcggccggc
     2521 cacggggatg agcggcttgg ggacggtgtc ggtcaaaggg cgcagacgct cgccgcggcc
     2581 ggccgccaag atcatggcgg tgtcgatctt ggtgtccttc atggcgcccc gatccgacgc
     2641 aagtctggcg gcagcaggcg gtcgacccag gcgcgcaacg gttccagcgc ctcgtgctgg
     2701 agcgcgcgtt cgaacaggcg ccagacgcgc ggcagatgcg gcaggtattc gggcttgccg
     2761 tcgcgcttca agagccggat gaacaacccg atgacgcggg cgtggcgctg cgccgccatc
     2821 agggcgaagc cggtgccgaa gtcgttcttg tcgacgccgg tttcgccaag gtagcgggcc
     2881 aggcaggcgg cgtggacggc aggcgatacg tcacggcgcg cgtcctcgat cagcgagacg
     2941 agatcgtacg agcagtggcc ctgctgggca tcctggaagt cgagcagacc gcaggccttc
     3001 atgccgggcc gcgccggcag ccacaccaga ttgtccttgt ggtagtcgcg caggagcagc
     3061 gtgtcgggca tcgccggcag gttggcgagg caggcgcgcc acgccgcgcg ataggcggcg
     3121 gtatcttctt cgggggtcgg ccggccggcg gcggcgggca gataccattc cggcagcagc
     3181 attgccgcat cgatcagggc ctcgccggca taggcgccga gaccggccag cagggcgcgt
     3241 tcgccggcgt catgcagggc caccagcacg tcggtcgccc ggccatagag gcagccttcg
     3301 tcgccgccgg cttgcagcac gcgtgcgaag gtgtcgtcac ccagatcctc cagcagaagg
     3361 aatccgttgg cgtcatcgac ggcgtggatc gccggtgcgc tgaagccgag cccgctgagg
     3421 tggcggccga tgcgcacgaa agggc
//
LOCUS       DASWGA010000228         9797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_913732, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000228 DASWGA010000000
VERSION     DASWGA010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9797
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_913732"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VF991_05505"
     CDS             complement(<1..183)
                     /locus_tag="VF991_05505"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9555929.1"
                     /translation="MRVFTEVPPADWRSVGPAAEAAEAAGFDALMTVELGHDVLAPLA
                     FAAVATERVELTPSIAV"
     gene            complement(223..1752)
                     /locus_tag="VF991_05510"
     CDS             complement(223..1752)
                     /locus_tag="VF991_05510"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9555930.1"
                     /translation="MASRQAVLGMEQASFYYGSSRVFRGVSFLLDDARTALVGENGAG
                     KSTLLKCLTGALELNGGKVVRSRGLRIGSVPQDVPQGLAGRPVRDVLHDSLAKVGLDE
                     DYWRIDVLMDEIGVEAATLDCSFGTLSGGWQRLLLIAAAARLEEPEILVLDEPTNHLD
                     LTNINTLERWLTVEFAVPMLIVSHDREFLDRVTQRTLFLRSDGMHAFKTRFSQAREEL
                     LRRDAAAAARARLEDKEIRRLEQAAARYKVWAVKNPDLNKRKNAVETRIARIEKDRTQ
                     TYVARERRLELSDGDIDARVALRIAGLDVRAPGANAKLIAIDRLTIAAGDRVAILGGN
                     SAGKSTLLSTLAAAFDPEREHYDGKAPVRFNPACRLVYFDQAMRDLPLETSILDYVVQ
                     AEGVGEKDAIRFLAGAGFAFARIGEPIGVLSHGERARLVFLKMKLLRPNMYLLDEPTN
                     HLDIEGQEDLEAQLEKHDVSCLFVSHDRYFTRTVATRFLEIRKGGLVEIDDAEGFFDA
                     S"
     gene            complement(1768..2949)
                     /locus_tag="VF991_05515"
     CDS             complement(1768..2949)
                     /locus_tag="VF991_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9555931.1"
                     /translation="MLLANATLPDGSKRDIEVLGGRIAALIPASGQALPNDALDLKGA
                     LVLPPLVDGHIHLDKTLLGLPWVPNQASGNRVADRIEAEHRVRAARTVPEAETGANLV
                     RQVLASGTLHMRSHVDIDNQLGLRNLHEILKVRERFRDLVSIQIVAFPQSGILRSPGT
                     AELLDAAIAEGADLLGGLDPVGIDGDLDGHLDAVFGIAERRGVGVDIHLHDSGEDGIV
                     QLRAIALRTERAGLQGRVAVSHAFALGSVPTDVAEHTADFLAEAGVAIMSHGPGGAVI
                     PPLKLLHEHGVEVFGGSDNIRDAWSPFGNGDMLERATLIAYRANFRHDEELALAFDMV
                     AGAAARVLGLASYGIAVGGPADFVVVDAGSVAEAVATRPRRKLVIKGGRIVAKDGVLV
                     P"
     gene            complement(2954..3739)
                     /locus_tag="VF991_05520"
     CDS             complement(2954..3739)
                     /locus_tag="VF991_05520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX9555932.1"
                     /translation="MSTNMLKKRLKEGKACVNGWLAIPSGFSAETMAQCGWDSVTVDM
                     QHGVQDYHSMVTCFQAMDKHPVTPLVRVPWNEPGIIGKVLDGGAWGVICPMVNNVAEA
                     KALVSYSLYPPKGKRSNGPIRAGAYGAATPYQATANDEVLVIPMIETQEAIDNIDAIL
                     DVPGISGIYIGPSDLGLSLGLVPKLDRDEPQILAIYDKLLAAIKKRNLFAGIHNGTAG
                     YAAKMIGKGFRFVTIANDSGLMAMAARAAVAQTRKEAGAVADK"
     gene            complement(3842..4729)
                     /locus_tag="VF991_05525"
     CDS             complement(3842..4729)
                     /locus_tag="VF991_05525"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9555933.1"
                     /translation="MRTKSPTTRLLLHVANLAVIFFILLPVAAVFIGSIQSEKALQAD
                     TRRLLPLEFTLDNFTVILSKGEQKGRIFEQVTYLPDNIKSFYTAFSNSAIVAISVTFL
                     TLLFGSLSAYTIARQRFRWTLFLLQANIVARFVPVIVLMIPLYVVMRSLGQLNSLGGV
                     IIAETGFLLPYAILILAPYFDTIPTELEEAARIDGCTRLGAFVSIVLPLATPALAACG
                     VIIFIISWHELLIPLILNARPDFMTLPVVIASLVGDVHVFFNLMMAICLLALAPTVIL
                     VALLQKYIVEGLAAGAVKG"
     gene            complement(4729..5634)
                     /locus_tag="VF991_05530"
     CDS             complement(4729..5634)
                     /locus_tag="VF991_05530"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9555934.1"
                     /translation="MPWLRREMRASHFAFFMNLPTLLCLGLVLAYPIAYAAYLSVHRV
                     GLAQLRRGEFPFNGWENYGRVLEDPLFWVALKNTLVFTFITVSSEIVLAVLIALLINQ
                     SSIWTSRVTRFLILLPYAIPPIANGLIWAFLYSFQFGFLNRILFTAGLIDNPINWAGN
                     PDTALYAVTVPYVWRTLPFAIILVHAALQGIPRELYEQSAIDGANAWHRFWHITLPML
                     RQIIAIILILRTAFAFAVFEEILAITQGGPGDATWVAAWYSYKITFAPPNNFGMGSAS
                     AYILALMIGAIALVYMRFVYRRVTL"
     gene            complement(5684..7042)
                     /locus_tag="VF991_05535"
     CDS             complement(5684..7042)
                     /locus_tag="VF991_05535"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9555935.1"
                     /translation="MSDDLIGKWELSRRRVLGTAAGLGLAGLSGAAFGQQSGPWSVAP
                     KSKVDRLNFVVWTYGDIYTRIAKQFETDWGVKVDSTISSFNDHPTKLATMFAAGEKID
                     VSQSSPFSFPNFVNQGLAEPIDDLPGAADYIKDFTPFTKQVATIKGKTMGLPYFSAVW
                     VWNYYADMLEKLKIEKPFASYDEFIEHCVKAKKDGVSRYPILWIAGVGLEQLPGTWYQ
                     MTWNKGGAFFDKQGNHMLGAGSVARETLKWWANTFEKGLDIADPESLKVQFTSGAKAF
                     GAGKNLYRGPNHHYGLNICNDPAQSPIAGKVKVHGSPGEGKTIGVTHVYFLSSANRDK
                     EWAWKLLQYLGGRTKDGNYTQAVSLAKDAMLGSGYNSVMNSDAVKLGWAPWGDVPAIL
                     KIWDQAAYIGEACSSAYQPWHFPWTDQLNIEVQKCLTGQITADQCCDNLIKGIADAKR
                     KV"
     gene            7168..8025
                     /locus_tag="VF991_05540"
     CDS             7168..8025
                     /locus_tag="VF991_05540"
                     /inference="COORDINATES: protein motif:HMM:NF013431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HEX9555936.1"
                     /translation="MRLLSLRAGRLGLDLAPQAGGAIARFTADGSIDLLRPTPPQAIA
                     SGRGNESSCYPLVPFSGRIANGRLVFDGTEIVLKPNWPGVRHPMHGDGWARPWTVTRS
                     DGQSADIVYEHDGREGWPFRYRARQTYRLQGDALTVAMSIENLESRVVPAGLGLHPFF
                     VRDADTELACRAQYVWRTDAEVLPIERIAVPPPWDFSTSRRVDDITVDSGFERWDGRA
                     TIRWPRTGLRLEMTATEPFRDIVIYIPPNRPYFCAEPVSHVPGTIGSTRLAAGATLAG
                     EIALHLSNL"
     gene            8033..8800
                     /locus_tag="VF991_05545"
     CDS             8033..8800
                     /locus_tag="VF991_05545"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019856748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9555937.1"
                     /translation="MSPFASYPSLKDRAVFVSGGGSGIGAAIVEHFAEQGAKVGFVDI
                     DEAASKALGARIAAAGHPAPLFAKSDVRDIAAYQGVIADMAGRLGPFTVLVNNAARDD
                     RHAIEDVTPAFWDERIAVNLRHQYFAIQSIVPGMKKAGGGSIINFSSVSYHAMTPKLS
                     VYQAAKAAVIGMTRGLARDFGPDKIRLNSITPGWIMTQRQIDLWLTPEAEAGLMQAQC
                     LKEKLYPPDIARMVLWLAADDSRLVTAQNFIVDGGRT"
     gene            8797..9477
                     /locus_tag="VF991_05550"
     CDS             8797..9477
                     /locus_tag="VF991_05550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555938.1"
                     /translation="MSAATTRFLPRAGRFVASVFEHIVPPMLYFLVAFNLIVFTTNLM
                     VHDYWFDASTFLVATTTALVVGKAVLVANEIKLIDRFRGAPLIQPILYKTVFYTLIVL
                     VVRAAERFIHLAFDTDGFGPAFQEAVASFSWRRFAAIQIWLFTCFLIYVTATELSALL
                     GEGQMFRLFFRHRSSQHRLTRRQHVRALLELSRLAETTPREKLLDPTTPQGSRLVAIV
                     DALRRRPA"
     gene            9486..>9797
                     /locus_tag="VF991_05555"
     CDS             9486..>9797
                     /locus_tag="VF991_05555"
                     /inference="COORDINATES: protein motif:HMM:NF023580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3592 domain-containing protein"
                     /protein_id="HEX9555939.1"
                     /translation="MAVDRSWRWIAWLVLGIGALILAGGLALGWGSLRHVLYAERADG
                     EISEIRRQGDMYAPVVRFRLPDGETQEVTDLASGAPDFAVGDKVTILYMPQDPADFRI
                     DT"
BASE COUNT         1644 a         3164 c         3272 g         1717 t
ORIGIN      
        1 aaccgcgatc gagggcgtga gctcgacccg ctcggtggcg acggctgcga aggcgagcgg
       61 cgccagcacg tcatggccga gctcgaccgt catcagcgca tcgaagcccg ccgcctcggc
      121 ggcctcggcc gccggcccca cgctccgcca gtcggccggc ggcacctccg tgaacacgcg
      181 cacgacatcc tcccgtttca atttggccga gagtatcgca agtcagctgg cgtcgaagaa
      241 gccttcagcg tcgtcgattt cgaccagtcc tcccttgcgg atctccagga accgcgtagc
      301 gacagtgcgg gtgaagtagc ggtcgtgcga cacgaacagg caggacacgt cgtgcttctc
      361 gagctgcgcc tcgaggtctt cctggccttc gatgtcgaga tggttggtcg gctcgtcgag
      421 caggtacatg ttcggccgca ggagcttcat cttcagaaag accaggcgcg cacgctcgcc
      481 gtggctcagc acgccgatcg gctcgccaat gcgggcgaag gcgaagcccg ctcccgcaag
      541 aaagcggatg gcgtccttct cgccgacgcc ctcggcctgc acgacgtagt cgaggatcga
      601 cgtctcgagg ggcaggtcgc gcatagcctg gtcgaaatag accagacggc aggccggatt
      661 gaagcgcacc ggcgcctttc catcatagtg ctcgcgctcg gggtcgaagg ccgctgcgag
      721 cgttgaaagc agggtcgact tgccggcgct gttgcctccc aggatggcga cgcggtcgcc
      781 ggcggcgatc gtcaaccggt cgatggcgat cagcttggcg ttggcgccgg gcgccctgac
      841 gtccagaccg gcgatgcgca gtgccacgcg cgcatcgatg tcgccgtcgc tgagctccag
      901 ccgccgctcg cgcgccacat aggtctgcgt gcggtccttc tcgatgcggg cgattcgcgt
      961 ctcgacggcg ttcttgcgct tgttgaggtc ggggttcttg accgcccaga ccttgtagcg
     1021 cgctgccgcc tgctccagcc ggcggatctc cttgtcctcc agccgcgccc gggcggctgc
     1081 cgcggcgtcg cggcgcaaaa gctcctcccg cgcctggctg aagcgcgtct tgaaggcgtg
     1141 catgccgtcg ctgcgcagga acagggtacg ctgggtcacg cggtccaaaa attcccggtc
     1201 gtggctcacg atcagcatcg gcaccgcgaa ctcgacggtg agccagcgtt cgagcgtgtt
     1261 gatgttggtg aggtcgaggt gattggtcgg ctcgtcgagg accaggatct cgggctcttc
     1321 tagtcgcgcc gcggccgcga tcagcagcag ccgctgccag ccgcctgaca gcgtgccgaa
     1381 ggagcagtcg agggttgccg cctcgacgcc gatctcgtcc atcagcacgt cgatgcgcca
     1441 gtaatcctcg tcgagcccga ccttggcgag ggaatcatgc aggacatcgc gcaccggccg
     1501 cccggccagc ccttgcggca cgtcctgggg cacgctgccg atccggagcc cgcgcgagcg
     1561 gactaccttt ccgccattca gctcgagtgc gccggtcagg catttcagca gcgtggattt
     1621 gcccgcgccg ttctcgccga ccagcgctgt gcgggcgtcg tcgaggagaa acgacacgcc
     1681 gcggaaaacg cggctcgagc cgtaatagaa gctggcctgc tccatgccga gcacggcctg
     1741 acgcgacgcc attgtcgatc cccagattca ggggaccagt acgccatcct tggcgacaat
     1801 gcgaccgcct ttgatcacca gtttgcgcct ggggcgcgtg gcgacagctt cggccaccga
     1861 tccggcatcg accacgacga aatcggccgg ccccccgacc gcgatgccgt aggaggcgag
     1921 gcccagcacg cgcgccgccg cccccgccac catgtcgaag gccagcgcca gctcctcatc
     1981 gtgtcggaag ttggcgcgat aggcgatcag cgtggcgcgc tccagcatgt cgccgttgcc
     2041 gaacggcgac caggcatcgc ggatattgtc ggagccgccg aacacctcca cgccatgctc
     2101 gtgcaggagt ttcagcggcg ggatcaccgc accgccgggt ccatgactca tgatcgcgac
     2161 gccggcctcg gcaaggaaat ctgcggtgtg ttcggcgaca tcggtgggca ccgaacccag
     2221 cgcgaaggcg tggctcacgg cgacgcggcc ctgcaggccg gccctctccg tccgtagcgc
     2281 gatggcccgc aactggacga tcccgtcctc gccgctgtcg tgcaggtgga tgtcgacacc
     2341 cacgccgcgg cgctcggcga tgccgaagac cgcatcgaga tggccgtcca agtcgccgtc
     2401 gatgcccacc ggatcgaggc cgcccaacag gtcggcgccc tcggcgatgg cggcgtccaa
     2461 cagctcggcg gtgcccggcg aacgcaggat gccgctttgc gggaaggcga cgatctggat
     2521 gctcacgaga tcgcggaagc gctcgcgcac cttcaggatc tcatggagat tgcgtagccc
     2581 gagctggttg tcgatgtcga catggctgcg catgtgtagc gtaccgctcg ccagcacctg
     2641 gcgcaccagg ttggcgccgg tctcggcctc cggcaccgtc cgcgctgccc gtaccctgtg
     2701 ttcggcctcg atgcggtcgg ccacgcggtt gcccgacgcc tggttgggca cccagggcag
     2761 gccgagcagc gtcttgtcga gatggatatg gccgtcgacc agcggcggca ggaccagcgc
     2821 gcctttcagg tcgagggcat cgttgggtag tgcctggccc gaggcgggaa taagggcggc
     2881 gatgcgccct cccaaaacct cgatgtcgcg cttgctgccg tcgggcagcg tggcgttggc
     2941 taaaagcacg ccattacttg tcggcgaccg cgccggcttc cttgcgggtc tgggcgaccg
     3001 ccgcgcgcgc cgccatggcc atcaggcccg agtcgttggc gatggtgacg aagcggaagc
     3061 ccttgccgat catcttggcg gcgtagcccg cggtgccgtt gtggatgccg gcgaacaggt
     3121 tgcgtttctt gatggcggcc agaagcttgt cgtagatcgc caggatctgc ggctcgtcac
     3181 ggtcgagctt gggcaccagg ccgagcgaca ggccgagatc actgggcccg atatagatgc
     3241 cgctgatgcc cggcacgtcg aggatggcgt cgatattgtc gatcgcctcc tgcgtctcga
     3301 tcatcgggat gaccagcacc tcgtcattgg cggtcgcctg gtagggagtc gccgcgccat
     3361 aggcgccggc gcggatcggg ccgttgctgc gcttgccctt gggcggatag agcgaatagg
     3421 agaccagcgc cttggcctcg gcgacgttat tgaccatcgg gcagatcacg ccccaggcgc
     3481 cgccgtccaa aaccttgccg atgatgccag gctcgttcca cggcacgcgc acgagcggcg
     3541 tcaccgggtg tttgtccatc gcctggaagc aggtgaccat cgaatggtag tcctgcacgc
     3601 cgtgctgcat gtcgacggtg acgctgtccc agccgcattg cgccatggtc tcggccgaga
     3661 agccgctggg gatcgcgagc cagccgttga cgcaggcctt gccctccttc aggcgctttt
     3721 tcagcatgtt cgtcgacata tcggcgttcc ccttttttcg acgtcgttga gaaggccgga
     3781 tcataggcgc cgggacggcc ggaaggccat ggcggtttgt cgctgtgcgg acggttttgg
     3841 ctcagccctt tacggcgccg gccgccagcc cctcgacgat gtatttctgc agcagcgcga
     3901 ccaggatcac ggtgggcgcg agcgccagca ggcagatcgc catcatcaga ttgaagaaga
     3961 cgtggacgtc gcccaccagg ctcgcgatca ccaccggcag ggtcatgaaa tccggccggg
     4021 cgttcaggat cagcgggatc aggagctcgt gccaggaaat gatgaaaatg atgacgccgc
     4081 acgccgccag cgccggcgtc gccagcggga gcacgatgct cacgaaggcg ccgagccgcg
     4141 tacagccatc gatgcgcgcg gcttcctcga gttcggtcgg gatggtgtcg aaatagggcg
     4201 ccaggatcag gatggcatag ggcaggagaa atccggtttc cgcgatgatg acgccgccca
     4261 gcgaattgag ctggccgagc gatcgcatga cgacgtagag cgggatcatc aggacgatca
     4321 ccggcacgaa gcgcgcgacg atgttggcct gcagcaggaa cagggtccag cggaagcgct
     4381 ggcgggcgat ggtgtaggcc gacagcgagc cgaacagcag ggtcaggaag gtgaccgaga
     4441 tcgccacgat cgccgagttc gagaatgccg tatagaagct cttgatgttg tcgggcaggt
     4501 aggtgacctg ctcgaagatg cggcccttct gctcgccctt gctgaggatg acagtgaaat
     4561 tgtcgagggt gaattcgagc ggcagcaggc ggcgcgtatc ggcctgcagc gccttctccg
     4621 actggatgct gccgatgaac accgccgcca ccggcagcag gatgaagaag atcaccgcga
     4681 ggttggcgac gtgaagcagc agcctcgtgg tgggcgactt ggtgcgcatc acagcgtcac
     4741 ccgccggtag acaaagcgca tgtagaccag tgcgatggcg ccgatcatga gggcgagaat
     4801 gtaggccgac gccgagccca tgccgaaatt gttgggcggc gcgaaggtga tcttgtagct
     4861 gtaccaggcc gcgacccagg tggcgtcgcc cggtccgccc tgggtgatgg cgaggatctc
     4921 ctcgaacacg gcgaaggcaa aagcggtgcg caggatcagg atgatggcga tgatctggcg
     4981 cagcatcggc agggtgatgt gccagaagcg gtgccaggca ttggcgccgt cgatggcgga
     5041 ctgctcgtag agctcgcgcg ggatgccctg cagggcggcg tgcaccagga tgatggcgaa
     5101 gggcagcgtg cgccagacat agggaacggt gacggcgtag agcgccgtgt cgggattgcc
     5161 cgcccagttg atcggattgt ctatgaggcc cgccgtgaac aggatcctgt tcaagaagcc
     5221 gaactgaaag ctgtagagga acgcccagat caggccgttg gcgatcggcg ggatggcgta
     5281 gggcagcagg atcagaaagc gggtgacccg cgaggtccag atgctcgact ggttgatgag
     5341 cagcgcaatc agcaccgcca gcacgatctc gctgctgacg gtgatgaaag tgaagaccag
     5401 cgtgttcttc agcgcgaccc agaacagcgg gtcctcgagc acgcggccgt aattctccca
     5461 gccgttgaag gggaactcgc cgcgccgcaa ctgggcgagt cccacgcgat gcaccgaaag
     5521 ataggccgcg taggcgatcg gataggccag caccagaccg aggcagagca gcgtcggcag
     5581 gttcatgaag aaggcgaaat gcgacgcccg catctcgcgg cgcagccacg gcacaggcct
     5641 gcgccgcgcg acgacgattt cctgcgcctg agtgatcagg gcgtcagacc ttgcgcttgg
     5701 cgtcggcgat gcccttgatc aggttgtcgc agcattggtc ggcggtgatc tggccggtca
     5761 ggcatttctg gacctcgatg ttgagctgat cggtccacgg gaaatgccag ggctgatacg
     5821 ccgaggaaca ggcttcgccg atgtaggcgg cctggtccca gatcttgagg atagcgggaa
     5881 cgtcgcccca cggcgcccag ccgagcttca ccgcgtcgct gttcatcacc gaattgtagc
     5941 ccgagcccag catggcatcc ttggccaggc tgacggcctg cgtgtagttg ccgtccttgg
     6001 tgcggccgcc gagatactgc agcagcttcc acgcccattc cttgtcgcgg ttcgccgaag
     6061 acaggaagta gacgtgggtg acgccgatcg tcttgccctc gcccggcgag ccatggacct
     6121 tgaccttgcc ggcgatcgga gactgcgccg gatcgttgca gatattgagg ccgtagtgat
     6181 ggttcggtcc gcgataaagg ttcttgccgg cgccgaacgc cttggccccg ctggtgaact
     6241 ggaccttgag cgattcggga tcggcgatgt cgaggccctt ctcgaaggtg ttggcccacc
     6301 atttcagcgt ctcgcgcgcg accgagccgg cacccagcat atggttgccc tgcttgtcga
     6361 agaaggcgcc gcccttgttc caggtcatct ggtaccaggt gcccggcaac tgctcgaggc
     6421 cgacgccggc gatccacagg atgggatagc gcgacacgcc gtccttcttg gccttgacgc
     6481 agtgttcgat gaattcgtcg tagctggcga acggcttctc gatcttgagc ttttccagca
     6541 tgtcggcgta gtagttccac acccacactg cggagaagta gggcaggccc atggtcttgc
     6601 ccttgatggt cgccacctgc ttggtgaagg gcgtgaaatc cttgatgtag tcggcggcgc
     6661 ccggcaggtc gtcgatcggt tcggccagtc cctggttgac gaagttgggg aaggagaacg
     6721 gcgaggactg cgagacgtcg atcttctcgc cggcggcgaa catggtggcg agcttggtcg
     6781 ggtgatcgtt gaacgaggag atcgtcgaat cgaccttgac gccccaatcg gtttcgaact
     6841 gcttggcgat tcgggtgtag atgtcgccgt aggtccagac gacgaagttg aggcggtcga
     6901 ccttgctttt cggcgccacg ctccaagggc cgctctgctg accaaaggcg gcgcccgaca
     6961 gtccggccag gccaagaccg gcggccgtgc cgagaacgcg acgcctgctc aactcccatt
     7021 tgccgataag atcgtcactc atgtcgcgct cccgcttgcc caggtgatga tcaagcctat
     7081 caccacccct cggctggatg tagcgatgat cgggcaaaaa gcaggccatg gtggattacg
     7141 ggcgcggatg cgggtagagg cgctggcatg aggcttttgt ctttgcgcgc cggccggctt
     7201 ggtctggatc tcgctccgca ggccggcggg gcgatcgccc gcttcacggc cgatggttcc
     7261 atcgacctgc tgcggccgac gccgccgcag gccatcgcct cgggccgggg caatgaatcg
     7321 tcgtgctatc cgctggtgcc gttttccggc cgcatcgcca acggccgtct cgttttcgat
     7381 ggcaccgaga tcgtgctgaa acccaactgg cccggggtgc gccatcccat gcacggcgac
     7441 ggttgggcac ggccgtggac agtgacgcga agcgacgggc agtccgccga catcgtctac
     7501 gaacatgacg gccgcgaggg ctggcccttc cgctaccgcg cccgtcagac ctatcgcctg
     7561 cagggcgatg cgctcaccgt cgccatgagc atcgagaacc tggaaagccg ggtcgtgccg
     7621 gccgggctgg ggttgcatcc gttcttcgtg cgcgacgccg ataccgagct cgcctgtcgc
     7681 gcacagtatg tctggcggac cgacgccgag gtgctgccga tcgaacgcat cgccgtgccg
     7741 ccgccgtggg atttctcgac ctcgcgacgt gtcgacgaca tcacggtcga cagcggcttc
     7801 gagcgctggg acggccgcgc cacgatccgc tggccgcgca ccgggctccg cctcgagatg
     7861 acagcgaccg aaccgtttcg cgatatcgtc atctacatac cgcccaaccg cccctatttc
     7921 tgtgccgagc cggtgagtca cgtccccggc accatcggtt ccacccgtct cgccgccggg
     7981 gcgacgctgg ccggcgagat cgccctccat ctctccaacc tgtaggcccg tcatgtcacc
     8041 ctttgcttcc taccccagcc tgaaagatcg tgccgtcttc gtgtcgggcg gcggctcggg
     8101 catcggcgct gccatcgtcg agcatttcgc cgaacagggc gccaaggtgg gcttcgtcga
     8161 catcgacgaa gccgcgtcca aggcgctcgg cgccaggatc gcggcggccg gccatcccgc
     8221 tcccctgttc gccaagagcg atgtgcgcga catcgccgcc tatcagggcg tgatcgctga
     8281 catggcgggc cggttgggac ctttcaccgt gctggtcaac aacgccgcgc gcgacgatcg
     8341 ccacgcgatc gaggacgtga ccccggcttt ctgggacgag cgcatcgcag tcaatctgcg
     8401 gcaccagtat tttgccatcc agtccatcgt gccgggcatg aagaaggcgg gcggaggctc
     8461 gatcatcaat ttcagttcgg tgagctatca cgccatgacg cccaagctgt cggtctacca
     8521 ggcggccaag gcggcggtga tcggcatgac gcggggccta gcccgcgatt tcgggcccga
     8581 caagatccgg ctgaactcga tcacgccggg ctggatcatg acccagcgcc agatcgatct
     8641 ctggctgacg cccgaggccg aggccggcct gatgcaggcg caatgtctca aggagaagct
     8701 ctatccgccc gatatcgcgc gcatggtgct atggctggcg gccgacgaca gccggctggt
     8761 gacggcgcag aacttcatcg tcgacggagg ccggacttga gcgcggccac aacgcggttc
     8821 ctgccgcggg ccggccgctt cgtcgcgtcg gtgttcgagc acatcgtgcc gccgatgctc
     8881 tacttcctgg tcgccttcaa cctgatcgtc ttcacgacca acctgatggt ccacgactat
     8941 tggttcgatg cgtcgacctt cctggtcgcc accacgacag cgctggtggt gggcaaggcc
     9001 gtgctggtgg cgaacgagat caagttgatc gatcgctttc gcggcgcgcc gctcattcaa
     9061 ccgattctct acaagaccgt gttctacacg ctgatcgtgc tggtcgtccg cgcggccgag
     9121 cgtttcatcc atctcgcctt cgataccgac ggatttggtc cggccttcca ggaggcagtc
     9181 gcttcctttt cctggcggcg ctttgcggcg atccagatct ggctcttcac ctgtttcctg
     9241 atctacgtca cggcaaccga gctcagcgcg ctcctgggcg agggccagat gttccgcctg
     9301 ttcttccgcc accgctccag ccagcatcgc ctgacccgcc gccagcatgt gcgggcgctg
     9361 ctggagctca gccggctcgc cgagacgacg ccgcgcgaga agctgctcga tcccacgacg
     9421 ccacagggca gccggctggt cgccatcgtc gacgccctgc gtcggcgtcc cgcctgaagg
     9481 caagcatggc cgtcgaccga agctggcgct ggattgcctg gctggtcctc ggcatcggcg
     9541 cgctgatcct ggccggcggc ctggcgctgg gctggggcag cctgcgtcac gtcctctatg
     9601 ccgagcgtgc cgatggcgag atcagcgaga tccgccgcca gggcgacatg tacgcgcccg
     9661 tggtgcgctt tcgtcttccc gatggcgaga cgcaggaggt gaccgacctc gcaagcggcg
     9721 cgcccgactt cgccgtgggc gacaaggtca cgatcctcta catgccgcag gatcccgccg
     9781 acttccgcat cgacacc
//
LOCUS       DASWGA010000229         7677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1167489, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000229 DASWGA010000000
VERSION     DASWGA010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7677
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1167489"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..199)
                     /locus_tag="VF991_05560"
     CDS             complement(56..199)
                     /locus_tag="VF991_05560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555940.1"
                     /translation="MAETEPIALIVGVACSLVALVLAWRAYRGASAEDERRKREKEER
                     DRR"
     gene            complement(192..1169)
                     /locus_tag="VF991_05565"
     CDS             complement(192..1169)
                     /locus_tag="VF991_05565"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9555941.1"
                     /translation="MSLDLPPFRPRFPWWGRDLQTIANRLRGVSRSLAPHASERLAFA
                     LPDGTGDMLLASLDRPATPKQGTPLVILIHGLTGAEDSLYILSMARLMLDRGWRVLRL
                     NLRGAGPSRSLCGQHYYAGRSQDFRALLSVLPAELTGDGMVAVGYSLGGAMLLKYLGE
                     EGAAAPLAAAATVSAPIDLAATCRYMMRRRNKAYHRYILGLMKVEATAEGAVVSAAER
                     AAIMGARSIWDYDDAFIAPRYGFGRAEDYYDRCRPTRFMAGIRVPTLAVAALDDPWIP
                     GALYRSYDWTSNRSLAPLLPERGGHVGFHGTVSRQPWSDLAVARFFDHG"
     gene            complement(1310..2314)
                     /locus_tag="VF991_05570"
     CDS             complement(1310..2314)
                     /locus_tag="VF991_05570"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9555942.1"
                     /translation="MPPSIDSLESLDLPPFRPRFPWWSADLQTIAVLLGTYESDLSPH
                     KSERVCFCMADRSGDILVGMLDRPAEPQAGRPLVILVHGLTGCENSAYILNAARHILD
                     HGYSVLRVNLRGCGASRPYCREHYHIGRTADFRRVLWQLPDDLTDNGIVAVGYSMGGA
                     MLLKYLGEEGSFSPLRAAASICAPVDLIRTCQHMMRPRNWLYHNYILNDLKKQALAEA
                     ASISPEEREIVRNARSMFEYDDRFISPRYGFRGADDYYGLCTPLTYMPEIRVPTMVLA
                     AGDDPWIPAEYYRDYNWADNPWLLPVMAEGGGHLGFHCDLSEQPWCDLALEKFLERIC
                     "
     gene            2344..3219
                     /locus_tag="VF991_05575"
     CDS             2344..3219
                     /locus_tag="VF991_05575"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9555943.1"
                     /translation="MTTLSGSPGSAALGVLYAVGAAAVFSTAGVIVRRIELPAWDISF
                     WRSALLVATMLPLLFWQRRGLLIDVRNAGPALLLSALLLAGSFVAFILALGLAPVANV
                     LLMFGATPFITALLARLFLGEPLHGHTILAMAAAVLGLAISVAGSLQAGALAGMAVAL
                     IVVLCMSGNYVVVRHRRDIGMAPAIWLAGVISGLAALPFAHPGNVTWSQVPWLLALSP
                     GQLAGGLLLYMASLKRIPAGRAALLGLLELVLGPLWVWLFDGEKPDDLTLLGGAIVIG
                     AAAANVWLDSRRTTG"
     gene            3229..4401
                     /locus_tag="VF991_05580"
     CDS             3229..4401
                     /locus_tag="VF991_05580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX9555944.1"
                     /translation="MTQNAQSGSTGGPLSGIVVVDLSRILAGPYCTLLMAEMGARVIK
                     VEPPKGGDDARAYGPFVKGKSTYFASVNRGKESIALDLKADADRKIFEKLLHKADVIV
                     ENFRPGTMEKLGYGWDTLHKKYPRLIYASASGFGHSGPNSKDPAYDMVVQGMGGIMSI
                     TGNEGQPPARVGMSIGDIGAGLFTAVAVNAALVHRLKTGESTKIDIGMFDCQLALLEN
                     AIMRYTVEGEIPGPLGARHPTITPFQAFRTSDGAIIIAAGNDGLFIKTCEALGRADMA
                     SDPNYKTNALRQKHHGTLEREIEAVLQRNTTAHWIAILSKAGIPCGPINNIKQALEHP
                     QVAARNMLVEVPDGSGGTLRLAGNPLKMSAFADPKTRAPAPDLDSDREAILSYLGG"
     gene            4654..7089
                     /locus_tag="VF991_05585"
     CDS             4654..7089
                     /locus_tag="VF991_05585"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HEX9555945.1"
                     /translation="MRALVRLGAGLAKFLAGAALAILVFLAGAFFQVRGALPAYSGHV
                     EAKGLRAPVEILRDKNAVPHIIAGSIEDAAFGLGYVHAQDRFWQMELMRRLGQGRLSE
                     IVPPRLVGSGLVDTDRTMRGLGLYRKAGESMNALAPGMRTIIEAYAAGVNAWLSRDDQ
                     QFGLELTMIKLLSGGRYRPEPWRAADSLVWAKLMALGLDGNWRAELLRLRLARKIGED
                     GVKFLIEPPGDNRDATLSLVNEALHGTDLDRLYDATDNIATRKRQASNEWVLSGAHSV
                     SGKPLLANDPHLALAFPGTWYLARLVGPGFDIRGATSPGSPAVVLGHNGTIGWGFTTT
                     NLDSQDLFVERVDPTDPNRYITPDGARPFGVRDETINVAWGDPVTLRVRETRHGPVIN
                     DFIRRSDDLSPQGHVLALQATALDGNDTSAEGFGRFGLAQNWEDFLNAARKIVSPMQN
                     IVYADTAGNIGLVSPAHVPIRRKGDGSMPVPGWTSDFDWAGFVPFDELPRIYNPPSGI
                     IVNANARVVPDDYRHFITRDWGEPYRQLRANQLLREVERHPVYGMIVMQADILTGDAA
                     GMLPLLLKGAPRNARAARVHELMSRWNRFMLANRAEPLIYTAWIWQLQRGLLADELGE
                     DLFETMVMPDVPLMMRIVRDKPGWCDDGGTRQTETCEDQIALALDRALDWIARRQGPD
                     IDKWQWGHEHFAAHRHPLFDSVPLLRDLASVRFASDGGAQTLNRAHPSYRGDRPFDAV
                     LGPAYRGVYDFSDLDNSRFAMPLGQSGNMLSPWARNFVDRWQTLGYVEIAGTHAEVVR
                     TAVGTITLSPPAR"
     gene            7297..>7677
                     /locus_tag="VF991_05590"
     CDS             7297..>7677
                     /locus_tag="VF991_05590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX9555946.1"
                     /translation="MAKFLITSALPYVNGVKHLGNLAGSLLPADIHARFRRQTGHEVL
                     FLCGTDEHGTPSELAAQAVGLPVTEYCSRQHAIQADIYRRFGLSFDHFSRTSGAANRL
                     LTQELFRHLDAAGYIEPRVIRQAYS"
BASE COUNT         1262 a         2650 c         2501 g         1264 t
ORIGIN      
        1 cgcatcatcc tcatgagcgg acctggaggt ccgcgctccg gcaggatcga tgatgctagc
       61 gccgatcccg ctcttccttc tcgcgcttgc gccgctcatc ctcggccgag gcgccgcgat
      121 aggcgcgcca cgccaacacg agcgcaacca gcgagcaggc gacgccgaca atcagtgcga
      181 tcggttctgt ctcagccatg gtcgaaaaac ctcgctacgg ccaggtcgct ccacggctgt
      241 cggctaaccg tgccatggaa gccgacatgg ccgccccgct cgggcaagag cggcgcaagc
      301 gaccggttcg atgtccaatc atagctcctg tagagggcgc ccggaatcca gggatcgtcg
      361 agcgcggcca cggccagggt gggaacgcgg atgccggcca tgaaccgggt cggccggcag
      421 cgatcatagt agtcctcggc acggccgaag ccgtagcgcg gcgcgatgaa ggcgtcgtcg
      481 taatcccata tcgagcgagc gcccatgatc gcggcgcgct cggcggccga aacgacggcg
      541 ccctcggccg tcgcttcgac cttcatgagg ccgagaatgt agcgatgata ggccttgttg
      601 cgccgccgca tcatgtaccg gcaggtggcg gcaagatcga tcggcgccga gacggtggct
      661 gccgccgcga gcggcgcggc cgcgccctcc tcgccgaggt acttcaggag catcgcgccg
      721 cccagcgaat agccgacagc gaccatgccg tcgcccgtca gctcggccgg cagcacggac
      781 agcagggcgc ggaagtcctg gctgcgcccg gcataatagt gctggccgca gagcgaccgc
      841 gagggccccg ccccgcgcag attgagccgc aagacgcgcc aaccccggtc gagcatcagg
      901 cgagccatgc tgaggatgta gagactgtcc tctgccccgg tcaggccgtg gatcaggatc
      961 accagcggcg tgccctgctt tggcgtcgcc ggccggtcga ggctcgccag aagcatatcg
     1021 ccggtgccgt caggcaaggc aaacgccagc cgttcgctgg catgcggcgc gagcgacctc
     1081 gacacgccgc gcagccggtt ggcgatggtc tgcaggtccc tgccccacca gggaaagcgc
     1141 ggtcggaagg gcggtaggtc gaggctcacg ccgccatgct agtattgact gacactgaat
     1201 caagattgtc atcccgaggc cgaaggccga gggatcttta aagcgacagc aaaggtccct
     1261 cgcttcagcg cggatcagat ccgcgcgact cgggatgacg gcggacgcct cagcagatgc
     1321 gctctaaaaa cttctccaag gcgaggtcgc accagggctg ctcgctcaag tcgcagtgga
     1381 aaccgagatg cccgccgcct tcggccatca ccggcagcag ccagggattg tcggcccagt
     1441 tgtagtcgcg atagtactcg gccggaatcc acggatcgtc gcccgccgcc agcaccatgg
     1501 tcggcacacg gatctcgggc atgtaggtca gcggcgtgca cagcccatag tagtcatcgg
     1561 cgccgcggaa accgtaccgc ggcgagatga agcggtcgtc gtattcgaac atgctgcgtg
     1621 cgttgcggac gatctctcgc tcttccggcg agatgctggc ggcctcggcc agcgcctgct
     1681 tcttcaggtc gttcaggatg tagttgtgat agagccaatt gcgcggccgc atcatgtgct
     1741 ggcaggtgcg tatcaggtcg accggcgcac agatcgaggc ggccgcccgc aacggcgaga
     1801 acgagccctc ctcgccgaga tacttcagca gcatcgcacc gcccatcgaa tagccgaccg
     1861 cgacgatgcc gttgtcggtc aggtcgtcag gcagttgcca cagcacgcgg cgaaagtcgg
     1921 cggtgcggcc gatgtggtag tgctcgcggc aataaggacg ggaggcgccg cagccgcgca
     1981 ggttcacccg caacacactg tagccatgat cgagaatatg ccgcgcagcg ttcagtatgt
     2041 acgcactgtt ctcgcaaccc gtgaggccat gaaccaggat caccaggggc cggccggcct
     2101 gcggttccgc cgggcggtcg agcatgccca ccaaaatgtc accgctgcga tcggccatgc
     2161 agaaacacac gcgctcgctc ttgtgcggtg aaagatccga ttcgtaggtg ccgaggagca
     2221 ccgcgatggt ctgcaggtcc gcgctccacc acggaaagcg cggccggaac ggcggcaaat
     2281 caagcgattc gagggaatcg atggacgggg gcacgtcgag tccgtattca cagtttgttt
     2341 ggcatgacaa cgctgtctgg ttcgccgggt tccgccgcgc tgggcgtcct ctatgccgtg
     2401 ggcgctgcag cggtcttcag cacggcgggc gtcatcgtgc gccgcatcga gctgccggcc
     2461 tgggatatat ctttttggcg ttcggccttg ttggttgcca ccatgttgcc actgctcttc
     2521 tggcaacgtc gcggcttgct gatcgacgtc cgcaatgccg ggcctgcgct tttgctgagc
     2581 gcgctcttgc tggcgggcag cttcgtcgcc ttcatcctgg cgctcgggct ggcgccggtc
     2641 gccaacgtcc tgctgatgtt cggcgccacg ccgttcatca ccgcgctgct cgcccgcctg
     2701 ttcctcggtg aaccgctgca cggccatacc atccttgcca tggcggcggc ggtgctgggg
     2761 cttgcgatca gcgtcgccgg ctcattgcag gccggcgcgc ttgccggcat ggcggtggcc
     2821 ttgatcgtcg tgctgtgcat gagcggcaac tatgtcgtcg tccgccatcg ccgcgacatc
     2881 ggcatggcgc cggcgatctg gctggccggc gtgatctcgg gtctggcggc gctgccgttc
     2941 gcccatcccg gcaacgtcac atggtcgcag gtgccgtggc tgctggcgct cagtcccggc
     3001 cagcttgccg gtggcctgct tctctacatg gccagtctca agcgcatccc ggctggacgc
     3061 gccgccttgc tcggcctgct cgaactggtg ctcggcccgc tctgggtgtg gctgttcgac
     3121 ggcgaaaagc cggacgacct caccttgctg ggcggcgcca tcgtgatcgg cgccgccgcg
     3181 gcaaacgtgt ggctggattc gcggcgaacc actggttaag aaccgcacat gacccagaac
     3241 gctcagtccg gctccacagg cggccccttg tcgggcatcg tcgtcgtcga tctctcgcgc
     3301 attctcgccg gcccctactg cacgctgctg atggccgaga tgggcgcgcg ggtgatcaag
     3361 gtcgagccgc ccaagggcgg cgacgatgca cgcgcctacg ggcccttcgt caagggcaag
     3421 tcgacctact ttgcctcggt caatcgcggc aaggagagca tcgcgctcga cctcaaggcc
     3481 gatgccgacc gcaagatctt cgagaagctg ctgcacaagg ccgacgttat cgtcgagaac
     3541 ttccggccgg gcaccatgga aaagctgggc tacggctggg acaccctgca caagaagtat
     3601 ccccggctga tctatgcctc ggcctcgggc ttcggccata gcggcccgaa ttccaaggat
     3661 cccgcctacg acatggtcgt gcagggcatg ggcggcatca tgagcatcac cggcaatgag
     3721 ggccagccgc cggcgcgggt tggcatgtcg atcggcgaca tcggcgccgg cctcttcacc
     3781 gccgtcgcgg tcaatgccgc gctggtccac cgtctcaaga ccggcgagtc gaccaagatc
     3841 gatatcggca tgttcgattg tcagctggcg ctcctggaaa acgccatcat gcgctacacg
     3901 gtcgaaggcg agatcccggg tcccctgggc gcgcgccatc ccaccatcac gcccttccag
     3961 gccttccgca cgtccgacgg cgccatcatc atcgccgccg gcaacgacgg tcttttcatc
     4021 aagacctgcg aggcgctcgg ccgggccgac atggcgagcg atcccaacta caagaccaac
     4081 gcgctgcgcc agaagcatca cggcacgctc gagcgcgaga tcgaggcggt gctccagcgc
     4141 aacacgacgg cgcactggat cgccatcctg tcgaaggcgg ggataccctg cgggccgatc
     4201 aacaacatca agcaggcgct cgagcacccg caggtcgcgg cgcgcaacat gctggtcgag
     4261 gtgcccgacg gcagcggcgg cacgctccga ctggccggca atccgctcaa gatgtcggcc
     4321 ttcgccgatc caaagacgcg cgcgccggcg cccgatctcg acagcgaccg cgaggccatc
     4381 ctctcctatc tcggcggcta gagagcgttt cccgtgaaac acgccttctc agacctcctc
     4441 tccgccgcgc agcgggggag aggaaggggc ccgttgcgaa gcaacgggaa ggtgaggtgg
     4501 tgtgagatgc aaaggtggcg ggcgggttgt gaggtccatg acccccctca ccctccccgc
     4561 gcttcggcgc cttcacaggc gcctttagcg cgggtcccct cgctctcccc ccgcttcgcg
     4621 ggcggagagg gccttgtggt aggacgctaa atcgtgcgcg cgctcgtccg cctcggcgcc
     4681 ggcctggcga agttcctggc gggcgccgcg cttgcgatcc tggtgtttct ggccggcgcc
     4741 ttcttccaag tgcgcggcgc gctgccggcc tatagcggcc acgtcgaagc caagggcctg
     4801 cgggcgccgg tcgagatcct gcgcgacaag aacgccgtgc cgcacatcat cgccggctcg
     4861 atcgaggacg ccgccttcgg cctgggctac gtccatgccc aggaccgctt ctggcagatg
     4921 gagttgatgc gccggctggg ccagggccgg ctgtcggaaa tcgtgccgcc gcggctggtc
     4981 gggtcgggcc tcgtcgacac cgaccgcacg atgcgcggcc tcggactcta ccgcaaggcg
     5041 ggcgagagca tgaatgcgct ggcgccgggc atgcgcacca tcatcgaggc ctatgccgcc
     5101 ggcgtgaacg cctggctcag ccgagacgat cagcagttcg gcctcgagct caccatgatc
     5161 aagctcttgt cgggcggccg ctaccggccg gagccgtggc gggcggccga ttcgctggtc
     5221 tgggccaagc tgatggcgct cggcctggac ggcaactggc gggccgagct gctgcgcctg
     5281 cgactggcgc gcaagatcgg cgaggacggc gtgaaattcc tgatcgagcc gccgggcgac
     5341 aaccgcgacg ccacgctgtc gctggtcaac gaggcgctgc acggcaccga cctcgaccgg
     5401 ctctacgacg ccaccgacaa catcgccacg cgcaagcgcc aggcgtcgaa cgaatgggta
     5461 ctgtcgggcg cccattcggt gtcgggcaag ccgttgctcg ccaacgatcc gcaccttgcg
     5521 ctggccttcc ccggcacctg gtacctcgcg cggctggtcg ggccgggctt cgacatccgc
     5581 ggcgccacct cgcccggctc gcccgccgtc gtgctcggcc acaacggcac gatcggctgg
     5641 ggcttcacca ccaccaacct cgacagccag gacctgttcg tcgaaagggt cgatccgacc
     5701 gatcccaacc gctacatcac gcccgacggg gcgcggccgt ttggcgtgcg cgacgagacg
     5761 atcaacgtcg cgtggggcga tccggtgacg cttcgcgtgc gcgagacgcg tcacggtccg
     5821 gtgatcaacg atttcatccg ccgctccgac gatctctcgc cgcagggcca cgtgctggcg
     5881 ctgcaggcca ccgcgctcga cggcaacgac acctcggccg aggggttcgg ccgctttggg
     5941 ctggcgcaga actgggaaga tttcctgaac gcggcgcgca agatcgtctc gccgatgcaa
     6001 aacattgtct acgccgacac cgcggggaac atcggcctgg tgtcgccggc gcacgtgccg
     6061 atccggcgca agggcgacgg ctcgatgccg gtgccgggct ggacgtcgga cttcgattgg
     6121 gcgggcttcg tgccgttcga cgagctgccg cggatctaca atccgccgag cggcatcatc
     6181 gtcaacgcta acgcacgcgt ggtgcccgac gactaccgtc acttcatcac ccgcgattgg
     6241 ggcgagccct accgccagct ccgcgccaac cagctcctgc gcgaggtcga gcgccatccg
     6301 gtctacggca tgatcgtcat gcaggccgac attctcaccg gcgacgccgc tggcatgctg
     6361 ccgctcttgc tgaagggggc gccgcgcaac gcccgcgccg ctcgggtgca cgagctgatg
     6421 agccgctgga accgcttcat gctggcgaac cgcgccgagc cgctgatcta tacggcgtgg
     6481 atctggcagc tgcagcgcgg cctgctggcc gacgagctgg gcgaggacct cttcgagacg
     6541 atggtcatgc ccgatgtgcc gctgatgatg cgcatcgtcc gtgacaagcc cggctggtgc
     6601 gacgacggcg gcacacgcca gaccgagacc tgcgaggatc agatcgcgct cgcgctcgac
     6661 cgtgcgctgg actggatcgc ccgtcgccag ggacccgaca tcgacaaatg gcagtggggc
     6721 cacgaacact tcgctgcgca tcgccacccg ctgttcgatt cggtgccgct gctgcgcgat
     6781 ctcgcctccg tacgctttgc atcagacggc ggcgcgcaga cgctcaaccg cgcccatccc
     6841 tcttaccgcg gcgaccggcc gttcgacgcc gtgctcggac ccgcctaccg cggcgtctat
     6901 gatttcagcg acctcgacaa cagccgtttc gccatgccgc tcggccagtc cggcaacatg
     6961 ctctcgccgt gggcgcgcaa cttcgtcgac cgctggcaga cgctgggcta cgtcgagatc
     7021 gctggcaccc acgccgaagt cgtccgcacg gccgtcggca cgatcaccct gtcgccgccg
     7081 gcgcggtgag ccaggcccat tgacgcgcgt cccgcgagga ccaatattca atcgatgttc
     7141 gacaccgctc gccttgcctg ctcgcgaatg cgccagcccc ttcgaccgga cggggcggaa
     7201 ggatgacgcg cgggcgatag cagcttgatc ggtctctcca gcccttccgc gcgaagggct
     7261 ttttcatgtc cgcacgcgac acgatggaga gatcccatgg ccaagtttct gatcaccagc
     7321 gcacttccct acgtcaacgg cgtaaaacat ctcggcaacc tcgccgggtc tctcttgccg
     7381 gccgacattc atgcgcgctt ccgccggcaa accgggcacg aggtgctgtt tctctgcggc
     7441 acggacgaac acggcacgcc ctccgagctc gcagctcagg cggtggggtt gccggtcacc
     7501 gagtattgct cgcgtcagca cgcgatccag gccgacatct atcgtcgctt cggcctctcg
     7561 ttcgatcact tctcgcggac ctcgggcgcc gccaaccgac tgctgacgca ggaactcttc
     7621 cggcacctcg atgccgccgg ctacatcgag ccgcgcgtta ttcggcaggc ctattca
//
LOCUS       DASWGA010000230         2707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1292534, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000230 DASWGA010000000
VERSION     DASWGA010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1292534"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..145
                     /locus_tag="VF991_05595"
     CDS             <1..145
                     /locus_tag="VF991_05595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555947.1"
                     /translation="LSPHGLAVDSKGDIYVGEVSYTNWSGTHPDVPVPKFLRSLQKLE
                     KVA"
     gene            146..1189
                     /locus_tag="VF991_05600"
     CDS             146..1189
                     /locus_tag="VF991_05600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555948.1"
                     /translation="MQPQERLHLIGSIPLDNSEQVFRRLTDELGPFLRCLPDGETGER
                     SRWVYFQRQMLQEHPAMEIDPTVPPYKFVQWDGKVVREIEQLRFKPGVDPATVAFDTG
                     YDKAALASYETFKRLRAAGTIPRHVRFQVCLPTPQASGYLYVSRPARETYFAVYERAL
                     KTALGNIAKAIPASDLTIQWDVCQEVLVFENYFENRPPSYKKQIFDMLGRLGDAVPEG
                     VEMGFHLCYGSPRDEHLVQPKDSAVLVEMMDGIAAATRRRIDFMHIPVPKDRTDDAYY
                     APLGTWRRPPGTTLYLGLLHHDDAAGDARRIAVARRQVGQFGLAAECGWGRTEPGRLP
                     GLLKGHRLAAEAF"
     gene            1236..2150
                     /locus_tag="VF991_05605"
     CDS             1236..2150
                     /locus_tag="VF991_05605"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEX9555949.1"
                     /translation="MVDDLAPKGFEIVKALHNSPEMKAAIPGTDYFVGFVQQYVTPQL
                     FKDAPRLKLIQMLSAGYDRADLDAARKSKVPLCNNGGANSVAVSEHAMLLMLSVSRRL
                     ITQHSNVVAGRWHGNAPPTVHEVRNKVLGIVGLGTIGKKVARLAQAFGMVVHYYDIAR
                     LKEEQEDALGVRFRLLPEILRHSDIVSLHVPLNASTQHMIGAAELAAMKPSAIIVNTS
                     RGPVIDEKAMTAALSAGKLFGAGLDVFDEEPTPPDNPLLKLDNVILTAHLAGPTFESN
                     VTRLRNGFDNVQRVARGEPALWVVPELL"
     gene            complement(2398..>2707)
                     /locus_tag="VF991_05610"
     CDS             complement(2398..>2707)
                     /locus_tag="VF991_05610"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9555950.1"
                     /translation="ASLGDRERSRLDLDKAIELDPDDVIYRAVRGRIFLDEGRIAQAF
                     EDFNRAVEVDPDTAMFLYFRAVTRLRQGDASGAEADFAKAREITPGIAQQLAEEGIWP
                     "
BASE COUNT          483 a          921 c          850 g          453 t
ORIGIN      
        1 cctgtcgccg cacggcctcg ccgtcgacag caagggcgac atctatgtcg gcgaggtgag
       61 ctacaccaac tggtccggca ctcatcccga cgtgccggtg ccgaagttcc tgcgctcgct
      121 gcagaagctc gagaaggtgg cgtgaatgca gccacaggag cggcttcatc tgatcggcag
      181 catcccgctc gacaacagcg agcaggtgtt tcgccgcctg accgacgagc tcggcccttt
      241 tctacgctgc ctgcccgacg gcgaaaccgg cgagcgttcg cgctgggtct atttccagcg
      301 ccagatgctg caggaacatc ccgccatgga gatcgacccg acggtgccgc cctacaagtt
      361 cgtccagtgg gacggcaagg tcgtgcgcga gatcgagcag ctgcgcttca agcccggcgt
      421 cgatccggcg acggtcgcgt tcgacaccgg ttacgacaag gccgctctcg cctcctacga
      481 gactttcaaa cgtctgcgcg cggccggcac gatcccccgg cacgtgcgtt tccaggtctg
      541 cctgccgacg ccgcaggcga gcggctacct ctatgtcagc cggccggcgc gcgagaccta
      601 tttcgccgtc tatgagcgcg ccctgaagac ggcgctcggc aacatcgcca aggcgatccc
      661 ggcctcggac ctcaccatcc agtgggacgt ctgccaggaa gtgctggtct tcgagaacta
      721 cttcgagaat cgaccgccgt cgtataagaa gcagatcttc gacatgttgg ggcggctggg
      781 cgatgcggtg ccggaagggg tcgagatggg ctttcacctc tgctacggct cgccgcgcga
      841 cgagcacctg gtgcagccca aggactctgc ggtcctggtc gagatgatgg acggcatcgc
      901 cgccgccacc cgccggcgca tcgacttcat gcatattccg gttcccaagg atcgcaccga
      961 cgacgcctat tacgcgccgc tcggaacatg gcggcggccg ccgggaacca cgctctatct
     1021 cggcctgctg caccacgacg acgcggccgg cgatgccagg cgcatcgccg tggcgcgccg
     1081 ccaagtcggc caattcggcc tcgcggccga gtgcggctgg ggccgcaccg agcccgggcg
     1141 cctgcccggc ctgttgaagg gtcatcgtct agctgcggag gcattctaaa atggttgaac
     1201 gcgtactcgt tgtcgggccg aaggacactc tctccatggt cgacgacctc gcgcccaagg
     1261 gcttcgagat cgtcaaggcg ctgcacaact cgccggagat gaaggcggcg atccccggca
     1321 ccgactattt cgtgggcttc gtgcagcagt acgtcacccc gcagctcttc aaggacgcgc
     1381 cgaggctgaa gctgatccag atgctgagcg cgggctacga ccgcgccgac ctcgacgccg
     1441 cgcgcaagag caaggtgccg ctgtgcaaca acggcggcgc caactcggtc gccgtctccg
     1501 agcacgcgat gctgctgatg ctgtcggtgt cgcgccggct gatcacccag catagcaacg
     1561 tcgtcgccgg acgctggcac ggcaatgcgc cgccgaccgt ccacgaggtg cgcaacaagg
     1621 tgctgggcat cgttggcctc ggcaccatcg gcaagaaggt ggcgcggttg gcgcaggcct
     1681 tcggcatggt cgtgcactac tacgacatcg cccggctcaa ggaagagcag gaggacgcgc
     1741 tcggcgtgcg cttccgcctg ctgcccgaga tcctgcggca ttccgacatc gtctcgctgc
     1801 acgtgccgct caacgcctcg acccaacaca tgatcggcgc ggccgagctt gcggcgatga
     1861 agccgtcggc catcatcgtc aacacctcgc gcggtccggt gatcgacgag aaggcgatga
     1921 ccgcggcgct gtcggccggc aagctgttcg gcgccggcct cgacgtgttc gacgaggagc
     1981 cgacgccgcc cgacaatccg ctgctcaagc tcgacaacgt gatcctgacg gcgcatctcg
     2041 ccggcccgac cttcgagagc aacgtcaccc gcctgcgcaa cggcttcgac aacgtccagc
     2101 gcgtcgcccg cggcgagccg gcgctctggg tggtgcccga gctgctttag cgcgccggcc
     2161 atattccgcc tcgcgagggg aaacgggagt ttccgcattt cccgcaattt ccgctaaccg
     2221 ttttcgaggt gccggcggcg ggtcggccgt tgcgcgccgc gcgggacaac atgcaagccg
     2281 atagacatga cgccggccct ccttcggccg gacgaggagt ttaccgtaaa cgtcagtatt
     2341 attcaaggaa aaagttcgtt tttacttaag ttcgcgtcaa cgacacagca catcaactca
     2401 aggccaaatc ccctcctctg ccaattgctg ggcaattccg ggggtgatct cccgggcctt
     2461 ggcaaagtcg gcctcggcgc cggaggcatc gccctgccgg aggcgggtca ccgccctgaa
     2521 atagagaaac atcgccgtgt ccggatcgac ctcgacggcg cgattgaagt cctcgaaagc
     2581 ctgagcgata cggccctcat cgagaaatat ccgtccgcgc acagcgcgat agatcacgtc
     2641 gtcaggatcg agttcgatcg ccttgtcgag atcaagacgg ctcctctccc ggtccccaag
     2701 ggacgca
//
LOCUS       DASWGA010000231         1710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2433424, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000231 DASWGA010000000
VERSION     DASWGA010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2433424"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..781)
                     /locus_tag="VF991_05615"
     CDS             complement(<1..781)
                     /locus_tag="VF991_05615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010911063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555951.1"
                     /translation="MTVSVDLDHRPPLTFYLSVGLVAGSIIALQIGIMRVFSVGSWAH
                     FGSLVVSLAMFGFGLTSAVMCVAKGWFERHWQGAIKGALLAFGPLMVVCNLAAQQVPF
                     NAIFLISDPMQKWRLLANFVLYFLPFLAGALYLGVVFLKARKSFNRVYFADLVGSGLC
                     GLSVLLAMYFYRPDDLIMAPLLLWLAGGVLWFTAIGDRRGIMAIVGVAVLTAAVHYVA
                     PPALGIPKLAVSDYKGVSYARKFPDALRIYERASPFGYLEVY"
     gene            complement(877..>1710)
                     /locus_tag="VF991_05620"
     CDS             complement(877..>1710)
                     /locus_tag="VF991_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEX9555952.1"
                     /translation="MIAGGASLPALSATINSYSWDLDPPTDSRDSFIAWGKARGEDPV
                     FLGQRWDRFQALLKNKDIWGAATIRAFLMTPREEFASVNPAIHKRAYEHAFLDIGWGV
                     TMSGPHLQARMTNVIDVKRGEKVLEIGTGSGVQSAYIANLTDNAYTIEIIKPLGERTR
                     ALYDKLIDKGYTEYQHVKSKVADGYYGWEEAGPFDKIIVTCGIDHVPPPLLQQLKAGG
                     LMVIPVGPPGAQRVLKVAKTQGADGSITTSREDIYGGKIVPFVPFTKLEGDQVVGTHN
                     R"
BASE COUNT          315 a          540 c          586 g          269 t
ORIGIN      
        1 aatagacttc gagatagccg aacggcgagg cgcgctcgta gatgcgcagg gcgtcgggga
       61 acttgcgcgc ataggagacg cccttgtagt ccgacaccgc gagcttgggg atgccgagcg
      121 ccggcggcgc gacatagtgc acggccgccg tcagcacggc gacgccgacg atcgccatga
      181 tcccgcgccg atcgccgatt gcggtgaacc acagcacgcc acccgccagc cacagcagca
      241 gcggcgccat gatgagatcg tcgggccggt agaaatacat ggcaagcagc acggaaagcc
      301 cgcacaggcc cgagcccacg aggtcggcga agtagacgcg gttaaaactc ttgcgcgcct
      361 tcaggaacac cacgccgaga tagagcgcgc cggccaggaa gggcaggaaa tagagcacga
      421 agttggcgag cagccgccac ttctgcatcg ggtcggagat caggaagatg gcgttgaacg
      481 gcacctgctg ggccgcgagg ttgcacacca ccatgagcgg cccgaaggcc agaagcgcgc
      541 ccttgatcgc gccctgccag tggcgctcga accagccctt ggcgacgcac atgacggcgc
      601 tggtgagccc gaagccgaac atggcaaggc tcaccaccag cgagccgaaa tgcgcccagc
      661 tccccaccga gaacacgcgc atgatgccga tctgcagcgc aatgatgctg ccggcgacca
      721 ggccgacgga caaatagaag gtaagaggcg ggcgatggtc gagatcgacc gaaacggtca
      781 agggggactc cgttgttgtt gggccgtcat tgcggccggg cggggtcgcg cgtgcttggc
      841 gcgcggcccc gtcatctcag cgtcgtcttc ccggcgtcag cggttgtgcg tgccgacgac
      901 ctggtcgccc tcgagcttgg tgaagggcac gaacggcacg atcttgccgc cgtagatgtc
      961 ctcgcggctg gtggtgatcg aaccgtcggc cccttgcgtc ttggcgacct tgagcacgcg
     1021 ctgcgcgccc ggcgggccga ccgggatgac catcaggccg ccggccttga gctgctgcag
     1081 cagcggcggc ggcacgtggt cgatgccgca ggtcacgatg atcttgtcga agggaccggc
     1141 ctcttcccag ccgtaatagc cgtcggcgac cttgctcttg acgtgctggt actcggtgta
     1201 gcccttgtcg atcagcttgt cgtagagcgc gcgcgtgcgc tcgcccaacg gcttgatgat
     1261 ctcgatcgtg taggcattgt cggtgaggtt ggcgatgtag gccgactgca cacccgagcc
     1321 ggtgccgatc tcgagcacct tctcgccgcg cttgacgtcg atcacgttgg tcatgcgcgc
     1381 ctgcagatgc gggcccgaca tggtcacgcc ccagccaatg tcgaggaagg cgtgctcgta
     1441 ggcgcgcttg tggatcgccg gattgaccga ggcgaattcc tcgcgcggcg tcatcaggaa
     1501 agcgcggatg gtcgcggccc cccagatgtc cttgttcttg agcagcgcct gaaaacgatc
     1561 ccagcgctgg ccgaggaaca ccggatcctc gccgcgcgcc ttgccccagg cgatgaagct
     1621 gtcgcgcgag tcggtcggcg ggtcgagatc ccagctgtag gaattgatgg tggcggaaag
     1681 ggccggaagg cttgcaccgc cggcgatcat
//
LOCUS       DASWGA010000232         9502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_282153, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000232 DASWGA010000000
VERSION     DASWGA010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9502
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282153"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VF991_05625"
     CDS             <1..301
                     /locus_tag="VF991_05625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555953.1"
                     /translation="GIMGYAPHMMPQVGEIEPGLWVCSAFGGHGLAQTAAGADAVAAG
                     IAGEDDRWRLFEPFGVRWAGGPLGRLATQLVYWRLQASDWWNEKRQARNAETLRT"
     gene            complement(508..993)
                     /locus_tag="VF991_05630"
     CDS             complement(508..993)
                     /locus_tag="VF991_05630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555954.1"
                     /translation="MEGALMNLSRGLIAVACTVFAGAMPAHAWWQYAEWGLSQSQIVS
                     ASSGQAVPCRPDAPACARTPSGGQPSIFVPSTQMLGMPASVAFTFNGAGGLSETTVLF
                     TDADFAMISGLLLGIQGQPVEDRQAAGKVWRDQRRGSTITAMPAGRGTRVTYRPTTPA
                     G"
     gene            1352..2446
                     /locus_tag="VF991_05635"
     CDS             1352..2446
                     /locus_tag="VF991_05635"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9555955.1"
                     /translation="MATACALAIPSARGQSTPTPLAVLVQPAEVRPLASQREFIGRAQ
                     AADKVDLRARVQGFLGARRFADGDMVKEGQVLFVIEPEPYQAEVEQKEGQRAAAAATL
                     INAELQYKRADELARTNVGTQAVRDIRLAELEQARGTLKQTDAALRDAKIKLSYTEVK
                     SPINGRVGRAAVSPGNLVGSETGILTTVVAEQPMRVVFSVTQRELLEARRGGSSGGSL
                     KARIRLADDSLYDEEGTLDFIDVQVDPRTDGQTLRATFPNAARALTEGQTVRVILEEK
                     KAAEFVVVPLSVIANDQTGPYLFVVGADNKAEQRRIKPGIERDGMIAIEDGLKAGDKV
                     IVQGQQRVRPGMVVAPELAPAATPAAQPSR"
     gene            2451..5597
                     /locus_tag="VF991_05640"
     CDS             2451..5597
                     /locus_tag="VF991_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9555956.1"
                     /translation="MTISSLFINRPRLAFVISAVITIAGLIAIQALPVAQFPDIVPPQ
                     VKVTATYTGASATVVESTVAQVIEAEVNGVERMIYMKSNSGGDGSYALTVSFAVGSDP
                     DLNTVNVTNRVNQALARLPPEVQRNGVIVKKQSSALLQLIAVHSPKGSRDGQFLSNYA
                     TIEMLDMLRRVPGVGDAVLFGPLDYAMRAWVSLDRMASLDISTDDVVKAIQSQNIQAA
                     VGRVGAAPLMGPVEFELNITTQGRLSSIKEFEDIVVRTNAQGTVVRLKDVARLELGAK
                     TSDSVGRYNGKPAAGIQIYQLPGANALATARGVREALKELDPLLPQDVAYDIMYDTTV
                     FVEATIESVIHTLFEAFVLVGIVVFIFLGNLRATLIPIIAVPVALVGTFAVMLALGFS
                     ANTVSLLALVLAIGIVVDDAIVVVEAVEHILETEPDLTPAQATEKAMSQVTGPIIAIT
                     LVLLSVFIPTAFIPGIAGQMYQQFAVAVSASMVISALNALSLSPALCSLILRHRTKKG
                     GLIARLHKGIDHTRDGYVRLATPLARRSIIAGLLALAFIVATGGMARIVPTGFLPNED
                     QGAFMGEIQLPDAASTNRTLAVVEQVEGIIEAKPWLQNLFTVSGYSMLDGLNLPNRAF
                     FVAALKPFDERKASDMSVFAALKQLNEEFRRVAVATIIPFNLPPIIGLSTSAGFEFQL
                     VSRTGASPADMAATARGLVVAAQGEPALAGVYTTYGASTPQIYLDLDRERAQILGVDI
                     AEVFNALQTAMGGYYANDFNLFGRTWQVKVQADAADRRSARDIYRVRIRTADGELIPL
                     RAVAEIRLVNAPSQVIRYNNLRSVTINGGPAPGYSSGQAMQAMETLAKRVLPAGFGFQ
                     WTGTAFQEKAAAGQTAAILVLALVFSYLFLVGLYESTAIPMAALLSISAGLFGAMAGL
                     LLSGLDNNLFAQIGIVVLIALAAKNAILIVEFAMEQRRQGKDIVHAATEAAALRFRAV
                     MMTSFAFIFGLVPLVIATGAGAATQRAVGTAVFGGMIAASCLGIFVIPGLYVLFQTLR
                     EKIKLVVSRGPSKKAPLL"
     gene            complement(5697..6323)
                     /locus_tag="VF991_05645"
     CDS             complement(5697..6323)
                     /locus_tag="VF991_05645"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX9555957.1"
                     /translation="MLALGSIRQWKRRETIFRAGDPIGSFFKIRKGMVAVSRALDDGR
                     RQIIAIRMPGDCVGYVDTAGAYAFEGEALTDVETCGFDRHKFDAFAAQHPDLAAALAE
                     TLSDALKQTGEAMLVLGQLSSTERVAHFLAEIDALYRERHVSVKPLSLHMGRGDIADY
                     LGLTIETVSRSIGKLKKRGVIGLVGSDEVMIFDYDRLRSIGKVQKATL"
     gene            complement(6565..7005)
                     /locus_tag="VF991_05650"
     CDS             complement(6565..7005)
                     /locus_tag="VF991_05650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEX9555958.1"
                     /translation="MTLPQALAILVASVLCIAIHASIMTIVVRVARAVAARTAVRPTL
                     LMIATMIAAVSVLMVAHVIEVAVWASTYDIVGAAPEGADTLYFAFVNYTTLGYGDVIP
                     VSGWRMLGPATAMCGVLMFGWSTAVIFEVLRKAMSYERVDTGQR"
     gene            complement(7103..7540)
                     /locus_tag="VF991_05655"
     CDS             complement(7103..7540)
                     /locus_tag="VF991_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555959.1"
                     /translation="MAKLPTVKELQITIAQIEGEKASAAFKAHEAAEAEKKALLDRLS
                     KPSGMSDDEIIEKATIIISRAVGNGMTSVQVLRFPHTLCTDNGRAINQAEVGWEKTLT
                     GIPRELYEFWQRRLKPNGYHIRYEIIDFPGGMPGDVGVTLSWG"
     gene            complement(7589..8389)
                     /gene="ppk2"
                     /locus_tag="VF991_05660"
     CDS             complement(7589..8389)
                     /gene="ppk2"
                     /locus_tag="VF991_05660"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HEX9555960.1"
                     /translation="MSKGGREQLKRKVYEKELKKLQVELCFLQDWVKSTSERAMIVLE
                     GRDAAGKGGLIKAITARVSPRVFRVVALPAPSDRDKTQMFMQRYIERFPAGGEIVIFD
                     RSWYNRAGVEHVMGFVTPEQHKRFLELCPLVEKFVVDGGIRLIKIWLEVGQEEQERRF
                     MARIEDPLRQWKLSPMDLVSYRRWYDYSKARDVMFEYTDTDATPWYIVDSNDKRRARL
                     NAISHILSQIPYKRIERAEAKLPDRSHKRKYDDQASLKGRRLVADKYG"
     gene            8538..9329
                     /locus_tag="VF991_05665"
     CDS             8538..9329
                     /locus_tag="VF991_05665"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HEX9555961.1"
                     /translation="MLLAQISDLHVRPTGKLYKDAVDSNRMFAEAIDHLNRLDPRPDL
                     VLITGDLVDEGLKAEYDSLRALLAGLEPPHLLMAGNHDDREMLARSFPDHAYLPATGA
                     KHYLIDRHPVRIVALDTTVPGDHHGEIDEAGLAWLERALQATRGAPTVVLMHHPPIAC
                     GIPYLDKYMCRRPERIAAVIGRFSHVERVLCGHVHRPILQRWAGTLLCCCPSTATQIA
                     LQLRPDARPASFREPPACLLHWWRDGVMVTHTSYIGRFDGPYPFA"
BASE COUNT         1619 a         3150 c         3016 g         1717 t
ORIGIN      
        1 cggcatcatg ggctacgcgc cgcacatgat gccgcaggtc ggcgagatcg aacccggcct
       61 gtgggtgtgc tcggcgttcg gcggccatgg gctggcccag acggcggcgg gggccgatgc
      121 cgtggccgcc ggcatcgccg gagaagacga ccgctggcgg ctgttcgagc ctttcggcgt
      181 ccgctgggcc ggcggtccgc tgggccgctt ggccacgcag ctcgtctatt ggcggctgca
      241 ggcgagcgac tggtggaatg agaagcgcca ggccaggaac gcggagacgc tgaggacatg
      301 aggccgagcc cgggccctga ccaaggagcg aattaggctg ccagtcgtac taatcgccgg
      361 tgggcgggaa gaacagtatc gctcgtgcct cgttgtctca gcttcggcca tcgcgcaggt
      421 agcggcccgc tgacgccgag aatgcaggcg cgccggcaaa gtagatttcg atggcctcgg
      481 cgcaggcgta ggcccgctga tggtgcccta tccggccggc gtggtcggcc ggtacgtcac
      541 cctcgtgcca cggcccgcgg gcatggcggt gatcgtcgag cctcgccgtt ggtcgcgcca
      601 aaccttccca gccgcctgcc gatcctcgac aggttggccc tggatgccca ggagaaggcc
      661 ggagatcatc gcgaagtcgg cgtcggtaaa cagcaccgtc gtctcggaca gaccgccggc
      721 gccattgaag gtgaaggcga cggaagccgg catgcccagc atctgcgtgg atggaacaaa
      781 aatcgatggt tggccgccgc ttggcgtccg cgcacaggcg ggcgcgtcgg gacggcaagg
      841 cacggcttgg ccactgctcg cgctgactat ttgcgattgg ctcaggcccc actcggcata
      901 ctgccaccag gcgtgggcag gcatggcgcc ggcgaagacg gtgcaggcga cggcaatcaa
      961 tccgcgagac aggttcatga gagcgccctc catccactcc gccgtcctac ccgcacctgc
     1021 aacgcgcgtc ggcttctcac ggtcaaatgc gttagaccac gtgttgaagt ctgcttgagc
     1081 cgcggcgaga ggatagttca attggttggg gcggttgata ccgtcttgat gtctggatcg
     1141 attctggcgt ctggcgccag ctgcatttgc cgacacagtt cattgccccg atgaatagtc
     1201 gatcatgccg ccagctcaaa tttctgacct tgattttggt caaggatgag gctggccaac
     1261 gatcctatag acttgctagt tagatcgcgc tgcttgatgc aatgcgaggg ggctttagac
     1321 catgcgaggc acgtcccgcg ctctggcgtt agtggcgacc gcctgcgcgc ttgccattcc
     1381 ctcggccaga ggccagtcca cgccgacccc gctcgctgtg cttgtgcagc ccgccgaggt
     1441 ccgtccgctt gccagccagc gcgaattcat cgggcgggcg caagccgccg acaaggtcga
     1501 tctacgcgcg cgggttcagg gtttcctcgg agctcgccgg ttcgcggacg gcgacatggt
     1561 gaaagaaggc caagttctgt tcgtgatcga gcccgagcct taccaggccg aggtcgagca
     1621 gaaggagggg cagcgggcgg cggctgccgc caccctcatc aacgccgagc tgcagtacaa
     1681 gcgcgccgat gaactggccc gcaccaatgt cggcacccag gccgtgcgcg acataaggct
     1741 ggccgagctc gaacaggcgc gggggacctt gaagcaaacc gatgcggcgt tgcgcgacgc
     1801 caagatcaag ctttcctata ccgaggtcaa atcgccgatc aatggccggg tcggacgcgc
     1861 cgcggtgtcg cccggcaacc tggttggatc ggaaaccggc atcctgacga cggtcgtcgc
     1921 cgagcagccc atgcgcgtgg tcttttcggt gacccagcgc gagctgcttg aggcccgccg
     1981 cggcggctca tcgggagggt cgctcaaggc ccgtatccgg ctcgccgatg acagcctcta
     2041 cgacgaggag ggcacgctcg atttcatcga cgtgcaggtc gacccgcgca cggatggcca
     2101 aacgttgcgg gcgactttcc ccaacgccgc tcgcgccctg accgaaggcc agacggtgcg
     2161 ggttatcctc gaagagaaga aagcggcgga gttcgtggtc gtgccgctgt cggtgattgc
     2221 caacgaccag accgggccct acctctttgt ggtcggcgcc gataacaagg ccgagcagcg
     2281 acgcatcaag ccgggcatcg agcgcgacgg catgatcgcc atcgaagacg gcctaaaggc
     2341 gggtgacaag gtcatcgtgc agggccagca gcgggtgcgg ccgggcatgg tggtcgcgcc
     2401 cgagcttgca ccggccgcca ctcccgcggc ccagccgtcg cggtgagtcg atgacgatct
     2461 cctcgctgtt catcaaccgt ccacggcttg ccttcgtgat ctccgcggtg atcacgatcg
     2521 ccggcctgat cgcgatccag gccctgccgg tggcgcagtt ccccgacatc gtgccgccgc
     2581 aggtgaaggt caccgccacc tataccgggg catccgcgac cgtggtcgaa tcgaccgtgg
     2641 cgcaggtcat cgaggccgag gtcaacggcg tcgagcgcat gatctacatg aagtcgaatt
     2701 cgggcggcga cggcagctac gcgctgaccg tgagcttcgc cgtcggctcc gatccggacc
     2761 tcaacaccgt caacgtcacc aatcgggtaa atcaggcgct cgcgcggctg ccgccggaag
     2821 tccagcgcaa cggcgtcatc gtcaagaagc agtcgtcggc gctgctgcag ctcattgccg
     2881 tccattcccc aaagggcagc cgggacggcc agttcctgtc gaactacgcc accatcgaga
     2941 tgctggacat gctgcggcgc gtgcccggcg tcggcgacgc ggtgttgttc gggccgctcg
     3001 actacgccat gcgggcctgg gtctcgctcg accgcatggc aagcctcgac atctcgacgg
     3061 atgacgtcgt caaggccatc cagtcgcaga acatccaggc cgccgtaggc cgcgtcggcg
     3121 ccgcaccgct gatgggaccg gtcgaattcg agctcaacat caccacgcaa gggcggctgt
     3181 cgagcatcaa ggagttcgag gacatcgtcg tgcgcaccaa cgcgcagggc accgtcgtgc
     3241 ggctgaagga cgtggcgcgg ctggaactcg gcgccaagac cagcgactcc gtcgggcgat
     3301 acaacggcaa gcccgctgcc ggcatccaga tctaccagct gcccggcgcc aatgcgctgg
     3361 cgacagccag gggcgtgcgc gaggcgttga aggagctcga tccgctgctg ccccaggacg
     3421 tcgcctacga catcatgtac gacacgaccg tgttcgtaga ggccaccatc gaaagcgtca
     3481 tccacacgct gttcgaagcc ttcgtgctcg tcggcatcgt cgttttcatc ttcctcggca
     3541 atctgcgcgc caccctgatc cccatcatcg ccgtcccggt cgccctggtc ggcacattcg
     3601 cggtgatgct ggcgctaggc ttttcggcca acactgtctc gctgctggcg ctggtgctgg
     3661 ccatcggcat cgtcgtcgac gatgccatcg tcgtggtcga ggccgtcgag cacatcctgg
     3721 agaccgagcc tgatctgacg ccggcccaag ccaccgaaaa ggccatgagc caggtcaccg
     3781 ggccgatcat cgccatcacc ctggtgctac tctcggtctt catcccgacg gcgttcattc
     3841 cgggcatcgc cggccagatg tatcagcagt tcgccgtggc ggtctccgcg tcgatggtga
     3901 tctcggccct caatgcgctg tcgctgtcgc cggcgctctg ctcgctgatc ctgcgccacc
     3961 gcaccaagaa gggcggcctc atcgcgcgcc tgcacaaggg catcgaccac acgcgcgacg
     4021 gctacgtccg cctggcgacg cctttggccc gacggtcgat cattgccggc ctgctcgcct
     4081 tggccttcat cgtcgccacc ggcggcatgg cgcggatcgt gccgacgggg ttcctgccca
     4141 acgaggacca gggcgccttc atgggcgaga tccaactgcc ggacgcggct tccaccaacc
     4201 gcacgctggc ggtggtcgag caggtcgagg gcatcatcga ggccaagccg tggctgcaga
     4261 acctgttcac cgtcagcggc tacagcatgc tggacggcct gaacctgcct aaccgcgcct
     4321 tcttcgtcgc cgccctcaag ccgttcgacg agcgcaaggc atccgacatg tcggtgttcg
     4381 ccgccctgaa gcagctgaac gaggagttcc gccgcgtcgc cgtcgcgacg atcattccgt
     4441 tcaacctgcc gccgatcatc ggtctcagca cctcggccgg attcgagttc cagctggtca
     4501 gccgcaccgg tgcatcgccg gccgacatgg cggcgacggc gcgcgggctg gtcgtggcgg
     4561 cgcaaggcga gccggccctc gcaggcgtct acacgaccta cggcgcctcg accccgcaga
     4621 tctacctcga tctcgatcgc gagcgggcgc agatcctggg cgtcgatatc gccgaagtgt
     4681 tcaatgccct gcagacggcg atgggcggct actacgccaa cgacttcaac ctgttcggcc
     4741 gcacctggca ggtgaaggtc caggccgacg cggcggaccg gcggtcggcg cgcgatatct
     4801 atcgcgtgcg cattcgcacg gccgacggcg agctcatccc gttgcgcgcg gtggcggaga
     4861 tccgcctggt gaacgcgccg tcccaggtca ttcgctacaa caaccttcgc tccgtcacca
     4921 tcaacggcgg acccgcgccg ggctactcct cgggccaggc gatgcaggcg atggaaaccc
     4981 tcgccaagcg cgtccttccg gcagggttcg gctttcaatg gaccggaacg gcgttccagg
     5041 agaaggcggc cgcgggccag accgccgcca tcctggtact ggcgctggtc ttctcctacc
     5101 tcttcctggt cgggctctat gagagcacgg ccattcccat ggcggcgctg ttgtcgatct
     5161 cggccgggct gttcggcgcc atggccggcc tgctgctgag cggcctggac aacaacctgt
     5221 tcgcccagat cggaatcgtc gtgctgatcg cgctcgccgc caagaacgcc atcctgatcg
     5281 tcgagttcgc gatggagcag cgacgccagg gcaaggacat cgtgcatgcc gcgaccgaag
     5341 ccgcggcgct gcgcttccgc gccgtgatga tgacctcctt cgccttcatc ttcggcctgg
     5401 tgccgctggt gatcgcgacg ggcgccggcg cggcgaccca acgtgcggta ggtaccgcgg
     5461 tgttcggcgg catgattgcg gcaagctgcc tgggcatctt tgtcataccc gggctgtacg
     5521 tcctgtttca gacgctgcgc gagaagatca agctcgtggt gtcacgaggc ccaagcaaga
     5581 aagcaccgct cttgtaacgc cgtcgatccg atgccgggga attactcggc gacccctgtc
     5641 tcgatcgacc gatgcgctgg cgacgcggtc gccgcaaacc gatgctcgat ggagccctat
     5701 agcgtcgcct tttggacctt gccgatgctc cgcaggcgat cgtaatcgaa aatcatcacc
     5761 tcgtcgcttc cgacaagccc gatgacgccg cgcttcttga gcttgccgat tgaacgactg
     5821 actgtttcaa tcgtcagccc gagatagtcg gcaatgtctc cccgacccat gtgcagggac
     5881 aagggcttca ccgagacgtg ccgctcgcgg taaagcgcgt cgatctcggc gaggaagtgc
     5941 gcaacgcgct ctgtcgagct tagctggccg agcaccagca tcgcttcgcc agtctgcttc
     6001 aaggcatcgg aaagtgtctc ggccaaggcc gctgcaaggt cggggtgctg ggctgcaaaa
     6061 gcgtcgaact tgtgccgatc gaaaccgcag gtctcgacat cggtcagagc ctcgccttcg
     6121 aaagcgtagg cgccggctgt gtcgacatat cccacacagt cgccgggcat cctgatggcg
     6181 atgatctgcc ggcgaccgtc atccagcgcg cgcgaaacgg ccaccatccc ctttctgatc
     6241 ttgaagaacg atccgatcgg atcgcccgcc cggaatatcg tctcccgcct tttccattgc
     6301 cggatggagc cgagggcgag catctgctcg aggcgggcgt cgtcgagcgg cttgcaaaga
     6361 ttgagcgacc tgccgggaca ttgatcgcac ggcaagccaa gggcgggcgg accccggctt
     6421 cttgcggagc cgtcacgctg tcgaggcaaa cgggacgcgc cacgattcac aatggatgca
     6481 aagtatcacg accatggggt gatttaccac ccatgcgcgc ggctggggat tccgctgcct
     6541 tcagcggtcg gggctcacgt tccgtcagcg ttggccggtg tcgacacgct cgtagctcat
     6601 cgcctttcgt agtacctcga agatcacggc cgtcgaccaa ccgaacatca gtacgccgca
     6661 catcgccgtc gccgggccca gcatccgcca tccgctgacc ggtatgacat cgccgtagcc
     6721 gagggtcgtg tagttcacga aggcaaagta cagcgtgtcc gctccttcag gcgcagcgcc
     6781 gacgatgtca taggtgcttg cccagacggc cacctctatc acgtgggcga ccatcagcac
     6841 cgacacggcg gcaatcatgg tcgcgatcat aagcaacgtc ggtcgcactg ccgtccgggc
     6901 ggcaaccgcc cgtgccacgc gcaccacgat ggtcatgatg gaagcgtgga tcgcgatgca
     6961 gagcacgctc gcgacgagga tcgcgagagc ctgcgggagg gtcaccgtgc caaccgtctc
     7021 gggactgcgg ccgtgcctac gacttcaatc gtgcccctga acagcgctcg tcgtgaagca
     7081 aggttggcga ccgcaaccaa ggtcaccccc agctcagcgt gacgcccaca tcgcccggca
     7141 tgccgcccgg gaagtcgatg atttcgtatc ggatgtgata gccgttcggc ttcagacggc
     7201 gctgccagaa ctcgtaaagt tccctgggaa tgccggtcag ggtcttctcc caaccgacct
     7261 ctgcctgatt gatcgcccgt ccattgtcgg tgcaaagcgt gtggggaaaa cgcagcacct
     7321 gcaccgacgt cattccgttt ccgactgcgc ggctgatgat tatcgttgcc ttttcgatga
     7381 tctcgtcgtc gctcatgccg gacggcttgc tgagccggtc cagaagcgcc ttcttctcgg
     7441 cctccgcggc ctcgtgcgcc ttgaaggcgg ccgaagcctt ttcaccttcg atttgtgcga
     7501 tcgtgatctg caattccttt accgtcggga gcttggccat ctgtcaccta cctttgcgtg
     7561 gatgcctcgc aaacgcccct tgcggtggct acccgtattt gtcggcgacg agtcgccggc
     7621 ctttcagcga tgcctgatcg tcgtactttc tcttgtgaga gcggtcgggg agcttcgcct
     7681 cggcacgttc gatgcgcttg taggggattt gcgacaggat gtgtgaaatt gcgttcagcc
     7741 gtgcccgacg tttgtcattc gaatcgacga tgtaccatgg tgttgcgtcg gtgtcggtgt
     7801 attcgaacat cacgtcgcgg gccttggagt agtcgtacca gcgcctgtat gatacgagat
     7861 ccatcgggct cagcttccac tgccgcagcg gatcctcgat gcgcgccatg aaacggcgct
     7921 cctgctcctc ctgaccgacc tccaaccaga tcttgatcag gcggataccg ccgtcgacga
     7981 cgaacttctc gacgagcggg cagagctcga ggaagcgctt gtgctgctcc ggcgtgacga
     8041 agcccatgac atgctcgacg ccggcgcgat tgtaccagct gcgatcgaag atcacgatct
     8101 cgccgcccgc cgggaaccgc tcgatgtagc gctgcatgaa catttgcgtc ttgtcgcggt
     8161 cggagggagc cggcagggcg acgacccgga agactcgcgg actgacccgc gccgtgatcg
     8221 ccttgatcag gccgcccttg cccgccgcgt cgcgtccctc caggacgatc atcgcgcgct
     8281 cgctcgtcga cttgacccaa tcctgcagaa aacaaagctc gacctggagc tttttcagct
     8341 ccttctcgta taccttccgc ttgagctgct cccggccacc cttggacatt ttctctctcc
     8401 atccctggcc aaggctagcg cgtgacggca ggcggtccct tgattttggt caagagacga
     8461 aggatggggc ccgcttcgtt tagctgtctc gccgagacgc tcaggacatc aggcgcgttt
     8521 cttgcctaga atggaccatg ctgctggcgc aaatctccga tctgcacgtg cggccgaccg
     8581 gcaagctcta caaggacgcg gtcgattcca accgcatgtt cgccgaggcg atcgatcacc
     8641 tcaatcgcct cgacccccga cccgacctgg tgctgatcac cggcgacctg gtcgacgagg
     8701 ggctgaaggc cgaatacgac tcgttgcgcg ccctgctggc cgggctcgaa ccgccccatc
     8761 tcctgatggc gggcaatcac gacgaccgcg agatgctggc gcggtccttt cccgatcacg
     8821 cctatctgcc ggcgaccggc gccaagcatt acctcatcga ccgccatccg gtgcgcatcg
     8881 tggcgctcga cacgaccgtg ccgggcgacc atcacggcga gatcgacgag gcagggctgg
     8941 cttggctcga aagagcgctg caagccacgc gcggggcgcc gaccgtcgtg ctgatgcatc
     9001 atccgccgat cgcctgcggc attccctacc tcgacaagta catgtgccgg cggccggagc
     9061 gcatcgccgc ggtgatcggc cggttctccc atgtcgagcg cgtgctgtgc ggccatgtcc
     9121 atcggccgat cctgcagcgc tgggcgggca ccctgctgtg ctgctgtccg agcacggcga
     9181 cacaaattgc cttgcaactt cgacctgatg cccgaccggc gtccttccgc gagccgccgg
     9241 cctgcctgct ccactggtgg cgcgacggtg tgatggtgac gcacacgagt tacatcggcc
     9301 gcttcgacgg gccctatccg ttcgcttgat cacgtgtcgt tcagtttcaa gctcctctcc
     9361 cccgctaggg ggagaggttg ggtgaggggg atgcgtacgt cgttgccccc tcacctagcc
     9421 tctcccccga gcggggggga gaggaacatg agtctgagcg cgcgagacgc gcgcggtccg
     9481 gaagaggcat gaggtggcat tg
//
LOCUS       DASWGA010000233         4244 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_408340, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000233 DASWGA010000000
VERSION     DASWGA010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4244
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408340"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..257)
                     /locus_tag="VF991_05670"
     CDS             complement(<1..257)
                     /locus_tag="VF991_05670"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX9555962.1"
                     /translation="MKAITVEPGTANSVRLEERPEPPPDPASLLVQMTVLGVCGTDRE
                     IVAGSYGWSPPGSKRLVLGHESLGRVLEAPDESNFSPGDLVV"
     gene            379..1146
                     /locus_tag="VF991_05675"
     CDS             379..1146
                     /locus_tag="VF991_05675"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HEX9555963.1"
                     /translation="MTAKLYAMTCGRLVGRLKDMIEGEDGQVALPIPSYLIEHAKGRA
                     LFDTGMHPQCRTDAAGRLGERVARIFGFEHYGADDDVKSRLESIDRDPGKVDFIVNSH
                     LHFDHVGGNQLVPNATMVVQKREWQAAQDPETAAKVGFYKADFDHGHAVRQVEGEHDL
                     FGDGSVVCIPTYGHTPGHQSLKVRTEKGEIVLTGDACYFCRTLRERRLPRFVYDREQM
                     LASLDRLEALEKGGAKLFFGHDPDFWKDVPQAPVPAF"
     gene            complement(1263..2018)
                     /locus_tag="VF991_05680"
     CDS             complement(1263..2018)
                     /locus_tag="VF991_05680"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9555964.1"
                     /translation="MEISARDIDHLSLTLSDPEAAAIRLQQLGFNLTPQGVEPRCICF
                     QPDQDDVPNYVELLQGHPASVAVALNVAELEGEERTHAWETEDGFEVDAGVVVGESGG
                     PLPWFPVRHETPDAFMEPEWIVHPNGALGLMAVHAVAETPREVAKALAQSWSGRVEEI
                     FDGCMLVKTGSVELLIWAPLAYQLEYKALEVMAPEQLPAVVGATVAVERARPLQALLR
                     ANNVPFALTEGDRVLVAPEQTGGPLMIEFLPQT"
     gene            complement(2101..2493)
                     /locus_tag="VF991_05685"
     CDS             complement(2101..2493)
                     /locus_tag="VF991_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX9555965.1"
                     /translation="MATLRKEIPVANGAAPVWHALRDFGQVHTKVAPGFLTGLRMDNG
                     DRIVTFFNGLVARERLVTADDETCRLVYAVVEGRASHYNAAVQVFPEGDGSRIVWTID
                     LLPNELAPAIEGMMDQALETMKKTLAAA"
     gene            2606..3640
                     /locus_tag="VF991_05690"
     CDS             2606..3640
                     /locus_tag="VF991_05690"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX9555966.1"
                     /translation="MRFGLIGYGAWGRYHADAIAKAPGAELAAIACASEATAAIARQR
                     HPTATVHVDWRQLLADRSIDAVDIVVPNHLHADIAIAALEAGKNVLLEKPMAASIADC
                     DRIVEAVRRTGKVLSVGHEFRASTQWGLIHRMIRDGEIGEPLYANVSLFRFPYRQGAD
                     GWRYDANRVGSWILEEPVHFFDMLMWWFEGLGDPHVVHGFGNAKDGPIRGMYDNFSAV
                     MRWPSSTGTGAFAVVTQTLAGFEHHHVVEVVGREGSIRAWWSGVMDRTADPRHELKVK
                     RRGRTQSEIVELGPSGEVFELEEELAATVRAFESGKPLVSAEEARKRIIVCLEAERAV
                     AEGREIALKF"
     gene            3659..>4244
                     /locus_tag="VF991_05695"
     CDS             3659..>4244
                     /locus_tag="VF991_05695"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9555967.1"
                     /translation="MKRRTLMKGAVVAGSTLATPAYLRAQSSKKLSILTWNIADQQEL
                     FKVEFAEFKAANPGVEIEWLDKKGPDLPAFYQTQIVAGTPPDIVDLQGAIWVDYAAKG
                     GLVDLTPYLQKEPDVAKRFNADYLNGWVYQGKTYLLPFYVAKTLLYYNKTMFKEAGLA
                     GPPQSFGELVGFSEKMAKAEKTGFLTLNFDWLYWP"
BASE COUNT          734 a         1376 c         1402 g          732 t
ORIGIN      
        1 acgacgaggt cgccgggcga gaaattgctc tcgtccggcg cctcgagcac gcgccccagc
       61 gattcatgcc cgagcaccag ccgcttgctg ccgggcggcg accagccgta gctgccggcg
      121 acgatctcgc ggtcggtgcc gcagacgccc agcaccgtca tttgaaccag aagactggcc
      181 ggatcgggcg gcggttcagg ccgctcctcg aggcgcacgg agttggccgt gccgggttcg
      241 acggtgatgg ctttcaagat ttgtcatcgt cggggaagct gccgacgcgt cctgtcttgc
      301 gtggtggcat gccatggaaa acgccggccg cgcggcggcg gttccctgtg ctaggcttgc
      361 ctgaggaagc gaggaacgat gacggcgaag ctttacgcca tgacctgcgg ccgcctggtc
      421 ggccggctga aggacatgat cgagggcgag gacggacagg tggcgctgcc cattccgtct
      481 tatctgatcg agcatgccaa ggggcgcgcc ttgttcgaca ccggcatgca tccgcagtgc
      541 cgcaccgacg ccgccgggcg gctgggcgag agggtggcgc gcatcttcgg cttcgagcat
      601 tacggtgcgg acgacgacgt gaagtcgcgc ctggaatcga tcgaccgcga ccccggcaag
      661 gtcgacttca tcgtcaattc ccacctgcat ttcgaccatg tcggcggcaa ccagctggtg
      721 cccaacgcca cgatggtggt gcagaagcgt gaatggcagg cggcgcagga tcccgagacc
      781 gcggccaagg tcggcttcta caaggccgac ttcgatcatg gccatgcggt gaggcaggtc
      841 gagggcgagc acgacctgtt cggcgacggc agcgtggtgt gcatccccac ctatggccac
      901 acgcccggtc atcagtcgct caaggtccgc accgaaaagg gcgagatcgt gctgaccggc
      961 gacgcctgct acttctgccg caccttgcgt gagcggcgcc tgccgcgctt cgtttacgat
     1021 cgcgagcaga tgctggcgtc gctcgaccgc ctcgaagctt tggagaaggg cggggcgaag
     1081 ctgttcttcg gccacgatcc cgacttctgg aaggacgtgc cgcaggcgcc ggtccccgcg
     1141 ttctagcgct tgctcttccg gaccgcgggc gtcccgcccg ctcatgatca tgagcgcgcg
     1201 agacgcgcgc ggtccggaag accatgattc catccaattg gaacgtgcta ggcggcggcc
     1261 gctcaggtct gcggcaggaa ttcgatcatc agcggcccgc cggtctgttc gggcgccacc
     1321 agcacgcgat cgccctcggt caaggcgaag ggcacgttgt tggcgcgcaa cagcgcttgc
     1381 agcggccgag cccgttcgac cgcgacggtg gcgccgacca ccgccggcaa ctgctcgggc
     1441 gccatgacct cgagcgcctt gtattcaagc tggtaggcaa gcggcgccca gatcaaaagc
     1501 tcgaccgagc cggtcttcac cagcatgcag ccatcgaaga tttcctcgac cctgccgctc
     1561 cacgactggg cgagcgcctt ggcgacctcg cgcggggtct cggccacggc gtggactgcc
     1621 atcaggccga gcgcgccatt gggatggacg atccattccg gctccatgaa ggcgtcgggc
     1681 gtctcgtgtc gcaccggaaa ccacggcagc ggcccgccgc tctcgcccac caccacgccg
     1741 gcgtcgactt cgaaaccatc ctcggtttcc cacgcatgcg tacgttcctc gccctccagc
     1801 tcggccacgt tcagggccac ggcaacgctt gccggatggc cctgcagcaa ttcgacgtag
     1861 ttaggcacgt cgtcctgatc gggctggaag cagatgcagc gcggctcgac gccctgcggc
     1921 gtcaggttga agccgagctg ctgcagccgg attgcggcgg cctccggatc ggagagggtg
     1981 agcgaaagat gatcgatgtc gcgggccgaa atctccatgc ccgctcatac aggcttaacc
     2041 gtgctccgct caagctcatg ttcctctccc ccgatagggg cagaggttag gtgagggggc
     2101 tcaagccgcc gccagcgtct ttttcatggt ttccagcgcc tgatccatca tcccttcgat
     2161 cgccggggcg agctcgttgg gcagcaggtc gatcgtccac acgatgcggc tgccgtcgcc
     2221 ttcgggaaag acctggaccg cggcgttgta gtggctggcg cggccctcga cgaccgcata
     2281 gaccagccgg caggtctcgt cgtcggccgt caccagccgc tcgcgcgcca ccaggccgtt
     2341 gaagaaggtg acgatgcgat cgccgttgtc catcctgagg ccggtcagaa agcccggcgc
     2401 caccttggtg tggacctggc cgaagtcgcg caacgcgtgc cagaccgggg cggcgccgtt
     2461 cgctaccggg atttcctttc tgagagtcgc catgtcgtgt ctcctttgtt gcgaccgaca
     2521 atggcgagcg aggcggcggt ggtctggcgg ttttcggaca tggtcgccct cggtttgagc
     2581 tatcgtgcgg tcaaaggggg agggcatgcg tttcggtctg atcggttacg gcgcctgggg
     2641 tcgctatcat gccgatgcga tcgccaaggc gcccggcgcc gaactggcgg cgatcgcttg
     2701 cgcgagtgaa gccaccgccg cgatcgcgcg ccaacgccat ccgacggcca cggtccatgt
     2761 cgattggcgt caactgctcg ccgaccgttc gatcgacgcc gtcgacatcg tcgtgcccaa
     2821 tcacctgcat gccgacattg cgatcgccgc cctcgaggcc ggcaagaacg tgctgctgga
     2881 aaagccgatg gccgcctcca tcgccgactg cgaccgcatc gtcgaggcgg tccggcgcac
     2941 gggaaaagtc ctgagcgtcg gccacgaatt ccgcgcctcc acgcagtggg gcctgatcca
     3001 tcgcatgatc cgcgacggcg agatcggcga gccgctttac gccaatgtga gcctgttccg
     3061 cttcccctat cgccagggcg cggatggctg gcgctatgac gccaaccgcg tcggatcgtg
     3121 gatcctggaa gagccggtgc atttcttcga catgctgatg tggtggttcg aggggctggg
     3181 cgacccgcac gtcgttcatg gcttcggcaa tgccaaggat gggcccatca ggggcatgta
     3241 cgacaatttc tcggccgtca tgcgctggcc gagttcaaca gggactggcg ccttcgccgt
     3301 cgtgacgcaa accctggcgg gcttcgagca tcaccatgtc gtcgaagtgg tcggccggga
     3361 gggttcgatc agggcctggt ggtcgggcgt catggaccgc acggccgatc cccggcacga
     3421 gctcaaggtg aagcgccgcg ggcgcaccca gagtgaaatc gtcgagctcg gtccctcggg
     3481 agaggtcttc gagcttgagg aagaacttgc cgcgaccgtg cgcgccttcg agagcggcaa
     3541 gccgctggtc tcggctgaag aggcgcgcaa gcgcatcatc gtctgcctgg aagctgaacg
     3601 cgccgtggcg gagggcagag agatcgcgct aaaattctga aaacaagtgg aggaaatcgt
     3661 gaaacgcaga acgctcatga agggggcggt cgttgccggc agcacacttg ccacgcccgc
     3721 ttatcttcgc gcccagtcgt cgaagaagct cagcatcctc acctggaaca tcgccgacca
     3781 gcaggagctg ttcaaagtcg agttcgccga attcaaggcg gccaacccgg gtgtcgagat
     3841 cgaatggctc gacaagaagg gccccgacct gccggccttc taccagaccc agatcgttgc
     3901 cggcacgccg cccgacatcg tcgacctgca gggcgcgata tgggtcgact acgcggccaa
     3961 gggcgggctg gtcgacctca cgccctatct gcagaaggag cccgacgtcg ccaagcgctt
     4021 caacgcggac tacctcaacg gctgggtcta ccagggcaag acctacctgc tgccgttcta
     4081 tgtcgccaag acgctgctct actacaacaa gacgatgttc aaggaggcgg ggctggccgg
     4141 cccgccgcag agcttcggcg agcttgtagg cttttccgag aagatggcga aagcggagaa
     4201 gaccggcttc ttgacgctca acttcgactg gctctactgg ccat
//
LOCUS       DASWGA010000234         2937 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1034671, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000234 DASWGA010000000
VERSION     DASWGA010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2937
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1034671"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..1445)
                     /gene="atpD"
                     /locus_tag="VF991_05700"
     CDS             complement(21..1445)
                     /gene="atpD"
                     /locus_tag="VF991_05700"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018235852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEX9555968.1"
                     /translation="MATNNIGTITQITGAVVDVRFDADLPNILNALRVDSGGRKLVLE
                     VAQHLGESEVRTIAMDTTDGLVRGEKAVDTGGPIAMPVGPETLGRILNVIGEPVDERG
                     PVNNKQTLPIHRNAPAFVEQSTEAQILATGIKVVDLLAPYAKGGKIGLFGGAGVGKTV
                     MIMELINNVAKAHGGVSVFAGVGERTREGNDLYHEMIESGVIKLDGPGSKVALVYGQM
                     NEPPGARARVGLSGLTVAEYFRDAEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVG
                     YQPTLSTDMGALQERITSTKKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRS
                     IAEMAIFPAVDPLDSTSRMLDPRIVGEEHYQVALSVQRVLQQYKSLQDIIAILGMDEL
                     SEEDKLVVARARKIQRFLSQPLHVAEVFTGTPGVFVKLEDTIKGFKGIVAGDYDELPE
                     SAFYMVGTIDEAVAKAKKLAAEAA"
     gene            complement(1481..2368)
                     /locus_tag="VF991_05705"
     CDS             complement(1481..2368)
                     /locus_tag="VF991_05705"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEX9555969.1"
                     /translation="MPSLKTYRLRIRSVQSTQKITKAMKMVAAAKLRRAQEQAMAARP
                     YAEAMDKILASLAASFTGGTGPRLLAGTGSDQVHLLIVATADRGLCGAFNSSIVREAR
                     RAIRALTAEGKTVKVLAVGRKGRDQLRRDFAGNIVETITDLGRPRVGFADARKVAARV
                     MQMFEAGEFDVASVVFNRFKSAMTQIVTRQQLIPPPAPEGTQTAAPATVGGAVYEFEP
                     DEGEILADLLPRNLTVQIFRVLLENAASFYGSQMTAMDSASRNAGDVIKDLTLQMNRS
                     RQASITKELIEIISGAEAI"
     gene            complement(2386..>2937)
                     /locus_tag="VF991_05710"
     CDS             complement(2386..>2937)
                     /locus_tag="VF991_05710"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110364.1"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; the alpha chain is a
                     catalytic subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEX9555970.1"
                     /translation="VIETQAGDVSAYIPTNVISITDGQIFLEAELFYAGIKPAINVGL
                     SVSRVGSAAQIKAMKQVAGTMKLELAQYREMAAFAQFASDLDASTQRLLARGQRLTEL
                     LKQGQYAPMPVEEQVVSIYAGTRGFLDTLPVASIGEFERQALDALRAEGSMLASIRDK
                     REIVKETDDKLKAFFADFVKKFA"
BASE COUNT          444 a          950 c         1024 g          519 t
ORIGIN      
        1 aggagatctt ggccatcggt tcaggccgct tcggccgcga gcttcttggc cttggcgacg
       61 gcctcgtcga tcgtgcccac catgtagaag gcggattccg gcagctcgtc gtagtcgccg
      121 gcgacgatgc ccttgaagcc cttgatcgta tcctcgagct tcacgaacac gcccggcgtg
      181 ccggtgaaca cctcggcgac atggagcggc tggctgagga agcgctggat cttgcgcgcg
      241 cgcgccacca ccagcttgtc ctcttccgaa agctcgtcca tgccgaggat ggcgatgatg
      301 tcctgcagcg acttgtactg ctgcagcacg cgttgcaccg acagcgccac ctggtagtgc
      361 tcctcgccga cgatgcgcgg atcgagcatg cgcgaggtcg aatcgagcgg atcgacggcc
      421 gggaagatcg ccatctcggc gatcgagcgg ctgagcacgg tggtcgcgtc gagatgggcg
      481 aacgaggtgg cgggcgcggg gtcagtcaag tcgtcggccg gcacgtagat cgcctgcacc
      541 gaggtgatcg accccttctt ggtcgaggtg atgcgctcct gcagcgcgcc catgtcggtc
      601 gacaaggtcg gctgatagcc caccgccgag gggatgcggc ccaggagcgc cgacacttcc
      661 gagcctgcct gggtgaaacg gaagatgttg tcgacgaaga acagcacgtc ctggccttcg
      721 gcgtcgcgga agtattcggc gaccgtcagg cccgacaggc cgacgcgggc gcgcgcgccc
      781 ggcggctcgt tcatctggcc gtagaccagc gccaccttgg agcccggccc gtcgagcttg
      841 atgacgcccg attcgatcat ctcgtgatag aggtcgttgc cctcgcgggt gcgctcgccg
      901 acgcccgcga acaccgacac gccgccatgc gccttggcga cgttgttgat caactccatg
      961 atcatcacgg tcttgccgac gccggcgccg ccgaacaggc cgatcttgcc gcccttggcg
     1021 tagggcgcga gcaggtcgac gaccttgatg ccggtggcca ggatctgcgc ttccgtcgac
     1081 tgctcgacga acgcgggtgc gttgcgatgg atcggcaggg tctgcttgtt gttgacgggc
     1141 ccgcgctcgt cgaccggctc gccgatcacg ttcaggatgc ggccgagcgt ctccggcccg
     1201 accggcatgg cgatcggtcc gccggtgtcg accgccttct cgccgcgcac caggccgtcg
     1261 gtggtgtcca tggcgatggt acggacctcc gattcgccca gatgctgggc gacttccagc
     1321 accagcttgc ggccgccaga atcgacgcgg agcgcgttca ggatattcgg caggtcggcg
     1381 tcgaagcgca cgtcgacgac cgcgcccgtg atctgggtga tcgtgccgat attgttggtg
     1441 gccatacgga tccctttcct tcgattgcgc ggcagccggc ctagatggcc tcggcgccgg
     1501 agatgatctc gatgagttcc ttggtgatcg aggcctgacg cgaacggttc atctgcaagg
     1561 tcaggtcctt gatcacgtcg ccggcgttgc gcgaggcgct gtccatcgcc gtcatctgcg
     1621 agccgtagaa gctcgccgca ttctccaaga gcacgcggaa gatctgtacg gtgaggttgc
     1681 gcggcagcag gtcggccagg atctcgccct cgtcgggctc gaactcgtag accgcgccgc
     1741 ccaccgtggc gggagcggcg gtctgcgtgc cctcgggggc cggcggcgga atgagctgct
     1801 ggcgggtgac gatctgcgtc atcgccgact tgaagcggtt gaagaccacc gaggcgacat
     1861 cgaactcgcc ggcctcgaac atctgcatga cccgcgccgc cactttccgg gcatcggcga
     1921 agccgacacg cggccggccg aggtcggtga tggtctcgac gatgttgccg gcgaagtcgc
     1981 ggcgcagctg gtcgcggccc ttgcggccga ccgccagcac cttgaccgtc ttgccctcgg
     2041 cggtgagcgc gcggatggcg cggcgcgcct cgcgcacgat cgagctgttg aacgcgccgc
     2101 acaggccgcg gtcggcggtg gcgacgatca ggagatggac ctggtcggag ccggtgccgg
     2161 ccagcaggcg cggaccggtg ccgcccgtga agctcgccgc cagcgaggcc aggatcttgt
     2221 ccatggcttc ggcatagggc cgggccgcca tggcctgttc ctgggcccgc cggagcttgg
     2281 ccgccgccac catcttcatc gccttggtga tcttctgcgt cgactggacg ctgcggatcc
     2341 tgaggcggta ggtctttagg ctgggcatcg agacctgcgg aagctttagg cgaacttctt
     2401 gacgaagtcg gcgaagaacg ccttcagctt gtcgtcggtc tccttgacga tctcgcgctt
     2461 gtcgcggatc gaggcgagca tcgagccctc ggcgcgcagc gcatcgaggg cctggcgttc
     2521 gaactcgccg atactggcga ccggcagggt gtcgaggaag cctcgggtgc cggcgtagat
     2581 cgagacgacc tgctcctcga ccggcatggg cgcgtactgg ccctgtttca ggagctcggt
     2641 caggcgctgg ccgcgcgcca gcaggcgctg ggtcgaggcg tcgagatccg aggcgaactg
     2701 ggcgaacgcc gccatctcgc gatactgcgc cagctcgagc ttcatggtgc cggcgacctg
     2761 cttcatcgcc ttgatctggg ccgccgagcc gacgcggctc accgacaggc cgacgttgat
     2821 cgcgggcttg atgccggcgt agaacagctc agcctcgagg aagatctggc cgtcggtgat
     2881 cgagatcacg ttggtcggga tgtaggccga gacgtcgccg gcctgggtct cgatgac
//
LOCUS       DASWGA010000235         7832 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2434205, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000235 DASWGA010000000
VERSION     DASWGA010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7832
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2434205"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(360..1925)
                     /locus_tag="VF991_05715"
     CDS             complement(360..1925)
                     /locus_tag="VF991_05715"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEX9555971.1"
                     /translation="MTVARCVTALLALVCLSGCMVGPNYQRPPPADPPPLAFKETTGP
                     VIGAAADFQPAQPRDAIDRGPWWAMYGDPVLDRVAAQIDISNQTLMQAEAAYRQARAL
                     VRQDASGLYPTISGNAGFTQSGSGTGGGRSTQGGLVNTGGGSISQFTMGSSLSWEIDL
                     WGRIRRQIESDSAAAQASAADLANARLSAQANLAINYFSMRIAEQQIKLFEASVAAFT
                     RSLQIVQNQVDAGTASRLDLAQAQTQLEQTRAQLVGANINRATFEHAVAILVGKAPAE
                     FSLEPGPPPPEVPTLDAGVPSTLLERRADIAAAERLMASANAQIGVTQAAFYPNISLA
                     SSVTLVGGTFIALLQLSNAIWSVGPQLAATLIDGGALKAQVEGARAKYDGQVATYRQT
                     ILVAFQQVEDALVQQRVLIQQEQVQRAAVAAAREAEQLSLNQYTQGTVAYTTVVTTQT
                     AALSAEQTLLSIRLSRLTASANLVLALGGGWRDTDLPAPMPIGGLDQTPQPPMPTTQS
                     LSPQRQWWKFWSR"
     gene            complement(1922..5197)
                     /locus_tag="VF991_05720"
     CDS             complement(1922..5197)
                     /locus_tag="VF991_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9555972.1"
                     /translation="MNLSAPFIARPVATTLLTVGLALAGLVAFLKLPVSPLPKVDFPT
                     IQVSASLPGASPETVATSLTTPLERALGAIAGVTEITSSSTVGNSRITLQFDLSRSID
                     GASRDVQAAVNAARMDMPSDLPSNPQYRKINPADAPVLVAALTSETLGQGRLYDAASN
                     VLQQKLSQVSGVGQVTLGGSSLPAVRVEINPTTLSKYQIGLESVRAALAAANANSPKG
                     ALEIGDRRFQIYSNDQARIAAEYRDLIVAWRNGSPVRLSDVAEILDSTENIRNEGQAN
                     GKRSVLVIIYLQPNANVIETVDQIKALLPELQAALPNDVDLQVVADRTTTIRASLKEV
                     ERALIISVILVVLVTFAFLRSARAGFVASVAVPVSLIGTFGGMYLLGYSLNNLSLMAM
                     AIAAGFVVDDAIIVLENISRHIEAGMSRIEAALLGAREVGFTVVSMSLSLIAVFIPIL
                     LMGGIVGRLFREFAVTLTIAIVISMVVSLTTTPMMCAYVLRPHSVRPPGRFFRASERG
                     FAALQSFYDRSLGLVLRHPLVTILIFLATVILNIDLYVTIPKGFFPQQDTGRIIAGIR
                     ADQSISFQAMRRKFRQFMQIVQEDPDIASVAGFTGGFSTNSGFLFASLKPLGERKLSA
                     DQVIARLRPKLNQVAGANLFMQAVQDIRVGGRQSNSQYQFTLQADSLSDLYTWGPKLL
                     EALRADQSVVTDVDSDQQQRGLQVNLTIDRDAAARLGVNTRSISSTLYDAFGQRQVST
                     IYNALNQYHVVMEVSPEFWQNPEALKDIYVSTSGGAIGGAQATGAIVSTAPLQAGAVD
                     PTQAVRNQRTNQIAVSGRGSASTGAAVSTSPETMIPLQSVTRYEFGTTPLAVNHQGLF
                     VASTISFNLVPGKTLSDAIAFVNDTMREIGVPSTIHGSFQGTARAFQQSLDNQLLLIL
                     AALAAVYIVLGILYESYIHPITILSTLPSAGIGALLALRLTGVELSIIAMIGVLLLIG
                     IVKKNAIMMIDVALERERNEGLDPREAIHQAAVLRFRPILMTTMAAMLGALPLALGFG
                     DGAELRQPLGISIIGGLFVSQILTLYTTPVIYLYLDRFRRRDRDRPSRVARVMGSAGA
                     APA"
     gene            complement(5194..>7832)
                     /locus_tag="VF991_05725"
     CDS             complement(5194..>7832)
                     /locus_tag="VF991_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019860903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9555973.1"
                     /translation="KISQLPGVGLVSLEGGQKPGVRIRANPTALAAYGLNVDDLRTTI
                     SNANVNTPKGNFDGPARAYTINANDQVTDPATFRDIVVAYRNGAPVRVSDVATVEEAQ
                     ENNRLVAWVNSTQAVIVNVRRQPGANVIAVVDNIKALLPQLRETLPNSLDVAIITDRT
                     ITIRASVRDVQIELTFAVVLVVAVIFLFLGDWRATLIPSLSVPLSLIGTLAVMYLAGF
                     SLNNLSIMALTIATGFVVDDAIVMIENIARYIERGDDPKEAALRGSSQIAFTVVSLTV
                     SLIAVLIPLLFMSDVVGRLFSEFAVTLSVTILISAVVSLTLVPMMCAQLLRRRPGQPH
                     GEAEALGARWFGRLIAVYDRCLVVVFRHQPLTLAIAVATIVLTVVLYIVVPKGFFPIQ
                     DTGLIQAVTEASQSVSFEAMSERQRALADAILGDPDVESLTSFVGVDGTNPTLNSGRM
                     LINLKPRSTRSASASQIIRRLAGETANVQGISLYMQPAQDLTIDSTVSRTQYQFVLES
                     AKPEDFDAWVPRLMERLQRVPQIADVTSDLQAKGLSLFIKIDRDAAARFGITAASVDN
                     VLYDAFGQRIVSTVYTQSNQYRVIYEVEPSMARSVDSLANLYLPGSGGKQVPLSAIAT
                     FEERQAPLRIDRLGQFPATTISFNLAPGAALGEAVDAITAAQHEIGMPASITTHFQGA
                     ALAFQKSLNSQLLLILAAIVTVYIVLGVLYESYIHPITILSTLPSAGIGALLALMIAG
                     DDLSVVAIIGIVLLIGIVKKNAIMMIDFALDAERNEGKAPLEAIHQACLLRFRPILMT
                     TVAALVGALPLMVGSGTGSELRHPLGLTIVGGLIVSQVLTLFTTPVIYLAFDRIGRRL
                     RGVPLDTPLYPVRSDAEERPQP"
BASE COUNT         1303 a         2491 c         2808 g         1230 t
ORIGIN      
        1 tgatcaacgc cgtgaagatc accctgccgc ggccgcgccc ccaaggcggc atcggcgaga
       61 ccgacatgca cgccgcccag cagcacgtgc cgttgcagga gatccgcgtg ccatggccgg
      121 cgccgtgatg cgccgccgcg ccctgctggc cggcacggcg gcgttcggcc tcgccggccg
      181 gtcctggggt caagcctcgg gccaggcctg gccgaggacg gcgtgatcgc cgtcggcggc
      241 acgccgcagg ccttcatggc caccatccgc gccgaggtcg agcgctggca gaccttcatc
      301 gaccgcacca agatcaagct cgactaggcg gcgcgccact ccagtggcac gcccccagct
      361 caacgcgacc agaacttcca ccactgccgt tgcggcgaga ggctttgcgt cgtcggcatc
      421 ggcggctgag gcgtctggtc gaggccgccg atcggcatgg gcgccggcag gtcggtgtcg
      481 cgccagccgc cgcccagcgc caggaccagg ttggcgctgg ccgtcagccg gctgagacgg
      541 atactgagca gggtctgctc ggcgctcagc gcggcggtct gggtggtcac caccgtcgtg
      601 taggccacgg tgccctgcgt gtactggttg agcgacagct gctcggcttc gcgcgccgcg
      661 gcgacggcgg cgcgttgcac ctgctcctgc tggatcagca cgcgctgctg gaccagcgca
      721 tcctcgacct gctggaaggc gaccaggatg gtctgccggt aggtcgcgac ctggccgtcg
      781 tatttcgccc gggcaccctc gacctgcgcc ttgagcgcgc cgccgtcgat cagggtggcg
      841 gccagctgcg ggccgaccga ccagatggcg ttgctgagct gcagcagcgc aataaaggtg
      901 ccacccacca aggtgacgct gctggcgagc gagatgttgg gatagaaggc cgcttgcgtc
      961 acgccgatct gggcgttggc cgacgccatc aggcgctcgg cggcggcgat gtcggcccgc
     1021 cgctcgagca acgtcgacgg cacgcctgcg tcgagggtcg gcacctccgg cggcggcggg
     1081 cccggctcca ggctgaattc cgccggcgcc ttgccgacca gaatggcgac cgcatgctcg
     1141 aacgtggcac ggttgatgtt cgcgccgacg agctgggcgc gggtctgctc gagctgggtc
     1201 tgcgcctgcg caaggtccag ccgcgaggcg gtgccggcat cgacctggtt ctgcacgatc
     1261 tggagcgagc gcgtgaacgc ggccaccgag gcctcgaaga gcttgatctg ctgctcggcg
     1321 atgcgcatcg agaagtagtt gattgcgagg ttcgcctgcg ccgacagccg cgcattggcg
     1381 agatcggcgg cactcgcctg agccgccgcc gagtcgcttt cgatctgccg gcggatgcgg
     1441 ccccacaagt cgatctccca gctaagcgac gagcccatcg tgaactggct gatgctgccc
     1501 ccgccggtgt tgacgaggcc gccctgggtg ctgcggccgc cgccggtgcc gctgccgctt
     1561 tgcgtaaagc cggcgttgcc cgaaatcgtc ggatagagac ccgacgcgtc ctgccgcacc
     1621 agcgcccgcg cctggcggta ggccgcttcg gcctgcatca gcgtctggtt ggagatgtcg
     1681 atctgggccg ctacccgatc gagcaccgga tcgccgtaca tcgcccacca tggcccgcga
     1741 tcgatggcat cgcgcggctg ggcgggctgg aagtccgcgg ccgcgccgat caccggtccc
     1801 gtcgtctcct tgaaggcaag cggcggcgga tcggccggtg gcgggcgctg gtagttcggg
     1861 ccgaccatgc agcccgagag gcagaccagg gcaagcagcg ccgtgacgca acgggcgacc
     1921 gtcatgccgg cgcggctcct gcactaccca tgacgcgcgc cacgcggctc ggccggtcgc
     1981 ggtcgcggcg acggaagcgg tcgagataga gatagatcac cggcgtggtg tagagggtga
     2041 ggatctggct cacgaacagc ccgccgatga tcgagatgcc gagcggctgg cgcagctcgg
     2101 cgccgtcgcc gaacccgagc gccagcggca gcgcccccag catcgccgcc atggtcgtca
     2161 tcaggatggg ccggaagcgc agcacggccg cctggtggat ggcctcgcgg ggatcgagcc
     2221 cctcgttgcg ctcgcgctcc agcgccacgt cgatcatcat gatggcgttc ttcttgacga
     2281 tgccgatcag cagcagcacg ccgatcatgg cgatgatgct gagctccaca ccggtgagcc
     2341 tgagcgccag cagcgcgccg atgccggccg acggcagggt cgacaggatc gtgatcgggt
     2401 ggatgtagct ctcatagagg atgccgagca cgatatagac ggcggcgagc gcggccagga
     2461 tcaacaggag ctggttgtcg agcgactgct ggaaggcccg cgccgtgccc tggaacgagc
     2521 cgtggatggt cgagggcacg ccgatctcgc gcatcgtgtc gttcacaaag gcaatggcgt
     2581 cgctcagcgt cttgccgggc accaggttga acgagatcgt gctggcgacg aacaggccct
     2641 ggtgattgac ggcaagcggc gtcgtgccga actcatagcg cgtcaccgac tggagcggaa
     2701 tcatcgtctc cggcgacgtg ctgacggccg ccccggtcga tgccgagccg cggccgctga
     2761 cggcgatctg gttggtccgc tggttacgca ccgcctgcgt cggatcgacg gcgcccgcct
     2821 gcagcggcgc cgtcgacacg atggcgccgg tcgcctgcgc gccgccgatc gcaccgcccg
     2881 acgtgctgac atagatgtcc ttcagcgcct cgggattctg ccagaactcg ggcgagacct
     2941 ccatgaccac gtgatactgg ttcagcgcat tgtagatggt cgagacctga cgctggccga
     3001 acgcgtcgta gagcgtcgac gagatgctgc gggtgttcac gccgagccgg gccgccgcgt
     3061 cgcggtcgat cgtgagattg acctgcaggc cgcgctgctg ctggtcggaa tcgacgtcgg
     3121 tgacgaccga ctggtccgct cgcagcgctt ccagcagctt gggtccccaa gtgtagaggt
     3181 cggacagcga atcggcctgc agggtgaact ggtactgcga attgctctgg cggccgccga
     3241 cccggatgtc ctgcaccgcc tgcatgaaaa ggtttgcgcc ggccacctgg ttgagcttgg
     3301 gccgcaagcg ggcgatcacc tggtcggccg acagcttgcg ctcgccgagc ggcttcaggg
     3361 aggcgaacag gaagccggaa ttggtcgaaa agccgccggt gaagcccgcg acgctggcga
     3421 tatcgggatc ctcctgaacg atctgcatga attgccggaa cttccgacgc atggcctgga
     3481 acgagatgct ctggtcggcg cggatgccgg cgatgatgcg gccggtatcc tgctggggga
     3541 aaaaaccctt ggggatcgtc acgtagaggt cgatgttgag gatcaccgtc gccaggaaga
     3601 tcaggatcgt caccagcgga tggcgcagca ccaggccgag gctgcggtcg tagaagcttt
     3661 gcagggcggc gaagccgcgc tcgctggcgc ggaagaagcg gccgggcggc cgcacgctgt
     3721 gcggccgcag cacataggcg cacatcatgg gcgtggtggt gagcgacacg accatggaga
     3781 tcacgatggc gatggtgagc gtgaccgcga actcgcggaa cagccggccg acgatgccgc
     3841 ccatcagcag aatcgggatg aacaccgcga tcagcgacag gctcatcgag accacggtga
     3901 agccgacctc gcgggcgccc aggagcgccg cttcgatgcg cgacatgccg gcctcgatat
     3961 gccgggagat gttctccagc acgatgatgg cgtcgtcgac cacgaagccc gcggcgatcg
     4021 ccatggccat cagcgacagg ttgttgaggc tgtagcccag aagatacatg ccgccgaagg
     4081 tgccgatcag cgagaccggc acggcgaccg aggcgacgaa gccggcgcgc gccgagcgca
     4141 ggaaggcgaa ggtcaccagc accaccagga tgacactgat gatcagcgca cgctcgactt
     4201 ccttcagcga cgcgcgaatg gtcgtggtgc gatcggcgac gacctgcaga tcgacatcat
     4261 tgggcagcgc cgcctgcagc tccggcagca gcgccttgat ctggtcgacg gtctcgatga
     4321 cgttggcgtt gggctgcagg tagatgatca ccagcaccga gcgcttgccg ttggcctggc
     4381 cctcgttgcg gatgttttcg gtcgaatcga ggatctcggc cacgtccgac aggcgcaccg
     4441 gcgagccgtt gcgccaggcg acgatgagat cgcggtactc cgcggcgatt cgcgcctggt
     4501 cgttggaata gatctggaag cgccggtcgc cgatctcgag ggcgcccttg ggcgaattgg
     4561 cattggccgc cgcgagtgct gcccgtacgc tttccaggcc tatttgatac ttcgacagcg
     4621 ttgtcgggtt gatctcgacc cggacggcgg gcagcgaact gccgcccagc gtgacctggc
     4681 cgacgccgct cacctgactc agcttctgct gcaggacgtt ggaggcggcg tcgtagaggc
     4741 ggccctggcc cagggtctcg gaggtgagtg ccgcgaccag gaccggggca tcggcgggat
     4801 tgatcttgcg gtactgcgga ttgctcggca ggtcgctcgg catgtccatc cgcgcggcat
     4861 tgacggcggc ctgcacgtcg cgcgacgccc cgtcgatgct gcgcgagagg tcgaactgca
     4921 aggtgatgcg cgagttgccg acggtgctcg acgaggtgat ctcggtgacg ccggcaatgg
     4981 cgccgagtgc cctttcgagc ggcgtcgtca ggctggtggc gacggtttcc ggcgaggcgc
     5041 cgggcaggct ggccgagacc tggatggtcg gaaaatcgac cttgggcagc ggcgacaccg
     5101 gcagcttcag gaaggcgacc aggccggcga gcgccaggcc caccgtcaag agcgtggtgg
     5161 cgaccggccg ggcgatgaag ggagccgaca ggttcacggc tgaggcctct cctccgcgtc
     5221 gctgcggacc ggatagagcg gcgtgtcgag cggcacgccg cgcagccgcc ggccgatgcg
     5281 gtcgaaggcg agatagatca ccggcgtggt gaacagcgtc agcacctggc tcacgatcag
     5341 gccgccgacg atggtgaggc ccagcggatg gcgcagctcc gagccggtgc cgctgcccac
     5401 catcagcggc agagcgccga ccagggccgc gaccgtggtc atcaggatcg gccggaagcg
     5461 cagcaggcag gcctggtgga tcgcctcgag cggcgccttg ccctcgttgc gttcggcatc
     5521 gagggcgaag tcgatcatca tgatggcgtt cttcttgacg atgccgatca agagcacgat
     5581 gccgatgatg gcgacgacgc tgagatcgtc gcccgcgatc atcagcgcga gcaaggcgcc
     5641 gatgccggcc gacggcaggg tcgacaggat cgtgatcgga tggatgtagc tttcatagag
     5701 cacgcccagc acgatgtaga ccgtgacgat ggcggctagg atcagcagca actggctgtt
     5761 gagcgacttc tggaaggcca gagcggcacc ctggaagtgc gtcgtgatcg aggccggcat
     5821 gccgatctcg tgttgcgcgg cggtgatggc gtcgaccgct tcgccgagcg cggcgccggg
     5881 tgccaggttg aacgaaatgg tggtggccgg gaactggccc agccggtcga tccgaagcgg
     5941 cgcctggcgt tcctcgaagg tggcgatggc cgacaatggc acctgcttgc cgcccgaccc
     6001 gggcaggtag aggttggcca gcgaatcgac cgaacgggcc atcgacggct cgacttcgta
     6061 gatcacccga tactggttcg actgggtata gaccgtcgac acgatgcgct gaccgaaggc
     6121 gtcgtagagc acgttgtcga ccgaggcggc ggtgatgccg aagcgcgcgg cggcatcgcg
     6181 gtcgatcttg atgaacagcg acaggccttt ggcctgcagg tcgctggtga cgtcggcgat
     6241 ctgcggcact ctctgcagcc gctccatcag gcgcggcacc caggcgtcga aatcctccgg
     6301 cttggcgctt tccagcacga actggtactg cgtgcggctc accgtcgaat cgatggtgag
     6361 gtcctgggcc ggctgcatgt agagcgagat gccctgcacg ttcgccgtct cgcccgccaa
     6421 gcgccggatg atctggctcg ccgaggcgct tctggtgctg cgcggcttga ggttgatcag
     6481 catgcggccg gagttgagcg tcgggttggt gccgtcgacg cccacgaacg aggtcaggct
     6541 ctcgacatcg ggatcgccga gaatggcatc ggccagcgcg cgctggcgct cgctcatcgc
     6601 ctcgaacgac acgctttgcg acgcctcggt gacggcttga atcaggccgg tatcctggat
     6661 ggggaagaag ccctttggca ccacgatgta gagcaccacc gtgagtacga tggtggcgac
     6721 cgcgatcgcg agcgtcagcg gctgatggcg gaacaccacg accaggcagc ggtcgtagac
     6781 ggcgatcagc cgtccgaacc agcgcgcgcc caacgcctcg gcttcgccat gcggctgccc
     6841 cggccgccgg cgcaggagct gggcgcacat catcggcacc agggtgagcg agaccacggc
     6901 cgagatcagg atggtgacgg agagcgtcac ggcgaactcg ctgaacaggc ggccgacgac
     6961 gtcgctcatg aacaacagcg ggatcagcac ggcgatcagc gacacggtga gcgacaccac
     7021 ggtgaaggcg atctggctcg acccccggag tgcggcctcc ttcggatcgt cgccgcgctc
     7081 gatatagcga gcgatgttct cgatcatgac gatggcgtcg tcgaccacga aaccggtggc
     7141 gatggtgagc gccatgatcg agaggttgtt gaggctgaag cccgcgagat acatcaccgc
     7201 cagcgtgccg atcagcgaca gcggcaccga caggctggga atcagcgtgg cgcgccagtc
     7261 gccgaggaac aggaagatca cggcgacgac caggacgacg gcaaaggtga gctcgatctg
     7321 cacgtcgcgc accgaggcgc ggatggtgat cgtgcggtcg gtgatgatcg cgacgtcgag
     7381 cgagttcggc agggtctcgc gcagctgcgg cagcagcgcc ttgatgttgt cgacgacggc
     7441 gatgacgttg gcgccgggct ggcgccggac gttcacgatc accgcctggg tcgagttcac
     7501 ccaggcgacc agccggttgt tctcctgcgc ttcttcgacg gtcgcgacat cggacacccg
     7561 caccggcgcg ccgttgcgat aggcgacgac gatgtcgcgg aaggtcgcgg gatcggtgac
     7621 ctggtcgttg gcgttgatgg tgtaggcccg cgccggcccg tcgaaattgc ctttgggcgt
     7681 gttgacgttg gcgttggaga tcgtcgtgcg cagatcgtcg acattgaggc cgtaggccgc
     7741 gagcgcggtc gggttggcgc ggatgcgcac gccgggcttc tggccgccct ccaggctgac
     7801 caggccgacg ccgggaagct gggagatctt ct
//
LOCUS       DASWGA010000236         6318 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2173689, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000236 DASWGA010000000
VERSION     DASWGA010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6318
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2173689"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2002)
                     /gene="leuS"
                     /locus_tag="VF991_05730"
     CDS             complement(<1..2002)
                     /gene="leuS"
                     /locus_tag="VF991_05730"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEX9555974.1"
                     /translation="MSSTPARYNFRETEVKWQKVWDDRQTFRARMDRARPKYYVLEMF
                     PYPSGRIHMGHVRNYTQGDVIARYKRARGFNVLHPMGWDAFGLPAENAAMEKKVHPKK
                     WVYENIATMKAQLKVMGLSLDWSRELASCDPSYYRHQQKMFLDFWKAGLAYRKEAWVN
                     WDPVDHTVLANEQVIEGKGWRTGAPVERRKLTQWNFKITQFADELLERLDTLERWPEK
                     VRLMQANWIGKSRGARVFWQLTDAAGADRGKLEIFTTRPDTLYGASFAALSPEHPLVA
                     ELAEKDPGLQRFVAESRKTGTAAAEVETAEKVGYKLPLLAKHPLMPGKTLPVYAANFV
                     LMEYGTGAIFGCPGHDERDHEFAVKYGLPIIPVVMPKDADPKSFSVAEAAFVEDGVII
                     NSDFLNGLDVEQAKARVIARLEEIGVGQGTTQYRLRDWLVSRQRYWGCPIPAIHCASC
                     GVVPVPEKDLPVELPEDVDFDKPGNPLDRHPTWKHVACPQCGGPAQRETDTFDTFIDS
                     SWYFDRFTSPQLETAPFDREEDNYWMPVDQYIGGIEHAILHLLYSRFWTRAMREVQMT
                     SRDEPFDGLFTQGMVLHETYRATDGTWLLPEEVERTPSDKGGGGTIVRASDKSPVEVG
                     RSEKMSKSKKNVVDPDQIIHDYGADTARWFMLSDSPPERDLEW"
     gene            complement(2097..2612)
                     /locus_tag="VF991_05735"
     CDS             complement(2097..2612)
                     /locus_tag="VF991_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3576 domain-containing protein"
                     /protein_id="HEX9555975.1"
                     /translation="MTACGGNPNAVKENEGRNATKAQSQRDMIQGLGGRNREDGTLFG
                     PGGIFGSKADKQADTGTGTGVAVNAYLWRASLDTINFIPLASADPFGGVIITDWYTPA
                     ETPNERMKVQVTILDRELRADGVRVSVFKQQTSPKGGTWVDAQVDPRTNIDIENAILT
                     RARQLRIAGGS"
     gene            3088..4452
                     /locus_tag="VF991_05740"
     CDS             3088..4452
                     /locus_tag="VF991_05740"
                     /inference="COORDINATES: protein motif:HMM:NF024996.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEX9555976.1"
                     /translation="MKKLLLGSTALVVGGVMAAPAMAADPIKIGVGGYYTFYGAAGNI
                     DPTYALNGTFTSYKGFSIIQEGEIHFIGQTKLDNGTSVGITVELEGWDPSSATANAQI
                     DEAFLFAFGDWGRMELGSRDAATYRMYYGTPSAFIGWGAIQHNHNYINASVQANNKGY
                     ARTMATTITPTWQDVNRVNYFTPRFAGLQIGIGYAPKLNASATNTPGMISGPGNGAGI
                     CGYNNATNINNCPTADYAWQDLFDVGANYLNKFGDFTVALYGAFAYASFVPGFQPFAG
                     AANMVTGANLSAWKQWVAGAQFGFAGFTVGGAVGWDNNGLGGNYYTGVDNDTRFYTAG
                     VMYETGPWQMSAMWAGFWNTNGNGSSNVTNIATGTQVQTLSAANATGNPFSGNSTYFS
                     NNPSTQGLFGAEVVQKWEVGANYALGPGIKAVGGFMYYNAYGPSNAVVANSWVIMLGM
                     DLRF"
     gene            complement(4583..5347)
                     /locus_tag="VF991_05745"
     CDS             complement(4583..5347)
                     /locus_tag="VF991_05745"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX9555977.1"
                     /translation="MNTAGGGAASQAKGELRVVGTTVSREVELLLDRVAEAVGRRAPR
                     VLQVGSRPLVSDRNERNWRSLVAKRFGSRARFIGIDLQDGANVDHVLDICSGPKAIKA
                     ALGEEPFDLVVCCHVLEHTRRPTKAARNIESALRPGGVAYISTPWSQAFHATPDDYWR
                     FSVRGLMLMFERLEVLSSFYSGGDVGLDVAYRVVRDGKPELDPRAGAVEQGLFQLVLD
                     HEDNRAVLARQATERLPVSRTYLPTLFVNIVGQRLE"
     gene            complement(5344..6033)
                     /locus_tag="VF991_05750"
     CDS             complement(5344..6033)
                     /locus_tag="VF991_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LUD domain-containing protein"
                     /protein_id="HEX9555978.1"
                     /translation="MTDAPNQANRAAILNGIRRSLHRGELAGAARQAVEARLAQPPHG
                     PAVKRANLDQPAKVALFCQWAEANNATVARVAPAEVPGEVAAYLARNNLPAQAAIAPS
                     PQLAGYDWASQKMLSLRRGRGEATDQVSITGAFAGIAETGTLVMASGPEHPVTLNLLP
                     DTHIAVLRESDIVGGYEEVWDRLRAGYGKDRMPRTVNTITGPSRTGDIEQTIELGAHG
                     PRRVHIVVVRE"
     gene            complement(6030..>6318)
                     /locus_tag="VF991_05755"
     CDS             complement(6030..>6318)
                     /locus_tag="VF991_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lactate utilization protein LutB
                     domain-containing protein"
                     /protein_id="HEX9555979.1"
                     /translation="IPLPRLMRHWREREFERHLTPRAARQGLALWSFIARRPRLYRAL
                     TALANRALSLFGRAEGRFHTLPLAGAWTRFRDFPAPPAGGTFHAQWSRRRP"
BASE COUNT         1062 a         2030 c         2085 g         1141 t
ORIGIN      
        1 tccattcgag gtcgcgctcg ggtggcgagt ccgacagcat gaaccagcgc gcggtgtcgg
       61 cgccgtagtc gtggatgatc tggtccgggt cgacgacgtt cttcttcgac ttggacatct
      121 tctccgagcg gccgacctcg accggactct tgtcggaagc gcgcacgata gtgccgcccc
      181 cacccttatc gctgggcgtg cgctcgacct cttccggcag caaccaggtc ccgtcggtgg
      241 cgcggtaggt ctcgtggaga accatgccct gggtgaacag cccgtcgaac ggttcgtcgc
      301 ggctggtcat ctgcacctcg cgcatggcgc gggtccagaa gcgcgaatag agcagatgca
      361 ggatcgcatg ctcgatgcca ccgatatatt gatcgaccgg catccagtaa ttgtcctcct
      421 cgcggtcgaa cggcgccgtc tcgagctgcg gcgaggtgaa gcggtcgaag taccagctcg
      481 aatcgatgaa ggtgtcgaac gtgtcggtct cgcgctgggc ggggccgccg cactggggac
      541 aggcgacgtg cttccaggtc ggatggcggt cgagcggatt gcccggcttg tcgaaatcga
      601 catcctcggg cagctcgacc ggcaggtcct tttccggcac cggcacgacg ccgcagcttg
      661 cgcaatggat ggccgggatc gggcagcccc agtagcgctg gcgcgacacc agccagtcac
      721 gcaggcggta ttgcgtcgtg ccctggccga cgccgatctc ttccagtcgg gcgatgacgc
      781 gggccttggc ctgctcgacg tcgaggccgt tcaggaagtc ggagttgatg atcacgccgt
      841 cttcgacgaa cgccgcctcg gcgacgctaa aactcttggg atcggcgtcc ttgggcatca
      901 ccaccggaat gatcggcagg ccgtacttga ccgcgaattc atggtcgcgc tcgtcgtggc
      961 cggggcagcc gaagatcgca ccggtgccgt actccatcag cacgaagttg gcggcataga
     1021 ccggcagggt cttgcccggc atcaatggat gcttggccag cagcggcagc ttgtagccga
     1081 ccttctccgc ggtctcgacc tcggccgcgg cggtgccggt cttgcggctt tcggcgacga
     1141 agcgctgcag gcccggatcc ttctcagcca gctcagcgac cagcggatgt tcgggcgaca
     1201 gcgccgcgaa ggaagcgcca tagagcgtgt cgggccgcgt ggtgaagatt tccagcttgc
     1261 cgcgatcggc gcccgcggca tcggtgagct gccagaacac gcgcgcgccg cggctcttgc
     1321 cgatccagtt ggcctgcatc aggcggactt tttcaggcca gcgctcgagc gtgtcgaggc
     1381 gctccagcag ctcgtcggcg aattgcgtga tcttgaagtt ccactgcgtg agcttgcgcc
     1441 gctcgaccgg cgcgccggtg cgccagccct tgccctcgat cacctgctcg ttggccagca
     1501 cggtatggtc gacagggtcc caattgaccc acgcctcctt gcggtaggcg agtccggcct
     1561 tccagaaatc caggaacatc ttctgctggt ggcgatagta ggacggatcg caggacgcga
     1621 gttcgcggct ccagtcgagc gacaggccca tcaccttgag ctgcgccttc atggtcgcga
     1681 tgttctcgta gacccatttc ttgggatgga ccttcttctc catggccgcg ttctcggccg
     1741 gcaggccgaa ggcgtcccag cccatgggat gcagcacgtt gaaaccgcgg gcgcgcttat
     1801 agcgggcgat cacgtcgccc tgggtgtagt tgcggacgtg gcccatatgg atgcgccccg
     1861 atgggtaggg gaacatctcc agcacgtagt atttgggccg cgcgcggtcc atgcgggcgc
     1921 ggaaggtctg gcggtcgtcc cagaccttct gccatttgac ctcggtttcg cggaaattgt
     1981 agcgcgctgg cgtcgacgac acggtgtgat cccaaaaaag cgattctagc ccagaaaaga
     2041 ctggggccgc agcggatgcc cgctgcggcc ccgatcgtca agcgttgtga tcggctttaa
     2101 gagccgccgg cgatgcgcag ctggcgggcc cgcgtcagga tggcgttttc gatatcgatg
     2161 ttggtgcgcg gatcgacctg cgcatcgacc caggtgccgc ccttgggcga ggtctgctgc
     2221 ttgaacaccg agacccgcac gccatcggcc cgcaattcgc ggtcgaggat ggtgacctgg
     2281 accttcatgc gctcgttggg cgtctcggcc ggggtgtacc agtcggtgat gatgacgccg
     2341 ccgaacggat cggccgaggc cagcggaatg aaattgatgg tgtcgagcga ggctcgccac
     2401 agataggcgt tcaccgccac cccggtgccg gtgccggtat ccgcctgctt gtcggccttg
     2461 gatccaaata tgccgcccgg gccgaacaag gtgccatctt cgcggttgcg cccgcccagg
     2521 ccctggatca tgtcgcgctg gctttgggct ttggtggcgt tacggccctc gttctccttg
     2581 acggcattag ggttgccgcc gcaggcggtc acgcccaggg agagaactcc ggctgaaatt
     2641 acaagaaatc ggaggagatt gttcgagccc ggcatcgttg gcgttcctgt ccccgtttgg
     2701 ccacgacatc acagcggcgt ggctggactt taaagcacag tgtcggtgaa ctgcaagcgg
     2761 ccggatatcg caccataaca agttcttttt gaggactata ggtatagtcc tatcatgcaa
     2821 ctaaatgctg ttttgccgct gaaaacagtc gtgccgccgg catccggctt tgtcagcaaa
     2881 ccgttcaaat tgtgacaaag acgccacagg tgcggggaga atcgtgcagc ggcgcgtcca
     2941 tttcttgacc ctcgttgggc ctaagtgttt ttatagctcg accgttctgg cggggtctgt
     3001 gttgctgtgt ttcgggcttt caccttccgc cggtcggaca ggcctttggg tacgtaccag
     3061 tctctgatca atgagagagg gagaatgatg aaaaagcttc tactcggctc gaccgccctg
     3121 gtggttggcg gcgtaatggc cgccccggcc atggcagccg acccgatcaa gataggcgtc
     3181 ggtggctact acaccttcta cggtgcggcc ggcaatattg accccaccta tgccttgaac
     3241 ggcacgttca ccagctacaa gggtttctcc atcattcagg aaggtgaaat ccacttcatt
     3301 ggccagacga aactggacaa cggtacctcg gttggcatca ctgtcgagct ggaaggctgg
     3361 gatccgagct cggcgacggc caacgcgcag atcgacgaag ccttcctgtt cgccttcggc
     3421 gactggggcc gtatggagct gggttcccgt gacgcggcga cttaccgtat gtattacggc
     3481 acgccgtcgg cgttcatcgg atggggcgcc atccagcaca atcacaacta catcaatgcc
     3541 tccgttcagg ccaacaacaa gggctacgcc cgtaccatgg cgacgacgat cacgccgacc
     3601 tggcaggacg tcaatcgcgt caactacttc acgccgcgct tcgccggcct gcagatcggt
     3661 atcggctatg cgcccaagct gaacgcttcg gcgacgaata ccccgggcat gatcagtggt
     3721 cctggcaacg gcgccggtat ctgcggctac aacaacgcca ccaacatcaa caactgcccg
     3781 accgccgact atgcctggca ggatctgttc gacgtcggcg ccaactacct gaacaagttc
     3841 ggcgacttca cggtggctct gtacggcgcc ttcgcctacg cctcgttcgt gcctggcttc
     3901 cagccattcg caggcgccgc gaacatggtg acgggtgcca acctgtcggc gtggaagcag
     3961 tgggtggccg gtgctcagtt cggcttcgcc ggcttcacgg tcggtggcgc cgtcggctgg
     4021 gacaacaacg gcctgggcgg caactactac actggcgtcg acaacgacac ccgcttctac
     4081 accgcgggcg tcatgtacga gaccgggccg tggcagatgt cggcaatgtg ggccggcttc
     4141 tggaacacca acggcaacgg ctcgtcgaac gtgacgaaca tcgcgacggg cacccaggtc
     4201 cagacactca gcgcggcgaa cgccaccggc aacccgttct cgggcaacag cacctacttc
     4261 agcaacaatc cttcgaccca aggactgttc ggcgccgaag tcgtgcagaa gtgggaagtc
     4321 ggcgccaact acgcgctcgg accgggcatc aaggcggtcg gcggcttcat gtattacaac
     4381 gcctacggcc cgagtaatgc cgtggtcgct aattcctggg tgatcatgct gggcatggac
     4441 ctgcgcttct agtcgcagtc ccaactcgac aatcggaaga gcgggcgaaa gcccgctctt
     4501 tctttttgcg ggcactaact ccggataccc cagggcggca tccagagttt cgacatccaa
     4561 ggttttggcg gcccgccggc ccttattcca ggcgctgtcc gacgatattg acgaacaaag
     4621 tcggcaggta ggtgcgcgac accggcaggc gctcggtcgc ctggcgggcc agcacggcgc
     4681 gattgtcctc gtggtcgagc acgagctgga acaggccctg ctcgacggcg ccggcccgcg
     4741 gatcgagctc gggcttgccg tcgcgcacca cgcggtaggc cacgtccagc ccgacatcgc
     4801 cgccgctgta gaacgacgag agcacctcga gccgctcgaa catcagcatc aggccgcgca
     4861 ccgagaagcg ccaatagtcg tcgggcgtgg catggaaggc ctgcgaccaa ggcgtcgaaa
     4921 tataggcgac gccgcccggc cgcagtgcac tttcgatgtt gcgcgccgcc ttggtcggcc
     4981 ggcgggtgtg ctcgagcacg tggcagcaga ccaccaggtc gaacggctcc tcgccgagcg
     5041 cggccttgat cgccttgggc ccgctgcaga tgtcgagcac atggtcgacg ttggcgccat
     5101 cctgcaggtc gatgccgatg aaccgggcgc ggctgccgaa gcgcttggcc accaggctgc
     5161 gccagttgcg ctcgttgcgg tcggagacca gcggccgcga acccacttgc agcacgcgcg
     5221 gtgcgcgccg gcccaccgcc tcggcgacgc ggtcgagcag cagctcgacc tcgcggctca
     5281 ccgtcgtgcc gacgacgcgc aattccccct tggcttgcga agcagcgccg ccgccggccg
     5341 tgttcattcg cgcaccacca caatgtgcac gcgccggggg ccgtgcgcgc caagctcgat
     5401 ggtctgctcg atgtcgccgg tgcgcgacgg gccggtgatg gtgttcacgg tgcgcggcat
     5461 gcggtccttg ccgtagcctg cgcgcaggcg gtcccagacc tcctcgtagc cgccgacgat
     5521 gtcgctttcg cgcagcacgg cgatgtgggt gtcgggcagc agattgagcg ttaccggatg
     5581 ctcggggccc gacgccatca ccagcgtgcc ggtctcggcg atgccggcaa aggcgccggt
     5641 gatcgagacc tggtcggtgg cctcgccgcg gccgcggcgc agcgacagca tcttctggct
     5701 tgcccagtcg tagcctgcga gctgcggtga gggggcgatc gcggcttgcg ccggcaggtt
     5761 gttgcgcgcg agataggccg cgacctcgcc cggcacctcg gccggcgcca cgcgcgccac
     5821 cgtggcattg ttggcttccg cccattggca gaacagggcc accttggcgg gctggtcgag
     5881 gttggcgcgc ttgaccgccg gaccgtgcgg cggctgggcc agccgcgctt ccaccgcctg
     5941 gcgcgcggcg cccgccagtt cgccgcgatg cagggatcgg cggatgccgt tcaggatcgc
     6001 cgccctgttg gcctgattcg gggcatcggt catggccgcc tgcggctcca ttgagcatgg
     6061 aacgtgccgc ctgcgggggg cgcggggaag tcacgaaaac gcgtccaggc gccggccagg
     6121 ggcagcgtgt ggaagcgacc ttcggcacgg ccgaacagcg acagcgcgcg gttggcaagc
     6181 gccgtcagcg cccggtagag gcgcggccgg cgggcgataa aactccacag cgccaaaccc
     6241 tggcgcgccg cccgcggcgt cagatggcgc tcgaactcgc gctcgcgcca gtggcgcatc
     6301 aggcggggca gcgggatg
//
LOCUS       DASWGA010000237         3065 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1925288, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000237 DASWGA010000000
VERSION     DASWGA010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3065
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1925288"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            438..>3065
                     /gene="secA"
                     /locus_tag="VF991_05760"
     CDS             438..>3065
                     /gene="secA"
                     /locus_tag="VF991_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEX9555980.1"
                     /translation="MLGALARGLFGTANDRVVKGFDKAVAKINALEPELAKLSDEQLR
                     ARTTEFRERLAKGETLDSLLVEAFATVREAAKRTLGQRHFDVQLKGGMVLHQGKIAEM
                     KTGEGKTLVATLPVYLNALEGKGVHVVTVNDYLAKRDSEWMGRVYSFLGLSVGVIVHE
                     LDDEQRKAAYACDVTYGTNNEIGFDYLRDNMKYRLDAMAQRPFNYAIVDEVDSILIDE
                     ARTPLIISGPAEDSSELYRRADTVIPRLQAEHFEKDEKNRTVVLTDAGVEAVEDILRG
                     DGLLPEGISLYAPNMVSVLHHVTQALRAHKLFARDTDYIVKDGQVVIIDEFTGRMMAG
                     RRYSEGLHQALEAKEKVEIQRENQTLASITFQNLFRMYPKLAGMTGTALTEAAEFAEI
                     YRLEVVEIPTNVAVARQDADDEIYRTIADKTRAIVKLVEECRARQQPMLVGTVSIEKS
                     EALSDELKKSKIPHNVLNARYHEQEAQIIAQAGRPGAITIATNMAGRGTDIQLGGNAD
                     MLLRQAEAEITPKLPDEVARKAELARVAAEIKTEVERNREIVLKAGGLYVVGTERHES
                     RRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRIFGNNKVLDWVQKKGMADDEALTHRW
                     LNKALETAQGKVEARNFEIRKNLLRFDDVMNSQRKEIYKERVELMATEDVSDTVAGMR
                     SDVVDVLVTRTIPQDVYAEQWKTAELKDEVQRLFGLDLPVADWAKEEGIADEEIKSRL
                     NDAVERLFAQRAAQHGTDVWRQVEKSVLMQLFDQSWKDHLLHLDHLRQGIGLRAYGQK
                     DPLNEYKREAFNLFNDLLSGLREQVVSLLATLQLRMEPAPMPEMPAQMQEVHEDPALA
                     TTLSDDPAFDPADPDGGGVA"
BASE COUNT          578 a         1006 c         1046 g          435 t
ORIGIN      
        1 caccgtcgcc ggcggcttgg ccgggggctt ctgccccggc gcctgggcgc cttgcggcgc
       61 gggcggctga gcggccggcg gtgtggcggg ctgctgggcg gcgagcggac cagccatcgc
      121 ggcggctgcg caggacagga cgatcaggcg cagggggcgc aagcgatggc tcatgacagg
      181 ctccggaaac ttttctgggg gacgaaaatg caactcgatc cgtttacaca ggcccgcttg
      241 ggccaagcaa gcattgcctc cccggcggcc ggggtgatga cggccaattg cggcactttt
      301 tcgtgagcac cgtgtcggcg gtgcggctcg cggcggttgg acggccggcg cgttgacact
      361 ggccggcacg ctctctatct ctgacaggga cggcgggccg cagtgcccgc ctaagtcttt
      421 acaatatcga ggatttcatg ctgggggcgc ttgcccgggg cctgttcggc acagccaatg
      481 accgcgtcgt caagggcttc gacaaggcgg tggcgaagat caacgcactc gagccggagc
      541 tggccaagct ctccgacgag caactgcgcg ccaggaccac cgaattccgc gagcgcctgg
      601 cgaagggcga aaccctggac agccttttgg tcgaggcctt cgccacggtg cgcgaggcgg
      661 ccaagcggac cctcggccag cgccatttcg acgtccagct caagggcggc atggtgctgc
      721 accagggcaa gatcgccgag atgaagaccg gcgagggcaa gacgctggtc gccacgctgc
      781 cggtctatct caacgccctc gaaggcaagg gcgtgcatgt cgtgacggtg aacgactatc
      841 tcgccaagcg cgactccgag tggatgggcc gggtctacag tttcctcggc ctcagcgtcg
      901 gcgtgatcgt gcacgagctc gacgacgagc agcgcaaggc ggcctatgcc tgcgacgtca
      961 cctacggcac caacaacgag atcggcttcg actacctgcg cgacaacatg aagtaccgcc
     1021 tggatgcgat ggcccagcgg cccttcaact acgcgatcgt cgacgaggtc gattcgatcc
     1081 tgatcgacga ggcgcgcacg ccgctcatca tctccggccc ggccgaggat tcctccgagc
     1141 tctaccgccg cgccgacacc gtcattcccc gcctgcaggc cgagcatttc gaaaaggacg
     1201 agaagaaccg caccgtcgtg ctgaccgacg ccggcgtcga ggcggtcgag gacatcctgc
     1261 ggggcgacgg actgctgccc gagggcatca gcctctatgc gccgaacatg gtctcggtgc
     1321 tgcatcacgt gacgcaggcg ttgcgcgccc acaagctgtt cgcgcgcgac accgactaca
     1381 tcgtcaagga cggccaggtc gtcatcatcg acgagttcac cggccgcatg atggccggcc
     1441 ggcgctactc cgagggcctg caccaggcgc tcgaggccaa ggagaaggtc gagatccagc
     1501 gtgagaacca gacgctggcc tcgatcacct tccagaacct gttccgcatg tatcccaagc
     1561 tggccggcat gaccggcacg gcgctgaccg aagccgccga gttcgccgag atctatcggc
     1621 tcgaggtggt cgagatcccg accaacgtgg cggtcgcgcg ccaggatgcc gacgacgaga
     1681 tctaccggac gattgccgac aagacgcgcg ccatcgtcaa gctggtcgag gagtgccgcg
     1741 cgcgccagca gccgatgttg gtcggcacgg tgtcgatcga gaagtcggag gcgctgtcgg
     1801 acgagctgaa gaagagcaag atcccgcaca acgtcctgaa cgcgcgctac cacgagcagg
     1861 aggcgcagat catcgcccag gccggccggc cgggcgccat caccatcgcc accaacatgg
     1921 ccggccgcgg caccgacatc cagctcggcg gcaacgccga catgctgctg cgccaggccg
     1981 aggccgagat cacgcccaag ctccctgacg aggtggcgcg caaggccgag ctcgcgcgcg
     2041 tggcggcgga aatcaagacc gaggtcgagc gcaatcgcga gatcgtgctc aaggcgggcg
     2101 gcctctacgt ggtcggcacc gagcgccacg agagccggcg catcgacaac cagctgcgcg
     2161 gccgctcggg ccgccagggt gatccgggcg cgtcgaagtt cttcctgtcg ctggaagacg
     2221 acctgatgcg catcttcggc aacaacaagg tgctcgactg ggtccagaag aagggcatgg
     2281 ccgacgacga ggcgctgacc caccgctggc tcaacaaggc gctggagacg gcgcagggca
     2341 aggtcgaggc gcgcaacttc gagatccgca agaacctgct gcgcttcgac gacgtcatga
     2401 acagccagcg caaggagatc tacaaggagc gcgtcgagct gatggcgacc gaggacgtct
     2461 cggacaccgt ggccggcatg cgcagcgacg tcgtcgatgt cctggtgacg cggacgatcc
     2521 cccaggatgt ctacgccgag caatggaaga cggccgagct caaggacgag gtgcagcgcc
     2581 tgttcgggct cgacctgccg gtcgccgact gggccaagga agagggcatc gccgacgagg
     2641 agatcaagtc gcggctgaac gatgccgtcg agcggctgtt cgcccaacgg gcggcgcagc
     2701 acggcacgga cgtctggcgt caggtcgaga agagcgtgct gatgcagctc ttcgaccaga
     2761 gctggaagga tcacctgctc catctcgacc atctgcgcca gggcatcggg ctcagggcct
     2821 acggccagaa ggatccgctg aacgagtaca agcgcgaggc gttcaatctc ttcaacgacc
     2881 tgctgagcgg cctgcgcgag caggtcgtca gcctgctggc cacgctgcag ttgcgcatgg
     2941 agccggcgcc gatgcccgaa atgccggcgc agatgcagga ggtccacgag gatccggcgc
     3001 tcgccaccac gctcagcgac gatcccgcct tcgacccggc cgatccggac ggcggcggcg
     3061 tcgcc
//
LOCUS       DASWGA010000238         5933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2057079, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000238 DASWGA010000000
VERSION     DASWGA010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5933
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2057079"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1230
                     /locus_tag="VF991_05765"
     CDS             <1..1230
                     /locus_tag="VF991_05765"
                     /inference="COORDINATES: protein motif:HMM:NF005760.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HEX9555981.1"
                     /translation="YDTPLTADIEGIARPFSHWVKTSPTAKTVARDGAAAIQAARVAP
                     GQIATLILPADTAWTEAEGAAETPETPQPQKPANEAVVAAAKALKSGQSAMLFIGGRA
                     LRARGLELAGKIAAKTGCKVQGAGGTARIERGAGRVPVLRLHFVIENAQAQLKGTKQM
                     VLCGAKAPYAFFAYPGKPSVLSPEDCEITTLCPVDGDPLGSLEALAAELGALNEKPAG
                     VAQPSRPDRPTGKFTLEGLGQALGATMPEGAIVVDESVTTGRGFFPFSAGAPPHDWLN
                     NMGGSIGFGGPVAVGAAIACPDRKVIAMIGDGSAMYTIQSLWTMARENLDVCVMIFSN
                     RSYNILYSQLADVGAANPGPRAIDMLTLDRPTLDFALMSKSMGVPGGKANNLEELTKQ
                     LTYAMSQKGPYLIDVVM"
     gene            1238..1927
                     /gene="trmB"
                     /locus_tag="VF991_05770"
     CDS             1238..1927
                     /gene="trmB"
                     /locus_tag="VF991_05770"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEX9555982.1"
                     /translation="MVEARRRTLHGRRRGKKLRAGQQSLLETLLPRLALALPVEPAKI
                     DLAQAFGGSLPPDGVWLEVGFGAGEHLVWQAEQNPGVGLIGCEPYLNGVAKCLAHIER
                     AGVGNVRLFTDDARLLMAALPARSLSRAFVLFPDPWPKTRHHKRRFVRRENLDRLAEL
                     MLPGAELRLATDDPSYLPWMVEHAGTHPAFEWLAEGPADWRGRPADWPATRYEQKMLA
                     GKPVFLRLRRR"
     gene            2181..2684
                     /gene="rimP"
                     /locus_tag="VF991_05775"
     CDS             2181..2684
                     /gene="rimP"
                     /locus_tag="VF991_05775"
                     /inference="COORDINATES: protein motif:HMM:NF000932.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEX9555983.1"
                     /translation="MTELLRRIEDIVAPTIVGMGYELVRVAMSKGGTLQIMIEPADGR
                     AMDIEACAVLSRALSAVLDVEDPMPGSYTLEVSSPGIDRPLTRPKDFARWAGHIARLE
                     TAEPVEGRRRFKGTLLGLEGDLVKLRLEDGKEAEVPLSVVSRAKLEMTDALIEEHRLA
                     QQGSQAH"
     gene            2710..4248
                     /gene="nusA"
                     /locus_tag="VF991_05780"
     CDS             2710..4248
                     /gene="nusA"
                     /locus_tag="VF991_05780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEX9555984.1"
                     /translation="MATTADIPRLEMLQVADMVAREKGIEREEVLEAMEQAIQKAGRA
                     KYGLEHDIRAEIDRKTGEIKLLRYMQVADPVENENTQVPLAEAQRRNPEAQVGDFLTD
                     ELPPIDFGRVAAQTAKQVITQRMRESERKRQYEEFKDRIGEIVSGVVKRVDYGNITVD
                     LQRAEGVIRRDETIPRESLRVNDRVRAYIFDVREEPRGPQIFLSRSHPQFMAKLFTQE
                     VPEIYDNIIEIKAVARDPGSRAKIAVLSHDSSIDPIGACVGMRGSRVQAVVQELQGEK
                     VDIIPWSNDTANFIVNALAPAEVSKVLMDEEKHKTEVVVPDDQLSLAIGRRGQNVKLA
                     SQLTGWEIDIMTEAEESERRQKETRERTELFKASLDVDDVIAHLLVAEGYAAVEDIAD
                     AAVEDLGGVEGFDEEIATELQRRAREYIEKRDSELAARLEELGMDEEVRSTEGLSLPM
                     LVALGEKGVKTRDDLADLASDELREIVGEAAMDNETANAIIMKAREHWFAAENAETAE
                     AAKA"
     gene            4283..4915
                     /locus_tag="VF991_05785"
     CDS             4283..4915
                     /locus_tag="VF991_05785"
                     /inference="COORDINATES: protein motif:HMM:NF006622.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEX9555985.1"
                     /translation="MTEPHVTVPPSASSAGPQRTCIATGEQAAPERMIRFVVAPGGEV
                     VPDLARCLPGRGMWVRAERAAVERAMTKNLFARAARGAAGAAVKPPADLAERVERLLL
                     ERALADLGRARRAGRAVAGFVKVEQMIGRQRAGLLVIAAEADGDGLAKLRASALPIAR
                     LGDAAALGGIFGREQTVYAAVARDDAGGEFIQRIEVGAARWCGYRLNSTG"
     gene            4948..>5933
                     /locus_tag="VF991_05790"
     CDS             4948..>5933
                     /locus_tag="VF991_05790"
                     /inference="COORDINATES: protein motif:HMM:NF019963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 associated
                     domain-containing protein"
                     /protein_id="HEX9555986.1"
                     /translation="MTEQKETTKPSKPLTLSSTARAGAGSAKSSDATQVRQKFSHGRT
                     RAVTVEVKKPVKRTAGPAAPASSPAPKSEAPAAAATARTLKLGGGAAATTARAPAAAR
                     PAAGETAGPGARGIVLRTLTEEEKEARTRALVGANRDAEAARLRASQDAQRRAIEDEV
                     RKKADDEHKKRLAEEEARKKAEEEVKRKADALVQKRLDQAATAAPTTTTARQAQEIGT
                     GAATTDSAPAPIRRPPIAPGVAQTANAALRRPPMRPAINKRLPQPPGARREVPKRRSD
                     KVDVGRAVEGENDFRSRSAAQMRRRLERDRRREHDDEPQQKVYREVTIPETIT"
BASE COUNT         1074 a         2003 c         2061 g          795 t
ORIGIN      
        1 tacgacacgc cgctcaccgc cgacatcgaa ggcatcgcgc ggccgttctc gcactgggtc
       61 aagacctcgc caactgccaa gaccgtggcc agggatggcg ccgcggcgat tcaagccgcg
      121 cgcgtggcgc cgggccagat cgccaccttg atcctgccag ccgacacggc gtggaccgag
      181 gccgagggcg cggccgagac gccggagacg ccgcaaccgc agaagcccgc caacgaggcc
      241 gtcgtcgccg ccgccaaggc gctgaaaagc ggccagtcgg cgatgctgtt catcggcggc
      301 cgggcgttgc gcgccagggg cctcgagctt gccggcaaga tcgccgccaa gaccggttgt
      361 aaggtgcaag gcgcaggcgg cacggcgcgc atcgagcgcg gtgccggccg cgtgccggtg
      421 ctgcgcctgc acttcgtgat cgagaacgcc caggcgcagc tcaagggcac caagcagatg
      481 gtgctgtgcg gggccaaggc gccctatgcc ttcttcgcct atcccggcaa gccgagcgtg
      541 ctgtcgccgg aggattgcga gatcaccacg ctctgcccgg tcgacggcga tccgctgggc
      601 tcgctcgagg cgctcgccgc cgagctcggc gccttgaacg aaaagccggc aggcgtcgcc
      661 cagcccagcc ggcccgatcg cccgaccggc aagttcacgc tcgagggcct gggccaggcg
      721 ctcggcgcca ccatgcccga gggcgcgatc gtggtcgacg aatcggtcac gacgggccgc
      781 ggcttcttcc cgttcagcgc cggcgccccg ccgcacgact ggctgaacaa catgggcggc
      841 tcgatcggct tcggcgggcc ggtcgcggtc ggcgccgcaa tcgcctgtcc cgaccgcaag
      901 gtgatcgcca tgatcggcga cggcagcgcg atgtacacca tccagtcgct gtggacgatg
      961 gcgcgcgaga acctcgacgt ctgcgtcatg atcttctcga accgttccta caacatcctc
     1021 tacagccagc tcgcggacgt cggcgcggcc aaccccggcc cgcgcgccat cgacatgctg
     1081 accctcgatc gtccgacgct cgacttcgcg ctgatgtcca agagcatggg cgtgcccggc
     1141 ggcaaggcga acaatctcga agagctcacc aagcagctga cctacgccat gtcgcaaaag
     1201 ggcccgtatc tgatcgacgt ggtgatgtaa gacggcaatg gtcgaagctc gtcggcggac
     1261 gctgcatggc cgtcggcggg gcaagaaatt gcgggccggg caacagtcgc tgctcgagac
     1321 gctgctgccc cgcctcgcgc tcgcgctgcc tgtcgagccc gccaagatcg atctcgccca
     1381 ggcgttcggc ggcagcctgc cgcccgatgg cgtgtggctc gaagtcggct tcggcgcggg
     1441 cgagcacttg gtctggcaag ccgagcagaa tcctggcgtc ggcctgatcg gctgcgagcc
     1501 ctatctcaac ggcgtcgcca agtgtttggc gcatatcgag cgcgcgggcg tcggcaacgt
     1561 ccggctgttc accgacgatg cgcgtcttct catggcggcc ctgccggccc gatcgctgtc
     1621 gcgggccttc gtgctgtttc ccgatccctg gcccaagacc cgccatcaca agcgccgctt
     1681 cgtgcggcgc gaaaacctcg acaggctggc cgagttgatg cttcccggtg ccgaactacg
     1741 actggcgacc gacgatccga gctacttgcc gtggatggtc gagcatgccg gtacccaccc
     1801 ggccttcgaa tggctggccg aaggaccggc ggactggcgc ggccggccgg ccgactggcc
     1861 ggcgacgcgc tatgagcaga aaatgttggc cggcaagccg gtctttctgc ggctgcggcg
     1921 ccgttaggca agatttcaca cctatttcga ggcttatcta aataacaaaa accccctcaa
     1981 tggtgcgcac ttaattcccg gatcgccaga tcgatcgccc caaagcgccg gattctcttg
     2041 ccagttggcg gccggacgcc tatatccccg ccatcctcat cgggttcgcg ggacgaacca
     2101 aataaaaaga gtgggccaaa aacccgctct tttcatttgt ggcaggcccg ccggcccaaa
     2161 acgtcgagaa acaggcccgc gtgaccgaat tgctgcgtcg catagaagac atcgtcgccc
     2221 cgaccatcgt cggcatgggc tacgagcttg tgcgcgtcgc catgagcaaa ggcggcacgt
     2281 tgcagatcat gatcgaaccg gccgatggcc gggcgatgga tatcgaggcc tgcgcggtgc
     2341 tgtcgcgcgc gctgtcggcg gtgctcgacg tcgaggatcc gatgccgggt tcctacactt
     2401 tggaagtgag ctcgcccggc atcgaccggc cgctgaccag gcccaaggat ttcgcccgct
     2461 gggcaggtca catcgcccgg ctggagaccg ccgagccggt cgagggacgc cgccgcttca
     2521 agggcacgct gctggggctc gaaggcgacc tcgtgaagct gcgcctcgag gacggcaagg
     2581 aggccgaggt gccgctgtcg gtcgtctcca gggccaagct cgagatgacg gatgcattga
     2641 tcgaagaaca ccggctcgcc cagcagggca gccaggccca ttagacgaat cgaagagagg
     2701 aacagaaaca tggcaacgac tgccgatatc ccgcgtctgg aaatgctgca ggtggccgac
     2761 atggtcgccc gtgagaaggg catcgagcgc gaggaagtgc tcgaggcgat ggagcaggcc
     2821 atccagaagg ccggccgcgc caagtacggc ctggagcacg acattcgcgc cgagatcgac
     2881 cgcaagacgg gcgagatcaa gctcttgcgc tacatgcagg tcgccgaccc ggtcgagaac
     2941 gagaacaccc aggtgccgct cgccgaggcg cagcgccgca atcccgaggc ccaggtcggt
     3001 gacttcctga ccgacgagct gccgccgatc gatttcggcc gcgtcgccgc ccagaccgcc
     3061 aagcaggtca tcacccagcg catgcgcgag agcgagcgca agcggcagta cgaggagttc
     3121 aaggaccgca tcggcgagat cgtgtcgggc gtggtcaaga gggtcgacta cggcaacatc
     3181 accgtcgacc tgcagcgcgc cgaaggcgtg atccgccgcg acgagacgat cccgcgcgaa
     3241 tcgctgcgcg tgaacgaccg ggtgcgcgcc tacattttcg acgtgcgcga agagccgcgc
     3301 ggcccacaga tcttcctgtc gcgcagccat ccgcagttca tggccaagct gttcacccag
     3361 gaagtgccgg agatctacga caacatcatc gagatcaagg cggtcgcgcg cgacccgggc
     3421 agccgtgcca agatcgcggt gctgagccac gacagctcga tcgacccgat cggcgcctgc
     3481 gtcggcatgc gcggcagccg cgtgcaggcc gtggtgcagg agctgcaggg cgagaaggtc
     3541 gacatcatcc cgtggtcgaa cgacaccgcg aacttcatcg tcaatgcgct ggcgcccgcc
     3601 gaggtcagca aggtgctgat ggacgaggag aagcacaaga ccgaggtcgt cgttcccgac
     3661 gatcagctca gcctcgccat cggccggcgc ggccagaacg tgaagctcgc ctcccagctc
     3721 accggctggg agatcgacat catgaccgag gccgaggaga gcgagcgccg ccagaaggaa
     3781 acgcgcgagc gcaccgagct cttcaaggcg tcgctcgacg tcgacgacgt gatcgcccac
     3841 ttgctggtgg ccgagggtta tgccgcggtc gaggatatcg ccgacgccgc ggtcgaggat
     3901 ctgggcggcg tcgagggctt cgacgaggag atcgccaccg agctgcagcg ccgcgcccgt
     3961 gaatacatcg aaaagcgcga ttccgagctc gccgcgcggc tggaagagct gggcatggac
     4021 gaggaggtgc gttcgaccga gggcctcagc ctgccgatgc tggtggcgct cggcgaaaag
     4081 ggcgtgaaga cccgcgacga tctcgccgac ctcgcgtccg acgaactgcg cgagatcgtc
     4141 ggcgaggcgg cgatggacaa cgaaaccgcc aacgccatca tcatgaaggc gcgcgagcat
     4201 tggttcgcgg cggaaaacgc cgaaacggcc gaagcggcca aggcctgatc ggaggtttgc
     4261 gcccttggcc cttgctagcg ccatgactga accccatgtc acggttccgc cctcggcttc
     4321 gtcggccggt ccgcagcgca cctgcattgc gaccggcgag caggcagcgc cggagcggat
     4381 gatccgcttc gtcgtcgcgc ccggtggaga ggtcgtgccg gacttggcgc ggtgcctgcc
     4441 cggacgcggc atgtgggtgc gggccgagcg cgcggcggtc gagcgggcca tgacgaagaa
     4501 cctgttcgcc agggccgcca gaggagcggc aggggctgcg gtcaagccgc cggcggatct
     4561 agccgagcga gtcgaacggc ttctgctgga gcgggcgttg gccgatctcg gccgggcgcg
     4621 gcgggcgggc cgggcggtgg cgggctttgt caaggtcgag cagatgatcg gccgtcaacg
     4681 ggccggcctg ctggtgatcg ccgcggaggc ggatggcgac ggattggcga agctccgtgc
     4741 cagcgccctg ccgatcgcgc gactaggcga tgcggcggcg ctgggcggca tcttcggtcg
     4801 ggaacaaacg gtttatgcgg cggtcgcccg cgacgatgcg ggcggtgagt tcattcagcg
     4861 aattgaggtc ggggcggcac ggtggtgcgg ctatcgactg aacagcaccg gttgacgcgc
     4921 cggagcggac caaggacaac acgcgatatg acggaacaga aagaaacgac caagccctcc
     4981 aagccgctca cgctgtcgag cacggcccgc gccggcgcgg gctcggccaa gagcagtgac
     5041 gcgacgcagg tgcgccagaa attctcgcat gggcgcacgc gagcggtgac ggtcgaggtc
     5101 aagaagccgg tcaagcgcac cgccggcccg gccgcgccgg catcgtcgcc ggcgccaaaa
     5161 tccgaagcgc cggcagcggc cgcgaccgct cgcaccctga agctgggcgg cggcgcagcg
     5221 gccaccacgg cgcgggcgcc cgcggccgca cgtccggccg ccggcgagac cgccggaccc
     5281 ggcgcccgcg gcatcgtgct gcgcaccctg accgaggaag agaaggaagc ccgcacccgc
     5341 gccctggtcg gcgccaaccg cgacgccgaa gcggcgcgac tgcgcgcctc ccaggacgcc
     5401 cagcggcgcg ccatcgagga cgaagtccgc aagaaggccg acgacgagca caagaagcgc
     5461 ctggccgagg aagaagcgcg caagaaggcc gaggaagagg tcaagcgcaa ggccgacgcg
     5521 ctggtccaga agcgtctcga ccaggccgct acggcggcgc ccacgacgac gacggcgcgt
     5581 caggcccagg agatcggcac cggcgcggca acgaccgata gcgcacccgc gccgattcgg
     5641 cgcccgccga tcgcgcccgg tgtcgcgcag accgccaatg cagcgctgcg ccggccgccg
     5701 atgcggcccg ccatcaacaa gcgcctgccg cagccgccgg gcgcgcgccg cgaggtgccc
     5761 aagcgccgct ccgacaaggt cgacgtcggt cgcgcggtcg agggcgagaa cgatttccgc
     5821 agccggtcgg cggcgcagat gcgccgccgc ctggagcgcg atcgccgtcg cgagcatgac
     5881 gacgagccgc agcagaaggt ctatcgcgag gtcacgatcc ccgagaccat cac
//
LOCUS       DASWGA010000239         1525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1547599, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000239 DASWGA010000000
VERSION     DASWGA010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1547599"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..130)
                     /locus_tag="VF991_05795"
     CDS             complement(<1..130)
                     /locus_tag="VF991_05795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007877700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9555987.1"
                     /translation="MQIRFDGKTVVVAGAARGIGRAIVRAFANDGASVVACDRLVAE"
     gene            complement(151..597)
                     /locus_tag="VF991_05800"
     CDS             complement(151..597)
                     /locus_tag="VF991_05800"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9555988.1"
                     /translation="MNAPTSAQSRRAVTAAVDRHGRKPLLIACCIAFILVPYPLFTYL
                     ASGNATFGMLIAIQILFALLISMFSGAGPAAIAEIFPTRSRSTWMTSGYALAVAIFGG
                     FAPYISVWLIDRFGSPTVHSFYLIAAAVVSTAVIWTLKETAFDELA"
     gene            complement(758..>1525)
                     /locus_tag="VF991_05805"
     CDS             complement(758..>1525)
                     /locus_tag="VF991_05805"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9555989.1"
                     /translation="TSWIAVPSPEAAVALLSGAHAASEDNVTSCELMSRQGIDFVLKH
                     IPGAADPLAERHDWYVLLEWSSSRPRRDGENQSGLREKMEAFLGEEMESGQVLDATIA
                     QNESQARALWALRENHSEAQKREGPSIKHDISVSVSKIPAFMKEGLAAMKKVLPECRP
                     LPFGHVGDGNLHFNCQAPPGWDKARFMAHAEAISGAVYDLVVGYGGSISAEHGIGQLK
                     VDELAHYRSRIELDTMRAIKRALDPQNLMNPGKVVRV"
BASE COUNT          261 a          489 c          518 g          257 t
ORIGIN      
        1 tctcggccac cagccgatcg caggccacga ccgaggcgcc gtcgttggcg aaggcgcgga
       61 cgatcgcccg gccgatgccg cgggcggcgc cggcgacgac gacggtcttg ccatcgaagc
      121 ggatctgcat cgccccctca cgtcaattcg tcacgccagc tcgtcgaagg cggtttcctt
      181 cagcgtccag atgacggccg tcgagaccac ggcggcggcg atcagataga aactgtgcac
      241 cgtcggcgag ccgaagcggt cgatcagcca caccgagata tagggcgcga agccgccgaa
      301 gatggcgacg gccagcgcat aacccgaggt catccaggtc gaccggctgc gggtcgggaa
      361 gatctcggcg atcgcggccg gtccggcgcc ggagaacatc gagatcagga gcgcgaacag
      421 gatctggatc gcgatcagca tgccgaacgt ggcattgccc gacgccagat aagtgaacag
      481 cggatagggc acgaggatga aagcgatgca gcaggcgatc agcaagggct tgcggccatg
      541 gcggtccacc gcggcggtga cggcccggcg gctctgggcc gaagttggtg cgttcatgtt
      601 tgtcccccgg tctctgtcat cgcgcgcggg gtaatccccg cgctgaagcg cagcgaagga
      661 tctcattgcc gccgatgccg agatctgcgt cgacggcgat gagatgcttc gcttcgctca
      721 gcatgacatg aaagcgtggc gcgctcccag caaagagcta gacccggacg actttccccg
      781 gattcatgag gttctgcgga tcgagcgcgc gcttgatggc gcgcatggtg tcgagctcga
      841 tccggctgcg gtagtgggcg agctcgtcga ccttgagctg gccgatgccg tgctcggccg
      901 agatcgagcc gccatagccg accacgaggt catagactgc gccgctgatc gcctcggcat
      961 gcgccatgaa gcgcgctttg tcccagcccg gcggcgcctg acagttgaag tgaagattgc
     1021 cgtcgccgac atggccgaac ggcaacggcc ggcattcggg cagcaccttc ttcatcgctg
     1081 ccagcccctc cttcatgaag gcggggatct tgctcaccga caccgagatg tcgtgcttga
     1141 tcgaggggcc ttcgcgcttc tgcgcctcgg agtggttttc gcgcagcgcc cacagtgcac
     1201 gtgcctggct ttcgttctgg gcgatggtgg cgtcgagtac ctggccgctt tccatctcct
     1261 cgccgagaaa ggcctccatc ttctcgcgca ggcccgactg gttctcgccg tcgcgccgcg
     1321 gccggctcga cgaccattcg agcagcacgt accagtcgtg gcgctcggcc aggggatcgg
     1381 cggcgccggg aatgtgtttt aggacaaagt cgatgccctg gcggctcatc agctcgcagg
     1441 aggtgacatt gtcctcgctt gcggcgtggg cgccgctcag caacgccacg gcggcctcgg
     1501 gcgagggcac ggcgatccac gaggt
//
LOCUS       DASWGA010000240         4208 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_409072, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000240 DASWGA010000000
VERSION     DASWGA010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4208
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409072"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VF991_05810"
     CDS             <1..262
                     /locus_tag="VF991_05810"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEX9555990.1"
                     /translation="AGDETTTRVRANLTTYFVFVDLLAIATFASRGLIDWSTGVLGLL
                     LAPVVMLGGVLGGRLFPLASERFYRRLALVLLVGVAIGALIL"
     gene            287..1000
                     /locus_tag="VF991_05815"
     CDS             287..1000
                     /locus_tag="VF991_05815"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HEX9555991.1"
                     /translation="MKIWDKIVEGATRLASGESIGALLGLSAPPTGDVAHPGLRQIGF
                     TIGVIALGAKMAGADGEVSDIEIEAFRNFFQVPPGEEKNVERFFNLAKRDVAGFESYA
                     RQLAALFRDAPEVLENVLEGLFDIARADGRIDAREADYLAQVARIFGLSSERFERAKA
                     AALGIIECEPCIILGIDPLATDEQVREAWLRQVRAHHPDRMIAQGLPEEAIAMANRKV
                     ALINDAYDRLRRERGLVPA"
     gene            1017..1703
                     /locus_tag="VF991_05820"
     CDS             1017..1703
                     /locus_tag="VF991_05820"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006935990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX9555992.1"
                     /translation="MTVVDLPSPNQAPRPAGTAVDLLVLHYTELPLKESLDILCDGAR
                     EHRVSAHYVLAEDGTPYRLVPEERVAWHAGRSHWRGREALNATSIGIEIVNLHGDRHD
                     YPAAQIAALIGLSRGILARHPAIVPRNVVGHSDIAPKRKIDPGRRFPWPALAAAGIGL
                     WPRPGTTPAAGDVQAALERFGYPPAVDLTTADIVAAFQRRFRPARVDGIADPETRALL
                     ADLLDQVGPN"
     gene            1833..2218
                     /gene="rnpB"
                     /locus_tag="VF991_05825"
     ncRNA           1833..2218
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VF991_05825"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            2431..2910
                     /locus_tag="VF991_05830"
     CDS             2431..2910
                     /locus_tag="VF991_05830"
                     /inference="COORDINATES: protein motif:HMM:NF014439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555993.1"
                     /translation="MAFRSEILIKLDKKGRVLLPAAFRDELPADDRGAFVLYHSPNLP
                     GVVNGNSRAGFDGMLERLRTEALGPKGALKVALDDEAFDPAGYLSAAARTIAMEPDGR
                     FSLPAEFASVLEVGDGVMLVGKGDKFQLWNPGRWQTRRDSDRDKMAAFVRGLGTGEA"
     gene            2907..3869
                     /gene="rsmH"
                     /locus_tag="VF991_05835"
     CDS             2907..3869
                     /gene="rsmH"
                     /locus_tag="VF991_05835"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEX9555994.1"
                     /translation="MSAARHVPVLAREVVDALRPRDGGRYVDGTFGAGGYSSAVLDRA
                     QCQVIALDRDPDAIAAGQVLAERYAPRLRLIEGRFGDMAELLSAEGVDEVDGVALDLG
                     VSSMQFDQADRGFSFRASGPLDMRMERSGPSAADLVNEADEAELADIIWRYGEERKSR
                     RVARAIVEARRQKPIETTGELAEIVRRAVGPQGRDESDPATRTFQALRIAVNDELGEL
                     ERGLAAAEQVLAPGGRLAVVSFHSLEDRAVKQFVRARAGRVPAPSRHAPPRAQNRAAT
                     LSDLTRKPVLPSADEIAKNPRARSARLRVAEKLGEKPAKKGGRA"
     gene            3866..>4208
                     /locus_tag="VF991_05840"
     CDS             3866..>4208
                     /locus_tag="VF991_05840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555995.1"
                     /translation="MIHRGLLFWSAAAVATAVGLFAVKYKVQDLEEKIDRTNQKIVES
                     QQATHILRIEWAHLNEAERIERLAVKYLQLEPASIKQVIRLDSLKSDSVPPRRDPPLP
                     SPPRTGNDVPSS"
BASE COUNT          650 a         1481 c         1427 g          650 t
ORIGIN      
        1 cgccggcgac gagacgacga cgcgcgtgcg agccaacctc acgacctact tcgtgttcgt
       61 cgatctgctg gcgatcgcca ccttcgcgtc gcgcgggctg atcgactgga gcaccggcgt
      121 gctgggcctg ctgctcgcgc cggtggtcat gctgggcggc gtgctgggcg ggcggctgtt
      181 tccgctggcc agcgagcgct tctaccgccg ccttgcactc gtgctgctgg tcggcgtggc
      241 gatcggcgcc ttgatcctgt gagccggaac gcgtagcggg gcagacatga agatctggga
      301 caaaatcgtc gagggggcga cgcgcctggc cagtggcgag tcgatcggcg cgctgctcgg
      361 gctgagcgcg ccgcccacgg gcgacgtcgc gcatcccgga ctgcgccaga tcggcttcac
      421 catcggcgtg atcgcgctcg gcgccaagat ggccggcgcc gacggcgagg tgtcggacat
      481 cgagatcgag gcgttccgca acttcttcca ggtgccgccg ggcgaagaaa agaacgtcga
      541 gcgcttcttc aacctggcca agcgcgacgt cgcgggcttc gagagctatg cgcgccagtt
      601 ggccgcgctg tttcgcgacg cgccggaggt cctggagaac gtgctcgagg gcctgttcga
      661 cattgcccgg gccgacggcc ggatcgacgc ccgggaggcc gactatctcg cccaggtcgc
      721 gcgcatcttc ggcctcagca gcgagcgctt cgagcgcgcc aaggcggcgg cgctgggcat
      781 catcgagtgc gagccgtgca tcatcctcgg catcgacccg ctggccaccg acgaacaggt
      841 gcgcgaggcc tggttgcgcc aggtgcgcgc ccatcatccc gaccgcatga tcgcccaggg
      901 cctgcccgag gaggcgatcg ccatggccaa ccgcaaggtc gctttgatca acgacgccta
      961 cgaccggctg cggcgcgaac gcgggctggt tcccgcctga tcgtgcccga ccggccatga
     1021 ccgtcgtcga tctgccgtcg cccaatcagg cgccgcggcc ggccgggacc gccgtcgatc
     1081 tgctggtgct gcactacacc gagctgccgc tgaaagagtc gctcgacatc ctgtgcgacg
     1141 gcgcgcgcga gcatcgcgtc agcgcccact acgtgcttgc cgaggacggc acgccgtacc
     1201 ggctggtgcc ggaagagcgc gtcgcctggc atgccggccg gtcgcattgg cgcggccggg
     1261 aggcgttgaa cgccacgtcg atcggtatcg agatcgtgaa cctgcacggc gatcgccacg
     1321 actatccggc ggcgcagatc gccgcgctga tcgggctcag ccgcggcatc ctcgcgcgcc
     1381 atcccgccat cgtgccgcgc aacgtcgtgg gacattccga catcgccccc aagcgcaaga
     1441 tcgatcccgg ccggcgcttt ccctggccgg ccctggccgc cgccggcatc ggcctgtggc
     1501 cgcgccccgg taccacgccg gcggcaggcg acgtgcaagc ggcgctcgag cgtttcggct
     1561 acccgcccgc tgtcgacctg accacggccg acatcgtggc cgccttccag cgccgttttc
     1621 ggccggcccg cgtcgacggc atcgccgatc ccgagacccg cgccctgctg gcggatctgc
     1681 tcgatcaggt cgggccgaac taggacgcgg cctttcccgg acaagcctta ggggcttttt
     1741 ttcaaagacc ccctcaatgg tgcctgctta ttcagtccgg cggctccgcc tgcttgacca
     1801 ggccggcgcc gaagcctagc tagtcgcgcg ggtcagacgg ctggatggct gcatcgcgcg
     1861 ggcgaccgtg cggtgaggaa agtccgggct ccacggagac acggtgccgg ataacgtccg
     1921 gcgggggtga ccccagggaa agtgccacag aaaacaaacc gcctgcccgg ttcgccggac
     1981 gggtaagggt gaaacggtgg ggtaagagcc caccgcgcga ccggcaacgg aagcggcacg
     2041 gcaaacccca ccgggagcaa gaccaaatag gggcggcacg ccgggcaacc ggcagcggtg
     2101 tttccgcgtc gccgcccggg tcggtcgcgc gaggcgctcg gcaacgggtg tcccagagga
     2161 atggccatcc atcgctttcg ggcgaggaca gaacccggct tacaggccgt ctgacccctc
     2221 tgtgacattt gccaggtcgt gcctaccagg tcttgcgttg gttgcagcga agcgcacaat
     2281 acatgttgtg cctaagatcc tgacattcct cagcgatttt tattattgat tattgcttcc
     2341 ctgggcatcc catgatatcc cattatatcc cgtatgacgg tttacgcagg agcgtggggc
     2401 acctgcggcg ggatgcaggg ggacagggcc gtggcatttc ggtccgaaat cctgatcaag
     2461 ctcgacaaaa aaggccgggt cctgctgccc gcggcttttc gtgacgagct gccggccgac
     2521 gaccgcggcg ccttcgtcct ctatcactcg cccaatctgc ctggtgtcgt gaacggcaat
     2581 tcgcgcgccg gcttcgatgg catgctcgag cggctgcgca ccgaagccct ggggcccaag
     2641 ggcgcgctca aggtggcgct cgacgatgag gcgttcgatc ccgccggcta cctgtcggcc
     2701 gccgctcgca ccatcgccat ggagccggac ggccgctttt cgctgccggc ggaattcgcc
     2761 tcggtgctcg aggtcggcga cggcgtcatg ctggtcggca agggcgacaa gttccagctg
     2821 tggaatcccg ggcgctggca gacccgccgc gattccgatc gcgacaagat ggcggccttc
     2881 gtgcgcggcc tcgggaccgg cgaggcatga gcgccgcccg ccacgtcccg gttctcgcgc
     2941 gcgaggtcgt cgatgcgctg cgtccgcgcg acggcggccg ctatgtcgac ggcacgttcg
     3001 gcgccggcgg ctattcgagc gcggtgctcg atcgcgccca atgccaggtg atcgcgctcg
     3061 accgcgatcc cgacgccatt gccgccggcc aggtgcttgc cgagcgctac gcgccgcggc
     3121 tgcgcctgat cgaaggccgc ttcggcgaca tggccgagct cttgtcggcc gaaggcgtcg
     3181 acgaggtgga cggcgtggcg ctcgatctcg gcgtctcgtc gatgcagttc gaccaggctg
     3241 accgcggctt ctccttccgc gcctccggcc cgctcgacat gcgcatggag cgaagcggcc
     3301 cctccgccgc cgacctcgtg aacgaagccg acgaagccga gctcgccgac atcatctggc
     3361 gctacggcga ggagcggaag agccgccgcg tggcgcgcgc catcgtcgag gcgcgccggc
     3421 aaaagcccat cgagaccacg ggcgagctgg ccgagatcgt gcgccgcgcg gtcgggccgc
     3481 agggcaggga cgagagcgat cccgccaccc gcaccttcca ggcgctgcgc atcgccgtga
     3541 acgacgagct gggcgagctc gagcgtgggt tggcggctgc cgagcaggtg ctggcgccgg
     3601 gcggccggct cgccgtcgtc tccttccatt cgttggagga ccgcgcggtc aagcagttcg
     3661 tgcgcgcccg cgccggccgc gtgccggccc cgtcgcgcca tgcgccgccg cgcgcccaga
     3721 atcgcgccgc gaccctgagc gatctcacgc gcaagccggt gctgccgtcg gccgacgaga
     3781 tcgctaaaaa tccgcgcgcc cgctcggcac gcctgcgcgt cgccgagaag ctcggcgaga
     3841 agcctgccaa gaagggaggc cgcgcatgat ccatcgcgga ctcctgttct ggtcggccgc
     3901 cgccgtcgcc accgcggtcg gcctgttcgc cgtcaaatac aaggtgcaag acctcgagga
     3961 gaagatcgac cgcaccaacc agaagatcgt cgagagccag caggccacgc acatcctgcg
     4021 catcgaatgg gcccacctca acgaggccga gcgcatcgag cggctcgccg taaaatatct
     4081 ccagctcgag ccggcctcga tcaagcaggt catccggctc gattcgctca agtcagattc
     4141 tgtccccccg cggcgcgatc caccactccc ttccccccca cgaacgggca acgacgtccc
     4201 ctcgtcga
//
LOCUS       DASWGA010000241         2356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1035712, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000241 DASWGA010000000
VERSION     DASWGA010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1035712"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VF991_05845"
     CDS             complement(<1..240)
                     /locus_tag="VF991_05845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555996.1"
                     /translation="MTPLMERLSSDFLPLFLRGMVVNFEIAVIALAVGLALGLLLAFA
                     RLGGGVPGGAAASVISVMRAAPTFVVMFFLLNAIPR"
     gene            complement(237..1883)
                     /locus_tag="VF991_05850"
     CDS             complement(237..1883)
                     /locus_tag="VF991_05850"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9555997.1"
                     /translation="MALTAAWPLSARPDKSPDAALARLLLEARATLPAACSQANADRL
                     IKILCAKRIRIGIRDYYPLFATRNGEAREGYEVDVALAIGQRLGVEVEFVRVNAATRI
                     PLLAEDRVDLVIATMGHNTQRDGQARFIRPHYYRSETAVIGPRALAVINMADLPGRTV
                     CVTIGNGSNAELVSQGARLMLFDEAGALPDRLRDETCTLAAQDDSFFANYFTDPDFAR
                     RYAQKFGFAQVPWGMAVARQGSEQLARALDLISQIFHRDGLFLDIARKHRIGTSFLEQ
                     QQAVWQREACNADTGAADSACVLPPLNAELKPTPFANSVSAFESWFESWSDIDLSLPM
                     LKTAPAWSMFKEGVLNSLILITGALAATLGFALLLGAALGARLALLRWPARLLTVTLQ
                     SSPIVLTLVIAAAIVHAFFAYSDAVALGASIAALGLANGSNAGQALSEAMWSLRAEGS
                     AGGGPLFGRALGRAATQIVAFLVNAAKGTPIASFIGAPELLSALTDITSFSSGRATTY
                     TLLLVFYIVVVMIVVWLCGKLRLYLEGRQAAGPGSHKVPA"
     gene            complement(2003..>2356)
                     /locus_tag="VF991_05855"
     CDS             complement(2003..>2356)
                     /locus_tag="VF991_05855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9555998.1"
                     /translation="DGAVPGRRPTWSAGGADGRSLLDSFLERLGEHLVPDGRAIITHN
                     AFVGVERSREIAARSGFDLRVVLTTLVNVPDPKLARMTQSVLRAEEGRSIHRYGPYAF
                     ADVHIVEIAAAGVMD"
BASE COUNT          412 a          781 c          849 g          314 t
ORIGIN      
        1 gcgcgggatg gcgttcagca ggaagaacat gacgacgaag gtcggcgccg cccgcatcac
       61 cgagatgacc gacgccgccg caccgcccgg cacgccgccg cccagccggg caaaggccag
      121 cagcaggccg agcgccagcc cgacggcgag cgcgatgacg gcgatctcga agttcaccac
      181 catgccgcgg agaaacagcg gcaggaagtc ggacgaaagc cgttccatca gcggcgtcat
      241 gccggcacct tgtgcgatcc cgggcccgcc gcttggcgtc cttcgaggta gagccggagc
      301 ttgccgcaca gccagacgac gatcatcacc acgacgatgt agaacaccag caggagcgtg
      361 taggtcgtcg cccgcccgct cgagaacgac gtgatgtcgg tgagcgcgct caaaagctcg
      421 ggcgcgccga tgaagctcgc gatcggcgtg cccttggcgg cattgaccag gaaagccacg
      481 atctgtgtcg ccgcgcggcc gagcgcgcga ccgaacagcg gaccgccgcc ggcggagcct
      541 tcggcgcgca ggctccacat cgcttccgac agcgcctgac cggcgttgct gccgttggcc
      601 agcccaaggg cggcgatcga ggcgccgagc gccacggcgt cggaataggc gaagaaggca
      661 tgcacgatcg ctgcggcgat caccagcgtg agcacgatcg gcgaggattg cagcgtgacg
      721 gtgagcagcc gtgccggcca acgcagcagg gccaggcgcg cgcccagggc ggcgcccaac
      781 agcagcgcaa agcccagggt cgcggcgagc gcgcccgtga tcaggatcag cgaattgagc
      841 acgccctcct tgaacatcga ccaggccggg gcggtcttca gcatcggcag cgacaaatcg
      901 atgtccgacc acgactcgaa ccacgactcg aaggccgaca cgctgttggc gaagggcgtc
      961 ggcttcagct cggcgttgag gggtggcagc acgcaggcgg agtcggcggc gcccgtgtcg
     1021 gcgttgcagg cctcccgctg ccacaccgcc tgctgctgct cgagaaagct cgtgccgatg
     1081 cggtgcttgc gcgcgatgtc gaggaagagg ccgtcgcgat ggaagatctg gctgatcagg
     1141 tcgagcgcgc gggcgagctg ctcgctgccc tggcgggcga ccgccatgcc ccacggcacc
     1201 tgggcgaagc cgaacttctg ggcatagcgc cgggcgaaat cgggatcggt gaaatagttg
     1261 gcgaagaagc tgtcgtcctg cgccgccagg gtgcaggtct cgtccctgag ccgatcgggc
     1321 agcgcgcccg cctcgtcgaa cagcatgagg cgcgcgccct gcgacaccag ctcggcgttg
     1381 gagccgttgc cgatggtcac gcacacggtg cggcccggca ggtcggccat gttgatcacc
     1441 gcgagcgcgc gcggtccgat caccgccgtc tccgagcggt agtagtgcgg gcggatgaag
     1501 cgcgcctggc cgtcgcgctg cgtgttgtgg cccatggtgg cgatgacgag gtcgacgcga
     1561 tcctcggcca gcagcgggat gcgggtcgcc gcgttgacgc gcacgaactc gacctcgacg
     1621 ccgagccttt ggccgatcgc cagcgccaca tcgacctcgt agccctcgcg cgcctcgccg
     1681 ttgcgcgtgg cgaacagcgg atagtagtcg cggatgccga tgcggatacg cttggcacac
     1741 aggatcttga tcagccggtc ggcattggct tgcgagcagg ctgccggcag cgtggcgcgc
     1801 gcctccagca gcaggcgcgc cagcgcggcg tcaggcgact tgtccggccg ggcgctgagc
     1861 ggccaagcgg cggtaagcgc caagacaatc aaagctgtca cgctgagcga agcgaaggcc
     1921 tgccctgagc ggagccgaag ggatctcatg gaagcggcaa tgaggtcctt cgctgcgctc
     1981 agtacgacgg gagtcgaccc catcagtcca tcaccccagc cgcggcgatc tcgacgatgt
     2041 gcacatcggc gaaagcgtag gggccgtagc gatggatcga gcggccctct tcggcgcgga
     2101 gcacgctctg cgtcatgcgc gcgagcttgg ggtcggggac attgaccagg gtggtgagca
     2161 cgacgcggag gtcaaacccc gagcgcgcgg cgatctcgcg cgagcgctcg acgccgacga
     2221 aggcgttgtg ggtgatgatg gcgcggccgt ccggcacgag atgctcgccc agtctttcga
     2281 gaaaggaatc gagcaggctg cgcccatcgg ctccgccggc gctccaggtc ggccggcggc
     2341 cgggcacggc gccgtc
//
LOCUS       DASWGA010000242         4086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_156307, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000242 DASWGA010000000
VERSION     DASWGA010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4086
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156307"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VF991_05860"
     CDS             complement(<1..322)
                     /locus_tag="VF991_05860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9555999.1"
                     /translation="MTIDAVYLVQLTLNGITLGLIYALIAVGLSLIFGVMEIINFAHG
                     ELLMLGAFAMTFALPVVGLLYWPALAAAILATMVIGLVIYELLLAKLRPDEFERSILI
                     TLGLS"
     gene            427..1581
                     /locus_tag="VF991_05865"
     CDS             427..1581
                     /locus_tag="VF991_05865"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556000.1"
                     /translation="MEGNKMKAKFWMAAAAACVLGAGPLAAQQPIVIGVSTPQTGVAA
                     VASEWEMWGVNLAVEEINQAGGLLGGRKIELMVLDNKCNPSEAVNVANKLVEAKVVAI
                     EGAHCSSAHLASMKIVADAKIPMITGIASNPQITELAGPGRNEYSFRISPSDSAMMNA
                     LGLYLGDKKLFKTVAIVGEDTDFGRGGADAFKAVAEKAGVTVVSTDFHPQNAPDFTSI
                     LTRLQQRRPDAIATFQVGGDSINFLRQAMQLGVRIPYTGRIELGGRNQPIIEAGGMEK
                     SISAWTYNATIDAPQNKAFVDKIKAKYNSEPYLQTWGGYDAIRIVAQAIKDANSTEGP
                     KIKDAIKAMKFTNVMGKTVTFDDHNSAGRFVVLQTVVNKKVGVADIVEVK"
     gene            1680..1823
                     /locus_tag="VF991_05870"
     CDS             1680..1823
                     /locus_tag="VF991_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556001.1"
                     /translation="MKTLSIFAIAAIIAGLASACSIRHETIEQPSTAAVVTTVPSSTV
                     VYY"
     gene            complement(1866..2840)
                     /locus_tag="VF991_05875"
     CDS             complement(1866..2840)
                     /locus_tag="VF991_05875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014440107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9556002.1"
                     /translation="MPQLRRRLLMALALLAVGVGTALAQAYPSRQIRIVVPFAAGAGV
                     LDIMARLVGQHLGASLGQQVVIDNRPGAGGIVGAEVVAKAEPDGYTLLMGNTALVVSP
                     YLYAKLPFEPLADFVPVTLVNSAPLLLVVHPSVPVQSVKELIAYAKARPGQLNYGSGG
                     VGSTPYLATELLKAMAGIDVVHVPYKGGAPALADLVAGQLTFMIENVPGTMPLVKSGK
                     LRALAITSAQRSPLAPDLPTMAEAGVPDYEMVGWNGVFVAKGTPAEIVARLNSDLAKV
                     LRLPDVKEQMATLGAEPGGDSTPAFGAFVKAESARWGRIIKERGIRPE"
     gene            complement(2853..3347)
                     /locus_tag="VF991_05880"
     CDS             complement(2853..3347)
                     /locus_tag="VF991_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556003.1"
                     /translation="MILGMSLETFTFVHVVISMVGIMTGFIVVALMLSSAPIAGWNGF
                     FLIATILTSVTGFFFPLKAFGPPHIVGVISLVVLAVALFAVYGRKLSGVWRSVYVGSA
                     ILALYLNVFVGVVQSFQKFAYLHNFAPNGSEPAFVVTQIVVLILFVLLGVVAVRRYHP
                     ALRA"
     gene            complement(3370..>4086)
                     /locus_tag="VF991_05885"
     CDS             complement(3370..>4086)
                     /locus_tag="VF991_05885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556004.1"
                     /translation="ERDDAGAIADVSYNLALAQMKAGDAKAALVTVREARSDLDRRRA
                     PVPAELFLVQAAAAYRSGDLLGASAAAQEALGRTAKDPDTVPRAWFIRGLVAAERGDG
                     GGLAQAIAALPPSKQADLLADRQELQGRAALLANQPVEALALFEQSAAGRQQALDYRG
                     MARALALAGDAALRSNHAAEAADLFLRAGRSALLQGDSATALPLLKRAEDLARQTAQP
                     GIVEEVARLRKVAAERATKA"
BASE COUNT          748 a         1340 c         1387 g          611 t
ORIGIN      
        1 tcgagagccc gagcgtgatc aggatgctgc gctcgaattc gtcgggccga agcttcgcca
       61 gcaagagctc gtagatcacc aggccgatca ccatggtggc gaggatcgcg gcggcgagcg
      121 ccggccagta gagcaggccg accaccggca gcgcgaacgt catggcgaag gcgcccagca
      181 tcaggagctc gccgtgggcg aaattgatga tctccatgac gccgaagatc agcgacagac
      241 cgacggcgat cagggcatag atcaggccca gcgtgatgcc gttcagcgtc agctgcacga
      301 gatagacggc gtcgatggtc attgtggctc ccagcatagc aaatcccgga ccatgccgag
      361 cgcaaacttg gcggcttggc atgcggccgg ctttgttatt gactacagtg ggtctgggga
      421 gccgtggtgg agggcaacaa gatgaaagcg aaattctgga tggcggctgc ggccgcctgt
      481 gtgctgggcg ctggtccgct tgcggcgcag caaccgatcg tgatcggcgt atcgacgccg
      541 caaaccggcg tcgccgccgt cgcctcggaa tgggagatgt ggggcgtcaa cctcgccgtc
      601 gaggagatca accaggcggg cggccttttg ggcgggcgca agatcgagct catggtgctc
      661 gacaacaagt gcaatccctc ggaggcggtg aacgtcgcca acaagctcgt cgaggccaag
      721 gtggtggcga tcgagggcgc ccattgcagc tcggcgcacc tcgccagcat gaagatcgtg
      781 gccgacgcca agatcccgat gatcaccggc atcgcgtcga acccgcagat caccgagctg
      841 gccggccccg gccgcaacga atactccttc cgcatcagcc cgtcggacag cgcgatgatg
      901 aatgcgctgg gcctctatct cggcgacaag aagctgttca agacggtggc gattgtcggc
      961 gaggacaccg acttcggccg cggcggcgcc gatgccttca aggcggtcgc cgagaaggcc
     1021 ggcgtcacgg tcgtgtcgac cgacttccat ccgcagaacg cgcccgattt caccagcatc
     1081 ctgacgcgcc tgcagcagcg ccggccggat gccatcgcca ccttccaggt gggcggcgat
     1141 tcgatcaact tcctgcgcca ggccatgcag cttggcgtgc gcatccccta caccggccgc
     1201 atcgagctgg gcggccgcaa tcagccgatc atcgaggcgg gcggcatgga gaagtcgatc
     1261 agcgcctgga cctacaatgc cacgatcgac gcgccgcaga acaaggcgtt cgtcgacaag
     1321 atcaaggcca agtacaactc cgagccctac ctgcagacct ggggcggcta cgacgccatc
     1381 cgcatcgtcg cccaggcgat caaggacgcc aacagcaccg agggtccgaa gatcaaggac
     1441 gccatcaagg cgatgaagtt caccaacgtc atgggcaaga ccgtcacttt cgacgaccac
     1501 aactcggccg gccgcttcgt cgtgctgcag accgtggtca acaagaaggt cggcgtggcc
     1561 gatatcgtcg aggtgaaata gcaactgtgg cagcggcggg gcggcaatag ggcagcggtg
     1621 ggcggcaacc gccgacggat gcgggtcgtt ttcttcctag gcagcacgag gaggttaaca
     1681 tgaagaccct ttccattttc gccattgccg cgatcattgc cggcttggcc agcgcatgtt
     1741 cgatcagaca cgaaaccatc gaacagccgt ctacggccgc cgtcgtcacg acggttccgt
     1801 cgtcgaccgt ggtttattac tgacgccgcg aggcgctagc gcgtatgagc tccgccccga
     1861 gtgcgctact cggggcggat gcctctttcc ttgatgatcc tgccccagcg cgcggattcg
     1921 gccttcacga aagcgccgaa cgctggggtc gaatcgccgc ccggctccgc accaagggtt
     1981 gccatttgct cctttacgtc cggcagacgc aggaccttgg cgaggtctga atttagtcgc
     2041 gcgacgatct cggccggcgt gcccttggcg acgaagaccc cgttccagcc caccatctcg
     2101 tagtccggca cgcccgcctc ggccatggtc ggcaggtcgg gcgcgagcgg cgagcgttgc
     2161 gcgctggtga tcgccagtgc ccggagcttg cccgacttca ccagcggcat cgtgcccggc
     2221 acgttttcga tcatgaaggt gagttgtccc gccacgagat cggccagcgc gggtgcgccg
     2281 cctttgtagg gcacgtgcac cacgtcgatg ccggccatcg ccttcaagag ttcggtggcg
     2341 aggtagggcg tgctgccgac gccgcccgaa ccgtagttga gctggccggg acgcgccttg
     2401 gcataggcga tcaactcttt gaccgactgc accggtaccg agggatggac gaccagcaag
     2461 agcggcgcgg aattgaccag cgtcaccggc acgaagtcgg cgagcggctc gaacggcagc
     2521 ttggcataga gataggggct taccaccagg gccgtgttgc ccatcaagag cgtgtagccg
     2581 tcgggctcgg ccttggccac gacctcggcg ccgacaatgc cgccggcgcc cggccggttg
     2641 tcgatcacca cctgctggcc caggctcgcg ccgagatgct ggccgaccag ccgcgccatg
     2701 atgtcgagta cgccggcgcc ggcggcgaac ggcaccacga tgcggatctg ccggctggga
     2761 taggcctgcg ccagcgccgt gccgacgccg acggcgagca gcgccagggc catcagcagg
     2821 cggcgccgga gctgaggcat cgttaggcgc cgctatgccc tgagcgcggg atgatagcgc
     2881 cgcaccgcga cgacgccgag caggacgaac aggatcagca ccacgatctg ggtgacgacg
     2941 aaggccggct ccgagccgtt gggcgcgaag ttgtgcaggt aggcgaactt ttggaacgac
     3001 tgcacgacgc cgacgaagac gttgaggtag agcgccagga tggcgctgcc gacatagacg
     3061 gagcgccaga cgccggaaag cttgcggccg tacaccgcga acagcgccac cgcgagcacg
     3121 accagcgaga tcacgcccac gatatgcggc gggccgaacg ccttcagcgg gaagaagaag
     3181 cccgtgacgc tggtcaggat ggtggcgatg agaaagaacc cgttccagcc ggcgatcggg
     3241 gcgctcgaca gcatcagcgc cacgacgatg aagccggtca tgatgccgac catgctgatg
     3301 acgacgtgca cgaaggtgaa cgtctcgagt gacattccca ggatcatgac tctctcctct
     3361 ttaagcaaat cacgctttcg tcgcgcgctc ggccgcgact ttgcgcagcc gcgcgacctc
     3421 ctcgacgatg ccgggctgcg cggtctggcg cgccagatcc tcggcccgct tcaacagcgg
     3481 cagggctgtc gcgctgtcgc cctgcagcaa ggcgctgcgg ccggcccgca ggaacaggtc
     3541 ggccgcctcg gcggcatggt tcgagcgcag cgccgcatcg cccgccagcg ccaaggcgcg
     3601 cgccatgccg cgatagtcga gcgcctgctg gcgcccggcg gcggattgct cgaacagcgc
     3661 gagcgcctcg acgggctggt tggcgagcag cgcagcgcgg ccctgcagct cctgccggtc
     3721 ggctaaaaga tcggcctgct tggagggcgg cagggccgca atcgcctggg cgaggccccc
     3781 gccatcgccg cgctcggcgg cgaccaggcc acggatgaac caggcgcgcg gcacggtgtc
     3841 ggggtccttc gcggtccggc cgagcgcctc ctgggcggcg gcggaggcgc ccaaaagatc
     3901 gccgctgcga taggccgccg ccgcctgcac cagaaagagc tccgcgggca ccggtgcacg
     3961 ccgccggtcg aggtcggagc gcgcctcgcg caccgtgacg agggcggcct tggcgtcgcc
     4021 cgccttcatc tgggcaagcg ccaggttgta ggacacgtcg gcgatggcgc cggcatcgtc
     4081 gcgctc
//
LOCUS       DASWGA010000243         4750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1673888, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000243 DASWGA010000000
VERSION     DASWGA010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1673888"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /gene="cobU"
                     /locus_tag="VF991_05890"
     CDS             complement(<1..531)
                     /gene="cobU"
                     /locus_tag="VF991_05890"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0043752 - adenosylcobinamide kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HEX9556005.1"
                     /translation="MEHRPALLLPPVTLVLGGARSGKSTHAEKLVTGSLFGAAPRPAV
                     YIATAQAGDVEMATRIMAHRSRRGRGWTTIEEPLKLAEALETAAAHGQPVLVDCLTLW
                     LSNLMQAGDDIDEATDELLQSLDGYKSAVVFVSNEVGLGLVPETPLGRSFRDAQGRLN
                     MRIAECADRVILMAAGL"
     gene            complement(531..1373)
                     /locus_tag="VF991_05895"
     CDS             complement(531..1373)
                     /locus_tag="VF991_05895"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX9556006.1"
                     /translation="MKSQAELAAEQAAFWNGPGGQGWLAAYRRIERSIAPFSAELLAA
                     AAVRPGEHVIDVGCGTGATTAELARAVGATGHVLGIDISETLVEAARSHRVDNATFVV
                     GDAVTYPFHAGAYDLVFSRFGVMFFADPVAAFKNFRRALKPAGRLVFLCWRTPPENPW
                     GLVPLRAAQPFLPPMPRPGPDDPGQYSFGDRARVERILKEAGFATPAFQPIDRPVVLG
                     KDMADILDNTGRFGPLARAFADAEPAAIDKAKAAIATALEPHLGPDGVALPGACWLVS
                     AGRG"
     gene            complement(1370..2041)
                     /locus_tag="VF991_05900"
     CDS             complement(1370..2041)
                     /locus_tag="VF991_05900"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX9556007.1"
                     /translation="MATGARITGLVTRWWWVRHAPVPNPEARCYGQTDKDCDVSNRAL
                     FEHQARLLPKGAVWYASNLLRARKTAEQLAQAGADMDRLIIDPDLAEQHFGEWQGLTY
                     SEIAEKHGSNHLFWLGPPEHRPPGGESFVDLQGRAVRSIERLTEEHRGRDIVATAHGG
                     TIRAALALAFDLHPEAAVRFEIDNVSLTLIEHFEQAAPNHAWRVAFVNYMPRELVVAK
                     AAALA"
     gene            complement(2187..3014)
                     /gene="cobS"
                     /locus_tag="VF991_05905"
     CDS             complement(2187..3014)
                     /gene="cobS"
                     /locus_tag="VF991_05905"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008818 - cobalamin 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HEX9556008.1"
                     /translation="MTSPNEPFSDPPHESIGNRPSSFDDWLKAFKEQASFFTGIKLDV
                     GVPRWPLADVLPVLPVIGALVGLAAGLVFAIVRGLAGPGWLAGVLAVGAAIMITRALH
                     EDGLADTADGLGPHALEPARRLEIMRDSRNGTFGVLALALSVLIKVACLAQFNGATGL
                     VVLIGAHALSRAVIAYPLLAYSPVHSDGLGAQAGKPTDNDVWITIGIGAALAFLLLLG
                     KGFFVALLAPLAAIAVAWAASRWIADRIGGYTGDTLGAVQQKAEIAFLVVAALFIGH"
     gene            3048..4091
                     /gene="cobT"
                     /locus_tag="VF991_05910"
     CDS             3048..4091
                     /gene="cobT"
                     /locus_tag="VF991_05910"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008939 -
                     nicotinate-nucleotide-dimethylbenzimidazole
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HEX9556009.1"
                     /translation="MNAQTSPKLAATFDEMRRILRDLPGPDLSARTEVVRRQVELTKP
                     AGSLGRLEEIAEWLAAWQGRASPRVEHPRIAVFAGSHGVAARGVSAYPPEVTGQMVKN
                     FLAGGAAINQLAQSIDADLRIYELDLAHPTHDFTQGVAMSEERAANAMAYGMMAAEPG
                     IDVLCLGEMGIANTTTAATLSAALFGGSGADWAGPGTGVNGAALAHKVAVIDEALAHH
                     QQAIAKRDPLTLLAAVGGEELAAIAGAVLAARMGRIPVLLDGYACTAAAAVLYAVDRH
                     ALDHCLVAHRSAEPGHTRLLQAIGQRPLLDMDMRLGEGSAAALAVPLLKAAAACHNGM
                     ATFAQAGVSSRDA"
     gene            4119..>4750
                     /locus_tag="VF991_05915"
     CDS             4119..>4750
                     /locus_tag="VF991_05915"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF020090.4"
                     /note="AroE; catalyzes the conversion of shikimate to
                     3-dehydroshikimate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEX9556010.1"
                     /translation="MTLPGRRLVGLIGSNIGKSLSPALHEDAFAAAGMVGHYHLMDVS
                     VLSGRRLEDLLTAARTAGFAGLNITHPFKEAVIPLLDSLSPEAAEIGAVNTVVIDKDG
                     RMTGHNTDRSGFRHAFLEELGEASVRDKPVLLLGAGGAGRAVGFALMDMGASLIKVHD
                     LDTARAKGLCADLAARFGTDRCALSSEPASEAAAVAGIVNATPVGMQGYPG"
BASE COUNT          740 a         1656 c         1661 g          693 t
ORIGIN      
        1 gaggcccgcc gccatcagga tcacccggtc ggcacactcg gcgatccgca tgttcaggcg
       61 gccctgcgcg tcgcggaacg agcggccgag cggcgtctcg ggcacgaggc cgaggcccac
      121 ttcgttgctg acgaaaacca ccgccgattt gtagccgtcg aggctctgca gcagctcgtc
      181 ggtcgcctcg tcgatgtcgt cgccggcctg catgaggttg gacagccaaa gtgtgaggca
      241 gtcgaccagc accggctggc cgtgcgccgc cgccgtctcg agcgcctcgg cgagcttcaa
      301 cggctcctcg atggtggtcc agccccggcc gcggcggctg cgatgggcca tgatgcgggt
      361 cgccatctcg acgtcgccgg cctgggcggt ggcgatgtag accgccggcc gcggtgcggc
      421 gccaaacagg ctgccggtca ccagcttctc ggcatgcgtg ctcttgcccg agcgcgcgcc
      481 gcccagcacc agggtgaccg gcggcagcag cagggccgga cgatgttcca tcaaccccgg
      541 cccgcgctca ccagccagca agcccccggc aaggcgacgc cgtcgggccc aagatgcggt
      601 tcgagcgccg tggcgatggc ggccttggcc ttgtcgatcg ccgccggctc ggcgtcggcg
      661 aaggcgcgcg ccagggggcc gaagcgaccg gtgttgtcta aaatgtcggc catgtccttg
      721 ccaaggacga ccggccggtc gatcggctgg aaggccggcg tggcgaagcc tgcctccttg
      781 aggatgcgct cgaccctggc gcgatcgcca aaggaatact ggccgggatc gtccggcccg
      841 ggtcgcggca tcggcggcag gaagggctgg gcggcgcgca atggcacgag gccccaggga
      901 ttttccggtg gcgtccgcca gcacagaaag accaggcggc ccgcgggctt gagagcgcgc
      961 cggaaatttt tgaacgccgc caccggatcg gcgaagaaca tgacgccgaa gcgcgagaaa
     1021 accagatcgt aggcgccggc gtggaaggga taggtgacgg catcgccgac gacgaaggtg
     1081 gcgttgtcca cccggtgcga ccgcgccgcc tcgaccaggg tctcggaaat gtcgatgccc
     1141 agcacatggc cggtcgcgcc gacggcgcgt gccaactcgg cggtcgtggc gccggtgccg
     1201 cagccgacat cgatcacgtg ctcgcccggc cgcacggcag ccgcggccaa aagctcggcg
     1261 ctgaaggggg cgatgctgcg ctcgatgcgc cggtaggcgg ccagccagcc ctgtccgccc
     1321 gggccgttcc agaaggcagc ctgttccgct gcgagctccg cttggctctt catgccaacg
     1381 ccgcggcctt ggccacgacc agctcgcgcg gcatgtaatt cacgaaggcg acccgccagg
     1441 catggttggg ggcggcctgc tcgaaatgct cgatcagagt cagcgacacg ttgtcgatct
     1501 cgaagcgtac cgccgcctcg ggatgcagat cgaaggccag cgcgagcgcc gcgcggatcg
     1561 tgccgccatg cgccgtcgcc acgatgtcgc ggccgcgatg ctcctcggtc agccgttcga
     1621 tgctgcgcac ggcgcggccc tgcaaatcga cgaagctctc gccgcccggc ggccggtgct
     1681 cgggaggccc gagccagaac aggtggttgc tgccgtgctt ctcggcgatc tcgctatagg
     1741 tgaggccctg ccattcgccg aaatgctgct cggccagatc gggatcgatg atgagccggt
     1801 ccatgtcggc accggcctgg gcgagctgct cggcggtctt gcgcgcccgc aacaggttcg
     1861 aggcgtacca cacggcgccc ttgggcagca gccgcgcctg gtgctcgaac aacgcccggt
     1921 tgctgacgtc gcaatccttg tcggtctggc catagcagcg cgcctcggga ttgggcaccg
     1981 gcgcatgccg cacccaccac caacgcgtga ccaatcccgt gatcctggcg cccgtcgcca
     2041 tgctctctga cctccttctc ttctcataat tcctctcccc ccggtggggg agaggttagg
     2101 tgagggggtt gcacgagcca tcgaaccccc tcacccagcc tctcccccta gcgggggaga
     2161 ggagctcgag tggtcgcgtc gaggttctaa tggccgatga acagcgccgc caccaccaga
     2221 aaggcgatct cggccttctg ctggacggcg cccagcgtgt cgccggtgta gccgccgatg
     2281 cggtcggcga tccagcgcga ggcggcccat gccaccgcga tggccgcgag cggcgccaaa
     2341 agggcgacga agaagccctt gcccagcagc agcaggaagg ccagcgccgc gccgatgccg
     2401 atggtgatcc agacgtcgtt gtcggtcggc ttgccggctt gcgcgccgag cccatccgaa
     2461 tgcaccggcg agtaggcgag caagggatag gcgatcacgg cacgcgacag cgcgtgggct
     2521 ccgatcaaca cgaccaggcc ggtggcgccg ttgaactgcg ccaggcaggc gaccttgatc
     2581 agcaccgaga gtgccagcgc cagcacgccg aaggtgccgt tgcggctgtc gcgcatgatc
     2641 tccagccgcc gcgccggctc gagcgcatgc ggccccagcc cgtcggcggt gtcggccagg
     2701 ccgtcttcat gcagggcgcg cgtgatcatg atcgccgcgc cgaccgccag cacgccggcg
     2761 agccagcccg gaccggcgag gccgcgcacg atggcgaaca ccagccctgc ggccagcccg
     2821 accagcgcgc cgatgaccgg cagcaccggc aagacgtcgg ccagcggcca gcgcggcacg
     2881 ccgacatcga gcttgatgcc ggtgaagaat gacgcctgtt ccttgaaggc ttttagccag
     2941 tcgtcgaacg acgacgggcg gttgccgatc gattcgtggg gagggtcgct gaagggctcg
     3001 tttggactgg tcatggtgga gcgactatag gatggtccgc gcctgccatg aatgcccaga
     3061 cctcacctaa attggctgcc actttcgacg aaatgcgccg catcctgcgc gacctgccgg
     3121 gaccggacct ttccgccagg accgaggtgg tgcgccgcca ggtcgagctg accaagccgg
     3181 cgggctcgct gggccggctg gaggagatcg ccgaatggct cgccgcctgg cagggccgcg
     3241 ccagcccgcg ggtcgagcat ccgcgcatcg cggtgttcgc cggcagccac ggcgtggcgg
     3301 cgcgcggcgt gtcggcctat ccgccggaag tcaccggcca gatggtgaag aattttttgg
     3361 cgggcggtgc ggccatcaac cagctcgccc aaagcatcga cgccgacctg cgcatctacg
     3421 agctcgacct cgcccatccg acgcacgact tcacgcaagg cgtggcgatg agcgaggagc
     3481 gcgcggccaa cgccatggcc tacggcatga tggcggccga gcccggcatc gacgtgctgt
     3541 gtctcggcga aatgggcatc gccaacacca cgacggcggc gaccttgtcg gccgcgttgt
     3601 tcggcggcag cggcgccgac tgggcgggac cgggcaccgg cgtcaacggc gccgcgctcg
     3661 cccacaaggt cgccgtcatc gacgaggcgc tggcgcatca ccagcaggcg atcgccaagc
     3721 gcgatccgct caccttgctg gccgccgtcg gcggcgagga gctggccgcc attgccggcg
     3781 ccgttttagc cgcccgcatg ggccgcatcc ccgtgctgct cgacggctat gcctgcaccg
     3841 ccgcggccgc cgtgctctat gccgtcgatc gccacgccct cgaccattgc ctggtcgccc
     3901 atcgctcggc cgagcccggc cacacgaggc tattgcaggc gatcggccag cggccgctct
     3961 tagacatgga catgcggctg ggcgaaggct cggccgcggc gctggcggtg ccgctcttga
     4021 aggccgccgc cgcctgccac aacggcatgg cgaccttcgc gcaggcgggc gtgagctcgc
     4081 gggatgccta ggccgggcgc tcgcaggcag gcgcggccat gacgctccct ggacgcaggc
     4141 tggtcggcct gatcggcagc aacatcggca agtcgctgtc gccggcattg cacgaggatg
     4201 ccttcgcggc ggccggcatg gtgggccact accatctgat ggacgtttcc gtcctgagcg
     4261 ggcggcggtt ggaagatctg ctgacggcgg cgcgcaccgc ggggttcgcc ggtctcaaca
     4321 tcacccatcc tttcaaggaa gcggtgattc cgctcctcga ttcgctgtcg cccgaggcgg
     4381 ccgagatcgg cgcggtcaat accgtggtga tcgacaagga cggccgcatg acgggccaca
     4441 acaccgaccg gtccggcttc cggcacgcct tcctggaaga gctgggcgag gcctcggtgc
     4501 gagacaagcc cgtcctgcta ttgggcgccg gcggcgccgg gcgcgccgtg ggcttcgcct
     4561 tgatggacat gggcgccagc ctgatcaagg tccacgatct cgacaccgcc cgcgcgaaag
     4621 gcctctgcgc cgatctcgcc gcacgcttcg gcacggaccg ctgtgcgctc tccagcgagc
     4681 ctgcgagcga agcggctgcc gtcgcgggca tcgtcaacgc aacgccggtc ggcatgcaag
     4741 gttatccggg
//
LOCUS       DASWGA010000244         1565 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1418759, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000244 DASWGA010000000
VERSION     DASWGA010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1418759"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..799)
                     /locus_tag="VF991_05920"
     CDS             complement(53..799)
                     /locus_tag="VF991_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9556011.1"
                     /translation="MASLSGKTALVTGASRGIGRASALALAAAGAQVLVHYGSSEKEA
                     DAVIAVIREAGGKAEKVGADLRKPEGPHALARQVRAIVGDRLDILVAHAGISKAASIE
                     DTTLEDFDRLFAVNVRAPYFLVQQLLPVLSKGSTIIFTSSLVARASAGTLPAYAATKG
                     AIDTLVKHFAAALGSRGIRVNAVAPGVVETDMSSFTKTEAGRETALGMQALKRLAQPD
                     DIAPVVAFLASEDARWITGDSLHVDGGSKL"
     gene            complement(811..1551)
                     /locus_tag="VF991_05925"
     CDS             complement(811..1551)
                     /locus_tag="VF991_05925"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase family protein"
                     /protein_id="HEX9556012.1"
                     /translation="MANLTNKTALVTGASRGIGAAIAKRLAADGASVAITYTKGADAA
                     ARVVKDIEGAGGKAIAIQADATDAKAVSAAVEKTVKTFGRLDILVNNAGTALPKPFEE
                     ATLEELDRMIDLNVRGVFIATQAALKHLRDGGRIISIGSCVGERMMTPGLAAYSATKG
                     AVKMFTQGLSREVGPRGITVNNVQPGPIDTELNPADGEWATPQIANTALKRYGHVDDV
                     AALVAFVAGPDASYITGASLTVDGGTNA"
BASE COUNT          216 a          518 c          557 g          274 t
ORIGIN      
        1 agaaccacat cgatactggg ctcattgcgc atatcgcctt ggtggagccc gcttagagct
       61 tggaaccgcc atcgacatgc agcgagtcgc cggtgatcca gcgcgcatcc tcggaggcca
      121 ggaacgccac caccggcgcg atgtcgtccg gctgcgccag gcgcttgagg gcctgcatgc
      181 cgagcgcagt ctcgcgcccg gcctcggtct tggtgaaact cgacatgtcg gtctccacca
      241 cgcccggggc aacggcgttg acccggatgc cgcgggagcc cagcgcggcg gcgaagtgct
      301 tcaccagggt gtcgatggcg cccttggtcg cggcataggc cggcaaggtg ccggccgaag
      361 cgcgggcgac gagcgaggac gtgaagatga tcgtgctgcc cttgctcagc accggcagca
      421 gctgctgcac caggaagtac ggcgcgcgga cgttgacggc gaacagcctg tcgaagtcct
      481 cgagcgtggt gtcctcgatg ctggccgcct tggagatacc ggcgtgggcg accaggatgt
      541 cgaggcggtc cccgacgatg gcgcggacct gcctggccag ggcgtgcgga ccttcgggct
      601 tgcgcaggtc ggcaccgacc ttttcggcct tgccgccggc ctcgcggatc acggcaatga
      661 cggcgtccgc ctccttctcg ctgctgccat aatgcaccag cacctgggcg ccggctgcgg
      721 cgagcgccag cgcgctcgcg cgaccgatgc cgcgcgaggc gccggtgacc agggccgttt
      781 ttccggaaag actggccatg gtcatggtcc tcaggcgttg gtgccgccgt cgacggtcag
      841 gctggcgccg gtgatgtagc tcgcgtccgg gccggcgacg aaggccacca gcgcggcgac
      901 gtcatcgaca tggccgtatc gcttcagcgc cgtgttggcg atctgcggcg tcgcccactc
      961 accgtcggcg gggttcagtt cggtgtcgat cgggccgggc tggacgttgt tcaccgtgat
     1021 gccgcggggg ccgacctcgc gggacaggcc ttgcgtgaac atcttcaccg cgcccttggt
     1081 cgcggagtaa gccgccaggc ccggcgtcat catccgctcg cccacgcagg agccgatgct
     1141 gatgatgcgg ccgccgtccc gcaggtgctt gagcgcggcc tgggtggcga tgaacacgcc
     1201 gcgcacgttg aggtcgatca tccgatccag ctcttccagg gtggcctctt cgaagggctt
     1261 ggggagggcg gtgcccgcat tgttcaccag gatgtcgagc cggccgaagg tcttgacggt
     1321 cttttccacc gcggcgctga cggccttggc gtcggtcgca tccgcctgga tcgcgattgc
     1381 cttgccgccg gcgccctcga tgtctttcac cacccgggcg gcggcatcgg cgcccttggt
     1441 ataggtgatc gccacgctgg cgccgtcggc ggccagccgc ttggcgatgg ccgcgccgat
     1501 gccacgggaa gcgccggtga cgagagctgt cttgttggtc aggtttgcca tgggatgtgt
     1561 ccttt
//
LOCUS       DASWGA010000245         2843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1674071, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000245 DASWGA010000000
VERSION     DASWGA010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1674071"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..713)
                     /locus_tag="VF991_05930"
     CDS             complement(114..713)
                     /locus_tag="VF991_05930"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEX9556013.1"
                     /translation="MIFDCDGVLVDSEPIANASFSRALKAHGLDWTVEETMRRLMGRS
                     LKSAVEICEAEIGRKLPDDFLEKMQAVTYQNFRDAPLKPVAGVKEAVLALQKAGVATC
                     VASSGLPEKMRFTLGLTGLWDLFDGRIFSASQVPRGKPFPDLFLHAAIGMNVQPFECT
                     VVEDSVPCIQAARSAGMRALAFAGAPYADRAALAAAGGE"
     gene            complement(817..1701)
                     /locus_tag="VF991_05935"
     CDS             complement(817..1701)
                     /locus_tag="VF991_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9556014.1"
                     /translation="MQGSLRGNSGPRYRHTADEGAPYETIAVDKLTPIIGAEIAGIDL
                     STPLSNRQQDELHRALAENSVIFFRDQHITLDQHVAFGRLFGELHVHPAAPHEPGRPE
                     LMIIHADKDSPRANGEGWHTDVSCDTEPPMGSILYIKTCPPKGGDTLFASMYAAYEAL
                     SDRMKTYLEGMTAIHDGEQVYRGLYKNFGVADKPQYPRAEHPVVRTHPVTGKKALYVN
                     RGFTRALTGVPRDEGDGILSYLYQHMENPLFQCRFRWRENSIAFWDNRCVQHRAMWDY
                     WPHTRSGNRVTVAGDKPY"
     gene            1758..>2843
                     /locus_tag="VF991_05940"
     CDS             1758..>2843
                     /locus_tag="VF991_05940"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEX9556015.1"
                     /translation="MPIFDAIASQTVRKAQHLEPAFVHQADVEAATRKLKARKKKPNI
                     LIYLMDDVGWGDFGCYGGGVAVGAPTPNFDRLARQGLQLTSCYSEPSCSPSRATLHTG
                     RVPNRHGLHRPPMYGEPGGLQGEVTLPMLLGQAGYTTQAVGKWHLGENVESQPQHVGY
                     DDFYGFLSVSDMYTEWRDPHFFPEIVYSAARTEWIKNMPFNRCFVHAKKGGELSNVEE
                     VTIPVLSELDEKWCRYSIDFIQQQAKADKPWLLYHCTRGAHFDNYPHEKYLGKSPARH
                     PYKDTMLELDDIMGRLVDALRESGQLEDTLIFISSDNGPHMETWPDAAFTPFRCAKGS
                     TWEGGVRVPGLMVWPGLIEAGRQSDGLF"
BASE COUNT          482 a          939 c          942 g          480 t
ORIGIN      
        1 caggcccgcc atgccggcgc cgaccacgat cacgcgctca ggcctagcgc tccccatgga
       61 ccacgagccg gtcatcgcag caccaggccg ggcaacgtcg tcatgtcgtc gaactactcg
      121 ccgcccgccg ccgccagggc ggcgcgatcg gcataaggcg caccggcaaa ggcaagggcg
      181 cgcattccgg cggaacgcgc cgcctggatg cagggcacgg agtcctcgac gacggtgcat
      241 tcgaacggct gcacgttcat accaatggca gcgtggagga agagatcggg gaacggcttg
      301 ccacgcggca cctggctcgc gctgaagatg cggccgtcga acaggtccca cagcccggtc
      361 agtcccagcg tgaagcgcat cttctcaggc aagcctgaac ttgccacgca ggtggcgaca
      421 cccgccttct gcaacgccag caccgcctcc ttcacgccgg cgaccggctt gagcggcgca
      481 tcgcggaagt tctggtaggt caccgcctgc atcttctcga ggaaatcgtc gggcagcttg
      541 cggccgatct cggcttcgca gatctcgacg gccgacttga gcgaacggcc catcaggcgg
      601 cgcatcgtct cctcgaccgt ccagtcgagg ccatgtgctt tcagcgcacg ggaaaagctc
      661 gcgttggcga tcggctcgct gtcgaccagc acgccgtcgc agtcgaagat cactaacaag
      721 gtcggcctgt tttggggctt tccccctccg ccccttcatc aaacaattgg ggggcacctc
      781 ccccgtctga cgggggaggc agggtggggg aaggcatcag tatggtttat cgcccgccac
      841 agtgacgcgg ttgccgctgc gcgtgtgcgg ccagtagtcc cacatggcgc ggtgctggac
      901 gcagcgattg tcccagaagg cgatcgagtt ctcgcgccag cggaagcggc actggaacag
      961 cgggttctcc atgtgctggt agagatagct gaggatgccg tcgccctcgt cgcgcggcac
     1021 gcccgtcagg gcgcgggtga agccgcgatt gacgtacaag gccttcttgc cggtcaccgg
     1081 atgggtgcgc accacgggat gctcggcgcg cggatattgc ggcttgtcgg cgacgccgaa
     1141 gttcttgtag aggccgcgat agacctgctc gccgtcgtgg atggcggtca tgccctcgag
     1201 ataggtcttc atgcggtccg acagcgcctc gtaggcggcg tacatcgagg cgaacagcgt
     1261 gtcgccgccc ttgggcgggc aggtcttgat gtagaggatg ctgcccatcg gcggctctgt
     1321 gtcgcagctc acgtcggtgt gccagccctc gccgttggcg cgcggcgagt ccttgtcggc
     1381 atggatgatc atcagctcgg ggcggccagg ctcgtgcggt gcggcgggat ggacgtgcag
     1441 ctcgccgaac agccggccga acgccacgtg ctggtcgagc gtgatgtgct ggtcgcggaa
     1501 gaagatcacg ctgttctcgg ccagcgcccg atgcagctca tcctgctggc ggttgctgag
     1561 cggcgtgctg agatcgatgc cggcgatctc cgcgccgatg atcggcgtca gcttgtcgac
     1621 ggcgatggtc tcgtacgggg cgccctcgtc ggcggtgtgc cggtagcggg ggcctgaatt
     1681 gccgcgcagt gatccttgca tggctgtctc ctactcggtg cccatagtat agcgtgagcc
     1741 aagacttggg ggaaaacatg cctattttcg acgccatcgc ctcgcaaacc gtgcgcaagg
     1801 cccagcatct cgagcccgcc ttcgtgcacc aggccgacgt cgaagccgct acgcggaagc
     1861 tcaaggcacg caagaagaag cccaacatcc tgatctacct gatggacgat gtcggctggg
     1921 gcgatttcgg ctgctacggc ggcggtgtcg cggtgggcgc gccgacgccc aatttcgaca
     1981 ggctggcgcg gcagggcctc cagctcacgt catgctattc ggagccctcc tgctcgccct
     2041 cgcgcgccac gctgcatacc gggcgcgtgc ccaaccgcca tggcctgcac cgtccgccga
     2101 tgtacggcga gccgggcggc ctgcagggcg aggtcaccct gccgatgctg ctgggccaag
     2161 cgggctacac cacgcaggcg gtgggcaagt ggcatctcgg cgagaacgtc gagagccagc
     2221 cgcagcatgt cggctacgac gacttctacg gcttcctgtc ggtgtcggac atgtacaccg
     2281 aatggcgcga cccgcacttc ttccccgaga tcgtctactc cgccgcgcgc accgagtgga
     2341 tcaagaacat gccgttcaac cgctgcttcg tgcacgccaa gaaaggcggc gagctcagca
     2401 acgtcgagga ggtgacgatc cccgtgctct ccgagctcga cgagaaatgg tgccgctatt
     2461 cgatcgactt catccagcag caggccaagg ccgacaagcc gtggctgctc taccactgca
     2521 cgcgcggcgc acacttcgac aactatccgc acgaaaaata tctcggcaag tcgccggcca
     2581 ggcaccctta caaggacacc atgctggagc tcgacgacat catgggccgg ctggtcgacg
     2641 cgttgcgcga atcgggccag ctcgaggaca cgctgatctt catctcctcg gacaacggcc
     2701 cgcacatgga gacctggccg gacgccgcct tcacgccgtt ccgctgcgcc aagggttcga
     2761 cctgggaggg cggcgtgcgc gtgcccggcc tcatggtctg gccgggcctg atcgaggccg
     2821 gccgccagag cgacgggctg ttc
//
LOCUS       DASWGA010000246         4900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1548871, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000246 DASWGA010000000
VERSION     DASWGA010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4900
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548871"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1147)
                     /locus_tag="VF991_05945"
     CDS             complement(<1..1147)
                     /locus_tag="VF991_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9556016.1"
                     /translation="MDDIAARRLGADELEQNFADIHVPLDRKRALIEASRCYFCYDAP
                     CLQACPTGIDIPGFIRKIATDNVKGAATTILSENVMGGACARVCPVEILCEAACVREA
                     QESKPVQIGALQRYATDWLFERKLQPFTRAPATGKRIAVVGAGPAGLACAHRLALRGH
                     DVTAFEARPKAGGLNEYGVAAYKVPNDFAQAEVAFILDIGGIRIEHGKALGGDITLAK
                     LRRNFDAVFLGMGLAGVKALALEGEDMAGVMDAVAYIERLRQAKDKGALEIGRRVVVI
                     GGGNTAIDIAVQARRLGAKDVTIVYRRGPEQMSATWHEQELAQTTGVSIKHWARPARL
                     IGQKGRLKEVEFEYTQLDEQGRLMTTGDRFTLLADMLFKAIGQNFVAS"
     gene            1248..1895
                     /locus_tag="VF991_05950"
     CDS             1248..1895
                     /locus_tag="VF991_05950"
                     /inference="COORDINATES: protein motif:HMM:NF019961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9556017.1"
                     /translation="MPSPRPRKISANGRGRIRESNESRLLKAAETVFAERGFSGATTA
                     AIAARAKLPKANLHYYFRTKAELYRAVLANVLELWLDELDRFTPDREPSDAIAEYVAG
                     KLYWSRVRPNASKVFANEILHGAPFLESYLARDLRQRVEQKAKVIRQWIRSGKLRPVD
                     PKHFIFQLWASTQHYADFDVQVRAVLGRRKLGERDFAAAAANITALILDGCLTRG"
     gene            complement(2061..2924)
                     /locus_tag="VF991_05955"
     CDS             complement(2061..2924)
                     /locus_tag="VF991_05955"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEX9556018.1"
                     /translation="MTIVKGGLIQMALKGDTTMSPDQIRERMVAAHIPLIEEAGRKGV
                     EVLCLQEVFTQPYFCPSQDAKWYAAVERIPEGPTTKLMQELAKKHSMVIVVPIYEEDF
                     TGVYYNTAAVIDGDGKYLGKYRKNHIPQVAGFYEKFFFKPGNLGYPVFQTAYCKLGVY
                     ICYDRHFPEGWRALALNGAEYIVNPSATVAGLSQYLWELEQPAAAVANGCYIGAVNRV
                     GTEQPWSIGRFYGSAYFVNPRGKIIAKASEDKDELLVADMDWDMVREVRNLWQFYRDR
                     RPETYASLAQI"
     gene            3182..4423
                     /locus_tag="VF991_05960"
     CDS             3182..4423
                     /locus_tag="VF991_05960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HEX9556019.1"
                     /translation="MVANVLEVNPERLWASLERSAEIGRFRDVGLRRLALSAEDKQMR
                     DLFVEWAQAAGCRVEIDRLGNIFARRAGSDPSLPPVAIGSHLDTQICGGRYDGILGVL
                     CGLEVVRTLNDRGLSTKRGIEVICWTNEEGARFSPPMMGSMAFAKVLPLDSVLATSDE
                     SGVTVAEALDAIGYAGPAPLGQRAFDAYLELHIEQAPVLDREGCDIGIVVGGYRTQAL
                     RLTINGDTGHAGGTPMAMRRNALVGAGYVIAAVNDIGLAFAADEGRTTTTRIESFPNL
                     PGTYAEEVKLTIDFRHIDAARFQAMRTEIDAAIAAAARKANVEIEVAEGWSWGTELFA
                     PECIDLLKSTARELGLPYREMRSQAGHDAYAVATMAPTAMIFTPCFEGISHNVNEAIE
                     LTRSVPGANLLLNATVARANR"
     gene            complement(4565..>4900)
                     /locus_tag="VF991_05965"
     CDS             complement(4565..>4900)
                     /locus_tag="VF991_05965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEX9556020.1"
                     /translation="HLVGVLPTGAHDWTLQNLENAIVINVILAVFNMIPLPPLDGGRV
                     AVGLLPNVLAVPLARLERYGMAIIIGLLFLLPMVGAQLGRDLNVVGWLLGGPVDAIIG
                     TILQLTGNA"
BASE COUNT          826 a         1614 c         1610 g          850 t
ORIGIN      
        1 gggaggccac gaagttctgg ccgatcgcct tgaacagcat gtcggcgagg agcgtgaagc
       61 ggtcacccgt ggtcatcagc cggccctgct cgtcgagctg ggtgtattca aactcgacct
      121 ctttcaggcg ccccttttgg cctatgaggc gcgccggccg tgcccagtgc ttgatgctca
      181 cgccagtggt ctgcgccagc tcctgctcgt gccaagtcgc gctcatctgc tcgggcccgc
      241 ggcgatagac gatcgtcaca tccttggcgc cgaggcgcct ggcttgcacg gcgatgtcga
      301 tcgcggtgtt gccgccgccg atcaccacca cgcggcgtcc gatctcgagg gcgcccttgt
      361 ccttcgcctg gcgcagacgc tcgatatagg cgacggcgtc catcacgccc gccatgtcct
      421 cgccttcgag ggcgagggct ttgacgccgg cgagtcccat gccgaggaac accgcgtcga
      481 agttccgccg cagcttcgcc agcgtgatgt cgccgccgag cgccttgccg tgttcgatgc
      541 ggatgccgcc gatatccagg atgaacgcca cctcggcctg cgcaaagtcg ttcggcacct
      601 tgtaggcggc gacgccgtat tcgttcaggc cgcccgcctt gggcctggct tcgaaggcgg
      661 tgacatcatg gccgcgcagc gccaggcgat gggcgcaggc gaggcccgcc gggccggcgc
      721 cgaccacggc gatgcgcttg ccggtcgctg gggcgcgcgt gaagggctgc agcttccgct
      781 cgaacagcca gtcggtggcg tagcgctgca gagcgccgat ctgcaccggc ttgctctcct
      841 gcgcttcgcg cacgcaggcc gcctcacaca ggatctcgac tgggcagacg cgtgcacagg
      901 cgccgcccat cacgttctcg ctcaggatgg tggtggcagc acccttcaca ttgtcggtcg
      961 cgatcttgcg gatgaaaccc gggatgtcga tgccggtcgg gcaggcctgc aggcagggcg
     1021 cgtcgtagca gaagtagcag cggctcgcct cgatcagggc gcgcttgcgg tcgagcggga
     1081 cgtgtatgtc agcgaagttc tgctctagtt cgtcagctcc caggcgccgt gccgcaatat
     1141 catccatatt gccccctgtc ttcggccggt acggtagcga cagtctgacc aaacggtcaa
     1201 gttcggcgct ggagcgacgc cagctgatcc tgtagcatca cggcttcatg ccctcgccgc
     1261 gaccccgcaa gatcagcgct aacggccgcg gtagaattcg cgaaagcaac gaatcacgcc
     1321 tgctgaaggc ggccgagacc gtgttcgccg agcgcggctt cagcggcgcc accaccgccg
     1381 cgattgcggc gcgcgccaag ctgcctaagg ccaacctgca ctactacttt cggaccaagg
     1441 ccgagctcta ccgcgccgtg ctggccaacg tgctggagct gtggctcgac gagctcgacc
     1501 gcttcacgcc cgaccgggaa ccctcggacg ccatcgccga atacgtcgcc ggcaagctgt
     1561 actggtcgcg cgtccggccc aatgcctcga aggtcttcgc caacgagatc ctgcacggcg
     1621 cgccgttcct cgaatcctac ctggcgcgcg atctgcggca gcgggtcgag cagaaggcga
     1681 aggtgatccg ccagtggatc cgcagcggca agctcaggcc ggtcgatccc aagcacttca
     1741 tcttccagct gtgggcgtcg acgcagcact atgccgactt cgacgtgcag gtccgcgccg
     1801 tgctgggccg caggaagctc ggcgagcgcg atttcgccgc cgcggcggcc aacatcacgg
     1861 cgctgattct cgacggctgc ctgacacggg gctgactctc ttgccggacc gcgggcctcc
     1921 aggcccgcat ctttctcttg gctgggagcg cgcaactccg attgcgcgtg ttcgtatcca
     1981 gcagcgtatg agcgccacgg agtggcgcgc tcccagccat gagcgggcct ggaggcccgc
     2041 ggtccgccaa gatagcggat ctagatctgc gccagactcg cgtaggtctc cggtcggcgg
     2101 tcgcgataga actgccagag gttgcgcact tcgcgcacca tgtcccagtc catgtcggcg
     2161 accaggagtt cgtccttgtc ctcgctcgcc ttggcgatga tcttgccgcg cggattgacg
     2221 aaataggccg agccatagaa gcggccgatg ctccagggct gctcggtgcc gacacggttg
     2281 acagcgccga tgtagcagcc gttggccacg gccgccgccg gctgctcgag ctcccagaga
     2341 tactggctga ggccggccac ggttgcggag ggattgacga tatattccgc gccgttcagc
     2401 gccagcgccc gccagccttc ggggaagtgg cggtcgtagc agatatagac gccgagcttg
     2461 cagtaagcgg tctggaaaac cggatagccg agattgccgg gcttgaagaa gaacttttcg
     2521 tagaagcctg cgacctgcgg gatgtggttt ttgcggtact tgccgagata cttgccgtcg
     2581 ccgtcgatca ccgcggcggt gttgtaatag acgccggtga agtcttcctc gtagatcggc
     2641 accacgatca ccatggagtg cttcttggcc agctcctgca tcagcttggt ggtcgggcct
     2701 tcgggaatgc gctcgacggc ggcataccac ttggcgtcct ggcttgggca gaaatagggc
     2761 tgggtgaaaa cttcctgcag acacaatacc tcgacgccct tgcggccggc ttcctcgatc
     2821 agcgggatgt gcgccgccac catgcgctcg cggatctggt ccggcgacat cgtcgtgtca
     2881 cccttgagcg ccatctggat caggccgccc tttacgatag tcataggtca tctccgcttg
     2941 atcatgccct tcacagggta gcgcggcgag gtatcgagtg gcagagcaaa ttgtgatggc
     3001 aaatccgaag ggctcccacc gcccacgttg cccgaaggcg cgcgcgggct gcatggggtg
     3061 acgggcgagc cccgcggtgc atgacgcggt atggaagctt gttgccagta acgccggtgg
     3121 cacgcttctt ggtagactgt catcacctct ggagaacgct gcaaacaaaa ggagcccccg
     3181 cgtggtcgcc aatgtcttgg aggtcaatcc cgaacgcttg tgggcgagcc tcgagcgctc
     3241 ggcggagatc gggcggtttc gcgatgtcgg cctgcgccgg ctggcgctgt cggccgagga
     3301 caagcagatg cgcgacctgt tcgtcgagtg ggcgcaggcg gcgggctgca gggtcgagat
     3361 cgaccggctg ggcaatatct tcgcgcggcg cgccggcagc gatccgtcgc tgccgccggt
     3421 cgccatcggc agccatctcg acacccagat ctgcggcggc cgctacgacg gcattttggg
     3481 cgtgctgtgc ggtctggaag tggtgcgcac gctgaacgac cgcgggcttt ccaccaagcg
     3541 cggcatagaa gtcatctgct ggaccaacga ggagggcgcc cgcttcagcc cgccgatgat
     3601 gggctccatg gccttcgcca aggtgctgcc cctcgacagc gtgttggcga cgtcggacga
     3661 gtcaggcgtc acggtcgccg aggcgctcga cgcgatcggc tatgccggcc ccgcgccgct
     3721 ggggcagcgc gcgttcgatg cctatctcga gctgcacatc gaacaggcgc cggtgctcga
     3781 tcgcgagggc tgcgacatcg gcatcgtggt cggcggctac cggacgcagg cgctccggct
     3841 caccatcaac ggcgacaccg gccatgccgg cggcacgccg atggcgatgc ggcgcaacgc
     3901 cctggtcggc gccggctacg tcatcgccgc ggtcaacgat atcggcctcg cttttgcggc
     3961 cgacgaaggg cgcaccacca cgacccggat cgaaagcttt cccaacctgc ccggcaccta
     4021 tgccgaggag gtcaagctca ccatcgattt ccgccacatc gatgcggcgc gcttccaggc
     4081 catgcgcacc gagatcgacg ccgcgatcgc ggccgccgcc cgcaaggcca atgtcgagat
     4141 cgaggtcgcc gaaggctgga gctggggcac cgagctgttt gcgccggaat gcatcgacct
     4201 cttgaagtcg accgcccggg agctcggctt gccctatcgc gagatgcgca gccaagccgg
     4261 ccacgacgcc tatgccgtgg cgacgatggc gccgacggca atgatcttca cgccctgttt
     4321 cgagggcatc agccacaatg tgaacgaggc gatcgagctc acccgctcgg tgcccggcgc
     4381 caatctcctg ctgaacgcca ccgtggctag ggccaatcgt tagtaccctc aatcacaaat
     4441 tccggtgacg gcagtcattt ctgtcgtcct gagcggagcg aaggacctca tgtcattcaa
     4501 accagcatgc cggtcgcaat cgccatgaga tccttcgctt cgctcaggat gacggcgggt
     4561 gcgctcaagc gttgccggta agctggagaa tggtgccgat gatcgcgtcg accggcccgc
     4621 ccagcagcca gccgacgacg ttgagatccc ggccgagctg ggcgcccacc atcggcagga
     4681 ggaagagcaa accgatgatg atggccatgc catagcgctc cagccgggcc aggggcacgg
     4741 cgagcacatt cggcaacaaa cccaccgcaa cacggccgcc gtcgagcggc ggcaggggga
     4801 tcatgttgaa gacggccagg atgacgttga tgacaatcgc attctcgagg ttctgcagcg
     4861 tccagtcgtg agcgcccgtg ggcaggacgc cgacgaggtg
//
LOCUS       DASWGA010000247         7476 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2057890, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000247 DASWGA010000000
VERSION     DASWGA010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7476
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2057890"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VF991_05970"
     CDS             <1..252
                     /locus_tag="VF991_05970"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HEX9556021.1"
                     /translation="AQGVDALYAFAATANVVPGHLFDATHAALIADEAVRSAMVENNP
                     AATAAIAARLRDALARGLWTTRRNAVDHELERALTEAGS"
     gene            249..1445
                     /gene="cobG"
                     /locus_tag="VF991_05975"
     CDS             249..1445
                     /gene="cobG"
                     /locus_tag="VF991_05975"
                     /EC_number="1.14.13.83"
                     /inference="COORDINATES: protein motif:HMM:TIGR02435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_process: GO:0019250 - aerobic cobalamin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B synthase"
                     /protein_id="HEX9556022.1"
                     /translation="MSAVAAKGWCPGALRPMPSGDGLIVRVKPFCGALGLDQARGLAD
                     LADRLGNRHIDLTRRANLQLRGLSDERLPELQDALRRLALIDVDAESEATRNVMVAPL
                     AGLDPAESFDVRPLAAALERALTADRGLQALPAKFGLLVDGGGKISIAGERADICLAV
                     TEKGVAFGLDTPRGTTWLGSVAPERAAETAIAAMHAFLAVSPGGRLRTLAEVDAERVR
                     SSVQPFLSPLKTVPRAKGRRLGLLEVAVGIAAPFGRLEAPQLRRLAALAAETGATDIR
                     LSPWRTVYIGARHRAAALLDGAREAGLIVDDNDAILRIEACPGAPDCRSSSVDTRGDA
                     RRLAALAGERGYRGSIHVSGCAKRCARSAPSDLLLIGEDGLYRLGQRLVGQQDFPTLF
                     EAATDG"
     gene            1438..2070
                     /locus_tag="VF991_05980"
     CDS             1438..2070
                     /locus_tag="VF991_05980"
                     /EC_number="5.4.99.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016993 - precorrin-8X methylmutase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-8X methylmutase"
                     /protein_id="HEX9556023.1"
                     /translation="MAEPRAYIRDGAEIYRRSFAIIRAESDLARFTAAEERVAVRIIH
                     ACGMTEIARDIVMSPGFAERARMALLEGAPVLCDSKMVANGITRARLPKSNPIVCTID
                     DPAVPGLAQGLANTRTAAAMDLWRDRLDGAVVAIGNAPTALYRLLEMLDAGAPAPAVV
                     IGLPVGFVGAAESKEALAADGRVPFLIVRGRLGGSAMAVAAVNALASEQE"
     gene            2067..2825
                     /locus_tag="VF991_05985"
     CDS             2067..2825
                     /locus_tag="VF991_05985"
                     /EC_number="2.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030788 - precorrin-2
                     C20-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-2 C(20)-methyltransferase"
                     /protein_id="HEX9556024.1"
                     /translation="MTTLDTLAGNATAGTLYGIGVGPGDVRYLTLRAAGLVRAVDVLA
                     YFAKKGLPGNARRIVAPLIVEGRTERRLEYPVTDEMPAESAEYQLRISAFYRATADAL
                     ASLLRQGKSVGLLAEGDPFFYGSFMHMWRRLAPDFPVEVVPGVTGMSGCWTRANLPIT
                     WGNDTLAVLPGTLDEGRLVERLRLTDAAVIMKVGRNLGKVRRAVEAAGLLSRAVYVER
                     GTMQDERIVPLADCCQPTGAYFGMVLIPGEGRRL"
     gene            2822..3568
                     /gene="cobJ"
                     /locus_tag="VF991_05990"
     CDS             2822..3568
                     /gene="cobJ"
                     /locus_tag="VF991_05990"
                     /EC_number="2.1.1.131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030789 - precorrin-3B
                     C17-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HEX9556025.1"
                     /translation="MNGSLVVVGTGPGKAALMTGATQTALARATDLVGYGPYLDRVPR
                     RHHQRLHASDNRAELERARLALSLATEGRHVVVVSGGDPGVFAMASAVFEAVEAGDPA
                     WRELDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWSTIERRLTLAAEADFV
                     IALYNPASKARPHQLGQAFELLKKIKAAATPVLFVRAAGTADAEAVTTTLGTADPSRA
                     DMRTLVIIGASTTRRVGRWVYTPRGERGTP"
     gene            complement(3535..4293)
                     /locus_tag="VF991_05995"
     CDS             complement(3535..4293)
                     /locus_tag="VF991_05995"
                     /EC_number="1.3.1.106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016994 - precorrin-6A reductase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-6A reductase"
                     /protein_id="HEX9556026.1"
                     /translation="MRVLILGGTTEASNLARLLAGDSRFEATLSLAGRTTAPRPQPIM
                     TRVGGFGGADGLADFLRAQNIEAVIDATHPYAAQISANAVAACARANVPLASLVRPAW
                     TAQPDDVWKVVPTADAAAVALGKAPRRVFLTLGRQELHLFAAAPQHHYIARLIELPQQ
                     ASLPPELVLLRQRGPFDRDAERRLLQDEKIDVVVSKNSGGSATYPKIEAARALGLPVI
                     MIARPDKPAGHVVTSAEEAVTWLAHGVPRSPRGV"
     gene            4308..5549
                     /gene="cbiE"
                     /locus_tag="VF991_06000"
     CDS             4308..5549
                     /gene="cbiE"
                     /locus_tag="VF991_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046025 - precorrin-6Y
                     C5,15-methyltransferase (decarboxylating) activity
                     [Evidence IEA];
                     GO_process: GO:0046140 - corrin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6y C5,15-methyltransferase
                     (decarboxylating) subunit CbiE"
                     /protein_id="HEX9556027.1"
                     /translation="MTNERPTCTAVRWLSIVGIGEDGVAGISPIAQKLIASAELVVGG
                     KRHLGLADGLIRGHRLAWPNPIGAALPEIEKHRGRPVVVLASGDPFHYGVGDLLLRSI
                     PAAETLCLPQSSSFSLAASRLGWSLQDVALVSLHGRALEGVVRHLQPGARILALSWDG
                     ETPARLAKLLVERGMGSSSLTVLEAMGGPRERVRRTTAAGFDLDDVAPLNTIALEVAA
                     SDGAVVLGLAPGLDDSLFEHDGQLTKREVRAVTLSALAPRQGELLWDVGLGAGSIAIE
                     WLLRHPSLKAIGIEAEPERAARAARNAASLGTPDLEIVQKRAPKAFDGLPPPDAVFIG
                     GGLSDPRLFEAAWSALKSGGRLVANAVSLQSEARLIEYFQRHGGELVRLDVAKAGKAG
                     TGGVFVWRPAAPIIQWRARKP"
     gene            5546..5929
                     /locus_tag="VF991_06005"
     CDS             5546..5929
                     /locus_tag="VF991_06005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HEX9556028.1"
                     /translation="MIVAGVGCRRGTSADEIERVVRLALGLFELPAERLEAIATESEK
                     ATEPGFPEVARRLSVPLVACTVADLDRVAGRVLTASKLVLETKGLPSIAEASALVVAG
                     RNGRLLGTRVATERATCAIATGEGR"
     gene            5926..6687
                     /gene="cobM"
                     /locus_tag="VF991_06010"
     CDS             5926..6687
                     /gene="cobM"
                     /locus_tag="VF991_06010"
                     /EC_number="2.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0046026 - precorrin-4
                     C11-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-4 C(11)-methyltransferase"
                     /protein_id="HEX9556029.1"
                     /translation="MTVHFIGAGPGAPDLITVRGCELIGRCPVCLYAGSLVPKALLDH
                     CPPGARIVDTAPMSLDEIIAECRRATDEGHDVARLHSGDLSVWSALGEQLRRLDEVGI
                     AYTITPGVPAFAAAAAALGQELTLPELAQSVVLTRTSGRASAMPPGETLEAFAATGAT
                     LAVHLSIHAIDKVVASLLPFYGADCPVAVVYRASWPDERVIRATLGTIASEVTKNPIE
                     RTALILVGKVLGARDFRNSALYDAAYQRRFRGRAQ"
     gene            6684..>7476
                     /gene="cobA"
                     /locus_tag="VF991_06015"
     CDS             6684..>7476
                     /gene="cobA"
                     /locus_tag="VF991_06015"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEX9556030.1"
                     /translation="MSGLAIPDNFPELPDFPPGEVWLAGAGPGDPRLLTVLALHALAT
                     ADDVVHDALVDARVLRLARKGAELIPAGKRGGRPSPDQRDINEVLIERARLGRRVLRL
                     KGGDPFVFGRGWEEASALTAAGVRFRIIPGLTSGLAAAALAGIPATSRDTNHAVVLAA
                     GHRAEDGRSAADWAALAKLGQPLILYMPMAQLAEIAASLEQGGLSADTPATLIQAATT
                     AGERVIESRLGSLAADAAKHAIGSPSIVVIGAIADLRRQLLSSLVP"
BASE COUNT         1030 a         2573 c         2672 g         1201 t
ORIGIN      
        1 gcccagggtg tcgatgcgct ctatgccttt gccgcgaccg ccaacgtggt tcccgggcac
       61 ctcttcgatg cgacgcacgc tgccttgatc gccgacgaag ccgtgcggtc ggccatggtg
      121 gagaacaacc cggcggcaac ggccgccatc gccgcgcggc tgcgcgatgc gctcgcccgc
      181 gggctgtgga cgacccggcg caacgcggtc gatcatgagc tcgagcgcgc cctgaccgag
      241 gccgggtcat gagcgccgtc gcggccaaag gctggtgccc cggcgctctt cgccccatgc
      301 cgagcggcga cgggctgatc gtgcgcgtaa aaccgttctg cggcgcgttg ggtctcgatc
      361 aggcgcgcgg cctggccgac ctcgccgacc gcctgggcaa ccgccatatc gacctgacgc
      421 ggcgcgccaa cctgcagctc cgcggtcttt cggacgaacg cctgcccgag cttcaggatg
      481 cgctgcgacg gctcgcgttg atcgatgtcg atgccgagtc agaagcgacg cgcaacgtca
      541 tggtcgcccc gctcgccggc ctcgaccctg ccgagtcgtt cgatgtccgc ccactcgccg
      601 cggcgctgga gcgcgcgctg actgccgaca ggggcctgca ggcgctgccg gcaaagtttg
      661 gcctgctggt cgatggcggt ggcaagatct cgatcgcggg cgaacgcgcg gacatttgcc
      721 tcgcggtgac cgagaaaggc gtcgcattcg gactcgacac accgcggggt acgacgtggc
      781 ttgggtccgt tgcgcccgag cgagccgcgg agacggcaat tgcggcaatg catgcttttc
      841 tcgctgtctc accgggcggt cgcctgcgca cactcgccga agtcgatgcc gagagggtgc
      901 ggtccagcgt tcagccgttc ctatcgccgc ttaaaaccgt tccgcgcgcg aaggggcggc
      961 gcttgggcct gctggaggtc gctgtcggca tcgctgcgcc ttttggccgg ctagaggcgc
     1021 cgcagctccg ccgcctcgcc gcgctggcgg ccgagacagg cgcgacggat atccggctct
     1081 cgccctggcg caccgtctat atcggcgcgc gacatcgggc ggcggcgctt ttggatggtg
     1141 cccgtgaggc cggcctgatc gtcgacgata acgatgcgat attgcggatc gaggcctgtc
     1201 ccggcgcgcc cgattgcagg tcgagcagtg tcgacacgcg cggcgatgcg cggcggctgg
     1261 cggcgctggc cggcgagcgc ggctaccgag gcagcatcca tgtctcgggc tgcgccaagc
     1321 gctgcgcgcg ttccgcgccc tccgatctgt tgctgatcgg cgaggatggt ctctaccggc
     1381 tgggacagcg cctggtcggc cagcaggact ttccgacctt attcgaggca gcgaccgatg
     1441 gctgagccgc gcgcctatat ccgcgacggg gcggaaatct atcgccggtc cttcgccatc
     1501 atccgggccg aatcggacct cgctcgcttc acggccgcgg aggagcgggt ggccgtgcgc
     1561 atcatccatg cctgcggcat gaccgagatc gcgcgcgaca tcgtgatgtc gccgggcttc
     1621 gccgagcgcg cccggatggc gctgctggag ggcgcgccgg tcctttgcga ttctaaaatg
     1681 gtcgccaacg ggatcacgcg cgcacgcttg ccgaaatcca acccgatcgt ctgcaccatc
     1741 gacgatcccg ccgtgcccgg gctggcgcag ggtctcgcca acacgcgcac ggccgcggcg
     1801 atggatctgt ggcgggaccg gctggacggc gcggtggttg ccatcggcaa tgcgccgacg
     1861 gcgctgtacc gcctgctcga gatgctcgat gccggcgccc ccgctccagc ggtggtgatc
     1921 ggcctgccgg tgggctttgt tggcgcggcg gaatccaagg aggcgctggc cgccgacgga
     1981 cgcgtgccgt tcctgatcgt gcgcggccga ttgggcggca gcgccatggc agttgcagcg
     2041 gtcaatgcgc tggcgagcga gcaggaatga cgacgctcga tacattggcg gggaacgcga
     2101 cggcgggcac gctctacggc atcggcgtgg ggccgggcga tgtgcgctat ctcaccttgc
     2161 gcgccgccgg cctggtgcgc gccgtcgatg ttctagccta cttcgccaag aagggcctgc
     2221 cgggcaatgc gcgccgcatc gtggcgccct tgatcgtcga gggtcggacc gaacggcggc
     2281 tggaatatcc cgtgaccgac gagatgccgg cggaaagtgc cgagtatcag cttaggatca
     2341 gcgccttcta ccgcgcgacg gccgacgcct tggcaagtct cctgcggcaa ggaaaatcgg
     2401 tcgggctgct ggccgagggc gatccgttct tctacggctc cttcatgcat atgtggcgca
     2461 ggctcgcgcc cgatttcccg gtcgaggtgg tgcccggcgt caccggcatg tcgggctgct
     2521 ggacgcgcgc caacctgccg atcacctggg gcaacgacac gctggccgtg ctgcccggca
     2581 cgttggacga gggccggctc gtcgagcgcc tgcgtctcac cgatgcggcg gtgatcatga
     2641 aggtcggccg caatctcggc aaagtgcgcc gcgccgtcga ggccgccggc ctgctgtcgc
     2701 gcgcggtcta tgtcgagcgc ggcaccatgc aggacgagcg catcgtgccg ctcgccgact
     2761 gttgccagcc gacgggggcc tatttcggca tggtgctgat cccgggcgaa gggaggcggc
     2821 tgtgaacggc tcgctggtcg tcgtcggcac cggaccgggc aaggccgcgc tgatgactgg
     2881 cgcgacgcaa acggcactcg cccgcgctac cgacctggtg ggctacggtc cctatctcga
     2941 ccgtgttcct cgacgccatc accagcgcct ccacgcctcg gacaaccggg ccgagctgga
     3001 gcgcgcgcgt cttgcgctgt cgcttgccac cgaaggccgg cacgtcgtcg tggtgtcggg
     3061 cggcgatccc ggcgtgttcg ccatggcctc ggcggtgttc gaggcggtcg aggcgggcga
     3121 tccggcgtgg cgggagctcg atatcagggt cgagcccggc gtcacggcga tgctggccgc
     3181 cgccgccgaa gtgggtgcgc cgctgggcgg cgatttctgc gccatctcgc tctccgacaa
     3241 cctgaaagcc tggagcacga tcgagcggcg gctgacgttg gccgccgaag ccgacttcgt
     3301 gatcgcgctc tacaatcccg cgtccaaggc gcggccgcac cagttgggcc aggcgttcga
     3361 gctgctgaag aagatcaagg cggccgccac gcccgtccta ttcgtgcgtg ccgccggcac
     3421 cgccgatgcc gaagcggtca cgaccacgct cggcaccgcc gatccgtcac gcgccgacat
     3481 gcgcaccctg gtcatcatcg gcgccagcac gacacgaagg gtcggccgct gggtctacac
     3541 gccgcgcggc gagcggggaa cgccatgagc cagccacgtc actgcctcct cggcgctcgt
     3601 cacgacatga ccggcgggtt tgtccggccg tgcgatcatg atcaccggca ggccaagcgc
     3661 gcgcgcggct tcgatcttgg ggtaggtggc gctgccgccg gaattcttgg acacgacaac
     3721 gtcgatcttc tcgtcctgca gaagccgtcg ctcggcgtcg cggtcgaacg gtccgcgctg
     3781 ccgcaggaga acgagctcgg gcggcaagct cgcctgctgc ggcagctcga tgaggcgggc
     3841 gatgtagtgg tgctgcggag ccgcggcgaa gaggtgcaac tcctgccggc caagggtcag
     3901 gaacacgcgc cgcggcgcct tgccgagcgc aacggccgcg gcgtcggcgg tgggaaccac
     3961 tttccagaca tcgtccggct gcgccgtcca cgccggccgc accaacgagg cgagcggaac
     4021 attcgcccgg gcgcaggcgg caacggcatt ggcggaaatc tgcgcggcat agggatgcgt
     4081 ggcatcgatc accgcctcga tgttctgcgc gcgcaggaaa tcggccagcc catcggcgcc
     4141 gccgaaaccg ccgacgcgtg tcatgattgg ctgtggcctc ggcgcagtgg tgcggccggc
     4201 cagcgacagc gtcgcctcga agcgcgaatc gccggcgaga agtcgggcca agttggaggc
     4261 ttcggtggtg ccgccgagaa tgaggacgcg cattgcagga tcggccgatg acgaacgagc
     4321 ggccaacctg cacggcggtg cgctggctgt ccattgtcgg catcggcgag gacggcgtgg
     4381 caggcatctc gccgatagcg cagaagctga tcgcctcggc tgagctggtg gtgggcggca
     4441 agcgccatct tggcctggcc gacgggctga tccgcggcca ccggctcgcc tggccgaacc
     4501 cgatcggcgc ggcgctgccg gagatcgaga agcatcgcgg tcggccggtc gtcgtgctgg
     4561 cgagcggcga tcccttccac tacggcgtcg gcgatctgct gctgcgttcg atcccggccg
     4621 cggagacgct ttgcctgccg caatcctcgt ccttcagcct ggccgcctcg cggctcggct
     4681 ggtcgctgca ggatgtggcg ctggtgagcc tgcacggccg cgcgctggag ggcgtcgtgc
     4741 gccacctgca gccgggcgcg cgcatcctgg cgctgtcgtg ggacggcgag acgcccgcca
     4801 ggctcgccaa gcttttggtc gagcgtggca tgggcagctc ctcgctcacc gtgctggaag
     4861 ccatgggcgg accgcgcgag cgcgtgcgcc gcacgacggc ggcaggcttc gatctcgacg
     4921 atgtggcgcc gctcaatacc atcgcgctgg aagtcgctgc atcggacggc gcggtcgtgc
     4981 tgggcttggc gcccggcctt gacgattcgc tgttcgagca tgacggccag ctcaccaagc
     5041 gcgaggtccg cgccgtcacg ctctcggccc tggcgccgcg ccagggtgag cttttatggg
     5101 atgtcgggct gggcgcaggc tcgattgcca tcgaatggct gctgcgccat ccctcgctca
     5161 aggcgatcgg catcgaggcg gagcccgagc gcgctgcacg cgcggcacgc aacgccgcct
     5221 ctctcggcac gcctgacctc gagatcgtgc agaagcgcgc gcccaaggca ttcgatggcc
     5281 tgccgccgcc cgacgccgtg ttcatcggcg gcggactttc cgatccccgc ctgttcgaag
     5341 ccgcctggtc ggccttgaag tccggcggcc gcctggtcgc caatgccgtg tcgctgcagt
     5401 ccgaagcgcg gttgatcgag tacttccagc gccatggcgg cgagcttgtg cgcctcgacg
     5461 tcgcgaaagc cggcaaggct ggaaccggcg gcgtgttcgt gtggcgaccg gccgcgccga
     5521 tcattcagtg gcgtgcgagg aagccatgat cgtggccggt gtgggatgtc ggcgcggcac
     5581 gtcggccgac gaaatcgagc gcgtggtgcg cttggccttg ggcctgttcg aactgccggc
     5641 ggaacggctc gaggcgattg cgacggaatc ggagaaggcg accgaacccg gctttcccga
     5701 ggtggcgcgg cggttgtctg tcccgctcgt ggcctgcacg gtggccgatc tcgaccgcgt
     5761 ggcggggcgg gttcttacgg cctccaagct ggtgctcgag accaaaggcc tgccgtcgat
     5821 cgccgaggcc tcggcgctgg tcgtggccgg ccgcaacggc cgtctgctcg gcacgcgggt
     5881 cgccaccgag cgcgcgacct gcgccatcgc cacgggagag ggccgatgac ggtgcacttc
     5941 atcggcgccg ggccgggtgc gcccgacctc atcaccgtgc gcggctgcga gctgatcggt
     6001 cgttgtcccg tctgtctcta tgccggctcg ctggtgccca aggcgttgct cgatcattgc
     6061 ccaccgggcg cgcgcatcgt cgataccgca ccgatgtcgc tcgacgagat catcgcggaa
     6121 tgtcggcgcg ccacggacga aggccatgac gtggcgcgcc tgcactccgg tgacctttcg
     6181 gtctggagcg cgcttggcga gcagctgcgc cgcctcgacg aggttggcat cgcctacacc
     6241 atcacgcccg gcgtgccggc ctttgccgcc gccgccgccg ccctcggcca ggaactcacg
     6301 ctgcccgaac tggcgcagtc ggtggtgctg acccgcacct cgggccgtgc ctcggcgatg
     6361 ccgccgggcg agacactcga agcgtttgcc gcgaccggcg ccacgctcgc cgtgcatctg
     6421 tcgatccatg ccatcgacaa ggtcgtggcc tcgctcctgc cattctacgg cgccgactgt
     6481 ccggtcgccg tcgtctatcg cgcgagctgg cccgacgagc gcgtgattcg cgccacgctc
     6541 ggcaccatcg cgagcgaagt gaccaaaaat ccgatcgagc gcacggcatt gatcctggtc
     6601 ggcaaagtct tgggcgcgcg cgatttccgc aacagcgcgc tttacgacgc ggcctaccag
     6661 cggcgctttc gcggcagggc ccaatgagcg ggctagcgat ccccgacaat tttcccgagc
     6721 tgcccgactt cccgcccggc gaggtatggc tggccggcgc cggccccggc gatccgcggc
     6781 tcttgaccgt gctggcgctg cacgccttgg cgaccgccga cgacgtcgtg cacgatgcgc
     6841 tggtcgatgc ccgcgtgctg cggctggccc gcaagggcgc cgaattgatc ccggccggca
     6901 agcgcggcgg ccggccgtcg ccggaccagc gcgatatcaa cgaggtgctg atcgagcgcg
     6961 cccgcctcgg ccggcgggtc ctgcgcctta agggcggcga tccgttcgtg ttcggccgcg
     7021 gctgggagga ggcctcggcg ctgaccgcgg ccggcgtgcg ctttcgcatc attccgggcc
     7081 tgacctcggg cctggcggcg gcggcgctcg cgggcattcc cgcgacctcg cgcgacacca
     7141 accatgccgt ggtgctggcg gcgggccacc gcgccgagga tggcaggtcg gctgccgact
     7201 gggcggcgtt ggccaagctg ggacagccgc tcatcctcta catgccgatg gcgcagttgg
     7261 cggagatagc ggcttcgctg gagcagggcg gcctgtcggc cgacacgccc gccaccctca
     7321 tccaggcggc gacaacggcc ggggagcggg tgatcgaaag ccggttgggc tcgcttgccg
     7381 ccgatgcggc caagcacgcc attggttcgc cttccatcgt cgtgatcggc gccatcgccg
     7441 acctgcgccg gcagctcctg tcgtcgctgg tgccgt
//
LOCUS       DASWGA010000248         2198 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1926855, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000248 DASWGA010000000
VERSION     DASWGA010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1926855"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..373)
                     /locus_tag="VF991_06020"
     CDS             complement(<1..373)
                     /locus_tag="VF991_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9556031.1"
                     /translation="MTSTPQFIAEAAGRVPVAASSDLVVVGGGPAGIAAALAGARNGL
                     SVTLLERYPYLGGLASGGMVLVLDDMCNGQEIAVRGLCADLIARLERLGLAVTPPEAD
                     RRSDAAMWRKWSRWGVFDFTSH"
     gene            complement(402..1247)
                     /locus_tag="VF991_06025"
     CDS             complement(402..1247)
                     /locus_tag="VF991_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556032.1"
                     /translation="MANHAEPVTMATAFVEDAEAQARFVARRRYLAWRGRLLPVGAVI
                     VFLLLWWQAVEIFDIKPFIAPSPVAVAKVLYDRFDMLMTNLLPTAIEAISGFALGNLA
                     AISLATAFVYRKTMEEALFPIAVMVNTIPVVAKAPILVLLLGNGMEPKIAIAAIICFF
                     PTLVNMTRGLRDVRAEQLELMRILSATPSEVFLRIRVPNALPYLFSALKIAASTAVIG
                     AIVGEWIGSTKGIGALIIQSTYNFDSPLLYATIVVGSTFSALFFGVISLAEKRLLRWN
                     VAHNA"
     gene            complement(1247..2053)
                     /locus_tag="VF991_06030"
     CDS             complement(1247..2053)
                     /locus_tag="VF991_06030"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556033.1"
                     /translation="MAVALARRDPAPAASADAVVCERVTVRFTTERGTVTALENIDLS
                     IPRGSFLTLLGPSGCGKSTLLRVMADLIEPTSGRVAVLGDLPAIARHNREIGFVFQDP
                     ALLPWRSVLENVTLPLEVGGGRALPGARSPQDLLGLVGLTGWETAYPHELSGGMRQRV
                     AIARALVSGPRLLLMDEPFGALDEITRDRLNEELLQVWESTGTTIVFVTHSIYEAAFL
                     GQKVLLLAARPGRVRELVPVALPTPRRLAMRETPEFVALAGHLRRVLETC"
BASE COUNT          382 a          732 c          776 g          308 t
ORIGIN      
        1 gatgcgaggt gaaatcgaac acgccccaac gcgaccattt gcgccacatc gcggcatcgg
       61 aacggcgatc ggcctcgggg ggagtcaccg ccaggccgag ccgctccagg cgcgcgatca
      121 ggtcggcgca gaggccgcgc acggcgattt cctggccgtt gcacatgtcg tcgagcacca
      181 gcaccatgcc gccagacgcg agcccgccga gatagggata acgctcgagc agcgtgacgc
      241 tcagcccatt gcgtgcgccg gccagcgccg cggcgatgcc ggccgggccg ccacccacga
      301 cgacgaggtc ggacgatgcc gcgacgggca cgcggcccgc ggcttcggcg atgaattggg
      361 gagttgaggt catgacgcct cctttgccga aatgaagggg atcaggcgtt gtgcgccacg
      421 ttccagcgca gcaggcgctt ctcggcgagc gagatcacgc cgaagaacag cgccgagaag
      481 gtcgagccga cgacgatggt ggcgtagagc agcggcgaat cgaagttgta ggtcgactgg
      541 atgatcagcg cgccgatgcc tttggtcgag ccgatccatt cgccgacgat ggcgccgatc
      601 accgccgtgg acgcggcgat cttgagcgcc gagaacaggt agggcaacgc attgggcacg
      661 cggatgcgca ggaacacctc gctgggcgtc gccgacagga tgcgcatcag ctcgagctgc
      721 tcggcgcgca cgtcgcgcag gccgcgggtc atgttcacca gggtcgggaa gaagcagatg
      781 atggcggcga tggcgatctt gggctccatg ccgttgccca gcagtagcac caggatcggc
      841 gccttggcga cgaccgggat ggtgttgacc atcacggcga tgggaaacag cgcctcttcc
      901 atggtcttgc ggtagacgaa cgccgtggcg aggctgatcg ccgccaggtt gcccagcgcg
      961 aagcccgaaa tcgcctcgat cgccgtcggc agcagattgg tcatcagcat gtcgaagcgg
     1021 tcgtagagaa ctttcgccac cgccaccggc gagggcgcga tgaagggttt tatgtcgaag
     1081 atctcgaccg cctgccacca cagcagcagg aacacgatca cggcgccgac cggcagcagg
     1141 cggccgcgcc aggcgagata gcggcggcgg gcgacgaagc gcgcctgggc ctcggcatcc
     1201 tcgacgaagg ccgtggccat ggtcacgggt tcggcgtggt tggccatcag caggtctcca
     1261 gcacgcggcg gagatggccg gccagcgcga cgaactccgg cgtctcgcgc atggccagcc
     1321 ggcgcggcgt cggcaacgct accggcacca gctcgcgcac ccggcccggc cgcgccgcca
     1381 gcagcagcac cttctggccg aggaaggccg cctcgtagat cgagtgggtg acgaacacga
     1441 tcgtggtgcc ggtcgattcc cagacctgca gcaactcctc gttcaagcgg tcgcgcgtga
     1501 tctcgtcgag ggcgccgaac ggttcgtcca tcagcagcag tcgcgggccg gaaaccaggg
     1561 cgcgggcgat cgccacgcgc tggcgcatgc cgcccgagag ctcgtgcgga taggcggtct
     1621 cccagccggt gaggccgacc agacccagca ggtcctgcgg cgagcgcgca ccgggcagcg
     1681 ccctgccgcc gccgacctcg agcggcagcg tgacgttttc cagcacgctg cgccacggca
     1741 gcagggccgg gtcctggaac acgaagccga tctcgcgatt gtgccgggcg atcgccggca
     1801 ggtcgcccag caccgcgacc cgcccgctgg tgggctcgat cagatcggcc atcacccgca
     1861 gcagcgtcga cttcccgcag cccgagggcc cgagcaaggt caggaagctg ccgcgcggga
     1921 tcgacaagtc gatgttctcg agagccgtca cggtgccgcg ctcggtggtg aagcgcacag
     1981 tgacgcgctc gcatacaacg gcgtcggcac tggcagccgg tgcgggatcc ctgcgcgcta
     2041 gcgcgacggc catcgcccgg ctcagccgac cttggcgcgc acgcccttgg tggcgtcgag
     2101 gatcttggtg gtcatgatgt cctcgagctt gggcgcgccg gcggtgaact gcttcagctc
     2161 gtcgtacagc ttgatctgct cctgccagac tgccggat
//
LOCUS       DASWGA010000249         4176 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1674477, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000249 DASWGA010000000
VERSION     DASWGA010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4176
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1674477"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..445
                     /gene="ruvC"
                     /locus_tag="VF991_06035"
     CDS             2..445
                     /gene="ruvC"
                     /locus_tag="VF991_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018858852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEX9556034.1"
                     /translation="MIDVDGNRLRHVAHGIVRVAATGSLADRLRQLFDGVAAIVEAQR
                     PIEAAVEETFVNINPGSTLKLGQARGVVMLAPARAGLPVFEYAANLVKKSVTGVGHAD
                     KRQIAMMVGRLLPGVVAESDAADALAVAICHAHHRATAKRVEAAL"
     gene            442..1047
                     /gene="ruvA"
                     /locus_tag="VF991_06040"
     CDS             442..1047
                     /gene="ruvA"
                     /locus_tag="VF991_06040"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEX9556035.1"
                     /translation="MIAKLKGVVDQVDADSAIVDVGGVGYLVSASARTLRNLSAGDVV
                     TVLVETIVREDAIALYGFLETAERDWFRILTTVQGVGARVALSILSTLSPDEIARAIA
                     AQDRATLSRPAGVGAKLAARLATELKDKAAAFGVAPTSKIAEMASMPAGSINEDAVSA
                     LVNLGYKRVEAFGAVARVTQRLGGEAKLDAVIRAGLQELAR"
     gene            1044..2099
                     /gene="ruvB"
                     /locus_tag="VF991_06045"
     CDS             1044..2099
                     /gene="ruvB"
                     /locus_tag="VF991_06045"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEX9556036.1"
                     /translation="MNDADRLVAPKRAEEDAAELVMRPQTLDDFVGQKQVRENLKIFI
                     AAAKSRGEALDHVLFHGPPGLGKTTLAQIVAREMGVGFRATSGPVIQKAGDLAAQLTN
                     LQPRDVLFIDEIHRLNPAIEEILYPAMEDFQLDLMIGEGPAARSVRIELPPFTLVGAT
                     TRSGLMTRPLRERFGIPLRLVFYEPAELETIVHRAARVLQMGMAKDGGAEIAKRSRGT
                     PRVANRLLRRVRDFAAVGGNQVIDSRVADEALTRLEVDGRGLDAMDRRYLACIAENYG
                     GGPVGVETLAAALSEQRDVIEDVIEPYLMQLGLLMRTPRGRLLSEGGYRHLGVAMPKE
                     QQRQLDLLASGGPAEEA"
     gene            2096..2578
                     /gene="ybgC"
                     /locus_tag="VF991_06050"
     CDS             2096..2578
                     /gene="ybgC"
                     /locus_tag="VF991_06050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HEX9556037.1"
                     /translation="MSAPTSGRLADGVHVLPLRIYYEDTDAAGIVYYANWLRFLERGR
                     TELLRLLGQEHSGLRDERGVNWVVRRCTIDYLKPARLDETIEVVTSCGELRGASLDMI
                     QQARRGDEILLRAALVVACMGQGGRPVRLPPHLRTALARVTPNSVTSGASPRSRHIRV
                     "
     gene            2602..3336
                     /gene="tolQ"
                     /locus_tag="VF991_06055"
     CDS             2602..3336
                     /gene="tolQ"
                     /locus_tag="VF991_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HEX9556038.1"
                     /translation="MDAFAQVAGTPLGGSTGPIDMSVYGLFMQADWVVKAVMIALLLA
                     SFWSWAIIFEKMLRLRALKRSAQLFEDTFWSGVSLEDLYDRVGTKPDDPMSSIFSAAM
                     REWRRSVSKGLAASATARSALRQRIEQVMSVTIQREMEAIEKRLGFLATVGANATFVG
                     LFGTVWGIMNSFGHIAQSKNTSLAVVAPGISEALFATAIGLVAAIPAAGAYNILSGQV
                     TRYAQQLEAFAGEFITILSRQLEEQV"
     gene            3336..3872
                     /locus_tag="VF991_06060"
     CDS             3336..3872
                     /locus_tag="VF991_06060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HEX9556039.1"
                     /translation="MAGVIPAAGAGSSGGRFRRRRFTPIADINVTPLVDVMLVLLIIF
                     MITAPLLQVGVPVDLPKTSAQQVGGKDEPLVVSVNAKGEVFLGETPYEIAGLATKLKA
                     VHDEKPDQRVFMRGDKSVDYGKMMEVMGVVIDSGFRQLGLLGEQAQQLGKGVGTVTPA
                     PAPTPRGPQQQQQPAPRR"
     gene            3895..>4176
                     /locus_tag="VF991_06065"
     CDS             3895..>4176
                     /locus_tag="VF991_06065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556040.1"
                     /translation="MAERSPESLEMRTPAIVSAMLHVFVVAAALLNLDFFNRPPQLDP
                     EPVMVEFEVIDKKAAAPTAGNPPPQPTDVPIAAEATKAPPPKSADPPPAP"
BASE COUNT          659 a         1435 c         1441 g          641 t
ORIGIN      
        1 cgtgatcgac gtcgacggca accggctgcg ccacgtcgcg cacggcattg tccgggtcgc
       61 cgctaccggc agcctggccg accggctgcg gcaactgttc gacggcgtcg ccgccatcgt
      121 cgaggcgcaa cggccgatcg aggcggcggt cgaggagacc ttcgtgaaca tcaatcccgg
      181 ctcgacgctg aagctcggcc aggcgcgcgg cgtcgtcatg ctggcgccgg cgcgggccgg
      241 cctgccggtg ttcgagtatg ccgccaacct ggtgaagaag tcggtgaccg gcgtgggcca
      301 cgccgacaag cgccagatcg ccatgatggt cggccgcctg ctgcccggtg tcgtggccga
      361 gagcgacgcc gccgatgcgc tggcggtcgc gatctgccat gcccatcatc gcgccactgc
      421 caaacgggtg gaggcggcac tttgatcgcc aagctgaaag gtgtcgtgga ccaggtcgac
      481 gccgacagcg ccatcgtcga tgtcggcggc gtcggttatc tggtttcggc gtcggcccga
      541 accttgcgca atttgtcggc gggcgatgtc gtcacggtgc tggtcgagac catcgtgcgc
      601 gaggacgcga tcgccctcta cggctttctc gaaaccgccg aacgcgactg gttccgcatc
      661 ctgacgacgg tgcagggcgt cggcgccagg gtggcgctgt cgatcctttc caccctgtcg
      721 cccgacgaga tcgcgcgcgc catcgccgcc caggatcgcg ccacgctcag ccgtccggcc
      781 ggcgtcggcg ccaagctcgc cgcccggctc gcgacagagc tcaaggacaa ggctgcggcc
      841 ttcggcgtcg cgccaacaag caagatcgcc gagatggcct cgatgccggc aggttcaatc
      901 aacgaggacg cagtctccgc cctggtcaat ctcggctaca agcgcgtcga ggcgttcggt
      961 gcggtggcgc gcgtgaccca gcgcctgggc ggcgaggcca agctcgatgc ggtgatccgc
     1021 gccggcctgc aggagctggc gcgatgaacg acgccgatcg gctggtggct cccaagcgcg
     1081 ccgaggagga tgcggccgaa ctggtgatgc gcccgcagac gctcgacgac ttcgtcggcc
     1141 agaagcaggt ccgcgagaac ctgaagatct tcatcgccgc cgccaaatcg cgcggcgagg
     1201 cgctcgacca tgtgctgttc cacgggccgc ccgggctcgg caagacgacg ctggcccaga
     1261 tcgtggcgcg cgagatgggc gtgggctttc gcgcgacctc ggggccggtg atccagaagg
     1321 cgggcgacct tgccgctcag ctgaccaatc tgcagccgcg cgatgtgctg ttcatcgacg
     1381 agatccatcg cctcaatccg gcgattgagg aaatcctcta tccggcgatg gaggatttcc
     1441 agctcgacct catgatcggc gagggaccgg ccgcccgctc ggtgcgcatc gagctgccgc
     1501 ctttcaccct ggtcggcgcc accacccgat ccggcctgat gacgcgcccg ctgcgcgagc
     1561 gcttcggcat tccgctgcgc ctggtgttct atgagccggc cgagctcgag acgatcgtcc
     1621 atcgcgccgc gcgcgtcctc cagatgggga tggccaagga cggcggcgcc gagatcgcca
     1681 agcgctcgcg cggcacgccg cgcgtcgcca accgcctgct gcgccgcgtc cgcgatttcg
     1741 cggcggtcgg cggcaatcag gtgatcgact cgcgcgtcgc cgatgaggcc ttgacccggc
     1801 tggaggtcga cgggcgcggg ctcgacgcca tggaccgccg ctacctcgcc tgcatcgccg
     1861 agaactacgg cggcgggccg gtcggcgtcg agacgctggc ggccgcgctc tccgagcagc
     1921 gcgacgtcat cgaggacgtg atcgagccct acctgatgca gctcggcctc ctgatgcgca
     1981 cgccgcgcgg gcggctgctg tcggaaggcg gctaccgtca cctcggcgtg gcgatgccca
     2041 aggagcagca gcgccagctc gacctgctgg caagcggcgg tccggcggag gaggcgtgag
     2101 cgcgccgacg tccggtcggc ttgccgacgg cgtccatgtg ctgccgctgc ggatctatta
     2161 cgaggacacc gacgcggcgg gcatcgtcta ctacgccaac tggctgcgct tcctcgagcg
     2221 cggccgcacc gagctcctgc gtctgctcgg ccaggagcac agcgggttgc gcgacgagcg
     2281 cggcgtcaac tgggtcgtcc gacgctgcac catcgactat ctgaagccgg cgcggctcga
     2341 cgagacgatc gaagttgtca ccagctgcgg cgaactgcgc ggcgcgtcgc tggacatgat
     2401 ccagcaggct cgccggggcg acgagatttt gctccgcgcc gcgctcgtcg tcgcctgcat
     2461 ggggcaaggc ggccggccgg tgcgactgcc gccgcacctg cggacggcgt tggcccgggt
     2521 cacgccgaac agcgtcacgt caggcgcctc gccccgctca cgccatattc gagtataaac
     2581 atctgaacaa cggagattcc aatggacgcg tttgcgcagg tcgccggaac ccccctcggc
     2641 ggcagcacgg gaccgatcga catgtcggtc tacggcctgt tcatgcaggc cgactgggtc
     2701 gtcaaggccg tgatgatcgc cctcttgctg gcatcgttct ggtcgtgggc gatcatcttc
     2761 gaaaagatgc tgcggctccg cgcgctgaag cgcagcgcgc agttgttcga ggacacgttc
     2821 tggtcgggcg tctcgctcga ggacctctac gatcgggtgg gaaccaagcc ggatgatccg
     2881 atgtcgagca tcttctcggc cgccatgcgc gaatggcgcc gctcggtgtc gaagggcctg
     2941 gcggccagcg ccacggcgcg gtcggcgctt cgccagcgca tcgagcaggt catgagcgtc
     3001 acgatccagc gcgagatgga ggcgatcgaa aagcggctgg gcttcctggc gacggtcggc
     3061 gccaatgcca ccttcgtcgg gctgttcggc acggtgtggg gcatcatgaa cagcttcggg
     3121 cacatcgcgc agtcgaagaa cacctcgctg gcagtggtgg cgccgggcat ctcggaggcg
     3181 ctgttcgcca ccgcgatcgg cctggtcgcg gccattcccg cggccggcgc ctacaacatc
     3241 ctcagcggcc aggtcacgcg ctacgcccag cagctcgaag ccttcgccgg cgaattcatc
     3301 accatcctgt cgcgtcaact cgaggagcag gtctgatggc aggcgttatc cccgcagccg
     3361 gtgccggcag ctccggcggc aggttcaggc ggcggcgctt cacgccgatc gccgacatca
     3421 acgtcacgcc gctggtcgac gtcatgctgg tgctgctgat catcttcatg atcaccgcgc
     3481 ccctgttgca ggtcggcgtg ccggtcgatc tgcccaagac gagcgcccag caggtcggcg
     3541 gcaaggacga gccgctggtc gtgtcggtca acgccaaggg cgaggtcttc ctcggcgaaa
     3601 cgccgtacga gatcgccggc ctcgccacca agctcaaggc cgtgcacgac gagaagcccg
     3661 accagcgcgt gttcatgcgc ggcgacaaga gcgtcgacta tggaaagatg atggaagtga
     3721 tgggtgtggt gatcgacagc ggctttcgcc agctcggctt gctcggcgag caggcccagc
     3781 agctcggcaa gggcgtcggt accgtgacgc cggcgccggc gccaacgccc cgcggaccac
     3841 agcaacagca gcagccggcg ccgcgtcggt agaagaccgg aggcgaagcg atcgatggcc
     3901 gaacgctccc ccgaaagcct cgagatgcgc acaccggcca tcgtgtcggc gatgctgcac
     3961 gtcttcgtgg tggcggcggc gctgctcaat ctcgatttct tcaaccgccc gccgcagctc
     4021 gaccccgaac cggtgatggt cgagttcgag gtgatcgaca agaaggcggc cgcgcccacg
     4081 gccggcaatc cgccgccaca gcccacggac gtgccgatcg cggcggaggc gaccaaggcg
     4141 ccgccgccca aatcagccga tccgccgccg gcgccc
//
LOCUS       DASWGA010000250         4430 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1674500, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000250 DASWGA010000000
VERSION     DASWGA010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4430
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1674500"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VF991_06070"
     CDS             complement(<1..303)
                     /locus_tag="VF991_06070"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9556041.1"
                     /translation="MQRRTLLASLAAGTLLTPTARAAAGFVTTRDNQRLAVIDRGAGK
                     PVVLIHGWSLGSAIWTLQTDWLVSQGLRVVAYDRRGHAGSDKPADGYDFDSLAADLA"
     gene            418..789
                     /locus_tag="VF991_06075"
     CDS             418..789
                     /locus_tag="VF991_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9556042.1"
                     /translation="MDTLSQTFSALADPTRRAILARLATGAATVGELAQPFDMSLPAV
                     SRHLRVLTDAGLIERHTEAQWRRCALRGEGLRGAADWIEFYRRFWEQQFNKLDAFLKR
                     TAPPPDPKPKPKKGKRYGRRT"
     gene            773..1234
                     /locus_tag="VF991_06080"
     CDS             773..1234
                     /locus_tag="VF991_06080"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9556043.1"
                     /translation="MVAVLDENVLRITRIFDATCERVFDAWTDGEQFGQWFGPHDVAT
                     VYCEIDARTGGTWRLLGRNAQRTFAVSGRYLEVKRPERLIFTFAWHDKGDHAQPREHE
                     TTVRIELRALGNKTEMTMTQGAFLDRTAVTNHNRGWSQSFEKLATLLGRTA"
     gene            1231..1917
                     /locus_tag="VF991_06085"
     CDS             1231..1917
                     /locus_tag="VF991_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007765864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 domain-containing protein"
                     /protein_id="HEX9556044.1"
                     /translation="MTQRIVSREEWLAARKAFLGKEKEFTRARDELSRERRELPWVKV
                     DKAYTFDAPEGRVTLSDLFGGKGQLLVYHFMFGPDWSEGCPSCSFWADNYNGVDVHLA
                     HRDTALVAISRAPLAKLEAYKKRMGWTFRWVSSLGSDFNFDYGASFNPGEERPLYNFG
                     TMKPFGEETPGISVFRRGEDGAIYHTYSTYTRGLDMLNGAYHLLDLTSKGRDEDPEHP
                     MSWVRRHDRY"
     gene            1943..2563
                     /locus_tag="VF991_06090"
     CDS             1943..2563
                     /locus_tag="VF991_06090"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9556045.1"
                     /translation="MAAIKIHGVPPSTFTRTVLLACHEKGIDHELVPTMPSEITALNP
                     FRKIPAITHGDLVLYESTAILRYFDRTLPGPKLWPEDSVGIARCDQWISAICDSLVNT
                     ALRYMASRYGFLPVPAEMRQQYLDKTAEVLPIFDRQLGCTRYLAGDTMTAADLFLAPL
                     LFYFPDIPELKAVADRAPNCARWARDMAGRPSVRATEPQQKPRLAA"
     gene            2577..3197
                     /locus_tag="VF991_06095"
     CDS             2577..3197
                     /locus_tag="VF991_06095"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9556046.1"
                     /translation="MATLQIYGVPPSPFTRAARLACHEKGVDYELVSTPPGGTAPKNP
                     LGKIPMMNHGDFTLFESQAIVRYVDHTFDGPPLWPKEAHAAALCDQWLSVVCDSMVQT
                     ALAGVIAPRFGILPGTEQSIQGALKRSERVVGIFDKHLADHRFLAGEQVTAADLFLVP
                     IFFYFPAIPELKALGEASPNCGRWVREMGARPSVQATDPQFRGLNR"
     gene            3194..3481
                     /locus_tag="VF991_06100"
     CDS             3194..3481
                     /locus_tag="VF991_06100"
                     /inference="COORDINATES: protein motif:HMM:NF016162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF427 domain-containing protein"
                     /protein_id="HEX9556047.1"
                     /translation="MTHKATWQGKTIAESDRIVEVGGYIYFPRDTVRMDLLKVTPKTA
                     SDLECPHGVQFYDVVDGDTKSARAAWSYEAPQPKMKPVDHWIGFWEDVAIQ"
     gene            complement(3552..4166)
                     /locus_tag="VF991_06105"
     CDS             complement(3552..4166)
                     /locus_tag="VF991_06105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556048.1"
                     /translation="MTIRSIKWAAGVSLFAAALAVATILPERQASAQVQSAQVQAVPR
                     SGIAFNNTVTERVTIETIDSEGRTVAFTRPDGQLVILPVADGVGNLASIQDGAPANVT
                     YNEVVTLLNLRQKGPGSKEERRESMNPKRNPTDIEAGRFTVTVVGVDLANNTVSVIDG
                     RGGVVRTYKANTAAKQDMLKKTKVGDVVIGLTTPLMVTAISPAP"
     gene            complement(4249..>4430)
                     /locus_tag="VF991_06110"
     CDS             complement(4249..>4430)
                     /locus_tag="VF991_06110"
                     /inference="COORDINATES: protein motif:HMM:NF019982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9556049.1"
                     /translation="APTLILWGERDAILPPSYAKKFAAGINGASRVETVAGAGHLAYL
                     DQPDAVARAVLAHFA"
BASE COUNT          776 a         1453 c         1472 g          729 t
ORIGIN      
        1 ggcgaggtcg gccgccaggc tgtcgaagtc atagccgtcc gccggcttgt cggagccggc
       61 atggccgcgc ctgtcatagg cgacgacgcg cagtccctgg gagacgagcc agtcggtctg
      121 cagggtccag atcgccgagc ccagcgacca gccgtggatc agcaccaccg gcttgccggc
      181 gccgcggtcg atgacggcca gccgttgatt gtcgcgtgtc gtcacgaagc cggcggcggc
      241 gcgggcggtt ggtgtcagca acgtgccggc ggcgagcgag gcgagcaggg tgcgtctttg
      301 catgaggtcc tccgtggctc tcgcacccag agatgcaccc cgcgccggag gcggtcgatg
      361 acatggcagg taatgacttg acggcggtcg gttttgtatt taacaagtat gttaaatatg
      421 gatacgctct cgcaaacctt ctcggcactc gccgacccga cccgccgcgc gatcctggct
      481 cggctcgcca caggcgcggc cacggtcggc gagctcgccc agccgttcga catgtcgttg
      541 ccggcggtgt cgcggcatct cagggtgctg accgacgccg gcctgatcga gcgccacacc
      601 gaggcgcaat ggcggcgctg cgcgctgcgc ggcgagggcc tgcgcggcgc cgccgactgg
      661 atagagttct atcgccggtt ctgggagcag caattcaaca agctcgatgc gttcctcaag
      721 cgcaccgcgc cgccgcctga tcccaagccc aaaccgaaga aaggaaaacg ttatggtcgc
      781 cgtacttgac gagaacgtgc ttcgcatcac gcgcatcttc gacgcgacgt gcgagcgagt
      841 gttcgacgcc tggaccgacg gcgagcagtt cggccagtgg ttcggcccgc acgacgtggc
      901 cacggtctat tgcgagatcg acgcgcggac cggcgggacc tggcggctgc tcgggcgcaa
      961 cgcccaacgc accttcgcgg tgtcgggcag gtacctcgag gtgaagcgtc ccgagcgcct
     1021 gatcttcacc ttcgcctggc acgacaaggg cgaccatgcc cagccgcgcg agcacgagac
     1081 gacggtgagg atcgagctgc gcgcgctcgg caacaagacc gagatgacga tgacgcaagg
     1141 cgccttcctc gaccgcaccg ctgtcaccaa tcacaaccgc ggctggagcc agtcgttcga
     1201 gaagctcgcc accttgctcg ggaggaccgc atgactcagc gcatcgtcag ccgcgaggaa
     1261 tggctcgccg cccgcaaggc ctttctcggc aaggagaagg agttcacgcg ggcccgagat
     1321 gagctgtcgc gcgagcgccg cgaactgccg tgggtcaagg tcgacaaggc ctacacgttc
     1381 gacgcgccgg agggtcgcgt cacgctcagc gacctgttcg gcggcaaggg gcagctcctg
     1441 gtctatcact tcatgttcgg gccggactgg agcgagggct gcccgagctg ctcgttctgg
     1501 gccgacaact acaacggcgt cgacgtgcat ctggcgcatc gcgacaccgc gctggtcgcc
     1561 atctcgcgcg cgccgctggc caagctcgag gcctacaaga aacgcatggg ctggacgttc
     1621 cgctgggtgt cgtcgctcgg cagcgacttc aacttcgact acggcgcgtc gttcaatccg
     1681 ggtgaggagc gaccgctcta caatttcggc acgatgaagc ccttcggcga ggagacgccg
     1741 gggatcagcg tgttccggcg cggcgaggat ggggcgatct atcacaccta ttcgacctac
     1801 acgcgcgggc tcgacatgct gaacggcgcc tatcacctgc tcgacctcac ctcgaagggc
     1861 cgcgacgagg atcccgagca tccgatgtcc tgggtgaggc ggcacgaccg ctactgattt
     1921 ttcgccaaga gaggagggga cgatggctgc gatcaagatc cacggcgtgc cgcccagcac
     1981 atttacccgc acggtgctgc tggcttgcca cgagaagggc atcgaccacg agctggtgcc
     2041 gaccatgccg agcgagatca cggcgctcaa tccgttccgc aagatcccgg cgatcacgca
     2101 tggcgatctc gtgctctacg aatcgacggc gatcctgcgc tacttcgatc gcacgctccc
     2161 cggcccgaaa ctgtggccgg aggattcggt cggcattgct agatgcgatc aatggatcag
     2221 cgccatctgc gattcgctgg tcaatacagc gctgcgctac atggcctcgc gctacggctt
     2281 tctgccggtg ccggccgaga tgcgccagca atatctcgac aagacggccg aggtgctgcc
     2341 gatcttcgac cgccagctcg ggtgcacgcg ctatctggcg ggcgacacca tgacggcagc
     2401 cgacctcttc ctggcgccgc tgctgttcta ctttccggac attcccgagc tcaaggcggt
     2461 cgccgaccga gcccccaatt gcgcgcgctg ggcgcgtgac atggccggcc ggccgagcgt
     2521 gagagcgacc gagccgcagc agaagccgcg actcgccgcc tgaaggagaa gacgccatgg
     2581 caaccctgca gatctacggc gtgccgccca gccccttcac ccgcgccgcc cggctggcct
     2641 gccatgagaa gggtgtcgac tacgagctgg tgtcgacacc gcccggcgga accgcgccta
     2701 aaaatcccct gggcaagatt ccgatgatga atcacggcga tttcacgctg ttcgaatcgc
     2761 aggcgatcgt ccgctacgtc gaccacacct tcgacggacc gccgctgtgg cccaaggagg
     2821 cgcacgcggc ggcgctgtgc gatcaatggc tgagcgtggt ctgcgattcg atggtccaga
     2881 ccgcgctggc cggcgtgatc gctccgcgct tcggcatcct tccgggcacc gagcagagca
     2941 tccagggggc gctcaagcgc agcgaaaggg tggtcggcat cttcgacaag catctggcgg
     3001 accatcgctt tctcgccggc gagcaggtca cggcggccga cctgttcctg gtgccgatct
     3061 ttttctattt ccccgcgatt ccggagttga aagcgctcgg cgaagcatca cctaattgcg
     3121 gacgctgggt gcgcgagatg ggcgcccgac cgtccgtcca ggcgacggac cctcagttca
     3181 ggggactcaa tcgatgactc ataaagcgac atggcagggc aaaacgatcg ccgaaagcga
     3241 ccgcatagtg gaagtcggcg gctacatcta cttcccgcgc gacaccgtcc gcatggacct
     3301 gctcaaggtc acgcccaaga cggcgagcga cctcgaatgt ccgcacggcg ttcagttcta
     3361 cgacgtcgtg gacggtgata cgaagagcgc gcgcgcggcg tggtcgtacg aggcgccgca
     3421 gcccaagatg aagccggtcg atcactggat cggcttctgg gaagacgtcg ccatccagta
     3481 gggcctgtcg tctcgcgcgg ggtcgtcccc gcgcgcgatg acagaaagac gcgatgcgct
     3541 tgcgcttgaa actacggcgc cggcgagatc gccgtcacca tcagcggcgt cgtgaggccg
     3601 atcacgacgt cgccgacctt ggtcttcttc agcatgtcct gcttggcggc ggtgttggcc
     3661 ttgtaggtgc ggacgacgcc gccgcggccg tcgatcaccg agacggtgtt gttggcgaga
     3721 tccacgccga ccaccgtcac cgtgaagcgg ccggcttcga tatcggtggg gttgcgtttg
     3781 gggttcatcg actcgcgacg ctcctccttg gaacccgggc ccttctggcg caggttcagg
     3841 agagtcacga cttcgttgta ggtgacgttg gccggcgcgc cgtcctggat ggaagcgaga
     3901 ttgccgacgc cgtcggcgac cggcaggatc acgagctggc cgtcgggccg ggtgaaggcc
     3961 acggtgcggc cctcggaatc aatcgtctcg atggtgaccc gttcggtgac cgtgttgttg
     4021 aatgctatgc ccgagcgcgg cacggcctgg acttgcgccg actgaacttg ggccgacgcc
     4081 tgccgctccg gcaggatcgt cgccaccgcc agcgccgccg caaacagcga aacgccggcg
     4141 gcccacttga tcgaacggat agtcatcggc ctgtccctcg caaaattcca acgcgccgga
     4201 caatagcgat ccgaagcggc gacgcaacct ccaagccggg gcaacgtatc aggcgaaatg
     4261 ggccaggacg gcgcgggcga ccgcatcggg ctggtcgaga taggcgagat ggccggcgcc
     4321 ggccacggtt tcgacccggc tcgcgccgtt gatgccggcg gcgaacttct tggcatagct
     4381 cggcggcagg atggcgtcgc gctcgcccca caggatcagc gtgggcgccg
//
LOCUS       DASWGA010000251         2691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1037231, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000251 DASWGA010000000
VERSION     DASWGA010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1037231"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..485)
                     /locus_tag="VF991_06115"
     CDS             complement(<1..485)
                     /locus_tag="VF991_06115"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9556050.1"
                     /translation="MVAIKAAEFAFPRMEAPDLDAMEEFLTHFGLVRAERTPDALYMR
                     GADGHHHLHAVHKGGTKFIGFAYHAASEDDLKRLAKLPGASGIETVNEPGGGKRVRLK
                     EPNGYQIEVVHGMQTVAPTKVERDPVNTGGDPLRRKGRLMRLSKSPTMLQRIGHGVLS
                     TP"
     gene            complement(677..>2691)
                     /locus_tag="VF991_06120"
     CDS             complement(677..>2691)
                     /locus_tag="VF991_06120"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9556051.1"
                     /translation="VRYVGDPVAMVIADTLAEAKDAAELVNIDYEAIPSVTSTADTVK
                     PGAPAVWDDCPDNISNFVERGNKAATDEVIKGAAKVIKRRYVITRVHAQYMEPRGTLG
                     TYDPGEDRMTLYADVQYPHRVRNMLAQNVFKVPESKMRVIAGDVGGGFGTKGWQYIEH
                     RLTLWAARKLLRPVKWTCERSEAVMADEHGRDNIGEIELALDKDNKFLALRLNMLANI
                     GAYVGSDRNLLSPFGMIGTVLGVYLIPKAYINVVGVLSNTNPTAPYRGAGRPEAIYLI
                     ERLIDDAARELGVDRIELRRKNMLAESALPYQSPVGPYYDCGQFEKCLDMAIELADVA
                     GYQARVEESRKRGRLRGLGIINAIEQAAGTAQPEYAEIRFNPSGTAALLMGTKNQGQG
                     HETMFKQILNERLGIDPNDVQFIDGDTDRVAFGMGTNGSRSTVLGGSALFLAAGKVID
                     KGKKLAGHLLEAGEQDIEFADGSFKVAGTDKSVSLKQVAMAAFNPTRWPKGFEGGLYE
                     NATFLGQRDTFPNGCHICEVEVDPETGDVTPDRYFVVDDVGTVMNPTGLKGQIHGGVA
                     QGIGQILCEQVVWDRQSGQLLTASFLDYAMPHAMMIPNMEVKSNPVPTKFNPLGAKGA
                     GEAGTVGAMPVVMNAIMDALAPLGVSDVDMPATAQNVWRAIQQAKK"
BASE COUNT          408 a          904 c          864 g          515 t
ORIGIN      
        1 ggcgtcgaca gcacgccatg tccgatgcgc tgcagcatcg tcggcgactt gctgagccgc
       61 atcaggcggc ccttgcgacg cagcggatcg ccgccggtat tgaccggatc gcgctcgacc
      121 ttggtcggcg ccacggtctg catgccgtgg acgacctcga tctgatagcc gttgggctcc
      181 ttcaggcgca cgcgcttgcc gccgcccggc tcgttcacgg tctcgatgcc ggacgcgccc
      241 ggcagcttgg cgaggcgctt gagatcgtcc tcgctcgcgg cgtgataggc gaagccgatg
      301 aacttggtgc cgcccttgtg gacggcgtgc aggtgatgat ggccgtccgc accgcgcatg
      361 tagagcgcgt cgggcgtgcg ctcggcgcgc accaggccga aatgggttaa aaactcctcc
      421 atcgcgtcga ggtccggcgc ctccatgcgc ggaaaagcga actctgcggc tttgattgca
      481 accatgactt cctccgggat tgaaactcat tccttcttac tgcagcgcgg acctccaggt
      541 ccgcatcttt cgtctttgct gggagcgcgc aactccagtt gcgcatcttt gcgtgttgcc
      601 aacacatgag cgccacggag tggcgcgctc ccagcgatga gcgggcctgg aggcccgcgg
      661 tccggcatga ttccccctac ttcttcgcct gctggatggc acgccacacg ttctgcgccg
      721 tcgccggcat gtccacatcc gacacgccaa gcggcgccag cgcgtccatg atggcgttca
      781 tgaccaccgg catcgctccc accgtgcccg cctcgccggc gcccttggca cccagcggat
      841 tgaacttggt cggtaccgga ttgctcttca cttccatgtt gggaatcatc atcgcgtgcg
      901 gcatcgcata atcgaggaag ctcgccgtca aaagctggcc gctctgcctg tcccacacca
      961 cctgctcgca caggatctgg ccgatgccct gggccacgcc accatggatc tggcctttca
     1021 gcccggtcgg gttcatcacc gtgccgacat cgtcgacgac gaaatagcgg tcgggcgtga
     1081 cgtcgccggt ctcgggatcg acctcgacct cgcagatgtg gcagccattg gggaaggtgt
     1141 ccctctggcc gaggaaggtc gcattctcat agagaccgcc ctcgaaaccc ttgggccagc
     1201 gcgtcgggtt gaaggcggcc atcgccacct gcttcaagga caccgatttg tcggtgccgg
     1261 cgaccttgaa gctgccgtcg gcgaactcga tgtcctgctc gcccgcctcg agcagatggc
     1321 cggcgagctt cttgcccttg tctatgacct tgccggcggc gaggaacagc gccgagccgc
     1381 ccagcaccgt cgagcgcgag ccgttggtgc ccatgccgaa ggccacgcgg tcggtgtcgc
     1441 cgtcgatgaa ctgcacgtcg ttgggatcga tgcccagccg ctcgttcagg atctgcttga
     1501 acatggtctc gtggccctgg ccctggttct tggtgcccat gagcagcgcg gcggtgccgc
     1561 tgggattgaa gcggatctcg gcatattccg gctgcgccgt gccggcggcc tgctcgatgg
     1621 cgttgatgat gccgaggccg cgcagcctgc cgcgcttcct cgactcctcg acgcgcgcct
     1681 ggtagccggc gacgtcggcg agctcgatcg ccatgtcgag gcacttctcg aactggccgc
     1741 aatcgtagta gggcccgacc gggctctgat agggcagcgc cgattccgcc agcatgttct
     1801 tgcggcgcag ctcgatgcga tcgacgccca gctcgcgcgc cgcgtcgtcg atcagccgtt
     1861 cgatgagata gatcgcctcc ggccgcccgg cgccgcgata gggcgccgtc gggttggtgt
     1921 tggagagcac gcccaccacg ttgatgtagg ccttggggat caggtagacg cccagcacgg
     1981 tgccgatcat gccgaacggc gacagcaggt tgcggtccga gccgacatag gcgccgatgt
     2041 tggccagcat gttgagccgc agcgccaaaa acttgttgtc cttgtcgagg gcaagctcga
     2101 tctcgccgat attgtcgcga ccgtgctcgt cggccatcac ggcttcgctg cgctcacagg
     2161 tccatttcac cggccgcagc agcttgcgcg ccgcccacag ggtgagacga tgctcgatat
     2221 actgccagcc cttggtgccg aagccgccgc cgacatcgcc cgcgatcacc cgcatcttgc
     2281 tctcgggcac cttgaagacg ttctgcgcca gcatgttgcg cacgcgatgg ggatattgca
     2341 cgtcggcgta gagggtcatg cggtcttcgc cgggatcgta ggtgccgagc gtgccgcgcg
     2401 gctccatgta ctgggcatgc acgcgggtga tcacgtagcg ccgcttgatc accttggcgg
     2461 cgcccttgat cacctcgtcg gtggcggcct tgttgccgcg ctcgacgaag ttggagatgt
     2521 tgtcggggca atcgtcccat accgcggggg cgccgggctt cacggtatcg gcggtcgagg
     2581 tcaccgacgg gatcgcctcg tagtcgatgt tcaccagctc ggccgcgtcc ttggcctcgg
     2641 ccagcgtgtc ggcaatcacc atcgccaccg gatcgccgac atagcgcacg c
//
LOCUS       DASWGA010000252         4267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_410221, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000252 DASWGA010000000
VERSION     DASWGA010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4267
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410221"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1387)
                     /locus_tag="VF991_06125"
     CDS             complement(<1..1387)
                     /locus_tag="VF991_06125"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9556052.1"
                     /translation="MSAPLSLGIDIGGTFTDLVIHDPRDGRAVIWKESTTPGDPAVGA
                     LAGTRRVLEKAGARPEQVGRVVHATTLFTNALIERKGARTGLLTTAGFRDVLEIGRER
                     KYELYDLFIEMPKPLVARPWRREATERLAADGTVEIPLDVDAALAEVADLVKQGVESL
                     AICFLHAYANPAHERALGAAVAERFQNLSISLSSDIAPEIREYFRASTTVANAYIRPL
                     AEIYLERLEQTLRAEGIAGGLFLMLSNGGLTHVSEAKRAPVQLLESGPAAGALAGAWF
                     GRNAGLERVLAFDMGGTTAKLALVDDGEPLVAYGFEAAREKRFLRGSGLPIQIATVEL
                     IEIGAGGGSIARKSDLGTLNVGPDSSGAQPGPACYGRGGAEATVTDADLTLGYLNADF
                     FLGGAMQIDRAATDKAFGHLAKALGVEATRAAFGVHDVVNENMAGAARVAIAERGRIP
                     AEYALLATGGAG"
     gene            complement(1411..2376)
                     /locus_tag="VF991_06130"
     CDS             complement(1411..2376)
                     /locus_tag="VF991_06130"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9556053.1"
                     /translation="MLRRSLLAAPLVLGATSARAEWAPKQPIHVIVGFAPGGTADIAA
                     RIAGEAIQRRTGHTVVVDSKTGALGFIALKTVANSPPDGYTVGIGIMGSLAVAPVVPG
                     SQIPLDLDKELLPICNLVGVPMALIARPTAPYKTVAELVAYAKANPGKVTYGSTGNGS
                     TNQLGAELFAAEAGGLKLLHVPYRGGAPAIADVAAGQIDIFFANVSEIVGQINSGQVR
                     ALALASSTPNPMVPDLPLLTRDIPTLDINNWFGLVGPAGLPPDIVTGLAKLFLDAVGD
                     PASAPLLASRGLVAVPQDGPAFKATIMKDRERWAKVVKQGNIKAE"
     gene            2545..4146
                     /locus_tag="VF991_06135"
     CDS             2545..4146
                     /locus_tag="VF991_06135"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9556054.1"
                     /translation="MPLVHPAADVWTLLADIAEETPSAPAFIHGERTLSFGELLDCSA
                     RAAQGLADLGVGPGDRVALWLPNVPAYPILYFACVRLGAIAVAVNTRYRAVEVADIVG
                     RSGAKLLACAPGFRRIDFLSILADVDPAALDKLAAIVMVGEQAAAAPPVIERLRKVPY
                     DRLLSRPSLAANHALARAPCNIFTTSGTTSTPKFVLHRQGAIASHAQQVARVFGFDSA
                     DTLSLAILPLCGVFGFDQAMATLAAGKPSVLVESYEIEEIARLIAQHRPTTLFGSDDM
                     YARLLEMVPGERPFPSIKWAGYGAFNAALEDLPERAEQRGLILCGLYGMSEVQALYAR
                     QPIDAPVARRKLGGGLTVSPLAHVRVRDPDSGALLGPGQPGALECAGPSLMVGYYGNE
                     KATAEAMTPDGYVRTGDLAELDEHGGFTFLSRMGDVLRLSGFLVNPLEIETHLQKLPA
                     IADCQTIAVARPDGVRAVSFVILKPGAALDEAAAIAHCRRGLANYKVPVRVFAVDDFP
                     KTPSPNGFKIQRNRLREMAERLLLM"
BASE COUNT          627 a         1479 c         1463 g          698 t
ORIGIN      
        1 gtcccgcccc gccggtcgcc agcagcgcgt actcggcggg aatgcgcccg cgctcggcga
       61 tggccacgcg ggcggcaccg gccatgtttt cgttgaccac gtcgtgcaca ccgaaggccg
      121 cgcgggtcgc ctcgacgcca agcgccttgg ccaggtggcc gaacgccttg tcggtcgcgg
      181 cacggtcgat ctgcatggcg ccgcccagga agaagtcggc gttgagatag cccagggtca
      241 ggtcggcgtc ggtgacggtg gcttcggcgc cgccgcggcc gtagcacgcc ggaccgggct
      301 gggcgccgct gctgtcgggc ccgacattga gcgtgccgag atccgacttg cgcgcgatcg
      361 agccgccgcc ggcgccgatc tcgatcagct cgacggtggc gatctggatc ggcaggcccg
      421 agccgcgcag gaagcgtttc tcgcgcgccg cctcgaagcc gtaggcgacc agcggctcgc
      481 cgtcatcgac cagcgcgagc ttggccgtcg tgccgcccat gtcgaaggcg agcacgcgct
      541 cgaggccggc gttgcggccg aaccacgcgc cggccagcgc gccggcggcc gggccgcttt
      601 ccagcaactg caccggcgcg cgcttggcct cgctcacatg ggtgaggccg ccgttcgaca
      661 acatgagaaa gagtccgccg gcaatgccct cggcacgcaa cgtctgctcc agccgttcga
      721 gatagatctc ggcgagaggg cggatatagg cgttggcgac ggtcgtgctg gcgcggaaat
      781 attcgcggat ctccggcgcg atgtccgatg acagcgaaat cgacaggttc tggaagcgct
      841 cggccaccgc cgcgccaagc gcgcgctcgt gcgccggatt ggcgtaggcg tgcaggaagc
      901 agatggcgag gctttcaacg ccctgcttca ccaggtcggc gacctcggcc agcgccgcat
      961 cgacgtcgag cggaatttcc accgtgccgt cggccgccag ccgctcggtg gcctcgcgcc
     1021 gccacggccg cgccaccagg ggcttgggca tttcgatgaa gagatcgtag agctcgtact
     1081 tgcgctcgcg gccgatctcc agcacgtcgc gaaagcccgc ggtcgtcagc agcccggtcc
     1141 tggcgccctt gcgctcgatc agcgcgttgg tgaagagggt cgtggcgtgg accacgcggc
     1201 caacctgctc gggcctcgca cccgccttct ccagcacccg gcgcgtgcct gcgagcgcgc
     1261 cgaccgccgg gtcgccgggc gtggtgcttt ccttccagat gacggcgcgg ccgtcgcgcg
     1321 gatcgtggat gacgagatcg gtgaacgttc ccccgatgtc gatgccgagg gacaatggtg
     1381 cactcatcgt gccgtcatga cggtggttga tcattccgct ttgatattgc cctgcttcac
     1441 caccttcgcc cagcgctcgc gatctttcat gatggtcgcc ttgaaagcgg ggccgtcctg
     1501 cggaacggcg accagcccgc gcgatgccaa gagcggcgcg ctggccggat cgccgacggc
     1561 atcgaggaag agcttggcga ggcctgtgac gatgtcgggc ggcagcccgg ccgggccgac
     1621 caggccgaac cagttgttga tgtcgagcgt cggaatgtcc cgggtgagca gcggcaggtc
     1681 aggcaccatc gggttgggcg tcgacgaggc gagagcgagt gcgcgcacct ggccgctgtt
     1741 gatctgtccc acgatctccg agacgttggc gaaaaagata tcgatctggc ccgccgccac
     1801 gtcggcgatg gccggcgcgc cgccgcgata gggcacgtgc agcagtttca gcccgcccgc
     1861 ttccgccgcg aacagctcgg cgccgagctg gttggtcgag ccgttgccgg tcgagccata
     1921 ggtcaccttg ccgggattgg ccttggcgta ggctacaagc tcggcgacgg tcttgtaggg
     1981 cgcggtcggc cgcgcgatca gcgccatcgg cacgccgacg agattgcaga tcggcaaaag
     2041 ctccttgtcg aggtcgagcg ggatttgcga tcccggcacg accggcgcca cggcgagcga
     2101 gcccatgatg ccgatgccca ccgtgtagcc gtcgggtggt gaattggcga cggtcttgag
     2161 cgcgatgaag cccagcgcgc cggtcttgct gtcgacgacc acggtatgac cggtgcggcg
     2221 ctggatcgcc tcgccggcga tgcgcgcggc gatatcggcg gtgccgccgg gcgcgaagcc
     2281 cacgatgacg tggatcggct gcttgggcgc ccactcggca cgggccgagg tggcgcccag
     2341 aaccagcgga gcagcgagca gacttcgacg caacatgatt tgatcccctc ctcacattcc
     2401 tcgccacgat gccctcaagc tcctctcccc cgctaggggg agaggtcggg tgagggggct
     2461 acgcacgtcg tcgccccctc tcctagcctc tccccctagc gggggagagg aatttcgaca
     2521 gccttgcggt agtctccgcg ccgcatgccg ctcgttcatc ccgccgccga tgtctggacc
     2581 ctgctcgccg acatcgccga agagactccg tctgcgccgg ccttcatcca tggcgagcgc
     2641 acgctgtcct tcggcgagct gctcgattgt tcggcgcgtg cggcccaggg cttggccgat
     2701 ctcggcgtcg ggccgggcga tcgcgtggcg ctgtggctgc ccaacgtgcc ggcctatccc
     2761 attctttatt tcgcctgcgt gcgcctgggc gccatcgctg tcgcggtgaa cacgcgctac
     2821 cgcgcggtcg aggtcgccga catcgtcggc cgctcgggcg ccaagctgct ggcctgtgcc
     2881 ccgggctttc gccgtatcga cttcctgtcg atcctggccg atgtcgatcc ggcggcgctc
     2941 gacaagctcg ccgcgatcgt catggtcggc gaacaagcgg cggcagcgcc gcccgttatc
     3001 gagcggctgc gcaaggtgcc atacgaccgc ctgctgtcgc gcccctcgct cgccgccaac
     3061 catgcgctgg cccgtgcgcc ctgcaacatc ttcaccacgt cgggcacgac cagtacgccg
     3121 aagttcgtgc tgcatcgcca gggcgcgatc gcgagtcacg cccagcaagt ggcgcgcgtc
     3181 ttcggcttcg actcggccga cacgctgtcg ctggcgatcc tgccgctctg cggcgtgttc
     3241 ggcttcgacc aggcgatggc gacgctcgcc gccggcaagc cgtcggtgct ggtcgagtcg
     3301 tacgagatcg aggagatcgc acggctgatc gcgcaacacc ggccgacgac cctgttcggc
     3361 agtgacgaca tgtacgcccg cctgctcgag atggtgccgg gcgagcggcc gttcccgtcg
     3421 atcaagtggg cgggctatgg cgccttcaat gccgccctcg aagacctgcc cgagcgcgcc
     3481 gagcagcgtg gcctgattct gtgcggcctc tacggcatga gcgaggtcca ggcgctctac
     3541 gcccgccagc caatcgacgc gccggtcgcg cgccgcaagc tgggcggcgg gctcacggtc
     3601 tcgccgctcg ctcatgtgcg ggtgcgcgat ccggacagcg gcgcactgct tggtcccggc
     3661 cagccgggcg cgctggaatg cgcgggcccg tcgctgatgg tgggctacta cggcaatgag
     3721 aaggcgaccg ccgaggcgat gacgcccgac ggctacgtgc gcaccggtga cctcgccgag
     3781 ctcgacgagc atggcggctt cacctttctc agccgcatgg gcgatgtcct cagactctcc
     3841 ggcttcctgg tcaatccgct cgagatcgag acccatctgc agaagctgcc ggccatcgcc
     3901 gactgccaga ccatcgccgt ggcgcgaccc gatggcgtgc gcgcggtctc gttcgtgatc
     3961 ctcaagcccg gcgcggcgct cgacgaggcg gccgccatcg cccactgccg gcgcgggctg
     4021 gccaactaca aggtgccggt gcgcgtgttc gcggtcgacg acttccccaa gacgccctcg
     4081 cccaacggct tcaagatcca gcgcaacagg ctgcgcgaga tggcggagcg cctgctgctg
     4141 atgtgactcg ttttcttccg gaccagaaga gcatgagtgc tcccaacccg gagaaacctt
     4201 ggtggccgaa acgttggtca cgctgggagc ccgcaaatga atttccgcaa tttccgcaag
     4261 cgctacg
//
LOCUS       DASWGA010000253         6607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_657847, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000253 DASWGA010000000
VERSION     DASWGA010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6607
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_657847"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VF991_06140"
     CDS             <1..219
                     /locus_tag="VF991_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008552329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX9556055.1"
                     /translation="LDQTPWPATPPVALEAPRGTLVVLHGLLPHASAPNRSARPRHAY
                     ALHLIDGRAEYAPDNWLQRPDLPLRGFV"
     gene            216..1175
                     /gene="add"
                     /locus_tag="VF991_06145"
     CDS             216..1175
                     /gene="add"
                     /locus_tag="VF991_06145"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009463922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004000 - adenosine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0043101 - purine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HEX9556056.1"
                     /translation="MIPKAELHVHLEGSVPPALARALATRNGLDVPIGLIGEAGHYVL
                     TDFLSFLAAYDLVCTTLRTAQDFSDVIYAYLASIARQGAVYAEMFCSPERPAALGIPY
                     SVWLEALEAGIDRARTDFGIEGRIIIICIRHLGPKRALAMVRTMVSEPHRYVVGFGMG
                     GDEAKYVPADFAPAYRLAHDKGFGCTVHAGEVLGPESVWAAITELPVSRIGHGVRSAD
                     DPVLMAELARRGIVLEVCPGSNIALGLYPDRNAHPLHRLIDAGVRVTLGSDDPPFFHT
                     TLGDEYDKAGLAESVLRHITRTAIEASFADEATKQRLLREIGP"
     gene            1172..2023
                     /locus_tag="VF991_06150"
     CDS             1172..2023
                     /locus_tag="VF991_06150"
                     /inference="COORDINATES: protein motif:HMM:NF015709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family acid phosphatase"
                     /protein_id="HEX9556057.1"
                     /translation="MIARKFLVLGTVLAALSAGAVRAQEVAPSDMLLATLWTQRSVEY
                     RGNALTVFALAKIRLDQALADKSWTAAPGEQKGDYQNLPPAVVLDVDETLLDNSLYQV
                     WMLKNNQTFSTKTWNQFCAAQVSTAIPGAVDFAKYADSKGVKVFYISNRDASTEKDTR
                     ENMEKLGFPMGGNVDTFLMQNEQKEWGSAKSTRRAVVTKDYRVLLNIGDNFGDFDDRY
                     RSSEAERAKAFDSDMAYWGKQWLVIANPTYGSFDTATYGHDFKKPLPEQRKAKWDVLE
                     SWVGPKP"
     gene            complement(2064..3155)
                     /gene="ugpC"
                     /locus_tag="VF991_06155"
     CDS             complement(2064..3155)
                     /gene="ugpC"
                     /locus_tag="VF991_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX9556058.1"
                     /translation="MAEVSLHKLNKKFDLSHVVKDVDLQIHDKEFMVFVGPSGCGKTT
                     TLRMIAGLEAVTAGEIRIDDRVVNEVPPMDRDIAMVFQNYALYPHMSVASNLAFGLKM
                     RKFEKAEIEKRINNAASILGIESLLQRKPRQLSGGQRQRVALGRAIVRDPKVFLFDEP
                     LSNLDAKLRVQMRVELKRLHERLAVTSVYVTHDQVEAMTLGDRVVVMKDGVVQQVGEP
                     LELYNAPSNRFVAGFIGSPAMNFADVTLVENGGKPVAEAPGLRIGLPGALAARARSKA
                     GRKATLGIRPEDIHIASAADAPEYCFDAVVEVVEQLGSEILLDTRVGPALMVASVEPT
                     LRMRAHDNLKLALKPERLHLFDAETEAAI"
     gene            complement(3162..4013)
                     /locus_tag="VF991_06160"
     CDS             complement(3162..4013)
                     /locus_tag="VF991_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9556059.1"
                     /translation="MIEGALWRRWVFYNIPLILFVFVLLFPFYWMIITTFRPDGELYR
                     PWNAVNYMPFWTNHPTLEHIQYLFEETSFARWMFNTMFIALASTIISLFCGVLAGYAL
                     ARLNFPYAGSLGTVIFVTYLVPQTLLFIPLAQIIRNFELGDTPWSLILTYPTFLIPFC
                     TWLMMGYFKAIPKELEECARIDGASRWKAMVYIIIPVAVPGILSSGIIAFTLSWNEFI
                     YALVFLSSPDQKTVPVGVTSELIRGDVFFWGPLMAGALLGSIPVAIVYSFFVEHYVSG
                     LTGSVKG"
     gene            complement(4016..4945)
                     /locus_tag="VF991_06165"
     CDS             complement(4016..4945)
                     /locus_tag="VF991_06165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9556060.1"
                     /translation="MAVTAVSGADVRRPVPRLRRLEDERWLAMALLLPTAVLLGLFIA
                     YPFIEGVLLSLTSQRVGIPGEFVGLQNFVKIWNDSIFRTTVWNTFWYTGVTTVFKLAL
                     GLWLAMLLNRHFRGKALVRAFILLPFIIPTVLSTFAWKWMFDPTFSVINWTLFQLGFI
                     SQRINWLGDPDLAMTSIIIVNIWRGVPFFAISLLAGLQTISPELNEAAAIDGARPWNR
                     FWYVTWPLLLPVTMVVMLFSVIQTFADFQLVYVMTGGGPANATHLFATYAYQLGIGTG
                     LLSEGAAISLAMFPFLFIIVVVQLLYIRRVEIR"
     gene            complement(4982..6307)
                     /locus_tag="VF991_06170"
     CDS             complement(4982..6307)
                     /locus_tag="VF991_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9556061.1"
                     /translation="MVQTKRRSVIKLAGSAAAVASTGMAGILATGRSPAFAQQKTVHW
                     LKWVDFVPATDQMFNKELMPAAEKDLGIKMKLETVNGNDLQPRITAAIQSGAGPDLIM
                     SFNSYTHLYANSVVDMSELAEDVGKREGGLYKYARAICSDGKVFMGMPWAVIGGMIAY
                     RKSWWDEIGVTKFPDTWESYREAGKKLKAKGRPLGQTLGHTFGDAPGFSYPYLWSWGG
                     KEVEADGKTVVINSKETLESVKFMTGFWKDAHDEGGLAWDDTNNNRAFLSQTISATLN
                     GASIYIESLRKPDQYKTEKGEFLNKDILHAPLPKGPAGQFGFHLLQSNMLMKYSKNQD
                     AAKEFLKWLHAEANYRKFFESQKGFATPCTAKWESDKLWDVDPVMTPYKVAARLGQAI
                     GNAGPPNAKAQEVLSKYIITDMYAKAVQGMPAEDAVKWAESELKKVYAG"
     gene            complement(6405..>6607)
                     /locus_tag="VF991_06175"
     CDS             complement(6405..>6607)
                     /locus_tag="VF991_06175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008833823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9556062.1"
                     /translation="VNETSRIASMCRSVDRPVLISSSFADALPAAKRANLVSVGRFAL
                     RGVGQAKELFTLDPGLISPVQP"
BASE COUNT         1214 a         2098 c         2139 g         1156 t
ORIGIN      
        1 ctcgaccaga cgccgtggcc tgccacgccg ccggtggcgc tcgaagcgcc gcgcggcacc
       61 ctggtggtgc tgcatggact gctgccccat gccagcgcgc ccaaccggtc ggcccggccg
      121 cgccatgcct atgccttgca cctgatcgac gggcgtgcgg aatatgcacc cgacaactgg
      181 ctgcaaaggc ctgacctgcc gctgcgaggg ttcgtgtgat tcccaaggcc gaactgcatg
      241 tccatctcga aggatcggtc ccaccggcgt tggcccgcgc gctggcgacg cgcaacggcc
      301 tggatgtgcc gatcggcctg atcggcgagg ccggccacta cgtgttgacc gattttttaa
      361 gcttcctcgc cgcctacgac ctcgtctgca ccaccttgcg cacggcgcag gactttagcg
      421 acgtgatcta cgcctacctc gccagtatcg cgcgccaggg cgccgtctat gccgaaatgt
      481 tctgctcgcc cgagcggccg gcggccctcg gcatccccta cagcgtctgg ctcgaggcgc
      541 tggaggccgg tatcgaccgt gcccgaaccg acttcggcat cgagggccgg atcattatca
      601 tctgcatccg tcatcttggg cccaagcgcg cgctggccat ggtgcgcacc atggtgagcg
      661 aaccgcaccg ctatgtcgtg ggcttcggca tgggcggtga cgaggccaaa tacgtgcccg
      721 ccgacttcgc gccggcctat cggctggccc acgacaaggg ctttggctgc accgtccatg
      781 ccggcgaggt tttggggccg gaaagcgtgt gggcggccat caccgagctg ccggtcagcc
      841 gtatcggcca cggcgtgcgc tcggccgacg atcccgtcct gatggccgag ctggcgcgcc
      901 gcggcatcgt cctggaagtc tgtcccggca gcaacattgc actgggcctg tatccggacc
      961 gtaacgccca cccgctccat cggttgatcg acgcgggcgt tcgcgtcacg ctcggttccg
     1021 acgacccgcc cttttttcac accacgctcg gggacgaata cgacaaggcg ggtcttgcag
     1081 agtccgtcct caggcacatc acgcggacgg cgatcgaagc atcattcgcc gacgaggcga
     1141 ccaaacaaag gctgttgagg gagatcggac catgatcgca aggaagttcc tggtactcgg
     1201 caccgtactt gccgcgctct ccgctggcgc cgtccgggcg caggaagtgg cgcccagcga
     1261 catgctgctg gccacgctgt ggacgcagcg ctcggtcgaa tacagaggca atgcgctcac
     1321 ggtgttcgcg ctggccaaga tcagactcga tcaggcgctg gccgacaaga gctggacggc
     1381 ggcacctggg gagcagaaag gcgactacca gaacctgccg cccgccgtcg tgctcgacgt
     1441 cgacgagacg ctgctcgaca actcgctcta ccaggtgtgg atgctgaaga acaaccagac
     1501 cttcagcacc aagacgtgga accagttctg cgccgcgcag gtctcgacgg cgatcccggg
     1561 cgccgtcgac ttcgccaaat acgccgattc caagggcgtg aaggttttct acatctccaa
     1621 ccgcgacgcc tcgaccgaga aagacacgcg cgagaacatg gagaagctcg gcttcccgat
     1681 gggcggcaat gtcgacacct tcctgatgca gaacgagcag aaagagtggg gcagcgccaa
     1741 gagcacgcgc cgcgcggtcg tgaccaagga ctaccgcgtc ctgctcaaca tcggcgacaa
     1801 tttcggcgac ttcgacgacc gctatcgctc gagcgaggcc gagcgcgcca aggccttcga
     1861 ttcggacatg gcctactggg gcaagcagtg gctggtcatc gccaacccga cctacggctc
     1921 gttcgacacc gcgacctacg gccacgactt caagaagccg ctccccgagc agcgcaaggc
     1981 caagtgggac gttctggagt cctgggtcgg tcccaagccg tagagctcat cgctgggagc
     2041 gtgcccgaca aagcgatccg aaactaaatc gccgcttctg tctcggcgtc gaacaagtgg
     2101 aggcgctcgg gcttcagcgc cagcttgagg ttgtcgtggg cgcgcatgcg cagcgtcggc
     2161 tcgacactcg ccaccatcag ggcaggcccg acgcgggtat cgagcaggat ctccgagccg
     2221 agctgctcga ccacctcgac gacggcatcg aagcaatatt ccggcgcgtc cgcggcgctt
     2281 gcgatatgga tgtcctccgg ccggatgccg agcgtggcct tgcggccggc cttggaccgg
     2341 gcccgtgcgg ccagtgcacc gggcaacccg atccgcagcc ctggcgcctc ggcgacgggc
     2401 ttgccgccat tttccaccag ggtcacgtcg gcgaaattca tggccggcga gccgatgaag
     2461 cccgccacga agcggttgga cggggcgttg taaagctcca gtggctcacc gacctgctgg
     2521 accaccccgt ccttcatcac caccaccctg tcgcccagcg tcatggcctc gacctggtcg
     2581 tgggtgacgt agaccgaggt gacagccagc cgctcatgca gcctcttcag ttcgacgcgc
     2641 atctgcacgc gcagcttggc gtcgaggttg ctgagcggct cgtcgaacag gaacaccttg
     2701 gggtcgcgca cgatggcgcg gccgagcgcc acgcgctggc gctggccgcc cgagagctgg
     2761 cgcggcttgc gctgcagcag gctctcgatg ccgaggatgc tggcggcgtt gttgatgcgc
     2821 ttctcgattt cggccttctc gaacttccgc atcttcaagc caaacgccaa gttggaggcg
     2881 acgctcatat gcggatagag cgcgtagttc tggaacacca tggcgatatc gcgatccatc
     2941 ggcggcactt cgttgaccac ccggtcgtca atgcggatct cgccggcggt gacggcttcg
     3001 aggccggcga tcatgcgcaa ggtcgtggtc ttgccgcagc ctgacggtcc gacgaagacc
     3061 atgaattcct tgtcgtggat ctgcaggtcg acgtccttca ccacgtgact gaggtcgaac
     3121 ttcttgttga gcttgtggag gctgacctcg gccatgacgc gttacccctt gaccgagccg
     3181 gtaaggccgg aaacgtagtg ttcgacgaag aacgaataga cgatcgccac cgggatcgag
     3241 cccagcagcg cgcccgccat cagcggtccc cagaagaaca cgtcgccgcg gatcagctcc
     3301 gaggtgacgc cgaccggcac ggtcttctgg tcgggcgagg acaggaacac cagggcgtag
     3361 atgaactcgt tccacgacag ggtgaaggcg atgatgccgg acgacaggat gccgggaacc
     3421 gccaccggga tgatgatgta gaccatcgcc ttccagcgcg aggcgccgtc gatgcgggcg
     3481 cactcctcga gttccttggg gatggccttg aagtagccca tcatgagcca cgtacagaac
     3541 ggtatgagga acgtcggata ggtcaggatc agcgaccacg gcgtgtcgcc cagctcgaaa
     3601 ttgcggatga tctgcgccag cgggatgaac agtagcgtct gcggcaccag ataggtgacg
     3661 aagatcacgg ttcccaggct gccggcgtag ggaaagttga gccgggccag cgcatagccc
     3721 gccagcacgc cgcagaacag cgagatgatg gtcgacgcca aggcgatgaa catcgtgttg
     3781 aacatccagc gcgcgaacga cgtctcctcg aacagatact ggatgtgctc gagcgtcgga
     3841 tggttggtcc agaacggcat gtagttgacg gcgttccacg gccggtagag ttcgccgtcc
     3901 gggcgaaagg tcgtgatgat catccagtag aacggaaaca gcaggacgaa gacgaacagg
     3961 atcagcggga tgttgtagaa gacccatcgt ctccagaggg cgccttcgat catggtcagc
     4021 gaatctccac gcggcggatg tagagaagct ggaccaccac gatgatgaac aggaacggga
     4081 acatggcgag cgagatcgcc gctccctccg agagcaggcc ggtgccgatg ccgagctggt
     4141 aggcgtaggt ggcgaacaga tgcgtggcgt tggccggtcc gccgccggtc atgacgtaga
     4201 cgagctggaa gtcggcgaag gtctggatca ccgagaacag catcaccacc atggtgaccg
     4261 gcagcagcag cggccaggta acgtaccaga agcggttcca cggccgggcg ccgtcgatgg
     4321 cggcggcctc gttcagctcg ggactgatgg tctgcaggcc ggccagcagc gagatggcga
     4381 agaacggcac gccgcgccag atgttgacga tgatgatcga ggtcatggcg aggtcgggat
     4441 cgcccagcca gttgatgcgc tggctgatga atcccagctg gaacagcgtc cagttgatga
     4501 cactgaaggt ggggtcgaac atccacttcc aggcgaaggt cgacagcacc gtgggaatga
     4561 tgaagggcag caggatgaag gcgcggacca gcgccttgcc cctgaagtga cggttgagca
     4621 gcatcgccag ccacaggccg agcgccagct tgaacaccgt ggtgacgcct gtgtaccaga
     4681 acgtgttcca caccgtggtc cggaagatgc tgtcgttcca gatcttgacg aagttctgca
     4741 ggccgacgaa ctcgccgggg atgccgacgc gctggctggt cagcgacagc agcacaccct
     4801 cgatgaacgg ataggcgatg aacaatccga gcagcacagc cgtgggcagc agcagcgcca
     4861 tcgccagcca gcgctcgtcc tccaggcgcc gcagtcgcgg gacggggcgc cgaacgtccg
     4921 cgcccgagac tgcggttact gccattcact cgctccttgc attacgcaac gccgacgagg
     4981 ctcagcctgc gtagaccttc ttcagttccg actcggccca cttcaccgcg tcctcggccg
     5041 gcatgccctg cacggctttg gcatacatgt cggtgatgat gtacttcgac agcacttcct
     5101 gggccttggc gttgggcggt ccggcgttgc caatggcctg gccgagcctg gccgcgacct
     5161 tgtagggcgt catgaccgga tcgacgtccc acagcttgtc gctttcccac ttggcggtgc
     5221 acggcgtggc gaagcccttc tgcgattcga agaatttccg gtagttggcc tcggcgtgga
     5281 gccacttcag gaactccttc gccgcgtcct ggttcttgga atacttcatc agcatgttcg
     5341 actgcagcag atggaagccg aactggccgg ccgggccctt gggcagcggc gcgtgcagga
     5401 tgtccttgtt caggaactcg cccttctcgg tcttgtactg gtccggcttg cgcagcgact
     5461 cgatgtagat cgaagcgccg ttcagcgtcg ccgagatggt ctgcgacagg aatgcacggt
     5521 tgttgttggt gtcgtcccag gcaaggccgc cctcgtcatg ggcgtctttc cagaagccgg
     5581 tcatgaactt gaccgactcg agcgtctcct tggagttgat gacgacggtc ttgccgtcgg
     5641 cctcgacctc cttgccgccc cacgaccaca ggtacgggta gctgaagccc ggcgcgtcgc
     5701 cgaaggtgtg gccgagcgtc tggccgagcg gccggccctt ggccttcagc ttcttgccgg
     5761 cctcgcggta gctctcccag gtgtcgggga acttggtgac gccgatctcg tcccaccacg
     5821 acttgcggta ggcgatcatg ccgccgatca cggcccacgg catgcccatg aacaccttgc
     5881 cgtcgctgca gatggcgcgg gcgtacttgt agagcccgcc ctcgcgcttg ccgacgtcct
     5941 cggcgagctc actcatgtcg acgacgctgt tggcatagag atgggtgtag ctgttgaacg
     6001 acatgatcag gtcgggaccg gcgcccgact ggatggcggc cgtgatgcgc ggctgcagat
     6061 cgttgccgtt caccgtctcg agcttcatct tgatgcccag gtccttttcg gccgccggca
     6121 tcagctcctt gttgaacatc tggtcggtcg ccggcacgaa gtcgacccac ttcaaccaat
     6181 ggacggtctt ctgctgggcg aaggccgggc tgcggccggt ggcgagaatg ccggccatgc
     6241 cggtcgacgc cacggcggcg gcgcttccgg caagcttgat gacgctgcga cgcttggtct
     6301 gaaccatact ttcctcccga tgaccaccgc ctcattggac ggcactttta ttgccgtcat
     6361 ggtaggcatc gggatgcagc cgggcaagcc ggcactcgga aattttacgg ttggacgggc
     6421 gagataaggc ctggatcgag tgtgaatagt tccttggctt ggccgacgcc gcgcagagcg
     6481 aacctcccga ccgacacgag gtttgcccgt ttggcggccg gcagcgcgtc ggcaaacgaa
     6541 gatgagatca acaccggccg atcgaccgaa cggcacatcg aggcgatgcg gctggtctcg
     6601 ttgaccg
//
LOCUS       DASWGA010000254         3606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_537558, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000254 DASWGA010000000
VERSION     DASWGA010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3606
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_537558"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..738
                     /gene="era"
                     /locus_tag="VF991_06180"
     CDS             <1..738
                     /gene="era"
                     /locus_tag="VF991_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010969022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEX9556063.1"
                     /translation="LVDTPGIFRIAKRRLERAMVAAAWQGADDADLVALVVDAERGVG
                     PETQAIVERLKERRTPRYLVLNKIDLVPREKLLSLTAELNAIVPFERTFMVSALKQDG
                     VKDVLATLAAALPEGPFLYPEDQAADLPLRLLAAEVTREQVFLQLHQELPYEAAVETE
                     KWEDRPDGSVRIEQTIHVQRDGQRAIFLGKGGARIKQIGARARHELGQMLERPVHLFL
                     HVKVSERWADDPAHYRAIGLDYEPKSS"
     gene            complement(864..2414)
                     /locus_tag="VF991_06185"
     CDS             complement(864..2414)
                     /locus_tag="VF991_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HEX9556064.1"
                     /translation="MIRLKRRRLLASGALAAALPRRVFAQTAASARPQLLQGVQTGDF
                     AADGATVWSRSDRPARMFVDYATTESFSDSKRLTGPLALEATDFTSRLRLRDLPPGQT
                     VFYRVSYLDLGDYKTMSEPVTGRFRTPPASGADVSFVWSADAVGQGWGINPDVGGMTI
                     YESMRKLGPDFFVHCGDTIYADNPLAAEKKLADGRIWKNLLSDAKAKVAETLDEFRGN
                     HRYNFLDDNLRRLQAEVPMVALWDDHEVVDNWYWERRLDGDPRYRQKSAAVLAAYAQR
                     AFREYMPLDQDLDEPMRLYRKFSWGSRLDLFRIDMRSFRGPNGPNRQTVAGPDTAFLG
                     VEQIAWLKQALKASTATWKIIAADMPLGLVVYDDFRTKTGSEAVANGDDGNPLGRELE
                     IADLLAFIKQQDIRNVHWITADVHYAATHRYDPHRAAFTDFTPFYEFVSGPLCAGGFG
                     PNALDQTFGPEVVFQKVPPPGRFDLSPIEGSCHFGHVKIDGTSGGMTVTHRDATGGVL
                     HALNLAPS"
     gene            2459..3175
                     /gene="recO"
                     /locus_tag="VF991_06190"
     CDS             2459..3175
                     /gene="recO"
                     /locus_tag="VF991_06190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEX9556065.1"
                     /translation="MDWSDEGIVLSTRPHGETGLIASLLTRDHGRHAGFVPGGVSRRA
                     RPIWQPGNLVKVEWRARLSEQLGNYSGELREPHAAAALDDAAELAGLAAACALIDAAL
                     AERESHPAIFDGFRAFLGALGHAGWPAIYVRLELGLLQELGFGLDLEKCAATGATEDL
                     AYVSPKTGRAVSRLAAGPYKEKLLELPAFLSTGGLPSDDDQLRKGLDLTGYFLERHVF
                     WPHNKPLPAARSRFMETLQR"
     gene            3242..>3606
                     /locus_tag="VF991_06195"
     CDS             3242..>3606
                     /locus_tag="VF991_06195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEX9556066.1"
                     /translation="MAKRNNVVPLAVVKPVQFGQALRERYLSYALSTIMARSLPDVRD
                     GLKPVHRRLLYAMRQLRLDPNSAFKKSARVVGDVIGQYHPHGDQSIYDALVRLAQEFA
                     ARYPLIEGQGNFGNIDGDNP"
BASE COUNT          598 a         1182 c         1225 g          601 t
ORIGIN      
        1 ctggtcgaca cgccgggcat cttccgcatc gccaagcgcc gcctcgagcg ggccatggtc
       61 gccgccgcct ggcagggcgc cgacgacgcc gacctcgtgg cgctggtggt cgatgccgag
      121 cgcggggtgg ggcccgaaac gcaggccatc gtcgagcgac tgaaggagcg gcggacgccg
      181 cgctacctgg tcctgaacaa gatcgacctg gtgccgcgtg aaaagttgct ttcactcacc
      241 gccgagctga acgcgatcgt gccgttcgag cgcaccttca tggtgagcgc gctcaagcag
      301 gacggcgtga aggacgttct cgcgaccttg gcggcggcgc tgccggaagg gccgttcctc
      361 tatcccgagg accaggccgc agacctgccg ctgcgcctgc tggcggccga agtcacgcgc
      421 gagcaggtgt tcctgcagct ccatcaggag ctgccctacg aggccgcggt cgagaccgag
      481 aaatgggagg accggcccga cggcagcgtg cgcatcgagc agaccatcca cgtccagcgc
      541 gacggccagc gcgccatttt cctcggcaag ggcggcgcgc gcatcaagca gatcggcgcg
      601 cgggcgcgcc atgagctcgg ccagatgctg gagcggccgg tgcatctctt cctgcacgtc
      661 aaggtgagcg agcgctgggc tgacgatccg gcgcactacc gtgcgatcgg cctcgactac
      721 gaacccaagt catcctgagc gcagcgaagg atctcatcgc ccgcagtcat cgacgacgga
      781 gtcgcccggg aaacagcgaa cctgcgatca acttccatga gatgcttcgc tgcgctcagc
      841 atgacagagt ttctggcagg tcctcagctc ggcgcgagat tgagcgcgtg caggacgccg
      901 ccggtggcgt cgcgatgggt gactgtcatg ccgccgctgg tgccgtcgat tttaacgtgg
      961 ccgaaatggc acgagccttc gattggcgac aggtcgaagc ggccgggcgg cggcaccttc
     1021 tggaagacga cttccgggcc gaaagtctgg tcgagcgcgt tggggccgaa gccgccggcg
     1081 cacagcgggc cggacacgaa ctcgtagaaa ggggtgaagt cggtgaaggc cgcgcgatgg
     1141 ggatcgtagc gatgggtcgc cgcatagtgc acatcggcgg tgatccagtg cacgttgcgg
     1201 atgtcctgct gcttgatgaa ggccagcagg tcggcgatct cgagctcgcg gccgagcggg
     1261 ttgccgtcgt cgccgttggc caccgcctcc gagcctgttt tggtgcggaa gtcgtcatag
     1321 accacgagtc ccagcggcat gtcggcggcg atgatcttcc aggtcgcggt cgaagctttg
     1381 agcgcctgct tcagccaggc gatctgctcg acgccgagga aagccgtatc gggtccggcg
     1441 acggtctgcc ggttgggtcc gttggggccg cggaagctcc tcatgtcgat tcggaaaaga
     1501 tcgagtcgcg atccccagga aaacttgcgg taaagccgca tcggctcgtc gaggtcttga
     1561 tcgagcggca tgtattcgcg gaacgcccgc tgggcgtagg cggccagcac ggcggcgctc
     1621 ttctgccgat agcgcgggtc gccatcgagc cggcgttccc agtaccagtt gtcgacgact
     1681 tcatggtcgt cccacagcgc caccatcggc acttccgcct ggaggcggcg caaattgtcg
     1741 tcgaggaaat tgtagcgatg gttgccgcgg aattcgtcga gcgtctcggc cacttttgcc
     1801 ttggcgtcgc tcaaaaggtt cttccagatc cggccgtccg ccagcttctt ctcggccgcc
     1861 aacgggttgt cggcgtagat cgtgtcgccg caatggacga agaagtcggg cccgagcttg
     1921 cgcatggact cgtagatcgt catgccgccc acatcgggat tgatgcccca gccctggccg
     1981 accgcgtcgg ccgaccagac gaagctcacg tcggcgccgg aagcaggcgg cgtgcggaag
     2041 cgccccgtca ccggctcgct catggtcttg tagtcgccga gatcgagata ggacacgcga
     2101 tagaagacgg tctggccggg cggcaggtcg cgcaggcgca ggcgcgacgt gaagtcggtg
     2161 gcctcgagcg ccaacggacc cgtgaggcgc ttgctgtcgc taaagctttc ggtcgtggcg
     2221 tagtccacga acatgcgcgc cggacggtcc gagcggctcc acaccgtggc gccatcggcc
     2281 gcgaagtcgc cggtctgcac gccctgcagg agctgcggtc gcgccgatgc cgccgtctgg
     2341 gcgaagacgc ggcggggcag ggcggcagcg agcgcgccag acgccagcaa ccggcgtcgt
     2401 ttcaacctga tcatgcgcca gcctagcgcg aatcgatgaa acgcgtcata cccgccgcat
     2461 ggattggagc gatgaaggca tcgtgctgtc gacgcggccc cacggcgaga ccggcctcat
     2521 tgcatcgctg ctgacccgcg atcacggtcg ccatgccggc ttcgtcccgg gcggcgtgtc
     2581 gcggcgcgcg cggccgatct ggcagcccgg caacctcgtg aaagtcgaat ggcgggcgcg
     2641 tctgtccgag cagctcggca actattcagg cgagctgcgc gaaccccatg cggcggcagc
     2701 cctcgacgat gccgccgagc tggccgggct cgccgccgcc tgcgccctga tcgatgccgc
     2761 cctggccgag cgcgagtcgc atccggcgat attcgacggc tttcgcgcct tcctgggcgc
     2821 gctcggccat gcgggctggc ctgccatcta tgtccggctg gaactcgggc ttttgcagga
     2881 gctgggcttc ggcctcgacc tcgagaagtg tgcggcgacc ggcgccaccg aggatctggc
     2941 ctatgtctcg cccaagaccg gccgcgccgt gtcgcgcttg gccgccgggc cctacaagga
     3001 gaagctgctc gagctgccgg cgtttctgtc caccggcggg ttgccgtcgg acgacgatca
     3061 actgcgcaaa ggccttgatt tgacgggtta tttcctcgaa cgccacgtgt tttggccgca
     3121 caacaagccc ttgcctgccg cgcggtcgag atttatggaa acgctccagc gctagaatca
     3181 acaagggctg cggcttgaac cgtggccggt ccccctcgaa tacggcccgc aagtccggta
     3241 gatggcaaaa cgcaacaacg tcgttccgct ggcggtggtc aagccggtgc aattcggaca
     3301 ggcgctccgc gagcgttacc tgtcctacgc gttgtcgacc atcatggccc gctcgctgcc
     3361 cgacgtgcgc gacgggctga agccggtcca tcgccgcctg ctctacgcca tgcgccagtt
     3421 gcggctcgac cccaacagcg ccttcaagaa gagcgcccgc gtggtcggcg acgtgatcgg
     3481 ccagtatcac ccgcacggcg accagtcgat ctatgacgcc ctggtgcgtc tcgcccagga
     3541 attcgccgcc cgctatccgc tgatcgaagg gcagggcaat ttcggcaata tcgacggcga
     3601 taaccc
//
LOCUS       DASWGA010000255         3293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1801435, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000255 DASWGA010000000
VERSION     DASWGA010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1801435"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..1207
                     /locus_tag="VF991_06200"
     CDS             11..1207
                     /locus_tag="VF991_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556067.1"
                     /translation="MKRIHIGRRAALAGGVAAFASPAVLRAQSDPIKLATLTPLTGAG
                     GSYGPTMAKVAASVVEEVNKAGGVLGRRVVLVSEDDQTSPEAGVRAARKLIDVDKVAA
                     IMGTWASSVTTAVAPLCWESKTFLCTVSGADSITLLPHQGFLVRTQPNSTLQVTRVGE
                     FILSLGAKKVFTMIPQTPFTQSTFDILNAVLPKGGATHQSLIYDDKKTTYRTEVDQAL
                     RTSPDVILANGYTPDSIVLLKDLYRAGFKGKILGFAYSINQKLIDQIGQPEVVEGVYT
                     FAPSPAEGSTAYEKVKAAVGSANPDPYTCQVYDHTNMVLMSMAFAKAATGEAIKDNIR
                     KVTQGGGKTVDNAVDGIKAIAAGDKVDYSGASGPCDFDARGDILDCKFRYEQIKAGKF
                     TLVKIA"
     gene            1278..2135
                     /locus_tag="VF991_06205"
     CDS             1278..2135
                     /locus_tag="VF991_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556068.1"
                     /translation="MIVLQALVNGLVSGTLLAVPAIGFTAMFAVLRFPNFSVSGVATL
                     GAFAGYLAYGAGLQMAGSLAVAFIVAGAAGLFFDKVAHLPLVKQGALPAAIASIATGL
                     VLENVVRLGFGNEPRGYDRSIARDIYLGEIRVSPQQLETMALALALMLAVFTALAFTR
                     IGKAMRASADNPELAALKGIRPERIAMMASFVGMGLVGVGGMLLGLDSSIDPLTGTRI
                     LLSLFAAAVLGGLGSAPGAVLGAFLIGMAEELSVLVVGSQYRAAVGFVAILLVLTLRP
                     RGLLGERAF"
     gene            2176..3093
                     /locus_tag="VF991_06210"
     CDS             2176..3093
                     /locus_tag="VF991_06210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556069.1"
                     /translation="MLSYLLFIATVGGIYGLLALSLNLIWGGAGMVNLGLAGFFAVGA
                     YASALLTTAGHAPIAAGWLLALLAGGLAGLIVTLSTTRLREDYLAIVTLGFAEVVRLM
                     AANEIWLTRGADGISGIPGPWKRALGQDFNAVYFLIVVGALMVVFFVVRRIDRAPYGR
                     ALRAIREDAQVAQVAGKSVLRFKTEAFALSAAIAGLAGALYGHFTSYIAPDLFLPLIT
                     VYIFLAVASGGTGRPAGALLGAYMVMTLLESSRFFVEWIPAVTAVQRAALKELLIALA
                     LIVVLRLKPSGMLPERIPPAPRPAPGGTS"
     gene            3090..>3293
                     /locus_tag="VF991_06215"
     CDS             3090..>3293
                     /locus_tag="VF991_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX9556070.1"
                     /translation="MTPFEACLAALRQPGPPESLFKVLDKALADTVGHKLFTLLYVAP
                     DGKRVKRLYTNMPKEYPVGGYKPV"
BASE COUNT          493 a         1113 c         1099 g          588 t
ORIGIN      
        1 gggacgtcat atgaaaagga ttcacatcgg ccgccgtgcc gcgctggcag gcggtgtcgc
       61 cgcctttgca agccccgccg tgctgcgggc gcaaagcgac ccgatcaagc tcgccaccct
      121 gacgccgctt accggcgcgg gcggttccta cgggccgacg atggccaagg tcgccgcctc
      181 ggtggtggaa gaggtcaaca aggcgggcgg cgtgctgggc aggcgggtcg tcctggtgag
      241 cgaggacgac cagaccagtc cggaggccgg cgtccgtgcc gcgcgaaaac ttatagacgt
      301 cgacaaggtc gccgccatca tgggcacctg ggcctcgtcg gtgaccacgg cggtggcgcc
      361 gctctgctgg gagagcaaga ccttcctgtg caccgtgtcg ggcgccgatt cgatcacgct
      421 gctgccgcac cagggcttcc tcgtccgcac gcagcccaat tccacgctgc aggtgacgcg
      481 ggtcggcgag ttcatcctgt cgctgggggc caagaaggtc ttcaccatga tcccgcagac
      541 gccgttcacc cagtcgacct tcgatattct gaacgccgtg ctgcccaagg gcggcgccac
      601 tcatcagagc ttgatttacg acgacaagaa gacgacctac cgcaccgagg tcgaccaggc
      661 gctgcgcacc agccccgacg tgatcctggc caacggctac acgcccgact cgatcgtgtt
      721 gttgaaggac ctctaccgcg cgggcttcaa gggcaagatc ctgggcttcg cctactcgat
      781 caaccagaag ctcatcgacc agatcggcca gccggaagtg gtcgagggcg tctacacctt
      841 cgcaccgtcg ccggccgagg gcagcacggc ctacgagaag gtcaaggccg cggtcggctc
      901 ggccaatccc gatccttaca cctgccaagt ctacgaccac accaacatgg tcctgatgag
      961 catggcgttc gccaaggcgg cgaccggtga ggcgatcaag gacaacatcc gcaaggtgac
     1021 gcagggcggt ggcaagactg tcgacaacgc cgtcgacggc atcaaggcga tcgcggcggg
     1081 ggacaaggtc gactactcgg gcgcgagcgg gccctgcgac ttcgacgcca ggggcgacat
     1141 cctcgactgc aaattccgct acgagcagat caaggccggc aagttcaccc tggtgaagat
     1201 cgcgtgatca tgcggaccgc gggcgtctcg cccgctcatg atcttgagcg ggcgagacgc
     1261 ccgcggtccg gaagaccatg atcgtcctcc aggcgctagt gaacggactg gtgtcgggca
     1321 ccttgctcgc ggtgcccgcc atcggcttca cggcaatgtt cgccgtgctg cgctttccca
     1381 acttctcggt gtcgggcgtg gccacgctcg gcgccttcgc gggctacctg gcctatggcg
     1441 cgggcctgca gatggcgggc tcgctggccg tggccttcat cgtggccggt gcggccggtc
     1501 ttttcttcga caaggtggcg cacctgccgc tggtcaagca gggcgcgctg ccggcggcca
     1561 tcgcctcgat cgccaccggg ctggtgctgg agaacgtcgt gcggctggga ttcggcaacg
     1621 agccgcgcgg ctacgaccgg tcgatcgcac gcgacattta cctgggcgag atccgcgtca
     1681 gcccgcagca gctcgagacc atggcgctgg cgctcgccct gatgctggcg gtgttcacgg
     1741 ccttggcctt cacccgcatc ggcaaggcca tgcgcgcctc ggccgacaat cccgagctgg
     1801 cggcgctcaa gggaatccgg cccgagagga tcgccatgat ggcgagcttc gtcggcatgg
     1861 gactggtcgg cgtcggcggc atgctgctgg gcctcgacag ctcgatcgat ccgctgaccg
     1921 gcacgcgcat tcttctgtcc ctgttcgccg ccgcggtgct gggcgggctg ggcagcgcgc
     1981 cgggtgccgt gctgggcgcc ttcctgatcg gcatggccga ggaactgtcg gtgctggtcg
     2041 tgggctcgca gtaccgcgcc gccgtggggt tcgttgccat cctgctggtg ctgacgctgc
     2101 gcccgcgcgg gcttttgggg gagagggcgt tttgatggcc gaatgtcagg acgacggcaa
     2161 atcgtctctc cagcgatgct gagctatctc ctcttcatcg ccaccgtagg cggcatctac
     2221 gggctcctgg cgctcagtct caacctgatc tggggcgggg cgggcatggt caatctcggc
     2281 ctggcgggct tcttcgccgt cggcgcctat gcctcggcgc tcttgaccac ggcgggccac
     2341 gcgccgatcg ccgctggctg gctgctggcg ctgctcgccg gcgggttggc cggattgatc
     2401 gtcacgctct cgaccacgcg gctgcgcgag gattatctcg ccatcgtcac cttgggtttc
     2461 gccgaagtgg tgcggctgat ggccgccaac gagatctggc tgacgcgcgg cgccgacggc
     2521 atctcgggca ttcccggccc atggaagcgg gcgctcggcc aggacttcaa cgcggtctat
     2581 ttcctgatcg tggttggtgc actcatggtc gtgttcttcg tcgtgcgccg tatcgaccgc
     2641 gcgccctacg gccgcgcctt gcgcgccatc cgcgaggacg cccaggtggc gcaggtcgcg
     2701 ggcaaatcgg tgctgcgctt caagaccgag gccttcgcgc tgtcggctgc catcgccggg
     2761 ctggccggcg cgctctacgg ccatttcacc tcgtacatcg cgcctgacct cttcctgcca
     2821 ttgatcacgg tctacatctt cctggccgtg gcctcgggcg gcacgggccg gccggcgggc
     2881 gccttgctcg gcgcctacat ggtgatgacg ctcttggaat cctcgcgctt cttcgtcgag
     2941 tggattcccg ccgtgacggc ggtccaacgt gccgcgctca aggaactgtt gatcgcgctc
     3001 gcccttatcg tggtgctccg gctgaaaccc tcgggcatgt tgcccgagcg catcccgccc
     3061 gcgccacgtc ccgctccagg aggaacatca tgacgccttt cgaggcctgc cttgccgcgc
     3121 tccgccagcc cggtccgccc gagtctctgt tcaaggtgct cgacaaggcg ctggccgaca
     3181 cggtgggcca caagctcttc acgctgcttt acgtggcgcc ggacggcaaa cgcgtgaagc
     3241 ggctctacac caacatgccc aaggaatatc cggtcggcgg ctacaagccg gtg
//
LOCUS       DASWGA010000256         2607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1419798, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000256 DASWGA010000000
VERSION     DASWGA010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1419798"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1057
                     /locus_tag="VF991_06220"
     CDS             <1..1057
                     /locus_tag="VF991_06220"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEX9556071.1"
                     /translation="SAGAFWYPASLTKMMTIYVVFEELKTGRITLSTPLPFSEHARSM
                     PPSKLGLPPGQTITVEQGLLALVARSANDVAAAFGELISGSTPAFAQRMTETAARIGM
                     NATQFRNAHGLPDQGQITTARDMAILAMALAKEFPQYYGYFHTQEFMLGKMRVGPGIK
                     FLDLYAPYADGLKTGFICASGFNIVGSAVRDGRRLIAVAFGFRRADLRDEFIIRLLDE
                     AYLLKTGGSRPKVWQLRNGAGGPGTVFAPGECGAIHYDMPGDAVWLGTYGDWKTARVA
                     FDTGQADLARLGVTRLGKEYILPVTSNKVTKQAAIIADLEPGAAQRICADYGQRKLFC
                     QVKKPEEFVPPFGVFWR"
     gene            1131..2021
                     /gene="accD"
                     /locus_tag="VF991_06225"
     CDS             1131..2021
                     /gene="accD"
                     /locus_tag="VF991_06225"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HEX9556072.1"
                     /translation="MNWLTNFVRPKLRALVSRKEAPDNLWLKCVKCEQMLFMRDWEAN
                     QEVCTHCGHHMRIAPLKRLPYLFDEGKYELHPLPRVTVDPLKFRDTKRYDARLKEAQA
                     KAEGTTDALVVASGLMGGRMTMMALLDFGFMGGSMGTAVGEGLVMASDLAVARKAPLI
                     VFSASGGARMQEGILSLIQLTRTTIAVRKVKEAGLPYIVVLTDPTTGGVSASFAMLGD
                     VHIAEPDAIIGFAGPRVIQDTIRQELPPGFQRSEYLLEHGMVDAVVHRHKLRETLIRL
                     VSLFMDPVTSESRGLAVAAG"
     gene            2044..>2607
                     /locus_tag="VF991_06230"
     CDS             2044..>2607
                     /locus_tag="VF991_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX9556073.1"
                     /translation="MIDPLLERLTRLHPKLIDFELGRTERLLAAVGSPHLKLPPVVHV
                     AGTNGKGSLVAYLRAMAEAAGYRVHVYTSPHLVRFNERIRVAGRLIEDDALDAILTEC
                     EAANQEKPITFFEITTAAAYLAFSRVPADLAVIEVGLGGRYDATNVIDPVLSAITPIG
                     YDHTGFLGDRLEGIAAEKAGILKHAVPG"
BASE COUNT          426 a          904 c          827 g          450 t
ORIGIN      
        1 tagcgccggc gcgttctggt atcccgcctc gctcaccaag atgatgacca tctacgtcgt
       61 cttcgaggag ctgaagaccg gccgcatcac gctgtccacc ccgctgccgt tttccgagca
      121 tgcccgctcg atgccgccgt ccaagctcgg cctgcccccc ggccagacca tcacggtgga
      181 gcagggactg ttggcgctgg tcgcgcgctc ggccaacgac gtcgcggcgg cgttcggcga
      241 gttgatctcg ggctcgacgc ccgccttcgc ccagcgcatg accgagacgg cggcacgcat
      301 cggcatgaac gccacgcaat tccgcaacgc ccacggcctg cccgaccagg gccagatcac
      361 cacggcgcgc gacatggcga ttctcgccat ggcgctggcg aaggaatttc cgcagtacta
      421 tggctacttc cacacccagg aattcatgct cggcaagatg cgggtcgggc cgggcataaa
      481 attcctcgat ctctatgcgc cctatgccga cggcctgaag accggcttca tctgcgcctc
      541 cggcttcaac atcgtcggca gcgcggtgcg cgacggccgg cggttgatcg ccgtcgcgtt
      601 cggtttccgc cgtgccgatc tgcgcgacga attcatcatc cgcctgctcg acgaagccta
      661 tctgctgaag accggcggca gccggcccaa ggtctggcag ttgcgcaacg gcgcgggcgg
      721 gccggggacg gtgttcgcgc caggcgagtg cggcgcgatc cactacgaca tgcccggaga
      781 tgccgtctgg ctcggcacct acggcgactg gaagacggcg cgagttgctt tcgacaccgg
      841 ccaggccgac ctcgcccggc tcggcgtcac gcggctcggc aaggagtaca tcctgccggt
      901 cacgtccaac aaggtgacca aacaggccgc catcatcgcc gacctcgaac ccggcgccgc
      961 gcagagaatt tgcgccgact acgggcagcg aaaattgttc tgccaagtga agaaacccga
     1021 ggagttcgtg ccgccgttcg gcgtcttctg gcgctgaagt tttagccgcc gaggcgtcga
     1081 gcgtccggcg ctgtcttggc cggctcggtc tttcatgcga taccgccgcc atgaactggc
     1141 tgaccaattt cgtccggccc aagctcaggg cgctggtctc gcgcaaggag gcgcccgaca
     1201 atctctggct gaagtgcgtc aagtgcgaac agatgctgtt catgcgcgac tgggaggcca
     1261 accaggaagt ctgcacccat tgcggccacc acatgcggat cgctccgcta aagcgcctgc
     1321 cctacctttt cgacgagggc aaatacgagc ttcatccgct gccccgcgtc accgtcgatc
     1381 cgctgaagtt ccgcgacacc aagcgctacg atgcgcgcct gaaggaagcc caggccaagg
     1441 ccgagggcac gaccgatgcg ctggtggtgg cgagcggcct gatgggcggt cgcatgacca
     1501 tgatggcgct gctcgatttc ggcttcatgg gcggctcgat gggcaccgcc gtgggcgagg
     1561 gcctggtgat ggcgtccgac ctcgccgtgg cgcgcaaggc gccgctgatc gtcttctccg
     1621 cctcgggcgg ggcgcgcatg caggagggca tcctgtcgct gatccagctc acccgcacca
     1681 ccatcgccgt gcgcaaggtg aaggaggcgg gcctgcctta catcgtcgtg ctgaccgatc
     1741 ccacgacggg cggcgtatcg gcgtcgttcg ccatgctggg cgacgtgcac atcgccgagc
     1801 ctgacgccat catcggcttc gccggcccgc gtgtcatcca ggacacgatc cgccaggaac
     1861 tgccgcccgg cttccagcgc tcggaatatc tactcgagca cggcatggtc gatgccgtcg
     1921 tgcaccgcca taagctgcgc gagacgctga tccgactggt ctcgctgttc atggatcccg
     1981 ttacctccga aagccgcggc ctcgctgtcg cggccggttg agctcattgc catggcgccg
     2041 gccatgatcg atccgctgct cgaacgcctg acgcggctgc atcccaagct gatcgacttt
     2101 gagttggggc gcaccgagcg cctcctggcc gctgtcggat cgccgcatct gaagctgccg
     2161 ccggtggtcc atgtcgccgg caccaacggc aagggctcgc tggtcgccta cctgcgcgcc
     2221 atggccgagg cggcgggcta tcgcgtgcac gtctatacct cgccccatct cgtgcgcttc
     2281 aacgagcgca tccgtgttgc cggtcggctg atcgaggatg acgcgctcga cgccatcctg
     2341 acggagtgcg aagcggccaa ccaggaaaag cccatcacct tcttcgagat caccacggcc
     2401 gcggcttatc ttgccttctc gcgcgtgccg gccgatctgg cggtgatcga ggttggcctg
     2461 ggtggccgct acgatgccac caacgtgatc gatcccgtgc tctcggccat cacgccgatc
     2521 ggctacgacc acacgggctt cctcggcgac aggctcgagg gcatcgccgc ggagaaggcc
     2581 ggaatcctca agcacgccgt gccgggc
//
LOCUS       DASWGA010000257         4667 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2175896, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000257 DASWGA010000000
VERSION     DASWGA010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4667
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2175896"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..261
                     /locus_tag="VF991_06235"
     CDS             <1..261
                     /locus_tag="VF991_06235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrin-III methyltransferase"
                     /protein_id="HEX9556074.1"
                     /translation="GQPLILYMPMAQLAEIAASLEQGGLSADTPAALIQSATTAGERV
                     VESWLGSLAADAAKHAIGSPSIVVIGAIADLRRQLLSSLVPW"
     gene            258..1592
                     /locus_tag="VF991_06240"
                     /pseudo
     CDS             258..1592
                     /locus_tag="VF991_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610631.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0042242 - cobyrinic acid a,c-diamide
                     synthase activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
     gene            1589..2224
                     /gene="bluB"
                     /locus_tag="VF991_06245"
     CDS             1589..2224
                     /gene="bluB"
                     /locus_tag="VF991_06245"
                     /EC_number="1.13.11.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016722 - oxidoreductase activity, acting
                     on metal ions [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0032363 - FMN catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5,6-dimethylbenzimidazole synthase"
                     /protein_id="HEX9556075.1"
                     /translation="MSPTFDAEFRAQFRELVLWRRDVRRFRSDPIARERIDALLELAS
                     HAPSVGRSQPWRFVYVDSADRRLAVVKSFTDANARALAGYSGEKHEIYAGLKLAGLKE
                     APVHLAVFSDDATHTGSGLGQQTMPETLHYSVVAAIQTLWLAARADGIGMGWVSILDP
                     KAVTRVLDVPSTWSLVAYLCLGLPAEEHLDPELERHHWEVRTDLKEVVFTR"
     gene            2269..3306
                     /locus_tag="VF991_06250"
     CDS             2269..3306
                     /locus_tag="VF991_06250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007690483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative FMN-dependent luciferase-like
                     monooxygenase"
                     /protein_id="HEX9556076.1"
                     /translation="MTTAPSPKRLGFFTRLLDQTDAAERYRLATQQIVHAERCGFDSA
                     WIAQHHFHEGEGGLPAPFVFLSQAAVQTSRIRLGTGIVTLPLELPVRVAEDAVVTDLI
                     SGGRLEVGVGPGGNLTAFTAFGLDSNDRHTLMDRNLELLRTAWSGGALPGGDKLYPSS
                     PTLVDRIWQATFSVVGARRAGAAGDGLMLSRTQPRPPDAPNALLADIQNPMIDAYLEA
                     LPKGRAPRILASRTVFVADDRKEAMRLAEIGLVRLRHRLAATGDLSSGDLIGDLIAAF
                     DVHIGTPDEVIASLQADATLARATDLTVQIHSIDPPHPFILRSIELVAETVAPALGWV
                     PSTAAGKRRVA"
     gene            3306..3899
                     /locus_tag="VF991_06255"
     CDS             3306..3899
                     /locus_tag="VF991_06255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015918317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMD domain protein"
                     /protein_id="HEX9556077.1"
                     /translation="MTDVINTLAAIAPGSSLDAIRNMRPQARLQAQASYDSLFAPVSE
                     ADATRLERFAIACFVAGLHEQPQIAAFYGKGLVPADAPAMLQAAIGAAVAIAKVEGPY
                     GRYPKGPLSIEDQTGPVHRIAAPTREVLGPRLAAAFEHAHMLVFHPRDSAPSYLQALI
                     DAGWSTTGIVVISQLVAFLSYQIRVVAGLRVLNARPA"
     gene            3896..4507
                     /locus_tag="VF991_06260"
     CDS             3896..4507
                     /locus_tag="VF991_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkylhydroperoxidase domain protein"
                     /protein_id="HEX9556078.1"
                     /translation="MTDKVLSPTDHVEPVVFTRDQLDWLPWLEPMAEHDLTARHMAGL
                     VDAARAKSPYFRLLVRDPEVLEARTRTDKDIFYNPEAGLPRAERELAAAATSRFNGCI
                     YCASVHARFAATYSKRAQDVDRLLADGVVADLDGRWNAIVAAAVALTATPVAFGPEHV
                     DALRKVGLDDASIVDVINAASFFNWANRLMLSLGEPAAPPAKA"
BASE COUNT          677 a         1646 c         1554 g          790 t
ORIGIN      
        1 ggacagccgc tcatcctcta catgccgatg gcgcagttgg cggagatagc ggcttcgctg
       61 gagcagggcg gcctgtcagc cgacacgcct gccgctctca tccagtcggc gacgacggcc
      121 ggggagcggg tagtcgaaag ctggttgggc tcgcttgccg ccgatgcggc caagcacgcc
      181 attggttcgc cttccatcgt cgtgatcggc gccatcgccg acctgcgccg gcagctcctg
      241 tcgtcgctgg tgccgtggtg acggccgaag cgatcggccc gcgcgggctc gtgctggcgg
      301 ctgcccattc cggcgccggc aagaccacgg tcacggtcgg gctgctgcgg gcactcgccc
      361 gtcgcgggct tgccgtgcag cctttcaaat gcgggccgga ctatatcgat ccggccttcc
      421 atgcgatcgc ggccggccgg ccgagctaca acctcgacac ctgggcgatg acatccgcca
      481 cgctcgccga tcttctaacc cgccacgccg caacggctga cctcgcgatc gtcgagggcg
      541 tcatgggcct gttcgacggc gtggccgagc ccggccagac cgcgcgcggc tcgaccgccg
      601 acctggcggc gctgctcggc tggccggtcg tgctggtgct cgatgtcgcg ggtcagaccg
      661 agacggctgc tgcggtagcg gccggttgcg cgcgataccg cgacgatgtt tcgatcgccg
      721 gggtgatcct gaaccgcgtg gcgagtccac gtcacgccgc gttgatcgcg cctgggttcg
      781 agcgcatcgg cattccgttg ttcggcgcga tcattcaaga cgcgcacctc accctgccgg
      841 agaggcatct cggtcttgtc caggccggct agacggccga tatcgaccat cgcctcgacg
      901 cactcgccga catgatcgaa gcctcgatcg acctcgatgc cgtccgccgt agcgcgcgga
      961 gcactgcctt cgcaggcggc gttgcgccga acctcgatcc ccccggccag cgtatcgcgc
     1021 tcgcccggga tcgcgctttc tccttcatgt atccgcacct gctcgatcgc tggcgcacgg
     1081 ccggcgcgga gattctggcc ttctcgccgc tggccgacca ggcgcccgat cccgctgccg
     1141 atgcggtgtg gctgcccggc ggctaccccg agctccatgc cggaacactg gccatggccc
     1201 atcgtttcca cgacgggcta agggtgctgg ccggccgctc tgttcccatc catggcgaat
     1261 gcgggggcta tatggtgctg ggccagggga tcgaggatgc ggcgggcgat cgccacgcga
     1321 tgacgggcct gctgcggctc gaaacatctt tcgccaagcg cagcctgcat ctcggctacc
     1381 gtctcgcgcg gctgaaagcc ccctgcgcgc tgggggcggc gggcacggaa gtctttggcc
     1441 atgagttcca ctatgccagc gcactctcgt gcgacgacga gccgttggtc gactgccgcg
     1501 atgcgactgg cgcgccggtg gccgaaggcg gcgggcggcg cggctcggtg agcggcacgt
     1561 tctttcattt catcgacagg cgacagacat gagcccgacg ttcgacgctg aattccgcgc
     1621 gcaattccgc gagctggtgc tgtggcgccg cgatgtgcgg cgctttcgca gcgatcccat
     1681 cgcgcgcgag cgaatcgatg cgctgctcga actcgcgagc cacgcgccat cggtgggacg
     1741 aagccagccc tggcgtttcg tctatgtcga ctcggccgat cgacggcttg ccgtcgtcaa
     1801 aagcttcacc gatgccaacg cgcgggcgct ggctggctat tccggcgaaa agcatgagat
     1861 ctatgccggg ctgaagctcg ccgggctcaa ggaggcgccg gtccatctcg ccgtgttctc
     1921 cgacgacgcc acccacaccg gcagcggtct cggtcagcag accatgccgg aaaccctgca
     1981 ctactcggtg gtggccgcca tccagacgct gtggctggcc gcccgcgccg acggcatcgg
     2041 catgggctgg gtctcgatcc tcgatcccaa ggcggtgacg cgcgtgctcg acgtgccatc
     2101 gacctggagc ctcgtcgctt atctgtgcct cggcctgccg gcggaggagc atctcgaccc
     2161 ggagctcgaa cgccatcact gggaagtccg caccgacctc aaggaggtcg tgttcacgcg
     2221 ttagccacgc tcttgcatcg gcccgatttc tccatacaag gttggacaat gacgaccgca
     2281 ccatcgccca agcgcctggg cttcttcaca cgcctgctcg accagaccga cgccgccgag
     2341 cgctaccggc tggccactca gcagatcgtg catgccgagc gttgcggctt cgactcggcg
     2401 tggatcgccc agcatcattt ccacgagggc gagggcggct tgcccgcgcc gttcgtgttc
     2461 ctgtcgcagg cggccgtgca gacctcgcgc atccgcctcg gaaccggcat cgtgaccctg
     2521 ccgctggaac tgccggtgcg cgtggccgag gacgccgtcg tgaccgacct gatatcgggc
     2581 ggccgcctcg aagtcggcgt cggaccgggt ggcaatctca cggcgttcac cgcgttcggc
     2641 ctcgacagca acgaccgcca cacgctgatg gaccgcaatc tcgagctgct gcgtacggcg
     2701 tggtcgggcg gcgcactgcc gggcggcgac aagctctatc cctcaagtcc cacgctggtc
     2761 gaccgcatct ggcaggcgac cttctcggtg gtgggcgcgc gccgcgccgg cgccgccggc
     2821 gacgggctga tgctgtcgcg cacccagccg cgcccgcccg acgcgcccaa tgccttgctg
     2881 gccgacatcc agaacccgat gatcgacgcc tatctagaag ctctgcccaa ggggcgcgcg
     2941 cccaggatcc ttgcctcgcg cacggtcttc gtcgccgacg atcgcaagga ggcgatgcgg
     3001 ctcgcggaaa tcggcctggt ccggctgcgc caccggctcg cggcgaccgg cgatctgtcg
     3061 tcgggcgact tgatcggcga tcttatagcg gcgttcgacg tccatatcgg cacgcccgac
     3121 gaggtgatcg cttcgctgca ggccgatgcg acgctggccc gcgccaccga cctcaccgtg
     3181 cagatccatt cgatcgaccc gccgcatccg ttcatcctgc gctcgatcga gctggtggcc
     3241 gaaacagtgg cgccggcgct gggctgggtg ccaagtacgg cggccggcaa gcggcgggtg
     3301 gcctgatgac cgatgtgatc aacacgctgg cggccatcgc cccgggatcg tcgctcgatg
     3361 ccatccggaa catgcgcccg caggcccgcc tgcaggcgca ggccagctac gattcgctgt
     3421 tcgcgccggt gagcgaggcc gatgccacca ggctcgagcg ctttgccatc gcctgcttcg
     3481 ttgccggcct gcacgagcag ccgcagatcg ccgccttcta tggcaagggc ctcgtccccg
     3541 cagacgcgcc ggcaatgtta caggctgcca tcggcgccgc cgtcgcgatc gccaaggtcg
     3601 agggccccta tggccgctat ccgaaggggc cgctcagcat cgaagaccag accggaccgg
     3661 tccatcgcat cgccgcgccg acgcgcgagg tgctggggcc gaggctcgcg gcagccttcg
     3721 agcatgccca catgctggtg ttccatccgc gcgattcggc gccgagctat ctgcaggcgc
     3781 tgatcgatgc cggctggtcg accaccggca tcgtcgtgat ctcccagctc gtcgcctttt
     3841 tgtcctatca gatcagggtg gtcgccgggt tgcgcgtcct gaatgcgagg cccgcatgac
     3901 cgacaaggtt ctgtcgccaa ccgaccatgt cgagcccgtg gtcttcaccc gcgaccagct
     3961 cgattggctg ccctggctcg agccgatggc ggagcacgat ctgaccgctc gtcacatggc
     4021 cggcctggtc gatgccgcgc gcgccaagtc gccctatttc cggctgctgg tgcgcgatcc
     4081 cgaggtgctc gaggcgcgca cgcggaccga caaggatatc ttctacaatc cggaggccgg
     4141 cctgccgcgc gccgagcgcg agcttgccgc cgcggcgacc tcgcgcttca acggctgcat
     4201 ctactgcgcc tcggtgcatg cgcggtttgc ggcgacctat tccaagcggg cccaggacgt
     4261 cgatcgcctg ctggccgacg gcgtggtggc cgatctcgat gggcgctgga atgccatcgt
     4321 cgcggccgcg gtggcgctca ccgcgacgcc tgtcgccttc gggcccgagc acgtcgacgc
     4381 cctgcgcaag gtcgggcttg acgatgcgtc gatcgtcgac gtcatcaatg ccgcgtcgtt
     4441 cttcaattgg gcgaacaggt tgatgctgtc gctcggcgaa ccggccgcgc cgcccgccaa
     4501 ggcctgagct ggcgcttcag accaggcgca agtcggcgtg ctggtgggaa tagcgccggc
     4561 cggccggggg caacctcggc ggacttttcg cgtttccatc aaacggcggg cagcccagcg
     4621 gagaaagcga tgactattgc gcgcaggaag gccgcgcatg ccaagcg
//
LOCUS       DASWGA010000258         5745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_658732, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000258 DASWGA010000000
VERSION     DASWGA010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5745
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_658732"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VF991_06265"
     CDS             <1..432
                     /locus_tag="VF991_06265"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX9556079.1"
                     /translation="DRAGSMMIEFALALPLIFLLLVGLLDLSRFALAKSAMLQGARAG
                     VQYGLIAYSESANINSTAQTATGLSGVTATNTVFCECVTGTAVVCTTTCLTGQTRKRY
                     LRVTTTKSFTSVLTTATTNFGSFGSWTPPTSVSASVTLIVP"
     gene            434..850
                     /locus_tag="VF991_06270"
     CDS             434..850
                     /locus_tag="VF991_06270"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX9556080.1"
                     /translation="MRALLTRLAADRLGAAILEFAILAPVLFAVVLGGIDFGYMFYVR
                     GGLEYATEEAARYYMLNPSTVTSTQVTTYLRGKMPGGMGPNVSVSYADTASCNGNGNV
                     TCTTITATYAFAFAGYAPLGATTLRATAQAVRLLGP"
     gene            960..1766
                     /locus_tag="VF991_06275"
     CDS             960..1766
                     /locus_tag="VF991_06275"
                     /inference="COORDINATES: protein motif:HMM:NF016611.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9556081.1"
                     /translation="MKLAPILNAGLALVVAACGADVGGASGDSYDTSVKQADEARKAG
                     DLDAAMPLYGRALQAKPDGIEAKLGLGQVYLSAGAPDEAAALFRDVLDKKASDQTARR
                     GLALALISMGQPDLAERQLEAALLADGRDYRTLNAYGVVLDMQGRHAEAQARYIQGIE
                     LAPDYLPLRNNFGLSLAISGQPEEAIAQLTPLATSRGADGRVRQNLALAYAMNGDLEN
                     CLLVSRKDLSEQSAQRQLQYFMQLRSLPVEARSAELRRNPSFFPQAGGGG"
     gene            1900..2364
                     /locus_tag="VF991_06280"
     CDS             1900..2364
                     /locus_tag="VF991_06280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556082.1"
                     /translation="MPGVPEFRDPKTGQIWTPLNVGQQSGPPTPADVAFDPLGQAVRV
                     EGVVVQRPSIVPLAAVPITAGPTVPIVNIGGATLRAVAGKRWQVVLYLDNNSANTVVP
                     LINCRFTNAGKLVEQTHVLVPAVGPGTRVGMIVHGPKTDLFVDRASCAVTSP"
     gene            complement(2371..3135)
                     /locus_tag="VF991_06285"
     CDS             complement(2371..3135)
                     /locus_tag="VF991_06285"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX9556083.1"
                     /translation="MELFDLSGRVAVVTGGNGGIGLGMALGMARAGAAIVVAGRDAAK
                     SKAAVKEIESVGAKASAIPVDVLKEDSCRALIADTVKAHGRLDILVNNAGMSIRKQPE
                     QYTLADWHTVLDSNLTSAFLCSHAAYPEMKKGGAGKIINIGSMMSIFGAPFATAYAAS
                     KGGMVQMTKSMATAWAKDNIQVNAILPGWIDTALTRRAREQITGLHDSVLKRTPAGRW
                     GVPDDFAGIAVFLAAAASDFVTGAAITVDGGYSVQG"
     gene            3249..3380
                     /locus_tag="VF991_06290"
     CDS             3249..3380
                     /locus_tag="VF991_06290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556084.1"
                     /translation="MVMEVMVFGLALVAGACASHGIARGTAQYDRCVQNEFAARRPG"
     gene            complement(3437..3712)
                     /locus_tag="VF991_06295"
     CDS             complement(3437..3712)
                     /locus_tag="VF991_06295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556085.1"
                     /translation="MLASEDKKKALTSPSGVFKTPDEVIACKDLSKDEKAAILKQWEL
                     DARLLQVASEEGMSEGEGSLFADVKKAQSKLDVEVLEEDGAPTKAGP"
     gene            complement(3775..4008)
                     /locus_tag="VF991_06300"
     CDS             complement(3775..4008)
                     /locus_tag="VF991_06300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556086.1"
                     /translation="MAGNDKRRATGDPSRARTKASAERPFDIWLQKQLHAMYDEIASE
                     PLPNDLLGLIDRDAAKAGRKRDEAAKGSAGRKK"
     gene            complement(4138..4728)
                     /locus_tag="VF991_06305"
     CDS             complement(4138..4728)
                     /locus_tag="VF991_06305"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9556087.1"
                     /translation="MAAESRNDVHDFHEQLKAILPRLRIYALSLTRDRDAADDLVHDT
                     VIKALTGRHSFQPGTNLAAWLFRIQRNEFISGLRRQRPSVPVDTAIAESLSHPAHQDS
                     GLIMREFVTAFAKLVPTQREALLLAVLEGLPYEVIAAHTDVSVGTVKSRISRARDTLE
                     RLLLEGEARPQPAAGVDTTGADDRSAEAGDAPATES"
     gene            complement(4826..5275)
                     /locus_tag="VF991_06310"
     CDS             complement(4826..5275)
                     /locus_tag="VF991_06310"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9556088.1"
                     /translation="MALLPDLRAFSRFLCREREAADDLVQNTILAALDKQAQFAPGTN
                     LKGWLFTIMRNRFYSDLRTQRRRPTSINDEAAAPLAAVDNPEATLALKELSSVLWELS
                     PQAREALVLVGAGGFSYEEAAALCRCSVGTLKARVSRARKQLAAKLS"
     gene            5464..5661
                     /locus_tag="VF991_06315"
     CDS             5464..5661
                     /locus_tag="VF991_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEX9556089.1"
                     /translation="MNWDRIEGNWKQLTGKVKEQWGKLTEDDLTVIGGKQDQLVGRIQ
                     ERYGIAKDEAERQVNSWANRI"
BASE COUNT          952 a         1897 c         1886 g         1010 t
ORIGIN      
        1 gaccgcgccg gcagcatgat gatcgagttc gcactggcct tgccgcttat cttcctgctg
       61 ctggtcggcc tgctcgatct cagccgtttc gcgctggcca aatcggcgat gctgcagggc
      121 gcccgggcgg gcgtgcagta cggcctcatc gcctattcgg aatcggccaa cataaactcg
      181 acggcgcaga cggccaccgg cctcagcggc gtcacggcca ccaacacggt gttctgcgaa
      241 tgcgtgaccg gcacggcagt ggtgtgcacc acgacctgtc tcaccggcca gacacgcaaa
      301 cgttacctga gggtcaccac gaccaagtcg ttcacctcgg tgctgacgac cgcgacaacc
      361 aacttcggca gcttcggaag ctggacgccg ccgacatcgg tctcggcgtc ggtgaccttg
      421 atcgttccct gacatgcgcg cgctcttgac gcgcctggca gccgatcggc tgggcgccgc
      481 gatcctcgaa ttcgcgatcc tggcgccggt gctgttcgcc gtggtgctgg gcggcatcga
      541 cttcggctac atgttctatg tccgaggcgg cctggaatat gccaccgagg aggcggcgcg
      601 ttactacatg ctcaatccca gcacggtgac gtcgacgcag gtcaccacgt acctgcgcgg
      661 caagatgccg ggcggcatgg gcccgaacgt cagcgtctcc tatgccgaca ccgcgagctg
      721 caatggcaac ggcaacgtga cctgcaccac gatcaccgcc acctacgcct tcgccttcgc
      781 cggctacgcg cctctgggcg ccacgacgct gcgcgccacg gcccaagccg tccggctgct
      841 aggcccatga tttcaaggag ttgtccccaa ctattggggc tttggttgcg gttgacccca
      901 agactttgat atcctgaccg cgcagttccg cagcagcgga ccgcgtattc ggggtttgaa
      961 tgaagctggc gccgatcttg aatgcgggcc tggcgcttgt cgtggcggcc tgcggcgccg
     1021 atgtcggagg ggccagcggc gacagctacg acacgtcggt caagcaggcc gacgaggcgc
     1081 gcaaagccgg cgacctcgat gccgcgatgc cgctctacgg ccgcgccttg caggccaagc
     1141 ccgacggcat cgaggccaag ctcggcctgg gccaggtcta cctgtccgcc ggggcgcccg
     1201 atgaagccgc cgcgctgttc cgcgacgtgc tcgacaagaa ggcgagcgac cagacggcgc
     1261 ggcgtggcct ggccttggcg ctgatctcga tgggccagcc cgacctggcg gagcgccagc
     1321 tcgaggcggc gctgctggcc gacgggcgcg attaccgcac gctcaatgcc tatggcgttg
     1381 tgctcgacat gcagggccgc catgccgagg cccaggctcg ctatatccaa ggcatcgagc
     1441 tggcgccgga ttatctgccg ctgcgcaaca acttcggcct gtcgctggcg atttccgggc
     1501 agccggagga ggcgatcgcc cagctcacgc cgctggccac cagtcgcggc gccgacggcc
     1561 gggtccgcca aaacctcgcc ttggcctacg ccatgaacgg cgacctggag aattgcctgc
     1621 tggtcagccg caaagacctc agtgaacaaa gcgcccagcg ccagctccag tacttcatgc
     1681 agctcaggag cctgccggtc gaggcgcgca gcgccgagtt gcggcgcaat ccaagtttct
     1741 tcccgcaagc cggcggtggc ggctagtctc gagagcggag gggaatccat gcagctttgc
     1801 caggacaagg tagtggggat cttggcttgc gtcgtcggcc tgaccgttgc gatggcggct
     1861 ctcgctcagg cgccgcgcag cagcctcgag gtgccggcaa tgcccggggt tccggaattc
     1921 cgcgatccca agaccggcca gatctggacg ccgctcaatg tcggccagca gagcggccca
     1981 cccacgccgg ctgacgtcgc gttcgatccg ttgggccagg cggtccgcgt cgaaggcgtt
     2041 gtcgtgcagc ggccgagcat cgtgccactg gcagccgtgc cgatcaccgc gggccccacc
     2101 gttcccatcg tcaacatcgg cggcgctacg cttcgggcgg tcgccggcaa gcgctggcag
     2161 gtcgtgctct atctcgacaa caacagcgcc aacaccgtgg tgccgttgat caactgccgt
     2221 ttcaccaatg ccggcaagct ggtcgagcag acgcacgtgc tggtgcccgc ggttggtccc
     2281 ggcacccgcg tcggtatgat cgttcacggg cccaagaccg accttttcgt cgatcgcgcc
     2341 agctgtgcag tgacctcgcc ctagcaaatc ctaaccctgg accgaatagc cgccatcgac
     2401 cgtgatggcg gcgccggtca cgaagtcgga cgccgcggca gccaggaaca cggcgatgcc
     2461 ggcgaagtcg tcgggcacgc cccagcggcc agccggcgtg cgcttcagca ccgagtcgtg
     2521 caggcccgtg atctgctcgc gcgcgcggcg ggtcagcgcc gtgtcgatcc agcccggcag
     2581 gatggcgttg acctggatgt tgtccttggc ccaggcggtc gccatcgact tggtcatctg
     2641 gaccatgccg cccttgctcg cggcataggc ggtggcgaag ggcgcgccga agatcgacat
     2701 catcgagccg atgttgatga tcttgccggc gccgcctttc ttcatctcgg gataggcggc
     2761 gtggctgcac aggaaggcgc tggtcaggtt gctgtcgagc accgtgtgcc agtcggcgag
     2821 cgtgtactgc tcgggctgct tgcgaatgct catgccggca ttgttgacca ggatgtcgag
     2881 ccggccgtgc gccttcaccg tgtcggcgat cagcgcccgg caggagtcct ccttcagcac
     2941 gtcgaccgga atggcgctcg ccttggcgcc gacgctctcg atctccttga ccgccgcttt
     3001 gctcttggcg gcgtcgcggc ccgccaccac gatcgccgcg ccggctcgcg ccatgcccag
     3061 cgccatgccg agcccgatgc cgccattgcc gccggtgacg accgcgacgc ggccggacag
     3121 atcgaaaagc tccatgcccg tttctcccct tgcgtggtcg gtctgtatag cgaacgcagg
     3181 gaacccgaaa cagcaaggac cgttacctcg cacgaggcag gcgcgcagcg ctcgtccgaa
     3241 gattgggcat ggtgatggag gtcatggtgt tcggcttggc gctcgtcgct ggcgcctgcg
     3301 ccagccacgg tattgcccga ggtacggctc agtacgatcg ctgtgtccag aacgagttcg
     3361 ccgcgcgccg gccgggctga ccggtggatg gcgaatgagg gtggcggcgg cctgagggcc
     3421 gccgccattt cattgtctag ggcccggcct tggttggtgc tccgtcctcc tcgaggacct
     3481 cgacgtcgag cttgctctgc gccttcttga cgtcggcaaa caggctgcct tcgccctcgc
     3541 tcatgccctc ctcgctggcg acctgaagga gccgggcgtc gagctcccat tgcttgagga
     3601 tcgccgcctt ctcgtccttg ctgaggtcct tgcaggcaat gacctcgtca ggcgttttga
     3661 acacgccgct gggactggtc agcgctttct ttttgtcttc gctggctagc atggtgggac
     3721 ctccatccgg gtgcaaccag ataacggccg cgcacctggc gaagttgccc ggggctattt
     3781 cttcctgccg gcgctgccct tggccgcctc gtctcttttg cgaccggctt tggcggcatc
     3841 gcgatcgatc aggccgagca gatcgttagg cagcggttcg ctcgcgatct cgtcgtacat
     3901 cgcgtgcaac tgcttctgca gccagatgtc gaaaggacgc tcggcagacg ccttcgtccg
     3961 cgcccgggac ggatcgccgg tcgcgcgccg tttgtcgtta ccggccatca tgtacccgcc
     4021 cgagaacggg agccgttcct cgggatcgcg cctgagccat tgatgtctcc cccaggaact
     4081 attcatgact gtaccacacc actacgcctc tcttgtacgc cctcttgaaa agggcgttca
     4141 ggactctgtt gccggcgcgt cgccggcctc agccgagcga tcgtccgcgc cggttgtgtc
     4201 gacgccggcg gccggttgcg gccgggcctc gccttcaagc agcagacgtt ccagcgtgtc
     4261 gcgtgcgcgc gagatgcggc tcttcaccgt gcccaccgac acgtcagtgt gcgcggcgat
     4321 gacctcgtaa ggcaggcctt cgaggacggc cagcagcagg gcctcgcgct gtgtcggcac
     4381 caacttggcg aacgcggtca cgaattcgcg catgatcaag ccgctgtcct ggtgcgccgg
     4441 atgcgacagc gactcggcga tcgcggtgtc gaccggcacg ctcggccgct ggcgacgcag
     4501 gccggaaatg aactcgttgc gctggatgcg gaaaagccag gccgcgagat tggtgcccgg
     4561 ctggaagctg tgccgaccgg tgagcgcctt gatcaccgtg tcatggacca ggtcatcggc
     4621 ggcgtcccga tcgcgcgtga gggaaagcgc atagatccgc agccgcggca ggatcgcctt
     4681 gagctgctcg tgaaaatcat gaacgtcgtt gcgggattcg gcggccatgt ccctctctcc
     4741 aggcagaaat gccttgtgcg agaccaatgc cgggaccggc gaaaagttac acgacggctc
     4801 taactcattg aaacgcccag attatctagc tcagctttgc ggcaagctgc ttgcgggccc
     4861 gcgacacgcg ggctttcagc gtgccgaccg agcagcggca cagcgcggcg gcttcctcgt
     4921 aggaaaaacc gccggcgccg accagtacga gcgcctcgcg cgcttgcggg ctcagttccc
     4981 acagcaccga cgatagttcc ttcaaggcaa gcgtggcctc gggattgtcg accgcggcca
     5041 gcggcgccgc cgcctcgtcg ttgatcgagg tcggacgccg gcgctgggtg cgcaaatccg
     5101 aataaaagcg attgcgcatg atggtgaaca gccatccttt gagattggtg ccgggcgcga
     5161 actgggcctg cttgtcgagg gcggcaagga tggtgttttg cacgaggtcg tctgcggcct
     5221 cccgttcgcg acagaggaat cgcgaaaagg cgcgcagatc gggaagcaac gccacgatgt
     5281 cgtccttaat catcgagcgg agggctcccg cgacgaagta gccgtgcaat cgttcgcact
     5341 ggcttctatg tgggcaatcg atcggccggc gcaaaggaat tctaggcagc aaccccgtcg
     5401 ccgaggcccg cgttgacccg gcacgacgcg cgcaagcgcc cccaatggcg agaggagcga
     5461 gacatgaact gggaccgtat cgagggcaac tggaaacagt tgaccggaaa ggtcaaggag
     5521 cagtggggca agctgaccga ggacgatctg accgtcatcg gcggcaagca ggatcagctc
     5581 gttggccgta tccaggagcg ctacggcatc gccaaggacg aggccgagcg acaggtcaat
     5641 agctgggcca accgcatata ggtgcttcac gtggaaccgg ctacggcatc ctgcgttgtc
     5701 gcagcaagag ctatgcacgg aggtcgatga tgggacgcgc agcgg
//
LOCUS       DASWGA010000259         8043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2438318, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000259 DASWGA010000000
VERSION     DASWGA010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8043
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2438318"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VF991_06320"
     CDS             <1..212
                     /locus_tag="VF991_06320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556090.1"
                     /translation="YVRDEPVTLQGWDGYALDIEDADGAVVMMRTYIVKDRLYRLLVT
                     AKSDMASKSAATRFLDSLRLAETRQ"
     gene            complement(321..1379)
                     /locus_tag="VF991_06325"
     CDS             complement(321..1379)
                     /locus_tag="VF991_06325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9556091.1"
                     /translation="MAASGEYRGLIHRSNADLHAWLARRPTETALEPELPIIDPHHHL
                     WHTPQRGLYLLPELLVDIGGGHNVVSTVFLECQSMFRADGPEEMRPVGEVEFVNGVAA
                     MSASGQYGKTRVCEAIVGWADLMLGARVREVLEAEIEAGGGRFRGVRYGTSHDDSVVG
                     KHVSRQIPPHRLLDPTFREGFAELGTLGLTFDSWHFHPQLPDLVDLARAFPDTTIIVD
                     HVGGVLGVGPYAGRSAEILPQWRQSIADLAKCPNVNMKLGGLGMTSFGFGFHERDTPP
                     SSQELADTWRPYIETCIEAFGPSRCMFESNFPPDKQSCGYTELWNAFKRITSGASAAE
                     KTALYSGTAARVYKMIRP"
     gene            1436..2422
                     /locus_tag="VF991_06330"
     CDS             1436..2422
                     /locus_tag="VF991_06330"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEX9556092.1"
                     /translation="MRICVFGAGAIGGNFAARLAAAGNEVSIVVRGAHLEAIRARGLT
                     LLAGDKKIVAPVKASDRPADLGPQDAVLVTMKASSQHALADSIGPLLGADTPVAFVQN
                     GIPWWYGHGLSTSRPPAPDLSRLDPGRALAKAVGLDRAVGAVVSSPNHVVEPGVVHNE
                     APDRNTLWVGETDDRTSPRIEALRATLKAAGIASPATTDIRYEIWHKLMANLTGSTVC
                     LVTGQPAHVQKTPLVNRLARRAHAEALAIAAAHGVMLDDHPDKRYGPARVYSDHRPSI
                     LQDYDLGRPMEIESIVRAPLAFARSAGVETPTLDAIESICVSLAEARGLYAS"
     gene            complement(2456..3784)
                     /locus_tag="VF991_06335"
     CDS             complement(2456..3784)
                     /locus_tag="VF991_06335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556093.1"
                     /translation="MADLPQHAGQIALWHDLLTGTSKWQSAFYINLYTPYWLGNGLAL
                     LLSFAMPVSAAMKLLLMVSCWAFVAGSVLLRRRMAADQHLDWLFICSFFGLAYEYGLF
                     PFLIAAPIGVAFIVLAHRHAERPSPASGALLCLTGLALYFSHGLTLAFAGVTGAAFLV
                     LKGRSFMAVMLSGVPYVVLAGICLTYALLGLAFAPGTSAVPGAPQWPGLFSGLKHLLF
                     FPIGAPRLDWLLAPLVPLLLLVPLLAGCGVNRRNYAAFVPIGVLLAWVVAIPESVGET
                     WFIAYRFTIFLLPFFALPFLAPRRAWARWIAPALSWAFLVIHGERLAAFAKESDSFEQ
                     VLAAAAPGFRAQSVVLDPVSRAAQNPMAYVSFPLWYQADKGGLVDFNFAYFPTQVVRF
                     REVQQPKEEHRYYFVRRTDPSPEKPMAADASAFRLLKSSGDWSLFEKVGR"
     gene            4001..4420
                     /locus_tag="VF991_06340"
     CDS             4001..4420
                     /locus_tag="VF991_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9556094.1"
                     /translation="MKGRIVRAASRPTTKAEPANFVGTVLSDPVFAPEQPSRLRASRV
                     SFMPGGRTNWHKHAVGQILYVLSGVGRYQLEGEPVQEIRPGDTVVIPPNARHWHGAAP
                     DTMMVHLAMSETNDKGEATSWFEPVSEPDYAKAPARV"
     gene            complement(4417..5781)
                     /gene="tldD"
                     /locus_tag="VF991_06345"
     CDS             complement(4417..5781)
                     /gene="tldD"
                     /locus_tag="VF991_06345"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007703631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HEX9556095.1"
                     /translation="MVDEALAGCDDGELFLEYEQSESLSFDDGKLKSASYDTSQGFGL
                     RSVMGEATGFAHASALDEPALKRAVATVKAVRSGHAGKSDESPRGTNRLLYADDNPID
                     GEAFAKKVALLQEIDAYVRGKEPKARQVSISMAASWQVVEIIRAGGWRAADVRPLVRL
                     NVSVVCADGSRMEAGSTGSGRRAAYGDIFKPEYWQREADEAIRQSLVNLQSVPAPAGE
                     MPVVLGPGWSGVLWHEAVGHGLEGDFHRKKTSVFTRMMGDMIASPGVTVVDDGTLADR
                     RGSLTIDDEGTPTQRNVLIENGRLVGLMQDRQNARLMGVRPTGNGRRESHAYAPMPRM
                     TNTIMLGGDKDPQEIIGSVKKGLYCANFGGGQVDIVSGKFVFTITEGYLIENGKIAAP
                     VKGATLIGAGSEALTKVGMVGNDMALDPGIGTCGKDGQGVPVGVGQPTLRIDALTVGG
                     TATG"
     gene            complement(6000..6971)
                     /locus_tag="VF991_06350"
     CDS             complement(6000..6971)
                     /locus_tag="VF991_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX9556096.1"
                     /translation="MKAAVVTENGVQVKDAPKPAPKPHEILIKVRAASLNRADLAVAS
                     GHRHGTVGGTGTIVGLECAGEIEAVGGEVKDFKPGDRVMSSAAGSFAEYAVTDAGRAH
                     KIPANNMTYEQAACMAVAVQTMHNALVGAGRLKKGESVLIQGASSGVGLLGMQIAKHM
                     GASIVMGTSTNDGRRARLKEFGCDLALDTRDAKWPDKVKEATAGKGVDLIVDQVSGGV
                     ANQNMEAAAILGRIVNVGRLGGMKGEFNFDLHALKRIDYIGVTFRTRTPDEVRAIVKA
                     ARADLWPAIEAGKLSLPIDKTFPLAQAAEALAHMKANAHFGKIVLVV"
     gene            complement(7013..7444)
                     /locus_tag="VF991_06355"
     CDS             complement(7013..7444)
                     /locus_tag="VF991_06355"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9556097.1"
                     /translation="MTAELRALNARFINNFITNDVAGHDAILHEGFICIGPMGARISR
                     ADYLKAWATGFDAERIPYYDYRDEKIDVFGDTALVRSTNKRVGLKESVETTSMTTYTD
                     IYVREGGTWKCIQAQITPVAPANYPPDETVVRSYMKGKAQP"
     gene            complement(7510..>8043)
                     /locus_tag="VF991_06360"
     CDS             complement(7510..>8043)
                     /locus_tag="VF991_06360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109721.1"
                     /note="activates fatty acids by binding to coenzyme A;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEX9556098.1"
                     /translation="KICDEQGNELPQGDAGTIYFADGRPFEYHNDPKKTAETKNAKGW
                     TTIGDVGYVDADDFLHLTDRKAFMIISGGVNIYPQECENLLINHPKVMDCAVFGVPNA
                     DFGEEVKAVVQPRDMADTGPALAEELLTYCRQHLSALKCPRSIDFEAELPRHPTGKLY
                     KRLLRDRYWQGRESRIV"
BASE COUNT         1379 a         2644 c         2676 g         1344 t
ORIGIN      
        1 agtatgtgcg cgacgagccc gtgaccttgc agggctggga cggctatgcg ctcgacatcg
       61 aggatgccga cggcgccgtc gtcatgatgc gcacctacat cgtgaaggac cggctttacc
      121 gcctgctggt caccgccaag agcgacatgg cgagcaagag cgctgcaacg cgcttcctcg
      181 attcactgag attggccgag acgcggcagt agagtcacgt cgtcctgagc gtagcgaagg
      241 acctcatcgc cgcttgccac cggcatgaga tccttcgctg cgctcaggat gacagtggtt
      301 ttgtgggctc gaccctcgtt ctagggcctg atcatcttgt acacccgcgc ggcggtgccg
      361 ctgtagagcg ccgtcttttc cgccgccgaa gcgcccgatg tgatccgctt gaaggcgttc
      421 cacagctcgg tgtagccgca ggactgcttg tcgggcggga agttgctctc gaacatgcag
      481 cgtgacggac cgaacgcctc gatgcaggtc tcgatatagg gccgccaggt gtcggccaac
      541 tcctgcgatg agggcggcgt gtcgcgctcg tggaagccga agccgaacga cgtcatgccg
      601 agtccgccca gcttcatgtt cacgttcgga catttggcaa ggtcagcgat gctctggcgc
      661 cactggggca ggatctccgc cgaacgcccg gcataaggcc cgacgcccaa cacgccgccg
      721 acatggtcga cgatgatggt ggtgtcggga aaggcgcgcg cgagatcgac caggtcggga
      781 agctgcggat ggaaatgcca ggaatcgaag gtcaggccga gcgtgccgag ctcggcgaag
      841 ccttcgcgga atgtcgggtc gagcaggcga tgcggcggaa tttgccggga gacgtgcttg
      901 ccgaccacgc tgtcgtcgtg cgacgtgccg tagcgcacgc cgcggaagcg gccgccgccg
      961 gcctcgatct cggcctccag cacctcgcgc acgcgcgcgc ccagcatcag gtcggcccag
     1021 ccgacgatcg cctcgcagac gcgcgtcttg ccgtactggc cggatgcgct catggcggcg
     1081 acgccgttca cgaactcgac ctcgcccact ggccgcatct cttccggccc gtcggcgcgg
     1141 aacatcgact ggcattcgag gaacaccgtc gagacgacat tgtggccgcc gccgatgtcg
     1201 accagcagct cgggcagcag ataaaggccg cgctgcggcg tgtgccagag atgatgatgc
     1261 ggatcgatga tcggcagctc gggctcgagc gccgtttcgg ttgggcgccg tgccagccac
     1321 gcgtgcagat cggcattgct gcgatggatc agtccgcgat attcacctga cgcggccatg
     1381 actgttccct ccctctttcg gggaaggagc ctacggcaag atcggagaac ggggcatgcg
     1441 gatttgcgta ttcggcgcgg gcgccatcgg cgggaatttc gcggcgcgac tcgcggcggc
     1501 cggaaacgag gtttcgatcg tggtgcgtgg cgcacatctg gaggcgatcc gcgcgcgcgg
     1561 cctcaccctg ctcgccggcg acaagaagat cgtggcgcct gtgaaggctt ctgaccgacc
     1621 ggccgacctc gggccgcagg acgccgtgct ggtgaccatg aaggcatcga gccagcatgc
     1681 gctggccgac agcatcgggc cgctgctcgg tgccgacacg cccgtcgcct tcgtgcagaa
     1741 cggcatcccc tggtggtacg gccacggcct gtcaacgtcg cgcccgccgg cccctgatct
     1801 gtcgcggctc gaccctggcc gggcgctcgc caaggccgtc ggcctggacc gtgcggtggg
     1861 tgccgtcgtc agctcgccga accacgttgt cgagccgggc gtggtgcaca acgaagcacc
     1921 ggaccgcaac acactctggg tcggcgagac tgacgatcgc accagtcccc gcatcgaagc
     1981 gctgcgcgcc acgttgaagg cggccggcat cgcctcgcct gcgacgaccg acatccgcta
     2041 cgagatctgg cacaagctga tggccaatct cactggctcg acggtgtgcc tggtcaccgg
     2101 ccagcccgcc cacgtccaga agacgccgct cgtcaaccgg ctggcacggc gcgcccatgc
     2161 cgaggcgctg gcgatcgcgg cggcgcacgg cgtgatgctc gacgaccatc cggacaagcg
     2221 ctacgggccc gcgcgcgtct attccgacca tcgcccgtcg atcctgcagg actacgacct
     2281 cggtcggccg atggagatcg agtcgatcgt gagggcgccg ctcgccttcg cccgcagcgc
     2341 cggcgtggag acgccgacgc tcgatgcgat cgaatcgatc tgcgtcagcc tggctgaggc
     2401 gagaggactg tacgcctcgt agagcaggat cttcgtcttc ggagggggag ggatcctaac
     2461 gcccgacctt ctcgaatagc gaccagtcgc ctgacgattt cagcagcctg aacgcgctcg
     2521 cgtcggccgc catcggcttt tccggcgagg ggtcggtccg gcgcacgaag taatagcgat
     2581 gctcctcttt cggttgctgc acctcgcgaa agcgcaccac ctgagttggg aaataggcga
     2641 agttgaaatc gaccagcccg cctttgtcgg cctggtacca gagcggaaag ctgacatagg
     2701 ccatcgggtt ctgcgccgcc cggctgaccg ggtcgaggac gaccgactgg gcgcggaaac
     2761 caggcgcggc cgcagccagc acctgctcga acgagtcgct ctccttggcg aaggccgcca
     2821 gacgctcgcc atgaatgacg aggaaggccc aggacaatgc cggtgcgatc catcgagccc
     2881 acgcccgcct tggcgcaagg aacggcaggg cgaagaaggg gagcaggaag atcgtgaagc
     2941 gataggcgat gaaccatgtc tcgcccaccg actccggtat cgccacgacc caggccagca
     3001 acacgccgat cggcacgaag gctgcgtagt tgcgccggtt cacgccgcag ccggccagca
     3061 gcggcacgag gagcagaagc ggcacgagcg gcgccagcag ccagtcgagc ctgggcgcgc
     3121 cgatcggaaa gaacagcaga tgcttcaggc cactgaacaa tcccggccat tgcggcgcgc
     3181 ccggcacagc cgacgtgccg ggtgcgaagg cgaggccgag cagggcgtag gtcaggcaaa
     3241 tgccggcgag gaccacatag ggcacaccgc tcagcatcac ggccatgaac gaacgaccct
     3301 tcagcacaag aaaggccgcg ccggtcacgc cggcaaaggc cagtgtcagt ccatgcgaga
     3361 aatagagcgc caagcccgtg agacagagca gcgcgcccga ggcgggcgac ggacgctcgg
     3421 cgtggcgatg ggcaagcacg atgaaggcga cgccgatggg cgcggcgatc aggaaaggaa
     3481 aaaggccgta ctcgtaggcc aggccgaaga agctgcagat gaacaaccag tcgaggtgct
     3541 ggtcggccgc catccgccgt cgcagcagca ccgagcccgc gacgaaggcc caacagctga
     3601 ccatgagcag gagcttcatc gcagccgaca ccggcatggc gaacgacagc agcagcgcaa
     3661 gcccgttacc cagccagtaa ggcgtgtaaa ggttgatgta gaaagcggac tgccacttcg
     3721 acgtgccggt cagcaagtca tgccacagcg cgatctgccc cgcatgctgt ggcaagtccg
     3781 ccatcggcgg tcgtggcgcg atccagaacg tggcgcccgc gacgacaacg gtcagccaga
     3841 acgctgctcg ctcgacttgt ctgtttctcg gcactcgctg gtatctatgc gacggccgtc
     3901 cgtggtccac aacgggaaaa aagccaccag atggacggct cgaccgccga cgagcgcgac
     3961 gctaggatcg atgaaacgct acagccagcg aggaaacgcc atgaagggac gaatcgtacg
     4021 cgccgcttcc cgccccacga ccaaggcgga gccggccaat ttcgtcggca cggtgctgtc
     4081 ggatccggtg ttcgctcccg agcagccgtc gcgcctgcgc gcgtcgcgcg tgtcgttcat
     4141 gccgggtgga cgcacaaact ggcacaagca cgccgtcggc cagatccttt acgtactgtc
     4201 gggcgtcggc cgctaccagc tcgaaggcga gccggtgcag gagatcaggc cgggcgacac
     4261 ggtcgtcatc ccgccgaatg cgcgccattg gcatggcgcg gcgcccgaca ccatgatggt
     4321 ccatctcgcc atgtcggaga ccaatgacaa gggcgaggcg acgagctggt tcgaaccggt
     4381 gagcgagccc gactacgcca aggcccccgc cagggtctag ccggtcgccg tgccgccgac
     4441 cgtcagcgcg tcgatgcgca gggtcggctg gccgacgccg accggcacgc cctggccgtc
     4501 cttgccgcag gtgccgatgc cgggatcgag cgccatgtcg ttgccgacca tgccgacctt
     4561 ggtgagcgcc tcggagcccg cgccgatcag cgtcgcgcct ttaactggcg cggcgatctt
     4621 gccgttctcg atcaggtagc cctcggtgat ggtgaacacg aacttgcccg aaacgatgtc
     4681 gacctggccg ccgccgaaat tggcgcagta gaggcccttc ttcaccgagc cgatgatctc
     4741 ctgcggatct ttgtcgccgc ccagcatgat ggtgttggtc atgcgcggca tcggcgcata
     4801 ggcgtggctc tcgcgtcttc cgttgccggt cggcctgacg cccatcaggc gcgcgttctg
     4861 gcgatcctgc atcagcccga ccagccggcc gttctcgatc agcacgttgc gctgcgtcgg
     4921 cgtgccctcg tcgtcgatgg tgagcgagcc gcggcgatcg gcaagcgtgc cgtcgtcgac
     4981 tacggtgacg ccgggcgagg cgatcatgtc gcccatcatg cgggtgaaca ccgaggtctt
     5041 cttgcgatgg aaatcaccct ccagcccgtg gcccaccgcc tcgtgccaca gcacgcccga
     5101 ccagcccggc cccagcacga ccggcatctc gccagccggc gccggcaccg attgcaggtt
     5161 gaccagcgac tggcggatcg cctcgtcggc ctcgcgctgc cagtattccg gcttgaagat
     5221 gtcgccgtaa gcggcgcgcc ggccgctgcc ggtgctgccg gcttccatgc ggctgccgtc
     5281 ggcgcagacc acgctcacgt tcagccgcac cagcggacgc acgtcggcgg cgcgccagcc
     5341 gccggcgcgg atgatctcga cgacctgcca cgaggccgcc atcgagatcg agacctggcg
     5401 cgccttgggc tccttgccgc gcacataggc gtcgatctcc tgcagcaacg cgaccttctt
     5461 ggcgaaggct tcgccgtcga tcggattgtc atcggcatag agcagccggt tggtgccgcg
     5521 cggcgattcg tccgacttgc cggcgtggcc ggagcgcacc gccttgacgg tggcgacggc
     5581 gcgtttcagc gccggctcgt cgagtgcgga ggcatgggcg aaacctgtcg cctcgcccat
     5641 caccgagcgc aggccaaagc cctggctggt gtcgtacgac gcgcttttga gcttgccgtc
     5701 gtcgaacgac aggctctcgc tctgctcgta ttccaggaac agctcgccgt cgtcgcagcc
     5761 cgccagcgcc tcgtcgacca tcttggcggt gcggcgctgg tcgaggccgc ctttgccgaa
     5821 aaacaggccg tcggccgtgg cgagatgatt gatcgatttg ctcataaaag tgcctttcag
     5881 aacaaagcag tgtcatcctg agcgcagcga aggatctagt gcccggtgtc agcggcgatc
     5941 gtacgcccgt ggaagcgtcg atgagatcct tcgctaacgc tcaggatgac agattggggt
     6001 cagacgacca ggacgatctt gccaaaatgg gcattggcct tcatgtgcgc aagcgcctcg
     6061 gccgcctggg ccaaggggaa cgtcttgtcg atcggcagcg acagcttgcc cgcctcgatg
     6121 gccggccaca ggtcggcgcg ggccgccttg acgatggcgc gcacttcatc gggcgtgcgg
     6181 gtgcggaagg tgacgccgat atagtcgatg cgcttcagcg catgcaggtc gaagttgaac
     6241 tcgcccttca tgccgcccag ccggccgaca ttgacgatgc ggcccaggat ggcggcggct
     6301 tccatgttct ggttggcgac gccgcccgag acctggtcga cgatcaggtc gacgcccttg
     6361 ccggcggtcg cttccttgac cttgtcgggc cacttggcgt cgcgcgtgtc gagcgcgagg
     6421 tcgcagccga attccttcag ccgcgcgcgg cggccgtcgt tggtcgaagt gcccatgacg
     6481 atcgaggcac ccatgtgctt ggcgatctgc atgcccaaaa ggccgacacc cgagctggcg
     6541 ccctggatca gcaccgattc gcccttcttc aggcggccgg cgccgaccag cgcgttgtgc
     6601 atggtctgca ccgccaccgc catgcaggcg gcctgctcgt aggtcatgtt gttggccggg
     6661 atcttgtggg cgcggccggc gtcggtgacg gcatactcgg cgaagctgcc ggccgcggag
     6721 ctcatcaccc gatcgcccgg cttgaagtcc ttgacctcgc cgcccaccgc ctcgatctcg
     6781 ccggcgcatt ccaggccgac gatggtgccg gtgccgccca ccgtgccgtg gcggtggccg
     6841 gacgcgaccg cgagatcggc gcggttgagc gaagccgcgc gcaccttgat caggatctcg
     6901 tgcggcttgg gcgcgggctt gggcgcatcc ttgacctgga cgccattctc ggtgacgacg
     6961 gcagccttca tgggaacctc cccgggttgg aggtccccca tagcacgcca cgctagggct
     7021 gggctttgcc cttcatgtag ctgcggacga ccgtttcgtc gggcggatag ttggcgggcg
     7081 ccacgggcgt gatctgcgcc tggatgcatt tccacgtgcc gccctcgcgc acatatatgt
     7141 cggtgtacgt ggtcatgctc gtggtctcga cgctttcctt caggccgaca cgtttgttgg
     7201 tcgagcgcac cagggcggtg tcgccgaaaa cgtcgatctt ctcgtctcgg tagtcgtagt
     7261 aggggatgcg ttcggcatcg aagccggtcg cccacgcctt gagatagtcg gcgcggctga
     7321 tccgggcacc cattggaccg atgcagatga agccctcgtg aaggatggcg tcgtggcccg
     7381 ccacgtcgtt ggtgatgaaa ttgttgatga acctggcatt gagcgcgcgc agttcggccg
     7441 tcatggcaat ccctctcttc cgaaggacta accatataac cggttaacag gtgagtccag
     7501 ccaattcggc tacacgatcc tgctctcgcg gccctgccaa tagcggtcgc gcagcaggcg
     7561 cttgtagagc ttgccggtgg gatggcgcgg cagctcggcc tcgaagtcga tgctgcgcgg
     7621 acatttcagc gccgagaggt gctggcggca ataggtcaga agctcctcgg ccagcgccgg
     7681 cccggtgtcg gccatgtcgc gcggctgcac gacggctttc acctcttcgc caaaatcggc
     7741 gttgggcacg ccgaacaccg cgcagtccat caccttggga tggttgatca aaagattctc
     7801 gcattcctgc gggtagatgt tgacgccgcc cgagatgatc atgaaagcct tgcggtcggt
     7861 gagatgcagg aagtcgtcgg catcgacgta gcccacgtcg ccgatcgtcg tccaaccctt
     7921 ggcgttcttg gtctcggcgg tcttcttggg gtcgttgtga tattcgaacg gccggccgtc
     7981 ggcgaaatag atcgtgccgg catcgccctg tggcagctcg ttgccctgtt cgtcgcagat
     8041 ctt
//
LOCUS       DASWGA010000260        11115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1420442, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000260 DASWGA010000000
VERSION     DASWGA010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 11115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11115
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420442"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /gene="nth"
                     /locus_tag="VF991_06365"
     CDS             complement(<1..447)
                     /gene="nth"
                     /locus_tag="VF991_06365"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEX9556099.1"
                     /translation="MKQAVIPEFFARLKKAIPEPETELEYDNVYQLLVAVVLSAQATD
                     VGVNRATTPLFEKIKTPAQMVALGEKKLIGYIKTIGLYRMKAKNVIALSRLLIERHGG
                     EVPHTHEELQALPGVGRKTANVVMNVAFGEATIAVDTHIFRVGNRTG"
     gene            470..967
                     /locus_tag="VF991_06370"
     CDS             470..967
                     /locus_tag="VF991_06370"
                     /inference="COORDINATES: protein motif:HMM:NF021517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HEX9556100.1"
                     /translation="MTETPVPAIHFATSLVPYRSLSPEGFRWLIRGAIAANLLIGLPM
                     LLFGAWPVLGFMGLDVLLLWWLFKRSYLDARRSETLVLTDREFIVDRVAPDGEREQHR
                     LDAYWLRVDWDAASERLALVSRGNRVVIGRFLAPAERERVAGELKAALSALRSPRYAH
                     EWDER"
     gene            complement(1022..1819)
                     /gene="dapB"
                     /locus_tag="VF991_06375"
     CDS             complement(1022..1819)
                     /gene="dapB"
                     /locus_tag="VF991_06375"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEX9556101.1"
                     /translation="MKIAIAGAAGRMGQMLIRQIEHTEGCALAGAIEGAASNALGRDA
                     GEVAGVGAKGVKIVSDAPAAIGAADVVIDFTVPAATVAHAKIAADKGVAMVIGTTGLN
                     PEQTAAVHEAAKKVPIMWAANMALGVNILLALVEKTAAMLDPSYDIEVLEMHHRHKID
                     APSGTALALGRAVAAGRQVRLEDVWRKSRDGHTGARPAGEIGFAALRGGEEVGVHTVM
                     FAAAGERLELSHRAFSRETYAAGAVRAAQWLAGKKPGLYGMKDVLGL"
     gene            1874..2146
                     /locus_tag="VF991_06380"
     CDS             1874..2146
                     /locus_tag="VF991_06380"
                     /inference="COORDINATES: protein motif:HMM:NF023174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3303 family protein"
                     /protein_id="HEX9556102.1"
                     /translation="MLFMVVEKFRNQDGKAVYRKLRDGGRGLPDGLKFVASYVAADLG
                     RCFQLMETDDVTLFQRWIADWQDVVEFEVVPVVEGRITREALTPLL"
     gene            complement(2147..3607)
                     /locus_tag="VF991_06385"
     CDS             complement(2147..3607)
                     /locus_tag="VF991_06385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010914235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M81 family metallopeptidase"
                     /protein_id="HEX9556103.1"
                     /translation="MTKRVYIAALGTETNQFVPFPTGRRAYEEHGVWRGDATWHEPTN
                     FTAPLHVWRKAAEARGWTVIEGLATFAAPSGTTVRAVYEDFRDEILAGIKAALPLDAV
                     LINVHGAMVADGYDDCEGDLLSKVRAIVGPKVAIGAEFDLHCHLSALMLDSADVLIGY
                     KEYPHTDTMERAAELFAIVADTVDGKVKPVMARYDCRMIAQYRTSVPPINEFVTRMKS
                     LEGKDGILSVSLSHGFSFADVEDVGTRTLVVADRDKHKAQALAKTLGEELWANRERYA
                     TQYLSIPEAMERAASHNQGPLVLADRADNPGSGAPGDSTFVLRALVDRRIGPALFGVM
                     WDPMAFRVAEEAGEGARLRMRLGGKSGEVSGNPVDLDVTVKKIARGVRQPYGPVMVPL
                     GDMALLSSEHVDVAICTLRTQTFHADAFKAVGADPADYRVVVVKSAQHFYNGFVGLAK
                     EILYVASPGAADPDVTRLPYTKRKTPFWPKTADPWK"
     gene            complement(3610..4203)
                     /locus_tag="VF991_06390"
     CDS             complement(3610..4203)
                     /locus_tag="VF991_06390"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008145171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX9556104.1"
                     /translation="MVWKHDTVSGSDGKPRCGWASADPLYQKYHDTEWGRPLKDDRAL
                     FELLTLEGCQAGLSWITVLRKREHYRKVYDGFDPKKIARYTPAKLEKLLADPGIIRHR
                     GKIEASVGNARAYLALVEREGSFAKFLWSFVGGKPRKNRPKSLKDVPSKSAESDAMSK
                     ALQKAGFKFVGSTICYAFMQASGMVDDHIVGCHRHRE"
     gene            4265..4984
                     /locus_tag="VF991_06395"
     CDS             4265..4984
                     /locus_tag="VF991_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012707192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HEX9556105.1"
                     /translation="MAKSLADLRVCIFDVFGTVVDWRGSLIEDLPKLGREYGLETDWT
                     SFADDWRGLYQPQMHRVRKGELPWTNIDELHKEAFEMLLAKRGLKHPGEDGSWEFTHL
                     WHKLRPWPDSVEGIGMMKKKYVVATLSNGNVALLINMAKNGGIPWDHCFSGETFRHYK
                     PDPEAYLGVVKTMYLEPHQVMLVAAHNGDLKAAQKCGLSTGFVHRPKEHGPNQKTDLK
                     ADGDWDVTGNSMVEVAKKIGC"
     gene            complement(5104..6723)
                     /locus_tag="VF991_06400"
     CDS             complement(5104..6723)
                     /locus_tag="VF991_06400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556106.1"
                     /translation="MIGKTRLSRRSILAGASALALPAGFSAPARADEKVVRFGISMSD
                     VPLTTGQPDRGAGAYKFTGYTLYDPLVAWEMDISDRPGKLIPGLATEWKVDDADKTLW
                     AFKLRPDVKFHDGSAFNADAVVWNFDKVFDTKSPQFDQRQASQVRPRLPSVASYKKLD
                     DMTVQVKTKAVDALFPYQMLWFLISSPAQFEKLGKDWNKFASEPSGTGPFKLARLVPR
                     ERVELVPNGAYWNPKRLPKSDRMVLICAPESATRTAALLSGSVDLIETPPPDAVDRLT
                     RGGMKIVQNITPHVWNYHPSMVPGSPWTDIRLRKAANLAIDRNAIVQLLGGLARPAYG
                     QVDKTSPWFGKPTFELKYAPDEARKLMSQAGFSKTQPLKTKFVVASGGTGQMLSLPMN
                     EAIQEMLKEAYIDLELKVVELEALYTAWRGGAKADMNKDVTANNIAYVTSDPLYALTR
                     FFHSNQAAPVGVNWSYYANPEVDKLIDETLATFDPAKQDALLAKVHEKVVDDAVLIWV
                     VHDTNPHALSPKIKSYVQAQHWFQDLTTIGT"
     gene            complement(6740..8080)
                     /locus_tag="VF991_06405"
     CDS             complement(6740..8080)
                     /locus_tag="VF991_06405"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9556107.1"
                     /translation="MARREFTAAALTEAFLARIDALDHKIASFVTLTADLARAAAKQA
                     DMEMGQGFHRGPLHGIPIGLKDIYETAGVRTTGHSHLRLDYVPTSDAETVRRLKAGGA
                     IILGKLATHEFANGAMTPDQPFPAARNPWNTDYQPGGSSSGSGAAVAAALCMGAMGSD
                     TGGSIRNPAGFCGTAGIKPTYGLVSRCGIFPLSFSLDTAGPLTWTVEDSALMLDVLAG
                     HDPNDQASAKAPKVDYGAAASRPIKGMRIALARNWYEGVTPDMAKGIDEAVRVLRDQG
                     AIVEDVTFPDIWDYHICARVIITVEAHAIHRQEVIECPEKFGYTTRRRFQLGAFLTAE
                     QYLSALRFRRKLQLDTRAAMRGYDLVMTANHWGAPEIFKEPQPIFHFLDKASLTMPFN
                     VTGQPALTVCCGFGSDGFPLSFQLAGRPFDEASVFAAGAAYERATPWRLRRPTL"
     gene            complement(8133..8315)
                     /locus_tag="VF991_06410"
     CDS             complement(8133..8315)
                     /locus_tag="VF991_06410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556108.1"
                     /translation="MKPPTLEEFRARAALTGLPLTPEDIEELHKGYVGLINLMDRIPS
                     RWAWAAEPPHVFRADE"
     gene            8446..10050
                     /locus_tag="VF991_06415"
     CDS             8446..10050
                     /locus_tag="VF991_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007688927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556109.1"
                     /translation="MFKRFPVVVVTFGLFAAAAMPAIAQGTLRIGMTAADIPQTTGQP
                     DQGFEGFRFAGYTIYDALVNWDLSKADTIADVRPGLATEWAPVEGEPTKWIFKLRQGV
                     KFHDGSNFDADVVVWNLEKILNDKSPQFDPKQAAQARARVPTLVGWKAVDKYTVELTT
                     RVVNSLFPYDMSYIFYSSPTNWEKQGKDWVKVALQPAGTGPFKVDRVVPRERMELSRN
                     ADYWEKARIPKLDKVILFPMPEAATRTAALLAGQVDWIEVPAPDAIPRLKQGGMVIVT
                     NKYPHNWAYQPSMVEGSPWTDIRVRKAANLAIDRAGLNKLLGGLMIESKGVVYPGHPW
                     FGSPKFDIKYDPAEAKKLLAEAGYSATKKPKIKIAISTSGSGQMLPLPMNEYVQENLN
                     AVGFDAQFEVMEWNALVTFSFQPVTGDAATKAGVNGINISRATVDPYSAFMRLYHSDF
                     VPPKGANWGILKDPKIDELINTAHTSFDRAAQTKALADVHSYIVDQAYWVYIAHDLNP
                     RAMSPKVKGFVQAQSWFQDLTPVEMK"
     gene            10070..11023
                     /locus_tag="VF991_06420"
     CDS             10070..11023
                     /locus_tag="VF991_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556110.1"
                     /translation="MLLYALRRLIYLIPVAFGVSLLVFGLVHLAPGDPISAIVPPDAP
                     KEVVDKLKEYYGFDKPLPVQYFRWLAVTLTGDLGTSIGTGRPVATEVASAFGNTIILA
                     ISATLLAFSLAIILGTAAAYAKSRIVDRLVTLISLVGVSVPHFWLAIVLVIIFAVELG
                     ALPPMGIGPENSTGWRLDRAHLAHMVLPTIALSVIPLGVVTRTVRSTIKETLSMEFVT
                     ALQAKGMSDGQILRHVLKNAAPTCLAVMGLQAGNLIGGSILIETVFAWPGTGFLLNSA
                     IFRRDLPILQGTTLVLAFFFMMLNLTVDVIQTMVDPRIKRN"
BASE COUNT         1854 a         3614 c         3654 g         1993 t
ORIGIN      
        1 cccggtgcgg ttgccgacgc ggaagatgtg cgtgtcgacc gcgatggtgg cttcgccgaa
       61 ggccacgttc atcaccacgt tggcggtctt gcggccgaca ccgggcagcg cctgcagctc
      121 ctcgtgcgtg tgcggcacct cgccgccgtg cctttcgatc agcaaccggc tgagcgcgat
      181 cacgttcttg gccttcatgc ggtagaggcc gatggtcttg atgtagccga tgagcttctt
      241 ctcgccgagc gccaccatct gggcaggtgt cttgattttt tcgaacaacg gcgtcgtcgc
      301 ccggttgacg ccgacatcgg tcgcctgggc cgacagcacg acggcgacca gcaattgata
      361 gacgttgtcg tactccagct cggtctcggg ttccgggatc gccttcttga ggcgggcgaa
      421 gaattccggg atgacggctt gcttcatcag ggccatatag ggtcatagca tgactgaaac
      481 gcccgttccg gccatccatt tcgccacctc gctggtgccc tatcgcagcc tgtcgccgga
      541 gggttttcgc tggctgatcc gcggcgcgat cgcggcgaac cttttgatcg gcctgcccat
      601 gctgctgttc ggcgcctggc cggtgctggg cttcatggga ctcgacgtcc tgctgctgtg
      661 gtggttgttc aagcgcagct acctcgacgc ccggcgcagc gagaccctgg tgctgaccga
      721 ccgcgaattt atcgtcgatc gcgtggcgcc cgacggcgag cgcgagcagc accggctcga
      781 cgcctactgg ctgcgcgtgg actgggatgc ggcgtcggag cggctggcgc tggtctcgcg
      841 cggcaacagg gtcgtgatcg gccgcttcct ggcgccggcc gagcgcgagc gcgtcgccgg
      901 cgaactcaag gcggcgcttt cggcgctgcg ttcgccgcgc tacgcgcacg aatgggacga
      961 gcgctgacga gacagaaaat tacatttgta cgtccgatgg tgcttacttt ttcaaagcaa
     1021 cttacaggcc cagcacgtct ttcatgccgt agaggccggg cttcttgccg gcgagccatt
     1081 gggcggcgcg gaccgcgccc gccgcatagg tctcgcggct gaacgcgcga tggctgagct
     1141 ccagccgctc gccggcggca gcgaacatca ccgtgtgcac gcccacttcc tcgccgccgc
     1201 gcaaggcggc gaagccgatc tcgccggccg gccgcgcccc ggtatggccg tcgcggctct
     1261 tgcgccagac atcttccagc ctgacctgac ggccggcggc gaccgcgcgg cccagcgcca
     1321 gcgccgtgcc cgagggcgcg tcgatcttgt ggcgatggtg catctccaga acttcgatgt
     1381 cgtagctggg atcgagcatc gccgcggtct tctcgaccag cgccagcagg atattgacac
     1441 ccagcgccat gttggccgcc cacatgatcg gcaccttctt ggccgcctcg tggaccgcgg
     1501 cggtctgctc ggggttgagc ccggtcgtgc cgatcaccat ggccacgccc ttgtcggcgg
     1561 cgatcttcgc atgggccacc gtggcggccg gcacggtgaa gtcgatcacc acgtcggcgg
     1621 cgccaatggc cgccggcgcg tccgatacga tcttcacgcc tttggcgccc acgcccgcga
     1681 cctcgccggc gtcgcggccg agcgcgttgc tggcagcgcc ctcgatggcg ccggccaagg
     1741 cgcagccttc ggtgtgctca atctgccgga tcagcatctg gcccatgcgc ccggcggcgc
     1801 cggcaatagc gatcttcatc tcgttcccct gcaatcgatc gcgctagatt accggactcg
     1861 cagggggtcg gacatgctct tcatggtggt cgaaaagttt cgtaaccagg acggcaaggc
     1921 ggtctatcgc aagctgcgcg atgggggccg cggcctgccc gacgggctga aattcgtggc
     1981 gagctacgtc gcggccgacc tcggccgctg tttccagctc atggagaccg acgatgtcac
     2041 gctgttccag cgctggatcg ccgactggca ggacgtcgtc gagttcgagg tcgtgcccgt
     2101 ggtcgaaggc cggatcacgc gcgaggcgct gacgccgctg ctgtagtcac ttccagggat
     2161 cggctgtctt gggccagaac ggcgtcttgc gcttggtgta gggcaggcgg gtgacgtcgg
     2221 gatcggcggc gcccggcgag gcgacgtaga ggatctcttt cgccagcccg acgaagccgt
     2281 tgtagaaatg ctgcgccgat ttcaccacga cgacgcgata atcggccgga tcggcgccga
     2341 ccgccttgaa ggcgtcggcg tggaaggtct gggtacgcag ggtgcagatc gccacgtcga
     2401 catgctccga tgacaagagc gccatgtcgc ccagcggcac catcaccggg ccgtagggct
     2461 ggcgcacgcc gcgcgcgatc ttctttaccg tgacgtcgag atcgaccgga tttccgctca
     2521 cctcgccaga cttgccgccc agccgcatcc gcaggcgcgc gccttcgccc gcctcctcgg
     2581 cgacacggaa cgccatggga tcccacatca cgccgaacag cgccggcccg atccggcgat
     2641 cgaccagcgc cctgagcacg aaggtcgaat cgcccggcgc acccgagccg ggattgtcgg
     2701 cccggtcggc cagcaccagt ggcccctgat tgtgcgaggc ggcgcgctcc atcgcctcgg
     2761 gaatcgacag gtactgggtg gcgtagcgct cgcggttggc ccacagctcc tcgccgagcg
     2821 tcttggcgag cgcctgggcc ttgtgcttgt cgcggtcggc gaccaccagg gtacgcgtgc
     2881 cgacatcctc gacatcagcg aaggaaaagc cgtggctcag cgagaccgag aggatgccgt
     2941 ccttgccctc gagcgacttc atgcgtgtca cgaactcgtt gatcggcggc acggacgtgc
     3001 ggtactgcgc gatcatgcgg cagtcgtagc gcgccatcac cggcttcacc ttgccgtcga
     3061 cggtgtcggc gacgatcgcg aacagctcgg ctgcgcgctc catcgtgtcg gtatgcgggt
     3121 attccttgta gccgatcaac acgtcggcgc tgtcgagcat cagcgcgctg agatggcagt
     3181 gcagatcgaa ctccgcgccg atcgccacct tcgggccgac gatggcgcgg acttttgaca
     3241 gcaggtcgcc ttcgcagtcg tcgtagccgt cggccaccat ggcgccatga acgttgatca
     3301 gcacggcatc gagcggcaaa gcggccttga tgccggccag gatctcgtcg cgaaagtctt
     3361 catagacggc gcgcaccgta gtcccggagg gcgcggcgaa ggtcgccagc ccctcgatga
     3421 cggtccagcc gcgcgcctcg gccgccttgc gccagacatg caagggcgcg gtgaagttgg
     3481 tcggctcgtg ccaggtggcg tcgccgcgcc acacgccgtg ctcctcgtag gcgcgccggc
     3541 cggtgggaaa gggcacgaac tgattggtct cggtgccgag ggcggcaatg taaacgcgct
     3601 tggtcaaggt tactcccgat ggcgatgaca gccgacgata tggtcgtcga ccatgccgga
     3661 ggcctgcatg aaggcgtagc agatggtcga gccgacgaac ttgaagccgg ccttttgcag
     3721 cgccttggac atggcgtcgc tttcagccga cttgctcgga acatccttca ggctcttcgg
     3781 ccggttcttc ctgggcttgc cgccgacgaa gctccacagg aatttcgcga acgagccttc
     3841 gcgttcgacc agcgccaggt aggcccgggc gttgccgacg ctcgcctcga tcttgcccct
     3901 gtggcgaatg atgccgggat cggccagcag cttttcaagt ttggccggcg tatagcgcgc
     3961 gatcttcttg ggatcgaaac cgtcatagac cttgcggtaa tgctcgcgct tgcgcagcac
     4021 cgtgatccac gacaggccgg cctggcagcc ttcgagcgtt aaaagctcga acagggcgcg
     4081 atcgtctttc agcggccggc cccattcggt gtcgtgatat ttctggtaga gcggatcggc
     4141 cgatgcccag ccgcatcgcg gcttgccgtc gctgccgctc accgtgtcgt gcttccaaac
     4201 catgcgccga ccctacccaa gcccattggc ggacgccaca ctggcaggca acggaggaag
     4261 cgccatggcc aagtctctcg ccgatctaag agtctgcatc ttcgacgtgt tcggcacggt
     4321 ggtcgattgg cgcggcagcc ttatagagga cctgcccaag ctcggccgcg aatacggcct
     4381 ggagaccgac tggacgagct tcgccgacga ctggcgcggg ctttaccagc cgcagatgca
     4441 tcgtgtgcgc aagggcgagc tgccgtggac caatatcgac gaactgcaca aggaagcctt
     4501 cgagatgctt ttagccaagc gcgggctaaa gcatcccggc gaggacggct cttgggaatt
     4561 cacgcatctc tggcacaagc tccggccctg gcccgactcg gtcgagggca tcggcatgat
     4621 gaagaagaag tacgtcgtgg ccacgctcag caacggcaac gtggcgctct tgatcaacat
     4681 ggccaagaac ggcggcatcc cgtgggacca ctgcttctcg ggcgagacct tccgccatta
     4741 caagcccgat cccgaggcct atctcggcgt ggtcaagacc atgtatctcg agccgcatca
     4801 ggtgatgctg gtcgccgccc acaacggcga cctcaaggcg gcgcagaaat gcggcctgtc
     4861 gacgggcttc gtgcaccggc ccaaggagca cggccccaac cagaagaccg acctcaaggc
     4921 cgacggcgac tgggacgtca ccggcaactc gatggtcgaa gtggcaaaga agatcggctg
     4981 ttaagactcg tcatcccgac cgaagccgag cgaagcgagg cgtagtggag ggacctcctc
     5041 atgcttgtac tcgacgaaga ttaggtccct ccactccgct tcgctccggt cgggatgacg
     5101 gtctcaggtg ccgatcgtcg tcaggtcctg gaaccagtgc tgggcctgca cgtacgactt
     5161 gatcttgggc gacagcgcat gcgggttggt gtcgtgcacc acccagatca gtacggcgtc
     5221 gtcgacgacc ttctcgtgca ccttggccaa cagcgcgtcc tgcttggctg gatcgaaggt
     5281 cgccagcgtc tcgtcgatca gcttgtcgac ctccggattg gcgtaatagc tccagttcac
     5341 gccgacaggc gcggcctggt tggagtggaa gaagcgcgtc agcgcataga gcggatcgga
     5401 cgtcacatag gcgatgttgt tggcggtgac gtccttgttc atgtcggcct tggcgccgcc
     5461 acgccacgcc gtgtagagcg cctcgagctc gaccaccttg agctcgagat cgatataggc
     5521 ctccttgagc atctcctgga tggcctcgtt catgggcagc gacagcatct gccccgtgcc
     5581 gccgctcgcc accacgaact tggtttttag cggctgggtc ttgctgaagc ccgcctggct
     5641 catcagcttg cgcgcctcgt cgggtgcata tttgagctcg aacgtcggct tgccgaacca
     5701 cgggctggtc ttgtcgacct ggccgtaggc cggccgggca agcccgccca ggagctggac
     5761 gatggcgttg cggtcgatgg cgagattggc tgccttgcgc agccggatgt cggtccacgg
     5821 cgagcccggg accatcgagg gatgatagtt ccagacgtgc ggtgtgatgt tctgcacgat
     5881 cttcatgccg cccctggtca gtcggtcgac ggcatcgggc ggcggcgtct cgatcaggtc
     5941 gacgctgccc gacagcagcg ccgccgtgcg ggtcgcggac tccggcgcgc agatcagcac
     6001 catgcggtcc gacttcggca gacgcttggg attccagtag gccccattgg gtaccagctc
     6061 gaccctttcg cgcggcacca gccgggcaag cttgaacggg ccggtgcccg atggctccga
     6121 cgcgaacttg ttccagtcct tgccgagctt ctcgaactgg gccggactgg aaatcaggaa
     6181 ccacagcatc tgatagggga agagcgcgtc gaccgccttg gtcttcacct gcacggtcat
     6241 gtcgtcgagc ttcttgtagc ttgccaccga aggcaggcgc ggccgcactt gcgaggcctg
     6301 gcgctggtcg aactgcggcg acttggtatc gaacaccttg tcgaagttcc agaccacggc
     6361 gtcggcattg aaggccgaac cgtcgtggaa cttcacgtcg ggccggagct tgaatgccca
     6421 cagcgtcttg tcggcgtcgt cgaccttcca ttcggtggcg aggccgggga tcagcttgcc
     6481 cggccggtcg gagatatcca tctcccaggc gaccagcgga tcgtagagcg tatagccggt
     6541 gaacttgtag gcgccggcgc cgcggtcggg ctggccggtc gtgagcggca cgtccgacat
     6601 cgagatgccg aagcgcacga ccttctcgtc ggcccgcgcc ggcgcactga aacctgcggg
     6661 cagggcgagc gcgctggcgc cggccaggat cgagcggcgc gaaaggcggg tcttgccgat
     6721 catgtaggtc tcctgaggac taaagcgttg ggcgacgcag ccgccacggc gtggcgcgct
     6781 cgtaggcggc accggcggcg aacacgctgg cctcatcgaa tggccggccg gcgagctgga
     6841 agctcaaggg aaagccgtcg ctgccgaagc cgcagcacac ggtgagcgcg ggctggccgg
     6901 tgacgttgaa cggcatggtg agcgaggcct tgtcgaggaa gtggaagatc ggctggggtt
     6961 ccttgaaaat ctccggcgcg ccccagtggt tggcggtcat caccaggtcg tagccgcgca
     7021 tggcggcgcg cgtgtcgagt tgcagcttgc ggcggaagcg cagggccgag agatactgct
     7081 cggctgtcag gaaggcgccg agctggaagc ggcggcgcgt ggtgtagccg aatttctccg
     7141 ggcactcgat cacctcctgg cggtggatgg cgtgtgcctc gacggtgatg atgacgcggg
     7201 cgcagatgtg atagtcccaa atgtcgggga aagtgacgtc ctcgacgatg gcgccctgat
     7261 cgcgcagcac ccgcaccgcc tcgtcgatgc ccttcgccat gtcgggcgtc acgccctcat
     7321 accagtttcg tgccaaggcg atgcgcatgc ccttgatcgg acgggatgcc gccgcgccat
     7381 agtcgacctt gggcgccttg gccgaggctt gatcattggg atcgtggccg gccaacacgt
     7441 cgagcatcag ggcgctgtcc tcgaccgtcc aggtgagcgg acccgccgta tcgaggctga
     7501 aggacagggg aaagatgccg cagcggctca ccaggccata ggtcggcttg atgccggcgg
     7561 taccgcagaa gcccgcggga ttgcggatcg agccgccggt gtcggagccc atggcgccca
     7621 tgcaaagtgc cgccgcgaca gccgcgcccg aaccgctcga cgagccgccg ggttgatagt
     7681 cggtgttcca gggattgcgc gccgccggga aaggctggtc gggcgtcatc gcgccgttgg
     7741 cgaattcgtg ggtggcgagc ttgcccagga tgatcgcgcc gccggctttc agtcggcgaa
     7801 cggtttcggc gtcgctggtt ggcacatagt cgaggcgcag gtgcgaatgg ccggtcgtcc
     7861 gcacgcctgc tgtttcgtag atgtccttca agccgatcgg gatgccgtgc agcgggccgc
     7921 gatggaagcc ttggcccatc tccatatcgg cctgcttggc tgcggcgcgc gcgaggtcgg
     7981 cggtcaatgt cacgaagctc gcgatcttgt gatccagcgc gtcgatgcgc gccaggaagg
     8041 cttcggtgag tgccgccgcg gtaaactcgc ggcgggccat aagccgtccc gcgtcagcaa
     8101 tgctgagcgt cgtgaggtcg gttacgaccg ggctattcgt cggcgcggaa gacatgcggc
     8161 ggctcggcgg cccaggccca acggctgggg atgcggtcca tcaaattgat caatccgaca
     8221 tagcccttgt gcagctcttc gatgtcctcg ggcgtaagcg gcaggcccgt cagcgcagca
     8281 cgggcgcgga actcctcaag cgttggcggt ttcatcgatc ctcccgggca taagcatgca
     8341 atcgacatgc cgccctgact aggcctaaga ctcgcagcct tggcttggcc cttgcatgac
     8401 gtcgacccaa gcgctccgcg gagcgcctaa aaaatggagc ttcggatgtt caagcgcttt
     8461 cccgtcgtcg tcgtcacctt cggccttttc gctgcagctg caatgcctgc catcgcgcag
     8521 ggcactctgc gcattggcat gacagccgcc gacattcccc agacgacggg ccagcccgac
     8581 cagggcttcg aaggcttccg ctttgccggc tacacgatct acgacgcgct ggtgaactgg
     8641 gacctgtcca aggccgatac catcgccgac gtccggcccg gtcttgccac cgaatgggcg
     8701 ccggtcgaag gcgagcccac caagtggatc ttcaagctgc ggcaaggggt gaagttccat
     8761 gacggttcga acttcgacgc cgacgtggtg gtgtggaacc tcgagaagat cctgaacgac
     8821 aagtcgccgc aattcgatcc caagcaggcg gcccaggcgc gtgcgcgcgt gccgacgctg
     8881 gtcggctgga aggccgtcga caagtacacc gttgagctca ccacgcgcgt ggtgaactcg
     8941 ctcttccctt acgacatgtc ctacatcttc tattcgagcc cgaccaactg ggagaagcag
     9001 ggcaaggact gggtcaaggt ggcgctgcag ccggccggta ccggcccgtt caaggtcgac
     9061 cgggtcgtgc cgcgcgagcg catggagctg tcgcgcaatg cagactactg ggagaaggcg
     9121 cggattccca agctcgacaa ggtgatcctg ttccccatgc ctgaggcggc gacccgtacc
     9181 gcggcgctgc tggcgggcca ggtcgactgg atcgaagtgc cggcgcccga cgccattccg
     9241 cgtttgaagc agggcggcat ggtgatcgtc accaacaagt atccgcacaa ctgggcctac
     9301 cagcccagca tggtcgaagg ctcgccgtgg accgatatcc gggtgcgcaa ggcggccaac
     9361 ctcgcgatcg accgggccgg cctgaacaag ctgctgggcg gcctgatgat cgagtccaag
     9421 ggcgtggtct atcccggcca tccgtggttc ggctcgccca agttcgacat caagtacgat
     9481 ccggccgagg caaagaagct cctggccgag gcgggttaca gcgcgaccaa gaagccaaag
     9541 atcaagatcg ccatctcgac ctcgggttcg ggccagatgc tgccgctgcc gatgaacgag
     9601 tacgtgcagg agaacctgaa cgcagtgggc ttcgacgccc agttcgaggt catggagtgg
     9661 aatgcgctgg tcaccttctc cttccagccc gtcaccggcg acgccgccac caaggcgggc
     9721 gtcaatggca tcaacatcag ccgcgccacg gtcgatccct attcggcttt catgcgcctc
     9781 tatcacagcg atttcgtgcc gccgaaaggg gccaactggg gcatcctgaa ggatcccaag
     9841 atcgacgagc tgatcaacac cgcgcacacc agcttcgacc gcgctgccca gaccaaggcg
     9901 ctggccgacg tgcacagcta catcgtcgac caggcctatt gggtctatat cgcgcacgat
     9961 ctcaacccgc gggccatgag ccccaaggtc aagggcttcg tgcaggccca gagctggttc
    10021 caggacctca cgcctgtcga aatgaagtga cgacgaaagg cgggcggcag tgctgctcta
    10081 tgcgctcagg cggctgatct acctgatccc cgtcgccttc ggcgtatcgc tgctggtgtt
    10141 cgggctggtg cacctggcac cgggcgatcc gatctcggct atcgtgccgc cggacgcgcc
    10201 gaaggaagtc gtcgacaagc tcaaggagta ttacggcttc gacaagccgc tgccggtcca
    10261 gtatttccgc tggctggcgg tgaccttgac gggcgacctc ggcacctcga tcggcaccgg
    10321 ccggccggtg gcgaccgagg tggcctcggc gttcggcaac accatcattc tcgccatctc
    10381 cgccaccctg ctcgccttca gcctcgccat catcctcggc acggcggcgg cctacgccaa
    10441 gtcgcgcatc gtcgaccggc tggtcacctt gatttccctg gtcggcgtca gcgtgcccca
    10501 cttctggctg gcgatcgtgc tggtgatcat cttcgccgtc gagctcggcg ccctgccgcc
    10561 gatgggcatc gggccggaga actcaaccgg ctggcggctc gaccgcgcgc atctcgccca
    10621 catggtgctg ccgaccatcg ccctgtcggt gattcccctg ggcgtcgtca cccgcaccgt
    10681 gcgctcgacc atcaaggaaa cgctcagcat ggagttcgtc accgcgctgc aggccaaggg
    10741 catgagcgac ggccagatcc tgcgccatgt gctgaagaac gccgcgccga cctgcctcgc
    10801 cgtgatgggc ctgcaggccg gcaacctgat cggcggctcg atcctgatcg agacggtgtt
    10861 tgcctggccc ggcaccggct tcctgctgaa cagcgccatc ttccgccgcg acttgccgat
    10921 cctgcagggc accaccctgg tgctggcctt ctttttcatg atgctcaacc tcaccgtgga
    10981 tgtgatccag accatggtcg acccgcgcat caagcggaac tgacgatcat gaccatccaa
    11041 actccttcgt tggagctcgg caccgcgctg gtgcaaccga tcgcggccgt gggagggcgc
    11101 ggctactggc agtcg
//
LOCUS       DASWGA010000261         1969 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1039505, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000261 DASWGA010000000
VERSION     DASWGA010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1039505"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..995)
                     /locus_tag="VF991_06425"
     CDS             complement(<1..995)
                     /locus_tag="VF991_06425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEX9556111.1"
                     /translation="MNLQDLKMKKPPELLAFAEEQGVDGAAMMRRQELMFAILQKVAA
                     ADQAIFGVGTIEVAPDGFGYLRSMEANYLPGADDIYVSPTQVRKFGLRTGDTVEGEIR
                     APKDGERYFAMVQINKINFDDPDALRHRINFDSLTPLYPDEKLKLEMEGGVAVMAPAV
                     KEDEGGSRATSSGRVSSRRTGTLTKKAGTTPQQQLDISTRVIDLIAPIGKGQRALIVS
                     PPRTGKTVLLQNIAHAITANNPEVFLMVLLVDERPEEVTDMQRTVKGEVVSSTFDEPA
                     SRHVAVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDA"
     gene            complement(1172..1564)
                     /locus_tag="VF991_06430"
     CDS             complement(1172..1564)
                     /locus_tag="VF991_06430"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9556112.1"
                     /translation="MTQAFSLDSTYIHLRPDESALAMEGGAKFWAGIEGRHDLGHGRL
                     MGSTSQNADWNHWERHPAGEEILTLLSGELELVLDTPGGESRAVLKPGQTFIVPRGVW
                     HRGIVKKPGQLMFITPGAGTEHRPVEAR"
     gene            complement(1561..>1969)
                     /locus_tag="VF991_06435"
     CDS             complement(1561..>1969)
                     /locus_tag="VF991_06435"
                     /inference="COORDINATES: protein motif:HMM:NF026183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEX9556113.1"
                     /translation="LCGAAGAGHAMKALNNYLSAAGLVALCEALVVGEAFGLDPGTMV
                     DVFNSSTGKSNATEVKGRQFVVSRSFAAGFTTGLMAKDLRTAGDVAQHLELNMPMLKR
                     AVAYWADANTRLGTAADHTEIFRYAEMLAEEEP"
BASE COUNT          293 a          636 c          671 g          369 t
ORIGIN      
        1 ttggcgtcga caccgccggt cagcaccttg cccgagctcg gcaccacggt gttgtaggcg
       61 cggccgaggc gggtgatcga atcgagcagg atcaccacgt ccttcttgtg ttcgaccagg
      121 cgcttggcct tttcgatcac catttcggcg acggcgacat ggcggctcgc cggctcgtcg
      181 aaggtcgagc tcacgacctc gcccttcacc gtgcgctgca tgtcggtgac ttcctcgggc
      241 cgttcgtcga ccagcagcac catgagaaag acttcgggat tgttggccgt aatggcatgg
      301 gcgatgttct gcagcagcac cgtcttgccg gtgcgcggcg gtgacacgat cagcgcgcgc
      361 tggcccttgc cgatcggcgc gatcaagtcg atcacacggg tcgagatgtc gagctgctgc
      421 tgcggcgtgg tgccggcctt cttggtgagc gtgccggtac ggcgcgagct gacccggccc
      481 gacgaggtgg cgcgcgagcc gccctcgtct tccttgacgg ccggcgccat gacggccacg
      541 ccgccttcca tctcgagctt cagcttctcg tcgggataga gcggcgtcag cgagtcgaag
      601 ttgatgcggt ggcgcagcgc atcggggtcg tcgaagttga tcttgttgat ctgcaccatg
      661 gcgaagtagc gctcgccgtc cttgggcgcg cggatctcgc cttcgaccgt gtcgccggtg
      721 cgcaggccga atttgcggac ctgggtcggg ctgacataga tgtcgtcggc gcccggcagg
      781 tagttggctt ccatcgagcg caggtagccg aaaccgtcgg gcgccacctc gatggtgccg
      841 acgccgaaga tcgcctggtc ggcggccgcc accttctgga ggatggcgaa catcagttcc
      901 tggcggcgca tcatcgccgc gccgtcgaca ccctgctcct cggcgaatgc gaggagctcg
      961 ggcggtttct tcatcttgag gtcttggagg ttcatgtttc ttcagtctgg ggtggggaga
     1021 tgacgcacgc gccacggccg ccgggagcgg tcattgacta gaatcagcgc tgtgtcgttc
     1081 ttgaatgggc cccgtcgatc accgccgggg aggcagcgcc aagggcccta ggtggcggtt
     1141 atataaggcc gccaacccgg cctgtaaagg cctagcgcgc ctcgaccggg cggtgctccg
     1201 tcccggcgcc aggggtgatg aacatcagtt ggccgggctt tttaacgatg ccgcgatgcc
     1261 acacgccgcg cggcacgatg aaggtctgcc cgggcttcag aacggctcgg ctctcgccgc
     1321 ccggggtgtc gagcaccagc tccagctcac ccgacagcag ggtcaggatc tcctcgccgg
     1381 cgggatggcg ctcccaatgg ttccagtcgg cgttctggct cgtgctgccc atcaggcggc
     1441 cgtggccgag gtcgtggcgg ccttcgatgc ccgcccagaa cttggcgccg ccttccatgg
     1501 caagcgcgct ctcgtcgggc cggagatgga tataggtgct atcgagcgaa aacgcctggg
     1561 tcatggttcc tcctcggcca gcatttcggc gtaacgaaag atctcggtat ggtcggccgc
     1621 ggtccccaac ctggtgttgg catcggccca gtaggccacg gcacgcttga gcatcggcat
     1681 gttgagctcg aggtgctggg cgacatcgcc cgcggtgcgc aggtccttgg ccatcaggcc
     1741 ggtcgtgaag ccggccgcga agctgcgcga gaccacgaac tgacggccct tcacctcggt
     1801 ggcgttgctc ttgccggtcg agctgttgaa cacgtcgacc atggtgccgg gatcgaggcc
     1861 gaacgcctcg cccaccacca gcgcctcgca gagcgcgacc agcccggctg cagacaggta
     1921 gttgttgagc gccttcatgg catggcccgc gcccgccgcg ccgcagagc
//
LOCUS       DASWGA010000262         3441 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1929582, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000262 DASWGA010000000
VERSION     DASWGA010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1929582"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VF991_06440"
     CDS             <1..255
                     /locus_tag="VF991_06440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556114.1"
                     /translation="GNTQFMTVDFDAIADLRCRTAYHSIQTSWALSDNQLDGLNAMGE
                     ALLAQDPAFAAAMRAVNAQPLAQPLTTVPQACAVLAKPAG"
     gene            complement(261..1118)
                     /locus_tag="VF991_06445"
     CDS             complement(261..1118)
                     /locus_tag="VF991_06445"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX9556115.1"
                     /translation="MSRARSALFGLAYLVLLCAMACVQLCEARAQSPTLTISDRDSKK
                     TYSRQDLLAHRALRDITIADPVYGRSMTYRAIPIADLLKDMKIGADDYVQARATDNFS
                     IGIPGRLLGSANTARAEAFLAVEDPAAPWPVLAKSRAKLTAGPFFIVWRLEPSAHISR
                     EYWAYQLAALTVTDSPLKRWPGLAVAANVSAADPIRTGLDRYVEHCISCHRFNGEGEG
                     EQGPDLGRPMNPVEYFQIAALKKLIRNPSSVRKWPEQKMPLFDESNLSDSDLDAVIAW
                     LAYKARQSR"
     gene            complement(1115..2233)
                     /locus_tag="VF991_06450"
     CDS             complement(1115..2233)
                     /locus_tag="VF991_06450"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX9556116.1"
                     /translation="MTTATTIVELRSTLLQVPWRGKPPAAGILSAPFRDIYVLEIETQ
                     GGLLGMSYLMPLRGGLHTLDACMKELIAPHVIGRDATEIEAIWQTLYRSNFWLGRMGV
                     TVFAQSAVDMALWDILGKRAGLPLFRLWGAARTEVPAYGSGVFRGLGRDGMIARAKEF
                     TAQGLKAIKMQVAHIRPWREDVQNVKAMREAMGGDIEIMIDVNMGWDADTAIQAGHRI
                     DEFDPYWLEEPVVAEDFAGYRRIAAALKTRIVGGESHFTRNDLRPFFETPCVPILQPD
                     PMRGGYSELRKIAAAAEPWGIRLAPHLFHETMVHLLAAIPNASYLEYMDWNDDLWIEP
                     VLPSKTGTMSPPERPGHGLAFRPEILKDCRIGGQRIKP"
     gene            2278..>3441
                     /gene="cimA"
                     /locus_tag="VF991_06455"
     CDS             2278..>3441
                     /gene="cimA"
                     /locus_tag="VF991_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HEX9556117.1"
                     /translation="MTSSNRVYLFDTTLRDGAQTQGVDFTVADKVAIARELDLLGVDY
                     IEGGWPGANPTDDRFFADPPAFKNAKFVAFGMTRRAGRSAANDPGLAAILQTKARNVC
                     MVGKTWDFHVDVALEVDRTEYLEMISDSLAYAKGRMDEVMFDAEHFFDGYKANPDYAM
                     ACLAAADKAGARWLVLCDTNGGTLPHEVERIVGEVAKKIPGDRLGIHTHNDTENAVAN
                     TLAAVRAGVRQVQGTINGLGERCGNANMIALIPNLVLKMGFDSGLKDGALQRLTHLSR
                     LLDDRLNVVPNRSAAYVGPRAFAHKGGLHVSAVEKDPKTYEHVDPEVVGNQRVIVVSD
                     QAGRSNIMARFRQIGLEVDPKDPGVARLLEIVKEREAEGYAYDGADASFELLAR"
BASE COUNT          590 a         1122 c         1145 g          584 t
ORIGIN      
        1 ggcaacacgc agttcatgac cgtggacttc gacgccatcg ccgacctgcg atgccgcacc
       61 gcgtatcaca gcatccagac gagctgggcg ctgtcggaca accagcttga cggtctgaac
      121 gccatgggcg aggcgttgct ggcccaggat cccgcctttg ccgcggcgat gcgggcggtc
      181 aatgcgcagc cgctcgccca gccgctgacg acggtccctc aagcctgcgc ggtgctcgcg
      241 aaaccggcag gctgaggcgg ctaccgcgac tgtcgggcct tgtaggcgag ccacgcgatc
      301 acggcgtcga ggtcactgtc gctgaggttc gactcgtcga agaggggcat cttttgctcg
      361 ggccatttcc ggacagacga cggattgcgg atgagtttct tcaacgctgc gatttggaaa
      421 tactcgacgg ggttcatcgg ccgaccaaga tcgggtcctt gctcgccctc gccctcgccg
      481 ttgaagcgat ggcacgagat gcagtgctcg acgtagcgat cgaggccggt gcggatcgga
      541 tcggccgccg aaacgttggc ggcgacggca aggccgggcc agcgtttcaa gggactgtcg
      601 gtaacggtga gggctgcgag ctgataggcc cagtactcgc ggctgatatg ggccgacggc
      661 tcgaggcgcc agacgatgaa gaagggcccg gcagtcaatt tcgcgcggct cttggcgaga
      721 acaggccacg gcgccgcggg atcctccacg gcaaggaagg cctccgctcg cgccgtgttc
      781 gcggagccga gcagccggcc cggaatgccg atcgaaaaat tgtcggttgc ccgcgcctgc
      841 acgtagtcgt cggcgccgat cttcatgtcc ttcaaaagat cagcgatcgg tatggcgcgg
      901 taggtcatcg agcggccata gaccggatcg gcaatcgtga tatcgcgtag ggcgcgatga
      961 gctagcaaat cttgccggct ataggttttc ttcgaatccc tgtcggagat ggtgagggtc
     1021 ggtgactgtg cgcgggcttc gcagagctgg acgcaagcca tggcgcatag caggaccaaa
     1081 taggcgaggc cgaacaaagc ggatcgtgct ctgctcatgg cttgatcctc tgcccgccga
     1141 tccggcagtc cttcaagatc tcgggccgga aggccagccc atgccccggc cgctcgggcg
     1201 gagacatcgt gccggtcttc gagggcagca ccggctcgat ccagagatcg tcgttccaat
     1261 ccatgtattc gaggtagctg gcgttgggga tcgcggccag cagatggacc atggtctcgt
     1321 ggaagaggtg cggggccagc cgaatgcccc acggctcggc ggcggcggcg atcttgcgca
     1381 gctcgctgta gccgccgcgc atcgggtcgg gctgcaggat gggcacgcat ggcgtctcga
     1441 agaagggccg cagatcgttg cgcgtgaaat ggctttcgcc gcccacgatc ctggttttca
     1501 gcgcggcggc gatgcggcgg tagccggcga agtcctcggc gaccaccggc tcctccagcc
     1561 agtagggatc gaactcgtcg atgcgatggc cggcctggat ggcagtgtcg gcgtcccagc
     1621 ccatgttgac gtcgatcatg atctcgatgt cgccgcccat cgcctcgcgc atcgccttga
     1681 cgttctgcac gtcctcgcgc catggcctga tatgcgccac ctgcatcttg atggccttca
     1741 ggccttgcgc ggtgaattcc ttggcgcgcg cgatcatgcc gtcgcggccc agcccgcgga
     1801 acacgccgga cccgtaggcc gggacttccg tgcgcgcggc gccccacagc ctgaacagcg
     1861 gcaggccggc ccgcttgcct aaaatatccc acagcgccat gtcgaccgcg ctctgcgcga
     1921 acaccgtgac gcccatgcgg cccagccaga agttgctgcg atagagcgtc tgccagatcg
     1981 cttcgatctc ggtggcgtca cggccgatca cgtgcggcgc gatcagctcc ttcatgcagg
     2041 cgtcgagcgt gtgcaggccg ccgcgcagcg gcatcaggta gctcatgcct aaaagtccgc
     2101 cctgggtctc gatctcgagc acgtagatgt cgcggaacgg cgcggagagg atgccggcgg
     2161 ccggcggctt gccgcgccac ggcacctgca gcagggtgga gcgcagctcg acgatggtgg
     2221 tggccgtggt cataaggcgt atctcccgcg tctttgccca actatgatgc cgctgtcatg
     2281 acttcgtcca accgcgtcta tctcttcgac accaccctgc gagacggcgc ccagacccag
     2341 ggcgtcgatt tcaccgtggc ggacaaggtc gcgatcgcgc gcgagctcga cctgttaggc
     2401 gtcgactaca tcgagggcgg ctggccgggc gccaatccga ccgacgaccg cttcttcgcc
     2461 gatccgccgg cgttcaagaa cgccaagttc gtggccttcg gcatgacccg gcgcgccggg
     2521 cgaagtgcgg ccaacgatcc ggggcttgcc gccatcctgc agaccaaggc gcgcaacgtc
     2581 tgcatggtcg gcaagacctg ggacttccat gtcgacgtgg cgctcgaggt cgatcgcacc
     2641 gaatacctcg agatgatttc cgattcgctg gcctatgcga agggccgcat ggacgaggtg
     2701 atgttcgacg ctgagcattt cttcgacggc tacaaggcca atcccgacta tgcgatggcc
     2761 tgccttgccg cggccgacaa ggcgggcgcg cgctggctgg tgctgtgcga taccaacggc
     2821 gggaccctgc cgcacgaggt cgagcgtatc gtcggcgaag tcgccaagaa gatccccggc
     2881 gatcgccttg gcatccacac ccacaacgac accgagaatg ccgtcgccaa cacgctggct
     2941 gcggtgcgcg ccggcgtgcg ccaggtgcag ggcacgatca acggcctggg cgagcgctgc
     3001 ggcaacgcca acatgatcgc tctgattccc aacctcgtcc tgaagatggg cttcgacagc
     3061 ggcctgaagg acggcgcgct gcagcggctg acgcatctct cgcgcctgct cgacgaccgg
     3121 ctgaatgtcg tgcccaaccg cagcgccgcc tatgtcggcc cgcgcgcctt cgcccacaaa
     3181 ggcgggctgc acgtctcggc ggtcgagaag gatcccaaga cctacgagca tgtcgatccc
     3241 gaggtcgtcg gcaaccagcg cgtcatcgtc gtcagcgacc aggccggccg ctccaacatc
     3301 atggcgcgct tccgccagat cgggctcgag gtcgacccca aggacccggg ggtcgcgcgg
     3361 ctgctggaga tcgtcaagga gcgcgaagct gagggctacg cctatgacgg cgccgacgcc
     3421 tccttcgagc tgttggcccg c
//
LOCUS       DASWGA010000263         4157 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1802729, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000263 DASWGA010000000
VERSION     DASWGA010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4157
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1802729"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1426
                     /locus_tag="VF991_06460"
     CDS             <1..1426
                     /locus_tag="VF991_06460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9556118.1"
                     /translation="TILPPAAAIARTREVTKEGTAALMKNSAVANVVSFSGFDLLSRA
                     LKTNSGISFVTLKDWSVRKDPKEDARNLAPALSALNANFRDGIVIGFNPPPIQGISVT
                     GGFEFYLQDRSGGSLDSLSEAANKVVQAANRRPELRGVSTTFTTAVPQYRTDVDREKA
                     RALGIPINAIFDTMQSSFGSLYVNDFSLFGRTYRVSLSSEADFREKPDDLRHVFVRSD
                     TGAMVPLNELVSFKRILGPDAVDRFNIFPAAKILGSPAPGYSSGQAIAAMQQVVATTV
                     SSDFSIGWTGSAYQELATAGTGSLGFVFGLIMVFLILAAQYERWSLPLAVLTAVPFAV
                     LGALLAIWLRGLDNDVYFQIGLVTLIGLAAKNAILIVEFASQRHRQGRSVYDAAMEAA
                     RLRFRPIVMTSLAFILGVLPLAVSTGAGSASRHSIGTGVIGGMLVATFIAILFVPLFF
                     SLLTRRRVGTREAAMLAKESDKSA"
     gene            1486..3021
                     /locus_tag="VF991_06465"
     CDS             1486..3021
                     /locus_tag="VF991_06465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556119.1"
                     /translation="MLAAAAGFSGVSGVPALARAQTGAPRRGGTLRVSVDQAASVIHP
                     LRTRVNPEHMVAELCYSNLTTLTNDMSPLPDLAESWTANTDFTEWTFKLRKGVRFSDG
                     SPCTAKDVAATFVAILDPKTAAPARAIVSVIKEAVAVDDETALFRLHTPFADLPATMA
                     YNATRIIPAAIAQGDLGRLSRESIGTGPFKLVSYEPDRLIVVARNEHYFMPGQPYVDR
                     VEIRVYPDNSAETSALLAGDNDLMVITAQSEFGRLQGVRGVDAMQVPSGQFLNVNMAC
                     DAKPFNDLRVRKALSLCVDREALVGFVALGAGKPGDDVPVNSIYRFWKKQTPKKPDIA
                     EAKRLLAEAGYPNGIDLALIASDNPGTRTQLAVALREMAKPAGFRITVQTMPHAAYLD
                     QVWKKGPFYIGFYNTQQTVDGVFTLLYTSDAAWNETRWNNKAFDELVAEGRRTADEAR
                     RTEIYGKAQDMMYAETPSIIPIFFDLQGGKRSYVKGYALHPRGHIFRFERVWLDEGAP
                     KRG"
     gene            3042..3989
                     /locus_tag="VF991_06470"
     CDS             3042..3989
                     /locus_tag="VF991_06470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556120.1"
                     /translation="MSLAWLLRRLLTVLYTLLVVSILVFGLTQILPADAAVTLLGENA
                     TPEALAAVRQRLGLGDPAWLQYWHWLSGLLQGDFGTSMRTDQPVGPAMFTALGRSLML
                     GGCSLMLMLVIAVPLGMWAALRRGKAADVVSSLISYLGVSLPEFVTATLLLIVVADRL
                     KLLPATGYVAPGENLVESIRHLILPVLTVSLILVAHVSRMVRSETIDVLNSDYIRAAR
                     LKGLPPRIVLLRHVLRNALLPTITIVALDVGYLLGGIIVVEEIFAIPGIGRQIIVAIT
                     TRDLPSIQAGAVIMAATYAIANTLADIAYVLIDRRIRYD"
     gene            3982..>4157
                     /locus_tag="VF991_06475"
     CDS             3982..>4157
                     /locus_tag="VF991_06475"
                     /inference="COORDINATES: protein motif:HMM:NF024313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556121.1"
                     /translation="MTDTLHRLLRTPQGVLGLALLAVLLLVCLFGGALAPYSPETMDF
                     AGRFAAPGAPHWFGA"
BASE COUNT          635 a         1475 c         1332 g          715 t
ORIGIN      
        1 gacgatcctg ccgcccgccg ccgcgatcgc gcgcacccgc gaggtgacga aggagggcac
       61 ggcggcgctg atgaagaact cggccgtcgc caacgtcgtc tccttctccg gcttcgacct
      121 cttgtcgcgg gcgctcaaga ccaattccgg catctccttc gtcacgctga aggactggtc
      181 ggtgcgcaag gatcccaagg aggacgcgcg aaacctggcg ccggcgctca gcgcgctcaa
      241 cgccaacttc agggacggca tcgtgatcgg cttcaatccg ccgccgatcc agggcatcag
      301 cgtcaccggc ggcttcgaat tctatctgca ggaccgctcg ggcggctcgc tcgacagcct
      361 gtcggaggcg gcgaacaagg tggtccaggc ggccaaccgg cgacccgagc tgcgcggcgt
      421 ttccaccacc ttcacgacgg cggtgccgca gtaccgcacc gacgtcgacc gcgagaaggc
      481 gcgcgccctc ggcatcccga tcaacgccat cttcgacacc atgcaaagct cgttcggcag
      541 cctctatgtc aacgacttct cgctgttcgg ccggacctat cgcgtcagcc tgtcgtccga
      601 ggccgatttc cgcgagaagc cggacgacct gcggcatgtc ttcgtgcgct ccgacaccgg
      661 cgccatggtg ccgctgaacg agctggtgag cttcaagcgc attctggggc ccgacgcggt
      721 cgatcgcttc aacatcttcc cggcggccaa gatcctcggc agcccggcgc cgggctactc
      781 gtcgggccag gcgatcgccg ccatgcagca ggtcgtggcg acgacggtca gcagcgactt
      841 cagcatcggc tggaccgggt cggcctacca ggagctggcg acggcgggca ccggctcgct
      901 gggcttcgtc ttcggcctga tcatggtgtt cctgatcctg gccgcgcagt acgagcgctg
      961 gtcgctgccg ctcgccgtcc tcaccgcggt tcccttcgcc gtcctgggcg ccttgctcgc
     1021 catctggctg cgcgggctgg acaacgacgt ctacttccag atcgggctgg tgacgctgat
     1081 cgggctggcg gcgaagaacg ccatcctgat cgtcgagttc gcctcgcagc gccatcggca
     1141 gggacgctcg gtctatgacg ccgccatgga agccgcccgg ctgcgctttc gaccgatcgt
     1201 catgacctcg ctcgccttca tcctcggcgt gctgccgctg gccgtcagca ccggcgcggg
     1261 ctcggccagt cgccattcga tcggcacggg cgtgatcggc ggcatgttgg tcgcgacctt
     1321 cattgccatc ctgttcgtgc cgttgttctt cagcctgctg accagaagaa gggtcggaac
     1381 gcgtgaggcc gccatgcttg caaaggagag cgacaagagc gcctgaacgg gtctaaatgc
     1441 aggcaaacaa acttgggggt ttcggtgcgg ctaactcggc gattgatgct ggctgcggca
     1501 gccggtttct caggggtgtc gggcgtcccg gcgctggcac gggctcaaac aggtgcgccg
     1561 cgtcgcggcg gcacgttgcg cgtctcggtc gaccaggcgg cgagcgtcat ccatcccctg
     1621 cgcacccggg tcaatcccga gcacatggtg gccgagctct gctacagcaa cctcaccacg
     1681 ctcacgaacg acatgagccc gctgcccgac ctcgccgagt cgtggacggc caatacagac
     1741 ttcaccgaat ggacttttaa gctgcgcaag ggcgtgcgct tctccgacgg ctcgccctgc
     1801 acggccaagg acgtcgcggc cactttcgtc gccatcctcg atcccaagac cgcggcgccc
     1861 gcccgcgcca tcgtttcggt gatcaaggag gcggtcgccg tcgacgacga gaccgcgctg
     1921 ttccgcctgc acacgccgtt cgccgacctg ccggcgacca tggcctacaa cgccacgcgc
     1981 atcattcccg ccgccatcgc ccagggcgac ctcggccggc tgtcgcgcga atcgatcggc
     2041 accggaccgt tcaagctggt gtcctacgaa cccgaccggc tgatcgtggt ggcgcgcaac
     2101 gagcactatt tcatgccggg ccagccctac gtcgatcgcg tcgagatccg cgtctatccc
     2161 gacaattcgg ccgagacctc ggctctgctg gccggcgaca acgacctgat ggtgatcacc
     2221 gcgcaaagcg agttcggccg cctgcagggc gtgcgcggcg tcgacgccat gcaggtgccg
     2281 tcgggccagt tcctgaacgt caacatggcc tgcgacgcca agccgttcaa cgacctgcgc
     2341 gtgcgcaagg ccctttcgct gtgcgtcgac cgcgaggcgt tggtcggctt cgtggcgctc
     2401 ggcgccggca agcccggcga cgacgtgccg gtgaattcga tctaccgctt ctggaagaag
     2461 cagacgccca agaagcccga catcgccgag gccaagcgcc tgctggccga ggcgggttat
     2521 cccaacggca tcgacctcgc gctgatcgcc tccgacaatc ccggcacgcg cacccagctc
     2581 gccgtcgccc tgcgcgagat ggccaagccg gccggctttc gcatcaccgt gcagaccatg
     2641 ccgcacgccg cctacctcga ccaggtgtgg aagaagggcc cgttctacat cggcttctac
     2701 aacacccagc agaccgtcga tggcgtgttc acgctgctct acacctcgga cgccgcctgg
     2761 aacgagacgc gctggaacaa caaggcgttc gacgagctcg tcgccgaagg ccggcgcacc
     2821 gccgacgagg ccaggcggac cgagatctac ggcaaggcgc aggacatgat gtatgccgag
     2881 acgccctcga tcattccgat cttcttcgac ctccagggcg gcaagcgctc ctacgtgaag
     2941 ggctacgccc tgcacccgcg cggccacatc ttccgcttcg agcgggtctg gctcgacgaa
     3001 ggcgccccca agcgcggcta gacgggcagg gacagacgca agtgtcgctc gcctggctgc
     3061 tgcggcgcct gctgacggtc ctctacacct tgctcgtcgt gtcgatattg gtgttcgggc
     3121 tgacccagat cctgccggcc gacgccgccg tgaccctcct gggcgagaac gccacgcccg
     3181 aggcgctggc cgccgtgcgc cagcggctgg gccttggcga tcccgcctgg ctgcaatact
     3241 ggcactggct gtcgggcctg ctgcagggtg atttcggcac ctcgatgcgc accgaccagc
     3301 cggtcggacc ggcgatgttc accgctctcg gccgctcgct gatgctgggc ggctgctcgc
     3361 tgatgctgat gctggtaatc gccgtaccgc tcggcatgtg ggccgcgctc aggcgcggca
     3421 aggcggccga cgtggtgtcc agcctgatct cctacctcgg ggtgtcgctg cccgagttcg
     3481 tcacggcgac tctgctgctg atcgtggtcg ccgaccgatt gaaactcctg ccggcgaccg
     3541 gctacgtggc gccgggcgag aatctggtcg agtcgatccg ccatctcatc ctgccggtgc
     3601 tgacggtgtc gctgatcctg gtggcgcatg tctcgcgcat ggtgcgctcg gagacgatcg
     3661 acgtgctgaa cagcgactac atccgcgcgg cgcggctgaa aggcctgccg ccgcgcatcg
     3721 tgctgctgcg ccacgtgctg cgcaatgcgc tcctgcccac catcaccatc gtggcgctcg
     3781 atgtcggcta cctgctgggc ggcatcatcg tggtcgagga gatcttcgcc atccccggca
     3841 tcggccggca gatcatcgtc gccatcacca cgcgcgacct gccgtcgatc caggcgggcg
     3901 cggtgatcat ggcggcgacc tatgccatcg ccaacacgct ggccgacatc gcctacgtcc
     3961 tgatcgaccg gcgcatccgc tatgactgat accctgcacc gcctgctgcg cacgccgcag
     4021 ggcgtgctgg gactggcgct gctggccgtg ctgctgttgg tctgcctgtt cggcggcgcg
     4081 ttggcgcctt attcgcccga gaccatggac tttgccggcc gcttcgccgc cccgggcgcg
     4141 ccgcactggt tcggcgc
//
LOCUS       DASWGA010000264         1878 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_918508, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000264 DASWGA010000000
VERSION     DASWGA010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918508"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VF991_06480"
     CDS             complement(<1..874)
                     /locus_tag="VF991_06480"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9556122.1"
                     /translation="MSATDVVRSIRTGDMRAEAYAGKLVLRCEAAGALNAISWINPAQ
                     VLSDARSVDQARARGERLGALAGLPLLIKDNIDTVGFPSSAATPALKANLPTKNAPVI
                     DRLLAEGAIVLAKANMAELALSATSSESVFGSVHNPYNPSRFAGGSSGGTAAGIAARL
                     APAGLGTDTAGSGRIPAAFCGVVGFRPTTQPKRVYPQGGIVPLALLLDTVAPMARTAE
                     DVALLHAVLAAESAAPPLPLAGVRLGIARRFLWDDLEPEVARVTDEAIARLSDAGVVF
                     VEVDLAEIPEASWSL"
     gene            1123..>1878
                     /locus_tag="VF991_06485"
     CDS             1123..>1878
                     /locus_tag="VF991_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9556123.1"
                     /translation="MTDYSSYKCLKVEVAAKLATVTFNRPEAHHAMNQDFIAELRHIW
                     FDLAEDTAVNAVLLRSSGRFFSVGGDVKAMSHRPGGDFLKEGEMADPARGRRLVFNLL
                     ELDKPIVCAIQGDAIGLAATIALLCDITVASEAARIGDPHARIGLVAGDGGAAIWPLL
                     VGISRAKEFLMRGSLIKGKDAERIGLVNYALPAEQVLPKATEIAQELADGATWAIRWT
                     KLSVNRILKQNMHMILDASMALEHETMHMQDHRE"
BASE COUNT          324 a          650 c          606 g          298 t
ORIGIN      
        1 gcagggacca gctcgcctcc gggatctcgg cgagatcgac ctcgacaaac accacgccgg
       61 catcgctgag ccgcgcgatc gcctcatccg tcacgcgcgc gacctccggt tccagatcgt
      121 cccacaggaa ccgccgggca atgcccaatc gcacgccggc aagcggcagc ggcggtgcag
      181 ccgactccgc ggccagcacg gcatgaagca gcgccacgtc ctctgccgtc cgcgccatgg
      241 gcgcgacggt gtcgagcagc agggccagcg gcacgatgcc gccttgggga tagacgcgct
      301 tgggctgcgt cgtcggtctg aagcccacca cgccgcaaaa cgccgccgga atgcggccgg
      361 accccgccgt atccgttccg agacccgccg gtgcgagccg cgcggcaatg cctgccgccg
      421 tgccgccgct ggagccgccg gcgaagcggc tgggattgta gggattgtgg acggagccga
      481 agacggattc gctcgacgtg gcactcagcg ccagctcggc catgttcgcc ttggccagca
      541 cgatcgcgcc ctcggccagc agccggtcga tcaccggtgc gttcttcgtg ggaagattgg
      601 ccttcagggc gggcgttgcc gccgagctcg ggaatcccac ggtgtcgata ttgtccttga
      661 tcagcaacgg cagcccggcg agcgcaccga gcctctcccc ccgtgcccgc gcctggtcga
      721 cagaacgggc atcgctcaac acctgcgccg ggttgatcca actgatcgcg ttcagggcgc
      781 cggccgcctc gcaacgcagc accagcttgc ccgcataggc ttcggcccgc atgtcgccgg
      841 tgcgaatcga ccggaccacg tcggtcgccg acatttccag gaagcggtcg gcgctgtcgg
      901 ctttggcggg ccacgccgac accatcgacg caccgaggcc agaggtgatg gcgcgcagac
      961 aggttcgtct tttcatcata aagtcctccc gttcctcctt attggtatga ccattatgaa
     1021 cagccaccat tcgcaatgca atatggaagg cattcgtgtc ttgaaagttt tggtcagacc
     1081 tttataagag cgatcctgat ctgccgcgag ggagccgtcc ggatgaccga ctattcgagc
     1141 tacaagtgcc tgaaggtcga ggtcgccgcc aagctggcga cggtgacctt caaccggccc
     1201 gaggcgcacc acgcgatgaa ccaggacttc atcgccgagc tgcgccacat ttggttcgac
     1261 ctcgccgagg acactgcggt gaacgccgtg ctgctgcgca gctcgggtcg cttcttcagc
     1321 gtcggcggcg acgtcaaggc gatgtcgcac cggcccggcg gcgacttcct caaggagggc
     1381 gagatggccg atccggcgcg cggccggcgg ctggtcttca acctgctcga gctcgacaag
     1441 ccgatcgtct gcgccatcca gggcgacgcg atcgggcttg ccgccacgat cgcgctgttg
     1501 tgcgacatca cggtggcgtc cgaggccgcc cgcatcggcg atccgcatgc ccgcatcggg
     1561 ctggtggcgg gcgacggcgg cgcggcgatc tggccgctgc tggtcggcat ttctcgcgcc
     1621 aaggaattcc tcatgcgcgg ctccctgatc aagggcaagg acgccgagcg gatcggcctg
     1681 gtgaactacg cgttgccggc ggaacaagtc ctgcccaagg cgacggagat cgcccaggaa
     1741 ctcgccgacg gcgccacctg ggccatccgc tggaccaagc tctcggtcaa ccgcatcctc
     1801 aagcagaaca tgcacatgat cctcgacgcc tcgatggcgc tcgagcacga gaccatgcac
     1861 atgcaggacc atcgcgag
//
LOCUS       DASWGA010000265         4691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_788848, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000265 DASWGA010000000
VERSION     DASWGA010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4691
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_788848"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..542)
                     /locus_tag="VF991_06490"
     CDS             complement(<1..542)
                     /locus_tag="VF991_06490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010659343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEX9556124.1"
                     /translation="MRVGVPKEIKDHEDRVGLVPSSVNELVHHGHEVLIERDAGLGAG
                     LTDDQYLAAGARIAADAAEVFSSSELIVKVKEPLASERKRLHRGQMLFTYLHLAPDPE
                     QTLDLLASGVTAIAYETVTSPSGGLPLLTPMSEIAGRLAPQVGARYLERTSGGRGVLL
                     GGVPGVPPAEVVVLGGGVSGT"
     gene            complement(551..1717)
                     /gene="ribA"
                     /locus_tag="VF991_06495"
     CDS             complement(551..1717)
                     /gene="ribA"
                     /locus_tag="VF991_06495"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: protein motif:HMM:NF001591.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEX9556125.1"
                     /translation="MTPGQILSRTAAALAAVERALAELRRGGIVVLRDDDGAGGLVIA
                     AEACGPRALQRLQGLAQDAPVLVTTRRRAEAIGMEIPPHIAGGMGEINKPITLDLPEG
                     VPVDIILRPHESDPQASRHVALRHLSRPVASHAPRIAETAIELAKLARLLPAVVLGPL
                     SGDPRNKRRDWAREQDLIYVNVADVLSYEDTASRNLQQVAQAHVPLEGAENARILAWR
                     PSDGGKEHLAIVVGEIDPTEPVLIRLHSECFTGDLLGSLRCDCGVQLRGAIVEIAKRG
                     SGVLLYLAQEGRGIGLVNKLRAYELQDDGFDTIDANEQLGFDADERIYAPAATMLARM
                     GIKRVRLMTNNPQKISQLERYGIEVAERVAHSFPANGHNENYLRTKAERAGHLL"
     gene            1823..2521
                     /locus_tag="VF991_06500"
     CDS             1823..2521
                     /locus_tag="VF991_06500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018901915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9556126.1"
                     /translation="MSVNNRGKKILLVDDDQALRTVLAEQLDLYDSFTTIQVGTAAEG
                     LERAKLAHYDAILLDIGLPDMDGRELCKLMRRQGVRSPVIMLTAADSDADTILGLESG
                     ANDYVTKPFRINVLLARLRAHLRQHERSEDAVMTIGPYEFHPAAKMLTEKGGKKKIRL
                     TDKEASILKYLFRAGDRPVARDVLLNEVWGYNAGVTTHTLETHIYRLRQKIEKDPASA
                     VILITDRGGYRLQP"
     gene            2595..3662
                     /locus_tag="VF991_06505"
     CDS             2595..3662
                     /locus_tag="VF991_06505"
                     /inference="COORDINATES: protein motif:HMM:NF023015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX9556127.1"
                     /translation="MSTQRLYALPVDVTQWKFDGATEIQFNWEYDDGSDALLELYDKG
                     KKQQWDASTRLDWSLALNPDNPMELKDEAISIYETDYWRRMTEKERSWLRRNLQANSI
                     SQFMHGEQGALIATAKIVTTVPDMNAKFYAATQVMDEARHVEAYKRLLHEKFELAYPI
                     NKALKTLLEQTLTDRRWDMTYLGMQVLIEGLALAAFQSIRDKAGNTLAGAVNAYVMQD
                     EARHVSFGRLALREYYPQLSDAERDEREEFVVEALHFMRDRFNQSEVWERLGLPAKVL
                     DDIHYNSKQMSSFRGRLFSRVVPTVKDIGLWGERVRQAFGEMGVMEYADINVTEQLAN
                     DGKVAEDFDKKMFVQKAIAAE"
     gene            3745..4359
                     /locus_tag="VF991_06510"
     CDS             3745..4359
                     /locus_tag="VF991_06510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556128.1"
                     /translation="MLTLLRRAVVVSTLALACAAPPLLAQETVRVRGTIEGMDGALYV
                     VKTRDGEKVKVAVTDKPLFVAMVKASMADIKPGMFVGSTAMPGPDGSLSAVEVHIFPE
                     AMRGTGEGHRPWDLKPQATMTNANVEAAVAGVNGQTLTMKYKDGEKTLVVAPETVVVT
                     YAPGDKAELKPGTGIFIAAAEKKPDGTLQTARITYGKDGLTPPM"
     gene            complement(4364..>4691)
                     /locus_tag="VF991_06515"
     CDS             complement(4364..>4691)
                     /locus_tag="VF991_06515"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HEX9556129.1"
                     /translation="GNDAVPIEPPEEGDVIPSEITVHFEGKVHKVPYRKGLSILEAAR
                     AAGLNPLSSCEEGFCASCAAKRIKGKIVLAKNDIYTPDDLANNWILTCQGHCFGPEVE
                     ITYDVV"
BASE COUNT          825 a         1530 c         1580 g          756 t
ORIGIN      
        1 gtgcccgaca cgccgccgcc cagcaccacg acttcggccg gcggcacgcc cggcacgcca
       61 cccaaaagca cgccgcgtcc acccgacgta cgctcgagat agcgcgcgcc gacctgaggt
      121 gccaggcggc cggcgatctc cgacatcggc gtgagcagcg gcaggccgcc cgagggcgag
      181 gtgacggtct cgtaggcgat ggccgtgacg ccgctggcca gcaggtccag cgtctgctcg
      241 ggatcgggcg cgaggtgcag gtaggtgaag agcatctgtc cgcgatgcag gcgcttgcgc
      301 tcggaggcca gcggctcctt gaccttcacg atcagttcgc tcgacgagaa gacctcggcg
      361 gcgtcggcgg cgatgcgggc gccggcggcg agatactggt cgtcggtgag cccggcgccc
      421 agcccggcgt cgcgctcgat cagcacctca tggccgtgat gcaccagctc gttgaccgac
      481 gacggcacca gcccgacgcg gtcctcgtgg tccttgattt ccttcggaac gccgacgcgc
      541 atggtcgttg tcagagcaag tggccggcgc gctcggcttt ggtgcgcagg tagttttcgt
      601 tgtggccgtt ggccgggaag gaatgggcga cgcgctcggc gacttcgatg ccgtagcgct
      661 cgagctggct gatcttctgc gggttgttgg tcatcagccg cacgcgcttg atgcccatgc
      721 gcgccaacat ggtggcggcg ggcgcataga tgcgctcgtc ggcgtcgaag cccagctgct
      781 cgttggcgtc gatggtgtcg aagccgtcgt cctgcagctc gtaggccctg agcttgttga
      841 ccaggccgat gccgcggcct tcctgggcga gatagagcag cacgccggag ccccgcttgg
      901 cgatctcgac gatggcgccg cgcagctgca cgccgcagtc gcagcgcagc gaccccaaaa
      961 gatccccggt gaaacattcc gagtggaggc ggatcagcac cggttcggtc ggatcgatct
     1021 cgccgacgac gatggcgaga tgctccttgc cgccgtcgct cggccgccac gcgaggatgc
     1081 gggcattctc cgcgccttcg agcggtacgt gcgcctgcgc cacctgctgg aggttgcgcg
     1141 aggcggtgtc ctcgtagctc agaacgtcgg cgacattgac atagatcagg tcctgttcgc
     1201 gcgcccagtc gcgccgcttg ttgcggggat cgccgctcaa cggtcccagc acgacggccg
     1261 gcagcaggcg ggcaagcttg gccagctcga tggcggtctc ggcgatgcgc ggcgcgtggc
     1321 tcgccaccgg ccgcgacaaa tggcgcaggg cgacgtggcg gctggcttgc ggatcgcttt
     1381 cgtgcggccg caggatgata tcgaccggca cgccttcggg caggtcgagc gtgatcggct
     1441 tgttgatctc gcccatgccg ccggcgatat gcggcgggat ctccatgccg atcgcctcgg
     1501 cgcggcggcg cgtggtgacc agcaccggcg cgtcctgggc caggccctgc aggcgctgca
     1561 aggcgcgcgg gccgcaggct tcggcggcga tcaccaggcc gccggcgccg tcatcgtcgc
     1621 gtaagacgac gattccgccg cggcgcagct cggccagcgc gcgttcgacg gcggccagtg
     1681 cagcggcggt gcgggacagg atctgacccg gggtcatgcc ttgtcttagc acgatggggg
     1741 gctttttgcc gaagtgaacc acttttgccg ccgcttcgta ccagataagg tatcgcgggg
     1801 cgttcggcag gtaacagcag gcatgtctgt aaacaatcgc ggcaagaaaa ttctgctggt
     1861 cgacgacgac caggcgttgc ggaccgtgct cgccgagcag ctcgacctct atgacagttt
     1921 caccaccatc caggtcggca cggccgccga ggggctggag cgggccaagc tcgcccatta
     1981 cgacgccatc ctgctcgata tcggcctgcc cgacatggac ggccgcgagc tgtgcaagct
     2041 gatgcgccgc cagggcgtgc gctcgccggt catcatgctg accgccgccg actccgacgc
     2101 cgacaccatc ctcggcctcg aatcgggcgc caacgactac gtcaccaagc cgttccgcat
     2161 caatgtcctg ctggctcgcc tgcgcgccca tctgcgccag catgagcgca gcgaagatgc
     2221 ggtgatgacc atcggtcctt acgagttcca ccccgccgcc aagatgctga cggagaaggg
     2281 cggcaagaaa aagatccgcc tgaccgacaa ggaagcctcg atcctgaaat acctgttccg
     2341 cgccggcgac cggccggtcg cccgcgatgt cctgttgaac gaggtctggg gctacaatgc
     2401 cggggtcacc acgcacaccc tggaaaccca catctatcgc ctgcgccaga agatcgagaa
     2461 ggatccggcc agcgcggtca tcctgatcac cgaccgcggc ggctaccggc tgcagccgta
     2521 atgacttgcc agaaggtgac gaaagcgtca tctttttggc aagcaagtaa tcgtttgctc
     2581 gggaaggccc cctcatgagc acgcaacgcc tctacgccct gcccgtcgac gtcacccaat
     2641 ggaagttcga cggggcgacg gagatccagt tcaactggga atacgacgac ggttcggacg
     2701 ccctgctcga gctctacgac aagggcaaga agcagcagtg ggacgccagc acgcggctcg
     2761 actggtcgct cgcgctcaat cccgacaatc cgatggagct caaggacgag gcgatctcga
     2821 tctacgagac cgactattgg cggcggatga ccgagaaaga gaggtcgtgg ctgcgccgca
     2881 acctgcaggc caactcgatc tcgcagttca tgcatggcga acaaggcgct ttgatcgcca
     2941 ccgccaagat cgtcaccacc gtgcccgaca tgaacgccaa gttctatgcc gccacccagg
     3001 tgatggacga ggcgcgccac gtcgaggcct acaagcgcct gctgcacgag aagttcgagc
     3061 tcgcctatcc gatcaacaag gcgctgaaga cgcttttgga gcagaccctg accgaccgcc
     3121 gctgggacat gacctacctc ggcatgcagg tgctgatcga agggctggcg ctggcggcct
     3181 tccagtcgat ccgcgacaag gccggcaata cgctggccgg cgcggtcaac gcctatgtca
     3241 tgcaggacga ggcgcgccac gtctcgttcg gccgcctggc gctgcgcgag tactatccgc
     3301 aactctccga cgccgagcgc gacgagcgcg aggagttcgt ggtcgaggcg ctccatttca
     3361 tgcgcgaccg cttcaaccag tcggaagtct gggagcgcct cggcctgccg gccaaggtgc
     3421 tcgacgacat ccactacaat tccaagcaga tgagctcgtt ccgcggccgg ctgttcagcc
     3481 gcgtcgtgcc gacggtcaag gatatcggcc tgtggggcga gcgcgtgcgc caggcgttcg
     3541 gcgagatggg cgtgatggaa tacgccgaca tcaacgtcac cgagcagctc gccaatgacg
     3601 gcaaggtggc cgaggacttc gacaagaaga tgttcgtcca aaaggcgatc gcggcggagt
     3661 gacgccgcac atcaccgggt agtgatgccg acttgaacgg ccggcgggct aacgtgccgc
     3721 gtcgcgaact cgaggagcat cgccatgctg acattgttgc gccgcgctgt tgtcgtttcg
     3781 actctggcgc tcgcctgcgc cgcaccaccg ctgttggccc aggaaaccgt ccgcgtgcgc
     3841 ggcacgatcg aaggcatgga cggcgcgctg tacgtcgtca aaacccgcga cggcgagaag
     3901 gtgaaagtgg cggtcaccga caagccgctg tttgtggcga tggtcaaggc gagcatggcc
     3961 gacatcaagc ccggcatgtt cgtcggttcg acggcgatgc ccgggcccga cggcagcctg
     4021 agcgcggtcg aggtccacat cttccccgag gcgatgcgcg gcaccggtga gggacaccgt
     4081 ccgtgggatc tcaagccgca ggccacgatg accaatgcca atgtcgaggc ggccgtggcc
     4141 ggcgtgaacg gccagacgct gacgatgaag tacaaggatg gcgagaagac gctggtcgtc
     4201 gcgccggaga ccgtcgtggt gacctacgcg ccgggcgaca aggccgagct gaaacccggg
     4261 accgggatct tcatagcggc ggcggagaag aagccggacg gcacgctgca gacggcgcgc
     4321 atcacctacg gcaaggatgg actcacgccg ccgatgtgag cggctagacc acgtcgtagg
     4381 tgatctcgac ctctggtccg aaacagtggc cctggcaggt caggatccag ttgttggcga
     4441 gatcgtcggg cgtgtagatg tcgttcttcg ccagcacgat cttgcccttg atgcgcttgg
     4501 ccgcgcacga ggcgcagaag ccctcctcgc aggacgacag cggattgagc ccggcggcgc
     4561 gcgccgcctc gaggatgctc agccccttgc ggtagggcac cttgtgcacc ttgccctcga
     4621 aatggacggt gatctcgctc gggatcacgt cgccttcctc gggcggctcg atcggcacgg
     4681 cgtcgttgcc c
//
LOCUS       DASWGA010000266         4945 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2439596, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000266 DASWGA010000000
VERSION     DASWGA010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4945
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2439596"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VF991_06520"
     CDS             complement(<1..400)
                     /locus_tag="VF991_06520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556130.1"
                     /translation="MMDQVVIDYLNPDIPAGLKLLDVPLVRANARSLKGYGEIVRDPK
                     KHRIEIVPWPLAGWRKLDAGTGVEGGTTEGVFACEWRGNQLVGRNDAVGGHYVIGFRD
                     LPEAARPGVKLSDSRVLLWHCNYHPDGGQLF"
     gene            complement(397..1998)
                     /locus_tag="VF991_06525"
     CDS             complement(397..1998)
                     /locus_tag="VF991_06525"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEX9556131.1"
                     /translation="MSQIDRSLAEAARAWPFEEARKLVARTAGKVPAKGYVLFETGYG
                     PSGLPHIGTFGEVVRTTMVRQAFKRLSDVPTRLFCFSDDMDGLRKVPDNVPNKEMLAQ
                     HLGKPLTSVPDPFSNEYPSFGAANNARLRAFLDSFGFEYEFQSATEWYKSGRFDKMLL
                     TMLQHYDEVQAVMLPTLGEERQQTYSVFLPVSPKNGRVLQAPVVRTDPQAGTIVYRDE
                     DGTLVETPVTGGNVKLQWKADWAGRWFALDVDYEMYGKDLIPSAELSAKIVRILGGRP
                     PEGFNYELFLDEEGRKISKSKGNGLSVEEWLRYAPPESLALYMQQQPRRAKRLYFDVI
                     PRAVDDYLAAIEKLPAEEPAKALENAAWHIHDGKSPANSAAGVNFGMLLNLASVAHTE
                     NKDVLWQYLRRYVPGATPESAPYLDRLLSGAVAYYQDFVKASKKFRLPTAKEREALKD
                     LADTLRRLSEESSAEVIQNEVYETGKRHFAQAELRQWFKTLYEVLLGSEQGPRMGAFI
                     KLYGRDNVVRLIERALAGEDLGKAA"
     gene            2069..3262
                     /locus_tag="VF991_06530"
     CDS             2069..3262
                     /locus_tag="VF991_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008195992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfB/YjiJ family MFS transporter"
                     /protein_id="HEX9556132.1"
                     /translation="MNKTPFTLALGGLLALAAAIGIGRFVYTPILPPMVEALQLSKAQ
                     AGLIASANFVGYLAGALVAALSLPGSRRAWLMGSLAVNALCLGAMGVTTALPLFLLLR
                     LVAGIASAFALIFGSALVLDRLASAGRGGLSAVHFAGVGSGIAVSAALVAILVRDGAA
                     WSTLWFASAVLAAIAGLAVLWMVPPELRVAPAAAPTARAKVSADFAALVAAYGLFGFG
                     YIITATFIVDMVRGTAALRPLEPYIWVLFGLSAAPSVALWTGFGRRWGILKTFAVASI
                     VEAAGVAASALWLHALGVIVAALFVGGTFMGLTALGLIAARETADGDPRGRIALMTAS
                     FSFGQILGPAFAGFVYDATGSLAMPSLVAAVALVLAALLSVVAETQRRPSTASASRAA
                     RRPDA"
     gene            complement(3205..4545)
                     /locus_tag="VF991_06535"
     CDS             complement(3205..4545)
                     /locus_tag="VF991_06535"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9556133.1"
                     /translation="MGRRLFLSSLAAGFATPAQAADPDVVIIGAGVAGLAAARTLMAA
                     HKTVLVLEARDRIGGRAFTDSTTFGFPFDHGAQWIEAGKTNPAMAILREANAKPIPDR
                     QEQAIYLSGKEIPQAEYARFEKIAVDASRKIAEALQKPPPMIGPGVVMKPQPDVVIGR
                     VLQPKDPLEQLAYAMIGPLEAGVENAELSARDFTRQPETEPQYSVAEGLGALIARWGA
                     KVPVKTGVRVVRLDSTGSAVAVITTNGQTSARAAIVTVPTGVLAAGPFGFAPALSPAK
                     REAISQLPMALYNKVALSFSRKAIDAPAGRSVTGLKRNGQAFDAIVRPYNQDAALVFL
                     GGAQARQIEDEGTGAAVSFALSAMAEIYGDGLRGLLTRSFATRWGKDPFSRGSWSMAT
                     LGNSDKRLVLAQPHHDRVFFAGEATDPVWATRVGGAYASGLRAAREALAVLGRR"
     gene            4583..>4945
                     /locus_tag="VF991_06540"
     CDS             4583..>4945
                     /locus_tag="VF991_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556134.1"
                     /translation="MASSPQTWPALIATARGALWRAVDGTIERLAAADAAQRAAGSVP
                     LVCHMPAVAARLGLDDLRARDLLQLFAFVRPARFCLPTPRGLCEALDLGVPTTPEEEV
                     ASLPQAARALLDELEDMAA"
BASE COUNT          703 a         1699 c         1688 g          855 t
ORIGIN      
        1 agaagagctg gccgccgtcg ggatggtagt tgcagtgcca caagagcacg cggctatcgc
       61 tgagcttgac gcccggccgc gccgcctccg gcaagtcgcg aaagccgatg acgtaatggc
      121 cgccgacggc gtcgttgcgg cccaccagct gattgccacg ccattcgcag gcgaagacgc
      181 cttccgtcgt tccgccctcg acgcccgtgc cggcatcgag cttgcgccag ccggcaagcg
      241 gccagggcac gatctcgatc cggtgtttct tcggatcgcg cacgatctcg ccgtagcctt
      301 tcagcgacct ggcattggcg cgcaccagcg gcacgtccaa gagcttcagg ccggcgggaa
      361 tgtccgggtt cagatagtcg atgacgacct gatccatcac gccgctttcc cgagatcctc
      421 gccggccagc gcgcgctcga tcaggcgcac gacattgtcg cggccgtaga gttttatgaa
      481 ggcgcccatg cgtgggccct gctcgctgcc caaaagcact tcatagagag tcttgaacca
      541 ctgccgcagc tcggcttgcg cgaaatgacg cttgcccgtc tcgtagacct cgttctggat
      601 gacctcggcc gacgattcct ccgacaggcg acgcagggtg tcggcgaggt cttttagcgc
      661 ctcgcgctcc ttggccgtcg gtagccggaa cttcttcgac gcttttacga agtcctggta
      721 gtaggccacc gcacccgaca gcaggcgatc gagatagggc gcgctctcgg gcgtggcgcc
      781 cggcacgtag cggcgcaggt actgccacag cacgtccttg ttctcggtgt gggccacgct
      841 cgcgagattg agcagcatgc cgaaattgac gccggccgcc gaattggccg ggctcttgcc
      901 gtcatggatg tgccacgccg cgttctccag cgccttggcc ggttcctcgg ccggcagctt
      961 ttcgatcgcc gcgagatagt cgtcgacggc gcgcgggatg acgtcgaaat agagccgctt
     1021 ggcccgtcgc ggctgctgct gcatgtaaag cgccagcgat tcgggcggcg catagcgcag
     1081 ccattcctcg accgagagcc cgttgccctt ggacttggag atcttgcggc cctcctcgtc
     1141 gaggaagagc tcgtagttga agccctccgg cggccggccg cccaggatgc gcacgatctt
     1201 ggcggaaagc tcggccgacg gaatgagatc cttgccgtac atctcgtagt cgacatcgag
     1261 cgcgaaccag cggccggccc agtcggcctt ccactgcagc ttgacgttgc cgccggtgac
     1321 cggcgtctcg accagcgtgc cgtcctcgtc gcggtagacg atggtgccgg cctgaggatc
     1381 ggtcctgacc accggcgcct gcagcacgcg gccgttcttg ggcgacacag gcagaaagac
     1441 cgagtaggtc tgctggcgtt cctcgcccag ggtcggcagc atcaccgcct gcacctcgtc
     1501 gtagtgctgc agcatggtga gcagcatctt gtcgaagcga cccgacttgt accattcggt
     1561 cgccgactgg aactcgtatt cgaagccgaa cgaatcgagg aaagcgcgca ggcgggcatt
     1621 gttggccgcc ccgaagcttg gatactcgtt gctgaaggga tcaggaacgg aagtcagcgg
     1681 cttgccgagg tgctgggcca gcatctcctt gttgggcacg ttgtcgggca ccttgcgcag
     1741 cccgtccatg tcgtcggaga agcagaacag ccgcgtcggg acgtcgctca gccgcttgaa
     1801 cgcctggcgc accatggtgg tgcgcacgac ctcgccgaag gtgccgatat ggggcaggcc
     1861 cgacgggccg tagccggttt cgaacagcac atagcctttc gccggcacct tgccggcggt
     1921 gcgggcgacg agcttgcggg cttcttcgaa cggccacgcg cgcgcggcct ccgcgaggga
     1981 acgatcgatc tgcgacatga atcggcaaag gtaggagcgg cctgcatttg cgtcaatcca
     2041 cgccaaggcc caaagtgccg cgcgcgcaat gaacaaaacc ccttttacac tggctttggg
     2101 cggcctcttg gcgttggcgg ccgccatcgg catcggccgc ttcgtctaca cgccgatcct
     2161 gccgccgatg gtcgaggcgc tgcagctcag caaggcgcaa gccggcctga tcgcctcggc
     2221 gaacttcgtg ggctacctcg ccggcgcgct tgtggccgcg ctcagcctgc ccggctcgcg
     2281 ccgcgcctgg ctcatgggat cgctcgcggt caatgcgctc tgcctgggcg cgatgggcgt
     2341 cacgacggcg ctgccgctct ttcttctgct gcgattggtc gccggcatcg ccagcgcctt
     2401 tgccctgatc ttcggctcgg ccctggtgct cgatcgcttg gcgagtgcag gtcgcggcgg
     2461 gctctcggcg gtacatttcg ccggagtcgg cagcggcatt gcggtctccg ccgccttggt
     2521 cgccatcctg gtgcgcgacg gtgcggcgtg gagcacgttg tggtttgcca gcgccgtgct
     2581 ggcggcgatc gcaggccttg ccgtcctctg gatggtgccg cccgagctgc gcgtcgcgcc
     2641 ggctgccgcg ccgaccgcgc gggcaaaagt ctcggccgac ttcgccgccc tcgtcgcggc
     2701 ctacggcctg ttcggcttcg gctacatcat caccgcgacc ttcatcgtcg acatggtgcg
     2761 cggcaccgcg gcgctgcggc cgctcgagcc ctacatctgg gtgctgtttg ggctgagcgc
     2821 tgcgccctcg gtggcgctat ggaccgggtt cggacggcgc tggggcatcc tgaaaacatt
     2881 cgccgtggcc agcatcgtcg aggccgccgg cgtggcggcg agcgcgctct ggctgcacgc
     2941 gctgggcgtc atcgtcgctg ccctgttcgt cggcggcacc ttcatgggcc tgaccgccct
     3001 cggcctgatt gccgcgcgcg agacggcgga cggcgatccg cgcggccgca tcgcgctgat
     3061 gaccgcctcg ttcagcttcg gccagatcct cggccccgcc ttcgcgggct tcgtctacga
     3121 cgccaccggc agcctcgcca tgccctcgct ggtcgccgcc gtggcgctgg tgctggcggc
     3181 gctgctgtcg gtcgtggcgg agactcagcg acgtcccagc accgccagcg cctcgcgggc
     3241 ggcgcgcagg cccgacgcgt aggcgccgcc gacccgcgtc gcccagaccg ggtcggtcgc
     3301 ctcgccggcg aagaacacgc ggtcatgatg gggctgggcc agcaccaggc gcttgtcgct
     3361 attgccgagc gtcgccatcg accacgagcc gcgcgaaaaa gggtccttgc cccagcgcgt
     3421 ggcgaaggag cgcgtgagca gcccgcgcaa tccgtcgccg tagatctccg ccatcgccga
     3481 gagcgcgaag gagacggccg cacccgtgcc ctcgtcctcg atctggcgcg cctgcgcgcc
     3541 gcccaaaaac acgagcgcgg cgtcttgatt gtagggccgc acgatggcgt cgaaggcctg
     3601 cccgttgcgc ttcagccccg tgacgctgcg tccggccggg gcgtcgatcg ccttgcgcga
     3661 aaatgacagc gccaccttgt tgtagagcgc catcggcagc tggcttatcg cctcgcgctt
     3721 ggcggggctg agcgcggggg caaagccgaa gggaccggcc gccagcacgc cggtcggcac
     3781 ggtgacgatg gcggccctgg cgctcgtctg accgttggtg gtgatcaccg ccaccgcgct
     3841 gcccgtcgaa tcgagccgca cgacccggac acccgttttc accggcacct tggcgcccca
     3901 gcgcgcgatc agggcgccca ggccctcggc cacggaatat tgcggttcgg tctcgggctg
     3961 gcgggtgaag tcgcgcgccg acagctcggc gttctcgacc cccgcctcga gcgggccgat
     4021 catggcgtag gccagctgct ccagcgggtc cttgggctgc agcacgcggc cgatcacgac
     4081 atcgggctgg ggcttcatca ccacgccggg gccgatcatc ggcggcggct tctggagggc
     4141 ctcggcgatc ttgcgcgagg cgtcgacggc gatcttctcg aagcgtgcgt attccgcctg
     4201 cgggatctcc ttgccggata gataaatcgc ctgctcctgg cggtcaggga tgggcttggc
     4261 attggcctcg cgcaggatcg ccatcgccgg attagtcttg ccggcctcga tccattgcgc
     4321 gccgtggtcg aagggaaagc cgaaggtggt gctgtccgtg aaagcacgcc cgccgatgcg
     4381 atcgcgcgcc tcgagcacca gcacggtctt gtgcgccgcc atcaaggtcc gcgccgcggc
     4441 caggcccgcc acgccggcgc cgatgatgac gacgtccgga tcggcggcct gggcgggcgt
     4501 ggcgaagccc gccgccagac tggagaggaa gagacggcgg cccaacgtca tttcgccggc
     4561 attgtatgct atcggactcg aaatggcgtc ttctccgcag acttggcccg ccctgatcgc
     4621 gaccgcgcgc ggggctttgt ggcgcgcggt cgacggcacg atcgagcggc tggcggcggc
     4681 cgatgccgcc cagcgcgcag ccggcagcgt gccgctggtc tgccacatgc cggcggtggc
     4741 ggcgcggctg gggctggacg acctgagggc gcgcgatctt ttgcaactct tcgccttcgt
     4801 gcggccggcg cgtttctgcc tgccgacgcc gcgcggcctt tgcgaggcgc tcgaccttgg
     4861 cgtgccgacg acgccggaag aagaagtggc ctctttgccc caagccgcgc gcgcccttct
     4921 ggatgaactc gaggacatgg cggcg
//
LOCUS       DASWGA010000267         2701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1803114, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000267 DASWGA010000000
VERSION     DASWGA010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2701
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1803114"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..758)
                     /locus_tag="VF991_06545"
     CDS             complement(<1..758)
                     /locus_tag="VF991_06545"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9556135.1"
                     /translation="MTAVLAPTMVRRRPAFSLGRWLERESVFSWLMVAPPVAFLVAMV
                     GYPFFYGIWLSLQNRPVAKAGVFVGLDNFVADWHDPVFRLVVVNTIVYTAAATLLKMV
                     GGLGLALVMNQDFRFKNLTRALLLLPFIVPTVLSTIAWQWILDPAFSVINWALMATGL
                     ANPGPSWLGNPYLAMFSLIMVNTWRGLPFYAITLLAGLQTISPELYEAATIDGASRFD
                     RFRYVTLPLLKPIIFIVTMFSVIFTFADFQLIYVL"
     gene            complement(763..2052)
                     /locus_tag="VF991_06550"
     CDS             complement(763..2052)
                     /locus_tag="VF991_06550"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9556136.1"
                     /translation="MIGRSRQSRRDVLKLTALGAAGTLLGSSGARAAPKSLTMMHESS
                     FVPPYDAYFKNNLASAYEKATGIKINYEVVSVGSLQTRVTTAAENNSGPDMTAIGFNW
                     AFLFDEKFVDVSDIALEIGKEGGGWYESAQEAVVVGGKWKAIPFGNIGQLMNWRTDWF
                     KQAGYDKFPDTWDELLEAGIKLKKAGHPFGFELGHGFGDNHGWLYPLLWSYGGREVEA
                     DGKTIVIDSAETARAIDFCRKFFKETMFEDVLGWTDVNNNKAFLSEQISCTNNAESIL
                     WAAKKDFPDMAKVIDQSENPKGPKGRFHMLNPLCHSIFAHTQDKQAAKDFLRWLMAPK
                     QAGAWYDIAVTYYQPFLHAYDDAPMWKVEPRNLPYRDALKTAHLPGWPAPLSRAQSET
                     VAKFVVVDMFAKACAGKSTKEVIADAQGQLKQIYKQA"
     gene            complement(2249..>2701)
                     /locus_tag="VF991_06555"
     CDS             complement(2249..>2701)
                     /locus_tag="VF991_06555"
                     /inference="COORDINATES: protein motif:HMM:NF015827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HEX9556137.1"
                     /translation="DAKRPDGALMSRASIALVIAACGLAAACLGASAQGQTPPAPQLA
                     NPASVRCVEKGGTLRIERRPDGGQYGVCIFTDNYQCEEWAMFRGECPAGGLRVTGYIT
                     PAARYCAITGGRYTVVANSGAADEQGACALPGGKACEAKAYFAGACSR"
BASE COUNT          467 a          876 c          895 g          463 t
ORIGIN      
        1 aggacgtaga tcagctggaa gtcggcgaaa gtgaagatca ccgagaacat ggtgacgatg
       61 aagatgatcg gctttaagag cggcagggtg acgtagcgga agcggtcgaa gcggctggcg
      121 ccgtcgatgg tcgccgcctc gtagagctcg ggcgagatgg tctgcaggcc ggcgagcagg
      181 gtgatggcgt agaacggcaa gccgcgccag gtgttgacca tgatcagcga gaacatcgcc
      241 agatacgggt tgccgagcca gctcgggccg ggattggcca ggccggtcgc catcagcgcc
      301 cagttgatca cgctgaaggc ggggtcgagg atccactgcc aggcgatggt cgacagcacg
      361 gtcggcacga tgaacggcag cagcaagagc gcgcgcgtca ggttcttgaa acggaagtcc
      421 tggttcatca ccagggcaag ccccaggccg cccaccatct tcaggagcgt cgcggcggcg
      481 gtgtagacga tggtgttgac caccaccaac cggaacaccg ggtcgtgcca atcggcgacg
      541 aaattatcga ggccgacgaa cacgccggcc ttcgccaccg gccggttctg caggctgagc
      601 cagatgccgt agaagaaggg atagccgacc atcgccacca ggaaggcgac cggcggcgcc
      661 accatcagcc agctgaacac actctcgcgc tccagccagc gtcccaacga gaacgcgggg
      721 cgccgacgca ccatcgtcgg cgcaagcact gccgtcatgc gctcacgcct gcttgtagat
      781 ctgcttgagc tgcccctggg cgtcggcgat cacttccttg gtcgatttgc cggcgcaggc
      841 cttggcgaac atgtcgacca cgacgaattt cgccacggtc tccgactgcg cccggctgag
      901 cggcgccggc cagcccggca gatgcgcggt cttgagcgcg tcgcggtagg gcaggttgcg
      961 cggctcgacc ttccacatcg gcgcgtcgtc gtaggcgtgc aggaacggct ggtagtaggt
     1021 gaccgctatg tcgtaccagg cgccggcctg cttgggcgcc atcagccagc gcaggaagtc
     1081 cttggccgcc tgcttgtcct gggtgtgcgc gaagatcgaa tggcagagcg gattcagcat
     1141 gtggaagcgg cccttcggac ccttcgggtt ctccgactgg tcgatcacct tggccatgtc
     1201 gggaaagtcc ttcttggccg cccacaggat cgactcggcg ttgttggtgc aggagatctg
     1261 ctccgacagg aacgccttgt tgttgttgac gtcggtccag cccagcacgt cctcgaacat
     1321 ggtctccttg aagaacttgc ggcagaagtc gatcgcccgc gcggtctcgg cggaatcgat
     1381 cacgatggtc ttgccgtcgg cctcgacctc gcggccgccg taggaccaca agagcggata
     1441 gagccagccg tgattgtcgc cgaagccgtg gccgagctcg aagccgaacg gatggccggc
     1501 tttcttgagc ttgatgccgg cttccagcag ctcgtcccag gtgtcgggga acttgtcgta
     1561 gccggcctgc ttgaaccagt cggtgcgcca gttcatcagc tggccgatgt tgccgaacgg
     1621 gatcgccttc cattttccgc cgaccaccac cgcttcctgc gccgattcgt accagccgcc
     1681 cccttccttg ccgatctcga gggcgatgtc gctcacgtcg acgaactttt cgtcgaacag
     1741 gaaggcccag ttgaagccga tcgcggtcat gtcgggcccg ctgttgttct ccgccgcggt
     1801 ggtgacacgg gtctgcaggc tgccgacgct caccacctcg tagttgatct tgatgccggt
     1861 cgccttctcg taggcggacg ccaggttgtt cttgaagtag gcgtcgtagg gcggcacgaa
     1921 cgagctctcg tgcatcatcg tgagactctt cggcgcggcc cgggcgccgg acgaaccgag
     1981 cagcgtgccc gcggcgccga gcgccgtaag cttcaggacg tctcgacgag actgacggga
     2041 acgaccgatc atacccacgc ctccctagtg cttgttgaag tgaagcatag ccgaggcaca
     2101 ggacgtccac cacctcaatg gctcgcccat ccgctggggt cggcacaacg ggcagcgcag
     2161 ccctgccggc ttgagccggc ggccgaaaag attgaaggcc ataatgcggt cgatcgacag
     2221 cgcgccgcct cacccgttgc agtccccgtc accggctgca ggcacccgcg aagtaggcct
     2281 tcgcctcgca cgccttgccg cccggcaggg cgcaggcgcc ctgctcgtcg gccgcgccgc
     2341 tgttcgcgac cacggtgtag cggccgccgg tgatggcgca gtagcgcgcc gccggggtta
     2401 tgtatcccgt cacgcgcagg ccgcccgcgg ggcattcgcc gcggaacatc gcccattcct
     2461 cgcactggta gttgtcggtg aagatgcaca caccgtattg cccaccatcg ggtcggcgct
     2521 cgatgcggag cgtgccgccc ttctcgacgc accgcaccga agcgggattg gcgagctgcg
     2581 gcgccggtgg cgtttgccct tgggcggacg ccccgaggca ggccgccgcc aggccgcagg
     2641 ctgcgatgac caaagcgatg gatgctctcg acatcagcgc gccgtctggc cgcttggcat
     2701 c
//
LOCUS       DASWGA010000268         2621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2176923, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000268 DASWGA010000000
VERSION     DASWGA010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2176923"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..373)
                     /locus_tag="VF991_06560"
     CDS             complement(<1..373)
                     /locus_tag="VF991_06560"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9556138.1"
                     /translation="MKPRRMMHLGAFVHETGQHVAAWRHPQAHAESGTSFAQAVEVAQ
                     AAERGKFDLLFLADSAAVNLSANPDARGRMGKVVKFEPMTILSALAAVTKNLGLVATS
                     TTTFNEPYTLARQFASLDQISG"
     gene            548..1132
                     /locus_tag="VF991_06565"
     CDS             548..1132
                     /locus_tag="VF991_06565"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9556139.1"
                     /translation="MLTLYFAPGASSMAAHIALQEVGAPFEGKPLSFNKKDMRQPAFL
                     AVNPEGKVPTLLIDGRRLTEVAGILFYLAKRFPAAKLLPDGDIEAEAQVVSWMSFIAS
                     TIHPARRQGLEHARSVYKLADQRLGSNEWAVGGRYSIADIHLFRLYWRFRGSLNPAPG
                     DFPNIEKHYERVMARPAVKKTIEVESKIGYELPM"
     gene            complement(1251..>2621)
                     /locus_tag="VF991_06570"
     CDS             complement(1251..>2621)
                     /locus_tag="VF991_06570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9556140.1"
                     /translation="AVRLSGTGNAGAYIYPPMPATTNAVKNVIDVYRTPAMEVNSKVV
                     FTNTTPIGAYRGAGRPEGNYYMERLIDTAAREMGIDRVELRRRNHIASGQMPYKAPSG
                     MNYDSGEFTTVLDKALLADDWQGFDKRKAESKARNKLRGRGIGSYLEVTGPPSKEYGG
                     IRFEADGTVTMLSGTLDYGQGHATPFAQVLSDKIGIPFERFRLLQGDSDQLKVGGGTG
                     GSKSALVASQAFLEAGDKLIEQGKQIAAHVLEASAVDIEFSRGRFTIAGTDRGIGLLE
                     LADKLRSGLKLPTDVPQSLDVSHISDNPPFSFPNGCHVAEVEIDRDTGQIEVVRYFMV
                     NDFGTVINPMLTAGQAHGGVVQGIGQALMERTVYDPQGQPITGSYMDYALPRASDAPD
                     FSIENHSVPCKTNLLGVKGCGEAGCAGALPSVMNAVVDALSEVGVTHIDMPVTPEKVW
                     RVLNGS"
BASE COUNT          426 a          839 c          882 g          474 t
ORIGIN      
        1 cgccgctgat ctggtcgagc gaggcgaact ggcgggcgag cgtatagggc tcgttgaagg
       61 tcgtggtcga ggtggcgacc aggccgagat ttttggtcac cgccgcgagc gccgatagga
      121 tcgtcatggg ctcgaacttc accaccttgc ccatgcggcc gcgggcgtcg ggattggccg
      181 agaggttgac ggcggcgctg tcggccagga acaaaagatc gaacttgccg cgctcggccg
      241 cctgcgcgac ttcgaccgcc tgggcgaagc tcgtgcccga ctcggcatgc gcctggggat
      301 ggcgccaggc ggcgacatgc tggccggtct cgtgcacgaa ggctccgaga tgcatcatcc
      361 gacgtggctt catggtgcct cgctgtccaa ttccggaacg cggacagtat gaaacgagac
      421 gcaagtccta tgccacgggc ttcaagacgc cggagcccgg taattcactg tcgcggatgc
      481 ctattctagc gcattcgggg gtatcttttc ggccaaatgg ttgattcgtg atcaggagga
      541 aacgcccatg ctgaccttgt atttcgcgcc cggcgccagc tcgatggccg cgcacatcgc
      601 cctgcaagag gtcggcgcgc cgttcgaggg caagcccttg tcgttcaaca agaaggacat
      661 gcgccagccg gccttcctgg ccgtcaatcc cgaaggcaag gtgccgaccc tgctgatcga
      721 cggccggcgg ctgaccgaag tggccggcat cctgttctat ctcgccaagc gctttccggc
      781 cgcgaagctc ctgcccgacg gcgacatcga ggccgaggcg caggtcgtct cctggatgtc
      841 gttcatcgcc tccaccatcc atccggcgcg acggcaaggg ctggagcacg cccgctcggt
      901 ctacaagctc gccgaccagc gcctgggcag caacgagtgg gcggtcggcg ggcgttactc
      961 gatcgccgac atccacctgt tccggctata ctggcgcttc cgcggctcgc tcaatcccgc
     1021 gcccggagac ttccccaaca tcgagaagca ctacgaacgc gtgatggcgc ggcctgcggt
     1081 gaagaagacg atcgaggtcg aatcgaagat cgggtacgag ctgccgatgt agtctcgcct
     1141 ggagctagag ctcggtgtca tcccgagcgc agcgagggac ctttaaggca acaggaaagg
     1201 tccctcgctt cgctcgggat gacagcattt tcttggcgaa gagagtccgg ctaggaaccg
     1261 ttcagcaccc gccacacctt ctccggcgtc accggcatgt cgatgtgggt gacgccgact
     1321 tcgctcaagg catcgaccac cgcgttcatc accgacggca gggcgccggc gcagcccgcc
     1381 tcgccgcagc ccttgacgcc caaaaggttg gtcttgcacg gcacggaatg gttctcgatc
     1441 gagaagtccg gcgcatcgga ggcgcgcggc aaggcgtagt ccatgtacga gccggtgatc
     1501 ggctggccct gcgggtcgta gacggtgcgc tccatcagcg cctggccgat gccctggacg
     1561 acgccgccat gcgcctggcc cgccgtcagc atcggattga tgaccgtgcc gaagtcgttg
     1621 accatgaaat agcgcaccac ctcgatctgc ccggtgtcgc ggtcgatctc gacctcggcg
     1681 acatggcagc cgttgggaaa cgaaaacggc ggattgtccg agatgtggct gacgtcgagc
     1741 gactgcggca cgtcggttgg cagttttagg cccgagcgca gcttgtcggc gagttcgagg
     1801 aggccgatgc cgcggtccgt gccggcaatc gtgaagcgcc cgcgggaaaa ttcgatgtcc
     1861 acggccgacg cctcgagcac gtgggccgcg atctgcttgc cctgctcgat cagcttgtcg
     1921 ccggcttcga ggaaggcctg gctggcgacc agcgccgact tcgagccgcc ggtgccgccg
     1981 ccgaccttga gctggtcgga gtcgccctgc agcaggcgga atcgctcgaa cgggatgccg
     2041 atcttgtcgc tcaacacctg ggcgaagggc gtggcgtggc cctggccgta gtcgagcgtg
     2101 ccgctcagca tggtgaccgt gccgtcggct tcgaagcgga tgccgccata ctctttgctg
     2161 ggcggtccgg tgacctcgag gtaggagccg atgccgcggc cgcgcagctt gttgcgggcc
     2221 ttgctctcgg ccttgcgctt gtcgaagccc tgccagtcgt cggcgagcag tgccttgtcg
     2281 agcacggtgg tgaattcacc cgaatcgtag ttcatgcccg acggcgcctt gtagggcatc
     2341 tggccggacg cgatgtggtt gcgccggcgc agctcgaccc ggtcgatgcc catctcgcgc
     2401 gccgccgtgt cgatcaggcg ctccatgtag tagttgccct cgggccgtcc ggcgccgcga
     2461 taggcgccga tcggcgtggt gttggtgaac acgaccttgg agttcacctc catcgccggc
     2521 gtcctgtaga catcgatgac gttcttcacc gcgttggtgg tcgcgggcat cggcggatag
     2581 atgtaggcgc cggcgttgcc ggtgccgctg agccgcacgg c
//
LOCUS       DASWGA010000269         1687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1040475, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000269 DASWGA010000000
VERSION     DASWGA010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040475"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1143
                     /locus_tag="VF991_06575"
     CDS             <1..1143
                     /locus_tag="VF991_06575"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9556141.1"
                     /translation="RMGKVVKFEPMTVLSALAAVTKNLGLVATSTTTFNEPYTLARQF
                     ASLDQISGGRAGWNLVTSNNEGDALNYSREAHLSHSDRYDRAIEFAEVVNGLWDSWDD
                     DAFIRDKESGVFFDPSKVHVLDHKGRHFQVRGPLNVARSPQGRPVLVQAGASGTGRDV
                     AARLAELVFTAQTTFEQAQEFYADVMTRLPKFGRTPDQVKVMPGFYPVVAPTEAEAKE
                     KFDYLQSLIQPTVGISILEHTIGVKGLDKLPLHGPVPEMADTNGPLSRQRLLLEAARR
                     DGLTLWELCLLNAGPRGHTLVIGTPQHIADVMEHWFKNGAADGFNVMPAWLPGSLTDF
                     VDMVIPELQRRGLFRTEYEAMTLRENLGLPRPVNRFHTSRSIEAAQ"
     gene            1140..>1687
                     /locus_tag="VF991_06580"
     CDS             1140..>1687
                     /locus_tag="VF991_06580"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556142.1"
                     /translation="MSRLPILSRRQVGGLAGGVLVAGLLPAQAADASTFVSGFPLPMN
                     LDPHQVYDVPMQSMMLNAYDNLYRYQGDPPKIVPWLAESHTVSEDGLAWEFKLRAGLK
                     FHDGSPLTAEDVVYSFRRVLALGLAPAGAFLKILKPDNVTAPDPLVVRFKLETSYAPF
                     FAAIPSICIVNPRLIKANEKDG"
BASE COUNT          289 a          585 c          523 g          290 t
ORIGIN      
        1 cgcatgggca aggtggtgaa gttcgagccc atgacggtcc tgtcggcgct cgcggcggtg
       61 accaagaatc tcggcctggt cgccacctcg accacgacct tcaacgagcc ctatacgctc
      121 gcccgccagt ttgcctcgct cgaccagatc agcggcgggc gggccggctg gaatctcgtc
      181 acctccaaca acgaaggcga cgcgctgaac tatagccgcg aggcgcacct gtcgcattcc
      241 gaccgttacg accgggcgat cgagttcgcc gaggtggtga atgggctgtg ggacagctgg
      301 gacgacgacg ccttcatccg tgacaaggag tcgggcgtct tcttcgatcc gtcgaaggtc
      361 catgtgctgg accacaaggg caggcacttc caggtgcgcg ggccgctcaa cgtcgcccgc
      421 tcgccacagg gacggccggt cctggtgcag gccggcgcct ccggcaccgg ccgcgacgtt
      481 gccgcgcggc tggccgagct ggtcttcaca gcgcagacca ccttcgagca ggcccaggaa
      541 ttctatgccg acgtcatgac gcgcctgccc aagttcggcc gcacgcccga ccaggtgaag
      601 gtcatgccgg gcttctatcc cgtggtcgcg ccgacggagg ctgaggccaa ggagaagttc
      661 gattacctgc agtcgctgat ccagcccact gtcggcatct ccatcctcga gcacacgatc
      721 ggcgtgaagg gcctcgacaa gctgccgttg cacgggccgg tgcccgagat ggccgacacc
      781 aacggcccgc tcagccgcca gcgactgctg ctggaagcgg cgcggcgcga cggccttacc
      841 ttgtgggaac tctgcctgct caacgccggt ccgcgcgggc atacgctggt catcggcaca
      901 ccccagcata tcgccgacgt gatggagcac tggttcaaga acggcgccgc cgatggcttc
      961 aatgtgatgc cggcctggct gccgggttcc cttaccgatt ttgtcgacat ggtgatcccg
     1021 gagctgcagc gccggggtct gttcagaacg gagtacgaag ccatgacctt gcgagagaat
     1081 ctcggcctgc cgcggccggt caaccgcttt cacacatcgc gttcgatcga ggccgcgcaa
     1141 tgagccggct tcccatcctc agccgccgcc aggtgggcgg cctggccggt ggcgtgctgg
     1201 tcgctggatt gctgccggcc caagctgccg acgcctcgac tttcgtcagc ggcttccccc
     1261 tgccgatgaa tctcgatccg catcaggtct acgacgtgcc gatgcagtcg atgatgctga
     1321 acgcctatga caatctctat cgctaccagg gcgatccgcc caagatcgtg ccctggctgg
     1381 ccgagagcca caccgtgtcc gaagacgggc tcgcctggga attcaagctg cgcgccggcc
     1441 tgaaattcca cgacggcagc ccgctcacgg ccgaagacgt ggtctacagc ttccgtcgcg
     1501 tgctcgccct ggggctggcc ccggccggcg ccttcctgaa gatcctcaag cccgacaacg
     1561 tcaccgcgcc cgatccactg gtcgttcgct tcaagctcga gacgtcctat gcaccgttct
     1621 tcgccgcgat ccccagcatc tgcatcgtca atccgcgcct catcaaggcc aacgaaaagg
     1681 acggcga
//
LOCUS       DASWGA010000270         2862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1930539, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000270 DASWGA010000000
VERSION     DASWGA010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2862
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1930539"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1197
                     /locus_tag="VF991_06585"
     CDS             <1..1197
                     /locus_tag="VF991_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015343042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PotD/PotF family extracellular solute-binding
                     protein"
                     /protein_id="HEX9556143.1"
                     /translation="TGFPTLWAQTTKNITLRQFGTGVSNINEIAEKCKADLGITLQMT
                     ALDSDAVVQRAVTQPNSYDIADIEYWMVKKVYPANVLQAMNVKKIKYFDKIVPIFTSG
                     KLKPDSVVAQGTAPNTVSFVEGAGSTKFAKGQTEWFTMIPTIYNADTLGIRPDLVGRK
                     IENWKDILDPKFKGKTAILNIPSIGIMDAAMICESAGIVKYVDKGNMTKAEIDKTIDF
                     LIKTKKDGQFRAFWKTFDESVNLMASGEVVIQSMWSPAVTAVRSKGVQCVYQPLKEGY
                     RAWGGGLGLAKHLQGPQLDAAYEYINWYLSGWVGAFLNRQGYYSAVLDTAKANMSADE
                     WGYWMEGKPAQGDIKNPQGVVMEKAGAVRDGGSFYDRMGAVSCWNAVMDEDRYMVQKW
                     NQFIAA"
     gene            1380..2234
                     /locus_tag="VF991_06590"
     CDS             1380..2234
                     /locus_tag="VF991_06590"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556144.1"
                     /translation="MKRINAWATYLQVAPLALVFLLFLVVPIATIVVVSFFDYNTTQI
                     IPDFLIQNYEELLLSPVTWRTYLQTIEFAAITWLLTLAIGFTVANFLAFHVRSATWQT
                     VLFLICTIPFWTSNVIRMISWIPFLGRNGLANTTLLQLGLIREPLEFLLFSDFAVVLA
                     YVHLYTLFMVVPIFNSMMRIDRSLLEAARDAGATGWQTLRYVIVPLCKPGIAIGSIFI
                     VTIVMGDFVTVRMMSGGQSASVSLMMMNAMSLLQYPAAAANAVVLLLLVLFTVAAMMR
                     MVDIRKEL"
     gene            2236..>2862
                     /locus_tag="VF991_06595"
     CDS             2236..>2862
                     /locus_tag="VF991_06595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006700568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9556145.1"
                     /translation="MHGRRGPAYWLLAAFFGLFVLFLYGPTLTILVLSFQGPTGGLTF
                     PMQGVSVHWFGNLFEKQMVGDFSGSFERSMALGVAAMLVTVIASFSAGLAFRTRFRGS
                     ALIFYLAIASLIVPSVLVSLGIGLLFRVLGWDPAWYSSAFGAHLTWTLPFGLLIMFAV
                     FNRFDRRYEEAARDLGATSWQTIRYIVVPILLPSLIGVGLFGFTLSYDE"
BASE COUNT          488 a          943 c          869 g          562 t
ORIGIN      
        1 accggcttcc cgacgctgtg ggcgcagacc accaagaaca tcacgttgcg ccagttcggc
       61 accggcgtgt cgaacatcaa cgagatcgcc gagaagtgca aagccgacct cggcatcacc
      121 ctgcagatga cggcgctcga ctccgatgcc gtcgtgcagc gcgcggtgac gcagcccaat
      181 tcctacgata tcgccgacat cgagtactgg atggtgaaga aggtctatcc ggccaacgtg
      241 ctgcaggcga tgaacgtcaa gaagatcaag tacttcgaca agatcgtgcc gatcttcacc
      301 tcgggcaagc tgaagcccga cagcgtcgtc gcccagggca cggcgcccaa caccgtgagc
      361 ttcgtcgaag gcgcgggttc caccaagttc gccaaggggc agaccgagtg gttcaccatg
      421 atcccgacga tctacaacgc cgacacgttg ggcatccgcc ccgacctggt cggccgcaag
      481 atcgagaact ggaaggacat tttagacccg aagttcaagg gcaagacggc gatcctcaac
      541 atcccgtcga tcggcatcat ggatgcggcg atgatctgcg aatcggccgg catcgtgaag
      601 tatgtcgaca agggcaacat gaccaaggcg gagatcgaca agaccatcga tttcctgatc
      661 aagaccaaga aggacggcca gttccgcgcc ttctggaaga ccttcgacga atcggtcaac
      721 ctgatggcct cgggcgaggt cgtgatccag tcgatgtggt cgccggcagt gaccgccgtg
      781 cgctccaagg gcgtgcaatg cgtctaccag ccgctcaagg aaggctatcg cgcctggggc
      841 ggcggtctgg gtctcgccaa gcacctgcag ggaccgcagc tcgacgcggc ttacgagtac
      901 atcaactggt acctgtcggg ctgggtcggc gccttcctca accgccaggg ctactactcg
      961 gcggtgctcg acaccgccaa ggccaacatg agcgccgacg agtggggcta ctggatggaa
     1021 ggcaagcccg cccagggcga catcaagaac ccgcagggtg tggtgatgga gaaggccggc
     1081 gccgtgcgcg acggcggctc gttctatgac cgcatgggcg cggtgtcgtg ctggaacgcg
     1141 gtgatggatg aagaccgcta catggtccag aagtggaatc agttcatcgc cgcgtaggcc
     1201 tgacgccggc ctgaatcctc gcttcgcgcc actccctcat gttcctctcc cccttggggg
     1261 agaggttagg tgagggggcg cacgacgagg ttccagaacc ccctcaccct gcctctcccc
     1321 caagggggag aggagcatga gggcgatgag gtctgaaaga atcgctgttc gctaactcaa
     1381 tgaagcgcat caacgcctgg gcgacgtatc tgcaggtggc gccgctggcg ctggtcttcc
     1441 tgctgttcct ggtcgtgccg atcgccacca tcgtggtggt gagcttcttc gactacaaca
     1501 ccacgcagat catccccgac ttcctgatcc agaattacga ggagctgctg ctttcgccgg
     1561 tcacctggcg gacctacctg cagaccatcg agttcgccgc catcacctgg ctgctgaccc
     1621 tggcgatcgg cttcaccgtc gccaatttcc tcgccttcca cgtccgctcg gcgacctggc
     1681 agacggtgct gttcctgatc tgcaccatcc cgttctggac ctccaacgtc atccgcatga
     1741 tctcgtggat cccgttcctc ggccgcaacg ggctcgccaa caccacgctg ctgcagctcg
     1801 gcctgattcg cgagccgctg gaattcctgc tgttctccga tttcgccgtg gtgctggcct
     1861 atgtccatct ctacacgctg ttcatggtgg tgccgatctt caactcgatg atgcgcatcg
     1921 accgcagcct gctcgaggcg gcgcgcgacg ccggcgccac cggctggcag acgctgcgct
     1981 acgtcatcgt gcccttgtgc aagcccggca tcgccatcgg ctcgattttc atcgtcacca
     2041 tcgtcatggg cgacttcgtg acggtgcgga tgatgagcgg cggccaaagc gcctcggtct
     2101 cgttgatgat gatgaatgcc atgtcgctgc tgcagtatcc ggcggcggcg gccaacgccg
     2161 tggtgctgct gctgctggtg ctgttcaccg tcgccgccat gatgcgcatg gtcgacatac
     2221 gcaaggagct ctgaggtgca cggacgccgc ggtcccgcct actggctgct cgccgctttc
     2281 ttcggcctgt tcgtgctgtt cctctacggg cccacgctca ccatcctcgt gctgtcgttc
     2341 cagggcccga ccggcgggct caccttcccg atgcagggcg tgtcggtgca ctggttcgga
     2401 aacctcttcg agaagcagat ggtcggcgac ttttccggct ccttcgagcg ttcgatggcc
     2461 ctgggcgtgg ccgccatgct ggtgacggtc atcgcctcgt tctcggccgg cctcgccttc
     2521 cgcacgcgct tccgcggctc ggcgctgatc ttctatctcg ccatcgccag cctgatcgtg
     2581 ccctcggttc tggtcagcct gggcatcggc ctgctgttcc gcgtgctcgg ctgggatccc
     2641 gcctggtaca gctcggcgtt cggcgcgcac ctcacctgga ccctgccgtt cgggcttttg
     2701 atcatgttcg ccgtcttcaa ccgcttcgac cggcgctatg aggaagcggc gcgcgacctc
     2761 ggcgccacct cgtggcagac catccgctac atcgtcgtgc cgatcctgct gcccagcctg
     2821 atcggcgtcg gcctgttcgg ctttacgctg agctacgacg ag
//
LOCUS       DASWGA010000271         3605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1040611, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000271 DASWGA010000000
VERSION     DASWGA010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040611"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1702
                     /locus_tag="VF991_06600"
     CDS             <1..1702
                     /locus_tag="VF991_06600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9556146.1"
                     /translation="APDRVWLAQRRGPDRDWLKLTYAEAKRQVDALTQALLDRGFGPD
                     KPVMILSSNSIEFALLSMAAMQARAPLAPVSPAYSVMSQDHAKLRYVFDLIKPGMVFV
                     QNGEIYARALAALDLEGVLLVHVDKAPPKVQSLPWSELLATGATDAVAKSIERIEPRT
                     VAKFLFTSGSTGMPKAVINTQEMMCANLAMGQMARTRRPDEPPGVMLDWLPWNHTMGG
                     NATFQGNLAEGGTTYIDDGKPLPGLFEETLRNLREISPTYFANVPAGYAMLATALEND
                     DALARRFFKNLNSLAYGGATLPSDLYQRMEALAVKHTGYRLPFITGWGATETAPTATT
                     VHWASERVGLIGLPFPGVQLKLVPTAEAGRYELRLKSVIVTPGYYRQPDLTAEMFDEE
                     GFYKIGDAGRFVDPEDPSWGLIFDGRVVEDFKLMSGTFVLVGTLRTTAIAAATPVLQD
                     AVICGQDRDHVGLLGFPNIAACRRLANDEGARLTVAELLAHPAVVGTLRDGLARMNAE
                     GKGSSLQIKRALLMAEPPSVDAHEITDKGYINQRATLERRKALVDKLYAGGEDVIEIV
                     "
     gene            1799..3493
                     /locus_tag="VF991_06605"
     CDS             1799..3493
                     /locus_tag="VF991_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9556147.1"
                     /translation="MVELVSSSVAETRRPQMFPVLTPAELRRIERFGQRRRYRDGEFL
                     AKTGAPSPGMCIVLSGKIVVLRHDGLGHVAPIVEMKQGEFAAELAELSGHPALVDVRA
                     EGDVEALTVPPEGLRALMVAEAELGERIMRALILRRVYLIESQSAGPVLVGEPTLPDM
                     IRLQGFLTRNGHPYSVIDPKSDPQSMQMIARLSPADAVYPLVVCPDGTVLRNPSEQEL
                     ALYIGLLDETTARRVYDVVVVGAGPAGLSTAVYAASEGLSVLVVDTRAFGGQAGASAR
                     IENYLGFPTGISGQALTARAFVQAQKFGADFIIPLTVSRLDCQPGAERPMTLEMSDGW
                     RVQARAVVVASGARYRKLALPNLEQFENRGVWYWASPIEAKLCSNAEVIIVGGGNSAG
                     QAAVFLSAHAAKVWIVVRGRGLAETMSRYLVNRIEATANIEVVSETEIVELSGSPRDG
                     LQGVRWRHRSSGAETVRPIRHIFLFLGAEPATDWLRDCGIEVCRSGFVHTGADVGSPV
                     GGHRPSAHETSVRGVFAVGDVRHGSVKRVGGAIGEGANVVAQLHDVLEETRVRSGN"
BASE COUNT          584 a         1187 c         1245 g          589 t
ORIGIN      
        1 ggcgcccgac cgggtatggc tggcgcagcg ccgcggaccg gaccgcgact ggctgaagct
       61 cacttacgcc gaggccaaga ggcaggtcga tgcgctcacg caagcgctgc tcgaccgcgg
      121 cttcggcccc gacaagccgg tcatgatcct gtcgtcgaac tcgatcgaat tcgcgctgct
      181 cagcatggcg gcgatgcagg cgcgcgcgcc gctggcgccg gtgtcgccgg cctactcggt
      241 gatgagccag gatcacgcca agctccgcta cgtcttcgac ctgatcaagc ccggcatggt
      301 gttcgtgcag aatggcgaga tctatgcccg tgcactggcc gcgctggacc ttgagggcgt
      361 ccttttagtg catgtcgaca aggcgccgcc caaggtgcag tcgctgccgt ggagcgagct
      421 tctggcgacc ggggcgacgg acgcggtggc gaagtcgatc gagcggatcg agccccggac
      481 cgttgctaag ttcctgttca cctcgggcag caccggcatg cccaaggccg tcatcaacac
      541 ccaggagatg atgtgcgcca acctggcgat gggccagatg gcgcgcacgc gccggcccga
      601 cgaaccgccg ggagtgatgc tcgactggct gccgtggaac cacacgatgg gcggcaacgc
      661 caccttccag ggcaacctcg ccgagggcgg cacgacctat atcgacgacg gcaagccgct
      721 gcccggcctg ttcgaagaga ccttgcgtaa tcttcgcgag atctcgccca cctattttgc
      781 caacgtgccg gccggttacg ccatgctggc gacggcgctg gagaacgacg atgcgctcgc
      841 ccggcgcttc ttcaagaacc tgaactcgct cgcctatggc ggcgccaccc tgccgtccga
      901 cctctaccag cgcatggaag cgctggcggt gaagcacacc ggctatcggc tgcccttcat
      961 caccggctgg ggcgcgaccg agacggcgcc gacggcgacg acggtgcatt gggcctccga
     1021 gcgggtcggc ctgatcggcc tgccgtttcc cggcgtccag ctcaagctcg tgccgacggc
     1081 cgaggcagga cgctacgaac tgcgcctgaa aagcgtgatc gtcacgcccg gctactatcg
     1141 ccagcccgac ctcacggccg agatgttcga cgaggaggga ttttacaaga tcggcgatgc
     1201 cggccgcttc gtcgatcccg aggatccgag ctggggcctg atcttcgacg gccgggtggt
     1261 cgaggatttc aagctgatga gcggcacctt cgtgctggtc ggcaccctgc gcacgaccgc
     1321 gatcgctgcg gcgacgccgg tcctgcagga cgccgtgatc tgcggccagg accgcgacca
     1381 tgtaggcctg ctggggttcc ccaacatcgc cgcctgccgc cggctcgcca acgatgaagg
     1441 cgccaggctc acggtcgcgg aactcctggc gcatcccgcc gtggtcggca ccttgcgcga
     1501 cgggctggcc aggatgaacg ccgagggcaa aggctcgtcc ctgcagatca agcgcgcgct
     1561 gctgatggcc gagccgccgt cggtcgacgc ccacgagatc accgacaagg gctacatcaa
     1621 ccagcgcgcc acgctcgagc ggcgcaaggc gctggtcgac aagctctatg ccggcggcga
     1681 ggatgtgatc gagatcgtct gatctggagc gtttgccgca tgacgggggc cttgcggacc
     1741 gagcgcttgt ggcattgggt ccgggcgaca gcaagcacgg ctgaagaggc aggcctcgat
     1801 ggtcgaactg gtttcctcgt cggtggcgga gacgcgccgc ccgcagatgt ttcccgtgct
     1861 cacgccagcc gaactgcggc gcatcgagcg cttcggccag cggcggcgat accgcgacgg
     1921 cgaattcctg gcgaagacgg gcgcgcccag ccccggcatg tgcatcgtgc tatccggcaa
     1981 gatcgtggtg ttgcgtcacg acgggctcgg ccacgtagcg cccattgtcg aaatgaagca
     2041 gggcgaattc gcagccgagc tcgcggagct ctcgggtcat ccggcgctgg tcgatgtccg
     2101 ggccgagggc gatgtcgagg cgttgaccgt gccgcccgaa ggtctgcgcg cgttgatggt
     2161 cgccgaggcg gagctcggtg aacgcatcat gcgcgcgctg atcctgcgtc gcgtctatct
     2221 gatcgaatcc caatccgccg ggccggtcct ggtcggtgag ccgaccttgc cggacatgat
     2281 ccgcctgcaa ggtttcctga cgcgcaacgg ccatccctac agcgtcatcg accccaagag
     2341 cgatccgcag agcatgcaga tgatcgcgcg cctgtcgccc gccgacgcgg tctatccgct
     2401 ggtcgtctgc cccgacggga ccgtgctgcg caatccttcc gagcaggaac tcgctctcta
     2461 catcggcctg ctcgacgaga ccacggcgcg gcgggtctac gacgtcgttg tcgtgggcgc
     2521 gggtccggcc ggtctgtcga ccgcggtgta cgcggcctcg gaggggctgt cggtgctggt
     2581 cgtcgatacc cgcgcgttcg gcggccaggc cggcgccagc gcacgcatcg agaattacct
     2641 cggcttcccg acgggcattt cgggccaggc attgaccgcc cgcgcctttg tccaggcgca
     2701 gaaattcggc gccgacttca ttattccgct caccgtatcg cggctcgact gccagcccgg
     2761 cgcagagcgg ccgatgacgc tggagatgtc ggacggctgg cgggtgcagg caagagccgt
     2821 cgtcgtcgcc tcgggggcgc gctatcgcaa gcttgcgctg cccaacctcg agcagttcga
     2881 gaatcgcggc gtctggtatt gggcctcgcc gatcgaggcc aagctttgca gcaatgccga
     2941 agtgatcatc gtgggcggcg gcaactcggc gggccaggcg gcggtgtttc tgtcggcaca
     3001 cgccgccaag gtgtggatcg tggtgcgcgg ccgcggtctc gccgaaacca tgtcgcgcta
     3061 cctggtcaac cgtatcgagg cgacagccaa catcgaggtc gtgagcgaga ccgagatcgt
     3121 cgagctcagc ggctcgccgc gcgacggcct tcaaggggtg cgctggcggc atcgctcgag
     3181 cggcgccgaa acggtgcggc cgatccgcca cattttcctg ttcctcggcg cggagccggc
     3241 gacggattgg ctgagggatt gcggcatcga ggtgtgcagg agcggcttcg ttcataccgg
     3301 cgccgatgtc ggttcgccgg tcggcggaca ccggccgtcg gcgcacgaga ccagcgtgcg
     3361 cggcgtgttc gcggtcggcg acgtgcgcca cggttcggtc aagcgggtcg gcggcgcgat
     3421 cggcgagggc gcgaacgtgg tggctcagtt gcacgatgtg ctcgaagaga ccagggttcg
     3481 atccggtaac tgatcgcggc cggacgtcta tagatgctaa cctggcggtc gacgcaccag
     3541 catgacgaag gagacagcga tgaccgaagc caagctcgcc cccaatcttc cgcagtggat
     3601 gaagg
//
LOCUS       DASWGA010000272         3981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1803617, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000272 DASWGA010000000
VERSION     DASWGA010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3981
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1803617"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..788)
                     /locus_tag="VF991_06610"
     CDS             complement(<1..788)
                     /locus_tag="VF991_06610"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9556148.1"
                     /translation="MSEALPLAGLPLSGLVVLDISSFIAAPAAAVALADFGADVIKIE
                     PPGDGDPHRNSYRNASYPQSDTNFPWQLDGRLKRSIALDLKNADARVVLERLIGRADV
                     MIVNFPPPARERLRLCWEDIEPINPRLVYCSLTGYGETGPDRDRPGFDVTAYFGRSGI
                     LDAARYEGGPPGLSLPAQGDRATAMTLVAAILLGLRQRDRTGKGCWVGTSLYANGVWA
                     NGTSAAGALIGAKLPPRQAPDRPRNALTNLYRTRDDRWLQLLMVR"
     gene            complement(785..1996)
                     /locus_tag="VF991_06615"
     CDS             complement(785..1996)
                     /locus_tag="VF991_06615"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9556149.1"
                     /translation="MTEPGLPLAGLRVLDISSFIAAPAAAVVLGDWGADVIKVEGPDG
                     DPNRRIMHDSSNYPKGEVNYPWHMDSRNKRSLVLDLKMPEARATLDRLIAVSDVLICN
                     FPPPVRDKLGLGYDEVKRVNPRLIYASLTGYGETGPDRDRPGFDVTAYFARSGLLDAQ
                     RYEGGPPGVPVPAQGDRATAMTLVSAILMALIHRTKTGEGSWVGTSLLGNGLWSCGVI
                     AQAALVGAYLPHRPPPDRPRSALGNIYRTSDDRWLQLTIVREDKMWPSVCETIGRPEL
                     LDDPRFATVGERRKRSGELAAILSEAFAGRDYEHWRQAMAAHGITFGVISRPQDIPVD
                     EQAVACGAIVGTAIAELPRTLANPIKLGFAEQRIAKSAPALGQHSDEVLAEAGLSGEE
                     IARLRTSGAIR"
     gene            2119..3519
                     /locus_tag="VF991_06620"
     CDS             2119..3519
                     /locus_tag="VF991_06620"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEX9556150.1"
                     /translation="MARKRKPNFLVVLIDDLRFDELGICGHPYMKTPHIDRIGHEGAM
                     FTAAFHPTPLCSPNRASIVTGQYASRHGIIDNVARDAHSHRLPNYHAILQRLGYETAH
                     VGKWHMGNSGMPRPGYDRWVSFPGHGSIVDPVLNIDGDERQHRGYITDLLNAHAVEFL
                     RQQRSKPFALFFAHKAVHPDAFQAADGTIDLSRGGYRPAPRHADLYRGAHFPRRPNAL
                     PSAEVVKDKPAWKEAFQLRVNEASRKVLDGIQAGTDEEIRLRAAMMASVDEGMGDVFK
                     ALEETGQLDDTFILFLGDNGYFFGEHGLGPERRFAYEEGIKSPFLIRYPAWFKPGTVA
                     DDLVLTLDIAPTIVDLAGGKTADREHMQGLSLRPLAKSGKRGGWRSSFLCEYFSENAM
                     PWLIGMSYKAIRTRRHKYIHWTQKSLDGVECDELYDLKSDPYEMHNLIGKRSERATVA
                     RLRRQLATLVAQSVGL"
     gene            3524..>3981
                     /locus_tag="VF991_06625"
     CDS             3524..>3981
                     /locus_tag="VF991_06625"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9556151.1"
                     /translation="MTRALTKRALLAATLIAVSGAARPQTWPAKPIRLIVPFAPGATA
                     DIVARIFAEELGKSLGQTIVVDNKTGAGGTIATAEAARAPADGYTLVLVSQGTMVFNI
                     GLYKTPGYDPLKDLTAVAVSGGVSNVLIVHPDNPAKTVADVLAQARAKPG"
BASE COUNT          657 a         1353 c         1354 g          617 t
ORIGIN      
        1 cgcaccatca ggagctgcag ccagcggtcg tcccgggtcc ggtagaggtt ggtcagcgca
       61 ttgcgcggcc ggtcgggtgc ctggcgcggc ggcagcttgg cgccgatcag cgcgcccgcc
      121 gccgaggtgc cgttggccca cacgccgttg gcgtagagcg acgtgccgac ccagcagccc
      181 ttgccggtgc ggtcgcgctg gcgcaggccg agcaggatgg cggcgaccag ggtcatcgcc
      241 gtggcgcgat cgccctgggc gggcagcgac aggccgggcg gaccgccctc gtagcgtgcc
      301 gcgtccaaaa tgccggagcg gccgaaatag gccgtgacgt cgaagcccgg ccggtcgcgg
      361 tcggggccgg tctcgccgta gccggtgagc gagcaataga ccaggcgcgg gttgatcggc
      421 tcgatgtctt cccagcacag cctgagccgt tcgcgcgccg gcggcgggaa gttcacgatc
      481 atgacatcgg cgcgcccgat caaccgctcg agcacgacgc gggcgtcggc attcttgagg
      541 tcgagcgcga tcgagcgttt cagccggccg tcgagctgcc agggaaagtt ggtgtcgctc
      601 tgagggtagc tcgcgttcct ataactgttg cggtgcggat cgccatcgcc aggcggctcg
      661 atcttgatca cgtcggcgcc gaaatcggcc agagccacgg ccgccgcagg ggcggcgatg
      721 aacgaactga tgtccaacac gacgagcccg ctgaggggca gcccggcaag cggcagtgcc
      781 tcgctcatcg aatggcgccg ctcgtgcgca ggcgcgcgat ctcctcgccc gacaggccgg
      841 cttcggcgag gacctcgtcg ctgtgctggc cgagcgccgg cgcggatttg gcgatgcgct
      901 gctcggcgaa gccgagcttg atcggattgg cgagcgtgcg cggcaactcg gcaatcgcgg
      961 tgccgacgat cgcgccgcag gccacggcct gctcgtcgac ggggatgtcc tgcggccggc
     1021 tgatgacgcc gaaggtgatg ccgtgcgcgg ccatcgcctg gcgccaatgc tcgtagtcgc
     1081 ggccggcaaa ggcttcgctc aaaatggcgg caagttcgcc cgagcgtttg cgccgctccc
     1141 cgaccgtagc gaagcgcgga tcgtccaaaa gctcgggccg tccgatggtc tcgcagaccg
     1201 acggccacat cttgtcctcg cgcacgatgg tgagctgcag ccagcgatcg tccgaggtgc
     1261 gatagatgtt gcccagcgcc gagcgcggcc ggtcgggcgg cgggcggtgc ggcaggtagg
     1321 cgccgaccag ggcggcctgg gcgatgacgc cgcacgacca caggccgttg cccaggagcg
     1381 acgtgccgac ccacgagccc tcgccggtct tggtgcgatg gatgagggcc atcaggatgg
     1441 ccgagaccaa cgtcatcgcc gtcgcccggt cgccttgcgc gggcaccggc acgccgggcg
     1501 gaccgccttc gtagcgctgg gcgtccaaaa ggccggagcg cgcgaagtag gcggtgacgt
     1561 cgaagcccgg ccggtcgcgg tcggggccgg tctcgccata gccggtcagc gaggcgtaga
     1621 tcagccgggg attgacccgc ttcacctcgt catagccaag gccgagcttg tcgcgcaccg
     1681 gcggcgggaa gttgcagatc agcacgtccg acaccgcgat caggcggtcg agcgtggcgc
     1741 gcgcctcggg catttttagg tcgagcacca gcgagcgctt gttgcgcgag tccatgtgcc
     1801 agggatagtt gacctcgccc ttcggatagt tcgacgaatc gtgcatgatc cggcggttgg
     1861 gatcgccgtc gggcccctcg accttgatca cgtcggcgcc ccagtcgccg agcacgacgg
     1921 cggcggccgg tgcggcgatg aacgaactga tatccagtac gcgcaatccc gccagcggca
     1981 ggccaggctc ggtcattgtc gttccctgca aagtctttcg agcgatatgg gcgcgggcct
     2041 ctggcgtccg tcaaggccgg ccgttagcgt ggtttcggca cgcggcgtgc ttcacgcggc
     2101 gtagtggggg gagttatcgt ggccaggaag cgcaagccca attttctcgt cgtcctgatc
     2161 gacgacctgc ggttcgacga actcgggatc tgcggccatc cctacatgaa gacgccgcat
     2221 atcgaccgca tcggccatga gggcgcgatg ttcaccgcgg cgttccatcc cacgccgctc
     2281 tgctcgccca accgcgcctc gatcgtcacc ggccagtatg ccagccggca cggcatcatc
     2341 gacaacgtgg cgcgcgacgc ccacagccac cgcctgccca actatcacgc gatcctgcag
     2401 cgcctgggct acgagaccgc ccatgtcggc aaatggcaca tgggcaactc cggcatgccg
     2461 cggccgggct acgaccgctg ggtgagcttc cccggccacg gctcgatcgt cgatccggtg
     2521 ctgaacatcg acggcgacga acgccagcac cggggctaca tcaccgatct tttgaacgcg
     2581 catgccgtcg agttcctgcg ccagcaacgc agcaagccct tcgccctgtt cttcgcccac
     2641 aaagcggtgc atcccgacgc cttccaggcg gccgacggca cgatcgatct cagcaggggc
     2701 ggctatcgcc ccgcgccgcg ccatgccgat ctctacaggg gcgcgcactt tccgcgccgg
     2761 cccaacgcct tgccgtcggc cgaggtggtg aaggacaagc ccgcctggaa ggaggcgttc
     2821 cagcttcgcg tcaacgaagc ctcgcgcaag gtgctcgacg gcatccaggc cggcaccgac
     2881 gaggagatcc gcctgcgcgc cgccatgatg gcctcggtcg acgagggcat gggcgatgtg
     2941 ttcaaggcgc tggaggaaac cggccagctc gacgacacct tcatcctgtt cctgggcgat
     3001 aacggctatt tcttcggcga gcacgggctg gggccggaac ggcgcttcgc ttatgaagaa
     3061 ggcatcaagt cgccgttcct catccgctac ccggcctggt tcaagccggg cacggtggct
     3121 gacgatctcg tgctgacgct cgacatcgcg cccacgatcg tcgacctcgc cggcggcaag
     3181 acggccgatc gcgagcacat gcagggtctg tcgctgcggc ccttggcgaa aagcggcaag
     3241 cgcggcggtt ggcgatcgtc cttcctgtgc gagtatttca gcgagaacgc catgccgtgg
     3301 ctcatcggca tgagctacaa ggcgatccgc acccggcgtc acaagtacat ccactggacg
     3361 cagaagtcgc tcgacggcgt cgaatgcgac gagctctacg acctcaagag cgatccctac
     3421 gaaatgcaca atctgatcgg caagcgcagc gaacgcgcca cggtcgcgcg actgcgccgc
     3481 cagctcgcta cgctggtcgc gcaatcggtc gggctttaag gcgatgacga gagccctgac
     3541 caagagagct ttgcttgccg cgacgctcat cgccgtgtcg ggagcagctc ggccacagac
     3601 ctggcccgcc aagccgatcc gcctaatcgt tcctttcgcg cccggcgcca ccgccgacat
     3661 cgtcgcccgc atctttgccg aggaactcgg caagtcgctc ggccagacca tcgtggtcga
     3721 caacaagacc ggtgccggcg gcacgatcgc caccgccgag gcggcgcgcg cgccggccga
     3781 cggctacact ctggtgctcg tctcgcaagg cacgatggta ttcaacatcg ggctctacaa
     3841 gacgccgggc tacgatccgc tgaaagactt gacggccgtg gcggtgagcg gcggcgtctc
     3901 caacgtcttg atcgtacatc ccgacaatcc ggccaagacc gtggccgacg tgctggccca
     3961 ggcgcgcgcc aagccgggcg a
//
LOCUS       DASWGA010000273         5185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1040934, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000273 DASWGA010000000
VERSION     DASWGA010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5185
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040934"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VF991_06630"
     CDS             <1..312
                     /locus_tag="VF991_06630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX9556152.1"
                     /translation="YVKFAKKYMPNLNIEDNTAVPGYINSFMITRVLKACGDNLTREN
                     VLKQATSLKDVTAPMLLPGITLSNSPDDYLAFHAMQLCQFDGEKFVSLGDVIRLDVAK
                     K"
     gene            339..1961
                     /locus_tag="VF991_06635"
     CDS             339..1961
                     /locus_tag="VF991_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX9556153.1"
                     /translation="MRGLIMETPLLISGIIEHAAATHGATEIVSRTVEGGLHRYTYAD
                     ARARAKRLAKALLALGVRSGDRVGSLAWNTHHHFELFYGVSGTGAVLHTINPRLFEEQ
                     IAFIVNHAEDKWICFDEATRPVAQRIAPRLRTVEGWIYLGNGGKIPAASPAPVLDYES
                     LLANQDAAYDWPQFDEFQASTICYTSGTTGVPKGVVNSHRSTLLSALIMSTADMIGGY
                     RSGTREVVMPIAPLFHGNGWQMVYTAPMNGHKLVLPGRNFEPDKLYELMASEQVTLAA
                     AVPTVWLTLLDYMDGKGLRFGSLRAALVAGSKPPRALLEALEGRHGVEVAQCWGMTEA
                     LGATKATLLPGLADAPAAERIEHKLRSGRIAFGTELRIVDDDGTLLPRDGQAFGHLQA
                     RGCIIAAAYLKQEPASDGWLSTGDMARIHADGSLDIVDRSKDVIKSGGEWISSVAVES
                     AALDHAGIVQAAVIAIPHPRWQERPLLIAVRRPGSDVTREAMLKHLGERMASWWLPDD
                     VVFVDALPMTATGKINKVTLRQQFAEERRKAS"
     gene            complement(2049..2870)
                     /locus_tag="VF991_06640"
     CDS             complement(2049..2870)
                     /locus_tag="VF991_06640"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9556154.1"
                     /translation="MKLKDKVAIVTGTSPNIGGGIAEELAAEGAAIVAVDANAANAKD
                     CAGYINGTQGRAIAVTCDVTDEAEVKAAVDAAVAAFGKVDVLVNNAAFFNKKGVLDMP
                     FEEWNRQTGVILGGAFLFTKHACKAMIARGAGGSVINIISTAGHQGEPGNIAYSTSKC
                     GLLNFTRSAAMELVGHGIRVNSLTPTATDPAESFERAARWGRTVKKPESLDRVMKPFR
                     TRIPMQKLPVPSDYGHAAVFLASDDARMITGTDLRVDAGAVARYWAWDPTAGATL"
     gene            complement(2894..3931)
                     /locus_tag="VF991_06645"
     CDS             complement(2894..3931)
                     /locus_tag="VF991_06645"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556155.1"
                     /translation="MAEILALGISHYPPLHGPDERMAWILKRMLQNPALPEALKSPAG
                     WPAAMRAEWGNDEGASSATRHRADLVGWLEKTRAALDAFDPDFILMWGDDQYENFKED
                     IVPPYCISAYDRFRFTAPPGNVWGETDKTFDLPGHRAAAKLLATRLIEEGFDTAYAYK
                     PLHHPLGHAFTNAVMYLDYARKGFDYPIVPFAINCYGRRVIAQRGGLPVFDRVIAEAD
                     LDPPAPTPKRLFDLGAATARILAASPYRVALLASSGWSHAFLTAKNHFLYPDTPADRR
                     MYDALRTCDWPTWRNCSGAAVEDSGQQEILNWMCLAGALSELKRKPQETGFVDTWIFN
                     SSKAFLIAPPN"
     gene            complement(4071..>5185)
                     /locus_tag="VF991_06650"
     CDS             complement(4071..>5185)
                     /locus_tag="VF991_06650"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556156.1"
                     /translation="FIMGAIASGWNGIVRKKTLEDNQYNLRRVVDIPGTGPFKSKRRV
                     ENEVWVMEKNPTYWNKGLPYLDGIEFYHALPFSPELGSSLLSGRVDYARLLDPGSLRK
                     VKATQGMSGTDFYQSVIQATWMNNKKKPFDDPRVRRAFHLVLDKPVLVDVVKDIAPMM
                     VGGFIYPFSDFATPLPELSKRLGYQPDPTASVKEARALMAAAGHAKGITGLDYLVREV
                     ASFKLWSQAIQAMLQQTLNVQSNIRTAVESVWFDDVKTGKFDLAIGAIVSTLLDPSDY
                     FNAWYSKNGPQNYSMWENAKFNELLPLIDSEVDPKKRLALIRQAEAIMEDDPPLLPMS
                     WEKINDGWYNYVKGHNPKEYFGIYDVVRFDTFWLDK"
BASE COUNT          863 a         1690 c         1744 g          888 t
ORIGIN      
        1 tacgtgaagt tcgcgaagaa atacatgccg aacctcaaca tcgaggacaa cacggcggtg
       61 ccgggctaca tcaattcgtt catgatcacc cgggtcctga aagcctgtgg cgacaacctg
      121 acgcgcgaga acgtgctgaa gcaggcgacc agcctgaaag acgtcaccgc gccgatgctg
      181 ctgcccggca tcacgctcag caactcgccc gacgactacc tggcgttcca cgccatgcag
      241 ctctgccagt tcgacggcga gaagttcgtc tccctgggcg atgtgatccg cctcgacgtc
      301 gcgaagaaat gagcggcgac gagacaaggg agggcggcat gcgcggcctg atcatggaaa
      361 ccccgttgct gatctcgggc atcatcgagc atgccgcggc cacccacggc gcgaccgaga
      421 tcgtgtcgcg caccgtcgag ggcggcctgc accggtacac ctacgccgat gcccgggcgc
      481 gggccaagcg gctggccaag gcgctgttgg cgctcggcgt gcgcagcggc gatcgcgtgg
      541 gctcgctggc ctggaacacg catcaccatt tcgagctgtt ctacggcgta tcgggcaccg
      601 gtgcggtgct gcacacgatc aacccgcgcc tgttcgagga gcagatcgcc ttcatcgtca
      661 atcatgccga ggacaaatgg atctgcttcg acgaggcgac ccggccggtc gcccagcgca
      721 tcgccccgcg cctcaggacg gtcgaaggct ggatctatct cggcaacggc ggcaagatcc
      781 ccgccgcgtc acccgcgccg gtactcgact atgagagcct gctggccaac caggatgcgg
      841 cctacgactg gccacagttc gacgaattcc aggcctcgac catctgctac acctcgggca
      901 cgacgggggt gcccaagggc gtggtcaact cgcatcgctc gaccctgctc agcgccctga
      961 tcatgagcac cgccgacatg atcggcggct atcgctcggg cacgcgcgag gtggtgatgc
     1021 cgatcgcccc gctgttccac ggcaacggct ggcagatggt ctacaccgcg ccgatgaacg
     1081 gccacaagct ggtgctgccg ggccgcaact tcgagcccga caagctctac gagctgatgg
     1141 cgtccgagca ggtgacactg gccgccgcgg tgccgacggt ctggctgacc ttgctcgact
     1201 acatggacgg caagggcctg cgcttcggct ccctgcgcgc cgccctggtg gccggctcca
     1261 agccgccgcg tgccctgctc gaggcgctcg agggccgcca cggcgtcgag gtcgcgcaat
     1321 gctggggcat gaccgaggcg ctgggcgcca ccaaggcgac gctgctgccc ggccttgccg
     1381 acgcccccgc cgcggaaagg atcgagcaca agctcaggtc gggccgcatc gccttcggca
     1441 cggagctgcg cattgtcgac gacgacggca cgctcctgcc gcgcgacggc caggcgttcg
     1501 gccacctgca ggcccgcggc tgcatcatcg ccgcggccta cctgaagcag gaaccggcat
     1561 cggacggctg gctgtcgacc ggcgacatgg cgcgcatcca tgccgacggc agcctcgaca
     1621 tcgtcgatcg ctccaaggac gtcatcaagt cgggcggcga atggatttcg agcgtcgccg
     1681 tcgaaagcgc ggcgctcgac catgccggca tcgtccaggc cgccgtgatc gccattcccc
     1741 atccgcgctg gcaggagcgg cccttgctga tcgccgtgcg ccggccgggc agcgacgtca
     1801 cgcgcgaggc gatgctaaaa catctcggcg agcgaatggc gtcgtggtgg ctgcccgacg
     1861 acgtggtgtt cgtcgatgcc ctgccgatga ccgccaccgg caagatcaac aaggtgaccc
     1921 tgcgccagca gttcgccgaa gaacgccgca aggcgtcttg attcttccgg accgcgcgca
     1981 tcctgcgcgc tcatgaccat gagcgcgcag gatgcgcgcg gtccggaaaa ctatgagcgc
     2041 ccccagcgtt acagcgtggc gcccgccgtg ggatcccacg cccagtagcg cgccacggcg
     2101 ccggcatcga cccggaggtc ggttccggtg atcatccggg catcgtccga ggcgaggaac
     2161 accgcggcgt ggccgtaatc gctgggcacc ggcagcttct gcatcggaat gcgcgtgcgg
     2221 aacggcttca tcacgcggtc gaggctctcg ggcttcttta ccgtgcggcc ccagcgcgcc
     2281 gcccgctcga acgattcggc ggggtcggtc gcggtgggcg tgaggctgtt gacccggatg
     2341 ccgtggccga ccagttccat cgccgccgag cgggtgaagt tcagcaggcc gcacttcgac
     2401 gtgctgtagg cgatgttgcc gggctcgccc tgatggcccg ccgtcgagat gatgttgatg
     2461 actgagccgc cggcgccgcg cgcgatcatc gccttgcagg cgtgcttggt gaacaggaag
     2521 gcgccgccca ggatcacccc ggtctggcgg ttccattcct cgaagggcat gtccaaaacg
     2581 cccttcttgt tgaagaacgc ggcattgttg accagcacgt cgaccttgcc gaaggcggcg
     2641 acggcggcgt cgaccgccgc cttgacctca gcctcgtcgg tgacgtcgca ggtgacggcg
     2701 atggcgcgcc cctgggtgcc gtttatataa ccggcgcagt ccttggcatt ggccgcattg
     2761 gcgtcgacgg cgacgatggc cgcgccctcg gccgccagct cctcggcgat gccgccgccg
     2821 atattggggc tggtgccggt gacgatggcg accttgtctt tcagcttcat gtgtcagccc
     2881 caatcggcgt tgatcagttc ggcggtgcga tcaggaacgc cttggacgaa ttgaagatcc
     2941 aggtgtcgac gaagccggtc tcctggggct tgcgcttgag ctcgctcagc gcgccggcga
     3001 ggcacatcca gtttaaaatc tcctgctggc cgctgtcctc gacggcggcg cccgagcagt
     3061 tgcgccaggt cggccagtcg caggtccgta gagcgtcgta catccgccga tcggccggcg
     3121 tgtcgggata gaggaaatgg ttcttggccg tcaggaaggc atgcgaccag ccggacgagg
     3181 cgagcagggc cacccggtaa ggcgaggcgg ccaggatgcg cgccgtcgcg gcgccgaggt
     3241 cgaacagccg cttgggcgtc ggcgccggcg gatcgagatc ggcctcggcg atcacccggt
     3301 cgaacaccgg caggccgccg cgctgggcga tcacccgccg gccgtagcag ttgatggcga
     3361 acggaacgat cggatagtcg aagcccttgc gggcatagtc gagatacatc accgcgttgg
     3421 tgaaggcatg gcccagcggg tgatgcagcg gcttgtaggc ataggcggtg tcgaagcctt
     3481 cctcgatcag gcgagtggcc aaaagcttgg cggccgcccg gtggcccggc aggtcgaagg
     3541 tcttgtcggt ctcgccccac acgttgccgg gcggcgcggt gaagcggaag cggtcgtagg
     3601 cgctgatgca gtagggcggg acgatgtcct ccttgaagtt ctcgtactga tcgtcgcccc
     3661 acatcaggat gaaatcgggg tcgaacgcat cgagcgcggc gcgggttttc tccagccagc
     3721 cgaccaggtc ggcgcgatgg cgcgtcgccg acgaagcacc ctcgtcgttg ccccattcgg
     3781 cgcgcatcgc cgcgggccag cccgccgggc ttttaagcgc ctccggcagg gccggattct
     3841 gcagcatgcg ctttaggatc cacgccatgc gctcgtcggg gccatgcagc ggcggatagt
     3901 gcgatattcc gagggcgagg atttcggcca tggcgtttcc taacacttgg tagaattcat
     3961 gccgccagct tcggttggcc ggccgctgcc gtcaactgtc aagcagcgcc tgccgaaacg
     4021 aaaacgggcc ggcggttggc gccggcccgt ttgtttggcg cgatcgcggg ttacttgtcg
     4081 agccagaacg tgtcgaagcg cacgacgtcg tagatgccga aatattcttt cggattgtgg
     4141 cccttcacgt agttgtacca gccgtcgttg atcttctccc acgacatcgg cagcagggga
     4201 ggatcgtcct ccatgatggc ttcggcctgg cggatcaacg ccagacgctt cttcggatcg
     4261 acctcgctgt cgatcagcgg cagcagctcg ttgaacttgg cgttttccca catcgagtag
     4321 ttctgcgggc cgttcttgct gtaccaggcg ttgaaatagt cggacgggtc gagcagcgtc
     4381 gacacgatgg cgccgatggc gagatcgaac ttgccggtct tgacgtcgtc gaaccacacc
     4441 gattcgacgg cggtgcggat gttggactgc acgttgagcg tctgctgcag catcgcctgg
     4501 atggcctgcg accacagctt gaagctcgcc acctcgcgca ccaggtagtc gagcccggtg
     4561 atgcccttgg cgtggccggc cgccgccatc agcgcgcgcg cctccttgac cgaggcggtc
     4621 gggtcgggct ggtagccgag ccgcttgctg agctcgggca acggcgtggc gaagtcggag
     4681 aacggataga tgaagccgcc gaccatcatc ggcgcgatgt ccttgacgac atcgaccagc
     4741 accggcttgt cgagcaccag gtggaaggcg cggcgcaccc gcggatcgtc gaacggcttc
     4801 ttcttgttgt tcatccaggt cgcctggatg acgctctggt agaaatcggt gcccgacatg
     4861 ccctgggtcg ccttgacctt gcgcagcgaa cccggatcga gcaggcgggc atagtcgacg
     4921 cggcccgaca gcaggctgga gccgagctcg ggcgagaacg gcagggcgtg atagaactcg
     4981 atgccgtcga gatagggcag gcccttgttc caataggtcg ggttcttctc catcacccag
     5041 acttcgttct cgacacggcg cttgctcttg aacgggccgg tgccggggat atcgacgacg
     5101 cggcgcaggt tgtactggtt gtcctcgagc gtcttcttgc gcacgatgcc gttccagccg
     5161 ctggcgatcg cgcccatgat gaagt
//
LOCUS       DASWGA010000274         2094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1041065, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000274 DASWGA010000000
VERSION     DASWGA010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1041065"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..842
                     /locus_tag="VF991_06655"
     CDS             174..842
                     /locus_tag="VF991_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018858734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEX9556157.1"
                     /translation="MTVERFLHAIDGISTWVGKAAAWLIILLMSVVCLEVFKRYIMNA
                     PTAWIFDLDNMLYGSLFMLCGAYTLSQNAHVRGDFLYSSMRPRTQAALDLLLYFVFFF
                     PGIAALVYAGLDYAGDSWRISEHSNVTADGPPVYHFKTVIPIAGALVLLQGVAEVVRC
                     VVCLKTGFWPSRLKDVAEIDVVEEQLAHSEYVDDESRKLAIANVQQIDEAARQRGMGG
                     DNKI"
     gene            839..>2094
                     /locus_tag="VF991_06660"
     CDS             839..>2094
                     /locus_tag="VF991_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011976072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX9556158.1"
                     /translation="MSDPALGLLMLTLIVVVIMMGFATAFTLMGLGIIFGFIAFYDPA
                     QSWTHNKVFDLMVQRTYGAMTNDVLISIPLFVLMGYVMERGALVDKMFYSIQLAFRRV
                     PAALAVATLIVCTFWGIASGLVGAVVVLMGVIAFNPMLRAGYDVKLAAGVITAGGTLG
                     ILIPPSVMIIVYAAVAGQSVVKLYAAAMFPGFFLSFLYLIYIVGWALLDPKIAPALPE
                     EQTRVPVPGWVEKFQAAYSRNLLVGFLASLVSPGRAASIDAEGKRLGYGALLLNFVTA
                     LVPFLVVVLTMAGLWWYVVIHQQVSEAAEVAGVQQLGTPGIATAPATEAELGPSSGFF
                     IWFAVISALLALMLVRYYWRMDAARFVVLKLLTASVMPLGILTVVVLAVILFGITTAT
                     ESAAVGAAGAFLLAFQARTLDWKRTK"
BASE COUNT          309 a          688 c          673 g          424 t
ORIGIN      
        1 agctgtaggg tgaaagcaga cgagcagtct tgccctcccc acgctttgcg tggggaggtg
       61 cccgcgcagc gggcggaggg gtcatgcgcg gcgcgacgtg cctggttcat gacccctccg
      121 gcctgcggcc agctccccag cttcgctggg gaggaagaga atagagccat cccatgacag
      181 ttgagcgttt cctgcacgcg atcgacggca tcagcacgtg ggtcggcaag gccgcggcgt
      241 ggctcatcat cctgttgatg agcgtcgtct gcttggaagt cttcaagcgc tacatcatga
      301 acgcgccgac ggcgtggatc ttcgacctcg acaacatgct gtacggctcg ctgttcatgc
      361 tgtgcggcgc ctacacgctg tcgcagaacg cccacgtacg cggcgacttc ctctacagct
      421 cgatgcgccc gcgcacccag gcggcgctcg acctgctgct ctacttcgtc ttcttctttc
      481 ccggcatcgc cgccctggtt tatgccggac tggactatgc cggcgactcc tggcgcatat
      541 cagagcattc caacgtcacc gccgacggcc cgccggtcta ccatttcaag accgtgatcc
      601 cgatcgccgg ggcgctggtg ttgctgcagg gcgtggccga ggtcgtgcgc tgcgtggtct
      661 gcctaaaaac cggtttctgg ccgtcgcggc tgaaggacgt ggccgagatc gacgtggtcg
      721 aggagcagct cgcgcacagc gaatatgtcg atgacgaatc gcgcaaactc gccatcgcca
      781 atgtgcagca gatcgacgag gcggcgcgac aacgcgggat gggcggagac aacaagatat
      841 gagcgatccc gcactcggcc tcttgatgct aaccctaatc gtcgtcgtga tcatgatggg
      901 gttcgcgacg gccttcaccc tgatggggct gggcatcatc ttcggtttca tcgccttcta
      961 cgatcccgcg caatcatgga cgcacaacaa ggtcttcgac ctgatggtcc agcgcaccta
     1021 tggcgccatg accaacgacg tgctgatctc gattccgctg ttcgtgctga tgggctatgt
     1081 catggagcgc ggcgcactgg tcgacaagat gttctattcg atccagctcg cctttcgtcg
     1141 cgtgccggcg gcgctcgcgg tggcgacgct gatcgtctgc accttctggg ggattgccag
     1201 cggcctggtc ggcgcggtcg tggtgctgat gggcgtcatc gccttcaacc cgatgctgcg
     1261 cgcgggctat gacgtcaagc tcgccgccgg ggtcatcacc gcgggcggca cgctcggcat
     1321 cctgatcccg ccctcggtga tgatcatcgt ctatgccgcc gtcgccggcc agtcggtggt
     1381 gaagctctac gccgcggcga tgttcccggg cttcttcctg tcgttcctct acctcatcta
     1441 catcgtcggc tgggcgctgc tcgatcccaa gatcgccccg gctttgcccg aggagcagac
     1501 gcgtgtgccg gtgccgggct gggtcgagaa attccaggcg gcctattcgc gcaacctgct
     1561 ggtgggcttc ctcgcttcgc tggtctcgcc gggccgggcc gcttccatcg acgccgaggg
     1621 caagcgcctg ggctacggcg ctctgctctt gaacttcgta acggcgctgg tgcccttcct
     1681 ggtcgtcgta ctcaccatgg cgggcctgtg gtggtatgtc gtcatccacc agcaggtgag
     1741 cgaggccgcc gaggtggccg gcgtgcagca gctcggcacg ccgggcattg ccaccgcacc
     1801 cgcgaccgag gccgagctcg gcccgtcgag cggcttcttc atctggttcg cggtcatctc
     1861 ggcgctcttg gcgctgatgc tggtgcgcta ctactggcgc atggacgccg cgcgcttcgt
     1921 cgtgctgaag ttgctcaccg cctcggtgat gccgctcggc atcctgacgg tggtcgtgct
     1981 ggcggtgatc ctgttcggca tcacgacagc caccgaatcg gccgcggtcg gcgcggccgg
     2041 cgccttcctg ctcgccttcc aggcacgcac gctcgactgg aagcgcacca agga
//
LOCUS       DASWGA010000275         3725 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2061298, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000275 DASWGA010000000
VERSION     DASWGA010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3725
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2061298"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..663)
                     /locus_tag="VF991_06665"
     CDS             complement(<1..663)
                     /locus_tag="VF991_06665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006469033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEX9556159.1"
                     /translation="MAGAPAETRPSPDALLKAAEKEARGKLKIFLGAAPGVGKTYEML
                     VAARRAKAAGVDVVAGLVETHGRAETEAQLAGLEVVPRRQIEYKGRKLEEMDIDAILK
                     RRPALVLVDELAHTNAEGSRHPKRYLDVEELLAVGIDVYSTLNVQHIESLNDVVARIT
                     RIRVRETVPDRIVDAADEVELVDLTPADLMARLREGKVYVREQAQRALRHYFSPGNLT
                     ALR"
     gene            complement(803..1405)
                     /locus_tag="VF991_06670"
     CDS             complement(803..1405)
                     /locus_tag="VF991_06670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HEX9556160.1"
                     /translation="MLKEIRPAIVMMVCFIILTGLAYPLAMTGIAQLLFPQQASGSLI
                     VKDGKVIGSELIGQNFADARYFHGRPSATSDTDPNDATKTVPAPYNAANSSGSNAGPT
                     SKPLIERVQGDADKLKAENPNTAVPVDLVTSSASGLDPHITPAAAFFQVPRVAKARGL
                     PEAKVRDLVTQHVEGRFLGLLGEPRVNVLQLNMALDALRP"
     gene            complement(1416..3458)
                     /gene="kdpB"
                     /locus_tag="VF991_06675"
     CDS             complement(1416..3458)
                     /gene="kdpB"
                     /locus_tag="VF991_06675"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HEX9556161.1"
                     /translation="MAVTTLSDPRILAPALLDAVRKLNPRVMIRNPVMFTVEVVASLT
                     TILFVRDLVTGAGGWGFAFQINLWLWFTVLFANFAEAVAEGRGKAQAATLRKAKTETV
                     AKRLADASATKWETLPAARLRKGDIVLVEAGDLIPSDGEVIEGVASVNEAAITGESAP
                     VIRESGGDRSAVTGGTQVISDWIKVVITAQPGSTFLDRMIALVEGAERQKTPNEIALN
                     ILLAGMTIIFVFSVASIPSFATYAGGTMTVLVLVALFVTLIPTTIGALLSAIGIAGMD
                     RLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTITLGNRQATEFLPVAGINERDLADAAQ
                     LASLSDETPEGRSIVVLAKEKYDIRGREMAPLHAKFIAFSAYTRISGIDVDGASIRKG
                     AVDAIIADVKAASTAPLVAREVEVIADRIAKSGGTPLAVSKDGKLLGVIHLKDIVKGG
                     IKERFATLRRMGIRTVMITGDNPVTAAAIAAESGVDDFLAQATPEAKLKLIREEQAQG
                     KLVAMCGDGTNDAPALAQADVGVAMNTGTMAAREAGNMVDLDSDPAKLIEIVEIGKQL
                     LMTRGALTTFSIANDVAKYFAIIPAMFLAFYPQLQAMNVMHLHTPQSAILSAIIFNAL
                     IIIALIPLALRGVQYRPVGASSVLVRNLLIYGVGGIIVPFIGIKLIDLAITAIGLA"
     gene            complement(3503..>3725)
                     /locus_tag="VF991_06680"
     CDS             complement(3503..>3725)
                     /locus_tag="VF991_06680"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011655123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HEX9556162.1"
                     /translation="GRFLMIVPMIAIAGSLAAKKIVPASGGTFPTNGPLFVGLVVGVI
                     LIVGGLTFFPALALGPIVEHFAMVAGTLY"
BASE COUNT          617 a         1194 c         1276 g          638 t
ORIGIN      
        1 gcgcagcgcc gtgaggttgc cgggcgagaa ataatggcgc agcgcgcgct gggcctgctc
       61 gcggacatag accttgccct cgcgcagccg cgccatcagg tcggccggcg tcagatcgac
      121 cagctcgacc tcgtcggcgg cgtcgacgat gcggtcaggc acggtctcgc gcacacggat
      181 gcgggtgatg cgcgccacca catcgttcag gctctcgatg tgctgcacgt tcagggtcga
      241 atagacatcg atgcccacag ccagcaattc ctcgacgtcg agatagcgct tgggatgccg
      301 gctgccttcg gcgttggtgt gggcgagctc gtcgaccagg accagtgccg gccggcgttt
      361 caggatggca tcgatgtcca tctcttcgag cttgcggccc ttgtactcga tctgccggcg
      421 cggcacgacc tcgaggccgg cgagctgcgc ttcggtctcg gcacgtccgt gcgtctccac
      481 caagccggcc acgacgtcga cgcccgcggc cttggcccgg cgcgcggcca ccagcatctc
      541 gtaggtcttg ccgacgcccg gcgccgcacc gaggaagatt ttcagcttgc cgcgcgcctc
      601 cttctccgcc gccttcagca gcgcgtcggg cgaggggcgt gtctcagcag gagctccggc
      661 catggaagtt agtaccaacg ttcctggacg gtgttataca ccctacgcaa ggcgttttct
      721 gtcgtcctga gcgcagcgaa ggacctcatc gacgcttgcg accggcataa gatcctcgct
      781 gcgctcagga tgacagcgag cactagggcc gcagagcgtc gagggccatg ttgagctgca
      841 ggacattgac gcgcggctcg ccgagcaggc cgaggaagcg gccttcgaca tgctgcgtga
      901 ccagatcgcg gaccttggcc tcgggcaggc cgcgcgcctt ggccacgcgc ggcacctgga
      961 agaaggcggc cgccggcgtg atgtgcggat cgaggccgct cgcggagctc gtgacgaggt
     1021 cgaccggcac ggctgtattg ggattctcgg ccttgagctt gtcggcgtcg ccctggacgc
     1081 gctcgatcag cggcttagag gtcggccccg cattgctgcc cgacgaattg gcggcgttgt
     1141 agggcgcggg caccgtcttg gtcgcgtcgt tggggtcggt gtcggaggtc gccgagggcc
     1201 ggccgtggaa gtacctggcg tcggcgaagt tctggccgat cagctcggag ccgatcacct
     1261 tgccgtcctt cacgatcagg ctgccgctgg cctgttgcgg gaagaggagc tgggcgatgc
     1321 ccgtcatggc tagcggatag gcaaggccgg tcagaatgat gaaacagacc atcatgacga
     1381 tggcggggcg gatttccttc agcatgtaaa agtcctcacg caagaccgat ggcggtgatc
     1441 gccaggtcga tcagcttgat gccgatgaac ggcacgatga tgccgccgac gccgtagatc
     1501 agcagattgc gcaccagcac cgaagacgca ccgaccgggc ggtactggac gccccggagc
     1561 gccagcggga tgagggcaat gatgatcagc gcattgaaga tgatcgccga caggattgcg
     1621 ctttgcggcg tgtgcagatg catgacgttc atcgcctgga gctgcggata gaaggcgagg
     1681 aacatcgccg ggatgatggc gaagtacttt gccacgtcgt tggcgatcga gaacgtcgtc
     1741 agcgcgccac gcgtcatcag caactgcttg ccgatctcga cgatctcgat gagcttggcc
     1801 gggtcgctgt cgagatcgac catgttgccg gcctcgcgcg cggccatggt gccggtgttc
     1861 atggcgaccc cgacatcggc ctgggcgagc gccggcgcat cgttggtgcc gtcgccgcac
     1921 atcgccacca gcttgccctg ggcctgttcc tcgcgaatga gtttcagctt ggcttccggc
     1981 gtcgcctggg cgaggaagtc gtcgacgccc gattcggcgg cgatcgcggc ggccgtcacc
     2041 gggttgtcgc cggtgatcat gacggtgcgg atgcccattc ggcgcaaggt cgcgaagcgc
     2101 tcttttatgc cgcccttgac gatgtccttg aggtggatca cgcccaagag cttgccgtcc
     2161 ttcgatacgg cgagcggcgt gccgcccgac ttggcgatcc tatcggcgat cacttcgacc
     2221 tcgcgagcga caagcggcgc ggtcgaggcg gctttgacat cggcgatgat ggcatccact
     2281 gcgcccttgc ggatcgaggc gccgtcgacg tcgatgccgc tgatgcgggt ataggccgag
     2341 aacgcgatga acttggcgtg cagcggcgcc atctcgcggc cgcggatgtc gtacttttcc
     2401 ttggccagca ccacgatcga ccggccctcg ggcgtttcgt cggacagcga ggcgagctgg
     2461 gcggcatccg ccagatcgcg ctcgttgatg cccgcgaccg gcaggaactc ggtcgcttgg
     2521 cggttgccca gcgtgatggt gccggtcttg tcgagcagca gcgtgtcgac gtcgcccgcc
     2581 gcctcgacgg cgcggcccga catggcgagc acgttgaagc gcaccaggcg gtccatgccg
     2641 gcgatgccga tcgccgacag caaggcgccg atcgtggtcg gaatcaaggt cacgaacagc
     2701 gcgaccagca ccagcaccgt catggtgcct ccggcatagg tggcgaagct cgggatcgac
     2761 gccaccgaga agacgaagat gatggtcatg ccggcgagca ggatgttgag cgcgatctcg
     2821 ttcggcgtct tctgccgctc cgctccttcg accagcgcga tcatgcggtc gaggaaggtc
     2881 gaaccgggct gcgcggtgat gacgaccttg atccagtcgg aaatgacctg ggtgccgccg
     2941 gtgacggccg aacggtcgcc gccgctttcg cggatgaccg gcgccgactc gccggtgatc
     3001 gccgcctcgt tgaccgaggc cacgccttcg atcacctcgc cgtcggacgg aatgagatcg
     3061 cccgcctcga ccagcacgat atcgcccttc ctgagcctgg ccgccggcaa ggtctcccac
     3121 ttggtggccg acgcgtccgc caggcgcttg gcgaccgtct cggtcttggc cttgcgcaag
     3181 gtggcggcct gcgccttgcc gcggccctcg gcgacggctt cggcgaagtt ggcgaacagc
     3241 accgtgaacc agagccagag attgatctgg aaggcaaagc cccacccacc cgcgccggtg
     3301 acgagatcgc ggacgaacag gatggtcgtc agcgacgcga ccacctccac cgtgaacatc
     3361 acggggttgc ggatcatcac acgcgggttg agcttcctga cggcgtccag aagcgcgggc
     3421 gccaggatcc tggggtcgct cagcgtggtg acggccatcc gctggcgcgg cgaaagtgcg
     3481 agttccatcg tctgtcctca actcaataaa gcgttccggc aaccatcgcg aagtgctcga
     3541 cgatcgggcc gagtgccagt gcggggaaga acgtgaggcc gcccacgatc aggatcacgc
     3601 cgaccaccag gccgacgaac agcgggccgt tggtcgggaa ggtgccgccc gacgccggca
     3661 cgatcttctt ggcggcgagc gatcccgcga tcgcgatcat cggcacgatc atcaggaagc
     3721 ggccg
//
LOCUS       DASWGA010000276         4909 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1041419, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000276 DASWGA010000000
VERSION     DASWGA010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4909
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1041419"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..625)
                     /locus_tag="VF991_06685"
     CDS             complement(14..625)
                     /locus_tag="VF991_06685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9556163.1"
                     /translation="MRDANGWSPDPERDKAETRRLVEQARLGDRADPLTMSFTGFAIA
                     KVLNDLDAGIALIDRALALTPNLAAALAHSGYVRVWLGEPDKAIDHLQRAIRLSPLDP
                     SMFLMQAAMAMAHFVAGRDDEAFAWAEKASQRNPFLLAAALIAAASAANLGRVDDVAK
                     YVTRVHQLNATLTISTMPARMNLRRPQDRARMLDGLRKAGLPE"
     gene            complement(523..1809)
                     /locus_tag="VF991_06690"
     CDS             complement(523..1809)
                     /locus_tag="VF991_06690"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9556164.1"
                     /translation="MADERLDRRLSAVLAADVAGYSRLVGADEEGTLRRLKSLQADLF
                     LPSFAEHRGRLVKTTGDGLLAEFASVVDAVRCAVHLQRWLVVQNASVEPDKRIDLRIG
                     VHVGDIVVEKDGDILGDGVNVAARLEGLAQPGGICVSARVQEDVEGRLDVAFADQGEQ
                     QLKNIVRPVRVYRVVLNAMEDGQNAAPAMAPPAADAPDLADRPVIAVLPFQNMSADPE
                     QEFFADGVVEDIISSLAHYRYFDVIARNSTFTYKGRAVDVKQVGRELGARFVLEGSVR
                     KVGQRIRITAQLIDAATANHIWADRVEGMVDDLFELQDQVTASVVGAIEPEMRRAEMK
                     RAVRQPPPPISIPTCASCAAWPASTSGVGPASTRLCAWPIRRSSAIPDSARRTPWLSA
                     ATSCATPMAGRPTPSATRPKPGGWWSRRGWATAPIP"
     gene            complement(1958..2329)
                     /locus_tag="VF991_06695"
     CDS             complement(1958..2329)
                     /locus_tag="VF991_06695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9556165.1"
                     /translation="MFDHVSIGVADIARSKRFYDAALKPLGYSRLSDGETSLGYGDKA
                     VALWLGATNKPVNPDLDSGLHFCFVAKDHAAVDAFHAAAVKAGGKDNGAPGLRADYGP
                     KYYAAFAIDPDGYRIEAHCGK"
     gene            2421..2972
                     /locus_tag="VF991_06700"
     CDS             2421..2972
                     /locus_tag="VF991_06700"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABATE domain-containing protein"
                     /protein_id="HEX9556166.1"
                     /translation="MNRPDLCLEFVNTRFWRGQAEPTETLKAPEDLAAWMAANGGLRS
                     PKLPTRREFERAIEMRETLHRLFDAEAQDKTAASRDLDAVNAALAAAPARTTLRRERG
                     AYGWDVDIKSATALALLAPVLWSAGDLLVGPRLDRVRRCANPECGWLFLDDSRAGKRR
                     WCSMQSCGNRAKARRHYHRSREQ"
     gene            3088..4860
                     /locus_tag="VF991_06705"
     CDS             3088..4860
                     /locus_tag="VF991_06705"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9556167.1"
                     /translation="MTQERVERRLTAILAADVAGYSRLMGVDEEGTLAALKKVRREVI
                     DPKIAEHRGRIVQTSGDGLLVEFASVVDAVRCAVEIQREMAQRNAGVPQERSIEFRIG
                     INLGDIMVDEKDIFGDGVNVAARLETLAEPGGICVSRVVRDQVRDKLAVSFESMGEQQ
                     VKNIARPVRAYRAVLGESPRAASTPPKTMAPRPLADRPSIAVLPFKNVTGDPEQGYFV
                     DGITEDIITALSKWRWFLVIARNSTFAYQGKSVDLKQVQSDLGVRYVLEGSVRKAGRR
                     VRITCQLFDATNGANLWAERYDRDLTDIFAVQDEITSRVVAAIEPALSRAETKRGAAK
                     QPEHMGAWDYCQRGFWHLNKLTGTDGAAAYGLFKTAVALDPELAEAHLGLARALIAQW
                     DYGSVEDFAPLVREATQSALRAAELDGENPYAQYVLAQTSHWAGDAQAAIAYASRAVE
                     LNENFALGHFYLGVALNLDGRHQEALEALEMGLRLSPRDPRMSTWLANKARALYHLHR
                     YAEAIEAAAAARRIQPHAYGSLVLVASCAQLGRNEEAAEVLAELRALPDGSAKIASWY
                     LDRYSDATARAHMADGLGKAGVLG"
BASE COUNT          833 a         1615 c         1641 g          820 t
ORIGIN      
        1 accggcacct agatcattcg ggaaggccgg ccttgcgcag gccgtcgagc atgcgggcgc
       61 gatcctgcgg ccggcgcagg ttcatgcgcg ctggcatggt cgaaatcgtc agcgtggcat
      121 tgagctggtg cacacgggtg acgtacttgg cgacgtcgtc gacccggccg aggttggcgg
      181 cactcgccgc agcgatcagc gccgccgcga gcaggaaggg attgcgctgc gacgccttct
      241 ccgcccaggc aaaggcctcg tcgtcgcggc cggcgacgaa atgggccatc gccatcgccg
      301 cctgcatcag gaacatgctg ggatcgagtg ggctcagccg tatggcgcgc tgcaggtgat
      361 cgatcgcctt gtcgggttcg cccagccaga cccgcacgta tccgctatgg gcgagggcgg
      421 ccgccagatt gggcgtcaag gccaacgccc gatcgatcag cgcgatgccc gcgtcgagat
      481 cgttgaggac cttggcaatc gcgaagcccg tgaaactcat cgtcaaggga tcggcgcggt
      541 cgcccagccg cgcctgctcc accagccgcc tggtttcggc cttgtcgcgc tcggggtcgg
      601 gcgaccagcc attggcgtcg cgcacgatgt agcagccgag agccagggcg tacgacgggc
      661 tgaatccggg atcgcgctcg atcgcctgat aggccaggcg cagagcctcg tcgaagccgg
      721 ccctactcca cttgttgagg ctggccaggc cgcgcatgac gcacaagtag gtatcgagat
      781 cggtgggggg ggctggcgaa ccgcccgttt catctcggcg cgcctcatct ccggctcgat
      841 cgccccaacg acacttgccg tcacctggtc ctgcagctcg aacaggtcgt cgaccatccc
      901 ctcgacgcga tcggcccaga tatggttggc ggtcgcggcg tctatgagct gcgccgtgat
      961 gcggatgcgc tgcccaacct tgcggacgct gccctcgagc acgaagcggg cgccgagctc
     1021 gcggccgacc tgcttcacgt cgaccgcgcg gcctttgtag gtgaaggtgg agttgcgggc
     1081 gatgacgtcg aaatagcgat agtgcgccag gctggagatg atgtcctcga ccacaccgtc
     1141 ggcaaagaac tcctgctccg ggtcggcgct catgttctga aacggcagga ccgcgatcac
     1201 cggccggtcg gccaagtcag gcgcgtccgc tgccggcggc gccatcgcgg gcgcggcgtt
     1261 ctgtccgtcc tccatcgcgt tgagcacgac gcgatagacg cgcaccggcc ggacgatgtt
     1321 cttgagctgc tgctcgccct ggtcggcgaa ggcgacatcg agccggcctt cgacgtcctc
     1381 ctgcacccgt gccgagacgc agatgccgcc gggctgggca aggccttcga ggcgggccgc
     1441 cacgttcacg ccatcgccca ggatgtcgcc gtccttttcc acgacgatgt cgccgacatg
     1501 gacgccgatg cgaaggtcga tccgcttgtc gggctccacg ctggcgttct gcaccaccag
     1561 ccagcgctgc aggtggacgg cgcagcggac cgcgtcgacg acgctggcga attcggccag
     1621 caagccgtct cccgtcgtct tcaccagacg gccacggtgt tcggcgaagc tggggaggaa
     1681 caagtcagcc tgaagggatt tcagccgccg gagcgtgcct tcctcgtcgg cgccgaccag
     1741 ccggctgtag cccgcgacat ccgcggcgag aacggccgaa agccttcggt cgagccgttc
     1801 atcggccaag aaagtctcct cggtaggcgg tcccagatgc ctatttgtac atcggaatca
     1861 gccaaccggt ctctaattcc ttgccttggc aagccgcgct ccggcgagcg tcgggctcaa
     1921 tggcgaagct tcagcgcgcg tgcacgcacg acgccgacta ttttccgcag tgggcctcga
     1981 tgcggtagcc gtcgggatcg atggcgaagg cggcgtagta cttggggcca tagtcggcgc
     2041 gcaggccagg cgctccattg tccttgccgc cggccttgac ggcggcggca tgaaacgcgt
     2101 cgaccgccgc gtggtccttg gcgacgaagc agaagtggag gcccgagtcc aagtcgggat
     2161 tcaccggctt gttggtggcg ccgagccaca gcgccaccgc cttgtcgccg tagccgagcg
     2221 aggtctcgcc gtcgctgagg cggctgtaac cgagcggctt cagcgccgcg tcatagaacc
     2281 tcttggagcg ggcgatgtcg gcgacgccga tggatacatg gtcgaacatg gtttgctcct
     2341 ctataactga ttaaccggtt atatagttat taaggacgat gcgccttgtc aaccggtcaa
     2401 ccggttatta agtctgaacg atgaatcgcc ccgacctctg cctggagttc gtcaatacgc
     2461 gcttctggcg cggccaggcc gagcccacgg aaacgctgaa ggcaccggaa gacctcgccg
     2521 cctggatggc agccaacggc ggcctgcgtt cgccgaagct gccgacgcgg cgcgaattcg
     2581 agcgggcgat cgaaatgcgc gagacgctgc atcgcctgtt cgacgccgag gcccaggaca
     2641 agaccgcggc atcgcgcgac ctggacgccg tgaacgcggc gctggcggcg gcacctgccc
     2701 gcacgacgct gcggcgcgag cgtggcgcct atggctggga tgtcgacatc aagtcggcaa
     2761 cggcgctggc gctgctcgcc ccggtgctgt ggtcggccgg cgacctttta gtcggtccgc
     2821 ggctcgatcg cgtgcgccgc tgcgccaatc cggagtgcgg ctggctgttc ctcgacgaca
     2881 gccgcgccgg caagcggcgc tggtgctcca tgcagagctg cggcaaccgc gccaaggcac
     2941 ggcgtcacta ccatcgcagt cgcgagcaat agcccaaagg gctatagtgc cggcggagct
     3001 tcgcgcgtcc gtgctgacct gctgcgggcg ggcgcacggc gatgcacgtc aggataggtt
     3061 cttgggccat tccctaaggc ggcggcgatg acacaggaac gcgtcgagcg acgcctgacg
     3121 gcgatcctgg cggccgacgt cgccggctat tcccgcctga tgggtgtcga tgaagaaggc
     3181 actctcgctg ctcttaagaa agtgcggcgc gaggtcattg accccaagat cgcggagcat
     3241 cgcggccgca tcgttcaaac gagtggcgac ggcctgcttg tcgaattcgc aagcgtggtc
     3301 gatgcggtgc gctgcgcggt cgaaatccag cgcgaaatgg cgcagcgcaa tgccggcgtg
     3361 ccgcaggagc gatccatcga atttcgcatc ggcatcaatc tcggcgacat catggtcgat
     3421 gagaaggata tcttcggcga tggtgtcaac gtcgcggcgc gcctcgaaac cctggccgaa
     3481 ccgggaggga tctgcgtcag ccgggtcgtg cgcgaccagg tgcgcgacaa gctcgccgtt
     3541 tcgttcgaga gcatgggtga gcagcaggtc aagaacatcg cccggccggt gcgcgcctat
     3601 cgcgccgttc tcggtgaaag cccacgcgct gcctcgactc cgccaaagac catggcgccg
     3661 cggccgctgg ccgacaggcc atcgatcgcc gtcctgccgt tcaagaacgt gaccggcgat
     3721 cccgagcagg gatacttcgt cgacggcatc accgaggaca tcatcacggc gttgtcgaaa
     3781 tggcgttggt ttctcgtcat cgcccgcaat tcgacgttcg cctaccaggg aaagtctgtc
     3841 gatctgaagc aggttcagag cgacctcggt gttcgctatg tcctcgaagg cagcgtgcgc
     3901 aaggccgggc ggcgcgtgcg catcacctgc cagctgttcg atgcgacgaa cggcgccaat
     3961 ctgtgggccg agcgctacga ccgcgatctg accgacatct tcgcggtaca ggacgagatc
     4021 acctcgcgag tcgtcgctgc aatcgagccg gcgctatcgc gcgccgagac caagcgcggc
     4081 gccgccaagc agcctgaaca tatgggggct tgggattatt gccagcgcgg cttctggcac
     4141 ctcaacaagc tcacgggaac cgatggagcg gcagcctatg gcttgttcaa gacggccgtg
     4201 gcgctcgatc ccgaactcgc cgaggcacat ctcgggcttg cccgcgcgct gatcgcgcaa
     4261 tgggactacg gctccgttga ggacttcgct cccttggtgc gtgaggcgac gcaatccgcc
     4321 cttcgcgcgg cggagctcga tggcgagaac ccatatgccc aatacgtgct tgcccagacg
     4381 agccactggg cgggcgacgc ccaggcggcc atcgcctatg cgagccgcgc ggtcgagctg
     4441 aacgagaact tcgctcttgg ccatttctac ctgggggtcg cgttgaacct cgatggccgc
     4501 catcaggagg ctctcgaagc gctcgagatg ggcttgcgcc tcagcccgcg cgatccccgg
     4561 atgtcgacct ggctcgccaa caaggcgcga gcgctttatc acctgcaccg ctacgccgag
     4621 gcgatcgagg cggcagcggc cgctcggcgc atccagcccc acgcctacgg ctcccttgtc
     4681 ctggtcgcga gctgcgccca gctcgggcgc aatgaagaag ccgcggaagt cctggccgag
     4741 ctgcgcgccc tgccagacgg cagcgccaaa atcgcgagct ggtatctcga ccgctattcc
     4801 gacgctaccg cccgcgcgca catggccgat ggtctcggca aggcaggcgt tctcggatga
     4861 aagtcgccgt cgacagccgc ggtagcaagc ggcgctggtg tcccatgca
//
LOCUS       DASWGA010000277         2488 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1296363, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000277 DASWGA010000000
VERSION     DASWGA010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1296363"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..287
                     /locus_tag="VF991_06710"
     CDS             <1..287
                     /locus_tag="VF991_06710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEX9556168.1"
                     /translation="APVGKAYFGFTDEELRWLGKWVRDHTTNRFGPVREVSPDLVLEI
                     AFDGIARSTRHKSGLAMRFPRINRIRTDKPAAEADTIDNLLRLVPSPTHG"
     gene            280..1665
                     /locus_tag="VF991_06715"
     CDS             280..1665
                     /locus_tag="VF991_06715"
                     /inference="COORDINATES: protein motif:HMM:NF021523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2252 domain-containing protein"
                     /protein_id="HEX9556169.1"
                     /translation="MVETSPGALPPQTHTLPLKERAELGRALRDRVARKQHGAWKPPA
                     NRRDPIEILIEQGESRLPDLLPVRYARMKATPFTFLRGAAAVMAADLAATPASGLMVQ
                     AAGDCHCLNFGGFATPERRLAFDINDFDETAVAPWEWDVKRLAASFVVATLDVLAKEA
                     RSELAEIAARSYRETMAEVAATPVLDAWYRALNIDDENEAAAIGIGARAVRKVGAARA
                     HPVEIASIGHRGGDAPHIEDNPEHGVYHPAPADAAAFRAAVDAAMVDYADSLTPERRT
                     LLQRYRLADAAYKVVGVGAVGTLCGVLLMVSGDGEALYLQFKEATRSVLETYAGASPY
                     AHHGERVVRGQRLLQAASDMLLGFATGPTGRHLYLRQLRDAKIKPQLETMTPRNFRRY
                     AATCGEVLARAHARTADAVVLSAYLGKSAAFDEAIGAFATDYGRQTEKDHAALLKAIK
                     SRRLPSQGDIS"
     gene            1733..>2488
                     /gene="moaA"
                     /locus_tag="VF991_06720"
     CDS             1733..>2488
                     /gene="moaA"
                     /locus_tag="VF991_06720"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019008 - molybdopterin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0061798 - GTP 3',8'-cyclase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEX9556170.1"
                     /translation="MIDPFGRSITYLRVSVTDRCDFRCVYCMAEDMTFLPKAEVLSLE
                     ELERLCAAFIRRGVKKLRLTGGEPLVRKNVMSLIRGLGRHLDSGALSELTLTTNGSQL
                     AKYAKELAAVGVRRLNVSMDTLDRDKFRELTRWGELDQVMRGLDAAQQAGLHVKINAV
                     ALRGVNDMEFDELIRWSHGRGMDLTLIEVMPMGEIGADARLDQYLPLSLARAEIAKHF
                     TLTETDYRTGGPARYFKVEETGGRLGFITPLTHN"
BASE COUNT          411 a          869 c          814 g          394 t
ORIGIN      
        1 tggcgccggt tggcaaggcc tatttcggct tcaccgacga ggagctgcgc tggctcggca
       61 aatgggtgcg tgatcacacg accaaccgct tcggcccggt gcgcgaggtc tcgcccgacc
      121 tggtgctgga gatcgccttc gacggcatcg cccgctcgac ccgccacaag tcgggcctcg
      181 ccatgcgttt cccgcgcatc aatcgcataa ggactgacaa gccggcggcc gaggccgaca
      241 ccatcgacaa cctgctgcgg ctcgtgccat caccaaccca tggttgagac atcgcccggc
      301 gccctgccgc cgcaaaccca caccctgccg ctcaaggagc gggccgaact cggccgcgcg
      361 ttgcgcgatc gcgtggcgcg caagcagcac ggtgcctgga agccgccggc caaccgccgc
      421 gatcctatcg agatcctgat cgagcagggc gaatcgcgcc tgcccgacct gctgcccgtg
      481 cgctatgcgc gcatgaaggc gacacccttc accttcctgc gcggcgccgc ggccgtgatg
      541 gcggccgatc ttgcggccac gccggccagc gggttgatgg tgcaggccgc aggcgattgc
      601 cattgcctca atttcggcgg cttcgccacg cccgagcggc ggcttgcctt cgacatcaac
      661 gacttcgacg agacggcggt ggcgccctgg gagtgggacg tcaagcgcct ggccgcgagc
      721 ttcgtcgtcg ccacgctcga cgtcttggcc aaggaggcac gcagcgagct cgcagagatc
      781 gcggcgcgca gctatcgcga gaccatggcg gaggtcgcgg ccacgccggt gctcgacgcc
      841 tggtatcgcg cgctcaacat cgacgacgag aatgaagccg cagcgatcgg catcggcgcg
      901 cgagcggtgc gcaaggtcgg cgcggcgcgc gctcaccccg tggagatcgc gtcgatcggt
      961 catcgcggag gcgacgcccc ccacatcgag gacaaccccg agcacggcgt ctatcacccc
     1021 gcgcccgccg atgccgccgc ctttcgcgcc gccgtggacg cggcgatggt cgactatgcg
     1081 gactcgctca cgcccgagcg gcgcacgctg ctgcagcgct atcgcttggc cgacgccgcc
     1141 tacaaggtcg tgggagtcgg tgcggtcggc acgctgtgtg gcgtcctgct gatggtttcg
     1201 ggcgacggcg aggccctgta cctgcagttc aaggaagcga cccgctcggt gctcgaaacc
     1261 tatgccggtg cgagtcccta tgcccatcac ggcgagcgcg tggtgcgcgg tcagcgcctg
     1321 ctgcaggcgg cgagcgacat gctgctgggc ttcgccaccg gcccgaccgg ccggcacctc
     1381 tacctgcgcc aattgcgcga cgccaagatc aagccacagc tcgagaccat gacgccgcgc
     1441 aatttccgcc gttatgccgc gacctgcggc gaggtgctgg cgcgcgcgca tgcgcgtacg
     1501 gcagatgcgg tggtgctgtc ggcctatctc ggcaaaagtg cggccttcga cgaggccatc
     1561 ggcgccttcg ccaccgacta cggccggcag accgaaaagg accatgcggc cctgttgaaa
     1621 gccataaaaa gccgccgttt gcccagccaa ggcgacattt catagcgtcc aatagcccct
     1681 tgcaggggcg ttgcagcgtg cccattatcc gggcgtctct aacggaaatg ccatgatcga
     1741 cccattcggt cgctccatca cctatctgcg cgtctcggtc acggatcgct gcgacttccg
     1801 ctgcgtctat tgcatggccg aggacatgac cttcctgccc aaggccgagg ttctctcgct
     1861 cgaggagctc gagcgcctgt gcgcggcctt catccggcgc ggcgtcaaga agctccggct
     1921 gaccggcggc gaaccgctgg tgcgcaagaa cgtgatgtcg ctgatccgcg ggctcggccg
     1981 ccatctcgac agcggtgcgc tcagcgagct caccttgacc accaacggca gccagctcgc
     2041 caaatacgcc aaggagctgg ccgcggtcgg cgtgcgccgg ctgaacgtgt cgatggacac
     2101 gctcgaccgg gacaagtttc gcgaattgac tcgctggggc gagctcgatc aggtgatgcg
     2161 cggcctcgat gccgcccagc aggcgggcct tcacgtcaag atcaacgccg tggcgctgcg
     2221 cggcgtcaac gacatggaat tcgacgagtt gatccgctgg agtcacggcc gcggcatgga
     2281 cctgacgttg atcgaggtca tgccgatggg cgagatcggc gccgacgcac ggcttgacca
     2341 gtatttgccg ctgtcgctgg cgcgggccga gatcgccaag cacttcacct tgaccgagac
     2401 cgactaccgc accggcggcc cggctcgcta tttcaaggtc gaggagaccg gcggccggct
     2461 gggcttcatc acgccgctca cccacaat
//
LOCUS       DASWGA010000278         5110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2177597, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000278 DASWGA010000000
VERSION     DASWGA010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5110
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2177597"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="VF991_06725"
     CDS             <1..676
                     /locus_tag="VF991_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556171.1"
                     /translation="DSQWSPDGNYAMSSYIYDLDQLVHQQGLAPVTIIAHSLGGNICL
                     RYAGIYPAKVRKLVAIEGLGPSPKVIATRGSKSMGERMREWVDEQRKLSGRLPRRYPT
                     IEDAFKRMQEENKHLSSEQARHLTQQGVNQNEDGTYSWKFDNYVRAWPPYDMSYEDIE
                     ELWTQIACPTLLVYGKESWASNPEKDGRLKHFKGAKVVEFDHAGHWVHHDRLKDFVDT
                     AREFIT"
     gene            673..1692
                     /locus_tag="VF991_06730"
     CDS             673..1692
                     /locus_tag="VF991_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008144994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX9556172.1"
                     /translation="MKAAIFRGGDIVVDSLPEPVPARGQVLVKTLACGICGSDLHAAK
                     HAHRMVAVTKRIPGRVPMDLSRDIVFGHEFCCEVLDYGPDTEHRLKAGTRVCAMPLMM
                     EGDGPKGMGYSNTYVGGYAEQMLLAAPLMLEVPNGLATDHAALTEPLAVGVHAVEKAA
                     LAGDEAPLVIGCGPVGLAVIAALRLKGIRPIVAADFSPKRRELAVKMGADVVVDPAKE
                     QPYPKLAPAKRAAIFECVGVPGVLQQMFEQVPRDARLVVVGVCMEPDTIEPMFGIVKE
                     LSLQFVLGYTAEEFARSLGLLADGQVDAETLITGKVGLDGVKAAFGELANPERHTKIL
                     VEPWR"
     gene            1769..2383
                     /locus_tag="VF991_06735"
     CDS             1769..2383
                     /locus_tag="VF991_06735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEX9556173.1"
                     /translation="MKFYNSGGPNPRMVRMFMAEKGFEVPKVEIDLRGGENRREPYLK
                     INAAGQCPALELDDGTVLAEITAICEYVDEKKKDTPSLIGDTPEERARTRMWTRRIDL
                     NICEPAANGFRFAEGLKMFQNRIRCIPEAAAGLKATASDRLKWVDSLMGSKPFIAGDK
                     LTMADILLFAFLDFMANVGQPLDPECKTLTAWFGRMKARPSAAA"
     gene            2401..3558
                     /locus_tag="VF991_06740"
     CDS             2401..3558
                     /locus_tag="VF991_06740"
                     /inference="COORDINATES: protein motif:HMM:NF022100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NEW3 domain-containing protein"
                     /protein_id="HEX9556174.1"
                     /translation="MRRLTALFTFIASFILAAGLAQAADPPKGLFLLTDYPAQTVRAG
                     EIATIRVKLNNSGLPPEPVALSLSGVPAGWKIDILGGGLPIAAAMPGVNQDVSLQLRV
                     DVPKDAQAGSQKIVLSAKGTQSAELPLTLTVGSETPAKLSLKSRLPSLRGTPRSSFEY
                     TVTVGNDSGKDLTVALSAQAPANFQTTFTEGYGSNEISSIPIEAGQTKDIKVKVTPPR
                     DVKAGDYPVLIKAASEGATADIRVTLQISGQGKLALSTKDGRLSGEATAGKPSDFVLV
                     VSNDGTAPIEEVELSGTVPTGWKAEFNPKTIPSVAPNEKKEIQVQVTPSDKAIAGDYV
                     ASFRANGRGESASADFRITVTTSTMWGIVGIAIIAIALLVLLGAVARFGRR"
     gene            3566..4504
                     /locus_tag="VF991_06745"
     CDS             3566..4504
                     /locus_tag="VF991_06745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556175.1"
                     /translation="MADNVIEARGLSKLYGTQRAVDAIDLDIRRGEIFGLLGPNGAGK
                     TTAILMMLGLTDISGGSVEVLGYNPVREPLEVKRRVGYLPDSVGFYDHLTARENLVYT
                     ARLLGIPRSQTGRRIMEAMESVQLAEVIDKRVATYSRGMRQRLGIAEIVMKKAEVAIL
                     DEPTSGLDPHATVELLEMIRGLKRMGVAVLLSSHLLDRVQSVCDRVALFNKGRIALMG
                     TVVELANKVLGAGHPLLVEASGTDVVAALRGIEGVQRVMPDGERAWRVFADRDVRAAA
                     AQRIVSSGGSLTRLADLQPSLEEVYTRYFQDVRHAA"
     gene            4494..>5110
                     /locus_tag="VF991_06750"
     CDS             4494..>5110
                     /locus_tag="VF991_06750"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556176.1"
                     /translation="MPRKVRPRSAVRVGSPFTGLAPVFMKELADHLSSIRMMVLTLFV
                     IVFGAFPVASSLQQLKSAASAVSTLGPSEVFLFLRIFTIEPEQVQIPFFAALNFIIPL
                     MAIGLGFDSVNSEFNRRTLSRVLSQPIYRDALLLGKFLGGLTTLAVALVALWLIVLGS
                     GLVLLGIPPTGSEVARALGFLVVAIAYGGVWLAVAMLFSVIFRSTA"
BASE COUNT          863 a         1694 c         1710 g          843 t
ORIGIN      
        1 cgacagccaa tggtcgcccg acggcaacta tgcgatgtcg tcctacatct acgacctcga
       61 ccagctcgtc catcagcagg ggctggcgcc cgtgaccatc attgcccact cgctgggcgg
      121 caacatctgc ctgcgctacg ccggcatcta ccctgccaag gtacgcaagc tggtcgccat
      181 cgaggggctg ggcccgtcgc cgaaggtgat cgccacacgc ggctccaagt cgatgggcga
      241 gcggatgcgc gaatgggtcg acgagcagcg caagctgtcg ggccgcctgc cgcgccgcta
      301 tcccacgatc gaggacgcct tcaagcgcat gcaggaggag aacaagcacc tctcctccga
      361 gcaggcgcgg cacctcacgc agcagggcgt caaccagaac gaggacggca cctatagctg
      421 gaagttcgac aactacgttc gcgcctggcc gccctacgac atgagctacg aggatatcga
      481 agagctgtgg acccagatcg cctgtccgac gctgctggtc tacggcaagg agagctgggc
      541 ctccaatccg gagaaggacg gccggctaaa gcacttcaag ggcgccaagg tcgtcgagtt
      601 cgaccatgcc ggccactggg tgcatcacga ccggttgaag gatttcgtcg acacggcgcg
      661 ggagttcatc acatgaaggc ggcgatcttc cgcggcggcg acatcgtggt cgacagcctg
      721 cccgagccgg tgccggcccg cggccaggtc ctggtcaaga ccttggcgtg cggcatctgc
      781 ggctcggacc tgcatgccgc caagcacgcc catcgcatgg tggcggtgac caagcgcatc
      841 ccgggcaggg tgccgatgga cctgtcgcgc gacatcgtgt tcggccacga attctgctgc
      901 gaggtgctgg attacggacc cgacaccgag caccgcctca aggccggcac gcgcgtctgc
      961 gccatgccgc tgatgatgga gggcgacggg cccaagggca tgggctattc caacacctat
     1021 gtcggcggct atgccgagca gatgctttta gccgccccgc tgatgctgga agtgcccaac
     1081 ggcctggcga ccgaccatgc cgcgctgacc gagccgctgg cggtcggcgt gcatgccgtc
     1141 gagaaggcgg cactcgcggg cgacgaagcg ccactggtga tcggctgcgg gccggtcggg
     1201 ctcgccgtca tcgcggcgct ccggctgaaa ggcatccggc cgatcgtcgc cgccgacttt
     1261 tcgcccaagc ggcgcgagct ggccgtgaag atgggggccg acgtcgtcgt cgatccggcg
     1321 aaagagcagc cctatccgaa gctcgcgccg gccaagcggg cggcgatctt cgaatgcgtc
     1381 ggcgtgccgg gcgtcctgca gcagatgttc gagcaggtgc cgcgcgatgc ccgcctggtc
     1441 gtggtcggcg tctgcatgga gcccgacacg atcgagccca tgttcggcat cgtgaaggag
     1501 ctcagcctgc agttcgtgct gggctatacg gcggaggaat tcgcccgctc gctcggcctg
     1561 ctggccgacg gccaggtcga tgccgagacg ctgatcaccg gcaaggtcgg gctcgacggc
     1621 gtgaaggccg ccttcgggga attggccaat cccgagcggc acaccaagat tttggtggaa
     1681 ccgtggcgct gatcgtgggc tcttcctgtt gaccgcaagc cgggcgattt gatagcgctt
     1741 gcggccgctc agggaggagc aggagcaaat gaagttctat aattcgggcg ggccgaaccc
     1801 gcgcatggtt cgcatgttca tggccgagaa gggttttgag gtccccaagg tcgaaatcga
     1861 cctgcgcggc ggcgagaacc ggcgcgagcc ctatctcaag atcaatgcgg ccggccaatg
     1921 tccggcgctg gagctcgacg acggcaccgt gctggccgag atcacggcga tctgcgaata
     1981 cgtcgacgag aagaagaagg acacgccgtc gctgatcggc gatacgcccg aggagcgcgc
     2041 caggacgcgc atgtggacgc gccgcatcga tctcaatatc tgcgagcccg ctgccaacgg
     2101 cttccgcttc gccgaaggcc tgaagatgtt ccagaaccgt atccgctgca ttcccgaggc
     2161 ggctgccggg ctgaaggcca cggcgagcga caggctcaaa tgggtcgaca gcctgatggg
     2221 ctcgaaaccc ttcatcgccg gcgacaagct caccatggcc gacatcctgt tgttcgcttt
     2281 tctcgacttc atggccaatg tcggccagcc gctcgatccc gagtgcaaga ctctcaccgc
     2341 ctggttcggc cgcatgaagg cccgaccgag cgccgccgcc tgatccggag acccaagacg
     2401 atgcgccgcc tgactgcttt gttcaccttc atcgcctcgt tcatcctcgc cgccggcctc
     2461 gcccaggccg ccgatccccc caagggcctg ttcctgctga ccgactatcc cgcgcagacg
     2521 gtgcgcgcgg gcgagatcgc gaccatccgg gtcaagctca acaattccgg gctgccgccc
     2581 gaacccgtgg cgctctcgct gtcgggcgta ccggccggct ggaagatcga catcctgggc
     2641 ggcggactgc cgattgccgc ggcgatgccc ggtgtcaacc aggacgtcag cctgcagctc
     2701 cgcgtcgatg tgcccaagga cgcccaggcc ggttcacaaa agatcgtgct gagcgccaag
     2761 gggacgcagt cggccgagct gccgctgacg ctcaccgtcg gcagcgagac gccagccaag
     2821 ctcagcctga aatcgcgcct gccgtcgctg cgcggcacgc cgcgctcgtc gttcgaatat
     2881 accgtgacgg tcggcaacga cagcggcaag gacctcaccg tggcgctgtc ggcgcaggca
     2941 ccggccaact tccagaccac cttcaccgag ggctacggct cgaacgagat cagctcgatc
     3001 ccgatcgagg ccggtcagac caaggacatc aaggtcaagg tgacgccgcc gcgcgacgtc
     3061 aaggcgggcg actatccggt gctgatcaag gcggcatccg agggcgcgac cgccgatatc
     3121 agggtcactt tgcagatcag cggccagggc aagctcgcgc tctcgaccaa ggacggccga
     3181 ctgagcggcg aggcgacggc cggcaagccg tccgacttcg tcctggtggt cagcaacgac
     3241 ggtaccgcgc cgatcgaaga ggtcgagttg tcgggcaccg tgcccacggg atggaaggcg
     3301 gaattcaatc ccaagaccat ccccagcgtg gcgcccaacg agaaaaagga aatccaggtc
     3361 caggtgacgc cgtcggacaa ggcgatcgcc ggcgactatg tcgcctcgtt ccgggccaac
     3421 ggccgcggcg aatcggcgtc ggccgatttc cgcatcaccg tcacgacgtc gacgatgtgg
     3481 ggcattgtcg gcatcgccat catcgccatt gcgctgttgg tcctgctcgg cgccgtggcg
     3541 cgcttcggcc ggcgataggc agccgatggc cgacaacgtc atcgaggcgc gcgggctttc
     3601 gaagctctac ggcacccagc gtgccgtcga cgccatcgac ctcgacatcc gccgcggcga
     3661 gatcttcggg cttctgggac ccaatggcgc gggcaagacc acggccatcc tgatgatgct
     3721 ggggctgacc gacatcagcg gcggctcggt cgaggtgctg ggctataacc cggtgcgcga
     3781 accgctcgag gtcaagcgca gggtcggcta cctgcccgat tcggtcggct tctacgacca
     3841 cctgacggcg cgcgagaacc tcgtctacac ggcgcgcctg ctcggcattc cgcgctcgca
     3901 gaccggccgg cgcatcatgg aggcgatgga gagcgtgcag ctcgccgaag tgatcgacaa
     3961 gcgcgtcgcc acctactcgc gcggcatgcg ccagcggctg ggcatcgccg agatcgtcat
     4021 gaagaaggcc gaggtcgcca tcctcgacga gccgacctcc ggcctcgacc cgcacgccac
     4081 cgtcgagctc ctggagatga tccgcggctt gaagcggatg ggtgtcgccg tgttgctgtc
     4141 ctcgcatctg ctcgaccgcg tgcagagcgt ttgcgatcgc gtggcgctgt tcaacaaggg
     4201 ccggatcgcg ctgatgggca ccgtggtcga gctcgccaac aaggtcctgg gggcgggaca
     4261 tccgctgctg gtcgaggcct cgggcacgga cgtggtagcc gcgctgcgtg gcatcgaggg
     4321 cgtgcagagg gtgatgccgg acggcgaacg ggcctggcgg gtcttcgccg accgcgacgt
     4381 gcgcgccgcg gcagcccagc gcatcgtgtc gtcaggcgga tcgctgaccc ggctcgccga
     4441 cctgcagccc agcctcgagg aggtctatac gcgctacttc caggacgtgc gccatgccgc
     4501 gtaaggtgag gccgcgtagc gccgtgcgtg tgggctcgcc cttcaccggc ctggcgccgg
     4561 tgttcatgaa ggaattggcc gatcacctca gcagcatccg catgatggtg ctgaccctgt
     4621 tcgtgatcgt gttcggcgcc tttccggtcg cctcctcgct gcagcagctg aagtcggccg
     4681 cgtcggcggt gtcgaccctc ggcccctccg aagtcttcct gttcctgcgc atcttcacca
     4741 tcgagccgga gcaggtgcag atcccgttct tcgccgcgct gaatttcatc attccgctga
     4801 tggcgatcgg cctgggcttc gattcggtga acagcgagtt caatcgccga acgctgagcc
     4861 gcgtgctgtc gcagccgatc tatcgcgacg ccctgctgct ggggaagttc ctgggcggac
     4921 tgacgacatt ggcggtggcg ctggtggcgc tgtggctgat cgtgctcggc tcgggtctgg
     4981 tgctgctcgg cataccgccg accggctccg aagtggcgcg tgccctgggt ttcctggtcg
     5041 tggccatcgc ctatggcggc gtctggctcg cggtggcgat gctgttctcg gtgattttcc
     5101 gctcgacggc
//
LOCUS       DASWGA010000279         2211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1041888, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000279 DASWGA010000000
VERSION     DASWGA010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1041888"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..954
                     /locus_tag="VF991_06755"
     CDS             <1..954
                     /locus_tag="VF991_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HEX9556177.1"
                     /translation="KVHASDATNASRSLLLDIHNGTWDSDLLKLFAVPRALLPTVVDC
                     SGELGIATTDILGASVPVLGMAGDQQAATVGQACIRPGMVKATYGTGCFALLNTGSIA
                     VRSHNRLLTTIAYQLAGRRTYALEGSIFIAGAAVQWLRDGLHLIAKSADVEAVARDAK
                     AGHGVYMVPAFVGLGAPYWDAGARGALLGLTRDSGPAEIAAATLDSVCYQTRDLVDAM
                     RGDGAQIDELRVDGGMVVNDSLMQRLADTVGTPVERPKVTETTALGAAFLAGLQAGLW
                     PSLDALSVSWALDRAFQPAEDAASRDRRYAGWQDAVRRVRS"
     gene            1010..1756
                     /gene="pyrF"
                     /locus_tag="VF991_06760"
     CDS             1010..1756
                     /gene="pyrF"
                     /locus_tag="VF991_06760"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEX9556178.1"
                     /translation="MTSRFNPVYCAVDTVDLPEAARLIRSVAGGARPAVGGIKLGLEF
                     FLAHGAPGVRYAFPAPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELEPTFITIHTAG
                     GPAMMRRAAETAAEEARRLGVARPRLLGVTVLTSLDRDDLEATGVKADPSEQVLRLAA
                     LARESGLDGVICSPLEIAALRKACGRDFVLMVPGIRPAGTASGDQKRVMTPGEAVRLG
                     ANHLVIGRPITEAADPASAADAIARDLEVR"
     gene            1762..>2211
                     /locus_tag="VF991_06765"
     CDS             1762..>2211
                     /locus_tag="VF991_06765"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEX9556179.1"
                     /translation="MVEVKICGLSTPETIDAAVRFGARWVGFVTYPHSPRHVAANDLL
                     KALGARVPTSVGRVGLFVDPDDALLDERLATGAIDMLQLQGAETPERVAAIKARTGKP
                     VMKAITVAQASDVERGIAAYASVADRLMFDAADGILPGGNARAFDWTI"
BASE COUNT          309 a          800 c          764 g          338 t
ORIGIN      
        1 aaggtgcatg cgagcgacgc caccaatgcc agccgcagcc tgctgctcga catccacaac
       61 gggacgtggg actccgatct cctgaaactg ttcgccgtgc cgcgcgcctt gctgccgacg
      121 gtggtcgatt gctcgggcga gctcggcatc gccacgaccg acatccttgg cgcgtcggtg
      181 ccggtgctgg gcatggcggg cgatcagcag gccgcgaccg tcggccaggc ctgcatcagg
      241 ccgggcatgg tgaaagcgac ctacggcacg ggctgcttcg cgttgctcaa caccggcagc
      301 atcgccgtgc gctcgcacaa tcgcctgctc accaccatcg cctatcagct cgccggccgg
      361 cgcacctatg ccctcgaagg cagcattttc atcgccggtg ctgctgtgca gtggctgcgc
      421 gacggtctgc atctcatcgc caagtcggcc gatgtcgagg cggtcgcccg cgacgccaag
      481 gcgggccacg gcgtctacat ggtgccggcc ttcgtcggtc tcggcgcgcc ctactgggat
      541 gccggcgcac gtggcgcctt gttgggactc acccgcgata gcgggccggc cgagatcgcc
      601 gccgccaccc tcgattcggt ctgctaccag acacgcgacc tcgtcgacgc catgcgcggc
      661 gatggcgcgc agatcgacga gctcagggtc gacggcggca tggtggtgaa cgattccctg
      721 atgcagcgcc tggccgacac ggtcggcacg ccggtcgagc ggcccaaagt gaccgagacc
      781 acggcgttgg gtgctgcttt cctggccggc ctgcaggccg gcctgtggcc atcgctcgac
      841 gcgctgtcgg tgagctgggc gctcgatcgc gcctttcagc cggccgagga cgccgcctcg
      901 cgcgaccgcc gctatgccgg ctggcaggac gcggtgcgcc gggttcggag ttgagggcgc
      961 gcagttcctg attgctgcct acgaatgcgg ccattaggtt gcgcccgcca tgaccagccg
     1021 cttcaatccc gtctactgcg ccgtcgacac ggtcgacctt cccgaagccg cccgcctgat
     1081 ccgctcggtg gccggcggcg cccggccggc ggtcggcggc atcaagctcg gcctggaatt
     1141 cttcctggcg cacggtgcgc ccggcgtgcg ctacgccttt cccgcgccgg tgcgggcgac
     1201 gggggtgggc ttcttcctcg acctcaagct gcacgacatt cccaacaccg tagcgggcgg
     1261 catccgcgcc gtggtcgagc tcgagccgac cttcatcacc atccacaccg cgggcgggcc
     1321 ggccatgatg cgccgcgccg ccgagaccgc ggccgaagag gccaggcgcc tgggcgtcgc
     1381 ccgaccgcgc ctgctcggcg tcaccgtcct gacctcgctc gatcgcgacg atctcgaagc
     1441 caccggcgtc aaggccgatc cgtccgagca ggtgctgcgg ctggccgcgc tggcgcgcga
     1501 aagcggcctc gacggcgtca tctgctcgcc gctcgagatc gcggccttgc gcaaggcgtg
     1561 cggacgggac ttcgtgctga tggtgccggg cattcgcccc gccgggacgg cgagcggcga
     1621 ccagaagcgg gtcatgactc cgggcgaggc ggtgcggctt ggcgccaatc atctggtgat
     1681 cggccggccg atcaccgagg cggccgatcc cgcgtccgcc gccgacgcga tcgcccgcga
     1741 cctggaagtg cgctgaaaac catggtcgag gtcaagatct gcgggctgtc gacgccggag
     1801 acgatcgacg ccgccgtgcg cttcggcgcg cgctgggtgg gcttcgtcac ctatccgcac
     1861 tcgccgcgcc acgtcgccgc caacgacctg ctgaaggcgc tgggcgcgcg cgtgccgaca
     1921 agcgtcggcc gggtcggcct gttcgtcgat cccgacgacg ccttgctcga cgaacggctg
     1981 gcgaccggcg ccatcgacat gctgcagctc caaggcgcgg agacgcccga gcgcgttgcc
     2041 gccatcaagg cgcgcacggg aaagcccgtc atgaaggcga tcacggtcgc ccaagcgagc
     2101 gacgtcgagc gcggcatcgc agcctacgcc tccgtcgccg accggctgat gttcgatgcg
     2161 gccgacggca tcttgcccgg cggcaatgcg cgggccttcg actggacgat c
//
LOCUS       DASWGA010000280         3839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1932113, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000280 DASWGA010000000
VERSION     DASWGA010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3839
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1932113"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..850)
                     /locus_tag="VF991_06770"
     CDS             complement(<1..850)
                     /locus_tag="VF991_06770"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556180.1"
                     /translation="MHDREFKRSRVNRSLKRREFVKGAAALGAGAMALPWQAAWAEGV
                     PNEFDGSKFQLKAPEPNAKSGGVLKYGITMRPPHFDFHQSGTINSLGSQGCMFDNLIR
                     RDPRDSGKTIIPDLAHSWEIAKDGKTYTFHLRKDVQFHDGAELTSEDVKATFDRIAKP
                     PQGISMPRSTLFAAVSEIAAPDKYTVQFKLSAPRPADFIMGAIASGWNGIVRKKTLED
                     NQYNLRRVVDIPGTGPFKSKRRVENEVWVMEKNPTYWNKGLPYLDGIEFYHALPFSPE
                     LGSAILS"
     gene            1009..2013
                     /locus_tag="VF991_06775"
     CDS             1009..2013
                     /locus_tag="VF991_06775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556181.1"
                     /translation="MPAPTILQIDDLQTHFFTAIGTVRAVDGVSYSLKSGETLGVVGE
                     SGCGKSVTALSILRLVANPPGRIVGGAVRFEGRNLLELSESEMERIRGNDISMIFQEP
                     MTSLNPLFTVGWQISEAIALHQGLSKRDAWDKAVEMLRRVQMPEAERRAHAYPHQLSG
                     GMRQRVMIAMALSCNPKVLIADEPTTALDVTIQAQILDLMRDLQETLGTAIILITHDM
                     GVVAENADRVVVMYAGRKVEEAAAAELFDNPGHPYTKGLLGSIPHLDAAAHSRRARLN
                     EIKGMVPSLFNLPAGCSFAARCSLATDECRATAPPLEQHRPAHWVACWHADQLLRGTA
                     "
     gene            2010..3026
                     /locus_tag="VF991_06780"
     CDS             2010..3026
                     /locus_tag="VF991_06780"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HEX9556182.1"
                     /translation="MNAGPTRERLLEVTNLKKHFPIHKGVFSRVSGQVYAVDGVSFEI
                     GRGETLGLVGESGCGKSTVGRTLLKLVEPTDGTIRVSGEDITHLGAQAMLPYRRRMQM
                     IYQDPYASLNPRMTAGEIVGEPLIIHDVGMLQERREKVAALFERVGLRPETMLSYPHE
                     FSGGQRQRIGIARALALNPDLIVGDEPVSALDVSIQAQIINLLMDLQDELKLSYLFVA
                     HDFAVVEHISHRVAVMYLGRIVEMTDKQSLFEMPLHPYTEALLSAVPIPKASARRRNR
                     VILKGDVPSPINPPSGCHFHARCPYAMPRCRIDVPTLREVKPGHWASCHLHDGGVKFP
                     LASA"
     gene            complement(3055..3483)
                     /locus_tag="VF991_06785"
     CDS             complement(3055..3483)
                     /locus_tag="VF991_06785"
                     /inference="COORDINATES: protein motif:HMM:NF016370.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEX9556183.1"
                     /translation="MFLSPLGERLGEGVVARDDYDANRARDLRRDGSRAECKGWELLR
                     DRRISGAKFRRQYPIGPYFADFACISLKLVIEVDGDHHAFQVEADARRTAAIEREGWR
                     VVRFWANEVVQNPEGIWAEIEQVLSDVPAHLTSPPRGRGI"
     gene            complement(3530..>3839)
                     /locus_tag="VF991_06790"
     CDS             complement(3530..>3839)
                     /locus_tag="VF991_06790"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9556184.1"
                     /translation="SALRIMTLHVLPQCVAPYLVLATTHLGVAIVIEASLGFLGVGIP
                     PPMPTWGNMLSDALNAGLVPPWWLVLFPGVAITLTVLAFNLLGDGIRDLLDPRLRGSV
                     "
BASE COUNT          660 a         1286 c         1234 g          659 t
ORIGIN      
        1 tggacaggat cgccgagccg agctcgggcg agaacggcaa ggcatgatag aactcgatgc
       61 cgtcgagata gggcaggccc ttgttccaat aagtcgggtt cttctccatc acccagactt
      121 cgttctcgac gcggcgcttg ctcttgaacg ggccggtgcc ggggatgtcg acgacgcggc
      181 gcaggttgta ctggttgtcc tccagcgtct tcttgcgcac gatgccgttc cagccgctgg
      241 cgatcgcgcc catgatgaag tcggccggcc gcggcgccga gagcttgaac tgcacggtgt
      301 acttgtcggg cgcggcgatc tcgctgaccg cggcaaacag ggtgctgcgc ggcatgctga
      361 tgccctgcgg cggcttggcg atacggtcga aggtcgcctt gacgtcctcc gaggtgagct
      421 cggcgccgtc atggaactgc acgtccttgc gcaggtggaa ggtgtaggtc ttgccgtcct
      481 tggcgatctc ccagctatgc gccaggtcgg gaatgatggt cttgccgctg tcgcgcgggt
      541 cgcgccggat caggttgtcg aacatgcagc cctggctgcc caggctgttg atggtgcccg
      601 actgatggaa gtcgaaatgc ggcggccgca tggtgatgcc gtatttcagc acgccgccgg
      661 acttcgcatt gggctccggc gccttgagct ggaacttcga gccgtcgaac tcgttgggca
      721 cgccctcggc ccaggcagcc tgccagggca aggccatcgc gccggcgccg agggcggcgg
      781 cgcccttgac gaactcacgc ctctttagac tgcgatttac gcgagaacgc ttgaactcac
      841 ggtcgtgcat ttgcgtttcc tcccttttgg ccttttcctt ggcgagcact gtatgctctg
      901 atggcaggcc ttcttccccg taggccaaaa ctaacacggc gaaactcagg gagtcattgc
      961 ttgaatcctc gcgatccggg gccgcgcgcc gtcggtgagc cggcggtgat gccggcgccg
     1021 acgattctgc aaatcgacga tctccagacc cacttcttca ccgcgatcgg cacggtgcgc
     1081 gccgtcgacg gcgtgtccta ttccctgaaa agcggcgaga ccctgggcgt ggtgggcgaa
     1141 tcgggctgcg gcaagagcgt gacggcgctc tccatcctgc gcctggtcgc caatccgccc
     1201 ggccgcatcg tcggcggcgc cgtccgcttc gaaggcagga acctgctcga gctcagcgag
     1261 agcgagatgg agcgcatccg cggcaacgac atctcgatga tcttccagga gccgatgacc
     1321 tcgctcaatc cgctgttcac tgtcggctgg cagatcagcg aggcgatcgc gctccatcag
     1381 ggcctgtcga agcgcgacgc ctgggacaag gccgtcgaga tgctgcgccg cgtgcagatg
     1441 ccggaggccg agcggcgggc ccacgcctat ccgcaccagc tctccggcgg catgcgccag
     1501 cgggtcatga tcgccatggc gctgtcgtgc aatcccaagg tgctgatcgc cgacgagccg
     1561 acgacggcgc tcgacgtcac catccaggcg cagatcctcg acctgatgcg cgacctgcag
     1621 gagacgctcg gcaccgccat catcctgatc acccacgaca tgggcgtggt cgccgagaac
     1681 gccgaccgcg tcgtggtgat gtatgccggc cgcaaggtcg aggaggcggc cgccgccgag
     1741 ctgttcgaca atcccggcca tccctatacc aagggccttt taggctcgat cccgcatctc
     1801 gacgccgccg cgcacagccg gcgcgcgcgc ctcaacgaga tcaagggcat ggtgccgtcg
     1861 ctgttcaacc tgccggcggg ctgcagcttc gcagcccgct gcagcctggc gaccgacgag
     1921 tgccgcgcca cggcgccgcc cctggaacag catcgtccgg cgcattgggt cgcctgctgg
     1981 catgccgacc agttgctgcg gggcacggca tgaacgccgg gccgacacgt gaaaggttgc
     2041 tcgaggtcac caacctcaag aagcacttcc cgatccacaa gggcgtgttc agccgcgtct
     2101 ccggccaggt ctacgcggtc gacggcgtgt cgttcgagat cggccgcggc gagaccctgg
     2161 gcctggtcgg cgaaagcggc tgcggcaagt cgacggtggg ccgcacgctg ctcaagcttg
     2221 tcgaaccgac cgacggcacg atccgcgtca gcggcgagga catcacccat ctcggcgccc
     2281 aggcgatgct gccctatcgg cggcgcatgc agatgatcta ccaggatccc tatgcctcgc
     2341 tgaacccgcg catgacggcc ggcgagatcg tcggcgagcc gctgatcatc cacgacgtcg
     2401 gcatgcttca ggagcgtcgc gagaaggtcg ccgccctgtt cgagcgggtc gggctcaggc
     2461 ccgagacgat gctatcctat ccccacgaat tctccggcgg ccagcgccag cgcatcggca
     2521 tcgcgcgcgc gctggcgctc aaccccgacc tgatcgtcgg cgacgagccg gtgtcggcgc
     2581 tcgacgtgtc gatccaggcc cagatcatca acctcttgat ggacctgcag gacgagctga
     2641 aactgtccta cctgttcgtc gcccacgact tcgccgtagt cgagcacatc agccatcgcg
     2701 tggcggtgat gtatctcggg cgcatcgtcg agatgaccga caagcaaagc ctgttcgaga
     2761 tgccgttgca tccctacacc gaggcgctgc tgtcggcggt gccgatcccc aaagcgtcgg
     2821 cgcgccggcg caaccgggtg atcctgaagg gcgacgtgcc gagcccgatc aacccgccat
     2881 cgggctgcca cttccatgcc cgctgcccct acgccatgcc gcgctgccgg atcgacgtgc
     2941 caaccctgcg cgaggtcaag ccggggcact gggcgtcgtg tcacctgcac gacggcggcg
     3001 tgaaattccc cttggcgagc gcctaacctt tcatgttcac atttatattc atattcatat
     3061 tcctctcccc cttgggggag aggttaggtg agcgggaacg tcgctgagca cctgctcgat
     3121 ctctgcccaa atgccctcag gattttgaac gacctcgttc gcccagaagc gcaccacgcg
     3181 ccaaccttcg cgctctatcg ccgctgtccg gcgcgcatcc gcctcgactt ggaaagcatg
     3241 gtgatcgcca tcgacctcga tcaccagctt cagcgatatg caggcaaagt cggcgaagta
     3301 ggggccgatg gggtactgtc ggcggaactt cgccccgctg atgcggcgat ctcgcaggag
     3361 ctcccagccc ttgcactcgg cgcggctgcc gtcgcgacgc aggtcgcgtg ctcgattagc
     3421 gtcgtaatcg tctcgggcca caaccccctc acctagcctc tcccccaagg gggagaggaa
     3481 catgaaggaa tttaaagaga ggattgcggc aactacgcgg tcggggcagc taaaccgacc
     3541 ctctcaaccg cggatccagc aagtcgcgga tgccgtcgcc caacaggttg aaggccagca
     3601 ccgtgagggt gatcgccacg cccgggaaca gcaccagcca ccacggcggc accaggccgg
     3661 cgttcagcgc atcggacagc atgttgcccc aggtcggcat cggcggcggg atgccgacgc
     3721 ccaaaaagcc gagcgacgcc tcgatgacga tggcgacgcc gagatgcgtc gtcgccagca
     3781 ccaggtaggg cgcgacgcat tggggcagca cgtgcagggt catgatgcgc agggccgag
//
LOCUS       DASWGA010000281         7860 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1932127, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000281 DASWGA010000000
VERSION     DASWGA010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7860
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1932127"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VF991_06795"
     CDS             complement(<1..325)
                     /locus_tag="VF991_06795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556185.1"
                     /translation="MRRLPWSDFVRNHPRAHLVVAFLPETGEIGTPQARAKRDVLIST
                     IRQLVPLAVYATTIVRASGQAEIHCAFADEAAAAVLAATMKAKVVGRYTGYASQRRFR
                     FDDAAA"
     gene            complement(343..690)
                     /locus_tag="VF991_06800"
     CDS             complement(343..690)
                     /locus_tag="VF991_06800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556186.1"
                     /translation="METILDIFTTLNCAIDAGAMTQEALTVALAAIVSRAHEELERGA
                     LPLDRNRDWPEKRRDLPALESLLCRPDPTLDRIGSANCQACRATRPASRALTLEEHSP
                     RGRFVERLLAIAR"
     gene            839..1636
                     /locus_tag="VF991_06805"
     CDS             839..1636
                     /locus_tag="VF991_06805"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9556187.1"
                     /translation="MAARSDQEAASSSPEPDLRACAKDTDVVRVLLVEDDELCREAVA
                     AALSEHGFAVQGFADGAALLGALEAAAGADVIVLDWSLPQTSGIDLLSELRRRGVDVP
                     VVFLTGWSLTTYESLAFERGAVDFIDKTRGVEVLVRRLRLAVKAARPAAEPLSDKRMV
                     CGKLVLRPSVSRAYWNELDVGLTVGEYNLVHLLASNVGRYVTYRAIYDRLRYEGFAAG
                     NGPDGYRMNVRSTIKRIRNKFRERDPDFDEIENYTGFGYRWGKPETD"
     gene            2192..2425
                     /locus_tag="VF991_06810"
     CDS             2192..2425
                     /locus_tag="VF991_06810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556188.1"
                     /translation="MERGLRAPLSPNEEVALRRIATGVAQPSGREIERLKQLGLVESA
                     DEALCLSETGRERYARLPDAAPPQDAASADRLA"
     gene            complement(2442..3185)
                     /locus_tag="VF991_06815"
     CDS             complement(2442..3185)
                     /locus_tag="VF991_06815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX9556189.1"
                     /translation="MNSPDIGSRNRLLAVLSAADRALLEPSAEMVNLEARQVLEAPND
                     PIQHIYFVESGLVSIVANTQPNHRIEVAMVGYEGMTGLGIVLGDDRSANATLVQSAGS
                     ALRIPSQSLRKVMGESRSLSATLLRYVHVSMVQGSQTALANGRGKLGERLARWLLMWH
                     DRIWHDDLVITHEFLALLLGVRRPGVTDALHELEGKGLIRSSRNLIRILDRNGLHRAA
                     NGFYGIPEAKYDRLIGLDAGRPGIGGPRR"
     gene            complement(3366..4073)
                     /locus_tag="VF991_06820"
     CDS             complement(3366..4073)
                     /locus_tag="VF991_06820"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX9556190.1"
                     /translation="MTEYSNVEPPSVCPLDLVTESNHRIASNLSTLVTILQKQVAAMR
                     TGPELIPRQEVVDELSETIGKILAVSGLHRTLTAQPAPGELDLNNVLTEILQAFKTSG
                     IFGDRLHIGSSVGTGCLVESSQAAMLALAFSEIVTNAMKYAHPTGLPVELSITSAPTP
                     DGGVVLQIADDGIGLPEGFVESRDAGIGLKLVRSLVENAGGRLETKSDELGLTFSIEL
                     SPKAGQPRCGLISGGGD"
     gene            4290..4520
                     /locus_tag="VF991_06825"
     CDS             4290..4520
                     /locus_tag="VF991_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556191.1"
                     /translation="MAEITRGERLQIMLTRKELEALDTWRFATRMPSRASAIRELLKR
                     GLSAEGFALADGELKSRDFGVAGAAGGNSRTK"
     gene            4679..5101
                     /locus_tag="VF991_06830"
     CDS             4679..5101
                     /locus_tag="VF991_06830"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9556192.1"
                     /translation="MLEGLRILVAEDDFLLAEVVVTALDKAGCEVIGPAPRLAKAIEL
                     AERSDLDVALLDINLNGETCYPAAWRLLERKVPFAFMTAYSPSYVPQALGFVAVLAKP
                     FDEGELLAMVEKLTRREVSAALADVKQLSSGKPANWHI"
     gene            complement(5465..7546)
                     /gene="recG"
                     /locus_tag="VF991_06835"
     CDS             complement(5465..7546)
                     /gene="recG"
                     /locus_tag="VF991_06835"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEX9556193.1"
                     /translation="MRPQSLTPLFAQVTSLPGIGPRLGKLVEKLAGPLVVDLLWHLPF
                     AVVDRRNAPEIAHAKAGEVATLTVTVDEHLVPRNPRQPYRVWCSDETGRLCLTFFNGR
                     EDYLKKLLPVGEIRVVSGRVELYQGEVQMTHPDHVVPLDQRESILRVEPVYGLTAGLT
                     QRPIQKAIAGAVERAPALTEWQDAAYLARNRWTDWKSSLARAHAPAEADDLSPMHPAR
                     ARLAFDELLASQLAIALVRHHNRTVAGHATQGDGRLRQAALGALPFALTSSQNTAIGE
                     IAADMAKPERMIRLLQGDVGSGKTVVAFLAMLIGVEAGAQAALMAPTELLARQHHATI
                     APLAEAAGVRLALLTGRDSQKQKKQTLQGLADGSIPLVVGTHALVQEEVEFADLALAV
                     VDEQHRFGVHQRMALSSKGHAVDLLVMTATPIPRTLMLAAYGDLDVSKLTEKPAGRQP
                     IDTRTIPLERIGEVVDGIGRQIAAGAGVYWVCPLIEESEEVDLANVEERFRLLSARFP
                     GKAGLLHGRLKGAERDATMAAFADGRLAILVATTVIEVGVDVPAATVMVVEHAERFGL
                     AQLHQLRGRVGRGAKKSTCLLLYVQPLGETAKARLAIMRETEDGFRIAEEDLRLRGAG
                     ELLGTRQSGLPDMRLADLAAHAELLQAARDDARLVIERDPDLQSDRGAALRALLYLFR
                     RDAAVRTLRAG"
     gene            7632..>7860
                     /locus_tag="VF991_06840"
     CDS             7632..>7860
                     /locus_tag="VF991_06840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008123080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEX9556194.1"
                     /translation="MPRATGEADLETRRKRLLYRSVYRGNKENDILLGQFARAHIASF
                     GSAELDQYERLLAAGDNDIYDWVTGQADIPPE"
BASE COUNT         1338 a         2523 c         2620 g         1379 t
ORIGIN      
        1 aggcggccgc atcatcgaag cgaaaacggc gctggctggc gtagccggtg tatcgcccga
       61 cgaccttcgc cttcatggtt gcggccaaga cggcggcggc ggcttcgtcg gcgaacgcgc
      121 aatggatttc cgcttggccg cttgcccgca cgatggtggt ggcatagacg gccaagggga
      181 ccagttgccg gatcgtgctg atcagaacat cgcgcttcgc ccttgcctgg ggcgtgccga
      241 tctctccggt ctcgggaaga aaggccacga cgaggtgggc gcgcgggtga ttccgtacga
      301 aatcggacca aggcagtctg cgcattgcac agcgtccatc cgctatcgag cgatggcaag
      361 gagcctttca acaaagcggc cccgtggcga gtgttcctcc agtgtcaaag cgcggctggc
      421 tggccgagtt gccctgcagg cttggcaatt tgctgaacct atccgatcca aggttggatc
      481 tgggcggcac aataggcttt ccagtgctgg taagtccctc cgcttctctg gccagtctct
      541 gttccggtcg agcgggaggg ctccgcgctc cagttcctca tgcgcccggc tgacgatggc
      601 ggccagcgcg accgtcagcg cctcctgcgt catggcgccg gcgtcgatgg cgcagttgag
      661 ggtggtgaag atatcgagga tggtttccat gcgctctcca ttgacgcacg ccaagcggtt
      721 ggctggaccg tagcgcgtcg agcgacccga ggtattcgga attgcacgcg cctccacgac
      781 ctcgctggtt tcacgcggcc tccggctgcg ctatcaagca gggaaggggg agctccacat
      841 ggccgcccgt tctgaccaag aggccgcaag ctcgtcgccc gaaccggacc ttcgtgcttg
      901 cgccaaggac accgacgtcg tccgcgttct tctcgtcgaa gacgacgagc tctgccgcga
      961 ggcggtcgcc gccgcgttgt cggagcacgg atttgccgtg cagggctttg ccgatggcgc
     1021 ggcgctgctc ggcgcgctcg aggccgccgc cggtgccgac gtcatcgtcc tcgattggag
     1081 cctgccgcag acctcgggca tcgacctgtt gtccgaactg cgccggcggg gcgtcgacgt
     1141 gccggtcgta ttcctgaccg gctggtcgct cacgacctat gaaagcctgg ccttcgagcg
     1201 cggcgcagtc gacttcatcg acaagacgcg aggtgtcgag gtcctcgtca ggcgcctcag
     1261 gctcgccgtc aaggcagcga gaccggcggc cgaaccgctg tccgacaagc ggatggtctg
     1321 cggcaagctc gttctcaggc cgagcgtcag ccgcgcctat tggaacgagc tggatgtcgg
     1381 cctcaccgtc ggtgagtaca acctcgtcca tctcctggcg tcgaacgtcg gtcgctacgt
     1441 gacctatcgc gcaatctacg accggttgcg ctatgaaggc ttcgccgcag ggaacgggcc
     1501 ggacggctat cggatgaacg tccgatcgac aatcaagcgc atccgcaaca agttccgcga
     1561 acgcgatccc gacttcgacg agatcgagaa ttacaccggc ttcggatatc gctggggaaa
     1621 gcccgaaacg gactgagcgg catgccggaa gccccgcctg gcaaagagcg gatcgtttac
     1681 ttctgcgggc cttccctccc ggcggcacgt tgggccatgg catcgtaggt tcgagcgatc
     1741 cgaagcaacg tctccttggc gccggcgtcg tgcattcctt cggcccttgc gcgcgcttct
     1801 tccgcccgtt cccgccaata gtcagagctc cgcaacccgt cgcttttgct catgtgccgg
     1861 ccccgtccgc acccgtccga caagctcgga cggagttctc cggtattggt cttgccggca
     1921 tagtctccct ccccgctaaa cgtcaacgat ttgtccagga tgccgttggc tgcggcgtgc
     1981 cgctctcttc ggcctcgaga tggggcttgc gtagaagccc cgccccgagc cgcacccatg
     2041 agcggcagac caccattgtg ctcgggacgg ggaccggcgg caggccggcc catggaaaac
     2101 gccggtatcc tgcgaacgtt accgtccgga accggacgat gggttgaagc gggtcgatgc
     2161 ggttcccaag atatcgccaa agggggatcg catggaacgt ggactgcgag cgccactcag
     2221 cccgaacgaa gaagtggccc tgcgccggat cgccaccggc gtcgcgcagc cgtcgggccg
     2281 ggaaattgaa cgactgaagc agctcggtct ggtcgagagc gccgacgagg cgttatgcct
     2341 ctccgagacc ggccgggaac gctatgcgcg tctgcccgac gccgcgccgc cgcaagacgc
     2401 cgcttcggcc gaccggctgg cctgacaact cgtcggcctc ctcaccgccg tgggccgccg
     2461 atacccggcc tgccggcgtc caggccgatc aagcgatcgt acttggcttc cgggatgcca
     2521 tagaagccgt tggccgcgcg gtgtaggccg ttgcggtcga gaatgcggat cagattgcgg
     2581 ctggagcgga tcaagccctt gccttcgagc tcgtgcaggg cgtcggtgac gccgggccgg
     2641 cgcacgccga gcaacagggc gaggaactcg tgggtgatga ccaggtcatc gtgccagatg
     2701 cgatcgtgcc acatcagcag ccatcgggcg aggcgctcgc cgagcttgcc gcggccgttg
     2761 gccagcgccg tctggctgcc ctgcaccatg gagacgtgga catagcgcag cagcgtggcg
     2821 ctcaggctgc ggctttcgcc catgaccttg cgcagtgact ggctggggat gcgcagcgcc
     2881 gatcctgccg actgcaccag ggtcgcgttg gccgagcggt cgtcgcccag cacgatgccc
     2941 aggccggtca tgccttcata gcccaccatg gcgacttcga tgcgatggtt gggttgggtg
     3001 ttggcgacaa tcgagaccag gccgctttcg acgaaataga tgtgctgtat cggatcgttg
     3061 ggcgcttcga ggacctggcg cgcctcgagg ttcaccattt cggcggaggg ttccagcagg
     3121 gcgcggtcgg ccgccgagag caccgccaaa aggcggttgc gcgagccgat gtccggcgaa
     3181 ttcacagcgt ccctccacct ctccggcaag agcacccggg ctccggccag caatcgcgag
     3241 ctcggaacga gctccagcgg gcggtctgcg gaaatccacc atcggcgaga cagcgcagcg
     3301 ctgtcggctc aagaccgagg gtgatcccgt tcacagcgtc acgttggtcg acggtgcagc
     3361 cattttcagt cgccgcctcc tgaaatcaag ccgcacctgg gttggcccgc cttcggcgaa
     3421 agctcgatgg agaaggtgag gcccagctcg tccgatttgg tttcgaggcg gccgcccgca
     3481 ttttccacga gcgaccgcac cagcttcaag ccgatgcctg cgtcgcgcga ttcgacaaaa
     3541 ccttctggca agccgatgcc gtcatcggcg atctgcagca ccacgccgcc gtcgggcgtc
     3601 ggcgcactgg tgatactgag ctcgacgggc agcccggtag gatgcgcgta tttcatcgca
     3661 ttcgtcacaa tctccgaaaa agcgagcgcc agcatcgcgg cctgcgacga ctccaccagg
     3721 caaccggtgc cgacgctcga gccgatgtgc aatcgatcgc cgaaaatgcc ggatgttttg
     3781 aatgcctgca ggatttccgt cagcacattg ttgagatcga gctcgcccgg cgcgggctgg
     3841 gcggtgagcg tgcgatgcag gcctgacacc gcgaggatct tgccgatcgt ttccgatagt
     3901 tcgtccacca cctcctggcg agggatcaac tcaggtcctg tccgcatcgc ggcgacctgc
     3961 ttctgaagga tcgtcacaag cgtgcttagg ttactcgcga tgcgatgatt ggactcggtg
     4021 accagatcga gcggacaaac cgaaggaggc tctacattgg aatattccgt cattgcaggt
     4081 ccccctctgg gttggacgat gatacccagg tgatctaatt atccagctat atcaaggtgt
     4141 tatagactta taagggggat tggacatcga agacgctgca atgcgctttt ccattttctt
     4201 agtctgttcc acctcttgcg caattagcta ggtttatgcc taatgagtaa gtcaattccc
     4261 ggcgttgcat gcgaacaaga gggtttccga tggcagagat cacgcgcggc gagcgtctgc
     4321 agatcatgct gacgcgcaag gagttggaag ctctggacac ctggcgcttc gcaacccgca
     4381 tgccgagccg ggcttcggcc atccgcgagc tgctcaagcg cgggctgtcc gcggaaggat
     4441 ttgccctggc ggacggcgag ctcaagtcac gcgatttcgg cgttgccgga gcggccggcg
     4501 gcaacagccg cacaaagtga ttgttgcttc tgagcgggac gtcggccgcc ctctccatca
     4561 accgatggtg caaaggccgg cgcaaaacag cgcctaatcg tagtgacgag cgactggatg
     4621 gtggccgcaa cgacggcgcg tgcccggcgt tgtcgtacca cgagcgcagg gagcaacaat
     4681 gctggaaggg ttgcgcatcc tggtcgcaga agacgatttc ctgctggcgg aagtcgtcgt
     4741 cacggccctg gataaggcag gctgcgaggt gatagggccg gcgccgcgcc ttgccaaagc
     4801 catcgagctg gcggagcgaa gcgacctcga cgtcgcgctg ctggatatca atctcaatgg
     4861 tgaaacctgc tatccggccg cgtggcggtt gctcgaacga aaagtgccgt tcgccttcat
     4921 gacggcctat tccccgtcgt acgtaccgca ggcgctgggc ttcgtcgccg tgctggccaa
     4981 gccgtttgac gagggcgagc ttcttgccat ggttgaaaaa ttgacgcggc gagaagtttc
     5041 cgcggccctc gccgacgtga agcagttgtc gtcgggcaag ccggccaact ggcatatctg
     5101 aacgacagct ctacgcctct cctcgtcgtt ccccaacgcc ttggcgtgcg ccttccgtcg
     5161 gccaggttca ggtgggaacc gatttacagc agccgacgtt gacgggccgg tcgcgtcgaa
     5221 gttttactcc atagtgatgc ttgactcact gaagatcagc ccgtatggtc gtcacagcca
     5281 tcggaggcat ctcatcccat gcctgtcgag cacgactcac tggaggacga accaaaacga
     5341 ccggcgaaaa tgccggaaat gccgataatt ttcttgcgcc gttcagccac ttggccctca
     5401 aaagcgttag cggaaattgc gggaaatgcg gaaattgccc caaccctcgc cacgggaccc
     5461 ggtttcaacc cgccctcaag gtcctcacgg cagcgtcgcg cctgaacaga tagagcaagg
     5521 cgcgcaacgc cgcgccgcgg tcggattgca ggtcggggtc gcgctcgatc accaggcggg
     5581 cgtcgtcgcg cgcggcctgc agcaactcgg catgggccgc gagatcggcc aggcgcatgt
     5641 ccggcaagcc gctctggcgg gtgcccagaa gctcgccggc gccgcgcagg cggagatcct
     5701 cctcggcgat gcgaaacccg tcctcggtct cgcgcatgat ggcgagcctg gccttggcgg
     5761 tctcgccgag cggctggaca tagagcaaga ggcaggtcga ctttttggcg ccgcggccga
     5821 cccggccgcg cagctggtga agctgcgcca gcccgaagcg ctcggcatgc tcgaccacca
     5881 tgaccgtggc ggccggcaca tcgacaccga cctcgatcac cgtggtggcg accaggatcg
     5941 ccagtcgtcc gtcggcgaag gccgccatcg tggcgtcgcg ctcggctcct ttcaggcggc
     6001 catgcagcag gcccgccttg ccgggaaagc gtgcgctcaa gagccggaag cgctcctcga
     6061 cattggcgag gtcgacttcc tccgattcct cgatcaacgg acagacccag tagacgccgg
     6121 cgccggccgc gatctggcgg ccgatgccgt cgaccacctc gccgatgcgc tccagcggaa
     6181 tggtgcgcgt gtcgatcggc tggcggcccg ccggcttctc ggtgagcttg gagacgtcga
     6241 ggtcgccgta ggcagccagc atcagcgtgc gcggaatcgg cgtggcggtc atgaccagga
     6301 gatcgacggc atggcccttc gaggacagcg ccatgcgctg atgcacgccg aagcggtgct
     6361 gctcgtcgac cacggcgagc gccaggtcgg cgaactcgac ttcctcctgg accagcgcat
     6421 gcgtgccgac caccagagga atcgagccgt cggcgaggcc ctgcagggtc tgcttcttct
     6481 gcttctggct gtcacgcccg gtgagcaggg cgagccgcac gccggcggct tcggccagag
     6541 gcgcgatggt cgcgtgatgc tggcgggcca ggagctccgt cggcgccata agcgcggcct
     6601 gggcgcccgc ctcgacgccg atcagcatgg cgaggaaggc gacaaccgtc ttgccgctgc
     6661 cgacatcgcc ttgcagcagg cggatcatgc gctcgggctt ggccatgtcg gctgcgatct
     6721 cgccgatcgc ggtgttttgg ctcgacgtca gcgcgaaggg cagggcaccc agcgccgcct
     6781 ggcgcaggcg gccgtcgccc tgggtggcgt ggccggccac ggtgcgattg tggtggcgca
     6841 ccagcgcgat ggcgagctgg ctggcgagca gctcgtcgaa ggcaagccgg gcccgtgcgg
     6901 gatgcatggg cgagaggtcg tcggcttcgg ccggcgcgtg ggcgcgggcg agcgaggatt
     6961 tccagtcggt ccagcggttg cgcgcgagat aggcggcgtc ctgccactcg gtcagagcgg
     7021 gcgcgcgttc gacggcgccg gcgatcgcct tctggatcgg gcgctgggtc aggccggcgg
     7081 tgaggccgta gaccggctcg acccgcagga tcgactcgcg ctggtcgagc ggcacgacgt
     7141 ggtcgggatg cgtcatctgc acctcgcctt ggtagagctc gaccctgccg ctcaccacgc
     7201 gaatctcgcc caccggcaac agcttcttca gatagtcctc gcggccgttg aagaaggtga
     7261 ggcagagccg gccggtctcg tcgctgcacc agacgcggta gggctggcgc ggattgcgcg
     7321 gcaccagatg ctcgtcgacc gtcacggtga gcgtggcgac ctcgcccgcc ttggcatggg
     7381 cgatctcggg ggcgttgcgg cggtcgacca cggcgaaagg caggtgccac agcaaatcga
     7441 cgaccagcgg gccggccagt ttttccacga gcttgcccag ccgcggcccg attccgggca
     7501 gcgaggtcac ttgggcgaac aggggcgtca ggctctgcgg gcgcatggat gctaggcttt
     7561 cgggccgcgt gacttcgcca tcgccgccgc ctatatgcta cgccgctttt tgggccggac
     7621 ctggggaaaa catgccaagg gcgacgggcg aggcggatct cgagacgcgg cgcaagcggt
     7681 tgctctaccg cagcgtctat cgcggcaaca aggagaacga catccttctt ggccaattcg
     7741 cgcgcgcgca tatcgcgtcg ttcggctcgg cggagctcga tcagtacgag cgcctgctcg
     7801 cggccggcga caacgacatc tacgactggg tcaccggcca ggccgacatt ccgcccgagg
//
LOCUS       DASWGA010000282         1633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1554793, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000282 DASWGA010000000
VERSION     DASWGA010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554793"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VF991_06845"
     CDS             <1..184
                     /locus_tag="VF991_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556195.1"
                     /translation="LLTGEYDLSATPELSAELARLTKARHFEVMQGLGHFPMSENPLQ
                     FRRYLLPLLDRIAVDD"
     gene            complement(181..579)
                     /locus_tag="VF991_06850"
     CDS             complement(181..579)
                     /locus_tag="VF991_06850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556196.1"
                     /translation="MRTTLLLSTLLSVIVVGGPAWAQLAPGSIGNGGRMPETMSPGAL
                     PPPAPIVSAPSAPAVAPSASYGARYPNTESYSRDRIESQGYRVERVTPQNDGSWKADA
                     SRDAVPTRPQGVPTKITIFPDGRVLEEHQP"
     gene            complement(703..1026)
                     /locus_tag="VF991_06855"
     CDS             complement(703..1026)
                     /locus_tag="VF991_06855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556197.1"
                     /translation="MNRTLVTLALIAAAGVAHAQMQAPSTPGGRAMDSMPGGTSNPNT
                     GLPKTSSNATAAEAAAKAELEAKGYTGVKSLTRDMAGNWAAKAMRDNIEVAVILEPNG
                     NIREQ"
     gene            1192..1551
                     /locus_tag="VF991_06860"
     CDS             1192..1551
                     /locus_tag="VF991_06860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556198.1"
                     /translation="MPLKSIVMAVVLSGWLIAAVVAFMIVAYTSFFGIAVVGLMIWFV
                     TARMDLEQDGAGAVGVGISPGFIAQQVKTKAEMSHAERAALRGQRSLEALSTRFFRHV
                     GIALTLIGVGGFLYFQL"
BASE COUNT          252 a          523 c          551 g          307 t
ORIGIN      
        1 tctgctgacc ggcgagtacg atctgtcggc gacgccggag ctcagcgccg agttggcgcg
       61 gctcaccaaa gcgcggcatt tcgaggtcat gcaggggctg gggcacttcc cgatgtcgga
      121 aaatccgctg cagttccggc gctatctact gccgctgctc gaccgcattg ccgtcgacga
      181 ctagggctgg tgttcctcga ggacgcgacc gtcggggaag atcgtgatct tggtcggcac
      241 gccctgcggc ctggtcggca cggcatcgcg gctggcgtcg gccttccacg agccgtcgtt
      301 ctgcggcgtg acgcgctcca cgcgatagcc ctgggattcg atgcgatccc tggaatagga
      361 ctcggtgttg ggataacgag cgccatacga ggctgatggc gcgaccgcgg gagccgaagg
      421 agcggagact atgggcgccg gcggcggcaa ggcgccaggt gacatggtct cgggcatgcg
      481 gccgccgttg ccgatcgacc cgggcgccaa ttgcgcccag gcaggtccgc caacgacgat
      541 cacggaaagg agagtagata gcaggagggt ggtgcgcatg ctccggatat ggaagctccg
      601 gatgcgccca caagtccatc cctaagtatg aggggcagcg ctggcgggac gtaaacgagg
      661 agtaaaccat cccgccaggc cgggccgcag agacctttcg gcctactgct ccctgatgtt
      721 gccgttcggt tcgagaatga cggcgacctc gatattgtcg cgcatggcct tggccgccca
      781 gttgccggcc atatcgcgcg tcaggctctt gacgcccgtg tagcccttgg cctcgagctc
      841 ggccttggcc gcggcctccg ccgccgtcgc attggacgag gtcttgggca agccagtgtt
      901 cggattactg gtgccgcccg gcatcgaatc catggcccgg ccgcccggcg tgctgggggc
      961 ctgcatctgg gcatgagcca cgcccgccgc cgcgatcagc gccagggtaa cgagggtgcg
     1021 gttcatcagc gtcctccttc tttgctgtgg gacggagagt gaacgcccac cctcgcttgg
     1081 gtgttgcatg acaaaagcag caccggcgtt gccgaccgcc gtgccgccac tttgttgcca
     1141 aactcgcgtc ccgggttgcc agccgcggcg gaacggacca cgattgccgc catgcccctg
     1201 aagtcgattg tcatggcggt tgttctcagc ggctggctga ttgccgccgt ggtggccttc
     1261 atgatcgtcg cctacacgag cttcttcggc atcgccgtgg tcggcttgat gatctggttc
     1321 gtgaccgcgc ggatggatct ggaacaggac ggcgccggag cggtgggcgt cggcatctcg
     1381 ccaggcttca ttgcccagca ggtcaagacc aaggcggaga tgtcgcacgc cgagcgtgcc
     1441 gccctgcgcg gccagcgctc gctggaggcg ctgtcaacgc gcttcttccg ccatgtcggc
     1501 atcgccctga cgctgatcgg cgtcggcggt ttcctgtatt ttcaactata ggctcagcgc
     1561 tacttctggc cgacgcagtt cgaataggtc accgtctggc tcggcccttc ctcgacgaag
     1621 gccccgtcgc cct
//
LOCUS       DASWGA010000283         3963 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1555105, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000283 DASWGA010000000
VERSION     DASWGA010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1555105"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..166
                     /locus_tag="VF991_06865"
     CDS             14..166
                     /locus_tag="VF991_06865"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556199.1"
                     /translation="MAGADFSAADITAVVTVDFATAALKMPIPEGSRALRRWYETVAA
                     RPSARA"
     gene            complement(259..1875)
                     /locus_tag="VF991_06870"
     CDS             complement(259..1875)
                     /locus_tag="VF991_06870"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX9556200.1"
                     /translation="MSSLSGDALGAGPSAAAPKPATARPWLVAPTVGLAAFMEVLDIS
                     IANVALRHIAGDLAATPEESTWVLTSYLVANAIVLPMSGWLASAIGRRKYFLGCIIGF
                     SATSLLCGLAPSLPLLIAARALQGVTGGGLQPNAQAILADAFPLHKRGQAFAVYGIAV
                     VFAPAIGPTLGGWITDNLSWRWVFLLNVPVGILLSILATRVIVEPPDRVAALRTRFKD
                     GIRFDYVGFAFLVVGMCALQVVLDKGQEDDWWSSTFITNLAITAALALAAFVVWELRR
                     PDPIVDLRLFRNRNFAIGNVLMFMVGFVLLSSTVLLPLFVQSLLGYTATEAGLVISPG
                     GFAVMLMMPVVGILVGRTDARWLIAFGLVATSLALFNMMRFDTNVDYATVVWARIYQS
                     IGLAFLFIPVNTIAFLGLPPDKNNDASAIINMMRNLGGSFGIAIATTVLARQQQVHHN
                     VLVGHVTPWSSPYDATIQALQKAFLAGSGNAADALHQAQAQLYAIVQRQAAMLSYIDA
                     FWLLAIIVTALVPLVFLLRKSDSAAAPPAH"
     gene            complement(1877..3004)
                     /locus_tag="VF991_06875"
     CDS             complement(1877..3004)
                     /locus_tag="VF991_06875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX9556201.1"
                     /translation="MSPDQPVVGEQPLKPGGAPPQPVPPQPAPVVARLPRRRRRVLPP
                     LLIALAGLAAIGVGVAWWLDARDYETTDNAFIDAHMVRVAPQVTGRVALVPVDDNQAV
                     VPGQLLVKIDPAPLRAKLDQAEANQANAAGALAQAQAQQAVVVANAHQARAQVGVAEA
                     NATNALAQLKRSETLVAKLAASQQAFDDATAAARRTAAALVAAQRGLEAAEAQFAVTR
                     SQIETAQAGLRSAAAQTEQARLDLSYTEVVASEAGTIAHKNVSPGDYVQIGQNLIALV
                     PLKVWITANFKETQLELMRAGQPVEIRIDAYPGKTFQGHVDSFQRGSGPAFSLLPPEN
                     ATGNYVKVVQRVPVKIVFDDPPDPGRPLGPGMSAVPRVKVR"
     gene            complement(3001..3714)
                     /locus_tag="VF991_06880"
     CDS             complement(3001..3714)
                     /locus_tag="VF991_06880"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9556202.1"
                     /translation="MASTALAIPSTRWRRRKDARPGEIVAAGLACFAERGFAATRLED
                     VARRAGVTKGTLYLYFPNKEELFKAVVRQAVVPNIALGEALVAQSAEPAPVVLEQLVA
                     RLSVAMVAPASAIPKIVVAEAGNFPDIARFYLEEVIQRGLGMFRRLLELGVARGEFRP
                     MDVESTAYCIVAPMVLGMMWRHSFARHEQRPFDAAALCRAQLHVLSLGLVPPGKGGPA
                     KTERAAGVRSRRRRKGADR"
     gene            complement(3724..>3963)
                     /locus_tag="VF991_06885"
     CDS             complement(3724..>3963)
                     /locus_tag="VF991_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556203.1"
                     /translation="GEGDPSSRPEREARSGETFSLRQAARREAKVFPLGTEFTPSEAE
                     GPLDRDDGNREIAQGVRLYRITPPISRLSQLITVW"
BASE COUNT          652 a         1277 c         1421 g          613 t
ORIGIN      
        1 ggacgtgcct ttcgtggccg gagccgactt ctcggccgcc gacatcaccg ccgtcgtgac
       61 cgtcgatttc gcgacggcgg cgttgaagat gccgatccct gaaggctccc gcgccctgcg
      121 tcgctggtac gagacggtgg cggctcggcc cagcgccagg gcgtagagag ctgtcgatca
      181 gccgggccac tggctgtgtc gggcgattcc gctttcttgg aaaccggatt ggctcctgga
      241 cagcctctcc gccccgcctt aatgcgccgg cggggcggcg gcggagtccg actttctcaa
      301 caggaaaacc agcggcacca gcgcggtgac gatgattgcc agaagccaga aggcgtcgat
      361 gtaggacaac atggcagcct gcctctgcac gatggcgtag agctgcgcct gcgcctggtg
      421 gagcgcgtcg gcggcattgc ctgaaccggc gaggaaggcc ttctggagcg cctggatcgt
      481 ggcgtcgtac gggctgctcc acggcgtgac atgtccgacc agcacgttgt ggtggacctg
      541 ctgttggcgc gccagcacgg tcgtggcgat ggcgatgccg aaactgccgc cgagattgcg
      601 catcatgttg atgatggccg aggcatcgtt gttcttgtcg ggcggcaggc cgagaaaggc
      661 gatggtgttg acaggaatga acaggaaggc gagcccgatc gactggtaga tgcgcgccca
      721 gacgacggtg gcgtaatcga cgttggtatc gaaacgcatc atgttgaaca gtgccagcga
      781 cgtggcgacc aggccgaagg cgatgagcca gcgggcgtcc gtccggccga cgagaatgcc
      841 gacgacgggc atcatcagca tgacggcgaa accacccggc gagatcacca gccccgcttc
      901 ggtcgcggtg tagccgagca ggctctgcac gaacagcggc agcagcacgg tgctgctcag
      961 caggacgaag cccaccatga acatcaggac attgccgatg gcgaagttgc ggttcctgaa
     1021 caggcgcaga tcgacgatcg gatcggggcg gcgcagctcc cagacgacga acgcggccag
     1081 cgccagcgcc gcggtgatgg cgagattggt gatgaaggtg gatgaccacc agtcgtcctc
     1141 ctgccccttg tcgagcacga cctgaagcgc gcacatgccg acgaccagga aggcgaagcc
     1201 gacatagtcg aagcggatgc cgtccttgaa gcgtgtcctg agcgcagcca cgcgatccgg
     1261 cggctcgacg atcacccgcg tcgccaggat cgacagcagg atgccgaccg gcacattcag
     1321 caggaagacc cagcgccagg agaggttgtc ggtgatccag ccgcccaggg tgggtccgat
     1381 ggccggcgcg aacacgacgg cgatgccgta gacggcgaaa gcctggccgc gcttgtgcag
     1441 cggaaacgca tccgcgagga tggcctgcgc attgggctgc aggccaccgc cggtgacgcc
     1501 ctgcagggcg cgcgccgcga tgagcagcgg caggctgggc gcgaggccgc acagcagcga
     1561 ggtggcgctg aagccgatga tgcagccgag gaagtatttc cggcggccga tcgcggaggc
     1621 gagccagccg ctcatcggca ggacgatggc gttggcgacc aggtaggagg tgaggaccca
     1681 ggtcgattcc tcgggggtcg ccgcaaggtc tccggcaatg tgccggaggg ccacgttggc
     1741 gatggagatg tcgagcacct ccatgaaggc cgcgagcccg acggtgggcg ccacgagcca
     1801 gggccgcgcc gtggcaggct tcggcgccgc ggccgatggc cccgctccca gtgcgtcgcc
     1861 ggagaggctc gacatgctag cgcaccttca cgcgcggcac cgccgacatg ccgggaccga
     1921 gcggccggcc cgggtcgggc ggatcgtcga acacgatctt gaccggaacg cgctgcacca
     1981 ccttgacgta gttgcccgtg gcgttctccg gcggcagcag gctgaaggca ggcccactgc
     2041 cgcgctggaa gctgtcgaca tggccctgga aggtcttgcc gggataggca tcgatgcgga
     2101 tctcgaccgg ctgtccggcg cgcatgagtt cgagttgcgt ctccttgaaa ttggcggtga
     2161 tccagacttt tagcggcacg agcgcgatga ggttctggcc gatctgcaca tagtcgccgg
     2221 gcgatacgtt cttgtgcgcg atcgtgccgg cctccgaggc gacgacctcg gtataggaga
     2281 ggtcgagccg cgcctgctcg gtctgcgccg ccgcgctcct gaggcccgct tgcgcggtct
     2341 cgatctggct tcgcgtcacg gcgaactgcg cctcggccgc ctcgaggccc ctctgcgccg
     2401 cgaccagggc cgccgcagtc ctcctcgcgg ccgcggtggc gtcgtcgaac gcctgttggg
     2461 aggccgccaa cttggcaacc agggtctcgc tgcgcttgag ctgggccagc gcgttcgtcg
     2521 cattggcttc ggcgacgccg acctgggcac gcgcctggtg cgcgttggcc acgaccaccg
     2581 cctgctgcgc ctgggcctgc gcgagggcac ccgccgcatt cgcctggttt gcctcggcct
     2641 ggtcgagctt ggcccgaagg ggggccgggt cgatcttgac caggagctgg ccgggcacca
     2701 cggcctggtt gtcgtcgacc ggcacgagcg ccacgcgccc cgtcacctga ggcgcgacgc
     2761 gcaccatgtg ggcgtcgatg aaggcattgt cggtcgtttc gtagtcgcgg gcatcgagcc
     2821 accacgccac gccgacgccg atcgccgcga gcccggcgag ggcgatcagc agcggcggca
     2881 ggacccttcg ccggcggcgc ggcagtcgcg cgacgacggg cgccggttgt ggcggcacgg
     2941 gttggggtgg cgcgccgcca ggcttcaggg gctgttcgcc aacgacgggt tgatcgggac
     3001 tcatcgatcc gccccctttc gccggcgtcg cgaccgaacg ccggcggcgc gctcggtttt
     3061 cgcggggccg cctttcccgg gcgggacaag gcccagcgac aggacatgca gctgggcacg
     3121 gcacagcgcg gccgcatcga agggacgttg ttcgtggcgc gcgaaggagt gccgccacat
     3181 catgcccagc accatcggcg cgacgatgca gtaggcggtg ctttcgacat ccatcggacg
     3241 gaattcaccg cgggcgacgc ccagctcgag cagccggcgg aacatgccga ggccgcgctg
     3301 gatgacctcc tcgagataga agcgcgcgat gtcggggaaa ttgccggctt cggcgacgac
     3361 gatcttcggg atcgcgcttg cgggggccac catcgcgacc gacaagcggg cgaccagttg
     3421 ctccagcacc acaggcgccg gctcggcgga ttgagcgacg agcgcttcgc cgagggcgat
     3481 attggggacg acggcctggc gcaccacggc cttgaagagc tcttccttgt tcgggaagta
     3541 gagatagagc gtccctttgg tcacgccggc gcgccgggcg acatcctcga gacgggtcgc
     3601 ggcgaatcca cgctcggcga agcaggcgag acccgccgcg acgatctcgc ctggccgcgc
     3661 gtccttgcgc cgacgccagc gcgtcgaggg gatggcgagt gcggtcgaag ccatgttaat
     3721 aacttaccag acggttatta attgggaaag ccgcgagatc ggcggcgtga tccggtagag
     3781 gcggacgccc tgtgctatct cgcgatttcc gtcgtctcga tcgaggggcc cctcggcttc
     3841 gctcggggta aactccgtcc cgagtgggaa gaccttcgct tcacggcggg ctgcttgtcg
     3901 tagagagaag gtctctccgc tccgcgcttc acgctccggt cgagacgacg gatcgccttc
     3961 ccc
//
LOCUS       DASWGA010000284         4194 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1042619, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000284 DASWGA010000000
VERSION     DASWGA010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4194
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1042619"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /locus_tag="VF991_06890"
     CDS             complement(<1..576)
                     /locus_tag="VF991_06890"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX9556204.1"
                     /translation="MRVGAFYFPTDYGINLAELGRALEDRGFDSLFVPEHTHIPVSRK
                     SPFPGGGELPKRYAHTHDPFVGLAFAAAATRKLLLGTGICLVPQHEPIVTAKAIASLD
                     QLSGGRFIFGIGGGWNVDEMENHGARYETRFKQMREHVLAMKALWTEEKASFHGEFVN
                     FDPVWSWPKPKQRPHPPIILGGESDHTLRRVI"
     gene            complement(592..1575)
                     /gene="gnd"
                     /locus_tag="VF991_06895"
     CDS             complement(592..1575)
                     /gene="gnd"
                     /locus_tag="VF991_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HEX9556205.1"
                     /translation="MKIGVIGLGRMGGNIVRRLMQAGHSCVVYDANPTAGAALTKEGA
                     VAADSVAALVEALGAGPRTVWVMLPSGKITEQTIAQLGDLMRKDDAIIDGGNSNFKDD
                     VRRARQLAPKGIKYLDVGTSGGVWGLARGYCLMIGGDTEVVARLDPIFAALAPGLGTI
                     ERTAGRDKLDPRAERGYIHAGPVGAGHFVKMIHNGIEYGMMQAFAEGFDIMRNRASQK
                     LPADERYDLNLADVAEVWRRGSVVTSWLLDLTASALAKDARLEHFSGNVEDSGEGRWT
                     IEAAIEEAVPADVLAASLFVRFRSRQQHTFAEKVLSAMRLGFGGHVEAPKQ"
     gene            1656..2516
                     /locus_tag="VF991_06900"
     CDS             1656..2516
                     /locus_tag="VF991_06900"
                     /inference="COORDINATES: protein motif:HMM:TIGR03620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03620 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX9556206.1"
                     /translation="MTLGRLGVWYSTDKLHGSQLADLLAVVEKSGYAALWYPESRGYE
                     SMSLAAFLLSKSQRLMIGSSIANIYARDSFTARRAMVSLNDLYDHRFILGLGVSHVPM
                     VEGLRGHHYDKPVPAMRAYLDGVHKDLPKPEEAPVMVAALGPKMLALSAEKSRGAVPY
                     NVTPKHTAKAAAILGPTKWLAVEQKVTLESDPVRARTLGRKELARYMVLPNYRNNWLR
                     DGFTEADLANGGSDRFIDAMVLWGDAATVKKGLRAHFEAGATHVCLQPVHADGDFATR
                     DRMLAALADT"
     gene            2674..3741
                     /locus_tag="VF991_06905"
     CDS             2674..3741
                     /locus_tag="VF991_06905"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9556207.1"
                     /translation="MDFGIALPTAADSWKIVKQAEEQGFSHAWFYDTQMLSADCFVAM
                     GAAAVNTRRIRLGTGVLVPSNRIAPVAANALATLNQLAPGRIDFGVGTGFTARRAMGF
                     GAIKIKDMETYIHQVYGLLHRETVDFEMEGQHRKIRFLNPELPLFNTKDPIALHLSAF
                     GPRTRALTAKLKAGWIDFVGNVETGVREVEAMREAWTKAGHAMGDLQATAFALGCVLG
                     DGEPADSERAMAQAGPRAAVMLHRAADEALSGLKPGTAMPKTKPELEGYIALARTYEP
                     KDAPYLENHRGHLMYVKSEEKRFVTADLIRATSFTASEAEIKQRIDRLRGAGYTQFTI
                     QLVPGQEQALADWARIRRAFG"
BASE COUNT          756 a         1393 c         1328 g          717 t
ORIGIN      
        1 gatcacccgg cgcagcgtgt ggtcgctctc gccgcccaaa atgatcggcg gatgcggccg
       61 ttgcttgggc ttgggccacg accagaccgg atcgaaattc acgaactcgc cgtggaacga
      121 cgccttctcc tcggtccaca gcgccttcat ggccagcaca tgctcgcgca tctgcttgaa
      181 gcgcgtctcg tagcgcgcgc cgtgattctc catctcgtcg acgttccagc cgccgccgat
      241 gccgaagatg aagcgcccgc ccgagagctg gtcgagcgag gcgattgcct tggccgtgac
      301 gatcggctca tgctgcggca ccaggcagat gccggtgccg agcagaagct tcctggtcgc
      361 cgccgccgcg aaggccaggc ccacgaatgg atcgtgggtg tgggcatagc gcttcggcag
      421 ctcgccgcca ccggggaacg gcgacttgcg actgaccggg atgtgggtgt gctcgggcac
      481 gaacagcgaa tcgaagccgc ggtcctcgag cgcgcgcccg agctcggcga ggttaattcc
      541 atagtcggtc gggaaataga aagcacctac acgcatggca atcctcctcg actattgctt
      601 gggagcttcg acatggccac cgaagcccaa ccgcatcgcc gacagcacct tctcggcgaa
      661 ggtatgctgc tggcgcgaac ggaaccgcac gaacagcgag gcggccagca cgtcggccgg
      721 cactgcctcc tcgatcgccg cctcgatggt ccagcggccc tcgccgctat cttcgacatt
      781 gccggagaaa tgttccagcc gggcgtcctt ggcgagcgcg ctggcggtga gatcgagcag
      841 ccacgaggtc accacgctgc cgcgccgcca gacctcggcg acatcggcca ggttgagatc
      901 gtagcgctcg tcggccggca gcttttgcga ggcgcggttg cgcatgatgt cgaaaccttc
      961 agcgaaggcc tgcatcatgc cgtattcgat gccgttatgg atcatcttga cgaaatgacc
     1021 ggcgccgacc ggcccggcat ggatgtagcc gcgctcggcg cgcggatcga gcttgtcgcg
     1081 ccctgccgtg cgctcgattg tgccgagccc gggcgccagg gcggcgaaga tcgggtcgag
     1141 acgggccacg acctcggtat cgccgccgat catcaggcaa tagccgcgcg ccaggcccca
     1201 cacgccgccc gaggtgccga catcgagata tttgatgccc ttgggcgcca attggcgggc
     1261 gcggcggacg tcgtccttga agttgctatt gccgccgtcg atgatcgcgt cgtccttgcg
     1321 catcagatcg ccaagctggg cgatggtttg ctcggtgatt ttgcccgatg gcagcatcac
     1381 ccagacggtg cgcgggccgg cgcccagcgc ctcgaccaag gctgcaacgg agtcggcggc
     1441 gacggcgcct tctttggtga gcgcggcgcc cgctgtcggg ttggcatcgt agacaacgca
     1501 ggaatgcccc gcctgcatga gtcgccgcac gatatttccg cccatccgtc ccaggccgat
     1561 gacgccgatc ttcatgtgct atttcactcc gacgatatcg gttagcttaa cgagacaatg
     1621 ccaaggtcac aacgaagcga cgggaaggaa cagccatgac attaggacgg ctgggcgtat
     1681 ggtactcgac ggacaagctg cacggatcgc aactggccga tcttttggcg gtcgtcgaga
     1741 aatccggcta cgcagcactc tggtatcccg aatcgcgggg ctacgaatcg atgtcgctgg
     1801 ccgcctttct cctgtcgaaa agccagcggc tgatgatcgg cagctcgatc gccaacatat
     1861 atgcccgcga ttcctttacc gcacggcggg ccatggtgtc gctgaacgat ttgtacgacc
     1921 atcgtttcat cctcggcctg ggcgtcagcc acgttcccat ggtggagggc ctgcgcggcc
     1981 atcactacga caagccggtc ccggccatgc gggcctatct ggatggcgtt cacaaggatc
     2041 tgcccaagcc tgaggaggcg ccggtgatgg tggcggccct gggcccaaag atgctggcct
     2101 tgagcgccga gaaatcgcgc ggcgccgtgc cctacaatgt gacgcccaaa cacaccgcga
     2161 aggcggcggc gatcctcgga ccgacgaagt ggctggcggt cgagcagaag gtgacgctcg
     2221 aaagcgatcc ggtccgcgcc cgcacgctcg gccgcaagga gctcgcgcgc tacatggtgc
     2281 tgcccaacta tcgcaacaac tggctgcgcg acggcttcac cgaggccgat ctcgccaacg
     2341 gcggcagcga tcgcttcatc gacgccatgg tgctgtgggg cgatgcggcg acggtcaaga
     2401 agggcctgcg cgcgcacttc gaagccggcg ccacccacgt ctgcctgcag ccggtccacg
     2461 ccgacggcga cttcgcgacg cgcgatcgca tgctggccgc tttggcggac acctgaggtc
     2521 aatgccacct ctcttgtcgt cctgagcgaa gcgaagggcc tcatcaccgc ctgccgagac
     2581 gctaggcatt cgcccgatgc cacggcatga gatccttcgc ttcgcttcag ggcgggggtt
     2641 accccgcccg cgatgacaga taggagaaag gacatggatt tcggcatcgc tctgcccacg
     2701 gcggcggact cgtggaaaat cgtcaagcaa gcggaggaac agggcttcag ccacgcctgg
     2761 ttctacgaca cccagatgtt gagcgccgac tgcttcgtcg ccatgggggc ggccgccgtc
     2821 aacacgcgcc gcattcgcct cggcaccggc gtgctggtgc cgtcgaaccg catcgccccg
     2881 gtcgccgcca atgcgctggc cacgctcaac cagctcgcgc ccgggcgcat cgatttcggc
     2941 gtcggcaccg gcttcacggc gcgccgcgcc atgggcttcg gcgcgatcaa gatcaaggac
     3001 atggagacct atatccatca ggtgtacggc ctgctgcacc gcgagacggt cgacttcgag
     3061 atggaaggcc agcatcgcaa gatccgcttc ctcaatcccg agctgccgct gttcaacacc
     3121 aaggacccga tcgcgctcca tctctcggcc ttcggtccgc gcacgcgggc gctgacggcc
     3181 aagctgaagg cgggttggat cgactttgtc ggcaatgtcg agaccggcgt gcgcgaggtc
     3241 gaggcgatgc gcgaggcgtg gaccaaggcc ggccatgcga tgggcgattt gcaggcgacg
     3301 gcattcgccc tgggctgcgt cctgggggac ggcgagccgg ccgattccga acgggcgatg
     3361 gcgcaggcgg gaccgcgcgc cgccgtgatg ctgcatcgcg ccgccgacga ggcgctgtcc
     3421 ggcctcaagc cgggcaccgc catgccgaag accaagccgg agctcgaggg ctacatcgcg
     3481 ctcgcgcgca cctacgagcc caaggatgcg ccctatctgg agaaccatcg cggccacctg
     3541 atgtatgtca aatcagagga gaagcggttc gtcaccgccg acctgatccg cgcgacgtcg
     3601 ttcacggcga gcgaagccga gatcaagcag cgcatcgaca gattgcgcgg cgccggctac
     3661 acgcagttca ccatccagct cgtgccgggc caggaacagg cgctcgccga ttgggcccgc
     3721 atccggcggg catttggcta aagattgtcc gacggcaccg cccgtgctca gcctgatccc
     3781 tccaaggcga gagatcggtc gagtttccgc agtttccgca agcgctacgg caattggcag
     3841 gggttcagcg cggtcatccg tccattcagc atcctccatc gtttagcccg ccgacggcga
     3901 atttccgcaa ttcccgcaag cgctatcgac atttcccgga cgagacagcc gcaacaacgc
     3961 gcacgcttga tcagcgccga tccgcccgaa actccataag tggaaccgta aggtacactt
     4021 ccatatatgt caagtattat tctgggatat cccaggcttc atggccgaat ttctgcgcac
     4081 catgctacgc agaaactcgc cgtcgggctt ccccccggcg gctagcccgc cggcgcctgt
     4141 tctttctcgt ccatcagacc tctttcgacc tctgaacgta tttggggacg ccat
//
LOCUS       DASWGA010000285         3139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_662811, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000285 DASWGA010000000
VERSION     DASWGA010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_662811"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..312)
                     /locus_tag="VF991_06910"
     CDS             complement(64..312)
                     /locus_tag="VF991_06910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043231 - intracellular membrane-bounded
                     organelle [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HEX9556208.1"
                     /translation="MSDKAVIAGTAPIGIGVEAGKDYWWCACGKSKNQPFCDGSHKGS
                     SFSPVQWMAPESKQVWFCACKQTATQPLCSGAHKALGA"
     gene            complement(402..1328)
                     /locus_tag="VF991_06915"
     CDS             complement(402..1328)
                     /locus_tag="VF991_06915"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEX9556209.1"
                     /translation="MAELPSHMRPERSFQGLILALQRYWADYGCVILQPYDMEVGAGT
                     FHPATTLRALGPNPWNAAYVQPSRRPKDGRYGENPNRLQHYYQFQAILKPSPPDLQDL
                     YLDSLSAIGIDKSLHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVAGFE
                     CAPVSGELTYGLERLACYLQGVDSIMDLNFNGRTDNQKVMYRDVFLQAEQEYSRHNFE
                     FADTDMLFEQFRMAEAACRKYLDAGWDGERRRHLMALPAYDQCIKASHVFNLLDARGV
                     ISVTERQSYILRVRDLARACGEAWLKTAGGSA"
     gene            1491..2468
                     /locus_tag="VF991_06920"
     CDS             1491..2468
                     /locus_tag="VF991_06920"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9556210.1"
                     /translation="MQASSSIALVIVSLAAWLSPAAAQDYPNRPIRMIVAFAAGGTTD
                     FVARLIADKAKGTLGQNIVVENRPGANGAIGADYVAKSEPDGYTLFFSTAGAITINPS
                     LRSDLPYDPVRDFAPVAPIARNTVLFAAGPALKVDAAQDMLALARAKPGAITVAITGV
                     GAISHLAIELLQHAAGIKLQYVPYRGAGQAISDFIGGQVNAMSAEVPVLMPQLKTGKA
                     KVLAVAAQNRSDVLPDVPTFAELGFADVVADNWSGALAPARTPPVVIAKLNAALNAAV
                     HNPETRAKLADNGVSATGGSPEDLIALIAAETARWRKVVKEIGVKVQAE"
     gene            complement(2472..2669)
                     /locus_tag="VF991_06925"
     CDS             complement(2472..2669)
                     /locus_tag="VF991_06925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556211.1"
                     /translation="MLPLPPVIAWTLAAIGAVAVSKVLAREWRRVNAELDARERASQT
                     VARDELPTLRRDPHSGVYRPQ"
     gene            complement(2750..>3139)
                     /locus_tag="VF991_06930"
     CDS             complement(2750..>3139)
                     /locus_tag="VF991_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEX9556212.1"
                     /translation="TENEDDVARLKAIQRDIHSMFIGLVRERRGERLTGPENTVFSGE
                     YWVAKTAKDLGLVDQLGDVRGFLRQRFGEDVVTPPVPAERSLFGRRTPGVAGIATEGL
                     LGIEPRGLVDDLISALEARAIWARFGL"
BASE COUNT          533 a         1021 c         1024 g          561 t
ORIGIN      
        1 ggggaggggt cggggatcgg gccgcgtggc acatccgtgc cacagcagga gagggtgaag
       61 gctttacgcc cccagcgcct tatgcgcgcc gctacagagc ggctgtgtcg cggtctgttt
      121 gcaggcgcag aaccacacct gcttgctctc aggcgccatc cactgcaccg gcgaaaacga
      181 cgaacctttg tgcgagccgt cgcagaacgg ctggttcttc gacttgccgc aggcgcacca
      241 ccagtagtcc ttgccggctt caacaccgat gccgatcggc gcggttccgg caatcacggc
      301 tttgtcactc atggtcgatc cccttatggt cgatttagct cttggtcaga ttctgcactt
      361 gattgctctc gattcccggc tgaaaacaac cagccgcctg ttcacgcgct gccgccggcg
      421 gtcttgagcc aggcttcgcc gcacgccctc gcgagatcgc gcacccgaag gatgtagctc
      481 tgccgctcgg tcaccgatat gacgccgcgg gcatcgagca ggttgaacac gtggctcgcc
      541 ttgatgcact ggtcataggc cggcaacgcc atcaggtggc gcctgcgctc cccgtcccag
      601 ccggcgtcga gatatttgcg gcacgcggcc tccgccatgc ggaattgctc gaacagcatg
      661 tcggtgtcgg cgaattcgaa attgtggcgc gaatattcct gctcggcctg tagaaacacg
      721 tcgcgataca tgactttctg attgtcggtg cggccgttga agttcagatc catgatgctg
      781 tcgacgccct gcaggtaaca ggcaagccgc tccagaccat acgtcaattc gccggatacc
      841 ggcgcgcatt cgaaccctgc gacctgctgg aaataggtga actgcgaaac ctccatgccg
      901 tcgcaccagc attcccagcc gagcccccag gcgccaagcg tcgggctctc ccagtcgtcc
      961 tccacaaagc ggatgtcgtg aagcgacttg tcgatgccga tggcggaaag cgagtcgaga
     1021 taaaggtcct gcagatcagg cggcgatggc ttgaggattg cctggaactg gtaatagtgt
     1081 tgcagccggt tggggttctc gccgtagcgg ccgtccttgg gccggcgcga cggctgcaca
     1141 taggcggcgt tccacgggtt cggcccgagc gcccgcagcg tggtagccgg atggaacgtc
     1201 cctgccccga cctccatgtc gtagggctgc aggatgacgc agccgtagtc cgcccaatag
     1261 cgctgcaggg cgaggatgag gccctggaac gagcgctcgg gacgcatatg ggacggcagt
     1321 tcggccatgt gggcttgatc gggacctcta gctcggtggt cgtggcgcgt ggaacctata
     1381 ggtggcttgc gcgcgggggg tcaagcgccg cgcccgtctc gacacggtcg cgtcgggatg
     1441 gttgtctctc tagggacgtc ctgataggcg ccaaggagga gttccgttcc gtgcaggcat
     1501 caagttctat cgctctggtc atcgtcagcc ttgcggcatg gctgtcgccc gccgccgctc
     1561 aggactatcc gaaccggccg atccgcatga tcgtggcatt tgcggccggc ggcaccacgg
     1621 atttcgtggc gcgactcatc gcggataagg ccaagggcac gctcggccag aacatcgtgg
     1681 tcgagaacag gcccggcgcc aacggcgcca tcggggctga ttacgtggcg aagtccgagc
     1741 ccgacggtta caccttgttc ttctcgaccg ccggcgcgat cacgatcaat ccgagcttgc
     1801 ggtcggacct gccgtatgac ccggtgagag acttcgcccc ggtggcgccg atcgcccgca
     1861 acaccgtgct gttcgcggcc gggccggccc tgaaggtcga tgccgcgcag gacatgctgg
     1921 cgctcgcacg ggcgaaaccc ggcgccatca cggtcgccat cacgggcgtc ggcgcgattt
     1981 cgcatctggc gatcgagttg ctgcagcatg ccgccggcat caagctgcaa tacgtgccct
     2041 atcggggtgc cggccaggcg atttcggatt ttatcggcgg tcaggtgaac gccatgagcg
     2101 ccgaagtgcc ggtgctgatg ccgcagctca agaccggcaa ggcgaaggtg ttggcggtcg
     2161 ccgcacagaa ccgcagcgac gtactgcccg acgtccctac gttcgcggag ctgggttttg
     2221 ccgacgtggt ggccgacaac tggtccgggg cactggcgcc cgcccggacg ccgccggtcg
     2281 tcatcgccaa gctcaatgcg gcgctcaatg ccgccgtgca caaccccgag acccgcgcca
     2341 agcttgccga caacggcgtc tcggcgacgg gcggctcgcc tgaggatctg atcgcgctga
     2401 tcgcggccga aacggcgcgc tggcgcaagg tcgtgaaaga gatcggcgtt aaagtgcagg
     2461 ccgagtagcg ctcattgcgg ccggtacacg ccgctgtgcg gatcgcgccg caaggtcggc
     2521 aattcgtcgc gcgcgaccgt ctggctcgcc cgctcacggg cgtcgagttc tgcattcacg
     2581 cgccgccact cccgggccag gaccttggaa acggccacgg ccccgattgc ggcgagcgtc
     2641 caggcgatga caggcgggag cggcagcata ttggttgtcc gttgcagacg cgctgttgac
     2701 gacggcgagc tcgtttataa tcgcatctta tgccggttcg caccacggct cacaggccaa
     2761 atcgggccca gatggcgcga gcttcgaggg ccgatatgag gtcgtcgacg agcccgcgtg
     2821 gctcgatgcc gaggagcccc tccgtcgcaa taccggccac gccaggcgtc cgtcgcccga
     2881 acagtgaacg ctccgccggg accggcggcg tcacgacgtc ttcgccgaag cgctgacgca
     2941 ggaacccacg cacgtcgccg agctgatcga ccaatccgag gtccttcgcg gtcttggcca
     3001 cccaatattc cccggagaac acggtatttt cggggcccgt gagccgctcg ccccggcgct
     3061 cgcggacaag cccgatgaac atgctgtgga tgtcccgctg gatcgccttg aggcgcgcca
     3121 cgtcgtcctc attctcggt
//
LOCUS       DASWGA010000286         3159 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2442154, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000286 DASWGA010000000
VERSION     DASWGA010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3159
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2442154"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1249
                     /locus_tag="VF991_06935"
     CDS             <1..1249
                     /locus_tag="VF991_06935"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HEX9556213.1"
                     /translation="DQHDPVSVLRRKRRRDAGEQASMTPPLRQALLAQYAAHKSWSAQ
                     LHHDNLVALAETRPELRPVPSYATVLRFLAAHGLTKHRPMTMRQTDGALAATARLEAR
                     EVRSYEAEFVNGTWHWDCHYGSRKVLTPRGEWRTPILFGVLDDRSRLVCHLQWYLSES
                     AENIAHGLSQAMQKRGLPRAAMSDNGAAMTATEITEGLTRLGILHQTTLPYSPYQNGK
                     QEVLWGSVEGRLMAMLEDVDDLTLARLNQATQAWVEYDYNRKRHSEIDDTPLARFLAG
                     PAVTRPCPDAAALRLAFTRTERRTLRRSDCTAVIEGRRFEVPNRYRHLALLEVRFAAW
                     DLGQVHLVDPHTGTVLCRLFPQDKTSNASGLRRGLQPVAAEPVTPPAQARGIGPLLER
                     MIDRQAATGLPPAYLPKDEGDDA"
     gene            1246..2091
                     /locus_tag="VF991_06940"
     CDS             1246..2091
                     /locus_tag="VF991_06940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008651548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9556214.1"
                     /translation="MNNKMLALYGLKWNPFAPNVPTEALHVTTRLESFCWRVQQLAGE
                     GGFALVTGAPGCGKSASLRLLSASLATQRDLMVGVISRPQANIADFYREMGELFGVEL
                     RPHNRYGGAKILRQRWQAHIQSTLCRPVLLVDEAQEVQSAVLAELRLLASAELDSQIL
                     LTIVLAGDGRLAERLRADEFLPLASRMRVRMAIERATPQELQDCLRHALLQAGCPTLM
                     TPELIATICDHAQGNPRALMIMAGELLASAAQREARQIDETLFFETCAVTAPNETRAV
                     IRRRR"
     gene            2088..3041
                     /locus_tag="VF991_06945"
     CDS             2088..3041
                     /locus_tag="VF991_06945"
                     /inference="COORDINATES: protein motif:HMM:NF024872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9556215.1"
                     /translation="MTQLPVQPAWRLADCPEQQRWLVDGLWSDEAVGIIGGEPKCCKS
                     FLALDLAVAVAAGIPCLRRFEVTRPGRVLLYPAEDALHVVRRRLEGICAAAGANLAGL
                     DVQVITAPSLRLDLNADCARLDETVARLKPRLLVLDPFVRLHRIDENVSGDVAPLLAF
                     LRELQRRHAVAVAVVHHARKGAGAIRAGQALRGSSEFHAWGDSNLYLRRDSDDRIVLT
                     VEHRAAAAGPAVTLELTQRDDALALQPIHADPHPESRREPISVDQRITAVLAETCKPR
                     PFAELRASCRIRTTTLYERLAAMTAAGTVIKSADGYWLAAR"
BASE COUNT          528 a         1175 c          957 g          499 t
ORIGIN      
        1 cgatcagcat gacccggtca gcgtgctacg acgcaagcgg cgccgggacg ccggtgagca
       61 ggcatcgatg accccaccgc tgcgccaggc cctactggcg cagtatgccg cccacaaaag
      121 ctggagtgcc cagctgcatc acgacaacct ggtcgccttg gccgagaccc gccccgagtt
      181 gcggccggtg ccgtcctacg cgacggtcct gcggttcctg gccgcccacg gcctgaccaa
      241 gcatcgcccg atgacgatgc gccagaccga tggcgcgctg gccgcaacag cgcggctcga
      301 ggcgcgcgag gtgcgcagct acgaagccga atttgtgaac gggacatggc attgggattg
      361 tcattacggg tcgcgcaagg tgctgacacc gcgcggcgaa tggcgaacgc cgatcctgtt
      421 tggcgtgctc gacgaccgct cgcggctggt ctgtcatctg cagtggtatc tgtccgaatc
      481 ggcagagaac atcgcacacg gcttatcgca ggcgatgcaa aagcgcggcc tgccgcgcgc
      541 cgccatgagc gacaacggcg ccgcaatgac ggcgaccgag atcaccgaag gcctcaccag
      601 gctcggcatc cttcatcaaa ccacgctgcc gtattcgccc taccagaacg gcaagcagga
      661 ggtcctgtgg ggatcggtcg aggggcggct gatggccatg ctcgaagatg tcgacgatct
      721 cacgttagcc cggctcaacc aggcgacaca ggcctgggtc gaatacgact acaaccgcaa
      781 gcgccacagc gagatcgacg acacgccgct ggcacgcttc ctggccggcc ccgccgtgac
      841 gcggccctgc ccggatgccg ccgcgctgcg attggccttc acccgcaccg agcggcgcac
      901 cctgcgtcgc agcgattgca ccgccgtcat cgaaggccgc cgcttcgaag tgccgaaccg
      961 ctatcggcat ctcgccttgc tggaggtccg cttcgccgcc tgggaccttg gccaggttca
     1021 tctcgtcgat ccgcacaccg gcacggtgct ctgccggctg ttcccccagg acaagaccag
     1081 caacgccagc ggcctgcgcc gcggcttgca accggtcgcc gccgagcctg tcacaccgcc
     1141 cgcgcaggcg cgcggcatcg ggccgctcct ggagagaatg atcgaccggc aggcggcgac
     1201 cgggctgccg ccagcctacc tccccaagga cgaaggagac gacgcgtgaa caacaagatg
     1261 ctggcgttgt acggcctcaa atggaatccg ttcgctccca acgtgccgac cgaggcgctg
     1321 cacgtcacca cgcgcctgga atcgttttgc tggcgggtac aacaactcgc cggggaaggt
     1381 ggcttcgcct tggtcactgg cgcgcccggc tgcggcaagt cggcctccct gcgcctcctc
     1441 agcgcatcac tggcgacaca gcgcgacctg atggtcggcg tgatcagtcg gccgcaggcc
     1501 aatatcgccg acttctatcg cgagatgggc gaactcttcg gcgtcgaact gcgcccgcat
     1561 aaccgctatg gcggtgccaa gatcctgcgt cagcgctggc aggcgcatat ccagagcacg
     1621 ctgtgcaggc cagtgcttct ggtcgacgag gctcaggagg tgcagtccgc cgtactcgcc
     1681 gaactgcgcc tgctggcctc cgcggagctc gactcgcaaa tcctgctgac catcgtgctg
     1741 gccggcgacg ggcggctggc cgaacgtctg cgcgccgatg agttcctgcc gctggccagc
     1801 cgcatgcggg tgcgcatggc gatcgaacgc gcgacgccac aggagctcca ggactgcctg
     1861 cggcatgctc tgctgcaagc cggttgccca accctgatga caccggaact gatcgccacg
     1921 atctgcgatc acgcccaggg caatccgcgc gccctgatga tcatggctgg cgagcttctc
     1981 gcgtccgccg cccagcgcga ggcccgccag atcgacgaga cgctgttctt cgaaacttgc
     2041 gccgtgaccg cgccgaacga gaccagagca gtgatccggc gccggcgatg acccagcttc
     2101 cggttcagcc ggcctggcgc ctcgccgatt gccccgagca gcaacgctgg ctcgtcgacg
     2161 gcctatggtc ggatgaagcc gtcggcatca tcggcggcga gcccaagtgc tgcaaatcct
     2221 tcctcgccct cgatctggcc gttgccgtcg ctgccggcat cccctgcctg cgccgcttcg
     2281 aggtcacgcg ccccggtcgc gtcctgctct atcccgccga agacgcgctc catgtcgtcc
     2341 gccgccgcct cgaaggcatc tgcgccgccg ctggcgccaa tctcgccggg ctcgacgtcc
     2401 aggtgatcac cgcccccagc ctgcgcctcg atctcaacgc cgactgcgcg cgcctcgacg
     2461 agaccgtcgc ccggctgaag ccgcggctgc tcgtcctcga tccgttcgtg cgcctgcatc
     2521 gcatcgatga aaatgtcagc ggcgatgtcg cgcctttgct cgccttcctg cgtgagctac
     2581 agcgccgcca tgccgtcgcc gtcgcggtcg tccatcatgc caggaaggga gctggcgcta
     2641 tccgcgccgg tcaggctctg cgcggatcgt cggaattcca cgcctggggc gattccaatc
     2701 tctatctccg ccgcgacagc gacgatcgca tcgtcctgac cgtcgagcat cgcgccgccg
     2761 ctgccgggcc ggctgtgacg ctcgaactca cccagcgtga tgacgctctt gccttgcagc
     2821 cgatccacgc cgatccccac cccgaaagcc gccgcgagcc gatctccgtc gatcagcgca
     2881 tcaccgccgt tctcgccgaa acctgcaaac cgcggccatt cgccgaactg cgcgcatcct
     2941 gccgcatccg caccacaact ctctatgaac gcctcgccgc catgaccgca gccggcaccg
     3001 tcatcaaatc cgccgacgga tactggctcg ccgctcgcta agcgctggcc gccagcccaa
     3061 cctggcacga caccgaggtc gttctcgaca tcaacatccc gccaaacccg ctcaggccat
     3121 gctgcccgca gccacttccc acttccactt cccaggccc
//
LOCUS       DASWGA010000287         8332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_790271, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000287 DASWGA010000000
VERSION     DASWGA010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8332
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_790271"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..890)
                     /gene="selA"
                     /locus_tag="VF991_06950"
     CDS             complement(<1..890)
                     /gene="selA"
                     /locus_tag="VF991_06950"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003525398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEX9556216.1"
                     /translation="MASWPALQPLIAGAGRPLVIESLRAWADAKRGTADVADEAACAR
                     WCEARLAGLLQPSQRRVFNLTGTVLHTNLGRALLAEEAIQAAVEAMRSPTTLEYDLSG
                     GARGERDQHIVPWLTRLTGAEAATAVNNNAAAVLLTLNALAAGREVIVSRGELIEIGG
                     AFRIPDIMARAGCRLVEVGTTNRTHLKDYAAAIGPDTAAIMKVHPSNYVIDGFTKSVA
                     AAELVPLARDKGLPLIEDLGSGTLVDLETWGLPHEPTAREAIAAGVDVVTFSGDKLLG
                     GPQAGLIVGRRHLVERIARNP"
     gene            complement(1043..1174)
                     /locus_tag="VF991_06955"
     CDS             complement(1043..1174)
                     /locus_tag="VF991_06955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556217.1"
                     /translation="MKTVIALLKDKTATSSTTYALMIGLSSSAILVLVRVGVAVAGQ"
     gene            complement(1394..2365)
                     /gene="fdhE"
                     /locus_tag="VF991_06960"
     CDS             complement(1394..2365)
                     /gene="fdhE"
                     /locus_tag="VF991_06960"
                     /inference="COORDINATES: protein motif:HMM:TIGR01562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HEX9556218.1"
                     /translation="MVPPGSRQALSSGPNTPSSGFGENTLGDIAQSDPVRLPDLATVF
                     ARRAERLNALAQGHELEGFLRMIAALVAAQHEALPGLPPGGLPGPAEIAKARLAKRAP
                     LDPATWRRDESWRVALALILDKVDRRLLPEPAQQARQALATAAEADLEALADRFLEGD
                     VPAGDAAKAVFVAAALQVAWTRMAALLEASDLDAADQGQCPACGSPSIAGMIAPGGTK
                     FGHRHLHCSLCATAWRYVRVRCVHCGSTDKVSFRQLAGTSYLRAECCENCQGYSKVFY
                     LESARILEPLADDLGSLGLDVLVGEEGFSRVPNPFVLGVTVHHDGNN"
     gene            complement(2335..2964)
                     /locus_tag="VF991_06965"
     CDS             complement(2335..2964)
                     /locus_tag="VF991_06965"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HEX9556219.1"
                     /translation="MSETPKVVSRYTTAARINHWITAASLILLALSGMALFHPSLFFL
                     TNLFGGGQMTRAIHPWIGVVLAISFLGLFFRFFTLNLWNRDDTVWMKNLGAVINDREE
                     GLPELGKYNAGQKLVFWGQSILILLLFCSGLVLWDVYFEDYTSIDQKRLAAVVHALCA
                     IGAILIWIVHVYAAIWIKGTLRAMTRGSVTRGWSWKHHRKWFRQEVGKP"
     gene            complement(2961..3863)
                     /gene="fdxH"
                     /locus_tag="VF991_06970"
     CDS             complement(2961..3863)
                     /gene="fdxH"
                     /locus_tag="VF991_06970"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0045333 - cellular respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HEX9556220.1"
                     /translation="MATMQSLDIRRRSASNEAPPQIRQTGLEVAKLIDVSKCIGCKAC
                     QAACLEWNDLKQPIGYTDGTYNNPTDLTPTSWTVMRFTEYEHGDDLEWLIRKDGCMHC
                     DDPGCLKACPAPGAIVQYTNGIVDFVSENCIGCGYCVKGCPFNVPRISKVDRKAYKCT
                     LCVDRVAVGQAPACAKACPTQAIYFGSKEDMIVHADHRIADLKSRGFKNAGLYNPPGV
                     GGTHVMYVLHHADKPSLYAGLPDDPRISPMVGLWKGVLKPISLAAIAFAGVFGFLHYV
                     TKGPNEVSEADERKGDELAGGRRS"
     gene            complement(3881..6973)
                     /gene="fdnG"
                     /locus_tag="VF991_06975"
     CDS             complement(3881..6973)
                     /gene="fdnG"
                     /locus_tag="VF991_06975"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014528148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:complement(6380..6382),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HEX9556221.1"
                     /translation="MAVTRRQFMKVSAAGLAASSVGALGFMEAGDALAAGVRPFKLDR
                     ATETRNACPYCAVACGVLIYSMGDKSKNAKSSIIHIEGDPDHPVNRGTLCARGAASLG
                     YVHSVNRLKYPMHRKAGSDKFERVSWDFAMDRIVKLMKDDRDKNFITKNRDGVTVNRW
                     LSTGFFGGSSLSNEAGYLTYKFVRATGILGFEDQARIUHGPTVASLGPTFGRGAMTNS
                     WNDIKNTDLVLIMGGNAAEAHPCGFKWVTEAKANNGAKLIVVDPRFTRSAAVADVYAP
                     IRPGTDIAFLSGVMRYLLGNGKIHQEYVKAYTNAAYIVKDGYGFQDGLFTGFDAARKS
                     YVDRSSWDYELDEQGMAKVDETLQNPRCAINLLKAHVDRYTPEMVERITGTPKAKFLQ
                     ICEMIATTSTPDHTMTSMYALGWTQHTTGAQNIRSMAMIQLLLGNMGMPGGGVNALRG
                     HSNVQGITDLALLSTSTPGYLVLPTDREPTYADYIKTRGFKPLRPGQTSFWQNYEKFF
                     VSQQKSFFGAAATKDNDWAYDYLPKFDVSYDTLKMVDMMAAGQMNGLFCQGLNILMAS
                     PDKAKALSGLTKLKWLVIIDPLETETARFWENHGEFNNVDPKAIQTEVIQLPASAYAE
                     EEGSATNSSRVIMWHWKAADGPGESKSDLEIISDLHLRLRALYAKDGGAFSDPIVKLA
                     WSYTRPGNPDPAEVLKEINGYAIEDLPDPADPNKMLLRAGQLLPTFGMMRADGKTSGG
                     CWIYTGVYTEAGNMSMRRDASDPTGLGIFPNWGFSWPANRRVLYNRASADPGGKPWSE
                     RKKYMWWNGARWAGGDVPDYAPTMAPDKAVGPFIMNQEGSGRLFARGTMPDGPFPEHY
                     EPMDAFIANPLHPKVSSNPVVRVFAADAKSFGTPDKFPIVATTYRLAEHFHYWTKNVH
                     DNAVLQPELFVEIGERLAKAKSIQDGDWVEISSQRGAIKAKACVTKRFRPIMVDGKPC
                     DVVGLPIHYGFIGLTRKSQPVNTLTPSVGDAAVYTPEYKAFLVDVKKTTPPAQSPAVA
                     "
     gene            complement(7120..>8332)
                     /locus_tag="VF991_06980"
     CDS             complement(7120..>8332)
                     /locus_tag="VF991_06980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556222.1"
                     /translation="LLGIVFALALMEVSAIAWLYVEDGRYTPAAELFERTQNTYVRDT
                     TKGTACRYVDTLYPHPYVAFVHHANPPCGLPWVNNVGLFGPDFPTVKPKDYYVVMLIG
                     GSVASQLGQNQKPPAPRYLEEELNSKYVSPNGKPWMVLNGGDGAWKEPQPFILFSLYA
                     SSVDAMISLGGFNEHYAFRPYSTERLEAPASNFLEVNPFVADENFGDAAIGWVMGRIA
                     GSLALNPILGQSHAAYLVIRGIEAAAKGKDSFKSTKRTTIPGMFALPQDIRGNADRVF
                     AVQLGLYQKYLRAEEVVAHDNGVKSAYFFQPVPAWGKTLTEEEKRVVGDLSYGDLYRR
                     IVTGMMTLRERGLAMFDLGDIFMDEKGSIYADHIHYLRYGRADESHGNRLMAARIGEL
                     LSQTWGLQRKP"
BASE COUNT         1434 a         2615 c         2789 g         1494 t
ORIGIN      
        1 ggattgcgcg cgatgcgctc gaccagatgc ctgcgcccga cgatgaggcc ggcctgcggg
       61 ccgcctaaaa gcttgtcgcc ggagaaggtg acgacatcga cacccgctgc gatcgcctcg
      121 cgcgccgtcg gctcgtgcgg cagaccccag gtctcgaggt cgacaagcgt gccgctgccc
      181 aggtcctcga tcagcggcag gcccttgtcg cgggcaagcg gcacgagttc ggcggccgcc
      241 accgatttgg tgaagccgtc gatgacgtag ttcgagggat ggaccttcat gatcgccgcg
      301 gtatcggggc caatggcggc ggcatagtcc ttgagatgcg tgcggttggt ggtgccgacc
      361 tcgaccagcc ggcagccggc gcgagccatg atgtcgggaa tgcggaaggc gccgccaatc
      421 tcgatcagct cgccgcgcga gacgatgacc tcgcggccag ccgccagcgc gttcagcgtc
      481 aagagcacgg ccgcggcatt gttgttgacc gcggtcgccg cctcggcgcc ggtgagccgc
      541 gtcagccacg gcacaatgtg ctggtcgcgc tcgccgcggg cgccgcccga gagatcgtat
      601 tcgagcgtgg tcggcgagcg catcgcctcg acggcggcct ggatggcttc ctcggcgagc
      661 agcgcgcggc cgaggttggt gtgcagcacc gtgccggtca ggttgaagac acggcgctgc
      721 gagggctgga ggaggccggc tagcctcgct tcacaccagc gcgcgcaggc tgcctcgtcg
      781 gcgacgtcgg cggtgccgcg cttggcatcg gcccaggctc gcagcgactc gatcaccagc
      841 ggccgtccgg cgcccgcgat cagcggctgc agagccggcc aactggccat gcgatcgatc
      901 gatggtggac ggaggaggac gttcctctcg gcacggtcgg cacgcgacac ggtcatttcc
      961 cttcgacggc aggccaggac aagacagatt ggctgagccc ggccggtcga tcaatggcaa
     1021 cgccgctgcc ggtagaagcc gcctactggc cggcgacggc caccccgacg cggaccagga
     1081 ccagtatggc cgaggaggac aagccgatca tgagcgcata cgtcgtggac gaagtggcgg
     1141 tcttgtcctt caaaagtgca ataacggttt tcatgcgaaa ccccaaacct agagaccccg
     1201 ccggccggag cgaacccctc gcccctggtg gccagcaccc ttgccctcgc ccgacggacg
     1261 ggggcctcat cccacacaaa aagcaaaacc ggtaccctta gtcagtccgg cgctgggacc
     1321 cctcccgtgc gccgcgcagc gttatagagc gcccgattgt atcgtgcatc tccaaaccat
     1381 atcggcaatg gtatcaattg tttccgtcgt ggtggaccgt cacgcccagc acaaatggat
     1441 tgggcactcg cgagaatccc tcctcgccga ccagcacgtc gaggcccagc gagccgagat
     1501 cgtcggccag cggctccagg atcctggcgc tctcgagata gaagaccttg gaataaccct
     1561 ggcagttctc gcagcactcc gcgcgcaggt aggacgtgcc ggcgagctgg cggaaggaga
     1621 ctttgtcggt gctgccacaa tgcacgcagc gcacccggac atagcgccag gccgtggcgc
     1681 acagcgagca atgcaagtgg cggtggccga acttggtgcc gcccggcgcg atcatgccgg
     1741 caatcgaggg cgagccgcag gcggggcatt ggccttggtc ggcggcgtcg aggtcggatg
     1801 cctcgaggag ggccgccatg cgcgtccagg cgacctgcag tgccgccgcg acgaacaccg
     1861 ccttggccgc gtcgcccgcc ggcacgtcgc cctccaggaa gcgatccgcc agggcttcca
     1921 gatcggcctc agcggcggtt gccagggcct ggcgcgcttg ctgcgccggt tcggggagca
     1981 gccggcggtc gaccttgtcc agaatgagcg ccagcgccac gcgccagctc tcgtcgcgcc
     2041 gccaagtcgc gggatcgagc ggcgcgcgtt tggccagtct cgccttggcg atctcggccg
     2101 gtcccggcag gccacccggc ggcaggcccg gcagcgcctc gtgctgggca gccacgaggg
     2161 ctgcgatcat gcgcaggaag ccttcgagct cgtgtccttg ggccagcgca ttcagccgtt
     2221 cggcgcggcg ggcgaacacc gtggcgagat cgggcaggcg gacaggatcg ctctgagcga
     2281 tgtcacccag cgtgttctca ccgaagccgg aggatggggt attcgggccg ctgctcaggg
     2341 cttgccgact tcctggcgga accacttgcg atggtgcttc cagctccagc cgcgagtcac
     2401 cgagccgcgg gtcatggcgc gcaaggtgcc cttgatccag atggcggcat agacatgaac
     2461 gatccagatc aggatggcgc cgatcgcgca cagcgcatgg accaccgccg cgagccgctt
     2521 ctggtcgatc gaggtgtagt cctcgaaata gacgtcccac agcacgaggc ccgagcagaa
     2581 cagcagcagg atcaggatcg actggcccca gaagaccagc ttctggccgg cattgtactt
     2641 gccgagctcg ggcaggccct cttccctgtc gttgatcacc gcgccgaggt tcttcatcca
     2701 gaccgtgtcg tcacggttcc acaaattgag cgtgaagaag cggaagaaca gcccgaggaa
     2761 gctgatggcc agcaccacgc cgatccaggg atggatcgcg cgggtcatct ggccgccgcc
     2821 gaacaggttg gtgaggaaga acagcgacgg gtggaacagc gccatgccgc tcagcgccag
     2881 caggatcagc gacgccgccg tgatccagtg attgatgcgg gcagccgtgg tgtagcggga
     2941 gacgaccttc ggggtctcgc tcatgaacgc cttcctccgg ccagctcgtc acccttgcgc
     3001 tcgtcggctt cggagacctc gttcggtccc ttggtgacgt agtgcaggaa gccgaacaca
     3061 ccggcaaagg cgatggcggc aagtgaaatc ggcttcagga cgcccttcca caatccgacc
     3121 atcggactga tccgcggatc gtcgggcagg ccggcataga gcgagggctt gtcggcatgg
     3181 tgcagcacgt acatcacgtg cgtgccgccg acgcccggcg ggttatagag cccggcgttc
     3241 ttgaagccgc gcgacttcag gtcggcgatg cgatggtcgg catggacgat catgtcctcc
     3301 ttggagccga aatagatcgc ctgggttggg cacgccttgg cgcaggccgg cgcctggccg
     3361 actgcgacgc ggtcgacgca caacgtgcac ttgtaggcct tgcggtcgac cttggagatg
     3421 cgcggcacgt tgaacgggca gcccttcacg cagtagccgc agccgatgca gttctccgac
     3481 acgaagtcga cgatgccgtt ggtgtactgc acgatggcgc ccggcgccgg gcaggccttc
     3541 aggcagcccg ggtcgtcgca atgcatgcag ccgtccttgc ggatcagcca ttcgaggtcg
     3601 tcgccatgct cgtactccgt gaagcgcatc acggtccacg aggtgggcgt caggtcggtc
     3661 gggttgttgt aggtgccgtc ggtgtaaccg atcggctgct tcaggtcgtt ccactccagg
     3721 caagccgcct ggcaggcctt gcagccgatg cacttgctga catcgatcag cttggcgact
     3781 tcgaggccgg tctggcggat ctgcggcggc gcttcgttcg aggcggagcg gcggcggatg
     3841 tcgagggatt gcatggtagc cattttctgc cctccccccg ctatgccact gccggcgatt
     3901 gcgccggtgg cgtggttttc ttcacgtcga ccaggaacgc cttgtattca ggcgtgtaga
     3961 cggcggcgtc gccgaccgag ggcgtcaggg tgttcaccgg ctgcgatttg cgggtgagcc
     4021 cgatgaagcc atagtggatc ggcaggccga ccacgtcgca cggcttgccg tcgaccatga
     4081 tcggccggaa gcgcttggtc acgcaggcct tggccttgat ggcgccgcgc tggctcgaga
     4141 tctcgaccca gtcgccatcc tggatgctct tggccttggc caggcgctcg ccgatctcga
     4201 cgaacagttc cggctgcagg accgcattgt cgtggacgtt cttggtccag tagtggaaat
     4261 gctcggcaag gcgataggtg gtggcgacaa tcgggaactt gtccggcgtg ccgaacgact
     4321 tggcatcggc ggcaaacacc ctcaccaccg gattgctgct gaccttggga tgcagcgggt
     4381 tggcgataaa ggcgtccatc ggctcgtagt gctcggggaa cggaccgtcg ggcatggtgc
     4441 cgcgcgcgaa cagacggccg ctgccttcct ggttcatgat gaatgggccg accgccttgt
     4501 cgggcgccat ggtcggcgca tagtcgggca cgtcgccgcc ggcccatcgc gcgccgttcc
     4561 accacatgta tttcttgcgc tcgctccacg gcttgccgcc gggatcggcc gaggcgcggt
     4621 tgtagaggac ccgtcggttg gccggccagg agaagcccca gttggggaag atgccgagcc
     4681 cggtcgggtc gctggcgtcg cggcgcatcg acatgttgcc ggcctcggta tagacgccgg
     4741 tatagatcca gcaaccgccc gaggtcttgc cgtcggcccg catcatgccg aaggtcggca
     4801 ggagctggcc ggcgcgcagc agcatcttgt tgggatccgc cggatcgggc aggtcctcga
     4861 tcgcgtagcc gttgatctcc ttcaggacct ccgccggatc gggattgccg ggccgcgtgt
     4921 aggaccacgc cagcttgacg atcggatcgg agaaggcgcc gccgtccttg gcatagagcg
     4981 cgcgcaggcg aagatggaga tcggagatga tctcgaggtc gctcttcgac tcaccaggac
     5041 cgtccgccgc cttccagtgc cacatgatga cacggctgga attggtggcg ctgccctcct
     5101 cctcggcata ggccgacgcc ggcagctgga tgacctcggt ctggatcgcc ttgggatcga
     5161 cgttgttgaa ctcgccgtga ttctcccaga accgcgccgt ctcggtctcc agcgggtcga
     5221 tgatgaccag ccatttgagc ttggtcaggc cggacagggc cttggccttg tcgggcgacg
     5281 ccatcaggat gttgaggccc tggcagaaca ggccgttcat ctggcccgcc gccatcatgt
     5341 cgaccatctt cagcgtatcg taggagacgt cgaacttggg caggtaatcg taggcccagt
     5401 cgttgtcctt ggtcgccgcc gcgccgaaga agctcttctg ctggctaacg aagaactttt
     5461 cgtaattctg ccagaagctg gtctggccgg gacgcaacgg cttgaagcca cgcgtcttga
     5521 tgtagtcggc gtaggtcggc tcgcgatcgg tcggcaggac gagatagccc ggtgtcgagg
     5581 tgctgagcag cgccaggtca gtgatgccct gcacgttgga atggccgcgc agcgcgttca
     5641 cgccgccgcc cggcatgccc atgttgccca gcaggagctg gatcatggcc atcgatcgga
     5701 tgttctgggc gccagtcgtg tgctgcgtcc agccgagcgc atacatcgac gtcatggtgt
     5761 ggtcgggcgt cgatgtcgtg gcgatcatct cgcagatctg caggaacttc gccttgggcg
     5821 tgccggtgat gcgttcgacc atctccggcg tatagcgatc gacatgcgct ttcaggaggt
     5881 tgatcgcgca acgcgggttc tgcagcgtct cgtcgacctt ggccatgccc tgctcgtcga
     5941 gctcgtagtc ccagctcgag cggtcgacgt agctcttgcg cgccgcgtca aaccccgtga
     6001 acagcccgtc ctggaagccg tagccatcct tcacgatgta ggcggcgttg gtgtacgcct
     6061 tgacgtattc ctggtggatc ttgccgttgc ccagcaggta acgcatgacg cctgacagga
     6121 aggcgatgtc ggtacccggc cggatcggcg catagacgtc ggccaccgcg gccgaacgcg
     6181 tgaagcgcgg atcgaccacg atcagcttgg cgccgttgtt ggccttggct tcggtgaccc
     6241 acttgaagcc gcaggggtgg gcttcggcgg cattgccgcc catgatcaga acgagatcgg
     6301 tgttcttgat gtcgttccag ctgttcgtca tcgcgccgcg tccgaatgtg gggccaagac
     6361 tggccaccgt cggaccgtgt caaattcgtg cttggtcttc gaaccctagt atcccagtcg
     6421 cacggacgaa cttgtaggtg aggtatccgg cctcgttgct gagcgaggag ccgccgaaga
     6481 aaccggtgct gagccagcgg ttgaccgtga cgccatcgcg gttcttggtg atgaagttct
     6541 tgtcgcgatc gtccttcatc agcttgacga tacggtccat cgcgaagtcc cagctcaccc
     6601 gctcgaactt gtcggagccc gccttgcggt gcatcgggta cttcagccgg ttgacgctgt
     6661 gcacgtagcc gagcgacgcc gcgccgcgcg cgcagagtgt gccgcgattg accggatggt
     6721 cgggatcgcc ctcgatgtgg atgatggacg acttggcgtt cttcgacttg tcgcccatcg
     6781 aatagatgag gacgccgcag gcgaccgcac agtagggaca cgcattgcgc gtctcggtgg
     6841 cgcgatcgag cttgaagggc ctgacgcctg ccgcgagcgc atcgcccgcc tccataaagc
     6901 ccagggcgcc aacggaagag gcggcgaggc cagcggcgct caccttcatg aattgccggc
     6961 gtgtaaccgc catggttcgc tccatcccaa tcgacgctta tcagtgagcg tttaaagcgc
     7021 cctttatttg tgtgcgtctc gtagagtgaa actcggcaag tcaggtgaat caatagaaaa
     7081 ccaccaaaac ggccgggaaa tcccgttttt gtgaagaacc tacggcttgc gctgcaggcc
     7141 ccaggtttgc gagagcaact caccaatccg ggcggccatc aggcggttgc cgtggctctc
     7201 atcggcccgg ccgtagcgga gatagtggat gtggtcggcg tagatcgagc ccttctcatc
     7261 catgaagatg tcgcccagat cgaacatcgc cagtccgcgc tcgcgcaatg tcatcatgcc
     7321 ggtgacgatc cgccgataga ggtcgccgta ggaaagatcg ccgacgacgc gcttttcctc
     7381 ctccgtcagg gtcttgcccc aggccggcac gggctggaag aaataggccg acttcacgcc
     7441 attgtcgtgc gccaccacct cctcggccct caggtacttc tgatagaggc cgagctggac
     7501 ggcgaagacc cggtcggcat tgccgcggat gtcctggggc agcgcgaaca tcccggggat
     7561 ggtcgtgcgt ttggtggact tgaaactgtc cttgcccttg gcggcggcct cgatgccacg
     7621 aatgacgagg taggcggcat gcgattggcc gaggatggga ttcaacgcca ggctgccggc
     7681 gatacgtccc atgacccagc cgatcgccgc gtcgccgaaa ttctcgtcgg cgacgaacgg
     7741 attgacctcg aggaaattgg aggccggcgc ttcgagccgc tcggtcgaat agggccgaaa
     7801 ggcgtagtgc tcgttgaagc cgccgagcga gatcatcgca tcgaccgagc tggcatagag
     7861 cgagaacagg atgaacggct gcggttcctt ccaggcgccg tcaccgccgt tcaagaccat
     7921 ccacggcttg ccgttggggc tgacgtattt gctgttcagt tcctcttcga ggtagcgcgg
     7981 cgccggaggt ttctggttct ggccaagctg cgaggcgacc gagccaccga tcagcatgac
     8041 gacgtaatag tccttcggct tgacggtcgg aaaatccgga ccgaacaggc cgacattgtt
     8101 gacccaaggc agcccgcacg gcgggttggc gtgatggacg aacgccacgt aaggatgcgg
     8161 atagagcgtg tcgacgtagc ggcaggccgt acccttggtc gtgtcgcgca cataggtgtt
     8221 ctgggtgcgc tcgaacaact cggcggcggg tgtatagcgg ccatcttcga cgtacagcca
     8281 ggcgatcgcg ctgacctcca tcaaagccag cgcaaacacg atacccagaa gg
//
LOCUS       DASWGA010000288         4801 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1422355, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000288 DASWGA010000000
VERSION     DASWGA010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4801
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422355"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /locus_tag="VF991_06985"
     CDS             complement(<1..687)
                     /locus_tag="VF991_06985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011424843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX9556223.1"
                     /translation="MKGIVLSGGSGTRLYPMTRAANKQLLPVYNKPMVYYPLTTLMLA
                     GCREILLVVNPQDEEAYRRLFGDGRQWGLEISYAVQPKPGGIAEVFLVGRGFVGKDRV
                     GLILGDNLFYGDALPAMAERGARGSGAVIYAYWVSDPSAYGVVEFDAADRPVGIVEKP
                     KQPRSSWAVTGLYFYDADVCDIAANIPRSARGELEITDVNAHYLKQGRLTVEKLGRGY
                     AWLDTGTPSSL"
     gene            710..1201
                     /locus_tag="VF991_06990"
     CDS             710..1201
                     /locus_tag="VF991_06990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HEX9556224.1"
                     /translation="MQSPQQLFARLQELGIAQRTVKHPPVFTVEEAKALRGDLPGHHV
                     KNLFLRNKKEEMWLVVALEDRAIDLKRLGEALGAGRLSFGSPERLRRHLGIEPGSVTP
                     LALINDQAQAVQLVLDRGLADGGPVNVHPLVNTMTTAVAPADLLRFFEATGHSPRWLD
                     FPL"
     gene            1216..2115
                     /locus_tag="VF991_06995"
     CDS             1216..2115
                     /locus_tag="VF991_06995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEX9556225.1"
                     /translation="MMLGRRSLAAALLFGALPAFAQTRPKVVATFSILGDLVREVGGE
                     RVDLAVLVGADTDAHTYQPKPSDARTLAGAQALVSNGLGFEGWMDRLAKAAPFKGRAI
                     VATVGVPILDATPSPGHSHTHGPDPHCWQDVARTRRYVANIAEGLVAADAVNAASYRE
                     RAQSYDKRLAQLDQWIKAEIAKVPPAQRKAITGHDAFHYFASAYGVQLHSPRGYSTES
                     EPSARDVAALIREVREQKIKALFVENMTNPGLVDQIARESGGVAGPRLYSDALSAPGG
                     PAATYEAMMRHNVTALVAGMLKN"
     gene            complement(2153..3058)
                     /gene="folD"
                     /locus_tag="VF991_07000"
     CDS             complement(2153..3058)
                     /gene="folD"
                     /locus_tag="VF991_07000"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012170833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEX9556226.1"
                     /translation="MAEAKLIDGKAYAAGLRHRVAKGVADLIAKGGPTPGLATVLVGA
                     DPASQVYVRSKGKMAAELGMASFDHRLSAGTSEAELLALIARLNADPDVHGVLVQLPL
                     PKHIDTGHVLLAVDPAKDVDGFHPFNAGRLASVAPGAPLDFPVPCTPLGVSMLLHDVL
                     GSLAGLKALVIGRSNLVGRPVAQLLLRADCTVTIAHSRTRDLAALSRQADIVVAAIGR
                     PEFVRGDWIKPGAAVIDVGINRVPTEDGKSRLVGDVAFAEALKVAGHLTPVPGGVGPM
                     TVACLMFNTWQEARRVAGLPFRSAD"
     gene            complement(3051..3377)
                     /locus_tag="VF991_07005"
     CDS             complement(3051..3377)
                     /locus_tag="VF991_07005"
                     /inference="COORDINATES: protein motif:HMM:NF014633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HEX9556227.1"
                     /translation="MRDDPAFLRRTDKGVTIALRAQPRARRTTLDCTGRHALKASVTA
                     PAEDGRANKAVIELLAAEWHLPKSAFEVTRGAAARDKVLSISGDPAGLAGRIAAWLRQ
                     RAGDHG"
     gene            complement(3383..3667)
                     /locus_tag="VF991_07010"
     CDS             complement(3383..3667)
                     /locus_tag="VF991_07010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEX9556228.1"
                     /translation="MLSLLLLIDKVLEIYSWVIIAAAILSWLVAFGVINVRNQFIRVV
                     VDLLYRLTEPVLRPIRRILPNLGGVDISPIVVLLLIFFLRHLIVEYMFGR"
     gene            complement(3756..4400)
                     /locus_tag="VF991_07015"
     CDS             complement(3756..4400)
                     /locus_tag="VF991_07015"
                     /inference="COORDINATES: protein motif:HMM:NF012708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEX9556229.1"
                     /translation="MGVEIAALMSFFGLTSAFALIGAVLAAWMAWRIVEKAGFPGWTG
                     LAAILLTLTAVASIVPLVLLWVFAFMRWPRDEPARQLGYDAQAGGPARPSPTPALAPP
                     PVTLADRRGWRLTGSLPGGGGVAFAIDGSAAAYVLTGAPAAQAGELSLPDPSVGQPHA
                     RLLTAAGRLGLEDLGSAGGTFIDGARLLPEHGPRDISAARAIRLGSVELALSRA"
     gene            complement(4404..4646)
                     /locus_tag="VF991_07020"
     CDS             complement(4404..4646)
                     /locus_tag="VF991_07020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556230.1"
                     /translation="MTYFVAWVLGLGSLALLVLAIGHLLVALVLIIPTWRICTRAGFS
                     GALSLFHLVPFIGSLIVMAVLAFSPWPNGEASPQRR"
     gene            complement(4650..4790)
                     /locus_tag="VF991_07025"
     CDS             complement(4650..4790)
                     /locus_tag="VF991_07025"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HEX9556231.1"
                     /translation="MDSFVAMNEVYGRPEYFGAPPPARSTVEVARLPRDVLVEIEVVA
                     LV"
BASE COUNT          830 a         1679 c         1596 g          696 t
ORIGIN      
        1 gaggctcgac ggcgtgccgg tgtcgagcca ggcatagcca cggcccaact tctcgaccgt
       61 gaggcggccc tgcttgaggt agtgtgcgtt gacgtcggtg atctcgagct cgccgcgcgc
      121 cgagcgcggt atgttggcgg cgatgtcgca gacgtcggca tcgtagaaat agagtcccgt
      181 caccgcccag ctcgagcgcg gctgtttggg tttctcgacg atgccgaccg gccgatcggc
      241 agcatcgaat tcgaccacgc cataggccga cgggtcggac acccagtagg cgtagatcac
      301 cgcgccgctg ccgcgggcgc cgcgctcggc catcgccggc agcgcatcgc cgtagaacag
      361 gttgtcgccc aggatcaggc cgaccctgtc cttgccgacg aagccgcggc cgaccaggaa
      421 cacttcggcg atgccgccgg gcttgggctg cacggcatag ctgatctcga ggccccactg
      481 gcggccgtcg ccgaacaggc ggcggtaggc ctcctcgtcc tgcggattga cgaccagcag
      541 gatctcgcgg caccccgcca gcatcagcgt ggtaagcggg taatagacca tcggcttgtt
      601 gtagactggc aggagctgct tgttcgcagc ccgggtcatc gggtaaagcc gcgtgccgct
      661 gccgccggac agaacgatgc ccttcattcg acccatgtaa cgcgacccga tgcagagccc
      721 gcaacaacta ttcgcccgcc tgcaagagct gggcatcgcc cagcgcaccg tcaagcatcc
      781 gccggtgttc accgtcgagg aggccaaggc gctgcgcggc gacttgcccg gccatcacgt
      841 caagaacctc ttcctgcgca acaagaagga ggagatgtgg ctggtggtgg cgctcgagga
      901 ccgcgccatc gacctcaagc gcttgggcga agcgttgggc gcgggccggc tttcgttcgg
      961 cagtcccgag cggctcaggc gacatctggg catcgagccg ggatcggtga cgccgctggc
     1021 gctgatcaac gaccaggccc aggccgtgca gctcgtgctc gatcgcggtc tcgccgacgg
     1081 cgggccggtc aatgtccatc ccctggtcaa caccatgacc acggccgtcg cgccggccga
     1141 cctcctgcgc tttttcgaag ccaccgggca ttcgccgcgc tggctcgatt tcccgctctg
     1201 atgtaacatt ataacatgat gctcggtcgt cgctcgcttg cggcagcgct gctgttcggc
     1261 gccttgccgg cctttgccca aaccaggccc aaggtcgtgg cgaccttctc cattctcggc
     1321 gacctggtgc gcgaagtggg cggcgagcgc gtcgatctcg ccgtcctggt cggcgccgac
     1381 accgacgccc acacctacca gcccaagccg agcgacgcgc gcacgcttgc cggcgcgcag
     1441 gcgctggtga gcaacgggct gggcttcgag ggctggatgg accgcctcgc caaggcggcg
     1501 cccttcaagg gtcgcgccat cgtggcgacc gtcggcgtgc cgatcctgga cgccacgccg
     1561 tcgcccggcc acagccacac ccacggcccc gacccacatt gctggcagga cgtggcccgc
     1621 acgcgccgct acgtcgccaa catcgccgag ggcctggttg cggccgatgc cgtcaacgcc
     1681 gcctcctacc gcgagcgcgc gcaatcctac gacaaacggc tcgcccagct cgaccagtgg
     1741 atcaaggcgg aaatcgccaa ggtcccgcca gcccagcgca aggccatcac cggccacgat
     1801 gcgttccact atttcgccag cgcctatggt gtgcaactcc actcgccgcg cggctacagc
     1861 accgagagcg aaccgtcggc cagggacgtg gcggcgctga tccgcgaggt gcgcgagcag
     1921 aagatcaagg cattgttcgt cgagaacatg accaaccccg gcctggtcga ccagatcgcc
     1981 cgcgagtccg gcggcgtggc cggcccgcga ctctacagcg atgccctgtc ggcgcccggc
     2041 ggcccggcgg cgacctacga ggcgatgatg cgccacaacg tgacggcgct ggtcgccggc
     2101 atgttgaaga actaacgagt ctcctgcctc ccccgtcata cgggggaggg cgttagtccg
     2161 ccgacctgaa cggcagtccc gccacgcggc gcgcttcctg ccaggtgttg aacatcaggc
     2221 aggccacggt catcggtccg acgccacccg gcaccggcgt gagatggccc gccaccttca
     2281 gcgcctcggc aaaggcgacg tcgcccacca gccggctctt gccgtcctcg gtcggcaccc
     2341 ggttgatgcc gacatcgatc accgccgcac cgggcttgat ccagtcgccg cgcacgaatt
     2401 ccggccggcc gatcgcggcg accacgatgt cggcctggcg gctgagcgcg gccaggtcgc
     2461 gcgtgcgcga atgggcgata gtgaccgtgc agtcggcccg cagcagaagc tgcgccaccg
     2521 gacggccgac aaggttggaa cggccgatta caagggcttt tagtcctgca agcgagccca
     2581 gcacgtcgtg cagcagcatc gacacgccga gcggcgtgca tggcacgggg aagtcgagcg
     2641 gtgcgccggg ggcgaccgag gccaaccgtc cggcattgaa ggggtgaaag ccgtcgacat
     2701 ccttggccgg atcgaccgcc agcagtacgt gcccggtgtc gatgtgcttg ggcagcggca
     2761 gctgcaccag gacgccgtgg acgtcgggat cggcgttcag gcgggcgatc aaggccagca
     2821 gctcggcttc cgatgtccca gcagacaaac ggtggtcgaa gctcgccatg ccgagctcgg
     2881 ccgccatctt gcccttgctg cgcacataga cctggcttgc cgggtcggcg ccgaccagca
     2941 cggtcgccag gcccggcgtc ggtccgccct tggcgatcag gtcggccacg cccttggcca
     3001 cgcggtgacg caggccggcg gcgtatgcct tgccgtcgat cagtttcgcc tcagccatga
     3061 tcccccgccc gttgccgcag ccacgccgcg atccgtccgg caagtccggc gggatcgccg
     3121 gaaatgctta gaaccttgtc gcgagcggcg gcgccgcgcg tgacttcgaa cgccgatttc
     3181 ggcaggtgcc actcggcggc cagcagctcg atcacggcct tgttggcccg gccgtcctcg
     3241 gccggcgccg tcaccgaggc cttgagcgca tgccggccgg tgcagtcgag ggttgtgcgg
     3301 cgggcgcgcg gctgggcgcg cagcgcgatc gtcacgccct tgtcggtgcg gcgcaggaat
     3361 gccggatcgt cccgcaaccg agctaccgtc cgaacatgta ctcgacgatg agatggcgca
     3421 ggaagaagat cagcaacagc accacgatcg gcgaaatatc gacgccgccc agattgggca
     3481 gtatccgccg gatcgggcgc agcaccggct cggtcagccg atagagcaga tcgaccacca
     3541 cgcggatgaa ctggttgcgc acattgatga cgccgaacgc caccagccag ctcaagattg
     3601 cggctgcgat gatgacccac gaatagatct cgagaacttt gtcgatcagc aacagcagcg
     3661 acaacattgg ctcttcgtct cccttgccgg caggcgccgg ccgggcaccc tactcggcgg
     3721 cgattgtcga tcacaagtct ctttccggcc gcacctcagg ccctcgacag ggcaagttcg
     3781 acgctgccca ggcgaatcgc gcgggctgcg ctgatgtcgc gcgggccgtg ctcgggcaag
     3841 aggcgcgccc cgtcgatgaa cgtgccgccg gcgctgccga gatcttccag gccaagccgg
     3901 ccggcggccg tcagcagacg ggcatgcggt tggccgaccg aagggtcggg cagcgacagc
     3961 tcgcccgctt gcgcggccgg cgccccggtc aacacgtagg cggccgccga tccgtcgatg
     4021 gcgaaggcca cgccgccgcc accgggaaga ctgccggtca accgccatcc ccgccgatcg
     4081 gccaatgtca ccggcggcgg cgcgagcgcg ggggttggtg aaggccgcgc cggtccgccg
     4141 gcttgtgcgt catatccgag ctgccttgcc ggctcgtcgc gcggccagcg catgaaggcg
     4201 aagacccaca acaacaccag cggcacgatc gaggcgacgg ctgtgagcgt cagcagtatc
     4261 gcggccagtc ccgtccagcc cgggaagccc gctttctcga caatgcgcca ggccatccag
     4321 gcggcaagca cggcgccgat caaggcgaag gcgctggtga gcccgaaaaa gctcatcagg
     4381 gccgcgatct ccacgcccat ggctcagcgc cgctgcggcg aggcttcgcc gttcggccag
     4441 gggctgaagg caagcacggc catgacgatc aatgagccga tgaaaggcac cagatgaaac
     4501 agcgacagcg cgccggaaaa gcccgcccgc gtgcagatgc gccaggtcgg gatgatgaga
     4561 accagcgcca ccaggagatg cccgatcgca agcacgagca gcgccagcga gcccaaaccg
     4621 agaacccagg cgacgaaata ggtcatcgct tagacgagcg ccacgacttc gatctcgacc
     4681 agcacgtcgc gcggcaggcg cgccacctcg accgtcgagc gcgccggcgg aggagcgccg
     4741 aaatattccg gccggccgta gacctcgttc atggcgacga agctgtccat gttcttcagg
     4801 a
//
LOCUS       DASWGA010000289         3165 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1555359, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000289 DASWGA010000000
VERSION     DASWGA010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3165
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1555359"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            6..1496
                     /locus_tag="VF991_07030"
     CDS             6..1496
                     /locus_tag="VF991_07030"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX9556232.1"
                     /translation="MGLSAPVLQAVADKGYTEPTPIQEKAIPIVLMGRDVLGCAQTGT
                     GKTASFVLPMIDILAQGRAKSRMPRSLILEPTRELAAQVAENFEIYGKNHKLNMALLI
                     GGVSFPDQERALERGVDVLIATPGRLLDHIERGGILLNDVKILVIDEADRMLDMGFIP
                     DVERIVGLLPPLRQTLFFSATMPPEIKRLADRFLSNPKEVTVSPPASAAINIVQGLVV
                     VPEAAKREALLGLIKSQDVKNALVFCNRKRDVALLHPALKKHGVNAAALHGDMSQPAR
                     TETLERFRQGEIQILVASDVAARGLDIVDMSHVFNFDVPFSPEDYVHRIGRTGRAGKI
                     GHSFTLATPSEGDLVQAIEKLIGTTIPRIEIPGLDVAGFEASDGRRRGRGRGRPRGGA
                     ERSRAPREKAAHADKPAPEPRQEPQPEPRAEREHRPEQRAERPHRERRAEQRPDQRQE
                     HRQEHRTERHKPHPKERSERRPEGRDERAPVGLGDHVPAFLARSPR"
     gene            1521..1760
                     /locus_tag="VF991_07035"
     CDS             1521..1760
                     /locus_tag="VF991_07035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018063474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HEX9556233.1"
                     /translation="MQTIFIMVKCELGRAYEVADDACGVEQISEVYSTSGQYDLLMKC
                     YLDDKTDIGHFVTSKIQTLAGVRDTFTLITFKAFS"
     gene            1763..2383
                     /locus_tag="VF991_07040"
     CDS             1763..2383
                     /locus_tag="VF991_07040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556234.1"
                     /translation="MAGAGGKAALALWVDIDPADNSLFEHWHSREHMQERVGCPGWLR
                     GSRFRGVDHPGRYFLLYDAETTAAFESDVYYARLRNPSEMSRAILPKFRDTWRTVCTV
                     EQRWGDGIGAAALTLRMKAANTAPFDKLAALETVRVDLLAGQATVGQAHTAEKDLRPA
                     PDRQIERALVAFFWSVEAAQAARARHAPAAELFVLRHTVSKGDLPG"
     gene            complement(2412..>3165)
                     /locus_tag="VF991_07045"
     CDS             complement(2412..>3165)
                     /locus_tag="VF991_07045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_161597823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA hydrolase/transferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9556235.1"
                     /translation="DVPLLELAAPASAPEDEVIGRTIAGLVPDGACLQMGVGALPNLV
                     CAQLMNRNDLGIHTEALNQGLVDLVQAGVVTNRRKAINRGKTVFTFAMGQKAMYDFLN
                     ENPAVESGPVDYVNDPRIIAQNDTAISINATIQIDLTGACNSEHMLGHQYSASGGQLD
                     FVRGAYASKGGKSIIATRSTAAKGKVSRIVARLDGPVTTPRIDTHYLVTEFGAVNLKG
                     MGSAERAHALIGLAHPQFRDELTAAAKALHLI"
BASE COUNT          532 a         1072 c         1074 g          487 t
ORIGIN      
        1 agagtttggg gctgagcgcc ccggtactgc aagcagtcgc cgacaagggc tataccgagc
       61 ccaccccgat ccaggaaaag gccatcccca tcgtcctgat gggtcgcgat gtcctcggat
      121 gcgcccagac gggcaccgga aagaccgcct cctttgtcct gccgatgatc gacatcctgg
      181 cgcagggtcg cgccaaatcg cgcatgccgc gctcgctgat cctggagccg acgcgcgagc
      241 tggccgccca agtggccgaa aacttcgaaa tctacggcaa gaaccacaag ctgaacatgg
      301 cgctgctgat cggcggcgtg agcttccccg atcaggagcg cgcgctggaa cgtggcgtcg
      361 acgtgctgat cgccaccccc ggccgcctgc ttgaccacat cgagcgcggc ggcatcctgt
      421 tgaacgacgt caagatcctg gtgatcgacg aagccgaccg catgctcgac atgggcttca
      481 tccctgacgt cgagcgcatt gtcggcctgc tgccgccgct caggcagacg ctgttcttct
      541 cggccaccat gccgcccgag atcaagcggt tggccgatcg cttcctgagc aaccccaagg
      601 aagtgacggt ctcgccgccg gcctcggccg ccatcaacat cgtccagggc ctggtcgtgg
      661 tgccggaggc ggcgaagcgc gaggcgctgc tcggactgat caagagccag gacgtcaaga
      721 acgccctggt attctgcaac cgcaagcgcg acgtggcgct gcttcatcct gcgctgaaga
      781 agcacggcgt caacgccgct gcgctgcacg gcgacatgag ccagccggcg cgcacggaga
      841 ccttggagcg cttcaggcag ggcgagatcc agatcctggt ggcgtccgac gtcgccgccc
      901 gcggcctcga catcgtcgac atgagccacg tcttcaattt cgacgtgccg ttctcgcccg
      961 aggactacgt ccatcgcatc ggccgcaccg gccgcgccgg caagatcggc cactccttca
     1021 ccctggcgac cccctccgag ggcgacctcg tccaggcgat cgaaaagctg atcggcacga
     1081 ccattccccg catcgagatc cccggtctcg acgtcgcggg cttcgaggcg tccgacggcc
     1141 gccgtcgcgg tcgtggccgc ggtcgtccgc gcggcggtgc cgagagatcg cgtgcacccc
     1201 gcgagaaggc ggcgcatgca gacaagccgg cgccagagcc gcggcaagag ccgcagccgg
     1261 aaccccgcgc ggagcgcgag catcggccgg aacagagagc ggaacggccg caccgcgagc
     1321 gccgggcgga gcagcggcca gatcagcggc aagagcaccg gcaagagcac cggacagagc
     1381 gtcacaagcc gcacccgaag gagcgcagcg agcgccggcc tgagggccgc gacgagcgcg
     1441 cgccggtcgg actgggcgat catgtccccg cttttctcgc ccgttcgccg cgttgaagtc
     1501 ggccccccgc ggaggggacc atgcagacga tcttcatcat ggtgaagtgc gagctcggca
     1561 gggcctacga ggtcgccgac gatgcgtgcg gcgtcgagca gatatcggag gtctattcga
     1621 cctccggcca gtacgacctc ctgatgaagt gctatctcga cgacaagacc gacatcggtc
     1681 atttcgtcac cagcaagatc cagacgctgg ccggcgtgag ggacaccttc accttgatca
     1741 ccttcaaagc cttcagctga ccgtggccgg cgccggcggc aaggcggcgc tggcgctatg
     1801 ggtcgacatc gatccggccg acaattccct gttcgagcac tggcacagtc gcgagcacat
     1861 gcaggaaagg gtcggctgcc cgggctggct gcgcggcagc cgcttcaggg gcgtcgatca
     1921 tcccggccga tatttcctgt tgtacgacgc cgaaacgacc gccgcgtttg aaagcgacgt
     1981 ctactacgcc cgcctgcgca atccgtccga gatgagccgc gccatcttgc cgaaattccg
     2041 cgacacctgg cgcaccgtct gcacggtcga gcagcgctgg ggcgacggca tcggcgcggc
     2101 ggcccttacg ctcaggatga aggcggccaa caccgcgccc ttcgacaagc tggcggcgct
     2161 ggagaccgtg cgtgtcgacc tgctcgccgg ccaggcgact gtcggccagg cgcacaccgc
     2221 ggaaaaggac ctgcgccctg cgccggaccg tcagatcgag cgggcgctgg tcgccttctt
     2281 ctggtcggtc gaggcggcgc aagcggcgcg ggcgcggcac gcgccggcgg cggagctctt
     2341 cgtgctgcgg cacaccgtgt cgaagggcga ccttcccgga tagttgatcg gcgccgggcg
     2401 ccgatcgtcg ttcaaatcag gtgcaaggcc ttggccgccg ccgtgagctc gtcgcggaac
     2461 tggggatggg ccaggccgat cagcgcatgg gcgcgctcgg ccgagcccat gcccttgagg
     2521 ttcactgcgc cgaactcggt gacgaggtag tgggtgtcga tgcgcggcgt agtgactggc
     2581 ccgtcgagcc gcgccacgat gcgcgagacc ttgcccttgg cggccgtcga gcgcgtggcg
     2641 atgatcgact tgccgccctt cgaggcgtag gcgccgcgca cgaagtcgag ctggccgccc
     2701 gaggcgctgt actggtggcc cagcatgtgc tcggagttgc aggcgcccgt caggtcgatc
     2761 tggatggtgg cgttgatcga gatcgccgtg tcgttctgcg cgatgatgcg cgggtcgttg
     2821 acgtaatcga ccgggccgct ctcgacggcg ggattctcgt tcaagaagtc gtacatcgcc
     2881 ttctgcccca tggcgaaggt gaagacggtc ttgccgcggt tgatcgcctt gcgccggttg
     2941 gtgaccacgc cggcctggac gaggtcgacc agcccctggt tcaaggcctc ggtatgaatc
     3001 ccgagatcgt tgcgattcat gagctgggcg cagaccaggt tgggcagggc gccgacgccc
     3061 atctgcaggc aggccccgtc gggcaccagg ccggcgatgg tgcggccgat cacctcgtct
     3121 tcgggcgcgg acgccggggc tgccagctcc agcaacggca cgtcg
//
LOCUS       DASWGA010000290         5505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_415421, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000290 DASWGA010000000
VERSION     DASWGA010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5505
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415421"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..781)
                     /locus_tag="VF991_07050"
     CDS             complement(<1..781)
                     /locus_tag="VF991_07050"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9556236.1"
                     /translation="MPGVLEGIRVLDFGRYIAGPFCGTMLGDLGAEVIRIEKLDGSED
                     RWVTPVAQGGEGAIFLQMGRNKLGLTLNPMKPAGREIVKKLLAVSDVVIANLPYETLQ
                     DMGIDYETISAINPRIILATTSTFGSEGPYATRVGFDTIGQAMSGAMFLSGDGKVPTR
                     MNAPYVDFGTALLNTVGVLAALMDRAKSGKGQKVETALLRTAINITNGHLIEQAMLNL
                     NRIATLNRGFTAGPSDTFKCSDGWIYAMTIGQPLFARWCKLM"
     gene            complement(965..1312)
                     /locus_tag="VF991_07055"
     CDS             complement(965..1312)
                     /locus_tag="VF991_07055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9556237.1"
                     /translation="MNVETLAPDSTYVDIASMPWQPTRFPGIDCKILMENKATGMSTM
                     LMRWAPGARLPQHEHVAIEQTFVLEGSFADHDGVCRAGNYVWRRAGSRHDAWTDEGCL
                     VLAFFLKPNTFFD"
     gene            complement(1309..2280)
                     /locus_tag="VF991_07060"
     CDS             complement(1309..2280)
                     /locus_tag="VF991_07060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HEX9556238.1"
                     /translation="MSDLPKRVLIDEEGPREGFQSEKKMIPVADKVRLIEALADTGLR
                     RIACVSYVNPKRVPTMADAEEVAARINRKPGIQYSALWLNQQGLERALRGPLHVDGGV
                     RITASDTFSRKNIGKSVPDALIEQRLSLKTFKDRGMPVEWGVVLGAFGCNYEGELSTE
                     LILQRVQSVLDEAELAGFTLKGIKLTDAMGWATPQSVERLIGAIRSKWPALEIALHLH
                     DTRGTGMASAYAGLRLGVTKFDASIAGLGGCPFAATDGAAGNICTEDFAFLCEEMGVA
                     TGLDIDRLIEVAQLAEEVVGRALPGHVMRGGTLKAAKQKAAGQRVAA"
     gene            complement(2300..3805)
                     /locus_tag="VF991_07065"
     CDS             complement(2300..3805)
                     /locus_tag="VF991_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010974586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX9556239.1"
                     /translation="MDLLDNLTLGMTVALSFQNLLYALIGCMVGTLIGVLPGIGPVAT
                     IAMLLPITFHLPPTASLIMLAGIYYGAQYGGSTTSILVNLPGEASSVVTCIDGYQMAR
                     QGRAGAALSISALGSFFAGTVGTIIIVLFAEPLTRMAQKFGPADYCSLMALGLVAAVV
                     LANGSVLKAIAMVFLGLLFGLVGTDVNTGAQRFTFDIPELSDGIDFAPIAMGLFGIAE
                     IVVNLERRMSRSGAIKVGSLWPTREEARRAWPAVVRGTALGSILGVLPGGGPTLGAFS
                     AYTLEKKISKTPERFGKGAVEGVAAPEAANNAAAQTSFIPMLTLGIPSNAVMALMVGA
                     MIIQGIQPGPEVMTKKPDLFWGMIASMWVGNLMLVVINLPMIGMWVKLLTVPYRFLAP
                     AILLFCCVGAYSLQNSTFHVLQVAMFGVLGYIFVRLGCEGAPFLLGLVLGPQMEEYFR
                     RAMLLSRGDPMVFLERPISLGLLITTALLLILMALPSINKARQEAFQEEET"
     gene            complement(3807..4487)
                     /locus_tag="VF991_07070"
     CDS             complement(3807..4487)
                     /locus_tag="VF991_07070"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX9556240.1"
                     /translation="MSRFLSKDFLSGVMFIAFGLTAMYFGGHLALGTPVRMGPGYVPH
                     KLACIMLFLGGIISLVPLFLTARRTEKEAIWIPVGVASVLFIPAVHYLTPLYASPPPW
                     LAQLAGDWFQLIATAELVALFLLCVLISALGTMRADPGTEVDLVEAPKWKPITMVTIG
                     IVAFALLFESTGLIPALVALILISSLGGDEFKLVEVIGNMVVLTILCILVFKVGLSMN
                     IYVLRGVW"
     gene            complement(4599..5174)
                     /locus_tag="VF991_07075"
                     /pseudo
     CDS             complement(4599..5174)
                     /locus_tag="VF991_07075"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
BASE COUNT         1037 a         1794 c         1829 g          845 t
ORIGIN      
        1 ccatcagctt gcaccagcgc gcgaacagcg gctggccgat ggtcatggca tagatccagc
       61 cgtcgctgca cttgaaggta tcggacggcc cggcggtgaa gccgcggttg agcgtggcga
      121 tgcggttgag gttgagcatc gcctgctcga tcagatggcc gttggtgatg ttgatggcgg
      181 tgcgcagaag cgcggtctcg accttctggc ccttgccgct cttggcgcgg tccatcaggg
      241 cggccagcac gcccaccgtg ttgagcagcg ccgtgccgaa atcgacgtag ggcgcattca
      301 tgcgcgtcgg caccttgccg tcgcccgaca ggaacatggc gcccgacatc gcctggccga
      361 tcgtgtcgaa gccgacgcgc gtggcgtagg gcccttccga gccgaaggtc gaggtggtgg
      421 cgaggatgat gcgcgggttg atggccgaga tggtctcgta atcgatgccc atgtcctgca
      481 gcgtctcgta gggcaggttg gcgatcacca cgtccgacac ggccaaaagc ttcttcacga
      541 tctcccggcc ggccggcttc atcgggttca gcgtgagccc gagcttgttg cggcccatct
      601 ggaggaatat cgcgccttcg ccgccctggg cgaccggcgt cacccagcgg tcctcgctgc
      661 cgtcgagctt ctcgatgcgg atcacctcgg cgccgagatc gcccagcatc gtgccgcaga
      721 acgggccggc gatgtagcgg ccgaaatcga gaacgcgtat tccttcgaga accccgggca
      781 tcggttgttt cacctcaaag ttagctttcg caaaatcagg ctcctctccc ccgctagggg
      841 gagaggttgg gtgaggggga tgcgcacgtc gttacccccc ctcacctagc ctctccccct
      901 agcgggggag aggaatttga ggtgtgccga cgccgtagca gcgcagccgg agaggcaacg
      961 actatcaatc gaagaaagtg ttgggcttca ggaagaaggc cagcaccagg cagccctcgt
     1021 ccgtccacgc atcgtgacgg ctgccggcgc gacgccacac gtagttgccg gcgcggcaca
     1081 cgccgtcgtg gtcggcgaac gagccttcga gcacgaaggt ctgctcgatg gcgacatgct
     1141 cgtgctgcgg cagccgcgcg cccggcgccc agcgcatcag catggtcgac atgccggtcg
     1201 ccttgttctc catcaggatc ttgcagtcga tcccggggaa gcgcgtcggc tgccacggca
     1261 tcgacgcgat atcgacgtag gtcgagtcgg gagcgagagt ttcgacgttc atgcggcgac
     1321 cctctgtccg gcggcctttt gtttggccgc cttgagcgtg ccgccgcgca tgacgtggcc
     1381 gggcagggcg cgccccacga cctcctcggc gagctgggcg acctcgatca ggcggtcgat
     1441 gtcgagcccg gtcgccacgc ccatctcctc gcacaggaag gcgaaatcct cggtgcagat
     1501 gttgccggcc gcgccgtcgg tcgccgcgaa cgggcagccg cccaggccgg cgatcgaggc
     1561 gtcgaacttg gtgacgccca ggcgcaggcc ggcataggcg ctggccatgc cggtgccgcg
     1621 ggtgtcgtgc aggtgcagcg cgatctcgag cgcgggccac ttcgagcgga tggcgccgat
     1681 cagccgttcg acggattgcg gcgtcgccca gcccatggcg tcggtgagct tgatgccctt
     1741 gagcgtgaag cccgccagct cggcctcgtc gagcaccgac tggacgcgct gcaggatcag
     1801 ctcggtggag agctcgccct cgtagttgca gccgaaggcg cccagcacga cgccccattc
     1861 gacgggcatg ccgcggtcct tgaaggtttt tagcgacagg cgctgctcga tcagagcgtc
     1921 cggcaccgac ttgccgatgt tcttgcgcga gaaagtatcc gaggcggtaa tgcggacgcc
     1981 gccgtcgacg tggagcgggc cgcgcagcgc gcgctcgaga ccctgctggt tgagccacaa
     2041 ggcgctgtac tggatgccgg gcttgcgatt gatcctggcc gccacttcct cggcatcggc
     2101 catggttggc acgcgcttgg ggttgacgta cgagacgcag gcaatgcgcc tgagcccggt
     2161 gtccgccagc gcctcgatca ggcgcacctt gtcggccacc gggatcatct tcttctccga
     2221 ctggaagccc tctcgagggc cttcctcgtc gatcagcacg cgcttgggca ggtcggacat
     2281 gacaggactc cttcgggcgt caggtctctt cttcctggaa cgcttcctgc cttgccttgt
     2341 tgatgctggg caaggccatc aaaatcagca gcagagcggt cgtgatcagc aggccgaggc
     2401 tgatcggccg ctcgaggaac accatcggat cgccgcgcga cagcagcatg gcccgccgga
     2461 agtactcctc catctgcggt ccgagcacga ggccgagcag gaacggcgcg ccttcgcagc
     2521 ccaggcggac gaagatgtag cccagcacgc cgaacatggc gacctgcaag acgtggaacg
     2581 tgctgttctg caggctgtag gcgccgacgc agcagaacag caggatggcc ggggcgagga
     2641 agcggtaggg caccgtcaag agcttcaccc acatgccgat catcggcagg ttgatgacca
     2701 ccagcatcag gttgccgacc cacatcgagg cgatcatgcc ccagaacaga tcgggcttct
     2761 tggtcatgac ctcgggaccg ggctggatgc cctggatgat catggcgccc accatcagcg
     2821 ccatgacggc gttcgatgga atgccgagcg tcagcatggg aatgaacgaa gtctgtgccg
     2881 cggcattgtt ggcggcttcc ggcgccgcca cgccctcgac cgcgcccttg ccgaatcgct
     2941 cgggggtctt ggagatcttc ttctccaggg tataggccga gaaggcgccg agcgtcgggc
     3001 cgccgcccgg cagcacgccc aggatcgacc ccagcgccgt gccgcggacg acggccggcc
     3061 acgctcgccg ggcctcctcg cgggtgggcc agagcgaacc caccttgatc gccccggatc
     3121 tcgacattcg ccgctcgagg ttgacgacga tctcggcgat gccgaacagg cccatggcga
     3181 tcggcgcgaa gtcgatgccg tcgctgagtt cggggatgtc gaaggtgaag cgctgggcgc
     3241 cggtgttgac gtcggtgccg accagtccga acagcaggcc caggaacacc atggcgatgg
     3301 ccttgagcac cgagccgttg gccaggacca cggcggcgac gagacccagc gccatcagcg
     3361 agcaatagtc ggcgggcccg aatttctgcg ccatgcgcgt cagcggctcg gcgaacagca
     3421 cgatgatgat cgtgccgacc gtgccggcaa agaacgagcc caacgccgag atcgacagcg
     3481 cggcgccggc gcggccctgg cgggccatct ggtagccgtc gatgcaggtg accaccgacg
     3541 acgcctcgcc cggcaggttg accaggatcg acgtcgtcga gccgccgtac tgcgcgccgt
     3601 agtagatgcc ggccagcatg atcagcgaag ccgtcggcgg cagatggaag gtgatcggca
     3661 gcagcatggc gatggtcgcc acgggaccga tcccgggcag cacgccgatc agcgttccga
     3721 ccatgcagcc gatgagggca tagagcaggt tctggaacga cagcgcgacc gtcatcccga
     3781 gggtgagatt gtcgagcagg tccatctcac caaactccgc ggagcacgta aatattcatg
     3841 ctgagaccca ccttgaagac gaggatgcag aggatcgtca gcaccaccat gttgccgatg
     3901 acttcgacca gcttgaattc gtcgcccccc agcgaggaga tcaggatcag cgcgaccagt
     3961 gccgggatca ggccggtcga ctcgaacagc agcgcaaaag cgacgatgcc gatcgtcacc
     4021 atggtgatcg gcttccattt cggcgcttcg accaggtcga cctccgtccc cgggtcggcg
     4081 cgcatcgtgc ccaatgcgct gatcagaacg cacagtagga acagcgccac cagttccgcg
     4141 gtcgcgatca actggaacca gtcgccggcc aactgggcca accatggcgg cggcgatgca
     4201 tacagcggcg tcaggtaatg gaccgccggg ataaacaaga cggacgccac gccgaccgga
     4261 atccagatcg cttccttttc cgtccgcctg gcggtcaaga agagcggcac caggctgatg
     4321 atgccgccca ggaagagcat gatgcaggcg agcttgtggg gcacgtagcc cggtcccatg
     4381 cggaccggcg tgcccaacgc caaatggcct ccgaagtaca tagccgtcag cccgaaggcg
     4441 atgaacatca ccccggacaa gaagtccttg ctcaggaatc gactcaacga tgcctcccca
     4501 acgcaaaccc cgtcttctgt cggatattgg gcccgaatcc ccggaccggc acaacggcca
     4561 gctaaacacg aatccgccgc tttgcccaag cgccaagttc acggccgaag tagcaggcgg
     4621 acggcgatga cggcaaggca aagagcgaac aatcggcgca gcagcgcgac cggagcgcgc
     4681 gccgaccagc gcgccgccag cggcgcgaca aagagcgcgg gcagcgacag cgccgccacg
     4741 caaaacagcg ccacatcgcc cagcgcatcg accggtcggc cgggcgcgcc gaggtcatgg
     4801 gtcaggaaga acgctgccgc cggcagagcg atcaccaggt tgaacacggc accggcgccg
     4861 atcgcctgct tgatcggaaa ggagaagagc gacagcacgg gcgtgctcaa cgttccaccg
     4921 gccacgccaa ccgccgacgc aagtgcgccc acgatcgcgg gcgacagctg accgagaagt
     4981 cctttgagga gcgcgccggt gaatgccaac cgctcgccca ggaccatctt gacggcaagc
     5041 gccacggcga tgccggcgag cagacgaatg agcagcttcg caggtgcgaa cgcgctcaag
     5101 gccaagccca gcacggtgcc taacaacggg gcaggcagcc aggcccgaac aagaggaccg
     5161 tcgatggtgc cggcccgcca atgcgctgat caccccgccg ccgacgccga gaagtccggc
     5221 caacaggccg atcaatatgc cggcgccggg caaaaggatc gaaatgacgg gcggataggc
     5281 cgagtctctg ccacgcgaac tcccccctgg gtcctacccg ttggtcgata ttgcatgggc
     5341 ctccatgggc gagcaaactc ccggccaaag tgaatgatca ttcaggggct gcgggtggcg
     5401 cgacgagggg cggactatat cggcacgatg gcggtgcagg agaagcatcg tttcgacgaa
     5461 cggtcgctcg agcggttcat gtcggcgcat atcgacggtt tcgtg
//
LOCUS       DASWGA010000291         1952 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1297195, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000291 DASWGA010000000
VERSION     DASWGA010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297195"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VF991_07080"
     CDS             <1..246
                     /locus_tag="VF991_07080"
                     /inference="COORDINATES: protein motif:HMM:NF040443.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6489 family protein"
                     /protein_id="HEX9556241.1"
                     /translation="VEVSCTPEEARAFFGLPDIKPMQDRIMGEIEERLRSSLGAMNPE
                     TVFKTWLPASMQGMEQMQQMQQAFWSQLANIATGKKD"
     gene            254..628
                     /locus_tag="VF991_07085"
     CDS             254..628
                     /locus_tag="VF991_07085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S) ferredoxin domain-containing protein"
                     /protein_id="HEX9556242.1"
                     /translation="MSQREKPSDPKLYYEAHVFCCTNRRPAGHPRGCCAEKGSEALRD
                     YMKGRAKDLGLKKVRINSAGCLDRCELGPSVLIYPEGVWYSCATKEDIDEVLQKHLVE
                     GGRVERLMLQTADKLPADRAKR"
     gene            complement(724..1443)
                     /locus_tag="VF991_07090"
     CDS             complement(724..1443)
                     /locus_tag="VF991_07090"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX9556243.1"
                     /translation="MSLPRAILFDLDDTLIRAYAQPVDAWRRLLTVFAAHLDAHDAPS
                     IERVRAAVMEEARAFWSDTAIAAKWRLDIPGARRLSVRRGLERLGKTDEALADRIADA
                     FTKMRRDEYKLYPDAHATVDALRQAGVKLALVTNGAAATQRDKIARFELGHRFDHIQI
                     EGEFGQGKPELAVYRHALEKLGCDACDAWMVGDNYEWEVVAPQRLGMCGIWYDPFDAG
                     VPAHATAKPTRIIKRLAELVE"
     gene            complement(1463..>1952)
                     /locus_tag="VF991_07095"
     CDS             complement(1463..>1952)
                     /locus_tag="VF991_07095"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556244.1"
                     /translation="KGDGKFAILVPVAPPRLSTALAALAAAGLDNKAAQFIGTGVWDV
                     PNVGSDAMARGAWYAAPDPARRADFERRFLATYGRPPNRLATLAYDAVALAGNLARLK
                     PGGDFSAEAITNPNGWSGVDGVFRFLPDGRSERALAVIEVQSNRGVVISPAPTTFARP
                     TF"
BASE COUNT          337 a          635 c          683 g          297 t
ORIGIN      
        1 gtcgaggtaa gctgcacgcc ggaggaggcg cgcgcctttt tcggcctgcc ggacatcaag
       61 ccgatgcagg atcgcatcat gggcgagatc gaggagcggc tacgctccag cctcggcgcc
      121 atgaaccccg agacggtgtt caagacctgg ctgccggcct ccatgcaggg catggaacaa
      181 atgcagcaga tgcagcaggc cttctggtcg cagctcgcta atatcgccac cggcaagaag
      241 gattgacacg gcaatgagcc agcgtgaaaa gccgtccgat cccaagctct actacgaagc
      301 ccacgtcttc tgctgcacca accgccggcc ggccggccat ccgcgcgggt gttgcgcgga
      361 aaagggctcg gaagccctgc gcgattacat gaaaggccgc gccaaggacc ttggcctcaa
      421 gaaagtgcgc atcaacagcg ccggctgcct tgaccgctgc gagctgggcc cgagcgtgct
      481 gatttatccc gagggcgtct ggtattcctg cgcgaccaag gaagacatcg acgaggtgct
      541 ccagaagcac ctggtcgaag gcgggcgggt cgagcgtctg atgctgcaga cggcggacaa
      601 gctgccggcc gatcgcgcca agcggtaggt ctttgctggg agcgcgccac tccgtggcgc
      661 gtctttgtcg atcacacagc tcatgagcgc cacggagtgg cgcgctccca gccatgagga
      721 agactattcg accaactccg ccagccgctt gatgatccgc gtcggcttgg cggtcgcgtg
      781 cgccggcacg ccggcatcga aggggtcgta ccagatgccg cacatgccca gccgctgcgg
      841 cgccacgact tcccattcgt aattgtcgcc gaccatccag gcatcgcaag catcgcagcc
      901 gagcttctcc agtgcatggc gatagaccgc gagctcgggc ttgccctggc cgaactcgcc
      961 ttcgatctgg atatggtcga agcgatggcc gagctcgaag cgcgcgatct tgtcgcgctg
     1021 cgtcgcggcc gcgccgttgg tgaccagggc cagcttgacg ccggcctggc gcaaggcgtc
     1081 gacggtggcg tgggcgtcgg gatagagttt gtattcgtcg cgccgcattt tcgtgaaggc
     1141 gtcggcgatg cgatcggcca gcgcctcgtc ggtcttgccc agccgctcca gtccacggcg
     1201 caccgacagc cgccgcgcgc cgggaatgtc gagccgccac ttggcggcga tggccgtatc
     1261 ggaccagaag gcgcgcgcct cctccatcac cgccgcgcgc acgcgctcga tcgacggcgc
     1321 gtcgtgcgcg tccaagtggg cggcgaatac ggtgagcagg cgccgccagg catccactgg
     1381 ctgggcgtag gcgcggatca gcgtgtcgtc gagatcgaac aggatggcgc ggggcagcga
     1441 catgtcggtc aggaggcgtt gcctagaaag tgggccgcgc gaaggtggtc ggcgcgggac
     1501 tgatgaccac gccgcgattg ctttgcacct cgatcaccgc cagcgcccgt tccgagcggc
     1561 cgtcgggcag gaagcggaag acgccgtcga cgccagacca gccgttgggg ttggtgatcg
     1621 cctcggccga gaaatcgccg cccggcttga ggcgggcgag attgccggcg agcgccacgg
     1681 cgtcataggc aagcgtcgcc agccggttgg gcgggcggcc gtaggttgca agaaagcgcc
     1741 gttcgaagtc ggcgcgccgc gccggatcgg gcgcggcata ccaggcgccg cgcgccatcg
     1801 catcggagcc gacattgggc acatcccaca cgccggtgcc gatgaactgg gcggccttgt
     1861 tgtcgaggcc ggcggcggcc agcgcggcca gggcggtcga caggcgaggc ggggccaccg
     1921 gcaccaggat ggcaaacttg ccatcgccct tg
//
LOCUS       DASWGA010000292         3097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_39503, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000292 DASWGA010000000
VERSION     DASWGA010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39503"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..1095
                     /locus_tag="VF991_07100"
     CDS             40..1095
                     /locus_tag="VF991_07100"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: protein motif:HMM:NF006058.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008838 - diaminopropionate ammonia-lyase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HEX9556245.1"
                     /translation="MKVNVEVSCTPEEARAFFGLPDIKPMQDRIMGEIRVKDESQRFG
                     FGAFKALGGVLAVYSELSGAIGKACSFAEIMDGAHRQITARFTFATASSGNHGRSVAA
                     GAKLFGARCVVFLPKFTSAEKEAAIRARGAEVVRVDGDYDEAVAACRRTSEQSGWTII
                     SDTSWEGYESVPRNVMRGYCVLVDEAVVQLGQAPTHVFVQAGVGGLAAAVIGYLWAVL
                     PERPTFIVVEPRSADCWFQSNQAGKPAPASGNADTAMGGLACREISPVTWPIVGEGAD
                     WFMTIEEDEVMPARRLFAHPTGTDPAIASGPSGCAGLAGLLRVCSDEAAAKALKLDGQ
                     SRVLLINSEGNLGEQPA"
     gene            1092..>3097
                     /locus_tag="VF991_07105"
     CDS             1092..>3097
                     /locus_tag="VF991_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX9556246.1"
                     /translation="MNRLSAETSPYLLQHANNPVHWWAWGEAALAEAKRSNRPILLSV
                     GYAACHWCHVMAHESFESPEVAAVMNELFVNIKVDREERPDVDAIYMQALHVLGEQGG
                     WPLTMFCTPAGEPFWGGTYFPYPARYGRPSFVDVLQGVAQAWRDKPQDIETNRAGLLR
                     ALQQKAANKAVEVKGDGPLIPVGLLDQIDNRVVQECDPVWGGLGQAPKFPSPYLFENL
                     WRGWLRDRANRRLFDAVTVTLDRMCQGGIYDHLGGGFARYATDPEWLIPHFEKMLYDN
                     AQLIDLLTLVWQESKSPLYATRIAETCDWVLREMVAESGGFAATYDADSEGVEGKFYV
                     WDEAEIDTLLGPDDATFFKRVYDVTSAGNWEHHTILHRNRSPALLSEDEERRLAGLRA
                     KLKAVRDKRVWPGWDDKVLADWNGLMIAALANAAAVFQRDDWLAAAVRAWRFVMDAMR
                     DANGRLFHSHRAGKRLHRGTLDDYANMARAGLALFETTGETRYIDEARSLVAVLDRYF
                     ADADAYFITADDAADLIVRNKHSHDNAVPPGNATLVGVFARLWVLTGEQAWRDKADRQ
                     VAAFAGELESNFFPLMTLLNNYELLQSATELVIVGDPEQSASETLRRAVYAKSLPNKI
                     VRRLAPDVSLPSAHPAAGKGLVGGKPALYVCRNMTCQPPVTDPAA"
BASE COUNT          525 a         1035 c         1031 g          506 t
ORIGIN      
        1 gcccgagatc gcctaagctg gcgcagaacg gagagactca tgaaggtgaa cgtcgaggta
       61 agctgcacgc cggaggaggc gcgcgccttt ttcggcctgc cggacatcaa gccgatgcag
      121 gatcgcatca tgggcgagat ccgcgtcaag gacgagagcc agcgcttcgg attcggcgcc
      181 ttcaaggcgc tgggcggggt cttggccgtc tacagcgagc tttccggcgc gatcggcaag
      241 gcctgctcat tcgccgagat catggacggc gcccatcgcc agatcaccgc gcgcttcacc
      301 tttgccaccg cgagctcggg caaccatggc cgctcggtcg ccgccggcgc caagctgttc
      361 ggcgcccgct gtgtcgtgtt cctgccgaaa ttcacatcgg ccgagaagga agcggcaatc
      421 cgggcccgcg gcgccgaggt ggtccgcgtc gacggcgact acgacgaagc ggttgccgcg
      481 tgccggcgca cgtcggagca aagcggctgg accatcattt ccgacacctc gtgggagggc
      541 tacgaatcgg tgccgcgcaa cgtcatgcgc ggctactgcg tgctcgtcga cgaggcggtc
      601 gtccagctcg ggcaggcgcc cacccacgtc ttcgtgcagg cgggcgtggg cgggcttgcc
      661 gccgccgtga tcggctattt gtgggccgtg ttgcccgagc gaccgacttt catcgtcgtc
      721 gagcccagga gcgctgattg ctggttccag agcaaccaag cgggcaagcc cgcgccggcc
      781 agcggcaatg ccgacacggc catgggcggc ctcgcctgtc gcgagatctc gccggtgacc
      841 tggccgatcg tcggcgaggg ggccgactgg ttcatgacca tcgaggagga cgaggtgatg
      901 ccggcgcggc gcctgttcgc tcatccgacg ggcaccgacc ctgccatcgc gtcaggaccg
      961 tcgggctgcg ccggcctggc cggtctttta cgcgtttgca gcgacgaagc cgccgccaag
     1021 gcgttgaaac tcgacgggca gtcgcgcgtt ctgctcatca acagcgaagg caatctcgga
     1081 gagcagccgg catgaatcgc ttgagcgccg agaccagtcc ttacctactg cagcacgcca
     1141 acaaccccgt gcattggtgg gcgtggggcg aagcggcgct cgccgaggcc aagcgcagca
     1201 accggccgat cctgctctcg gtcggctacg ccgcctgtca ttggtgccat gtcatggcgc
     1261 acgagagctt cgaatcgcct gaggtggccg cggtgatgaa cgagctgttc gtcaacatca
     1321 aggtcgaccg cgaggagcgt cccgacgtcg atgccatcta catgcaggcc ctgcacgtcc
     1381 tgggcgagca gggcggctgg ccgctcacca tgttctgcac gccggcgggc gagccgttct
     1441 ggggcggcac ttattttccc tatcctgccc gctacggccg gccgagcttc gtcgacgtgc
     1501 tgcagggcgt ggcgcaggcc tggcgcgaca aaccacagga tatcgagacc aaccgcgccg
     1561 gactgttgcg ggcgctgcag cagaaagccg ccaacaaggc ggtcgaggtc aagggcgacg
     1621 gtccgttgat tcccgtgggg ctgctcgacc agatcgacaa ccgtgtcgtc caggaatgcg
     1681 atcccgtctg gggcgggctg ggccaggctc cgaaattccc gtcgccttat ctgtttgaga
     1741 atttgtggcg cggctggctg cgcgatcgcg ccaaccggcg gctgttcgac gcggtgaccg
     1801 tcacgctgga ccgcatgtgc cagggcggca tctatgatca cctgggcggc ggcttcgcgc
     1861 gctacgccac cgatcccgaa tggctgatcc cgcacttcga gaagatgctt tacgacaatg
     1921 cgcagctcat cgacctgctg acgctggtct ggcaggagag caagagcccg ttgtacgcca
     1981 cgcgcatcgc cgaaacctgc gactgggtgc tgcgcgaaat ggtggccgag agcggcggct
     2041 tcgctgcgac ctacgacgcc gacagcgaag gcgtcgaggg caagttctac gtttgggacg
     2101 aggccgagat cgacaccctc ctggggcccg acgacgcgac cttcttcaag cgcgtctacg
     2161 acgttacctc ggcgggtaac tgggaacatc acaccatcct gcaccgcaac cgatcgccgg
     2221 cgttgctcag cgaggacgag gagcggcggc tagcaggcct gcgcgccaag ttgaaggccg
     2281 tacgcgacaa gcgcgtgtgg ccgggctggg acgacaaggt tttggccgac tggaacggcc
     2341 tcatgatcgc ggcccttgcc aatgccgccg ctgtctttca gcgcgacgac tggctcgccg
     2401 cggcggtgcg cgcctggcgc ttcgtgatgg acgccatgcg cgacgcgaac ggccggctgt
     2461 tccattccca tcgtgccggc aagcggctgc atcgcggcac gctcgacgac tacgccaaca
     2521 tggcgcgcgc cggtctcgcc ctgttcgaga cgacaggcga gacgcgctac atcgacgaag
     2581 ccaggtccct ggtcgcggtc ctcgaccgct acttcgccga cgccgacgcc tacttcatca
     2641 cggccgacga tgccgccgac ctgatcgtgc gcaacaagca cagccacgac aacgccgtgc
     2701 cgccgggcaa cgccaccttg gtcggcgttt tcgcccgcct gtgggtgttg accggtgagc
     2761 aggcctggcg cgacaaagcc gaccggcaag tcgcggcctt tgccggcgag ctcgagagca
     2821 atttcttccc gctgatgacg ctcctgaaca actacgagct gctgcaatcc gcgaccgagc
     2881 tggtgattgt aggcgatccc gagcaatccg cgagcgagac gctgcgccgc gccgtctacg
     2941 ccaaaagcct gcccaacaag atcgtacgcc gccttgcgcc cgatgtttcg ttgccaagtg
     3001 cccatccggc agccgggaaa ggtctggtcg gcggcaaacc ggccctctac gtttgccgca
     3061 acatgacctg ccagccgccg gtcaccgatc cggcggc
//
LOCUS       DASWGA010000293         5953 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_790788, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000293 DASWGA010000000
VERSION     DASWGA010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5953
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_790788"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VF991_07110"
     CDS             <1..511
                     /locus_tag="VF991_07110"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047689 - aspartate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HEX9556247.1"
                     /translation="ADKLAKIGADFLICPDNTIHQALPHVLARSPLPWLHIAEVVAAE
                     ALARGFRRIGIIGTKWLVDSEVYPEKFSARGLEYVRPSADERDECNRIIMDELVCSVF
                     KPESVAYCQRVIGRFKDQGCDAVVLGCTELPLIINDGNSALPTLDSTRLLARAALKRA
                     VHAHADGRS"
     gene            complement(506..2875)
                     /gene="lon"
                     /locus_tag="VF991_07115"
                     /pseudo
     CDS             complement(506..2875)
                     /gene="lon"
                     /locus_tag="VF991_07115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596882.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
     gene            complement(2899..3294)
                     /locus_tag="VF991_07120"
                     /pseudo
     CDS             complement(2899..3294)
                     /locus_tag="VF991_07120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821688.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
     gene            complement(3342..4634)
                     /locus_tag="VF991_07125"
     CDS             complement(3342..4634)
                     /locus_tag="VF991_07125"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9556248.1"
                     /translation="MSLIRPAACAALAVVLALPAAAQGIPKAASPEEVGFLSTRLKRL
                     SDRINEGVKNNELPGAVVLIARNGKLVMFDSFGFRDREAKAPMTNDTIFRIASMTKPI
                     VSVAAMMLVEEGKLSLADPVSRYIPAFADTKVAVSKKKDDGTVEIALEPQTRAMTVQD
                     LMRHTSGLTYGTAGTNPVKQSYLDMKVADRSQTLAEMADKLAKLALLYQPGTTWEYSM
                     STDLLGRVVEVASGLPLDKFIEERITKPLKMGDTAFEVGADKKARGARPMKEGPKNEM
                     PSVPEVTEKFTWRSGGGGMVSTAADYARFLQMFANGGQLDGVRLISRKTIDLMTADAL
                     PPDIKMGEDMWRFEALEPSARMGQGFGLGFAVRNEQGRSPLPGSPNDYYWGGAYGTYF
                     WHDPREHLFVVFMMQSPASRLRYRYLMRDLVYQALVGN"
     gene            5054..>5953
                     /locus_tag="VF991_07130"
     CDS             5054..>5953
                     /locus_tag="VF991_07130"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEX9556249.1"
                     /translation="MSKVSVDPLSAAQREMMRSALAAAFGSAPIGAVTPMAGGASGAS
                     PFRVEVGARRYLVRVEGRPSPLRNPHQYVSMRIAAEAGIAPPVHYIDEAARVAVTDFI
                     EQQPLQVYPGGPRALAQALGELLGRLQATPLFPQFVDYPDIVARLFAHVRRTGLFAAG
                     LLDAHVERLERIRQAYASGPATLVSSHNDLIPSNILFDGERLWLIDWESAYRSDPLVD
                     VATVLDTLATSPELGDILLQAWLGHAPDEALRARLELIRALTRLYYAGVLLSASAAAS
                     WTIADTDLAAPTLPEFQQAIREGR"
BASE COUNT          937 a         1979 c         1998 g         1039 t
ORIGIN      
        1 ggcggacaag ctggcgaaga tcggcgccga tttcctgatc tgtcccgaca acaccattca
       61 ccaggcgctg ccgcacgtgc tggcgcgctc gccgctcccc tggctgcaca tcgccgaggt
      121 ggtcgcagcc gaagccctcg cgcgcggctt ccgccgcatc ggcatcatcg ggacgaagtg
      181 gctggtcgac agcgaggtct acccggagaa attttcagcg cgcggcctcg agtatgtgcg
      241 gccgagcgct gacgagcgcg acgaatgcaa ccgcatcatc atggacgagc tggtgtgcag
      301 cgtcttcaag cccgagtcgg tcgcctactg ccagcgagtc atcgggcgct tcaaggatca
      361 gggctgcgac gccgtcgtgc tgggctgcac cgaactcccg ctgatcatca acgacggcaa
      421 ctcagccctg ccgaccctcg attcgacgcg cctgctggcg cgggcggcgc tcaagcgcgc
      481 ggttcacgct catgcggacg gaagatcatg acggaggctg cagcgcctgg gccacggcgt
      541 cgtcgacccg ttccagccag acgaactcga gctgcttgcg cacgtcgtcg gggatctcgt
      601 cgtagtcgcg cttgttgcgc gccggcagca gcacgcgctt gatgccggcg gcggcggcgg
      661 ccaccacctt ctccttgatg ccgccgaccg gcaggacgag gccgcgcagg ctgatctcgc
      721 cggtcatggc ggtgtcgctc ctgatggtcc ggacggtgag cagcgaggtg agcgccatga
      781 acatggcgac acccgcgctc ggcccgtcct tgggcgtggc gccggccggg acatgaacgt
      841 ggatgtcgct cttctcgaat aggccagggt cgatcttgag cgtgaccgcc tcgctcttga
      901 ccaggctgag cgccgcctgg gcgctctcgc gcatgacctc gccgagctgc ccggtcagca
      961 gcagccggcc gctgcccggc gtgcgcgtgg cctcgatgaa caggatgtcg ccgccgaccg
     1021 gcgtccaggc aaggccggtg gccacgcccg gcacgctcga gcgcatggcg acctcgttct
     1081 cgaagcggac cgcgcccaga atcttctcca gggcgtcgat gtcgatgtgc ttcttttgcg
     1141 ccgagccttc ggcgatctcg accgcgacgt ggcgcaggac gcggccgatc tcgcgctcca
     1201 ggctgcgcac gccggcctcg cgggtgtagc cctcgatgat gcgccgcaag gcggcgtcct
     1261 cgatctcgac ctgctcggcc ttcagcccat tggcttcgag ctggcggctc acgagatagc
     1321 gcttggcgat ctcgagcttc tcgcccgcgg tgtagcccga gagctggatg atctccatgc
     1381 gatcgcgcaa tgggccgggg atggtctcca gcatgttcgc cgtagtgatg aacacgatgc
     1441 ggctcaagtc gaacggcacg tcgagatagt tgtcgcggaa ggtcgaattc tgctcgggat
     1501 cgagcacctc cagcatggcc gcggcggggt cgccgtggat gccggtgccc atcttgtcga
     1561 tctcgtccag catcatcacg caatcgcgtg cgccggcctt gcggatcgcc tggatgatgt
     1621 tgcccggcag ggcgccgata taggtgcggc gatgaccgcg gatctcggcc tcgtcgtgca
     1681 cgccgcccag gctgacgcgg gcgaacttgc ggcccatggc gcgggcgatc gactggccga
     1741 gcgaggtctt gccgacgccg ggcggaccga cgaagcacag gatcggcgcc ttgccctcgg
     1801 gcgccagctt gcgcacggcg aggtactcga cgatgcgctg cttgatcttg tcgaggccgt
     1861 aatggtcggc gtcgaggatg cggcgcgcct cggcgagatc gatggatttc ggtgcgggcg
     1921 gcgcccacgg cagctcgatc agcgtgtcga gataggcgcg gatcatgccg tattcggccg
     1981 ccgcctcggg cgtccgcgtg agccggcgca gctccttgcg cgccgtcgcc tcgacgtccg
     2041 gcagcatcta ggcctcgacg atcgccttct cgaggtcggc caggtcctgc ttgttggagc
     2101 cctcgtcgcc cagctcgcgc tggatggcgg ccatctgctc gcgcagcagc acctcgcgct
     2161 ggcgggtgtc gagcgatgcc ttggtctgcc ggccgatctc ggccgacagg cgcaggactt
     2221 ccaggcgatg ggccagaagc ttggaaacct tgtcgagccg cggcaccagg tcggcggtct
     2281 cgaggatgtc ctgtttctcc tgcggcgtgg cgtcgagata ggtcgcggcg agatcggcca
     2341 gcatgccggg tgagctggtc gcctcgacgg tctggcgcat ctcgggcggc acgcgcggca
     2401 gcaggtccaa aacctcgcgc acctgctcct gcagcagcag gaagcgcgcc tcgatctccg
     2461 gcccggtcgg gctcggctcg gcgatgtgca ggccgcgcgc cagcaggaac ggatagcctt
     2521 cgacgaactc ggtgatgcga aagcgctgca caccctggca gatcagatga tggccgcctt
     2581 ccggactggt gacgtagcgc acaatgttgg cgaccgtacc ggtgtggtgc aggtcgaccg
     2641 gcgcgggatc gttcatctca ggatcgcgct gcaacacgag caggatctgg cgctgctcgc
     2701 gcaccgcctg ctgggcggcg gcgatgctgg aaggacggcc gacggtgatg ggaaacacga
     2761 tctcgggaaa gagaaccgta ttgcgcaccg gcacgacgat cagcgcgtcg gacggcagcg
     2821 gccgcgtcgg ctggccggcc gcaccgccgc cgggggtgac gtcgggcgga cgcatggccg
     2881 gcgcctttgc ggcgccacct tgggcagctt gatcaccagg cagccgttgg ccacggcgct
     2941 gcgcggcttt tcgtaacggc ccggcggcaa cgggacctgg cgctcgaaac gcccctgcgg
     3001 cagctcgagg cggtgaatga tggcggtcct cgcctcggcc ggcagcggac gctcgccggc
     3061 cagcaggagg acgccattgt ggatagcgac ctccaccttc tcggggtcga cgcccggcag
     3121 ggcaacgaag atcaggacgg cgtcctcggt ctccagcacg tcggtcggcg gctcccaatt
     3181 cacgccgcgc tgcgagacat gcggcggggt gaacacttcg cgatgcaaac gttcggcacg
     3241 cgccagcatt tgcagcgctt ccgaccacat ccagtcccgg ggatcgttgg ccatgggccc
     3301 ctatatagga agtgtgccgg gaaagcccac ccccggtcgc ctcagttgcc gaccagcgcc
     3361 tggtagacca ggtcgcgcat caggtagcgg tagcgcagcc gcgacgcggg cgactgcatc
     3421 atgaacacga cgaagaggtg ctcccgcggg tcgtgccaga aataggtgcc gtaggcgccg
     3481 ccccagtagt agtcgttggg cgagccgggc agcgggctgc gcccctgctc gttgcgcacc
     3541 gcgaagccca ggccgaaacc ctggcccatg cgcgcgctgg gctccagcgc ctcgaagcgc
     3601 cacatgtcct cgcccatctt gatgtcgggc ggcagggcat cggcggtcat caaatcgatg
     3661 gtcttgcgcg agatcagccg cacgccgtcg agctggccgc cattggcgaa catctgcagg
     3721 aaacgggcgt agtcggccgc ggtcgacacc atgccgccgc cgcccgacct ccaggtgaac
     3781 ttttcggtga cctcggggac cgacggcatc tcgttcttgg gcccctcctt catcggccgg
     3841 gcgcccctcg ccttcttgtc ggcgccgacc tcgaaggcgg tatcgcccat cttcaggggc
     3901 ttggtgatgc gctcctcgat gaacttgtcg agcggcaggc cggaggcgac ctcgacgacg
     3961 cggcccagca ggtcggtcga catcgaatat tcccaggtcg tgcccggctg gtagagcagc
     4021 gccagcttgg cgagcttgtc ggccatctcg gccagggtct ggctgcggtc ggccaccttc
     4081 atgtcgaggt aggactgctt caccgggttg gtgccggccg tgccgtaggt caggcccgag
     4141 gtatggcgca tcaggtcctg gaccgtcatc gcccgggtct gcggctcgag cgcaatctcg
     4201 accgtgccgt catccttctt cttcgacacc gcgaccttgg tgtcggcgaa ggccgggatg
     4261 tagcgcgaca ccgggtcggc caggctgagc ttgccttcct cgaccagcat catggcggcc
     4321 acgctgacga tcggcttggt catcgaggcg atgcggaaga tggtgtcgtt ggtcatcggc
     4381 gccttggctt ccctgtcgcg gaagccgaag gagtcgaaca tcaccagctt gccgttgcgc
     4441 gcgatcagca cgacggcgcc gggcaactcg ttgttcttca cgccctcgtt gatgcgatcg
     4501 gacagccgct tcagccgggt cgacaggaag cccacctcct ccggcgacgc cgccttggga
     4561 atgccctgcg cggcggccgg caatgccagg acgacggcga gggccgcgca agcggctgga
     4621 cgaataagcg acatgggatt tccctccaaa attctgccgg cgaatttccg gcattatcgg
     4681 catttccgcc gctgcttttg aaagtcagcg ctcgccgtcg catcgcacaa cggctcgcgc
     4741 gatgactttc cgcagtttcc gcaagcgcta cgccaatttt caccgccgaa cctgatgcta
     4801 ctctcgaacg cgcgacaggc agcgagcgca aacgaagcgc gacccgccaa gacaagcgta
     4861 attattactt acggcactgt caagtgttgt tttggagatg cgtttgaaat ttattggtgc
     4921 cggagacctc atcgatgccg cccacgcgca ataaaattat ataagtgcgc accatcatgc
     4981 gcaaaaatcc tgtttctatc tttatcgaaa tagtgccacg ccgaagggtg cgcggtgcgt
     5041 ggcaagggca gtcatgagca aagtttccgt agacccgctt tctgctgcac agcgcgagat
     5101 gatgcgctcg gcgctggctg ccgcctttgg ttccgccccg atcggtgcgg tcacgccgat
     5161 ggctggcgga gcttcgggtg catcgccctt tcgggtcgag gtcggcgcac ggcgctacct
     5221 ggtgcgggtg gaaggccggc ccagtccgct gcgcaatccg catcagtatg tctccatgcg
     5281 catcgcagcg gaggcgggaa ttgccccgcc agtccactat atcgacgagg cggcccgcgt
     5341 cgcagtgacg gacttcatcg agcagcagcc gctgcaggtc tatccgggcg ggccgcgcgc
     5401 actggcgcaa gcgctgggag agttgctggg acgcctgcag gccacgccgc tcttcccgca
     5461 attcgtcgac tatcccgaca tcgtcgcccg cctgttcgct cacgtgcgcc gaaccggtct
     5521 gtttgcagcc ggcctccttg atgcgcacgt cgaacgcctc gagcgcatca ggcaagccta
     5581 tgcctcgggc ccggcaacgc tggtgtccag ccacaatgat ctcattccca gcaatatcct
     5641 gttcgatggc gaacggctgt ggctgataga ttgggagtcg gcctatcgca gtgatccgct
     5701 cgtcgacgtg gcgactgtgc tcgacactct cgcgacttca ccggagctgg gggacatact
     5761 gctgcaggct tggctcgggc acgcgccgga cgaggccctg cgcgcccggc tcgagctgat
     5821 acgcgcgctg acgcgcctct actatgcggg cgtcctgctc agcgcttccg cggcggcctc
     5881 atggaccatt gccgacaccg acctggcggc gccaactctt ccggaattcc agcaagcaat
     5941 ccgcgaaggc cgg
//
LOCUS       DASWGA010000294         2907 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_664140, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000294 DASWGA010000000
VERSION     DASWGA010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_664140"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1411
                     /locus_tag="VF991_07135"
     CDS             <1..1411
                     /locus_tag="VF991_07135"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9556250.1"
                     /translation="YVTRLESEIEASGFKADLRIMASNGGVATPAMVAERPVLTLLSG
                     PAAGVIGGDWAGGLSGRRNLITFDVGGTSADIGIVTQGGFGEATARDTWIAGFPVLVP
                     MIDVHTIGAGGGSIAFVDQAGAFKVGPRSAGAVPGPAAYGLGGTRATVTDANIVLGRL
                     DSSNFLGGGMSLDEVAARRVIGELARELGLSDREAAEGVVTVINANMANAIRSRTVQK
                     GIDPRNYALVAFGGAGPLHGAEVADMLGVPEVIVPPHPGITSAVGLLISDLRYDAIRT
                     SFQVSSAADLARINSDFVAMSKELADRFTADGIDLARVSFERRGDLRYVGQGYELKVP
                     IPDGTIDGAALAKVFDAFHEIHRREYGHHFADSAIEIVNLRLVGAASAATIAKPAPGT
                     ATSLETAKVRTGACTFRVDGKLADYPTTFYRRDLLPVGERIAGPAVILQMDSTTVVPP
                     RHGFEADTAGNLIVRKADA"
     gene            1712..>2907
                     /locus_tag="VF991_07140"
     CDS             1712..>2907
                     /locus_tag="VF991_07140"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX9556251.1"
                     /translation="MTTAPLRQPAVKPDRIDPITTSVIQGALENIAVEMGYKLMRMSY
                     SSIIRESEDFGAALVDAEGRGLAESAQSTPLQSGPIPGYVRGVQRILAERGDAIRPGD
                     VIMHNDAYSGASHGPDVAFIVPVFVGGRLIAFAATTAHHLDIGALSPGSCGIVEAIDA
                     YAEGLQFKAIKVYDRGVKNDMVWQIVRDNIRASDLVVGDMDAQVAAARIGAERMAELV
                     ERYGLETFDLACTALMDHAERLMRQAIAKLPDGVYRAETAIDGYLDSDDPSKKELPIV
                     VTITKKDDSLVVDLTGTAPQVPDRPINMPLEGTADIAIWLTIRSVLLDTEIHGHIPVN
                     AGLIRPITIIAPKGCLANPTFPAPTIARFCPGNQLADTVMKALSQAMPGNVSAGIGNL
                     KVIAFSG"
BASE COUNT          471 a         1015 c          959 g          462 t
ORIGIN      
        1 ttacgtgacg cggctcgaat cggagatcga ggcctcgggc ttcaaggctg acctccgcat
       61 catggcgtcg aacggcggtg tggcgacgcc cgccatggtg gcggagcggc cggtgctcac
      121 cctgctgtcg ggtccggcgg cgggcgtgat cggcggcgac tgggcgggtg gcctgagcgg
      181 ccggcgcaac ctcatcacct tcgacgtcgg cggcacctcg gccgatatcg gcatcgtcac
      241 ccaaggcggc ttcggcgagg cgacggcgcg cgacacctgg atcgcgggct tccccgtgct
      301 ggtgccgatg atcgacgtcc acacgatcgg cgccggcggc ggctcgatcg ccttcgtcga
      361 ccaggccggc gccttcaagg tcgggccgcg ttcggccggc gccgtgccgg gcccggcggc
      421 ttacgggctt ggcggcacgc gcgccaccgt gaccgacgcc aacatcgtgc tgggccggct
      481 cgacagcagc aacttcctgg gtggcggcat gtcgctcgac gaggttgcgg cgcggcgggt
      541 gatcggcgag ctggcgcgcg agcttggcct ctccgaccgc gaggcggcgg aaggggtggt
      601 caccgtgatc aatgccaaca tggccaacgc catccgttcg cgcaccgtcc agaagggcat
      661 cgacccgcgc aactatgcgc tggtggcgtt cggcggcgcc ggcccgctgc atggcgctga
      721 ggtggccgac atgctgggcg tgcccgaggt gatcgtgccg ccgcatcccg gcatcacctc
      781 ggcggtcggg ctgctgatca gcgacctgcg ctacgacgcc atccgcacct cgttccaggt
      841 ttctagcgcg gccgacctcg cccgcatcaa ttcggatttc gtggccatgt cgaaggaact
      901 ggccgaccgt ttcaccgccg acggcatcga cttggcgcgc gtgagcttcg agcgccgcgg
      961 cgacttgcgc tatgtcggcc agggctacga gctcaaggtg ccgatccccg acggcacgat
     1021 cgacggcgcg gcgctcgcca aggtgttcga cgccttccac gagatccatc gccgcgagta
     1081 cggccatcac tttgccgact ccgccatcga gatcgtgaac ttgcggctgg tcggcgcggc
     1141 cagcgccgcc accatcgcca aaccggcacc cggcacggcc acgtcgctcg agacggccaa
     1201 ggtgcgcacc ggcgcctgca ccttccgcgt cgacggcaag ctcgccgact atcccacgac
     1261 cttctatcgc cgcgacctgc tgccggtcgg cgagcgcatt gccggtcccg ccgtcatcct
     1321 gcagatggac tcgaccaccg tggtgccgcc gcgccacggc ttcgaggccg acacggcggg
     1381 caacctgatc gtgcggaaag ccgatgctta aggagtcctg cactttcctc gggggtttcc
     1441 gcaggtttcc gctagtcaaa gacagccgcc gacagggctg cgaaaacatc gataaaatgg
     1501 gcatccgagg gggtttccgc actttccgct acccttttcg agatgttggc catgagggtc
     1561 gtgtcattgc tgggggcgcg cgactccgat cgcgcgtctt cgttcgcgac aggaggaaga
     1621 ccgcgccatc ggagtggcgc gctcccagca aagatacctg ccccaaatcg aagtgaaagt
     1681 caaggaccgt aagtttgact aggagcctcc gatgaccacc gcccctctcc gccagccggc
     1741 cgtaaaaccc gaccgcatcg acccgatcac caccagcgtg atccagggcg cgctggagaa
     1801 catcgcggtc gagatgggct ataagctgat gcgcatgagc tactcctcga tcatccgcga
     1861 gtcggaggat ttcggggcgg ctctggtcga tgccgagggc cgcgggctgg ccgaatcggc
     1921 gcagtcgacg ccgctgcagt cgggcccgat cccgggctat gtgcgcggcg tgcagaggat
     1981 cctggccgag cgcggcgacg cgatccgtcc gggcgacgtg atcatgcaca acgacgccta
     2041 ttcgggcgcg agccacggcc cggacgtcgc cttcatcgtg ccggtgttcg tcggcggccg
     2101 gctgatcgcc ttcgccgcca ccacggcgca ccatctcgac atcggcgcgc tgtcgcccgg
     2161 ctcgtgcggc atcgtcgagg cgatcgacgc ctatgccgag ggcctgcagt tcaaggcgat
     2221 caaggtctac gaccgcggtg tgaagaacga catggtgtgg cagatcgtac gcgacaacat
     2281 ccgcgcgtcg gacctggtgg tcggcgacat ggacgcccag gtggccgccg cgcggatcgg
     2341 cgccgagcgc atggccgagc tggtcgagcg ctatggcctg gaaaccttcg acttggcctg
     2401 caccgccctg atggaccatg ccgagcgact gatgcgccag gctatcgcca agctgcccga
     2461 cggcgtctat cgcgccgaga cggcaatcga cggctatctc gacagcgacg atccctccaa
     2521 gaaggaactg ccgatcgtcg tcaccatcac caagaaggac gattcgctgg tggtcgacct
     2581 caccggcacc gcgccgcagg tgcccgaccg gccgatcaac atgccgctcg aaggcaccgc
     2641 cgacatcgcg atctggctca ccatccgatc ggtgctgctc gacaccgaga tccacggcca
     2701 catcccggtc aatgccggcc tgatccggcc gatcacgatc atcgccccca agggctgcct
     2761 ggccaacccg accttccccg ccccgaccat cgcccgcttc tgcccgggca accagctcgc
     2821 cgacacggtg atgaaggcgc tgagccaggc gatgccgggc aatgtctcgg ccggcatcgg
     2881 caatttgaaa gtcatcgcct tctcggg
//
LOCUS       DASWGA010000295         1587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_39708, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000295 DASWGA010000000
VERSION     DASWGA010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39708"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..894)
                     /locus_tag="VF991_07145"
     CDS             complement(106..894)
                     /locus_tag="VF991_07145"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX9556252.1"
                     /translation="MDLLSAGCRAGRLRQAGLPILATLLALAAAVSPAAAQGRARGSP
                     DLGEVARLVVDRTNDMRRGEGREPVAAASKLDATAQSFAAFMASNDRYGHEADGRTAA
                     QRVQEQGYTYCIVLENIASLYSSSGFGSQELANKVTQGWWQSEGHRRNMLDVEVTDIG
                     VAIARSSKTGTYYAVQLFGRPYSTRIEFRVANASPAAIEYDLNGKGFSLPPHATRMHQ
                     ECRAARLTVRLPGERQSISVKPADGDRYEVERVGSRFQLKRAAS"
     gene            981..>1587
                     /locus_tag="VF991_07150"
     CDS             981..>1587
                     /locus_tag="VF991_07150"
                     /inference="COORDINATES: protein motif:HMM:NF014615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEX9556253.1"
                     /translation="MADAAFKLAQAFESRILLMDGAMGTQIQARDLSADDFGGPSLEG
                     CNEHLNLTRPDVIRSIHEAYLDAGADLISPNTFGCAPYVLAEYGLAEQCHDITLAGAR
                     LAREAADSRNTADRPRFVLGAMGPGTRTITVTGGVTFDQVLDAYYRQARALILGGVDT
                     LLLETCQDTLNVKAAAIGVRRAMAEAGRILPLMVSGTIEPMG"
BASE COUNT          244 a          548 c          535 g          260 t
ORIGIN      
        1 tacacgtcag gcgtcttcca caagtacgcc atcacggtgc ggaacgcctc cgagggcgcg
       61 gtcaccggct gagcgcggcc gcccagcgac gcggcaaggc ccgctctacg aggccgcccg
      121 cttgagctgg aaccgcgacc cgacgcgttc gacttcgtag cggtcgccgt ccgcgggctt
      181 gaccgagatc gactggcgct cgcccggcag gcgcaccgtc agccgcgcgg cgcggcattc
      241 ctggtgcatg cgcgtggcgt gcggcggcag ggagaaccct ttgccgttga gatcgtattc
      301 gatcgcggca ggcgatgcgt tggcgacgcg gaactcgatg cgcgtgctgt acggcctgcc
      361 gaagagctgg accgcgtaat aggtcccggt tttcgagctc cgcgcgatcg cgacgccgat
      421 gtccgtcacc tcaacgtcga gcatgttcct gcgatgccct tctgattgcc accagccttg
      481 cgtgaccttg ttggccagct cctgggatcc gaagcccgaa gagctgtaga gcgaggcgat
      541 gttctccagc acgatgcaat aggtgtagcc ctgctcctgc acccgctgcg cggccgtcct
      601 gccgtcggcc tcgtggccgt accggtcgtt gctggccatg aaggccgcga agctctgggc
      661 cgtggcgtcg agctttgaag cggccgcgac cggctcccgg ccttcgccgc gccgcatgtc
      721 gttggtccgg tcgacgacca gccgggcgac ctcgcccaga tccggcgagc cccgggcgcg
      781 cccttgggcg gccgcgggcg acacggccgc cgccagcgcc agcagtgtgg caaggatcgg
      841 caggcccgcc tggcgaaggc ggccggcccg acagcccgcc gacaagaggt ccatagggtt
      901 caaagtatcc agtatttgac cgtgccggag cgcggcccgc gcccctgcgt gttccggcgt
      961 cactgcgcta gaatgagcgc atggccgacg ccgccttcaa gctcgcccaa gccttcgaga
     1021 gccgcattct gcttatggac ggcgccatgg gcacccagat tcaggcgcgg gatctctcgg
     1081 ctgacgactt cggcgggccg agcctcgagg ggtgcaacga gcacctcaac ctcacgcggc
     1141 ccgacgtcat ccgctccatc catgaggcgt acctggatgc gggcgccgat ctgatctcac
     1201 ccaatacatt cggttgtgcc ccctatgtgc ttgccgaata tggccttgcc gaacagtgcc
     1261 acgacatcac gctagccggc gctcgactgg ctcgcgaggc cgccgacagc cggaacacgg
     1321 cggatcgccc gcgcttcgtc ctgggcgcca tgggtcccgg cacacggacg atcacggtga
     1381 ctggaggtgt gacgttcgat caggtgctgg acgcttacta caggcaggcg cgcgccctga
     1441 ttttaggcgg cgtggacacg ctcctcctgg agacctgcca ggacacgttg aacgtcaagg
     1501 cggcggccat cggggtcagg cgcgcgatgg ctgaggcggg gcgcatcctg ccgctcatgg
     1561 tcagcggcac catcgagccc atgggca
//
LOCUS       DASWGA010000296         3967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_664280, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000296 DASWGA010000000
VERSION     DASWGA010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3967
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_664280"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="VF991_07155"
     CDS             complement(<1..760)
                     /locus_tag="VF991_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEX9556254.1"
                     /translation="MEFLSDSSLGTIGLAILLFALVLTFGFEFVNGFHDTANAVATVI
                     YTNSLTPTQAVVWSGLWNFLGVVSSSGAVAFAIVALLPVELILHVRTEAGFAMVMALL
                     LSAIIWNVGTWYLGLPASSSHTLIGSIVGVGLMNSLIAGQGFGEGVNWGKVEDIVVAL
                     VTSPLIGFFGAVALLLLARMVIRTPGIYQAPKGKAPPPWGIRWVLLLTCTGVSFAHGS
                     NDGQKGMGLIMLILIGLVPATYALHLPLASDKLQA"
     gene            complement(803..1792)
                     /locus_tag="VF991_07160"
     CDS             complement(803..1792)
                     /locus_tag="VF991_07160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556255.1"
                     /translation="MKDAQRVLHIRCGDDIKGKLAEAGLAGDYLSFADPAWLGPPPAF
                     NAWLAGRAALIADRSGLPQPKVRAELGEAYWRLARAPADYRHIVLWFEHDLYDQAALV
                     RVLANFAQRTGLPRVELISIDRFRGIKRFIGLGQLTAQQLASLWPKRKRISRRQLALG
                     TRAWAALRALTPEPLEALLASDMRALPFLKAALKRHLQELPWTTDGLSLTERETLAAL
                     ARGPLTVSELFAETQMKRDPLPFMGDRFFWSVVRDLIDAPRPPVAVSAATRRMAWPRR
                     VLRLTPTGRALMAGKLDWQAERPLPRWVGGIPAGPGAPDWRWDPKNRHVTRLG"
     gene            complement(1789..2724)
                     /locus_tag="VF991_07165"
     CDS             complement(1789..2724)
                     /locus_tag="VF991_07165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoyl-D-amino-acid hydrolase"
                     /protein_id="HEX9556256.1"
                     /translation="MTRFVTIGAAQMGPIQRSDTRRDVVERLIAHLREAKRMGCELVV
                     FPELTLTTFFPRWWMTDQAEIDSFFEREMPSNETAPLFNEAKRLALGFCLGYAELANE
                     NGTIRRFNTSILVERDGLIVGKYRKVHLPGHAEHEPERPFQHLEKRYFEVGNLGFPVY
                     RAFGGNMGMCICNDRRWPETYRVMGLQNVEMVLLGYNTPLHNAPSPDHDQHSWFHNQL
                     SMQAGAYQNGTWVVGVAKGGTEEDVPSLADSMIVAPSGKVVARAAGDGDELIVHRCDL
                     DAGQSYKRTTFNFAIHRQPDHYRMIVERKGAMDPP"
     gene            complement(2774..3607)
                     /locus_tag="VF991_07170"
     CDS             complement(2774..3607)
                     /locus_tag="VF991_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9556257.1"
                     /translation="MADARDGSRRIVFTGAAGGIGTMIRPLLAPLYPGLVLSDKVKPK
                     NLLASETFVAADLTKPDEVAAALKGADSVIHLGGFSVEGPWDAILQANIIGCYNLFEA
                     ARQAGVKRVIFASSNHAVGFYPRKRKIGTDVTVRPDSRYGVSKAFGEALGALYSDKHG
                     MVVTCIRIGNVGPRPLDVRRLSIWISPEDIVQLIRIGLEHPDIRFDILYGASDNAAAW
                     WDNSRARQLGYRPTGKAEDHRAHAEAEQAKIGPDSVGDLFQGGTFCSAEFTNDVKCAG
                     P"
     gene            complement(3594..>3967)
                     /locus_tag="VF991_07175"
     CDS             complement(3594..>3967)
                     /locus_tag="VF991_07175"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEX9556258.1"
                     /translation="RQIAAIRAAWRAIDRALRAGEGAVAEDFAFHRAIAEATGNRQFP
                     RFLAFLGSHVIPRQSVRLSLDTPAERRAYLERIQHEHARIVTGISGHDPAEARRAMRD
                     HLTRSLERYRKLMGGSKNGRR"
BASE COUNT          701 a         1302 c         1332 g          632 t
ORIGIN      
        1 tcgcctgcag cttgtcggac gccagcggca ggtgcagcgc ataggtcgcc ggcacaaggc
       61 cgatcaggat caacatgatc agccccatgc ccttctgccc gtcgttcgag ccgtgcgcga
      121 agctcacgcc ggtgcaggtc aacaggagga cccaacggat gccccagggc ggcggcgcct
      181 tgcctttggg tgcctggtag ataccgggcg ttctgatcac catcctggcc aggagcagca
      241 aggcgacggc gccgaagaag ccgatcagcg gcgatgttac cagcgcgacc acgatgtcct
      301 cgaccttgcc ccagttcacg ccctcgccga agccctggcc ggcgatcagc gaattcatca
      361 atccgacgcc cacgatcgaa ccgatcaggg tgtgcgagct ggaagccggc aggccgagat
      421 accaggtgcc gacattccag atgatggccg acaaaagcag cgccatgacc atggcgaagc
      481 ccgcttcggt gcggacatgg aggatgagct cgaccggcag caaggccacg atggcgaaag
      541 ccaccgcgcc cgacgagctc acgacgccca ggaagttcca caggcccgac cacaccacgg
      601 cctgggtggg ggtgagcgag ttggtgtaga tgaccgtcgc cacggcgttc gccgtgtcgt
      661 gaaagccatt cacgaactcg aagccgaagg tcagcaccag ggcgaacagc aggatggcaa
      721 gcccgatcgt gcccagcgaa ctgtccgaca gaaactccat ggcccccaac ctgcccacga
      781 gctttgcgcc cgatcgcccc gatcacccta gtcgagtgac atgccgattt ttcggatccc
      841 agcgccagtc cggcgctccc ggtccggccg gtatgccgcc cacccaacgc ggcagcggcc
      901 gctcggcctg ccagtcgagc ttgccggcca tcagcgcgcg accggtcggt gtcaggcgca
      961 gcacccggcg tggccacgcc atgcgacgtg tggcggcgct gacggcgacc ggcggccgcg
     1021 gcgcatcgat caggtcgcgc accaccgacc agaagaaccg atcgcccatg aagggcagcg
     1081 gatcgcgttt catctgagtc tcggcaaaga gctcggacac ggtcaacggc ccccgggcca
     1141 atgccgcaag cgtctcgcgc tcggtgagcg acaggccgtc ggtcgtccaa ggcagctcct
     1201 gcaggtggcg cttcaaggcg gccttgagaa agggcagcgc gcgcatgtcc gacgcgagca
     1261 gcgcctcgag cggctcaggc gtgagcgcgc gcaaggccgc ccacgcgcgc gtgccaagcg
     1321 cgagctggcg gcggctgatg cgcttgcgct tgggccatag cgaggcgagc tgctgggcgg
     1381 tgagttggcc gaggccgatg aagcgcttga tgccgcgaaa gcgatcgatc gatatgagct
     1441 cgacccgcgg caagcccgtg cgctgggcga agtttgccag cacccgcacc agagcggctt
     1501 gatcgtaaag atcgtgctcg aaccacagca cgatgtgacg atagtcggcg ggcgcccggg
     1561 ccagccgcca ataggcctcg cccaattcgg cgcgcacctt gggctgcggc aggccgctac
     1621 ggtcggcgat cagcgccgcg cggccggcaa gccaggcatt gaaggcgggc ggcggcccaa
     1681 gccatgccgg atcggcgaac gacagatagt cgcccgcaag gcccgcttcg gcgagcttgc
     1741 ccttgatatc gtcgccgcag cggatgtgga ggacgcgttg cgcatctttc atggcggatc
     1801 catcgcgccc ttgcgctcga cgatcatgcg gtaatgatcg ggctggcgat ggatcgcgaa
     1861 gttgaacgtc gtgcgcttgt aactttggcc ggcgtcgagg tcgcagcgat gcacgatcag
     1921 ttcgtcgcca tcgccagccg cccgggccac gaccttgccc gagggcgcca cgatcatgct
     1981 gtcggcgagc gatggcacat cctcctcggt gccacccttg gccacgccca ccacccaggt
     2041 gccgttctgg taggcgccgg cctgcatgga gagctggttg tggaaccacg agtgctggtc
     2101 gtggtcgggc gacggcgcgt tgtgcagcgg cgtgttgtag cccagcagca ccatctcgac
     2161 gttctgcagg cccatgaccc gataagtctc gggccagcgc cggtcgttgc agatgcacat
     2221 gcccatgttg ccgccaaagg cgcgatagac cggaaagccg agattgccga cctcgaagta
     2281 gcgtttctcg aggtgctgga acggccgctc gggctcgtgc tcggcatggc ccggcaagtg
     2341 gaccttgcgg tacttgccga cgattaggcc gtcgcgctcg accaggatcg aggtgttgaa
     2401 gcggcggatc gtgccgttct cgttggcgag ctcggcgtaa cccaggcaga agcccagcgc
     2461 gagccgcttg gcctcattga acaatggcgc ggtttcgttg gatggcatct cgcgctcgaa
     2521 gaacgaatcg atctccgcct ggtcggtcat ccaccagcgc ggaaagaacg ttgtcagcgt
     2581 cagctcgggg aataccacca gctcgcagcc catgcgcttg gcctcacgca aatgggcgat
     2641 cagccgctcg accacgtcgc ggcgcgtatc gctgcgctga atggggccca tctgcgccgc
     2701 acctattgtc acaaaacgag tcatcgtcac cttcctcggc gattattgcc gcggacggcg
     2761 catgctccaa gcgctaaggg ccggcgcact ttacatcgtt ggtgaactcg gccgagcaga
     2821 aagtgccacc ctggaagaga tcgccgacag aatcgggccc gatctttgct tgctcggcct
     2881 cggcatgcgc gcggtgatcc tcggccttgc cggtaggacg atagccgagc tggcgggcgc
     2941 gcgaattgtc ccaccacgct gccgcgttgt ccgacgcacc gtaaaggatg tcgaagcgga
     3001 tgtcgggatg ctccaacccg atgcggatca gctgcacgat gtcttccggc gagatccaga
     3061 tcgacagccg ccgcacatcg agcggccgcg gcccgacatt gccgatccgg atgcaggtca
     3121 cgaccatgcc atgcttgtcg gaatagagcg cccccagcgc ctcaccgaat gccttgctga
     3181 cgccgtagcg gctgtcgggt cgcaccgtga cgtcggtgcc gatcttgcgc ttgcgcggat
     3241 agaaaccgac ggcgtggttg gacgaggcga agatcacccg tttgacaccg gcctggcgcg
     3301 ccgcctcgaa gagattgtag cagccgatga tgttggcctg cagaatggcg tcccacggtc
     3361 cctcgaccga gaagccgccg agatggatga cgctgtcggc gcctttgagc gccgccgcca
     3421 cttcgtccgg cttggtgagg tcggcggcga cgaaagtctc gctggccagc aggttcttgg
     3481 gcttcacctt gtcgctcagc accaggccgg ggtagagcgg cgccagcaac gggcggatca
     3541 tggtgccgat gccgcctgct gcgccggtga acacgatgcg gcgcgagccg tccctagcgt
     3601 cggccattct tgcttcctcc catcagtttt cgatagcgct caagcgagcg cgtgagatgg
     3661 tcgcgcatgg cccgccgtgc ctcggccgga tcgtggccgg aaatgccggt cacgatgcgc
     3721 gcgtgctcat gctggatgcg ttcgagatag gcgcgccgtt cggccggcgt gtcaagcgag
     3781 agccgtacgc tctggcgcgg gatcacgtgg ctgccgagaa aggccaggaa gcgcgggaac
     3841 tgccggttgc cggtggcctc ggcaatggcg cgatggaagg cgaaatcctc ggcgaccgcg
     3901 ccctcgccgg cacgcagcgc acggtcgatg gcgcgccagg cggcgcggat ggcggcgatc
     3961 tgccgcc
//
LOCUS       DASWGA010000297         3595 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1933996, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000297 DASWGA010000000
VERSION     DASWGA010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3595
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1933996"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..744
                     /locus_tag="VF991_07180"
     CDS             <1..744
                     /locus_tag="VF991_07180"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9556259.1"
                     /translation="APHALDTCSDELLKECARRADRTGARVFLHVAQNEPEVAAVRRR
                     GHDGALACLVQTGLATSNTVAAHAIYLSDAEFDAWPAYGIAIAHCPASNLKIEARTLP
                     VARLVGRVPIGLGTDWTASNNSMDMLAEARLAALVGKMRADDPEALPVEQMVRMLTID
                     GARALGLDGLIGSIEVGKRADLVVFDANRLEATPAHDPAANLIYSLGPRSVRDVLVDG
                     ALLVREGKLTRTDEAALARRHRTHGRPLS"
     gene            945..1085
                     /locus_tag="VF991_07185"
     CDS             945..1085
                     /locus_tag="VF991_07185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556260.1"
                     /translation="MTVVTQPLRKRDDDERVFKYVGVAGVDKKRIVQVGVTAEQMVPA
                     CK"
     gene            1264..2463
                     /locus_tag="VF991_07190"
     CDS             1264..2463
                     /locus_tag="VF991_07190"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9556261.1"
                     /translation="MSNGSNSALWQSRWVRAAALVVLVCLAGLAWFVVGERGKAAPSA
                     ASAPPPTPSVGVRLVRTKGVSEAFEFAGRIKAVEKVELRARVEGFLERVLFREGQARE
                     GQDVKAGDLLYQIEKVQFQAQVDQAKANLAAAEAQLLHDQLEYNRQLELSKRQFSPQS
                     QVDQLKAAMDSSAAKVLQMKAALTQAKVNLDYTDIHAPIDGRIGRTAYTVGNLVNPAS
                     GVLATIVSQDPVYVLFPVSVRDLETIREARRKEGGEIAKIDIRLRLSTGQDYPQRGVW
                     NFTDPQVDQQTDSLIMRATMPNPERTLADGQFVTAVIRERREAPRLVIPQAALQVDQS
                     GYYTLVVDDQHKVEQRRVQTGPNLGTDIVVTSGVREGEKVIVDGVQKVRPGQVVQEQV
                     LPPAVGG"
     gene            2566..>3595
                     /locus_tag="VF991_07195"
     CDS             2566..>3595
                     /locus_tag="VF991_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006073445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9556262.1"
                     /translation="MISGIFIDRPRLAFVVSIVITLAGLLAIFQIPVAQFPEIVPPQV
                     SLTTLYPGADAEVVEATVAQPIEQQITGVDNALYFQSASAADGSYNLTVTFALGTDPD
                     INTVNVQNRAQLATPLLPQEVQRQGLIIRKKSAALLQIITLYSPKKTYDALYLNNYAT
                     INVLDPLSRVRGVGQAQLFGALDYSLRLWLDTDRLTAFNLTPSDVVAAVQSQNVQAAL
                     GRIGAAPTPQAQQFQLTIKTQGRLTRPDQFDNIIVRANPDGSVVRVKDVARADLGAKS
                     QERYSRFNGAPTAAIGIFQSPGANAVDVARHVREVMDELKQRFPDDLVYDVFWDSTVF
                     VPSTIQEVV"
BASE COUNT          626 a         1223 c         1168 g          578 t
ORIGIN      
        1 gccccgcacg cgctggatac ctgctccgac gagcttttga aagagtgcgc gcggcgggct
       61 gacaggacag gcgcgcgggt cttccttcat gtcgcgcaaa acgagcccga ggtcgccgcc
      121 gtgcgtcggc gcggccatga cggcgcgttg gcctgcctgg tccaaaccgg cctggcgacg
      181 tccaataccg tcgcagcaca cgcgatctat ctcagcgacg cggagttcga cgcctggccg
      241 gcctacggca tcgccatcgc ccattgcccg gcgagcaatc tcaagatcga ggcccgcacc
      301 ctgcccgtgg cgcggctggt cggccgggtg ccgatcgggc ttggcaccga ctggacggcc
      361 tcgaacaaca gcatggacat gctggccgag gcgcggctcg ccgccctggt cggcaagatg
      421 cgcgccgacg atcccgaggc gcttccagtg gaacagatgg tgcgcatgct gacgatcgac
      481 ggcgcgcgcg cgctgggact cgacgggctg atcggcagca tcgaggtcgg caagcgcgcc
      541 gacctcgtcg tgttcgacgc caatcgcctg gaagccacgc cggcgcacga tccggcggcc
      601 aatctgatct attccctcgg cccccgctcg gtgcgcgacg tgctggtcga cggcgcgctt
      661 ctggtgcgcg agggaaagct gacgcgcacc gacgaggccg ccctggcgcg ccggcaccgg
      721 acccatggca ggccactgtc ctagcgacgg acgcccctgg aagccggccg agatcaatgc
      781 ggtcgtcaag gacatcgcgg ccaagtcgtc gatcgaggaa ttctggatcg ccgattccaa
      841 aggtcacgcc tatctcacca acaccggctt cgatttcacg ttcacccccc aatcccggca
      901 agcagccgca ggccgcttcc ttctggccgt tgatcggcgg cgccatgacg gtggtgactc
      961 agccgctgcg caaacgcgac gacgacgaac gtgtgttcaa atatgtcggc gtcgcgggcg
     1021 tcgacaagaa acgcatcgtg caggtcggag tcaccgccga acagatggtg ccggcctgca
     1081 aatagaccct gctaataggc cctcgctgaa atcctcgtgc atggccggct tgaattcact
     1141 ccttctgctg cctttcttgg ttggcagcga atttgcgata ggggatgctc gggccacgac
     1201 tgacgactgg caaccggtcg ccgcgcccgt tcggattggc ggctggagat gacgaggtaa
     1261 gtcatgtcga acggcagcaa cagcgcgctc tggcagtccc ggtgggttcg cgctgctgcg
     1321 cttgtcgtgc tggtgtgcct cgcagggctc gcgtggttcg ttgtcggtga gcgcggcaag
     1381 gccgcgccgt cggctgcatc ggcgccgccg ccgacgccga gcgtcggcgt gcggttggtt
     1441 cgcacgaaag gcgtgagcga ggcgttcgag ttcgctggcc gcatcaaggc ggtggagaag
     1501 gtggagctgc gcgcccgcgt cgagggcttc ctcgaaagag tcctgttccg cgagggccag
     1561 gcccgcgagg gtcaggacgt caaggcgggc gacctgctct atcagatcga gaaggtgcag
     1621 ttccaggcgc aggtcgatca ggccaaggca aaccttgccg ccgccgaggc ccagctcctc
     1681 catgaccagc tcgaatacaa ccgccagctc gagctgtcga agcgccagtt cagcccgcag
     1741 agccaggtcg accagctgaa ggcggccatg gactcgagcg cggccaaggt gctgcagatg
     1801 aaggcggcgc tgacccaggc caaggtcaat ctcgactaca ccgacatcca cgcgccgatc
     1861 gacggccgca tcggacgcac cgcctacacg gtcggcaacc tcgtcaaccc ggcaagcggc
     1921 gtgctggcga ccatcgtcag ccaggatccg gtctatgtgc tgttcccggt gagcgtgcgc
     1981 gacctcgaga ccatccgcga ggcgcggcgc aaggagggcg gcgagatcgc caagatcgac
     2041 atccgcctgc ggctctcgac cggccaggac tatccgcagc gcggcgtctg gaacttcacc
     2101 gatccgcagg tcgaccagca aaccgattcg ctgatcatgc gggccaccat gcccaacccc
     2161 gagaggaccc tggccgacgg ccagttcgtg accgccgtga tccgcgaaag gcgggaggcg
     2221 ccgcgcctgg tgatcccgca ggcggcgttg caggtcgacc aatccggcta ttacacgctg
     2281 gtcgtcgacg atcagcacaa ggtcgagcag cggcgcgtgc agaccggccc caatctcggc
     2341 accgatatcg tcgtgacttc aggcgtgcgc gagggcgaga aggtgatcgt cgacggcgtc
     2401 cagaaagtgc ggccgggcca ggtcgtgcag gagcaggtcc tgcctcctgc ggtgggcggc
     2461 tagcgtgttc ttcctctcat gctcatttgg cccgctcagg atcatgagcg ggccggaggc
     2521 ccgcggtccg gaagaccatg agcgccgcca gccaggcagg cggccatgat ctccggcatc
     2581 ttcatcgacc ggccgcgact ggcgttcgtc gtctcgatcg tcattacact ggccggcctg
     2641 ctggcaatct tccagatccc cgtcgcgcag tttcccgaga tcgtgccgcc gcaggtttcg
     2701 ctgacgacgc tttatcccgg cgccgatgcc gaggtggtcg aggcgacggt cgctcagccc
     2761 atcgagcagc agatcaccgg tgtcgacaac gccctctatt tccagtccgc tagcgccgcc
     2821 gacggcagct acaacctgac cgtgaccttt gcgctcggca ccgatccgga catcaacacg
     2881 gtcaacgtgc agaatcgggc ccagctcgcg acgcccttgt tgccgcagga agtgcagcgc
     2941 cagggtctga tcatccgcaa gaaatccgcc gcgctgctgc agatcatcac gctttactcg
     3001 cccaagaaga cctacgatgc gctctacctg aacaactacg cgacgatcaa cgtgctcgac
     3061 ccgctgtcgc gggtgcgcgg cgtgggtcag gcgcagctgt tcggcgcgct cgactattca
     3121 ctccggctct ggctcgacac cgatcgtctc accgccttca acctgacgcc atccgacgtc
     3181 gtggcggcgg tccagagcca gaacgtccag gcagcgctgg gtcgcatcgg cgcggcgccg
     3241 acgccgcagg cccagcaatt ccagctcacc atcaagaccc aggggcggct gacgcggccc
     3301 gaccagttcg acaacatcat cgtgcgggcc aatcccgacg gctcggtcgt gcgggtcaag
     3361 gatgtggccc gcgccgatct cggcgccaag tcacaggaac gctacagccg cttcaatgga
     3421 gcgccgaccg cggcgatcgg catcttccag tcgcccggcg ccaacgccgt cgacgtcgcg
     3481 cgccatgtcc gcgaagtgat ggacgaactg aagcagcgct tcccggacga cctggtctac
     3541 gacgtattct gggattccac cgtgttcgtg ccctcgacca tccaggaggt cgtgc
//
LOCUS       DASWGA010000298         2900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1044195, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000298 DASWGA010000000
VERSION     DASWGA010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2900
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044195"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VF991_07200"
     CDS             complement(<1..553)
                     /locus_tag="VF991_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX9556263.1"
                     /translation="MTQELLYDKRGEIGWITFNRPQARNALTFAMYEGLAEICSRIGQ
                     TREAKALVITGAGDKAFAAGTDIAQFKDFKDAEDGIAYERKMDRILDAIERCAVPTIA
                     AVAGFCTGGGAAIAAACDLRIAAANAQFGFPIARTLGNCLSMANYARLPALIGSQRVK
                     EILFLAKLIDAPTAHQVGLVSELL"
     gene            545..1303
                     /locus_tag="VF991_07205"
     CDS             545..1303
                     /locus_tag="VF991_07205"
                     /EC_number="4.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEX9556264.1"
                     /translation="MGHFTFMALERLLKGFADFRLGYYREHLDLFEKLATEGQSPKIL
                     IVACADARVDPGILTQTQPGDIFTVRNVAAMVPPAQIPPDARHHGTSSAIEFAVRGLG
                     VEHVVVLGHALCGGIGALVDGRESAYADYDYLSTWTAIAQEVRDHAVRELSGRPRAEI
                     ARAVEQAAVLNSLLNLMSFRWIAEKVAAGTLKLHGWWFNMTEGQLYAFNPAAAIFEAV
                     PGVDVSPTIAAGTKLSDIKLDRFISAVAGRRPAF"
     gene            complement(1357..1746)
                     /locus_tag="VF991_07210"
     CDS             complement(1357..1746)
                     /locus_tag="VF991_07210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556265.1"
                     /translation="MRAFLLLLLLALGALAAPARSEPLQVTGYAGVLGEWELTATVAT
                     GRASQRTREYAGPLTMKHVGWCTQEGPEEKAGEIRLQISTLSSRLKATVSVDGVECTY
                     RASLSDSYTGMMECPGRRAVPLELWVK"
     gene            complement(1743..>2900)
                     /locus_tag="VF991_07215"
     CDS             complement(1743..>2900)
                     /locus_tag="VF991_07215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9556266.1"
                     /translation="LAYAKAMEQLAARYPNDDEAQIHYALALNTSASPADKTYASQLK
                     GAAILEVIAKRQPQHPGVAHYLIHLYDYPPIADKGIEAARRYAKIAPAAPHALHMPSH
                     IFTRVGYWQESIDSNIASGRAAKEAGDFHEELHAMDYLVYAYLQLGQDKKAKDVIDEM
                     NTVTAFTESALPGPYGRAASPARYAVERGDWKAAAALEVRPSPLPQVQAITYFARAVG
                     AARSGDPAAAKADIAKLAELQDKLIQAKDAYWSGQVDVQRQIATAWVLYAEGKRDEAL
                     SAMSAAADAEDKTEKHPVTPGVPKPARELYGEMLLESGMAKEALAAFEATLKKEPNRL
                     GATMDAARAAEKAGDSTKAREYYEKVVAIAGGADKTRTDVNDARAFLAKKS"
BASE COUNT          459 a          934 c          956 g          551 t
ORIGIN      
        1 ccagcagctc gctgaccagc cccacctggt gcgccgtcgg cgcgtcgatc agcttggcca
       61 ggaagagaat ttccttcacc cgctgcgaac cgatcagcgc ggggagccgg gcatagttgg
      121 ccatcgacag gcagttgccc aaggtgcggg cgatggggaa gccgaactgg gcattggcgg
      181 cggcgatcct gagatcgcat gccgccgcga tggcggcacc gccgccggtg cagaagcccg
      241 cgacagcggc gatggtcggc acggcgcagc gctcgatggc gtcaagaatg cgatccatct
      301 tgcgctcgta ggcaatgccg tcctcggcgt ccttgaagtc cttgaactgg gcgatgtcgg
      361 tgccggcggc aaaggccttg tcgccggcgc cggtgatgac cagggctttc gcttcgcggg
      421 tctggccgat gcggctgcag atctcggcca aaccttcata catcgcgaaa gtaagcgcat
      481 tgcgcgcctg gggccggttg aaggttatcc agccgatttc gccacgcttg tcgtagagca
      541 gttcttgggt catttcacct tcatggcgtt ggaaagactt ctaaagggct tcgcggactt
      601 ccggctgggc tattaccgcg agcatctcga cctgttcgaa aagctcgcga ccgagggcca
      661 gtcgcccaag atcctgatcg tggcctgcgc cgacgcccgc gtcgaccccg gcatcctgac
      721 gcaaacccag cccggcgaca tcttcaccgt gcgcaatgtg gcggccatgg tgccgccggc
      781 gcagatcccg cccgacgcgc gccatcacgg cacgtcgtcg gccatcgagt tcgcggtacg
      841 cgggctcggc gtcgaacacg tcgtggtgct gggccatgcg ctgtgcggcg gcatcggcgc
      901 gctggtcgac ggtcgcgaga gtgcctatgc cgactacgat tatctctcga cctggaccgc
      961 catcgcccag gaggtgcgcg accatgccgt gcgcgagctt tcgggcaggc cgcgcgcgga
     1021 gatcgcgcgc gccgtcgagc aggccgccgt gctcaacagc cttttgaacc tgatgagttt
     1081 ccgctggatc gcggaaaagg tcgcggccgg cacgctcaag ctgcacggct ggtggttcaa
     1141 catgaccgaa ggccaactct atgccttcaa tccggcggcg gccatcttcg aggcggtgcc
     1201 gggcgtcgac gtttcaccca cgattgccgc cggaacaaag ctttcggaca tcaagctcga
     1261 ccgtttcatt tccgctgtcg ctgggagaag gccggcgttc tgacggccgg tggccgtcat
     1321 cccgagcagt tgcgagggat ctggctcgcc agcaaactac ttaacccaca gctcgagcgg
     1381 caccgcccga cgaccgggac actccatcat gccggtatag gagtccgaca ggctggcgcg
     1441 ataggtgcac tcgacgccgt cgaccgacac tgtcgccttc aatcgggacg acagggtcga
     1501 tatctgcagt cgtatttcgc cggccttctc ctccggaccc tcctgcgtgc accagccgac
     1561 atgtttcatc gtcaaaggtc cggcatattc cctggttcgc tgggaagccc ttcccgtggc
     1621 gaccgtggcc gtcaactccc attcgcccag cacgccggca tatccggtca cctgaagcgg
     1681 ttcgcttcgg gccggagcag ccagcgcgcc gagcgcgagc aggagcagga gcaggaatgc
     1741 tctcacgatt tctttgccag gaacgcgcgc gcgtcgttga cgtccgttcg ggtcttgtcg
     1801 gcaccgcctg cgatggcgac gaccttttcg taatattcgc gggccttggt cgagtcgccg
     1861 gccttttcgg cggctcgcgc tgcgtccatg gtagcaccca ggcgattggg ctccttcttc
     1921 agcgtcgcct cgaaggcggc gagggcctcc ttggccatgc cactctcgag cagcatttcg
     1981 ccatagagct cgcgcgcggg cttgggcacg cccggcgtca cgggatgctt ctcggtcttg
     2041 tcctcggcgt cggcggcggc actcatcgct gaaagcgcct catcgcgctt gccttcggcg
     2101 tagagcaccc aggcggttgc gatctgcctc tggacatcga cttgcccgga ccagtaggcg
     2161 tccttggcct ggatgagctt gtcctgcaat tcggcgagct tggcgatgtc ggccttggcg
     2221 gcagccggat cgcccgagcg ggcggctccc acggcgcggg caaaataggt gatcgcctgc
     2281 acctgcggca gcgggctggg gcggacttca agggcagccg ctgccttcca gtcgccgcgt
     2341 tccaccgcgt agcgcgccgg cgaagcagcc cgcccatagg gacccggcag ggcgctctcg
     2401 gtgaaggcgg tgaccgtatt catctcgtcg atgacgtcct tagctttctt gtcctgcccg
     2461 agctgcaggt aggcatagac caggtagtcc atggcatgca gctcttcgtg gaaatcgccc
     2521 gcttccttcg cggcacgccc cgaagcgata ttggaatcga tcgactcctg ccaatagccg
     2581 acgcgggtga agatgtgcga cggcatgtgc agggcatgtg gcgcggctgg agcgatcttg
     2641 gcatagcgcc gggcggcttc gatgcctttg tcggcgatcg gcggatagtc gtagagatgg
     2701 atcaggtagt gagccacgcc gggatgctgc ggttggcgct tggcgatcac ttccaggatg
     2761 gccgcgccct tgagctggct ggcgtaggtc ttgtcggccg gcgaagccga ggtgttgagc
     2821 gccagcgcat aatggatctg cgcttcgtcg tcattcggat agcgcgcggc cagctgttcc
     2881 atggccttgg cgtaggccag
//
LOCUS       DASWGA010000299         6288 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_287824, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000299 DASWGA010000000
VERSION     DASWGA010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6288
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287824"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1424
                     /locus_tag="VF991_07220"
     CDS             171..1424
                     /locus_tag="VF991_07220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556267.1"
                     /translation="MNAGHRSVAIRRRSILKAGAAIGALQITSPFIISARGETPVRIG
                     MVDPLTGVYAAIARGEVEGAQLAVDQINKKGGILGRPVELLVEDSANDVGTGVQKTRK
                     LIDRDEVSFIIGDVNSGIALAIAQVTTEKKILHIVSGGHTDPITGSGCAWNVYRVCNS
                     TAMDSNAIADTLIEKFGKKWYFLTPDYAYGHSVQAGLEKKLKAAGGTSAGDLIPIGTV
                     DYSAYLIKAKAFGPQVLINVMGGGDQVNSLKQFVQFGLEKQMAVGGTLFELESLRAVP
                     NEARIGWWTMEWWWDQPNVPEVQAFNAAMKQRTGKAATARNWFGYVSLRTVALLANQE
                     KTLDAVKLARALSGFKLPPEVALQPGSPEYRAGDHELMSTVFVGEAHPPQGDADNMFT
                     VHNPVPGDKAAGPAEGTGCKLQWPA"
     gene            complement(1438..1614)
                     /locus_tag="VF991_07225"
     CDS             complement(1438..1614)
                     /locus_tag="VF991_07225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556268.1"
                     /translation="MLTLLVVLYGDKRRANLPCGERAGRNMIIDAAGSEDFFCSEAIW
                     CEPRATGGAARRPR"
     gene            1613..2875
                     /locus_tag="VF991_07230"
     CDS             1613..2875
                     /locus_tag="VF991_07230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556269.1"
                     /translation="MSRSGISVGIGRRALIRAGAAIGALQVASPFIIQARGETPIKIG
                     MVDPLTGVYAAPAQNEVIGARLAIAEINAKGGILGRPTELLVEDSANDVGTGVQKARK
                     LIDRDEVSFLIGDVNSGVAQAIAQVTNEKRILHIVSGGHTDPITGTDCKWNVFRVCNT
                     TVMETNSVSDLLFKKYGKKWHFITPDYAFGHTLQKGLENNLKRLGGTETGAELTPLGT
                     TDYSAYLIKARAANPDIILLLVQGNDMVNCLKQIVQFGINKQIAVAGAQQELESLAAL
                     PPEARIGNWMFEWYWKQPGVPHVEKFVADIRKQTGGKVPTARHWFGYTSAHTFALVAN
                     REKSLDSIKLARALGDFELPPEVKLQPNKCYYRKGDHQLMTSAFVGEALMQGKDDPED
                     LFHVDQVVPGDKTAPAETETGCKLQWPA"
     gene            2980..3849
                     /locus_tag="VF991_07235"
     CDS             2980..3849
                     /locus_tag="VF991_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556270.1"
                     /translation="MTQLLLFNITNGLIIGAFYVLMALGLSLILNLSGIINFAHGGFL
                     AIGGYFAFTLTPYIGFWGALLVAPLLTAVLGLVIERVLVRRLYGRDPLYSLLLTFGLA
                     FIFQDVTRFIWGAQGLPVSIPAFMGQPLSLDFFFITGYRLFMVSVVGVVVALLFVLLR
                     YTRVGIRIRAGTLDLDTVAALGINVRALRTLNFSIGIFLAGLSGVLAGGQLGLEPTMG
                     DGLLMPSFIAIIVGGVGSLTGTLLGGLLIGVASGVTSVFFPSASEAVMYVMMAAVLLV
                     RPRGLFGEEGMMT"
     gene            3846..4823
                     /locus_tag="VF991_07240"
     CDS             3846..4823
                     /locus_tag="VF991_07240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556271.1"
                     /translation="MSVASLPAARRIAQRPLALALVWLVLLAAPYWMPFLGGYTALGT
                     RVLVLGLAAMSLNFLLGFTGVLSFGHAAYFGLGAYGAGLALKFLTASTPLALILGTLV
                     GGIAGALLGALIVRRRGVYFAMVTIAFGQVFYFIAFRWSSVTGGDDGLRGFSRQPLHL
                     GAFTVDILSNAEAFYYFVLLCFAIAVALMAFLLRSPFGRTLLAIRENERRARFLGIPV
                     ELHIWLAFVISCAFISLAGGLDALLNNFANPHELHYSQSGDLVIMAVMGGMRSFWGPL
                     LGAALFVVLQDYVSSLTTNWMSFIGLLFVLVVLLFPRGLLGFLQRGSDK"
     gene            4820..5569
                     /locus_tag="VF991_07245"
     CDS             4820..5569
                     /locus_tag="VF991_07245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556272.1"
                     /translation="MSLLEVRQVSKSFGSLAAVRDVSLAVQKGELRAVIGPNGAGKTT
                     FFNLISGFFPPTAGSIVFDGADITAMPVHRRVALGMARTFQITEIFPELSVAENVRIS
                     AEVAAGYRLRPWLGRVAATELRARIEEVLGLTGLAAKADRLVGELAHGDQRAAEIAMA
                     LALKPRLLLLDEPTAGMGDQETYETTQLVRRLHRNGNLTIVLIEHDMRVVFHLADRIT
                     VLDQGRLLAEGGPKEIAANEAVQAAYLGKVA"
     gene            5566..>6288
                     /locus_tag="VF991_07250"
     CDS             5566..>6288
                     /locus_tag="VF991_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556273.1"
                     /translation="MTQKARGLALRAEAIHTFYGKSHILHGISLEVAEGRITTLLGRN
                     GAGKTTTLRSLMGLTPARQGRITILGQETTRWPTFRIAALGVGYVPEGRRIFANLSVE
                     ENLKVPLERSGPWSIARIYELFPRLAERRLSRGRQLSGGEQEMLAVGRALLLNPRLLI
                     LDEPSQGLAPLVVREVFRIVAQMRAEGISVLLVEQNARMSLAIADDAFVLDHGSMVYA
                     GPAKELAADEERVQALAGASAEE"
BASE COUNT         1035 a         2176 c         1988 g         1089 t
ORIGIN      
        1 tcgcttgcct gcgcggcctc gccgcaccgt tccgcgtcgg cagctagcgc cgggccggtc
       61 ggcgcgctca actttatggt cgacaaacgc ccgggcgcgc ggaacactcg aagacaaggg
      121 ccacaaaggc ctgcaaaaaa actaccagca atgcttcagg ggaggtcttc atgaatgccg
      181 ggcaccggtc ggtggcgatt cgacgccggt ccatcctcaa ggcaggagcc gccatcggcg
      241 cgctccaaat cacgtccccg ttcatcatct cggcgcgcgg cgagacgccc gtgcgcatcg
      301 gcatggtcga tcccttgacc ggtgtctacg ccgccatcgc ccgtggcgaa gtggaagggg
      361 cgcagctcgc agtcgatcag atcaataaga agggcggcat cctcggccgg ccggtggagc
      421 ttctggtcga ggattccgcc aacgacgtgg gcacaggcgt gcagaagacg cgcaagctca
      481 tcgaccgcga cgaggtcagc ttcatcatcg gcgacgtcaa ttcagggatc gccctggcaa
      541 ttgcccaggt caccaccgag aagaagatcc tgcacatcgt ctccggcggc cacaccgacc
      601 ccatcaccgg gtcgggttgc gcctggaacg tttatcgcgt ctgcaactca accgcgatgg
      661 actccaacgc catcgccgac acgctgatcg agaaattcgg caagaaatgg tatttcctca
      721 cgccggacta cgcctacggc cattccgttc aggccggcct cgaaaagaag ctcaaggcag
      781 ctggcggcac atcggccggc gacctcatcc cgatcggcac ggtcgattac tcggcctacc
      841 tgatcaaagc caaagccttc ggcccacagg tgctcatcaa tgtcatgggc ggcggcgacc
      901 aagtgaacag cctgaagcag ttcgtgcagt tcggcctcga gaagcagatg gccgtgggcg
      961 gcacgctgtt cgagctcgag agcctgcgcg ccgtgcccaa cgaggcccgc atcggctggt
     1021 ggacgatgga atggtggtgg gatcagccca acgtgcctga agtgcaggcc ttcaacgccg
     1081 ccatgaagca gcgcaccggc aaggcggcga cggcgcgcaa ttggttcggc tacgtgtcgc
     1141 tccggaccgt ggcgctgttg gcgaaccagg agaagacgct cgacgcggtc aagctggcgc
     1201 gcgccctatc gggcttcaag ctgccgccgg aggttgcact ccagcccggc agcccggaat
     1261 accgcgccgg cgatcacgaa ctgatgagca ccgtcttcgt cggcgaggcg catccaccgc
     1321 aaggcgacgc ggacaacatg ttcaccgtgc acaacccggt acccggcgac aaggccgcgg
     1381 ggccggcaga aggaaccggc tgcaagctgc aatggccggc gtgagcgcga tggcacgcta
     1441 gcgcgggcga cgggcggcgc cgcccgtcgc ccgcggctcg caccagattg cctcgctgca
     1501 gaaaaaatct tccgatccgg cggcatcgat gatcatattg cggcccgcgc gctcgccgca
     1561 tggtaaattc gcgcggcgct tgtcgccata aagcaccacg aggagggtaa gcatgtcacg
     1621 gagtgggatc tcggtcggta tcggtcggcg cgcgctgatc agggcgggcg ccgctatcgg
     1681 cgcgctgcag gttgcttcgc cgttcatcat ccaggcgcgc ggcgagacgc caatcaagat
     1741 cggcatggtc gacccgttga ccggcgtcta tgccgccccg gcccagaacg aggtgatcgg
     1801 cgccaggctg gccatcgccg agatcaacgc caagggcggc attctcggcc gcccgaccga
     1861 actgctcgtc gaggactccg ccaatgacgt gggcaccggc gtccagaagg cgcgcaagct
     1921 catcgaccgc gacgaggtga gtttcctcat cggcgacgtc aattccggcg ttgcccaggc
     1981 gatcgcgcag gtcaccaacg agaagcgcat cctgcacatc gtctcgggcg gccacaccga
     2041 cccgatcacc ggcaccgact gcaaatggaa cgtgttccgc gtctgcaaca cgacggtgat
     2101 ggagacgaac tctgtctccg atctgctgtt caagaaatac ggcaagaagt ggcacttcat
     2161 cacgccggac tacgccttcg gccacacgct gcagaagggg ctcgagaaca atctgaagcg
     2221 cctcggcggc acggagaccg gcgccgagct tacgccgctc ggcaccaccg actattccgc
     2281 gtacctcatc aaggcgcgcg ccgccaatcc ggacatcatc ctgctgctgg tgcagggcaa
     2341 cgacatggtc aattgcctga agcagatcgt ccagttcggc atcaacaagc agatcgccgt
     2401 ggccggcgcg cagcaggagc tggaatcgct ggcggcgctg ccgcccgagg cgcgcatcgg
     2461 caactggatg ttcgagtggt attggaagca gccgggcgtg ccgcatgtcg agaaattcgt
     2521 cgccgacatc cgcaagcaga ccggcggcaa ggtgccgacg gcacgccatt ggttcggcta
     2581 tacctcggcg cacaccttcg cgctcgtcgc caaccgggag aaatcactcg attcgatcaa
     2641 gcttgcccgg gcgctcggcg atttcgagct gccgcccgaa gtgaagctgc agccgaacaa
     2701 gtgctactac cgcaagggcg accaccagct gatgacctcg gccttcgtcg gcgaggcgct
     2761 gatgcagggc aaggacgatc ccgaggacct cttccacgtc gatcaagtcg tgcccggcga
     2821 caagacggcc ccggccgaga cagaaaccgg ctgcaagctg cagtggcctg cctgacccat
     2881 cgccagcaga cgcgagaccg tgcttatccg gacggaagcg cgcggttccc cagaccgcgc
     2941 gctttcctct ccgcctcggg cgcgccagga ccttagccca tgacgcaact gcttctcttc
     3001 aacatcacca acgggctcat catcggcgcc ttttacgtgc tgatggcgct ggggttatcg
     3061 ctcattctca atctgagcgg catcatcaac ttcgcccatg gcggcttcct cgccatcggc
     3121 ggctatttcg ccttcaccct cacgccttac atcggcttct ggggcgcgct tctcgtcgcg
     3181 ccgctcctca ccgccgtact cggcctcgtc atcgagcgcg tgctcgtccg ccggctgtat
     3241 gggcgcgacc ccctctacag cctgctcctt actttcggcc tcgccttcat cttccaggat
     3301 gtgacccgct tcatctgggg cgcgcaaggc ctgcccgtct cgatccccgc cttcatgggg
     3361 cagccgctca gcctcgattt cttcttcatc actggctacc gcctgttcat ggtcagcgtc
     3421 gtcggcgtgg tcgtggccct gctgttcgtg ctgctgcgct ataccagggt cggcatccgc
     3481 atccgcgccg gcacgctcga cctcgatacc gtggcggcgc tcggcatcaa tgtgcgggcg
     3541 ctgcgcaccc tgaatttctc catcggcatc ttcctcgccg gcctgagcgg cgtgctcgcc
     3601 ggcggccagc tcgggctcga gcccaccatg ggcgacggcc tcctcatgcc gagcttcatt
     3661 gccatcatcg tcggcggcgt cggcagcctc accgggacgc tgctcggcgg cttgctcata
     3721 ggcgtcgcca gcggcgtgac cagcgtgttc ttcccgtcgg cgagcgaggc ggtgatgtat
     3781 gtgatgatgg ccgcggtcct gctggtgcgc ccgcgcggcc tcttcggcga ggaagggatg
     3841 atgacatgag cgtcgcgagc ctgccggcgg cgcggcgcat cgcccagcgg ccgctcgccc
     3901 tggcgctggt ctggctggtg ctgctcgccg cgccctactg gatgcccttc ctcggcggct
     3961 ataccgcgct cggcacgcgc gtgctggtgc tggggttggc cgccatgtcg ctcaatttcc
     4021 tgctcggctt caccggcgtc ctgtccttcg ggcacgccgc ctatttcggc ctgggcgcct
     4081 atggcgccgg cctcgccttg aagttcctga ccgccagcac gccgctggcg ctcatcctcg
     4141 gcacgctggt cggcggcatc gccggcgcgc tcctcggtgc gctcatcgtg cggcggcggg
     4201 gcgtctattt cgcgatggta accattgctt tcggtcaggt cttctatttc atcgccttcc
     4261 gctggagctc cgtgaccggc ggcgatgacg ggttgcgcgg cttctcgcgc cagccgctgc
     4321 acctgggcgc cttcaccgtc gatatcctaa gcaatgccga ggcgttctat tatttcgtgc
     4381 tgctgtgctt cgcgatcgcc gtcgccctca tggcattcct gctgcgctcg cccttcggcc
     4441 gcacccttct cgccatccgc gagaacgagc ggcgcgcgcg cttcctcggc atccccgtcg
     4501 agctgcacat ctggcttgcc ttcgtcatct cctgcgcctt catcagcctc gccggcgggc
     4561 tcgatgcgct gctcaacaat ttcgccaacc cgcacgaact ccattacagc cagtccggcg
     4621 acctcgtcat catggcggtg atgggcggca tgcgcagctt ctggggcccg ctgctcggtg
     4681 ccgccctctt cgtggtgctg caggattacg tctcgagcct caccaccaat tggatgtcgt
     4741 tcatcggcct gctcttcgtc ttggtggtgc tgctcttccc gcgcggcctc ctgggatttc
     4801 tgcaacgcgg gagcgacaaa tgagcctgct cgaggtcagg caggtgtcca agagcttcgg
     4861 cagcctggcc gcggtgcgcg atgtgtcgct cgccgtccag aagggcgagc tgcgcgccgt
     4921 gatcggaccg aacggcgcgg gcaagaccac cttcttcaat ctcatcagcg gcttctttcc
     4981 gccgactgcc ggatcgatcg ttttcgatgg cgccgacatc acggcgatgc cggtgcatcg
     5041 ccgcgtggcg ctgggcatgg cgcgcacctt ccagataacc gaaatctttc ccgagctgtc
     5101 ggtggcagaa aacgtgcgca tcagcgccga agtcgccgcc ggctatcgcc tgcgcccctg
     5161 gctcggccgc gtcgcggcaa ccgagctgcg cgcacgcatc gaagaggtat tgggactgac
     5221 cgggctcgcc gccaaggccg accggctggt gggcgaactc gcccatggcg accagcgcgc
     5281 cgccgagatc gccatggcgt tggcgctcaa gccgcgcctg ttgctgctgg acgagccgac
     5341 cgccggcatg ggcgaccagg agacttacga gaccacgcag ctggtgcggc gcctccatcg
     5401 caacggcaac ctcaccatcg ttctgatcga gcacgacatg cgcgtcgtgt ttcacctcgc
     5461 cgaccgcatc accgtgctcg atcagggccg gctgctggcc gagggcggcc ccaaggagat
     5521 cgccgccaac gaggcggtgc aggcggccta tctgggcaag gtcgcatgac ccagaaagcc
     5581 aggggcttgg cgctccgcgc cgaggccatc cacaccttct acggcaagag ccacatcctc
     5641 cacggcatca gcctcgaggt cgccgagggc cgcatcacca cgcttttggg gcgcaacggc
     5701 gccggcaaga cgacgacgct gcggagcctc atggggctga cgccggcgcg ccaggggcgc
     5761 atcacaatct tgggccagga aacaacgcgc tggccgacat tccgcatcgc cgcgctgggc
     5821 gtgggctatg tgccggaggg ccgccgcatc ttcgccaacc tcagcgtcga ggagaacctc
     5881 aaggtgccgc tcgagcgcag cggtccatgg tcgatcgccc gcatctatga gctcttcccg
     5941 cgcctcgccg aacgccggct gagccgcggc cgacagctct ccgggggcga gcaggagatg
     6001 ctggcggtcg gccgggcgct gctgctcaac ccgaggctgc tgatcctcga cgagccatcg
     6061 caggggctgg cgccgctggt ggtgcgcgag gtgttccgca tcgttgcgca aatgcgcgcg
     6121 gagggcatct cggtcctgct ggtcgaacag aacgcgcgca tgagcctcgc catcgccgac
     6181 gatgccttcg tgctcgacca cggcagcatg gtctatgccg gccccgccaa agagctcgcc
     6241 gccgatgagg agcgcgtcca ggcgctggcc ggcgccagcg ccgaagaa
//
LOCUS       DASWGA010000300        13984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1556484, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000300 DASWGA010000000
VERSION     DASWGA010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 13984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13984
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556484"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VF991_07255"
     CDS             complement(<1..206)
                     /locus_tag="VF991_07255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556274.1"
                     /translation="MASIEAFEVRPIDADQCEAVWPLSIEAGWNQNVADWRFMLGAGR
                     GFGCATPDGTWQASALVLPLGQKLA"
     gene            complement(193..1218)
                     /locus_tag="VF991_07260"
     CDS             complement(193..1218)
                     /locus_tag="VF991_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9556275.1"
                     /translation="MTLPVRFDSIEAVEDLLTTPSAALVADLARTPGDIIVLGVGGKM
                     GPTLARLAKRAAPAKRVMGVARFSEPGVREALAAAGVEPISADLLDRAALEKLPKAAN
                     VVFMAGRKFGATGNVPLTWAMNVQVPAMVAEVFKASRIVVFSTGCVYPFVPVASGGAS
                     EDVPAVPPPGDYANSCVGREHMFEYFSARHGTPGRLFRLNYAIDMRYGVLHDVGRKVR
                     DGEPIDLAMGHVNVIWQGDANSVALRCLAHATTPTTPINVTGPETIEIRWLAVEFGRL
                     LGKAAKLTGQEAPTGWLNDSSRMAKEFGPPAVPLAKMIEWTADWLARDMATLDKPTHY
                     EVRDGKY"
     gene            complement(1215..2639)
                     /locus_tag="VF991_07265"
     CDS             complement(1215..2639)
                     /locus_tag="VF991_07265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase"
                     /protein_id="HEX9556276.1"
                     /translation="MKVKLEEVERYERHVKMRLAFRFGVITVTEATQAVIRVRLSLPD
                     GRTSHGVAAEALAAKWFEKSPEFTDAQNLDQLRQSLDLAIELYRAQGFDRPFDLFAGT
                     YAEQRKRAAALGLNPLVACYGPALLDRAILDALGRATGQSFANMITSNMPGIRATSLT
                     PDIEDAALAPFLAGLKPAPHIDVRHTVGLVDPLTASDRPAAERVNDGLPETLEEVVSY
                     YRGRYYKLKVAGDVKADLDRLGRIAAVLDAGAGDYRVTLDGNEQYDDVEGIVELWRKV
                     EDTPALARLAKSTLFIEQPIKRAVALSRPVEPLARLRPVIIDESDAELSSFPMALKLG
                     YAGVSSKNCKGFYKSILNAARVARLGAGHFMSAEDLTTWPGVSVQQDLALVSLLGLTH
                     VERNAHHFIDGMSFAPEAEQKAFVAAHPDLYEKQSGKPARLKARGGKLPLGSLGVAGF
                     AVGADMEFSSMKPMASDAKSGAPT"
     gene            complement(2636..3454)
                     /locus_tag="VF991_07270"
     CDS             complement(2636..3454)
                     /locus_tag="VF991_07270"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HEX9556277.1"
                     /translation="MKLSLCNEVIRELPFERQCGLAAGLGYRGLELAPFTFGDDAWRM
                     PAAKRVEVRRVCADAGIEVSGLHWLLAAPAGLSITTSDRTVWQKSVDVLRASVDLCAE
                     LGGAYLVHGSPAQRRVATPDDASRAEEAWILAAEQAAAARVAYCIEPLAKPDCNFVNT
                     LAEAAEIARRVGNPALRIMVDTLAAGLMESEPVADAIQRWMPTGLVAHIQFNDRSRRG
                     PGQGDDKFAPIVRALRETGYGGWIAMEPFVYEPDGPTCAARMIGYVAGLLEPRA"
     gene            3564..4331
                     /locus_tag="VF991_07275"
     CDS             3564..4331
                     /locus_tag="VF991_07275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556278.1"
                     /translation="MTKFSALSRQYWPTLVLFAVLLASWQLAVSLGGIREYLLPAPSS
                     VWTALWHGDTQWEQHLWTTTFEIIGAFFLAAGVGVALGVAIAWSPLMANALVPFLVFV
                     NTLPKVAIAPLFLIWMGYGIFPNMLMGALIGFFPVVINTAVGLSQVEADMLDLGRVFN
                     APKWKIFLKIRIPNALPYILSALKITATAAVVGAIVGEFVASQKGLGYVIVTTQSSMN
                     TSVAFAALIWISVVGLVLYGAVVLAARLWAPWAEGID"
     gene            4363..5349
                     /locus_tag="VF991_07280"
     CDS             4363..5349
                     /locus_tag="VF991_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556279.1"
                     /translation="MTRTISLALAALLAASGGAAAQEKFTFALNWFAVGDHAAYWVAL
                     DKGYYKAKGLDVTLENSKGSGDSIAKVDTGRADAGLADAAVVISSVGRGTTIKTVGMV
                     FDKTPLNIFSLKSSPLAKPKDVEGKTLGAPPGDSQRQMFPAFAKVNGIDAAKVTWVNI
                     EPTAKIAAVAEKRMDGVGDYSTGLPLYEKAAGKGNVVMMPWADFGFDMYSISIIASAK
                     TMKERPAVLKAFLEASYMGWRDVMADPKGSMEIFKKRVPEVDVETMTPNMLIGLDLMK
                     TERYAKNGIGWIDEKKMCDSVDLVNTYMGLPKKVECKDVFTIDFLTKVEMPK"
     gene            5357..6157
                     /locus_tag="VF991_07285"
     CDS             5357..6157
                     /locus_tag="VF991_07285"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556280.1"
                     /translation="MDREQIGLDRVGMTYEAASGPVEALAGISLSVGAGEFVSLVGPS
                     GCGKSTLLRIVAGLRPATEGAVRVGGNIVRAPIADVGMVFQAPILLKWRSIVQNVLLP
                     AELAGKDVRALRKRAAQLLDMAGLAGFGNKLPRELSGGMQQRAALCRALLLDPPLLLM
                     DEPFGALDAMTRDDMALELLRIWGERDLARQARKTVLFVTHSISEAVFLSDRVVVMSP
                     RPGRVVLDLRIDLPRPRTVELRASEVFGRLSLDIFRALAGRPTVAAGA"
     gene            6252..6551
                     /locus_tag="VF991_07290"
     CDS             6252..6551
                     /locus_tag="VF991_07290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007693835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HEX9556281.1"
                     /translation="MRMAKPSHPGRFIRAEIVEPHGLSVTDAAKVLGVTRPALSALFN
                     GRAALSAEMALRVEKAFGVSMDTLLRMQTSYEIAETRRKASRIRVKPFAPRKMAA"
     gene            6604..7839
                     /locus_tag="VF991_07295"
     CDS             6604..7839
                     /locus_tag="VF991_07295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX9556282.1"
                     /translation="MSLAATPIKSAAKGISADAKPFDWEDPFFLDDQLTEEEIAIRDA
                     ARDYCQDKLMPRVLEANRHEKFDREIMNEMGALGLLGSTLPEKYGCAGANYTTYGLVA
                     REVERVDSGYRSAMSVQSSLVMHPIYAYGTEDQRQKYLPKLASGEWVGCFGLTEPDHG
                     SDPGSMSTRAVSVAGGYKLSGSKMWITNSPIADVLVIWAKLDGGAIRGFVLERAWKGI
                     ATPKIEGKFSLRASVTGAIMLDEVFVPAENLLPNAAGLGGPFGCLNNARYGIAWGALG
                     AAEFCWKQARNYTLDRKQFGRPLAANQLIQKKLADMQTEIAVGLQACLRVGRLKDQGH
                     AQPEMISLIKRNSCGKALDIARVARDMHGGNGVSDEYHVIRHVMNLEAVNTYEGTHDV
                     HALILGRAMTGIQAFTAGG"
     gene            7873..8589
                     /locus_tag="VF991_07300"
     CDS             7873..8589
                     /locus_tag="VF991_07300"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9556283.1"
                     /translation="MVVAGALAAGFVHGLSGTGYALVALGFWLQAMSPVTAAPLVALC
                     SVCAHVQALPAIWRGVRWSRLWPFLAAGLLGVPLGTMLLEHVRVQPLKLGVGLLLIFY
                     SAWMGLVRRPPIVTGGGRPADAVVGFIGGVMGGMASLSGPAPTIWLQLRGWTKGEQRG
                     VNQPFNMAVLATALLSAAVAGLLDRTFLVWAAIALPASLIGAWIGLVVYGRIDDTGFR
                     RIVLILLILSGAALIVSALR"
     gene            8586..9443
                     /locus_tag="VF991_07305"
     CDS             8586..9443
                     /locus_tag="VF991_07305"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX9556284.1"
                     /translation="MKLNTFAVTFVAGCAAIAIAVLALHKPEATPPTGNAPTAPPATW
                     PDYSVNGPGFITPAVADGELIAYGYRLVSQTFATIGPEVGDPAMRFAGNNLACQNCHL
                     DGGTSRNGLPLVGLFKTFPKFSPRDQRVVTLPERLDECMTRSMNGRKLPDESREMSAL
                     LAYMRFIGEPPPVESEPAPAAPLPADAGRGAEVFATVCAVCHQANGLGQRMGSPGNAR
                     GYLFPPLWGPDSFNDGAGMDQYRNIVGFVRRNMPRGVDPQHPQLSLQQAWDVASYVQS
                     MPRPHDNQR"
     gene            complement(9523..10527)
                     /locus_tag="VF991_07310"
     CDS             complement(9523..10527)
                     /locus_tag="VF991_07310"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9556285.1"
                     /translation="MSTYRIFGSELSPYSVKVRSYFRYKNFAHEWIPRSPAVQAEFQK
                     YAKLPLVPLVVTPEGEGVQDSTPIIERFEASQAEPSIVPQDPALAFVSALLEEYGDEW
                     GNKWMFHYRWRYPPDAWSTAERIAQQMMGAQGPLAVAQARAAVAERMTGRLGFVGSND
                     RTQPTIEASFKRVLGLLEAHLQARPYMLGGRPAMADFGLWGQLYEAATDPTPGALMRT
                     SSPKVMAWVQRMLSPKAEGPFEPWTALAPSLMPLLTQEVGGLFLPWSAANAAALSRGD
                     KSFEMTLGGAPWSQEPQKYHARSLAEIRRKYAAAKGSPGLKAILDESGCLPYLSSRAG
                     "
     gene            complement(10535..11602)
                     /gene="corA"
                     /locus_tag="VF991_07315"
     CDS             complement(10535..11602)
                     /gene="corA"
                     /locus_tag="VF991_07315"
                     /inference="COORDINATES: protein motif:HMM:TIGR00383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015087 - cobalt ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006824 - cobalt ion transport [Evidence
                     IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HEX9556286.1"
                     /translation="MDALVHRHTKPGTAPGTLAGRAPVPDEALDFTLVEYTSEDVQVL
                     HGVEVDECRFHLGTPGHTWIDVAGRPSSDMLRDLGMAFNLHPLALEDVFHGHQRSKLD
                     LYEGQGFIVLNDPVYDGGELLSRQVNIFFGENYVISFHDHKLDIFKPVRDRLQTAGSR
                     LRTFGIDYLVYALIDLVVDRKFPLIEALSSHLEELEDEALGHPTHDTLNHIHQARRAL
                     VAFHRIEWAERETVLAVMRPEVPVIMPETRTYLRDCFDHAVAVLDLVESYREMTNGLM
                     EVYLMHASNRMAEVMKTMAIITVFFMPLSFLAGIYGMNFERGVGNMPELGWKYGYAFF
                     WIIVVVIVGGLFIWLKRKRWI"
     gene            complement(11627..11911)
                     /locus_tag="VF991_07320"
     CDS             complement(11627..11911)
                     /locus_tag="VF991_07320"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HEX9556287.1"
                     /translation="MIGVIAKLTIKPGTNADFEATMKALQGKVRADEPGNKLYALHKT
                     ADVNVYVMLERYDDQAALDAHRAAPHYKEIGRKLGDYLAGRPDVQIMQEV"
     gene            complement(11932..12408)
                     /locus_tag="VF991_07325"
     CDS             complement(11932..12408)
                     /locus_tag="VF991_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX9556288.1"
                     /translation="MGQFKPEEHRFGPTHWFEDLKVGQTFYINSRTQTEALFAAFQTA
                     SGDNHPIHYDREYCKARGHRDLLAHGLQVAIQGAAGAGIFPHVIGDSLVGFLEQSSRF
                     LKPVYCGDTLYPLLEVSELKAGRATGVVVLKLTIHNQKGELVCDGEHKYLVKKRPQ"
     gene            complement(12454..13068)
                     /locus_tag="VF991_07330"
     CDS             complement(12454..13068)
                     /locus_tag="VF991_07330"
                     /inference="COORDINATES: protein motif:HMM:TIGR01493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX9556289.1"
                     /translation="MKYDAVVFDLLTALIDSWTLWNDVAGSPDAGLAWRRRYLEITYG
                     SGAYRPYETLVRDAARDVGLPQSLGDDLDKRWDELKPWPEAREVLKRLSVPMAVATNC
                     SIRLGGRAADRVGVPFKVVVTAESVGFYKPRPEPYRAVLAALGTAPERTLFVAGSASD
                     VPGAKGVGMPVYWHNRIGLPPRDDSRPDYLEATLDKLGDLFPLA"
     gene            complement(13065..13751)
                     /locus_tag="VF991_07335"
     CDS             complement(13065..13751)
                     /locus_tag="VF991_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9556290.1"
                     /translation="MITLYDLVFQEDRRPSPFCWRAKFALKHKGLDWRDEPTGFTEKH
                     KIAFAQSQTVPVIHDGTKVVKDSWAIATYLDQAYADKPLFKSEMAVSYARFVAGWVDT
                     AVQAALFPIVVGDLYDRVRPADQPYFRESRGKRLGTTDFAGFQAKARDKGVAAFRSVL
                     EPARRIVREQKFLAGEHPAYPDYALAGAFLWARVASPFELLEPDDPVHAWRERMLDLF
                     DGMGRKAKAA"
     gene            complement(13759..>13984)
                     /locus_tag="VF991_07340"
     CDS             complement(13759..>13984)
                     /locus_tag="VF991_07340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003574739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEX9556291.1"
                     /translation="VPGPVPTSPANRDYQAGFTAAMMLKDLMLAQQAANAAGASTPLG
                     AEAAQLFNLFVNSGNGAKDFSGIIRMLDGK"
BASE COUNT         2291 a         4694 c         4652 g         2347 t
ORIGIN      
        1 gcaagctttt ggccgagcgg caggaccagc gcactcgcct gccatgtgcc gtccggtgtc
       61 gcgcacccga agccgcggcc ggcgcccagc atgaagcgcc agtcggcgac gttctggttc
      121 catcccgcct cgatcgacaa cggccacacg gcttcgcatt ggtcggcgtc gatcggcctc
      181 acctcgaacg cctcaatact tgccatcgcg cacctcgtag tgcgtcggct tgtccagggt
      241 ggccatgtcg cgggcgagcc agtcggcggt ccattcgatc attttcgcca gtggcacggc
      301 gggcggcccg aactccttcg ccatgcggct ggaatcgttc agccagccgg tcggcgcctc
      361 ctgccccgtg agcttggccg ccttgcccaa aagcctgccg aactcgacgg cgagccagcg
      421 gatctcgatg gtctcaggcc cggtgacgtt gatcggcgtc gtgggcgtcg tggcatgcgc
      481 aaggcagcgc agcgccaccg aattggcgtc gccctgccag atcacgttga catggcccat
      541 ggcgaggtcg atcggctcgc cgtccctcac cttgcggccg acgtcgtgca gcacgccgta
      601 gcgcatgtcg atggcgtagt tcagccggaa caggcggccc ggcgtgccgt gccgggcgga
      661 gaagtattcg aacatgtgct cgcggccgac gcaggaattg gcgtagtcgc caggcggcgg
      721 cacagccggc acgtcctcgc tcgcgccgcc gctggcaacc ggcacgaagg gataaacgca
      781 gccggtcgag aagacgacga tgcgcgaggc cttgaagacc tccgccacca tcgccggcac
      841 ctgcacgttc atcgcccagg tgagcggcac gttgccggtg gcgccaaatt tgcggccggc
      901 catgaacacg acgttggcgg ccttgggcag tttctccagc gcggcgcgat ccaacaggtc
      961 ggcggaaatc ggctcgacgc ccgccgccgc cagcgcctcg cgcacaccgg gctcgctgaa
     1021 gcgcgcgacg cccatcacgc gcttggcggg cgcggcccgc ttggccaggc gcgccagggt
     1081 gggccccatc ttgccgccaa cacccagcac gatgatgtcg cccggcgtcc ttgcaagatc
     1141 ggcaaccaac gcagccgacg gcgtcgtcaa taaatcctcg acggcctcga tactgtcgaa
     1201 ccggacgggc agcgtcatgt cggagctcca ctcttggcgt cacttgccat cggcttcatc
     1261 gagctgaact ccatatcggc gccgacggca aatccggcca cgccgagcga gcccaggggg
     1321 agcttgccgc cgcgtgcctt gagccgtgcc ggcttgccgc tctgcttctc gtagaggtcg
     1381 ggatgcgccg cgacgaaggc cttctgctcg gcttccggcg cgaagctcat gccgtcgatg
     1441 aaatgatggg cgttgcgctc gacgtgcgtc aggccaagca gcgacaccag cgccaggtcc
     1501 tgctggacgc tgacgccggg ccaggtcgtg agatcctcag ccgacatgaa atgaccggcg
     1561 cccagcctgg ctacccgggc ggcattgagg atcgacttgt agaagccctt gcagttcttg
     1621 ctcgatacgc cggcatagcc gagcttcaat gccatcggga acgacgacag ctcggcatcc
     1681 gactcgtcga tgatgaccgg cctcagccgg gccagcggct cgaccggccg cgacagcgca
     1741 acggcgcgct tgatcggctg ctcgatgaac agggtcgact tggcgagcct ggccagcgcc
     1801 ggcgtgtcct cgaccttgcg ccacagttcg acgatgccct cgacgtcgtc gtactgctcg
     1861 ttgccgtcga gcgtgacacg atagtcgccg gccccggcat cgagcacggc ggcgatgcgg
     1921 ccgagccggt cgaggtcggc tttgacgtcg cccgccacct tcagcttgta gtaacggccg
     1981 cgatagtagg agacgacctc ctccagcgtc tcgggcaggc cgtcattgac tcgttccgcg
     2041 gccggccggt ccgacgccgt gaggggatcg accaggccca ccgtgtggcg aacgtcgatg
     2101 tgaggggccg gcttcaggcc ggcgaggaac ggcgccagtg ccgcatcctc gatgtcgggt
     2161 gtcagcgacg tcgcgcggat gcccggcatg ttgctcgtga tcatgttggc gaacgactgg
     2221 cccgttgcgc ggcccaatgc gtccaggatg gcgcgatcga gcaacgccgg tccgtagcac
     2281 gccaccagtg gattgagtcc cagcgccgcg gcgcgcttgc gttgctcggc atacgtgccg
     2341 gcgaacaggt cgaagggcct gtcgaaaccc tgggcgcgat agagctcgat ggcgaggtcg
     2401 agcgactgac ggagctggtc gagattctgg gcgtcggtga attcaggact cttctcgaac
     2461 catttggcgg ccagcgcctc ggccgccacg ccatggctgg tccgcccatc cggcaatgag
     2521 agacgcaccc tgatcaccgc ctgcgtcgcc tcggtgacgg tgatcacgcc gaagcggaaa
     2581 gcgagccgca tcttcacatg ccgctcgtag cgctccactt cctcgagctt caccttcatg
     2641 cccttggctc cagcaaaccg gcaacatagc cgatcatgcg cgcggcgcag gtcggcccgt
     2701 cgggttcata gacgaacggc tccatggcga tccagccgcc atagccggtt tcgcgaagcg
     2761 cacgcacgat cggtgcgaac ttgtcgtcgc cctgccccgg gccgcgccgg ctgcggtcgt
     2821 tgaactggat gtgggccaca aggccggtcg gcatccagcg ctggatggcg tcggccaccg
     2881 gctctgattc catcaggccg gcggccagcg tgtcgaccat gatgcgcagc gccggattgc
     2941 cgacgcgccg ggctatctcg gctgcctcgg cgagcgtgtt gacgaaattg cagtcgggct
     3001 tggccagcgg ctcgatgcag taggccactc tggccgccgc cgcctgctcg gccgccagga
     3061 tccaggcttc ctcggcgcgc gaggcatcgt cgggcgtcgc cacacggcgc tgcgccggcg
     3121 agccgtgcac cagataggcg ccacccagct cggcacagag atcgaccgag gcacgcaaca
     3181 catcgacgct cttctgccag accgtgcgat cggacgtggt gatcgacagt ccggcgggag
     3241 cggccaacag ccagtgcagc ccgctcacct cgatgccggc atcggcacag acccggcgga
     3301 cctcgacacg cttggccgcc ggcatgcgcc aggcatcgtc gccgaaggta aagggcgcca
     3361 gctcgagccc gcgatagccg agacccgccg ccaagccaca ctgacgctcg aagggaagct
     3421 cgcggatcac ctcgttgcac aaagaaagct tcaccgatga tcctcatcct tgacgggcaa
     3481 atccgcgttc gtcagtctga ctgaaatgcg ggggatgata tcagcgggat gaaagcgatg
     3541 aacaggttcg tcgctcggcg cgcatgacga aattctcggc cctcagccgg caatactggc
     3601 cgaccctcgt gctgttcgcc gtcctgctcg caagttggca gctggccgtg agcctgggcg
     3661 gcatccgcga atacctgctg cccgcgccca gctcggtttg gaccgcgctg tggcatggcg
     3721 acactcagtg ggagcagcat ctctggacca cgacgttcga gatcatcggc gccttcttcc
     3781 tggcggccgg cgtcggcgtg gcactgggtg tggccatcgc ctggtcgccg ctgatggcca
     3841 atgcgctggt gcccttcctg gtgttcgtca acaccctgcc caaggtcgcg atcgcgcccc
     3901 tgttcctgat ctggatgggc tacggcatct ttcccaacat gctgatgggg gcgctgatcg
     3961 gcttcttccc ggtggtgatc aacaccgcgg tgggcttgag ccaggtcgag gccgacatgc
     4021 tcgatctcgg ccgcgtgttc aacgcgccca agtggaagat ctttttgaag atccgcatcc
     4081 ccaacgccct gccctacatc ctgagcgcgc tgaaaatcac cgcgacagcg gccgtggtcg
     4141 gcgccatcgt cggcgagttc gtcgcctcgc agaagggcct gggctacgtc atcgtcacca
     4201 ctcagagcag catgaacacc tcggtggcgt tcgccgcgct gatctggatt tccgtcgtcg
     4261 ggctcgtgct ctacggcgcc gtcgtgctgg cggcgcgtct gtgggcgccg tgggccgagg
     4321 gcatcgactg atctgaacgg ggaagggaaa agggagcaca tcatgactcg cacaatctca
     4381 ctggcgctgg ccgcgctgtt ggcggccagc ggcggcgccg cggcgcagga gaaattcacc
     4441 tttgcgctca actggttcgc cgtcggcgac cacgcggcct attgggtggc gctcgacaag
     4501 ggttactaca aagccaaggg cctcgacgtc accttggaga actccaaggg ctcgggcgat
     4561 tcgatcgcca aggtcgatac cggccgcgcc gacgcagggc tggccgacgc cgcggtggtg
     4621 atctcctcgg tcggccgcgg caccaccatc aagacggtgg gcatggtgtt cgacaagacg
     4681 ccgctcaaca tcttcagcct caagagcagc ccgctcgcca agcccaagga cgtcgagggc
     4741 aagacgctgg gcgcccctcc gggcgacagc cagcgccaga tgttcccggc cttcgccaag
     4801 gtgaacggca tcgacgccgc caaggtcacc tgggtcaata tcgagcccac cgccaagatc
     4861 gccgcggtgg ccgagaagcg catggacggc gtcggcgact actcgaccgg cctgccgctt
     4921 tacgagaagg cggccggcaa gggcaacgtg gtgatgatgc cgtgggccga tttcggcttc
     4981 gacatgtact cgatatcgat catcgccagc gccaagacca tgaaggagcg tccggccgtg
     5041 ctgaaagcgt tcctcgaagc atcctacatg ggctggcgtg acgtgatggc cgatcccaaa
     5101 ggctcgatgg agatcttcaa gaagcgcgtg ccggaggtcg atgtcgaaac catgacgccc
     5161 aacatgctga tcgggctcga cctgatgaag accgagcgct acgccaagaa cggcattggc
     5221 tggatcgacg agaagaagat gtgcgattcg gtcgacctgg tgaacaccta catgggcctg
     5281 cccaagaagg tcgaatgcaa ggacgtcttc accatcgact tcctcaccaa ggtcgagatg
     5341 cccaaataga ccaggcgtgg accgcgaaca gatcggcctc gaccgggtcg gcatgacata
     5401 cgaggcggcg agcggcccgg tcgaggccct cgccggcatc tcgctgtcgg tcggcgcggg
     5461 cgagttcgtc tcgctggtgg gcccgagcgg ctgcggcaag tccaccttgc tgcgcatcgt
     5521 ggccgggctc aggcccgcca ccgagggcgc ggtgcgggtc ggcggcaaca tcgtgcgggc
     5581 gcccattgcc gacgtcggca tggtcttcca ggcgccgatc ctgctgaaat ggcgctcgat
     5641 cgtgcagaac gtgctgctgc cggccgagct cgccggaaaa gacgtccgcg ccttgcgaaa
     5701 acgcgcggct cagctcctcg acatggccgg gcttgccggt ttcggcaaca agctgccgcg
     5761 cgagctgtcg ggcggcatgc agcagcgcgc cgcgctttgc cgcgccctgc tgctcgatcc
     5821 gccgctcttg ctgatggacg agccgttcgg cgccctcgat gccatgaccc gcgacgacat
     5881 ggcgctcgag ctgttgcgca tctggggcga acgcgacctg gcgcgccagg cgcgcaagac
     5941 ggtgctgttc gtcacccatt cgatctccga ggcggtgttc ctgtccgatc gcgtggtggt
     6001 catgtcgccc cgccccggcc gcgtcgtgtt ggacctcagg atcgaccttc ctcgacccag
     6061 aacggttgaa ctgcgtgcgt cagaggtctt cggccggctc agcctcgata ttttccgcgc
     6121 cctggcgggg cggccgacgg ttgcggcagg cgcttgacgc cacgtcctac tgtcttgcgt
     6181 aacttgacgg gctacgaagg aaggcgagat cgtcgatcta gacttcgagg acgatcacta
     6241 gggagtgcat catgcgcatg gccaagccgt cccatcccgg tcgtttcatc cgcgccgaga
     6301 tcgtcgagcc gcacgggctg tcggtcaccg atgctgccaa ggtgctgggc gtcacccgtc
     6361 cggccctttc cgccctgttc aacggtcggg ccgccctgtc ggcggagatg gcgttacggg
     6421 tcgaaaaggc tttcggcgtc agcatggaca cgctgctgcg catgcagact tcctacgaaa
     6481 tcgccgaaac ccgccgcaaa gcctcgcgca ttcgcgtcaa accctttgcg cccaggaaaa
     6541 tggcggcata gacgctgggc gccatcgcct gataagacgc ggcagacaac gccaggagga
     6601 gtcatgtccc tcgccgccac gccgatcaag agcgccgcca agggcatcag cgccgacgcc
     6661 aagccgttcg actgggagga tccgttcttc ctcgacgacc agctcaccga ggaggagatc
     6721 gcgatccgcg atgcggcgcg cgactactgc caggacaagc tgatgccgcg cgtgctcgag
     6781 gccaaccggc acgagaagtt cgaccgcgag atcatgaacg agatgggcgc gctcggcctt
     6841 ttgggctcga cgttgccgga gaaatacggc tgcgccggcg ccaactacac gacctacggc
     6901 ctggtggcgc gcgaggtcga gcgggtggat tcgggctacc gctcggcgat gagcgtgcag
     6961 tcctcgctgg tcatgcatcc gatctacgcc tacggcaccg aggaccagcg ccagaaatat
     7021 ctgcccaagc tcgcgtcagg cgaatgggtc ggctgcttcg gcctgaccga gcccgaccac
     7081 ggctccgatc ccggcagcat gagcacgcgc gccgtgtcgg tggccggcgg ctacaagctc
     7141 tcgggctcca agatgtggat caccaactcg ccgatcgccg acgtgctggt gatctgggcc
     7201 aagctcgacg gcggcgccat ccgcggcttt gtcctggagc gggcgtggaa gggcatcgcc
     7261 acgccaaaga tcgagggcaa gttcagcctg cgcgcctcgg tcaccggcgc catcatgctc
     7321 gacgaggtct tcgtgccggc cgagaacctg ctgcccaacg ccgccggcct gggcgggccg
     7381 ttcggctgcc tcaacaacgc gcgctacggc atcgcctggg gcgccttggg cgcggccgaa
     7441 ttctgctgga agcaggcgcg caactacacg ctcgaccgca agcagttcgg ccggccgctt
     7501 gccgccaacc agctcatcca gaagaagctc gccgacatgc agaccgagat cgcggtcggc
     7561 ctgcaagcct gcctgcgcgt cggccggttg aaggaccagg gccacgccca gccggagatg
     7621 atctcgctga tcaagcgcaa cagctgcggc aaggcgctcg acatcgcccg cgtcgcccgc
     7681 gacatgcacg gcggcaacgg cgtgtcggac gaatatcatg tgatccgcca cgtcatgaac
     7741 ctcgaagcgg tcaacaccta cgagggcacg cacgacgtgc acgccctgat cctcggccgc
     7801 gccatgaccg gcatccaggc cttcaccgcc ggaggataag gagcgctcct gccgccggcc
     7861 ggcgacatcg cgatggtcgt cgccggcgcg ctggcggccg gattcgtcca tggtctcagc
     7921 ggcaccggct atgcgctggt ggccctgggc ttctggctgc aggccatgtc gccggtcacg
     7981 gcggctcctc tggtggcgct gtgcagcgtc tgcgcgcacg tgcaggccct gcccgcgatc
     8041 tggcgcggtg tgcgctggtc ccgcctctgg ccctttctcg ctgcaggcct tttgggcgtg
     8101 ccgttgggca cgatgctgct ggagcatgtc cgcgtgcagc cgctgaagct cggcgtcggc
     8161 ctgctgctga tcttctacag cgcctggatg gggctcgtgc gccggccgcc gatcgtgacc
     8221 ggcggcggcc gccctgccga cgctgtggtg ggcttcatcg gcggcgtgat gggcggcatg
     8281 gcgagcctca gcgggccggc gccgaccatc tggctgcagt tgcgcggctg gaccaaaggc
     8341 gagcagcgcg gcgtcaacca gcccttcaac atggccgtgc tcgcgaccgc tctcctgtcc
     8401 gccgccgtcg caggcctgct cgaccgcacc tttctggtct gggcggcgat cgcgctgccg
     8461 gcgtccctga tcggcgcgtg gatcgggctg gtggtctacg gccgcatcga cgataccggc
     8521 tttcgccgca tcgtgcttat actgttgatc ctctcgggag cggccctgat cgtgtcggcg
     8581 ttgcgatgaa gctcaatacc tttgccgtga cgttcgttgc cggctgcgcc gcgattgcca
     8641 tcgcggtgtt ggccctccac aagcccgagg cgacgccgcc gaccggcaat gcgccgacag
     8701 cgccgcccgc cacttggccc gactacagcg tgaatgggcc gggctttatc acgcccgctg
     8761 tcgccgacgg cgagctgatc gcctacggct accggctggt gtcgcagacc ttcgccacca
     8821 tcggcccgga ggtcggcgat ccggcgatgc gcttcgccgg caacaacctc gcctgccaga
     8881 actgccatct cgacggcggc accagccgca acggcctgcc gctggtcggc ctgttcaaga
     8941 cgttcccgaa gttttcgccg cgcgatcagc gcgtggtcac gctgcccgag cggctggacg
     9001 aatgcatgac gcgctcgatg aacggccgca agctgcccga cgagtcgcgc gagatgtcgg
     9061 cgttgctggc ctatatgcgc ttcatcggcg agccgccacc ggtcgagagc gagcccgccc
     9121 cagccgcgcc gctgccggcc gacgcgggcc gcggcgccga ggtcttcgcc acggtgtgcg
     9181 cggtctgcca tcaggccaac ggccttggcc agcgcatggg ttcgccgggc aacgcgcgcg
     9241 gctacctctt cccgccgctg tggggtcccg acagcttcaa tgacggcgcc ggcatggacc
     9301 agtatcgcaa catcgtgggc ttcgtccgtc gcaacatgcc gcgcggcgtc gatccacagc
     9361 atccccagct cagcctgcag caggcctggg acgtcgctag ctacgtgcag agcatgccgc
     9421 gtccgcacga caatcaacgc tgatgtcgtc ctgagcgaag cgaaggacct catcgccgct
     9481 tgcaaccggc atgagatcct tcgctgcgct tcagcgcggg ggttaccccg cgcgcgatga
     9541 caaataggga aggcagccgc tttcgtcgag gatcgcttta agtcccggcg aacccttcgc
     9601 cgccgcatac ttgcggcgga tctcggccag tgaccgcgca tggtacttct gcggctcctg
     9661 cgaccatggc gcgccgccca acgtcatctc gaagctcttg tcgccgcgcg agagggcggc
     9721 cgcgttggcc gccgaccacg gcaggaacaa gcctccgact tcctgcgtca gcagcggcat
     9781 caagctgggc gccagcgccg tccacggttc gaacgggcct tcggccttgg gcgagagcat
     9841 gcgctgcacc caggccatga ccttgggcga agaggtgcgc atgagagcgc ccggcgtggg
     9901 atcggtggcg gcttcgtaga gctggcccca caggccgaaa tcggccatcg ccgggcggcc
     9961 gcccagcatg tagggccgcg cctgcaagtg cgcctcgagc aagccgagca cacgcttgaa
    10021 cgaggcctcg atcgtgggct gcgtccggtc gttcgaaccg acgaagccca gccggccggt
    10081 catgcgctcg gccacggcgg cgcgtgcctg ggccacggcc agcgggcctt gcgcgcccat
    10141 catctgctgg gcgatgcgct cggcggtcga ccaggcgtcc ggcgggtagc gccagcgata
    10201 gtggaacatc catttgttgc cccactcgtc gccatactcc tcgagcagcg ccgagacgaa
    10261 ggcgagcgcg ggatcttggg gcacgatcga aggctcggcc tggctcgcct cgaagcgttc
    10321 gatgatcggc gtcgagtcct gcacaccctc accttctggc gtcaccacca gcggcaccag
    10381 cggcagcttg gcgtatttct ggaactcggc ctgcaccgcg ggcgagcgcg ggatccactc
    10441 gtgggcgaag ttcttgtagc ggaagtagga gcgcactttc accgaatacg gcgacagttc
    10501 cgagccgaag atccggtaag tgctcacggc gccgtcagat ccagcgcttg cgcttcaacc
    10561 agatgaacag gccgccgaca atgacgacga cgatgatcca gaagaaggcg taaccgtatt
    10621 tccagccgag ctcgggcatg ttgccgaccc cgcgctcgaa attcatgcca tagatgccgg
    10681 ccaggaagct gagcggcatg aagaagacgg tgatgatggc catcgtcttc atgacctcgg
    10741 ccatgcggtt ggacgcatgc atgaggtaga cttccatcaa gccgttggtc atttcgcggt
    10801 agctctcgac caggtcgagc acggccacgg catggtcgaa gcagtcgcgc aggtaggtgc
    10861 gcgtctcggg catgatgacc ggcacttccg gccgcattac cgccagcacg gtctcgcgct
    10921 cggcccattc gatcctgtgg aaggccacca gcgcccgccg cgcctggtgg atgtggttca
    10981 gcgtgtcgtg ggtgggatga ccgagcgcct cgtcctcgag ctcctcgagg tggctcgaca
    11041 gcgcctcgat cagcgggaac ttgcggtcga ccacgagatc gatcagcgca tagacgaggt
    11101 agtcgatgcc gaaggtgcgc agccgcgacc ccgccgtctg caggcggtca cgcaccggct
    11161 tgaagatgtc cagcttgtga tcgtggaagg agatcacgta gttctcgccg aagaagatgt
    11221 tgacctggcg cgacagcagc tcgccgccgt cgtagaccgg gtcgttcagc acgatgaagc
    11281 cctggccttc gtagaggtcg agcttgctcc tctgatgacc gtggaagacg tcctcgagcg
    11341 ccagcggatg caggttgaag gccatgccga ggtcgcgcag catatcggag ctgggccgcc
    11401 cggcgacgtc gatccaggtg tggccgggcg tgccgagatg gaagcggcat tcgtcgacct
    11461 ccacgccgtg cagcacctgc acgtcctccg acgtgtactc gaccagggtg aagtcgagcg
    11521 cctcgtcggg caccggcgcg cgcccggcga gcgtgccggg cgcggtgccg ggcttggtat
    11581 ggcggtgaac gagggcgtcc atggtgccaa agcgccgttg ccggcgtcag acctcctgca
    11641 tgatctggac gtcgggtcgc ccggcgagat agtcgccgag cttgcggccg atctccttgt
    11701 agtgcggcgc agcgcgatgg gcgtcgagtg ccgcctggtc gtcgtagcgc tccagcatga
    11761 cgtagacgtt gacgtcggcc gtcttgtgca acgcatagag cttgttgccc ggctcgtcgg
    11821 cccggacctt gccctgcaag gccttcatcg tcgcttcgaa gtcggcattg gtgccgggct
    11881 tgatggtgag cttggcgatg acaccgatca tggtcgcatc ctctttcccg gctactgcgg
    11941 ccgctttttc acaaggtact tgtgttcgcc gtcgcatacc agttcgccct tctggttatg
    12001 gatggtgagc ttcaggacga cgacgccggt ggcgcggcct gccttgagct cgctcacctc
    12061 gagcaggggg tagagcgtgt cgccgcaata gaccggcttc aggaaccgcg aggactgctc
    12121 gaggaagccg accagcgaat cgccgatgac atgcgggaag atgccggcgc cggcggcacc
    12181 ctggatcgcc acttgcaggc cgtgcgccag caggtcgcga tggccgcgcg ccttgcagta
    12241 ttcgcggtcg tagtgaatcg gatggttgtc gccgctcgcc gtttggaagg cggcgaacag
    12301 cgcttcggtc tgggtgcgcg agttgatgta aaacgtctgc ccgaccttca agtcctcgaa
    12361 ccagtgggtc ggtccgaagc ggtgctcctc gggcttgaat tgacccaccg tcacgcgcgc
    12421 tctcccttgt gcgccggcac catagcccgc ggcctatgca agaggaaaca gatcgccgag
    12481 cttgtcgagc gtcgcctcga gataatcggg cctgctgtcg tcgcggggcg gaaggccgat
    12541 gcggttgtgc cagtagaccg gcatgcccac gcccttcgca cccggcacgt cggacgccga
    12601 gccggcgacg aacagcgtcc gttcaggtgc cgtccccaac gccgccagca cggcgcgata
    12661 gggttcggga cgtggcttgt agaagcccac gctctcggcc gtgaccacga ccttgaacgg
    12721 cacgccgacg cgatcggccg cccgcccgcc gagccggatc gagcagttgg tcgcgaccgc
    12781 catcggaacc gacaggcgct tcagcacctc gcgggcttcg ggccagggct tcaactcgtc
    12841 ccagcgcttg tccagatcgt cgcccaggct ttggggcagg ccgacatcgc gcgctgcgtc
    12901 gcgcaccagc gtttcatacg gcctgtaggc gccacttccg taggtgattt cgagatagcg
    12961 gcggcgccac gccaggccgg cgtcaggcga gcccgcgacg tcgttccaca gggtccagga
    13021 atcgatcagc gccgtcagca ggtcgaagac gacggcgtcg tatttcacgc cgcctttgcc
    13081 ttgcggccca tgccgtcgaa cagatcgagc atgcgttcgc gccaggcgtg gacgggatcg
    13141 tccggctcca gcagctcgaa cgggctggca acgcgcgccc acaggaaagc gccggccagc
    13201 gcatagtcgg gataggccgg gtgctcgccg gccaggaact tctgctcgcg cacgatgcgg
    13261 cgcgccggct cgagcaccga gcggaaggcc gccacgccct tgtcgcgcgc cttggcctgg
    13321 aagccggcga aatcggtggt gccgagccgc ttgccgcgcg attcccggaa gtagggctgg
    13381 tcggccggcc gcacgcgatc atagaggtcg ccgacgacga tgggaaacag cgccgcctgc
    13441 acggccgtat cgacccagcc ggcgacgaag cgcgcgtagg acacggccat ctcgctcttg
    13501 aacagcggct tgtcggcata ggcctggtcg agataggtcg cgatcgccca gctatccttc
    13561 accaccttgg tgccgtcgtg gatgaccgga acggtctgcg actgggcgaa ggcgatcttg
    13621 tgcttctcgg tgaagccggt cggctcgtct ctccagtcga gacctttgtg cttgagagcg
    13681 aacttggcac gccagcagaa cgggctgggg cggcggtctt cctgaaaaac caggtcgtag
    13741 agcgtgatca tgccggcctc actttccgtc cagcatgcgg atgatgccgg aaaaatcctt
    13801 ggcgccgttg ccgctgttga cgaacaggtt gaaaagctgg gcagcctccg cgccgagcgg
    13861 cgtgctggcg ccggcggcgt tggccgcctg ctgggcgagc atcaggtcct tcagcatcat
    13921 cgccgcggtg aaacccgcct ggtagtcgcg gttggcgggc gacgtcggca cgggccccgg
    13981 cacc
//
LOCUS       DASWGA010000301         5861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1044325, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000301 DASWGA010000000
VERSION     DASWGA010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5861
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044325"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..141
                     /locus_tag="VF991_07345"
     CDS             <1..141
                     /locus_tag="VF991_07345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX9556292.1"
                     /translation="KLIGRILLPERCANLCFGGRKRNRLFMTASQSVYALYVEAQGVA
                     GG"
     gene            244..678
                     /locus_tag="VF991_07350"
     CDS             244..678
                     /locus_tag="VF991_07350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556293.1"
                     /translation="MKSGLLILAVVAIVTAVAGDVVMGPSRPFPRIETKAQLALPPST
                     TSDPAGRADAVETRHQPVPVLWTNRTSIAAEPVDPEAALANDTAPGKVAESAAKAAIE
                     ADGYRAVRILQRATGGEWRARALRGATEVGLSVDGSGNVSVD"
     gene            complement(682..2196)
                     /gene="zwf"
                     /locus_tag="VF991_07355"
     CDS             complement(682..2196)
                     /gene="zwf"
                     /locus_tag="VF991_07355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEX9556294.1"
                     /translation="MVIFGAGGDLTKRLVVPALYNLAHTDVLPENFALIGVGHGESTS
                     AKWCDQLHAMLKTFVGNATSEFDADKIDQAAWTRLAARMRYIQGDFTKPDVYGRIGEA
                     LGEAEKAHGTRGNVIFYLAVADRFFGTVVDQLGQAKLTEQGPADAGKPSFWRRVVVEK
                     PFGHSLPSARELNARILRTLHEDQIFRIDHFLGKDTVQSIMAFRFANGLFEPIWNRDR
                     IDHVQITVTETVGVETRGAFYEATGALRDMVPNHVFALLTMVAMEPPTCFDAEAIRAK
                     KADVLDAMPALKPAQAVRGQYGPGVVLGKPVKAYRDEPKVAPDSNVETYVAMELAIDN
                     WRWAGVPFYVRTGKHLAQRLTEIAIRFKQAPYAAFEDTPVNTLRPNWLVLRIAPDEGI
                     SLQFEVKRRGPVMDLAAVKMDFRYDDWFAREQNVGYETLLYDVMVGDQTLFMRADLVE
                     QAWRIVQPVLDDWAAAKADFPNYDSGSTGPAAADALLNGDRAWRPVALPPKPKA"
     gene            complement(2347..3060)
                     /locus_tag="VF991_07360"
     CDS             complement(2347..3060)
                     /locus_tag="VF991_07360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX9556295.1"
                     /translation="MPATGTAKSKNGLKASKRRQGNPAPSQAFDVDTFLATVGTGRTI
                     ATYKPKSYIFRQGSDCAGVFYIRKGRVELSVVSKQGKERVVGILGPGTFVGEGCLAGQ
                     PLYLASARASTEATLVRVETATMIQAVRDHPELSQRFMAFLLLRNSQIEADLVDQLFN
                     SSEKRLARLLILLAQIGQQAELRTVTMPISQELMAARIGTTRSRINYFMNKFRKLGLI
                     EYNGELKVHSSLLNLIVQD"
     gene            complement(3314..3766)
                     /locus_tag="VF991_07365"
     CDS             complement(3314..3766)
                     /locus_tag="VF991_07365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556296.1"
                     /translation="MKHNLFALGLISILTGLSSPRASLAQDPSAAAIKSRIEAWGYGE
                     VKDLSRDRTGGWHARVVRNNVEIAVSVDKGGRIIAQPADGQLAARCNQLYRIASRTVS
                     GGAGAEGSSASNMGVIGAGLDCQKGRYDEGIKALEKILNGQRVPYPPG"
     gene            complement(3835..4266)
                     /locus_tag="VF991_07370"
     CDS             complement(3835..4266)
                     /locus_tag="VF991_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556297.1"
                     /translation="MVGRYSLAMFDTDFAHDPTLESELRCLSDWQRRHLPNIHSPLGR
                     QMLAWLIRNRDQPMPFSHLLVSTSSSPTSVRHLLNQFAVLGLVEVRKAPVTCRRGDIV
                     ATPKLKERLEEYAERIAGIILRHRGIGLAHLKQSGLSKTCF"
     gene            4352..4822
                     /locus_tag="VF991_07375"
     CDS             4352..4822
                     /locus_tag="VF991_07375"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX9556298.1"
                     /translation="MSQKAKRIGWATWPILVLVLAGSVISSGASRAESIIPTLHATMR
                     TMRASLAQIGEFAKGNGEPAAALDAATKIVTLAKSIPSIFPPGSELTELPGKSGAPPT
                     TWNDVDRFLDAQKHLVIETSKLLAAVNGGNQEAIGQQLATTRKACSACHEQFRD"
     gene            4839..>5861
                     /locus_tag="VF991_07380"
     CDS             4839..>5861
                     /locus_tag="VF991_07380"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556299.1"
                     /translation="MSWRILTTMIGFGMLWSPAFAADPVPTMQETPALLEQVKAGALP
                     PVGQRIPQQPRILRRFAGGDGPGRPGGQLNMLVAGARDTLLMTVYGYTRLIVYDDRFE
                     LHPDILESYDVKDGRVFTLTLRAGHKWSDGQPFTTEDFRFFWEDVANNRELSPSGPPV
                     ELLVDGQPPKVDIIDQRTIRYTWDKPNPYFIASQARAAPLFLFRPAHYLKKFHLGYTP
                     EKEILKSARGGEQGGRWIETYRRLDAMYANDNVDLPTLNPWVNTTPSPAQRFVFVRNP
                     YYHRIDQNGRQLPYIDRVTLTVAAATLIPTRAGLGEADLQVRYLNMRDYTFLQKSSKA
                     AGLAVHL"
BASE COUNT          985 a         1916 c         1923 g         1037 t
ORIGIN      
        1 aagctcatcg gccgcatcct gctgcccgag cgctgcgcca acctctgctt cggcgggcgc
       61 aagcgcaacc gcctgttcat gaccgccagc cagtcggtct acgcgctcta tgtcgaggcc
      121 cagggcgtgg ccggcggctg acgtcgggaa tgaaggaggt ccggcgtcag gggaacgtct
      181 ggcaccgcgg tgcgttatcg ttgcagccgc ctccagggtc ggcggaacag gcagcgccag
      241 ctgatgaaga gcggtttgtt gatcctcgca gtcgtggcca tcgtgaccgc tgtggccggc
      301 gatgtggtga tggggccatc gcggcctttt ccgcgaatcg agaccaaggc gcagctggcc
      361 ctgccgcctt ccacgacttc agatcccgcc gggcgcgccg atgcggtgga gacccgccac
      421 caacccgttc cggtcctctg gaccaaccga acgtcgatcg ctgctgaacc ggtcgatccc
      481 gaggctgcct tggcgaacga tacagctcca ggcaaagtgg cggagtccgc cgccaaggcg
      541 gcgatcgagg ccgatggcta cagagcggtt cgcatcctgc aaagggccac gggcggcgaa
      601 tggcgcgcgc gcgcgctgcg cggagcgacc gaggtgggtt tgagcgtcga tgggagcggc
      661 aacgtttcag tcgactgacg ctcaggcctt cggcttcggc ggcaaggcaa ccggccgcca
      721 ggcgcgatcg ccattcaaca gcgcatcggc agccgccgga ccggtgctgc cggaatcgta
      781 gttggggaaa tccgctttgg cggccgccca gtcgtcgagc acgggctgca cgatgcgcca
      841 ggcctgctcg accaggtcgg cgcgcatgaa cagggtctga tcgccgacca tgacgtcgta
      901 cagcagcgtc tcgtagccga cgttctgttc cctggcgaac cagtcgtcgt agcggaaatc
      961 catcttgacg gcggcgaggt ccatcaccgg cccgcgccgc ttgacctcga actggagcga
     1021 gatcccctcg tcgggggcga tgcgcagcac cagccaattg ggccgcagcg tattcaccgg
     1081 cgtgtcctcg aaggcggcat agggcgcctg cttgaagcgg atggcgatct cggtcaggcg
     1141 ctgcgccagg tgcttgccgg tgcgcacgta gaacggcacg ccggcccacc gccagttgtc
     1201 gatcgcgagc tccatggcga cgtaggtctc gacgttcgaa tcgggcgcca ccttcggctc
     1261 gtcgcgatag gccttgaccg gcttgcccag cacgacgccg gggccgtatt ggccgcgcac
     1321 cgcctgggcc ggcttgagcg cgggcatggc gtccaatacg tcggccttct tcgcacggat
     1381 ggcttcggcg tcgaagcagg tcggcggctc catggccacc atcgtcagca gggcgaacac
     1441 atggttgggc accatgtcgc gcaacgcccc ggtcgcctcg tagaacgcgc cgcgggtttc
     1501 cacgcccacc gtttcggtca cggtgatctg cacgtgatcg atgcggtcgc ggttccagat
     1561 cggctcgaac aggccgttgg cgaagcggaa cgccatgatg ctctggaccg tgtccttgcc
     1621 gaggaaatgg tcgatgcgga agatctggtc ctcgtgcagg gtgcgcagga tccgggcatt
     1681 gagctcgcgc gccgacggca ggctgtggcc gaacggcttc tcgacgacga cgcggcgcca
     1741 gaacgacggc ttgccggcgt cggcgggtcc ctgctcggtc agcttcgcct ggccgagctg
     1801 gtcgacgacg gtgccgaaga agcggtcggc gacggcaagg tagaagatga cattgccacg
     1861 cgtgccgtgg gccttctcgg cctcgcccag cgcctcgccg atcctgccgt acacgtcggg
     1921 cttggtgaag tcgccctgga tatacctcat cctcgccgcg agccgcgtcc aggcggcttg
     1981 gtcgatcttg tcggcatcga attccgacgt ggcgttgccg acgaaggtct tcagcatggc
     2041 gtggagctgg tcgcaccatt tcgcgctggt gctctcgccg tggccgacgc cgatcagcgc
     2101 gaaattctcc ggcagcacgt cggtgtgtgc gaggttgtag agcgccggca ccaccaggcg
     2161 cttggtgagg tcgccgccgg cgccgaagat caccatggcg cagggatcgg cgggcttcgg
     2221 ccggcggcgc ggcggcgctt cgaccctctg cgcggaggac ggaacgcgaa tcggctgagt
     2281 gtcgggcatc ggccatcctc cgttgttgaa gcgcctcggc cgcggcgagg gccgctcggc
     2341 ccggcctcag tcctgcacga tcagattgag cagcgaggaa tgcactttta gctcgccgtt
     2401 gtattcgatg agtccgagct tgcggaactt gttcatgaag tagttgatgc gcgaacgggt
     2461 cgtgccgatg cgtgccgcca tgagctcctg gctgatcggc atggtgaccg tgcgcaattc
     2521 cgcttgctgc ccgatctgcg ccagcaggat gagcaggcgt gccaggcgct tctcgctcga
     2581 attgaacagc tgatcgacca ggtccgcctc gatctggctg ttgcgcagca ggagaaacgc
     2641 catgaagcgc tgggaaagct cgggatggtc gcgaaccgcc tggatcatgg tcgccgtctc
     2701 cacgcgcacc agcgtggctt cggtggaggc gcgggccgat gcgagataga gcggctggcc
     2761 ggccaggcat ccctcgccga cgaatgtgcc cggaccgaga atgccgacga ccctttcctt
     2821 gccctgcttg gagaccacgc tgagctcgac ccggcctttg cggatataga agaccccggc
     2881 gcaatcgctg ccctgacgga agatgtagct tttcggcttg taggtggcga tcgtgcggcc
     2941 ggttccgacc gttgccagga acgtgtcgac gtcgaaggct tgcgatggcg ccgggttgcc
     3001 ctgccttctc ttggatgctt tcaggccgtt ttttgatttc gccgtgccgg ttgctggcat
     3061 gctttcacct gcgcgttctt gtctgcggcc acgatgccga gctgttcagg tcgggacagc
     3121 cggcgaccat tttattccct atcgtccggc catcaatatc gccggcgaca gatatctccg
     3181 gccgcggctc cgtgcaatcg ggcgagccag ccaccctcca cggcttccat cacgtgccgc
     3241 gctcaggctg acgctgtggg acgaggcggc cggcaagctg gtggcctttc gggacgtggc
     3301 ctgaacgatc gtctcaaccc ggcgggtacg gtacgcgttg gccgttcagg attttctcca
     3361 gcgccttgat gccctcgtcg tagcggcctt tctggcaatc gagaccggcg ccgatcacgc
     3421 ccatgttgga tgctgaggag ccttccgcgc cggcgcctcc cgacacggtg cggctggcga
     3481 tcctgtacag ttggttgcag cgcgccgcca gttgtccgtc ggcgggctgg gcgatgatcc
     3541 ggccgccctt gtcgaccgac acggcaatct cgacgttgtt cctgacgaca cgggcgtgcc
     3601 agccgccggt gcggtcgcgc gacaggtcct tgacctcgcc atagccccag gcctcgatcc
     3661 tggatttgat cgccgctgcc gatggatcct gggccaggct tgcccgcggg ctgctcaggc
     3721 cggtcaggat ggaaatcagg ccgagcgcaa agaggttgtg cttcatcgga cacctccttc
     3781 tggagacgat accgatgaag ggcgatggaa attccggttc ttctgctcac ctggtcagaa
     3841 gcatgttttg gagagccctg actgtttgag atgagccaag ccgataccgc ggtgacgcaa
     3901 aatgatgccc gctatgcgct cggcgtactc ttcgagcctt tctttcagct ttggagtggc
     3961 gacgatatct ccccgacgac aagtgacagg ggcttttcga acctcgacca atccaagaac
     4021 ggcaaactgg ttgagcaggt gcctcacgga cgtcgggctg gaactcgttg aaaccagcaa
     4081 atgactgaac ggcatcggct gatcccgatt tctgatgagc caggcgagca tctgccgacc
     4141 gagcggagaa tggatattgg gcagatgtcg ccgctgccag tcggagagac atcggagctc
     4201 gctttcgagc gtcgggtcgt gtgcaaagtc ggtatcgaac atagccaggg aataccggcc
     4261 gaccatcgat cttattccag tccggaacgc gcggaataac gcctggcatc cggcggtagt
     4321 cgccttcagt ggttgcattg cgagtagcgt catgtctcag aaggccaagc ggatcggttg
     4381 ggcgacctgg ccgatcctcg ttctggttct tgccgggagc gtgatcagct ccggcgccag
     4441 ccgcgccgag agcatcatac cgaccctgca cgccaccatg cggacgatgc gcgcgtcgtt
     4501 ggcccagatc ggggagttcg ccaaaggaaa tggcgagccg gcggcggcgc tcgacgcggc
     4561 gacgaaaatc gtcacgcttg ccaagtcgat tccgtcgatc ttcccgccgg gcagcgagtt
     4621 gaccgagctg ccgggcaaaa gcggcgcgcc gcccaccacc tggaacgacg tcgaccgctt
     4681 tctcgacgcc cagaagcatc tcgtcatcga aaccagcaag ctgctggccg cggtcaacgg
     4741 cggcaaccag gaagcgatcg gccaacagct ggcgacgacg cgcaaggcct gctcggcctg
     4801 ccacgagcaa tttcgcgact gaccgccccg aggttcgcat gagctggcgc attctcacga
     4861 cgatgatcgg gttcggcatg ctgtggagcc cggcgttcgc cgccgacccg gtgccgacga
     4921 tgcaggaaac cccggcgctg ctcgagcagg tgaaagcggg cgcgttgccg cccgtcggcc
     4981 agcgcattcc ccagcagccc cggatcctca ggcgcttcgc cggcggcgac ggcccgggcc
     5041 ggcccggcgg acagctcaac atgctggtgg ccggtgcgcg cgacacgctc ctgatgacgg
     5101 tctacggcta cacccggctg atcgtgtacg acgacaggtt cgagctgcac cccgacatcc
     5161 tggaaagcta tgacgtcaag gacggccgcg tgttcaccct gacgctgcgc gccggccaca
     5221 aatggtcgga cggccagccc ttcaccaccg aggattttcg cttcttctgg gaagacgtcg
     5281 ccaacaacag ggagctctcg ccgtcgggcc cgccggtcga gcttttagtc gacggccagc
     5341 cgcccaaggt cgacatcatc gaccaacgga ccatccgcta cacctgggac aagcccaatc
     5401 cctacttcat cgcgagccag gcgcgcgccg ccccgctctt cctgttccgg ccggcgcact
     5461 acctgaagaa gttccacctc ggctacacgc ccgagaagga gatcctgaag tcggccaggg
     5521 gcggcgagca gggtggccgc tggatcgaaa cctaccgccg ccttgacgcg atgtatgcca
     5581 acgacaacgt cgacctgccg acactcaacc cgtgggtcaa caccacgccg tcgccggccc
     5641 agcgcttcgt cttcgtgcgc aacccgtact atcaccgcat cgaccagaac ggccggcaac
     5701 tgccctacat cgaccgcgtg acgctcaccg tggcggcggc cactctcatc cctaccaggg
     5761 cgggcctcgg cgaggccgac cttcaagtgc gctacctcaa catgcgcgac tacacgttcc
     5821 tgcagaagag cagcaaggcg gcggggctcg ccgtgcacct g
//
LOCUS       DASWGA010000302         2065 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1297565, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000302 DASWGA010000000
VERSION     DASWGA010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297565"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..1285)
                     /locus_tag="VF991_07385"
     CDS             complement(119..1285)
                     /locus_tag="VF991_07385"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9556300.1"
                     /translation="MDFAFSEDQLAIKDNVAKLCAQFDDKYWLKKDKEGGFPEDFYQA
                     MADAGWLGIAMPEAYGGAGLGITEAALLMQTVAESGAALQGASAIHLNIFGPNPIVVF
                     GTEEQKQRILPDVIKGKVKGCFAVTEPDAGLNTTALDTRAEREGNGYIVRGKKTFTST
                     AQVADKMLLIARTTPKDKCRRATDGLSLFYTDFDRSKIEVREIEKMGRKAVDTNQIFI
                     DGLKVPLEDRIGEEGKGFHYLLHGLNPERVLIAAEAIGIGKAALARATQYAKERIVFG
                     RPIGKNQAIQHPLAESWMQLEAANLLTFKAAWLYDNGRECGAEANSAKYLGARTAYDA
                     CERAILTHGGYGYAKEFHVERFLREVMIARIAPVSEQLILCYVAERVLGLPKSY"
     gene            complement(1295..>2065)
                     /locus_tag="VF991_07390"
     CDS             complement(1295..>2065)
                     /locus_tag="VF991_07390"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9556301.1"
                     /translation="IYFDLAGPQAAPTVCFTHSLNADGGMWVEQLVPLLAAGYRVLRL
                     DMRGHGGSAPVDGYYTMDALAADVKGALDVLDIRKVHYVGLSIGGMIGQGFALAYPDR
                     LSSLTLCDTQPSTPPGSTAAWDERKDIVRKSGGLKALADGTMERWFTDEFKKVNPVRW
                     REIRDTISGTTPAGLLGCASAIQNFDYEGKLATIKLPSLVICGDEDPGTPPDRNKLIA
                     SKIPGGRYEGIAKARHLPNVERPDQFNRIMLAWLAANR"
BASE COUNT          316 a          673 c          691 g          385 t
ORIGIN      
        1 ggacgaagcg gccggacggt tctttgcgct cgcctttgcg ctggaggaga tgcggcgcac
       61 cttccgcgac ctcggccgcg acgtcgcggt gacggcgctg gcgccggaga gcgattgatc
      121 aataactctt gggcaggccc aacacgcgct cggcgacgta gcacaggatg agctgctcgc
      181 tgaccggcgc gatgcgcgcg atcatgacct cgcgcaggaa gcgctcgacg tggaattcct
      241 tggcatagcc gtagccgcca tgggtcagga tcgcgcgctc gcaggcgtcg taggcggtgc
      301 gcgcgccgag atatttggcc gagttggcct cggcgccgca ttcgcgaccg ttgtcataga
      361 gccaggcggc cttgaaggtc agcaggttgg cggcctcgag ctgcatccag ctctcggcca
      421 gcggatgctg gatcgcctgg ttcttgccga tcggccggcc gaacacgatg cgctccttgg
      481 cgtattgcgt ggcccgcgcc agcgccgcct tgccgatgcc gatcgcctcg gccgcgatca
      541 ggacgcgctc gggattgaga ccgtgcagca ggtaatggaa gcccttgccc tcttcgccga
      601 tcctgtcctc gagcggcact ttcagcccgt cgatgaagat ctggttggtg tcgaccgctt
      661 tgcggcccat tttctcgatc tcgcgcacct cgatcttgga gcggtcgaaa tcggtgtaga
      721 acagcgacag cccgtcggtg gcgcgccggc acttgtcctt gggcgtggtg cgcgcgatca
      781 gcagcatctt gtcggcgacc tgcgccgtcg aggtgaaggt cttcttgccg cgcacgatgt
      841 agccgttgcc ctcgcgctcg gcccgcgtgt ccagcgcggt ggtgttcagc ccggcgtcgg
      901 gctcggtgac ggcaaaacag cccttcacct tgcccttgat gacgtcgggc aggatgcgct
      961 gcttctgttc ctcggtgccg aacacgacaa tcgggttggg cccgaagatg ttgagatgga
     1021 tcgccgacgc accctgcagg gccgcgcccg attcggccac ggtctgcatc aacagcgccg
     1081 cttcggtgat gccgaggccc gcaccgccat aggcttccgg catggcgatg cccagccagc
     1141 cggcatcggc catcgcctgg tagaagtcct cgggaaaacc gccttccttg tccttcttca
     1201 gccagtactt gtcgtcgaac tgcgcgcaga gcttggcgac gttgtccttg atcgccagtt
     1261 ggtcctcgga gaaggcgaaa tccatgtctc ggtcctagcg gttggcggcg agccaagcca
     1321 gcatgatgcg attgaactgg tcgggccgtt cgacgttggg caggtggcgc gccttggcga
     1381 tgccctcgta gcggccgccg gggatcttcg acgcgatcag cttgttgcgg tcgggcggcg
     1441 tgccgggatc ctcgtcgccg cagatcacca ggctcggcag cttgatggtg gcaagcttgc
     1501 cctcgtagtc gaagttctgg atcgccgacg cgcagcctaa aaggcccgcc ggcgtggtgc
     1561 cactgatcgt gtcgcggatc tcgcgccagc gcaccggatt cactttcttg aactcgtcgg
     1621 tgaaccagcg ctccatggtg ccgtcggcca acgccttcag gccacccgac ttgcgcacga
     1681 tgtccttgcg ttcgtcccac gccgcagtcg agccgggcgg cgtcgacggc tgggtgtcgc
     1741 acaacgtcag cgacgacagg cggtcgggat aggccagcgc gaagccctgg ccgatcatgc
     1801 cgccgatgct gaggccgacg tagtgcacct tcctgatgtc gagcacgtcg agcgcgcctt
     1861 tcacgtcggc cgccagcgcg tccatggtgt aatagccgtc gaccggggcg ctaccgccat
     1921 ggccgcgcat gtcgagccgc agcacacgat agccggcggc cagcagcggt acgagctgct
     1981 ccacccacat gccgccgtcg gcattcagcg aatgggtgaa acagaccgtc ggcgcggcct
     2041 gcgggccggc aaggtcgaaa tagat
//
LOCUS       DASWGA010000303         4096 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1297580, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000303 DASWGA010000000
VERSION     DASWGA010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4096
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297580"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="VF991_07395"
     CDS             <1..263
                     /locus_tag="VF991_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007561843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEX9556302.1"
                     /translation="LGGDARAAIEPVRSQIGSGALPVDLLPSFALAVYDEGLDRLADA
                     FRRLPIPVIGRISAGALFFDLRTLNDEATFVAQLDRLDVVAG"
     gene            247..957
                     /locus_tag="VF991_07400"
     CDS             247..957
                     /locus_tag="VF991_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006472067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9556303.1"
                     /translation="MSWLARTFGAERRLAQALAAWNAGDHGVALDLWAPLAHRGHARA
                     QSNMGAAFLEGRGVERDLSKAVDWLRRAAEQGDAGGQRNLALCYYEGWGVPQDQAEAA
                     RWYEKAAEQDDPDAQDMLSWMKLLGGGCPQDYAAARRWAEKAAAQGRVGSMARLGDIY
                     HNALGVERDPVLAAHWWQRAAALGHPEAQAMLGAAYLAGKGVARDRMQALHWLEQAEA
                     GGAGELAAGFLRQARAET"
     gene            954..2867
                     /gene="selB"
                     /locus_tag="VF991_07405"
     CDS             954..2867
                     /gene="selB"
                     /locus_tag="VF991_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HEX9556304.1"
                     /translation="MIVGTAGHIDHGKTALVKALTGVDADRLKEEKARGITIDLGYAY
                     SDLGDGRQLGFVDVPGHERFVHNMLAGATGIDAALLVVSAAEGVKPQTVEHLQIVDLL
                     GLDRGIVALTKADLADDDQILERMAEVETLLSTTSLKGADIVPVSSLTGQGVDELKTK
                     LLSLGESGKGATGFARLAVDRCFVLAGAGVVVTGTIHAGEIRVDDRLLLTPSGLEARV
                     RGLHAQNRAAEVGRAGERCALNLTGPRLSKDAIRRGDWVVSAELHAPTDRPDVRLTLL
                     ASEGQPLKHWSPVHVHVGSAHVMGRVALLEGDRLVPGETALAQLVLEDKVGALAGDRI
                     ILRNPSATRTIGGATVIDPFGPPRNRRSQRRLAELEALGWPDGDVLAKLLRLESSFVE
                     TGRFGQARNLRPVDVDQLLEAAGGIKLEGFGFLAETLATARRDIVETLKAHHEAKPDA
                     PGLQPERLRVALAKRWPAPVFKALLDQEVRAKTVAVDGPYLRLPGHALTLGARDEALW
                     KKISAELVRERFKPPRVRDFANAYAVPEAEMRKLLQRLAKVGRVVEVAPDQYFLRPVV
                     AEMVAIAHGFGHDFTAAQFRDKLDNGRKVAILILEFFDRHGITMRRGDLRRTVPLKLE
                     QFGPLPSSGGTDR"
     gene            2900..2995
                     /locus_tag="VF991_07410"
     tRNA            2900..2995
                     /locus_tag="VF991_07410"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2934..2936,aa:Sec,seq:tca)
     gene            3350..3700
                     /locus_tag="VF991_07415"
     CDS             3350..3700
                     /locus_tag="VF991_07415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556305.1"
                     /translation="MLRLFLRLMLVVGIGMTGAACQEDGYAAPSGYYQPAPTGYSNPY
                     YNSGYYSPAPAPSRYGYSQPAPNYNQADGRRYTTVTVTNRGQNGYRDDVVQQQVVCGS
                     QYYDGYRTRTAPRC"
BASE COUNT          685 a         1335 c         1403 g          673 t
ORIGIN      
        1 cgctgggcgg cgacgcccgc gccgccatcg agccggtgcg cagccagatc ggatcgggcg
       61 ccctgccggt ggatctgctg ccgtcgttcg ccctcgcagt ctacgacgaa gggctcgacc
      121 ggctggccga cgccttccgc cgcctgccca tcccggtgat cggccgcatc agcgccggcg
      181 cgctcttctt cgatctgcgc accctcaatg acgaagcgac cttcgtcgcc caactggacc
      241 ggctcgatgt cgtggctggc taggacattc ggcgccgagc ggcggcttgc ccaggcgctc
      301 gccgcctgga atgcgggcga ccatggcgtg gcgctcgatc tttgggcgcc gctcgcgcat
      361 cgaggtcatg cgcgcgcaca aagcaatatg ggggcagcat tcctcgaagg ccgcggcgtc
      421 gaacgcgacc tgagcaaggc ggtggattgg ctgcggcgtg ccgccgagca gggcgatgcc
      481 ggtggccagc gcaatctggc gctttgctac tacgaaggct ggggcgtgcc acaggaccag
      541 gccgaggccg cgcgctggta cgagaaggcc gccgaacagg acgatcccga cgcccaggac
      601 atgctgtcat ggatgaaact tttgggcggc ggctgccccc aggactacgc ggctgctcgg
      661 cggtgggccg aaaaagccgc cgcgcagggc cgtgtcggtt cgatggcccg gctgggcgac
      721 atctatcaca acgcgctggg cgttgagcgc gatccggtcc tggcggcgca ctggtggcag
      781 cgtgccgcag cacttggcca tcccgaggcg caggcgatgc tgggcgcagc ctatctcgcc
      841 ggcaagggtg tggcgcgcga ccggatgcag gcgctgcact ggctggagca ggccgaggcg
      901 ggcggcgcgg gcgaactggc ggccggcttc ctgcgccagg cgcgggctga aacatgatcg
      961 tcggcacggc gggccatatc gatcacggca agaccgcgct cgtcaaagcg ctgaccggcg
     1021 tcgatgccga ccgcctgaag gaggaaaaag cgcgcggcat caccatcgat ctcggctacg
     1081 cctatagcga cttgggtgac ggccggcagc tcggcttcgt cgatgtgccg ggccacgagc
     1141 gcttcgtgca caacatgctg gccggcgcca ccggcatcga tgcggccctg ctggtggttt
     1201 cggcggccga aggcgtcaag ccgcagaccg tcgagcatct gcagatcgtc gacctgctgg
     1261 gtctcgaccg cggcattgtc gcgctgacca aggccgacct ggccgacgac gatcagattc
     1321 tggaacgcat ggccgaggtc gaaacgctgc tgtccacgac atcgctcaag ggggcagaca
     1381 tcgtaccggt gtcgtcgctc accgggcagg gcgtcgacga gctgaagacc aagcttttat
     1441 cgttgggtga aagcggcaaa ggcgccaccg ggtttgcccg actggcggtc gaccgctgct
     1501 tcgtgctggc gggcgccggc gttgtggtaa ccggcaccat tcatgccggc gagatcaggg
     1561 tcgacgatcg gctgctgctg accccctcgg ggctggaggc gcgcgtgcgc ggcctgcatg
     1621 cgcaaaaccg cgctgcggag gtcggccgcg ccggcgaacg ctgcgcgctc aacctcacag
     1681 gtccgcggct gtcgaaggac gcgatccggc gcggcgattg ggtggtgagc gccgagctgc
     1741 acgcgccgac cgaccggccc gacgtgcgac ttaccctgct cgcgtcggaa ggccagccgc
     1801 tcaagcactg gtccccggtc catgtccatg tcggctcggc ccacgtcatg ggccgtgtgg
     1861 cgctgctcga gggcgacagg ctggtgcccg gcgagaccgc gctggcgcag ctcgtgctcg
     1921 aggacaaggt gggcgccctg gcaggcgacc gcatcatcct gcgcaacccg tcggcgacgc
     1981 gcacgattgg cggcgccacg gtgatcgatc cgttcggtcc gccgcgcaat cgccgctcgc
     2041 agcggcgcct ggcggagctc gaagccttgg gttggccgga cggcgacgtg ctggcgaaat
     2101 tgctgcggct ggagtcgagc ttcgtcgaga ccggccgctt cgggcaagcg cgcaacctcc
     2161 gtccggtcga tgtcgatcag ctcctggagg cggccggcgg catcaagctc gagggtttcg
     2221 ggttccttgc cgagacgctg gcgacggcgc gcagggatat cgtcgaaacc ctcaaggctc
     2281 accatgaggc caagcccgat gcgcccggcc tgcagcccga gcgcctgcgc gtcgcgttgg
     2341 ccaagcgctg gccggcgccg gtgttcaagg cgctgctcga ccaggaggtg cgcgccaaga
     2401 ccgtggcggt cgacggcccc tacctgcgcc tgcccggcca cgcgctcacc ctgggcgcgc
     2461 gtgatgaagc gttgtggaag aagatctcgg ccgagctcgt gcgcgagcgc ttcaagccgc
     2521 cgcgcgtgcg cgacttcgcc aatgcctacg cggtgccgga ggccgagatg cgcaagctgc
     2581 tgcagcgatt ggccaaggtc ggacgggtcg tcgaagtcgc gcccgaccag tattttctgc
     2641 ggccggtggt ggccgagatg gtcgcgatcg cccacggctt cggccacgac ttcaccgccg
     2701 cccaattccg cgacaagctc gacaacggcc gcaaggtggc gatcctgatc ctggagtttt
     2761 tcgatcgcca cggcatcacc atgcgccgcg gcgatctgcg tcgcacggtg ccgctgaagc
     2821 tggagcagtt cgggcccctg ccgtcgagcg gcggcaccga ccggtgacat ggtgcgaatt
     2881 ctgggcgatc atcgacgacg gaggagaagc gctcccggtg gggcggctgg ccttcaaagc
     2941 cagagagggc cgttcgccgg ttcttagtgg gttcgactcc cactctcttc cgccaattct
     3001 aatccgaagc cgtccagaga aacccgatga cgccaaagtt atcggggctt ttttcgtgcg
     3061 ctgtgtcccg ccttgtccgt ggtcggccgc tagaagctac ccccaaacgg ggggtacctt
     3121 tgggggtagc tgccgcataa gctcgaaagt taccccccac atgctcaccg agaccgcaat
     3181 tcgcaaagca aaggcgcccg ccgagaaggc gctaacggcc ttctaggcct ggctgcgcca
     3241 aagcggtaga caggaaccta ttcgatcccc agaccgttgt ccgtctttaa gaggacagaa
     3301 tgatcgagta gtgggggcgt gaaaaacatc ttggcttgga ggaatagaga tgttgaggct
     3361 ctttctgaga ctgatgcttg ttgtgggcat cggcatgacc ggcgcggcgt gccaagagga
     3421 cggctatgcc gcaccgagcg gctactatca gccggcaccg acgggctaca gcaacccgta
     3481 ctacaacagc ggctactaca gtcccgcacc tgctccatca cggtatggct attcgcagcc
     3541 tgctccgaac tacaaccagg ctgacggccg tcgctatacc acggtgaccg tgacgaaccg
     3601 cggccagaac gggtatcgtg acgacgtcgt tcagcagcag gtcgtctgcg gaagccagta
     3661 ctacgacggc taccgtaccc gcaccgcacc tcggtgctga tcgcatccat gcgcgcgttc
     3721 atatgaaccg cgcattcgac gctcgcagag gcgaagagtc acaagcgcaa gccctacaag
     3781 tgctcgatct gtggcgccga ggtgccagac ttgccgatgc cggtgctttg gcatcagatg
     3841 tcgcatgtga agccgccgcc ctttaccgag aacgatgcgg tggcctgaac gtgacgtttt
     3901 cagacgcata caatagcgga cgttgatacc gaagcgccgt cggccgagcc gttcagaaga
     3961 tggcctggcc gcgcgctttc atgacgtact tcatggccct gaattcggag ttctgacgga
     4021 tcgaggcggc gacctgggcg tcgccgtcgc ggttggtcgc atcaaccagt ttctcggtct
     4081 ccggggcgca ggccag
//
LOCUS       DASWGA010000304         2908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_416281, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000304 DASWGA010000000
VERSION     DASWGA010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416281"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(319..1929)
                     /locus_tag="VF991_07420"
     CDS             complement(319..1929)
                     /locus_tag="VF991_07420"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556306.1"
                     /translation="MMTYIKIGRRAFGAGALATGLVGKAAPSLAQGEPKRGGTLVATW
                     GGGEPQACYVPAGGGSSPTFSSSKLFERLGNRRMDGVFEGELAEAWKPAADFKSYTIK
                     IRKGVKFHDGKDMTTDDVVYSIDEIWKKYAAASAMTDFAGVEAPDADSVVVKFNKPVP
                     EFFFSSLLCGSVNYVVPKHVYAGSDPITNPANNAPIATGPWKFKEWVRGSHFEYVRND
                     AYWRKDMPYMDRLIIRYVRDPAGRAAAMEAGDIHIGVFNPVAPPDIKRLTATGKFVAT
                     PKGYEESVWSTSFEVNMRNPIFAKREVRQAMFHAIDRSFIAKTVYYGYARPGTGPIFS
                     PNTEFFTADTYKTNFDPKKAAALLDAAGFPKKADGKRFTLNLLAAGWFTENGKIGSFV
                     KQALEDVGVGINLTVPDRPTSIKRIYTDYDFDLAISNQANPSEPVPSTTQYYTSDGIK
                     KGVPFRNASGFHTDEVDALVEKIKVETDPAKRKTLVVEFQKITTLEAPNLPLVELESI
                     TVASTKVQNHSNDPNYLAATWHDVWLAS"
     gene            complement(2034..2462)
                     /locus_tag="VF991_07425"
     CDS             complement(2034..2462)
                     /locus_tag="VF991_07425"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9556307.1"
                     /translation="MSDKLVPLTKEELQGNLDHSPFIAFLGLKVTETDPAKEQITMTC
                     AMKPEFERGAGTGQWHGGPLAAIIDTVGDYALVMALRRGLPTINFRVDYLRPAIKTGL
                     TITAKVRRAGKSVGVVDIDVFNDQKALVAVGRATYSTLVA"
     gene            complement(2459..>2908)
                     /locus_tag="VF991_07430"
     CDS             complement(2459..>2908)
                     /locus_tag="VF991_07430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX9556308.1"
                     /translation="KAKRLAELGADKTINYVTHDFQDEAYKLYGKPTRRGGGTDRGLD
                     VVVNYTGGDTWVKSLKVLKVGGRLLTCGATAGFDPKEDIRFIWTFELKVLGSNGWARS
                     DIETLLRLVQEGKLKVLVDKVFKLAEAREALRVIEDREVFGKIVVAP"
BASE COUNT          474 a          911 c          956 g          567 t
ORIGIN      
        1 tcatcagctc gaggaagctg ccgggggcga gctggatcag acagaagttg atcaccacca
       61 cacccagcat cagcggcacc gcctggatca gccgccgccg caggagtttt agcgccgcga
      121 gttggcgtga gctggtgcct gttgatgtga ttgaggccat cgcccgctct tagctcccct
      181 catgttcctc tcccccgcca gggggagagg ttaggtgagg gggaatcgac gagtgtaacc
      241 ccctcacccg tcctctcccc ctggcggggg agaggggtat gaagggggag aggagaatga
      301 agaagagacg aacatccttc agctggccag ccatacgtcg tgccatgttg ccgccaggta
      361 gttgggatcg ttggaatggt tctgcacctt ggtgctggcg acggtgatcg attcgagctc
      421 gaccaacggc aggttgggtg cctccagcgt ggtgatcttc tggaactcga ccaccagcgt
      481 cttgcgcttg gcgggatcgg tctcgacctt gatcttctcg accagggcgt cgacctcgtc
      541 ggtatggaag cccgaggcgt tgcggaaggg cacgcccttc ttgatgccgt ccgacgtgta
      601 gtactgggtc gtcgacggca ccggctccga cgggttggcc tggttggaga tcgccaggtc
      661 gaaatcgtag tcggtgtaga tgcgcttgat cgaggtcggc cggtcgggaa ccgtgaggtt
      721 gatgccgacg ccgacgtctt ccagcgcctg cttgacgaac gagccgatct tgccgttctc
      781 ggtgaaccag ccggcggcca gcaggttgag cgtgaagcgc ttgccgtcgg ccttcttggg
      841 gaagccggcg gcgtcgagca gcgccgccgc tttcttggga tcgaagttgg tcttgtaggt
      901 gtcggcggtg aagaactccg tattgggcga gaagatcggg cccgtgcccg gccgggcgta
      961 gccgtaatac acggtcttgg cgataaagct gcggtcgatg gcgtggaaca tcgcctgccg
     1021 cacctcgcgc ttggcgaaga tcggattgcg catgttgacc tcgaacgagg tcgaccacac
     1081 cgactcctca tagcccttgg gcgtggcgac gaacttgccg gtcgcggtca gccgcttgat
     1141 gtcgggcggc gccacgggat tgaacacgcc gatatggatg tcgcccgctt ccatggcggc
     1201 agcgcggccg gccggatcgc gcacgtagcg gatgatcagg cggtccatgt agggcatgtc
     1261 cttgcgccag taggcgtcgt tcctgacgta ctcgaaatgg ctgccgcgca cccattcctt
     1321 gaacttccac gggccggtgg cgatcggcgc gttgttggcc gggttggtga tcggatcgct
     1381 gccggcatag acgtgcttgg gcacgacgta gttcacgctg ccgcagagca gcgaggagaa
     1441 gaagaactcg ggcaccggct tgttgaactt gacgacgacg ctgtcggcat cgggcgcctc
     1501 gacgccggcg aaatcggtca tcgccgaggc ggcggcgtac ttcttccaga tctcgtcgat
     1561 cgaatagacg acgtcgtccg tggtcatgtc cttgccgtcg tggaacttca cgcccttgcg
     1621 gatcttgatc gtgtaggact tgaagtcggc ggcgggcttc caggcttcgg cgagctcacc
     1681 ctcgaagaca ccgtccatcc tgcggttgcc caggcgctcg aacagcttgg acgaggagaa
     1741 ggtcgggctc gaaccgccac cggccggcac gtagcaggcc tgcggctcgc cgccgcccca
     1801 ggtggcgacc agggtgccgc cgcgcttggg ctcgccttgc gcaagtgacg gtgcggcttt
     1861 gccgacgagg cctgtcgcca gcgcgccggc accgaacgct cgacgcccga tcttaatgta
     1921 agtcatcatc atggcctcct tgccccgacg cctgacgcaa tccctgtgcc gttccctttc
     1981 attttcctct cccccgttag ggggagagga gactcgatcg ttagcgccgc acgctaggcc
     2041 accaacgtcg agtaagtggc ccgccccacg gcgaccaacg ccttctggtc gttgaacacg
     2101 tcgatatcga ccacgcccac gctcttgccg gcgcggcgca ctttcgccgt gatggtgaga
     2161 ccggtcttga tcgccggacg caggtaatcg acgcggaaat tgatggtcgg caggccgcgg
     2221 cgcaacgcca tcaccagcgc gtagtcgccg acggtgtcga tgatcgcggc cagcggtccg
     2281 ccatgccatt ggccggtgcc ggcgccgcgc tcgaactccg gcttcattgc gcaggtcatg
     2341 gtgatctgct ccttcgccgg atcggtctca gtcaccttca acccgagaaa ggcaatgaac
     2401 ggcgagtggt cgagattgcc ttgcagctct tccttggtca gcggcacaag cttgtcgctc
     2461 atggcgccac cacgatcttg ccgaacactt cgcggtcctc gatcacacgc agcgcctcgc
     2521 gcgcctcggc gagcttgaag accttgtcga ccagcacctt gagcttgccc tcctgcacga
     2581 gcctgagcag cgtctctatg tcggagcgcg cccagccgtt ggagcccagc accttgagct
     2641 cgaaggtcca gatgaagcgg atgtcctcct tgggatcgaa gcccgcggtg gcgccgcagg
     2701 tcagcaggcg gccgccgacc ttcagtacct tcagcgactt cacccaggta tcgccgccgg
     2761 tgtagttcac caccacgtcg aggccgcggt cggtgccgcc gccgcgccgc gtcggcttgc
     2821 cgtagagctt gtaggcctcg tcctggaagt cgtgcgtgac gtagttgatg gtcttgtcgg
     2881 cgccgagctc ggccagacgc ttggcctt
//
LOCUS       DASWGA010000305         1862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_664540, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000305 DASWGA010000000
VERSION     DASWGA010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_664540"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..920
                     /locus_tag="VF991_07435"
     CDS             93..920
                     /locus_tag="VF991_07435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF169 domain-containing protein"
                     /protein_id="HEX9556309.1"
                     /translation="MNVQTLPPGYKTAPWTPPEKIDGKMLAEATGKLIELLRIRTQPI
                     GMRLFEDPADMDKIQGVRKPTDGMKFTMCQMVTQSRWYGFTLGITVDNTRGGNCGGVV
                     GLNHPGEGFLSGDHMNGVWFGNKEASAAHQAQMPRVPDGKYNGLVVSPLRSARLDPPD
                     ICLFYGSPGQMIYFINGLQFHRYRRYDFTVTGESACADSWGSALATRQTSLSLPCYAE
                     RRYGGVADDELLMACPPDEFLRAIEGMGHLGKNGLRYPFPPYGAAMDPAFGMAKSYG"
     gene            922..1422
                     /locus_tag="VF991_07440"
     CDS             922..1422
                     /locus_tag="VF991_07440"
                     /inference="COORDINATES: protein motif:HMM:NF024952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HEX9556310.1"
                     /translation="MLYVVAWPVLAEADDTALRRLRAQYHPREADLIGPHFTLVFGAA
                     ASQEAKLHDALDGLAGRRPFWFVLDRLVRHDMTPPSRAAYLYAVPADGGAELTSLYDA
                     LNPAPGGEPFEPHITLGLFDRAADAEQVARIVERQHLPMHGRIEELALLRRDGDALDV
                     VKSVRL"
     gene            complement(1419..>1862)
                     /locus_tag="VF991_07445"
     CDS             complement(1419..>1862)
                     /locus_tag="VF991_07445"
                     /inference="COORDINATES: protein motif:HMM:NF013506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEX9556311.1"
                     /translation="FQAPTPAQSAAVSRELDTIYAEFTRQVGEARKLDGARLDAAARG
                     RVLSGGDAKKAGLVDELGGLQLALNIAKAKAGIDESRQVEIRRFPAESDRWQKVLERV
                     LRLGGVDASGPSLRAPREVREALARFGIVARPGNVRLPPLPPLWR"
BASE COUNT          280 a          670 c          624 g          288 t
ORIGIN      
        1 tggccgcgct ggtcgccaac gactacgtta ccggagagat cgtcatcgcc gatggtgggc
       61 tgaaccttac ctagccagac acggaggaaa ccatgaacgt ccagaccttg ccgccgggct
      121 acaagaccgc accctggact ccgcccgaga agatcgacgg caagatgctg gccgaggcga
      181 ccggcaagct gatcgagctt ttgcgcatcc gcacccagcc gatcggcatg cggctgttcg
      241 aggatcccgc cgacatggac aagatccagg gcgtgcgcaa accaaccgac ggcatgaaat
      301 ttaccatgtg ccagatggtg acccagtcgc gctggtacgg cttcacgctt ggcatcaccg
      361 tcgacaatac gcgcggcggc aattgcggcg gcgtggtcgg gctcaaccat cccggcgagg
      421 gtttcctctc gggcgaccac atgaacggcg tgtggttcgg caacaaggaa gcctcggccg
      481 cgcaccaggc gcagatgccc cgcgtgcccg acggcaagta caacggcctc gtcgtgtcgc
      541 cgctgcgctc ggcccggctc gatccgccgg acatctgcct gttctacggc tcgcccggcc
      601 agatgatcta tttcatcaac ggcctgcagt tccaccgcta ccgccgttac gacttcaccg
      661 tcaccggcga gagcgcctgc gccgattcgt ggggcagtgc gcttgccacc cgccagacct
      721 cgctgtcgct gccctgctat gccgagcggc gctacggcgg cgtggccgac gacgagcttt
      781 tgatggcctg cccgcccgac gagttcctgc gcgccatcga gggcatgggc catctcggca
      841 agaacggcct gcgctatccg ttcccgccct acggcgcggc gatggatccc gccttcggca
      901 tggccaagag ctacggctga catgctctat gtcgtggcct ggccggtgct ggccgaggcc
      961 gacgacaccg ccctgcgccg gctcagggcg cagtaccatc cgcgcgaggc cgacctgatc
     1021 ggcccgcact tcaccctggt gttcggcgcg gccgcttcgc aggaggccaa gctgcacgac
     1081 gcgctcgatg ggctcgcggg ccggcggccg ttctggttcg tgctcgaccg cctggtccgc
     1141 cacgacatga cgccgccctc gcgcgcggcc tacctttatg cggtgccggc cgacggcggc
     1201 gccgagctca cgagtctcta cgacgcgctc aatccggcgc cgggtggcga accgttcgag
     1261 ccgcacatca ccttgggcct gttcgatcgc gcggccgacg ccgagcaggt ggcccgcatc
     1321 gtcgagcgcc agcacctgcc catgcacggc cggatcgaag agttggcgct gctgcgccgc
     1381 gacggcgacg cgctcgacgt cgtgaagagc gtccgcctct agcgccagag cggcggcagc
     1441 ggcggcaggc ggacgttgcc gggccgcgcc acgatgccga agcgggccag ggcctcgcgc
     1501 acctcgcgcg gcgcgcgcag gctcgggccg ctggcgtcga cgccgcccag ccgcagcacg
     1561 cgctccagca ccttctgcca gcggtcggac tcggccggga agcggcggat ctcgacctgc
     1621 ctcgattcat cgatgccggc cttggctttg gcgatgttga gcgcgagttg caggccgccc
     1681 agctcgtcga ccaggccggc cttcttggcg tcgccgccgg acaagacgcg gccgcgggct
     1741 gccgcatcga gcctggcgcc gtcgagcttg cgggcttcgc cgacctggcg cgtgaactca
     1801 gcgtagatcg tgtcgagctc acgcgatacg gcggcgctct gcgccggcgt gggcgcctgg
     1861 aa
//
LOCUS       DASWGA010000306         1531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_287993, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000306 DASWGA010000000
VERSION     DASWGA010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287993"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VF991_07450"
     CDS             complement(<1..222)
                     /locus_tag="VF991_07450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HEX9556312.1"
                     /translation="MPDLRHGNLLSALPRGGAAERVEVLAQGAAVRIERIVSTGQASP
                     PGFWYDQAEAEWVLLLAGAARLRFADEPEA"
     gene            complement(227..460)
                     /locus_tag="VF991_07455"
     CDS             complement(227..460)
                     /locus_tag="VF991_07455"
                     /inference="COORDINATES: protein motif:HMM:NF022833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2798 domain-containing protein"
                     /protein_id="HEX9556313.1"
                     /translation="MKKLPARLNRYAVPLGTSFFMTLLVSGVATYRALGWGPGVLAIW
                     MVSWMISWAVAFPTMLIMMPVVRRAFAKIIDEN"
     gene            537..>1531
                     /locus_tag="VF991_07460"
     CDS             537..>1531
                     /locus_tag="VF991_07460"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9556314.1"
                     /translation="MSLALPFQTAKQLAAAVRKKKIGCLELLDLYLKRVEAYNPELNA
                     IIATDVEGARKRAKAADKAVKAGKKLGPLHGVPMTIKESFDVTGLPTTWGFPPLKDHK
                     AQGNALVAQRMIDAGVTLFGKTNVPLMLADYQSFNDIHGTTNNPWDHTRTPGGSSGGA
                     SAALAAGLTGIEAGSDIGSSIRNPAHYCGVFGHKPTWDVVSPKGHAIGGVVSQADIAV
                     VGPLARGAEDLEIAMDVMAGPDEIDGRGWRLALPRSKKKNLRDFKVAVLLDDRHAEVD
                     QSVQAEIQKLADFLGKKKAKVSDKARPAFDTAQIHEVYMRLLRAATSARTPADEY"
BASE COUNT          284 a          553 c          492 g          202 t
ORIGIN      
        1 cgcctcgggc tcgtcggcga agcgcagccg cgccgcgccg gcgagcagca gcacccactc
       61 ggcctccgcc tggtcgtacc agaagccggg cgggctcgcc tggccggtcg agacgatgcg
      121 ctcgatgcgc acggccgcgc cctgcgccag cacctcgacc cgctcggccg ctccgccgcg
      181 cggcaacgcc gacagaagat tgccgtggcg caggtcaggc atcgcctcaa ttctcgtcga
      241 tgatcttggc gaacgcgcgc cgtaccaccg gcatcatgat cagcatggtc gggaaggcga
      301 ccgcccagga gatcatccag gacaccatcc agatcgcaag cacgccgggg ccccagccca
      361 acgcccggta agtggcgacg ccggacacca gaagggtcat gaaaaacgac gtgcccagcg
      421 gcacggcgta gcggttgagg cgggcgggaa gcttcttcac ggcggtttct tcacgagcga
      481 gggcacaata tggtacggcc tctgtcgtcg tccatcgccc gcaggaatcc gtccccatgt
      541 ccctcgctct gccgttccag accgccaagc agctcgccgc cgcggtccgc aagaagaaga
      601 ttggctgcct cgaacttttg gacctctacc tcaagcgggt cgaagcctac aatcccgagc
      661 tcaacgccat catcgccacc gacgtcgaag gcgcgcgcaa gcgggccaag gcggccgaca
      721 aggcggtgaa ggccggcaag aagctcgggc ccctgcacgg cgtgccgatg accatcaagg
      781 aatcgttcga cgtcacgggc ttgcccacga cctggggctt tccgccgctc aaggaccaca
      841 aggcgcaagg caacgccctg gtcgcccagc gcatgatcga cgccggcgtc acgctgttcg
      901 gcaagaccaa cgttccgctc atgctggccg actaccagag cttcaacgac atccacggca
      961 cgaccaacaa tccgtgggac cacacccgca cgcccggcgg ttcttccggc ggcgccagcg
     1021 cggcgctggc ggccggcctg accggcatag aggccggcag cgacatcggc tcgtcgatcc
     1081 gcaaccccgc gcactattgc ggcgtgttcg gccacaagcc gacctgggac gtcgtcagtc
     1141 cgaagggcca cgcgatcggc ggggtcgtct cgcaggccga catcgccgtg gtcgggccgc
     1201 tggcgcgcgg cgccgaggat ctggaaatcg ccatggacgt catggcgggg cccgacgaga
     1261 tcgacggccg cggctggcgc ctcgccctgc cgcggtccaa gaaaaagaac ctgcgcgact
     1321 tcaaggtcgc ggtgctgctc gacgaccgcc atgccgaggt cgaccagtcg gtgcaggccg
     1381 agatccagaa gctcgccgac ttcctcggca agaagaaggc caaggtgagc gacaaggccc
     1441 gcccggcctt cgacaccgcg cagatccacg aggtctatat gcgcctgttg cgcgccgcga
     1501 cctcggcccg cacgccggcc gacgagtaca a
//
LOCUS       DASWGA010000307         2510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1934417, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000307 DASWGA010000000
VERSION     DASWGA010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1934417"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VF991_07465"
     CDS             <1..412
                     /locus_tag="VF991_07465"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9556315.1"
                     /translation="GQAINDLIAGHVKIASLGSSPLIPHYKAGTIRLLAQSTAARSPG
                     LLEVPTFQEAGVSGLVLDQWIGVFVPTGTPAPIAARLNAEINKALAEGAIRASLLQQA
                     QEPVGGTAEQAERLFRDDFAKYGRLVKELNIHAY"
     gene            958..2067
                     /locus_tag="VF991_07470"
     CDS             958..2067
                     /locus_tag="VF991_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018407623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556316.1"
                     /translation="MKKTSLAVSGACALLSPWLLVGSVAPARAAELPSYFKDIVGTSV
                     TSPGDIANKNILQLNTTMFELYGDAAQMFQKTILAQHPVILGLFSGAGGRFILYRPRM
                     APIDAPPVPIVYQLLKSVGHSTMALGEIVIPYLNSPNDPAWRGSMAAYRSRMQSALDS
                     LDAAAMPDDWRLNNRGILQNNIAFMDECLKNNAISPDALQNFSKKQGPLLKKNIAWAA
                     QTQVGHWMDVIGGWKQMLGTDWDKAYAASNTIYVARQNNVLFSVLAQYFGPEAINDRL
                     ILIETISFTTTPDDMLDSLTRIIADRSVGAAFFGNYYLMDYELMGGDARQAIIDEAAK
                     RKIGVTLPPQVPFGSRQWPTLITPGPGAKSLGDLP"
     gene            2153..>2510
                     /locus_tag="VF991_07475"
     CDS             2153..>2510
                     /locus_tag="VF991_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEX9556317.1"
                     /translation="MNLNTVVEVKRPGSADEIDEWRDGYAWLAGGTWLFSEPQWTIDT
                     LIDLEELRWPALQASSAGLEIAATCRIAELYRFEAPAEWTGAPLFRHCCDSLLASFKI
                     WNAATVGGNICMSLPAG"
BASE COUNT          442 a          834 c          813 g          421 t
ORIGIN      
        1 cggacaggcg atcaacgacc tgatcgccgg tcacgtgaag atcgcctcgc tcgggtcttc
       61 cccgctcatc ccgcattaca aggccggcac gatccggctg ctggcgcaat cgacggcggc
      121 gcgctcgccg ggtctcctgg aggtgccgac ctttcaggaa gcgggcgtca gcgggctggt
      181 gctcgaccag tggatcggcg tgttcgtgcc cacggggacg ccggcgccga tcgccgcccg
      241 gctcaacgcc gagatcaaca aggcgctggc ggaaggcgcg atccgcgcga gcctgctgca
      301 gcaggcacag gagccggtcg gcggcaccgc cgagcaggcc gagcgtctct tccgcgacga
      361 ctttgccaag tatgggcggc tggtgaagga gctgaacatc catgcctatt agaccgtgtt
      421 tcggtgaggt ataatcagcg ctacagcaaa tccgctgcgc tggatttata cgctgcgagc
      481 gtgccgcagg ctccacctct ccccgcttgc ggggagaggt cggcgccgaa ggcgccgggt
      541 gagggggact ctccacggcc tgagtgcttg gtgagtcccc ctcaccccga ccctctcccc
      601 gcaagcgggg agagggagcg caccgagctt gcggctccag ctgataacac ctcaacggaa
      661 cgtgctctag aagagggatg caatgtcggc ggtcggcagc tcggtcgaga aaattttagt
      721 cgatccgcga tcatctcccg caagcctggg caacgacctc tccaacttgc gatcgctcgc
      781 gaggaaagct agacttcgtg tgcttggcgt tggcgattcg ggcgaggggg aatcctcggg
      841 cgccaggact taagactcgc ggaaaatatc gtccgcaccg ccatcgggcg cgccccgcca
      901 cgggccggca gccatgcgga ttgccgcgag cggacgcgtc gcaactggga gacacacgtg
      961 aaaaagacct cgcttgcggt gagcggcgcg tgcgcgctgc tgtcgccttg gctgttggtc
     1021 ggatcggttg cgccggcacg cgcggccgag ctgccgtcct acttcaagga catcgtggga
     1081 acgtcggtga ccagccccgg cgatatcgcc aacaagaaca tcctgcagct caacaccacc
     1141 atgttcgagc tctatggcga cgccgcgcaa atgttccaga agaccatcct ggcccagcac
     1201 cccgtcatcc tcgggctgtt ctcgggcgcc ggcggacggt tcatcctgta tcgtcccagg
     1261 atggcgccga tcgacgcgcc tccggtgccg atcgtctatc agttgctcaa atccgtcggc
     1321 cacagcacca tggcgctggg cgagatcgtc attccatatc tgaacagccc caacgacccg
     1381 gcctggcgcg gctcgatggc ggcgtaccgc agccggatgc agtccgcgct cgacagcctc
     1441 gatgcggccg ccatgccgga cgactggcgg ctgaacaacc gcggcatcct gcagaacaac
     1501 atcgcattca tggacgagtg cctgaagaac aacgcgatct cgcccgacgc gctgcagaat
     1561 ttttccaaga agcaggggcc gttgctgaag aagaacatcg cctgggcggc gcagacccag
     1621 gtcggccact ggatggacgt gatcggcggc tggaagcaga tgctcgggac cgactgggac
     1681 aaggcctacg cggccagcaa caccatttac gtcgcccgcc agaacaacgt cctgttcagc
     1741 gtgctggcgc agtatttcgg tccggaggcc atcaacgacc ggctgatcct gatcgagacc
     1801 atctcgttca ccaccacgcc cgacgacatg ctggattcgc tcacccgcat catcgccgac
     1861 cgttccgtcg gtgcggcatt cttcggcaac tattatctga tggactacga gctgatgggc
     1921 ggcgatgcgc gccaggcgat catcgacgag gccgccaagc gcaagatcgg cgtgaccctg
     1981 ccgccgcagg ttccgttcgg ctcgcgccaa tggccgacgc tgatcacgcc cggccccggc
     2041 gccaagtcgc tcggcgatct tccttgacgt cgcgacgttc gcccggagcg cgcacgcgag
     2101 ccgtgcgcgc gccgtcggcg acgccggcgg gtcgaccctc ggagacgacc gcatgaatct
     2161 gaataccgtc gtcgaggtca aacgcccggg ctcggccgat gagatcgatg agtggcgcga
     2221 cggttacgcc tggctcgccg gcggaacctg gctgttctcg gagccgcagt ggacgatcga
     2281 cacgctcatc gacctcgagg agttgcgctg gccggcgctg caggcttcat cggccggcct
     2341 cgagatcgcg gccacttgcc ggattgccga gctctatcgt ttcgaggcgc cggcggagtg
     2401 gaccggcgcg ccgctgtttc gccactgctg cgattcgttg ctggcatcgt tcaagatttg
     2461 gaacgcggcc acggtcggcg gcaacatctg catgtcgctg ccggccggcc
//
LOCUS       DASWGA010000308         2967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_544833, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000308 DASWGA010000000
VERSION     DASWGA010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_544833"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(19..954)
                     /locus_tag="VF991_07480"
     CDS             complement(19..954)
                     /locus_tag="VF991_07480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018858030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556318.1"
                     /translation="MLLVLARRLGNVIPTLLAVVALVFLLFSVLPGSFISGMNEDGRS
                     QIDPAVMERMRKEMGLDDPLIERFVKYVAHTAMGDLGISFRTREPVTKLIGVRVWPSL
                     KLVLAAMTFAISVGVTLGFLAALRPGSLIDTISMVGAISGLSLSQFWFGLMLMYLFAL
                     QLNWLPSFGYGDGGLRYLILPAVALGVGPMALLARTTRAAVLDILNADFIRTARSKGM
                     SERRVVEWHVLRNALVLVITIVGLQFGSLMGQAVVVEKLFAWPGVGSLMVDSVFQRDM
                     PAVQGCILMIVLFFLLINTLVDIAYVVIDPRIRYG"
     gene            complement(1101..2693)
                     /locus_tag="VF991_07485"
     CDS             complement(1101..2693)
                     /locus_tag="VF991_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556319.1"
                     /translation="MRKLIWLAAATAAIASAGAAQAQDTPRKGGTIRMTAPYAASFGS
                     LDPHTTPRAQDDIVSKALQRTLYNWDSKDGKLVLELAKSVTPAEDGLTYTYKLRDDAF
                     FHNGRKMTADDIIWSFTRIMDGSKGYPAARYVRIIKGAIDVEKNQAKEISGLKKIDDF
                     TLEMTLTDKVDPAYYFLPGSTAILPKEEVEKGNFAANPVGLGPFKFKEHVPGSRVVAE
                     RWEKFYKPGKPYADKVEVLIMAEAAARDVAFRNKEIDTSILGPAQYVAYRADPELSKG
                     ILEVAEMFTRAVTFNHGHKPFQDKRVRQAFNHAIDTDLIIKRLVKDKAYRAVSWLPLS
                     SPAFDKTVKPYAFDPDKAKKLLVEAGYPDGFEFELTTSQNESWGLPIVEAIIPMLAKV
                     GIKVKPKLVEVTVLTDIAMKGEHQAYIGSNLTGPDSLTTLRCYYSKTPRTACNYTGYN
                     NPAFDKLLDDAAASLDPAKRNDLLRQANNLIYDEAPVWFFNYNKAVLAYQPWIHGLQA
                     NPTEITHQYVEDIWVDAKSPAK"
     gene            2768..>2967
                     /locus_tag="VF991_07490"
     CDS             2768..>2967
                     /locus_tag="VF991_07490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556320.1"
                     /translation="MTNLPNCLLIVTAEVDAAVEADWNRWYDDVHLPDALACPGVQAG
                     RRYVTTGEVSESDRGQGRRTRT"
BASE COUNT          534 a          910 c          985 g          538 t
ORIGIN      
        1 ccacttcacc ggccggcctc agccatagcg gatacgcgga tcgatcacga cgtaggcgat
       61 gtcgaccagg gtgttgatga ggagaaagaa cagcacgatc atcaggatgc agccctggac
      121 cgccggcatg tcgcgctgga ataccgaatc gaccatcagc gatcccacgc ccggccaggc
      181 gaacagcttc tcgacgacca ccgcctggcc catcagcgag ccgaactgca ggccgacgat
      241 ggtgatcacc agcaccaggg cattgcgcag cacgtgccat tcgacgacgc ggcgctcgct
      301 catgcccttg ctgcgggcgg tgcggatgaa atcggcattg agaatgtcga gcacggcggc
      361 gcgcgtggtg cgcgccagca gcgccattgg gccgacgccc agcgcgaccg cgggcaggat
      421 gaggtagcgc aggccgccgt cgccatagcc gaagcttggc agccagttta gctgcaacgc
      481 gaacaggtac atcagcatca ggccgaacca gaactgcgac agcgacaggc ccgagatggc
      541 gccaaccatc gatatcgtgt ctatgaggct gccggggcgc agtgcggcga ggaatcccag
      601 ggtgacgccg accgagatgg cgaaggtcat ggcggccagc accagcttga gcgacggcca
      661 gacgcgaacg ccgatcagct tggtcaccgg ctcgcgggtg cgaaacgaga tgccaaggtc
      721 gcccatggcg gtatgggcga cgtacttgac gaagcgctcg atcagcgggt cgtccagccc
      781 catctccttg cgcatgcgct ccatcaccgc cgggtcgatc tgcgaacggc catcctcgtt
      841 catgccggag atgaagctcc cgggcaggac gctgaacagc aggaagacca acgcgacgac
      901 agcaagcaag gtcgggatga cgttgccaag gcgacgggcg agcacgagca gcatcaggtc
      961 aacgtgcgcc tttcaatgaa atcatgctcc tctcccccgc tgaggggaga ggacgggtga
     1021 gggggatgcg cgcgtcgttg gccccctcac ctagcctctc cccctagcgg gggagaggaa
     1081 tatgagtggc tgagaagcga tcacttcgcc ggcgacttgg cgtcgaccca gatgtcctcg
     1141 acatattggt gggtgatctc ggtcgggttg gcctgcaggc cgtggatcca cggctgatag
     1201 gccagcaccg ccttgttgta gttgaagaac cacaccggcg cttcgtcgta gatcaggttg
     1261 ttggcctggc gcagcaggtc gttgcgcttg gccgggtcga ggctggccgc ggcgtcgtcc
     1321 agaagcttgt cgaacgccgg gttgttgtag ccggtatagt tgcaggccgt gcgcggcgtc
     1381 ttggagtagt agcagcgcaa ggtggtgagc gaatcaggcc cggtcaggtt cgagccgata
     1441 taggcctggt gctcgccctt catggcgatg tcggtcagca ccgtcacttc caccagcttg
     1501 ggcttcacct tgatgccgac cttggccagc atggggatga tcgcctcgac gatcggcagg
     1561 ccccagctct cgttctggct ggtcgtcagc tcgaactcga agccgtcggg ataacccgcc
     1621 tcgaccagca gcttcttggc cttgtcgggg tcgaaggcat agggcttcac ggtcttgtcg
     1681 aaggccggcg aactcagcgg cagccagctc acggcgcgat aggccttgtc cttgaccagc
     1741 cgcttgatga tcaggtcggt atcgattgcg tggttgaagg cctggcgcac gcgcttgtcc
     1801 tggaacggct tgtggccatg gttgaaagta acggcgcgcg tgaacatctc ggccacttcg
     1861 aggatgccct tggagagctc gggatcggcc cgataggcga cgtactgagc ggggccgaga
     1921 atcgaggtgt cgatctcctt gttgcggaac gccacgtcgc gcgcggcggc ctcggccatg
     1981 atcagcactt cgactttgtc ggcgtagggc ttgccgggct tgtagaactt ctcccagcgc
     2041 tcggccacga cacgcgaccc gggaacgtgc tccttgaatt tgaacgggcc caggcccacc
     2101 ggattggcgg cgaaattgcc cttctcgacc tcttccttgg gcaggatggc ggtcgagccc
     2161 ggcaagaagt agtaggccgg gtcgaccttg tcggtcagcg tcatttcgag cgtgaagtcg
     2221 tcgatcttct tgaggcccga gatctccttg gcttggttct tctcgacatc gatggcgccc
     2281 ttgatgatgc ggacgtaacg cgccgccgga tagcccttgc tgccgtccat gatgcgcgtg
     2341 aacgaccaga tgatgtcgtc cgccgtcatc ttgcggccgt tatggaaaaa ggcgtcgtcg
     2401 cgcagcttgt aggtataggt gagcccgtct tccgccggcg tcaccgactt ggcaagctcg
     2461 agcaccagct tgccgtcctt cgagtcccaa ttgtagagcg tgcgctgcag cgccttgctg
     2521 acgatatcgt cctgcgcgcg cggcgtggtg tgtgggtcga ggctgccgaa gctcgcggca
     2581 tagggcgcgg tcatccggat cgtgccgccc ttgcgcggcg tgtcctgggc ctgtgctgca
     2641 cccgctgagg cgatcgccgc cgtcgccgcc gccagccaaa tcagtttgcg catgaagccc
     2701 cctcttgaac aatccggttg gccggcattc catcgtgccg gacgcatcag tgcaagagga
     2761 atgccgaatg accaacctgc ccaattgcct gctcatcgtg acggcggaag tcgatgccgc
     2821 ggtcgaagcc gactggaacc gctggtacga cgacgtgcac ctgcccgatg ccttggcctg
     2881 tcccggcgtg caggcgggcc ggcgctacgt tacgacgggc gaggtctccg aaagtgaccg
     2941 aggtcaaggc cggcggacgc ggaccaa
//
LOCUS       DASWGA010000309         4460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1556863, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000309 DASWGA010000000
VERSION     DASWGA010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4460
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556863"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..587)
                     /locus_tag="VF991_07495"
     CDS             complement(<1..587)
                     /locus_tag="VF991_07495"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEX9556321.1"
                     /translation="MMRKLTKAVIEDFAELGEIIGQALEGYWRELGELGEDPVRTRQG
                     LVAACSVVLATVLALALEVESPWWAAISGFMSVMATGAGSLRRGLLRMTGTVAGALLG
                     FVMARWLPYDHFALCLFLAATTMLGVIAMQVSPHGLAWLFLTITSSLVLLSSLDNPLN
                     AVDIAFYRTFEVAIGVTSAVIVANLLQDWHADPPPT"
     gene            complement(584..1555)
                     /locus_tag="VF991_07500"
     CDS             complement(584..1555)
                     /locus_tag="VF991_07500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX9556322.1"
                     /translation="MIAVGGTLLLLFIAWETFTYFVAYTDDAYVRSDLVAVAPEVTGR
                     IIAVHVVDNQEIKLGAKLISIDPTPFQLEVNQRQAQIEEQTSLVKVSQEQLATAQAAL
                     DAATSTHTYAVEQQARYAVLAASNNAPRAELDRANDELRRATAEMTISQVAIAKARTS
                     INAHQAALDVAKAEMATAEWKLSRTDVLSPTDGTITNLTTRAGDTATVNIPMIGIVDA
                     NAWRVIANYKQYYVRSFEVGDTAWVWLDSAPWRFYRARITGIARGFSRDSQAPMLLPY
                     VAPTTDWIRLQRRIPVTIVLDEQPPGGKLYMGADARTVIFPEGGTVR"
     gene            complement(1919..2623)
                     /locus_tag="VF991_07505"
     CDS             complement(1919..2623)
                     /locus_tag="VF991_07505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556323.1"
                     /translation="MAEIVALGILFAIVVTEIELAAGFDLLDAPFFHSPPLAMALAIA
                     ALAFAGWQARPTATATGMAAGVLAFGIAVLPFDALSERPPMPVDFWKGNAGLLLARTM
                     TVDRPHSVVLVIKGAQQIANAAAGGQVGARDVLGADVIVARLAGEPPASLTVVPDKDQ
                     PQPISLTADMRWAWSVTPRQHGPQRLVLHLNSVTKNSGKDTLSSLYRQLVLITVQPPS
                     WYEAGRKWLIDLVSGS"
     gene            complement(2660..3514)
                     /gene="nudC"
                     /locus_tag="VF991_07510"
     CDS             complement(2660..3514)
                     /gene="nudC"
                     /locus_tag="VF991_07510"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: protein motif:HMM:NF001299.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000210 - NAD+ diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HEX9556324.1"
                     /translation="MIELASSGAARFVPIDTEKNLVKTGGNPEAVFLQGMMGRAIANA
                     ADTQIFLGYVEGTPYFAVDVSGKDVPLKELGEFVDLRQVGALLFAREGSILAYARGMT
                     YWHRRHRYCGVCGASTKVIRGGHVRQCTNENCKTEHFPRTDPAVIMLVHHRDKCLLGR
                     GKHFPRGMHSTLAGFVEPGESFEDAVAREVYEEVKVRVKNVTYRSSQPWPFPASVMIG
                     FHAEAESLDFSVNESELENALWLSRDELRPENLPKDGSFFMPRRDSIARRLIEEWLGH
                     EAGPSISG"
     gene            complement(3715..>4460)
                     /locus_tag="VF991_07515"
     CDS             complement(3715..>4460)
                     /locus_tag="VF991_07515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="heterodisulfide reductase-related iron-sulfur
                     binding cluster"
                     /protein_id="HEX9556325.1"
                     /translation="GDATVVIFADTLSNNFEPDLLHAARRVLAAAGHRVAIAWPTLGA
                     PALCCGRTYLATGQVEKAKGEARRLLQALMPFVAKGVPIVGLEPSCLFSLRDEFLVLG
                     LGEEAKAVADNAFLFEEFLVREKKAGRLALDLKPLPQKTALLHGHCHQKAFGAMSAVQ
                     EALSLVPELAVSVIDSSCCGMAGSFGYEAEHYATSIAMAELSLLPAVRKADPEALIVA
                     DGTSCRHQIADGSNRQAVHVAEVLARALA"
BASE COUNT          738 a         1464 c         1529 g          729 t
ORIGIN      
        1 gtcggcggcg ggtcggcatg ccagtcctgc agcaggttgg ccacgatgac ggcggacgtc
       61 acgccgatcg ccacttcgaa cgtccggtag aaggctatgt cgaccgcgtt cagcgggttg
      121 tccaggctcg acagcagcac caggctcgag gtgatggtga ggaacagcca ggcgagcccg
      181 tgcgggctca cctgcatggc gatcacgccc agcatggtgg tcgcggccag gaacaggcag
      241 agcgcaaagt ggtcgtaggg cagccagcgc gccatgacga agcccagcag cgcaccggcc
      301 accgtccccg tcatccgcag caggccgcgg cgcagcgagc cggcgcccgt cgccatcacc
      361 gacatgaacc cgctgatcgc tgcccaccac ggcgattcga cttcgagcgc cagcgccagc
      421 acggtcgcca gcaccaccga gcaggccgcc accaggcctt gccgcgtgcg caccggatcc
      481 tcgcccagct cgccgagttc ccgccaatag ccctcgagcg cctggccgat tatctcgccg
      541 agctcggcga agtcctcgat caccgccttg gtgagcttgc gcatcatcgg acggtgccgc
      601 cttcggggaa aatgaccgtg cgggcatcgg ctcccatgta gagcttgccg cccggcggct
      661 gctcgtcgag cacgatcgtc acgggaatgc gccgctgcag gcgaatccag tcggtggtcg
      721 gcgcaacata gggcaacagc atcggcgcct gcgaatcgcg gctgaaaccg cgggcgatgc
      781 cggtgatcct ggcccgatag aagcgccacg gtgcgctgtc gagccaaacc caggcggtgt
      841 ccccgacctc gaaggagcga acgtagtact gcttgtagtt ggcgatgacg cgccaggcgt
      901 tggcatcgac gatgccgatc atcgggatgt tcacggtcgc ggtgtcgccg gcgcgcgtgg
      961 tgaggttggt gatcgtgccg tcggtcggcg acagcacatc ggtgcgactg agcttccact
     1021 cagccgtcgc catttccgcc ttggcgacat cgagcgcggc ctggtgggca ttgatgctgg
     1081 tccgcgcctt ggcgatcgcc acctgcgaga tcgtcatctc cgccgtggca cggcgcagtt
     1141 cgtcgttggc gcggtcgagc tcggcgcgcg gcgcgttgtt ggacgcggcc agcacggcgt
     1201 agcgtgcctg ttgctcgacg gcataagtgt gagtcgacgt cgcggcatcg agagccgcct
     1261 gcgccgtcgc cagttgttcc tgcgaaacct tgaccaggga ggtttgctct tcgatctgcg
     1321 cctgccgctg attgacctcg agctggaacg gcgttggatc gatgcttatc agcttggcgc
     1381 cgagcttgat ctcctgattg tcgacgacat gaacggcgat gatgcggccc gtcacctcgg
     1441 gcgccaccgc caccaggtcc gagcgcacat aggcgtcgtc ggtgtaggcg acgaaataag
     1501 tgaaggtctc ccaggcgata aacaacagga gcagcgtgcc gccgacagcg atcacccggc
     1561 gcaacctgct gcgcgcggtc ttggacaggg gcgccgatgc gggggccggc gcaacggcgg
     1621 tcggcgcggc ggcaggaggc ggttcggcca ccggcgccgg tggtgccggc ggcggccgct
     1681 tggcggctgg cggctcagcg cccggctgag acggctccac gggctgcgcg gccggcttgg
     1741 ccggagcggg tgcaacctcg gaagccggcg ctgcaacagg cgtcggcctg gcctcggcag
     1801 gcgccgaagg ggcgtcggcc ggcggttggg gtggggctga gtcagggctc atcgactcta
     1861 aatttacgct cccccgcccg gcaggcaaag gccaccgccg aagatcatcc aaggccagtc
     1921 atgaccccga caccaggtcg atcagccatt tgcggccagc ttcgtaccac gacggtggct
     1981 gcacggtgat caggacgagc tggcgataga ggctgctcag cgtgtccttg ccgctgtttt
     2041 tggtaacgct gttgagatgg aggaccagcc tctgcggacc gtgctgtcgg ggggtgactg
     2101 accatgccca gcgcatgtcc gccgtcaggc ttatgggctg gggttggtcc ttgtcgggaa
     2161 cgacagtcaa agacgcaggc ggttcgccgg ccaggcgcgc cacgatgacg tcggcgccca
     2221 agacatcgcg agccccgacc tgaccgccgg ccgccgcatt ggcgatctgt tgcgcgccct
     2281 ttatcaccag aaccaccgaa tgaggtcggt cgactgtcat ggtgcgcgcc agcagcagcc
     2341 ccgcattgcc cttccagaaa tccaccggca tcggcggccg ctcggacagg gcatcgaacg
     2401 gcagcacggc gatgccgaag gcgagcacgc ccgccgccat gccagtcgct gtcgccgtgg
     2461 gccgcgcttg ccagccggca aaggccagcg cggcgatggc gagcgccatc gccaacggcg
     2521 gcgaatggaa gaacggcgca tcgagaaggt cgaagcctgc agcgagctcg atttcggtca
     2581 cgacaatggc gaacaggatg ccgagtgcga cgatctccgc catacgccga agccatcgag
     2641 cgttcatggc gggcgggatc tatccactga tcgacgggcc ggcctcgtgg cccagccatt
     2701 cctcgatcag gcggcgggcg atggaatcgc ggcgcggcat gaagaacgag ccgtccttgg
     2761 gcagattctc gggccgcagt tcgtcgcggc tcagccacag cgcgttttca agttcggatt
     2821 cgttgacgct gaagtcgagc gactcggcct cggcgtggaa gccgatcatc accgaggcag
     2881 gaaatggcca gggttgggag gagcggtagg tgacgttctt cacgcgcacc ttgacttcct
     2941 cgtagacctc gcgcgccacg gcatcctcga agctctcgcc cggttcgacg aagccggcca
     3001 gcgtggagtg catgccgcgg ggaaaatgct tgccgcggcc cagcaggcac ttgtcgcggt
     3061 gatggaccag catgatcacc gccgggtcgg tgcgcgggaa gtgctcggtc ttgcagtttt
     3121 cgttggtgca ttgccgcaca tggccgccgc ggatcacctt ggtgctggcg ccgcacacgc
     3181 cgcaatagcg gtggcggcgg tgccagtagg tcatgccgcg ggcataggcc aggatcgagc
     3241 cttcgcgcgc gaacaggagc gcgccgacct ggcgcagatc gacgaactcg ccgagctcct
     3301 tcagcggcac gtccttgccg ctgacatcga cggcgaaata gggcgtgcct tcgacgtagc
     3361 ccaggaagat ctgggtgtcg gcggcgttgg cgatggcgcg gcccatcatg ccctgcagga
     3421 acactgcttc ggggttgccg ccggtcttca ccaggttctt ctcggtgtcg atcggcacga
     3481 agcgcgccgc cccggaggag gccagctcga tcatgcgctc ctcgtcctcg cgctcgtggc
     3541 tggcgcggtc gatttcagcg ctggaataag ggtttctgga tcgttgctgc atggcgcgcg
     3601 gaccgtgcca cagcaggcgc gtggctgcaa tctttgctgg gagcgcgcca ctccgtggcg
     3661 cttcttcatc aacaaactat gagcgccacg gagtggcgcg ctcccagcga tgagttaggc
     3721 caacgcccgt gccaggactt cggcgacgtg taccgcctgt cggttgctac cgtcggcgat
     3781 ctgatgccgg cacgacgtgc cgtcggccac gatcagcgct tcgggatcgg ccttgcgcac
     3841 ggcgggcagc aacgacagct cggccatggc gatcgacgtc gcgtaatgct cggcctcgta
     3901 gccgaagctg ccggccatgc cgcagcagct cgagtcgatc acgctgacgg caagctcggg
     3961 caccagcgac agcgcctcct gcacggcgct catggcgccg aacgccttct ggtggcagtg
     4021 gccatgcagc agggccgtct tctgcggcag cggttttagg tccagggcca gtcggcccgc
     4081 tttcttctcg cgcaccaaaa attcctcgaa caggaatgca ttgtcggcga cggccttggc
     4141 ctcctcgccc agcccgagga cgaggaattc gtcgcgcaag ctgaacaagc atgaaggttc
     4201 cagtccgacg atcggcacgc ctttggcgac gaacggcatc agtgcctgca acagccgccg
     4261 cgcctcgccc ttcgccttct cgacctggcc ggtcgccaga tacgtgcgcc cgcagcacag
     4321 cgccggcgct cccaaggtcg gccaggcgat ggcgacgcga tggccggcgg ccgcgagcac
     4381 gcggcgcgcg gcatgcaata ggtccggctc gaaattgttg gacaaggtgt cggcgaagat
     4441 caccaccgtg gcgtcgccct
//
LOCUS       DASWGA010000310         3156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_665067, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000310 DASWGA010000000
VERSION     DASWGA010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3156
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_665067"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VF991_07520"
     CDS             <1..181
                     /locus_tag="VF991_07520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556326.1"
                     /translation="VCTAVEYFGAVRRHVFERSDGEVLKYDQFGAHAARIVPGQRTVL
                     GWQAEASVLHAGVGG"
     gene            178..1047
                     /locus_tag="VF991_07525"
     CDS             178..1047
                     /locus_tag="VF991_07525"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556327.1"
                     /translation="MSTIRIRSPASYWLAVPAAAWMLGVVVVPIVLLVWVSFWGGRAF
                     STASPLTFDNYARFFANQTYIKLAGTTVFHTATLMVVTGVLGYCIAYFLVMKVKSPGW
                     RLALFMAFIIPFWTSTLIRAIAWVPFLGVNGVINQTLMAIGATQSPIEAFLYSKTGIT
                     MAQVSLYTMMAAGPVVYMLNAVAPQWREAAMTLKATPFTVFWRIVFPLTLPGVVIGQV
                     LVFLNVMSDFATVATIGGNKHALLSNLVLLFYESSQIRAASVVAVLLMICMLVGVVVA
                     LRVVDVRRLGAER"
     gene            1073..1903
                     /locus_tag="VF991_07530"
     CDS             1073..1903
                     /locus_tag="VF991_07530"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9556328.1"
                     /translation="MIGWKGRLNLTGWILGTLTVIFLAYQWLPIFTLGLLSFSGPTGG
                     TTFPMNGASFHWYQELWRATVMNDFKPPLLRSAALALACSATTIVLSVMAAQAMRGQF
                     RGNGWFFYLMLLGIMAPGILVGFGFAILMRLMDVELSWDTTTFLVQVSWTLPFGFLTM
                     LAVFNRFDKRVEEAALTLGASRLSTFRRITLPLVLPGVIGAGLFGFSLSYDEYARSMF
                     TTGPDATLPLAVMAQLDRQLTPEIYAVGTTTTLFSLFAVTLCTFAFWAMRRSTSLRKS
                     "
     gene            1917..3059
                     /locus_tag="VF991_07535"
     CDS             1917..3059
                     /locus_tag="VF991_07535"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PotD/PotF family extracellular solute-binding
                     protein"
                     /protein_id="HEX9556329.1"
                     /translation="MLITRRTLIAAAGASTLAAPAIAQTKQINLAGASYDMREAILGE
                     FTKRTGITPRPFVNPSTQVRIDRLRTAPVDIVLTDAPFAAYANSEKLLQPIDISKLPN
                     WSLMHPLLKDGRATPTAPLGYGANPGRMMYLDEARTKVSFAPMFFQMDSIGYNASKIP
                     AENNTLSWGELFNPKWRGKVAMFGIDWLGMLNAAMGMRALGLFNPVDISSMSEKEVDT
                     VVAFLKEKKKEGHFRAMWKAYGELVNLMASEEVWIADAWWPVIVEVSSKGIPVHYAVA
                     KEGYRAWCNGYGISASSKNIDACYEWLNYWMEGYPGARQSEIGYFSTVNNYEKYLDPK
                     LVKEVYGGEGRDGGSLADRAQRVFVWNTRPKNLEYYTEKWNEFLAA"
BASE COUNT          511 a         1045 c          996 g          604 t
ORIGIN      
        1 ggtgtgcacg gcggtggaat atttcggtgc cgttcgccga cacgtcttcg agcgatcgga
       61 cggcgaggtc ctgaaatacg atcagttcgg cgcccacgcc gcgcggatcg tgccgggcca
      121 gcggaccgtg ctgggctggc aggcggaagc ctcggtcctg catgccgggg tcggcggatg
      181 agcaccatcc gtatccgctc gcccgccagc tactggctgg ccgttccggc ggcggcctgg
      241 atgctgggcg tcgtcgtcgt gccgatcgtg ctgctggtct gggtctcgtt ctggggcggc
      301 cgggccttct cgacggcaag cccgctcacc ttcgacaact acgcgcgctt tttcgccaac
      361 cagacctaca tcaagctggc ggggaccacg gtgttccata ccgccacgct gatggtcgtc
      421 accggcgtgc tgggctactg catcgcctat ttcctggtga tgaaggtgaa gagtccgggc
      481 tggcggctgg cgctgttcat ggccttcatc atcccgttct ggaccagcac gctgatccgc
      541 gccatcgcct gggtgccgtt cctcggcgtc aacggcgtca tcaaccagac cctgatggcg
      601 atcggtgcca cccagtcgcc aatcgaggcg tttctctatt cgaagaccgg catcaccatg
      661 gcgcaggtgt cgctctatac gatgatggcc gccgggcctg tcgtgtacat gctgaacgct
      721 gtcgccccgc agtggcgcga agcggcgatg accttgaagg ccacgccctt cacggtgttc
      781 tggcgcatcg tctttccgct caccttgccc ggcgtggtga tcggccaggt gctggtgttc
      841 ctcaacgtca tgtccgactt cgccaccgtg gccacgatcg gcggcaacaa gcacgcgctg
      901 ctctccaacc ttgtgctgct gttctacgaa agctcgcaga ttcgcgcggc ctcggtggtg
      961 gccgtactgc tgatgatctg catgctggtg ggcgtcgtcg tggcgctgcg cgtcgtcgac
     1021 gtgcgccgcc tgggagcgga acgatgaggc ccgcaacgat gaggttggcg cgatgatcgg
     1081 ctggaagggc cgcctcaacc tcaccggctg gatcctcggc accctgacgg tgatcttcct
     1141 cgcctatcaa tggctgccga tcttcaccct gggcctgctg tcgttcagcg gcccgaccgg
     1201 cggcacgacc ttccccatga acggcgcgtc gttccattgg taccaggagc tgtggcgcgc
     1261 cacggtcatg aacgacttca agccgccgct cttacgctcg gcggcgctgg cgctcgcctg
     1321 ttcggccacc accatcgtgc tgtcggtgat ggcggcgcag gccatgcgcg gccagttccg
     1381 cggcaacggc tggttcttct acctcatgct gcttggtatc atggcgcccg gcatcctggt
     1441 gggcttcggc ttcgccatcc tgatgcggct gatggatgtc gagctgtcgt gggacaccac
     1501 gaccttcctg gtccaggtct cgtggacctt gccgttcgga ttcttgacca tgctggcggt
     1561 gttcaaccgc ttcgacaagc gggtcgagga ggcggcgctg accttgggcg cctcgcggct
     1621 cagcaccttc cggcgcatca ccctgccgct cgttttgccc ggcgtgatcg gcgccggcct
     1681 gttcggcttc tcgctgtcct acgacgaata cgcccgcagc atgttcacca ccggccccga
     1741 cgccaccctg ccgctcgccg tcatggcgca gctcgaccgc cagctcacgc cggaaatcta
     1801 tgccgtcggc accacgacca ccctgttttc cctgttcgcc gtcacgctct gcaccttcgc
     1861 cttctgggcg atgcggcgat cgacgtctct ccgcaaatcc tgaaggaggt aggaccatgc
     1921 tgatcacacg ccgtaccctg attgccgccg ccggcgcatc gacgctggcg gcacccgcca
     1981 ttgcccagac caaacagatc aacctcgcag gagcgagcta cgatatgcgc gaggcgatcc
     2041 tgggcgagtt caccaagcgc accggcatca cgcccaggcc cttcgtgaac ccctcgacgc
     2101 aggtccgcat cgatcgtctg cgcaccgcgc cggtcgacat cgtgctgacc gacgcgccgt
     2161 ttgccgccta cgccaacagc gagaagctgc tgcagccgat cgacatctcg aagctgccca
     2221 actggtcgct gatgcatccg ctcctgaagg atggccgcgc gacgccgacc gcgccgctgg
     2281 gctacggcgc caatccgggc cgcatgatgt atctcgacga ggcgcgcacc aaggtctcgt
     2341 tcgcgccgat gttcttccag atggactcga tcggctacaa cgcctcgaag atcccggccg
     2401 agaacaacac cttgtcctgg ggcgagctgt ttaatcccaa gtggcgcggc aaggtggcga
     2461 tgttcggcat cgattggctg ggcatgctga acgccgccat gggcatgcgc gcgctcggcc
     2521 tgttcaaccc ggtcgacatc agcagcatga gcgaaaagga ggtcgacacc gtggttgcct
     2581 tcctgaagga gaagaagaag gagggccatt tccgcgccat gtggaaggcc tatggcgagc
     2641 tggtgaacct gatggcctcg gaagaggtct ggatcgccga tgcctggtgg ccggtgatcg
     2701 tcgaggtctc gagcaagggc attccagtcc actacgccgt cgccaaggaa ggctatcgcg
     2761 cctggtgcaa cggctacggc atctccgcca gcagcaagaa catcgacgcc tgctacgaat
     2821 ggctgaacta ctggatggaa ggctatcccg gcgcgcggca gtcggagatc ggctatttct
     2881 cgacggtcaa caactacgag aaatacctcg atcccaagct ggtgaaggaa gtctatggcg
     2941 gcgagggccg cgacggcggc tcgctggccg atcgcgccca gcgcgtcttc gtctggaaca
     3001 cgcggcccaa gaacctcgag tactataccg agaagtggaa cgagtttctg gcggcctaag
     3061 cgcattcata tgcgctggcg ggcggcagcg cttgtaatca agcgcgagag cccgcacggt
     3121 gcagaaaggg tctcggtggg gggccagctc cgctcc
//
LOCUS       DASWGA010000311         2850 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1423303, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000311 DASWGA010000000
VERSION     DASWGA010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2850
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1423303"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1309)
                     /locus_tag="VF991_07540"
     CDS             complement(<1..1309)
                     /locus_tag="VF991_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEX9556330.1"
                     /translation="MGLPTGFLQIERKDRPYEKVEKRLKTWKEFVLPLPAAEVSRQGA
                     RCMDCGIPFCHNGCPVNNLIPDWNELVRRDRWRDALEVLHSTNNFPEFTGRICPAPCE
                     AACTLNIDDNPVTIKSIECAIVDRGWEEGWIAPQPPARKTGKQVAVVGSGPAGMACAQ
                     QLGRTGHAVTLFEKADRIGGLLRYGIPDFKMEKHLIDRRMRQMEAEGVEFRAGVEVGA
                     ALSLKSLLEGYDAVALTGGAEWPRDLAVPGRELSGIHFAMDFLVQQNKRIAGDDEARA
                     APDGTLTAHGKHVIVIGGGDTGSDCVGTSNRQGAASVTQLEVMPQPPDKENKALVWPD
                     WPLKMRTSSSHEEGVERDFAVLTKRAVGQDGQITALECARIDWVKGDDGRLAMQEVEG
                     SRFELKADLVLLAMGFLGPCKPGMVEQAGLALDPRGNVLANVTD"
     gene            complement(1315..>2850)
                     /locus_tag="VF991_07545"
     CDS             complement(1315..>2850)
                     /locus_tag="VF991_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HEX9556331.1"
                     /translation="LVSEVGVGTVAAGVSKARSDHVTIAGYEGGTGASPLTSIKHAGS
                     PWEIGLAETHQTLVANRLRGRIAVQVDGGLRTGRDVAIGALLGADEFGFATAPLIAAG
                     CIMMRKCHLNTCPVGVATQDPVLRKRFTGQPEHIINYFFFVAEELRAIMAQMGFRTLN
                     DMIGRVDRLDMRAAVDHWKAGGVDLSRLLYLAPSKPGVAIWNSERQDHGLDKALDHKL
                     IEAAQPALDKGEPVLIELPIGNVNRTVGAMLSGEVARRTGHTGLPEDTISVKFTGTAG
                     QSFGAFLAHGVSLDLSGDANDYVGKGLSGGRVVVRQPKGATRDPLENIIVGNTVLYGA
                     IGGEAYFEGVAGERFAVRNSGAVAVVEGTGDHGCEYMTGGVVVVLGDTGRNFAAGMSG
                     GIAYVYDPKARFGDLCNPAMVELEPVVPPSSDKDDPARPHQRASSADDSGMGDMLRFD
                     AERLRILIERHHLHTGSARARELLEDWDNALKSFIKVMPKDYKRALLQARDRAAAKAV
                     AAE"
BASE COUNT          434 a          966 c          974 g          476 t
ORIGIN      
        1 agtccgtcac gttggccaaa acattgccgc gcggatcgag cgccaagcca gcctgctcga
       61 ccataccggg cttgcatggt cccaggaagc ccatggccag tagcaccagg tcggccttga
      121 gctcgaaccg gctgccctcg acttcctgca tcgccaggcg gccatcgtcg cccttcaccc
      181 agtcgatgcg tgcacattcc agtgcggtga tttgcccatc ctggccgacg gcgcgcttgg
      241 tcagcacggc aaagtcgcgc tcgacacctt cttcatggga ggatgaagtg cgcatcttca
      301 agggccagtc cggccagacc agcgccttgt tctccttgtc aggcggctgc ggcatgacct
      361 cgagctgggt caccgacgcc gcgccctggc ggttcgaggt gccgacgcag tccgagccgg
      421 tgtcgccgcc gccgatcacg atgacatgct tgccgtgcgc cgtgagcgtg ccgtcaggcg
      481 cggcgcgcgc ctcgtcgtcg ccggcgatac gcttgttctg ctgcaccagg aaatccatgg
      541 cgaaatggat gcctgaaagc tcgcggcccg gcacggcgag gtcgcgcggc cactccgcgc
      601 cgccggtcag cgccaccgcg tcgtagccct cgagcagcga cttgagggag agcgcggcgc
      661 cgacctcgac gccggcgcgg aactcgacgc cttcggcctc catctggcgc atgcgtcggt
      721 cgatcaggtg cttctccatc ttgaagtcgg gaatgccgta gcgcagcagc ccgccgatgc
      781 ggtcggcctt ttcgaacagc gtcacggcat gaccggtgcg gccgagctgc tgggcgcacg
      841 ccatgccggc cgggccggag ccgacgacgg cgacctgttt gccggtcttg cgggccggcg
      901 gctgcggcgc gatccagccc tcctcccagc cgcgatcgac gatcgcgcac tcgatggatt
      961 tgatggtgac cggattgtcg tcgatgttga gcgtgcacgc cgcctcgcag ggtgccggac
     1021 aaatacggcc ggtgaattcc gggaagttgt tggtcgagtg cagcacctcg agggcgtcgc
     1081 gccagcggtc gcggcgcacc agctcgttcc agtccgggat cagattgttg accggacagc
     1141 cgttgtggca gaacgggatg ccgcaatcca tgcagcgcgc gccctgccgg gaaacctcgg
     1201 cagccggcag cggcagcacg aattccttcc aggtcttcag gcgtttctcg accttctcgt
     1261 agggccgatc cttgcgctcg atttgcagaa agccggtggg aagccccata cgccctactc
     1321 cgccgcgacg gccttggccg cggcgcggtc gcgtgcctgc aagagcgcgc gcttgtaatc
     1381 cttgggcatc accttgatga agcttttcag cgcgttgtcc cagtcctcga ggagctcgcg
     1441 cgctcgggcg ctgccggtgt gcagatggtg gcgttcgatc aggatgcgca ggcgctcggc
     1501 gtcgaagcgc agcatgtcgc ccatgccgct gtcgtcggcg cttgaggccc gctgatgcgg
     1561 ccgcgccggg tcgtccttgt cggatgacgg cggaacgacc ggctcgagct cgaccatcgc
     1621 ggggttgcac aggtcgccga agcgcgcctt ggggtcatag acgtaggcga tgccgcccga
     1681 catgccggcc gcgaagttgc ggccggtgtc gcccagcacg accacgacgc cgccggtcat
     1741 gtactcgcag ccgtggtcgc cggtaccctc gaccaccgcg accgcgcccg agttgcgcac
     1801 ggcgaagcgt tcgcccgcca cgccctcgaa ataggcctca ccgccgatcg cgccgtagag
     1861 cacggtgttg ccgacaatga tgttctccag cggatcgcgc gtggcgccct tgggctggcg
     1921 cacgacgacg cggccgcccg acaggccctt gccgacatag tcgttggcgt cgcccgacag
     1981 gtcgagggac acgccgtgcg ccaggaaggc gccgaagctc tggccggcgg tgccggtgaa
     2041 cttcaccgag atggtgtcct cgggcaggcc ggtatggccg gtgcgcctgg cgacctcgcc
     2101 cgacagcatg gcgcccaccg tgcggttgac gttgccgatc ggcaattcga tcagaaccgg
     2161 ctcacccttg tccagggccg gctgcgcggc ctcgatcagc ttgtggtcga gcgccttgtc
     2221 gagcccgtga tcctggcgtt cgctgttcca gatggcgacg cccggttttg acggcgcgag
     2281 atacagcagc cgcgagaggt cgacaccacc cgccttccag tggtcgacgg cggcacgcat
     2341 gtcgagccgg tcgacccggc cgatcatgtc gttcagggtg cggaagccca tctgcgccat
     2401 gatcgcgcgc agctcttcgg cgacgaagaa gaaatagttg atgatgtgct cgggctggcc
     2461 ggtgaagcgc ttacgcagca ccgggtcctg cgtcgccacg ccgaccgggc aggtattgag
     2521 atggcacttg cgcatcatga tgcagccggc ggcgatcagg ggcgcggtcg cgaagccgaa
     2581 ctcgtcggcg cccagaagcg cgccgatggc gacgtcgcgg ccggtgcgca ggccgccatc
     2641 gacctgcacg gcgatgcggc cgcgcaaccg gttcgcgacc agggtctgat gcgtttcggc
     2701 aaggccgatc tcccagggtg atccggcatg cttgattgag gtgagcggcg atgcgccggt
     2761 gccgccctcg tagccggcaa tggtgacgtg atcggaacgc gccttggaca cgccggccgc
     2821 gaccgtgccg acgccgacct cggaaacgag
//
LOCUS       DASWGA010000312         4332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_288209, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000312 DASWGA010000000
VERSION     DASWGA010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4332
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288209"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1863
                     /locus_tag="VF991_07550"
     CDS             <1..1863
                     /locus_tag="VF991_07550"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9556332.1"
                     /translation="KNNIVFDWELGERAKTETAFAKADRVVKLQIVNNRLIVNSMEPR
                     GAICTYDATDDRSTLWVSSQGVHMIRPVVADLILKIGSPKLRVRTGDVGGGFGMKIFV
                     HPEYPMVVWASRALKRTVKWIPDRQEAFQSDVQGRDHVSIAEMALDKDAKFIGCRITT
                     YAALGAYLNHFSAFIPTLAGSSMLAGLYQTPAIYVNVKGVLTNTVPTDAYRGAGRPEA
                     AYLLERFVDHIARESGLAPDEIRARNFVKPGQIPWKTALGDTYDSGDFEALMRKGMEK
                     ADWTGFANRRAQSESRGKWRGIGMATYVEKCGGGGTPETAIAKFNDDASITLYLGNQT
                     SGQGHETAIRQIASARLGIDAERIAIVQGDSDVTPEGMTGGSRMVSVAGVATMGVADK
                     IIAKGKLVAASVMEASAADIDYADGAFKIVGTDRTMSLFDVAKAAKDAKHAPAGEKPG
                     LDDEFTRMPEVDTFPNGCHICELEIDPDTGTLEILNYSVMDDFGTALNPLLLQGQVHG
                     GVGQGVGQALTEKTVYDKDSGQLLSGSFMDYALPRADIVPPVKFDMHNSLCTTNPLGV
                     KGAGEAGAIGAPPAVINAIVSAIHPHTGIKHVDMPVTAASLWAAIDAHRAKKVA"
     gene            1870..2127
                     /locus_tag="VF991_07555"
     CDS             1870..2127
                     /locus_tag="VF991_07555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556333.1"
                     /translation="MTNDRKDLAAALGHSLKAIDDDYKEEMRELREIFEEARKEAEKN
                     KPDRVKLKALLADANEMARTFATLDPAWQAVQRVAKMFGLL"
     gene            2163..2702
                     /locus_tag="VF991_07560"
     CDS             2163..2702
                     /locus_tag="VF991_07560"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9556334.1"
                     /translation="MPDLVALWEAHCRHEFETRDVDATMATMVARPYVNHVPTMTGGV
                     GHDQLKRFYKYHFIGGNPPDTELKPVSRTVGADQIVDELLFCFTHTSEIDWMLPGIAP
                     TGKRVEVPLVAIVRFDGDKVAHEHIYWDQASVLVQVGLIDPKGLPVAGIETARKVADN
                     ALPSNRLMTRWATSAGKPI"
     gene            2845..4047
                     /locus_tag="VF991_07565"
     CDS             2845..4047
                     /locus_tag="VF991_07565"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9556335.1"
                     /translation="MTEQAFSTTNPSTVAVKRTGRAGLVDRILTRFTQSPTPFEIVFP
                     DGYRRSFGDGPPSFTLTLRNRQALRAFASMDEGRVGDAYVAGHVDIEGDMLRPFEVRR
                     SMGDRHYLVTLWRFLQPLLFGQVRTNQKAIADHYDINSDFFLSFLDREHPMYTQGVYS
                     GPDDTLSAATLRKFDYCFEKLNLKPGDRILEIGPGWGAWFIYASQRGVKCTGLTISKE
                     SKEYLQRRAAELGQDWSVIHCDFLAYETTDKYDAIVIMGVIEHLPQYGAVVAKFASLL
                     KPGGRIFLDGSACTKKYELSSFMVKYIYGGNHSFLVLHDFLTQMARTPLRVHEMHDDR
                     FSYFLTFQQWARNFDANRQAVIDRFGDFNFRRFRLYLWGAAYEFLSGSLDCYRMIIEY
                     PVFPGDES"
     gene            4090..>4332
                     /locus_tag="VF991_07570"
     CDS             4090..>4332
                     /locus_tag="VF991_07570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018099271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556336.1"
                     /translation="MKSMRPTLYGSRHAVSAGHYLAAAAGFSILEAGGNAIDAGCAMG
                     IALAVLHPDEVNVAGVAPIMIRTGRHGEKGGKVVTIA"
BASE COUNT          834 a         1452 c         1357 g          689 t
ORIGIN      
        1 aagaacaaca tcgtcttcga ctgggagctg ggcgagcgcg ccaagaccga gacggccttc
       61 gccaaggccg accgcgtggt caagctgcag atcgtcaaca accggctgat cgtcaactcg
      121 atggagccgc gcggcgcgat ctgcacctac gacgccacgg acgaccgctc gaccctgtgg
      181 gtgtcctcgc agggcgtcca catgatccgc ccggtggtgg ccgacctgat cctgaagatc
      241 ggctcgccca agcttcgggt gcgtaccggc gacgtcggcg gcggcttcgg catgaagatc
      301 ttcgtccatc ccgaatatcc catggtggtg tgggcgtcgc gggcgctgaa gcgcacggtg
      361 aagtggatcc ccgatcgcca ggaggccttc cagtccgacg tgcagggccg cgaccatgtc
      421 tcgatcgccg agatggcgct cgacaaggac gcgaagttca tcggctgccg catcacgacc
      481 tatgccgcgc tgggcgccta tctcaatcac ttcagcgcct tcatcccgac gctcgccgga
      541 tcgtcgatgc tggccggcct ctaccagacg ccggcgatct acgtgaacgt caagggcgtg
      601 ctgaccaaca cggtgccgac cgacgcctat cgcggcgcgg gacggcccga ggcggcgtac
      661 ctgctggagc gcttcgtcga ccacatcgcg cgcgagagtg ggctggcgcc cgacgagatc
      721 cgcgcccgca acttcgtgaa gcccggccag atcccgtgga agacggcgct cggcgacacc
      781 tatgactcgg gcgacttcga ggcgctcatg cgcaagggca tggagaaggc cgactggacg
      841 ggatttgcca accgccgagc ccagtcggag agccggggca agtggcgcgg catcggcatg
      901 gcgacctatg tcgagaaatg cggcggcggc ggcacgcccg agacggccat cgccaaattc
      961 aacgacgatg cctcgatcac gctctatctc ggcaaccaga ccagcggcca gggccacgag
     1021 acggcaatcc gccagatcgc ctcggcgcgg ctcggcatcg acgccgagcg catcgccatc
     1081 gtgcagggcg attcggacgt cacgcccgag ggcatgaccg gcggcagccg catggtctcg
     1141 gtggccggcg tggcgaccat gggcgtcgcc gacaagatca tcgccaaggg caagctggtg
     1201 gcggcaagcg tgatggaagc gagcgcggcc gacatcgact acgccgacgg cgccttcaag
     1261 atcgtcggca ccgaccgcac gatgagcctg ttcgacgtcg ccaaggcggc caaggatgcc
     1321 aagcacgcgc cggcgggcga gaagcccggt ttggacgacg agttcacgcg catgcccgaa
     1381 gtcgacacct ttcccaacgg ctgccacatc tgcgagctcg agatcgatcc cgacaccggc
     1441 accttggaaa tcctgaacta cagcgtcatg gacgatttcg gcaccgccct aaacccgctg
     1501 ctgctgcagg gtcaggtcca tggcggcgtc ggccagggcg ttggccaggc gctgaccgag
     1561 aagacggttt acgacaagga ctcgggccag cttctgagcg gcagcttcat ggactacgcc
     1621 ctgccgcgcg ccgacatcgt gccgccggtg aaattcgaca tgcacaacag cctgtgcacg
     1681 accaatccgc tgggcgtgaa gggcgcgggc gaggccggcg ccatcggcgc gccgccggcg
     1741 gtgatcaacg ccatcgtcag cgccatccat ccccataccg gcatcaagca tgtcgacatg
     1801 ccagtgacgg cagcgtctct ttgggcggcg atcgatgccc atcgcgcgaa gaaggtggcg
     1861 tagatggcca tgaccaacga tcggaaggat ctcgcggccg cgctaggcca ttcgctgaag
     1921 gcgatcgacg acgactacaa ggaggagatg cgcgaactgc gcgagatctt cgaagaggcc
     1981 agaaaagaag ccgagaagaa caagcccgac cgggtgaagc tgaaagccct gctggccgac
     2041 gccaacgaaa tggcgcggac cttcgccacc ctcgatccgg cctggcaggc cgttcaacgc
     2101 gtggccaaga tgttcggtct gctgtagcgc caccaaccca tcgtcgcagg aaccgtatgc
     2161 ccatgcccga tctcgtcgcc ctctgggaag cccattgccg ccacgaattc gagacccgcg
     2221 acgtcgacgc cacgatggcg accatggtgg cgcggcctta cgtcaaccac gtgccgacca
     2281 tgaccggcgg ggtcggccac gatcagctga aacgcttcta caaataccac ttcatcggcg
     2341 gcaatccgcc cgataccgag ctcaagccgg tcagccgcac cgtcggcgcc gaccagatcg
     2401 tcgacgagtt gctgttctgc ttcacccaca ccagcgagat cgactggatg ctgccgggca
     2461 tcgcgccgac cggaaaacgg gtcgaggtcc cgctggtcgc catcgtgcgc ttcgacggcg
     2521 acaaggtggc gcacgagcac atctactggg accaggcgtc ggtgctggtc caggtcggac
     2581 tgatcgatcc gaagggcctg ccggtggcgg gcatcgagac cgcgcgcaag gtcgccgaca
     2641 atgcgctgcc cagcaaccgg ctgatgacgc gctgggccac gagcgcgggc aagccgatct
     2701 aggagtaacc tccgcgctgc atggcgcctt cacatgcgcc tgacagatca ggcctggagg
     2761 cccgcgctct tgaggacaac tccaacgcgc cgcctcgcag tcctgcttga ccaaacgcga
     2821 tgaggcggca accatggcga cggcatgact gaacaggctt tctccaccac caacccgtca
     2881 accgttgcgg tgaagcgtac cggccgggcg ggactggtcg accgcatcct gacgcggttc
     2941 acgcaatcgc caacgccctt cgaaatcgtt tttccggacg gctatcgcag aagtttcggc
     3001 gacggaccgc cgagcttcac cttgaccttg cgcaaccgcc aggccctgcg cgccttcgcc
     3061 agcatggacg aaggacgggt cggcgacgcc tacgtcgcgg gccatgtcga tatcgaaggc
     3121 gacatgctgc ggcccttcga ggtccgccga tcgatgggcg atcggcacta cctcgtcacc
     3181 ctatggcgct tcctgcaacc cctgctgttc ggccaggtgc ggacgaatca aaaggcgata
     3241 gccgatcact acgacatcaa ctcggatttc ttcctgagtt ttctcgaccg cgaacacccg
     3301 atgtacacgc aaggcgtcta cagcgggccc gacgacacgc tgagcgccgc gacgctcagg
     3361 aagttcgact attgcttcga gaaactgaac ttgaaacccg gcgaccgtat cctcgagatc
     3421 ggtccgggct ggggagcctg gttcatctat gcctcgcaac gcggcgtcaa gtgcaccggc
     3481 ctgaccatct ccaaggagtc gaaggagtat ctccagcgcc gcgcggccga gctgggacag
     3541 gactggtcgg tcatccactg cgacttcctg gcctacgaga ccacggacaa atacgacgcg
     3601 atcgtgatca tgggggtgat cgagcatctg ccccagtacg gcgccgtggt cgccaagttc
     3661 gcgtcgctcc tcaagccggg tggccgcatc ttcctcgacg gcagcgcctg caccaagaag
     3721 tacgagctgt cgtctttcat ggtcaaatac atctacggcg gcaatcattc cttcctggtc
     3781 ctgcacgact ttctcaccca aatggcccgc actcctcttc gcgtgcacga aatgcacgac
     3841 gatcgcttct cctatttcct gacgttccag cagtgggcga ggaacttcga tgcaaatcgg
     3901 caagcggtga tcgaccgctt cggggacttc aactttcgcc ggttccggct ctacctgtgg
     3961 ggcgcggcct acgagttcct gagcggcagc ctcgattgct atcgcatgat catcgaatac
     4021 ccggtctttc cgggcgacga gagctgagca aagacgaccg ccgccgtcgc cagtcgaagc
     4081 gagctgccca tgaaatccat gcgcccgacg ctctacggca gccggcacgc cgtttcggcc
     4141 ggccactatc tcgccgccgc cgccggcttt tccatcctcg aggcgggcgg caatgcgatc
     4201 gatgcgggct gcgcgatggg catcgcgctg gccgtcctgc accccgatga ggtgaacgtc
     4261 gcgggcgtgg cgccgatcat gatccgcacc ggccgccatg gagagaaagg cggcaaggtc
     4321 gtcaccatcg cc
//
LOCUS       DASWGA010000313         6367 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1934961, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000313 DASWGA010000000
VERSION     DASWGA010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6367
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1934961"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VF991_07575"
     CDS             complement(<1..204)
                     /locus_tag="VF991_07575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate cyclase"
                     /protein_id="HEX9556337.1"
                     /translation="MASEQVERKLATILAVGIAGYSRPMAADQEGTVARLKSLCRELV
                     DPKIKEYRGRIIKKSLRDGVLVEF"
     gene            complement(721..1461)
                     /locus_tag="VF991_07580"
     CDS             complement(721..1461)
                     /locus_tag="VF991_07580"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018517641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase family protein"
                     /protein_id="HEX9556338.1"
                     /translation="MTNEPRLVDKVALVFGGSRGIGAAIVKQLASDGASVALTYAKSP
                     DKAAETARAAEALGVSAIMIKADSADAEAVTDAVAQTVARFGRLDILVVNAGILIRGT
                     VDTFVLEDFDLMLATNVRGVFVAIQASAPHLTDGGRIITIGSNTAVRTAFPGASVYSM
                     TKGAIASLVRGVAIDLAPRGITVNNIQPGPTATDMTAAYGEMVKPLVPLGRMGEPEEI
                     AGLVAYLASARAGFITGSSLTIDGGYVA"
     gene            complement(1530..2066)
                     /locus_tag="VF991_07585"
     CDS             complement(1530..2066)
                     /locus_tag="VF991_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019565669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9556339.1"
                     /translation="MSVFWSKGYAATSTDDLLQAMQIGRQSMYDTFGDKRRLYVEALE
                     RYQQESVAGHIKRLRSVASPLAGIEALVVGVISSDRTTREKGCMGVGAICEFGTADPE
                     LADLRVKSGSMLHKALIERLQDAQAVGEIGETVDIERAARFVETTMLGLQVAAKAGES
                     ARALRDMAAFAISGLRSR"
     gene            complement(2807..4054)
                     /locus_tag="VF991_07590"
     CDS             complement(2807..4054)
                     /locus_tag="VF991_07590"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9556340.1"
                     /translation="MSNSKAPRTIAAGAIGNALEWYDFAIYGYFAATIGRVFFPHEDK
                     VAQVLAAFGIFAVGFLMRPVGGALIGYIGDRFGRRTALTFSVAAMAIPTFLVGVLPGY
                     QTLGVAAPILLTLLRMIQGLSVGGEYTTSIVFMVEQARPDRRGLIGATAGCGAVGGIL
                     AGSATGAVLAEAMSAEVLEAWGWRIPFLIGLLVGLAGFALRRGIHEDAIHKKAERSPL
                     RDTLRHHGPLLLRLAALSVFNSVGFYLMFVYIVSWLQLADGIAPARALEINTVSMAIL
                     LPVMVAMGWLSDRIGRRPILLGATALGLIAAWPLFWLMHQADPAFVLLGQLGFVLAVG
                     AFVGTQPTIMVEAVPASVRCTTIALGYNVTLGVVGGLSPLVATWLVERTANDYSPAFM
                     IMAAAAVSFAALLTFKETFRAPV"
     gene            complement(4055..5431)
                     /gene="clcA"
                     /locus_tag="VF991_07595"
     CDS             complement(4055..5431)
                     /gene="clcA"
                     /locus_tag="VF991_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="H(+)/Cl(-) exchange transporter ClcA"
                     /protein_id="HEX9556341.1"
                     /translation="MSPGDRPTRPSISDGVFYCIAGACGFATGIVGAAFHLTVDTLLR
                     WPTWLVAWLGPGVLTIAVASVIAAVGVVLAFLLTQRIAPEAAGSGVPEVEGALEGLRE
                     VRWRQVLPVKFVGGVLGLSSGLVAGREGPTIHMGAAIGAFLAERLRLGQMDLHTLLAA
                     GAAAGLAAAFNAPLAAVLFVIEETRKQFRYTFRSYVAVIAASAASAFGMELVGGIAPP
                     LRLDTQAVPLLLLPAFMVLGAALGVLGVLFNRCLVLALDWRAATFKRAPFAFALIVGA
                     AVGALAIVLPLAVGGGETLIPSMPGANLPILTLLLIAVVRFIGTMASYPVGVPAGIFS
                     PMLTFATTVGLIAGALIQAGLAWAALPVPPMLGAAFAVAAMGGLFSGTIRAPLVGVVL
                     AVELTGGYALILPLIVTCVTAHVVAQRLHGRPIYEVLLERSLRLAGQVPRTPSTDVSS
                     PVGIDEAH"
     gene            complement(5573..5863)
                     /locus_tag="VF991_07600"
     CDS             complement(5573..5863)
                     /locus_tag="VF991_07600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556342.1"
                     /translation="MPKRFLALLVLPFVLSGCAAVLVGGLFYNSAKTYEQKQKFTSDF
                     QKQNVEREKAGLAPLDWCSEAYKFDKVWASEGTGCADRIRRYEAGDRNALTV"
     gene            complement(6089..>6367)
                     /locus_tag="VF991_07605"
     CDS             complement(6089..>6367)
                     /locus_tag="VF991_07605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556343.1"
                     /translation="RLDLMKRLLLPFLAAMLALPSTTDAQDSDMAYCAALSVLYRRYV
                     QNSPGRQYDAEAAVAQDDCQKGKTAAAIPVLERKLRESGFTLPQRPTQ"
BASE COUNT         1201 a         2037 c         2048 g         1081 t
ORIGIN      
        1 aaactcgacc agcacgccgt cgcggaggga ttttttgatg atgcggccgc gatattcctt
       61 gatcttcggg tcgaccagtt cgcggcaaag cgacttgagt cgcgccaccg taccttcctg
      121 atccgccgcc attggccgcg aatagccagc gatccccacc gcgagaatgg tagcgagttt
      181 gcgctcgacc tgctccgatg ccacgtcaac acccctccag ggattggaag ccaatcatat
      241 cattcccagc ttgtgagcgg ggttctgccc agattatgcc accagaggtc gccttctggc
      301 ctcttgggac gtccagcaat gccccgccta tgacctcttg cgagggcaag gcagacagcg
      361 attgccgagg ggtaagggtg cctaaggcgc gagataggtc cttggttgtg gctcatcggc
      421 tcagtgcaat agcaccaacc cagtcttttc acgaccattg cactgagttg gctcacttgc
      481 cgcctgatcc ctcgcgaagc aggctgcgga tatcgtataa tgtgcattct gcatccggcg
      541 cgtcgggcga ctgtgagggt tggcaatcga caggttggtt ctggctggtc ccggagcgcc
      601 aaacgcctac aaccagtctg tgtgctgagc ttgcccagtg tctgctttgc ccctgatagc
      661 gacagaacag cggacattcc gggaggtccg gtttgtgcca tcaaaagcgg actcagcacg
      721 tcacgcgaca tatccgccat cgatcgtcag gctggagccg gtgatgaagc cggctctggc
      781 gctggcgaga taggcgacca acccggcgat ctcttcgggc tcgcccatgc gtccgagtgg
      841 cacgaggggt ttcaccatct cgccgtaggc tgctgtcatg tcggtggctg tggggccggg
      901 ctggatgttg tttacggtaa tcccgcgagg ggcgagatca atcgccactc cgcgaaccaa
      961 ggacgcaatg gcgcccttgg tcatcgaata gacgctggcc ccaggaaatg cggtcctgac
     1021 ggcggtgttg ctgccgatgg ttataattct tccgccgtcc gtgagatggg gggcggacgc
     1081 ctggatcgcg acgaagacgc cgcgcacatt cgtcgccagc ataaggtcga agtcttcaag
     1141 gacaaacgtg tccactgtgc cacgtatcaa aataccggcg ttgacgacca gaatgtcgag
     1201 gcggccgaag cgtgcaactg tctgcgccac tgcgtccgtc accgcctccg catcggcgct
     1261 gtcagctttg atcatgatcg ccgaaacacc caacgcctct gctgcgcggg cggtctcggc
     1321 cgccttatcc ggcgatttgg cataagtcag agcgaccgac gcgccgtccg aggcaagttg
     1381 tttcacgatc gccgccccaa tacccctgga gccgccgaat acaagcgcga ctttatccac
     1441 gagccgaggt tcgttagtca tcgttctctc cattattgat cgattggtcc agaataaatc
     1501 acgccagtat tatgtgtgtc tcgtacgact taccggcttc tcaagcctga gatcgcgaag
     1561 gcggccatgt cgcgaagagc gcgggcgctt tcgccggcct ttgccgcgac ctgcagcccc
     1621 aacatggtcg tctccacgaa gcgggctgca cgctcgatgt cgacagtctc tccgatctca
     1681 ccgacagcct gggcgtcttg caatcgttca atcagcgcct tgtgcagcat gctgccgctt
     1741 ttgacgcgaa gatcggccag ctcgggatcc gcggttccga attcgcagat ggcaccgaca
     1801 cccatacagc ccttttcgcg cgtggtcctg tccgaggaaa tcacgccgac gaccagagct
     1861 tcgattccgg cgaggggtga cgcgactgat cgcagccgct taatgtgccc ggcaacgctc
     1921 tcctgctgat acctctcgag cgcttcgaca tagaggcgcc gtttgtcgcc gaaagtgtcg
     1981 tacatgcttt gcctgccgat ttgcattgcc tgcagcaggt cgtcggtcga cgttgcggcg
     2041 tagcctttcg accagaaaac ggacattgcc cgctccacgg ctgcatcgcg atcgaactct
     2101 ttcggcctta ccatgaggca tggtttgaac catctggact gatctgtcaa gaacccatgc
     2161 agtgggcaga tatctttgca ttttctgagc ccgatcccga tgagagctgc ttctggtcca
     2221 tgtccgcaaa gggtcgaggc tgtgtgaaaa ccattctgcg ggtcgtctgg gcgcacgatt
     2281 gattcaaacc gatcgcctaa cgcgaagcta atgatttctg agaccacgtc ttcacttcta
     2341 ttgttgcgcc ccaacaatag cttccaccgt tttcacacag cctcggtcat tcgcgtcgtt
     2401 taggacatgt cggcgatatg tccggtctac cccagattgt gttgcaaaac tggtcgtttt
     2461 gtcggcgatt gtaggcctgg agttttgggt gtcggcttat tccgctttgc ctttgcggga
     2521 gttgcggcat cgaggcatcg gtagggttgg ccagggtaac tgctaggacg gcggcgagtt
     2581 tgcgctcgac ctgctccaat gccatgtgaa cacccctcca agggtcggaa gccaatcata
     2641 tcattcccgg attgtgagcg ggattctgcc tagataatgc caccagaggt cgccttccgg
     2701 ccctttggcg acgagagacg cgaacgaagg cctctttcag cccgggagcg gagatctttg
     2761 cggaggcccg ggtaaagtcc gtttatgagt ccacggcctg ggcgacttac acaggtgccc
     2821 taaaagtctc cttgaaggtc agcagggccg cgaaggagac ggcggcggcg gccatgatca
     2881 tgaaggcggg gctgtagtcg ttggcggtgc gctcgaccag ccaggtcgcg accagcgggc
     2941 tgaggccgcc gaccacgccc aacgtcacgt tatagcccag cgcgatggtc gtgcagcgca
     3001 cactggccgg caccgcctcg accatgatgg tgggctgggt accgacgaag gcgccgaccg
     3061 ccagcacgaa gcccagctgc cccagcagga cgaaggccgg atcggcctgg tgcatcagcc
     3121 agaacagcgg ccaagcggcg atcaagccca gtgcagtggc gcccagcagg atcggccggc
     3181 ggccaatgcg gtcggaaagc cagcccatcg ccaccatcac cggcaacagg atggccatgc
     3241 tgacggtgtt gatctcgagc gcccgcgccg gcgcgatgcc gtcggcaagc tgcagccagc
     3301 tcacgatgta gacgaacatc agatagaagc cgaccgagtt gaagaccgac agcgcggcca
     3361 gccgcagcag cagcgggccg tggtggcgca gcgtgtcgcg aagcggcgag cgctcggcct
     3421 ttttgtggat ggcgtcctcg tggatgcccc gccgcagcgc gaagcccgcg aggccgacca
     3481 aaaggccgat caggaacggg atgcgccagc cccaggcctc cagcacctcg gccgacatcg
     3541 cctcggccag tacggcgccg gtcgccgacc cggccaggat gccgccgacc gcgccgcagc
     3601 ccgccgtggc gccgatcagg ccgcgccggt cgggccgcgc ctgttcgacc atgaagacga
     3661 tggaggtggt gtactcgccg ccgaccgaca ggccctggat catgcggagc agcgtgagca
     3721 ggatcggcgc ggcgacgccc agcgtctggt agcccggcag cacgccgacc aagaaggtcg
     3781 ggatggccat cgccgccacc gagaaagtaa gcgcggtgcg ccgtccgaag cggtcgccga
     3841 tatagccgat cagcgcgccg ccgaccggtc gcatcaggaa gccgacggcg aagatgccga
     3901 acgccgccag cacctgcgcc accttgtctt cgtggggaaa gaagacacgg ccgatggtgg
     3961 cggcgaagta gccgtagatc gcgaagtcgt accattcgag cgcgttgccg atggcgccgg
     4021 cggcgatggt cctgggcgcc ttgctgttgg acattcaatg cgcctcgtcg atgccgaccg
     4081 gcgaggaaac gtcggtcgag ggtgtgcgcg gcacctggcc ggccagccgc agcgagcgtt
     4141 ccagcaatac ctcgtagatc ggccggccat gcagcctttg ggcgacgaca tgggcggtca
     4201 cgcaggtgac gatcaatggc aagatgagcg cgtagccgcc ggtcagctcg accgccagca
     4261 cgacgccgac cagcggcgcg cggatggtgc ccgagaacag cccgcccatc gcggccacgg
     4321 cgaaggcggc gccgagcatc ggcggcaccg gcagcgcggc ccaggcgagg cctgcctgga
     4381 tcagggcgcc cgcgatcagc ccgacggtgg tggcgaaggt cagcatcggc gagaagatgc
     4441 cggccggcac gccgaccgga tagctcgcca tggtgccgat gaagcgcacg acggcgatca
     4501 gcagcagggt gaggatcggc aggttggcgc cgggcatgct ggggatcaag gtctcgccgc
     4561 cgccgaccgc cagcggcagc acgatggcga gcgcccccac cgccgcgccg acgatcaggg
     4621 cgaaggcgaa gggcgcgcgc ttgaaggtcg ccgcgcgcca atccagcgcc agcaccaggc
     4681 agcggttgaa caacacgccc agcacgccaa gcgccgcgcc cagcaccatg aacgccggca
     4741 gcagcagcag cggcacggcc tgggtgtcga ggcgcagcgg cggcgcgatg ccgcccacca
     4801 gttccatgcc gaaggcgctg gcggccgagg cggcgatcac cgcgacatag gagcggaagg
     4861 tgtagcggaa ctgcttgcgc gtctcctcga tcacgaacag gacggcggcg agcggcgcgt
     4921 tgaaggcggc ggcgaggcca gccgcggcgc cggcggcgag caacgtatgc aggtccatct
     4981 ggccgagccg cagccgctcc gccaggaagg cgccaatggc cgcgcccatg tggatggtcg
     5041 gcccttcgcg gccggcgacc aggccggacg acaggccgag cacgccgccc acgaatttca
     5101 ccggcagcac ctgccgccag cgcacctcgc gcaagccttc gagcgcgccc tcgacctcgg
     5161 gcacgccgct gccggcggcc tccggcgcga tgcgctgcgt cagcaggaag gccagcacga
     5221 cgcccacggc ggcgatgacg gaagcgacgg cgatggtgag cacgcccggg ccgagccacg
     5281 ccaccagcca ggtcggccag cgcagcagcg tgtcgacggt gagatggaag gccgcgccga
     5341 cgatgccggt ggcgaagccg caggcgccgg cgatgcagta gaagacgcca tcggagatcg
     5401 acgggcgcgt cggtcgatct ccaggactca agtcaggacc tccaagtgcg ataacggcgg
     5461 agcaagcgtt cgcccagccg gctccaacat tgtgcagagc agcgcgaaag cgcaagggtc
     5521 atggactctc ggctgcgagg gcacgggccg cgaaacgccg acttggcggg acctataccg
     5581 tcagagcatt acggtcgccg gcctcatatc tcctgatgcg atcggcgcaa cccgttccct
     5641 ccgacgccca gaccttgtcg aacttgtacg cctcggagca ccaatccagg ggagcaagac
     5701 cggccttctc gcgctcgacg ttctgcttct ggaaatccga agtgaacttc tgcttctgct
     5761 cataggtctt ggcgctgttg tagaacaggc cgccgacaag gaccgccgcg cagccactga
     5821 ggacaaacgg aaggaccaat aaagcaagaa atcgcttggg cattgacgtc tcttccgccg
     5881 gcctgctgaa ccatggttgt atatcttaat ggttacacga ccctaaatgg tctgccaccg
     5941 accaacggtt gcaacgttcg gcacgcaggt cgccttgaag aatggcggag gctcaactca
     6001 agccgatgcg gccgcgaaag gcctcgtcgc gcatcgcgcc gcatgcgcga ccggcgcgtg
     6061 cacgccgcgc cgtcgtctct ggctttgcct actgcgtggg cctctggggc agcgtgaatc
     6121 ccgactctcg cagcttcctt tccaacacgg ggattgccgc cgccgtttta cccttctggc
     6181 aatcgtcctg cgccaccgcc gcctcggcgt cgtattggcg gcccggcgaa ttctggacgt
     6241 agcggcgata gagaacagaa agcgcagcgc agtaggccat gtcgctgtct tgggcgtcgg
     6301 tcgtgctcgg caacgcgagc atcgctgcca aaaacgggag gagaaggcgc ttcatgaggt
     6361 ctaatct
//
LOCUS       DASWGA010000314         4992 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2179248, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000314 DASWGA010000000
VERSION     DASWGA010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4992
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2179248"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1028
                     /locus_tag="VF991_07610"
     CDS             <1..1028
                     /locus_tag="VF991_07610"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEX9556344.1"
                     /translation="TTALDSSVGLIHVFRMPVFYVMAGFFTALLLQRYGFRRAADNRL
                     WRIVVPFVVGWIILYPLVMFLAALGRGGVDRALDFILSGKFLAYAHPLHLWFLEYLIV
                     LYLLAIMAVMGIRLVLPQNVRTLLLRLFRAAVQSLWAPLIFAVPSFLAMLLMKHPWLE
                     DPPSFVPVARIVAAYAIPFAFGWLLYLNTDLLETLSRRAWLYAAFAAAASVAYLASFV
                     IPMERDTAFYVARAVHSVALWLLIFSVTGLFLRYLGGHSALRRYLCDSSYFLYVAHMP
                     VLIAFQLLLRDVPLPPLAKIPLALAATIAVLLPLYRYAVRPTFVGAVLNGRRYPGALA
                     PAAAAAD"
     gene            complement(1025..1912)
                     /locus_tag="VF991_07615"
     CDS             complement(1025..1912)
                     /locus_tag="VF991_07615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX9556345.1"
                     /translation="MNSRRKAFLTAIAASAALALGADTVSAQQSPPPLTKEQIAEIVA
                     SPDRSAADRTNDLRRKPEQMLVFIGIRPGINALDLSAAGGYTTELLARAIGPSGVVYG
                     QSRPRDPSRAPTPPAAPEGNSNPTAASGTAPTTAPAPPAGAPRPSPVALEERDSALRS
                     AGVKAAPITAVVRPFEDPVPPELADFDLVTLMFNYHDLGHLGVDRAAMNRAVFQALKR
                     GGFYVIADHSGRPGTGISEAGTLHRVEEAFLRKEVEAAGFKLAAEGNFLRNANDPRDK
                     NTPDPPQPKDEFVLKFVKP"
     gene            complement(1909..3105)
                     /gene="queG"
                     /locus_tag="VF991_07620"
     CDS             complement(1909..3105)
                     /gene="queG"
                     /locus_tag="VF991_07620"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEX9556346.1"
                     /translation="MSRHPPTPKRPPRPATPAELRDAIRDEALRLGFDAVGFAPASLA
                     PEARRERLQRLCQFVAAGWQGDMGWLGERVESRADPRHLWDEAKTVVSLALNYAPAGD
                     PLEVLQHGERAAISVYAQGRDYHDVMKTKLKALGRFIWDTYRHDLKVFVDTAPLMEKP
                     LAQAVGHGWQGKHTNLVSRKFGSWLFLGEILLSVELPADAPETDHCGHCRACLDICPT
                     HAFPAPYQLDARRCISYLTIEHEGPIERELRPLLGNRIYGCDDCLAVCPWNKFAKEAH
                     ETALLAKPALDAPLLAELASLDDTAFRKRFAGTTIKRIGRDRFVRNVAYALGNSGKRE
                     TALPAVEKLLEDPSPLVRGAAVWALSRLAPNQVAQRQRTSHETDAEVCAEWSAARNIG
                     EQRTGP"
     gene            complement(3115..3573)
                     /gene="queF"
                     /locus_tag="VF991_07625"
     CDS             complement(3115..3573)
                     /gene="queF"
                     /locus_tag="VF991_07625"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003613903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HEX9556347.1"
                     /translation="MTKYPHLRQLGRAAALPASPDKAVLETVPNPQPRALYLVRFTAP
                     EFTTLCPMTGQPDFAHLVIDYAPRAKLVESKSLKLYLGSFRNHADFHEACTLAIGWRL
                     AKTLAPRWLRIGGYWYPRGGMPIDVFWQTGQPPRGLWLPDPGVAPYRGRG"
     gene            3602..4801
                     /locus_tag="VF991_07630"
     CDS             3602..4801
                     /locus_tag="VF991_07630"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9556348.1"
                     /translation="MTHRVAIVGAGPSGFYAADGLLRAKPDLHIDVIDRLPTPYGLVR
                     AGVAPDHQGTKAVVRQFDRLLAQPDLRFAGNIEIGRDLSWDELSAAYDAVIVATGMVI
                     DKKLGVPGEDLPHVWGSWRLVGWLNGHPDYRQAPDLSQVKSVAVIGNGNVALDVARVL
                     AKSAEEMAKSDIVAEAGAAIAHAPITDIHVIGRRGPEHASFTNNELAEMGRLARTVAV
                     TDAKGLDAMPPASDPTPERLRKTKNLEILKGFANNKPGAKPVTVHFVFNTAPVAFRPG
                     EVDVTPNSVVGGKLKADLVVTCIGYTGQDFPRRDDIFAVGWAKRGPTGTIPTNRAESH
                     AVAQQVMAWLKPRDPKSGPDVLPIAIDAAGWHRIDKHEVAAGSAQGRPRVKLTDWQAL
                     LDVAQGG"
BASE COUNT          728 a         1695 c         1683 g          886 t
ORIGIN      
        1 tcaccacggc gctcgattct tcggtcgggc tgatccatgt ctttcgtatg cccgtcttct
       61 acgtcatggc gggatttttc acggcccttc tgctgcagcg ctacggcttc cggcgcgccg
      121 ccgacaaccg cttgtggcgc atcgtcgtgc ccttcgtcgt cggctggatc atcctctatc
      181 cgctggtgat gtttctggcg gcgctcgggc gcggcggcgt ggatcgcgcg ctcgacttca
      241 tcctgtccgg caaattcctg gcctacgctc atccgctgca tctgtggttt ctggaatacc
      301 tgattgtgct ctacctgctc gcgatcatgg ccgtgatggg catccgcctc gtgctgccgc
      361 aaaatgttcg caccctgctg ctgcgtctct tccgcgcggc cgtgcagtca ctgtgggcgc
      421 cgctgatctt cgcggtgccg tcgttcctcg ccatgctgct gatgaaacat ccctggctcg
      481 aggatccgcc gtccttcgtg ccggtcgccc gcatcgtggc ggcctacgcc atcccgttcg
      541 cgttcggctg gttgctttac ctcaacaccg acctgctcga gacgctcagc cggcgcgcct
      601 ggctctacgc ggccttcgcg gcggccgcga gcgtcgccta tctcgccagc ttcgtgattc
      661 caatggagcg cgacacggcc ttctatgtcg cgcgcgccgt gcattccgtg gcgctatggc
      721 tgctgatctt ctcggtcacc ggcctgttcc tgcgctatct cggcgggcac agcgcgctca
      781 ggcgttatct ctgcgattcg tcgtacttcc tctacgtcgc ccacatgccg gtgctcatcg
      841 cctttcaatt gctgctgcgg gacgtcccgc tgccgccgct ggcaaagatc ccgctggccc
      901 tggccgcgac cattgcggtc ctgctgccgc tctaccgcta tgccgttcgc ccgacctttg
      961 tcggcgcggt gctgaacggc cggagatatc ccggcgcgct cgcgcccgcg gccgccgctg
     1021 ccgactaggg cttgacgaac ttcagcacga attcgtcctt gggctgcggc ggatccggcg
     1081 tgttcttgtc gcggggatcg ttggcattgc gcaggaagtt tccttccgcc gccagcttga
     1141 agcccgccgc ttcgacttcc ttgcgcagga acgcttcctc gacccgatgg agcgtgccgg
     1201 cctcggagat gccggtgccg ggccggcccg aatgatcggc gatgacatag aagccgcccc
     1261 gcttgagcgc ctggaagacg gcccggttca tggccgcgcg atcgacgccg agatgtccga
     1321 ggtcgtgata gttgaacatc agggtcacga gatcgaagtc cgcgagctcg ggcggcacgg
     1381 gatcctcgaa cggccggacg acggcggtga tcggcgcggc cttgacgccg gcgcttctga
     1441 gcgcgctgtc gcgctcctcc agggcgacag gggacggacg cggcgcgcca gccgggggcg
     1501 ccggcgccgt cgtgggggcc gtaccggacg cggcggtcgg attgctgttg ccctcgggtg
     1561 cggcaggcgg tgtcggcgcc cggctgggat cgcgcggccg gctctggccg tagacgacgc
     1621 ccgacggtcc gatcgcccgg gcgagcagtt cggtggtgta gccgccggcc gcgctgagat
     1681 cgagtgcgtt gatgccggga cgaatgccga tgaagaccag catctgctcc ggcttgcgac
     1741 gcagatcgtt ggtgcgatcg gcagcgctgc gatccgggct cgccacgatc tcagcgattt
     1801 gctccttcgt caggggtggc gggctctgct gcgccgacac agtgtcagca ccgagcgcca
     1861 aggctgcact ggcagcgatc gccgtcagga aagctttccg tcggctattc atgggcctgt
     1921 cctttgctct ccgatgttac gcgctgcgct ccattcggcg cagacctcgg cgtcggtctc
     1981 gtggctcgtg cgctgccgtt gcgcgacctg gttgggcgcg agacgtgaca gcgcccacac
     2041 tgccgcgccg cgcaccaaag gggaagggtc ctccaggagc ttttcgacgg ctggcagcgc
     2101 ggtctcgcgc ttaccgctgt tgcccagcgc ataggcgacg ttgcgcacga aacgatcgcg
     2161 gccgatgcgc ttgatcgtcg tgccggcgaa ccgcttgcgg aacgctgtat cgtcgagtga
     2221 cgcaagctcg gccaacagcg gcgcgtcgag cgcgggcttg gcgagcaacg cggtctcgtg
     2281 cgcctccttg gcaaacttgt tccacgggca gaccgccagg caatcgtcgc agccatagat
     2341 gcggttgccg agcaaaggcc gcaattcgcg ctcgatcggg ccctcatgct cgatggtgag
     2401 gtaagagatg cagcgtcgcg cgtcgagttg gtagggcgcg ggaaaggcat gggtcgggca
     2461 gatgtcgaga caggcgcggc agtggccgca atggtcggtc tcgggcgcgt cggccggcag
     2521 ctcgaccgac agcaggatct cgcccaggaa cagccaggag ccgaatttgc gcgacaccag
     2581 gttggtgtgc ttgccctgcc agccgtggcc gaccgcctgc gccaagggct tttccatcag
     2641 cggtgcggtg tcgacgaaaa ctttcagatc gtggcgatag gtgtcccaga tgaagcggcc
     2701 gagcgccttg agcttggtct tcatcacgtc gtgatagtcg cggccctggg catagaccga
     2761 gatcgccgcg cgctcgccgt gctggaggac ctcgagcgga tcgccggccg gcgcatagtt
     2821 cagcgccagc gacaccaccg ttttggcttc gtcccacaga tgccgcggat cggcgcgtga
     2881 ctcgacgcgt tcgccgagcc agcccatgtc gccctgccag cccgccgcga cgaactggca
     2941 gagccgctgc agccgctcgc ggcgcgcctc gggcgccagg ctcgccggcg cgaagcccac
     3001 ggcgtcgaag ccgagcctca gcgcctcgtc gcggatggcg tcgcgcagct cagcgggagt
     3061 cgccggccgc ggcgggcgtt tgggcgtcgg cggatggcgg ctcattcctc tcggctatcc
     3121 tctgccacga tagggcgcga ccccaggatc gggcagccac agaccgcgcg gcggctggcc
     3181 ggtctgccag aacacgtcga tcggcatgcc gccacgcgga taccagtagc cgccgatccg
     3241 cagccagcgc ggcgccagcg tcttggccag ccgccagccg atggccagcg tgcaggcctc
     3301 gtggaagtcg gcgtggttgc gaaagctgcc gagatagagt ttcagcgact tgctctcgac
     3361 cagcttggcg cgcggcgcgt agtcgatcac gagatgggcg aagtcgggct ggccggtcat
     3421 cgggcagagg gtggtgaatt caggcgcggt gaagcgcacc agatacaacg cccgcggctg
     3481 cggattgggc acggtttcca gcaccgcctt gtcgggcgag gcggggaggg cagcggcacg
     3541 gcccagctga cgcaaatgag ggtatttagt catgtcacca tcatatgcta agcgggccgc
     3601 catgactcat cgcgtcgcca tcgtgggcgc gggcccgtcc ggcttctatg cggccgacgg
     3661 gctgttgcgc gccaaacccg acctgcatat cgacgtcatc gaccgcctgc cgacgcccta
     3721 cgggctggtg cgcgccggcg tcgcccccga ccatcagggc accaaggccg tggtccgcca
     3781 gttcgaccgg ctgctggccc agcccgacct gcgctttgcc ggcaatatcg agattggccg
     3841 cgatctttcc tgggacgagc tcagcgcggc ctacgatgcc gtgatcgtcg ccaccggcat
     3901 ggtgatcgac aagaagctcg gcgtgccggg cgaggatctg ccgcatgtct ggggctcgtg
     3961 gcgcttggtc ggctggctga acggccatcc cgactaccgc caagcccctg acctttccca
     4021 ggtcaagtcg gtggccgtca tcggcaacgg caacgtcgcg ctcgacgtgg cccgcgtgct
     4081 ggccaagagc gccgaggaga tggccaagag cgacatcgtg gcggaagccg gcgccgcgat
     4141 cgcccacgcg ccgatcaccg acatccatgt gatcggccgg cgcgggcccg agcatgcctc
     4201 cttcaccaac aacgagctgg ccgaaatggg ccggctggca cgtaccgtgg cggtcaccga
     4261 cgccaagggg ctggacgcta tgccgcccgc gtccgatccg acgcccgagc gcctgcgcaa
     4321 gaccaagaac ctggagatcc tcaagggttt tgccaacaac aagccggggg ccaagccggt
     4381 gaccgtgcac ttcgtcttca acaccgcgcc cgttgccttt cggcccggcg aggtcgacgt
     4441 gacgccaaat tcagtggtgg gcgggaagct caaggccgac ctggtcgtga cctgcatcgg
     4501 ctacaccggc caggacttcc cgcgccgcga cgacatcttt gccgtcggct gggccaagcg
     4561 cggacccacc ggcacgatcc cgaccaaccg cgccgagagc cacgcggtgg cgcagcaggt
     4621 catggcctgg ctcaagccgc gcgaccccaa gagcgggccc gacgtgctgc cgatcgcgat
     4681 cgatgccgcc ggctggcacc gcatcgacaa gcacgaagtt gccgccggct cggcccaggg
     4741 tcggcctcgc gtgaaattga cggactggca ggcgctgttg gacgtcgcgc agggcggctg
     4801 acggccctat tgtgcggctg gccggggagg tcacgaggga gctgtcatgt tgaaaatagg
     4861 tcgtcgtttc gcctgtgcgc tcgttgccgt cgccgccttc gctggccccg cctcggccca
     4921 gaccacactc aaggccgcgc tgcattcgga tctcaagatc gtcgatccga tctggaccac
     4981 cgcgctgatc tc
//
LOCUS       DASWGA010000315         2947 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1298139, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000315 DASWGA010000000
VERSION     DASWGA010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2947
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298139"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..817
                     /locus_tag="VF991_07635"
     CDS             <1..817
                     /locus_tag="VF991_07635"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX9556349.1"
                     /translation="QLVERVNAYFGHKMIDDIRLVQGAIATPPAPSAIPAPDPETVRR
                     ATERAASVKDPALRAALARLGARLASRRQVLVGVLGAAAVARELRAEDLSRDKLLGAL
                     PDDHVLGKADAPNILIDYASFTCPHCANFYIAVMPSLRPEWIDTGRLRLIHRHFPSDL
                     VATRASQLAECAGPDKFFARVELLFRRQVDWLSVGNPEVEMVKALADQGVTPQEAQAC
                     FANDRLLDKVIADVQSGQTLGVTFTPTLFINEENYANPGGAEAISAILRQVGR"
     gene            872..1531
                     /locus_tag="VF991_07640"
     CDS             872..1531
                     /locus_tag="VF991_07640"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX9556350.1"
                     /translation="MRNILIVAGGAVAVAAIAAGVYFGTRPPVAGPPPVAAASTADKS
                     ALLAVQPGDHVLGDPKAPVTLIEYASFTCPHCAHFHTQVLPELKKKWIDTGKVKLIYR
                     DFPLDQVAAQAAQIAECAGNDRYFGVIDLIFRGQPTWATASDPIAELAKPLRIAGLGE
                     KEIKACLANEAKANEVVADRRGGETLGVNSTPTLFIDGQMYSGARSVEELDGVFGKLV
                     K"
     gene            1550..>2947
                     /locus_tag="VF991_07645"
     CDS             1550..>2947
                     /locus_tag="VF991_07645"
                     /inference="COORDINATES: protein motif:HMM:NF024867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9556351.1"
                     /translation="MVQFDKLRLSGFKSFVDPTELAIEPGMTGIVGPNGCGKSNLVEA
                     MKWVMGETSAKQMRGSEMEDVIFSGAGTRPARNIAEVLLTLDNKTRTAPAMVNDADQL
                     DIVRRIERGHGSAYSVNGREIRARDVQTLFADAATGSRSTALVSQGRIGALINAKPID
                     RRTIIDEAAGITGLYARRHEAELRLRAAEQNLARVQDVLVALEEQHKGLKRQARQASR
                     YRNLSDHIRRAEAAVLALKLAAAERDLAEASERLKEAEAGVADLTRLVGLATTAQAEA
                     ATALPPLRNDEAAAAAALQRLRVAHDALTAEAERVAQAQQEAETRLQQTESDLARERG
                     RKNDAETATAELDGQRTRLEQERVGEEDRAAAAAEARDTAQAETHAAETEHDRLTRQI
                     ADDEALRDSVGREIAELQERLRRLVARREEIANQQRQIESELAGLPALTEVEAALDAA
                     RAAFEDARQQGQQAID"
BASE COUNT          500 a         1057 c          987 g          403 t
ORIGIN      
        1 ccagctggtg gagcgcgtga acgcctattt cgggcacaag atgatcgatg acatccggct
       61 ggtgcagggc gcgatcgcca cgccgccggc gccgtcggcg atccccgcgc cggatcccga
      121 gaccgtcagg cgggccaccg agcgtgcggc ctcggtcaag gaccccgcac tcagggcggc
      181 actggcgcgg ctgggcgcgc gcctcgccag ccggcggcag gtgctggtgg gtgtgctcgg
      241 cgcggcggcc gtcgcacgcg agctgcgcgc cgaggacctg tcgcgtgaca agcttttagg
      301 cgcgctgccg gacgaccatg tgctgggcaa ggcagacgcg cccaacatcc tgatcgacta
      361 cgcctcgttc acttgtccgc actgcgccaa tttctacatc gcggtgatgc ccagcctgcg
      421 cccggaatgg atcgacaccg gcaggctgcg gctgatccac cgtcattttc cctccgatct
      481 ggtggcgacc cgggccagtc agctcgccga atgcgccggt cccgacaaat tcttcgcccg
      541 ggtcgagctg ttgtttcgcc ggcaggtgga ctggctgtcg gtcggcaatc ccgaggtcga
      601 aatggtcaaa gccctggccg accagggggt gacgccgcag gaggcccagg cctgcttcgc
      661 caacgaccgc cttttggaca aagtcatcgc cgacgtgcag tccggccaga ccctcggtgt
      721 gaccttcacg ccgaccttgt tcatcaacga ggagaactac gccaatcccg gcggcgccga
      781 ggccatatcg gcaattttac gccaggtggg ccggtaaacg tttgactccc cacaggggta
      841 gttctcaaga tatagtggag aggaagacgg aatgcggaat atcttgatcg tcgccggcgg
      901 ggccgtggcg gtggccgcga tcgcggctgg cgtctatttc ggcacccgtc cgcctgtcgc
      961 cggcccgccg ccggtcgccg cggcgtcgac ggcagacaag tccgccctgc tcgccgtcca
     1021 gcccggcgac catgttctgg gcgaccccaa ggcgcccgtc accttgatcg aatacgcctc
     1081 gttcacctgc ccccattgcg cgcacttcca cacccaggtc ctgcccgagc tcaagaagaa
     1141 gtggatcgac accggcaagg tgaagctgat ctaccgcgac tttccgctcg accaggtcgc
     1201 ggcccaggca gcccagatcg ccgagtgcgc cggcaacgac cgctatttcg gcgtgatcga
     1261 cctcattttc cgcggccagc cgacctgggc caccgcctcc gatcccatcg ccgagctcgc
     1321 caagccgctg cgcatcgccg gcttgggcga gaaagagatc aaggcctgcc tcgccaacga
     1381 ggcgaaagcc aatgaggtgg tcgccgaccg tcgcggcggc gagaccttgg gcgtcaactc
     1441 gacgccgacg cttttcatcg acggccagat gtattccggc gcgcgctcgg tcgaagaact
     1501 cgacggcgtg ttcggcaaac tcgtcaagta accagccagc gtggtgtaga tggtgcagtt
     1561 cgacaaactc cggctctccg gcttcaagtc cttcgtcgac ccgacggaac tcgccatcga
     1621 acccggcatg accggcatcg tcggccccaa cggctgcggc aagtcgaacc tcgtcgaagc
     1681 catgaaatgg gtgatgggcg agacctcggc caagcagatg cgcggcagcg agatggagga
     1741 cgtcatcttc tccggcgccg gcacgcggcc ggcgcgcaac atcgccgagg tgttgctgac
     1801 cctcgacaac aagacgcgca ccgcgcccgc catggtgaac gatgccgacc agctcgacat
     1861 cgtgcgccgc atcgagcgcg gccacggctc ggcctattcg gtcaacggcc gcgagatccg
     1921 cgcccgcgac gtgcagacgc tgtttgccga tgcggcgacg ggctcgcgct cgaccgccct
     1981 ggtgagccag ggccgcattg gcgcgctgat caacgccaag ccgatcgacc ggcgcaccat
     2041 catcgatgaa gccgccggca tcaccggcct ctatgcccgc cgccacgagg ccgagctccg
     2101 gctgcgcgcc gccgagcaga acctggcccg ggtgcaggac gtgctggtgg cgctcgagga
     2161 gcagcacaag gggctgaagc gccaggcgcg ccaggccagc cgctatcgca acctctccga
     2221 ccatatccgc cgcgccgaag ccgccgtgct ggcgctgaag ctcgccgctg ccgagcgcga
     2281 cctggctgag gccagcgagc gcctgaagga agccgaggcc ggcgtcgccg atctcacgcg
     2341 cctggtcggc ctcgccacca cggcgcaggc cgaggcggcg acggcgctgc cgccgctgcg
     2401 caacgacgag gccgccgcgg ccgccgcctt gcagcggctg cgcgtggcgc acgatgcgct
     2461 gaccgccgaa gccgagcgcg tcgcccaggc ccagcaggag gccgagaccc gcctgcagca
     2521 gaccgagtcc gatcttgccc gcgagcgcgg ccgcaagaac gacgccgaga ccgcgaccgc
     2581 cgaactcgac ggccagcgca cgcggctgga gcaggagcgg gtgggcgagg aggatcgcgc
     2641 cgccgccgct gccgaggcgc gcgatacggc gcaagccgag acccatgcgg ccgagaccga
     2701 acacgaccgg ctgacccgcc agatcgccga cgacgaggcg ctgcgcgaca gcgtcggccg
     2761 cgagatcgcc gaactgcagg agcgcctgcg ccggctcgtc gcgcgccgcg aggaaatcgc
     2821 caaccagcag cgccagatcg agagcgagct tgccggcctg ccggcgctga ccgaggtcga
     2881 ggccgcgctc gacgccgccc gtgccgcctt cgaggacgcg cgccagcagg gtcagcaggc
     2941 gatcgat
//
LOCUS       DASWGA010000316         2813 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_665948, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000316 DASWGA010000000
VERSION     DASWGA010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_665948"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1449
                     /locus_tag="VF991_07650"
     CDS             <1..1449
                     /locus_tag="VF991_07650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556352.1"
                     /translation="NEIFKRRGYIPPDLFGKLLSAVIEDPSALPAYNVGAEVDPNATA
                     LSAERRERTEALVLKSYDRVNGGFGDTHRFLHGDTLEWALERGRDLQRNRDPAQWREV
                     SAKTLAGARRLIDPVWGGMFQYSDKLDWSGPHYEKLLNIQRDAIRSYVLAWQIGHDPA
                     DLAAARDVARWLMDFMRSPDGAFYSSQDADAGSLHGDVFYAKSDAERRAGPQPPIDRT
                     VYARENGWAIASLAALYDVTGDHALLEAAARALDWTLAHRRAPNGGFGHGRAADDDTH
                     LGDSLALAEAAQALYRSTAERRYLALATELGEIIVRDHRDPAGGFMVRRPDPGAKGVL
                     ATPVKQVDENVATVRLLNLLARQTGKPIFREAAQQGMRYLISLTEDDLVVPGALLADR
                     ELGREPAHVTIVGAKDDPAARALYEAARLYPTRYLRIEWLDRREGPLPASDIEYPEMP
                     QAAAFACANGACSVPVFTAAEVHRIVAKVDDR"
     gene            1536..2468
                     /locus_tag="VF991_07655"
     CDS             1536..2468
                     /locus_tag="VF991_07655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0061077 - chaperone-mediated protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone YbbN"
                     /protein_id="HEX9556353.1"
                     /translation="METMLKGAPPQAAPADLIKDSDQTKFAKDVLEASRTVPVIVDFW
                     APWCGPCKQLQPAIEKVVKAANGAVKLVKINIDQNQMLAQQLRIQSIPAVYAFFGGRP
                     VDGFMGAVPESQVKQFVDRLIQAAGGAGPEGAADELAELLDHAKAAVAQNDFALATRI
                     YNEILGVEPENVAALAGLARCHLQAGNADQAKSVLARVPAKDKTNADVVAVQAAVDLA
                     EQAKAAGPLGELKAKAAADPKDFQARLDLALAYWAGDQRQEAIDELLAMIKADRKWNE
                     EAARAQLLKFFEALGFADPLAVDGRKRLSTILFS"
     gene            2482..>2813
                     /locus_tag="VF991_07660"
     CDS             2482..>2813
                     /locus_tag="VF991_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX9556354.1"
                     /translation="MAGRNPFEPGFEQLPETLPIFPLSGVLLLPGGKLPLNVFEPRYL
                     AMVFDALAGPRLIGMVQPVQPGGYAGDGLPTADGKPQVHRIGCAGRITSFNETEDGRL
                     LLALSGVCR"
BASE COUNT          455 a         1003 c          919 g          436 t
ORIGIN      
        1 aacgagattt tcaagcgccg cggctacatc cctcccgacc tcttcggcaa gcttttgtcc
       61 gccgtgatcg aggatccatc ggcgctgccg gcgtacaacg tcggcgccga ggtcgatccc
      121 aatgccaccg cactctcggc agagcggcgc gagcgcaccg aggcgctggt gctcaagagt
      181 tacgaccgcg tcaatggcgg cttcggcgac acccaccgct tcctccatgg cgacacgctc
      241 gaatgggcgc tcgagcgcgg ccgcgacctg cagcgcaata gggatcccgc ccagtggcgc
      301 gaggtttcag cgaaaacgct tgccggcgca cgacggctga tcgatccggt gtggggcggc
      361 atgttccagt attccgacaa gctcgactgg tcgggcccgc actatgaaaa gctgttgaac
      421 atccagcgcg atgcgatccg cagctacgtg ctcgcttggc agatcggcca cgatcccgca
      481 gacctcgccg cggcgcgcga cgtggcgcgc tggctgatgg atttcatgcg ttcgccggac
      541 ggcgccttct attccagcca ggatgccgac gccggttcgc tgcacggcga tgtcttctac
      601 gccaagtccg atgccgagcg ccgcgccggg ccgcaaccgc cgatcgatcg caccgtctac
      661 gcccgcgaga atggctgggc gatcgcaagc ctcgccgcgc tctacgacgt caccggcgat
      721 cacgccctgc tcgaggcggc ggcgcgtgcc ctcgactgga ccctggccca tcgccgtgcg
      781 cccaatggcg ggttcggcca cggccgcgcc gctgacgacg acacgcatct cggcgactcg
      841 cttgccctgg ccgaagcagc ccaggcgctc tatcgcagca ccgccgagcg gcgctatctc
      901 gcgctggcca cggagctggg cgagatcatc gtgcgcgacc atcgcgatcc cgccggcggc
      961 ttcatggtgc gccggcccga ccccggcgcc aaaggcgtgc tggccacgcc ggtgaagcaa
     1021 gtcgacgaga acgtcgccac cgtccggctg ctgaacctgt tggcccgcca aaccggcaag
     1081 cctattttcc gcgaagccgc ccagcagggc atgcgctacc tgatctcgtt aaccgaggac
     1141 gatctcgttg tgccgggcgc gctgctggcg gaccgcgagt tgggccgcga gccggcgcat
     1201 gtcaccatcg tcggcgccaa ggacgacccc gccgcgcgcg ccctttatga agccgcccgc
     1261 ctctatccga cgcgttattt gcgcatcgaa tggctggatc gccgcgaagg gcccttgccc
     1321 gcttccgaca tcgagtatcc cgagatgccg caagcggcgg ctttcgcctg cgccaacggc
     1381 gcctgttcgg tgccggtttt cacagctgcc gaagttcatc gcatcgtcgc caaggtcgac
     1441 gaccgctagc ccgccggaac gacggggccc cttgcgtccc cagggagcgg ggcccacatt
     1501 gcgggcgacg cgaaaattcc cccattcgag gacccatgga aacgatgctg aagggcgccc
     1561 cgccgcaggc cgcccccgcc gacctcatca aggacagcga ccagaccaag ttcgccaagg
     1621 acgtgctcga agcctcgcgc acggtgccgg tgatcgtcga cttctgggcg ccctggtgcg
     1681 ggccctgcaa gcagttgcaa ccggccatcg agaaggtggt gaaggccgcc aacggcgcgg
     1741 tgaaactggt caagatcaac atcgaccaga accagatgct ggcccagcag ctgcgcatcc
     1801 agtcgatccc ggcggtctat gccttcttcg gcggccggcc ggtcgacggc ttcatgggcg
     1861 cggtgccgga aagccaggtc aagcagttcg tcgaccgcct gatccaggcg gcgggcggcg
     1921 ccgggccgga gggcgcagcc gacgagctgg ccgaacttct ggaccatgcc aaggcggcgg
     1981 tggcgcaaaa cgactttgcg ctcgccacac gcatctacaa cgagatcctg ggcgtcgagc
     2041 ccgagaatgt cgcggcgctg gccggcctgg cgcgctgcca tctgcaggcc ggcaatgccg
     2101 accaggccaa atcagtgctg gcgcgcgtcc cggccaagga caagaccaac gccgacgtcg
     2161 tcgccgtcca ggcggcggtc gatcttgccg agcaggccaa ggcggccggc ccgctcggcg
     2221 agctcaaggc caaggccgcg gccgatccca aggacttcca ggcgcgcctt gacctcgcac
     2281 ttgcctattg ggccggcgac cagcgccagg aagcgatcga cgagttgctc gccatgatca
     2341 aggccgaccg caagtggaac gaggaggccg cccgcgcgca gctcctgaag ttcttcgagg
     2401 cgctgggctt tgccgatcct ctggccgtcg acggccgcaa gcggctgtcg accatcctgt
     2461 tttcctgagc ggtttttctg agtggccggc cgcaatccct tcgagcccgg cttcgagcag
     2521 ctccccgaga cgctgccgat ctttccgttg tcgggcgtgt tgctgctgcc gggcggcaag
     2581 ctgccgctca acgtcttcga gccgcgctat ctcgccatgg tgttcgacgc cctggccggc
     2641 ccgcgcctga ttggcatggt gcagcccgta cagcccggcg gctacgccgg cgacggcctg
     2701 ccgacggccg acggcaagcc gcaggttcat cgcatcggct gcgccggccg catcacgagc
     2761 ttcaacgaga ccgaggacgg ccgcctgctg ctggcgctga gcggcgtgtg ccg
//
LOCUS       DASWGA010000317         2187 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2066299, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000317 DASWGA010000000
VERSION     DASWGA010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2066299"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1096
                     /locus_tag="VF991_07665"
     CDS             <1..1096
                     /locus_tag="VF991_07665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX9556355.1"
                     /translation="TNPTVYVAPANPLTPPDELSGLAFSGWEHAHVVLGGESFVALAE
                     GMQNALWALGRAPLQHRSDSLSAAFRNLDRDAQEDLTRRYEALCAHYGMEPTRNNRGV
                     AHENGSIESPHGHLKQAIEDALLLRGTRDFVDLDAYRRFIDEIVGRRNARNAKRLDLE
                     RPALQRLPTRRTADYEETIVSVTSTSGFILKRVFYSVPSRLIGHRLRVRLYDDRLECF
                     LGATPLMTLRRGRPHADRKHGHVVDYRHVIHALRRKPMALLNLVYREQLFPRRAYQRA
                     FEVLLARDSEKRACRTMVGLLALAHDRACEAELAQAIDAELDAGRLPDLHSLGRRFAP
                     DLTAIPDITVELVPLHLYDELGTVRAGGAA"
     gene            1093..1866
                     /gene="istB"
                     /locus_tag="VF991_07670"
     CDS             1093..1866
                     /gene="istB"
                     /locus_tag="VF991_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX9556356.1"
                     /translation="MKTTDPIDAARLALLLAELRLPAVKQVWADLAAQADKEGWPAAR
                     FLAALAEHEMAERSRRRIERHLAEARLPPGKTLDTFDFEAVPVVSKAQIMALAAGDAW
                     LDKGANLILFGPPGTGKSHLAAALSFALVENGWRVLFARTTDLVQRLQIARRELTLEA
                     AIARLDKYHLLILDDLAYVTKDQAETSVLFELIGARYERRSLLVTANQPFGEWGKIFP
                     DQAMTLAVVDRLVHHATIFEMNVESYRRRAALERKRGSG"
BASE COUNT          373 a          771 c          661 g          382 t
ORIGIN      
        1 cacgaatcca acggtttatg tcgctcccgc caaccccctc accccgcctg acgaattatc
       61 cgggctagcc ttttcgggct gggagcacgc ccatgtcgtg ctcggcgggg agagcttcgt
      121 ggcgctggcc gagggaatgc agaatgcatt gtgggcgctc ggccgagctc ccttgcagca
      181 tcgcagcgac agcctgtcag ccgccttccg caacctcgat cgtgacgcgc aggaggatct
      241 gacgcgtcgc tacgaggcgc tgtgcgccca ttacggcatg gagccgaccc gcaacaatcg
      301 cggcgtggcg cacgagaacg gctcgatcga aagtccgcat ggccatctga agcaagcgat
      361 cgaggacgcg ctcttgctgc gcggcacgcg cgacttcgtc gacctggatg cctatcgtcg
      421 cttcatcgac gagatcgtcg ggcggcgcaa cgcacgcaac gccaagcggc tcgatctcga
      481 gcgcccggcc ctgcagcggc tgccgacacg ccggacggcg gattacgagg agaccatcgt
      541 cagcgtcacc tcgacgagcg gcttcatcct caagagggtg ttctactcgg tgccgtcgcg
      601 cctgatcggc catcgcctgc gcgtgcggct ctacgatgac cggctcgaat gcttcctcgg
      661 cgcgacgccg ctgatgacgc tgcgccgcgg ccgtccgcac gccgaccgca agcacggcca
      721 cgtcgtcgat taccggcacg tcatccatgc cctgcgccgc aagccgatgg ccttgcttaa
      781 cctggtctat cgagagcagc tcttcccacg ccgcgcttat cagcgcgcct tcgaggtgct
      841 gctggcgagg gacagcgaaa agcgggcgtg ccgcaccatg gtcgggctgt tggcgctggc
      901 gcatgatcgt gcctgcgagg ctgaactcgc ccaggccatc gatgccgaac tggatgccgg
      961 cagattgccc gatctccata gcctcggtcg gcgctttgcg cctgatctca ccgccattcc
     1021 cgacatcacc gtcgaattgg tgccgcttca tctctatgac gagctcggca ccgtccgggc
     1081 agggggtgcg gcatgaagac gaccgatccc atcgacgccg cccgtctcgc gctgcttctt
     1141 gccgagttgc gacttcccgc cgtcaagcag gtctgggccg acctcgccgc ccaggccgac
     1201 aaggagggct ggccggcagc gcgcttcctt gcggccttgg ccgagcatga gatggccgag
     1261 cggagccgac gccgcatcga acgccatctc gccgaagccc ggctgccgcc cggcaagacc
     1321 ctcgatacct tcgacttcga ggccgtcccg gtggtcagca aggctcagat catggcgctg
     1381 gccgccggcg atgcctggtt ggataagggc gccaatttga tcctgttcgg gccgcccggc
     1441 accggcaaga gtcacttggc ggcagctctc agcttcgccc tcgtcgaaaa cggctggcga
     1501 gtgctgttcg cccgaaccac tgacctcgtc cagcggctgc aaattgcccg ccgcgaactc
     1561 actctcgaag ccgccatcgc caggctcgac aaataccatc tgctgatcct cgacgacctc
     1621 gcctatgtca ccaaggatca ggccgaaacc agcgtcctgt tcgagctcat cggcgcccga
     1681 tacgagcggc gatccttgct ggtcaccgcc aaccagccgt tcggcgaatg gggaaagatc
     1741 ttccccgacc aggcgatgac gctggccgtc gtcgatcgcc tggtccacca cgccaccatc
     1801 ttcgagatga acgtcgagag ctaccgacgc cgcgccgcgc ttgaacgcaa acgcggctcc
     1861 ggatgatcgc cggcccagcg acaatcaaca ccgccacctg attgtcgcgc cgcgacaatc
     1921 aaaacctcgc gcgtcctctt gcgcgacaat gacaacgcgg cgatcatgcc gacgccgcga
     1981 cgccggggtg ctcatcctga ttgtcgccga gccccgtgat tgtgggcttc ggcggctggt
     2041 tggccttcaa gttcctcttc gccggttcga acctcgccgg ttcaaaccgc atctacgcgg
     2101 tcgacaacca aggccaactg cgttcctacg gcgacactgg aaccctcggc aatgtttcga
     2161 gtcccatggt cgtcggcttc ggtgggt
//
LOCUS       DASWGA010000318         3445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1558506, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000318 DASWGA010000000
VERSION     DASWGA010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3445
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1558506"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..1075)
                     /locus_tag="VF991_07675"
     CDS             complement(35..1075)
                     /locus_tag="VF991_07675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556357.1"
                     /translation="MTTVVSITNGGFAINGVPTYAGRRWKGHRIEGLLFNSRMANAIA
                     DDENPATRGAWAYADGEWDAERNTREFIAALPTYRAHGLLAVCLNLQGGSPQGYSWHQ
                     PWRIGGFTADGVLKPAWAARLEKVIVACDRLGMVVILGLFYGKQSGTLKDEAAVKAAV
                     TNTVDWLVERAATNVLIEIGNEVDLEGVFAHPIIAAQRCHELIELARKRSQGQLLVST
                     SLLALGAPPAGILATADFLLPHGNRIHGPDGPLQPSPHGIRLQVANWRAAPGYRGQPI
                     VYNEDDHFAFDKPDNHFVAAVESGASWGYFDYRRSRERFEDGFQSLPIDWTISSRRKR
                     AFFGLLKEITGA"
     gene            complement(1176..2774)
                     /gene="ggt"
                     /locus_tag="VF991_07680"
     CDS             complement(1176..2774)
                     /gene="ggt"
                     /locus_tag="VF991_07680"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9556358.1"
                     /translation="MPSFTYDFPYPSKKLPVFAANVVASSQHLAATAGLRMLARGGNA
                     VDAAIASAIAITVVEPTMNGIGADAFCILWDGSKLVGLNASGHSPALMTPDQYKGQDK
                     MPSVGWGSVSTPGAVSLWVELHKRYGKLAFADLFEPAIKYASDGFRVSYMVARQWERA
                     IDRLKGQESWLKAFLPGGRPPKPGEIWRFADQAKTLTMIAETKGEAFYRGELAEAMDK
                     YARETGGALRKKDLEQHKADWVDPIGLTYRGTTLHEIPPSGQGIAACMALGILENFDL
                     AGHDCDGPEVTHLRIEAMKLAFADIWRYVADPRFMEVTPAQMLDKHYLKSRAKLIDPK
                     KAKDFGPGVPKDGGTIYLGAADASGMMVSLIQSNYRGFGSGIVVPGTGIALQNRATGF
                     VTTEGHPNQVGPNKRPFHTIIPGFITKDGKPVATFGLMGGAMQPQGHMQLFSRIVDYG
                     QNPQAAIDGPRWRVHEDDKTVWAEEHMPAATLAGLEARGHKITRTKSPSFDFGSSQII
                     WRFPDGGPYLAASESRRDGAAVGF"
     gene            complement(2786..3379)
                     /locus_tag="VF991_07685"
     CDS             complement(2786..3379)
                     /locus_tag="VF991_07685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556359.1"
                     /translation="MTSSRRVILLGGASLALAGCFDTPCEEHNPAQKAFLDGLRALAK
                     PALASNNPLQVEEAVKQSVALAEKVGAFSDWCGTLTRIEGNAETVAITVDIGRQVSLY
                     AFNDWALAFAGSLADLLSTRSRETPPPGLSEGAVATLKTLRLGERLSLSGRMGEIAGS
                     GVFDLSRLFGKSDSEHRQFLLAPRFVARIEALVAKKK"
BASE COUNT          553 a         1119 c         1182 g          591 t
ORIGIN      
        1 cgacggcctg cgcaaggctg gcctgccgga ctgatcaggc gccggtgatt tccttcaaca
       61 agccgaagaa ggcgcgcttg cgcctggacg agatggtcca gtcgatcggc agggactgga
      121 atccgtcctc gaagcgctcg cggctcctgc ggtagtcgaa gtagccccag ctcgcgccgc
      181 tctcgacggc ggcgacgaaa tgattgtcgg gcttgtcgaa cgcgaaatgg tcgtcctcgt
      241 tgtagacgat cggctggccg cgataacccg gtgcggcgcg ccagttcgcg acctggaggc
      301 ggatgccgtg cgggctcggc tgcaggggac catcggggcc atggatgcgg ttgccgtgcg
      361 gcagcaggaa atcggccgtc gccaggatgc cggcaggcgg cgcgcccagc gcgagcaggc
      421 tggtgctgac cagcagctgg ccttggctgc gcttgcgggc aagctcgatc aactcgtggc
      481 agcgctgggc ggcgatgatc gggtgggcga acacgccctc caggtcgacc tcgttgccga
      541 tctcgatcag cacgttggtg gcggcgcgtt cgaccagcca gtcgacggtg ttggtgacgg
      601 cggccttcac ggccgcctcg tccttcaagg tgccgctctg cttgccgtag aacaggccca
      661 ggatcaccac catgccgagc cgatcgcagg ccacgatcac cttttccagc cgcgccgccc
      721 aggccggttt cagcacgccg tcggcggtga agccgccgat cctccagggc tgatgccacg
      781 aatagccctg cgggctgccg ccctgcaggt tgaggcagac cgcgagcagg ccgtgcgcgc
      841 gataggtggg cagggcggcg atgaactcgc gcgtattgcg ctcggcatcc cactcgccgt
      901 cggcataggc ccaggcgcca cgggtcgccg ggttctcgtc gtcggcgatg gcgttggcca
      961 tgcggctgtt gaacagcagt ccttcgatgc gatggccctt ccagcggcgc ccggcatagg
     1021 tcggcacgcc attgatcgcg aagccgccgt tggtgatgga cacgacagtg gtcatggcga
     1081 ggactcattg ctaggcgcgc gccactctgt ggcgctcatg ggcgttgtaa tcaacaaaga
     1141 cgcgccacgg agtggcgcgc tcccagcaat gaccatcaga agccgacggc cgcgccgtcg
     1201 cggcggctct cggaggcggc cagatagggc ccgccgtcgg gaaagcgcca gatgatctgg
     1261 ctcgagccga agtcgaagct cggcgatttg gtgcgcgtga tcttgtgacc gcgcgcttcc
     1321 agcccggcaa gcgtcgccgc cggcatgtgc tcctcggccc acaccgtctt gtcgtcttcg
     1381 tggactcgcc aacgcgggcc gtcgatggcg gcctgcgggt tctggccgta gtcgacgatg
     1441 cgcgagaaga gctgcatgtg gccctgcggc tgcatggcgc cgcccatcag gccgaaggtc
     1501 gccaccggct tgccgtcctt ggtgatgaag cccgggatga tggtgtggaa cggccgcttg
     1561 ttcggcccga cctggttggg atggccctcg gtcgtcacga agccggtcgc acgattctgc
     1621 agcgcaatgc cggtgcctgg tacgacgatg cctgagccga agcccctata gttcgactgg
     1681 atcagcgaca ccatcatgcc cgaggcgtcc gctgcgccga gatagatcgt gccgccgtcc
     1741 ttcgggaccc cggggccgaa gtccttggct tttttcggat cgatcagctt ggcgcggctc
     1801 ttgaggtaat gcttgtcgag catctgcgcc ggcgtcacct ccatgaatcg cgggtcggcg
     1861 acgtagcgcc agatgtcggc gaaggcgagc ttcatcgcct cgatgcgcaa atgcgtcacc
     1921 tccggaccgt cgcaatcgtg gccggcgaga tcgaaattct caaggatgcc gagcgccatg
     1981 caggcggcga tgccctggcc gctcggcggg atctcgtgca gcgtcgtgcc gcgataggtg
     2041 agaccgatgg gatcgaccca gtcggccttg tgctgctcga gatccttctt gcgcagcgca
     2101 ccgccggttt cccgggcgta cttgtccatg gcctcggcga gctcgccgcg atagaaggct
     2161 tcgcccttgg tctcggcgat catggtgagc gtcttggcct ggtcggcgaa cctccagatc
     2221 tcgcccggct tgggcggacg gccgccgggc aggaaggctt ttagccagct ctcctggccc
     2281 ttcagccggt cgatggcgcg ctcccactgc cgcgccacca tgtaggagac gcgaaagccg
     2341 tcactggcat acttgatcgc cggctcgaac aggtcggcaa aggcaagctt accgtagcgc
     2401 ttgtgcagct cgacccacaa cgacaccgcg cccggcgtgc tcacgctgcc ccagccgacg
     2461 ctcggcatct tgtcctggcc cttgtactga tcgggcgtca tcagcgccgg cgaatggccc
     2521 gacgcgttca ggccgacgag cttggaacca tcccacagga tgcagaaggc gtcggcgccg
     2581 atgccgttca tggtcggctc gaccacggtg atggcaatgg cgctggcgat cgcggcatcc
     2641 accgcgttgc cgccacgcgc cagcatgcgc aagccggcgg ttgcggcgag gtgctgggaa
     2701 gaggcgacga cgttggcggc gaagaccggc agttttttgg aggggtaggg aaaatcgtaa
     2761 gtgaacgacg gcacgaaagt cctttctatt tcttcttcgc cacaagggct tcgatgcgcg
     2821 ccacgaagcg cggcgccagg aggaactggc ggtgctccga atcgctcttg ccgaacaggc
     2881 gggagaggtc gaacacgccc gaccccgcga tctcgcccat gcggccggag agagacaggc
     2941 gttcgccgag ccgcagggtt tttagcgtcg cgaccgcgcc ctcggaaagc cccggcggcg
     3001 gagtctcgcg cgaacgtgtg gacaacagat cggccagcga gccggcgaag gccagcgccc
     3061 agtcgttgaa ggcgtagagc gaaacctggc ggccgatatc gacggtgatg gcgacggtct
     3121 cggcattgcc ctcgatccgg gtcaaggtgc cgcaccagtc gctgaacgcg ccgacctttt
     3181 cggccagtgc cacgctctgc ttcaccgcct cctcgacctg caatgggttg ttcgacgcga
     3241 gcgcgggctt ggccagcgcg cgcaagccgt cgaggaaggc cttctgcgcc gggttatgct
     3301 cttcgcacgg cgtgtcgaag caaccggcca gcgccaggct cgcgccgccg agcaggatta
     3361 cgcgccgtga tgacgtcatg atctcccgga ccgcgagcgt ctcgctcgct cagaatcatg
     3421 agcgagcggg acgctcgcgg tccag
//
LOCUS       DASWGA010000319        10482 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1177114, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000319 DASWGA010000000
VERSION     DASWGA010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10482
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1177114"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VF991_07690"
     CDS             <1..228
                     /locus_tag="VF991_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556360.1"
                     /translation="PSFGLAPLIVVEIFRIMRRINEEDKVSMLLVEQNAALALDLADN
                     AYVLETGRVVMSGPAAVIKNDENVRKSYLGY"
     gene            239..1144
                     /locus_tag="VF991_07695"
     CDS             239..1144
                     /locus_tag="VF991_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556361.1"
                     /translation="MEQFLQQIASGLANGAIYACVALALVMIYVSTDHINFAQGEMAM
                     FSTYISWQLMSWGMSFWVAFIVAVAFSFVLGVIIERVILRPLHNAPVLSIVVVFIGLL
                     AICNSVAGAIWSYLIKEYPSPFPKSSFGIAGVIGPHQLGVVLVTLVVLGLLFVFFRYT
                     PLGLAMRAAAQNPQMARLVGVRVDWMLALGWGLAAAVGAVAGIMVAHIVYLDPNMMGG
                     ILLYAFASALVGGIGNPGGAVLGGFIVGVLENMVAFAGNQIEKATGVYIIGNGEKLTV
                     ALIIVIFVLTVKPAGLFGRVVVKRV"
     gene            1146..2198
                     /locus_tag="VF991_07700"
     CDS             1146..2198
                     /locus_tag="VF991_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556362.1"
                     /translation="MPAFPKKWLWVLLAAAFLVPLLHPLLPDVVSDYRLFLVSTMIIA
                     AIAVLGLNLLTGFNGQISLGHGAFYAVGAYTAAVLMDHLNMPYWATLPLAAIVCFIVG
                     YLFGLPALKLEGHYLALATFALALAVPQILKYKWLEGLTGGVQGIVLSKPEVPFGLPL
                     TEDQWLYYYCLVVMVLLYWAAANILNSRSGRAMMAIRDQYMAADTMGIDTALYKTVTF
                     GISAAYTGIAGALSASAIAFVAPDSFNFFLSIKFLIGLVVGGIGSLAGSVVGGIFYVL
                     VDNSAQALSTFAKNDLGLQFDLSAYTVFGILLIVLMYLMPMGIVGGVYYLVRSLYSMR
                     KPQAKEQAALKQRVSS"
     gene            2290..3510
                     /locus_tag="VF991_07705"
     CDS             2290..3510
                     /locus_tag="VF991_07705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556363.1"
                     /translation="MKTNRRSFVGGLSAAAVLSGSRAAFAQKKYDDGATDKEIKIGHT
                     NPYSGPASSYGIIGKAEEAYWKSVNDRGGVNGRQIKFITLDDGYSPPKTVEVVRQLVE
                     QDKVLCTFNTLGTPTNTAIHKYMNQKKVPMLFVATGASKWGNPKEFPWTMGYQPDYRT
                     EAVIYAKHILANVKDAKIGVLMQNDDYGKDYWDGFKEGLGKEAGRVAKHVTYEVTDPT
                     VDSQVIQLKDSGANVFFNISIPKFAAQSMRKAADIGWRPAQYLNNVSGQVTTTMKPAG
                     FENVQGVITAAWLKDPTDHQWDGDAEMKTWREWMAKYNPNGNLGDVNYVYAYSVSYLM
                     EQTLKKCGDNLTHENLMRQAANHQKLRVPCLLPGITVSTSPTDFYPVQALQLQRFKGE
                     TWELFGEVMHAESS"
     gene            3729..4901
                     /locus_tag="VF991_07710"
     CDS             3729..4901
                     /locus_tag="VF991_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556364.1"
                     /translation="MLSASGVAFAQKKYDDGATDKEIKVGHTNPYSGPASSYGVIGKG
                     IEAYWKSVNDAGGINGRMVKFITLDDGYSPPKTVEVVRQLVEQEKVLCLFNTLGTPTN
                     TAIHKYMNQKKVPMLFVATGASKWGKPKEFPWTMGFQPDYHTEGAIYAKHMLANVKDA
                     KVAVLMQNDDYGKDYWEGFKEGLGKEAGRIAKHVTYEPTDPTVDSQVIQLKDSGANVF
                     FNISIPKFAAQSIRKAAEIGWKPVHYLNNVSASVASVMKPAGYDNSQGIMTAAYLKDP
                     TDKQWDNDDEMKAWRAWMAKYMAGANPTDANYIYAFAVSFLMHQTLKKCGDNLTRENV
                     MRQAANHQKLRVPLLLPGITVNTSPTDYYPVQSVQLQRFKAETWELFGDIMSAESS"
     gene            complement(4962..5444)
                     /locus_tag="VF991_07715"
     CDS             complement(4962..5444)
                     /locus_tag="VF991_07715"
                     /inference="COORDINATES: protein motif:HMM:NF024890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HEX9556365.1"
                     /translation="MLKFRSLSAATLLLIAGPALAAPDDLPTPAEKSARPSTSVPRGL
                     MRYDTNKDGFVDRAEWKAAQEARFKRLDVNGDGKLTQDELFARTPAVGNSVLPTDRQA
                     QRQSSYFQLLDTDKDGVVTLAEFMAQAERNFARCDLNKDGRIDTAECRQALQRPRAER
                     "
     gene            5582..6970
                     /gene="gor"
                     /locus_tag="VF991_07720"
     CDS             5582..6970
                     /gene="gor"
                     /locus_tag="VF991_07720"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004362 - glutathione-disulfide reductase
                     (NADP) activity [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HEX9556366.1"
                     /translation="MPYDYDLFVIGAGSGGVRASRIAAGHGARVGICEDYRVGGTCVI
                     RGCVPKKLLVYGSKFAHEFEDAAAYGWAVGTPVHSWATLRDNVQKEVDRLNGVYLRLL
                     EGAGVKLHMGRGRLMDRHTIQVGEETITADKILVATGGHPVVPDIPGKEFAITSNEAF
                     HLPDPLPKRITIVGGGYIAVEFAGIFHGLGCHVDLVLRRDRVLRGFDEECRTAVHEAL
                     RDSGIRMRTEMQIGRIEATNGKAPFTVHTPLGGMFETDLVMYATGRTANTSGIGLEKA
                     GVQLDKAGAVAVDEWSKTTATNIWAVGDVTDRINLTPVAIMEGHCFADTEFGKRPRKP
                     DHRDVPSAVFCQPELANVGLTEEEATLTLGEIHVFTAAFRPMKYTVSGRHQRTFMKLI
                     VEAATDKVVGVHMVGDDAAELIQGLAVAVKAGATKAQFDATVGIHPTAGEEFVTMRTA
                     RVEPAPSRKAAE"
     gene            7066..8502
                     /locus_tag="VF991_07725"
     CDS             7066..8502
                     /locus_tag="VF991_07725"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HEX9556367.1"
                     /translation="MTAIQGPSKTGAKAQSRSSSAADWTPTSWRGRPAQQMPVYPDAT
                     LLAGAEARLRRYPPLVFAGEARKLKAALAKIAAGEAFLLQGGDCAESFVDFTANNIRD
                     TFRVLLQMAVVLTYGAGVPVVKVGRMAGQFAKPRSSNVEKIDGVELPSYRGDNVNGFE
                     FSAEARRPDPERMVQAYNQSAATLNLLRAFAQGGYADLHEVNRWNLDFVRNSPASERY
                     HDLAARLDETLNFMAACGLNSATTPQIAETDFFTSHEALLLPYEEALTRVDSTSGDWY
                     DCSAHLVWIGDRTRQPDGAHVEFLRGVRNPLGLKAGPSLSTDDLLRLLDTLNPANEPG
                     RIVIICRMGADKVLDKLPALVRAVKRAGRSVVWSCDPMHGNTVTAANGRKTRHFDAIL
                     SEVKDFFAVHRAEGSHPGGVHVEMTGQEVTECVGGAVDITVDNLAERYETQCDPRLNA
                     SQALELAFLLAEQLKAERLSVARARPAV"
     gene            8544..9692
                     /locus_tag="VF991_07730"
     CDS             8544..9692
                     /locus_tag="VF991_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556368.1"
                     /translation="MTHPDNGEIERFTDHYFNRTKQVIGRFGDSRVTYAIFMRRPVVF
                     APRLALEWLEELGRSRNTSVELDLRYAEGKWVGAGEPMMYITGSFFHLVDLETIFLQK
                     LGPACVAAYNAWTMCADLPKTAFLAMDARHCAGQEMAEMMAYAASVGSARAKRKVGAV
                     GFIGNATHATAHFFGRDQGLGTMPHALVGYAQSTLRAAEMYHETFPGESMTVLVDYFA
                     REISDSLEVCRRFPELAAKGMLSLRVDTTGGRYIEGLDPASSYAVLERFSPESIRGYR
                     SEEELRYLVGTGVSAAAIFHLRAELDRAGFDKVRIVASSGFSPAKCRVMAEAKAPIDV
                     VGSGSFLPLNWTETYATADIVEYDGEKRVKIGREFLHRGRPNGSGRPL"
     gene            complement(9843..10238)
                     /locus_tag="VF991_07735"
     CDS             complement(9843..10238)
                     /locus_tag="VF991_07735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556369.1"
                     /translation="MSTFNRTTLVKVLEILDSSHAGEALAAAKLASTMVREAGLTWND
                     VLAPEIEGRAGREQAIAARAVGAGPFGYRRDRELSPHEQFFMVLLSPRTPTEIKRKLR
                     SWEARVLDGEITPQETQDLRFMYQSFVVG"
BASE COUNT         1878 a         3424 c         3346 g         1834 t
ORIGIN      
        1 ccgtcgttcg gcctggcgcc gctgatcgtg gtcgagatct tccgcatcat gcggcgcatc
       61 aacgaagagg acaaggtgag catgctgctg gtcgagcaga atgccgccct cgccctcgac
      121 ctcgccgaca acgcctacgt gctggaaacc ggcagggtcg tgatgtcggg ccccgcggcg
      181 gtcatcaaga acgacgagaa cgtccgcaag tcctatctcg gctactgagg cagagaagat
      241 ggaacagttt ctccagcaga tcgcttccgg cctcgccaac ggcgccatct atgcctgcgt
      301 ggcgttggcg ctggtcatga tctacgtgtc gaccgaccac atcaatttcg cccagggcga
      361 gatggcgatg ttctcgacct acatcagctg gcagctgatg agctggggca tgagcttctg
      421 ggtggcgttc atcgtcgcgg tggcgttctc cttcgtgctc ggcgtgatca tcgagcgggt
      481 gatcctccga ccgctgcaca acgcgccggt gctgtcgatc gtcgtggtct tcatcggcct
      541 gctggcgatc tgcaactcgg tggccggcgc gatctggagc tacctgatca aggaatatcc
      601 ttcgccgttc cccaagagca gcttcggcat cgccggcgtc atcgggccgc atcagctggg
      661 cgtcgttctt gtcaccctgg tcgtgctcgg cctgttgttc gtgttcttcc gctatacgcc
      721 gctcgggctt gccatgcgcg cggcggcgca gaacccgcag atggcccgcc tggtcggcgt
      781 gcgggtcgac tggatgctgg cgctgggctg ggggctcgcc gccgcggtcg gcgcggtggc
      841 cggcatcatg gtcgcccaca tcgtctatct cgatcccaac atgatgggtg gcatcctgct
      901 ctacgccttc gccagcgccc tggtcggcgg catcggcaac ccgggcggcg cggtgctcgg
      961 cggcttcatc gtcggcgtgc tcgagaacat ggtggccttc gccggcaacc agatcgagaa
     1021 ggcgacgggt gtctacatca tcggtaacgg cgagaagctc accgtcgcgc tgatcatcgt
     1081 gatcttcgtg ctcaccgtga agccggccgg cctgttcggc cgcgtcgtcg tcaagagggt
     1141 ctgacatgcc ggcatttccc aagaaatggc tgtgggtcct gctggcggcg gcgttcctgg
     1201 tgccgctgct gcacccgttg ctgcccgacg tcgtctcgga ctatcgcctg ttcctggtca
     1261 gcacgatgat catcgcagcg atcgccgtgc tgggattgaa cctgctgacc ggcttcaacg
     1321 gccagatctc gctcggccac ggcgcgttct acgcggtcgg tgcctacacg gcggcggtcc
     1381 tgatggacca tctcaacatg ccgtactggg cgaccctgcc gttggcggcg atcgtctgct
     1441 tcatcgtcgg ctacctgttc ggcctgccgg cgctcaagct cgagggccac tatctggcct
     1501 tggcgacctt cgcgctggcg ctcgcggtgc cacagatcct gaaatacaaa tggctcgagg
     1561 gcctcaccgg cggcgtgcag ggcatcgtgc tgtcgaagcc cgaggtgccg ttcggcctgc
     1621 cgctgaccga ggaccagtgg ctctactatt actgcctggt cgtcatggtg ctgctgtact
     1681 gggcggcggc caacatcctg aacagccgca gcgggcgcgc catgatggcg atccgcgacc
     1741 agtacatggc ggccgacacc atgggcatcg acaccgccct ctacaagacg gtgaccttcg
     1801 gcatcagcgc ggcctacacc ggcatcgccg gcgcgctctc ggcctcggcc atcgccttcg
     1861 tggcgcccga cagcttcaac ttcttcctgt cgatcaagtt cctgatcggc ctggtggtgg
     1921 gcggcatcgg ctcgctggcc ggctcggtcg tcggcggcat cttctatgtg ctggtcgaca
     1981 actccgccca ggcgctgtcg accttcgcca agaacgatct cggcctgcag ttcgacctgt
     2041 cggcctacac cgtgttcggt atcctgctga tcgtgctcat gtacctgatg ccgatgggca
     2101 tcgtcggcgg cgtctattac ctggtgcgca gcttgtacag catgcgcaag ccgcaggcaa
     2161 aagagcaggc ggcgctcaaa caacgcgtga gcagctgaca gcggcctgca cggcaggatg
     2221 caagagacca gccgtttgaa tagcgagtga ggaatagtcg atggcgtaaa cccaacaggg
     2281 agaattacca tgaagacgaa caggcgtagc ttcgtgggcg gcctttccgc cgccgcagtg
     2341 ctttcgggtt cccgagctgc gttcgcacaa aagaagtacg acgacggcgc gaccgacaag
     2401 gagatcaaga tcggtcacac caatccctat agcgggccgg cgtcttcata cggaatcatc
     2461 ggcaaagccg aagaggctta ctggaagagc gtcaatgacc gcggtggcgt caatggccgc
     2521 cagatcaagt tcatcacgct cgacgacggc tattcgccgc ccaagaccgt cgaggtcgtc
     2581 cgccagctgg tcgagcagga caaggttctg tgcaccttca atacgctcgg cacgccgacc
     2641 aatacggcga tccacaagta catgaaccag aagaaggtgc cgatgctgtt cgtcgccacc
     2701 ggcgcctcga agtggggcaa tcccaaggag ttcccgtgga cgatgggcta ccagcccgac
     2761 taccgcaccg aagcggtgat ctacgccaag cacatcctgg ccaacgtcaa ggacgccaag
     2821 atcggtgtgc tgatgcagaa cgacgattac ggcaaggact actgggacgg cttcaaggag
     2881 ggtctcggca aggaggccgg ccgggtcgcc aagcacgtca cctacgaggt gaccgatccg
     2941 acggtcgaca gccaggtgat ccagctcaag gattcaggag ccaacgtctt cttcaacatc
     3001 tcgatcccca agttcgccgc ccagtcgatg cgcaaggcgg ccgacatcgg ttggcgcccg
     3061 gcgcagtacc tgaacaacgt ctcggggcag gtgacgacca cgatgaagcc ggcgggcttc
     3121 gagaacgtgc agggagtcat caccgcggcc tggctcaagg acccgaccga ccatcagtgg
     3181 gatggcgatg ccgagatgaa gacctggcgg gaatggatgg ccaagtacaa tcccaacggc
     3241 aatctcggcg acgtcaatta cgtctacgcc tactcggtgt cgtacctgat ggagcagacg
     3301 ctgaagaagt gcggcgacaa cctcacgcac gagaatctga tgcgtcaggc tgcaaatcat
     3361 cagaagttgc gcgtgccgtg tttgttgccc ggcatcacgg tcagcaccag cccgaccgat
     3421 ttctatccgg tccaggcctt acagttgcag cgcttcaagg gcgagacctg ggagctgttc
     3481 ggcgaggtca tgcacgccga aagcagctag aggcaaacat aaccgaagtg cggaaggccg
     3541 ccgccaggcg gccttttctt cgggcacttt cgcgatgtaa cattgaaaac ttgtatagtg
     3601 ctgagcggct ttttctcttt tcacgcaccg tgattcgggc gactcttgtt cagcataaca
     3661 ataaactgca ggagggcgcg ttgaagacca ataggcgtag tttcttgggt ggcgtgtcga
     3721 ctgccgcagt gttgtcagca tccggcgtgg cgtttgccca gaagaagtac gacgacggag
     3781 cgaccgacaa ggaaatcaag gtcggtcaca ccaaccccta cagcggaccg gcgtcgtcgt
     3841 acggcgtgat cggcaagggc atcgaggcct actggaagag cgtcaacgac gccggcggca
     3901 tcaacggccg catggtgaag ttcatcaccc tggacgacgg ctactcgccg cccaagacgg
     3961 tcgaggtggt gcgccagctc gtcgagcagg aaaaggtgct ttgcctgttc aacacgctcg
     4021 gcacgccgac caacacggcg atccacaaat atatgaacca gaagaaggtg ccgatgctgt
     4081 tcgtcgccac cggcgcctcg aagtggggca agcccaagga gttcccgtgg acgatgggct
     4141 tccagcccga ctaccacacc gagggcgcca tctacgccaa gcacatgctg gccaacgtca
     4201 aggacgccaa ggtggccgtg ctgatgcaga acgacgacta cggcaaggat tactgggaag
     4261 gcttcaagga gggcctcggc aaggaggccg gccgcatcgc caagcacgtg acctacgagc
     4321 cgaccgatcc aacggtcgac agccaggtca tccagctcaa ggactccggg gccaacgtgt
     4381 tcttcaacat ctcgatcccg aagttcgcgg cgcagtcgat ccgcaaggcg gcggagatcg
     4441 gctggaagcc ggtccattac ctgaacaacg tctcggcctc ggtcgcgtcg gtgatgaagc
     4501 ccgccggcta cgacaacagc cagggcatca tgaccgcggc ctacctcaag gaccccaccg
     4561 acaagcagtg ggacaacgac gacgagatga aggcctggcg ggcgtggatg gccaaataca
     4621 tggcgggggc aaacccaacc gatgccaact acatctacgc ctttgccgtg tcgttcctga
     4681 tgcaccagac gctgaagaag tgcggtgaca acctgacgcg cgagaacgtc atgcgccagg
     4741 cggccaacca ccagaagctg cgcgtgccgc tcctgctgcc gggtatcacc gtcaacacca
     4801 gcccgaccga ctattatccg gtccagtcgg tccagcttca gcgcttcaag gctgaaacct
     4861 gggagctgtt cggcgacatc atgtcggccg aaagctcctg atcgccgcgc accacgaaga
     4921 cgagaaggcc gccggtttcc ggcggccttt ctgtttggat gtcagcgctc ggcccgcggg
     4981 cgctgcagcg cctggcggca ctcggcggtg tcgatgcggc catccttgtt gagatcgcag
     5041 cgcgcgaagt tgcgctctgc ctgggccatg aattcggcca aggtcaccac gccgtccttg
     5101 tcggtgtcga gcaactggaa gtagctcgac tggcgctggg cctgacgatc cgtcggcagc
     5161 acgctgttgc cgacggcggg cgtgcgggcg aacagctcgt cctgggtgag cttgccgtcg
     5221 ccgttgacgt cgagccgctt gaagcgggct tcctgcgcgg ccttccattc ggcgcgatcg
     5281 acgaagccat ccttgttggt gtcgtatcgc atcaggcccc ttggaacgct ggtcgaggga
     5341 cgggcagact tttcagccgg cgtcggcagg tcatcgggcg cggccagggc gggaccggcg
     5401 atcagcagca gcgtggcggc agacagcgag cggaatttca gcattgggac atatccttaa
     5461 aattgtatca ggaaacggaa atacacgccc catttccctt acccggccgt ctaagcgccg
     5521 atatagtttg cggcgggacc gaaatgcggc cgtgttgtgg ttttgttctc aggttatcca
     5581 catgccctac gactacgacc ttttcgtcat cggcgccggc tcgggcggcg tgcgcgcctc
     5641 gcgcatcgcc gccggccacg gcgcgcgcgt cggcatctgc gaggactacc gggtcggcgg
     5701 cacctgcgtg atccgcggtt gcgtgcctaa gaagctcttg gtctacggct ccaagttcgc
     5761 gcacgaattc gaggacgccg cggcctatgg ctgggccgtc ggcacacctg tccattcctg
     5821 ggcgaccctg cgcgacaacg tgcagaaaga agtcgatcgc ttgaacggcg tctacctgcg
     5881 gctgctcgaa ggcgcgggcg tcaagctgca catgggccgc ggccggctga tggaccgcca
     5941 cacgatccag gtcggcgagg agacgatcac ggcggacaag atcctggtcg cgaccggcgg
     6001 ccatcctgtg gtgccggaca ttcccggcaa ggaattcgcc atcacctcca acgaggcgtt
     6061 ccatctgccc gatccgctgc ccaagcgcat cacgatcgtg ggcggcggct atatcgccgt
     6121 cgagttcgcc ggaatcttcc atggcctggg ctgccatgtc gacctggtgc tgcgtcgcga
     6181 ccgcgtgctg cgcggctttg acgaggagtg ccgcacggcg gtgcacgaag cgctccgcga
     6241 cagcggcatc aggatgcgca ccgagatgca gatcggccgc atcgaggcca cgaatggcaa
     6301 ggcgccgttc actgtacaca cgccgctcgg cggcatgttc gagaccgacc tcgtgatgta
     6361 cgccaccggc cgcacggcca acacgtcggg cattggcctc gagaaagcgg gcgtgcagct
     6421 cgacaaggcc ggcgccgtcg ccgtcgacga atggtcaaag acgacggcaa ccaacatctg
     6481 ggcggtgggc gacgtcaccg accgaatcaa cctcacgccg gtcgccatca tggagggcca
     6541 ctgctttgcc gacaccgagt tcggcaagcg gccgcgcaag cccgaccatc gcgacgtgcc
     6601 gtcggcggtg ttctgccagc ccgagctcgc aaatgtcggc ctgaccgagg aggaggcgac
     6661 gctcaccctg ggcgagatcc acgtcttcac cgcggcgttc cggccgatga agtacaccgt
     6721 gtcgggccgc caccagcgca ccttcatgaa gctgatcgtc gaggccgcga ccgacaaggt
     6781 ggtcggcgtg cacatggtgg gcgacgatgc cgccgagctg atccagggcc ttgccgtcgc
     6841 cgtgaaggcc ggcgccacca aggcccagtt cgacgccacc gtgggcatcc atcccacggc
     6901 cggcgaagag ttcgtcacca tgcgcacggc gcgggtcgaa ccggcgccgt cgcgcaaggc
     6961 cgccgagtaa gccgcccgct ggccttttat ccacagcacg tatagtttca ccaccccgac
     7021 ggccgggcgg cccgtaaccg ccggatcggg cagcaggagg agaagatgac cgcgattcag
     7081 ggcccgtcca agacgggcgc caaagcgcag tcccgcagtt cgagcgccgc cgactggacg
     7141 cccaccagct ggcgcggccg gccggcccag cagatgccgg tctatcccga cgccaccctt
     7201 ctggccggcg ccgaggcgcg gctgcgccgc tatccgccgc tggtctttgc cggcgaggcg
     7261 cgcaagctca aggcggcgct ggccaagatc gcggccggcg aggccttcct gctgcaaggc
     7321 ggcgactgcg ccgagagctt cgtcgacttc accgccaaca acatccgcga caccttccgc
     7381 gtgctcctgc agatggcggt cgtgctgacc tacggcgccg gcgtgccggt ggtgaaggtc
     7441 ggccgcatgg ccggccagtt cgccaagccg cgctcgtcca acgtcgagaa gatcgacggc
     7501 gtcgagctgc cgtcctaccg cggcgacaac gtcaacggct tcgagttcag cgccgaggcg
     7561 cgccggcccg atccggagcg catggtgcag gcctacaacc agtcggccgc gacgctcaac
     7621 ctgctgcgcg ctttcgccca gggcggctat gccgacctgc acgaggtcaa ccgctggaac
     7681 ctcgatttcg tgcgcaactc gccggcctcg gagcgctatc acgaccttgc cgcgcggctc
     7741 gacgagacgc tgaatttcat ggcggcgtgc gggctcaatt cggcgaccac gccacagatc
     7801 gccgagaccg acttcttcac cagccacgag gcattgctgc taccctacga ggaggcgctg
     7861 actcgcgtcg attcgacctc gggcgactgg tacgactgtt cggcccactt ggtgtggatc
     7921 ggcgatcgca cccgccaacc cgatggggcg catgtcgagt tcctgcgcgg cgtgcgcaat
     7981 ccgctgggcc tcaaggccgg tccctcgctc tcgaccgacg atctgttgcg cctgctcgac
     8041 acgctgaacc cggccaacga gcccggccgc atcgtcatca tctgccgcat gggcgccgac
     8101 aaggttttag acaagctgcc ggcgctggtc cgtgcggtga agcgcgccgg ccgctcggtc
     8161 gtgtggtcgt gcgatccgat gcacggcaac accgtgaccg cggccaacgg ccggaagacc
     8221 cgccacttcg acgccatcct gagcgaggtg aaggacttct tcgccgtcca tcgcgccgag
     8281 ggcagccatc ccggcggcgt gcatgtcgag atgaccggcc aggaagtgac cgaatgcgtc
     8341 ggcggcgccg tcgacatcac cgtcgacaac ctcgccgagc gctacgagac gcagtgcgat
     8401 cccaggctca acgccagcca ggcgctcgag ctggcgttcc tgctcgccga gcagctcaag
     8461 gccgagcgcc tgtcggtcgc ccgggcgcgc ccggcagtct aagccatgcc gtgctcgatg
     8521 gaaccgttgg aaagagatgc ctcatgacgc atccagacaa cggcgagata gagcgtttca
     8581 ccgatcatta cttcaatcgc accaagcagg tgatcggccg cttcggcgac agccgcgtga
     8641 cctacgcgat tttcatgcgc cgtcccgtgg tgttcgcgcc gcgcttggcg ctggagtggc
     8701 tggaggaatt gggccgctcg cgcaacacct cagtcgagct cgacctgcgc tacgccgagg
     8761 gcaaatgggt cggcgccggc gagccgatga tgtacatcac cggctcgttc ttccatctgg
     8821 tcgacctgga aaccatcttc ctgcagaagc tggggccggc ctgtgtcgcc gcctacaatg
     8881 cctggacgat gtgcgccgat ctgcccaaga cggcatttct cgccatggat gcgcgtcact
     8941 gcgcgggcca ggagatggcc gagatgatgg cctacgccgc ctcggtcggc tcggcgcgcg
     9001 ccaagcgcaa ggtgggcgcg gtgggcttca tcggcaacgc cacccacgcc accgcgcact
     9061 tcttcggccg cgaccagggg ctcggcacca tgccgcacgc tctggtcggc tacgcccaat
     9121 cgacgctgcg cgccgccgag atgtaccacg agacctttcc cggcgagtcg atgaccgtgc
     9181 tggtcgacta cttcgcccgc gagatctccg attcgctgga agtctgccgg cgctttcccg
     9241 agcttgccgc caaggggatg ctgtcgctgc gcgtcgacac gaccggcggc cgctatatcg
     9301 aagggctcga tccggcgtcg tcctacgccg tgctggagcg cttctcgccc gaatcgatcc
     9361 gcggctatcg cagcgaagag gagttgcgct acctcgtcgg caccggcgtg tcggcggcgg
     9421 cgatcttcca tttgcgcgcc gagctcgatc gcgcgggctt cgacaaggtg cggatcgtgg
     9481 cttcgtccgg cttcagcccg gccaagtgcc gggtcatggc cgaagccaag gcgccgatcg
     9541 atgttgtcgg ctcgggctcg ttcctgccgt tgaactggac cgagacctac gccaccgccg
     9601 acatcgtcga gtacgacggc gagaagcggg tcaagatcgg ccgcgagttt ttacaccgcg
     9661 gccgccccaa cggcagcggc cggccgctat agatttctgt cgtctcgcgc ggggtcaccc
     9721 ccgcgctgga gcgaagcgaa ggacctcatc gccgcttgcc acggcatgag atccttcgct
     9781 gcgctcagga tgacaccgaa cctcgacggc gaacgatttc atgctatcgg aagtcgctgc
     9841 agctatccga cgacgaagct ctggtacatg aagcgcaggt cctgcgtctc ctgtggcgtg
     9901 atctcgccgt cgagcacgcg cgcttcccag gagcgcagct tgcgcttgat ctcggtcggc
     9961 gtgcgcgggc tcagcagcac catgaagaac tgctcgtgcg gcgagagctc gcggtcgcga
    10021 cggtagccga acgggccggc cccgacggcg cgggctgcaa tggcctgttc gcggccggcg
    10081 cggccttcga tctcgggcgc caggacgtcg ttccaggtga ggccggcttc gcgcaccatc
    10141 gtcgaggcga gcttggcagc cgccagcgct tcgccggcgt ggctgctgtc gaggatttcc
    10201 aggaccttca ccagggtggt gcggttgaat gtcgacatcg tcttccgctc cgcaccgccg
    10261 cgcatccgag gggtcggatg acgcagcctg tgtctttgac tattggatga gcaagcggca
    10321 ctaactcctt acaagatata gatccttcag cccccattca agacggtccc ttgaccggta
    10381 gtgtcctaat ttgaggggga cctagctcct cacgcatcga aaggtcgcaa ccgatcgatc
    10441 aatgtttacc cttgtgttgc tgaccatcac ggcgtgcctt cc
//
LOCUS       DASWGA010000320         2056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_41931, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000320 DASWGA010000000
VERSION     DASWGA010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41931"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VF991_07740"
     CDS             complement(<1..549)
                     /locus_tag="VF991_07740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HEX9556370.1"
                     /translation="MSDTAQILRAFDEAPPTRVRDPSRVRDYVDLLKPRVMSLVVFTG
                     LVGVLIAPGHLHPFAAALAVLAIALGSGAAGAINMWYERDLDALMTRTANRPLPAGRV
                     APDDALALGVLLSIFSVLLMAVSTNYVAAALLAVAILFYVFVYTIWLKRRTPQNIVIG
                     GAAGAFPPLVGWAAVTGDLSPLA"
     gene            complement(612..>2056)
                     /locus_tag="VF991_07745"
     CDS             complement(612..>2056)
                     /locus_tag="VF991_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 1"
                     /protein_id="HEX9556371.1"
                     /translation="PGVQYFNAADGTPNGHLWNTVVTAHGLIMVFFVVMPALIGGFGN
                     WFVPLMIGAPDMAFPRMNNISFWLLPPAFILLLASAAIGGGVGTGWTIYPPLTVQQGA
                     GMDLAIFSLHLAGASSILGAINFITTIFNMRAPGMTLHRMPLFAWSILVTAFLLLLAL
                     PVLAGAITMLLTDRNFGTHFFDPAGGGDPTLFLHLFWFFGHPEVYIMILPAFGIVSHI
                     VSTFSRKPIFGYLGMAYAMVAIGVVGFVVWAHHMFTVGMDVDTRAYFVAATMVIAVPT
                     GVKIFSWIATMWGGSIKLEVPMLWAIGFIFLFTVGGVTGVVLANAGVDYALHNTYYVI
                     AHFHYVLSLGAVFGMFAGFYYWFGKMCGRQYPEWAGQIHFWTTFIGVNLTFFPMHFSG
                     LAGMPRHYVDYPDAMSHWNYISSIGAFISFGSTIFWLIFVVLGTLLAGRRVSANYWGE
                     GATTLEWTVPSPPPFHTFEELPHISPAAHH"
BASE COUNT          417 a          639 c          718 g          282 t
ORIGIN      
        1 cgccagcggg ctcaggtccc cggtcaccgc cgcccacccc accagcggcg ggaaggcgcc
       61 ggcggcgccg ccgatcacga tgttctgcgg cgtgcggcgc ttcagccaga tcgtgtagac
      121 gaacacatag aacaggatcg cgacagcgag cagcgcggcc gcgacgtagt tggtcgatac
      181 cgccatcagc aggaccgaga agatcgacag cagcacgccc aaagccagcg catcgtccgg
      241 cgccacgcgg ccggccggca gcggccggtt ggcggtgcgt gtcatcaggg cgtcgagatc
      301 gcgctcgtac cacatgttga tggcgccggc ggcgcccgag cccagcgcaa ttgccagcac
      361 ggcgagcgcg gcggcgaacg gatgcaggtg ccctggcgcg atcagtacgc cgaccaggcc
      421 ggtgaacacc accagcgaca tgacgcgggg cttcagcaag tcaacgtagt cgcgtacacg
      481 cgacgggtcg cgcacgcgcg tcggcggcgc ttcgtcgaat gccctcagga tctgtgccgt
      541 atcgctcatc gccttttgcg gcgaaggcgc cagccctatt tgattttagg gggcgcctcc
      601 gctccttgag atcagtggtg tgccgccgga gagatgtgcg gcagctcctc gaacgtatgg
      661 aacggcggcg gcgacggcac cgtccattcc agcgtcgtgg cgccctcgcc ccagtagttg
      721 gcgctgaccc gccggccggc cagcagcgtg ccgagcacga cgaagatcag ccagaagatg
      781 gtcgagccga acgagatgaa cgcgccgatc gaagagatat agttccagtg cgacatcgcg
      841 tcgggatagt cgacgtagtg gcgcggcatg ccggcgagcc cgctgaagtg catggggaag
      901 aaggtcaggt tgacgccgat gaaggtcgtc cagaagtgga tctggccggc ccactcggga
      961 tactgccggc cgcacatctt gccgaaccag tagtagaagc ccgcgaacat gccgaacacc
     1021 gcgccgagcg acagcacgta gtggaagtgc gcgatcacgt agtaggtgtt gtgcagcgcg
     1081 taatcgacgc cggcattggc cagcaccacg ccggtgacgc cgcccaccgt gaacaggaag
     1141 atgaagccga tcgcccacag catcggcacc tcgagcttga tcgagccgcc ccacatggtg
     1201 gcgatccagc tgaaaatctt cacgccggtc ggcaccgcga tcaccatggt ggcggcgacg
     1261 aaataggcgc gcgtgtcgac atccatgccg acggtgaaca tgtgatgcgc ccacaccacg
     1321 aagccgacga cgccgatcgc caccatcgca taggccatgc cgagatagcc gaagatcggc
     1381 ttcctggaga aggtcgagac gatatggctg acgatgccga aggccggcag gatcatgatg
     1441 tacacctcgg gatggccgaa gaaccagaag aggtgcagga acagggtggg atcgccgccg
     1501 cccgccggat cgaagaagtg cgtgccgaag ttgcggtcgg tcagcagcat ggtgatggcg
     1561 ccggccagca ccggcagggc gagcagcagc aggaaggccg tgaccaggat cgaccaggcg
     1621 aacaatggca tgcggtggag cgtcatgccc ggcgcgcgca tgttgaagat cgtggtgatg
     1681 aagttgatgg cgcccaggat cgacgaggcg ccggcaaggt gcagcgagaa gatggcgagg
     1741 tccatgcccg cgccctgctg cacggtgagc ggcggataga tcgtccagcc ggtgccgacg
     1801 ccgccgccga tcgcggccga ggccagcagc aggatgaagg ccggcggcag cagccagaag
     1861 ctgatgttgt tcatgcgcgg gaaggccatg tcgggcgcgc cgatcatcag cggcacgaac
     1921 cagttgccga agccgccgat cagcgccggc atgacgacga agaagaccat gatcaggccg
     1981 tgcgcggtga cgacggtgtt ccacagatgg ccgttgggcg tgccgtccgc ggcgttgaag
     2041 tactgcacgc cgggct
//
LOCUS       DASWGA010000321         4284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2319558, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000321 DASWGA010000000
VERSION     DASWGA010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4284
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2319558"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..257)
                     /locus_tag="VF991_07750"
     CDS             complement(<1..257)
                     /locus_tag="VF991_07750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9556372.1"
                     /translation="MKLYSLKNGVNPRRVRIFLAEKRVAIPIEEFDMESAGHKAPAFL
                     AKNPLGMLPVLELDDGTLIAESVAICRYFEESIPEPPLFGRS"
     gene            complement(259..1248)
                     /locus_tag="VF991_07755"
     CDS             complement(259..1248)
                     /locus_tag="VF991_07755"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9556373.1"
                     /translation="MRSSLTRRRALAAAGAATATLAAPALAQAPWPNKPVRFIVPFPP
                     GQAADIFARLMAEKLTEVWKQQVIVENKAGGSGIPATEYGKAAAPDGYTLMVVSSGTF
                     GVNPSLFPDLPYKPLVDFLPISNIFLVPLVIVAHPSFPANTLAELVELARKDPGTYSY
                     ASAGPGTAQHLSMELFKLRATLDIVHVPYKGSGPAMADLLGGHVKLMMDSAASALGAI
                     VDGRIKAFAVTTARRAAPPLDNIPPIADTLPGFDAAGWSGLAAPARTPLEIVAKVNKD
                     LQALLKDPAVVRQIEQRAGMPAPGSPIQFAEFIKKEIDTWGEVVRATGAKPGT"
     gene            1503..1979
                     /locus_tag="VF991_07760"
     CDS             1503..1979
                     /locus_tag="VF991_07760"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX9556374.1"
                     /translation="MSDRYYEDFKVGDRFVSGGLTMTEAGIIDFARQWDPQPFHIDVE
                     FAKKWSFDGLIASGLHTMAVTLKLWLEQGVFRVCSLGSPGIGEVQFPRPVRPADTLRV
                     VTDIVELRLSSSKPDRGIARIRQVTINQRGEQVMEQETTVFLKRRPVLAANFSARS"
     gene            complement(1989..2633)
                     /locus_tag="VF991_07765"
     CDS             complement(1989..2633)
                     /locus_tag="VF991_07765"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEX9556375.1"
                     /translation="MTSFRFDDALRAAIAGRLGRFELRRHADTGGLKRAAVAVVVVEA
                     ETPSPSGEHEAAFLLTRRMPRLRSHGGQWALPGGRVDPGETIEQTALRELHEELGVLA
                     STDDILGTLDDYPTRSGYLIAPVVVWAAGVTVTPNPAEVAAAYRIACGELFRDGSPEI
                     IAIEESDRPIIRLPLPVANVNAPTAAVLYQFREVALAGRDTRVDHFEQPVFAWR"
     gene            complement(2630..3229)
                     /locus_tag="VF991_07770"
     CDS             complement(2630..3229)
                     /locus_tag="VF991_07770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid methyltransferase"
                     /protein_id="HEX9556376.1"
                     /translation="MPSLDHAGTTLFLKRWLRRPFAMGAVVPSGRLLAEAMAETTKAA
                     LAGRPGHVVELGAGTGEVTKALLAAGLAPERLALVERDPELARFLRRHFPGPRIIEGD
                     AARLPRLLAEHEVAPVAAVVSSLPLLSLPAGIVQSIVGGVFEALPRGGALVQFTYGPT
                     PPVPRAVRERLHLDGAHGKRIWRNVPPAVVWTFTRPPAA"
     gene            complement(3283..>4284)
                     /locus_tag="VF991_07775"
     CDS             complement(3283..>4284)
                     /locus_tag="VF991_07775"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9556377.1"
                     /translation="WRGDRFKEMLNWEYSGFFDIGMCLRNEYDAIIQHGTMTLVRRDL
                     MEELGGWATWCITEDTELGLRLMERGYGAMYSRERFGHGLTPDHFAGYKKQRFRWAYG
                     AMQIMKAHAGKMFSNTTKLTFWQKYHFVAGWLPWFADALNLVFTWAGLGWLLAVLLPP
                     LFGIKPVGLPPAEFIVPTIGIFVFKLLYSFGLYFDRVRCTFRQSVGASLAGLALTYTV
                     GRAVIYGLATSRLPFMRTPKMDERATLGMALGMARGEAILAVLLWLGAAVLWLRNGQL
                     DPEARLWAAFMVVQSLPYAAAVYVSIVNALEQMRHARAIFEAAPSPRMAAPAMQPAQ"
BASE COUNT          722 a         1447 c         1475 g          640 t
ORIGIN      
        1 gagcggccga acaatggcgg ctcgggaatc gactcctcga agtagcggca gatcgccacc
       61 gattcggcga tcagcgtgcc gtcgtcgagc tcgagcaccg gcagcatacc cagcggattc
      121 ttggcgagaa acgccggcgc cttgtggccc gcgctctcca tgtcgaattc ctcgatcggg
      181 atggcaacgc gcttctcggc cagaaagatg cgcacgcggc gcggattgac gccgttcttg
      241 agactgtaga gcttcacctc aggtgcccgg cttggcgccg gtcgcccgca ccacctcgcc
      301 ccaggtgtcg atctctttct tgatgaactc ggcgaactgg atgggcgagc cgggcgccgg
      361 catgccggcg cgctgctcga tctggcggac caccgccgga tccttgagca gcgcctgcag
      421 gtccttgttc accttggcca cgatctcgag cggcgtgcgt gccggcgcgg caaggcccga
      481 ccagccggcg gcatcgaagc ccggcagcgt gtcggcgatc ggcgggatat tgtcgagcgg
      541 cggggcggcg cgacgcgccg tggtgacggc gaatgccttg atgcgaccgt cgacaatggc
      601 gcccagggcg gacgcggcgc tatccatcat cagcttgacg tggccgccta aaagatcggc
      661 catcgccggt ccgctgccct tgtagggcac atgcacgatg tcgagcgtgg ccctgagctt
      721 gaagagctcc atggacaggt gctgcgccgt gcccgggccg gccgacgcat aggaatatgt
      781 gcccggatcc ttgcgcgcca gctcgaccag ttcggccagc gtgttcgccg ggaagctggg
      841 atgcgccacg atgaccagcg gcacgagaaa gatgttggag atcggcagga agtcgaccag
      901 cggcttgtac ggcaggtcgg gaaacaggct gggattgacg ccgaacgtgc cgctcgacac
      961 caccatcagc gtatagccgt ccggcgccgc ggccttgccg tattcggtgg ccggaatgcc
     1021 gctgccgccg gccttgtttt cgacgatcac ctgctgcttc cagacctcgg tcagtttctc
     1081 cgccatcagg cgggcgaaga tgtcggcggc ctggcccggc ggaaacggca cgatgaaacg
     1141 caccggcttg ttgggccatg gcgcctgcgc cagcgccggc gcggccaacg tcgcagtggc
     1201 ggcgccggcc gcggcaagcg cccgccgtcg cgtgagagag ctccgcatct tctgtttccg
     1261 cctccctttc gtacgacagg ctagcacagg cgctggaaaa tgagaggcat gggagtgccg
     1321 acggcgcggc agccccgcac tgttgcactg cggcaactga cggctatcgg cgtctcagac
     1381 tcgacacaat caccggcaaa atggacgtcg cggtgaggct ccagaggtcg atgggcttcg
     1441 tcgacatccc gccctgctac cccaagcccc gtgcccggca ccgcttacat ggagctgatt
     1501 ttgtgagcga tcgctattac gaggacttca aggtcggcga ccgtttcgtg agcggcggct
     1561 tgaccatgac cgaagccggc atcatcgatt tcgcgcggca atgggatccg cagccgttcc
     1621 acatcgatgt cgagttcgcc aagaagtgga gtttcgacgg tctcatcgcc tcgggcctgc
     1681 ataccatggc ggtcacgctg aagctgtggc tcgagcaggg cgtgttccgc gtctgcagcc
     1741 tcggctcgcc cggcatcggc gaggtccagt tcccgcggcc ggtgcggccg gccgacacgc
     1801 tacgcgtggt gaccgacatc gttgagctgc ggctctcatc gtccaagccc gatcgcggca
     1861 tcgcccgcat ccgccaggtc acgatcaacc agcgcggcga gcaggtaatg gagcaggaga
     1921 ccacggtgtt cctgaagcgc cgcccagtgc tggcggccaa cttcagcgcg cggtcctgac
     1981 gcgcgccctc aacgccaggc gaacaccggc tgctcgaaat ggtcgacgcg ggtatcgcgt
     2041 ccggccagcg ccacttcgcg gaactggtag agcaccgccg ccgtgggcgc attgacgttg
     2101 gcgacgggca gcggcaggcg gatgatcggc cggtccgatt cctcgatggc gatgatctcg
     2161 ggcgatccgt cgcgaaacag ctcgccacag gcgatgcgat aggcggccgc gacctcggca
     2221 ggattgggcg tcaccgtcac gccggccgcc cacacgacca cgggcgcgat cagatagccc
     2281 gagcgcgtcg gatagtcatc gagcgtgccc aggatgtcgt cggtggaggc aagtacgccg
     2341 agctcctcgt gcaactcgcg caaggcggtc tgctcgatcg tctcgccggg atcgacccgg
     2401 ccgcccggca acgcccattg cccgccatgc gacctcagcc gcggcatgcg cctggtgagc
     2461 aggaacgccg cctcgtgctc tccggacggt gaaggcgtct ccgcttcgac cacgaccacg
     2521 gccaccgcgg cgcgcttcag tccgccggtg tcggcgtggc ggcgcagctc gaagcggccg
     2581 agccggccgg caatggcggc gcgcagggcg tcgtcgaaac ggaaagaggt cacgcggcag
     2641 gaggccttgt gaaagtccac accactgcgg gcggaacgtt gcgccagatg cgcttgccgt
     2701 gcgcgccgtc gagatgcagg cgctcgcgca cggcgcgcgg caccggcggt gtcggcccat
     2761 aggtgaactg caccagggcg ccgccgcgcg gcagcgcctc gaagacgccg cccacgatgc
     2821 tttgcacgat gcccgccggc agcgagagca acggcaggct cgatacgacg gcggcaaccg
     2881 gcgccacctc atgctcggcc agaagccgcg gcagccgggc ggcgtcgccc tcgatgatgc
     2941 gcggtcccgg gaaatgacgg cgcaggaacc ttgcgagctc tggatcgcgc tcgacgaggg
     3001 ccaggcgctc gggcgcgagg ccggcggcca gcagggcctt ggtgacctcg cccgttccgg
     3061 cgcccagctc gacgacatgg cccggccggc ctgcaagggc cgccttggtg gtctccgcca
     3121 ttgcctcggc gagcagccgg ccgctcggca cgacggcgcc catcgcgaag ggccggcgca
     3181 gccagcgctt caagaagagg gttgtgccgg cgtgatcaag cgagggcatg gccgaacgct
     3241 aacagacgac ggccgcaagt cgacacggaa aagtgctggg ccttactgcg cgggctgcat
     3301 cgccggggcg gccatccggg gcgacggcgc cgcctcgaaa atggcgcggg catgccgcat
     3361 ctgctcgagc gcgttcacga tcgagacgta gaccgcggcg gcatagggca gcgactgcac
     3421 gaccatgaag gccgcccaca gccgcgcctc ggggtcgagc tggccgttgc gcagccacag
     3481 cacggccgcg cccagccaca gcaggacggc cagtatcgcc tcgccgcgcg ccatgccgag
     3541 cgccatgcca agcgtggcgc gctcgtccat cttgggcgtg cgcatgaacg gcagccggct
     3601 ggtcgccagc ccgtagatca ccgcgcgccc caccgtgtag gtgagcgcca gcccggccag
     3661 cgacgcgccg acgctctggc ggaaggtgca gcgcacgcgg tcgaaataga gtccgaacga
     3721 gtagagcagc ttgaagacga agatgccgat ggtcggcacg atgaattcgg ccggcggcag
     3781 gccgaccggc ttgatgccga acaacggcgg cagcagcacg gccagcagcc agcccagccc
     3841 cgcccaggtg aagacgaggt tcaaggcgtc ggcgaaccac ggcagccagc cggcgacgaa
     3901 atggtacttc tgccagaagg tgagcttggt cgtgttgctg aacatcttgc cggcgtgcgc
     3961 cttcatgatc tgcatggcac cgtaggccca gcggaagcgc tgcttcttgt agccggcgaa
     4021 atggtcgggc gtcaggccgt gcccgaagcg ctcgcggctg tacatggcgc cgtagccccg
     4081 ctccatcagg cgcaggccga gctcggtatc ctcggtgatg caccaggtcg cccagccgcc
     4141 cagctcttcc atcaggtcgc ggcgcaccag cgtcatggta ccgtgctgga tgatggcgtc
     4201 gtactcgttg cgcaggcaca tgccgatgtc gaagaagccg gaatactccc agttcagcat
     4261 ctccttgaag cggtcgccgc gcca
//
LOCUS       DASWGA010000322         3347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_921783, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000322 DASWGA010000000
VERSION     DASWGA010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3347
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_921783"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(253..744)
                     /locus_tag="VF991_07780"
     CDS             complement(253..744)
                     /locus_tag="VF991_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX9556378.1"
                     /translation="MDAIDRKIVALLQEDASLSLAQIAHRVGLSQSPCWKRIQRLEKA
                     GVILKRVALISPESVGMGLTVFVSIETGDHSSAWLAKFAQTVTAMPEVMEFHRMAGDI
                     DYMLRVAAPDMQAYDAFYKKLIDTMPLKNVTSRFSMERIKSTTAYPLAPDPRNPKDGK
                     KKV"
     gene            complement(792..1064)
                     /locus_tag="VF991_07785"
     CDS             complement(792..1064)
                     /locus_tag="VF991_07785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556379.1"
                     /translation="MLNLANQFVARATRLIFAAQDDPALWTISAHGRVVGSLVCQAGA
                     WRLSWFNGADRRLASYVGPLDGDVEALAETLSARLGAAVRLESLPV"
     gene            complement(1181..1930)
                     /gene="soxA"
                     /locus_tag="VF991_07790"
     CDS             complement(1181..1930)
                     /gene="soxA"
                     /locus_tag="VF991_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016669 - oxidoreductase activity, acting
                     on a sulfur group of donors, cytochrome as acceptor
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019417 - sulfur oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxA"
                     /protein_id="HEX9556380.1"
                     /translation="MLLVVFVATFAVAQGTADKRRSGYQDMGEALQKMQDDDTANPGM
                     LFVQLGGQLWDKPVGAANKSCADCHGAAASMKGVAARYPAIPKGAAKPVDLEGRINLC
                     RTANQQAEPFAPESRELLSLEAYVAHQSRGQPIAPPPDPQLAPFRDQGAEIYRRRQGQ
                     LNLSCAICHDDNAGKKLAGVTIPEAHPTGYPIYRLEWQALGSLKRRLRNCLVGIRAEA
                     YAYDGPEYVALEVYLMDRARGMILEAPGVRP"
     gene            complement(2049..2369)
                     /gene="soxZ"
                     /locus_tag="VF991_07795"
     CDS             complement(2049..2369)
                     /gene="soxZ"
                     /locus_tag="VF991_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier complex protein
                     SoxZ"
                     /protein_id="HEX9556381.1"
                     /translation="MTNVLINAPKTAKPGEIVEIKALILHPMETGFRPGTNGRIIPRN
                     IIERFVATWNGAEIFNMALSPAIAANPFVSFFAVAKESGTIGFRWTGDEGFLVEEKVA
                     IAVG"
     gene            complement(2366..2839)
                     /locus_tag="VF991_07800"
     CDS             complement(2366..2839)
                     /locus_tag="VF991_07800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006334222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxY-related AACIE arm protein"
                     /protein_id="HEX9556382.1"
                     /translation="MKRTPVMTAALDRRRFLAGVAIVTVLPFAPARATPDAMAASIKQ
                     VVGDVAIREGRVTLDLPPLVENGNAVPLTVSVESPMTEADHVKAIHVFNEKNPQPHVF
                     DARLGPRNGKAVIATRIKLADSQKIVAIAETSSGEFFSASADVIVTLAACIEDVT"
     gene            complement(2842..3288)
                     /gene="soxX"
                     /locus_tag="VF991_07805"
     CDS             complement(2842..3288)
                     /gene="soxX"
                     /locus_tag="VF991_07805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxX"
                     /protein_id="HEX9556383.1"
                     /translation="MARAGLLAVIVALSVPAASAQEGPRPYAVVRDAIPQPLASRPGD
                     ATRGRAIVANRSVGLCLLCHSGPIPEERFQGTLAPSLAGAGTRWSQAQLRLRIADGAR
                     LNPDTIMPPYYRTTGLQHVAKGFEGKTILTAEQVEDVVAYLATLKD"
BASE COUNT          563 a         1055 c         1158 g          571 t
ORIGIN      
        1 tagaccggcg aggggtgaac tggaagcgcc gtcgctggcc aagcgccctc tccgcccgcg
       61 aagcggctgt cgtgttcgca catctcggct caggggccct ctccgcccgc tttagcgggg
      121 ggagagggag gggacccgcg cttgcgcggg gagggtgagg tgggcctcat gtcgtcctga
      181 gcgcagcgaa ggacctcatc gccgcttgcc acgggcatga gatccttcgc ttcgctcagg
      241 atgacagtgc gcctagacct tcttcttccc gtccttcggg tttcgcggat cgggagccaa
      301 gggataggcc gtcgtcgact tgatgcgctc catggagaag cgcgaggtca cgttcttgag
      361 cggcatggtg tcgatcagct tcttataaaa cgcatcgtag gcctgcatgt cgggcgccgc
      421 cacgcgcagc atgtagtcga tgtcgccggc catgcgatgg aactccatga cctcgggcat
      481 ggcggtcacc gtctgggcga acttggcgag ccaggccgag gaatgatcgc cggtttcgat
      541 cgagacgaac accgtgagcc ccatgccgac cgactcgggc gagatcagcg ccacccgctt
      601 caggatgacg ccggccttct ccagtcgctg gatgcgcttc cagcacgggc tttgcgacaa
      661 gccgacgcga tgcgcgatct gcgccagcga aaggctcgca tcctcctgga ggagagccac
      721 gatcttcctg tcgatcgcat ccatgattcg accacccgtg cagagctagt gacgcactgt
      781 caacaggcgg ttcagaccgg caacgactcc aggcgcaccg cggcgcccag ccgggcgctc
      841 agcgtctcgg ccagggcttc gacatcgccg tccagcgggc cgacatagct ggcaagccgc
      901 cggtcggcgc cgttgaacca ggacagccgc caggcgccgg cctggcagac cagcgagccg
      961 acgactcgac catgggccga gatcgtccaa agggccggat cgtcctgggc ggcgaagatg
     1021 aggcgcgtgg ctcgggcgac gaactggttg gcgaggttca acatgcgccg actctagggg
     1081 ccggcggaac gtcgcggcaa tggaacgggc agccgaatgt ggcggtgcac gcagcagatc
     1141 catctacccg acgaaggatg aggagaatat ttctcttcga tcagggcctg acgccgggcg
     1201 cctcgaggat catgcccctg gcgcgatcca tcaaatagac ttccagcgcg acatattcgg
     1261 gtccgtcgta ggcgtaggct tcggcgcgga tgccgaccag gcagttgcgc agccggcgct
     1321 tcagcgaacc gagcgcctgc cattccaggc gatagatcgg atagccggtc ggatgggcct
     1381 cgggaatggt cacgccggcg agcttcttgc cggcgttgtc gtcgtggcag atggcgcagc
     1441 tcaggttgag ttggccctgt cggcgtcggt agatctcggc gccctggtcg cgaaacggcg
     1501 cgagctgcgg atcgggcggt ggcgcgatcg gctggccgcg cgactgatgc gcgacatagg
     1561 cttcgagcga cagcagctca cggctttccg gcgcgaacgg ttcggcctgc tgattggcgg
     1621 tgcgacagag gttgatgcgg ccttcgagat cgaccggctt ggccgcgccc ttgggaatgg
     1681 ccgggtagcg ggcagcgacg cccttcatgc ttgcggcggc gccgtggcaa tcggcacagg
     1741 atttgttggc ggcgccgacg ggcttgtccc aaagctgacc accgagctgg acgaacaaca
     1801 tgccgggatt ggccgtatcg tcgtcctgca tcttctgcag cgcttcgccc atgtcctgat
     1861 agcccgagcg gcgcttgtcg gcagttccct gcgccacggc gaacgtggcg acaaagacga
     1921 caagcagcat ggcgcatgct gcttgtcgcc ccgagcgtcg agacgacgtc atgctcttcc
     1981 ggaccgcgag cgtctcgctc gctcatgagc gagccggagg ctcgcggtcc ggaagagcat
     2041 gagcggaatc atcccactgc gatggcgacc ttttcctcga cgaggaaacc ttcgtcgccc
     2101 gtccagcgaa agccgatggt gccgctctcc ttcgcgaccg cgaagaacga gacgaacgga
     2161 ttggcggcga tcgccggcga aagcgccatg ttgaagatct ccgccccgtt ccaggtggcg
     2221 acgaagcgct cgatgatgtt gcgcggaatg atgcggccgt tggtgccggg ccggaagccc
     2281 gtctccatcg gatgcaggat cagcgccttg atctcgacga tctcgcccgg cttggcggtc
     2341 ttgggcgcat tgatgaggac gttggtcatg tgacgtcctc gatgcaggcg gccagggtga
     2401 cgatcacgtc ggcgctggcg ctgaaaaact cgcccgagct ggtttcggcg atggcgacga
     2461 tcttctggga atcggcgagc ttgatgcgcg tggcgatcac cgccttgccg ttgcgcggcc
     2521 cgagccgggc gtcgaagacg tgcggctgcg ggttcttctc gttgaagacg tggatcgcct
     2581 tgacgtgatc ggcctcggtc atcgggcttt cgaccgacac ggtgagcggc acggcattgc
     2641 cgttctcgac cagcggcggc aggtcgagcg tcacccggcc ctcgcggatc gcgacgtcgc
     2701 ccacgacctg cttgatggaa gcggccatgg catccggtgt cgcgcgcgcc ggcgcgaaag
     2761 gcagtacggt gacgattgcc acgccggcca agaaacgacg tcgatccagc gctgctgtca
     2821 tgacaggagt gcgcttcatc atcagtcctt caacgttgcg agataggcta ccacatcctc
     2881 gacctgctcc gcggtcagga tggtcttgcc ttcgaagccc ttggcgacgt gttgcaggcc
     2941 cgtggtccga taatagggcg gcatgatcgt gtcgggattg agacgcgcgc cgtcggcgat
     3001 gcgcaagcgc agctgggctt gcgaccagcg tgtgccggcg ccggcaaggc ttggcgccag
     3061 agtgccctgg aaacgctcct cggggatcgg gccgctgtgg cagagcaggc aaagcccgac
     3121 gctgcggttg gcgacgatcg cccgaccgcg agtcgcgtcg cccggacgag aggcgagcgg
     3181 ctggggaatc gcatcgcgca cgacggcgta gggccgcggc ccctcctgcg ccgacgccgc
     3241 gggaaccgac agggccacga tcacagccag cagccccgca cgtgccatgg cgtcagccga
     3301 acgtctcggc ggtgatcgtc ttgaaccagc tgtcggcgaa gagcgcc
//
LOCUS       DASWGA010000323         5049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2066953, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000323 DASWGA010000000
VERSION     DASWGA010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5049
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2066953"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..477)
                     /locus_tag="VF991_07810"
     CDS             complement(<1..477)
                     /locus_tag="VF991_07810"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX9556384.1"
                     /translation="MSGPDDVMFSPAVKAEQTRLGSRTMFEDREFKSEITDDLRQFLA
                     VIDTFFFATASADGRPYVQHRGGPPGFLKPIDTHMLAFADFGGNRQYITLGHLKENDR
                     AHIFILHFATRQRVKLWGRARVVEGDLELMERLVDPAYKARPERAIAFRLEVWDSNC"
     gene            complement(480..1343)
                     /locus_tag="VF991_07815"
     CDS             complement(480..1343)
                     /locus_tag="VF991_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9556385.1"
                     /translation="MDQDLKATLSRIAEALDRLAPSAPTSADITAAEAYVWHAAGHRL
                     EAVTKVNRVGLGLLMGIDRQKETLLENTRRFAKALPANNALLWGSRGSGKSSIVKAVH
                     AHVNREMGGPPGPLALVEIHREDIPSLPALLSMIRPCKRRFVVFCDDLSFDGQDAGYK
                     SLKAVLEGGIEGRPDNVVFYATSNRRHLMPRDMIENERSTAINPSEAVEEKVSLSDRF
                     GLWLGFHNADQDTFFAMIEGYADHYELGVPTETLRKQAVEWSVTRGARSGRVAWQFIQ
                     EVAGQLGKKLE"
     gene            1493..1918
                     /gene="yajC"
                     /locus_tag="VF991_07820"
     CDS             1493..1918
                     /gene="yajC"
                     /locus_tag="VF991_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEX9556386.1"
                     /translation="MFISQAWAQAGGSGGGDFLVQLFPLILIFVVFYFLLIRPQQAKV
                     KAQREMLGGVKRGDRVVTGGGIIGLVTKVISDNELQVELAEGVRVRIVKQTITDILTR
                     GESVRGAKEAEEDDKPMLPPPAPAGERKSLLGSLFGGKK"
     gene            1945..3615
                     /gene="secD"
                     /locus_tag="VF991_07825"
     CDS             1945..3615
                     /gene="secD"
                     /locus_tag="VF991_07825"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEX9556387.1"
                     /translation="MLNLQRWQTIAVIAFTALAVLFALPNLLPAGVLDHLPGWYQQSR
                     INLGLDLRGGAHFLLEADLRSVLTERLTNLSDSVRGELRKQQVGFKDVTVEPGRAVVV
                     TLRDEAQRAKALEAIRNVDPALAATGNGDTIRLTYSDQDLFRRKKEVIDQSIEILRRR
                     VDETGTIEPTIVRQGDDRILLQVPGIKDTTDLKRKINQTAKLTFHLVNEDVAASGQSA
                     PATLPPTTFLVPTREGMQALRATNPKAWEEIQNANPKLSPEQICRRFQPPCLPVLKRV
                     VVGGEDLDDAKATFEQQQGGRPIISFTFNSAGGRAFCAATRANIQKRLAIQLDNEIIS
                     APVVQSAICGGSGIITGTFTTQQTQEQALLLRSGALPATLSIIEERTVGADLGADAIQ
                     SGTTAALVGTALVILFMLAIYGPVFGGFASLAMLVNMLLVFAGMSILGASLTLPGIAG
                     LVLTVGMSVDSNVLIYERVREEKANGRSPFSALATGYERALTAVIDSNLTALIAGVLL
                     FGFGSGPIRGFATSLTLGLLTHLFTATIFTRMLLATWVRLKRPTELPI"
     gene            3624..4802
                     /gene="secF"
                     /locus_tag="VF991_07830"
     CDS             3624..4802
                     /gene="secF"
                     /locus_tag="VF991_07830"
                     /inference="COORDINATES: protein motif:HMM:TIGR00966.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEX9556388.1"
                     /translation="MLWRPHHLIRARTTFDFLGKRKLALAISTTINVLSLVGALVFGL
                     NFGIDFEGGIAVQVRAKQGTVHLDELRSTLGALGVGEVSLQEFGDPSTALIRVQRQEG
                     NAQCVANAERVMKRRAGDGWSVKPGASGTGDVEFAAPRALDAASWRDAVSRVGLTVQE
                     RQLPRGNTNTAKIDMTPEQRAEWCQQVAIKLVEDAIGDKYELRGTESVGPKIGEELMR
                     SGVIAVIATLAAITIYVWFRFEWQFGVGALIALLHDVISTLGLFVLLRLDFSLTALAA
                     LLTIAGYSINDTVVIFDRVRENMRRYKKMGLVELLNFSINETLARTLMTSGTVFVAVL
                     ALVLFGGPVLYSFSIAMLWGVIVGTYSSIWIASACLVYLKLRPEQLRTSEEKGEKAKA
                     "
     gene            4799..>5049
                     /locus_tag="VF991_07835"
     CDS             4799..>5049
                     /locus_tag="VF991_07835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HEX9556389.1"
                     /translation="MKPPAPGPSDKTLPTPDPSQVQLIRSYGPGHFLIGERDWRSPVL
                     VTPTVTVAWAVARAEDLSLDTLAPLKEAPTPTELLVVGCG"
BASE COUNT          831 a         1733 c         1631 g          854 t
ORIGIN      
        1 gcaattgctg tcccagactt ccagcctgaa ggcgatcgcc cgttcgggcc ttgccttgta
       61 ggcaggatcg accaggcgct ccatcagttc gaggtcgcct tcgacgacgc gggcacggcc
      121 ccacagcttg acccgctgcc gggtggcgaa atgcaagatg aagatgtgag cgcggtcgtt
      181 ctccttgaga tgaccgagcg tgatgtactg ccggttgccg ccgaaatcgg cgaaggccag
      241 catgtgcgtg tcgatcggct tcagaaaacc cggcggtccg ccgcgatgct gcacataggg
      301 ccgaccgtcg gcgctggccg ttgcaaagaa gaaggtatcg atcaccgcca ggaactgccg
      361 cagatcatcg gtgatctcgg acttgaattc gcggtcctcg aacatggtcc gcgatcccag
      421 acgcgtctgc tccgccttga ccgccggcga gaacatgacg tcgtcaggtc cgctcattgt
      481 tactccagct tcttgcccag ttggcccgcc acttcctgga tgaactgcca ggcgacgcgg
      541 cccgagcgcg cgccgcgcgt caccgaccat tcgaccgcct gcttgcgcag cgtttccgtc
      601 ggcacgccga gctcataatg gtcggcgtag ccttcgatca tggcgaagaa cgtgtcctgg
      661 tcggcattgt ggaagcccag ccacaggccg aagcggtcgc tgagcgacac cttctcttcc
      721 accgcctccg acggatttat cgccgtcgag cgctcgttct cgatcatgtc gcgcggcatc
      781 aggtggcggc ggttggaggt ggcgtagaac acgacattgt ccggccgtcc ttcgatgccg
      841 ccttcgagca ccgccttcag cgacttgtag ccggcgtcct ggccgtcgaa ggagaggtcg
      901 tcgcaaaaca ccacgaagcg gcgcttgcaa ggacggatca tcgacagcag cgcgggcagc
      961 gaggggatgt cctcgcgatg gatttcgacc agcgccagcg gacccggcgg cccgcccatc
     1021 tcgcggttca catgggcgtg gaccgccttc acgatcgagc tcttgcccga gccgcgcgag
     1081 ccccatagca gcgcgttgtt ggccggcagc gccttggcga agcgccgcgt gttctcgagc
     1141 agcgtctcct tctggcggtc gattcccatc agcaggccga ggccgacccg gttgaccttg
     1201 gttacggctt ccaggcggtg gccggcggcg tgccagacat aggcctcggc ggcagtgata
     1261 tcggcgctgg tgggggcgga cggggcaagc cggtcgagtg cttctgcgat gcgtgaaagc
     1321 gtggctttaa ggtcttgatc catcgttgcc ggcggcgtga aagggagcga ccatatcgcc
     1381 ctggcccttg cgttgcaaag cggggccggg ccgctatagt ccgcgcgctt ttcgacaggg
     1441 cactcatggc cgcgacgcgg ccatgacgcc agggaaggat ggggggcgga agatgttcat
     1501 atcccaggca tgggcacagg caggcggctc gggcggcggg gatttcctcg tccagctctt
     1561 cccgctcatt ctgatcttcg tcgtcttcta ctttctgctg attcgcccgc agcaggccaa
     1621 ggtgaaggcg caacgcgaga tgctgggcgg cgtcaagcgc ggcgatcgcg tcgtcaccgg
     1681 cggtggcatc atcggcctgg tcaccaaggt gatctccgac aacgagctgc aggtggaact
     1741 cgcagaaggc gtgcgcgtgc gcatcgtcaa gcagaccatc accgacatcc tcacgcgcgg
     1801 cgaatcggtg cgcggtgcca aggaggcgga ggaggacgac aagcccatgt tgccgccgcc
     1861 ggcgccggca ggcgagcgca agagcctttt gggcagcctg ttcggcggca aaaagtagcc
     1921 gcaaaggact tttagaaggt cgtaatgctc aatcttcagc gctggcagac cattgccgtg
     1981 atcgccttca cggcgctggc cgtgttgttt gcgctgccca acctgttgcc ggccggcgtg
     2041 ctcgatcacc tgccgggctg gtaccagcag agccgcatca atctcggtct cgacctgcgc
     2101 ggcggcgccc acttcctgct cgaagccgac ctgcgctcgg tgctgaccga gcgcctgacc
     2161 aacctcagcg attcggtgcg cggcgagctg cgcaagcagc aggtcggctt caaggacgtc
     2221 accgtcgagc cgggccgcgc cgtggtcgtg accttgcgcg acgaggccca gcgggccaag
     2281 gcgctggagg cgatccgcaa cgtcgatccc gcgctcgccg ccacgggcaa cggcgacacc
     2341 atccggctca cctattccga ccaggacctg ttccgccgca agaaggaagt gatcgaccag
     2401 tcgatcgaga tcctgcgccg ccgggtcgac gagaccggca ccatcgagcc gaccatcgtg
     2461 cgccagggcg acgaccgcat cctcttgcag gtgccgggca tcaaggacac caccgacctc
     2521 aagcgcaaga tcaaccagac cgccaagctc accttccatc tggtgaacga ggacgtggcg
     2581 gcatccggcc agagcgcgcc ggccaccctg ccgcccacca ctttcctggt gccgacgcgc
     2641 gagggcatgc aggccctgcg cgcgaccaat cccaaggcgt gggaggagat ccaaaacgcc
     2701 aacccgaagc tctcgcccga gcagatctgc cggcgcttcc agccgccctg cctgccggtg
     2761 ctcaagcgcg tcgtggtggg cggcgaggat ctcgacgacg ccaaggccac cttcgagcag
     2821 cagcagggcg gccggccgat catcagcttc accttcaact cagccggcgg ccgcgccttc
     2881 tgtgccgcca cccgcgccaa tatccaaaag cgcctggcca tccagctcga caacgagatc
     2941 atcagcgccc cggtcgtgca gagcgcgatc tgcggcggca gcggcatcat caccggcact
     3001 ttcaccaccc agcagaccca ggagcaggcg ctgctgctgc gctcgggcgc gctgccggcc
     3061 acgctgagca tcatcgagga gcgcaccgtc ggcgccgact tgggcgccga tgccatccag
     3121 tccggcacga cggcggccct ggtcggcacg gcgctggtca tcctcttcat gctggccatc
     3181 tacggcccgg tgttcggcgg ctttgccagc ctcgccatgc tggtcaacat gctgctggtg
     3241 ttcgccggca tgtcgatcct gggtgcctcg ctcacgctgc ccggcatcgc cggcctagtg
     3301 ctgaccgtcg gcatgtcggt cgattccaac gtgctgatct acgagcgcgt gcgcgaggag
     3361 aaggccaacg gccgctcgcc gttcagcgcg ctcgccaccg gctatgaacg cgcgttgact
     3421 gcggtcatcg attccaacct gaccgcgctg atcgccggcg tcctgctgtt cggcttcggc
     3481 tcgggcccga tccgcggttt cgccacctcg ctcaccctcg gcctgttgac ccatctgttc
     3541 accgccacca tcttcacccg catgctgctg gccacctggg tacgcttgaa gcggcccacc
     3601 gaactgccga tctgaggcgc gccatgctgt ggagaccgca ccacctcatc cgtgcccgca
     3661 ccaccttcga cttcctgggc aagcgcaagc ttgcgttggc gatctcgacg acgatcaacg
     3721 tgctgtcgct ggtcggcgcc ttggtcttcg ggctcaattt cggcatcgac ttcgaaggcg
     3781 gcatcgccgt ccaggtgcgc gccaagcagg gcacggtcca tctcgacgag ctgcgctcga
     3841 cgctgggcgc gctcggcgtc ggcgaggtat cgctgcagga attcggcgat cccagcaccg
     3901 ccctgatccg cgtccagcgc caggagggca acgcccagtg cgtggccaac gccgagcgcg
     3961 tcatgaagcg ccgcgccggc gacggctgga gcgtcaagcc cggcgcctcc ggcaccggcg
     4021 acgtcgagtt cgccgcaccc cgcgcgctcg acgcggcaag ctggcgcgat gcggtgagcc
     4081 gggtcggcct caccgtccag gagcgccagc tgccgcgcgg caacaccaac accgccaaga
     4141 tcgacatgac gcccgagcag cgcgccgaat ggtgccagca ggtggcgatc aagctggtcg
     4201 aggatgcgat cggcgacaaa tacgagctgc gcggcaccga atcggtcggc cccaagatcg
     4261 gcgaggagct gatgcgcagc ggcgtcattg ccgtcatcgc caccttggcc gccatcacga
     4321 tctacgtctg gttccgcttc gaatggcagt tcggcgtcgg cgccctgatc gcgctgctgc
     4381 acgacgtcat ctcgaccttg ggcctgttcg tgctgctgcg gctcgatttc agcctgaccg
     4441 cgctggcagc cctgctgacc atcgccggct actcgatcaa cgacaccgtc gtgatcttcg
     4501 accgcgtgcg cgagaacatg cggcgctaca agaagatggg cctggtcgag ctgttgaact
     4561 tcagcatcaa cgagacgctg gcgcgcaccc tgatgacctc cggcacggtg ttcgtcgcgg
     4621 tgctggcgct ggtgctgttc ggcgggccgg tgctctacag cttctcgatc gccatgttgt
     4681 ggggcgtcat cgtcggcacc tactcctcga tctggatcgc ctcggcgtgc ctggtctacc
     4741 tcaagctgcg gcccgagcag ctccggacca gcgaggagaa gggcgagaag gccaaggcgt
     4801 gaagccgccg gcgccaggac cttctgacaa gaccctgccg acgcccgacc cgtcgcaggt
     4861 ccagctcatc cgcagctacg gaccgggtca tttcctgatc ggcgaacgcg actggcgctc
     4921 gcccgtgctg gtgacaccga ccgtcaccgt cgcctgggcc gtcgcgcggg ccgaggatct
     4981 gtcgctcgac accctggcgc cgctgaagga ggcgccgaca ccgaccgaat tgctggtcgt
     5041 gggctgcgg
//
LOCUS       DASWGA010000324        11193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1936792, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000324 DASWGA010000000
VERSION     DASWGA010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 11193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11193
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1936792"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..546
                     /locus_tag="VF991_07840"
     CDS             <1..546
                     /locus_tag="VF991_07840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556390.1"
                     /translation="IPEFYDRDADGLPRAWLARIRRSMSTLTPAFGSTRMVREYVEKA
                     YLPMAKVQRARWADDCALAKALRDWSDRLERHWSSLRAGEPTVVGADGRWRFSVPVFG
                     GDVPLAAVRVELFADEGPDIPAEVVTLHQEHAIPGTANGHIYAGEVEAGRPAQDYSVR
                     IVPYHPAAHVPMELPLIAWQR"
     gene            complement(527..808)
                     /locus_tag="VF991_07845"
     CDS             complement(527..808)
                     /locus_tag="VF991_07845"
                     /inference="COORDINATES: protein motif:HMM:NF022603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HEX9556391.1"
                     /translation="MIPEETIRLRSYLIWQQAGYPDGRALEHWLRAKAELQAEYMASL
                     TWVDECERIVWPRLPILRPPQRLTSARIPPAERRVPLAERRAPPIAATR"
     gene            complement(1058..2020)
                     /locus_tag="VF991_07850"
     CDS             complement(1058..2020)
                     /locus_tag="VF991_07850"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9556392.1"
                     /translation="MLDRRVFLASAAASLSVPATAQQWPTKPIRIIVPFPPGQSTDIL
                     ARVMADQLTKALGQQVIAENRPGAGGSIGADVAAKSPPDGYTLLMVTISTHGIAPAIY
                     PHLPYDAQKDFAPIANIGLTPQVLMASLKSGITSVQDLIAKAKAGADLNYGSSGNGAA
                     SHLAVEMLGSAAGVKLTHVPFKGNADALMALQSGDIQLMSDAVPGAVGPVNTGKVKAL
                     GIADQRRSPFLPDVPTIAEQGVEGVVAVGWIGLSAPARTPEPILDRLSAEVMKILKQP
                     EVLEKLKSLAFVPAKESRQEFEAYIAIENTKWRKIVRDAGVKIE"
     gene            complement(2106..2711)
                     /locus_tag="VF991_07855"
     CDS             complement(2106..2711)
                     /locus_tag="VF991_07855"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018408698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEX9556393.1"
                     /translation="MLLLIDNYDSFTYNLVHFLGDLGARCVVHRNDQITVDEAMALKP
                     AGIVLSPGPCTPNEAGICMDLVKAAAKAQLPLLGVCLGHQAIGQVFGGKVVRAPVPMH
                     GKLSGVQHTGQSVFEDVPSPFQATRYHSLIVDRAGFPKELEVTAETGDIVMGLRHKSL
                     PIHGVQFHPESIASEHGHKILENFLKIAGEHPSQQNKKKAA"
     gene            2778..3662
                     /locus_tag="VF991_07860"
     CDS             2778..3662
                     /locus_tag="VF991_07860"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX9556394.1"
                     /translation="MVVEPLIVGLLLLAALMHASWNAILKSDESDRLATFGVIMTTGT
                     VMGLCAVPFLPWIDPAAWKYLVSSVLIHVLYYTFLLKAYSYGDLSHTYPIARGLGPLL
                     VALVSGRFIGEHLRTQDIVGVLLLSFGLVSLAMPLRNVVPRPGSRHGLATLFAVLTGI
                     TIAAYIIADGLGVRSAGPTFEHRLSYIAWLCVVEGPWLLVLAIVIRPKSVWTHLRRTW
                     WRGVMGGVIANVGYGIAIYALVLGPMAHVAALRETSVLFGALMGTLLLGEPFGVRRVA
                     AALVIVVGLVLMNGPQLI"
     gene            complement(3655..4206)
                     /locus_tag="VF991_07865"
     CDS             complement(3655..4206)
                     /locus_tag="VF991_07865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556395.1"
                     /translation="MAVNPGTDKVDTVAVELRLDRVLRLYNSLDPAPFHEKELEAAAD
                     DYIVGSAEDAGSRPIRLVIMLPHDELARPEASQVPVSIHHHFELRRDSERRHLRNMWW
                     RGRTSLLVGLAFLAVCLLTRNVLAASPFPLSHVLSEGLLIVGWVAMWGPLDIFLYGWW
                     PIYSRCRLFDRLARLDVELRPLR"
     gene            4242..6917
                     /locus_tag="VF991_07870"
     CDS             4242..6917
                     /locus_tag="VF991_07870"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HEX9556396.1"
                     /translation="MSTRNLDKMMAPRSVVAIGASARPGSVGAAVTRNLLAGGFQGEI
                     HLVNIKGGDIEGRPVLKSLAELPQPADLAVIMTPAETVPRLVVELGERGTKVAVIITA
                     GPGDGAAAHDDNKRWRKRILRAAQPHLLRIVGPNCIGYMVPRLGLNTSFGPAGLISGR
                     VAAVAQSGAVLAGLADWGTAQGIGFSHLISMGDMTDVDFGDVLDMLSRDYETRAVLMY
                     VEGITQARKFMSAARSVARLKPVIALKAGRHAAAAKAAASHTGSMAGSAAVYDAAFAR
                     AGLVRVHGLGELFDAAETLGHGITPRNERLAILTNGGGVGIIATDLLMDEGGELAALQ
                     PRTVTQLDRHMPRAWSRGNPVDIVGDADGARYAAAVDALADDRGVGAVLAMNVPTALT
                     SSVEAARAVTGAPGAKVVPLIGCWIGGPQAEAGRKVLHEAGIPAYDTPLRAVRGFMHI
                     VQYRRGQRALQRTPPSVPEARSDSQLVRAIVHGALAEKRKVLTEPEAKRVLAAYGIPV
                     VPTEVVLDAAEAAHAAGRIGFPVAVKILSREITHKTDVGGVALDLGSEQAVMDAVRAM
                     HDKVCTAAPGARVDGFVVQPMIKRPHAVELILGAAEDPVFGPILLVGHGGVAAEVIDD
                     KALALPPLDPVLAEDALSRTRVDRLLRGYRDRAPAARGAVCDAMVRLSQLIADVGEIA
                     ELDINPLLADADGVIALDARIVVAAPEGRERAARFAIKPYPVELETEVAHGEERLRLR
                     PIRPDDEALLQAFTRRLTPEDIRMRFFGPMRELSHEMAARLTQIDYDREMAFLLLDGK
                     ELLGVGRLAADPGFEQAEFALIVASDRQGRGYGSLLLNHVLHYAKARGVQRVVGQVLR
                     ENHKMLELTKRLGFKREGGRSGEADIRVVKLTSSL"
     gene            7071..8126
                     /locus_tag="VF991_07875"
     CDS             7071..8126
                     /locus_tag="VF991_07875"
                     /inference="COORDINATES: protein motif:HMM:NF016623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HEX9556397.1"
                     /translation="MQRFGAIIAWIDAHRWHSIVAGLVLLFVASLFGGYWIAERLESR
                     DGDRLARDTLEEMKRSATTETAPRYARIEDLPGLPKYTDAEPGQPRVTLEEKPRATKP
                     QQLAAAVSSAETWRKNAVPFADLNSRPLVAIVIDDVGIDRPRSKRAWELAGPLTMSFL
                     PYAKDLREQARTARARGHELMLHLPMEPNGRNDPGPNALLVSLPDSELRQRTVAALDS
                     FDGYAGVNNHMGSRFTAFRPGMETVLRQFKGRGLMFLDSRTTAQSVGDQVAQEIGLPG
                     MVRHVFLDDDESLESVRRKLAETEAMARRQGFVVAIGHPHETTLQALGEWLPGLPAKG
                     LALAPATAVLRKRNGWD"
     gene            8227..9420
                     /locus_tag="VF991_07880"
     CDS             8227..9420
                     /locus_tag="VF991_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003613697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEX9556398.1"
                     /translation="MPEFLILRNAAARSTVSGLESFGPAMASAAPTPPLPQIETHDIS
                     LREAMSAARDPDVAAVAIPMPIKLIMPFDVAAGAAAAGDAWGISAVKADTSPMTGDGV
                     VVAVLDTGIDKAHPAFAGVEIIEKDFSGSGDGDRQGHGSHCAGTIFGRDVDGKRIGIA
                     RGVKKALIGKVLSDTGGGTSDMIFRGIQWALDQGAHVISMSLGFDFPGAVKRMEDSGL
                     PTQPAVSNALEAYRSNLRFFDALMQMVKAQAAFRDTAVVVAATGNESNRSAPRPYTIS
                     ASLPAASDGVVSVAALGPDGGGKFNIAPFSNTMAQVAAPGVDILSVKIGGGLRTLSGT
                     SMACPHVAGVSALWWQALRSGGAVRPSASLVTANLIARSRTDVLAAGVTPEDRGGGMV
                     TAPQP"
     gene            9508..11124
                     /gene="ggt"
                     /locus_tag="VF991_07885"
     CDS             9508..11124
                     /gene="ggt"
                     /locus_tag="VF991_07885"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9556399.1"
                     /translation="MRYAKKAMIVAPQPEPAEAGADVLREGGNAVDAGIACALVQGVV
                     DPLMCGIAGFGSCGIYMPGKKFHGYIDAHAPAPLGARPDMWANLIESEARDGYGFILK
                     GRLNDIGYKSICAPANLKMYYEAHKEHGSLPWSRIVEPAIAWAENGWTVRPHVHYWWS
                     DEGAFGRAPNWERTSFTEAARALYCRADGSPKRVGDRVVNRDYAQTLRAIAKGGADVF
                     YSGELARAIAEDMKKNEALLSIDDLLAWKPVRNPPLWGDYRGYAVSTNQPPGGGVMLL
                     EMLNILENFDLSAMEHNSREYLRVVSEAMKRATIDKDAHVGDPKFVDVPVDRLTSKSY
                     AKTMAGEIVRGVKAPVPRFNSGAVSKDTTHISVLDKDGNCFSMTHSLGMPSGVVTPGL
                     GFMYNGCMGVFDPRPGRAGSIAPGKARFSSVVPSIVFKDGKPHLIIGAPGATQIAMGV
                     LHVILNALDFDMTMVEAVSAPRFSATSDTIDISNRIPWKVERELQAEGYPVVRSPYTF
                     GFAAVHAIRVHEDGLDGGADPGHDGVVIAT"
BASE COUNT         1828 a         3602 c         3863 g         1900 t
ORIGIN      
        1 attccggagt tctacgatcg cgacgcggat gggctgccgc gcgcgtggct ggcgcggatt
       61 cgccggagca tgtcgacgct gacgccggcg ttcggcagca cgcgcatggt tcgcgaatac
      121 gtcgaaaagg cctacttgcc gatggccaag gtccagcgcg cgcgatgggc cgacgactgt
      181 gcgctggcca aggcgctgcg cgattggtcc gacaggctag aacgccattg gtcgagcctg
      241 cgcgccggcg aacccaccgt ggtcggggcc gacggacgat ggcgcttttc agttcccgtc
      301 ttcggcgggg atgtcccgct ggcagccgtg cgcgtcgaat tgttcgccga cgaagggccg
      361 gacattcccg ccgaggtcgt cacgctgcac caggagcatg ccatcccggg caccgccaac
      421 ggtcacatct atgccggaga agtcgaggca ggcaggcccg ctcaggacta cagcgtccgc
      481 atcgtgccct accatcccgc ggcgcacgtc ccgatggaat tgccgcttat cgcgtggcag
      541 cgataggcgg cgcgcgtcgc tcggccagag gcacgcgtcg ttcggccgga ggaatgcgcg
      601 cagaagtaag ccgctgcggc ggccgcaaga tcggcaggcg cggccacacg atgcgctcgc
      661 actcgtcgac ccaggtgagc gatgccatat actcggcctg gagctcagcc ttggcacgca
      721 gccagtgttc gagggctctg ccatcggggt agccggcttg ttgccagatg agatagctcc
      781 gcaggcggat cgtttcctca gggatcatgg gcttctcctt gagtttcggc cgcacgaacg
      841 cttcgtcagg tcactggcgg tcgaccgaga tttgcctccc gcttgggatg gcaacgactc
      901 ggcggaccgc ggataccaat attttgctga cggcgtggtc tatgtagcag gacccgcgtg
      961 ccggctgaag tcctatgaca gggctcgcga aaaaaaattg gctcaccgag ccggcctgcg
     1021 ctgaattttc agcgccgatg cgatctaggc aggccgatca ctcgatcttg acgcccgcat
     1081 cgcggacaat cttgcgccac ttggtgttct cgatcgcgat gtaggcctcg aactcctggc
     1141 gcgattcctt ggccggcacg aaggccaggc ttttaagctt ctccagcacc tcgggttgct
     1201 tgaggatttt catcacctcg gcgctcagtc ggtcgaggat gggttcgggc gtgcgcgccg
     1261 gcgccgacag gccgatccag cccacggcga ccacgccctc gacgccctgc tcggcgatgg
     1321 tcggcacgtc gggcaggaag ggcgagcggc gctggtcggc gatgccgagc gccttgacct
     1381 tgccggtgtt caccgggccg acggcgccgg ggacggcatc cgacatgagc tggatgtcgc
     1441 ccgattgcag cgccatcagc gcatcggcat tgcccttgaa cggcacgtgg gtgagcttga
     1501 cgccggcggc gctccccagc atctcgacgg caaggtggct cgccgcacca ttgcccgagg
     1561 agccatagtt gagatcggcg ccggcctttg ccttggcgat caggtcctgc accgaggtga
     1621 tgccgctctt caggctcgcc atcagcacct gcggcgtcag cccgatattg gcgatcggcg
     1681 cgaaatcctt ctgcgcgtcg tagggcaggt ggggatagat cgcgggcgcg atgccgtgcg
     1741 tggagatcgt caccatcagg agcgtgtagc cgtcgggcgg cgatttggct gcgacgtcgg
     1801 cgccgatgct gccgcccgcg cccggccggt tctcggcgat cacctgctgg ccgagcgcct
     1861 tggtgagctg gtcggccatg acgcgcgcca aaatgtcggt cgactggccg ggcgggaagg
     1921 gcacgatgat gcggatcggc ttggtgggcc attgctgggc agtggcaggc accgatagcg
     1981 acgccgcagc ggaggcgagg aacacacgtc gatcaagcat agctgtcatc ccgagcgcag
     2041 cgagggacct ttcctgttgc ctcaagggtc cctcgcttcg ctcgggatga caacgggatt
     2101 ggtggctatg ctgccttttt cttgttctgc tgcgaaggat gctctccggc gatcttgagg
     2161 aaattctcca ggatcttgtg gccgtgctcc gaagcgatgc tctcgggatg gaactgcacg
     2221 ccgtggatcg gcagcgactt gtggcgcagg cccatgacga tgtcgccggt ctcggcggtg
     2281 acttcgagtt ccttcgggaa gccggcgcgg tcgacgatca gcgaatggta gcgcgtggcc
     2341 tggaagggcg agggcacgtc ctcgaacacg ctctggccgg tgtgctgcac gcccgacagc
     2401 ttaccgtgca tgggcaccgg cgcgcgcacc accttgccgc cgaacacctg gccgatcgcc
     2461 tgatggccga ggcagacacc gagcagcggc agctgcgcct tggccgccgc cttgacgagg
     2521 tccatgcaaa tgccggcctc gttgggcgtg caggggccgg gtgagaggac aatgccagcc
     2581 ggcttcaagg ccatcgcctc gtcgaccgtg atctggtcgt tgcgatgcac gacgcaacgc
     2641 gcgccgaggt cgcccaggaa gtggacgagg ttgtaggtga agctgtcgta gttatcgatg
     2701 agcagaagca tgggatcatt ctaccggcga gggggttgtt ggggtagtgt tacaataaca
     2761 agacaagaaa gcctgatttg gtcgtcgaac ccctcatcgt cggtctgctg cttctggcag
     2821 cgctcatgca cgcgtcatgg aacgccatcc tgaaatccga cgagtcggat cgtctggcga
     2881 ctttcggcgt gatcatgacc accggcaccg tgatgggcct ttgtgccgtg ccgttcctgc
     2941 cgtggatcga tccggcggcg tggaaatatc tcgtctcctc cgtgctgatc cacgtcctct
     3001 attacacgtt cctgctaaaa gcctattctt acggtgatct cagccacacc tatccgatcg
     3061 cgcgcgggct gggaccgctg ctggtggcgc tggtgtcggg ccgcttcatc ggcgagcacc
     3121 tgcgcacgca ggatatcgtt ggcgtcctgc tgttgagctt cgggctggtc tcgctcgcca
     3181 tgccgctgcg caacgtcgtg ccgcggcctg gcagccgtca cggactcgcc acgctgttcg
     3241 ccgtgctgac aggcatcacc atcgccgcct acatcatcgc cgacggactg ggcgtgcgca
     3301 gcgccgggcc gaccttcgag catcgcctgt cctacatcgc ctggctctgc gtcgtggagg
     3361 gaccgtggct tctggtactg gcgatcgtca ttcggcccaa gagcgtgtgg acgcatctcc
     3421 ggcgcacctg gtggcgcggc gtgatgggcg gggtcatcgc caatgtcggt tacggaattg
     3481 cgatctatgc cctggtgctg gggccgatgg cccatgtcgc ggcgctgcgc gaaacttcag
     3541 tgctgtttgg cgcgttgatg ggcaccttgc tgctgggcga gccgttcggc gtccgccgcg
     3601 tggcggcggc tctcgtgatc gtcgtcgggc tggtgctgat gaacgggcca caactcatct
     3661 gagcggccgc agctcgacat cgagccgcgc caggcggtcg aacagcctgc agcgactgta
     3721 gatcggccac cacccgtaca ggaagatgtc gagcggtccc cacatcgcca cccatcccac
     3781 gatcaaaagc ccctccgaca gaacgtggga aagagggaac ggcgaggcgg ccaggacatt
     3841 acgcgtgagc aggcagaccg cgaggaacgc gaggccgacc agcaggctcg ttcgtccgcg
     3901 ccaccacatg ttcctgaggt ggcgccgttc gctgtcgcgg cgcagttcga agtggtggtg
     3961 gatggagacg gggacctgcg acgcttcggg ccgggccagt tcgtcatgcg gcagcatgat
     4021 caccagccgg atcggacggc tgccggcatc ttcggcggag ccgacgatgt agtcgtccgc
     4081 cgcggcttcc agttcctttt catggaaggg cgcgggatcg agcgaattgt acagacgcaa
     4141 gacgcgatcg aggcgcaatt cgactgcgac ggtgtcgacc ttgtctgttc cgggattcac
     4201 tgccatggct gatcgacgat tgtcggcgag ggcgcgaagc aatgtccacc cgcaacctcg
     4261 acaagatgat ggcgccccgg tcggtcgtgg cgatcggcgc cagcgcgcgg cccggttcgg
     4321 tcggtgctgc ggtcacgcgc aacctgctgg ccggcggctt ccagggcgag atccatctgg
     4381 tcaacatcaa gggcggcgac atcgaaggtc gtccggtgct caagagcctc gccgagctgc
     4441 cgcagccggc tgacctcgcg gtgatcatga cgccggccga gaccgtgccg cgcctggtcg
     4501 tcgagctcgg cgagcgcggc accaaggtcg cggtgatcat caccgccggt ccgggcgacg
     4561 gtgctgcggc gcacgacgac aacaagcgct ggcgcaagcg catcctgcgc gcggcccagc
     4621 cgcacctgct caggatcgtc gggccgaact gcatcggcta catggtgccg cggctcggcc
     4681 tgaacacgag cttcggaccg gctggcctga tatccggccg ggtggcggcg gtggcgcaat
     4741 cgggcgcggt gctggccggc ctggccgact ggggcaccgc ccagggcatc ggcttctcgc
     4801 acctgatctc gatgggcgac atgaccgacg tcgatttcgg cgacgtgctc gacatgctgt
     4861 cgcgcgacta cgagacccgc gccgtcctga tgtatgtcga gggcatcacg caggcgcgca
     4921 aattcatgtc ggcggcgcgc agcgtggcgc gcctgaaacc ggtgatcgcg ctcaaggcgg
     4981 gccgccacgc cgcggcggcc aaggcggcgg cctcgcacac cggctcgatg gcgggctcgg
     5041 ccgcggtcta tgacgcggcc ttcgcacggg ccggcttggt gcgcgtgcat ggcttgggcg
     5101 agctcttcga tgcggccgag acgctgggcc atggcatcac gccgcgcaac gagcggctgg
     5161 ccatcctgac caacggtggc ggcgtcggca tcatcgccac cgacctgctg atggacgaag
     5221 gcggtgagct tgccgcgctg cagcccagga ccgtcacgca gctcgacagg cacatgccgc
     5281 gcgcctggtc gcgcggcaat ccggtggaca tagtcggcga cgccgacggc gcgcgttacg
     5341 cggccgcggt cgatgcgctg gccgacgacc gcggcgtggg cgccgtgctg gcgatgaacg
     5401 tgccgaccgc actcacctcc tcggtcgaag ccgcccgcgc ggtgacgggc gcgccgggcg
     5461 ccaaggtcgt gccgctgatc ggttgctgga tcggcggacc gcaagcggag gcgggccgca
     5521 aggtgctgca cgaggccggc atcccggcct acgacacgcc gctgcgcgcg gtgcgcggct
     5581 tcatgcacat cgtgcaatac cggcgcggcc agcgcgccct gcaacgcacg ccgccatcgg
     5641 tgcccgaggc gcgctccgac agccagctgg tgcgcgccat cgtccacggc gccctggccg
     5701 agaagcgcaa ggtcctgacc gagcccgagg ccaagcgcgt gctggcggcc tacggcattc
     5761 ccgtcgtgcc gacggaggtc gtgctcgacg ccgccgaggc ggcgcacgcc gccgggcgca
     5821 tcggctttcc ggttgcggtc aagatcctgt cgcgcgagat cacgcacaag accgatgtcg
     5881 gcggcgtggc gctcgacctc ggctcggagc aggcagtgat ggatgccgtt cgcgccatgc
     5941 acgacaaggt ctgcaccgcc gcgcccggcg cccgggtcga cggcttcgtg gtccagccca
     6001 tgatcaagcg gccgcacgcg gtcgagctga tcctgggcgc ggccgaggat ccggtgttcg
     6061 ggccgatcct gctggtcggc cacggcggcg tggcggccga ggtgatcgac gacaaggctc
     6121 tcgccttgcc gcctctcgat cccgtcctgg cggaagatgc cttgagccgc acccgcgtcg
     6181 accgcctgct gcgcggctat cgcgaccggg cgccggccgc gcgcggggcg gtgtgcgatg
     6241 ccatggtgcg gctgtcgcag ctcatcgccg acgtcggcga gattgccgaa ctcgacatca
     6301 atcctctgct ggccgatgcc gacggtgtga tcgcgctcga tgcacgcatc gttgtcgcgg
     6361 cacccgaggg gcgggaacgg gccgcgcgct tcgccatcaa gccctatccc gtggaactcg
     6421 aaaccgaggt cgcgcacggc gaggagaggt tgaggctgcg gccgatccgg cccgacgacg
     6481 aggcgctgct tcaggcgttc acacgacggc tgacgccgga agacatccgc atgcgtttct
     6541 tcggaccgat gcgcgagctc agccacgaga tggcggcgcg actgacgcaa atcgactatg
     6601 accgcgagat ggcgtttctg ctgctcgacg gcaaggagct tttaggcgta gggcggctgg
     6661 ccgccgatcc cggcttcgag caggcggagt tcgccttgat cgtggcgtcg gaccgacagg
     6721 ggcgcggcta cggcagcctg ctgctcaatc acgtgctgca ttatgcgaag gcgcgcggcg
     6781 tccaacgagt cgtcggccag gtgctgcgcg agaaccacaa gatgctcgag ctcaccaagc
     6841 gactgggctt caagcgtgaa ggcggccgct cgggagaggc cgacattcgt gtggtgaagc
     6901 tcacctcctc tctgtaacct ttgttttgtc ggccgttctg aactaaggcg aaagaaaggc
     6961 ggctggccaa ggcgttaagg ccgaatgttc agatggcgtc gaggaagaac agaagcagga
     7021 aggcgaacag aaagagtccg aaaacggctc cctctgcccg cgaccgcgtc gtgcagcgat
     7081 ttggcgccat catcgcctgg atcgacgccc atcgctggca ttcgatcgtc gccggcctgg
     7141 tgctgctgtt tgtcgccagc ctgttcggcg gctactggat cgccgagcgc ctcgaatcga
     7201 gagatggcga tcgcctggcg cgcgacacgc tggaggagat gaagcgcagc gcgacgacgg
     7261 agaccgcccc acgatacgcg cgcatcgaag atcttcccgg cctgccgaaa tacaccgatg
     7321 cggagcccgg ccagccgcgc gtcactttgg aggagaagcc gcgcgcgacc aagccgcagc
     7381 agctcgcggc ggccgtctcg agtgccgaga catggcgcaa gaatgccgtg ccgtttgccg
     7441 acctcaacag tcggccgctg gtggccatcg tcatcgatga cgtcggcatc gatcggccgc
     7501 ggtcgaagcg tgcctgggag ctggctggcc cgcttacgat gtcgttcctg ccctacgcca
     7561 aggatctgcg cgagcaggcg cggaccgcgc gggcgcgcgg ccatgagctg atgctgcact
     7621 tgccgatgga acccaacggc cgcaacgacc ccggcccgaa cgctctgctg gtgtcgctgc
     7681 ccgattcaga gctgcgccag cgcacggtgg cggcgctcga cagtttcgac ggctatgccg
     7741 gcgtcaacaa tcacatgggc agccgcttca ccgcctttcg gcccggcatg gagacggtgc
     7801 tgcgccagtt caagggacgc gggctgatgt tcctggactc gcgcacgacg gcgcagtcgg
     7861 tcggcgatca ggtggcgcag gagatcggcc tgcccggcat ggtgcgccat gtcttcctcg
     7921 acgacgacga gtcgctggag tcggtgcggc gcaagctggc cgagacggaa gccatggcgc
     7981 gccggcaagg cttcgtggtg gcgatcggcc atccgcacga gacgaccctg caggcgctcg
     8041 gcgaatggct gcccggcctt ccggccaagg gtcttgcgct ggcgccggcc accgcggtgt
     8101 tgcgcaagcg caatggttgg gattgaagtg cttggcgaca cccaaggtgg atgtgattga
     8161 caagccacgg accctgcgca actattgcgt gtaagatggc ttgcgatgct attttagggg
     8221 gtgcaaatgc cggaattcct gattcttcgc aatgccgcag cccgatccac ggtcagcggc
     8281 ttggaaagct tcggtcccgc gatggcctct gcggcgccga cgccgcccct gccgcagatc
     8341 gaaacgcatg acatctcctt gagagaggcg atgagcgccg ctcgcgatcc cgatgtcgct
     8401 gcggtcgcca tcccgatgcc gatcaagttg atcatgccgt tcgacgtagc ggcgggagcc
     8461 gcggcggcag gtgacgcctg gggcatttcc gccgtcaagg ccgacacttc gccgatgacg
     8521 ggggacggcg tggttgtcgc ggtgttggac accggcatcg acaaagcgca cccggccttt
     8581 gccggagtcg agatcattga gaaggacttc agcggctccg gcgacggtga ccggcagggg
     8641 catggatcgc actgcgcggg aaccatcttt ggccgcgacg tggacggcaa acgcatcggc
     8701 atcgctcgcg gcgtcaagaa agcgctgatc ggaaaagtcc tcagcgacac cggcggcggc
     8761 acctccgaca tgatcttccg cggcatccaa tgggcactcg accagggggc tcatgtgatt
     8821 tcgatgtcgc tcggcttcga cttccccggc gcggtcaagc gcatggagga ctccggcctg
     8881 ccgacccaac ccgcggtatc caacgcgctc gaagcgtatc gatccaatct gcgcttcttc
     8941 gatgcgctga tgcagatggt caaggcgcag gcggcatttc gcgacactgc cgtggtggtg
     9001 gcggcgaccg gcaacgagag caacagaagt gccccgcggc cgtacacgat ttccgcgtcc
     9061 ttgccggcgg cgtccgacgg cgtcgtctcc gtggccgcac tcggccccga cggcggtggg
     9121 aaattcaaca tcgcgccgtt ttcgaacacc atggcgcaag tggcggctcc cggcgtcgac
     9181 atcctgtcgg tcaaaatcgg cggcggtttg cggaccctga gcgggaccag catggcctgc
     9241 ccgcacgtcg cgggcgtttc cgccctgtgg tggcaggcat tgcggtcggg cggcgccgtt
     9301 cggccgagcg ccagcctggt gaccgccaat cttatcgcgc gctcccgtac ggacgtgctg
     9361 gcggccggcg ttacgccgga ggatcgtggc ggcgggatgg tgacggcgcc gcaaccgtaa
     9421 taggcggcgc cggccacggt tggccacggc ccggtttgca aggctatcat tgtctccttc
     9481 gagaacaccg atcggaggaa acagaccgtg cgctacgcca agaaggcgat gatcgtcgcc
     9541 ccgcagcccg agcccgcgga agcgggcgcc gatgtgctgc gcgagggcgg caacgccgtc
     9601 gatgccggca tcgcctgcgc gctggtgcag ggcgtggtcg atccactgat gtgcggcatc
     9661 gcgggcttcg gcagctgcgg catctacatg ccgggcaaga agttccatgg ctacatcgac
     9721 gcccatgcgc cggcgccgct cggcgcgcgg cccgacatgt gggccaactt gatcgagagc
     9781 gaggcgcgcg acggctacgg cttcatcctg aagggcaggc tcaacgacat cggctacaag
     9841 tcgatctgcg cgccggccaa cctcaagatg tattacgagg cgcacaagga gcatggcagc
     9901 ctgccgtggt cgcgcatcgt cgagccggcc attgcctggg cggagaacgg ctggacggtg
     9961 cggccgcacg ttcactactg gtggtcggac gaaggcgcct tcggccgcgc gcccaattgg
    10021 gagcgcacca gcttcaccga ggcggcacgt gcgctgtatt gccgggccga tggcagcccc
    10081 aagcgcgtcg gcgaccgggt cgtcaatcgc gactatgcgc aaaccctgcg cgccatcgcc
    10141 aagggcggcg ccgatgtctt ctattccggc gagctcgcac gggcgatcgc cgaggacatg
    10201 aagaagaacg aggcgctgct ctcgatcgac gaccttttag cgtggaagcc ggtcagaaac
    10261 ccgccgctgt ggggcgacta tcgcggctac gcggtgtcga ccaatcagcc accgggcggc
    10321 ggcgtgatgc ttttagagat gttgaacatc ctggagaatt tcgacctttc agcgatggag
    10381 cacaattcaa gggagtacct gcgcgtggtg agcgaggcga tgaagcgcgc caccatcgac
    10441 aaggacgcgc atgtcggcga tcccaagttc gtcgacgtgc cggtcgatcg gctgacctcg
    10501 aaatcctatg ccaagaccat ggcgggcgag atcgtgcgcg gcgtgaaggc tccagtgccg
    10561 cgctttaatt ccggcgcggt ctccaaggac accacgcaca tctcggtgct cgacaaggac
    10621 ggcaactgct tttcgatgac ccattcgctc ggcatgccgt cgggcgtggt cacgccgggt
    10681 cttggcttca tgtacaacgg ctgcatgggc gtgttcgacc cgcggccggg ccgggcagga
    10741 tcgatcgcgc cgggcaaggc gcgcttcagc tcggtcgtgc cgtcgatcgt cttcaaggac
    10801 ggcaagccgc acctcatcat cggcgcgccg ggcgccaccc agatcgccat gggcgtgctg
    10861 cacgtgatcc tgaacgcgct cgacttcgac atgaccatgg tcgaggcggt gagcgcgccg
    10921 cgcttctcgg cgacctccga tacgatcgac atttcgaacc gcatcccatg gaaggtcgag
    10981 cgcgagctgc aggccgaggg ttacccggtc gtgcgcagcc cctacacctt cggcttcgcc
    11041 gccgtccacg ccattcgcgt gcacgaggac gggctggatg gcggcgccga ccctggccac
    11101 gacggtgtgg taattgccac ataatcttgg gttgagcggt gtcaccttga tcgcattgca
    11161 agatgatcaa ggaggggact atgccaggcg tgg
//
LOCUS       DASWGA010000325         2158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2180188, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000325 DASWGA010000000
VERSION     DASWGA010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2180188"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /gene="apaG"
                     /locus_tag="VF991_07890"
     CDS             <1..342
                     /gene="apaG"
                     /locus_tag="VF991_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HEX9556400.1"
                     /translation="LPDQSDPDKSQFVWAYQVRIENKGDIAVQLRSRHWKITDALGRL
                     QEFKGPGVVGKTPMLRPGEMFEYTSHTPLSTPWGFMGGSYQMVSESGENFDIEIPTFS
                     LDTPAAERRLN"
     gene            374..1000
                     /gene="folE"
                     /locus_tag="VF991_07895"
     CDS             374..1000
                     /gene="folE"
                     /locus_tag="VF991_07895"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEX9556401.1"
                     /translation="MNRMLKKGEMVSLATGLARPSREEAEAAVRTLLRWAGDDPEREG
                     LVGTPDRVVRSYEEFFSGYEQDPRDMLQRTFEEVEGYDEVVVLRDIRLESHCEHHMVP
                     IIGKVHVGYLPDRRVVGISKLARVVDAFAHRLQIQEKLTAQIANTMQEVLQPRGVAVV
                     IEAAHQCMTTRGVHKSDVAMVTSRMLGAFRDNGDTRREFLTMIGRTSI"
     gene            1017..>2158
                     /gene="argE"
                     /locus_tag="VF991_07900"
     CDS             1017..>2158
                     /gene="argE"
                     /locus_tag="VF991_07900"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008777 - acetylornithine deacetylase
                     activity [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HEX9556402.1"
                     /translation="MAGEIVGSVEMLRRLVAFDTTSRNSNLALIEYVKSYFQEHGIAA
                     KLVPSEDGKKANLFATIGPNVKDGVVLSGHTDVVPVDGQPWDTDPWTLTLKDGKYYGR
                     GTCDMKAFYAIGLAMLPEFNKARLKKPIHFALSYDEEVGCIGAHALAARMASEVPRPR
                     AIIIGEPTMMTVVHAHKGAQIYVTKFTGFEAHSSMTHLGVSAIHFAGEFVHYLNELQD
                     ELDAKAPRKSEFMPPAATFNVGTILGGTAGNILARDCEVLWGYRELPTEPIEALGKRA
                     TDWLEKQLLPRMKAKHPAATIATELRSSTPAFSPEGNDEAKTLAGTWSGSNTVGSVVY
                     ATEAGIFRKTLGVPTVVCGPGDIAQAHQPNEFILASQIDACEGFMRR"
BASE COUNT          409 a          717 c          687 g          345 t
ORIGIN      
        1 ctgcctgacc agtccgaccc ggacaaatcc cagttcgttt gggcctacca ggtgcgcatc
       61 gaaaacaaag gcgatatcgc ggtgcagttg cgcagccgtc attggaagat caccgacgcg
      121 ctcggccgcc tgcaggagtt caaggggccc ggcgtggtcg gcaagacgcc gatgctgcgt
      181 ccgggcgaga tgttcgagta cacttcccac acgccgctct ccacgccctg gggcttcatg
      241 ggcggctcgt accagatggt gagcgaatcg ggcgagaact tcgacatcga gattccgacc
      301 ttttcgctcg acacgcccgc cgccgagcgc cgtctcaact gagccgatat cgagagagcc
      361 gagaggagct gcgatgaaca ggatgctgaa gaagggcgag atggtctcgc tcgccaccgg
      421 actggcgcgt ccctcgcgcg aggaagccga agccgcggtc cgcacgttgc tgcgctgggc
      481 gggcgacgat cccgagcgcg agggcctggt cggcacgccc gatcgtgtcg tgcgctccta
      541 cgaggaattc ttttccggct acgagcagga tccgcgtgac atgctgcagc ggaccttcga
      601 ggaggtcgag ggctacgacg aggtcgtggt gctgcgcgac atccgcctcg aatcgcactg
      661 cgagcaccac atggtgccga tcatcggcaa ggttcatgtc ggttacctgc ccgacaggcg
      721 cgtcgtcggc atcagcaagc tggcgcgtgt ggtcgacgcc ttcgcccatc gcctgcagat
      781 ccaggagaag ctcacggccc agatcgccaa tacgatgcag gaggtcctgc agccgcgcgg
      841 cgtcgccgtc gtcatcgagg cggctcacca atgcatgacc acgcgcggcg tgcacaagtc
      901 cgacgtcgcc atggtgacca gccgcatgct gggcgccttc cgcgacaacg gcgacacccg
      961 ccgcgaattc ctgaccatga tcggcaggac gtccatttga gtgaacaagg agtatcatgg
     1021 caggagagat cgtcggctcg gttgaaatgc tgcgccgtct cgtggcgttc gacaccacgt
     1081 cgcgcaattc caacctggcg ctgatcgaat acgtcaaaag ctattttcag gaacacggca
     1141 tcgcggccaa gctggtcccc agcgaggacg gcaagaaagc caacctgttc gccaccatcg
     1201 gtcccaacgt gaaggacggc gtcgtcttga gcggccacac cgacgtggtg ccggtcgacg
     1261 gccagccgtg ggacaccgac ccgtggacgc tcacgctcaa ggacggcaaa tactacggcc
     1321 gcggcacctg cgacatgaag gcgttctacg ccatcggctt ggccatgctg cccgagttca
     1381 acaaggccag gctgaaaaag ccgatccact ttgcgctctc ctacgacgag gaggtcggct
     1441 gcatcggcgc ccatgcgctg gctgcccgca tggcaagcga agtgccgcgc ccgcgtgcca
     1501 tcatcatcgg cgagccgacg atgatgaccg tggtccacgc ccacaagggt gcgcagatct
     1561 acgtcaccaa gttcaccggc ttcgaggcgc attcctcgat gactcatctc ggcgtcagtg
     1621 ccatccattt cgccggcgaa ttcgttcact atctgaacga gctgcaggac gagctcgacg
     1681 ccaaggcacc caggaagagt gaattcatgc cgccggccgc gaccttcaat gtcggcacca
     1741 tcttgggcgg cacggcgggc aacatcctgg cgcgcgactg cgaggtgctg tggggctatc
     1801 gcgagctgcc gaccgagccg atcgaggcgc tgggcaagcg cgccaccgac tggctggaga
     1861 agcagctttt gccccgcatg aaggccaagc atccggcggc caccatcgcc accgagctgc
     1921 gctcctcgac gcccgccttc tcgcccgagg gcaacgacga ggccaagacg ctggccggca
     1981 cctggtcggg ctccaacacg gtgggcagcg tggtctacgc caccgaggcc ggcatcttcc
     2041 gcaagacgct cggcgtgccg accgtggtgt gcgggccggg cgacatcgcc caggcgcacc
     2101 agcccaacga gttcatcctc gcctcgcaga tcgacgcctg cgagggcttc atgcggcg
//
LOCUS       DASWGA010000326         3978 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1806673, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000326 DASWGA010000000
VERSION     DASWGA010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3978
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806673"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..785
                     /gene="tpiA"
                     /locus_tag="VF991_07905"
     CDS             30..785
                     /gene="tpiA"
                     /locus_tag="VF991_07905"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEX9556403.1"
                     /translation="MARVRQPLIAGNWKMNGLRADALALAKGVADGVKQAGWTDREVL
                     VCPPATLILAVAEAVKTSRVLVGGQTCHAKPSGAHTGEIAAEMLRDCGASHVIVGHSE
                     RRADCGETDAIVRAKAEAAWRAGLLPIVCIGETLAEREAGRTLDVLARQLKGSVPAGA
                     TAAKLVVAYEPVWAIGTGKTPTTPEVAAAHAHIRKVLGGLMGEAAAVRLLYGGSVKDS
                     NAAELLAAGDVDGALVGGASLKAGEFLAIAKAV"
     gene            849..1232
                     /gene="secG"
                     /locus_tag="VF991_07910"
     CDS             849..1232
                     /gene="secG"
                     /locus_tag="VF991_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEX9556404.1"
                     /translation="MDAVRGFLHDWRLVLLIIHVGVTAAMIVVILLQRSEGGGLGMGR
                     TDALFSVRGQANVLSRMTAIFAGIFFFLSLVMAWSMTDPSRAARSIMDRVPATPAAPA
                     APGSAAPGGAVPAPAAPAQPSAPTR"
     gene            1348..2979
                     /locus_tag="VF991_07915"
     CDS             1348..2979
                     /locus_tag="VF991_07915"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018267641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEX9556405.1"
                     /translation="MTRFIFITGGVVSSLGKGLSSAALGALLQARGHRVRLRKLDPYL
                     NVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGVDARQSDNITTGRIYSTVIAKE
                     RRGEYLGATVQVIPHITDAIKEFIVADTEQEEFVLVEIGGTVGDIEGLPFLEAIRQLG
                     NELGRERTMYVHLTLLPCVPTAGELKTKPTQHSVKELLSVGIQPDLLVCRSGDKEIPA
                     NERRKIALFCNVKPERVIEARDVDTIYQVPIAYHDQGFDREVCRYFGIDADDEPNLER
                     WRGVVRSVREPEGKVTIAVVGKYTVLLDAYKSLSEALTHGGFGCNVKVGLEWMDSEIF
                     ERDDAVSHLEHVNGILVPGGFGERGTEGKIHAVQFARERRVPFFGICFGMQMAVIEAA
                     RNLLGIEHASSSEFGPTEHAVVGLMTEWIKGNQLERRAANGNLGGTMRLGAYPAHLRP
                     GTKVHEIYEQDVISERHRHRYEVNVNYKDRLEQVGLRFSGMSPDGILPEIVEIPDHPW
                     FIGVQYHPELKSRPFAPHPLFTSFIGAAKNQSRLV"
     gene            3023..3775
                     /locus_tag="VF991_07920"
     CDS             3023..3775
                     /locus_tag="VF991_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556406.1"
                     /translation="MNRLFALVLLVVTAVAAAAAAQPSPSKAERRDPIFLRFPEMAER
                     YWVNSETYTASHKVVAVPMPRQCAFLYADSYSKGQMSESEVQQMAVSNCNRKLSELGP
                     LGENYSADCRCQVVINNERYVVPRSALPDDSYGPVSIFYRDDRGNMARLNGLAKYGAL
                     IGRDRSVKFTVENPRGEQVCEGTFTNDGPASGLFSLSCFGGKFTGSGNYQSKAGAPND
                     HIIARGQTGRGLPVVMVIGLPAQLATASYGAI"
     gene            3777..>3978
                     /locus_tag="VF991_07925"
     CDS             3777..>3978
                     /locus_tag="VF991_07925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556407.1"
                     /translation="MRRTLALLILAGLAPATALAQSAGEVERCFQNPAVCGQGGGGVA
                     PAPTGGAPVAATRPAAPAAPAPD"
BASE COUNT          664 a         1334 c         1331 g          649 t
ORIGIN      
        1 cacgccagcg gcacatccag gggaatttca tggcgcgcgt gagacagccg ctgatcgccg
       61 gcaactggaa gatgaatggt ctgcgggccg acgctctggc gctcgccaag ggtgtggcag
      121 acggcgtgaa gcaggccggc tggaccgacc gcgaggtgtt ggtctgcccg ccggcgactc
      181 tcatcctggc ggtggccgag gcggtgaaga caagccgcgt cttggtcggt ggccagacct
      241 gccatgccaa gccgagcggc gcccataccg gcgagatcgc cgccgaaatg ctgcgcgatt
      301 gcggcgccag tcacgtgatc gtcgggcact ccgagcgccg tgccgattgc ggcgagaccg
      361 acgcgattgt gcgtgccaag gccgaggcgg cgtggcgcgc cgggctgctg ccgatcgtct
      421 gtatcggcga gacgctggcc gagcgcgagg ccggcaggac gcttgacgtg ctcgcgaggc
      481 agctcaaggg cagcgtcccg gccggcgcca ccgcggccaa gctggtcgtg gcctatgagc
      541 cggtctgggc gatcggcacg ggcaagacgc cgaccacccc ggaagtcgcc gcagcccatg
      601 cgcatattcg caaggtgctg ggtggactga tgggcgaggc ggctgcggtt cgacttcttt
      661 atggcggctc ggtgaaggac agcaatgccg ccgaattgct ggcggcgggc gacgtcgacg
      721 gcgccctggt gggcggcgcc agcctcaagg caggcgaatt tttggctatc gccaaggccg
      781 tttaaagcgg ctagaagcgc ccgcttggcg agtattcgca tgggcattcc gaccgggcgc
      841 tgaacgaaat ggacgcggta agaggctttt tgcacgactg gcggctggtg ctgctgatca
      901 tccatgtcgg cgtcacggcg gcgatgatcg tcgtcatcct gctccagcgc agcgaaggcg
      961 gtggcctggg catgggccgc accgacgcgc tgttctcggt gcgcggccag gccaatgtcc
     1021 tgtcacgcat gacggcgatc ttcgccggca ttttcttttt cctcagcctg gtgatggcct
     1081 ggagcatgac cgatccgtcg cgggcggcgc gctcgatcat ggaccgcgtg ccggcgacgc
     1141 ccgccgcgcc cgcagcaccg ggaagcgcgg cgccgggagg tgccgttccc gcaccggcag
     1201 cgcccgctca accctccgcc ccaactcgct agacaactgg cccgctagga acaagcgccg
     1261 tggccgaccg ttccctccgc cgaccctctt ccggcggtgc aatatcccca tggctgcggc
     1321 ccgcaagatt cagtatgctg taagcccatg acgcgcttta tatttataac gggcggcgtg
     1381 gtttcctcgc taggtaaagg tctttcgtcg gcggcgctgg gcgcgctgtt gcaggcgcgc
     1441 ggccatcgcg tccggctgcg caagctcgat ccctacctca acgtcgatcc cgggacgatg
     1501 agcccctatc agcacggcga ggtcttcgtg accgacgatg gggcggaaac cgacctcgac
     1561 ctcggccatt acgagcgctt caccggcgtc gatgcgcggc agagcgacaa catcacgacc
     1621 ggccgcatct attcgaccgt gatcgccaag gagcggcgcg gcgaatatct cggcgccacc
     1681 gtgcaggtga tcccgcacat caccgacgcc atcaaggagt tcatcgtcgc cgacaccgag
     1741 caggaggagt tcgtcctggt cgagatcggc ggcaccgtcg gcgacatcga gggcctgccg
     1801 ttcctcgagg caatccgcca gcttggcaac gagctcggcc gcgagcgcac gatgtacgtg
     1861 catctcaccc tgctgccctg cgtgccgacc gcgggcgagc tcaagaccaa gccgacccag
     1921 cattcggtca aggaactttt aagcgtcggc atccagcccg acctgctggt gtgccgcagc
     1981 ggcgacaagg agatcccggc caacgagcgg cgcaagatcg cgctgttctg caacgtcaag
     2041 cccgagcgtg tgatcgaggc gcgcgacgtc gacacgatct atcaggtgcc gatcgcctac
     2101 cacgaccagg gcttcgaccg cgaggtctgc cgctatttcg gcatcgatgc cgacgacgaa
     2161 cccaacctcg agcgttggcg cggcgtggtg cgctcggtgc gcgagcccga gggcaaggtg
     2221 acgattgccg tggtcggcaa gtacacggtg ctgctcgacg cctacaagtc gctctccgag
     2281 gcgctgacgc atggcggctt cggctgcaac gtcaaggtcg gcctggagtg gatggactcc
     2341 gagatcttcg agcgcgacga tgccgtcagc catctcgagc acgtcaacgg catcctggtg
     2401 cccggcggct tcggcgagcg cggcaccgag ggcaagatcc acgccgtcca gttcgcgcgc
     2461 gaacgcaggg tgccgttctt cggcatctgc ttcggcatgc agatggcggt gatcgaggcc
     2521 gcccgcaacc tgctcggcat agaacacgcc tcgtcgagcg agttcggtcc gacggagcac
     2581 gccgtggtcg gcctgatgac ggagtggatc aagggcaacc agctcgaaag gcgcgccgcc
     2641 aacggcaacc tgggcggcac gatgcggctt ggcgcctacc cggcgcatct caggcccggt
     2701 accaaggtgc acgagatcta cgagcaggac gtgatcagcg aacgccaccg tcaccgctac
     2761 gaggtcaacg tcaactataa ggaccggctg gagcaggtcg ggctgcgctt ctccggcatg
     2821 tcgcccgacg gcatcctgcc cgaaatcgtc gaaatccccg accatccctg gttcatcggc
     2881 gtgcagtacc atcctgagct gaaatcccgg ccattcgcgc cccatccgct gttcacctcc
     2941 ttcatcggcg ccgccaagaa tcagagccgg ctggtctagc gggtcgtatt tcggtcatgt
     3001 ttctcggctc gaatcgggtg tcatgaaccg cctttttgcc ctcgttctcc tggtcgtcac
     3061 ggccgtcgcc gcggccgccg cggcgcagcc ctccccaagc aaagcggagc ggcgcgatcc
     3121 gatcttcctg cgctttcccg agatggccga acgctactgg gtcaacagcg agacctacac
     3181 ggcgagccac aaggtggtcg cggtgccgat gccgcgccag tgcgccttcc tctatgccga
     3241 ttcctattcc aaggggcaga tgagcgagag cgaagtgcag cagatggccg tctcgaactg
     3301 caatcgcaag ctcagcgagc tcggcccgct cggcgagaac tacagcgctg attgccgctg
     3361 ccaggtcgtg atcaacaatg agcgctatgt cgtgccgcgc agcgcgctgc ccgacgattc
     3421 ctacggaccg gtgtcgatct tctatcgcga cgaccgcgga aacatggcgc gcctgaacgg
     3481 actcgccaaa tacggcgccc tgatcggccg cgatcgttcg gtcaagttca cggtcgaaaa
     3541 cccgcgcggc gagcaggtct gcgagggcac cttcaccaat gacgggccgg ccagcggcct
     3601 gttctcgctg tcgtgctttg gcggcaagtt caccggcagt ggcaattatc agagcaaggc
     3661 gggcgcgccc aacgaccaca tcatcgcgcg cggccagacg gggcgcggcc tgcccgtggt
     3721 gatggtgatc gggctgcccg cgcagcttgc caccgcgagc tacggcgcca tctgacatgc
     3781 gccgcaccct cgctctgttg attctcgccg gccttgcgcc ggcgacggcg ctggcccaga
     3841 gcgcgggcga ggtcgagcgc tgcttccaga atcccgcggt ctgcggccag ggcggtggcg
     3901 gcgttgcgcc ggcgccgacc ggcggcgccc ccgtcgcggc aacgcggccg gccgcaccgg
     3961 cggcgccggc gccggatt
//
LOCUS       DASWGA010000327        10048 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_43224, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000327 DASWGA010000000
VERSION     DASWGA010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10048
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43224"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..453
                     /locus_tag="VF991_07930"
     CDS             49..453
                     /locus_tag="VF991_07930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010970222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX9556408.1"
                     /translation="MRNTYRGGCHCGAVRFECEIDPAEGTSRCNCSMCAKGRFWKAIA
                     RKDAFRLLQGEDALSDYRFGSRTIRHAFCRHCGIKPFGQGDMEALGGIFYAVNVACLD
                     GAAPEEMAAGPIVCQDGKNNAWDKAPSETRHL"
     gene            complement(461..1609)
                     /locus_tag="VF991_07935"
     CDS             complement(461..1609)
                     /locus_tag="VF991_07935"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9556409.1"
                     /translation="MLPCQRALFDIPRDVCFLNAASWSPLPLAVQEAGRAAVARKGQP
                     WKLESNFQSQQYERARKAAAALIGADPVDVALIPSVGYGVATAGKVMAIPRGSRVLVL
                     QDDHTSPVLEWMSRAQAGGFAVETVKQPGDGDWTSAVGEAIERAEAAPLALVSISSVH
                     WSDGGALDMARISQAAKDKGAALLVDATHDVGVRRIDVKALDPDFLIFPTYKWVLGPY
                     GRAFMYVARRRQDRVPLEQTAAARKAVSAEDTIYFRDIAYAEGARRYDMGERDHFISM
                     EMAAVGMEMMAGWGNAAIVARLSMLTDRLADGLANSGVRVIDKKLRAPHVLSLQFPQG
                     MAQDLPKKLAAENVYAAPRLGRLRISPHVYNDEEDVERFVEVFRKVGL"
     gene            1856..2101
                     /locus_tag="VF991_07940"
     CDS             1856..2101
                     /locus_tag="VF991_07940"
                     /inference="COORDINATES: protein motif:HMM:NF018294.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HEX9556410.1"
                     /translation="MSYQSRQRIAEQAVAFVTPVPPRLSLADRLAATLTLWRERSTAR
                     RYLAAMDARSLRDAGISPAAAAYESGKSFWQPFGPLR"
     gene            2271..3026
                     /gene="otsB"
                     /locus_tag="VF991_07945"
     CDS             2271..3026
                     /gene="otsB"
                     /locus_tag="VF991_07945"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HEX9556411.1"
                     /translation="MVPPDLDRTNALFLDLDGTLLEIAPTPELVVVPPGLPDLLTNVH
                     GQLGGAVAIVTGRPIGVIDRLLAPFHASAAGEHGVALRYQDGTVEEMPKGLAVPDTWR
                     DALKAAAERWPGVLVEPKPHGVAVHYRLVPERGNDVWRLVRALVPQDHPWFRLIPARE
                     AVEIGPRAASKGHAVERLMAQAPFRGRRPIFVGDDFTDEAGMEAARQFGGEGLRVAEV
                     FGGEPAAVRAWLRRGAELLGGRAVPPSPVGVSP"
     gene            3037..4836
                     /locus_tag="VF991_07950"
     CDS             3037..4836
                     /locus_tag="VF991_07950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEX9556412.1"
                     /translation="MSSLDLGVVGNCSIASLIDRNGRHVWHGLQRLDGDPVFNALLGG
                     KEPQSGFMDVVVAGTKESHQRYLHNTAILETTIDGAAGSVRLVDFAPRFRRFGRMFRP
                     PMLVRLMEPVAGRPRVTVRLRPTFDYGARKAQLTSGSNHARFFSDTAVLRLTTDASIN
                     NVLHEAEFSLDRPITLIVGADESVPENPDALARSFLAETESYWHTWVRDLNVPFDFQQ
                     AVIRAGITLKLCSYEDTGAVLAALTTSIPEAPDTSRTWDYRFTWLRDAFFTVNALNRL
                     SATRTMERYVRFIVDIVEAGSSKGEVAAIAPLFPIAPGTDTTERLIDSLPGYRGYGPV
                     RIGNAAVVQRQNDTYGSMVLTAAQMFWDERLPRQGDLELYRQLCVVGNEAQRAALTPD
                     AGLWEYREREEVHTFSATMCWAAQYRLGLIAKRVGMDAESREWLARAGVLRQEVLQRG
                     TTQEGWLSGVLDRDMLDASSLVLPEIGLLSSDDPRFHATIDVAGKRLMKNGFLMRYRE
                     SDDFGKPSNAFLLCTFWYIDALASVGRRPEALELFNNLLARRNHVGLLSEDIDPRSGE
                     LWGNFPQTYSQVGLILSAMRLSRSWEEGLWHAS"
     gene            4821..6206
                     /locus_tag="VF991_07955"
     CDS             4821..6206
                     /locus_tag="VF991_07955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HEX9556413.1"
                     /translation="MARLIIVSNRVPIPKARSTAAGGLAVALHDLLIPGAMWFGWSGR
                     LTAEPSLLPALVEARGVTYATVDLTAEAHRAFYVGFANGALWPLLHFRLGLMHFRRED
                     YLGYLAVNETFALALSQVVQPDDTVWAHDYHLLPFGRMLRRHGFAGPLGFFLHVPFVP
                     PSMLEAMPVARELVADLCAYDLLGFQTEEHARDFRDCAHRMLGATVDGEWVKLNGRRT
                     RVFANPIGINAQAFAEEAERAANDRLVQRVAGSLVGRMLAIGVDRMDYSKGLPNRFEA
                     YGRLLERHPEHRRRIHFLQICPRSREEVDEYRKLRAELDRLTGRINGRFSEFDWTPLR
                     YSTRPAPRPTLAGLFRIGRIGVVTPLRDGMNLVAKEFVAAQPDEDPGVLVLSQFAGAA
                     HELTEALIVNPFDPDAIAEAMHVGLTMPLGERRERQTALKAKVFRTTADLFCRRFIDA
                     LTAPTLTRVAA"
     gene            complement(6308..6427)
                     /locus_tag="VF991_07960"
                     /pseudo
     CDS             complement(6308..6427)
                     /locus_tag="VF991_07960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511977.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
     gene            complement(6500..6886)
                     /locus_tag="VF991_07965"
     CDS             complement(6500..6886)
                     /locus_tag="VF991_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX9556414.1"
                     /translation="MRLLLDTHAFLWWLAGHSSLPKRVRTEIDSSGSEVFVSAASAWE
                     IATKHRLGKLPEAELVAIDVMSAIESQQFIALAVSVHHGQAAGALPGLHRDPFDRMLI
                     AQAIIEDLTLASNERAFDAYGIRRFW"
     gene            complement(6890..7123)
                     /locus_tag="VF991_07970"
     CDS             complement(6890..7123)
                     /locus_tag="VF991_07970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HEX9556415.1"
                     /translation="MPTYTIHAAKTNLSKLVARAEAGEEIVLARGKDPVARIVPVTPK
                     AKPKRKFGALKGKIKIGPEFFEPLPEEELKLWE"
     gene            complement(7156..7335)
                     /locus_tag="VF991_07975"
     CDS             complement(7156..7335)
                     /locus_tag="VF991_07975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556416.1"
                     /translation="MDLAYSVLGPLGRPRRADDSLTIAGGDDPVFVTPWRIAQTPPYF
                     AKPAEPLGTSPVRWA"
     gene            complement(7338..8051)
                     /locus_tag="VF991_07980"
     CDS             complement(7338..8051)
                     /locus_tag="VF991_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556417.1"
                     /translation="MATIVLAHGAWSAAWAWKKMRPLFGAAGHEFFSPTYTGLGERAH
                     LAHPDIDLSTHVQDVTAVLEFEDLTDVTLLGHSYGGMVATGVADRVPGRLARVVYIDA
                     FAPQDGQSLFDLVGPKAEANMRAGALKDGEGWKLPINPMPTDTAPEDLAWASPRRHPQ
                     PIKTFEQKLRLESKQPPPPRHYIYAKRNGPGDVFRQFGERARSEAAWKYYEIDASHNP
                     HITCPDVLMALLANIMAGP"
     gene            8111..8389
                     /locus_tag="VF991_07985"
     CDS             8111..8389
                     /locus_tag="VF991_07985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HEX9556418.1"
                     /translation="MTSRPTIALGNARVGFRGRIHALCVKGASAGLPEPELERRLIEL
                     GFVEGASVELLHQGLFGSDPIAVRVAHATIALRRREAMAILVNAEAPA"
     gene            8386..>10048
                     /locus_tag="VF991_07990"
     CDS             8386..>10048
                     /locus_tag="VF991_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter B"
                     /protein_id="HEX9556419.1"
                     /translation="MNVASNLAPIVALVGNPNCGKTALFNALTGGRQKVANYPGVTVE
                     KKVGRVVTPAGRAVRIVDLPGTYSLRARSPDEEITRDVVLGKLTGEGAPDLIVCVGDA
                     SNLRLALRLALELKKVGRPVVLALNMMDIARKRGIEIDTEKLARELGVPVVQSVAVRR
                     GGTSALLGEIDRLLKSLPAIGAADWRAPDAGELRGGQHEADRVLRAAVKSSGERDRGT
                     VAADAVLLHPVAGLVILLAILFVMFQAVFAWARPLMDVIQQGFAWLGAGVGISPLPDL
                     LKSFLKDGLISGVGSVVVFLPQIVILFFFILLLEDLGYMARAAFLMDRIMGGAGLHGR
                     AFIPLLSSFACAIPGIMATRVIDNRRDRLTTILIAPLMTCSARIPVYTLIISAFIPDE
                     QIWGWFNLRGLVMFGLYAAGIASALGVSFLIKFLMWRDYAPAPFMLELPDYKLPRARS
                     IAIGVYTRAKMFLQRAGTTIFSMMVLIWFLASFPVAPAGAPDPAINYSFAAIIGKALE
                     PLLAPLGFNWQIAVALIPGMAAREVAVAALGTVYAIEGGKEAADQI"
BASE COUNT         1547 a         3434 c         3324 g         1743 t
ORIGIN      
        1 tcaacacttt acccattggt taagtatcaa tccaggggtg agttttcgat gaggaacacc
       61 taccgaggcg gctgccattg cggcgccgtg cgttttgaat gtgagatcga tccggccgag
      121 ggtacgagtc gctgcaattg ctcgatgtgc gccaagggcc ggttctggaa agccatcgcc
      181 cggaaggacg ccttccggct gctgcagggc gaggacgcgc tgtccgatta tcgcttcggc
      241 agccgtacca tccgccatgc cttctgccga cactgcggca tcaagccgtt cggccagggc
      301 gatatggagg ccctgggcgg catcttttat gcggtcaacg tcgcctgcct ggacggtgcg
      361 gcgccggagg agatggcagc cgggccgatc gtgtgccagg acggcaaaaa caacgcctgg
      421 gacaaggcgc cgtcggagac gcgccacctt tgaggcgcgc tcagagcccg accttgcgga
      481 acacctcgac gaaacgctcg acgtcttcct cgtcgttgta gacgtgcggg ctgattcgca
      541 gccgaccgag ccgcggtgcg gcatagacat tttctgccgc gagtttttta ggcaaatcct
      601 gcgccatgcc ctgcggaaat tgcaggctga gcacgtgcgg cgcgcgcagc ttcttgtcga
      661 tcacgcgcac gcctgagttg gcgagcccgt cggccagccg gtcggtgagc attgagagcc
      721 gggcgacgat cgccgcgttg ccccagcccg ccatcatctc catgccgacc gccgccattt
      781 ccatcgagat gaaatggtcg cgctcgccca tgtcgtagcg tcgcgcgccc tcggcatagg
      841 cgatgtcgcg gaaatagatc gtgtcctcgg ccgataccgc cttgcgcgcc gccgcggtct
      901 gctcgagcgg cacgcggtcc tggcggcgcc tggcgacgta catgaaggcg cggccgtagg
      961 gcccgagcac ccacttgtag gtcggaaaga tcaggaagtc gggatcgagc gccttcacgt
     1021 cgatgcggcg cacgccgaca tcgtgcgtgg cgtcgaccag caatgcggcg cccttgtctt
     1081 ttgccgcctg ggagatgcgt gccatgtcga gcgccccgcc gtccgaccag tgcaccgagg
     1141 agatcgagac cagggcgagt ggcgccgcct ccgcgcgctc gatcgcttcc cctaccgccg
     1201 acgtccagtc gccgtcgccc ggctgcttca ccgtctccac cgcaaagccg ccggcctggg
     1261 cgcggctcat ccattccagc accggcgagg tgtggtcatc ctgcagcacc agcacccggc
     1321 tgccgcgcgg gatcgccatg actttgcccg cggtcgcgac gccgtagccc accgagggga
     1381 tgagggcgac atcgacagga tcggcgccga tcagcgccgc cgccgccttg cgcgcgcgct
     1441 cgtattgctg cgactggaag ttgctttcga gcttccatgg ctggcctttg cgcgcgacgg
     1501 cggcacgacc ggcctcctgc accgccaacg gcagcggact ccacgaggcg gcattcagga
     1561 agcagacgtc gcgcgggata tcgaacagcg cgcgttggca gggaagcata tgaccatctc
     1621 cgtcgggttc ggaatcagag tagcctatcc gtcatcccga gcgtagcgaa gcgaagcccg
     1681 gggatcttgt cggcggcaga caaggtctct ccgctacgcc tcccttcgac ttcgctcggg
     1741 gcaggcgctg cgttcggctt cggtcgagat gacgggtcgc tccattacct gcgatgtaat
     1801 tgagagcgcg gcgccgccgg cccatcttgg cctcatcgac ccaaggaggg atcagatgag
     1861 ctaccaatcc cgccagcgca tcgccgagca ggccgtcgca ttcgtaacgc cggtgccgcc
     1921 gcggctctcg ctcgccgatc gcctggccgc gactctcacg ctctggcgcg aacgcagcac
     1981 ggctcggcgt tacctcgccg cgatggatgc acgcagcctg cgcgacgccg ggatctcgcc
     2041 ggcggcggca gcctacgaat cgggcaaatc tttctggcag ccgttcggac cgctgcgcta
     2101 gcagccgttc cacccatcgc cgcgtcgtgc taggaacttg cgtcggccgc gagcgttaat
     2161 ccccgcgcgc aaggcgcggc cggtcgcccg ggacggcttc gcacgcggcg tgcagtggtc
     2221 gagaaaccct tcgcgcccgg gagcattgat ggttggcgca gagggggaag atggtaccgc
     2281 cggatctcga ccggacgaac gcgttgtttc tcgatctcga cggcaccctg cttgagatcg
     2341 cgccgacgcc ggagctggtt gtggtgccgc ccggcctgcc ggatctgctg accaacgttc
     2401 acggccaact gggtggcgcg gtcgccatcg tgaccggccg gccgatcggc gtcatcgaca
     2461 gactgcttgc acctttccat gccagtgccg ccggcgagca tggcgtggcg ttgcgctatc
     2521 aggacggcac ggtcgaggag atgcccaagg gtctcgccgt tcccgacaca tggcgcgacg
     2581 ccctgaaggc cgccgccgag cgctggcctg gcgtgctggt cgagcccaag ccgcatggcg
     2641 tggcggtgca ctaccgcctg gtgcccgaac gcggcaacga tgtgtggcgc ctggtgcgcg
     2701 ccttggtgcc ccaggatcat ccctggttcc gcctgatccc ggcgcgcgag gccgtcgaga
     2761 tcgggccgcg cgcggcctcc aagggccatg cggtcgaacg gctgatggcg caggcgccgt
     2821 tccgggggcg ccgcccgatc ttcgtcggcg acgacttcac cgacgaagcc ggcatggaag
     2881 ccgcccggca gttcggcggc gagggcctgc gggtggccga agtgttcggc ggcgagccgg
     2941 ccgcggtgcg cgcctggctg cgccgcggcg cggagttgtt gggcggccgt gccgtgccgc
     3001 cgtcgccggt cggtgtctcg ccatgaggga cgtcgcatga gcagcctcga tcttggcgtg
     3061 gtcggcaact gctcgatcgc cagcctgatc gaccgcaacg gccggcacgt ctggcatggg
     3121 ctgcagcggc tggacggcga tccggtgttc aacgccctgc tgggcggcaa ggagccgcaa
     3181 agcgggttca tggacgtcgt cgtggccggc accaaggaga gccaccagcg ctacctgcac
     3241 aacaccgcca tcctcgagac cacgatcgac ggcgccgccg gctcggtgcg gctggtcgat
     3301 ttcgcgccgc gctttcgccg cttcggccgt atgttccgtc cgcccatgct ggtgcgcctg
     3361 atggagccgg tggccggccg gccgcgcgtg acggtgcggc tgaggcccac cttcgactac
     3421 ggcgcgcgca aggcgcagct cacctcgggc agcaaccatg cccgcttctt cagcgacacg
     3481 gcggtgctcc gactcaccac cgacgcctcg atcaacaacg tcctgcatga ggccgagttc
     3541 tcgctcgacc ggccgatcac cctgatcgtc ggcgccgacg agagcgtgcc cgagaatccc
     3601 gatgcgctgg cgcgcagctt cctggccgag accgagtcgt actggcacac ctgggtgcgc
     3661 gatctcaacg tcccgttcga cttccagcag gcggtgatcc gcgcagggat cacgctgaag
     3721 ctttgcagct acgaggacac cggcgcagtg ctggcggcgc tcaccacctc gatccccgag
     3781 gcgcccgaca catcgcgtac ctgggactac cgcttcacct ggctgcgcga cgccttcttc
     3841 accgtgaacg cgctcaaccg gctgtcggcg acgcgcacca tggaacgcta cgtgcgcttc
     3901 atcgtcgaca tcgtcgaggc cggcagctcg aagggcgagg tcgccgccat cgcgccgctg
     3961 tttcccatcg cgcccggcac cgacacgacc gaacggctga tcgattcgct gcccggctac
     4021 cgcggctacg gcccggtgcg catcggcaac gcggcggtgg tacagcgcca gaacgacacc
     4081 tacggctcga tggtgctgac ggcggcgcag atgttctggg acgagcgcct gccgcgccaa
     4141 ggcgacctcg agctctaccg tcagctctgc gtcgtcggca acgaggccca gcgcgcggcg
     4201 ttgacgcccg acgccggact ttgggagtac cgggagcgcg aggaagtgca cactttctcg
     4261 gcgacgatgt gttgggcggc gcagtaccgg ctcggcctga tcgccaagcg ggtgggaatg
     4321 gatgccgaat cgcgcgaatg gctcgcccgc gccggggtgc tgcgccagga agtgctgcaa
     4381 cgcggcacga cgcaggaagg ctggctgtcg ggcgtgctcg accgcgacat gctcgacgcc
     4441 tcgtcgctgg tgctgcccga gatcgggctg ctgagctccg acgatccgcg cttccacgcc
     4501 accatcgacg ttgccggcaa gcgcctgatg aagaacggct tcctgatgcg ctatcgcgaa
     4561 tcggacgatt tcggcaagcc gtccaacgct ttcctgctct gcaccttctg gtacatcgac
     4621 gcgctggcca gcgtcggccg ccgcccggag gcgctcgaac tgttcaacaa tctgctcgcc
     4681 cggcgcaacc acgtcggcct attgtcggaa gacatcgatc cgcgcagcgg cgagctgtgg
     4741 ggcaatttcc cgcagaccta ctcgcaggtc gggttgatcc tgtcggccat gcgcctgtcg
     4801 cgcagttggg aggaaggact atggcacgcc tcataatcgt ctcgaatcgg gtgccgattc
     4861 ccaaagcccg cagcaccgca gcgggcggcc ttgcggtggc gctgcacgac ctcttgatac
     4921 cgggcgcgat gtggttcggc tggagcggaa ggctcaccgc cgaaccctcc ctgttgccgg
     4981 cgctggtcga ggcgcgcggc gtcacctatg ccacggtcga cctcaccgcc gaagctcacc
     5041 gcgccttcta tgtcggcttc gccaacggcg cgctgtggcc gctgctgcat ttccgcctcg
     5101 gcctgatgca tttccgccgc gaggactatc tcggctatct ggcggtcaac gaaacctttg
     5161 ccctggcgct cagccaagtg gtgcagcccg acgacacggt gtgggcgcac gactatcacc
     5221 tgctgccgtt cggccgcatg ctgcgccggc acggtttcgc cgggccgctc ggcttcttcc
     5281 tgcatgtgcc gttcgtgccg ccgtcgatgc tcgaggcgat gccggtggcc cgcgagctgg
     5341 tggccgatct ctgcgcctac gacctgttgg gcttccagac cgaggagcac gcgcgcgact
     5401 tccgcgactg cgcccaccgc atgctgggcg ccaccgtcga cggcgaatgg gtgaagctga
     5461 atggacggcg cacgcgcgtc ttcgccaacc cgatcggcat caacgcccag gccttcgccg
     5521 aggaagccga gcgcgccgcc aacgaccgac tggtgcagcg ggtggccggc agcctggtcg
     5581 gccgcatgct cgccatcggc gtcgaccgca tggattattc caagggcctg cccaaccgtt
     5641 tcgaggccta tggccggctg ctcgagcgcc atcccgagca ccgccgcagg atccacttcc
     5701 tgcagatctg cccgcgctcg cgcgaggagg tcgacgaata ccgcaaactg cgcgccgagc
     5761 tcgaccggct gaccggccgc atcaacggcc gcttttccga gttcgactgg acgccgctgc
     5821 gctactcgac gcggccggcg ccgcgcccga cgctggccgg cctgttccgc atcggccgca
     5881 tcggcgtggt gacgccgttg cgcgacggca tgaacctggt ggccaaggaa ttcgtcgccg
     5941 cccagcccga cgaggatccg ggcgtgctgg tgctgtcgca attcgcgggc gccgcgcatg
     6001 agctgaccga ggccctgatc gtgaacccgt tcgaccccga cgccatcgcc gaagccatgc
     6061 atgtcggcct caccatgccg ctcggcgagc gccgcgaacg gcagacggcg ctcaaggcca
     6121 aggtcttccg caccaccgcc gacctgttct gccggcgctt catcgacgca ctcaccgcgc
     6181 cgacgctgac cagggttgct gcttaaacgg tatctttcat gttcttccgg accgcgcgca
     6241 tcctgcgcgc ctcaggcgca tgtgaatgcg ccgacatgag cgagccagag gctcgcgcgc
     6301 ccagcgatca ccacatcgtc ttcgccgccc gtcccggcca ttcgcggtcg taggcttcgc
     6361 cgccgacgcg gtcgtggctg agcgccgcca ggatctggcc ggcgctgggc aggctcttgg
     6421 ggtcgacgtg agatcagctt gagttcgtcc ggcgaccaat ccgctgctga tttcgaatcg
     6481 ccggtcacgc gtcgtggtcc taccagaaac gcctgatgcc atacgcgtcg aacgcccgct
     6541 catttgaggc cagcgtcagg tcctcgatta tcgcctgggc aatcagcatt cgatcgaaag
     6601 gatctcggtg caagcctgga agagcgccgg cggcttggcc gtggtgcacg gagacagcca
     6661 gcgcaatgaa ttgctgactt tcgatggccg acatcacgtc gatggcgacc agctcagcct
     6721 caggtagttt tcccaaacga tgttttgtcg cgatctccca cgccgaggcc gcgcttacga
     6781 acacttcgga accggatgaa tcgatctccg tgcggacgcg tttgggcagt gaggaatgtc
     6841 ctgctagcca ccatagaaac gcgtgcgtat cgagaagaag ccgcacgggc tactcccaaa
     6901 gcttcagctc ttcctccggc aggggctcga agaattcagg gccgatcttt atcttgccct
     6961 tcagagcacc gaatttgcgc tttggctttg cctttggggt caccggcacg atcctggcaa
     7021 cggggtcctt gccgcgcgcg agcacgatct cctcgccggc ttcggcgcgg gcgacgagct
     7081 tggacaaatt ggtcttggca gcatggatcg tataggtggg catgctcggt aacctagcta
     7141 actcccttag ctaattcaag cccatcgcac cggcgaggta ccgagcggct cggcaggctt
     7201 ggcgaagtag ggcggcgtct gggcgatgcg ccagggtgtt acgaacaccg gatcgtcgcc
     7261 gcccgcgatc gtgagcgaat cgtcggcccg cctcggccgg ccgagcgggc cgaggaccga
     7321 ataagcgagg tccatgctca cggaccggcc atgatgttgg ccaacaacgc catcagcacg
     7381 tcagggcatg tgatgtgcgg gttatgactg gcatcgatct cgtaatattt ccaggccgcc
     7441 tcgctcctgg cgcgctcgcc gaactggcgg aacacgtcgc ccggcccgtt gcgcttggcg
     7501 tagatgtagt ggcgcggcgg cggtggctgc ttggactcca ggcggagctt ctgctcgaaa
     7561 gtcttgatcg gctgcggatg gcgccgcggg ctcgcccagg caaggtcctc cggcgcggtg
     7621 tcggttggca tgggattgat cggcagcttc cagccctcgc cgtccttcag ggcgccggcc
     7681 cgcatgttgg cctcggcctt gggtcccacg aggtcgaaca ggctctgccc gtcctggggc
     7741 gcaaaggcgt cgatatagac cacgcgggcg aggcggcccg gcaccctgtc ggccaccccg
     7801 gtcgccacca tgccgccata ggagtggccg agcagggtga cgtccgtcaa atcctcgaat
     7861 tcgagcaccg cggttacgtc ctggacgtgg gtcgacaggt ctatgtcggg gtgcgccaga
     7921 tgggcgcgct cgcccagtcc ggtgtaagta ggcgaaaaaa actcatgtcc ggcggcccca
     7981 aacagcggcc gcatcttctt ccaagcccag gcggccgacc acgcgccatg cgccaatacg
     8041 attgttgcca tgcgccccta cctccctgct ggcaaagacc gtttgctagt gctactacga
     8101 attactcgca atgacgtcac gaccaaccat agcactgggc aacgcacggg tgggctttcg
     8161 cggccgcatc catgcgcttt gcgtcaaagg ggccagtgcc ggcctgccgg agcccgagct
     8221 ggagcgccgg ctgatcgagc tgggcttcgt cgagggcgct tcggtcgaat tgctgcatca
     8281 gggcctgttc ggcagcgatc ccatcgccgt gcgcgtggcc cacgccacca ttgcgctgcg
     8341 ccgccgcgag gccatggcga tcctggtgaa cgcggaggcg cccgcgtgaa cgtcgcctcc
     8401 aacctggcgc ccatcgtggc gctggtcggc aaccccaatt gcggcaagac ggccctgttc
     8461 aacgccctga cgggcggccg ccagaaggtc gcgaactatc ccggcgtgac ggtcgagaag
     8521 aaggtcggcc gggtggtgac gccggccggt cgcgccgtcc gcatcgtcga cctgccgggc
     8581 acctattcgc tgcgcgcgcg ctcgcccgac gaggagatca cgcgcgacgt ggtgctgggc
     8641 aagctcacgg gcgaaggcgc gccggacctg atcgtctgcg ttggcgatgc ctccaacctc
     8701 cggctggcgc tgcgcctcgc gctcgagctc aagaaggtcg gccggccggt ggtgctggcg
     8761 ctcaacatga tggacatcgc ccgcaagcgc ggcatcgaga tcgacaccga aaagctggcg
     8821 cgcgagcttg gcgtaccggt cgtgcagtcg gtcgcggtgc gccgcggcgg cacctcggcg
     8881 cttttgggcg agatcgaccg gctgctcaag agtctgccgg caatcggcgc cgccgactgg
     8941 cgggcacccg atgccggcga gctgcgcggc ggccagcacg aggccgaccg cgtcctgcgc
     9001 gcggcggtca agagttcggg cgagcgcgac cgcggtacgg tggcggccga tgccgtgctg
     9061 ctgcatcccg tcgccgggct cgtcatcctg ctcgccatcc tgttcgtcat gttccaggca
     9121 gtgttcgcct gggcgcggcc actgatggac gtgatccagc agggcttcgc ctggctcggc
     9181 gccggggtcg ggatctcgcc gctgcccgac ctgctgaaaa gcttcctcaa ggacgggctg
     9241 atttccggcg tcggcagcgt ggtcgtcttc ctgccgcaga tcgtgatcct gttcttcttc
     9301 atcctgctct tggaagacct gggctacatg gcgcgcgccg ctttcctgat ggatcgcatc
     9361 atgggcggcg ccggcctgca tggccgtgcg ttcattccgc tgctctccag tttcgcctgc
     9421 gccatccccg gcatcatggc gacgcgggtg atcgacaacc gccgcgaccg gctgaccacc
     9481 atcctgatcg cgccgctgat gacctgctcg gcgcggattc cggtctacac cctgatcatt
     9541 tccgccttca tccccgacga gcagatttgg ggatggttca atctgcgggg cctggtgatg
     9601 ttcggcctct acgctgcggg catcgccagc gccctgggtg tgtcattcct gatcaagttc
     9661 ttgatgtggc gggactacgc gccggcgccg ttcatgctcg aattgcccga ctacaaactg
     9721 ccgcgcgccc gcagcatagc gattggcgtc tatacgcggg ccaagatgtt tctgcagcgc
     9781 gccggcacca cgatcttctc gatgatggtg ctgatctggt ttctggcgtc gtttccggtg
     9841 gccccggccg gcgcgccaga cccggccatc aactacagct tcgccgccat catcggcaag
     9901 gcgctggagc cattgctggc cccgctcggc ttcaactggc agatcgcggt ggcgctgatc
     9961 cccggcatgg ccgcgcgtga agtcgcggtc gctgcgctcg gcaccgtcta cgcaatcgag
    10021 ggcggcaagg aagccgccga ccagatcg
//
LOCUS       DASWGA010000328         1597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1424610, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000328 DASWGA010000000
VERSION     DASWGA010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1424610"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="VF991_07995"
     CDS             complement(<1..365)
                     /locus_tag="VF991_07995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556420.1"
                     /translation="MVEAKSILTALALSPLASFGALAQNGYSFTDAANSAVRYSAAPA
                     KPVLACAAVTGLATAETTVVSVRVVPAADGVPEHCRVTGLIQPEIRFELNLPANWNRR
                     FYMHGNGGFAGETPEFGARP"
     gene            complement(326..1498)
                     /locus_tag="VF991_08000"
     CDS             complement(326..1498)
                     /locus_tag="VF991_08000"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9556421.1"
                     /translation="MAGALDGLVVLDLTTHLSGPFCGMQLGDLGADVIKIESPQGDSM
                     RGAPPFIAGEGAPFMLWNRNKRGIRLDLKHADDLEIFWDLVDGADVVLENFRPGVMKR
                     LGLGWHELSARNPKLVLGSISGFGQTGPYASRGGFDLLIQAMSGLMSVTGPKDGPPYR
                     IPLAISDVGAGLYLTIGVLAALAARQKTGTGQWVETSLLEATVSLGVYEAANYFANGK
                     RPEKLGQAHRGSSPYQVFQTADGWLTIGGAQQNFFRKLCALIGKPELADDPRFTTNAQ
                     RVKNNDAIVGILQEAVAKRSTAQWMAALEAEGIPAGAVLHHDEVFADPQVLARSMVAE
                     VEHAKAGRQKTLGVPLKMSATPGGVRRAAPVLGQHDDEIKGAKQWSKRKASSQRSR"
BASE COUNT          251 a          539 c          545 g          262 t
ORIGIN      
        1 ggccgcgcgc cgaattcagg cgtctcgccc gcgaagccgc cgttgccatg catgtagaag
       61 cggcggttcc agttggccgg caggttgagc tcgaagcgga tctcgggctg gatcaggccc
      121 gtcacgcggc aatgttcggg cacgccgtcg gcggccggca ccacgcggac cgaaacgacg
      181 gtcgtctccg ccgtggcaag gccggtgacg gcggcgcagg ccagcactgg cttggccggc
      241 gccgcgctgt agcgcaccgc cgagttggcg gcgtcggtga agctgtagcc gttctgcgcc
      301 agcgccccga aagacgccaa aggactcaac gcgagcgctg tgaggatgct tttcgcttcg
      361 accattgttt cgctcccttg atctcatcgt cgtgctggcc gagcaccggc gccgcgcggc
      421 gcacgccgcc cggcgtcgcc gacatcttca agggcacgcc cagcgtcttc tgccgccccg
      481 ccttggcgtg ctcgacctcg gccaccatgg agcgcgccag gacctgcggg tcggcgaaga
      541 cctcgtcgtg atgcaatacc gctccggcgg gaatgccctc ggcctcgagc gccgccatcc
      601 actgggcggt gctgcgcttg gcgactgctt cctgcaggat accgacgatc gcgtcgttgt
      661 tcttgacgcg ctgggcattg gtcgtgaagc gcggatcgtc ggcgagctcg ggcttgccga
      721 tcagcgcgca gagcttccgg aagaagttct gctgcgcgcc gccgatggtg agccagccgt
      781 cggcggtctg gaacacctgg tagggcgagg agccgcgatg ggcctggccg agcttctccg
      841 gccgcttgcc gttggcgaaa tagttggcgg cttcgtagac gccgagcgac actgtggctt
      901 ccaggagcga ggtctcgacc cactggcccg tgccggtctt ctgccgcgca gccagggccg
      961 ccaacacgcc gatggtgaga tagaggccgg cgccgacatc ggagatggcg agcggaatgc
     1021 ggtagggcgg gccgtccttc ggcccggtca ccgacatcaa accggacatc gcctggatca
     1081 ggagatcgaa accgccgcgg ctggcatagg ggccggtctg gccgaagccc gagatcgagc
     1141 ccagcaccag cttcggattg cgcgcgctga gttcatgcca gcccagcccc aggcgcttca
     1201 tcacgccagg ccggaaattc tccagcacca cgtcggcgcc gtcgaccagg tcccagaaga
     1261 tttccagatc gtcggcgtgc ttgaggtcga gccggatgcc gcgcttgttg cggttccaca
     1321 gcatgaaggg cgcgccctcg cccgcgatga agggcggcgc gccgcgcatg gaatcgccct
     1381 gcgggctttc gatcttgatc acatcggcgc cgagatcgcc gagctgcatg ccgcagaacg
     1441 ggcccgagag gtgcgtcgtc agatcgagga ccacaaggcc gtcgagggcg ccagccattc
     1501 tattctccca gcagcttcct gaggtcggcc atggtggtcg cccatcgacc ggtaccgaac
     1561 tcgttcgaca cgaccttgcc gtcgctcacg atcagga
//
LOCUS       DASWGA010000329         3274 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2180877, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000329 DASWGA010000000
VERSION     DASWGA010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2180877"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VF991_08005"
     CDS             complement(<1..263)
                     /locus_tag="VF991_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HEX9556422.1"
                     /translation="MGDRAQTFGRTYEAASPTRVRDYIDLLKPRVMSLVVFTGLVGVL
                     IAPGHLHPFAAALAVLAIALGSGAAGAINMWYERDLDALMARTA"
     gene            complement(308..1234)
                     /locus_tag="VF991_08010"
                     /pseudo
     CDS             complement(308..1234)
                     /locus_tag="VF991_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949784.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
     gene            complement(1379..2245)
                     /locus_tag="VF991_08015"
     CDS             complement(1379..2245)
                     /locus_tag="VF991_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013169007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HEX9556423.1"
                     /translation="MAMQIRNPIEWAWDHLKQTGHAMETTAHAVEGAWEGRDAVTPMV
                     RRIHAADIGDALARGVKDFGACRTDVIFLCLIYPVAGLVISRMAAGYGMVALIFPLIS
                     GFALVGPLFGLGLYEMSRRREQGIATGWADAFAVMRAPAIGAIVVLAALLFGLFCLWL
                     FAAYLIYTVTLGPDQPVSATAFVRDALTTPAGWTMIVVGCGVGFLFALVALVISVVSF
                     PLLLDRNVGLGTAIATSVRAVLTNPGPMAMWGLIIAGSLVIGAIPLLVGLAIVLPVLG
                     HATWHLYRKVVS"
     gene            2201..2626
                     /locus_tag="VF991_08020"
     CDS             2201..2626
                     /locus_tag="VF991_08020"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9556424.1"
                     /translation="MIPSPFDGIADLHGHVCLLSDRKSEGRGDNDHERAAIHHAKILR
                     LFGRHVERLEQAFREGASVAVVDVDEAGVHAVVKEITANGGKAKGIVADLREDANARR
                     IVRETANAFGGLDFVWNHLGHPGPALVRGHRDGRLRAGG"
     gene            complement(2854..>3274)
                     /locus_tag="VF991_08025"
     CDS             complement(2854..>3274)
                     /locus_tag="VF991_08025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556425.1"
                     /translation="HNLSQYAYTIAGPLQLRSDGRHFDHVPRTHRGAAGEAKARRQLS
                     FGANVRQDTFGLTVGLFRRQSQRRSLEPFCPFLNRLGLPSVDGCDSTTVLGGRPAAMA
                     RAYSLDLRERVVAAVADGQPCRAVVSSFRVSVASVVK"
BASE COUNT          631 a         1062 c         1110 g          471 t
ORIGIN      
        1 gccgtgcgcg ccatcagggc atcgaggtcg cgctcgtacc acatgttgat ggcgccggcc
       61 gcgcccgatc ccagcgcgat cgccagcacg gcgagcgcgg cggcaaacgg atgcaggtgt
      121 cccggcgcga tcagcacgcc caccaggccc gtgaacacaa ccagcgacat cacgcgcggc
      181 ttcaggaggt cgatgtagtc gcgcacgcga gtcggcgatg ccgcctcgta tgtcctgccg
      241 aaagtctgtg ccctgtcgcc catcgtctct cacggcgaag gcgccgtatg gcgcctccgc
      301 tcctcgatca gtggtgagtt gccggcgcga tgtggggcaa ctcttcgaag gtgtgaaacg
      361 gcgggggtga cggcaccgtc cattcccgcg tcgtggcgcc ctcgccccag tagttggcgc
      421 caactctctt gccggccagc agcgtgccga agaccacgaa gatcagccag aagatggtcg
      481 aggcgaagga gatgaacgcg ccgaccgacg agatgtagtt ccagtgcgac atcgcgtcgg
      541 gatagtcgac gtaatggcgc ggcatgccgg ccagcccgct gaagtgcatg gggaagaagg
      601 tcaggttgac gccgatgaag gtcgtccaga agtggatctg gccggcccat tccggatact
      661 ggcggccggt catcttgccg atccagtagt agaagccggc gaacatgccg aacaccgcgc
      721 cgagcgacag gacatagtgg aagtgcgcga tcacgtagta ggtgttgtgc agggcatagt
      781 cgacgccggc attggccagc accacgccgg tcacgccgcc cacggtgaac aggaagacga
      841 agccgatcgc ccacagcatc ggcacttcga gacggatcga gccgccccac atggtggcga
      901 tccaggagaa gatcttcacg cccgtcggca ccgcgatcac catcgtggcg gcgacgaagt
      961 aggcgcgcgt gtcgacgtcc atgccgaccg tgaacatgtg atgcgcccac accacgaagc
     1021 ccacgacgcc gatcgccacc atcgcgtagg ccatgccgag atagccgaag atcggcttct
     1081 tggagaaggt cgagacgatg tggctgacga tgccgaaggc cggcaggatc atgatgtaca
     1141 cctcgggatg gccgaagaac cagaagaggt gcaggaacag ggtcggatcg ccgccgccgg
     1201 ccggatcgaa gaagtgcgtg ccgaagttgc ggtcgcccgc gccctgctgc accgagagcg
     1261 gcacgtagac cctccagccg gtaccgacgc cgccgccgat gacggccgag agcagcagca
     1321 ggacgaaggc cggcggcgga gtagtcgggt attaggggct tgcttatcag caccacctct
     1381 aactcaccac cttgcggtag aggtgccagg tcgcgtgccc gagcacgggc agcacgatgg
     1441 cgaggccgac cagcaggggg atggcgccga tcaccaggga gcccgcgatg atcaggcccc
     1501 acatcgccat cggtccggga ttggtgagca cggcgcgcac cgaggtggcg atggcggtgc
     1561 cgaggccgac gttgcggtcg agcagcagcg ggaaggagac gacgctgatc accagcgcca
     1621 cgagggcgaa caggaagccg acaccgcagc cgaccacgat catcgtccag cccgccggcg
     1681 tcgtcagcgc atcgcggacg aaggcggtgg ccgagaccgg ctgatcgggc cccagggtca
     1741 cggtgtagat gaggtaggct gcgaacagcc acaggcagaa cagcccgaac agtagcgcag
     1801 ccagcaccac gatcgccccg atcgctggtg cgcgcatcac ggcgaaagcg tccgcccaac
     1861 cggtggcgat gccctgctcg cgccgccggc tcatctcgta gaggccgaga ccgaacagcg
     1921 ggccgacgag ggcgaaacca gagatcagcg ggaagatcag cgccaccatg ccgtagccgg
     1981 cggccatgcg cgatatgacg aggccggcga cgggatagat gaggcagagg aagatgacgt
     2041 ccgtgcggca ggccccgaaa tccttgacgc ccctggcaag cgcatcgccg atgtcggcgg
     2101 catggatacg gcggaccatc ggcgtgaccg cgtcccggcc ttcccaggcg ccttcgaccg
     2161 cgtgggccgt cgtctccatc gcgtggccgg tctgcttgag gtgatcccaa gcccattcga
     2221 tgggattgcg gatctgcatg gccatgtctg cctcctctcg gacaggaagt ccgaaggtcg
     2281 cggcgacaat gatcacgaac gtgccgcgat ccaccacgcg aaaattctac gcctgtttgg
     2341 ccgccatgta gagaggcttg agcaggcttt ccgcgagggc gcgagcgtcg ccgtggtcga
     2401 cgtcgacgag gccggcgtgc atgcggtcgt gaaggagatc acggccaacg gcggcaaggc
     2461 caagggcatc gtcgccgacc tcagggaaga tgccaacgcg cgacggatcg tgcgcgaaac
     2521 cgcgaatgcc ttcggcggcc tggacttcgt ctggaaccac ctcggccatc cgggaccggc
     2581 cttggttcga gggcatcgag atggccgact tcgcgctggc ggttgacctc aacctgcgct
     2641 cgcagatcgt caccaccgag gcggccctgc ccgagttcag ggcgcgcggc ggcggcagcc
     2701 tgctctatac cgcctcgacc ttgggcctgg tcggctcgca ggcgtctgcg acagctggcc
     2761 cagcagccag tcacgctccc cttccagcgg gtatggccgc ttgccctgac aggtcaggcc
     2821 gccgggctgc caggtggcgc gcgcccgctg cgatcactta accacgctcg ccacgctcac
     2881 ccgaaacgac gacaccaccg ctcggcaggg ctgaccgtcg gcgaccgcgg ccacgacgcg
     2941 ctcccgaaga tccaatgagt aagctcgcgc catcgctgct ggcctcccgc ccagcacggt
     3001 ggtcgagtca catccgtcca cgctgggcaa tcccagccga ttcagaaaag gacagaaagg
     3061 ctctaggctt cggcgctggc tttgccgacg gaaaaggcct accgtcaaac cgaaggtgtc
     3121 ctgccggacg tttgcgccga acgacaattg ccttcgtgct ttggcctcac cagctgcgcc
     3181 gcggtgggtg cgggggacat gatcgaagtg acgcccatcg ctcctgagtt ggagggggcc
     3241 ggcgatggta taggcgtatt gcgaaaggtt gtgc
//
LOCUS       DASWGA010000330         3576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2447979, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000330 DASWGA010000000
VERSION     DASWGA010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3576
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2447979"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="VF991_08030"
     CDS             complement(<1..520)
                     /locus_tag="VF991_08030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9556426.1"
                     /translation="MFQPDLLKGKRILVTGGGSGLGRSMAHRYLELGANVVICGRRQD
                     VLKQTAEELAQETKGDIETIGCDVRVPDAVEAMMDTIWAKRPLDILVNNAAGQILAQT
                     HKMSTRAIDAVLGIVLHGSAYCTVAAGRRWIDSGLRDRVVMSILTVSSLTGAPFTVPS
                     AMAKAGVLAMTKS"
     gene            complement(531..1721)
                     /locus_tag="VF991_08035"
     CDS             complement(531..1721)
                     /locus_tag="VF991_08035"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9556427.1"
                     /translation="MPGALDGLKVIDLSRVLGGPYCGQMLADHGAEVIKVEPPQGDET
                     RGWGPPFDKEGISAYFAGINRNKRKIALDLAKPQGREILLKLLEQADVLIDNFKTGTM
                     EKWGVGYDTLSKKFPRLIHARVSGFGADGPLGGFPGYDAMVQASSGLVSVNGSPESGP
                     VRIGVPVVDLSTGMNACIGILMALYERARSGKGQFVDATLYDSAIALHQPHAPNYFVA
                     GATPKLVGNSHGSLAPYSNFPTKGRNIVVGAGNDSQFRKLTQMLGKPELADDPRFKTN
                     KDRVANRPALEAELRALTKDRDGESFANTLMENGVPSGAVMEVPDVMEHPHTKHRGMV
                     WEKDGYRNVGNPVKLSRTPASPRSKPRTFGADTKAVLAEHGYSAAEIDMLVTTGVALT
                     KIKK"
     gene            1874..3049
                     /locus_tag="VF991_08040"
     CDS             1874..3049
                     /locus_tag="VF991_08040"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX9556428.1"
                     /translation="MLSGIHGHQDIERVVYGKPAGPALLAEAERLGAKRVFVTTSKSV
                     AQSALLADVVRDLGDRYAGVYSGITAHSPRPCVIEGAKLAREAEADLIVAVGGGSVID
                     AAKVMLIALWQNATTIEDLDLYRAGRPKEGAAPPSEAIKPPSDPVRMIAVPTTLSAAE
                     FNAFAGVSDPRHGIKESFGHRLIVPRVIVLDPAATLATPMDLMLSTGVKAVDHAVERL
                     CSQQAHPFVLGTATEALKLLARALPAHKARPEDMATRLDLQFGMWLSIGAGTSGVGVG
                     ASHGIGHVLGAACHVPHGHTSCVMLPSVLRWNLPANAERQKRVSEAFGKPDQPAADLV
                     AGLVKTLGLPGRLAAVGVGKERFREIAEKSMHDRAVLNNPRPIKGPAEVMEILELAA"
     gene            3147..>3576
                     /locus_tag="VF991_08045"
     CDS             3147..>3576
                     /locus_tag="VF991_08045"
                     /inference="COORDINATES: protein motif:HMM:NF041278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CmcJ/NvfI family oxidoreductase"
                     /protein_id="HEX9556429.1"
                     /translation="MPSVHLAEPTVRAPIQAWVEAPVNYLADLSIKPVTYNPLPGTGV
                     PRRLGNYRDFKVRIHDTRPMVGELSLDRQAFILTHHDTAVRDFYDEQEVRTRYHAEVE
                     ALIKRETGAAKVVVFDHTVRTADRAVERGLRTPVRSVHNDY"
BASE COUNT          566 a         1196 c         1206 g          608 t
ORIGIN      
        1 ggctcttggt catcgccagc acgcccgcct tggccatggc cgacggcacc gtgaaggggg
       61 cgccggtcag cgaggagacg gtgaggatcg acatcacgac ccggtcgcgc agccctgaat
      121 cgatccagcg ccggccggcg gcgacggtgc agtaggccga gccatgcagc acgatgccca
      181 gcacggcatc gatggcgcgc gtcgacatct tgtgggtctg cgccaggatc tggccggcgg
      241 cgttgttgac caggatgtcg agtggccgct tggcccagat cgtgtccatc atggcctcga
      301 cggcgtcggg cacgcgcacg tcgcagccga tcgtctcgat gtctcccttg gtctcctggg
      361 caagctcctc ggcggtctgc ttcaggacat cctggcgccg cccgcagatc accacgttgg
      421 cgccaagctc gagatagcga tgcgccatcg agcggccgag cccgctgccg ccgccggtca
      481 ccaggatgcg cttgcccttg agcaggtcgg gttgaaacat ctctcgcttc ctatttcttg
      541 atcttggtca gggcaacgcc ggtggtgacg agcatgtcga tctcggccgc cgagtagccg
      601 tgctcggcca gcaccgcttt ggtgtcggcg ccgaatgtcc tgggtttgct gcgcgggctc
      661 gccggcgtgc gcgagagctt gaccggattg ccgacatttc gataaccgtc cttctcccac
      721 accatgccgc gatgtttggt gtgcggatgc tccatcacgt cgggcacctc catcaccgcg
      781 cccgagggca cgccgttctc catcagcgtg ttggcgaagc tctcgccgtc gcgatccttg
      841 gtcagcgcgc gcagctcggc ttccagcgcc ggccggttgg cgaccctgtc cttgttggtc
      901 ttgaagcgcg ggtcgtcggc cagttcgggc ttgcccagca tctgcgtgag cttgcggaac
      961 tggctgtcgt tgccggcgcc gaccacgatg ttgcggccct tggtcgggaa attggagtag
     1021 ggcgccaggc tgccgtggct gttgcccacc agcttgggcg tggcgccggc cacgaaatag
     1081 ttcggtgcat gcggctggtg gagcgcgatg gcgctgtcat agagcgtggc gtcgacgaac
     1141 tggcccttgc ccgaccgggc gcgctcgtag agcgccatca ggatgccgat gcaggcattc
     1201 atgccggtcg acagatcgac caccgggacg ccgatgcgca ccggtccgct ttccggcgag
     1261 ccgttgacgg aaaccaggcc cgacgacgcc tgcaccatgg cgtcgtatcc cgggaagccg
     1321 ccgagcggac cgtcggcgcc gaaacccgag acacgggcat ggatcaggcg cgggaacttc
     1381 ttcgacagcg tgtcgtaacc gacaccccac ttctccatcg tgccggtctt gaagttgtcg
     1441 atcagcacat cggcctgctc gagcagcttc aggaggatct cgcggccttg cggcttggcg
     1501 agatcgagcg cgatcttgcg cttgttgcga ttgatgccgg caaagtaggc ggagatgcct
     1561 tccttgtcga acggcggccc ccagccgcgc gtctcgtcgc cctgcggcgg ctcgaccttg
     1621 atcacctcgg cgccgtggtc ggccagcatc tggccgcaat aaggcccgcc cagcacgcgc
     1681 gacagatcga tgactttcag gccgtccagt gcccccggca ttgcgtttct ctcctcggac
     1741 ttcatggcga acggcggtta tagaccacgg tccgcgcggc cggtaccgtc gggccatcat
     1801 cgaacgcgca ctcgatatcg ccacgcaaga tggcacgatg aacacctgga ccggatgaaa
     1861 gagggagata ggcatgctga gcggcatcca tggacaccag gacatcgagc gcgtcgtcta
     1921 cggcaagccg gccgggccgg cgctgctggc cgaggccgag cggctgggcg caaagcgcgt
     1981 gtttgtgacg acctcgaaat cggtcgcgca gagcgcgctg ctggccgatg tggtccgcga
     2041 tctcggcgat cgttacgccg gcgtctattc cggcatcacc gcccattcgc cgcggccctg
     2101 cgtgatcgaa ggggccaagc tcgcgcgcga ggccgaggcc gatctcatcg tcgcagtggg
     2161 cggcggctcg gtgatcgacg ccgccaaagt gatgctgatc gcgctctggc agaacgccac
     2221 gacgatcgag gacctcgacc tctaccgtgc cggccggccg aaggaaggtg cggcgccgcc
     2281 gtccgaggcc atcaagccgc cgtccgaccc agtccgcatg atcgccgtgc cgacgacctt
     2341 gtcggcggca gagttcaatg ccttcgccgg cgtcagcgat ccgcgtcacg gcatcaagga
     2401 aagcttcggc caccgcctga tcgtgccgcg ggtgatcgtg ctcgatccgg cggcgacctt
     2461 ggccacgccg atggacctca tgctgtcgac cggggtcaag gccgtcgatc acgcggtcga
     2521 gcggctgtgc tcgcagcagg cccatccctt cgtgctcggc accgcgaccg aagcgctgaa
     2581 actgctggcc cgcgcgctgc cggcgcacaa ggcccggccg gaggacatgg cgacgcggct
     2641 cgacctgcag ttcggcatgt ggctgtcgat cggcgccggc acgtcgggcg tgggcgtcgg
     2701 cgcaagccat ggcatcggcc atgtgctggg cgcggcctgc cacgtgccac acggccatac
     2761 gtcgtgcgtg atgctgccgt cggtcttgcg ctggaacctg cccgccaatg ccgagcgcca
     2821 gaagcgggtg agcgaggcgt tcggcaagcc cgaccagccg gcggctgacc tcgtggccgg
     2881 gctggtcaag acgctcggcc tgccgggccg gctcgcggcg gtcggcgtcg gcaaggagcg
     2941 ctttcgcgag attgccgaga agtcgatgca cgatcgcgcc gtgctcaaca atccgcggcc
     3001 gatcaagggc ccggccgagg tcatggagat tctcgagctg gcggcgtgat gaccccatga
     3061 aatcttctcg tgggccggcc gggctttaac gcgttaaagg gcacacgatc tctaggggcg
     3121 aaacgctgac ctcaatgggt gcgaccatgc cgtctgtgca tcttgccgaa ccaaccgtac
     3181 gcgctccgat ccaggcctgg gtcgaggcgc cggtgaacta tctcgccgac ctcagcatca
     3241 agccggtgac ctacaatccg ctgccgggca ccggcgtgcc gcgccggctc ggcaactacc
     3301 gcgatttcaa ggtgcgcatc cacgacacgc ggccgatggt gggtgagctc tcgctcgatc
     3361 gccaggcctt catcctgacg catcacgata ccgcggtgcg cgacttctac gacgagcaag
     3421 aagtgcgcac caggtaccac gccgaggtcg aagcgctgat caagcgcgag accggggcgg
     3481 ccaaggtcgt ggtgttcgac cataccgtgc gcaccgccga tcgcgcggtc gaacggggcc
     3541 tgcgcacgcc ggtgcggtcg gtgcacaacg actaca
//
LOCUS       DASWGA010000331         4315 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_793182, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000331 DASWGA010000000
VERSION     DASWGA010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4315
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_793182"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..897
                     /locus_tag="VF991_08050"
     CDS             <1..897
                     /locus_tag="VF991_08050"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014284311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HEX9556430.1"
                     /translation="TKPGVMMLAVFTAIVALTIAPGDLAPLRACIAVLAIAAGAGAAG
                     VLNMWYDADIDAVMTRTARRPLPSGRIGQGEALAFGLVLAAGSVVVLALAANLVAAGL
                     LAFTILFYVVVYTAWLKRRTPHNIVIGGAAGALPPVIGWAAATGDIGLEPLVLFLIVF
                     LWTPPHFWALALNRSDDYARAGVPMLPAVAGRTATKRQILLYSLLLVPASLLPCVLGF
                     AGAFYGAIAAISGALFIALALRLSRSRRGDAPVAQRLFVFSIAYLFLLFAAVLSDHGG
                     GRTQASLSSPGAHVGVATAGEG"
     gene            899..1777
                     /gene="cyoA"
                     /locus_tag="VF991_08055"
     CDS             899..1777
                     /gene="cyoA"
                     /locus_tag="VF991_08055"
                     /inference="COORDINATES: protein motif:HMM:TIGR01433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol oxidase subunit II"
                     /protein_id="HEX9556431.1"
                     /translation="MRHSLFVALLIGAAALSGCSEGVLDPKGPIAAAEREILFNALAI
                     MLAIVIPTILATLGVAYWFRSSNRRARYRPDFTYSGRLELLVWSIPAMTVLLVGGVAW
                     IGAHDLDPRKPIASGVEPIRVQVVSLDWKWLFIYPDQGIASVNHLTVPVGTPVSFELT
                     SSGVMNSFFVPQLGSQIYTMAGMVTRLHLQADHEGSYPGLSANYSGDGFADMRFTVDA
                     VLPEAFAQWIDGARSAGPMLDAGTYAALAKPSSAVAPFTYRSVAPDLFNGILGPAMHP
                     HGSAGLAHPTAKRAEK"
     gene            1774..3729
                     /gene="cyoB"
                     /locus_tag="VF991_08060"
     CDS             1774..3729
                     /gene="cyoB"
                     /locus_tag="VF991_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HEX9556432.1"
                     /translation="MNLLGKLSWDAIPLDQPIIMGATAFMGLVIVAVLSFITVKGYWA
                     PLWRDWITSVDHKRIGVMYILLALVMLLRGFSDAIMMRAQQAVAAGGAQGYLPPEHFD
                     QIFSAHGTIMIFFMAMPFVIGVMNFVVPLQLGVRDVAFPTLNSVSFWLTTSGALLINI
                     SLAVGEFAKTGWVAYPPLSELQFSPGVGVDYYLWSLQISGLGTLLSGINFVTTILKLR
                     APGMGYMRMPVFCWTALATSLLIVAAFPVLTATFAMLLLDRYLGFHFFTVDGGGNAMM
                     YVNLFWVWGHPEVYILVLPAFGIYSEVVATFSGKPLFGYRSMVAATMAICVLSFLVWL
                     HHFFTMGASADVNGFFGVMTMIIAVPTGVKVFNWLFTMYGGRVRFTVPMLWSIGFMIT
                     FVVGGMTGVLMAVPPADFQVHNSLFLVAHFHNTIIGGVVFGLMAGYNYWFPKVFGFRL
                     DERWGKASFWCWFVGFYLAFMPLYAVGLMGMTRRLQHYDNPAWQPWLMVAALGAVVIM
                     AGVACQAIQLVVSVRARRQLRDATGNPWTGRTLEWFTPSPPPAWNFTVLPLVGGFDRR
                     KHARGTQDYKAIEMPNNSPIGVITAFFAVVTGFALIWHIWWMAGLGLLGAFVTLLAFA
                     FRRQEEIEVPAVEIARFDRAHPAEVTP"
     gene            3726..>4315
                     /locus_tag="VF991_08065"
     CDS             3726..>4315
                     /locus_tag="VF991_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX9556433.1"
                     /translation="MNVAVALSDVRPEVAASEAGPAPKRVVVAYGFWIFLLSDIVMFA
                     TLFAGYAVLARATDGGPSGVQLFSQASVAIETACLLASSYTCGLMSLAVKSRRRLGTY
                     FGAFVTFALGLAFLALELREFADMIVRGAGPQRSAFLSAFFTLVGCHGLHVTAGLVWL
                     VVMMVQVVLRGFHPTVQRRLASFSLFWHALDIVWVWL"
BASE COUNT          566 a         1494 c         1353 g          902 t
ORIGIN      
        1 acgaagcccg gtgtgatgat gctcgccgtt ttcaccgcaa tcgttgcctt gaccattgca
       61 ccaggtgatc tcgccccgct tcgcgcgtgc attgcagtcc ttgccatcgc ggcgggagcc
      121 ggcgccgccg gcgtgctcaa catgtggtac gacgccgaca tcgacgccgt catgacacgc
      181 acggcgcgcc ggcctcttcc cagcggcagg attgggcagg gcgaagcgct cgcgttcggg
      241 cttgtccttg ccgctggcag cgtcgttgtg cttgcgctgg ccgcgaatct ggtggcggcc
      301 gggttgctcg ccttcacgat cctcttctac gtcgtggtct acacggcgtg gctgaagcgg
      361 cgcacgccgc acaacatcgt catcggcggg gccgccggtg cactgccgcc ggtgatcggc
      421 tgggccgcgg ccactggtga tatcggactc gagccgctgg ttctgttcct gatcgtcttc
      481 ctgtggacgc cgccccattt ctgggcgctg gcgctcaatc gcagcgacga ctatgcccgt
      541 gccggcgtgc ccatgctgcc ggccgtcgcc ggccgcacgg cgaccaagcg gcagatcctg
      601 ctttacagcc tactcctggt cccggcttcg ctgctgccct gcgtgctggg atttgccggt
      661 gcgttctatg gcgcgatcgc cgccatctcg ggcgcgctct tcattgccct cgcgttgcgg
      721 ctcagcagaa gccgcagggg cgatgcgccg gtggcccagc gcctgttcgt gttctccatc
      781 gcctatctct tcctgctgtt tgccgctgtc ctgtccgacc acggcggagg ccggacgcag
      841 gccagcctgt catcgccggg cgcccatgtc ggcgtcgcca cggcagggga gggctgacat
      901 gcggcatagt ctgttcgttg ctctcctgat cggcgcagcg gcgctcagcg gctgttcaga
      961 gggcgtcctc gatcccaagg ggccgatcgc agccgccgaa cgggagatcc tgttcaacgc
     1021 gctcgccatc atgctggcga tcgtcatccc cacgatcctc gccacgctcg gcgtcgccta
     1081 ctggttccgc tcgtccaacc ggcgtgcgcg ctaccggccc gacttcacct attccggccg
     1141 gctcgagttg ctggtctggt caatcccggc gatgacggtg ctgctggtcg gcggcgtcgc
     1201 ctggattggc gcgcacgacc tcgatccgcg caagccgatc gcctcgggcg tcgagcccat
     1261 ccgggtccag gtcgtctcgc tcgattggaa gtggctgttc atctaccccg accagggtat
     1321 cgccagcgtc aaccatttga ccgtcccggt cggcacgccg gtcagcttcg agctcacctc
     1381 gtcgggcgtc atgaacagct tcttcgtgcc gcagctcggc agccagatct acaccatggc
     1441 cggcatggtg acgcgcctgc acctgcaggc cgaccacgag ggcagctatc ccggcctgtc
     1501 cgccaactac agcggcgacg gttttgccga catgcgcttt actgtcgacg ctgtcctgcc
     1561 cgaggcgttc gctcagtgga tcgacggggc acgcagcgcc ggcccgatgc tcgacgccgg
     1621 cacctacgcc gcgctcgcca agccgagctc ggcagtcgct cctttcacct atcggtcagt
     1681 cgctcccgac ctgttcaacg gcatcctggg ccccgccatg catccgcatg gttctgcggg
     1741 gctcgcccat ccgacggcaa agagggcgga aaagtgaatc tcctgggcaa actcagctgg
     1801 gacgcgatcc cgttagatca accgatcatc atgggggcaa cggccttcat gggcctggtg
     1861 atcgtggccg tcctgtcgtt catcaccgtc aagggatatt gggcccctct gtggcgcgac
     1921 tggatcacct cggtggacca caagcgcatc ggcgtgatgt acatcctgct cgccctggtc
     1981 atgctgctgc gcggcttttc cgacgccatc atgatgcgcg cgcagcaggc ggtcgccgcc
     2041 ggcggggcgc aaggctacct gccgccggag cacttcgacc agatcttctc ggcccacggc
     2101 accatcatga tcttcttcat ggcgatgccg ttcgtgatcg gcgtgatgaa cttcgtcgtg
     2161 ccattgcagc tcggcgtgcg tgacgtcgct ttcccaaccc tgaattcggt gagcttctgg
     2221 ctgaccacct cgggcgcgct tctgatcaac atctcgctgg cggtcggcga gttcgccaag
     2281 accggctggg tcgcctatcc gccgctcagc gagctgcaat tctcgcccgg cgtcggcgtc
     2341 gactactatc tctggtcgct gcagatctcc ggcctcggca cgctgctgtc cggcatcaac
     2401 ttcgtcacca cgatcctgaa gttgcgcgcg ccgggcatgg gctacatgcg catgccggtg
     2461 ttctgctgga ccgccctggc gacgagcctg ctgatcgtcg cggccttccc ggtgctgacg
     2521 gcgaccttcg ccatgctgct gctcgaccgc tatctcggct tccacttctt cacggtcgac
     2581 ggcggcggca acgccatgat gtacgtcaac ctgttctggg tctggggcca tcccgaggtc
     2641 tatatcctcg tcctgccggc gttcggcatc tactccgagg tcgtcgcgac cttctcgggc
     2701 aagccgctgt tcggctaccg ctccatggtc gccgccacca tggcaatctg cgtgctgtcc
     2761 ttcctggtct ggctgcacca cttcttcacc atgggcgcca gcgccgacgt caacggcttc
     2821 ttcggcgtca tgaccatgat catcgccgtg ccgaccggcg tgaaggtctt caactggctg
     2881 ttcaccatgt atggcggccg cgttcgcttc acggtgccga tgctgtggtc gatcggcttc
     2941 atgatcacct tcgtcgtcgg cggcatgacg ggcgtgctga tggccgtgcc tcccgccgat
     3001 ttccaggtgc acaacagcct gttcctggtc gcgcacttcc acaacaccat catcggcggc
     3061 gtcgtgttcg gcctgatggc gggctacaat tactggttcc cgaaggtgtt cggcttcagg
     3121 ctcgacgagc gctggggcaa ggcctcgttc tggtgctggt tcgtcggttt ctacctcgcc
     3181 ttcatgccgc tctatgcggt gggcctgatg ggcatgaccc gccgcctgca gcactacgac
     3241 aatccggcct ggcagccgtg gctcatggtg gcggcgctcg gtgccgtggt gatcatggcc
     3301 ggcgtcgcct gccaggccat ccagctcgtc gtctcggtcc gcgcccgccg gcagctccgc
     3361 gacgcgacgg gcaatccctg gacgggccgc acgctggaat ggttcacgcc gtcgccgccg
     3421 ccggcctgga actttaccgt cctgccattg gtcggcggct ttgaccggcg gaagcatgcc
     3481 agagggacgc aggactacaa ggcgatcgaa atgcccaaca acagcccgat cggagtcatc
     3541 acggccttct tcgccgtcgt caccggcttt gccttgatct ggcacatctg gtggatggcg
     3601 ggactgggcc tgctcggcgc cttcgtcacg ctgcttgcct tcgccttccg ccgccaggag
     3661 gagatcgaag tgcccgccgt cgagatcgcc cgcttcgatc gcgctcatcc ggcggaggtc
     3721 acgccatgaa cgtcgccgtt gctctttccg atgtgcggcc ggaggtggcg gcaagcgaag
     3781 ccggcccggc gccgaagcgg gtcgtcgtcg cctacggctt ctggatcttc ctgctgagcg
     3841 acatcgtgat gttcgcgacg ctgtttgcgg gctatgccgt gttggcccgc gcgaccgacg
     3901 gcgggccgag cggcgtgcaa ttgttcagcc aggctagcgt cgccatcgaa acggcctgcc
     3961 ttcttgcctc gagttacacc tgcggactga tgtcgctggc ggtgaagtcg cggcgtcgcc
     4021 tcggcaccta tttcggcgcg ttcgtcacct tcgcactcgg cctggcgttc ctcgcgctcg
     4081 agcttcggga gttcgccgac atgatcgtcc gcggcgccgg cccgcagcgc agcgccttcc
     4141 tgtccgcctt cttcaccctt gtcggctgcc atgggctgca tgtgacggcc gggctggtct
     4201 ggctggtcgt gatgatggtc caggtggttc tcagaggctt tcatcccacc gtgcagcgtc
     4261 gcctggccag cttctccctg ttctggcacg cgctcgacat cgtctgggtg tggct
//
LOCUS       DASWGA010000332         3218 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2068556, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000332 DASWGA010000000
VERSION     DASWGA010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3218
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2068556"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1079
                     /locus_tag="VF991_08070"
     CDS             <1..1079
                     /locus_tag="VF991_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9556434.1"
                     /translation="KGKGYPPAEASADKYHGVVKFDVITGKQSKPVANAPAYQAVFAK
                     ALIAEAEADKKIVAITAAMPSGTSLDKFAERFPERCFDVGIAEQHGVTFAAGLACEGF
                     KPFAAIYSTFLQRGYDQVVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDVAYLGCL
                     PGFVVMAAADELELMHMVATAAQIDDRPSAFRYPRGEGVGVELPARGTPLEIGKGRIL
                     REGTKIAILNFGTRLAECLVAAEDLAAKGLSTTVADARFAKPLDTDLVRRLAREHEVL
                     ITIEEGAIGGFASHVLQDLATAGLLDHGLKVRPMILPDRFIDHASPARQYEEAGLSAP
                     AIVATALAALGRQALADRARPARS"
     gene            complement(1110..1772)
                     /locus_tag="VF991_08075"
     CDS             complement(1110..1772)
                     /locus_tag="VF991_08075"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX9556435.1"
                     /translation="MTLRINSTAPDFKAETTQGPIEFHKWIGDGWAILFSHPKDFTPV
                     CTTELGYMAGLKPEFDKRNTKIVGLSVDPVSNHAKWSKDIEETQGHAVTYPMIGDPEL
                     KVATAYDMLPEGAGTTSEGRTAADNATVRSVFIIGPDKKIKAMLTYPMSTGRNFDEVL
                     RLLESCQLTAKHQVATPVNWKKGEDVIIVPAVSDEAAKAKYPNGWKAPKPYLRIVPQP
                     KD"
     gene            complement(1838..2581)
                     /locus_tag="VF991_08080"
     CDS             complement(1838..2581)
                     /locus_tag="VF991_08080"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9556436.1"
                     /translation="MSTKLLEGERALVTGCAGGIGRGIARALKDEGATVLGSDIVAPP
                     AEDGIDFLAADLSKHDGWRGLLDGALKKLGTISLLVHAASPRRQEVDTPLSVSETTWD
                     AMTGVNLRSGFFLAREAGRHMRDNGIKGRILLITSQHREMPRNLPHYSASKAGMTMVM
                     KELARVLAPDGIRVNSIAPGAIPGGGFVAGNLDALVAQIPLGRAGTPDDIAQVAVAVL
                     SERFGRYVVGTTVEVDGGLGLISWIPSKT"
     gene            2618..3076
                     /locus_tag="VF991_08085"
     CDS             2618..3076
                     /locus_tag="VF991_08085"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9556437.1"
                     /translation="MDRIRPTLNQLNIVSGNPAASIDFYRRLGLDIPDQRVWRTRTGA
                     HHASAESVTASDGIDLDIDSTTFAQVWNTGWRGRADLAGRVVVGFRVASREEVDRLYD
                     EMTAAGSRGLQTPYDAFWGARYAVVEDPDGVAVGLMSPISAEHRAPPPEV"
BASE COUNT          502 a         1072 c         1095 g          549 t
ORIGIN      
        1 agaagggcaa gggctatccg ccggccgagg cgagcgcgga caagtatcac ggcgtggtga
       61 agttcgacgt catcacgggc aagcagtcca agccggtggc caatgccccg gcctatcagg
      121 cggtgttcgc caaggcgctg atcgccgagg ccgaggccga caagaagatc gtcgccatca
      181 ccgccgccat gccgtcgggc accagcctcg acaagttcgc cgagcgtttt cccgaacgct
      241 gcttcgacgt cggcatcgcc gaacagcacg gcgtgacctt cgccgccggg ttggcctgcg
      301 aggggttcaa gccgttcgcg gcgatctact cgaccttcct gcagcgcggc tacgaccagg
      361 tggtgcacga cgtcgccatc cagaagctgc cggtgcgctt tgccatcgac cgcgccggcc
      421 tggtcggcgc cgatggcgcc acccacgccg gctccttcga cgtcgcctat ctcggctgcc
      481 tgccgggctt cgtcgtcatg gcggcggccg acgagctcga gctgatgcac atggtggcga
      541 cagcggccca gatcgacgac cgcccctcgg ccttccgcta tccgcgcggc gagggcgtcg
      601 gcgttgaatt gccggcgcgc ggcacgccgc tcgagatcgg caaggggcgc atcctgcgcg
      661 agggcaccaa gatcgcgatc ctgaatttcg gcacccgcct cgccgaatgc ctggttgccg
      721 ccgaggatct ggcggccaag gggctcagca cgacggtggc cgacgcccgc ttcgccaagc
      781 cgctcgacac cgacctggtg cgccggctgg cgcgcgagca cgaggtgctg atcaccatcg
      841 aggagggtgc gatcggcggc ttcgccagcc acgtgctgca ggacctcgcg accgcgggcc
      901 tgctcgacca cggcctgaag gtgcggccga tgatcctgcc cgaccgcttc atcgatcacg
      961 cctcgccggc ccgccaatac gaggaggcag gcctcagcgc gccggcgatc gtggcgaccg
     1021 cgctggccgc gctcggccgc caagctcttg cggaccgcgc gcgtcccgcg cgctcttgat
     1081 ttcatgagcg cgcgcggtcc agcagaaggc tagtccttgg gctgcgggac gatgcgcagg
     1141 tagggtttcg gcgccttcca gccgttggga tacttggcct tggcggcctc gtcggagacg
     1201 gccgggacga tgatcacgtc ctcgcccttc ttccagttca ccggcgtcgc cacctggtgc
     1261 ttggccgtga gctgacagga ttcgaggagg cgcagcacct cgtcgaagtt gcggccggtg
     1321 ctcatcgggt aggtgagcat cgccttgatc ttcttgtccg ggccgatgat gaacaccgag
     1381 cgcacggtgg cgttgtcggc ggcggtgcgt ccctccgagg tcgtgcccgc accttccggc
     1441 agcatgtcgt aggcggtcgc gaccttgagc tcgggatcgc cgatcatcgg ataggtgacg
     1501 gcatgccctt gagtctcctc gatgtccttg gaccacttgg cgtggttcga caccggatcg
     1561 accgacaggc cgacgatctt ggtgttgcgc ttgtcgaact cgggcttcag gccggccatg
     1621 tagccgagct cggtcgtgca gaccggtgtg aagtccttgg gatgcgagaa caggatcgcc
     1681 cagccgtcgc cgatccactt gtggaactcg atcggaccct gggtcgtctc ggccttgaaa
     1741 tcaggcgcgg tagagttgat gcgaagcgtc atggtgaaac cccctcttga gagaaccctg
     1801 ctttcaagcg tgtaaatcga ccttccgcgc ggcctggtca agtcttggaa ggaatccagc
     1861 tgatcaggcc caggccgcca tcgacttcta ccgtcgttcc cacgacataa cggccaaatc
     1921 tttccgacaa gaccgcgaca gcgacctggg caatgtcgtc cggcgtgccg gcgcggccga
     1981 gcgggatctg cgccaccagg gcgtcgaggt tgccggcgac gaagccgccg cccgggatgg
     2041 cgccaggcgc gattgaattg acccggatgc cgtcgggcgc cagcacgcgg gcaagctcct
     2101 tcatgaccat ggtcatgccg gccttcgagg cgctgtagtg cggcaggttg cgcggcatct
     2161 cgcgatgctg cgaggtgatt aacaggatgc gccccttgat gccgttgtcg cgcatgtggc
     2221 ggccggcctc gcgggcgagg aagaagcccg agcgcagatt gacgccggtc atggcgtccc
     2281 aggtcgtctc cgacacggac agcggcgtat cgacctcctg gcggcgcggg ctcgcggcat
     2341 ggaccaacag cgagatcgtg ccgagctttt tcagcgcgcc gtcgagcagg cccctccagc
     2401 cgtcatgctt tgaaagatcg gcggcgagaa agtcgatgcc gtcctcggcc ggtggggcga
     2461 cgatatcgct gcccagcacc gtggcgcctt cgtctttgag cgccctggcg atgccgcggc
     2521 cgatgccgcc ggcgcaaccc gtgaccaggg cgcgttcgcc ctccagaagc ttcgtgctca
     2581 tgctaaacgt tctctgcctt cgatcgggag tgagcccatg gaccggatac ggccgaccct
     2641 gaaccagttg aacattgtaa gcggcaatcc tgcggcttcc atcgacttct atcgccggct
     2701 cggcctcgac attcccgacc aaagggtgtg gcgcacgcga acaggcgcgc atcatgccag
     2761 tgccgagagc gtcacggcat cggacggcat cgatctcgac atcgacagca cgaccttcgc
     2821 ccaggtctgg aacacgggat ggcgcggccg tgcggatctc gccggccgcg tggtcgtggg
     2881 cttccgcgtc gcctcgcgcg aggaggtcga ccggctctac gatgagatga ccgcggccgg
     2941 ttctcgcggc ttgcagacgc cctacgacgc cttctggggt gcgcgatacg ccgtcgtcga
     3001 ggacccggat ggcgtggccg tgggcctcat gagcccgatt tcggccgagc atcgcgcgcc
     3061 accgccggaa gtctaggagg cggcgtggcc aagacacggc tcgatgtggc gctggtcgag
     3121 cgcgggctgg cggagacgcg cagcgtcgcg caacgcatgg tcatggccgg gcttgtgttc
     3181 tcgggtgagc gccgtctcga caagccgggc cacgccgt
//
LOCUS       DASWGA010000333         1518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_420815, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000333 DASWGA010000000
VERSION     DASWGA010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420815"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(216..>1518)
                     /gene="glmS"
                     /locus_tag="VF991_08090"
     CDS             complement(216..>1518)
                     /gene="glmS"
                     /locus_tag="VF991_08090"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEX9556438.1"
                     /translation="GSSLAVGYGDGEMYIGTDALALAPFTKRVTYLEDDDWVVLNAEG
                     ATIFQGREEVKREIRQSGISGAMMGKGNHRHFMLKEIYEQPAVIGDTLHTYLAPGTRS
                     VSLPALPFDWTTVTRLTMTACGTACFACMVAKYWFEKLARLPVEVEVASELRYREPPL
                     PEGGVCIAVSQSGETIDTLAALRYAKAQKQTILSVVNVPESAIARESHVVLPTLAGPE
                     IGVASTKAFTTQLTVLLAAAIAAGRARGTLSSAEEERLTHAMIELPAQVNEALNMEEQ
                     YRRIAEDILAEARDVLYMGRGLSFPIALEGALKLKEISYIHAEGYAGGEMKHGPIALI
                     DEAVPVVVVAPTDAIFDKTASNFEQVKARGGKLVLLSDAAGNARLARHAAAAISLPTV
                     DPMVAPILYTVPVQLLAYYTAVAKGTDVDQPRNLAKSVTVE"
BASE COUNT          241 a          502 c          506 g          269 t
ORIGIN      
        1 ggcgccgtcg ccgaacgcgc agagaagcgc gttgccgtca gagaaattcg tcacatcaaa
       61 cccgtgatcg gcaagctcgt tgctcaccgc ctcacggtag tcgtcgtcat cttcgacgaa
      121 cacgactcga attctgctca tgttcctgac tagggataca tggttcgcat ggcatgagaa
      181 caagcgagca ctatgcgatc ctcggtagtt ataggctact cgaccgtcac gctcttggcg
      241 aggttgcgcg gctggtcgac gtcggtgcct ttggcgactg ccgtgtagta ggcgagcagc
      301 tgcaccggca cggtgtagag gatcggcgcc accatcggat cgaccgtcgg caggctgatc
      361 gccgccgccg cgtggcgggc cagccgggcg ttgcctgccg catcgctcag cagcaccagc
      421 ttgccgccgc gcgccttgac ctgctcgaag ttggatgccg tcttgtcgaa gatggcgtcg
      481 gtcggcgcca ccaccaccac cggcaccgcc tcgtcgatca gcgcgatcgg accgtgcttc
      541 atctcgccgc cggcatagcc ttcggcgtgg atgtaggaga tctctttcag cttcagcgcg
      601 ccttccagcg cgatcgggaa ggataagcca cggcccatgt aaaggacgtc gcgcgcctcg
      661 gcgaggatgt cctcggcgat gcggcggtac tgctcctcca tgttcagcgc ctcgttgacc
      721 tgtgccggca gttcgatcat ggcgtgggtc aggcgctcct cttcggcgct ggacagcgtg
      781 ccgcgggcgc ggccggcggc gatggcggcg gccagcagca cggtgagctg ggtggtgaac
      841 gccttggtcg aggcgacgcc gatctcggga ccggccagcg tcggcagcac gacatgcgat
      901 tcgcgggcga tggcgctttc gggaacgttg accaccgaca ggatggtctg cttctgcgcc
      961 ttggcgtaac gcagcgccgc cagggtgtcg atcgtctcgc ccgactgcga gacggcgatg
     1021 cacacgccgc cctcgggcaa cggcggctcg cggtagcgca gctccgaggc gacctcgacc
     1081 tcgaccggca ggcgcgccag cttctcgaac cagtacttcg ccaccatgca ggcaaagcac
     1141 gccgtgccgc acgcggtcat ggtgaggcgc gtcaccgtcg tccagtcgaa cggcagggcc
     1201 ggcaggctca ccgagcgcgt gccgggggcg agataggtgt gcagcgtgtc gccgatcacc
     1261 gccggctgct cgtagatctc cttcagcatg aaatggcggt gattgccttt gcccatcatg
     1321 gcgccggaga tgccgctctg gcggatctcg cgcttcacct cctcgcgacc ctggaaaatc
     1381 gtggcgccct cggcgttcag caccacccag tcgtcgtcct cgaggtaggt cacgcgcttg
     1441 gtgaaggggg cgagcgccag cgcgtcggtg ccgatataca tctcgccatc gccgtagccg
     1501 accgcgagcg agctgccg
//
LOCUS       DASWGA010000334         2092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_44841, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000334 DASWGA010000000
VERSION     DASWGA010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44841"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1103)
                     /locus_tag="VF991_08095"
     CDS             complement(<1..1103)
                     /locus_tag="VF991_08095"
                     /inference="COORDINATES: protein motif:HMM:NF044718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556439.1"
                     /translation="MNRSTLAAVVVALMLGSGIAGYLIGRPADSVDQAPPSRTATTTV
                     PAAPSAPRPTTPTAPTPVVQPTAPNEPFAYRRLSIDSSRPEAEACLAFNKPLATGDVK
                     YGDYVRISPEVKSAVRVVDDRLCIGGLAYGQDYTVRMLAGLPGSDGAKLSDEMKVDVA
                     LGARPAVVTLPGKGFILPRGTTVGLPITTVNVSKVGIEVYRVNERAIDRFANDRYDAS
                     FPGSEPITQSWSLRGWLNGTNGVRQWRGTMEVRNPPNQPVVTAFPIRETIKDWKPGAY
                     FVVVWNTAKPPSRNDDDDDESSGGTAAGMWVMDTDIALTSFTGQDGLNVFARSLQSAQ
                     PLAGLEVVLLTRGNEPVAKAITAADGRVNFAAGL"
     gene            1294..1725
                     /locus_tag="VF991_08100"
     CDS             1294..1725
                     /locus_tag="VF991_08100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1489 domain-containing protein"
                     /protein_id="HEX9556440.1"
                     /translation="MALHLIKLAVGVDDLAHMKKVQAARRKQRRQSPRSPHWVYTRNT
                     PRRADELLAGGSLYWVVRGVIRCRQELVGFEEDFDKDNGKKYCRIKVKRTLVPTAPRT
                     CKAFQGWRYFESERVPPDLSNGDTADMPAEMAAELKRLGLL"
     gene            complement(1742..>2092)
                     /locus_tag="VF991_08105"
     CDS             complement(1742..>2092)
                     /locus_tag="VF991_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007007084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9556441.1"
                     /translation="QSEVLFPSGSAQLQPGGEKQLASVAQRLMEIGSRIPKNINWVLQ
                     VDGHTDDKPINNVIYPSNWELSAARAIAVVKFLHSEGIPNDRLVAAGYGEYQPLSTID
                     TARNRRIELKLTSR"
BASE COUNT          351 a          662 c          728 g          351 t
ORIGIN      
        1 agcccggcgg cgaaattgac acggccgtcg gcggccgtga tcgccttggc gaccggttcg
       61 ttgccgcgcg tcagcagcac gacctcgagg ccggcgagcg gttgggcgct ttgcagggag
      121 cgggcgaaga cattgaggcc gtcctggccg gtgaagctgg tgagggcgat gtcggtgtcc
      181 atcacccaca tgccggcggc cgtgccgccg gacgactcgt cgtcatcgtc gtcgttgcgc
      241 gatggcggct tggcggtgtt ccacaccacg acgaaataag cgccaggctt ccaatccttg
      301 atcgtctcgc ggatcgggaa ggcggtgacc accggctggt tgggcggatt gcgcacttcc
      361 atcgtgcccc gccactggcg gacgccgttc gtgccgttca accagccgcg cagcgaccac
      421 gactgggtga tcggttcgga accggggaac gaggcgtcgt aacgatcgtt ggcgaaacgg
      481 tcgatcgccc gctcattgac ccggtagacc tcgatgccga ccttggagac gttgacggtg
      541 gtgatcggca ggccgaccgt ggtgccgcgc ggcaggatga agcccttgcc cggcagcgtg
      601 acgaccgccg ggcgggcgcc cagcgccacg tcgaccttca tttcatcgct gagcttggcg
      661 ccgtcgctgc ccggcaagcc cgcgagcatc ctcaccgtat aatcctgacc gtaggcgagg
      721 ccgccgatgc acaggcggtc gtcgaccacg cgcaccgccg acttcacctc cggcgagatg
      781 cggacatagt cgccgtactt cacgtcgccg gtcgccagcg gcttgttgaa ggcgaggcag
      841 gcttcggctt cgggccggct gctgtcgatc gaaagacggc gataggcgaa gggctcgttg
      901 ggcgcggttg gctggacgac cggggtgggc gccgtcggcg tcgtcgggcg tggcgccgaa
      961 ggggctgccg gcacggtcgt ggtggcggtc cgcgacggcg gcgcttgatc gacggagtcg
     1021 gcgggtcgac cgatgaggta gcctgcgatt cccgagccca gcatcaaagc cacgaccacg
     1081 gcagccagcg tcgaccgatt catgaagacc cccgcagaaa gcgctcgaac gcagaaagcg
     1141 ctcgaactct atgccgtcaa ttgtgcaaac actgtggagt ctgacgtcga agttgcgaat
     1201 cttccagcgc tgtggcgcgc atatcacgcc gccggccggg ctgtggacag gaccggcttg
     1261 agccggtacc ggatagcgta ctaagcgcga atgatggcgt tgcatctgat caagctggcg
     1321 gtcggcgtcg acgacctcgc ccacatgaag aaagtccagg ccgcccggcg caagcagcgc
     1381 cggcaaagcc cgcgctcgcc gcactgggtc tacacccgca atacgccgcg gcgagcggac
     1441 gagctgctgg ccggcggttc gctctactgg gtggtgcgcg gcgtcatccg ctgccgccag
     1501 gaactggtcg gcttcgagga ggatttcgac aaggacaacg gcaagaagta ctgtcgaatc
     1561 aaggtcaagc gcaccctcgt cccgaccgcg ccacggacct gcaaggcctt ccagggctgg
     1621 cgctacttcg agtccgagcg cgtcccaccc gacctgtcga acggcgacac cgccgacatg
     1681 ccggcggaaa tggcagcgga actgaaacga ctcgggcttt tgtagtcctt gcttgagcgc
     1741 gctagcggct ggtcagcttc agctcgatac gccggttgcg ggcggtgtcg atggtcgaca
     1801 gcggctggta ctcgccatag cccgcggcga ccaggcggtc gttgggaatg ccctcgctgt
     1861 gcaggaattt cacgacggcg atcgcgcgcg cggcggacag ttcccagttt gacgggtaga
     1921 tcacgttgtt gatcggcttg tcgtcggtgt gaccgtcgac ctggagaacc cagttgatgt
     1981 tcttggggat tcgcgagccg atctccatca gccgctgggc gacgctggcg agctgcttct
     2041 cgccgcccgg ctgcaattgg gccgagccgg agggaaacag cacctcggac tg
//
LOCUS       DASWGA010000335         2779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2448793, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000335 DASWGA010000000
VERSION     DASWGA010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2779
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2448793"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /locus_tag="VF991_08110"
     CDS             <1..703
                     /locus_tag="VF991_08110"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX9556442.1"
                     /translation="DPDVDRDMEMVKRLYGEGLRLFKMKTGFAGHAADLRRMERFRKE
                     LPADAELRIDYNQGMAAHDAIRQLRDVEAFRPTFIEQPVPGHHRAALAEITRALDTPV
                     LADESVFTPTDALQVAAGRMADLVSIKIMKHGGMLAGRKVAAICEAAGIACYGGDMFE
                     TGIAHLAGTHLIAATPNISLGCEFYQAKYFLERDLLAEPFPIENGRVIVPKTPGLGVK
                     VDEDRVRHYAVETLK"
     gene            831..1676
                     /locus_tag="VF991_08115"
     CDS             831..1676
                     /locus_tag="VF991_08115"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9556443.1"
                     /translation="MTIRRRDIAAAGIAAATLAAVSAVPARAQSKTESTWDLIKRTGK
                     VRMGIFDYPPYFLRDKASGEWAGAMVEMAKDIAKELDVKLEMVDVGGFGEAVLSLQSN
                     KVDMNFGLQATPKRATAIDFAGPIYWIEWVTVNNPKFKGKVWADYNKPEVKVAVMQGT
                     SDELLLRKIAPNATRVEFKEISQVVLAVSSGRADAFTTTVLASMVAKAKNPGLGDFVN
                     PTPRIALPGYIGMRLEDDSRWQKFLNRWAEWNIMLGYNEARMKASLKTLGIDEIPSTV
                     SFSPN"
     gene            1676..>2779
                     /locus_tag="VF991_08120"
     CDS             1676..>2779
                     /locus_tag="VF991_08120"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9556444.1"
                     /translation="MEKTVTVIGAGIVGVCCALHLQRQGFKVRLVEKGEPGRAASFGN
                     SGSFGTASCVPFAMPGVLKKVPRMLFDPDSPLKLRWSHVPKALPWFLRFIEAARPSRV
                     EAIAAARNSLLVHTHEGYAPLIEGADASKWVDSNGLMMVFESEAAFEGAAYALDLRRR
                     HGVHMDILDGNEARQMEPALSSKVIKAVSLPDVHRTIDPFRLTSALTADFVRKGGEIV
                     KADVRGFEIGSAGPTKVHTDWGAMAVDTVVIAAGVWSRPLAAQLGTHVPLEAERGYHV
                     MFANQDFALRRAIVSADRNVSLAHMVEGIRATGIAEFAAPDAPPDMANARLVQRHAQA
                     LVPGLKGEPASQWMGPRPSHPDSKPVIGRSPRHA"
BASE COUNT          489 a          933 c          923 g          434 t
ORIGIN      
        1 agatcccgat gtcgaccgcg acatggaaat ggtgaagcgg ctctatggcg agggcctgcg
       61 gctgttcaag atgaagaccg gattcgcggg ccatgccgcg gacctcaggc gcatggagcg
      121 cttccgcaag gagctgccgg ccgatgccga gctgcgcatc gactataacc agggcatggc
      181 ggcccacgac gcgatccgcc agctgcgcga cgtcgaggcg ttccggccga ccttcatcga
      241 gcagccggtg ccgggtcacc atcgcgccgc gctggccgag atcacccgcg cgctcgatac
      301 gccggtgctg gccgacgaga gcgtgttcac gccgaccgac gcgctgcagg tcgccgcggg
      361 ccgcatggcc gacctggtca gcatcaagat catgaagcat ggcggcatgc tggccggccg
      421 caaggtggcg gcgatctgcg aggccgccgg catcgcctgc tatggcggcg acatgttcga
      481 gaccggcatt gcccacctcg ccggcacgca cctgatcgcc gccacgccca acatctcgct
      541 gggctgcgag ttctaccagg ccaagtactt ccttgagcgc gacctcctgg ccgagccgtt
      601 tcccatcgag aacggccgcg taatcgtgcc taaaacgccc ggacttggcg tcaaggtgga
      661 cgaagatcgc gtcaggcact acgcggtgga gaccttgaag tagccgtcgc cgacggagcg
      721 ggcttggcgc acgtcttgcg tcacggtcgg gcggcaccta gacttttacc tgcgcaggaa
      781 cggggcctgc cgccaacggg acgaacaatc gatccaacaa gggggcacac atgactatcc
      841 gtcgtcgtga catcgccgcc gcgggcatcg ccgcggccac gctcgcggcc gtaagcgccg
      901 tgccggcgcg cgcgcaatcc aagaccgaat cgacctggga cctgatcaag cgcaccggca
      961 aggtgcgcat gggcatcttc gactatccgc cttatttcct gcgcgacaag gcgagcggcg
     1021 aatgggccgg cgccatggtc gagatggcca aggacatcgc caaggagctc gacgtcaagc
     1081 tcgagatggt cgacgtcggc ggcttcggcg aggcggtgct gagcctgcaa tccaacaagg
     1141 tcgacatgaa tttcggcctg caggcgacgc ccaagcgcgc caccgccatc gacttcgccg
     1201 ggccgatcta ctggatcgaa tgggtgacgg tcaacaaccc gaagttcaag ggcaaggtgt
     1261 gggccgacta caacaagccc gaggtcaagg tcgcggtcat gcagggcaca tcggacgagt
     1321 tgctgctgcg caagatcgcg cccaatgcca cgcgcgtcga attcaaggag atatcgcagg
     1381 tggtgctggc cgtctcgtcg ggtcgcgccg acgccttcac caccaccgtg ctggccagca
     1441 tggtggccaa agcgaagaat cccggcctcg gcgacttcgt caacccgacg ccgcgcatcg
     1501 cgctgcccgg ctacatcggc atgcgactgg aggacgattc gcgctggcag aaattcctca
     1561 accgctgggc cgagtggaac atcatgctgg gctacaacga ggcccgcatg aaggcgtcgc
     1621 tcaagacgct gggcatcgac gagatcccgt cgaccgtctc gttctcgccc aactgatgga
     1681 aaaaaccgtc accgtgatcg gcgccggcat cgtcggcgtc tgttgcgcgc ttcacctgca
     1741 acgacaaggc ttcaaggtcc ggctggtcga gaagggcgag cccggcaggg cggcgtcgtt
     1801 cggcaattcc ggcagcttcg gcaccgcctc gtgcgtgccc ttcgctatgc ccggcgtcct
     1861 gaaaaaggtg ccgcgcatgc tgttcgatcc cgactcgccc ttgaagctgc gctggagtca
     1921 cgtgcccaag gcgctgccgt ggttcctgcg cttcatcgag gcggcgcggc cgtcgcgggt
     1981 cgaggcgatc gccgccgcgc gcaacagcct gctggtgcac acccatgaag gctatgcgcc
     2041 cttgatcgaa ggtgccgacg ccagcaaatg ggtcgacagc aacggcttga tgatggtctt
     2101 cgagagcgag gcggccttcg agggggctgc ctacgcgctc gatctcaggc gccgtcacgg
     2161 cgtgcacatg gacatcctcg acggcaacga ggcgcggcaa atggagccgg cgctgtcgag
     2221 caaggtcatc aaggcggtgt cgctgcccga cgtccaccgc accatcgatc cgtttcgcct
     2281 gacctcggca ctgaccgccg acttcgtgcg caagggcggg gagatcgtca aggccgacgt
     2341 ccgcggcttc gagatcggca gtgcggggcc gaccaaggtc cataccgact ggggcgcgat
     2401 ggcggtcgac acggtggtga tcgcggccgg tgtgtggtcg cgccccctgg cggctcagct
     2461 cggcacgcac gtgccgctcg aggcggagcg cggctatcat gtgatgttcg ccaaccagga
     2521 cttcgcgctg cggcgcgcca tcgtctcggc cgaccgcaat gtctcgctgg cccacatggt
     2581 cgaaggcatt cgcgccaccg gcatcgccga gttcgccgcc cccgacgctc cgcccgacat
     2641 ggcgaacgcc cgcctggtgc agcgccatgc ccaggcgctg gtcccgggac tgaagggcga
     2701 gcctgcttcg caatggatgg ggccgcgtcc atcgcatccg gattccaagc cggtgatcgg
     2761 ccgctcgccg cgccacgcc
//
LOCUS       DASWGA010000336         3039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_669151, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000336 DASWGA010000000
VERSION     DASWGA010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_669151"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /locus_tag="VF991_08125"
     CDS             complement(<1..845)
                     /locus_tag="VF991_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9556445.1"
                     /translation="MVEATSDGYANALRREIMRSEIQRVRVLAVILAILLVAALSAVT
                     LFPGFAQRMFHGGIEPWVLLAGFGPFLLYEIVVLLVLRRRAAQDKDFPRPARFANAFI
                     ETSLPSVVIFVLSHHMEPTTVFGYWPPMLYLLFILLSTLRLDFWLSLWTGAVAAVEQA
                     VLAVWLMPLVAFAERPENTLVYHFSRSILLLAAGIVAGIVAGSLRRQFEKSVAATAAR
                     DRITNLFGQHVSPAVVDRLLATQTDPPSEMREVCVLFLDIRGFTAMTRMRPADQTVAL
                     LNDFFA"
     gene            911..1972
                     /locus_tag="VF991_08130"
     CDS             911..1972
                     /locus_tag="VF991_08130"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /protein_id="HEX9556446.1"
                     /translation="MPVREIARELQGKAANLALRMPISWVNILAGPPVTVDGRTLDAR
                     TQWFLQLLARSGQVPIETMSVAHARAEFDAFLPLLAGKAAPVGEILDRTIDGPAGRLR
                     IRIYRPAGSVARLLPTILYFHGGGWTIGSLEAYDLPCRFFCARTGCALVAVDYRLAPE
                     HKFPAAIDDAVAAFRWLAAEAIAFGIDAARIVIAGDSAGGTIAAVAARLLRDEARPPC
                     LQWLIYPATDLAMRSPSYKSCGEGFLLTHAGMTWFRGHYLNDLSETDDPRASPLHAND
                     LSGLPPALIYTAGFDPLRDEGQAYAERLSAAGVKTIHREFDSLIHGFAGMRGALQAAA
                     RAMDDMVAGLRHELAQLGR"
     gene            1989..2624
                     /locus_tag="VF991_08135"
     CDS             1989..2624
                     /locus_tag="VF991_08135"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9556447.1"
                     /translation="MDEETTVTPEQRERSGRREQNKAENRTALLKAARAVFAEMGYGA
                     ASVRDIVRRTDLAPGTFYNYFKDKDEIFEAVVGELTGELLKRHREGRGKASTAEEFFR
                     RHYAVYFEFIVEDAELLALARKNFTAIRTLLDKPDVRALALALNEDIRAVRAQGILPD
                     VDVSYLAASMAGVAFEISMVMVARDPVDPVAATEFATRLMMGGIDRVPRKA"
     gene            complement(2641..>3039)
                     /locus_tag="VF991_08140"
     CDS             complement(2641..>3039)
                     /locus_tag="VF991_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX9556448.1"
                     /translation="ACFNDGSVRDWQRKSGGQFTLGKNFDGTGGFGPDIVTSDELPPG
                     AAPLRIMTRVNGQVMQDSNTDDLIFDVPTLVHELSKVMTLDPGDIIITGTPSGVAMAR
                     NPQPWLKPGDVCEVEIEKIGVLRNPIVQGA"
BASE COUNT          486 a         1044 c         1048 g          461 t
ORIGIN      
        1 gcgaagaagt cgttcagcag cgccaccgtc tggtcggcgg gccgcatgcg cgtcatggcg
       61 gtgaagcccc tgatgtcgag gaacagcacg cacacttcgc gcatctcgct cggcgggtcg
      121 gtctgggtgg cgagcagccg atcgaccacg gccggcgaga cgtgctggcc gaacaggttg
      181 gtgatgcggt cgcgcgccgc ggtcgcggcc accgacttct cgaactgccg gcgcaggctg
      241 ccggcgacga tgccggccac gatgcccgcg gccaggagca ggatgctgcg gctgaaatgg
      301 tagaccagcg tgttctccgg cctctcggcg aaggccacca ggggcatcag ccagacggcg
      361 agcacggcct gctcgacggc agcgaccgcg cctgtccata gcgacagcca gaaatcgagc
      421 cgcagcgtcg acagcaggat gaacaggaga tagagcatcg gcggccagta gccgaacacc
      481 gtcgtcggct ccatgtggtg gctgagcacg aagatgacga cgctcggcag gctggtctcg
      541 atgaaggcgt tggcgaagcg tgccggcctc gggaagtcct tgtcctgggc ggcgcgccgg
      601 cgcagcacca acagcaccac gatctcgtag agcaggaatg gcccaaagcc ggccaacagc
      661 acccagggtt cgatgccgcc gtggaacatg cgctgggcga acccgggaaa cagggtgacg
      721 gcgctcaggg cggcgaccag caggatcgcc aggatgacgg cgagaacccg cacacgctgg
      781 atctcgctgc gcatgatctc gcgccggagc gcgttggcat agccgtctga ggtcgcttcg
      841 accatcgccc gccaacctac cgagccggcg caggctccac aacggcaggt ggggatgcta
      901 ggaacggctc atgccggtga gggagatcgc gcgcgaactg cagggcaagg ccgccaacct
      961 ggccctgcgc atgccgattt cgtgggtcaa tatcctggcc ggaccgccgg tgacggtcga
     1021 cggccgcacc ctcgacgccc gcacccagtg gttcctgcag ttgctggcgc gcagcggcca
     1081 ggtgccgatc gagaccatga gcgtggccca tgcccgcgcc gagttcgacg ccttcctgcc
     1141 cctgctggcg ggcaaggccg caccggtggg cgagatcctc gaccgcacca tcgacgggcc
     1201 ggccggccgc ctgcgcatcc ggatctaccg tcccgccggc agcgtggcgc ggctgttgcc
     1261 gaccatcctc tatttccatg gcggcggctg gacgatcggc agcctcgaag cctacgacct
     1321 gccgtgccgc ttcttctgcg cccgcaccgg ctgcgcgctg gtcgccgtcg actatcgcct
     1381 ggcccccgag cacaagttcc cggctgccat cgacgacgcg gtcgcggcct tccgctggct
     1441 ggcggccgag gcgatcgcgt tcggcatcga tgccgcgcgc atcgtgatcg ccggcgactc
     1501 ggccggcggc actattgccg ccgtcgccgc ccggctgttg cgcgatgagg cgcggccgcc
     1561 ctgcctgcag tggctgatct atcccgccac cgatctcgcg atgcgaagcc cgtcatacaa
     1621 gagttgcggc gagggtttcc tgctgaccca tgccggcatg acgtggttcc gcggccacta
     1681 tctcaacgac ctgagcgaga ccgacgatcc gcgcgcctcg ccgctgcacg ccaacgacct
     1741 ttcggggctg ccgccggcct tgatctacac ggcgggtttc gatccgctgc gcgacgaagg
     1801 ccaagcctat gccgagcggc tgtcggccgc cggcgtgaag accatccatc gcgagttcga
     1861 ctcgctgatc cacggtttcg ccggcatgcg tggcgccctg caggcggcgg cgcgggcgat
     1921 ggacgacatg gtggccggcc tgcgccacga actggcgcag cttggacgat gagagcggga
     1981 cgttgagcat ggacgaagag accaccgtca cgccggagca acgcgagcgc tcgggccggc
     2041 gcgagcagaa caaggcggag aaccgcaccg ccctgctcaa ggccgcccgc gcggttttcg
     2101 ccgagatggg ctatggcgcg gccagcgtgc gcgacatcgt gcgccgcacc gatcttgcgc
     2161 cgggcacctt ctacaactac ttcaaggaca aggacgagat cttcgaggcg gtggtcggcg
     2221 agctgaccgg cgagcttttg aagcgccatc gcgagggacg cggcaaggcc agcacggccg
     2281 aggaattctt ccgccgccac tacgcagtct atttcgagtt catcgtcgag gacgccgagc
     2341 tgctggcctt ggcgcgcaag aacttcacgg ccatccgcac cctgctcgac aagcccgacg
     2401 tgcgcgcgct ggcgctggcg ctgaacgagg acatccgcgc cgtgcgggcg cagggcatcc
     2461 tgcccgatgt cgacgtgtcc tacctcgccg cctcgatggc gggcgtcgcc ttcgagatct
     2521 cgatggtcat ggtcgcgcgc gacccggtcg acccggtcgc cgccaccgag ttcgccaccc
     2581 gcttgatgat gggcggcatc gaccgcgtgc cgcgcaaggc ttgactgctg ggggcgaaga
     2641 ctacgccccc tgcacgatcg gattgcgcag cacgccgatc ttctcgatct cgacctcgca
     2701 gacgtcgccc ggcttcagcc agggctgcgg gttgcgcgcc atcgccacgc ccgagggcgt
     2761 gccggtgatg atgatgtcgc ccggatcgag cgtcatgacc ttgctgagct cgtgcaccag
     2821 ggtcggcacg tcgaagatca ggtcgtcggt gttgctgtcc tgcatgacct ggccgttgac
     2881 gcgggtcatg atgcgcagcg gcgcggcgcc gggcggcagc tcgtcggacg tcacgatgtc
     2941 ggggccgaag ccgccggtgc cgtcgaagtt cttgccgagg gtgaactggc cgcccgactt
     3001 cctctgccag tcgcgcaccg agccgtcgtt gaagcaggc
//
LOCUS       DASWGA010000337         8335 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2321229, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000337 DASWGA010000000
VERSION     DASWGA010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8335
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2321229"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VF991_08145"
     CDS             <1..520
                     /locus_tag="VF991_08145"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000428 - DNA-directed RNA polymerase
                     complex [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEX9556449.1"
                     /translation="IGLIPVDSVFSPVKRVSYKIENSRVGQVTDYDKLSMTVETNGTT
                     RPDDAVALAARILQDQLQLFINFEEPREVRKEEQQDDFPFNRNLLRKVDELELSVRSA
                     NCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLAGMGLHLGMEIPGWPPDN
                     IEEMAKRLEEPY"
     gene            542..964
                     /gene="rplQ"
                     /locus_tag="VF991_08150"
     CDS             542..964
                     /gene="rplQ"
                     /locus_tag="VF991_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016917738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEX9556450.1"
                     /translation="MRHGNRGRKFHRTAEHRKAMFMNLAGALIKHEQITTTLHKAKDL
                     RPIVEKLVSLGKRGGLHARRQAIGFLRDPYVADKLFTTLGPRYSKRNGGYLRVLKAGF
                     RFGDAAPMAVIEFVERDAAAKGQDSGPSAEQAEQQEAA"
     gene            1037..1501
                     /locus_tag="VF991_08155"
     CDS             1037..1501
                     /locus_tag="VF991_08155"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9556451.1"
                     /translation="MALTFRKAMSSERDEVERVLRAAFTPYVRALGRELSAAGYARLP
                     AELERGDIYVALEADRVVGVVRTERCDDGLFIDQIGVDPMQQGAGVGGWLLGRIEEVA
                     RLSGARGMSLYTAEMMEHLVRLYRRHGFEIVRRGPPDHGLDAHTRVHMVKSF"
     gene            complement(1498..2739)
                     /locus_tag="VF991_08160"
     CDS             complement(1498..2739)
                     /locus_tag="VF991_08160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX9556452.1"
                     /translation="MIELPADEAQAFARRFDLAALEPAFLDDPFPYYHALRRFAPLKR
                     LPDGSVFLSRYADVAVCYRDARMSSDKKAEFGPKFGVGTPLYRHHTTSLVFNDPPLHT
                     RVRKLLAAAFTPRALANLQPRIEAIVDGLLEEHAAKGRMDLVEDFAFRLPVEVICDML
                     GVPAGERAPFRRYSLAILGALEPVAGPERQATGNWAVAEFSAYLDDLIAERRTRPADE
                     RDVLGSLIHGEVDGERLTHDELVQNCIFLLNAGHETTTNLIGNTVDALLRFPDELRRL
                     KDNPGLLKSSIEEGLRFESSNQLGNRRLAADLEIGGERLAAGTYLHIGIGAANRDPAQ
                     FAEPDRFDAAREPNRHFAFGSGVHMCLGAVLARLEGTIAIGRLVGRFDGLARDGTPER
                     GGRARFRGFNRYPISWDRVLP"
     gene            complement(2748..4538)
                     /locus_tag="VF991_08165"
     CDS             complement(2748..4538)
                     /locus_tag="VF991_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX9556453.1"
                     /translation="MTYTAPLADMRFALREVAGLGHVAALPGYEHATDDTVDAVLEEA
                     AKLAANGLAPLNREGDKAGAKLENGVVRTAPGFVGIYKEFVDGGWNSLPFDPEFGGQG
                     MPWLLAATVQEMWQAANMGFGLVLLLNQGAIDAIHHHGSAEQKATYLPKMISGEWTGT
                     MNLTEPQAGSDLGQLKSRAVRTGDHYLVTGQKIFITYGEHDMADNIVHLVLARTPDAP
                     AGVRGISLFIVPKFLVGADGSPGPRNDLHCVSLEHKLGIHASPTCVMSFGDDGGAVGY
                     LVGEEGRGLSYMFTMMNNARLSVGIQGLAIAERAYQQAAAFAKTRVQSKDDGSAKPES
                     VSIIHHADVRRMLMTMRAQIEAMRALGYYTAAGIDGALKHPDKETARKTQDRVDLLIP
                     IVKAWFTDLGNEIASIGVQIHGGMGFIEETGAAQHLRDARILPIYEGTNGIQARDLVG
                     RKVAKDGGEAMLALVADMRALAEEMKSAPGDDLEVIRTALLASADALEDATKWVAQSV
                     KADLMAALAGSVPFLRLAGAALGGWLLAKSALAAQTKLATRDGDPTFLEAKLVTARFY
                     AEVVLPPALAQLGPIKAAGRTVFALTEAQL"
     gene            4561..5385
                     /locus_tag="VF991_08170"
     CDS             4561..5385
                     /locus_tag="VF991_08170"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX9556454.1"
                     /translation="MPRSVAFGDRLGYFQANMTNTVLLAIDGPRATITLNDPAKHNRL
                     DPAGLTLLRQAIAKADAEPDVRVTVLTGAGEKSFCSGYDLGSIPSGKAARPPDSEDSF
                     EKVMDRLEAMRMPTLCALNGSVYGGATDMALACDFRLGVKGMRFFMPAARFGLHYYPS
                     GLRRYTQKVSPSFAKRAFLLSEDFTDEDLLRVGYLDWLVERAEFQAKVDETASKLAGL
                     APLSMSNMKRAIEQFAQAEPDIPRIREGIRECQTSEDLREGLSALRERRAPAFKGR"
     gene            5410..6297
                     /locus_tag="VF991_08175"
     CDS             5410..6297
                     /locus_tag="VF991_08175"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9556455.1"
                     /translation="MQRRLAAIVHADLAGFTRMMEGAETRTFRHLKSAQIEVWRPAID
                     AASGRLVGTAGDAMLAEFGSAVTAVSAAIDIQERMARFNEALAAEQRMMFRVGVHLGE
                     VIVDDEDQNIFGDGVNLAARIQALAEPGGIAVSRAVRDLVELRIDYAFVDGGEHQVKN
                     VSRSVQVFHVRPAKAAVTIGTTTRMVPQITLRFEGIDSGNKKHAFEVALDKLISRSQG
                     MVIGRAADQCDLVVAHATVSRRHARLSLAGEALQVEDLGSTNGTAIGGKALSVGAPVV
                     LHAGNKLRLGDVELLVRQL"
     gene            6311..8164
                     /locus_tag="VF991_08180"
     CDS             6311..8164
                     /locus_tag="VF991_08180"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9556456.1"
                     /translation="MTGSTDEPPDTVSPPTSPDVDHVALKPGQMIGRYEIVSVLGQGG
                     FGITYRARDIQLDREVAIKEYLPSALAFRQDGVTVMPRTTKMADDFGWGRERFVTEGR
                     TLASLHRVPAIVRVFDFLQFNGTAYIVMELLHGETLEDRIAKNGKLTAEEVDRILWPL
                     LDGLEQVHNAGFLHRDIKPANILLDAAGNPTLIDFGASRAAMAGRSTPLTAIFTPGYA
                     AAEQMTSAKQGPWTDIYGVSATLYHAITGQRPPSAFDRMLNDGYQPLAQRDPAGFSPG
                     VLAGLDAGLAVAARERPQSIAGWRPILAMTAAPAADSTVAMDKAQPDGRPEGRHVPTL
                     PPPAAAAPKRSGLWIAAAVVLLALLGGGGYYAIASRGPDPEMVKARQAAEEAEARRLK
                     AEQEAAKLRIENEQRQKAEEIAAARKRQEEAEAAAKKQFEEDTRHKIEAEIAVQKRGE
                     EEAKRKAEEEAEARRKAIDDARKAVESVAGPFDHFGKTLMMIGLKDRPDEVRLQGVDI
                     VNDPALHKLAVDALAAQPRHLRCRQTDRLTDGTPLYRCLVTPLNAKEPLADIPDSDRL
                     DLALALVRTGLLLASCDAPRSYADAEDDARGRKQSLWGRVTVPEYKRRCTK"
BASE COUNT         1371 a         2825 c         2855 g         1284 t
ORIGIN      
        1 gatcggcctg atcccggtcg attcggtgtt cagcccggtc aagcgcgtct cctacaagat
       61 cgagaacagc cgcgtcggcc aggtcaccga ctatgacaag ctgtcgatga cggtcgagac
      121 caacggcacg acgcgtcccg acgacgccgt ggcgctggcc gcgcgcatcc tgcaggacca
      181 gctgcagctc ttcatcaact tcgaggagcc gcgcgaggtc cgcaaggagg agcagcagga
      241 cgacttcccg ttcaaccgca acctgctgcg caaggtcgac gagctcgaac tgtcggtgcg
      301 ctcggccaac tgcctgaaga acgacaacat catctatatc ggcgacctgg tgcagaagac
      361 cgaggccgag atgctgcgca ccccgaactt cggccgcaag tcgctgaacg agatcaagga
      421 agtgctggcc ggcatgggcc tccacctggg catggagatc ccgggctggc cgccggacaa
      481 catcgaggag atggccaagc ggctggaaga gccgtactag gccgccggga aggatttagt
      541 catgcgtcac ggaaatcgcg gtcggaagtt ccaccgcacc gccgagcatc gcaaggcgat
      601 gttcatgaat ctggccggcg ccctgatcaa gcacgagcag atcacgacca ccttgcacaa
      661 ggcgaaggac ctccgtccga tcgtcgagaa gctggtcagc ctcggcaagc gaggcggcct
      721 gcacgcccgc cgccaggcga tcggcttttt gcgcgatccc tatgtcgccg acaagctgtt
      781 cacgacgctg gggccccgct actccaagcg caacggcggc tacctgcgcg tcctcaaggc
      841 cggcttccgc ttcggcgacg cagcgccgat ggcggtgatc gagttcgtcg aacgtgacgc
      901 cgccgccaag ggccaggatt cgggtccgtc ggccgagcag gccgagcagc aggaagcggc
      961 gtaacgcgct tcgccagcaa cgaacaacgc ccgccggccc cgccgtcggg cgttttttgt
     1021 atgctattct ttcgtcatgg cgctgacgtt cagaaaggcg atgtcgtccg agcgcgacga
     1081 agtggagcgg gtcttgcgcg cggcattcac gccctatgtt cgtgccctgg ggcgcgagct
     1141 ttctgcggcg ggctatgcgc ggcttccggc ggagttggag cggggcgaca tctatgttgc
     1201 attggaggcc gaccgggtcg tcggtgtcgt caggaccgaa cggtgcgacg acgggctctt
     1261 catcgaccag atcggcgtcg atccgatgca acagggcgca ggcgtggggg gctggctgct
     1321 ggggcgaatc gaggaggtcg cgcgattgag cggcgctcgc ggcatgtcac tctacaccgc
     1381 cgagatgatg gagcacctcg tgcggcttta tcgcaggcat ggattcgaga tcgtccgccg
     1441 tggccctccc gatcatggcc tggatgccca tacgcgggtc cacatggtga agtcgttcta
     1501 ggggagaacc cggtcccagg agatcgggta gcggttgaag ccgcggaagc gggcgcggcc
     1561 gccgcgctcg ggcgtcccgt cgcgcgccag gccgtcgaac cgacccacga ggcggccgat
     1621 cgcgatcgtg ccttcgaggc gcgccagcac ggcgcccagg cacatatgca cgcccgagcc
     1681 gaaggcgaaa tgccggttgg gctcgcgcgc cgcatcgaac cggtcgggct cggcgaactg
     1741 cgcggggtcg cgattggccg cgccgatgcc gatatggagg taagtgccgg cggccagcct
     1801 ctcgccgccg atctcgaggt cggccgcgag ccggcgattg cccagctggt tggagctttc
     1861 gaagcgcagg ccttcctcga tgctgctctt gagcaggccg ggattgtcct tgagccgccg
     1921 cagttcgtcg ggaaagcgca gcagcgcgtc gaccgtgttg ccgatcaggt tggtcgtggt
     1981 ctcgtggccg gcgttcagca ggaagatgca gttctgcacc agctcgtcgt gcgtcagccg
     2041 ctcgccgtcg acctcgccgt ggatcaagct gcccagcaca tcgcgctcgt cggccggccg
     2101 cgtgcgccgt tcggctataa gatcgtcgag ataggccgag aactcggcca ccgcccagtt
     2161 gcccgtggcc tggcgctcgg gaccggccac cggctcgagc gcgcccagaa tggcgaggga
     2221 atagcggcgg aagggcgcgc gctcgcccgc cggcacgccc agcatgtcgc agatcacctc
     2281 gaccggcagg cgaaaggcga agtcctcgac caggtccatg cggcccttgg cggcgtgctc
     2341 ctccagcagc ccatcgacga tggcctcgat ccgcggctgc aggttggcca gcgcgcgcgg
     2401 cgtgaaggcc gcggccaaaa gcttgcgcac ccgcgtgtgc aagggcgggt cgttgaacac
     2461 caagctggtc gtgtgatggc ggtagagcgg tgtgccgacg ccgaactttg ggccgaactc
     2521 ggccttcttg tccgagctca tgcgggcatc gcggtagcac actgcgacgt cggcgtagcg
     2581 cgagaggaag acgctgccgt cgggcaggcg cttcagcggc gcgaagcgcc gcagcgcgtg
     2641 gtagtagggg aacggatcgt ccaggaacgc cggctcgagc gccgccaggt cgaagcgccg
     2701 ggcgaaggcc tgggcctcgt ccgccggcag ctcgatcagc cctcgggtca gagctgcgcc
     2761 tccgtcagcg caaacaccgt gcggccggcc gccttgatgg ggccgagctg ggccagcgcc
     2821 ggcggcagga cgacctcggc atagaaccgc gccgtcacca gcttggcctc gaggaaggtg
     2881 ggatcgccgt cgcgcgtggc gagcttggtt tgggccgcaa gcgcgctctt ggccagcagc
     2941 cagccgccca gcgccgcgcc ggccaggcgc aggaacggca ccgagcccgc cagcgccgcc
     3001 atgaggtcgg ccttgaccga ctgcgccacc cacttggtgg cgtcctccag tgcatcggct
     3061 gaggcgagca gggcggtgcg gatcacctcg aggtcgtcgc cgggcgccga tttcatctcc
     3121 tcggccagcg cgcgcatgtc ggcgaccagc gccagcatgg cctcgccgcc gtccttggcg
     3181 accttgcggc ccaccaggtc gcgcgcctgg atgccgttgg tgccttcgta gatcggcagg
     3241 atgcgcgcat cgcgcagatg ctgggcggcg ccggtctcct cgatgaagcc catgccgccg
     3301 tggatctgca cgccgatcga ggcgatctcg ttgccgaggt cggtgaacca cgccttgacg
     3361 atggggatca acaggtcgac gcggtcctgc gtcttgcgcg ccgtctcctt gtcgggatgt
     3421 tttagcgcgc cgtcgatgcc ggccgcggtg tagtagccca gcgcgcgcat cgcctcgatc
     3481 tgggcgcgca tggtcatcag catgcgcctg acgtcggcgt gatggatgat cgagaccgac
     3541 tcgggcttgg cgctgccgtc gtccttggac tgcacccttg tcttggcgaa ggccgccgcc
     3601 tgctggtagg cccgctcggc gatggccagg ccctggatgc cgaccgacag gcgggcgttg
     3661 ttcatcatcg tgaacatgta ggaaaggccg cggccttcct cgccgaccag gtagcctacc
     3721 gcgccgccgt cgtcgccgaa ggacatgacg caggtcgggc tggcatggat gccgagcttg
     3781 tgctcgagcg acacgcagtg caggtcgttg cgcgggcccg gcgagccgtc ggcgccgacc
     3841 aggaacttcg ggacgatgaa cagcgagatg ccgcggacgc cggccggcgc gtcgggcgtg
     3901 cgcgccagca ccaggtgcac gatgttgtcg gccatgtcgt gctcgccgta ggtgatgaaa
     3961 atcttctggc cggtgacgag ataatggtcg cccgtcctca ccgcgcggct cttgagctgg
     4021 cccaggtccg agcccgcctg cggctcggtg aggttcatgg tgccggtcca ttcgccggag
     4081 atcatcttcg gcagataggt cgctttctgc tcggccgagc cgtgatggtg gatggcgtcg
     4141 atcgcgccct ggttcaagag cagcaccagc ccgaagccca tattggccgc ctgccacatt
     4201 tcctgcaccg tggcggcaag cagccacggc atgccctggc cgccgaattc ggggtcgaaa
     4261 ggcagcgaat tccagccgcc gtcgacgaat tccttgtaga tgccgacaaa gcccggggcg
     4321 gtgcgcacca cgccgttctc gagcttggcg ccagctttgt cgccttcgcg gttgagcggc
     4381 gccaggccgt tggcggcgag cttggcggcc tcctcgagca cggcatcgac cgtgtcgtcg
     4441 gtcgcatgct cgtagcccgg cagggccgcg acgtgcccca ggccggccac ttcgcgcagc
     4501 gcgaaacgca tatcggccag cggggcggta taggtcatgg gcttccctcc ggactgcaat
     4561 atgccgcgct cggtcgcttt tggcgaccgg ctcggctatt ttcaggccaa catgaccaac
     4621 accgttctgc tcgccatcga cggcccgcgg gccaccatca cgctcaacga tccggccaag
     4681 cataaccgcc tcgatccggc cggcctcacc ctgctgcgcc aagccatcgc caaggccgac
     4741 gccgagcctg atgtccgggt caccgtgctc accggcgcgg gcgagaagag cttctgctcg
     4801 ggctatgacc tgggctcgat tccctcgggc aaggcggcgc ggccgcccga cagcgaggac
     4861 agtttcgaga aggtcatgga tcgcctcgag gcgatgcgca tgccgaccct gtgcgcgctc
     4921 aacggcagcg tctatggcgg cgcgaccgac atggcgctgg cctgcgactt ccggctgggc
     4981 gtcaagggca tgcgcttctt catgccggcg gcgcgcttcg gcctgcatta ctatccgagc
     5041 gggctgcgcc gctacaccca gaaggtgagt ccgagctttg ccaagcgcgc cttcctgttg
     5101 tcggaggatt tcaccgacga ggacctgttg cgggtgggct atctcgactg gctggtcgag
     5161 cgggccgagt tccaggccaa ggtcgacgag accgcgtcca agctcgcggg cttggcaccg
     5221 ctttcgatgt cgaatatgaa gcgtgccatc gagcagttcg ctcaggccga gcccgacatt
     5281 ccccggatcc gcgaaggcat ccgcgaatgc cagacctcgg aggacctgcg cgagggcttg
     5341 agcgcgctgc gcgaacgccg ggcgccggct ttcaagggcc gctgagccaa tgtggtagac
     5401 ttagacatca tgcagcgtcg tctcgccgcc atcgtccatg ccgacctcgc cggattcacc
     5461 cgcatgatgg agggagccga aacgcgcact ttccggcatc tgaaatcagc ccagatcgag
     5521 gtctggcggc cggccatcga tgccgccagc ggccggctgg tcggcacggc gggcgacgcc
     5581 atgctggccg agttcggctc ggccgtgacc gcggtgagtg ccgcgatcga catccaggaa
     5641 cgcatggccc gcttcaatga ggcgctggcg gccgagcagc gcatgatgtt ccgcgtcggc
     5701 gtgcatctcg gcgaagtcat cgtcgacgac gaggaccaga acatcttcgg cgacggcgtc
     5761 aatctggccg cccgcatcca ggcgctggcc gaaccgggcg gcatcgccgt gtcgcgcgcc
     5821 gtgcgcgacc tggtcgagct gcgcatcgac tatgccttcg tcgatggcgg cgagcaccag
     5881 gtcaagaacg tgagccgctc cgtccaggtc ttccacgtgc gaccggccaa ggccgccgtc
     5941 accatcggca ccacgacgcg catggtgccg caaatcaccc tgcgcttcga aggcatcgat
     6001 tccggcaaca aaaagcacgc cttcgaggtc gctctcgaca agctgatcag ccgctcgcag
     6061 ggcatggtga tcggccgtgc cgccgaccag tgcgatctcg tggtggcgca cgccaccgtg
     6121 tcacgccgcc acgcccgcct cagcctggcc ggcgaggcgc tgcaggtcga ggatctcggc
     6181 tcgaccaacg gcacggcgat cggcggcaag gcgctcagcg tcggcgcacc ggtggtgctg
     6241 catgccggca acaagttgcg gctgggcgac gtcgagctgt tggtgcgcca gctctaggaa
     6301 catccgtgcc atgaccggaa gcacagacga gccacccgac acggtttctc cgccaacgtc
     6361 gcccgacgtc gaccacgtcg ccctgaaacc cggccagatg atcggtcgct acgagatcgt
     6421 ctcggtgctg ggccagggcg gattcggcat cacctatcgg gcgcgcgaca tacagctcga
     6481 ccgcgaggtc gcgatcaagg aatacctgcc ctcggcgctg gcgtttcgcc aggacggcgt
     6541 caccgtgatg ccgcgcacca ccaagatggc cgacgatttc ggctggggcc gcgagcgctt
     6601 cgtcaccgag ggccgcacct tggccagcct ccatcgcgtg ccggcgatcg tgcgggtctt
     6661 cgacttcctg cagttcaacg gcacagccta catcgtcatg gagctgctgc atggcgagac
     6721 gctcgaggat cgcatcgcca agaacggcaa gctcacggcc gaggaggtcg accgcatcct
     6781 gtggcccctg ctcgacgggc tggagcaggt ccacaacgcc ggcttcctgc atcgcgacat
     6841 caagcccgcc aacatcctgc tcgatgccgc gggcaacccg accctgatcg atttcggcgc
     6901 ctcgcgcgcg gcgatggccg ggcgcagcac gcctctgacc gccatcttca cgccgggcta
     6961 tgccgcggcc gagcagatga cctcggccaa gcagggccca tggacggaca tctatggcgt
     7021 gtcggccacg ctctatcacg cgatcaccgg tcaaaggccg cccagcgctt tcgaccgcat
     7081 gctgaacgac ggctaccagc cgctcgccca gcgcgatccg gcgggcttct cgcccggcgt
     7141 cctggccggc ctcgatgccg gcctcgccgt ggcggcgcgc gagaggccgc agagcatcgc
     7201 cggctggcgg ccgatcctcg ccatgacggc cgcgcccgcg gccgactcca cggtggcgat
     7261 ggacaaggcg cagccggacg ggcggccgga agggaggcac gtcccgaccc tgccgccgcc
     7321 cgccgccgca gcgcccaaac gcagcggcct atggatcgcg gcagccgtcg tgctgctcgc
     7381 cctgctgggc ggcggcggct attacgccat cgcctcgcgc ggacccgatc ccgaaatggt
     7441 caaggcgcgc caggcggccg aggaggcgga agcccgccgg ctcaaggccg agcaggaggc
     7501 cgccaaactg cgcatcgaga acgagcagcg ccagaaggcc gaggagatcg ccgctgcgcg
     7561 caagcggcag gaggaggccg aagcggcggc caagaagcag ttcgaggagg acacgcggca
     7621 caagatcgag gccgagatcg ccgtgcagaa acgcggcgag gaggaggcca agcgcaaggc
     7681 cgaggaggag gccgaggcgc gccgcaaggc gatcgacgat gcccgcaagg cggtcgagtc
     7741 cgtggccggg ccgttcgacc attttggcaa gacgctgatg atgatcgggc ttaaggaccg
     7801 gccggacgag gtccgcctgc agggggtgga tatcgtcaac gacccggcgc tgcacaagct
     7861 cgcggtcgac gccctggccg cccagccgcg ccatctgcgc tgccggcaga ccgaccgcct
     7921 gaccgacggc acgccgcttt accgctgcct ggtcaccccg ctcaatgcca aggaaccgct
     7981 ggccgacatc cccgattccg accggctcga cctcgccctg gccctggtgc gcaccggcct
     8041 gctcctggcc tcctgcgacg ccccccgctc ctatgccgat gccgaggacg atgcccgtgg
     8101 ccgcaagcag tcgctatggg gtagagtaac ggttccagaa tacaaacgga gatgcaccaa
     8161 atgactgcct tgattgccga gacgacgacc ccgcgtacgg tgggccggaa gattgcgatg
     8221 cacgtggtcg gcgtggtggc ggctctcggc ctcgtcacgg cctgcacgac aagtgacagc
     8281 ggcggtccgt caaaccaggc gatggagacc tttgccggcg cggcgctcgg cggca
//
LOCUS       DASWGA010000338         4415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1562043, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000338 DASWGA010000000
VERSION     DASWGA010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4415
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1562043"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..1418
                     /gene="mnmE"
                     /locus_tag="VF991_08185"
     CDS             27..1418
                     /gene="mnmE"
                     /locus_tag="VF991_08185"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEX9556457.1"
                     /translation="MDGPPANATIYALGTPAPSRAHPGAISVIRLSGPRAADALIFLT
                     EPRAFERGRAAREPALPAQRRLALRTVYDPLSGEAIDRGLVAWFEAPRSETGETMAEL
                     HLHGGRAVVGAALEAIRRLGFCRLAEPGEFTRRAFENRKLDLTQAEAIADLVAAETEH
                     QRKLALQQMDGALHRLYEDWRILGLRTLAHLEAAIDFPDEDLPAGIADEVRSGITQLQ
                     AEIADHLDDRRGERLREGLSIAIIGPTNAGKSSLLNLLARRDAAIVSETAGTTRDVIE
                     VHLDLGGWPVVLADTAGLRASSDAIEREGVRRARARAAAADLRLLVLDASGDWKRDKQ
                     ALTQATERWDPAHDIVVVNKVDLAAVEAAGVVPLSAKSGAGLTELLARLERSAGALMQ
                     EGAGAPPLTRARHREALGECHAALGRALEAPEVAMAAEDLRLAMRAIGRITGTVRIDE
                     LLDVIFRDFCIGK"
     gene            1637..4246
                     /gene="ligD"
                     /locus_tag="VF991_08190"
     CDS             1637..4246
                     /gene="ligD"
                     /locus_tag="VF991_08190"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007595744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HEX9556458.1"
                     /translation="MRKDSLAPYRAKRDFSQTEEPSGKAAVAAGKALRFVIQRHDATR
                     LHYDFRLELDGVFKSWAVTKGPSLDPQVKRLAVEVEDHPLDYGDFEGTIPEGQYGGGT
                     VQLWDRGYWLPQGDPHEGLKKGDLKFVLEGERLHGSWVLVRMRWDRDRGKSGDGKRTN
                     WLLIKHRDEAAHEGDDDKLLEDPKSIASGRTLKEIALGTGRAPTPFMTAKKRTAGAVW
                     DSRKKGGGETEAAKSVQPKKVSSMPRFVEPQLCKLVEGAPAGRGWAHEVKFDGYRLQL
                     RVEDGKAVLRTRKGLDWTAKFAAIAKQAKTLPDCLIDGEAVALDRHGVPDFGALQAAL
                     SDGKSDRLILFAFDLLFADGEDLRALPLSERKERLKDLLDGLKGKHPALRYVEHFETS
                     GVAVLESASRMGFEGIISKQLDAPYRSGRVGNWLKTKSRAGHEVVIGGWTSEAKKVSS
                     LLVGVHRGKKLVYVGKVGTGFGEAEIRRLLPKLREVESKTSPFAAGASPPRERNIHWT
                     RPELVAEIEFAGWTGGGNVRQAAFKGLRADKPAEEVEAEEPVKPEKAKMAKPVPKAAA
                     KAAGPAVVMGVSISHPDKPLWPAEKPPVTKLELAQYYEAVGDWMIEHLKGRPCSIVRT
                     PDGIDGQTFFQRHAMPGTSDLLEQVKVSGDKKPYLQIDRVEGLAAVAQLGATELHPWN
                     CQPDVPDLPGRLVFDLDPAPDIGFAEVIKGCLDVRERLEALGLKTFCKTTGGKGLHVV
                     TPLTNDKKSPDWDAAKMFAKEICRRLAADFPDRYVLNMAKKERGGRIFLDYLRNDRTA
                     TAVAPLSPRARAGATVSMPINWSQAKPGLDPKTFTLRTAPALLKKSKPWADYAKSAVA
                     LRAAIERLIKSKS"
     gene            4295..>4415
                     /locus_tag="VF991_08195"
     CDS             4295..>4415
                     /locus_tag="VF991_08195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEX9556459.1"
                     /translation="MRPTWEGHLRLSLVTCPVALYTATERAADVHFNMINPKTN"
BASE COUNT          771 a         1476 c         1534 g          634 t
ORIGIN      
        1 ccgccggcga agcggtcgta gtcgctgtgg acggcccgcc ggcaaacgcg acgatctacg
       61 cgctcggcac gccggcgccg tcgcgcgcgc atcccggcgc gatctcggtc atccgcttga
      121 gcgggcctcg ggcggccgac gcgctgatct tcctgaccga gccgcgcgcc ttcgagcgcg
      181 gccgtgcggc gcgcgaaccg gcgctgcccg cgcaacgccg cctggcgctg cgcaccgtct
      241 acgatcccct gagcggcgag gcgatcgacc gcggcctggt cgcctggttc gaagcgccgc
      301 gcagcgagac cggcgagacc atggccgagc tgcacctgca tggcgggcgc gccgtggtcg
      361 gcgccgccct ggaggcgatc cggcggctgg gcttctgccg gctggccgag cccggcgagt
      421 tcacgcgccg cgccttcgag aaccgcaagc tcgacctcac ccaggccgag gccattgccg
      481 acctggtcgc ggccgaaacc gagcaccagc gcaagcttgc cctgcagcag atggacggcg
      541 cgctccaccg cctctacgag gattggcgca tcttgggcct gcgcacgctg gcccacctcg
      601 aagccgccat cgactttccc gacgaggacc tgccggccgg catcgccgac gaggttcgat
      661 cgggcatcac gcaactgcag gccgagatcg ccgaccatct cgacgaccgg cgcggcgagc
      721 gcctgcgcga gggcctgagc atcgccatca tcggcccaac caacgccggc aagtcgtcgc
      781 tgctcaatct tttggcccgg cgcgacgccg ccatcgtgtc ggaaacggcc ggcacgacgc
      841 gcgacgtgat cgaggtccat ctcgatctcg gcggctggcc ggtagtgttg gccgataccg
      901 cgggcctgcg cgcgtcgtcc gacgcgatcg agcgggaagg cgtgcgccgc gcccgcgcac
      961 gcgccgccgc ggccgacctg cgcctgctgg tgctcgacgc ttcgggcgat tggaaacgcg
     1021 ataagcaggc gctgacgcag gcgacggagc ggtgggatcc cgcgcacgac atcgtcgtgg
     1081 tcaacaaggt cgatctggcg gccgtcgagg cggccggcgt ggtgccgctg tcggcaaaaa
     1141 gcggcgcggg tctaaccgag ttgctggcgc gcctggaacg ctcggccggg gcgctgatgc
     1201 aggaaggcgc cggcgcgcca ccgctcaccc gcgcgcgcca ccgcgaggcg ttgggcgagt
     1261 gccacgcggc gctcggccgc gcgctcgagg cgcccgaggt ggcgatggcc gccgaggacc
     1321 ttcggctggc catgcgggcg atcggccgca tcaccggcac ggtgcggatc gacgagctgt
     1381 tggacgtgat cttccgcgac ttctgtatcg gtaaataagc tgccccaccc tatcggtgag
     1441 agccggccgc gaagaggaac gactcggcgc aggtgtcgtt ctcatcaagc gagcacaaga
     1501 ggagcgcgcg tgatcgcttg ccagttattg agatgttctg cgcctcgtag cgctaccggt
     1561 tgcgccgctg gtggccgggc gaaagaagca taggatctta gaccgggata aagtaatgcg
     1621 cccgccacgg tgagacatgc gcaaggacag cctcgccccc tatcgagcca agcgcgattt
     1681 tagccagacc gaggagccgt cgggcaaagc cgccgtcgcg gcggggaagg cgctgcgttt
     1741 cgtcatccag cgccatgacg ccacgcgcct gcactatgat ttccgcctcg agctcgacgg
     1801 cgtcttcaag tcatgggcgg tgaccaaggg tccgtcgctc gacccgcagg tcaagcgtct
     1861 ggcggtcgag gtcgaggacc atccactcga ctacggcgac ttcgagggca ccatacccga
     1921 aggccagtat ggcggcggca cagtgcaact ctgggaccgc ggctattggc tgccccaagg
     1981 cgatccgcac gaaggactga agaagggcga cctgaagttc gttctcgagg gagagcgact
     2041 ccacgggagc tgggtcttgg tgcgcatgcg ctgggatcgg gatcgtggaa agagtgggga
     2101 cggaaagcgc acgaattggc tgctgatcaa gcatcgcgac gaggccgctc acgagggcga
     2161 cgacgacaag cttttagaag atcccaagtc gatcgcctcg ggccgcaccc tgaaggagat
     2221 cgcgctcggc accggccgcg cgccgacgcc cttcatgacg gccaagaagc gcaccgctgg
     2281 cgcggtatgg gacagcagga agaaaggcgg cggcgagacg gaagctgcca agagcgtgca
     2341 gcccaagaag gtctcgtcga tgccgcgctt cgtcgagccg cagctttgca agctggtcga
     2401 gggcgcgccc gccggacggg gctgggcgca cgaggtcaag ttcgacggtt atcgcctgca
     2461 gctcagggtc gaggacggca aggcggtgct gcgcacccgc aaggggctcg actggacggc
     2521 gaagttcgcc gccatcgcca agcaggccaa gaccctgccg gattgcctga tcgacggcga
     2581 ggccgtcgcc ctcgaccgtc atggcgtgcc ggatttcggc gccctgcagg ccgcgctgtc
     2641 ggacggcaaa tccgaccgcc tgatcttgtt cgctttcgat ctgttgttcg ccgacggcga
     2701 ggacctgcgc gcgctgccgc tcagcgagcg caaggagcgg ctgaaggacc tgctggacgg
     2761 attgaagggc aagcatccgg cgctgcgcta tgtcgagcac ttcgagacct cgggtgttgc
     2821 cgtgctggag tcggcttccc gcatgggctt cgaaggcatc atctccaagc agctcgacgc
     2881 gccttatcga tcgggccgcg tcggaaactg gctcaagacc aagtctcgcg ccggccatga
     2941 ggtggtgatc ggcggttgga ccagcgaagc caagaaggtg agctcgctgt tggtcggcgt
     3001 ccatcgtggc aagaagctgg tctatgtcgg caaggtcggc accggctttg gcgaagcgga
     3061 gattcgcagg ctgctgccca agcttcggga ggtcgaaagc aagaccagcc cgttcgccgc
     3121 cggcgccagc ccgcccaggg aacgcaacat tcattggaca cggcccgaac tggtggccga
     3181 gatcgagttc gccggctgga ccggcggcgg caatgtgcgc caggcggctt tcaagggcct
     3241 gcgcgccgac aagccggccg aggaggtcga ggccgaggaa cccgtcaagc cggagaaggc
     3301 gaagatggcc aaacccgtgc cgaaggcggc cgccaaggcc gccggccctg ccgtcgtgat
     3361 gggggtgtcg atctcccatc ccgacaagcc gttgtggccg gccgaaaagc cgccggtcac
     3421 caagctcgag ctggcgcagt actacgaggc ggtcggcgac tggatgatcg agcacctcaa
     3481 gggccggccc tgttcgatcg tgcgcacgcc cgacggcatc gacgggcaga ccttcttcca
     3541 gcgccacgcc atgcccggca cgtccgacct cctggagcaa gtgaaggtgt cgggcgacaa
     3601 gaagccctac ctgcagatcg accgggtcga aggcctggcg gcggtggccc agctcggcgc
     3661 caccgagctg catccctgga actgccagcc cgacgtgccc gatctgccgg gccggctggt
     3721 gttcgatctc gatccggcgc ccgacatcgg cttcgccgaa gtgatcaagg gctgcctcga
     3781 cgtgcgcgag cggctggagg cgctggggct gaaaaccttc tgcaagacca ccggcggcaa
     3841 gggcctgcat gtcgtgacgc cgctcaccaa cgacaaaaag agtcccgact gggacgccgc
     3901 caagatgttc gccaaggaga tctgccggcg cctggcggcg gattttcccg accggtacgt
     3961 gctcaacatg gcgaagaagg agcgcggcgg acgcatcttc ctcgactacc tgcgcaacga
     4021 ccgcaccgcg acggcggtgg cgccgctgtc gccgcgggcg cgtgcgggcg ccacggtctc
     4081 gatgcccatc aactggtcgc aggcgaagcc gggcctcgac ccgaagacgt tcaccctgcg
     4141 caccgcgccg gcgcttctga agaagagcaa gccgtgggcc gactacgcca agtcggccgt
     4201 ggcgctgcgc gcggccatcg aacgcctgat caaatccaaa tcgtgaggag ctcccatggc
     4261 caaggccaag cacaaggcca accagcacaa ggcgatgaga ccgacctggg agggtcatct
     4321 gcggctctcg ctggtgacct gtccggtggc gctttacacc gccaccgaac gggccgccga
     4381 cgtgcatttc aacatgatca atcccaagac caaca
//
LOCUS       DASWGA010000339         3714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_164397, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000339 DASWGA010000000
VERSION     DASWGA010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164397"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..432)
                     /locus_tag="VF991_08200"
     CDS             complement(<1..432)
                     /locus_tag="VF991_08200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556460.1"
                     /translation="MAIKRRSVLAGGAALFASGGVSAPAILRAQSSSKVNVGHGMAMH
                     GQPKYAADAVTPDYINAKAPKGGNVRLGTQGTYDSLHPFILKGVAAAGIGTLWETLCW
                     HARDEAFTVYGMIAETLEWPDDRSWVAFTLRPQAKWHDGAPI"
     gene            complement(587..1549)
                     /locus_tag="VF991_08205"
     CDS             complement(587..1549)
                     /locus_tag="VF991_08205"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9556461.1"
                     /translation="MAKLTRRAALGGAAAVAVWRPVLAEDRPLRIVLGFPAGAGIDTI
                     TRLIAEKMRLSLNRPVVVENKPGAGGIVANLAVKAAAPDGNTLLMTPLATMVAYPHSY
                     SKLDYDPFKDYVPVAHVAAFPLAFGVGPNVPAKTLSEYVALARQGGSYANFASASVGS
                     LPHFFGILFARTAGIQLTHVPYKGTASVLPALLAGEIAAAVVPISDLGALAQSGKVRI
                     LATSGAKRAPQYPDVPTFKEAGYDIEGAAWYALFAPAGTPKDIVERLASSATDAVHQP
                     DLKQRIEPLGLEATGLGPAELGAILRADYDKWGPVIRASGFTAD"
     gene            1649..2578
                     /locus_tag="VF991_08210"
     CDS             1649..2578
                     /locus_tag="VF991_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:2177..2179,aa:Sec)
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase
                     selenoprotein B family protein"
                     /protein_id="HEX9556462.1"
                     /translation="MADSHHFAPEYDAPIEYMRRTREYYLALGYDNPYRWAHYVDAPF
                     RPLGKPLKASTLVLITTAALYQPDKGDQGPGAPYNAAAKFYTVYSGDTSIDHDTRISH
                     IGYDRKHTTATDSNTWFPLPLMREFAREGRFTLAKRFHGAPTNRSQRVTLETDAPEIL
                     ARCRQDQVDAALLVPTUPVCHQTVSLVARYLERNGIPTMVMGAAKDIVEHAGVPRFLF
                     SDFPLGNSGGRPHEPDTQRFTLDLALKVFESAPGPRTTVQSPLRWAEDGDWKLDYNNL
                     ARMSPQEVAERRAEFDKVKQVALKQRQAVGLSS"
     gene            2655..>3714
                     /locus_tag="VF991_08215"
     CDS             2655..>3714
                     /locus_tag="VF991_08215"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9556463.1"
                     /translation="MTKPFAGVKILDFTRVLAGPYGSYQLALLGADVIKVESRDGDDM
                     RYGNRANDWEKRGLAAPWVSVNAGKRSITLDLKKPKAIEVIKRLVAKSDVVMENFRPG
                     VMDGLGIGYETLRAINPKLIYCAVSGFGQVGPARATAAFDGMIQAMSGLMSITGFPAN
                     GPTRVGFAGADVMSGATAAFAVASALYQRTHTGKGQLVDVAMIDAVMSFLAQQFTEHL
                     MTGRVHGQSANLSVTRKPTGDLYKTKDGWMVLAVMTEPQFQRLMKTVGCEGALADPRF
                     ADWPTRIDNAKALHDIIEEALKKETSATWVERFAKADVPAGRVLGIPETAQLDLMQHR
                     TVLQSVETPHGPIKVIGSG"
BASE COUNT          660 a         1258 c         1202 g          594 t
ORIGIN      
        1 gatcggcgcg ccgtcatgcc acttggcttg cgggcgcagg gtgaaggcga cccacgagcg
       61 atcgtcgggc cattccaagg tctcggcgat catgccgtag accgtgaacg cctcatcgcg
      121 cgcatgccag cacagcgtct cccacagcgt gccgatgccg gccgcggcca cgcctttcag
      181 gatgaaggga tggagcgaat cgtaggtccc ctgagtgccc agccggacgt tgccgccctt
      241 gggcgccttg gcattgatgt agtcgggcgt gacggcatcg gcggcgtatt tgggctggcc
      301 gtgcatggcc atgccgtgcc cgacattgac cttggatgag ctctgcgccc gcaggatcgc
      361 cggagccgag acacccccac tggcaaagag ggccgcgccg cccgccagta cgctgcgccg
      421 tttgatcgcc atgcgatgcg ctcccgaagc cagcctgact ttcacttcat atatagcgtg
      481 atcgagttgg gcggcactat ggccggcggg ttacttcgct gtcagcttta tctggcctcc
      541 accacagggc aggcacgtcg ggccggcggg cggggcgcgg cggcgatcaa tccgccgtga
      601 aaccggaagc gcggatgacc ggaccccatt tgtcataatc ggctctgagg atcgcgccca
      661 gttcggcggg tcccaggccg gtcgcctcga ggccgagcgg ctcgatacgt tgcttgagat
      721 cgggctgatg gacagcatcg gtcgcagagc tcgccagccg ctcgacaata tctttcggcg
      781 tgccggctgg tgcgaacagt gcgtaccagg ccgcgccctc gatgtcgtag ccggcctcct
      841 tgaaagtcgg cacgtcggga tactgaggcg cgcgcttggc gcccgaggtc gcgaggatgc
      901 ggaccttgcc ggactgcgcc agcgcgccga ggtcgctgat cggcaccacg gcggcggcta
      961 tctcgcccgc cagcagcgcc ggcagcacgc tggccgtgcc cttatacggc acgtgcgtga
     1021 gctgaatgcc ggccgtgcgc gcgaacagga tgccgaagaa gtgcggcagg ctgccgacag
     1081 acgccgacgc gaaattggcg tagctgccgc cctgcctcgc cagcgcgacg tactcggaca
     1141 gagtcttggc cggcacgttg gggccgacgc cgaaggcgag gggaaacgcc gcgacatgcg
     1201 cgaccggcac atagtccttg aacggatcgt aatcgagctt cgaataggag tgcggatagg
     1261 cgaccatggt ggccagcggc gtcatcagga gcgtgtttcc gtcgggtgct gctgccttca
     1321 ccgccaggtt ggcgacgatg ccgccggccc ctggcttgtt ctcgaccacg accggccgat
     1381 tgagcgacag gcgcatcttc tcggcgatca gccgggtgat cgtgtcgatg cccgctcctg
     1441 cgggaaagcc gaggacgata cgcagcggcc gatcctcggc aagcaccggc cgccatacgg
     1501 cgacagcggc cgcaccgccc aaggcagcgc ggcgggtcag cttggccaaa caggtcctcc
     1561 ccagccttgc gaaaaagcta cggcccggcg gagaaattgt cacccttcgc taaattgact
     1621 tcggagcctg ctcgtcccag tttgggccat ggccgattcg caccatttcg caccggaata
     1681 cgatgcgccg attgagtaca tgcgccgcac gcgcgagtac tacctcgcgc tgggctacga
     1741 caatccttac cgctgggcgc actatgtcga tgccccgttc cggccgctcg gcaagccttt
     1801 gaaggcgagc acgctcgtgc tgatcaccac cgccgcactt taccagccgg acaaaggcga
     1861 ccaggggccg ggcgcgccct acaacgccgc cgccaagttc tacaccgtct attcgggtga
     1921 cacctcaatc gaccacgaca cccgcatctc ccacatcggc tacgaccgca agcacaccac
     1981 ggcgaccgac agcaacactt ggtttccgct gccgctgatg cgcgaattcg cgcgcgaggg
     2041 ccgtttcacg ctggccaagc gcttccatgg cgcgccgacc aaccgcagtc agagggtgac
     2101 gctcgagacg gacgcgccgg agatcctggc gcgttgccgg caggaccagg tcgacgcggc
     2161 gctgctcgtg ccgacttgac ccgtctgtca ccagaccgtg agtctggtcg cccgatatct
     2221 cgaacgaaac ggcatcccga ccatggtcat gggcgcagcc aaggacatcg tcgagcatgc
     2281 cggcgtgccg cgcttcctgt tcagcgactt cccgctcggc aattccggcg gcaggccgca
     2341 cgaacccgac acccagcgct tcaccctcga cctggcgcta aaagtcttcg agagcgcccc
     2401 aggtccgcgc accacggtgc agtcgccgct gcgctgggcc gaggacggcg actggaagct
     2461 cgactacaac aacctcgcgc gcatgagtcc gcaagaagtc gccgagcggc gcgccgagtt
     2521 cgacaaggtg aagcaggtgg cgctgaagca gcgccaagca gtcggcctgt catcctgagc
     2581 gaagcgaagg atctcatggc gattgcaagc ggcgatgagg tccttcgctg cgctcaggac
     2641 gacacaaagc tccgatgacc aagcccttcg ccggcgtaaa gatcctcgat ttcacgcgcg
     2701 tgctggcagg gccctacggc tcctaccagc tcgccctgct cggcgctgac gtcatcaagg
     2761 tcgaatcgcg tgacggcgac gacatgcgct acggcaaccg cgccaacgac tgggagaagc
     2821 gcgggctggc ggcgccgtgg gtctcggtca acgccggcaa gcggtcgatc accctcgatc
     2881 tcaagaagcc caaggcgatc gaggtcatca agcgcctggt cgccaaatca gacgtggtga
     2941 tggagaattt ccgccccggc gtgatggacg ggctcggcat cggctacgag acgctgcgcg
     3001 ccataaatcc caagctgatc tactgcgccg tctcgggctt cggccaggtc gggccggcgc
     3061 gggcgacggc ggcgttcgac ggcatgatcc aggcgatgtc cggcctgatg tcgatcaccg
     3121 gctttccggc caatggcccg acccgcgtgg gcttcgccgg cgccgacgtg atgtcgggcg
     3181 ccacggcggc gttcgctgtt gcctcggcgc tctaccagcg cacccatacc ggcaagggcc
     3241 agctcgtcga cgtcgccatg atcgacgcgg tgatgtcctt tctggcgcag cagttcaccg
     3301 aacacctgat gaccggccga gtccatggcc agagcgccaa cctgtcggtt acccgcaagc
     3361 cgaccggcga tctctacaag accaaggatg gctggatggt gctggccgtt atgaccgagc
     3421 cgcagttcca gcgcctgatg aagacggtcg gctgcgaagg cgccttggcc gatccgcgct
     3481 tcgccgactg gcccacgcgc atcgacaacg ccaaggcgct gcacgacatc atcgaggaag
     3541 ccctcaagaa ggagacctcg gcaacctggg tcgagcgctt cgccaaggcc gacgtgccgg
     3601 ccggtcgggt gctcggtatt cccgagaccg cgcagctcga cctgatgcag catcgcaccg
     3661 tcctgcaatc cgtcgagacc ccgcacggcc cgatcaaggt cataggctcg ggct
//
LOCUS       DASWGA010000340         3013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_45907, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000340 DASWGA010000000
VERSION     DASWGA010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45907"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1154
                     /locus_tag="VF991_08220"
     CDS             159..1154
                     /locus_tag="VF991_08220"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEX9556464.1"
                     /translation="MRDLIDIWVGVQNWIFETVVSPLLFRFGLMEWFEPAFNAVEIVM
                     LGIVQVAVIALGMRFFEKRWPLEKTDNDRLVAVDRVYTVLNKLGVIPLLVFVVSYPVT
                     QEIEHLMRAWGLAPPRVERLVPGLHDNALASFLVYFVLYDFAAYWLHRAQHKFAWWWA
                     LHSLHHSQRQVTVWSDDRNHIVDDLLITLALVIFAQFVGVQPDDYVLILMIGRLVESW
                     SHANVDMSYGRVGERLIVGPRFHRLHHALASPDERHIQDHNFAPVFPIWDMLFGTAIY
                     DGKHRPTGVDDPVVDADNGRGWVAQQVTVFGRFVRALVPRFSRAPVQPGLRPPAE"
     gene            complement(1108..2037)
                     /locus_tag="VF991_08225"
     CDS             complement(1108..2037)
                     /locus_tag="VF991_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019966055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HEX9556465.1"
                     /translation="MSTSPALICLGEPLIEFNRPRDGDGRTWLQGFGGDSQNVAIAAA
                     RQGASAGYLTSLGQDWMGDAFLDLWRSEGVDASRVSRHPSAPTGVSFVTHSDAGHKFD
                     YLRKNSAASLMTPDGLAADYIAGARFFHLSAIGQAISDSARQTCDAAISAARTAGVKI
                     SYDTNLRLRLWDLDTARRTIDATIARCDIALPSLDDSQQLTGLAEADAIADHYLRLGA
                     PLVALKMAAEGCLIATPKERLRLPGHRVDSVDATGAGDTFDGAFLARLLAGDDLKTAA
                     HYANVAAALSTRGYGAVTPIPRAAEVLAELARG"
     gene            2097..>3013
                     /locus_tag="VF991_08230"
     CDS             2097..>3013
                     /locus_tag="VF991_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9556466.1"
                     /translation="MAENEAKPVGPDLTQGISLTELADGGMLAGHVGEEEVLLARLGK
                     EVFAVGAHCSHYHGPLAEGILVGDTVRCPWHHACFSLRTGEALRAPALSAVDCWSVEQ
                     RDGKVFVKDKRSEKPAPRYRPAAAPDRIVIVGGGAAGFAAAEMLRREAYRGSIVMLSN
                     DDAAPVDRPNLSKDYLAGTAPEEWIPLRGDDFYSENGIELRLKANVTGIDPRAREVTL
                     GDGGKVAYDRLLLATGAEPVRLPIPGADQPHVHTLRSLADSRAIVERAKTARRAVVIG
                     ASFIGLEVAASLRARGIEVHVVAPEKRPM"
BASE COUNT          471 a          979 c         1056 g          507 t
ORIGIN      
        1 cggtggtcga tctcgagcag atgcggatgg tcgcctcgat cccggtgggc aagtccccgc
       61 acggcgtttt catgctcaag tccgccgcgg cggcaccggg aacagggccg gttcgcgcag
      121 cgtcgacggc gggcgaccag aagtaggcgg gcgcgccggt gcgcgacctc atcgacatct
      181 gggtgggggt ccagaactgg atcttcgaga ccgtggtgag tccgctgctg ttccggttcg
      241 gcctgatgga atggttcgag ccggccttca atgccgtcga gatcgttatg ctggggatcg
      301 tgcaggtcgc cgtcattgcg ctcggcatgc gcttcttcga aaagcgctgg ccgctcgaga
      361 agaccgacaa cgaccggctg gtcgccgtcg accgcgtcta cacggtgttg aacaagctgg
      421 gtgtcattcc gctcctggtg ttcgtggtga gctatcccgt cacccaggag atcgagcatc
      481 tgatgcgcgc ctggggtctt gcgccgcccc gcgtcgaacg gctggtgcca gggctgcacg
      541 acaatgcgct ggcctcgttc ctggtctatt tcgtgctcta cgacttcgcc gcctactggc
      601 tgcaccgcgc ccagcacaag ttcgcctggt ggtgggcgct gcacagcctg caccacagcc
      661 agcgccaggt gacggtgtgg agcgacgacc gcaaccacat cgtcgacgat ctgctgatca
      721 ccttggcgtt ggtgatcttc gcccagttcg tcggcgtgca gcccgatgac tacgtcctga
      781 tcctgatgat cgggcgtctg gttgaaagct ggtcgcacgc caatgtcgac atgagctatg
      841 gccgggtggg cgagcgcctg atcgtcgggc cgcgtttcca tcgcctgcac catgcgctgg
      901 cgagccccga tgagcgccat atccaggacc ataatttcgc gccggtgttc ccgatctggg
      961 acatgctgtt cggcacggcg atctatgacg gcaagcaccg gccgaccggc gtcgacgacc
     1021 ccgtggtcga tgccgacaac ggccgcggct gggtggctca gcaggtgacg gtgttcggcc
     1081 gcttcgtgcg ggcactcgtc ccgcgcttca gccgcgcgcc agttcagcca ggacttcggc
     1141 cgcccgcgga ataggcgtca ccgcgccata gccacgggtc gacagcgctg ccgcgacgtt
     1201 ggcgtagtgg gccgctgtct tgaggtcgtc gccggccagc aggcgcgcca ggaaggcgcc
     1261 gtcgaaggtg tcgccggcgc cggtggcgtc gactgaatcg acgcgatggc ccggcaggcg
     1321 aaggcgctcc tttggcgtcg cgatcaggca gccttcggct gccattttca gggcgaccag
     1381 cggcgcgccg agcctgagat agtggtcggc gatggcatcg gcctcggcaa gcccggtgag
     1441 ttgttgcgaa tcgtcgagac tgggcagcgc gatgtcgcat cgcgcgatgg tggcatcgat
     1501 cgtgcggcgc gccgtgtcga gatcccacag ccgcaggcga agattggtgt cgtatgaaat
     1561 tttaacgccg gccgtgcggg cggccgagat ggcggcgtca caggtctgcc gggcgctgtc
     1621 gctgatcgcc tgcccgatcg ccgacaagtg aaagaaccgg gcaccggcga tgtagtccgc
     1681 cgccaggccg tccggtgtca tcagcgaggc ggcggaattc ttgcgcaggt agtcgaactt
     1741 gtggccggca tcgctgtgcg tgacgaaact gacgccggtc ggcgcgctgg gatggcggct
     1801 cacgcgcgag gcgtcgacgc cctcggagcg ccacaggtcg aggaaggcgt cgcccatcca
     1861 gtcctggcca aggctggtga gatagccggc cgacgcgccc tggcgggctg ccgcgatcgc
     1921 gacgttctgc gaatcgccgc cgaagccctg cagccaggtc cggccatcgc cgtcgcgcgg
     1981 cctgttgaac tcgatgagcg gctcgccgag acagatcaag gcgggggaag tggacatcac
     2041 gcctggggtt tcccatggtg cgggccggcg ctcaactccg atcgaaggag aacgaaatgg
     2101 ccgagaacga agccaagccc gttggccccg acctgaccca aggcatttcc ctcaccgagc
     2161 ttgccgatgg cggcatgctg gccggccatg tcggcgaaga ggaggtgctg ctggcccgcc
     2221 tcggcaagga ggtattcgcg gtgggcgccc actgcagcca ctatcacggt ccgctcgccg
     2281 aaggaatttt ggtcggcgac accgtgcgtt gcccgtggca ccacgcctgc ttcagcctgc
     2341 gcaccggtga agccttgcgt gccccggcct tgagcgcggt cgattgctgg tcggtcgagc
     2401 aacgcgacgg caaggtcttc gtgaaagaca agcgcagcga aaagcccgcg ccgcgctatc
     2461 ggccggccgc ggcgccggac aggatcgtca tcgtcggcgg cggcgccgcg ggcttcgcag
     2521 cggccgagat gctgaggcgc gaggcgtatc gcggcagcat tgtcatgctg agcaacgacg
     2581 atgcagcgcc cgtcgaccgc ccgaaccttt ccaaggacta tctcgccggc accgcgcccg
     2641 aggaatggat tccgctgcgc ggcgacgatt tctattccga gaacggcatc gagcttagac
     2701 tgaaggccaa cgtcaccggc atcgatcccc gcgcgcgcga ggtgacgctc ggcgatggcg
     2761 gcaaggttgc ctacgaccgg ctgctgctgg ccacgggggc ggagcctgtc cgcctgccga
     2821 ttcccggcgc cgaccagccg catgtccaca cgctgcgcag cctggccgac agccgggcga
     2881 tcgtcgagcg cgccaagacg gcgcgccgcg ccgtggtcat cggcgcgagc ttcatcggcc
     2941 tggaggttgc cgcctcgctg cgcgcgcgcg gcatcgaggt ccatgtggtc gcgcccgaga
     3001 aacggccgat gga
//
LOCUS       DASWGA010000341         3664 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_164442, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000341 DASWGA010000000
VERSION     DASWGA010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3664
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164442"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(180..530)
                     /locus_tag="VF991_08235"
     CDS             complement(180..530)
                     /locus_tag="VF991_08235"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HEX9556467.1"
                     /translation="MRRRVVVALLIGSAVGGVARLAAEQPVEIRISAKKFEYHPNKVT
                     AKLGQPLVLVLTSEDRIHGFKMPDFGLRTDIVPGQETRVSLTPDKAGSFSFHCDVFCG
                     DGHEDMEGVLVVEA"
     gene            complement(535..1407)
                     /locus_tag="VF991_08240"
     CDS             complement(535..1407)
                     /locus_tag="VF991_08240"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX9556468.1"
                     /translation="MQHADRRDFLKLAGLAGVTFTAGLFPERQAAAQAGSDFHFVQFS
                     DTHWGYSGPANPDAEHTLEKAVATVNGLSKQPDFIVFTGDLTHTTDDAKERRARMKRF
                     REIVSALSVKNIRFMPGEHDASLDKGEAFKEFFGATHYTFDHKGVHFIVLDNVSDPGA
                     KLGDEQLAWLAADLKQRKTDDRIVVLTHRPLFDLKPDWDWTTADGAKAIELLMPYQNV
                     VVLYGHIHQENHHMTGHIAHHAAKSLIFPLPAPGSQPKRTPLPYDAAMPGLGTRDVAV
                     AEKVSLVELPVTKG"
     gene            1521..2072
                     /locus_tag="VF991_08245"
     CDS             1521..2072
                     /locus_tag="VF991_08245"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9556469.1"
                     /translation="MSDAPKPDGVTVERFRVVVLPHLDAAYGFARWLTRDPVAAQDLA
                     QEAMLRALRYFHAFRGDDARPWLLRIVRNTWSDFRTRNGTAGQTLDEIENRPADGPDP
                     EQSAIAGDRQRQIAAALAALPAEAREVLVLREIEDLSYKRIATVLDLPIGTVMSRLAR
                     AREKLAAELGGRLGRRGDGLPDL"
     gene            2053..2799
                     /locus_tag="VF991_08250"
     CDS             2053..2799
                     /locus_tag="VF991_08250"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEX9556470.1"
                     /translation="MDCPTCEAMVDAYVDGELTAIESAAFEQALELCPGCRRRLADAR
                     AVSDALRALPAEPAPDLLRARVERELRAIAGRPTQRIRWSAMAASLIVAIGIGWLGGS
                     LLGHGTRETDELIAGYIRVAMSDHGVEVASSDRHTVKPWFTGRIDYSPPVHDLTAEGF
                     PLLGGRVDLVDGRKVAVLVYRRNQHRLALTLWPSSSAGNATPSLAQRDGFALADWRHG
                     GFEMHAVADLAPSEMKSFAAAVDQAIDADR"
     gene            complement(2804..>3664)
                     /gene="leuB"
                     /locus_tag="VF991_08255"
     CDS             complement(2804..>3664)
                     /gene="leuB"
                     /locus_tag="VF991_08255"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013950231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEX9556471.1"
                     /translation="KKPERGLLRLRKEMDLFANLRPAKVFDALIDASSLKPEIVKGLD
                     IMIIRELTGGVYFGEPRGVSTLPNGEREAIDTQRYKTSEIRRVCAVAFELARKRQNRV
                     CSSDKANVMHTGVLWREEATKLHKEKYSDVALSHMYADALAMQLLRSPGQFDVIVTDN
                     LFGDILSDEASMLTGSLGMLPSASLGAPDATGRRKALYEPIHGSAPDIAGKGLANPLA
                     ETLSYAMMLRYSFDLGKEADLVEKAVENVLAAGYRTADLLAGGKAAGLKKVGTQEMGD
                     AIVKELDRLA"
BASE COUNT          565 a         1171 c         1280 g          648 t
ORIGIN      
        1 gccggcatag cgattcgatc ggcacgacga tcgccaagac cgccgcccgc accgtgacca
       61 acgtcgcggt gcgcgaggtc accaaagcgg tgctgggcgg cggtcgccgc ggcagcagcg
      121 ggggactgct gggcggcatc ctgcgcggtg tcctgggttc gctcaggaaa tagcgcgctt
      181 caggcttcga cgacgaggac cccttccatg tcctcatggc catcgccaca gaagacgtcg
      241 cagtggaacg agaagctgcc cgccttgtcg ggcgtcaagc tgacgcgcgt ctcctggccc
      301 ggcacgatat cggtgcgcaa gccgaagtcg ggcatcttga agccatggat gcggtcttcc
      361 gaggtcaaga ccagcaccag cggctggccg agcttggccg ttaccttgtt tgggtgatac
      421 tcgaacttct tggcgctgat gcgaatctcg accggctgct cggcggcaag gcgcgcaacc
      481 ccgcctaccg cgctgccgat cagcagcgcg acgacaactc tgcgacgcat gggatcagcc
      541 tttggtgacc ggcagctcga ccaggctgac tttctccgcc accgccacgt cgcgcgtgcc
      601 gagacccggc atggcggcat cgtagggcaa cggcgtgcgc ttgggctgcg agcccggcgc
      661 gggcaaggga aagatcagcg acttggcggc atgatgggcg atgtggcccg tcatgtggtg
      721 gttctcctga tggatgtggc cgtagagcac cacgacgttc tgatagggca tcaagagctc
      781 gatggccttg gcaccgtcgg cggtcgtcca gtcccagtcc ggtttcaggt cgaacagcgg
      841 ccggtgcgtc agcacgacga tgcggtcgtc ggtcttgcgc tgcttgaggt cggcggccag
      901 ccaggcgagc tgttcgtcgc ccagcttggc gcccgggtcg gagacgttgt cgagaacgat
      961 gaaatgcacg cccttgtggt cgaacgtgta gtgggttgcg ccgaagaact ccttgaaggc
     1021 ctcgcccttg tcgagcgagg cgtcgtgctc gcccggcatg aagcggatat tcttcacgct
     1081 caacgcagag acgatctcgc ggaagcgctt catgcgggcg cgccgctcct tggcgtcgtc
     1141 ggtcgtgtgg gtgagatcgc cggtgaagac gatgaagtcg ggctgcttgg agaggccgtt
     1201 cacggtcgcc acggcctttt ccagcgtgtg ttcggcgtcg ggattggctg ggccgctata
     1261 gccccagtgc gtgtcggaga attgcacgaa gtggaaatcg gacccggctt gcgccgcggc
     1321 ctgccgttcc gggaagagcc cggcggtgaa ggtgacaccg gccagaccgg ccagcttcag
     1381 gaaatcgcga cgatcggcgt gctgcatggg agccctcctc gggaactgac ggcactaccg
     1441 ggccctgcgc ggttttattc cgtcgttgcg actccggaat aaattcgacg gtcggcgggt
     1501 attgttgtcc tatggacggc atgtccgatg cgccgaagcc tgacggtgtt acggtcgagc
     1561 ggtttcgcgt cgtcgtgctg ccgcatctcg acgccgccta cggcttcgcg cgctggctga
     1621 cgcgcgatcc ggtggcggcc caggatctgg cgcaggaggc gatgctgcgc gcgttgcgct
     1681 acttccacgc ctttcgcggc gatgacgcgc ggccttggct gctgcgcatc gtgcgcaata
     1741 catggagcga cttcaggacc cgcaacggca cggcaggcca gacgctcgac gagatcgaga
     1801 accggccggc cgacggtccg gatcccgagc aaagcgcgat cgccggcgac cggcagcggc
     1861 aaatcgcggc cgcgctcgcg gccctgccgg ccgaggcgcg tgaggtgctg gtgctgcgcg
     1921 agatcgagga tctttcgtac aagcgcattg cgacggtgct cgatctgccg atcggcacgg
     1981 tcatgtcgcg cctggcgcgg gcgcgggaaa agctggcggc cgaacttggc ggccgactgg
     2041 gaaggagggg cgatggactg cccgacttgt gaggcgatgg tcgacgccta tgtcgacggc
     2101 gagctcacgg cgatcgaaag tgccgcgttc gagcaggccc tcgagctctg cccgggctgc
     2161 cggcggcggc ttgcggacgc acgggcggtg agcgacgcct tgcgcgcgct gccggccgag
     2221 cctgcgcccg acctgttgcg ggcgcgcgtc gagcgcgagc tgcgcgccat tgccggccgg
     2281 ccaacacaac gcattcgctg gtcggcgatg gcggcgagcc tgatcgtggc aatcggcatc
     2341 ggctggctgg gaggcagcct gctcggccac ggcacccgcg agaccgatga gctgattgcg
     2401 ggctacattc gcgtcgccat gagcgatcat ggcgtcgagg tcgcttcctc cgaccgccat
     2461 accgtcaagc cgtggttcac cggccgcatc gactattcgc cgccggtcca cgatctcacc
     2521 gccgagggat tcccgctgct cggcggccgg gtcgacctcg tcgatggccg caaggtggcg
     2581 gtgctcgtct accgccgcaa tcagcaccgg ttggctttga ccttgtggcc ttcatcgtcg
     2641 gcgggcaacg ccaccccgag cctcgcgcaa cgcgacggtt ttgcattggc cgactggcgg
     2701 cacggcggct tcgagatgca cgccgtggcc gatcttgcgc ccagcgagat gaagtcgttc
     2761 gcggcggccg tcgaccaggc gatcgatgcg gatcgctgat cgatcaggcg agccggtcga
     2821 gttccttgac gatggcgtca cccatttcct gggtgccgac tttcttgaga ccggcggcct
     2881 tgccgccggc cagcaggtcg gccgtgcggt aacccgccgc caacacgttc tcgacggcct
     2941 tctcgaccag gtcggcttcc ttgccgagat cgaatgaata gcgaagcatc atggcgtagc
     3001 tgagcgtctc ggccagtgga ttggccaggc ccttgccggc gatgtcggga gcgctgccat
     3061 ggatcggctc gtagagcgcc ttgcgccgcc cggtggcgtc gggcgcgccg agcgaggccg
     3121 agggcagcat gccgagcgag ccggtcagca tcgaggcctc gtccgacagg atgtcgccga
     3181 acagattgtc ggtcacgatc acgtcgaact ggccgggcga acgcagcagc tgcatggcca
     3241 gcgcatcggc gtacatgtgg ctgagcgcca cgtcggaata cttctccttg tgcagcttgg
     3301 tcgcctcctc gcgccacagc acgccggtat gcatgacgtt ggccttgtcc gacgagcaga
     3361 ccctgttctg gcgcttgcgc gccaactcga aggcgacagc gcagacgcgg cggatttcgc
     3421 tggtcttgta gcgctgggtg tcgatcgcct cgcgctcgcc gttgggcagg gtgctcaccc
     3481 cgcgcggctc gccgaaatag acgccgcccg tcagctcgcg gatgatcatg atgtcgaggc
     3541 ccttgacgat ctcgggcttg agcgagctcg catcgatcag cgcgtcgaac accttggccg
     3601 gacgcaggtt ggcgaacagg tccatttcct tgcgcaggcg cagcagtccg cgctcgggct
     3661 tctt
//
LOCUS       DASWGA010000342         2589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_164506, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000342 DASWGA010000000
VERSION     DASWGA010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2589
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164506"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..654)
                     /locus_tag="VF991_08260"
     CDS             complement(<1..654)
                     /locus_tag="VF991_08260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9556472.1"
                     /translation="MTAAQAPAAAASASTASANGTTFAVILSLSFCHLLNDMMQSLVP
                     ALYPILKDSYALSFGQVGMITLAFQCTASMLQPVVGLYTDRKAQPYSLMVGMGFTLIG
                     LLLMSRADSYPSILLAAALIGMGSSVFHPEASRVARMAAGGRYGLAQSLFQVGGNMGS
                     AAGPLLAAFIVVPRGQHSIVWFSGAALIAMTVLFQVGGWYGRRRAMQKPAARGKAAST
                     "
     gene            954..2396
                     /locus_tag="VF991_08265"
     CDS             954..2396
                     /locus_tag="VF991_08265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9556473.1"
                     /translation="MDSNQPTLTNVPARLDRLPWSAFHRLVVVALGITWILDGLEVTL
                     AGSVAAALQTSPRLHLSAEQVGLTGSAYLAGAVLGSLFFGHLTDRLGRKKLFNVTLGV
                     YLVATAATAFSWDFYSFLLFRFLTGAGIGGEYSAINSAIQELIPARLRGRTDLAINGS
                     FWVGAAGGALLSVWLLDPNVLGPDLGWRVAFGSGAVLGLVILYLRRFLPESPRWLMLH
                     GRPGDAARVVDEIEARVVAGAQVTLPPVAATLALGATHKVTLVSVARTLLRLYPGRTT
                     LGLVLMSSQAFVYNAIFFTYALVLTRFYGVEADRVGVYILPFAVGNFLGPLLLGPLFD
                     SIGRKTMIFATYGLSGLLLAVTAQLFNMGLLDATTQTVMWSVVFFFASAAASAAYLTV
                     GECFPLEIRALTIALFYAFGTLLGGVGGPWLFGVLIASESPHEIVFGYMLGAALMIAA
                     ALVTLKLGVNAECRPLEEVAPPLSEHRPGG"
BASE COUNT          397 a          875 c          854 g          463 t
ORIGIN      
        1 ggttgacgcc gccttgccgc gcgcggccgg cttctgcatc gcgcggcggc ggccatacca
       61 gccgccgacc tggaacagca ccgtcatggc gatcagggcg gcgccggaga accacacgat
      121 gctgtgctgg ccgcgcggca ccacgatgaa ggcggcgagc agcgggcccg ccgccgaacc
      181 catgttgccg ccgacctgga acagcgattg ggcgaggccg tagcggccgc ccgccgccat
      241 gcgcgccacg cgcgaggctt cgggatggaa caccgaggat cccatgccga tcagcgccgc
      301 ggcgagcagg atcgacgggt aggaatcggc gcgcgacatc agcagcaggc cgatcagggt
      361 gaagcccatg ccgaccatca gtgaataggg ctgcgccttc ctgtcggtgt agaggccgac
      421 caccggctgc agcatcgacg cggtgcactg gaaggccagc gtgatcatgc cgacctggcc
      481 aaagctcagg gcgtatgaat ctttcaggat gggatagagc gccggcacca gcgactgcat
      541 catgtcgttc agcagatgac agaagctcag cgagaggatg accgcgaagg tcgtgccgtt
      601 ggcgcttgcc gtcgatgccg aagctgccgc ggcgggtgcc tgggccgccg tcattgtgtt
      661 atcagacatg acaggaccat agcagccggc cggcaacaga ccagcgccgc cgcggcaagc
      721 cagcgttgca gtggcgggaa cgagcctcca ctgtcatcct gagcgaatgg gcgcattcga
      781 atgcgccgag aaggatctca tgccggttgc aagcggcgat gaggtccctt cggctatact
      841 cagggcaggc cttcgcttca gggcggagga tactccgccc gagacgacag ttggcgcccg
      901 ttctttccgc cggaacatcc gacattccca ccgcgttctc gtagccatat ccgatggatt
      961 ccaaccaacc tacgctcacc aatgtgccgg cgcgcctcga ccggctgccg tggagcgcct
     1021 tccacaggct ggtcgtggtg gcgctcggca tcacctggat cctcgacggc ctggaagtca
     1081 ccctggcggg ctcggtggcc gccgccctgc agaccagccc gcgcctgcat ctgagcgccg
     1141 agcaggtcgg cctcacgggc agcgcctatc tcgccggcgc cgtgctgggc tcgctgttct
     1201 tcggccatct gaccgaccgg ctcggccgca agaagctctt caacgtcacc ctgggcgtct
     1261 atctcgtggc caccgccgcg accgctttct cctgggactt ctacagtttc ctgctgttcc
     1321 gcttcctcac cggcgccggc atcggtggcg aatactcggc catcaactcg gcgatccagg
     1381 aactgattcc ggcgcgcctg cgcggccgca ccgatcttgc catcaacggc agcttctggg
     1441 tcggcgcggc gggcggcgcg ctgctttcgg tgtggctgct cgaccccaac gtgctcgggc
     1501 ccgacctggg ttggcgggtg gccttcggca gcggcgcggt gctcgggctg gtgatcctct
     1561 atctccggcg cttcctgccc gagagtccgc gctggctgat gctccatggt cggccaggtg
     1621 acgcggcaag ggtggtcgac gagatcgagg cgcgggtcgt ggccggcgcg caagtgacct
     1681 tgccgccggt ggccgcgact ctcgccttgg gcgcgacgca caaggtgacg ctggtctcgg
     1741 tcgcgcgcac gttgctgcgt ctctatcccg gtcgcaccac gctcggcctg gtgctgatgt
     1801 cctcgcaggc cttcgtctac aacgccatct tcttcaccta cgcgctggtg ctgacgcgct
     1861 tctatggcgt cgaggccgac agggtcgggg tctacatctt gccctttgcc gtgggcaact
     1921 tcctgggacc gctgctgctc ggcccgttgt tcgattcgat cggccgcaag accatgatct
     1981 tcgccactta tggcctgtcc ggcctgctgc tggcggtaac ggcgcagctc ttcaacatgg
     2041 gcctgctcga cgccacgacc cagacggtga tgtggagcgt ggtgttcttc tttgcctcgg
     2101 cggcggccag tgccgcctat ctgacggtgg gcgaatgctt cccgctggaa atccgcgcgc
     2161 tcaccatcgc gctcttctat gccttcggca ccctgctggg cggcgtcggc gggccgtggc
     2221 tgttcggcgt gttgatcgcc agcgaaagcc ctcacgagat cgtcttcggc tatatgctgg
     2281 gcgcggcgct gatgattgcc gccgccctgg tcacgctaaa actcggcgtc aacgccgagt
     2341 gccggccgct cgaggaagtg gcgccgccgc tgtcggaaca ccgccccggc ggctgacggc
     2401 cgttccggtt ctgcaacgcg ggcgcgtgcc gggggtgccg acgctcgaca tcgtcgattt
     2461 tcccggagca tacgggccga tctccaccga ggtcggccca gaaatcagtg acaaacacca
     2521 caaaggccgg tggcgctttg cgctagagca tcatccacac ggattgaatc gaaggggatt
     2581 cccctcgaa
//
LOCUS       DASWGA010000343         3782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1686207, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000343 DASWGA010000000
VERSION     DASWGA010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3782
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1686207"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..431)
                     /locus_tag="VF991_08270"
     CDS             complement(207..431)
                     /locus_tag="VF991_08270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556474.1"
                     /translation="MKKPAAITPLLTIPFAIPAYWTPEQALAVFEFLDDLRDAIAARY
                     ATQLCDAARELYQYQATQPDQPGRDDDPLF"
     gene            complement(428..1192)
                     /gene="istB"
                     /locus_tag="VF991_08275"
     CDS             complement(428..1192)
                     /gene="istB"
                     /locus_tag="VF991_08275"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX9556475.1"
                     /translation="MNNLDALKPRAQALRLHGLIVHWPEATADAKAAAWVAALIDWEE
                     QERARRSLERRLKDAHIGRFKPLCDFDWTWPKRCERAAVEALMSLDFLTDATNAVLVG
                     PNGVGKSTIARNIAHQAIVHGHTVLFTSAGNLLGDLAALDSDSALRRRLRHYAAPRLL
                     VIDEVGYLSYSNRHADLLFELISRRYEHKSTLVTTNRPFAEWREVFPNAACVVSLVDR
                     LLHNAEILAIDGESYRLKEARERSDQRARQRRGAKP"
     gene            complement(1185..2744)
                     /gene="istA"
                     /locus_tag="VF991_08280"
     CDS             complement(1185..2744)
                     /gene="istA"
                     /locus_tag="VF991_08280"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX9556476.1"
                     /translation="MGSCAVAEPLVPLRTATEEDLAVAIPPELEAQILRYYHVEKWRV
                     GTIARQLGVHHGTVARVLTQAGLPALGRPVRPSRIDPYLPFIREILERFPTLAASRLY
                     VMAHERGYRGSPDHFRHLIAGLRPRRKAEAYLRLRTLPGEQAQVDWGHFGHLAIGRAR
                     RPLMAFVMVLSYSRQIFLRFFLDARMGSFLHGHAAAFMAWKGVPRVVLYDNLKSAVLE
                     RQGDAIRFHPTLLDFAGHYRYEPRPVAVARGNEKGRVERAIRYVRDNFFAARAVTDLD
                     NLNAQAEAWCHGIAADRRCPGQDARSVRETFADEAPRLLALPENPYPLVERVDVKAGK
                     TPYVRFDLNDYSIPHTHVQRLLTVLAEPDEVRIVDGLHVIACHRRSYDKGAQLENAAH
                     VAALVEHKRAARHHRGTDRLAQAAPASQILLRRAAERGDNLGTITAALLRLLDRYGAR
                     ELEAAIADALERNVPHPNAVRLALERRREQRSEAPPVAASLPAHLQARDAPMRPHRLE
                     PYDQLKEPRDE"
     gene            complement(3602..>3782)
                     /locus_tag="VF991_08285"
     CDS             complement(3602..>3782)
                     /locus_tag="VF991_08285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556477.1"
                     /translation="ICLEPNGLVIVLGMIPIGIGVGLTFPTLMAVGTSGLPPSSFATG
                     VNGGQNPRKSGGRVG"
BASE COUNT          617 a         1138 c         1434 g          593 t
ORIGIN      
        1 tggagccacg agacgatcac gctgcaggga ctgccgctga tggtcaaggc ggcgcacatg
       61 aggctgtcgc acagccggat gccgtttgtg cgcacctact tccgggagac gcaggtgtta
      121 ccggcggcga gaagctgcgt aaaaatggcg gagagtgttg gcgatagaga aggccggttc
      181 gggggcgggc ccgtcggtgg ggtggatcag aacagcgggt catcgtcgcg gccgggttgg
      241 tcgggttgag tggcttgata ttggtacagc tcacgcgcgg cgtcacagag ctgggtggcg
      301 taacgggcgg cgatggcgtc gcggaggtca tcgaggaact cgaagacggc aagcgcttgc
      361 tcgggggtcc agtaagcggg aatggcgaag gggatggtga ggagcggagt gatcgcggct
      421 ggctttttca tggcttggct ccgcggcgtt ggcgtgcgcg ctggtcggat cgctcgcggg
      481 cttccttgag ccggtaagat tcgccgtcga tggcgaggat ctcggcgttg tggaggaggc
      541 ggtcgacgag ggagacgaca caggcggcgt ttgggaagac ctcgcgccat tcggcgaagg
      601 gtcggttggt ggtgacgagg gtgctcttgt gctcgtagcg gcgcgagatg agctcgaaga
      661 gcagatcggc atggcgattg gaataggaga ggtatccgac ctcgtcgatg accaggaggc
      721 gcggggcggc atagtggcgc agccggcggc ggagcgcgga atcgctgtcg agggcggcga
      781 gatcgccgag gaggttgccg gcgctggtga agagcacggt atgaccgtgg acgatcgcct
      841 gatgggcgat attgcgagcg atggtggact tgccgacgcc gttgggtccg acgagcacgg
      901 cgttggttgc gtcggtgagg aagtcgaggg acatcagcgc ctcgacggcg gcgcgctcgc
      961 agcgcttggg ccaggtccag tcgaagtcgc agagcggctt gaagcggccg atgtgagcgt
     1021 ccttgaggcg gcgctcgagg ctgcgacggg cgcgctcctg ctcctcccag tcgatgagcg
     1081 ccgcaaccca ggcggcggcc ttggcatcgg cggtggcttc gggccagtgg acgatgaggc
     1141 catgcaggcg caacgcctgg gcgcggggct tcaaggcgtc gaggttattc atcgcgcggc
     1201 tccttgagct ggtcataggg ttcgagccgg tgcgggcgca tgggggcatc gcgtgcctgc
     1261 aggtgcgcgg gcaggctggc ggcgacggga ggagcctcgc tgcgctgctc gcggcggcgt
     1321 tcgagcgcca ggcggacggc gttgggatgc ggcacgtttc gctcgagggc gtcggcgatg
     1381 gcggcctcga gctctctggc gccatagcgg tcgagcaggc gcagcagcgc ggcggtgatg
     1441 gtgccgagat tgtcgccgcg ctcggcggcg cgccgcagca agatctggct cgccggcgcc
     1501 gcctgagcga gacggtcggt gccgcggtga tggcgcgcgg cgcgcttgtg ctcgacgagc
     1561 gccgcgacat gggcggcatt ctcgagttgc gcccccttgt catagctgcg gcggtggcag
     1621 gcgatgacat gcaggccgtc gacgatgcgc acctcgtcgg gctcggccag caccgtcagc
     1681 aggcgctgca catgggtgtg ggggatggaa tagtcgttga ggtcgaagcg gacgtagggc
     1741 gtcttgccgg ctttgacgtc gacgcgctcc accagcggat aggggttctc aggcagcgcc
     1801 aggagtcgcg gcgcctcgtc ggcgaaggtc tcgcgaacgc tccgggcgtc ttgcccggga
     1861 cagcgccgat cggcggcgat gccgtgacac caagcctcgg cctgggcatt gaggttgtcg
     1921 agatcggtga cggcgcgggc ggcgaagaag ttgtcgcgga cgtagcggat cgcacgctcg
     1981 acccgaccct tctcgttgcc gcgggcgacg gcgacgggac gaggctcgta gcgataatgg
     2041 ccggcgaagt cgagaagggt cggatggaaa cggatagcgt cgccctggcg ctccagcacg
     2101 gcgctcttga gattgtcgta gagcacgacg cggggcaccc ccttccaggc catgaaggcg
     2161 gcggcgtggc catgcaggaa gctgcccatg cgggcatcga ggaagaagcg caggaagatc
     2221 tggcgcgagt agctcagcac catgacgaag gccatcaagg gccgacgcgc ccggccgatc
     2281 gcgagatggc cgaagtgtcc ccagtcgact tgcgcctgct cgccggggag cgtgcgcagc
     2341 cgcaggtagg cctcggcctt gcggcgcggc cgcagacccg cgatgagatg gcggaagtgg
     2401 tcggggctgc cgcgatagcc gcgctcatgc gccatgacgt agagccggct ggcggcgagc
     2461 gtcgggaatc gctccaggat ctcacggatg aagggcaggt agggatcgat ccgcgagggg
     2521 cgcaccggcc ggcccagggc aggcaggccg gcttgcgtca atactctggc gacagtgccg
     2581 tggtggacgc caagctggcg ggcgatggtg ccgacccgcc acttctccac gtgatagtag
     2641 cgtaggatct gtgcttcgag ctcagggggg atggccacgg caagatcctc ctcggtcgcg
     2701 gtgcgcaatg gcacgagggg ctcggcgacg gcgcaggaac ccacggcgaa cctgctccgg
     2761 gcaacgccgt gcgcaccagt gacagtgcca cgccgccaac cgtgaagcgc tgcccggaga
     2821 gcctggtccg gtcgccgtcg ccgagcccgc caatagcaaa tcatcgggcg gcagcggcgg
     2881 ggaaccctga tgcgtcacgt tctttcgtcg gacgcggtag cgacgggcac gctcggcatg
     2941 ggcgaagcga ccgtgatagc tcttctggta gcgctgaccg gcctctcgcc gggagaggcg
     3001 tcgagcttcc cccgcacagc cgccagcgca gtagatctgg ccgcgatcgc agcggctgca
     3061 gaccaccacc cggacgcggc aacgggcaca caggaagagc cggccgggcg ttcccgttgc
     3121 accctcggcg cagccgccaa ggcgtggacg acagcgccga tcggtggaat attcccccgg
     3181 cattcgtgcc ccggcacggt gtgaggcacg gtgccgatgc aaaacttgcc ggttaggatc
     3241 ggcgccgtgc ctgctctcta cggttggccg gtcttaccac gtcaccgacg gagcgccgtc
     3301 accaggctta cgacgatcgc acgccgcatc aggtcggcga ggccgaatgc cggtggatat
     3361 gtggacgatc ggcttcgccg accggctgcg cctcccccgc ttcccgagcc cgctcggaaa
     3421 gcggggaagt gctcgccttc gcccacatcc ccaccggcac cacaaccaca gtacgccttg
     3481 atcatgatga ttcaggaagt agccctgcgc catgcgaccg tcggcctgcg cgatcggacg
     3541 ccatcagttc gcggcacggg cctccgttag gaagccggct cggctgtatc aggttcgcgg
     3601 tctaccccac tctgccgcca gatttgcgcg ggttttgacc gccattcaca cccgtcgcaa
     3661 acgatgacgg cggcagtcct gacgtgccga cggccatgag cgtcggaaac gtcagcccca
     3721 cgccgatacc aatcgggatc atcccgagca cgatcaccag gccgttcggt tccaggcaga
     3781 tc
//
LOCUS       DASWGA010000344         2055 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_669670, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000344 DASWGA010000000
VERSION     DASWGA010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_669670"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..566
                     /locus_tag="VF991_08290"
     CDS             <1..566
                     /locus_tag="VF991_08290"
                     /inference="COORDINATES: protein motif:HMM:NF013094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEX9556478.1"
                     /translation="LSNLQRQVIHRTADIGVAKVSSARRALLDINPEVEVIAHDERLT
                     ADNAERIVGGYDIVADGSDNFATRYLLNDVCYRLKKILVSAAILRFDGQISTYKAWQG
                     AGHPCLRCIFPAAPSEDAVPSCAQAGVLGALAGTLGALQASEVVKEILGIGRSLSGRL
                     LMYDALAASFDEMAIAKRADCPTCGKS"
     gene            563..955
                     /locus_tag="VF991_08295"
     CDS             563..955
                     /locus_tag="VF991_08295"
                     /inference="COORDINATES: protein motif:HMM:NF014672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE family protein"
                     /protein_id="HEX9556479.1"
                     /translation="MTSNDGGVSVIVRAGDYESVHYALALAAAALAVNKPAVLFFTMA
                     GIRALMEPPILDDWERDALNRARGVGDFETLLQACVELGARFIVCEMGLRSLAIDRAG
                     LRADVPFTVAGIVTLLEETKPGMHLVSL"
     gene            974..1948
                     /locus_tag="VF991_08300"
     CDS             974..1948
                     /locus_tag="VF991_08300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HEX9556480.1"
                     /translation="MTSAFDVLGIGNAIVDVISRADEAFLGQHGLVKGSMMLIDEARA
                     ETLYAAMGPGIEVSGGSCGNTMAGIASFGGKGAYIGKVRDDQLGAVFGHDLKATGVSF
                     ETERANAGPATARCLILVTPDAQRTMNTYLGACTGLGPADIDTGRVGAAQVTYVEGYL
                     WDAPAAKQAVLKAFDAAHAAGRLVSITLSDSFCVDRYRDEFRDLLRNKVDILFGNESE
                     IKSLYQVETFEAAMVAARQEAKIAVLTRSERGSVVLKGAETWPVPAAPVAKVVDTTGA
                     GDLYAAGFLFGYTHGKPLAECARLGGLAAAEIISHVGARPEQALRGLI"
BASE COUNT          332 a          704 c          669 g          350 t
ORIGIN      
        1 atctgtccaa cctgcagcgc caggtcatcc atcgcaccgc cgatatcggc gttgccaagg
       61 tttcaagcgc ccgccgcgcg cttttggaca tcaaccccga agtcgaggtg atcgcgcacg
      121 acgagcgtct caccgcggac aatgccgagc gcatcgtggg cggttacgac atcgtggccg
      181 acggcagcga caacttcgcc acacgctacc tgctgaacga cgtctgctat cgcctcaaaa
      241 agattctggt ttccgcggcg atccttcgtt tcgacggcca gatctcgacc tacaaggcct
      301 ggcagggcgc aggccacccc tgcctgcgct gcatctttcc ggccgccccg tcggaggacg
      361 ccgtgccgag ctgcgcccag gcgggcgtct tgggcgcgct ggccggcacg ctgggcgcgc
      421 tgcaggcgag cgaagtggtg aaggagattt taggcatcgg ccgttcgctg tcgggcaggc
      481 ttttgatgta cgacgcactc gccgcctcgt tcgacgagat ggcgatcgcc aagcgggcgg
      541 actgcccgac ctgcggcaaa tcatgacgag caacgacggc ggcgtgtccg tgatcgtgcg
      601 ggccggcgac tacgaaagcg tccactatgc gctggcgttg gccgccgccg cgctggcggt
      661 caacaagccg gccgtgctgt tcttcaccat ggccggcatc cgcgccctga tggagccgcc
      721 gattctcgac gactgggagc gcgacgcgct gaaccgcgcc cgcggcgtcg gcgacttcga
      781 aaccctgctg caggcctgtg tcgagcttgg cgcgcgcttt atcgtgtgcg aaatgggcct
      841 gcgttcactt gccatcgacc gcgcagggct gcgcgccgac gttcccttca cggtcgccgg
      901 catcgtgacc ttgctggaag agaccaagcc cggcatgcac ctggtttcac tgtagatcga
      961 ccgaggagag ttcatgacat ccgccttcga cgtgctgggt atcggcaatg ccatcgtcga
     1021 cgtcatcagc cgcgccgatg aggcctttct cggccagcac ggcctggtga agggcagcat
     1081 gatgctgatc gacgaggcgc gcgccgagac gctgtacgcc gccatggggc cgggcatcga
     1141 ggtctcgggc ggctcgtgcg gcaacaccat ggcgggcatc gcctcgttcg gcggcaaggg
     1201 cgcctatatc ggcaaggtgc gcgacgacca gctcggcgcc gtgttcggcc acgacctcaa
     1261 ggcgaccggc gtgtcgttcg aaaccgagcg cgcgaacgca gggccggcca ccgcgcgctg
     1321 cctgatcctg gtgacacccg acgcgcagcg caccatgaac acctatctcg gcgcctgcac
     1381 cggcctcggc ccggccgaca tcgacaccgg ccgcgtcggc gccgcccagg tgacctatgt
     1441 cgagggctat ctgtgggatg cgccggccgc caagcaggcc gtgttgaagg cgttcgacgc
     1501 cgcccatgcc gcaggccggc tggtctcgat caccctgtcg gattctttct gtgtggatcg
     1561 ctatcgcgac gagttccgcg accttttacg caacaaggtc gacatcctgt tcggcaacga
     1621 atcggagatc aaatcgctct accaggtcga gaccttcgag gcagcgatgg tggccgcccg
     1681 ccaggaggcc aagatcgccg tcctcacgcg cagcgagagg ggctcggtcg tactcaaggg
     1741 cgccgagacc tggccggtgc cggccgcgcc ggtggccaaa gtggttgaca cgaccggcgc
     1801 cggcgacctc tacgccgcag gcttcctgtt cggctacacg cacggcaagc cgctcgccga
     1861 atgcgcacgg ctgggcggcc tcgccgccgc cgagatcatc tcccatgtcg gcgcccgccc
     1921 cgaacaggcg ctgcgcgggc tgatttgagc gctcctttgc cttcgctgac gccctcatgg
     1981 cccccttcat cacggaaggc ttgtcgttct gagcgaagcg aaggacctca tcgccgcttg
     2041 ttaccggcat gagat
//
LOCUS       DASWGA010000345         1695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_292625, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000345 DASWGA010000000
VERSION     DASWGA010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292625"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..604)
                     /locus_tag="VF991_08305"
     CDS             complement(<1..604)
                     /locus_tag="VF991_08305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556481.1"
                     /translation="MLSSIIIGGGPGGLGPLIWAAQEGLLPDWLDRGMVVVERQALLG
                     GTLGRFGIHSDSLGGSYLECLEASGLPPALQPLLHDPVAREMEAYRDSFPPLSLVDRF
                     MRRIGVALAGVLAERSALRLCTEARAVRLRPDGSVAVETIGPDGSEATLLARSAVVAL
                     GGRQFWQQSTLGPGLALADCRSRHLMPSDRALSAKGLAEAN"
     gene            complement(623..>1695)
                     /locus_tag="VF991_08310"
     CDS             complement(623..>1695)
                     /locus_tag="VF991_08310"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX9556482.1"
                     /translation="PHMTRHEFRSVLDAFISGWISSKGPYVQKFEQEFRSFVGVRHGV
                     AVSNGTVALHLALVALGVGPGDEVIVPDLTFAATINAVLYCGATPVIVDVDRLTWCMS
                     LETLKHACTAQTKAIIPVHLYGRPAEIGPIAEFARSRGIAVVEDCAEAHGARYGGRAV
                     GQFGDVSCFSFYANKIVTTGEGGMCLTDSEDLAKSLSVLRDHGMSPDRSYWHERVGYN
                     YRITNLQAAIGQSQLWRVNEVLQRNARIAQLYREALEGIPGVRFPPVLPDEYEPVVWM
                     ACVQVPADKRLPLMRAAHEAKIETRPFFHPLSTLPPYEKYGRVCPNSVELSATGINLP
                     TSRAVDEQIVERVARVFHETLS"
BASE COUNT          287 a          557 c          590 g          261 t
ORIGIN      
        1 ggttggcttc ggcgagccct tttgccgaca aggcccggtc cgatggcatc agatggcggc
       61 tgcgacagtc ggcgagtgcc aggcccggtc ctagcgtgct ttgctgccag aactgccggc
      121 cgcccagggc gaccacggcg gaacgggcca acagtgtggc ttcgcttccg tccggtccga
      181 tggtctcgac cgcgaccgaa ccgtcggggc ggagccgcac cgcacgggcc tcggtgcaaa
      241 gccgcagggc cgagcgttcg gccagcaccc ccgccagcgc caccccgatt cggcgcatga
      301 agcggtcgac cagggatagc ggtggaaagc tgtcgcgata tgcttccatc tcgcgcgcca
      361 cgggatcgtg gaggaggggc tgcagcgccg gcggcaggcc ggatgcttca aggcattcaa
      421 ggtaggatcc gccgagcgag tcggagtgga tgccgaaccg tcccagcgtg ccgccgagaa
      481 gggcctgccg ctcgacgacc accatgccgc ggtcgagcca gtccggcagc aagccctcct
      541 gcgcggccca gatcagtggt cccaagccgc cggggccacc gccgatgatg atggaagaca
      601 acatggcgcg tggccccttc ggtcagctaa gcgtctcgtg gaacacgcgc gcgacgcgct
      661 cgacgatctg ctcgtcgacg gccctcgacg tcggcaggtt tatgccggtc gcggagagct
      721 cgacgctgtt cggacagacg cggccgtact tttcgtacgg cggcagggtc gagagcggat
      781 ggaagaaggg ccgagtctcg atcttggcct cgtgggccgc gcgcatcagc ggcagccgct
      841 tgtcggccgg cacctgcacg caggccatcc acaccacggg ttcgtattcg tcgggcaaga
      901 ccggcggaaa gcgcacgcca gggatgcctt cgagcgcctc acggtagagc tgggcgatgc
      961 gggcattgcg ctgcagtacc tcgttgacgc gccacagctg cgactggccg atcgccgcct
     1021 gcaggttggt gatgcggtag ttgtagccga ccctctcgtg ccagtaggag cggtccggcg
     1081 acatgccgtg gtcgcgcagc acgctcagcg acttggcgag gtcctccgaa tcggtgaggc
     1141 acatgccgcc ttcgcccgta gtgacgatct tgttggcgta gaaggagaaa caggagacgt
     1201 cgccgaattg cccgaccgcg cggccgccgt agcgcgcccc gtgggcttcg gcgcaatcct
     1261 cgaccacagc gatgccgcgg ctcctggcga actcggcgat cggcccgatc tcggccggcc
     1321 ggccgtagag atggacagga atgatcgcct tggtctgtgc cgtgcaggcg tgcttgagcg
     1381 tttccagcga catgcaccag gtcaggcggt cgacatcgac gatcaccggc gtggcgccgc
     1441 aatagagcac cgcgttgatg gtcgccgcaa atgtaaggtc cggcacgatc acctcgtcgc
     1501 ccggcccgac cccaagggcg acaagcgcca ggtgcagggc gacagtaccg ttggacacgg
     1561 cgacgccgtg ccggaccccc acgaagctgc ggaactcttg ctcgaacttc tggacgtagg
     1621 gccccttgct ggagatccag ccggagatga acgcgtccag cacggagcgg aactcatgcc
     1681 gtgtcatgtg gggct
//
LOCUS       DASWGA010000346         1534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2450375, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000346 DASWGA010000000
VERSION     DASWGA010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2450375"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..1011
                     /locus_tag="VF991_08315"
     CDS             76..1011
                     /locus_tag="VF991_08315"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004159.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEX9556483.1"
                     /translation="MTVVFDDWQSTPAAWKGGVVALGNFDGVHRGHQALLGHAAEHAT
                     ALGAPLAVLTFEPHPRRFFVPDTGPFRLTLLAAKVRLLAQYGVQAVLAQRFDTPFAAL
                     SADAFIDDVLLKGLGARHVVCGYDFTFGARRSGNVEQLREQGRQKGFGVTVLDPVMRE
                     GEIYSSTSIREALRAGWASEAAELLGHPWEIEGAVELGDQRGRTIGFPTANVALGEHL
                     RPRFGVYAVRVLVDGQWREAVANLGRRPTFGKLQENFEVHLFDFSGDLYGKTLRVALI
                     DFIRPEMKFAGLDQLKAQIAADGQAARRLLGAQGS"
     gene            complement(1070..1366)
                     /locus_tag="VF991_08320"
     CDS             complement(1070..1366)
                     /locus_tag="VF991_08320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556484.1"
                     /translation="MEGIAGFVGAIGVGFIAGGVAAIVGRTKRRKRATAGDDDAKSKL
                     EKWQTLETVVAPILVVVGLCMLAVKFYADYQAALTPLSPDKALERAVKSLPKSN"
BASE COUNT          251 a          505 c          501 g          277 t
ORIGIN      
        1 gacccagtgc ctgaacggtg acaaggtggt gatcgacggc gaggcgaccg tgctggtgcc
       61 gcggcgcgac gcggcatgac ggttgtcttc gacgattggc agagcacgcc cgcggcgtgg
      121 aagggcggcg tcgtggcgct cggcaatttc gatggcgtgc atcgcggcca ccaggcgctg
      181 ctcgggcacg ccgccgaaca cgccaccgca ctcggcgcgc cgctggccgt gctcaccttc
      241 gagccccatc cacgccgctt cttcgtgccc gacaccggtc cgttccgcct caccctgctg
      301 gctgccaagg ttcgcctgct ggcgcagtac ggcgtgcagg cggtgctggc gcagcgcttc
      361 gatacgccgt tcgccgccct gtcggccgac gccttcatcg acgatgtgct gttgaagggc
      421 ctcggtgcgc gccacgtcgt ctgcggctac gacttcacct tcggcgcccg ccgaagcggc
      481 aatgtcgagc agctgcgcga gcagggcagg caaaagggtt ttggcgtcac cgtgctcgat
      541 ccggtgatgc gcgagggcga gatctattcc tcgaccagca tccgcgaggc attgcgcgcc
      601 ggctgggcga gcgaggcggc cgagctgttg ggccatccct gggagatcga aggcgcggtc
      661 gaattgggcg accagcgcgg ccgcactatc ggctttccga ccgccaacgt ggcgctgggc
      721 gagcatctgc ggccacgctt cggcgtctat gccgtgcgcg tcctggtcga cggccaatgg
      781 cgcgaggcgg tggcgaacct tggccggcgt ccgaccttcg gcaagctgca ggagaatttc
      841 gaggtccatt tgttcgactt ctcgggcgac ctctacggca agacgctgcg cgtggcgctg
      901 atcgacttca tccgtcccga gatgaagttc gccggcctcg accagctgaa agcccagatc
      961 gcggcggacg gccaggcggc gcgacggctg ctgggcgctc aaggaagctg acagcgggta
     1021 gaaccgggct tcgacgcctg cgtcgactac cgcacggccg ggttgtgtcc taatttgact
     1081 tgggaagcga tttgactgcc ctctccaggg ctttatcggg cgaaagaggg gtgagtgccg
     1141 cttgataatc agcgtagaac ttaacggcca acatgcaaag gccgaccaca acgaggatcg
     1201 gcgcaactac tgtttccagt gtttgccatt tctctagctt gctcttggcg tcgtcatcgc
     1261 cagcagtagc gcgcttgcgc ctctttgttc gaccgacaat ggcagcgacg ccgccagcaa
     1321 taaaccctac gcctatggcg cccacgaatc ccgctatccc ttccatgagg ctcccccctt
     1381 gcgttctgcc acaatggccg gatcaaatta gggcgatgta cccgaactcg acattgccgt
     1441 cggcgctggc agtcacctct cgctcctcag gggctgtcgc cctggaaccg gcaagccgcg
     1501 cctgacacag taacggcatg agccgggcca aacg
//
LOCUS       DASWGA010000347         1665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1808380, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000347 DASWGA010000000
VERSION     DASWGA010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1808380"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VF991_08325"
     CDS             <1..355
                     /locus_tag="VF991_08325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX9556485.1"
                     /translation="AFAAQAHGVPMIGILGTVADYSDAAAYKKSAERARRFGFSGGTC
                     VHPGLVQTLNEAFTPSPDDVAYARKLIAADKKAAAEGRGSFSVDGKMIDIPVVDRARR
                     LLKRHDAIERRLNKT"
     gene            complement(373..771)
                     /locus_tag="VF991_08330"
     CDS             complement(373..771)
                     /locus_tag="VF991_08330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556486.1"
                     /translation="MCDYSLELYRSRPAVEEEQYTLHRFPSGTMGFVSGRDCETAVCM
                     PADARLTLAGIGETVQRSFGVGPVEEVVMTRLDVTGHAHRDAVRFANGKEVLLQSLNA
                     GITAEMAAFPSDLTEITGTATRRTPELVDA"
     gene            complement(921..>1665)
                     /locus_tag="VF991_08335"
     CDS             complement(921..>1665)
                     /locus_tag="VF991_08335"
                     /inference="COORDINATES: protein motif:HMM:NF014247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEX9556487.1"
                     /translation="ALTAGAMAIAAESEEHPPHRHWHFAGPFGTFDRAAAQRGYQVYA
                     EVCAACHSLELLYYRNLVDLGLTENQVKSLIKDIQVPDLGDDGQPLERPARLSDPFKK
                     PFPNPAAAAAANNGKAPPDLSLIVKAREGGPDYVHGILTGYVPFDKLTPEQIKEFSVI
                     KDDNFNKYFPGHKIGMPPPLADDKVTYADGTKATLDQEASDVVEFLAWAAEPHMEDRK
                     RTGVRVILFLLAMAGLMYAVKRQVWSDVH"
BASE COUNT          290 a          522 c          548 g          305 t
ORIGIN      
        1 ggcgttcgcc gcccaggcgc atggcgtgcc gatgatcggc atcctgggca cggtggccga
       61 ctactcggat gccgccgcct acaagaagag cgccgaacgg gcgcggcgct tcggtttctc
      121 gggcggcacc tgcgtgcatc ccggcctggt gcagaccttg aacgaggcct tcacgccttc
      181 ccccgatgac gtcgcctacg ccagaaagct gatcgcggcc gataaaaaag ccgcggctga
      241 gggccgcggc tcgttctcgg tcgatggcaa aatgatcgac atcccggtcg tcgaccgcgc
      301 ccgccgcctc ctgaaacggc acgacgcgat cgagcgccgg ctcaacaaaa cctgaacggc
      361 gtcgctcgcc ggttaggcgt cgaccagttc aggcgtgcgc cgcgttgccg tcccggtgat
      421 ctcggtgagg tcggacggga aggccgccat ctcggcggtg atgccggcat tgaggctctg
      481 cagcaggacc tccttgccgt tggcgaaccg caccgcgtcg cgatgcgcat gaccggtcac
      541 atccaggcgt gtcatcacca cttcttcgac ggggccgacg ccgaagctgc gctgcaccgt
      601 ctcgccgatt cccgccagtg tcagacgcgc atcggccggc atgcagaccg cggtctcgca
      661 gtcgcgtccc gaaacgaagc ccatcgtgcc gctggggaag cggtgaaggg tgtattgctc
      721 ttcttcaaca gcaggtcgtg aacgatagag ttccagtgaa taatcacaca tgacgccctc
      781 caggttagtg gacgtccttg tcacgtagta cgagcccggg ggctatcaag taagacgacc
      841 gtgataatcc taaagaatcg gttcgtacgc gttccctatg tctccgactg ggaaaatcgt
      901 gcgttttcga aaaaaacttt tcagtgaacg tccgaccaca cctgccgttt gacggcgtac
      961 atcaggccgg ccatcgccag caggaagaga atgacgcgaa cgccggtacg cttgcggtct
     1021 tccatgtgcg gttcggcggc ccaggccaaa aactccacga cgtcggaggc ttcctggtcg
     1081 agcgtcgcct tggtgccgtc ggcgtaggtc accttgtcgt cggccaaggg cggcggcatg
     1141 ccgatcttgt ggcccgggaa gtacttgttg aagttgtcgt ccttgatgac gctgaactcc
     1201 ttgatctgtt cgggcgtcag cttgtcgaac ggcacgtagc ccgtgaggat gccatggaca
     1261 tagtccggcc cgccctcgcg cgccttgacg atgaggctga ggtcgggcgg cgccttgccg
     1321 ttgttggccg ccgccgccgc agcgggattg gggaagggtt tcttgaaagg atccgacagg
     1381 cgcgccggcc gctcgagcgg ctggccgtcg tcgcccaggt cgggcacctg gatgtccttg
     1441 atcaggctct tgacctggtt ctcggtgagc ccgaggtcca ccaggttgcg atagtacagc
     1501 aactctagcg aatggcaggc ggcgcaaacc tcggcataga cctggtagcc gcgctgggcg
     1561 gcggcgcggt cgaaagtgcc gaacgggccc gcgaagtgcc agtggcgatg cggcggatgc
     1621 tcctcggatt cggcggcgat ggccatggca cccgcggtca gggca
//
LOCUS       DASWGA010000348         1974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_46589, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000348 DASWGA010000000
VERSION     DASWGA010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46589"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..606
                     /locus_tag="VF991_08340"
     CDS             <1..606
                     /locus_tag="VF991_08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEX9556488.1"
                     /translation="QLIVRNVGGGLPGAIDRATLGNPGKYTFCFAEDESDPDWEPLSV
                     RRGIAGGKSAVTLFHGEGVNGFIDQKSRTPEELVRSLAMGLFGVGHPKLCLAGNAVLV
                     LAPEHYKIFKDGGWNRRRIEEALYQALKRPGRDLVRGAEGVPEGLPPSMADQMVDKFQ
                     PDGLLIVRAGGEAGLFSAIIGGWPGQSVRDECQAVTKEIRS"
     gene            603..1124
                     /locus_tag="VF991_08345"
     CDS             603..1124
                     /locus_tag="VF991_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_273701379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:885..887,aa:Sec)
                     /transl_table=11
                     /product="UGSC family (seleno)protein"
                     /protein_id="HEX9556489.1"
                     /translation="MSTVVKLRDPTAETSPVRRARLAPPPSLDGKTVALMDIGKSRGV
                     EFIDRLEGHFKKAGVATKRYRKPTNTKVAPIELMQKMAAEAQLAVIALSDUGSCTSCS
                     LHDLHNLDSRGLPGVNIVTTGFVDGVEAQSESLGFDPAVVYVPHPIQNRTKQEIETIA
                     DQAFAKVMAFLSS"
     gene            1155..1460
                     /locus_tag="VF991_08350"
     CDS             1155..1460
                     /locus_tag="VF991_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEX9556490.1"
                     /translation="MSERRYFVYIMTSSSLSTMYVGVTNDIGRRVFEHRNGRGSEFAK
                     KYRVSRLVYVEEFENPTDAIAREKQLKGWKRIRKNELVRAANPDWADLAPDQSSRAG"
     gene            complement(1581..>1974)
                     /locus_tag="VF991_08355"
     CDS             complement(1581..>1974)
                     /locus_tag="VF991_08355"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556491.1"
                     /translation="AMVTPERIKRTAELQRFPGNREATLQRARSQEPLDPTPLKRLRV
                     PTLILWGAQDRWVPIADAFRLQHDIKGAKLEIFEKLGHNPMEEDPKATAAAVAAFLKP
                     IPPPPAAPPADPLAIDQTVHPAVVPEKD"
BASE COUNT          348 a          636 c          657 g          333 t
ORIGIN      
        1 cagttgatcg tgcgcaatgt cggcggggga ctgcccggcg ccatcgaccg cgccacgctc
       61 ggcaatcccg gcaagtacac tttctgtttc gccgaggacg agtcagatcc cgactgggaa
      121 ccgctgtcgg tgcgccgcgg cattgcgggc ggcaagagcg ccgtcaccct gttccacggc
      181 gagggcgtga acggtttcat cgaccagaag tcgcgcacgc cggaggagct ggtgcgctcg
      241 ctggccatgg gcctgttcgg cgtcggccat cccaagcttt gcctcgccgg caacgcggtg
      301 ctggtgctgg cgcccgagca ctacaagatc ttcaaggacg gcgggtggaa ccgccggcgc
      361 atcgaggagg cgctgtacca ggcgctgaag cggcccggcc gcgacctggt gcgtggcgct
      421 gagggcgtgc ccgagggcct gccgccgtcg atggccgacc agatggtcga caagttccag
      481 cccgacggcc ttctgatcgt tcgcgccggc ggcgaagcag ggctattctc ggccatcatc
      541 ggcggctggc cgggtcaatc cgtgcgcgat gaatgccagg ccgtcaccaa ggagattcgc
      601 tcatgagcac tgttgtgaag ctgcgcgatc ccaccgccga gacctcgccc gtgcggcggg
      661 ctcgtcttgc cccgccgcct tcgctcgacg gcaagaccgt ggcgttgatg gatatcggca
      721 agtcgcgcgg cgtggagttc atcgaccgcc tcgaaggcca tttcaagaaa gcgggcgtcg
      781 cgaccaaacg ctaccgcaaa ccgaccaaca ccaaggtggc gccaatcgag ctgatgcaga
      841 agatggccgc cgaagcccag ctcgcggtga tcgccttaag cgattgaggc tcctgcacat
      901 cgtgcagtct gcacgacctt cataatctcg acagccgcgg cctgcccggc gtcaacatcg
      961 tcaccacggg cttcgtcgac ggcgtcgagg cgcaaagcga atcgctgggc ttcgaccccg
     1021 cggtggtcta cgtgccccat cccatccaga accgcacgaa gcaggagatc gaaaccatcg
     1081 ccgaccaagc cttcgccaag gtgatggcgt ttctgtcgtc ctgagcgaag cgaacgacct
     1141 catcgccgcc agccatgagt gagcgacgtt acttcgtcta catcatgacc agcagctcgc
     1201 tcagcacgat gtatgtcggc gtgacgaacg atatcggacg acgtgtcttc gaacatcgca
     1261 acggcagggg cagcgagttt gcgaagaagt accgagtgag ccgcttggtc tatgtcgagg
     1321 aattcgagaa ccctacggac gccatcgctc gcgagaagca gctcaagggt tggaaacgga
     1381 tccgcaagaa tgaactcgtg cgagctgcta atccagattg ggccgatcta gcccccgatc
     1441 agtcatcgcg cgcggggtaa cccccgcgct gaagcgaagc gaaggatctc atgccatcga
     1501 ggacggagtc ctgcgtcgac ggcgatgaga tccttcgctg cgctcaggat gactgagggc
     1561 tgttccatca tcctccgccc tcaatccttc tccggcacca ccgcgggatg gaccgtctga
     1621 tcgatcgcca gcggatcggc tggcggcgcg gcgggcggcg gcgggatcgg cttcaggaag
     1681 gccgccaccg cggcggcggt ggccttgggg tcctcttcca tcgggttgtg gccgagcttc
     1741 tcgaagatct cgagcttggc gcccttgatg tcgtgctgca gacggaaggc gtcggcgatc
     1801 ggcacccagc ggtcctgggc gccccacagg atcagggtcg gcacacgaag ccgcttgagc
     1861 ggcgtcgggt cgagcggctc ctggctgcgg gcgcgctgca gcgtggcctc gcggttgccg
     1921 gggaagcgct gcagttcggc ggtgcgcttg atgcgctcgg gcgtcaccat cgcc
//
LOCUS       DASWGA010000349         2711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2070848, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000349 DASWGA010000000
VERSION     DASWGA010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2070848"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /locus_tag="VF991_08360"
     CDS             complement(<1..319)
                     /locus_tag="VF991_08360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556492.1"
                     /translation="MNNPHKLAIFIKSLGRGLVVFDGRSGSGKTYLADDMARCLGCTS
                     ADADRDFLDHQRRTFIKALRLDEMRNSLTASLASSPLVMFSTVCARQAVELARVSAAA
                     FIWV"
     gene            complement(472..1503)
                     /locus_tag="VF991_08365"
     CDS             complement(472..1503)
                     /locus_tag="VF991_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase/aspartoacylase
                     family protein"
                     /protein_id="HEX9556493.1"
                     /translation="MSTAPKQTDFTAMSRLSADIDLLADGKATGFVRVPHSVHRSAYG
                     WIPIPIVRIKNGDGPSVLMQAGTHGDEWEGQIGLGNLLRAIEPQHITGRLVILPSANF
                     PAAMAGQRTSPIDDGNLNRLYPGDAEGTITQQIAYWIEHALLPGFDYSFDFHSGGSSL
                     SYIPSALATRHPDPARMQKIVGLLKAFGAPVSYIAAAPQGGGRTFTAASARQGVIALG
                     TELGGGGLVTPGSLKVAEDGMRRVLAHVGLLQGPVPPPSPTRLTEIGGDDYYVYASDG
                     GLFEPLVDLGAEVKTGQPAARIHFHHTPWREPDLLSFKRDGLVLCKRVPARCERGDCL
                     FHLATDIGG"
     gene            complement(1500..2276)
                     /locus_tag="VF991_08370"
     CDS             complement(1500..2276)
                     /locus_tag="VF991_08370"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEX9556494.1"
                     /translation="MSEIEWSRLKASEIKAMAARNAIVIVPIGATEQHGPHLPSMVDW
                     RCVHEVSHRAARLMEKTTPVVVAPTIPYGMSEHHMSLNGTITLDYATMYAVIRCVVTS
                     AVRHGFKRIFVLNGHGGNTTALQNMIGELTVEYKLPFATGTYWDIAAKSIAKLLEKQK
                     ALLHACEAETSMIMAMAPELVNPDELSQMHGPYIPGLAAIPTVNEGVYRWRQLASRSP
                     IGVIGDAGAASAEKGEKLLAAISADVAEALVNERLWSEPI"
     gene            complement(2281..>2711)
                     /locus_tag="VF991_08375"
     CDS             complement(2281..>2711)
                     /locus_tag="VF991_08375"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9556495.1"
                     /translation="TQLAVFGPKSANVKSAAEIGSLKVAAAKGTTQELALSAMNPKAT
                     IMRTEDDATAAAAYLSGQAELFATNSLIIPDLQKRNPAKEFELKFTIRRSPAHMGVRM
                     GEHNLVRWLDSFIFFNMMNGEIERLHQKWLGIPLAPLPSL"
BASE COUNT          454 a          846 c          915 g          496 t
ORIGIN      
        1 cgacccagat gaaagcggcg gctgataccc ttgccaactc gacggcctgg cgagcacaca
       61 cagtggaaaa catgacgagc ggtgaacttg ccagactggc agtgagcgag tttcgcatct
      121 cgtcaagccg cagcgcctta atgaaggtgc gcctctgatg atcaagaaag tcgcggtccg
      181 cgtcggcgct cgtgcatccg agacagcgtg ccatgtcgtc cgcaagatag gttttgcctg
      241 agcccgatcg gccgtcgaag acgaccaacc cgcgcccgag cgacttgata aaaatcgcca
      301 acttgtgcgg attgttcact atgaaatgtc gagctgccat agggaggcac atataaatag
      361 ccgttcttcg tacatgctag cactgcaacg cgatatcggc gctcggcgac gcgttcgacg
      421 atgatccgtc gcatatgctg ggtctagcgc gtcgccccgg cttaattccg tctaacctcc
      481 aatgtctgtc gccaaatgaa acaggcagtc gccgcgctcg cagcgcgccg gcacgcgctt
      541 gcacagcacc aggccgtcgc gcttgaacga caggagatcg ggttcgcgcc acggcgtgtg
      601 gtggaaatgg atgcgcgcgg cgggttggcc ggtcttgacc tcggcgccga ggtcgaccag
      661 cggctcgaac agcccgccat cggaggcgta gacgtaatag tcgtcgccgc cgatctcggt
      721 gaggcgggtc ggcgacggcg gcggcacggg gccctgcagc agcccgacat gggccagcac
      781 gcggcgcatg ccgtcttcgg ccaccttgag cgatcccggc gtcaccagcc cgccgccgcc
      841 cagctcggtg cccagggcga tcacgccctg gcgcgcggac gccgcggtga aggtgcggcc
      901 gccgccttgc ggcgccgccg cgatgtagct caccggcgcg ccgaaggctt ttagcaagcc
      961 gacgatcttc tgcatccgcg ccggatcagg gtgacgcgtt gccagcgcgc tcgggatgta
     1021 gctgagcgag ctgccgccgg aatgaaagtc gaagctgtag tcgaagcccg gcagcagggc
     1081 gtgctcgatc cagtaggcga tctgctgggt gatggtgccc tcggcatcgc ctggatagag
     1141 gcgattgagg ttgccgtcgt cgatcggcga ggtgcgctgg ccggccatgg cggcgggaaa
     1201 gttggccgag gggaggatca ccagccggcc ggtgatgtgc tgcggttcga tcgcgcgtaa
     1261 aaggttgccg aggccgatct ggccttccca ttcgtcgccg tgagtgccgg cctgcatcag
     1321 cacgctgggt ccgtcgccgt tcttgatgcg cacgatgggg atcgggatcc agccataagc
     1381 cgaacggtgc acggaatgcg gcacccgcac gaagccggtc gccttgccgt cggccaaaag
     1441 gtcgatgtcg gccgacaatc ggctcatcgc cgtgaagtcg gtctgctttg gtgcggtact
     1501 caaatcggtt cactccacag gcgctcgttg accaacgctt cggcgacgtc ggccgagatc
     1561 gccgccaaaa gcttttcgcc tttctcggcg ctggcggccc cggcatcgcc gatgacgccg
     1621 atcggcgagc ggctggcaag ctgccgccag cgatagacgc cttcgttgac ggtcgggatg
     1681 gcggcgaggc ccgggatgta gggcccgtgc atctgcgaca gctcgtcggg attcaccagc
     1741 tccggcgcca tcgccatgat catcgaggtc tcggcctcgc aggcgtgcaa cagcgccttc
     1801 tgcttctcca ggagcttggc gatcgatttg gcggcgatgt cccagtaggt gccggtggcg
     1861 aacggcagtt tgtactccac cgtcagctcg ccgatcatgt tctgcagcgc cgtggtgttg
     1921 ccgccatggc cgttcagcac gaagatgcgc ttgaaaccgt ggcgcaccgc cgaggtcacg
     1981 acgcagcgga tcaccgcata catggtggcg tagtcgagcg tgatcgtgcc gttgagcgac
     2041 atgtgatgct cggacatgcc gtaggggatg gtcggcgcca ccactacggg cgtcgtcttc
     2101 tccatgaggc gggcggcgcg atgcgacacc tcgtgcacgc agcgccagtc gaccatgctg
     2161 ggcaaatgcg gcccgtgctg ctcggtggcg ccgatcggca cgatgacgat ggcgttgcgc
     2221 gccgccatcg ccttgatttc cgaggctttc agcctcgacc attcgatctc gctcatcgcc
     2281 ttacagcgaa ggcagcggtg ccagtgggat gcccagccac ttctgatgca ggcgctcgat
     2341 ctcgccattc atcatgttga agaagatgaa gctgtcgagc cagcgcacca gattgtgctc
     2401 gcccatgcgc acgcccatgt gggccgggct gcggcggatg gtgaacttga gctcgaactc
     2461 cttggccgga ttgcgcttct gcaggtcggg gatgatcagg ctgttggtgg cgaacaactc
     2521 ggcctggccg gagaggtagg ccgccgccgc cgtggcgtcg tcctcggtgc gcatgatcgt
     2581 ggccttgggg ttcatggcgg aaagggccag ctcctgggtc gtgcccttgg cggcggcgac
     2641 tttcaggctg ccgatctcgg ccgccgattt cacgttggcg ctcttgggcc cgaacaccgc
     2701 gagctgggtg t
//
LOCUS       DASWGA010000350         4004 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_670427, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000350 DASWGA010000000
VERSION     DASWGA010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4004
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_670427"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..383)
                     /locus_tag="VF991_08380"
     CDS             complement(78..383)
                     /locus_tag="VF991_08380"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX9556496.1"
                     /translation="MTDKIFAVIRTRGPRWNDSQPMEGQEDWRPHADFMNALEAEGFM
                     LLAGPLVGTRDVLLIVRAEDEQEVEKRLAADCWTVKDLLRTRQISPWWLRLGSLGAP"
     gene            complement(447..1163)
                     /locus_tag="VF991_08385"
     CDS             complement(447..1163)
                     /locus_tag="VF991_08385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9556497.1"
                     /translation="MIDLHYWPTPNGWKISIMLEECGLPYKLMPVNIGTGEQFKPEFL
                     KISPNNRMPAIVDHDPPGDGAAMSVFESGAILQYLAEKTGKFLPKDLRGKYEVLQWVN
                     WQMGGLGPMAGQANHFNVYAPQFNPPEAVTYGQARYTNEVNRLFGVLNKRLADRRYVA
                     GDYSIADMAIWPWVVGFKNFGQKLEDFPNLKKWFEDAVGKRPAVVKGKAVGAELRQTP
                     GINTDEQRKVLFGQTASVVR"
     gene            1307..1828
                     /locus_tag="VF991_08390"
     CDS             1307..1828
                     /locus_tag="VF991_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 domain-containing protein"
                     /protein_id="HEX9556498.1"
                     /translation="MAVSLYDMSVGNYVQTLGGIEGFLSKGLAHFKEKNIDPNDVVEA
                     RLFEDMLPFRFQILATAHHSLGAMRGVQAGLFTPPAQLPPLDYAGLQKAVTEAREALQ
                     KLAPADVNALEGKDVTFKVRDMTMPFTAENFLLSFSLPNFYFHATTAYDILRLKGVPL
                     GKRDFMGRMRLKK"
     gene            complement(1841..2587)
                     /locus_tag="VF991_08395"
     CDS             complement(1841..2587)
                     /locus_tag="VF991_08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556499.1"
                     /translation="MPTSAPEPLLEISGLSAGYGKIGVLQGIDLRVGKGEIVALLGPN
                     GAGKSTLLKAVSGLLPRSGSIRFAGKDMSKAGPRDAVNEGLVHVVEGHRVFTQLTVFD
                     NLLLAGYGMPRGELSARVEEALAFFPEIAAKRADRAITLSGGQQQMLAVAQGLVRRPR
                     LLMLDEPSAGLSPVLVDRVLGAVSRLRTAGTAVLLVEQLIEKALAASDRVYALARGSI
                     VLEARTDEADLPNRLEHAYFGQDVSAPLSA"
     gene            complement(2568..>4004)
                     /locus_tag="VF991_08400"
     CDS             complement(2568..>4004)
                     /locus_tag="VF991_08400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HEX9556500.1"
                     /translation="ALRLRTFYFAMTTLGFATIVTQVALAWKDVTGGGVGTPGPVFPW
                     PFDPGWGFYYFCFILAALATWMTANLASSRFGRALVAIRDSEVAAEASGIAKPRLLVA
                     VFLFAGALGGVAGGLFASLQSYITPDAFTFEMSVLFFIAILIGGRGSILGPALGTIVL
                     TVLPEFAAPLVQWSTFLYAAMLLAIVLLVPGGIADLLDYRNRQPLEQHREIVPRPELL
                     GRVLGARVASSAITLENIALHFGGVRAIDGLDLEIKSGEVHGLIGPNGSGKTTTLNVI
                     SGYYRPNTGLLELDGADLPFDQPQARAGYRIARTFQTPRLVGSASVLENVMIGGTVDG
                     EGSFTESILALPRHHRDEKQIKEAAMQALAAVGLESLANVRADRLQHSELRFVEIARA
                     LMLRPAFLLLDEPAAGLSAEEIRRLGALIVAISREGTGVLLVEHHADLIFDICDRVTV
                     LNLGKVLAAGTPAEIRAHREVVSAYLGA"
BASE COUNT          704 a         1334 c         1325 g          641 t
ORIGIN      
        1 aaaagcctcc cgccccgatt tccccacttc attaccccgc agggccgccg ccaacgtggg
       61 tgtccgcccg ccgaccgtca aggggcgccg agcgagccca agcgcagcca ccaggggctg
      121 atctggcgcg tgcgcagcag gtccttgacg gtccagcaat ccgccgccaa gcgcttctcc
      181 acctcttgct cgtcctcggc gcgcacgatc agcaggacgt cgcgcgtgcc cacgagcggc
      241 ccggccagca gcatgaagcc ctcggcctcc agggcgttca tgaagtcggc gtgcggccgc
      301 cagtcctcct gcccctccat gggctgggag tcgttccagc gcggtccgcg ggtgcggatc
      361 acggcgaaga tcttgtcggt catggcggtc tcctttgccg cctctgtacg acccggtacc
      421 tgtcaattcc tgtcaggatg agcagatcag cgcaccacgg atgcggtctg cccgaacagc
      481 accttgcgct gctcgtcggt gttgatgccg ggcgtctggc gcagctcagc gccgacagcc
      541 ttgcccttca ccacggccgg ccgcttgccg accgcgtcct cgaaccactt cttgaggttg
      601 gggaaatcct cgagcttctg gccgaagttc ttgaagccca cgacccacgg ccagatcgcc
      661 atgtcggcga tcgaatagtc gccggcgaca taccggcgat cggccagacg cttgttgagc
      721 acgccgaaca ggcggttgac ttcgttggtg tagcgggcct ggccgtaggt caccgcctcg
      781 ggcggattga actgcggcgc atagacgttg aagtggttgg cctggcccgc catcgggccg
      841 agcccgccca tctgccagtt gacccattgc agcacctcgt acttgccgcg caggtccttg
      901 ggcaggaact tgccggtctt ctcggcgagg tactgcagga tcgcccccga ttcgaagacc
      961 gacatcgctg cgccgtcgcc cggcggatcg tggtcgacga tggcgggcat gcggttgttg
     1021 gggctgatct tgaggaactc cggcttgaac tgttcgccgg tgccgatgtt caccggcatg
     1081 agcttgtagg gcagcccgca ttcctcgagc atgatggaga tcttccagcc gttcggggtc
     1141 ggccagtaat gcaggtcgat catgatgtgc gtctcctgaa gacgtttgcg ttggcgcaga
     1201 gactagacga tcgacggcac cgggcgaaac ggcgaaggtc taatggccct atgagcaaac
     1261 cgtcgtttcc gctaaggaag atcaaccaga cgggaggaaa ccgaccatgg ccgtttcact
     1321 ttacgatatg agcgtgggca actacgtgca gacgctgggc ggcatcgaag gcttcctgag
     1381 caagggcctc gcgcacttca aggaaaagaa catcgatccg aacgacgtcg tcgaggcgcg
     1441 gctgttcgag gacatgttgc cgttccgctt ccagatcctg gcgacggcgc accattcgct
     1501 gggggcgatg cgcggcgtgc aggccggatt gttcacgccg ccggcccagt tgccgccgct
     1561 cgactatgcc ggcctgcaga aggcggtgac ggaggcgcgc gaggccctgc agaagctcgc
     1621 gccggccgac gtgaacgccc tcgagggcaa ggacgtcacc ttcaaggtcc gcgacatgac
     1681 aatgccgttc acggcggaaa acttcctgct gtcgttctcg ctgccgaatt tctatttcca
     1741 tgccaccacg gcctacgaca tcctgcgcct gaagggcgtg ccgctcggca agcgcgattt
     1801 catgggcagg atgcggctga agaagtgaca gcgcgcgccg ctaggcgctg agcggcgcgc
     1861 tgacatcctg gccaaaatag gcgtgctcca ggcggttggg caggtcggcc tcgtcggtgc
     1921 gcgcttcgag cacgatcgag ccgcgcgcca aggcatagac ccgatcggac gcggccaggg
     1981 ccttttcgat caactgctcg accagcagca cggcggtgcc ggccgtgcgc aggcgcgaga
     2041 cggcgcccag cacgcgatcg accaacaccg gcgacaggcc ggcggagggc tcgtccagca
     2101 tcaggaggcg cggccggcgc accaggcctt gagccaccgc cagcatctgc tgctgtccgc
     2161 ccgacagcgt gatggcgcgg tcagcccgct tggcggcgat ctcggggaag aaggcgagcg
     2221 cctcctcgac ccgcgccgac agttcgccgc gcggcatgcc gtagccggcc agcaggaggt
     2281 tgtcgaacac cgtgagctgc gtgaacacgc gatggccttc gacgacgtgc acgagtcctt
     2341 cgttcaccgc gtcgcgcggg cccgccttgc tcatgtcctt gccggcgaag cgaatgctgc
     2401 cggaacgcgg cagcaggccg gacacggcct tgagcaacgt cgacttgccg gcgccgttgg
     2461 ggccgagcaa cgccacgatt tcgcccttgc cgaccctgag atcgatgcct tgcagcacgc
     2521 cgatcttgcc gtagccggcc gacaagccgc tgatctcgag caggggttca ggcgccgagg
     2581 taggcactga ccacctcccg atgggcgcgg atctcggccg gcgtgccggc cgccagcacc
     2641 ttgccgagat tgagcacggt tacgcgatcg cagatgtcga agatcaggtc ggcatgatgc
     2701 tcgaccagca gcacgcccgt cccctcgcgg ctgatggcga cgatcagcgc gccgagccgc
     2761 ctgatctctt cggccgacag gccggctgcc ggctcgtcga gcagcaggaa ggccggtcgc
     2821 aacatcaggg cgcgcgcgat ttccacgaag cgcagctcgc tatgctgcag gcgatcggcg
     2881 cgcacattgg cgagcgattc cagaccgacg gcggcgagcg cctgcatcgc cgcttccttg
     2941 atctgcttct catcgcggtg atgtcgcggc agggccagta tcgattcggt gaagctgccc
     3001 tcgccgtcga cggtgccgcc gatcatgacg ttctccagca ccgaggcact gccgaccagg
     3061 cgcggcgtct gaaaggtgcg cgcgatgcga tagcccgcgc gcgcctgcgg ctgatcgaac
     3121 ggcaggtcgg cgccgtcgag ctcgagcagg ccagtgttgg gccggtagta gcccgagatg
     3181 acgttgagcg tcgtggtctt gccgctgcca ttcggcccga tcagaccatg cacctcgccg
     3241 gatttgatct cgaggtcgag cccgtcaatg gcgcgcacgc cgccgaaatg caacgcgata
     3301 ttctcgagcg tgattgcact gcttgcgacc ctggcgccca gcacgcggcc cagcagctcg
     3361 ggccgcggca cgatctctcg atgctgctcg agcggctgac ggttcctgta gtccaggaga
     3421 tcggcgatgc cgcccggcac cagcagcaca atcgccagca gcattgcggc gtagagaaac
     3481 gtcgaccact gcaccagcgg cgccgcgaac tcgggcagca ccgtcaggac gatggtaccg
     3541 agcgccggcc ccagaatcga gccacgcccg ccgatcagga tggcgatgaa gaacagcacc
     3601 gacatctcga acgtaaaggc gtcgggcgtg atgtaggact gcagcgaggc gaacagcccg
     3661 cccgccacgc cgcccagggc accggcgaac aggaacaccg cgaccagcag tctgggcttg
     3721 gcgatgcctg aggcttcggc cgcgacctcg gagtcgcgga tggcgaccaa cgcacgcccg
     3781 aagcggctcg aggcgaggtt ggccgtcatc caggtcgcca gtgcggccag gatgaagcag
     3841 aaatagtaga agccccagcc gggatcgaag ggccagggaa aaaccggccc gggcgtgccg
     3901 acgccaccgc cggtaacgtc cttccaggcg agcgccacct gagtgacgat ggtggcgaag
     3961 cccagcgtcg tcatggcgaa atagaaggta cgcagtcgca gcgc
//
LOCUS       DASWGA010000351         4725 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1180205, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000351 DASWGA010000000
VERSION     DASWGA010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4725
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1180205"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VF991_08405"
     CDS             <1..244
                     /locus_tag="VF991_08405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003497308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9556501.1"
                     /translation="LFAAPAHPYTRALVSAIPVATRTGRKRLILKGDPPNPVDVPKGC
                     AFHERCPIAIARCRLETPALRAMADGRQVACHLAAA"
     gene            261..1199
                     /locus_tag="VF991_08410"
     CDS             261..1199
                     /locus_tag="VF991_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556502.1"
                     /translation="MTRYLAGRLLRALLTIFLVVTFAFFVLRLSGDPALLIMSVDAPP
                     ESVEAFRKSWGLDQPIWVQYLAYIVHALTGDLGNSMRDGRPAIQLVLERVPATLAITI
                     PAFLLKIAIGVPAGIYAALHRNSFADRLTMLLSVAGFTMPSFVLALLLVLVFSVKLGW
                     LPSGGSEGMANAILPIVTLGAAGAAILARFTRSAMLEVLGQPYIRAASAKGLSWRRVV
                     TEHALPNAAIPTTTIIGFMVGTLIAGAVVVESVFAWPGIGRLLVVSVANRDLAVVQTI
                     LLLVAATMVTANIIVDFLYGWIDPRMRQNSRGQGPR"
     gene            1295..2068
                     /locus_tag="VF991_08415"
     CDS             1295..2068
                     /locus_tag="VF991_08415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006467139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556503.1"
                     /translation="MLMVALGADWLAPYSFSALDLKARLLPPVLFGGVWRHAFGTDEL
                     GRDVLSRLIVSIRISLLIAFFGTLIAATLGTTLGFLAAHFRRRVEWLILMLIDFHASV
                     PFLIVALAVLAFFGNSLVLFICLMGFNSWERYARIARGLTIAANEQGYASAIRQLGAS
                     SWRVYGVHVLPNIASTLIVSMTITFPETILLESGLSFLGLGVQPPLSSLGNMVGYGRE
                     YLTRASWILLFPSAVIILTTLSISIVGDWLRDRLDPTLR"
     gene            2091..2846
                     /locus_tag="VF991_08420"
     CDS             2091..2846
                     /locus_tag="VF991_08420"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEX9556504.1"
                     /translation="MTEIASHRGGALLWAENSRLAFEHTAKLPVEQVEFDVHPSRDGR
                     LVVIHDATLERTTDGAGAVCQHDWAELSKLILKGSGGQRMLLLDEVIEIFRPTDIILR
                     LEMKAGPNRVPYPGHPARIVAALKAGRILERTVMTSFQLGTAAEVPRHGQPMRHVWLV
                     TPETQIDIGLTAVIDLAHSHGVPMLGLRSSILDAASVAQVRQAGLGLGGWACNDAAAI
                     AKMFDLGVDVFTTDRPDLALALRAGRGSAQGSR"
     gene            complement(2831..3145)
                     /locus_tag="VF991_08425"
     CDS             complement(2831..3145)
                     /locus_tag="VF991_08425"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEX9556505.1"
                     /translation="MNAEDEKIRDAITDAFTRHGIDARNLAVDVRRGTISISGSVPTQ
                     RQRDDLVPTAAAVAPGSVTLQIAVAVVPVAPGDSQDGRGRSPLTGTSADSAHESRHQR
                     DP"
     gene            3317..4663
                     /locus_tag="VF991_08430"
     CDS             3317..4663
                     /locus_tag="VF991_08430"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9556506.1"
                     /translation="MAKTKQLRLGAFMRPVSIHTAAWRYPGGTPDANFNLKALVSYAQ
                     TLERGRFDAFFMADHLAVLNMPMEALKRSATVTSFDPLTLLPALAMATQHLGLIATAS
                     TTFEPAYTIARRFASLDHISGGRAGWNLVTTSNPDAALNFGMDEQMEHGERYARAREF
                     FDVVTGLWDSWADDAFIRDVEQGLYFDPAKLHVLNHKGKYLTVRGPLNIARPIQGWPV
                     MVQAGASDAGRQLAAETAEVVFAAGGPIEAGRAFYADVKGRAARLGRNPDHLKILPGA
                     FTIVGDSLDEAKEKRARLDSLVSYDSGIAALSIAIGQDARKFDPDGPLPEIPETNQSK
                     SGRERVVALAKRENLTVRQLAGRLGGYGGLAVMGTPKMIADQMEEWLMTEASDGFNVM
                     FPHLPGGLDDFVNKVVPELQRRGLFRTEYEGATLRENLGLPRPENRFFSATAKAAE"
BASE COUNT          680 a         1684 c         1507 g          854 t
ORIGIN      
        1 gctgttcgcc gcaccggcgc atccctacac gcgggcgctg gtttcggcga tccccgtggc
       61 gacccggacc gggcgcaagc gactgatcct gaaaggcgat ccacccaacc cggtcgatgt
      121 gcccaagggc tgcgccttcc acgagcgttg cccgatcgct atcgcgcggt gccgcttgga
      181 aacgccggcg ctgcgtgcga tggcggacgg acggcaggtc gcctgccacc ttgccgcggc
      241 atgaagggga gcaggcccgc atgacacgct atctcgccgg acggctgctg agggcgctgc
      301 tcaccatctt cctggtggtg accttcgcct tcttcgtgct ccgcctgtcc ggcgatccgg
      361 cgttgctgat catgtcggtc gatgccccgc ccgaatcggt cgaggcgttt cgcaagtcgt
      421 ggggtctcga tcagccgatc tgggtgcaat acctcgcgta tatcgtccac gccctgaccg
      481 gcgatctcgg caattccatg cgcgacggca ggccggcgat ccagctcgtg ctcgagcgcg
      541 tgccggcgac gctggcgatc accattccgg cgtttttgct gaaaatcgcg atcggcgtgc
      601 cagctggcat ctatgccgcc ctgcaccgca attccttcgc cgatcggctc accatgctgc
      661 tgtcggtcgc gggcttcacc atgccgagct tcgtgctggc gctcctgctg gtcctggtct
      721 tttccgtgaa gctcggctgg ctgccgagcg gcggcagcga gggcatggcc aatgcgatcc
      781 tgcccattgt caccctgggc gcggcggggg cggcgatcct cgcccgcttc acccgctcgg
      841 cgatgctcga agtgctgggc cagccctata tccgggcggc ttcggccaag ggcttgtcgt
      901 ggcggcgggt ggtgaccgag cacgcgctgc ccaatgccgc catcccgacc acgaccatca
      961 tcggcttcat ggtcggcacc ctgatcgccg gcgccgtggt ggtcgaaagc gtgttcgcct
     1021 ggcccggcat cggacgcctg ctggtcgtct cggtcgccaa tcgcgacctc gccgtcgtgc
     1081 agaccatcct gctgcttgtc gcggcgacca tggtgacggc caacatcatc gtcgacttcc
     1141 tctatggctg gatcgacccg cgcatgcgcc agaactcacg aggacagggc ccgcgatgac
     1201 cgcgacctcg atcccgctcc agcgcagccg ccgcgcgcgg ttccttgaag cctggccgcc
     1261 gctgacgctt gcggcgcttg cctggatcct gctgatgctg atggtggcat tgggcgccga
     1321 ctggctggcg ccctattcct tctcggccct tgacctcaag gcgcggctgt tgccgcctgt
     1381 cctgttcggc ggcgtctggc gtcatgcgtt cggcaccgac gagcttggcc gcgacgtgct
     1441 ttcgcgcctg atcgtgtcga tccgcatcag cctgctgatc gccttcttcg gcaccttgat
     1501 cgctgccacg ctcggcacga cgctcggttt cctcgccgcc catttccgcc gccgggtcga
     1561 atggctgatc ctgatgctga tcgatttcca cgccagcgtg cccttcctga tcgtggccct
     1621 ggcggtgctc gccttcttcg gcaactcgct ggtgctgttc atctgcctga tggggttcaa
     1681 cagctgggag cgctacgctc gcatcgcgcg cggcctcacc atcgccgcca acgagcaggg
     1741 ctatgctagc gccatccgcc agctcggcgc ctcgagctgg cgcgtctatg gcgtccatgt
     1801 cctgcccaac atcgcctcga ccctgatcgt ctccatgacc atcacctttc ccgagacgat
     1861 cctgctggaa agcggcctgt cgtttctcgg gctgggcgtg cagccgccgc tcagttccct
     1921 tggcaacatg gtgggctacg gccgcgagta cctgacgcgg gcctcgtgga ttttgctgtt
     1981 ccccagcgcg gtcatcattc tcaccacgct gtcgatcagc atcgtcggcg actggctgcg
     2041 cgatcgcctc gatccgaccc tgcgatgacc tcgagtggag ctgccgaacg atgaccgaaa
     2101 tcgcctcgca ccgtggcggc gccctgctgt gggcggagaa cagccgtctc gccttcgagc
     2161 ataccgcgaa gctgccggtc gagcaggtcg aattcgacgt ccatccgtcg cgcgacggca
     2221 ggctggtggt gatccacgac gccacgctgg agcggaccac cgacggcgcc ggcgccgtct
     2281 gccagcacga ctgggccgag ctctccaagc tcatcctcaa gggcagcggc ggccagcgca
     2341 tgctgctgct cgacgaggtc atcgagatct tccggcccac cgacatcatc ctgcgcctgg
     2401 agatgaaggc cggtccgaac cgggtgcctt atcccggcca tcccgcccgc atcgtcgccg
     2461 cgctcaaggc ggggcgcatc ctcgagcgca cggtgatgac cagtttccag ctcgggaccg
     2521 cggccgaggt gccgcgtcac ggccagccga tgcgccatgt ctggctggtg acgcccgaga
     2581 cccagatcga tatcggcctc accgcggtga tcgacctggc ccattcgcac ggcgtgccca
     2641 tgctcggctt gcgcagcagc atcctcgatg ccgcgagcgt cgcccaggtc cgccaggccg
     2701 gcctcggcct cggcggctgg gcctgcaacg atgcggcggc aatcgccaag atgttcgatc
     2761 tcggcgtcga tgtgttcacc accgaccgtc cggatcttgc gctggcactc agagccggcc
     2821 gcgggtccgc tcagggatcg cgctgatggc ggctctcgtg ggcggagtcg gccgatgtcc
     2881 cggtcaaggg cgaacggcct cgtccgtcct gactgtcgcc cggcgcgaca ggaaccaccg
     2941 ccacggcgat ctgcagcgtc acgctgcccg gtgcgaccgc tgcggccgtt ggcacgaggt
     3001 cgtcgcgttg ccgttgggtc ggaacgcttc cgctgatgct gatcgtgccg cggcgcacgt
     3061 cgacggcgag attgcgggca tcgataccgt gtcgggtgaa ggcatccgtg atcgcgtcgc
     3121 gaatcttctc gtcttcggcg ttcatatcga tctccggttc ctgtctcgac aagcaacggt
     3181 ctgcgacggc cgagggttgc cgggccggtt gccggccacg gcctacttat cggtcgaatt
     3241 agttcttgtc gcctaaccgg gcttgccggc cggccatgga cccgcctatg tctctcgcaa
     3301 tcctcgcgag gcttccatgg ccaaaaccaa gcagctgcgc ctcggcgcct tcatgcgccc
     3361 ggtcagcatc cataccgccg cctggcgcta tcccggcggc acgccggacg ccaacttcaa
     3421 tctcaaggcc ctggtgagct atgcccagac cctggagcgc ggccgcttcg acgccttctt
     3481 catggccgat cacctggcgg tgctgaacat gcccatggag gcgctgaagc gcagcgccac
     3541 ggtcacctcg ttcgatccgc tgacgctgct gcccgcgctg gccatggcga cccagcatct
     3601 cggcctgatc gccaccgcct cgaccacctt cgagcccgcc tacaccatcg cccgccgctt
     3661 cgcctcgctc gaccacatct cgggcggccg cgccggctgg aacctggtga cgacatcgaa
     3721 ccccgacgcc gcgctcaatt tcggcatgga cgagcagatg gagcatggcg agcgctatgc
     3781 ccgcgcccgc gagttcttcg acgtcgtcac cggcctgtgg gactcgtggg ccgacgacgc
     3841 cttcatccgc gacgtcgagc agggcctcta tttcgatccg gccaagctcc acgtgctgaa
     3901 ccacaagggc aagtatctga cggtgcgcgg accgctcaac atcgcccggc cgatccaggg
     3961 ctggccggtg atggtgcagg ccggcgcctc ggatgccggc cgccagctcg ccgccgagac
     4021 ggcggaggtg gtgttcgccg ccggcgggcc gatcgaagcc ggccgcgcct tctatgccga
     4081 cgtgaagggc cgggcggccc ggctcggccg caaccccgac catttaaaaa tcctgcccgg
     4141 cgccttcacc atcgtcggcg actcgctcga cgaggcgaag gaaaagcgcg cccggctcga
     4201 cagcctggtg agctacgaca gcggcatcgc cgccttgtcg atcgcgatcg gccaggacgc
     4261 ccgcaagttc gatcccgacg ggccgctgcc cgagattccc gagaccaacc agagcaagag
     4321 cggccgcgag cgcgtggtgg cgctggccaa gcgcgagaac ctgacggtgc gccagcttgc
     4381 cggccgcctg ggcggctatg gcgggctggc cgtcatgggt acgcccaaga tgatcgccga
     4441 ccagatggag gaatggctga tgaccgaagc cagcgacggc ttcaacgtca tgttccccca
     4501 cctgccgggc gggctcgacg atttcgtcaa caaggtcgtg cccgagctgc agcgccgcgg
     4561 cctgttccgc accgaatacg agggcgcgac cttgcgtgag aatctcggcc tgccgcggcc
     4621 ggagaatcgc ttcttctccg caacggcgaa agccgcggag taggcgcttt acttcccccg
     4681 tccggtgatc atcggcaggt cgatggcatt ggccatcgcc gcata
//
LOCUS       DASWGA010000352         4542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_422768, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000352 DASWGA010000000
VERSION     DASWGA010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4542
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422768"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1371
                     /locus_tag="VF991_08435"
     CDS             <1..1371
                     /locus_tag="VF991_08435"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX9556507.1"
                     /translation="WSGALPAMSPDDRRNAMLSGPLVPTILTLAAPNVVNVSVQSLVL
                     IADGWFVGRLGTAELAALALVFPAQTTLQMMSAGAMGGGVSSSVARALGSGDRGKAED
                     AAAHALAIAAAMTVLFAVAFVGFGRPLFGALGGSGAALEGAVAFSTVMFLGCGAHWLA
                     NTLASILRGTGDMHSPGVALIAMAIVQIPASGALTLGWAGLPQLGVAGPAAAAVMSYT
                     IAALWILRPIVQGRAAIRLRWPVHGFRWSAFADILKVGATSCIVVVLINAAVLVVTGL
                     IGRAGDAAIAGYGVGSRLEYLLSPLTFGIGAALTAMVGTNKGARQLGRARQAAWSGAL
                     MAGAVTLAIGLVVALWPDLWLRLFTDDPAALAAGRLYFGIVGPTYGLFGLAMALNFAA
                     MGAGDMVWPTLATAARFAIAAGGGLLALDLLGWSAPGLYACVAAGMVAYSLLLALSTT
                     RRAWHV"
     gene            1424..2218
                     /gene="cobF"
                     /locus_tag="VF991_08440"
     CDS             1424..2218
                     /gene="cobF"
                     /locus_tag="VF991_08440"
                     /EC_number="2.1.1.152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043819 - precorrin-6A synthase
                     (deacetylating) activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6A synthase (deacetylating)"
                     /protein_id="HEX9556508.1"
                     /translation="MKTILIIGIGAGDPDYITVQAIKALNRVDVFFLMDKGPAKAKLR
                     ALREELCRLHVKDRAYRFAEAKSPPRDTAPADYRASVDELNREKQALFERMIEQEMTD
                     GEIAGILVWGDPMLYDSTIRNVEAIAQERRSGGRQQIDYDVIPGITAVQALAARHKIP
                     LNRIAEPVALTTGRRLAEGFPRDIDSVAVLLDGEDTFRRFADPKVHGNMEIYWGAYLG
                     TPDEILIAGKLAEVADEIHHRRAEARRANGWIMDTYLMRRVTTRSD"
     gene            2415..2879
                     /locus_tag="VF991_08445"
     CDS             2415..2879
                     /locus_tag="VF991_08445"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9556509.1"
                     /translation="MTATKGFVVPAGGGKHLDMMAPGRSAALKLLGHETGESIMLFEE
                     TVPAGTMSTFHLHHDSDEVAWVLEGEITFKIGEEVSVGGPGACAFFPRNVPHAWKNPG
                     SETGRVLFLYTPAAAGAYVESLLERPGGPIDEDERDKVRRRYRWEVVGPNPL"
     gene            complement(3047..3340)
                     /locus_tag="VF991_08450"
     CDS             complement(3047..3340)
                     /locus_tag="VF991_08450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020830892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HEX9556510.1"
                     /translation="MATYCILGNFTEQGVRNAKDSPKRADAFKEMAKKCGATVKEVYW
                     AQGQYDVVTILEAPDDLAVTSLGLSVGALGNIRTQTLRLFSAADMKGIIDKMP"
     gene            complement(3490..3654)
                     /locus_tag="VF991_08455"
     CDS             complement(3490..3654)
                     /locus_tag="VF991_08455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556511.1"
                     /translation="MGSIENPHKHTREQACRHADSILAFDKLTFNLGPSQLAPEDRKK
                     VREGISRAKD"
     gene            3695..3943
                     /locus_tag="VF991_08460"
     CDS             3695..3943
                     /locus_tag="VF991_08460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556512.1"
                     /translation="MKSLTTFMICASLVMPFAALAQSADAKYCAALSAEYRKLNTMAT
                     TGTEADAMAKCAAGDTATGIPILEKALKDAKVTLPPRS"
     gene            complement(4172..>4542)
                     /locus_tag="VF991_08465"
     CDS             complement(4172..>4542)
                     /locus_tag="VF991_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018327201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008184 - glycogen phosphorylase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HEX9556513.1"
                     /translation="FGLTADQVAGSRGWYAPQWHYDNEPETQKALDLIFSDHFSREEH
                     GIFEPLRGPLMGHDHYMHLADLTSYLEADRRLLELYADPQEWARKAILNIASSGKFSS
                     DRTIAEYAAEIWGAKPCPVP"
BASE COUNT          718 a         1539 c         1483 g          802 t
ORIGIN      
        1 tggagtggcg cgctcccagc gatgagtcct gacgatcgcc gcaacgccat gctgtcggga
       61 ccgctggtgc cgacaatcct cacgcttgca gcacccaacg tcgtcaacgt ctcggtgcag
      121 agcctggtgc tgatcgccga cggctggttc gtgggccggc tcggcacggc cgagcttgcg
      181 gcgctggcgc ttgtctttcc cgcgcagacc accctgcaga tgatgtcggc cggcgccatg
      241 ggcggcggcg tctcctcgtc ggtggcgcgc gcgctgggct cgggcgatcg cggcaaggcc
      301 gaggacgccg ccgcgcacgc gctcgccatc gcggcggcca tgacggtgct gttcgcggtc
      361 gccttcgtgg gtttcggccg gccgctgttc ggcgcgctgg gcggcagcgg cgcggcgctc
      421 gagggcgccg tcgccttctc gaccgtgatg ttcctgggct gcggcgcgca ttggctggcc
      481 aacacgctgg cctcgatcct gcgcggcacc ggcgatatgc actcgcccgg cgtggcgctg
      541 atcgcgatgg ccatcgtcca gatcccggcc tccggcgccc tgaccctggg ttgggccggc
      601 ctgccccagc tcggcgtcgc cggaccggcg gcggcggcgg tgatgtccta caccatagcc
      661 gcgctgtgga tcctgcggcc gatcgtgcag ggccgcgccg cgatccgcct gcgctggccg
      721 gtgcacggct tccgctggtc cgccttcgcc gacatcctga aggtgggcgc cacctcgtgc
      781 atcgtcgtcg tgctgatcaa tgccgccgtg ctggtcgtca ccggcctgat cggccgcgct
      841 ggcgatgccg ccatcgcggg ctacggcgtc ggcagccggc tggaatatct tttgagcccg
      901 ctcaccttcg gcatcggcgc ggcgctcacc gccatggtcg gcaccaacaa gggcgcccgc
      961 cagctcggcc gcgcccggca ggcggcgtgg agcggcgccc tgatggcggg cgccgtcacg
     1021 ctggcgatcg gcctcgtcgt ggcgctgtgg cccgatctct ggctgcggct gttcaccgac
     1081 gatccggccg cgctggccgc cggccggctt tatttcggca tcgtcggccc gacctacggc
     1141 ttgttcggcc tggcgatggc gctcaacttc gccgccatgg gcgcgggcga catggtctgg
     1201 ccgacattgg cgacggccgc ccgcttcgcc atcgccgccg gcggcggcct tttagccctc
     1261 gacctgctgg gctggagcgc gcccgggctt tacgcctgcg tcgccgccgg catggtcgcc
     1321 tactcgctcc tgcttgccct ctcgacgacg cgacgggcgt ggcacgtctg atcggccgcc
     1381 cgataccctg atacaagggg cggacgagcg gacggagtgg agcatgaaaa ccatcctgat
     1441 catcggcatc ggcgccggcg atcccgacta catcacggtg caggcgatca aggcgctgaa
     1501 ccgggtcgat gtcttcttcc tgatggacaa gggcccggcc aaggcgaagc tgcgcgcctt
     1561 gcgcgaggag ctttgccggc tgcacgtcaa ggaccgcgcc taccgcttcg ccgaggctaa
     1621 aagcccgccg cgcgacaccg cgccggccga ctaccgcgcc tccgtcgacg agctcaatcg
     1681 cgagaagcag gccctcttcg agcgcatgat cgagcaggag atgacggacg gcgagatcgc
     1741 cggcattctc gtatggggcg acccgatgct ctacgacagc accatccgca acgtcgaggc
     1801 gatcgcccag gaacgtcgat cgggcggccg gcagcagatc gactacgacg tcatccccgg
     1861 catcaccgcg gtgcaggcgc tggcggcccg gcacaaaatt ccgctcaacc gcatcgctga
     1921 gccggtggcg ctgacgacgg gccgccggct cgccgagggc ttcccgcggg acatcgacag
     1981 cgtcgccgtg ctgcttgacg gcgaggacac ttttaggcgc ttcgccgacc ccaaggtcca
     2041 tggcaacatg gaaatctact ggggcgccta tctcggcacg ccggacgaga tcctgatcgc
     2101 cggcaaactc gccgaggtcg ccgacgagat ccatcaccgg cgcgccgagg cgcgacgggc
     2161 gaacgggtgg atcatggata cctatttgat gcgcagggtt acaacgcgtt ccgattaact
     2221 gccctcgcac gagcttgagt taagaaaacg ctgtcatccc gagcgaagca aggacctttg
     2281 atcggcgtcg cgaaaggtcc ctcgctacgc tcggaatgat accgaacgta aacagcgaac
     2341 gatttacctc tggcgccgtt gtcgggcgag tcgccggcgt ttatcctcat tgcgccgcac
     2401 ggaaggacac taccatgacc gcaacaaagg gttttgtcgt acccgcgggc ggcgggaagc
     2461 atctcgacat gatggcgccc ggtcgctccg ccgccttgaa gctcctcggc cacgagaccg
     2521 gtgagagcat catgctgttc gaggaaaccg tgcccgccgg caccatgagc accttccatc
     2581 tccaccacga cagcgacgag gtcgcctggg tgctcgaggg cgagatcacc ttcaagatcg
     2641 gcgaggaggt cagcgtcggc gggcccggcg cctgcgcgtt cttcccgcgc aacgtcccgc
     2701 atgcctggaa gaaccccggc agcgaaaccg gccgcgtgct gtttctctac accccggccg
     2761 ccgccggcgc ctacgtcgag tcgctcctgg agcgccccgg cggtccgatc gacgaagacg
     2821 aacgcgacaa ggtccgccgg cgctaccgct gggaagtggt cgggccgaac ccgctttgag
     2881 cgggacgctt ttcgcacgag ctgggattaa gaaaacggtg tcatcccgag cgaagcgagg
     2941 gacccttgat tggcgtcgcg aaaggtccct cgctacgctc gggatgacac cgaacgtaaa
     3001 cgacgaacgg ttccacgcca tctaaattcg cgtcagccgc tccggtctac ggcatcttgt
     3061 cgatgatgcc cttcatgtcg gccgccgaga acaacctgag cgtctgcgtg cggatgttgc
     3121 ccagcgcgcc gacgctcaag ccaagcgagg tgaccgcgag gtcgtcgggc gcctcgagga
     3181 tggtgacgac gtcgtactgt ccctgcgccc agtagacctc cttgaccgtc gccccgcatt
     3241 tcttcgccat ctccttgaag gcgtcggcac gtttgggcga gtccttggcg ttgcggactc
     3301 cctgctcggt gaagtttcca agaatgcaat aggtcgccat agcgatcctc cctcagtatt
     3361 gggaacgcac ttctacatgg gactttcctc gcgactgcca aagcagtcgc cctagattat
     3421 gcccggatcg gccgaggggc gacaccagtt caccctgacg tcgatcggca cgaaaccacc
     3481 gcattccggc tagtctttcg ctctgctgat gccttcccgc actttcttcc ggtcttccgg
     3541 ggccagttgc gacggtccga ggttgaacgt cagcttgtcg aaggcgagga tcgaatctgc
     3601 atggcggcag gcttgttctc tagtatgctt gtgggggttc tcgatcgaac ccacggggga
     3661 gagcttctgt aacctcgctt cttgggagga tgtcatgaag tctctgacca cattcatgat
     3721 ctgtgcgtcg cttgtcatgc cattcgcggc gctcgcccag tcggccgacg ctaagtactg
     3781 tgcggcgctg agcgcggagt accgaaagct caacaccatg gcaactacgg gcactgaagc
     3841 cgatgccatg gcgaagtgcg ccgcaggcga cacggctacc ggcattccca ttctcgaaaa
     3901 ggccctcaag gacgccaagg tcacgttgcc accgcggagc tagatcccgc cagcgttacg
     3961 cgacagccct cgcatctgcg tccggggatg gggggcagta tgacgggcag cgatctccat
     4021 cgctatccag atcgttggct ggagccgaga tgttgcgtgc gccgcggagt cgctgtcgcc
     4081 catgacccct ccgccccctt cgacttcgct cggggcaggc gctacgcggg cacctcccca
     4141 cgcgaagcgt ggggaggcag gactttgtcg tctagggcac ggggcacggc ttcgcacccc
     4201 agatttcggc ggcgtactcg gcgatggtgc ggtcgctgga gaattttccg gaactcgcga
     4261 tgttcaggat ggcctttcgc gcccactcct gcggatcggc gtacagctcg agcagccgtc
     4321 ggtccgcctc cagataggac gtgagatccg ccaggtgcat gtaatggtcg tggcccatca
     4381 aggggccgcg caacggctcg aagatgccgt gctcttcgcg gctgaagtgg tcggagaaga
     4441 tcaagtccag cgccttctgc gtctccggct cgttgtcgta gtgccactgc ggggcatacc
     4501 agccacggct gcccgccacc tggtccgcgg tcagcccgaa ca
//
LOCUS       DASWGA010000353         2800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1808737, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000353 DASWGA010000000
VERSION     DASWGA010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1808737"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VF991_08470"
     CDS             complement(<1..513)
                     /locus_tag="VF991_08470"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HEX9556514.1"
                     /translation="MTLPPKRAIFIAIAALIVTLLVTRNYWQQPVLGFLGLAGEDDRY
                     LGYVEGETSLIAPPVAGQLLERPVDRGGRVKKGDRLFVIDPTLARAEVARAEAALAEA
                     KARHENLLTGKRPEEQDVIRAQRHEIEASLAMAETELKRQTDLLPRGFTTRQAYDQAE
                     SQVFQLRARLA"
     gene            complement(510..1154)
                     /locus_tag="VF991_08475"
     CDS             complement(510..1154)
                     /locus_tag="VF991_08475"
                     /inference="COORDINATES: protein motif:HMM:NF036525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9556515.1"
                     /translation="MNPTKQRRAPAQRPGEILDAALALFVEKGFAATRLDDVAVRAGL
                     SKAAIYLYFEDKTALFQGVVRQAVVANLGTVEAMLKAHRGPVASLLPRILEFMAGRIE
                     ETPLAAVAKVVISESRAFPEIGRFYLKEVIGRGLPLLEGLIRRGIAQGEFRRVDPAMT
                     VRSIVGPMLLAGIWRTVFEPIGAEKLDVRALARHHADLMLHALAIKPGMKAGTS"
     gene            complement(1366..>2800)
                     /locus_tag="VF991_08480"
     CDS             complement(1366..>2800)
                     /locus_tag="VF991_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX9556516.1"
                     /translation="DMPIRRTVRTLVMASLVTPPFVGAIAWEMLAAPNSGLLNQLWRT
                     LSGMPPDEALLDIYNLPGLIFVIACYTFPYVFILVANALDRMPGELEDASSMLGAKTW
                     QTARRITVPLALPTLLAGALVAFLQALNLFGSPAILAIPAGFHTLTTRIWSLFQFPPK
                     PELAAAASLPLLLLTIVLLRGQALALGRRGYAVLGGKYGEPRLVRLGWLRWPAAALAL
                     FILAMPLFLPYAALFNSAFSRVASKLVTFDTITLHNVRFTFLELSSTMPALKNTFLLA
                     TASATLGALLALLIAYIVARRAVPGHRVLAFLATAPLAIPGIVLGVGLFLAYTRPPLT
                     LYGTLWILLIAFVTIELPAAYQQLSSAFHAVHPELEEAGRMLGATRLRTLADITAPLL
                     RSAVIATWCFVFVAVIRELSAAVILFTSETKVLSVLIFDLKESGDVGAIAVLSLAMVG
                     ITTIVIAIANRLGGGRESGRLHARAAG"
BASE COUNT          502 a          891 c         1008 g          399 t
ORIGIN      
        1 agcgagccgc gcgcgcagct ggaagacctg ggattcggcc tggtcgtagg cctggcgcgt
       61 cgtgaagccg cgcggcagca ggtcggtctg gcgcttgagc tcggtctcgg ccatcgccag
      121 gcttgcctcg atctcgtggc gctgggcgcg aatgacgtcc tgctcctccg gccgcttgcc
      181 ggtcaaaagg ttctcgtgcc gcgccttggc ttcggcgagc gccgcctccg cgcgcgccac
      241 ctcggcgcgg gccagggtcg gatcgatgac gaacaggcgg tcgcccttct tgacccggcc
      301 gccgcgatcg accggccgct cgaggagctg gcccgcgacc ggcggcgcga tcaggctggt
      361 ctcgccctcg acatagccga gatagcgatc gtcctcgccg gccaagccga ggaagcccag
      421 caccggctgc tgccagtagt tgcgcgtcac cagcagcgtc acgatgagcg cggcgatggc
      481 gatgaagatc gcgcgcttgg gagggagcgt catgacgtcc cggctttcat gcctggcttt
      541 atggccaacg cgtgcaacat caaatcggcg tggtgccgcg ccagcgccct gacatcgagc
      601 ttctccgcgc cgatcggctc gaacacggtg cgccagatgc cggccagcaa catggggccg
      661 acgatcgagc gcacggtcat cgcgggatcg acgcggcgga actcgccttg ggcgatgccg
      721 cgcctgatca acccttcgag caggggcagg ccgcggccga tcacctcctt gaggtaaaaa
      781 cgtccgatct cgggaaaggc ccgcgattcg gagatcacga ccttggcgac cgcggccaac
      841 ggcgtctctt cgatgcggcc ggccatgaac tccaggatgc gcggcagcag cgacgccacg
      901 ggcccgcgat gcgccttcag catcgcctcg accgtgccga gattggccac gaccgcttgg
      961 cggacgacac cttggaacag cgcggtcttg tcctcgaaat aaagatagat cgcggccttg
     1021 gagagtccgg cgcggaccgc gacgtcgtcc aggcgcgtgg cggcaaagcc cttctcgacg
     1081 aagagcgcga gcgcggcgtc gaggatctcg cccggacgct gggccggggc acggcgttgt
     1141 ttggttgggt tcatgggaac taacttactg ttcagttagt tgagagacaa gcctccacct
     1201 ttcgaagtcg gacattattc cgcttcttca atgacttggg ttgaacgcag aacagatgcc
     1261 ccctgttcct cttctcatgc tcttctggac cgcgcgcatc ttgcgcgctc atgagcgcgc
     1321 gggacgcgcg cggtccggaa gagcgtgaaa agacgcgcca ctggactagc ccgcagcacg
     1381 agcatgcagg cggccgctct cgcgcccgcc acccagccgg ttggcgatgg cgatcacgat
     1441 cgtggtgatg ccgaccatgg cgaggctcag cacggcgatg gcgccgacat cgccgctttc
     1501 cttgaggtcg aagatcagca ccgacagcac cttggtctcc gacgtgaaca ggatcacggc
     1561 ggccgaaagc tcgcggatca cggcgacgaa gacgaagcac caggtggcga tcaccgccga
     1621 gcgcagcagc ggcgcggtga tgtcggccag tgtgcgcagc cgcgtggcgc ccagcatgcg
     1681 gccggcctcc tcgagctcgg gatgcaccgc gtggaaggcc gaggagagct gctggtaggc
     1741 ggccggcagc tcgatggtga cgaaggcgat gagcaggatc cacagcgtgc cgtagagcgt
     1801 gagcggcggg cgcgtgtagg cgaggaacag accgacgccc agcacgatgc cggggatggc
     1861 cagcggcgcg gtggcgagga aggcgagcac cctgtggccg ggcacggcgc gtcgcgcgac
     1921 gatgtaggcg atcaacaggg caagcagcgc gcccagtgtc gccgatgcgg tcgccagcag
     1981 gaaggtgttc ttgagcgccg gcatggtcga gctgagctcg aggaacgtga aacgcacatt
     2041 gtgcaaggtg atggtgtcga aggtcacgag cttggaagcg accctcgaga aggcggagtt
     2101 gaacagcgcc gcgtagggca ggaacagcgg catggcgagg atgaagagcg ccagcgccgc
     2161 cgccggccag cgcagccagc ccaggcgcac cagccgcggc tcgccgtact tgccgcccag
     2221 cacggcatag ccgcggcggc ccaacgccag cgcctggcca cgcagcagca cgatggtgag
     2281 cagcaggagc ggcagcgagg cggcggccgc caactcgggc ttgggcggga actggaacag
     2341 gctccagatg cgcgtggtga gcgtgtggaa gcccgccggg atggcgagga tggccggcga
     2401 gccgaacagg ttcagcgcct gcaggaaagc gaccagcgcg ccggccagca aggtgggaag
     2461 tgccagaggt acggtgatgc gccgcgccgt ctgccaggtc ttggcgccca gcatcgagga
     2521 cgcgtcctcg agctcgcccg gcatgcggtc gagcgcgttg gcgaccagga taaagacgta
     2581 cggaaaggtg tagcaggcga tgacgaagat caggccaggc agattgtaga tgtcgagcaa
     2641 ggcctcgtcc ggcggcatgc cgctcagcgt ccgccagagc tggttgagca ggccggaatt
     2701 gggcgccgcc agcatctccc aggcgatggc gccgacgaac ggcggcgtca ccagcgaggc
     2761 catgaccagc gtgcgcacgg tgcggcggat cggcatgtcg
//
LOCUS       DASWGA010000354         4686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2451297, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000354 DASWGA010000000
VERSION     DASWGA010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4686
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2451297"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VF991_08485"
     CDS             <1..435
                     /locus_tag="VF991_08485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HEX9556517.1"
                     /translation="MSSSHHTPDLLKETGFDFLMDWPADDQPLWMKTRSGPLMSVPYP
                     IEINDSPQILVRHHTPEQFRDFIVGQFEELLRQSAKQPLVCGIALHTMIVGQPYRLRM
                     LREGLQHIVSHPQKDKVWFTRPSAIYDHCAALPKGTMTPPPA"
     gene            446..2137
                     /gene="pgm"
                     /locus_tag="VF991_08490"
     CDS             446..2137
                     /gene="pgm"
                     /locus_tag="VF991_08490"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004614 - phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucomutase
                     (alpha-D-glucose-1,6-bisphosphate-dependent)"
                     /protein_id="HEX9556518.1"
                     /translation="MPVKDAPAADAAPRVDPRAGQPPSTGQLVDVAKLIDAYYTRQPD
                     PATPAERVAFGTSGHRGSSFDSTFNEAHVLAISQAICLYRQRERISGPLFIGCDTHAL
                     SRPAFESALEVLAANGVEVMISKDGEYTPTPAISQAILVHNRGRRDGLADGIVITPSH
                     NPPEDGGFKYNPPNGGPADTDVTGWIQNQANGILEAGLADVKRLPFEQAQRAATTRAY
                     DFLETYTADLGNVIDFDAIRASGIRMGVDPLGGAGVHYWARIAERYRIDLTVVSEQVD
                     PTFSFMTLDWDGRIRMDPSSSYAMRRLIGLKDKYDIAFACDTDHDRHGIVVPGVGLMQ
                     PNNFLSVAIDYLFRHRPEWKADAAVGKTVVSSAMIDRVAARLGRKLYEVPVGFKWFVD
                     GLFDGSLGFGGEESAGASFLRRDGTVWTTDKDGITAALLSAEITARVGRNPGLLYRDI
                     TRDLGEATAARIDAPASPAQKRKLAALSPQQVRIKEMAGEPVKSVLTRAPGNDAAIGG
                     IKVVAENGWFAARPSGTEDVYKIYAESFRGEEHLRALLHEAQVIVDAALATEGGT"
     gene            2157..3383
                     /locus_tag="VF991_08495"
     CDS             2157..3383
                     /locus_tag="VF991_08495"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9556519.1"
                     /translation="MAKLAELADWLADSGLRNLPLEEMVDGFARRLNDMGVPVARIFV
                     GMNTLHPMVRIRSLIWDRATGPATHFEFRHADIDAPILQESPFAPMLRDGVGERRRRV
                     DDPLVVGEAPVFEELHAAGMTEWLGRVFPFGELVPQIGGPHEAEHVERQWLVCSLTTD
                     RPGGYLDADTAVLRQVLPVFALAVKAVAIRAIGHGLLAAYLGDDPASRVFAGTVQRGE
                     VQSVEAIVFFTDLRGFTALADTMAGQELIALLDECFECMVAPVVKRGGEVLKFMGDGL
                     LAAFAAGSVNRAAACSAALDAAIEALALMEALNARRQAEGRRTTGLDLVLHIGTVQYG
                     NVGTAQRLDFTVIGPAVNEASRIEKLCEPLGQNLLISHQFAEAAVSCRSRLVSLGRHR
                     LRGVREETELFALLSS"
     gene            complement(3495..>4686)
                     /locus_tag="VF991_08500"
     CDS             complement(3495..>4686)
                     /locus_tag="VF991_08500"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9556520.1"
                     /translation="ESQFTRRNAMKAQADRILKEAVSKGDVPGVTAAATDAKGMTYEA
                     GFGKRVLGEPADMTPDTVVWIASMTKAITGAAAMQLVERGKLELDAPAKAVVPQLGEV
                     GVLDGFDAAGKPRTRKPKRDITLRHLLTHTAGFGYDIWSPEVGKYMEAMEVPGVISCQ
                     NKALTTPLLFDPGERWFYGINIDWAGKMVEAVGGKKLGQYMRDNILGPLGMDSTGFFI
                     NESMRKRLAKIHHRGPDSSLTPDTALELPQEPEFEMGGGGLYSTAGDYLRFVRMMLNQ
                     GKSDRGEAVLKPETVALMSKNAMGESKVTMLKTAAPPFSNDAEFFPGMDKQWGLSFMI
                     NNEEAPTGRSAGGLAWAGLANTYFWIDQKKGVGGVYLTQVLPFADTKALPLFYAFEST
                     VYGK"
BASE COUNT          758 a         1565 c         1541 g          822 t
ORIGIN      
        1 atgagttcca gccatcacac gcccgatctc ctgaaggaga ccggcttcga cttcctgatg
       61 gactggccgg ccgacgatca gccgctatgg atgaagacgc ggtcgggccc gctgatgagc
      121 gtgccctatc cgatcgagat caacgacagc ccgcagatcc tggtgcgcca tcacacgccc
      181 gagcaattcc gcgacttcat cgtcggccag ttcgaggagc ttttgcgcca atcagccaag
      241 cagccgctgg tgtgcggcat cgcgctccac accatgatcg tgggccagcc ctatcggctg
      301 cggatgctgc gcgaggggtt gcagcacatc gtcagccatc cgcagaagga caaggtgtgg
      361 ttcacgcggc cgtcagcgat ctatgaccat tgcgcggcgc tgcccaaggg gacaatgacc
      421 ccgccgccag cgtagactta aggtcatgcc tgtcaaagat gcgcccgccg ccgacgctgc
      481 ccccagggtc gatccgcggg cggggcagcc gccgtcgacg ggtcagctcg tcgacgtcgc
      541 caagctgatc gacgcgtact acacgcggca gcccgatccg gcgacgccgg ccgagcgggt
      601 ggcgttcggg acatccggcc atcgcggctc gtcgttcgac agcaccttca acgaggccca
      661 tgtgctggcg atcagccagg cgatttgcct ctatcgccaa cgcgagcgca tctccggccc
      721 gttgttcatc ggctgcgata cccatgccct gtcgcggccc gccttcgaaa gcgccctgga
      781 agtcctggcg gcgaacggcg tcgaggtcat gatctccaag gacggggaat acaccccgac
      841 gccggcaatt tcccaggcca tcctcgtcca caatcgcggg cgccgggacg gcttggccga
      901 tggcatcgtc atcacgccgt cgcacaatcc gcccgaggat ggcggcttca agtacaatcc
      961 gccgaacggc ggtccagccg acaccgatgt gaccggctgg atccagaacc aggccaacgg
     1021 gatcctcgag gcgggcctcg cggacgtgaa gcgtctgccc ttcgagcagg cccagcgtgc
     1081 cgcaaccacc cgcgcgtacg atttcctcga gacctacacc gccgacctcg gcaatgtgat
     1141 cgacttcgat gcgatccgcg cctccggcat ccgcatgggg gtcgatccgc tgggcggtgc
     1201 cggcgtccat tattgggcgc ggatcgccga acgctaccgc atcgacctca ccgtggtcag
     1261 cgagcaggtc gatcccacgt tcagcttcat gaccctggac tgggacggcc gcattcgcat
     1321 ggacccgtcc tcgtcatatg ccatgcgacg gttgattggg ctgaaggaca aatacgacat
     1381 cgcctttgcc tgcgacaccg atcatgaccg gcacggcatc gtggtgccgg gcgtcggcct
     1441 gatgcagccg aacaattttc tcagcgtcgc catcgattac ctgtttcgcc atcggcccga
     1501 gtggaaggcg gatgcagcgg tcggcaagac cgtggtgagc agcgccatga tcgaccgggt
     1561 ggccgcgcgc ctcggccgca agctctacga ggttccggtc ggcttcaaat ggttcgtcga
     1621 cgggctgttc gacggttcgt tgggattcgg cggcgaggaa agcgccggag cgtccttcct
     1681 tcggcgcgac ggtaccgtct ggacgaccga caaggacggc attaccgccg ccctgctctc
     1741 ggccgagatc accgcgcggg tcgggcggaa tcccggcctg ctctatcgcg acatcacgcg
     1801 cgatctcggt gaagcgactg ctgcccgcat cgacgctccg gcgagccccg cgcagaagcg
     1861 gaaactggcg gcgctgtcgc cgcagcaggt ccggatcaag gagatggccg gcgagccggt
     1921 caagagcgtg ctgacgcgcg cccctggaaa cgacgccgcc atcggcggga tcaaggtcgt
     1981 cgcggaaaac ggctggttcg ccgcgcgccc ctccggtacc gaagacgtct acaagatcta
     2041 cgccgagagt ttccgcggcg aggagcattt gcgggctctc ctgcatgagg cgcaggtcat
     2101 tgtcgatgcc gcgctggcga cagaaggcgg gacctaggaa ggcgcggcag gccatcgtgg
     2161 cgaaactcgc cgagctcgcc gactggctgg ccgattcagg cctgcgcaac ctgccactgg
     2221 aggagatggt cgacggcttc gcgcggcggc tgaacgacat gggcgtgccc gtggcgcgca
     2281 tcttcgtcgg catgaacacg cttcatccga tggtgcggat acgcagcctg atctgggacc
     2341 gcgcgacggg gccggccacg catttcgagt ttcgccatgc cgatatcgac gcgcccatcc
     2401 tgcaggagag ccccttcgcg ccgatgctgc gcgacggcgt cggggagcgc cgtcgccgcg
     2461 tcgacgatcc gttggtagtc ggcgaagccc cggtgttcga ggagctgcat gcagcaggca
     2521 tgacggagtg gctgggccgc gtcttcccgt tcggcgagct ggtgccgcag atcggcggtc
     2581 cgcacgaggc cgagcatgtc gagcggcagt ggctcgtctg ctcgctgacc accgaccgcc
     2641 caggcggcta tctcgacgcc gacacagcgg tgctgcggca ggtgctgcca gtgttcgctc
     2701 tcgccgtgaa ggccgtggcc atccgcgcca tcggtcatgg gctgctggcc gcctatctcg
     2761 gcgacgatcc ggcgagccga gtcttcgccg gcaccgtgca gcgtggcgag gtgcagagcg
     2821 tcgaggcgat cgtgttcttc accgacctgc gcggcttcac cgcgctcgcc gataccatgg
     2881 ccggccagga gctgatcgcc ctgctcgacg agtgcttcga atgcatggtg gcgcccgtcg
     2941 tgaagcgcgg cggcgaggtg ctgaaattca tgggcgacgg cctgctcgct gccttcgccg
     3001 ccggttcggt caatcgcgcc gcggcctgca gcgccgcact cgacgcggcg atcgaggcgc
     3061 tcgccctgat ggaggcgttg aatgcaaggc ggcaggccga gggacggcgg acgaccgggc
     3121 tcgatctcgt actccacatc ggtacggtgc agtacggtaa cgtcggcact gcccagcgcc
     3181 tcgacttcac ggtgatcggg ccggcggtca acgaggcctc gcgcatcgag aaattgtgtg
     3241 aaccgctcgg acaaaacctc ctgatctcgc accagttcgc cgaggcggct gtttcgtgcc
     3301 gttcccgcct ggtctcgctc ggccgccacc gcctgcgcgg cgtgagggaa gagacagagt
     3361 tgttcgcgct tttgtcatcc tgagcgcagc gaaggatctc atgcccgtgg caagcggcga
     3421 tgaagtcctt cgcttgcgct tcagcgcggg ggttaccccg cgcgagacga cagaaaagtg
     3481 aaggcgtttg acgtctactt cccgtacacc gtgctctcga acgcatagaa cagcggcagc
     3541 gccttggtgt cggcgaacgg caggacctgg gtgagataaa cgccgcccac gccctttttc
     3601 tggtcgatcc agaaataggt attggccagc cccgcccagg cgagcccgcc ggccgagcgt
     3661 cccgtgggcg cctcttcgtt attgatcatg aagctaaggc cccactgctt gtccatgccg
     3721 gggaagaact ccgcgtcgtt ggagaagggc ggcgccgcgg tcttgagcat ggtgaccttc
     3781 gactcgccca tggcgttctt ggacatcagc gccacggtct cgggtttcag caccgcctcg
     3841 ccgcggtccg acttgccctg gttcagcatc atgcgcacga acctgagata gtcgccggcg
     3901 gtgctgtaga ggccgccgcc gcccatctcg aactcgggtt cctgcggcag ctcgagcgcg
     3961 gtgtcgggcg tcagcgaact gtcgggaccg cgatgatgaa tcttggccag gcgcttcctc
     4021 atgctctcgt tgatgaagaa gccggtgctg tccatgccga gcggtcccag gatgttgtcg
     4081 cgcatatatt ggccgagctt cttgccgccg accgcctcga ccatcttgcc ggcccagtcg
     4141 atgttgatgc cgtagaacca gcgctcgccg ggatcgaaca ggagcggggt ggtcagcgcc
     4201 ttgttctggc agctgatgac gcccggcacc tccatcgcct ccatgtattt gccgacctcc
     4261 gggctccaga tgtcgtagcc gaagcccgcg gtatgagtca gcagatggcg caaggtgatg
     4321 tcgcgcttgg gtttgcgcgt cctgggcttg ccggcggcgt cgaagccgtc gagcacgccg
     4381 acctcgccca gctggggaac caccgccttg gctggcgcgt cgagctcgag cttgccgcgc
     4441 tcgacgagct gcatggccgc cgccccggtg atcgccttgg tcatggaggc gatccacacc
     4501 acggtgtcgg gcgtcatgtc ggcgggctcg cccagcacgc gcttgccgaa gcccgcctcg
     4561 taggtcatgc ccttggcgtc ggtcgccgcg gcagtcacgc ccggcacgtc gcccttgctc
     4621 accgcctcct tcaggatcct gtcggcctgg gctttcatgg cattcctccg ggtaaattgg
     4681 ctttcc
//
LOCUS       DASWGA010000355         5012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_293755, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000355 DASWGA010000000
VERSION     DASWGA010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5012
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293755"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..496
                     /gene="clpS"
                     /locus_tag="VF991_08505"
     CDS             191..496
                     /gene="clpS"
                     /locus_tag="VF991_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEX9556521.1"
                     /translation="MSDIDVKPDTIAKPKIEQPRLYKVILINDDYTPREFVVAVLMAV
                     FHMSEDQAYRVMMTAHQRGVCVVAAFTREIAESKATEGTDAGRQAGHPLEFTTEPEE"
     gene            complement(558..983)
                     /locus_tag="VF991_08510"
     CDS             complement(558..983)
                     /locus_tag="VF991_08510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018431058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX9556522.1"
                     /translation="MPGLTLAQANKIVETALAKARTMKIKPLAVAVLDEAGHVKSLQR
                     EDGASMFRCDVAIGKAWASVGMGVASRTLLQRAKDNPHFFGALSATAQGKFLPQTGAV
                     VIKDAAGNVLGAAGASGGTGDEDEAVCIAGVEAAGLTTG"
     gene            1095..2144
                     /locus_tag="VF991_08515"
     CDS             1095..2144
                     /locus_tag="VF991_08515"
                     /inference="COORDINATES: protein motif:HMM:NF037995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9556523.1"
                     /translation="MLNRLLTGLALATAVAGGAAAQDLPKSQFKVIGLNSPTPVSIHD
                     ELPFWRKTIPEASKGAITADITPLDQMGIDDKTMLRLLKLGVMDFAAMDISKMAGDDP
                     RFEGCDLAGLTLDPDKARAACNAYRAVIDRQMQKNWNAKLLAFGGNTPQVFWCREVIG
                     GLDSFKGKKIRVFNNTMRDFLGGVGGTAVSMAFAEVVPALNNGVVDCAVTGSLSGNTA
                     GWAEVTKSIYPMSLGWSINVLAVNLDSWKRLDPKTQAFLLEQVKTYEDKMWATVKTTT
                     AEADNCNTGKQPCTMGKLAKMTIVPVKPEEAETHKKLVEGAVLAGWAKRCGGECAKEW
                     NETVGKTLGLKAPTP"
     gene            2161..2745
                     /locus_tag="VF991_08520"
     CDS             2161..2745
                     /locus_tag="VF991_08520"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX9556524.1"
                     /translation="MSGVRRFALWGLWFGGALVLLAAVLIGIDVLMRKFLARSIGGAD
                     ELAGYSLAIGTAWGLGATLLDRAHIRIDSLYVLFPQKLRLALDLVALILLIGFFGLVA
                     WHGLGVVSQSWTSASRSQSALETPTVIPQVLWIAGLATFVAIGLLLLFDALRILASGD
                     LRRAAGLISTRSAEEEVEDEIRDLKGRQTRDGDD"
     gene            2747..4033
                     /locus_tag="VF991_08525"
     CDS             2747..4033
                     /locus_tag="VF991_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX9556525.1"
                     /translation="MLIVTLAILIGLLALAIPVAAGLGILGLSLSSLYSKLPLSLAMG
                     EIAWGTSNNFLLVAIPFFVLLGEILLRSGMAERMYNALVLWVPWLPGGLMHSNIAACA
                     MFAATSGSSVATAATIGTVALGEVEKRGYSERLFLGTIAAGGTLGILIPPSINMIVYG
                     VLTETSIPKLYLAGFIPGIILASLFSLTVLIICLIRPELGGKPTETSWRQRIAALPDL
                     LPPLIIFLAVIGSIYAGWATATESAALGVIAAIGIAAWNRRLTLRTLLNAFEGTMRTT
                     AMIMAILLAAYFLNFVITSIGLTGQVNGFITSLGLTKLQLLFAVVLFYFILGMFMETL
                     SMMVATVPIIAPIMIKAGYDPVWFGIMIIILMELAMITPPVGINLYVVQGLRKRGRID
                     DVIIGASPFVITMLLMLAILSVWPQIALWLPQLAAS"
     gene            complement(4030..>5012)
                     /locus_tag="VF991_08530"
     CDS             complement(4030..>5012)
                     /locus_tag="VF991_08530"
                     /inference="COORDINATES: protein motif:HMM:NF039581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9556526.1"
                     /translation="DKGGTVPTITDANVLLGYINAMHLVGGALKLNAEKARTAFAEKI
                     AQPLGMPLERAAYGAHLIVASNMIRAIKAVSTERGRDPRDFALFAFGGNGPLFAAGMA
                     AALGIGRVVVPPSAGLFSSFGLLYADVEHHYARTFRRLLRQADLGEIAAAWDALARQA
                     SDQLAAEGFTGNRARLKRSAALHYKGQSYELTVPVPDGPIDASMGVHLEQAFGAEHER
                     TYGHRAGPDEPVELVSIQLIGSGLREGGGVPQRVVSSRSEPVAQSLRPAYFGDEHGWM
                     ETPVLSRADLASGRAGPLIVEEYDATCVVPPGAHAERDVAGNIVIRVAAN"
BASE COUNT          824 a         1640 c         1665 g          883 t
ORIGIN      
        1 tggtgaccgt ccacccgtcg tcgatcctgc ggatgcccga ccaggcggcc cgccacgccg
       61 cctttgccgc cctggtgaag gacctcaagg ctgccgtgaa gcaggcggcc gcctgacgaa
      121 ggcgttgcaa tgcaacgaag actcgccaaa ctatggagct ggcatcgacc aggagcgcag
      181 gagacggccg atgagcgata tcgacgtcaa acccgatacc atcgccaagc cgaagatcga
      241 acagcctcga ctctataagg tgatcctgat caacgacgac tatacgccgc gcgagttcgt
      301 cgtcgccgtc ctgatggctg tcttccacat gagcgaggac caggcctatc gcgtgatgat
      361 gaccgcgcac cagcgcggcg tctgcgtggt cgccgccttc acccgcgaga tcgccgaaag
      421 caaggccacc gaaggcaccg acgccggccg ccaggccggc catccgctgg aattcacgac
      481 cgagccggag gagtagccgg agcgcgaacc tcctcaggtc ggggtaaccc ccgacctgag
      541 gaggtccgcg ctccaagcta tcccgtcgtc aatcccgccg cctcgacgcc ggcgatgcac
      601 accgcctcgt cttcatcgcc agtgccgccg ctcgccccgg ccgcacccag cacgttgccg
      661 gcggcgtcct tgatcacgac ggcgccggtc tgtggcagga acttgccttg cgcggtggcg
      721 ctgagcgcgc cgaagaagtg cgggttgtcc ttggcccgct gcagcagggt gcggctcgcc
      781 acgcccatgc cgaccgaagc ccatgccttg ccgatggcga cgtcgcagcg gaacatgctg
      841 gcgccgtcct cgcgctgcag cgacttgacg tggcccgcct cgtcgagcac ggcgacggcg
      901 agcggcttga tcttcatggt gcgcgccttg gccagcgcag tttcgacgat cttgttggct
      961 tgggcgagag tgagtccggg catgctcggt cctgggtgag gttgggcgac gacgcgcagt
     1021 tgagcataat ttcgcatggc atgcattttg ctgctaacat ctgcgggtat tcggggaagg
     1081 ggaggaagct acacatgctg aaccggttat tgacggggtt ggcgctggcg acggctgtcg
     1141 ccggcggtgc cgccgcacaa gatctgccga agagccagtt caaggtcatt ggcctcaaca
     1201 gtccgacgcc ggtgtcgatc cacgacgagt tgccgttctg gcgcaagacg atcccggaag
     1261 catcgaaggg ggccatcacg gccgacatca caccgctcga ccagatgggc atcgacgaca
     1321 agaccatgct gcgtctgctc aagctcggcg tcatggactt cgccgccatg gacatctcca
     1381 agatggccgg cgacgaccca cgcttcgagg gctgcgatct ggccggactg acgctcgatc
     1441 ccgacaaggc gcgcgcggcc tgtaacgcct accgcgcggt gatcgaccgc cagatgcaga
     1501 agaactggaa tgccaagttg ctggcgttcg gcggcaacac gccccaggtc ttctggtgcc
     1561 gtgaggtgat cggcgggctg gacagcttca agggcaagaa gatccgcgtg ttcaacaaca
     1621 cgatgcgcga tttcctgggc ggcgtcggtg gcacggcggt cagcatggcg tttgccgaag
     1681 tcgtgccggc gctgaacaac ggcgtggtcg attgcgccgt gaccggcagc ctgtcgggca
     1741 acacggccgg ctgggcggag gtcaccaagt cgatctatcc gatgtcgctc ggctggagca
     1801 tcaacgtgct ggcggtcaat ctcgacagct ggaagcggct cgatcccaaa acccaggcct
     1861 tcctgctcga gcaggtcaag acctacgaag acaagatgtg ggcgaccgtc aagacgacga
     1921 ccgccgaagc cgacaactgc aacaccggca agcagccctg caccatgggc aagctcgcca
     1981 agatgacgat cgtgccggtg aagccggagg aggccgaaac gcacaagaag ctggtcgagg
     2041 gcgccgtgct ggcaggctgg gccaagcgtt gcggcggcga gtgcgccaag gagtggaacg
     2101 aaaccgtcgg caagacgctc ggcctgaagg cgccaacgcc ataagcccca ggacgacccg
     2161 atgagcggcg tgcgtcgctt cgccctgtgg ggcctgtggt tcggcggcgc gctggttctt
     2221 ctggcggcgg tgctgatcgg catcgacgta ctgatgcgca agttcctcgc ccgctcgatc
     2281 ggcggcgccg acgagcttgc cggctactcg cttgccatcg gaacagcgtg gggtctcggc
     2341 gcgacgctgc tcgatcgcgc acacatccgc atcgattcgc tttacgtgct cttcccgcag
     2401 aagctgcgcc tggctctcga tcttgtggcg ctgatcctgc tcatcggctt cttcggcttg
     2461 gtcgcctggc atggattggg cgtcgtctcg cagtcctgga cttcggcgtc gcgcagccaa
     2521 tccgcactcg aaacgccgac ggtgatcccg caagtgctgt ggatcgcggg cctggccacg
     2581 ttcgtcgcga tcggcctgct gctgctgttc gatgcgctca ggatcctggc ctcgggtgat
     2641 ctgcggcgcg cggcgggcct gatcagcacg cgctccgccg aggaggaggt cgaggacgag
     2701 atccgcgatt tgaagggccg tcaaacgcgc gacggggacg actgacgtgc tgatcgtcac
     2761 gctcgccatc ctgatcggtc tgctggcgct cgcgattccg gtcgcggccg gcctcggcat
     2821 tctcggcctc tcgctgtcga gcctctattc gaagctgccg ctttcgctgg cgatgggcga
     2881 gattgcctgg ggcacgtcga acaatttcct gctcgtcgcg attccgttct tcgtgctgct
     2941 cggcgagatc ctgctgcggt cgggaatggc cgagcgcatg tacaacgcgc tggtgctctg
     3001 ggtgccatgg ctgcccggcg gcctgatgca ttccaacatc gcggcttgcg cgatgttcgc
     3061 ggcaacctcg ggctcgagcg tggcgactgc ggcgacgatc ggcacggtcg ccctgggcga
     3121 ggtcgagaag cgcggctatt ccgagcggct ctttctcggc accatcgccg ccggcggcac
     3181 gctcggcatc ctgatcccgc cgtccatcaa catgatcgtc tacggcgttc tcaccgagac
     3241 gtcgattccc aagctctatc tcgcgggatt cattcccggc atcattctcg cgagcctctt
     3301 cagcttgacg gtcctcatca tttgcctgat ccggccggag ctgggcggca agccgacgga
     3361 gacaagctgg cgacagcgca tcgcggcgtt gcccgacctg ctgccgccgc tgatcatctt
     3421 ccttgccgtg atcggctcga tctacgccgg ctgggcgacg gcaaccgagt cggcggcgct
     3481 cggcgtgatc gccgccatcg gcattgcggc atggaaccgc cgactcacgc tgcgaacgct
     3541 gctcaacgcc ttcgaaggca ccatgcgcac gactgccatg atcatggcga tcctgctcgc
     3601 cgcctatttc ctcaatttcg tgatcacctc gatcggcctc accggacagg tcaacggctt
     3661 catcacgagt ctcgggctca cgaaacttca gctgcttttc gcggttgtgc tcttctactt
     3721 catcctcggc atgttcatgg agacactgtc gatgatggtg gcgacggtac cgatcatcgc
     3781 gcccatcatg atcaaggcag gctacgatcc ggtctggttc ggcatcatga tcatcatcct
     3841 gatggagctg gcgatgatca cgccaccggt cggcatcaac ctctatgtcg tgcagggcct
     3901 gcgcaagcgc ggcaggatcg acgatgtcat catcggcgcc tcgccgttcg tgatcaccat
     3961 gctgctgatg ctggcgatcc tgtcggtctg gccgcagatc gcgctgtggc tgccgcaact
     4021 ggcggccagc tagttcgcag ccaccctgat gacgatgttg ccggcgacat cgcgttcggc
     4081 gtgggcgccg ggcggcacga cgcaggtcgc gtcgtattcc tcgacgatca gcggtccggc
     4141 gcggccggaa gcaagatcgg cgcgactcaa gacgggtgtc tccatccagc cgtgctcatc
     4201 gccgaaatag gcgggccgca ggctttgcgc cacgggctcc gagcggctcg acacgacgcg
     4261 ctggggcacg ccgccgcctt cgcgcaggcc cgagccgatg agctggatcg acaccagttc
     4321 gaccggctcg tcggggccgg cgcgatggcc gtaggtccgc tcgtgttctg cgccgaacgc
     4381 ctgttcgagg tggacgccca tgctcgcatc gatcgggccg tccggcaccg gcacggtcaa
     4441 ttcgtagctc tggcccttgt agtgcagggc cgcggaccgc ttgagccggg cgcggttgcc
     4501 ggtaaagccc tcggcggcga gctggtcgct cgcctggcgc gccagcgcgt cccaggccgc
     4561 ggcgatctcg ccaagatcgg cttggcgcag cagccgacgg aaggtgcggg cgtagtggtg
     4621 ctcgacgtcg gcatagagca gcccgaacga ggagaagagc ccggccgacg gcggcaccac
     4681 gacgcggccg atgccgagcg cggcggccat gccggcggcg aacagcggac cgttgccgcc
     4741 gaaggcgaac agggcgaagt cgcgcgggtc gcggccgcgc tcggtcgaca ccgccttgat
     4801 ggcgcggatc atgttggagg cgacgatcag gtgcgcgccg taggccgccc gctcgagcgg
     4861 catgccaagc ggctgggcga tcttctcggc gaaggcggtg cgggcctttt cggcattgag
     4921 cttgagcgcg ccgccgacga ggtgcatggc attgatgtag cccagcagca cattggcgtc
     4981 ggtgatcgtc ggcaccgtgc cgcccttgtc gt
//
LOCUS       DASWGA010000356         2837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1941756, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000356 DASWGA010000000
VERSION     DASWGA010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1941756"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VF991_08535"
     CDS             <1..361
                     /locus_tag="VF991_08535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9556527.1"
                     /translation="GQKTRVALAKALINSPEVLLLDEPTASLDPDTADWVRGYLKDYQ
                     HETHATIMLASHNMSEVERLCDDVILLQAGRVFERGSPRELIERFGREDMEEVFLDMA
                     RGRGRGLDALGKKEAAS"
     gene            358..1155
                     /locus_tag="VF991_08540"
     CDS             358..1155
                     /locus_tag="VF991_08540"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556528.1"
                     /translation="MSGSAERIYALVMRHIYIWRSSIMRLVDSIYWPAVQMVMWGFMT
                     QYLLPQASFVAQAAGVLLSGLLLWEVVVRGNLSLSIAFLEEMWSRNLGHLFVSPIRSW
                     EMATGIIVVALLRTLLGLIPVSLMAWAFFGYSVYALGLPLVAFFAILQMFSWSIGLAM
                     SGMIMRVGQSAESFAWAAVFILMPVSGVYYPVSVLPHWLQVISWGLPPAYVFEGMRAI
                     LAEKTVHWDMLAIAFGLSAVYLVVGFQIFQWFFRLSRRAGTLLGQGE"
     gene            1152..1886
                     /locus_tag="VF991_08545"
     CDS             1152..1886
                     /locus_tag="VF991_08545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556529.1"
                     /translation="MRIVAWNCNMALERKIDVLLDLAPDIAVVCECAEPERLRLRSKL
                     SWMHNEPIWIGRNPHKGLAVFTFNGYAARLAQAYHPSLRYVAPVHISGPTSCNLLAVW
                     AQNASAGPIRKHQLGPLRRALSRYKGFLDERPAVIAGDLNSNTIWDKPGWRINHSSKV
                     RILEESFGLVSAYHAIRGEAHGKESEPTLYWRDRTKDGPTYHIDYVFLPTAWIGKVRH
                     LSIGTFEAWCGAGLSDHVPVIVDIDV"
     gene            1909..2280
                     /locus_tag="VF991_08550"
     CDS             1909..2280
                     /locus_tag="VF991_08550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556530.1"
                     /translation="MVKVFVVSVSIALAVAACANPQDLPKPDIWTVNYNVPFDAMVAC
                     LAAPPAGAFTTYAPGYMQDGTARIVFIPRDTPQAQSAYVVTRMVGNVSQVSWRRFGSV
                     SQGLDWLDAEARTRANRCGNT"
     gene            complement(2281..>2837)
                     /locus_tag="VF991_08555"
     CDS             complement(2281..>2837)
                     /locus_tag="VF991_08555"
                     /inference="COORDINATES: protein motif:HMM:NF015376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HEX9556531.1"
                     /translation="LYIGDIGQPRGGPMSFGHASHQVGLDVDIWFERQPGPRRAPAER
                     ESPKLRSLVRADDGGIDEAVFAGQHVTLLRLAATSPGVDRIFVNKWIKQRLCQTVTGN
                     RAWLNKLVVWVGHDEHFHVRLHCPPGNLQCQPQAGYYADDGCGEPLELWFTRPPVRLP
                     PPDAPQAPFRPKLPVACSAVLKAP"
BASE COUNT          453 a          915 c          948 g          521 t
ORIGIN      
        1 cggacagaag acccgcgtgg cgctcgccaa agcgctgatc aacagtcccg aggttctgct
       61 gctcgacgaa ccgacggcct cgctcgatcc cgacaccgcc gactgggtgc gcggctacct
      121 caaggactac cagcacgaga ctcatgccac gatcatgctc gcctcgcaca acatgagcga
      181 ggtcgagcgg ttgtgcgacg acgtgatcct gctacaggcc ggccgagtct tcgagcgcgg
      241 cagcccgcgc gagttgatcg aacgcttcgg tcgcgaagac atggaagagg tgttcctgga
      301 catggcgcgc ggccgcggcc gcggcctcga cgcgcttggc aaaaaggagg cggcgtcgtg
      361 agtggttcgg ccgagcggat ctatgccctg gtgatgcgcc acatctacat ctggcgcagc
      421 tcgatcatgc ggctcgtcga ttccatctat tggcccgccg tgcagatggt gatgtgggga
      481 ttcatgaccc agtacctgct gccgcaggcc tcgttcgtcg cccaggcggc gggcgtgctg
      541 ctgtcggggc ttctgctgtg ggaggtcgtg gtgcgcggca acctctcgct ctccatcgcc
      601 ttcctcgagg agatgtggtc gcgcaatctc ggccacctgt tcgtgagccc gatccgctcc
      661 tgggagatgg cgacgggcat catcgtcgta gccctgttgc gcacgttgct gggcctgatc
      721 ccggtgtcgc tgatggcgtg ggccttcttc ggctattcgg tctacgcgct cggcctgccg
      781 ctggtcgcct ttttcgccat cctgcagatg ttctcctggt cgatcgggct ggccatgtcg
      841 ggcatgatca tgcgggtcgg ccagagcgcc gaaagcttcg cctgggccgc cgtcttcatc
      901 ctgatgccgg tgagcggcgt ctactatccg gtgtcggtgc tgccgcactg gctgcaggtc
      961 atctcctggg gtctgccgcc ggcctacgtc ttcgaaggca tgcgtgccat cctggccgag
     1021 aagacggtgc actgggacat gctcgccatc gcattcggcc tgtcggcggt ctacctggtc
     1081 gtgggcttcc agatcttcca atggttcttc cgcctgtcgc gccgcgccgg gacgctgttg
     1141 gggcagggtg aatgaggatc gtcgcctgga actgcaacat ggcgctcgag cgcaagatcg
     1201 acgtgttgct cgatctggcg cccgacatcg cggtggtctg cgagtgcgcg gagcccgagc
     1261 gcctgcggct gcgatcgaaa ttgtcctgga tgcacaacga gccgatatgg atcggacgca
     1321 acccgcacaa gggcctcgcg gtcttcacct tcaacggcta tgcggcgcgg ctcgcacagg
     1381 cttatcatcc gtcgttacgc tatgtcgcgc cggtccacat cagcggaccc acctcatgta
     1441 atctgctggc ggtgtgggcg cagaacgcca gcgccggccc catccgcaag catcagttgg
     1501 gtccgctgcg tcgcgcgttg tcacgctaca agggttttct cgacgagcgg ccggccgtga
     1561 tcgcgggcga cctcaacagc aacaccatct gggacaagcc gggctggcgc atcaaccatt
     1621 cgagcaaggt gcggatcctc gaggaaagct tcggcctggt cagcgcctac cacgccatcc
     1681 gcggcgaggc gcacggcaag gagagcgaac ccacgctcta ttggcgcgac cgcaccaagg
     1741 atgggccgac ctaccacatc gattatgtct tcctgccgac ggcctggatc ggcaaagtaa
     1801 ggcatctcag catcggcacc ttcgaggcct ggtgcggcgc ggggctgagc gatcatgtgc
     1861 cggtgatcgt cgacatagat gtctgacagg gcgtccagga ggagagtgat ggtgaaggtc
     1921 tttgtcgtgt ccgtctcgat cgcgttggcc gtggccgcct gcgccaaccc gcaagacctg
     1981 cccaagcccg acatctggac ggtcaactac aatgtgccgt tcgatgcgat ggtcgcttgt
     2041 cttgccgcgc cgccggccgg cgcgttcacc acttatgcgc cgggctatat gcaggacggc
     2101 acggcaagga tcgtcttcat cccgcgcgac acgccgcagg cgcagtcggc gtatgtcgtg
     2161 acccgcatgg tgggcaatgt cagccaggtc agctggcgac gcttcgggag cgtcagccag
     2221 ggattggact ggctcgatgc cgaggcgcgc acgcgggcca atcgttgcgg caacacctga
     2281 tcagggtgcc ttgagcaccg ccgagcaggc caccggcagc ttgggccgaa acggagcctg
     2341 cggcgcgtcg ggcggcggca agcggaccgg cggccgcgtg aaccagagtt cgagcggctc
     2401 gccgcatccg tcgtcagcat agtagccggc ctgcggctgg cactgcaggt tgccgggcgg
     2461 acaatggagg cggacgtgga aatgctcgtc gtggccgacc cacaccacga gcttgttgag
     2521 ccacgcccga ttgccggtga ccgtctggca gagccgctgc ttgatccatt tgttcacgaa
     2581 tatgcggtcg actccggggg aggtcgcagc caggcgcagc agcgtcacgt gctggccggc
     2641 gaacaccgcc tcgtcgatgc cgccatcgtc ggcccgcacc agcgaacgca gtttcggact
     2701 ctcgcgttcg gccggcgccc gccgcgggcc gggctggcgc tcgaaccaga tgtcgacgtc
     2761 gagcccgacc tggtggctgg catggccgaa gctcatcgga ccgccgcgcg gctggccgat
     2821 atcgccgata taaagcg
//
LOCUS       DASWGA010000357         4046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1303609, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000357 DASWGA010000000
VERSION     DASWGA010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4046
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1303609"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VF991_08560"
     CDS             <1..772
                     /locus_tag="VF991_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9556532.1"
                     /translation="RRGKVVLTTKFGQTQQPGGANGVDGSPAYVKAACEASLKRLGVD
                     VIDLYYQHRVDPAVPIEDTVGAMGELVKAGKVRALGLSEAKPETIRRAHKVHPLAAVQ
                     SEYSLLYRVDAEETLETTRALGISFVAYSPLGRSLLTGAVRQVSDIPEGDGRGRHPRF
                     AAENLARNLAQVAAIEAVAREKGFKPGQVALAWLLAQGPDIVPIPGTKRAERIDENLA
                     ALDVGLSADDVARLSSALPPGAAAGPRYPEAGMKAVYI"
     gene            897..3077
                     /locus_tag="VF991_08565"
     CDS             897..3077
                     /locus_tag="VF991_08565"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9556533.1"
                     /translation="MVPLSIAPLRSQSVGTASGQEITDWIVIAPDGEITLGLSQPEVG
                     QGSYTVLPQILADELDADWQRIRVRFVTGRDAYKIAFKNEPPVQKEGASMSTTILFPR
                     LRTAGAAAREVLVRAAADRWKAAVAQCRTEKGVVIGPNGERLSYGALAGDAAKLPLNA
                     APALKDRAEFTLIGQSLPRLDTRAKSTGSATFGIDVVVPDMLHGAIRSAPTFTGSLTA
                     VRNEGEVLKMPGVRAVVRLPAVHVANEEPGSQHPGLAQGTRHNAVCVVADRFWQAKRA
                     ADALDLAFDPGAGGDLSTAGIDGLLHKALDADKGVTAVEVGRPLEILVERSASVIERR
                     FVLPHIAHAPLEPVNATAFYKDGAVEVWGPIQAVAACQDAIAASLGIKSEAIKVNVTF
                     LGGSFSRKIVPDYVVQAVHASKAVGRPVKLLRTREEDLRHGIFRVNAGGRFRAVLDDK
                     GYPLAVQARVVGQSLFGATRKSWLDQTPEGAWDESMVDGIYNQDYRLPNFLVETIDTP
                     LPVPVYFMRSVGSTASVFFWESFISELAYRAGIDQYDYRRTLLADNPLALRVLDAVAE
                     AARWKTPGAVRGIAYNCYVGRGGRFRTYVAQVVEFVPVGDRLAVKRVFCAVDPGLMVN
                     PNTLIAQIQGGIGFALTTALYSRITFAKGGAEQTNFLDYPLLAIDEMPEIVPVVLPSD
                     RPPQGFGEVVLAPLAPAIAQALLQATGRRIDVMPLPAAAFRRQA"
     gene            3074..3538
                     /locus_tag="VF991_08570"
     CDS             3074..3538
                     /locus_tag="VF991_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9556534.1"
                     /translation="MSALSLRINGTTRSVDVDGDTPLLWVLRDDLGLTGTKFGCGAAL
                     CGACTVLVGDVPTRSCSLPVSAVGSGEITTIEGVSGPEAMAVQRAWIARDVPQCGYCQ
                     SGQIISAIALLKAIRKPTDHDIDLAMAGNLCRCATYVRIRAAIHDAARELGG"
     gene            3540..>4046
                     /locus_tag="VF991_08575"
     CDS             3540..>4046
                     /locus_tag="VF991_08575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016554744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Isoquinoline 1-oxidoreductase subunit"
                     /protein_id="HEX9556535.1"
                     /translation="MTARLLAVIGVFACIATAAAQQPDQAARSIALFREAGKVLQHPR
                     CLNCHPAGDRPSQTDRMTPHRPMVVRGADGHGAPGLPCNACHHAANYDEAGVPGHPLW
                     HLAPASMAWAGRSLGEICRQIKDPVRNGGRDMAALLRHMSEDSLVGWAWAPGGKRTPA
                     PGTQAEFGA"
BASE COUNT          603 a         1405 c         1396 g          642 t
ORIGIN      
        1 ccggcggggc aaggtcgtgc tgactaccaa gttcggtcag acccagcagc cgggcggcgc
       61 caatggcgtc gacggcagcc cggcctacgt gaaggccgcc tgcgaggcga gcctcaagag
      121 gctcggcgtc gatgtgatcg acctctacta ccagcaccgt gtcgatcccg cggtgccgat
      181 cgaggatacg gtgggcgcga tgggcgagct ggtgaaggcg ggcaaggtgc gggcgctcgg
      241 cctgagcgag gccaagccgg aaaccatccg ccgcgcgcac aaggtgcatc cgctcgcggc
      301 cgtgcagagc gagtactcgc tgctctatcg cgtcgatgcc gaggagacgc tcgagacgac
      361 gcgcgcgctc ggcatctcct tcgtcgccta ttcgccgctc ggccgcagcc tcttgaccgg
      421 cgccgtgcgg caagtctccg acatccccga aggcgatggc cgcggccgcc acccgcgctt
      481 cgccgccgag aatctggcgc gcaacctggc gcaggtcgct gccatcgaag ccgttgcgcg
      541 cgaaaaaggc tttaagccgg gacaggtggc gctcgcctgg ctgctggcgc aaggcccgga
      601 catcgtgccg atccccggca ccaagcgggc cgagcgcatc gacgaaaacc tggcggcgct
      661 cgatgtcggc ctgtcggccg atgatgtcgc ccggctgtcg tcggccctgc cccccggggc
      721 ggctgccggc ccgcgctatc ccgaagccgg catgaaagcc gtttacatct gagtgggcgg
      781 cgatcgcgag aggtggtccg cgtgaagcgg ctgcagcgtc tcgcaatctg ctctaggctc
      841 gcggtgtgac gcctgctctt tcgcgccgtt ttgtgctcgc cggaaccgcc tctctcgtgg
      901 ttcccctcag catcgcaccg ctgcgcagcc aatcggtcgg caccgccagt ggccaggaaa
      961 tcaccgactg gatcgtgatc gcccctgatg gcgagatcac gcttggcctg tcgcagccgg
     1021 aagtcgggca gggctcctac accgtgctgc cgcagatcct ggccgatgag ctcgacgccg
     1081 attggcagcg catcagggtg cgcttcgtca cgggccgcga tgcctacaag atcgccttca
     1141 agaacgagcc gccggtccag aaggaaggcg cctcgatgtc gaccaccatc ctcttcccgc
     1201 gcctgcggac cgccggcgcg gcggcgcggg aggtgctggt gcgcgccgcg gccgatcgct
     1261 ggaaggccgc cgtcgcccag tgccgcaccg agaagggcgt cgtgatcggc ccgaacggcg
     1321 agcgcctgtc ctacggcgcg ctggcgggcg atgccgcgaa gctgccgctc aatgccgcgc
     1381 cggcgctcaa ggatcgcgcc gagttcacgc tgatcggcca gtccctgccg cggctcgaca
     1441 cgcgcgccaa gagcacgggc agcgcgacgt tcggcatcga cgtcgtcgtg cccgacatgc
     1501 tgcacggcgc gatccgctcg gcgcccactt tcaccggctc gctcaccgcc gtccgcaacg
     1561 agggagaggt cctgaagatg ccgggcgtgc gtgccgtcgt gcgcctgccc gccgtccatg
     1621 tcgccaacga ggagccgggc tcgcagcatc cgggcctggc gcagggcacc cggcacaatg
     1681 cggtgtgcgt cgtggccgac cgcttctggc aggccaagcg cgcggccgat gcgctcgatc
     1741 tcgccttcga tcccggcgcc ggcggcgatc tgtcgacggc cgggatcgat ggcctgctgc
     1801 acaaggcgct cgacgctgac aaaggcgtga ccgccgtcga agtcggccgt ccgttggaaa
     1861 tccttgtcga gcggtcggcc tcggtcatcg agcgacgctt cgtgctgccg catatcgcgc
     1921 acgcgccgct cgagccggtc aacgccacgg ctttctacaa ggatggcgcg gtcgaggttt
     1981 ggggtccgat ccaggcggtc gccgcctgcc aggatgcgat cgcggcgtcc ctcggcatca
     2041 agtccgaggc gatcaaggtc aacgtcacct tcctgggcgg cagcttcagc cgcaagatcg
     2101 tgcccgacta tgtcgtgcag gccgtccatg cctccaaggc ggtcggccgg ccggtcaagc
     2161 ttttgcgcac gcgcgaggag gacctgaggc acggcatctt ccgcgtcaat gccggcggcc
     2221 gcttccgcgc cgtgctcgac gacaagggct atccgctggc ggtgcaggct cgcgtcgtcg
     2281 gccagtcgct gttcggcgcc acgcgcaaga gctggctcga ccagacgccg gagggcgcct
     2341 gggacgagag catggtcgac ggcatttata accaggacta tcggctgcct aacttcctgg
     2401 tcgagaccat cgacacgccg ctgcccgtgc cggtctattt catgcgctcc gtcggctcga
     2461 ccgcatcagt gttcttctgg gaaagcttca tctccgaact ggcctatcgc gccggtatcg
     2521 accagtacga ctatcgaaga actctgctgg ccgacaatcc gctggccttg cgggtgcttg
     2581 acgcggtggc cgaggcggca cgctggaaga cgcccggcgc ggtccgcggc atcgcctaca
     2641 attgctatgt cgggcgcggc gggcgcttca ggacttatgt cgcccaggtc gtcgagtttg
     2701 tgccggtcgg cgaccggctg gcagtgaagc gcgtgttctg cgccgtcgat cccggcctga
     2761 tggtcaaccc caacacgctg atcgcccaga tccagggcgg catcggcttt gccctgacga
     2821 cggcgctcta cagccgcatc acctttgcca agggcggcgc cgagcagacc aatttcctcg
     2881 actatcccct gcttgcgatc gacgagatgc cggagatcgt gccggtcgtc ctgccgagcg
     2941 atcggccgcc gcagggcttc ggcgaggtcg tgctggcgcc gctggcgccg gccatcgccc
     3001 aggcgctgct gcaggcaacc ggccggcgca tcgatgtgat gccgctgcct gccgccgcgt
     3061 tcaggagaca ggcatgagcg cgctcagcct tcgcatcaac ggcacgaccc gcagcgtcga
     3121 tgtcgacggc gacacgccgc tgctctgggt attgcgcgac gatctcgggc tcaccggcac
     3181 caaattcggc tgcggcgccg cgctctgtgg tgcctgcacc gttctggtgg gcgacgtgcc
     3241 gacacgttcg tgttcgctgc cggtgtcggc cgtcggcagc ggcgaaatca ccacgatcga
     3301 gggcgtctca ggaccggagg caatggcggt gcagcgtgcc tggatcgcgc gcgacgtgcc
     3361 gcaatgcggc tactgccagt cgggacagat catcagcgcg atcgcgctct tgaaggcgat
     3421 ccgcaaaccg accgaccatg acatcgacct ggcgatggcg ggcaatctct gccgctgcgc
     3481 cacctatgtc cgcatccgcg cggcgatcca tgacgcggcg cgcgagctgg gagggtgaga
     3541 tgacggctcg actgctggca gtgatcggcg tcttcgcctg catcgccacc gcggcggcgc
     3601 agcagcctga tcaggcggcg cgatcgatcg cgctgttccg cgaggccggc aaggtcctgc
     3661 agcatccgcg ctgtctcaac tgccatcccg cgggtgatcg gccgagccag accgaccgca
     3721 tgacgccgca tcggccgatg gtcgtgcgcg gcgccgacgg gcatggcgcg ccgggcctgc
     3781 cgtgcaacgc ctgccatcac gcggcgaact acgacgaggc cggcgtgccc ggccatccgc
     3841 tgtggcatct ggcgccggcg tcgatggcgt gggccggccg ctcgttgggc gagatctgcc
     3901 gtcagatcaa ggatccggtg cggaatggcg ggcgcgacat ggcggccttg ctgcgccata
     3961 tgagcgaaga cagcctggtc ggctgggcct gggcgcccgg cggcaagcgc acgcccgcgc
     4021 ccggcacgca ggccgagttc ggcgca
//
LOCUS       DASWGA010000358         9245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2071702, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000358 DASWGA010000000
VERSION     DASWGA010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9245
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2071702"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="VF991_08580"
     CDS             complement(<1..560)
                     /locus_tag="VF991_08580"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9556536.1"
                     /translation="MPAGAYAARLFADFGADVIKVEPSKGDSNRCFPPLIDGASGWFA
                     YLNYGKKSVTSNKVELEALLRGADVLIDSTGGDHGAYRHLVVIDLSWFGRSGPYRNFK
                     ASDAVCRALAGFVQLIGPAEGPPLTLPDYQSAIMGGLAAFIPAMAALLGQQSRTYEVS
                     VHEATIALAEYQTIEAWATGTPQKRWG"
     gene            complement(602..1591)
                     /locus_tag="VF991_08585"
     CDS             complement(602..1591)
                     /locus_tag="VF991_08585"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9556537.1"
                     /translation="MQFGLFGGARTKRGAGLEDSQGYDSFIEYVSEADRLGFRQLFMV
                     EHHFTGHGQVSASMTVLAYLAAKTRHIRLGTAVVVLPWHNPVLVAEQVATLDLLSGGR
                     VDFGIGKGYRQAEFDGFCIPIAEATERFDEAIEIIRKAWTSNGRFSHHGKRWHYDDVV
                     VEPEPLQRPHPPLWLAAGSHDSVRRAAREGYNLLLDQLAQVDQIIQRIAIFREECGRV
                     GRVYDPNMVATARPLQMFHDESERAAAYETRKRVVSVIGDLARDKLPDRVEDDTAPLL
                     GMPEEVIARLKQLEAGGATNILLVDPNASVGNLRAFAREVMPAFLPTHAAVAE"
     gene            complement(1603..1776)
                     /locus_tag="VF991_08590"
     CDS             complement(1603..1776)
                     /locus_tag="VF991_08590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556538.1"
                     /translation="MVPGQSTRMANWLQHRAGIDFLPMAWRYFAFVVLQFAPEQGRLP
                     STFFRRLVMIEQT"
     gene            1775..2650
                     /locus_tag="VF991_08595"
     CDS             1775..2650
                     /locus_tag="VF991_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018517376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556539.1"
                     /translation="MAVSLDLLMNAVISGLLLGGFYAAVSIGVAIAFGMLDIVNIAHP
                     AFILLGSYIAFIGNTVFGIDPILAAVIMLPAFYLLGMAAYQVYYVAFERRDDQSLRGL
                     SFFFGVLFISEVALVLIFGVDYRTVQAPYIGPSLDLGLFALPLRLLVPFLVSMVMAVG
                     LQLFLSRTFVGRAVQAVAQDQQALRLMAANPTRIKRIAFGLSIATASLAGACLIIYQP
                     VEPSIGREYIGRVFAICVLGGLGSLPGMVIAAMTLGIAESLTSTFFGPSWAPAVAFGI
                     LLVTLAVRPSGILGR"
     gene            2640..3602
                     /locus_tag="VF991_08600"
     CDS             2640..3602
                     /locus_tag="VF991_08600"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556540.1"
                     /translation="MAVSGAAPGLRGVPFTLVLIAVAAAIFAFGRWLDNSYAFVVGYI
                     VVQYMVLGTAWNILGGYTGYVNFGVTAFFAIGAYSTVALHKLVPTLPLPVMIVVSGVL
                     AGLVGLRTGYLTLRLRGVFFSIATLALAVVVQTLITNWDFVGGARGAYVLRPRMAPLI
                     GGEYMQYLFLLMLGLGVIVLATARAIERSALGYGFAAIRDDEAAAEASGVPTLKLKLI
                     ATTLSGGFMGMAGAPLPFQVTYLDPASGFSLNYAVNAIAMPLIGGTGSWLGPVVGAVL
                     VGGLQEYLRVTISSAVNVLVAGVLMVAFVIAAPQGIVGLFQRKR"
     gene            3599..4333
                     /locus_tag="VF991_08605"
     CDS             3599..4333
                     /locus_tag="VF991_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011654659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556541.1"
                     /translation="MTALLQVAGLGKRFGGFVALDAIDLDVQQGERLGLIGPNGSGKS
                     TLVNCVCGTLRNESGSVHFADEALDGLSAHQRTRRGLARSFQLPRPFASLSLAENIRI
                     PILYTVNARPAAALGRAAIDARCLDVLGQVGLAGKAERLPRDLTQIEMRKLELARAMA
                     AEPKLLIADEAMAGLSHGEVDEIIALLIRLNERGVTVIMIEHIMRAVMEFSQRLAVLV
                     AGRKIADGPPKDVVRDPEVVRAYLGE"
     gene            4323..5054
                     /locus_tag="VF991_08610"
     CDS             4323..5054
                     /locus_tag="VF991_08610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556542.1"
                     /translation="MASSLTVANIEAGYGAVRILHDVSLHVGAGETVALLGTNGNGKS
                     TLMKSIMGMVRPSAGRITAVIDGTAHELVGLSTEEIVDLGVGFVPEGRRLFPKLSVTE
                     NLLLGAFRPTARSVIARNLDFCFETFPRLKERSRQLAGSMSGGEQQMLALARALMSAP
                     RILLVDEPSVGLAPLLVSRTIDKIKELKEGYDLIVLMAEQNFTQAIRIADRGYVIVHG
                     KIAFTGDSAEALNNNDLIREFYLGA"
     gene            complement(5160..6416)
                     /locus_tag="VF991_08615"
     CDS             complement(5160..6416)
                     /locus_tag="VF991_08615"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9556543.1"
                     /translation="MRIERRTFNKLALAGAATGFAGAATAQAKPFTIGFGMALTGGLA
                     PNGKAALLAMQIAEEDINARGGILGRPVKLVYYDDQSNPSTVPGLYTKLLDVDKVDIV
                     VSGYATNMIAPAMPIVMQKDRTFFSLLGLAVNSEFHYPRYFSMTPTGGPRPKESFAEG
                     FLEVAMEQNPKPQTLALVGADAEFPRNAMEGVRNICKKVGLKLVYDKNYPPTTADYTP
                     IVRAVAATNPDVFFACSYPPDSVGIIRASSEIGFKPKIYGGGMVGLQATSIKTQLGPL
                     LNGIVVYDFWLPWAGFASDEGRDFVKRYQTKSAAAGVDLLGYYLPPFGYALMQVVEQA
                     VKGAGGTDDAKLAEFTRKNTFKTVVGDVRFNKEGEWETAQVMAVQFQGVKGNDVDQFR
                     DPKTEVILWPTKYKTGNIIYPYDPKK"
     gene            complement(6578..7828)
                     /locus_tag="VF991_08620"
     CDS             complement(6578..7828)
                     /locus_tag="VF991_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9556544.1"
                     /translation="MKGRNISRFEWTPSATLPTKRVSFAGVGYGEMVERARRLAPTLA
                     ERAEACERLRRLPDDTERDLHDAGLFRFAQPARVGGAELDVGIFVDVCAEMARVCPST
                     AWNVGNLASHHWMLGYFPPETQDELWDRSPDVLIATSLAFAGGRGRKVDGGWEVTGRW
                     PLSSGVDNSDWNMLGFMVRERDDGPVVDQRFALAHRSEYEIIDTWHAVGLCGTGSKDV
                     ATKALFVPERRSLSAWAFNGKPHPGSAVNTTPLFKLPLLALGPYVLTGVMLGCAQGAY
                     DLVVGAARKRNATNTGLPVNANPTVQIKVAEASARIDNAEVIMRRACEHAMAVARAGR
                     EPAHDDKVRYRRDAFFSTRLCLEAVDILMGIAGSGGLYTTGSMQRLFRDAHAANAHVM
                     FSPDLQGALFGQHALGVAGPPPLM"
     gene            8024..>9245
                     /locus_tag="VF991_08625"
     CDS             8024..>9245
                     /locus_tag="VF991_08625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556545.1"
                     /translation="MKIPKGCFALLGIVALTVAASGASAQKYGGVLKIQHMDTPPSAS
                     IHEEATVSVAIPFMAVYNNLVIFDQNVARNSFESIVPELATKWTWSSDGKQLAFKLRQ
                     GVMWHDGKPFTAQDVRCTFEMLLGEGKLRRNPRGAWWSNVEKVTADSDFDVTFHLKER
                     QPSLLALLASGYTPIYPCHVPIDTMRRKPVGTGPFKFVELKMNEGVKLTKNTDYWKPG
                     RPYLDGIEYTIIADRSTRMLAFASGKFDMTFPTDLTVPLYKNMRKDAPHAQCTMRGTG
                     VTTNLIVNREVPPFDDPRIRRALALTLDRQAFIDILTEGEGKMGGAMLPPPDGVWGMP
                     PEMVKTIVGYENVAANRDKGRELMKEAGYGPDKRLKVKVSTRNIAPFRDPATILIDHL
                     KHIYVDGELEVIDTA"
BASE COUNT         1512 a         3009 c         3094 g         1630 t
ORIGIN      
        1 ccccagcgct tctgcggcgt gccggtcgcc caggcctcga tggtctggta ctcggcgagc
       61 gcgatggtgg cttcgtgcac gctcacctcg taagtgcggc tttgctggcc gagcagcgcg
      121 gccatggccg gaatgaaggc cgccagcccg cccatgatgg ccgattgata gtcgggcagg
      181 gtgagcggcg ggccttccgc cggaccgatc aactgcacga agcccgccag cgcgcggcag
      241 acggcgtcgc tcgccttgaa attacgatag gggccggacc tgccgaacca ggagagatcg
      301 atgacgacga gatgacggta ggcgccatgg tcgccgccgg tggaatcgat cagcacgtcg
      361 gcgccgcgca acaacgcctc gagctcgacc ttgttggacg tgacgctctt cttgccgtag
      421 ttgaggtagg cgaaccagcc gctggcgccg tcgatcagcg gcggaaagca acggttggaa
      481 tctcccttgg acggttcgac cttgatgacg tcagcgccga aatcggcgaa caggcgcgcg
      541 gcataggctc ccgcgggcaa ggagccgagc tcgacgacgc gaatccccga cagacgccct
      601 ttcattcggc gacggcggcg tgggtcggca ggaaggcggg catcacttcg cgggcgaagg
      661 cgcgcaggtt gccgaccgag gcgttgggat cgaccagcag gatgttggtg gcgccgccgg
      721 cctcgagctg cttcagccgg gcgatgactt cctcgggcat gcccaggagc ggcgccgtat
      781 cgtcctcgac ccggtcgggc agcttgtcac gcgccaggtc accgatcacg ctcaccacgc
      841 gcttgcgggt ctcgtaggcc gcggcccgct cgctctcgtc atggaacatc tgcaagggtc
      901 gggcggtcgc caccatgttg gggtcataga cgcggccgac gcgcccgcat tcctcgcgga
      961 agatggcgat gcgctggatg atctgatcga cctgggcgag ctggtcgagc agcaggttgt
     1021 aaccctcgcg cgcggcgcgg cggacgctgt cgtggctgcc ggcggccagc cacagcggcg
     1081 ggtgcgggcg ctgcagcggc tcgggctcga cgacgacgtc gtcatagtgc cagcgcttgc
     1141 cgtgatggct gaaccggccg ttgctggtcc atgccttgcg gatgatctcg atcgcctcgt
     1201 cgaagcgttc ggtggcttcg gcgatgggga tgcagaagcc gtcgaactcg gcctggcgat
     1261 agcccttgcc gatgccgaaa tcgacccgcc cgccgctcaa caggtcgagc gtggcgacct
     1321 gctcggccac cagcacggga ttgtgccacg gcagcacgac caccgccgtg ccgaggcgga
     1381 tgtgccgcgt cttggccgcg agataggcca gcaccgtcat cgaggccgac acctggccgt
     1441 ggccggtgaa gtggtgctcg accatgaaga gctggcggaa gcccagacga tcggcttcgc
     1501 tcacatactc gatgaagctg tcatagccct ggctgtcttc gaggccggcg ccgcgtttgg
     1561 tccgcgcgcc gccgaatagt ccgaactgca tgtttccatc cctcaggttt gttcgatcat
     1621 aaccaatcgg cggaaaaagg tactaggcaa ccgtccttgc tccggcgcaa actgcagcac
     1681 gacgaaggcg aaatatcgcc acgccatggg gaggaaatcg atgccagcgc ggtgttgcag
     1741 ccagttcgcc atgcgagtgg attgacccgg caccatggcg gtctcgctcg acctcctgat
     1801 gaacgcggtg atctcgggcc tgctgctggg cgggttctat gccgccgtat cgatcggcgt
     1861 ggcgatcgcc ttcggaatgc tcgatatcgt caacatcgcc catccggcct tcatcctgct
     1921 cggctcctac atagccttca tcggcaatac cgtgttcggc atcgatccga tcctggccgc
     1981 ggtgatcatg ttgccggcct tctacctgct cggcatggcg gcctaccagg tctactacgt
     2041 ggccttcgag cgacgcgacg accagtcgct gcgcggcctg tcgtttttct tcggcgtgct
     2101 gttcatcagc gaagtcgcgc tcgtgctgat cttcggcgtc gattaccgga cggtgcaggc
     2161 accctatatc gggcccagcc tcgatcttgg cctgttcgcc ctgccgctgc gcctgctggt
     2221 gccgttcctg gtgtcgatgg tcatggcggt cggcctgcag ctcttcctgt cgcgcacctt
     2281 cgtgggacgc gccgtccagg cggtggcgca ggatcaacag gcgctcaggc tgatggcggc
     2341 caacccgacc aggatcaagc gcatcgcctt cggcctgtcg atcgccaccg cgtcgctggc
     2401 cggcgcgtgt ctgatcattt accagccggt cgagccgtcg atcgggcgag agtatatcgg
     2461 ccgcgttttc gccatctgcg tgctgggcgg gctgggcagc ctgcccggca tggtgatcgc
     2521 ggcgatgacg ctcggcatcg ccgagagcct gacctcgacg ttcttcggcc cgtcgtgggc
     2581 gccggcggtg gccttcggca tcctgctcgt gaccttggcg gtgcggccca gtggcatcct
     2641 tggccgttag cggagcagca cctggcctgc gcggggtgcc gttcaccctg gtgctgatcg
     2701 ccgtcgccgc ggcgatcttc gccttcggac gatggctcga caacagctat gccttcgttg
     2761 tcggctatat cgtcgtccag tacatggtgc tgggtaccgc gtggaacatc ctgggcggct
     2821 acaccggtta cgtgaatttc ggcgtcacgg cgtttttcgc catcggcgcc tactcgacgg
     2881 tggcgctgca caagctcgtg cccaccttgc ccttgccggt gatgatcgtg gtgagcggcg
     2941 tgctggccgg tcttgtcggg ctgcgcacgg gctacctgac cctgcgcctg cgcggggtgt
     3001 tcttctcgat cgccacgctg gcgctggcgg tggtggtgca gacgctgatc accaactggg
     3061 atttcgtcgg cggggcacgc ggcgcctatg tgctgcgtcc gcgcatggcg ccgctgatcg
     3121 gcggtgagta catgcaatac ctgttcctgc tcatgctggg cctgggcgtc atcgtgctgg
     3181 cgacggcgcg cgccatcgaa cgctccgccc tgggctacgg cttcgccgcc atccgcgacg
     3241 acgaagcggc ggccgaggcg tccggcgtgc cgaccttgaa gctgaagctg atcgcgacga
     3301 ccttgtccgg cggtttcatg ggcatggccg gcgcgccgtt gccctttcag gtgacctatc
     3361 tcgatcccgc gtcgggtttc agcctgaact acgcggtgaa cgccatcgct atgccgctga
     3421 tcggcggcac cggcagctgg ctgggcccgg tggtcggcgc ggtgctggtg ggtggcttgc
     3481 aggaatatct tcgggtgacg atctcgtcgg ccgtcaatgt gctggtcgcg ggcgtgctga
     3541 tggtcgcctt cgtgatcgcc gcgcctcagg gcatcgtcgg cctgttccag aggaagcgat
     3601 gacggcgctg ctgcaggtcg cgggtctcgg caaacgcttc ggcggcttcg ttgcgctcga
     3661 cgccatcgac ctcgacgtcc agcagggcga gcggctcggc ctgatcggac cgaacggctc
     3721 gggcaagtcc accctggtga actgcgtctg cggcaccttg cgcaacgaga gcggcagcgt
     3781 gcacttcgcc gatgaggcgc tggacgggct gtcggcccac caacgcacgc ggcgcggcct
     3841 ggcgcgcagc ttccagttgc cgcggccctt cgccagcctg tcgctggccg agaacatccg
     3901 cattcccatc ctctacaccg tgaatgcccg cccggcggcc gcgctgggcc gcgcggcgat
     3961 cgacgcgcgc tgccttgacg tcctcggcca ggtcggcctg gccggcaagg ccgagcgact
     4021 gccgcgcgac ctgacgcaga tcgagatgcg caagctcgag ctggcgcgcg ccatggcggc
     4081 cgagcccaag ctcctgatcg ccgacgaagc gatggccggg ctgtcgcatg gcgaggtcga
     4141 cgagatcatc gcgctcctga tccgcctgaa cgagcggggc gtcaccgtga tcatgatcga
     4201 gcacatcatg cgggcggtga tggaattctc ccagcgcctg gccgtgctgg tggcggggcg
     4261 caagatcgcc gacggtccgc ccaaggacgt ggtgcgcgat cccgaagtcg tgagggcgta
     4321 ccttggcgag tagcctcacc gtcgccaaca tcgaggccgg ctacggcgcg gtgcgcattc
     4381 tgcatgacgt atcgctgcat gtcggcgcgg gcgagacggt ggcgctgctc ggcaccaacg
     4441 gcaacggcaa gtcgaccctg atgaaatcca tcatgggcat ggtgcgcccg tccgccggcc
     4501 gcatcacggc cgtgatcgac ggcacggcgc acgagctggt cgggctttcg acggaggaga
     4561 tcgtcgatct cggtgtcggc ttcgtgccgg aggggcggcg gctcttcccc aagctcagcg
     4621 tgaccgagaa cctgctgctc ggtgccttcc ggccgaccgc gcgctcggtg atcgcccgca
     4681 acctcgattt ctgcttcgag accttcccgc gcctgaagga acgctcgcgc cagctcgccg
     4741 gcagcatgag cggcggcgag cagcagatgc tggcgctggc gcgcgcgctg atgtcggcgc
     4801 cgcgcatcct gctggtcgac gagccctcgg tcggcctggc gccgctcctg gtcagccgca
     4861 ccatcgacaa gatcaaggag ctgaaggagg gctacgacct gatcgtgctg atggccgagc
     4921 agaacttcac ccaggccatc cgcatcgccg accgcggcta tgtcatcgtg cacggcaaga
     4981 tcgcctttac gggcgattcg gccgaggccc tgaacaacaa cgacctgatc cgcgagtttt
     5041 atctcggggc gtgatggcgc acgaaagccg ttacgccata actgtcatcc cgagcgaggg
     5101 acctttaagg cctcagacga gatccttcgc tacgctcagg atgacgagcc ttcggctcgt
     5161 cacttcttcg gatcgtacgg atagatgatg ttgccggtct tatacttggt cggccacagg
     5221 atcacttccg tcttggggtc gcggaactgg tcgacgtcgt tgcctttgac gccctggaac
     5281 tgcaccgcca tcacctgcgc ggtctcccat tcgccttcct tgttgaagcg gacgtcgccg
     5341 accacggtct tgaaggtgtt cttgcgcgtg aactcggcga gcttggcgtc atcggtgccg
     5401 ccggctccct tcaccgcctg ctcgacgacc tgcatcaggg cgtagccgaa cggcggcagg
     5461 taatagccta aaaggtcgac gccggcggcg gccgacttgg tctggtacct cttcacgaag
     5521 tcacggccct cgtccgaggc gaagccggcc cacggcagcc agaagtcgta gaccacgata
     5581 ccgttcaaca atggcccgag ctgcgtcttg atggaggtgg cctgcaggcc gaccatgccg
     5641 ccgccgtaga tcttgggctt gaagccgatt tcgctcgagg cgcggatgat gcctaccgaa
     5701 tcgggcggat aggaacaggc aaagaagacg tcgggattgg tggccgccac cgcacgcacg
     5761 atcggcgtgt agtcggccgt ggtcggcggg tagttcttgt cgtagaccag cttcagtccg
     5821 accttcttgc agatgttgcg cacgccctcc atggcgttgc ggggaaattc cgcatcggcg
     5881 ccgaccaggg ccagcgtctg cggcttgggg ttctgctcca tcgcgacttc gaggaagccc
     5941 tcggcaaagg attccttggg ccgcggtccg cccgtcggcg tcatggagaa atagcgcgga
     6001 tagtggaact ccgaattcac cgccaggccg agcagggaga agaacgtacg gtccttctgc
     6061 atcacgatcg gcatcgccgg cgcgatcatg ttggtggcgt agccgctcac cacgatgtcg
     6121 accttgtcga cgtccaacag cttggtatag aggccgggaa ccgtcgaagg gttggactgg
     6181 tcgtcgtagt agacgagttt caccggccgg ccgaggatgc cgcctctggc attgatgtcc
     6241 tcttcggcga tctgcattgc cagcagcgcg gccttgccgt tgggcgcaag cccgccggtg
     6301 agcgccatgc cgaaaccgat ggtgaacggc ttggcctggg ccgtggcggc gccggcgaag
     6361 cctgtcgctg cgccggcgag ggcgagcttg ttgaaggtac gacgctcgat gcgcatgact
     6421 atttatcctc ccaacgtatt ttggctgatc ctagagcctg ttccggttga agggaattcg
     6481 gattcttccg ggagcgcggg cctccaggcc cgctcatgac ccatgatgcg gactcggtcg
     6541 gggtaacccc cgacctgagg aggtccgcgc tccggggcta cataagcggc ggcgggccgg
     6601 cgacgccgag cgcatgctgg ccgaagaggg cgccctgcag gtcgggcgag aacatcacgt
     6661 gggcattggc ggcatgcgca tcgcggaata gccgctgcat gctgccggtc gtatagaggc
     6721 cgcccgatcc cgctatgccc atcaggatgt cgacggcttc caggcagagc cgggtggaga
     6781 agaacgcatc gcgccggtag cgcaccttgt cgtcgtgcgc gggctcgcgg ccggcgcggg
     6841 cgaccgccat ggcgtgctcg caggcccgcc gcatgatgac ttcggcgttg tcgatgcggg
     6901 cgctggcctc ggccaccttg atctggaccg tcggattggc gttgaccggc aggccggtgt
     6961 tggtggcgtt gcgcttgcgc gcggcgccca ccaccaggtc ataggcgcct tgggcgcagc
     7021 ccagcatgac gccggtcagc acatagggtc cgagcgccag caagggcagc ttgaacaatg
     7081 gcgtcgtgtt caccgccgag ccgggatgcg gcttgccgtt gaaggcccag gccgaaaggc
     7141 ttcgacgctc gggcacgaac agcgccttgg tggcgacgtc cttcgatccg gtgccgcaca
     7201 gcccgacggc gtgccaggta tcgatgatct cgtattcgga gcgatgcgcc agggcaaagc
     7261 gctggtcgac gaccggcccg tcgtcgcgct cgcgcaccat gaagcccagc atgttccagt
     7321 cggaattgtc gacacccgag gagagcggcc agcggcccgt cacttcccag ccgccatcga
     7381 ccttgcggcc acgtccgccg gcgaaggcca gcgacgtggc gatcagcacg tcgggcgagc
     7441 ggtcccacaa ttcgtcctgc gtctcgggcg ggaaatagcc cagcatccaa tggtggctgg
     7501 cgaggttgcc gacgttccag gcggtcgacg gacagacgcg ggccatctcg gcgcagacat
     7561 cgacgaagat gccgacatcg agctcggcgc cgccgacacg agccggctgg gcgaagcgga
     7621 aaagcccggc atcgtgcaga tcgcgctcgg tgtcgtcagg cagccggcgc agccgctcgc
     7681 acgcctcggc gcgctcggcc agcgtcggcg ccaggcgccg cgcgcgctcg accatttcgc
     7741 cgtagccgac gccggcaaac gacacccgct tggtcggcag ggtcgccgat ggcgtccatt
     7801 cgaacctgga aatgttccgc cccttcatcg tgttttgcag acgatgcgta gtgcaaacgt
     7861 cgcggtcaag ccggtacaat tggagcgcgg acctccaggt ccactcgcat tcgtgaagcg
     7921 aactcggtcg gggtcacacc cggcctgagg aggtctgcgc gccgcaagag atttcgagaa
     7981 caagaaggag tgcgtaacca cctcgactag tcgggaggaa acaatgaaaa tcccaaaggg
     8041 atgctttgcg ttgttgggca tcgtggcgtt gacggtcgcg gcgagcggcg cgtcggccca
     8101 gaaatacggc ggcgttctaa aaatccagca catggacacg ccgcccagtg cctcgatcca
     8161 cgaggaggcg accgtctcgg tcgccatacc gttcatggcg gtctacaaca acctcgtcat
     8221 cttcgaccag aacgtcgcga ggaacagctt cgaatcgatc gttcccgaac ttgccaccaa
     8281 gtggacgtgg agcagcgacg gcaagcaact cgccttcaag ctgcgccagg gcgtgatgtg
     8341 gcacgacggc aagccattca ccgcccagga cgtgcgctgc accttcgaga tgctgctggg
     8401 cgagggcaag ctgcggcgca atccgcgcgg ggcctggtgg agcaacgtcg agaaggtgac
     8461 ggccgacagc gacttcgacg tcacgttcca cctcaaggaa cggcagccct cgctgctggc
     8521 gctgctcgcg tcgggctaca cgccgatcta tccctgccat gtcccgatcg acaccatgcg
     8581 ccgcaagccg gtcggcacgg ggcctttcaa gttcgtcgag ctcaagatga acgagggcgt
     8641 caagctcacc aagaacaccg actactggaa gccgggccgg ccctatctcg acggtatcga
     8701 gtacaccatc atcgccgacc gctcgacccg catgctggcc ttcgccagcg gcaagttcga
     8761 catgacgttt cccaccgacc tcacggtgcc gctgtacaag aacatgagga aggatgcgcc
     8821 gcacgcgcag tgcaccatgc gcggcaccgg agtcaccacc aacctgatcg tcaatcgcga
     8881 ggtgccgccg ttcgacgacc cgcgcatccg ccgcgcattg gcgctcacgc tcgatcgcca
     8941 ggccttcatc gacatcctga ccgagggcga gggcaagatg ggcggcgcca tgctgccgcc
     9001 gcccgacggc gtgtggggaa tgccgccgga gatggtcaag accatcgtcg gctacgaaaa
     9061 tgtcgcggcc aaccgggaca agggccgcga gctgatgaag gaggcgggct acggtcccga
     9121 caagcgcctc aaggtcaagg tcagcacgcg caacatcgcg cccttccgcg acccggcaac
     9181 catcctgatc gaccatctca agcacatcta tgtcgacggc gagctcgaag tgatcgacac
     9241 cgccg
//
LOCUS       DASWGA010000359         2775 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_166078, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000359 DASWGA010000000
VERSION     DASWGA010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2775
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166078"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..1073)
                     /locus_tag="VF991_08630"
     CDS             complement(99..1073)
                     /locus_tag="VF991_08630"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9556546.1"
                     /translation="MPAAGSTASRKTAEAAITVRPINGFIGAELEGVDLRRPLSADEF
                     KIVHDALVRYEVIVLRDQDITIDQQMAFGALFGELSIHPFSPNLPDKPEVIVLDYSKD
                     NPPALTDIWHVDETFREAPPMATILRAKTVPEVGGDTLFASMSAAYRSLSERMKQHIH
                     GMEALHDFKPWRPLFGHSDRAKLRKLEDDFPNPWHPAVRVHPVSGRRVLYVNQQFCVR
                     IKDLKSDESDTLLAFLYRQATIPEYQLRVKWKPNTLVMWDNRSVQHYAAHDYYPARRT
                     MERVTVKGDRPVGVGGSYTPDDVAANGTTKPAIAEGTRPGPKRAFDRY"
     gene            1129..2223
                     /locus_tag="VF991_08635"
     CDS             1129..2223
                     /locus_tag="VF991_08635"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX9556547.1"
                     /translation="MASGLENEFATLHEIVKAAKIRLNPNIWDYLIGGTETETTLRRN
                     RMALDSIAFKPRVLRDVSKIDPSSEILGRRIRLPVMLAPVGSLESFEPGGGITVAKGA
                     GAGNVAMLISSVTTLKLEDIVKGGGGPKIYQLYVRGDDKWVADRVKQAMDAGYDAFCI
                     TVDTQVYSRRERDIAKRFVKSWRVAATGQDHQAAFSWENFKRVKDKYPDVKFMLKGIG
                     TAEDADLACRQGVWAVYCSNHGGRQLDHGRGSAAVLPEVIDAVAGRAKIAVDGSFSRG
                     SDIVKAICMGADWVGLGRLYCYGLAAAGAPGIERVIELLEEEMREVMGLLGVSSLKQL
                     DKSYIVAAAPTNLPGVHSAFPLLNLEDQGY"
     gene            complement(2250..>2775)
                     /locus_tag="VF991_08640"
     CDS             complement(2250..>2775)
                     /locus_tag="VF991_08640"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9556548.1"
                     /translation="TWGRLDLVFNNAGGGAPPVPLEELPYETWLGVVAANLTGPFLCT
                     QEAMKIMKGQSPRGGRIINNGSISAHAPRPFSVAYTSTKHAITGLTKSTSLDGRAYDI
                     ACGQIDIGNAITPMTERMTKGVLQPNGTTIAEPRMDVSAVANAIVYMDSLPLDANVQF
                     MTVMATKMPFVGRG"
BASE COUNT          451 a          847 c          980 g          497 t
ORIGIN      
        1 tgaggggctg attgggccac gcggcctggg cccgcaaggc gcccggcgcc agcaacacag
       61 ccaggccgac cagcgtgcgc cgtctggcga aggccatctc agtagcgatc gaaggcgcgc
      121 ttgggtccgg gccgtgtgcc ctcggcaatg gcgggtttcg tggtgccgtt ggcggccacg
      181 tcatcgggcg tgtaggagcc gccgacgccg accggccggt cgcccttcac cgtcacgcgc
      241 tccatggtgc ggcgcgccgg atagtagtcg tgggcggcat agtgctggac cgagcggttg
      301 tcccacatca ccagcgtgtt gggcttccat ttcacgcgca actgatactc ggggatggtt
      361 gcctggcggt agaggaaggc gagcagcgtg tcgctttcgt cgctcttgag gtcttttatg
      421 cgcacgcaga actgctggtt gacgtagagg acgcgccggc ccgacaccgg atggacgcgc
      481 accgccggat gccagggatt gggaaagtcg tcctcgagct tgcgcagctt ggcgcggtcg
      541 ctgtggccga acaacggccg ccacggcttg aagtcgtgca gtgcttccat gccgtggatg
      601 tgctgcttca tgcgctcgga gaggctgcga taggcggcac tcatgctggc gaacagcgtg
      661 tcgccgccga cttcgggcac ggtcttggcg cgcaggatgg tggccatcgg cggtgcttcg
      721 cgaaaggtct cgtcgacgtg ccagatgtcg gtcagcgccg gtggattgtc cttggaatag
      781 tcgaggacga tgacctcggg cttgtcggga agattgggcg agaagggatg gatcgacagc
      841 tcgccgaaca gcgccccgaa cgccatctgc tggtcgatcg tgatatcctg gtcgcgcagc
      901 acgatcactt cgtagcggac cagcgcgtcg tgcacgatct tgaactcgtc ggcgctcagt
      961 ggacggcgca ggtcgacacc ctcgagttcc gcaccgatga agccattgat gggccgcacc
     1021 gtgatcgccg cctcggctgt cttgcgcgat gcggtagaac ccgctgccgg catcgttccc
     1081 tccgattgct tattgcgcta cttctagcgc gaatcggcgg ggagaaccat ggcaagcggg
     1141 ctggagaacg aattcgcgac gctgcacgaa atcgtcaagg cggccaagat ccgcctcaat
     1201 cccaacatct gggactacct gatcggcggc accgagaccg agacgacgct tcggcgcaac
     1261 cgcatggcgc tcgattcgat cgccttcaag ccgcgcgtgc tgcgcgatgt ctccaagatc
     1321 gatccgtcgt cggagatcct cggccgcagg attcgcctgc cggtgatgct ggcgcctgtc
     1381 ggctcgctcg aatccttcga gccgggcggc ggcatcaccg tcgccaaggg cgccggcgcg
     1441 ggcaacgtgg cgatgctgat cagctcggtg acgacgctca agctggagga catcgtcaag
     1501 ggcggcggcg gtcccaagat ctaccagctc tatgtacggg gcgacgacaa gtgggtcgct
     1561 gaccgcgtca agcaggcgat ggatgcgggc tacgacgcct tttgcatcac cgtcgacacc
     1621 caggtctatt cgcggcgcga gcgcgacatc gccaagcgct tcgtgaagtc gtggcgcgtg
     1681 gcggcaaccg gccaggatca tcaggccgcg ttctcgtggg agaatttcaa gcgggtgaag
     1741 gacaaatacc ccgacgtgaa gttcatgttg aagggaatcg ggacggctga ggatgccgat
     1801 ctcgcctgcc ggcagggcgt gtgggcggtc tattgctcca accatggcgg ccgccagctc
     1861 gaccacggcc gcggctcggc agccgttttg ccggaagtga tcgacgcggt ggccggccgc
     1921 gccaagatcg cggtcgacgg ctcgttcagc cgcggcagcg atatcgtcaa ggcgatctgt
     1981 atgggcgccg actgggtcgg gctgggccgg ctctactgct acggtctcgc cgccgcgggc
     2041 gcccccggca tcgagcgcgt gatcgagctt ctcgaggagg agatgcgcga ggtgatgggc
     2101 ctgttgggtg tgagcagcct aaagcagctc gacaagagct acatcgtggc cgccgcgccg
     2161 accaacctgc ccggcgtgca cagcgcgttt ccgctgctca atctggaaga ccaggggtac
     2221 taggctgggg gccagcgcgt gtgaacgcgc tagcctctcc cgacgaacgg catcttggtc
     2281 gccatcaccg tcatgaactg gacgttggcg tcgagcggca ggctgtccat gtagacgatg
     2341 gcattggcca ccgccgacac gtccatgcgc ggttcggcga tggtcgtgcc gttgggctgc
     2401 aggacgccct tggtcatgcg ctcggtcatc ggcgtgatgg cgttgccgat atcgatctgg
     2461 ccgcaggcga tgtcgtaggc gcggccgtcg agcgaggtcg acttggtgag tccggtgatg
     2521 gcgtgcttgg tcgaggtgta ggcgaccgag aacggccgcg gcgcatgcgc cgagatcgag
     2581 ccgttgttga tgatgcgccc gccgcgcggg ctttggccct tcatgatctt catcgcttcc
     2641 tgggtacaca ggaaggggcc ggtgaggttg gccgccacga cgccgagcca cgtctcgtag
     2701 ggcagctcct cgagcggcac gggcggggcg ccaccgccgg cattgttgaa gacgaggtcg
     2761 agccggcccc aggtc
//
LOCUS       DASWGA010000360         2781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_294797, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000360 DASWGA010000000
VERSION     DASWGA010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294797"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /locus_tag="VF991_08645"
     CDS             <1..779
                     /locus_tag="VF991_08645"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9556549.1"
                     /translation="AHETAKALGAKAIAFGDSVASPGVAKHLVELAVKQFGGIDIVVN
                     NAAILRDAFIFRADPRDWDAVIRNNLSAPFYLINAASAVMREQGKAGRGGGGGYDWGR
                     IVNIVSSAGLYGNLGQAAYASAKAGLFGLTRVTAMDLARAQITANAVAPFARTRVTDI
                     IQPANEAQKTYKERALKIGAHHVANLVTALCSPAGKGITGQLLGVRGREVFLFGQPRP
                     IARLEAGAPATLAQDLSAKLSDKFTDLTTDLEAFNTEPLV"
     gene            791..1498
                     /locus_tag="VF991_08650"
     CDS             791..1498
                     /locus_tag="VF991_08650"
                     /inference="COORDINATES: protein motif:HMM:NF016993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Phenylacetic acid catabolic protein"
                     /protein_id="HEX9556550.1"
                     /translation="MSEPIVVKTVEELKSAPAEYREAVAKLVISHAINELYGAQVFDE
                     PAIAYAPTPYAKWLTCRVAMEEYGHHVRFKQLGMQMGIAEERMMPGTGKRPLSIFEFP
                     LKTWEEFVAIKLLADLAEILQVEDLLHCTFHPLRNLARATMPEERFHAQFGEDFTAEL
                     IKTPDGKARLQAAVNEYFPYLPSFFGGSKSKNNEIFRKWHIKQRTNDEMRQDFMKRAT
                     EVATKYGLSLPEARQAA"
     gene            1495..2052
                     /locus_tag="VF991_08655"
     CDS             1495..2052
                     /locus_tag="VF991_08655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556551.1"
                     /translation="MSDVVALPRTLIEQVKAEVRTAAWFAALGEPLTDGDRADADAYL
                     EALGLDTLVLGLAHDWPEAERVLKAPDWSPAWWDREEAERRRLLAEAEARYPERALWT
                     ALTELTTEVGDIVHGKAGVAAARMGGAAKASIHVAAGAAAQAAYQLALARLAEEAASP
                     FESKFRLFAAGRWPLGVVGSTLVLF"
     gene            2069..>2781
                     /locus_tag="VF991_08660"
     CDS             2069..>2781
                     /locus_tag="VF991_08660"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556552.1"
                     /translation="MTSYTAPARTIGRLKRPFGNLYYEVSGSGPALLFAHGLGGNHLS
                     WWQQVAHFAPHYTCVTFAHRGFTPSDPVPGGPDAADYAGDLAALIDHLKFREVRLVAQ
                     SMGGWTMLDYAIARPARVKALVLSSTSGTLDRRSCDPSGGSAYDAWLKDAEEKIAAGA
                     ARGIHPAMGAPAAERSPALHLLYRSIDDMAGIADKEKVRAGLRRTAKRSLAELKDFRV
                     PTLLIAGGEDVVFPPFLASA"
BASE COUNT          475 a          944 c          925 g          437 t
ORIGIN      
        1 tggcgcacga gacggccaag gcactcggcg ccaaggccat cgccttcggc gacagcgtcg
       61 cctcgccggg cgtggccaaa catctggtcg aactggcggt aaaacagttc ggcggcatcg
      121 acatcgtggt gaacaatgcc gcgatcctgc gcgacgcctt catcttccgc gccgatccgc
      181 gcgactggga cgcggtgatc cgcaacaacc tctcggcgcc gttctacctg atcaacgccg
      241 cctcggcggt gatgcgcgag cagggcaagg cgggccgcgg cggtggtggc ggctacgact
      301 ggggccgcat cgtcaacatc gtctcctcgg ccggcctcta cggcaatctg ggacaggccg
      361 cttatgccag tgccaaggcg ggcctgtttg gcctcacccg cgtgacggcg atggatctgg
      421 cgcgcgcgca gatcacggcc aacgcggtag cgccgtttgc ccgcacacgg gtcaccgaca
      481 tcatccagcc ggccaacgag gcacagaaaa cctataagga gcgcgcgcta aaaatcggcg
      541 cccaccacgt cgccaacctg gtgacggcgt tgtgctcgcc ggccggcaag ggcatcactg
      601 gacaattgct gggtgtgcgc ggccgcgagg tgtttttgtt cggccagccg cggccgatcg
      661 cgcggctgga ggcgggagcg cccgccacgc tggcccagga tctcagcgcc aagctttcag
      721 acaaattcac cgacctcacc accgatctcg aagccttcaa taccgaaccc ctcgtttgag
      781 gagacttccc atgagcgagc ccatcgtcgt caagaccgtc gaggagctga agagcgcgcc
      841 cgcggagtat cgtgaggccg tggccaagct ggtgatcagc cacgccatca acgagctcta
      901 cggcgcgcag gtgttcgacg agccggccat cgcctatgcg ccgacgccct acgccaagtg
      961 gctgacctgc cgcgtggcga tggaggaata cggccatcat gtgcgcttca agcagctcgg
     1021 catgcagatg ggcatcgccg aggagcgcat gatgccgggc accggcaagc ggccattgtc
     1081 gatcttcgag tttccgctaa aaacctggga ggagttcgtc gccataaagc ttttggccga
     1141 cctcgccgag atcctgcagg tcgaggacct gctgcactgc accttccacc cgttgagaaa
     1201 ccttgcgcgc gccaccatgc cggaggagcg cttccacgcc cagttcggcg aggatttcac
     1261 cgccgagctg atcaagacgc cggacggcaa ggccaggctg caggccgccg tcaacgaata
     1321 cttcccctac ctgccgtcgt tcttcggcgg ctcgaagtcg aagaacaacg aaatcttccg
     1381 caagtggcac atcaagcagc gcaccaacga cgagatgcgc caggacttca tgaagcgcgc
     1441 gaccgaggtc gccaccaaat acggcctctc cttgccggag gcccgacagg cggcgtgagc
     1501 gacgtcgtcg ccctgccccg caccctgatc gaacaggtga aggcagaggt gcgcacggcg
     1561 gcgtggttcg ccgccttggg cgaaccgttg accgacggcg accgcgccga tgccgacgcc
     1621 tatctcgagg cactgggcct ggacaccttg gttctcggac tggcgcatga ctggccggag
     1681 gccgagcggg tgctgaaagc gcccgactgg tcgccggcct ggtgggatcg cgaagaggct
     1741 gagcgccggc gtctgctggc ggaggccgag gcgcgctatc cggagcgggc gctgtggacg
     1801 gcgctcaccg aactcaccac cgaggtgggc gatatcgtgc acggcaaggc aggcgttgcg
     1861 gcggcgcgca tgggaggggc tgccaaagcc tcgatccacg tcgcggccgg cgcggccgcc
     1921 caggcggcct accaactggc gctggcgcga ttggccgagg aggccgcctc gcccttcgaa
     1981 agcaagtttc gtctgttcgc cgccggccgc tggccgctcg gcgtcgtggg ctctacgctg
     2041 gtcctcttct gagaggacgt ttattcccat gacttcttat acggcgccgg cgcgcaccat
     2101 cggccggctg aaacggccgt tcggcaatct ctactacgag gtgtcgggca gcggaccggc
     2161 gctgctgttc gcccatgggc tgggcggcaa tcacctgagc tggtggcagc aggtcgcgca
     2221 cttcgcgccg cactacacct gcgtgacctt cgcccatcgc ggcttcacgc cgtccgaccc
     2281 ggtgccaggc gggcccgacg ccgccgacta cgctggcgac ctcgccgcgc tgatcgatca
     2341 tctgaaattc cgcgaggtgc ggctggtcgc gcaatcgatg ggcggctgga ccatgctgga
     2401 ctatgcgatc gcccggccgg cgcgggtcaa ggccctggtg ttgagctcga cgtcgggcac
     2461 gcttgatcgc cgcagctgcg acccgtcggg cggcagcgcg tacgatgcct ggctgaagga
     2521 cgcggaagaa aagatcgcgg ccggtgctgc acgcggcatc catccggcga tgggcgcgcc
     2581 ggcggcggag cgttcgcccg ccttgcacct tctctatcgc agcatcgacg acatggcggg
     2641 cattgccgac aaggagaagg tacgcgccgg cctgcgccgc accgccaagc gctcgctggc
     2701 cgagctaaaa gacttccgcg tgcccacgct cctgatcgcc ggcggcgagg acgtcgtctt
     2761 cccgcccttc ctggcaagcg c
//
LOCUS       DASWGA010000361         6022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1051375, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000361 DASWGA010000000
VERSION     DASWGA010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6022
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1051375"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2556)
                     /gene="clpB"
                     /locus_tag="VF991_08665"
     CDS             complement(<1..2556)
                     /gene="clpB"
                     /locus_tag="VF991_08665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEX9556553.1"
                     /translation="MNQEKYTERMRGFLQSAQMLALREGHQRLVPDHLLKVLLDDPEG
                     LAANLITSAGGDSRAVHRAVEASLAKLPKVEGQGAGQIYMAPETARVFDQAEAIAEKA
                     GDSFVTVERMLMALALAKGTDAADALAKGNVKPKALEKAIQDLRKGRTADSASAEGGY
                     DALKKYARDLTQAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIA
                     EGLALRIVNADVPESLKSKKLMALDLGAMVAGAKYRGEFEERLKAVLSEISAAQGDII
                     VFIDELHTLIGAGKADGAMDASNMLKPALSRGELHCVGATTLDEYRKHIEKDAALARR
                     FQPVFVAEPSVEDTISILRGLKEKYELHHGVRIADAAIVAAATLSNRYISDRFLPDKA
                     IDLMDEAASRIRMQVDSKPEALDELDRRIIQLKIEKEALKKESDQASRDRLERLEKEL
                     SELEEKSAELTAQWKSAKDKLADSQKIKEQLDKARSELEIVQRKGELAKAGELAYGVI
                     PDLEKKLRDAEGHAVQGGKGVKEEVTPEDIAAVVSRWTGVPVDKMLEGERAKLLRMEE
                     QLKKRVVGQDEAVRAVSDAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKAIAQFL
                     FDDDQAMVRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEVE
                     KAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTLIVLTSNLGSSHLAALKDGEATDTVR
                     EQVMEEVRRAFRPEFLNRLDEILLFSRLSRANMTDIVEIQLNRLRKLLADRKIDLKFD
                     GKALQWLANRGYDPVYGARPLKRVIQQSLQNPLATLLLEGKVKDGDTVEIGVEG"
     gene            2752..3309
                     /locus_tag="VF991_08670"
     CDS             2752..3309
                     /locus_tag="VF991_08670"
                     /inference="COORDINATES: protein motif:HMM:NF025595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4337 domain-containing protein"
                     /protein_id="HEX9556554.1"
                     /translation="MSAEHGHVDSSNKKIALLVAVLAAFLAISETGGKSAQTEVLTQH
                     VEATNMWTFFQAKTVRQTVVRTAADELDAQYRDAGNMPAAVKGQLEQWRKTVQRYDSE
                     PETNEGRKELMARAKTHESKREKARAAYHLFEYGSAAFQLAIVLAGAAALTSVMWLTV
                     VSGTLGLIGAVFTFLGFFEPTLVHF"
     gene            complement(3404..3856)
                     /locus_tag="VF991_08675"
     CDS             complement(3404..3856)
                     /locus_tag="VF991_08675"
                     /inference="COORDINATES: protein motif:HMM:NF025137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HEX9556555.1"
                     /translation="MFDSSGPDVRVRGNAHQVFDKYQALAREAAASGDRIMAEGYWQY
                     ADHYFRMIQTMGGFGQRNNVGWGDGGEEGQSGPPQQGQPGPSNQGNGNGYAQDDRAGG
                     REQRGDGEPGLGGVAFLQNGRPNPTDEDPAADEQPEVPEYVPGTGRRG"
     gene            3809..3973
                     /locus_tag="VF991_08680"
     CDS             3809..3973
                     /locus_tag="VF991_08680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556556.1"
                     /translation="MSVAAHPDIGPAAVEDLVAIGRTVGIVMLWFVMVAAATAAATTI
                     ATAARSLTIV"
     gene            complement(4159..4998)
                     /gene="prmC"
                     /locus_tag="VF991_08685"
     CDS             complement(4159..4998)
                     /gene="prmC"
                     /locus_tag="VF991_08685"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEX9556557.1"
                     /translation="MRDAAAALAAAGIDNVRFEARLLLAHAAGLSAEQLIARGAEPAP
                     AGVAKALRALTARRVGREPMAYVLGEREFWGLPFKVSPAVLVPRPDSETLIEAALALM
                     PDRQRPWRILDLGLGSGCLLLTLLREYPAARGVGLELSGGALAVASANAEALGVAGRA
                     ELVLGDWRQPHWHEQLQGPFDLIVSNPPYIEADAIERLMPEVARFEPKLALDGGPDGL
                     AAYRYIATAAPALMAPDGHLLVEVGVGQVPEISKIFASAGLWAPVCWKDLAGIDRVIS
                     LTH"
     gene            complement(5043..>6022)
                     /gene="prfA"
                     /locus_tag="VF991_08690"
     CDS             complement(5043..>6022)
                     /gene="prfA"
                     /locus_tag="VF991_08690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEX9556558.1"
                     /translation="KFVAASKEYADLGPLVEAIGEWRKAERELEDAEAMAADPDMKAM
                     AEEEAAALKKRLPELERTVKRMLLPRDAADEKNAILEIRAGTGGDEAALFAADLFRMY
                     QRYAAEHGWRFEIMELSDTGIGGYKEAIAAVSGRGVFARLKFESGVHRVQRVPATEAS
                     GRIHTSAATVAVLPEAEEFDIKIDDKDLRIDVFRSSGPGGQSVNTTDSAVRITHIPTG
                     LVVSQQDEKSQHKNKAKAMKILRARLYDAERQRRDEARAADRKGQVGSGDRSERIRTY
                     NFPQSRVTDHRINLTLYKLDEVMEGRALDEIIDALIADDEAGRLAEIAA"
BASE COUNT          931 a         2013 c         1976 g         1102 t
ORIGIN      
        1 gccctcgacg ccgatctcaa cggtgtcgcc gtccttgacc ttgccttcga gcaggagcgt
       61 ggccagaggg ttctgcaggc tttgctggat cacccgcttc aagggtcgcg cgccgtagac
      121 cggatcgtag ccgcggttgg ccagccattg cagcgccttg ccgtcaaact tcaggtcgat
      181 cttgcggtcg gccagcagct tgcgcagtcg gttgagctgg atctcgacga tgtccgtcat
      241 gttggcgcgg ctgaggcgac tgaacagcag gatctcgtcg agacggttga ggaactcggg
      301 ccggaaggcg cggcgcacct cttccatcac ctgctcgcgc accgtgtcgg tcgcctcgcc
      361 gtccttcagc gccgcgagat gggagctgcc aaggttggac gtcagcacga tcagcgtgtt
      421 cttgaagtcg accgtacggc cctggccatc ggtcaggcgg ccgtcgtcca gcacctgcag
      481 cagcacgttg aacacgtcgg gatgcgcctt ctcgacctcg tcgaacagga tcacctgata
      541 gggccgccgg cgcaccgcct cggtgagcac gccgccctcg tcgtagccga cataacccgg
      601 cggcgcgcca atcaggcggc tgacggagtg cttctccatg aactcgctca tgtcgatgcg
      661 caccatcgcc tggtcgtcgt cgaacaggaa ctgggcgatc gccttggtga gctcggtctt
      721 gccgacgccg gtcggaccca ggaacaggaa ggacccgatg ggacggttgg ggtcctgcag
      781 cccggcgcgg gcgcggcgga ccgcatccga aaccgcgcgg acggcctcgt cctggccgac
      841 gacccgcttc ttcagctgct cttccatgcg caacagcttg gcgcgctcgc cttccagcat
      901 cttgtcgacc ggcacgccgg tccaacgcga caccacggcg gcgatgtcct cgggcgtgac
      961 ttcttccttc acgcccttgc cgccctggac cgcgtggccc tcggcgtccc tgagcttctt
     1021 ctcgaggtcg gggatcacgc cgtaggccag ctcgcccgcc ttggcgagct cgcccttgcg
     1081 ctggacgatc tcgagctcgg agcgcgcctt gtcgagctgc tccttgatct tctgcgaatc
     1141 ggccagcttg tccttggccg acttccactg ggcggtaagc tcggccgact tctcctcaag
     1201 ctccgagagt tccttctcca gccgctccag ccggtcgcgc gaggcctggt cgctctcctt
     1261 cttgagcgcc tccttctcga tcttgagctg gatgatgcgc cggtcgagct cgtcgagcgc
     1321 ctcaggcttg ctgtcgacct gcatgcggat gcggcttgcc gcctcgtcca tcaggtcgat
     1381 cgccttgtcg ggcaggaacc ggtcggaaat gtagcggttg gacagcgtcg cggcggccac
     1441 gatcgcggca tcggcgatgc gcacgccatg atgcagttcg tacttctcct tcagcccgcg
     1501 caggatcgag atcgtgtcct cgaccgaggg ctcggcgacg aaaaccggct gaaaccgacg
     1561 cgcgagtgcg gcgtcctttt cgatgtgctt gcgatactcg tcgagcgttg tggcgccgac
     1621 gcaatgcagc tcgccgcgcg acagcgcggg cttcagcatg ttggacgcgt ccatcgcgcc
     1681 gtcggccttg ccggcgccga tcagggtgtg gagctcatcg atgaagacga tgatgtcacc
     1741 ctgggccgcc gagatttccg acagcacggc cttcagccgc tcctcgaact cgccgcggta
     1801 cttggcgccg gccaccatgg cgccgagatc gagcgccatc agcttcttgc tcttgagcga
     1861 ttccggcacg tcggcattga cgatgcgcag cgccaggccc tcggcgatgg cggtcttgcc
     1921 gacgccgggc tcgccgatca gcaccggatt gttcttggtg cggcggctca gcacctggat
     1981 ggtgcgccgg atttcctcgt cgcggccgat caccggatcg agcttgccct cgcgcgccgc
     2041 ctgggtgagg tcgcgggcat atttcttcag ggcatcgtag ccgccttcgg ccgacgccga
     2101 atcggcggtg cggcctttgc gcaaatcctg gatggccttt tcgagcgcct tcggcttgac
     2161 gttgcccttg gccagcgcgt cggcggcgtc ggtgcccttg gccagcgcca gcgccatcag
     2221 catgcgctcg acggtgacga aggaatcgcc ggccttttcg gcgatggcct cggcctggtc
     2281 gaacacgcgc gccgtctcgg gcgccatgta aatctgaccc gcaccctggc cttcgacctt
     2341 gggcagcttg gcaagactgg cctcgaccgc gcgatgcacc gcgcgggaat cgccgcccgc
     2401 cgaggtgatc aggttggcgg cgagaccttc cggatcgtcg agcaggacct tcaaaaggtg
     2461 gtcgggaacc agccgctgat ggccttcgcg cagcgccagc atctgggcgc tctgcaggaa
     2521 accgcgcatg cgctcggtgt atttctcttg attcatctct ctaccctttc attcgcgccc
     2581 ccgtcgttcg gcgggcgaaa gagcggaccc tctccagagg catcctggtg ccgatatggg
     2641 gagggatcgc gaccttgcaa gaccggaccg aacgtgaggc tattcgcgag aagcctggcg
     2701 ggctatgacg accgtcaaca ggacatagat caaacaagcg gggagaattt catgtccgcc
     2761 gaacacggcc acgtcgacag ttcaaacaag aaaattgccc tcttggttgc ggtcttggcc
     2821 gctttcctgg cgatctccga aaccggcggc aagagcgctc agaccgaagt gctgacgcag
     2881 cacgtcgagg ccaccaatat gtggaccttc tttcaggcca agacggtccg ccagaccgtg
     2941 gtgcggacgg cggccgatga gctcgacgcc caatacaggg acgccggcaa catgccggct
     3001 gcggtcaagg gccagctcga gcagtggcgc aagacggtgc agcgctacga cagcgagccg
     3061 gagaccaacg aaggccgcaa ggaactgatg gcgcgcgcca agacgcacga gagcaagcgc
     3121 gagaaggcac gcgcggccta tcatctgttc gagtacggct cggcggcgtt tcagctggca
     3181 atcgtgctgg ccggcgccgc ggcgctgacc agcgtgatgt ggctcaccgt cgtttcgggc
     3241 accctcggcc tgatcggtgc ggtcttcacg ttcctggggt tcttcgagcc gaccctggtc
     3301 cacttctagg gttttcttac cctgagcagc ggcccgaagg gcctgcacaa aaagaaacgc
     3361 ccgacaatcg tcgggcgttc ttcaaagatc caaggctgcc gcttcagccg cggcgaccgg
     3421 tcccgggcac gtactccggc acctcgggtt gttcgtccgc cgccgggtct tcgtcggtcg
     3481 ggttggggcg gccgttctga aggaaagcga cgccgccgag accaggctcg ccatcaccgc
     3541 gctgttcgcg gccgccggcg cggtcgtcct gggcgtagcc gttgccgttg ccttgattgg
     3601 atgggccggg ctggccttgc tgcgggggac ccgactggcc ttcttcgccg ccgtcgcccc
     3661 agcccacgtt gttgcgctgg ccgaaaccgc ccatggtctg gatcatgcgg aagtaatggt
     3721 cggcatattg ccagtagccc tccgccatga tgcggtcgcc cgacgctgcc gcctcgcggg
     3781 ccagcgcctg gtatttgtcg aacacctgat gagcgttgcc gcgcacccgg acatcgggcc
     3841 cgctgctgtc gaagatctgg ttgcgattgg gcggacggtt gggattgtga tgttgtggtt
     3901 tgtgatggtg gccgccgcca ccgccgccgc caccaccatt gcgaccgccg cgcgatcgct
     3961 gacgattgtt tgatctcatt acctaggcca gttgcatgcc ggacgggtgt tgttgttagg
     4021 gaccctctgc ccttcacggg cgccgtcaca gccatttttc agagggatta atcgcccggc
     4081 gccaaccaat cggcccgggt caagcccccc caaggggcgg tattgaacgt agtctcattc
     4141 cccataattg ccaatacttt aatgcgtcaa agatatcacc cggtcgatgc cggccaagtc
     4201 tttccagcaa accggcgccc atagccccgc cgaagcgaaa atcttcgata tttcaggcac
     4261 ttgacctacg ccaacttcga cgaggagatg gccgtccggg gccatcagcg cgggcgccgc
     4321 tgtggcaatg tagcgataag cggcaagccc gtctggcccg ccatcgagcg ccagtttcgg
     4381 ctcgaaacga gcgacttcag gcatcagccg ctcgatggcg tcggcctcga tgtagggcgg
     4441 attggacacg atcaaatcga acgggccctg cagctgctca tgccagtgcg gctgtcgcca
     4501 atcgccgagc acgagctcgg ctcggcccgc cacgcccaag gcttcggcgt tggccgacgc
     4561 cacggccagt gcgccgcccg agagctccag gccgacaccc cgggcggcgg gatattcgcg
     4621 cagcaaggtg agcagcaggc agcccgaacc caggccgaga tcgaggatgc gccagggccg
     4681 ttgacggtcc ggcatcaggg ccagcgccgc ctcgatcagc gtctcgctgt cgggccgcgg
     4741 caccagcacg gccggcgaca ccttgaacgg caggccccag aactcgcgct cgcccaggac
     4801 ataggccatc ggttcgcgcc cgacccgccg tgccgtgagc gcgcgaaggg ccttggccac
     4861 gcccgccggc gcgggctcgg cgccgcgcgc gatcagctgc tcggccgaca ggccggcggc
     4921 gtgcgccagc agaagacggg cttcgaagcg aacgttgtcg atgccggcgg cggcgagggc
     4981 ggccgcggcg tcacgcaaca gcgcgtcgta ggttgcggta tgaccggggc taagaccggg
     5041 ggtcaggcag caatctccgc cagccgcccc gcctcgtcat cggcgatcag cgcgtcgatg
     5101 atctcgtcca gcgcgcggcc ctccatcacc tcgtcgagct tgtagagggt gaggttgatg
     5161 cgatggtcgg tgacgcggct ctgcgggaag ttgtaggtgc ggatgcgttc gctgcgatcg
     5221 ccgctgccaa cctggccctt gcggtcggcg gcgcgcgctt cgtcacggcg ctggcgctcg
     5281 gcgtcgtaga ggcgggcgcg caggatcttc atcgccttgg ccttgttctt gtgctggctc
     5341 ttttcatcct gctggctgac gaccaggccg gtcgggatat gggtgatgcg gaccgccgaa
     5401 tcggtggtgt tgaccgactg tccgccgggc ccggaggaac ggaagacgtc gatgcgcaga
     5461 tccttgtcgt cgatcttgat gtcgaattcc tcggcttccg gcagcaccgc cacggtcgcc
     5521 gccgaggtgt ggatgcggcc agaggcttcg gtcgccggca cgcgctgcac gcggtgcacg
     5581 cccgattcga acttcagccg ggcgaacacg ccgcggcccg agacggcggc gatcgcctcc
     5641 ttgtagccgc cgatgccggt gtcggagagc tccatgatct cgaagcgcca gccgtgctcg
     5701 gcggcgtaac gctggtacat gcgaaaaaga tcggcggcga acagggcggc ctcgtcgccg
     5761 cccgtcccgg cgcggatttc gaggatggcg ttcttctcgt cggcggcgtc cctgggcagc
     5821 agcatgcgct tcacggtgcg ctcgagctcg ggcaggcgct ttttcagcgc cgccgcctcc
     5881 tcctcggcca tcgccttcat atcgggatcg gccgccatgg cctcggcatc ctcgagctcg
     5941 cgctcggcct tgcgccattc gccgatggct tcgaccaggg gaccgagatc ggcgtattcc
     6001 ttggaggccg cgacaaactt ct
//
LOCUS       DASWGA010000362        11797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_672514, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000362 DASWGA010000000
VERSION     DASWGA010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 11797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11797
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672514"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..1588)
                     /locus_tag="VF991_08695"
     CDS             complement(104..1588)
                     /locus_tag="VF991_08695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEX9556559.1"
                     /translation="MILTDSQGFLKGAALAAVASLGLMLAQPAWAREAPQSFAELVDK
                     LMPTVVNITTTQNVPQQGPRLRDMPQLPPGSPFEELFKEFFDKRGGEEQKRRGTSLGS
                     GFIVDGEGYVVTNNHVIQGAEDITVILRDDTQLKAKLIGSDSRIDVALLKVEPPGKKP
                     LPAIKFGDSDKMRVGDWVIAIGNPFGLGHSVTAGIISARGRSLNDSLDDYLQTDAAIN
                     KGNSGGPLFNSDGEVIGVNTAIYSPSGTNAGLAFSIPSNLVKQVADQLREFGRVKRGW
                     VGVSYQSVTDDIADSFGLDRARGVLVANVVADGPAAKAGLKRNDIIISFAGQEVLDLR
                     RFPRLVANARVGSTVDLVVWRGGKEVPLKLRVGEQEEAEKQNAAAQGGTKKPAEPDQP
                     IVSTVEQLGLTLQKVTDQLREKYGLSDQAKGVVITKVAANSPAAEKQLQAGDIILEVD
                     QKPVTTPQEVTDIVTKLQQAKKRSVLLFVERQGDPRFAALRLTK"
     gene            complement(1809..2696)
                     /gene="hflC"
                     /locus_tag="VF991_08700"
     CDS             complement(1809..2696)
                     /gene="hflC"
                     /locus_tag="VF991_08700"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEX9556560.1"
                     /translation="MSNRMIIALIGLAVIAFLVTQTFYTVDPTKQVLVRQFGAIVGEP
                     KTEPGLYAKVPLVQDIQRIDRRLLDYEAEEFEIIAGDQKRLVVDAYARYKVVAAKLFA
                     QTVPGGEPALRGLLDSLINSEIRGVLSSVPLHAVLTDQRANLMDEITRRVNGKTKELG
                     VETVDVRIKRADLPQANSQSVFNRMKTDREREAGQLRAEGDEEKARITATADREVAVI
                     KADAGLKAQVTMGEADAEATRIYAQAFNKDKEFYGFWRRMEAYKQAFGAGGSTMVLSP
                     DTDFFRYFNAPSGAPPASK"
     gene            complement(2693..3895)
                     /gene="hflK"
                     /locus_tag="VF991_08705"
     CDS             complement(2693..3895)
                     /gene="hflK"
                     /locus_tag="VF991_08705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HEX9556561.1"
                     /translation="MAWNNNSGGPWGGGGNSGGPWGGGGGNRGGGGPFGSRRPPDMED
                     VIRRGQERLKNLIPGGFSSYKGIALVVLAAVVIWLVTGFFRVQPNQQAIQLVFGKPYG
                     KPVEPGLHYNLPGPIGNVVVVNVQDQRRVVIGSRGGQDRATAPYTRGPRPTSSENLML
                     TGDENIVDIEFAVLWQIKDVFKYAFDVRNPEDNVRAGAEAAMREVIGKSNLQYAQTEG
                     RSRIEQDTKDLLQKILDDYGLGVRVSQVQLLRVDPPQEVIAAFRDVQAARADKEKSIN
                     EANTYRNQVLPRAKGEAESIIQRGEAYKAQIIARASGDAQRFDQVYGQWAKAKDITTE
                     RLYLDTMEEVLRSVNKVLIDKNASGTGGVLPYLPLPELRSSQPAGGTSPPRQSPSGQT
                     PPAAGATR"
     gene            4035..5183
                     /gene="apbC"
                     /locus_tag="VF991_08710"
     CDS             4035..5183
                     /gene="apbC"
                     /locus_tag="VF991_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006137959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HEX9556562.1"
                     /translation="MAEISELAVRKVLETVIDPATGRSVVALGMVGGIATRSGHIAIT
                     LDVDPARGTALEPLRQACEQAVRAMPGVLSATAVLTSERPATPPPSAPPAHDHRHGHG
                     APAGKTTGGGGRIDVPGVKHIIAVASGKGGVGKSTTAVNLALGLAANGVSTGLLDADI
                     YGPSMPRMLDVKEKPESIDGKALKPIERYGLKTMSIGYIVNEDTPMIWRGPMVSSALE
                     QMLRDVEWGELDVLVVDMPPGTGDAQLTLAQRVALSGAVIVSTPQDIALVDARKGLNM
                     FRKVAVPVLGFVENMSFYLCPHCGERSEIFGHGGAREEAEKLGVPFLGEVPLHLDIRT
                     TSDSGHPIVVSQPDSPYAQIYKNIAGRVWKQLSAPQRGPRAAPRIVVR"
     gene            complement(5252..5803)
                     /locus_tag="VF991_08715"
     CDS             complement(5252..5803)
                     /locus_tag="VF991_08715"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEX9556563.1"
                     /translation="MARTPSPGRLRLLRERPRDDAAVEAMNEAAFGPDRQHKTVYRLR
                     EDVKPIKELCFVAIDHKGRMVASIRNWPILINERWPAILLGPLAIAPELRGLGYGKAL
                     MWHAMAQSRMLGHSRIILVGDPEYYNQFGFRRDLALNIQLPGWVEERRFLALELVAGS
                     MIGVHGMIGKAQPPKAAARRRKR"
     gene            complement(5796..6731)
                     /gene="thyX"
                     /locus_tag="VF991_08720"
     CDS             complement(5796..6731)
                     /gene="thyX"
                     /locus_tag="VF991_08720"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012555881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HEX9556564.1"
                     /translation="MPLSTDQQAEIDQARDGAEATLRPVAPALEEILFQALPALDHGF
                     VRVVDYMGDDAAVVQAARVSYGRGTKKVSEDRGLINYLMRHRHTTPFEMCEIKYHVKL
                     PIFVARQWIRHRTANVNEYSARYSILDNEFYIPKPEHLAAQSRQNRQGRDAVLAGKEA
                     ERVFNLLRRDAELVYEHYMEMLNEGETGAPLDPERSGLARELARMNLSLNFYTQWYWK
                     TNLHNLMHFLSLRADAHAQYEIRAYADIMIDTLRRWCPICHDAFMEYRMGGAHLSKTG
                     LAVIRRMIAGEKLDQKSSGLNPREWRELMAALGLG"
     gene            6809..7136
                     /gene="ssrA"
                     /locus_tag="VF991_08725"
     tmRNA           6809..7136
                     /gene="ssrA"
                     /locus_tag="VF991_08725"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01849"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="alphaproteobacterial-type; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01849"
     gene            7221..7778
                     /locus_tag="VF991_08730"
     CDS             7221..7778
                     /locus_tag="VF991_08730"
                     /inference="COORDINATES: protein motif:HMM:NF016286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /protein_id="HEX9556565.1"
                     /translation="MNDRFHYDALVDDALRSVVRRVLTQVADKGLPGSHHFYISFRST
                     DPGVMLPDYLRAKYPEEMTIVLQHQYWDLIIGPDSFEVTVSFNKLQERIKVPFTALSA
                     FVDPSVRFGLQFDRKDKAAASDKTGDKAEAATPTPLPAPEKRPSLAAPPTGEVKPEAG
                     AAEPAEAKPEDAAAKIVKLDSFRKK"
     gene            7842..9458
                     /locus_tag="VF991_08735"
     CDS             7842..9458
                     /locus_tag="VF991_08735"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008192229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEX9556566.1"
                     /translation="MPDFQFQEMFPSGKDATPYRKLSSDFVGTTKFNGRDVLTVEPEA
                     LTLLTAQAFKDISHLLRPGHLAQLRSILDDSEASANDKYVALELLKNANISAGGVLPM
                     CQDTGTAIVMGKKGQAVWTGGGDEAAIARGVYKTYTETNLRYSQVSPISMFKEVQTGT
                     NLPAQIDIFATDGDAYKFLFIAKGGGSANKSYLHQQTPAVLNESALLKFLDTQIRTLG
                     TAACPPYHLAIVIGGTSAEMNLKTVKLASTRYLDDLPSEGNDRGVAIRDREMEKQVLE
                     LTRQMGIGAQFGGKYFCHDVRVIRIARHGASVPIGIGVSCSADRQAVGKITKDGIFLE
                     QLETNPAHYLPEVEPQQLSGDVVSVDLNKGIAHTLSVLTKYPVKTRVKLSGTLIVARD
                     SAHAKLKERLDRGDGLPDYFKQFPIYYAGPAKTPHGMPSGSFGPTTAGRMDSYVDLFQ
                     ANGGSIVMLAKGNRSKQVVDACKKHKGFYLGSIGGPAAILAKNCIRKVEVLEYPELGM
                     EAIWRIEVENFPAFIVTDDKGNDFFSDLKI"
     gene            complement(9563..10111)
                     /locus_tag="VF991_08740"
     CDS             complement(9563..10111)
                     /locus_tag="VF991_08740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556567.1"
                     /translation="MIRAIIGTVAVLAGFAVVERSVDASTGYAGSCTSTEAYALLPRG
                     EAVLVRSEPTPQAAVLGTLSARRGAGGEQARLQVTIAGSQSGWARIALNTARDYSANG
                     AAQSFGWIPADLLTVDARVDGVITVYSRPGLMGQALTTIEGDDMKFRVLGCRGDWLQV
                     INARHGNVWIDKWCAREDGCRS"
     gene            10351..11025
                     /locus_tag="VF991_08745"
     CDS             10351..11025
                     /locus_tag="VF991_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9556568.1"
                     /translation="MNLAKPHLDVGLFSTKRDEQLVFWQQTVGLPYDHMGKLGGGMQQ
                     HRHHMNGSILKMNHSRDALPAAPPSGIVGLEIARQGLSAPQALSDPDGNKVRLVASGT
                     NGVQGIAILLRVHDPAQHDRFWTHAMQFERAGDGRYRCGDSLVVIAEQGKVERSPEWR
                     GPGYRYMTVQVWDCIAEYEGILARGGASGGAPRILGDTVRFAFVCDPDGNHIEISQRA
                     SLTGSL"
     gene            complement(11026..11382)
                     /locus_tag="VF991_08750"
     CDS             complement(11026..11382)
                     /locus_tag="VF991_08750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6481 family protein"
                     /protein_id="HEX9556569.1"
                     /translation="MKNRGTTFADRLETAAKAKQAQLARARAKDPTKDPEFAARQEAR
                     AAAAYVRQEREADRQIAKLAEREKEAAERDARKAEQVALEAERAGRVSRQQTVNMAAQ
                     KAARDARYAARKARKK"
     gene            complement(11393..>11797)
                     /locus_tag="VF991_08755"
     CDS             complement(11393..>11797)
                     /locus_tag="VF991_08755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003609134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEX9556570.1"
                     /translation="RGTIAGRRNGALIANDEGTAVAYALWNLEERGPMFIDPGVTVYK
                     GMLIGEHSLGNDLDVNALKGKQLTNIRAAGKDEAVRLTPPRRMSLEQAIAYIEDDELV
                     EVTPKSIRLRKRFLNPEDRKRARKQAAAAAAE"
BASE COUNT         1918 a         3935 c         3854 g         2090 t
ORIGIN      
        1 gaggctgggt gagggggtgt tgcaggaggc agccttcggt taccccctca cctaacctct
       61 cccccaaggg ggagaggaac atgagagtga aggaccgagc ggcttacttc gtcagtcgca
      121 atgccgcgaa gcgtgggtcg ccctggcgtt cgacgaacag caggaccgag cgtttcttgg
      181 cctgctgcag cttggtcacg atgtcggtga cttcctgcgg ggtggtgacc ggcttctggt
      241 cgacctcgag gatgatgtcg ccggcctgca gctgcttctc ggcggccggg ctgttggccg
      301 ccaccttggt gatgacgacg cccttggcct gatcggagag cccgtacttc tcgcgcagct
      361 ggtcggtgac cttctgcagg gtgaggccca gctgctcgac ggtcgagacg atcggctggt
      421 cgggttcggc cggcttcttg gtgccgccct gggccgccgc attctgcttc tcggcctcct
      481 cctgctcgcc gaccctgagc ttcagcggca cttccttgcc gccgcgccag accacgagat
      541 cgaccgtgct gccgacccgg gcattggcga ccagccgcgg gaagcggcgc agatcgagca
      601 cctcctggcc ggcgaagctg atgatgatgt cgttgcgctt cagccctgcc ttggcggccg
      661 ggccgtcggc cacgacgttg gccaccagca cgccgcgggc gcggtcgagc ccgaagctgt
      721 cggcgatgtc gtcggtgacg ctctggtagc tgacgccgac ccagccgcgc ttgacccggc
      781 cgaactcgcg cagctggtcg gcaacctgct tgaccaggtt ggacgggatc gagaaggcaa
      841 ggcctgcgtt ggtgccggag ggcgaataga ttgccgtgtt gacgccgatc acctcgccgt
      901 ccgagttgaa caacgggccg cccgagttgc ccttgttgat ggcggcgtcg gtctgcaggt
      961 agtcgtcgag cgagtcgttg agcgagcggc cgcgcgccga gatgatgccg gcggtcaccg
     1021 agtggcccag cccgaacggg ttgccgatgg cgatcaccca gtcgcccacg cgcatcttgt
     1081 cggaatcgcc gaatttgatc gccggcagcg gcttcttgcc cggcggctcg accttgagca
     1141 gcgccacgtc gatgcggctg tccgagccga tcagcttggc cttgagctgg gtgtcgtcgc
     1201 gcaggatgac ggtgatgtcc tcggcgccct ggatgacgtg gttgttggtg acgacgtagc
     1261 cttcgccgtc gacgatgaag cccgaaccca gcgaggtgcc gcggcgcttc tgctcctcgc
     1321 cgccgcgctt gtcgaagaac tccttgaaca gctcctcgaa cggcgagccg ggcggcagct
     1381 gcggcatgtc gcgcagccgg gggccctgct gaggcacgtt ctgggtggtg gtgatgttga
     1441 cgacggtcgg catcagcttg tcgaccagct cggcgaagct ttgcggcgcc tcgcgagccc
     1501 acgccggctg cgccagcatc agaccaaggg aagcaacggc cgccagcgcg gcacccttca
     1561 gaaagccttg agaatcagtg agaatcacgt ccgacctcca acggcgctca ggccaaacgg
     1621 gtcggaacgg ccggcgccgc gcgttcgagt cactgtgtac atgtacggcg attgtggcgc
     1681 aaataaagag gccgttatgt cgctgattgt ttcagctttt tcgggcgttt gagaaaaatc
     1741 agccgacggc gttgcaggct tgccacagac gccgccggtc cgtccggaat tgtcacagac
     1801 tttgccgcct acttgctggc tggcggcgct ccactggggg cgttgaaata gcggaagaaa
     1861 tcggtgtcgg ggctcagcac catggtcgag ccgccggcgc cgaacgcctg cttgtaggcc
     1921 tccatgcgac gccagaagcc gtagaactcc ttgtccttgt tgaaggcctg ggcatagatc
     1981 cgggtcgctt cggcgtcggc ctcgcccatg gtgacctgcg ccttcagccc agcatcggcc
     2041 ttgataacgg cgacctcgcg gtcggcggtg gcggtgatgc gcgccttctc ctcgtcgccc
     2101 tcggcgcgca gctggccggc ctcgcgctca cggtcggtct tcatgcgatt gaagaccgat
     2161 tgcgaattgg cctgcggcag atcggcacgc ttgatgcgca catcgaccgt ctcgacgccg
     2221 agttccttgg tcttgccgtt cacccgccgc gtgatctcgt ccatcaggtt ggcgcgctgg
     2281 tcggtcagca ccgcgtgcag cggcaccgag cttaagacgc cgcggatctc cgagttgatc
     2341 agcgagtcga gcagcccgcg cagcgccggc tcgccgcccg gcacggtctg ggcgaacagc
     2401 ttggcggcca ccaccttgta gcgggcatag gcgtcgacca cgaggcgctt ctggtcgccg
     2461 gcgatgatct cgaactcctc ggcctcgtag tcgagcagcc tgcggtcgat gcgctggata
     2521 tcctgcacca gcgggacctt ggcgtagaga ccgggttcgg tcttgggttc gcctacgatg
     2581 gcgccgaact ggcggaccag cacctgcttg gtcggatcga cggtgtagaa ggtctgggtc
     2641 accaggaagg cgatgacggc cagcccaatc agcgcgatga tcatacggtt gctcatcgcg
     2701 tcgctcccgc cgccggcggc gtctggcccg acggcgactg gcgcggcggc gacgttccgc
     2761 ccgccggctg gctcgatctc aactcgggca gcggcagata gggcagcacc ccgccggtgc
     2821 ccgaggcgtt cttgtcgatc agcaccttgt tcacgctgcg cagcacctcc tccatggtgt
     2881 cgaggtagag gcgctcggtc gtgatgtcct tggccttggc ccactggccg tagacctgat
     2941 cgaagcgctg ggcgtcgccg ctcgcgcggg cgatgatctg ggccttgtag gcctcgcctc
     3001 gctggatgat cgactcggcc tcgcccttgg cgcggggcag cacctggttg cggtaggtgt
     3061 tggcctcgtt gatgcttttc tccttgtcgg cgcgtgccgc ctggacgtca cggaaggccg
     3121 cgatcacctc ctgcggcggg tccacacgca ggagctggac ctgcgaaacg cgcacgccca
     3181 gcccgtagtc gtcgagaatt ttctgcaaaa ggtccttggt gtcctgctcg atgcggctgc
     3241 ggccctcggt ctgggcatat tgcaggttcg acttgccgat cacctcgcgc atggcggctt
     3301 cggcgccggc ccgcacgtta tcctccgggt tgcgcacgtc gaaggcgtac ttgaacacgt
     3361 ccttgatctg ccacagcacg gcgaactcga tgtcgacgat gttctcgtcg ccggtcagca
     3421 tcaggttctc gctcgaggtc gggcgcgggc cgcgcgtgta gggcgcggtg gcgcggtctt
     3481 gaccgccgcg cgagccgatc acgacgcggc gctggtcctg gacgttgacc accacgacgt
     3541 tgccgatcgg ccccggcagg ttgtagtgca ggccgggttc gaccggcttg ccgtagggct
     3601 tgccgaatac gagctggatc gcctgctggt tgggctgcac gcggaagaag ccggtgacca
     3661 gccagatcac cacggccgcc agaacgacca gcgcgatccc cttgtacgag ctgaagccgc
     3721 cggggatgag gttcttgagc cgctcctggc cccggcggat aacgtcttcc atgtcgggcg
     3781 ggcgacgcga gccgaaagga ccacccccgc cgcgattgcc gccgccgccg ccccacgggc
     3841 cgccgctatt gccgccgccg ccccaggggc ctccggagtt gttgttccac gccatcgttc
     3901 acctcgggcc gccggctgcc tcgcctgggc gcattgtcgc ttttgatttc acgtcgcgct
     3961 gcatatatgt gaccgcagca acccctgcaa tcaagcagcg acacaatatt gccggcccgc
     4021 ggaaacaagc aatcatggcg gaaatatccg aattagcggt ccgtaaggtt ctcgagacgg
     4081 tcatcgatcc agcgaccggc aggagcgtcg tggcgctggg catggtgggc ggtatcgcca
     4141 cccgcagcgg ccatattgcg atcaccctgg atgtcgatcc ggcgcgcggc accgccctgg
     4201 aaccgttgcg gcaggcctgt gagcaggcgg tgcgggccat gccgggcgtg ctgtcggcaa
     4261 ccgccgtgct gacctccgaa cgcccggcca cgccgccgcc ttccgcaccc cccgcgcacg
     4321 atcatcgaca tggccatgga gcgccggccg gcaagaccac cggcggtggc ggccgcatcg
     4381 acgtgcccgg cgtcaagcac atcatcgccg tcgcctcggg caagggcggc gtcggcaaat
     4441 cgaccacggc ggtgaacctg gcgctggggc ttgccgccaa cggcgtcagc accggcctgc
     4501 tcgatgccga catctacggc ccgtcgatgc cacgcatgct cgacgtcaag gaaaagcccg
     4561 aatcgatcga cggcaaggcc ctgaagccga tcgagcgcta tgggctcaag accatgtcga
     4621 tcggctatat cgtcaacgag gacacgccaa tgatctggcg tgggcccatg gtgtcgagcg
     4681 cgctcgagca gatgctgcgc gacgtggagt ggggcgagct cgacgtgctg gtggtcgaca
     4741 tgccgccggg caccggcgat gcccagctca cgctcgccca gcgggtggcg ctgagcggcg
     4801 ccgtcatcgt ctcgacgccg caggacatcg ccctggtcga cgcgcgcaag ggcctcaaca
     4861 tgttccgcaa ggtcgcggtg ccggtgctgg gcttcgtcga gaacatgagt ttttacctct
     4921 gcccgcattg cggcgaacgt tcggagatct ttggccacgg cggcgcgcgc gaggaagccg
     4981 aaaagctcgg cgtgccgttc ctgggcgagg tgccgctgca cctcgacatc cgcaccacct
     5041 cggattcggg ccatcccatc gtcgtctccc aacccgacag cccgtacgcc cagatctaca
     5101 agaacatcgc cggccgggta tggaagcagc tttcggctcc ccagcgcggg ccccgcgcgg
     5161 cgccgcgcat cgtggtgcgt tagctggagc gcggacctcc aggtccgcat tcatgatcat
     5221 gagcgggcct ggaggcccgc gctccgaaga actaacgctt ccgccgccgg gccgcggctt
     5281 tgggcggctg cgccttgccg atcatgccgt gcacgccgat catcgagccg gcgaccagct
     5341 cgagcgccag gaagcggcgt tcctcgaccc agccgggaag ctggatgttg agggcgaggt
     5401 cgcggcggaa gccgaactgg ttgtaatact ccggatcgcc gaccaggatg atgcggctgt
     5461 ggcccagcat gcgcgactgc gccatcgcgt gccacatcag cgccttgccg taacccaggc
     5521 cacgcagctc cggcgcgatg gcgagcggcc ccagcaggat cgcgggccag cgttcgttga
     5581 tcaggattgg ccagttgcgg atcgaggcca ccatgcggcc cttgtggtcg atggcgacaa
     5641 agcagagttc cttgatcggc ttcacgtcct cgcgcaggcg atagacggtc ttgtgctggc
     5701 ggtcgggacc gaacgccgcc tcgttcatcg cctcgaccgc ggcgtcgtcg cgcggccgct
     5761 cgcgcagcag gcgcagccgg ccgggactgg gcgtcctagc caaggccgag cgccgccatc
     5821 agttcgcgcc attcgcgggg attgaggccg ctcgatttct ggtcgagctt ttcgccggcg
     5881 atcatgcgcc tgatgacggc aaggccggtc ttcgacaggt gtgcgccgcc catgcggtat
     5941 tccatgaaag cgtcgtggca gatcgggcac cagcgcctga gcgtgtcgat catgatgtcg
     6001 gcataggcgc gaatctcgta ctgggcgtgg gcgtcggcgc gcagcgacag gaaatgcatg
     6061 agattgtgca ggttggtctt ccagtaccac tgcgtataga aattgagcga caggttcatg
     6121 cgcgcaagct cgcgcgccag gcccgagcgt tccgggtcga gcggcgcgcc ggtctcgccc
     6181 tcgttcagca tctccatgta atgctcgtag accagctcgg cgtccctgcg cagcaggttg
     6241 aagacgcgct cggcctcctt gccggccagc acggcgtcgc ggccctggcg gttctgccga
     6301 ctctgggcgg cgaggtgttc gggcttgggg atgtagaact cgttgtcgag gatggaatag
     6361 cgcgcggaat actcgttcac gttggcggtg cgatggcgga tccactggcg cgccacgaag
     6421 atcggcagct tcacgtggta cttgatctcg cacatctcga acggcgtcgt gtggcggtgt
     6481 cgcatgagat agttgatcag gccacggtcc tcgctcacct tcttggtgcc gcggccgtag
     6541 ctcacgcggg ccgcctgcac gacggcggcg tcgtcaccca tgtaatcgac gacccggacg
     6601 aagccgtgat cgagagccgg cagcgcctgg aacagaatct cctccagcgc cggcgcgacc
     6661 ggccgcaggg tcgcctcggc gccatcgcgc gcctggtcga tttcagcctg ctggtcggtg
     6721 gagaggggca tcgttcttgt ccttcgttgg ccgcggactc tatgggcggc gggcgggcgc
     6781 ttccatgggg aaattgaggc acatcccttg ccttcaaaaa cgcccgcgga acgcctatat
     6841 taaatttgtc gggaaaccga ctatggcgat aaacgccgcg tggaataagc gtttcggacc
     6901 cgggggcagt acccggcgcc tccaccattt ctcctccgca ccttcgggga cggagtcgat
     6961 gggggcgaac caggatcgac gggcgtggta aaggcgcggt ttttgctcgg tatggttccg
     7021 ccgtgacggg ccattcacaa gtgctaacga taacaccgtt acactcgctg ctgccgccta
     7081 aacagcggac gtaagcgcgg tccgggaggg caccgggcaa cagaagccct cccactttct
     7141 ttcaagtgat ttgccggcta ttggcagcgt tgactctccc gccatgcggg ccgatgcttt
     7201 ccgcgaattt ccgacaggcc atgaacgatc gctttcacta cgacgctctc gtcgacgatg
     7261 cgctgcgcag cgttgtccgc cgcgtgctga cgcaagtcgc cgacaaaggc ctgcccggct
     7321 cgcaccattt ctacatctcg ttccgaagca ccgaccccgg cgtgatgctg cccgactatc
     7381 tgcgggccaa ataccccgaa gagatgacga tcgtgctcca gcaccagtac tgggatctca
     7441 tcatcggccc ggactccttc gaggtgacgg tgagcttcaa caagctgcag gagcgcataa
     7501 aggtgccgtt caccgcgttg tcggcgttcg tcgatccctc ggtccgcttt ggactgcaat
     7561 tcgaccgcaa ggacaaggcg gctgcgtccg acaagaccgg cgacaaggcc gaggcagcca
     7621 ccccgacgcc gctgccggcg ccggagaaac ggccgtcgct cgccgctccc cccaccggtg
     7681 aggtcaagcc ggaagccggc gcggcggagc ctgcggaggc caagccggaa gacgcggccg
     7741 ccaagatcgt caagctcgac agcttccgaa agaagtagct agacgccgcg gccgggctgc
     7801 ggcagggatg cgcgccttca ggcgcgccag gagacagagt catgcccgat ttccagttcc
     7861 aggagatgtt ccccagcggc aaggacgcca ccccctaccg caagctctcc tccgatttcg
     7921 tcggcacgac caagttcaac ggccgcgacg tgctgacggt cgagcccgag gcgctcaccc
     7981 tgctgaccgc ccaagccttc aaggacatct cccacctgtt gcgtccgggc cacctcgccc
     8041 agctgcgctc gatcctcgac gactccgagg cctcggccaa cgacaagtac gtggcgctcg
     8101 aacttctgaa gaacgccaac atctcagccg gcggcgtgct gccgatgtgc caggacaccg
     8161 gcaccgccat cgtcatgggc aagaagggcc aggcggtatg gacgggcggc ggcgacgagg
     8221 cggcgatcgc ccggggcgtc tacaagacct acaccgagac caacctccgc tactcgcagg
     8281 tctcgccgat ctcgatgttc aaggaggtgc agaccggcac caacctgccg gcgcagatcg
     8341 acatcttcgc gaccgacggt gatgcctaca agttcctgtt catcgccaag ggcggcggct
     8401 cggccaacaa gagctacctg caccagcaga cgccggcggt gttgaacgaa tcagcgctcc
     8461 tgaagttcct cgatacccag atccgcacct tgggcaccgc ggcctgcccg ccctatcacc
     8521 tggcgatcgt gatcggcggc acctcggccg agatgaacct caagacggtg aagctcgcct
     8581 cgacgcgcta tctcgacgac ctgccgagcg agggcaacga ccggggcgtc gccatccgcg
     8641 accgcgagat ggaaaagcag gtgcttgagc tcacccgcca gatgggaatc ggcgcgcagt
     8701 tcggcggcaa atatttctgc catgacgtgc gggtgatccg catcgcccgc cacggcgcct
     8761 cggtgccgat cggcatcggt gtgtcgtgct cggccgaccg ccaggcggtg ggcaagatta
     8821 ccaaagacgg catcttcctc gagcagctcg agaccaatcc ggcgcactac ctgccggaag
     8881 tcgaaccgca gcagctctcc ggtgacgtcg tctcggtcga cctcaacaag ggcatcgccc
     8941 acacgctctc ggtgctgacc aaatatccgg tgaagacgcg cgtcaagctc agtggcactt
     9001 tgatcgtggc tcgcgattcg gcgcacgcca agctcaagga acggctcgac cgcggcgacg
     9061 gcctgccgga ctatttcaag cagttcccga tctactatgc cggccccgcc aagacaccgc
     9121 acggcatgcc gtcgggctcc ttcggcccca ccaccgcggg ccgcatggat tcctacgtcg
     9181 atctgttcca ggccaatggc ggttcgatag tgatgctggc caagggcaat cgcagcaagc
     9241 aggtcgtcga cgcctgcaag aagcacaagg gcttctatct cggctcgatc ggcgggccgg
     9301 ccgccatcct cgccaagaac tgcatcagga aggtcgaggt gctggaatat cccgagctcg
     9361 gcatggaggc gatctggcgc atcgaggtcg agaacttccc ggccttcatc gtcaccgacg
     9421 acaagggcaa cgactttttc agcgacctga agatctgaca aagagaaccc cggaaggtta
     9481 ccctcccggg gtcggtcttg ctgtcccgcg gcgatccgcc aaatccccag atagcggtcg
     9541 ccgcctccct aaactcgttg cgtcagctgc ggcagccgtc ctcgcgcgcg caccacttgt
     9601 cgatccagac attgccgtgg cgcgcgttga tcacctgcag ccagtcgccg cggcagccca
     9661 gcacgcggaa cttcatgtcg tcgccttcga tggtcgtgag cgcctggccc atcaggccgg
     9721 gccggctata gaccgtgatg acgccgtcga cccgcgcatc gacggtgagc aggtcggccg
     9781 ggatccagcc aaaggactgc gcggcgccat tggcgctgta gtcgcgcgcc gtgttgagcg
     9841 caatgcgcgc ccagccgctt tgactgccgg caatggtgac ctgcaggcgc gcctgttcgc
     9901 cgccggcgcc gcgtcgggcc gacagcgtgc cgagcaccgc tgcttgcggc gtcggctcgc
     9961 tgcgcacgag caccgcctcg ccgcgcggca agagcgcata ggcctctgtt gacgtgcatg
    10021 aaccggcata gccggtactg gcgtcgaccg aacgctcaac gacggcgaag cccgcaagca
    10081 cggcaaccgt gccgataatg gcgcgaatca tcggtatttc cttcccacat tgtgtcggcc
    10141 gctccccagc aaccgacccc ttcacccgcc gcccttctag caaccgcagt gccgtgaagt
    10201 cgtgtcgcgg tttgtatgag ttgtttcacg atgcgcgacg agacggaatg gcgatttcca
    10261 ctgatgattc aatacactca cgcccgtagt tgaagtgcaa cgtcagaagc tctccaacct
    10321 tttccccagc ttcgcgctac acttccggcc atgaatctcg ccaaaccgca tctcgacgtc
    10381 ggactcttct ccaccaagcg cgacgagcag ctcgtcttct ggcaacagac ggtaggcctg
    10441 ccctacgacc acatgggcaa gcttggcggc ggcatgcagc agcaccgcca tcacatgaac
    10501 ggctcgatcc tgaagatgaa ccattcgcgc gacgcgctgc cggccgcgcc gccttcgggc
    10561 atcgtcggcc tggagatcgc ccgccagggg ctcagcgccc cgcaggcgct gagcgacccc
    10621 gacggcaaca aggtcaggct cgttgccagc ggcaccaacg gcgtgcaagg catcgccatc
    10681 ctgctcaggg tccacgatcc cgcccagcat gaccgcttct ggacgcacgc catgcagttc
    10741 gagcgcgccg gcgatggccg ctatcgctgt ggtgactcgc tggtcgtgat cgccgagcag
    10801 ggcaaggtcg agcgcagccc cgagtggcgt gggccgggat atcgctacat gacggtgcag
    10861 gtgtgggatt gcatcgccga atacgagggc atcctggcgc gcggcggggc gtcgggcggc
    10921 gcgcccagga tcctgggcga tacggtgcgc tttgctttcg tctgcgatcc cgacggcaat
    10981 cacatcgaga tcagccagcg cgcttccctg acgggcagcc tatagctatt tcttgcgtgc
    11041 cttgcgcgcc gcataacggg catcgcgcgc cgccttctgc gcggccatgt tgactgtttg
    11101 ctggcgcgag acgcggccgg cgcgttcggc ctcgagggcc acctgctcgg ccttgcgggc
    11161 atcgcgttcg gcggcttcct tctcgcgttc ggcgagcttg gcgatctggc gatcggcctc
    11221 acgctcctgg cgcacatagg ccgcggcggc gcgcgcctcc tggcgggcgg cgaattcggg
    11281 atccttggtg gggtccttgg cccgcgcccg cgccagctgg gcctgcttgg ctttggcggc
    11341 ggtctccaga cggtcggcga aggtcgtgcc ccggtttttc aatggatcgt ccctattctg
    11401 cggccgcagc ggcagcctgt ttcctggcgc gcttgcggtc ctcgggattg aggaaacgct
    11461 tgcgcagcct gatcgacttc ggcgtcactt cgaccagttc gtcatcctca atatacgcga
    11521 tcgcctgctc gagcgacatg cgccgcggcg gggtgagtcg caccgcctcg tccttgccgg
    11581 cggcacggat gttggtgagc tgcttgccct tcagcgcatt gacgtcgaga tcgttgccca
    11641 ggctgtgctc gccgatcagc atgcccttgt agaccgtcac acccggatca atgaacatcg
    11701 ggccgcgttc ctcgaggttc cacagggcgt aggccaccgc ggtgccctcg tcgttggcga
    11761 tcagcgcgcc gttgcgccgg ccggcgatcg tgccgcg
//
LOCUS       DASWGA010000363         1809 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2072091, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000363 DASWGA010000000
VERSION     DASWGA010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1809
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2072091"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..579)
                     /locus_tag="VF991_08760"
     CDS             complement(<1..579)
                     /locus_tag="VF991_08760"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9556571.1"
                     /translation="MRPVFDPSAVHRLKHRGAVDADGHVLEDAGLWDHYIEAKYRDRA
                     LRLKRDADGLEYLEIGGQPSKRTRKGYPATLGRMGQKDLDAFKPHPDKTYAANMPYGA
                     CDAGERVKLLDAEGLDAAVLYPTLGILWEAELSDTELSQAYCRAYNRWIADFCRDSQG
                     RLIAIAHLSLGDPVAAAAELERAVKDGCRGAFV"
     gene            complement(579..1133)
                     /locus_tag="VF991_08765"
     CDS             complement(579..1133)
                     /locus_tag="VF991_08765"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9556572.1"
                     /translation="MARALKKHPIFVTERLRLRPFRGNDLKVLHALYGDADNLRFWGV
                     SPSPDLTATGRMLRWHLPFRPRDYVLWALEEKKSRKVVGMINYHRRELREKRVDVGWL
                     LLPQHQGKGYMAEAGRALLRHLFDDLRVHKVEAFIRPENEPSAALARRLGFRLEGGPI
                     RDRWFVSGRWHSVMLYGLIAGEER"
     gene            1161..>1809
                     /locus_tag="VF991_08770"
     CDS             1161..>1809
                     /locus_tag="VF991_08770"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF012585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HEX9556573.1"
                     /translation="MTKRIGILTSGGDCAGLNATIRAVALRAHHGYGWTTVGIRYGTL
                     GLLERPVEAVTIDTHRLDAALARQGGTFLGSTNRGDPFAFPMEDRSLKDRSGEMIEGL
                     ASLQLDGLIGVGGDGSLDILRRLFARSTVAFIGIPKTIDNDVANTERAVGYSTAVAIA
                     TEALDRLHPTGASHERVMVLEVMGRDAGHIAIAAGIAGGADVVLIPEVPWRLERVV"
BASE COUNT          294 a          608 c          615 g          292 t
ORIGIN      
        1 gacgaaggcg ccgcggcagc cgtccttcac cgcgcgctcg agctcggcgg cggccgcgac
       61 cggatcgccg agcgagagat gggcgatcgc gatcaggcgg ccctgcgaat cgcggcagaa
      121 atcggcgatc cagcgattgt aggcgcggca gtaggcctgg ctcagctccg tatcggaaag
      181 ctcggcctcc cacaggatgc cgagcgtggg atagagcacc gccgcgtcca gcccttcggc
      241 gtcgagaagt ttcacgcgct cgcccgcatc gcaggcgccg tacggcatgt tggcagcgta
      301 ggtcttgtcg ggatgcggct tgaaggcgtc aagatccttc tggcccatgc ggcccagggt
      361 ggcgggataa cccttgcgcg tgcgcttgct cggctggccg ccgatctcga gatattccag
      421 gccgtcggca tcgcgcttca ggcgcagcgc gcggtcgcgg tacttggcct cgatgtagtg
      481 gtcccacaga ccggcgtctt cgagcacgtg gccgtcggca tcgacggcgc ccctgtgctt
      541 caggcgatga accgcgctgg gatcgaatac cggtcgcatt accgttcctc cccggcgatc
      601 aggccgtaga gcatgacgct atgccagcgg ccggagacga accagcggtc gcggatcggc
      661 ccgccctcca ggcgaaatcc caggcggcgg gcgagcgccg ccgatggttc gttctccggc
      721 cgtatgaacg cctcgacctt gtgcacccgc agatcgtcga acagatggcg cagcaaagcg
      781 cgaccggctt cggccatgta gcctttgccc tgatgctgcg gcagcagcag ccagccgacg
      841 tcgacgcgct tctcgcgcag ctcgcgccgg tgatagttga tcatgccgac caccttgcgg
      901 ctctttttct cttcgagagc ccacaacaca tagtcgcgcg gccggaaggg caggtgccag
      961 cgcagcatgc ggcccgtcgc ggtaagatcg gggctgggcg atacgcccca gaagcggaga
     1021 ttgtccgcat cgccatagag cgcatgcagg accttgagat cgttgccgcg aaacggccgc
     1081 agtcgcagcc gttccgtaac aaatatcggg tgtttcttca gagcgcgggc catttgctag
     1141 actaggcgtg gaggcgttgc atgaccaagc gaatcggcat cctgaccagc ggcggcgatt
     1201 gcgccggcct caacgccacg atccgcgccg tggcgctgag agcgcatcac ggctacggct
     1261 ggacgacggt gggcatccgc tacggcacgc tgggcctgct ggagcggccg gtcgaggcgg
     1321 tgacgatcga tacccatcgg cttgacgccg cgctggcgcg ccagggcggc acgttcctcg
     1381 gcagcaccaa ccgcggcgat cccttcgcct ttccgatgga ggaccgcagc ctgaaagatc
     1441 gctcgggcga gatgatcgag gggctggcaa gcctgcagct cgacgggctg atcggcgtcg
     1501 gcggcgacgg cagcctcgac attctgcgcc gcctgtttgc gcgctccacc gtcgccttca
     1561 tcggcattcc caagaccatc gacaacgacg tcgccaatac cgagcgcgcc gtcggctact
     1621 cgacggccgt cgccatcgcc accgaggcac tcgatcgcct gcatccgacc ggcgccagcc
     1681 acgagcgggt catggttctg gaggtgatgg gccgcgacgc gggccacatc gccatcgccg
     1741 cgggcatcgc gggcggcgcc gatgtcgtgc tgatccccga agtgccgtgg cgcctggagc
     1801 gcgtggtcg
//
LOCUS       DASWGA010000364         2909 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_166878, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000364 DASWGA010000000
VERSION     DASWGA010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166878"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1556
                     /locus_tag="VF991_08775"
     CDS             <1..1556
                     /locus_tag="VF991_08775"
                     /inference="COORDINATES: protein motif:HMM:NF024767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9556574.1"
                     /translation="ETVSLPPTLHGLLLSRVDKLPAESRRVLQAAAVLGVSFDEVLLQ
                     AVAGDARMALERLVEVDLVRDVGQGHDGRRYRFAHALVHEVVYENLLLSRRSELHERA
                     GRALEAAVGPSPSRLSDLEALGHHWSFTSDKAKGARYLTAAGDRSRAVYANDDAIRHY
                     ERALATLASCLACDDQIRIVRERLADLLALTGKRADALAHYEAVRQELEAAGDGAGAA
                     RLYRKIGGLHWETGDRERAKACFAAGIDRLGDAGDPIERAQLYQEIGRLAFRAGDNAG
                     AITWAERALAEAARADASPPDSERMRERAATQAQAYNTLGVALARTGQPQQAVDRIEQ
                     SIALAESHDLLQATCRGYTNLSVLQSSLDPPRSIETCLRGLEVARKVGDLAFQSRLQA
                     NLAVAYCALTDRCEAEGIEAAETAIDLDRRLGLLDHLAVPLIVLGQIRQCHGDHGPAL
                     ASYQEALALAEQVGEPQLLFPCYDGLATLYLDAGDGAKAELYLAKAQDVCERAGVEPD
                     ALLVLPFLC"
     gene            1577..2236
                     /locus_tag="VF991_08780"
     CDS             1577..2236
                     /locus_tag="VF991_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011969250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEX9556575.1"
                     /translation="MNATREMLSPVPPGAQAPDFALAAIDGSGTISLEDYRGKSPLFL
                     ALFVGLWCPFCRRSIAEMAATEPALKAQGVETLCVVATPPDNARLYFKYRPTRLRLAA
                     DPELTTHRAYGVPKPVPTPELMTAIETLRINPDGVLPEPLPIAQAAEAVGKLDGYAGS
                     QTDQADMQRQWPQLKGQFLIDRDGIVRWANIECATEGLAGMGKFPSRDEILTAARTLG
                     G"
     gene            complement(2456..>2909)
                     /locus_tag="VF991_08785"
     CDS             complement(2456..>2909)
                     /locus_tag="VF991_08785"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9556576.1"
                     /translation="GGMDVVHVPYKGGAPAIQDVIANNVAWSFETFSTTLPLHRAGKL
                     RILAFCHAKRATIAPEIPTMIEAGVPGYEAYTFSLILGPAGMPQEVIDTLDKASRQAM
                     ADPSTIKFLEGNAAIPTPETTPERTAQFIKDELAKWAPIIRDANVKIA"
BASE COUNT          438 a          985 c         1028 g          458 t
ORIGIN      
        1 tcgagacggt cagcctgccg cccacgttgc acggcctgct gttgtcgcgc gtcgacaagc
       61 tgccggccga gtcaaggcgc gtgctgcagg cggccgccgt gttgggcgtg agctttgacg
      121 aggtgctgtt gcaggcggtc gcgggcgacg cgcggatggc gctggagcgt ctggtcgagg
      181 tcgacctggt gcgcgacgtg gggcaaggcc atgatggccg gcgctatcgc ttcgcgcacg
      241 cgctggtgca cgaagtggtc tacgagaact tgctgctgtc gcgccgcagc gagttgcacg
      301 aacgagccgg ccgcgcgctt gaagcggccg tcggcccgtc gccgtcgcgg ctgagcgacc
      361 tcgaggcgct gggccaccac tggagtttca cctcggacaa ggccaagggc gcccgctacc
      421 tgacggcggc cggtgaccgc tcgcgcgcgg tctatgccaa cgacgacgcc atccgccact
      481 acgagcgggc ccttgccacg ctcgcgagct gccttgcctg cgacgaccag atccgcatcg
      541 tgcgcgagcg gctggccgac cttctagcgc tcaccggaaa gcgcgccgac gctctggcgc
      601 actacgaggc cgtgcgccag gagctcgagg cggcagggga cggcgccggc gcggcgcgcc
      661 tctaccgcaa gatcggcggg ctgcattggg agaccggcga ccgcgagcgc gccaaggcct
      721 gcttcgccgc cggcatcgac cggctgggcg atgcgggcga tcccatcgag cgcgcccagc
      781 tctaccagga gattggtcgc ctggcctttc gcgccggcga caatgcgggc gccattacct
      841 gggccgagcg ggcgcttgcc gaggcggcgc gggcggacgc gtcgccgccc gacagcgagc
      901 gcatgcgcga gcgggcggcg acgcaggcgc aggcctacaa cacgctgggc gtggcgctgg
      961 cgcggacggg ccagccgcag caggcggtcg acaggatcga gcagagcatc gcgctcgccg
     1021 agagccacga tctgctgcag gcgacctgcc gcggctacac caacctcagc gtgctccaga
     1081 gctcgctcga tccgccgcgc agcatcgaga cctgcctgcg cgggctcgag gtcgccagga
     1141 aggtcggcga tctcgccttc cagtcgcggc tgcaagccaa cctggcggtg gcctactgcg
     1201 cgctcaccga tcgctgcgag gcggagggca tcgaggcggc ggaaaccgcc atcgacctcg
     1261 accgccggct cggcctttta gaccatctcg ccgtgccgct gatcgtgttg ggccagatcc
     1321 gccagtgcca cggcgaccac gggccggcgc ttgcctccta ccaggaggcg ctggcgctgg
     1381 ccgagcaggt cggcgagccg caactcctgt ttccctgcta cgacggactt gctacgcttt
     1441 acctcgatgc cggggacgga gcgaaggccg agctctacct ggcgaaggca caggacgtct
     1501 gcgaacgggc cggtgtagag cccgacgcgc tcctggtcct gccgtttctt tgctgacagg
     1561 gggacggagg cttcacatga atgctacccg cgaaatgctg tcaccggtgc cgccgggcgc
     1621 gcaggcgccc gatttcgcgc tcgccgccat cgacggaagc ggcaccatct cgctcgagga
     1681 ctatcgcggc aagagcccgt tgtttctcgc cctgttcgtc gggctgtggt gcccgttctg
     1741 ccggcgctcg atcgccgaga tggcggcgac cgagccggcc ctgaaggcgc agggcgtcga
     1801 gacgctgtgc gtcgtggcca cgccgccgga caatgcgcgg ctctatttca agtatcgccc
     1861 gacgcgcctg cgcctggcgg ccgatccgga gctcactacg catcgcgctt atggcgtgcc
     1921 caagcccgtg ccgacgcccg agctcatgac ggcgatcgag acccttcgca tcaatccgga
     1981 cggagttctt cccgagccgc tgccgatcgc acaagcggcc gaagccgtcg gcaagctcga
     2041 cggctatgcc ggcagccaga ccgaccaggc cgacatgcag cggcagtggc cgcaactcaa
     2101 gggccagttc ctgatcgacc gcgacggcat cgtgcgctgg gccaacatcg aatgcgccac
     2161 tgaaggcctg gccggcatgg gcaaattccc gtcgcgcgac gagatcctga cggcggcgag
     2221 gactttgggc ggctaggcat attccgttcg agtgtcttgc cggactcggc gcattcacat
     2281 gcgcctgagg gccttcaggc ccgctcatga tcttccggac cgcgggcgtc tcgcccgctc
     2341 atgatcatga ggcgcgcgag acgcgcgcgg tccggataat catgacgcgc cacggagtgg
     2401 cgcgctccca gcaaagatga agatcatgag cgggcgcgcc aggcgtcagg gcccgctagg
     2461 cgatcttgac gttggcgtcg cggatgatcg gcgcccactt ggcaagctcg tccttgatga
     2521 actgtgccgt tcgttcaggc gtggtttccg gcgtgggaat ggcggcgttg ccctcgagga
     2581 acttgatggt cgaggggtct gccatggcct ggcggctcgc cttgtcgagc gtgtcgatca
     2641 cctcttgcgg catgccggca ggaccgagga tgaggctgaa ggtgtaggcc tcgtagcccg
     2701 gcacgccggc ctcgatcatg gtcgggatct cgggtgcgat cgtggcgcgc ttggcatggc
     2761 agaacgccag gatcctgagc ttgcccgccc ggtgcagcgg cagcgtcgtg ctgaaggtct
     2821 cgaaggacca ggcgacgttg tttgcaatca cgtcctggat ggccggtgcg ccgcccttgt
     2881 agggcacgtg caccacgtcc atcccgccg
//
LOCUS       DASWGA010000365         2092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1305483, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000365 DASWGA010000000
VERSION     DASWGA010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1305483"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VF991_08790"
     CDS             complement(<1..459)
                     /locus_tag="VF991_08790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9556577.1"
                     /translation="MSDTGIGASVRRKEDFRFLTGQGTYTDDINRPGQLHAYILRSPH
                     AHARIKSIDVSAAAKASGVVAIFTGKDLAADNVGGLPCGWQIHSKDGSPMVEPPHPAL
                     AVDRVRHVGDQVAIVIADSKSEARDAAELIGVDYEPLKAVVASVDALKKGA"
     gene            complement(456..932)
                     /locus_tag="VF991_08795"
     CDS             complement(456..932)
                     /locus_tag="VF991_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9556578.1"
                     /translation="MSTAVKMTVNGKAASGTVEARTLLVQFLRETLGLTGTHVGCDTS
                     QCGACVVEVDGRSVKSCTMLAVQAEGAKVITIEGLANGELHPMQAAFRENHGLQCGFC
                     TPGMVMSAIDLVKHNKDPSETEIREWLEGNICRCTGYHNIVKSIKAGAAAMRGATK"
     gene            complement(1065..1700)
                     /locus_tag="VF991_08800"
     CDS             complement(1065..1700)
                     /locus_tag="VF991_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HEX9556579.1"
                     /translation="MDMNGEYQIAAPRQRVWEALNDPEVLRQCIPGCEEIVKLSDVEW
                     TAKVTAKVGPVKAKFGGKVTLSDLDPPNGYTITGEGTGGAAGFAKGGAAVKLVDQGDG
                     TLLSYTVKAQVGGKLAQIGSRLIDGASRKMAEEFFGNFAARLGVPVAGDGTAETAGPA
                     APGTVPPTEPVAAAPIKPAPEADRGGNRLSPLVWVGGLVVVIIVILLAFTR"
     gene            1780..>2092
                     /locus_tag="VF991_08805"
     CDS             1780..>2092
                     /locus_tag="VF991_08805"
                     /inference="COORDINATES: protein motif:HMM:NF028290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEX9556580.1"
                     /translation="MPAGIGAALGVAWTFPFAGLLLSIAVAPLVAPQPWHRHYGKIAS
                     FWAAAFVLPFAVVYGAPVAAHALLKAFLHEYLPFVVLLGALYTVAGGVRLTGTLRGTP
                     VV"
BASE COUNT          316 a          709 c          673 g          394 t
ORIGIN      
        1 cgcgcccttc ttgagcgcat cgacgctcgc gacgaccgct ttcaggggct cgtaatcgac
       61 gccgatgagc tcggcagcgt cgcgcgcctc gctcttgctg tcggcgatga cgatggcgac
      121 ctggtcgccg acatgacgga cccgatcgac ggcgagagca gggtgcggcg gctcgaccat
      181 cggcgagccg tccttggaat ggatctgcca gccgcagggc aggccgccga cattgtcggc
      241 cgccagatcc ttgccggtaa agatggcgac gacgccagag gccttggcgg ccgcgctgac
      301 gtcgatgctc ttgatccgcg catgcgcatg cggactgcgc aggatatagg cgtggagctg
      361 ccccggccgg ttgatatcgt ccgtataggt cccctgaccg gtgaggaaac ggaaatcttc
      421 cttgcggcga acggaggcgc cgatgccggt gtcgctcatt tggtcgcccc ccgcatggcg
      481 gcggcgccgg ctttgatcga tttgacgata ttgtggtagc cggtgcagcg gcagatgttg
      541 ccctcgagcc actcgcggat ctcggtctcg ctcggatcct tgttgtgctt cacgagatcg
      601 atcgcgctca tcaccatgcc gggcgtgcag aagccgcatt gcagcccatg attctcgcgg
      661 aaagcggcct gcattggatg aagctcgcca ttggccagcc cctcgatggt gatcaccttg
      721 gcgccctcgg cctggaccgc gagcatcgtg cagctcttca ccgacctgcc gtcgacctcg
      781 acgacgcaag caccgcattg gctggtatcg cagccgacat gcgtgccggt gaggccgagc
      841 gtctcgcgca ggaactggac cagcaaggtg cgggcctcga cggtcccgct cgctgccttg
      901 ccgttcaccg tcatcttcac ggcagtggac atgtcgtttt ctcccttgtg atgcgtcgtg
      961 ttggacgatc cgcccgcgcc cgtgtgtgac agcgggggag cgatttacca tagtttcccg
     1021 tgcgctgcgg agttggtcaa gccgaacccg caaaagcgca gcattcagcg ggtaaaggcg
     1081 agcaggatga cgatgatcac gaccaccagc ccaccaaccc agacgagcgg cgatagccga
     1141 ttgccgccgc gatcggcttc cggcgccggc ttgatgggtg cagctgccac gggttcggtc
     1201 ggcggaacag tccccggcgc ggccggtccg gcggtctcgg cggtgccgtc gccagccaca
     1261 ggaacgccga gcctggcggc aaaattgccg aagaattcct ccgccatctt gcgcgaggca
     1321 ccgtcgatca gccgcgagcc gatctgcgcc agcttgccgc cgacctgcgc tttgacggta
     1381 tagctgagca gcgtgccgtc gccctggtcg acgagcttca cggccgcccc gcccttggcg
     1441 aagccggcgg cgccgccggt gccctcgccg gtgatcgtgt agccattcgg cgggtcgaga
     1501 tcggacagcg tcaccttgcc gccgaacttc gccttcaccg ggccgacctt ggcggtgacc
     1561 ttggccgtcc actcgacatc cgaaagcttg acgatctcct cgcagccggg gatgcactgg
     1621 cgcagcacct ccggatcgtt cagggcctcc cagacgcgtt gccgcggcgc cgcaatctgg
     1681 tattcgccgt tcatgtccat cgttatggtc ctctcgaatg gcaggaacct agtccctgca
     1741 ccggcgagcg acaagcttgc gccgtaaagg aatttcagta tgccagcagg aatcggtgcc
     1801 gcgctcggcg tcgcctggac atttcccttt gccgggctgc tgctgtcgat cgccgtggcg
     1861 ccgctggtcg cgccgcaacc ttggcaccgc cactacggca agatcgcttc gttctgggcc
     1921 gcggctttcg tcctgccctt cgccgtcgtc tacggcgcgc cggttgcggc gcatgcgctc
     1981 ctcaaggcat tcctccacga atatctaccc ttcgtcgtgc tgctcggcgc gctctatacg
     2041 gttgccggcg gcgtgcggct gaccggcacg ctgcgcggca cgcccgtcgt ca
//
LOCUS       DASWGA010000366         2362 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2072418, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000366 DASWGA010000000
VERSION     DASWGA010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2362
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2072418"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..878)
                     /locus_tag="VF991_08810"
     CDS             complement(126..878)
                     /locus_tag="VF991_08810"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9556581.1"
                     /translation="MKLRQCVFVAKDLESSREELCDILGIEVAYRDPGVAKWGLVNVV
                     CPTGHDFLEIVKPSQPGTSAGRYIDRRKGDGGYMVIIQVPDAAAERKRVTGLGIRAVA
                     QKDLPEYQYTHFHPSDTSSVLLSLDTTFAPKGTDPALWWPPAEKNWLKHAHSDVTNGL
                     AGVEIQAENPDAAAALWSKLLNRPAQDDIIRLDDDGEIRFTPIVDGRGPGVSAYDVKV
                     VDRERVLAAAEKRGKKHGPAQVEVCGCRINLV"
     gene            922..1887
                     /locus_tag="VF991_08815"
     CDS             922..1887
                     /locus_tag="VF991_08815"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556582.1"
                     /translation="MRTVWTMGFVAAAALSFCFPDFIVFRFTQATIWAIALVGLVLLC
                     GISGQFSFAQAALFGIGGYGAAIVGAHTPLSVYCGLPLALLTGFAAGYGLGRIAGGHS
                     LWTQALVSYAFAIAFPQLLRWRVIEGFTGGVQGLYLDFPPPPLGLSNDRWSFLMALAL
                     LAAGLWLARNLIASRSGRALLAVREDELAAAAQGIRVVQVRATASGIAGAYLALAGCL
                     SAYQFGFVGPTAYNFALSVQMLFGLVIGGMQSLGGAILGGLFLQFFPDVTAGLGKGLS
                     ALLYAVLLIAAIVAMPEGAAGTLKRLFLLLSPARGRGWVRGKRTV"
     gene            complement(1952..>2362)
                     /locus_tag="VF991_08820"
     CDS             complement(1952..>2362)
                     /locus_tag="VF991_08820"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9556583.1"
                     /translation="GKSARMTTAFAKVGFSGDFGSHYFLHKLVGTAKARELYFTAEIL
                     NADQIEKLGLANRVIDDANLENETMAFAKKLAAGPRVAWWHVKKNMKVAEEGSLSEAL
                     DSEAARMIRTGETEDHKEAARAFVEKRAPVFKGY"
BASE COUNT          329 a          794 c          763 g          476 t
ORIGIN      
        1 gaaccggtcg tcgccgaaga acggcacgat gtggtcgatc tcgtaggcga tgcctttcag
       61 ctccaggcag accaggacct tgcgcacata gggcgagagg tagctgccga cgatcagtaa
      121 cggtttcata cgaggttgat ccggcagccg cagacctcga cctgcgcggg accgtgcttc
      181 ttgccgcgct tctcggcagc cgccagcacg cgctccctgt cgaccacctt cacgtcgtag
      241 gccgacacgc ccggcccacg cccatcgacg atcggcgtga agcggatctc gccatcgtcg
      301 tcgagccgga tgatgtcgtc ttgtgcagga cgattcagga gcttcgacca cagagcggca
      361 gccgcatccg gattttcggc ctggatctcg acgccggcca ggccgttggt cacgtccgag
      421 tgcgcgtgct tcagccagtt cttttcagcc ggtggccacc acagcgccgg atcggtgccc
      481 ttgggcgcga aggtcgtgtc gagcgacagc aggacgctgg acgtatcaga gggatggaag
      541 tgggtgtatt ggtattccgg caggtctttc tgcgccacgg cgcggatgcc gagaccggtc
      601 acgcgcttgc gctcggccgc ggcgtcgggc acctggatga tcaccatgta accgccgtcg
      661 cccttgcgcc gatcgatgta gcggccggcc gacgtgcccg gttgcgacgg cttcacgatc
      721 tcgaggaagt cgtggccggt cgggcagacg acgttgacca ggccccattt ggcgacgccg
      781 ggatcgcgat aggcgacctc gatgcccagg atgtcgcaca gctcttcgcg ggaactctca
      841 aggtccttgg ctacgaagac gcattgccgg agcttcatcg gatccctccc attctctgcg
      901 tgtacggtct atcgtagcgc catgcggacc gtgtggacca tgggcttcgt ggcggcggcc
      961 gcgctgtcgt tttgcttccc ggacttcatc gtctttcgct tcacccaggc gacgatctgg
     1021 gcaatcgccc tggtcggcct cgtgctgctg tgcggcatca gcggccagtt ctcgttcgcc
     1081 caggccgcct tgttcggcat cggcggctac ggcgccgcca ttgtcggcgc ccacacgccg
     1141 ctttcggtct attgcggcct gccgcttgcg ctgctgacgg gctttgccgc gggctatggc
     1201 ctggggcgca ttgccggcgg ccacagtctc tggacgcagg ccctggtgag ctacgccttt
     1261 gccatcgcct ttccccagct cctgcgctgg cgcgtgatcg aaggctttac cggcggcgtg
     1321 cagggcctct atctcgactt tcccccgccg ccgcttggcc tcagcaacga ccgctggagc
     1381 ttcctgatgg ccctggcgct gttggcggcc gggctgtggc tggcgcgcaa cctgatcgcc
     1441 agccgctccg gccgcgccct gttggcggtg cgcgaggacg agctcgcggc ggcggcccag
     1501 ggcattcgcg tcgtgcaggt gcgcgccacc gcctcgggca tcgccggcgc ctacctggcg
     1561 ctggccggct gcctgtcggc ctaccagttc ggcttcgtcg gccccacggc ttacaacttc
     1621 gcgctctcgg tgcagatgct gttcggcttg gtgatcggcg gcatgcagtc gctgggcggc
     1681 gcgatcctgg gcggactctt cctgcagttc ttccccgacg tcacagcagg gctgggcaag
     1741 ggcctgtccg ccctgctcta tgccgtgctc ttgatcgccg ccatcgtggc catgcccgag
     1801 ggcgcggcgg ggacgctcaa acgcctcttc ttgctcctct cccccgctag ggggagaggt
     1861 tgggtgaggg ggaagcgcac agtgtagccc cctcacctag cctctccccc taacggggga
     1921 gaggaatttt gagatcgaga ggaacccctt atcagtatcc cttgaacacc ggtgcgcgct
     1981 tctcgacgaa ggcgcgggcg gcttccttgt ggtcctcggt ctcgccggtg cggatcatgc
     2041 gcgcggcctc cgaatcgagc gcctccgaaa gcgagccctc ttccgccacc ttcatgttct
     2101 tcttgacgtg ccaccatgcc acccgcgggc cggccgcgag cttcttcgca aaggccatgg
     2161 tctcgttctc gaggttggcg tcgtcgatca cgcgattggc cagtcccagc ttttcgatct
     2221 gatcggcatt gaggatctcg gccgtgaaat aaagctcgcg cgccttggcc gtgccgacca
     2281 gcttatgcag gaaatagtgt gaaccgaaat cgcctgagaa gcccactttg gcgaaggccg
     2341 tcgtcatgcg tgcgctcttc cc
//
LOCUS       DASWGA010000367         4330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_673763, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000367 DASWGA010000000
VERSION     DASWGA010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4330
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673763"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..1122
                     /locus_tag="VF991_08825"
     CDS             115..1122
                     /locus_tag="VF991_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556584.1"
                     /translation="MNSPPKGPANGPLLELRHLAVTFATDDGTVHAVDGIDLSLARGR
                     TLGLVGESGCGKSVTSLAIMGLLPPENSKVKGEVRFEGRDLLRLDADTIRDLRGARLA
                     MIFQEPMTSLNPAYTVGDQIVEVIQRHQGLSATDARARAIEMLRIVRIPSPERRIDDY
                     PHKLSGGMRQRAMIAMALACGPELLIADEPTTALDVTIQAQILDLMRGLRRDTGTAII
                     LITHDLGVVAEMADDVAVMYAGQIVERAPVRDLFARPEHPYTVGLLGSIPRLDEKRER
                     LPSIEGRVPDMTRPPVGCRFAARCPFVEPACRDAEPALVEVAPGHLTRCRRAPLSGVV
                     Q"
     gene            1119..2195
                     /locus_tag="VF991_08830"
     CDS             1119..2195
                     /locus_tag="VF991_08830"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HEX9556585.1"
                     /translation="MSALLEVAGLAKHFPVRRGAFGLVSGHVRAVDGVDFHLKAGETL
                     AIVGESGCGKSTVGRLVLRLIEPSAGEVRFEGEDLLALDDGEMRARRQRMQVIFQDPY
                     GSLNPRMTVGAMLGEPLMLHGLARNEAARRARVGELLELVGLRPDHARRYPHEFSGGQ
                     RQRLAIARALAVEPRLIVADEPVSALDVSIQAQVINLMRSLQQRFGLAYIFISHDLAV
                     VKHIADRIAVMYLGKIVETATTDELFRNPRHPYTRALLAAVPLPDPTVVRERTLLEGD
                     IPSAMNPPTGCRFHTRCIFAREACRRDEPVLANDGTGHATACPYWPEFPPAALLSEGR
                     GQDQDRIRLERLQAAFVSDQREAS"
     gene            2192..3709
                     /locus_tag="VF991_08835"
     CDS             2192..3709
                     /locus_tag="VF991_08835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013761356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556586.1"
                     /translation="MKKTLGLMALFLALGAAITGSAQAQSHLRIGLAEDPDVLDPTLA
                     RTYVGRIVFSSICDKLFDIDEKLAIVPQLALSHETSADGKAVTIKLRPGVKFHDGEPL
                     NAEAAKYSIDRHLTLKGSFRKPELGSVDTVEIVDPLTIKLVLKEPFSPLLAQLTDRAG
                     MMVSPKAAEAAGDKFGLKPVCAGPFKFVERVQQDRIVVEKFADYWNKDNIFIDKITYL
                     PIVDGTVRLANLRSGGLDLIERVLATDIKTVRDNPKLKLSKAVQLGYLGLTMNLANGP
                     KADTPLAKDARVRRALELSIDRDALNQVVFNGEFVPGNQWINPTNSYYQKAFPIPKRD
                     VAKAKALLKEAGVTGPLAIDFMVPNGPETRAVAEVVQSMAAEAGFDLKIRITEFATSI
                     KQAEDGEFQLYLIGWSGRSDPDGNSYVFQTCNAPQNNGKYCDKEVDAAHAEARSKSDP
                     AERKKAYEKVAAKFLAEGSILYLYHTQVLVALSDKVEGYKQLPDGLVRVVGVKLK"
     gene            3711..>4330
                     /locus_tag="VF991_08840"
     CDS             3711..>4330
                     /locus_tag="VF991_08840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556587.1"
                     /translation="MLAFLTQRLLQIIPTLILVSMLIFGLQQLLPGDPALIMAGEERD
                     PKVLEEIRQQYRLNEPIPVQYFYWMKGVLSGNLGESMRLKSSVASLVAEKLPVTLQLA
                     GMAIIVALGIGIPAGIISAVKKDTAWDYGANIFALWGISTPNFWLGILMIFLFSVTLG
                     WLPASGYVRLGEDWRSSLATTVMPASVLGNAIAAVLMRHTRSAMLQA"
BASE COUNT          722 a         1519 c         1396 g          693 t
ORIGIN      
        1 cgagcgctgg acgcttttcc gcgccttcgt gccgacgcgc gagaacccgg ccggcatctt
       61 cgaccgcgcc gagatcgacg ccggtatcga aaggagcctg gcggcggagc gccgatgaac
      121 agccctccca aggggcctgc caacgggccg ctgctcgaat tgcgccatct cgccgttacc
      181 ttcgccaccg acgacggcac cgtccacgcc gtcgacggca tcgatctgtc gctggcgcgc
      241 gggcgcaccc tgggtttggt cggcgaatcc ggctgcggca agagcgtgac gtcgcttgcc
      301 atcatggggc tgctgccgcc ggagaactcg aaggtgaagg gcgaggtccg cttcgagggt
      361 cgcgatcttt tgaggctcga cgccgacacg atccgcgacc tgcgcggcgc ccggctcgcc
      421 atgatcttcc aggagccgat gacctcgctc aatccggcct atacggtagg cgaccagatc
      481 gtcgaggtga tccagcgcca ccagggactg tcggccaccg atgcgcgcgc gcgcgccatc
      541 gaaatgctgc gcatcgtgcg catcccctcg ccggagagac ggatcgacga ctatccgcac
      601 aagctgtcgg gcggcatgcg ccagcgcgcc atgatcgcca tggcgctggc ctgcggccct
      661 gagctcctga tcgccgacga gccgaccacg gcgctcgacg tcaccatcca ggcgcagatc
      721 ctcgacctga tgcgcggcct gcgccgcgac accggcaccg ccatcatcct gatcacccac
      781 gatctcggcg tcgtcgccga aatggccgac gacgtggcgg tgatgtatgc cggccagatc
      841 gtcgagcgcg ccccggtccg cgacctcttc gcccggcccg aacatcccta cacggtgggc
      901 ctgctgggct cgatcccgcg gctcgacgag aagcgcgagc gcctgccttc gatcgagggc
      961 cgcgtgcccg acatgacccg cccgcccgtg ggctgccgct tcgccgcgcg ctgtccgttc
     1021 gtcgagccgg cctgccgcga cgcggagccg gcgctggtcg aggtggcgcc gggccatctg
     1081 acgcgctgcc gccgcgcgcc gctttccggc gtcgttcaat gagcgcgctg ctggaagtgg
     1141 cggggctggc caagcacttc ccggtgcggc gcggcgcctt cggcctggtc tccggccacg
     1201 tccgcgccgt cgacggcgtc gactttcatc tcaaggcggg cgagacgctg gccatcgtcg
     1261 gcgaatcggg ttgcggcaaa tcgacggtcg gccgcctggt gctgcgcctg atcgagccct
     1321 cggccggcga ggtccgcttc gagggcgagg acctgctggc gctcgacgac ggcgagatgc
     1381 gggcccgccg ccagcgcatg caggtgatct tccaggatcc ctacggctcg ctcaatccgc
     1441 gcatgacggt gggcgccatg ctgggcgagc cgctgatgct gcatggcctg gcccgcaacg
     1501 aagcagcacg gcgcgcccgc gtgggcgagc tcttggagct ggtcggactg cgacccgacc
     1561 atgcgcggcg ctatccgcac gaattctccg gcggccagcg ccagcggctt gccatcgcgc
     1621 gcgcccttgc cgtcgagccc aggctgatcg tggccgacga gccggtgtcg gcgctcgacg
     1681 tctccatcca ggcgcaggtg atcaacctga tgcgctcgct gcagcagcgc tttggcctcg
     1741 cctacatctt catcagccac gatctcgcgg ttgtgaagca tatcgccgat cgcatcgccg
     1801 taatgtacct cggcaagatc gtggagacgg cgacgaccga cgaactcttc cgcaatcccc
     1861 gccatcccta cacgcgcgcc ttgctggcgg cggtaccgtt gcccgatccg acggtggtgc
     1921 gcgaacggac attgctcgag ggcgacatcc cgagcgccat gaacccgccg accggttgcc
     1981 gcttccacac ccgttgcatc tttgcccgcg aggcctgccg ccgcgacgag ccggtgctgg
     2041 cgaacgatgg cacaggacat gctacagcct gcccgtactg gcccgaattt ccgccggcag
     2101 ccctcctgag cgagggacgc ggccaagacc aagaccgaat ccggctggaa cgcctgcagg
     2161 cggcgttcgt atctgatcaa agggaggctt catgaaaaaa acgctagggc tgatggccct
     2221 tttcctggcg cttggcgccg ccataaccgg cagcgcgcag gcccagtcgc atctgcgcat
     2281 cggtcttgcc gaggatcccg acgtgctcga ccccaccctg gcgcggacct atgtcggccg
     2341 catcgtgttc tcctcgatct gcgacaagct gttcgacatc gacgaaaagc tcgccatcgt
     2401 gccgcaattg gcgctcagcc acgagacctc ggccgacggc aaggccgtca ccatcaagct
     2461 gcggcccggc gtgaagttcc atgacggcga gccgctcaac gccgaggcgg ccaagtacag
     2521 catcgaccgc cacctcaccc tgaagggctc gttccgcaag cccgagctgg ggtcggtcga
     2581 tacggtcgag atcgtcgatc cgctgaccat caagctggtg ctgaaggagc cgttctcgcc
     2641 gctgctcgcc cagctcaccg accgcgccgg catgatggtc tcgcccaagg cggccgaggc
     2701 ggcgggcgac aagttcggcc tgaagccggt ctgcgccggc ccgttcaagt tcgtcgagcg
     2761 cgtccagcag gaccgcatcg tggtcgagaa gttcgccgac tactggaaca aggacaacat
     2821 tttcatcgac aagatcacct acctgccgat cgtcgacggc acggtgcggc tggccaacct
     2881 gaggtcgggc ggtctcgacc tgatcgagcg cgtgctcgcc accgacatca agacggtgcg
     2941 cgacaatccc aagctcaagc ttagcaaggc cgtccagctc ggctatctcg gcctcaccat
     3001 gaacctcgcc aacggaccca aggccgacac gccgctcgcc aaggacgccc gcgtgcgccg
     3061 cgccctggaa ctgtcgatcg accgcgacgc gctgaaccag gtcgtgttca acggcgagtt
     3121 cgtgccgggc aaccagtgga tcaacccgac caactcctac taccagaagg ccttcccgat
     3181 ccccaagcgc gacgtcgcca aggccaaggc gctgctcaag gaggccggcg tcaccgggcc
     3241 gctggcgatc gacttcatgg tccccaacgg gccggagacg cgggcggtcg ccgaagtggt
     3301 gcagtcgatg gccgccgaag cgggcttcga cctcaagatc cgcatcaccg agttcgcgac
     3361 ctcgatcaag caggccgagg acggcgagtt ccagctctac ctgatcggct ggagcggacg
     3421 cagtgatccc gacggcaact cctacgtctt ccagacctgc aacgcgcccc agaacaacgg
     3481 caagtactgc gacaaggaag tcgacgccgc gcacgccgaa gcgcgttcca agagcgaccc
     3541 ggcggagcgc aagaaggcct acgagaaggt cgccgccaag ttcctggccg agggctcgat
     3601 cctctatctc tatcacaccc aggtcctggt cgcgctgtcc gacaaggttg aaggctacaa
     3661 gcagttgccc gacgggctgg tccgcgtggt cggcgtcaag ctgaagtaac gtgctcgctt
     3721 tcctgaccca gcggctgctg cagatcatcc cgaccctgat cctggtgtcg atgctgatct
     3781 tcggtttgca gcagctgctg ccgggcgacc cggcgctgat catggcgggc gaggagcgcg
     3841 atcccaaggt gctggaggag atccgccagc aataccggct gaacgagccg atcccggtcc
     3901 agtacttcta ctggatgaag ggcgtgctgt cgggaaacct gggcgagtcg atgcggctca
     3961 agagctcggt cgcctcgctg gtcgccgaga aactgccggt cacgctgcag ctcgccggca
     4021 tggcgatcat cgtggcgctg ggcatcggca ttcccgccgg catcatctcg gcggtcaaga
     4081 aggacacggc gtgggactac ggcgccaaca tcttcgcact gtggggcatc agcacgccca
     4141 atttctggct gggcatcctg atgatcttcc tgttctcggt gaccctggga tggctgccgg
     4201 cctcgggtta cgtgcggttg ggcgaggatt ggcggtccag cctggccacc acggtgatgc
     4261 cggcttccgt gctgggcaac gccatcgccg ccgtcctgat gcgccacacc cgcagcgcca
     4321 tgctgcaggc
//
LOCUS       DASWGA010000368         2374 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1428202, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000368 DASWGA010000000
VERSION     DASWGA010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1428202"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(257..1378)
                     /locus_tag="VF991_08845"
     CDS             complement(257..1378)
                     /locus_tag="VF991_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LanC-like protein"
                     /protein_id="HEX9556588.1"
                     /translation="MAIDEIVSDALTHFDEEGFWPAHPQDNAKDGHSGFYMGAAGMIW
                     GIDYLQRVGATAPRIDFRPVLARLLATTQAEMAGYGDYSTNGSFLFGDLGTALVVMRL
                     APSGAIADLIHERAAINLQLPVRELMWGMPGSMLACVHMAEMTAEPRWQTLFAAQASR
                     LLGELEESERGPLWTQDLYGQQRCYLGPVHGYAGNMIPLIRGWDWLTDDQRAQVSDAT
                     TRTLVANAWRCEHGVSWPAVAGQEKSPYLCQHCHGAPGMVTTFADAPFTSADLESRLV
                     EGGNFTWAAGPLAKGSNLCHGTGGNGYAFLKLHRRTGSPLWLERARAFAMTAIAQCRE
                     TRTELGRGRYSLWTGDIGLAVYLWDCLKAEPRFPTVDAF"
     gene            complement(1460..>2374)
                     /locus_tag="VF991_08850"
     CDS             complement(1460..>2374)
                     /locus_tag="VF991_08850"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9556589.1"
                     /translation="HGGFMPAKALAEADVGLLVDVDVPWIPSDMPDNPATWWAHIDVD
                     AEKRNFPMWTFPGNLRLPGDSHRILADLLAALKAKADAGFKARAAGRVKRLAEEAKGR
                     REQAVKMAATPGSVGQINPHYLCAALAKALKPSDIVLNEAIRNGPVVAQQMPRTEPGT
                     LVGLAGGGLGFSGGMALGLKLAMPERTIVQIAGDGTFYFSNPQSTLAVSRQYKLPIFT
                     VVLDNSGWAAVKEATLRVYPDGEAKAGGEFGATLAPDMDFAKVAEAAGAHGELLSDPA
                     SVEGAIARCLDAVRHGRSAVLHAKVTRL"
BASE COUNT          395 a          797 c          788 g          394 t
ORIGIN      
        1 cgcgacaagg tgaagcccga cggcgcgggc gcgctgcgct tcgccgagcg catcgtggtc
       61 tgcgacggcc gccgcttcga caccctggtg gcgatcccgt tttgacaatc atgcttgcag
      121 atcttcgctg ggggcgcgcc actcctgtgg cgcgtcaaga tcatgatcgc gcgactggag
      181 tcgcgcgcgc ccagcatagc catcgccctt ggcgacccca acggcatcgg gccgcgctgg
      241 cgggcgctag cgcagcctaa aaggcatcga cggtcggaaa acgcggctcc gctttcaggc
      301 aatcccaaag atacacggca agcccgatat ccccggtcca cagcgaatag cggccacgcc
      361 ccagctcagt gcgcgtttct cgacactgcg caatcgcggt catggcgaat gcgcgcgccc
      421 gctccagcca aagcgggctg ccggtccggc gatggagttt caggaatgca tagccgttgc
      481 caccggtgcc gtgacagaga ttggagccct tggcgagtgg accggctgcc caggtgaaat
      541 tgccgccctc gaccaggcgg ctttccagat cggccgacgt gaacggcgcg tcggcaaagg
      601 tcgtcaccat gccgggtgca ccgtgacagt gctggcagag gtagggcgat ttttcctggc
      661 ccgcgaccgc aggccatgaa acgccgtgtt cgcagcgcca ggcgttggcg accagggtac
      721 gcgtcgtggc gtcggagact tgcgcgcgct gatcatcggt cagccaatcc cagccgcgaa
      781 tcaacgggat catgttgccg gcataaccgt ggacaggccc gagatagcag cgttgctggc
      841 cgtagaggtc ctgcgtccac agcggacctc tttcgctttc ctccagctcg ccgagcagac
      901 ggctggcctg tgcggcgaaa agcgtttgcc agcgcggctc agccgtcatt tcggccatgt
      961 ggacgcaggc cagcatcgat cccggcattc cccacatcaa ctcgcggaca ggtagctgca
     1021 ggttgatcgc ggcgcgctca tggatcagat cggcgatcgc tccagagggt gccagccgca
     1081 tgacgaccag ggctgttcca agatcgccga acaggaacga gccgttcgtc gagtagtcgc
     1141 catatcccgc catttccgcc tgcgtggtcg ccagcaatcg cgccaagacg ggacgaaagt
     1201 cgatccttgg cgcagtcgcg ccgacgcgct gcaaatagtc gattccccag atcatgccgg
     1261 cggcgcccat atagaagccg ctgtgaccgt ccttggcgtt gtcctgcgga tgggcgggcc
     1321 agaacccctc ctcgtcgaaa tgtgtcagcg catccgacac gatttcgtcg atcgccaccg
     1381 tggcgatgcc gacgtcccac ggcgccgggc gcagcgggac gtggcgggcg ttttcgatca
     1441 tggcttctcg aatgcgacgc tacagtcgcg ttaccttcgc atgcagcacc gctgagcgtc
     1501 catgccgcac ggcgtcgaga cagcgcgcga tcgcaccctc gaccgacgcg ggatcgctca
     1561 aaagctcgcc gtgcgcgccg gcggcttcgg cgaccttggc gaaatccatg tcgggcgcca
     1621 gcgtggcgcc gaactcgccg ccggccttgg cctcgccgtc gggatagact cgcagggtcg
     1681 cctccttgac ggccgcccag ccggaattgt cgagcaccac ggtgaagatc ggcagcttgt
     1741 actggcgcga cacggccagc gtcgattgcg ggttggagaa gtagaaggtg ccgtcgccgg
     1801 cgatctgcac gatcgtgcgc tcgggcatgg cgagcttcag ccccagcgcc atgccgccgg
     1861 agaagcccag cccgccgccg gccaatccaa caagcgtgcc gggttcggtg cgcggcattt
     1921 gctgggcgac cacggggccg ttgcggatcg cctcgttcag cacgatgtcg gacggcttca
     1981 aggccttggc gagcgcggcg cagagataat gcgggttgat ctggccgacg ctgccgggcg
     2041 tggccgccat cttgaccgcc tgctcgcgcc ggcccttggc ctcctccgcc agacgtttta
     2101 cgcgcccggc ggcgcgcgcc ttgaaaccgg cgtcggcctt ggccttcagc gccgccagaa
     2161 ggtcggcgag gatgcgatgg ctgtcgccgg gcaggcgcag gttgccgggg aaggtccaca
     2221 tcggaaagtt gcgcttctcg gcatcgacgt cgatatgcgc ccaccaggtc gcgggattgt
     2281 ccggcatgtc gctcgggatc cacggcacgt cgacgtcgac cagcaggccg acatcggcct
     2341 cggccagcgc cttggccggc atgaagccgc cgtg
//
LOCUS       DASWGA010000369         2177 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2454608, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000369 DASWGA010000000
VERSION     DASWGA010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2454608"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(315..1550)
                     /locus_tag="VF991_08855"
     CDS             complement(315..1550)
                     /locus_tag="VF991_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9556590.1"
                     /translation="MPQIVFKNLNLLDPRWNEARGGYEVLVEGDLIKEVSPKPIKAAK
                     AQVVDCGKRTLMPGLIDCHVHVFLVEVNIRNLEHIPLTLLTARSADLMKGMIDRGFTT
                     VRDTGGADWGIKTAVESGLIPGPRLFISGRAIGPTGGHSDSRRRTDTGATCGCCNAMV
                     YCMAIADGADEVRKLVREQMRQGADQVKIMCSGGVASPYDPLDSLQFSEAEIAAATDE
                     AKNFGRYVLAHAYTPEAITRAVTNGVRTIEHGNLIDAKSAKLLKSSGGYMIANLVTYF
                     SMKERAAQFGMTADMLAKNDIVLEGALRSLEICKAAGVKVGYGTDLLGQLQVDQSLEF
                     IHRAKVLKPLEIIRQATTVGAEILRQEGKLGIVEPGAFADLIVVDGNPLKKLELFLDQ
                     GAHLPVIMKAGKFHKNALK"
     gene            1628..2149
                     /locus_tag="VF991_08860"
     CDS             1628..2149
                     /locus_tag="VF991_08860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556591.1"
                     /translation="MRRVVVIGTTGSGKSRLAERLAEQTGLRVIELDALFWGRDWQPA
                     SVELFRHRVERETRQGDWIVVGNYGQVRDLVWRPADTLVWLDLPLALVMWRLLRRTAY
                     RAATRQELWGTGNRETWGNAFLSRQSILLWALKTHWRNRKKFSLECEFLAKEKRVVRL
                     KSPREVERFVAAA"
BASE COUNT          358 a          684 c          716 g          419 t
ORIGIN      
        1 gatcagcccc ggcatcagcg tgcgcttgcc gcaatcgacc gtttgtgcgg tcttggattt
       61 gatcggcttg gccgacacct cttttatggt gtcgccctcg accagcacct catagccgcc
      121 gcgcgcggtg tcccagtgtg gatcgagcag gcgcaggttc ttgaacaaaa acgacattca
      181 ttgatctccg aagactgtcg tgccgagtgt cctgtcgtcc tgagcgtagc gaaggacctc
      241 atcgccgcta gccactggca tgagatcctt cgctgcgctc aggatgacag ttgtgctgca
      301 tatagaccgt gcgttcactt caatgcgttc ttgtggaatt tgcccgcctt catgatcacc
      361 ggcaggtggg cgccctggtc gaggaagagc tcgagcttct tcagcggatt gccgtcgacc
      421 acgatcaggt cggcgaaggc gcccggctcg acgatgccga gcttgccttc ctggcgcagg
      481 atctcggcgc cgacggtggt cgcctgccgg atgatctcca gcggcttcag caccttggcg
      541 cgatggatga actcgaggct ttggtcgacc tgaagctggc ccaggagatc ggtgccgtac
      601 ccaactttca ctccggcggc cttgcaaatt tcgagcgagc gcagcgcccc ttccagcacg
      661 atatcgttct tggccagcat gtcggccgtc atgccgaatt gcgcggcgcg ctccttcatc
      721 gagaaatagg tcaccaggtt ggcgatcatg tagccgccgc tcgatttcag cagcttggcc
      781 gacttggcgt ctataaggtt gccgtgctcg atggtgcgca cgccgttggt caccgcccgg
      841 gtgatcgcct ccggcgtata ggcgtgggcc agcacgtaac ggccgaaatt cttcgcctcg
      901 tcggttgccg cggcgatctc ggcctcggaa aattgcagcg aatcgagcgg gtcgtagggc
      961 gaggcgacgc cgcccgagca catgatcttc acctggtcag cgccctggcg catctgttcg
     1021 cgcaccagct tgcgcacctc gtcggcgccg tcggcgatcg ccatgcaata gaccatggcg
     1081 ttgcagcagc cgcaggtcgc gccggtgtcg gtgcggcggc gggaatcgct gtggccgccg
     1141 gtcgggccga tggcgcggcc ggaaatgaac agccgcgggc cggggatcag gccggattcg
     1201 acggcggtct tgatgcccca gtcggcgccg ccggtgtcgc gcaccgtggt gaagccgcgg
     1261 tcgatcatgc ctttcatcag gtcggccgag cgcgccgtca gaagggtcaa cgggatgtgc
     1321 tcgaggttgc ggatattgac ctcgaccagg aaaacgtgga catggcagtc gatcaggccc
     1381 ggcatcaggg tgcgcttgcc gcaatccacc acctgggcct tggccgcctt gatcggcttc
     1441 ggcgacacct ctttaatcag gtcgccctcg accaaaacct cgtagccccc gcgcgcctcg
     1501 ttccagcgcg ggtcgagcag gttcaagttc ttgaaaacga tctgcggcat caacgctccc
     1561 cccaaccggc gccggcaccc tacgatggcc gccgatttgg cgctacagtc gggcgaaggt
     1621 tggcggaatg cggcgcgtcg ttgtcatcgg aaccacaggg tcgggaaaga gcaggctggc
     1681 ggaacggctg gccgagcaga ccggcctgcg cgtgatcgag ctggacgcgt tgttctgggg
     1741 acgcgactgg caacccgcgt ccgtcgagct gttccgccac cgggtcgagc gcgagacccg
     1801 acagggtgac tggatcgtcg tcggcaatta cggccaggtg cgcgatctgg tgtggcggcc
     1861 ggccgatacc ctggtctggc tcgacctgcc gctcgcgctg gtgatgtggc gcttgctgcg
     1921 gcgcaccgcc tatcgcgcgg cgaccaggca ggaactatgg ggcaccggca accgcgagac
     1981 ttggggcaac gccttcctga gccgccagtc catcctcctg tgggcgttga agacccattg
     2041 gcgcaatcgc aagaaatttt cgctggaatg cgagttcctc gccaaggaga agcgggtcgt
     2101 ccgcctgaaa agcccgcgcg aggttgagcg tttcgtggcg gcggcgtaag caggcgccat
     2161 gtcggtccac acgtttt
//
LOCUS       DASWGA010000370         3704 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2454616, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000370 DASWGA010000000
VERSION     DASWGA010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3704
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2454616"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VF991_08865"
     CDS             <1..256
                     /locus_tag="VF991_08865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556592.1"
                     /translation="FDSAPDLGSYAVCNGETRTRAHQPGVLYLFAVYCRNELALSEAT
                     AWTQASSPSDPRVDRFFRELFQVVFSDSQAYRPLNPRRQP"
     gene            354..920
                     /locus_tag="VF991_08870"
     CDS             354..920
                     /locus_tag="VF991_08870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556593.1"
                     /translation="MRFKNKIVALVGLMILTACASSIAVIGGSYYATQYDFSEFFAAT
                     DGRNFQVILVGNPFPNMDPNTVARELLPVMQAAKPRPALTFTYDAPVERPRPYYRLVL
                     VFDSAPDLGSYAVCNGVTRTRANRPGIFYVYAVYCRNDMAMSETTAWTQATGPTDPRV
                     DQLFRELFQVVFPDSKAYRPLSGGNNRR"
     gene            1016..1717
                     /locus_tag="VF991_08875"
     CDS             1016..1717
                     /locus_tag="VF991_08875"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9556594.1"
                     /translation="MQTLQDRHVVVTGGTGTLGAAVVQSFIHAGAICHIPAIESVVPA
                     GRFPDSGKITVSTNIDLADEASVRNFYSKLPPLHAVVNIAGGFAYAPIADSSAQVLQQ
                     QLSMNLVSCVLSCREAVANFRKSGRGGHIINISARPALNPRQGANMTAYTAAKAAVAA
                     FTVALAEELKNESISVIALCPSTIDTPANRADMPKADHTTWVKPEAIAELIVAQCSLS
                     DPVDSGALIPVYGRA"
     gene            1753..2796
                     /locus_tag="VF991_08880"
     CDS             1753..2796
                     /locus_tag="VF991_08880"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEX9556595.1"
                     /translation="MAAWYSLADLFLSRLDAETAHGLALRALKSGLLPADRRPDPPSL
                     AVRIWDRTLPNPIGLAAGFDKNAEVSDALLALGFGLVEIGSVTPRPQAGNPRPRLFRL
                     AEDRGVINRMGFPGQGLDAARSRLATRPRRGFVGVNVGANKDSTDRAADYVACGAALA
                     PYADYLVCNVSSPNTPGLRNLQGRTQLADLLKRVQGAIAAKPVPLLVKIAPDATDEDL
                     DDIVAVCRELRMDGVIIGNTTLSRPPSLRSPRREEAGGLSGAPLMALSTDVLRRTARR
                     VERQFPLIGCGGIGSGADAYAKIRAGASLVQLYSAMVYDGPPLIRRIKDELAALLARD
                     GFASVGEAVGADL"
     gene            complement(2807..>3704)
                     /locus_tag="VF991_08885"
     CDS             complement(2807..>3704)
                     /locus_tag="VF991_08885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX9556596.1"
                     /translation="IRCCYHGWLFDVEGHCLEMPCEAHPAGPQCQRVRQPWYPVAERY
                     GLVFAYLGPPEKRPVLPRYECLEALQPGEFVESDDSSIGSGGIVIAPCNWLQHFENVV
                     DPYHVPILHGAFSGPQFVEQMSAFPKVKFEYGRQGVKATSVRPRPDGKRFRRVTEAVV
                     PTLRVVPNPRVAQYGMVESIGWTLPIDDTHYRIYVAGRVREKGELAKFKSLYNGKTWA
                     ELSPEEHQRFPGDTEAQVGQGAITFHSEEHLMSSDQGVSMLRILLQKQADIVAAGGDP
                     VGVAYDEAGAYVKFDAGQFLDD"
BASE COUNT          621 a         1296 c         1135 g          652 t
ORIGIN      
        1 cttcgattcc gcccccgatc tgggctccta tgcggtgtgc aacggcgaga cccgcaccag
       61 ggcgcaccag ccgggcgtct tgtatctctt tgccgtctac tgtcgaaacg agctggcgct
      121 gtcggaagcc accgcctgga cgcaggcgag cagtccgagc gatccgcgcg tcgaccggtt
      181 tttccgcgaa ttgttccagg tcgtgttctc cgattctcag gcatatcggc cgctgaaccc
      241 cagaaggcaa ccttagagcc gaacgcgctg catacactcc gcgcgacaat gtgacatgaa
      301 gtgaccgcga caccggtcta tcatccatga tgcgcggtga ggagaacgtc cgcatgcgtt
      361 tcaagaacaa gatcgtcgcc ctagtcgggc tcatgatcct taccgcgtgc gcctcgtcca
      421 tcgcggtcat cggcggcagc tactatgcga cgcagtatga ctttagcgag ttcttcgccg
      481 cgaccgacgg ccggaacttc caggtcatcc tagtcggcaa cccgttcccg aacatggatc
      541 ccaacacggt cgcccgcgag ctgttgccgg tcatgcaggc cgccaagccg cggccggcgc
      601 ttaccttcac ctacgacgct cccgtcgaaa ggccgcgccc gtattaccgt ctggtgctgg
      661 tcttcgattc cgcccccgat ctgggctcct atgcggtgtg caacggcgtc acccgtacca
      721 gggccaaccg gccaggcatt ttctatgtct atgccgttta ttgtcggaac gacatggcga
      781 tgtcggagac taccgcctgg acgcaagcga ccggcccgac cgatccgcgt gtcgaccaac
      841 tgttccgcga attgttccag gtcgtgttcc ccgattccaa ggcgtatcgg ccgctaagcg
      901 gtggcaacaa tcggcgctag agctgcggcc cggcaaagct tgcgctcgat aagctggaca
      961 aggccgcttc cactcctgtc tcttgtctcg gcaagagctt gattaaggag tggaaatgca
     1021 gacgctacag gatcgccacg ttgtcgtaac cggcggcacc gggacgctcg gtgcggccgt
     1081 cgtacagagc ttcattcacg cgggagcgat ctgccacatc cccgccattg aaagcgtcgt
     1141 accagccgga agatttcccg acagtggaaa gattaccgtt tccacgaaca tcgatcttgc
     1201 cgacgaagcg tcggtcagga acttttacag caagctgccg ccgctccatg cggtggtgaa
     1261 catcgccggc gggttcgcct acgcgcccat cgccgacagc tccgcgcagg tccttcagca
     1321 gcagctgtcg atgaacctcg tctcctgcgt gctgagctgc cgcgaggcgg tcgccaattt
     1381 ccgcaaatca gggcgaggcg gacacatcat caatatctcc gcccggcccg ctctcaatcc
     1441 gcggcagggc gccaacatga cggcctatac cgcggccaaa gccgccgtcg ccgccttcac
     1501 cgtcgctctc gccgaggagc tgaagaacga gagcatctcg gtcatcgcgc tctgcccgtc
     1561 gaccatcgac acgcccgcca accgcgccga catgcccaaa gccgatcaca ccacctgggt
     1621 caagcccgag gcgatcgccg agctgatcgt cgcgcaatgc agcctgtcgg acccggtcga
     1681 ctccggcgcg ctgatccccg tctatggcag ggcctgaacg ctccacaggg aacctctgct
     1741 aaccacacgg cgatggccgc ctggtattcc ctcgccgatt tgtttctttc ccgcctcgac
     1801 gccgagacgg cgcacggctt ggcgttgcgg gccctcaaaa gcggcctgct gccagccgac
     1861 cggcggcccg atccaccgtc gctcgccgtc cggatctggg atcgcactct tcccaatccg
     1921 atcggccttg ccgccggatt cgacaagaac gccgaagtgt ccgacgccct gctcgctttg
     1981 gggttcggcc tggtcgagat cggcagcgtg acgccccggc cccaggccgg caacccgcgt
     2041 ccgcgcctgt ttcgcctggc cgaggatcgc ggcgtcatca accgcatggg ctttcccggc
     2101 cagggcctcg atgccgcccg gtcgcggctc gccacccgcc cgcggcgcgg cttcgtcggg
     2161 gtcaatgtcg gggccaacaa ggacagcacc gaccgggcag ccgactacgt cgcctgcggc
     2221 gcggccctgg cgccttacgc cgactacctc gtctgcaacg tctcctcgcc caacacgccg
     2281 ggcctgcgca atctccaggg ccgcacgcag ctcgccgatc ttctcaagcg cgtgcagggc
     2341 gcgattgccg ccaagcccgt gccattgctg gtcaagatcg cgcccgacgc caccgacgag
     2401 gacctcgacg atatcgtcgc cgtctgccgc gagctccgga tggacggcgt cattatcggc
     2461 aacacgaccc tgtcgcggcc cccgtcgctg cgctcgccgc ggcgcgagga ggccggtgga
     2521 ctttccggcg cgccgctcat ggcgctctcg acggacgtac tgcgtcgcac ggcacggcgg
     2581 gtcgaacggc aattcccttt gatcggctgc ggcggcatcg gctcgggcgc cgacgcctac
     2641 gccaagatcc gcgccggggc gagcctggtg cagctttact cggccatggt ctatgacggg
     2701 ccgccgctca tccgccgcat caaggacgag ctcgcggcgc tgctcgcgcg cgacggcttt
     2761 gcgtcggtgg gcgaggccgt gggtgctgac ctatagcttc ccgtcgctaa tcgtcgagga
     2821 actgccccgc gtcgaacttc acgtaagccc cggcttcgtc gtaggccacg ccgaccggat
     2881 cgccgcccgc ggcgacgatg tcggcctgct tctgcagcag gatgcgcagc atcgagacgc
     2941 cctggtccga cgacatcaga tgctcctccg agtggaaggt gatggcgccc tgcccgacct
     3001 gcgcctcggt gtcgccggga aatcgctggt gctcctccgg tgagagctcc gcccaggtct
     3061 tgccattgta gagcgacttg aacttggcga gctcgccctt ctcgcgcacc cggccggcga
     3121 catagatgcg gtagtgcgta tcgtcgatcg gcagcgtcca gccgatcgat tcgaccatgc
     3181 cgtactgcgc aacccgtgga ttgggcacga ccctaagagt cggcaccacg gcctcggtga
     3241 cccggcggaa gcgcttgccg tcgggacgcg gtcggaccga ggtcgctttc acgccctgac
     3301 ggccgtactc gaacttgacc ttggggaagg cgctcatctg ttcgacgaac tgcggcccgc
     3361 tgaaggcgcc atgcaggatg ggcacgtgat agggatcgac cacgttctcg aaatgctgca
     3421 gccagttgca gggcgcgatc acgatgccgc cgctgccgat gctggaatcg tctgattcga
     3481 cgaactcgcc gggctgcaag gcctccaggc attcgtagcg cggcaacacc ggcctcttct
     3541 ccggcggtcc gagataggcg aacaccagcc cgtagcgctc cgcgacggga taccagggct
     3601 ggcgcacccg ctggcattgc gggccggcag gatgggcctc gcagggcatt tcgaggcaat
     3661 ggccttcgac gtcgaacagc cagccgtgat agcagcagcg gatg
//
LOCUS       DASWGA010000371         2606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1184105, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000371 DASWGA010000000
VERSION     DASWGA010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1184105"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..879)
                     /locus_tag="VF991_08890"
     CDS             complement(<1..879)
                     /locus_tag="VF991_08890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012255361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEX9556597.1"
                     /translation="MLRPGPRNLITDVDGILVGSAEDPRLRSGVSVILCENPSTASVD
                     VRGGGPGTRETDLLDPSCRVDRIDAVCLSGGSAFGLSAADGVMRWLTERGRGYAVADI
                     VVPIVPTAILFDLLNGGDKNWDWPPYRELAYAAADKAGADFALGNAGAGLGAKAGNLK
                     GGLGSASAVDSSNGLQVGALVAVNARGYTTMGDMPQFWAWALEQQAEFGGLPPPHGLS
                     LSVSHARADLTHDPADAARSDPRANTTIAVVATNARLDKASAKRLAVMAQDGLARAIR
                     PVHTPQDGDTVFAIATG"
     gene            complement(882..2069)
                     /locus_tag="VF991_08895"
     CDS             complement(882..2069)
                     /locus_tag="VF991_08895"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HEX9556598.1"
                     /translation="MAQKKLPSVLLRAGEDRRVRAGHPWVFSNEILMDAETKALPAGS
                     LANLRAPSGEALGLVTFNPHSLIAARVLSSNPETVVDALFFGRRLAQAAALRDRLVGV
                     PYYRLIHAEADGLPGTIIDRFGEALVVQVNTAGMELLTPVLLEALEAELSPKTIVLKN
                     DSPVRELEGLKRETVVVKGDASGAIELVENGARFVADLSVGQKTGWFYDQRDNRRFMA
                     GLAGDACVLDVYSYSGGFGVLAAKQGAKSVLCVDRSQTALDAAKAAATLNGVDKVVSL
                     EKSEAFDALEKLAGKSFDVVICDPPAFVKSRKDLKTGAQGYRKLVRLAAPLVAPGGFL
                     FAASCSHLVDPPLFAEQVRRGLRDASRSGRILLSSGAALDHPVHPGLPETAYLKALTL
                     QLD"
     gene            complement(2071..>2606)
                     /locus_tag="VF991_08900"
     CDS             complement(2071..>2606)
                     /locus_tag="VF991_08900"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9556599.1"
                     /translation="SIVDRWGNAVSFTTTIEAPFGAQIMVRGFLLNNELTDFSPRPES
                     DGRLVANRVEAGKRPRSSMSPTLIFDSDHKLVAALGSAGGARIIGDTLQTIVGVLDWK
                     LSMQDAIALPRIANLNGPTELEEGTSAMARADGLRALGHQVQVRAHDGGLTGVRRIED
                     GWEGGADPRRDGVAKGE"
BASE COUNT          422 a          898 c          897 g          389 t
ORIGIN      
        1 gcccgtggcg atggcgaaca ccgtgtcgcc atcctgcggc gtatgcacgg gacggatggc
       61 gcgcgcgagc ccgtcctgcg ccatcaccgc caggcgcttg gcggacgcct tgtcgagccg
      121 ggcgttggtc gcgacaacgg caatggtggt gttggcgcgc ggatcgctgc gcgctgcatc
      181 ggccggatca tgggtgaggt cggcccgcgc gtgcgacacc gacaacgaaa ggccgtgcgg
      241 cggcggcagg ccgccgaact cggcctgctg ctcgagcgcc cacgcccaga attgcggcat
      301 gtcgcccatg gtggtgtagc cacgcgcatt caccgccacc agcgcgccga cctgtagccc
      361 gttcgacgaa tcgacggccg aggcgctgcc cagcccgccc ttgagattgc ccgccttggc
      421 gcccagcccg gcgccggcat tgccgagggc gaagtcggcc ccggccttgt cggccgccgc
      481 ataggcgagc tcgcgataag gcggccagtc ccagttcttg tcgccaccgt tcagcaggtc
      541 gaacaggatg gccgtgggca cgatcggcac gacgatatcg gccacggcat aaccccgacc
      601 ccgctccgtg agccaacgca tgacgccatc ggccgcggac agaccgaacg ccgagccgcc
      661 ggacaggcag accgcatcga tgcggtcgac ccggcacgac ggatcgagca gatcggtctc
      721 gcgcgtccct ggcccgccgc cgcgcacatc gaccgatgcc gtcgacgggt tctcgcacag
      781 gatgacgctg acgccggaac gcaggcgcgg gtcttcggcg ctgccgacca ggatgccgtc
      841 gacatcggtg atgaggttgc gcgggccggg gcggagcatg atcagtcgag ctgaagcgtg
      901 agggccttga gataggcggt ctcgggcagc ccaggatgca ccggatgatc gagcgccgcg
      961 cccgagctca gcaggatgcg gccactgcgg ctggcatcgc gcaggccgcg gcgcacctgc
     1021 tcggcaaaca gcggtggatc gacgaggtgc gagcaggagg cggcgaacag gaagccgccg
     1081 ggcgccacca gcggcgcggc cagccgcacc agcttgcgat agccctgcgc gccagtcttg
     1141 aggtccttgc ggcttttcac aaaggcgggc ggatcgcaga tcaccacgtc gaagctcttg
     1201 ccggcgagct tctccaaggc gtcgaacgcc tcgctctttt cgagcgagac gaccttgtcg
     1261 acgccgttca gggtcgctgc cgccttcgcc gcgtcgaggg ccgtttgcga gcgatcgacg
     1321 cagagcaccg atttggcgcc ctgcttggcc gccagcacgc cgaagccgcc gctgtagctg
     1381 tagacatcga ggacgcatgc gtcgccggcg agacccgcca tgaagcggcg attgtcgcgc
     1441 tggtcgtaga accagcccgt cttctggcca accgacaggt cggccacgaa gcgggcgccg
     1501 ttttcgacca gctcgatggc acccgaggcg tcgcccttga cgaccacggt ctcgcgcttg
     1561 aggccttcga gctcgcgcac cggcgaatcg ttcttgagca cgatcgtctt gggcgacagc
     1621 tcggcctcca gcgcttcgag caggaccggc gtcagaagct ccatgccggc ggtgttgacc
     1681 tgaaccacca gcgcctcgcc gaagcggtcg atgatcgtgc ccggcaggcc gtcggcctcg
     1741 gcatggatca ggcgatagta gggaacgccg accaggcggt cgcgcagcgc tgccgcctgc
     1801 gccaggcgtc gtccgaagaa cagcgcatcg acgaccgtct cgggattgga cgacagcacg
     1861 cgagcggcaa tcagcgaatg cggattgaag gtgacaagcc ccaacgcctc gccgctcggt
     1921 gcgcgcaggt tcgcaagcga gcccgccggc agcgccttgg tctcggcatc catcaggatc
     1981 tcgttggaga agacccaggg atggccggcg cggacgcggc gatcctcgcc ggcgcgcaac
     2041 aggacgctcg gcagtttctt ctgagccact ctattctccc ttggcgacgc cgtcgcgccg
     2101 cggatcggcg ccgccttccc aaccgtcttc tatccggcgc acgccggtca aaccaccgtc
     2161 atgcgcgcgg acttgtactt gatggcccag cgcgcgcaag ccgtcggcgc gggccatcgc
     2221 ggacgtccct tcctcgagct cggtcgggcc gttgagattg gcgatgcgcg gcagggcgat
     2281 ggcgtcctgc atcgagagct tccagtcgag cacgccgacg atggtctgca gcgtgtcgcc
     2341 gatgatgcgc gcgccgcccg ccgagcccag cgcagcgact agcttgtggt cactgtcgaa
     2401 gatcagggtg ggcgacatcg acgaacgcgg ccgcttgccg gcttcgaccc ggttggcgac
     2461 caaccgcccg tcgctttcgg gccgcggcga gaaatcggtg agctcgttgt tcagcaggaa
     2521 gccgcgcacc atgatctggg cgccgaacgg cgcctcgatg gtggtggtga agctcaccgc
     2581 attgccccag cgatcgacga tgctga
//
LOCUS       DASWGA010000372         4146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_424613, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000372 DASWGA010000000
VERSION     DASWGA010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4146
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424613"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VF991_08905"
     CDS             <1..323
                     /locus_tag="VF991_08905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556600.1"
                     /translation="DDVEMLVLRAAAWRNAGNPARAFDDAARALKLAPEHSEAMLERG
                     FASLARGERSQANNDFNAVLRLVPPSSIAARRAQAGLRGEQPAPATSDAPPTPPAAKG
                     GGKR"
     gene            358..1020
                     /locus_tag="VF991_08910"
     CDS             358..1020
                     /locus_tag="VF991_08910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556601.1"
                     /translation="MNRLSPSIAAVIAVLLATATGLAQTPSAGPASPQPPSSYYPAPP
                     PERAPTVEQGAPTSSLSSPLPASAPKVDRTEIASDAEAQLFADARKIVWGRYAMVKGA
                     KPGDVAVTRQGNLWIVKGRIDSVAPGSEGDWASIDGVVERISAGVVQVRGEVAFRVAK
                     VEKGTPCKVAGILNFRRSGKSQVWRLAEGDNPCDGMRENFDLVYEKPVEKKPVPAQPK
                     RS"
     gene            complement(1031..1483)
                     /gene="rnhA"
                     /locus_tag="VF991_08915"
     CDS             complement(1031..1483)
                     /gene="rnhA"
                     /locus_tag="VF991_08915"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEX9556602.1"
                     /translation="MSEPEVEIFTDGACSGNPGPGGWGAILRLGGREREFSGGDPATT
                     NNRMELMAAIMGLEALKRPCRVRLFTDSNYVREGVTKWIHGWKKNGWRTADKKPVKNV
                     ELWQRLDAARAPHHVDWIWVKGHSGHPENERADQLARDEIAKLRAAGL"
     gene            complement(1480..2430)
                     /locus_tag="VF991_08920"
     CDS             complement(1480..2430)
                     /locus_tag="VF991_08920"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEX9556603.1"
                     /translation="MAVYTEVGDAELEAFLAEYDIGEADSFKGVAEGVENSNYLLATT
                     RGQYFLTLYEKRVNPRDLPFFLGLMDHLAARGINCPRPIHGRDGNALRTLVGKPAAIT
                     TFLHGLWPRRILLQHCRPVGEALAALHLAGQDFSLKRPNALSVAGWRPLFDGSRGHID
                     PALQAELQSELNFFEQSWPAGLPSGVIHADLFNDNVLFLHDRLSGLIDFYFACNDAFA
                     YDVAICLNAWCFEADGSFNATKARALLQGYGGVRPLGEDERKVLPLLARGSALRFLLT
                     RLYDWLHTPADALVKRKDPQEYLAKLRFHRDTKSIADYGL"
     gene            complement(2441..3391)
                     /gene="ispH"
                     /locus_tag="VF991_08925"
                     /gene_synonym="lytB"
     CDS             complement(2441..3391)
                     /gene="ispH"
                     /locus_tag="VF991_08925"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEX9556604.1"
                     /translation="MTRSNKSLTILLASPRGFCAGVERAIQIVERAIERYGRPVYVRH
                     EIVHNRYVVEALEAKGAIFVDELDEVPDGRPVVFSAHGVPKAVPAEAARRHLLAVDAT
                     CPLVSKVHHEAERHFAAGRTVVLIGHAGHPEVIGTMGQLPAGAVLLVKNVAQAEALAV
                     RDPSNLAYATQTTLSVDDTIGIVTALRRRFPAIQGPKREDICYATANRQAAVKAIVPG
                     CDALVVIGAPNSSNSMRLVEVAASHGCARSRLVQRAADMDWAWLEGVQRLGITAGASA
                     PETLVDEMVAACRERYDVTVEEVRTIEENVVFKLPRSLVA"
     gene            3513..3755
                     /locus_tag="VF991_08930"
     CDS             3513..3755
                     /locus_tag="VF991_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0106034 - protein maturation by [2Fe-2S]
                     cluster transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HEX9556605.1"
                     /translation="MTEPVVAARAPAKVMLEAGKDYWWCACGQSKNQPFCDGSHKGGL
                     FTPMKYTAAKEGDHWLCACKHSNNKPLCDGTHKTLA"
     gene            3752..>4146
                     /locus_tag="VF991_08935"
     CDS             3752..>4146
                     /locus_tag="VF991_08935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556606.1"
                     /translation="MIDRRFVLLAPLGLALSLGACGWFGGGSSSSDTTNVYCPAPLTV
                     QDAQRLTHFKDGPGRDPRDIVYEAAMIASGTTCELNRNQLNVNLVMRISVSAGPSVDP
                     GATRVPYFVRVINAGGTVVQGQEFIADFRL"
BASE COUNT          689 a         1396 c         1394 g          667 t
ORIGIN      
        1 ccgacgacgt cgagatgttg gtgctgcgtg cggcggcctg gcgcaacgcc ggcaatccgg
       61 cgcgcgcatt cgacgacgct gcgcgcgcgc tcaagctcgc gccggagcat tccgaggcca
      121 tgctcgagcg cggcttcgcc agtctggcgc gcggcgagcg cagccaggcc aacaacgatt
      181 tcaacgcggt gctgcgcctg gtgccgccca gttcgatcgc ggcgcgccga gcccaagcag
      241 gcttgcgcgg cgagcagccg gctccggcga cgtccgatgc gccgccaacc ccgcctgccg
      301 ccaagggcgg cggcaaacgg tagcgtcgct ccttcctctg atgtaagagc cacaggaatg
      361 aaccgactct ccccgtcgat cgccgccgtg atcgccgttc tgcttgcgac ggcgacaggc
      421 ttggcccaga cgccgtccgc cggcccggcg tcgcctcaac cgccgtcctc ctattatcct
      481 gcgccgccgc ccgaacgggc gccgacggtc gagcagggcg cgccgaccag cagcctgtct
      541 tcgccgctgc cggccagcgc gcccaaggtc gaccgcaccg agatcgcttc ggacgccgag
      601 gcccagcttt tcgccgacgc gcgcaagatc gtgtgggggc gctatgccat ggtgaagggc
      661 gccaagcccg gcgacgtcgc ggtgacccgg cagggcaatc tctggatcgt caagggtcgc
      721 atcgatagcg tggcgcccgg cagcgagggc gactgggcgt cgatcgacgg cgtcgtcgaa
      781 cgtatttcgg ccggcgtcgt gcaggtccgc ggcgaggtcg cctttcgcgt cgccaaggtc
      841 gagaagggca cgccctgcaa ggtggcgggc atcctcaatt tccgccgctc gggcaaatcc
      901 caggtgtggc gcctcgccga gggcgacaat ccctgcgacg gcatgcgcga gaatttcgac
      961 ctggtctacg aaaagccggt cgagaaaaag ccggtgccgg ctcagcccaa gcggagttga
     1021 atcgtcgggt ctacagaccg gcggcccgca gcttggctat ttcatcgcgc gccaactgat
     1081 cggcgcgttc gttctcggga tggccgctat ggcccttcac ccagatccag tcgacgtggt
     1141 gcggcgcgcg ggccgcgtca agacgctgcc atagctcgac attcttcacc ggcttcttgt
     1201 cggcggtgcg ccagccgttc ttcttccagc cgtggatcca tttggtcacg ccttcgcgga
     1261 catagttgct gtcggtgaac aggcgcaccc ggcagggccg cttcagcgct tccagtccca
     1321 tgatcgcggc catcagctcc atgcggttgt tggtggtcgc cggatcgccg ccggagaact
     1381 cgcgttcgcg gccgccgaga cgcaggatcg cgccccagcc gcccggtccg ggatttccgc
     1441 tgcaggcgcc gtcggtgaag atctcgactt ccggttcgct cacagtccgt agtccgcgat
     1501 cgacttggta tcgcgatgga agcgcagctt ggccaggtat tcctgcgggt ccttgcgctt
     1561 gaccagcgcg tcggccggcg tgtgcagcca atcgtaaagc cgtgtcagca gaaagcgcag
     1621 cgccgatccc cgcgccagca gcggcaggac cttgcgctca tcctcgccga gtgggcgcac
     1681 gccgccatag ccctgcagca gcgcgcgcgc cttggtggcg ttgaacgagc cgtcggcctc
     1741 gaagcaccag gcattgaggc agatcgcgac atcgtaggcg aaggcgtcgt tgcaggcgaa
     1801 gtagaagtcg atcaggcccg acagcctgtc gtgcaggaag agcacattgt cgttgaacag
     1861 gtcggcatgg atgactccgg acggcaggcc cgcgggccag ctctgctcga agaagttgag
     1921 ctcgctctgc aactcggcct gcagagccgg gtcgatgtgc cctcgcgagc cgtcgaacaa
     1981 aggccgccag cccgccaccg acagcgcgtt gggccgcttg aggctaaaat cctggccggc
     2041 gagatgcagc gccgccaatg cctcgccgac cggccggcaa tgctgcagca ggatgcggcg
     2101 cggccacagg ccgtgcagga acgtcgtgat ggcggccggc ttgccgacga gcgtgcgcag
     2161 cgcgttgccg tcgcgaccat ggatcggccg tgggcaattg ataccccgcg cggcaagatg
     2221 gtccatcagg ccgaggaaga acggcaggtc ccgagggttg acgcgctttt cgtaaagcgt
     2281 gaggaaatat tggccgcgtg tcgttgcgag caggtagttg gaattctcga caccctctgc
     2341 gacgcccttg aaagagtccg cttcgccgat gtcgtactcg gcgagaaagg cttcgagctc
     2401 ggcgtcgccg acttcggtat agaccgccat caggccatcc ctacgccacg agcgagcgcg
     2461 gcagcttgaa cacgacgttt tcctcgatcg tgcgcacttc ctcgacggtc acgtcgtagc
     2521 gttcgcggca ggcggcgacc atctcgtcga ccagcgtctc gggcgccgag gcgccggccg
     2581 tgatgccaag gcgctgcacg ccctcgagcc aggcccaatc catgtcggcg gcgcgctgca
     2641 ccaggcgcga cctggcgcag ccgtggctgg ccgccacttc gacaagtcgc atggagttgg
     2701 acgagttggg cgcgccgatc accaccagcg cgtcgcaacc cggcacgatg gctttcaccg
     2761 cagcctgacg attggccgtg gcatagcaga tgtcctccct cttggggccc tggatggcgg
     2821 gaaagcggcg gcgcagcgcg gtcacgatcc cgatcgtgtc gtcgaccgac aaggtcgtct
     2881 gcgtggcata ggcgaggttg gacgggtcgc gcacagcaag agcctcggcc tgcgccacgt
     2941 tcttgaccag cagtacggcg ccggcgggaa gctggcccat ggtgccgatc acctcgggat
     3001 ggccggcatg gccgatcagc acgaccgtgc ggcccgcagc gaaatgccgc tcggcttcgt
     3061 gatggacctt ggagaccagc gggcaggtgg cgtcgacggc gagaagatgg cggcgggcgg
     3121 cctccgccgg caccgccttg ggcacgccgt gggcggagaa caccacgggg cggccgtccg
     3181 gcacctcgtc gagctcgtcg acgaagatcg cgcccttggc ctcgagagcc tcgacgacgt
     3241 aacggttgtg cacgatctcg tggcggacat agaccggccg gccgtagcgc tcgatggcgc
     3301 gctcgacgat ctggatggcc cgttcgacgc cggcgcagaa gccacgcggg ctggcgagca
     3361 gtatcgtgag cgacttgttt gacctggtca tgcgacaacg ttcagcttgg ctgcccccgc
     3421 tcgcttgcag gtctgcagac cattgcctag actcctcccg gaaacggatt ggcgcggcac
     3481 cgtaacaaag ccgccgcaac ggggaaagca acatgaccga gccggttgtc gcggcgaggg
     3541 cgccagcgaa agtgatgctg gaggccggaa aggactactg gtggtgcgcc tgcggccaaa
     3601 gcaaaaacca gccgttttgc gacggcagcc acaagggcgg cctcttcacg ccgatgaagt
     3661 acacggcggc caaggaaggc gaccattggc tctgcgcctg caagcactcc aacaacaagc
     3721 cgctttgcga cggcacgcac aagaccctgg catgatcgac aggcgattcg ttcttttggc
     3781 gccgcttggc ctggcgctgt cgctgggcgc ttgcggctgg ttcggtggcg gcagctcgtc
     3841 gagcgacacc accaacgttt attgcccggc gccgctcacg gtccaggacg cccagcgtct
     3901 cacccatttc aaggacgggc cgggccgcga cccgcgcgac atcgtctatg aggccgcgat
     3961 gatcgcctcg ggcaccacct gcgagctcaa ccgcaaccaa ctcaacgtca acctggtcat
     4021 gcgcatctcg gtcagcgccg gtccgtcggt cgatccgggc gcgacccgcg tgccctactt
     4081 cgtgcgcgtg atcaacgccg gcggcactgt cgtgcagggc caggaattca tcgccgactt
     4141 tcgcct
//
LOCUS       DASWGA010000373         1546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_48582, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000373 DASWGA010000000
VERSION     DASWGA010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48582"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1455
                     /locus_tag="VF991_08940"
     CDS             <1..1455
                     /locus_tag="VF991_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556607.1"
                     /translation="LTLLAILGALLGALVAAPSRAQAPRPDAATLARTGILERLAERT
                     GVYGIPPTAKTPGFIADAGWPQKLPRNWIIGQVGGLYVAPDDHIWIYQRPRTLTNDEA
                     ALTDATNKAKDGKPVDPMGFLRPYGALGDCCLPAPSVMEFDSNGKLLRAWGGPADPDK
                     CKMEEGCVWPASEHGIFVDHNGFVYLGGNSANGDPNGSAWASSNGADGMILKFTKDGK
                     FVMMIGGPGAKGPDSNNKNRGRNGTPQFYLPSDITVDPTDNRMYISDGYGNRRVVIVD
                     AATGKYIGHFGAYGNNPIDDKAAAAAGIWMNDLTKGNMKPAFFRTPVHCVKISKEGLI
                     YVCDRGNNRLQVFNGRDPNLGKECANPAGEVGKCGFVKEQFVSVKTNGLPGSAVSMNF
                     STDAKQSCLYVGDNSNMTIYVLKRDTLEELGRLGQSGREAGEFHWLHQVSLDSRGNIY
                     TAEVDTGKRIQKFIRYGDAGCSGTGRATVGGVLP"
BASE COUNT          305 a          496 c          495 g          250 t
ORIGIN      
        1 ctgacactgc tcgccattct cggcgctctg ctcggcgccc ttgtcgccgc gccaagccga
       61 gcccaggcgc ccaggcccga tgccgcaacg ctcgccagga ctggcattct ggagcggctc
      121 gccgagcgca ccggcgtcta cggcataccg ccgaccgcga agacgccggg ctttatcgcc
      181 gacgccggct ggccgcagaa gctgccccgc aactggatca tcggccaggt cggcggcctt
      241 tatgtcgcgc ccgatgatca catctggatc taccagcggc cgcgcacgct gacgaacgac
      301 gaggcggcgc tgaccgatgc caccaacaag gctaaggatg gcaagcccgt cgacccgatg
      361 ggctttctac gtccctacgg agcacttggc gactgctgcc tgccggcgcc atcggtcatg
      421 gagttcgatt cgaacggaaa gctgctgcgt gcctggggtg gcccggccga tcccgacaag
      481 tgcaagatgg aggaaggttg cgtctggccg gccagcgagc acggcatctt cgtcgaccac
      541 aacggctttg tctatctcgg cggcaacagc gccaacggcg atcccaacgg ctcggcctgg
      601 gcatcgagca acggcgccga cggcatgatc ctgaaattca ccaaggacgg caagtttgtg
      661 atgatgatcg gcggtccggg cgccaagggg ccggacagca acaacaagaa tcgcggccgc
      721 aacggcacgc cgcagttcta tctgccgtcc gacatcacgg tcgatccgac cgacaaccgc
      781 atgtatattt cggacggcta cggcaatcgc cgcgtggtca ttgtcgatgc cgccaccggc
      841 aagtatatcg gccatttcgg cgcctacgga aacaacccga tcgacgacaa ggccgccgcc
      901 gctgccggca tctggatgaa cgatctcacc aagggcaaca tgaagccggc cttcttccgc
      961 acgccggtgc attgcgtgaa gatcagcaag gaaggcctga tctatgtgtg cgaccgcggc
     1021 aacaaccgcc tgcaggtctt caacggccgc gatcccaacc tcggcaagga atgcgcgaac
     1081 ccggccggcg aggtgggcaa gtgtggcttc gtcaaggagc agttcgtgtc ggtgaagacc
     1141 aacggcttgc cgggctcggc ggtctcgatg aacttctcga ccgacgccaa gcaatcctgt
     1201 ctctatgtgg gcgacaactc caacatgacg atctacgtgc tgaagcggga cacgctggag
     1261 gagctcggcc ggcttgggca gagcgggcgt gaagccggcg agttccactg gctacaccag
     1321 gtcagccttg attcccgcgg taacatctac acggccgaag tcgacaccgg gaagcgcatc
     1381 cagaagttca tccgctacgg ggacgcaggc tgtagcggta ccggccgggc gaccgtcggc
     1441 ggcgtgctgc cataggtcgt cggtgattga tgacggacgg taacggcatt aggaccgaaa
     1501 tgaatgtggc ggcttctcgt ggaggcaggc gatcgggagc tcggcc
//
LOCUS       DASWGA010000374         5221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1945781, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000374 DASWGA010000000
VERSION     DASWGA010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5221
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1945781"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="VF991_08945"
     CDS             <1..540
                     /locus_tag="VF991_08945"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9556608.1"
                     /translation="RPDVSFVLEESSSSDLLAGLREERLDIAFIRSGLADTGGLAVHA
                     LLQEDMAAALPSRHRLARRPHLGLKDLAAETFILYRRPDGRGLYDVIIAACAAAGFSP
                     HVGQEAPRIVSTLNLVAAGLGITIVPASLSRLPLEGVTYRPLTGRPALKVPLNLACRA
                     DERSAATLGFIDLVRRLRE"
     gene            complement(509..1936)
                     /locus_tag="VF991_08950"
     CDS             complement(509..1936)
                     /locus_tag="VF991_08950"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9556609.1"
                     /translation="MITARSGPCEAEAIRSTRGTAPCAAHQKRWVLAATILASTIAYV
                     DESVVNIALPVIGRDLSAAAATLQWVINAYTLCLAAFLLVGGAAGDRLGRRRVFIAGV
                     VLFAVASLGCGLARDVAQLIAARAVQGIGAALLIPCSLAIIGAAFPEAERGRAIGTWA
                     GFSAISAAIGPLLGGWIVDHLPWQAIFFINPILGLAALWIAWRHLPESIDPQAPAVID
                     WLGALLVFAGLGSVAYGLIALPDGGWQDMSIVAVLAGGVVLLALFVWHEAHAPAPMMP
                     LGLFRSVPFSGVNALTLLLYGALGGAFFLLPFDLISVHGYSATMAGAVFLPFTAIMAA
                     LSRWSGGLLDRFGARLPLIAGPAIVAVGFALFALAGPQASFAMAFLLPVSIVGLGMAV
                     TVAPLTATVIAAVPGHQTGVASGINNAVSSVASLFAIAAFGALALHGSLAEGIRLAML
                     MAAALALAGAACAAATIRAAAAPDR"
     gene            1951..2541
                     /locus_tag="VF991_08955"
     CDS             1951..2541
                     /locus_tag="VF991_08955"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HEX9556610.1"
                     /translation="MTTIKTIGIKTIGIKTIGHSNHPIQRFVDLLTAGGVKLLVDVRS
                     LPWSRRFPQFGKERLTQSLADAGIAYVHESALGGKPEGRGKPEGGASYDALAARPAFN
                     AALARLIDRAQDTTVCLMCAEKEPLDCHRTVLVSRRLAERGVAIEHLLADGATRPHSD
                     VEEALLAKSAGPDLFEDRAARLARAYQARERAMKRA"
     gene            2667..3047
                     /locus_tag="VF991_08960"
     CDS             2667..3047
                     /locus_tag="VF991_08960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011438939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEX9556611.1"
                     /translation="MRIIAVLLVAVVALSHLGFLVLEMFYWNHPIGRQIFETTPEFAA
                     ASAVLAANQGLYNGFLAAGLIWGLVSGRRDVKVFFLCCVIAAGVYGGLTAKMSILYIQ
                     GAPALAALIAVLAARPPRTRHYRL"
     gene            complement(3064..4245)
                     /gene="solA"
                     /locus_tag="VF991_08965"
     CDS             complement(3064..4245)
                     /gene="solA"
                     /locus_tag="VF991_08965"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF008425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HEX9556612.1"
                     /translation="MPAAYDVAVLGLGAMGAAAAYQLAKCGARVLGIDRYAPPHEFGS
                     THGDTRITRIACGEGPEYSAFAARSHEIWRELEAELGIELLTQNGFLVICGSGERAAN
                     HGVPKFLEATVAAAKAANVGHEILDTATIRRRHPAFKVADGDQAYYDAVGGFVRPERC
                     IAAQLQRAKALGADLRLDEKVISFEQTSGSVTVSTDKATYHAKELIVAAGAWLPEFLE
                     PALAANFKVTRQVLYWFRARGAREHAQFSPERCPVYIWQIPAPQVVYGFPAVGDLEEG
                     VKLATEQYDVSTTPDSVARSASSQEIRDMYETYVGPYFPGLSPLCVRHKVCLYTWVDG
                     ARFIIDRHPDFNRIIVASPCSGHGFKHSAGIGELLARMALGEHHGDIAKFAFGYTPPT
                     S"
     gene            complement(4293..4367)
                     /locus_tag="VF991_08970"
     tRNA            complement(4293..4367)
                     /locus_tag="VF991_08970"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4333..4335),aa:Gln,seq:ttg)
     gene            complement(4433..4948)
                     /locus_tag="VF991_08975"
     CDS             complement(4433..4948)
                     /locus_tag="VF991_08975"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEX9556613.1"
                     /translation="MSIDQAAFKKGMRHLAASVTLITTRHRELRGGLTATAVCSVSAE
                     PPQLLVCVNKTASAHDPIGEAGFFCVNILAPQHRKIAERFAGMDGVEGDERFHDMGEW
                     STLSTGAPVLKGCPVSFDCRLVTRVAAGTHTIYIGEIVDLALDPAASALLYCDGVFVH
                     GDALKKAAEAA"
     gene            complement(5012..>5221)
                     /locus_tag="VF991_08980"
     CDS             complement(5012..>5221)
                     /locus_tag="VF991_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556614.1"
                     /translation="TRRHDVPQRDIGGGIGGEPGVGLSHAGPTVTAGRDRATAKNDTL
                     MKVLLQRSNCSLPEFSGNFACRPCG"
BASE COUNT          898 a         1771 c         1794 g          758 t
ORIGIN      
        1 cggcccgacg tctccttcgt gctggaggaa agcagctcca gcgacctttt ggccggcctg
       61 cgcgaggagc ggctggacat cgccttcatc cgctccggcc tcgccgatac cggcgggctc
      121 gcggtgcacg cgctgctgca ggaggacatg gcggccgccc tgccctcgcg ccatcgcctc
      181 gcgcgccggc cgcacctggg gctaaaagac ctcgcggccg agaccttcat cctctaccgc
      241 aggcccgacg ggcgcggcct ttacgacgtc atcatcgcgg cctgcgcggc ggcaggcttc
      301 agcccgcatg tcggccagga ggcgccgcgc atcgtctcca ccctcaatct cgtggcggcc
      361 gggctcggca tcaccatcgt gccggcctcc ctgagccgcc tgccgctgga aggcgtgacc
      421 taccgcccgc tgacaggccg gcccgccctg aaggtgccgc tcaacctcgc ctgtcgcgcc
      481 gacgagcgct cggccgcgac cttgggcttc atcgatctgg tgcggcggct gcgcgaatag
      541 tcgccgccgc gcaggcggca ccggccaatg ccagggccgc cgccatcagc atggcgagcc
      601 ggatgccctc ggccagcgaa ccgtgcagcg ccagcgcgcc gaaagcggcg atggcaaaca
      661 ggctcgccac cgaggacacg gcattgttga tgcccgaggc cacgccggtc tggtggccgg
      721 gaacggcggc gatgaccgtg gccgtgagcg gcgccaccgt caccgccatg ccgagaccga
      781 cgatcgacac cggcagcagg aaagccatcg cgaacgacgc ctgcggcccg gccagggcga
      841 acagcgcgaa gcccacggcg acgatggccg gaccggcgat cagcggcagc cgcgcgccga
      901 agcgatcgag caggccgccc gaccagcgcg acagcgccgc catgatcgcg gtgaaaggca
      961 ggaacaccgc acccgccatg gtcgccgaat agccgtgcac ggagatcaga tcgaacggca
     1021 gcaggaagaa ggcgccgccg agcgcgccgt agagcaggag tgtgagcgca ttgacgccgc
     1081 tgaaggggac cgagcggaag aggccgagcg gcatcattgg cgcgggggcg tgcgcttcat
     1141 gccacacgaa caacgccagc agcacgacgc cgcccgcgag aacggcgacg atcgacatgt
     1201 cctgccagcc gccgtcgggc agcgcgatca agccgtaggc cacgctgccc aagccggcaa
     1261 agaccagcag ggcacccagc caatcgatga cggcgggggc ctgcggatcg atgctttccg
     1321 gcagatgacg ccaggcgatc cacagcgctg ccaggccgag aatggggttg atgaaaaaga
     1381 tcgcctgcca gggcaggtga tcgacgatcc agccgcccaa cagcgggccg atcgcagcgg
     1441 aaatcgccga gaaaccggcc caggtgccga tggcgcggcc gcgctcggcc tcgggaaagg
     1501 cggccccgat gatggcgagc gagcagggaa tgagcagcgc cgcgccgatg ccctgcaccg
     1561 cccgcgccgc aatcaattgc gccacgtcgc gcgcgaggcc gcagcccagc gaggccacgg
     1621 cgaacagcac cacgccggcg atgaagacgc ggcggcggcc cagccggtcg ccggcagcac
     1681 cgccgaccag cagaaaagcc gcgaggcaga gcgtgtaggc attgatcacc cattgcagcg
     1741 tcgccgccgc cgctgagaga tcgcggccga tcaccggcag ggcgatgttg accacggact
     1801 cgtcgacata ggcgatggtc gacgccaaga tcgtcgccgc caggacccag cgcttctggt
     1861 gcgccgcgca gggcgccgtg ccgcgcgtcg aacggatggc ctcggcctcg cacggccccg
     1921 accgggccgt gatcatggga tcgctcgcca atgacaacca tcaagaccat cggcatcaag
     1981 accatcggca tcaagaccat cggccattcc aaccatccca ttcaacgctt tgtcgatctc
     2041 ctgacggcgg gcggcgtgaa gctgctggtc gacgtgcgct ccctgccgtg gtcgcgccgt
     2101 tttccgcaat tcggcaagga gcggctgacc caatcgttgg ccgacgccgg catcgcctat
     2161 gtccatgaaa gcgcgcttgg cggcaagcct gaagggcgcg gcaagcctga aggcggcgcc
     2221 agctacgacg cgctggcggc acggcctgcg ttcaacgccg cgctcgcccg tctgatcgac
     2281 cgcgcacaag acaccacggt ctgcctgatg tgcgcggaga aagaaccgct cgactgccat
     2341 cgcaccgtgc tggtgtcgcg ccggctagcc gagcgcggcg tcgccatcga gcatcttctg
     2401 gccgacggcg ccacgcgccc gcattctgat gtcgaggaag cgctgctcgc caagagcgcc
     2461 ggacccgacc tgtttgagga tcgcgcggcg cggcttgccc gcgcctatca ggcgcgcgaa
     2521 cgcgctatga agcgcgcctg agcgaggggc ggccggcctg atgcgcctgc gaaaagagca
     2581 acgactgtaa caaagtcgcg gccgaggcgc cgcttggcgt cgggccgagg cgtgctaggg
     2641 tttgcccaac gggggagacc gagacgatgc ggatcatcgc agtgctgctc gtggccgtgg
     2701 tggcgttgag ccacctgggc ttcctggtcc tcgagatgtt ctattggaac catccgatcg
     2761 gccggcagat attcgagacg acgccggagt tcgccgcggc gtcggcggtg ctggccgcca
     2821 accagggcct ctataacggc tttctcgccg ccggcctgat ctgggggctg gtgagcggac
     2881 gacgcgacgt caaagtcttc ttcctgtgct gcgtgatcgc ggccggggtc tatggcgggc
     2941 tgaccgccaa gatgtcgatc ctctacatcc agggcgcccc ggcgctggcg gcgcttatcg
     3001 ccgtactggc ggcgcggccg ccgcgcacgc ggcactaccg gctctagacg ttcggtcccg
     3061 ccttcaggat gtcggcggcg tgtagccgaa agcgaacttg gcgatgtcgc catggtgctc
     3121 gcccagcgcc atgcgggcga ggagctcgcc gatgccggcc gaatgcttaa aaccgtgtcc
     3181 cgagcagggc gaggcgacga tgatgcggtt gaagtcagga tggcggtcga tgatgaagcg
     3241 ggcgccgtcg acccaggtgt aaaggcagac cttgtgcctg acgcagaggg gcgacaggcc
     3301 ggggaaataa ggcccgacat aggtctcgta catgtcgcgg atttcctgcg agctggccga
     3361 gcgggcgacg gagtccggcg tcgtcgagac gtcgtactgt tcggtcgcga gcttgacgcc
     3421 ctcttccagg tcgccgacgg cggggaagcc gtaaacgacc tggggtgccg gaatctgcca
     3481 gatatagacg gggcaccgct cgggcgagaa ttgcgcatgt tcgcgggcgc ccctggcgcg
     3541 gaaccaatag agcacctggc gggtgacctt gaagttggcg gcgagtgcgg gctcgaggaa
     3601 ttcgggcagc cacgcccccg ccgccacgat cagttctttg gcgtggtacg tcgccttgtc
     3661 ggtgcttacc gtgaccgagc cgctcgtctg ctcgaaggag atgaccttct cgtcgagccg
     3721 cagatcggcg cccagcgcct ttgccctttg caattgggcg gcgatgcatc tctccgggcg
     3781 cacgaagccg ccgacggcgt cgtagtaggc ctgatcacca tccgcgacct tgaaggcggg
     3841 atggcgccgg cggatcgttg ccgtgtcgag gatctcgtgg ccgacgttgg cggctttcgc
     3901 ggcggcgacc gttgcctcga ggaatttcgg cacgccgtgg ttggcggccc gttcgcccga
     3961 tccgcaaatc accaggaagc cgttctgggt gagaagctcg atgccgagct cggcttcgag
     4021 ctcgcgccag atttcgtgcg agcgcgcggc gaacgccgaa tactccggcc cttcgccgca
     4081 ggcgatgcgg gtgatgcgcg tgtcgccatg ggtcgatccg aattcatgcg gcggcgcgta
     4141 gcggtcgatg cccagcaccc tggcgccgca cttggccagt tgataggccg ccgccgcccc
     4201 catggccccc aaaccgagga ccgcgacatc gtaggctgcc ggcattcgtg gcgttccgat
     4261 tcgttagacc cgcaaggcga tggcaagggg actggctggg gcgccaggat tcgaacctgg
     4321 gaatggagga atcaaaatcc tctgccttac cacttggcta cgccccaaaa tcacatcagg
     4381 cgggcggaac atagtggctt agggaatggc gcgaaagtcg ttaatccggc ggttacgccg
     4441 cctcggccgc cttcttcagg gcgtcgccgt gcacgaagac gccgtcgcaa tagagcagcg
     4501 ccgacgccgc cggatcgagc gccaggtcga cgatctcgcc gatatagatc gtgtgcgtgc
     4561 cggcggcgac ccgggtcacc agccggcagt cgaacgacac cgggcagccc ttcaacaccg
     4621 gcgcgccggt cgacagggtc gaccattcgc ccatgtcgtg gaaacgctcg tcgccctcca
     4681 cgccgtccat gccggcaaag cgctcggcga tcttgcggtg ctgaggcgcc aggatgttga
     4741 cgcagaagaa gccggcctcg ccgatcggat cgtgggcgga ggccgtcttg ttgacgcaga
     4801 ccaggagctg cggcggctcg gccgacaccg aacagactgc cgtcgcggtc agcccgccgc
     4861 gcaactcgcg gtgccgggtg gtgatcagcg tgacgctcgc cgcgaggtgg cgcatgccct
     4921 tcttgaaggc agcctgatcg atgctcatgg ccccgactct agggcagccc ggcggtcggc
     4981 cgccaccgga aacggccgcg gccgcggccg gctaaccgca tggccggcaa gcgaaattgc
     5041 cagaaaactc cggcaaactg cagttggacc gctgcaataa aaccttcatc agagtgtcgt
     5101 tctttgcggt tgcccggtcg cggccggccg ttaccgtcgg acctgcatgg ctcaacccga
     5161 caccgggctc gcccccgata ccgcccccga tgtcgcgctg cggcacatcg tggcggcgtg
     5221 t
//
LOCUS       DASWGA010000375         3028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1565535, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000375 DASWGA010000000
VERSION     DASWGA010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3028
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1565535"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VF991_08985"
     CDS             complement(<1..263)
                     /locus_tag="VF991_08985"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the hydrolytic cleavage of imides that
                     range from linear to heterocyclic and that include
                     hydantoins, dihydropyrimidines, and phthalimides; Derived
                     by automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HEX9556615.1"
                     /translation="MAEYDLVIRNTTIATASDVVKGDIGVSSGRVVALGERLDKGRKE
                     IDATNLIAVPGGIDAHVHFDQDTADGSVFCDDFESGSRAAAAGG"
     gene            383..1384
                     /locus_tag="VF991_08990"
     CDS             383..1384
                     /locus_tag="VF991_08990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9556616.1"
                     /translation="MNRWIGPLVALLGMGTLAASAVAQTAIKPAIVYSTGGKFDKSFN
                     EGVSQGAEKFKKETGVVIAEFEPNNETQFEQAHRRFAQRGQDPIVAVGFSQAVALEKV
                     AKEFPNIHFTIIDSVVDLPNVQSVVFKEQEGSFLVGVLAALASKSGKVGFVGGMDIPL
                     IRRFQCGFEQGVKYANPKAEIIANMTGTTPAAWNDPGRGAELAKGQFDRGVDVVYAAA
                     GSTGIGVLQAAKDRGKLSIGVDSNQNHLHPGSVLTSMLKRVDLAAYNSFKAAQAGTWK
                     AGTQVLGLKEGGVDWALDKDNEKLITADMKAKVDAAKADIVSGKIVVHDYMSNNSCK"
     gene            1375..2898
                     /locus_tag="VF991_08995"
     CDS             1375..2898
                     /locus_tag="VF991_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011423581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556617.1"
                     /translation="MQVTPAIELSGIHKSFGSVHAVRGVSLRIDKGAITGIVGENGAG
                     KSTLMSILYGLYRADAGEIRIDGRAVAMESPHDAIAQGIGMVHQHFMLVDTFTVLENL
                     VLGAEGGPLLAGGLAAARAELARLAREYGLSVNPDARVADLSVGEQQRVEILKVLFRG
                     ARILILDEPSAVLTPQETDQLFRILATLKERGVTVVLITHKLREIMAATDHVYVMRQG
                     EMVADRPTIDTSPEELAELMVGRKVLLQLDKSASRPGEVLLRAEHLTLIDDRGVRLLD
                     DVGLELRAGEIVGIAGVSGNGQSELLQILSGIRAPTSGRLTVCGRAIDASQPCDPAEM
                     RNLRLAHVPEDRLRQGMVAAFQAAETAILGYQEKPPYCRHYLLDGPAVGAHCAALMER
                     FDVRPRAPGLRSSSFSGGNQQKLVLAREMARQPKVLLVGQPTRGVDIGAIEFIHREVV
                     KSRDQGCAVLVVSVELEEILSLADRILVMFAGRIMGEVPAGRADERTLGLMMAGAKA"
BASE COUNT          520 a         1014 c         1013 g          481 t
ORIGIN      
        1 ccgccggccg ccgccgcccg gctgccgctc tcgaaatcgt cgcagaacac cgacccgtcg
       61 gcggtgtcct ggtcgaaatg gacatgggcg tcgatgccgc ccggcacggc gatcaggttc
      121 gtggcgtcga tctccttgcg gcccttgtcg agccgctcgc cgagcgccac gacgcggccg
      181 ctcgatacgc cgatatcgcc cttcacgaca tctgaagccg tggcgatggt ggtattgcga
      241 atgacgagat cgtactcggc catggatcct ccgcgcggcg ggcgggcagc gtctggatag
      301 caagtcccgt gccgctaaat tccctgccta gacccggccc gcgctcaggt ccacactcct
      361 gtcaacgaac gagggagccg tcatgaatcg ctggatcgga ccgctggtcg ccttgcttgg
      421 gatggggaca ctagccgcat ctgcggtggc gcagaccgcc atcaagcccg ccatcgtcta
      481 cagcaccggc gggaaattcg acaagtcctt caacgaaggc gtgagccagg gcgccgagaa
      541 attcaagaag gaaaccgggg tcgtcatcgc cgagttcgag cccaacaacg agacccagtt
      601 cgagcaggcg catcgacgat ttgcccaacg cgggcaggat cccatcgtcg ccgtcggctt
      661 ctcgcaggcc gtggcgctgg agaaggtcgc caaggagttc cccaacatcc acttcaccat
      721 catcgacagc gtcgtcgacc tgcccaacgt gcagtcggtc gtgttcaagg aacaggaagg
      781 ctcgttcctg gtcggcgtcc tggcggcact ggcgtcgaag agcggcaagg tgggcttcgt
      841 gggcggcatg gacatcccgc tgatccgccg cttccagtgc ggcttcgagc agggcgtcaa
      901 gtacgccaat cccaaggccg agattatcgc caacatgacc ggcacgacgc cggccgcctg
      961 gaacgatccc ggccgcggcg ccgagctcgc caagggccag ttcgaccgcg gtgtcgacgt
     1021 cgtctatgcc gccgccggct cgaccggcat cggcgtgctg caggccgcca aggaccgcgg
     1081 caagctcagc atcggcgtcg attccaacca gaaccacctg catcccggct cggtcctgac
     1141 ctcgatgctg aaacgcgtcg acctggccgc ctacaacagt ttcaaggcgg cgcaagccgg
     1201 cacctggaag gccggcacgc aggtgctcgg cctcaaggaa ggcggcgtcg actgggcgct
     1261 cgacaaggac aacgagaagc tgatcaccgc cgacatgaag gccaaggtcg atgccgccaa
     1321 ggccgacatc gtgtcgggca agatcgtcgt ccacgactat atgagcaaca attcctgcaa
     1381 gtgactcccg ccatcgagct ttcggggatt cacaagtcgt tcggcagcgt gcacgccgtg
     1441 cgcggcgtat cgcttcggat cgacaaaggc gccatcaccg gcatcgtcgg cgagaacggc
     1501 gccggcaagt cgaccctcat gagcatcctc tacggcctct atcgcgccga tgcaggtgag
     1561 atccgcatcg acggccgcgc ggtggccatg gaaagcccgc acgatgccat cgcccagggc
     1621 atcggcatgg tccaccagca tttcatgctg gtcgacactt tcaccgtgct ggagaacctg
     1681 gtgctgggcg ccgaaggcgg cccgctgctg gccggcggac tggcggcggc gcgcgccgag
     1741 ctcgcgcggc tggcccgcga atacggcctg tcggtcaatc ccgatgcacg cgtggccgat
     1801 ctgtcggtcg gcgagcagca gcgggtcgag atcctgaaag tgctgttccg cggcgcgcgc
     1861 atcctcattt tggacgagcc cagcgccgtg ctgacaccgc aggagaccga ccagcttttc
     1921 cgcatcctgg cgaccctgaa ggagcgcggc gtcaccgtgg tgctgatcac ccacaagctg
     1981 cgcgagatca tggcggccac cgaccatgtc tatgtcatgc gtcagggcga gatggtggcc
     2041 gatcgaccga cgatcgacac cagccccgag gagctggccg agctgatggt cggccgcaag
     2101 gtcctgttgc agctcgacaa gtcggcgtcg cggcccggcg aggtgctgct tcgcgccgag
     2161 cacctgaccc tcatcgacga tcgcggcgtg cggctgctcg acgatgtcgg gctggaactg
     2221 cgcgccggcg agatcgtcgg catcgccggc gtgtcgggca acggccagag cgaacttttg
     2281 cagatcctgt cgggcatccg tgcgccgacc agcggcaggc tgacggtatg cggccgggcg
     2341 atcgatgcga gccagccgtg cgatcccgcc gagatgcgca atttgcggct ggcgcacgtg
     2401 ccggaggacc gcctgcgcca gggcatggtg gcggccttcc aggcggcgga aaccgcgatc
     2461 ctgggctacc aggagaaacc gccgtactgc cgccactacc tgctggacgg accggcagtc
     2521 ggcgcccatt gcgccgctct catggagcgc ttcgacgtgc ggccgcgcgc gcccggcctg
     2581 cgctcgtcga gcttctcggg cggcaaccag cagaagctcg tgctggcgcg cgagatggcg
     2641 cgccaaccca aggtgctgct ggtcggccag ccgacgcgcg gcgtcgacat cggcgccatc
     2701 gagttcatcc atcgcgaagt ggtgaagagc cgcgaccagg gttgcgccgt gctggtggtg
     2761 tcggtcgagc tcgaggagat cctgtcgctc gccgaccgca tcctggtgat gttcgccggc
     2821 cgcatcatgg gcgaggtgcc cgcggggcgc gccgacgaac ggacgctggg cctgatgatg
     2881 gcgggggcaa aggcgtgagg gcacagcgtc ggccgctgcc tgtctgggcg gaaatcgcgg
     2941 tgctgccgct gatcaacatc gcgctcgcct tcgtcacggt cggcatcatc gttcgcatca
     3001 tcggcgtcga tccattgcat gccttgcg
//
LOCUS       DASWGA010000376         8537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1428667, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000376 DASWGA010000000
VERSION     DASWGA010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8537
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1428667"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..929)
                     /locus_tag="VF991_09000"
     CDS             complement(<1..929)
                     /locus_tag="VF991_09000"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEX9556618.1"
                     /translation="MRVPWRRLTWLLVAAVPIAAIVGVVWIGTRDLSRYQARLTEQIR
                     KVTGRELAAKVPLAVKLGSQPAMVAEGVTLSNAPWGSRPDLARVRKLTLFIDPVALFL
                     GEIKIGRLLIEGADILVEQNDVGDTNLDMLPPPDGSGPHAGENRSLRLRTSAAFPWID
                     TIEVRDSVLTIAQGAGRPPVVLEVPTATFRSPAPGQPLQIEGRFAAPQAAPLVLTGTA
                     GSFDGWMRALPGNIDLQGSFGGGKIAIKGGVGVKGTTVQINAEGPDISAFGPYIRLPV
                     PAGGPYVLAAKAGTQRSAFKVDVTTLKVGSSELT"
     gene            complement(946..1941)
                     /locus_tag="VF991_09005"
     CDS             complement(946..1941)
                     /locus_tag="VF991_09005"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX9556619.1"
                     /translation="MSVSPAPGMARGQVQSRAVSEQEAGLRLDRWFQRHFPELSHGAL
                     QKLLRTGQVRIDGRRAEGKDRVEPGQTIRLPPGVMASPPPKPREIPTVSDHDAAEIRR
                     LVIHRDDHVIVLNKPPGLAVQGGTGTERHVDGMLDALRFGFEERPRLVHRLDKDTSGV
                     LLIARTGQAAKHLGSSFRDRETEKLYWAVVVGVPTKARGAIDLPLAKRPGARDRELMQ
                     VDRDEGQKALTHFQVLDRAGKRAALLALWPRTGRTHQLRVHCAAIGCPILGDGKYGGE
                     EALLAPVADARRLHLHARRLTLPHPSGKGELKVEAEAPPHFRRTVEAFGFSFGGD"
     gene            1977..2906
                     /locus_tag="VF991_09010"
     CDS             1977..2906
                     /locus_tag="VF991_09010"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9556620.1"
                     /translation="MESLSFDTLTFDHPAGCRPARLTAQLWLPEQTERPSPCMVLLSS
                     SAGVQRHREHYYAQALNEAGTAALIVDSFTGRGVRRTVADQSLVSAAQMEGDAFAALA
                     VLRADQRIDPERIGIMGVSKGGVATLNAAIAVRQRWRNGFPHLFDLHVAICPGATAQH
                     RDATTHGRPMFLMLAARDDYTPAPLAIEYAERMRAAGNDRIKVKVYGSAHHGWESIGP
                     VFDIRDAENWSRCRNFIEDDGSHFVPAAGRAMAEPEFQAWARQHCVTKGARAGGGTPE
                     LKRRATADLLAFLADHDFAPQWTNRLLAASLSA"
     gene            2903..4396
                     /locus_tag="VF991_09015"
     CDS             2903..4396
                     /locus_tag="VF991_09015"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX9556621.1"
                     /translation="MILPRFLIFVLGFVVPVVGALPCLANETLWVGSGIARARAEALL
                     NAIRGASDHGLEPAWYGVREVEKALATGTDPAATETLLTTAFVAYASDVSTGRVRANR
                     VDKDIDIQQRKVERTDLIKAAAGAADFSAYLADLAPKGDYPVLQKALATWRDKRSTAG
                     FTSLPDGIALKPGMIDPRVPALRKRLAELDLAVAEPGAVADLYDEPLAVVVKAYQETK
                     GLTVDGVIGPKTTQSLNTTIDERIDQIVANLERRRWLPENLGSRYVLVNAGDYSMIFV
                     DQDKLAFQSLVIVGTPKDPTPEIQSVMRGFQTNPYWTVPQSISGEEYLPQLRRNANAL
                     AAAGFRIFENWSDDTELDPATVDWNAIHPKAFPYRLRQEPGAGNALGYIFFPFANGYG
                     IYMHDTANRWLFTEGSRNFSHGCIRLQNPLDFAEKVFNGRGGFSKERVRQVIDASQQA
                     HYTFPDPVTLYVTYRTVSAASDGTVVFRDDVYGRDRRVVREMGKPRS"
     gene            4421..6016
                     /locus_tag="VF991_09020"
     CDS             4421..6016
                     /locus_tag="VF991_09020"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX9556622.1"
                     /translation="MQDVAVLIVGGGPVGLTASILLSQAGVRSLLVERHPGTAVHPKA
                     RGINARSMEMYRQCGVEAAIRQAGLPPERAGFIVWAHTLAGEEIERRVPWRSGPQSTA
                     VSPVRNCLCAQDDLEPVLRRFAEQQPGGELRFSTEVTACEQDDAAVTATLVDRASGRQ
                     RQVRARYVIAADGAQSSVRQQLGVRMLGEEDVYDSVNILFNADLRPWTLDRPAALYFI
                     EHPKMRATFLTINGIDRWGFLVNSLAAYGYKASDFTAERSAELVRIAAGVADLDVKIL
                     GIAPWTASARVAERYRLGRIFLAGDAAHEMPPTGGFGMNTGVQDVHNLAWKLAAVIRG
                     AASERLLDTYHDERQPLGRAITQQSLANAISMGRLNRTTERAGARPEYLNEQGMIFGA
                     AYESSAVVPDGTAPPVVANPVTDYVPSARPGGRAPHAWLARNGERISTVDLLGNGFVL
                     LTTRAGQAWREAAQRLSIGAFSIGNSELTDPDGQWTEAYGLDATGAVLVRPDGYVGWR
                     NRAMTADPSASLAEAMATIMGRA"
     gene            complement(6137..7429)
                     /locus_tag="VF991_09025"
     CDS             complement(6137..7429)
                     /locus_tag="VF991_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEX9556623.1"
                     /translation="MPAELFASLAPTPLAARLRPKSLSEILGQDHLLGPEGPIGRMLA
                     NRKLGSLILWGPPGCGKTTIARLLAEDTDLHFEPLSAVFSGVADLRRIFEAARQRRKD
                     GKGTLLFVDEIHRFNRAQQDGFLPYVEDGTVTLIGATTENPSFELNGALLSRCQVLVL
                     RRLDEAALSALLARVEQALAKKLPIDEEGRQALFAMADGDGRYLITLAEQLAGLKEKG
                     PVPPERLAALLQKRAPLYDKAQEAHYNLISALHKSLRGSDVDAALYWFARMLDGGEDP
                     KYIARRLVRFAVEDVGMADPNALTQTLAAWDTYDRLGSPEGELAIAQAVIYLGTAPKS
                     NSGYTAFSAAKQAAKTHGSLVPPMHILNAPTKLMKDIGYGKGYEYDHNAEDGFSGQNY
                     FPDGMAREEFYQPVERGFEREILKRLEYWKKLREKKRS"
     gene            complement(7446..>8537)
                     /locus_tag="VF991_09030"
     CDS             complement(7446..>8537)
                     /locus_tag="VF991_09030"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX9556624.1"
                     /translation="GLIVTNAHVVKGADEIRVVLADRREFEAKLATQDERYDLALLRI
                     DTSGEKFPFLEMRDSDSIEVGDIVLAIGNPFGLNQTVTSGIISALARSAGGVNDSSFF
                     IQTDAAINPGNSGGALVSLDGRLIGINTAIYSQNGGSVGIGFATPSNIVTRMVSIGEH
                     GGRIVRPWLGMNMQRVTADLATGLNLQRPAGLVVKEVFPDGPGAHAGLKRNDVIIALK
                     DQPIDDEASLRFRLATLQVDATVPVKIIRGGKEFVFEMKLAPPPETPPRDQAVLDGRQ
                     PLSGAAVANMSPAVADELGLVEWRPGVIVMEIKPGSFAGRFVRPGDMILGVNGQDVKN
                     VADLKKHIAAGVASVSIGREGMVSTVQFR"
BASE COUNT         1382 a         2918 c         2840 g         1397 t
ORIGIN      
        1 gtgagctcgc tcgagccgac cttcagggtc gtcacgtcga ccttgaaggc gctgcgctgg
       61 gtgccggcct tggcggccaa tacatagggc ccgccggccg gcaccggcag gcggatatag
      121 ggaccgaagg ccgagatgtc cggtccctcc gcgttgatct ggacagtggt gcccttgacg
      181 ccgacgccgc ccttgatggc gatcttgccg ccgccgaagc tcccctgcag gtcgatgttg
      241 ccgggcaggg ctctcatcca gccatcgaaa gagccggccg tgccggtgag gacgagcggt
      301 gcggcctgcg gggcggcgaa gcgcccctcg atttgcaacg gctggccagg tgccggcgaa
      361 cggaacgtgg cggtcggcac ttccagcacc accggcggac gtcctgctcc ctgggcgatg
      421 gtcaggaccg agtcgcgcac ctcgatggtg tcgatccagg ggaacgccgc cgacgtgcgt
      481 agcctgagcg agcggttctc ccccgcatgc ggtcccgagc cgtcgggcgg cggcagcatg
      541 tcgaggttgg tgtcgccgac atcgttctgc tcgaccagga tgtcggcgcc ttcgatcagg
      601 agccggccga tcttgatctc gccgagaaac agcgcgaccg gatcgatgaa cagggtgagc
      661 ttgcgcaccc gggcgaggtc gggacgcgat ccccacggcg cattcgacag cgtgacgcct
      721 tcggccacca tcgcgggctg gctgccgagc ttcaccgcga gcggcacctt tgccgccagt
      781 tcgcggccgg tcaccttgcg gatctgttcg gtcagtcggg cctgatagcg ggagagatcg
      841 cgcgtgccga tccaaacgac gccgacgatc gctgcaatcg ggaccgccgc tacgagaagc
      901 caggtcagcc gcctccaagg aacgcgcata ctgcccgatt ctcgctcaat cgccgccgaa
      961 cgagaagccg aatgcttcga cggtacggcg gaagtgaggc ggtgcttccg cctcgacctt
     1021 caattccccc ttgccggagg gatgcggcag ggtgagccgt cgggcgtgaa ggtgcaggcg
     1081 tcgggcgtcg gccacgggcg ccagcagggc ttcctcaccg ccatacttgc cgtcgcccag
     1141 gatgggacag ccgatcgccg cgcaatgcac gcgcaactgg tgcgtcctgc cggtgcgcgg
     1201 ccacagcgcc agcagcgcgg cgcgcttgcc ggcccggtcg aggacttgaa aatgggtcaa
     1261 cgccttctgg ccctcgtcgc gatcgacttg catcagctcg cggtcgcgtg cgccaggccg
     1321 cttggccagc ggcagatcga tggcgccgcg agccttggtt ggcacgccga ccacgaccgc
     1381 ccaataaagc ttctcggtct cccggtcgcg aaaggaggag cccaggtgtt tggccgcttg
     1441 cccggtgcgg gcaatcagca gaacgccgga ggtgtcctta tccagacgat gaaccaatcg
     1501 cggccgctcc tcgaagccga agcgcagcgc atcgagcatg ccgtcgacgt gccgctccgt
     1561 gcccgtccct ccttgtacag cgagcccggg cggtttgttc aggacgatga cgtggtcgtc
     1621 cctgtggatg accagtcggc ggatttccgc ggcatcgtgg tccgacaccg tcgggatctc
     1681 gcgcggcttg ggtggcggcg aagccatgac cccgggcggc agccgaatgg tctggccggg
     1741 ctcgacgcgg tccttgccct cggcgcggcg gccgtcgatt cgcacttgcc ccgtgcgcaa
     1801 aagcttttgc aaagccccgt ggctcagctc gggaaaatgc cgctggaacc agcgatcgag
     1861 ccgcagcccg gcctcttgtt cggagaccgc gcgactctgg acctggccgc gggccatgcc
     1921 aggggcgggg ctgacgctca tggcgcgcaa cctaagggac aagctaaaca gggtccatgg
     1981 aatcgctgtc gttcgacacg ctgacgttcg accacccggc gggctgccgg ccggcgcggc
     2041 tcaccgcgca gctctggctg ccggagcaga ctgaacggcc ctcgccgtgc atggtgctcc
     2101 tcagtagcag tgccggcgtt cagcgccatc gcgagcacta ttacgcccag gccctgaacg
     2161 aggccggcac ggcggcgctg atcgtcgaca gtttcaccgg ccgcggcgtg cgccgcacgg
     2221 tggcggacca aagcctggtt tcggcggccc aaatggaagg cgacgccttc gcagcgctgg
     2281 cggtcttgcg cgccgaccag cgcatcgatc ccgagcggat cggcatcatg ggcgtctcga
     2341 aaggcggcgt ggcgacgctc aacgccgcga tcgcggtccg tcagcgctgg cgcaacggct
     2401 ttccccacct cttcgatctg cacgtcgcaa tctgcccggg cgcgaccgcc cagcatcgcg
     2461 acgccacgac gcacggccgg ccgatgttcc tcatgctggc ggcgcgcgac gactacacgc
     2521 cggcgccgct cgccatcgaa tatgccgaac gcatgcgcgc ggccggcaac gatcgcatca
     2581 aggtcaaggt ctacggcagc gcccaccacg gttgggaatc gatcgggccg gtgttcgaca
     2641 tcagggacgc cgagaattgg tcgcgctgcc gaaatttcat agaggatgac ggaagtcact
     2701 tcgttcccgc cgctggacgg gccatggcgg agcccgaatt ccaggcttgg gcgcggcagc
     2761 attgcgtcac caagggcgcc cgggcggggg gcggcacgcc cgagctgaaa cgacgggcga
     2821 cagccgattt gctggctttt ctggcagacc acgacttcgc gcctcaatgg acgaatcggt
     2881 tgttggcagc tagtcttagc gcgtgatcct ccctcgcttt ctcatctttg ttctgggctt
     2941 tgtcgtcccc gtcgtcgggg cacttccctg ccttgccaat gagactctgt gggtcggatc
     3001 gggcatcgcc agggcccgcg ccgaggcctt gctgaatgcc attcgcggcg cttccgacca
     3061 tgggctggaa cccgcctggt acggcgtccg tgaggtcgag aaggccttgg caacgggcac
     3121 cgatccggcg gcgaccgaga ccctcctcac gactgctttc gtcgcctacg ccagcgacgt
     3181 gtcgaccgga cgggtgcgcg ccaatcgcgt cgacaaggac atcgacatcc agcagcgcaa
     3241 ggtcgagcgc accgacttga tcaaggccgc ggccggggct gccgatttct ccgcctacct
     3301 cgccgacttg gctcccaagg gcgactatcc cgtgctgcag aaggcgctcg ccacctggcg
     3361 cgacaagcgc agcacggccg gcttcacttc cctgcccgac ggcatcgctt tgaagcccgg
     3421 catgatcgat ccgcgcgtgc cggccttgcg caagcgcctg gccgaactcg acctcgccgt
     3481 tgccgagccc ggcgccgtgg ccgatctcta cgacgagccg ctggctgtcg tggtcaaggc
     3541 ctaccaggag accaaggggc tcacggtcga cggtgtcatc ggccccaaga cgacgcagtc
     3601 gctcaacacc acgatcgacg agcgcatcga ccagatcgtc gccaatctcg agcgccggcg
     3661 ctggctgccg gaaaacctcg gcagccgcta tgtgctggtc aatgccggcg actattcgat
     3721 gatcttcgtc gaccaggaca agcttgcgtt ccagagcctg gtaattgtcg gcacgcccaa
     3781 ggacccgacg cccgagatcc agtcggtcat gcgcggcttc cagaccaacc cttactggac
     3841 ggtgccgcaa tcgatctccg gcgaggaata cctgccccag ctgcgccgca acgccaacgc
     3901 gctggcggcg gccggcttca ggatcttcga gaattggagc gacgacaccg agctcgatcc
     3961 cgcgacggtc gactggaacg cgatccatcc caaggcgttt ccctaccgcc tccgccagga
     4021 gcccggcgcc ggcaatgccc tgggctacat cttcttcccg ttcgccaatg gatacgggat
     4081 ctatatgcac gacacggcca atcgctggct gttcaccgaa ggcagccgca atttcagcca
     4141 tggctgcatc cgcctgcaga acccgctcga cttcgccgaa aaggtcttca acggccgcgg
     4201 cggcttcagc aaggaacgcg tgcgccaggt gatcgacgcc agccagcagg cgcattacac
     4261 cttccccgac ccggtgacgc tctacgtcac ctaccgcacg gtgagcgccg ccagcgacgg
     4321 caccgttgtc ttccgcgacg acgtctatgg ccgcgacagg cgagtcgtgc gcgaaatggg
     4381 caagccgagg agctagactg cccgtcgagc cggaggagcc atgcaagacg ttgcggtcct
     4441 gattgtcggc ggcggcccgg tcggcttgac cgcttcgatc ctgttgtccc aagcgggcgt
     4501 ccgctcgctg ctcgtcgagc gacaccccgg cacggccgtt catcccaagg cgcgcggcat
     4561 caacgcgcgc agcatggaaa tgtaccgcca atgcggcgtc gaggcggcca tccgccaggc
     4621 cggcctgccg ccggaacgcg ccggcttcat cgtctgggcg catacgctgg ccggtgagga
     4681 gatcgagcgc cgggtgccct ggcgctcggg tccgcagagc accgccgtca gtccggtgcg
     4741 caactgcctg tgtgcccagg acgacctcga gccggtgctg cggcgctttg ccgagcagca
     4801 gccgggtggc gagctccgct tcagcaccga ggtcacggcc tgcgagcagg acgatgcggc
     4861 tgtcacagcg acgctcgtgg atcgcgcgag cggcaggcaa aggcaggtgc gggcgcgata
     4921 cgtcatcgcc gccgatggtg cacaaagcag cgtccgccaa cagctcggcg tgcgcatgct
     4981 gggcgaggaa gatgtctacg acagcgtcaa catcctcttc aatgccgatc tccggccatg
     5041 gacccttgat cgaccggccg cgctctactt catcgagcat cccaagatgc gggccacgtt
     5101 cctcaccatc aatggcatcg accgctgggg tttcctggtc aacagtctcg cggcctacgg
     5161 ctacaaggcg agcgacttca ccgcggagcg ttcggcagaa ctcgtgcgca tagcggcggg
     5221 cgttgccgac ctcgatgtca agatcctcgg catcgcgccc tggacggcct cggcccgcgt
     5281 ggccgagcgc tatcggctgg gccgcatctt cctggcgggc gatgccgcgc acgaaatgcc
     5341 gccgaccggc gggttcggca tgaacaccgg cgttcaggac gtgcataacc tcgcctggaa
     5401 gcttgccgcc gtgatccgtg gcgcggcgag cgaacgcctg ctcgatactt atcacgacga
     5461 acgccagccg ctcggccggg ccatcaccca gcaaagcctc gccaacgcca tttccatggg
     5521 ccgcttgaac cgcacgacag agagggcagg tgcccggccc gaatacctca acgagcaggg
     5581 catgatcttc ggcgccgcct acgagtcgag cgccgtcgtg cccgatggga cggcgccccc
     5641 cgtcgtcgcc aatccggtca ccgactatgt gccgtcggcg cgccccggcg gccgcgcgcc
     5701 gcatgcctgg ctcgcgcgca acggcgagcg catctccacc gtcgaccttt taggcaacgg
     5761 cttcgtcctg ctgacgaccc gagccggcca ggcatggcgc gaagcggcgc aacgcctgag
     5821 tatcggcgcc ttcagcatcg gcaatagcga gctcaccgat cccgacggac aatggaccga
     5881 ggcctacggt ctcgatgcga cgggcgccgt gctcgttcgc cccgacggct atgtcggctg
     5941 gcgcaaccgc gccatgacgg ccgatccctc cgccagcctc gccgaggcga tggcgacgat
     6001 catgggccgc gcgtaatgcg cctcatcgtc tttgctggga gcgcgccact ctgtggcgcg
     6061 tcttcgcttg ctctcttggg ccgcgagcgt ctcgctcgct catgaccatg agcgccacgg
     6121 agtggcgcgc tcccagctat gaacgctttt tctcgcgcag cttcttccag tattccaggc
     6181 gcttcaggat ctcgcgctcg aagccgcgtt cgaccggctg atagaattcc tcgcgcgcca
     6241 tgccgtcggg gaaatagttc tgccctgaga agccgtcttc ggcattgtgg tcgtattcgt
     6301 agcccttgcc gtagccgatg tccttcatga gcttggtcgg cgcattgagg atgtgcatcg
     6361 gcggcacgag cgagccatgc gtcttggccg cctgcttggc ggcactgaag gccgtatagc
     6421 ccgaattcga tttcggcgcg gtgccgagat agatcacggc ttgcgctatg gcgagctcgc
     6481 cctcgggcga gcccagccgg tcgtaggtgt cccaggctgc gagtgtctgg gtgagcgcat
     6541 tgggatcggc catgccgaca tcctcgacgg cgaagcgcac gagacggcga gcgatgtatt
     6601 tcgggtcctc gccgccgtcg agcatgcgcg cgaaccagta gagcgccgcg tcgacatcgg
     6661 agccgcgcag cgacttgtgc agcgcgctga tcaggttgta gtgcgcttcc tgcgccttgt
     6721 cgtagagcgg cgcgcgcttc tgcaggagcg ccgccagccg ctcgggcggc acggggcctt
     6781 tttccttcag gccggcgagt tgctcggcaa gcgtgatgag atagcggcca tcgccatcgg
     6841 ccatggcgaa cagcgcctgc cttccctcct cgtcgatcgg cagcttcttg gccaacgcct
     6901 gctcgacccg cgccagcaag gcggacagcg ccgcctcgtc gaggcggcgc aacaccagca
     6961 cctggcagcg cgacagcagc gcgccgttca actcaaacga cgggttctcc gtcgtcgcgc
     7021 cgatcaaggt gaccgtgccg tcctcgacgt aaggcagaaa accgtcctgc tgggcgcggt
     7081 tgaagcggtg gatctcgtcg acgaacagca aggtgccctt gccgtccttg cggcgctggc
     7141 gggccgcctc gaagatgcgg cgcaggtcgg cgacgccgga gaacaccgcc gacaacggct
     7201 cgaaatgcag gtcggtgtcc tcggcgagca ggcgggcgat cgtggtcttg ccgcagcccg
     7261 gcggtcccca caggatcagc gagccgagct tgcggttggc cagcatgcgg ccgatcggcc
     7321 cttcgggccc gagcaggtga tcctggccca gaatctcgct caacgacttc ggccgcaggc
     7381 gcgcggcgag cggcgtcggg gcaagcgagg cgaagagttc agccggcacg cgacaccgtc
     7441 ccggctcagc ggaactggac agtcgacacc atgccctcgc ggccgatgct gacgctggcc
     7501 acgccggcgg cgatgtgctt cttgaggtcg gcgacgttct tcacgtcctg gccgttgacg
     7561 cccaggatca tgtcgccggg ccgcacgaat cggccggcaa aggagccggg cttgatctcc
     7621 atgacgatca cgcccggccg ccattcgacc aggccgagct cgtcggcgac ggcgggcgac
     7681 atgttggcga cggcggcgcc gctcagcggc tggcggccgt cgagcaccgc ctgatcgcgc
     7741 ggcggagtct ccggcggcgg ggcgagcttc atctcgaaga cgaactcctt gccgccgcgg
     7801 atgatcttga ccggcacggt cgcatcgacc tgcaaggtgg ccagccggaa gcgcaggctc
     7861 gcctcgtcgt cgatcggctg gtccttcagg gcaatgatca cgtcgttgcg cttcagcccg
     7921 gcgtgcgccc cgggaccgtc ggggaacact tccttgacga ccaggccggc cggccgctgc
     7981 aggttgaggc cggtggcaag gtcggcggtc acccgctgca tgttcatgcc gagccacggc
     8041 cgcacgatgc gcccgccatg ctcgccgatc gagaccatgc gggtgacgat gttcgacggc
     8101 gtggcgaagc cgatgccgac cgatccgccg ttctgcgaat agatcgccgt gttgatgccg
     8161 atcagccggc cgtcgaggct gaccagcgca ccgccggaat tgccgggatt gatcgcggca
     8221 tcggtctgga tgaagaagct cgaatcgttg acgccgccgg cgctgcgcgc cagggccgag
     8281 atgatgccgc tggtgacggt ctggttgagg ccgaacggat tgccgatggc gagcacgatg
     8341 tcgccgacct cgatcgagtc cgaatcgcgc atctccagga aggggaactt ctcgccgctg
     8401 gtatcgatgc gcagcaaggc gaggtcatag cgctcgtcct gggtggcgag cttggcctcg
     8461 aactcgcggc ggtcggccag cacgacgcgg atctcgtcgg cacccttcac cacatgggca
     8521 ttggtgacga tcagtcc
//
LOCUS       DASWGA010000377         8708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_801126, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000377 DASWGA010000000
VERSION     DASWGA010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8708
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_801126"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1260)
                     /locus_tag="VF991_09035"
     CDS             complement(<1..1260)
                     /locus_tag="VF991_09035"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEX9556625.1"
                     /translation="MNRFSGLNLLGPYLRPYRGRAALALLSLLVAAGTVLAFGACLRA
                     LIDRGFAEGRPDVLNYALASLLAVALVLAIASGARFYLVSWLGERVVGDLRRDLFAHV
                     IRLGPAWFEVKRSGDVMSRISADAQLIEQVIGSSASIALRNTLMCVGGVIMLVITNPK
                     LALLVLAVVPLVVAPIIVFGRKVRALSREAQARMADMVSEGGETLDAVRTVQAFAQED
                     RAAMRFGEATERTFAAARRRIARRAIMTTLVIFIVFAAVGFLLWMGGHDVISGRISAG
                     DLTAFVFYAVLVATSGGAISETIGDLQRAAGAAERLAELGAEPPAIVEAVHPKLLPKP
                     VQGSVRFEEVSFRYPTRPDSLALDRFELGVAPGETVAIVGPSGAGKTTVFNLLLRFYD
                     PESGTIRIDGVDIRDLSFASLRGTLAIV"
     gene            complement(1257..1574)
                     /gene="cyaY"
                     /locus_tag="VF991_09040"
     CDS             complement(1257..1574)
                     /gene="cyaY"
                     /locus_tag="VF991_09040"
                     /inference="COORDINATES: protein motif:HMM:NF013643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HEX9556626.1"
                     /translation="MTDSSFESLADSLLAALEEGIGAHGDAELQGGILTVEGDARSGG
                     GTWVINKHAPTKQIWLSSPQSGARHYAFDAGSGQWRDTRGGVDLLAHLSAELGVPLAW
                     RRQ"
     gene            1716..1919
                     /gene="rpmE"
                     /locus_tag="VF991_09045"
                     /pseudo
     CDS             1716..1919
                     /gene="rpmE"
                     /locus_tag="VF991_09045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005774581.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
     gene            2081..4129
                     /locus_tag="VF991_09050"
     CDS             2081..4129
                     /locus_tag="VF991_09050"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX9556627.1"
                     /translation="MKSVRVVCAHDCPDMCSLIAHVEDGKVVRIQGDPDHPYTAGFAC
                     GKVNRDADLVNSPERVATPLKRIGPKGSGQFKPIGWDEALDEIAAKWKAIIRQSGPLA
                     LLGYAYSAHQGLMNRGLVNGLFHALGASRLQAGTVCDTCCETAWDMTLGPVGGADPES
                     VVHSDLVISWGADLAATNVHFWALAEEQRKKRGVPIVVIDPRRTRSAKVADLYLPIRI
                     GTDAALALGIMHILVRDQRADRDYIARHTLGFDKVEREILPKFTPARTAEITGLAVAD
                     IEKLAAMYGTAKAALIRLGEGMTRLTHGGQALRTVALLPGVSGHYAVKGGGALLLTAA
                     SCDLNYNAVRKPSGPATARLVNHLRLGEELLHMKDPPIRALYISANNPAVTCPEVQKV
                     RRGLAREDLFTVVHDPFMTDTARFADILLPAATYLETDDLYRAYGAYWMQWGRQAAAP
                     QGEARSNFDVAQALAQRMGLTDEIFTLSPQDAARELFKGATGPAAKADPARLFAGESI
                     NIAHDWNGQPFKTPSGKLEFYSEQLAGQGVPPMPDWNEDPIEMAEAAKWPLRLLTAPG
                     YFQAHTAYSGVSFLRQREGKPFCVLNPEDAGQRGLKQGDEVRLFNDRGAIGRMLQVSD
                     DIQPGVVLVPGQRPTGETVSGTINMLCSDRYTDMGEGATYQSTWLDVGRWPTAQQAAD
                     "
     gene            complement(4450..4761)
                     /locus_tag="VF991_09055"
     CDS             complement(4450..4761)
                     /locus_tag="VF991_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HEX9556628.1"
                     /translation="MVDLHAIHDGLVVTAFWEAKPAEVDQVVDILKRFLPQAQREPGV
                     KAFQIHQSLTEPEKFFFYEVFRDEAAFADHQQTDHFKTLIAGQALAKLAKRERTQHKF
                     V"
     gene            5147..5854
                     /locus_tag="VF991_09060"
     CDS             5147..5854
                     /locus_tag="VF991_09060"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX9556629.1"
                     /translation="MTLAALASALLSAACVTTEPVSPAAAGPATAPEPAPSAYVSMLR
                     SQGVETAIPSRGKFIVVNIPSFELIALQDGVPVLRSRVVVGRPAAPTPELLSSMFAIQ
                     FNPAWTPTPLMIRNEGLHYMPPGPQNPLGRMMFDLDNDESIYLHDTNEKALFNRAQRA
                     LSHGCVRVEQARALAAWSLGVSEEEIDAMISRGTTYSVPLPEIIPVSLVYYTRFADEH
                     GQVASHPNIYADRLAEK"
     gene            5889..6848
                     /locus_tag="VF991_09065"
     CDS             5889..6848
                     /locus_tag="VF991_09065"
                     /inference="COORDINATES: protein motif:HMM:NF013335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HEX9556630.1"
                     /translation="MAPNRLILDTDGGVDDAQALLLLIAAGRAPDAITTVFGNVSLDA
                     ATQNVLAVLAVAGAVIPVHPGAEQPLAQERIDARHVHGEDGLGGAPRPDRTADIAGSD
                     AVGFLVTTLSDAAASADPVDLLMIGPLTNLALALQRAPRIAGGVGQLTIMGGTVFGRG
                     NVTPAAEFNIFSDPEAAAIVFAAGVETTVIPWEPCLAHSLSGAEIDRMFEPVADSDYK
                     AFVQALVEHERKRHIRNGQGDCLFFIDPLAAAVVVETGIVTRSIRASLVVALEPGITR
                     GMTVVDPSGRLGTPMVTLVEEARLDRLAAFFAASVAYSPRRIR"
     gene            6971..7741
                     /locus_tag="VF991_09070"
     CDS             6971..7741
                     /locus_tag="VF991_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018445676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX9556631.1"
                     /translation="MTKPVVGVIGNAHVVNDRHNVQLVGQSNLRAVADVAGALPLMFA
                     GTPDITDIDALLGAVDGILLTGARANVHPACFGVEPDSRHEPYDHDRDAMALALIEAC
                     VARGVPLFGICRGFQEMNVAFGGSLHPEIRDLPGRMNHRMPRLDNGEIHPDPHVVFAD
                     RHEVRLVADGVFARLLGRESIRVNSLHGQGILEPGERIVVEGVAEDGTIEAIRIADAP
                     SFALGVQWHAEYDPQHNPINRALFKAFGAALLERRRTS"
     gene            7973..8140
                     /locus_tag="VF991_09075"
     CDS             7973..8140
                     /locus_tag="VF991_09075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556632.1"
                     /translation="MKTLLIIGAIAIIAVGVPAFGYVIRWIIRRPLTPEQEKQEELLR
                     ERRRDARYFWR"
     gene            complement(8235..8498)
                     /locus_tag="VF991_09080"
     CDS             complement(8235..8498)
                     /locus_tag="VF991_09080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012047405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1488 domain-containing protein"
                     /protein_id="HEX9556633.1"
                     /translation="MPLGFPNESRFYDAAVHAVRFSGYDGAMEAPFFVDERALKQIQP
                     DMPSDEAGLLQAFDLNRERIYATAARVYERGRKGSYDLLPEDF"
BASE COUNT         1503 a         2964 c         2835 g         1406 t
ORIGIN      
        1 cacgatggcg agcgtgccgc gcaagctggc gaagctgagg tcacggatat cgacgccatc
       61 gatccggatg gttcccgact cgggatcgta gaagcgcagc agcaggttga agacggtggt
      121 cttgcccgcg cctgacggcc cgacgatggc gaccgtctcg cccggcgcga cgccgagctc
      181 gaagcggtcg agggccagcg aatcgggccg cgtcggatag cggaacgaga cctcctcgaa
      241 gcgcacgctg ccctgcaccg gtttgggcag cagcttggga tggacggctt cgacgatcgc
      301 cggcggctcg gccccgagct cggccaggcg ttcggcggcg cccgcggcgc gctgcagatc
      361 gccgatggtc tcgctgatgg cgccgcccga ggtggcgacc agcacggcgt agaagacgaa
      421 ggccgtgagg tcgccggcgc tgatgcgtcc gctgatgacg tcgtggccgc ccatccacag
      481 caggaaaccg acggcggcga agacaatgaa gatcaccagc gtcgtcatga tggcgcgccg
      541 ggcgatgcgc cggcgggcgg cggcgaaagt gcgctcggtt gcctcgccga aacgcatcgc
      601 ggcgcgatcc tcctgggcga acgcctggac ggtgcgcacc gcgtcgagtg tctcgccgcc
      661 ttccgacacc atgtcggcca tgcgcgcctg cgcctcgcgc gacagcgcgc ggaccttgcg
      721 gccgaacacg atgatgggcg ccacgacgag cggcacgacc gccagcacca gcaacgcgag
      781 cttgggattg gtaatcacca gcatgatcac gccgcctacg cacatcagcg tgttgcgcag
      841 cgcaatcgag gccgacgagc cgatcacctg ctcgatgagc tgggcgtcgg ccgagatgcg
      901 gctcatgacg tcgcccgagc gcttgacctc gaaccatgcc ggaccgagcc ggatcacgtg
      961 cgcgaacagg tcgcggcgca ggtcgccgac cacgcgctcg cccagccacg agaccaggta
     1021 gaaacgcgcg cccgaggcaa tcgccagcac cagcgccacg gcgagcagcg aggccagcgc
     1081 atagttcagg acatcgggcc ggccttcggc gaagccgcga tcgatcaggg cgcgcaggca
     1141 ggcgccgaag gccagcaccg tgccggccgc caccagcagc gacagcagcg ccagcgccgc
     1201 ccggccgcga tagggcctga ggtagggacc gagcaggttg aggccgctga accggttcat
     1261 tgccgccgcc acgccagcgg cacgcccaac tcggccgaca gatgcgccaa aaggtcgacc
     1321 ccgccccggg tgtcccgcca ctgccccgag ccggcgtcga aggcatagtg ccgcgccccg
     1381 ctttgcggcg aactcagcca gatctgcttg gtgggtgcat gtttgttgat gacccaggtg
     1441 ccgccaccgg atctggcgtc gccctcgacg gtcaggatgc cgccctgcag ctcggcatcg
     1501 ccatgcgcgc cgatcccctc ctcgagggcg gcgagcaggc tgtcggccag gctttcgaac
     1561 gacgaatcgg tcatgagtcc ggccggtcta caggcccgtt cgaccgccga caacccggga
     1621 tatggcgggc ttgtcgccgc gcgacggggc ttgtataccc ccggccctgt tgcgccggcc
     1681 ggtcggaaat cggtcctgaa gcgctggaga gagacatgaa agagaagatc caccccgact
     1741 accacaagat caccgtggtg atgaccgacg gcacgtcctt cgagacgaag tcgacctggg
     1801 gcaaggaagg cgccagcctg cgcctggaca tcgatcccaa gacccacccg gcgtggaccg
     1861 gcgtgcgcca gagcgtcgat cgcggcggcc gcgtgcagcg cttcaaggac cgcttcggca
     1921 tgaccggcac ctcgggtgca ggcgttggcg ccggcaccaa gtcggccggc gccaagccgg
     1981 aaccgacccc ggctaagggc gcggccaaga agaagtaagg ccggccttct ccgacgcctc
     2041 tgttacactc gcgccgcgac cttttcctgg aggcgatggc gtgaagtccg ttcgagtcgt
     2101 ctgtgcgcat gactgccccg acatgtgttc gctcatcgcc catgtcgagg acggcaaggt
     2161 cgtgcgcatc cagggcgacc ccgaccatcc ctacacggcg ggtttcgcct gcggaaaagt
     2221 gaaccgcgac gccgacctgg tgaactcgcc ggagcgcgtc gcgacaccgc tcaagcgcat
     2281 cggtcccaag ggctccggcc agttcaagcc gattggctgg gacgaggcgc tcgacgaaat
     2341 cgccgccaag tggaaggcga tcatccggca gagcggtccg ctggcgctcc ttggctacgc
     2401 ctactccgcc catcagggcc tgatgaatcg cggcctggtg aacggccttt tccatgcgct
     2461 gggcgcctcg cgcctgcagg ccggcacggt ctgcgacacc tgctgcgaga ccgcctggga
     2521 catgacgctc gggccggtcg gcggcgccga ccccgaatcg gtcgtgcact ccgacctggt
     2581 gatttcgtgg ggcgccgacc tcgccgccac caacgtgcac ttctgggcgc tcgccgagga
     2641 gcagaggaag aagcgcggcg tgccgatcgt ggtgatcgat ccgcgccgta cgcgcagcgc
     2701 caaggtggcg gacctctacc tgcccatcag gatcggcacc gatgcagccc ttgcactcgg
     2761 catcatgcac atcctggtgc gcgaccagcg cgccgaccgc gactacatcg cccgccacac
     2821 gctgggcttc gacaaggtcg agcgcgagat cctgcccaag ttcacgccgg cccgcacggc
     2881 cgagatcacg ggccttgccg tcgccgacat cgagaagctc gcagcgatgt acggcacggc
     2941 caaggccgcg ttgatccgcc ttggcgaagg catgacccgc ctcacccatg gcggccaggc
     3001 gctgcgcacg gtggccctgc tgccgggcgt gagcggccac tacgcggtga agggcggcgg
     3061 tgcgttgctg ctgaccgccg catcctgcga cctgaattac aacgccgtgc gcaagccgtc
     3121 gggtccggcg accgcgcgtc tggtcaatca cctgcggctg ggcgaagagc ttttgcacat
     3181 gaaggatccg ccgatccgcg ccctctacat ttcggccaac aatccggcgg tgacctgccc
     3241 cgaggtccaa aaggtgcgcc ggggtctggc gcgcgaggac ctgttcaccg tcgtgcacga
     3301 tcccttcatg accgacaccg cgcgcttcgc cgacatcctg ctgccggccg cgacctacct
     3361 cgagaccgac gacctctacc gcgcctacgg cgcctattgg atgcaatggg gccgacaggc
     3421 ggccgcgccg cagggcgagg cccgctccaa cttcgacgtc gctcaggcgc tggcgcagcg
     3481 catgggcctc acggacgaga tttttaccct gtcgccgcag gacgccgcgc gcgagttgtt
     3541 caagggcgcc acggggccgg cggccaaggc cgacccggcc aggctgtttg ccggcgagtc
     3601 catcaacatc gcgcacgatt ggaacggtca gccgttcaag acgccgtcgg gcaagctcga
     3661 attctattcc gagcagcttg ccgggcaggg cgtcccgccg atgccggact ggaacgagga
     3721 tccgatcgag atggccgaag ccgccaagtg gccgctgcgg ctcctgactg cgcccggcta
     3781 cttccaggcc cacaccgcct actccggcgt cagcttcctg cgccagcgcg agggcaagcc
     3841 gttctgcgtg ctcaaccccg aggatgccgg ccagcgcggc ctgaagcagg gcgacgaggt
     3901 gcggctgttc aacgaccgcg gcgcgatcgg ccggatgctg caggtaagcg acgacatcca
     3961 gcccggcgtc gtgctggtgc cgggccagcg cccgaccggg gagacggtgt cgggcaccat
     4021 caacatgctg tgctccgacc gctacaccga catgggcgaa ggcgcgacct accagagcac
     4081 ctggctcgat gtcgggcgct ggcccacggc tcagcaggcc gcggactagg gtctcgtccg
     4141 ggggtttccg cattttccgc aatttccgct aacgattttg actgcagcgg ccggccaccc
     4201 agctcgcttc gcggaacttt tgattggtta gcgtcctttc cgccggtcgt tttcgattcg
     4261 cacgaaggtg catgcggttg ctccgctttc tgaacggggc aaaagcataa gcgaaatctt
     4321 aagtgaaagc aaccactata tatagtatta cttcccgccc ctgccgaagc ggaataagtg
     4381 cgcaccatcg aggcggtaaa ggccgtttcc ggaggcgcgc cacttccgtg gcgcgcctcc
     4441 ggcaaatgcc tacacgaact tgtgctgcgt gcgctcgcgc ttggcgagct tggccagcgc
     4501 ctgtcccgca atcaacgtct tgaagtggtc ggtctgctga tggtcggcga atgccgcctc
     4561 gtcccggaag acctcgtaga agaagaactt ctcgggctcg gtcagcgact ggtggatctg
     4621 gaacgccttg acgcccggct cgcgctgagc ctgcggcagg aagcgtttca ggatgtcgac
     4681 cacctgatcg acttcggcgg gcttggcctc ccagaacgcc gtgacgacga gaccatcgtg
     4741 gatcgcatga agatcgacca tgtgcttctc cttggtgaac gatggccgga ccataggcga
     4801 gcaggtcgcg ccgtcgtttc ggcgccggtc gaaacgaccc tcgctcaatc cagccggatc
     4861 acgggctcgg gccaggcgac ggctcgcgcc gctccaaggg cggccgtatc catgtacacc
     4921 cgctcctcgg cgatccggcc gtcgcgcaga agatcgcgca cgaccgatct ggcggagttc
     4981 ggaccctaca accccgcggc gccgccttcg gaagagacgg ttccttcgca aaagcccttg
     5041 tttgcgggca ccggacgcca gatatgctga gaatggattt ggacgcggaa ccatctggag
     5101 gcctgcgatt cgacatgggg taaatggccg tccgattcgt gccatcttga cgctggcggc
     5161 cctcgcttcg gcgctgttga gcgctgcttg tgtcacgacg gaaccggtgt cgccggccgc
     5221 cgctggtcct gccacggcac ccgaaccggc gccaagcgcc tacgtcagca tgttgcgcag
     5281 ccagggtgtc gagactgcca ttccctcgcg cggcaaattc atcgtggtca acatcccgtc
     5341 cttcgagttg atcgccttgc aggacggtgt ccccgtcctg cgcagccgcg tggtggtcgg
     5401 ccggccggcg gcgccgaccc cagagcttct ctcctcgatg tttgccatcc aattcaatcc
     5461 tgcctggacg ccaacgccat tgatgatccg caatgaaggg ctgcactaca tgccgccggg
     5521 cccccagaac cctctcggcc ggatgatgtt cgacctcgac aatgacgagt ccatctacct
     5581 gcacgacacg aatgagaaag cgctgttcaa tcgcgcgcag cgtgccttga gccatggctg
     5641 cgtccgtgtg gagcaggcgc gcgcactggc cgcctggtcg ctcggtgttt cggaagaaga
     5701 aatcgatgcg atgatctcgc gagggacgac ctattccgtt ccgctgccgg aaatcattcc
     5761 ggtttctctc gtctactaca cgcggtttgc cgacgagcac ggccaggttg cctcccatcc
     5821 caacatctac gccgatcggc tggcggagaa atgagccatt cgcgcgtcgc cgcggaacgg
     5881 aagcatgaat ggcgcccaac aggctgatcc ttgacaccga cggcggagtc gatgacgccc
     5941 aggcactgct tctgctgatc gccgccgggc gcgcgccgga cgccatcacc acggtgtttg
     6001 gcaatgtcag cctggacgcc gccacccaga acgtcctggc ggtgcttgcc gtcgccggcg
     6061 cggtcattcc ggtccatcct ggagcagagc agccgcttgc ccaggagcgg atcgacgccc
     6121 gccatgtcca cggcgaggac gggctgggcg gcgcaccgcg tcccgaccgg acggccgaca
     6181 tcgccggctc ggatgcggtc ggtttcctgg tcaccacact gtcggacgcc gcggcgagcg
     6241 ccgatcccgt cgatcttctg atgatcggcc cgctgaccaa cctggcgctg gcgctgcagc
     6301 gcgcgccccg catcgccggc ggcgtcgggc agctcaccat catgggtggc acagtcttcg
     6361 gccgcggcaa cgtcacgccg gccgccgagt tcaacatatt ttcggatccc gaggcggctg
     6421 ccatcgtctt cgcggctggg gtcgaaacga cagtgattcc ctgggagcct tgtcttgcac
     6481 actcgctctc gggcgccgag atcgaccgga tgttcgagcc ggtggccgac agtgactaca
     6541 aggcattcgt gcaggccctc gtcgagcacg agcggaaaag gcatatccgc aacggccagg
     6601 gagactgtct cttcttcatc gatcctctgg ccgccgccgt cgtcgtcgag accggcatcg
     6661 tcacccgatc gatacgcgct tcgctggtgg tcgccctcga gccgggcatc acccgcggca
     6721 tgacggtggt cgacccgtcg ggccgactcg gaacgcccat ggtcacgctg gtcgaggaag
     6781 cccgcctcga ccgtctagcg gcgttcttcg cggcgtcggt ggcctattcg ccgcggcgca
     6841 tccgttagct tttcctatgg ctgccctcca attaaacatg catgggcggc gcaacgcgct
     6901 ttgcccttgg catgaaatga gctagctgaa tgtcggcaag agctttcaac ggcaagggtg
     6961 aatgccaggc atgacgaaac cggtggtcgg cgtgatcgga aacgcgcacg tcgtcaacga
     7021 ccgacacaac gtgcagcttg tgggccaaag caatctgcgg gcggtcgccg acgtcgcggg
     7081 cgcgctgccg ctgatgtttg ccggcacgcc ggacatcacc gacatcgacg cgcttttggg
     7141 cgcggtcgac ggcatcctgc tgacaggggc acgcgccaac gttcatccgg cgtgctttgg
     7201 cgtcgagccc gattcccggc acgaacccta cgaccatgat cgcgacgcca tggcgctggc
     7261 gctgatcgag gcctgcgtcg cccgcggcgt gcccctgttc ggcatctgcc ggggattcca
     7321 ggaaatgaac gtggcgttcg gcggctcgct gcatccggag atccgcgatc tgccgggacg
     7381 catgaaccac cgcatgcccc ggctggacaa cggcgagatc catcccgatc cgcacgtcgt
     7441 gttcgccgat cgccacgagg tgcggctggt ggcggacggc gtcttcgcga ggcttttagg
     7501 ccgcgagtcg atccgcgtga attcgcttca cggccagggc attctcgaac ccggcgaacg
     7561 gatcgtcgtc gagggtgtcg ccgaagacgg cacgatcgag gcaatccgca ttgccgacgc
     7621 tccgtctttc gcgctgggcg tccagtggca cgccgaatac gacccgcagc acaaccccat
     7681 caaccgcgcc ttgttcaagg ccttcggcgc cgcgctgctg gagcgccggc ggacctcgta
     7741 acgccgccgc gcctccgtag tatcgatcaa acctactgct gcgcccatgg tatcgttccc
     7801 cgatgacacc gacgcagcgc cccgacgatt atcccccgtc cgaggcaacg cgcaggcgtg
     7861 acgcggcctt gcgcgcggcg ttgagtatgc ccgcgattcc acacgcggcg tcgagtcgaa
     7921 aaacaaagaa aaattcgccc ccaaaacagg gagccaagaa gcgaggcgcg cgatgaagac
     7981 gcttttgatt atcggcgcga tcgccatcat tgctgtcgga gtgccagcat ttggctacgt
     8041 cattagatgg atcattcgcc gcccgctcac tcctgagcaa gagaagcaag aagagttgct
     8101 ccgcgaacgg cgcagagacg ctcgttattt ctggcgttga cgtaacagct tggcgagaag
     8161 ccttcgccgc gttgcgactt cgccgccctt agtgagtttg ttgataggta agccgtttcg
     8221 gactccacca ggagtcagaa atcctcgggc aacaggtcgt acgagccctt gcgtccacgc
     8281 tcatagactc tggccgcggt cgcgtagatc cgctcgcgat tgaggtcgaa ggcttgcagc
     8341 agcccggcct cgtcggacgg catgtcgggc tggatctgct tcagggcgcg ttcatccacg
     8401 aagaacggcg cttccatggc gccgtcgtac cccgaaaagc gcacggcgtg cacggccgca
     8461 tcgtagaagc ggctttcgtt gggaaaaccc agcggcatgg cccagacggt gcgccccggc
     8521 gacggcggag tccaccggca aagccgtcaa cttcgggcag ccaagcgcgc gaggcgacgg
     8581 cccatgagcg ttgccgcgag cgccgccgcg acgaagctcg cggggaccca caaggccgcg
     8641 gcggcgacat cgaccttgtt cagtcctgcc gagaggccgg cagcgttggc gaccaggccg
     8701 gcgagcgc
//
LOCUS       DASWGA010000378         4124 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_551234, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000378 DASWGA010000000
VERSION     DASWGA010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_551234"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..946)
                     /locus_tag="VF991_09085"
     CDS             complement(<1..946)
                     /locus_tag="VF991_09085"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX9556634.1"
                     /translation="MPIPSALVCVRCGARYPIDHFANDCQACRAARAPANLTVAYDSI
                     PGEGRTRDEAARRPASMWRWEAFLPASADDAVSLGEGNTPLLAAPALGLGDLWIKDES
                     RNPTWSFKDRLASSALTMARHFGAKVIASSSSGNAGAAAAAYAAKAGLPCVVFTFVGA
                     APPLVAQMRAYGAMVVTVEDKADRWRLQSAGVRQLGWYPTSPFFGPVVGSNPYGMEGY
                     KTIAFEIAEAFDWQVPDWCVLPVCYGDALFGVWKGFAELLALGWIDRIPRLAAAEVSG
                     SLEAALASGAAMPPVRLRNQPTIAPSIGADQGTIQALDA"
     gene            1033..2319
                     /locus_tag="VF991_09090"
     CDS             1033..2319
                     /locus_tag="VF991_09090"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006698610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9556635.1"
                     /translation="MRLGVFVQTPGHHVAGWRHPDAVAGGPNLALMKHIATTAERGKF
                     DMFFLGDGFATGYGEHPSTIGKFEPLTLLSALAMGTSRLGLAATASTTYAEPYHVARG
                     FASLDHLSGGRAAWNVVTTAYAKSGAVFGRQHPPHAERYAIAEEFVEACRILWDSWDD
                     DAFVADKKSGRFVRPGSLRVPDFKGKYFTVQGGLNVPRPPQGHPVLIQAGSSGPGRAL
                     AARIADVVFTAQNDRAEAQAFYSGLKGQVAGIGRRSDEVLIMPGVFPVIGRTEREAQA
                     IFAELNAKVDTAQAFTVLSERLGADMSVYPLDEPVPALPETENLKSRAALLLQMARRE
                     KLSLRQLFHRVAAARGHLLLVGSAVQIADVLENWFRSGAADGFNVMPPFFPGQFDDFV
                     ECVVPILQERGLFRADYAGSTLREHLGLKRPLRQGL"
     gene            complement(2307..3533)
                     /locus_tag="VF991_09095"
     CDS             complement(2307..3533)
                     /locus_tag="VF991_09095"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9556636.1"
                     /translation="MSKAAMAVARCVVVAAAITMVGNGTPMAQVQADMTSLDKELAPY
                     LERYKLPAVAAAVVKDGKIVAAGVAGTRRIGTVSPLTVKDRFHIGSDTKAMTSLLAAI
                     LIEHPKAGDRVKLDWKTTVGEVYPELLDKMAAGVKDITLEQLLSHTSGIPSDREEYIP
                     LLNYSVTDDPANLDGMRASLVARLVPMALTARPGQRFEYANVGYVLAGAMLEKLAGKT
                     WEELVVEQIFEPLQMASAGFGPQSSMGRVDAPLGHALDKNGQVRAFLAGPWGDNPAIV
                     GPAGTAHMNVLDFATWAAWNSMEGGLPPALVKPATIRKMHTKVIDMPPKPDAPVGTPS
                     SGGYGLGWGTVSLPFSSEPFVFHGGSNNMNLAYILLQPKKQLGLVALTNISGPPANDA
                     LKAIAEALYKRFGQSP"
BASE COUNT          709 a         1360 c         1376 g          679 t
ORIGIN      
        1 tcgcgtcgag cgcctggatc gtgccttgat cggcgccgat cgacggcgcg atcgtcggct
       61 ggttgcgcag ccgcaccggc ggcatcgccg cacccgacgc gagcgccgcc tcgagcgagc
      121 ccgacacctc ggcggcggcg agccgcggta tgcggtcgat ccaaccgagc gccagcagct
      181 cggcgaaacc cttccagaca ccgaacagcg catcgccgta gcagaccggc agcacgcacc
      241 agtcgggaac ctgccaatcg aaggcctcgg cgatctcgaa ggcgatcgtc ttgtagcctt
      301 ccatgccata gggattgctg ccgacgacgg gaccgaagaa aggcgacgtc ggataccagc
      361 cgagctggcg cacgcctgcc gactgcagcc gccagcgatc cgccttgtcc tcgacggtga
      421 ccaccatggc gccataggcg cgcatctgcg cgaccagcgg cggcgcggcg ccgacaaagg
      481 tgaagaccac gcacggcaag ccggccttgg cggcataggc cgccgccgcg gcgccggcat
      541 tgccggacga gctggaggcg atcaccttcg ccccgaaatg ccgcgccatg gtgagcgccg
      601 aggaggccag cctgtccttg aacgaccagg tgggattgcg cgattcgtcc ttgatccaga
      661 ggtcgccgag accgagcgcc ggcgcagcca gcagcggcgt gttgccttcg cccaggctca
      721 ccgcatcgtc ggctgacgcc ggcaggaaag cctcccagcg ccacatcgag gccggccgac
      781 gtgccgcctc gtcgcgcgtg cggccctcgc ctgggatgga gtcgtaggcg accgtgagat
      841 tggccggcgc tcgtgccgct cggcaggcct ggcaatcgtt ggcgaaatga tcgatgggat
      901 agcgggcgcc gcaacgaacg cagaccagcg cactgggaat gggcatttcg gcgcacgttg
      961 gcgtcccggg tgcaaagcgt caacatgcga gtcgtaaagc agaggacgaa cgtggatcga
     1021 caaaatcgtc agatgcgcct cggcgttttc gtccagacgc cgggacatca cgtcgccggc
     1081 tggcggcatc ccgatgccgt ggccggcggg cccaacctcg cgttgatgaa gcacatcgcc
     1141 acgacggcgg agcgcggcaa gttcgacatg ttcttcctgg gcgacggttt cgccaccggc
     1201 tatggcgagc atccctcgac gatcggcaag ttcgagccgc tgaccctgct ctcggcgctg
     1261 gccatgggca cgtcccggct gggactggca gcgaccgcct cgacgaccta tgccgagccc
     1321 tatcacgtcg cccgcggctt cgcctctctc gaccacctgt ccggcgggcg ggcggcgtgg
     1381 aacgtcgtga cgacggccta cgccaagtcg ggcgctgtgt tcggccgcca gcacccgccg
     1441 catgccgagc gctatgccat cgccgaggaa ttcgtcgaag cctgccggat cctgtgggac
     1501 agctgggacg acgacgcgtt cgtcgccgac aagaagagtg gacggttcgt acggccgggc
     1561 agcctccgcg taccggactt caagggcaag tattttacgg tccaaggcgg actgaacgtg
     1621 ccgcggccgc cgcagggaca cccggtgctc atccaggctg gctcctcagg ccccggccgg
     1681 gcgctggcgg cgcgcatcgc cgacgtggtg ttcaccgcgc aaaacgaccg cgccgaagcg
     1741 caggccttct acagcggact gaaagggcaa gtggccggca tcggccggcg cagcgacgag
     1801 gtgctgatca tgcccggcgt tttcccggtg atcggtcgta ccgaacggga ggcgcaagcg
     1861 atcttcgccg agctcaacgc caaggtcgat accgcccagg ccttcacggt gctgtcggag
     1921 cggctgggcg ccgacatgtc ggtctatccg ctggacgagc cggtgcccgc cttgccggag
     1981 acggagaatc tcaagagccg tgcggcactc ctgctgcaga tggcgcggcg cgagaagctc
     2041 tcgctacgcc agctcttcca ccgggtggcg gcggcgcgcg gccatctgtt gctggtcggc
     2101 agtgcggtgc agatcgccga cgtgctggag aactggttcc gctccggcgc cgccgacggc
     2161 ttcaacgtaa tgccgccgtt cttccccggg cagttcgacg acttcgtcga gtgtgtcgtg
     2221 cccatcctgc aggagcgtgg gctctttcgc gccgactacg cgggctcgac gctgcgcgag
     2281 catcttggtc tcaagcgccc cctccgtcag gggctctgac cgaacctctt gtagagcgct
     2341 tcggcgatcg ccttcagcgc gtcgttcgcc ggggggccgc tgatgttggt cagggcgacc
     2401 aaaccgagtt gcttcttggg ctgcagcagg atgtaggcga ggttcatgtt gttcgagccg
     2461 ccatggaaga cgaaaggctc ggacgagaac ggcagcgaaa cggtgcccca gccgaggccg
     2521 tagccgcccg acgacggggt gccgaccggc gcatcgggct tgggcggcat gtcgatgacc
     2581 ttggtgtgca tcttgcggat cgtcgcgggc ttgaccagcg ccggagggag gccgccttcc
     2641 atcgagttcc aggccgccca ggtcgcgaag tcgagcacgt tcatgtgcgc cgtccccgcg
     2701 ggacccacga tcgccgggtt gtcgccccac ggaccggcca ggaaggcgcg cacctgcccg
     2761 ttcttgtcga gcgcgtgacc gagcggcgca tcgacccggc ccatgctcga ttgcgggccg
     2821 aatcccgccg aggccatctg caacggctcg aagatctgct cgacgaccag ctcttcccag
     2881 gtcttgccgg cgagcttttc cagcatggcg ccggccagta catagcccac gttggcatat
     2941 tcgaagcgct ggccgggccg cgccgtcaac gccatcggca ccaggcgggc gacgagagag
     3001 gcgcgcatgc catcgaggtt ggcgggatcg tcggtgaccg agtagttgag cagggggata
     3061 tactcctcgc ggtcgctcgg aatgccgctg gtgtgcgaca gcagctgctc gagggtgatg
     3121 tccttcacgc cggcagccat cttgtcgagc agctcgggat agacctcgcc gacggtcgtc
     3181 ttccagtcca gtttgaccct gtcgccggcc ttggggtgct cgatcaggat ggcggcgagc
     3241 agcgaggtca tcgccttggt gtctgagccg atatggaagc ggtccttcac cgtgagcggg
     3301 ctcacggtgc cgatgcggcg ggtgccggcc acaccagcgg caacgatctt gccgtccttg
     3361 accacggcgg cggcgacggc gggcagcttg tagcgctcga gatagggcgc aagctccttg
     3421 tcgagcgagg tcatgtcggc ctggacttga gccatcggcg tgccgttccc aaccatcgtg
     3481 attgccgccg ccactaccac gcaacgcgcg acggccattg ctgctttcga catcgtcgac
     3541 acctcccagg ggtcgcgacc ttgtcctagc ggagagcggt gcgcaatgcc acattggaaa
     3601 cctggagcgg cctacaaagg ccatcggtag tattcaatcg aaatgctcta ccgaagagcg
     3661 acctgggcgc ggcgcatggt atcgacaggc cgctagcata ccgctcgtag aacttcgcaa
     3721 aacttgctct cgcggcacgg gtaaacgacg gattgcgcgc ctcggtgcaa atccgtctcg
     3781 acgataccaa cgatacaatt tggtcacgaa gacgatatct cggcaaaacg gtcagcggct
     3841 acgaaacaag gacgctgcaa tcgccagcga cgctgcaact actgccgcgc cgtccggggg
     3901 gacgaagtca aaggggagac aacgactttc atagtctgcc aattattttt agcccgtttc
     3961 aattgcttgc ctaaccattt gtccaacggg ggatatggga caatgaccgg ggagatcatt
     4021 tattttcgaa gccatctggc gctaaagcgg ggcctgcttt atcgccaaca agccgtgccg
     4081 cgccgcgctc aggcggcccg ccgctcgctt cacggtccgg acct
//
LOCUS       DASWGA010000379         7069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_425147, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000379 DASWGA010000000
VERSION     DASWGA010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7069
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425147"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VF991_09100"
     CDS             complement(<1..214)
                     /locus_tag="VF991_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 3 adenylate cyclase"
                     /protein_id="HEX9556637.1"
                     /translation="MKAGGVERRLAAILAADVAGYSRLMGSDEVATLRALQTHRRELV
                     DPSIARHHGRIVKTTGDGMLVEFASIV"
     gene            complement(314..1246)
                     /locus_tag="VF991_09105"
     CDS             complement(314..1246)
                     /locus_tag="VF991_09105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003580657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX9556638.1"
                     /translation="MEHTTVVGIDVSKERLDVHVLPSEEAWAVSRDADGLAELCRRLA
                     GLSGVVAVEATGGYETIVAASLSSAGLPLVVVNPAQVRAFAKALGQRAKSDPIDARVI
                     ARFAEATKPVVRPLPDQATRLLADLLARRRQIVGMVTAETQRLARTDVPRVRKSIERL
                     LLALKRELGEVDHDINDSVRGSPVWRDKEDLLASVPGVGKVIARTMVADLPELGTIGR
                     KQISALAGLAPFVRQSGKWKGQARIGGGRPSVRTALFLGAQSAKQHNPVLKAFYQRLI
                     ASGKSKMAATIAVAHKLLTILNAILRDKKPWQIA"
     gene            complement(1487..2263)
                     /locus_tag="VF991_09110"
     CDS             complement(1487..2263)
                     /locus_tag="VF991_09110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9556639.1"
                     /translation="MTASAQALRPPSRTLLLLEGRAVQELGAFMLMRPWLGAAPRGDG
                     HPVLVFPGLLASDFSTRPLRGFLGEQGYAVHGWEQGRNLGLRPGVEDEMLERVEALYD
                     RHGGRKLSLIGWSLGGIYARQLAKRLPGKVRSVISLGSPFAGSPKATNAGRVYEMASG
                     QRVDERDEHTAGPIAQPPPVPTTSIFSRSDGICAWQTCLNEERAEVENIEVYGSHCGL
                     GHHPAAVYAVADRLAQPEGQWKKFDRSGWKSLVFPDWRRS"
     gene            complement(2322..3776)
                     /locus_tag="VF991_09115"
     CDS             complement(2322..3776)
                     /locus_tag="VF991_09115"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="wax ester/triacylglycerol synthase family
                     O-acyltransferase"
                     /protein_id="HEX9556640.1"
                     /translation="MDQQQLSGIDASFLYLETPETPMHVAGLTYFQLPEGFEGSFYQH
                     FRRFFESRLHTIPIFSKRLAPSLYDLDHPGWVDDPDLDLDYHLRETTLPAPGSEAQLE
                     EVIGRLHANMLDRSRPLWQFYVITGLANGQGVLYSKVHHAAVDGGAGMAINKALYDVT
                     ATPREVAPPLPKPAASKPAPSSPTAVDPIKGIADIMGNMMRQQLRMWQAAPDIVNAMT
                     NAFLAKPGETPKALGTLKSLVDQLPTLNAPKTPFNTTITRERSYAARTISLADAKAVA
                     KASGAKLNDVVMAVCSGALRRYLQEKGQLPDKPLIAGVPISLREPGDTRQNNQVSGML
                     CQIATDIADPAERLRAIVKSSSQAKEIAGTFRDAVPQDFAFVGAPILLQLIMLVYGRS
                     GLADRLPMPMNVTISNVPGPPMPLYCAGAKVTALHPVSIAAHGAALNITVQSYMDALN
                     FGLTADRRAVPDVGRLGDYLVDAADELKKAVVPG"
     gene            3975..4424
                     /locus_tag="VF991_09120"
     CDS             3975..4424
                     /locus_tag="VF991_09120"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HEX9556641.1"
                     /translation="MTTANAALDTVIEHATETTKAASERVREFAQMGVRKATEGFEQI
                     SKAAQSASEELNSQINQAREGATKASLKVLEVAKEDADASFAAVRDFLAAKSPIEAYD
                     VSAKYWRGRLETRIAQAQDLGAFVRKAADDAVRPVQERIEKFTKAAV"
     gene            4523..6211
                     /locus_tag="VF991_09125"
     CDS             4523..6211
                     /locus_tag="VF991_09125"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase"
                     /protein_id="HEX9556642.1"
                     /translation="MDRFWLKSYPPGVPSDIDPSIYPSVVALLEESFAKYREQKAYVC
                     MDKAITFGEVDGLSKALAAWLQGRGLKRGARVAIMMPNVLQYPVAVAAVLRAGFIAVN
                     VNPLYTARELAHQLNDSGAEAVIVLENFAATLEQAIAGGAIKHVVVASMGDLLGLPRG
                     LIVNFVVRRLRKMVPAFALPGHFTFNDAIAAGRAMAFVPADLGPNDAAVLQYTGGTTG
                     VAKGATLLHRTIVANLLASEAWMQPGLRRKQLTGQFTIVCALPLYHVFAFIACGLLGM
                     RTGALNILIPNPRDMEGTVKELAKYRINIFPGVNTLFNGLVNRADFAKLDFSGLAISN
                     GGGMAVQEAVAKKWLAVTGCPIVEGYGLSETSAGVTCNPTDSEVYTGTIGLPLPNVEI
                     QILDDKGLELPLGEAGEIAIRGPQVMQGYWQRPDETALVMTPDGFFKSGDIGEMDARG
                     YIKIVDRKKDMIVVSGFKVFPNEIEAVVAAHPGVLECAVVGVPDAASGEAVMLFVVKR
                     DPSLTKEALAAYCAQQFTGYKRPKYIEFRDDLPKTNVGKILRRELRDSMLKKAA"
     gene            6289..6639
                     /locus_tag="VF991_09130"
     CDS             6289..6639
                     /locus_tag="VF991_09130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556643.1"
                     /translation="MTPAKLLVVAAVGLSASACSVSTTTTTAPPPPAPVAVVPATTTY
                     VAPAPATTTYVAPAPVATTVYTPPAKVTYVPAATTPPAGVQAFRDEYGFRYDGQGNRI
                     DAQGNIISPQSTRP"
     gene            6667..>7069
                     /locus_tag="VF991_09135"
     CDS             6667..>7069
                     /locus_tag="VF991_09135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556644.1"
                     /translation="MSVATLVGLALAGCSNVLPRPDYVDVKTPAAFRTEPGGVRVDNA
                     SYKLDAEGYRVDPQGERVGMIDVPAKTEGDNSNAVAGYYISSTGQVAPGRVASTSDIV
                     APPGSQPLPSQMPQQVPITPAPANVPPPPGYK"
BASE COUNT         1205 a         2351 c         2323 g         1190 t
ORIGIN      
        1 cgacgatgct ggcaaactcc acaagcattc cgtcaccggt ggttttgacg atacggccgt
       61 gatggcgggc gatgctcgga tcgaccagct cgcggcggtg cgtctgcagc gcacgcaacg
      121 tcgcgacctc gtcggagccc atcaaccggc tgtagccggc aacgtccgcg gcgaggatcg
      181 ccgcgaggcg ccgttcgaca ccgcccgctt tcatgacatc cctccgtgcc gtgacttcca
      241 ggctatgcac gccaccacgg cagaatacca tgatcttccg gaccgcaagc ctcctcagcg
      301 actgtgtcgc gggtcaagcg atttgccatg gctttttatc tctgaggatg gcgttgagga
      361 tggtgagcag cttatgagcg acagcgatcg tggcggccat cttggactta ccgctggcaa
      421 tcagccgctg gtagaaggct ttcagtacgg gattgtgctg ctttgccgac tgagcgccga
      481 ggaagagggc ggttcgtacg gagggccggc caccgccaat gcgggcttga cccttccact
      541 tgccggactg acggacaaag ggggcgaggc cggccagggc gctgatctgt ttgcggccaa
      601 tggtccccag ctcgggaagg tcggccacca tggtgcgggc gatgaccttg ccgaccccgg
      661 gaaccgaagc cagcaggtcc tccttgtcgc gccataccgg cgagccgcgt acgctgtcgt
      721 tgatgtcatg gtcaacctcg ccgagctcgc gcttcagcgc cagcagaagc cgctcgatgc
      781 tcttgcgcac gcggggcacg tcggtccgcg ccaaccgctg ggtctcggca gtcaccatgc
      841 cgacgatctg acgacggcgc gccaacagat ccgccagcag ccgggtcgcc tggtcgggca
      901 gcggccgcac cacgggcttg gtcgcctcgg caaagcgggc gatcacccgg gcgtcgatcg
      961 gatcgctctt ggcacgctga ccgagcgctt tggcaaaggc ccgcacttgc gccgggttga
     1021 ccacaaccag cggaaggccg gcgctcgaca ggctggcggc cacgatcgtc tcgtagcctc
     1081 cggtcgcctc caccgccacc acgccggaca ggccggccag acggcgacac agctcggcaa
     1141 ggccatccgc atcgcggctg accgcccatg cttcttcaga cggcaggaca tgcacgtcca
     1201 gccgctcctt cgacacatcg atgccgacaa cggtggtgtg ttccatggtg acccttcctt
     1261 gcttaagcgg gctcgcgatg cggcccttac gactgttcgg gttcacagga acgacggagg
     1321 gacgatcatg ctgaggatcg ggctcgagcg cccaagggcg agacgatctc ccctccgcca
     1381 ccgcaccgga tactctactc cgaccggccc tcgatgactt acaagggcga aggttacttc
     1441 gcccgacgcg ctcatgagcg agccggaggc tcgcggtcca gaagatttaa gaccggcgcc
     1501 aatccgggaa gaccaggctc ttccagccgg aacggtcgaa cttcttccac tggccctcgg
     1561 gctgggccag ccggtcggcg acggcataga ccgcggcggg atgatggccg agcccgcagt
     1621 ggctgccgta gacttcgatg ttctcgacct cggcgcgttc ctcgttgagg caggtctgcc
     1681 aggcgcagat gccgtcggag cggctgaaga tcgacgtcgt gggcaccggc ggcggctggg
     1741 cgatgggacc cgcggtgtgt tcgtcgcgct cgtcgacccg ctgacccgac gccatttcat
     1801 agacgcgccc ggcattggtc gccttcgggc tgccggcgaa cgggctaccc aggctgatca
     1861 ccgagcgcac cttgccgggc aggcgcttgg caagctggcg ggcgtaaatg ccgccgagac
     1921 tccagccgat caggctgagc ttgcggccgc catggcggtc gtacagcgcc tcgacgcgct
     1981 ccagcatctc gtcctcgacg cccggccgca ggccgaggtt gcggccctgc tcccagccat
     2041 gcacggcgta gccttgctcg ccgaggaagc cgcgcagcgg ccgggtcgaa aaatcgctgg
     2101 ccagcagtcc ggggaacacc agcacgggat gaccgtcgcc gcgcggtgcg gcgccgagcc
     2161 agggccgcat cagcatgaag gcgccgagtt cctgcacggc gcgaccttcg agcaacagga
     2221 gcgttcgcga ggggggacgc aacgcctggg cgctagccgt catcaggcct ccttgttcgt
     2281 tccgaccaac ctctcacata tcggaatcgc ggggaagcgt ttcaacccgg cacgaccgcc
     2341 ttcttgagct cgtccgctgc gtccacgaga tagtcaccga gacggccgac gtcgggcacg
     2401 gcgcggcgat cggcggtgag gccgaaattg agcgcgtcca tgtagctctg cacggtgatg
     2461 ttgagcgccg cgccgtgggc cgcgatcgac accggatgca gcgccgtcac cttggcgccg
     2521 gcgcagtaga gcggcatcgg cggaccggga acgttggaga tcgtgacatt catcggcatc
     2581 ggcaagcggt cggccagtcc gctgcggcca tagaccagca tgatgagctg cagcaggatc
     2641 ggcgcgccga cgaaggcgaa atcctgcggc acggcgtcgc ggaaggtgcc ggcgatctcc
     2701 ttggcctgcg aggaagattt cacgatcgcc cgcaggcgct cggcgggatc ggcgatgtcg
     2761 gtcgcgatct ggcacagcat gcccgacacc tggttgttct gccgcgtgtc gcccggctcg
     2821 cgcaggctga tcggcacgcc ggcgatcagc ggcttgtcgg gcagctggcc tttctcctgg
     2881 agatagcggc gcagcgcgcc gctgcacacc gccatcacca cgtcgttcag cttggcgccg
     2941 cttgccttgg ccaccgcctt ggcgtctgcg agcgagatcg tgcgcgccgc gtagctgcgc
     3001 tcgcgcgtga tggtggtgtt gaacggcgtc ttgggcgcat tgagcgtcgg cagctggtcg
     3061 accaggcttt tgagcgtgcc cagcgccttg ggcgtctcgc ccggcttggc gaggaaagcg
     3121 ttcgtcatgg cgttcacgat gtcgggcgcg gcctgccaca tcctcaactg ctggcgcatc
     3181 atgttgccca tgatgtcggc gatgcccttg atcggatcga ccgccgtcgg cgaactgggc
     3241 gccggcttgg aggcagcagg cttgggcagc ggcggcgcca cctcgcgcgg cgtcgccgtc
     3301 acgtcgtaca gcgccttgtt gatcgccatg ccggcgccgc catcgaccgc ggcatggtgg
     3361 accttggagt agagcacgcc ctggccgttg gccaggccgg tgatgacgta gaactgccag
     3421 agcggccggc tgcgatcgag catgttggca tgcaggcggc cgatcacctc ctcgagctgc
     3481 gcctcgctgc ccggcgcggg cagggtggtc tcgcgcagat gatagtcgag gtcgagatcg
     3541 ggatcatcga cccagcccgg atgatcgagg tcgtagagcg acggcgccag ccgcttggag
     3601 aagatcggga tggtgtgcag gcggctttcg aagaagcgcc ggaagtgctg gtagaagctg
     3661 ccctcgaagc cttcgggaag ctggaagtag gtgagccccg ccacatgcat cggcgtctcg
     3721 ggggtctcga gatagaggaa cgacgcgtcg atgcccgaca gctgctgctg gtccatgggc
     3781 cctcccgaaa atcgctttgg cttgtttcgt tgctcgattt gtcctcttta ttggctttct
     3841 aatcaattga taaataaaga taattaacat atcttctcgc atcgcacaaa tttatgttgc
     3901 aacgcaccat aaggctccca tataccgctg gtcagtccct tacccaccag taccaacgca
     3961 gcaggaaccg aaccatgacc accgccaatg ccgcgctcga caccgtgatc gagcatgcca
     4021 ccgaaaccac caaggccgcc agcgagcgcg tccgcgagtt tgcccagatg ggcgtccgca
     4081 aggcgaccga gggcttcgag cagatcagca aggccgcgca gagcgcctcg gaggagctga
     4141 acagccagat caaccaggcg cgcgaaggcg cgaccaaggc cagcctcaag gtgctcgagg
     4201 tcgccaagga agacgccgac gcaagcttcg ccgcggtgcg cgacttcctc gccgccaagt
     4261 cgccgatcga ggcgtacgac gtctcggcca agtactggcg cggccgcctg gagacccgta
     4321 tcgcccaggc ccaggatctc ggcgccttcg tgcgcaaggc ggccgacgat gccgtccgtc
     4381 cggtgcagga gcgcatcgag aagttcacca aggctgcggt ctaaaaccga cgccctctcg
     4441 aagcaaaggc ccgtcctcgc ggacgggcct ttttgctgcg cggcgctata gtgcggtcca
     4501 acgcgttccg gggaggagca gcatggatcg cttctggcta aaaagctatc cgccgggagt
     4561 tccgtcggac atcgatccgt cgatctatcc cagcgtcgtg gcgctcttgg aggagagctt
     4621 cgccaagtat cgcgagcaga aggcctatgt ctgcatggac aaggccatca ccttcggcga
     4681 ggtcgacggg ctttccaagg cgctcgccgc ctggctgcag ggcaggggac tgaagcgtgg
     4741 cgcgcgggtc gcgatcatga tgccgaacgt gctgcagtat ccggtcgccg tggcggccgt
     4801 cttgcgggcg ggctttatcg ccgtcaacgt caatccgctc tacacggcgc gcgagctcgc
     4861 ccatcagctc aacgattccg gcgccgaagc cgtgatcgtg ctggagaatt ttgccgcgac
     4921 gctcgagcag gcgatcgccg gcggcgcgat caagcacgtc gtcgtggcgt cgatgggcga
     4981 cctgctgggc ttgccccgcg gcctgatcgt gaacttcgtg gtccgccgct tgcgtaagat
     5041 ggtgccggct ttcgcgctgc ccggccattt caccttcaac gacgcaatcg ctgccggccg
     5101 agcgatggcc ttcgtgccgg ccgatctcgg gccgaacgac gcggcggtgc tgcaatatac
     5161 cggcggcacc accggcgtgg ccaagggtgc gaccttgctg catcgcacga tcgtggccaa
     5221 cctgttggcg tccgaagcct ggatgcaacc cggcctcagg cgcaagcagc tcaccggcca
     5281 gttcaccatc gtctgcgccc tgccgctcta tcacgtcttc gccttcatcg cctgcggcct
     5341 gctgggcatg cgcaccgggg cgctcaacat cctcattccc aacccacgcg acatggaggg
     5401 caccgtgaag gagctcgcca agtaccggat caacattttt cccggcgtca acacgctgtt
     5461 caacgggctg gtcaaccggg ccgacttcgc caagctcgat ttctccgggc tggcgatctc
     5521 caacggcggc ggcatggcgg tccaggaggc ggtcgccaag aaatggctcg ccgtcaccgg
     5581 ctgcccgatc gtcgaaggct atggcttgag cgaaacctcg gccggcgtga cctgcaatcc
     5641 gaccgattcg gaagtctaca ccggcaccat cggcctgccg ttgcccaacg tcgagatcca
     5701 gatcctcgac gacaagggct tggaactgcc gctgggcgag gcgggcgaga tcgccatccg
     5761 cggcccgcag gtcatgcaag gctattggca gcggccggac gagacggcgc tcgtcatgac
     5821 gccggacggt ttcttcaagt cgggcgatat cggcgagatg gatgcgcggg gctacatcaa
     5881 gatcgtcgat cgcaagaagg atatgatcgt ggtctcgggc ttcaaggtct tccccaacga
     5941 gatcgaagcc gtggtggcgg cccacccggg cgtgctggaa tgcgcggtgg tcggcgtgcc
     6001 cgatgccgcc tccggcgagg cggtgatgct gttcgtcgtg aagcgggatc cgtcgctcac
     6061 caaggaagcg ctggccgcct actgcgcgca gcaattcacc ggctacaagc ggccgaaata
     6121 catcgagttc cgcgacgacc tgcccaagac caatgtcggc aagatcctgc gccgcgagct
     6181 gcgcgacagc atgctgaaaa aagccgcctg attggcgcat gtcacgtgca acctcgcggg
     6241 cttttccgcg tttcaccggg gagatttttg cccgtgagga ggggtgcgat gacaccagcc
     6301 aagcttcttg tcgtggccgc cgtcggcctg tcagcgtccg cgtgcagtgt ttccacgacc
     6361 accaccacgg cgccgccgcc gccggcgccg gttgccgtgg tccccgccac caccacctat
     6421 gtcgcgccgg ctccggccac gaccacctat gtcgcgccgg ctcccgtagc gaccaccgtt
     6481 tacacgccgc ccgcgaaggt cacctatgtg ccggccgcga ccacgccgcc ggcgggcgtt
     6541 caggccttcc gcgacgagta cggtttccgc tatgatggcc aggggaaccg gatcgacgcc
     6601 cagggtaaca tcatcagccc gcagtcgacc cgtccctgaa cagggggcgc gatggctgcg
     6661 agatgtttga gtgttgcgac gctggtgggc ttggcactgg cgggttgtag caatgttctg
     6721 ccgcggcccg actacgtgga cgtcaagacg ccggccgcct tccgcaccga accgggcggc
     6781 gtgcgggtcg acaacgcgag ctacaagctc gacgccgaag gttaccgcgt cgacccgcag
     6841 ggtgaacggg tcggcatgat cgacgtgccg gccaagacgg aaggcgataa ttccaatgcc
     6901 gtcgccggct attacatcag ctcgaccggc caggtcgcgc ccggccgcgt cgcctcaacc
     6961 agcgacatcg tggccccgcc gggcagccag ccgctgccct cccagatgcc gcagcaggtc
     7021 ccgatcaccc cggcgccggc caacgtgccg ccgccgcccg gttacaaat
//
LOCUS       DASWGA010000380         5144 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1053361, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000380 DASWGA010000000
VERSION     DASWGA010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5144
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1053361"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VF991_09140"
     CDS             <1..374
                     /locus_tag="VF991_09140"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9556645.1"
                     /translation="AAWTARRSPDEAMNALQKVGVAAGAVRHPMDLLDDPHLEARGFW
                     QWIERAYVGRHPQPSPPYREGDAPIAVRTPAATLGQYNDEVLGGLLGLSKSELARLAR
                     DSVIGSEALPPAQRKARAMTG"
     gene            397..2031
                     /locus_tag="VF991_09145"
     CDS             397..2031
                     /locus_tag="VF991_09145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9556646.1"
                     /translation="METFDYVIVGAGSAGSVLANRLSEDEKVTVCVLEAGPWDWHPFI
                     HIPAGFMYTLVNPRVNWLYTSEASEWTGGRRIAAPRGKTLGGSSSINGHIYNRGQRLD
                     FDGWAQRGNHGWGYADVLPYFRRTERRMGGDDLFRGRDGQLPITDLDWRDPLCEAFIE
                     GAVQMGIPRNQDYNGALQAGVSYVQRIIQNGRRQSAARGYLHPAMKRRNLTVRTNAHV
                     TEIVLVGKRAVGVRYRKGGRDGPSVEVRAAKEVILSSGAVNSPQLLQVSGIGPAPLLQ
                     SLGIEVRHALPGVGENLRDHYAPRFVARVKNAETINERSHGLKLVGEVLKYAVARKGI
                     LALNPTLIYVFWKSDERVDNYDLQLTFTPASYKEGVQSTLDDFPGMTIASWQQRPESS
                     GYVRARSADPFEHPIIQPNYLVAESDRRVLLAGMKLARRLLASRPLSKYYDREEFPGP
                     HVQSDDELLGAAKERGTTTFHLMGTCRMAPDSDPTAVVDDQLCVRGLLGLRVADASIM
                     PSMPSANLNASALMIAEKAADMIRGKPPLEAAVLKD"
     gene            2039..3142
                     /locus_tag="VF991_09150"
     CDS             2039..3142
                     /locus_tag="VF991_09150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase"
                     /protein_id="HEX9556647.1"
                     /translation="MANAGNEPAADAIARLVPATLKALHALEFAGRHLAPDSLPQLIE
                     AMAGRDDELNAALTLSRALDWPGRLAPVRDCLEPAAEAAGQGIAGLRSAGKAPQPIVA
                     AYRALRSYAKAAQSLYPLAAFLEPVSQFFLEQGARSDPALTDRLAAVDPARERVGVMH
                     VGGPPGTRGAFSLYVPEYYDAASAYPLVVAMHGGSGNGGAFLWGWLREARTRGLIVIA
                     PTAIGSTWSLMEPDIDGPSIDRMVDHVAQQWPVDAGHKLLTGMSDGGTFTYVLGVREN
                     CRFTHLAPIAAAFHPLMMTSASADRVRGLPIHIVHGARDWMFPPEVAQGAERTLAQAG
                     AAVVYREIADLSHTYPRDENGPILDWFLGRAAT"
     gene            3196..3867
                     /locus_tag="VF991_09155"
     CDS             3196..3867
                     /locus_tag="VF991_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008550907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEX9556648.1"
                     /translation="MLEARFPRIPGDMGNATTWPFPVLYRIVKGATPESVVLKGAAGL
                     LPAFLEAAAELVHHGAEAITTNCGFLSLFQKELAAHVKVPVATSALLQVPWVQATLPP
                     GKRVGVITVSAASLTPRHLEAAGVPLDTPFVGTEKGREFFRVLILGEKDDMDVAKAEQ
                     DILDAGKSLMAAHPDIGAIVLECTNMPPYAAALRDALGVPVHDIYSMITWFHAGLRPR
                     RFTTG"
     gene            complement(3854..5026)
                     /locus_tag="VF991_09160"
     CDS             complement(3854..5026)
                     /locus_tag="VF991_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9556649.1"
                     /translation="MSRTARMLGVGVLLALVATVATGAWSHLSQYRQVMATAEQRRDF
                     VPTIRVGTVRASEADRVVSLPGTTSAFATANIFARASGYVDQRNVDIGDRVKAGQLLA
                     TIVAPELDHQIAQAEATLKQLQSTLQQRKAARELARVTWERDKPVVQKGWLPQQQGTI
                     DEQTLRQQEATVKEARNNVVAQEAQVNVLHQQKIYQSVVAPFDGVITQRNIDIGTLVQ
                     ADATAGTFMFTIMKGNVIRTQVFVPQDAAFGLGPGVPAVVRVPEMPDRTFPGTVTRIA
                     DALQPGSRTLLTEIDIANPDGVLTAGIYCTVELHIPRKTASFSVPASAIVFNANGVQV
                     AVVENGVARIRKITVARDLGTEVEARDGVKAGDQVILNPPVDLVDGAKVQVRASPS"
BASE COUNT          795 a         1784 c         1736 g          829 t
ORIGIN      
        1 tcgcggcgtg gacggcgcgg cgttcgcccg acgaggcgat gaacgcgctg caaaaggtgg
       61 gcgtcgccgc cggcgcggtc cgccatccca tggatctgct cgacgaccct cacctcgagg
      121 cgcgcggctt ctggcagtgg atcgagcgcg cctatgtcgg ccgccatccg cagccttcgc
      181 cgccttaccg cgaaggcgat gccccgattg ccgtgcggac tcccgccgcc acgctggggc
      241 aatacaatga cgaggtgctg ggcggcctgc tgggcctgtc caaatcagag ctggcgcggc
      301 tcgcccgcga cagcgtcatc ggctcggagg cgctgccgcc cgcccagcgc aaggcgcggg
      361 ccatgaccgg ctagaagctg caacggtagg gacgcgatgg aaaccttcga ctacgtgatc
      421 gtcggcgccg gatcggccgg cagcgtgctc gccaaccgcc tgagcgaaga cgagaaggtc
      481 accgtctgcg tgctcgaagc ggggccgtgg gactggcatc cattcatcca tattccggcc
      541 ggcttcatgt acaccctggt caatccgcgg gtgaactggc tctatacgtc ggaggccagc
      601 gaatggaccg gcggccggcg catcgcagcc ccgcgtggca agacgctggg cggctcgagc
      661 tcgattaacg gccacatcta caatcgcggc cagcggctcg acttcgacgg ctgggcgcag
      721 cgtggcaatc acggttgggg ttatgccgac gtgctgccct attttcgccg gaccgagcgg
      781 cggatgggcg gcgacgacct gttccgtggc cgcgacggcc agctgccgat caccgacctc
      841 gactggcgcg atccgttgtg cgaggccttc atcgagggcg cggtgcagat gggcatcccg
      901 cgcaaccagg actacaacgg cgcgctgcag gcgggcgtga gctacgtgca gcgcattatc
      961 cagaacggcc gccgccagag cgcggcgcgc ggctacctgc atccggcgat gaagcgccgc
     1021 aatctcacgg tgcgcaccaa cgcgcacgtc accgagatcg tcctggtggg caagcgcgcc
     1081 gtcggcgtgc gctatcgcaa gggcggccgc gacggcccct cggtcgaagt gcgcgccgcc
     1141 aaggaggtga tcctgagcag cggcgcggtg aactcgccgc agctcctgca ggtgtcgggc
     1201 atcggtccgg cgccgctgtt gcaatcgctc ggcatcgagg tgcgccacgc gctgccgggc
     1261 gtgggcgaga acctgcgcga tcactacgcg ccgcgcttcg tcgcccgggt caagaacgcc
     1321 gagacgatca acgagcgctc gcacgggcta aagctggtgg gcgaagtgct gaaatacgcg
     1381 gtcgcgcgca agggcatcct ggcgctcaat ccgaccctca tctacgtgtt ctggaagtcc
     1441 gacgagcggg tcgacaacta cgacctgcag ctcaccttca cgccggcgag ctacaaggaa
     1501 ggcgtgcagt cgaccctcga cgatttcccg ggcatgacca ttgcctcctg gcagcagcgg
     1561 cccgagagca gcggctatgt ccgcgcgcgc tcggccgatc cgttcgagca tcccatcatc
     1621 cagccgaatt acctggtcgc cgaaagcgac cggcgcgtgc tgctggccgg catgaagctc
     1681 gcccgccggc tgctcgcctc ccggccgctc agcaaatact acgaccgcga ggagttccca
     1741 ggcccgcacg tgcagtccga cgacgagctt ttgggcgccg ccaaggagcg cggcacaacg
     1801 accttccatc tcatgggcac ctgccgcatg gcgcccgaca gcgatcccac cgccgtggtc
     1861 gacgaccagt tgtgcgtgcg cgggcttttg ggcctgcgcg tggccgatgc ctcgatcatg
     1921 ccgagcatgc cctcggccaa cctcaacgcc tcggcgttga tgatcgccga gaaggccgcc
     1981 gacatgatcc gcggcaagcc gccgttggaa gccgcggtgc tgaaggactg acacgccaat
     2041 ggccaacgca ggcaacgagc ccgccgccga tgccatcgcc cgattggtgc cggcgactct
     2101 gaaggccctg cacgccctcg aatttgccgg ccgccatctc gcaccggatt ccctgccgca
     2161 actgatcgag gccatggccg gccgcgacga cgagctgaac gcagccctca cgctgtcccg
     2221 cgccctcgac tggccgggac gcctggcgcc ggtccgcgac tgcctcgagc cggcggcgga
     2281 ggcggccggc cagggcattg ccggactgcg ctcggccggc aaggcgccgc agccgatcgt
     2341 tgctgcctac cgggcgctgc gcagctacgc caaggccgcc cagtcgctct atcccctggc
     2401 ggcgtttctc gaaccggtca gtcaattctt cctcgaacag ggagcgcgca gcgatccggc
     2461 gctgaccgat cgcctcgccg cggtcgatcc ggcgcgcgag cgtgtcggcg tgatgcatgt
     2521 cggcgggccg cccggcacac gcggtgcctt ctcgctttac gtgcccgaat attacgatgc
     2581 ggcgagcgcc tatccgctgg tcgtggcaat gcatggcggc agcggcaatg gcggcgcttt
     2641 cctgtggggc tggctgcgcg aggcgcgcac ccgcggcttg atcgtgatcg cgccgacggc
     2701 catcggctcg acctggtcgc tgatggaacc ggacatcgat gggcccagca tcgaccgcat
     2761 ggtcgaccat gtcgcccagc agtggccggt cgatgccggg cacaagctcc tgaccggcat
     2821 gagcgacggc ggcacgttca cctacgtgct gggcgtgcgc gagaactgcc gcttcaccca
     2881 tctggcgccg atcgcggcgg cctttcaccc cctgatgatg acctccgcca gtgccgaccg
     2941 cgtgcgcggc ctgccgatcc atatcgtgca tggcgcgcgg gactggatgt ttccgcccga
     3001 ggtggcgcag ggcgccgaac ggacgctggc ccaggccggg gccgccgtgg tctatcgcga
     3061 gattgccgac ctctcgcata cctatccgcg cgacgagaat ggtcctatcc tcgactggtt
     3121 cctggggaga gccgcgacgt gagcatcatt gcaaagggtg gcaaggccct ctacggcgcg
     3181 ccgctcggca tcctgatgct ggaggcgcgg tttccccgta tcccgggcga catgggcaac
     3241 gccacgacct ggccttttcc ggtgctctat agaattgtga agggcgcgac gccagagtcc
     3301 gtggtgttga agggcgccgc gggactgctg cccgccttcc tcgaggcggc cgccgagttg
     3361 gtccatcacg gtgccgaggc catcaccacc aattgcgggt tcctgtcgct gttccagaaa
     3421 gagctggcgg cgcacgtgaa ggttccggtg gcgaccagcg cgcttctgca agtgccatgg
     3481 gtccaggcga ccttgccgcc cggcaagcgg gtcggcgtga tcaccgtcag cgccgcgtcg
     3541 ctcacgcctc ggcatctgga agcggccggc gttcccttgg acacgccgtt cgtcggcacc
     3601 gagaagggcc gcgaattctt ccgcgtgctg atcctgggcg agaaggacga catggacgtg
     3661 gccaaggccg agcaggacat tctggacgcc ggcaagtcgc tgatggcggc ccatcccgac
     3721 atcggcgcca tcgtgctcga atgcaccaac atgccgccct acgccgccgc gctacgcgac
     3781 gcgctgggcg tgccggtcca cgacatctac tcgatgatca cctggttcca cgccggcctg
     3841 cggccgcgcc gcttcacgac gggctagcgc gcacctggac cttggcgccg tcgacgagat
     3901 cgaccggggg attgaggatc acctggtcgc cggccttgac gccgtcgcgc gcttcgacct
     3961 ccgttccaag gtcgcgcgcc accgtgatct ttcggatgcg cgccacgcca ttctccacca
     4021 cggcgacctg cacgccgttg gcattgaaga cgatggcgct ggccgggacc gagaagctcg
     4081 ccgtcttgcg cggaatgtgc agctcgacgg tgcaatagat gcccgccgtc agcacgccgt
     4141 cgggattggc aatgtcgatc tccgtcaaca gcgtccggga gccgggctgc agcgcgtcgg
     4201 cgatccgcgt caccgtgccc ggaaaggtgc gatcgggcat ctcgggaacg cgcacgacgg
     4261 ccggcacgcc gggacccagg ccgaacgccg cgtcctgcgg cacgaagacc tgggtgcgga
     4321 tgacgttgcc cttcatgatg gtgaacatga aggtgccggc ggtcgcatcg gcctgcacca
     4381 gggtgccgat gtcgatgttg cgctgggtga tgacgccgtc gaacggcgcc acgacactct
     4441 gatagatctt ctgctggtgc aggacgttga cctgggcttc ctgggcgacg acgttgtttc
     4501 gcgcctcttt gaccgtggct tcctgctgcc tgagggtctg ctcgtcgatg gtgccctgct
     4561 gctgcggcag ccatcccttc tggaccaccg gcttgtcgcg ctcccacgtc acgcgcgcca
     4621 gctcgcgggc tgccttgcgt tgctgcagcg tcgactggag ctgcttcagc gtcgcctcgg
     4681 cctgcgcgat ctggtgatcg agctcgggcg ccacgatcgt ggccaggagc tggcctgctt
     4741 tcacccggtc gccgatatcg acgttgcgct gatcgacgta gccgctggca cgggcgaaga
     4801 tgttggcggt ggcgaaggcc gacgtcgtgc cgggcaggct gacgacccga tcggcctcgc
     4861 tggcccgcac cgtgccgaca cggatggtcg gcacgaagtc gcgccgctgc tcggcggtcg
     4921 ccatgacctg gcgatactgc gaaagatggc tccacgcgcc ggtcgcgacg gtcgccacga
     4981 gcgccagcag aacgccgaca cccagcattc gcgctgtcct gctcatgtca cttcctcctc
     5041 gaacacgccg tgcgctggct tgccgtcgtt gcccgaccgc agcttggcga acagccaggg
     5101 cacgacgagc agcgtcgtcg gcgtggcgaa catcaggccg ccga
//
LOCUS       DASWGA010000381        10127 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1566007, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000381 DASWGA010000000
VERSION     DASWGA010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10127
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1566007"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="VF991_09165"
     CDS             complement(<1..482)
                     /locus_tag="VF991_09165"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX9556650.1"
                     /translation="MTAAARFAAHAIDTRFSDLPPAAVQRAKVFVLDSLGVGIAGSSV
                     DGAEGLLRVAAGWGAPAVPVWGRAARLSAPAAAFVNAWQMHNQEYDCLHEGAVVHAMA
                     TVLPAALAAAEMKGGVSGADLIAAIAVGVDIAADLGLASRAGFRFFRPGTAGGFGATA
                     A"
     gene            544..1725
                     /locus_tag="VF991_09170"
     CDS             544..1725
                     /locus_tag="VF991_09170"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9556651.1"
                     /translation="MISDPYERLGVRRRINAAGALTRLGGAVMAPEVMDAMAAASRAS
                     VDIGELQDAASQRIAEATGAEAGLVTTGAAAALTLAAAASIARWDVAKMAALPHAEAF
                     AHDILIPRTHRTGYAHALAASGARLVDIGHNDRGTGAGVRGLEAWEIESALSPSVVAV
                     AFSANAASLADLPTAAAVCRANGVPLIVDAAAQLPPKENLKRFVSMGADLVAFSGGKA
                     LGGPQASGILAGRRDLLASALLQQLDMDVAPETWTPPKMVDRANLRGVPHHGIGRGFK
                     AGKEEIVGLLTALDRFVKADDAADNARLEARLKAIAAALGGHDVKLVPSSVTGRVPVL
                     EIAAPDALALSACLQRGDPPVHLSERHAVRGVLTLDPQVLLPEQDAPLAAAIRAALAS
                     G"
     gene            complement(1715..3364)
                     /locus_tag="VF991_09175"
     CDS             complement(1715..3364)
                     /locus_tag="VF991_09175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556652.1"
                     /translation="MTPLSDTATSLVASLNQRHNRLAASWVSGSPSANDARALVTDIV
                     AAGAVVPDGPERDSLRNLLYFWCSEEAVIDAERGTLPRLDAFRPQTPETHAAAPSPPA
                     DAVAASAPAAGGGIGATVAGVAEPVLRSVMTGMFKQVADRLRSTDARKDQSPPSPSAT
                     SPAGPPSDAEARAIVRISALARQWRMTDEINKRGYLLTGKALAEASLFMDRDPEIKAL
                     VTASEKSERFTTWVKRGLVVLAFVALASLAYLFKVDGDRKAQVAEAEVQVAKAEARAA
                     TELTRQQSTDSLHNRATVQTAVDALSRDDLDPLKRYLESMGANRYEVSRLQLQAATPV
                     QKEVDATVAPPQRTAPPQLQVAAAGVATCSGYLWFGSKSDSRLANDSDPALLKSGESV
                     VLDARADIRLRAEWPPESYVMPRQVGLVPAGGQVTLSSDIRTYRRSLGDQIWAQVTVP
                     RTYCSTVFLQYVGPTEKRRSVIDALRAMGVQAPPSEQIASAKGLAEARYFFPEDKPVA
                     EQVATTLSAFNGDKKLGVLYVANVPVKPSPGTIEVWLDLNR"
     gene            complement(3361..4665)
                     /locus_tag="VF991_09180"
     CDS             complement(3361..4665)
                     /locus_tag="VF991_09180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556653.1"
                     /translation="MPMTLSLSPDDSEVLRKIVAERCTPDDCKEALKRVPGAPSWNRI
                     ALTSVDMDVLSQQLLQKLRLEQAYLPTSLLLRIMEQAWQLEDVRFGISEKLPSLVRPP
                     RGVATWVKTLTEALTAMQDKLSPWPPGTPAGALFARLCKERGELQKVVDALKLFAALK
                     SIHDALHSLQVEGAKWLDALAKRDGDATVATLILALSRVIKTTTAPPDKLPSDIGDSC
                     GRCSKTSLDADRLLRGGKADEIAFACAKLRQMLMREPPLIDAAMFSVSREFPLVGFCT
                     LFEDAPVREAAFDLGDTLRRRLMEHALWQAADQGLYEIEQVLAHPPDNLLGELVDRVP
                     WTTLYLEALFDGATSDRAIGGLNTAIRSHVLSTDGPLPAGAAPASLEAVRAAFAELLG
                     AARSAFLDADRALKDDFSQLLALQQPLTGILDRVRPGCEFFK"
     gene            complement(4675..5766)
                     /locus_tag="VF991_09185"
     CDS             complement(4675..5766)
                     /locus_tag="VF991_09185"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEX9556654.1"
                     /translation="MKRLSAEETSKLVELLYVAVDFNQLERFVYLGTGDRLFGKFVGT
                     GMSLYDTIDKLIEKLEKGPITDRFLRVVYREKPLQTDLRACILELYPDIAPKAAREAV
                     KFEFQKAGATTAPESEGPGLEANVRPALKTLDIEIWLSRIETIKRQVCRVEADGAGIG
                     TGFLVGPDAILTNWHVAEAARRQGALAKLGCRFDYRRLTGGGVDAGTLIAATTVADER
                     RCSGAELTKQPDTPPPTPDQLDYALLRLATPVPERGFLRLSDPPPSAKDDPLIIVQHP
                     AGDPMRFAMDTSAVIGAVHDGLRLRYRTNTAAGSSGSPCFSMEWDLLALHHLGDPAAG
                     PPTYNQGVPVGLIRKSIETKNEAKALLGV"
     gene            complement(5910..7013)
                     /locus_tag="VF991_09190"
     CDS             complement(5910..7013)
                     /locus_tag="VF991_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556655.1"
                     /translation="MSSALLIEHLVKRFATGKPAVDDVSFDVPAGEIVVLLGPSGCGK
                     TTTLRCVAGLEHPTGGRISIGDRVVSEPERGVLVSPRERDIGMVFQSYAVWPHMTVRQ
                     NVAYPLKHRRNGSGGDINAKVDETLSLVGLGDYAERSVTSLSGGQMQRVALARSLVYR
                     PQLLLLDEPLSNLDAKLRVRLRDELRRILKQTGMTGLYVTHDQSEAVVLGDRIGVMRE
                     GKLLQMAPPAEIYNRPADPFVANFTGASNVLLGKVLTRTGERATIDLGAAGRIEAWTP
                     QPLSPGDKARVALRAENVRLGERGSANAFSGRVIERRYQGMQTVYDVDLGGQRLEALE
                     LGTAARHDDGEIALTLPPDMCWAYRDEGASSVE"
     gene            complement(7010..8038)
                     /locus_tag="VF991_09195"
     CDS             complement(7010..8038)
                     /locus_tag="VF991_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9556656.1"
                     /translation="MKHAMTLATAIGLALALAGLPALAQNEFGSKELIEAAEKEGQLT
                     YYTANFAETEQEVIKEFNKRFPKVKVAMVRAPGGQLITRIKTEAAAGKLGADVVNHSD
                     RGLMLELADLFQDYTPPNAADYRPDALVSPKFWPGVTLGWAIAYNTQLVKNAPKSWKD
                     LLNPEYKGKQIGQVVGPSGGTTWTRVMFERQVLGEDYWQKQAALGIGLYPSGAPLSDA
                     VVRGEISIAPLLYNIIYTKIVEGAPAEAIFAPEGVPIIPYADGIPKTAKSPNAAKLFM
                     NWRLSKEGQAFQIAKLGNITSLKEPPSFPKGWDPKVIKVWVPNFKEFESLRESWLEQW
                     NKTYGYRQ"
     gene            complement(8065..9822)
                     /locus_tag="VF991_09200"
     CDS             complement(8065..9822)
                     /locus_tag="VF991_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX9556657.1"
                     /translation="MTATSAVLPASTNAAAAPRRLAAPLWVGALLIVLAFLVIYPLLM
                     LIFGALSDSNPVVDGFGNFKPSVKHFVDVLGNENVHLAFFNALAACGGGTILAVVIGL
                     AFSWIVVRTNTPFKGFIAGASLIPLFVPPLVAGVAWGILGSPKTGLLNTALKWLSIDF
                     RFNFYSMSGLIIVFGIYYAPYVYMFTASALKNMDPSLEEASEVAGASAFTTLFTVTFP
                     LIAPAILAGSLLSFVVMLGIYGVPAALGAPADINVLTTYIFKLTAWSPPLYNTAAAVA
                     ILLMVVTAILVWAQQRVLSGKSFATVAGKAFRPRALNLGPWRWFTLGLAIAYLLIVVV
                     LPTLALVIAAFRKFMFFKDFDALFDMKQYSWVHFNAVFDNPLTMLSIWNTLKVGVITA
                     LAGGALAFAIGYTVNRTRVAGRRSIDLLATLPVAIPGLVIGVAYLWAWIGLPGGLYGT
                     IWILALAFVARFMPDTVKALSTSFLQIHKELEEAAWISGRGMLSTIRTIVLPLARPGV
                     VASMTLLFVLAIRELGSSLFLYTSDTTVMAVLLLDYYEGGNTGKTAAFSLVQTAILAV
                     LLSITTWLSRETTQSARFN"
     gene            9921..>10127
                     /locus_tag="VF991_09205"
     CDS             9921..>10127
                     /locus_tag="VF991_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HEX9556658.1"
                     /translation="MKLRTHDRYDYVPLSGRPDYSWPGGKKLAVYFALNLEHFSFGEG
                     LGAELAPGGPSPDVLNFSWRDYGNR"
BASE COUNT         1640 a         3321 c         3481 g         1685 t
ORIGIN      
        1 gccgctgtgg cgccgaaccc gccggccgtg ccgggacgga agaagcgaaa gcccgcgcgg
       61 gaggcgaggc ccagatccgc ggcgatgtcg acgccgacgg cgatcgccgc aatcaggtcg
      121 gcgccgctca cgccgccctt catctcggcg gccgccagcg ccgccggcag caccgttgcc
      181 atggcgtgca cgactgcgcc ctcgtgcagg cagtcgtatt cctggttgtg catctgccag
      241 gcgttgacga aggccgcggc cggtgcggac aggcgggccg cacggcccca caccggcaca
      301 gccggcgcac cccagccggc ggccacgcgc aacaggccct cggcgccgtc gaccgatgag
      361 ccggcgatgc cgacgccgag actgtcgagc acgaagacct tggccctctg cacggcggcc
      421 ggcggcagat cgctgaaacg cgtgtcgatc gcgtgggcag caaagcgggc ggcagcggtc
      481 atgtcggccg cactctacac gaaggggcgc cctttgatgg gcgttctgcg ataagctgcc
      541 ctgatgatct ccgatcccta cgagcgtttg ggtgttcgtc gccgcatcaa cgccgccggc
      601 gcgctcacgc gtctcggcgg cgcggtcatg gcgcccgagg tcatggacgc gatggcggcc
      661 gcctcgcgcg cgtcggtgga catcggcgaa ctgcaggatg ccgcgagcca gcgcatcgcc
      721 gaggcgaccg gcgcggaggc ggggctggtc accacaggcg ccgccgcggc gctcacgctg
      781 gccgccgccg catcgatcgc gcgctgggac gttgccaaga tggcggcgct gccgcatgcc
      841 gaggcgttcg cacacgacat cctgatcccg cgcacccatc gcaccggcta cgcccacgcg
      901 ctcgccgcct ccggcgcgcg gctggtcgat atcggccaca acgaccgcgg caccggagcg
      961 ggcgtgcgtg gcctggaagc gtgggagatc gaaagtgcgc tgtcgccatc ggtcgtggcc
     1021 gtggccttct cggccaatgc agcgagcctc gccgatctgc cgacggcggc agcggtgtgc
     1081 cgcgccaacg gcgtgccgct gatcgtcgat gccgccgcgc aactgccgcc caaggagaac
     1141 ctgaagcgtt tcgtttcgat gggcgccgat ctggtggcct tctccggcgg caaggcgctg
     1201 ggcgggccgc aggcttcggg catcctcgcc ggccgtcgcg atcttttagc ctcggcgctg
     1261 ctgcagcagc tcgacatgga cgtggcgccc gagacctgga cgccgcctaa aatggtcgat
     1321 cgcgccaacc tgcgtggcgt gccgcaccat ggcatcggcc gcggcttcaa ggccggcaag
     1381 gaggagatcg tcggcctgct caccgcgctc gatcgcttcg tgaaggccga cgatgcggcg
     1441 gacaatgccc ggctggaggc gcggctgaag gcgatcgcgg ccgcgttggg cggtcacgac
     1501 gtgaagctgg tgccgtcgtc ggtgacgggg cgcgtgcccg tgctggaaat cgccgccccc
     1561 gatgcgctgg cgctcagcgc ttgtctgcaa cgcggagatc caccggtgca cctgtccgag
     1621 cgccatgcgg tgcgcggcgt gctgacgctc gatccgcagg tcctgctgcc cgagcaggac
     1681 gcgccgctgg cggcggccat tcgcgccgcg ttggctagcg gttgagatcg agccagacct
     1741 cgatcgttcc gggcgaaggc ttgaccggga cgtttgcgac gtagagcacg ccgagcttct
     1801 tgtcgccgtt gaaggccgac agggtggtcg cgacctgttc ggcgacgggc ttgtcctccg
     1861 ggaagaaata gcgcgcttcg gccaagcctt tggcgctggc aatctgctct gacggcggcg
     1921 cctgcacgcc catggcgcgc aacgcgtcga tcaccgatcg gcgtttctcg gtcgggccga
     1981 catattgcag aaagacagtg ctgcaatagg tgcgcggcac cgtcacctgg gcccagatct
     2041 ggtctcccag cgagcggcgg taggttcgga tgtcgctgga cagcgtcacc tggccgccgg
     2101 ccggcaccag gccgacctgg cgcggcatga cgtagctttc gggaggccac tccgcgcgca
     2161 gccggatgtc cgcccgcgcg tcgaggacga cgctctcgcc gctcttcagg agggcagggt
     2221 cgctgtcgtt ggccaggcgg ctgtcggact tggaaccgaa ccacagatag ccggagcagg
     2281 ttgcaacgcc ggccgctgcc acctggagct gagggggcgc ggtccgctgc ggcggagcga
     2341 ccgttgcgtc cacctccttc tggacgggcg tcgcagcctg cagttgaagc cggctcactt
     2401 cgtaccggtt ggcgcccatg ctttccaggt agcgcttcag cgggtcgaga tcgtctcgcg
     2461 agagcgcatc gacggcggtt tgcactgttg cccggttgtg caggctatcg gtgctttgct
     2521 gcctggtcag ctccgtcgcc gcccgagcct cggctttcgc cacctgaacc tcggcctccg
     2581 ccacctgagc cttgcgatcg ccatcgacct tgaacaagta cgcgaggctg gcgagcgcga
     2641 cgaaagcgag aacgacgagt ccgcgcttga cccaggtcgt gaatcgctcg ctcttttcgc
     2701 tcgctgtgac cagggccttg atctcgggat cgcgatccat gaaaagcgag gcttcggcca
     2761 gcgccttgcc ggtcagaaga tagcctctct tgttgatttc atcggtcatc cgccattgac
     2821 gcgccagcgc cgagatacga acgatggccc tcgcctcggc gtcgctgggc ggtccggccg
     2881 gcgaggtcgc ggacggcgac ggcggcgatt gatccttcct ggcgtcggtg ctgcgcaggc
     2941 gatcagcgac ttgtttgaac atgccggtca tcactgaccg cagcacgggc tctgccacgc
     3001 ctgccaccgt cgcgccgatc ccgccgcctg ccgcgggggc gctggcggcg acggcatccg
     3061 ccggcggcga cggcgctgcc gcgtgcgttt ctggcgtttg cgggcggaat gcgtcgaggc
     3121 gcgggagggt accgcgctcc gcgtcaatga cggcctcttc gctgcaccag aagtagagga
     3181 ggttgcgcag gctgtcgcgc tccggcccgt cgggaacgac agcgcctgcc gcgacgatgt
     3241 cggtcacgag cgctcgagcg tcgttggccg acggcgatcc gctgacccat gacgcggcaa
     3301 gccggttgtg gcgctggttc agcgaggcga ccagagaagt cgctgtatcc gatagcggcg
     3361 tcatttgaag aactcgcatc ctggccgcac ccggtcgaga atgcccgtga gcggctgctg
     3421 aagcgcgagg agctgggaaa agtcgtcctt gagcgccctg tcggcgtcga ggaaagccga
     3481 gcgggcggcg ccgagcagtt cggcgaacgc cgcgcgaacg gcctccaggc tggccggcgc
     3541 ggcacctgcc ggcaatgggc cgtcggtgct gagaacgtgg ctccggatcg cagtgttcag
     3601 gcctccgatc gcgcggtcgc tggttgcgcc gtcgaacagg gcttcgagat agagagttgt
     3661 ccaggggacc cgatcgacga gttccccgag caggttatcg ggcggatgcg cgagaacctg
     3721 ctcgatttca tacaggccct ggtccgcagc ctgccaaagc gcatgctcca tcaatcgacg
     3781 gcgcagcgtg tcgccgaggt cgaacgcggc ctcgcgcacc ggcgcgtcct cgaacaacgt
     3841 gcagaagccg accagcggga actcgcgcga cacggagaac atcgccgcat cgatcagcgg
     3901 cggctcgcgc atcagcatct ggcgcagctt cgcacacgcg aacgcgatct cgtcggcctt
     3961 gccgccccgc agcagccgat cggcgtccag gctcgtcttg ctgcagcgtc cgcagctatc
     4021 accgatatcc gacggcagtt tgtccggggg cgccgtcgtc gtcttgatga cccgcgacag
     4081 ggcgagaatc agcgttgcca ccgttgcgtc gccgtcgcgc ttggccaggg cgtccagcca
     4141 cttcgcccct tcgacctgaa gcgagtgcag ggcatcgtgg atggacttga gcgctgcaaa
     4201 cagcttcagg gcatccacga ccttctgcag ctcgccgcgt tccttgcaca ggcgtgcgaa
     4261 cagggcaccg gccggcgtgc cgggtggcca gggcgagagc ttgtcctgca tcgccgtcag
     4321 tgcctcggtc agggtcttca cccaggtcgc gacgccgcgc ggcgggcgca ccagcgacgg
     4381 cagcttttcg ctgatgccga accgaacgtc ctcgagctgc caggcctgct ccatgatccg
     4441 aagcaggaga gaagtcggaa gatacgcctg ttcgagtctg agcttttgca ggagctgctg
     4501 gctcagcacg tccatgtcga cggaggtcag tgcgatccgg ttccatgacg gtgcgcccgg
     4561 gacacgtttc aatgcctcct tgcagtcgtc gggcgtgcag cgctccgcca cgatcttgcg
     4621 caacacctcg gagtcgtcgg gcgacaggct gagggtcatc ggcatgtgat gctcctagac
     4681 tcccaacagg gctttggcct cgttcttcgt ctcgatgctc ttgcggatga ggccgaccgg
     4741 cacgccctgg ttgtaggtcg gcggccccgc ggcaggatcg ccgaggtgat gcagagcaag
     4801 caagtcccac tccatgctga agcagggcga gccggacgag ccggcggcgg tgttggtgcg
     4861 gtagcgcagc cgcagcccgt catggaccgc accgatgacg gcgctggtgt ccatggcgaa
     4921 gcgcatcgga tcgccggcgg gatgctggac gatgatcagc ggatcgtcct tggccgaagg
     4981 cggcggatcg ctgagccgaa ggaagccccg ctccggcacc ggcgtcgcca gccgcagcag
     5041 cgcatagtcg agctggtcgg gcgtcggcgg cggagtgtcg ggttgcttcg tcagctcggc
     5101 gccgctgcaa cgccgctcat cggcgacagt cgtagcggca atcagggtgc cggcatcgac
     5161 gccgccgccc gtcaggcgcc gatagtcgaa gcggcagccg agcttggcca gcgcgccttg
     5221 ccggcgggct gcttccgcga cgtgccagtt cgtcaatatg gcgtcaggtc cgaccaggaa
     5281 gcccgtgccg atgcccgcac cgtcggcctc gacgcggcaa acctgccgct tgatggtctc
     5341 gatgcggctg agccagatct cgatgtcgag ggtcttgagg gccggcctga cattggcctc
     5401 gagcccgggt ccctcgctct ccggggcggt ggtggcgccc gccttctgga actcgaactt
     5461 gacggcttcg cgcgccgcct tcggcgcgat gtcgggatag agttccagga tgcaggcccg
     5521 caggtccgtc tgcagcggtt tctcgcggta gacgacgcgg aggaacctgt cggtgatggg
     5581 tcctttttcg agcttctcga tcagcttgtc gatggtgtcg taaagcgaca ttcccgtgcc
     5641 gacgaacttg ccgaacagcc gatctcccgt cccgagatag acgaacctct cgagctgatt
     5701 gaagtcgacg gcgacgtaca aaagctcgac gagcttggag gtttcctcgg cggacaggcg
     5761 cttcacgggc tgatacccag gactgagaaa tacaactcat aagagcacag ctcggcgcac
     5821 ttggaaagcg gccaagcatt gcctgttcga gcgtgtccgt ccgttgtcac agctgggctg
     5881 cgagccccag ggcgacccaa tccctgaatt cactcgaccg acgacgcgcc ctcgtcgcga
     5941 taggcccagc acatgtcggg cggcagggtg agggcgatct cgccgtcgtc gtggcgcgcc
     6001 gcggtgccca gttcgagggc ttccaggcgc tggccgccca ggtcgacgtc gtacaccgtc
     6061 tgcatgccct ggtagcggcg ctcgatcacc cggcccgaga aggcgttggc cgagccgcgt
     6121 tcgcccagcc gcacgttctc ggcccgcagc gccacgcgcg ccttgtcgcc ggggctgagc
     6181 ggctggggtg tccaggcctc gatgcgcccg gcggcgccga ggtcgatggt cgccctctcg
     6241 ccggtgcgcg tcagcacctt gcccaaaagc acgttggagg cgccggtgaa attggcgacg
     6301 aagggatcgg ccggccggtt atagatctcg gccggcggcg ccatctgcaa cagcttgccc
     6361 tcgcgcatca cgccgatgcg atcgcccagc acgacggctt cggattggtc gtgggtgacg
     6421 tagagcccgg tcatgccggt ctgcttcagg atacggcgca attcgtcgcg caggcggacg
     6481 cgcagcttgg cgtcgaggtt ggagagcggc tcgtcgagca gcaggagttg cgggcggtag
     6541 accaggctcc tcgccagcgc cacgcgctgc atctggccgc ccgacagcga cgtcaccgag
     6601 cgctcggcgt agtcgcccag cccgaccagg ctgagcgttt cgtcgacctt ggcgttgatg
     6661 tcgccgccgc tgccgttgcg ccgatgtttt agcggataag ccacgttctg gcgcaccgtc
     6721 atgtgcggcc acacggcata ggactggaac accatgccga tgtcgcgctc gcgcggcgac
     6781 accagcacgc cgcgttccgg ctccgacacc acgcgatcgc cgatcgagat gcgcccgccg
     6841 gtcggatgct cgagcccggc cacgcagcgc aaggtcgtgg tcttgccgca gcccgacggc
     6901 ccgagcaaaa ccacgatctc gcccgccggc acgtcgaagc ttacgtcgtc gacggcgggt
     6961 ttgcccgtcg caaaccgctt gaccaggtgc tcgatgagga gcgcgctgct cactggcggt
     7021 agccgtaggt cttgttccac tgctcgagcc acgactcgcg caacgattcg aactccttga
     7081 agttcggcac ccagaccttg atcaccttgg ggtcccagcc cttggggaag gaaggcggct
     7141 ccttcagcga agtgatgttg cccagcttgg cgatctggaa ggcctggccc tccttggaca
     7201 ggcgccagtt catgaacagc ttggcggcgt tgggactctt ggcggttttg ggaatgccgt
     7261 cggcataggg aatgatcggc acgccctcgg gcgcgaagat cgcctcggcc ggcgctccct
     7321 cgacgatctt cgtgtagatg atgttgtaga gcagcggcgc gatcgagatt tcgccgcgca
     7381 ccaccgcgtc ggacagcggc gcgccggacg ggtagaggcc gatgccgagc gccgcctgct
     7441 tctgccagta gtcctcgccc agcacctggc gctcgaacat gacgcgggtc caggtcgtgc
     7501 cgcccgacgg tccgacgacc tggccgatct gcttgccttt gtattcgggg ttcaacaggt
     7561 ccttccagct cttcggcgcg ttcttgacca gctgggtatt gtaggcgatc gcccagccga
     7621 gggtgacgcc gggccagaac ttgggcgaca ccagcgcgtc gggccgatag tcggcggcgt
     7681 tgggcggcgt gtaatcctgg aagaggtcgg ccagttcgag catcaggcca cggtcggaat
     7741 ggttgacgac gtcggcgccg agcttgccgg cggcggcctc ggtcttgatg cgggtgatga
     7801 gctggccgcc cggggcgcgc accatcgcca ccttcacctt ggggaagcgt ttgttgaatt
     7861 ccttgatgac ctcctgctcg gtctcggcga agttggcggt gtaataggtg agctggcctt
     7921 ccttttcggc cgcctcgatc agttccttcg agccgaattc gttctgcgcc agggccggca
     7981 gtccggccag cgccagcgcc aatccaatgg cggttgccaa ggtcatcgca tgcttcattg
     8041 gtagttcctc ctactatcgt ttcatcagtt gaagcgggcg ctttgagtcg tttcgcgcga
     8101 aagccaggtc gtgatgctga gcagcacggc gaggatcgcc gtctgcacca ggctgaaggc
     8161 ggcggtcttt ccggtgttgc cgccctcgta gtagtcgagc agcagcacgg ccatcaccgt
     8221 ggtatcgctg gtatagagaa agagcgagga tccgagctcg cggatcgcca gcacgaagag
     8281 cagcgtcatc gatgccacga cgccgggccg ggcgagtggc aggacgatcg tgcggatggt
     8341 gctgagcatt ccgcggccgg aaatccaggc cgcctcctcg agctccttgt ggatctgcag
     8401 gaacgaggtc gacagcgcct tcaccgtgtc gggcatgaag cgcgcgacaa aggccagcgc
     8461 caggatccag atcgtgccgt agagcccgcc gggcaggcct atccaggccc acagataggc
     8521 gacgccgatg accaggccgg gaatggcgac gggcagcgtg gctagaaggt cgatcgagcg
     8581 gcggccggcg acgcgggtgc ggttcaccgt atagccgatg gcgaaggcca acgcgccgcc
     8641 ggccagcgcc gtgatcacgc cgaccttcag cgtgttccag atcgacagca tggtgagcgg
     8701 attgtcgaag accgcgttga aatgcaccca gctgtactgc ttcatgtcga acagcgcgtc
     8761 gaaatccttg aagaacatga atttgcggaa ggcggcgatg accagcgcca gggtcggcag
     8821 cacgaccacg atcagcaggt aggcgatcgc caggcccaag gtgaaccagc gccacggacc
     8881 gagattgagg gcgcgcgggc ggaaggcctt gccggcgacg gtggcgaagc tcttgccgga
     8941 aagcacccgc tgctgggccc ataccaggat cgccgtcacc accatcagca ggatcgcgac
     9001 cgcggcggcg gtgttgtaga gcggcgggct ccaggccgtc agcttgaaga tgtaggtggt
     9061 cagcacgttg atgtcggccg gcgcgccgag cgccgccggc acgccataga tgcccagcat
     9121 caccacgaac gacagcagcg agccggccag gatggcgggc gcaatcagcg ggaaggtgac
     9181 ggtgaacagc gtggtgaagg cgctggcgcc cgccacttcc gacgcctcct cgaggctcgg
     9241 atccatgttc ttgagcgccg aggcggtgaa catgtagacg tagggcgcgt agtaaatgcc
     9301 gaatacgatg atgaggcccg acatcgagta gaagttgaag cggaaatcga tgctgagcca
     9361 tttcagcgcg gtgttgagca ggccggtctt gggcgaaccc aaaatgcccc aggcgacgcc
     9421 cgcgaccagc ggcggcacga acagcgggat caggctggca ccggcgatga aacccttgaa
     9481 cggcgtgttg gtgcgcacga cgatccacga gaaggcaagc ccgatcacga ccgccaggat
     9541 cgtgccgcca ccgcaggccg ccagcgcatt gaagaaggcg aggtggacgt tctcgttgcc
     9601 cagcacgtcg acgaagtgct tgaccgacgg cttgaagttg ccgaacccgt cgaccaccgg
     9661 attggaatcg ctcagcgccc cgaagatcag catcagcagc gggtagatca ccaggaaggc
     9721 cagcacgatc agcagcgcgc cgacccacag gggcgcggcc agccggcgcg gggctgccgc
     9781 ggcgttggtc gatgccggca gaacagcact cgtcgccgtc aacgctactc ctcctcccat
     9841 gcgtccgcgg cagtgccagc ggcttcttca tttggtgtgt aaccgtagcc catcgcgatt
     9901 tccgacgcta cgttttgctg atgaagctgc gtacccacga ccgctacgac tacgtgccgc
     9961 tcagcggtcg ccccgactat tcatggcccg gaggcaagaa gctcgccgtc tatttcgccc
    10021 tcaatctgga gcatttttcc ttcggcgagg gactgggcgc cgagctggcg cccggcggac
    10081 cgtcgcccga tgtgctcaat ttctcctggc gcgactacgg caaccgg
//
LOCUS       DASWGA010000382         6580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1053652, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000382 DASWGA010000000
VERSION     DASWGA010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6580
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1053652"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VF991_09210"
     CDS             <1..292
                     /locus_tag="VF991_09210"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEX9556659.1"
                     /translation="SAATGVLGRLRQSLGLDQLRVGSSGNSSGNSSGASSVGLEAGRY
                     VSPGVYVGAKQGAAGNSSRGVVEIDVLDHTKVEGDIGADSNGRVGVKMEWDY"
     gene            374..544
                     /locus_tag="VF991_09215"
     CDS             374..544
                     /locus_tag="VF991_09215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556660.1"
                     /translation="MTRILILAIALGAIASGCSYREEKTVVPATTMAVAPVPATVTYV
                     DPAPSSTVIYTR"
     gene            698..2056
                     /locus_tag="VF991_09220"
     CDS             698..2056
                     /locus_tag="VF991_09220"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX9556661.1"
                     /translation="MYRTIGTRGWAFLAAFSLAMPAVAQIQPIAIPARDFGPVWTGFY
                     VGAAFGAGGAVNKLESNTPALATTFDGGGGSGVLGSIYGGVDYQLTKRGVIGLLAEVS
                     YSGFQGGASAQVPGASANINMNTGLSWAALARAGVLANPTTLLYVAGGYAGQNVHTDG
                     FASGGGGASASFSNDQTVNGWTLGPGFETMFGRNWSGKLEYRYSQFGRTTLAGTNIGL
                     TPSNHAIRAGISYRFGGLGVASSDEPTPPGPTNVRWTGIYGGVAGGGGMGFGRVNAAA
                     GGASTGFDSGGQGLLGGFFGGADYQFSPYALVGVMGDFTWTGLQSTLSINAPGGGSAY
                     LSADANRQWSVMGRVGYLPVPATLLYAAGGFTQLNVHATASAVLPGGAMPFASSDTTF
                     NGFTVGPGIETVITGGWTTRLEYRFSQFEQKDLGVGVNMQPSNHTVRAGLSYKFGMGS
                     GT"
     gene            2125..2562
                     /locus_tag="VF991_09225"
     CDS             2125..2562
                     /locus_tag="VF991_09225"
                     /inference="COORDINATES: protein motif:HMM:NF021435.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2141 domain-containing protein"
                     /protein_id="HEX9556662.1"
                     /translation="MSKLGVAVAFSVALGGIIAEAQQANTISVAVSGLRNNNGNVRCG
                     LYNSAATFPKNGQEFQGVVAPIANQQATCTFANVPPGTYAVALFQAEKGETALPTGFF
                     GQPLVAYGFSRNATGTMGPPAFNAAAYSYAGGATSWPVTITYP"
     gene            complement(2575..2895)
                     /locus_tag="VF991_09230"
     CDS             complement(2575..2895)
                     /locus_tag="VF991_09230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556663.1"
                     /translation="MRGGLMQYLGVMRGSGVLACGEEEMGRADYDIDGFLTRPGEVVG
                     SGEIRMSPEALNNAFGRQALRLTTDDGRVLEVRFSGKRLDPASDAAHADITGQLPGPS
                     EWRR"
     gene            complement(2895..3905)
                     /locus_tag="VF991_09235"
     CDS             complement(2895..3905)
                     /locus_tag="VF991_09235"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEX9556664.1"
                     /translation="MTVSHGGLDAAVRQTAASFARPNGWQSALQLVTSFGPFLAGCAA
                     MYLVLPLSYLGALALAVPTGALLVRVFIIQHDCGHGSFFASRRLNTMVGRACSLFTLT
                     PYANWSRQHSLHHADWNNLDRGGGGSDIYSACRTVRDYLALPRWRRFLYRLPRHPLIA
                     NVLLPPLIFVLLYRLPFDTPPGWTRERRSVHLTNAALACLFGTLIALLGWRQVLLVHL
                     PVMIVASILGVWLFSLQHRFETAHWTEKGEWTFVEAALDGASWFDLPRALHWLTGNIG
                     FHHVHHLNPRVPNYRLGKAHKAVQALRPVPPLSLWRGLAATLLTLWDERRGCLVRFRD
                     AV"
     gene            4155..4367
                     /locus_tag="VF991_09240"
     CDS             4155..4367
                     /locus_tag="VF991_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX9556665.1"
                     /translation="MTTGTVKWFNSQKGFGFIQPDNGGSDAFVHISAVERAGLGTLSE
                     GQKIEFDLVADRRSGKMSADNLKKVG"
     gene            complement(4482..4682)
                     /locus_tag="VF991_09245"
     CDS             complement(4482..4682)
                     /locus_tag="VF991_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HEX9556666.1"
                     /translation="MAKYSRSAGKDVKSAMKRRKKGTLKSGKGGKGGTVKSRKQAIAI
                     GLSEARKKGKKVPKRKSPSKSK"
     gene            complement(4771..5628)
                     /locus_tag="VF991_09250"
     CDS             complement(4771..5628)
                     /locus_tag="VF991_09250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556667.1"
                     /translation="MFQLLFDARHTVLMSRFHGTYVEADICVRDKAAARFVARHGLAR
                     GIMDFSAVEAVDVPMGYILERAHAPPVLPGQARVIVAPREPAYSLNRIVAAHQLYSRK
                     VEPLLVGTLEEAYRALAITDPAFEPLEDDTAAQLETIALGVVAAIDQACAASGDEHRR
                     MRQKMLRLLDRALTGKPAARHAPAGTTITLSDVLNAVLRRVTLSDADLAANCARCRLT
                     TPLSACRVEAGRETTYACPSCRSTLATLASASRASAEPARGYVLGSFLVCTDVDIECP
                     GGLLPRSRL"
     gene            complement(5695..6261)
                     /locus_tag="VF991_09255"
     CDS             complement(5695..6261)
                     /locus_tag="VF991_09255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556668.1"
                     /translation="MILARPILALLVAASSLVGCAQSGVIGGADYAPQYDYGEFFAVT
                     DGRNFQVIVSGNPFPGLIEAEMKRRLLPVMQANKPRPNLTFTYQAPPERPHPDYRMVL
                     VFNAANDLTAARVCAGEVWHKPAAARPFDLFAVYCRDDLALSQTTAWTMANGPDDPAV
                     GQLFAQLFLVLFSDMPPRRFRPRPFMRW"
     gene            complement(6299..>6580)
                     /locus_tag="VF991_09260"
     CDS             complement(6299..>6580)
                     /locus_tag="VF991_09260"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9556669.1"
                     /translation="GMDIQEAIEQPRFASFSFPNSFAPYTHLPGRLNLEDRLPAATLD
                     ELRRRGHDVEMWPAFTRRACSVEAILLDSRTGFLRAGADFRQPAYAMVN"
BASE COUNT         1125 a         2144 c         2231 g         1080 t
ORIGIN      
        1 ctcggccgcc accggcgtac tcggccgtct gcgacagagt ttgggactcg accaattgag
       61 ggtcggatcg tcaggcaact catcgggcaa ctcatcgggc gcctcgtcgg tggggctcga
      121 ggccgggcgc tacgtgtctc ccggtgtcta tgtcggcgcc aagcagggcg cggccggcaa
      181 ctccagccgc ggggtggtcg agatcgacgt gctggaccac accaaggtcg agggcgatat
      241 cggcgccgat tccaacggcc gggttggggt caagatggag tgggactact agccattgcg
      301 atcgcaaccc cccaccgcag cctcccgtta tttccatgcg gtatccatta ccgcggccaa
      361 ggaggcccga cccatgacgc gcattctcat tctggcgatc gcgcttggcg ccatcgcttc
      421 cggctgcagc tacagggaag agaagaccgt ggtgcctgcc accacaatgg ctgtcgcccc
      481 ggtgccggca acggtcacct atgtcgaccc ggcgccgtct tcgacggtca tttacacccg
      541 ctaaaaagta cacccgctaa aaatgtcgcc cggccgcgat ctggttcccc aggtcgcggc
      601 cgtcacgaat ctaggtataa cagtcacata ggcgattaac gctcactaaa actgtaaatt
      661 aggttctcaa cccattgaaa atatgataca ttaaggaatg tatcggacga taggcacccg
      721 cggctgggcg ttccttgccg ccttttcatt ggcgatgccg gctgtggcgc agatccagcc
      781 gatcgccatt cccgccagag atttcggtcc ggtctggacc ggtttctatg tcggcgcagc
      841 ctttggcgcg ggcggtgcgg tcaacaagct cgaatcgaac acgcccgctc ttgccaccac
      901 gttcgacggt ggcggcggca gcggtgttct gggctcgatc tacggcggcg tcgactacca
      961 gctcaccaag cgcggcgtca tcggcttgct ggccgaggtc agctactcgg gcttccaggg
     1021 aggggcatcg gcccaggtgc cgggcgccag tgccaacatc aacatgaata ccggcttgag
     1081 ctgggcggcg ttggcgcggg cgggcgtgct cgccaatccg acgaccctgc tttacgtggc
     1141 cggcggttat gccggccaga acgtccatac cgatggcttc gccagcggcg ggggcggggc
     1201 gtcggcgagc ttctccaacg accagaccgt gaatggctgg accctcggtc cgggcttcga
     1261 gaccatgttc ggacgcaatt ggtcgggcaa gctcgagtat cgctacagcc agttcggccg
     1321 caccacgctg gccggcacca atatcggcct gacgccgtcc aaccacgcca tccgcgccgg
     1381 tatcagctac cgcttcggcg ggctgggtgt cgcgtcctcc gacgagccga cgccgccggg
     1441 gccgaccaac gtcagatgga ccggcatcta tggcggcgtc gcgggcggcg gcggtatggg
     1501 cttcggcagg gtcaatgcag cggcgggtgg cgcttcgacc ggcttcgaca gcggtggcca
     1561 aggcctgctg ggtggcttct tcggcggtgc cgactatcag ttctcgccct atgccctggt
     1621 cggcgtgatg ggcgacttca cctggacggg tctccagtcc accctcagca tcaacgcgcc
     1681 cggcggcggc agcgcctacc tgtcggccga cgccaatcgc cagtggagcg tgatgggccg
     1741 cgtcggctat ctgccggtgc cggcgactct gctctatgcc gcgggcggct tcacccagct
     1801 caacgtccac gcgaccgcga gcgcggtgct gccgggcggc gccatgccgt tcgcctcgag
     1861 cgacacgacg ttcaacggct tcacggtcgg gccgggcatc gagacggtga tcaccggcgg
     1921 ctggacgacc cggttggagt atcgcttcag ccagttcgag cagaaggatc tcggcgtcgg
     1981 cgtcaacatg cagccgtcga atcacaccgt ccgcgccggg ctgtcgtata aatttggcat
     2041 gggctctggc acttagaccg cgcacacggc aaactggcgc ccttcaatcc ggggggattg
     2101 attagggggc aaggatcaat gcatttgagc aaacttggag tcgcggtcgc tttttcggtc
     2161 gcgcttggcg gcatcatcgc tgaagcccag caggccaaca ccatctccgt ggcggtgagc
     2221 ggcctgcgca acaacaacgg caatgtgcgc tgcggcctgt acaactccgc cgcgaccttt
     2281 cccaagaacg gccaggagtt ccagggcgtg gtcgcgccga tcgccaatca gcaagcgacc
     2341 tgcaccttcg ccaacgtgcc gcccgggacc tacgccgtgg ccctgttcca ggccgagaag
     2401 ggcgagacag cgcttccgac aggcttcttc ggccagcccc tggtggctta cggcttctcg
     2461 cgcaacgcga cgggcacgat gggcccgccg gccttcaacg ccgccgccta tagctatgcg
     2521 ggcggcgcga cgagctggcc ggtgaccatt acctatccct aaacagccac cgatctagcg
     2581 ccgccactcc gatggcccgg gcagttgccc ggtgatatcg gcgtgcgcgg cgtcgctggc
     2641 cggatcgagt cgcttgccgg agaagcgcac ttcgaggacg cggccgtcat cggtcgtgag
     2701 ccgcagcgcc tggcggccga aggcgttgtt caacgcctcg ggcgacatgc ggatttcgcc
     2761 cgaacccacg acttcgcccg ggcgggtgag gaagccgtcg atgtcgtagt cggcgcggcc
     2821 catctcttcc tcgccgcagg ccagcacgcc gctgccgcgc atcaccccga gatattgcat
     2881 caagccccct cgcatcagac ggcatcccgg aagcgcacca gacatccgcg ccgctcgtcc
     2941 cacagcgtca gcaacgtcgc ggcgaggccg cgccacaagc tgagcggcgg caccgggcgg
     3001 agcgcctgca cggccttgtg ggccttgccc aggcgatagt tcggcacgcg cggattgaga
     3061 tggtggacgt ggtggaagcc gatattgccg gtcagccaat gcagcgctcg cggcaggtcg
     3121 aaccacgacg cgccatcgag cgccgcctcg acgaacgtcc actcgccctt ttctgtccag
     3181 tgcgcggttt cgaagcggtg ctgcagcgag aacagccaga cgcccaggat cgacgccacg
     3241 atcatgaccg gcaggtggac cagtaggacc tgccgccagc cgagcagcgc gatcagcgtg
     3301 ccgaacagac aggccaaggc cgcattggtg agatggaccg accggcgctc gcgcgtccag
     3361 ccgggcggcg tatcgaacgg caggcgatag agcagcacaa aaatcagcgg cggcagaagc
     3421 acgttggcga tcaagggatg gcgcggcagg cggtagagaa agcggcgcca gcgcggcagc
     3481 gccagatagt cgcgcaccgt gcggcaggcc gagtagatgt cgctgccgcc gccgccgcgg
     3541 tcgagattgt tccagtcggc gtgatgcagg ctgtgctggc ggctccagtt ggcgtagggc
     3601 gtgagggtga acaagctgca agcccgtccc accatggtat tgaggcgccg cgaggcaaaa
     3661 aacgagccgt gtccgcaatc gtgctggatg atgaacacgc gcaccagcag ggcgccggtc
     3721 ggcacggcca gcgccagcgc gccgagatag gacaacggca gcacgagata catcgccgca
     3781 cagccggcga ggaagggacc gaacgacgtg acgagctgca atgcgctctg ccatccgttg
     3841 ggccgcgcga agctggccgc ggtctgtcgc accgcggcgt cgagtccgcc gtggctgact
     3901 gtcatgtcct attcctgggt tgtggccgca ccctctacat gggcattcgg ccggcccggt
     3961 gcaatggact tgccaagccg gccggcaagg tccataggag cggcgtcgat ggacggacga
     4021 tgatttggct cgtgctctaa acagagccac accagtgaac ttgatcccga aaacaagtgc
     4081 gaattcgaca gtccgccacg cccgcgaagg acgatggctg gaccagcata tctacgttta
     4141 agaaagggtc tcccatgacg acgggaaccg tgaaatggtt caacagccag aagggcttcg
     4201 gattcatcca gcccgataat ggcggcagcg atgccttcgt gcacatcagc gccgtggagc
     4261 gcgccggcct cggcacgctg agcgaaggcc agaagatcga gttcgatctg gttgccgatc
     4321 gcagaagcgg caagatgtcg gctgacaatc tcaagaaggt cggctgatcg catcggcgcc
     4381 gccggctagc cggcggcgca agcaactggg ccccgcgcct cgaccaggcg gcggggcctt
     4441 tgcttttttt cgccgtggtt ggcgccgaat cgatttcggc gctacttcga tttgctgggg
     4501 cttttgcgtt tcggcacctt cttgcctttc ttgcgcgctt cggacaggcc gatcgcgatc
     4561 gcctgcttgc ggctcttcac cgtgccgccc ttgccgcctt tgccgctttt cagcgtgcct
     4621 ttcttgcgcc gcttcatggc gcttttcacg tccttgccgg cgctgcggga atatttggcc
     4681 atggatcctc cgagatagcc ttctcgggca acgcgccttg cacgcggcgg atgcatcggc
     4741 aaaagccgcc tgacgttaca agcgggaccg ttacaagcgg gaccttggca gaaggccgcc
     4801 cggacattcg atgtcgacgt cggtgcagac gaggaaggag ccgagcacgt aaccgcgcgc
     4861 cggctcggcc gacgcccggc tggccgacgc gagcgtggcc agggtgctgc ggcagctcgg
     4921 gcaggcatag gtcgtctcgc ggccggcttc aactcggcag gcgctgagcg gggtcgtgag
     4981 ccggcagcgg gcgcaattcg ccgcaagatc ggcgtcgctc agcgtgacgc ggcgcagcac
     5041 ggcgttcagc acgtcgctca gcgtgatcgt cgtgccggcc ggcgcgtggc gcgctgccgg
     5101 cttgcccgtc agcgccctgt cgagcagccg cagcatcttc tgccgcatcc tgcggtgttc
     5161 atcgccgctc gccgcgcagg cctggtcgat cgccgcgacc acgcccagcg caatcgtctc
     5221 gagctgcgcg gccgtgtcgt cctcgagcgg ctcgaaggcg gggtcggtga tcgccagcgc
     5281 ccgataggcc tcctcgagcg tgccgaccag cagcggttcg accttgcggc tgtagagctg
     5341 gtgggcggca acgatgcggt tgaggctgta ggccggctcg cgcggcgcca cgatcacacg
     5401 cgcctggccg ggcaggaccg gcggcgcgtg ggcgcgctcg agaatgtagc ccatcgggac
     5461 gtcgaccgcc tcgacggccg agaaatccat gatgccgcgc gccagcccat ggcgggcgac
     5521 gaagcgcgcc gcggccttgt cgcgcacgca gatgtcggcc tcgacatacg tgccgtgaaa
     5581 gcgcgacatc aggacggtgt gacgggcgtc gaacagaagc tggaacacca agtctccccg
     5641 aggacaacct atcggtgtcg cgagcttgcc tcgggatcgg cgccgggtcc atcgctacca
     5701 gcgcatgaac ggccgcggtc gaaagcgccg cggcggcata tcgctgaaca ggaccaggaa
     5761 gagctgggcg aacagctgac cgacggcggg gtcgtcggga ccgttcgcca tggtccacgc
     5821 ggtggtttgt gacaacgcta ggtcatcgcg gcagtagacg gcgaacaggt cgaacggccg
     5881 ggccgcggcg ggcttgtgcc agacctcgcc ggcgcagacc cgcgcggccg tcagatcgtt
     5941 ggcggcattg aacaccagca ccatgcgata gtccggatgc ggcctctcgg gcggcgcctg
     6001 gtaggtgaag gtgaggttgg gccgcggctt gttggcctgc atgaccggca gcaggcggcg
     6061 cttcatctcg gcctcgatca ggccaggaaa gggattgccc gacacgatca cctggaagtt
     6121 ccggccgtcg gtcaccgcga agaattcgcc gtaatcgtac tgcggcgcat agtcggcgcc
     6181 tccgatgacg ccgctctggg cacagccgac gaggcttgaa gcggccacca gcagggcgag
     6241 gatcggccgg gccaggatca cgtcacgaca acggtgccgg cctcgcttgc gttgccgctc
     6301 agttcaccat ggcataggcc ggttggcgga aatcggcgcc ggcgcgcaag aagcccgtcc
     6361 ggctgtcgag caggatcgcc tcgaccgagc aggcgcggcg ggtgaaagcg ggccacatct
     6421 cgacgtcgtg gccgcggcgg cgcagctcgt cgagcgtagc cgccggcagg cggtcctcca
     6481 ggttcaggcg gccgggcagg tgggtgtagg gcgcgaagga gttggggaag ctgaagctgg
     6541 cgaagcgcgg ctgctcgatc gcctcctgga tgtccatgcc
//
LOCUS       DASWGA010000383         1552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_551603, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000383 DASWGA010000000
VERSION     DASWGA010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_551603"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..1042
                     /locus_tag="VF991_09265"
     CDS             149..1042
                     /locus_tag="VF991_09265"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9556670.1"
                     /translation="MTIRFDNRVAIVTGAGNGLGRAHALLLASRGAKVVVNDPGGAVD
                     GKGGDHAAADKVVAEIKAAGGQAVPNYDSVAEPASAANIVKTAVDSFGTVDIVVNNAG
                     VLRDKTFHNMTIEDFDFVVKVHFLGTAYVTHAAWPIMRAKAYGRVVVTSSNSGIYGNF
                     GQANYGGAKLAVVGFMNALRLEGQKYNVLVNALAPVAGTRMTESLLSPEMLGKLDPSF
                     VSPMVAYLCSEQCQRTGEIWSAGAGNFARIEYREAPGLRIPGRPPTIEDVADNIDKIA
                     DLSTNKVFRTSSEEVAAVVGS"
     gene            1144..>1552
                     /locus_tag="VF991_09270"
     CDS             1144..>1552
                     /locus_tag="VF991_09270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556671.1"
                     /translation="MNRVLQAGIPVWRTYIGLQLIHPQLQAIGYMWRRGEKVQQIARA
                     YGIQFTPAYIGSPMQEAREQGRAVRYRLTDLTEHHHALLHELKADGGVDYYALPMRIR
                     REGPLPIVTFATDSRSGFSDEDIADLSTNKVFRT"
BASE COUNT          279 a          527 c          501 g          245 t
ORIGIN      
        1 gatgtccttg tcggccatcc gcaagctcgc aagcaactgg gactttccaa cggacattct
       61 cgtgcagcgt cgacaagggt tgaaacgaca gcgcggcgaa caaacataag cggctcgaca
      121 agcacaagac ctcaggggag accggggaat gaccatccgt ttcgacaacc gcgtcgccat
      181 cgtcaccggc gccggcaacg ggttgggccg cgcgcatgcg ctgctgttgg ccagccgcgg
      241 cgccaaagtg gtggtgaacg atcccggcgg cgccgtcgac ggcaagggcg gcgaccatgc
      301 ggcggccgac aaggtggtgg ccgagatcaa ggcagccggc ggccaggcag tgccgaacta
      361 cgattcggtc gccgagccgg cgagcgccgc caacatcgtc aagacggcgg tcgattcgtt
      421 cggcaccgtc gacatcgtgg tgaacaacgc gggcgtgctg cgcgacaaga ccttccacaa
      481 catgacgatc gaggatttcg acttcgtcgt gaaggtgcat ttcctcggca ccgcctatgt
      541 cacccacgcc gcctggccga tcatgcgcgc caaggcctac ggccgggtcg tcgtgacctc
      601 gtcgaactcc ggcatctacg gcaatttcgg ccaggccaac tatggcggcg ccaagctcgc
      661 cgtggtgggc ttcatgaatg cgctgcgcct cgaaggccag aagtacaacg tcctggtcaa
      721 tgcactggcg ccggttgccg gcacgcgcat gaccgaaagc ctgctctcgc ccgagatgct
      781 gggcaagctc gatccttcgt tcgtgtcgcc gatggtggcc tatctctgca gcgagcagtg
      841 ccagcgcacc ggcgagatct ggagcgccgg cgcgggcaat ttcgcgcgca tcgaatatcg
      901 cgaggcgccg ggcctgcgca tcccgggccg cccgcccacc atcgaggacg tggccgacaa
      961 tatcgacaag atcgccgacc tctcgaccaa caaggtcttc cggacctcgt cggaggaggt
     1021 ggcggcggtg gtcggctcct gaacgccggg atctccgccg gcgaccgcct ggcatcggtc
     1081 gccgactggc tggcgcgcga gggccgcctc gtgcccgcgc cgtcggcctt cgtcgagcaa
     1141 gtgatgaacc gcgtcctgca ggccggcatc ccggtgtggc gcacctatat cggcctgcag
     1201 ctcatccacc cgcaactgca ggcgatcggc tatatgtggc ggcgcggcga gaaggtgcag
     1261 cagatcgccc gcgcctatgg catccagttc accccggcct atatcggcag cccgatgcag
     1321 gaagcgcgcg agcaaggccg ggcggtgcgt taccgcctga ccgatctcac cgagcaccac
     1381 cacgctctgc tgcacgaatt gaaggccgac ggcggcgtcg actactatgc gctgcccatg
     1441 cgcatccgcc gcgaggggcc gctgccgatc gttacttttg ccaccgacag ccggtcgggc
     1501 ttctccgacg aggatatcgc cgacctctcg accaacaagg tcttccggac ct
//
LOCUS       DASWGA010000384         4274 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1566326, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000384 DASWGA010000000
VERSION     DASWGA010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4274
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1566326"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VF991_09275"
     CDS             complement(<1..582)
                     /locus_tag="VF991_09275"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9556672.1"
                     /translation="MTIAPPATIAFIGLGMMGRPMAARLAGAGYKLRLFDISQKAVSD
                     FVGAHPSALATASPKAAAQGADALITMLPDGKVVRQALIEGRDAAREGLAAGSLVLDM
                     SSSNPVDTQKLARDLAAAGSALLDAPVSGGVKRAIDGSLSIMVGGAAADLERARPALA
                     AMGKTITLCGAAGAGHAMKALNNYVSAAGLVAAA"
     gene            complement(579..1052)
                     /locus_tag="VF991_09280"
     CDS             complement(579..1052)
                     /locus_tag="VF991_09280"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9556673.1"
                     /translation="MVSIRTARTGEGESLSALCVRSKAHWGYDAAFMAKSAAALSVSE
                     ADIAAGRVLVAVDGASRTIGVAGVVPQGGTADLDLMFVDPPAIGRGAGRMLFEAAASL
                     ARRLGARRLTILADPNAAAFYERMGARFLRNAPSDAIPGRTLPLYEYDLMSGTIS"
     gene            complement(1162..1578)
                     /gene="pcaC"
                     /locus_tag="VF991_09285"
     CDS             complement(1162..1578)
                     /gene="pcaC"
                     /locus_tag="VF991_09285"
                     /EC_number="4.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047575 - 4-carboxymuconolactone
                     decarboxylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-carboxymuconolactone decarboxylase"
                     /protein_id="HEX9556674.1"
                     /translation="MAKAKAAKAKPNPRNKKLYDDGMKVRKAVLGADYVDNSMAGADD
                     FMMSFQDITTEYAWGYVWTRPGLPKKTRSMLNLAMLAALNRAPELKLHVNGALNNGLT
                     KEEIKEVFLQVAIYCGIPASLDAFKTARDVFKERGV"
     gene            complement(1616..2074)
                     /locus_tag="VF991_09290"
     CDS             complement(1616..2074)
                     /locus_tag="VF991_09290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX9556675.1"
                     /translation="MPRLSKKTMFAIEAVLDVAFHVGEHPVRSGDITERQRIPKRYLE
                     QVLQHLVRAGILSGKRGPRGGYRLGREQRRITLGEVVRVVRKLEAETEPNDPAIGSPL
                     AHEVVWPMWDKLRDDMMAQLDNITIEDLCQRARAKGLNVTASRQTDHLAV"
     gene            complement(2089..2568)
                     /gene="dut"
                     /locus_tag="VF991_09295"
     CDS             complement(2089..2568)
                     /gene="dut"
                     /locus_tag="VF991_09295"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008550447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEX9556676.1"
                     /translation="MGVESIEIEVVRLAHARDLELPAYASAAAAGADLVAAIDHDIEL
                     GPLERRIVPTGISIALPVGFEAQVRPRSGLVAKHGVTVANAPGTIDADYRGEIGVILI
                     NLGREPFRISRGMRIAQLVVARHARAVWREASELDRTARGAGGFGSTGVTAGSAKNA"
     gene            complement(2568..3794)
                     /gene="coaBC"
                     /locus_tag="VF991_09300"
     CDS             complement(2568..3794)
                     /gene="coaBC"
                     /locus_tag="VF991_09300"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEX9556677.1"
                     /translation="MLNGKRILLIVAGGIAAFKSLELIRRLRERGAAVRCVLTDAGSR
                     FVTPLSLQALSEDRVFSDMFSLTDESEMGHIELSREADLLVVAPATANLLARMAAGMA
                     DDLAATVLLATDKPVLAAPAMNVRMWTHAATVANVETLKKRGVSFVGPNDGAMACNEY
                     GPGRMSEPEEIVVAIEAMLTAEQPLAGKRAVVTSGPTREAIDPVRYISNHSSGKQGHA
                     IAAALARLGADVTLVSGPVALADPTGLRTVHVDSADQMLAACLAAGTIDIAVCAAAVA
                     DWKAARPAAAKIKKKTGAPPPALELAPNPDILATLSKPGPKRPALVVGFAAETEDLVA
                     NAIDKRKRKGCDWIVANDVSAATGTFGGDRNTVHLISASGVEDWPTLAKGDVAMRLAG
                     RIALHFGRPTKAEAAE"
     gene            complement(3808..>4274)
                     /locus_tag="VF991_09305"
     CDS             complement(3808..>4274)
                     /locus_tag="VF991_09305"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9556678.1"
                     /translation="RTTPQWAFLVLASILVIYSGLGLLRIRLHIHADLERPLAPVIGV
                     VSGFIAGLVGVPVVPLMPYLQGLDIKPTELVQTLGVVLCATSITLTVSLLYFGLLDGP
                     RALVSAAAVVPALAGMWMGQQIRLRLSIEQFRLAVFWALLLTGVYTFASRLL"
BASE COUNT          689 a         1448 c         1460 g          677 t
ORIGIN      
        1 ggccgccgcg accaggcccg ccgccgagac atagttgttg agtgccttca tcgcatggcc
       61 ggcgccggca gcgccgcaca gcgtgatggt cttgcccatg gcggcaaggg ccggccgcgc
      121 gcgttcgaga tcggctgcgg cgccaccgac catgatgctg agcgagccgt cgatggcgcg
      181 cttgacgccg cccgacaccg gggcatcgag cagtgccgag cccgcggcgg cgagatcgcg
      241 cgccagcttc tgggtgtcga cgggattgga cgagctcatg tcgagcacca gcgatcccgc
      301 cgccagcccc tcgcgcgcgg catcgcgacc ctcgatcaac gcctgccgca ccaccttgcc
      361 gtcgggcagc atggtgatca gcgcatcggc gccttgcgcg gcggccttgg gcgaggccgt
      421 cgccagggcc gacggatggg caccgacgaa atccgagacg gccttctgcg agatatcgaa
      481 caggcgcagt ttatagcccg ccccggcgag tcgcgccgcc atcggccggc ccatcatgcc
      541 gagaccgatg aaagcgatgg tggcgggagg agcgatggtc atgaaatggt ccccgacatc
      601 aggtcatatt catagagcgg caaggtgcgg ccgggaatgg cgtcggacgg tgcgttccgc
      661 agaaagcgcg cgcccatgcg ctcatagaag gcagcggcgt tggggtcggc gaggatggtg
      721 agccgccgcg ccccgagccg gcgggccagg ctggccgcag cctcgaacag catgcggccc
      781 gcaccgcggc cgatggcagg cggatcgacg aacatgaggt cgagatcggc ggtcccgcct
      841 tgcggcacga caccggccac gccgatcgtc cggctcgcac cgtcgacagc gaccaggacg
      901 cgaccggcgg cgatgtcggc ctcgctcacg ctcagcgccg cggcgctctt cgccatgaag
      961 gctgcgtcat aaccccaatg cgccttcgac cgcacgcaca gcgcgctgag actctcgcct
     1021 tcgccggtcc gtgcggttcg aatggaaacc atcgcgtcat cacttgtcat cctgagcgca
     1081 gcgaaggatc tcatggcctg gcaagcggag atcaggtggc agccggcgat gaggtccttc
     1141 gctacgctca ggacgacagc cctagactcc gcgttccttg aagacgtcgc gtgcggtctt
     1201 gaaggcgtcg aggctggccg ggatgccgca atagatggcg acctgcagga agacctcctt
     1261 gatctcctcc ttggtgagcc cgttgttcag cgcgccgttg acgtgcagct tgagttcggg
     1321 cgcgcggttc agcgccgcca gcatggcgag gttcagcatc gagcgcgtct tcttgggcag
     1381 gcccggccgc gtccacacat agccccacgc atattccgtg gtgatgtcct ggaacgacat
     1441 catgaagtcg tcggcgcccg ccatcgaatt gtcgacatag tcggcgccca gcacggcttt
     1501 gcgcaccttc atgccgtcgt cgtagagctt cttgttgcgt gggttgggct tggctttcgc
     1561 cgccttggcc ttggccatct gtcgttcctc cggtcaatgg gaccagagaa ttctatcaga
     1621 ccgcgagatg gtcggtctgc cggctcgccg tgacgttgag ccccttggcg cgggcgcgct
     1681 ggcaaaggtc ctcgatggtg atgttgtcga gctgggccat catgtcgtcg cgcagcttat
     1741 cccacatcgg ccacaccacc tcgtgggcga gcggcgagcc gatcgccgga tcgttgggct
     1801 cggtctcggc ctcgagcttg cgcaccaccc gcacgacctc gcccagggtg atgcggcgct
     1861 gctcgcggcc cagacggtag ccgccgcgcg ggcccctctt gccgctcagg atgccggcgc
     1921 gcaccagatg ctgcaggacc tgttcgagat agcgcttggg gatgcgctgg cgttcggtga
     1981 tgtcgccgct gcgcaccggg tgctcgccga cgtggaaggc cacgtcgagc acggcttcaa
     2041 tggcgaacat ggtctttttg ctgagccgag gcatccccgt gctttccctc aggcgttttt
     2101 tgccgacccg gccgtcactc ccgtcgatcc gaaacccccg gcaccacgcg ccgtccggtc
     2161 gagctcactc gcctcacgcc acactgccct tgcatgccgg gcaaccacca actgtgcaat
     2221 tcgcatgccg cggctgatgc gaaacggctc ccggccgaga ttgatcagga tcacgccgat
     2281 ttcgccgcgg tagtcggcat cgatggtgcc gggggcattg gccaccgtca cgccatgctt
     2341 ggccaccagc cctgaacgcg gccggacctg ggcctcgaaa ccgacgggca gggcgatcga
     2401 aatgccggtc ggaacgatgc ggcgttccag cgggccgagc tcgatgtcgt gatcgatcgc
     2461 cgccacaagg tcggcgccgg cggcggcggc gctggcatag gcgggaagct cgaggtcgcg
     2521 cgcatgggcc agccgcacca cctcgatctc gatgctttcc acccctatca ctccgccgcc
     2581 tcggccttgg tggggcggcc gaaatgaagc gcgatgcggc cggcgagccg cattgcgaca
     2641 tcgcccttgg ccagggtcgg ccagtcctcg acgcccgagg cgctgatcag gtgcacggtg
     2701 ttgcgatccc cgccaaacgt gccggtcgcg gccgacacgt cgttggccac gatccaatcg
     2761 catcccttgc gcttgcgctt gtcgatggcg ttggcgacca ggtcctcggt ctcggcggca
     2821 aagcccacga ccagcgccgg acgtttgggg ccgggcttgg acagggtggc cagtatgtcg
     2881 ggattgggcg cgagttcgag agcgggcggc ggcgcgccgg tctttttctt gatcttggcc
     2941 gcggcgggcc gcgccgcctt ccagtcggcg accgcggccg cacagaccgc gatgtcgatc
     3001 gtccccgcag cgaggcaggc ggcgagcatc tggtcggccg agtcgacatg gacggtgcgc
     3061 aggcccgtcg gatcggcgag cgccaccgga ccgctcacca gggtgacgtc ggcgccgagc
     3121 cgcgccaggg cggcagcgat cgcatggcct tgcttgccgg aggaatgatt ggagatatag
     3181 cggacgggat cgatcgcctc gcgcgtcggg cccgatgtca caacggcgcg cttaccggca
     3241 agcggctgct cggccgtcag cattgcctcg atggcgacga cgatctcctc cggctccgac
     3301 atgcggccgg gaccatattc gttgcaggcc atggcgccgt cgttggggcc gacgaacgag
     3361 acaccgcgct tcttcagcgt ctcgacattg gcgaccgtcg cggcgtgggt ccacatgcgc
     3421 acgttcatcg ccggcgcggc cagcaccggc ttgtcggtgg cgagcagcac ggtggccgcc
     3481 agatcgtcgg ccatgcccgc cgccatgcgc gccagcagat tggcggtggc cggcgccacg
     3541 accagcaggt cggcctcgcg cgacagctcg atgtggccca tctcgctctc gtcggtcagc
     3601 gagaacatgt cgctgaagac gcgatcctcg ctcagcgcct gcagcgacag cggcgtcacg
     3661 aaccgcgacc ccgcgtcggt gagcacgcag cgcaccgcgg cgccgcgctc gcgcagccgg
     3721 cggatgagtt cgagggattt gaaggccgct atgccgcccg cgacgatcag caggatccgc
     3781 ttgccgttca acatggcggc cagattatca caacaaccgg ctggcgaaag tgtagacgcc
     3841 cgtcagcaaa agcgcccaga acacggccag gcggaactgc tcgatcgaca ggcgcaggcg
     3901 gatctgctgg cccatccaca tgccggcgag cgccggcacc accgccgccg ccgacacgag
     3961 ggcgcgcggt ccgtcgagca ggccgaaata gagcagcgag acggtgaggg tgatcgaggt
     4021 ggcgcaaagc acgacgccca gggtttgcac cagctctgtc ggcttgatgt cgagcccctg
     4081 caggtaaggc atcagcggca cgacgggcac accgaccagt ccggcgatga agccggaaac
     4141 aacgccgatc acgggagcca gcggcctttc gagatcggcg tggatgtgca gccggatgcg
     4201 cagcaggccg aggccgctat agatcacgag gatgctggcc aggaccagga acgcccattg
     4261 cggcgtcgtc cgtc
//
LOCUS       DASWGA010000385         1678 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1054314, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000385 DASWGA010000000
VERSION     DASWGA010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1054314"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..123)
                     /locus_tag="VF991_09310"
     CDS             complement(1..123)
                     /locus_tag="VF991_09310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556679.1"
                     /translation="MIKLTWLASWKAYSVRRDGRVIGLVRCSVPLPFRRVVEFT"
     gene            369..527
                     /locus_tag="VF991_09315"
     CDS             369..527
                     /locus_tag="VF991_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556680.1"
                     /translation="MGMKRKRRTTLLELVQDLQRRTSSEAELVRRVRRLVNSGAVVLT
                     GNFAGQRF"
     gene            complement(631..1020)
                     /locus_tag="VF991_09320"
     CDS             complement(631..1020)
                     /locus_tag="VF991_09320"
                     /inference="COORDINATES: protein motif:HMM:NF019459.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1634 domain-containing protein"
                     /protein_id="HEX9556681.1"
                     /translation="MANARSGWTDQQVEQMIGSLLWAGLMIATAVVVVGAALYLFRHG
                     GELPNYRAFRGEPADLRSIGGILRDSLQERGRGLIQLGLVLLLATPVARVAFSVIAFA
                     LQRDWFYVTVTLIVLAVLLYSIVGGYV"
     gene            complement(1023..>1678)
                     /locus_tag="VF991_09325"
     CDS             complement(1023..>1678)
                     /locus_tag="VF991_09325"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9556682.1"
                     /translation="AASAYVRDGYSNLRVGMFLEVATTVGAVAGAMLAAYISASSIAV
                     IFGLVLLVSAYLSFRKRQDPNGDDPPDSLATWLRMDSTYPTSAGRRAYHVHGVPPAFG
                     VMFIAGTLSGLLGIGSGAVKVLALDWAMRLPFKVSTTTSNFMIGVTAAASAGVYLNRG
                     YIDPGLAMPVMLGVLIGSLAGARVLENVQSTALRVVFAAVIVVLGVEMIYNGLSGKL"
BASE COUNT          345 a          547 c          531 g          255 t
ORIGIN      
        1 tcaagtgaat tcgaccacac ggcgaaacgg cagcggcacc gaacagcgca cgaggccgat
       61 cacacgtccg tcgcgcctta ccgaataggc cttccagctc gcgagccatg tcagcttgat
      121 catttcgttg tccctccgag ctgcttgtgt ggcacccctc gtgccacgac tatgccctgg
      181 ctgttgccta cttctacggc cgaggacgcg gggtgtcgcg gggaggcgca ccagcagccg
      241 ccgccctgtc ggcaaacacg cccatatggt ggcacggtcg aaacgcccgc gttcgcggca
      301 tgttcggacg ccaaaggtat gtgctcagcg ccgagcacga tggcaccggc acgtaggatg
      361 ctcccttcat gggcatgaag cgaaaacgaa gaacgacgct gctggaactg gtgcaagacc
      421 tgcagcgccg caccagcagc gaagcagagc tggtgcgccg cgtgcgccgg ctggtgaata
      481 gcggcgccgt ggtgctgaca ggtaacttcg ccgggcagcg cttttgaccc ctacgcggcg
      541 tttgcgtgag gggaaaggcg ataatatgcc cgcagagttg ccgcggagga tccggacgcg
      601 gccaccggcg actgcgctgc ttgcccacgc tcacacgtat ccgccgacga tgctgtagag
      661 caggacggca aggacgatga gcgtcaccgt gacgtagaac caatcgcgct gcagcgcgaa
      721 ggcaataacc gagaaggcaa cccgggccac gggagtggca aggagcagca cgaggccgag
      781 ctggatcagg ccgcggccgc gttcctgtaa gctatcgcgc aggattccgc cgatgctgcg
      841 caggtctgcc ggttcgccgc gaaaggcgcg ataattcggc agttcaccac catggcggaa
      901 caaatagagc gcggccccca ccacgaccac ggccgtggcg atcatgaggc cagcccacag
      961 caagctcccg atcatctgct cgacttgctg gtccgtccac cctgaccgtg cgttcgccat
     1021 ctctagagct tgccgctcag gccgttgtaa atcatctcga cgcctaagac gacgatgacc
     1081 gccgcgaaga ccacgcgtaa tgccgtgctc tgcacattct cgagcacgcg cgcgccggca
     1141 agcgaaccga tcaagacacc gagcatcacc ggcatcgcga gacccggatc gatgtacccg
     1201 cggttgaggt agacgccggc gctggcggcg gcagtgacac cgatcatgaa gttgctggtg
     1261 gtggtggaga ccttgaaggg cagccgcatc gcccagtcga gcgccaacac cttcaccgct
     1321 cccgagccga tgccgagcaa gcccgacaac gtccccgcaa tgaacatcac accgaaggct
     1381 ggcggaacgc cgtgcacgtg ataggcccgc cggccggcgg atgtggggta ggtgctgtcc
     1441 atgcgcaacc atgtggccag cgaatcgggt ggatcatccc cgttcgggtc ctgccgcttt
     1501 cgaaacgaga ggtacgcgga gaccaacaag accaggccga agatcaccgc gatgctggag
     1561 gcggagatgt atgcagccaa catcgcaccg gccacagcgc cgactgtggt tgccacttcc
     1621 aagaacatcc cgactcgcag gttgctgtag ccgtcgcgga cgtacgccga cgccgcgc
//
LOCUS       DASWGA010000386         2181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1054330, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000386 DASWGA010000000
VERSION     DASWGA010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1054330"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..1453
                     /gene="cysS"
                     /locus_tag="VF991_09330"
     CDS             122..1453
                     /gene="cysS"
                     /locus_tag="VF991_09330"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX9556683.1"
                     /translation="MSLVIYNTLSREKEPFAPLDAGHVRLYVCGPTVYDYVHIGNARP
                     VVAFDVLYRLLKRRYRRVTYVRNITDIDDRIMVRAADNGETIEALTTRTADAYQGDMR
                     RLGALVPDVEPRATQYVGEMIAMIGRLVDKGHAYAAEGHVLFSVPSMSDYGRLSRRTR
                     DELIAGARVEVAPYKKDPADFVLWKPSTDEQPGWPSPWGRGRPGWHIECSAMSAKHLG
                     ETFDIHGGGLDLIFPHHENEIAQSRSAFGHAIMAKYWMHNGFLNISGEKMSKSLGNFF
                     TVHELLDQYPAEAIRLLLLSAHYRQPLDFTHDGLQQAKATLDRWYGALRGRDAAPANS
                     VPQVVEDALSDDLNTPLAISAIHQIGDPASLRAGGQALGLLQQDAEAWFRWTPAGASG
                     PSDAEIEAAIANRQAARKAKDFKESDRIRDELKAKGVILEDGPTGTTWKRG"
     gene            complement(1541..>2181)
                     /locus_tag="VF991_09335"
     CDS             complement(1541..>2181)
                     /locus_tag="VF991_09335"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556684.1"
                     /translation="RGHAGSDKPADGYDFDSLAADLAAVLDQRDLSDVTLVGHSMGAG
                     EVARYLARYGSKRVARTVLVAPTTPFALKTIDNPDGTDRAVYDKLVAALEANPPAYLA
                     AGAPGFFGRGAEPELVEWGLSIALQASVPALVKCLRAFSETDFRPDMRAFTMPTLIVY
                     GTADMPSTARNAERTAAAIPGSRLEAYEGAPHGLFLTDPARFNRDLLGFARS"
BASE COUNT          373 a          728 c          755 g          325 t
ORIGIN      
        1 gataaactac cgaaatgtcg ctccttctat tccccggcgc ggtttctgcg cgatgtaact
       61 aagttcgcgc ccgtttacgg gcgatcgggc ttcgtacaat gctgatcggg gagtagggac
      121 catgtccctc gtcatctaca atacgctgtc gcgcgaaaaa gagccattcg caccgctcga
      181 tgcagggcac gtgcgcctgt atgtctgcgg gcccaccgtc tacgactacg tccatatcgg
      241 caatgcgcgg cccgtcgtcg cgttcgacgt gctctaccgc ctgctcaagc ggcgctatcg
      301 gcgcgtcacc tacgtgcgca acatcaccga catcgacgat cgcatcatgg tgcgcgcggc
      361 cgacaacggc gagaccatcg aggcgctgac cacgcgtacc gccgacgcct atcaaggcga
      421 catgcgccgc ctgggcgcgc tggtgcccga cgtcgagccg cgcgccacgc agtatgtcgg
      481 cgagatgatc gccatgatcg ggcgcctggt cgacaaaggc cacgcctatg cggccgaggg
      541 ccacgtgttg ttcagcgtgc ccagcatgag cgactacggc cgcctgtcgc ggcgcacgcg
      601 cgacgagctg atcgccggcg cgcgggtcga ggtcgcgccc tacaagaagg acccggccga
      661 cttcgtgctg tggaagccgt cgaccgacga gcaaccgggc tggccgagcc cgtggggccg
      721 cggccggccg ggctggcaca tcgagtgctc ggcgatgagc gccaagcatc tcggcgagac
      781 cttcgacatc catggcggcg ggctcgacct catcttcccg caccacgaga acgagatcgc
      841 gcaaagccgc agcgccttcg gccacgccat catggcgaag tactggatgc ataacggctt
      901 cttgaacatc tccggcgaga agatgagcaa gtcgctgggc aacttcttca ccgtgcacga
      961 gcttttggac cagtatccgg ccgaggcgat ccgcctgctg ctgctgtcgg cgcactaccg
     1021 ccagccgctc gacttcacgc atgacgggct gcagcaggcg aaggcgacgc tggaccgctg
     1081 gtacggcgcg ctgcgcggcc gggatgccgc cccggccaat tcggtgccgc aagtggtcga
     1141 ggatgcgctg tcggacgacc tcaacacgcc gctcgccatc agcgccatcc accagatcgg
     1201 cgatccggcg tcgttgcggg ccggcggcca ggcgcttggc ctgttgcagc aggacgccga
     1261 agcgtggttc cgctggaccc cggccggagc gtcgggtccg agcgacgccg agatcgaagc
     1321 cgcgatcgcc aaccgtcagg cggcgcgcaa ggccaaggac ttcaaggagt ccgaccgcat
     1381 tcgtgacgag ctcaaggcca agggcgtgat cctcgaggac ggaccgacag gcacgacctg
     1441 gaagcggggc taggctgggg gcgcgccact ccagtggcgc gatcttgtca agccgcgaag
     1501 aagaagaagc cgcgccactg gagtggcgcg cccccagcgg tcagctccgg gcgaagccca
     1561 gcaggtcgcg gttgaagcgg gccgggtcgg tcaggaagag gccgtgcggc gcgccttcgt
     1621 aagcctcgag ccggctgccg ggaatcgccg ccgcggtgcg ctcagcgttg cgggcggtcg
     1681 aaggcatgtc ggcggtgccg tagacgatca gggtcggcat ggtgaaggcg cgcatgtcgg
     1741 ggcggaagtc ggtctcgctg aaagcgcgca ggcacttcac cagcgctggc accgaggcct
     1801 gcagcgcgat cgacaggccc cattcgacca gctcgggttc ggcgccgcga ccgaagaagc
     1861 ccggcgcgcc cgcggccaaa taagccggcg gattggcttc cagcgccgcc accagcttgt
     1921 cgtagacggc gcggtcggtg ccgtcgggat tgtcgatggt cttgagcgcg aaaggcgtcg
     1981 tcggtgcgac gagaaccgtg cgtgcgacac gcttgctgcc gtagcgcgcc aaatagcgcg
     2041 cgacctcgcc cgcgcccatc gaatggccga ccagggtgac gtcgctgagg tcgcgctggt
     2101 cgagcacggc ggcgaggtcg gccgccaggc tgtcgaagtc atagccgtcc gccggcttgt
     2161 cggagccggc atggccgcgc c
//
LOCUS       DASWGA010000387         2206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1948278, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000387 DASWGA010000000
VERSION     DASWGA010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1948278"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VF991_09340"
     CDS             <1..304
                     /locus_tag="VF991_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HEX9556685.1"
                     /translation="ILRALHRAEAPAPSNYRTTWPWRTFARADAKPMPAGEPQLLRFA
                     LLPTAWRFSAGSRLRLSIAGGDADHFVQTPHGRPPLLTLLSGGERASVLELPTSEA"
     gene            504..1073
                     /locus_tag="VF991_09345"
     CDS             504..1073
                     /locus_tag="VF991_09345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556686.1"
                     /translation="MRSPIWFVVAGLIALAGFAGAVLYVMPRLAAFDAAMMRVVVPGD
                     AVLVLDKPGSYTIYHEKKSTVDGRYYASDAVNGLALALTSEATGAPVKLAVPSTEKSY
                     TVGNRSGTSIYAFTIDQPGRYRLAATLAGGRSDPKAVLAVDHGMFGAMIGTIFGTIAI
                     AFAGLGVAGAIVVAVLWQRSKAAKPVATG"
     gene            1129..2103
                     /locus_tag="VF991_09350"
     CDS             1129..2103
                     /locus_tag="VF991_09350"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9556687.1"
                     /translation="MNISRRTALGGLLAAGAAGPLRAADWRPSRAMDWIVPFPPGGSN
                     DIFARPVAAHVGQRLGQPVIVDNRGGAGGTIGGMVAARAQPDGSTLLVVNPSLTFAAI
                     VYPDSGFDLMRDFAAISSIARVPVALVINPNKVDAKDVAGFLAAARQSPGAINIGSSG
                     LGTIPHLAIELLQQRTGIKLTHVPYRGGGPALQDLLAGQIDATFAPLSTVASYVQSGR
                     LRALGVATAQREAVLPDVPTFAQAGVPDFEVSTWYGLFAPKATPDGPLDVLHAAIQAA
                     LVEPDIKRIWAEQGAQVDLQTRAAFGDFVRQEVERWSRIAKAVNIPME"
BASE COUNT          317 a          788 c          757 g          344 t
ORIGIN      
        1 catcctgcgc gccctccatc gcgccgaggc gccggcgccc agcaactacc gcacgacctg
       61 gccgtggcgg acgtttgcgc gcgccgatgc caagccgatg ccggccggcg aaccgcagct
      121 cctgcgcttc gccctgctgc cgacggcgtg gcgcttctcg gccggcagcc gcctccggct
      181 ctctatcgcc ggcggcgacg ccgaccactt cgtgcagacg ccgcatggcc ggccgccgct
      241 cttgaccttg ctgagcggcg gcgaacgcgc gagcgtgctg gaattgccga cgagtgaagc
      301 atgagccctc tccgcccgcg aagcgggggg agagggaggg gacccgcgcg tagcgcgggg
      361 agggtgaggt gggtcatcgt atgtatgacc acccatctcc tcggtaagaa acaccacctc
      421 accctcccat tgcttcgcaa tgggccccac cctctccccc gcttcgcggc ggagagggac
      481 tctgagcacg agggaggcag gcgatgcgca gcccgatctg gttcgtcgtc gcgggattga
      541 tcgcgctcgc gggtttcgcc ggcgccgtgt tgtacgtgat gccgcggctc gcggcgttcg
      601 acgctgcgat gatgcgcgtc gtggtgccgg gcgatgccgt gctggtgctc gacaagcccg
      661 gctcctacac gatctatcac gagaagaaga gcacggtgga cggccgctac tatgcctccg
      721 acgccgtcaa cgggctggcg ctcgcgctca catcggaggc gaccggtgcg ccggtgaagc
      781 ttgccgtgcc ctcgaccgag aagagttaca cggtcggcaa ccgcagcggc acgtcgatct
      841 atgccttcac catcgaccag ccgggccgct accggctcgc ggcgacgctg gcgggcggcc
      901 gcagcgatcc caaagccgtg ctggcggtcg accacggcat gttcggcgcc atgatcggca
      961 cgatcttcgg caccatcgcc atcgccttcg ccgggctggg cgtggccggc gccatcgtgg
     1021 ttgccgtttt gtggcagcgc tcgaaagcgg ccaagccggt ggcgaccggc tgagcccatc
     1081 gttaagttgg cggacagggg agcatcagcc gacatgatcc atctctcgat gaacatttcc
     1141 cgtcgcaccg cgctcggtgg gctgctggcg gcaggagcgg ccggtccgct gcgcgccgcc
     1201 gactggcggc cgtcgcgcgc catggactgg atcgtgccgt tcccgcccgg cgggtcgaac
     1261 gacatcttcg cgcggccggt ggcggcgcat gtcggccagc gcctgggcca acccgtcatc
     1321 gtcgacaacc gcggcggcgc cggcggcacc atcggcggca tggtggcggc gcgcgcccag
     1381 cccgacggct cgaccttgct ggtggtcaat cccagcctca ccttcgctgc catcgtctat
     1441 cccgattcgg gcttcgacct gatgcgcgac ttcgccgcca tctcctcgat cgcccgggtg
     1501 ccggtggcgc tggtgatcaa ccccaacaag gtcgacgcca aggacgtcgc gggcttcctg
     1561 gcggcggcgc gccagtcgcc gggcgcgatc aacatcggct cgtcgggact cggcaccatt
     1621 ccccatctgg cgatcgagct tttgcagcag cgcaccggca taaaactcac ccacgtgccc
     1681 tatcgcggcg gcgggccggc gctgcaggac ttgctggcgg gccagatcga cgccaccttc
     1741 gcgccgctca gcaccgttgc cagctacgtg cagtccggcc gcctgcgcgc gctgggcgtg
     1801 gcgacggccc agcgcgaagc cgtcctgccc gacgtgccga ccttcgccca ggccggcgtg
     1861 cccgacttcg aggtcagcac ctggtacggc ctgttcgcgc ccaaggcgac gcccgacgga
     1921 ccgctcgatg tgctgcacgc cgcgatccag gcggcgctgg tcgagccgga catcaagcgc
     1981 atctgggccg aacagggcgc gcaggtcgat ctgcagaccc gcgccgcgtt cggcgatttc
     2041 gtgcgacaag aggtcgagcg ctggagccgg attgccaagg ccgtcaatat tccgatggag
     2101 taggggctgg gagcgcgagc ctcgcggccc gctcatggct gggagcgcgc cactccgtgg
     2161 cgcatcttcg ttgacgacat aacccatgag cgccacggag tggcgc
//
LOCUS       DASWGA010000388         4190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1309693, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000388 DASWGA010000000
VERSION     DASWGA010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4190
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1309693"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..795)
                     /locus_tag="VF991_09355"
     CDS             complement(<1..795)
                     /locus_tag="VF991_09355"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase domain-containing protein"
                     /protein_id="HEX9556688.1"
                     /translation="MSKPRIHILALGGTIATRPDASGAMQMGLGADDLVAAVPLLGKI
                     ADIQAETVSRVGSHSLSFDQIHALAAKIKSLKADGVIVTQGTDTLEETAFLLDLLLDL
                     DIPMIVTAAMRNPALTSPDGPGNLLAAVRVACDPWVRAHARALGVIAVMLDEVYAASD
                     VLKVHPTRLNAFAAPQTVPLAALVEDRVVPMALPVRNAIEGARKKLGNAAGTAQPVAL
                     FWMSLDDSGGVIEAMLGARDHLGYRGAVLAAMGGGHIPERMVEAAGR"
     gene            complement(792..1325)
                     /locus_tag="VF991_09360"
     CDS             complement(792..1325)
                     /locus_tag="VF991_09360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556689.1"
                     /translation="MRLVRRGFVALPLAMAAGAATAQAQQTIWFAVRGADHSFIVDMP
                     GEPVYKLIDTVSPGGTPFVYHSYSLDYRRLAFVAQTALYPADVDVRQPRLNLQSVLDD
                     RARRLAGGKWTKIDWREVQGAPAADSVGPVPGGSVLRQLVLLKGRRTISLAYLAPADA
                     LRTPEAERFFQSLRLVA"
     gene            complement(1322..3019)
                     /locus_tag="VF991_09365"
     CDS             complement(1322..3019)
                     /locus_tag="VF991_09365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX9556690.1"
                     /translation="MSNLDPVTLTVIQNGLIQVCNEMDLAFVRSAFSPVISEGMDRSD
                     GIYDAIDGSLIAQGELGLPVFVGTMQFSSRAVIDRVKSHYAGKVDPGDVFIVNDPYLG
                     GTHLMDVRFVKPFFYKGELFAWLANTGHWPDVGGMVPGGFSASATEVEQEGLRLPPIK
                     FWKKGEMDQEILSIILSNIRIADQRIGDIKAQAAALTTGEVRLTALIDRYGADVVRQA
                     IAEMRHRAERQMRAKIAAIPDGVYEGTSQIDSDGVVDEPLTIKMKITKKGEELLFDMT
                     GSSPPCRGPMNSVIATTKSAIYLAIKHIFPEVPINAGTFEPLKIVEPEGTFLYAHYPR
                     PVSGCAAEVSQRIAEAVFAALTKAIPDLLFAAPAGTSGNLGVGGYDPERDRSYIMYLF
                     TGGGYGGFQGGDGLSNGCSTIGISKMPPVEVLEQFYPVLFEEFSLREGSGGAGEFRGG
                     FGINYAIKLRRGEARVSMVMDHGRTGPQGVLGGKDGGTNTVEVSQAGKIYRPPHLSKD
                     QDIQIGVGDVVRVSTPGGGGFGDPARRKPEAIARDVSRGYYGEAEAREKFGKRQAAE"
     gene            3101..>4190
                     /locus_tag="VF991_09370"
     CDS             3101..>4190
                     /locus_tag="VF991_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9556691.1"
                     /translation="MNAPFAADKLDSMKFGIGQPVPRQEDPTLLQGQGRYTDDLNLPN
                     QAHAVMVRSQVAHGILKSIDAEEAKKMPGVLGVWTGADLNEAGYGPLKTLIPVPNRDG
                     SPMKTPTRRSLATDKVRFVGDPVAFVVAETLAEAKDAAEAVLVDIEALPAVTEAREAA
                     KPGAPIVFDEAPGNICLDYQYGDSAKVADAFAKAAHVTRLRLISNRIVVCAMEPRSAI
                     GHYDAASDRYTLHAGCQGVFGLKHQMADLLQIKPAQMRVLTGNVGGSFGMKGSPFPEY
                     AGLFHASKLLGRPVKWTDERSGSFLSDQHGRDHDFDSELALDKDGRFLAVRLTGFANV
                     GGYLANVGPLMGSMGVTRNLAAIYRTPLI"
BASE COUNT          723 a         1386 c         1388 g          693 t
ORIGIN      
        1 acgtcccgcg gcctcgacca tgcgttcggg aatgtggccg ccgcccatcg cggccagcac
       61 cgcgccgcga taaccgagat gatcgcgcgc gccgagcatc gcctcgatca cgccgcccga
      121 gtcgtcgagg ctcatccaga acagcgccac gggctgcgcc gtgccggccg cgttgccgag
      181 ctttttgcgc gcgccctcga tcgcattgcg caccggcagg gccatgggca cgacacgatc
      241 ttcgaccagg gcggcgagcg gtacggtctg cggcgcggcg aaagcgttga gccgcgtcgg
      301 atggaccttc agcacgtcgg acgcggcata gacctcgtcc agcatcaccg cgatgacgcc
      361 gagcgcgcgt gcatgcgcgc gcacccacgg gtcgcaggcc acgcgcacgg cggccaaaag
      421 attgcccggg ccgtcgggcg aggtgagcgc gggattgcgc atcgccgccg tcacgatcat
      481 cgggatatcg agatcgagca gcaggtcgag caggaaggct gtctcctcca gcgtgtcggt
      541 gccttgggtc acgatcacgc cgtcggcctt cagcgacttg atcttggcgg caagcgcgtg
      601 gatctggtcg aaggagagcg aatggctgcc cacccgggat acggtctcgg cctggatgtc
      661 ggcgatcttg ccgagcaacg gcaccgccgc caccagatcg tcggcgccca ggcccatttg
      721 catggcgccg ctcgcatcgg gccgcgtggc gatggtgccg cccagcgcca ggatatgaat
      781 acgcggtttg ctcatgcgac gagcctcaag gattggaaaa agcgctcggc ttcgggcgtg
      841 cgcagcgcgt cggccggcgc gaggtaggca agcgagatgg tgcggcgccc cttcagcagc
      901 acgagctggc gcaacacgct gccgcccgga accggcccga ccgagtcggc agccggcgcg
      961 ccctgcacct cgcgccagtc gatcttggtc catttgccgc cggcgagacg gcgcgcgcgg
     1021 tcgtcgagca cggactggag attgagccgg ggctggcgca catcgacatc ggcggggtag
     1081 agcgcggtct gggccacgaa ggccagccgg cggtagtcga gactgtagga gtgatagacg
     1141 aacggcgtgc cgccgggcga caccgtgtcg atcagcttgt agaccggctc gcccggcata
     1201 tcgacgatga acgaatggtc ggcgccgcgc acggcgaacc agatggtttg ctgggcctgc
     1261 gctgtcgcgg cgcccgccgc catcgccaac ggcagggcga cgaaccctcg cctgacaagt
     1321 ctcattccgc cgcttgccgc ttgccgaact tctcgcgcgc ctcggcctcg ccgtagtagc
     1381 cgcgcgacac gtcgcgcgcg atcgcctcgg gtttgcgcct ggccggatcg ccgaagccgc
     1441 cgccgcccgg cgtcgacacc cgcaccacgt cgccgacgcc gatctggatg tcctggtcct
     1501 tggaaagatg cggcggccta tagatcttgc cggcctggct cacttccacg gtgttggtgc
     1561 cgccatcctt gccgcctaaa acaccctgcg ggccggtgcg gccgtgatcc atcaccatcg
     1621 agacgcgcgc ctcgccgcgc ctgagcttga ttgcatagtt gatgccgaag ccgccgcgga
     1681 actcgccggc gccgcccgag ccttcgcgca gggagaattc ctcgaacagc acggggtaga
     1741 actgctccag cacttcgacc ggtggcatct tggagatgcc gatggtcgaa cagccgtttg
     1801 aaagcccatc gccgccctgg aagccgccgt acccgccgcc ggtgaagaga tacatgatgt
     1861 agctgcgatc gcgctcggga tcatagccgc cgaccccgag attgcccgac gtgccggcgg
     1921 gcgccgcgaa cagcagatcg ggaatcgcct tggtgagtgc cgcaaacacc gcctcggcga
     1981 tgcgctggct cacttcggcg gcgcaaccgg acaccggccg cggatagtgg gcgtagagga
     2041 acgtgccctc gggttcgacg atcttgagcg gctcgaacgt gccggcgttg atcggcacct
     2101 cggggaagat gtgcttgatg gccaggtaga tcgccgactt ggtggtggcg atgacgctgt
     2161 tcatcgggcc gcggcagggc gggctcgaac ccgtcatgtc gaacagaagc tcctcgccct
     2221 tcttggtgat cttcattttg atggtgagcg gctcgtcgac cacgccgtcg ctgtcgattt
     2281 gcgaggtgcc ctcgtagacg ccgtcgggga tggccgcgat cttggcccgc atctggcgct
     2341 cggcgcggtg gcgcatctcg gcgatcgcct ggcgcaccac gtcggcgcca tagcggtcga
     2401 tcagagccgt cagtcggacc tcgccggtgg tgagcgcggc ggcctgcgcc ttgatgtcgc
     2461 cgatgcgctg gtcggcgatg cggatgttgc tgaggatgat cgacaggatc tcctgatcca
     2521 tttcgccctt cttccagaat ttgatcggcg gcaggcgcag gccttcctgc tcgacttccg
     2581 tggcgctggc ggaaaagccg cccggcacca tgccgccgac atcaggccag tgtccggtat
     2641 tggccagcca agcaaagagt tcgcccttgt agaagaaggg ttttacgaag cgcacgtcca
     2701 tcagatgcgt gccgccgaga tagggatcgt tgacgatgaa aacgtcgccg ggatcgactt
     2761 tgccggcata gtgcgacttc acgcgatcga tcaccgcccg gctggagaat tgcatggtgc
     2821 cgacaaatac cggcaagccg agctcgccct gggcgatcag cgaaccgtcg atggcgtcgt
     2881 agatgccgtc cgaacggtcc atgccttcgg agatcaccgg cgaaaaggcg gaacgcacga
     2941 aagccaagtc catttcgtta cagacctgga tcaggccgtt ctggatgacg gtaagcgtga
     3001 cgggatcgag attggacatg gcagcaatga ctagcacagc ccccgcttct ctgcgctatg
     3061 atcgaaccct atttcccacc ctattcagag caggatgccc atgaacgcgc cattcgccgc
     3121 ggacaagctc gattcgatga aattcggcat cggccagccg gtgccacgac aggaagaccc
     3181 gaccctgctg cagggccaag gccgttacac cgacgatctc aacctgccga accaggccca
     3241 cgcggtgatg gtccgcagcc aggtcgcgca tggcatcctc aagagcatcg acgccgaaga
     3301 ggccaagaaa atgccgggcg tgctgggcgt gtggaccggc gccgacttga atgaagcggg
     3361 ttacggtccg ctgaaaaccc tgatcccggt gcccaaccgc gacggctcgc cgatgaagac
     3421 gccgacgcgt cgctcgctcg ccaccgacaa ggtgcgtttc gtcggcgatc cggtggcctt
     3481 cgtcgtcgcc gagacgctgg ccgaagccaa ggatgccgcc gaggccgtcc tggtcgatat
     3541 cgaggcgctg cccgcggtca ccgaggcgcg cgaagccgcc aagcccggcg cgccgatcgt
     3601 gttcgacgag gcgcccggca atatctgcct cgactatcag tacggcgaca gcgccaaggt
     3661 ggccgatgcc ttcgccaagg ccgcccacgt cacgcggctg cggctgatca gcaaccgcat
     3721 cgtcgtctgc gccatggagc cgcgatcggc gatcggtcat tacgatgccg ccagcgatcg
     3781 ctacacgctg catgccggct gccagggcgt gttcgggcta aaacaccaga tggccgattt
     3841 gctgcagatc aagccggcac agatgcgcgt gctgaccggc aatgtcggcg gttcgttcgg
     3901 catgaagggc tcgcccttcc cggaatatgc cggcctgttc catgcttcca agcttttggg
     3961 ccggccggtg aaatggaccg acgaacggtc gggcagcttt ttgagcgacc agcatggccg
     4021 tgaccacgat ttcgacagcg agctggcgct cgacaaggac ggcaggttcc tcgccgtgcg
     4081 cctgaccggc ttcgccaatg tcggtggcta cctcgccaac gttgggccgc tgatgggctc
     4141 gatgggcgtc acccgcaacc tcgccgccat ctaccgtacg ccgctgatcg
//
LOCUS       DASWGA010000389         2128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1430560, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000389 DASWGA010000000
VERSION     DASWGA010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430560"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1826
                     /locus_tag="VF991_09375"
     CDS             <1..1826
                     /locus_tag="VF991_09375"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556692.1"
                     /translation="QETPLFAEQVKSGALPPAAKRVPQPPWVVKTFAGGDGPGRQGGQ
                     LNMLVAGARDTRLMTVYSYTRLIVYDDKFKLHPDILESYEAKEGREFTLKLRAGHKWS
                     DGQPFTTEDFRFFWEDVANNKELSPSGPSVELLVDGQPPKVEIIDERTIKYSWDKPNP
                     YFIESQARAAPLFLFRPAHYLKKFHARYTDAAEIAKSSRGGQQGSWIQIYRRLDVMYA
                     NDNIDLPSLNPWVLTTPPPAQRYVFVRNPYYHRIDEKGQQLPYIDRIIFTQAAANLVP
                     AKAGLGEADLQPRYLNMRDYTFLQKSAKNSGVDVRLWESGSGSQIALYPNLNVNDEDW
                     RKLFRDARFRRALSLAIDRDEMNQVVYIGLAKPSNNTIMERSELFKPEYATKWAQYDL
                     KRANKLLDEIGLTKRDAQGIRLLPDGRPATIVVENQSEETEDSDALQLITDYWKKIGI
                     KMLVKPQTKENFRLRTFSGEALMTAFAGVVTAVPTPETSPKEFAPTMQGGLQWPKWGM
                     FVESKGKQGEKCDMEDACKLLDYVKEWEHATNSAERRKAWDKILQTNADEVFSIGTVN
                     GIRQPIVVGPKVRNVPKEGYYAWDPGGYIGLYQPDTFWIAP"
     gene            complement(1955..2107)
                     /locus_tag="VF991_09380"
     CDS             complement(1955..2107)
                     /locus_tag="VF991_09380"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556693.1"
                     /translation="MDMILHGANPADLPIKGATQFTLSVNRSALTTLGLALPSDISVR
                     VNDWRS"
BASE COUNT          433 a          715 c          645 g          335 t
ORIGIN      
        1 tgcaggaaac cccgctgttc gccgaacagg tgaagtcggg cgccctgccg ccggccgcca
       61 agcgcgtccc gcagccgcct tgggtggtca agaccttcgc cggtggcgac ggtcccggcc
      121 ggcagggcgg ccagctcaac atgctggtgg caggcgcgcg cgataccaga ctgatgacgg
      181 tctacagcta cacgcggctg atcgtgtacg acgacaagtt caagctccat cccgacatcc
      241 tcgagagcta cgaggccaag gagggccgtg agttcaccct gaagctgcgc gccggccaca
      301 aatggtcgga cggccagccc ttcaccaccg aggatttccg cttcttctgg gaggacgtcg
      361 ccaacaacaa ggagctctcg ccgtccggcc cgtcggtcga gcttttggtc gacggccagc
      421 cgcccaaggt cgagatcatc gacgagcgca ccatcaagta cagctgggac aagcccaatc
      481 cctacttcat cgagagccag gcgcgcgccg ccccgctctt cctgttccgg ccggcgcatt
      541 acctgaagaa gttccacgcc cgctacaccg acgccgcgga aatcgccaag tcctcgcgcg
      601 gcggccagca aggcagctgg atccagatct accgccgcct cgacgtgatg tacgccaacg
      661 acaatatcga cctgccgtcg ctcaacccgt gggtcctcac cacgcccccg ccggcccagc
      721 gctacgtctt cgtgcgcaat ccctactatc accgcatcga cgagaagggg cagcagcttc
      781 cctatatcga ccgcatcatc ttcacccagg cggcagccaa tctcgtgccg gccaaggccg
      841 ggttgggcga ggccgacctg cagccgcgct acctcaacat gcgcgactac accttcctgc
      901 agaagagcgc caagaattcg ggcgtcgacg ttcgactgtg ggagtcgggc tcgggctcgc
      961 agatcgcgct ctatcccaac ctcaacgtca acgacgagga ttggcgcaag ctgttccgcg
     1021 acgcgcgctt ccgccgtgcg ctgtcactcg ccatcgatcg cgacgagatg aaccaggtcg
     1081 tctatatcgg gctggccaag ccgtcgaaca acacgatcat ggaacgctcg gagctgttca
     1141 agccggagta tgcgaccaag tgggcgcagt acgatctcaa gcgcgccaac aagctgttgg
     1201 acgagatcgg cctcaccaag cgcgacgccc agggcatccg cctgctgccc gacggccggc
     1261 cggcaaccat cgtggtcgag aaccagagcg aggagaccga agattccgat gccctgcaat
     1321 tgatcaccga ctactggaag aagatcggca tcaagatgct ggtgaagccg cagaccaagg
     1381 agaacttccg cctgcgcact ttctccggcg aagccctgat gacggccttt gccggcgtcg
     1441 tgaccgcggt gccgacgccg gagaccagcc ccaaggagtt cgcgccgacc atgcagggcg
     1501 gcctgcaatg gccgaaatgg ggcatgttcg tcgaatccaa gggcaagcaa ggcgagaagt
     1561 gcgacatgga ggacgcctgc aagctcctcg actacgtcaa ggaatgggag cacgcgacca
     1621 acagcgcgga gcgccgcaag gcgtgggaca agatcctgca gaccaacgcc gacgaagtgt
     1681 tctccatcgg cacggtgaac ggcatccgcc agccgatcgt ggtcggcccc aaggtgcgca
     1741 acgtgccgaa ggagggctat tacgcctggg accccggcgg atatatcggc ctctaccagc
     1801 ccgacacatt ctggatcgcg ccgtaggcgg ccactgtcat cccgagcgca gcgagggacc
     1861 tttagcgatg ctgatcaagg gtccctcgct tcgctcggga tgacaccatt ttctgcagcg
     1921 cgaccagtgc gatgacagcc acacgggacg cgctctagct acgccagtcg ttcactcgga
     1981 cgctgatgtc ggacggcagc gccaggccaa gcgtcgtcag cgctgaacga ttgacgctca
     2041 gggtgaattg cgtcgctccc ttgatcggca ggtcggccgg gttggcgcca tgcaggatca
     2101 tgtccacata cttggcggcg ccttaata
//
LOCUS       DASWGA010000390         7885 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1309949, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000390 DASWGA010000000
VERSION     DASWGA010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7885
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1309949"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VF991_09385"
     CDS             complement(<1..555)
                     /locus_tag="VF991_09385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556694.1"
                     /translation="MKSILTMAWTAEDPSAFDLAAKIARTFDARLVGLEPPSYGVMSM
                     AWADAGMGAPIGGGLAEDAEERQRVAAVKQAFDQRAAGLAAEWRSADDSGPTAIGTIG
                     RAYDLIIMPQPGPLPKMPESVFETALFDSGRPVLVVPPAFNGMVGKRILFAWNGSTES
                     ARAISLAMPVLGGAETIEVLSVEGA"
     gene            839..1003
                     /locus_tag="VF991_09390"
     CDS             839..1003
                     /locus_tag="VF991_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019564496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX9556695.1"
                     /translation="MLSIFRRLMKNEHGATAIEYTLIASLIAVAAIVAMGTVGTKVNG
                     VLSNVASSMG"
     gene            1266..1430
                     /locus_tag="VF991_09395"
     CDS             1266..1430
                     /locus_tag="VF991_09395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019564496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX9556696.1"
                     /translation="MLSIFRRLMKNEHGATAIEYTLIASLIAVAAIVAMRSVGTKVNG
                     VLSNVASSMG"
     gene            1553..1816
                     /locus_tag="VF991_09400"
     CDS             1553..1816
                     /locus_tag="VF991_09400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556697.1"
                     /translation="MANASFADETSSLSDASRHRTAPRRRRGGLMRRAIAISRRLLVC
                     PRGTVLVGYTSLMLLVAVAALIMLGHVDSRADHAHDAKTTAAN"
     gene            complement(1844..2434)
                     /locus_tag="VF991_09405"
     CDS             complement(1844..2434)
                     /locus_tag="VF991_09405"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HEX9556698.1"
                     /translation="MAMTMLQMAGATPSPATLSDGILLIIDAQREYTDGLLPLSGVQP
                     AIEALAGLLEKARKAGAPIVHVRHQSKGKAFNPSSSGYEIVVPLAPRAGETIIDKALP
                     NAFAGTDLAKHLAVSGRKNLIVGGFMTHMCVSATVRSATDNGYMSTIAADTVATRDLP
                     DATGGPTITADAINRITLAALSDRFAWIVPAARQIG"
     gene            2598..2720
                     /locus_tag="VF991_09410"
     CDS             2598..2720
                     /locus_tag="VF991_09410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556699.1"
                     /translation="MAGFEFGALMGLELARTIATGGDPAAHARWAAGLEGVTPT"
     gene            2754..4517
                     /locus_tag="VF991_09415"
     CDS             2754..4517
                     /locus_tag="VF991_09415"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IlvD/Edd family dehydratase"
                     /protein_id="HEX9556700.1"
                     /translation="MASRKRRAPGAPKPGDHSARNATGLRQGLATYGDAGFSLFLRKA
                     FIKAGGYSDDALDRPIVGITNTFSDYNPCHGNVPDLIEAVKRGVMLAGALPMVFPTVS
                     IHESFSHPTSMFLRNLMSIDTEEMIRAQPMDSVVLIGGCDKTLPAQLMAAASADRPAV
                     VLPVGPMLVGHFKGEVLGACTDCRRLWGQYRAGTFSATDIEQVSERLAPTKGTCMVMG
                     TASTMGCLVETLGMGLPGSGSIPATHSDRLRVAEASGKLAAEMAKQHGPRPSEIMTKA
                     AFRNALTVLQAIGGSTNALVHLTAVARRLGVEIELEEFDQIGRKVPVLVDLKPSGDHY
                     MEHFHWAGGNSRLMREIRGHLDETCRTVGGRSLKQVIDAAELVPNQTVIRTPKNPIKP
                     VGGMAVLRGNLAPRGAVIKHAAASPALMTHTGRAVVFDSLDDLAARGDDPALDVKAED
                     ILVLRNAGPKGAPGMPEAGSFPIPLKLARAGVKDMIRISDARMSGTAFGTIVLHVAPE
                     AAIGGPLALVKTGDRISLDVAKRRLELLVDAKELARRRKAWKAPPPPADSERGYAGLF
                     QKEVLQADQGVDFDFLGPAKS"
     gene            4514..5509
                     /locus_tag="VF991_09420"
     CDS             4514..5509
                     /locus_tag="VF991_09420"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX9556701.1"
                     /translation="MSEAKLPGISVVVTCYNCRDYIGDAVRSVARQTLGDFECVIVDD
                     ASTDDSADVVRRTLDELGDPRFSMIRLAKNVGQTGATRRGLAATKGSFVCFLDSDDLW
                     HADFLERHLAAHLNESYAVGFTACNARLIDGQGKLIAGCVYWFGKERASADRDRAFAP
                     IDPARVPKLDVAGNAAHWQKQTPYRLYTKRAVHWVWVSTSSMMFRRSLIDLVFPDDDE
                     AFRLHMDFYVVVMAQMVAGSLLIDEALYSYRLHGRNGAADNPVLGGRLHLSSRNWGNT
                     YAVMLDRMLSALARNRDRFVGALGERQYRRLLLRMKAARAAWPASWLFLAQSWFV"
     gene            5627..6985
                     /locus_tag="VF991_09425"
     CDS             5627..6985
                     /locus_tag="VF991_09425"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9556702.1"
                     /translation="MERLGRVVILWAGVFTADVADIRHVSAQAPAVSSSELKRQYDAA
                     FQETLSKPADLDVLFRFAGLATQVGDLEGAVSALERMLLINPDLPRVRLELGVLYYRL
                     GSYEVARTYLDTALKSPTLPADVRAKAQEYLGQIASQERPSSLGGEVFFGWRYQSNAN
                     LGPAGSRVLLFGQAANLNQAGLGTADWGAVSSLAVRHRYDFGNQDKAALETQFIAYAS
                     RQFQVSAANVALLDLTSGPRFQIFNGVLEDVSLKPFVTGGYVWVNDTPYYGSWGGGLE
                     ASVLLADGFRNSSVAIFRRQNNQDTSSLPVNSQYRGNSMTANTAFQYQIAPTVMLFAT
                     GSAQRFDADIAPWQSYTLVGVGGGFAFQFPDPLLKTGLPWTINLSVSEQWWAYDQPDI
                     VVDPNVMRYQNDTILNLVLTVPFDDRTTLSLSGGRFVRASTVPNYAFENNSFMFGVSW
                     RF"
     gene            7011..>7885
                     /locus_tag="VF991_09430"
     CDS             7011..>7885
                     /locus_tag="VF991_09430"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEX9556703.1"
                     /translation="MGNAAIGGGRLLAATLLGVAALATISTNVVARVGVTSGADGDPL
                     GKPPNENERILRIGIDVQANELITTNANDRAHLVFLDGSSLTVGPNARLTIDKFVYDP
                     NTQRGELAINASKGVLRLVGGKISKNTPITITTPATTIGIRGGITIVSVTQVQTIANF
                     VFGTSMTVTAGGQTQTATRAGSAIVTNVGAIPGVPTLVKPGSLTAALSQLEGASSNSN
                     SGADQSAQNSGFSGKNSGQPLKTPDVNQPGPPNPTNNTLTNAVSNTNPAGQPLGNSTP
                     QNNQTVIIVTSPNPNP"
BASE COUNT         1361 a         2621 c         2496 g         1407 t
ORIGIN      
        1 ggcgccctcc acgctcagca cctcgatcgt ctcggcgccg ccgagaaccg gcatcgccag
       61 cgaaatcgcc cgcgcgcttt ccgtcgagcc gttccaggcg aacaggatcc gcttgccgac
      121 catgccgttg aaggccggcg gcaccacgag caccggccgg ccggaatcga acaaggcggt
      181 ctcgaacacg ctctccggca tcttgggcag gggccccggc tggggcatga tgatcaggtc
      241 ataggcgcgc ccgatcgtac cgatcgccgt cgggccgctg tcgtcggccg aacgccattc
      301 cgccgcgagg ccggccgcgc gctgatcgaa ggcctgcttc acggcggcga cgcgttggcg
      361 ttcctcggca tcttccgcca ggccgccgcc gatcggcgcg cccatgccgg catcggccca
      421 cgccatgctc atcacgccat acgacggcgg ctcgagtccg accaggcggg cgtcaaacgt
      481 ccgcgcaatc ttcgctgcca gatcgaaagc ggacggatct tccgccgtcc aggccattgt
      541 cagaattgac ttcatgacat gcctcccctg tcggcgaacg atagcatgac gccggccaac
      601 accggacctt taaagtgccg gcgctgccgc caatcgcggg ccaagatgaa gttgatacaa
      661 atatcgtgtt gatgaagttt tttgtatcaa tatgttaggt cacatacctc aactatttat
      721 tgaggtaagg gtgcattttt cggccccagc gtttgtatcg atcgcttcag cagtccccag
      781 aactgttggc gtgatggaca gacgccggtg agagaacgtt ttttctttgg agatacaaat
      841 gctgtccatt ttccgtcgtc tgatgaagaa cgagcatggc gcaaccgcca tcgaatacac
      901 gctgatcgcc tcgttgatcg ccgttgcggc gatcgtcgcg atgggcaccg tcggcaccaa
      961 ggtcaacggc gtgctcagca acgtcgcgag ctcgatgggc tgatcgggtc gttttggtct
     1021 cgcaacgggc ggtccggcaa cggaccgccc gtttcctttg gcgccgccgg ccgtgaccaa
     1081 gttgatacaa ttaaacaatt gagtagcccc gtttgatcaa tatgttggag ggcatatctc
     1141 aactgcttct tgaggtatgg gcgcattcca gcccagcgtt cggtcaatcg ctccaacagt
     1201 ccccagagcc gttggggcga tggacaagac gccggttaaa aacgtttttt cctatggaga
     1261 tacaaatgct gtccattttc cgccgcctga tgaagaacga gcatggcgca accgccatcg
     1321 aatatacgtt gatcgcctcg ctgatcgcgg ttgccgcgat cgtcgccatg cgcagcgtcg
     1381 gcaccaaggt caacggcgtg ctcagtaacg tcgccagctc gatgggctga tcggcctttt
     1441 cggtcttgga atgggcggtc cggcaacgga ccgcccattt cttttgtcac tgcaggccta
     1501 cctaccaacg ttacatgccg actgtttgtg cgcctgggcc gaggcggtag ttttggcgaa
     1561 tgcctcgttc gccgacgaaa ccagcagcct ttccgatgcc tctcggcatc ggaccgcccc
     1621 tcgtcgccgg cgcggtggtc tgatgcggcg cgcgatcgcc atatcgcgtc gcttgctcgt
     1681 ctgcccgcgc ggcactgtat tggtcggata tacgtcgctg atgctgttgg tcgccgtcgc
     1741 cgccctcatc atgctcggcc atgtcgacag tcgcgcggac cacgcgcacg acgcaaaaac
     1801 caccgctgcg aactgacgac ggacgaacgg gcttgccggc ggttcagccg atttggcgag
     1861 ccgcgggcac gatccaggca aagcgatcgg aaagcgccgc cagcgtgatg cgattgatcg
     1921 catcggcggt gatggtcggc ccgccggttg cgtcgggcaa gtcgcgcgtc gccaccgtgt
     1981 cggcggcgat ggtgctcatg tagccgttgt cggtggccga gcgcaccgtc gccgagacgc
     2041 acatgtgggt catgaagccg ccgacgatca ggttcttgcg gccgctgacc gccaggtgct
     2101 tggcgaggtc ggtgccggca aaagcgttgg gcagggcctt gtcgatgatc gtctcgccgg
     2161 cgcgcggcgc cagcggcacc acgatctcgt aaccgctcga ggaggggttg aacgccttgc
     2221 ccttcgactg atggcggaca tgcacgatcg gcgcgccggc cttgcgcgct ttctcgagca
     2281 ggccggccag cgcttcgatc gcgggctgca cgcccgacag cggcagcaga ccgtcggtgt
     2341 attcgcgctg ggcgtcgatg atcagcagaa tgccgtccga caaggtcgct ggactgggcg
     2401 tcgctcccgc catctgcagc atggtcattg ccatgttttt cccctcgact acgctacggt
     2461 tgtgtaagcc tcggacatat caacgcccat ggcgattgat tttgcaaggc ccacggttgc
     2521 atgtcatgcg caattggtcg tgacggggtc gtgaaacggc gtcagcaacc tgccggcact
     2581 gtgatctttg ccgggccgtg gccggcttcg agtttggcgc gctgatgggg ctcgagctcg
     2641 cgcgcaccat cgccacgggc ggcgatcctg ccgcgcatgc gcgctgggcc gccggtctgg
     2701 aaggcgttac accgacctga cagactggcc ctgagttcag gagacaaacg tccatggctt
     2761 cccgcaaacg ccgcgcacca ggcgcgccaa agcccggaga tcactccgcg cgaaacgcta
     2821 ccggactgcg tcaaggcctt gccacctatg gcgatgcggg cttctcgttg ttcctgcgca
     2881 aggctttcat caaagccggc ggctattccg acgacgcgct cgaccggccg atcgtcggca
     2941 tcaccaacac cttcagcgac tacaacccct gccatggcaa cgtgcccgac ctgatcgagg
     3001 ccgtgaaacg cggcgtcatg ctggccgggg cgctgcccat ggtcttcccg acggtgtcga
     3061 tccacgagag cttctcgcat cccaccagca tgttcctgcg caacctgatg tcgatcgaca
     3121 ccgaggagat gatccgggcg caaccgatgg actcggtggt gctgatcggc ggctgcgaca
     3181 agacgctgcc ggcgcagctc atggccgccg ccagcgccga ccggccggcc gtcgtgctgc
     3241 cggtcgggcc gatgctggtc ggccacttca agggcgaggt tttgggcgcc tgcaccgact
     3301 gccgccgcct gtggggccag tatcgcgccg gcacgttctc cgcgaccgac attgaacagg
     3361 tgagcgaacg gctggccccg accaagggca cctgcatggt catgggcacg gccagcacca
     3421 tgggctgcct cgtcgagacc ctgggcatgg gcctgccggg cagcggctcg atcccggcga
     3481 cacactccga ccgcctgcgg gtggccgagg cgagcggcaa gctggccgcg gaaatggcca
     3541 aacagcacgg cccgcggccc agcgagatca tgaccaaggc ggcgttccgc aacgcgctca
     3601 ccgtgctgca ggcgatcggc ggctcgacca acgcgctggt gcacctcacc gccgtggcgc
     3661 gccggctcgg ggtcgagatc gaactcgagg agttcgatca gatcggccgc aaggtgccgg
     3721 tgctggtcga cctcaagcca tcgggcgacc attacatgga gcatttccac tgggccggcg
     3781 gcaattcgcg gctgatgcgc gagatccgcg gccatctcga cgagacctgc cgcacggtcg
     3841 gcggccgcag cttgaagcag gtcatcgacg ccgccgagct ggtgcccaac cagacggtga
     3901 tccgtacgcc caagaatccc atcaagcccg tgggcggcat ggccgtgctg cgcggcaacc
     3961 tcgcgccgcg cggcgcggtc atcaagcacg ccgccgcctc gcccgcgctg atgacgcaca
     4021 ccggtcgtgc cgtggtgttc gattcgctgg acgacctcgc ggcgcgcggc gacgatccgg
     4081 cgctggacgt caaggccgag gatatcctgg tgctgcgcaa tgccgggccc aagggcgcgc
     4141 ccggaatgcc cgaggccggc tcctttccca tccccctgaa gctcgcgcgg gccggcgtga
     4201 aggacatgat ccgcatctcc gacgcgcgca tgagcggcac ggcgttcggc accatcgtgc
     4261 tgcacgtcgc gcccgaggcg gccatcggcg gtccgctggc tttggtgaag acgggcgatc
     4321 gcatcagcct cgatgttgcc aagcgccggc tcgagttgct ggtcgacgcc aaggaactcg
     4381 cccggcgccg caaggcgtgg aaagcgccgc cgccgcccgc cgatagcgag cgcggctatg
     4441 ccggcctgtt ccagaaggaa gtgctgcagg ccgaccaagg cgtcgatttc gattttctcg
     4501 gtccggcgaa atcgtgagcg aagccaagct tcccggcatt tccgtcgtcg tcacgtgcta
     4561 caactgccgt gactatatcg gcgacgcggt ccgttcggtc gcgcgccaga cgctcggcga
     4621 tttcgagtgc gtcatcgtcg acgatgcctc gaccgacgat tcggccgacg tggttcgccg
     4681 gacgctggac gagttgggcg acccgcgctt ttcgatgatc cgcctggcga agaatgtcgg
     4741 ccagaccggg gccacgcgcc gcggcctggc ggcaaccaaa ggcagtttcg tctgcttcct
     4801 cgactcggac gatctctggc acgccgattt cctcgagcgc cacctcgccg cgcatctgaa
     4861 cgagtcctat gccgtgggct tcaccgcctg caacgcgcgg ctgatcgacg gccagggcaa
     4921 gctgatcgcc ggctgcgtct attggttcgg caaggagcgc gccagcgccg accgcgaccg
     4981 cgccttcgcg ccgatcgacc cggcgcgcgt gcccaagctc gacgtcgcgg gcaacgcggc
     5041 gcactggcag aaacagacgc cctatcgcct ctacaccaag cgcgcggtgc actgggtatg
     5101 ggtcagcacc tcgtcgatga tgttccgccg ctcgctgatc gacctggtct ttcccgacga
     5161 tgacgaggcg ttccgcctgc acatggattt ctacgtcgtc gtcatggcgc agatggtggc
     5221 gggctcgctg ctgatcgacg aggcgctcta ctcgtatcgc ctgcacggcc gcaatggcgc
     5281 ggccgacaat ccggtgctgg gcggccggct gcacctgtcg agccgcaatt ggggcaacac
     5341 ctacgccgtg atgctggacc gcatgctgtc cgccttggca cggaaccgcg accgtttcgt
     5401 cggcgccctg ggcgagcgcc agtaccgacg tttgctgctg cgcatgaagg cggcgcgggc
     5461 agcctggccc gcatcctggc tgttcctggc gcagagctgg tttgtgtgag gaatgccaca
     5521 tatttaacat gcgaaccgcc gttgaattcg ccggtgttct atgatgccgt ctgccgtcga
     5581 ttagcttgtc gcagggcggg ctgggggagc agaagcgttg gctcggatgg agcggcttgg
     5641 ccgcgtcgtc attctatggg cgggtgtctt caccgcagac gttgccgata tccggcacgt
     5701 ttccgcccag gcgccggcgg tttcttcatc ggaactgaag cgtcagtacg acgccgcctt
     5761 ccaggagacg ctcagcaagc ccgccgatct cgatgtgctg ttccgcttcg ccggcctggc
     5821 aacgcaggtc ggcgacctcg aaggcgcggt ctcggcgctc gagcgaatgc tgctgatcaa
     5881 tcccgatctg ccgcgcgtgc ggctcgaact gggcgtgctg tactaccggc tgggctcgta
     5941 tgaagtcgcg cggacctatc tcgacacggc gctgaagtcg ccgacgctgc cggccgatgt
     6001 gcgggcaaaa gcgcaggaat atcttggtca aattgcgtcc caggagcgac catcgagctt
     6061 gggcggcgag gtcttcttcg gctggcgcta ccagtccaac gccaatctgg gcccggcagg
     6121 ctcgcgcgtg ctgttgttcg gccaggcggc caacctcaat caggcagggc ttgggacggc
     6181 ggactggggc gccgtgagtt cactggcggt gcgccatcgc tacgacttcg gcaaccagga
     6241 caaggccgct ctcgagacgc agttcatcgc ctatgccagc cgccagttcc aggtgtcggc
     6301 ggcaaacgtc gccctgctcg acctgacgag tgggccgcgt ttccagatct tcaatggcgt
     6361 gttggaggat gtctcgctga agccgtttgt caccggcggc tacgtctggg tcaacgacac
     6421 gccctattat ggcagctggg gtggcggcct cgaggcgagc gtgctgctgg ccgacggctt
     6481 tcgcaacagt tcggtcgcca tcttccggcg ccagaacaat caggacacca gctccctgcc
     6541 cgtgaacagc cagtatcgcg gcaattcgat gacggcgaac acggcgtttc agtaccagat
     6601 cgcgccgacg gtgatgttgt tcgccaccgg aagtgcccag cgtttcgacg ccgatatcgc
     6661 gccctggcag agctacacgc tggtcggtgt cggcggcggc ttcgccttcc agtttcccga
     6721 cccgctgctc aagaccggtc tgccgtggac catcaatcta tcggtaagcg agcaatggtg
     6781 ggcttatgat caaccagata ttgtggtcga tcccaacgtg atgcgctacc agaacgacac
     6841 gattctgaac ctggtgctca cggtcccatt cgacgaccga accaccctga gcctgtcggg
     6901 gggccgtttc gtgcgcgcct caactgtgcc aaactacgcg ttcgaaaata acagctttat
     6961 gtttggggtg agctggcgct tctagccgcc agccaggagt gggaaggcaa atgggcaatg
     7021 cagccattgg tggcggccgg ctcctggccg cgaccttgct cggcgtggcg gcgctcgcca
     7081 cgatctcgac caacgtggtg gcgcgcgtcg gcgtcacttc gggggccgat ggtgatccgc
     7141 tcggcaagcc gccgaatgaa aacgagcgca tcctgcgcat cggcatcgac gtgcaggcca
     7201 acgagctgat caccaccaac gccaacgacc gcgcccacct ggtgttcctg gacggcagct
     7261 cgctcaccgt cggcccgaac gcgcggctca ccatcgacaa gttcgtttat gatccgaaca
     7321 ctcaaagggg cgagctcgcg atcaacgcca gcaagggcgt gctgcgcctg gtgggcggca
     7381 agatcagcaa gaacacgccc atcaccatca ccacgcccgc gaccacgatc ggcatccggg
     7441 gcggcatcac catcgtttcc gtcacccagg tccagaccat tgccaacttc gtcttcggca
     7501 ccagcatgac cgtgaccgcc ggcggccaga cccagaccgc cacccgggcc ggatcggcga
     7561 tcgtgaccaa tgtcggcgcc atacctggcg tccccacact cgtgaagccg ggcagcctga
     7621 ccgccgccct tagccaactc gaaggtgcga gttccaacag caacagcggc gcggatcagt
     7681 cggcgcagaa ctccgggttt tccggcaaga attccggcca gccgctcaag acgcccgatg
     7741 tcaaccagcc cggaccgccc aacccgacca acaacacgct gacgaacgcc gtcagcaaca
     7801 ccaaccctgc gggccagccg ctgggcaaca gcacgcccca gaacaaccag acggtcatca
     7861 ttgtcacgag ccccaacccc aaccc
//
LOCUS       DASWGA010000391         2375 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1186327, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000391 DASWGA010000000
VERSION     DASWGA010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1186327"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1278
                     /locus_tag="VF991_09435"
     CDS             <1..1278
                     /locus_tag="VF991_09435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556704.1"
                     /translation="AIFTPGYAAAEQFTSAKQGPWTDIYGLCAALYYAIVGRPPPSAF
                     DRMVNDTYEPLTKLSPAGFSSRLLSSIDAGLAMQASDRPQSIADWRTMLGPASAPQMP
                     AQATRTAPKGRLGLLIGAAAAAILALAGGGYYFVTSQPSAPAVAGVPAASAEKVAQEQ
                     AELARLRAEAAARAKAEQEAALQHQAEEEIRRKIAAETAEKKRLEEEAKQKADAEAAA
                     KRKAEEDERKAVEAAEAALQLGKVDRQHIQVALVALAFGGSLLDGTLGSGSRELITAW
                     QKARNHPATGFLTEPQYQALLQEAAPAVSKFDDEQKKIEEERKRAATAKVPVNPDIVP
                     LEENKRIVLYLARGQNCQATASYISRVFANRLDLQLRGGWQTFAADKAGDFARSFSSP
                     SNSKFTLLVKGNLKTRLVSVENVTSHCLWKGSF"
     gene            complement(1280..>2375)
                     /locus_tag="VF991_09440"
     CDS             complement(1280..>2375)
                     /locus_tag="VF991_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX9556705.1"
                     /translation="ESHVTVPQIGGMFRGDFNRKSVLAEFGFRLPSAIDNRPLKFEEW
                     EALRPQTTFVSATPGPWEMERTQGIFIEQVIRPTGLIDPTVIIRPVEKQVDDLIAECR
                     DCAKKAERVLVTVLTKRMAEDLVEYMHEAGIRCRYLHSDIDTLERIEIIRDLRLGAFD
                     VLVGINLLREGLDIPECALVAILDADKEGFLRSPTSLVQTIGRAARNVDGRVILYADK
                     MTDSIKYAIAETDRRRSKQTAYNEAHGITPASIKKNINEILQSTAERDHYTVDTGVSG
                     DVHLIGHNLRSHIAELEKRMRDAAANLEFEEAARVRDEIRRLEANELELPGQAASANV
                     GVHLGRMQNSRVFRGVRTGSGGRPTRRSGR"
BASE COUNT          413 a          756 c          801 g          405 t
ORIGIN      
        1 gcgattttca cgccgggtta tgccgcggcc gaacaattca cctcggccaa gcaggggccg
       61 tggaccgaca tatacggcct ctgcgccgcg ctctattacg ccatcgtcgg tcgtccaccg
      121 cccagcgcct tcgatcgcat ggtgaacgat acctacgaac ccctgacgaa gctttcgccg
      181 gcgggttttt catcgcgtct tctgagcagc atcgatgccg ggctggcgat gcaggcaagc
      241 gatcgcccgc aatcgatcgc cgactggcgc acgatgctcg gccccgcttc ggcgccgcaa
      301 atgcccgccc aggcgacacg cacggcgccg aagggccgcc tcggtttgct gatcggcgcg
      361 gctgcggccg ccatcctggc gctggccggc ggcggctatt atttcgtcac ttcgcagccg
      421 tcggctcctg cggtagccgg cgtccctgcc gcgagtgccg agaaagtcgc gcaggagcag
      481 gccgagttgg ccaggttgcg ggcagaagct gcggcgcgtg caaaggccga acaggaggcg
      541 gccctccagc accaggccga agaggagatc cggcgcaaga tcgcggccga gaccgccgag
      601 aagaagcgcc tcgaggagga ggccaagcag aaggccgatg ccgaggccgc ggccaagcgc
      661 aaggccgagg aagacgagcg caaggccgtc gaagcggccg aagcggcgct gcaattggga
      721 aaggtcgacc gccagcatat ccaggttgcg ctggtcgccc tggcgttcgg cggaagtcta
      781 ctggacggca cgctcggctc gggctcgcgc gagctgatca ccgcgtggca gaaagcgcga
      841 aaccatccgg cgacaggatt tctcaccgaa ccgcagtacc aagccctgct gcaggaggcg
      901 gcgccggccg tgtccaaatt cgacgacgag cagaagaaga tcgaagagga aaggaagagg
      961 gcggcaacgg caaaggtgcc tgtcaatccc gatattgttc ccttggaaga gaacaagaga
     1021 atcgtcttgt atctggcacg agggcagaac tgccaggcga ccgcaagcta catctcccgg
     1081 gtctttgcca ataggctgga ccttcagctg cgaggcggtt ggcagacgtt cgcggccgac
     1141 aaggccggcg attttgccag aagcttttca agcccctcga acagcaaatt cacgctgttg
     1201 gtgaagggaa acctgaaaac aagactcgtt tcggtcgaga acgtcacttc ccactgcctg
     1261 tggaagggtt cgttctgatc tagcgtccgc tgcgccgcgt cggccggccg cccgagccgg
     1321 tgcgcacccc gcggaacacc cggctgttct gcatgcggcc gagatgcacg ccgacattgg
     1381 ccgaggcagc ctggccgggc agctcgagct cgttggcctc caggcgccgg atctcgtcgc
     1441 ggacgcgcgc ggcctcctcg aactcgaggt tggcggcggc gtcgcgcatg cgcttctcca
     1501 gctcggcgat gtggctgcgc aaattgtggc cgatcaggtg gacgtcgccc gacacgccgg
     1561 tatcgaccgt gtagtggtcg cgctcggccg tcgactgcag gatttcgttg atgttcttct
     1621 tgatcgaggc cggcgtgatg ccgtgcgcct cgttgtaggc cgtctgcttg ctgcggcgcc
     1681 ggtcggtctc ggcgatggcg tacttgatcg agtccgtcat tttgtcggca tagaggatga
     1741 cgcggccgtc gacgttgcgc gcggcgcggc cgatcgtctg caccagcgag gtcggcgagc
     1801 gcaggaagcc ctccttgtcg gcgtcgagga tggcgaccag ggcgcattcg ggaatgtcga
     1861 gaccctcgcg caggaggttg atgccgacca gcacgtcgaa agcgcccagc ctgaggtcgc
     1921 ggatgatttc tatgcgctcc agcgtgtcga tgtcggaatg caggtagcgg cagcggatgc
     1981 cggcctcgtg catgtattcc acgaggtcct cggccatgcg cttggtcagc accgtgacca
     2041 gcacgcgctc ggccttcttc gcgcagtccc ggcactcggc gatcagatcg tcgacctgct
     2101 tctcgacggg ccggatgatg accgtcgggt cgatcagccc ggtcggacgg atgacctgct
     2161 cgatgaagat gccctgcgtg cgctccattt cccacgggcc gggcgtggcg ctgacgaacg
     2221 tcgtctgtgg ccgcagcgct tcccactcct cgaacttcag cggccggttg tcgatcgccg
     2281 atggcaggcg gaagccgaac tcggccaaca cgctcttgcg gttgaagtcg ccgcggaaca
     2341 tgccgccgat ctgcggcacc gtgacgtggc tctcg
//
LOCUS       DASWGA010000392         4024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1310213, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000392 DASWGA010000000
VERSION     DASWGA010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4024
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1310213"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..533)
                     /locus_tag="VF991_09445"
     CDS             complement(69..533)
                     /locus_tag="VF991_09445"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9556706.1"
                     /translation="MTDMLIPEGFRKLDVADEFVGLIGPLWFKAEGETLRVGLPLEPR
                     HGNPMGWAHGGLLVTLADMVMGTGSGHATGIRWPHPTISLSTEFVRGARLGQWLEGTA
                     RIARRTLNFCFCSCDLVCGGEVVLVASGVFKVPDVDKIPEAMRAKVMGKWGS"
     gene            complement(530..973)
                     /locus_tag="VF991_09450"
     CDS             complement(530..973)
                     /locus_tag="VF991_09450"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX9556707.1"
                     /translation="MSFDLTDRRIYGFATEEHLRFADVDANGHINNGAFLQLLENARV
                     SYMRTIVRSGLPRFRVVVGRLEIDFKRQMFYPGHATACARLLEVHQRKCVIGHGLFDG
                     DGNCTAVLKAIMVSLNEETHRSMAFDPTVRAALEKFAASKDGLGS"
     gene            complement(978..1823)
                     /locus_tag="VF991_09455"
     CDS             complement(978..1823)
                     /locus_tag="VF991_09455"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9556708.1"
                     /translation="MKRAVRGLDHVVVMVDGIDAAEAAYKKLGFQVQPRGFHKKLGTA
                     NHLMIFDKDYFEILGIVEDSPFNSERREWLKDGGGLANVALATDGADLAVDAFKAAGL
                     QPDAPLFFDRAVEVEGRMEHAQFRTVRIPKTHMPVVGFFVCEHLTPDFVYRREWARHP
                     NGARGILGVTVIAGQPARWTAELEKYFGAGSVRREGEGLVVDTGTQPIRYLSRQEYMQ
                     RYPGVTPVRPGDHPALLSVRVDSLAACAALLAENGVKVTRPDAARLIVPPSEAAHLTL
                     EFRER"
     gene            complement(1820..2278)
                     /locus_tag="VF991_09460"
     CDS             complement(1820..2278)
                     /locus_tag="VF991_09460"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX9556709.1"
                     /translation="MQSASPRYWEDYQVGTKYPLGSTSFSVEEITAFARQFDPQSFHV
                     DAVAAKESMFGGLIASGWHINAKLMRLFVDNYLDRRTALGSPGLDEIRWLKPVRPGDT
                     LTAWVECADKVPSRSRPDMGIIHEHWRATNQKGELVLTVKGINMVRRRPA"
     gene            2360..3997
                     /locus_tag="VF991_09465"
     CDS             2360..3997
                     /locus_tag="VF991_09465"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9556710.1"
                     /translation="MDEPTLVRRLTTIASVDVVGFSTMSARNEEHALDLLGTRMATAG
                     AIVKHHRGRVFKLTGDGLLAEFVSPVEAVRAALEIQEAMRSTNATAGPDDQLVLRIGI
                     NLGDIVESGDDLMGDAVNVAVRLESIAPHGGICVSASIYEQIIGKLTLGAEDMGEQHV
                     KNIPRPIHAYRLTSEATTPVMAATPKPSAAKRPSRLLIGTGAVAVVAIVAIAGAWLLR
                     ENPRPAAPPVPAAQAPTASPALAAAVPQPPAVAPPAPTPSPVATPPPAIMTPRIYSAA
                     DVPFVPDGRRRALENYGRAEDSKAMAINVRGIFAVATRRIDAQTARRIALEECNKAVQ
                     RELPVIRESDRCMTYAVGNDVVWTFRSPPLPPPPYVPAARPSPPITLDPATVPLVGET
                     ARKNLGEHYLKSDRKRALVLGLNHFDWWSPSDSEADAVRCNLQICGHLTGRPCVIYAI
                     DEQVVVRTPQRYRVVDIFTPQALTNLDASQQDAVERYLVANDWRAIAVGRNGRLGIVV
                     GRASESAAADNAIQACAQAGGTECAVSAVGPFLVTPK"
BASE COUNT          667 a         1402 c         1311 g          644 t
ORIGIN      
        1 ccacctcccc cgcgaagcgg gggagggttg gggtgggggc gtcgcttcgc tcgggatgac
       61 agttttgctc agctacccca tttccccatc accttggcgc gcatcgcctc ggggatcttg
      121 tcgacatccg gcaccttgaa cacgcccgac gcgaccagga cgacctcgcc gccgcagacg
      181 agatcgcagc tgcagaagca gaaattgagg gtgcgtcggg caatgcgcgc ggtgccttcc
      241 agccactgac cgagccgggc gccgcgcacg aactctgtgc tgagcgatat cgtgggatgc
      301 ggccagcgga tgccggtggc atggcccgag cccgtgccca tcaccatgtc ggccagggtc
      361 accagcaggc cgccatgcgc ccagcccatg ggattgccgt ggcgcggctc gagcggcagg
      421 ccgacgcgca gcgtctcgcc ttccgccttg aaccagagcg gcccgatcag cccgacgaat
      481 tcatcggcga catcgagctt gcggaagcct tcggggatca acatatcggt catgagccaa
      541 gtccgtcctt ggaggcggcg aatttctcca gcgcggcgcg caccgtcggg tcgaacgcca
      601 tgctgcgatg ggtctcctcg ttcagcgata ccatgatcgc cttcagcacg gccgtgcagt
      661 tgccgtcgcc gtcgaacagc ccgtggccga tcacgcattt gcgctgatgg acctcgagca
      721 gacgggcgca ggccgtggca tggccgggat agaacatctg gcgcttgaaa tcgatctcga
      781 gccggccgac cacgacgcga aaacgcggca ggccagaccg cacgatggtg cgcatgtagg
      841 acacccgcgc gttttccagg agctgcagga aggcgccgtt gttgatgtgg ccgttggcgt
      901 cgacgtcggc gaaacgaaga tgctcctcgg tggcgaatcc gtagatccgc cgatccgtca
      961 ggtcgaaact cacgagatca gcgctcccgg aattccaggg tgaggtgcgc ggcctcggac
     1021 ggcggcacga tcagccgggc ggcatcgggt ctcgtgacct tgacgccgtt ctccgcgaga
     1081 agtgctgcgc aggcggcgag gctgtcgacc cgcaccgaca agagcgccgg atgatcgccc
     1141 ggccgcaccg gcgtcacgcc aggatagcgc tgcatgtact cctggcggct gaggtagcgg
     1201 atgggctggg tgccggtatc gaccaccagc ccctcgccct cgcgtcgcac cgaacctgcg
     1261 ccgaaatatt tctcgagctc ggccgtccat cgggccggct gcccggcgat caccgtcacg
     1321 cccaaaatgc cgcgcgcgcc gttggggtga cgggcccatt cgcggcgata gacgaagtcg
     1381 ggcgtcaggt gctcgcaaac gaagaaaccg accaccggca tgtgggtctt ggggatgcgc
     1441 acggtgcgga actgggcatg ttccatcctg ccctcgacct cgaccgcgcg atcgaagaaa
     1501 agcggcgcat cgggctgcag gcccgccgcc ttgaaggcgt cgacggcaag gtcggcgccg
     1561 tcggtcgcca gcgcgacatt ggccaagccg ccgccgtcct tgagccactc ccgccgctct
     1621 gaattgaacg ggctgtcctc gacgatgccc aggatctcga aatagtcctt gtcgaagatc
     1681 atcaggtggt tggcggtgcc gagcttcttg tggaagccgc gtggttggac ctggaagccg
     1741 agcttcttgt aggctgcctc ggccgcatcg atgccgtcga ccatgaccac gacatgatcg
     1801 agcccgcgca cggcgcgttt catgccggcc tcctgcgcac catgttgatg cccttcaccg
     1861 tcagcaccag ctcgcccttc tggttggtgg cgcgccaatg ctcgtggatg atgcccatat
     1921 cgggccggct cctcgacggc accttgtccg cgcattcgac ccaggcggtg agcgtgtcgc
     1981 ccggccgtac cggcttcagc cagcggatct cgtcgaggcc aggcgagccc agcgccgtgc
     2041 gcctgtcgag gtagttgtcg acgaacagcc gcataagctt ggcattgata tgccagcccg
     2101 aggcgatcag gccgccgaac atcgattcct tggctgccac ggcgtcgaca tgaaagctct
     2161 gcggatcgaa ttgacgggcg aaggccgtga tctcctcgac gctgaagctc gtcgagccca
     2221 acgggtactt cgtgccgacc tggtagtctt cccagtaacg cgggctggcg gattgcatgg
     2281 gctgggtcat cgcagagcgt ggcttcagac gcaagatggt cctatggcct gccgcgcaac
     2341 cgtcggctag cctgtcgcca tggatgagcc caccctggtc agacgcctga ccacgatcgc
     2401 ctctgtcgac gtcgtcgggt tcagcaccat gtccgcacgc aacgaggaac atgcgctcga
     2461 cctcctcggc acccgcatgg cgacggccgg ggcgatcgtg aagcaccatc gcggccgggt
     2521 tttcaagctc accggcgacg gcctgctggc ggaattcgtg agcccggtcg aggcggtgcg
     2581 cgccgccctc gagatccagg aggcgatgcg ctcgaccaac gccacggccg ggccggacga
     2641 ccagctcgtc ctgcgcatcg gcatcaatct cggcgacatc gtggaaagcg gcgacgattt
     2701 gatgggcgac gccgtcaatg tcgcggtgcg tctggaatcg atcgcacccc acggcggcat
     2761 ctgcgtctcg gcctcgatct acgagcagat catcggcaag ctcacgctcg gcgccgagga
     2821 catgggcgag cagcacgtca agaacatccc gcgtcccatc catgcctatc gcctcaccag
     2881 cgaagcgacg acgccagtca tggcggccac gcccaagccg agtgcggcca aacgaccgtc
     2941 gcgccttctg atcggcaccg gcgccgtcgc ggtcgtggcc atcgtggcga tcgcgggcgc
     3001 ctggctgctg cgcgaaaatc ctcgacccgc tgcgccgccc gtcccggcgg cgcaggcgcc
     3061 gacagcgagc ccggccctcg ccgcggccgt accgcagccg cccgccgtcg cgccgccagc
     3121 tcccacgccg tcgccggtcg ctacaccgcc gccggccatc atgacgccgc ggatctattc
     3181 tgccgccgac gtacctttcg tgcctgatgg tcggcgacgg gcactggaga actacggccg
     3241 cgccgaggat tcgaaggcga tggcgatcaa cgtccgcggc atctttgccg tcgccacgcg
     3301 gcgcatcgac gcccagacgg cgcgccgcat cgcgctggaa gagtgcaaca aggccgttca
     3361 gcgcgagctc ccggtcatcc gtgagtccga tcgctgcatg acgtacgcgg tcggcaatga
     3421 cgtagtgtgg acgtttcgct cgccgccgct gccgccgccg ccctacgttc cggccgcgcg
     3481 gccctcgccg cccatcacgc tcgatcccgc caccgtgccg ctggtcggcg agaccgcacg
     3541 caagaacctc ggcgagcatt acctgaaatc ggatcgcaag cgggcgctgg tgctcggcct
     3601 caaccatttc gactggtggt cgcccagcga cagcgaagcc gacgccgtca ggtgcaacct
     3661 gcagatttgc ggccatctta ccggccggcc ctgcgtcatc tacgccatcg acgagcaggt
     3721 cgtggtgcgc acgccgcaac gctaccgcgt cgtcgacatt ttcacgcccc aggccctcac
     3781 caacctcgac gccagccagc aggacgccgt cgagcgctac ctggtggcca acgactggcg
     3841 cgccatcgcc gtcgggcgca acggtcgcct gggcatcgtc gtcgggcgtg ccagcgagag
     3901 cgcggcggcc gacaacgcca tccaggcatg cgcccaggcc ggcggcaccg agtgcgcggt
     3961 gtcagcggtc ggcccgttcc tggtcacgcc gaaatagccg cgttatcgct gggggcgcgc
     4021 cact
//
LOCUS       DASWGA010000393         1617 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1694033, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000393 DASWGA010000000
VERSION     DASWGA010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1694033"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VF991_09470"
     CDS             <1..210
                     /locus_tag="VF991_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9556711.1"
                     /translation="CFCCYLSDLAVDKACQGQGIGKRLIEETRTAAGGSSTTTLLLSA
                     PTAVSFYQGIKMPQADNCFVYRRQK"
     gene            353..793
                     /locus_tag="VF991_09475"
     CDS             353..793
                     /locus_tag="VF991_09475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="translational machinery protein"
                     /protein_id="HEX9556712.1"
                     /translation="MPHTPTHALVWLDFREAKIFLVTADDVKARRIKAHTPHRQVHHK
                     AQEVGSGHVRDDRKFFEAILAAIEDAESWLIVGPGETKKDLEKYLDGHGEELKKKLVG
                     VEAMDHPTDGELLAHARKLFKAHDRMTPNDPRIERAMRGGTARG"
     gene            complement(842..1288)
                     /locus_tag="VF991_09480"
     CDS             complement(842..1288)
                     /locus_tag="VF991_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEX9556713.1"
                     /translation="MNSMLIRSGLAGLMAVSMLAFAPAAFAEMVMYKADLKSSAEVPP
                     VDGKASGALTATYDTATKKLTYTATYKDLTGPATAAHFHGPADAKTNAGIVVPVAGAM
                     ASPLKGEATLTDAQAADLAAGKWYFNVHTAANKGGEVRGQVMKGGM"
     gene            complement(1368..>1617)
                     /locus_tag="VF991_09485"
     CDS             complement(1368..>1617)
                     /locus_tag="VF991_09485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9556714.1"
                     /translation="TRLSGRSQAGRYFGNYGQSSDWRLVPGLVERRPAVLVHHPDDPG
                     GAPLYFILLYWAGERLLHVRDFRYARYVIDGAELIDFR"
BASE COUNT          307 a          535 c          519 g          256 t
ORIGIN      
        1 tgcttctgct gctatctctc cgatctcgcc gtcgacaagg cctgccaggg ccagggcatc
       61 ggcaaacggc tgatcgagga gacgcggacg gccgcgggcg gatcctcgac cacgaccctg
      121 ctgctgtcgg cgccgaccgc cgtgagcttt tatcagggca tcaagatgcc ccaggccgac
      181 aattgctttg tctatcggcg gcaaaagtaa tcctgtcatc ccgaggccga aggccgaggg
      241 acctttaagg ccatgagcaa aggtccctcg ctccgctcgg gatgacagcg gtgcgggttg
      301 caacgccgcc caccgcgcgg gcgttgatct ccgaacagcc ccggagggac ccatgccgca
      361 cacgcccacc catgccctgg tctggctcga tttccgcgag gccaagatct tcctggtcac
      421 cgccgacgac gtgaaagccc ggcgtatcaa ggcccacacc ccgcatcgcc aggtccatca
      481 caaggcacag gaagtgggca gtggccacgt ccgcgacgac cgcaagtttt tcgaagccat
      541 cctggccgcc atcgaggacg ccgaatcgtg gctgatcgtc ggcccgggtg agaccaagaa
      601 ggacctcgag aaatatctcg acggccatgg cgaggaactg aagaagaagc tggtcggcgt
      661 cgaggcgatg gatcacccga ccgacggcga gctgctcgcg cacgcgcgca agctgttcaa
      721 ggcacacgac cgcatgacac ccaacgaccc gcgcatcgaa cgggcgatgc gcggcggcac
      781 ggcgcgaggc tagcgctcat cggaccgcgg gccggagagg cccgcggtcc gcgaagacgc
      841 tctacattcc gcccttcatt acctggccgc ggacctcgcc gcccttgtta gccgcggtgt
      901 ggacgttgaa ataccacttg ccggcggcga ggtcggccgc ctgggcatca gtcaacgtgg
      961 cctcgccctt gagcgggctc gccatcgcgc ccgccaccgg cacgacgatg ccggcgttgg
     1021 tcttggcgtc ggccgggccg tggaagtggg ccgccgtcgc tggccccgtc aggtccttgt
     1081 aggtcgccgt gtaggtcagc ttcttggtgg ccgtgtcata agtcgcggtc agcgcaccgc
     1141 tggccttgcc gtcaacgggc ggcacttcgg ccgaggattt gagatcggcc ttgtacatga
     1201 ccatttcagc gaacgccgcc ggcgcaaagg cgagcatcga caccgccatc agaccggcca
     1261 gaccggaacg aatcagcatt gagttcatga cgacttcctc cctgattggg gccggcatta
     1321 tgccaccgac caccatcagg cacgggcatc acaatggctt gaggagacta tcgaaaatcg
     1381 atcaattcgg cgccgtcgat cacataacgg gcatagcgga agtcgcggac atgaagcagg
     1441 cgttcgccag cccagtaaag caggatgaaa taaagcggcg cgccgccggg atcgtcggga
     1501 tggtggacca ggacggccgg cctccgttcg accaagcccg ggaccaggcg ccagtcgctc
     1561 gactggccgt agttgccaaa gtagcggcct gcctggctgc gtccgctgag gcgcgtg
//
LOCUS       DASWGA010000394         2282 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1310336, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000394 DASWGA010000000
VERSION     DASWGA010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1310336"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..922
                     /locus_tag="VF991_09490"
     CDS             <1..922
                     /locus_tag="VF991_09490"
                     /inference="COORDINATES: protein motif:HMM:NF012618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HEX9556715.1"
                     /translation="LGDGRVRLLPADINAAETPAGDSLHGGAVLTLVGDPAGDGFVSG
                     GDDGRLLRIAGDGTATELANQKGKWFEHLAAHRATGAIAASAGKSAFVVKAGEVREFG
                     PHPSTVADLDFSKDGSRIACAHYGGVTVWSIGQVTLPPRRFAWRGSHVALRWSTDGKF
                     IATGTQENDIHVWRMAQATDMRMQGYPAKVKSLSWTADARFLYTSAQPVFTAWPFSGK
                     GPEGKPPLQFGEEGAGLLAVVAAHPAAEFVAGGYDSGELQLGDIKTRRSVVLKMADGS
                     AISCLAWSPDGYKLAVGNEGGALLVVDLKR"
     gene            complement(919..2133)
                     /locus_tag="VF991_09495"
     CDS             complement(919..2133)
                     /locus_tag="VF991_09495"
                     /inference="COORDINATES: protein motif:HMM:NF008314.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA];
                     GO_process: GO:1990961 - xenobiotic detoxification by
                     transmembrane export across the plasma membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HEX9556716.1"
                     /translation="MTATATRPTLTPLLLVLLALLSSFTPLSIDMYLPALPVIAVDLH
                     GTVGDIQLTLSAFMIAFGTGQIFYGPAGDRFGRRPVILGGLAVYVLASVGCAFAAEAG
                     ELVILRFLQGLAACGGVVLARTMVRDLAERDQAARAMSLMMACTSIAPMLAPLIGGQI
                     LWFLGWRAIFWVLAVIGVAALVAAWLRLPETLRPEYRQPLVLSSVLKRFGQLLRHRAF
                     MGYAFTSTFQFSALLSFLSGSPFVFIERYGVAPRAYGLIFGGMVVFMTLGSLLNAKFA
                     PVFGAGRILRYAVIVPAIVGPAALIMGLIEARYGTIGMWPFLLCFAPQIATISLIGPN
                     SMAMALQRYPHMAGTASSLMGVMQFGIGAVFGAIVGQALDGTIAPMTTAMGIAGALCL
                     LSHRLLVRGDQR"
BASE COUNT          422 a          767 c          791 g          302 t
ORIGIN      
        1 gctcggcgac gggcgcgtgc gcctgctgcc ggccgacatc aacgccgccg aaacaccggc
       61 tggcgattcg ctgcatggcg gcgcggtgct gacgctggtc ggtgatccgg cgggcgacgg
      121 attcgtgagc ggcggcgacg acggccggct gctgcgcatc gccggcgatg gcacggcgac
      181 cgagcttgcc aaccagaaag gcaagtggtt cgagcatctc gcggcgcatc gcgcgaccgg
      241 cgccatcgcc gcctctgccg gtaagagcgc cttcgtcgtg aaggccggcg aggtgcgcga
      301 gttcggccct caccccagca cggtggccga cctcgacttc agcaaggacg gcagccgcat
      361 cgcctgcgcc cattacggcg gcgtcacggt atggagcatc ggccaggtca ccctgccgcc
      421 gcgccgcttc gcctggcgcg gcagccacgt ggcgctgcgc tggagcaccg acggcaagtt
      481 catcgccacc ggcacgcagg aaaacgacat ccatgtctgg cgcatggcgc aggccaccga
      541 catgcgcatg caaggctatc ccgccaaggt gaaatcgctg tcctggaccg ccgacgcgcg
      601 ctttctctac acctcggccc agccggtctt caccgcctgg ccgttctccg gcaaggggcc
      661 ggaaggcaag ccgccgctgc agttcggcga ggaaggcgcg ggccttttgg ccgtggtggc
      721 cgcccatccg gcggccgaat tcgtggctgg cggctacgat tcgggcgagc tgcagcttgg
      781 cgacatcaag acccgccgct cggtggtgct gaagatggcc gacggctcgg ccatcagctg
      841 cctcgcctgg tcgcccgacg gttacaagct cgccgtcggc aatgagggcg gcgctcttct
      901 ggtggtggat ctcaagcgtt agcgctggtc accgcgcacc agcaatcgat gcgacaacag
      961 gcagagcgcg ccggctatgc ccatggccgt ggtcatgggc gcgatggtgc cgtcgagggc
     1021 ctggccgacg atggcgccga acaccgcgcc gatgccgaat tgcatgacgc ccatcagcga
     1081 cgacgcggtg cccgccatgt gcggatagcg ctgcagcgcc atcgccatcg agttgggccc
     1141 gatcaggctg atggtggcga tctgcggcgc gaagcagagc aggaagggcc acatgccgat
     1201 ggtgccgtag cgtgcctcga tcaggcccat gatcagcgcc gccgggccga cgatggccgg
     1261 cacgatcacc gcatagcgca ggatgcgccc ggcgccgaac accggcgcga acttggcgtt
     1321 caaaaggctg cccagggtca tgaacacgac catgccgccg aagatcaggc cgtaggcgcg
     1381 cggcgccacg ccgtagcgct cgatgaacac gaacggcgac ccggacagga acgacaacag
     1441 cgccgaaaac tggaaggtgc tggtgaaggc gtagcccata aaggcgcggt ggcgcaaaag
     1501 ctggccgaag cgcttcagca ccgaggaaag caccaacggc tggcgatatt ccggacgcaa
     1561 ggtttcgggc aggcgcaacc aggcggcgac gagagccgcc acgccgatca ccgccagcac
     1621 ccagaagatt gcccgccagc cgaggaacca taggatctgc ccgccgatca gcggcgccag
     1681 catgggcgcg atcgaggtgc aggccatcat cagcgacatg gcgcgcgccg cctgatcgcg
     1741 ctcggcgaga tcgcgcacca tggtgcgcgc cagcaccacg ccgccgcagg cggccaggcc
     1801 ttgcaggaaa cgcaggatca cgagctcgcc ggcctcggct gcaaaggcgc agccgacgct
     1861 cgccagaacg tagacggcga ggccgcccag gatgaccgga cgcctgccga agcgatcgcc
     1921 cgccgggcca taaaagatct ggccggtgcc gaaggcgatc atgaaggccg acaaagtgag
     1981 ctggatatcg cccaccgtgc cgtgcaaatc gacggcgatc accggcaacg ccggcaggta
     2041 catgtcgatg gagagcggcg tgaacgacga cagcagcgcg agcaggacca gcagcagcgg
     2101 cgtcagggtc ggacgggttg ccgtggcggt catcggtttt gtcgtagcag cattggtcgc
     2161 acggtcccat gctataagcg gaccatgacg acgctgcccg agctcaccga gccgcagatc
     2221 cgccgctatg ctcgccacat cgtgctggcc gagattggcg gcgtcggcca agcgcggctg
     2281 at
//
LOCUS       DASWGA010000395         1554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1694246, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000395 DASWGA010000000
VERSION     DASWGA010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1694246"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VF991_09500"
     CDS             <1..312
                     /locus_tag="VF991_09500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007789028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556717.1"
                     /translation="GTWFKRGETAVLLFLASSLPLFFLVGVSWPVEAIPGPLRMASLV
                     FPSTSAIDGLVRINQMGATLSDVFRDWIVLWALAALYGLLAVLAARFFVREGTSYGRA
                     S"
     gene            296..1282
                     /locus_tag="VF991_09505"
     CDS             296..1282
                     /locus_tag="VF991_09505"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX9556718.1"
                     /translation="MDAHRRRRLIVGLAGAAALAAVAFAVLVPRHAAAPPSLAGMVRQ
                     TEIRIAPEITGRLTSVAVHAGQAVRKGELLAQLDNPELAASLGEAKAAAASARAERAH
                     IYAGMRDEERAILARSVETAETNLLLAEQEDARAVALAARDFASKQKLDESNASLAKA
                     RADLDLKRAQLAAARAGPTAEERALADARVVLAEATVADLQAKLDKTKLVAPVDGVVG
                     ILVAEPGEVVPVGKPVLTLEVGNERWFSFTLREDALGRLAVGSTVTLATDDGRRIPAR
                     VTELRPLGEFATWRAARAVGDHDLNSFRLRLDPVAAEDKLQPGMTVWLAGNS"
     gene            1309..>1554
                     /locus_tag="VF991_09510"
     CDS             1309..>1554
                     /locus_tag="VF991_09510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel protein"
                     /protein_id="HEX9556719.1"
                     /translation="MGELTLTQIAADPFVQTGVLAVVGVIVTHILLRRYPARRLVFQF
                     VLFVALTILLYRHDIVPYEIAPDTTPAFQRIFVALAKI"
BASE COUNT          217 a          549 c          534 g          254 t
ORIGIN      
        1 ggcacgtggt tcaagcgggg tgagacggcg gtcctgcttt tcctcgcctc gagcctgccc
       61 ctgttcttcc tcgtcggcgt gtcgtggccg gtcgaggcga tccccggccc actcaggatg
      121 gcgagcctcg tcttccccag cacgtcggcg atcgacggcc tggtgcgcat caaccagatg
      181 ggcgctacgc tgagcgacgt tttccgggac tggatcgtct tgtgggcgct cgccgcgctc
      241 tacggcctgc tcgccgtcct ggccgcccgg tttttcgtcc gcgaagggac ttcgtatgga
      301 cgcgcatcgt aggcgacgtc tcattgtcgg ccttgccggc gccgcggcgc tggcggccgt
      361 ggcattcgcc gtcctcgtgc cgcgacacgc ggcggcgcca ccgtcgctcg ccggcatggt
      421 gcgccagacg gagatccgca tcgcgccgga gatcaccggg cgtctcacct ccgttgccgt
      481 ccatgccggc caggcggtcc gcaagggcga gcttttggcg cagctcgaca atcccgaact
      541 ggcggcatcg ctgggcgagg cgaaggcggc ggccgccagc gcgcgggccg aacgggccca
      601 catctatgcc ggcatgcgtg acgaggaacg agcgatcctc gcgagaagcg tggagaccgc
      661 cgagaccaac ctgctgctgg ccgagcagga ggacgcccgc gcggtcgcgc tggcggccag
      721 ggacttcgcc agcaagcaga agctcgacga gagcaatgcg tcgctcgcca aggcgcgggc
      781 cgacctcgac ctcaagcgcg cccagctcgc cgccgcgcgc gccgggccga ccgccgagga
      841 gcgcgcgctg gccgacgccc gggtggtgct cgccgaggcg acggtcgccg acctgcaggc
      901 gaagctcgac aagaccaagc tggtggcgcc ggtcgacggc gtcgtcggca tcctggtcgc
      961 cgaaccgggc gaagtcgttc ccgtcggcaa gccggtgctc accctggagg tgggcaacga
     1021 gaggtggttc tccttcaccc tgcgcgagga tgcgctgggc cgccttgcgg tcggctcgac
     1081 cgtcacgctc gcgaccgacg atggccggcg catccccgcg cgggtcacgg agctgcggcc
     1141 gctcggcgaa ttcgccacct ggcgcgccgc gcgcgccgtc ggcgaccatg atctcaacag
     1201 cttccgtctg cggctcgatc cggtcgcggc cgaggacaag ctgcagccgg gcatgaccgt
     1261 gtggctggct ggcaattcat aggaatgcca tcataggaac aatgggcgat gggtgagttg
     1321 accctgacgc agatagccgc cgatccgttc gtgcagaccg gcgtgctcgc cgtggtcggc
     1381 gtgatcgtca cccacatcct gctgcgccgc tatcctgccc ggcgcctggt tttccagttc
     1441 gtgttgttcg tggcgctgac catcctgctg taccgccatg acatcgttcc ctacgaaatc
     1501 gctcccgaca ccacgccggc attccagcgc atcttcgtcg ccctggcgaa gatc
//
LOCUS       DASWGA010000396         4252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2074808, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000396 DASWGA010000000
VERSION     DASWGA010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4252
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2074808"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /locus_tag="VF991_09515"
     CDS             <1..834
                     /locus_tag="VF991_09515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heterodisulfide reductase-related iron-sulfur
                     binding cluster"
                     /protein_id="HEX9556720.1"
                     /translation="LRAMLEAVPDRLAGPSPVDRPQTFPAAGLRRKRVALMPGCGQQV
                     LAPEVNEATVRLLTRHDMEVVNVAGSGCCGSSVMHVGRKQEALAFAKRNIEAWLREID
                     GTGLDAIVINASGCGTTVKDYGHMLADDPVWKDRAAQVAGLAKDVSELMLDVGLANVT
                     VRPLTVAYHSACSMQHGQKVIEQPKKLLRDAGFIVKDVPEGHICCGWAGTYQLLQPEL
                     SRRLRDRKVANIASVQPDIIAAGNFGCIGNIAGGTGIPVAHTVELLDWATGGPRPPAL
                     Q"
     gene            842..1438
                     /locus_tag="VF991_09520"
     CDS             842..1438
                     /locus_tag="VF991_09520"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9556721.1"
                     /translation="MTCFRACFAALLGVMLGINALAQNGGSNTMLETLFAKLQTATDP
                     VAVQSLEAAIWEQWTMVPEGRQRELMMRGIVEMQQRQLKVSVDTFSKLIEIAPDLSEA
                     WNKRATAYWLLGNFPASLSDICETLKREPRHFGAYSGLGMIRAEMGEYPRAAAAFELA
                     RKYNPHIIGIDEEIDRLKAMGGDEPSDPLGCNQRTAGR"
     gene            1511..2746
                     /locus_tag="VF991_09525"
     CDS             1511..2746
                     /locus_tag="VF991_09525"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9556722.1"
                     /translation="MATLYVGGRLFDGDKVQDGHAVLEEGGKVKRVAPAAEFAGFAGE
                     TVDTSGGTLIPGMIDCHVHSLSGAEGNPGAAQDRMSAAEITVRGMEFMRNTLEGGITA
                     VRDCGGKDYIEFAIRDALNAGRFLGPTMRCAGRMICMTGGHGNRTGRVADGADEVVKA
                     VREQIHAGSDLIKIMATGGVMTPGVNPEDAHYSAEEMKAGISEAHRFHRCCASHAQGA
                     LGILNAVRGGIDSIEHGIFMTEECIIEMKERGVWLVPTLAAVKNILKGYDDGDRSIPD
                     YVIDKARRVFDRHIASIKMYYKAGGRIAMGTDAGTPHNRHGENARELEYMCEIGVSPR
                     DSLFFSTASAADLMRLADQGRIKDGNSADFVLCDGDVLADIKRAARKENHRLVVKRGL
                     VAKDNRAAFVRHATRVAAE"
     gene            2777..>4252
                     /locus_tag="VF991_09530"
     CDS             2777..>4252
                     /locus_tag="VF991_09530"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HEX9556723.1"
                     /translation="MDEIFLILLGIAWALGTPLIAIVALVRTAGLRAQNERLAADLAG
                     LRRQIAEGVELPPPFVAPAAEIAPPPAPPFEPEPAPEAEITPPPPPVVAQPLSVGWEQ
                     RLGARAFLWIGAITLALAAIFLVRYSIEEGYLSPEVRVILAALFGFALIGGAERMRTR
                     DDRVAQALAAAGVASLYGALFAAVALYEMISKVAAGGGAAALTAFAIGVSLRHGMFVA
                     GLAFVGGFVSPAIIGSETPNTPVLFGYLLAIAAGTLGVIRARGWWPLGWGVLAGSAIW
                     TVVWMLSLAGGLHWVGLFLVAVAGLFVWTTWRRMGESENPPADVVALVWTALGLSGFL
                     LVAVIVQDHGEQNAGWLALALHGAGLYALGRWTPRFQHAAGLAPLLSIAALVLWWSTT
                     RVVAAGWDADRFAWVAILFGGVYAAAAFALMWNAARPGFWAALSVAAALAHFLLCWYV
                     LRGVASGAPWGLISIGLAVPFLVGAERLTHWRETMTGATEAL"
BASE COUNT          635 a         1423 c         1496 g          698 t
ORIGIN      
        1 ctgagggcca tgctggaggc ggtgcccgat cggctggccg ggccgtcgcc ggtcgaccgg
       61 ccgcagactt ttccggccgc cggtctgcgg cgcaagcgcg tggcgctgat gccgggctgc
      121 ggccagcagg tgctggcccc cgaagtcaac gaggcgacgg tgcgactgct gactcgtcac
      181 gacatggaag tcgtgaacgt ggcgggctcc ggttgctgcg gctcctcggt gatgcatgtc
      241 ggccgcaagc aggaggcgct ggcgttcgcc aagcgcaaca tcgaggcctg gctcagggag
      301 atcgacggta cgggtctcga cgccatcgtc atcaacgcct cgggctgcgg caccacggtg
      361 aaggactacg gtcacatgct ggccgacgac ccggtgtgga aggacagggc cgcgcaagtg
      421 gcgggtcttg ccaaggacgt gagcgagctc atgctcgatg tcggtctcgc gaacgtgacg
      481 gtgcggccgc tcaccgtggc ctatcattcg gcctgttcca tgcagcatgg ccagaaggtg
      541 atcgagcaac ccaagaagct gctccgcgat gcgggcttca tcgtcaagga cgtgcccgaa
      601 ggccatatct gctgcggctg ggccggcacc taccagctgc tgcagcccga attgtcgcgc
      661 cgcctgcgcg atcgcaaggt cgccaacatc gcgagcgtcc agcccgacat catcgccgcc
      721 ggaaatttcg gctgcatcgg caacattgcc ggcggcactg gcattccggt tgcacacacc
      781 gtcgagttgc tcgactgggc gaccggcgga cccaggccgc cggctctgca ataggaacgc
      841 catgacctgc tttcgcgctt gctttgccgc actgctcggc gtgatgctgg ggatcaacgc
      901 gctggcacaa aacggcggga gcaacaccat gctcgagacc ttgtttgcca agctacagac
      961 cgcgaccgat cccgtggcag tccagagcct ggaagcagcg atctgggaac agtggaccat
     1021 ggttcccgag ggccggcagc gcgagctgat gatgcgcggc atcgtcgaga tgcagcagcg
     1081 ccagctgaaa gtctcggtcg acactttcag caagctgatc gagatcgcgc ccgacctttc
     1141 cgaggcctgg aacaagcggg cgacggccta ttggctactc ggcaactttc cggcctcgct
     1201 gtccgacatc tgcgagaccc tgaagcgcga gccgcgccat ttcggcgcct attcgggtct
     1261 tggcatgatc cgcgcggaaa tgggcgagta tccgcgcgcc gccgcggctt tcgagctggc
     1321 gcgcaaatac aatccccaca tcatcggaat cgacgaggag atcgaccgcc tgaaggcgat
     1381 gggcggcgac gagccatccg atcccctggg ctgcaaccag cgcaccgccg gtcgttaggc
     1441 agtcgccagt ccttgccgcg cgggatgggc gcaggcaaag ttccggcacg tttcaatcag
     1501 gagtgggtca atggccacgt tgtatgtcgg tggccgtctg ttcgacggcg ataaggtgca
     1561 ggacgggcac gcggtgctgg aggagggcgg caaggtcaag cgcgtggcgc cggcggccga
     1621 gttcgcgggc ttcgccggcg agacggtcga cacatcgggc ggcacgctga tccccggcat
     1681 gatcgactgc catgtccact cgctgtccgg cgccgaaggc aatcccggcg cggcccagga
     1741 ccgcatgagc gccgccgaga tcacggtgcg cggcatggag ttcatgcgca acacgctgga
     1801 aggcggcatc accgccgtgc gcgactgcgg cggcaaggac tatatcgaat tcgccatccg
     1861 cgacgcgctg aacgccggcc gcttcctcgg accgaccatg cgctgcgccg gccgcatgat
     1921 ctgcatgacc ggcggccacg gcaaccgcac cggcagagtg gcggatggcg ccgatgaggt
     1981 ggtcaaggcg gtgcgcgagc agatccatgc cggttccgac ctgatcaaga tcatggcgac
     2041 cggcggtgtg atgacgccgg gcgtcaatcc cgaggacgcc cactactcgg ccgaggagat
     2101 gaaggccggc atcagcgagg cgcatcgctt ccacagatgc tgcgccagcc atgcccaggg
     2161 cgcgctcggt atcctgaatg ccgtgcgcgg cggcatcgat tcgatcgagc acggcatctt
     2221 catgaccgag gagtgcatca tcgagatgaa ggagcgcggc gtgtggctgg tgccgacgct
     2281 cgccgccgtg aagaacatcc tcaagggcta cgacgacggc gatcgctcga tccccgacta
     2341 cgtgatcgac aaggcgcgcc gcgtgttcga ccgccacatc gcctcgatca agatgtacta
     2401 caaggcgggt ggccgcatcg ccatgggcac cgacgccggc acgccgcaca accgccatgg
     2461 tgagaatgcg cgcgagctcg aatatatgtg cgagatcggc gtctcgcccc gcgattcgct
     2521 gttcttctcg acggcgagcg ccgccgatct gatgcggctg gccgaccagg gccgcatcaa
     2581 ggacggcaac agcgccgact tcgtgctgtg cgacggtgac gttttggccg acatcaagcg
     2641 cgccgcgcgc aaggagaacc atcgcctggt ggtgaaacgc gggctcgtcg ccaaggacaa
     2701 ccgcgcggcg ttcgttcgac acgccacccg cgtcgcggcc gagtagccgg gagcgcgtgc
     2761 gggcctcggg atcaccgtgg acgaaatctt cctgatcctg ctcgggatcg cctgggccct
     2821 cggcacgccg cttattgcca tcgtggcgct ggttcggacg gcgggtctgc gtgcccagaa
     2881 cgagcggctg gccgccgacc ttgccgggct gaggcggcag atcgcggagg gcgtcgagct
     2941 gccgccgcct ttcgtcgccc cggcggccga gattgcgccg ccgccggcgc cgcccttcga
     3001 accggagccc gcgcccgagg ccgagatcac gccgccgccg ccgccggttg tcgcccagcc
     3061 gctcagcgtc ggctgggagc agcgcctggg cgcgcgggcc ttcctgtgga tcggcgcgat
     3121 caccctggcg ctcgcggcga tcttcctggt gcgctactcg atcgaggagg gctatctctc
     3181 gcccgaagtg cgcgtgatcc tggcggcgct gttcggcttc gccctgatcg gtggcgccga
     3241 acggatgcga acgcgcgacg atcgcgtcgc ccaggcgctg gccgccgccg gcgtcgcgtc
     3301 gctctacggc gcgctgttcg ccgccgtggc gctctacgag atgatctcca aggtcgcggc
     3361 cggcggcggt gcggcggcgc tcaccgcctt cgccatcggc gtctcgctgc gtcacggcat
     3421 gttcgtggcg ggcctcgcct tcgtcggcgg cttcgtgagc ccggccatca tcggcagcga
     3481 gactcccaat acgcccgtgc tgttcggcta cctgctggcg attgccgcgg gcaccttggg
     3541 cgtcatccgc gcgcgcggct ggtggccgct cggctggggc gtgctggcag ggtcggcgat
     3601 ctggaccgtc gtctggatgc tgtcgctggc cggcgggctg cattgggtcg gcctgttcct
     3661 ggtggcggtg gccggcctgt tcgtctggac gacctggcgg cgcatgggcg agagcgagaa
     3721 tccacctgcc gacgtcgttg ccctcgtctg gacggcgctc ggcctcagcg gcttcctgct
     3781 ggtggccgtc atcgttcagg accatggcga gcaaaacgcc ggctggctgg cgctggcgct
     3841 gcatggcgcg ggcctctatg cgctcggccg ctggacgccg cgcttccaac acgccgcggg
     3901 cctggcgccg ctgctgtcga tcgcggcact tgtgctgtgg tggagcacga cgcgcgtcgt
     3961 ggccgcgggc tgggatgccg accgctttgc ctgggtcgcc atcctgttcg gcggcgtcta
     4021 cgccgcggcc gccttcgcgc tgatgtggaa cgcggcccgg ccgggctttt gggcagcgct
     4081 ctcggttgcc gcggcgctcg cgcacttcct gctctgctgg tacgtgctgc gcggcgtggc
     4141 cagcggcgcg ccgtggggcc tgatcagcat cggactcgcc gtgcccttcc tggtcggcgc
     4201 cgaacgcctg acgcactggc gcgagacgat gaccggcgcc accgaggcgt tg
//
LOCUS       DASWGA010000397         2908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1694925, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000397 DASWGA010000000
VERSION     DASWGA010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1694925"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            107..901
                     /locus_tag="VF991_09535"
     CDS             107..901
                     /locus_tag="VF991_09535"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556724.1"
                     /translation="MKRVALGRRVLVLAGAAIYLFLMLPLLVVFPISLSSAPYMQFPP
                     PGLSWQWYERFVGDPQWIDATWRSLYIGAATAVLALALGVPLAFSLVRGAFRGRTLLD
                     RLALAPIIVPTIILSVAVYGLFAKLKLIGAWYGLVVAHTVLALPFVVLVMTAGLRDFD
                     RRLEQAAEGLGASRWRTLGRITLPLLRPSLVSAGLLAFISSFDELVVALFLAGPNMTL
                     PKKMFDNILMEIDPTIAAVSVMQILLVALVMVLIGRFGRGLSGSAR"
     gene            913..2253
                     /locus_tag="VF991_09540"
     CDS             913..2253
                     /locus_tag="VF991_09540"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9556725.1"
                     /translation="MAESVFHKDFKAMPWWWEWWHPTNELSQDPPRKTDVLVVGAGYG
                     GLSTALELARSGVEVTVLERGDFGVGASTRNGGAVSGGTNLGKGFSGKGVERDPEEWK
                     KAMARMLADGAESLTQVQTVIEREGIECYWRLWGRFVGAYTPRHYRDYEAKVGTYNAS
                     AGAGTRMVPRERQREEIASDYYYGGMVVDRSGQLHPALYYGGLLKAAQRAGARLCAEC
                     DAEKIERKPKGSGGGFRVLTSKGSIEAREVVIATNGYTGDVTPTLKRRLVPVASHIIA
                     TEEIAEDLAKSLIPKGRTISDSKRVLCYYRLSPDNKRVIFGGRARFTQVPPEVSAPVL
                     HGYMVERWPQLKGTKVTHAWTGNVAFAFDYVPHMGTEQGMHYLMACNGSGVAMMSYLG
                     YQTARKIAGGSNAPANAFDERPFPTMPFYSGNPWFLPMVGAWYRTRDWWDRQTA"
     gene            2273..>2908
                     /locus_tag="VF991_09545"
     CDS             2273..>2908
                     /locus_tag="VF991_09545"
                     /inference="COORDINATES: protein motif:HMM:NF012548.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine-type phosphatase"
                     /protein_id="HEX9556726.1"
                     /translation="MNLRVLVFALVLALPGGLSSAHAQIPPVPPGWQLERAVLLNRHG
                     VRAPIEANAELDQHVATAWPTWPVPPSFLTPRGAELMRLMGAYYRVLYGGRGLVQADD
                     CPPAGTVAAWSDIDQRTRVSGVSLLAGMYPRCANLAPRNQNDPSVPDPLFHPGPSPSC
                     PMDAATNRAAILARIGGDFSSVMREYAPQLAAMQAVLCPTGVATGARRCGLS"
BASE COUNT          420 a         1000 c          999 g          489 t
ORIGIN      
        1 agacgctgaa ctggccgttt gccgcggcgc tgtcggccgt gctgctggcc ttcacgctcg
       61 cggtctatac gctggcccag cgcttcacgc gcaccgaggc ccactcatga aaagagtggc
      121 cctgggccgc cgcgtgctcg tgctggccgg cgcggcgatc tatcttttcc tgatgctgcc
      181 gctgctggtg gtgttcccga tctcgctgag ctcagcgccc tacatgcagt tcccgccgcc
      241 cggcctttcc tggcagtggt acgagcgctt tgtcggcgac ccgcaatgga tcgatgccac
      301 ctggcgctcg ctgtacatcg gtgcggcaac cgcggtgctg gccctggcgc tcggcgtgcc
      361 gctggccttc agcttggtgc gcggcgcgtt ccgcggacgg accctgctcg accgcctggc
      421 gctcgcaccc atcatcgtgc ccaccatcat cctgtcggtt gccgtctatg gcctgttcgc
      481 caaattgaag ctgatcggcg cgtggtacgg gctggtcgtg gcgcacaccg tgctggcgct
      541 gcctttcgtc gtgctggtga tgacggccgg cctgcgcgat ttcgaccgca ggctggaaca
      601 ggccgccgag ggcttgggcg ccagccgctg gcggacgctc ggccgcatca ccctgccgct
      661 gctccggccc agcctggtct cggccggctt gctcgccttc atctcctcgt tcgacgagct
      721 ggtggtggcg ctgttcctgg ccgggccgaa catgacgctg cccaagaaaa tgttcgacaa
      781 catcctgatg gaaatcgatc ccaccatcgc cgccgtgtcg gtgatgcaga tcctgctggt
      841 ggcgctggtg atggtcctga tcggtcgctt cggccggggc ctgagcggca gcgcgcgttg
      901 atggagcgag aaatggccga gtcggtgttc cacaaggatt tcaaggcgat gccgtggtgg
      961 tgggaatggt ggcatcccac caacgagctg tcgcaggacc cgccgcgcaa gaccgacgtg
     1021 ctggtggtcg gcgcaggcta cggcgggctg tcgacggcgc tcgagctggc gcgctcgggt
     1081 gtcgaggtca cggtgctgga gcgcggcgat ttcggcgtcg gcgcctcgac gcgcaacggc
     1141 ggcgccgtca gcggcggcac caatctcggc aagggcttct cgggcaaggg cgtcgagcgc
     1201 gatcccgagg aatggaagaa ggccatggcc cgcatgttgg ccgatggcgc ggagtcgctg
     1261 acgcaagtcc agaccgtgat cgagcgcgag ggcatcgagt gctactggcg cctgtggggt
     1321 cgcttcgtcg gcgcctatac gccgcgccac tatcgcgact atgaagccaa ggtcggcacc
     1381 tacaatgcca gtgccggagc gggcacgcgc atggtgccgc gcgagcgcca gcgcgaggag
     1441 atcgcgtcgg actactacta cggcggcatg gtggtcgacc ggtcgggcca gctccatccg
     1501 gcgctctact acggcggtct cctgaaggcc gcgcagcgcg ccggcgccag gctgtgcgct
     1561 gagtgcgacg ccgagaagat cgagcgcaag cccaaaggct cagggggcgg cttccgcgtg
     1621 ctcaccagca agggatcgat cgaggcgcgc gaggtggtga tcgccaccaa cggctatacc
     1681 ggcgacgtca cgccgacgct gaaacgtcgg ctggtgccgg tggcgagcca catcatcgcc
     1741 accgaggaga tcgccgagga cctggcgaaa agcctgatcc ccaagggccg cacgatcagc
     1801 gacagcaagc gcgtgctttg ctactaccgg ctctcgcccg acaacaagcg cgtgatcttc
     1861 ggcggccgcg cccgtttcac ccaggtgccg ccggaggtca gcgcaccggt gctgcacggc
     1921 tacatggtcg agcgctggcc gcagctcaag ggcaccaagg tgacccatgc ctggaccggc
     1981 aatgtcgcct tcgccttcga ctacgtgccg cacatgggca ccgagcaggg catgcactac
     2041 ctcatggcct gcaacggctc gggcgtcgcg atgatgagct atctcggcta ccagacggcg
     2101 cgcaagatcg ccggcggctc caacgcgccg gccaacgcct tcgacgagcg cccgttcccg
     2161 accatgccgt tctactcggg caacccctgg ttcctgccca tggtcggcgc ctggtacagg
     2221 acgcgtgact ggtgggaccg ccagacggca taatgcggtc cgggggagtt ccatgaactt
     2281 gcgcgttcta gtttttgcgt tggtcttggc gttgccgggc ggcctgtcgt cggcccatgc
     2341 ccagatcccg ccggtgccgc cgggctggca gctcgaacgg gcggtgctct taaaccgcca
     2401 tggcgtgcgc gcgcccatcg aggcgaacgc cgagctggac cagcacgtcg ccacggcgtg
     2461 gcccacctgg ccggtgccgc caagcttcct cacgccgcgc ggcgccgagc tgatgcggct
     2521 gatgggcgcc tactaccgcg tgctctatgg cgggcgcggg ctggtgcagg ccgacgattg
     2581 cccacccgcc ggcacggtcg cggcgtggtc cgacatcgac cagcgcacgc gggtgagcgg
     2641 cgtgtcgctg ctcgccggca tgtacccgcg ctgcgccaac ctcgcgccgc gtaaccagaa
     2701 cgacccgtcg gtgcccgatc cgttgttcca tcctgggccc tcgccgtcct gcccgatgga
     2761 tgccgccacc aaccgcgcgg caatcctggc gcgcatcggc ggcgacttca gctcggtgat
     2821 gcgcgaatac gccccgcagc tcgccgccat gcaggcggtc ctgtgcccaa ccggcgtggc
     2881 aaccggcgcc cggcgctgcg gcctgtcg
//
LOCUS       DASWGA010000398         4676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1567214, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000398 DASWGA010000000
VERSION     DASWGA010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4676
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1567214"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VF991_09550"
     CDS             complement(<1..569)
                     /locus_tag="VF991_09550"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HEX9556727.1"
                     /translation="MAIKTKRDFGPVRAAALVGVVLAGGEGRRMGPGLLKPLRPLGGR
                     PMVVHVVERLRPQVMDLVVVANDPLPGLRALKVPVISDPPDLQRAARREGRRLGPLAG
                     ILAGMEWARAHHPHAGWILTAPTDVPFLPLDLTVRLCGLMHVPEPDVLMVRHGNRLEH
                     GLAVWSVRLAGDLRRAILEEGVRRVEEFAR"
     gene            617..1417
                     /locus_tag="VF991_09555"
     CDS             617..1417
                     /locus_tag="VF991_09555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556728.1"
                     /translation="MAFSIGKVANWIHSVDKSRAVVAWWPPQYMAEDERTAYKVQDAF
                     LKKLVPKQGPVVGYKIGLTAPQIWEQTGLRSPAYGPIRRKRVFEHKASIRADRWTRLG
                     VELEIILTVNSDVPAPKATPYDKDSIAPYVGDARAGFELIEDRGADYSRLTAIALIMD
                     VGWNGGSLLAKPNKNWRDLDLGNLNGSIAFDGAVVRTGHSGDVMGHCYNSLAWLANKL
                     GEHGKRLKKGMIVSSGSMVACQFVPPGSTAVGHIEGLGEVTLKYELPR"
     gene            1543..3210
                     /locus_tag="VF991_09560"
     CDS             1543..3210
                     /locus_tag="VF991_09560"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9556729.1"
                     /translation="MTDIRISMRVRFASGQDAANLPVQVIEVGVTTYDAGKTRSDGTI
                     DAFLRRRRQIRILWFAFDDPTDRPQLRVVISDPAGHSVQTPPLPIFVLPPEFNPSASA
                     SQALRPLVDANAPGYVFLVRKDGAVWADATRGLARANAPGVIAQDMANDTIVHLASMS
                     KPITATALVAMIDDWRNMRDAVAAMGSPGAPTQILRLGPLEIAVPSVLVPLFSDRSRA
                     AAFLHGTWLAQVHPKVRYALDAFANHGGTISPQPVAPPGYFGLLRRVIDQVAVPDDAD
                     PFLPLIRARLDPAATIGAGVDLITIGDLLTHRTDLASRPLNATLHTAAEIAAVAPSEP
                     VGGLATNDYWGFVKLLLREPCNRQPNSNYGNNNFTVLTTVIEACTDTTFDDYVTRRLF
                     FDDRFNRIRRRVVDPSQGALYYQGTAPNWTGGVLLSDYSNWPGNGGFYATANQLTDWL
                     HALYTRAPVAGVSGNAPLISAAGLSKLFDTTAFFCLGIANRLGPPDAAKRYQHNGGTG
                     PNGGSVAGNLAIIVTPSGSVYSALFVANGNVGADPPFEAAVSKLPWA"
     gene            complement(3215..3913)
                     /gene="pdeM"
                     /locus_tag="VF991_09565"
     CDS             complement(3215..3913)
                     /gene="pdeM"
                     /locus_tag="VF991_09565"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013164915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEX9556730.1"
                     /translation="MMPFDFECAGERLQALPAGALHWPARRLLAVADLHLEKGSSYAV
                     SAHKLLPRHDTRQTLAMLAALIDVLAPETVVCLGDSFHDGQAIARLPEAEHREIERLT
                     NRTRFVWIAGNHDPAPPPAGWGEVAEEISDGPLIFRHEARFGPADGEVSGHFHPVAAL
                     TVRGRGMRRRCFLTDGRRLILPAFGAYAGGLNALDPAIAQLFPDDYDALVVGRDAVRR
                     LSWRQLRPDWVMLG"
     gene            complement(3910..4575)
                     /locus_tag="VF991_09570"
     CDS             complement(3910..4575)
                     /locus_tag="VF991_09570"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX9556731.1"
                     /translation="MRGALAAAPSRRAYSARCGCTWAAAPKGQSTAEPRTKHTRRRIA
                     PPCARGGIRSIVRTMSLRRIVAAFRRGKPPDMAPAAAQADLVEIFKGERRMELKREGR
                     LLKRYRVALGFAPERHKEREGDGRTPEGRYSIDARNPKSAFHLSLRVSYPDDKDRAQA
                     QSLGVAPGGDIYIHGQPNGWRKLFVGYPRNDWTTGCIAVSDADIREVWSLVPTGSDVV
                     IHP"
     gene            4484..>4676
                     /locus_tag="VF991_09575"
     CDS             4484..>4676
                     /locus_tag="VF991_09575"
                     /inference="COORDINATES: protein motif:HMM:NF020478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1849 family protein"
                     /protein_id="HEX9556732.1"
                     /translation="MLWPLGAAAQVQPHRAEYALRLGAAANAPRIGTAVYDLAQDCAG
                     WHLKRDITTEIALTTSWRMS"
BASE COUNT          798 a         1630 c         1496 g          752 t
ORIGIN      
        1 cgggcgaact cctcgacccg gcgcacgccc tcctcgagga tcgcgcgcct gagatcgcca
       61 gcgagcctta ccgaccagac cgccagacca tgttccaacc gattgccatg ccgcaccatc
      121 agcacgtcgg gctccggcac gtgcatcagg ccgcacagcc gcaccgtcag atcgagcggc
      181 aggaacggca cgtcggtcgg cgccgtcagg atccagccgg catgcggatg gtgcgcgcgc
      241 gcccattcca tgccggccag gatgccggcg agcggcccca ggcgcctgcc ctcgcgccgg
      301 gcggcgcgct gcaggtcggg cggatcggag atcaccggca ccttgagcgc gcgcaggccc
      361 ggcaggggat cgttggccac gaccaccagg tccatgacct gcggccgcag ccgctccacg
      421 acatggacca ccatcggccg gccgccgagc ggccgcagcg gcttcagcag ccctggcccc
      481 atgcgccggc cctcgccgcc tgccagcacg acgccgacca gcgccgccgc tcttaccggc
      541 ccgaaatccc gcttcgtctt gatcgccatg ggctgcacta tgcggggcac aagcgtccaa
      601 gcaaggggag gaagacatgg cgttcagcat cggcaaggtc gcgaactgga tccattcggt
      661 cgacaagtcg cgcgccgtcg tcgcctggtg gccgccgcag tacatggccg aggacgagcg
      721 caccgcctac aaggtccagg acgcgttcct gaagaagctc gtgcccaagc aaggcccggt
      781 cgtgggctac aagatcgggc tgaccgcgcc gcagatctgg gagcagaccg ggctgcgcag
      841 cccggcctac ggcccgatcc gccgcaagcg cgtgttcgag cacaaggcca gcatccgcgc
      901 cgaccggtgg acgcggctgg gcgtcgagct cgaaatcatc ctcaccgtca attcagacgt
      961 gccggcgccc aaggcgacgc cctacgacaa ggactcgatt gcgccgtacg tcggcgatgc
     1021 gcgcgccggc ttcgagctga tcgaggatcg cggcgccgac tacagccggc tgaccgccat
     1081 cgcgctgatc atggatgtcg gctggaacgg cggctcgctg ctcgccaagc ccaataaaaa
     1141 ctggcgcgac ctcgacctcg gcaacttgaa cggctcgatc gccttcgacg gcgccgtggt
     1201 gcgcaccggc cattccggcg acgtcatggg ccattgctac aattccctcg cctggctcgc
     1261 caacaagctc ggcgagcacg gcaagcggct gaagaagggc atgatcgtgt cgagcggcag
     1321 catggtcgct tgccagttcg tgccgccggg cagcacggcg gtcggccaca tcgagggcct
     1381 gggcgaggtg acgctgaagt acgagctgcc gcgttagcca tccctttcca agcacgcggc
     1441 attcggaacc cgcttgggcg aaagaatcgt ccgaacaaca cccggtaacc cttgcggact
     1501 ggcgcgtcac tactactatg gcgtgcacaa gcgggggttg ccatgaccga tattcgcatt
     1561 tcgatgcgtg tcaggttcgc cagtggacag gacgccgcca accttcccgt ccaggtcatc
     1621 gaggtcggtg tcacaaccta cgacgccggc aagacgcggt cggatggcac catcgacgcg
     1681 tttctccgcc ggcgacgcca gattcggata ttgtggttcg cgttcgacga cccgacggac
     1741 cgcccgcagc tgcgagtcgt catcagcgac ccggccggcc actcggtcca aacgcctccg
     1801 ctcccgatat tcgtgctgcc gcccgagttc aacccatcgg cgtcagccag ccaggcgctt
     1861 cggcccctcg tggacgccaa tgcgccaggc tatgtatttc tggttcgcaa agatggcgcg
     1921 gtgtgggccg acgccacacg cgggcttgcg cgcgcgaacg cgccaggcgt gattgcgcag
     1981 gacatggcca atgacaccat tgtccacttg gccagcatgt ccaaaccgat taccgccacc
     2041 gccctggtgg cgatgatcga cgactggagg aacatgcggg acgccgtggc cgccatgggc
     2101 tctcctgggg cgccgacgca gatattgcgg ctggggcccc tcgagatcgc ggttcccagc
     2161 gtcctggtgc cgctgttctc ggaccgaagt cgtgccgcgg cgtttctgca cggcacatgg
     2221 ctggcgcagg tccaccccaa agttcgctac gcgctggatg cattcgccaa ccatggcggg
     2281 accatctcgc cgcagccggt tgcgccgcca ggttatttcg gactgctgcg gcgcgtgatc
     2341 gaccaggtcg ccgtaccgga cgatgccgac ccctttctgc ctctgatccg agcacgccta
     2401 gaccccgctg caacaatcgg cgcgggggtc gacttgatca cgatcggcga cctgctcacc
     2461 catcgcacag accttgccag caggccgctg aacgcaactc tgcacaccgc cgcggaaatt
     2521 gccgcggtgg cgccctccga gccggtgggt ggcttggcga cgaatgacta ttggggcttc
     2581 gtcaaattgc tgcttcgcga accctgcaat cgccagccga attcgaacta cggcaacaac
     2641 aatttcacgg tattgaccac ggtgatcgag gcttgcactg acacgacatt cgatgactac
     2701 gtaacgcggc ggctcttctt cgatgaccgc ttcaatcgta tccggcggcg cgtcgttgat
     2761 ccaagccagg gcgcgcttta ctaccaaggg acggcgccca actggacggg tggcgtactc
     2821 ctctccgact acagcaactg gccgggcaac ggcgggttct atgcaacggc caaccaactc
     2881 accgactggc tgcacgcact gtatacgagg gcacccgtcg ccggtgtcag tggcaatgcc
     2941 cctctgattt ctgccgcggg tctttcaaag ctcttcgaca cgacggcctt cttctgcctc
     3001 ggcatagcca atcgacttgg accccctgac gccgccaagc gctatcagca caatggcggc
     3061 accggcccga acggcggctc ggtcgccggc aacctggcga tcatcgtcac gccgtcggga
     3121 tcggtgtaca gcgcgctctt tgtggccaac ggcaatgttg gcgcagaccc acccttcgaa
     3181 gctgcggtat cgaagctgcc ttgggcgtga cagctcagcc caacatcacc caatccggcc
     3241 gcaactgccg ccacgacagc cgccgcacgg cgtcgcggcc gaccaccaat gcgtcgtagt
     3301 cgtcggggaa gagctgcgcg atcgcgggat cgagggcgtt cagcccaccg gcataggcgc
     3361 cgaaggcggg cagaatcagc cgtcttccat cggtcaggaa acagcgccgg cgcatgccac
     3421 ggccgcgcac cgtgagcgcc gccacgggat ggaagtggcc cgagacttcc ccgtcggccg
     3481 ggccgaagcg cgcttcgtgg cggaagatca agggaccgtc gctgatctcc tcggcaacct
     3541 cgccccagcc ggccggcggc ggcgccggat catggttgcc ggcgatccac acaaagcggg
     3601 tgcggttggt caggcgctcg atctcgcgat gctccgcctc gggcaggcgc gcgatcgctt
     3661 ggccgtcgtg gaaggaatcg cccaggcaga ccaccgtctc gggcgccaag acgtcgatca
     3721 gggccgccag catcgccagc gtctggcggg tgtcgtggcg cggcaggagc ttgtgcgccg
     3781 atacggcata ggacgagcct ttttcgagat gcaggtcggc gaccgcgagc agccgccgcg
     3841 ccggccaatg cagtgcgcct gccggcaacg cctgcagccg ctcgccggcg cactcgaagt
     3901 cgaagggcat catggatgga tcaccacgtc ggagccggtc ggcaccagcg accacacctc
     3961 gcggatgtcg gcgtcgctga cggcgatgca cccggtcgtc cagtcgttcc gcggatagcc
     4021 aacgaataac ttgcgccagc cgttgggctg gccgtggatg tagatgtcgc cgcccggcgc
     4081 cacgccgagg ctttgcgcct gggccctgtc cttgtcgtcc ggataggaca cgcgcagcga
     4141 gagatggaac gcgcttttcg gattgcgcgc atcgatcgaa taccgaccct cgggcgtgcg
     4201 gccgtcgcct tcgcgctcct tgtggcgttc gggcgcgaag cccagcgcca cccgatagcg
     4261 cttgagcagc cggccttcac gtttcagctc catccgccgt tcgcctttga atatctcgac
     4321 aagatccgcc tgcgccgcgg ccggcgccat gtcaggcggt ttgccccgcc ggaatgctgc
     4381 cacgatcctc cgcaaactca tggtgcgcac gattgacctg atgccgcccc gtgcgcaagg
     4441 tggtgcgatg cgtcgtcttg tgtgttttgt ccttggctca gcggtgcttt ggcctttggg
     4501 cgctgccgcc caggtacagc cgcaccgcgc cgagtatgcc ctgcggctgg gagcggcggc
     4561 caacgcgccg cgcatcggga cggccgtgta cgacctcgcc caggattgcg ccggctggca
     4621 tctcaagcgc gacatcacga ccgagatcgc gctgaccacc tcgtggagga tgagcg
//
LOCUS       DASWGA010000399         3411 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2075302, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000399 DASWGA010000000
VERSION     DASWGA010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3411
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2075302"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1059)
                     /locus_tag="VF991_09580"
     CDS             complement(1..1059)
                     /locus_tag="VF991_09580"
                     /inference="COORDINATES: protein motif:HMM:NF015558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HEX9556733.1"
                     /translation="MRSSTVAVELVRLWAPDNLRRAAPGVALCAAIAAVAFVADTRNM
                     LKFGAVWVPPLILTLVIGMALQPLSDRTVLKPGLEFAGRTLLRVGVALYGARLTLGQL
                     IDGGALPVLIAFAAVAGTIVFGAWAARLFGLSRDFGLLTGCSTGVCGAAAAMAASAVL
                     PKHENSDRDLAFTVMGVNFISTVVMVIYPTLHQTLGYSLFEMGVFLGGAIHDVAQVAG
                     AGQTMGPQVLADSIITKLLRVALLLPAIAGIAWWVARGGEAAGDARPSPPVFLFGFLA
                     LAALNSLGVVPPDVKAAVAQVSSFLIITAIAALGMKTSLLALARIGIAPVMLLIAETV
                     FIGLLVVGLIYALRPLGT"
     gene            complement(1052..1273)
                     /locus_tag="VF991_09585"
     CDS             complement(1052..1273)
                     /locus_tag="VF991_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding carrier protein"
                     /protein_id="HEX9556734.1"
                     /translation="MAVVNVKSEIAGNVWKIQTKPGDRIEAEGEIMILESMKMEIPVL
                     SPKAGVIKEIKVSEGEAIGEGQLVAVLDA"
     gene            complement(1299..2084)
                     /locus_tag="VF991_09590"
     CDS             complement(1299..2084)
                     /locus_tag="VF991_09590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556735.1"
                     /translation="MTVAIIAAPSVTKLPAAADGAVVVGGSHGAVYAAYLSAKAGARA
                     AIHNDAGIGHDQAGVSGLAWAEAHGMAMAAVLSGSARIGDGEDMLRRGVISRANPLAA
                     ACGVVSGQSAAEAAERLTSAPWPHRKPAPLAEGRSLAGRIVCVDSISLADASDRGKVV
                     ASGSHGGVPAGETAAAFGPSLALFNDAGFGMEHAGVAGLAILDKAGIAGATVSTMSAR
                     IGDGRSTLLDGFISELNKAAYRLGGRIGGPALALALAVAEKAL"
     gene            2123..2734
                     /locus_tag="VF991_09595"
     CDS             2123..2734
                     /locus_tag="VF991_09595"
                     /EC_number="2.5.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF015875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016432 - tRNA-uridine
                     aminocarboxypropyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-uridine aminocarboxypropyltransferase"
                     /protein_id="HEX9556736.1"
                     /translation="MPNVPPTVDNKISVLILQHPQEQDRVLGTARLIASTLSNARIAV
                     GLSWRNLSHALNASAEPRNWGVLYLGSAPAQTLKGGPLIALDHKGEPLADQQAARAGL
                     EGLVALDGNWAQAKALWWRNAWLTRLRRFVVVPDGPSLYGDLRREARPDAVSTLEAVA
                     LALSVLEGDATMRERLLAPFRTLLSRARAAGIRDSKRDRRSRR"
     gene            2752..>3411
                     /locus_tag="VF991_09600"
     CDS             2752..>3411
                     /locus_tag="VF991_09600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014285421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase"
                     /protein_id="HEX9556737.1"
                     /translation="MLDQPTTEIPVAQRTNPERSFAEEVRALRLGDGEVFRGEGILAV
                     TKAILQSGVAYVGGYQGAPVSHLVDVLVESQDLLDELGVHLETCTNEASAAALLGASI
                     NYPLRGCVTWKSIVGTNVAADALSNLASPGVIGGALIVVGEDYGEGASIIQERAHAYA
                     LKSSLWLMDPRPNLAAIVRCTEKAFELSEATNTPVMMELRIRACHVTGEFVARDNVPP
                     AI"
BASE COUNT          578 a         1185 c         1132 g          516 t
ORIGIN      
        1 ctaggtgccg agcggcctca aggcgtagat caggccgacc accaagaggc cgatgaacac
       61 cgtctcggcg atcagcagca tcaccggggc gatgccgatg cgcgccagcg ccagcagcga
      121 ggtcttcatg ccgagcgcgg ctatggcggt gatgatcagg aacgaggaga cctgcgccac
      181 cgcggccttc acgtcgggcg gcacgacgcc cagcgagttg agcgcggcca aggccaaaaa
      241 gccgaacagg aagaccggcg gggacggccg cgcatcgccc gccgcttcgc cgcctcgtgc
      301 gacccaccag gcgatgccgg cgatggccgg cagcagtaag gccacgcgca gaagcttggt
      361 gatgatggag tcggccagga cctgcggccc catggtctgg ccggcgccgg ccacctgcgc
      421 cacgtcgtgg atggcgccgc ccaggaacac gcccatctcg aacagcgaat agcccagcgt
      481 ctggtgcagc gtcggataga tcaccatcac cacggtgctg atgaagttca cgcccatgac
      541 ggtgaaggcg agatcgcggt cggaattctc gtgcttgggc agcaccgccg aagccgccat
      601 cgctgccgcc gcgccgcaca cgccggtgga gcagccggtc agcaggccga aatcgcgtga
      661 tagaccgaac aggcgcgccg cccaggcgcc gaagacgatg gtgccggcca cggccgcgaa
      721 agcgatcagc acgggcagcg cgccgccgtc gatgagctgg cccagggtca ggcgcgcgcc
      781 atagagcgcc acgccgacgc gcagcagcgt gcggccggcg aattccagcc cgggcttcag
      841 cactgtccta tccgacagcg gctgcaacgc catgccgatg accagggtga ggatgagcgg
      901 cggcacccaa acggcgccga acttcagcat attgcgggtg tcggcgacga aggccaccgc
      961 cgcgatggcc gcgcacagcg ccacgccggg cgccgcccga cgcagattgt cgggcgccca
     1021 caggcggacc agttcgacgg cgaccgtgct gctacgcatc aagaacggcg acgagctggc
     1081 cttcgccgat cgcttcgcct tcgctgacct tgatttcctt gatgacgccc gccttgggcg
     1141 agagaacggg gatttccatc ttcatcgatt cgaggatcat gatctcgccc tcggcctcga
     1201 ttctgtcgcc gggcttggtc tggatcttcc acacattgcc ggcgatttcc gatttcacgt
     1261 tgacaacagc catgccccgg tcatctcccc gatttgtctc acagggcttt ttccgccacg
     1321 gcgagggcca gcgcaagggc cgggccgccg atgcgaccgc cgagccggta tgcggccttg
     1381 ttcagctcgg aaatgaagcc gtcgagaagc gtcgaccggc cgtcgccgat gcgggccgac
     1441 atggtcgaaa ccgtggcgcc ggcgatgccg gccttgtcga ggatggcaag ccccgccacg
     1501 cctgcatgct ccatgccgaa gcccgcgtcg ttgaacagcg ccaacgacgg accgaacgcc
     1561 gcggccgttt cgcccgccgg cacgccaccg tggctgccgc tcgcaaccac ctttccgcga
     1621 tcgctcgcgt cggccagcga gatcgaatcg acacaaacga tgcgccccgc cagggagcgg
     1681 ccttcggcga gcggtgcggg cttgcgatgg ggccagggcg ccgacgtcaa gcgctcggcg
     1741 gcctcggccg cggactggcc cgacaccacg ccgcaggcag cggcaagcgg gttggcgcgg
     1801 ctgatgacgc cgcggcgcag catgtcctcg ccgtcgccga tgcgcgcgct gccgctcagc
     1861 accgcggcca tggccatgcc atgtgcctca gcccaagcca atccgctcac gcccgcttgg
     1921 tcgtggccga tgccggcatc gttgtgtatg gcagcgcgtg cgcccgcttt ggccgagaga
     1981 taggcggcat aaaccgcgcc gtgcgagccg ccaaccacga cggcgccatc ggctgcggcc
     2041 ggcagcttgg tgacgctagg agcggcaata atggcaacgg tcatagcgac aatttccaag
     2101 tccccagtct atacgtgccc tcatgcccaa tgttccgccg acggtcgaca acaagatatc
     2161 ggtattgatc ctgcaacatc cgcaggagca ggaccgtgtg ctgggcaccg cccgcctgat
     2221 tgctagcacg ctcagcaacg cgcgcatcgc ggtagggttg tcatggcgca acctcagcca
     2281 tgcgctcaac gcttcggctg aaccacgaaa ctggggtgtg ctttatctcg gctctgcgcc
     2341 agcccagacg ctgaaaggcg ggccgctgat cgcgctcgac cacaaaggcg agccgcttgc
     2401 cgaccagcag gctgcgcgtg ccggcctgga ggggctggtg gcgctcgatg gcaactgggc
     2461 gcaggccaag gcgctgtggt ggcgcaacgc ctggctgacc aggctccggc gtttcgtcgt
     2521 ggttcccgac ggcccgtcgc tttacggcga tttgcgccgc gaggcgcggc ccgatgccgt
     2581 atcgaccctc gaggccgtgg cgctcgccct gtcggtgctg gaaggcgacg ccacgatgcg
     2641 cgagcgcctc ctggcgccgt ttcgcacgct gctttcgagg gcacgggccg ccggaatccg
     2701 cgattccaaa cgggatcgtc gctcgcgccg atagccccta tactcggctc catgctcgac
     2761 cagccgacta ccgaaatccc cgtcgctcag cgcaccaacc cggaacgctc cttcgccgag
     2821 gaggtgcggg cgctgcggct gggcgatggc gaggtcttcc gcggcgaagg catcctcgcc
     2881 gtcaccaagg ccatcctgca gtccggcgtg gcctatgtcg gcggctatca gggcgcgccg
     2941 gtttcgcacc tggtggacgt gctggtcgaa tcgcaggacc tgctcgacga gctcggcgtc
     3001 catctcgaga cctgcaccaa cgaggcctcg gcagccgccc tgctcggcgc ttcgatcaac
     3061 tatccattgc gcggctgcgt cacctggaaa tcgatcgtcg gcaccaacgt cgcggccgat
     3121 gcgctcagca acctcgcatc gcccggcgtg atcggcggcg ccctgatcgt ggtcggcgag
     3181 gattacggtg agggcgcctc gatcatccag gagcgggcgc atgcctatgc gctgaagtcg
     3241 tcgctctggc tgatggatcc gcggccgaac ctggccgcga tcgtgcgctg taccgagaag
     3301 gccttcgaac tgtcggaagc caccaacacg ccggtgatga tggagctgcg catccgtgcc
     3361 tgccacgtca ccggcgagtt cgtggccagg gacaacgtgc cgcctgcgat c
//
LOCUS       DASWGA010000400         4883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1432700, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000400 DASWGA010000000
VERSION     DASWGA010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4883
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1432700"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VF991_09605"
     CDS             <1..272
                     /locus_tag="VF991_09605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9556738.1"
                     /translation="ADVVMFIYRDEYYLMREEPKRRDNETNDHFNQRFEDWRQRCEQN
                     YGKAEIIVAKQRHGPVGIVRLSFEGQFTKFGNLPADEERPGGPTF"
     gene            283..1422
                     /gene="alr"
                     /locus_tag="VF991_09610"
     CDS             283..1422
                     /gene="alr"
                     /locus_tag="VF991_09610"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX9556739.1"
                     /translation="MSSPAADDATRRAGAILTVDLGAIAANWRGLRDAGRASGRPVDC
                     AAVLKADAYGTGAAMVGPRLAAEGCRQFFVAHIEEGIALRAVLPDHPIYVLNGLLAGT
                     EGDLVEHELTPALNHLGQLNAWRAAAQRFNRPLDAVIHIDTGLHRLGFGPEDAQALIN
                     ERGRLRGLRLALLMSHLVASEEPDNPINGEQLSRFRAFVKAMPGAPTSLANSSGIFLG
                     PDYHFDLMRPGAALYGINPLPGQPNPMLPVVTLHARILQTRRIDAFQTVGYGGAWRSA
                     RPSRVATIALGYADGYFRILINRTHVHLAGHRVPVIGRISMDLVTIDVTDVPEAEAGG
                     TVEVLGPHMTADDLADHARTNAYEVMTALGRRYARLYVDQPETPE"
     gene            1419..2198
                     /locus_tag="VF991_09615"
     CDS             1419..2198
                     /locus_tag="VF991_09615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556740.1"
                     /translation="MSLPLITLLGRMTLAFLAAVGAVAAFAIQAVRQAAQPPWYRQQI
                     IRQMLEIGYFSLPVVGLTAIFTGMVLALQSYTGFARFSAESAIPNVVVVSLTRELGPV
                     LTALMVAGRVGAAMAAEIGTMRVTEQIDALTTLSTEPFKYLVVPRLIAGVVTLPILVL
                     IADIIGVLGGFLVGVYKLDFNDAAYLRNTLDFLQFQDVFSGLVKAAVFGFLIALMGCY
                     HGYTSKGGAQGVGMATTNAVVSASMLILTFNYFITEAFFAR"
     gene            2198..2971
                     /locus_tag="VF991_09620"
     CDS             2198..2971
                     /locus_tag="VF991_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9556741.1"
                     /translation="MVAPKISLRGVTKAFGPKKVLQGIDLDVAVGESMVVIGGSGTGK
                     SVLLKCILGLLQPGGGSIKIDGEETAGINGRGRHRVMRKFGMLFQGGALFDSLRVWEN
                     VAFGPIQSDGMPAAQAREVAIAKLGAVGLGPEIGELFPSELSGGMQKRVALARAIARE
                     PEIIFFDEPTTGLDPIMADVINDLIVKCVSDLGATAVSITHDMASARKIGHRIAMLYE
                     GRLIWQGRTAEIDHSGDAHVDQFIHGRAEGPIQMQVRRL"
     gene            2974..3822
                     /locus_tag="VF991_09625"
     CDS             2974..3822
                     /locus_tag="VF991_09625"
                     /inference="COORDINATES: protein motif:HMM:NF013315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEX9556742.1"
                     /translation="MAPRPSLAEARRHFAEELRVVAHVQDERVIDAFATVPRERFVGP
                     GPWRVLNLFEGYWTTPDADPRWLCHNVLVALDESRGLNTGEPSLWALHFDRLGVQRGD
                     RVLQIGAGSGYFTAILAELAGPEGRVLAFEIDPTLAVAAEQNLQAWPNASVRHVDGIA
                     PIEGKWDVVIAFAGSTAPPLGWLDALAEGGRALIPLTGAQRSGMILRVDRHDAAFAAR
                     YVGWVGIFHCAGARNDEEAAALLRAMADPAGQRAIKWLRRDRHDADESCWLHGNGWCL
                     SKREPP"
     gene            3822..>4883
                     /gene="radA"
                     /locus_tag="VF991_09630"
     CDS             3822..>4883
                     /gene="radA"
                     /locus_tag="VF991_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012707453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEX9556743.1"
                     /translation="MARPLKRFVCQSCGAVTSKWNGRCESCGEWNTIVEEAAPAPGPA
                     GGGLARGGKGRTLDFAGLRGSTPQPPRYKSGIAEFDRVCGGGLVVGSALLIGGDPGIG
                     KSTLLLQVAAALARQHTACAYITGEEALDQVRLRADRLGLGDAPVQLTAATSVRDIVA
                     TLERSDAPKVAVIDSIQTMWLDTVDSTPGTVTQVRASAQALVELAKRRGIVVLLVGHV
                     TKDGAIAGPRVLEHMVDTVLYFEGERGHHFRILRTVKNRFGPTDEIGVFEMSDRGLSD
                     VANPSALFLAERRGHVSGACVFAGIEGTRPLLVEIQALVAPTSFATPRHAVVGWDTNR
                     LAMVLAVLEARCGVAVGAND"
BASE COUNT          711 a         1752 c         1623 g          797 t
ORIGIN      
        1 atgccgacgt cgtcatgttc atctaccgcg acgagtacta tctcatgcgc gaggagccca
       61 agcgccgcga caacgagaca aacgaccact tcaaccagcg ctttgaagac tggcgtcaac
      121 gctgcgagca aaattacggc aaggccgaga tcatcgtcgc caagcagcgc cacggccccg
      181 tcggaatcgt gcggctgtcg ttcgaaggcc aattcaccaa gttcggcaac cttccggccg
      241 acgaggagcg gccgggcggg ccgacgttct aggatccggc cgatgtcctc ccctgccgcc
      301 gacgacgcga cgcgccgcgc cggcgcgatc ctgacggtcg acctcggcgc gatcgccgcc
      361 aactggcgcg gcctgcgcga cgccggccgc gcctccggcc ggccagtcga ctgcgccgcc
      421 gtgctcaagg ccgatgccta cggcaccggc gccgcgatgg tcgggccgcg gctggcggcc
      481 gagggttgcc ggcagttctt cgtcgcccat atcgaggagg gcatcgcgct gcgcgccgtg
      541 ctgcccgacc atccgatcta tgtcctgaac ggcctgctcg ccggcaccga gggcgacctc
      601 gtcgagcatg agctcacgcc ggcgctcaac catctcggcc agctcaatgc ctggcgcgcc
      661 gccgcccagc gcttcaaccg gccgctcgat gcggtgatcc atatcgacac tggcctgcac
      721 cggctgggct tcggaccgga ggatgcgcag gccctgatca acgagcgcgg ccggctgcgc
      781 gggctgcggc tggccttgct gatgagccac ctcgtcgcct ccgaggagcc cgacaatccc
      841 atcaatggcg agcagctctc gcgctttcgc gccttcgtca aggcgatgcc gggcgcgccg
      901 acatcgctgg ccaactcctc ggggatcttc ctcggccccg actaccattt cgacctgatg
      961 cggccgggcg cggcgcttta cggcatcaat cccctgcccg gccaacccaa cccgatgctg
     1021 ccggtggtga cgttgcacgc acgcatcctg cagacccggc gaattgacgc cttccagacc
     1081 gttggatacg gtggggcatg gcggtcagcc cggccgagtc gcgtggccac gatcgcgctt
     1141 ggatatgccg acggctactt ccgcattctc atcaatcgca cccatgtgca tcttgccggg
     1201 catcgtgtgc ccgtgatcgg ccgcatctcg atggacctgg tgacgatcga cgtgacggac
     1261 gtgccggagg ccgaggccgg tggaacggtc gaggtgctgg gcccgcacat gaccgctgac
     1321 gacctcgccg accatgcgcg caccaacgcc tatgaggtca tgaccgcgct cggccggcgc
     1381 tatgcgcgtc tttatgtcga ccagccggag acgcccgagt gagcctgccc ttgatcaccc
     1441 tgctcggccg catgacgctc gccttcctcg cggccgtggg cgcggtcgcg gccttcgcca
     1501 tccaggccgt ccgccaggcc gcacaaccgc cgtggtaccg ccagcagatc atccggcaga
     1561 tgctggagat cggctacttt tcgctgcccg ttgtcggcct gaccgccatc ttcaccggca
     1621 tggtgctggc gctgcagagc tacaccggct tcgcccgctt ctcggccgag tcggccattc
     1681 ccaacgtcgt cgtggtctcg ctgacgcgcg agctcggccc ggtactgacc gccctgatgg
     1741 tggccggccg ggtcggtgcg gcgatggcgg ccgagatcgg caccatgcgg gtcaccgagc
     1801 agatcgatgc gctgaccacg ctctcgaccg agccgttcaa gtacctggtg gtgccgcgcc
     1861 tgatcgccgg cgtcgtcacc ctgccgatcc tggtgctgat cgccgacatc atcggcgtgc
     1921 tgggcggctt cctggtcggt gtctacaagc tcgacttcaa cgacgcggcc tatctgcgca
     1981 acacgctcga cttcctgcag ttccaggacg tcttctcggg cctggtgaag gccgccgtgt
     2041 tcggcttcct gatcgcgctg atgggctgct atcacggcta cacgtcgaag ggcggcgccc
     2101 agggcgtcgg catggcgacg accaacgcgg tggtctcggc gtccatgctc atcctgacct
     2161 tcaactattt catcaccgaa gccttcttcg cgcgctgatg gttgccccga agatctcgct
     2221 gaggggcgtc accaaggcgt tcgggcccaa gaaagtgctg cagggcatcg acctcgacgt
     2281 cgcggtgggc gaatcgatgg tggtgatcgg cggctcgggc accggcaagt cggtgctgct
     2341 gaaatgcatc ctcggcctgc tccagcccgg cggcggctcg atcaagatcg acggcgagga
     2401 gaccgccggc atcaacggtc gcggccgcca ccgggtgatg cgcaagttcg gcatgctgtt
     2461 ccagggcggc gcgctgttcg attcgctgcg cgtctgggag aacgtggctt tcggccccat
     2521 ccagagcgac ggcatgccgg ccgcgcaggc gcgcgaggtg gcgatcgcca agctgggcgc
     2581 ggtcgggctg ggtccggaga tcggcgagct cttcccgtcg gaactgagcg gcggcatgca
     2641 aaagcgcgtg gcgctggcgc gcgccatcgc ccgcgagccc gagatcatct tcttcgacga
     2701 gccgaccacc ggcctcgatc cgatcatggc cgacgtcatc aacgacctga tcgtcaaatg
     2761 cgtgagcgac ctcggcgcca ccgccgtgtc gatcacccac gacatggcga gcgcgcgcaa
     2821 gatcggccac cgcatcgcca tgctctatga gggccgactg atctggcagg gccgcacggc
     2881 cgagatcgac cactcgggcg acgcccatgt cgaccagttc atccacggcc gcgccgaggg
     2941 gccgatccag atgcaggtgc ggaggctctg accatggcgc cgcgccccag cctcgccgag
     3001 gcgcggcggc attttgccga ggagctgcgc gtcgtcgccc atgttcagga cgagcgcgtg
     3061 atcgacgcct tcgccaccgt gccgcgcgag cgcttcgtcg ggcccgggcc gtggcgcgtg
     3121 ctcaacctgt tcgaaggcta ttggacgacg cccgatgcgg atccgcgttg gctttgccac
     3181 aatgtgctgg tcgccctcga cgaaagccgt ggcctcaata ccggcgagcc ttccttgtgg
     3241 gcgctccatt tcgaccggct gggcgtccag cgcggcgatc gcgtcctgca gatcggcgcc
     3301 ggctccggct atttcacggc aatcctggcc gagctcgccg ggcccgaggg ccgcgttttg
     3361 gccttcgaga tcgacccgac tctggccgtt gccgccgagc aaaacctgca agcctggccc
     3421 aacgcctcgg tccgccacgt cgacggcatc gccccgatcg agggcaagtg ggacgtcgtc
     3481 atcgccttcg ccggcagcac ggcgccgccg ctcggctggc tcgacgcctt ggccgaaggc
     3541 ggccgggcgt tgatcccgct caccggcgcg caacgctcgg gcatgatcct gcgcgtcgat
     3601 cgccacgacg cggccttcgc cgcccgctat gtcggctggg tcggcatctt ccattgtgcc
     3661 ggggcgcgca acgacgaaga ggccgcggcc ctgttgcgcg ccatggccga tccggccggc
     3721 cagagagcga tcaagtggtt gcgtcgcgac cgccatgatg ccgacgagtc gtgctggctg
     3781 cacggcaacg gctggtgcct ctccaagcgc gagccgccgt gatggcccgc ccgctgaagc
     3841 gcttcgtctg ccagtcgtgc ggcgcggtca cgagcaaatg gaatggccgc tgcgagtcct
     3901 gcggcgaatg gaacaccatc gtcgaggagg ccgcaccggc gcccggcccg gccggcggcg
     3961 gcctggcgcg cggcggcaag ggccgcacgc tcgatttcgc cggcctgcgt ggctcgacgc
     4021 cgcaaccgcc gcgctacaag agcggcatcg ccgaattcga ccgcgtctgc ggcggcgggc
     4081 tggtggtggg ctcggccctg ctgatcggcg gcgatcccgg catcggcaag tcgaccctgc
     4141 tgctgcaggt cgccgcggcg ctggcgcgcc agcacaccgc ctgcgcctac atcaccggcg
     4201 aagaggcgct cgatcaggtc cggttgcgtg ccgaccgtct ggggctgggc gatgcgccgg
     4261 tgcagctcac cgccgcgacc tcggttcgcg acatcgtcgc cacgctcgaa cggtccgacg
     4321 cgcccaaggt ggcggtgatc gattccatcc agaccatgtg gctcgacacc gtcgacagca
     4381 cgccgggcac cgtcacccag gtgcgggcct cggcgcaggc gctggtcgag ctcgccaagc
     4441 gccgcggcat cgtcgtcctg ctggtcggcc acgtcaccaa ggacggcgcc atcgccggcc
     4501 cccgcgtgct cgagcacatg gtcgacacgg tgctctattt cgagggcgag cgcggccatc
     4561 actttcgcat cctgcgcacc gtcaagaacc gcttcggtcc gaccgacgag atcggcgtgt
     4621 tcgagatgtc cgaccgcggc ctcagcgacg ttgccaatcc gtccgccctc tttctcgccg
     4681 agcggcgcgg ccacgtctcg ggggcctgcg tcttcgccgg catcgagggc acgcgaccgc
     4741 tgctggtcga gatccaggct ctggtcgccc ccacctcgtt cgccacgccg cgccacgccg
     4801 tggtcggctg ggataccaat cgcctggcca tggtgctggc cgtgctcgag gcacgctgcg
     4861 gcgtcgccgt tggtgccaac gac
//
LOCUS       DASWGA010000401         3823 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1567753, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000401 DASWGA010000000
VERSION     DASWGA010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3823
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1567753"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..765)
                     /locus_tag="VF991_09635"
     CDS             complement(<1..765)
                     /locus_tag="VF991_09635"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX9556744.1"
                     /translation="MKFGASMFFTDYSMGAAELAVALEERGFDIVWAPEHSHIPLSRK
                     SAFIMGGELPKRYYDVMDPFVTLTAAALATKRLKVGTGVCLVAQRDPIQTAKLVASID
                     QVSGGRFVFGVGNGWNRDEMENHGTDFGTRHKRARENIEAMKEIWTKPKAEYHGEFVT
                     FDPVMAWPKPVQKPHPPILVGGAFPYSARRAVRYGDGWMPQMTEKSPTPLLELVPRFR
                     QMCAEAGRDPDRMDISIGGQQPDADLVKRYRDAGINR"
     gene            901..1779
                     /gene="yghU"
                     /locus_tag="VF991_09640"
     CDS             901..1779
                     /gene="yghU"
                     /locus_tag="VF991_09640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020812923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HEX9556745.1"
                     /translation="MSSTSDDYTPPAVWTWNKPSGGRFANINRPIAGPTQDKELPVGR
                     HPLQLYSLGTPNGQKVTIMLEELLALGHAGAEYDAWPIRIGEGEQFGSGFVAVNPNSK
                     IPALVDRSGPEPIRVFESGAMLLYLAEKFGALLPKAGAQHAECLSWLFWQMGSAPYLG
                     GGFGHFYAYAPTKIEYAIDRFAMETKRQLDVLDRRLGESPYLAGNEYTIADIAVWPWY
                     GGLAKGLLYGAGEFLSVQDYRNVQRWADVIGERPAVRRGRIVNRLQGDPANQLHERHD
                     ASDFELRTQDKLAAKS"
     gene            1846..2322
                     /locus_tag="VF991_09645"
     CDS             1846..2322
                     /locus_tag="VF991_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014892640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9556746.1"
                     /translation="MSKPTPPAFDPADLAESNATSYPEKFRADNSRRWNRRLGDHVGL
                     RNFGVNLTRIVPGAQSSARHAHSKQDEFIWVVSGEIVLETNEGAQTLRTGMCAGFPAG
                     CGNAHRFVNRSDADALILVVGDRTPFDEVTYPDIDNHAKAGADGRYVHTRKDGTPH"
     gene            complement(2372..2926)
                     /locus_tag="VF991_09650"
     CDS             complement(2372..2926)
                     /locus_tag="VF991_09650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556747.1"
                     /translation="MNLFSDLSLLRGLGELLIVLGLVGAVSLFFFPMDRRIQERSLGV
                     LFTLMAAGGVALAWRADKLENANRDLTPEQHVRLSKAISQFPTAKFEVLTSRGDREAH
                     SLALKIVDAVKAGSGAMPGFDDDKHSLHVGVVLVFAAKDTDLRREVADTVGRRLMEAR
                     IAVISDLAPELSEQTVRIVVGGKP"
     gene            complement(3123..>3823)
                     /locus_tag="VF991_09655"
     CDS             complement(3123..>3823)
                     /locus_tag="VF991_09655"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX9556748.1"
                     /translation="PLLGIWLLYGGLGLPIVETREWGGLMLTLFLAIYAGLIAIPLGI
                     LLALGRQSRLPMIRFASIVFIEFWRGVPIITVIFLASLLLPLIMPTGFNVDRLARAVI
                     GLAFVIAAYMAEAVRGGLQALPEGQVEAAQALGLGYWRITRLIVLPQALRIALPAMTN
                     EFIALFKNTTLVLIVSIFDLLGIAQAALADPAWVGMNMEAYVFAGAIYWFACFGLSQW
                     SRSREKRLQAAYGR"
BASE COUNT          715 a         1252 c         1259 g          597 t
ORIGIN      
        1 gcggttgatg ccggcgtcgc ggtagcgctt caccaggtca gcgtccggct gctggccgcc
       61 gatcgagatg tccatcctgt cgggatcgcg gccggcttcg gcgcacatct ggcggaaccg
      121 gggcacgagc tcgagcagcg gcgtcggact cttctcggtc atctgcggca tccagccgtc
      181 gccatagcgg accgcgcggc gcgccgaata gggaaaggcg ccgcccacca ggatcggcgg
      241 gtgcggtttc tggacgggct tgggccacgc catcacggga tcgaaggtca cgaactcgcc
      301 gtgatactcg gccttgggct tggtccagat ctccttcatc gcctcgatgt tctcccgcgc
      361 gcgcttgtgg cgggtaccga agtcggtgcc gtggttctcc atctcgtcgc ggttccagcc
      421 gttgccgacg ccgaagacga aacgcccgcc ggagacctgg tcgatcgagg cgacgagctt
      481 cgccgtctga atcggatcgc gctgggcgac caggcagacg ccggtgccga ccttcaacct
      541 cttggtcgcc agcgcggcgg cggtgagcgt cacgaacggg tccatgacgt cgtagtaccg
      601 cttgggcagc tcgccgccca tgatgaaggc cgacttgcgc gacagcggga tatgcgaatg
      661 ctcgggcgcc cagacgatgt cgaagccgcg ctcctccagc gcgaccgcga gctccgccgc
      721 gcccatcgaa tagtcggtga agaacatcga cgcaccgaat ttcatcaagc gatccccctt
      781 ggcgtctccg cgagcgcagc ctgcggcgga acgcaccgcc gcgcaactgt gggcgcgcga
      841 gattgccgca ggcaagatag gatggccttc gacgaaagcc gccagcagag gacttcgagc
      901 atgagcagca catccgacga ctacacgccg cccgcggtct ggacctggaa caagccgagc
      961 ggcggccgct tcgccaacat caaccgcccg atcgcgggtc ccacccagga caaggagctg
     1021 ccggtcggcc gtcaccccct gcagctctat tcgctgggaa cgccgaacgg ccagaaggtc
     1081 accatcatgc tcgaggagct tttagcgctt ggccacgccg gcgcggaata cgatgcatgg
     1141 ccgatccgga tcggcgaggg cgaacagttc ggcagcggct tcgtggcggt gaacccgaac
     1201 tccaagatcc cggccctggt cgatcgcagc gggcccgagc ccatccgtgt cttcgagtcc
     1261 ggcgcgatgc tgctctacct cgccgagaag tttggcgcgt tgctgccgaa agcgggcgcc
     1321 cagcacgccg aatgcctgtc ctggctgttc tggcagatgg gcagcgcgcc ctacctgggc
     1381 ggcgggttcg gccacttcta tgcctacgcg ccgaccaaga tcgaatacgc catcgaccgc
     1441 ttcgcgatgg agaccaagcg gcaactggat gttttagacc ggcggctggg cgagagcccg
     1501 tatctggccg gcaacgaata caccatcgcc gacatcgcgg tgtggccgtg gtacggcggc
     1561 ctggccaagg gattgctgta cggggcgggc gagttcctgt cggtccagga ctacaggaac
     1621 gtccagcgct gggccgacgt catcggcgaa cgtccggccg tgcgccgcgg gcgcatcgtc
     1681 aaccgccttc agggcgatcc cgcgaaccag ctgcatgaac gccatgacgc cagcgatttc
     1741 gaattgagga cgcaggacaa gctggccgcc aagagctagg gcggatcatg ggcgcatgag
     1801 cgaaggtcgg tcgtgtactg tggcctcagg cgctagagtt gcgccatgtc caagcccacg
     1861 ccccccgcct tcgatccggc cgacctcgcc gagagcaacg ccaccagcta tccggagaag
     1921 ttccgcgccg acaacagccg gcgttggaat cgccggctgg gcgatcacgt cggcttaaga
     1981 aatttcggcg tgaacctgac gcgtatcgtg ccgggcgcgc agtcctcggc gcggcatgcg
     2041 cacagcaagc aggacgagtt catctgggtg gtgtcgggcg agatcgtgct ggagaccaac
     2101 gagggcgccc agaccctgcg caccggcatg tgcgcgggct tcccggccgg ctgcggcaac
     2161 gcccaccgtt tcgtcaaccg gtcggacgcc gatgcgctga tcctggtggt cggcgaccgc
     2221 acgccgttcg atgaggtcac ctatcccgac atcgacaacc acgccaaggc cggcgccgac
     2281 ggcaggtacg tccacacccg caaggacggc acgccgcact agccattgct gaacgcctgt
     2341 agagacatgg gcgaggcgac caacgcgcag gtcagggctt tccccctacg acaatccgca
     2401 ccgtttgttc gctcaactcg ggcgcaagat cgctgatgac agcgatgcgc gcttccatga
     2461 gccgcctgcc aactgtgtcg gcgacctcgc ggcggaggtc ggtgtccttg gcggcgaaga
     2521 cgagcaccac gcccacgtgc agggaatgct tgtcgtcgtc gaaacccggc attgctccgc
     2581 ttcccgcttt tacggcatcc acgatcttca gcgccagcga atgggcttct ctatcaccgc
     2641 gcgatgtaag cacttcgaat ttggcggtcg ggaattggct tattgctttg cttagtctga
     2701 cgtgctgctc aggcgtcagg tcccgattgg cgttttccag cttgtctgcc ctccacgcga
     2761 gggcaacacc gcccgccgcc ataagggtga aaagcacgcc cagtgatcgc tcctgaatgc
     2821 ggcgatccat gggaaagaag aacagggaca ccgcgccgac caatccaagg acgatcaaca
     2881 gctcgcccaa gcccctgagc agagaaaggt cagaaaagag gttcattggc gcacccatgt
     2941 tcgcggcccg gggataacgg gccgccagag tcaaattttg acgccctgaa cggttttggt
     3001 ccggtcggga agcctaacgc gattcgcagg acaaaaccgc ccctagcgtt gatttaggct
     3061 tccctggcga gacaggtcac gtcgaaaacc agccctcggc ctcatcgtcg tcgtagccgg
     3121 tactagcgcc cgtaggccgc ctgcagccgc ttctcgcgcg agcgagacca ttgcgagagg
     3181 ccgaagcagg cgaaccaata gatcgcgccg gcgaagacgt aggcctccat gttcatgccg
     3241 acccaggcgg gatcggcaag ggcggcctgg gcgatgccca ggaggtcgaa gatcgagacg
     3301 atcagcacca gggtggtgtt cttgaacagg gcgatgaact cgttggtcat ggccggcagg
     3361 gcgatgcgca gcgcctgcgg cagcacgatc agccgcgtga tgcgccagta gcccaggccg
     3421 agcgcctggg cggcctcgac ctggccctcg ggcagcgcct gcaggccgcc gcgcaccgcc
     3481 tcggccatgt aggcggcgat gacgaaggcg agcccgatca cggcgcgcgc cagacggtcg
     3541 acgttgaaac cggtcggcat gatcagcggc agcagcagcg aggccaggaa gatcacggtg
     3601 atgatcggca cgccgcgcca gaactcgatg aacacgatcg aggcgaagcg gatcatcggc
     3661 aggcgcgatt ggcggccgag cgccagcagg atgccgagcg gaatggcgat caggccggca
     3721 tagatcgcga ggaagagcgt cagcatcagc ccgccccatt cgcgcgtctc gacgatcggc
     3781 aggccgaggc cgccataaag gagccagatg ccgagcagcg gca
//
LOCUS       DASWGA010000402         4661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1057613, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000402 DASWGA010000000
VERSION     DASWGA010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4661
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1057613"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..668
                     /locus_tag="VF991_09660"
     CDS             <1..668
                     /locus_tag="VF991_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEX9556749.1"
                     /translation="GVDTAPLESEADRLRDEGATVIFLGIDGKVAAAFAIADPIKQST
                     PEALHALAREKVRVVMLTGDNRTTAQAVARRLGIAEVEAEVLPEQKSAVVDKLRREGR
                     IVAMAGDGVNDAPALAAADVGIAMGTGTDVAIESAGVTLLKGDLTGIVRAKRLSEATM
                     RNIRQNLFFAFCYNAAGVPIAAGVLYPTFGILLSPIIAAAAMALSSVSVVANSLRLRR
                     LHL"
     gene            826..1008
                     /locus_tag="VF991_09665"
     CDS             826..1008
                     /locus_tag="VF991_09665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2933 domain-containing protein"
                     /protein_id="HEX9556750.1"
                     /translation="MLIRTPLGWALALAIAAIGAYLLVTHTGHVLMVLPYLLLMACPL
                     MHVFMHGGHGHDHAKK"
     gene            983..1414
                     /locus_tag="VF991_09670"
     CDS             983..1414
                     /locus_tag="VF991_09670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556751.1"
                     /translation="MATITRRSDPRALRNAVPDVAIAAVVVVGLDYQPFGLGQRTVRV
                     AWRLGAAYEGPMIIKLLPALGLCLLLSAEAQAQSDDGAYCAQLSALYRRYLGNTGEGR
                     QFPDVTASVAMDECQKGNTVAGIPVLEKKLRDARFTLSKRG"
     gene            complement(1577..2422)
                     /locus_tag="VF991_09675"
     CDS             complement(1577..2422)
                     /locus_tag="VF991_09675"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9556752.1"
                     /translation="MSEPEESSKDWRALNRANWDERVALHLKPTAYDLKALRAGRGEL
                     NPVEEAEIGQVKGLKVLHLQCHFGADTLCLAQRGAFVVGLDFSSAAIAAARDLAVELG
                     LAQRARFVHSDLYDAPSSIAEPASFDLVYTSWGATCWLPDIRRWAGIVAHFLKPGGRL
                     YYADAHPAAYVFDDLAKLPDGKPGYFAPYFERKPLVMVDHKDYADPTAHLVNATNVNW
                     LHPLSDILGGLIDAGLSLDWLHEHAQVPWRMFEILVKKDDGDWHWPDRQWLPLAVSLQ
                     ATRRR"
     gene            complement(2419..3336)
                     /locus_tag="VF991_09680"
     CDS             complement(2419..3336)
                     /locus_tag="VF991_09680"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEX9556753.1"
                     /translation="MLLMTTSDLPLKRIARGKVRDVYEVDADRLLLVTTDRVSAYDVV
                     MAEPIPMKGAVLTQTSAWWFRQLGDTVRHHMIAADAGEIIAAVPALKDHRDQLAGRAM
                     LCRRATVFPIECVIRGYLSGSAWREYVKAGTLAGEKLPSGLQESSRLDPPIFSPATKA
                     ESGHDENITVGRMREVLGGEVTAELERLTRLVYTKGRDVALKQGIIIADTKFEFGRAK
                     SGEILLIDEVMTPDSSRFWPADGYQPGRPQPSFDKQPLRDWLDVERHAGRWNGDAPAS
                     KLPADVVDATSKRYREAYRRLTGSELVVP"
     gene            complement(3478..3870)
                     /locus_tag="VF991_09685"
     CDS             complement(3478..3870)
                     /locus_tag="VF991_09685"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX9556754.1"
                     /translation="MAESENYKKGTEVRSKLMGAKFADQMNKSVYDDPMMKKFGDYAR
                     EAVFGMLWSRPGLDMKTRALICVVSDTAQARWPELAIHLRMARNQGWTEDELSEALMH
                     LCGYIGLPSVREALLTAKEVFEEMRHEK"
     gene            4269..>4661
                     /locus_tag="VF991_09690"
     CDS             4269..>4661
                     /locus_tag="VF991_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556755.1"
                     /translation="MRTRLEELAEAEPPSTAASDDAASMEMVERVMAIAHLPATAHVA
                     VIGRHTLPFVLALMRSGCDCVRSLRPGAPSPDCEAADLAWIVDIGDERELDEALRAAR
                     SRAGASGRVILEGAACRWRNALAAIREHA"
BASE COUNT          780 a         1575 c         1510 g          796 t
ORIGIN      
        1 tcggtgtcga cacggcgccg ctcgagagcg aggcagaccg cctgcgcgac gaaggcgcga
       61 ccgtcatctt cctcggcata gacggcaagg tcgccgccgc gttcgccatc gccgatccga
      121 tcaagcagag cacgcccgag gcgctgcacg ccctggcgcg ggagaaggtg cgggtcgtca
      181 tgctgaccgg cgacaatcgc acgaccgccc aggccgtcgc ccgccgcctt ggcatcgccg
      241 aagtggaggc cgaggtgctt cccgagcaga agagcgcggt cgtcgacaag ctgcggcgcg
      301 aggggcggat cgtcgccatg gccggcgatg gcgtcaacga tgcgccggcg ctggccgccg
      361 ccgacgtcgg catcgccatg ggcaccggca ccgacgttgc gattgaaagc gcgggcgtca
      421 ccttgctgaa aggcgacctg acgggaatcg tgcgcgccaa gcgcctgtcc gaggcgacga
      481 tgcgcaacat ccgccagaac ctgttcttcg cgttctgcta caacgccgcc ggcgtgccga
      541 tcgccgccgg cgtcctctat ccgaccttcg gtatcctgct gtcgcccatc atcgctgcgg
      601 cggcgatggc gctgtcctcg gtcagcgtcg tcgccaactc cctgcggttg cggcggctgc
      661 acctctagaa gacgcatccg gcatttgcgc tatatcaacg cgggtctccg ccgatccggc
      721 agcatgtccg gccggcagca tgtccggaac gcaaggactg acccgccacg acaggagcgt
      781 ctgatggaaa ccgagccgca gagcctgcgc caaaactggc gcaagatgct gatcaggacg
      841 cctttgggct gggctctcgc cttggcgatc gcagccatcg gggcctattt gctcgtcacc
      901 catacgggcc acgtcctgat ggtgctccct tacctgctgc tgatggcctg tcctctgatg
      961 catgtcttca tgcatggcgg ccatggccac gatcacgcga agaagtgacc cgagagcgct
     1021 gcggaacgct gtcccagatg tcgcgatagc cgcggttgtt gttgttggcc ttgattatca
     1081 gccgttcggc ctcgggcagc gcaccgtccg ggttgcatgg cggctcggtg ccgcctacga
     1141 gggacccatg atcatcaagc tgctgcccgc cctcggtctc tgtttgctgc tgtcggctga
     1201 ggcgcaggcg caaagcgacg acggcgccta ctgcgcccag ctttccgccc tctaccgccg
     1261 ctatctcggc aacaccggcg aaggccgcca gttccccgac gtgacggcct cggtggcgat
     1321 ggacgaatgc cagaagggca acacggtcgc cggcatcccg gttctcgaga aaaaactgcg
     1381 cgacgcgcgg ttcacgctgt cgaagcgcgg ttagagcgcg ttccaattaa ttgtgtctca
     1441 cgagctggag ctaggaaaac gctgtcatcc cgagcgaagc gagggaccct tgattggcac
     1501 cgcgaaaggt ccctcgctac gctcgggatg acaccgaacg taaacaacga acgcatccac
     1561 gctatcgaaa ttcgcgctag cggcgccgcg ttgcctgcag cgacacggca agcggcaacc
     1621 attggcggtc gggccagtgc cagtcgccgt catccttctt caccagaatc tcgaacatgc
     1681 gccacggcac ctgggcgtgc tcgtgcagcc agtcgagcga caggccggcg tcgatcaggc
     1741 cgcccaggat gtcggacagc ggatgcagcc agttcacatt ggtggcattg acgagatggg
     1801 ccgtcgggtc ggcgtagtcc ttgtgatcga ccatgaccag cggcttgcgc tcgaagtagg
     1861 gcgcgaagta gcccggcttg ccgtccggaa gtttcgccag atcgtcgaag acataggccg
     1921 ccggatgcgc atcggcgtag taaagccggc cgccgggttt caggaagtgg gccacgatcc
     1981 ccgcccagcg cctgatgtcc ggcaaccagc aggtggcgcc ccagctcgta tagaccaggt
     2041 cgaacgaggc aggctcggcg atggatgaag gcgcgtcgta gagatcggag tgcacgaagc
     2101 gcgcgcgctg ggcgaggccg agctcgacgg cgaggtcgcg cgcggcggcg atcgcggctg
     2161 aggaaaaatc gagaccgacc acaaaggcgc cgcgctgggc caggcaaagc gtgtcggcgc
     2221 cgaagtggca ctgcaagtgc agcaccttca ggcccttgac ctggccgatc tcggcctcct
     2281 cgaccgggtt gagctcgccg cgaccggcgc gcaatgcttt cagatcatag gccgtcggct
     2341 tgagatggag ggcgacgcgc tcgtcccagt tggcgcgatt gagcgcgcgc caatccttgg
     2401 aagactcctc cggctcgctc atggcacgac gagctcgctg ccggtcagcc ggcgataggc
     2461 ctcgcggtag cgcttgctgg tggcgtcgac cacgtcagcc ggcagcttgg acgcaggcgc
     2521 atcgccgttc cagcggccgg catggcgctc gacatcgagc cagtcgcgca gcggctgctt
     2581 gtcgaagctg ggttgcggcc ggccgggctg ataaccgtcg gccggccaga agcgcgaact
     2641 gtcgggagtc atcacctcgt cgatcagcag gatctcgccc gacttggcgc ggccaaactc
     2701 gaacttggtg tcggcgatga tgatgccctg cttcaaggcg acgtcacggc ccttcgtata
     2761 gacgaggcgc gtcaaccgct cgagctcggc cgtcacctcg ccgcccagca cctcgcgcat
     2821 gcggccgacg gtgatgttct cgtcgtggcc gctttcggcc ttggtggcag gactgaagat
     2881 cggcggatcg agccggctgc tctcctgcaa tcccgacggc agcttctcgc cggcgagcgt
     2941 gccggccttg acatattccc gccacgccga accggagaga tagccgcgaa tcacgcactc
     3001 gatgggaaac acggtggcgc gccggcacag catggcgcgg ccggcgagct ggtcgcgatg
     3061 gtccttgagc gccgggacgg cggcgatgat ctcgccggcg tccgccgcga tcatgtgatg
     3121 cctgaccgtg tcgcccagct ggcggaacca ccaggcactg gtttgcgtca gcaccgcgcc
     3181 cttcatcggg atcggctcgg ccattaccac gtcgtaggcg ctgacgcggt ccgtcgtcac
     3241 cagcaagagg cggtcggcat cgacctcgta gacgtcgcgc accttgccgc gggcgatccg
     3301 cttcaacggc agatcgctcg tcgtcatcaa cagcataaaa tcccccaact tccgtcggtc
     3361 ccaaccgtag cgcgaagcgc ggagcggagg gaccttctct ttacaacaag ccgcttattg
     3421 tcgagagaag atccctcggc tgcgccgccc ttcgggcggc ttcgctcggg acgacggcta
     3481 cttctcgtgc cgcatctctt cgaacacttc cttggcggtc agcagcgcct cgcgcaccga
     3541 gggcaggccg atatagccgc agagatgcat caaggcctcg gacaattcgt cctcggtcca
     3601 gccctggttg cgcgccatgc gcagatggat cgccagttcc ggccagcgtg cctgggcggt
     3661 gtcggagacg acgcagatca gcgcccgcgt cttcatgtcg aggccggggc gcgaccacag
     3721 catgccgaac accgcctcac gggcgtagtc gccgaatttt ttcatcatcg ggtcgtcgta
     3781 gacggacttg ttcatctggt cggcgaactt ggcgcccatc agcttgctgc ggacctcggt
     3841 gcccttcttg taattctcgc tctcggccat cgttccctcc ttggaagggc gcagcctagc
     3901 aggttttttg ccgcagccgt ttccctatgc cgcccctata gctgcgggcg ggcatccgtc
     3961 tcgaattcct atggcctcaa tcgctatctc aagcacgtac acagaatgcc gatcatgccc
     4021 tttgtcgcga tcctaccgaa ggccgcggcg ctcgccgccc tcctggtttg tagtgcggac
     4081 accctgaaac gagaccgggc ttccgcaccg cggcctgatc ctgcagcggc gatcccggtc
     4141 tccggagagg ccgccaccag ggccctcgcg accaaggcca ttcccctcca ttgccggcgg
     4201 accttcggct gcgcgccgct ggcgaccatg gcagccggac aagttcaacc atgaccagga
     4261 gtacgatcat gcgtacgcgt ctcgaggagt tggctgaagc cgaaccgccg tctaccgccg
     4321 cgtccgatga cgccgcgagc atggaaatgg tcgagcgcgt gatggcgatc gcccacctgc
     4381 cggcaacggc gcatgtcgcc gtcatcggac gtcacaccct gcccttcgtt cttgcgctga
     4441 tgcggtccgg ctgcgactgc gtgcgcagcc tgcgtcccgg cgcgccgtcg cccgactgcg
     4501 aggcggccga cctcgcctgg atcgtcgaca tcggcgacga gcgcgaactg gatgaagccc
     4561 tgcgagcggc acgctcgcgc gccggtgcga gcgggcgcgt catcctggaa ggcgcggcct
     4621 gccgctggcg caatgcgctt gccgcaatcc gcgagcatgc c
//
LOCUS       DASWGA010000403         1570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1433136, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000403 DASWGA010000000
VERSION     DASWGA010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1433136"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..671
                     /locus_tag="VF991_09695"
     CDS             <1..671
                     /locus_tag="VF991_09695"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF039902.3"
                     /note="charges one glutamine molecule and pairs it to its
                     corresponding RNA trinucleotide during protein
                     translation; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEX9556756.1"
                     /translation="DAAVPAFAHLPLLVDAAGGGLSKRAGSLSIGELRDRGIEALAVS
                     ALLARLGTADPVEPVTSLEALVATVDFGRVGRAAARFSEEELSHLSARTLHLLLYAAV
                     RDRLPENVGEALWLAVRGNLSTLADAADWAEIVGGALTPTLEDPAFLEQAAARLPAEP
                     WTEATWKEWTSAVSAATQRKGRALFHPLRLALTSRETGPEMAKLLPLIGRAKAAARLN
                     GQTA"
     gene            complement(652..1218)
                     /locus_tag="VF991_09700"
     CDS             complement(652..1218)
                     /locus_tag="VF991_09700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016393899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM165/GDT1 family protein"
                     /protein_id="HEX9556757.1"
                     /translation="MEAFFVSAAVVAIAEIGDKTQLLALMLAARYRKPIPIILGIFCA
                     TLANHALAAWVGAEVAAWIGADAMRWVLAVTFIAMAGWCLIPDKADDGPQAARQAGAF
                     LATLVAFFLVEIGDKTQIATVALAARFNSLIAVTAGTTVGMLLANVPVVLFGDAIAKR
                     LPLKWVRAAAAILFLLLGLAAIFMPSAH"
     gene            1372..>1570
                     /locus_tag="VF991_09705"
     CDS             1372..>1570
                     /locus_tag="VF991_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX9556758.1"
                     /translation="MSLIIYNTLSREKEPFVPLDAGHVRLYICGPTVYDYVHIGNARP
                     VVAFDVLYRLLKRRYRRVTYVR"
BASE COUNT          250 a          521 c          549 g          250 t
ORIGIN      
        1 tcgatgccgc ggtgccggcc ttcgcccact tgccgctgct ggtcgatgcg gccggcggcg
       61 gcttgagcaa gcgcgccggc tccttgtcga tcggcgaatt gcgcgaccgc gggatcgagg
      121 cgctggcggt ctccgccctg ctggcgcgcc tcggcacggc cgatccggtc gagccggtga
      181 cgtcgctcga ggcgctcgtg gccacggtcg acttcggccg cgtcggccgc gccgccgcac
      241 ggttttccga agaagagctt tcgcatctca gcgcccgcac gctgcacctc ttgctctacg
      301 cggcggtgcg cgatcgcctg cctgaaaatg tcggcgaggc cctgtggctt gcggtgcgcg
      361 gcaatctctc gaccttggcc gatgccgctg attgggccga gatcgtcggg ggtgcgctca
      421 cgcccacgct cgaggatcct gccttcctgg agcaggcggc ggcgcgactg ccggccgagc
      481 cgtggaccga ggcgacctgg aaggaatgga cttcggcggt ctcggccgcg acgcaacgca
      541 agggccgcgc gctgttccat ccgctgcggc tggcgctgac ctcgcgcgag accggaccgg
      601 agatggcgaa gctgctgccg ctgatcggcc gggcgaaggc cgcggcgcgt ctcaatgggc
      661 agacggcatg aagatcgccg cgagtccgag cagcaggaac aggatcgccg ccgcggcgcg
      721 cacccacttg agcggcaggc gcttggcaat ggcatcgccg aacagcacca ccggcacgtt
      781 ggccagcagc atgccgacgg tagtgcccgc ggtgacggcg attagcgaat tgaagcgcgc
      841 cgcgagggcg accgtcgcga tctgagtctt gtcgccgatc tcgaccagga agaaggcgac
      901 cagagtggcg aggaaggcgc cggcctgacg cgccgcctgt ggcccgtcgt cggccttgtc
      961 gggaatcagg caccagccgg ccatggcgat gaaggtgacg gccagcaccc agcgcatcgc
     1021 gtcggcgccg atccaggcgg cgacctcggc gcccacccag gcggccagcg cgtggttggc
     1081 cagggtggcg cagaagatgc cgaggatgat cgggatcggc ttgcggtagc gcgccgccag
     1141 catcagggcg aggagctggg tcttgtcgcc gatctcggcg atggcgacga cggcggctga
     1201 gacgaaaaac gcttccattg gcccgcattt gcacagaaag aacgcatcgg ataaactacc
     1261 gaaatgtcgc tccttctatt ccccggcgcg ccctctgcgc gatgtaactg aagttgccgc
     1321 ccatgtgcgg gcggctggac ttcgtacaat gctgatcggg gagtagggac catgtccctc
     1381 atcatctaca acacgctgtc gcgcgaaaaa gagccattcg taccgctcga tgcagggcac
     1441 gtgcgcctgt atatctgcgg cccgaccgtc tacgactacg tccatatcgg caatgcgcgg
     1501 cctgtggtgg cgttcgacgt gctctaccgc ctgctcaagc ggcgctatcg gcgcgtcacc
     1561 tacgtgcgca
//
LOCUS       DASWGA010000404         2632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_677784, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000404 DASWGA010000000
VERSION     DASWGA010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_677784"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /gene="ccmI"
                     /locus_tag="VF991_09710"
     CDS             complement(<1..233)
                     /gene="ccmI"
                     /locus_tag="VF991_09710"
                     /inference="COORDINATES: protein motif:HMM:TIGR03142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HEX9556759.1"
                     /translation="MLEFLLALLTTATVGVLLIPLLRARSTPSNRFDGELLIYRDQLA
                     EIERERAAGTLPESEAAAARIEVERRILAAGDQP"
     gene            complement(233..757)
                     /locus_tag="VF991_09715"
     CDS             complement(233..757)
                     /locus_tag="VF991_09715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018329593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HEX9556760.1"
                     /translation="MKRALALLLLVLIALPALAVEPSEMLPDPALEARAREVGQSLRC
                     VVCQNQSIDDSAAEVAHDMRRAVRERLSAGDSNDQVFAYMVARYGDYVLLKPPFKAGT
                     LVLWLGAPALMLIAAGALLLAARRRRVPLAPSPLSADERRRLRVILSEAKDLMPVATG
                     DEVLRSAQDDKRQP"
     gene            complement(754..1293)
                     /locus_tag="VF991_09720"
     CDS             complement(754..1293)
                     /locus_tag="VF991_09720"
                     /inference="COORDINATES: protein motif:HMM:TIGR00385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HEX9556761.1"
                     /translation="MSRRLLFLLPLLTLALMAGFFAWSLMAGRDPASIGSVMVGRPAP
                     HLDLPALSPGDPPITDALLKSGKPVLVNFFASWCAPCLAEHPLFTRLKDRDGAVLIGI
                     AWKNKREDALAWLKRLGDPFKSAGLDLLGKTGLDWGLSGVPETYAIDGNGIVRLHFRG
                     PLTERDLNDSIIPFLKGAK"
     gene            complement(1370..>2632)
                     /locus_tag="VF991_09725"
     CDS             complement(1370..>2632)
                     /locus_tag="VF991_09725"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HEX9556762.1"
                     /translation="FWFWDPVENASLMPWLAGTALLHSAIVVEKRDALKSWTVLLAIL
                     AFSLSLLGTFLVRSGVLTSVHAFAQDPARGMYILGFLLAVTGGGLTLYAWRAPRLESG
                     GLYQPLSREGALILNNLLLCTLAATVLLGTLYPLFLDLLTGNKVSVGPPFFNATFVPI
                     CAPLFAALCVGPFLGWKRAELWPALRQLRVAFIVALIAAIVASYAIDGRATLAALAFG
                     FGIWLILGSLFEFAGRLRLGRAPWAETMRRLSATPRASVGMTIAHAALGVVVLGAVAT
                     GAWHLELIRTLKPGETVAFAGYDVTLQRIDNVQGPNYIAERATLAVAYGGKPYTTLQP
                     ERRLFLVQRRQVAETAIHTNLLRDFYATLGEGDAKSGWTIRLYLNPLAPWIWLGAALC
                     ALGGFVSLSDRRLRIGAPSRRATVQAAE"
BASE COUNT          457 a          834 c         1000 g          341 t
ORIGIN      
        1 ggctgatcgc cggccgcgag aatgcggcgc tcgacctcga tgcgcgccgc ggcggcctcg
       61 ctctcgggca aggtgccggc ggcgcgctcg cgctcgatct cggcgagctg gtcgcgatag
      121 atcaaaagct cgccgtcgaa gcggttgctc ggtgtggagc gcgcgcgcaa cagcgggatc
      181 agcaggacgc cgacggtcgc cgtggtgagg agcgcgagga ggaattcgag cactacggct
      241 gcctcttgtc gtcctgagcg gagcgaagga cctcatcgcc ggttgccacg ggcatgagat
      301 ccttcgcttc gctcaggatg acacgaaggc gccgccgctc gtccgcgctg agcggcgatg
      361 gcgcgagcgg gacgcggcga cggcgggcgg ccaacagcag ggcgccggct gcgatcagca
      421 ttagcgccgg cgcgcccagc cacagcacca gcgtgccggc cttgaagggc ggtttcagca
      481 gcacgtagtc gccgtagcgg gcgaccatgt aggcgaagac ctggtcgttg ctgtcgccgg
      541 ctgaaaggcg ctcgcgcacg gcgcggcgca tgtcgtgcgc cacctcggcc gccgaatcgt
      601 cgatcgactg gttctggcag acgacgcagc gcaaggactg gccgacctcg cgcgcccgcg
      661 cctcgagcgc cggatcgggc agcatctcgg agggctcgac ggcgagcgcc ggcaaggcga
      721 tgagcacaag caacagaagg gcgagcgcgc gcttcacttc gcccccttca aaaaaggaat
      781 gatgctgtcg ttcaaatccc gctcggtcag cggcccgcgg aagtgcaggc ggacgatgcc
      841 gttgccgtcg atggcgtagg tctcgggcac gcctgaaagg ccccagtcga ggccggtctt
      901 gcccaaaagg tcgaggccgg ctgacttgaa gggatcgccc agccgcttca gccaggcgag
      961 cgcgtcctcg cgcttgttct tccaggcgat gccgatgagg acggcaccgt cgcggtcttt
     1021 cagccgggtg aacagcggat gctcggcgag gcagggcgcg caccagctgg cgaagaaatt
     1081 tacaagcacc ggcttgcccg acttcagcag cgcgtcggtg atcggcggat cgccggggct
     1141 gagcgccggc aggtcgaggt gcggcgcggg acggccgacc atcaccgagc cgatcgacgc
     1201 gggatcgcgg ccggccatca gcgaccaggc gaagaagccc gccatcaggg cgagcgtcag
     1261 cagcggcagg aggaagagga gacggcggct catggtcttc cggaccgcga gcgtctcgct
     1321 cgctcatgag catgagcgag cgggacgctc gcggtccgga agagcatgat cattcggccg
     1381 cctgcaccgt tgcccggcgc gacggcgcac cgatcctgag tcggcggtcg gacagcgaga
     1441 cgaagccgcc cagggcgcac agcgcggcgc cgagccagat ccacggcgcc aggggattga
     1501 ggtagaggcg gatggtccag cctgacttgg cgtcgccctc gcccagggtg gcgtagaagt
     1561 cgcgcagcag gttggtgtgg atcgcggtct cggcgacctg gcggcgctgc accaggaaca
     1621 gccggcgctc gggctgcagc gtcgtgtagg gcttgccgcc gtaggctacc gccagcgtgg
     1681 cgcgctcggc gatgtagttc gggccctgca cgttgtcgat cctttgcaag gtgacgtcgt
     1741 agccggcgaa ggccaccgtc tcgccgggtt tcagcgtgcg gatcagctcg aggtgccagg
     1801 cgccggtcgc gaccgcgccc agcacgacga cgccaagggc tgcatgcgcg atggtcatgc
     1861 cgacgctggc gcgcggcgtg gcgctgagcc gccgcatcgt ctcggcccac ggcgcgcggc
     1921 ccagcctcag gcggccggcg aactcgaaaa ggctgcccag gatcagccag atgccgaagc
     1981 cgaaggcgag cgcggccagg gtggcgcggc cgtcgatcgc ataggacgcg acgatggcgg
     2041 cgatcagcgc gacgatgaag gcgacgcgga gctgccggag cgccggccac agctcggcgc
     2101 gcttccagcc caggaacggg ccgacgcaga gcgcggcgaa gaggggcgcg cagatcggca
     2161 cgaaggtggc gttgaagaag ggcgggccga ccgagacctt gttgccggtt aaaaggtcga
     2221 ggaacagcgg gtagagcgtg cccagaagca cggtggcggc cagggtgcag agcagcaggt
     2281 tgttcaggat cagcgcgcct tcgcggctca gcggctgata gaggccgccg gattcgagcc
     2341 tcggcgcgcg ccaggcgtag agggtgaggc cgccgccggt gacggcgagc aggaagccca
     2401 ggatgtacat gccgcgcgcc ggatcctggg cgaaggcgtg caccgaggtg agcacgcccg
     2461 agcggaccag gaaggtgccg agcaggctga gcgagaaggc gaggatggct agaaggaccg
     2521 tccagctctt cagcgcatcg cgcttttcga cgacgatggc ggagtgcaag agcgcggtgc
     2581 cggcgagcca cggcatcagc gaggcgttct cgacgggatc ccagaaccag aa
//
LOCUS       DASWGA010000405         5479 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1058120, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000405 DASWGA010000000
VERSION     DASWGA010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5479
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1058120"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1063
                     /locus_tag="VF991_09730"
     CDS             <1..1063
                     /locus_tag="VF991_09730"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX9556763.1"
                     /translation="RGGGFRRQGGLVEVETDAGVRGIGEAFGNPLVTREYFRMIEPLF
                     VGKSVFDFDHVEARVRNAMYHMGVGNQLTACLAGVNVALYDAIARGFGVRVCDLIGGC
                     ATRRIPAYASTGFFSNDPDRQLDHMLAEAAGHPYAGAKIKIGRGIRDDVARVRRAREV
                     LGPDKLLMVDINGAYTADVALECARVLSPFAIHWIEEPLPPGDLLGYAELRSRSPIPI
                     AAGEAHHTMRDFRALIDGRCVDIVQPSIPATGGLGEAKRIATLAYAQNLRVAPHVWGG
                     AVGLATACHFIASLPATPHTDHPPYPLMLEYDMSDNALRTQLLKTPLKLEAGHVLLPE
                     GPGLGIELDQDAVERYRVC"
     gene            1130..2386
                     /locus_tag="VF991_09735"
     CDS             1130..2386
                     /locus_tag="VF991_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556764.1"
                     /translation="MFRTTRRTIVAGATLAALGLATGATAQDAVKIGVIYPLSGNSAS
                     AGNYSKMAIEVGADVINNGNAELAKIMPLAKGGGLPGLKGAKIQLIFADNQGTPAAGQ
                     NQALRLISEEKVAALIGAYQSGITVTASAIAERHGVPFLTAESVASNLTERGFKWFFR
                     TTPVAIDFARAYSTFLREQKAAGQKVGSIAVVHENTEYGNSVASVIVDQFAKDGLSVT
                     QKIAYSANSSDVQPQVLQLKEKNPDVVIFISYTSDAILYTKMMKELGWKPAIMIADNA
                     GFNDPAFVKSMSSLVEGLVNRSTFAGGKPGSVPALFNELYKKKTGGDDLDDVSARGLQ
                     GFLVMADAINRAGSTDPAKIRDALKATDLKADQMVTGYDGVKFDDKGQNVLASSLVTQ
                     MRGGKYVAIWPKARATDQVVLPYKGW"
     gene            2421..3284
                     /locus_tag="VF991_09740"
     CDS             2421..3284
                     /locus_tag="VF991_09740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556765.1"
                     /translation="MSLTLVQVIVSGLLLGAVYALFSSGLTLIWGMMNVVNFAHGDFV
                     MLGMYAAVMVWTALGGGPFAAVPAAAMLIATLGMLSYFLLVRHIMRGPMLAQILGTFG
                     LALFLRYAAFWTFGSDFKTLPDTMVGGSFVLLGIRFEGSRVLAGVVGLAITLVLHLIL
                     TRTAIGSRMLAVSEDATAAQLMGIRPQRMQALAWGMAGAATGIAGALIANFFYTSPTV
                     GETLAILAFVVVSFGGFGSVLGALVAGLIIGVVESLSAYLVGPVYKDVIVYVLFVLVL
                     WFRPQGLMGKA"
     gene            3281..4276
                     /locus_tag="VF991_09745"
     CDS             3281..4276
                     /locus_tag="VF991_09745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556766.1"
                     /translation="MRRFLIPGALVVLALVYPLLTSGFPVYERLGALVLLAAIGASAW
                     NIVGGYAGQVSVGHSVFFGFGAYSSVVVYTHLGWPPIAGAPLGMLLSVAVAAVIGVPT
                     LRLSGHYFSMATIAVAELVRVLSSTSEFLGGAQGLGGPAMPRTVFDLSFISAMPFYYI
                     FLAVLAFLLGLTWWMERSRIGFYLRAIKDSERAARSLGVSAGRYKLYAYMLSGAFTAL
                     AGSLYLCMFGFVDPESAFGILISVKMVVMAALGGAGQLFGPLVGALILVPLEELSNSY
                     LGGRGAGLTFVVYGAIIVIIARFLPSGLLSLFERRPTRPAKSEPAKPEPASGHAD"
     gene            4266..5000
                     /locus_tag="VF991_09750"
     CDS             4266..5000
                     /locus_tag="VF991_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556767.1"
                     /translation="MLIEAKNVTKAFGAFKAVDDASVSVEEGDILGLIGPNGAGKSTF
                     FNCLTGDLPLTSGTVRFAGAEVTRLPPEARAALGLARTFQVPLTFESMSVLDNATIGA
                     LLRHANAREARAKARDVLQRVGLGPLADSPAKSLGTPGRKRLEIARALASEPQALLLD
                     EAMAGLTPTEVREAIELVRRIHGGGITIVIVEHIMEVIVSLAQKVVVFHQGREIARGT
                     PREVTSDQAVIEAYLGRRKVRHGTDP"
     gene            4997..>5479
                     /locus_tag="VF991_09755"
     CDS             4997..>5479
                     /locus_tag="VF991_09755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9556768.1"
                     /translation="MSAPLLRVSHLEVRYGDLIGVADVSLEVPAGSVVALLGSNGAGK
                     TTTLNAIAGIAVVSKGTVEFGGENIAGQPAYAIVRKGLALSPEGWRLFTQQSVENNLM
                     LGATALADRARVPRLLERVYAVFPRLAERRRQRAGTMSGGERQMLAVGRALMSEPELL
                     L"
BASE COUNT          798 a         1909 c         1823 g          949 t
ORIGIN      
        1 gcgcggcggc ggctttcgcc gccagggcgg gctggtcgag gtcgagaccg atgccggcgt
       61 gcgcggcatc ggcgaggcct tcggcaaccc gctggtgacc cgcgaatatt tccgcatgat
      121 cgagccgctg ttcgtcggca aaagcgtgtt cgacttcgac catgtcgagg cccgcgtgcg
      181 caacgcgatg taccatatgg gcgtcggcaa ccagctcacc gcctgcctgg ccggcgtcaa
      241 cgtcgccctc tacgacgcca tcgcccgcgg cttcggcgtg cgggtctgcg acctgatcgg
      301 cggctgcgcc acgaggcgca tcccggccta tgcctcgacc ggcttcttct ccaacgatcc
      361 cgaccgccag ctcgaccaca tgctggccga ggcggcgggc catccctatg ccggcgccaa
      421 gatcaagatt ggccgcggca tccgggacga cgtggcgcgc gtgcgtcgcg cgcgcgaggt
      481 gctggggccg gacaagctcc tgatggtcga catcaacggc gcctacaccg ccgacgtggc
      541 gctggaatgc gcgcgggttc tctcgccgtt cgccatccat tggatcgagg agccgctgcc
      601 gcccggcgac cttttgggct atgccgagct gcgcagccgc tcgccgatcc cgatcgctgc
      661 cggcgaggcg catcacacca tgcgcgattt ccgtgccctg atcgatggcc gctgcgtcga
      721 catcgtacag ccgtcgatcc cggccaccgg cggtctcggc gaagccaagc gcatcgccac
      781 cctggcatat gcccagaacc ttcgcgtcgc gccgcacgtg tggggtggcg cggtgggcct
      841 ggcgaccgcc tgtcacttca tcgcctcgct gccggccacg ccgcacaccg accatccgcc
      901 ctatccgctg atgctcgaat acgacatgag cgacaacgcc ctgcggacgc agctgctgaa
      961 gacgccactc aagctcgagg ccggccatgt gctgctgccc gaggggccgg gcctgggcat
     1021 cgaactcgat caggatgccg tcgaacgcta tcgggtttgc tgaccagggc gcggcgtgcc
     1081 aatcttttga ggcatcaaga aaatccacga tattcaggga gaaacacgca tgttcaggac
     1141 cactcgtcgg acgatcgtcg cgggcgcgac cctggccgcc cttgggctgg cgacaggcgc
     1201 gactgcccag gatgccgtca agatcggcgt catctatccg ctgagcggca attcggcgag
     1261 cgccggcaac tactccaaga tggccatcga ggtcggcgcc gacgtcatca acaacggcaa
     1321 cgccgagctc gccaagatca tgccgctggc caagggcggc ggtctgccgg gtctgaaggg
     1381 cgccaagatc cagctcatct tcgccgacaa ccagggcacg cctgcggccg gccagaatca
     1441 ggcgctgcgg ctgatctccg aggagaaggt ggcggcgctg atcggcgcct accagtcggg
     1501 catcaccgtc accgccagcg ccatcgccga gcgccacggc gtgccgttcc tgaccgccga
     1561 gtcggtggcc tccaacctta ccgagcgcgg cttcaagtgg ttcttccgca ccacgccggt
     1621 cgccatcgac ttcgcgcgcg cctattcgac gtttctcagg gagcagaagg cggcgggcca
     1681 gaaggtcggt tcgatcgccg tggtgcatga gaacaccgag tacggtaatt ccgtcgccag
     1741 cgtcatcgtc gaccagtttg ccaaggacgg cctgtcggtg acccagaaga tcgcctattc
     1801 ggccaactcg agcgacgtgc agccccaggt gctgcagctc aaggagaaga atcccgacgt
     1861 cgtgatcttc atctcctaca cgtcggacgc gatcctctac accaagatga tgaaggagct
     1921 cggctggaag cccgcgatca tgatcgccga caacgccggc ttcaacgatc ccgccttcgt
     1981 caagagcatg tcctccctgg tcgagggcct ggtcaaccgt tcgaccttcg ccggcggcaa
     2041 gccgggcagc gtgccggcgc tcttcaacga gctctacaag aagaagaccg gcggcgacga
     2101 tctcgatgac gtgtcggcgc gcggcctgca gggcttcctg gtgatggccg atgccatcaa
     2161 ccgcgcgggc tcgaccgacc cggccaagat ccgcgacgcg ctcaaggcca ccgacctcaa
     2221 ggccgaccag atggtgacgg gctatgacgg cgtgaagttc gacgacaagg gccagaacgt
     2281 cctcgcctcg agcctggtca cgcagatgcg cggcggcaag tatgtcgcga tctggcccaa
     2341 ggcgcgcgcc accgaccagg tcgtcctgcc ttacaagggc tggtaagcga ccgcgggggg
     2401 tcgggaggaa ggcgagcggc gtgtcgctca cgctggtcca ggtgatcgtg agcgggctgc
     2461 tgctcggcgc ggtctatgcc ctgttctcgt ccggcctcac cctgatttgg ggcatgatga
     2521 acgtcgtcaa cttcgcgcac ggcgacttcg tcatgctggg catgtacgca gccgtcatgg
     2581 tgtggacggc gctgggcggc gggccgttcg ccgccgtgcc cgccgccgcc atgctgatcg
     2641 cgaccttggg catgctgagc tacttcctgc tggtgcgcca catcatgcgc gggccgatgc
     2701 tggcgcagat cctgggcacg ttcggcttgg cgctgttcct gcgctacgcc gccttctgga
     2761 ccttcggctc cgacttcaag accttgcctg acacgatggt cggcggctcc ttcgtgcttt
     2821 tgggcatccg tttcgaaggc tcgcgcgtgc tggcgggcgt cgtcggactc gccatcaccc
     2881 tcgtcctcca cttgatcctg acgcgcaccg ccatcggcag ccgcatgctg gcggtctccg
     2941 aggacgcgac cgcggcgcag ctcatgggca tccgcccgca gcgcatgcag gcgctggcct
     3001 ggggcatggc gggcgccgcc accggcatcg ccggcgcgct gatcgccaac ttcttctaca
     3061 cctcacccac ggtcggcgag acgctggcga tcctggcctt cgtcgttgtc tcgttcggcg
     3121 gcttcggcag cgtgctgggc gcgctggtgg ccggcctgat catcggcgtg gtggagtcgc
     3181 tctcggccta tctcgtcgga ccggtctaca aggacgtcat cgtctacgtt ctcttcgtgc
     3241 tggtgctctg gttcaggccg caaggcctga tgggcaaggc gtgaggcgct tcctcatccc
     3301 cggcgcgctg gtcgtgctgg cgctggtcta tcccctgctc acgtcgggct ttccggtcta
     3361 cgagcggctg ggcgccctgg tgttgctggc ggcgatcggc gcctcggcct ggaacatcgt
     3421 cggcggctat gccggccagg tgtcggtcgg ccattcggtg ttcttcggct tcggcgccta
     3481 ttcctcggtg gtggtctata cccatctcgg ctggccgccg atcgcaggcg cgccgctcgg
     3541 aatgctgctg agcgtggccg tggcggcggt gatcggcgtg ccgacgctgc gactctccgg
     3601 ccactatttc agcatggcca ccatcgccgt cgccgagctg gtgcgcgtgc tgagctcgac
     3661 ctcggagttc ctgggcgggg cgcaggggct gggcggaccg gccatgccgc gcaccgtgtt
     3721 cgacctctcc ttcatctcgg cgatgccgtt ctactacatc ttcctcgccg tgctggcctt
     3781 cctcctgggc ctcacctggt ggatggagcg cagccgcatc ggcttctatc tgcgcgccat
     3841 caaggattcc gagcgggcgg cgcgctcgct gggcgtctcg gccggccgct acaagctcta
     3901 tgcctacatg ctgagcggtg ccttcaccgc cctggccggt tccctctatc tctgcatgtt
     3961 cggcttcgtc gatcccgaat cggccttcgg catcctgatc tcggtcaaga tggtggtgat
     4021 ggcagccctc ggcggcgccg gccagctctt cggcccgctg gtcggcgcgc tgatcctggt
     4081 gccgctcgag gaactctcca acagctatct gggcggccgc ggcgcgggcc tcaccttcgt
     4141 ggtctacggc gccatcatcg tgatcatcgc ccgcttcctg ccgagcgggc ttctatcgct
     4201 gttcgaacgc cggccaacgc ggcccgccaa gtccgaaccc gccaagcccg agccggcgag
     4261 cggccatgct gattgaggct aaaaacgtca ccaaggcttt cggcgccttc aaggcggtcg
     4321 acgatgcgtc ggtgtcggtc gaggagggcg acatcctcgg gctgatcggg cccaacggcg
     4381 ccggcaagtc gaccttcttc aattgcctga ccggcgacct gccgctcacc tcgggcacgg
     4441 tgaggttcgc cggcgccgag gtcacgcgcc tgccgcccga ggcgcgggca gcactcggcc
     4501 ttgcccgcac gtttcaggtg ccgctcacct tcgaatcgat gtcggtgctc gacaacgcca
     4561 ccatcggcgc cctgctgcgc catgccaacg cgcgcgaggc gcgtgccaag gcgcgcgacg
     4621 tgctgcagcg ggtcgggctg ggtcccctgg ccgattcgcc cgccaaaagc ctcggcacgc
     4681 ccggccgcaa gcggctcgag atcgcccgcg cgctcgcctc ggagccccag gcgctgctgc
     4741 tcgacgaagc gatggccgga ctgacgccga ccgaggtgcg cgaggcgatc gagctggtgc
     4801 ggcgcatcca cggcggcggc atcaccatcg tgatcgtcga gcacatcatg gaagtgatcg
     4861 tgtcgctggc ccagaaggtc gtggtgttcc accagggacg cgagatcgcc cgcggcacgc
     4921 cgcgcgaggt gaccagcgac caggcggtga tcgaggccta tctcggccgc cgcaaggtgc
     4981 gccacgggac ggacccatga gcgcaccgct cttgcgcgtg tcccatctag aagtgcgcta
     5041 cggcgacctg atcggcgtgg ccgacgtgtc gctggaagtg ccggcgggct cggtcgtggc
     5101 gctgctcggt tccaacggcg ccggcaagac cacgacgctg aacgccatcg ccggcatcgc
     5161 cgtcgtgtcc aagggcactg tcgagttcgg cggcgagaac atcgccggcc agccggccta
     5221 tgccatcgtg cgcaagggcc tggcgctgtc gcccgagggc tggcggctgt tcacccagca
     5281 gagcgtcgag aacaacctga tgctgggcgc cacggcgctg gccgaccggg cccgcgtccc
     5341 gcgcctgctc gagcgcgtct acgcggtgtt tccccggctc gccgagcggc gtcgccagcg
     5401 cgccggcacc atgtcgggcg gcgagcgcca gatgctggcg gtcggccgcg ccctgatgag
     5461 cgagcccgag ctgctgctg
//
LOCUS       DASWGA010000406         7130 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_51347, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000406 DASWGA010000000
VERSION     DASWGA010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7130
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51347"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..576
                     /locus_tag="VF991_09760"
     CDS             <1..576
                     /locus_tag="VF991_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HEX9556769.1"
                     /translation="NTALLARSLHILPEFLGNRSPYADPQARAIVAGLDLDGDLESLE
                     RVFVSALCGLAYGLADVIDVMRAHGIPCRMMVISGGPSRSPLVRQIMADTTGLTVALP
                     STAEPVLLGAAMLGAVAGGAYKSLHEAMKGMSRLGPVTQATSPEMTRFHAAKRQVYAM
                     LHRLDQESRRAMAVLDVGRPKATDEGKAACC"
     gene            567..1505
                     /locus_tag="VF991_09765"
     CDS             567..1505
                     /locus_tag="VF991_09765"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HEX9556770.1"
                     /translation="MLLSCGDALIDFLPVRSGDGRDALLPVVGGSCLNVAIGMARLGA
                     PTGFVGGISTDLFGRMIADHAQASQVELSYATRSPRPTTLAFVRHVDGEPHYAFYDEA
                     TASRHWTYRPGTIPFAEIDAIHVGSTTLAHGDGAAHTLTMIEEARGSTTISFDPNCRP
                     NLVHDKAHYVRRMDQFSARAEIVKLSDTDFAYLYGGDDYSGKAKALFATGTQLLVVTR
                     GSCGAHAWHPRLGEIVVEAPPVDVIDTIGAGDSFQAGLLFALRAIGRIEAAALAHVSA
                     RELTRAMAFAAACAAITCGRSGADPPRLSEIATGPP"
     gene            complement(1507..2277)
                     /locus_tag="VF991_09770"
     CDS             complement(1507..2277)
                     /locus_tag="VF991_09770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX9556771.1"
                     /translation="MSTKHVVVGRDGAVLTVAMNRPEKKNALTHAMYGAMADALASAA
                     ADVSVRVILITGSGDAFTAGNDLGDFLNTPPAGAESPVLRFLAALSTAEKPVVAAVNG
                     LAIGIGTTMLLHCDLVYAARSAVFSAPFVNLALVPEAASSLLLPRRIGHAKAAELFLL
                     GGRLDAQQAEAPGLVAAVFDDAVLAAEVLQRARALAAKAPSAVRATKALMKRGEEPVA
                     ERMRAESAQFAVQLKSAELREAVKAFSEKRAPDFDRAA"
     gene            complement(2302..3486)
                     /locus_tag="VF991_09775"
     CDS             complement(2302..3486)
                     /locus_tag="VF991_09775"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEX9556772.1"
                     /translation="MVEAVIVSTARTGIGKAYRGALNNTEGPTLAGHVIAHAVKRAGI
                     EPGAVEDVVMGCAMQQGTTGVNVARKAAIRAGLPVTVAGTTIDRQCASGLQSIALAAR
                     SVMLDGVEVAVAGGVESISLVQNEHMNKYHAVDDELMAMKPEIYMSMLETAEVVAERY
                     KISRAAQDEYGLESQRRTAAAIQGGRFNDEIVPFATRMVVTDKETKAVSLQDVTIAKD
                     EGPRPDSTAEGLAKIKPVFEGKTISAGNASQLSDGASACVIMADNVAARMSLKPLGIF
                     RGFVAAGVEPDEMGVGPVAAVPRLLKRHGLKIDDIDLWELNEAYAVQVIYCRDKLGID
                     PDKLNVNGGSIAVGHPYGMTGSRLAGHILIEGRRRKAKYGVVTMCVGGGMGAAGLFEI
                     LV"
     gene            complement(3511..4314)
                     /locus_tag="VF991_09780"
     CDS             complement(3511..4314)
                     /locus_tag="VF991_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9556773.1"
                     /translation="MTDLRIFSYLPNPRLWKATIAARLCGVDVEIRGAKPAELKDWLW
                     DFDAHPLSPAERSGDLPKASVGRVGFKGGLLAKTDAFLDAHPFGTVPAAFSPDGTIGI
                     FESNSIMRTVARLGAERLQLYGGNPYEASRIDSFLDASLVFARDTQIYLLALRDQDFA
                     ADIHARAADAFAIYAAGIEQALKPDRAFLVGDKVSLADICFVSELCLFSNERLRRSTL
                     LKRGLAPILSDSWPQEFPRASGHFDRLSGHPAFAPDVRPYLQKLDARAA"
     gene            complement(4320..5021)
                     /locus_tag="VF991_09785"
     CDS             complement(4320..5021)
                     /locus_tag="VF991_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9556774.1"
                     /translation="MNRPVALVTGVGPGTGSAIVRRLSAGGYGIAMLARNRDRLAALE
                     TEIDNAKGYACDVTDETQLDTALAAARRDLGEPSVLIHNAVGGAWGSFQDIDPKVLNA
                     NFQVNTMALLHLARRLAPAMVEAGKGAIVVTGNTSALRGRPNFAGFAPTKAAQRILAE
                     AMARELGPKGIHVAYVVIDAVIDLAWTRKRYPEAPDGFFIKPAAIADEIWHVLQQDRS
                     AWSFNVEIRPFGEKW"
     gene            5197..6786
                     /locus_tag="VF991_09790"
     CDS             5197..6786
                     /locus_tag="VF991_09790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9556775.1"
                     /translation="MALSPVEAAAEELLSGLPQRLDHVFRPWAETSPHQPALIGDGKV
                     WTYGALPEIVDGAAAELRQHGVRPGDRVMIVSENSRALAALILAVSALDAWSVVVNPR
                     LSDREIDQIRDHCGARLLYYTIEVSELASAHARRHEAHEVEMGPLGTLAVSPVNETTV
                     PEAVEEDGARQVAALLYTSGTTGNPKGVMLTHRNILFNASLSRMLRKPTPEDVIYGVL
                     PMSHIVGFSIILAGTLIGGSAVHIVPKYDPAAFVNAVRDHGVSLMFGVPTTYQRLLEY
                     KAMAGLNALPRGRLRGLYVAGAPLDPTLKAMIEQEFGLPLLNAYGITECAPGISGVRA
                     EEPRHDTSVGTILPGIEVRLVGADGTPVADGEVGELHVRGPNVMRGYYRAAEATAAAI
                     DDEGWFNTGDLARFEGEALFIVGRTKELIIRSGFNVYPAEVEAVLSAHPAVVQSAVIG
                     RAVHANEEVVAYVQLLPGASATTDELMAHATRHLTAYKRPSEIVILEALPASSTGKIL
                     KHRLTAAAAAEGKHQSTPATA"
     gene            6796..>7130
                     /locus_tag="VF991_09795"
     CDS             6796..>7130
                     /locus_tag="VF991_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9556776.1"
                     /translation="MAARNATAAVIGAGDFIGAAIAKKFASEGFTVFAGRRNGDKLAP
                     LVADIEKAGGKISARSLDARNEADITSFLQEADRHAPLEVCIFNIGANVNFPILDTTE
                     RVFRKVWEMA"
BASE COUNT         1221 a         2392 c         2314 g         1203 t
ORIGIN      
        1 aacacggcgc tgctcgcgcg cagcctccat atattgcccg aattcctggg caatcgctcg
       61 ccctacgccg atccgcaagc gcgtgcgatc gtcgccgggc tcgatctcga cggcgacctc
      121 gagagcctgg agcgcgtgtt cgtgtccgca ttgtgcgggc tggcctacgg gctggccgac
      181 gtcatcgacg tgatgcgcgc gcacggcatc ccgtgccgaa tgatggtgat cagcggcggg
      241 ccgagccgca gtcccctggt gcgccagatc atggccgata cgacaggcct caccgtcgcc
      301 ctgccgtcga cggcagaacc ggtgctgctc ggcgccgcca tgttgggcgc cgtcgccggc
      361 ggcgcctata agtctctcca cgaggcgatg aagggaatgt cgcggctcgg acccgtgacg
      421 caggcgacct cgcccgaaat gacccgtttc cacgccgcca agcgacaggt ctatgcgatg
      481 ctgcatcggc tcgaccagga aagcaggcga gcgatggcgg tgcttgacgt cggccggccc
      541 aaggcgacgg acgagggaaa agccgcatgc tgctgagctg tggcgacgcg ctgatcgatt
      601 tcctgccggt tcggtcggga gacggtcgcg acgccctgct ccccgtcgtc ggcggttcct
      661 gcctcaacgt cgcgatcggc atggcgcggc tcggcgcacc gaccggcttc gtgggcggca
      721 tctcgaccga cctgttcggc cgcatgatcg ccgaccatgc ccaggcgtcg caggtcgaac
      781 tcagctacgc gacgcgaagt ccccggccca ccacgctggc gttcgtgcgc catgtcgatg
      841 gcgagccgca ctacgccttc tacgacgagg cgacggcgtc acgacattgg acgtatcgcc
      901 cgggaaccat ccccttcgcc gagatcgacg cgatccacgt cggatcgacg acgctggccc
      961 acggcgatgg tgccgcccac acgctgacga tgatcgagga ggcgcgcgga tcgaccacca
     1021 tctcgttcga tccgaactgt cgacccaacc tcgtccacga caaggcgcac tatgtccgcc
     1081 gcatggacca attttccgcg cgcgccgaaa tcgtcaagct gtcggatacc gacttcgcct
     1141 atctctatgg cggagatgac tattcaggaa aggcgaaggc cctctttgcg accggcaccc
     1201 agctgctggt cgtcacgcgc ggcagttgcg gtgcccatgc ctggcacccc cggttgggag
     1261 agatcgtcgt cgaggcgcct ccggtcgacg tcatagacac gatcggcgcg ggcgacagct
     1321 tccaagccgg gcttctgttc gctctacgag ccatcggtcg gatcgaggct gcagcgctcg
     1381 cccacgtaag cgcccgtgaa ctgacgcgcg cgatggcatt tgctgccgcc tgcgcggcca
     1441 tcacctgtgg tcgttccggc gccgatccgc cgcgactttc cgaaatcgcc acgggaccgc
     1501 cttaagctag gccgcccggt cgaagtccgg cgcgcgcttc tcgctgaacg ccttgacggc
     1561 ctcgcgtagc tcggccgact tgagctgcac ggcgaattgc gccgattcgg cgcgcatgcg
     1621 ctcggccacc ggctcctcgc cgcgcttcat caacgccttg gtcgcccgca ccgcgctcgg
     1681 cgccttggcc gcgagcgcac gcgcacgctg caggacctcg gccgccagca ctgcatcgtc
     1741 gaacaccgcc gccaccagcc cgggcgcctc ggcctgctgg gcgtccaggc ggccgcccag
     1801 caggaacaat tcggcggcct tggcgtggcc gatgcggcgc ggcagtaaca gtgacgaggc
     1861 ggcctcgggg accagcgcca ggttgacgaa gggcgccgag aagacggcgg accgcgccgc
     1921 gtagaccagg tcgcaatgca gcaacatcgt ggtgccgatg ccgatggcga gcccgttgac
     1981 cgcggcgacg accggcttct cggccgtcga cagcgcggcc aggaagcgca gcacgggcga
     2041 ttcggcgcca gccggcggcg tgttgaggaa atcgccgagg tcattgcccg ccgtgaacgc
     2101 atcgccgctg ccggtgatca ggatcacgcg aaccgacacg tcggccgccg cactggcgag
     2161 cgcgtcggcc atcgcgccgt acatcgcatg cgtgagcgcg ttctttttct ccggccggtt
     2221 catggcgacc gtgaggacgg cgccgtcccg gccgaccacg acatgctttg tgctcatttc
     2281 aaaacctccc tcaagcgacg atcaaacgag aatttcgaac aagccggcgg cgcccatgcc
     2341 gccgccgacg cacatggtca cgacgccgta cttggccttg cggcggcggc cctcgatcag
     2401 gatatggccg gcaagccgcg atccggtcat gccataggga tggccgaccg cgatcgaccc
     2461 gccattgacg ttcagcttgt ccggatcgat gccgagctta tcacggcagt agatgacctg
     2521 cacggcatag gcctcgttca gttcccaaag atcgatgtcg tcgatcttga ggccatggcg
     2581 cttgagcagg cgtggcaccg cggcaacggg gccgacgccc atttcatcgg gctcgacgcc
     2641 cgcggcaacg aagccacgga agatgccgag cggcttgagg ctcatccgcg ccgcgacgtt
     2701 gtcggccatg atcacgcagg ccgacgcccc gtcggacagc tggctcgcat tgcccgcact
     2761 gatggtcttg ccttcgaaca cgggcttgat cttggccaat ccttcggccg tgctgtccgg
     2821 acgcggccct tcgtcctttg cgatcgtcac gtcctgaagc gagaccgcct tggtctcctt
     2881 gtccgtcacc accatcctgg tcgcgaaggg cacgatctcg tcgttgaagc ggccgccctg
     2941 gatcgccgcc gcggtgcggc gctggctctc aaggccgtac tcgtcctggg cggcgcgcga
     3001 aatcttgtag cgctcggcga ccacttcggc ggtctcgagc atcgacatgt agatctcggg
     3061 cttcatcgcc atcagttcgt catcgacggc gtggtatttg ttcatgtgct cgttctggac
     3121 gaggctgatc gattccaccc cgccggcgac cgccacttcg acgccgtcca gcatgaccga
     3181 gcgcgccgcg agcgcgatcg actgcaggcc ggaagcgcat tgccggtcga tcgtcgtgcc
     3241 ggccaccgtc accggcagac cggcccggat tgccgctttg cgcgcgacat tcacgcccgt
     3301 cgtgccctgc tgcatggcgc agcccatcac cacgtcctcg accgcgcccg gttcgatgcc
     3361 ggcgcgtttg accgcatggg cgatgacgtg tccggccaag gtagggcctt cggtgttgtt
     3421 gagagcgccg cgataggcct tgccgatgcc cgtacgggcc gtcgagacga tgactgcttc
     3481 aaccatgccg gttcctttcc tgtgtcgtgc tcaggccgct cgcgcgtcca acttctgcag
     3541 ataggggcga acatcgggtg cgaaggccgg atgcccgcta agtcggtcga aatggccaga
     3601 ggcgcgggga aattcctggg gccagctgtc ggagagaatt ggcgccagtc cgcgcttgag
     3661 gagcgtcgag cgacgaagac gttcgttcga gaacaggcaa agctctgata cgaagcaaat
     3721 gtcggccagc gagaccttgt cgccgaccag aaacgcgcga tcaggtttca gcgcctgctc
     3781 gatgccggcg gcatagatgg cgaaggcgtc ggcggcgcgc gcgtggatgt cggcggcgaa
     3841 gtcctgatcg cgcaaggcga gaagatagat ctgggtgtcg cgggcaaaga ccaggctggc
     3901 gtcgaggaag ctgtcgatgc gcgaggcctc ataaggattg ccgccgtaga gctgcagtcg
     3961 ctcggcgccc agccgggcga cggtgcgcat gatgctgttg gactcgaaga tgccgatcgt
     4021 gccatccggg ctgaaggccg ccggcacggt gccgaacgga tgtgcgtcaa gaaacgcatc
     4081 ggtcttggcg agaagcccgc ctttgaagcc gacgcggccc acgctcgcct tcggcaagtc
     4141 cccgctccgc tctgctggcg acagcggatg ggcatcgaaa tcccacagcc aatccttcaa
     4201 ttcggccggc ttggcgccgc ggatctcgac atcgacgccg cacaggcgcg cggcgatcgt
     4261 cgccttccag agtcgcgggt tcggcagata ggaaaagatg cgaaggtcgg tcattggctt
     4321 caccatttct cgccgaaggg ccgaatttcg acgttgaagg accaggcgct cctgtcctgc
     4381 tgaaggacgt gccagatttc gtcggcgatg gcggcgggtt tgatgaagaa gccgtcgggc
     4441 gcctcggggt agcgcttgcg cgtccaggcg agatcgatca cggcgtcgat gacgacgtat
     4501 gccacatgaa ttcccttggg ccccaactca cgcgccatgg cctcggccag gatgcgctgc
     4561 gccgccttgg tcggcgcgaa gcccgcgaag ttcggccggc cgcgcaacgc ggatgtattg
     4621 ccggtcacga cgatcgcgcc cttgccggcc tcgaccatcg ccggcgcgag ccgccgcgcc
     4681 agatggagaa gcgccatggt gttgacctgg aaattggcgt tgaggacctt gggatctatg
     4741 tcctggaagc tgccccaggc gccgcccacc gcgttgtgga tcagcaccga aggctcgccg
     4801 aggtcgcgcc gcgccgcggc cagcgccgta tcgagctggg tctcgtcggt gacatcgcaa
     4861 gcgtagccct tggcgttgtc gatctcagtc tcgagggcgg caagacggtc tcgattgcgg
     4921 gcaagcatgg caatgccata gccaccggct gaaagccgac gcacgatcgc gctgccggtg
     4981 cctggaccga cacccgttac cagggccacc ggacggttca tctcttcgct ccagcgcttg
     5041 aacaatgacg ctcggaccat cccatagttc atgtcgaaac gacactgttc aaacagcaaa
     5101 aactcatgat agcccgagta gcgtcgtatt cttctggatt gacaggttct aaaaaaacac
     5161 tgatgttcgc cgcaaatgaa tgtggcggag gaaacaatgg cgttgtcacc agtcgaagcc
     5221 gctgccgaag agctgttgtc cgggctgccg caacggctgg atcacgtctt ccggccgtgg
     5281 gccgagacat cgccccatca gcctgccttg atcggcgacg gcaaggtctg gacctatggc
     5341 gcactccccg aaatcgtcga cggcgcggcg gccgagcttc gacagcacgg cgtccgtcct
     5401 ggcgaccgcg tcatgatcgt cagcgagaac agccgggcac ttgccgctct cattctggcg
     5461 gtgtcggcgc ttgacgcctg gtcggtggtg gtcaatccgc gcctgtccga ccgcgagatc
     5521 gaccagattc gcgatcattg cggggcgcgt ctgctgtact acaccatcga ggtctccgag
     5581 ctcgcctcag cccatgcccg ccgtcacgag gcgcacgagg tcgagatggg cccgctcggc
     5641 acgctggccg tcagcccagt caatgagacg acggtgcccg aggcggtcga agaggacggc
     5701 gcccggcagg tcgccgcctt gctctacacg tcgggcacga cgggcaatcc gaaaggcgtg
     5761 atgctcacgc atcgcaacat cctgttcaat gccagcctgt cgcggatgct gcgcaagccc
     5821 acgccggaag acgtgatcta cggcgtcctg ccgatgtccc acatcgtcgg cttttccatc
     5881 atcctggcgg gaaccctgat cggcggcagc gccgtgcaca tcgtgccgaa atacgaccct
     5941 gcagccttcg tcaacgccgt gcgcgatcat ggcgtttcgc tgatgttcgg ggtaccgacg
     6001 acctatcagc gcctgctgga atacaaggcg atggctgggt tgaacgccct gccgcgtggc
     6061 cggctgcgtg gcctctacgt cgccggtgcc ccgctcgatc cgacgctcaa agcgatgatc
     6121 gagcaggaat tcggcctgcc gctgctcaac gcctacggca tcaccgagtg cgcccccggc
     6181 atctccggcg ttcgcgccga ggagccgcgt cacgatacct cggtgggcac gatcctgccc
     6241 ggcatcgagg tgcgcctcgt gggcgctgat ggcacgccgg tggccgacgg cgaagtcggc
     6301 gagttgcacg tgcgcggtcc caacgtgatg cgcggctact atcgcgccgc cgaggccacc
     6361 gcggcggcga tcgacgacga gggctggttc aacaccggcg acctggcgcg cttcgaaggc
     6421 gaggcgctgt tcattgtcgg ccggacgaag gaactcatca tccgatcggg cttcaacgtc
     6481 tatccggccg aggtcgaggc ggtgctgagc gcccacccgg cggtcgtcca gtccgccgtc
     6541 atcggccgcg ccgtccatgc caacgaagag gtcgtggcct acgtgcagtt gctgcctggc
     6601 gcgagcgcca ccacggatga gctgatggcg cacgccaccc gtcacctgac ggcctacaaa
     6661 agaccgagcg agatcgtgat cctggaggcg ctgccggcgt cgtccacggg caagatcctg
     6721 aaacatcgcc tgacggcagc ggcagccgcc gaaggcaaac accaatccac accggcgact
     6781 gcgtaggagg atcaagtggc agcaagaaat gcgacggcag cggtcatcgg cgcgggcgac
     6841 ttcatcggcg ccgcgatcgc caaaaaattc gcatcggagg gcttcaccgt cttcgccggc
     6901 cggcgcaacg gcgacaagct cgcgccgttg gtcgccgaca tcgagaaggc cggcggaaag
     6961 atctccgctc gctcgctcga tgcccgcaac gaagccgata ttacctcatt cctgcaggag
     7021 gccgaccggc acgcgccgct cgaggtctgc attttcaaca tcggggcgaa cgtcaatttc
     7081 ccgatcctcg acacgacaga gcgcgtcttt cgcaaggtct gggaaatggc
//
LOCUS       DASWGA010000407         1864 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_174065, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000407 DASWGA010000000
VERSION     DASWGA010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174065"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1103
                     /locus_tag="VF991_09800"
     CDS             <1..1103
                     /locus_tag="VF991_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007769641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX9556777.1"
                     /translation="ETFDYGTHRFTDAIDSDGHGNGPFHIRLALTRERGANGEDRFIF
                     DATETDDQSPGPVNLLLNPDVPGTALSMFYLGGDPAQVCNAGGAQALDEVRLREGSLL
                     WPRFPAPLGMRGLTLMRFLAAVNGLINVAGGKAPAAHSAYVISFLRGTFRDDEGELKP
                     FLMSDGIGVGWGARPYADGTDAVYFVAQENYPVEFLENGYPVRLRSYGILTDSCGAGR
                     YRGGCGIVREYDILAEEGVLAIRIDSVKNPPWGIAGGMAGGPGRILVNPGTNHERLLP
                     PLSDGNVLKGGDVLRIETGGGGGHGHPFDRPPEAVLEDVLSGFVSADAAKRLYGVALS
                     DGAIDQAATAKLRARRPATKAFHRHAYVDSLA"
     gene            1096..>1864
                     /locus_tag="VF991_09805"
     CDS             1096..>1864
                     /locus_tag="VF991_09805"
                     /inference="COORDINATES: protein motif:HMM:NF017215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9556778.1"
                     /translation="MPDTSLAVAVDIGGTFTDIALHDAKSGQIWRAKTPSVPADPSQA
                     FLTGVRIALEEAGRRAPMLGRVLHGTTVATNMILEGKGARTALVTTAGFRHVLTIGRQ
                     DIPRRANYLAWVKPARPVPASRVLEVRERIGSGGVVIEKLDEVSVQAAAEACRALGVE
                     AVAICLLHSFANPAHERRVAEMLRKILPGVAVTASSDVLPVVREYERSLATVLNAIVM
                     PGVATYVARIERRLADEKVTAPLLFMQSNGGVAGGATI"
BASE COUNT          279 a          671 c          633 g          281 t
ORIGIN      
        1 ccgagacctt cgactacggc acccaccgct tcaccgatgc catcgactcg gacggtcatg
       61 gcaatgggcc gttccacatc aggctggcgc tgactcgcga gcgcggggca aatggcgagg
      121 accgcttcat cttcgacgcc accgaaaccg acgatcagtc gcccggcccg gtcaacctgc
      181 tgctcaatcc cgacgtgccg ggcaccgcgc tctccatgtt ctacctgggc ggcgatccgg
      241 cgcaggtgtg caacgccggc ggcgcgcaag cgctcgacga ggtgcgcctg cgcgagggct
      301 cattgctgtg gcccaggttt cccgcgccgc tcggcatgcg cgggctcacc ctgatgcgtt
      361 tcctcgccgc ggtgaacggc ctgatcaacg tcgccggcgg caaggcgccc gccgcgcact
      421 cggcctacgt gatctccttc ctgcgcggca ccttccgcga cgacgagggc gagctaaaac
      481 cgttcctgat gtccgacggc atcggtgtcg gctggggcgc ccgaccctat gccgacggca
      541 ccgacgcggt ctatttcgtg gcgcaggaga actaccccgt cgagtttttg gagaacggct
      601 atcccgtgcg gctgcgcagc tacggcatcc tgaccgactc ctgcggcgcg gggcggtacc
      661 gcggcggctg cggcatcgtg cgcgaatacg acatcctggc cgaggagggc gtgctggcga
      721 tccgcatcga cagcgtcaaa aacccgccgt ggggcatcgc cggcggcatg gcgggcggcc
      781 ccggccgcat cctggtcaat cccggcacca accacgagcg cctcctgccg ccgttgtcgg
      841 acggcaacgt gctgaagggt ggcgacgtgc tcaggatcga gaccggcggc ggcggcggcc
      901 atggccatcc cttcgatcgc ccgcccgagg cggtgctgga ggacgtttta agcggcttcg
      961 tgagcgccga tgccgccaag cgcctttacg gcgtcgccct gtcggacggc gccatcgacc
     1021 aggccgcgac cgccaagctg cgcgcccggc ggccggcgac caaggctttt catcgccacg
     1081 cctacgtcga cagccttgcc tgacacctcg ctcgcggtcg ccgtcgacat cggtggcacc
     1141 ttcaccgata tcgccctgca cgacgccaag agcggccaga tctggcgggc caagacgccg
     1201 agcgtgcccg ccgatcccag ccaggctttc ctgaccggcg tgcgcatcgc tctggaagaa
     1261 gccggccgcc gggcgccgat gctggggcgc gtgctgcacg gcaccaccgt ggcgaccaac
     1321 atgatcctgg aaggcaaagg cgccaggacc gcgctggtga cgacggcagg cttccgccac
     1381 gtcttgacca tcggccggca ggacatcccg cggcgcgcca actacctcgc ctgggtgaag
     1441 cccgcgcgcc ctgtccccgc ctcgcgcgtg ctcgaggtca gggagcgcat cggctcgggc
     1501 ggcgtggtga tcgaaaagct cgatgaggtg agcgtgcagg ccgcggcaga ggcgtgccgc
     1561 gcgctcggcg tcgaggcggt ggcgatctgc ctgctgcact cctttgccaa tccggcacac
     1621 gagcggcgcg tggcggagat gctgcgcaaa atcctgcccg gcgtcgcggt gacggcttca
     1681 tccgacgtcc tgcccgtggt gcgcgagtac gagcgctcgc tggccacggt gctgaacgcc
     1741 atcgtcatgc ccggcgtggc gacctacgtg gcgcgcatcg aacggcgcct ggccgacgaa
     1801 aaggtgaccg cgccgctcct gttcatgcag tccaacggcg gtgtcgcggg cggcgccacc
     1861 atcc
//
LOCUS       DASWGA010000408         5498 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1311969, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000408 DASWGA010000000
VERSION     DASWGA010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5498
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1311969"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..635)
                     /locus_tag="VF991_09810"
     CDS             complement(<1..635)
                     /locus_tag="VF991_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010660006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9556779.1"
                     /translation="MAKPAIKPKIESLAGSKSSPVSAEQLKSYYRDMLLIRRFEERAG
                     QLYGMGLIGGFCHLYIGQEAVVVGMQSIIETGDSIVTSYRDHGHMLAAGMDPKGVMAE
                     LTGRSTGYSKGKGGSMHMFSREKNFYGGHGIVGAQVPIGTGLAFAHTYNGKKNVSLTY
                     FGDGSANQGQVYEAMNMAALWKLPVVYIIENNRYGMGLIGGFCHLYIGQEAV"
     gene            complement(855..1154)
                     /locus_tag="VF991_09815"
     CDS             complement(855..1154)
                     /locus_tag="VF991_09815"
                     /inference="COORDINATES: protein motif:HMM:NF016839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEX9556780.1"
                     /translation="MLLRPRQILAPIIFAMMFGYFGYHLVNGDRGLLAMAHLQREVLL
                     AEQNLAEAETTRKIWERRVAALRNQSLDPDMLDERARMLLNFSRKDDIIVFTPTR"
     gene            complement(1217..1942)
                     /locus_tag="VF991_09820"
     CDS             complement(1217..1942)
                     /locus_tag="VF991_09820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanyl-tRNA editing protein"
                     /protein_id="HEX9556781.1"
                     /translation="MHLFCHEHPETLVVQTIVAAAWPGKVALVETPFYPGGGGQLADR
                     GLLRCEGGEAKVIGFEYSAGKLWHLLDSQAELAGTVEAAVDPAFRRTMRQLHTGTHIL
                     NAFVFQSFDGALVTGVQMYEDGSARMDFDVPGADNDRLRALEAPINDVIVQDIAVNFA
                     YVPMAEAQAERGLIRSRSVAPPPTPDGKIRIVEIAGLDRQACGGTHLTSTGDSPAIRI
                     VKIDNKGRHNRRVRIALAEPKSL"
     gene            complement(2043..2873)
                     /locus_tag="VF991_09825"
     CDS             complement(2043..2873)
                     /locus_tag="VF991_09825"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX9556782.1"
                     /translation="MARVDPKNSTQYWWDRHLTGLSLLRADFTTHEYPPHTHEALVVA
                     VTEQGGSLIKSRGQVEEAHAATLFVFNPAEPHAGWMGWSERWRYRSLYLTQAALDQVA
                     EGLGIEQVPYFTRNMFRDGDLIDGFLAMHRAIEQGRDVFHERELLIGTFGRLFQRHGS
                     SGGRIAPVPRDRVVLERVKERMRGDYAQDLRLEELAQEVGLTTFQLIGLFKRTTGLTP
                     HAYLTQIRLSMACRHLRHSRAIAEVATDVGFYDQSALTKHFKRCYGITPLQFARAAAA
                     "
     gene            2968..3279
                     /locus_tag="VF991_09830"
     CDS             2968..3279
                     /locus_tag="VF991_09830"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEX9556783.1"
                     /translation="MIARIWRGRAATAANADVYSRHVTKTVFPSLTELAGHRGAWLLR
                     REVDGRTEFLALTLWESRQAIEAFAGRDIGKAVVEPAARAVLAEFDDFASHYEVAFKT
                     P"
     gene            complement(3266..4555)
                     /gene="eno"
                     /locus_tag="VF991_09835"
     CDS             complement(3266..4555)
                     /gene="eno"
                     /locus_tag="VF991_09835"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEX9556784.1"
                     /translation="MSAIAEVRAREILDSRGNPTVEVEVELDSGAMGRAAVPSGASTG
                     AHEAVELRDGDKKRYGGKGVLKAVQAVNGEIMDLLSGLDALEQIKIDRALIALDGTPN
                     KGRLGANAILGVSLAVAKAAAMECGLPLYRYVGGSQASLLPVPLMNIINGGVHADNPI
                     DIQEFMIMPVKADRFADALRMGSEVFHALRSQLKEAGHNTNVGDEGGFAPNLASADEA
                     LTFVMKSIERAGYKPGEDIMLALDPASTEFFKDGKYRMEGEGKVLDAASMVDYYADLV
                     KRYPIVSIEDGMAEDDMAGWKAITDKLGKKIQLVGDDLFVTNPTRLTDGIRDGLANAI
                     LVKVNQIGTLSETMEAVSIARHAAYGAVMSHRSGETEDSTIADLAVATNCGQIKTGSL
                     SRSDRLAKYNQLLRIEEQLGTQARYAGTSVLRGSKAS"
     gene            complement(4745..>5498)
                     /locus_tag="VF991_09840"
     CDS             complement(4745..>5498)
                     /locus_tag="VF991_09840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HEX9556785.1"
                     /translation="APVAATRPAAPAPDYTTVLQSPEPDRRHIQESLRTLDKYNGPID
                     GNLQSEATAKAISDWQKGHGAHPVGKLTPQEAQQLNAEAAKAPIRRIEPPPQTAAAPA
                     TPGPSNADALKALQARLAERRKAAEPKADAAAQSLIRDLKAYVAADGKGVAGDQFAAF
                     AKWYADTKAAGRTVGDIAPIIDDYGDAKVGAAVASEVLFETKQGSTNRSHCLVFTWIE
                     GNPRKNAQAFSCDDIAGVEKWKTDQALKSAWR"
BASE COUNT          875 a         1768 c         1817 g         1038 t
ORIGIN      
        1 acggcttcct gaccgatata gaggtggcag aagccgccga tcaggcccat gccgtagcgg
       61 ttgttctcga tgatgtagac gaccggaagc ttccacaggg cggccatgtt catcgcttcg
      121 tagacctggc cctggttggc gctaccgtcg ccgaaatagg tcagcgagac gttctttttg
      181 ccgttgtacg tgtgcgcgaa ggcaaggccg gtgccgatcg gcacttgggc gccgacgatg
      241 ccgtggccgc cgtaaaaatt cttctcgcgg ctgaacatgt gcatcgagcc gcccttgccc
      301 ttggaatagc cggtgctgcg gccggtcagc tcggccatca cgcccttggg gtccatgccg
      361 gcggccagca tgtggccgtg atcgcggtag gaagtgacga tcgagtcccc ggtctcgatg
      421 atcgactgca tgccgaccac gacggcttcc tgaccgatat agaggtggca gaagccgccg
      481 atcaggccca tgccgtagag ctgtccggca cgctcctcga agcggcggat cagcagcatg
      541 tctcggtagt atgatttgag ctgctcggca ctcacgggcg acgacttcga tccggcaaga
      601 gattcgatct tcggcttgat agccggcttc gccataggat ccccctcgat agccccgttg
      661 gcttatacca ttgcccaagg cgatgtggtt gatctagcag gaaaaaccag accgtcggcg
      721 ggtgcggcgc agcaattgag agattgtttg caagcagacg tctacgccgg acagtttgtt
      781 tcaggcggcc gcgaagcgaa ccttgatcag cgcgtcatct ctgcgccagg tgcgtcaccg
      841 cggctggcgc atcttcaacg cgttggcgtg aagacgatga tgtcgtcctt gcgcgagaag
      901 ttcagcaaca tgcgcgcgcg ctcgtcgagc atgtcgggat cgaggctctg gttgcgcaac
      961 gccgcgacgc gccgctccca gatcttccgt gtcgtttcgg cttctgccag gttctgctcg
     1021 gcgagcagaa cctcgcgctg cagatgcgcc atcgccaaca gaccgcgatc accgttcacc
     1081 aggtgatagc cgaaatagcc gaacatcatg gcgaagatga tcggagccag aatctgacgc
     1141 ggtctcaaca acatatgccg atttcctcgt ggcatatggc aacatatggt gtccgcgagt
     1201 caagtttttc ggtgtgtcag aggctcttag gctccgccag ggcgatgcgg acacgccggt
     1261 tgtggcggcc cttgttgtcg atcttgacga tgcggatcgc gggcgagtcg cccgtcgagg
     1321 tgaggtgcgt gccgccacag gcctgccggt cgaggccggc gatttcgacg atgcggatct
     1381 tgccgtccgg cgtcggtggc ggcgccaccg agcgactgcg gatcaggccg cgttcggcct
     1441 gcgcttccgc catcggcaca taggcgaagt tgaccgcgat atcctggacg atgacgtcgt
     1501 tgatcggtgc ttcgagcgcg cgcaggcggt cattgtcggc gccgggcacg tcgaaatcca
     1561 tgcgcgccga gccgtcctca tacatctgca cgccggtgac cagcgccccg tcgaagctct
     1621 gaaagacgaa agcattgagg atgtgggtgc cggtatggag ctggcgcatg gtccgccgga
     1681 acgccggatc caccgctgcc tcgacggttc ccgccagttc ggcctggctg tcgagcagat
     1741 gccagagctt gccagccgag tactcgaagc cgatgacctt ggcttcgccg ccctcacagc
     1801 gcagcaggcc gcgatcggcg agctggccac cgccgccggg atagaacggg gtctcgacca
     1861 gcgccacctt gcctggccac gcagccgcca cgatcgtctg cacgaccagc gtctcgggat
     1921 gctcatggca gaaaaggtgc atgcgccacg gtttatcgcc ttgagcccga ccggtattgg
     1981 cgaaaattgc ccgccggaat aagcaggcac cattgggggg taaaggctgt ttcggcgccg
     2041 cctcaggcgg cggcggcgcg ggcgaattgt aagggtgtga tgccgtagca gcgcttaaaa
     2101 tgcttggtca gggcgctctg gtcataaaag ccgacatccg tcgccacctc ggcgatcgcc
     2161 cgggaatgcc tgagatgccg gcacgccatg ctgaggcgga tttgcgtcaa ataggcatgc
     2221 ggcgtcagcc cggtcgtccg cttgaacagg ccgatcagct ggaaagtcgt cagtccgacc
     2281 tcctgcgcca gctcttccag ccggagatcc tgggcatagt cgccgcgcat gcgctctttc
     2341 acgcgttcca acacgacccg gtcgcgcggc accggcgcga tccggccgcc actgctgcca
     2401 tggcgctgga acaggcggcc gaaggtgccg atcagcagtt cgcgctcgtg gaagacatcg
     2461 cgtccctgct cgatggcgcg gtgcatggcc aggaagccgt cgatcaggtc gccgtcgcgg
     2521 aacatgttgc gggtgaagta cggcacctgc tcgatgccga gcccttcagc cacctgatcg
     2581 agcgcggctt gtgtgaggta gagcgagcga tagcgccaac gctcgctcca gcccatccag
     2641 ccggcgtgcg gctccgccgg attgaacacg aacagcgtgg cggcatgggc ttcctcgacc
     2701 tggccgcggc tcttaattag cgagccgccc tgctccgtca cggcgacgac cagcgcctcg
     2761 tgggtgtgcg gcgggtattc gtgggtcgtg aagtcggcac gcaacaggct gaggccggtt
     2821 aaatgccggt cccaccaata ctgggtggag ttcttcggat cgacgcgcgc catggtcaaa
     2881 aataccggcc ccggcaattt tagccaatac cgctggctga cccgtgtcta gccttcatcg
     2941 agccggactt cgaggaagtg acctgacatg atcgcgcgca tctggcgggg acgggccgcg
     3001 actgcggcca atgctgacgt ctattcccgg catgtgacta aaaccgtctt tccctcgctc
     3061 accgagctcg ccggccatcg cggcgcctgg ctgctgcgcc gcgaggtcga cggccggacc
     3121 gaattccttg ccctgacgct ctgggaatcg cggcaggcga tcgaggcctt tgccggccgc
     3181 gacatcggca aggccgtcgt cgagcccgcg gcgcgcgcgg tgctggcgga gttcgacgac
     3241 ttcgccagcc actacgaggt ggcgttcaag acgccttaga cccgcgcagg accgacgtcc
     3301 cggcgtaacg cgcctgggtg ccgagctgct cctcgatgcg caggagctgg ttgtacttgg
     3361 cgagccgatc cgaacgcgac agcgagccgg tcttgatctg accgcagttg gtcgcgacgg
     3421 caaggtcggc gatggtcgag tcctcggtct cgccggaacg gtgggacatt accgcgccgt
     3481 aggccgcgtg gcgcgcgatc gacacggctt ccatggtctc gctgagcgtg ccgatctggt
     3541 tcaccttcac caggatggcg ttggccaggc catccctgat gccgtcggtc agccgcgtcg
     3601 ggttggtcac gaacaggtcg tcgcccacga gctggatttt cttgccgagc ttgtcggtga
     3661 tcgctttcca gccggccatg tcgtcctcgg ccatgccgtc ctcgatcgac acgatggggt
     3721 agcgcttcac caggtcggcg tagtagtcga ccatgctggc ggcatcgagc accttgccct
     3781 cgccttccat cctgtacttg ccgtccttga aaaactcggt cgaagccggg tcgagcgcca
     3841 gcatgatgtc ctcgcccggc ttgtagcccg cccgttcgat cgacttcatg acaaaagtga
     3901 gcgcctcgtc ggccgaggcg aggttgggcg cgaagccacc ctcgtcgccc acgttggtgt
     3961 tgtggccagc ttccttgagc tggctgcgca gcgcatggaa gacctccgaa cccatgcgca
     4021 aggcgtcggc gaaacgatcc gccttcaccg gcatgatcat gaattcctgg atgtcgatcg
     4081 ggttgtcggc atggacgccg ccattgatga tgttcatcag cggcaccggc aggagcgagg
     4141 cctggctgcc gccgacatag cgataaagcg gcaggccgca ctccatcgcc gccgccttgg
     4201 cgaccgcgag cgaaacgccc aggatggcgt tggcgcccag ccggcccttg ttgggcgtgc
     4261 cgtcgagcgc gatcagggcg cggtcgatct tgatctgctc gagcgcgtcg aggccggaca
     4321 acagatccat gatctcgccg ttcaccgcct ggaccgcctt cagcacgccc ttgccgccgt
     4381 agcgtttctt gtcgccgtcg cgcagctcga ccgcctcgtg ggcgcccgtc gaggcgcccg
     4441 acggcacggc cgctcggccc atcgcgccgc tgtcgagctc gacttcgacc tcgaccgtgg
     4501 gattgccgcg gctgtcgagg atttcgcggg cgcggacttc ggcaatggca ctcatcgggc
     4561 ggcactcctt ttggcgcggc ctgtctagcg gcacgtccgg tgcggagcaa gtgactgtaa
     4621 ggtggcggtc ggcagattgg cgcgctcatg attttccgga ccgcgcgcat cctgcgcgct
     4681 catgaggcgc atatgaatgc gctgacttga gcgagccaga ggctcgcggt ccggaaaact
     4741 atgatcagcg ccaggcgctc ttcagcgcct ggtcggtctt ccacttttcg acgccggcga
     4801 tgtcgtcgca ggagaaggcc tgggcgttct tgcgcggatt gccctcgatc caggtgaaga
     4861 ccaggcagtg cgaccggttg gtgctgccct gcttggtctc gaacagcact tcgctcgcca
     4921 ccgcggcgcc caccttggca tcgccgtagt cgtcgatgat gggtgcgatg tcgcccaccg
     4981 tgcggcccgc cgccttggtg tcggcgtacc acttggcgaa ggccgcgaac tgatcgcccg
     5041 ccacgccctt gccgtcggcc gcaacatagg ccttgagatc gcggatcagg gactgcgccg
     5101 ccgcgtcggc cttgggttcg gcggccttgc gccgctcggc gagccgggct tgcagcgcct
     5161 tcagcgcgtc ggcattcgac ggaccgggcg tggccggcgc cgcggccgtc tggggcggcg
     5221 gctcgatgcg ccggatcggc gccttggccg cttccgcgtt gagctgctgg gcctcctgcg
     5281 gcgtcagctt gccgacggga tgcgcgccat gtcccttctg ccagtcgctg atcgccttgg
     5341 ccgtcgcctc ggactgcagg ttgccgtcga tcgggccgtt gtacttgtcg agtgtgcgca
     5401 acgattcctg gatgtgcctg cggtcgggtt cggggctctg cagcaccgtc gtatagtccg
     5461 gcgccggtgc agcgggccgc gtcgccgcga cgggcgct
//
LOCUS       DASWGA010000409         4459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_427633, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000409 DASWGA010000000
VERSION     DASWGA010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4459
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427633"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="VF991_09845"
     CDS             <1..354
                     /locus_tag="VF991_09845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HEX9556786.1"
                     /translation="GGGYREEESGLAKLAFAWMLRESELHGLMVDDAAKQRELGNAGP
                     GKARPDANARMHSSMTWLWCLAEFVPMVSGLRGKIRINLFRRRFVPAGALIHESVFRH
                     TGYDRPLPQQRRIET"
     gene            complement(355..1233)
                     /locus_tag="VF991_09850"
     CDS             complement(355..1233)
                     /locus_tag="VF991_09850"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9556787.1"
                     /translation="MSELWIQPTGGALAADVHGVDLSKPLSDAAFARIAEAWAEHLVL
                     RFSGQKLDDPMLMKFSARFGELDRVPVAAANFDRTDSGLVKDAQEWVAVISSVVKDGK
                     PVGGLGSYELVWHTDMSYNPLPPRASLLYALEVPPDGGNTGFLNMYAAYETLPGELKR
                     VIEGKTCIHDSSRNSAGELRKGFQTTLDPRHTPGAVHPLVRLHPVTKRKTLFLGRRPG
                     AYIHGLSVEESEKLLNAVWAHATQERFAWYQKWRSGDLVLWDNRCVMHRRDAFDESLR
                     RLMHRTQIVGEPVLAG"
     gene            complement(1230..2375)
                     /locus_tag="VF991_09855"
     CDS             complement(1230..2375)
                     /locus_tag="VF991_09855"
                     /inference="COORDINATES: protein motif:HMM:NF015683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HEX9556788.1"
                     /translation="MRRETSTPRPGWQQKLEQLGFDYYVMDGKAYWTEQACYAFTADE
                     IDELEAATEALHGICLKAVEYVVANKLWQRMRIPPGWGDYIERVWRRADPTICGRFDL
                     AYGGKGPPKLLEYNADTPTALYEAAVVQWYWLKDVKPDADQFNSIHEKLIEAWRGILR
                     RLPPEALVHFARFEDQPEDLATSEYLRDTALQAGLAGKPIAVPQIGWNGRRFTDADEM
                     PIQVMSKLYPWEWMVREEFGVHVLTDTTAFIEPAWKMILSNKMLLPLLWEGFPAHPNL
                     LAAFEAEHPDLGGVYVKKPVFGREGHNVTIVGPGLFDTAGGDYGGEGYVWQAYQPLPV
                     FDGNHAVVGSWVIEGKPAGIGMREDERRITHNNSRFVPHYFEPGGSP"
     gene            complement(2379..2657)
                     /locus_tag="VF991_09860"
     CDS             complement(2379..2657)
                     /locus_tag="VF991_09860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556789.1"
                     /translation="MSMPSPNPSGGPRMSRAIKLVLMGVAGAALLYSCSPGIGALPFL
                     WFLPNPFFRGPAVSTPAPTPGQTTTTSAQSQRGGFGATGSQGGSSGTS"
     gene            complement(2660..3070)
                     /locus_tag="VF991_09865"
     CDS             complement(2660..3070)
                     /locus_tag="VF991_09865"
                     /inference="COORDINATES: protein motif:HMM:NF015927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HEX9556790.1"
                     /translation="MPELDWLVAVFPNFVRYVVVSFALAALFLWIYVLITPWREFALI
                     RAGNSAAATALVGALLGFCLPLANTIAHSVSLTDVVLWALVALAVQVIVHVGMRLMLP
                     DLKQAIEADRAAAGIAAGGFAVCFGLITAACLTT"
     gene            complement(3090..3857)
                     /locus_tag="VF991_09870"
     CDS             complement(3090..3857)
                     /locus_tag="VF991_09870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9556791.1"
                     /translation="MRGLSGKNVIVTGGGGAIGGAICRRFAGYGASVGVFDKNLDGAN
                     KVAGEIREDGGKAFVSGVDIADYDAVGNAILHFETEMGPTDVLVNNAGWDRFANFVDT
                     TPDLWDQLIAVNLRGPLNMSHFVLKGMVARGRGRIVNIASDAGRVGSSQEAVYSACKG
                     GIIAFTKTVAREVARRGITLNTVCPGPTDTPLLAAVAGADERGQKVRAALVGAIPMKR
                     VGQPEDIPGAVCFLASDDAAFITGQTLSVSGGLTMHG"
     gene            complement(3869..>4459)
                     /locus_tag="VF991_09875"
     CDS             complement(3869..>4459)
                     /locus_tag="VF991_09875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009755953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX9556792.1"
                     /translation="DLIEKNIKDYNALLRTWKEARDIVYNVVNCSKPIVSTMRGPAVG
                     AGLVAGILADVSIASKKARIIDGHTRLGVAAGDHAVIVWPLLCGMAKAKYYLLLCEAV
                     DGEEAERIGLVSLCVEDDQLEAKGLEVATKLAEGAQTSIRFTKYALNNWLRMMGPSFD
                     ASTALEMLGFLGPEVKEGLASHLEKRKPKFDPYSPL"
BASE COUNT          737 a         1421 c         1552 g          749 t
ORIGIN      
        1 ggcggcggct atagggaaga ggagagcgga ctggccaagc ttgccttcgc gtggatgctg
       61 cgcgaatccg agctgcacgg cctcatggtc gacgacgcgg ccaagcagcg cgaactcggc
      121 aatgccggcc cgggcaaggc ccggcccgat gccaatgcca ggatgcattc gtcgatgacg
      181 tggctgtggt gcctggcgga attcgtgccg atggtgtcgg gcttgcgcgg caagatccgc
      241 atcaatctgt ttcgtcggcg cttcgtgccg gcaggagcac tgatccacga atcggtgttt
      301 cgccacaccg gctacgatcg tccgctgccg cagcagcgcc gcatcgaaac ctagtcagcc
      361 cgccagcacc ggctcgccga cgatctgcgt gcggtgcatc aggcggcgca ggctttcgtc
      421 gaaggcgtcg cggcggtgca tgacgcagcg gttgtcccac agcacgaggt cgccggagcg
      481 ccacttctgg taccaggcga agcgctcctg cgtggcgtgc gcccacaccg cgttcaggag
      541 cttctcgctt tcctcgacag agagaccgtg gatataggcg ccggggcggc ggccgaggaa
      601 cagggtcttg cgcttagtca ccggatgcag gcggacgagg ggatgcacgg cacccggcgt
      661 gtgacgcgga tcgagggtgg tttgaaagcc cttgcgcagc tcgcccgccg agttgcggct
      721 ggaatcgtgg atgcaggtct tgccctcgat cacgcgcttc agttcgcccg gcagcgtctc
      781 ataggcggcg tacatgttca aaaatccggt gttgccgccg tcgggcggca cttccaaggc
      841 gtagagcagg gaggcgcgcg gtggcagcgg gttgtaggac atgtcggtgt gccagacgag
      901 ttcgtagctg ccgagcccgc ccaccggctt gccatccttg acgacgctgg agatcaccgc
      961 cacccattct tgggcgtcct tgaccagtcc ggaatcggtg cggtcgaagt tcgcggcggc
     1021 gaccggcacg cggtcgagct cgccgaagcg ggcgctgaac ttcatcagca tggggtcgtc
     1081 gagcttctgg ccggagaagc gcagcacgag atgttccgcc caggcctcgg cgatgcgggc
     1141 gaaggcggcg tcactcaagg gcttggacag atcgacaccg tgcacgtcgg cggcgagcgc
     1201 gccgccggtc ggctggatcc agagttcact catgggctgc ctcccggttc gaaataatgt
     1261 ggcacgaatc ggctgttgtt gtgagtgatg cggcgctcgt cctctcgcat gccgataccg
     1321 gccggcttgc cctcgatcac ccacgagccg accaccgcgt ggttgccgtc gaataccggc
     1381 agcggctgat aggcctgcca gacatagccc tcgccgccgt agtcgccgcc ggcggtatcg
     1441 aacaggcccg gcccgacgat ggtgacgttg tggccctcgc ggccgaatac tggcttcttc
     1501 acatagacgc cgcccaggtc ggggtgttcg gcctcgaagg cagccagcag gttgggatgg
     1561 gcggggaaac cctcccacag gagcggcagc agcatcttgt tgctgagaat catcttccag
     1621 gctggctcga tgaaagccgt ggtgtcggtg agcacatgga cgccgaactc ctcgcgcacc
     1681 atccattccc agggatagag cttgctcatc acctggatcg gcatttcgtc ggcatcggtg
     1741 aatcgccgtc cattccagcc gatctgcggc acggcgatcg gcttgccggc gaggccggcc
     1801 tgcagggcgg tgtcgcgcag atattccgac gtcgcgagat cctcgggctg gtcctcgaag
     1861 cgcgcgaaat gcaccagagc ctcgggcggc aggcggcgca ggatgccgcg ccatgcctcg
     1921 atcagcttct cgtggatgga gttgaactgg tcggcgtcgg gcttgacgtc cttcagccag
     1981 taccactgca cgacggccgc ttcgtagagc gcggtcggcg tgtcggcgtt gtactccaag
     2041 agcttgggcg ggcccttgcc gccataggca aggtcgaagc gcccgcagat cgttggatcg
     2101 gcgcgccgcc agacgcgttc gatatagtcg ccccagccgg gcgggatgcg catgcgttgc
     2161 cacagcttgt tggcgacgac gtactcgacg gctttgaggc atatgccatg cagcgcctcg
     2221 gtcgccgctt ccagctcatc gatctcgtcg gcggtgaagg cgtagcaggc ctgctcggtc
     2281 cagtaggcct tgccgtccat gacgtagtag tcgaagccca gttgctcgag cttttgctgc
     2341 cagcccgggc gaggcgttga ggtttcacgc cgcatggctc agctcgtgcc cgaagagccg
     2401 ccctgcgagc ccgtggcgcc gaagccgccg cgctggctct gggcggacgt cgtcgtcgtc
     2461 tggcccggcg tcggagcggg cgtcgaaacc gcagggccgc ggaagaaggg attgggcagg
     2521 aaccagagaa aaggcagcgc gccgatgccg ggactgcacg aatagagcaa ggccgccccg
     2581 gcaacgccca tcagcacgag cttgatggcg cgtgacatac gcgggccgcc cgatgggttg
     2641 ggagagggca tggacatggt caggtcgtga ggcaggcggc ggtgatgagg ccaaagcaaa
     2701 cggcaaagcc gccggctgcg atgcccgccg ccgcgcggtc agcttcgatt gcctgcttga
     2761 gatccggcag catcagccgc attcccacat gcacgatcac ctggacggcg agcgccacca
     2821 acgcccacag cacgacgtcg gtgaggctca cggaatgggc gatggtgttg gcgagcggca
     2881 ggcaaaaacc cagcagcgcg ccgaccagcg ccgtcgcggc tgccgagttg ccggcgcgga
     2941 tcaaggcgaa ctcgcgccac ggcgtgatca ggacatagat ccagaggaag agtgcggcga
     3001 gcgcgaagct cacgaccaca tagcgcacga agttcgggaa gaccgcgacc agccagtcga
     3061 gctcgggcat ggcccagagt ctccgccgct cagccgtgca tggtcaagcc gccggatacg
     3121 ctgagcgtct ggccggtgat gaaggcggcg tcgtcgctgg ccaggaagca gacggcgccc
     3181 gggatatcct cgggctggcc gacccgcttc atcgggatgg cgccgaccag cgcggcccgg
     3241 actttctggc cgcgctcgtc ggcgccggcg acggccgcca gcagcggcgt gtcggtcggg
     3301 ccggggcaga cggtattgag ggtgatgccg cggcgcgcca cttcgcgcgc caccgtcttg
     3361 gtgaaggcga tgatgccgcc cttgcaggcc gagtagaccg cttcctgcga ggagccgacc
     3421 cggccggcat ccgaggcgat gttgacgatg cggccccggc cgcgcgccac catgcccttc
     3481 agcacgaagt ggctcatgtt gagcggcccg cgcagattga cggcgatgag ctggtcccac
     3541 agatcgggcg tggtgtcgac gaagttggcg aagcggtccc aacccgcatt gttcaccaac
     3601 acgtcggtcg ggcccatctc ggtttcgaag tgcaggatgg cgttgccgac cgcgtcatag
     3661 tcggcgatgt cgacgcccga cacgaaggcc ttgccgccgt cctcccggat ctcgccggcg
     3721 accttgttgg cgccgtcgag gttcttgtcg aacacgccga cgctggcgcc atagcccgcg
     3781 aagcggcggc agatggcgcc gccgatcgcg ccgccgccac cggtgacgat gacgttcttg
     3841 cctgaaagtc cgcgcatggc gtgctccttc agaggggcga gtagggatcg aacttgggct
     3901 tgcgcttctc gagatgcgag gcgaggcctt ccttcacctc gggtccgagg aagcccagca
     3961 tctcgagcgc tgtcgaggca tcgaacgagg gacccatcat gcgcagccag ttgttgagcg
     4021 cgtacttggt gaagcggatc gaggtctgcg cgccttcggc gagcttggtg gcgacctcga
     4081 ggcccttggc ctcgagctgg tcgtcctcga cgcagagcga gaccaggccg atgcgctcgg
     4141 cctcttcgcc gtcgaccgct tcgcacagca gcagatagta cttggccttg gccatgccgc
     4201 agagcagcgg ccagacgatc accgcgtggt cgcccgcggc gacgccgagc cgcgtgtggc
     4261 cgtcgatgat gcgggccttc ttcgacgcga tcgacacgtc ggccaggatg cccgcgacca
     4321 ggcccgcgcc cacggcgggg ccgcgcatgg tgctgacgat cggcttggag cagttgacga
     4381 cgttgtagac aatgtcgcgc gcttccttcc aggtccgcag gagcgcgttg tagtccttta
     4441 tgtttttttc gatgagatc
//
LOCUS       DASWGA010000410         3916 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_427888, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000410 DASWGA010000000
VERSION     DASWGA010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3916
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427888"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(102..812)
                     /locus_tag="VF991_09880"
     CDS             complement(102..812)
                     /locus_tag="VF991_09880"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047689 - aspartate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HEX9556793.1"
                     /translation="MSRHIGIVACSAEGAALCYRTICVEAAVLLGRPHAHPEVSMHTP
                     SLADYMQHIDRNDWQGVADLMLASADKLAKIGADFLICPDNTIHQALPYVLARSPLPW
                     LHIAEVVAAEAVARGFRRIGITGTKWLVDSEVYPEKFLAQGLAYVRPSAAERDECSRI
                     IMDELVCSIFKPEAVAYYQQVIGRLKDQGCDAVVLGCTEIPLIINDENSALPTLDSTR
                     LLARAALKRAAHDKALAA"
     gene            928..2121
                     /locus_tag="VF991_09885"
     CDS             928..2121
                     /locus_tag="VF991_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556794.1"
                     /translation="MSITRRQVLSGSAVGAVSLASGLAAPAIAQNEPIRIGYLPALTG
                     PSSSTGIGINRGTLLAVDEINAAGGINGRKIELIVRDTQSDPTKAVNAVAELTQRQKV
                     SIIWGPLNSGEALAATPLIARDKVPMLHPCWVDELIDVKKYPMSFRIAPTNTQVGAGA
                     NYYVVDVLKLKKVAVISDTTGYGTASVNTYVPMLKAKGAEVVYTNHVDAANPDLKPEL
                     LRMQSAGAQAIMPWSVNAGFLSRILNTRGAMGWDVPVVGQTTLGSGQTKALLEKPENW
                     NKVYSNNFRQVCYAGGKLPARAQEFVDRLKKAKIEMGDTLLWWIALGWDGAQMMGQTL
                     KAAGPKADDIVAHWNKTNGWPGVYGTVTWTPEQHNGFPDSEVVMCEVNSLKDGAFNLA
                     PGYSA"
     gene            2242..3099
                     /locus_tag="VF991_09890"
     CDS             2242..3099
                     /locus_tag="VF991_09890"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556795.1"
                     /translation="MLESILSYGLAVGAVYALIGITYNVMFSASRVFSFTAGMLGMLG
                     GVLGALFIVKMGMPAIVGFVLVLACGAVLGLVTEVLTVRPVLKSIEQHLYVLSTLAFA
                     LMVQQLTAVEWGTEAQPFPRLIPIGPGWLDQQFWLPMLACAVTIVGLELLYRKTLIGR
                     AFLACAEDSYAARALGLPETQLRMASFALAGVIGTLAGFTGAEMLLAFFGNQSILNFY
                     GFVPVALGGMGSNRGAVVGGLALGLFQQAANFLVGGIFAAVAVFVVFIIVLLLRPEGL
                     AGSSAARRV"
     gene            3096..>3916
                     /locus_tag="VF991_09895"
     CDS             3096..>3916
                     /locus_tag="VF991_09895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9556796.1"
                     /translation="MTDTAAPAQPARALSLARIEGALPWIALGLVGLLLPLLDDSYIG
                     VIAQRAYIYWILSAGLNLVVGYAGQIAIGWVSMLTLGAYTTAALTAGTATPAWHPYLA
                     LVAGGAVGALAGVIVGLPALRLRTFYFAMTTLGFATIVTQVALAWKDVTGGGVGTPGP
                     VFPWPFDPGWGFYYFCFILAALATWMTANLASSRFGRALVAIRDAEVAAEASGVAKPR
                     LLVAVFLFAGALGGVAGGLFASLQSYITPDAFTFEMSVLFFIAILIGGRGSILGPA"
BASE COUNT          607 a         1312 c         1289 g          708 t
ORIGIN      
        1 tcgacgacgc cgtcgcggcg gggttgcagc cttcttagcg gagcgcggac ctccaggtcc
       61 gcatcatgag atgagcggac ctggaggtcc gcgctccaag attaagctgc tagcgccttg
      121 tcgtgcgccg cgcgcttgag cgccgcccgc gccagcaggc gcgtcgaatc gagggtcggc
      181 agggccgagt tctcgtcgtt gatgatcaac ggaatctcgg tgcagcccag cacgacggcg
      241 tcgcagccct gatccttcag gcgcccgatc acctgctggt agtaggcgac cgcctcgggc
      301 ttgaagatgc tgcagaccag ctcgtccatg atgatgcggc tgcattcgtc gcgctcggcc
      361 gcgctcgggc gcacataggc gagtccctgc gccaaaaact tctccggata gacctcgctg
      421 tcgaccagcc acttcgttcc ggtgatgccg atgcggcgaa agccgcgcgc caccgcctcg
      481 gctgcgacca cctcggcgat gtgcagccac ggcaggggcg agcgcgccag cacgtagggc
      541 agcgcctggt ggatggtgtt gtcgggacag atcaggaaat cggcgccgat cttcgccagc
      601 ttgtccgccg aggcgagcat caggtcggcc acgccctgcc agtcgttgcg atcgatgtgt
      661 tgcatgtagt cggcaagcga cggcgtatgc atggagactt cgggatgggc atgcggacgg
      721 ccgagcaaca cggcagcttc gacgcaaatc gtccgatagc agagcgcggc accttccgca
      781 gagcaggcga ctattccgat atgccgggac atggcgaagt ctacaaagat gcggctggtg
      841 tcacaacggc ggccgcatcg cggctttgat cgcgtggcgg cgcgcgctat gctggctgca
      901 taaataagcg ctgtgggagg aaatgacatg tcgattacgc gccgccaagt gttgtccgga
      961 tctgccgtcg gtgccgtgtc gctggcatcg ggccttgccg ctccggcgat cgcccagaac
     1021 gagccgatcc gcatcggcta cctgccggcc ctgaccggac ccagttcctc gaccggcatc
     1081 ggcatcaatc gtggcacctt gctcgcggtc gacgagatca acgcggcggg cggcatcaat
     1141 ggccgcaaga tcgagctgat cgtccgcgac acccagagcg atccgaccaa ggcggtgaac
     1201 gccgtggccg agctgacgca gcgccagaag gtcagcatca tctggggccc gctcaactcc
     1261 ggcgaagcac tggcggcgac gccgctgatc gcgcgcgaca aggtgcccat gctccatccg
     1321 tgctgggtcg acgagctgat cgacgtcaag aaatacccga tgtccttccg catcgcgccg
     1381 accaacacgc aggtcggcgc cggcgccaac tactacgtgg tcgacgtgct caagctgaag
     1441 aaggtggcgg tgatcagcga caccaccggc tacggcacgg cctcggtcaa cacctacgtg
     1501 ccgatgctca aggccaaggg tgccgaggtg gtctacacaa accatgtcga cgcggcgaac
     1561 cccgacctca agcccgagct gctgcgcatg cagagcgcag gggcgcaggc gatcatgccg
     1621 tggagcgtca acgccggctt cctgtcgcgc attctcaata cccgcggcgc tatgggctgg
     1681 gacgtgccgg tggtcggcca gaccaccctg ggttccggac agaccaaggc gctgctcgag
     1741 aagcccgaga actggaacaa ggtctactcg aacaacttcc gccaggtctg ctacgccggt
     1801 ggcaagctgc cggcgcgcgc ccaggaattc gtcgaccgcc tgaagaaggc caagatcgag
     1861 atgggcgaca cgctgttgtg gtggatcgcg ctcggctggg acggcgccca gatgatgggc
     1921 cagacgctca aggccgccgg gccgaaggcc gacgacatcg tcgcccactg gaacaagacc
     1981 aacggctggc cgggcgtcta cggcaccgtc acctggacgc cggagcagca caacggcttc
     2041 cccgacagcg aggtcgtgat gtgcgaggtc aactcgctca aggacggcgc cttcaacctg
     2101 gctccgggct acagcgcgta gctcccgtgt catcctgagc gcagcgaagg atctcatggc
     2161 attccaacga gcacgccgct tgcaatcgcc atgagatcct tcgcttcgct caggatgaca
     2221 gagatgcccg gggtctagcc ggtgctcgag tccatcctct cctacggcct tgcggtagga
     2281 gcggtctacg cactgatcgg catcacgtac aacgtgatgt tctcggcatc gcgcgtgttc
     2341 agcttcaccg cgggcatgct gggaatgctg ggcggtgtgc tgggcgcgct cttcatcgtc
     2401 aagatgggca tgccggcgat cgtgggcttc gtgctcgtgc tcgcctgcgg tgccgtgctt
     2461 ggcctggtca ccgaggtgct gacggtgcgg ccggtgctga aaagcatcga gcagcacctc
     2521 tacgtgctgt cgacgctcgc cttcgccctg atggtccagc agctcaccgc cgtcgaatgg
     2581 ggcaccgagg cccagccctt cccgcggctg atcccgatcg ggccgggctg gctcgaccag
     2641 caattctggc tgccgatgct ggcctgcgcc gtcaccatcg tcgggctcga gctgctctac
     2701 cgcaagaccc tgatcggccg cgccttcctg gcgtgtgccg aggacagcta cgccgcccgc
     2761 gcgctcggcc tgcccgagac gcagctcagg atggcgagct ttgcgctggc cggcgtgatc
     2821 ggcacgctgg cgggcttcac cggcgctgag atgctgctgg ccttcttcgg caaccagtcg
     2881 atcctgaatt tctacggctt cgtgccggtc gccttgggcg gcatgggttc caaccgcggc
     2941 gccgtggtcg gcggcctggc tctgggcctc ttccagcagg ccgccaactt cctcgtcggc
     3001 ggcatcttcg ctgcggtcgc ggtattcgtg gtcttcatca tcgtcctgct gctgaggccc
     3061 gaaggtctgg ccggctcatc ggcggcgcgg cgcgtatgac ggacaccgcc gcccctgcgc
     3121 agccggcgcg cgcgctcagc ctcgcccgga tcgagggcgc cttgccctgg atcgcgctcg
     3181 gcctggtcgg ccttcttctg ccgctgcttg acgattccta catcggcgtc atcgcccagc
     3241 gcgcctacat ctactggatc ctgtcggctg gcttgaatct cgtggtcggt tatgccggcc
     3301 agatcgccat cggctgggtg tcgatgctga ccttgggcgc ctacaccacc gctgctctga
     3361 cggcaggcac ggcgacgccg gcctggcatc cttatctggc gttggtcgcg ggcggcgcgg
     3421 tcggcgcgct ggccggcgtc atcgtcggac ttcccgcgct gcgactgcgt accttctatt
     3481 tcgccatgac gacgctgggc ttcgccacca tcgtcactca ggtggcgctc gcctggaagg
     3541 acgttaccgg cggtggcgtc ggtacgcccg ggccggtttt tccctggccc ttcgatcccg
     3601 gctggggctt ctactatttc tgcttcatcc tggccgcact ggcgacctgg atgacggcca
     3661 acctcgcatc gagccgcttc gggcgcgcgc tggtcgccat ccgcgacgcc gaggtcgcag
     3721 ccgaagcgtc aggcgtcgcc aagcccagac tcctggtcgc ggtgttcctg ttcgccggtg
     3781 ccctgggcgg tgtggcgggc gggctgttcg cctcgctgca gtcctacatc acgcccgacg
     3841 cctttacctt cgagatgtcg gtgctgttct tcatcgccat cctgatcggc gggcgtggct
     3901 cgattctggg gccggc
//
LOCUS       DASWGA010000411         1702 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1188251, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000411 DASWGA010000000
VERSION     DASWGA010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1188251"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1303
                     /locus_tag="VF991_09900"
     CDS             <1..1303
                     /locus_tag="VF991_09900"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEX9556797.1"
                     /translation="VICEIETDKATMEVEAVDEGTVAQILVPEGSEGVKVNAPICILA
                     AEGESVADAAKSAPAAKPAPAQPAAAKADVPSTEGKPKQELPAKPAAPPPSPPPAAEP
                     EWKGKTVHMTVREALRDAMAEEMRKDGQVFLMGEEVAQYQGAYKVSQGLLEEFGAKRV
                     IDTPITEHGFAGLGVGAAFGGLKPIVEFMTFNFAMQAMDQIINSAAKTHYMSGGQMTC
                     PIVFRGPNGAAARVAAQHSQCYASWYAHVPGLRVLAPWSAADAKGLLKAAIRDPNPVI
                     FLENEILYGQSFDVPDDPDFVLPIGKARIERPGKDVTIAAFSIMVGKALQAAEELAKQ
                     GIDAEVINLRSLRPFDTETIVNSIKKTNRLVSVEEGWPFAGIGSELAAQMMEQAFDWL
                     DAPIKRVHGLDVPLPYAANLERLALPQPENIVEAARAVCNR"
     gene            1318..>1702
                     /locus_tag="VF991_09905"
     CDS             1318..>1702
                     /locus_tag="VF991_09905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008546579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX9556798.1"
                     /translation="MSINILMPALSPTMTEGKLAKWHVKVGDTVKAGQVVCEIETDKA
                     TMEVEAVDEGKIGQIVVPEGAEGVKVNAVIAILLEEGETSLPAGAAPAPTPAPKSAPA
                     AAAPAPKPASPPPAAPAAAPKPAQAP"
BASE COUNT          313 a          569 c          587 g          233 t
ORIGIN      
        1 agtgatctgc gagattgaga ccgacaaggc gaccatggag gtcgaggcgg tcgacgaagg
       61 caccgtcgcg cagatcctgg tgccggaagg cagcgaaggc gtgaaggtga acgcgccgat
      121 ctgcatcctg gccgccgaag gcgagagcgt ggccgatgcc gccaagtcag cgcccgcggc
      181 caagcccgct ccggcgcagc cggcggccgc caaagccgac gttcccagca ccgagggcaa
      241 gcccaagcaa gaattgccgg ccaagccggc ggcccctccg ccatcgccgc cgcccgccgc
      301 cgagcctgaa tggaagggca agacggtgca tatgacggtg cgcgaggcgc tgcgcgacgc
      361 catggccgag gagatgcgca aggacggcca ggtcttcctg atgggcgagg aggtcgcgca
      421 ataccaaggc gcctacaagg tgagccaggg cctgctcgag gagttcggcg ccaagcgcgt
      481 gatcgacacg ccgatcaccg agcatggctt cgccggcctg ggcgtcggcg cagcgttcgg
      541 cgggctgaag ccgatcgtcg aattcatgac cttcaacttc gccatgcagg cgatggacca
      601 gatcatcaac tcggcggcca agacgcatta catgtcgggc ggccagatga cttgcccgat
      661 cgtgttccgc ggccccaatg gcgcggccgc ccgcgtcgcc gcccagcatt cgcaatgcta
      721 tgcgagctgg tacgcccacg tgcccggcct ccgggtcctg gcgccgtgga gtgccgccga
      781 tgccaagggg ctgctcaagg cggcgatccg cgaccccaac ccggtgatct tcctcgagaa
      841 cgagatcctt tacggccagt cgttcgacgt gcctgacgat cctgacttcg tgctgccgat
      901 cggcaaggcc aggatcgagc ggccgggcaa ggatgtcacc atcgccgcct tctcgatcat
      961 ggtcggcaag gcgctgcaag ccgccgagga gctcgccaag cagggcatcg acgcggaggt
     1021 catcaatctc aggagcctgc gcccgttcga caccgagacg atcgtcaatt cgatcaagaa
     1081 gaccaatcgg ctggtctcgg tcgaggaggg ctggccgttc gctggcatcg gctcggagct
     1141 ggcggcccag atgatggagc aggcgttcga ctggctcgac gcgccgatca agcgcgtcca
     1201 tggactcgac gtgccgctgc cttatgccgc caacctggag cgcctggccc tgccgcagcc
     1261 ggagaacatc gtcgaggccg cccgcgcggt ctgcaatcgc tgacgctgga acgggccatg
     1321 tcgatcaaca tcctgatgcc ggcgctgtcg ccgaccatga ccgagggcaa gcttgcgaag
     1381 tggcacgtca aggtgggcga tacggtcaag gcgggccagg tggtctgcga gatcgagacc
     1441 gacaaggcga ccatggaggt cgaggcggtc gatgagggca agatcggcca gatcgtcgtg
     1501 ccggaaggcg ccgagggcgt gaaggtgaat gccgtcatcg ccatcctgct cgaggagggc
     1561 gagacctctc tgccggccgg cgccgcgccg gcaccgacac cggcgccaaa atccgcacct
     1621 gcggcggcgg cgccggctcc gaagcccgca tcgcctccgc ccgccgcgcc ggcagccgcg
     1681 ccaaagcctg cgcaggcgcc aa
//
LOCUS       DASWGA010000412         2478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1312366, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000412 DASWGA010000000
VERSION     DASWGA010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1312366"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VF991_09910"
     CDS             <1..430
                     /locus_tag="VF991_09910"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEX9556799.1"
                     /translation="CGRWMARAGAELLAEADLVAPVPLHWRRLFTRRYNQAQLLARVV
                     VHQSAAKSPARLAPELLRRRRWTGSQTGLRAQERRGNVRQAFDIHPRWVSEVAGKTVL
                     LVDDVLTTGATVEACARVLQRGGARHVDVLTLARVVRPAV"
     gene            450..710
                     /gene="grxC"
                     /locus_tag="VF991_09915"
     CDS             450..710
                     /gene="grxC"
                     /locus_tag="VF991_09915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020012079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEX9556800.1"
                     /translation="MAKVEIYTTPFCGYCARAKSLLDKKGAAYEEMDVMMDEKKRAEM
                     RDRAKRSTVPQIFINGQYIGGSDELSELEQTGKLDSLLAQPG"
     gene            723..1592
                     /locus_tag="VF991_09920"
     CDS             723..1592
                     /locus_tag="VF991_09920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEX9556801.1"
                     /translation="MPTTFKAGLIQTNVSNDMAENEAFVREQARLARDAGADFVMTPE
                     NTGLIGASRAETLEKAQTEESHAMLAACRASACETGAWFLLGSIHVRVPGEEQIRNRS
                     YLIDPSGAVVASYDKIHMFDVQLAGGESYRESSTFKPGEKSVLAETPWGVLGMTICYD
                     LRFPYLYRDLAHAGATMLTIPSSFTVPTGQAHWHALMRARAIETGCFVFAPAQVGTHK
                     GSNRKTYGHSIAVAPWGEVLADAGGEKAGFVVAEVDLGKVAEARRMVPSLTHDRKYAA
                     PVLHKAAVAKAAE"
     gene            complement(1656..2150)
                     /locus_tag="VF991_09925"
     CDS             complement(1656..2150)
                     /locus_tag="VF991_09925"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9556802.1"
                     /translation="MQWAGLIGSGATVLDVAAGGGRHSRFLANLGLKVTALDRDISAL
                     AGHPDVEAIEADLENGSPWPLPGRTFGAVVVTNYLHRPLFPALLDALAPGGILLYETF
                     MEGNERFGRPSRPEFLLKDGELLEWVRGRLSVTAYEARMISEPRMAMVQRIAARRLLS
                     SRAG"
     gene            2254..>2478
                     /locus_tag="VF991_09930"
     CDS             2254..>2478
                     /locus_tag="VF991_09930"
                     /inference="COORDINATES: protein motif:HMM:NF018391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HEX9556803.1"
                     /translation="MILYRLRCSEGHEFESWFKDSKSYERQEKKSLVGCPVCGGAKIE
                     RAPMAPRLGKGGQKKDADAPPAVAPAPAPSP"
BASE COUNT          442 a          846 c          824 g          366 t
ORIGIN      
        1 ctgcgggcgc tggatggcgc gcgccggcgc cgaacttttg gcggaagccg acctggtcgc
       61 ccccgtgcca ctgcattggc ggcggctgtt cacgcgccgc tacaatcagg cgcagctcct
      121 ggcccgcgtc gtcgtccacc aatcggccgc gaaatctcca gctcggctcg cccctgaact
      181 gctgcgccgg cggcggtgga ccggctcgca gaccggcctg cgcgcccagg aacggcgcgg
      241 caatgtccgg caggccttcg atatccatcc gcgctgggtg tcggaggtgg cgggcaagac
      301 cgtgctgctg gtcgacgacg tgctcaccac cggcgccacc gtcgaagcct gcgcacgggt
      361 tttgcagcgc ggcggggcgc ggcacgttga cgtgctgacg ctggcgcggg tcgtccgccc
      421 ggcggtataa tccgccaaag aggttcacga tggccaaggt cgagatctac accacgccgt
      481 tctgcggcta ctgcgcgcgg gccaaaagcc tgctcgacaa gaaaggcgcg gcgtacgagg
      541 aaatggacgt gatgatggac gagaagaagc gggccgaaat gcgcgaccgt gccaagcgct
      601 cgacggtgcc gcagatcttc atcaacggcc agtatatcgg cggctccgac gagctttcgg
      661 agctcgagca gacgggcaag ctcgattcgc tgctcgccca gccgggctaa cgggcgggcg
      721 ccatgccgac cacgttcaaa gccggcctga tccagaccaa tgtcagcaac gacatggccg
      781 agaacgaggc cttcgtgcgc gagcaggcgc ggcttgcccg cgacgccggc gccgacttcg
      841 tcatgacgcc ggagaatacc ggcttgatcg gcgccagccg cgccgaaacc ctggaaaagg
      901 cgcagacgga agagagccac gccatgctgg ccgcctgtcg cgccagcgca tgcgagaccg
      961 gcgcctggtt cctgctgggg tcgatccatg tccgcgtgcc gggcgaagag cagatccgca
     1021 accggtccta cctgatcgat ccctccggcg ccgtcgtggc aagctacgac aagatccaca
     1081 tgttcgacgt gcaactcgcc ggcggcgaga gctatcgcga atcgtcgacc ttcaagccgg
     1141 gcgagaaatc ggtgctggcg gaaacgccgt ggggcgttct cggcatgacg atctgctacg
     1201 atctgcgctt cccttatctc taccgcgacc tggcgcatgc cggcgccacc atgctgacga
     1261 tcccttcgtc cttcacggtg ccgaccgggc aggcgcactg gcatgccctg atgcgcgccc
     1321 gcgccatcga gaccggctgc ttcgtcttcg cgccggccca ggtcggcacg cacaagggat
     1381 ccaaccgcaa gacctacggc cattcgatcg ccgtcgcgcc gtggggcgag gtgctggccg
     1441 acgccggtgg agagaaggca ggcttcgttg tcgccgaggt cgacctcggc aaggtcgccg
     1501 aagcgcgcag gatggtgccg tcgctgacgc acgaccggaa atatgccgcg ccggtgctgc
     1561 acaaggcagc ggtcgccaag gcagcggaat gacagcgaag ctgtcatcct gaggccgcag
     1621 gccgaaggat ccttcgcttc gcttcagcgc gggggttacc ccgcgcgcga tgacaaaagc
     1681 cgccgcgccg cgattcgctg caccatcgcc atcctcggtt cgctgatcat ccgtgcttca
     1741 taggccgtca ccgaaaggcg gccgcggacc cattcgagca gctcgccgtc cttcagcagg
     1801 aactcgggcc ggctgggccg gccgaaacgc tcgttgccct ccatgaacgt ctcgtaaaga
     1861 aggatgccac cgggcgcgag cgcgtcgagc aacgcaggga agagcggccg gtggagataa
     1921 ttggtcacga ccacggcgcc gaaggtgcgg ccgggcaggg gccagggcga accattctcg
     1981 agatcggcct cgatggcctc gacgtcggga tgcccggcca gggcactgat atcgcggtcc
     2041 aaggccgtta ccttgaggcc gaggttggcc aggaaccggc tgtgtcgccc gccgccggcg
     2101 gccacatcga ggaccgtggc gccgctcccg atcaggcccg cccattgcac gatccagggc
     2161 gaaggcacgc cccttgcgtc aggcacaatc gcaccccatc atctctggca ctcccccgca
     2221 gggagtgcca acagcggaat tgctcgtaat ttcatgatcc tataccgact gcgctgctcc
     2281 gaaggccatg aattcgaaag ctggttcaag gacagcaaga gctacgaacg ccaggaaaag
     2341 aaatccctgg tcggctgccc cgtctgcggc ggcgccaaga tcgagcgcgc cccgatggcg
     2401 ccgcggcttg gcaagggcgg ccagaagaag gacgccgacg caccgcctgc cgtcgcgccg
     2461 gcgcctgccc cgtcccct
//
LOCUS       DASWGA010000413         3550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_555676, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000413 DASWGA010000000
VERSION     DASWGA010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3550
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_555676"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VF991_09935"
     CDS             <1..207
                     /locus_tag="VF991_09935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556804.1"
                     /translation="LVMIPSGDRIVPPLSAAALAEPGRGLKNVTRLDLPLGHIGMVVS
                     GRARDLCWTPLIEWLGALPPKGCR"
     gene            204..1046
                     /locus_tag="VF991_09940"
     CDS             204..1046
                     /locus_tag="VF991_09940"
                     /inference="COORDINATES: protein motif:HMM:NF016296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HEX9556805.1"
                     /translation="MTAQDRSFDWRVPAIWTVLLGISLFAHAYVEVANEASRGNSITF
                     GRALVIEAASHLVIGALLPVLYWLHRRWPVNGPPRNLLIHVLALVPFSIAHTLGMAAL
                     RLLWFVGIAGERYAFPLTIDRLSYEFAKDIVNYALLSAAVLALRHLLARVPASVAAPV
                     PSPSPTVGSLTDRFAVRKRGKEIMVEVADIDWVEAAGNYAVLHVGGETLEIRSSLSKL
                     EGELDPKRFVRVHKSYVVNIARIAEVTPWISGDWRIRLQDGAEVNLSRRYRQRFETLV
                     PVKS"
     gene            1267..2196
                     /locus_tag="VF991_09945"
                     /pseudo
     CDS             1267..2196
                     /locus_tag="VF991_09945"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
     gene            complement(2253..2804)
                     /locus_tag="VF991_09950"
     CDS             complement(2253..2804)
                     /locus_tag="VF991_09950"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9556806.1"
                     /translation="MNRYHIVTERLDLRPITWADADRLAVLHADARMMSLLKHGPLSR
                     ADSDALVADYEAEWRALGFGSWTASERASRRLVGLGGLRIHEGDYGVALRGAFTPDSQ
                     GKGYGSELGRAALAFAFDVVGLDRVVAITRPDNTAGQRSLEKFGMRRDREIKRADGRT
                     LLLYVAFNPKSGRMNHNGRTTQM"
     gene            2875..>3550
                     /locus_tag="VF991_09955"
     CDS             2875..>3550
                     /locus_tag="VF991_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEX9556807.1"
                     /translation="MATDIVIASAARTPIGSFNGAFGAVPAHDLGKAAIKGALERAKV
                     KPEEVDEVILGQILSAAQGQNPARQAAVNSGIPVEKTALGINQLCGSGLRAVAFGWQA
                     IRNGDASIMVVGGQESMSQAPHAAYMREGTKMGELKMTDTMLKDGLWDAFHGYHMGQT
                     AENIAARWQITREDQDRFAVASQNKAEAAQTSGRFDAEIAPVTIKGRKGDVVVDKDEY
                     IRHGATY"
BASE COUNT          533 a         1211 c         1145 g          661 t
ORIGIN      
        1 ctggtcatga tcccgtcggg cgatcgcatc gtgccgcctt tgtcggccgc cgcgctcgcc
       61 gagcccggac gcggcctcaa gaacgtcacg cgcctcgacc tgccgctcgg ccatatcggc
      121 atggtggtga gcggccgtgc ccgcgatctc tgttggacgc cgctcatcga gtggctgggc
      181 gctcttcctc ccaaggggtg tcgatgacgg cgcaggacag gtctttcgat tggcgcgtgc
      241 cggcgatctg gacagtgctg ctcggaattt cgttgttcgc gcatgcctat gtcgaagttg
      301 ccaacgaggc gagccgcggc aactccatca cgttcgggcg cgccctggtc atcgaggccg
      361 cgagccatct tgtcatcggc gcattgctgc ccgttcttta ttggctgcat cgtcgctggc
      421 cggtcaacgg accgccgcgc aacctgctga tccacgtgct ggccctcgtg ccattcagca
      481 tcgcccatac tttggggatg gcggcacttc ggctgctgtg gttcgtcggc attgccggcg
      541 agcgatatgc ctttccgctc accatcgatc ggctgagcta cgagtttgcc aaggatatcg
      601 ttaactacgc cttactgagt gccgctgtcc tggcgttgcg ccatctgctc gcgcgcgtgc
      661 ccgcatccgt ggcggcgcct gtgccgtcgc catcgccaac cgtcggttcg ctgaccgatc
      721 gcttcgcggt tcgcaagcgc ggcaaggaga tcatggtcga ggtggccgac atcgactggg
      781 tcgaggcggc gggcaactac gccgttcttc atgtcggcgg cgagacgctg gaaatccgct
      841 cgtcgctcag caagctggaa ggcgagctcg atcccaagcg tttcgtgaga gtccacaagt
      901 cctacgtggt gaacatcgcc cggatcgccg aggtgacacc gtggatcagc ggcgactggc
      961 gcatccgctt gcaggacggc gccgaggtga acctcagccg gcgctaccgc cagcgcttcg
     1021 agaccttggt gccggtcaag agctgaccgg tggtcccggc accgtcgccg gtcgtcccaa
     1081 cgcgctcgcc ggtcgtcaca attcgacgct cgatcaaagg gttggtggct aagaggagga
     1141 cgttcgcaac gtccatcccg aggtgccgtc gtgcccaacc ttccggttcc cgctcccttc
     1201 cgccgcaccg atctcgattg gctgcgcgtg tcggctttcg gcctgctgat cctctaccac
     1261 gccggcatgg cctggtcggg ctggagctgg catctcacca gcaccgacag catcgactgg
     1321 ctgcgcgagg gcatgcggtt cgtgaaccgc tggcgcatgc cgctgatctt cgtggtgtcc
     1381 ggcgccgcca tcatgctcgc cttgggcacg cgctcgcccg gcgcctttgc cctcgaccgg
     1441 gtgcgccgcc tgctgttgcc gctggcgttt ggcatggcgg tcgtggtgcc gccgcaggtc
     1501 tatctcgagc gcctgtacag cggccagttc agcggctcgt tcctggaatg gctgccgcag
     1561 gcctttgtcg gcgtctatcc ggcaggcaat atgagctggc accatctctg gttcctggcc
     1621 tacgtgctgg tgctcacctt cgtgctattg ccgtgtttgc tgtgggcgcg cagcacacag
     1681 ggccgcgccg cccatgcgcg agccgggcat cttattgcgc gcaccggcct gcagtggttg
     1741 atgccgctgc cgcttgctgc tgccatgctc tggctggcgc cgatctccca caacaccaat
     1801 ggcctgatcg gcgactggta tgggctggcc tattacgggg tcctgctgct ctacggcgcg
     1861 tttctcttcg gatcgccagc ggcgttggcc gcgctcaacc gccagcgttt tctgtcgctc
     1921 accatcggca tcgcggctta tgcccttttc tacgtcgtct tcgtcgacgg cgccgtccgt
     1981 ccggtcattc ggccggaaga ccggccggcc tatgcgctgc tgtcggcggt caacacgatg
     2041 gcctggctgt tcgcgatcct gggctttgcc aaccgatacc tgacgcggcg gccggcgttc
     2101 ctcgcggaag ccagcgaagc cgtctaccca ttctacatgc tgcatcagac ggtgacggtg
     2161 attgcggtct actggttgct cgaaatcggc gtcccgccgg tcgccggatt catcctggcc
     2221 gcgctggcga cgttcctcgg cacgaccgcg atctacatct gcgtcgtgcg cccgttgtgg
     2281 ttcatccggc cgcttttcgg attgaaggcg acatacagca gcagcgtccg gccgtccgcg
     2341 cgcttgatct cgcggtcgcg gcgcatgccg aatttttcca gcgagcgctg acccgctgta
     2401 ttgtccggcc gggtgatcgc caccacgcga tcgaggccca cgacatcgaa ggcaaaggca
     2461 agggcggcgc ggccgagttc cgacccgtag cccttgccct gcgagtcggg cgtgaaggcg
     2521 ccgcgcagcg ccacgccgta gtcgccctca tggatgcgca ggccacctag gccgaccagc
     2581 cgtcggctcg cgcgctcact cgccgtccag ctgccgaagc ccaaggcccg ccattcggcc
     2641 tcgtagtccg ccaccagggc atcgctgtcg gcgcgcgaca gggggccgtg cttcagaaga
     2701 ctcatcatcc gcgcatcggc atgcagaacg gcgagccggt cggcgtcggc ccaggtgatc
     2761 ggccgcaggt cgagtcgctc ggtgacgata tggtaacggt tcaagacgag tccttgccgg
     2821 tgccgccggc caacctatag agtcgaccgc agggcggccc gcaaggagga tcacatggca
     2881 accgacatcg tcatcgcgag cgcagcgcgc acgcccatcg gctcgttcaa tggcgcgttc
     2941 ggcgccgtcc cggcccacga cctcggcaag gccgcgatca agggtgcgct cgagcgcgcc
     3001 aaggtgaagc ccgaggaagt cgacgaagtg atcctgggcc agatcctgtc cgccgcgcag
     3061 ggccagaacc cggcccgtca ggccgcggtc aattccggca ttccggtcga gaagacagcg
     3121 cttggcatca accagctctg cggctccggc ctgcgcgccg tcgccttcgg ctggcaggcg
     3181 atccgcaacg gcgatgcctc gatcatggtg gtcggcggcc aggagagcat gagccaggcg
     3241 ccgcacgccg cgtacatgcg cgaaggcacc aagatgggcg agctcaagat gaccgacacc
     3301 atgctcaagg acggtctgtg ggacgccttc cacggctatc atatgggcca gaccgccgag
     3361 aacatcgccg cgcgctggca gatcacccgc gaagaccagg accgtttcgc cgtcgcctcc
     3421 cagaacaagg ccgaggcggc gcagacctcc ggccgtttcg acgccgaaat cgcgccggtg
     3481 acaatcaagg ggcgcaaggg cgacgtcgtg gtcgacaagg acgaatacat ccgccacggc
     3541 gccacctacg
//
LOCUS       DASWGA010000414         1851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1568822, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000414 DASWGA010000000
VERSION     DASWGA010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568822"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1851)
                     /locus_tag="VF991_09960"
     CDS             complement(<1..>1851)
                     /locus_tag="VF991_09960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HEX9556808.1"
                     /translation="AAAPGQGSFTVTLSAASMTPVTVHYATADGTATAGSDYVAQAGS
                     LTFAAGETQKTIQVAAIGDATVEPNEGFSVVLTGPVGATIAHGTAAGAIINDDVAPPP
                     ALPTLSISDTSVVEGNPGSGATAGWFSTSGNQIVDSAGHSVQIAGVNWFGFESTTMAP
                     HGLWTRGYKDMMDQMVSLGFNTIRLPFSSEMLHTAAAPNGIDFSKNPDLQGLSAVQVM
                     DKIVDYAGQVGLKIILDHHRSEAGAGTSDNGLWYDAQHSQAEWISDWQMLAARYAHNP
                     TVIGADLHNEPYNGTWGDGGPNDWMAAAEHAGNAIGAANPNWLIFVEGIGTYQGQSYW
                     WGGNLMGVKDHPVELDVANKLVYSAHDYPHSVFPQTWFDSPDFPANLPAKFDQMWGYI
                     YKQEIAPVYIGEFGTKLTDPKDAPWLKAITAYLGGDFNNDGTSDIPAGKQGISWTFWS
                     WNPNSGDTGGILADDWTSVNQAKLAYLKPIEFDLGDGAGGTGPAATFVLTLSKPATET
                     VTVDFHTVAGDATSADFTGSSGSVTFAPGEQSKTISIAITPDQLSEANEHFTVVLTNA
                     TGATITRATATATIVDDDAPPVTPPPTPSPGLQAQFSVVDSWSNGFNADV"
BASE COUNT          284 a          576 c          642 g          349 t
ORIGIN      
        1 cgacgtcggc gttgaagccg ttgctccagg aatcgacgac ggagaactgc gcctgcaggc
       61 caggcgaagg ggtgggcggt ggcgtcaccg gtggcgcatc gtcgtcgacg attgtcgccg
      121 tggcggtggc gcgcgtgatg gtggcgcccg tggcattggt cagcaccacg gtgaaatgct
      181 cgttggcttc gctgagctga tcgggcgtga tggcaatcga gatcgtcttg ctctgctcgc
      241 ccggggcgaa ggtgaccgaa ccgctgctgc cggtgaagtc cgcactcgta gcgtcgcccg
      301 cgacggtgtg gaagtcgacg gtcacggtct cggtcgcggg cttggacagc gtgagcacga
      361 acgtcgctgc aggcccggtc ccgccggctc catcgcccaa gtcgaactcg atcggcttca
      421 gataggcgag cttcgcctgg ttcacgctgg tccagtcgtc ggccaggatg ccgccggtat
      481 cgccggaatt gggattccac gaccagaagg tccagctgat gccctgcttg ccggcgggaa
      541 tgtccgacgt gccgtcgttg ttgaaatcgc cgccgagata ggcggtgatc gccttcagcc
      601 acggcgcatc cttggggtcg gtgagcttgg tgccgaactc gccgatatag accggggcaa
      661 tttcctgctt gtagatgtaa ccccacatct gatcgaactt ggccggcagg ttcgccggga
      721 agtcgggact gtcgaaccag gtttgcggga agacagagtg cggatagtcg tgcgccgagt
      781 agaccagctt gttggcgaca tcgagctcga ccggatggtc cttcaccccc atcaaattgc
      841 cgccccacca atagctctgg ccctgatagg tgccgatgcc ctcgacgaag atcagccagt
      901 tgggattggc cgcgccgatg gcgttgccgg cgtgttccgc cgccgccatc cagtcgttgg
      961 gcccgccgtc gccccaggtg ccgttgtagg gctcgttgtg caggtcggcg ccgatcaccg
     1021 tcggattgtg ggcgtaacgc gccgccagca tctgccagtc ggagatccat tcggcctggc
     1081 tgtgctgggc gtcgtaccac aggccgttgt ccgaggtgcc ggcgccggcc tcgctgcgat
     1141 gatggtcgag gatgattttc agcccgacct ggccggcgta atcgacgatc ttgtccatga
     1201 cctgtaccgc cgacaggccc tgcaggtcgg ggttcttgga aaagtcgatg ccgttgggcg
     1261 ccgcagccgt atgcagcatc tcgctggaga agggcagccg gatggtgttg aagcccaggc
     1321 tcaccatctg gtccatcatg tccttgtagc cgcgcgtcca caggccgtgc ggcgccatgg
     1381 tcgtggactc gaagccgaac cagttgacgc cggcgatctg caccgaatgg ccggcgctat
     1441 cgacaatctg gttgcccgag gtgctgaacc agcccgcggt tgcaccgctg cccggattgc
     1501 cttcaaccac cgacgtgtcg gagatgctga gcgtcggcaa tgccggcggc ggcgcgacgt
     1561 cgtcattgat gatggcgccg gccgcggtgc cgtgggcgat cgtggcgccg accgggccgg
     1621 tcagcacgac gctaaaacct tcgttgggct cgaccgtcgc gtcgccgatc gcggcgacct
     1681 ggatggtctt ctgggtctcg ccggccgcga aagtgagcga accggcttgg gcgacatagt
     1741 cgctgccggc ggtcgccgtg ccgtcggcgg tggcgtaatg cacggtcacc ggcgtcatcg
     1801 atgccgccga cagggttacc gtgaaactgc cctgccccgg cgccgcggcg c
//
LOCUS       DASWGA010000415         2510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1568824, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000415 DASWGA010000000
VERSION     DASWGA010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568824"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..672)
                     /locus_tag="VF991_09965"
     CDS             complement(<1..672)
                     /locus_tag="VF991_09965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556809.1"
                     /translation="MNASSAVSVAFDPLLGWPVLLVLGGVGLVLVLLGLSAGARGTLW
                     RLGSLIVVLAALANPSLIEEQRKPIADVALVVVDDSDSMAIGERRVQVQAAREALKKR
                     LTQQEGLEVREAVLPPAHIQLGSERPGGTRLIETMRSALVEVPPERLAGVVLLTDGQV
                     HDVPAIDSTKGLPPELGGAPVHALIAGKKNERDRLIVLEQSPRFGVVGREVITKFKIE
                     DPAGGT"
     gene            complement(669..>2510)
                     /locus_tag="VF991_09970"
     CDS             complement(669..>2510)
                     /locus_tag="VF991_09970"
                     /inference="COORDINATES: protein motif:HMM:NF025086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HEX9556810.1"
                     /translation="LLDERNRRRPVAILGERAAATGQPLLQEIYYLERALDPYVSLTI
                     GDRETVLTRNTAVLLIPDGAAPSANDRDEIAKWIERGGIAVRFAGPNLATGNDALVPT
                     PLRLGDRAMGGVMSWGQPTALAEFPPNSPFLGIPIPKDVRISQQVLAEPTPDLADKTW
                     ARLSDGTPLVTGEKRGQGYLVLIHTTANTGWSNMSLSGLFVNMLQRLVTLSRGVAGDG
                     VNKALKPWRTLDGFGRLGVPPAGAQMLPADAGETFKPKPTTPPGLYGDENAQVAFNIG
                     GHVGEPKPLVLPGGVNTDKLSEGGETDLSRWFLLGALLLLLADLFISLWLRGLLGRAF
                     RFGRRAGRAAPAALLLCLGLLVLPTESRAADQVAKPGPAPLSEEQALKGSLDIRLAYI
                     LTGDREVDDISKAGLEGLSEVLRSRTSVEPADPVGLDLERDEPRLYPLIYWPITSTQA
                     NLSPRASAALDRYIRTGGIIFIDTRDQQLSFDRSAGGNPDLKRLLGGIETPPLIAMPT
                     DHVLTKSFYLLSDMPGRWQGGKVWIEAGSGRVNDGVTAIVIGANDYAGAWAVDQRGRG
                     VLPVTPGAETHREMAYRVGVNLVMHALTGNYKDDQVHIQDIMQRLRR"
BASE COUNT          364 a          854 c          908 g          384 t
ORIGIN      
        1 ggtgccgccc gccggatcct cgatcttgaa cttggttatg acctcgcgcc ccaccacgcc
       61 gaagcgcggc gactgttcga gcacgatcag ccggtcgcgc tcgttcttct tgccggcgat
      121 cagggcatgg accggcgcgc cgcccagctc gggcggcagg ccctttgtcg agtcgatggc
      181 gggcacgtcg tgcacctggc cgtcggtcag cagcaccacg cccgccaatc gttccggggg
      241 cacttcgacc agcgccgagc gcatggtctc gatcaggcgc gtgccgcccg gccgctcgct
      301 gccgagctgg atgtgggccg gcggcagcac cgcctcgcgc acttcgagcc cttcctgctg
      361 ggtgagcctt ttcttcagcg cctcgcgcgc cgcctggacc tgcacgcggc gctcgccgat
      421 cgccatggaa tccgaatcgt cgaccaccac cagcgccacg tcggcgatcg gcttgcgctg
      481 ctcctcgatc agcgaggggt tggcgagcgc cgccagcacg acgatcagcg atcccagccg
      541 ccacagcgtg ccgcgtgcgc cggcgctcag ccccagcagc accagcacca ggccgacgcc
      601 gcccagcacc aacagcaccg gccagccgag cagcggatcg aaggcgacgg aaacggcgga
      661 gctggcgttc atcgccggag cctttgcatg atgtcctgga tgtgcacctg gtcgtccttg
      721 tagttgccgg tcagcgcatg catcaccagg ttgacgccga cgcgataggc catctcgcgg
      781 tgggtctcgg cgccgggggt caccggcagg acgccgcggc cgcgctggtc gaccgcccag
      841 gcgccggcat agtcgttggc gccgatcacg atggcggtga cgccgtcatt gacgcgcccg
      901 ctgccggcct cgatccagac cttgccgccc tgccagcgcc ccggcatgtc gcttaaaaga
      961 tagaacgact tggtcagaac atggtcggtt ggcatggcga tcagcggcgg cgtttcgatg
     1021 ccgcctaaaa gccgcttgag gtcggggttg ccgccggccg accggtcgaa ggagagctgc
     1081 tggtcgcggg tgtcgatgaa gatgatgccg ccggtgcgga tgtagcggtc gagcgccgcc
     1141 gaggcgcggg gcgagaggtt ggcctgggtc gaggtgatcg gccagtagat cagcggatag
     1201 agccgcggct cgtcgcgctc gaggtcgagg cccacgggat cggccggctc gaccgaggtc
     1261 cggctgcgca agacctcgct caggccttcg aggccggcct tgctgatgtc gtcgacttcc
     1321 ctgtcgccgg tcaggatgta ggcgaggcga atgtcgagcg agcctttcag cgcctgctcc
     1381 tcgctgagcg gcgccgggcc gggcttggcg acctggtcgg ccgcgcgcga ttcggttggc
     1441 aggacaagca ggccaaggca aagcagcagc gccgccggcg cggcccgacc cgctctccgc
     1501 ccgaagcgga acgcccggcc gagcagcccg cgcagccaca gcgagatgaa caggtcggcc
     1561 agcagcagca gcagcgcgcc cagcaggaac cagcgcgaca ggtcggtctc gccgccttcc
     1621 gacaatttgt cggtgttcac cccgccgggc aggaccagcg gcttgggctc gccgacatgg
     1681 ccgccgatgt tgaaggcgac ctgggcgttc tcgtcgccgt agaggccggg cggcgtggtc
     1741 ggcttgggtt tgaacgtctc gccggcgtcg gccggcagca tctgcgcgcc ggccggcggc
     1801 acgcccaggc ggccgaagcc atcgagcgtg cgccacggtt tcagcgcctt gttgacgccg
     1861 tcgccggcga ctccacggga gagcgtcacc agccgctgca gcatgttcac gaacaggccg
     1921 ctcaacgaca tgttgctcca gccggtgttg gcggtggtgt ggatcagcac caggtaaccc
     1981 tgaccgcgtt tttcgccagt gaccagcggc gtgccgtcgc tcagccgcgc ccacgtcttg
     2041 tcggcgaggt cgggggtcgg ctcggccagc acctgctggg agatacggac gtccttgggg
     2101 atcgggatgc cgaggaacgg gctgttgggc gggaattcgg cgagcgcggt gggctggccc
     2161 cagctcatga cgccgcccat cgcacggtcg ccgagccgca agggcgtcgg caccagcgcg
     2221 tcgttgccgg tggcgaggtt gggcccggcg aagcgcacgg cgatgccgcc gcgctcgatc
     2281 cacttggcga tctcgtcgcg atcgttggcc gagggggcgg cgccgtctgg gatcagcaaa
     2341 acggcggtgt tgcgcgtcag cacggtctcg cgatcgccga tggtgaggct gacataggga
     2401 tcgagcgcgc gctcgagata gtagatctcc tgcaggagcg gctggccggt ggcggcggcg
     2461 cgctcgccca ggatcgccac ggggcggcgg cggttgcgct cgtcgagcag
//
LOCUS       DASWGA010000416         2053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_555981, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000416 DASWGA010000000
VERSION     DASWGA010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_555981"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /locus_tag="VF991_09975"
     CDS             <1..591
                     /locus_tag="VF991_09975"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX9556811.1"
                     /translation="GFIANQPQRLGGMLDANACDKGAHFLALCDAYGLPLVSFIDVPG
                     FSIGSGAERTNLGRRSAKLIFEWGHISVPRLSVVLRKGYGLGYFAMSGGRSFAADACF
                     AWPTAEICAMSIEGAIDVAFRKDYEKAPDPQKRRQEMIDETRARIGALRAAEGFGIDD
                     VIDPRDTRRRLIEILAQTPARRPNDHPPKHRSIVPI"
     gene            complement(632..1696)
                     /locus_tag="VF991_09980"
     CDS             complement(632..1696)
                     /locus_tag="VF991_09980"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEX9556812.1"
                     /translation="MGKRIAVVGVGALGGYVGGNLVHSGEDVTLIDFWPENIEAIRKR
                     GLELDGVTPEEKFTVTNAKTMHLTEMQDLSRQKPIDIAFVSMKSYDTEWATALIKQYL
                     APDGYVVSLQNCLNEERIAGVVGWGKTVGMVASLISVDMFEPARIRRTVAKGGDKHTV
                     FRVGEVHGRITKRVEELRDMVGRIDSAKTTTNLWGERWSKLCQNGMKNGVSAATGLTG
                     ADCDRNDAIRRFSIKLGGEAVRVGQALGYHIEKIGKLEPETLAKASEGDKTALDEIES
                     ILRPGSNVNPNPRADIQRPSMAQDIRKGRRTEIEFMNGYIADRGNYIGVPAPTHAKLT
                     EIVKKVERREVKAAPALLGG"
     gene            complement(1708..>2053)
                     /locus_tag="VF991_09985"
     CDS             complement(1708..>2053)
                     /locus_tag="VF991_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556813.1"
                     /translation="AATFDAKGLAALNSSDEVKLTRHRDATGLAGAARGMLAQQNDRV
                     IQSLDKVAAPTLVLVGANDTNFIAATDYMAAKIKGATKVVIPDAGHASNLHQPARFNQ
                     AVEAFLAKLPAT"
BASE COUNT          302 a          693 c          678 g          380 t
ORIGIN      
        1 ggcttcatcg ccaaccagcc gcagcgactg ggcggcatgc tcgacgccaa cgcctgcgac
       61 aagggcgccc atttcctggc gctgtgcgat gcctacggcc tgccgctggt ctccttcatc
      121 gacgtgccgg gcttctcgat cggctcgggc gccgagcgca cgaacctcgg ccgccgcagc
      181 gccaagctga tcttcgaatg gggccatatc agcgtgccgc gcctctcggt ggtgctgcgc
      241 aagggctatg ggctgggcta cttcgccatg agcggcggcc gcagctttgc cgccgacgcc
      301 tgcttcgcct ggccgaccgc tgagatctgc gccatgtcga tcgagggcgc gatcgatgtc
      361 gccttccgca aggactacga aaaggcaccc gatccgcaga agcgtcgcca ggagatgatc
      421 gatgagacgc gcgccagaat cggcgccttg cgcgccgccg agggcttcgg catcgacgat
      481 gtcatcgatc cgcgcgacac gcgccgccgg ctgatcgaga tccttgctca gaccccggcg
      541 cgccgaccca acgaccaccc gccgaagcac cgctcgatcg tgccgatcta ggggtcgata
      601 gcaacccgtg tcatgacagt tggctcatcc actaaccgcc cagcagcgct ggcgcggcct
      661 tcacttcccg tcgttcgacc ttcttgacga tctcggtcag cttggcgtgg gtcggcgccg
      721 gcacgccgat atagttgccg cggtcggcga tgtagccgtt catgaactcg atctcggtgc
      781 ggcggccctt gcggatgtcc tgggccatcg acggccgctg gatgtcggcg cgcgggttgg
      841 gattgacgtt ggagccgggc cgcaggatcg actcgatctc gtcgagcgcg gtcttgtcgc
      901 cctccgacgc cttggcgagc gtttccggtt ccaacttgcc gatcttctcg atgtggtagc
      961 ccagcgcctg gccgacccgc accgcctcgc cgccgagctt gatcgaaaag cggcggatgg
     1021 cgtcgttgcg gtcgcagtcg gcgccggtga gcccggtggc ggccgagacg ccgttcttca
     1081 tgccgttctg gcagagcttg gaccagcgct cgccccacag gttggtggtg gtcttggcgc
     1141 tgtcgatgcg gcccaccatg tcgcgcagct cctcgacccg cttggtgatg cggccgtgga
     1201 cctcgccgac ccggaacacg gtgtgcttgt cgccgccctt ggcgacggtg cgtcggatgc
     1261 gggcgggttc gaacatgtcg accgagatca acgaagccac catgcccacg gtcttgcccc
     1321 agccgacgac gcccgcgatg cgctcctcgt tgaggcaatt ctgcagcgac acgacgtaac
     1381 cgtccggcgc caggtactgc ttgatcagcg ccgtcgccca ttcggtgtcg taggacttca
     1441 tcgagacgaa ggcgatgtcg atcggcttct ggcgcgagag gtcctgcatc tcggtgagat
     1501 gcatggtctt ggcgttggtg acggtgaact tctcctccgg cgtcacgccg tcgagctcga
     1561 ggccgcgctt gcggatggcc tcgatgttct ccggccagaa atcgatcagg gtcacgtcct
     1621 cgccggaatg gacgagattg ccgccgacat aaccgcccaa cgcgccgacg ccgacgaccg
     1681 cgattcgctt gcccatggtc cgtgctccta agttgccggc agcttggcga gaaacgcctc
     1741 gaccgcctga ttgaaacgcg cgggctgatg caggttcgac gcatggcccg cgtcgggaat
     1801 gaccaccttg gtcgccccct tgatcttggc cgccatatag tcggtggcgg cgatgaagtt
     1861 ggtgtcgttg gcgccgacca gcaccagtgt cggcgccgcg accttgtcga gcgactggat
     1921 cacccgatcg ttctgctggg ccagcatgcc gcgcgcggca ccggcgaggc cggtcgcgtc
     1981 gcggtggcgc gtgagcttga cctcgtcgct ggaattgagc gcggccagcc ccttggcgtc
     2041 gaaggtcgcc gcg
//
LOCUS       DASWGA010000417         4054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1814470, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000417 DASWGA010000000
VERSION     DASWGA010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4054
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1814470"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="VF991_09990"
     CDS             complement(<1..292)
                     /locus_tag="VF991_09990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013894609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9556814.1"
                     /translation="MADGKGRTALVTGATDGVGRVVARELAKQGWRVLVHGRDRGRGE
                     ALVHEIGQAGGSATFLAADLASLAEVRRLADDVRRETDRLDLLINNAGIGTAG"
     gene            371..880
                     /locus_tag="VF991_09995"
     CDS             371..880
                     /locus_tag="VF991_09995"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEX9556815.1"
                     /translation="MEVEFRRVGIHDHASTRELVYDAFESAGSEETAAFLDALRGEGC
                     ILAEWLAEDSSGPIAHIVFSRVWLEQRDGRRLKAAMLTPLAVRPDRQRLGTGTRLMNH
                     ALKELESSGETLFFVLGHPSYYPRVGFRPASAAAIESPWSGNPAFMVRGEIVPAGRLV
                     MPSVIADAH"
     gene            complement(874..1788)
                     /locus_tag="VF991_10000"
     CDS             complement(874..1788)
                     /locus_tag="VF991_10000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003530794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX9556816.1"
                     /translation="MPDMGTPSLDQLRVFLTVVETGSFAAAGRRLGRATSAISYTIAN
                     LEMQLGIALFDRERTRKPVLTEAGAAVLSKARAVSGGIDDLRASVKGLLGGLEAEVTL
                     VVDVMFPTSRLVDAVQAFEAKFPTVTLRLHVEALGAVAQLVQAGIAGIGVGGTQHTTL
                     PGLEQVAVGDVELIPVAAPQHPLARPPPKVPGEARQHRQLILTVRSSFTEGQDVGVVG
                     NETWRLADLGAKHALLLAGSGWGFMPEPIVRADLASARLVRLDLPEARGGSYAMQAIW
                     RTDSPPGPAAAWMIQHFVGQAAGSGLDQ"
     gene            1910..2764
                     /locus_tag="VF991_10005"
     CDS             1910..2764
                     /locus_tag="VF991_10005"
                     /inference="COORDINATES: protein motif:HMM:NF014708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEX9556817.1"
                     /translation="MALSASITRSPAQSPVRQIARRTRGHSEGSITRLMSPSDFGQLL
                     KPFVFLDLFDNKGIPSKGFGLHPHSGIATLTYLAEGSVAYEDTNGATGVLPAGGVEWM
                     QAGGGVWHGGGAGKPGRTRGFQLWIALPPELELGPSVSLYQSPEDIQQEGPARVLLGR
                     YGSTTSAIAAPSPINYLAVRLKQGERWRYQPPQGHTVLWIAVSSGAVAVPETLRQGDL
                     AAFEPSNEAIEVEAQSDAEFVVGSAVPHDHDLVLGYYSVHTSADALREGEAGISAIKA
                     RLVQEGRL"
     gene            complement(2761..>4054)
                     /locus_tag="VF991_10010"
     CDS             complement(2761..>4054)
                     /locus_tag="VF991_10010"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9556818.1"
                     /translation="KKSHGKKLMSRSSAPDPRDEVATASLAGWLVFATAGLFVFYQLI
                     LQSLPSVIRDGLVVDFSLTDSGFGSLSASFYYPYMLLQIPAGLLVMRFGSRRVLMCGL
                     VLCIVASFITAISQGIVYIAAARVLMGLGAAPTFVATMALVARWFPSRLFPILVALTE
                     TSGMLGAALGQEILGFIVESAGWRAGMSLCGWLGALILVLTWLLVRDQPRSNVPRAGT
                     QALSAAAVMRLMLSPTLILAGLVGGMIYSAGLSFAMLWGVAFFEQHLGVDLETASFIA
                     SFYSLGIVIGLLAFGFACGRLAGPIVLLGLGTFFTGLAMAAILFAPASLIFSSLAMLV
                     CGIASGSYALSFYLVKSQVTDRETGAAVAFANMLIIGVGGLVLQPLIAVIADAEGRAV
                     TTPNALGILVWAQGLGLILLGPLIWSLRARRPADPMSA"
BASE COUNT          781 a         1361 c         1288 g          624 t
ORIGIN      
        1 cgccggccgt gccgatgccg gcattgttga tcaagagatc gagccggtcc gtctcccggc
       61 gcacgtcatc cgccaggcgg cgcacctcgg ccagcgacgc aagatcggcg gccagaaagg
      121 tggcgctgcc gcccgcctgc ccgatctcgt gcaccagcgc ttcgccgcgc ccgcgatcgc
      181 ggccatgcac cagcacgcgc cagccctgct tggccagctc tctcgccacc acgcggccca
      241 cgccgtcggt ggcgccggtc accagagccg tccgtccttt gccatcagcc atgccgatct
      301 cctagggaat gatgtcgatg cgctcctggt gcatagtagt cgctgccatg acgcagacgc
      361 gagagcagtg atggaagtcg aattccgccg cgtcggcatt cacgaccatg cttcaacccg
      421 cgagctggta tatgacgcct tcgaatccgc aggatccgag gagactgccg cgtttctcga
      481 cgcgcttcga ggcgagggct gcatcttggc agaatggctt gccgaggatt cgagtggacc
      541 catagcgcac atcgtcttct cgcgggtgtg gctggagcaa cgagatggcc gccggctgaa
      601 ggccgcgatg ctgacgcccc ttgcggtccg gccggatcgt caacgcctcg ggactggcac
      661 ccggttgatg aaccacgcct tgaaggaatt ggaatcgagc ggcgagacac tgttcttcgt
      721 gctcggccat cccagctact atccgcgagt cggttttcgt ccagcctcgg cggccgcaat
      781 cgagagtccg tggtcgggca atccagcgtt tatggtcagg ggagaaatcg ttccagccgg
      841 acggcttgtc atgccttcgg tgatcgccga cgctcattga tccagtcctg accccgccgc
      901 ctggccgacg aagtgttgga tcatccaggc cgcggcaggg cccggcgggc tgtccgtacg
      961 ccagatcgcc tgcatggcat aggaaccgcc gcgcgcctcg ggaagatcga gccgcaccag
     1021 tcgggctgaa gcgaggtcgg cgcgaacgat cggctcgggc atgaaacccc agccgctgcc
     1081 ggcaagaagc aaggcgtgct tggcgccaag atcggccagt cgccatgttt cgttgccgac
     1141 cacgccgaca tcctggcctt cggtgaagga cgatcgcacc gtgaggatga gctgccggtg
     1201 ctggcgcgct tctccgggga ccttcggcgg cgggcgcgcc agcggatgct gcggcgccgc
     1261 caccgggatc agttcgacat cgccgaccgc gacttgctcg agcccaggca gggtggtgtg
     1321 ctgggtgccg ccgacgccga tgccggcgat gcccgcctgc acgagttggg cgacggcgcc
     1381 gagagcctcg acatgcaggc gcaaggtcac cgtcggaaat ttcgcttcga aggcctgcac
     1441 ggcatcgacc agacgcgacg ttggaaacat cacgtcgacg accagtgtca cctcggcttc
     1501 gaggccgccc agcagtccct tgacgctcgc gcgcagatcg tcgatcccgc ccgacacggc
     1561 gcgggctttc gacagcacgg cggcgccggc ttcggtaaga accggcttgc gcgtgcgctc
     1621 gcgatcgaac aaggcgatgc cgagctgcat ctcgagattg gcgatggtgt agctgatggc
     1681 ggaggtggcg cggcccagcc gccggcctgc cgcggcaaaa ctgcccgtct ccacgacggt
     1741 caggaagacc cggagctggt cgaggctggg cgtccccata tccggcattt caggttcctt
     1801 gaacgttata tccggaactt tacgggtgtt ccggattggc gtgaaccctt agctctctag
     1861 acgagccaat cctgctgcgt tttggccgga aaaccccaag gaggccccaa tggccctttc
     1921 tgcgtcgatc acccgaagcc ctgcgcaaag ccctgtccgc cagatcgccc gacgcacccg
     1981 cggtcacagc gaaggatcga tcacccgtct gatgagcccc tccgacttcg gacagctcct
     2041 gaagccgttc gtcttccttg atctcttcga caacaaggga atccccagca agggcttcgg
     2101 actacatccg cattccggca ttgccaccct cacctacctt gccgaaggca gcgtcgccta
     2161 cgaagacacc aacggcgcga caggcgtcct gcccgcaggc ggcgtcgagt ggatgcaggc
     2221 cggcggcggc gtgtggcatg gcggcggcgc gggcaagccg ggacggacgc gcggctttca
     2281 gctttggatc gccttgccgc ccgagctcga gctcggaccg tcggtcagtc tctatcagag
     2341 tcccgaggac attcagcaag aaggccctgc gcgcgtgctg ctcggccgct acggctccac
     2401 gacgagcgcc atcgcggcac cgtcgcccat caactacctg gctgtgcgct tgaagcaagg
     2461 cgagcgctgg cgttaccagc caccgcaagg acacaccgtg ctctggatcg ccgtgagctc
     2521 aggcgcagtg gcggttcccg agacgcttcg gcagggcgac ctggcggcct tcgagccgtc
     2581 gaacgaagcc atcgaggtcg aggctcaatc cgacgcggag tttgtcgtcg gctcggccgt
     2641 tccgcacgat cacgacctcg tgctgggata ttactcggtg cacaccagcg ccgacgcgct
     2701 gcgcgagggc gaggctggga tctcggcgat caaagcgcgc ctggttcagg agggccgact
     2761 ttaggcggac ataggatcgg ccgggcgccg cgcacgcagg gaccagatca acgggcccag
     2821 caggatcagg cccaaacctt gcgcccatac caggatgcca agcgcattcg gcgtggtcac
     2881 cgcacgaccc tcggcatcgg caatcaccgc gatcagaggc tgcaacacca gcccgccgac
     2941 gccgatgatg agcatattgg caaaagcgac cgcagcgccg gtctctctgt ccgtcacctg
     3001 cgatttgacc aggtaaaagc tcagcgcata cgagccactg gcgattccgc agaccagcat
     3061 cgccagtgac gagaaaatga ggctcgccgg cgcaaagaga atcgcggcca tcgccaagcc
     3121 ggtgaagaac gtccccagcc ccagcagcac aatcggaccg gcgaggcggc cgcaggcgaa
     3181 gccgaacgcg agcaggccga tgacaatgcc caaggaatag aacgaggcga taaacgacgc
     3241 cgtctccaga tcgactccca gatgctgctc aaaaaacgcc acaccccaca gcatggcgaa
     3301 ggacagaccg gcgctgtaga tcattccgcc gacaagcccg gccaggatga gggttggcga
     3361 aagcatcaag cgcatcacgg cggcggcgga cagcgcctgc gtgccggctc tgggcacatt
     3421 cgagcgcggc tggtcccgca ccaacagcca tgtcagcacc agaatgagag cgcccagcca
     3481 gccacacagc gacatccctg cgcgccaacc tgcgctctcc acaatgaagc ccaggatctc
     3541 ctgtccgagc gcggcgccca gcatgccgct ggtttccgtt aacgcgacga ggatcgggaa
     3601 gagccgcgac gggaaccagc gggcgaccag ggccatcgtc gccacgaagg tcggcgccgc
     3661 cccgagcccc atgaggactc gggccgcggc gatatagaca attccctgcg agatcgcggt
     3721 gatgaacgag gccacaatgc aaaggacgag cccgcacatc aggacccggc gcgaaccgaa
     3781 ccgcatcacc agcagcccag ccgggatctg cagcagcatg tacgggtagt agaaactggc
     3841 ggaaagactg ccgaaaccgg aatcggtcag cgaaaaatcg accaccaggc cgtctctgat
     3901 gacgctcggc agcgattgca ggatgagttg gtagaaaaca aacaggcccg ccgtcgcgaa
     3961 taccagccac ccggccagcg aagcggtcgc gacttcgtcg cgcgggtcgg gagcggagct
     4021 ccgactcata agctttttgc catggctctt cttg
//
LOCUS       DASWGA010000418         8458 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_52142, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000418 DASWGA010000000
VERSION     DASWGA010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8458
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52142"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1326
                     /locus_tag="VF991_10015"
     CDS             <1..1326
                     /locus_tag="VF991_10015"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556819.1"
                     /translation="AVLVPAAVVAVLASANGWLALALLPFLLAVGLSPFLMRKRVDRL
                     GSQAREAAGELGAFAVDSVQGLGEIVAFQQEASRGNKLDALSQRHIALRLPFFSELTL
                     QHALLEVLTGLGGLAVVVTGAALSAHGTLDPGLLPLMTILAMAAFLPVSEIAQIGRQL
                     ADTLGATRRVYALANEPVPVRDGPGVPAAKGPAALALDKVNFTYPGQSRRALSEVSFD
                     VPAGRTVALVGTSGAGKTTTAQLLMRFWDPDSGRITLNGADLRHYKLDELRRLIALVA
                     QDTYLFNDSLRANILIARPDASEAELRAAVKHASLSDLVAALPEGLDSPVGERGTSLS
                     GGQRQRVAIARAFLKDAPILVLDEATSHLDAVNEQAVRRALDVLQADRTTIVIAHRLS
                     TVRDADLIVVLDEGRVAEIGTHASLLARGGLYARLVSRQLASVYAPAAS"
     gene            1340..1723
                     /locus_tag="VF991_10020"
     CDS             1340..1723
                     /locus_tag="VF991_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9556820.1"
                     /translation="MFSHVTVGSNDVAKAKGFYDSLLKPLGLVRHADYPNGVGYSRTG
                     GRPQLWIVSPLDKKTASVGNGITVGLEAADRAAVDAAYKAGMSAGGKDEGAPGLRTHY
                     HPNYYGAYLRDPDGNKICVVCHKPA"
     gene            1781..2485
                     /locus_tag="VF991_10025"
     CDS             1781..2485
                     /locus_tag="VF991_10025"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9556821.1"
                     /translation="MRLKEFLSVRAIDFVSVNVLEDPNGLAELQKLGVRSVPVLSRGD
                     KYTFGQSTKQIVDFLGLKEKSGPELSTEELAARVDKFMGAALELIPLMPHDRLDTHVP
                     GRPRSYRTLAFHLFRVIDAFLDANEGITLVQEMFREEPAADAGADTLLAYGEKVRRRF
                     GDWWSKGDTSPAKSLPTYYGPQTLHELMERTTWHCGQHVRQYMMLLEREGVSHRQPLV
                     AADFARLPMPQNVWDG"
     gene            2498..3121
                     /locus_tag="VF991_10030"
     CDS             2498..3121
                     /locus_tag="VF991_10030"
                     /inference="COORDINATES: protein motif:HMM:NF024969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX9556822.1"
                     /translation="MSKFPGHKYADVGAFVADYAELTAAALKSVRPSEIDRAVAALRH
                     AVEHDKLIFACGNGGSAAIANHLSCDCSKGIAADTGLRPRVVSLSSTVELITAIANDV
                     DYGEVFSHQLRNAARPGDVLITISSSGDSENIVRALAWARDNGMTSIAMSGFSGGRSA
                     RTADINLHVAAENYGIVEDAHQGLMHILAQYLRLSEVTADRMPALRF"
     gene            3232..3576
                     /locus_tag="VF991_10035"
     CDS             3232..3576
                     /locus_tag="VF991_10035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556823.1"
                     /translation="MRNSATHDGKDLAKDLTKQIALLRTQLDELAETVNGTGSTLVGR
                     GEEVLEDALKSARELIAKYGDTAKAMAKDAARLKDKASDTLIEQTEARPFTTLAAIVG
                     IGFLAGWLFRRR"
     gene            3615..3878
                     /locus_tag="VF991_10040"
     CDS             3615..3878
                     /locus_tag="VF991_10040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556824.1"
                     /translation="MIGPLLRVAAQAAAARSLRAAVHDVTMGMLLAVAAATAVAIGVA
                     CLTAAAFIVLERQLDAAGAWAILGAVWGLAGLFYFAVARRRRG"
     gene            complement(3845..5110)
                     /locus_tag="VF991_10045"
     CDS             complement(3845..5110)
                     /locus_tag="VF991_10045"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX9556825.1"
                     /translation="MDILSNEKSERYSSDKSSSEKSERYPVVHVQGGSAIRRPLIVLA
                     VCAVAAIGYLARDFLIPTAGAVVLALILTPVANTFERLRLSATPAAAASVTLLALGLA
                     GLLAISIPAVSNWIDQGPFLTYTMERKLEGLRKSLAVVQQVSKQVEQATAAAAPAAPA
                     TTPPEKVVVREKSLLGDLATTAPGVLLQIGYAGVLAFMLLTHRNTSRRQIMRIPGSFN
                     TRVRLARMMRDINERVAQYLFSLAVIYTCVAAVATAALALLGFPNAIVWGVLMGIAGF
                     VPFIGSAVMIAVVALVALLTFEDWPHIVAAPAVLLAIHILESQFITPLFVSRRCALNT
                     VAVFATIALLGWMWGTIGAIVAVPLLILLSTIAAHLPSLRWLDVLLADDRPVSEKLAG
                     KPMLASVKRPSPKSASALRQPRRRLATAK"
     gene            5312..6364
                     /locus_tag="VF991_10050"
     CDS             5312..6364
                     /locus_tag="VF991_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEX9556826.1"
                     /translation="MPTYANTVPVMERHRFDAASLDRYLSDRLDGYRGGLAVRQFDSG
                     HSNPTFFVSAEMAGGRRQDFVLRKKPPGKLVASAHQVDREFRVIAALAATDVPVAPAR
                     LLCTDDAVIGQMFYLMDAVPGRILVDASMPDQTPAERAAIFDSMNDVLARLHKVDPVK
                     VGLGDYGRSGHYIARQVARWSKQYAELKTEDIPAMDKLATWLPEHIPAEDPTTIVHGD
                     YRLGNLIVHPSEPRIVAVLDWELSTLGHPLCDIAYNCLGYHLPEPPHGFAKVDFKKLG
                     LPTENDYVAAYCRRTGRDAIAHWNYYLAFSLFRLAAIAQGVYRRGLQGNSSNPDSIKM
                     SKSARERAELAWSLVS"
     gene            6556..7305
                     /locus_tag="VF991_10055"
     CDS             6556..7305
                     /locus_tag="VF991_10055"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9556827.1"
                     /translation="MPTFQHADAEIHYEVHGNGFPLLLYAPGGLRSQLDYWKASPADP
                     NQPAPWMNPMQALADRFTVVGMDQRNAGKSRAGLASDHGWHTYAEDHFALMDHLGFKQ
                     FAVMGGCIGGSFCFEAIEHDPPRIAAAVLQNPIGLWENRDTWDAAIKGFSETMRARDP
                     SITQQTVDSFGRNMFGSDFVFSVTRDFVKNCRTPLLLQPGIDKPHPAETSAEIAALAP
                     NIEVQKDWRGPQFLNESIRRVRAFLDKNTPK"
     gene            7424..8251
                     /locus_tag="VF991_10060"
     CDS             7424..8251
                     /locus_tag="VF991_10060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556828.1"
                     /translation="MQVRSSCAATRASAAAKPTPAPQQQQAVAPPPPPAPDPNLFTTC
                     GAADRQGVRTCYEVPPSGLACRKLLQQGGERMWSQDMATCDSTDVLQQRNAYFANLKA
                     PSPRQEFGADAGRKQDALAKLSPQCRARLNGLLQGADSGDKEKAYTAYGGLRAQCDAE
                     MKALASAAEVDLPERIPSSRARTAMDKAMSGDPDRMAQATADRGYDAPYDMGEVIDFG
                     LSLINLLSGFAGVYAPMPGGAAASYSGGNFHRRVYGQGAPYTPAPRYEPSTITGTKK"
BASE COUNT         1384 a         2965 c         2769 g         1340 t
ORIGIN      
        1 gccgtcctgg tgccggccgc cgtcgtcgcc gtgctggcct cggccaatgg ctggctggcc
       61 ctggcgctgc tgcccttcct gctcgcggtg ggcttgagcc cgttcctgat gcgcaagcgc
      121 gtcgaccgct tgggcagcca ggcgcgcgag gcggcgggcg agctcggcgc cttcgcagtc
      181 gattcggtgc agggcctggg cgagatcgtg gccttccagc aggaagcgtc gcgcggcaac
      241 aagctcgacg cgctgtcgca acgtcacatc gcgctgcgcc tgcccttctt tagcgagctg
      301 acgctgcagc acgcgctctt ggaagtgctg accggcctgg gcgggctggc tgtcgtcgtc
      361 accggggcgg cgctctccgc ccatggcacg ctcgaccccg gcctgctgcc gctcatgacc
      421 atccttgcca tggcggcgtt cctgccggta tcggaaatcg cccagatcgg ccgccagctc
      481 gccgatacgc tgggcgccac gcgccgcgtc tatgcgctgg ccaacgagcc ggtgccggtg
      541 cgcgacgggc cgggcgtgcc ggccgccaag ggccccgcgg cgctggcgct ggacaaggtg
      601 aacttcacct atcccggcca gtcgcgccgc gcgctgtccg aggtgagctt cgacgttccc
      661 gccggcagga cggtggcgct ggtcggcacc tcgggggcag gcaagaccac gacggcgcag
      721 ctcctgatgc gcttctggga tcccgactcc ggccgcatca ccttgaacgg cgccgacctg
      781 cgccactaca agctcgacga gctgcgccgc ctgatcgcgc tcgtggcgca ggatacctat
      841 ctcttcaacg acagcctgcg cgccaacatc ctgatcgccc ggcccgatgc ctcggaggcc
      901 gagctgcggg ctgccgtcaa gcacgcctcg ctctccgatc tggtcgccgc cctgcccgag
      961 gggctcgact cgccggtcgg cgagcgcggc accagcctgt cgggcggcca gcgccaacgg
     1021 gtcgccatcg cgcgcgcttt cctgaaggat gcgcccatcc tggtgctcga cgaggcgacc
     1081 tcgcatctcg acgcggtgaa cgagcaggcg gtgcgccgcg cgctcgacgt gttgcaggcc
     1141 gaccgcacca ccatcgtcat cgcccatcgc ctgtcgacgg tgcgcgacgc cgacctgatc
     1201 gtggtgctgg acgagggccg cgtcgccgag atcggcacgc acgcctcgct gttggccaga
     1261 ggcggcctct atgcccggct ggtatcgcgc cagcttgcgt cggtctatgc tccggccgcg
     1321 tcctgaaaga ggaaatccca tgttcagcca tgtcaccgtc ggcagcaacg acgtcgccaa
     1381 ggccaagggc ttttacgaca gcctgctgaa gccgttgggc ctggtgcgcc acgccgacta
     1441 tcccaatggg gtcggctata gccgcaccgg cgggcggccg cagctctgga tcgtcagtcc
     1501 gctcgacaag aagacggcga gtgtgggcaa cggcatcact gtcggtctcg aggcggccga
     1561 ccgcgccgcc gtcgacgccg cctacaaggc aggtatgtcg gccggcggca aggacgaggg
     1621 tgcgcccggc ctgcgcaccc actatcatcc caactactat ggcgcctatc tcagggatcc
     1681 cgacggcaac aagatctgcg tcgtctgcca taagcccgcg taggagatga gcatgagcga
     1741 gccattcaag gtgttctggc agcccggttg aacgagctgt ctgagactca aagagtttct
     1801 atcggtccgt gcgatcgact tcgtttccgt gaatgtgctt gaagacccga acggcctggc
     1861 cgagctgcag aagcttggcg tgcgctcggt gcccgtgttg tcgcgcggcg acaagtacac
     1921 gttcggccag agcaccaagc agatcgtcga cttcctgggc ttgaaggaga agtccgggcc
     1981 cgagctctcg accgaggaac tggcggcgcg ggtcgacaag ttcatgggcg cggcgctcga
     2041 attgatcccg ctgatgcccc acgaccggct ggacacgcac gtgccgggcc ggccgcgcag
     2101 ctatcgcacc ttggctttcc atcttttccg cgtgatcgac gcctttctcg acgccaacga
     2161 aggcatcacc ctggtccagg agatgttccg cgaggagccc gcagccgatg ccggcgccga
     2221 taccctgctc gcctacggcg agaaggtgcg ccggcgcttc ggcgattggt ggagcaaggg
     2281 cgacacctcg cccgccaagt cgctgccgac ctattacggt ccgcaaacgt tgcacgagct
     2341 gatggaacgc acgacctggc actgcggcca gcacgtccgg caatatatga tgctgctgga
     2401 gcgtgagggc gtctcccatc gccagcccct ggttgccgcc gacttcgcca ggctgccgat
     2461 gccgcagaac gtgtgggacg gctgacgtgc cgggaccatg agcaagtttc ccggccacaa
     2521 atacgccgat gtcggcgcct tcgttgccga ctacgccgag ctgacggcgg cggcgctgaa
     2581 atccgtccga ccgtccgaaa tcgaccgggc cgtcgcggcg ctgaggcacg ccgtcgagca
     2641 cgacaaactg atcttcgcct gcggcaacgg cggctcggcc gcgatcgcca accatctcag
     2701 ctgcgactgc tcgaagggca tcgccgccga caccggcctg cgcccgcgcg tggtcagcct
     2761 gtcatcgacc gtcgaactga tcacggcgat cgccaacgac gtcgactacg gcgaagtctt
     2821 cagccatcaa ctgcgcaacg ccgcccgccc cggcgatgtg ctcatcacca tttcctcgtc
     2881 gggcgattcg gagaacatcg tgcgcgcgct cgcctgggcg cgcgacaacg gcatgacgag
     2941 catcgccatg tcgggttttt cgggcggtcg cagcgcccgg acggcggaca tcaacctgca
     3001 tgtcgctgcc gagaactacg gcatcgtcga ggacgcccat cagggcctga tgcacattct
     3061 cgctcagtat ttgcggctgt ccgaggtgac ggccgaccgc atgccggcgc tgcgtttctg
     3121 actccctctg accgttgatt ctgaccaccg caatttgtcc ggcgggcgag gaaacctccg
     3181 gcagcctccg gcgttcactc ccctgaaccc accagccgag ggagcgacgc catgcgcaat
     3241 tctgcgaccc atgacggcaa ggatctggcc aaggatctga ccaagcaaat cgccctcctc
     3301 cgcacccagc tcgacgagtt ggccgagacc gtcaacggta ccggcagcac gcttgtcgga
     3361 cgcggtgagg aggttctcga ggacgccctg aaatcggccc gcgagctgat cgccaaatac
     3421 ggcgacaccg ccaaagcgat ggccaaggat gccgcccggc tcaaggacaa ggcgagcgac
     3481 acgctgatcg agcagaccga ggcgcgacct tttaccacgc tggccgcgat tgtcggcatc
     3541 ggcttcctcg ccggctggct ttttcgccgg cgctgaccgg ccgaagaagc ccggcggcgc
     3601 gatcgagacc ttccgtgatc ggccctctcc tgcgtgtggc ggcccaggcc gccgccgcgc
     3661 gatcgctgcg cgctgccgtc catgacgtga cgatgggcat gctgctggcc gtggctgccg
     3721 ccaccgccgt ggcgatcggc gtggcatgcc ttaccgcggc ggccttcatc gtgctggaac
     3781 gccagctcga tgccgccggt gcctgggcga tcctcggcgc cgtctggggc ttggcaggtc
     3841 tcttctactt cgccgtcgcc agacgccgcc gcggctgacg gagagccgac gccgacttgg
     3901 gcgacgggcg cttcaccgag gcgagcatag gtttgccggc cagcttctcg ctgaccggcc
     3961 gatcgtccgc cagcagcacg tcaagccagc gcagcgacgg caggtgcgcg gcgatggtgc
     4021 tgagcaggat caacagcggc accgccacaa tggcgccgat cgtgccccac atccagccca
     4081 gcagggcaat ggtggcgaac accgccacgg tgttgagcgc gcagcgccgg cttacgaaca
     4141 gcggcgtgat gaactgtgat tcgaggatgt ggatcgccag cagcaccgcc ggtgcggcga
     4201 cgatgtgcgg ccagtcctcg aaggtgagca gcgccaccag cgcgaccacg gcgatcatca
     4261 ccgccgagcc gatgaacggc acgaagccgg cgatgcccat cagcacgccc cagacgatgg
     4321 cgttggggaa acccagcagc gccagcgccg cggtggcgac cgcggcaacg cacgtgtaga
     4381 tgacggcaag cgagaacagg tactgggcga cacgctcgtt gatgtcgcgc atcatccggg
     4441 cgagtcgcac gcgggtgttg aaggagcccg gaatgcgcat gatctgccgc cggctggtgt
     4501 tgcggtgggt gagcagcatg aaggccagca cgcccgcata gccgatctgc agcaggacac
     4561 ccggcgccgt ggtggcaagg tcgccgagca gcgacttctc gcggaccacg accttctccg
     4621 gcggcgtcgt ggcgggcgca gcgggcgctg ccgccgccgt tgcctgttcg acctgcttgg
     4681 agacctgctg cacgacggcc agcgacttgc gcaatccctc gagcttgcgt tccatcgtgt
     4741 aggtgaggaa cgggccctgg tcgatccagt tcgacacggc gggaatcgaa atggcgagca
     4801 gccccgccaa gccgagcgcc aacagggtga ccgaagcggc ggccgccgga gtcgcggaca
     4861 ggcgcaaccg ttcaaaggtg ttggcgaccg gcgtcaggat cagcgccagc acgacggcgc
     4921 ccgcggtggg gatgaggaag tcccgcgcca ggtagccgat cgcggcgacg gcgcacaccg
     4981 ccaggacgat gaggggtcgg cggatggccg agccaccctg gacgtgcacg acgggatagc
     5041 gctcgctttt ctcgctgctg cttttgtcgc tgctatagcg ctcgcttttc tcgttgctca
     5101 ggatgtccac cccagctcct cccagaggag agtcaacggc tcgtcgaagc tgtggttgct
     5161 cttgtgttgt aacaatattc cccttgaccc cggtcgaccc ggcgcggcga tgcggcattc
     5221 ttccgacagc acatagcgag gaattacgtt tctctgtgtg gcatcgggcg tttgccgagc
     5281 gcgcgcggcg caccgtaggc tcgcgcccga catgccgacc tacgccaaca ccgtgccggt
     5341 gatggagcgc catcgcttcg atgccgcctc gctcgaccgc tatctcagcg atcgcctcga
     5401 cggctatcgc ggcggcctgg cggtccggca gttcgactcc ggccattcca acccgacctt
     5461 cttcgtctcc gccgagatgg cgggcggcag gcgccaggat ttcgtgctgc gcaagaagcc
     5521 gccgggcaag ctcgtcgcct cggcgcacca ggtcgaccgc gaattccggg tgatcgcagc
     5581 gctggccgca accgacgtgc cggtggcccc ggcgcgcctg ctgtgcaccg acgacgccgt
     5641 gatcggccag atgttctatc tcatggacgc cgtccccggc cgcatcctgg tcgacgcctc
     5701 gatgcccgat cagacgccgg ccgagcgcgc ggcgattttc gattccatga acgacgtgtt
     5761 ggcacgcctg cacaaggtcg acccggtgaa agtcggcctc ggcgactacg ggcgcagcgg
     5821 ccactacatc gcccgccagg tggcgcgctg gagcaagcaa tatgccgagc tcaagaccga
     5881 ggacatcccg gcgatggaca agctcgcgac ctggctgccc gagcacattc cggcggagga
     5941 tcccaccacc atcgtgcacg gcgactatcg cctgggcaat ttgatcgtgc atcccagcga
     6001 gccgcgcatc gtggcggtgc tcgactggga gctctcgacc ctcggccatc cgctttgcga
     6061 catcgcctac aattgcctgg gctaccacct ccccgagccg ccgcacggct ttgccaaggt
     6121 cgacttcaag aagctcggcc tgccgaccga gaacgactat gtcgccgcct actgccggcg
     6181 caccgggcgc gacgccatcg cgcactggaa ctactacctc gccttttcgc tgttccggct
     6241 ggccgccatc gcccagggcg tctatcgccg cggcctgcag ggcaattcgt ccaaccccga
     6301 ttccataaag atgagcaagt cggcgcgcga acgggccgag ctcgcctgga gtttggtgag
     6361 ctgaggccac tgtcatcccg agcgcagcga ggcccccacc ctgccttccc cgcttcgcgg
     6421 gggaggtggc ccgaagggcc ggagggggtc ctcgccttcg gaagcgcgcg tggcccgcga
     6481 cttcacgcgc tggaagtcga tcctcgattc gttaggctat aagccggcgc agtaaccgag
     6541 aacgaggagc ccgccatgcc gactttccag catgccgacg ccgagatcca ttacgaggtg
     6601 cacggcaacg gctttcccct gttgctttat gcgccgggcg ggctgcgctc ccagctcgac
     6661 tactggaagg ccagccccgc cgatcccaac cagccggcac cctggatgaa ccccatgcag
     6721 gcgctcgccg accgcttcac cgtggtcggc atggaccagc gcaacgccgg caagtcgcgc
     6781 gccggccttg cgtctgacca tggctggcac acctatgccg aggaccattt cgcactgatg
     6841 gaccatctcg gcttcaagca gttcgccgtc atgggcggct gcattggcgg cagcttctgc
     6901 ttcgaggcga tcgagcacga tcccccgcgc atcgccgccg ccgtgctgca gaacccgatc
     6961 ggcctgtggg agaaccgcga cacctgggac gccgcgatca agggttttag cgagaccatg
     7021 cgcgcccgcg atccgtcgat cacgcagcag acggtcgact ccttcggccg caacatgttc
     7081 ggctcggact tcgtgttctc cgtcacccgc gacttcgtca agaattgccg cacgccgctt
     7141 ctgctgcagc ccggcatcga caagccgcat cccgctgaga ccagcgcgga gatcgcggca
     7201 ctggcgccca acattgaggt ccagaaggac tggcgcgggc cgcagttcct gaacgagtcg
     7261 attcggcgcg tgcgcgcctt cctcgacaag aacaccccca agtgagcatg cgccggcttg
     7321 cgttcgcggc gatcctcgtc agcgctgtcg tccccgccgc ccaggcgcag gagacctggg
     7381 tcgccgtggc acgctggcca atccgcgcga gaacgacctg ttgatgcagg tccgcagcag
     7441 ctgcgccgcc acccgcgcca gcgccgccgc gaagccaacc ccggcgccgc aacagcagca
     7501 ggccgttgca ccgccgccgc cgccggcgcc cgatcccaac ctgttcacga cctgcggcgc
     7561 ggccgaccgc cagggcgtgc ggacctgcta cgaggtgccg ccgtccggtc ttgcctgccg
     7621 caagctcctg cagcagggcg gcgagcgcat gtggtcgcag gatatggcga cctgcgacag
     7681 cactgacgtg ctgcagcagc gcaacgccta tttcgccaac ctgaaggcgc cgtcgccgcg
     7741 ccaggagttc ggcgccgatg ccggccgcaa gcaggacgca ctggcgaaac tctcgccgca
     7801 atgccgcgct cggctcaacg gcctgctgca gggcgccgac agcggcgaca aggaaaaagc
     7861 ctatacggcc tatggcgggc tgcgcgcgca atgcgacgcc gagatgaagg cgttggcgag
     7921 cgccgccgag gtcgacctgc ccgaacgcat cccgagctca cgggcacgca cggcgatgga
     7981 caaggcgatg agcggcgatc ccgaccgcat ggcccaggcg accgccgatc gcggttacga
     8041 tgccccctac gacatgggtg aggtgatcga tttcgggctg agcctgatca acctcttgag
     8101 cggcttcgcc ggcgtttacg cgcccatgcc gggcggtgcc gccgcgagct acagcggcgg
     8161 caatttccat cgccgcgttt acggtcaagg cgccccctac acccccgccc cgcgttatga
     8221 gcccagcacg atcacgggaa cgaagaagta gcttgaggga cgcgccgtcg atgcccacgt
     8281 aagcagcctc gtcggtcgat ccagggcgtt acgtggaaaa actgggcgtt atcatcggca
     8341 tcgcggtcgc ggtggccatc gtgatcttcc tgcgtgaccg ccacgccgcc caggggcagc
     8401 ggctgcgcgc ggcggcgatc ggcctggtcg tggcaggcgt cgccgccgcc gcggcggt
//
LOCUS       DASWGA010000419         2116 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1060512, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000419 DASWGA010000000
VERSION     DASWGA010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1060512"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1089
                     /gene="murA"
                     /locus_tag="VF991_10065"
     CDS             <1..1089
                     /gene="murA"
                     /locus_tag="VF991_10065"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEX9556829.1"
                     /translation="SAPGENGHAHGTTLTLQAGKIASTTAPYDIVRKMRASVLVLGAL
                     LAREGQARVSLPGGCAIGARPVDLHIAGLKAMGAKIDVDGGYLVAKAPKGLKGARFTF
                     PKVSVGATENLMMAAALAKGTTVLDNAAREPEITDLAQCLVSMGVPVGGIGTETLTIQ
                     GVEHLKETTHRVIPDRIETGTYAMAVAMTAGDVELLGGRLDLIETAAQSLRAAGVTLE
                     QTERGLRVQRTNGALRGVDVMTEPYPGFPTDLQAQMMALMTRAEGASMITETVFESRF
                     MHVPELSRMGANVTIHHESALVRGVPKLRGAEVMATDLRASVSLAIAALAAEGDTTVN
                     RVYHLDRGYERLEEKLAACGADIERVKN"
     gene            1095..1532
                     /locus_tag="VF991_10070"
     CDS             1095..1532
                     /locus_tag="VF991_10070"
                     /inference="COORDINATES: protein motif:HMM:NF022612.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2948 family protein"
                     /protein_id="HEX9556830.1"
                     /translation="MPEQLKLTALDADDLGVISAACQDALVAVRDCAYFKDEKRFVLL
                     LNRFRWEADPTVEAAYSRTHSALVFNEVTAVRHHEIPLDEPDRMLELLVLVLDYRGDG
                     ERSVTLRFAAGRAIRLEIARLACHLGDVGEPWATPWKPAHPVE"
     gene            1576..>2116
                     /gene="hisG"
                     /locus_tag="VF991_10075"
     CDS             1576..>2116
                     /gene="hisG"
                     /locus_tag="VF991_10075"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEX9556831.1"
                     /translation="MSQVNEKLILALPKGRILNEAAPLFARAGIEPERAFADPEARQL
                     RFTTNHDDLDIIRVRSFDVATFVAFGAAHLGIAGADVLMEFDYPEIYAPVDLGIGKCR
                     LAVAEPAEMAGSDDPRRWSHVRIATKYPEVTRRHFAARGVQAECVKLSGAMELAPSLG
                     LSHRIVDLVDSGRTLKENGL"
BASE COUNT          340 a          740 c          711 g          325 t
ORIGIN      
        1 tcggcgccgg gcgagaacgg ccacgcccac ggcacgaccc tcaccctgca ggccggcaag
       61 atcgcctcga ccacggcgcc ctacgacatc gtgcgcaaga tgcgcgcttc ggtgctggtg
      121 ctgggcgcct tgctggcgcg cgaaggccag gcgcgcgtgt cgctgcccgg cggctgcgcc
      181 atcggcgcgc ggccggtcga cctccacatc gctggcctga aggcgatggg cgccaagatc
      241 gatgtcgacg gcggctatct ggtggcgaag gcgcccaagg gactgaaggg cgcgcgcttc
      301 accttcccca aggtttcggt cggcgcgacc gagaacttga tgatggcggc ggcgctggcc
      361 aagggcacga cggtgctcga caacgccgcg cgcgagcccg agatcaccga cctcgcccaa
      421 tgcctcgtct cgatgggcgt gccggtcggc ggcatcggca ccgagacgct caccatccag
      481 ggtgtcgagc acctcaagga gacgacgcac cgggtgatcc ccgaccgcat cgagaccggc
      541 acctacgcca tggcggtggc gatgacggca ggcgatgtcg aacttttggg cggccggctc
      601 gatctgatcg agacggcggc gcagagcctg cgcgcagccg gcgtcaccct ggagcagacc
      661 gagcgcggcc tgcgcgtgca gcggaccaac ggcgccctgc gcggcgtcga cgtgatgacc
      721 gagccttatc ccggcttccc gaccgacctg caggcccaga tgatggcgct gatgacgcgc
      781 gccgagggcg cctcgatgat caccgagacg gtgttcgaaa gccgcttcat gcatgtgccc
      841 gaactgtcgc gcatgggcgc caacgtcacc atccatcacg aatcggcgct ggtgcgcggc
      901 gtgcccaagc tgcgcggcgc cgaagtgatg gcgaccgacc tgcgcgcctc ggtgtcgctc
      961 gccatcgccg ctctcgcggc cgaaggcgac accacggtga accgcgtcta tcacctcgac
     1021 cgcggctacg agcggctcga ggaaaagctc gccgcctgcg gcgccgacat cgaacgcgtg
     1081 aaaaactgaa ccccgtgccg gaacagctga aactgacggc gctcgacgcc gacgatctcg
     1141 gcgtgatctc ggcggcctgc caggacgccc tggtggcggt gcgcgactgc gcctacttca
     1201 aggacgagaa gcgcttcgtt ctgcttttga accggttccg ctgggaggcc gatccgaccg
     1261 tcgaggcggc ctattcacgg acccattccg cccttgtttt caacgaggtg acggcggtcc
     1321 gccatcacga gatcccgctc gacgagcccg accgcatgct cgaattgctg gtgctcgtcc
     1381 tcgactaccg cggcgacggc gagcgttcgg ttacgctgcg gttcgccgca ggccgcgcca
     1441 tccggctgga aatcgctcgt cttgcatgcc atttggggga cgtcggggag ccctgggcga
     1501 ccccgtggaa gcccgcccat ccggtcgaat agcctgtcga ccagcggcgg gcattcgttg
     1561 ttggagcaaa gggtcgtgtc gcaagtcaac gaaaagctca ttctggcgct gcccaaggga
     1621 cgcatcctca acgaggcggc gccgctgttc gcgcgcgccg gcatcgagcc cgagcgcgcc
     1681 ttcgccgatc ccgaggcgcg gcagctgcgt ttcaccacca atcacgacga tctcgacatc
     1741 atccgcgtgc gctccttcga tgtggcgact ttcgtggcct tcggcgcggc acatctcggc
     1801 atcgccggcg ccgacgtgct gatggagttc gactatcccg agatctatgc gccggtcgac
     1861 ctcggcatcg gcaagtgccg gctggccgtc gccgagcccg ccgagatggc gggcagcgac
     1921 gatccgcgcc gctggagcca cgtccgcatc gccaccaagt atcccgaggt gacgcgccgc
     1981 catttcgccg cgcgtggcgt gcaggccgag tgcgtaaagc tgtcgggcgc catggagctg
     2041 gcgccgtcgc tcggcctcag ccaccgcatc gtcgatctcg tcgattcggg ccgcacgctc
     2101 aaggaaaacg gcctgg
//
LOCUS       DASWGA010000420         3859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2459033, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000420 DASWGA010000000
VERSION     DASWGA010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2459033"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..427)
                     /gene="folE"
                     /locus_tag="VF991_10080"
     CDS             complement(<1..427)
                     /gene="folE"
                     /locus_tag="VF991_10080"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HEX9556832.1"
                     /translation="MDRILKKSDVVSLATGLTRPSREEAEAAVRTLIRWAGDDPDREG
                     LLGTPDRVVRSYEEFFGGYDDDPREMLQRTFEEVEGYDEVVVLRDIRLESHCEHHMVP
                     IIGKVHIGYLPDRRVVGISKLARVVDAYAYRLQIQEKLTA"
     gene            complement(438..830)
                     /gene="apaG"
                     /locus_tag="VF991_10085"
     CDS             complement(438..830)
                     /gene="apaG"
                     /locus_tag="VF991_10085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015689150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HEX9556833.1"
                     /translation="MYTATTRAIKVTVRPQYLPDQSDPAKSQFVWAYQVRIENTGDVT
                     VQLRSRHWKITDALGRQQEVKGPGVVGETPMLRPGEVFEYTSGTPLATPSGFMSGTYQ
                     MVSESGENFDIEIPTFSLDTPGAKRRLN"
     gene            complement(897..1775)
                     /locus_tag="VF991_10090"
     CDS             complement(897..1775)
                     /locus_tag="VF991_10090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019996176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX9556834.1"
                     /translation="MKLSIGVTVIVSLFGVAFGLLSGSLSIVFDGVFAAIDAAMSALA
                     LVVSRLVSREADNRRFQFGYWHIEPMVLALNGGTLMLLCFYAFLNAVDSFLAGGRQLD
                     FDWAIAYAITVCVVCFGMFFYEVRANRRIGSDFLRLDAQSWLMSAAITSALLVAFAIA
                     WSLKGTRFGNLTPYADPVVLALLTLGLVFVPIRTVRKALREILLITPPELDAHVRSVM
                     DAVVARHGFKTYTSYVAKVGRAQFIEIHIAVPTGMRLDNVATVDAIRREIAEAIGGEG
                     PQRWLTIDFTADPRWL"
     gene            complement(1953..2426)
                     /locus_tag="VF991_10095"
     CDS             complement(1953..2426)
                     /locus_tag="VF991_10095"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9556835.1"
                     /translation="MEADAGFGVVPLEQVRALDGLDLFKGLMEGRFPAPPIAKVLGFQ
                     VAEVERGRVVFTYTPVFDHYNPLGTVHGGVAATLLDSVMGCCVHTTLKAGIGYTTVEI
                     KVNYVRAMTDKTGPVRVEGKVITVGSRIATAEGRLHDNEGRLLAHGTTTCLIFPI"
     gene            2587..2958
                     /locus_tag="VF991_10100"
     CDS             2587..2958
                     /locus_tag="VF991_10100"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEX9556836.1"
                     /translation="MTQIYSRHLAPTGLKISQFSLLGFVCSEGPITIGRLSELLATDR
                     TTLTRNLRPLLHGGVIERAVSGDKRRRELVATPAGRALFKRALPLWSAAEQEVRAAMG
                     VRLTADLHGSLDRSMEKLAAL"
     gene            complement(3085..3696)
                     /locus_tag="VF991_10105"
     CDS             complement(3085..3696)
                     /locus_tag="VF991_10105"
                     /inference="COORDINATES: protein motif:HMM:NF015057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TenA family protein"
                     /protein_id="HEX9556837.1"
                     /translation="MSLAKSLWEANADWAERILAHGFVRGLADGSLPIDSFKGYVAQD
                     AYFLEAFARAYGFCLAYSSEREDLKNFADLIAGVREELELHNSYARRWQVELAGVRPI
                     AATSAYTGFLLDTAELGELGATIAAMTPCMRLYAFLGRSLAAGKVAPLYEEWIRTYAD
                     PSFETLAARLEALLDRHANDSAPVRANYRRAMELEYGFFDANV"
     gene            complement(3717..>3859)
                     /locus_tag="VF991_10110"
     CDS             complement(3717..>3859)
                     /locus_tag="VF991_10110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEX9556838.1"
                     /translation="PATTTHMRIGAEERAKLGINDGTVRVSVGLEDVEDIIADLVQAL
                     GG"
BASE COUNT          667 a         1273 c         1273 g          646 t
ORIGIN      
        1 gggccgtgag cttctcctgg atctgcaggc ggtaggcgta ggcatcgacc acgcgggcga
       61 gcttgctgat gccgaccacg cgccggtcgg gcaggtagcc gatatggacc ttgccgatga
      121 tcggcaccat gtggtgttcg cagtgcgact ccagccgaat gtcgcgcagt accacgacct
      181 cgtcgtagcc ctcgacctcc tcgaaggtcc gctgcagcat ctcgcgtgga tcgtcgtcgt
      241 agccgccgaa gaattcctca taggaacgca ccacgcggtc gggcgtgccc aaaagcccct
      301 cacggtcggg atcgtcgccc gcccagcgga tcagcgtgcg caccgcggcc tccgcctcct
      361 cgcgcgaggg gcgcgtaaga ccggtggcga gcgacaccac gtcgctcttt ttcagtatcc
      421 tatccatgat cgttccttca attgagccgc cgcttggcgc cgggcgtgtc gagtgaaaaa
      481 gtcgggatct cgatatcgaa gttttcgccc gattcgctca ccatttgata ggtgccgctc
      541 atgaagccgg agggcgtggc gagcggcgtg ccggaagtgt actcgaacac ttcgcccgga
      601 cgcagcatcg gagtctcgcc gaccacgccg ggtcccttga cctcctgctg gcggccgagt
      661 gcgtcggtga tcttccaatg acggctgcgc aactgcaccg tgacatcgcc cgtgttctcg
      721 atgcggacct ggtaggccca gacgaactgg gatttcgccg ggtcggactg gtcaggcaga
      781 tattgcggcc ggacggtgac cttaatggca cgggttgtgg ctgtgtacat gacgactgtc
      841 cctgaagctc agacatggga tcttcccgcc aaaaggtcaa ataggtccag tgcaggctaa
      901 agccacctcg ggtcggcggt gaaatcgatg gtgagccagc gctgcgggcc ttcaccgccg
      961 atcgcctcgg cgatttcgcg gcggatggca tcgacggtgg cgacgttgtc gagccgcatg
     1021 ccggtcggaa ccgcaatgtg gatctcgatg aactgcgctc gcccgacctt ggcgacgtag
     1081 ctggtgtagg tcttgaagcc gtggcgggcg acgacggcgt ccatgacgct cctgacatgg
     1141 gcgtcgagct cgggcggcgt gatcagcagg atctcgcgca gcgccttgcg caccgtacgg
     1201 atcggcacga acaccaggcc gagcgtcagg agcgccagca cgaccggatc ggcgtagggc
     1261 gtgaggttgc cgaagcgcgt gcctttcaag gaccaggcga tggcgaaggc gaccagcagc
     1321 gccgaggtga tcgccgccga catcagccag ctctgcgcgt cgagccgcag gaagtccgag
     1381 ccgatgcgcc ggttggcccg gacctcgtag aagaacatgc cgaagcagac gacacagacc
     1441 gtgatcgcat aggcgatcgc ccagtcgaaa tcgagctggc ggccgcccgc caggaagctg
     1501 tcgacggcgt tcaggaaggc gtagaagcag agcagcatca gggtgccgcc gttgagggcc
     1561 agcaccatgg gctcgatgtg ccaatagccg aactggaagc gccggttgtc ggcctcgcgg
     1621 ctgaccagcc gcgagacgac cagcgcgaga gccgacatcg ccgcgtcgat cgcggcaaac
     1681 accccgtcga acacgatcga cagcgagccc gacagcaggc cgaatgcgac gccgaacagc
     1741 gagacgatca cggtcacgcc gatcgacagc ttcaatatcc tttgttccgc ggccgcctga
     1801 agcatgccgc aggctagcgc aattcgcgtc gtactcctct cccccgttag ggggagaggc
     1861 tgggtgaggg ggttaaacga agcgcatgac acctcaccct ccccgccctc tcccccgctt
     1921 cgcggcggag agggcttctg catgaatgcg acctagatcg gaaagatcag gcaggtcgtc
     1981 gtgccgtgcg ccagcagcct gccctcgttg tcatggagcc tgccctccgc ggtggcgatg
     2041 cgcgagccga cagtgatcac cttgccctcg acccggaccg ggccagtctt gtcggtcatg
     2101 gcgcgcacgt agttcacctt gatctcaacc gtggtgtagc cgatgccggc cttgagcgtg
     2161 gtgtggacgc agcatcccat caccgaatcg agcaaggtgg cggcgacgcc gccatgcacg
     2221 gtgcccagcg gattgtagtg gtcgaagacc ggcgtgtagg tgaacacgac gcggccccgc
     2281 tcgacctccg ccacctggaa gcccagcacc ttggcgatcg gcggcgccgg gaagcggccc
     2341 tccatcaggc ccttgaacaa gtccagcccg tccagggcgc gaacctgttc cagcggcacc
     2401 acgccaaagc ccgcgtcagc ttccattgcc atctccatac catctccgtg cgatttacgt
     2461 gcatatacac attggagctt tgccggcgca agcgatggcg gtaatctcgc catcatgtcc
     2521 ggccagccgc tccgtctctc gcctgccgaa tgcacgtgct ttcgcattcg cggcgcagcg
     2581 cggcgggtga cgcagatcta cagccgacac ctggcgccga ccggcctgaa aatctcgcaa
     2641 ttctcgctgc tcggcttcgt ctgttcggaa ggcccgatca ccatcggccg cctgtccgag
     2701 ctgctggcaa ccgaccgcac gacgctgacg cgcaacctgc gccccctgct gcacggcggc
     2761 gtcatcgagc gcgccgtatc gggcgacaag cgccggcgcg agctggtggc gacgccggcc
     2821 ggccgcgctt tgttcaagcg cgccctgccg ctgtggtcgg cggccgagca ggaggtgcgc
     2881 gcggcgatgg gcgtgcggct caccgccgac ctgcacggct ccctcgaccg ctcgatggaa
     2941 aagctcgcgg cgctctgacc taggctccgc ccttctgtca tcgcgcgcgg ggtaatcccc
     3001 gcgctggagc gaagcgaagg atctcatgcc cgtggcaaat ggcgatgagg tccttcgttt
     3061 cgctcaggac gacaggaaaa gccctcagac gttggcgtcg aagaagccgt attcgagttc
     3121 catggcgcgg cggtagttgg cgcgcaccgg cgcgctgtcg ttggcgtgcc ggtcgagcaa
     3181 ggcctccagc cgtgcggcca gcgtctcgaa gctgggatcg gcgtaggtcc ggatccattc
     3241 ctcgtagagc ggcgccacct tgccggcggc aagcgagcgg ccgaggaaag cgtagaggcg
     3301 catgcagggc gtcatggcag cgatcgtcgc gccgagctcg ccgagctcgg cggtgtcgag
     3361 cagaaagccc gtataggcgc tggtcgccgc gatcggcctg acgccggcca actcgacctg
     3421 ccagcgtcgg gcgtagctgt tgtgcagctc gagctcctcg cgcacccccg cgatcaggtc
     3481 ggcgaagttt ttgaggtcct cgcgctcgct gctgtaggcc aggcaaaaac cataggcgcg
     3541 ggcgaaggct tcgaggaaat aggcatcctg cgccacgtag cccttgaagc tgtcgatcgg
     3601 cagcgaaccg tcagccaggc cgcgcacgaa gccgtgcgcc aggatgcgct ccgcccagtc
     3661 ggcgttggcc tcccacaggc tcttggccag cgacatttca gcgtcagccg ccgcttctag
     3721 ccaccgagcg cctggaccag gtcggcgatg atgtcctcga cgtcctcgag gccgaccgag
     3781 acgcgcaccg tgccgtcgtt gatgccgagc ttggcgcgct cctcggcgcc gatgcgcatg
     3841 tgggtggtgg tcgccggat
//
LOCUS       DASWGA010000421         1868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2078277, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000421 DASWGA010000000
VERSION     DASWGA010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2078277"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..795)
                     /locus_tag="VF991_10115"
     CDS             complement(106..795)
                     /locus_tag="VF991_10115"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX9556839.1"
                     /translation="MSYRAVLFDVGGPLDLEFAWEIAVDGAIASACGLEGIRVDPAMI
                     DEASEAAVAAFAPDAYAHMVETLCGSDPQAIERVRQRVRAMTGSLDVFQLRPEIDGLL
                     RRLRDRGLRLGIVANQPQTARERLARAGIGDLFDYQGLSGFTGLRKPDPRAFQAAAEA
                     LAVRPAACIMVGDRIDNDIAPAKALGMAAILFRSGRHRRQRPRTSAEEPDAVVTDVLG
                     LEEAILTLLSQ"
     gene            complement(820..1293)
                     /locus_tag="VF991_10120"
     CDS             complement(820..1293)
                     /locus_tag="VF991_10120"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9556840.1"
                     /translation="MDVSIAREEDPAANRRILETLTARLPEWFAQGESNRHYAEQAEI
                     LEAWVARIDGRAGGLLLIKRHSPVSAEVYWLGVDPDHHRQGIGRALIGAVERQLRKEK
                     IKFLFVMTLHPEDPYEPYRRTRLFYERMGFELALSSGQALATSSSDPLAYYLKPL"
     gene            complement(1302..>1868)
                     /locus_tag="VF991_10125"
     CDS             complement(1302..>1868)
                     /locus_tag="VF991_10125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEX9556841.1"
                     /translation="AGAAHAKSDKPVKAGSAEDAAFLMKNAQSVIIVPGYGMAVAQAQ
                     HTLREMVDILKKDGVQVRYAIHPVAGRMPGHMNVLLAEANVPYDEVFELDDINRDFAS
                     TDVAFVIGANDVTNPAAKTDPTSPIYGMPILDVEKAHTVLFVKRGMASGYAGVDNELF
                     FRDNTMMLFADAKVMCENIVKALEGSAH"
BASE COUNT          318 a          607 c          618 g          325 t
ORIGIN      
        1 ggcgaagaag ctctacctgc agctggaaaa ggtcgtcggt accttctgtc ccggcctcgc
       61 caaggagccg ctgcacatcc atcgctacgg cgccagccag cacgctcact gactgagtag
      121 cgtgaggatc gcctcttcca gccccagcac gtcggtcacg acggcgtccg gctcctcggc
      181 cgacgtgcgc ggacgctggc ggcgatggcg gccgcttcgg aacaggatgg ccgccatgcc
      241 gagcgccttg gcgggtgcga tgtcgttgtc gatgcgatcg cccaccatga tgcaggccgc
      301 cggacggacg gctagagcct cggccgcggc ctggaaagcg cgtgggtcgg gcttgcgcaa
      361 gccggtgaac ccgctcaggc cctgataatc gaagagatcg ccgatgccgg cgcgggccag
      421 ccgttcgcgc gcggtttgcg gctggttggc gacgatgccg agcctaaggc cgcggtcgcg
      481 taagcggcgc aatagcccgt cgatctcggg gcggagctgg aagacgtcga gactgccggt
      541 catggcgcga acgcgctggc gcacgcgctc gatggcctgc ggatcgctgc cgcacaacgt
      601 ctcgaccatg tgggcatagg catcgggcgc gaaggccgcg accgcggcct ccgacgcctc
      661 gtcgatcatc gccggatcga cgcggatgcc ctccagcccg caggccgagg cgatggcgcc
      721 gtcgaccgcg atctcccagg cgaattccag gtcgagtgga ccaccgacgt cgaagagaac
      781 cgcgcgatac gacatctccc ctccttcgcc gagcatcggc tacagaggtt tgagatagta
      841 ggcaagcgga tcggacgatg acgtagcaag agcctggccg gacgacagcg ccaactcaaa
      901 tcccatccgc tcgtagaaaa gccgcgtgcg ccggtaaggc tcataagggt cttcgggatg
      961 gagcgtcatg acgaagagaa acttgatctt ctctttcctc aactggcgct cgacggcgcc
     1021 gatcaaggcc cgtccaattc cctgccggtg atgatccggg tcgacaccaa gccagtagac
     1081 ttccgcgctg acggggctgt gccttttgat cagcagcaag ccgcccgctc gtccgtcaat
     1141 gcgcgcaacc caagcttcca ggatctctgc ctgctcggcg tagtgccggt tggattcgcc
     1201 ttgggcgaac cattccggga ggcgcgccgt caacgtttcc agaatccggc gattggccgc
     1261 cgggtcttct tcccgggcaa tggaaacgtc catgccgcag tctagtgcgc cgaaccttcc
     1321 agcgccttga cgatgttctc gcacatcacc ttggcgtcgg cgaacagcat catggtgttg
     1381 tcgcggaaga acagctcgtt gtcgacgccg gcatagcccg aggccatgcc gcgcttgacg
     1441 aacagcacag tgtgcgcctt ctcgacgtcg aggatgggca tgccgtagat cgggctggtc
     1501 ggatcggtct tggctgcggg attggtgacg tcgttggcgc cgatcacgaa ggccacgtcg
     1561 gtcgaggcga agtcgcggtt gatgtcgtcg agctcgaaga cctcgtcgta gggcacgttg
     1621 gcctcggcca aaagcacgtt catgtggccc ggcatgcggc cggccacggg atggatggcg
     1681 tagcgcacct gcacgccgtc cttcttcagg atgtcgacca tctcgcgcag cgtgtgctgg
     1741 gcctgcgcca ccgccatgcc gtagcccggc acgatgatca ccgactgggc gttcttcatc
     1801 aggaaggccg catcctcggc tgagccggcc ttgaccggct tgtcgctctt ggcgtgcgcg
     1861 gcgccggc
//
LOCUS       DASWGA010000422         1617 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_176599, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000422 DASWGA010000000
VERSION     DASWGA010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176599"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1264)
                     /locus_tag="VF991_10130"
     CDS             complement(<1..1264)
                     /locus_tag="VF991_10130"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9556842.1"
                     /translation="MIVVGAGMAGLVAARLLHDSGFVVTVLEARDRLGGRTWTDDSLG
                     APLDLGGSWVHGVAGNPLTLWCEKVGVALIESQGDRLLIDQRATAPTREGQRRRAVLG
                     RAAFKAAIEWASWKSRAMARSWGPASISVKQAVDPLLHAAWLPEVDKLVIATFIEMSE
                     GVQGAPYEAISVEEWFPLQGLERNAQPKGGFLPLIDDAARGLSIRLSAPVQRIVWSES
                     GVSAILKDGERVEADRALIAVPVGLLRAGLPALDPLPPEDQRTALGRLGYGAGVLGKI
                     YLRFPRRFWPERPKWFGRLPDAPDRRGTFNTWVSHEQETGRPILLSFCNGATAARLDC
                     SASDAEVKDLAMASLRKMFGADIPEPEAMLYPRWLSDPWSRGGYSYPAVGSAAEDRPI
                     HARPLGRRVYFAGEATEPVEYGTVHGALW"
     gene            complement(1303..>1617)
                     /locus_tag="VF991_10135"
     CDS             complement(1303..>1617)
                     /locus_tag="VF991_10135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006325152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX9556843.1"
                     /translation="EKMRFTLGLTGLWDLFDGRIFSASQVPRGKPFPDLFLHAAIGMN
                     VQPFECTVVEDSVPGIQAARSAGMRALAYAGAPYADRAGLAAAGGELFDDMTTLPGLV
                     LR"
BASE COUNT          266 a          586 c          547 g          218 t
ORIGIN      
        1 accatagagc gccatgcacc gtgccatatt cgacaggctc ggtcgcctcg ccggcgaagt
       61 agacgcgccg accgagcggc cgggcgtgga tcggccgatc ctccgccgcg ctgccgaccg
      121 ccggatagga atagccgccg cgcgaccacg gatcgctcag ccagcgcggg tagagcatcg
      181 cctccggctc ggggatgtcg gcgccgaaca tcttgcgcag cgacgccatc gccaggtctt
      241 tgacttcggc atcgctggcg ctgcagtcga ggcgggcggc ggtggcgccg ttgcagaagc
      301 tgagcaggat gggccgcccg gtctcctgct cgtgactgac ccaggtgttg aaggtgccgc
      361 ggcggtccgg cgcatcgggc aggcgaccga accatttcgg gcgctccggc cagaagcgcc
      421 gcggaaaacg caggtaaatc ttgcccagca cccccgcacc gtagcccagt cggccgagcg
      481 ccgtgcgctg gtcctccggc ggcagcggat cgagcgccgg caggccggcg cgcaacaggc
      541 cgaccggcac ggcgatcaag gcccggtcgg cctcgacccg ctcgccgtcc ttcaagatcg
      601 cgctcacgcc cgactcgctc cagacaatgc gctgcacggg ggcgctcaag cgaatcgaaa
      661 gcccgcgcgc ggcatcgtcg atcagcggca ggaagccgcc tttgggctgg gcgttgcgtt
      721 cgagtccctg caaaggaaac cactcctcga ccgagatcgc ctcgtaaggc gcgccctgca
      781 cgccttcgct catttcgatg aaagtcgcga tcaccagctt gtcgacctcg ggcagccagg
      841 cggcatggag cagcggatcg accgcctgct tcaccgagat cgaggccggc ccccagctgc
      901 gggccatcgc ccggcttttc cagctcgccc attcgatcgc cgccttgaag gcggcgcggc
      961 cgagcacggc gcggcggcgc tggccctcgc gcgtcggcgc ggtggcgcgc tggtcgatca
     1021 acagccggtc gccttgcgat tcgatgagcg cgacaccgac cttctcgcac cacagggtca
     1081 gcgggttgcc ggcgacgcca tgcacccacg aaccgccgag atcgagcggt gcgccgagcg
     1141 aatcgtcggt ccaggtgcgg ccgcccaggc gatcgcgcgc ctccagcacc gtgacgacaa
     1201 atccggagtc gtgcagcagg cgcgcggcga ccaggcccgc catgccggcg ccgaccacga
     1261 tcacgcgctc aggcctagcg ctccccatgg accacgagcc ggtcatcgca gcaccaggcc
     1321 gggcaacgtc gtcatgtcgt cgaacaactc gccgcccgcc gccgccaagc cggcgcggtc
     1381 ggcataaggc gcgccggcat aggccagcgc acgcatgccg gcggagcgcg ccgcctggat
     1441 gccgggtacg gagtcctcga cgacggtgca ttcgaacggc tgcacgttca tgccaatggc
     1501 agcgtggagg aagagatcgg ggaacggttt tccacgcggc acctggctcg cgctgaagat
     1561 gcggccgtcg aacaggtccc acagcccggt cagtcccagc gtgaagcgca tcttctc
//
LOCUS       DASWGA010000423         2676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_176707, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000423 DASWGA010000000
VERSION     DASWGA010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176707"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..750
                     /locus_tag="VF991_10140"
     CDS             <1..750
                     /locus_tag="VF991_10140"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX9556844.1"
                     /translation="RKGNVALIHLTGFNSATTDTLTHALDRARLEIGRDLQGVILDMR
                     SNRGGLLDQAQSVSEVFIGDGVIFSTQGRHPDSRRVYKTSGHKAADMPIVVLMNGGSA
                     SAAEIVAAALQDRGRALIVGTTSYGKGTVQTVVRLSNEGELILTWSRLQAPSGYTWNE
                     LGVLPNICTSKVADADQLGPNSLDSSQGTLMRWHALRNPTHQEVTDLRKICPPGDNSP
                     ERDVDVATRLLHEPGLYAHAVQAATQQAASQ"
     gene            838..1005
                     /gene="rpmG"
                     /locus_tag="VF991_10145"
     CDS             838..1005
                     /gene="rpmG"
                     /locus_tag="VF991_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010233410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEX9556845.1"
                     /translation="MAKPTSILIKMISSADTGFFYVTKKNPRTKTEKLELKKYDPVAR
                     KHVVFKESKIK"
     gene            1100..2599
                     /locus_tag="VF991_10150"
     CDS             1100..2599
                     /locus_tag="VF991_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017277507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEX9556846.1"
                     /translation="MSAQLSRDDWKSRIGGLSYRNQAFIGGKFAPSLTGKTFDCINPA
                     TGQVLTKVAACEQADVDAAVKAARAAFDKGTWANMPPAQRKRVMLKLAELMMKNREEL
                     ALLETLDMGKPIAFSTTVDIPGSANTVQWFAEAIDKIYDEVAPTPGNVVALITREPAG
                     VVAAVVPWNFPLLMACWKISPALAAGNSVILKPAEQSPLTAIRLAELAAEAGIPEGVF
                     NVLPGFGETAGQALGRHMDVDVIAFTGSTEVGKYFLRYSGESNMKQVWLECGGKSPNI
                     VLADAPNLDIAARRTAFGIWFNQGEVCTAGSRLIVEDKIKDSFLEKVMAIGQKMMPGD
                     PLDPKTQMGAMVDETQTKRVMGYIEAGQKEGATLRMGGKQVHVDNAGSFIEPTVFDGV
                     DNKMKIAQEEIFGPVLSVIPVKDAEQALSVANDTIYGLASAIFTSDINKAFKFAKGLR
                     AGSVWVNTYDGGDITTPFGGYKQSGNGRDKSLHAFDKFTQVKTTWIQLG"
BASE COUNT          506 a          934 c          828 g          408 t
ORIGIN      
        1 cgcaagggca atgtcgcgct gatccacctc accggcttca acagcgccac caccgacacg
       61 ctgacccatg cgctcgacag ggcgcggctc gagatcggcc gcgaccttca gggcgtcatc
      121 ctcgacatgc gctcgaaccg cggcggcctg ctcgaccagg cccagtcggt ctccgaggtg
      181 ttcatcggcg acggcgtgat cttctcgacc cagggccgcc atcccgacag ccgccgtgtc
      241 tacaagacca gcggccacaa ggccgccgac atgccgatcg tcgtgctgat gaacggcggc
      301 tcggcgtcgg ccgccgagat cgtggcggcg gcgcttcagg atcgcggccg cgctctgatc
      361 gtcggcacca cgagctacgg caagggcacg gtgcaaaccg tggtgcgact gtccaacgaa
      421 ggcgagctga tcctgacctg gtcgcgcctg caggcgccat ccggctacac ctggaacgaa
      481 ttgggcgtgc tgcccaacat ctgcacctcc aaggtggccg acgctgacca gctcgggccg
      541 aattcgctcg attccagcca gggcacgctg atgcgctggc atgcgctgcg caacccgacc
      601 catcaggaag tgaccgacct gcgcaagatc tgcccgcccg gcgacaacag ccccgagcgt
      661 gacgtcgacg ttgccacccg cctgctgcac gagcccggcc tttatgccca tgccgtgcag
      721 gccgcgaccc agcaggccgc cagccaatag ccttttcagg cgcttgacac cgcccaaccg
      781 gcgactactt tgccggcctt ccgggaattc gccctttagg gcatagggac aaagaccatg
      841 gccaagccga cctcgatcct gatcaagatg atctccagcg ccgacaccgg cttcttctat
      901 gtcaccaaga agaacccgcg caccaagacc gagaagctcg aactcaagaa gtacgacccg
      961 gtggcgcgca agcacgtcgt cttcaaggaa tcgaagatca agtagtccgg ccgtttcgcg
     1021 ccgcgtcctg aaagccgccc ttccgggcgg ctttttcgtg ggctaggctc cgcgccatcc
     1081 aacaacggga gggaatcaca tgagcgccca gctttcgcgc gacgattgga agagccgcat
     1141 cggcggcctc agctaccgca accaggcctt catcggcggc aagttcgcgc cctccctcac
     1201 cggtaagacc ttcgactgca tcaacccggc gaccggccag gtgctgacca aggtcgcggc
     1261 ctgcgagcag gccgacgtcg acgccgcggt caaggccgcg cgcgccgcct tcgacaaggg
     1321 cacctgggcc aacatgccgc cggcccagcg caagcgcgtc atgctgaagc ttgccgagct
     1381 gatgatgaag aaccgcgagg agctggcgct cttagagacg ctcgacatgg gcaagcccat
     1441 cgccttctcg accacggtcg acatccccgg ctcggccaat accgtgcagt ggttcgccga
     1501 ggcgatcgac aagatctacg acgaggtggc gccgacgccg ggcaacgtcg tggccctgat
     1561 cacccgcgag cccgccggcg tggtggccgc cgtcgtgccg tggaacttcc cgctgctgat
     1621 ggcgtgctgg aagatctcgc cggcgctggc cgccggcaac tcggtgatcc tgaagcccgc
     1681 cgagcagtcg ccgctcaccg ccatccgctt ggccgagctg gccgccgagg ccggcatccc
     1741 ggagggcgtg ttcaacgtgc tgccgggctt cggcgagacc gcgggccagg cgctcggccg
     1801 ccacatggat gtcgacgtca tcgccttcac cggctcgacc gaggtcggca agtacttcct
     1861 gcgctattcc ggcgaatcca acatgaagca ggtgtggctg gagtgcggcg gcaagtcgcc
     1921 caacatcgtg ctggccgacg cgcccaacct cgacatcgcc gcccgccgca ccgccttcgg
     1981 catctggttc aaccagggcg aggtctgcac cgcgggcagc cgcctgatcg tcgaggacaa
     2041 gatcaaggat tcgttcctcg agaaggtcat ggcgatcggc cagaagatga tgccgggcga
     2101 cccgctcgac cccaagaccc agatgggcgc catggtcgac gagacgcaga ccaagcgcgt
     2161 catgggctat atcgaggccg gccagaagga aggcgcgacg ctcaggatgg gcggcaagca
     2221 ggtccatgtc gacaatgccg gcagcttcat cgagcccacc gtgttcgacg gcgtcgacaa
     2281 caagatgaag atcgcccagg aggagatctt cgggcccgtc ctctcggtca tcccggtgaa
     2341 ggatgccgag caggcgctga gcgtggccaa cgacacgatc tacgggctgg cctcggcgat
     2401 cttcacctcg gacatcaaca aggccttcaa gttcgccaag ggcctgcgcg ccggatcggt
     2461 atgggtcaat acctacgacg gtggcgacat caccacgccg ttcggcggct acaagcaatc
     2521 gggcaacggc cgggacaagt cgctgcacgc cttcgacaag ttcacccagg tcaagacgac
     2581 ctggatccag cttggctgac ccgccgtcgt cctgagcgta agcgaaggac ctcatcgccg
     2641 cttgccaccg gcatgagatc cttcgcttcg cttcag
//
LOCUS       DASWGA010000424         1830 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_930691, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000424 DASWGA010000000
VERSION     DASWGA010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_930691"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..848
                     /locus_tag="VF991_10155"
     CDS             51..848
                     /locus_tag="VF991_10155"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556847.1"
                     /translation="MADITCRFASRDERSDAYIAVANANLTIGRGEFVSVVGPTGCGK
                     STLLNVAAGLLEPSSGTVEVFGERLRAADGVNRRAGYMFQADALMPWRTGIGNVVAGL
                     EFRGVPSAQAVAQGEEWLRRVGLAGFGDRYPHQMSGGMRKRLALAQTLILSPDILLMD
                     EPFSALDVQTRQLMENELLALWAEDRKSVLFITHDLEEAIALSDRVIVLSAGPATRPI
                     GDFRVDLPRPRDVSEIRMTPAFLDLHREIWGAMKEEVLKAYARQKAI"
     gene            850..1647
                     /locus_tag="VF991_10160"
     CDS             850..1647
                     /locus_tag="VF991_10160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556848.1"
                     /translation="MRLRTLQILVLALLVVAWYVLTAPGLIPPFYFEQDNRAAFFFGE
                     PQKVFWVIVDWFASGEIFGHLAVTLLETALGFAIGSAFGLGIGLWLALSPTASAVMDP
                     YIKGFNSMPRVVLAPIFAVWFGLGIWSKVALGVTLVFFVVFFNVYQGVREVSPNLIAN
                     ARMLGASPRQLLRSIYLPSAMSWVFASLHNAVGLAFVGAVVGEYLGSARGVGYLILQA
                     EGTFDINTVFAGILVLTAFALLLDAAVGAVEHRLMTWQPRASETEKV"
BASE COUNT          251 a          616 c          624 g          339 t
ORIGIN      
        1 agaagcactc ctagtccggc gtgtcgatcg acggagcgcc ggcgcttgcg ctggccgaca
       61 tcacctgccg ctttgcctcg cgtgacgagc gaagcgacgc ctacatcgcg gtcgccaacg
      121 ccaacctgac gatcgggcgc ggcgagttcg tctccgtggt cggtccgacc ggctgcggca
      181 agtcgaccct gctgaacgtc gcggccggtc tgcttgaacc gtcgtcgggc accgtcgagg
      241 tgttcggcga gcgcctgcgg gcggccgacg gcgtcaaccg gcgcgccggc tacatgttcc
      301 aggccgacgc gctgatgccg tggcgcaccg gcatcggcaa cgtcgtcgcg ggcctcgagt
      361 ttcgtggcgt gccgtcggcc caggccgtgg cgcaaggcga ggaatggctg cgccgggtgg
      421 gcctggcagg tttcggcgat cgctacccgc accagatgtc gggcggcatg cgcaagcgcc
      481 tggcgctggc gcagaccctg atcctgagcc ccgacatcct gctgatggac gagccgttct
      541 ccgcgctcga cgtccagacg cgccagctca tggagaacga gcttttggcg ctgtgggccg
      601 aggacaggaa atcggtgctg ttcatcaccc acgacctcga ggaggcgatc gcgctctccg
      661 accgcgtgat cgtgctgtcg gcgggaccgg cgacgcggcc gatcggcgat ttcagggtcg
      721 acctgccgcg gccgcgcgac gtctcggaga tccgcatgac gcccgccttc ctcgatctcc
      781 atcgcgagat ctggggcgcc atgaaggaag aggtgctgaa ggcctacgca cgacagaagg
      841 ccatctgaca tgcgcctgcg caccctgcag atcctggtgc tcgccctgct ggtggtcgcc
      901 tggtacgtgc tgaccgcgcc cggcctgatc ccgccgttct atttcgagca ggacaaccgc
      961 gccgccttct tcttcggcga gccgcagaag gtgttctggg tgatcgtcga ctggttcgcc
     1021 tcgggcgaga tcttcggcca tctcgccgtc accctgctcg agacggcgct gggcttcgcc
     1081 atcggctcgg cgttcgggct gggcatcggt ctctggctcg cgctgtcgcc gacagcgtcg
     1141 gcggtgatgg atccctacat caagggcttc aactcgatgc ccagggtcgt gctggcgccg
     1201 atcttcgcgg tgtggttcgg cctcggcatc tggtcgaagg tggcgctcgg cgtcaccctg
     1261 gtgttcttcg tggtgttctt caacgtctac cagggcgtgc gcgaggtcag ccccaacctg
     1321 atcgccaacg cgcgcatgct gggcgcctcg ccgcggcaat tgctgcgttc gatctacctg
     1381 ccctcggcca tgagctgggt gttcgccagc ctgcacaacg cggtgggcct cgccttcgtc
     1441 ggcgccgtgg tcggcgaata tctcggctcg gcgcgcggcg tcggctatct gatcctgcag
     1501 gccgagggca cgttcgacat caacacggtg ttcgccggca tcctggtcct gacggccttc
     1561 gcgctgctgc tcgacgccgc ggtcggcgcc gtcgagcatc gtctgatgac ctggcagccg
     1621 cgcgccagcg aaaccgagaa ggtttaggca ggcggcgtca gcgcccggta aaccgcgccg
     1681 cgcgcttctc caggaagtgg gcgacacctt ccttgaagtc ggtggtctgg aacgaaagtt
     1741 ccatctcgta gttggcctgg gtggtggcct cggccagggt ctggaattcg gcctcccaga
     1801 tctggcgctt catcaccgcg accgagcgcg
//
LOCUS       DASWGA010000425         3276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1814966, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000425 DASWGA010000000
VERSION     DASWGA010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3276
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1814966"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..1822)
                     /locus_tag="VF991_10165"
     CDS             complement(11..1822)
                     /locus_tag="VF991_10165"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEX9556849.1"
                     /translation="MAKTVRVGCHSGFWGDTETAAVQLVRHGAVDYLVSDYLAEVTMS
                     IMATQKLKNPQAGYATDFVSVVMAPLAREIAEKKIKVITNAGGVNPQACRDAVLKACE
                     AAGVKLKVAVVLGDDLLPRLGEFRKLDIREMDTGAELPAKIASMNAYLGGFPIARALG
                     EGADVVITGRCVDSAVTLGALIHAFGWSMDDHDRLAAGTLCGHIIECGAQCNGGNFTD
                     WRLVPDYDNMGFPVAEVSGDGSFVLSKPDGTGGLITPATVAEQMLYEIGDPRAYMVPD
                     VACDFTGATYQQVGKDRVRVAGAKGRPPTDTYKVSTTWPDGYKVSSIFMLGGREAVAK
                     GRHSADAIIKKTRRLFREKNLGDYRDVSIEVIGGEATYGPHARAQGSREVVVKIAAKH
                     DQKEALALLGREIAPMSTGGVVGMAGSFGAGRVSPSPVIRMFSCLVPKTLVPVTIELD
                     GRMIAMERGAKSGGFTLAELPVEAPPAPPLPTSGPNAATETVPLVALAYGRSGDKGDN
                     ANIGIFARRPEYEPILDAEVTEEAVAQYFAHRIQGKVTRWRLPGINGFNFLLRQALGG
                     GGMASLKADPLAKAFAQMLLDMPVRVPASVANRLASQ"
     gene            complement(1828..2613)
                     /locus_tag="VF991_10170"
     CDS             complement(1828..2613)
                     /locus_tag="VF991_10170"
                     /inference="COORDINATES: protein motif:HMM:NF004795.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX9556850.1"
                     /translation="MAAGPHKVDITWDRRPAGVVAHVVFDNAPRLNVLNPPALLDLTE
                     AFQSLSREDDLRVVVFSGAGGRAFIGGADINHMVTMKSSEDGRRFITLIHKLCQSIRD
                     CPVPVICRAEGYSLGAGLEVAAACDLRIAADNAHFGMPEVNVGIPSVVEAALLPRLIG
                     WGRTSRLLLTAETIDAAKAEAWGLVEEVVPAAKLDEAVERCVKAIVEAGPLTVRAQKR
                     LMRRWERLSLDEAVQAGIDALAQSVSDGEHIERMGAFINRKRK"
     gene            2698..>3276
                     /locus_tag="VF991_10175"
     CDS             2698..>3276
                     /locus_tag="VF991_10175"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9556851.1"
                     /translation="MPDTVAIDLDRYCVFVPSDPFEDHVGPFYFRISGDASQAGSVHC
                     VLPTEARHGNYAGGVHGGAILTFADYALCLVAGRAADGGTNSSFAMTVSIAVEFLDAG
                     RIGPPLEARGEPLQVTGRLAFARGSVTQEGHTIALWSGVCRHVARAKAMARKDEAAPV
                     RAEAAPQTVPADFELLANASVYSRHIGPSYARK"
BASE COUNT          488 a         1115 c         1116 g          557 t
ORIGIN      
        1 ggttgtgctg ctactgggag gcgaggcggt tcgccacgga cgcaggcacg cgtaccggca
       61 tatctagcag catctgcgcg aaggccttgg ccagcggatc ggccttgagc gaggccatgc
      121 cgccgccgcc cagcgcctgg cgcagcagga agttgaagcc gtttatgccg ggcagccgcc
      181 agcgcgtcac cttgccctgg atgcgatggg cgaagtattg cgccaccgcc tcctccgtca
      241 cctcggcgtc caggatcggc tcgtattcgg gtcggcgggc gaagatgccg atattggcgt
      301 tgtcgccctt gtcgcccgag cggccgtagg ccagcgccac cagcggcacg gtctccgtgg
      361 cggcattcgg gccgctggtc ggcagcggcg gcgcgggcgg cgcctcgacg ggcaactcgg
      421 ccaacgtgaa gccgccgctc ttggcgccgc gctccatggc gatcatccgt ccgtcgagct
      481 cgatcgtgac cggcaccagg gttttgggta ccaggcagga gaacatgcgg atcaccggcg
      541 agggcgagac gcggccggcg ccgaagctgc cggccatgcc gactacgccg ccggtcgaca
      601 tcggcgcgat ctcgcggccg agcagggcca gcgcctcctt ctggtcgtgc ttggccgcga
      661 tcttgaccac gacttcgcgc gagccttgcg cgcgcgcgtg cgggccgtag gtcgcctcgc
      721 cgccgatcac ctcgatgctg acgtcgcggt agtcgcccag gttcttttcg cggaacaggc
      781 ggcgcgtctt cttgatgatg gcgtcggcgc tgtgccggcc cttggccacc gcctcgcgcc
      841 cgcccagcat gaagatcgag ctgaccttgt agccgtcggg ccaggtggtc gagaccttgt
      901 aggtgtcggt gggcggccga cccttcgcgc ctgcgacgcg cacgcggtcc ttgccgacct
      961 gttggtaggt ggcgccggtg aagtcgcacg ccacgtcggg caccatgtag gcgcgcggat
     1021 cgccgatttc gtagagcatc tgctcggcca cagtggcggg cgtgatcagc ccgccggtgc
     1081 cgtcgggctt ggaaagcacg aacgagccgt cgcctgaaac ctcggccacc gggaagccca
     1141 tgttgtcgta gtcgggcacc aggcgccaat cggtgaagtt gccgccgttg cactgtgcgc
     1201 cgcattcgat gatgtgaccg cacaaggtgc cggccgccag ccgatcgtga tcgtccatgc
     1261 tccagccgaa ggcatggatc agcgcgccca gggtcaccgc cgaatcgacg cagcggccgg
     1321 tgatcaccac gtcggcgcct tcgccgagcg cgcgggcgat cggaaagccg ccgagatagg
     1381 cgttcatgct ggcgattttc gccggcagct cggcgccggt atccatctcg cggatgtcga
     1441 gcttgcggaa ctcgcccaac cgcggcagca gatcgtcgcc cagcacgacg gcgaccttga
     1501 gcttgacgcc cgccgcctcg caggctttca gcacggcgtc gcggcaggct tgcgggttca
     1561 cgccgccggc gttggtgatc accttgatct tcttttcggc gatctcgcgg gcgagcgggg
     1621 ccatgaccac gctcacgaaa tccgtcgcat agccggcctg cggattttta agcttctggg
     1681 tcgccatgat cgacatcgtg acttcggcca gatagtcgct gaccagatag tcgacggcgc
     1741 cgtgacgcac gagttgcacg gcggcggtct cggtgtcgcc ccagaagccc gaatggcagc
     1801 cgacgcggac tgtcttggcc atggccgtta cttcctcttg cgattgatga acgcgcccat
     1861 gcgctcgata tgctcgccgt cgctcaccga ctgggccaac gcgtcgatgc cggcctggac
     1921 cgcctcgtcg agcgacagcc gttcccagcg gcgcatcaac cgcttctgcg cccgcaccgt
     1981 cagtggcccg gcctcgacga tggcttttac gcagcgctcg accgcctcgt cgagcttggc
     2041 ggcgggcacg acttcctcga ccaggcccca ggcctcggcc ttggcggcgt cgatggtctc
     2101 ggcggtcagc agcaggcgcg acgtgcggcc ccagccgatc aggcgcggca gcagcgccgc
     2161 ctcgaccacg gaaggaatgc cgacattgac ctcgggcatg ccgaaatgcg cgttgtcggc
     2221 ggcgatgcgc aggtcgcacg ccgccgccac ctcgaggccg gcgcccaggc tatagccctc
     2281 ggcgcggcag atgaccggca cgggacaatc gcggatcgac tggcaaagct tgtggatcag
     2341 ggtgatgaag cgacggccgt cctcggaaga cttcatcgtc accatgtggt tgatgtcggc
     2401 gccgccgatg aacgcccggc cgccggcgcc ggaaaagacg acgacgcgca ggtcgtcttc
     2461 gcgcgacagc gattggaagg cttcggtgag gtcgagcagc gccggcggat tgagcacgtt
     2521 cagccgcggg gcgttgtcga acacgacatg cgccaccacg cccgccggac ggcggtccca
     2581 ggtgatgtcg accttgtggg ggcctgccgc catgatgttt cgctccgtgg ctcttcttgt
     2641 ctgcgggaat ttcatctatt agagcccgct tgcgaagctt cacaagagcc aacccggatg
     2701 cctgacaccg ttgccatcga tctcgaccgc tattgcgtgt tcgtgccgtc cgatccgttc
     2761 gaggaccatg tcgggccgtt ctatttccgg atctcgggcg atgcgagcca ggccggcagc
     2821 gtgcattgcg tgctgccgac cgaggcacgg cacggcaact atgccggcgg cgtgcatggc
     2881 ggggcgatcc tgaccttcgc cgactacgcg ctttgcctgg tggccggccg cgccgccgac
     2941 ggcggcacca acagctcgtt cgccatgacc gtgagcatcg ccgtcgagtt tctggacgcc
     3001 ggcaggatcg gcccgcctct cgaggcgcgc ggtgagccgt tgcaggtgac gggccgcctc
     3061 gccttcgcgc gtggcagcgt cacccaggag ggccacacca tcgccctgtg gtcgggcgtg
     3121 tgccgccatg tggcgcgcgc caaggcgatg gcgcgcaagg acgaggcggc accggttcgc
     3181 gccgaggcag caccgcagac cgtgccggcc gacttcgagc ttttagccaa tgccagcgtc
     3241 tattcccgcc atatcggccc atcttatgcg cgcaag
//
LOCUS       DASWGA010000426         2781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1951979, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000426 DASWGA010000000
VERSION     DASWGA010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1951979"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="VF991_10180"
     CDS             complement(<1..552)
                     /locus_tag="VF991_10180"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX9556852.1"
                     /translation="MSLVAPTTDAARLRLRRVLQDTPLFRDLDDKGLAAVERELTLLI
                     LPGGAPLFHPGEPADAVYVVTSGCLGVFRYEEEDNSDDPILIAEVPPGNLVGEMSLLS
                     HGKRTRSVAALRDSEVWRLAQSSFNALTAHHPEVLPALMRSVVARNASAPTKRRRQPR
                     TFAILPAGPDVPSARFTVLLAAAL"
     gene            complement(549..1637)
                     /locus_tag="VF991_10185"
     CDS             complement(549..1637)
                     /locus_tag="VF991_10185"
                     /inference="COORDINATES: protein motif:HMM:NF022447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HEX9556853.1"
                     /translation="MVSISQCFSESYAEARPKFCSAAAAAGGALRSWLNPKARGPGGE
                     ALYLDTARFGPADAANMLVLIAGTHGVEGHCGSGAEIAWLRNGGPARLPGDSGALLIH
                     AINPYGFAWSRRVTEDNVDLNRNFVDHDKAYPQNPGYEAIAAAILPKDWNEASQAETT
                     RAFDAYAQKHGAFGLQSALSGGQYAHADGIFFGGHRPTWSNRTVRAIARAELAAARRV
                     GVIDFHTGLGPFGHGELICAVAPGAKSFARAKAWYGEEMTSPESGTSTSAVVVGVMTD
                     AFPQELPDAEVTSIAIEYGTYTVPEVLGAVRADNWLHQRGDVKSAQGKAIKADIKERF
                     FPSGDKWREMVWTRADQTIGWALRGMSG"
     gene            complement(1715..>2781)
                     /locus_tag="VF991_10190"
     CDS             complement(1715..>2781)
                     /locus_tag="VF991_10190"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9556854.1"
                     /translation="TPDLESLGAIPPEEHTLLAARHAKLMLDQGFTSINSAAAAKPRL
                     DVVIRNAINAGEIPGPRMLAATPEMTVSGGLGDVRLWHLHRETFAIVCDGPEEFRKVA
                     RQMVREGVDTLKINPSGDEFVPWARAQQTVMADAEVEAVCEVARQRGKRVAAHARSAE
                     SVKMCLRHGVDLIFHATFADAEAIDGLDKAKDRVFVVPTIGISYATLNEAAPWGLTTS
                     VAEGLGMRRELEHAIVVMQELKRRGVRVLPGGDYGFAWNPVGRNARDLEHFVTLLGFT
                     PMEAIVAATRLGGEIMMQGHELGQVKPGFLADLVLVDGNPAHDVKLLQDADRFLAIMK
                     DGAFHKPPTTARRADNIAAE"
BASE COUNT          409 a          956 c          974 g          442 t
ORIGIN      
        1 gagcgcggcc gccagcagca cggtgaagcg cgccgacggc acgtcgggcc ccgccggcag
       61 gatggcgaag gtgcgcggct gacgccggcg cttggtcggc gcgctggcgt tgcgcgccac
      121 gacgctgcgc atcagcgccg gcagcacctc gggatgatgc gctgtcaggg cgttgaagct
      181 cgactgcgcg agacgccaga cttcgctgtc acgaagggct gcgacgctac gggtgcgctt
      241 gccgtgcgac agcagcgaca tctcaccgac gagattgccc ggcggtacct ccgcgatcag
      301 gatcggatcg tcgctgttgt cctcctcttc gtagcgaaat acgccaaggc agccgctcgt
      361 caccacgtag actgcatcgg cgggttcgcc aggatggaac agcggtgcgc cgccaggcag
      421 gatcagcagg gtcagctcgc gctcgaccgc cgcgagaccc ttgtcgtcga gatcgcgaaa
      481 cagcggtgtg tcctgcagca cccgccgcag ccgcaggcgc gccgcatccg ttgtcggcgc
      541 gacgaggctc acccgctcat gcctctgagc gcccagccga tcgtctggtc ggcgcgcgtc
      601 cagaccatct cgcgccattt gtcgcccgac gggaagaagc gctccttgat gtcggccttg
      661 atcgccttgc cctgcgccga cttgacgtca ccgcgctggt gcagccaatt gtcggcgcgc
      721 accgcgccca gcacttcggg cacggtgtag gtgccgtatt cgatggcgat cgacgtcacc
      781 tccgcgtcgg gcagctcctg cgggaaggcg tcggtcatga cgcccaccac cacggccgac
      841 gtcgaggtgc cgctttcggg cgacgtcatc tcctcgccgt accacgcctt ggcgcgggcg
      901 aaggacttgg cgcccggcgc cacggcgcag atcagctcgc catggccgaa cggtcccagc
      961 ccggtgtgga agtcgatgac gccgacgcgg cgcgccgcgg cgagttcggc gcgggcgatg
     1021 gcgcgcaccg tgcggttgct ccaggtcggc cggtggccgc cgaagaagat gccgtcggca
     1081 tgggcgtact ggccgccgct gagcgcgctc tgcaaaccga aggcgccgtg cttctgggca
     1141 taggcgtcga acgcgcgcgt ggtctccgcc tggctcgcct cgttccagtc cttgggcagg
     1201 atggcggcgg cgatcgcctc gtagcccggg ttctgcggat aggccttgtc gtggtcgacg
     1261 aagttgcgat tgagatcgac attgtcctcg gtgacgcggc gcgaccaggc gaagccgtag
     1321 ggattgatgg cgtggatcaa gagcgcgccg ctgtccccgg gcagccgggc cggcccgccg
     1381 ttgcgcagcc aggcgatctc ggcgcccgag ccgcaatggc cctcgacgcc gtgcgtgccg
     1441 gcgatcagca ccagcatgtt ggcagcgtcc gccgggccga agcgcgccgt gtcgagatag
     1501 agcgcttcgc cgcccggccc gcgcgccttg ggattgagcc acgaccgcag cgccccgccg
     1561 gccgccgcgg cggcgctgca gaacttgggc cgcgcctcgg cgtagctctc ggaaaagcac
     1621 tgtgagatcg aaaccatcaa atcctccccg ccgcatacta gcacggcgga gacgtcggat
     1681 tctgcatgtc gatacggcgc agtgtggcgg ccgcttattc ggcggcgatg ttgtcggcgc
     1741 ggcgagcggt cgtcggcggc ttgtggaagg cgccgtcctt catgatcgcg aggaagcggt
     1801 cggcgtcctg cagcagcttg acgtcgtgcg ccggattgcc gtcgacgagc acgagatcgg
     1861 ccaggaagcc gggcttgacc tgccccagct cgtgcccctg catcatgatc tcgccgccga
     1921 gccgggtcgc cgcgacgatt gcctccatcg gggtgaagcc gagcagcgtg acgaaatgct
     1981 caaggtcacg cgcattgcgg ccgactggat tccacgcgaa accgtagtcg ccgccgggca
     2041 gcacgcgcac gccgcgccgc ttcagctcct gcatgaccac gatcgcgtgc tcgagctccc
     2101 gccgcatgcc gagaccttcg gcgacgctgg tcgtgaggcc ccagggagcc gcctcgttca
     2161 gcgtcgcata gctgatgccg atggtcggca cgacgaagac gcggtccttg gccttgtcca
     2221 gcccgtcgat cgcctcggcg tcggcgaagg tcgcatggaa gatcaggtcg acgccgtggc
     2281 gcaggcacat cttcaccgac tcagccgagc gggcatgggc ggcgacgcgc ttgccgcgct
     2341 ggcgcgccac ctcgcacacc gcctcgacct cggcatcagc catcaccgtc tgctgcgccc
     2401 gtgcccacgg cacgaactcg tcgcccgagg ggttgatctt cagcgtgtcg acgccttcgc
     2461 ggaccatctg ccgggcgacc ttgcggaact cttccgggcc gtcgcagacg atggcgaagg
     2521 tctcgcggtg gagatgccac aggcggacgt cgccgagccc gcccgagacg gtcatctccg
     2581 gcgtcgcggc gagcatgcgc gggccgggaa tttcgccggc gttgatggca ttgcggatga
     2641 ccacgtcaag ccgcggcttg gcggcggcgg cgctgttgat gctggtgaag ccctggtcaa
     2701 gcatcagctt tgcatggcgc gcggccagca gcgtgtgctc ttccggcgga atcgcaccga
     2761 gcgattcgag gtcgggcgtg t
//
LOCUS       DASWGA010000427         2036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_177817, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000427 DASWGA010000000
VERSION     DASWGA010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177817"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VF991_10195"
     CDS             complement(<1..222)
                     /locus_tag="VF991_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556855.1"
                     /translation="MTARPYPEKDRDSPSTDLHLSEELAAALRAVVIARDRLMAESPQ
                     SADYQAVLADYLKAAVHHLAILAVAQAQQN"
     gene            complement(351..548)
                     /locus_tag="VF991_10200"
     CDS             complement(351..548)
                     /locus_tag="VF991_10200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556856.1"
                     /translation="MADERNTARLQRRIGKRYRIDVVSLLRQAGGEPPKQGTMIREAR
                     AEWRPVSKVLNTEIILKTTLK"
     gene            589..1491
                     /locus_tag="VF991_10205"
     CDS             589..1491
                     /locus_tag="VF991_10205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556857.1"
                     /translation="MSALLVLGFAAGSWAQNGLERFEKEIKPQFELKKFSYASAEPLG
                     SSGFILNDVVAVVPANPATGDKESTVKIQKVTVEEMDFDRMKKDAKDDETPRFAKLKL
                     EGMTGDDEMFTALQPYGVPNVPVDIALDYRIDPAAKVLTLKTLEVSLRGQAKIVFSLV
                     MDGISDKAGMAGAKDDGKLRTASLTIDDSGLLSKLVPAMAKEQGAKPEEMVQTALVAL
                     ASFAEGQGPETLKALDAVSSFIADWKAPKGPLTLGLKPAKTAGLSDLDKIMMPNALVT
                     EFGFTASYPGTRAGAAKGGATAAK"
     gene            1488..>2036
                     /locus_tag="VF991_10210"
     CDS             1488..>2036
                     /locus_tag="VF991_10210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9556858.1"
                     /translation="MKRRTLIAGALMLPALPAAAQEIFPTRPIQMIVPFPPGGVADIT
                     GRPVAHVMGRLLKQSVVVVNKGGAGGAVGAAQAAHAQPDGYTILMALSSISVLPVADR
                     LQGRPPAYELDQLAPIALISADPTVLVVRADGPYRTLKDLVDAAKAKPATINYGSSGV
                     YGTLHVAMEIFAEAAGIKLFHIP"
BASE COUNT          361 a          652 c          675 g          348 t
ORIGIN      
        1 gttttgctgc gcttgggcaa cagcgagaat cgccaagtgg tgcaccgccg ccttgaggta
       61 atcggccagc acggcttgat agtcggcaga ctgcggactc tccgccatca aacggtcgcg
      121 tgcgatcacc accgcccgca gcgctgccgc cagttcctcg gagaggtgca ggtcggttga
      181 cggggaatca cggtcttttt ccggatacgg ccgagctgtc atgtttggat cgcctttttc
      241 ggggaactaa acaccgccag catcgagtcg ttgccgaccc ttttagccca tgtccggccc
      301 tctagatggg gtctgccgtc ttggctcgac cccaacactt gggtggcgcg ctatttcaat
      361 gtcgtcttga ggatgatctc ggtgttcagc accttggata ccgggcgcca ctcggcacgc
      421 gcttcgcgga tcatggtgcc ctgctttggt ggttcgccgc cagcttggcg cagcaagctg
      481 acaacgtcga tacggtatcg cttgccgatt cgccgttgca accgggcagt gttacgctcg
      541 tcggccaacc gacgggggct tctaatgcgg tcaatttggt caggaatctt gtctgcgctg
      601 ctggtgctcg ggttcgccgc aggatcgtgg gcgcaaaacg ggctggagcg cttcgagaag
      661 gagatcaagc cgcagttcga gctgaagaag ttcagctatg cgagcgccga gccgctcggc
      721 agctcgggtt tcatcctgaa cgacgtcgtg gccgtggtgc cggccaatcc ggcgacgggc
      781 gacaaggaga gtacggtcaa gatccagaag gtgacggtcg aagagatgga tttcgaccgc
      841 atgaagaagg acgccaagga cgacgagacg ccgcgcttcg ccaagctcaa gctcgagggc
      901 atgacgggcg acgacgagat gttcaccgca ctgcagcctt atggcgtgcc caacgtgccg
      961 gtcgacatcg cgctcgacta ccgcatcgat ccggcagcca aggtgctgac cctcaagacg
     1021 ctggaggtca gcctgcgcgg tcaggccaag atcgtgttct ccctggtgat ggacggcatc
     1081 agcgacaaag ccggcatggc cggcgccaag gatgacggca agctgcgcac cgcctcgctg
     1141 acgatcgacg acagcgggct tctgtccaag ctggtgccgg cgatggccaa ggagcaaggc
     1201 gcgaagccgg aagagatggt gcagacggca ctggtggccc tcgcgagctt cgccgaggga
     1261 cagggacctg aaaccttgaa ggcgctggac gcagtctcgt ccttcatcgc cgactggaag
     1321 gcgcccaagg ggccgctgac gctgggactg aaaccggcca agacggccgg cctctccgat
     1381 ctcgacaaga tcatgatgcc caatgcgctc gtgaccgagt tcggcttcac cgccagctat
     1441 cccggcaccc gagccggcgc ggccaagggc ggcgccacgg cagcgaaatg aagcggcgca
     1501 cgctgatcgc cggtgcgctg atgctgccgg cgctgccggc ggccgcccag gagatctttc
     1561 cgacccggcc catccagatg atcgtgccgt ttccgccggg cggcgtcgcc gacatcaccg
     1621 gccggccggt ggcgcacgtg atgggcaggc tgctcaagca atcggtcgtg gtcgtcaaca
     1681 agggcggcgc cggcggcgcg gtgggcgccg cccaggccgc ccacgcccag cccgacggct
     1741 acacgatcct gatggcgctg tcgtcgatct cggtgctgcc ggtggccgac cgcctgcaag
     1801 gccgcccgcc ggcctacgag ctcgaccagc tggcgccgat cgcgctgatc agtgccgatc
     1861 cgaccgtgct cgtggtccgc gccgacgggc cgtacaggac cttgaaggac ctggtcgacg
     1921 ccgcgaaggc caagcccgcg acgatcaact acggctcgtc gggcgtctac ggcactttgc
     1981 acgtggcgat ggagatcttc gccgaggccg ccggcataaa gcttttccac atcccc
//
LOCUS       DASWGA010000428         5515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1815556, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000428 DASWGA010000000
VERSION     DASWGA010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5515
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1815556"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..2510)
                     /locus_tag="VF991_10215"
     CDS             complement(90..2510)
                     /locus_tag="VF991_10215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9556859.1"
                     /translation="MNLPTHTRIVVVGGGAVGCSIAYHLAKAGQRDVLVLEKSGLTHG
                     STWHAAGLVGQLRSKRNLTRLMQYSAQLYGKLEAETGQATEWKPVGSLRLASSEERWS
                     ELKRMATTARSFDFELHTLSPKEAQEKFPLIAPDGIVGAVFVPNDGSVEPSSLTMAYA
                     KGARAGGVRIVENVLVTGFEADGRRITRVLTDQGAVACEIVVNAAGIWARDVAKMAAV
                     QVPAGAVEHQYLITEKSNSIPPGLPTLRDPDRIFYLKPEPGALAVGGWEKGTPTFGAD
                     GVPFSFGRELLQPNQERLEQFVLPAAERLPILNELGIRTVINGPIPISPDGEPIMGLA
                     PERDNFYVACGFTSGIAASGGAGKAMAEWIVEGEPGLDLWAFDVRRFGSHHMSAKYLA
                     ERSVDSYWRYYQIHYPIEELSSARGGRRSPLYPLLAAKNAVFGSRFGWERPNWFAPAG
                     SEAIDRPAFEGRPNWFGPVGAECRAARERAVLIDQSSFSKYEISGPGAFAALQRLAAN
                     DLDKPKGALVYTQLCNERGGIEADLTFARLDDNRFYMVTGSAFGVRDMGWIRKHLPSD
                     GSVAVQELTSARATINLAGPLCRQILDKVADGDVSNEAFPYMTARALRIGFAPVLVLR
                     VTYLGELGYELHLPTEYAAHVYELLWAAGRDFGLADAGYRAIDSLRLEKRYLYWGSDI
                     TPDYTPYEAGLGFAVSLKKQSDFIGRAALEKAKAAGPRRKLVTLLVDADVQLYGGEAI
                     RRDGRVLGVTSSAGWGHTIGKAVALGYVPAEDAGHADYEIEAFTRRHAARRIAGAAVD
                     PERKKILA"
     gene            complement(2507..3754)
                     /locus_tag="VF991_10220"
     CDS             complement(2507..3754)
                     /locus_tag="VF991_10220"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX9556860.1"
                     /translation="MDGTPIKARHALAPEIARLVTEHRPGGPLARDFYVAPEVFAADL
                     ARIFQRHWIFAGYAFQVPRPGDFFTYKIGTESVIVARDHAGTIRAFHNVCRHRGSRIC
                     KTEQGNAHRLVCPYHRWTYELDGALVVDTAHEFGVDKAELSLRPVALENAAGLLFISL
                     SETPPDFSDALATIRRKLKPHAIERARIAHQIDYVVKANWKIVFENNRECYHCPPHHK
                     EYNSAAYDVQRDMALLDPSLQPAIDAVVARANARFRALGLDEGDAMSTMTGGAFRCHR
                     TPVMEGAVTQSMDGKPLCNRLMGDIKEWDSGTLRTTVFPNFWQHTNCDYAAAARLTPI
                     GANETHVRGYWLVDGEAVEGRDYTLDRLLPIWDVTNRQDWTICQDQQEGVSSRAYVPG
                     PFSLIRERNVAHFLEWYLGELSA"
     gene            3919..4947
                     /locus_tag="VF991_10225"
     CDS             3919..4947
                     /locus_tag="VF991_10225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033225 - ATPase-coupled
                     2-aminoethylphosphonate transporter activity [Evidence
                     IEA];
                     GO_function: GO:0033226 - 2-aminoethylphosphonate binding
                     [Evidence IEA];
                     GO_process: GO:0033223 - 2-aminoethylphosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative 2-aminoethylphosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX9556861.1"
                     /translation="MRQAAILSTVALAAVGLSGAALAQKTKLTVYTAIENEQLDPFKK
                     AFEADNPAIEIAWVRDSTGVMTAKLIAEKDNPRADAVWGLAASSIGLFASMGMIEPYT
                     PAGAAALKPMFKSGKTPETWVGMDAFLAVLCFNTAEAEKNKKPKPTSWADLTKPEYKD
                     SIVMPNPASSGTGYLTVAGWLTIMGEDAGWKFMDALHQNVAQYLHSGSAPCVQAAKGE
                     RLMGIGFDMRGATEKTKGAPIDLIVPKEGLGWEMEVTAIMKGTKNLEAAKKLADWASS
                     LKANELYGKYYAIVANPQVKSMPANYPADGEKLMAKMDVEWMAKNRERILAEWTKRYD
                     GKSAPKAK"
     gene            4958..>5515
                     /locus_tag="VF991_10230"
     CDS             4958..>5515
                     /locus_tag="VF991_10230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9556862.1"
                     /translation="MTSHLEVRNLSKRFGDFSALGDISLDIAEGEFVCFLGPSGCGKT
                     TLLRAIAGLDPQTSGTIRQKGRDVSRLPPAQRDFGIVFQSYALFPNLTVTDNVGYGLV
                     SRRQARGAIAQRVDELLALVGLPDSGSKYPAQLSGGQQQRVALARALATSPALLLLDE
                     PLSALDARVRLRLRHEIKALQRRLGV"
BASE COUNT          913 a         1835 c         1867 g          900 t
ORIGIN      
        1 cgtagtcttt gctgggggcg cgcgactcca gtcgcgcgtc tttgctcgca ttgggagaag
       61 atcgcgccat tggagtggcg cgtccccagc taagccagga tcttcttccg ttcaggatcg
      121 accgcggcgc cggcgatgcg gcgcgccgcg tggcggcggg tgaaggcctc gatctcgtag
      181 tcggcatggc ccgcgtcctc ggccggcacg tagccgagcg cgaccgcctt gccgatcgtg
      241 tggccccagc cggcggacga agtgacgccc aaaaccctgc cgtcgcgacg gatcgcctcg
      301 ccgccataga gctggacgtc ggcatcgacc agcagcgtca ccagcttgcg ccgcggtccg
      361 gccgccttgg ccttctccag tgcggcgcgg ccgatgaaat cggactgctt tttcagcgac
      421 accgcgaaac ccaggcccgc ctcgtagggc gtgtagtcgg gcgtgatgtc gctcccccag
      481 tagaggtagc gcttctccag cctgagcgaa tcgatggcgc ggtagccggc gtcggccagc
      541 ccgaaatcgc ggccggccgc ccataaaagc tcgtagacgt gggcggcata ctcggtcggc
      601 aggtgcaatt cgtagcccag ctcgccgagg taggtgaccc ggagcaccag cacgggcgcg
      661 aagccgatgc gcagcgcgcg cgccgtcatg tacggaaacg cctcgttgct cacgtcgccg
      721 tcggcgacct tatccaggat ttggcggcag aggggtccgg cgagattgat cgtggcgcga
      781 gccgaggtca gctcctgcac cgcgacggag ccatcgctcg gcaaatgctt cctgatccag
      841 cccatgtcgc gcacgccgaa ggcgctgccg gtcaccatgt agaagcggtt gtcgtccagc
      901 cgcgcgaagg tgagatcggc ctcgatgccg ccgcgctcgt tgcagagctg ggtgtagacc
      961 agcgcgcctt tgggcttgtc gaggtcgttg gcagccagcc gctgcaaggc ggcgaaagcg
     1021 ccggggcccg agatctcgta tttggagaag gaactctggt cgatcagcac ggcgcgctcg
     1081 cgcgcggcgc ggcattcggc gccgaccggg ccgaaccagt tgggccgtcc ctcgaacgca
     1141 ggcctgtcga tcgcctcgct gccggccggt gcgaaccagt tgggccgttc ccagccgaag
     1201 cgcgagccga acaccgcgtt cttggcggcg agcagcgggt agagcggcga gcgccggccg
     1261 ccgcgcgcac ttgaaagttc ctcgatggga tagtggatct ggtagtagcg ccagtagctg
     1321 tcgacgctgc gttcggccag gtacttggcg ctcatgtgat ggctgccgaa gcggcgcacg
     1381 tcgaaggccc acaggtcgag ccccggctcg ccttcgacga tccattccgc catcgctttg
     1441 ccggcgccgc ccgacgccgc aatgcccgag gtgaagccac aggcgacgta gaaattgtcg
     1501 cgctcgggcg cgagacccat gatcggctcg ccgtcgggcg agatcgggat ggggccgttg
     1561 atcacggtgc ggatgccgag ctcgttcagg atcggcaggc gctccgcggc cggcagcacg
     1621 aactgctcca gccgctcctg gttgggctgt agaagctcgc ggccgaagga gaaggggact
     1681 ccgtcggcac cgaaggtcgg cgtgcccttt tcccagccgc cgacggcgag cgcgccgggc
     1741 tcgggcttta gatagaagat cctgtcgggg tcgcgcaggg tcggcaggcc aggtgggatt
     1801 gaattgctct tctcggtgat caggtactga tgctcgaccg cgccggccgg cacctgcacg
     1861 gccgccatct tcgccacgtc gcgcgcccag atgcccgcgg cgttgaccac gatctcacaa
     1921 gccacggcgc cctggtcggt cagcacgcgc gtgatgcgcc gcccgtccgc ctcgaagccg
     1981 gtgaccagca cgttctcgac gatgcgcacg ccgcccgctc gcgcgccctt ggcgtaggcc
     2041 atggtgaggc tggaaggctc gaccgagccg tcgttgggca cgaacactgc gccgacgatg
     2101 ccgtcgggcg cgatcagcgg gaatttctcc tgtgcttcct tgggcgacag cgtgtgcagc
     2161 tcgaagtcga agctgcgcgc cgtcgtggcc atgcgtttca gctcgctcca gcgctcctcg
     2221 gacgacgcca accgcaggct gccgaccggt ttccattccg tcgcctggcc ggtctcggcc
     2281 tcgagcttgc cgtagagctg ggcgctgtac tgcatgaggc gggtgaggtt gcgcttgctg
     2341 cgcaactgcc cgaccaggcc cgcggcgtgc caggtcgagc cgtgcgtcag gccgcttttc
     2401 tccagcacca gcacgtcgcg ctggcccgcc ttggcgaggt gataggcgat ggagcagccc
     2461 accgcaccgc cgccgaccac gacgatacgg gtgtgcgtcg gcaggttcac gcgctcagtt
     2521 ctccgagata ccactcgaga aagtgcgcga cgttgcgttc acggatcagc gagaacgggc
     2581 ccggcacgta ggcgcgcgag ctgacgccct cctgctggtc ctggcagatc gtccagtcct
     2641 ggcggttggt gacgtcccag atcggcagca ggcggtcgag cgtgtagtcg cggccctcga
     2701 ccgcctcgcc atcgaccagc cagtagccgc gcacgtgggt ctcgttcgct ccgatcggcg
     2761 tcaggcgcgc cgcggcggca tagtcgcaat tggtgtgctg ccagaaattg gggaacacgg
     2821 tggtgcgaag cgtgcctgag tcccactcct tgatatcgcc catcagccgg ttgcagagcg
     2881 gcttgccgtc catgctctgc gtcaccgccc cctccatcac cggcgtgcga tggcagcgga
     2941 aagccccgcc cgtcatggtc gacatggcgt cgccctcgtc gaggcccagc gcacggaagc
     3001 gggcgttggc gcgcgctacg acggcgtcga tcgccggctg cagcgaggga tcgagcagcg
     3061 ccatgtcacg ctgcacgtcg taggccgcgc tgttgtactc tttgtggtgg ggcgggcagt
     3121 ggtagcactc gcggttgttc tcgaacacga tcttccagtt ggccttcacg acatagtcga
     3181 tctggtgggc gatccgcgcg cgctcgatgg cgtgcggctt caacttgcgc cggatggtgg
     3241 cgagggcgtc cgagaaatcc ggcggcgtct cgctcaagga aatgaacagc agaccggcgg
     3301 cgttctccag cgcgaccggt cgcagcgaca gttcggcctt gtcgacgccg aactcgtggg
     3361 cggtgtcgac cactaacgcg ccgtcgagtt cataggtcca gcggtgatag gggcagacca
     3421 ggcgatgggc gttgccctgt tcggtcttgc agatccgcga cccgcggtgg cggcagacat
     3481 tgtggaaggc gcggatcgtc cccgcatgat cgcgcgccac gatcaccgat tcggtgccaa
     3541 tcttgtaggt gaagaagtcg cccggccgcg gcacctggaa ggcgtagccg gcgaaaatcc
     3601 agtggcgctg aaaaatccgt gccagatcgg cagcgaagac ctcgggtgcg acgtaaaaat
     3661 ccctcgccag cggtccgccc ggccgatgct cggtgaccag gcgggcgatt tccggcgcga
     3721 gggcgtggcg ggccttgatt ggcgtgccgt ccattctcgt ctccttctgg cccaagcgta
     3781 tcacgcagcc cttgcccggc cccagtgcca tgttaaggtt ttgcgagggg ctgcaacgaa
     3841 aacatcacgt ggggcgtgta gtccaagcga tcggcaacga tcaaaaaagg ggggcttgag
     3901 atgaccgtca ttacaaccat gcggcaggcc gcgatcctca gcaccgtagc gctggccgcc
     3961 gtcggcctga gcggcgcggc gttggcacag aagaccaagc ttacggtcta caccgcgatc
     4021 gagaacgagc agctcgatcc gttcaagaag gccttcgagg ccgacaatcc cgccatcgag
     4081 atcgcctggg tgcgcgattc gacgggcgtg atgacggcca agctgattgc cgaaaaggac
     4141 aacccccgcg ccgacgcagt gtggggcctg gcggcttcga gcatcggcct gttcgccagc
     4201 atgggcatga tcgagcccta cacgccggcc ggcgcggcgg cgctgaagcc gatgttcaag
     4261 agcggcaaga ccccggagac ctgggtcggc atggacgcct tcctcgccgt gctgtgcttc
     4321 aacaccgccg aggccgagaa gaacaagaag cccaagccca ccagctgggc ggatctcacc
     4381 aagccggaat acaaggactc gatcgtgatg ccgaacccgg cctcttcggg caccggctac
     4441 ctcaccgtcg ccggctggct caccatcatg ggcgaggacg ccggctggaa gttcatggac
     4501 gcactgcacc agaacgtggc gcagtacctg cattccggct cggcgccctg cgtgcaggcc
     4561 gccaagggcg agcgcctgat gggcatcggc ttcgacatgc gcggcgccac cgagaagacc
     4621 aagggcgcgc cgatcgacct gatcgtgccc aaggagggcc tcggctggga gatggaagtc
     4681 accgccatca tgaagggcac caagaacctc gaggcggcca agaagctcgc cgactgggcg
     4741 tcctcgctca aggccaacga gctctacggc aagtactacg ccatcgtcgc caatccgcag
     4801 gtcaaatcga tgccggccaa ctatccggcc gacggcgaga agctgatggc caagatggat
     4861 gtcgaatgga tggccaagaa ccgcgagcgc atcctcgcgg agtggaccaa gcgctacgac
     4921 ggcaagtcgg cgccgaaggc caaatgatcc gggccaagtg acgagccacc tcgaagtccg
     4981 aaacctttcc aagcgcttcg gcgacttcag cgccctcggc gatatctcgc tcgatatcgc
     5041 cgagggtgag ttcgtctgct tcctcggccc ctcgggctgc ggcaagacga cgttgctgcg
     5101 cgctatcgcc ggcctcgatc cgcagacctc cggcacgatc cgccagaagg gccgcgacgt
     5161 ctcgaggctg ccgccggccc agcgcgactt cggcatcgtc ttccaatcct acgcgctctt
     5221 ccccaacctc accgtcaccg acaatgtcgg ctacggcctg gtgagccggc gtcaggcgcg
     5281 gggcgcgatc gcccagcgcg tcgacgagct tttggcgttg gtcggcctgc ccgactcggg
     5341 gtcgaaatat cccgcgcaac tctcgggcgg ccagcagcag cgcgtggcgc tggcgcgcgc
     5401 gctcgcgacc tcgccggcgt tgctgctgct cgacgaaccc ttgtcggcgc tcgatgcgcg
     5461 ggtgcgcctc cgcctcaggc acgagatcaa ggcgctgcag cgccggcttg gcgtc
//
LOCUS       DASWGA010000429         8687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_302381, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000429 DASWGA010000000
VERSION     DASWGA010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8687
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302381"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="VF991_10235"
     CDS             <1..663
                     /locus_tag="VF991_10235"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9556863.1"
                     /translation="IFAREAPVTHDGREIALPYSGPGATGLGKPLKSILHMNPHIPIF
                     LATGNEATVKLTAEIADGWLPMGFMPGAMAEYRPWLEEGFRRAGNGKGFGDFAIHAAV
                     HVEVDNDVEAALARLKPEVALYVGGMGHKTKNFHNDIMVRRGFGDAATRIQELYLAGR
                     KDEAVASVPDEWVDMKSLVGPPARIRQRYRAWEDCGADSLSVRSRQPEALEVMAEAAR
                     LS"
     gene            complement(771..1499)
                     /locus_tag="VF991_10240"
     CDS             complement(771..1499)
                     /locus_tag="VF991_10240"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9556864.1"
                     /translation="MFVLGWAASPLRNSLWGMIMLRRLLVVFSAVWLLAACASEPPPP
                     PPPQPAAVAPPSFMVFFDWDRSNLSQQALVTIKQAADAFKTRGSAQITATGHTDTSGP
                     EAYNMALSLRRANAVKDALVREGVPAPAITVVGKGETQLLVPTGDGVREPQNRRVEIV
                     VGGGGQVSSIFSDPRSYCKALSDKWRQLRTSQADTPEAAAMAQCEAGNYQAGIPTLEN
                     ALIANKIPLPAPGFRWPGQPIGPS"
     gene            1823..2773
                     /locus_tag="VF991_10245"
     CDS             1823..2773
                     /locus_tag="VF991_10245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX9556865.1"
                     /translation="MPAGLEFVKILGRWLGALEGETCMAATCPVNAGDASWSVEDIPY
                     HTLVHDRVRDDRRLFYILASASFIEITSDLYTRNLVEFFRPDSEIVDWLEGNWESEEL
                     QHGAALKRYVQTAWPDFDWEAAYRSFVAEYSRICTLDQLAGTRALEMAARCVVETGTA
                     TFYRMLSELSREPVLKRLAAEISADEVRHYKHFYRYFLRYRRLEQPGRAAIFRTLLNR
                     ATEVETEDAFYAFKAVCLGRNPDTGFRKRDYAAYRDSVVQLAKHHFPHEMAIKMLLKP
                     LDLNPMVGRAMVPAVTSATRLFVRSWGAASNAKVHADRRP"
     gene            2833..3513
                     /locus_tag="VF991_10250"
     CDS             2833..3513
                     /locus_tag="VF991_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9556866.1"
                     /translation="MAQRIRRVVTGHDKDGQSMFIADGKAPNILEMKSMPGVALTDLW
                     RTKTAPASNSGNSDAAAGKIKLEPPENGTIFRIVEFPPDSAWRKTADAKAAFASIGAG
                     GAPDHESGDPMMHATATVDYIIVLRGEIYAIMDKGEKLLGQGDILIQRGTNHSWSVRS
                     DQPCVIAAILVGAKPAGRLMRGVKRKSPRRAKRTTSQGSRARRSKSASTAAINVRRRV
                     SSVGKVAA"
     gene            complement(3420..3716)
                     /locus_tag="VF991_10255"
     CDS             complement(3420..3716)
                     /locus_tag="VF991_10255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556867.1"
                     /translation="MTDKTIDLDRRRGMEAQKATDLRRLLAEVEANERTLRLRQDELE
                     AHLAAAPAANWPEAAEKARYVLGLYAATLPTEDTRRRTLIAAVLADFERLAREP"
     gene            complement(3728..4582)
                     /locus_tag="VF991_10260"
     CDS             complement(3728..4582)
                     /locus_tag="VF991_10260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX9556868.1"
                     /translation="MIALRIHHKTTYRYHEPVKLGPHRLMLRPRESRELRLMSNFVSV
                     TPAAMVTWAHDVCGNAVALATFGALADHLVIDSVAELELDAAPWPVFDIAASAADYPF
                     FYAREEWIDLGALTVAQYADPAGRLRDWARAFVRGCPTNTLALLKDLSAGVAEGILYQ
                     SREDEGTQSPIETLDRGRGSCRDLAVLFVEAARSLGFGARIVSGYLYNPERQRDVGTT
                     HAWAEIFVPGAGWISFDPTNRGVGGFNLIPVAVARDIRQAMPVSGSFTGMTGAFQGMS
                     VEVVVGQQ"
     gene            4958..5320
                     /locus_tag="VF991_10265"
     CDS             4958..5320
                     /locus_tag="VF991_10265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556869.1"
                     /translation="MQFPANTKPLIWGAVGGAIACMIVGFTWGGWVTGGTARKDAATA
                     AHDAVVVALAPICAAQYRTQSDASAKIAELAKASSWERGSTVEKSGFATMPGSKTTDS
                     DVARACAEMLATPPTPKT"
     gene            complement(5417..8020)
                     /locus_tag="VF991_10270"
     CDS             complement(5417..8020)
                     /locus_tag="VF991_10270"
                     /inference="COORDINATES: protein motif:HMM:TIGR03480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEX9556870.1"
                     /translation="MSTRASLIGRVVATSTRQPLIVLLLAVVLTAAALVYTARHFAMT
                     ADTAELISTKLEWRQRELAFEAAFPQLQNLTMVVVDGATPELADAAARRLTAALQGKP
                     DLFRTVRRPVGGAFFERNGLLLLPLDEVEATTKALMRAQPLLGPLAADPSLRGVLSGI
                     SNTLQGIKHRQATLHDIEPAMTALAATFEKAAAGQPAFFSWRTLIAGTQAGPRQTRHA
                     VLVQPVMDYTALEPGAAASTAIRATARALGLDPAHGVTVRLTGPVPLADEEFATLAED
                     AHLILGAMAAALLGILWLAVRSARVVIAILATTLVGLIMTAAIGLLATGRFNLISVAF
                     IPLFVGLGVDFSIQFSVRSLAERLIHPNLRAALTVTGTTIGRALALSAAAIGAGFFAF
                     LPTTYIGVAELGTIAGLGMIVAFVLSIVLLPALLTLLRPPAGRLAEVGFTMLAPVDIF
                     VRRHRPTVLAMALLAAAVSCALLPLVRFDFNPLDLKSSKVESMTTLQALASDPDWTPN
                     AINVLAPSLAQSLAVARRLDALPAVSQTVTLQSFVPVQENEKLALIANAAMALKPILD
                     VAPLAPPSDSALQHGLATTAAALRRAASGATDSTAGAARRLADALERLQAATPDVRAA
                     AASAVVAPLAIMLDQTRALLQAGPVTLKTLPPELVADWIAKDGRARIQVLPRGSLDDN
                     ASLRRFATAIQNVAPDATGRPISISASGDSVVEAFVQAGVYSILAIILLLAVVLRRSR
                     DVLLTLLPVLLSGLLTFATCAALDLPLNFTNIIALPLLFGVGVAFNIYFVLAWRAGET
                     AMLQSSLMRAVVFSALTTATAFGALWLSSHPGTASMGRLLMISLAWELLVTLLFRPAL
                     LSRPPAAPDTA"
     gene            complement(8196..>8687)
                     /locus_tag="VF991_10275"
     CDS             complement(8196..>8687)
                     /locus_tag="VF991_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX9556871.1"
                     /translation="GFDGDDRSVFDDTVNFNIDANYDACAYSALTPYPGTLTWYEMKK
                     ANRIVSFDWTKYDQGHVVYRPAQMSGDELRLGLEGAYRNFYAASSIARRFPLRGNRHR
                     AQWLIYNLFMRKGSQTANIHSIAEPTAEPDVAPMPPILPIKREWRAAVLEAAGGGPGP
                     HMG"
BASE COUNT         1562 a         2850 c         2928 g         1347 t
ORIGIN      
        1 attttcgcgc gcgaggcgcc ggtgacgcac gacggccgcg agattgcgct gccctatagc
       61 ggaccgggcg cgaccgggct cggcaagccg ctgaaatcca tcctgcacat gaatccgcac
      121 attccgatct tcctcgcgac gggcaacgag gcgacggtca agctcaccgc cgagatcgcc
      181 gacggctggc tgcccatggg attcatgccc ggcgccatgg cggagtatag gccgtggctc
      241 gaagagggct tccgccgggc cggcaacggc aagggattcg gcgacttcgc catccatgcc
      301 gcggtgcatg tcgaggtcga caacgacgtc gaagcggcgc tcgccaggct gaagccggag
      361 gtggcgctct atgtcggcgg catgggccac aagacgaaga acttccacaa cgacatcatg
      421 gtgcgccgcg gtttcggcga cgccgccacg cgcatccagg agctctacct ggcaggccgc
      481 aaggacgagg ccgttgcctc ggtgcccgac gaatgggtcg acatgaaatc gctggtcggt
      541 ccgccggccc gcatccgcca gcgctatcgc gcgtgggagg attgcggcgc cgactcgctc
      601 agcgtgcgct cgcgtcaacc cgaggcgctg gaagtgatgg ccgaggcagc gcgcctcagc
      661 tgacgcgcct ccgccaatga aaaaggcggc cctcgcgagg gccgcctttt cttcaccttt
      721 tcttcaaagg ggtggcaggc gttgccgctt gccacccgta aggcaatcgc tcagctcggc
      781 ccaatgggct gcccgggcca gcggaagccg ggcgccggga gcgggatctt gttggcaatc
      841 agggcattct caagcgtcgg gataccggct tggtagttgc ctgcctcgca ctgggccatc
      901 gctgccgctt cgggggtatc ggcctgggag gtgcggagct ggcgccactt gtcgctcaag
      961 gccttgcagt aggaccgggg gtccgaaaag atgctcgaca cttggccgcc gccgccaacc
     1021 acgatctcga cgcggcggtt ctgcggctcg cgcacgccgt cgccggtcgg caccagcagc
     1081 tgcgtctcgc ccttgccgac gaccgtgatc gccggagccg gcacgccctc acgcaccagc
     1141 gcgtccttga ccgcattggc acgacgcagc gacagcgcca tgttgtaggc ttccggaccg
     1201 gacgtgtcgg tgtggccggt cgccgtgatc tgggcactgc cccgggtctt gaaggcgtcg
     1261 gcggcctgct tgatcgtgac cagggcctgc tgcgagaggt tcgagcgatc ccagtcgaag
     1321 aacaccatga acgacggcgg agcgactgcc gcgggttgtg gcggcggcgg aggcggcggc
     1381 tccgaggcac aggcggccaa cagccatacc gctgaaaaca caaccagtag tcttctgagc
     1441 atgatcatcc cccacagaga gtttcggagc ggcgatgcgg cccatccgag gacgaacatt
     1501 agcacgagcg cgccccggcc agaaacgctc gaggatcaaa ctggttccgt tgtcacccgc
     1561 aagtcattac cgaagcttct caaccgctgg ttactggacg ccgcagcgcg ccaccttgcg
     1621 ccagcgttac aggatcgtca cctacgacca gtcgggcacc ggtgccgagc gcgatgtcgg
     1681 gagaacttgc aagggcaatc aagggcgcga ccccgcacat cgcgccgtgg ggcgctcacg
     1741 cgctgaaagg gacggagcca gaggccttca attcccttct gctggacttc cgcgatcgcc
     1801 tccagggcgt ccatggccag gattgccggc cggtctcgaa tttgtgaaaa tcttggggcg
     1861 ttggcttggg gcgttggaag gagaaacgtg catggcggcg acatgccccg tcaacgcggg
     1921 cgacgcttcc tggtcggtgg aggacatccc ctaccacacg ctcgtccacg accgggtgcg
     1981 cgacgaccga agactttttt atatcctcgc gtccgcctcc ttcatcgaaa tcacctcgga
     2041 cctctacacg cgtaatctgg tcgagttctt ccggcctgac agcgagatcg tcgactggct
     2101 ggagggcaac tgggaaagcg aggaattgca gcacggcgcg gcgctgaagc gctatgtcca
     2161 gaccgcctgg ccggatttcg attgggaagc cgcctaccgg agcttcgtcg ccgaatactc
     2221 ccggatctgc accctcgatc agctggccgg cacgagggcg ctcgagatgg cggcgcgctg
     2281 cgtcgtggag accggcaccg ccaccttcta ccgcatgctg tcggaactga gccgcgagcc
     2341 ggtgctgaag cgcctcgcgg ccgagatcag cgccgacgag gtccggcact acaagcattt
     2401 ctaccgctat ttcctgcgct accggaggct cgaacaacca ggccgcgctg cgattttccg
     2461 cacgctcctc aatcgggcca ccgaggtcga gaccgaggac gccttctatg ccttcaaagc
     2521 cgtctgcctc ggccgcaacc ccgacaccgg gttccgcaag cgggactatg cggcgtaccg
     2581 cgacagcgtc gtgcagctcg ccaagcacca ctttccccac gaaatggcga tcaagatgct
     2641 gttgaagccg ctcgacctca atcccatggt cgggcgcgcg atggtgccgg ccgtcacgtc
     2701 ggccacgcga ttgttcgtgc gttcctgggg cgcggcgtct aatgccaagg tccatgccga
     2761 ccgccgccct taacgtctcg atcgcgagct ccctagccct ccccgtgctc gaggtttccg
     2821 gaggagatcc gtatggccca gcgcattcgc cgcgtcgtta ccgggcatga caaggacggc
     2881 cagtcgatgt tcattgccga cggcaaggcg ccgaacatcc tcgagatgaa gtcgatgccc
     2941 ggcgtcgcct tgaccgatct gtggcggacc aagacggcgc ctgcctcgaa cagcggaaac
     3001 agcgatgccg cggcggggaa gatcaagctc gagccgccgg agaacggcac gatctttcga
     3061 atcgtggagt ttccccccga tagcgcatgg cgcaagacag ccgatgcaaa ggccgccttc
     3121 gcctcgatcg gcgccggcgg cgcgcccgac catgagtcgg gcgatcccat gatgcacgcc
     3181 acggccaccg tcgattacat catcgtgctc aggggcgaga tctacgccat catggacaag
     3241 ggagagaagc tgctcgggca gggcgacatc ctcatccaaa gagggaccaa tcactcctgg
     3301 agcgtgcgca gcgatcaacc gtgcgtcatc gccgccatcc tggtcggcgc gaagcccgcg
     3361 ggacggctca tgagaggcgt caaacgcaag tcaccgcgac gggcgaagag gacgacctct
     3421 caaggctccc gggcgaggcg ttcgaaatcc gccagcacgg cggcgatcaa cgtccgccgg
     3481 cgcgtatctt cggtgggcaa ggtcgccgca tagaggccga gaacatagcg ggccttctcg
     3541 gcggcttccg gccagttggc tgccggggcg gcggcgaggt gcgcttccag ctcgtcctgg
     3601 cgaaggcgca aagtgcgttc gttggcttcc acctcggcaa gcaggcggcg caggtcggtc
     3661 gccttctggg cttccattcc gcgccgccgg tcgaggtcga tcgtcttgtc ggtcatggtg
     3721 cgcctcctca ctgctggcca acgacgactt cgaccgacat gccctgaaag gcgccggtca
     3781 ttcccgtgaa gctgccggac accggcatcg cctgacggat atcgcgcgct accgcgacgg
     3841 gaatgaggtt gaagccgccg actccgcgat tggtcggatc gaagctgatc cagccggcgc
     3901 ccggcacgaa gatttccgcc caggcgtgcg tggttccaac gtcccgctgg cgctccggat
     3961 tgtacaggta gcccgagacg atccgcgcgc cgaagcccag gctgcgcgcg gcttcgacga
     4021 acaacaccgc gagatcgcgg cacgagccgc ggccgcggtc gagggtctcg atcggcgact
     4081 gcgtgccctc gtcctcgcgg ctttgataga ggatcccttc ggcgaccccg gcgctcagat
     4141 ccttgagcag cgccagcgtg ttggtcggac agccgcgcac gaaggcgcgc gcccagtcgc
     4201 gcagccgccc ggccggatcg gcgtattgcg cgaccgtgag cgcgccgaga tcgatccatt
     4261 cttcgcgggc ataaaagaac ggatagtcgg cggccgacgc cgctatgtcg aagacgggcc
     4321 agggcgccgc atcgagctcc agttcggcaa cgctgtcgat caccagatgg tcggccaggg
     4381 caccgaacgt agccagagcg acggcgttgc cgcaaacatc gtgcgcccag gtgaccatcg
     4441 cggcaggcgt cacgctgacg aaattcgaca tcaggcgaag ctcgcggctc tcccgcggac
     4501 gcagcatcag ccggtgcggc ccgagcttca ccggctcatg gtagcgatag gtcgtcttgt
     4561 gatggatcct cagcgcgatc aatgaacctc catcgggcaa ggcgcgccgc ccgccgtggg
     4621 tacacctctt ttcctagtgc cgccagcctc cgggccgcgg cggcgtcgat gacgatttgc
     4681 gtcaattaag gcagggggtg ctgttccaaa taggacagcg agccggttgg acacacgcgc
     4741 acgcagggtg tagctgtatc gaccgtcgcc ccccaagtct ccggcctgcg acggctgaga
     4801 gaggcctgcg ctcccgccca ccgcgaggtg aatgcattgc gcagccggcc ggtaccgccg
     4861 ttcctgttcc cgattttccc gatcgtgttg atcgtcggct gcgcgatccc gcgcccgccg
     4921 acctgacggc cgcagcgcgg ccctgaaagg acttgccatg caatttccag caaataccaa
     4981 acccctgata tggggcgccg tgggcggcgc catcgcctgc atgatcgtag gcttcacgtg
     5041 gggcggctgg gtgaccggcg gcaccgcccg caaggatgcg gccacggccg cgcacgacgc
     5101 ggtcgtggtg gcgctggcgc cgatctgcgc cgcccaatat cggacgcaga gcgatgcgtc
     5161 ggccaagatc gccgagctgg ccaaggcaag ctcatgggag cgcggcagca ccgtggagaa
     5221 gagcggtttt gccaccatgc ccggcagcaa gacgaccgat tccgacgtcg cccgcgcctg
     5281 cgcggagatg ttggccacgc cgcccacgcc caagacctga gcgaaacacc gggcgttccg
     5341 tcgatcggcg gtggccagcg ccatcgccga tagcgggcat tgcagaacgc attttcgaac
     5401 gcctctgcga gatcagctac gccgtgtccg gcgccgccgg cggccgcgac agcagagcgg
     5461 gccggaacag caaggtgaca agaagctccc aggcgagcga gatcatcagc agtctgccca
     5521 tgctggcggt gccgggatgg ctcgacagcc acaaggcgcc gaacgccgta gcggtcgtca
     5581 gcgcgctgaa gacgacggca cgcatcaggc tcgactgcag catcgccgtc tcccccgcac
     5641 gccatgccag cacaaaataa atattgaagg caacgccgac gccgaacagc agcggcagcg
     5701 cgatgatgtt ggtgaagttc agcggcaggt caagggcggc gcaagtggcg aaggtcagca
     5761 gcccgctcag cagcaccggc agcagggtca gcagcacgtc gcggctccgt cgcagcacca
     5821 ccgccagaag caggatgatg gcgaggatgg aatacactcc cgcctgcaca aaggcctcga
     5881 cgacgctgtc gcccgacgcg ctgatggaaa tcggccggcc ggtcgcatcc ggcgcgacgt
     5941 tctggatcgc cgtcgcgaaa cgccgcagcg atgcgttgtc gtccaggctg ccgcgcggca
     6001 ggacctgtat ccgggcgcgc ccgtctttcg cgatccagtc ggcgacaagc tcaggcggca
     6061 gggtcttgag cgtcaccgga ccggcctgta acaacgcgcg ggtctgatcg agcatgatgg
     6121 cgagcggggc gaccacggca gaagcggccg cggcgcggac gtccggtgtc gcggcctgca
     6181 ggcgctccag cgcatcggcc aggcgacgcg ccgcgccggc ggtggagtcc gttgcgccgc
     6241 tcgccgcccg gcgcagcgcc gccgccgtcg tcgccaagcc gtgctgcagc gcggagtccg
     6301 atggcggcgc gagcggagcg acgtcgagga tgggtttgag ggccatcgcg gcgttggcga
     6361 tcagcgccag tttctcgttc tcctgcacgg gaacgaagct ctgcagcgtg acggtctggg
     6421 ataccgccgg cagggcgtcg aggcggcgcg ccacggccag cgattgggcg agcgaggggg
     6481 cgaggacgtt gatcgcattg ggcgtccagt cgggatcgga tgcgagggcc tgcagggtcg
     6541 tcatcgactc caccttggaa ctcttgaggt ccaggggatt gaagtcgaaa cgcaccagcg
     6601 gcagcagcgc acacgagacc gccgccgcga gaagcgccat ggccagcacc gtcgggcgat
     6661 gccgacgcac gaagatgtcg accggcgcca gcatcgtgaa accgacctcg gccagccgac
     6721 cggccggagg gcgcagcagg gtcaacagcg cgggcagcag gacgatgctc aaaacgaagg
     6781 cgacgatcat gccgagaccg gcgatggtcc cgagttcggc cacgccgata taggtggtcg
     6841 gcaggaaggc gaagaagccg gcgccgatgg cggcggccga cagcgccagt gcccgtccga
     6901 tggtggtgcc ggtcaccgtc agcgccgccc tgagattggg gtggatgaga cgctcggcga
     6961 ggctgcggac gctgaactga atgctgaagt cgacgccgag cccgacgaat agcgggatga
     7021 aggcgaccga gatgaggttg aagcggccgg tcgccagcaa accgatggcg gccgtcatga
     7081 tcaggccgac aagcgtggtg gcgaggatcg caatgacgac gcgcgcagaa cgcaccgcca
     7141 gccacaggat ccccaacagc gccgcggcca tcgcgccgag gatcaggtgc gcgtcctcgg
     7201 ccagcgtcgc gaattcctcg tccgccagcg gcaccgggcc ggtcaggcgc acggtcacgc
     7261 catgcgccgg atcgaggccg agggcgcggg ctgtcgcgcg gatggccgtg ctcgcggccg
     7321 cgcccggctc aagcgccgta taatccatca ccggttgaac cagcacggcg tgccgcgtct
     7381 ggcggggtcc ggcctgtgtc ccggcgatca gcgtccgcca cgaaaaaaaa gccggctgcc
     7441 cggccgcggc tttttcaaac gtcgctgcga gcgccgtcat cgcgggttcg atgtcatgca
     7501 gcgtggcttg tcggtgcttg atcccttgca gggtgttcga gatgccgctc aagacgccac
     7561 gcagactggg atcagccgcc agcgggccaa gcaggggctg tgcccgcatg agcgctttcg
     7621 tggtcgcctc gacttcatcc agcggcagca gcaacagccc gttgcgctcg aaaaaagccc
     7681 caccgacggg acgtcgcacg gtgcggaaaa ggtcgggctt tccttgcagc gccgcggtga
     7741 gccgccgggc cgccgcgtcg gccagctcgg gggtcgcgcc gtcgaccacg accatggtca
     7801 gattctggag ttgcgggaag gccgcctcga acgccagctc gcgttgccgc cactccaact
     7861 tcgtcgagat caattcggcg gtgtcggcgg tcatggcgaa atgccgcgcc gtgtagacca
     7921 gcgccgccgc cgtcagcacc acggcgagaa gcagtacgat caacggctgg cgggtgctcg
     7981 tcgcgacgac acgaccgatc agcgaagccc tggtggacac aaaatgcctc aagaattctc
     8041 aaggatggat gcgaagtcga tcggcaatat cacagtgatt ggggcgtgga ccaccaacgc
     8101 gtcgccatgg cctgatggac gcgagctgga tgaaggcctg gtagtcggcg gcgcgtttgt
     8161 cgtatcgaat tgcgatacga cgacattgag cctcctcagc ccatgtgcgg tcctggtccg
     8221 ccgccggctg cctcgaggac ggcggcgcgc cattcgcgct tgatgggcag gatcggaggc
     8281 atcggagcga cgtcgggttc tgccgttggc tcggcgattg aatggatatt cgcggtctgc
     8341 gatcccttgc gcatgaaaag attgtagatc agccattgcg cgcgatgccg gttgccgcgc
     8401 agcgggaacc ggcgggcgat cgaagatgcc gcatagaaat tcctgtaggc gccctccagg
     8461 ccgaggcgca gctcgtcccc cgacatctgc gcagggcgat agacgacgtg tccctggtca
     8521 tacttcgtcc agtcgaagga aacgatacgg ttcgccttct tcatctcgta ccaggtgagc
     8581 gttcccggat acggcgtaag cgccgaatag gcacaggcat cgtagttggc gtcgatgttg
     8641 aagttaacgg tgtcgtcgaa aaccgagcga tcgtcgccgt cgaagcc
//
LOCUS       DASWGA010000430         2039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_809624, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000430 DASWGA010000000
VERSION     DASWGA010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_809624"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VF991_10280"
     CDS             <1..495
                     /locus_tag="VF991_10280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HEX9556872.1"
                     /translation="IHRLYTRVTPGFIRVDADEVTYPLHIMLRYRLERALLTGDLALA
                     DLPGAWNDGMRELLGIVPPDDALGCLQDIHWPDGGWGYFPTYTLGALAAAQLFAAARR
                     AYPGLLAAIGKGDFAPLLGWLRANVHGKGSIAGTDEILSEATGAPLGTSAFKAHLESR
                     YLSA"
     gene            505..756
                     /locus_tag="VF991_10285"
     CDS             505..756
                     /locus_tag="VF991_10285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1272 domain-containing protein"
                     /protein_id="HEX9556873.1"
                     /translation="MLDLRPNCECCDKDLPNGAPDALICTYECTFCADCARTRLGGHC
                     PNCGGDLVRRPTRPERMLQKHPASTKRIRKDHEACRQVA"
     gene            768..>2039
                     /gene="thrC"
                     /locus_tag="VF991_10290"
     CDS             768..>2039
                     /gene="thrC"
                     /locus_tag="VF991_10290"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX9556874.1"
                     /translation="MRYISTRHGSQGNPAPLGFEEIMLAGLARDGGLYLPAEWPHFSP
                     AEIAKLKGLPYAELAFRIMRPFVGEAFDEATFRRLIGEAYGSFETPEVAPLKKLGDSG
                     LHLLELFHGPTLAFKDVALQLLGRMLDHTLRAKGQRATIVGATSGDTGSAAIEAVRDR
                     KTIDIFMLHPRDRVSEVQRRQMTTVLAPNVHNIAVAGTFDDCQDLAKACFNDLAFRDR
                     YALTAVNSINFARVMAQIVYYFWAALRLGAPDRPVAFTVPTGNFGNVYAGYAAQRMGL
                     PVHHFVVAANTNDILARFFETGVMTTAEVVPTLSPSMDIQISSNFERLLFDLYDRNGK
                     ALAEAMAEFRRTGTLKVGANALSHVRALFDAGRLDDEGTLAAIADCHSRFGETIDPHT
                     AVGYAIAQRHRRDPEVPMVVLATAHPAKFPDA"
BASE COUNT          331 a          739 c          631 g          338 t
ORIGIN      
        1 atccaccgcc tctacacgcg cgtgacgccg ggcttcatcc gagttgacgc cgacgaagtg
       61 acctatccgc tgcacatcat gctgcgctac cggctggagc gcgccctgct gacgggcgac
      121 ctcgcgctgg ccgacttgcc cggcgcctgg aacgatggca tgcgcgagct tttgggcatc
      181 gtgcctcccg acgatgcgct gggctgcctg caggacatcc attggccgga cggcggctgg
      241 ggctatttcc cgacctacac cttgggcgcc ctggcggcgg cccagctctt tgccgctgcc
      301 cgccgcgcct atcccggcct cctggcggcc atcggcaagg gcgacttcgc gcctttgctg
      361 ggctggctgc gcgccaacgt gcacggcaag ggctcgattg ccggcaccga cgagatcctg
      421 agcgaggcca cgggagcgcc cttgggcaca tcagccttca aggcccatct ggaaagccgc
      481 tatctgtcgg cgtaagagga agccatgctc gacctccgcc ccaactgcga atgctgcgac
      541 aaggacctgc ccaacggcgc gcccgatgcc ctgatttgca cctacgagtg cacgttctgc
      601 gccgactgcg cgcgaacccg gctgggtggc cattgcccga attgcggtgg ggatctcgtc
      661 aggcgtccga cccgtccgga gcggatgctg cagaaacatc ccgcttcgac caaaaggatc
      721 cgcaaggatc acgaagcctg ccgccaagtc gcctagccgg agccatcgtg cgttacatca
      781 gcacccgcca tggctcgcag ggcaatcccg cgccgctcgg cttcgaggag atcatgctcg
      841 cgggcctcgc ccgcgacggc gggctttatt tgcccgccga gtggccgcac ttctcgccgg
      901 ccgagatcgc caagctcaag ggcctgccct atgccgagct ggccttccgc atcatgcggc
      961 ccttcgtcgg cgaggctttc gacgaggcga ccttccgccg tctgatcggc gaagcctatg
     1021 gctcgttcga gacgccggaa gtagcgccgc tgaagaagct gggcgacagc ggattgcatc
     1081 tgctggaact gttccacggc cccacgctgg ccttcaagga cgtggccctg cagctcctcg
     1141 gacgcatgct cgaccacacg ctgcgcgcca aagggcaacg cgccaccatc gtcggtgcga
     1201 cctcgggcga caccggctcg gcggccatcg aggcggtgcg cgaccgcaag actatcgaca
     1261 tcttcatgct ccatccgcgc gaccgagtga gcgaggtcca gcgccgccag atgaccacgg
     1321 tgctggcgcc caacgtgcac aacatcgccg tcgccggcac gttcgacgac tgccaggacc
     1381 ttgccaaggc ctgcttcaac gatctcgcct tccgcgaccg ttatgcgctg acggcggtga
     1441 actcgatcaa cttcgcccgc gtgatggcgc agatcgtcta ctacttctgg gccgcgctca
     1501 ggctcggcgc gcccgaccgg ccggtggcgt tcacggtgcc gaccggcaat ttcggcaatg
     1561 tctatgccgg ctacgccgcg cagcgcatgg gcctgccggt ccaccatttc gtggtcgccg
     1621 ccaataccaa cgacatcctg gcccgcttct tcgaaacggg tgtcatgacc acggccgagg
     1681 tggtgccgac gctgagcccc agcatggaca tccagatatc cagcaacttc gagcgcctgc
     1741 tgttcgacct ctacgaccgc aacggcaagg cgctggccga ggcgatggca gagttccgcc
     1801 ggaccggcac gctcaaggtc ggcgccaatg cgctgtccca cgtgcgcgct ctgttcgatg
     1861 ccggccggct cgacgacgag ggcacactgg ccgccatcgc cgactgccac agccgtttcg
     1921 gcgagaccat cgatccgcac accgccgttg gctatgccat cgcccagcgg catcgccgcg
     1981 atcccgaagt gccgatggtg gtgctggcga ccgcccatcc tgccaagttc cccgacgcc
//
LOCUS       DASWGA010000431         3794 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_680358, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000431 DASWGA010000000
VERSION     DASWGA010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3794
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680358"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..935)
                     /locus_tag="VF991_10295"
     CDS             complement(<1..935)
                     /locus_tag="VF991_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556875.1"
                     /translation="MTVAPVPGVTLKTAKANNIHMRYAEIGSGPLVLFCHGWPESWYS
                     WRHQLTAVSAAGFRCVAPDMRGYGGSEAPEPIDQYTLFHMVGDMAELTKALGESKAVI
                     VGHDWGAPVAWHAALWLPDLFPAVCAMSVPYAPPGYVDVLTALEKFGINDFYLQYFQK
                     PGVPEAELQADIRSALRRIYFTAAGELEEKGKGFARLTGGTLLANTVDPPALPTWLSE
                     ADLDYYTQEFARTGFRGGLNWYRNLKRNWELGGPWRGQPIRQPSLFIAGSRDGVLRFP
                     AAQAQLDAFPKTLPGLVGSHIIEGAGHWVQQERPG"
     gene            complement(977..1846)
                     /locus_tag="VF991_10300"
     CDS             complement(977..1846)
                     /locus_tag="VF991_10300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEX9556876.1"
                     /translation="MLYEYLIEPFADFGFMRRALAASLALAVGGSSIGVFLILRRMSL
                     MGDALAHALLPGAALGFLLGGLSLPAMSLGGFLAGAATALASGIIARFTSMREDASFA
                     AAYLTAMALGVLIVSLRGSAVDLMNILFGAILAVDDAALILVLSTATLTLVGLAAIYR
                     PLVVECFNPGFLAAMGIRGSLYHYLFLALAVLNMVAGFQALGTLMALGLILLPAVAAS
                     FWAREVWSMILIAAPVAFASAAIGPLVSFHAGLPSGPVIVLFASLFFVGSLLLGTRAS
                     VRARLSHPVHLRG"
     gene            complement(1872..2615)
                     /locus_tag="VF991_10305"
     CDS             complement(1872..2615)
                     /locus_tag="VF991_10305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003569821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556877.1"
                     /translation="MTAALRLIDLTVSYDRHPAVHHLSVEIPAAEMTAIVGPNGAGKS
                     TLLKALLGLAPHIEGRIECSAKRIAYLPQQAEIDRSFPISVFDTVLLGRWSRFGGFGA
                     AKHADIHDAQHAIEAVGLDGFGHRPIDTLSVGQFQRVLFARLLLQDADLVLLDEPFAA
                     IDSKTVADLTAVIQRWRAEKRTVVAVLHDLEQVRRDFPNALLLARELVDAGPTARVLS
                     VDNLLRARTMAEAWDEHADACDVPTRLSA"
     gene            2865..3635
                     /locus_tag="VF991_10310"
     CDS             2865..3635
                     /locus_tag="VF991_10310"
                     /inference="COORDINATES: protein motif:HMM:NF018473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HEX9556878.1"
                     /translation="MTKSWVTRRRSLLIGGTAAAGIAVAGGLGPAGARSTSEGPWAVE
                     LFTSQGCNSCPPSDAYLGSLARRPDIVALSFHVDYWDYIGWKDAFATRATTERQRAYA
                     RVLKQRYVYTPEMVVDGIGHDTGRERGPIEALLAEAQRRSPRRATPELARAVGGPLTI
                     TLAPFALDGGPADVTLAIYDRRHSTPVASGENQGRMLDNFNVVRRLEVLARWDGAAAS
                     WTIDADRLQPGQGAAVLVQRADHGAVIGCNKFEPMVSG"
BASE COUNT          657 a         1258 c         1341 g          538 t
ORIGIN      
        1 tcgccgggcc gttcctgctg cacccaatgg ccggcgccct cgatgatgtg gctgccgacc
       61 agccccggca gggttttcgg gaaggcgtcg agttgcgcct gggcggcggg aaagcgcagc
      121 acgccgtcgc ggctgccggc gatgaacagc gagggctggc ggatcggctg gccgcgccac
      181 ggaccgccaa gctcccagtt acgtttgagg ttgcggtacc agttcaggcc gccgcgaaag
      241 ccggtgcggg cgaattcctg cgtgtagtag tcgagatcgg cctcgctcag ccaagtcggc
      301 agcgccggcg gatcgacggt gttggcgagc aacgtgccgc cggtcagtcg ggcgaagccc
      361 ttgccctttt cctcaagctc gccggcggcg gtgaaataga tgcggcgcag tgcgctccgg
      421 atatcggcct gcagctcggc ctcgggcacg ccgggcttct ggaaatattg caggtagaag
      481 tcgttgatgc cgaacttttc gagcgcggtc aggacatcga catagcccgg cggcgcgtag
      541 ggcacgctca tggcgcagac ggcggggaag agatcgggca gccacagcgc ggcatgccag
      601 gcgaccggcg cgccccagtc gtggccgacg ataacggctt tgctttcgcc caatgccttc
      661 gtgagctcgg ccatgtcgcc gaccatgtgg aagagcgtgt attggtcgat cggctcgggc
      721 gcctcgctgc cgccgtagcc gcgcatgtcg ggcgccacgc agcgaaagcc cgccgcgctc
      781 accgcggtga gctgatggcg ccacgaatac cagctctccg gccagccgtg acagaacaac
      841 accagcggcc cgctgccgat ctcggcgtag cgcatgtgga tgttgttggc cttggcggtc
      901 ttgagcgtga cgcccggcac cggggcaacg gtcatggtgg cttcctttcc ggaggaagcg
      961 agcctagcgg gtcgtcctac ccgcgcaagt gaaccggatg tgacagccgc gcccgcaccg
     1021 aggcacgcgt gcccaacagc aacgagccca cgaagaacag gctggcgaac agcacgatca
     1081 ccgggcccga cggcaggccg gcatggaacg agaccagggg cccgatcgcc gccgaggcga
     1141 aggccacggg ggccgcgatc aggatcatcg accagacctc gcgcgcccag aacgaggcgg
     1201 cgaccgccgg cagcaggatg aggccgagcg ccatcaaggt gccgagcgcc tggaagcccg
     1261 ccaccatatt gagcacggcg agcgccagga agagatagtg atagagcgag cccctgatgc
     1321 ccatggcggc gaggaagccc gggttgaagc actcgaccac cagcggccgg tagatggcgg
     1381 cgagcccgac cagagtcaga gttgcggtcg agagcaccag gatcagcgcc gcgtcgtcga
     1441 ccgcgaggat agcgccgaac aggatgttca tcaggtcgac cgccgagccg cgcaacgaca
     1501 cgatgagcac gccgagcgcc atcgccgtga gataggccgc ggcgaaactt gcatcctcgc
     1561 gcatgctggt gaagcgcgcg atgatgcccg aggcgagcgc cgtcgccgcg ccggccaaga
     1621 agccgccgag gctcatcgcc ggcagcgaca gcccgcccag caggaagcca agcgccgcgc
     1681 cgggcagcag ggcgtgggca agcgcatcgc ccatcaggct catgcgacgc aggatcagga
     1741 acacgccgat cgaggaaccg ccgaccgcca gcgcgagact cgccgccagg gctcggcgca
     1801 tgaagccgaa atcggcgaag ggctcgatca ggtactcgta gagcatcggc gggcggacag
     1861 gatgtaagag atcaggcgct caatcgcgtc ggcacatcgc aggcgtcggc atgctcatcc
     1921 cacgcctcgg ccatggtgcg ggcgcgcagc aggttatcga ccgacagcac gcgcgccgtc
     1981 gggccggcat cgaccagctc gcgcgcgagc aggagcgcgt tggggaagtc gcgccgcacc
     2041 tgctcgagat cgtgcagcac ggccaccacc gtgcgcttct cggcgcgcca gcgctggatc
     2101 accgccgtca ggtcggcgac ggtcttggaa tcgatggcgg cgaacggctc gtcgagcagg
     2161 accaggtcgg cgtcctgcag cagcaggcgg gcgaacagca cgcgttggaa ctggccgacc
     2221 gacagcgtat cgatcggccg gtgcccgaag ccatcgagac cgaccgcctc gatagcgtgc
     2281 tgggcgtcgt ggatgtcggc atgcttggct gcgccgaagc cgccgaagcg cgaccagcgg
     2341 ccgagcagca cggtgtcgaa caccgaaatt ggaaaggagc ggtcgatctc ggcctgctgc
     2401 ggcagatagg cgatgcgctt ggccgagcac tcgatacggc cctcgatgtg cggcgccagc
     2461 ccgagcagcg ccttcaagag cgtgctcttg cccgcgccgt tgggcccgac aatggctgtc
     2521 atctcggccg ccgggatctc caccgacaga tgatgcaccg ccggatggcg gtcgtagctt
     2581 acggtcaggt cgatcaggcg aagggcggcc gtcacagcgc ccaccaggcg gccagccaca
     2641 gcacggccga gaccgcgagt gccgctgcaa tgcgagcggg cgcgctcatg gcgagcaggg
     2701 tggtgccggg tgagacgggt tcgtgcatgg atcgggggcc gggatcgctg gccatattgt
     2761 tataatgtta cgctagtgaa gtccagcaaa cgtgatccag ccctcagggc tggctaaccg
     2821 tttgttgatt ggcaggaccg aggggcggcg cgcatcttgg gatcatgaca aagtcttggg
     2881 ttacacggcg gcggtccctg ctgatcggcg gcaccgccgc ggcaggcatt gcagtagcgg
     2941 gcgggcttgg cccggctggc gcgcgaagca cgtcggaggg accgtgggcg gtcgaactct
     3001 ttacgtccca gggatgcaac tcctgcccgc cgtcggacgc ctatctcggc agcctcgccc
     3061 ggcggcccga catcgtcgcg ctgtcgttcc atgtcgatta ttgggactat atcggctgga
     3121 aggatgcctt cgccacgcgc gccaccaccg agcgccagcg cgcctatgcc cgcgtcttga
     3181 agcagcgcta cgtctatacg cccgagatgg tggtcgacgg tatcggccac gataccggcc
     3241 gcgagcgcgg cccgatcgag gcgctgctgg ccgaagcgca acgccgctcg ccgcggcgtg
     3301 cgacgcccga gctggcgcgc gcggtcggcg gcccgctcac catcacgctc gcgccgttcg
     3361 ccctcgacgg cggaccggcc gacgtcacct tggcgattta tgatcggcgc cattcgacgc
     3421 cggtggcgag cggcgagaac cagggccgca tgctcgacaa cttcaacgtc gtgcgccgtc
     3481 tcgaagtatt ggcccgctgg gacggtgcgg cggcaagctg gacgatcgat gccgatcgcc
     3541 tccagccggg ccagggcgcc gcggtgctcg tgcagcgcgc cgaccatggc gcggtgatcg
     3601 gctgcaacaa gttcgagccg atggtgtcgg gctagttttc gccgtcgcgc cggccttgct
     3661 tcggccacgg ccgcgcgcca agttgggtcg atgtcgccta ccagcgccgc cggccgcctg
     3721 accgccgttc tcgggccgac caacaccggc aagacctatc tcgccatcga gcgcatgctc
     3781 ggccacgagt cggg
//
LOCUS       DASWGA010000432         4107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_680501, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000432 DASWGA010000000
VERSION     DASWGA010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4107
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680501"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..1176)
                     /gene="msrP"
                     /locus_tag="VF991_10315"
     CDS             complement(220..1176)
                     /gene="msrP"
                     /locus_tag="VF991_10315"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007567812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEX9556879.1"
                     /translation="MLIKRRQGWELGENRATPEGVYLRRRELVSAMGLAAAALALPTV
                     ASAEDKDPSAGLYPAKRNDKYGVPAPMTEERRATTYNNFYEFGGDKSIWRDAQKLELR
                     PWTIKVGGMVDKPFEIGIDDLLAKVQLEERVYRHRCVETWSMIVPWSGFPLRSLVELC
                     KPTGSAKYIVMKTLSKPSVMHEQRDLLYPWPYTEGLTIDEAMHDLAFIATGLYGKPIA
                     KQNGAPLRLVAPWKYGFKSVKSIVSVEFSDKRPASFWEKLQASEYGFWANVNPEVPHP
                     RWSQATEKPLGSDNRIPTLLYNGYAEFVAGLYADRKAEKLFI"
     gene            complement(1241..1753)
                     /locus_tag="VF991_10320"
     CDS             complement(1241..1753)
                     /locus_tag="VF991_10320"
                     /inference="COORDINATES: protein motif:HMM:NF017897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mpo1-like protein"
                     /protein_id="HEX9556880.1"
                     /translation="MTSDLFRRQLGSYAAVHRDWRNKATHFVGIPVIVFSLLLLLSLW
                     TFELGGRQWALSLAVATLAVLGWLALDLGIGIVMALAMAVAWYAAEALAGALGSAQPV
                     WIAFIALFVGGWALQFLGHHYEGKRPALLDNIFQAFIGPMFLVAEALVVMGQRGDLAQ
                     AMGEGDVTAR"
     gene            complement(1834..2064)
                     /locus_tag="VF991_10325"
     CDS             complement(1834..2064)
                     /locus_tag="VF991_10325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556881.1"
                     /translation="MHPADLSLVLKEENWPADSRWVRTAFLASEEGMARPDSTPRFIL
                     AQDNKVILAVTGNAGWKDKMWPKILEVTESKA"
     gene            complement(2388..>4107)
                     /locus_tag="VF991_10330"
     CDS             complement(2388..>4107)
                     /locus_tag="VF991_10330"
                     /inference="COORDINATES: protein motif:HMM:NF009379.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX9556882.1"
                     /translation="ERVVALTPLLKYIEDHHIPHILFVNKIDSAEVRVRDMLSALQDV
                     SARKLVLRQVPIRRPTSDGGEETVGYVDLVSERAYRYKPSGASDLIEMPVEILPRESE
                     ARREMLETLSEFDDTLLEQLIEDIAPEKSLIYRDLHDEFGADQIVPVLLGAGDRENGV
                     RRLLKALRHDTPFVAETAKRRALPSNGAAMAECFKVLHQSHAGKLSLCRVWSGALAEG
                     QSVGGQRIGTLLRPFGQRLDKIAEAKAGEIVALAKVDALSGGQSLGAGGIAPTADFPP
                     ADPAVFGLSLKAKNRNDEVKLSGALHKIVEEDPSLSFEARGETHELLIRGQGEMHLKV
                     AVDKLAGRYNVAVDTETPRVAYRETIQGGAQQHARYKRQTGGHGQFADIKVEIKPLPR
                     GSGFRFVDKVVGGVVPRNFIPAVEQGLAEYTKEGPLGQPVVDLEVTLFDGQYHSVDSS
                     EMSFKMAARIAMSEAMPKCKPVLLEPILKVTVAAPSESTPRIQRLISGRRGQLLGYDA
                     RDGWNGWDEVSALMPEAEIADMIVEIRSVTQGVGTFRTEFDHLQELAGRTAERIVEET
                     KKRAAA"
BASE COUNT          652 a         1363 c         1398 g          694 t
ORIGIN      
        1 gtcggtcgcg ctgccggcgg cgaagggcac gacgatcttg atcggcttgt cgggaaagcc
       61 ctgcgcgaaa gccgccctcg aaagacaaag cggcgccgcc gacagggcgg caacgcccgc
      121 aagcgcggaa cggcggttca atttcacgaa aagatcctcc catggcctcg tcggccaacc
      181 cgttgtagcg ggccggcgcg gcgaggcaaa ggcgggaggc tagatgaaga gcttttccgc
      241 tttgcggtcg gcgtacaggc cggccacgaa ctcggcgtag ccgttgtaga gcagggtggg
      301 gatgcggtta tcgctgccca gcggcttttc ggtcgcctgg ctccagcgcg ggtgcggcac
      361 ctcggggttc acgttggccc agaagccgta ttcgctggcc tgcagcttct cccagaacga
      421 cgccggccgc ttgtcgctga actcgacgct gacgatcgac ttcacgctct tgaagccgta
      481 cttccacggc gccacgagtc ggagcggcgc gccgttctgt ttggcgatcg gcttgccgta
      541 gaggccggtg gcgatgaagg cgaggtcatg catcgcctcg tcgatcgtca ggccctcggt
      601 gtagggccag ggatagagca ggtcgcgctg ctcgtgcatc accgacggct tgctgagcgt
      661 cttcatgacg atgtacttgg cgctgcccgt gggcttgcac agctcgacca gcgagcgcag
      721 gggaaagccg ctccacggca cgatcatcga ccacgtctcg acgcagcgat ggcggtagac
      781 gcgctcctcg agctgcacct tggcgagaag atcgtcgatg ccgatctcga acggcttgtc
      841 gaccatgccg ccgaccttga tcgtccaggg acgaagctcg agtttctggg cgtcccgcca
      901 gatgctcttg tcgccgccga attcgtagaa gttgttgtat gtggtggcgc ggcgttcctc
      961 ggtcatgggt gcgggcacgc cgtatttgtc gttgcgcttg gccggataga gcccggccga
     1021 cggatctttg tcctcggccg acgcgaccgt cggcagggca agcgccgccg cggcgagccc
     1081 catcgcgctc accagctcgc ggcgcctgag gtagacgcct tccggcgttg cccggttttc
     1141 gcccaattcc cagccctgtc tgcgcttgat cagcatgcgt aaaaactcct gtgcgcccga
     1201 cacttggtgc aacgacgcgg tccgcgcaaa tcaaccctgc tcaccgcgcc gtgacgtcgc
     1261 cttcgcccat ggcctgggcg agatcgccgc gctggcccat gacgaccagg gcctcggcga
     1321 ccaggaacat cgggccgatg aaggcctgga agatgttgtc gagcagcgcc gggcgcttgc
     1381 cttcgtagtg atgcccgagg aactgcagcg cccaaccgcc gacgaacagg gcgatgaagg
     1441 cgatccacac gggctgggcg gagcccagcg cgccggccag cgcttcggcg gcgtaccagg
     1501 cgacggccat ggccagggcc atgacaatgc cgatgccgag atcgagcgcc agccagccca
     1561 gcacggccag ggtcgccacg gccagcgaca gcgcccattg gcggccgccg agctcgaagg
     1621 tccatagcga cagcagcagc aggagcgaaa agacgatgac cggaatgccg acgaagtgcg
     1681 tcgccttgtt gcgccagtcg cgatgcaccg cggcatagct gccgagctgg cggcgaaaca
     1741 ggtcactggt catggcgatc tccgaccacg ggggcgtcgt cccgtggaaa cgctccgcgg
     1801 gtccctatga tccaaccccg tagctgggaa aagctaggcc ttgctctcgg tcacttccag
     1861 gatcttgggc cacatcttgt ccttccaacc ggcattgccg gtgacggcca ggatgacctt
     1921 gttgtcctgg gcgaggatga agcgcggcgt cgaatcgggc cgggccatgc cctcttcgct
     1981 cgccaggaag gcggtgcgga cccagcggga atcggccggc caattctctt ccttcagcac
     2041 cagcgacaga tcggcgggat gcacgatgcg gtagtcgagt ttcttgcagg cgtcggattt
     2101 gacgaagtca ggctcggact gggcacgcca gatcttgcag ccgcctcaaa gttcgtgacc
     2161 gacgaaaacc agcatcggct tgcccgactg ggcttgcgcg acgcgggcca atgacggtgc
     2221 ggacgccagc gctaggccgg ccgccaccac agaccttctc ttgagcatgc gatccatctc
     2281 ccgcggaacc attccacggg acgactatgg gcgaggtgag ggcccccgag aagccgcacg
     2341 gacgcggctt caccgtcttg tgaccggccc tctcgcgtcg gcaggcgtca ggccgccgcg
     2401 cgcttcttgg tctcctcgac gatgcgctcg gcggtccgtc cggccagctc ctgcaagtgg
     2461 tcgaactcgg tgcggaaggt gccgacgccc tgggtcaccg agcggatctc gacgatcatg
     2521 tcggcgatct ccgcctccgg catcagggcg gagacctcgt cccagccgtt ccagccatcg
     2581 cgcgcgtcat agcccagcag ctggccacgg cggcccgaga tcaggcgctg gatgcgcggc
     2641 gtcgattcgc tgggcgccgc tacggtcacc ttgaggatcg gctcgagcag caccggcttg
     2701 cacttgggca tcgcctcgct catggcgatg cgcgccgcca tcttgaacga catctccgag
     2761 ctgtcgacgg aatggtactg gccgtcgaac agggtgactt cgaggtcgac caccggctga
     2821 ccgagcgggc cttccttggt gtactcggcc aggccctgct cgacggcggg gatgaagttg
     2881 cgcggtacga cgccgcccac gaccttgtcg acgaaacgga agcccgagcc gcgcggcaag
     2941 ggcttgatct cgaccttgat gtcggcgaac tggccgtggc cgccggtctg gcgcttgtag
     3001 cgcgcgtgct gctgggcgcc gccctggatg gtctcgcgat aggccacgcg cggggtttcc
     3061 gtgtcgacgg ccacgttgta gcggccggcg agcttgtcga ccgcgacctt gagatgcatc
     3121 tcgccctggc ccctgatcag cagctcgtgg gtctcgccgc gcgcctcgaa cgagagcgag
     3181 ggatcctcct cgacgatctt gtgcagggcg cccgagagct tgacctcgtc gttgcggttc
     3241 ttggccttga gcgacaggcc gaacaccgcc ggatcggcgg gcgggaagtc ggcggtgggg
     3301 gcaatgccgc cggcgccgag cgactggccg cccgacaggg cgtcgacctt ggcgagcgcc
     3361 acgatctcgc ccgccttggc ctcggcgatc ttgtcgaggc gctggccgaa gggcctgagc
     3421 agggtcccga tgcgctggcc gccgacgctc tggccttcgg cgagcgcgcc cgaccagaca
     3481 cggcagagcg acagcttgcc ggcgtggctc tggtgcagga ccttgaagca ctcggccatg
     3541 gccgcgccgt tggacggcag cgcccgccgc ttggcggtct cggcgacgaa cggggtgtca
     3601 tggcgcagcg ccttcagcag gcggcgcacg ccgttctcgc ggtcgccggc gcccagcagc
     3661 accggcacga tctggtcggc gccgaactcg tcgtgcaggt cgcggtagat cagcgacttc
     3721 tccggcgcga tgtcctcgat cagctgctcg agcagggtgt cgtcgaactc cgagagggtt
     3781 tcgagcatct cgcggcgcgc ttctgattcg cgcggcagga tctcgaccgg catctcgatc
     3841 agatcggacg cgccgctcgg cttgtagcga taggcgcgct cgctcaccag gtcgacatag
     3901 cccacggtct cctcgccgcc gtcgctggtc ggccggcgga tcggcacctg gcgcagcacc
     3961 agcttgcgcg ccgacacgtc ctgcagcgcc gacagcatgt cgcgcacgcg gacctcggct
     4021 gagtcgatct tgttgacgaa cagaatgtgc gggatgtggt ggtcctcgat gtatttcaag
     4081 agcggcgtca gcgccaccac gcgctcg
//
LOCUS       DASWGA010000433         4984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1190715, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000433 DASWGA010000000
VERSION     DASWGA010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4984
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1190715"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VF991_10335"
     CDS             complement(<1..509)
                     /locus_tag="VF991_10335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HEX9556883.1"
                     /translation="MEYVIKKLPFDPAKVKGLSEKLLVSHHENNYSGAVKRLNAITAQ
                     LASLDFATAPVFVVNGLKREELIAANSMLIHELYFDTLAGEGEPTGALAEAINRDFGS
                     LARWKTEFSATGKALGGGSGWVLLTWSPRDKRLINTWAADHTHSLSNGRPILALDMYE
                     HAYHMDYGA"
     gene            complement(661..2028)
                     /gene="chrA"
                     /locus_tag="VF991_10340"
     CDS             complement(661..2028)
                     /gene="chrA"
                     /locus_tag="VF991_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HEX9556884.1"
                     /translation="MKDHGVPFGEAMKVWARVAALSFGGPAGQIAVMHHIIVEEKKWI
                     GEQRFLQALNYCTLLPGPEAQQLAVYIGWLMHKTKGGLFAGTLFVLPGLIAIMALSWI
                     YVLLGKVTLIQGLFFGLKAAVLVIVVEAVLRVGKRALKNNTMRGLAAAAFIALFLYDV
                     PFPIVIVVAGLIGYVGGRAGLPAFLAGGGHGKVGDKQLADADSLLGEETPEHARPNLR
                     WSLSITAVFLALWLVPVAALYFGLGGGNVFTKIAIFFSQMAVVTFGGAYAVLAYVAQQ
                     AVDNYHWVTAGEMLDGLGMAETTPGPLIMVTQFVGFLAAWREPGAMPPLLAATLGGLL
                     TTWVTFVPCFLWIFFGAPFVEALRANKALGAALGAITAAVVGVILNLAVWFALHVLFA
                     RLVPVHWLGASVDLPVVSSVDVPSLILSIAAAVAIFRFKFGMISVLLASSLAGVAYYL
                     VVGLS"
     gene            complement(2025..3026)
                     /locus_tag="VF991_10345"
     CDS             complement(2025..3026)
                     /locus_tag="VF991_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HEX9556885.1"
                     /translation="MTTNEASGAPWLLLIHQLPAKPAYARVKVWRRLQALGAVTVKGA
                     VYALPANAETREDFAWLAKEIVESGGEAIVCEAALVDGLSDGELQALFESARDEDYQT
                     IAAEARDLAARLADDLPDNALAEIAGQVARLRKQLDTVVAIDFFGADGREPADGLVSG
                     LEARLQREDTAVTTERTDGGPAATGEPGRLKGRVWVTRQGVQIDRIASAWLIRRFIDQ
                     GARFKFVPGTGYAATAGELRFDMFEGEFTHRGDRCTFEVLLAEAGLDDPALGAIGEII
                     HDIDLKDGKYGREEAAGIRTLIAGIASSHNDDNQRLERGGAVFDDLHRSFADKRDDK"
     gene            3148..4104
                     /locus_tag="VF991_10350"
     CDS             3148..4104
                     /locus_tag="VF991_10350"
                     /inference="COORDINATES: protein motif:HMM:NF014796.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HEX9556886.1"
                     /translation="MRYRLAPLFCRPWTLNGITPRLIESHYENNYGGALNRLNALTEE
                     LEALDPATAPASVISRLKRDQNTALNSTLLHELYFASLGGDGRVVPEVMAEAITRDFG
                     SVDRWRKEFIALASELANDSGWVLLTYVPRDGQLINQSTSDHLEGIAGGIPILALDMY
                     EHAYHLDFGANPTAYIASFMRNIEWNAVQGRFEDAIKVAPPRPLEQKQFGDLPSVTVE
                     QVAAMLKAGTPVQIIDARPRHYTTKSQDIMEGAVWRDPERLDEWIGELSKTEPVVTYC
                     VYGFHVGCETAITLRNAGFDARYMAGGHYAWKAIKGPVKLFE"
     gene            4129..>4984
                     /locus_tag="VF991_10355"
     CDS             4129..>4984
                     /locus_tag="VF991_10355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HEX9556887.1"
                     /translation="MSFHARPISFKPMRLHGLSTRLIASHYENNYGGAVRRLNAIRDE
                     LAILDPATAPGFRLNGLKREELIATNSMILHEAYFEALGEAGGGDPTGALAEAIARDF
                     GSLAKWRAEFVAMGKAVGGGSGWVLLTRSPRDGTLSNVWAADHTHGLAGGTPVLALDM
                     YEHAYHIDFGSNAAAYVDAFMANIAWGRVAARFAGTSPAKSPHSVDAATARAMLEADP
                     NLLVIDARLPDDAASVPVGLRGARRAPPDRVDAVAASLPRGAKALVYCAWGFEIGGDC
                     AAKLRERGI"
BASE COUNT          870 a         1707 c         1618 g          789 t
ORIGIN      
        1 ttggcgccgt agtccatgtg ataggcgtgc tcgtacatgt cgagcgccag gatcggccgg
       61 ccgttggaca ggctgtgggt atggtcggcc gcccaggtgt tgatcagccg cttgtcgcgc
      121 ggcgaccagg tgagcagcac ccagcccgag ccgccgccca gcgccttgcc ggtggcggag
      181 aattcggtct tccagcgcgc cagcgatccg aaatcgcggt tgatcgcttc ggcgagagcc
      241 cccgtcggtt cgccctcgcc ggccagggtg tcgaaataga gctcatggat gagcatcgaa
      301 ttggcggcga tcagctcctc gcgcttcagc ccgttgacca cgaacaccgg cgccgtcgcg
      361 aagtcgaggg acgcgagctg cgccgtgatg gcgttgagcc gcttcaccgc gccgctatag
      421 ttattctcgt ggtggctcac caggagcttc tcggacaggc ccttcacctt ggccggatcg
      481 aacggcagct tcttgatcac gtattccatc ttgggtcctc ctgatgcagg ttgcgctctt
      541 gtcgccgacg gcagcgctgc cgcggtcatg gcggccgcca cgacggtggc ggcgccgatc
      601 acatcgcgtc tcgtttgttg tgcggtcatt cgtccctcct tctgtaaggc tcgattcaac
      661 ctaggacagt ccaacgacga ggtagtaggc gacgcccgcg agcgagctcg ccagcagcac
      721 ggaaatcatc ccgaacttga aacggaagat cgccaccgcc gcggcgatcg acaggatgag
      781 cgacggcacg tcgaccgagc tcacgaccgg caggtcgacg gaggcgccca gccagtgcac
      841 cggcaccagc ctggcaaaca gcacgtgaag cgcgaaccac accgcgaggt tcaggatcac
      901 gccgaccacg gcggcggtga tggcgccgag tgcggcgccg agcgccttgt tggcgcgcaa
      961 cgcctcgacg aacggcgcgc cgaagaagat ccagaggaag cagggcacga aggtgaccca
     1021 ggtggtgagc agcccgccca gcgtggcggc gagcagcggc ggcatggcgc ccggctcgcg
     1081 ccaggcggcg aggaagccca cgaactgcgt caccatgatc agcggcccgg gcgtcgtttc
     1141 ggccatgccg aggccgtcca gcatttcgcc cgccgtcacc cagtggtagt tgtcgaccgc
     1201 ctgctgggcc acataggcca gcaccgcgta ggcgccaccg aaggtgacca cggccatctg
     1261 gctgaagaag atggcgatct tggtgaagac gttgccgccg cccaaaccga aatagagcgc
     1321 cgccacgggc accagccaga gcgccaggaa taccgcggtg atggacaatg accagcggag
     1381 gttcggccgg gcgtgctcgg gcgtttcctc gccgagaagg gaatcagcgt cggccagctg
     1441 cttgtcgcca accttgccat ggccgccgcc ggccaggaac gccggcagcc cggcgcgccc
     1501 gccaacgtaa ccgatgaggc cggcaaccac gatgacgatc ggaaacggca cgtcgtaaag
     1561 gaacagcgca atgaaggccg cggccgccaa cccccgcatc gtgttgttct tgagcgcgcg
     1621 cttgccgacc cgcagcacgg cctcgaccac gatcaccagc acggcggcct tcaggccgaa
     1681 gaacaggccc tggatcagcg tgaccttgcc gagcagaaca tagatccagc tcaaggccat
     1741 gatggcgatc aggccgggca gcacgaacag cgtgccggcg aacagcccgc ccttggtctt
     1801 gtgcatcagc cagccgatat agaccgcgag ctgctgcgcc tcggggccgg gcagcagggt
     1861 gcagtagttc agcgcctgca ggaagcgctg ctcgccgatc cacttcttct cctcgacgat
     1921 gatgtggtgc atcaccgcga tttgccccgc cggcccgccg aagctgagcg ccgcgacgcg
     1981 ggcccatact ttcatcgcct cgccgaacgg cacgccgtga tccttcattt gtcgtccctc
     2041 ttgtcggcga aagaccggtg gagatcgtcg aagacggcgc cgccgcgctc gagccgctgg
     2101 ttgtcgtcgt tgtgcgacga ggcgatgccg gcgatcaggg tgcggatacc ggctgcctcc
     2161 tcgcgcccgt atttgccgtc cttgaggtcg atgtcgtgga tgatctcgcc gatcgcgccg
     2221 agtgcgggat cgtcgaggcc ggcttcggcc aacaggacct cgaacgtgca gcgatcgccg
     2281 cggtgcgtga actcgccctc gaacatgtcg aagcgcagct cgcccgccgt ggcggcatag
     2341 cccgtgcccg gcacgaactt gaaacgcgcg ccctggtcga tgaagcggcg gatcaaccag
     2401 gccgaggcga tgcggtcgat ctgcacgccc tgccgggtca cccacacgcg gcctttcaag
     2461 cggccgggct cgccggtcgc ggccggccca ccgtcggttc gttcggtagt cacggctgta
     2521 tcctcccgtt gcaggcgggc ctcgaggccc gacaccaggc cgtcggccgg ctcgcggccg
     2581 tcggcgccga agaagtcgat ggcgaccacc gtgtcgagct gcttgcgcag gcgcgcgacc
     2641 tggccggcga tctcggccag cgcgttgtcg ggcagatcgt cggcgagacg agccgccagg
     2701 tcgcgcgcct cggcagcgat ggtctgatag tcctcgtcgc gcgccgattc gaacagcgcc
     2761 tgcagctcgc cgtcggacag gccgtcgacg agggccgcct cgcagacgat cgcctcgccg
     2821 ccgctttcga cgatctcctt ggcaagccag gcgaaatcct cgcgcgtctc ggcgttggcc
     2881 ggcagggcat agacggcgcc cttcaccgtc accgccccca gcgcctgcag ccgccgccag
     2941 accttcaccc gcgcataggc gggcttggcc ggaagctggt ggatcagcag cagccagggc
     3001 gcgccggagg cctcattagt cgtcattgtt catccgtatc ataccaaaga tagtatctgc
     3061 aacacacgta tcatatttgt cttgcattcc cgaaaaacaa ggctatgttc ccatgaaacg
     3121 agtgtatcac gaaaggaaac cgatagcatg cgttaccgcc tcgcccctct gttctgtcgt
     3181 ccctggaccc tcaacgggat cacgccgcgg ctgatcgaaa gccactacga aaacaactac
     3241 ggcggcgccc tcaatcgcct gaatgccctg accgaggaac tggaggcgct cgatccggcg
     3301 acggcacccg cctccgtcat aagccgcctg aagcgcgacc aaaacaccgc gctcaattcc
     3361 acgctcttgc atgagctgta cttcgccagc ctcggtggcg acggcagggt ggtgcccgag
     3421 gtgatggccg aggcgatcac gcgcgatttc ggttcggtcg accgctggcg gaaggagttc
     3481 atcgccctgg cgagcgagct ggcaaacgac tccggctggg tcctgctcac ctacgtgccg
     3541 cgcgacggcc agctgatcaa tcagagtacg tcggaccacc tcgagggtat cgccggcggc
     3601 atcccgatcc tggctctcga catgtacgag cacgcctacc acctcgactt cggcgcgaac
     3661 ccgaccgctt acatcgcctc cttcatgcgc aacatcgagt ggaacgcggt gcaaggtcgc
     3721 ttcgaggacg caatcaaggt cgccccgccg cggccgctcg agcagaagca gtttggcgac
     3781 ctgccgtccg tcaccgtcga acaagtggcg gcgatgctca aggcgggaac ccccgtccag
     3841 atcatcgatg cgcggcccag gcactacacg accaagtcgc aggacatcat ggagggcgcc
     3901 gtgtggcgcg atcccgagcg cctcgatgaa tggatcggcg agctttccaa gaccgagccg
     3961 gtcgtcacct actgcgtcta cggcttccac gtcggatgcg aaacggccat cacgctgcgc
     4021 aacgccggct tcgatgcgcg ctacatggcc ggtggccact acgcctggaa ggcgatcaag
     4081 ggccccgtga agctctttga ataacgaagc tctagcggag gaaatcaaat gtcttttcat
     4141 gctcgcccca tctcgttcaa gccgatgcgg cttcacgggc tctccacccg cctgatcgcc
     4201 agccactatg agaacaacta cggcggggcc gtacggcggc tgaacgcgat ccgcgatgaa
     4261 ctcgccatcc tcgatccggc gacggcgccg ggctttcgcc tgaacgggct gaagcgcgag
     4321 gagctgatcg ctaccaactc catgatcctg cacgaggcct atttcgaagc cctgggcgag
     4381 gccggcggcg gtgatccgac gggcgccctc gcagaggcga tcgcgcgcga cttcggctcg
     4441 ctcgccaagt ggcgcgccga gttcgtcgcc atgggcaagg cggtgggcgg cggctcgggc
     4501 tgggtgctgc tgacccgctc accgcgcgac ggcacgcttt cgaacgtgtg ggcggccgac
     4561 cacacacacg gcctggcggg cggcacgccg gtgctggcgc tcgacatgta cgagcacgcc
     4621 tatcacatcg acttcggcag caatgccgcg gcctatgtcg atgccttcat ggccaacatc
     4681 gcctggggcc gcgtcgccgc ccgcttcgcg gggacctcgc cggcaaagag tccgcatagc
     4741 gtcgatgcag cgaccgcgcg cgccatgctc gaggccgatc cgaacctgct ggtgatcgac
     4801 gcccgcttgc ccgatgacgc ggcttccgtg ccggtcggcc tgcggggcgc ccggcgcgcg
     4861 ccacccgaca gggtcgacgc ggtggcggcg tcgctgccgc gcggcgccaa ggccctcgtc
     4921 tactgcgcct ggggcttcga gatcggcggc gactgcgccg ccaagctgcg cgaacgcggc
     4981 atcg
//
LOCUS       DASWGA010000434         2236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2080399, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000434 DASWGA010000000
VERSION     DASWGA010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2080399"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..1443)
                     /locus_tag="VF991_10360"
     CDS             complement(187..1443)
                     /locus_tag="VF991_10360"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEX9556888.1"
                     /translation="MSVTYTGPYKKGDIKKVVLAYSGGLDTSVILKWLQTTYGCEVVT
                     FTADLGQGEELGPARKKAEMLGIKPQNIFVDDVREEFVKDFVFPMFRANALYEGQYLL
                     GSSIARPLIAKRQIEIARELGADAVAHGATGKGNDQVRFELTYYALKPDIKVIAPWRE
                     WELSSRTKLLEFAEKHQIPIAKDKRGEAPFSIDANLLHSSSEGKILEDPWEEADESVY
                     QRTISPEEAPDKATYITIDFERGDAVAVDGKKLSPAALLTRLNELGRANGIGRLDLVE
                     NRFVGMKSRGIYETPGGTILHAAHRGIESITLDRGAGHLKDELMPKYAELVYFGFWYS
                     PEREMLQALIDKSQENVTGTVRLKLYKGNTAVVGRKSLQSLYSMQHVTFEEDQGAYNQ
                     RDAEGFIKLNALRLRLRALGQGGAKK"
     gene            1553..>2236
                     /locus_tag="VF991_10365"
     CDS             1553..>2236
                     /locus_tag="VF991_10365"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9556889.1"
                     /translation="MVSTLDRLTYAARQTARVAWYAGHYAAGRRLLKPMPKPAFPIGP
                     TPSRAEMTADMRALFEREWQDIAAGRFPAPRARGPEPAEFLRRSLLYFRDLPQVDARR
                     HGALNGELPPGQQGDGLPEYYRQNFHFQSDGWLSDHSAAIYDTQVEVLFTGAADVMRR
                     RAFRPIAQWMAGRNQRDLRGLDVGCGTGRLLAFLHDAWPGLRLTGLDLSVPYLTEARR
                     LIGRTARVKL"
BASE COUNT          361 a          742 c          721 g          412 t
ORIGIN      
        1 cgcgtcacca gccagaacac cgccatcgag gcgagccacg ccgcgacgtc gaaaacggca
       61 tggatgtagg ggaggccgaa atagctcatg aggccaagac cgacattacg acaatcctgt
      121 catcccgagc gaagcgaggg atgacagtgt ctttgtcgtc cacataccct gtaacgacgc
      181 atgccgttac ttcttcgcgc cgccctgtcc caaggcgcgc agccgcagtc ggagcgcatt
      241 gagcttgatg aagccttcgg cgtcgcgctg attgtaggcg ccctggtcct cctcgaaggt
      301 gacgtgctgc atggaataga gcgactggag cgacttgcgg ccgaccaccg cggtgttgcc
      361 cttgtagagt ttcagccgca ccgtgccggt cacattctcc tggctcttgt ctataagcgc
      421 ctgcagcatc tcgcgctcgg gcgaatacca gaagccgaaa tagaccagct cggcgtattt
      481 cggcatcagc tcgtccttga gatggccggc gccgcggtcg agcgtgatcg attcaatgcc
      541 gcgatgggcg gcgtgcagga tggtgccgcc cggcgtctcg tagatgccgc ggctcttcat
      601 gccgacgaag cgattctcga ccaggtcgag gcggccgatg ccgttggccc tgccgagctc
      661 gttcagccgg gtgagcagcg ccgccggcga cagcttcttg ccgtcgacgg ccacggcatc
      721 gcccctctcg aaatcgatcg tgatgtaggt cgccttgtcg ggcgcctcct cgggcgagat
      781 cgtgcgctgg tagacgctct cgtcggcctc ctcccacgga tcctccagga tcttgccctc
      841 gctggaggag tgcaggaggt tggcgtcgat cgagaacggc gcctcgccgc gcttgtcctt
      901 ggcgatcggg atctggtgtt tttcggcgaa ctccaggagc ttggtgcgcg aggagagctc
      961 ccattcgcgc cacggcgcga tcaccttgat gtcgggtttc agcgcatagt aggtgagctc
     1021 gaagcgcacc tgatcgttgc ccttgccggt ggcgccatgc gccacggcat cggcgccgag
     1081 ctcgcgggcg atctcgatct ggcgcttggc gatcagcggc cgggcgatcg agctgccgag
     1141 caggtactgg ccctcgtaga gtgcgttggc gcggaacatc gggaagacga agtccttgac
     1201 gaactcctcg cgcacatcgt cgacgaagat gttttggggc ttgatgccca gcatctcggc
     1261 ttttttacgc gccggtccca gctcttcgcc ctgccccagg tcggcagtga aggtcacgac
     1321 ctcgcagcca taggtcgtct gcagccactt caggatgacc gacgtgtcga ggccaccgga
     1381 ataggccagg acgaccttct tgatgtcgcc cttcttgtag ggtccggtat aagtaacgct
     1441 catggctgac ggctttcgtg acgattcggt aaaggcgcgc gaatatagcg gccgaccccg
     1501 gccgggcaag ccgccgcaaa gccgctataa tgttttctca agtacgtaag acatggtttc
     1561 caccctagat cgtctcacct atgccgcgcg ccagaccgcg cgggttgcct ggtatgccgg
     1621 ccactacgcg gcgggccggc gtctgctgaa gcccatgccc aagcccgcgt tcccgatcgg
     1681 gccgacgccg tcgcgcgccg agatgacggc cgacatgcgc gcgctgttcg agcgcgaatg
     1741 gcaggacatc gcggccggcc ggtttcccgc accccgcgcg cgcggaccgg agccggccga
     1801 gtttttgcgc cgcagcctgc tttatttccg cgacctgccg caggtcgatg cgcggcgcca
     1861 cggcgcgctc aacggcgagc tgccacccgg ccagcagggc gacggcttgc ccgagtacta
     1921 ccggcagaac ttccacttcc aaagcgacgg ctggctcagc gaccactccg ccgcgatcta
     1981 cgacacccag gtcgaggtgc tgttcaccgg cgccgccgac gtcatgcgcc gccgcgcctt
     2041 tcggccgatc gcccaatgga tggccgggcg caaccagcgc gacttgcgcg gcctcgacgt
     2101 gggctgcggc accggccggc tgctggcctt cctgcacgat gcctggcccg gtctgcgcct
     2161 cacgggtctc gatctcagcg tgccgtatct gacggaggcg cgacgcctga tcggccgcac
     2221 ggcgcgggtg aagctg
//
LOCUS       DASWGA010000435         5128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2329746, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000435 DASWGA010000000
VERSION     DASWGA010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5128
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2329746"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VF991_10370"
     CDS             <1..301
                     /locus_tag="VF991_10370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEX9556890.1"
                     /translation="FNSRREQLGALSLRHAVPTIYQGRTFAAAGGLAGYGADLADSYR
                     QAGVYAGRILKGEKPGDLPIQQATKIDLVVNLKTARALGLTMPPSILARADEVLE"
     gene            458..1297
                     /gene="kynA"
                     /locus_tag="VF991_10375"
     CDS             458..1297
                     /gene="kynA"
                     /locus_tag="VF991_10375"
                     /EC_number="1.13.11.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase"
                     /protein_id="HEX9556891.1"
                     /translation="MTGAPFDPFEDGATTNFRGRMSYGGYLCLDKLLTAQQPLSSAHD
                     ELLFIIQHQTSELWMKLAIHELNATCRQIADDDLQPAFKMLSRVSRIFEQLNSAWDVL
                     RTMTPSEYTQFRATLGQSSGLESHQYRMIEYLVGNKNPAMMRPHEHDSVLLARLDAVR
                     QAPSLYDLTIRALHRRGFAIDEAVLKRDVAVTHVADDSVRAAWATVYHDPLRFWELYE
                     LAEKLVDFEDYFRRWRFNHVTTVERVIGFKRGTGGTSGVSYLRRMLDVVLFPELWQVR
                     TAL"
     gene            1294..2139
                     /locus_tag="VF991_10380"
     CDS             1294..2139
                     /locus_tag="VF991_10380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008121078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556892.1"
                     /translation="MIADRPAPDPAVDWDDAYANTPYIPQGSTYPARWIERATAFREA
                     LTAAGKARTDLAYGPAPRNRLDLFLPDADCKGLVVFVHGGFWKAFDKSSWSHLAKGSI
                     DSGYAVAMPSYSLCPEARISDITQEIAGAIDHAATQVAGDILLCGHSAGGHLVTRMVC
                     QASPLGAATASRIARTVSISGLHDLRPLLATRMNDVLRLDREEAKRESPALLVPRPRQ
                     TVTCWVGAEERPEFVRQNRLLAETWNGFDARMAIVEEPDRHHFNVIDGLTEANHPLAQ
                     ALLVG"
     gene            2221..2442
                     /locus_tag="VF991_10385"
     CDS             2221..2442
                     /locus_tag="VF991_10385"
                     /inference="COORDINATES: protein motif:HMM:NF042599.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase-like helix-turn-helix
                     domain-containing protein"
                     /protein_id="HEX9556893.1"
                     /translation="MNQDCYLNPHQARDREPDAYQNLLGDAIERCYAAGIHDLAGLVD
                     GLNEARVPAPNGQPWTADLFVQEMKRLGA"
     gene            2472..3506
                     /locus_tag="VF991_10390"
     CDS             2472..3506
                     /locus_tag="VF991_10390"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX9556894.1"
                     /translation="MTAVTNQTIGKLLAKGVRNIWYPICPSHFLGDKPISLRRLGLKL
                     VLWRDETGGCAMLEDHCPHRGAPLSMGIPMGDRIACGYHGVQVRKDGTVMAVPGSPGS
                     KLEGRNCVKSFPTQEHNGVIFGYFGDALHPEPIALQLPEQLASPDYSSFLCYCEWRGD
                     YRYVYDNVMDPMHGTFLHRQSHSMSFGDTTATFRTRETPSGFVFEKEGQRNVNFDWTE
                     FLDTGAHWLRLEIPYPATGGPGGNFHIVGVYTPIDERRCAVFHWRCRKVDGWQRDTWR
                     FLYKNRLEARHWAVLEQDRAMLEQFEPDANSRENLYQHDMGVARLRRVFRTKAEAQLK
                     ALEAAGHAVQ"
     gene            3512..4420
                     /locus_tag="VF991_10395"
     CDS             3512..4420
                     /locus_tag="VF991_10395"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9556895.1"
                     /translation="MPGIEGIDRVTYGVEDLAACQRFFLDWGLKLVREHAAGLDFESL
                     NGCELLVRKSDDPSLPPAVEPGSTLREVIWGVRGEPDLEALRTRGLRERDSVLVGVDP
                     NGIGLGFRVTRKRAVDVAGTPANVWGHAARIDQPSPVYERAEPVEVGHVVFFTDALDE
                     TTEFYQALGFHLSDRYPGRGHFLRCSARGGHHDLFLLQTPEAKRGLNHVAFTVRDLHE
                     VIGGGLHMSRCGWETQLGPGRHPISSALFWYFKSPAGALVEYYADEDVLTENWQPRDF
                     QPSPTMFAEWAIAGGIDGNTRRQRQG"
     gene            4424..>5128
                     /locus_tag="VF991_10400"
     CDS             4424..>5128
                     /locus_tag="VF991_10400"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556896.1"
                     /translation="MSSSPRLEFRDVSKRFANPRQGAVVVAVEGVTLSIADGEVVSLI
                     GPSGCGKSTLLNMGAGLDPVSSGQVHVDAELVTRPNRHVAFMLQKDLLLPWRTIVENV
                     ELGQEIQGVAGRERRRRALDLLAKCRLSDFVDHYPHQLSGGMRQRAALARTLAVDPSV
                     LLMDEPFSALDAQTKMVLQQDLGRTLADTGKTALFITHDLIEAVALSDRILVMSQRPG
                     RIIEEITVDIGDRDNPM"
BASE COUNT          890 a         1694 c         1658 g          886 t
ORIGIN      
        1 cttcaacagc cggcgcgagc agctcggcgc gctgagcctc cgccacgcgg tgccgacgat
       61 ctaccagggc cgcacgttcg ccgcggccgg cggcctggcg ggctacggag ccgatcttgc
      121 ggactcgtat cgtcaggccg gcgtctacgc cggccgaatt ctcaagggcg agaagccggg
      181 cgacctgccg atacagcagg ccacgaaaat cgatctggtc gtcaatctca agaccgccag
      241 ggcgctcggg ctcaccatgc cgccgtcgat cctcgcgcgc gccgacgagg tgctggaatg
      301 atgagaatcg aatgagatgg cggcaactcg cggtgcttga ggggcagcct gcgcccgtcg
      361 agccatacgc gctcgccgcc accacctgag tcgggcaaac cgctagacga cggcgctgtt
      421 ccttcacatc atgattgaag ggctatagag gtccaatatg actggagctc ccttcgaccc
      481 ctttgaagac ggcgccacga cgaactttcg cggacgcatg tcctatggcg gctacctctg
      541 tctggacaag ctgctgacgg cgcagcagcc gctttcctcg gcgcatgatg aattgctgtt
      601 catcatccag catcaaacgt ccgagctctg gatgaagctc gccatccacg aattgaacgc
      661 cacctgccgg caaatcgccg acgacgacct gcagccggct ttcaagatgc tgtcgcgcgt
      721 gtcgcgcatc ttcgagcagt tgaactcggc ctgggacgtg ctgcgcacca tgacgcccag
      781 tgaatacacg cagtttcgcg caacgcttgg gcagtcctcc ggcctggagt cgcaccaata
      841 ccgcatgatc gaatatctcg tcggcaacaa gaacccggcg atgatgcgcc cgcacgagca
      901 tgacagcgtg ctgctggcgc ggttggacgc cgttcgccag gcgccgagcc tgtacgatct
      961 cacgatacga gcgctgcaca ggcggggctt tgcgatcgat gaggccgttc tcaagcgtga
     1021 cgtcgcggtg acgcacgtcg ccgacgacag cgtgcgtgcc gcctgggcga ccgtctatca
     1081 cgatccgctg cgtttctggg agctctacga gctcgccgag aagctggtcg acttcgagga
     1141 ctatttccgc cgatggcgct tcaatcacgt caccaccgtg gagcgggtga tcggtttcaa
     1201 gcgcggcacc ggcggtacgt cgggcgtttc gtatctgcgc cggatgctcg atgtggtgct
     1261 ctttcccgag ctttggcagg tcaggacggc gctgtgatcg cggaccgtcc ggcgcccgat
     1321 ccggccgtcg attgggacga cgcctacgcc aacacgccct atatcccgca agggtcgacc
     1381 tatccggcac gctggattga acgcgccaca gcctttcgcg aggcgttgac ggcagcgggc
     1441 aaggcgagaa ccgacctcgc ctacggtccg gcgccgcgca accggctgga tctgtttttg
     1501 cccgacgcgg attgcaaagg gcttgtcgtc ttcgtgcacg gcggtttctg gaaggcgttc
     1561 gacaagtcct cgtggtcgca cctcgccaag ggttcaatcg attcaggcta tgcggtggcc
     1621 atgccctcct attcgctctg ccctgaagca cgcatttccg acatcacgca agagatcgcc
     1681 ggtgcgatcg accatgccgc gacgcaagtg gcgggcgaca tcctgctgtg cggccattcg
     1741 gccggtggcc atcttgtcac ccgcatggtc tgccaggcct cgcctctcgg cgctgcgacg
     1801 gcgtcgcgaa tcgcgcgaac cgtctcgatc tccggcctgc acgatctgcg gccgctgctg
     1861 gcgacaagga tgaacgacgt tttgcgcctc gatcgggagg aggccaagcg ggagagccct
     1921 gctttgctcg tgccgcggcc gcgccagacg gtcacctgct gggtcggcgc cgaggaacgt
     1981 ccggaattcg tgcgccagaa ccgcctgttg gcggagacat ggaacggctt tgacgcgcgg
     2041 atggcgatcg tcgaagagcc cgaccggcat cacttcaatg tcatcgacgg gctcaccgag
     2101 gccaaccacc cgctggccca ggcgctgctc gtggggtgag ggtttacaac agcctggcgg
     2161 gtctctagct tagttcaaat agaaacccat gttttactaa tgaaaaattg gaggcgagcg
     2221 atgaaccagg attgctacct caatccccat caggcgcgcg accgcgagcc cgacgcctat
     2281 cagaacctgt tgggcgacgc gatcgagcgc tgctacgccg ccggcatcca cgacctggcg
     2341 ggcctggtcg atgggctgaa cgaggcgcgc gtgccggcgc cgaacggcca gccgtggacc
     2401 gcagacctgt tcgtccagga gatgaagcgc ctcggcgcct agccaaccga cattcatcca
     2461 aggaacgcgc catgaccgcg gtgaccaacc agacaatcgg caagcttctc gccaagggcg
     2521 tgcgcaacat ctggtacccg atctgcccgt cgcatttcct cggcgataag ccgatttcgc
     2581 tccggcgcct ggggctgaag ctggtgctgt ggcgcgacga gacgggcggc tgcgccatgc
     2641 tcgaggatca ttgcccccat cgcggcgcgc cgctctccat gggcatccca atgggcgatc
     2701 gcatcgcctg cggctatcac ggcgtgcagg tgagaaagga cggcaccgtc atggccgttc
     2761 ccggcagccc gggcagcaag ctcgagggca ggaactgcgt aaaatcgttc ccgacgcagg
     2821 agcacaacgg cgtcatcttc ggctatttcg gcgacgcgct tcatcccgag ccgatcgcgc
     2881 tgcaactgcc cgagcagctc gcctcgccgg actacagttc cttcctctgc tactgcgaat
     2941 ggcggggcga ctaccgctac gtctacgaca acgtcatgga ccccatgcac gggacgttcc
     3001 tgcaccgcca gtcgcattcc atgtcgttcg gcgacaccac ggcgacattc cggacccgcg
     3061 agacacccag cggcttcgtc ttcgagaagg aaggccagcg caacgtcaac ttcgactgga
     3121 cggaattctt ggacaccggc gcacactggc tgcggctgga aatcccctat cccgccaccg
     3181 gcggtcccgg tggcaatttc catatcgtcg gcgtctacac gccgatcgac gagaggcggt
     3241 gcgccgtctt ccactggcgc tgccgcaagg tcgacggctg gcagcgcgac acctggcggt
     3301 tcctctacaa gaaccggctg gaggcgcggc attgggcggt tctcgaacag gaccgggcga
     3361 tgctcgagca gttcgagccc gacgccaact cgcgcgaaaa tctctaccag cacgacatgg
     3421 gcgtcgcccg cctgcggcgt gtctttcgga ccaaggccga agcgcaattg aaggcgctgg
     3481 aagccgcggg ccacgcggtg cagtgagcgc catgcccggc atcgaaggca tcgaccgcgt
     3541 cacctacggc gtcgaggatc tggccgcgtg ccagcgcttc ttcctcgatt gggggctcaa
     3601 gctggtgcgt gagcatgcgg cgggcctcga cttcgaaagc ctcaatggct gcgagctttt
     3661 ggttcgcaag tccgacgatc cgtcgctgcc gcctgcggtg gagccaggat cgacgctgcg
     3721 cgaagtgatc tggggtgtcc gcggcgagcc tgacctcgag gcgctccgta cgcgcggact
     3781 tcgcgaacgc gacagcgtgc ttgtgggagt cgatcccaac ggcatcggcc tgggctttcg
     3841 tgtcacccgc aagcgtgccg tcgatgtcgc cggcacaccg gccaacgtct ggggccatgc
     3901 cgcgcgcatc gaccagccga gcccggtcta cgagcgcgca gagccggtcg aagtggggca
     3961 tgtcgtcttc ttcaccgacg ccttggacga gaccacggaa ttctaccagg cgctgggctt
     4021 ccatctgtcg gaccgctatc ccggccgcgg ccatttcctg cgctgctcgg cgcgcggcgg
     4081 ccaccacgat ctctttctgc tgcagacgcc ggaggccaaa cgcggcctca atcacgtggc
     4141 cttcacggtg cgcgacctgc atgaggtgat cggcggcggc ttgcacatgt cgcgctgcgg
     4201 ctgggagacc cagctcgggc caggccggca tccgatctcg tcggcgctgt tctggtactt
     4261 caagagtccg gccggcgccc tggtcgagta ctacgccgac gaggacgtgc tgaccgagaa
     4321 ctggcagccg cgcgacttcc agccgagccc gaccatgttc gccgagtggg cgatcgccgg
     4381 cggcatcgac ggcaacacgc ggcgccagag gcaggggtaa cagatgtcga gcagcccccg
     4441 cctcgaattc cgcgacgtct ccaagcgctt cgccaatccg cggcaaggtg ccgtcgtcgt
     4501 cgccgtcgaa ggggtgacgc tgtcgatcgc cgacggcgag gtggtgtcgc tgatcggacc
     4561 ctcgggctgc ggcaagagca cgttgctcaa catgggggcg gggctcgatc cggtgtcgtc
     4621 ggggcaagtc cacgtcgacg ccgagcttgt cacgcggccc aaccgccacg tcgccttcat
     4681 gctgcagaag gacctgctgc tgccgtggcg gacgatcgtc gagaatgtcg agctcggcca
     4741 ggagatccag ggcgtggcgg gtcgcgagcg ccggcggcgg gcgctcgacc tcttggccaa
     4801 gtgccggctg agcgacttcg tcgatcatta tccgcaccag ctttcgggcg gcatgcgcca
     4861 gagggcggcg ctggcgcgga cgctggcggt cgatcccagc gtgctgctga tggacgagcc
     4921 gttctcagcc ctcgatgccc agaccaagat ggtgctgcaa caggatctcg gccggacgct
     4981 ggccgacacc ggcaagacgg cgctgttcat cactcacgat ctcatcgagg cggtggcgct
     5041 gtcggaccgc atcctggtga tgagtcagcg cccgggccga atcatcgagg aaatcacggt
     5101 cgatatcggc gatcgcgaca atccgatg
//
LOCUS       DASWGA010000436         1723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1572010, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000436 DASWGA010000000
VERSION     DASWGA010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572010"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VF991_10405"
     CDS             <1..259
                     /locus_tag="VF991_10405"
                     /inference="COORDINATES: protein motif:HMM:NF016432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HEX9556897.1"
                     /translation="RRQATQPIDEVPEALLGVEDRHVEKLKIPQGLLTERQILILKCL
                     YDEERDVADVAQLLRIDAQTVRSTHHKALLRLRAHFGEEPP"
     gene            376..849
                     /locus_tag="VF991_10410"
     CDS             376..849
                     /locus_tag="VF991_10410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556898.1"
                     /translation="MSVPITDLEFAAWLEGRLPEWEAARIEAAVAGDPEMRRAALELA
                     DILGKPLPQAPARLEVRARTLVGFAVEKRFEQPVEPPAPSRVSLFDWLFAWNRNFALQ
                     RAVTLTAAVLLAVSGFMVGGGLSETLAAERYAKNWQTTDPYSSNELTDFLALDSI"
     gene            850..1383
                     /locus_tag="VF991_10415"
     CDS             850..1383
                     /locus_tag="VF991_10415"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic heavy metal sensor"
                     /protein_id="HEX9556899.1"
                     /translation="MSSRLLLQVLLALSLMLNAFVLAGFVYRSWIEPPPLERSAPSPP
                     PGQRPSALETVTHDLNLDDRQRQALHGVFDQYAMMRRDRQREIQKLREQIAAEYKRPT
                     IDMARVEVLIDQLTGLRAQQQKDTLRSFAQLESQLKPEQRERLHQILAERLAVPYYGR
                     PPGGGPPGQGQGRPPPQ"
     gene            1394..>1723
                     /locus_tag="VF991_10420"
     CDS             1394..>1723
                     /locus_tag="VF991_10420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556900.1"
                     /translation="MVSAIGRRGFVGGAAALSAGLWLPLPGRAASAMDFDEARHLLSR
                     TSFGATPAEIRALEAQDYAAAVDRLLAGVRREAMTPPPGWLGEGPAELRRRQQAAQAE
                     RASAERKP"
BASE COUNT          296 a          570 c          573 g          284 t
ORIGIN      
        1 ccgccggcag gccacccagc cgatcgacga ggtccccgaa gccctgttgg gcgtcgagga
       61 ccgccatgtg gaaaaactca agattcctca aggacttctg accgagcgtc aaattctgat
      121 cctgaaatgc ctatatgacg aggagcggga cgtggccgac gtcgcccaac ttctcaggat
      181 cgacgcccaa accgttcgca gcacacatca taaagcgttg ttgcggctgc gagcccattt
      241 tggggaagaa cccccctgaa caggggatgc ctgacgggtt tatgacgtaa cctgcagcag
      301 gagagcgcga tgagcacgga gcggaccaac ccaagcgaca aggagctgtg gcgaagcttt
      361 gtcacaggcc cagtcgtgtc cgttcccata accgatctcg agttcgcggc atggctggaa
      421 ggccggttgc ccgaatggga ggcggcacgc atcgaagcgg ctgtcgccgg cgatcctgaa
      481 atgcggcggg ccgccctgga gctggccgac atcctcggta agccattgcc gcaggcgcct
      541 gcccgcctgg aagtgcgtgc gcggacgctg gtcggcttcg ccgtcgagaa acgcttcgaa
      601 cagcctgtcg agccgcctgc gccaagccgc gtcagcctgt tcgactggct gttcgcctgg
      661 aaccgcaact ttgccctgca acgcgccgtc accttgaccg ccgccgtctt gctcgcggta
      721 tcgggcttca tggtgggcgg cggtctcagc gagacgctgg ctgcggagcg ctatgccaag
      781 aattggcaaa ccaccgatcc ctacagctcc aacgaattga ccgatttcct ggccttggac
      841 agcatctaga tgtcctcccg tctgctgctg caggttctgc tggcgctgtc gctgatgctg
      901 aacgcgtttg tgctcgcggg cttcgtctat cggagctgga tcgagccgcc gccgctcgag
      961 cgctctgcgc catcgccgcc gccggggcag cgccccagcg cgctcgaaac ggtgacgcac
     1021 gaccttaacc tcgacgaccg gcagcgccag gcgctgcacg gtgtgttcga tcaatacgcc
     1081 atgatgcggc gcgaccggca gcgcgagatc cagaaattgc gcgagcagat cgcggccgag
     1141 tacaagcggc cgaccatcga catggcgcgc gtcgaggtgt tgatcgatca gctcactggg
     1201 ctgcgcgccc agcagcagaa ggataccttg cgctcgtttg cccagctcga gagccagctc
     1261 aagcccgagc agcgcgaacg cttgcaccag attctggcgg agcgccttgc cgtaccgtac
     1321 tacggacggc cgcctggtgg cggccctccg ggacaaggac aaggacgtcc gccgccgcaa
     1381 taggagcagc gccatggtca gtgcgatcgg tcggcgtggt ttcgtcggag gtgcggcggc
     1441 actgtccgcc ggcctgtggt tgccgctgcc gggacgcgcc gcttcggcga tggatttcga
     1501 cgaggcgcgt catctgctgt cgcgcacctc gttcggcgcg acgccggccg agatccgcgc
     1561 tttggaagcg caggactatg ccgctgcggt cgaccgcctg ctggccggcg tgcggcgcga
     1621 ggccatgacg ccgccgccgg gctggctggg cgaggggccg gccgagctgc ggcgccgcca
     1681 gcaggccgcg caggccgaac gcgcttcggc cgaacgcaag ccc
//
LOCUS       DASWGA010000437         5094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1816501, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000437 DASWGA010000000
VERSION     DASWGA010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5094
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1816501"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..505
                     /gene="moaB"
                     /locus_tag="VF991_10425"
     CDS             <1..505
                     /gene="moaB"
                     /locus_tag="VF991_10425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HEX9556901.1"
                     /translation="AVLTVSDTRTLETDKSGDTLVERIARDGHVLADRAIVTDDVAFI
                     RAQVKKWVDDPAIEAVITTGGTGVTGRDVTPEALEGLFEKRIEGFGEVFRWISFQKIG
                     TSTMQSRAIAGVANATYIFALPGSTGACKDGWDDILRQQLDIRFRPCNFAELMPRLNE
                     GKMPRSG"
     gene            590..1609
                     /locus_tag="VF991_10430"
     CDS             590..1609
                     /locus_tag="VF991_10430"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HEX9556902.1"
                     /translation="MNDSLLAALRERPAFAALTASDLQPLPATGTAHGHLRLPGGLLA
                     RVAYAHEGDPTAVARLLAQAAAFRHLAPAGHTPGLHDVIEPRPDLPGGALIVDFIEGR
                     APRLPDELAAIANTLVHIHSLPTARVPIPRQKNPFIETLEAIEQNAMRFLDKAVPDSG
                     ARAEIAEELRLMRGMALAFAQRDQPLTVALADTHPGNFIVDRAGTAWFIDLEKVHVGS
                     PAIDLAHATLATSTLWHPAVGKVLSPGEVKGFYDAYFEKVGPGQAALLAPWVVPMRRL
                     TWLRTTLFMARWRVQTRNPRDPADPTQWSDAGLEPAMKAHIDAHIDQCFRRETIQSIR
                     AEWTA"
     gene            1643..2797
                     /locus_tag="VF991_10435"
     CDS             1643..2797
                     /locus_tag="VF991_10435"
                     /inference="COORDINATES: protein motif:HMM:NF033668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HEX9556903.1"
                     /translation="MRPTVPPDYPDDPIAEPAHRGRGALSNESSRYDSERRIRTTDGW
                     EQGTSAAEPDDELPPLRTTLTRDATRTIIARNTSPDIGFDRSINPYRGCEHGCIYCFA
                     RPTHAYLGLSPGLDFETKILFKPDAAKLLVAELASPKYRPDVIAMGTNTDPYQPVERE
                     LKITRQILQVLSDFNHPVGIVTKGQLITRDIDILGDMAKRNLAEAFVSVTTLDKELAR
                     AMEPRASAPHRRLEAIRALSAAGIPTGVMTAPMIPGLNDHEMESILEAAKEAGATRAG
                     FTVLRLPLEIKDLFQEWLRQHRPDRAERVLSLIRQMRGGALYQAEFGLRMRGEGPIAQ
                     LLSARFAAAVKRLDLNRVRYRLDTGRFHVPESARTALVDAKRDARQMKLL"
     gene            complement(2921..3421)
                     /locus_tag="VF991_10440"
     CDS             complement(2921..3421)
                     /locus_tag="VF991_10440"
                     /inference="COORDINATES: protein motif:HMM:NF017820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX9556904.1"
                     /translation="MKQLRAVRTLALPDWCIAAGFVRNRVWDHLHGIVPARPPVDIDV
                     LYFDAADVSKEREAGYEKRLEGLLPGAPWQVRNQARMHVWKDLPPHRSTADAMTYWLE
                     TVTAVGVRLEADDRLTVVAPLGTDDLLGLRCRPTAFGRTRRDEYEARIAAKRWRELWP
                     KVRFLD"
     gene            3493..4101
                     /locus_tag="VF991_10445"
     CDS             3493..4101
                     /locus_tag="VF991_10445"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004448151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEX9556905.1"
                     /translation="MPSFRFELLCEGRVAGIDEAGRGPLAGPVVAAVAVIDRAAAKRK
                     LLKLINDSKQLVVGDREAAYEAMVASGIVQFAVAEATVEEIDCFNILQATFMAMRRAL
                     QALAEQPDVVLIDGDRAPPRLGCRAETIVGGDARSYSIAAASIFAKVTRDRYMARLAE
                     TFPGYGWETNRGYGTDEHLSALEKLGPTPHHRMSFSPLNRLL"
     gene            4106..4726
                     /locus_tag="VF991_10450"
     CDS             4106..4726
                     /locus_tag="VF991_10450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9556906.1"
                     /translation="MLKLYYAADTCSLATHIVLEEAGADYSTVRIDFATGQQRSPDYL
                     AVNPKGRVPALVTDRGILTETPAMLVFVAQSFPAARLAPVDDAFAFAEVQAFNSYLCS
                     TLHVAHAHRMRGHRWADDEAAIAAMQRKVPQSVGACYELIERDLLKGPWVMGEHYTIC
                     DPYLFTLAQWLEQDGVDSNRIPRVADHRRRVSERAAVRKAIAEELA"
     gene            4822..>5094
                     /locus_tag="VF991_10455"
     CDS             4822..>5094
                     /locus_tag="VF991_10455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009451337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HEX9556907.1"
                     /translation="MTHLPPMRGEKLDRVLVGDCIELMGGLPEGSVDMVFADPPYNLQ
                     LGGELLRPDNSRVDAVDDDWDKFDGFARYDSFTRAWLGAARRVLRPE"
BASE COUNT          842 a         1782 c         1635 g          835 t
ORIGIN      
        1 cgccgtgctg acggtatccg acacccgcac gctcgagacc gacaagtcgg gcgacaccct
       61 ggtcgagcgc atcgcccgcg acggccatgt gctggccgac cgcgccatcg tcaccgacga
      121 cgtggccttt atccgcgccc aggtgaagaa gtgggtcgac gatcccgcga tcgaggcggt
      181 gatcaccacc ggcggcaccg gcgttaccgg ccgcgacgtc acgcccgagg cgctggaagg
      241 cctgttcgag aagcgcatcg agggcttcgg cgaggtcttc cgctggatca gcttccagaa
      301 gatcggcacc tcgaccatgc agtcgcgggc catcgcgggc gtcgccaacg ccacctacat
      361 cttcgcgctg cccggctcga ccggcgcctg caaggacggc tgggacgaca tcttgcgcca
      421 gcagctcgac atccgcttcc ggccctgcaa cttcgccgag ctgatgccgc gcctgaacga
      481 aggcaagatg ccgcgcagtg gttgagtctt tgctgggagc gcgccactcc gtggcgcaat
      541 cttcctgtgt atacgacaag gagcgccacg gagtggcgcg ctcccagcaa tgaatgattc
      601 cctgctggct gccctgcgcg agcggccggc attcgccgct ttgacggcga gtgatctgca
      661 gccgttgccc gcgaccggca cggcgcatgg gcacctgcgc ttgccgggcg gcctgctggc
      721 gcgcgtcgcc tatgcgcacg aaggcgatcc gacggcggtc gcgcgactgt tggcacaggc
      781 ggcggcgttt cgccatctcg cgccggcggg acacacgccg ggcctgcatg acgtgatcga
      841 accgcgcccg gacttgccgg gcggcgcgct gatcgtcgac ttcatagaag gccgcgcacc
      901 gcgactcccc gacgaactgg cggcaatagc caacaccctg gtgcacatcc attcactgcc
      961 tacggcgcga gtgccgattc cgcgccagaa gaatcctttc atcgagacgc ttgaagcgat
     1021 cgagcagaat gccatgcgct tcctcgacaa ggccgtgccc gattccgggg cgcgcgccga
     1081 gatcgccgag gagcttcgcc tgatgcgcgg catggcgctg gccttcgccc agcgcgatca
     1141 gccgctcacc gtggcgctgg ctgacaccca tccgggcaac ttcatcgtcg atcgcgccgg
     1201 aacggcgtgg ttcatcgatc tggagaaagt ccatgtcggc tcgccggcga tcgatctcgc
     1261 gcatgcaacg ctggcaacct cgacgctctg gcatcccgct gtcggcaaag tgctgtcacc
     1321 tggcgaggtg aagggctttt acgacgcata ctttgagaag gtggggccgg ggcaggctgc
     1381 tcttcttgcg ccttgggtcg tgccgatgcg ccgcctgacc tggctcagga ccacgctttt
     1441 catggcgcga tggcgggttc agacccgcaa cccgcgcgat ccggctgacc cgacacaatg
     1501 gagcgacgcc gggctggagc ctgccatgaa ggcgcacatc gatgcgcaca tcgatcaatg
     1561 cttccgccgc gagactattc aatcgatccg agccgaatgg accgcttgac tcgttccctt
     1621 tttgttctca gagtcggctc ccatgaggcc gaccgttccg cccgactatc ccgacgaccc
     1681 gatcgccgag cccgcgcatc gcggccgcgg cgcgctgtcg aacgagtcga gccgttacga
     1741 cagcgagcgg cgcatcagga cgaccgacgg ttgggagcag ggcacgtcgg ccgcggaacc
     1801 cgacgacgag ctgccgccgc tgcgcaccac gctgacgcgc gacgccacgc gcaccatcat
     1861 cgcgcgcaac acctcgccgg acatcggctt cgatcgctcg atcaatccct atcgcggctg
     1921 cgagcacggc tgcatctact gcttcgcgcg gccgacccac gcctatctcg gcctctcgcc
     1981 cggcctcgat ttcgaaacca agatcctgtt caagccggat gcggccaagc tcttggtcgc
     2041 cgagctcgcc tcgccgaaat accgccccga cgtgatcgcc atgggcacca acaccgatcc
     2101 ctatcagccg gtcgagcgcg agctgaaaat cacgcgccag atcctgcagg tgttgagcga
     2161 cttcaaccat ccggtgggca tcgtcaccaa gggccagctc atcacccgcg acatcgacat
     2221 tttaggcgac atggccaagc gcaatcttgc cgaggcgttc gtatccgtga ccaccctcga
     2281 caaggagctg gcgcgggcga tggagccgcg cgcctcggcg ccgcaccgtc ggctggaagc
     2341 gatccgcgcc ttgtcggcgg ccggcatccc gaccggcgtc atgaccgcgc ccatgatccc
     2401 ggggctgaac gaccacgaga tggaatcgat cctcgaggcg gcaaaggaag ccggtgccac
     2461 gcgcgcgggc ttcaccgtcc tgcgcctgcc gcttgagatc aaggacctgt tccaggaatg
     2521 gctgcgccag caccggcccg accgcgccga gcgcgtgctg tcgctgatcc gccagatgcg
     2581 cggcggcgcc ctctatcagg ccgagttcgg cctgcgcatg cgcggcgagg gaccgatcgc
     2641 ccagcttttg agcgcccgct tcgccgcggc ggtgaagcgg ctcgatctca accgcgtccg
     2701 ctaccggctc gataccggcc ggttccatgt gccggagtcg gcgcgcaccg ctctggtcga
     2761 cgccaagcgc gatgcgcggc agatgaagct gctttagtgc cgggggctct tctcatgatc
     2821 attcggaccg cgcgcatcct gcgcgctcat gaatcatgag cgcgcaagat gcgcgcggtc
     2881 cggaagacta tgacgcgcca ctggagtggc gcgcccccag ctaatcgagg aaccgcacct
     2941 tcggccacag ctcgcgccag cgcttggcgg cgatgcgggc ttcatactcg tcgcgccgcg
     3001 tgcggccgaa cgccgtcggc cggcaccgca ggccgagcag gtcgtcggtg ccgagcggcg
     3061 ccaccaccgt cagccggtcg tcggcttcca gccgaacgcc gacggccgtc accgtctcca
     3121 gccagtaggt catggcgtcc gccgtgctgc gatgcggcgg cagatccttc cagacatgca
     3181 tgcgcgcctg gttgcgcacc tgccagggcg cgccgggcag caggccctcc aggcgcttct
     3241 cgtagccggc ttcgcgctcc ttggagacgt cggcggcgtc gaaatagagc acgtcgatat
     3301 ccacgggcgg ccgcgccgga acgataccgt gcagatggtc ccacacccga ttgcgcacga
     3361 accccgcggc aatgcaccag tcgggcaaag cgagggtgcg caccgcacga agctgtttca
     3421 tgcccacagg gtcttgggca atgatgcggg cgaccaagga catgctgcac tctaaaggag
     3481 gcggcggggg atatgccgag cttccggttc gaattgcttt gcgaggggcg cgtcgccggc
     3541 atcgacgagg ccggccgcgg accgctggcc gggccggtgg tcgcggccgt cgccgtcatc
     3601 gaccgcgccg ccgccaagcg caagctcctg aagctcataa acgattccaa gcagctcgtg
     3661 gtcggggatc gcgaagccgc ctacgaggca atggtcgcct ccggcatcgt gcaatttgcc
     3721 gtcgccgagg cgaccgtcga ggagatcgac tgcttcaaca tcctgcaggc caccttcatg
     3781 gccatgcgcc gcgcgctgca ggcgctggcc gagcagccgg acgtcgtgtt gatcgacggc
     3841 gatcgcgcgc cgccccggct cggctgccgc gccgagacca tcgtcggcgg cgacgcgcgg
     3901 tcgtactcga tcgccgcggc gtcgatcttc gccaaggtga cgcgcgatcg ctacatggcg
     3961 cggctcgccg agacctttcc cggctacggt tgggagacca accgcggcta cggcaccgac
     4021 gagcatctgt cggcgctaga aaaactcggg ccgacaccgc accaccgtat gagcttctcg
     4081 ccgctcaatc ggctactttg atcgtgtgct gaagctctat tacgccgccg atacctgttc
     4141 gctcgccacg cacattgtcc tggaggaggc cggcgccgac tattcgaccg tgaggatcga
     4201 cttcgccacc ggccagcagc gctcgcccga ctatctcgcc gtcaacccga agggccgcgt
     4261 gccggccttg gtcaccgatc gcggcatcct gaccgagacg cccgccatgc tggtcttcgt
     4321 cgcccagagc ttcccggcgg cgcgcctcgc gccagtcgac gatgccttcg ccttcgccga
     4381 ggtccaggcc ttcaacagct atctctgctc gaccctgcac gtggcgcacg ctcatcgcat
     4441 gcgcggccat cgctgggccg acgacgaggc agccatcgcc gccatgcaac gcaaggtgcc
     4501 gcagtcggtc ggcgcctgct acgagctgat cgagcgcgac ctgctcaagg gaccatgggt
     4561 gatgggcgag cactacacga tctgcgatcc ctatcttttc accctcgccc agtggctgga
     4621 gcaggacggc gtcgattcca atcgcattcc ccgcgtggcc gatcatcggc gtcgggtgtc
     4681 ggagcgcgcc gccgtacgca aagcgatcgc cgaggagctc gcctagggct ggtgggtaac
     4741 ggggatagtg cggactcgat cttgtggatc gatgccataa acaattgaat caattgtaat
     4801 ttcttgaccg cgactcggtg gatgactcat cttccaccga tgcgtgggga gaaactggac
     4861 cgcgtcctgg tcggcgactg catcgagctg atgggcggcc tgcccgaggg ctcggtcgac
     4921 atggtcttcg ccgacccgcc gtataatttg cagctcggcg gcgagctgct gcggccggac
     4981 aacagtcgcg tcgatgccgt cgacgacgac tgggacaagt tcgacggctt cgcgcgttac
     5041 gattccttca cccgcgcctg gcttggcgcc gcgcgccgcg tgctcaggcc cgag
//
LOCUS       DASWGA010000438         1801 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_180061, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000438 DASWGA010000000
VERSION     DASWGA010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180061"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VF991_10460"
     CDS             complement(<1..941)
                     /locus_tag="VF991_10460"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556908.1"
                     /translation="MKRRIFLGLALLPAVSQAQQQPPLIGVMRVNARSAEQFAEPFRR
                     DMARLGWQEGRTYRTHFLWADGDTSRLPAMAAELLKSGAQVIVPFGNAAVAAAQAATK
                     QVPIVGMADDFVGAGLAPSMARPGGNTTGISIMAHELEVKRLEILHEIAPRARHIGVV
                     NDDFNSVKGGIEKLEKGAQSLGLTLTVVQVGTREEIAPGLAALTSARVEAVQVLRSPF
                     LNSQRATFVQRLREMKLPAVYEWPETVEEGGLASYAPRISLCYRHVAVLVSKVLRGAK
                     PADLPIEQPTTFTLAINTGAAQAIGLQVPESLLLRADV"
     gene            complement(986..>1801)
                     /locus_tag="VF991_10465"
     CDS             complement(986..>1801)
                     /locus_tag="VF991_10465"
                     /inference="COORDINATES: protein motif:HMM:NF015177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HEX9556909.1"
                     /translation="LSLWDDGDNFFYDWLVMSNGEATPLRVRSLVGLIPMFAVETADM
                     ALLKNLPSFVRQRDWYLRYRPKLATLVSRWNTPGAADTRMLAITRAFRSTKLLERILD
                     KNEFLSDYGVRSLSRYHLEHPYVFETGDFRSEVKYVPADSDSDLFGGNSNWRGPIWMP
                     INYLIIESLQKFYKFYGDDFRVESPVGSGQTQSLKELADGLRNRLINIFRRNANGRRP
                     VFGTYEKMQTDPHFKDYLLFHEYYDGDNGRGLGASHQTGWSALVANMIAELHD"
BASE COUNT          331 a          566 c          582 g          322 t
ORIGIN      
        1 acatcggcgc gcagcagcag gctctcgggc acctgcaggc cgatcgcctg cgcggcgccg
       61 gtgttgatcg ccaaggtgaa ggtcgtcggc tgctcgatcg gcaggtcggc gggctttgcg
      121 ccgcgcagca ccttgctcac cagcacagcg acgtggcgat agcacagcga tatgcgcggc
      181 gcgtagctcg cgagcccacc ctcctcgacg gtctccggcc attcgtagac ggccggcagc
      241 ttcatctcgc gcaggcgctg gacaaaggtc gcgcgctggg aattgaggaa gggcgaccgg
      301 agaacctgca ccgcctcgac gcgagccgag gtcagggcgg cgagccctgg cgcgatctcc
      361 tcgcgcgtgc cgacctgcac gacggtgagg gtgaggccga gactttgtgc gcccttctcg
      421 agcttctcga taccgccttt gacggagttg aagtcgtcgt tcaccacgcc gatatggcgt
      481 gctcgcgggg caatctcatg caggatttcc agccgcttca cctcgagctc atgcgccatg
      541 atactgatgc cggtcgtgtt gccgcccggc cgcgccatcg acggcgccag gccggcacca
      601 acgaagtcgt cggccatgcc gacgatcggc acctgcttgg ttgcggcctg cgccgcagcc
      661 acggcggcat tgccgaaggg cacgatcacc tgggcgcctg atttcaggag ctcggccgcc
      721 atcgccggca gccgggaggt gtcgccatcg gcccacagga aatgcgtgcg gtaagtcctg
      781 ccctcttgcc atcccagccg cgccatgtcg cgccggaacg gctcggcgaa ttgttcggca
      841 ctcctggcgt tgacgcgcat gacgccgatc aggggcggtt gctgctgcgc ctgcgacacc
      901 gccggcagga gcgcgaggcc aagaaaaatg cgtcgtttca tgcggacggg aagcctaacg
      961 gccgcacaac cgccccgcaa cgctcctagt catgcagctc ggcgatcatg ttggcgacca
     1021 aagcgctcca acctgtctgg tgcgaggcgc ccaggccgcg gccgttgtcg ccgtcgtaat
     1081 attcgtggaa gaggaggtag tccttgaagt gcggatcggt ctgcatcttc tcgtaggtgc
     1141 cgaagaccgg ccgccgtccg tttgcgttgc gtcgaaagat gttgatcaac cggttgcgca
     1201 gcccatcggc gagctctttc agcgattgcg tctgcccgga tccgaccggc gattccaccc
     1261 ggaaatcgtc gccgtagaat ttgtaaaact tttgcaggct ttcgatgatc aggtagttga
     1321 tcggcatcca gatcggcccg cgccaattgg aatttccgcc gaagagatcg ctgtcggagt
     1381 cggccggaac atatttgacc tcggagcgaa agtcgccggt ctcgaaaacg tagggatgtt
     1441 cgagatggta gcgcgacaag gatcgtacgc cgtaatccga caggaattcg ttcttgtcca
     1501 gaatgcgctc cagcagcttg gtcgagcgga aggcacgggt aatggcgagc atgcgcgtat
     1561 cggcggcgcc aggcgtgttc cagcgggaaa ccagggtcgc aagcttcgga cgatagcgca
     1621 aataccagtc ccgctgcctg acgaacgacg gcagattctt cagcaaggcc atgtctgcgg
     1681 tctcgacggc gaacatcgga atcaggccga ccagggagcg aacgcgcagg ggtgtcgcct
     1741 cgccattgct catcacgagc cagtcgtaaa agaaattgtc gccgtcgtcc cacaaactca
     1801 g
//
LOCUS       DASWGA010000439         1827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_54220, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000439 DASWGA010000000
VERSION     DASWGA010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54220"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..>1827)
                     /locus_tag="VF991_10470"
     CDS             complement(191..>1827)
                     /locus_tag="VF991_10470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556910.1"
                     /translation="MKWQHLILAVSLIAGVCATGALAHQDDATSQSKPQGEKLGRVLF
                     KTSCTPEAQKQFDRALGMLHSFFFPETVTAFTKVTEIDPSCAIAYWGLAVSVRPNPLV
                     GPWDAATLKRGLDAVEKGKVTGAKTQRERDWLAAIEEVYKDYNKVDQDTRSLNYEQAM
                     EKLTRKYPHDVEAKVFYALALNETASHSDKTYAKQLKAAKILAPIDAKYPDHPGVTHY
                     LIHSLDYTPLAQRGVPAANKYAKVAPSAPHAQHMPSHIYSMLGMWEQSVQSNQNAIQV
                     GKELAAKSYPGMTYAALPHCWDFTEYALLQMGQDQKAKQVRDEAATAPKTNIDSLGIN
                     TGFAAIPARYALERSAWKEAAALEPRGSSYPQAEAITHFARAMGAARTGDVAAAQQDI
                     DKLKELRATLEKANQSYWAEQVEVQILAAQAWLAQGLGTKDEAMKFMRAAADLEDGSE
                     KHISMENRLYPMRELLADLLMEQHEPALALKEYEASMHNTPNRLRGFYGAAKAAEAVG
                     DKKKVATYRRSLARLTRNADSDRVEIREAKQQLASR"
BASE COUNT          275 a          534 c          597 g          421 t
ORIGIN      
        1 aatccgggtc gagcttggcg gcgggatcgt cttcagccgg gtcggccact cccgtacccg
       61 gccacaagac gagccaggcg acggcgacca gcgcgaccgt ggtcaacttc acagttggca
      121 tgatggcgtt ccttgggaca aatcagagcc gccgacgcgt gcagcgtcgg cgggtattgc
      181 cgttgagcgt ttatcggctt gcgagctgct gcttcgcctc gcggatctcg acgcgatcac
      241 tgtcggcgtt gcgcgtcagc cgcgccaggc tgcgcctgta ggtggcgact ttcttcttgt
      301 cgcccacagc ctcggcggcc ttggcggcgc cgtagaaacc gcgcaggcgg ttgggtgtat
      361 tgtgcatcga agcttcatac tccttgagcg ccagcgcggg ctcatgctgc tccatcagca
      421 aatcggcgag cagctcgcgc atcggataca ggcggttttc catcgagatg tgtttttcgc
      481 tgccgtcttc gaggtcggcg gcggcgcgca tgaacttcat cgcctcgtcc ttggtgccca
      541 ggccttgcgc gagccaggcc tgggcggcga ggatttgcac ttcgacttgc tcggcccagt
      601 acgactggtt ggctttctcc agggtagcgc gcagttcttt gagcttgtcg atgtcctgct
      661 gcgctgccgc gacgtcgcca gtacgtgcgg cgcccatggc gcgagcgaag tgcgtgatcg
      721 cctccgcttg cgggtagctg ctgcccctag gctcgagcgc cgccgcctct ttccaggcgc
      781 tgcgctccaa ggcgtaacga gcggggatgg ccgcgaagcc ggtattgata ccgagagaat
      841 cgatattggt ctttggcgct gtggctgctt cgtcacggac ctgtttggct ttctggtctt
      901 ggcccatttg cagcagcgcg tattcagtga aatcccaaca gtgaggtagg gcggcatacg
      961 tcatgcccgg gtagctcttt gcggccagtt ctttccctac ttgaatagca ttctgattgg
     1021 attgcacgga ctgctcccac atgcccagca tcgagtaaat gtgtgatggc atgtgttgcg
     1081 cgtgcggggc ggaaggcgca actttggcgt acttgttggc ggcgggcacg ccgcgttgcg
     1141 ccagcggcgt gtagtccagg ctgtggatga ggtagtgcgt cacgcccgga tgatcgggat
     1201 acttggcgtc gattggcgcg aggatcttgg cggccttcaa ctgcttggcg taggtcttgt
     1261 cgctgtgcga ggcggtttca ttcagtgcca aggcgtagaa caccttggcc tcgacatcgt
     1321 gcgggtattt gcgtgtcagc ttctccatcg cttgctcata gttgagcgag cgcgtgtcct
     1381 ggtcgacctt gttgtagtcc ttgtagacct cttcgatggc cgcgagccag tcgcgctcac
     1441 gctgggtctt ggcaccggtc accttgcctt tttcgacggc gtcgagccca cgcttcagcg
     1501 ttgccgcgtc ccacgggccg accagtgggt taggccgcac gctgacggcc aggccccagt
     1561 aggcgatggc acagctcgga tcgatttccg tgaccttggt gaaggccgtg accgtttctg
     1621 ggaaaaagaa ggagtgcagc atgcccagcg cgcggtcgaa ctgcttttgc gcctctggcg
     1681 tgcacgaggt cttgaacagc actctaccga gcttctcgcc ctggggttta ctttgcgagg
     1741 tggcatcgtc ctggtgggca agcgcaccgg ttgcgcatac gccggcaatg aggcttacag
     1801 caagtatcag gtgttgccat ttcatga
//
LOCUS       DASWGA010000440         1788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1314696, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000440 DASWGA010000000
VERSION     DASWGA010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1314696"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..895
                     /locus_tag="VF991_10475"
     CDS             <1..895
                     /locus_tag="VF991_10475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9556911.1"
                     /translation="LENAKLTTERARTLLAGPAGMQSTYDAAIANQRSLEAQVVAAQA
                     QVKFSQINLDYTEIRSPIDGMIGRTAVTDGNVVSPSSGVLTTIVSQDPMYVTFPVPVR
                     QALELRERYVTKGGFNAVVIKVRLPNGRIFGQTGKLNFANNTIAQSTDTLTVRGVIPN
                     PTLHDPSTTGGPVRELTDGEFVTVMLEGVQPVEVLAIPRAAVLSDQQGDYVFTVGADN
                     KAEQRRIQLGQSTSTIAAVINGLKPGDKVIAEGLQRVRPRQPVAPGPASALIESSMKA
                     AVGDDRPQTDSGNARPAGKIP"
     gene            892..>1788
                     /locus_tag="VF991_10480"
     CDS             892..>1788
                     /locus_tag="VF991_10480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9556912.1"
                     /translation="MISAVFVDRPRLAIVIAFVISIAGALAATHIPVAQFPDIVPPQV
                     TVTGVFPGASASVVETSVAEPLEAQVVGVDSALYMKSTSGNDGSYTLTVSFALGANPD
                     INTVNVNNRVQTALSQLPAEVQQQGLVVQKKSSAVLQFIVLYSENGEQDPLFITNYAI
                     INILDAISRTPGVGQAQLFAKMNYSMRIWFDSQRLTSLNLAPSDVISAIKAQSVQAPV
                     GRIGARPISDQQQFQFNVQTQGRLTDAKQFGDIVLRANPDGSVLRISDVARVEIGAQN
                     LDSESRIDGRAGVPIGIYLAPGA"
BASE COUNT          351 a          573 c          540 g          324 t
ORIGIN      
        1 gctcgaaaac gccaagctga ccactgagcg cgcgcgaacc ctcctcgccg gccccgccgg
       61 aatgcaatcg acctatgacg ccgcaatcgc caaccaacgc agcctcgaag ctcaggtggt
      121 ggctgcgcag gcgcaggtaa agttctcgca aatcaacctc gattacaccg agatccgttc
      181 gcctatcgac ggaatgatcg gccgcacggc ggtgacggac ggcaacgtgg tcagtccgag
      241 ttccggggtg ctcaccacca ttgttagcca ggatccgatg tatgtgactt tcccggtccc
      301 ggtgcgccag gcgcttgagt tgcgggagcg ctatgtgacc aagggcggct tcaacgcggt
      361 ggtgatcaag gtccggctgc cgaacggtcg cattttcggc cagaccggaa aactgaactt
      421 cgccaacaac accatcgcgc aaagcaccga caccctcacg gtacgcggcg tcatccccaa
      481 tccgacgctg catgatcctt ccaccacggg cggtccggtg cgcgaactga ccgacggcga
      541 attcgtcacc gttatgctgg agggcgtgca accggtcgag gtactggcga tcccgcgtgc
      601 cgcggtgttg tccgatcagc aaggcgatta cgtcttcacg gtgggagccg acaacaaagc
      661 cgagcagcgc cgtatacagc tcgggcagtc cacctcgaca attgccgccg tcatcaacgg
      721 gctgaagccg ggtgacaagg tgatcgccga agggttgcaa cgcgtgcgtc cccgccagcc
      781 ggttgcgccg gggccagcga gtgcgctgat cgaatccagt atgaaggcgg ccgtcggtga
      841 cgatcgccct caaacggata gcggcaacgc ccggccggcg ggcaaaatcc catgatctca
      901 gcggtctttg tcgatcgtcc ccgtctcgcg attgtcattg cgttcgtcat ttccatcgcg
      961 ggcgcgctgg cggccacgca cattcctgtg gcgcaatttc ccgatatcgt tccgccgcag
     1021 gtaacggtca cgggcgtgtt tccgggcgcc tccgcgtcgg tggtcgaaac cagcgtcgcc
     1081 gagccgcttg aggcgcaggt cgtcggcgtc gacagtgcac tctacatgaa atccaccagc
     1141 ggcaatgacg gcagctacac gctcaccgtc tcgtttgcac tcggtgccaa tccggacatc
     1201 aataccgtca acgtcaataa ccgcgtgcag accgcgctgt ctcaattgcc ggccgaggtg
     1261 caacagcaag gcttggtggt ccagaagaaa tcgtcggcgg tgctgcagtt catcgtgctc
     1321 tacagcgaaa acggtgaaca ggacccgttg ttcatcacga actacgctat catcaacatc
     1381 ctcgacgcga tctcgcgcac gccgggtgtt ggtcaggcgc agctgttcgc caagatgaac
     1441 tattcgatgc gcatctggtt cgattcgcag cggctcacca gcctcaacct cgcgccctcc
     1501 gatgtcattt cggcgattaa ggcccagagc gtgcaggcgc cggtcggacg catcggtgct
     1561 cgaccgatta gtgatcagca gcagtttcag ttcaacgtgc agacgcaagg ccggttgacc
     1621 gatgccaagc agtttggcga catcgtactg cgggccaatc ccgacggctc ggtattgcgg
     1681 atcagcgatg tggcccgcgt cgagatcggc gcgcagaacc tcgacagcga atcacggatc
     1741 gacggccgcg ccggcgtgcc gatcggcatt tatctggcgc cgggcgcc
//
LOCUS       DASWGA010000441         2724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_180166, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000441 DASWGA010000000
VERSION     DASWGA010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2724
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180166"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..847
                     /locus_tag="VF991_10485"
     CDS             <1..847
                     /locus_tag="VF991_10485"
                     /inference="COORDINATES: protein motif:HMM:NF037627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9556913.1"
                     /translation="SSPSPTSPALASQPDMFGPMLRAWRRRRGASQLALALQSGVSQR
                     HVSFLESGRAKPSREMVVQLSTALDVPLRQRNTMLLAAGFAPVYRESNLGAPELTPVR
                     QAIARMLKQQEPYPAVVIDRLWNLLDANEAAAAFTLFLYEGPPPVPPPGKQPNLLRSL
                     LDPRELRSKVANWEEVARYLVSTTYAEILAAGGEPKALAFIEEVMAYPDVPASFRKLR
                     FEDRPPPVLTVDYIVGGKSLSVFTAIATLGTPQDITLQEVRIECFFPADERSDALFRS
                     LAAKS"
     gene            895..1863
                     /locus_tag="VF991_10490"
     CDS             895..1863
                     /locus_tag="VF991_10490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556914.1"
                     /translation="MKQPSTEWRERIAPDEAAYFTRVATVIGGLQRAKSAKFGPGRAL
                     HRKQLLAATGTLDVLADLPDHARHGVFATPGRHRSLVRLSNGGPDVQANKLPDIRGFA
                     LKVFDVAGEGALGGMTDHQDFLMINQDRTPTADSREFIDFLEAATSGPLAGILHFFKA
                     YGPFGGFVRLRDLFGMLGKRFDGFAVERFNTVAPLCCGPYAVRVRLKPAGNPPPAARS
                     KDIVEDMRERLAVGPLTWDLELQFFVDEAITPIEDASKAWPDTETPIVTVARLTLPQQ
                     GVDAVAAEAEAAKFDPWSGLANHRPLGEVMRARKVAYFGSQKGRGA"
     gene            complement(1873..2397)
                     /locus_tag="VF991_10495"
     CDS             complement(1873..2397)
                     /locus_tag="VF991_10495"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990204 - oxidoreductase complex
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEX9556915.1"
                     /translation="MRSFLLDALFKGKATIAPPGPDAAALEQATRALGERARRRLGRS
                     LAIREIDAGSCNGCELEIHAVSNPVYDIERFGLKFVASPRHADVLLVTGPVTWNMREA
                     LLRTYNAAPEPRWVVALGDCAVNCGVFAGSPAVVGPLADILPVDLHVPGCPPPPLEIV
                     KALLALIEVQAARG"
     gene            complement(2408..>2724)
                     /locus_tag="VF991_10500"
     CDS             complement(2408..>2724)
                     /locus_tag="VF991_10500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011655038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydrogenase expression protein HypE"
                     /protein_id="HEX9556916.1"
                     /translation="VRMDEIGESLRMLSQLLGRLAPGEISAGRPSVAAGEGAALVEAF
                     RGDVFASVRFAADGRLARVHARDASWFQWPLLEAAVEGNIVADFPLCNKSFNCSYSGH
                     DL"
BASE COUNT          440 a          975 c          896 g          413 t
ORIGIN      
        1 atcctcccct tcgccgacct ccccggccct ggcgtcccag cccgacatgt tcggtcccat
       61 gctgcgcgcc tggcggcggc ggcgcggcgc cagccagctg gcgctcgccc tgcagtcggg
      121 cgtatcgcag cgccacgtca gtttcctcga gtccggccgc gccaagccca gccgcgagat
      181 ggtggtgcag ctcagcaccg cgctcgacgt gccgctgcgc cagcgcaaca ccatgctact
      241 ggcggcgggc ttcgcgccgg tctatcgcga gagcaacctt ggcgcgcccg aactcacgcc
      301 ggtgcgccag gcgatcgccc gcatgctgaa gcagcaggag ccctatcccg ccgtcgtcat
      361 cgaccggctg tggaacctgt tggacgccaa cgaggcagcc gccgccttca ccctcttcct
      421 ctacgaaggc ccgccgcccg tgcccccgcc cggcaagcag cccaacctgt tgcgctcgct
      481 gctcgatccc agggagcttc gatccaaggt cgccaactgg gaggaggtcg cgcgctacct
      541 ggtctcgacg acctacgccg agatcctggc cgccggcggc gagcccaagg cgctcgcctt
      601 tatcgaggag gtcatggcct atcccgatgt gcccgcctcg ttccgcaagc tgcgcttcga
      661 ggatcggccg ccgccggtgc tgacggtcga ctacatcgtc ggcggcaagt cgctgtcggt
      721 cttcaccgcc atcgcaacct tggggacccc gcaggacatc accctgcagg aagtgcgtat
      781 cgagtgcttc ttcccggccg atgagcgcag cgacgcgctg ttcagaagcc tcgccgccaa
      841 gagctgatcc aaaggcctcc gacaggcgta taagcgccga tggcggaggg cagcgtgaaa
      901 cagccgagca ctgaatggcg cgagcgcatc gcgcccgacg aagccgctta ctttacgcgc
      961 gtggccaccg tgatcggcgg gctgcagcgt gccaaatcgg cgaagttcgg gccgggccgc
     1021 gccttgcatc gcaagcagct cctggcggcg accgggacgc tggacgtgct ggccgacctg
     1081 ccggaccatg cccggcacgg cgtgttcgcg acgccgggac gccatcggtc gctggtgcgc
     1141 ctgtccaatg gcgggcccga cgtccaggcc aacaagctgc ccgacatcag gggctttgcg
     1201 ttgaaggtgt tcgacgtcgc cggcgaaggt gcgctcggtg gcatgaccga tcaccaggat
     1261 ttcctgatga tcaaccagga ccgcacgccg acggcggaca gccgcgaatt catcgacttc
     1321 ctggaagcgg cgacctccgg cccgctggcg ggcatcctgc atttcttcaa ggcctatggc
     1381 cctttcggcg gcttcgtccg cctgcgcgac ctgttcggca tgttgggcaa gaggttcgac
     1441 ggcttcgcag tggaacgctt caacacggtg gcgccgcttt gctgcggccc ctatgccgtg
     1501 cgcgtgcgcc tgaagcctgc cggcaatccg ccaccggctg cccgctccaa ggatatcgtc
     1561 gaagacatgc gcgagcggct ggccgtcggg ccgctcacct gggaccttga actgcaattc
     1621 ttcgtcgacg aggccatcac gccgatcgaa gacgcgtcta aggcctggcc cgataccgaa
     1681 acgccgatcg tcaccgtggc gcgtcttacc ttgccgcagc aaggcgtcga tgccgtggcc
     1741 gccgaagcgg aagccgccaa gttcgatccc tggagcggac ttgccaacca ccggccgctg
     1801 ggcgaggtca tgcgggcgcg aaaagtcgcc tatttcggca gccagaaggg gcgtggcgcc
     1861 tgaggccgag cgtcagccgc gcgcagcctg aacctctatc agcgccagca aggccttcac
     1921 gatctcaagc ggcggcggcg gacaacccgg cacgtgcaga tcgaccggca ggatgtcggc
     1981 gagcggcccg accacggccg gagaaccggc gaaaacccca caattcaccg cgcagtcgcc
     2041 caaggccacg acccatctgg gctcgggcgc ggcattgtag gtgcgcagca gcgcctcgcg
     2101 catgttccag gtgaccggcc cggtgaccag cagcacgtcg gcatggcgcg gcgaggccac
     2161 gaatttcagg ccgaaccgct cgatgtcgta aaccggattg ctgacggcgt ggatttcgag
     2221 ttcgcagcca ttgcacgagc cggcgtctat ctcgcggatg gcgagcgaac ggccgagccg
     2281 ccgtcgcgcc cgctcgccca gcgcccgcgt cgcctgctcg agcgcggccg catccgggcc
     2341 gggtggcgcg atcgtcgcct tgcccttgaa cagggcgtcg agcaggaagg atctcatcgc
     2401 tgcggcctca cagatcgtgg cccgagtagg agcagttgaa cgacttgttg cagagcggga
     2461 agtcggcaac gatgttgcct tccacggcgg cctccagcag cggccactgg aaccagcttg
     2521 cgtcccgcgc gtggacgcgg gcgagccggc cgtcggccgc gaagcgcacg ctcgcgaaga
     2581 cgtcgccgcg aaaggcctcg accagtgccg cgccctcgcc ggccgccacg gaaggccggc
     2641 cggcgctgat ctctcccggc gccaggcggc ccaggagctg cgacagcatc cggaggcttt
     2701 cgccgatctc gtccatgcgc acca
//
LOCUS       DASWGA010000442         3820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2190981, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000442 DASWGA010000000
VERSION     DASWGA010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3820
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2190981"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..557
                     /locus_tag="VF991_10505"
     CDS             <1..557
                     /locus_tag="VF991_10505"
                     /inference="COORDINATES: protein motif:HMM:NF019158.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="virulence factor SrfB"
                     /protein_id="HEX9556917.1"
                     /translation="RDARLRVEDPKTTVAVGAMIAALAQSQLPDFSFRSDLLRSKSIA
                     KFIGKLDGGGRLQREDLVYRDVDLDNREYELPEAAFEFRGPMWLGARQLDLVRWPAAR
                     LYALEFAKPEYAERHARETPFKIALARVKPKDKDSGDVERFRLRQVTNRDGRAVALDR
                     LTLRLQTLPRREGYWLDTGMLKTG"
     gene            562..3228
                     /locus_tag="VF991_10510"
     CDS             562..3228
                     /locus_tag="VF991_10510"
                     /inference="COORDINATES: protein motif:HMM:NF021642.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor SrfC family protein"
                     /protein_id="HEX9556918.1"
                     /translation="MDTVDLKLAQDCETLAVAASEGVNWLKAAAEQSPTVAQQAPSLV
                     SELQKVRNQSRKLARAARRRMCVGVFGPSQAGKSYLVSILASRDGHPLQARFADKTYD
                     FLREINPPGNRESTGLVTRFGLGLSAGDKDFPVRVRLLTQTDIVKILGNSFLLDFDHQ
                     KAAFERPDGGAIRKRLAELRPRAAAKPYGDLDADDVLDVIEYFDTFFAGVTVELRTDF
                     WREAIELAPRLTGRDRARLWSVLWYDFQPFTDLYLTLYDGLQKLAFAPEALLGMDALI
                     PREKSIVDVLTLDRLGADAEDTLQVRPKQADGRAAPDAELPRSLICALTAELSVAIAE
                     KPWDFFDHTDLLDFPGARSRLKLANLADVAKTKGVAEGANPLRELLLRGKVAYLFQRY
                     SAERELSAILLCIPDGNQEVRDLSDMMTAWIDQTIGATPADRAKQKNALFLVLTKMDR
                     EFEQKAGETEESRKLRWSARLNNSLVNNFRGEWPSNWDGQPFDNTFWLRNPTVIDERL
                     MDYDAGREHGVAESFAARAVELRGHFVDNFDVRRHFADPARAWDEAFKANDGGVSYLV
                     KNLIPVCDPAIKRAQVRGQLEVQIHRLVDRLAGFHSAADGDSRAKKRDLVHTVLRGLA
                     NCIQQQLFGELMAALQIADTALREIYFRISTARASDEANGRNGKPTAPVTQSTGAAVD
                     LGAIFADVFGEEPGRSAPPSGVLEDRAERFAREAADYWLENMRRVGADDKALSHFGVD
                     RQHLGWLIDELVVGAHRLKVIDQLSHEVRELENAANAKWEEIAERQVRTASSTLNGYV
                     SALGFDRLPLDQRPGLPPNAPTRRVFESPAVMNGTPMLSEDPQPIYADYCKDWMRAFL
                     QLAMDNVGYEGGREITPEQNDRLGAILRAVPA"
     gene            3235..>3820
                     /locus_tag="VF991_10515"
     CDS             3235..>3820
                     /locus_tag="VF991_10515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556919.1"
                     /translation="MPIRASVHSLPEPGHALLRISDLDAAPDGLAISIQRQQGPESHL
                     ADDGWRRTEAWLLPEKVARRRDVLELHLGPEICDRLAGIATVRLRVKEPDIGVVATTV
                     VAWPAMLTSGAADPSSKSYDDTVRLRGAAPAPPPEPAPAPEPELPPPLPPTPPRPDLR
                     ASRALDPGPPQRSGAAGWLIAAVVLLAVAVGGYYA"
BASE COUNT          602 a         1393 c         1265 g          560 t
ORIGIN      
        1 tccgcgacgc gcgcctcagg gtcgaggacc ccaagaccac ggtggcggtg ggtgcgatga
       61 tcgcggcctt ggcgcaatcg cagttgcccg acttctcctt ccgctccgac ctgctgcgat
      121 ccaagagcat cgccaagttc atcggcaagc tcgacggcgg cggccggctg cagcgcgagg
      181 acctggtcta ccgcgacgtc gacctcgaca accgcgagta cgagctgccc gaggccgcct
      241 tcgagttccg cgggcccatg tggctgggcg cccgccagct cgacctggtg cgctggccgg
      301 cggcgcgcct ctatgcgctg gaattcgcca agcccgaata tgccgagcgc catgcccgcg
      361 agacgccgtt caagatcgcc ctcgcccggg taaaacccaa ggacaaggac tcgggcgacg
      421 tcgagcgctt ccgcctgcgc caggtcacca accgcgacgg ccgtgccgtc gcgctcgatc
      481 gcctgacgct tcgcctgcaa acgctgccgc gccgtgaggg ctactggctc gacacgggca
      541 tgctcaagac cggttaggaa catggacacc gtcgatctaa agctggccca ggactgcgag
      601 acgctggccg tcgccgccag cgagggcgtg aactggttga aggcagcggc cgagcagtcg
      661 ccgaccgtgg cgcagcaggc gccgtccctg gtcagcgagc tgcagaaggt ccgcaaccag
      721 agccgaaagc tggcgcgcgc cgcccgccgg cgcatgtgcg tcggcgtgtt cgggccgagc
      781 caggccggca aatcctatct ggtctccatc ctggcgagcc gtgacggcca tccgctgcag
      841 gcgcgcttcg ccgacaagac ctacgacttc ctgcgcgaga tcaatccgcc gggcaatcgc
      901 gaatcgaccg gcctggtgac ccgctttggc ctgggactga gcgccggcga caaggacttt
      961 ccggtccgcg tccggctttt gacccagacc gacatcgtca aaatcctcgg caactccttc
     1021 ctgctcgact tcgaccatca gaaggcggcc ttcgagcggc ccgatggcgg cgccatccgc
     1081 aaacgcctgg ccgagctgcg ccccagggcg gccgccaagc cgtacggcga tctcgatgcc
     1141 gacgacgtgc tcgacgtgat cgagtatttc gacaccttct ttgccggcgt gacggtggag
     1201 ctgcgcaccg atttctggcg cgaggccatc gagctggcgc cgcgcctcac cggccgcgac
     1261 cgcgcccggc tgtggtcggt gctgtggtac gacttccagc ccttcaccga cctctacctg
     1321 acgctctacg acggcctgca gaagctcgcc ttcgcgcccg aggcgctgct cggcatggac
     1381 gcgctgatcc cgcgcgagaa gagcatcgtc gacgtgctga ccctcgaccg gctgggcgcc
     1441 gacgccgagg acaccctgca ggtgcggccc aagcaggccg acggccgcgc cgcgcccgac
     1501 gccgagctgc cgcgctcgct gatctgcgcg ctcaccgccg agctcagcgt cgccatcgcc
     1561 gagaagccgt gggacttctt cgaccatacc gacctgctcg acttcccggg cgcccgttcg
     1621 cgcctgaagc tcgccaattt ggccgacgtg gccaagacca agggcgtggc cgaaggcgcc
     1681 aacccgctgc gcgagctttt attgcgcggc aaggtcgcct atctcttcca gcgctattcg
     1741 gccgagcgcg agctcagcgc catcctgctc tgcatccccg acggcaacca ggaagtccgc
     1801 gacctttccg acatgatgac ggcgtggatc gaccagacga tcggcgccac gccggccgac
     1861 cgcgccaagc agaagaacgc gctgttcctg gtgctgacca agatggaccg cgagttcgag
     1921 cagaaggcgg gcgagaccga ggaatcgcgc aagctgcgct ggtcggcccg gctcaacaac
     1981 tcgctggtca acaatttccg cggcgagtgg ccctccaact gggacggcca gccgttcgac
     2041 aacacgttct ggctgcgcaa tccgaccgtc atcgacgagc ggctgatgga ctacgatgcc
     2101 ggccgcgagc acggcgtcgc cgagtccttc gccgcgcggg cggtcgagct gcgcggacat
     2161 ttcgtcgaca acttcgacgt gcgacgccac ttcgccgatc cggcgcgggc ctgggacgag
     2221 gcgttcaagg ccaacgacgg cggcgtgtcc tatctggtga agaacctgat cccggtctgc
     2281 gatccggcga tcaagcgcgc ccaggtgcgc ggccagctcg aagtccagat ccaccgcctg
     2341 gtcgaccgcc tcgccggctt ccacagcgcc gccgacggcg attcgcgcgc caagaagcgc
     2401 gatctggtgc acaccgtgct gcgcgggctc gccaactgca tccagcagca gctgttcggc
     2461 gagctgatgg ccgccctgca gatcgccgat accgccctgc gcgagattta tttccgcatt
     2521 tccaccgcgc gtgcctcgga tgaagccaat ggcaggaacg gcaagccgac cgccccggtg
     2581 acgcagtcga ccggcgccgc cgtcgatctc ggcgcgatct tcgccgatgt gttcggcgaa
     2641 gagcccggcc gcagcgcgcc gccgtcgggt gtgctcgagg atcgcgccga gcgcttcgcc
     2701 cgcgaggccg ccgactattg gctggagaac atgcggcggg tcggcgccga cgacaaggcg
     2761 ctgtcgcatt tcggcgtcga ccgccagcat ctcggctggc tgatcgacga gctggtggtc
     2821 ggcgcccatc gcctcaaagt gatcgaccag ctgagccacg aggtgcgcga gctcgagaac
     2881 gccgccaacg ccaagtggga ggagatcgcc gagcgccagg tccgcaccgc ctcctcgacc
     2941 ttgaacggct atgtgagcgc gctgggcttc gaccgcttgc cgctcgacca gcggcccggc
     3001 ctgccgccca acgcgccgac gcggcgggtc ttcgaaagcc cggcggtcat gaacggcacg
     3061 ccgatgctga gcgaggatcc gcagccgatc tacgccgact attgcaagga ctggatgcgg
     3121 gccttcctgc agctcgccat ggacaatgtc ggctacgagg gcggccgcga gatcacgccg
     3181 gagcagaacg accggctggg cgccatcctg cgcgccgtgc ccgcctaaga cgtcgtgccg
     3241 atccgcgctt ccgtccacag cctgcccgag ccgggtcacg cgctgctccg gatcagcgac
     3301 ctcgacgcgg cacccgacgg gctggcgatt tcgatccagc gccagcaagg acccgaatcg
     3361 catctcgccg acgatggctg gcggcgcacc gaagcctggc tgctgcccga aaaggtcgcg
     3421 cgccggcgcg acgtgctgga gctccatctc gggcccgaga tctgcgaccg gctggccggc
     3481 atcgccacgg tgcggctgcg ggtgaaggag cccgacatcg gcgtcgtcgc cacgacggtg
     3541 gtcgcctggc cggcgatgct gacctcgggc gccgccgatc cgtcgagcaa gtcatacgac
     3601 gacacggtgc gcctgcgcgg tgccgcccct gcgccgccgc cggagccggc accggcgccc
     3661 gaaccggagc tgccgccgcc gctgccgcca acgccgccgc ggcccgacct gcgcgcctcg
     3721 cgcgcgctcg atcccgggcc gcctcagcgc tccggcgcgg cgggttggct gatcgccgcc
     3781 gtcgtgctcc tggcggtcgc ggttggcggc tactacgcct
//
LOCUS       DASWGA010000443        10061 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_180208, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000443 DASWGA010000000
VERSION     DASWGA010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10061
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180208"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..880
                     /locus_tag="VF991_10520"
     CDS             101..880
                     /locus_tag="VF991_10520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9556920.1"
                     /translation="MRVTILGCGTSGGVPRVGGKDGKGEWGAANPADPRNRRRRCSIL
                     VEEQGKTLLVDTSPDVRAQLLDAEVARVDAVIWTHEHADQVHGIDDLRPYTLRQGAIE
                     SWADSRTFEILRRRFGYCFEAEDHSFYNPIYRHHPIEGPFKAAGVLVTPFAQDHGGTS
                     SLGLRFGRVAYANDVVTLSEEAFEILRGAEVLIVDAMRFHPHPTHAHLDRALEWIERI
                     RPKWAFLTNLHVDMDYAEVDRLTPAHVHPCYDGLVIETDGN"
     gene            956..1600
                     /locus_tag="VF991_10525"
     CDS             956..1600
                     /locus_tag="VF991_10525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556921.1"
                     /translation="MFLGGSLAACFLGAPALAQDKLDPGGLTFRDFSSNDNGASFSRG
                     DPMIAGGPNQVSSKIAAIESDKGLARIQFSSIRVELAVPLGWQATEDWERGVAYSSDK
                     RYRVIVWRVDFAYEGVKDAEHYAATKSGSIQARRPTVRAQARKLGDGTFLIVYENATR
                     AQGDSEPRVVFDLVVPRPGNPKEGVLVTLGVPASEAARGLQLMALLKANIRISW"
     gene            1721..2512
                     /gene="mazG"
                     /locus_tag="VF991_10530"
     CDS             1721..2512
                     /gene="mazG"
                     /locus_tag="VF991_10530"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEX9556922.1"
                     /translation="MARLLAVMAWLRDRQHGCPWDVDQTFRTIAPYTIEEAYEVADAI
                     ERDDLPGLKEELGDLLLQVVYHAQMAREAGAFSFADVAAAVADKMVDRHPHVFGDTRI
                     ATAEAQTVSWEARKAAERAARKGGAADEPAGALNGVARALPALLRAEKIQKRAARVGF
                     DWKQTGPVIDKIEEELGELRAELAAGTVDQARLTDELGDVLFAVANLARHCKVDPEAA
                     LRATNDKFERRFRYIERQLAEAGRKPVDASLEEMEALWQEAKTRV"
     gene            complement(2509..3348)
                     /locus_tag="VF991_10535"
     CDS             complement(2509..3348)
                     /locus_tag="VF991_10535"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEX9556923.1"
                     /translation="MLGPGDSERVAELMRETAAAELTPRFRMLAKEDIRLKRPGDFVT
                     VADELSEQRLASGLAKILPGVPVVGEEAAERDPGLVDLIARPGEACWIVDPLDGTANF
                     AAGKDRFAMIVCLVQDRAAVAGWILDVPRQQMAVALRGQGVTLEGTPVRGAHADRPLI
                     GFVGYKFRKEFDRQLPAAKRQQFGRLSTLSCAGAEYLEILSGRADFSLYRMTKSWDHA
                     AGTLMLREAGGDAVRFDGQPYAPAQPINAGLIAAADPNALDEARMLFEAVRLPLLAEL
                     PKP"
     gene            complement(3352..3639)
                     /locus_tag="VF991_10540"
     CDS             complement(3352..3639)
                     /locus_tag="VF991_10540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019517120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEX9556924.1"
                     /translation="MKFKPLHDRLLLKPTTAETKTKAGIIIPDTAQEKPMQGEVVAVG
                     KGKRLEDGRLQPLGVKVGDKVIYGKWSGTEVKLDGADHVILKEEDLFGIVG"
     gene            complement(3693..5039)
                     /gene="hflX"
                     /locus_tag="VF991_10545"
     CDS             complement(3693..5039)
                     /gene="hflX"
                     /locus_tag="VF991_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEX9556925.1"
                     /translation="MSEDLQHNGQHRGKRKAVDTARPATVAAVLSPYASNARGEERDR
                     EAKLEEAVGLARAIDLDVRLAETAPLRRLTPATLVGKGVVERMKAAVEVQGIGLVIVD
                     DRLTPVQQRNLEKAWQAKVIDRTGLILEIFGARARTHEGRLQVELAALDYQRGRLVRS
                     WTHLERQRGGFGFLGGPGESQIEIDRRLIGERIVRIKRDLEGVRRTRAVNRVGRRKAR
                     LPTVALVGYTNAGKSTLFNRLSGAGVVAKNLLFATLDPTMRSIKLPGGKDCVISDTVG
                     FVSDLPTHLVAAFRATLEEVIEADLIVHVRDISHPDTEQQRADAETVLRELGAIEEGQ
                     GNRLIEALNKIDALPPENRRTLQTRCATGAERARQYPVSAATGEGVDQLMEAIGDFLQ
                     TSEAREVAVPLSDGATIAWLYRHGEVRSRRDDGELALLTVALDAAASAQFERRLAR"
     gene            complement(5041..5289)
                     /gene="hfq"
                     /locus_tag="VF991_10550"
     CDS             complement(5041..5289)
                     /gene="hfq"
                     /locus_tag="VF991_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019966324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEX9556926.1"
                     /translation="MSEKAQNVQDVFLNHLRKNKTPVTIFLVNGVKLQGIVTWFDNFS
                     VLLRRDGHSQLVYKHAISTIMPVTPVQLFDGDKAEAAG"
     gene            complement(5396..6052)
                     /locus_tag="VF991_10555"
     CDS             complement(5396..6052)
                     /locus_tag="VF991_10555"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX9556927.1"
                     /translation="MTLPADLKPPRAVLFDWDNTLVNTWPTIVECYHDTFTALGLPPW
                     TADEVRERAHGSLRDLFPGLFGARAGEAERIFYETFYRIHLDRLEPLPGADTLLARCH
                     ALGCYVAVVSNKVGENLRAELAHLGWQRWVSRAVGAKDCLRDKPAPDPIFRALDGTGI
                     APGETVWMVGDTPADLKCAHAAGCLPVLVGGLEQLSGPLLEHPPRLRVRNCHDLVALL
                     "
     gene            complement(6049..6912)
                     /locus_tag="VF991_10560"
     CDS             complement(6049..6912)
                     /locus_tag="VF991_10560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HEX9556928.1"
                     /translation="MARYAYVNGRYVDHRQATVHIEDRGYQLADGVYEVVGVRDGRLI
                     DEGPHIDRLDRSLRELRIGSPVSRATLGFIIRELMRRNRLRDGLVYMQITRGVARRDH
                     AFPTTPVKPALVLTTKNTKRAEADPGPGIAVKSQPDIRWERCDIKTVALLPNVLAKQA
                     ARESGAYEAWLIDDEGKVTEGASTNAWIVTQNDELVTRQTDTGILAGITRLTLKSLAG
                     ALQLKLVERPFTLAEAKKAKEAFITSATSFVTPVVKIDGETVGNGKVGPTARRLREEY
                     VRFAATGEAVT"
     gene            complement(6928..8337)
                     /locus_tag="VF991_10565"
     CDS             complement(6928..8337)
                     /locus_tag="VF991_10565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9556929.1"
                     /translation="MAHDILIVDDERDICTLIAGILEDEGHTARRSHNSTEAIDAVRH
                     RRPALVILDVWLQGSELDGLQLLEVIRREEPPVPVVMISGHGTIDTAVSAIKTGAYDF
                     IEKPFKADRLLLVVDRAIEADRLRRENASLRRRAGGEVTFVGSSSAAANVRTQIERVA
                     PTGSRVLISGPSGTGKETVARLIHQGSKRADGHFVVVNCSALPAERLEIELFGTDGDS
                     GADALRVTGAFEMAHGGTLLLKEVADLPLALQSRLARVLQEQSFTRDGGTTRVEVDVR
                     VLASTGRVLQDEIAAGAFREELFHRLNVVALRVPPLSERREDIPELAADLLRRVADAT
                     GLPTRTIGEDTLAALQGHDWPGNVRQLRNVIERLLILAPAGGGPIRADVLPNDVSEDA
                     PSVLRWEKGGEIMQLPLRDAREVFEREYLLAQVTRFGGNISRTATFVGMERSALHRKL
                     KSLGLHGGAPDERSEAAGS"
     gene            complement(8372..>10061)
                     /locus_tag="VF991_10570"
     CDS             complement(8372..>10061)
                     /locus_tag="VF991_10570"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9556930.1"
                     /translation="TNKLLERLIEGRPMIEAVVIDADNGVIARAIAPEMVSLKDPVPP
                     AQFLWQAVSQARPVEIPSPTGAYFTMQLFVGEPLFLVTGHAVDLRVVDYIKSIQLAGS
                     FYSQIEQAMQRSQLFIFLTCGAIALLMLLAAVWLAVLFASRLTEPIGGLMSAAERVRG
                     GDLTARVEEGPPNDELGQLARSFNRMASQIEQQREELVDANKELDTRRRLTDAVLAGV
                     SAGVLSVDGAGTITRSNRSALELLALPEDGVLGRPLTGVMAELVPLVAQAAERPDRVT
                     QGQVEILHRGTRRILLVRISAASDAGAVVTFDDVTDLMSAQRMAAWGDVARRIAHEIK
                     NPLTPIQLSAERLKRRYLKQIKDDPETFSICTDTIIRQVGDIGRMVDEFSSFARMPRP
                     TVQPEDAKELCQQALFLQRSGNPEIRYVSALPDHPVPLVCDRRQIAQVLTNILKNAAE
                     AIEGRQAGPGRTLPPGEITLTLRDDDATVHIIVEDNGNGLPKEGRDRLTEPYMTTRSK
                     GTGLGLAIVKKIMEDHGGHLVLDDREGGGARISLVFRRDAKEIASARPHATAAQ"
BASE COUNT         1632 a         3376 c         3346 g         1707 t
ORIGIN      
        1 cggccaaggt cgccgaactg aagggcgtga gcctgggcgc gctcgaggcg gccaccaccg
       61 acaacttctt ccggctgttc gccaaggcgg agcgtgtccg gtgcgggtga caatcctggg
      121 ctgcggcacg tcgggcggcg tgccgagagt gggcggcaag gacggcaagg gcgaatgggg
      181 agcggccaat cccgccgatc cgcgcaatcg gcgccgtcgc tgttccatcc tggtcgagga
      241 gcagggcaag accctgctgg tcgatacctc gcccgacgtg cgggcccagc ttctcgacgc
      301 cgaggtcgcg cgggtggacg cggtgatctg gacgcatgag catgccgacc aggtccacgg
      361 catcgacgat ctgcggccct acacgttgcg tcagggggcg atcgaaagct gggccgacag
      421 caggaccttc gagatattgc ggcgccgctt cggctattgc ttcgaggcgg aggaccacag
      481 cttctacaat ccgatctatc gccaccaccc gatcgagggg ccgttcaagg cggccggtgt
      541 cctcgtgacg ccattcgccc aggatcacgg cggcacgtcc tccctgggct tgcgctttgg
      601 tcgcgtggcc tacgccaatg acgtggtgac gctgtcggag gaggccttcg agatcctgcg
      661 cggggccgag gtgctgatcg tcgatgccat gcggttccac ccgcatccaa cccatgccca
      721 tctcgaccgg gccctggagt ggatcgaacg gatcaggccc aagtgggctt ttttgaccaa
      781 tctccacgtc gatatggact atgctgaggt cgatcgcctc acaccggccc acgtccaccc
      841 ttgttacgac ggccttgtta tcgaaacaga tggaaattaa ttattaaacg ccatgaaatt
      901 agagaaaatt cttcatctaa tagataaagc gggacaaagg gagtccggtc gccgcttgtt
      961 cctgggcgga agcctcgcgg catgcttcct gggcgcgccg gcgcttgccc aggacaaact
     1021 cgatcccggc ggcctgacgt ttcgcgactt ttccagcaac gacaatggcg cgagcttcag
     1081 ccgcggcgac cccatgatcg ccggcggtcc caaccaggtg tcatcgaaga ttgccgcgat
     1141 cgagagcgac aaagggctgg cccggatcca gttcagctcg atccgggtcg agctggcggt
     1201 gccgctgggc tggcaggcga ccgaggattg ggagcgaggg gtcgcctata gcagcgacaa
     1261 gcgctaccgc gtgatcgtat ggcgcgtcga cttcgcctat gagggcgtca aagacgccga
     1321 gcactacgcc gccaccaaga gcggctccat ccaggcccgt cgtccgaccg tccgtgccca
     1381 ggcgcgcaag ctgggcgacg gcacgttcct gatcgtctac gagaacgcca ccagggccca
     1441 gggcgacagc gaaccaagag tggtgttcga tctcgtagtc ccaaggccgg gcaacccgaa
     1501 ggaaggcgtc ctggtcacct tgggcgttcc cgccagcgaa gcggcgcgtg gtctgcagct
     1561 aatggcactc ttaaaggcaa atataaggat tagctggtaa tatggtgttt cttcgaatct
     1621 atttatattt gtcataatac atattatacg ataaacggag atgagtgcaa accccatagc
     1681 gtccgaccgt cccacggcgg actcgctgcc ccacgagccg atggcccgcc tgctcgcggt
     1741 catggcgtgg ctgcgcgatc gccagcacgg ctgtccgtgg gacgtcgacc agaccttccg
     1801 caccatcgcg ccgtatacca tcgaagaggc ctacgaggtg gccgacgcca tcgagcgcga
     1861 cgaccttccg gggctcaagg aagagctggg cgatcttctg ctgcaagtcg tttaccacgc
     1921 ccagatggca cgcgaggccg gcgcctttag cttcgccgac gtggcggccg ccgtcgccga
     1981 caagatggtc gaccgccatc cccatgtctt cggcgacacc cggatcgcca cggccgaggc
     2041 ccagaccgtg tcgtgggagg ctcgcaaggc cgccgaacgg gcggccagga agggcggcgc
     2101 cgccgacgag ccggccggtg cgctcaatgg cgtggcgcgc gccctgcccg ccctgttgcg
     2161 ggccgagaag atccagaagc gggcggcccg cgtgggcttc gactggaagc aaaccggtcc
     2221 tgtcattgac aagatcgaag aggagctggg cgagcttcgc gccgaacttg ctgccggaac
     2281 cgtcgaccag gcccggctga ccgacgaatt gggcgacgtc ctgttcgcgg tggccaacct
     2341 ggcgcgccac tgcaaggtcg acccggaggc ggccctgcgc gccaccaacg acaagttcga
     2401 gcgccgcttt cgctatatcg agcggcaact cgccgaagcc ggccgcaagc cggtcgacgc
     2461 cagcctcgag gagatggaag cgctctggca ggaggccaag acgcgcgtct agggcttcgg
     2521 cagctccgcc agcagcggca ggcgcactgc ctcgaacagc atcctcgcct catccaacgc
     2581 gttaggatcg gccgcagcga tcaggccggc gttgatcggt tgtgccggcg cataaggctg
     2641 gccgtcgaac cgcacggcat cgccgcccgc ctctctcagc atcagcgtgc cggcggcatg
     2701 gtcccacgac ttggtcatgc gatagaggct gaagtccgcc cggccggaca ggatttcgag
     2761 atattcggca cccgcacagc tcaaggtcga caaacggccg aactgttggc gctttgctgc
     2821 cggaagctga cggtcaaact ccttgcggaa cttgtagccg acgaagccga tgagcggccg
     2881 gtcggcgtgc gcgccacgga ccggcgtgcc ctccaaggtc accccctgcc cgcgcagcgc
     2941 caccgccatc tgctggcgcg gcacgtcgag gatccagccg gcgaccgccg ccctgtcctg
     3001 caccaggcag acgatcatgg cgaagcgatc cttgccggcg gcgaagttcg ccgtgccgtc
     3061 cagcggatcg acgatccagc acgcctcgcc gggccgtgcg atcagatcga ccaggccggg
     3121 gtctctctcc gccgcctcct cgccgaccac gggcacgccg ggcaggatct tggcgagacc
     3181 ggaagccagg cgctgctcgg agagctcgtc ggccacggtg acgaagtcac cggggcgctt
     3241 cagccggatg tcttccttgg cgagcatgcg aaagcgcggc gtcagctccg ccgcggccgt
     3301 ctcgcgcatc agttcggcga cccgctcaga atcgccggga cccagcatgc gttagccgac
     3361 gataccgaac aggtcttctt ccttgaggat cacatgatcg gcgccgtcga gcttcacttc
     3421 ggtgcccgac cacttgccgt agatcacctt gtcgccgacc ttgacgccga gcggctgcag
     3481 gcggccgtct tccagccgct tgcctttgcc gacggccacg acctcgccct gcatgggttt
     3541 ttcctgggcg gtgtcgggga tgatgatgcc ggccttggtc ttggtctcgg cggtcgtcgg
     3601 cttcagcagc aaccgatcgt gcaagggctt gaatttcatg gtgtttcctt cgcctggact
     3661 gagccgctta tagggagcgg cagcgctttg tgtcaacgcg ccaagcgccg ctcgaactgc
     3721 gccgaagcgg cggcatcgag ggccacggtg agcagcgcca actcgccgtc gtcgcggcgg
     3781 ctgcgcacct cgccatggcg gtagagccag gcgatcgtcg cgccatcgct gagcggcacc
     3841 gccacttcgc gcgcctcgct cgtctggagg aaatcgccga tcgcctccat gagctgatcg
     3901 acgccctcgc cggtcgcggc cgagaccggg tactggcggg cccgctccgc tccggtggca
     3961 cagcgggtct gcaaggtgcg ccggttttcc ggcggcagcg catcgatctt gttcagcgcc
     4021 tcgatcagcc ggttcccctg cccctcctcg atcgctccca attcgcgcag caccgtctcg
     4081 gcgtcggcgc gttgctgctc ggtatcggga tgggagatgt cgcgcacatg cacgatcagg
     4141 tcggcctcga tcacctcctc cagggtcgcc cggaaggccg cgaccaggtg cgtcggcagg
     4201 tcggagacga agcccacggt gtcggagatc acgcagtcct tgccacccgg cagcttgatc
     4261 gaccgcatgg tgggatcgag ggtggcaaac agcaggttct tggccacgac gccagcgccg
     4321 gagaggcggt tgaacagcgt cgacttgccg gcattggtgt agcccaccag cgccacggtc
     4381 ggcaggcgcg ccttgcgccg gccgacgcga ttgacggcgc gcgtacgccg cacgccttcg
     4441 agatcgcgct tgatcctgac gatgcgctcg ccgatcagcc ggcggtcgat ctcgatctgc
     4501 gattcgccgg ggccgcccag gaagccgaaa ccgccgcgct ggcgttccaa gtgggtccac
     4561 gagcggacca gacgaccacg ctgatagtca agcgccgcca gctcgacctg caggcggccc
     4621 tcatgcgtgc gggcgcgggc accgaagatc tccaggatga ggccggtacg gtcgatgacc
     4681 ttggcctgcc aggccttttc gagattgcgc tgctgcacgg gcgtcaacct gtcgtcgacg
     4741 atcaccagac cgatgccctg cacttccacg gcggccttca tgcgctcgac gacgcccttg
     4801 ccgaccagcg tggcgggcgt cagccggcgc aacggcgcgg tctcggccag gcgcacgtcg
     4861 aggtcgatcg cccgggcaag cccgaccgcc tcctcgagct tggcctcgcg atcgcgctcc
     4921 tcgccgcggg cgttggacgc gtatgggctg agcaccgccg ccaccgtggc cggccgcgcg
     4981 gtgtccactg ccttgcgctt gcctctgtgc tgtccgttgt gctggagatc ttcgctcaaa
     5041 tcagcctgct gcttcggctt tgtccccgtc gaacagctgc accggcgtga ctggcatgat
     5101 ggtcgagatc gcatgcttgt agacaagctg cgagtggccg tcgcggcgca gcagcaccga
     5161 gaagttgtcg aaccaagtga cgatcccctg cagtttgacg ccgttcacca ggaagatcgt
     5221 gacgggcgtc ttgttcttgc gcaggtggtt caggaagaca tcctgaacgt tctgtgcctt
     5281 ttcgctcatg ttcttggcct cttgctgggc ggccggctgc cggaaggtcg ccggtttgaa
     5341 aggcgcggga cttttacccg ctcccgagtt ccgtcaaata taggggccga tcggttcaaa
     5401 gcaatgccac cagatcatga caattgcgta ccctgaggcg cggcggatgc tctagcagag
     5461 ggcccgacaa ttgttccagg ccgccgacga gaacgggcaa acagcccgca gcatgggcac
     5521 atttgagatc ggccggggta tcgcccacca tccataccgt ttcaccgggc gcaattcccg
     5581 tgccatcgag ggcgcgaaag atgggatcgg gcgccggctt gtcgcgcaga cagtccttgg
     5641 cgccgaccgc gcgcgagacc caacgctgcc agccgagatg ggcgagctcg gcccgcagat
     5701 tctctcccac cttgttgctt acaactgcga catagcagcc aagcgcgtgg cagcgcgcca
     5761 gcaacgtgtc ggcgcccggc agcggctcca gccgatccaa gtggatgcgg taaaacgtct
     5821 cgtagaagat ccgctccgcc tcgccggcgc gcgctccgaa cagaccgggg aagaggtcgc
     5881 gcaacgagcc gtgggcgcgc tcgcgcacct cgtcggccgt ccacggcggc aagcccagcg
     5941 ccgtgaaggt gtcgtgatag cactcgacga tggtcggcca ggtgttgacc agcgtgttgt
     6001 cccagtcgaa cagcacggcg cgcggcggct tgagatcggc cggcagcgtc acgtcaccgc
     6061 ctcgcccgtg gccgcgaagc gcacgtattc ctcgcgcagt cgtcgcgccg tcggcccgac
     6121 cttgccgttg cctactgtct cgccgtcgat cttcaccacc ggcgtgacga acgacgtggc
     6181 gctggtgatg aaggcctcct tcgccttctt ggcttcggcc aacgtgaacg gccgctcgac
     6241 gagcttgagc tggagcgcgc cggccagcga cttcagcgtg agccgcgtga tgcctgccag
     6301 gatgccggtg tcggtctgac gcgtcaccag ctcgtcgttt tgcgtcacga tccaggcgtt
     6361 ggtcgaggcg ccctcggtga ccttgccctc gtcgtcgatc agccaggcct cataggcgcc
     6421 gctttcgcgc gccgcctgct tggcgagcac gttgggcagc agcgccacgg tcttgatgtc
     6481 gcagcgctcc cagcggatgt cgggctggct cttgaccgcg ataccgggcc ccggatcggc
     6541 ttcggcgcgc ttggtgttct tggtcgtcag aaccagcgcc ggcttgacgg gcgtcgtcgg
     6601 gaaggcgtga tcgcgccgcg ccacgccgcg cgtgatctgc atgtagacca gcccgtcgcg
     6661 cagccggttg cggcgcatca gctcgcggat gatgaagccc agcgtcgccc gcgacaccgg
     6721 cgagccgatg cgaagctcgc gcaacgaacg atcgaggcgg tcgatgtgcg gcccctcgtc
     6781 gatcaaccgg ccgtcgcgca cgccgaccac ctcatagacg ccgtcggcca gttgatagcc
     6841 gcggtcctcg atatggacgg tggcctgacg atgatcgaca taacgtccat tgacgtaggc
     6901 gtagcgcgcc atgacacgat cctcggatta cgagccggcg gcttcgctgc gctcgtctgg
     6961 cgcgccgcca tgaagcccca gcgacttcag cttgcggtgc aaggctgagc gttccatgcc
     7021 gacgaaggtg gcggtgcgcg agatgttgcc gccgaagcgc gtgacctggg ccagcaggta
     7081 ttcgcgttcg aacacttcgc gggcgtcgcg cagcggcagc tgcatgatct cgccgccctt
     7141 ctcccagcgc agcaccgacg gcgcgtcctc gctcacgtcg ttgggcagca cgtcggcccg
     7201 gatcggccca ccgcccgcgg gggcgaggat cagcagccgc tcgatgacat tgcgcagctg
     7261 acggacattg ccgggccagt cgtggccctg cagggcggcc agcgtgtcct cgccgatggt
     7321 gcgggtcggc aggccggtcg cgtcggccac gcgccgcagc aggtcggcgg ccagctcggg
     7381 aatgtcctcg cggcgctcgc tgagcggcgg cacgcgcaag gccaccacat tcagccgatg
     7441 gaacagctcc tcgcggaagg cgccggccgc gatctcgtcc tgcaggacgc ggccggtcga
     7501 ggccagcacg cgcacgtcga cctcgactcg cgtcgtgccg ccgtcgcggg tgaaggactg
     7561 ctcctgcagc acgcgcgcca acctgctctg cagcgccagc ggcaggtcgg cgacttcctt
     7621 gagcagcagc gtgccgccat gcgccatttc gaaggcgccg gtgacgcgca gtgcatccgc
     7681 cccgctgtcg ccgtcggtac cgaacagctc gatttcgagt cgctcggcgg gcaacgccga
     7741 gcagttcacc acgacgaagt gcccatcggc ccgcttcgag ccctggtgga tcagccgcgc
     7801 cacggtttcc ttgccggtgc ccgacggacc gctgatcagc acccggctgc cggtcggcgc
     7861 cacccgctcg atctgggtgc ggacattggc cgcggcactg gaagagccga cgaacgtcac
     7921 ctcgccgccg gcgcggcggc gcaggctggc gttctcgcgc ctcagccggt cggcctcgat
     7981 ggcgcgatcg accaccagca gcaagcggtc ggccttgaag ggtttttcga tgaagtcgta
     8041 ggccccggtc ttgatcgccg aaacagcggt atcgatcgtg ccgtggccgc tgatcatcac
     8101 cacgggaacc ggcggttcct cgcggcggat gacctcgaga agctgcagcc cgtcgagctc
     8161 gctgccctgc agccagacgt cgaggatcac cagcgcaggc cggcgatggc gcacggcatc
     8221 gatggcctcg gtgctgttgt gggagcggcg ggcggtatgg ccctcgtcct ccaggatgcc
     8281 cgcgatcagc gtgcagatat cgcgttcgtc gtcgacgata agaatatcgt gggccatgac
     8341 tcttcaaact gtccgcgacg ttgttggcgg atcattgtgc agctgtcgca tgcgggcgag
     8401 ccgacgcgat ttccttcgcg tcccgccgga ataccagact gatgcgcgca ccgccaccct
     8461 cgcggtcatc caggacgaga tggccgccat gatcttccat gatcttcttg acgatcgcga
     8521 gtcccaagcc cgtgcctttg ctgcgggtgg tcatgtacgg ttcggtgagg cggtcgcgac
     8581 cttccttcgg caggccgttg ccgttgtcct cgacgatgat gtgcaccgtg gcgtcgtcgt
     8641 cgcgcagggt gagcgtgatc tcgcccggcg gtaatgtgcg ccccggcccg gcctgcctgc
     8701 cttcgatggc ctcggccgcg ttcttcagga tgttggtcag cacctgcgcg atctggcgcc
     8761 ggtcgcagac cagaggcacc ggatgatccg gcagagcgga gacgtagcgg atctccggat
     8821 tgccgctgcg ctggaggaac aacgcctgct ggcagagctc cttggcatcc tcgggctgca
     8881 ccgtcgggcg cggcatgcgg gcgaacgacg agaattcgtc gaccatgcgg ccgatatccc
     8941 cgacctgacg gatgatggtg tcggtgcaga tcgagaacgt ctcgggatcg tccttgatct
     9001 gcttcaggta gcggcgcttc agccgttcgg cggagagctg aattggcgtc agcgggttct
     9061 tgatctcgtg cgcgatgcgc cgcgccacgt cgccccaggc cgccatgcgc tgcgccgaca
     9121 tcaggtcggt cacgtcgtcg aaggtgacca cggcgccggc gtcggaggcg gcactgatgc
     9181 ggaccagcag gatgcggcgc gtgccgcgat gcaggatctc gacttggccc tgggtcacgc
     9241 ggtccggccg ctcggccgcc tgggcaacca gcggcaccag ctcggccatg acgccggtca
     9301 atggccggcc gagcacgccg tcctcgggca gcgccagaag ctcgagcgcc gagcggttgc
     9361 tgcgcgtgat cgtgcccgcg ccatcgacgc tcaacacgcc ggccgagacc ccggccagga
     9421 ccgcgtcggt gagccggcgt ctggtgtcga gctccttgtt ggcgtcgacc agctcttcgc
     9481 gctgctgctc gatctggctc gccatgcggt taaatgagcg cgcgagctgg cccagttcgt
     9541 cgttgggcgg cccctcctcg accctcgccg tgagatcgcc gccgcgcacc cgctcggccg
     9601 ccgacatcag gccgccaatc ggctcggtga ggcgcgaggc gaacaggacg gcgagccaca
     9661 ccgccgccag cagcatcagg agggcgatgg caccgcaggt cagaaagatg aagagctggc
     9721 tacgctgcat cgcctgctcg atctgtgaat agaacgagcc tgccagctgg atgctcttga
     9781 tgtagtcgac gaccctgagg tcgacggcat ggccggtcac caggaagagc ggttcaccga
     9841 cgaaaagctg catggtgaag taggcgccgg taggcgatgg gatctcgact gggcgggcct
     9901 ggctgactgc ctgccagagg aactgtgctg gcggcaccgg atccttcagg cttaccattt
     9961 ccggcgcgat ggcgcgagcg atcacgccgt tgtcggcgtc gatgacgacc gcctcgatca
    10021 tcggccggcc ctcgatcagc cgttccagca gcttgttcgt c
//
LOCUS       DASWGA010000444         3734 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_811559, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000444 DASWGA010000000
VERSION     DASWGA010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3734
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_811559"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..1060)
                     /gene="fgd"
                     /locus_tag="VF991_10575"
     CDS             complement(56..1060)
                     /gene="fgd"
                     /locus_tag="VF991_10575"
                     /EC_number="1.1.98.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0006007 - glucose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase
                     (coenzyme-F420)"
                     /protein_id="HEX9556931.1"
                     /translation="MLKLGYKASAEQFAPAKLLDFACQAEAAGFDSAFVSDHFQPWKH
                     VDGHAPFSLAWLGALGARTSRLVMGTSVLTPTFRYHPSIVAQAFGTLGSMFPGRVILG
                     IGTGESLNEVPSTGQPWPEFKERFARLREAVTLIRTLWREERVSFEGQYYRTAKATIY
                     DRPATEVPIYVAAAGALVARYAGRSGDGFICTSGKKWELYTETLLPKVAEGLAAAGPR
                     SQPYDHMIELKVSFDSDAARAKEDTRHWAALALTPEEKVSVEDPMEMQRLAEALPIER
                     AASRWIVSSDPDEQVDKIAAYVDLGFRHLVFHAPGPDQARFLKLYGEQVLPRLRKRFG
                     "
     gene            1025..1633
                     /locus_tag="VF991_10580"
     CDS             1025..1633
                     /locus_tag="VF991_10580"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046316 - gluconokinase activity [Evidence
                     IEA];
                     GO_process: GO:0046177 - D-gluconate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEX9556932.1"
                     /translation="MFGRRLVSELEHGDGFLIVSGGEVLMDQQGANNRPIIVVVMGVS
                     GCGKSTVSTLLAARFGWQFQEGDALHPPENVEKMRGGTPLSDADRIPWLRRIAEKIDD
                     WRRRGESGVLTCSALKRTYRQIIVGDRPEVALVYLKGLPDLIRRRLDTRHDHFMPPAL
                     LDSQFSILQEPSPDENPIVVDIAGQPDEIVGEIAHRLRKFDS"
     gene            1676..2461
                     /locus_tag="VF991_10585"
     CDS             1676..2461
                     /locus_tag="VF991_10585"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556933.1"
                     /translation="MAGVDWTDSTVEAAGTKLHVSRAGRGRPVMILHHETGTLDRLPF
                     YDALAEHYDVLVPHHPGYSRSERPEWMRSARDIAVIYRGLLGELKLEQAALVGLGFGG
                     WIAAEMASMAPADLSHLVLVGAMGIKPPQGDILDLAVTGYVDYARAGFHDQKAFDRVY
                     GAEPSVDQLEMWDICREMSFRIAWKPYMYSQTLPHLLGSVRVPTLVVWGDDDKVVPQS
                     AAKRYVEALPNAKLEIVKASGHCIDMEQPEALAKLVKNFIGRE"
     gene            2467..3711
                     /locus_tag="VF991_10590"
     CDS             2467..3711
                     /locus_tag="VF991_10590"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9556934.1"
                     /translation="MHLMYFTEQPMSAYSEQAGRDFGATALMFSNKHFDPVAGSRLYN
                     NYIEQYMLAEEVGVDGIMLNEHHNAPFCMQAKANIFAAILAGMTQKVKIVMLGNPLPL
                     AENPVRLAEELAMIDMISKGRLVSGFVRGGGQEQLATGVNPAFNSERFEEAHELVVKA
                     WTQPGPFRFEGTHYQHRVVNPWAVPLQKPYPRVWIPGVISKETIVWAAQQRYPYIALN
                     TSIEQTKKIWELYDSVALQSGYVGGPENRGYLIQVHVSDNEDKAIENARQFRWMQGEF
                     TGLAHPVWSTPSGYGSPSARRAFVEFAAGRAINPRGNTSFEQQMADLRIIAGTPKTVI
                     AKLKRILEETRPGILALWGNDGRVSQEDSLTCIRLIGTEVFPAIREIAKSLDLKSPFE
                     ANAPVHLNYSTDLKPGKAAAAE"
BASE COUNT          670 a         1226 c         1225 g          613 t
ORIGIN      
        1 ggcttgatca tgggcaggcc ggggactgct aaaagctcga cggcggcggt tcgggtcatc
       61 cgaaacgctt gcgcaggcgg ggcagcacct gctcgccgta cagtttcagg aaccgcgcct
      121 gatccggacc gggcgcatgg aacacgagat ggcgaaagcc gagatcgaca taggcggcga
      181 tcttgtcgac ctgctcatcg gggtcgctcg agacgatcca gcggctggcg gcgcgttcga
      241 tcggcagagc ctcggccagg cgctgcatct ccattggatc ctcgaccgac accttctctt
      301 cgggcgtcag cgccagcgcc gcccagtgac gcgtgtcctc cttggcgcgc gcggcatcgc
      361 tgtcgaacga gacttttagc tcgatcatgt gatcgtaggg ttgcgagcgc ggcccggcgg
      421 cggccagtcc ttcggcgacc ttgggcagca aggtctcggt atagagctcc cacttcttgc
      481 cgctggtgca gatgaagccg tcgcccgacc gtccggcata gcgggcgacc agggcgccgg
      541 cggcggcgac atagatcggc acctcggttg ccggccgatc gtagatggtg gccttcgcgg
      601 tgcgatagta ctggccctcg aagctcaccc gctcctcgcg ccacagcgtg cggatcaacg
      661 tcaccgcctc gcgcaggcgg gcgaagcgct ccttgaactc cggccagggc tggccggtcg
      721 agggcacctc gttcagcgat tcgccggtgc cgatgcccag gatcacgcgc cccgggaaca
      781 tcgagcccag ggtgccgaag gcctgggcga cgatcgaggg gtggtagcgg aaggtggggg
      841 tcagcacgct ggttcccatc accagccgcg aggttcgggc acccagcgcg cccagccagg
      901 cgagcgagaa cggcgcgtgg ccatcgacgt gtttccaggg ctggaagtgg tcgctgacga
      961 aggccgaatc gaagccggcg gcttcggctt ggcaggcgaa gtccaaaagc ttggccggcg
     1021 cgaattgttc ggccgacgcc ttgtatccga gcttgagcac ggtgatggtt tccttatcgt
     1081 gtccggcggt gaagtcttaa tggaccagca aggggctaac aaccggccga tcatcgtggt
     1141 cgtcatgggc gtttccggct gcggcaagag cacggtctcg accctgctcg ccgccagatt
     1201 cggatggcaa ttccaggaag gcgacgcgct gcatccgccc gagaacgtcg agaagatgcg
     1261 cggcggtacg ccgctcagcg atgccgaccg cataccctgg ctgcgccgga tcgcggagaa
     1321 aatcgacgac tggcgccggc gcggcgaatc gggcgtgctg acctgctcgg cgttgaagcg
     1381 gacttatcgg cagatcatcg tcggcgatcg gcccgaggtg gcgttggtct acctcaaggg
     1441 cctgcccgat ctcatccgcc gacgcctcga cacccggcac gatcacttca tgccgcccgc
     1501 cttgctggac agccagttct cgatcctgca ggagccctcg ccagacgaaa atcccatcgt
     1561 cgtcgacatc gctggccagc cggacgagat cgtcggcgaa atcgcacacc ggctacgcaa
     1621 gtttgactcc tgaaggtcgg gttgcaacga tccttgccat agggaaggaa cgtgaatggc
     1681 cggcgtagat tggaccgatt ccacggtgga ggccgcaggc acgaaactcc acgtgtcgcg
     1741 cgccggccga ggccgtcccg tcatgatcct gcatcacgag accggcacgc tggatcgcct
     1801 gcctttctat gacgcgttgg ccgagcacta cgacgtgctg gtgccgcacc atccgggcta
     1861 cagccggtcg gagcggccgg agtggatgcg cagcgcgcgc gacatcgccg tgatctatcg
     1921 cggcctgctc ggcgaactga agctcgagca agccgctctc gtcgggctgg ggttcggcgg
     1981 ctggatcgcc gccgagatgg cgagcatggc gccggccgat ctgtcccatc tggtgctggt
     2041 cggcgccatg ggcatcaagc cgccgcaggg cgacatcctc gatctcgccg tcaccggcta
     2101 tgtcgactac gcccgcgccg gcttccacga ccagaaggca ttcgatcgcg tctatggcgc
     2161 cgagccttcg gtcgaccagc tcgaaatgtg ggacatctgc cgcgagatga gttttcgcat
     2221 cgcctggaag ccctacatgt acagccagac cttgccgcat ctgttaggta gtgtgcgggt
     2281 gccgactctc gtcgtctggg gcgacgacga caaggtggtg ccgcagagcg cggccaagcg
     2341 ctacgtcgag gccttgccca acgccaagct ggaaatcgtc aaggcgagcg gccattgcat
     2401 cgacatggag cagcccgagg cgctcgccaa gctggttaaa aacttcatcg gtcgggagta
     2461 actgccatgc acctgatgta tttcaccgag cagccgatgt cggcctattc cgagcaggcc
     2521 ggccgtgact tcggcgccac cgcgctgatg ttctccaaca agcatttcga tcccgtcgcg
     2581 ggctcgcggc tctacaacaa ctacatcgag caatacatgc tggccgagga ggtcggcgtc
     2641 gacggcatca tgctgaacga gcaccacaac gcgccgttct gcatgcaggc caaggccaac
     2701 atcttcgccg ccatcctcgc cggcatgacc cagaaggtga agatcgtcat gctgggcaat
     2761 ccgctgccct tggcggagaa cccggtccgg ctggccgaag agctcgccat gatcgacatg
     2821 atctccaagg gaaggctggt ctcgggcttc gtgcgcggcg gcggccagga gcagctcgcc
     2881 accggcgtca acccggcctt caacagcgag cgcttcgagg aggcgcacga gctggtcgtc
     2941 aaggcctgga cccagcccgg cccgttccgc ttcgagggca cccactatca gcaccgcgtg
     3001 gtgaacccct gggcggtgcc gctgcagaag ccctatccgc gcgtctggat cccgggcgtg
     3061 atcagcaagg agacgatcgt gtgggcggcg cagcagcgct atccctatat cgcgctcaac
     3121 acctcgatcg agcagaccaa gaagatctgg gaactctacg acagcgtcgc gctgcagtcg
     3181 ggctatgtcg gcgggccgga gaatcgcggc tacctgatcc aggtccacgt ctccgacaac
     3241 gaggacaagg cgatcgagaa cgcccggcag ttccgctgga tgcagggcga gttcaccggc
     3301 ctcgcccatc cggtgtggag cacgccgtcg ggttacggct cgccgtccgc ccgccgcgcc
     3361 ttcgtcgagt tcgcggccgg ccgcgccatc aatccgcgcg gcaacaccag cttcgagcag
     3421 cagatggccg acctccgcat catcgccggc acgcccaaga cggtgatcgc caagctgaag
     3481 cgcatcctcg aagagacgcg gccgggcatc ctggcgctgt ggggcaacga cggccgcgtg
     3541 agccaggagg actcgctcac ctgcatcagg ctgatcggca cggaagtctt cccggcgatc
     3601 cgcgagatcg ccaagagcct cgacctcaag agcccgttcg aggcgaatgc gcctgtccat
     3661 ctcaactatt cgaccgacct gaagccgggc aaggcagccg cggcggagtg agctggcgtc
     3721 gctgaaacca cacc
//
LOCUS       DASWGA010000445        14354 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_430407, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000445 DASWGA010000000
VERSION     DASWGA010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 14354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14354
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430407"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VF991_10595"
     CDS             <1..256
                     /locus_tag="VF991_10595"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011424925.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEX9556935.1"
                     /translation="HHFKLYTEGYKVPAGETYTVVEAPKGEFGVYLVADGTNKPYRCK
                     IRAPGFPHLQALDMMTRGHQLADMSANIGSLDIVFGEIDR"
     gene            268..849
                     /gene="nuoE"
                     /locus_tag="VF991_10600"
     CDS             268..849
                     /gene="nuoE"
                     /locus_tag="VF991_10600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEX9556936.1"
                     /translation="MSMITADPRDVPHVAHFAFTPENLAKAKELIANYPPGRQASAVI
                     GILDLAQRQQGWLPRAAMDEVAKLLDMAPIRVYEIATFYTMFQLRPRGKYLLQVCTTT
                     PCWLRGSDAVMKACQHAADGETFSVQEVECLGACVNAPVVQINDDFYEDLDEASMNRL
                     LDAFRRGEAPKPGSQIDRQTSAPEGGPTTLRSE"
     gene            853..2136
                     /gene="nuoF"
                     /locus_tag="VF991_10605"
     CDS             853..2136
                     /gene="nuoF"
                     /locus_tag="VF991_10605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEX9556937.1"
                     /translation="MLADKDRIFTNLYGIHDWRLPAARARGAWDNTKALLDRGHDALC
                     DEIKKSGLRGRGGAGFPTGLKWSFMPKEVKDRPHYLVVNADESEPGTCKDRDIMRHDP
                     HLLIEGCLVAGFAMRANAGYIYVRGEFYREAEHLTAAIHEAYEAGLLGKNACGSGWDF
                     DLYVHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGSGLYGCPTTVNNVESIAVA
                     PTIVRRGATWFAAIGRPNNTGTKLFCISGHVNKPCNVEEEMGIPLRELLDRHAGGVRG
                     GWDNLLAVIPGGASVPLLPKSICDTVLMDFDSLRDQKTGLGTAAVIVMDKSTDIVKAI
                     ARLSQFYKHESCGQCTPCREGTGWMWRVMERMVVGNARIDEIDALEDVTRQVEGHTIC
                     ALGDAAAWPIQGLIRHFRPEMERRIRARTEKLAAE"
     gene            2152..4200
                     /gene="nuoG"
                     /locus_tag="VF991_10610"
     CDS             2152..4200
                     /gene="nuoG"
                     /locus_tag="VF991_10610"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HEX9556938.1"
                     /translation="MPKLKIDGIEVEVPAGITVLQACELAGVEIPRFCYHERLSIAGN
                     CRMCLVEQEKAPKPIASCAMPAMDNMVIHTNTPAVQKARKGVMEFLLINHPLDCPICD
                     QGGECDLQDQAMAYGFDRSRYHENKRAVPDKELGPLVKTSMNRCIHCTRCIRFATEVA
                     GVEELGATGRGESMEVTTYVEHALTSELSGNIVDLCPVGALTSKPYAFEARSWELEKT
                     ESIDVLDALGSNIRVDTRGMQVMRVLPRLNEDINEEWISDKTRHAIDGLRYQRLDRPY
                     LRRGGKLVEATWDEAFAAIAAKLLNIDGAKVAAIVGDQCDAESMVAFKDLMAALGSPN
                     IDCRQDGAKLEAGVRGGYIFNPGIRGIDQADAILLIGTDPRREVPVLNARIRKRHLHS
                     PCAIASIGPAADLTYPVERLGTGPATLRELVEGKLGFFEKLKAAKNPLIVVGMGALAR
                     DDGAAVLALARELVDRLGAVRDDWNGFAVLHTAAARVGGLDLGLVPGEGGRDVAAILT
                     GCEKREIEVVYLLAADEIDTQRLGKAFVIYQGHHGDAGAHRADVILPGAAYTEKPGTY
                     VNTEGRVQLALRAGYPPGDAREDWTILRALSERLGKTLPYDTLGQVRSRLIAVNRSFA
                     ALDQQQAGAWGVFGKAGNLADASFVSPIANFYMTCPISRASRTMAECTASRAQLMAAE
                     "
     gene            4204..5244
                     /gene="nuoH"
                     /locus_tag="VF991_10615"
     CDS             4204..5244
                     /gene="nuoH"
                     /locus_tag="VF991_10615"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEX9556939.1"
                     /translation="MTADLVHFFTTNWLGQAIVILLECLAVTVPLLVAVAYMTYVDRK
                     VWASIQLRRGPNVVGPFGLLQPFADGLKLMLKETIVPSSANTVLFLIAPMITFMTALI
                     AWAVVPFDDGWVIADINVGILYLFAISSLSVYGIIIAGWASNSKYAFLGALRSAAQMV
                     SYEVSIGFVLITVLLCVGSLNLSQVVIAQSGWFFNWFWLPLLPMFVIFFVSALAETNR
                     TPFDLPMSEAELVQGFQTEYSSMPFALFFLGEYANIILLSAMGSVLFLGGWMSPVPYP
                     PFTWVPGVIWFALKIALLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVVTAA
                     VLQFGGWVPKLF"
     gene            5255..5743
                     /gene="nuoI"
                     /locus_tag="VF991_10620"
     CDS             5255..5743
                     /gene="nuoI"
                     /locus_tag="VF991_10620"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEX9556940.1"
                     /translation="MASLDRTARAFLLSELVAGFALTLKYMFKPKVTLNYPYEKGPLS
                     PRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAEPRDDGSRRTTRYDIDMVKC
                     IYCGFCQEACPVDAIVEGPNFEFSTETREELMYNKEKLLANGDQWESAIAANLQADAA
                     YR"
     gene            5764..6378
                     /locus_tag="VF991_10625"
     CDS             5764..6378
                     /locus_tag="VF991_10625"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013652821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEX9556941.1"
                     /translation="MLLQALAFYVFGFVVMASAAMVVVSRNPVYSVLFLILAFFNAAA
                     LFVLIGAEFIAMILVIVYVGAVAVLFLFVVMMLDINLTELREGFLKYLPVGAMIGIVL
                     LLEILLGLGVIGSNPTTLAGLGKAGPQVLAIDNTRAIGRVLYTQYFYLFQIAGVVLLV
                     AMIGAIVLTLRSRPGVRRQRIGEQLYRPKEDAVTVVKVPTRGGV"
     gene            6378..6686
                     /gene="nuoK"
                     /locus_tag="VF991_10630"
     CDS             6378..6686
                     /gene="nuoK"
                     /locus_tag="VF991_10630"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEX9556942.1"
                     /translation="MTIGLGHYLFVAAVLFTLGILGIFLNRKNVIVILMCVELMLLAV
                     NINLVAFSVFQGNIVGQVFAMLVLTVAAAEAAIGLAILVVYFRIRGTIEVEDINAMKG
                     "
     gene            6699..8681
                     /gene="nuoL"
                     /locus_tag="VF991_10635"
     CDS             6699..8681
                     /gene="nuoL"
                     /locus_tag="VF991_10635"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEX9556943.1"
                     /translation="MDLAIKLIVLLPLLAAAIAGMFCRVIGDRPAQIVTCAALLIAAA
                     LSIFVFVRIGFGPENAKLVVVKLFTWMDSGTLTVDWSLRVDTLTAVMLIVVTGVSSMV
                     HVYSVGYMAEDPGIPRFMSYLSLFTFFMLMLVTSDNLVQLFFGWEGVGLASYLLIGFW
                     YDRPSANAAAIKAFIVNRVGDFGFALGIFAVWMLSGAINYADIFAKGPDMAQMRIHFL
                     GLDLPALETACLLLFVGAMGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMV
                     CRLSPLFELAPIASAVVTLVGAATAFFAATIGLTQFDIKRVVAYSTCSQLGYMFFAAG
                     VGSYSAAMFHLTTHAFFKALLFLGSGSVITALHHEQDMRKMGGVKEKTPQTFYVMWIG
                     TLALSGIGVPFLLGNGIGFSGFYSKDMMLESAYGVHTTVGLIAFWLGVVAAFMTAFYS
                     TRLMFLTFYGSYRGDHHTWEHAHESPAVILIPLYVLAAGALLSGYVAFDWFVGHDWAH
                     FWGQSIAVKSTEEVLHHAHEVPVWVTLAPLVFALSGIALSYYYYLVRPELPALTARRF
                     PAIYALFYNKWYFDEIYDALFVQPALAVGRLFWKKGDEAVIDGLGPDNIAARAQDMAG
                     VLSRFQSGYLYHYAFVMLVGVVALVSYFMYPMLVAR"
     gene            8687..10201
                     /locus_tag="VF991_10640"
     CDS             8687..10201
                     /locus_tag="VF991_10640"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEX9556944.1"
                     /translation="MSSWPILSLVTFLPLVGALFCLVVNGPQEAVDRNCKSAALLTSV
                     VTFLISLLLWARFDVTKAGFQFEEKLDWVPALNIGYHMGIDGISLFFVLLSTLLTPIC
                     ILSSWEAVHVRVKEYMIAFLVLETFMVGMFCALDLALFYVFFEGVLIPMFLIIGVWGG
                     PRRVYSAFKFFLYTLLGSVLMLLAIIAIYWQLGTTDLPTAMEKLELPFIWQCWLFLAF
                     LASFAVKVPMWPVHTWLPDAHVEAPTAGSVILAGVLLKMGGYGFLRLSIPLLPEATQY
                     FAPLIFGLSVVAVIYTSLVALVQEDMKKLIAYSSVAHMGLVTIGAFILNVQSVQGSMF
                     QMLSHGIVSAALFLCVGVVYDRMHTREIAAYGGLVHRMPRYAFTFMFFTLASVGLPGL
                     SGFVGEFLVLLGTFKVNTWVAFLAATGLILGVAYALWLYRKIMFGELTKDSLKAILDM
                     NRREVVVFLPLVLLALWMGVYPSSFLDPMAPSVDKLVGDYQAAIKLARTAALTP"
     gene            10221..11663
                     /gene="nuoN"
                     /locus_tag="VF991_10645"
     CDS             10221..11663
                     /gene="nuoN"
                     /locus_tag="VF991_10645"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEX9556945.1"
                     /translation="MIIGLESWTLARPELFLAAITGLLLIYGVVRGEMATPFVSLATS
                     VALLVTAVLLFVPYREGTAFASLFIVDRLTTTMKALVLLGSAVAILMSRAYFEQVKAW
                     RFEYPLLVALATLGMMLMISANDLMALYVGLELQSLALYVVAAFQRDSIRSTEAGVKY
                     FVLGSVASGMLLFGASLIYGFCGGTAFVQVSHALLEGRGGEIGTVIGLVFVVTGLAFK
                     VSAVPFHMWTPDVYEGAPTPVTALFAVAPKIAAVSLLVSVLMGPFKPLFLQWQQIIVV
                     ASVLSMAWGAFAALRQQNIKRLMAYSSIGNVGYVLLGLASGSEKGIQSVVFYLAIYAV
                     MTLGVFAVILLMKRRGVMVEGIGDLAGLARSQPMMAFALLLFMFSLAGIPPLAGFWGK
                     LYIFIAAVEAQLYVPAVLGVLASVVASYYYLRIVKVMYFDEPAEALDGPVFGVNRVVA
                     FASAILVAAFSLAPQPLSLVAAAAAKGLFP"
     gene            11660..12394
                     /locus_tag="VF991_10650"
     CDS             11660..12394
                     /locus_tag="VF991_10650"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEX9556946.1"
                     /translation="MRSAPVLPDGWTLVALASVGSTNDEAARLADAGAPEGTVVWSRE
                     QTGGRGRRGRHWASPVGNLYSSTILRPDCAAPRAAELGFVAALAVADIVPADRQVRLK
                     WPNDVLVDGGKIAGILLESAVGRAGQVDHVVAGIGLNVGFAPQLPEMRYPGAALGGSV
                     EAALEGLTAALAARLAQWRRDGFETVRAAWLAQAGPIGAEVDVRLGDELVRGRFAGLD
                     RQGALLLDTAAGPRKIVSGELLGRAA"
     gene            12407..13174
                     /locus_tag="VF991_10655"
     CDS             12407..13174
                     /locus_tag="VF991_10655"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF009844.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEX9556947.1"
                     /translation="MLLAINVNNTNVKFGVIDGDRIVGEWRQHTSAMRTADEHAVWLF
                     QLMAMAGIDPKAITDAIIGSVVPQATFNIRRLCTRYFDCEPLVLGESNVVYGIKVKGH
                     GAGADRICNTVGASVLFPKTPVVVVDFGTATTFDVVDEEGSYCGGAIAPGINLSIEAL
                     VNATAQLPRIVVEKPKQVIGTNTVACMHSGVFWGYVGLIEGIVARIKAEFGKPMKVIS
                     TGGLAPVFDGSTSVIEQIVPDITARGLIEIFRRSKKA"
     gene            13171..>14354
                     /locus_tag="VF991_10660"
     CDS             13171..>14354
                     /locus_tag="VF991_10660"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEX9556948.1"
                     /translation="MTVPSNDELLFLALGGAGEIGMNLNLYGHAGKWLMIDLGIGFAD
                     DSMPGIEVVMPDPAFIEERRDALVGIVLTHAHEDHLGAVADLWPRLRAPVYATPFAAS
                     VLQRKLVEAGLMDAVPVTVIPLRGKFILPPFELELITMTHSILEPNALAIRTKLGTVF
                     HTGDWKIDPEPLLGEVTDEAVLRRIGEEGALAMVCDSTNVFVEGEAGSEATVRVNLEK
                     LVKTSKCRVAVTCFASNLARVESVALAAVAAGRHPVLSGRALQRMVDAAQECGYLLDF
                     PQCIPEQQAGYLPRDKVLFICTGSQGEPRASMAKLAGGEHRDLVLETGDTAIFSSRVI
                     PGNERSVGRLQNALMARGVEVITDREADIHVSGHPARDELVRVYQWVRPKIAVPVHGE
                     VR"
BASE COUNT         2173 a         4775 c         4651 g         2755 t
ORIGIN      
        1 ccatcacttc aagctctata ccgaaggcta caaggtgccg gccggcgaga cctataccgt
       61 cgtcgaggcg cccaagggcg agttcggcgt ctatctggtg gccgacggca ccaacaagcc
      121 ctaccgctgc aagatccgcg cgcccggctt tccgcatctg caggccctcg acatgatgac
      181 cagaggccac cagctcgcag acatgtcggc caacatcggt tcgctcgaca tcgtgttcgg
      241 cgagatcgac cgttaggagg cgatgacatg tcgatgatca ccgccgatcc ccgggatgtg
      301 ccgcatgtcg cgcatttcgc cttcacgccg gagaatctgg cgaaggccaa ggagctgatc
      361 gccaactatc cgccgggccg ccaggcgagc gctgtgatcg gcatcctcga cctcgcccag
      421 cgccagcagg gctggctgcc gcgggcggcg atggacgagg tcgccaagct cctcgacatg
      481 gcgccgatcc gcgtctacga gatcgcgact ttttacacga tgttccagct caggccgcgc
      541 gggaaatatc tcctgcaggt ctgcacgacg acgccgtgct ggctgcgcgg ctccgatgcg
      601 gtgatgaagg cctgccagca cgccgccgac ggcgagacct tcagtgtcca ggaagtcgaa
      661 tgcctcggcg cctgcgtcaa cgcgccggtc gtgcagatca acgacgactt ttacgaggat
      721 ctcgacgagg catcgatgaa caggctgctc gacgcgtttc ggcgcggcga ggcgccgaag
      781 cccggatcgc agatcgaccg ccagacgtcg gcgccggaag gcgggccgac cacgctcagg
      841 agcgagtaga cgatgcttgc cgacaaggac cgcatcttca ccaatctcta cggcatccac
      901 gactggcgtc tgccggccgc tcgcgcgcgc ggcgcctggg acaacaccaa ggcgctgctc
      961 gaccggggcc acgacgcgct ctgcgacgag atcaagaaat ccggcctgcg cggccgtggc
     1021 ggcgccgggt ttccgaccgg gctcaaatgg tccttcatgc ccaaggaggt caaggaccgg
     1081 ccgcactatc tcgtcgtcaa cgccgacgaa tcggagcccg gcacctgcaa ggatcgcgac
     1141 atcatgcgtc acgatccgca tctgctgatc gagggctgcc tggtcgcggg cttcgccatg
     1201 cgcgccaacg ccggctacat ctacgtgcgc ggcgaattct accgcgaagc cgagcatctg
     1261 acggcggcga tccacgaagc ctatgaggcg ggccttttgg gcaagaacgc ctgcggctcg
     1321 ggctgggatt tcgacctcta cgtccatcgc ggcgccggcg cctacatctg cggcgaggag
     1381 acggcgctgc tcgaaagcct cgagggcaag aagggcatgc cgcggctaaa accgccgttc
     1441 ccggccggct ccggcctcta tggctgcccg acgacggtga acaacgtcga gtcgatcgcg
     1501 gtggcaccca ccatcgtgcg ccgcggcgcc acctggtttg cggccatcgg ccggcccaac
     1561 aacaccggca ccaagctgtt ctgcatctcg ggccacgtga acaagccctg caacgtcgaa
     1621 gaagagatgg gcatcccgct gcgcgagctt ttagaccgcc atgccggcgg cgtgcgcggc
     1681 ggctgggaca atcttctagc ggtgatcccc ggcggcgcct cggtgccgct gttgcccaag
     1741 tcgatctgcg acaccgtcct gatggatttc gattcgctgc gcgaccagaa gaccggcttg
     1801 ggcacggcgg cggtcatcgt catggacaag tcgaccgaca tcgtgaaagc gatcgcccgg
     1861 ctcagccagt tctacaagca tgaaagctgc ggccagtgca cgccctgccg cgagggcacc
     1921 ggctggatgt ggcgggtgat ggagcgcatg gttgtcggca acgcgcgcat cgatgagatc
     1981 gatgcgttgg aggacgttac ccggcaggtc gagggtcaca cgatctgcgc gctgggtgat
     2041 gcggcggcct ggccgatcca gggcctgatc cgccatttcc ggcccgagat ggagcgccgc
     2101 atccgcgcgc gcaccgaaaa gctcgcggcc gagtagggca gggagcaggc aatgcccaag
     2161 ttgaagatcg acggcatcga ggtcgaggtc ccggccggaa tcaccgtcct gcaggcctgc
     2221 gagctggctg gcgtcgaaat cccgcgcttc tgctaccacg agcgcctgtc gatcgccggc
     2281 aactgccgca tgtgcttggt cgagcaggag aaggcgccca agccgatcgc ctcctgcgcc
     2341 atgccggcca tggacaacat ggtgatccac accaacacgc ctgccgtgca gaaggcgcgc
     2401 aagggcgtga tggagttcct gctgatcaac catccgctcg actgtccgat ctgcgaccag
     2461 ggcggcgagt gcgacctgca ggatcaggcg atggcctacg gcttcgaccg cagccgctac
     2521 cacgagaaca agcgcgcggt gccggacaag gaattgggcc cgctggtcaa gacgtcgatg
     2581 aaccgctgca tccactgcac gcgctgcatc cgcttcgcca ccgaggtggc cggcgtcgag
     2641 gagctgggcg cgaccggccg cggcgagagc atggaggtca cgacctacgt cgagcatgcg
     2701 ctcaccagcg agctgtcggg caacatcgtc gatctctgcc cggtcggcgc gctcacctcc
     2761 aagccctatg ccttcgaggc gcgatcctgg gagctcgaga agaccgagtc gatcgacgtc
     2821 ctggacgcgc tcggctccaa catccgcgtc gacacgcgcg gcatgcaggt gatgcgcgtg
     2881 ctgccgcggc tcaacgagga catcaacgag gagtggattt ccgacaagac gcggcacgcc
     2941 atcgatggcc tgcgctacca gcggctcgat cggccctacc tgaggcgcgg tggcaagctc
     3001 gtcgaagcga cctgggacga agctttcgcc gccatcgccg ccaagctttt gaacatcgac
     3061 ggcgccaagg tcgcggcaat cgtcggcgac cagtgcgatg ccgagtccat ggttgcattc
     3121 aaggacctga tggcggctct cggctcaccc aacatcgact gccggcagga tggcgccaag
     3181 ctcgaggcgg gcgtgcgcgg cggctacatc ttcaatcccg gcattcgcgg catcgaccag
     3241 gcggacgcca tcctgctgat cgggaccgat ccgcggcggg aagtgccggt gctgaacgcg
     3301 cgcatccgca agcgccacct gcacagccct tgcgccatcg ccagcatcgg tccggccgcc
     3361 gatctcacct atccggtcga gcggctgggc acggggccgg cgacgctgcg cgagctcgtg
     3421 gaggggaaac tcggcttctt cgagaagctg aaggcggcca agaacccgct gatcgtggtc
     3481 ggcatggggg cgctcgcccg cgacgacggc gcggcggtgc tggcgctcgc ccgcgagctg
     3541 gtcgacaggc ttggcgcggt gcgcgacgac tggaatggct ttgcggtgct gcacacggct
     3601 gcggcacgtg tcggcgggct cgatctcggc ctggtgccgg gcgagggcgg acgcgacgtc
     3661 gcggccatcc tgaccggctg tgagaagcgc gagatcgagg tggtttatct tttagctgcc
     3721 gacgagatcg acacccagcg gctcggcaag gcgttcgtga tctaccaggg ccatcacggt
     3781 gatgccggcg cccatcgcgc cgacgtgatc ctgccgggtg cggcctacac cgaaaagccg
     3841 ggcacctatg tcaataccga aggccgcgtg cagctcgccc tgcgcgccgg ctatccgccg
     3901 ggcgacgccc gcgaggactg gacgatcctg cgggcgctgt ccgaacgcct gggcaagacc
     3961 ctgccgtacg acacgctcgg ccaggtccgc tcgcggctga tcgcggtgaa ccgaagcttt
     4021 gccgcactcg accagcagca ggcgggcgcc tggggcgtct tcggcaaggc gggcaaccta
     4081 gccgacgcgt ccttcgtctc gccgatcgcc aatttctaca tgacctgtcc gatcagccgg
     4141 gcgtcgcgca ccatggccga gtgcaccgcc tcgcgcgccc agctgatggc ggcggagtag
     4201 gcaatgaccg ccgatctcgt ccatttcttc accaccaact ggctgggcca ggcgatcgtc
     4261 atcctgctcg aatgcctggc ggtcaccgtg ccgctcctgg tggcggtggc ctacatgacc
     4321 tatgtcgacc gcaaggtctg ggcctcgatt cagctgcgcc gcgggcccaa cgtggtcggg
     4381 ccgttcggcc tgctgcagcc tttcgccgac ggcctcaagc tgatgctgaa ggagaccatc
     4441 gttccctcga gcgccaacac ggtgctgttc ctgatcgcgc ccatgatcac cttcatgacc
     4501 gcgctgatcg cctgggcggt cgtgccgttc gacgacggct gggtgatcgc cgacatcaat
     4561 gtcggcatcc tctatctttt cgccatctcc tcgctcagcg tctacggcat catcatcgcc
     4621 ggctgggcat cgaactcgaa atacgccttc ctgggcgcgc tgcgctcggc ggcgcagatg
     4681 gtgtcctatg aggtctcgat cggcttcgtg ctgatcaccg tcctgctctg cgtcggctcg
     4741 ctcaacctct cccaggtggt gatcgcccag tcgggctggt tcttcaactg gttctggctg
     4801 ccgctgctgc cgatgttcgt gatcttcttc gtctcggcgc tggccgagac caaccgcacg
     4861 ccgttcgacc tgccgatgtc ggaagccgag ctcgtccagg gttttcagac cgaatattcg
     4921 tcgatgccgt ttgccctgtt cttcctcggc gaatacgcca acatcatcct gctctcggcg
     4981 atgggttccg tgctgttcct cggcggctgg atgtcgccgg tgccgtaccc acccttcacc
     5041 tgggtgccgg gcgtcatctg gttcgcgctc aagatcgcgc tgctgctgtt cgtcttcagc
     5101 tggaccaagg gaacgctgcc ccgctatcgc tacgaccagc tgatgcggct gggctggaag
     5161 gtgttcctgc ccgtgtcgct gggctgggtc gtcgtcaccg ccgccgtgct ccagttcggc
     5221 ggctgggttc ccaagctctt ctagggagat cgtcatggcc tctctcgacc gcaccgcgcg
     5281 cgctttcctg ctctccgagc tggtggcggg ctttgcgctg acgctgaaat acatgttcaa
     5341 gcccaaggtg acgctgaact atccctacga gaagggaccg ctcagtccgc gcttccgcgg
     5401 cgagcatgcg ttgcgccgct atcccaacgg cgaggaacgt tgcatcgcct gcaagctctg
     5461 cgaggcgatc tgtccggccc aggccatcac catcgaggcc gagccgcgcg acgacggcag
     5521 ccggcgcacc acgcgctacg atatcgacat ggtgaagtgc atctattgcg gcttctgcca
     5581 ggaggcctgc ccggtcgacg ccatcgtcga aggaccgaac ttcgaattct cgaccgagac
     5641 ccgcgaggag ctgatgtaca acaaggaaaa gctgctcgcc aacggcgacc agtgggagtc
     5701 ggcgatcgcg gccaacctcc aggccgacgc ggcatatcgc tgagccggga cgggtagggg
     5761 atcatgctgc ttcaggccct ggccttctat gtcttcggct tcgtcgtcat ggcgtcggct
     5821 gcgatggtcg tggtgtcgcg caatcctgtc tactcggtgc tgttcctgat cctggccttc
     5881 ttcaacgccg cggcgctgtt cgtgctgatc ggcgccgagt tcatcgccat gatcctggtc
     5941 atcgtctatg tcggcgcggt agcggtgctg ttcctgttcg tcgtcatgat gctcgacatc
     6001 aacctcaccg agttgcgcga gggcttcctg aaatacctgc cggtcggcgc catgatcggc
     6061 atcgtgctgc tcttggaaat cctgctcggg ctgggcgtga tcggcagcaa tccgacgacc
     6121 ttggcggggc tcggcaaggc ggggccgcag gtgctggcga tcgacaatac gcgggccatc
     6181 ggccgcgtgc tctatacaca atatttctac ctcttccaga tcgcgggcgt ggtgctgctg
     6241 gtcgccatga ttggcgccat cgtgctcacc ctgcgcagcc gtcccggcgt tcgccgccag
     6301 cgcatcggcg agcagctcta ccggcccaag gaagacgccg tcaccgtggt caaggtgccg
     6361 acgcggggag gcgtgtgatg acgatcggcc tcggccacta cctgttcgtc gccgccgtgc
     6421 tgttcacgct cggcatcctg ggcatcttcc tcaaccgcaa gaacgtcatc gtcatcctga
     6481 tgtgcgtcga gctgatgctg ctcgcggtga acatcaacct cgtcgccttc tcggtcttcc
     6541 agggcaatat cgtgggccag gtcttcgcca tgctggtgct gaccgtggcc gccgccgagg
     6601 cggcgatcgg ccttgccatc ctggtcgtct atttccgcat tcgcggaacg atcgaggtcg
     6661 aagacatcaa cgcgatgaag ggctaggggc gcgcactcat ggatctcgcc atcaagctca
     6721 tcgtcctgtt gccgctgctg gcggccgcca tcgccggcat gttctgccgc gtcatcggcg
     6781 atcggccggc gcaaatcgtc acctgtgccg cgctgctgat cgcggcggcg ctgtcgattt
     6841 ttgtcttcgt gcgcatcggc ttcgggccgg agaacgccaa gctggtggtc gtaaagctgt
     6901 tcacctggat ggactcgggc acgctcaccg tcgactggtc gctcagggtc gacacgctga
     6961 ccgccgtcat gctgatcgtc gtcaccggcg tgtcgtcgat ggtgcacgtc tactcggtcg
     7021 gctacatggc cgaggacccc ggcatcccgc gcttcatgtc gtacttgagc ctgttcacct
     7081 tcttcatgct gatgctggtg acctcggaca acctggtcca gctcttcttc ggctgggaag
     7141 gcgtgggtct cgcctcgtat ctgctgatcg gcttctggta cgaccggccg tcggccaatg
     7201 ctgcggccat caaggcgttc atcgtcaacc gcgtcggcga cttcggcttc gccctcggca
     7261 tcttcgccgt gtggatgctg agcggcgcga tcaactacgc cgacatcttc gccaagggcc
     7321 ccgacatggc ccagatgcgc atccatttcc tagggcttga cctgccggcg ctcgagacgg
     7381 cctgcctgct gctgttcgtc ggcgccatgg gcaagtcggc ccagatcggc ctgcacacct
     7441 ggctgcccga tgccatggaa ggcccgactc cggtttccgc cctgatccat gccgccacca
     7501 tggtgacggc cggcgtcttc atggtctgcc gcctctcgcc cttgtttgag ctggcgccga
     7561 tcgcctcggc ggtcgtcacc ctggtcggcg cggcgaccgc cttcttcgcc gccacgatcg
     7621 gcctcaccca gttcgacatc aagcgggtgg tcgcctattc gacctgcagc cagctcggct
     7681 acatgttctt cgccgccggt gtcggctcct attcggcggc gatgttccac ctcacgaccc
     7741 acgccttctt caaggcgctg ttgttcctgg gctcgggctc ggtcatcacc gccctgcacc
     7801 acgagcagga catgcgcaag atgggcggcg tcaaggagaa gacgcctcag actttctatg
     7861 tgatgtggat cggcacgctc gcgctgtcgg gcatcggcgt gccgttcctc ctgggcaacg
     7921 gcatcggctt ctcgggcttc tactccaagg acatgatgct ggaatcggct tacggggtgc
     7981 acaccacggt gggcctcatc gccttctggc tgggcgtcgt ggccgccttc atgacggcgt
     8041 tctattcgac ccgcctgatg ttcctgacgt tctacggctc ctatcgcggc gatcatcata
     8101 cctgggagca tgcccacgaa tcgccggcgg tcatactgat cccgctctac gtgttggcgg
     8161 ccggcgcgct gttgtcgggc tacgtcgcct tcgactggtt cgtcggtcat gattgggcgc
     8221 atttctgggg ccagtcgatc gccgtgaagt ccaccgagga ggtcctgcac cacgcgcacg
     8281 aggtgccggt gtgggtgacg ctggcgccgc tggtcttcgc cctctcgggc atcgcgctca
     8341 gctactatta ctacctcgtg cggcccgagc tgccggcgct cacggcccgg cgcttccccg
     8401 ccatctacgc gcttttctac aacaagtggt acttcgacga gatctacgac gcgctcttcg
     8461 tccagccggc gctcgcggtc ggccgcctgt tctggaagaa gggcgacgag gcggtgatcg
     8521 acggactcgg tcccgacaac atcgccgccc gtgcccagga catggcgggc gtgctcagcc
     8581 gcttccagag cggctatctg taccattatg cgttcgtcat gctggtcggt gtggtggccc
     8641 tcgtctccta cttcatgtac cccatgctgg tggcgaggta aggccgatgt cgagctggcc
     8701 tatcctttcg ctcgtcacct tcctgccgct ggtcggcgcg ctgttctgcc tggtcgtcaa
     8761 cggcccgcag gaggccgtcg accgcaactg caagagtgcg gcgctgctca cgtcggtggt
     8821 gacgttcctg atctcgctgc tgttgtgggc gcgcttcgac gtcaccaagg cgggtttcca
     8881 gttcgaggag aagctcgact gggtgccggc gctcaacatc ggctaccaca tgggcatcga
     8941 cggcatctcg ctgttcttcg tcctgctgtc gaccctgctg acgccgatct gcatcctgtc
     9001 gagctgggag gccgttcacg tccgcgtcaa ggaatacatg atcgccttcc tggtgctcga
     9061 gaccttcatg gtcggcatgt tctgcgcgct cgacctcgcg ctgttctatg tcttcttcga
     9121 gggcgtgctg atcccgatgt tcctgatcat cggggtctgg ggcggtccgc ggcgcgtcta
     9181 ttcggccttc aagttcttcc tctatacgct gctgggctcg gtgctgatgc tgctggccat
     9241 catcgccatc tactggcagc tcggcaccac cgacctgccg acggcgatgg aaaagctcga
     9301 actgccgttc atctggcagt gctggctgtt tctggccttc ctcgcctcgt tcgcggtcaa
     9361 ggtgccgatg tggccggtcc acacctggct gccggatgcc cacgtcgagg cgccgactgc
     9421 gggttcggtg atcctggccg gcgtgctgtt gaagatgggc ggctacggct tcctgcggct
     9481 ctcgatcccg cttctgcccg aggcgacgca gtacttcgcc ccgctgatct tcggcctgtc
     9541 cgtcgtcgcc gtcatctaca cctcgctggt ggcgctggtg caggaggaca tgaagaagct
     9601 gatcgcctat tcgtcggtcg cccacatggg cttggtgacg atcggtgcct tcatcctcaa
     9661 cgtacaatcg gtccagggct cgatgttcca gatgctgagt cacggcatcg tgtcggccgc
     9721 gctcttcctc tgcgtcggcg tggtctacga ccgcatgcac acgcgtgaga tcgcggccta
     9781 tggcggcctc gtgcatcgca tgccgcgcta cgccttcacc ttcatgttct tcaccttggc
     9841 gagcgtcggc ctgccgggcc tgtcgggctt cgtcggtgaa ttcttggtgc tgctcggcac
     9901 cttcaaggtc aatacctggg tcgcgttcct ggcggcgacc ggcctgatcc tgggcgtcgc
     9961 ctacgcgctc tggctttatc gcaagatcat gttcggcgag ctcaccaagg attccctgaa
    10021 ggcgatcctc gacatgaacc gccgcgaggt cgtggtgttc ctgccgctgg tgctgctggc
    10081 cctgtggatg ggcgtctatc ccagttcctt cctcgatccg atggcgccct ccgtcgacaa
    10141 gctggtcggc gactaccagg cggccatcaa gcttgcccgc accgcggcgt tgacgccgtg
    10201 agcgggcggg ggtgacgaac atgatcatcg gtctcgaatc ctggacgctg gcccggccgg
    10261 aactcttcct cgccgccatc accggccttc tgctgatcta tggcgtggtc cgcggcgaga
    10321 tggcgacgcc gttcgtgtcg ctggcaacgt cggtcgccct gctggtgacg gcggtcctgc
    10381 tgttcgtgcc ctaccgcgag ggcacggcct tcgcctcgct gttcatcgtc gatcggctga
    10441 ccaccacgat gaaggcgctg gtgctgctgg gctcggccgt cgccatcctg atgtcgcgtg
    10501 cctatttcga gcaggtcaaa gcctggcgct tcgagtatcc gctgctggtg gcgctggcca
    10561 cgctgggcat gatgctgatg atctctgcca acgacctgat ggcgctctat gtcgggctgg
    10621 agctgcagtc gctggcgctc tatgtcgtcg ccgccttcca gcgcgacagc attcgctcca
    10681 ccgaggccgg cgtgaaatat ttcgtcctgg gctcggttgc ctcgggcatg ctgctgttcg
    10741 gcgcctcgct gatctacggc ttctgcggcg gtacggcctt cgtccaggtc tcgcacgccc
    10801 tgctcgaggg ccggggcggc gagatcggca ccgtcatcgg gctggtgttc gtggtgacgg
    10861 ggctcgcctt caaggtctcc gccgtgccgt tccatatgtg gacgccagac gtctacgagg
    10921 gcgcgccgac gccggtgacg gcgctgttcg ccgtcgcccc caagatcgcc gccgtgtcgc
    10981 tgttggtctc ggtcctgatg ggtccgttca agccgctgtt cctgcagtgg cagcagatca
    11041 tcgtcgtggc ctcggtgctg tcgatggcgt ggggcgcttt cgccgccctg cgccagcaga
    11101 acatcaagcg cctgatggcc tactcctcga tcggcaacgt cggttacgtt ctgctcggtc
    11161 tggcgagcgg cagcgagaag ggcatccagt cggtggtctt ctacctcgcg atctatgccg
    11221 tcatgacgct cggcgttttt gccgtcatcc tgctgatgaa gcgccgcggc gtcatggtcg
    11281 aaggcatcgg cgatctcgcc ggcttggcgc gcagccagcc gatgatggcc ttcgccctgc
    11341 tgctcttcat gttctcgctg gccggcatcc cgccgctcgc cggtttctgg ggcaagctct
    11401 acatcttcat cgccgccgtc gaggcccagc tctacgtgcc cgccgtgctg ggcgtgctgg
    11461 cctcggtcgt ggcctcctac tactacctac gcatcgtcaa ggtgatgtat ttcgacgaac
    11521 cggccgaggc gctcgacggg ccggtgttcg gcgtcaaccg cgttgtggcc tttgcctcgg
    11581 ccatcctggt cgccgccttt tcgctggcgc cccagccgct cagcctggtc gctgccgcgg
    11641 cggcgaaggg cctgttcccg tgagatcagc gcccgtcctg ccggacgggt ggacgctggt
    11701 cgcgctggcg agcgtcggca gcaccaacga cgaggccgcg cgcctggccg atgccggtgc
    11761 acccgaaggc accgtcgtgt ggtcgcgcga gcagaccggc ggaaggggcc ggcgcggccg
    11821 tcattgggct tcgccggtcg gcaatctcta cagctcgacg atcctgcggc ccgattgcgc
    11881 cgccccgcgc gccgccgagc tgggctttgt tgcagccttg gcggtggccg acatcgtgcc
    11941 cgccgatcgc caggtgcgcc tgaaatggcc gaacgacgtg ctggtcgacg gcggcaagat
    12001 cgccggcatc ctgctcgaaa gcgccgtcgg ccgggccgga caggtggatc acgtcgtggc
    12061 cggcatcggg ctcaatgtcg gatttgcgcc gcagctgccg gaaatgcgct atcccggcgc
    12121 ggcgctcggc ggttcggtcg aggctgccct ggaggggctg accgcggccc tggctgcgcg
    12181 cctcgcccaa tggcgtcgcg acggcttcga gacggtgcgc gcggcgtggc tcgcccaggc
    12241 cggaccgatc ggcgccgagg tcgatgtcag gctgggcgac gagctggtgc gcggccgctt
    12301 cgccgggctc gatcggcaag gcgcgctgct gctcgatacc gccgccggcc cgcgcaagat
    12361 cgtatcgggt gagttgctgg gccgcgcggc ttagaggagg acggcgatgc tgctcgccat
    12421 caatgtcaac aataccaacg tgaagttcgg cgtcatcgat ggcgaccgca tcgtcggcga
    12481 atggcgccag cacacgtcgg ccatgcgcac cgccgacgag cacgcggtct ggctgttcca
    12541 gctcatggca atggcaggca tcgaccccaa ggccatcacc gacgcgatca tcggcagcgt
    12601 cgtgccgcag gccaccttca acattcgccg tctgtgcacg cggtatttcg actgcgagcc
    12661 gttggtgctg ggcgagtcga acgtcgttta cggcatcaag gtcaagggcc acggcgccgg
    12721 cgctgaccgc atctgcaaca ccgtgggcgc aagcgtcctg tttcccaaga cgccggtggt
    12781 cgtggtcgat ttcggcaccg ccacgacttt cgacgtggtc gacgaagaag gcagctactg
    12841 cggcggtgcg atcgcgcctg gcatcaatct cagcatcgag gcgctggtca atgcgacggc
    12901 gcagctgccg cgcatcgtcg tcgagaagcc caagcaggtg atcggcacca ataccgtggc
    12961 ctgcatgcat agcggcgtgt tctggggcta tgttggcctc atcgaaggca ttgtcgcccg
    13021 catcaaggcc gaattcggca agccgatgaa ggtgatctcc accggcggcc tcgccccggt
    13081 attcgacggc tcgacctcgg tgatcgagca gatcgtgccc gacatcaccg cgcgcggcct
    13141 gatcgagatt tttagacgca gcaagaaggc atgaccgtcc cgtcgaacga cgaactgctg
    13201 ttcctcgctt tgggcggggc cggcgagatc ggcatgaatc tcaatctgta cggccatgcc
    13261 ggcaaatggc tgatgatcga cctcggcatc ggcttcgccg acgattcgat gcccggcatc
    13321 gaagtggtga tgcccgatcc cgccttcatc gaggagcggc gcgacgcgct ggtcggcatc
    13381 gtgctgaccc atgcccatga ggaccacctg ggtgccgtcg ccgatctctg gccgcggctc
    13441 cgggcgccgg tctatgcgac gccgttcgcc gcctcggtgc tgcaacgcaa gctcgtcgag
    13501 gcggggctga tggatgccgt gccggtcacc gtgattccgc ttcgcggcaa gttcatcctg
    13561 ccgccgttcg agctcgagct gatcaccatg acgcattcga tcctcgagcc caatgcgctg
    13621 gcgatccgca cgaagctcgg cacggtgttc cacaccggcg actggaagat cgatcccgag
    13681 ccgcttctgg gcgaggtgac cgacgaggcg gtgctgcggc gcatcggcga ggagggcgcg
    13741 ctcgccatgg tgtgcgacag caccaacgtc ttcgtcgagg gcgaggcggg gtccgaagcg
    13801 acggtgcgcg tcaatctcga gaagctggtg aagacaagca aatgccgggt tgccgtcacc
    13861 tgctttgcct cgaacctggc acgcgtcgag agcgtggcgc tggccgcggt ggcggccggc
    13921 cgtcatccgg tgctgtcggg ccgggcgctg cagcgcatgg tcgacgccgc ccaggagtgc
    13981 ggctacctgc tcgatttccc gcaatgcata ccagagcagc aggcgggcta cctgccgcgc
    14041 gacaaggtgc tgttcatctg caccggcagc cagggcgagc cgcgcgcctc gatggccaag
    14101 ctcgccggcg gcgagcatcg cgacctggtg ctcgagaccg gcgacacagc gatcttctcc
    14161 tcgcgggtca ttcccggcaa tgaacgctcg gttggacgat tgcagaacgc gctgatggcg
    14221 cgtggcgtcg aggtcatcac cgaccgcgaa gccgatatcc atgtctcggg ccatccggcg
    14281 cgcgacgaac tggtgcgggt ctatcaatgg gtgagaccga agatcgccgt gccggtccat
    14341 ggcgaggtca ggca
//
LOCUS       DASWGA010000446         3338 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_303443, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000446 DASWGA010000000
VERSION     DASWGA010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303443"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..751)
                     /locus_tag="VF991_10665"
     CDS             complement(<1..751)
                     /locus_tag="VF991_10665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9556949.1"
                     /translation="MRALLPVVSLYIGKLIIDDVVQLVQLPQRPTSLTQWLDSGQLKG
                     LGALLLAEFALAILSDVLGRIVSLLDSLLSERVTNASSVSLMEHAATLDLEDFEDAEF
                     QDQLERARRQTSGRLTLMTQLFGQAQDIVTVASFAGGLLVYAPWLIALLVVALLPVFL
                     GEAHFNAQTYTLDFGRTPERRELDYVRQTAASVETAKEVKIFGLSRFLIERYRSLADA
                     FYAANRRLAVRRAGWGGVLTGIGTMGYYFAYA"
     gene            complement(903..1919)
                     /locus_tag="VF991_10670"
     CDS             complement(903..1919)
                     /locus_tag="VF991_10670"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9556950.1"
                     /translation="MEYRRLGRSGLKVSEICLGTMTFGNGADDAEAARMVGAAFDAGV
                     NFFDTANSYVGGVSETMLGKALKGRRHDAVVASKVFNPMGGRPNDSGMSRLHIKQQVE
                     DSLRRLQTDYIDVYYTHHIDVQTPLEEMLRAFDDLVRQGKILYTACSNYEAWRLLEAL
                     WLSDTHGWARFDAYQPQYSLVVRDIDEEIVPACQLKGLGVVAWSPLAGGYLAGKYTPG
                     SLKVQGTRSSEGWGFNSRFFAANHGEILQTLLDTAKQLNRSPAQTALRWVMDQPFITS
                     AIVGARNAQQLGETLGAGGWRLPAAALDKLNKVSAQPHRYPRAFEDTMVERRNSAIKM
                     PAKK"
     gene            complement(1956..2918)
                     /locus_tag="VF991_10675"
     CDS             complement(1956..2918)
                     /locus_tag="VF991_10675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556951.1"
                     /translation="MLGYRLFLVTLAALSLALGTQSANAQASRTWVSGASGVGDDANP
                     CSRSAPCKTFAGAISKTAPGGEISVLDPGGFGAVTITKSITIDGGGGQVASELVSGTN
                     GIVIQAGANDVVTLRNIRINGVVASTVPAGLNGIRFLSGAALHIEHCTIFGFSQNAID
                     INLNTASAARVFVTDTGLNHNAGGITARNAGAGTVFLALQRATLNQNSGFGLKVDGSG
                     AGGILAAVSDSVIAGNGTGLLAQGGPAIAATIQVTRSSVVHSTTTGAQSNGNGAFIFV
                     SNTLMSGNATALSASGGGSLQTYKNNSIDGNFAPGAFTGTLIPE"
     gene            complement(3001..>3338)
                     /locus_tag="VF991_10680"
     CDS             complement(3001..>3338)
                     /locus_tag="VF991_10680"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9556952.1"
                     /translation="ALEMEIDAVEMNELMFYSSLKTGDAPGNMGSVVKMRGTEVGQKV
                     TELAVEAVGWYGAPFTELRNYDSNIVPVGGDYVDDVAPRYFNARKTTIYGGSSEVQRN
                     VLAKAMLGL"
BASE COUNT          587 a         1100 c         1052 g          599 t
ORIGIN      
        1 aggcataggc gaagtagtag cccatcgtcc cgatgcccgt gagcacgccg ccccagccgg
       61 cgcgtcggac cgccagtcgc cggttggcgg catagaaggc gtcggccagg ctgcgatagc
      121 gctcgatcag gaaacggctc aggccgaaga tcttcacttc ctttgcagtc tcgacgctgg
      181 ccgccgtctg acgcacataa tcgagctcgc ggcgctccgg cgtgcggccg aagtcgagcg
      241 tgtaggtttg cgcgttgaag tgcgcttcgc ccaggaaaac gggaagcaac gccaccacca
      301 gcagcgcgat cagccagggt gcatagacca gcaatccgcc ggcgaagctg gcgaccgtca
      361 cgatgtcctg tgcctggccg aacagctggg tcatcagcgt gagccgcccg ctggtctgcc
      421 ggcgcgcccg ctcgagctgg tcctgaaact ccgcatcctc gaaatcctcc agatcgagcg
      481 tggctgcatg ttccatcagg ctgacgctcg aagcgttcgt cacacgctcc gacagcaggc
      541 tgtcgagcag cgacacgatc ctccccagca catcggacag gatcgcgagc gcgaattcgg
      601 ccagcagcaa cgcacccagc cccttgagtt gcccgctgtc cagccattgc gtcagactgg
      661 tcggccgttg cggcaactgc acgagctgca cgacgtcatc gatgatcagc ttgccgatgt
      721 agagtgagac gaccggcagc agcgcgcgca tcaaccgtaa cagcaacgac catacggtga
      781 gatgcgcgct cgtccgccac accatggcga ggaaaggccg cagcgtacgc agcgccccga
      841 agcgcgcctt caacgagccg acgttcgggg cagacggcat cggcaagccc tcggtgcgac
      901 gactacttct tcgccggcat cttgatcgcc gaattgcgcc gttcgaccat cgtgtcctcg
      961 aaggcgcgcg gatagcggtg cggctgggcc gacaccttgt tcaatttgtc gagcgccgcc
     1021 gccggcaggc gccagccgcc ggcgcccagg gtctcgccga gctgctgggc gttgcgcgca
     1081 ccgacgatgg cgctggtgat gaagggctgg tccatcaccc agcgcagcgc ggtctgcgcc
     1141 ggcgagcggt tcagttgctt ggccgtgtcg agcagggtct gaaggatctc gccgtgattg
     1201 gcggcaaaga accggctgtt gaagccccag ccttcggacg aacgcgtacc ctgcaccttg
     1261 agactgcccg gcgtgtattt gccggcaagg tagccaccgg caagcggcga ccaggcgacg
     1321 acacccagcc ccttgagctg gcaggccggc acgatctcct cgtcgatgtc gcgcaccacg
     1381 aggctgtatt gcggctggta ggcgtcgaaa cgcgcccagc cgtgggtgtc gctgagccac
     1441 agcgcctcca acaggcgcca cgcctcgtag ttcgagcagg cggtgtagag gatcttgccc
     1501 tgccgcacga gatcgtcgaa ggcgcgcagc atctcttcga gcggcgtctg tacgtcgatg
     1561 tggtgggtgt aatagacgtc gatgtagtcg gtctgcaggc gccgcagact gtcctcgacc
     1621 tgctgcttga tgtgcagccg cgacatgccc gaatcgttgg gtcgtccccc catcgggttg
     1681 aagaccttgg aggcgaccac ggcgtcgtgc cgccgcccct tcagcgcctt gcccagcatc
     1741 gtctccgaca cgcccccgac ataggagttg gcggtgtcga agaagttcac gcctgcatcg
     1801 aacgccgcgc ccaccatgcg agctgcttcg gcgtcgtcgg cgccgttgcc gaaggtcatg
     1861 gtgccgaggc agatctccga aactttcagc ccgctcctgc caagccgccg atactccatg
     1921 ccagcgcctt cctggttgct ttcccacaac gcctattatt ccggaataag agtacccgtg
     1981 aaggcgccgg gggcaaaatt cccgtcgatg ctgttgttct tgtaggtctg taaacttccg
     2041 ccgccgcttg cggaaagggc ggtggcgttc cccgacatca acgtattgga gacgaaaatg
     2101 aacgcgccgt ttccgttcga ttgtgcgccg gtcgttgtgc tgtgtacgac cgaggagcgc
     2161 gtgacctgga tggtggcggc gatggcgggg ccgccctggg ccagcaagcc ggtgccattg
     2221 cctgcgatca cgctgtcgga cacagccgcc aggatccctc cggcgccgct gccgtcgact
     2281 ttcaggccga agccgctgtt ttgattcagc gtcgcgcgtt gcagcgcgag gaagacggtt
     2341 ccggcgccgg cattgcgggc ggttatgccg cccgcattgt ggttgaggcc cgtatcggtc
     2401 acgaacacgc gcgcagcgga cgccgtgttc aggttgatgt cgatggcgtt ctggctaaag
     2461 ccgaagatgg tgcagtgctc aatgtgcagc gccgcgccgg acaagaagcg gatgccgttc
     2521 aggccagccg ggaccgtgga cgccaccacg ccgttgatcc ttatgttgcg caaggtcacg
     2581 acgtcgttcg cacccgcctg aatgactatt ccattcgtgc ctgacaccag ctccgacgca
     2641 acctgaccgc cgccgccgtc gatcgttatg gacttggtga tcgtcaccgc gccgaagccg
     2701 ccgggatcga gcacgctgat ctcaccgcct ggtgcggtct tggaaatggc gcctgcaaag
     2761 gtcttgcaag gcgccgaccg gctgcaggga ttggcatcgt cgcccacccc ggacgccccg
     2821 gagacccatg tacggctcgc ctgggcattc gctgactgcg tgccaagcgc caaggataac
     2881 gctgccagag tgacgagaaa aagcctgtag ccgagcattg ccgcctcccc cgctggtcga
     2941 gtcaacgcat cctcgacgcg atattctaca tcgcactttt acctaaagta gcaagaagcg
     3001 tcaaagtccc agcatggcct tcgccagcac gttcctctgc acctccgacg agccgccgta
     3061 gatcgtggtc ttgcgggcgt tgaagtagcg cggcgccacg tcgtcgacat agtcgccgcc
     3121 gaccgggacg atgttgctgt cgtagttgcg aagctcggtg aagggggcgc cgtaccagcc
     3181 gactgcttcc accgcgagct cggtcacctt ctggccgact tcggtgccgc gcatcttgac
     3241 caccgagccc atgttgcccg gcgcatcgcc ggtcttgagg ctggaataga acatcagctc
     3301 gttcatctcg acggcgtcga tctccatctc cagcgccg
//
LOCUS       DASWGA010000447         3906 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1700722, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000447 DASWGA010000000
VERSION     DASWGA010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3906
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1700722"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VF991_10685"
     CDS             <1..180
                     /locus_tag="VF991_10685"
                     /inference="COORDINATES: protein motif:HMM:NF020135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketopantoate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9556953.1"
                     /translation="SMAQDIRKGRRTEIEFMNGYIADRGNYIGVPAPTHAKLTEIVNK
                     VERQEVKAAPALLGG"
     gene            384..1346
                     /locus_tag="VF991_10690"
     CDS             384..1346
                     /locus_tag="VF991_10690"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9556954.1"
                     /translation="MRRRLLVAGALLPAMAQAQTVVRRFRLGVLMLAVGESEYMADLI
                     ARLAELGYRQGGNLEIEQRSAEGDPARLGALAAELIASRPDLLIAGFGTLTAKALKAA
                     TSTIPIVFTRVGDPVGAGVVASLNRPGGNVTGTTDQASELSGKRLDLLREVTGGASFA
                     VLMNPDTPFSTLALADLERAAAGQQVGLIVLRARTPQEVTASLASLKDGAQAGLMVLE
                     DPTTDSARSDIVSFAVAHRLPSMFVTREAVAVGGLMAYGVDRRRSYRRAADYVDQILK
                     GAKPADLPVEQPTEFHLVVNLRTAKAIGIALPPAILVRADEVIE"
     gene            complement(1354..1788)
                     /locus_tag="VF991_10695"
     CDS             complement(1354..1788)
                     /locus_tag="VF991_10695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556955.1"
                     /translation="MIKVLFAAALGGLCGGVALAQSSMTGAVKPFASVPFAPDPDVAC
                     LGSALETGNPLTGPSTVILKASAGCVVPWHSHTAQEQLIVVAGEVMAEMTGHPPTLLG
                     PGGFAMMAGRMAHQFTCQGRDGCVMFVTFDRAYDITWEKAGR"
     gene            complement(1860..3152)
                     /locus_tag="VF991_10700"
     CDS             complement(1860..3152)
                     /locus_tag="VF991_10700"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9556956.1"
                     /translation="MSASVTPASPSDLPWWKEPTKDQWYAYVAAWLGWTLDAFDFTIF
                     LLIMLPISQEFGVPLTAVTIIFTLTLWMRLVGATAAGWMGDRMGRKTPLMISILWYSI
                     CNFIAGFSPSFTFLLIFRTLLGIGMGAEWPAGAALAMESWPARSRGFMSGVLQGSWGL
                     GFALSAAAYGLFYDDIGWRGLLWMGILPALVVVWIRFYVKEPEVWAENKRQQVEKKAE
                     VKLPLFVIFRREYLYNTLTACAWMASAFCVYYSIWALFSSYLQKELQWTAAMIATPLF
                     IANIVVFAGNGLWGVVADWLGRRPAIILPAVIGIVVTPLYLMTKDPEWIVGGFILQGI
                     CGGAIYGQNPSYLCERFPTEVRATASGFVYHQGAIWGGLVAPALSYFAIEMKLGFALP
                     MMISTMFFLALVVVFVLMGPETKGKVLTADLETLKAAD"
BASE COUNT          726 a         1289 c         1270 g          621 t
ORIGIN      
        1 tcgatggccc aggacatccg caagggccgc cgcaccgaga tcgagttcat gaacggctac
       61 atcgccgacc gcggcaacta tatcggcgtg ccggcgccga cccacgccaa gctgaccgag
      121 atcgtcaata aggtcgaacg ccaggaagtc aaagccgcgc cggcgctgct ggggggttag
      181 ctcgctgtca tcctgagcgt agcgaaggat ctcatgccgg tggcaagcgg cgatgaggtc
      241 cttcactgcg ttcaggacga cagatcatga gcgggcctgg aggccctcag gcgcatgtga
      301 atgcgccgag tccggcatga catgacaaga aaaacaatgc ttcaccgtcg tcatctcctg
      361 gctgccgccg accaggcgat cgaatgaggc ggcgcctgct tgttgccggt gcgttgttgc
      421 ccgcgatggc gcaggcccag actgtggtcc gccgctttcg cctcggcgtg ctgatgctgg
      481 cggtcggcga aagcgagtac atggccgacc tgatcgcgcg gctcgccgag ctgggctacc
      541 gtcaaggcgg caatctcgaa atcgagcagc gctccgccga aggtgatccg gcgcggctcg
      601 gtgcgctggc tgctgagctc atcgcgtcgc gacccgatct tctgatcgca ggcttcggca
      661 cgctgaccgc caaggcgctg aaggccgcga cctcgaccat ccccatcgtc ttcaccaggg
      721 tcggcgatcc ggtgggcgcc ggcgtggtgg cgagcctcaa ccggcctggc ggcaacgtga
      781 ccggcacgac cgaccaggcg agcgaactca gcggcaagcg gctcgacctc ctgcgcgagg
      841 tgacgggcgg cgcgagcttc gccgtgctga tgaatcccga cacgccgttc agcacgctgg
      901 cgctcgccga tctcgagcgc gccgccgcgg ggcagcaggt cggactgatc gtgctgcgcg
      961 cgcgcacgcc gcaggaggtg acggcatcgc tcgccagtct gaaagacggt gcgcaggccg
     1021 ggctgatggt gctggaggat ccgacgaccg acagcgcccg ctccgacatc gtttcctttg
     1081 ccgtggcgca tcggcttccg tcgatgttcg tcacccgcga ggccgtcgcc gtcggcgggc
     1141 tgatggccta cggcgtcgac cggcgccgga gctatcggcg cgccgccgac tatgtcgacc
     1201 agatcctgaa gggcgccaag cccgccgacc tgccggtcga gcagccaacc gagtttcatc
     1261 tggtggtcaa ccttcgcacc gccaaggcca tcgggatcgc cctaccgccc gcgattctcg
     1321 tccgcgccga cgaggtgatc gaatgaggcg cactcagcgg ccggcttttt cccatgtgat
     1381 gtcgtaggcc cgatcgaagg tgacgaacat cacgcatccg tccctgccct ggcaggtgaa
     1441 ctggtgcgcc atgcggcctg ccatcatggc gaagccgccg ggcccgagca gggtcggcgg
     1501 atgaccggtc atctccgcca tcacctcgcc ggcaaccacg atcagctgct cctgggcggt
     1561 gtgggaatgc cacggcacga cgcagccggc ggatgccttg aggatcacgg tcgacgggcc
     1621 ggtaaggggg ttcccggtct cgagcgccga gccaagacag gccacgtcgg gatcgggcgc
     1681 aaagggcacc gaagcgaagg gcttcacagc tcctgtcatt gagctttgcg caagggcgac
     1741 gccgccgcac aggccgccca gcgcggccgc gaacagaacc ttgatcatcc ctgccttgta
     1801 cagcacgccg tcgaatcgat ctccctcccc aacttcgttg gggaggatcg ttaggtgtgc
     1861 tagtccgccg ccttcagggt ctcgagatcg gcggtcagga ccttgccctt ggtctccggg
     1921 cccatcagca cgaacaccac gaccagcgcc aggaagaaca tggtgctgat catcatgggc
     1981 agggcaaagc ccagcttcat ctcgatggcg aaatagctca gtgccggcgc caccaggccg
     2041 ccccagatcg cgccttgatg gtagacgaag cccgacgccg tggcgcgcac ctcggtcggg
     2101 aagcgctcgc agagatagct cgggttctgg ccgtagatcg cgccgccgca gatgccctgc
     2161 aggatgaagc cgccgacgat ccattccgga tccttggtca tcaggtaaag cggcgtgacg
     2221 acgatgccga tcacggcggg caggatgatg gcgggccggc ggcccaacca gtcggcgacg
     2281 acgccccaca ggccgttgcc ggcgaagacc acgatgttgg cgatgaacag cggcgtggcg
     2341 atcatcgccg ccgtccattg cagctccttc tgcaggtagg acgagaacag cgcccagatc
     2401 gagtagtaga cgcagaacgc cgaggccatc caggcgcagg cggtcaacgt gttgtagagg
     2461 tactcgcgcc ggaagatcac gaacagcggc agcttgacct cggccttctt ctcgacctgc
     2521 tggcgcttgt tctcggccca cacctcgggc tctttcacgt agaagcggat ccatacgacg
     2581 acgagcgccg gcaggatgcc catccataac aggccgcgcc aaccgatgtc gtcgtagaac
     2641 aggccgtagg ccgccgccga cagcgcgaag cccagtcccc acgagccctg caggacgccg
     2701 ctcatgaagc cgcgcgagcg ggccggccac gattccatgg cgagcgccgc gccggccggc
     2761 cattccgcgc ccatgccgat gccgagcaga gtgcggaaga tcagcaggaa ggtgaagctg
     2821 ggcgagaagc cggcgatgaa gttgcagatc gagtaccaca ggatggagat catcagcggc
     2881 gtcttgcgcc ccatgcgatc gcccatccag ccggcggcgg tggcgccgac cagtcgcatc
     2941 cacagcgtca gcgtgaagat gatcgtgact gcggtcagcg gcacgccgaa ctcctgggag
     3001 atcggcagca tgatcagcag gaagatggtg aaatcgaacg catcgagcgt ccaaccgagc
     3061 caggcggcga cgtaggcgta ccactggtcc ttggtgggtt ccttccacca cggcaaatcg
     3121 gatggcgagg caggcgtgac ggacgcggac atctgctaaa cctccctggg tgggatgaag
     3181 gtttacgctg agatactccg actatcggta ctgacgcaga gccatagtgc gcccatcgca
     3241 ggccactgac aacccatggg cgtttgctgg gagcgcgcca ctgcgcgcgg agtaacctcc
     3301 gcgctgaagt ggcgcgtcat aatcttccgg accgcgggcg tctcagcgcg gaggttactc
     3361 cgcgcgaccc gctcataatc ttccggaccg cgagcatgaa agacgcgtca cggcgataaa
     3421 cctttacccc ctctatggtg cgcacttatt attctggtga gtgcccacca aaagtttcac
     3481 ttgacattct tcggaatgtc acttacgttt tcccgaccgc tgccgagatc cgtcggcagg
     3541 ctccggttca ggcgcccatc cttttcctgg gaatggcggt gcgcgccgat ccgtcatgcc
     3601 tgccgccggg gtcgtccggc ggtcccgcag gcctcaaaaa cgactaccgg aaacgccgga
     3661 aataccggaa acccctcctg gagtgcatcc cttggatgag acagcaaaac tgcagacagc
     3721 ttggtcatcg gctgaatcgg caaaagggta gcggaaagtg cggaaacctc ccgcgcccgt
     3781 gcagtcccca gggccgaact cgcgccgcgg aagggcagcc cgagtgacgc ccggcctatg
     3841 ccgcgtactt gctgccgctc agcgacgccc acagcgcgtc aggtccggcc ttggcgtagg
     3901 cggcgc
//
LOCUS       DASWGA010000448         7670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1816882, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000448 DASWGA010000000
VERSION     DASWGA010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7670
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1816882"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1927
                     /locus_tag="VF991_10705"
     CDS             <1..1927
                     /locus_tag="VF991_10705"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9556957.1"
                     /translation="SGLIQPGSLLNWEYRLRLPPGTSDVAAINALKNRFPDAGWRVRG
                     LAEAGGGIRFWLDRLTQFIGLIGLASLLVGGVGVGNAISTFLAGRLRTIAIMKCLGAP
                     ERLVFSTYFIQLTALALLGILVGLAIGAALPFLAQSVIAEVLPVRARVALYGEPLAIA
                     ASFGLLVSLLFTLMPLMRARRVPAATLMRGAVAAAGGRLPWRDALLIGAVAMALAAFT
                     IFTADSRAIAGWFVLGAVAAFVAFPLLARLLMMAAAHAGKPRLAGLRLALANLHRPGA
                     PTPIVMLSLGLGLTVLVATALIEGNLREQLTRRIPSDAPAFFFVDIQSTQMPDFEKAL
                     AAIPGAGPLDKVPSLRGRIVKIGGRPVNEMAVPPEARWAVEGDRGVTYAATPPEGSRI
                     VAGQWWPSDYRGPQLISFDETLAKAFGLGLGDTITVNVLGRDIEAKIASLRRIEWTTL
                     SINFVFVYSPGILDKAPHTFLATVKAKPDAEDAIFKTVTEQFPNVTVVRIRDAIETAA
                     DVLGNIGLASRVIGFLSILAGVLVLAGAMLATQQRRVHEAVVMKVLGATRARIAGIFA
                     WEFAALGLATAVAALGVGTLGAYLVVHRLMGLDWTFLPAVAVAVALGAMAVTLAFGLA
                     GTLAALRQRPLALLRNE"
     gene            2065..2814
                     /locus_tag="VF991_10710"
     CDS             2065..2814
                     /locus_tag="VF991_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014766364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEX9556958.1"
                     /translation="MANPDFGTFNRAGTVADQATFDVGLRAHMLRVYNYMASGLALSG
                     IVAFALFSSAELAGLFFQVQAGRVVGLNVLGWVAIFAPLGLLLLTSFRAAKMSVGAVQ
                     AVYWAVTALMGVSLSLLLFRYTGASVARTFFVTAAAFGALSLYGYTTKRDLTAFGKFL
                     FMGVIGLILAGLVNMIWPSGTMSFIISAAGVLIFSGLIAYDTQKIKEQYAEAWGTEVA
                     QKIAIFGALSLYLDFVNLFQFLMAFMGQDRE"
     gene            2876..4036
                     /gene="nhaA"
                     /locus_tag="VF991_10715"
     CDS             2876..4036
                     /gene="nhaA"
                     /locus_tag="VF991_10715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HEX9556959.1"
                     /translation="MNRLKAFIDSEAASAVPLLAATVLALALANSPLAGPIEAALETR
                     LGVSWTFVELSKPLLLWINDGLMAIFFLLVGLEIKREVVEGELSQPSQVALPIAGALG
                     GMVVPGLIYAAVNWRDPVALGGWAIPTATDIAFSLGVLAALGSRVPLALKVFLTTLAI
                     VDDLGAIVIIAAFYTDQLSLMALAFAAVFIAGLAVLNLTGVRRLAPYLLLGTALWLSV
                     LKSGVHATLAGVVLALFIPLKSAGEADAARPAIWLEHVIKPWSAWLIMPVFAFANSGL
                     SLAGLSLSSLLQPVSLGIVMGLFLGKQIGILLGAGLLIALGIAVMPTGGSWRRLYGVA
                     ILGGIGFTMSLFIGTLAFDDGAHETQVRLGVLAGSLLSAAAGYLVLRLAPGR"
     gene            4115..4621
                     /locus_tag="VF991_10720"
     CDS             4115..4621
                     /locus_tag="VF991_10720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9556960.1"
                     /translation="MRRTSYEQMNCSIASALDIVGEPWTLLIVRDAFYGVRRFDDFQE
                     NLGIARNVLTARLKKLVEAGIFRKTAYRQRPLRHEYRLTDKGAALFTVIVGLKQWGDR
                     YGAAARSGKPMDLVDRGNGHPLEPVLIDADTGQRLELTNVRAVAGPGADQGTRAFFER
                     LALNRSPR"
     gene            complement(4618..4818)
                     /locus_tag="VF991_10725"
     CDS             complement(4618..4818)
                     /locus_tag="VF991_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008190160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4169 family protein"
                     /protein_id="HEX9556961.1"
                     /translation="MADIVNLRRARKDKARRERESEAAANRRRFGRTKAQKAADKDAA
                     ARGRRDLDGKLLEPEKDGGENS"
     gene            4910..5032
                     /locus_tag="VF991_10730"
     CDS             4910..5032
                     /locus_tag="VF991_10730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556962.1"
                     /translation="MTPSPGVGNLIPGQGGPQPSRSPVPNLPIPIPNVPGLFGR"
     gene            5042..5872
                     /locus_tag="VF991_10735"
     CDS             5042..5872
                     /locus_tag="VF991_10735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX9556963.1"
                     /translation="MLDRLLAVLTARFGSAPALKEAPKGADVLADMANRRVMRRYLDK
                     PVDPALLDTLCAVALSAPSKSDLQQADIVIVSDRAQREKLEALLPDNPWVKAAPVFLV
                     FCGNNRRHRLLFDWRSRPFVNDYLDPFFNAAVDAGIVLATFIAAADRAGLGSCPISAI
                     RNHAAEVSDILGLPRHVFPVAALGAGWPSFEGVMSPRLGLDVTIHRDRYDESGLREKI
                     AAYDRRREAVQPYKTQRYTDKFGSSADYGWSEDKARQYSVPERADFGAFVRAKGFRLD
                     "
     gene            complement(5859..6080)
                     /locus_tag="VF991_10740"
     CDS             complement(5859..6080)
                     /locus_tag="VF991_10740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018324316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEX9556964.1"
                     /translation="MRKRSVTIDGHRTSVSLEDAFWAELSSIAEARGLSLNALVAEID
                     HARAAPGNLSSTLRLYVLDQLRKRTISRA"
     gene            6180..>7670
                     /gene="typA"
                     /locus_tag="VF991_10745"
     CDS             6180..>7670
                     /gene="typA"
                     /locus_tag="VF991_10745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEX9556965.1"
                     /translation="MNIRNVAIIAHVDHGKTTLVDCLLKQSGTFRENQQVAERAMDSN
                     DLERERGITILAKATSVVWKGTRVNIVDTPGHADFGGEVERILSMVDGVVLLVDAAEG
                     PLPQTKFVLGKALRLGLRPIVLINKVDRTDARPHQVHDEVFDLFSALEANDQQLDFPT
                     LFASARQGWAATSLEAEHKDMEPLFDLILRHVPAPHIEADKPFRMLVTTLESDAFLGR
                     ILTGRIHSGAIKPNTILKSLSRDGREIEQTRITKVLAFRGLERVALDIAEAGDIVAVA
                     GFKTATVADTICDQSVEWALPAQPVDPPTLAMTFSVNDSPLAGKEGDKVTTRMIRARL
                     MREGEGNVAIRVTDTENADSYEVAGRGELQLGVLIETMRREGFELAVGRPRVLFENDP
                     VTGQRLEPIEEVVIDVDDAYTGVVVEQISVRKGELQDMRPSGAGKTRLVFYAPSRGLI
                     GYHGEFLTDTRGTGVMNRIFHEYGPYRGTIAGRRNGALIANDEGTAV"
BASE COUNT         1104 a         2614 c         2512 g         1440 t
ORIGIN      
        1 atcgggcctc atccagcccg gcagcctgct gaactgggag taccggctgc gcctgccgcc
       61 tggcacgtcc gatgtcgccg ccatcaacgc gctcaagaac cggtttcccg atgccggctg
      121 gcgggtgagg gggctcgccg aggcgggcgg cggaatccgc ttctggctcg accggctgac
      181 ccagttcatc ggcttgatcg gcctcgcctc gttgctggtc ggcggcgtcg gtgtcggcaa
      241 tgccatttcg acctttttag ccgggcgcct gcgcaccatc gccatcatga agtgtctcgg
      301 cgcgcccgag cggctggttt tctcgaccta tttcatccag ctcacggcgc tcgccctgct
      361 cggcatcctg gttggcctgg cgatcggtgc cgccctgccg ttccttgccc aatcggtgat
      421 cgccgaagtg ttgccggtgc gcgcgcgggt ggcgctctat ggcgagccgc ttgccatcgc
      481 cgcttcgttc ggcctcctgg tctcgctgct gttcaccctg atgccgctga tgcgggcgcg
      541 ccgcgtgccg gccgcgaccc tgatgcgcgg cgccgtggcc gcggccgggg gcaggctgcc
      601 gtggcgcgac gcgttgctga tcggcgccgt cgccatggcg ctggcggcct tcaccatctt
      661 caccgccgac agccgcgcca tcgccggctg gttcgtgctg ggcgcggtgg cggctttcgt
      721 cgctttccca ttgctggcgc ggctcctgat gatggcggcg gcgcatgccg gcaagccccg
      781 gctggccggc ctgcggctgg cgctcgccaa cctgcaccgg ccgggcgcgc ccacgccgat
      841 cgtcatgctc tcgctggggc ttggcctcac cgtgctggtg gcgacggcgc tgatcgaggg
      901 caatctgcgc gagcagctga cgcgccgcat cccgagcgat gcgccggctt ttttcttcgt
      961 cgacatccag tcgacccaga tgcccgactt cgaaaaggcg ctcgccgcca tcccgggcgc
     1021 cgggccgctc gacaaggtgc cctcgctgcg cggccgcatc gtcaagatcg gcggcaggcc
     1081 ggtcaacgaa atggcggtgc cgccggaggc gcgctgggcg gtcgagggcg accgcggcgt
     1141 cacctatgcg gcaacgccgc ccgagggctc gcgcatcgtg gccgggcagt ggtggccgtc
     1201 ggactatcgc gggccgcagc tcatctcgtt cgacgagacg ctggccaagg cgttcggcct
     1261 ggggctgggc gataccatca cggttaacgt gctgggtcgc gacatcgaag cgaaaatcgc
     1321 ctcgctgcga cgcatcgaat ggacgacgct ttccatcaat ttcgtcttcg tctattcgcc
     1381 gggcatcctc gacaaggcgc cgcacacttt cctcgccacg gtgaaggcca agccggacgc
     1441 cgaggacgcc atcttcaaga ccgtcaccga gcagtttccc aacgtcacgg tggtgcgcat
     1501 ccgcgacgcc atcgagaccg ccgccgacgt gctgggcaat atcggcctgg ccagccgggt
     1561 cattggcttc ctcagcatcc tggccggggt gctggtgctg gccggcgcca tgctcgccac
     1621 ccagcagcgc cgcgtgcacg aggccgtggt gatgaaggtg ctgggcgcca cgcgggcgcg
     1681 gatcgccggc atcttcgcct gggagttcgc agccctcggc cttgccactg ccgtggcggc
     1741 cctgggcgtc ggcaccctcg gcgcctattt ggtggtgcac cgcctgatgg ggctcgattg
     1801 gaccttccta cccgccgtcg ccgtggcggt ggcgctgggc gccatggcgg tcacgctcgc
     1861 tttcggtctg gcgggcaccc tggcggcgct gcgccagcgt ccgctggccc tgctgcgcaa
     1921 cgaataggcg gaaaattcac ctgcctgtga aagtaaatcg caacattaca aggcgttaac
     1981 gctattgatt catacgggct gagtgcccag attgggaacc gaaagggggc tcggcaatga
     2041 ggcccccgtg gaggctgaat ccaaatggcg aatcctgact ttggtacgtt caatcgcgcc
     2101 ggcaccgttg ccgaccaggc aacgttcgat gtcggtctgc gcgcgcacat gctgcgcgtc
     2161 tacaactaca tggcttcggg gctcgcgctg tcgggcatcg tggcctttgc cctgttcagc
     2221 tcggccgaac tcgcgggcct gttcttccag gtgcaggcgg gccgtgtcgt cggtctgaac
     2281 gtcctgggtt gggtcgcgat cttcgcgccg ctgggcctct tgctgctgac ctccttccgc
     2341 gccgcgaaga tgagtgtcgg cgccgtacag gcggtctact gggcggtcac cgccttgatg
     2401 ggcgtcagcc tctcgctgct gttgttccgc tataccggcg catcggtggc ccgcaccttc
     2461 ttcgtcacgg ccgccgcctt cggtgcgttg agcctttacg gctacacgac caagcgcgac
     2521 ctgacggcgt tcggcaagtt cctgttcatg ggcgtgatcg gcctgatcct ggctggcctc
     2581 gtcaacatga tctggccgtc gggcacgatg agcttcatca tctcggccgc tggcgtgctg
     2641 atcttctcgg gtctgatcgc ttacgacacc cagaagatca aggagcagta tgctgaggcc
     2701 tggggcaccg aggtggcgca gaagattgcc atcttcggtg cgctcagcct ctacctcgac
     2761 ttcgtcaacc tgttccagtt cctcatggct ttcatgggcc aggatcgcga atagccgaaa
     2821 tccagatttc caacgagacg cccgggtcgc aaggcccggg cgttttgctg ttcgcgtgaa
     2881 ccgactaaaa gccttcatcg acagcgaggc ggcgtcggcc gtgccgcttc tggcggcgac
     2941 tgtgctggcg ctggcgctgg cgaactcgcc gctcgccggc ccaatcgagg ccgcgctcga
     3001 gaccaggctc ggcgtttcct ggacgttcgt cgagctcagc aagccgctgc tgctttggat
     3061 caacgacggg ttgatggcga tcttcttcct gctggtcggg ctggagatca aacgcgaggt
     3121 cgtcgagggc gagctgtcgc agccctcgca ggtggcgctg ccgatcgccg gcgcattggg
     3181 cggcatggtc gtgcccggtc tgatctatgc cgccgtgaac tggcgcgatc cggtggcgct
     3241 cggcggctgg gcgatcccga ccgccaccga catcgccttt tcgctcggcg tcctggcggc
     3301 gctgggcagc cgtgtaccgc ttgccctaaa agtcttcctg accacgctcg cgatcgtcga
     3361 cgatctcggc gccatcgtca tcatcgccgc cttctacacc gaccagctct cgctcatggc
     3421 gctggccttc gccgcggttt tcattgcggg tcttgcggtt ctcaacctga ccggcgtgcg
     3481 tcgcctggcg ccctacctgt tgctggggac ggcgttgtgg ctgtcggtgc tgaagtcggg
     3541 agtgcatgcc accctggccg gcgtggtgct cgccctcttc atcccgctga agagtgccgg
     3601 cgaggccgac gcggcgcgtc cggcgatttg gctcgagcat gtgatcaaac cgtggtcggc
     3661 ctggttgatc atgccggtct tcgcctttgc caattcaggg ctttcgctcg ccggcctgtc
     3721 gctgtcgagc ctgctgcagc cggtatcgct cggcatcgtc atggggctct ttctcggcaa
     3781 gcagatcggc atcctgctgg gcgccggcct gctgatcgcg ctcggcattg ccgtcatgcc
     3841 gaccggcggc tcgtggcgcc gtctgtatgg cgtggcgatc ctgggcggca tcggcttcac
     3901 catgagcctg ttcatcggca cgctcgcctt cgacgatggc gcgcacgaga cgcaggtaag
     3961 actgggcgtg ctggcgggat cgctgctctc ggcggcggcg ggttatctcg tgcttcggct
     4021 ggcgcccggc cgttaggcgc cgcggcacgc ggcggcaaaa tttgcgccca ctcggccaga
     4081 ttgcgcggcg ctcccgccgg cctatacttt ccgcatgcgt cgcacctcct acgaacagat
     4141 gaattgttcg atcgcctcgg cgctcgatat cgtgggcgag ccgtggacgc tgctgatcgt
     4201 gcgtgatgcc ttctacggtg tacgccgctt cgacgacttc caggagaatc tcggcatcgc
     4261 gcgcaatgtg ctgacggcgc ggctgaagaa actcgtcgag gccggcatct tccgcaagac
     4321 cgcctatcgc cagcgtccgt tgcgtcatga atatcgcctg accgacaaag gtgcggcgct
     4381 gttcaccgtc attgtcggac tgaagcaatg gggcgaccgc tacggcgccg cggcgcgcag
     4441 cggcaagccg atggatctgg tcgaccgtgg caatggccac ccgctcgagc cggtgctgat
     4501 cgacgccgac accggccagc ggctggaact caccaacgtc cgcgccgtgg ccggaccggg
     4561 cgccgatcag ggcacgcgcg ctttcttcga gcggctcgcg ctcaaccgct cgccgcgcta
     4621 ggaattttcg cccccgtctt tttccggttc cagcagcttg ccgtcgaggt cgcgacggcc
     4681 gcgtgccgcg gcgtccttgt ccgccgcctt ctgggccttg gtccggccga agcggcggcg
     4741 gttggcggcg gcttcgcttt cgcgttcgcg ccgcgccttg tctttgcgcg cgcgcctcag
     4801 gttgacgatg tcggccatat tttcggtcgc cgtgatagtc ccaaaagcct atgccgcgcc
     4861 gccggccgat gcgctagtgt tcatcgattc cggcttgcgg gagcatctca tgaccccttc
     4921 gcccggtgtc ggcaacctga tccccgggca gggcgggccg cagccgtcgc gttcgcccgt
     4981 gccgaacctg ccgatcccca tccccaacgt tccaggcctg ttcggccgct gaggagttct
     5041 cttgctcgat cgtctattgg ccgtgctcac agcacgcttc ggttccgcgc cggcgctcaa
     5101 ggaagccccc aagggagccg atgtcctggc cgacatggcc aaccgccgcg tcatgcggcg
     5161 ctacctcgac aagccggtcg atccggcgct cctcgatacg ctctgcgcag tggcgctgtc
     5221 ggcgccctcc aagagcgatc tgcagcaggc cgacatcgtg atcgtgtccg atcgagctca
     5281 gcgcgagaag ctcgaggcgt tgctgcccga taatccctgg gtcaaggccg cccccgtctt
     5341 cctggtgttc tgcggcaaca accgccgcca ccggctgctg ttcgactggc gcagccggcc
     5401 gttcgtgaac gactatctcg acccgttctt caatgccgcc gtcgatgccg gcatcgtgct
     5461 cgccaccttc atcgccgcgg cggaccgggc gggattgggc agctgtccga tcagcgccat
     5521 ccgcaaccat gccgctgagg tctccgacat tcttggcctg ccgcggcatg tctttccggt
     5581 cgcggctctg ggcgccggct ggccgtcctt cgagggcgtg atgagtccca ggctcggcct
     5641 cgacgtcacg atccatcgcg accgctacga cgaaagcggc ctgcgggaga agatcgcggc
     5701 ctacgaccgg cggcgcgagg cggtgcagcc ctacaagacc cagcgctaca ccgacaagtt
     5761 cggctcgagc gccgactacg gctggtcgga ggacaaggcc cggcaatatt cggtgccgga
     5821 acgtgccgat ttcggcgcat tcgtgcgcgc caagggtttt aggctcgact gatcgtgcgc
     5881 ttgcgcagtt ggtccagcac gtaaagccta agcgtgctcg acagatttcc aggcgcggcc
     5941 cgcgcatggt cgatctcggc gaccagcgcg ttgagggaca ggccgcgcgc ctcggcgatc
     6001 gacgaaagct cggcccagaa ggcgtcttcc agcgacactg acgtgcggtg gccgtcgatg
     6061 gtgaccgagc gtttgcgcat ggttggactg tggcagcggc aagccgccgc ctcaacctgc
     6121 cttgccgatg tcacaggcca tgcgtatata ccgcgcccaa caatccctcc ggacgacaaa
     6181 tgaacatccg caacgtcgcg atcatcgcgc acgtcgatca tggcaagacc acgttggtcg
     6241 attgcctgct gaagcagagc ggcaccttcc gcgagaacca gcaggtggcc gagcgcgcca
     6301 tggattcgaa cgacctcgag cgcgagcgcg gcatcaccat cctcgccaag gcgacctcgg
     6361 tcgtctggaa gggcacgcgc gtcaacatcg tcgacacgcc gggccatgcc gatttcggcg
     6421 gcgaggtcga gcgcatcctg tcgatggtcg acggcgtggt gctgctggtc gatgctgccg
     6481 aaggcccgct gccgcagacc aagttcgttc tcggcaaggc gctgcgcctg gggctgcggc
     6541 cgatcgtgct gatcaacaag gtcgaccgca ccgatgcgcg gccccatcag gtgcacgacg
     6601 aggtctttga cctgttctcg gcgctcgagg ccaacgacca gcagctcgat ttccccaccc
     6661 tgttcgcttc cgcccgccag ggctgggcgg cgacatcgct ggaggccgag cacaaggaca
     6721 tggaaccgct gttcgacctc atcctgcgcc acgtgccggc gccgcatatc gaggccgaca
     6781 agccgttccg catgctggtg acgacgctcg agtccgatgc gttcctcggc cgtatcctga
     6841 ccgggcgcat ccactccggt gcgatcaagc caaacactat tctaaagtcg ctgagccgcg
     6901 acggccgcga gatcgagcag acccgcatca ccaaggtgtt ggccttccgc ggtctggagc
     6961 gcgtggcgct cgacatcgcc gaggccggcg acatcgtggc cgtggcgggc ttcaagacgg
     7021 cgaccgtagc cgacacgatc tgtgaccagt ccgtcgaatg ggcgctgccc gcccagccgg
     7081 tcgatccgcc gacgctcgcc atgaccttct cggtcaacga ttcgccactg gccggcaagg
     7141 aaggcgacaa ggtcacgacc cgcatgatcc gcgcgcgcct gatgcgcgag ggcgagggca
     7201 atgtcgccat ccgcgtcact gacaccgaaa acgccgattc ctatgaagtc gccggtcgcg
     7261 gcgagctgca gttgggcgtg ctgatcgaaa ccatgcgccg cgagggcttc gagctcgccg
     7321 tcggtcgccc gcgcgttctt ttcgagaacg atccggtcac tggccagcgc ctcgagccga
     7381 tcgaggaagt ggtgatcgac gtcgatgacg cctacaccgg cgtcgtcgtc gagcagattt
     7441 cggttcgcaa gggagaattg caggatatgc gcccgtcggg cgccggcaag acccgcctgg
     7501 tgttctacgc cccgtcgcgc ggcctgatcg gctaccacgg cgaattcctg accgacacgc
     7561 gcggcaccgg cgtgatgaac cgcatcttcc acgaatacgg tccctatcgc ggcacgatcg
     7621 ccggccggcg caacggcgcg ctgatcgcca acgacgaggg caccgcggtg
//
LOCUS       DASWGA010000449         2266 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2081807, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000449 DASWGA010000000
VERSION     DASWGA010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2081807"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..251
                     /locus_tag="VF991_10750"
     CDS             84..251
                     /locus_tag="VF991_10750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556966.1"
                     /translation="MSLRSITVLVALILLQLCGCVTASKPSDPSVNELERRHDEMMQR
                     MGGGSGGGSGM"
     gene            complement(268..1221)
                     /locus_tag="VF991_10755"
     CDS             complement(268..1221)
                     /locus_tag="VF991_10755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019861481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlxA family transcriptional regulator"
                     /protein_id="HEX9556967.1"
                     /translation="MAKLHRIALLAYEGCQLLDVTGPAAVFGAANEASGRPVYDLRIV
                     SPDGGVVVSNSGVALHSRRIGGQPDTLLVAGGSRGLKTVTARADVRRWLAKAAPGAKR
                     YGSVCTGAFVLAAVGLLDGRRVATHWASCDRLARNFPALEVDADSLYVVDGKVWTSAG
                     VTTGIDMALALVEADLGAAVANLIARHFVLYARRPGYQSQFSPLLQAQTAAEAPFVGL
                     IDWMQAHLDRPLDVPALAQRAGLSERSFYRKFTEATGKTPAHFVESLRLEAARTLLAQ
                     GLPLKAIASRVGLSSPARLGQAFERRFGMPPSLFREMHRAA"
     gene            1380..2066
                     /locus_tag="VF991_10760"
     CDS             1380..2066
                     /locus_tag="VF991_10760"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEX9556968.1"
                     /translation="MAEPVQIGILLYPNVTQLDATGPAQVLCRVPGAKLHMIWKTCDP
                     VPTDAGFSIVPTTSFADCPQLDVICVPGGGGQVELMTDPETLDFLRKQAAGARYVTSV
                     CTGSLVLGAAGLLKGYRSACHWAWRDMLKDFGAIPVAERVVRDRNRISGGGVTAGIDF
                     GLTVAAELAGEEVAKSIQLVLEYDPQPPFDSGSPEKAGPERVKRLRERLAPLLKTRAK
                     ANAEAAARLH"
     gene            complement(2099..>2266)
                     /locus_tag="VF991_10765"
     CDS             complement(2099..>2266)
                     /locus_tag="VF991_10765"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEX9556969.1"
                     /translation="QLGVQSGRVLNGEDPGELPVVQPTRFELVINLRIAKTLGLTAPP
                     ALLAQAEEVIE"
BASE COUNT          381 a          749 c          770 g          366 t
ORIGIN      
        1 ctagggtgtc gccgctatcg cactcgtgat tgggcggcca agcagctggc tgcaatgctg
       61 cgtatggaac gaaggaggcg atgatgtcgc ttcgatccat cacggttctc gtagctttga
      121 tcctgttgca gctctgcggc tgcgtcaccg cgagcaagcc gtcagacccg tcggtcaacg
      181 agctggagcg ccgtcacgac gagatgatgc agcgcatggg cggcggcagc ggcggcggta
      241 gcggcatgta acgaaccgcg cgctgcgtca ggccgcgcgg tgcatctctc tgaacagcga
      301 cggcggcatg ccgaagcggc gctcgaaggc ctgaccaagc cgcgccggcg aggagagacc
      361 taccctgctg gcgatggcct tgagcggcag gccttgggcg agcagcgtac gcgccgcctc
      421 gaggcgcagg ctttcgacga aatgcgccgg tgtcttgccg gtggcctcgg tgaacttgcg
      481 gtagaagctg cgctcggaca gcccggcgcg ctgggccagc gccggcacgt cgagcggccg
      541 gtcgagatgg gcctgcatcc agtcgatcag gccgacgaac ggcgcctcgg ccgcggtctg
      601 cgcctgcagg agcggactga actgcgattg gtaacctggc cgccgcgcat aaagcacgaa
      661 gtggcgtgcg atcagattgg cgacggcggc gcccaggtcg gcctcgacca aggccaacgc
      721 catgtcgatg ccggtggtga cgccggcgga ggtccaaacc ttgccgtcga cgacgtagag
      781 cgagtcggcg tcgacttcca gcgcgggaaa atttctggcc agccgatcgc agctcgccca
      841 gtgcgtggcc acgcgcctgc cgtccaaaag cccgaccgct gccagcacaa aggcgccggt
      901 gcataccgag ccgtagcgtt tcgcaccggg cgcagccttg gcgagccagc gccggacatc
      961 ggcgcgcgcc gtcacggtct tgaggccgcg cgagccgccc gcgaccagca atgtgtcggg
     1021 ctggccgccg atccgccggc tgtggagggc gacgcccgag ttcgacacga ccaccccgcc
     1081 gtcgggtgag acaatgcgaa gatcgtagac cggccgaccg cttgcctcat tggccgcgcc
     1141 gaacacggcg gccggtccgg tgacatcgag gagctggcag ccctcgtaag ccaggagggc
     1201 gatgcggtgg agtttggcca ttggcataaa atagactgtt tttgtcattt ctgccaagac
     1261 ctgatctcga tacaaccaca actgtcatcc cgaggccgga ggccgaggga cctttacgga
     1321 tcaggaaagg tccctcgctg cgctcgggat gacagtctta ttgaccgcgg aggaaaaaca
     1381 tggctgagcc cgtccagatc ggcatcctgc tctatcccaa cgtcacccag ctcgacgcca
     1441 ccggtcccgc ccaggtgctg tgccgcgtgc cgggcgccaa gctccacatg atctggaaga
     1501 cctgcgatcc ggtgccgacc gatgccggct tttcgatcgt gccgaccacg agcttcgccg
     1561 attgcccgca actcgacgtt atctgcgtgc caggtggcgg cggccaggtc gagctgatga
     1621 ccgatcccga gacgctcgac ttcctgcgca agcaagccgc cggcgcgcgc tacgtcacgt
     1681 cggtctgcac cggctcgctg gtgctcggcg ccgccgggtt gctgaagggc taccgctcgg
     1741 cctgccactg ggcgtggcgc gacatgctga aggatttcgg cgccatccca gtcgccgagc
     1801 gggtggtgcg cgatcgcaat cgcatctcgg gcggcggcgt caccgccggc atcgacttcg
     1861 gcctcaccgt cgccgccgag ctggcgggcg aagaggtcgc caagtcgatc cagctcgtgc
     1921 tcgaatacga cccgcagcca cccttcgact cgggctcgcc tgagaaggcc gggcctgagc
     1981 gcgtcaagcg cttgcgcgag cgcctggcgc cgttgctgaa gacgcgcgcc aaggccaacg
     2041 ccgaggcagc ggcgcgcctg cactaggctt tttttgttcg gccgtcgtgg ccgcttcgtc
     2101 actcgatcac ctcttcggct tgggcaagaa gcgcgggcgg cgcggtgagg ccaagcgtct
     2161 tggcgatcct gaggttgatc acaagctcaa atcgggtggg ctgaacgacc gggagttccc
     2221 cggggtcttc cccattcagc actcgaccgg actgaacacc gagctg
//
LOCUS       DASWGA010000450         3432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1193670, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000450 DASWGA010000000
VERSION     DASWGA010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3432
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1193670"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..785
                     /locus_tag="VF991_10770"
     CDS             <1..785
                     /locus_tag="VF991_10770"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEX9556970.1"
                     /translation="ARGLADGDIAEVTSAWGRAVLRVHITDGLRPGDVFVPMHWTAQL
                     SRAGAINAVVNPAVDPISGQPELKHTPVEIRRVPVLWHGTILARRPVMLPEVSYWARI
                     RGAGYHAYMLAGEQPLETARQVLSAALRATNPGPWLGGVDGIGAVISDGRLEAVMALG
                     ETRDEAMRDRLAPYMAPGRLTVEERNRLLQGGDAGDGVGWRGGEICACFGVSCAAVTT
                     AIADGAASLDAVGTVTRAGTNCGSCRPEIRALLRAARPKRAA"
     gene            785..1840
                     /gene="cysG"
                     /locus_tag="VF991_10775"
     CDS             785..1840
                     /gene="cysG"
                     /locus_tag="VF991_10775"
                     /EC_number="1.3.1.76"
                     /EC_number="2.1.1.107"
                     /EC_number="4.99.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF007922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0043115 - precorrin-2 dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0051266 - sirohydrochlorin ferrochelatase
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase CysG"
                     /protein_id="HEX9556971.1"
                     /translation="MQSFPLFLTLQDRHVLVVGGTEAAARKAELLLSAGARVTLIADT
                     VVGEIAQLIAEGFLSWAGRGFDDTDLAGMSLVIVATDDEALQARVSLAAQRRCLPVNV
                     VDRPRLSSFIMPSIVDRAPITIAISTGGAAPALARRLRAEIERAMPAALGRMARFAEI
                     FREQVRRTLAEPRARRRFWDRVFAGRIGEMALAGDEIGARRELIRLLDSARNEVAPAV
                     GMVHLVGAGPGDPDLLTLKAHRLLQRADVVVYDRLVSPEVLAMARRDAERIQVGKHRG
                     HHSMPQAEINDCLVSLARAGKSVVRLKGGDPFVFGCGGEEVEVLMQAGIAVEVVPGVT
                     HSPAATMPRPASSSPGI"
     gene            1884..2174
                     /locus_tag="VF991_10780"
     CDS             1884..2174
                     /locus_tag="VF991_10780"
                     /inference="COORDINATES: protein motif:HMM:NF012799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556972.1"
                     /translation="MLARPRQTVVIYMGTETLSLIANQLIEHGLPASTPIRLIENGTT
                     SREQRAVGTLASIERQALQANMIGPTLCVVGEVGGLALSGDPEFRFVSGISL"
     gene            2215..2961
                     /locus_tag="VF991_10785"
     CDS             2215..2961
                     /locus_tag="VF991_10785"
                     /inference="COORDINATES: protein motif:HMM:NF017736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HEX9556973.1"
                     /translation="MRSFVLSFAATLAFAGAGFAQTSHTGSNIPEVLRGTSGESTTKK
                     TPPAKPAVHKVAAAQSTQHTTAQRATPQRVTPQSLRAARYGGFAPAPVPPPPELDTTS
                     PRTLSLVNANSGETLAVTFWSNGAYRRDALDKLNHFLRDTRENAQTEMDPLLFDVLWH
                     TAMVVGYGGAIEVLSAFRSPTTNAWLASVSRGVASDSQHMNGNAMDVRFPGVPVFKIR
                     QAAGSLNMGGVGFYPRSGFVHLDTGPVRYW"
     gene            2979..>3432
                     /locus_tag="VF991_10790"
     CDS             2979..>3432
                     /locus_tag="VF991_10790"
                     /EC_number="3.1.1.106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HEX9556974.1"
                     /translation="MARIEVVEGDITRLDVDAIVNAANESLLGGGGVDGAIHRAAGPD
                     LLAECRTLGGCPTGEAKITKGYRLKARHVIHTVGPVWRGGTSGESELLARCYRNSLVL
                     TEQHGLSSIAFPAISTGVYGYPKQAATEIAVREVRAHEGGLERVIFCCF"
BASE COUNT          521 a         1168 c         1176 g          567 t
ORIGIN      
        1 gcgcgcgcgg gttggctgac ggcgacatcg ccgaagtcac cagtgcttgg ggccgcgccg
       61 tgctgcgtgt gcatattacg gatgggttac ggccgggcga cgttttcgtg cccatgcatt
      121 ggacggcgca gctgtcgcgc gccggcgcca tcaacgctgt tgtcaatccc gcggtcgacc
      181 cgatctccgg ccagcccgag ctcaagcaca cgcccgtcga aattcgccgt gtgcccgtcc
      241 tgtggcatgg cacgattctc gctcggcgac cggtgatgct gcctgaagtt tcgtattggg
      301 cgcggatcag gggcgccggc taccacgcct acatgctcgc gggcgagcag ccactcgaaa
      361 cagcgcgaca ggtgctgtcg gcggcgctgc gtgccaccaa tcctgggccc tggctgggcg
      421 gcgtcgacgg aatcggcgcg gtcatcagcg acggccggct cgaggcggtc atggcgcttg
      481 gcgaaacccg cgacgaggcg atgcgtgatc gcctggcgcc gtacatggcg cctggccggc
      541 tgaccgtcga ggaacgcaac cggctgctcc aaggcggcga tgccggagat ggcgtggggt
      601 ggcgtggcgg cgagatctgc gcctgtttcg gcgtgtcgtg cgcggcggtg acgacggcca
      661 tcgccgatgg cgcggcaagc ctcgacgccg tcggcaccgt cacgcgcgcc ggcaccaatt
      721 gcggctcctg ccgtcccgag atccgcgccc tcctgcgcgc cgcgcggccg aagagggcgg
      781 cgtgatgcaa agcttcccgc tcttcctcac cttgcaggat cgccacgtcc tggtcgtcgg
      841 cggaaccgaa gcggccgcgc gcaaggcgga gctgctgctg tcggccggcg cgcgggtgac
      901 cttgatcgcc gacacggtgg tgggcgagat cgcccagctg atcgccgagg ggttcctttc
      961 gtgggccggc cgcggcttcg acgatacaga tcttgccggc atgtcgctgg tcatcgtcgc
     1021 caccgacgac gaggcgctgc aggcgcgcgt gtcgctcgcc gcccagcgcc gctgcctgcc
     1081 ggtgaacgtc gtcgatcggc cgaggctgtc gagcttcatc atgccctcga tcgtcgatcg
     1141 cgcgccgatc accattgcga tctcgaccgg cggtgcggcg ccggcgctgg cccgccggct
     1201 gcgcgccgag atcgagcggg cgatgccggc ggcgctcggc cgcatggcgc ggttcgccga
     1261 gatcttccgc gagcaggtgc gccggacgct tgccgagcca cgcgcgcgcc gtcgcttctg
     1321 ggatcgcgtg tttgcaggcc gcatcggcga gatggcgctg gccggcgatg agatcggcgc
     1381 gcggcgcgag ctgatccgcc tgctcgattc agcccgcaac gaagtggccc ccgcggtcgg
     1441 catggtccat ctcgtcggcg ccggtccggg cgaccccgac ttgctgaccc tgaaggccca
     1501 tcgtctgctg cagcgcgccg acgttgtggt ctacgaccgc ctcgtctcgc ccgaggtgct
     1561 ggccatggcg cggcgcgacg ccgagcgcat ccaagtcggc aagcaccgcg gccatcactc
     1621 aatgccgcag gcggagatca acgactgcct ggtgagcctg gcgcgcgccg gcaagagcgt
     1681 ggtgcggctg aagggcggcg atcccttcgt gttcgggtgt ggcggcgagg aggtcgaagt
     1741 cctgatgcag gccggcatcg ccgtcgaggt cgtgcccggc gtgacccact cacccgccgc
     1801 gaccatgccc aggcctgcgt cttcgtcacc gggcatctga aggatggtgc cctcaaggac
     1861 ggcaaactgg cgctcgactg ccgatgctgg cgcggccgcg ccagaccgtc gttatttaca
     1921 tgggcacgga aactttgtcg ctgatcgcca accaattgat cgagcacggc cttccagcct
     1981 cgaccccgat tcgcctgatc gaaaatggca ccaccagccg cgagcagcgg gcggtgggca
     2041 cgctggcctc catcgagcgt caagccttac aggccaacat gatagggccg actctttgcg
     2101 tggtaggcga ggtcggcggc ctagccctct cgggggaccc agaatttcgc tttgtgtcag
     2161 gaattagtct ctgatatgag tcctgtggca taaatacaac aaagccgggg cgacatgcgc
     2221 agttttgtgt tgagctttgc agccacgctg gcttttgccg gcgcgggctt tgcccagacc
     2281 agccataccg gatcgaatat tcccgaggtt ctgcgcggca ccagcggcga atccaccacc
     2341 aagaagacgc cgccggccaa gccggcggtc cataaggtgg ccgctgccca atcgacgcag
     2401 cacaccaccg cgcagcgcgc gacgccgcag cgcgtcacgc cgcaaagctt gcgggccgcc
     2461 cgctatggcg gttttgcgcc ggccccagtg ccgccgccgc cggagctcga tacgaccagc
     2521 ccgcgcacgc tcagcctggt gaacgccaac tccggcgaga cgctcgcggt gaccttctgg
     2581 tccaacggcg cctatcgccg tgacgcactc gacaagctca accacttcct gcgcgacacg
     2641 cgggagaacg cgcagacgga gatggatccg ctgctgttcg acgtgctgtg gcacacggcg
     2701 atggtcgtgg gctatggcgg cgccatcgaa gtcctgtcgg ccttccgctc gccgaccacc
     2761 aacgcctggc tcgccagcgt cagccgtggc gtcgcctccg acagccagca catgaacggc
     2821 aacgccatgg atgtccgttt cccgggcgtg ccggtgttca agatccgcca agcggcgggg
     2881 tcgctcaaca tgggcggcgt cggcttctac ccgcgctcgg gcttcgtcca tctcgacacc
     2941 ggacccgttc gctactggta gcccatcggg gagctgatgt ggcgcgcatc gaggtcgtcg
     3001 agggtgacat cacgcgcctc gacgtcgatg cgatcgtgaa cgccgccaat gaaagccttt
     3061 taggcggtgg cggcgtcgac ggcgccattc atcgcgcggc cggcccggac cttttggccg
     3121 aatgccgcac gctgggcggc tgtccgaccg gcgaggcgaa aatcaccaag ggctaccggc
     3181 tgaaggcgcg ccacgtcatc catacggtcg gtccggtatg gcgcggcggc acatccggcg
     3241 aatccgagct gctggcgcgc tgctatcgca acagcctggt gctgactgaa cagcacggtc
     3301 tttcaagcat cgccttcccg gcgatctcga ccggcgtgta cggctatccg aagcaggctg
     3361 cgacggaaat cgcggtgcgc gaagtgaggg cgcacgaggg cggcctcgag cgagtcatct
     3421 tctgctgttt cg
//
LOCUS       DASWGA010000451         3321 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1573794, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000451 DASWGA010000000
VERSION     DASWGA010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3321
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1573794"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..744
                     /locus_tag="VF991_10795"
     CDS             <1..744
                     /locus_tag="VF991_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEX9556975.1"
                     /translation="ILVANPNTSTGVTNRLLAAGKLVASPGTELLPMTAPHGVPYIAT
                     RAEAAIGAAAALEMLAERRGGIDAAIIAAFGDPGLGGARELFDFPVVGMAEAAMLAAC
                     MLGRSFAIVSFAKALEPWFAEIVAWHGLSARCAAIRTLDEVFRSIDDVQDEKQQVLID
                     LANNTVRNDAADVVILAGAPLAGMADKVKDRIPVPVVDGIQAAVTMAEGLVRLKPRKA
                     IAGTYRRPAAKDSKGLSAALADVIGHRDP"
     gene            734..1621
                     /locus_tag="VF991_10800"
     CDS             734..1621
                     /locus_tag="VF991_10800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9556976.1"
                     /translation="MTRDLKGYGRTPPDAKWPGGARVAVSFVINFEEGAELSLSAGDA
                     SNEKVYEVTDEVTGVPDRCMESHFEYGTKAAWWRIADVLERLGVPATVSACGKAAELS
                     PWLIEDAVKRGHEIACHGWRWEKHAYMAEADERQAIARAVMVLTQIAGSRPVGWHTRS
                     TPSPNTRRLLVENGFLYDSDDYSDDLPFFIDVSGKQHLVLPYSFDTNDMHYHQGFHRF
                     VTARDFADYTTDAFDTLWTEGERTPKMMSIGLHLRMIGRPGRIAALDRIVKHMNLKGG
                     AWFATRRQIAEHWLGRFGV"
     gene            complement(1688..2164)
                     /locus_tag="VF991_10805"
     CDS             complement(1688..2164)
                     /locus_tag="VF991_10805"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9556977.1"
                     /translation="MNSTHPDFVGVDVASLSDAEALGHLKANAAEPTRLLNGEILELD
                     SERGTCRYRFEIVPAFCHSQGKICQGGFLTGMIDVAMANAAMARSKFACAVPTLEMKM
                     SFLEAAGPGSVIAEGRVLRWGGSVGFLDGDIKDDKGRLIVHATSTVKIVRPRPRSS"
     gene            complement(2175..2651)
                     /locus_tag="VF991_10810"
     CDS             complement(2175..2651)
                     /locus_tag="VF991_10810"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX9556978.1"
                     /translation="MGRPPAKAPARSLDRGLLPSLLGYMLRRTQSAVFGDFAATFAKA
                     GEALTPGEFGLLVLVERNSGLSQMALARALGIDRSTLVPILDRLQARGFLMRHRSPTD
                     GRTHALALTPAGEKALARFARLVRAHEKRIAAGLSSAETRILIELLEKVHSGARSL"
     gene            2709..>3321
                     /locus_tag="VF991_10815"
     CDS             2709..>3321
                     /locus_tag="VF991_10815"
                     /inference="COORDINATES: protein motif:HMM:NF013161.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX9556979.1"
                     /translation="MSFKVRIAQADRTIDVPTGATILATALDAGISYPFGCQSGNCGA
                     CKSHLVKGEVTMEGYSEFALSDEEKARGLILACRAVPWQDSEVAWLDEDDLVVHPRRL
                     LDCRVVGLADATHDIKRIRLEIASGGPFDFSAGQFASVTFEGCPPRDYSMANVPGDPV
                     LEFHVRRTAGGATSTHVAEKLKLGDSVRVEGPFGPSYLREGHRG"
BASE COUNT          543 a         1136 c         1116 g          526 t
ORIGIN      
        1 atcctggtcg ccaatcccaa cacctccacc ggcgtcacta accgcctgct cgccgccggc
       61 aagcttgtag caagtcccgg caccgagctg ctgccgatga cagcgccgca cggcgtgccc
      121 tacatcgcca cccgagccga ggccgcgatc ggcgcggcgg cggcgctcga gatgctggcg
      181 gaacggcgcg gcgggatcga tgccgccatt atcgccgcct tcggcgatcc gggcttgggc
      241 ggcgcgcgcg agctgttcga ctttcccgtg gtcggcatgg ccgaggcggc gatgctcgcg
      301 gcctgcatgc tcggccgctc cttcgctatc gtgagcttcg ccaaggcgct cgagccgtgg
      361 ttcgccgaga tcgtggcgtg gcatgggctc tccgcccgtt gcgcggccat ccgcactctc
      421 gacgaggtct tccgctcgat cgacgacgtg caggatgaga agcagcaggt gctgatcgat
      481 ctcgccaaca acacggtcag gaacgatgcc gccgacgtcg tcatcctggc cggcgcgccg
      541 cttgccggca tggccgacaa ggtcaaggac cgcattcccg tgccggtggt cgacggcatc
      601 caggcggcgg tcacgatggc cgaaggcctg gtccgcctga agccgcgcaa ggccatcgcc
      661 ggcacctatc gtcggccggc ggccaaggac tccaagggcc tttcggccgc cctcgccgac
      721 gtgatcggcc atcgtgaccc gtgacctgaa aggctacggg cggaccccgc ccgatgcgaa
      781 atggccgggc ggcgcgcggg tcgccgtgtc gttcgtcatc aatttcgagg aaggcgcgga
      841 gctgtcgctg tccgcgggcg atgcctcgaa cgagaaggtc tacgaggtca ccgacgaggt
      901 gacgggcgtg cccgaccgct gcatggaatc gcacttcgag tatggcacca aggcggcgtg
      961 gtggcggatc gccgatgtat tggagcggct cggcgtgcct gcgaccgtca gcgcctgcgg
     1021 caaggcggcc gagctctcgc cctggctgat cgaggacgcg gtgaagcgcg gccacgagat
     1081 cgcctgccac ggctggcgct gggaaaagca cgcctatatg gcggaagcgg acgagcgcca
     1141 ggcaatcgcc cgggccgtga tggtgttgac ccaaatcgcc ggcagccgtc cggtcggttg
     1201 gcacacccgc tcgacgccct cgcccaacac gcgccgcctg ctggtcgaga acggctttct
     1261 ctacgacagc gacgactact cggacgacct gccgttcttc atcgacgtct caggcaaaca
     1321 gcacctggtg ctgccctaca gcttcgacac caacgacatg cactaccacc agggcttcca
     1381 ccgcttcgtg acggcgcgcg acttcgccga ctacacgacc gacgccttcg acacgctgtg
     1441 gaccgaaggc gaacggacgc ccaagatgat gtcgatcggc ctgcacctgc gcatgatcgg
     1501 ccggcccggc cgcatcgctg ccctcgaccg catcgtgaag cacatgaacc tgaagggcgg
     1561 cgcctggttc gccacccgcc gccagatcgc cgagcattgg cttggtcggt tcggggtttg
     1621 atgtcgtcct gagcgcagcg aaggacctca ccgccgcttg ccacgggcat gagatccttc
     1681 gctgcgctca ggatgaccga gggcgcggcc tcacaatctt cacggtcgag gtggcgtgca
     1741 cgatcagccg ccccttgtcg tccttgatgt cgccatcgag gaaaccgacc gaaccgcccc
     1801 agcgcagcac gcggccctcg gcgatcacgc ttcccggtcc ggccgcctcg aggaagctca
     1861 tcttcatctc gagtgtcggc acggcgcagg cgaacttgct cctggccatg gcggcgttgg
     1921 ccatggcgac gtcgatcatg ccggttaaaa agccgccctg gcagatcttg ccctgggagt
     1981 ggcagaaggc cggcacgatc tcgaagcggt agcgacacgt gccgcgttct gaatcgagct
     2041 cgaggatctc gccgttcaac aggcgcgtcg gctcggcggc gttggccttg aggtggccga
     2101 gcgcctcggc gtcgctcagc gaagcgacgt cgacgccgac gaaatccgga tgggtcgagt
     2161 tcatggcgcg cggactatag cgaacgggcg ccgctatgca ccttctccag gagctcgatc
     2221 aggatgcggg tttcggccga tgaaagtccc gccgcgatgc gcttttcgtg cgcgcgcacc
     2281 agacgggcga agcgcgccag cgccttctcg ccggccggcg tcagcgccag cgcatgggtg
     2341 cgcccgtcgg tcggcgagcg gtggcgcatc aggaacccgc gcgcctgcag gcgatcgagg
     2401 atcggcacca gggtcgagcg gtcgatgccg agcgcgcgcg ccagcgccat ctggctcagg
     2461 ccggaattgc gctcgaccag gaccagcagg ccgaactcgc cgggcgtcag ggcctcgcct
     2521 gccttggcga acgtggcggc gaaatcgccg aataccgccg actgggtgcg gcggagcatg
     2581 tagcccagca gcgacggcag caggccccga tcgaggctgc gggctggcgc tttggcgggt
     2641 ggacggccca tgacgggagt ggtaaacgga gattgtttgg ggatcaaaca aattctctca
     2701 cgtacccaat gagcttcaaa gtccgtatcg cccaagccga ccgcaccatc gacgtcccga
     2761 ccggcgccac cattttagca acggcgctcg atgcgggaat ctcctatccg ttcggctgcc
     2821 agtcgggcaa ttgcggggcc tgcaagtcgc acctcgtgaa gggcgaggtg acgatggagg
     2881 gctattcgga attcgccctg tcagacgagg aaaaggcgcg cggcctgatc ctcgcctgcc
     2941 gcgccgtgcc gtggcaagac agcgaggtcg cctggctgga cgaggacgac ctggtcgtcc
     3001 atccccgccg cctgctcgac tgccgcgtgg tcgggctcgc ggacgccacg cacgacatca
     3061 agcgcattcg tctcgagatc gcgtcgggcg ggccgttcga cttttccgcc ggccagttcg
     3121 cctcagtcac tttcgagggc tgtccgccgc gcgactattc gatggccaac gtgcccggcg
     3181 acccggtgct cgaattccac gtgcgccgca ccgcgggcgg cgccaccagc acgcatgtcg
     3241 ccgagaagct caaactcggc gatagcgtcc gggtcgaagg gccgttcggc ccgtcctacc
     3301 tgcgcgaggg ccatcgcggg c
//
LOCUS       DASWGA010000452         4103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1193793, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000452 DASWGA010000000
VERSION     DASWGA010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4103
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1193793"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..818
                     /locus_tag="VF991_10820"
     CDS             <1..818
                     /locus_tag="VF991_10820"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX9556980.1"
                     /translation="VGFLIAGPLAGHVVAGSSGRQGGAGIAALGIAPETAARLARRAA
                     GFPTVTMTIETAEGPAETETLLYDYPGKSDEWVVLSAHVDGHDLAESAMDNGTGLASV
                     LAVTRALAPQVAGFRRGLRVMFFSVEEWALTGSAQYVEQLSAAERDKIALNVNLDSVA
                     GSSSLAALTSGYAGVEPFVLGVAEANGVSVRTVRPLMTNSDHANFAQAGIPALRLVAG
                     FDDPAAHLRLVLTAADTRDKVGQGELRGATLFTAALVAAACNAEPAEVAKWRK"
     gene            complement(908..2047)
                     /locus_tag="VF991_10825"
     CDS             complement(908..2047)
                     /locus_tag="VF991_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9556981.1"
                     /translation="METLASSVLPEGVRSRILGAINGLDIHVLEAGFEPKGRPSVLLL
                     HGFPELAYSWRKVLPALAGAGYHAIAPDQRGYGRTTGWAADYDGDLANFRFMNLLRDS
                     IGVLLALGHRTAEAVVGHDFGATVAAYAALVRPDIFKRLVLMSAPFGGPPGVPFDTAG
                     KPPAAKAADIHAALAALARPRKHYQWYYSTRPANADMWKARQGVHDFLRAYYHHKSAD
                     WKANKPFELKGWIADELAKMPTYYIMDLADGMAETVAKEMPSAAEIAANAWLTERELK
                     VYSDEFTRTGFQGGLNWYRVRTGGQAAGELEVFAGRTIDVPATFISGKSDWGIYQTPG
                     AIKKMQNTACTNMKEIHLIDGAGHWVQQEKADEVSRLLVQFLKSA"
     gene            complement(2169..2552)
                     /locus_tag="VF991_10830"
     CDS             complement(2169..2552)
                     /locus_tag="VF991_10830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556982.1"
                     /translation="MTRPQLLVIATAGILGSLAVATTTFHQPANAQAIQARVFAERAC
                     LDYGIAPSTAAHESCVARAARAFDRGEPDIAYMQARATRDAREACLTYGVQPETLGYQ
                     QCVATQVERRTTPTMLIRYVPRPIE"
     gene            complement(2634..3020)
                     /locus_tag="VF991_10835"
     CDS             complement(2634..3020)
                     /locus_tag="VF991_10835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556983.1"
                     /translation="MTNSQMHAAIALGSALIVGAFVAFLPPVPPASAQSHGQRICREQ
                     GVKPGTEAYEYCLSQATRALEWGEPQMAYGFAQVAAESRDACLSYGLHERTAGLQACV
                     DKETTARALMIYANEEPKYGPQIADH"
     gene            3170..>4103
                     /locus_tag="VF991_10840"
     CDS             3170..>4103
                     /locus_tag="VF991_10840"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEX9556984.1"
                     /translation="MGHTEIFWRWLRARVRRYRVELALTLRMTVAAVVGLGLAQALDL
                     PLPLWTVLTALIVTQLSVGRSLKTSVDYLVGTVGGTIYGAALALLIPHNSEAALLIVL
                     VLAVAPLALLAALKRNLNAVPVSSIIVVLMPAIAHAGPLESAINRVLEVGLGVVVGLA
                     VAFLVLPAGGHRLARQEAARTLDLLAQALGRVLAGRLGAADVEALRRLYDRIGQSLTE
                     FTANAAEGERERTARLSAEPDTQPLRRTLLRLRHDVVTVGRIVRGDPLPEPIQGRLAP
                     RLAAIGHAGSDYLRASGLALAARRRPPPGNDLEQA"
BASE COUNT          595 a         1380 c         1432 g          696 t
ORIGIN      
        1 ccgtcggttt cctgatcgcg gggccgcttg ccggccacgt cgtggcgggc tcgtccggcc
       61 gccaaggcgg cgctgggatt gccgcgctcg gcatcgcgcc tgagacggcg gcacggctgg
      121 cccgccgcgc ggcaggtttt ccgaccgtca ccatgaccat cgagacggcg gagggaccgg
      181 ccgagaccga gacgctgctc tacgactatc ccggcaagag cgacgagtgg gtggtgctga
      241 gcgcccatgt cgacggccac gatctggccg aaagcgccat ggataacggc accggccttg
      301 cctcggtgct cgccgtcacg cgcgcgctgg caccgcaggt cgcgggcttt cgccgcggct
      361 tgcgcgtgat gttcttcagc gtcgaggaat gggcgctcac cggctcggcg caatatgtcg
      421 agcagctcag cgccgccgag cgcgacaaga tcgcgctcaa cgtcaatctc gactcggtgg
      481 cgggcagctc gagcctcgcg gcgctgacca gcggctatgc cggggtcgag cccttcgtgc
      541 tcggcgtggc ggaggcgaac ggcgtaagcg tgcgcacggt ccggccgctg atgaccaatt
      601 ccgaccacgc caacttcgcc caggccggca tcccggcgct gcgcctggtt gcgggcttcg
      661 acgatcctgc ggcgcatttg cgcctggtgc tcacggcggc cgacacgcgc gacaaggtcg
      721 ggcagggcga attgcgcggc gccacgctgt tcaccgccgc gctggtcgcc gccgcctgca
      781 atgccgagcc ggcggaggtg gcgaagtggc gaaagtagac gccgctgtca tcccgagcgc
      841 agcgagggac ctttactcta gcctcaaagg tccctcagcc tgcggcctcg ggatgacatc
      901 cgtccgttta agccgacttc aagaactgca ccagcagtcg gctcacctcg tccgccttct
      961 cctgctgcac ccagtggccg gcgccgtcga tgaggtggat ctccttcatg ttggtgcagg
     1021 cggtgttctg catcttcttg atggcgccgg gcgtctggta gatgccccag tcgctcttgc
     1081 cggagatgaa ggtcgcgggc acgtcgatgg tgcgaccggc gaagacttcc agctcgccgg
     1141 ccgcctggcc gcccgtgcgc acgcgatacc agttgagccc gccctggaag ccggtgcgcg
     1201 tgaactcgtc gctatagacc ttgagctcgc gctcggtcag ccaggcgttg gccgcgatct
     1261 ccgccgccga gggcatctcc ttggccaccg tctcggccat gccgtcggcc agatccatga
     1321 tgtagtaggt cggcatcttg gcgagctcgt cggcgatcca gcctttcagc tcgaacggct
     1381 tattggcttt ccagtccgcg ctcttgtggt ggtagtaggc gcgcaggaaa tcgtgcacgc
     1441 cctgccgcgc cttccacatg tcggcgttgg cgggccgcgt cgagtagtac cactggtaat
     1501 gcttgcgcgg ccgtgccagc gcggcgagag cggcatggat gtcggcggcc ttggcggccg
     1561 gcggcttgcc cgcagtatcg aacggcacgc ccggcggtcc accaaacggt gcgctcatga
     1621 gcaccaggcg cttgaaaatg tcgggccgaa ccaaagcggc ataggcggcg accgtggcgc
     1681 cgaaatcgtg accgacaacg gcctctgccg tgcgatggcc gagggccaac agcacgccga
     1741 tggaatcgcg cagcagattc atgaatcgga aattcgcgag atcaccgtca tagtcggcgg
     1801 cccagccagt ggtgcggcca tagccgcgct ggtcgggtgc gatcgcgtga tagcccgcgc
     1861 ccgccagcgc cggcaggacc ttgcgccagc tgtaggcgag ctcgggaaaa ccgtgcagca
     1921 gcagcacgct tggccgccct ttgggctcga agccggcctc gagcacgtga atgtcgagac
     1981 cgttgatggc gccgaggatg cgcgaacgta cgccctcggg caggacggag gaggcaagcg
     2041 tttccatgac cgcgagccta cgctgcctgt ctcgaaaaag gcaggctggt cagcccgctg
     2101 ctttgcgaac gaaaactggc cgggcgtggg cgcccgacca gtcctcaccg cgttcgtgct
     2161 gcgtcgccct attcgatcgg ccgcggcacg tagcggatga gcatcgtcgg cgtggtgcgc
     2221 cgctcgacct gggtggccac gcactgctgg tagcccagcg tttccggctg cacgccgtag
     2281 gtcaggcaag cctcgcgcgc gtcgcgtgtc gcgcgggcct gcatgtaggc gatatcgggc
     2341 tcgccacggt cgaacgcgcg cgcggcgcgg gcgacacagc tttcgtgggc ggccgtgctc
     2401 ggcgcaatgc cgtagtcgag gcacgcacgt tcggcaaaga cccgcgcttg aatggcctgg
     2461 gcattggcag gctgatggaa cgtggtcgtg gcgaccgcca agctgccgag gatgccggcc
     2521 gttgcgatca caagcagctg cgggcgggtc atggacgatc agatcctttc ggaaatcgcc
     2581 tgtgaaacgc acgcccccgc cgccgattgc ggcgctggga gagcgcgacg ccgttaatgg
     2641 tcggcgattt gcggtccgta tttcggttct tcgttggcgt agatcatcag cgcgcgagcc
     2701 gtggtctcct tgtcgacaca ggcctggaga ccggccgtcc gctcatgcag gccgtacgac
     2761 aggcaggcgt cgcgcgactc ggccgccact tgggcgaagc cataggccat ctgaggctcg
     2821 ccccattcca gggcgcgtgt ggcctgcgac agacagtatt cataggcttc cgtgcctggt
     2881 tttacgcctt gctcgcggca aatgcgctgg ccgtggcttt gcgccgaggc cggcggtacc
     2941 ggcggcagga aggcgacgaa agcgccgacg atgagcgcgc tgccgagcgc gattgcggcg
     3001 tgcatctggc tgttggtcat gggaccctcc aggtctccga ataggcttgc gtcgataaaa
     3061 cgtccgttac cggaccgaag ttgccgaaaa tccaccaccc cgtggccttt tcgcccgcca
     3121 cccgccgtgc ttccctgcgg tggggcgatt tccttagagg ctgccgggcg tgggccacac
     3181 cgagatcttc tggcgatggc tgcgcgcccg ggtccgcagg taccgggttg aacttgcact
     3241 aaccctgcgc atgacggtgg cggcggtggt cggactgggc ctcgcccagg cgctcgatct
     3301 gccgttgccc ctgtggacgg tgctcactgc cctgatcgtg acgcaattga gcgtcggccg
     3361 ctcgctcaag acctcggtcg actatctggt cggcacggtg ggcggcacga tctacggcgc
     3421 ggcgctggcg ctgctgatcc cgcacaatag cgaagcggcc ctgctgatcg tgctggtgct
     3481 cgcggtggcg ccgctcgccc tgctggcggc gctgaagcgc aatctcaatg ccgtgccggt
     3541 gtcgtcgatc atcgtcgtgc tgatgccggc catcgcccat gcgggcccgc tcgagtcggc
     3601 gatcaaccgc gtgctcgaag tcgggctcgg cgtggtggtg ggcttggcgg tggccttcct
     3661 ggtgctgccc gccggcggcc accgcctggc gcggcaggag gcggcgcgca ccctcgatct
     3721 tctagcccag gcgctcggcc gcgtgctggc cggtcggctc ggcgccgccg atgtcgaggc
     3781 cttgcgccgc ctctacgacc ggatcggcca gtcgctcacc gagttcaccg ccaatgccgc
     3841 cgaaggcgag cgcgagcgca cggcgcggct gtcggccgag cccgacaccc agccgctgcg
     3901 ccgcacgctg ctgcggctgc gccacgacgt ggtcacggtc ggccggatcg tgcgcggcga
     3961 tccgttgccc gagccgatcc agggacggct ggcgccgcga cttgccgcca tcggtcacgc
     4021 cggcagcgac tatttgcggg caagcggcct tgccctggcg gcgcgccggc ggccgccgcc
     4081 gggaaacgat ctcgagcagg cct
//
LOCUS       DASWGA010000453         3057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2191779, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000453 DASWGA010000000
VERSION     DASWGA010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2191779"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..1455)
                     /gene="lysA"
                     /locus_tag="VF991_10845"
     CDS             complement(178..1455)
                     /gene="lysA"
                     /locus_tag="VF991_10845"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008874061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEX9556985.1"
                     /translation="MSSFAYSNGEMHAEGVALSAIAAQVGTPFYCYSAGALRAAWREF
                     ADGIKGMNAGVCYAMKANSNLAVVRLFGELGAGADIVSVGEMRRALAAGIPARRIVYS
                     GVGKKASELMAALQAGVGQINVESSAELETLNAVAAQLGVRADITIRVNPDVDAGTHA
                     KITTGRKENKFGVDIDLAREAFALAARLPNLRVVGVAMHIGSQLTSLDPYRSAIVRVR
                     ALIGELRADGHRVDRFDIGGGLGIVYADERPPSIADFMAMVAKETSGLGCELTFEPGR
                     RLVGEAGVLVSEVILVKPGVSKTFVIVDAAMNDLIRPTLYEAWHDILPVRERQDKATI
                     RCDIVGPICESGDYLAQDRDLAPLAAGDLVMVRSAGAYGAVMASTYNGRPLVPEVMVD
                     GTRFAVTRARPTIEEMLSAERFPPWMEPVKPKS"
     gene            complement(1452..2894)
                     /gene="argH"
                     /locus_tag="VF991_10850"
     CDS             complement(1452..2894)
                     /gene="argH"
                     /locus_tag="VF991_10850"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEX9556986.1"
                     /translation="MARKNTTARAPKSPSNTMWGGRYKLGPAEIMEKINASIGFDRRL
                     YAQDIAGSLAHCDMLVAQGILTAKDGRAIKRGLAKVREEIESGRFKFSTKLEDIHFNV
                     EARLTALIGPAGGRLHTARSRNDQIALDVRLWVRDTIDRLEPMLRDLQAALIDRAEEY
                     AATIMPGFTHLQTAQPITFGHHLLAYVEMVGRNRSRLADCRARLNESPLGAAALAGSP
                     HPIDPRRTAKALGFAGPMANSLDAVSDRDYVVEFIAAASLTAVHLSRLAEEIVIWCSA
                     PFRFIALSDAFTTGSSIMPQKRNPDAAELVRAKVGRIVGAFVALCTILKGLPLTYGKD
                     MQEDKEPLFDAADSLELGVAAMTGMVRDLQANPQRMRAVAAADYSVATDLADWLVRKA
                     GLPFRQAHHVTGRLVAIAADKGIDLDKLSLKEMQAVEPKIDRGVYRVLTVEASVNARK
                     SFGGTSPINVARSVGEARRRFVGRAKGQGR"
BASE COUNT          505 a         1040 c         1019 g          493 t
ORIGIN      
        1 ccggcaaaga gatcgagatg ggcggcggcg atgaacagcg ccacgaacgc cgccggcggc
       61 accaggcggg gccacaggcc ttcccacgcc aacgccgccc acgccaaacc gatcttgcgg
      121 cccaatccgg gcgccgggat catggtggtc tggctggcgt ccatcgcctt cctttcgcta
      181 actcttcggc tttaccggct ccatccaagg cggaaagcgc tcggcggaga gcatctcctc
      241 gatcgtcggc ctggctcggg tgaccgcaaa tcgcgtgcca tcgaccatca cttccggcac
      301 cagggggcga ccgttgtaag tcgaagccat gaccgccccg taggcacccg ccgagcgtac
      361 catgacgagg tctccggcgg ccagcggggc cagatcacgg tcctgtgcca gatagtcgcc
      421 cgattcgcag atcggcccaa caatgtcaca gcggatcgtg gccttatctt ggcgttcccg
      481 aaccggcaaa atatcgtgcc acgcctcgta caaggtcggc cggatgagat cgttcatggc
      541 ggcgtcgaca atcacgaagg tcttcgatac gccgggcttc accaggatca cctcgctcac
      601 cagcacaccg gcctcgccga ccaggcgccg gcccggctcg aaggtcaact cacaacccag
      661 gcccgaggtt tccttggcca ccatcgccat gaagtcggcg atcgagggcg gccgctcgtc
      721 ggcataaaca atccccagcc caccgccgat gtcgaagcga tcgaccctgt ggccgtcggc
      781 acgcagctcg ccgatcagcg cgcgcacgcg gacgatggcg ctgcggtagg ggtccagcga
      841 ggtgagctgc gagccgatgt gcatcgccac cccgaccacc cggagattgg gcaagcgggc
      901 ggccagcgcg aaggcctcgc gcgcaaggtc gatgtcgacg ccgaacttgt tctccttgcg
      961 cccggtggtg atcttggcgt gggtgccggc atcgacgtcg ggattgaccc ggatggtgat
     1021 gtcggccctg acgccgagct gggcggcgac cgcgttcaag gtttcgagct cggccgagct
     1081 ctcgacgttg atctggccga cccccgcctg aagcgcggcc atcagctcgg aggccttctt
     1141 gccgacgccg gaatagacga tgcgcctggc cgggatgccg gccgccagcg cacgccgcat
     1201 ctcgcccacc gagacgatgt cggcgcccgc gcccagctcg ccgaacagcc ggacgaccgc
     1261 caggttgctg ttggccttca tggcgtagca gacaccggcg ttcatgccct tgatgccgtc
     1321 ggcgaactcg cgccacgccg cgcgcaaggc gcccgccgag tagcaataga aaggtgtgcc
     1381 gacctgggcg gcgatggcgc taagcgccac cccttcggca tgcatctcgc cattgctgta
     1441 ggcaaaggag ctcatcgccc ctgtcccttg gcgcgcccca cgaagcggcg gcgggcctcc
     1501 cccacggagc gcgcgacatt gatgggcgag gtgccgccaa aactcttgcg cgcattgacc
     1561 gatgcctcga ccgtcagcac gcgatagacg ccgcgatcga tcttcggctc gaccgcctgc
     1621 atctccttga gcgatagctt gtcgagatcg atgcccttgt cggcggcgat cgccaccagc
     1681 cggccggtga catgatgggc ctggcggaac ggcaggccgg ccttacgcac cagccagtcg
     1741 gcaaggtcgg tggccaccga atagtcggcc gccgccacgg cgcgcatgcg ctgcgggttg
     1801 gcctggaggt cgcgcaccat gccggtcatc gccgccaccc cgagctcgag ggagtcggca
     1861 gcgtcgaaca gcggctcctt gtcctcctgc atgtccttgc cgtaggtgag tggcaggccc
     1921 ttcaggatgg tgcagagcgc cacgaaggcg ccgacgatgc ggccgacctt ggcgcggacg
     1981 agctcggcgg catcgggatt gcgcttctgc ggcatgatcg agctgccggt ggtgaaggca
     2041 tccgacaggg cgatgaagcg aaagggcgcg ctgcaccaga tcacgatctc ttcggccagc
     2101 cgcgacaggt gcaccgccgt gagcgatgcc gcggcgatga attcgacgac atagtcgcgg
     2161 tccgacacgg catcgagcga attggccatc gggccggcga agcccagcgc cttggccgtg
     2221 cggcgcggat cgatgggatg cggcgagccc gccagtgccg cggccccgag cggcgattcg
     2281 ttgagccggg cgcggcaatc ggccaggcgg ctgcggttgc ggccgaccat ctcgacatag
     2341 gccagcagat ggtggccgaa ggtgatgggc tgcgccgtct gcaggtgggt gaagcccggc
     2401 atgatggtgg cggcatattc ctcggcacgg tcgatcaatg ccgcctgcag gtcgcggagc
     2461 atcggctcca ggcggtcgat cgtgtcgcgc acccacagcc ggacgtcgag cgcgatctgg
     2521 tcgttgcgcg agcgcgccgt gtgcagccgg ccgccggccg ggccgataag cgcggtcagc
     2581 cgcgcctcga cgttgaaatg gatgtcctcg agcttggtcg agaacttgaa gcggccggat
     2641 tcgatctcct cgcgcacctt ggccaggccg cgcttgatgg cgcggccgtc cttcgccgtc
     2701 aggattccct gggcgaccag catgtcgcag tgggcgagcg agcccgcgat atcctgcgcg
     2761 taaagccggc gatcgaaacc gatggaggcg ttgatcttct ccatgatttc cgccggcccg
     2821 agcttgtagc ggccgcccca catcgtgttg gaggggctct tcggcgctcg cgcagtcgtg
     2881 ttcttccgtg ccatgaatat aagccattga tcctttagga acgcggctta tggcacatcc
     2941 cgaccgagtt ttcctcccca cccgacggct cgtcctgagc accgccatgg ccatcgttgc
     3001 tttgcccgcc acggcgcgag ccgaggtgtc caagagcctg atcaggggcg ccatggc
//
LOCUS       DASWGA010000454         4904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1701327, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000454 DASWGA010000000
VERSION     DASWGA010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4904
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1701327"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..763
                     /locus_tag="VF991_10855"
     CDS             <1..763
                     /locus_tag="VF991_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cyclohexanone monooxygenase"
                     /protein_id="HEX9556987.1"
                     /translation="MGSFSDLLLNAESNRTAADFVRAKIREVVKDPELADKLAPNNVI
                     GCKRLCVDTGYWETFNLPHVTLVDVSDEPIERITAHGLSAKGRDYTFDCLVLATGFDA
                     MTGALLRVDIRGRDGQSLQDKWKEGPKTYLGLTMAGFPNLFTITGPGSPSVLTNMLPS
                     IEQHVEWIADCIEYMRSRGATLIEADAAAEEAWVGHVGETAGGTLRSTCSSWYLGANI
                     PGKPRVFMPYIGGFPAYIERCEAIVKAGYEGFALV"
     gene            complement(1249..2856)
                     /gene="ggt"
                     /locus_tag="VF991_10860"
     CDS             complement(1249..2856)
                     /gene="ggt"
                     /locus_tag="VF991_10860"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9556988.1"
                     /translation="MIDIRAGRPAVLAPHGMVTSPHGLASRAGADMLREGGSAIDAAI
                     AASAVLSVVYPHMTGIGGDAFWLIHDGKTRAVRYIDGGGRATSRGTIDAFAKLGLDEV
                     PYKGVLPGTLTVPGAVASWGMAHAAYGRLTLKRCLESAIGHAREGFPATARLAHWRDA
                     ARAELAKSPEAAAIFLKEGGRIANPDLARTLEAIASDGWYGFYDGEVARELVCYSDAN
                     GGFFTADDLKAQQARWGEPIKGRYRDVTIYETPAPTQGFAVLEMLNLLEPFELHRKPF
                     LGPDSVHLMVQAKQLAYHDRDRYLADPRFADLPMERLISKTYAHERRGLMDPARALPW
                     DRIPSYGSLAGDTVYIAAVDRAGNAASLIHSLYGSFGAAVVAGRTGVVLQNRAAYFSL
                     DPKSPNRVEPGKTPLHTLIASLAFRDDKLWSVLGCMGADGQPQIHLQAYSAMIDHGLD
                     IQQALEMPRFLSGRFAIGEARDTLHIEARFAPATIAELERRGHQVNRWGDWNESAGHA
                     HGITIDPASGMLAGGADPRSDGEAVGC"
     gene            3001..3645
                     /locus_tag="VF991_10865"
     CDS             3001..3645
                     /locus_tag="VF991_10865"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX9556989.1"
                     /translation="MLKILRSIAMPALLLAIGTGLATAVAQSAPPGLPPGVYMGEADY
                     KQATAGTYTLDPDHASVIARVSHLRYSYSIFRFDRLSATLTWEPANVGNSALTAKVET
                     ASITSNVKGFGAQLAGDEFLKARSFPEATFVSTAFRQTSSGRGKVDGQLTLMGKTKPV
                     TFDVELVGAGKGFAGQPRIGINARTSINPVDYGLPALLGDAIEIVVDSEFQRNP"
     gene            3642..4109
                     /locus_tag="VF991_10870"
     CDS             3642..4109
                     /locus_tag="VF991_10870"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9556990.1"
                     /translation="MNVFTKPTAQELVLTRDLAAPRAQVFAAWTDERLASRWWAPRNF
                     TPLSCEMDVRPGGAWRRRMRAPDGTIVTKWGVYREVTAPERLVFTYITEDGGSIDPET
                     LVTVTFADLGGRTRLTLRHTAFETDTARLNHQGGWTSALERLATFIATDGAAA"
     gene            4106..4621
                     /locus_tag="VF991_10875"
     CDS             4106..4621
                     /locus_tag="VF991_10875"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9556991.1"
                     /translation="MSKTRSARLHDVLAAHVSRGDMPGLVALVSRRGETQVEAIGRQS
                     FESDVAMRRDTIFRIASMSKPITAAATLILVEQCKLRLDDPVDAFLPELADRRVLKSL
                     EGPVDDTVPAKRPISVRDLLTFTFGLGAVMVWPARHPIQKAMADVGLAPGPGQLDLSA
                     DDFMKRLAACR"
     gene            4621..>4904
                     /locus_tag="VF991_10880"
     CDS             4621..>4904
                     /locus_tag="VF991_10880"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9556992.1"
                     /translation="MHQPGERWLYHTGSDVLGVLIARASGQPFADFLRDHLFEPLGMR
                     DTGFQVPADKPGRLASAYMMDRDKGKLTFFDDARDSRWRKPPPFAAGGSGL"
BASE COUNT          851 a         1634 c         1610 g          809 t
ORIGIN      
        1 catgggctcg ttctccgacc tgctgctgaa tgccgaatcg aacaggacgg cggccgactt
       61 cgtgcgcgcc aagatccgcg aggtggtgaa ggatcccgag ctcgccgaca agctcgcgcc
      121 gaacaacgtc atcggctgca agcggttgtg cgtcgacacc ggctactggg aaacgttcaa
      181 cctgccgcac gtcaccctgg tcgatgtgag cgacgagccg atcgagcgca tcacggcgca
      241 cgggctcagc gccaagggcc gcgattacac gttcgattgc ctggtgctgg cgaccggctt
      301 cgacgccatg accggcgcgc tgctgcgggt cgatattcgc ggccgcgacg gtcaatcgct
      361 gcaggacaag tggaaggagg gccccaagac ctacctcggc ctcaccatgg cgggcttccc
      421 caacctgttc accatcaccg gcccgggcag cccgtcggtg ctgaccaaca tgctgccgtc
      481 gatcgaacag cacgtcgaat ggatcgccga ctgcatcgaa tacatgcgct cgcgcggcgc
      541 cacgctgatc gaggccgacg ctgcggccga ggaggcctgg gtcggccatg tcggcgagac
      601 ggcgggcggc acgctgcgct cgacctgcag ctcgtggtac ctcggcgcca acattcccgg
      661 caagccgcgc gtcttcatgc cctatatcgg tggcttcccg gcctatatcg agcgctgcga
      721 agcgatagtg aaagcgggct acgagggctt cgcgctcgtc tgacgttttc cgcaagaatc
      781 atcccgccct agggcagatt ccgaagagcc gaaaccatac cacctcactc tgaggagccg
      841 cgcaaagcgc ggcgtctcga agtgaggtat ttctgtcgaa acggaacacg ttctagtcga
      901 cgggaatctg aagtgacatc ttgactatta cttcaagacg tggtttactc gcccgctgga
      961 ctgctgtcag aatcggtgga actcgccatt gctgaatctt gtaattcact taagcataac
     1021 tacatgggat ctcgtcgcaa tgcccctcgg cagttcgaaa acgaccgccg aaaacgccgg
     1081 aaacgccgct aacctaatat tgttgcgcgc gatgcacccg gccacagcgt caagggtagc
     1141 ggaaagtgcg gaaaccccct ggagtgaagt tgagccgtga aaatcgttag cggaaattgc
     1201 ggaaactgcg ggaattggtc gaatcgctgt tgagatatgc gaaaatgttc aacacccgac
     1261 cgcctccccg tcactgcgcg ggtcggcgcc gcccgccagc atgccgctcg ccggatcgat
     1321 ggtgatgcca tgcgcatggc ccgccgattc gttccagtcg ccccagcggt tgacctgatg
     1381 gccgcggcgt tccagctcgg cgatcgtcgc gggcgcgaag cgcgcctcga tgtgcagcgt
     1441 gtcgcgcgct tcgccgatgg cgaagcggcc ggacaggaag cgcggcatct ccagcgcctg
     1501 ctggatgtcg aggccgtgat cgatcatggc gctgtaggct tgcaaatgga tttgcggctg
     1561 gccgtcggcg cccatgcagc ccagcacgct ccacagcttg tcgtcgcgga aggcgagcga
     1621 ggcgatcagc gtgtgcagcg gcgtcttgcc cggctcgacg cggttgggac tcttgggatc
     1681 gagcgaaaaa taggcggcgc ggttctgcag caccacgcca gtgcggccgg ccaccaccgc
     1741 cgcgccgaaa ctgccataga gcgaatggat cagcgacgcc gcgttgcccg cgcggtcgac
     1801 ggcggcgatg tagaccgtgt cgcccgccag gctgccatag gagggaatgc ggtcccacgg
     1861 cagggcgcgc gccgggtcca tcaagccgcg gcgttcatgg gcgtacgtct tggagatcag
     1921 ccgctccatc ggcaggtcgg cgaagcgtgg atcggcgaga tagcggtcgc ggtcgtgata
     1981 ggcgagctgc ttggcctgca ccatcagatg cacggaatcg gggccgagga atggcttgcg
     2041 gtgcagttcg aagggctcca gcaggttcag catctcgagc acggcaaagc cctgggtcgg
     2101 cgccggcgtc tcgtagatgg tcacgtcgcg atagcggccc ttgatcggct cgccccagcg
     2161 cgcctgctgc gccttcagat cgtcggccgt gaaaaagccg ccgttggcgt cggagtaaca
     2221 caccagctcg cgcgccacct cgccgtcgta aaagccgtac cagccgtcgc tggcgatggc
     2281 ttcgagcgtg cgcgcgaggt cggggttggc gatcctgccg ccttccttca ggaagattgc
     2341 cgccgcctcg ggactcttcg ccagttccgc ccgcgcggcg tcgcgccagt gggccagccg
     2401 cgccgtcgcc gggaagccct cgcgggcatg gccgatcgcg ctttccaggc agcgcttcag
     2461 cgtcagccgg ccataggctg catgcgccat gccccagctg gcgacggcgc caggaacggt
     2521 gagcgtgccg ggcagaacgc ccttgtacgg cacttcgtcc agaccgagct ttgcgaaggc
     2581 atcgatcgtg ccgcgcgagg tggcacggcc gccgccatcg atgtaacgca cggcgcgcgt
     2641 cttgccgtcg tggatcagcc agaaggcgtc gccgccgatg ccggtcatgt gcgggtagac
     2701 gacggacaac accgcgctgg cggcgatggc ggcatcgatc gccgagccgc cctcgcgcag
     2761 catgtcggcg ccggcacggc tggccagccc atgcggcgaa gtcaccatgc cgtgcggcgc
     2821 gaggacagcc ggacggccgg cgcgaatatc gatcatgacg ccttggttac tagggccact
     2881 gtcatgacac aatttttttc aacgccggcc cgagcaacga tagcgcgatg gcaggttgac
     2941 agaaacgttc gcccttccta atagttaact cataggttaa gtaacgtacc gaaggtcact
     3001 atgctgaaaa tcctgcgaag catcgccatg ccggccctgc tgctggccat cgggacgggc
     3061 ttggcgactg ctgtggcgca atccgcgcca ccgggcctgc cgcccggcgt ctacatgggc
     3121 gaggccgact acaagcaggc gacggccggc acctacacgc tcgatcccga ccacgcctcg
     3181 gtcatcgcgc gcgtgtcgca cctgcgctac tcctacagca tcttccgctt cgatcgcctg
     3241 agcgcgacct tgacctggga acctgccaac gtcggcaatt ctgcgctgac ggccaaggtc
     3301 gagacggcgt cgatcacctc caacgtcaag ggcttcggcg cgcagctggc gggcgatgag
     3361 ttcctgaaag cgcgcagctt tcccgaggcc acgttcgtgt cgactgcgtt ccggcaaacc
     3421 agttcgggcc gcggcaaggt cgacggccag ctcaccttga tgggcaagac caaaccggtg
     3481 accttcgacg tcgagctggt gggcgccggc aagggcttcg ccggacagcc gcgcatcggc
     3541 atcaatgcgc gcaccagcat caatccggtg gattacggcc tgccggcgct gctgggtgat
     3601 gcgatcgaga tcgtggtcga cagtgaattc cagaggaacc catgaacgtc ttcaccaaac
     3661 cgaccgcgca ggagctcgtc ctgacgcgcg acctcgcagc gccgcgggcc caagtcttcg
     3721 cggcgtggac cgacgagcgg ctggcctccc gctggtgggc gccccggaac ttcacgccgc
     3781 tgtcctgcga gatggacgtg cgtccgggcg gcgcctggcg tcgccgcatg cgcgcgcccg
     3841 acgggaccat cgtcaccaag tggggtgtct atcgcgaggt cacggcgccc gagcggctgg
     3901 tcttcaccta catcaccgaa gatggcggca gcatcgatcc tgagacgctg gtgacggtga
     3961 ccttcgccga tctcggcggc cgcacgcggc tgacactgcg gcacaccgcg ttcgaaaccg
     4021 acaccgcgcg tctcaaccac cagggaggct ggaccagcgc cctggagcgg ctggcgactt
     4081 tcatcgccac ggacggcgcg gcggcatgag caagacgcga tcggcgcgcc tgcacgacgt
     4141 gctggcagct cacgtgtcgc gcggcgacat gccgggcctg gtggcgctgg tgagccggcg
     4201 cggcgagacg caggtcgagg caatcggccg gcagtcgttc gaatcagacg tcgccatgcg
     4261 gcgcgacacc atcttccgca tcgcctcgat gagcaagccg atcaccgccg cggcgaccct
     4321 catcttggtc gagcaatgca agcttcgcct cgacgatccg gtcgacgcgt tcctgcccga
     4381 gctggcggat cgccgcgtgc tcaaaagcct ggaggggccg gtcgacgata cggtgccggc
     4441 gaagcgcccg atcagcgtgc gcgatctctt gaccttcacc ttcggcctcg gtgcggtgat
     4501 ggtctggccg gccaggcatc cgatccagaa ggcgatggcc gatgtcggcc tggcgcccgg
     4561 tccgggacag ctcgacctct cggccgacga tttcatgaag cggctggcag cctgccgctg
     4621 atccatcagc ccggcgagcg ctggctctat cacaccggct ccgacgtcct gggcgtgctg
     4681 atcgcgcgcg cctcgggcca acccttcgct gatttcctgc gcgaccatct gttcgagccg
     4741 ctcggcatgc gcgacaccgg cttccaggtg ccggcggaca agcccggccg gctggccagc
     4801 gcctacatga tggatcgcga caagggcaag ctcaccttct tcgacgatgc ccgcgacagc
     4861 cgctggcgta agccgccgcc cttcgcggcc ggcggctcgg gcct
//
LOCUS       DASWGA010000455         1611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1194125, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000455 DASWGA010000000
VERSION     DASWGA010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1194125"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VF991_10885"
     CDS             complement(<1..489)
                     /locus_tag="VF991_10885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556993.1"
                     /translation="MSAPSQAVANKQPFDIGRAVYLALNLALLAFLLAPIAIVLIFAL
                     NPTPYISFPPVGVSLRWFEKFFASPEFMNALFLSLWVAGCVLVLSILIGGACALALAR
                     GNLPGRMFLTAFFMSPLMLPAILTGLALFQSYLLAGIGRPVWGLILAHTLVAVPYVIR
                     TTL"
     gene            complement(486..1364)
                     /locus_tag="VF991_10890"
     CDS             complement(486..1364)
                     /locus_tag="VF991_10890"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9556994.1"
                     /translation="MASASSRPAPIAWLLAPALLLFVLFFVLPFGVMAAMSFFSGNPV
                     TNPDAFLTTRHYERFIVDSAGIYHDALWATLRIGLITTIVSLLIGYPLAHWMARMQSR
                     LGHALVLMAVIAPMLTGIVVRTFAWMTILQDKGVINTLLIQWGVIGKPLPLMYNEFGT
                     VVALVHIYVPFMVLTLTGVIGRIDERLEQAARSLGAGRLRAFVEVTLPLSLPGILAGS
                     LLVFALSISAYVTPSLMGGTDVLTLPMLIAQQVGTSFNPNFAGALGVILLLVSLAIVV
                     AYNRILARLSGEQGLA"
BASE COUNT          335 a          488 c          570 g          218 t
ORIGIN      
        1 aagggtggtg cggatgacat agggcaccgc caccagggtg tgggccagga tcagacccca
       61 caccggccgg ccgatcccgg ccagcaggta ggattggaac agcgccaggc cggtcaggat
      121 ggcgggcagc atcaggggcg acatgaagaa ggcggtgagg aacatccggc ccggcaggtt
      181 gccgcgcgcg agcgcaagcg cgcaggcgcc gccgatcagg atggaaagca ccagcacgca
      241 gcccgccacc cacagcgaca gaaagagcgc gttcatgaat tccgggctgg cgaagaattt
      301 ttcgaaccag cgcaggctca ctccgaccgg cggaaaggag atgtagggcg tggggttgag
      361 cgcaaagatc agcacgatgg cgatgggcgc cagcaggaag gcgagcagcg ccaggttcag
      421 cgccaagtag acggcgcgcc cgatgtcgaa cggctgtttg ttggcgacgg cttgggaggg
      481 cgcgctcatg ccaacccctg ctcgcccgac aggcgggcga ggatcctgtt gtaggcgacg
      541 acgatcgcca gcgataccag cagcaggatg acgcccagcg cgccggcgaa attcgggttg
      601 aaactggtgc cgacctgctg ggcgatcagc atcggcaagg tcagcacatc ggtgccgccc
      661 atcagcgagg gcgtgacata ggcgctgatc gagagcgcga acaccaacag tgagcccgcc
      721 aggatgccgg gcaggctgag cggcagggtg acctcgacga aggcgcgcag ccggccggcg
      781 cccaggctgc gcgccgcctg ctccagccgc tcgtcgatgc ggccgatcac gccggtgagc
      841 gtcagcacca tgaagggcac gtagatatgg accagcgcca ccaccgtgcc gaactcattg
      901 tacatcagcg gcagcggctt gccgatcacg ccccactgga tcagcagcgt gttgatgacg
      961 cctttgtcct gcaggatggt catccaggcg aaagtgcgca cgacgatgcc ggtcagcatg
     1021 ggcgcgatca ccgccatcag caccagagcg tgacccaacc gcgactgcat gcgcgccatc
     1081 cagtgcgcca gcggatagcc gatcagcagc gagacgatcg tggtgatgag gccgatgcgc
     1141 agggtcgccc acaaggcgtc gtggtagatg ccggcggaat cgacaatgaa gcgctcgtag
     1201 tggcgcgtgg taaggaaggc gtcggggttg gtgacggggt tgccggaaaa gaacgacatc
     1261 gccgccatga cgccgaacgg cagcacgaag aacagcacga agagcaacag cgccggcgcc
     1321 agcagccagg cgatcggagc gggtcgggaa gaagcggatg ccatgcgtgc cgtatcgtgg
     1381 ccgaaggcga tgcttcggtc cacgccgaag gacatggcgc gccccaagta acggcaggcg
     1441 cgctatggca tcgaaattgc cgcgctcgcg cgacagcgct acttcgtcgc ctgcttcaga
     1501 taggccacga gatcggcgag ttggccggcc tgcttgatgc cgttgaacac catcttggtg
     1561 tccggcacct tgcccttggg attgcgggtg tagtcggcca gcgtcgcttc g
//
LOCUS       DASWGA010000456         6229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_684132, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000456 DASWGA010000000
VERSION     DASWGA010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6229
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_684132"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VF991_10895"
     CDS             <1..459
                     /locus_tag="VF991_10895"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEX9556995.1"
                     /translation="GQFGIGLWHQTGILTAPGVTQDGAGGVYLFGSQRIAHGVNERVP
                     SSGISSFFQFGASNAQTSPINQYYGAGLTGFGLIGDRPLDSMGIGAALSRLNPVLFAR
                     SYELMFQAYYQAHLFAATFLQPTVSFIPTPGAAPDLPPTLTTTLRLTVLF"
     gene            527..1630
                     /locus_tag="VF991_10900"
     CDS             527..1630
                     /locus_tag="VF991_10900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9556996.1"
                     /translation="MTRIVSRLAIALFVAGFAVSSASAQGTAGLPDYLAAITGTTPQT
                     PAALATRDVLQLNASMFALYDAAAGTFQRNIMDRHPVILALFSGAGGRMIFYRSGRPP
                     EEAPSVPIVYQVMKSTGHSTMAISEVVMPYVGNAADKSWMAPLLGYRTQMKTALDGVD
                     ALPIQEDWKPAVKNILGNNVAFMDDCLAKGVITLEALQAFAKKQGPDIKLIINWAAST
                     QVKHWMGVLDGWRASLGPDWDKVYAAANTIYVARQNNVLFSTLAQYFPPEAINDRLML
                     IETISFTTTPQEMLTSMVRIISDRSVGALFFGNDKLMDFELMGGDARKTIISEMQRRG
                     KQPFLPPAVPFGSHQWPTLVTPGPGATSIDDLK"
     gene            1643..2458
                     /locus_tag="VF991_10905"
     CDS             1643..2458
                     /locus_tag="VF991_10905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEX9556997.1"
                     /translation="MNLNTIVDVKRPKSFEEIEWREGHAFLGGGTWLFSEPQVATDTL
                     VDLEQLGWPPLTMTPSGLEIAATCKIAELHDFKGPPAWRAVPLVDKCIDAFLMSFKIW
                     NAATVGGNVCMSLPAGAMISLTAALEGLCNLWPQNGSKPRAVPVVDFVTGNHMNVLQK
                     GELLRSIFLPASALTKRFAMRQVSLTHLGRSAALIIGTVADRDYDFLLTISAATPRPV
                     HLRFEKTPSAAALRQAIEERLPPNAWFHDVHGSAPYKRHVTFYLAEQIRAELS"
     gene            2455..5169
                     /locus_tag="VF991_10910"
     CDS             2455..5169
                     /locus_tag="VF991_10910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9556998.1"
                     /translation="MSNYEVNGRLYSAEPKPGQCLRTFLRDMEVFGVKKGCDAGDCGA
                     CTVWLDGKPFHSCLVPAFRGEGRKITTVEGLAKNGELHPIQKAFHDAQAFQCGYCAAG
                     MMMTIASAAFDEAHKADLPHALKGNICRCTGYRSIVDALNGKSNIEEDVAGKASGASL
                     PNPFTDAILTGKARYTMDIAIEGLLHLKVLHSPHAHARIKSIDKSKALAVPGVIAVYT
                     WEDVPRRLYSTALHEDHLVDPDDTYMLDNVARFVGQRLAAVVAESEAAAEAGVRALVV
                     DYEILRAVFDPVAAMEPGAPLLHDKTELVTQNRNIFCTLQGEIGDVAQGFKEADAVHE
                     MTYSTSRVQHVHLETHGSIAYKGDDGRWHVRTSSQGPFPSRAKLAHLMGVPAREIHVF
                     TERVGGGFGGKQEMVSEDLPLFATMKLDGRPVKWEWSREEEFIGATTRHQMTTKVKIG
                     AKKDGTLTALDVHVVSNTGAYGNHASETLAAAMGSPVAAYRCANKKGVGHVVYTNMIP
                     AGGFRGYGASQTMYAMECAIDELARLLGIDPFEMRRKNVVKPGDNVESIWKEPGDASF
                     GSYGIDECLDIVERELKKGNGVAKPAGEEWAEGTGVALAMLECGPPTEHRSGADMRLL
                     ADGTYHLACGSSEMGQGIATAHKQIAASIVGVRALDVDIINADTDRTPYDTGTFASTG
                     TVVAGKAVHITAQAMRDDILDFAGRHTGADRDQCRLDNDAVVCGNKRILLTELHAAGA
                     KVNHRFAVSRRAYLSPRTIAFNVQGVRLAVHRVTGEIRILHSVHAADIGRPINPMQCY
                     GQIDGAVAMGFGWALIENMVHDEGHMVNPQLRNCRVPAFADTPHTDVFFAGTIDSIGP
                     LGAKSQGECAINAVAPAVANALANATGVRFPNLPFTPDRLFSKLGKTK"
     gene            5166..6104
                     /locus_tag="VF991_10915"
     CDS             5166..6104
                     /locus_tag="VF991_10915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEX9556999.1"
                     /translation="MTVSIVTQTCVRPERAEDFARWQGETSTVIATFPGFVEQRLMPP
                     KPPLQVDWVILQRFAALEDAQRWLTSPERQKRLEGAAPMLVGRDDVHIVRDDEGGIKP
                     APVSAVIATRVRPGKEAEYRAWERKIAVAQSKAPGMQGYRFEAPVPGVQEDFVAILRF
                     DSEANLQGWLDSPERKRLVDEAAPLTEEFHTRVAHTGFDQWFRDVAGAAQLPVWKMDM
                     LVLLMLYPIVFLFGIFVGTPLFTNVLHLPFAVSLFLGNIVSVGLTGFLVPWIAVRFGW
                     WLQPASPATALRTNIGGAVLITVIYAVMVVAFWKFF"
BASE COUNT         1105 a         2143 c         1957 g         1024 t
ORIGIN      
        1 gggcaattcg gcatcggcct ctggcaccag acgggcatcc tcaccgcgcc gggcgtcaca
       61 caggacggcg ccggcggcgt ctacctgttc ggctcccagc gcattgccca tggcgtgaac
      121 gagcgcgtcc cgagttcggg catcagcagc ttcttccagt tcggcgccag caacgcccaa
      181 acctctccga tcaaccagta ctacggcgcc ggcctcaccg gcttcggcct catcggcgac
      241 cgtccgctgg attcgatggg catcggcgct gcactgtcgc ggctcaaccc cgtcctgttc
      301 gcccggtctt acgagctgat gttccaggcc tactaccagg cgcacctgtt cgccgcgacc
      361 ttcctgcagc cgaccgtgag cttcatcccg acgccgggcg cggcgcccga cttgccgccg
      421 accctgacga cgacgctgcg tcttaccgtg cttttctaga ggatcgacta gtgacaaacc
      481 gcaacacttg gatagcctat gccgacgacg agtgggggaa atatcgatga ctagaattgt
      541 gtcgcggctc gcgatcgcat tgttcgtggc cggatttgcc gtgagctcgg catccgcaca
      601 ggggaccgcc ggccttcccg attatttggc cgccatcacc ggcacgacgc cgcagacacc
      661 ggcggcactc gccacgcggg acgtccttca gctcaacgct tcgatgtttg cgctgtacga
      721 cgccgccgcc ggcacctttc agcgcaacat catggacagg catcccgtca tcctggcgct
      781 attctcgggt gccggcgggc gcatgatctt ctaccgctcg ggcaggccgc ccgaggaagc
      841 gccgtcggtg ccgatcgtct accaggtcat gaagtcgacc gggcacagca ccatggcgat
      901 ctccgaggtc gtcatgccct atgtcggcaa cgccgccgac aagagctgga tggctccgct
      961 gctgggctat cgcacgcaga tgaagacggc gctcgacggc gtcgacgccc tgcccatcca
     1021 ggaagactgg aagcctgcgg tgaagaacat cctgggcaac aacgtcgcct tcatggacga
     1081 ttgcctggcc aagggcgtaa tcacgctcga ggcgctgcaa gccttcgcca agaagcaggg
     1141 accggacatc aagttgatca tcaactgggc ggcctcgacc caggtcaagc actggatggg
     1201 cgtgctcgac ggctggcggg cgagccttgg cccggattgg gacaaagtct atgccgcggc
     1261 caacaccatc tacgtggcgc gccagaacaa cgtgctgttc agcacgctcg cccagtattt
     1321 cccgcccgag gcgatcaacg accggctgat gctgatcgag acgatctcct tcaccaccac
     1381 gccgcaggaa atgctgacct cgatggtccg catcatctcc gaccgctcgg tgggcgcgct
     1441 gttcttcggc aacgacaagc taatggattt cgagctgatg ggcggcgatg cccgcaagac
     1501 catcatttcg gagatgcagc gccgcggcaa acagccgttc ctgccgcccg ccgtgccgtt
     1561 cggctcccat cagtggccga cgctggtcac gccgggcccg ggcgccacgt cgatcgacga
     1621 tttgaagtga ggatgacgag ccatgaatct caatacgatc gtcgatgtaa agcggcccaa
     1681 gtcattcgag gagatcgaat ggcgcgaggg ccatgccttt ctgggaggcg gcacctggct
     1741 gttctccgaa ccgcaggtcg cgaccgacac gctggtcgat ctcgagcagc ttggctggcc
     1801 gccattgacc atgacgccgt cgggcctgga gatcgccgca acgtgcaaga tcgccgagct
     1861 gcatgacttc aagggcccgc cggcctggcg ggccgtgccg ctggtcgaca agtgcatcga
     1921 tgcgttcctt atgtcgttca agatctggaa cgcagcgact gtcggcggca acgtctgcat
     1981 gtcgctgccg gccggcgcca tgatctccct gacagcggcg ctcgaaggcc tctgcaactt
     2041 gtggccgcag aacggcagca aaccgcgcgc ggttccggtc gtcgacttcg tcaccggcaa
     2101 ccacatgaac gtcctgcaga agggcgaatt gctgcggtcg atcttcttgc ccgcgtcggc
     2161 tctcaccaag cgctttgcca tgcgccaggt gtcgctcacg cacctcggcc ggtcggcggc
     2221 gctgatcatc ggcacggtcg ccgaccgcga ctacgacttc ctgctgacca tcagcgcggc
     2281 gaccccgcgg ccggtgcatc tgcggttcga aaaaacgccg tcggcggccg cgctgcgcca
     2341 ggccatcgaa gaacgcctgc cgccgaacgc ctggttccac gacgtccacg gctcggcgcc
     2401 ctacaagcgc cacgtcactt tctaccttgc cgaacagatt cgcgcggagc tgtcatgagc
     2461 aactacgagg tcaatggccg tctgtactcg gccgaaccga agcccggcca gtgcctgcgc
     2521 accttcctgc gcgacatgga agtattcggc gtcaagaaag gctgcgacgc cggcgactgc
     2581 ggcgcctgca cggtgtggct ggacggcaag cccttccact cctgcctggt gcccgccttc
     2641 cgcggcgagg gccgcaagat caccaccgtc gagggcctcg ccaagaacgg cgagctgcat
     2701 cccatccaga aggcgttcca cgacgcccag gccttccaat gcggctactg cgccgccggc
     2761 atgatgatga cgatagcctc ggccgcgttc gacgaggcgc acaaggccga cctgccgcac
     2821 gccttgaagg gcaatatctg ccgctgcacc ggctaccgct cgatcgtcga cgcgctcaac
     2881 ggcaagagca acatcgagga ggacgtcgcc ggcaaggcca gcggcgccag cctgcccaat
     2941 ccgttcaccg acgccatcct gaccggcaag gcgcgctaca cgatggacat cgcgatcgag
     3001 ggattgctgc acctcaaggt gctgcactcg ccgcatgccc acgcgcgcat caagagcata
     3061 gacaagagca aggccctggc cgttccgggc gtcatcgccg tctatacctg ggaagacgtg
     3121 ccgcgccggc tctacagcac cgcgctgcac gaggaccatc tcgtcgaccc cgacgacacc
     3181 tacatgctgg acaacgtcgc ccgcttcgtc ggtcagagac tcgccgcggt ggtggcggag
     3241 agcgaggcgg ccgccgaggc gggtgtccgc gccctggtcg tcgactacga aatcctgcgg
     3301 gcggtgttcg atccggtcgc cgccatggag cccggcgcgc cgctgctgca cgacaagacc
     3361 gagctcgtca cccagaaccg caatatcttc tgtaccctgc agggcgagat cggcgacgtg
     3421 gcgcaaggct tcaaggaagc cgatgccgtc cacgaaatga cctactcgac ctcgcgcgtg
     3481 cagcacgtcc atctcgagac ccacggctcg atcgcctaca agggcgatga cggccgctgg
     3541 cacgtgcgca ccagctcgca gggcccgttc ccctcgcgcg ccaagctcgc ccacctgatg
     3601 ggcgtgcccg cccgcgaaat ccatgtcttc accgaacggg tcggcggcgg cttcggcggc
     3661 aagcaggaga tggtgtcgga agacctgccg ctgttcgcca ccatgaagct cgacggccgt
     3721 cccgtgaaat gggaatggtc ccgcgaggag gaattcatcg gcgccacgac gcggcaccag
     3781 atgacgacca aggtcaagat cggcgccaag aaggacggca cgctgaccgc gctcgacgtg
     3841 catgtcgtgt cgaacaccgg cgcctacggc aatcacgcca gcgagaccct cgctgccgcg
     3901 atggggagcc cggtcgcggc ctatcgctgc gccaacaaga agggcgtggg ccacgtcgtc
     3961 tacaccaaca tgatcccggc cggcggtttc aggggctacg gcgcctcgca gaccatgtac
     4021 gcgatggaat gtgccatcga cgagctggcg cgccttctcg gtatcgaccc gttcgagatg
     4081 cggcgcaaga acgtcgtgaa gcccggcgac aatgtcgaat cgatctggaa ggagcccggt
     4141 gacgcgagct tcggtagcta cggcatcgac gaatgcctcg acatcgtgga aagggagctc
     4201 aagaagggca acggcgttgc caagcccgcc ggcgaggaat gggcggaggg aaccggcgtg
     4261 gcgctcgcca tgctcgaatg cggtccgccg accgagcacc gttcgggcgc cgatatgagg
     4321 ctgctggccg acggcaccta ccatctcgcc tgcggctcgt ccgagatggg ccaaggcatc
     4381 gccacggcgc acaagcagat cgccgcttcc atcgtcggcg tgcgcgccct cgacgtcgac
     4441 atcatcaacg ccgataccga ccgcacgccc tatgacaccg gcaccttcgc cagcaccggt
     4501 acggtcgtgg cgggcaaggc cgtccacatc accgcccagg cgatgcgcga cgatatcctc
     4561 gacttcgccg gccgccacac cggtgccgac cgcgaccagt gccggctcga caacgatgcc
     4621 gtcgtctgcg gcaacaagcg gatcctgctg accgagctcc atgccgccgg cgccaaggtc
     4681 aatcatcgct tcgcggtcag ccgcagggcc tacctgtcgc cgcgcacgat cgccttcaat
     4741 gtgcagggcg ttcggctcgc ggtgcaccgc gtcaccggcg agatccgcat cctgcacagc
     4801 gtgcatgcgg ccgacatcgg acgtccgatc aatccgatgc agtgctatgg ccagatcgac
     4861 ggcgctgtcg ccatgggatt cggctgggca ctgatcgaga acatggttca tgacgagggc
     4921 catatggtga acccgcagct gcgcaattgc cgcgttccag ccttcgccga cacgccgcat
     4981 accgatgtct tctttgccgg aacgatcgat tcgatcggcc cgctgggcgc caagtcccag
     5041 ggagagtgcg ccatcaatgc ggtggcgccg gcggtcgcca acgcgctggc caatgccacc
     5101 ggcgtgcgtt tccccaacct gcccttcacg ccggaccgtc tgttcagcaa gttgggcaag
     5161 accaaatgac cgtcagcatc gtcacccaga cctgcgtgcg gccggagcgc gccgaggact
     5221 tcgcgcgctg gcagggcgag accagcaccg tcatcgcgac cttcccgggc ttcgtcgagc
     5281 agcggctgat gccgcccaag ccgccgctcc aggtcgactg ggtgatcctg cagcgcttcg
     5341 ccgcgctcga ggacgcgcaa cgctggctga cctcgcccga gcgccagaag cgcctcgaag
     5401 gcgccgcgcc catgttggtg gggcgcgatg acgtgcatat cgtccgcgac gacgaaggag
     5461 gcatcaagcc cgcgccggtc tcggcggtga tcgccacgcg cgtgcggcct ggcaaggagg
     5521 ccgagtaccg cgcctgggag cgcaagatcg cggttgccca gtccaaggcg cccggcatgc
     5581 aaggctaccg cttcgaggca ccggtgccgg gcgtccagga ggacttcgtc gccatcctgc
     5641 gcttcgacag cgaggccaac ctgcagggct ggctcgattc gcccgagcgc aagcggctgg
     5701 tcgacgaggc ggcgccgctc accgaggaat tccacacccg ggtggcgcac accgggttcg
     5761 accagtggtt cagggacgtt gccggagcgg ctcagctgcc ggtgtggaag atggacatgc
     5821 tggtcctgct gatgctttac cccatcgtct tcctctttgg gatattcgtg gggacgccgc
     5881 tcttcaccaa cgtgctccac ctgcccttcg ccgtgtcgct gttcctcggc aacatcgtga
     5941 gcgtcggcct gacgggcttt ctggtgccgt ggatcgccgt gcgcttcggt tggtggctgc
     6001 agcccgcttc gcccgcgacc gcgctcagga ccaacatcgg gggcgcggtc ctcatcaccg
     6061 tcatctatgc ggtgatggtc gtggcgttct ggaaattctt ttagtgtagc ttcggaaacg
     6121 ccggagcctc ttcctcccca ccaatggaga ggtggccgaa cgggaaatga gcgagccaga
     6181 ggctcgcggt ccggcagacc atgaagctgc ggttttccac cttccggcc
//
LOCUS       DASWGA010000457         7887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_813470, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000457 DASWGA010000000
VERSION     DASWGA010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7887
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_813470"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VF991_10920"
     CDS             <1..565
                     /locus_tag="VF991_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEX9557000.1"
                     /translation="SKKKTLLTKDEGNRPDTNLEGLAKLQPVMGPDKWITAGNASQLS
                     DGASAAVIMSDAEAARRGLKPLGIYKGLVVAGCEPDEMGIGPVYAIPKLLKRFGLKMD
                     DIDLWELNEAFAVQVLYCRDKLGIPNDKLNVNGGSISIGHPFGMTGARCTGHILIEGR
                     RRKAKNVVVTMCIGGGMGAAGLFEVVH"
     gene            514..1056
                     /locus_tag="VF991_10925"
     CDS             514..1056
                     /locus_tag="VF991_10925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557001.1"
                     /translation="MHRRRHGRGRLVRGGALKAPARRAWPAGAPSAHAPAEGTTHILR
                     ASLKPKLYRDVEIEGTASLRALAEAIVISFDFDFDHAFGFYSTLTQRYQESPEKYELV
                     ADTGEADPGVGSVERTAVSKAFPKVGKKMLFVFDYGDDWRFQVELVKLGAKKPQTRYP
                     RLLVASGDAPSQYGDEEDWD"
     gene            complement(1057..2232)
                     /locus_tag="VF991_10930"
     CDS             complement(1057..2232)
                     /locus_tag="VF991_10930"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007606105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX9557002.1"
                     /translation="MAMNGVVNIDDLRKLAKRRLPKIAYDFIEGGTDDEVGLVTNEQA
                     FRKARIVPRYLVDVSTRDQSTTLFGRTYSSVIGIAPTGLAGLFRRGADLMLAEAAREA
                     NVPFIMSGSSTASIEDLGKLAPDHGWYQLYSAKDQSVSEDMIKRAGDAGLRTLVFTVD
                     VPEGSNRERNVRNGWGRPLKLTWKTKFEALRHPAWMMEWMKHGTPFFDNWAKYAGPDA
                     TAEKVADLVAYQNRGPMSWKHVERYRELWKGNFVLKGIMHPDDAIRAQALGVDGIMVS
                     NHGARQLDIAPSPLEVLPAIRDAVGDKMTVMLDGGIRRGMDAVVALCLGAKFVFVGRP
                     TLYGVAAGGTPGAAKALAIFRREIDITMAQMGAAKIADLGPQFMMWKDEEDLRRNRR"
     gene            complement(2244..3035)
                     /locus_tag="VF991_10935"
     CDS             complement(2244..3035)
                     /locus_tag="VF991_10935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX9557003.1"
                     /translation="MEMRFFTLLAVGLCLAGLPALAQPKSAGAPDATLIEDLVVANRV
                     LADLGVLDGFGHVSVRHDKDANRYLMSRSMAPALVKADDVLEYDLESTAVDAKGRALF
                     LERFIHGEIYKARPEVRAIVHSHSPSVIPFGVSRTRLQPIYHMSSFLGLDVPVFEIRD
                     IAGPASDLLVRNAQIGAALAKVLGDKTVVLMRGHGSVTVGTSIPQVVFRAYYAEMNAR
                     LQSEAIKLGAVTYLSAEEAAASAKTNDALVMRPWELWKRKVTKPE"
     gene            3104..4072
                     /locus_tag="VF991_10940"
     CDS             3104..4072
                     /locus_tag="VF991_10940"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9557004.1"
                     /translation="MQISHAKRGDGAGLILHHYDFSNFAEKARLMLGFKGLAWQSVEQ
                     PPILPKPNLAPLTGGYRRIPVLQDGADLWCDTCLIARELERRVPQPTLFPAATAGAAQ
                     AIAWWAEQQFMRPVALFVSGINADHMPAGLHEDRARLHGLPPPSIAAVRKAATRNLHL
                     VRPQLKWLADMLHDGRPHLLGDAPCIADFAAYHVVWFFKGRRIDCRQELSPYPRLLAW
                     RDRMAAIGHGTRTDIDPNQALAVARAAEPATPRVSQPQDGDPLPGQRARVRANDNAKD
                     WVEGEVSFIDAHEIALMRHDPDVGRVAVHFPRLGYDWRLSGRHLIA"
     gene            complement(4062..5174)
                     /locus_tag="VF991_10945"
     CDS             complement(4062..5174)
                     /locus_tag="VF991_10945"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9557005.1"
                     /translation="MTRTADVVVIGGGLHGCSTALHLALRGLKPILVEKDYAGRHASG
                     VNAGGVRQLARHIAEIPLSIASMELWEKIEELVGDDCGFASHGTVLVAESEEELAGFR
                     ARVDDLRLKGFTHEELIDRAELKRLVPAVADHCPGGVVSRRDGAADPFRTTQAFRRRA
                     IEKGAEVIEGVTVTGLARSGSAWRVETSAGAIEAPKVVNAAGAWADRIAAQLGEPVPL
                     EVIAPMLMVTSRLPAFIEPVVILRGRKLSFKQLGNGTVVIGGGHLAVPYRDENRTVID
                     WAKLATSARTVWELFPAMREATIVRAWAGIEARMPDDIPVVGPSATSEGVFHQFGFSA
                     HGFQLGPAAGAVVAELVATGATNLPIDGLGIGRFKR"
     gene            complement(5177..6571)
                     /locus_tag="VF991_10950"
     CDS             complement(5177..6571)
                     /locus_tag="VF991_10950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9557006.1"
                     /translation="MNASDLAPSYDIVVIGGGPAGLAAAALAERAGVSTVLFDENPGI
                     GGQIYRGITSTPLANRTILGEDYWAGEALAKEAKASGASIVTGATVWSLDPQRIVGVS
                     IDGKARMIAAQRVIIATGSLERPFPIPGWTLPGVMSAGGAQTALKAHGLLPAGRTVMA
                     GTGPLLWLLAAQLLRAGGRIDAILDTTPRGNWLRALPHLPDFMLSPYFAKGLALLREV
                     RAKVPVHKVDRVEAIGDGKLREVVFGQGRMAADLLLLHQGVVPNVNLALAAGVAHAWN
                     ERQLCFQPVLDQDFASSLPGIAVAGDGAGIAGGTAAAERGRIAAIAAVRALRPDADVP
                     DPRPVRRRLQHEERGRAFLDGLNRPAESFRQPEGDIVVCRCEEVTAQQVRDMVKVGCE
                     GPNQMKAFLRCGMGPCQGRLCGLTVTELIAAERKTTPPEVGYYRLRPPVKPITLAELA
                     SLPISESERKAVER"
     gene            complement(6660..6953)
                     /locus_tag="VF991_10955"
     CDS             complement(6660..6953)
                     /locus_tag="VF991_10955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9557007.1"
                     /translation="MFKRLVERGAPVAITVDGKSISARAGDTVAAAMLAAGIDHCRTT
                     PVTGAPRAPYCLMGVCFDCLVTVDGVGSRQGCLMPVRQGMTVETQLGKREAGR"
     gene            complement(6934..>7887)
                     /locus_tag="VF991_10960"
     CDS             complement(6934..>7887)
                     /locus_tag="VF991_10960"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9557008.1"
                     /translation="LGLAPYAGWTVRSSNAWAGFAETLKEETGLDVCFQRPGGFHLAL
                     SARELEARANILKRLHNQPGIVDYKTEILDHAQVAKMLPDIGPEVVGASYCPLDGHVN
                     SLRLFRTLHIAIHARGVTYLPSHRVDAIARDGGEFRLATAQGEIRANRVALAAGNANM
                     RLAPMVGLIAPMKPERGQIVVTERLRPFLRHPVVTVRQTDEGTVMIGDSKEESTDPAG
                     LTLGISATEAGRAVRQFPLLANVNVVRTWSAIRVMTQDGFPIYDESESHPGAFTVCCH
                     SGVTLAANHALTIAPMIARGALDRSLVAPFSARRFHVQEAG"
BASE COUNT         1262 a         2756 c         2631 g         1238 t
ORIGIN      
        1 ctcgaagaag aagactctgc tcaccaagga cgaaggcaac cgccccgaca ccaacctcga
       61 aggcctcgcc aagctccagc ccgtcatggg gcccgacaag tggatcacgg caggcaacgc
      121 gagccagctc agcgacggcg cctcggccgc ggtgatcatg agcgacgccg aagccgccag
      181 gcgcggcctc aagccgctcg gcatctacaa gggcctggtg gtggccggct gcgagcccga
      241 cgagatgggc atcggcccgg tctatgcgat ccccaagctg ttgaagcgct tcggactcaa
      301 gatggacgac attgacctgt gggagctgaa cgaggccttt gccgtgcagg tgctctactg
      361 ccgcgacaag ctcggcattc ccaacgacaa gctcaacgtc aacggcggct cgatctcgat
      421 cggccatccc ttcggcatga ccggcgcgcg ctgcaccggc cacatcctga tcgagggccg
      481 ccgccgcaag gccaagaacg tcgtggtgac gatgtgcatc ggcggcggca tgggcgcggc
      541 cggcttgttc gaggtggtgc actgaaagcg ccggcacgtc gtgcctggcc cgccggcgcg
      601 ccatcggcgc acgcgccggc ggagggcacg acgcatatcc tgcgggcgtc gctgaagccc
      661 aagctctatc gcgacgtcga gatcgagggc acggcctccc tgcgcgcgct cgccgaggcg
      721 atcgtcattt ccttcgattt cgacttcgat cacgcctttg gcttctacag cacgctgacg
      781 cagcgctatc aggagtctcc cgagaaatac gagttggtcg ccgacacggg cgaggccgat
      841 cccggcgtcg gaagcgtgga acgaacggcg gtctcgaagg ctttcccgaa agtcggcaag
      901 aagatgctgt tcgtgttcga ctacggcgac gactggcgct ttcaggtcga gctcgtcaag
      961 cttggcgcga agaagcccca gacgcgctat cctcggctgc tggtcgcatc gggcgacgcg
     1021 ccgtcgcaat acggcgacga ggaagactgg gactgatcag cggcggttgc ggcgcagatc
     1081 ctcctcgtcc ttccacatca tgaattgcgg gccgagatcg gcaatcttcg cggcgcccat
     1141 ctgcgccatg gtgatgtcga tctcgcgccg gaagatggcg agcgccttgg ccgctcccgg
     1201 tgtgccgcct gcggccacac cgtagagcgt cggccggccg acgaacacga acttcgcgcc
     1261 gagacacagc gccacgacgg cgtccatgcc gcggcggatg ccgccgtcga gcatcacggt
     1321 catcttgtcg ccgacggcgt cgcggatcgc cggcagcacc tcgagtggcg atggcgcgat
     1381 gtcgagctgg cgggcgccat ggttcgacac catgatgccg tcgacgccga gcgcctgcgc
     1441 gcggatcgcg tcgtcgggat gcatgatgcc cttgagcacg aaattgccct tccagagctc
     1501 gcgatagcgc tcgacgtgct tccagctcat cggcccgcgg ttctgataag caacgagatc
     1561 ggccaccttc tcggcagtgg cgtcgggccc ggcatacttc gcccagttgt cgaagaacgg
     1621 cgtgccatgc ttcatccact ccatcatcca ggccggatgc cgcagcgcct cgaacttggt
     1681 cttccaggtg agttttagcg gcctgcccca gccgttgcgc acgttgcgct cccggttgga
     1741 gccttccgga acgtcgacag tgaacaccag cgtccgtagc cccgcatcgc ccgcgcgctt
     1801 gatcatgtcc tcggagaccg actggtcctt cgcggaatag agctggtacc agccatggtc
     1861 gggcgcgagc ttgccgagat cctcgatcga ggcggtgctc gagcccgaca tgatgaaagg
     1921 cacgttggcc tcgcgcgccg cctcggccag catcagatcg gcgccgcgcc ggaacaggcc
     1981 ggcgaggccg gtcggcgcga tgccgatcac gctggagtag gtgcgtccga acagggtcgt
     2041 cgactggtcg cgcgtgctga cgtcgaccaa atagcgcggc acgatgcgcg ccttgcggaa
     2101 cgcctgctcg ttggtgacca agccgacctc gtcgtcggtg ccgccctcga tgaagtcgta
     2161 ggcgatcttg ggcagccgcc gtttggcgag cttgcgcagg tcgtcgatat tcaccacgcc
     2221 gttcattgcc atccgctcct accctattca ggcttcgtca ctttgcgctt ccacagttcc
     2281 cacggccgca tcaccaaggc gtcgttcgtc ttggccgacg ctgccgcctc ttcggcgctg
     2341 agatacgtca ccgcgcccag cttgatcgcc tcggactgca atcgcgcatt catctcggca
     2401 taataggcgc ggaagacgac ctgcgggatc gaggtcccga ccgtcaccga gccatggccg
     2461 cgcatcaaca cgacggtctt gtcacccagc accttggcga gagcagcgcc gatctgggcg
     2521 ttgcgcacca gaaggtcgct cgccggaccg gcgatatcgc ggatttcgaa caccggcacg
     2581 tccagcccca ggaacgagct catgtgatag atcggctgca gcctggtccg cgacacgccg
     2641 aaggggatga ccgacggcga atggctgtgg acgatcgccc tgacctcggg ccgcgccttg
     2701 tagatctcgc cgtgaatgaa ccgctcgagg aacagcgctc gccccttggc atcgacggcg
     2761 gtgctctcga gatcgtactc gaggacatcg tcggccttga ccagcgccgg cgccatgctg
     2821 cgcgacatca gatagcggtt ggcgtccttg tcgtggcgta ccgagacgtg gccgaagccg
     2881 tcgagcacgc cgagatcggc gagcacccgg ttggcgacga caaggtcctc gatcagcgtc
     2941 gcatcgggcg cgccggccga cttgggctgc gcgagggccg gcaggccggc caggcaaagc
     3001 cccaccgcca gcagagtgaa gaagcgcatt tccatcctgt ctatcgttgc gccgattttg
     3061 accgtctttg ctgctccctg ccagcaatgt tagaccgacc gccatgcaaa tcagccacgc
     3121 aaaacgcggc gacggggccg gtctgatcct gcatcactac gacttctcca acttcgccga
     3181 aaaggcgcgg ctgatgctgg gcttcaaggg cctggcgtgg cagagcgtcg agcagccgcc
     3241 gatcctgccc aagcccaacc tcgcgccgct gaccggcggc tatcgccgca tccccgtgct
     3301 gcaggacggc gccgatctgt ggtgcgacac gtgcctgatc gcccgcgagc tggaacggcg
     3361 cgtgcctcag cccacgctct ttcctgccgc gacggccggc gccgcccagg ccatcgcctg
     3421 gtgggccgag cagcagttca tgcgccctgt cgcgctgttc gtctccggca tcaatgccga
     3481 ccacatgccg gccggcctgc acgaggaccg cgcccgcctg catggcctgc cgccgccctc
     3541 gatcgcggcg gtgcgcaagg ccgctacccg caaccttcat ctcgtgcgcc cgcagctcaa
     3601 gtggctcgcc gacatgctgc acgacggccg gccccatctg ctgggcgacg cgccctgcat
     3661 cgccgacttc gccgcctatc acgtcgtgtg gttcttcaag ggccgccgca tcgattgccg
     3721 ccaggagctt tcgccctacc cgcgcctgct ggcgtggcgc gaccgcatgg cggcgatcgg
     3781 ccacggcacg cgcaccgaca tcgatcccaa ccaggcgctt gccgtcgccc gcgccgccga
     3841 gccggcgacg ccgcgggtct cgcagccgca ggacggcgat ccgctgcccg gccagcgggc
     3901 gcgcgtgcgc gccaacgaca atgccaagga ctgggtcgaa ggcgaggtct ccttcatcga
     3961 cgcgcacgag atcgcgttga tgcgtcacga ccccgacgta ggccgcgtcg ccgtgcactt
     4021 cccgcgactg ggctacgact ggcggctgtc aggacgacac ctcatcgctt gaatctcccg
     4081 atgccgaggc cgtcgatcgg caggttggtc gcaccggtgg cgaccagctc ggccacgacg
     4141 gcgccggcag cgggaccgag ctggaagccg tgggcggaaa agccgaactg gtggaatacg
     4201 ccctcggacg tcgcgctcgg gccgaccacc gggatgtcgt cgggcatgcg cgcctcgatg
     4261 ccggcccagg cgcgcacgat ggtggcctcg cgcatcgccg gaaacagctc ccacaccgtg
     4321 cgcgcgctgg tcgcgagctt ggcccagtcg atcaccgtgc ggttctcatc gcgatacggc
     4381 acggcgagat ggccgccgcc gatcaccacg gtgccgttgc caagctgttt gaaggaaagc
     4441 ttgcggccgc gcaggatgac gacgggctcg atgaaggcgg gcagccggct ggtcaccatc
     4501 agcatgggcg cgatcacctc gagcggcacc ggctcgccca gttgcgcggc gatgcgatcg
     4561 gcccaggcgc ccgcggcgtt caccaccttg ggcgcctcga tcgccccggc gctggtctcg
     4621 acccgccagg ccgagcccga gcgcgccagc cccgtcacgg tcacgccctc gatcacctcg
     4681 gcgcccttct cgatggcgcg acggcggaac gcctgcgtgg tgcgaaatgg atcggccgcg
     4741 ccgtcgcgcc gcgagaccac gccgcccggg caatggtccg ccaccgccgg caccaggcgt
     4801 ttgagctccg cgcgatcgat cagctcctcg tgggtgaatc ccttcagccg gagatcgtcg
     4861 acgcgggcgc gaaagcccgc cagttcctcc tcgctctcgg ccaccagcac cgtgccgtgg
     4921 ctcgcaaacc cgcaatcgtc gccgaccagc tcttcgatct tctcccacag ctccatcgag
     4981 gcgatggaca gggggatctc ggcgatgtga cgggcgagct gacgcacgcc gccggcattg
     5041 acgcccgagg cgtggcgacc ggcatagtcc ttctcgacca aaatcggttt caggccgcgc
     5101 agcgccagat gcagcgccgt cgagcagcca tgcaggccgc cgccgatcac caccacatcg
     5161 gcggtacgag tcattcctag cgctccacgg ccttgcgctc gctctcgctg atcggcagcg
     5221 aggcgagctc ggccagggtg atcggcttca ccggcggacg caggcggtag tagccgacct
     5281 cgggcggcgt cgtcttgcgc tcagccgcga tcaactcggt gaccgtgagg ccgcacagcc
     5341 gaccctggca cggtcccatg ccgcagcgca ggaaggcctt catctgattg gggccctcgc
     5401 agccgacttt gaccatgtcg cgcacctgct gggccgtcac ctcctcgcag cggcagacca
     5461 cgatgtcgcc ttcgggctgc cggaacgact ccgccggacg attgagcccg tcgaggaagg
     5521 cgcggcccct ctcctcgtgc tgcaggcgtc gccgcacggg ccggggatcg ggcacatcgg
     5581 cgtcgggtct tagcgcgcgc accgcggcga tggcagcgat gcgcccgcgc tcggcggccg
     5641 ccgtgccgcc cgcgataccc gcgccatcgc ccgccacggc gatgccgggc agggagctgg
     5701 cgaaatcctg atcgagcacc ggctggaagc agagctggcg ctcgttccag gcgtgggcca
     5761 cgccggctgc aagggcgaga ttgacgttgg gcacaacgcc ctggtgcaac agaagaagat
     5821 cggccgccat gcggccctgg ccgaagacga cttcacgcag cttgccgtcg ccgattgctt
     5881 cgacgcggtc gaccttgtgc accggcacct tggcccgcac ctcgcgcaac agcgccaggc
     5941 ccttggcgaa gtacggcgac agcatgaagt ccggcaaatg cggcagcgcg cgcagccagt
     6001 tgccgcgcgg cgtggtgtcg aggatggcgt cgatcctgcc gccggcgcgc aggagctgcg
     6061 ccgccagcag ccagagcaac ggcccggtcc cggccatcac cgtgcggccg gccggtagaa
     6121 ggccgtgggc cttgagcgcc gtctgcgcgc cgcccgccga catgacgccg gggagggtcc
     6181 agccgggaat tggaaacggc cgctccaagg agcccgtggc gatgatgacc cgttgcgcag
     6241 cgatcatgcg cgccttgccg tcaatggaga cgccgacgat cctctgcgga tcgaggctcc
     6301 ataccgtggc gccggtcacg atcgaggcgc cgctggcctt ggcttctttg gcgagcgctt
     6361 cgcccgccca gtagtcctcg cccaggatgg tgcggttggc gagcggcgtc gaggtgatgc
     6421 cgcgatagat ctggccgccg atgccgggat tctcgtcgaa cagcacggtc gagacgccgg
     6481 cgcgctccgc cagcgctgcc gcggcgagac cggccggccc gccgccgatc acgacgatgt
     6541 cgtaggatgg ggcgaggtcg gaggcgttca ttgggcgcct ctttgtcttt tggaccgcgc
     6601 gcgtcccgcg cgctcatgag gcgcgcgaga cgcgcgcggt ccggaagaga atgatggcct
     6661 catcgcccgg cctcgcgctt gccgagctgc gtctccacgg tcatgccctg gcgcaccggc
     6721 atcaggcagc cctggcggct gccgacgccg tcgaccgtga ccaggcagtc gaagcagacg
     6781 cccatcaggc aatagggggc gcgcggcgcg ccggtaaccg gcgtggtccg gcaatggtcg
     6841 atgccggccg ccagcattgc tgcggcgacc gtgtcgccgg cccgcgcgct gatgctcttg
     6901 ccgtcgacgg tgatcgcgac cggcgcgccc cgctcaacca gcctcttgaa catggaacct
     6961 ccgcgcactg aaaggagcga ccagcgatct atcgagggca ccgcgcgcga tcatcggcgc
     7021 gatggtgagc gcgtggttgg ccgcgagcgt cacgccggaa tggcagcaca cggtaaaggc
     7081 gccggggtgg ctctcggatt cgtcgtagat cggaaaaccg tcctgggtca tgacgcgaat
     7141 ggcgctccag gtacgcacga cattgacgtt ggcgagcagc gggaactggc gcaccgcgcg
     7201 cccggcttcg gtggcgctga tgcccagcgt gagacctgcc ggatcggtgc tctcctcctt
     7261 ggaatcgccg atcatcaccg tgccctcatc ggtctggcgc acggtcacga cgggatggcg
     7321 aaggaacggc cgcaggcgct cggtgacgac gatctggccg cgctcgggct tcatcggcgc
     7381 tataagtccg accatgggcg ccagccgcat gttggcgttg cccgccgcca gggccacgcg
     7441 gttggcgcgg atctcgccct gcgccgtcgc cagccggaac tcgccgccgt ctcgagcaat
     7501 ggcgtcgacg cgatggctcg gcagataggt gacgccgcgc gcgtggatcg cgatgtgcag
     7561 ggtgcggaac aggcgcagcg agttcacatg gccgtcgagc ggacagtagc tcgcgcccac
     7621 cacctcgggg ccgatgtcgg gtagcatctt tgcgacctgc gcatggtcca gaatctcggt
     7681 cttgtagtcg acgatgcccg gctggttgtg caggcgtttc aggatgttgg cgcgcgcctc
     7741 gagctccctc gccgacagcg ccaggtgaaa gccacccggc cgctgaaagc agacgtctag
     7801 gcctgtctct tctttgagcg tctcggcgaa gcctgcccag gcgttggacg agcgcaccgt
     7861 ccagccggca tagggcgcga gtcccag
//
LOCUS       DASWGA010000458         7150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2462165, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000458 DASWGA010000000
VERSION     DASWGA010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7150
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2462165"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..676)
                     /locus_tag="VF991_10965"
     CDS             complement(<1..676)
                     /locus_tag="VF991_10965"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9557009.1"
                     /translation="MTTPEIIFGLAVFLLAGTVKGLVGLGLPTITIALTSLVLPLPEA
                     IALIALPTVITNVWQAAVGGRFWIILRRQAPLIVPLVVGLYLTMWLVGQKGPNWAFLV
                     LAAVLIVYSGLGLLRIRLHIHADLEKPLAPVIGVISGFVAGVVGVPVVPLMPYLQGLD
                     IKPSELVQTLGVVLCATSLTLTASLINFGLLDGRRAIVSAAAVVPALAGMWMGQQIRL
                     RLSIEQF"
     gene            complement(803..2335)
                     /gene="ubiB"
                     /locus_tag="VF991_10970"
     CDS             complement(803..2335)
                     /gene="ubiB"
                     /locus_tag="VF991_10970"
                     /inference="COORDINATES: protein motif:HMM:TIGR01982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenylphenol 6-hydroxylase"
                     /protein_id="HEX9557010.1"
                     /translation="MLRALRNTWRLLRLALSLARHDALFPLETIGIAPPLIVWARLFA
                     RRRDARRPGERLTAALQEMGPSFIKLGQALSTRADVLSETVAADLARLQDHLPPFSGL
                     EARRTIEAELGQPVTALFASFDDVPVAAASIAQVHFAVTTDGRDVAVKVLRPGIERAF
                     ERDLDLFYWMAELVERTQPRFRRLKPVDSVSAFADVVRVEMDLRMEAAAAEELGGNFA
                     DDPGYRTPAIDWDRTAQRVLTLERVDGIPIGDRDAIIAAGHDPDIVMKKCAEAFFYQV
                     FRDGFFHADVHGGNAFVDRAGHIVPVDFGIMGRIDEDTRGYLAELLVAFLRRDYRAVA
                     DVQFRAGYVPSDQSREMFAQACRSIGEPIFGKPSHEISIARLLAQMLRVTEQFEMTAQ
                     PQLLLLQKTMLMAEGMGTRLNPHVNIWELARPLIEEWMQSHFGPRATVGRALEDFAQG
                     LRRLPRLIDSLHVVAEHERRKAEAEAKQPPPATVRPWPRIGFAEVIAVLALIAAIVAW
                     WH"
     gene            complement(2409..3131)
                     /gene="ubiE"
                     /locus_tag="VF991_10975"
     CDS             complement(2409..3131)
                     /gene="ubiE"
                     /locus_tag="VF991_10975"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052624 - 2-phytyl-1,4-naphthoquinone
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0042372 - phylloquinone biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEX9557011.1"
                     /translation="MPAPEKAGLVRRVFDSVAPRYDLMNDLMSAGVHRLWKNALVDVL
                     NPRPGERLLDVAGGTGDIAFRILRRQMERGGDRPDVTVCDINPAMLAVGRDRAADRGL
                     LKGLTWTTGDAENLPFPDRSFDGYTIAFGLRNVTDIDKALGEAHRVLKPGGRFYCLEF
                     SKVTSAPIGRAYDAYSSRALPLLGRVVASDAQSYRYLYESIRRFPPQRELAQRLRGAG
                     FENVTWRNMTLGVVALHGGWRI"
     gene            3222..3956
                     /locus_tag="VF991_10980"
     CDS             3222..3956
                     /locus_tag="VF991_10980"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9557012.1"
                     /translation="MLLKDRVILITNVEKFAGHGTTRVALGQGATVLAHDPSFEAPSA
                     RRKYEAEFPGAHALSAVEPATLVELALKRHGHIDALVNNDAYPALRAPLSEARLEDYR
                     AALEAMAVAPFRLVQLVAPAMRKRKSGRIVFVSSAAPLRGIANYAPYVSARAAANGLV
                     SSLAKELGRDGITVNAVGSNYVENPDYFPPALLANKEAMAKMTAQIPLGRLGTSDELG
                     AAVCFLCSDSAGFITGHLLPHAGGWA"
     gene            4098..5036
                     /locus_tag="VF991_10985"
     CDS             4098..5036
                     /locus_tag="VF991_10985"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557013.1"
                     /translation="MGRQIVHRLLVSFPALLGVLFLCFCLLQVVPADPAMIIAGPDAR
                     AETIAAIRNELGLDRPIPIQFAEYIGRVLRGDLGRSIISNKMVSEELALTIGPTVELM
                     LGAMLIAVPLGLALGTLAAVKRGTTLDRLIMAISVAGVSMPVFFIGLILIQYVGFKWA
                     LLPFTGRTGPVWDGGLPSLILPAVTLGVVLIGPIARLTRTAVLEVLGADFVRTARAKG
                     LRETVVIVHHALRNALIPVVTLIGLQAAFLLGGAVVTETMFSWPGVGRLAVGAIVSSD
                     FPTAQGAIMILAIAFLTINLVVDVLYVYLDPRLQRS"
     gene            5033..5917
                     /locus_tag="VF991_10990"
     CDS             5033..5917
                     /locus_tag="VF991_10990"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557014.1"
                     /translation="MSVEVLGPSAHAEEPRVLGRAGVLRRLARDKVAVLAALALIVIG
                     LAAVFAPVVAPYDPYLTDLTKVMRPPGGEHWFRTDNTGRDILSRVIFGTRNTLMLGLI
                     GVLIGGLLGGVLGIVAAYYPGADGWIMRLVDIMLAFPAILIGLAVAAVAGAGLGAVVI
                     ALVVATVPDVARVARGAAVGVMGQEFMEAGRAVGVSDRTLIWRYLTLNCISTIFVFLT
                     LRFGQIILVGSALGFLGMGAQPPTAELGMMAAQGRDFLFMAPHIATIPSCAIFVIVLA
                     ANLLGDALRDVLDPRLQT"
     gene            5959..>7150
                     /locus_tag="VF991_10995"
     CDS             5959..>7150
                     /locus_tag="VF991_10995"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557015.1"
                     /translation="MPAGAQTLNMMRSIDAPHYDAQRTTWAPTADIVNMIQDTLVALD
                     WDGKTPIPYLAKSWTISPDGKLYVFKLRDDVSFCSGKKLTAEDVVYSFKRLKDPEMKG
                     PYAWRAGVIKEVRATDPYTVEYELAEPFSELLLQLTMFTNVIHNKESVEALGKDYGVK
                     GVDGTGPWCFVSWQPRTEIVLKRHDAYKWGPAMYQNKGPVKFEKLSIRIVPEDSSRVA
                     AMMSGAFEFTNLFPQQYTAQAKTAPMLTVQEAKPNFQLLYFGYKITRPMVADRRVREA
                     MSIAINRAEIAKGVLLGNAEPAFTIVDKDALDHNPQTAKLITEDVKRANQLLDEAGWK
                     MGSDGIREKDGMKLAPKVYFTANGNSAKVAEAIQGYLRKIGVDWRLQAWDSTIAAAKM
                     AEQDY"
BASE COUNT         1194 a         2416 c         2413 g         1127 t
ORIGIN      
        1 ggaactgctc gatcgacagg cgcaggcgga tctgctggcc catccacatg ccggcgagcg
       61 ccggcaccac cgccgccgcc gacacgatgg cgcgccgccc gtcgagcagg ccgaagttga
      121 tcagcgaggc ggtgagggta agcgaggtgg cgcacagcac gacgcccagg gtttgcacca
      181 gttcgctggg cttgatgtcg agcccctgca gataaggcat cagcggcacg acgggcacgc
      241 cgaccacgcc ggcaacaaag ccggaaatca cgccgatcac cggcgccagc ggcttttcca
      301 gatcggcgtg gatgtgcagg cgaatgcgca gcaggccgag cccgctatag acgatcagca
      361 cggcggccag caccaggaag gcccagttcg ggcccttctg gccgaccagc cacatggtga
      421 gatagagccc gaccaccagc ggcacgatca gcggcgcctg gcggcgcagg atgatccaga
      481 acctgccgcc caccgccgcc tgccagacgt tggtgatgac ggtcggcagc gcgatcaagg
      541 cgatcgcctc gggcagcggc aggaccagcg aggtgagcgc gatggtgatc gtcggcaggc
      601 ccagcccgac caaccccttg accgtccccg ccaagaggaa gacggccagg ccgaagatga
      661 tctctggcgt cgtcattgtt ttccggaccg cgggcctccg gcccgctcat ggtcttccgg
      721 accgcgagcc tctggctcgc tcagaatcat gagcgcgcaa gatgcgcgcg gtccgaatga
      781 acatgacatg acgatgcccc agctagtgcc accacgcgac gatcgcggcg atgagggcca
      841 gcacggcgat gacctcggcg aagccgatgc gcggccacgg gcgaaccgtg gcgggcggcg
      901 gctgcttggc ctcggcttcc gccttgcggc gctcgtgttc ggccacgaca tgcaaactgt
      961 cgatcaggcg cggcaggcga cgcagaccct gcgcaaagtc ctcgagagcg cggccgacgg
     1021 tggcgcgcgg gccgaaatgg ctctgcatcc actcctcgat caagggccgc gccaactccc
     1081 agatattgac gtgcgggttc agccgcgtgc ccatgccttc ggccatcagc atggtcttct
     1141 gcagcagcag gagctgcggc tgcgccgtca tctcgaactg ctcggtgacg cgcagcatct
     1201 gggcgagcag gcgggcgatg gaaatctcgt ggctcggctt gccgaagatc ggctcgccga
     1261 tcgagcggca ggcctgggcg aacatctcgc gcgactgatc ggacggcacg tagccggcgc
     1321 ggaactgcac gtcggccacg gcgcgatagt cgcgccgcag gaaggcaacc agaagctcgg
     1381 cgagatagcc gcgcgtgtcc tcgtcgatgc ggcccatgat gccgaaatcg accggcacga
     1441 tgtgcccggc gcggtcgacg aaggcattgc cgccatgcac gtcggcatgg aagaagccgt
     1501 cgcggaacac ttggtagaag aaggcttcgg cgcacttctt catgacgatg tccggatcgt
     1561 gcccggcggc gatgatggcg tcgcgatcgc cgatcgggat gccgtcgacc cgctccagcg
     1621 tcagcacgcg ctgggcggtg cggtcccagt cgatggcggg cgtgcggtag cctggatcgt
     1681 cggcgaagtt cccgcccagc tcctcggccg ccgccgcctc catgcgcagg tccatctcga
     1741 cccgcacgac gtcggcgaag gcgctcaccg aatcgaccgg cttcagccgg cggaagcgcg
     1801 gctgggtgcg ctcgaccagc tcggccatcc agtagaacag gtcgaggtcg cgttcgaagg
     1861 ctctctcgat gccgggccgc agcactttga ccgcgacgtc gcggccatcg gtggtgacgg
     1921 cgaaatgcac ctgggcgatc gaggcggcgg cgaccggtac gtcatcgaag ctcgcgaaca
     1981 atgctgtcac cggctggccg agctcggctt cgatggtgcg ccgggcttcg aggccggaaa
     2041 agggcggcag gtggtcctgc aggcgggcga ggtcggccgc gaccgtctcg cttagtacgt
     2101 cggcgcgcgt cgacagcgcc tggccgagct tgatgaagga cggccccatc tcctgcaacg
     2161 ccgcagtcag ccgctcgccc ggccggcggg catcgcggcg ccgggcgaac aggcgcgccc
     2221 agacgatcag cggcggcgcg atgccgatcg tctccagcgg aaacagcgca tcgtgccgcg
     2281 cgaggctcag cgccaggcgc agcaggcgcc acgtattgcg aagtgcgcgc agcatcagcg
     2341 gagcgcggac ctccaggtcc gctcatcatc atgatgcgga cctggaggtc cgcgctccaa
     2401 aagatgcgtc atatccgcca accgccgtgc agcgccacga cacccagggt catgttgcgc
     2461 caggtgacgt tttcgaagcc tgccccgcgc aggcgctggg caagctcgcg ctggggcggg
     2521 aaacgccgga tgctttcgta aagatagcgg taggactggg cgtcgctggc gacaacgcga
     2581 cccagcaagg gcagggcgcg gctggaatag gcatcgtagg cgcggccgat cggcgccgat
     2641 gtcaccttgc tgaactccag gcaatagaag cggccgccgg gcttcagcac gcgatgcgcc
     2701 tcacccagcg ccttgtcgat atcggtgacg ttgcgcaagc cgaaggcgat ggtgtagccg
     2761 tcgaacgaac ggtcgggaaa cggcaggttc tcggcatcgc ccgtcgtcca ggtgagccct
     2821 ttcagcagcc cgcgatcggc ggcacggtcg cggccgaccg ccagcatcgc ggggttgatg
     2881 tcgcagaccg ttacatcggg ccgatcgcca ccccgctcca tttggcgccg caggatgcgg
     2941 aaggcgatgt cgcccgtgcc gcccgccacg tccagtagcc tttcgcccgg tcgcgggttc
     3001 agcacgtcca ccagcgcatt cttccagaga cgatggacgc cagccgacat caggtcgttc
     3061 atcaggtcat agcgcggcgc cacgctgtcg aagacccggc ggacaagacc ggccttttcg
     3121 ggcgccggca cgtcgcggtc gccgaaggac gcctgcccgg atggggcgga cgcgctagga
     3181 tcggacgggt ctgtcatggg ccgcaaccta gaggaatcgc catgctgctg aaagaccggg
     3241 tgatcctgat caccaatgtc gagaagttcg ccggtcacgg cacgacacgg gtggcgctcg
     3301 gccagggcgc cacggtgctg gcccacgatc cctcgttcga ggcgccgagt gcccggcgca
     3361 agtacgaagc cgagttcccg ggagcgcacg ccctgtcggc ggtcgagccc gcgaccctgg
     3421 tcgagctcgc gctcaagcgc cacgggcaca tcgacgcgct ggtcaacaac gatgcctatc
     3481 ccgccttgcg cgcgccgctt tccgaggcgc gcctggaaga ctaccgcgcc gcgctcgagg
     3541 ccatggcggt ggcgccgttc cggctggtgc agctcgtggc gccggcgatg cgcaagcgca
     3601 agtcgggccg catcgtgttc gtgtcgtcgg cggcgccgct gcgcggcatc gccaactacg
     3661 caccctacgt gtcggcgcgg gcggcggcca acggacttgt ctcctcgctc gccaaggagc
     3721 tgggacgcga cggcatcacg gtgaacgcgg tcggctcgaa ctatgtcgag aaccccgact
     3781 actttccgcc ggcactgctc gccaacaagg aggcgatggc caagatgacg gcgcagatcc
     3841 cgcttggccg gctcggcaca tcggacgagc tgggcgcagc ggtctgcttc ctctgctccg
     3901 actccgccgg cttcatcacc ggtcacttgc ttccgcatgc gggcggatgg gcgtgacgcg
     3961 gcggcgcgag catgccacta tgccgacaat taaacgtcgc gcacggttga ccgaagcgcg
     4021 gctaccggga ggcaacgtca agacacgccg atagatccgg cgcgtgcgcc tttggtcgat
     4081 tcggtccgag gacggccatg ggaaggcaga tcgtccaccg cctgctggtc tcgttccccg
     4141 ccttgctcgg ggttctcttt ctttgcttct gcctcctgca ggtggtgccg gccgatccgg
     4201 ccatgatcat cgccggaccg gacgccaggg ccgagaccat cgccgccatc cgcaacgaac
     4261 tcgggctcga tcggccgatt cccatccagt tcgccgaata tatcggccgc gtcctgcgcg
     4321 gcgatctcgg gcgctcgatc atctccaaca agatggtgag cgaggaactg gcactcacca
     4381 tcgggccgac cgtcgagctg atgctgggcg ccatgctgat cgccgtgccg ctcgggctgg
     4441 cgctgggcac gctggcggca gtcaagcgcg gcaccacgct cgaccgcctg atcatggcca
     4501 tctcggtcgc gggcgtttcc atgccggtgt tcttcatcgg cctgatcctg atccagtatg
     4561 tcggcttcaa gtgggccctg ctgcccttca ccggccgcac cggcccggta tgggacggcg
     4621 gcctgccgag cctgatcctg ccggcggtga ccctgggcgt ggtgctgatt ggcccgatcg
     4681 cgcggctgac gcgcaccgcg gtgctcgagg tgctgggcgc ggatttcgtg cgcacggcgc
     4741 gcgccaaggg cctgcgcgag acggtggtga tcgtccacca cgcgctgcgc aatgcgctga
     4801 tccccgtggt caccctgatc ggcctgcagg cggcgttcct gctgggcggc gcggtcgtga
     4861 ccgagacgat gttctcgtgg cccggtgtcg gccggctcgc cgtcggcgcc atcgtgtcga
     4921 gcgatttccc gacggcgcaa ggcgccatca tgatcctcgc cattgccttc ctgaccatca
     4981 acctcgtggt cgacgtgctg tacgtctatc tcgatcccag actgcagcgg tcatgagcgt
     5041 cgaggtttta ggcccgtccg cccatgccga ggagccgcgc gtgctcggcc gcgcgggcgt
     5101 gctgcgacgg ctggcgcgcg acaaggtggc ggtgctcgcc gccctggccc tgatcgtgat
     5161 cgggctcgcc gccgtcttcg cgccggtggt ggcgccctac gacccctatc tcaccgacct
     5221 caccaaggtg atgcggccgc caggcggcga gcattggttc cgcaccgaca acaccggccg
     5281 cgacatcctg agccgcgtca tcttcggcac acgcaacacg ctgatgctgg gcctgatcgg
     5341 cgtgctgatc ggcggcctgc tgggcggcgt gctcggcatc gtggcggcct actatcccgg
     5401 cgccgacggc tggatcatgc ggctggtcga catcatgctg gcctttccgg cgatcctgat
     5461 cgggcttgcc gtggcggcgg tggcgggcgc gggactgggc gccgtggtga tcgcgctggt
     5521 cgtggcgacg gtgcccgacg tggcacgggt ggcgcgcggc gcggcggtcg gcgtcatggg
     5581 ccaggagttc atggaggccg gccgcgccgt cggcgtgtcg gaccgtacgc tgatctggcg
     5641 ctacctgacg ctgaactgca tctccaccat cttcgtgttc ctgaccctgc gcttcggcca
     5701 gatcatcctg gtcggttcgg cactgggctt cctgggcatg ggcgcgcaac cgccgacggc
     5761 cgagctcggc atgatggccg cgcagggccg cgactttctc ttcatggcgc cgcacatcgc
     5821 gacgatccca agctgcgcga tcttcgtcat cgtgctggcc gccaaccttc tgggcgacgc
     5881 tttgcgcgac gtcctcgatc cgaggctgca gacatgatca gatccgctct cagtgcagcg
     5941 tttgcgttga gtatcgcaat gcccgccggc gcgcagacgc tcaacatgat gaggtcgatc
     6001 gacgcgccgc actacgatgc gcagcgcaca acctgggcgc cgaccgccga catcgtcaac
     6061 atgatccagg acacgttggt ggcgctcgac tgggacggca aaactcccat cccctatctc
     6121 gccaagtcgt ggaccatcag ccccgacggc aagctctacg tcttcaagct gcgcgacgac
     6181 gtgagcttct gcagcggcaa gaagttgacg gccgaggacg tggtctacag cttcaagcgg
     6241 ctgaaggacc ccgagatgaa ggggccctac gcctggcgcg ccggcgtcat caaggaagtg
     6301 cgcgccaccg atccctacac cgtcgagtac gagctcgccg agcccttctc cgagctcctg
     6361 ctgcagctca ccatgttcac caacgtgatc cacaacaagg aaagcgtgga ggcgctcggc
     6421 aaagactacg gcgtcaaggg cgtcgacggc accgggccgt ggtgtttcgt ctcctggcag
     6481 ccgcgcaccg agatcgtgct caagcgccac gacgcctaca aatggggccc cgcgatgtac
     6541 cagaacaagg gcccggtgaa attcgagaag ctcagcataa gaattgtgcc ggaggattcg
     6601 agccgcgtgg cggcgatgat gtcgggcgcc ttcgagttca ctaacctctt ccctcagcag
     6661 tacacagccc aggcgaagac cgcgcccatg ctgaccgtgc aggaggccaa gccgaacttc
     6721 cagctcctgt atttcggcta caagatcact cggcccatgg tggccgaccg gcgcgtccgc
     6781 gaggccatga gtattgccat caaccgcgcc gagatcgcca agggcgtgct gctgggcaac
     6841 gccgagcccg ctttcaccat cgtcgacaag gacgcgctcg accacaatcc gcagaccgcc
     6901 aagctgatca cggaggacgt caagcgcgcg aatcagctgc tcgacgaggc cggctggaag
     6961 atgggcagcg acggcatccg cgaaaaggac ggcatgaagc tggcccccaa ggtctacttc
     7021 accgcgaatg gcaattcggc caaggtggcc gaggccatcc agggctacct gcgcaagatc
     7081 ggcgtcgatt ggcggctgca ggcctgggat tcgaccatcg ccgccgccaa gatggcggag
     7141 caggattacg
//
LOCUS       DASWGA010000459         1540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_814029, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000459 DASWGA010000000
VERSION     DASWGA010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814029"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VF991_11000"
     CDS             complement(<1..240)
                     /locus_tag="VF991_11000"
                     /inference="COORDINATES: protein motif:HMM:NF024104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9557016.1"
                     /translation="MSRLDSFIARMQAQRDCLNFLKPAVHALPGPILEVGLGNGRTYD
                     HLRDLFPGREIYVFERKVAAHPECIPPDDRLFLGEA"
     gene            complement(250..705)
                     /locus_tag="VF991_11005"
     CDS             complement(250..705)
                     /locus_tag="VF991_11005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007691876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX9557017.1"
                     /translation="MNLNEEVELLKGVPIFSKVEPAKLKLLAFTSERMNFAAGQEVCH
                     QGDPGDTMYVILGGTADVLIDNEGGQITVAEMKKNSFFGEIAILCDVPRTATIKARDP
                     LSTLKISKDMFYRLVAEFPQMAVEVMRELAHRLEDTNQKLQAANSNKAA"
     gene            complement(725..>1540)
                     /locus_tag="VF991_11010"
     CDS             complement(725..>1540)
                     /locus_tag="VF991_11010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557018.1"
                     /translation="MGLTIAETMVELFSGLSPDNPLFEQYSFISADELPNVRLLLQRL
                     GGKGIEAVPDADRPRLMTLPFRYIEARHRLGLIDATMEERLLAARRAFAAGLPPGRRS
                     AVEFYDFGRYNSAATLQDNILFGRLVYGQAQAEQRIGTLISEVLDELRLRDSVIEVGL
                     EYNVGVAGKRLPATQRQKLGIARALIKRPQLLIVNEAVASFDGRTQDRIRDNILRAAK
                     SEGRGVVWIANRPAQAEPFEQIVVMQGGRIAAQGAPADLAARGGLYAELMASA"
BASE COUNT          249 a          490 c          519 g          282 t
ORIGIN      
        1 cgcctcgccc aggaacagcc ggtcgtcggg cgggatgcac tccggatggg ccgcaacctt
       61 gcgctcgaac acatagatct cgcggccggg aaagaggtcg cgcagatggt cgtaggtgcg
      121 cccgttgccc aggcccacct cgaggatcgg cccgggcagg gcgtggacgg ccggcttcag
      181 aaagttcagg cagtcgcgct gcgcctgcat gcgcgcgatg aagctgtcga gccgactcat
      241 gacggatgat caggccgcct tgttcgaatt cgccgcttgc agcttctggt tggtgtcctc
      301 caggcgatgg gccagctcgc gcatgacctc gacggccatc tgcgggaact ccgcgaccag
      361 gcggtagaac atgtccttgg agatcttgag cgtgctgagc ggatcgcgcg ccttgatggt
      421 ggcggtgcgc ggtacatcac aaaggatggc gatttcgccg aagaagctgt ttttcttcat
      481 ctctgccacg gtgatctggc cgccctcgtt gtcgatcagc acgtccgccg tgccccccag
      541 gatgacgtac atcgtgtcgc ccggatcgcc ttgatggcag acctcctgac cggcggcgaa
      601 gttcatccgc tcgctggtga aggccaggag tttgagcttg gccggctcga ccttggaaaa
      661 gatcggcacg cccttgagaa gttcgacttc ctcgttgagg ttcatcgtat cctcctgaaa
      721 ttcctcaagc cgacgccatc aattcggcgt agagcccacc gcgcgccgcc aggtcggccg
      781 gcgcgccctg agcggcgatc ctgccaccct gcataacgac gatctgttcg aacggttcgg
      841 cctgcgccgg ccggttggcg atccagacca cgcctcgtcc ttcgctcttc gccgcgcgca
      901 ggatgttgtc gcgaatgcga tcctgcgtgc ggccgtcgaa cgaagcgacc gcctcgttca
      961 cgatcaggag ctgggggcgc ttgatgaggg cgcgcgcgat gccgagcttc tggcgctggg
     1021 tggccggcag gcgcttgccg gcaacgccga cattgtactc caatccgacc tcgatcaccg
     1081 aatcgcgcag cctgagctcg tccagcacct cggagatcag ggtgccaatg cgctgttccg
     1141 cctgggcctg cccgtaaacc agacggccga acaggatgtt gtcctgcagg gtggcggcgc
     1201 tgttgtagcg cccgaagtcg tagaattcga cggcgctgcg ccttccgggc ggcagcccag
     1261 cggcgaaggc gcgccgtgcc gccagcaggc gttcttccat cgtggcgtcg atcaggccga
     1321 ggcggtggcg ggcctcgatg taacggaagg gcagggtcat caggcgcggc cggtcggcgt
     1381 cgggcacggc ctcgatgccc ttgccaccca ggcgttgcag cagcaggcgg acgttgggca
     1441 gctcgtcggc ggagatgaag ctgtattgct cgaacagcgg gttgtcgggc gacaggcccg
     1501 agaacagctc gaccatggtc tcggcgatgg tgagtcccat
//
LOCUS       DASWGA010000460         2874 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_55359, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000460 DASWGA010000000
VERSION     DASWGA010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2874
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55359"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VF991_11015"
     CDS             complement(<1..265)
                     /locus_tag="VF991_11015"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9557019.1"
                     /translation="MSPDTVLVPQPTLDDFPDFVSIPVRVARHAKAHPEKIAVMCEGK
                     TRTWRAFDKRIDKIARSLANMGVGRGDKIAILATNSIAYLETFM"
     gene            complement(277..684)
                     /locus_tag="VF991_11020"
     CDS             complement(277..684)
                     /locus_tag="VF991_11020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX9557020.1"
                     /translation="MPLKIKKTVRQMVDEANGQIETLALADAMKMVGQPGVTFIDIRD
                     PRELWRDGTIPGAINVTRGMLEMWIDPESPYAKDYFQTGNKFVFFCAGAWRSALATKT
                     AQDMGLSPVAHFEGGFGAWKKAGGPVEKVEPKK"
     gene            complement(739..1155)
                     /locus_tag="VF991_11025"
     CDS             complement(739..1155)
                     /locus_tag="VF991_11025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3775 domain-containing protein"
                     /protein_id="HEX9557021.1"
                     /translation="MANPTLSISSESVCFIIVKAREYDVQDVETDPDSGSNATDDNMT
                     SVLEAHPDDPTLAELRAFIGALSEEEQIDLVTLMWLGRGDGTLDDWIDLHDEAERQHN
                     NRTAAYLLGEPLLGDHLEEALSQLGFSCEEFEIGRL"
     gene            complement(1239..>2874)
                     /locus_tag="VF991_11030"
     CDS             complement(1239..>2874)
                     /locus_tag="VF991_11030"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEX9557022.1"
                     /translation="SGANTIESRVKLAGQEVPFGTDMLFRSTGTVPFIFHVEICEDIW
                     VPVPPSSHAALAGAEVLINLSASNITIGKAEARRLLCGSQSMRGIAAYAYSASGPGES
                     TTDLAWDGHAAIYECGDQLAESSRFEKDSTVVRADVDLGRIRQERMRNNGFADCALQE
                     ADKVARLRKVDFVLDAPRGSVALDRAVERFPYVPSDPAKLRDNCYEAYNIQIQGLAQR
                     LQSSRTGRAIIGVSGGLDSTQALIVTCRAMDQLGQPRKNVLAYTLPGFGTSDKTHKNA
                     WRLMKALGVTAAEIDIKPAALQMLGDIGHPFAKGKKVYDVTFENVQAGLRTDYLFRLA
                     NQNGGMVVGTGDLSELGLGWCTYGVGDHMSHYNPNGSVSKTLIQHLIRFVAASGDVDK
                     DTAAVLHDILDTEISPELIPAGDGGVMQLTEQSVGPYALQDFNLFYLTRLGFRPSKIA
                     FLAWNAWHDVEKGTWPANLPAGMRRAYTLAEIRRWLELFLRRFFTNQFKRSALPNGPK
                     ISSGGSLSPRGDWRAPSDGSPDVWLAELSAVPETRK"
BASE COUNT          462 a          904 c          975 g          533 t
ORIGIN      
        1 ccatgaaagt ctcgagatat gcgatcgaat tggtggccag gatggcgatc ttgtcgccgc
       61 ggccgacgcc catgttcgca agcgagcggg cgatcttgtc gatgcgcttg tcgaacgccc
      121 gccaggtgcg cgtcttgccc tcgcacatga ccgcgatttt ttccggatgg gccttggcgt
      181 ggcgcgccac gcgcaccgga atcgagacga agtcggggaa gtcgtcgagc gtcggctgag
      241 gcaccaaaac ggtgtcggga ctcatcgcgg ctgtccctat ttcttcggct cgaccttctc
      301 gaccgggcct ccggccttct tccaggcacc gaaaccaccc tcgaaatgcg ccaccggtga
      361 gagacccatg tcctgcgctg tcttggtggc aagggcggac cgccaggcgc cggcgcagaa
      421 gaacacgaac ttgttgccgg tctggaaata gtccttggcg tagggactct cgggatcgat
      481 ccacatttcg agcatgccgc gcgtcacgtt gatcgcgccg gggatcgtgc cgtcgcgcca
      541 cagttcgcgt ggatcgcgga tgtcgatgaa cgtgaccccg ggctggccga ccatcttcat
      601 ggcgtcggca agcgccagcg tttcgatctg gccgttggcc tcgtcgacca tctgcctgac
      661 ggtcttcttg atcttgagcg gcatcgcgtt cctccgatgg ctatttgtac ggtcagacgg
      721 cgaaacgcga aagcccgctc acaagcggcc gatttcgaat tcctcgcacg aaaatccaag
      781 ctgcgacaag gcttcctcga ggtgatctcc cagcagcggt tcgccgagaa gataggccgc
      841 agtgcggttg ttgtgctggc gctcggcctc atcatgcagg tcgatccagt cgtccagagt
      901 cccgtcgccg cggccgagcc acatcagggt gacgaggtcg atctgctcct cctcgctcaa
      961 agcgccgatg aaggcccgca gttccgcaag ggtggggtcg tctggatgcg cctcgagcac
     1021 cgacgtcatg ttgtcgtcgg tggcgttcga tcccgagtcg ggatcggtct cgacgtcctg
     1081 gacgtcgtac tcgcgggcct tgacgatgat gaagcaaaca ctttccgatg aaatgctgag
     1141 cgtcgggttg gccatcgcct tcctccctat cctccgttct tcggcggtcg ggatatgggg
     1201 atgccgtgtg gcggcgttca acggttcgct gccgccattt atttacgggt ttcgggaacc
     1261 gcgctgagtt cggccagcca gacgtccgga ctgccgtccg agggcgcccg ccagtcgcca
     1321 cgcggcgaca gcgagccgcc cgacgagatc ttgggcccgt tgggcagcgc cgaccgcttg
     1381 aactggttgg tgaagaagcg gcgcaggaac aattccagcc agcgccggat ctcggccagc
     1441 gtataggcgc gccgcatgcc ggccggcagg ttggccggcc aggttccctt ctcgacgtcg
     1501 tgccaggcgt tccaggcgag gaaggcgatc ttggagggcc gaaagcccag ccgcgtcagg
     1561 tagaagaggt tgaaatcctg cagcgcgtag gggccgaccg actgctcggt caattgcatg
     1621 acgccgccgt cgccggccgg gatcagttcc ggcgagatct cggtgtcgag gatgtcgtgc
     1681 aggacggcgg ccgtgtcctt gtcgacgtcg cccgaggcgg cgacgaagcg gatcaggtgc
     1741 tggatcagcg tcttggacac cgagccgttg ggattgtagt gcgacatgtg atcgccgacg
     1801 ccgtaggtgc accagcccag cccgagctcg gagaggtcgc cggtgccgac gaccatgccg
     1861 ccgttctggt tggccaggcg gaacaggtag tcggtgcgca ggccggcctg cacgttctcg
     1921 aaggtgacgt cgtagacctt cttgcccttg gcgaagggat ggccgatgtc gcccagcatc
     1981 tggagggcgg ccggcttgat gtcgatctcg gccgcggtca cgcccagcgc cttcatcagt
     2041 cgccaggcgt tcttgtgcgt cttgtccgac gtgccgaagc ccggcagcgt gtaggccagc
     2101 acgttcttgc gcggctggcc gagctggtcc atcgcccgac aggtcacgat cagcgcctgg
     2161 gtcgaatcga ggccgcccga cacgccgatg atcgcccgcc cggtgcggct cgactgcagg
     2221 cgttgcgcca ggccctggat ctggatgttg taggcctcgt agcaattgtc gcgcagcttg
     2281 gccggatcgg agggcacata aggaaagcgc tcgaccgcgc ggtcgagggc cacgctgccg
     2341 cgcggtgcgt cgagcacgaa gtcgaccttg cgcaagcgcg cgaccttgtc ggcctcctgc
     2401 agcgcgcagt cggcgaaacc gttgttgcgc atccgctctt ggcggatgcg gccgagatcg
     2461 acgtcggcgc gcaccacggt cgagtccttc tcgaagcgcg acgattcggc gagctggtcg
     2521 ccgcattcgt agatcgcggc gtggccgtcc caggcgagat cggtcgtcga ttcgccgggg
     2581 ccggaggccg agtaggcgta ggccgcgatg ccgcgcatcg actggctgcc gcacagcaaa
     2641 cgccgcgcct cggccttgcc gatggtgatg ttgctggccg agaggtttat aagcacctcg
     2701 gcccccgcca aggcggcgtg gctcgagggc ggtaccggca cccagatgtc ctcgcagatc
     2761 tcgacatgga agataaacgg caccgtgccg gtcgagcgga acagcatgtc ggtgccgaac
     2821 ggcacctcct ggccggcgag cttgacgcgg ctttcaatgg tgttggcgcc cgag
//
LOCUS       DASWGA010000461         3186 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_181349, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000461 DASWGA010000000
VERSION     DASWGA010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181349"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(344..1414)
                     /locus_tag="VF991_11035"
     CDS             complement(344..1414)
                     /locus_tag="VF991_11035"
                     /inference="COORDINATES: protein motif:HMM:NF023431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3500 domain-containing protein"
                     /protein_id="HEX9557023.1"
                     /translation="MPHDGWHPHDHRENFHGHRSPTRRFILAAATFLPFGGASAQTVD
                     AAQRIAEAATRFLGLLDAAQRMRVLIAFDSDNRLDWHYIPRSRAGLTLGEIRSDQAEA
                     ARALFATVLNEQGLKLLDGVRLVESVLREQQGSFRDPNRYFVSIFGTPGHFPWGWRFE
                     GHHLSLNVALPAAGHVAVTPFFAGAHPATVHDGPHKGFRLLGASEDLARQIMSGLSDS
                     QRRAALIADRSFGDIVASPQREKDLGQPRGLELSAMSGPARAQVEALTDQFLGTLAPD
                     LLAAQKQRVREQGLETFRFAWAGSLTLGEAYYFRVHGPVTLIEHDNTQNNSNHIHSVW
                     RDLAADFGHDALGEHYRQQRHR"
     gene            complement(1425..2063)
                     /locus_tag="VF991_11040"
     CDS             complement(1425..2063)
                     /locus_tag="VF991_11040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEX9557024.1"
                     /translation="MSNIVVARRSLMLGGAAVALMPALAFAASPDVGKPAPLFTSVDS
                     NGKTWSLADLKGKIVVIETTNHDCPYVRKHYTAKNMQTQQREAAAKGVVWLTSASSAT
                     GEEGYVTAPQANELTKKRDAAPAAVLLDPQSKIARAYGATVTPHMYIIDASGILVYKG
                     GIDSIPSSDIADIPKAKQYVRIGLGEVLAGKPVSDSSTRPYGCSLKYPRTST"
     gene            complement(2073..>3186)
                     /locus_tag="VF991_11045"
     CDS             complement(2073..>3186)
                     /locus_tag="VF991_11045"
                     /inference="COORDINATES: protein motif:HMM:NF025268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEX9557025.1"
                     /translation="GQGRREMRRDGLAYTAGVLVSFAVMAAIVVAIRASVGEVSWGFQ
                     FQSPVFSLLIAYLFFVVGLNLSGVYEIGGRFAGVGQGLAARGGTVGSFFTGALAVIVA
                     TPCTAPFMAAALGFALSQPAPQTVAVLLAVGLGLALPYLLLSITPALQRLMPRPGPWM
                     DRLRQFLAFPMYASAVWMIWVLTQQTGADGVIYALGGMILIAFAVWLLRIGSGASPAT
                     WLRRGLAAVAVLLAFAAALKLEDGPATAASASGGPSGVNFDGWERFSRDRLNQAVAAG
                     KPVFVDFTAAWCITCLVNERVALETAATRHAFEQAGVVKLKGDWTNRDAEITSLLKDL
                     GRAGVPLYLFWAPGAARPKILPQVLTEAMILSELSR"
BASE COUNT          560 a         1028 c         1110 g          488 t
ORIGIN      
        1 gcgcgccggc gaggatggcc gataccggcc gcgccgtgcg cccagcacgg tgcgcagcga
       61 gttcgtggtc tgggctgcga ccgtgaggtt gagcgactgc gcgccgaact cgctgaagcc
      121 gttctaggtg ccggtatagc ctcccctggc agctggcaga tctgcgctat ggctgcgtcc
      181 aactcctcct tggaccaatc agccgcagcc aggacgacac gctggccgct gcaggcatcc
      241 ctgatctcga tcgagtacag gcgcttcttc ggcataacgg tccaacgtcc tcgcgagaaa
      301 aggcgttgct ctgcaatgcc gcacatcagg ttagtactat gtcctaacga tgccgctgct
      361 ggcgatagtg ctcgccgagc gcatcgtgcc cgaaatcggc ggccagatcg cgccacaccg
      421 agtggatgtg gttgctgttg ttctgggtgt tgtcgtgctc gatcagcgtg accggcccgt
      481 gcacgcggaa gtaataggcc tcgcccagtg tcagcgagcc ggcccaggcg aagcggaagg
      541 tttccagccc ctgttctctc acccgctgct tctgggcggc caaaagatcg ggggcgaggg
      601 tgccgagaaa ttggtccgtc agcgcttcga cctgagcgcg cgccgggccg ctcatggcac
      661 tgagctccag gccacgcggc tggccgagat ccttctcgcg ttgcgggctc gccacgatgt
      721 cgccgaacga gcggtcggcg atcagggcgg cgcggcgctg gctgtcggaa aggccgctca
      781 tgatctggcg ggcgaggtct tcggaagcgc ctaaaagcct gaatcccttg tgcgggccgt
      841 cgtgcaccgt ggcgggatgg gcaccggcaa agaacggcgt caccgcgaca tggccagcag
      901 cgggcaaggc gacgttcagc gacaagtgat ggccttcgaa gcgccagccc cagggaaaat
      961 gtcccggcgt gccgaagatc gagacgaagt agcggttggg atcgcggaag ctgccctgct
     1021 gctcgcgcag cacgctttcg acgagacgca caccgtcgag aagctttagg ccttgctcgt
     1081 tcagcacggt ggcgaacagt gcccgcgccg cttcggcctg gtcggatctg atctcgccca
     1141 aggtgagacc ggcgcggctg cgcgggatgt aatgccagtc caggcggttg tcggagtcga
     1201 aggcgatcag cacccgcatg cgctgggcgg cgtcgagcag gccgaggaag cgggtggccg
     1261 cctcggcgat gcgctgggcg gcatcgacgg tctgggcgct ggcaccgccg aacggcagga
     1321 atgtcgctgc cgccagtatg aagcgccgcg tcggcgagcg gtgcccgtgg aaattctcgc
     1381 ggtgatcgtg cggatgccag ccgtcgtgcg gcatggcgcg ccgctcaagt cgatgtgcgc
     1441 ggatatttca gtgagcagcc gtagggccgg gtcgaggaat cgctcaccgg cttgccggcc
     1501 agcacttcgc ccaagccgat gcggacatac tgcttggcct tggggatgtc ggcgatgtcg
     1561 gatgagggga tggagtcgat gccgcccttg tagaccagga tgcctgacgc atcgatgatg
     1621 tacatgtgcg gcgtcaccgt ggcgccatag gcgcgcgcga tcttgctttg cggatcgagc
     1681 agcacggcgg caggggcggc gtcgcgcttc ttggtgagtt cgttggcttg cggggcggtg
     1741 acatagccct cttcgccggt cgccgacgag gcggaggtca gccacaccac gcccttggcg
     1801 gcggcctcac gctgctgggt ctgcatgttc ttagcggtgt aatgcttgcg cacgtagggg
     1861 caatcgtgat tcgtcgtctc gatcaccacg atcttgccct tgaggtcggc cagcgaccag
     1921 gtcttgccgt tgctgtcgac ggaggtgaac agcggcgccg gtttgccgac gtcggggctg
     1981 gcggcaaagg ccagcgccgg catcaaggcg acggccgcgc cgcccagcat caacgaccgg
     2041 cgggcaacga cgatgttcga catgttcgcc tcctaacgcg acagttctga aaggatcatg
     2101 gcctcggtga gcacctgcgg caggatcttc ggccgcgccg cgccgggcgc ccagaaaaga
     2161 tagagcggaa cgccggcgcg gcccaggtcc ttcaacaaag atgtgatctc ggcatcgcga
     2221 ttggtccagt cgcccttgag cttgaccacg cccgcctgct cgaaggcgtg gcgggtagcg
     2281 gcggtctcga gggcgacccg ttcgttcacc aggcaggtaa tgcaccaggc ggcggtgaaa
     2341 tcgacgaaca ccggcttgcc ggcagccacc gcctggttca gacgatcgcg tgaaaaccgc
     2401 tcccagccgt cgaaattgac accggacggg ccgccggacg ccgacgcggc ggtcgccggc
     2461 ccgtcctcga gcttgagcgc ggccgcgaag gccagcagca cggcgacagc ggcgaggccg
     2521 cgacgcagcc aggtggccgg cgaagcgccg ctgccgatgc gcagcagcca gacggcgaag
     2581 gcgatcagga tcatgccgcc cagcgcatag atcacgccgt cggcgccggt ctgctgtgtc
     2641 agcacccaga tcatccacac cgcagaggca tacattggga aggcgaggaa ctggcgcagc
     2701 cggtccatcc atgggccggg ccgcggcatc aggcgctgca gggccggcgt gatcgacagc
     2761 agcagatagg gcaaagcaag ccccagcccc acggccagca gaaccgccac cgtctgcggc
     2821 gcgggctggc tgagcgcaaa gcccagcgcc gcggccatga acggcgcggt gcacggcgtg
     2881 gcgacgatca ccgccagcgc accggtgaag aaggagccca ccgtgccgcc acgcgcggcc
     2941 agcccctggc cgacaccggc gaaacggccg ccgatttcgt acacgcccga caggttcagc
     3001 ccgaccacga agaagagata ggcgatcaac agcgagaaca ccggcgactg gaactggaag
     3061 ccccagctca cctcgccgac gctggcgcgg attgccacga cgatcgccgc cataacggcg
     3121 aaggaaacca gcacgcccgc ggtataggcg agcccgtcgc gtcgcatctc acggcggcct
     3181 tggccg
//
LOCUS       DASWGA010000462         6691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2082520, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000462 DASWGA010000000
VERSION     DASWGA010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6691
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2082520"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..668)
                     /locus_tag="VF991_11050"
     CDS             complement(<1..668)
                     /locus_tag="VF991_11050"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9557026.1"
                     /translation="MDTLPLVAPEQVGLSAARLDRVGKWMHRWVDSGRLAGMVTVVMR
                     RGELAFAETAGKADLERNRPMRPDSIFRIYSMTKPLTSTAIMMLYEEGRFQLDDPISK
                     FIPGFANPRVYAGGSRGKIDSVPAEREINFRDLLTHTSGLTYGFMESNPVDALYRAKD
                     GVDFQTADTSLKQVVQKLATFPLIAQPGKAWNYSVATDVSGYLVEVISGQPFQVYLKD
                     KVLNP"
     gene            743..1642
                     /locus_tag="VF991_11055"
     CDS             743..1642
                     /locus_tag="VF991_11055"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9557027.1"
                     /translation="MARLCEGRVAIVTGGARGVGREHCLMLAEHGAKVVVNDLGGDRA
                     GKGNDVGPAQQVVNEIKAKGGEAVANGDDVSDWNGAKRMIDQAVSTFGKLDAIVLNAG
                     ILRDRMLVNMTEDEWDAVIKVHLKGTFAPARHAAAYWRDQAKAKGGPVDARIITTTSV
                     SGIYGNIGQTNYGAAKAAIAAFTVIAARELGRYGITVNSISPSALTRMTEDLRQYTEE
                     DKKRRDPKWIAPVSTWLVSEQSREITGRVFQAGNGQFAAAEGWHKGPTAEQVMDPYQA
                     GKVLTELAKKARKNAGMDGMDLD"
     gene            complement(1668..2366)
                     /locus_tag="VF991_11060"
     CDS             complement(1668..2366)
                     /locus_tag="VF991_11060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lectin"
                     /protein_id="HEX9557028.1"
                     /translation="MQKKIRVGGLVAAIAVVALVGGSQAQTPPAAPPPQPPQFPNMTF
                     FVTSVGGPQGANFGGLEGADRHCQMLATKAGAGAKTWHAYLSTQAVGGATAVNAKDRI
                     GKGPWVNAKGVQIASSVEDLHSANNKIGPDTIVAETGRLIPSRLYTVNQHDILTGSQA
                     DGTAFPPDKDMTCGNWTKSGEGNAMLGHADRMGLRDDDASKSWNTSHPSRACDAASLV
                     ATGGAGLLYCFAAN"
     gene            complement(2447..3868)
                     /locus_tag="VF991_11065"
     CDS             complement(2447..3868)
                     /locus_tag="VF991_11065"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF004815.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9557029.1"
                     /translation="MSERSLTWLSAAQLSSLYRRRELSPVDTVEAMLARASALQTHLN
                     AFVLIDAAGARKAAKESEARWLKDVPLSPLDGVPTSIKDTTQVKGWPTRIGSHATDET
                     PAAESAPAVERLQAAGMVLLGKTTTPEFGWKALTDSPLQGTTRSPWNLKRSPGGSSGG
                     AAALAAAGVNPFNHGNDGGGSIRIPAAHTGLVGLKPTFGRIAQYPADAPFADVVSQGV
                     LSRTVRDTALALNAMAGPDPRDWRSLPAEPRDYTIGLEEGVRGLKLGLSLDLGHVKAD
                     AEIRALVVAAAKRFEELGALVEEVGPLIEPLQNSFEPLWLGSFAVRLRQIPTQLHGKL
                     DPGFRAAAEKGLAITLADYAKAYEAKSKLARDMALWHRKHDLLLAPVTPTSAPLVETL
                     YNSDAFPRWTKGAPYTLPFNLTGQPAASMPAGLTRAGLPVGLQIVGPACADHLVLKAM
                     RAYESASGWTWPQAKVMEALAGF"
     gene            3994..4299
                     /locus_tag="VF991_11070"
     CDS             3994..4299
                     /locus_tag="VF991_11070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557030.1"
                     /translation="MLMEEIVYYGVIAAMIVFGLYAGNRWARSMGQAVLLGLVGSALA
                     VAAFLCLIVVLAVFSPTGHDPTEVTVRLGALLLFGSALGPVSAIGGRRRAEKAARLF"
     gene            4369..5256
                     /locus_tag="VF991_11075"
     CDS             4369..5256
                     /locus_tag="VF991_11075"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9557031.1"
                     /translation="MTEVKLGAATVRRIEESYEPNFDAKMFFPDWQPGVVQQHRDWLL
                     PNHYDEPSGFLKLSVHSWLLTVGGKRILIDTCVGNHKSRPHRPKWHLMETRYLERLKE
                     AGVEPDQVDMVMCTHLHVDHVGWNTKLENGKWVPTFRNAKYVFSRADYDHYLKLDSDP
                     KTGPVNAGSFRDSVLPVVEAGLTQMVDGAAQLDENLKVEPAPGHTPGTIAIKFESRGE
                     RALFCGDILHHALQVYHPEWNSFACAEPVGARKSRRAALEHCAGSGARLMPCHFGAPF
                     TCHIDAKGSGFAPRFDAQY"
     gene            5270..5596
                     /locus_tag="VF991_11080"
     CDS             5270..5596
                     /locus_tag="VF991_11080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011650854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEX9557032.1"
                     /translation="MIYELRVYKCVPGRLPALLNRFANITLKLWDKHGIKQAGFWTTV
                     VGESSQELYYLLAWESLADREKKWNAFVVDPEWLAKRAETEKDGAIVANVSNQLLAPT
                     AFSSVK"
     gene            complement(5697..6668)
                     /locus_tag="VF991_11085"
     CDS             complement(5697..6668)
                     /locus_tag="VF991_11085"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9557033.1"
                     /translation="MLTRRAALAATIAVPFASGRAQDADFPDRPLRFVVGFPPGGPND
                     LLARIVAPGIGERLKRPVVVENRAGANGEIAAASVAKAPPDGSVFMLASNGSTTVAPA
                     LNRNLPFDVRIDFAAVAPVGINPMLLVVRNDLPANDVAELLALARARPGKLNGASAGA
                     GGATHLALELFKSMGQVDIVHVPYKGGGPAMADLMAGLVDLYFGGLSTALPHVKAGKL
                     KSLGQTSTTRSAAAPDIPTISESGLPGYEAAISYGIFLPAGASPSLVERLHAAVDATI
                     RSPDVARKFTELGADPQFATPAEFAAYVANDYAKWAKLAKEAGLKAE"
BASE COUNT         1134 a         2113 c         2341 g         1103 t
ORIGIN      
        1 ggatttagca ccttgtcctt gagatagacc tggaagggct ggcctgaaat gacttcgacc
       61 aggtagcccg acacatcggt ggcgacgcta taattccagg ccttgccggg ctgggcgatc
      121 agcgggaagg tcgcgagctt ctgcaccact tgcttgaggc tggtgtccgc ggtctggaag
      181 tcgacgccgt ccttggcgcg gtagagcgca tcgaccggat tgctctccat gaagccgtag
      241 gtcaggccgg aggtgtgggt cagcaggtcg cggaagttga tctcgcgctc ggctggcacc
      301 gaatcgatct tgccgcggct gcctccggca tagactcgcg ggttggcgaa gccgggaatg
      361 aatttcgaga tcgggtcgtc gagctgaaag cggccctctt catagagcat catgatcgcc
      421 gtcgaggtga gcggcttggt catcgagtag atgcggaaga tgctgtcggg ccgcatcggc
      481 cgattgcgct cgaggtcggc cttgccggcg gtctcggcaa aggcgagctc gccccggcgc
      541 atgaccacgg tcaccatgcc ggcgagacgg ccgctatcga cccagcggtg catccacttg
      601 cccacgcggt cgagccgcgc tgcggaaagg ccgacctgtt cgggggcgac gagtggcagc
      661 gtgtccatgg cgatcctcct cggtgagccg ctagactagc gcaggaaagc acggccagac
      721 acgccggaaa cgggagggag caatggcaag attgtgcgag ggcagggtgg cgatcgtgac
      781 cggcggcgca cgcggggtgg gccgggagca ttgcctgatg ctggctgagc atggcgccaa
      841 ggtggtggtg aacgacctgg gcggcgaccg cgccggcaag ggcaacgacg tgggccccgc
      901 ccagcaggtc gtgaacgaga tcaaggccaa gggtggcgag gcggtggcca acggcgacga
      961 cgtctccgac tggaatggcg ccaagcgcat gatcgaccag gcggtttcca ccttcggcaa
     1021 gctcgacgcg atcgtgctga acgccggcat cctgcgcgac cgcatgctgg tcaatatgac
     1081 cgaggatgag tgggacgccg tcatcaaggt gcatttgaaa ggcaccttcg cgccggcgcg
     1141 gcacgccgcc gcctactggc gcgaccaggc caaggccaag ggcggtccgg tcgatgcacg
     1201 catcatcacc acgacgtcgg tgtcgggcat ctacggcaac atcggtcaga ccaactacgg
     1261 cgcggccaag gcggcgatcg ctgccttcac cgtcatcgcc gcgcgcgaat tggggcgcta
     1321 cggcatcacc gtgaactcga tctcgccgtc ggcgctgacg cgcatgaccg aggacctgcg
     1381 ccagtacacc gaggaggaca agaagcgccg cgatcccaaa tggatcgcgc cggtgtcgac
     1441 ctggctggtg agcgagcaga gccgcgagat caccggccgc gtcttccagg ccggcaacgg
     1501 ccagttcgcc gccgccgaag gctggcacaa aggtccgacg gccgagcagg tgatggaccc
     1561 ttaccaggcc ggcaaggtcc tgaccgagct ggccaagaag gcgcgcaaga acgccggcat
     1621 ggacgggatg gacctcgact gaaggccatc cccgggttgg cggcgtctca atttgccgcg
     1681 aagcagtaga gcaggccggc gccgccggtc gccaccagag acgcagcatc gcaggcgcgc
     1741 gagggatgcg acgtgttcca cgacttcgac gcatcgtcgt cgcgcaggcc catgcggtcg
     1801 gcgtggccca gcatcgcgtt gccttcgccg ctcttggtcc agttgccgca ggtcatgtcc
     1861 ttgtccggcg ggaaggcggt gccgtccgcc tgcgagccgg tcaggatgtc gtgttggttg
     1921 accgtgtaca gccggctcgg gatcaggcgg ccggtttcgg cgacaatggt gtccggaccg
     1981 atcttgttgt tggctgagtg caggtcctcg acgctgctgg cgatctggac acccttggcg
     2041 ttgacccatg ggcccttgcc gatgcggtcc ttcgcgttga cggcggtggc accgcccacg
     2101 gcctgggtgc tgagataggc gtgccaggtc ttggctccgg cacccgcctt ggtggccagc
     2161 atctggcaat ggcgatcggc gccttcgagg ccgccgaaat tggcgccctg cggaccaccg
     2221 acgctggtga cgaagaaggt catgttggga aactgcggcg gttgaggtgg cggtgccgcc
     2281 ggcggcgtct gggcctgcga gcctccgacg agagcgacca ccgcgattgc tgcgacaagc
     2341 ccgcctacgc gaattttctt ttgcatgtcc atctccctgc ttggagcctg cattctgggg
     2401 caggccacgg cagggcccca agtcacatcc gcgtgggatc acatgctcaa aatccggcca
     2461 gggcttccat cactttcgcc tgcggccacg tccagccgct cgcgctttcg taggcccgca
     2521 tcgccttgag cacgaggtgg tcggcgcacg cggggccgac gatctgcagg ccgacgggca
     2581 agcctgctcg agtgagcccg gccggcatcg aggcagcggg ctggccggtc aggttgaagg
     2641 gcagggtgta cggcgcgcct ttggtccagc gcgggaaggc gtcggaattg tacagtgtct
     2701 cgacaagtgg cgcggatgtc ggcgtcaccg gcgccagcag gagatcgtgc ttgcggtgcc
     2761 acagcgccat gtcgcgcgcg agcttgctct tggcctcgta ggccttggca tagtcggcca
     2821 aagtgatcgc gagtcccttc tcggcggcgg cgcggaagcc cggatcgagc ttgccgtgaa
     2881 gttgggtcgg gatctggcgc aagcgaacag cgaagctgcc gagccacaat ggctcgaagg
     2941 aattctgcaa cggctcgatc agcgggccga cctcttcgac aagggcgccg agttcctcga
     3001 agcgcttggc ggcggcgacg accagggcgc gtatctcggc atcggccttg acatggccga
     3061 gatcgaggct gaggccaagc ttgaggccgc gcacgccctc ttcgagtccg atcgtgtagt
     3121 cgcgcggctc ggccggcagc gagcgccagt cgcgcggatc cggaccagcc atcgcgttca
     3181 gcgccagcgc cgtgtcacgc acggtacgcg acagcacgcc ctgactcacc acgtcggcaa
     3241 acggcgcgtc ggcaggatat tgggcgatgc ggccgaaggt cggcttcagc ccgaccaggc
     3301 cggtgtgcgc ggccggaatg cggatcgagc cgccgccgtc gttgccatga ttgaacggat
     3361 tgacaccggc ggcggcgagc gcggcagcgc cgccggacga gccgccgggc gagcgcttca
     3421 ggttccacgg gctgcgcgtg gtgccctgca ggggcgaatc ggtcagcgcc ttccagccga
     3481 attccggcgt cgtggtcttg ccgagcagca ccatgcctgc cgcctgtagt ctctcgacgg
     3541 cgggggcact ctcggcggcc ggcgtctcgt cggtggcgtg cgagccgatc cgcgtcggcc
     3601 agcccttgac ctgcgtggtg tccttgatcg aggtcggcac accgtcgagg ggcgacagcg
     3661 gcacgtcctt tagccagcgt gcctcagact cttttgccgc cttgcgcgcg ccggcggcgt
     3721 cgatcaggac gaaagcgttg agatgggttt gcagcgccga tgcccgcgcc agcatagcct
     3781 cgacggtatc gaccggagag agttcgcgac ggcgatagag actgctgagt tgcgctgcgg
     3841 aaagccaggt caatgagcgt tcggacatgc ggtcggtcga ttccaatggt ttcacggggt
     3901 gcgaagtaaa cgcattcttc aattgataca accgcgcggc tgatcgcacc ggccgaaagc
     3961 gtatccttcg agcgcaggaa cgatcgaggg tccttgctga tggaagaaat cgtctattac
     4021 ggcgtgatcg cggcgatgat cgtctttggc ctgtatgccg gcaatcgatg ggcgcgttcg
     4081 atgggccagg ccgtgctgct cggtttggtc gggagcgcgc tcgccgtcgc ggcgtttttg
     4141 tgcctgatcg tcgtgctcgc cgtcttttcc cccaccggtc atgacccgac ggaagtgacc
     4201 gtccggctgg gcgcactgct gctcttcgga tcggcgctcg ggccggtgtc ggcaatcggc
     4261 ggccggcgac gcgccgagaa ggccgcccgg ctgttttaac ggacgaaata ccgtccttcc
     4321 cgaaggccgg ctggcgacgc taagctcgcc ctagtcggga gggaagacat gaccgaagtg
     4381 aagctcggcg ccgccaccgt gcggcgcatc gaagagtcgt acgagcccaa cttcgacgcc
     4441 aagatgttct tccccgactg gcagcccggc gtggtgcagc agcatcgcga ctggctgctg
     4501 cccaaccact acgacgagcc gtcgggcttc ctgaagctca gcgtccatag ctggcttcta
     4561 acggtcggcg gcaagcgcat cctgatcgac acctgcgtcg gcaatcacaa gtcgcgcccg
     4621 caccggccca agtggcatct gatggagacc agatacctcg aacggctgaa ggaggccggc
     4681 gtcgagcccg accaggtcga catggtgatg tgcacccatc tccatgtcga tcacgtcggc
     4741 tggaacacaa agctggagaa cggcaagtgg gtgccgacct tcaggaacgc caagtacgtg
     4801 ttcagccgcg ccgactacga tcactacctg aagctggaca gcgatcccaa gaccggaccg
     4861 gtcaatgccg gttcgttccg cgattccgtg ctgccggtgg tcgaggcggg attgacccag
     4921 atggtcgacg gcgccgccca actcgacgag aatctcaagg tcgagccggc gccgggtcac
     4981 acgcccggca ccatcgccat aaaattcgaa tcgcgcggcg agcgggcgct gttctgcggc
     5041 gacatcctgc accatgccct gcaggtctat cacccggagt ggaacagctt cgcctgcgcc
     5101 gagcccgtcg gtgcgcgcaa gagccggcgc gcggcgctcg agcattgcgc cggctcgggc
     5161 gcgcggctga tgccctgcca tttcggcgcg ccgttcacct gccacatcga tgccaaggga
     5221 agcggcttcg cgccgcgctt cgacgctcag tactgataga ggggaagaca tgatctacga
     5281 attgcgagtc tacaaatgcg tccccggccg cttgccggcg ctgctcaacc gcttcgccaa
     5341 catcaccttg aagctgtggg acaagcacgg catcaagcag gccggcttct ggaccaccgt
     5401 ggtgggcgaa tccagtcagg agctctacta tttgctggcc tgggaatcgc tcgctgaccg
     5461 cgagaagaaa tggaacgcct tcgtggtcga tcccgaatgg ctcgccaagc gcgccgagac
     5521 cgagaaggac ggcgctatcg tggccaacgt ttccaaccag ctcctggcgc cgacggcgtt
     5581 ttcgtcggtg aagtgacggc gaagccgtca tgttgagcga agcgaaacat ccctcaggcc
     5641 gctgaaaggt ccttcactgc gctcgggatg acaatgggcg cgcagggcgc ccattgtcac
     5701 tccgccttga ggccggcttc cttggcgagc ttggcccatt tggcgtagtc gttggccacg
     5761 taggcggcga actcggcggg cgtggcgaac tgcggatcgg cgccgagctc ggtgaatttg
     5821 cgcgcgacgt cgggcgaacg gatggtggcg tcgacggcgg cgtgcaggcg ctcgaccagg
     5881 gaaggcgaag cgccggccgg caggaagatg ccgtaggaga tcgccgcttc gtaacccggc
     5941 aggcccgact ctgaaatggt cgggatgtcg ggcgcggcgg cggagcgcgt cgtcgaggtc
     6001 tggccgagcg acttcagctt gcccgccttg acatgcggca gcgccgtcga gaggccgccg
     6061 aagtagagat cgaccaagcc cgccatcagg tcggccatgg ccggtccgcc gcccttgtag
     6121 ggcacgtgca cgatgtcgac ctggcccatc gacttgaaca gctcgagcgc gaggtgggtg
     6181 gcgccgccgg cgccggccga ggcgccgttc agcttgcccg gccgggcgcg cgccagcgcc
     6241 aagagctcgg cgacgtcgtt ggccggcagg tcgttgcgca ccaccagcag catcggattg
     6301 atgccgaccg gcgccaccgc cgcgaaatcg atgcgcacgt cgaacggcag gttgcgattg
     6361 agcgccggcg ccaccgtggt cgagccgttg gatgccagca tgaagacgct gccatcgggc
     6421 ggcgccttgg cgaccgaggc ggcggcgatc tcgccgttgg cgccggcgcg gttctcgacc
     6481 acgaccgggc gcttcagccg ctcgccgatg cctggcgcca cgatgcgcgc caggagatcg
     6541 ttgggtccgc cgggcggaaa tccgacgacg aagcgcagcg gccgatcggg gaagtccgcg
     6601 tcttgggcgc ggccgctggc aaacggcacg gcgatggtgg cggcaagagc ggcgcgacgc
     6661 gtgagcatgg cggaactatg ctaggctttc t
//
LOCUS       DASWGA010000463         3184 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_933514, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000463 DASWGA010000000
VERSION     DASWGA010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3184
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_933514"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1089)
                     /locus_tag="VF991_11090"
     CDS             complement(<1..1089)
                     /locus_tag="VF991_11090"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9557034.1"
                     /translation="MARTQSASWRRVAADPALLGAIAAVWILLLLFVLFPMAHLLERA
                     FVDDGGFTLEPLLSSITDTSHQAAFVNSLILATAVGVLGTALGFLFALTAVRGGLGRH
                     WLTALDAAALLPLVSPPFTTSISIIFSFGPRGFITHDLLGLTNVSAYGFWSTALAETL
                     TYFPIAYLTLRPILAAIDPNLEEMAFSLGGSRWRIFRTVTLPLAVPGFANAFLLLFAA
                     SLADFATPLILAGNSFPVLPTQAYLQITGLFDFKGGAVLSLILLLPAAAVFLLQRHWV
                     GKRVYVTVTGKVGQRSRTRAIAPWASVVLVAACFAVAAIIVYFYALLAIASLVVAFGA
                     NNGFTWHHYHVIFTEGLPAIRDTLIIAAI"
     gene            complement(1094..2107)
                     /locus_tag="VF991_11095"
     CDS             complement(1094..2107)
                     /locus_tag="VF991_11095"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557035.1"
                     /translation="MRLLRPALLALAGWLAGIAVAHAADPLNVYTIWPENYARPMFQE
                     FEKQTAIKVNFLRFSSGEALARVIAEKNNPRIDVLFGGPVETFAAGIKEGIFEAYKSP
                     SFAKLPARFKQVDGQWTAIADDPLVFMTNAAFLKTNNLQPPASWGDLLNPAYKNSLQM
                     ADARTSGTAVTRIFSVLEVYERNEDKAFDYLKKLRQNVQVYTKSGGGGTLPVGLGQAG
                     GGIFFIVDALETKAKGYDVIISFPKEGIGSSAEAIALIKGAKNPESAKKLIDFATSAA
                     MQSKFSEYKVNFVPASPDVKTDPALAEVLKGAKIFPIDDEYAGANRKRIIERWVKEVL
                     PAQ"
     gene            complement(2483..2872)
                     /locus_tag="VF991_11100"
     CDS             complement(2483..2872)
                     /locus_tag="VF991_11100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557036.1"
                     /translation="MAYLELAPAITAIRSRPEEFEFSNNTLHHLRSRHTFHFVSDDDV
                     QIHAACDCASLRASPEQTKVFHTAYRQWYASYWRPLEINREFASHFAPPSLWQRMAIW
                     LLRRLLSWPQPAKSPSMKAALPLQPAS"
     gene            complement(2992..>3184)
                     /locus_tag="VF991_11105"
     CDS             complement(2992..>3184)
                     /locus_tag="VF991_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9557037.1"
                     /translation="QACLNRDGPQAENIEVYGSHCGLGHHPAVVYAIADRLAQPEGAW
                     TKFDRSGWRHLVFPDWQRA"
BASE COUNT          579 a          988 c         1090 g          527 t
ORIGIN      
        1 gatggcggcg atgatcagcg tgtcgcggat cgccggcagg ccctcggtga agatcacgtg
       61 ataatggtgc caggtgaagc cgttgttggc gccgaacgcc accaccagcg aagcgatggc
      121 cagcagggcg tagaaataga cgatgatcgc cgccacggcg aaacaggccg ccaccaggac
      181 cacgctggcc cacggcgcga tggcgcgtgt gcgcgagcgc tggcccacct tgccggtgac
      241 cgtcacatag acccgcttgc cgacccaatg gcgctgcagc aggaagaccg cagcggccgg
      301 cagcagcagg atgagcgaca gcacggcgcc gcccttgaag tcgaacaggc cggtgatctg
      361 cagataggcc tgggtcggca gcacggggaa ggaattgccg gccaggatca gcggcgtcgc
      421 gaagtcggcc agcgaggcgg cgaacagcag caggaaggca ttggcgaagc ccggcacggc
      481 gagcggcagg gtgacggtgc ggaagatgcg ccagcgcgag ccgcccaggc tgaaggccat
      541 ctcctccagg ttggggtcga tcgccgccag gatcggccgc aaggtcagat aggcgatggg
      601 aaagtaggtc agcgtttcgg ccagcgccgt gctccagaag ccgtaggccg agacgttggt
      661 gaggcccagc aggtcgtggg tgatgaagcc tctgggcccg aacgagaaga tgatcgagat
      721 cgacgtcgtg aagggcggcg agaccagcgg cagcagggcc gccgcgtcga gggccgtgag
      781 ccagtggcgg cccaacccgc cccgcaccgc ggtgagtgcg aataggaagc cgagcgccgt
      841 acccagcacg ccaaccgcgg tcgccaggat caggctgttg acgaaggccg cctggtggct
      901 ggtatcggta atgctcgata gcagcggctc gagcgtgaag ccgccgtcat cgacgaaggc
      961 gcgctccagc aggtgggcca tcgggaagag cacgaacagc agcagcagga tccagaccgc
     1021 cgcgatggcg ccgagcagcg ccgggtcggc cgcgacccgg cgccacgacg ccgattgcgt
     1081 cctcgccacg acgctactgc gcaggcagga cttccttcac ccagcgttcg ataatgcgct
     1141 tgcggttggc gccggcatac tcatcgtcga tcgggaagat cttggcgccc ttcagaacct
     1201 cggccagcgc cggatcggtc ttcacgtcgg gactggccgg cacgaagttc accttgtact
     1261 cggagaattt cgactgcatg gcagcgctgg tcgcgaaatc gatcagcttc ttggccgact
     1321 cgggattttt ggcgcccttg atcagcgcga tcgcctcggc cgagctgccg atgccctcct
     1381 tggggaagct gatgatgacg tcgtagccct tggccttggt ctcgagcgcg tcgacgatga
     1441 agaagatgcc gcccccggcc tgccccagcc cgaccggcaa ggtcccgcca ccgccgctct
     1501 tggtgtagac ctgcacgttc tggcgcagct tcttcaggta gtcgaaggcc ttgtcctcgt
     1561 tgcgctcgta gacctccagc accgagaaga tgcgcgtcac cgccgtgccc gaggtgcgcg
     1621 cgtcggccat ctgcaggctg ttcttgtagg ccgggttcag gagatcgccc cacgatgccg
     1681 gcggctgaag gttgttggtc ttgaggaagg cggcgttggt catgaacacc aacggatcgt
     1741 cggcgatcgc cgtccactgg ccgtcgacct gcttgaaacg cgccggcagc ttggcgaagg
     1801 acggcgactt gtaggcctcg aagatacctt ccttgatgcc tgcggcgaag gtctcgaccg
     1861 ggccgccaaa cagcacgtcg atgcgcgggt tgttcttctc ggcgatgacg cgggccagcg
     1921 cctcgcccga ggagaagcgc aggaagttga ccttgatggc tgtctgcttc tcgaactcct
     1981 ggaacatcgg ccgcgcgtag ttctccggcc agatcgtgta gacattcagt ggatcggccg
     2041 cgtgagcgac ggcgatgccg gccaaccatc cggccagcgc gagcagagca ggacgaagca
     2101 atctcatcaa ttccccccga cgaccgttgt tacttggagc cgatattggc tcccgcgaag
     2161 gcttgcgtcc atgcgcgccc gcgccgtcct tcctcaggcc ggctttccga tgcgcgcgac
     2221 tggccgcccg ccgcggtcga acatctcaca gagggtggga tcagcgggcc ggcgttggtg
     2281 ccacaagagg tccgctattg gtcgcggtga tccagatcat cgcttcatcg ctcgcggcct
     2341 gatatccagg acagcgacgc gctgatttag ggcgcgcgtc tttgagctgg cccgtcccgt
     2401 ggtgtgcggg acgggctttt ctctcggaaa gatgcccgcg gacggatcat tccggcgcga
     2461 aacggcgctc tgccgtgcgg cgtcagctgg cgggctgcag cggcagggcg gctttcatcg
     2521 acggcgactt ggccggctgc ggccaggaca gcagacgcct gagcagccaa atggccatcc
     2581 gctgccacaa tgacggcggc gcaaagtgcg aagcgaattc gcgatttatt tccaagggcc
     2641 gccaatagga tgcgtaccac tgccgatacg ccgtgtgaaa aaccttggtc tgctccggcg
     2701 acgcccggag gctggcgcaa tcgcaagcgg catgaatctg cacgtcgtcg tcgctgacga
     2761 agtggaacgt gtgccgacta cgcaggtgat gaagggtgtt gttggagaat tcgaactcct
     2821 cgggtcgcga gcgaattgcc gtgattgccg gagcaagttc caggtaagcc atcagacact
     2881 cctctggttg atggcccatc aacgccatgt ggccttgctt gggtgcacag ccgccaaaaa
     2941 attttcgcct tggcctgatg cgggcagagg acaaagccag gctgcgagcg gtcaagcgcg
     3001 ctgccagtcc gggaagacga gatggcgcca gccgctgcgg tcgaatttcg tccaggcgcc
     3061 ctccggctgg gcgaggcggt cggcgatggc gtagaccacc gccggatgat ggccgaggcc
     3121 gcagtggctg ccatagacct cgatgttctc ggcctggggc ccgtctctgt tcaggcaagc
     3181 ctgc
//
LOCUS       DASWGA010000464         2593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_814107, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000464 DASWGA010000000
VERSION     DASWGA010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2593
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814107"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VF991_11110"
     CDS             complement(<1..757)
                     /locus_tag="VF991_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-hydroxynicotinate reductase"
                     /protein_id="HEX9557038.1"
                     /translation="MSDDLALSEAERGAGIVRCDACPVLCRIRPGRAGACDRYANEDG
                     KLVRVDPLVLLAKPDLARVAFIEGSSAWRGELGKGEGAFVTGIGATTTYPDYKPAPFI
                     VSSRHQGVDMVTVVTEGIFSYCGVKVKIDTDRYLGPEQAAVRVKGEAVGHVTTAEYGS
                     QMLSLGGVHHLTGGSKKEGVVTCEALLALCNRQAVELAIDGGSTVMVQADKPPIVNGT
                     LEERMRVGCGSAAIGMFAPQWKDHVDEVIVVDDH"
     gene            complement(754..>2593)
                     /locus_tag="VF991_11115"
     CDS             complement(754..>2593)
                     /locus_tag="VF991_11115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9557039.1"
                     /translation="ATAADAPLVQADKPRNLLLEGGVRRGNTGEAFATCAAAAEGVFE
                     TAFVEHAYIEPEAGWAVRVGDRIELHVSTQTPYMNRDEVANVMRLRPEAVRIVPTACG
                     GGFGGKLDLSLHPLLALAAWKLGHSVACVYTRPESMAASTKRHPARVAARFGCDADGK
                     LLACDVTATFDTGAYASWGPTVANRVPVHAMGPYAVPHVRTWGEAFFTNGPPAGAFRG
                     FGVPQAAIAHEAMMDALADKLGIDRLEFRHRNALRAGDTTSTGQRLAHSAGLAQCLDA
                     LRPHWKKAHDEVASFNAHSGHRRRGVGIGCMWYGIGNTSMSNPSHMRVGLSPAGTLTL
                     YSGAVDIGQGSNTIMTQIAADALGLPAAQFALVAGDTDLTADAGKTSASRQTFVSGMA
                     AERAGRDLRRQILRLANAGPGAELSLEGAKLTVRDGGEVRRIDLASAGMLMGEGTFDP
                     PTTPLDADGQGVPYATYAFAAQMATVEVDTELGTVKVLRLVAVHDVGRAINPTLVEGQ
                     IQGGVAQGLGLALMEEYLPGRTGNLHDYLIPTVGDVPEIECILIEDREPLGPSGAKGV
                     GEPGLVPTAPAILGAVHHATGVRAHRVPLLPHRLREAIVALHGKGT"
BASE COUNT          402 a          889 c          894 g          408 t
ORIGIN      
        1 tgtgatcgtc gaccacgatc acctcgtcga catggtcctt ccattgcggc gcgaacatgc
       61 cgatggcggc cgagccgcag cccacccgca tgcgctcctc gagcgtgcca ttgacgatgg
      121 gcggcttgtc ggcctgcacc atcaccgtcg agccgccatc gatcgccagc tcgacggctt
      181 ggcgattgca tagcgccagc agcgcttcgc aggtgacgac accctctttc ttgctgccgc
      241 cggtcaggtg atgcacgccg cccagcgaca gcatctgcga gccgtattcc gccgtcgtga
      301 catgaccgac ggcctcgccc ttcacccgga ccgctgcctg ctcgggcccg agatagcggt
      361 cggtgtcgat tttcaccttc acgccgcagt agctgaagat gccctcggtc acgaccgtga
      421 ccatatccac gccctggtgt ctggaggaca cgataaaggg cgcgggcttg tagtcgggat
      481 aggtcgttgt ggcgccgatg ccggtgacga aggcgccctc gcccttgccg agctcgccgc
      541 gccaggctga gctgccctcg atgaaggcga cgcgtgcgag gtcgggcttg gccagcagca
      601 ccagcggatc gacgcgcacc agcttgccgt cctcgttggc gtagcgatcg caggcgccgg
      661 cgcggccggg gcggatgcgg cagagcacgg gacaggcatc gcagcgcacg atgccggcac
      721 cgcgttcggc ctcgctgagc gccagatcgt cgctcatgtc cccttcccgt ggagagcaac
      781 gatggcctcg cgcaggcggt gcggcaacag cgggacacgg tgcgcgcgta cgccggtggc
      841 gtgatgcacc gcgcccagga tggccggcgc cgtcggcacc aggccgggtt cgcccacgcc
      901 cttggcgccg gacggaccca agggctcgcg atcctcgatc aggatgcact cgatctccgg
      961 cacgtctccg acggtcggga tcaggtagtc gtgcagattc ccggtgcggc ctggaagata
     1021 ttcctccatc agcgccaacc ccaagccttg cgccacgcca ccctggatct ggccctcgac
     1081 cagcgtggga ttgatcgcgc ggccgacatc gtgaacggcc acgaggcgca gcaccttcac
     1141 ggtgccgagc tcggtatcga cctcgaccgt ggccatctgg gcggcaaaag cataggtggc
     1201 gtaaggcacg ccctggccat cggcatcgag cggcgtggtt ggcggatcga aggtgccctc
     1261 gcccatcagc atgccggcgc tcgccagatc gatccggcgc acctcgccgc catcgcgcac
     1321 ggtgagcttg gcgccttcaa ggctcagttc ggcgcccggt ccggcattgg ccaagcgcag
     1381 gatctgccgg cgcaggtcgc ggccggcgcg ctcggccgcc atgcccgaga cgaaggtctg
     1441 gcgcgacgcc gaggtcttgc cggcatcggc cgtcaagtcg gtgtcgcccg cgaccagcgc
     1501 gaactgtgcg gcgggcaggc cgagcgcatc ggcggcgatc tgggtcatga tggtgttgga
     1561 gccctgcccg atatcgaccg cgccgctgta gagagtgagc gtgccggccg gcgacaggcc
     1621 gacccgcatg tgcgagggat tggacatcga ggtgttgccg atgccgtacc acatgcagcc
     1681 gataccgacg ccacgccgcc tgtgacctga atgggcgttg aaggaagcga cttcgtcgtg
     1741 tgccttcttc cagtgaggcc gcagcgcatc gaggcattgc gccaggccgg ccgagtgcgc
     1801 cagccgctgg ccggtcgagg tcgtgtcgcc ggcccgcagc gcattgcgat gacggaactc
     1861 caagcggtcg ataccgagct tgtcggccag cgcgtccatc atcgcctcgt gggcgatggc
     1921 ggcttgcggc acgccgaagc cgcggaaggc accggccggc gggccgttgg tgaagaaggc
     1981 ctcgccccag gtcctgacat ggggcacggc atagggaccc atcgcatgga ccggcacgcg
     2041 attggcaacg gtcgggcccc aggaggcata ggcgcccgta tcgaaggtcg ccgtcacgtc
     2101 gcaggccaaa agcttgccgt cggcatcgca gccgaaccgg gcagcgaccc gcgcgggatg
     2161 gcgcttggtg ctggcggcca tgctttcggg ccttgtgtag acgcaggcga ccgagtggcc
     2221 gagcttccac gccgccagcg ccaacagcgg gtggagcgac agatcgagct tgccgccgaa
     2281 gccgccaccg caggcggtcg gcacgatgcg caccgcctcg ggcctgagtc gcatcacgtt
     2341 cgcgacttcg tcgcgattca tgtaaggcgt ctgggtgctg acatggagct cgatgcggtc
     2401 gcccacccgc acggcccagc ccgcttccgg ttcgatgtag gcgtgttcga caaaggcggt
     2461 ttcgaagacg ccttcggccg cggccgcgca ggttgcgaag gcttcgcctg tattgccgcg
     2521 ccgcacccca ccctcgagca ggagattcct gggcttgtcg gcctgcacca ggggcgcatc
     2581 ggccgccgtg gcg
//
LOCUS       DASWGA010000465         1800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1575316, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000465 DASWGA010000000
VERSION     DASWGA010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575316"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VF991_11120"
     CDS             <1..236
                     /locus_tag="VF991_11120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEX9557040.1"
                     /translation="KGKDWLIVDDLVDTGVTARAVRALLPQAHFATVYAKPAGRPSVD
                     SYITEVSQDTWILFPWDQEAVMAKTIVELKGGQ"
     gene            250..>1800
                     /locus_tag="VF991_11125"
     CDS             250..>1800
                     /locus_tag="VF991_11125"
                     /inference="COORDINATES: protein motif:HMM:NF006192.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aldolase/short-chain dehydrogenase"
                     /protein_id="HEX9557041.1"
                     /translation="MQNLWSDADAKAAIARHAGQGIGEDLALRVYTTRLLGGEPRLVL
                     HGGGNTSVKTRVADVTGEPVEVLCVKGSGWDMGTIEAPGLPAVRLAPLGGLLGLQALS
                     DEDMVNIQRCNLLDSKAPNPSVETLLHAFLPHKFIDHTHSNAVLALTDQPDGENLACD
                     VFGKRAALVPYIMPGFALAKKASEVSRAHPDAEGLILLKHGIFSMGATAEEAYVRMID
                     LVTLAEKRLAKATRKIFPGAALPEKIAAVADVAPILRGLISLPAKSGGREAAQRFVFE
                     FRTGPEILAYVAGKEIDRYSQQGPVTPDHAIRTKNVPLVLPAPEAGKLDEFKTAAKKA
                     LAAYIADYHAYFARHNVRQMPSKTELDPMPRVVLAPGLGLFGLGKSSKDAKIAADLAE
                     TTVEVVADAERLGTYECIPEPDIFDIEYWSLEQAKLGAAAEKPLARRIVVVTGGGSGI
                     GAATAQAFAREGAEVVVLDREVAKVKGFAIACDVTDPAQVRAAFDKIAADLAETTVAV
                     VADAERLGT"
BASE COUNT          304 a          626 c          605 g          265 t
ORIGIN      
        1 agaagggcaa ggactggctg atcgtcgacg acctggtcga caccggcgtc actgcccgcg
       61 ccgtgcgcgc cttgctgccg caggcgcatt tcgccaccgt ctatgccaag cccgccggcc
      121 ggccgtcggt cgacagctac atcaccgagg tgagccagga cacctggatc ctgttcccgt
      181 gggaccagga ggcggtcatg gctaagacca tcgtcgagtt gaaaggcggc cagtgaagag
      241 gggcaagtga tgcagaacct gtggtccgat gccgacgcca aggccgcgat cgcccgtcac
      301 gccggccagg gcatcggcga ggatctggcg ctgcgcgtct acacgacgcg tctgctgggc
      361 ggcgagccca ggctggtgct gcatggcggc ggcaacacct cggtgaagac ccgcgtggcc
      421 gacgtcaccg gcgagccggt cgaggtcctt tgcgtaaaag gcagcggctg ggacatgggc
      481 accatcgagg cgcccggtct gccggccgtt cggctggcgc cgctgggcgg cctgctcggc
      541 ctgcaggcgc tcagcgacga ggacatggtc aatatccagc gctgcaatct tttggacagc
      601 aaggcgccca acccctcggt cgagaccctg ctgcacgcct tcctgccgca caaattcatc
      661 gaccacaccc attccaacgc cgtgctggcg ctgaccgacc agcctgacgg cgagaacctg
      721 gcgtgcgacg tgttcggcaa gcgtgccgcg ctggtgccct acatcatgcc gggctttgcg
      781 ctggccaaga aggcgagcga agtctcgcgc gcccatcccg acgccgaggg actgatcctg
      841 ctgaagcacg gcatcttctc gatgggcgcc accgccgaag aggcctatgt ccgcatgatc
      901 gacctggtga ccctggcgga gaagcgcctc gccaaggcca cgcgcaagat cttcccgggc
      961 gctgcgttgc ccgaaaagat cgcggcggtg gccgacgtgg cgccgatcct gcgcggcctg
     1021 atatcgctgc cggccaagtc gggcgggcgc gaagccgccc agcgcttcgt gttcgagttc
     1081 cgcaccgggc cggagatcct cgcctatgtc gccggcaagg agatcgatcg ctacagccag
     1141 cagggaccgg tgacgcccga ccacgccatc cgcaccaaga acgtgccgct cgtcctgccg
     1201 gcgcccgaag cgggcaagct cgatgaattc aagacggcgg cgaagaaggc gctcgcggcc
     1261 tatatcgccg actatcacgc ctatttcgcg cgccacaatg tgcggcagat gccgagcaag
     1321 accgagctcg atccgatgcc gcgtgtcgtg ctggcgccgg gcctcggcct gttcgggctc
     1381 ggcaaatcct cgaaggatgc caagatcgcg gccgacctcg ccgagaccac cgtcgaggtc
     1441 gtggccgatg ccgagcggct cggcacctac gagtgcattc ccgagcccga cattttcgac
     1501 atcgagtact ggtcgctcga gcaggccaag ctcggggccg cggccgagaa gccgctggcc
     1561 cgccgcatcg tcgtcgtcac cggcggcggc tcgggcatcg gcgccgccac cgcgcaagct
     1621 tttgcgcgcg agggcgccga ggtcgtggtg ctcgatcgcg aggtcgccaa ggtcaaaggc
     1681 ttcgcgatcg cctgcgacgt caccgacccc gcgcaggtgc gcgccgcctt cgacaagatc
     1741 gccgccgacc tcgccgagac aacggtcgcg gtggtggccg acgccgaacg gctcggcacc
//
LOCUS       DASWGA010000466         1992 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1440436, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000466 DASWGA010000000
VERSION     DASWGA010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1440436"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..473
                     /gene="grrA"
                     /locus_tag="VF991_11130"
     CDS             87..473
                     /gene="grrA"
                     /locus_tag="VF991_11130"
                     /inference="COORDINATES: protein motif:HMM:TIGR04260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrrA/OscA1 family cyclophane-containing
                     rSAM-modified RiPP"
                     /protein_id="HEX9557042.1"
                     /translation="MAQDRRSARALAALLPAGALGLSVSLASADAAASRSQDSGRDAK
                     KPGEVAKRLQSIRLSVSDAMEKYARDGEPVVGIDPETQLAWWGNGGWRNGGWRNGGWG
                     NGGWHNWGNGGWHNWGNGWHNGWLNW"
     gene            478..1698
                     /gene="grrM"
                     /locus_tag="VF991_11135"
     CDS             478..1698
                     /gene="grrM"
                     /locus_tag="VF991_11135"
                     /inference="COORDINATES: protein motif:HMM:TIGR04261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclophane-forming radical SAM/SPASM peptide
                     maturase GrrM/OscB"
                     /protein_id="HEX9557043.1"
                     /translation="MTAEPCRPEIGMVVVQPTAFCNINCTYCYLPDRDNKHVIAQSTV
                     NRLFGEIFASGWACPEITVVWHAGEPLVVPVSFYREAFAAIERLRPQSVIVKHSFQTN
                     GMLIDAEWCRLFLDWNVGVGVSIDGPRDLHDRHRKTRSGKGTFDRTLAGIRCLRSHDV
                     PFHVITVLSRDSLERPDELLAFYLDEGIDQICFNVEESEGDHVSELFDGPELRARYGA
                     FLRRFWHGARASGRVKFLREIDLALPRVFRPDGLPTRNVQTEPLAMLNVDSHGNVSSF
                     SPELLGLKNKDYGDFLLGNINRQSLGQIHQACLASALHRDIQRGVRACEGTCEYFSVC
                     GGGAPANKLFENGSFAGTTTAYCTLTQMVPTDLILEAYDRLEQSWTDSDPAPFLQPKS
                     QTTAEAALQSPRMP"
     gene            1695..>1992
                     /locus_tag="VF991_11140"
     CDS             1695..>1992
                     /locus_tag="VF991_11140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557044.1"
                     /translation="MTRSKLFALACLLAATMLSAPSQGQQQPTAPGAQPPAAGARPPA
                     AGAPAQGGPQAPGSQQSGPPPGGPEQTEGPPWPIMVVTSIEVLRSARAGGMDVVR"
BASE COUNT          323 a          678 c          663 g          328 t
ORIGIN      
        1 tgaccctttg gttctgaccc tgtcttttca tttgccggtg gattgcaagt ctgggtaacg
       61 tggctctcca gggagaggga gatcacatgg cccaggatcg gcgttccgct cgcgctttgg
      121 ctgccttgtt gccggccggc gcccttggcc tttcggtcag ccttgcatcg gccgatgccg
      181 cggccagccg ctcgcaggac agcggccgcg atgccaagaa gcctggcgaa gtcgccaagc
      241 gcctgcagtc gatacgcctg tcggtgtccg acgccatgga gaagtacgcc agggacggcg
      301 agccggttgt cgggattgac cccgagacac agcttgcctg gtggggcaac ggcggctggc
      361 gcaacggcgg atggcgcaac ggcggttggg gcaatggcgg ttggcacaat tggggcaacg
      421 gcggctggca caactggggc aacggttggc acaacggctg gttgaactgg taggctgatg
      481 accgcggaac cctgccggcc ggagatcggc atggtagtgg tgcagccgac cgccttctgc
      541 aacatcaact gcacctactg ctaccttccc gatcgcgaca acaagcacgt catcgcccag
      601 tcgacggtga accggctgtt cggcgagatt ttcgcctcgg gctgggcctg tccggagatc
      661 accgtggtgt ggcacgccgg cgagccgctg gtggtgccgg tgtccttcta tcgcgaggcc
      721 ttcgccgcca tcgaacggct gcggccgcaa tcggtgatcg tgaagcactc gttccagacc
      781 aacggcatgc tgatcgacgc cgagtggtgc cggctcttcc tcgactggaa cgtgggcgtc
      841 ggtgtcagca tcgacgggcc gcgcgacctg cacgaccgcc atcgcaagac gcgcagcggc
      901 aagggcacgt tcgaccggac cctggccggc atccgctgcc tgcgctcgca cgatgtgccg
      961 tttcatgtca tcaccgtgct gtcgcgcgac agccttgaga ggcccgacga gttgctcgcg
     1021 ttctatctcg acgagggcat cgaccagatc tgcttcaacg tcgaggagtc cgaaggcgat
     1081 cacgtctccg agctgttcga tggccccgag ttgcgcgcac gctatggcgc cttcctgcgt
     1141 cgtttctggc acggcgcgcg agcgagcggc cgggtgaagt tcctgcgcga aatcgacctc
     1201 gcgctgccgc gcgtgtttcg tcccgacggc ctgccgacgc gcaacgtcca gaccgagccg
     1261 ctggccatgc tgaacgtcga cagccacggc aacgtctcga gcttctcgcc cgagctgctg
     1321 gggctgaaga acaaggacta cggcgacttt ctgctgggca acatcaaccg ccaatcgctc
     1381 ggccagatcc accaggcctg cctcgcctcg gcgctccatc gcgacatcca gaggggcgtg
     1441 cgggcttgcg aggggacttg cgaatatttc tcggtctgcg gcggcggcgc gccggccaac
     1501 aagctgttcg agaacggctc gttcgccggc acgacgacgg cgtactgcac gctcacccag
     1561 atggtgccga ccgatctcat tctcgaggcc tacgaccgcc tcgagcaaag ctggaccgac
     1621 agcgatccgg cgcccttcct ccaaccgaaa tcgcagacga cggccgaggc cgccctgcag
     1681 tcaccgagga tgccatgacc cgatcgaaat tgttcgccct cgcctgcctt ctggccgcga
     1741 ccatgctgag cgcaccctcg caaggccagc agcagccgac tgccccgggc gcccagccgc
     1801 ccgccgccgg cgcccggccg ccagcggccg gcgccccggc gcaaggcgga ccgcaggcgc
     1861 cgggcagcca gcaatcgggc ccgccgccgg gaggaccgga gcaaaccgaa ggtccgccgt
     1921 ggccgatcat ggtggtgacc agcatcgagg tcctgcgctc ggcgcgcgcc ggcggcatgg
     1981 acgtcgtgcg cg
//
LOCUS       DASWGA010000467        15034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1819531, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000467 DASWGA010000000
VERSION     DASWGA010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 15034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15034
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1819531"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            212..1954
                     /locus_tag="VF991_11145"
     CDS             212..1954
                     /locus_tag="VF991_11145"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9557045.1"
                     /translation="MPIYAFGPFVLDPAERRLTRSGRRVAVPAKAWQILVLLAEAGGR
                     LVPHETLRAKLWPNVVVEDRTLTVHMSTLRKALGAGPPEDCIETVARAGYRLAVPVRV
                     LSEADPAPQAVSGPPMAEARPLAVRPFSTRDLAEADTYLGVGIADAVSTALGAVPGLT
                     VWPVGAVEDLAGARDTVEACRTLGVGHLLEGAVRRSAERLQISARLIDVASGRTQWSE
                     RFEQSQVDGVALQDAIAERVATSLPQLSAVDHGLHSYRPRAAEAYFLQLEARAHLKPF
                     TRLPLMKALSLFEQALVLDPDYAMAHAGLASTYLLMASTAMLRPLQVDEAMPMARRAA
                     QRAIALDEGLAEAWAALGRVKMEYDWDWDGAEADLAHAVALNSSSVEALGTFGQFLSA
                     MGRNDEAIEAMEQARRLDPRSVETLQHLAIVYWMAGQGDRALEAVDDSLKVAPGSPRA
                     HYGRMMILDQLGRRDEAMAERLTTLRGLSVAQGVAEQVEALARSKGWRQAMDVWIALL
                     ERTNRWEGAAMQWMAAGESSRALDALEHCVKARTTYLCFTAQNPYFRPLHNNPRFQQI
                     LQTLKLDGRSTGPA"
     gene            complement(1961..2263)
                     /locus_tag="VF991_11150"
     CDS             complement(1961..2263)
                     /locus_tag="VF991_11150"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEX9557046.1"
                     /translation="MPWRRADKTLPITQYYGAGITGFGLIADRERDSMGIGFGLSRLN
                     PNLFARPSELMFQAYYQAHLFAATFLQPTISYIPTPGASPTLPGALTTTLRLTVLF"
     gene            2319..3500
                     /locus_tag="VF991_11155"
     CDS             2319..3500
                     /locus_tag="VF991_11155"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding protein"
                     /protein_id="HEX9557047.1"
                     /translation="MRIETLKQTALVALCSCMVSTWAFVPTKVDAADPIKIGAVLPFS
                     GGVELYGRQAKLGLDLAAADINAAGGILGRPVEIVYRDDGTRPNIATEAARRMVEEDG
                     ALAVVGPITSQNLDAIVPVLAAHKTPLLYATNYEGGKCNRYMFSFNTVPNQELDSLLP
                     YMTKTFGADYFLLGADRDWPHRMFDAAEPLIAKLGGRVVAKQYTLGSEKDFTPLISRV
                     ADSKAKVLLYALKGDGMQFIPLASDRGVFKTMTVAFLGLTEADLKAFGGKVDNIYAAV
                     PFVVASQDPKAKAFVARARAKAGPDMAISNYVETHYNTLLAVKAALEKAGKVDKEALI
                     DALEGLKFDSPGGAVTIGKDHHATLNMFLAKTQGANLVEVQALGEIAPRSGCTAGALA
                     R"
     gene            complement(3615..5912)
                     /locus_tag="VF991_11160"
     CDS             complement(3615..5912)
                     /locus_tag="VF991_11160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007821853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX9557048.1"
                     /translation="MTHQRTLTAAHWGVYEVEYDEAGKAKRLHPFSKDPDPSPIGLHM
                     LSDEVTRLRVHRPAVRKSWLEKGPGAAPERRGQEPFVELPWDEALDLVAGELTRVKEA
                     HSNRAIFGGSYGWSSAGRFHHAQSQVHRFLNSVGGYVRHQDSYSLGAARVLMPHIVAP
                     MDELMSMHTPWDVLADNCKLFVAFGGVPHKNSQINAGGATMHHVKGGLYGMRDKGVRF
                     VNVTPTADDLDTGGNVEWLAIRPNTDAALILALCHTLWQEKLHDRDFLDRCTVGFDKF
                     AASLAGKDAVWAEKITGIPASRITSLAREMAATRTTVSINWSLQRSHHGEQPFWALVT
                     LACMLGQIGLPGGGFGVGYGPVNLMGSGFPKYSGPTLPQGTNAVSDFIPVARFCDMLL
                     NPGGKLPYNGRDLTYPDIRLVYWAGGNPFHHHQDLNRLRTAWRKPETIVFHEQFWTPA
                     ARMADIVLPATTSLERDDIGYGSREPFLIAMKKARDAVGEARDDYWIFAEIARRMGKG
                     HDYTEGRDTMAWLKHLYELSRQKSAEAGVSIPAFDAFWQAGIAEAQGKNREPVMLAAF
                     RADPAKNPLKTPSGKIEIYSEKIASFGYDDCPGHATWLEPIEWLGSKTAERYPLHMLS
                     DQPADKLHSQLDHSPHARATKVKGRQPITLHPDDAAARGIADGDLLRVFNDRGACLAA
                     ARLSDRIRRGVVRLSTGAWFDPADSGSNRPLEKHGNPNALTLDIGASKLSQGCIAQTC
                     LVEIERFDGPPPPLTAHQPPAFTTR"
     gene            complement(5920..6960)
                     /locus_tag="VF991_11165"
     CDS             complement(5920..6960)
                     /locus_tag="VF991_11165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low specificity L-threonine aldolase"
                     /protein_id="HEX9557049.1"
                     /translation="MNFRSDNEVGAHPAIIEAVGRAFTSGPAHSYGADDWTQRVERRL
                     RELFDKPDLVAFPVITGTAANSLALACCTPPWGAIYCHPTAHIASEETNAPEFFTSGA
                     RLFRIDGAAGKVDPQKLADALAQPVYGVVHFPQPAAVSITQATECGTVYAPEEIAAIA
                     TSTHRHGLKLHMDGARFANALSFVGCSPAELSWKAGVDVLSLGATKNGVLSAEAVVFF
                     DAGLAREFAFRSKRGGHLLSKMRLLSAQLDAYLADGLWLDNARHANAMARRLVAGLTP
                     LKGTQLLYPVDANEIFVVLPAHMHDALQAAGAQYHPWPSDRPGERAFRLVTAFDTDPT
                     DVERFLSIARSV"
     gene            complement(6957..7352)
                     /locus_tag="VF991_11170"
     CDS             complement(6957..7352)
                     /locus_tag="VF991_11170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018858049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9557050.1"
                     /translation="MIDHLSITTTDLDRAQAFYDAVLGALGYPRVNRRAEAIGYGVRE
                     RTPDAAPYISVYLCTASLVADNRHWCFRAPNRAAVRAFHQAALANGGTDDGPPGIRER
                     YSSDYYAAFVRDPDGNRLEAVTRRAEDQA"
     gene            complement(7353..7682)
                     /locus_tag="VF991_11175"
     CDS             complement(7353..7682)
                     /locus_tag="VF991_11175"
                     /inference="COORDINATES: protein motif:HMM:NF039467.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6476 family protein"
                     /protein_id="HEX9557051.1"
                     /translation="MASPAQASAPLWLKVLVIVMGLLIVAGFVVIAAEIARRMSTPNA
                     GRPPTGTFSERIALPSGARVVSMTTAGDRLVVHVETQGGPAAAYIVDPRNGALLGTVE
                     FPPGPGR"
     gene            7692..8672
                     /locus_tag="VF991_11180"
     CDS             7692..8672
                     /locus_tag="VF991_11180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX9557052.1"
                     /translation="MSDAGRHFVTFDDSASGERLDRALAAALPSLTRSRVKALIESRR
                     VALADGRTIEEPSRKVKTGERFVVDIPEAEPAEPQPQALDLDILYEDSDLLVVDKPAG
                     MVVHPAPGNPDKTLVNALLAHCGASLSGIGGVRRPGIVHRLDKDTSGVMVVAKNDFAH
                     RALSKLFASHDLTRIYQALVWGGPKQKRGTIEAAIGRHPVDRKRMTVPKSGGRPAVTE
                     YWVERHFGPALKPVASLLGAKLGTGRTHQVRVHFAHLGCPVVGDPVYGRKARNAAAPE
                     PLKNFGRQALHAQILQFQHPRTRQDMRFASELPQDFRKLVSELNTVKYYL"
     gene            8799..9725
                     /gene="rpoH"
                     /locus_tag="VF991_11185"
     CDS             8799..9725
                     /gene="rpoH"
                     /locus_tag="VF991_11185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEX9557053.1"
                     /translation="MNATANLPALPSSLTPEGNLSRYLQDIRKFPLLEPQEEFMLAKA
                     WREHGDSKAAHKLVTSHLRLVAKIAMGYRGYGLPVAELISEGNVGMMQAVKRFDPDRG
                     FRLATYAMWWIRASIQEYILHSWSLVKMGTTAAQKKLFFNLRKLKGQMQAIEEGDLSP
                     EQVTKIATRLGVPEEEVVNMNRRLAAPDSSLNAPVKAEGDMEWQDWLVDDTPNQETRL
                     VESQELGQRKHMLAAALKQLTDRERRIIVERRLIDEPKTLEDLSSEYGISRERVRQIE
                     VRAFDKLQKAMKNMVVEAASAASRKVEAHAAR"
     gene            9841..10689
                     /locus_tag="VF991_11190"
     CDS             9841..10689
                     /locus_tag="VF991_11190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX9557054.1"
                     /translation="MTDAILYETPQAGIARIILNRPGTRNAQDTALLYALNEAFDRAA
                     LDDDVKVIVLSANGPHFSSGHDLRETDGHGNMKKHATVGTWGGFGKPGAEAQYAREQE
                     IYIGFCERWRNIPKPTLALVHGKVIAGGLMLIWPCDLIVASEDAEFLDHTVAMGVGGA
                     EFFAHPWELGVRKAKEFLFTADWMGAAEAHRLGMVNHVVPRAELDSFGMAMAERIAQK
                     PLFALKLVKQAVNAAQDAQGRVSAMQTSFALHHLAHAHNMLAHGKLVDPTGLMPAIKK
                     HEKAAD"
     gene            10753..11775
                     /locus_tag="VF991_11195"
     CDS             10753..11775
                     /locus_tag="VF991_11195"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEX9557055.1"
                     /translation="MTAQNIAIVGATGAVGQEILRVLERRNFPVASLKLLASARSVGK
                     TLEFKGKPYPVEELKAAAFKGVDIAFFSAGASRSREFAPAARAAGAVVIDNSSAFRMD
                     PKVPLVVPEVNAGDLARHDGLIANPNCTAAVLAVAVWPIHKAAGVKKIVVSTYQAASG
                     AGAQAMQELEDQVRDYAAGKPVERKVFPHQIAFNLFSHNTKVAENGYNEEENKVIEET
                     RKMFHMPELAVVPTCIRVPVLRAHSEAITLELDKPLSPEEARAIFARAPGVKLVDDAA
                     ANHFPMPLEASGDLDIHVGRIRRDLSNPNGLVLFVAGDQLLKGAAWNAVQIAEALGKP
                     KAVAAE"
     gene            complement(11795..12550)
                     /locus_tag="VF991_11200"
     CDS             complement(11795..12550)
                     /locus_tag="VF991_11200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX9557056.1"
                     /translation="MADAQLVETLSGGGSRTLAIDVGGTGLKASVIDDAGKLLVERVR
                     IDTPVGAPPEKIIEVLALLVAPLGAYDRVSIGFPGVVRDGRVLTAPNLGNTGWKGYGL
                     AAALGKALGKPVRVANDADLQGLAVIAGKGVEMVITLGTGFGTGLYVDGRLGPHLELS
                     HHPFRNGETYDQQLGNAARKAIGGVRWNRRVRKAIANLRTLTNFDRLYIGGGNAKKLD
                     FEPAPDVTVVSNEAGLRGGVALWQTDRKPAQAS"
     gene            12953..13345
                     /locus_tag="VF991_11205"
     CDS             12953..13345
                     /locus_tag="VF991_11205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9557057.1"
                     /translation="MSAAILVGCQPADPVQRASPELQRQYNAAFQDMLDKPGDLAVAL
                     KYATVANQVGDLEGAISTYEGMLLIDSNLPRVRLELGILYYRLKSYEVSRTYLETALQ
                     SPTLPADVRKPAEQLLLKMPKQSRSRGA"
     gene            13433..14215
                     /locus_tag="VF991_11210"
     CDS             13433..14215
                     /locus_tag="VF991_11210"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEX9557058.1"
                     /translation="MLALFSTAQAQSRIGVTQATENKPMGKPPGGVDRVLRVGTDVQA
                     NEIISTSNEDRAHLVFLDGTTLTVGPNSQLTIDKFVYDPTTQKGELAVNASKGVFRLI
                     GGRISKTAAITVTTPSSTMGIRGGIAVFGVQASATTSIFVYGNSMTVTANGVTQTITV
                     PGLQVSTIFGGTPGTPTVVVQGNLSTALATLAGNAQAAAATLLAINTLVADNAGNAVT
                     LQALIQAIINVNAPSTLTTTFNTQLNVITVVENPNQTQASPN"
     gene            complement(14323..>15034)
                     /locus_tag="VF991_11215"
     CDS             complement(14323..>15034)
                     /locus_tag="VF991_11215"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX9557059.1"
                     /translation="RIRLVAAVLVVPHRPAVLAAKMLATLDVLSGGRLVVGIGAGWLK
                     TEFDAVVGPPFAERGLVTDEYIDAFRVLWTERAPRFCGRYTRFDGIVLEPKPVQRPHP
                     PIWVGGEGGPALRRAARVGAAWYPIGSNNKHLLDTLPRLHAGIARLRKATADAGRDPG
                     SVGVGYRVKRYGAVVPAVASDGERRLFSGSDSDIVADLRDLRNAGVTAIDFDFGRPTA
                     VEVIAEMGRFRKAVIERI"
BASE COUNT         2631 a         4917 c         5055 g         2431 t
ORIGIN      
        1 cgtcttcgat cagccggccg acagccaccg tcgatagcgc gatcgccacc ggactgtctc
       61 ggccatcgaa aaagagcccc caacgccatc gccttgcccc gcagacgctg cccaacccgc
      121 cggtacgatg gatcattttc cgcggcgtcg cgtgcgtttg gaggtcaaga atagatcaag
      181 attggataaa gccggtgtat aaaaggagac gatgccgatc tatgcgttcg gtccgtttgt
      241 cctcgatcct gccgagcgcc ggctgacgcg tagcggccgg cgcgtggccg ttcctgcaaa
      301 ggcctggcag atcctggtac tgctggccga ggccggcggc cggctggtcc cgcatgaaac
      361 gctgcgggcg aagctctggc ccaacgtcgt cgtcgaggac cgcacgctca ccgtgcatat
      421 gtcgaccctg cgcaaggcgc tcggggccgg tccgcccgag gactgtatcg agacagtcgc
      481 ccgggcaggc tatcgcctgg ccgtgccggt gcgtgtcctg tcggaggccg acccggcgcc
      541 gcaagccgtc agcgggccgc cgatggccga ggccaggccg cttgcggtgc ggcccttctc
      601 gacgcgcgac ctggccgaag ccgacaccta tctcggggtc ggcattgccg acgcggtgag
      661 caccgcgctg ggcgcggtac cgggcctgac cgtatggccg gtcggcgccg tggaagatct
      721 cgccggcgcg cgcgatacgg tcgaggcctg tcgcacgctc ggggtagggc acctgctgga
      781 gggcgcggtg cggcgcagcg ccgaacgact gcaaatctcg gcacgcctga tcgatgtggc
      841 gagcggccgc acgcagtgga gcgagcgttt cgagcagtcc caggtggacg gtgttgcgtt
      901 gcaggacgcg atcgccgaac gggtcgcgac ctcactccca caattatcgg ccgtcgacca
      961 tggcctgcac agctaccgcc cgcgagcggc ggaggcctat ttcctgcaac tcgaggcgcg
     1021 cgcccatctc aagcctttca cacggctgcc gcttatgaag gcgctcagcc tgttcgaaca
     1081 ggcgctggtg ctcgatcccg actatgccat ggcccacgcc gggctcgcgt cgacctacct
     1141 gctcatggcg tcgaccgcga tgttgcggcc gctgcaggtc gatgaggcga tgccgatggc
     1201 gcgccgggct gcccagaggg cgatcgccct cgacgagggg ctggccgagg cgtgggccgc
     1261 acttggccgc gtgaagatgg agtacgactg ggactgggac ggcgccgagg ccgacctggc
     1321 gcatgcggtc gcccttaatt ccagctcggt cgaagcactc ggcaccttcg gccagttcct
     1381 gagcgcgatg ggccgcaacg acgaagcgat cgaggctatg gagcaggcgc ggcggctcga
     1441 tccgcgcagc gtcgagacgc tccagcatct cgcaatcgtc tactggatgg caggccaagg
     1501 cgaccgcgcg ctcgaggccg tggacgatag cttgaaggtc gctcctggtt ctccccgggc
     1561 acactatggg cgcatgatga ttctcgacca gctcggtcgc cgcgacgagg cgatggccga
     1621 gcgtcttacg acgctccggg ggctgagcgt cgcccagggt gttgccgagc aggtggaagc
     1681 gttggctcgc agcaagggct ggcgacaggc gatggatgtg tggatcgcct tgctcgagcg
     1741 caccaatcgc tgggaggggg cggcgatgca atggatggcc gccggcgagt cgtcacgggc
     1801 gctcgatgct ctcgagcact gcgtgaaggc gcgcaccacc tacctgtgct ttacggcgca
     1861 aaatccgtac ttccgtcccc tccacaacaa cccgcgcttc cagcagatct tgcagacgct
     1921 caagctcgat gggcgctcca caggaccggc gtgagcccgg tcagaaaagg accgtgagtc
     1981 gtagcgtcgt cgtcaatgcg ccgggcagcg tcggcgaggc gccgggtgtc gggatgtagg
     2041 agatggtggg ctgcaggaag gtcgccgcga aaaggtgggc ctgatagtac gcctggaaca
     2101 tcaactcgct gggacgagcg aagagattcg gattgaggcg ggacagcccg aagccgatgc
     2161 ccatcgagtc gcgctcccga tccgcgatca atccgaaccc ggttatgccg gcgccgtagt
     2221 attgggtaat tggaagcgtt ttgtcggcgc gtcgccacgg aattcactta cctgtgctag
     2281 cctcgcgagc gcggcggact ttgtcggggg attgcgtcat gagaattgag actctcaagc
     2341 agacggcgct tgtcgcgctg tgtagttgca tggtgtcgac gtgggcgttc gtcccaacca
     2401 aggttgatgc cgccgaccca atcaagatcg gcgctgtgtt gccgttctcg ggcggcgtgg
     2461 agctctacgg ccggcaggcc aagctcggtc tcgaccttgc ggcggccgac atcaacgctg
     2521 ccggcggaat cctggggcgg ccggtggaaa tcgtctatcg cgacgatggc acgcggccca
     2581 acattgcgac cgaggcggcg cgcaggatgg tcgaagagga cggcgcgctc gccgtcgtcg
     2641 gccccatcac ctcgcagaat ctcgacgcca ttgtgcccgt gctggcggcg cataagacgc
     2701 cgctgctcta cgccaccaac tacgaaggcg gcaagtgcaa ccgctacatg ttctccttca
     2761 acacggtgcc caaccaggag ctcgactcgc tcttgccgta catgaccaag acattcggcg
     2821 ccgactattt cctgctgggc gccgaccgcg actggccgca tcgcatgttc gacgctgccg
     2881 agccgctgat tgcaaagctg ggcggcaggg tcgtcgccaa gcagtacacc ctgggcagcg
     2941 agaaggattt tacgcccctg atcagccgcg tcgccgacag caaggcgaag gtgctgctgt
     3001 acgcgctgaa gggcgacggc atgcagttca ttccgctcgc ttccgaccgc ggcgtcttca
     3061 agaccatgac cgtggccttc ctcggcctga ccgaagccga cctcaaggcg ttcggcggca
     3121 aggtcgacaa catctacgcg gcggtaccgt ttgtcgtggc gagccaggat cccaaggcca
     3181 aggcgttcgt cgcgcgggcg cgcgccaagg cgggtccgga catggccatc tccaactatg
     3241 tcgagacgca ttacaacacg ctccttgcgg tgaaggccgc cctggagaag gcgggcaagg
     3301 tcgacaagga ggccctgatc gacgcgctcg aaggattgaa gttcgactct cccggcggag
     3361 cggtgaccat cggcaaggat caccacgcga cgctcaacat gttcctggcc aagacccagg
     3421 gggcgaacct ggtcgaggtt caagcgctcg gcgagatcgc cccccgatcg ggctgcaccg
     3481 ccggcgcgct ggcgcgctag aggcgcgcgt catgatcttc cggaccgcgc gcagcttgcc
     3541 ctgagcttgc cgaagggtct cgcgcgctca tgaggatgag cgagccagag gctcgcggtc
     3601 cggaagagca tgattcatct tgtcgtgaag gcgggcggct ggtgcgcggt cagcggcggc
     3661 ggcgggccgt cgaagcgctc gatctcgacc aggcaggtct gggcgatgca gccttggctc
     3721 agcttggagg cgccgatgtc gagggtgagt gcgttggggt tgccatgctt ctccagcggc
     3781 cggttggagc ccgaatcggc cggatcgaac cacgcgccgg tcgacagccg caccacgccg
     3841 cgccggatgc ggtcgctgag acgcgccgcg gcaaggcagg cgccgcggtc gttgaacacg
     3901 cgcaaaaggt cgccgtcggc gatgccgcgc gcggccgcat cgtcgggatg gagcgtgatc
     3961 ggctggcggc ctttgacctt ggtggcgcgc gcatgtgggc tgtggtcgag ctggctgtgc
     4021 agcttgtcgg ccggctggtc tgacagcatg tgcagcggat agcgctcggc cgtcttcgag
     4081 cccagccatt cgatcggctc cagccaggtg gcgtggccgg ggcagtcgtc gtagccgaac
     4141 gacgcgatct tctcggagta gatttctatt ttgcccgacg gcgtcttgag cggattttta
     4201 gcaggatcgg cgcgaaaggc cgccagcatc acgggctcgc ggttcttgcc ttgcgcttcg
     4261 gcgatgccgg cctgccagaa ggcgtcgaac gcggggatgc tcacaccggc ctcggccgat
     4321 ttttggcgcg acagttcata gagatgtttt agccacgcca tggtgtcgcg gccctcggtg
     4381 tagtcgtggc ccttgcccat gcgccgggcg atctcggcga agatccagta gtcgtcgcgc
     4441 gcctcgccca ccgcatcgcg cgccttcttc atggcgatca ggaagggctc gcggctgcca
     4501 tagccgatgt cgtcgcgctc caggctggtg gtggccggca gcacgatgtc ggccatgcgc
     4561 gcggccggcg tccagaactg ctcgtggaac acgatggtct cgggcttgcg ccaggccgtg
     4621 cgcagccggt tgaggtcctg atgatgatgg aagggattgc cacccgccca atagaccagg
     4681 cggatgtcgg gataggtgag gtcgcggccg ttgtagggca gcttgccgcc gggattgagc
     4741 agcatgtcgc agaagcgcgc gacggggatg aagtcgctca ccgcattggt gccctggggc
     4801 agggtcgggc cggaatattt gggaaacccg ctgcccatca ggttgaccgg gccgtaaccc
     4861 acgccgaagc cgccgcccgg caggccgatc tggcccagca tgcaggcaag cgtcaccagg
     4921 gcccagaagg gctgctcgcc gtgatgactg cgctgcagcg accagttgat gctgaccgtg
     4981 gtgcgcgtcg cggccatctc gcgcgccagg ctcgtgatgc ggctggccgg gatgccggtg
     5041 atcttctccg cccaaacggc atccttgccg gcgagggagg ccgcgaactt gtcgaaaccc
     5101 acggtgcagc gatcgaggaa gtcgcggtcg tggagcttct cctgccaaag cgtgtgacag
     5161 agcgccagga tcagggcggc gtcggtgttg ggccggatgg cgagccattc gacgttgccg
     5221 ccggtgtcga gatcgtcggc ggtgggcgtg acgttgacga aacgcacgcc tttgtcgcgc
     5281 atgccgtaga gcccgccctt cacgtgatgc atcgtggcgc caccggcatt gatctggctg
     5341 ttcttgtgcg gcacgccgcc gaaggccacg aacagcttgc aattgtcggc cagcacgtcc
     5401 cacggcgtgt gcatcgacat cagctcgtcc atgggcgcca cgatgtgcgg catcagcacg
     5461 cgcgccgccc ccaggctgta ggaatcctgg tggcgcacat agccgccgac cgaattcagg
     5521 aagcggtgga cctggctctg ggcatgatgg aagcggccgg cgctcgacca gccgtacgaa
     5581 ccgccgaaga tggcgcggtt ggaatgagct tccttcacgc gcgtcagttc gccggcgacc
     5641 aggtcaagcg cctcgtccca cggcagctcg acgaacggct cctggccgcg ccgctcggga
     5701 gccgcgccgg ggcctttttc gagccagctc ttgcgcaccg ccggccggtg cacgcgcagc
     5761 cgcgtcacct cgtcggacag catgtgcagg ccgatcggcg agggatcggg atctttcgag
     5821 aaaggatgca ggcgcttggc cttgccggct tcgtcgtact cgacctcgta gacgccccag
     5881 tgggcagcgg tgagggtgcg ctgatgggtc atgggttact cacacagacc tggcgatgga
     5941 caggaaacgc tcgacgtcgg tgggatcggt gtcgaaggcg gtgaccaggc gaaaggcgcg
     6001 ctcgcccggc cggtccgacg gccagggatg atactgcgcg ccggcggcct gcagcgcgtc
     6061 gtgcatgtgc gccggcagga ccacgaagat ctcgttggcg tcgaccggat agagaagctg
     6121 cgtgcccttg agcggcgtca ggccggcgac cagccggcgc gccatggcat tggcgtggcg
     6181 ggcattgtcg agccacaggc cgtcggccag gtaggcgtcg agctgcgccg acaacaggcg
     6241 catcttcgac aggaggtgtc cgccgcgctt gctgcggaaa gcgaactcgc gcgccaggcc
     6301 ggcatcgaag aacaccacgg cttcggcgct gagcacgccg ttcttggtgg cgccgaggct
     6361 cagcacgtcg acgcccgctt tccaggagag ctcggctggc gagcagccca cgaacgacag
     6421 cgcattggcg aagcgcgcgc cgtccatgtg cagcttgagc ccgtggcgat gcgtcgaggt
     6481 cgcgatagcc gcgatctcct cgggcgcgta gacggtgccg cactcggtcg cctgcgtgat
     6541 gctgacggcc gcgggttgcg ggaaatgcac cacgccgtag accggctggg ccagggcatc
     6601 ggcgagcttc tgcggatcga ccttgccggc cgcaccatcg atacggaaaa gcctcgcacc
     6661 cgacgtaaag aactccggcg cgttggtctc ttcggaggcg atgtgggccg tcgggtggca
     6721 atagatcgcc ccccagggcg gcgtgcagca tgccagcgca aggctgttgg cagcggtgcc
     6781 ggtgatgacc gggaaggcca cgaggtcggg cttgtcgaac agctcgcgca gccggcgttc
     6841 gacccgttgc gtccaatcgt cggctccata ggaatgagcg ggaccgctcg tgaaggcgcg
     6901 gcccaccgcc tcgatgatcg ccgggtgggc gccgacttcg ttgtcgctgc gaaagttcat
     6961 gcctgatcct ctgcccggcg cgttacggcc tcgaggcggt tgccgtcggg atcgcgtacg
     7021 aaagcggcgt aatagtcgga actgtatctc tcgcggatgc cgggcggacc gtcgtcggtt
     7081 ccgccgttgg cgagggctgc ctggtggaag gcgcgcacgg cggcgcggtt tggcgcccgg
     7141 aagcaccaat gccggttatc cgccaccaga ctggccgtgc agagatagac cgagatgtag
     7201 ggcgccgcgt cgggcgtgcg ctcgcgcacg ccgtagccga tcgcctcggc gcggcggttg
     7261 accctgggat agccgagcgc gcccagcacc gcgtcgtaga aagcctgggc gcggtcgagg
     7321 tcggttgtgg tgatcgacag gtgatcgatc atctagcggc cggggcccgg cgggaattcg
     7381 acggtgccca acagggcgcc gttgcgcgga tcgacgatgt aggccgccgc cggcccgccc
     7441 tgcgtctcga catggacgac cagccgatcg cccgccgtcg tcatcgatac cacgcgcgca
     7501 cccgacggca gcgcaatgcg ttcgctgaac gtcccggttg gcggccggcc ggcgttgggc
     7561 gtagacatgc ggcgggcgat ctcggccgcg atgacgacga agcccgccac gatcagcagg
     7621 cccatcacga taaccagcac cttcaaccac agcggtgcag aggcctgagc aggggacgcc
     7681 aagaacactc catgagcgac gccggccgcc acttcgtgac cttcgacgac agcgcctcgg
     7741 gcgagcggct cgaccgtgcg ctggccgcgg ccttgccgtc cctcacgcgc agccgcgtga
     7801 aggcgctgat cgaaagccgc cgcgtggcgc tggcggacgg ccggacgata gaagagccat
     7861 cccgcaaggt caaaacgggc gagcgctttg tcgtcgacat tccggaggct gaaccggccg
     7921 agccgcagcc gcaggcgctc gatctcgaca tcctctatga ggactccgat ctgctggtcg
     7981 tcgacaagcc cgccgggatg gtggttcatc ccgcgccggg caatcccgac aagaccctgg
     8041 tcaatgcgct gctggcccat tgcggcgcga gcctgtcggg catcggcggc gtgcgccgcc
     8101 ccggcatcgt gcatcgcctc gacaaggaca cctcgggcgt catggtggtg gccaagaacg
     8161 acttcgccca tcgggcgctc tccaagctgt tcgccagcca cgacctcacc cgcatctacc
     8221 aggccctcgt ctggggtggc cccaagcaga agcgcggcac catcgaggcg gcgatcggcc
     8281 gccatcccgt cgaccgcaag cgcatgacgg tacccaagag cggcggccgg cccgccgtca
     8341 ccgaatactg ggtcgaacgc catttcgggc cggcgctcaa gcccgtggca agcctgctcg
     8401 gagccaagct cgggaccggg cgcacccatc aggtccgcgt ccatttcgcc caccttggtt
     8461 gcccggtggt gggcgacccg gtctatgggc gaaaggcccg caacgccgct gcgccggagc
     8521 cgttgaaaaa cttcggacgg caggcattac atgcgcagat tctccaattt cagcacccac
     8581 ggacaagaca ggacatgcgc ttcgcctcag aattgcctca agatttcagg aagttggtgt
     8641 ctgaactgaa caccgttaag tattaccttt aatacccgag ggtattagta ggatttggtt
     8701 gacctggagg tcgtccgact tctagactcg gatttagcac tcgatgagtg agagtgctaa
     8761 acgctcgtca ccccgcgtac caaagaaagg ggagctacat gaacgccacc gccaaccttc
     8821 ccgccctgcc gtcgtccctc accccggaag gcaatctcag ccgctacctc caggatatcc
     8881 gcaagtttcc cctgctcgag ccgcaggagg agttcatgct ggccaaggcg tggcgcgaac
     8941 atggggattc caaagccgcc cacaagctgg tgaccagcca tctgcgcctg gtcgccaaga
     9001 tcgccatggg ctatcgcggc tatggcctgc cggtcgccga actgatctcc gagggcaatg
     9061 tcggcatgat gcaggcggtc aagcggttcg acccggaccg cggctttcgc ctcgccacct
     9121 atgccatgtg gtggatccgc gcctcgatcc aggaatacat cctgcacagc tggtcgctgg
     9181 tgaagatggg caccacggcg gcgcagaaga agctgttctt caacctgcgc aagctcaagg
     9241 gccagatgca ggcgatcgag gagggcgacc tctcgcccga gcaggtcacc aagatcgcta
     9301 cccgcctcgg ggtccccgag gaggaggtgg tcaacatgaa ccgccgcctc gccgcgcccg
     9361 attcctcctt gaacgctccg gtcaaggccg agggcgacat ggaatggcag gactggctgg
     9421 tcgacgacac gcccaaccag gagacgcgcc ttgtcgaaag ccaggaactc ggccagcgca
     9481 agcacatgct cgccgccgcc ctgaaacagc tgaccgaccg cgagcgccgc atcatcgtcg
     9541 agcgccggct gatcgatgag cccaagacgc tggaagacct gtcgtccgaa tacggcatca
     9601 gccgcgagcg cgtccgccag atcgaggtgc gcgctttcga caagctgcag aaggcgatga
     9661 agaacatggt ggtcgaggcg gccagcgccg cctcgcgcaa ggtcgaggcg cacgccgcgc
     9721 gctagaccct ctgtctccct atgatcgaag gggccggcat cttccgcgat gccggccctc
     9781 ttcgttttgg cggacctacc ttctccgtcg tacagtcgca gcacagcgag ggaggaagcc
     9841 gtgaccgatg ccattctcta tgagacgccc caggccggaa tcgcccgtat cattctcaat
     9901 cggccgggaa cccggaatgc gcaggacacc gccttgctct atgcgctgaa cgaggccttc
     9961 gatcgcgccg ccctcgacga cgacgtcaag gtgatcgtgc tgtcggccaa cggcccgcat
    10021 ttctcctcgg gccacgacct gcgcgagacc gacggccacg gcaacatgaa gaagcacgcc
    10081 acggtcggca cctggggcgg cttcggcaag cccggcgcgg aagcgcaata tgcccgcgag
    10141 caggaaatct atatcggctt ctgcgagcgc tggcgcaaca tcccaaagcc gacgctggcg
    10201 ctggtccacg gcaaggtgat cgccggcggc ctgatgctga tctggccgtg cgatctcatc
    10261 gtcgcctcgg aggacgccga gttcctcgat cacacggtgg cgatgggcgt gggcggcgcc
    10321 gagttcttcg cccatccctg ggagctgggc gtgcgcaagg ccaaggagtt cctgttcacc
    10381 gccgactgga tgggtgctgc cgaagcgcat cggctgggca tggtgaacca cgtcgtgccg
    10441 cgcgccgagc tcgactcttt cggcatggcc atggccgagc gcattgctca aaagccgctg
    10501 tttgcgctca agctcgtcaa gcaggcggtg aacgccgcac aagatgccca gggcagggtg
    10561 agcgccatgc agacgtcgtt cgcgctgcat cacctggcgc acgcccacaa catgctggcg
    10621 cacggcaagc tcgtcgatcc aacgggcctg atgccggcga tcaaaaagca cgaaaaggcc
    10681 gccgactgag gcgcgagggc caatgacgcg ccactggagc ggcgcgcctc cagcatgtat
    10741 tttgccggca ctatgaccgc acagaacatc gccatcgttg gcgccaccgg cgcggtgggt
    10801 caggaaattc tccgcgtcct cgagcggcgg aacttccccg tcgcttccct gaagctgctc
    10861 gcctcggccc gctcggtcgg caagacgctc gagttcaagg gcaagccgta tccggtcgaa
    10921 gagctgaaag ccgccgcgtt caagggcgtc gacatcgcct tcttcagcgc cggcgccagc
    10981 cgtagccgcg agttcgcgcc ggccgcccgc gccgccggcg ccgtcgtgat cgacaactca
    11041 tcggccttcc gcatggaccc caaggtgccg ctggtggtgc ccgaggtgaa cgcgggcgac
    11101 ctcgcgcgcc atgacgggct gatcgccaac ccgaactgca cggcggccgt cctcgccgtc
    11161 gcggtatggc cgatccacaa ggcggccggc gtgaagaaga tcgtcgtctc gacttatcaa
    11221 gcggcgtcgg gcgcgggtgc ccaggccatg caggagctgg aggaccaggt gcgcgactac
    11281 gccgccggca agccggtcga gcgcaaggtc ttcccgcacc agatcgcctt caacctcttc
    11341 tcgcacaaca ccaaggtggc cgagaacggc tacaacgagg aagagaacaa ggtgatcgaa
    11401 gagacgcgca agatgttcca catgcccgag cttgcggtcg tgccgacctg cattcgcgtg
    11461 ccggtgctgc gcgcccattc cgaggcgatc acgctcgagc tggacaagcc gctgtcgccc
    11521 gaggaggcac gcgccatctt cgcgcgcgcg ccaggcgtca agctggtcga cgatgcagcg
    11581 gccaaccact tccccatgcc gctggaggcc agcggcgatc tcgacatcca tgtcggccgc
    11641 atccgccgcg atctgtccaa tcccaacggg ctggtgctgt tcgtggccgg cgatcagctg
    11701 ctgaagggcg cggcgtggaa cgccgtccag atcgccgagg cgctcggcaa gcccaaggcc
    11761 gtggcggcgg aataggcgct ctgacggaaa ggtgtcagct cgcttgtgcg ggcttgcggt
    11821 ccgtctgcca gagcgcgacg ccaccgcgga ggcccgcctc gttggagacg accgtcacgt
    11881 caggcgccgg ctcgaagtcg agcttcttgg cgttgccgcc gccgatatag aggcggtcga
    11941 agttcgtcag cgttcgaaga ttggcgatcg ccttccgcac gcgcctgttc catcgcacgc
    12001 caccgatcgc cttgcgggcg gcgttgccga gctgctgatc gtaggtctcg ccgttgcgga
    12061 agggatggtg agagagttcg aggtgcggtc ccagccggcc atcgacgtag agacctgtgc
    12121 cgaagccggt gccgagcgtg atgaccattt ccacgccctt gccggcgatg accgccagtc
    12181 cctgcaggtc ggcatcgttg gccacccgca ccggtttgcc gagcgccttg ccgagcgcgg
    12241 cggcgagacc gtagcctttc cagccggtgt tgccgaggtt cggtgccgtc agaacccgac
    12301 cgtcgcgcac gacacccggg aatccgatcg agacgcgatc gtaggcgccg agcggggcca
    12361 ccagaagggc aagcacctcg atgatcttct cgggcggggc gccgaccggc gtatcgatgc
    12421 gcacacgctc aaccagcaat ttgcccgcgt cgtcgatgac cgacgccttg aggcctgtcc
    12481 ccccgacgtc gatcgcaagc gttcgggaac ctccacccga cagggtctcg accagctggg
    12541 cgtccgccat tgagcacttc cttgcgtgtg tggtgccttg ggccggatgc tacgataacg
    12601 ggctttgata ggcgatattc ctgttcatgt ggaaatttcc accgtaatgc gttgccggag
    12661 gactgtgaga tgcttgggaa ttccggcgcc atgcgggtca cggatgatgt gcgagcgagg
    12721 tggtggcccg cctgcctgtc ggcggcggag tttcacgagc atgcccgggc tatccgcagg
    12781 cccttcccca accaaacagg aattgggcaa aactgacgcg agattttaca aaaaatttgc
    12841 agcttttccc aaacatccag ggggatttct aaaaaaagct gcagcccgcc cgaaaatggg
    12901 ctaaaaagag caaagttggg ggtggggagt gtacaaacta acagcaattc tattgtcggc
    12961 ggcaatcctg gtcggctgcc aaccggcgga tcccgtgcaa agggcgtcgc ccgagctgca
    13021 gcgccagtac aacgcggcat tccaagacat gctggataag cccggcgatc tcgccgtggc
    13081 gctcaagtac gccaccgtgg cgaatcaggt cggcgacctc gaaggcgcaa tctcgaccta
    13141 cgaaggcatg ctgctgatcg attccaacct gccgcgggtg aggctggaac tcggcatcct
    13201 gtactatcgc ctcaaatcct atgaagtgtc gcgcacctat ctcgagacgg cgctccagtc
    13261 tcccaccctc cccgcggacg tgcgcaagcc ggccgagcag ttgctgttga agatgccgaa
    13321 gcagtcccgg agccggggcg cgtgaaccac tcacccggga agaggtagag tcatgtccaa
    13381 gtccaatgtc ctcgtcctcc tgctcttgcg cggcctgctt gtcggcgcgg ccgtgctggc
    13441 cctgttcagc accgcgcagg ctcagtcgcg catcggcgtc acccaggcga cggagaacaa
    13501 gccaatgggc aagccgcccg gcggggtcga ccgcgtgctg cgcgtcggga ccgacgtcca
    13561 ggccaacgaa atcatctcca cgtcaaacga ggatcgtgcg cacctggtgt ttctcgacgg
    13621 gacgacgttg acggtcggcc ccaattccca gctcacgatc gacaagttcg tctacgaccc
    13681 gacgacccag aaaggcgagt tggcggtcaa cgccagcaag ggcgtgttcc gcctgatcgg
    13741 cggccggatc agcaagacgg cagcgatcac cgtcaccacg ccgtcgagca cgatgggcat
    13801 tcgcggcggc atcgcggttt ttggcgtcca ggcgtcggcc acgacctcga tcttcgtcta
    13861 tggcaacagc atgacggtga ccgccaacgg cgtgacccag acgatcaccg tgccgggctt
    13921 gcaggtgagc accatcttcg gcggcacgcc gggcacgccg acagtcgtcg tccagggcaa
    13981 cctcagcacg gcgctggcca ccctcgcggg caacgcccag gcggccgcag cgacgctcct
    14041 cgcgatcaac acactcgtcg cggacaacgc cggcaacgca gtcacgctgc aggccctcat
    14101 acaagcgatc atcaatgtga atgcgcctag caccctcacc acgaccttca acacgcagtt
    14161 gaacgtaata acggtcgtcg aaaatccgaa tcagacgcag gccagtccca actgacaacg
    14221 accattgcgc gccactccgt ggcgctcatg agctgtcgat agcgaaagat acgccacgtc
    14281 agcgcggagg ttacgccacg ggcagtggcg cgctcccggc gatcagatcc tttcgatcac
    14341 cgctttcctg aagcggccca tttcggcgat cacttcgacg gcggtcgggc ggccgaaatc
    14401 gaagtcgatg gcggtgacgc cggcattccg caaatcccgc aagtcggcaa cgatgtcgga
    14461 gtcgctgccc gagaacagcc gccgctcgcc gtccgaggcg acggccggca ctaccgcgcc
    14521 atagcgcttg acgcgatagc cgacgccgac tgaaccgggg tcgcggccgg catcggcggt
    14581 ggccttgcgc aggcgggcga tgccggcatg gaggcgcggc agcgtgtcga gcaggtgctt
    14641 gttgttggag ccgatcggat accaggcggc gccgacgcgg gcggcgcggc ggagcgcggg
    14701 gccgccctcg ccgccgaccc agatcggcgg gtgcgggcgc tggacgggct tgggctccag
    14761 gacgatgccg tcgaagcgcg tgtagcggcc gcaaaagcgc ggcgcgcgtt cggtccacag
    14821 cacgcggaag gcgtcgatat actcgtcggt caccaacccg cgctcggcga agggcgggcc
    14881 gacgacggca tcgaactccg tcttcagcca gccggcaccg atgcccacga ccagccgccc
    14941 gccggacaac acgtcgagcg tggccagcat cttggcggcc agcacggcgg gacgatgcgg
    15001 caccaccagc accgccgcga ccaggcgaat gcgc
//
LOCUS       DASWGA010000468         3016 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1576564, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000468 DASWGA010000000
VERSION     DASWGA010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3016
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576564"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2302
                     /locus_tag="VF991_11220"
     CDS             <1..2302
                     /locus_tag="VF991_11220"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3772 domain-containing protein"
                     /protein_id="HEX9557060.1"
                     /translation="TSQLDRIASRGEQPNLLPAEIDAMREQVVDVRTAASAAAALARG
                     DLADTRKLLAPLEVKPATDTGPESNAVKAERERLTAQAAESENRVKQCEVVIARADQL
                     LERMTKVRGQVMLQTLLHRDVSPLSPEVWSKLGPQFTEAVQTLSAAMVAWSDEGLSRL
                     HFDDRDLVALAAWAVATVVLWWLGRVLRHYYGRGEATEPGQRDRTIAAAIDGVGLVLV
                     PILAVWLIGKLLAATSPPPPIDTLVPELIVRVIAFLLVIGLTATALSPARPNWRVLPF
                     TDESAHLLSTALRRLMAVGLSVDIVYVTLTRSGGNHDALSAVGALVLATIVALLALPT
                     LATRAWHAARPDGSELPTVIGGTWWSIARLALSVVVLSAILFALLGYATLAAHLHTAV
                     YTTCLLIAVAILLHRLVGDLLEAAAAPDTRPGKWVRHRLGLAPDSTLRGQHLLILLFD
                     LILVVSLAIAIPAAWGVDTDAILDGMGQLMRGVRVGGVTISLGNIGMAILAFGVCIGI
                     ARLVRSVVRNRVLPTVDVSLPLRQSIDAGLNYAGVVIAILIGIGALGIDFTNLAIVLG
                     ALSVGIGLGLQNIANNVISGVFLLVERPIKAGDWVVVNGHEGFVRRINIRATEIETFQ
                     RTHVIMPNSMFLQNPVVNRTYSDTSSRVEIALTVPLATDVAAMETVLREAALGHPRVL
                     RVPVPIVRFVRITPTGLDFELFVFVARLEDRLIVANDLNKAILDKMIELKIVDPNPIP
                     AFKLHGIEHLAKAGSAQSDGHAAPAP"
     gene            2283..>3016
                     /locus_tag="VF991_11225"
     CDS             2283..>3016
                     /locus_tag="VF991_11225"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9557061.1"
                     /translation="MPRRRRRDPALRRRWPFILLFAMGVLAGVALWAYSPSLPSEMLI
                     ARYADDRSKFIDVGGVRAHVREQGNPDGIPVLLIHGSMGSLHMWEGWARELGQQARLI
                     SVDLPGHGLTGAWPRDEYTVEAYADFIEVLVDTLNLDRFVLVGHSLGGAVAWSFAATR
                     PNRVSQLVLVDAAGYPRDGGEAPLPTRLARLPVVGDIGIYFKPDWMVRRALTEIYTDP
                     ALITPDRVRRFGELQRFPGNRPATLLR"
BASE COUNT          418 a         1075 c         1009 g          514 t
ORIGIN      
        1 gacgagccag ctcgaccgca tcgccagtcg cggcgagcag cccaacctct tgccggccga
       61 gatcgatgcc atgcgcgagc aggtggtcga cgtgcgcacc gccgccagcg cggcggcggc
      121 gctcgcccgc ggcgacctcg ccgatacccg caagctcctg gcgccgctcg aggtcaagcc
      181 ggcaaccgac acgggccccg agtcgaacgc cgtgaaggcc gagcgcgagc gactgacggc
      241 ccaggcggca gaaagcgaga accgggtcaa gcaatgcgag gtggtgatcg cccgcgccga
      301 ccagctgctc gagcgcatga ccaaggtgcg cggccaggtg atgctgcaaa ccctgctgca
      361 tcgcgacgtc tcgccgctgt cgcccgaggt ctggagcaag ctcgggccgc aattcaccga
      421 ggcggtgcag acgctgtcgg ctgccatggt cgcctggagc gacgaaggat tgagccggct
      481 ccatttcgac gatcgcgatc tcgtggcgct cgctgcctgg gcggtcgcga ctgtggtgct
      541 gtggtggctc ggccgcgtgc tgcgccatta ctacggccgc ggcgaggcga ccgagcccgg
      601 ccaacgcgat cgcaccatcg ccgccgccat cgacggcgtc ggcctggtgc tggtgccgat
      661 cctcgccgtt tggctgatcg gcaagcttct ggcggcaacg tcgccgccgc cgccgatcga
      721 cacgctggtg ccggaattga tcgtccgcgt catcgccttc ctgctggtga ttggcctcac
      781 cgccacggcg ctgtcgccgg cgcggccgaa ctggcgggtg ctgccgttca ccgacgagag
      841 cgcgcatctg ctgtcgaccg ccctgcggcg gctgatggcg gtgggattgt cggtcgacat
      901 cgtctacgtc acgctgaccc gcagcggcgg caaccacgac gccctctcgg cggtgggcgc
      961 cctggtcctg gccacgatcg ttgccctgct cgccctgccg acgctggcga cgcgcgcctg
     1021 gcatgccgcc cgtcccgacg gctcggagct gcccaccgtg atcggcggca cctggtggtc
     1081 gatcgcgcgc ctggcgctga gcgttgtggt gctgtcggcc atcctcttcg cgctgctggg
     1141 ctatgcgacg ctcgccgccc acctgcacac cgcggtctat acgacctgcc tgctgatcgc
     1201 cgtcgctatt ctgctgcacc gcctggtcgg cgacctgctc gaagccgccg ccgcgcccga
     1261 cacgcggccg ggcaaatggg tgcgtcatcg cctcggcctg gcgcccgatt cgaccctgcg
     1321 cggccagcat ctcctgatcc tgctgttcga cctgatcctg gtggtgtcgc tggcgatcgc
     1381 cattccggcg gcgtggggcg tcgacaccga cgccatcctc gacggaatgg gccagttgat
     1441 gcgcggcgtc agggtgggcg gcgtcaccat ctcgctgggc aacatcggca tggcgatcct
     1501 cgccttcggg gtctgtatag ggatcgcccg cctggtgcgc agcgtcgtgc gcaaccgcgt
     1561 gctgcccacc gtcgacgtgt cgctgccgct gcgccaatcg atcgatgccg gcctcaacta
     1621 tgccggcgtc gtcatcgcca tcctgatcgg catcggcgcg ctcggcatcg atttcaccaa
     1681 tctcgccatt gtgctgggcg cgctatcggt tggtatcggc ctcggcctgc agaacatcgc
     1741 caacaacgtc atctcgggcg tctttctcct ggtcgagcgg ccgatcaagg ccggcgactg
     1801 ggtggtcgtg aacggccacg agggcttcgt gcggcgcatc aacatccgcg ccaccgagat
     1861 cgagaccttc cagcgcaccc acgtcatcat gcccaacagc atgttcctgc agaacccggt
     1921 ggtgaaccgc acctattccg acacgtcgag ccgagtggag attgcgctga ccgtcccgct
     1981 ggcgaccgac gttgcggcga tggagaccgt gctgcgcgag gcagccctcg gccatccgcg
     2041 cgtgctgcgc gtgcccgtgc ccatcgtgcg cttcgtgcgc attacgccca cggggctcga
     2101 cttcgagctg ttcgtgttcg tcgcccggct cgaggatcgc ctgatcgtcg ccaacgatct
     2161 caacaaggcg atcctggaca agatgatcga gctcaagatc gtcgatccca atccgattcc
     2221 cgcgttcaag ctgcatggca tcgagcacct cgccaaagcc ggcagcgcgc agagcgatgg
     2281 ccatgccgcg ccggcgccgt agggatcctg cgctgcgccg gcgctggccg ttcatcctgc
     2341 tgtttgcgat gggcgtgctg gccggcgtgg cgttgtgggc ctattcgccc tcgctgccat
     2401 ccgagatgct gatcgcgcgc tacgccgacg accgctcgaa gttcatcgac gtcggcggcg
     2461 tgcgcgccca tgtccgcgag cagggcaatc ccgacggcat tccggtgctg ctgatccacg
     2521 gctcgatggg ctcgctgcac atgtgggagg gctgggcgcg cgagctcggc cagcaggcgc
     2581 ggctgatctc ggtcgacctg cccggccatg gcctgaccgg cgcctggccg cgcgacgaat
     2641 acaccgtcga ggcctacgcc gatttcatcg aagtgctggt agacaccctc aatctcgacc
     2701 gcttcgtctt ggtcggacac tcgctgggcg gcgccgtcgc ctggagcttc gccgcgacgc
     2761 ggcccaaccg ggtgagccag ctcgtcctgg tcgatgcggc gggctatccg cgcgacggcg
     2821 gcgaggcgcc cctgccgacg cggctggcgc gcctgccggt ggtaggcgac atcggcatct
     2881 acttcaagcc cgactggatg gtgcgtcggg cgttgacgga gatctacacc gacccggcac
     2941 tgatcacgcc cgatcgcgtg cgccgattcg gcgagctgca gcgctttccc ggcaaccggc
     3001 cggccaccct gctgcg
//
LOCUS       DASWGA010000469         1694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_432115, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000469 DASWGA010000000
VERSION     DASWGA010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432115"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            212..1252
                     /locus_tag="VF991_11230"
     CDS             212..1252
                     /locus_tag="VF991_11230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018064456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557062.1"
                     /translation="MRQLGSSKIRRRSLLKSGAAATGFAAAGLLPSGGFAQAKTQTVN
                     LQLGWLAGNNQVGEVAAKHLGYFEEEKLNLAIQPGGPSIDGVAIVASGRHEIGQVSSS
                     PSLMLAASQKIPVMCFATGLQQHPYAYFSLPKKPVRTAKDLVGKKVGIQATAKVLLNA
                     LMKKHNIAEKDVEIVIIGSEMTPILTGQTDVVSGWITNTTTLKPLGPDRIDLRLWDAG
                     VRLYALPYYATKDTIEKKADMLAAYTRAASRGWEYALKNPEKAAAFLVKEYPNLNLAD
                     EVEGSKVLLTFAFNANTQANGWGAFDPKVWQDQITLYDELKQFTAGAPKLQDVMTTKI
                     LDATKSVRAKVG"
     gene            1261..>1694
                     /locus_tag="VF991_11235"
     CDS             1261..>1694
                     /locus_tag="VF991_11235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557063.1"
                     /translation="MAVALARKDPAPAASADAVVCERVTVRFTTERGTVTALENIDLT
                     IPRGSFLTLLGPSGCGKSTLLRVLADLIEPTSGRIAVLGDVPATARQNREIGFVFQDA
                     ALLPWRSVMENVTLPLEVGGGKALPGARAPQELLALVGLTGW"
BASE COUNT          311 a          583 c          549 g          251 t
ORIGIN      
        1 cgaggaggcg acgctcagcg catcggcggc cttgcggatc gagccgtgac gcgcgacatg
       61 atcgaaatag cgcaggaccg cggcatgcat ggcgattcgt ccctctggcg ggcgatgcca
      121 aaacggcagc ggaccgcgcg aattaatgtt cttttctaga gcacccggcg tcaatagcgt
      181 tggcacgggg aacgacgaag gggaagtcgc catgcgccag ctcggttcca gcaagatccg
      241 ccgccgctcg ctgctcaaat ccggggccgc cgccaccggt ttcgccgccg ccggcctttt
      301 accgtcgggc ggcttcgccc aggccaaaac tcagaccgtc aacctccagc tcggctggct
      361 cgccggcaac aaccaggtgg gcgaggtcgc ggccaagcat ctcggctact tcgaggagga
      421 gaagctcaac ctcgcgatcc agccgggcgg acccagcatc gacggcgtgg ccatcgtcgc
      481 ctcgggccgg cacgagatcg gccaggtgtc gtccagcccc tcgctgatgc tggcggcgtc
      541 gcagaagatc ccggtgatgt gcttcgccac cggcctgcag cagcatccct acgcctattt
      601 ctcgctgccc aagaagccgg tgcgcacggc caaggacctt gtcggcaaga aggtcggcat
      661 ccaggcgacg gccaaggtcc tgctgaacgc gctgatgaag aagcacaaca tcgccgagaa
      721 ggacgtcgag atcgtcatca tcggctcgga gatgacgccg atcctgaccg gccagaccga
      781 cgtggtgagc ggctggatca ccaacaccac gaccttgaag ccgctcggcc cggaccgcat
      841 cgaccttcgc ctgtgggacg ccggcgttcg gctctatgcg ctgccctact acgccaccaa
      901 ggatacgatc gagaagaagg ccgacatgct ggccgcctac acccgcgccg cctcgcgcgg
      961 ctgggaatac gcgctcaaga accccgagaa ggcggcggcg ttcctggtca aggaatatcc
     1021 caatctcaac ctcgccgacg aggtcgaggg cagcaaggtg ctgctcacct tcgccttcaa
     1081 cgccaatacc caggccaatg gctggggcgc cttcgatccg aaggtctggc aggaccagat
     1141 cacgctctac gacgagctga agcagttcac cgccggcgcg cccaagctgc aggacgtgat
     1201 gaccaccaag atcctcgacg ccaccaagag cgtgcgcgcc aaggtgggct gagccgggcg
     1261 atggccgtcg cgctcgcgcg caaggatccc gcaccggctg ccagcgccga cgccgtcgtc
     1321 tgtgaacgtg tcacggttcg cttcacgacc gagcgcggca cggtaacggc gctcgagaac
     1381 atcgacctca cgatcccgcg cggcagcttc ctgaccttgc tcggaccctc gggctgcggc
     1441 aagtcgacct tgctgcgcgt gttggccgat ctgatcgagc ccaccagcgg gcggatcgcg
     1501 gtgctgggcg acgtgccggc gacggcgcgg caaaatcgcg agatcggctt cgtcttccag
     1561 gacgcggccc tgctgccatg gcgcagtgtc atggaaaacg tcacgctgcc gctcgaggtc
     1621 ggcggcggca aggcgctgcc cggcgcccgc gcgccgcagg aactgctcgc gctggtcggc
     1681 ctgaccggct ggga
//
LOCUS       DASWGA010000470         4511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1955740, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000470 DASWGA010000000
VERSION     DASWGA010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4511
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1955740"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1159)
                     /locus_tag="VF991_11240"
     CDS             complement(<1..1159)
                     /locus_tag="VF991_11240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9557064.1"
                     /translation="MIAETLTRLEGEFDYIVVGAGSAGCVLANRLSADARSRVLVLEA
                     GGRDNWIWYHIPVGYLFAIGNPRSDWMFQTEKEPGLNGRSLSYPRGKVIGGCSAINAM
                     ISMRGQAQDYDHWRQLGLSGWGWDDVRSVFKRLDHHFLGDTEHHGAGGEWRVEQPRVK
                     WDVLDAVAKAATEMGIPETSDFNTGDNSGVGYFHVNQKRGFRWSSARAFLKPVLGRPN
                     LRLETGVLVEKVLLDGKRAVGVQFRQNGQLFEARARGEIILSAGSVGSPLILQLSGVG
                     PAEWLSELGIAVLHDKPGVGRNLQDHLQQRAIFKVEGVKTLNETYHSLVGRALMGAEY
                     ALFQKGPLTMAPSQLGIFTRSSPEHERPNIQFHVQPLSLDKFGDPLHRFPAI"
     gene            complement(1156..1587)
                     /locus_tag="VF991_11245"
     CDS             complement(1156..1587)
                     /locus_tag="VF991_11245"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX9557065.1"
                     /translation="MKGSCLCSAVAYEVSRPAAGLHIGLCSCRSCRKAHAAPFNVYAS
                     VPRENFRWLRGEDKTRIYESSPGKNRHFCSVCGSQLVAEYPGESNLLLRVALLDEDPG
                     ARPVEHIFRSQQVPWCDWESDAIARYEEWGPSGEPTARNTQ"
     gene            complement(1601..2449)
                     /locus_tag="VF991_11250"
     CDS             complement(1601..2449)
                     /locus_tag="VF991_11250"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9557066.1"
                     /translation="MGKMTGRVAIVTGASRGIGQAIAELLAREGAKVVCVARTLNEGD
                     HPLKGSLGSTVAEIRAAGAEATAVAADISSESECLKLVEAARATYGRIDTLVNNAALN
                     YYIPTADYPTNRWIKAFAVNVHAPFMLAKTVLPDMIAAGRGAIVNIGSGAAIGPGRGP
                     YADQAVRGGVMYGASKAALERFTQGLAQEVARHGGIAVSCVSPSRVVPTPGTVYHKLV
                     DGLDDPRGEPPSMMARAALLLASEPADKVNGRVTYSQQILKEFGWIEKGVGRGINTVG
                     SGYSQV"
     gene            2535..3677
                     /locus_tag="VF991_11255"
     CDS             2535..3677
                     /locus_tag="VF991_11255"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557067.1"
                     /translation="MLYNRISADCHLDLPWMPPDLFTSMASREMKERMPFVVESDEGP
                     KWTAKNGASFGFKNGVGPAGSKYVPGKHHRVDVMAETGLYADGAKDIRRVSDPHLRIK
                     DLDRDGVDAEVIYGILGAAGRLNDKDASNEMLRIYNDWLKDFCSHYPDRHIGLACLPY
                     GDIDAAVKEIYRVAKLGIKGLELSCSWDMEPMWHPMWEPLWKAVNDVQLPLHFHTFPA
                     VPPDTIQKHGGRVGRSVFFTVVSGFQMNLVNILAAIIGANVLERYPHIRIAFGESGCG
                     WIPYALDRMDFEWEDRFTDLGLKMKPSDYWRRQCKATFQFDRIGTKLIDDMGAESLMW
                     GSDYPHGDGVWPHSDQYIKEQFAEVSPEVTRMITCTNAGKFYGLIN"
     gene            3854..>4511
                     /locus_tag="VF991_11260"
     CDS             3854..>4511
                     /locus_tag="VF991_11260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX9557068.1"
                     /translation="MAAPGSIRIRSWLFTPATHPDRFAKAAEAGADVAILDLEDAVAP
                     KDKARARTTALEYLAGSPIADTRHALRINGLDTRAGISDLDSLLDSKAAPDFLVLPKT
                     ETAGHLQILDRLLTSAGKDARLIGLIESARGLADVEAIASATPRLAGLMLGAADMAAD
                     LGAAGSWQPLAFARGRLVAACALAGVTPIDSPFFDLHDEPGLKQEVAAAVAMGFPAKA
                     A"
BASE COUNT          778 a         1491 c         1475 g          767 t
ORIGIN      
        1 ttatcgccgg gaagcgatgc aagggatctc cgaacttgtc gagcgacagc ggctggacat
       61 ggaactggat gttcggccgt tcgtgctccg gcgaggatct ggtgaagatg ccgagttggg
      121 aaggcgccat cgtcagcggg cccttctgga aaagggcgta ttcggcgccc atcagggcgc
      181 ggccgaccag agaatgatag gtctcattga gcgtcttgac gccctcgacc ttgaagatcg
      241 cgcgctgctg gagatggtct tgcaggttgc ggccgacgcc gggcttgtcg tgcaggacgg
      301 cgatgccaag ctcgctgagc cactcggctg gaccgacccc ggagagctgc aggatcagag
      361 gcgagccgac agatcccgcc gacaggatga tctcgcccct ggcgcgcgcc tcgaagagct
      421 gcccgttctg ccggaactgg acgccgacag cgcgcttgcc gtccagaagc actttttcga
      481 ccagcacgcc ggtttcaagg cggagattgg gccggccaag aacgggcttg agaaaggcgc
      541 gagccgaaga ccagcggaag ccgcgcttct ggttgacgtg gaagtaaccg actccgctgt
      601 tgtcgccggt gttgaaatcc gacgtctccg ggatgcccat ttccgtcgcc gccttggcaa
      661 ccgcgtccag tacgtcccat ttcacgcgcg gctgctcgac gcgccactcg ccgcccgcgc
      721 cgtgatgttc ggtgtcgccg agaaagtgat gatcgagccg cttgaagacc gaacggacat
      781 cgtcccagcc ccagccggag aggccgagct ggcgccagtg gtcgtagtcc tgcgcctggc
      841 cccgcatcga gatcatggca ttgatggccg agcagccgcc gatcaccttg ccgcggggat
      901 agctgaggct gcggccgttc agacccggct ccttctcggt ctggaacatc cagtcggagc
      961 gcggattgcc gatggcgaac aggtagccca ccgggatgtg gtaccagatc cagttgtcgc
     1021 ggccgcccgc ttccagcacc agaacccgcg agcgggcgtc cgctgaaagg cgattggcca
     1081 gcacgcagcc ggccgagccc gcaccgacga cgatgtaatc gaactcccct tcgagacgag
     1141 taagggtttc agcaatcatt gcgtgttcct ggcagtcggt tcacctgatg gaccccattc
     1201 ttcatatcgc gcgatagcgt cgctttccca gtcgcaccat gggacctgct gactgcggaa
     1261 gatgtgctcg actggccgcg ctccggggtc ctcgtcgagc aatgcgacac gcagcaggag
     1321 attggactcg cctggatact cggcgacgag ctgagaaccg cagactgagc agaaatgacg
     1381 attcttgccg ggcgaagact cgtaaatgcg ggttttgtcc tcgccgcgca gccaccggaa
     1441 gttctcacgc ggaacggaag cgtagacgtt gaagggcgct gcgtgcgcct tacgacagga
     1501 acggcaggag cacaggccga tatgcaggcc ggccgccggg cggctcacct cataggcgac
     1561 ggcgctgcag agacagcttc ctttcatcac gatgcctcct tcagacctgc gaatagccac
     1621 tgccgacggt gttgatgccg cggccgacgc ccttttcgat ccagccgaac tccttgagga
     1681 tctgctggct gtaggtcacg cggccgttca ccttgtccgc cggctcgctg gccagcagca
     1741 gcgcggcgcg cgccatcatc gacggcggct cgccgcgcgg gtcgtcgagg ccgtcgacca
     1801 gcttgtgata gacggtgccg ggcgtcggca cgacgcgcga cggcgacacg cagctcacgg
     1861 cgataccgcc atgccgcgcc acttcctggg ccagtccctg cgtgaagcgt tcgagggcgg
     1921 ctttgctcgc gccgtacatc acgccaccgc ggacggcctg gtcggcatag gggccgcggc
     1981 cgggcccgat cgccgctccc gacccgatat tgacgatggc gccgcggccg gcggcgatca
     2041 tgtcgggtag caccgttttg gcgagcatga agggcgcatg gacgttgacg gcaaaggctt
     2101 tgatccaccg gttggtcgga tagtcggccg tcgggatgta gtagttgagc gcggcgttgt
     2161 tcaccagcgt gtcgatccgt ccgtaggttg cgcgcgccgc ctcgaccagc ttcaggcact
     2221 cgctttcaga cgatatgtcg gcggcaacgg ccgtcgcctc cgcgccggcg gccctgattt
     2281 ccgccacggt gctgcccagc gagcctttta gcgggtggtc gccctcgttc agggtgcgcg
     2341 ccacgcacac gaccttggcg ccctcgcgcg ccagcagctc ggcgatggcc tgcccaatgc
     2401 cgcggctcgc cccggtgaca attgcgaccc gtcccgtcat cttgcccatc gcggtctccc
     2461 tttgactgtc gaaatctggc ccttgccgga acggccggcg ggcgcgcaca attcgggcaa
     2521 taagggagct ccgcatgctg tacaaccgca tttcggccga ctgccacctc gacctgccct
     2581 ggatgccgcc cgacctgttc acgtcgatgg cgtcgcgcga gatgaaggag cgcatgccgt
     2641 tcgtcgtcga gagcgacgag gggccgaaat ggacggcgaa gaacggcgcc tcgttcggct
     2701 tcaagaacgg cgtcggcccg gccggcagca agtatgttcc cggcaagcat cacagggtcg
     2761 acgtcatggc cgagaccggc ctctatgccg acggcgccaa ggacatccgc cgcgtttccg
     2821 acccgcacct gcgcataaag gatctcgatc gtgacggcgt cgacgccgag gtgatctacg
     2881 gcatcctggg cgccgcgggc cggctgaacg acaaggacgc ctccaacgag atgctgcgca
     2941 tctacaacga ctggctaaaa gatttctgca gccactatcc ggatcggcat atcgggctgg
     3001 cctgcctgcc ctacggcgac atcgacgcgg cggtgaagga gatctaccgc gtcgccaagc
     3061 tcgggatcaa aggcctcgag ctttcctgct cgtgggacat ggagccgatg tggcacccga
     3121 tgtgggagcc gctgtggaag gcggtgaacg acgtgcagct gccgctgcac ttccacacct
     3181 tcccggcggt gccgcccgac accatccaga agcacggcgg acgggtcggc cgctcggtgt
     3241 tcttcaccgt cgtgtcgggc ttccagatga acctggtgaa catcctggcc gccatcatcg
     3301 gcgccaacgt gctggagcgc tatccccaca tccgcatcgc cttcggcgag agcggctgcg
     3361 gctggatccc ctacgcgctc gaccgcatgg acttcgaatg ggaggaccgc ttcaccgacc
     3421 tcggcctgaa gatgaagccc tccgactact ggcgccgcca gtgcaaggcc accttccagt
     3481 tcgaccgcat cggcaccaag ctgatcgacg acatgggggc ggagagcctg atgtggggct
     3541 ccgactaccc gcacggcgac ggcgtgtggc cgcattcgga tcagtacatc aaggagcagt
     3601 tcgccgaggt gtcgcccgag gtgaccagaa tgatcacctg caccaacgcc ggtaaattct
     3661 acgggctgat caactagggc gcgggtgctc gcatcaccgt ccccgcgatg atgtcgcgaa
     3721 ggcgggcgac gtttcctgcc cggtggtcgg cgtcccgcgt gaagtaacct ttccccactc
     3781 cggccaggaa atggccggta tggcgtagtt cagtgtcgtt tcaaaaaatc gtgtgcgaga
     3841 ggaagaagcg ccaatggccg ctccgggatc gattcgcatt cgaagctggc tgttcacgcc
     3901 ggcaacccat cctgaccgtt tcgccaaggc ggccgaggcc ggcgccgatg tcgcgatcct
     3961 ggacctcgag gatgccgtcg cccccaagga caaagcgcgc gcccgaacga ccgcgctcga
     4021 atatctggcg ggcagcccta tcgctgatac gcgtcacgcg ctgcgcatca acgggctcga
     4081 cacgcgggcc ggcatttccg acctcgactc gctgctcgac tcgaaggccg cgccggactt
     4141 tctggtgctg cccaagacgg agacggccgg tcacctccaa atcctcgacc ggctgctgac
     4201 cagcgcgggc aaggatgcaa ggctgatcgg cctgatcgag agtgcgcgcg gcctcgccga
     4261 cgtcgaagcg atcgcgagcg cgacccctcg gctcgccggc ctgatgctgg gcgccgccga
     4321 catggcggcc gatctcgggg cggccggctc atggcagccg ctcgccttcg cgcgtggacg
     4381 gctggtggcg gcctgtgcgc ttgccggcgt gacgccgatc gattcgccct tcttcgatct
     4441 gcacgacgag cccggcctca agcaggaggt cgccgcagcg gtggcgatgg gcttcccggc
     4501 caaggccgcc a
//
LOCUS       DASWGA010000471         1574 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1820510, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000471 DASWGA010000000
VERSION     DASWGA010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1820510"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VF991_11265"
     CDS             <1..511
                     /locus_tag="VF991_11265"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557069.1"
                     /translation="YAYTTYSHKEAPTAVAGTSSPAAPVTADASVKSVRDRVGEYLAT
                     KPTPEAMLAKARDFAKAGDFGAAFLVFRHAAEMGNAAAQLELAAFYDPLATPPKAGFT
                     PDSLRAADWYERAALAGSAEAQRKLGLLLAKGGAGLPADPAKAKTWLQQAAAQNDTDA
                     KKALDGLPK"
     gene            complement(519..815)
                     /gene="cyoD"
                     /locus_tag="VF991_11270"
     CDS             complement(519..815)
                     /gene="cyoD"
                     /locus_tag="VF991_11270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008189660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HEX9557070.1"
                     /translation="MEHDRGSYIVGFVLAVILTAIPFALVATHALAPSTTMLVIAVAA
                     VLQILVHLRFFLHLNFISTPRENLLAIAFTAILLFLMVGGSFWIMIDLHTRMAI"
     gene            complement(815..1423)
                     /gene="cyoC"
                     /locus_tag="VF991_11275"
     CDS             complement(815..1423)
                     /gene="cyoC"
                     /locus_tag="VF991_11275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008550850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HEX9557071.1"
                     /translation="MNANVTAVPSHHEPEASDAYEQRALGFWLYLMGDAVIFGLLFMT
                     YGIMVGNTAGGPAGKALFSLNNAALETALLLVSSTTFGFASLAAREANRSAVLGWLLV
                     TFVLGAGFIFLEIREFLGLIAAGVGPDRSGFLSAFFTLVGTHGTHVSVGLIWILIMSG
                     QVFFKGLRVSVTSRLFRLGLFWHFLDIAWVGIFSVVYLPGLL"
BASE COUNT          314 a          509 c          545 g          206 t
ORIGIN      
        1 ctacgcctac acgacctatt cccacaaaga ggcgccgacc gccgttgccg gaacttcgtc
       61 gcccgccgcg ccggtcacgg ccgacgcctc cgtcaagtcg gtgcgcgaca gggtgggcga
      121 gtatctggcg accaagccca cgcccgaggc gatgctggcc aaggcccgcg acttcgccaa
      181 ggcgggcgat ttcggcgcag cgttcctggt gttccgtcac gccgcggaga tgggcaatgc
      241 cgcagcccag ctcgaactcg cggccttcta cgatccgctg gcaacgccgc ccaaggccgg
      301 cttcacgccc gacagcctgc gcgccgccga ctggtacgaa cgtgccgccc tcgccggttc
      361 ggccgaggca cagcgcaagc tcggcctgct gctggccaag ggcggtgcgg gattgccggc
      421 cgatccggcc aaggccaaga cctggctgca gcaggcggcg gcgcagaacg atacggacgc
      481 caagaaggcg ctggacggcc tgccgaagta acgccggcct agatcgccat gcgggtgtgc
      541 aggtcgatca tgatccagaa gctgccgccc accatgagaa aaagcaggat ggccgtgaag
      601 gcgatggcca gcaggttctc gcgcggcgtc gagatgaagt tgagatgcag gaagaagcgc
      661 agatggacca ggatctgcag caccgccgcc acggcgatga ccagcatggt ggtcgagggc
      721 gccagcgcgt gggtggcgac cagcgcgaag gggattgccg tcaggatgac ggcgagcacg
      781 aagcccacga tataggagcc gcggtcgtgt tccatcacag gagtcccggc aggtagacga
      841 cggaaaagat gccgacccag gcgatgtcga ggaagtgcca gaacaggccg agccggaaca
      901 gccgcgaggt caccgacacc ctcagtccct tgaagaagac ctggccgctc atgatcagga
      961 tccagatcag gccgacgctg acatgggtgc cgtgggtgcc gaccagggtg aagaaggccg
     1021 aaaggaagcc gctgcggtcg gggccgacgc cggcggcgat caggcctaaa aactcgcgga
     1081 tctcgaggaa gatgaagcct gcccccagca cgaaggtcac cagcagccag cccagcacgg
     1141 ccgatcggtt ggcctcccgt gcggccagcg aggcgaagcc gaaggtggtg ctgctgacca
     1201 gcagaagcgc cgtctcgagg gcggcattgt tcaggctgaa caacgccttg ccggccggcc
     1261 cgccggcggt gttgccgacc atgatgccgt aggtcatgaa caacaggccg aaaatgacgg
     1321 catcgcccat caggtagagc cagaagccga gcgcgcgctg ctcgtaggcg tccgatgctt
     1381 ccggctcgtg gtggctcggg acggcggtga cgttggcgtt catggacggc tttcgagcgc
     1441 gcggtagcgc gcctcctcga tgcgcgccac ctcggcggcg accagcacga attccgactc
     1501 gtcatcggag gcgcgcagga tgagggcgat ccacatggca agcccgcaca ggatcaccag
     1561 ccaccagatg tgcc
//
LOCUS       DASWGA010000472         5521 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2083721, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000472 DASWGA010000000
VERSION     DASWGA010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5521
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2083721"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..474)
                     /locus_tag="VF991_11280"
     CDS             complement(<1..474)
                     /locus_tag="VF991_11280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008190280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX9557072.1"
                     /translation="MSFRALVLSQGADRKVSGVIETLPDDKLPAGDVTVAVEYSTLNY
                     KDGLVLTTGGGLVKTWPHVGGIDFAGTVERSDNPGFKPGDKVVLNGWRVGELHWGGYA
                     TKARVKGDWLVKLPAAISSKRAMAIGTAGYTSMLCVMALEKHGLKPAAGDILVTGA"
     gene            920..1711
                     /locus_tag="VF991_11285"
     CDS             920..1711
                     /locus_tag="VF991_11285"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HEX9557073.1"
                     /translation="MRGALPAEHLFIGHTVCPGFADLGAKIDWWRRTAFHVPGYDYLH
                     EGMNYRYTPVELAPYRYTPIRVPALERSAKQGHGQRIVLVYRNPLDQAASYYRYCQNH
                     RDPAYNTYKGRPLTTVPFHEYLFECALFSYAKQFLSFQILAARHPDLVGLLPYERLMS
                     RPVEVMTDVLDHLSGAPANRPALGDALWLARSEHMKAIERELGRSLDGTRNGHRSHIR
                     QANARRRDDWFDDATRSEAMTVLRVRGVDLDLFEWPATTKAASAA"
     gene            1784..2722
                     /gene="cysD"
                     /locus_tag="VF991_11290"
     CDS             1784..2722
                     /gene="cysD"
                     /locus_tag="VF991_11290"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEX9557074.1"
                     /translation="MPSSNLERTAHLPVSNFYLQELESESIHALREAAAMFRKPVILY
                     SIGKDSSVLLHLALKAFYPAKPPFAVLHVDTTWKFRDMIAFRDRRMKELGLDLHVHVN
                     RDGIARGIGPISHGAAIHTDVMKTEALKQALELHGFDAAIGGARRDEETSRAKERVFS
                     LRSANHRWDPRGQRPELWRLYNGRLNPGESIRVFPLSNWTELDIWTYIERENIPVVPL
                     YFAARRPVVERNGTLIVVDDDRLALCPNEVPQQRWVRFRTLGCYPLTGAIESRADTLP
                     AIIAELAASRLSERQGRVIDHGAGGSMERKKHEGYF"
     gene            2722..4590
                     /gene="cysC"
                     /locus_tag="VF991_11295"
     CDS             2722..4590
                     /gene="cysC"
                     /locus_tag="VF991_11295"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HEX9557075.1"
                     /translation="MAFALAPHADGEDLLRFITCGSVDDGKSTLIGRLLFDAKVVPDD
                     HLTAAMRDGRHYRAFGDMPDLAQLIDGLQAEREQGITIDVGYRFFSTPRRRFIVADTP
                     GHEQYTRNMATGASTADLAVILVDATKGVLRQTYRHSAIVALMGIRQVVLAVNKMDLV
                     DYREGAFAQVVAAYATMAERLGLAAVTAIPVSALLGDNVMRPSTSMPWYRGPTLLQHL
                     ETVSAGPREARPFRLAVQWVSRDGSGFRGYAGSVLGGAVQPGDEVVVLPSGKCCHVER
                     IVTYDGDLSRAIAGQAVTLTLAEPIDVARGDLIADAARPPHLADQFASHLLWMGEAPM
                     LPGRPYLMRLGTATLTATVSALKHQLDIGTGLRKAARQLAINEIGFANFVLDRAMPFD
                     AYSENRETGSFVLIDRLSNATVGAGMIRFPLRRAANLGWHKFTVDKDARSVIKGHRPA
                     VLWFTGLSGSGKSTIADGVEKRLLALGRHTYALDGDNVRHGLNRDLGFTDADRVENIR
                     RVIETAHLIADAGLIVLVSFISPFGAERRLARERLASDSFLEIFVDTPLAECERRDPK
                     GLYRKARRGGLKNFTGIDSAYEPPQTPDIHIRTVEMTIEQEVDLVIDALRERNIFD"
     gene            4643..5521
                     /locus_tag="VF991_11300"
     CDS             4643..5521
                     /locus_tag="VF991_11300"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HEX9557076.1"
                     /translation="MSARQFSLVPHRSVIAVGGPDRIEFLQGLISNDATKVVPGRAIW
                     AALLTPQGRFLNDMFVADGGNDTLLLETERERAPALAKKLAMYKLRSKATVEDRGKQL
                     EVAVAYGPDAAETLPIDGVIGFVDPRLAELGLRIIAPTGTAASALQSRGFSAAPIEAY
                     DALRLKLGVPDGSRDLVVEKALLLENGFDELNGIDWQKGCYMGQELTARTKYRALIRK
                     RLFPVRIEGALPEPGTAVLKDGQEVGELRSGSGERALAMLRLDAVKPGQKLTAGEAAI
                     LPEVPRWMRLPETTDP"
BASE COUNT          960 a         1890 c         1708 g          963 t
ORIGIN      
        1 cgctccggtg accagaatgt cgccggccgc cggcttgagg ccgtgcttct cgagcgccat
       61 tacacagagc atggaagtat aacccgccgt gccgatcgcc atggcgcgct tggacgagat
      121 cgcggccggc agcttgacca gccagtcgcc cttcacccgc gccttggtgg catagccgcc
      181 ccagtggagc tcgcccaccc gccagccgtt tagcaccacc ttgtcgcccg gcttgaagcc
      241 cgggttgtcc gatctttcaa cagtccctgc gaaatcaatg ccgccgacat gcggccaggt
      301 cttcaccagt ccgccgccgg tcgtcagcac cagtccgtcc ttgtagttga gcgtcgaata
      361 ctcgaccgcg accgtgacgt cgccggccgg caacttgtcg tcgggcaagg tctcgatgac
      421 gccgctcacc ttgcggtcgg caccctggct cagcacgagc gcgcggaacg acatgggaac
      481 tcctgcgatg atttcgccgg ggttctacca agactgcgcg gctgctgcga ccgcaacgtg
      541 ggttttctca cagcaagatg cggaccaaaa atccataaac tcgcaccagg caggtcatgc
      601 acggttgcat agctgcatcc caatacgcct ttgtgagata tcaacaaaga atatctgcaa
      661 tagtgtcgta atcgcacggc actgatgggg aagcagaggc cgcccgaagc gtatgcgtag
      721 gatgccgaac acaaacgatc tcccgattct ctcgacgatc ccccgttcgg gaacctggtt
      781 cctccgctat acggtttctt tcctttgcca tctcgagcgc ggcggtcgga tcgacgatcg
      841 actcaccggc aaaattttcg gcgatccgtc gggtccgcga ttcgattttc agcgtttcaa
      901 gggtgggccg cttttttggg tgcgcggcgc cctgccggcg gagcatctat tcatcggcca
      961 tacggtgtgt ccggggttcg ccgacctcgg cgccaagatc gattggtggc ggcggaccgc
     1021 cttccacgtg ccgggctacg actatttgca cgaagggatg aactaccgat atacgccggt
     1081 cgagctcgcg ccctatcgct acacgccgat tcgcgtgccg gccttggagc gttcggccaa
     1141 gcagggccac ggccagcgga tcgtcttggt ttatcgcaat ccgctggacc aggcggcatc
     1201 ctattaccgc tattgccaga atcatcggga tccggcctac aacacctaca agggccggcc
     1261 gctcacaacg gtgccattcc acgagtacct gttcgagtgc gctctgttct cctacgccaa
     1321 gcagtttctc tcgttccaga tcctggccgc caggcatccc gacctcgtgg ggctcctgcc
     1381 ctatgaacgg ctgatgagca gaccggtcga ggtcatgacc gacgtgctgg accatctttc
     1441 aggagcgccg gccaaccggc cggccctggg cgacgcccta tggcttgccc gaagcgagca
     1501 tatgaaggcc atcgagcgcg agctcggccg ctcgctcgac ggcacccgaa acggccatcg
     1561 cagccatatc cggcaggcca acgcccgcag acgcgacgac tggttcgacg atgcgacacg
     1621 cagcgaagcc atgaccgtgc tgcgcgtccg cggagttgac ctcgacctgt tcgaatggcc
     1681 ggccaccacc aaagctgcat ccgctgcata ggaggcatga acagcgccgc cacgtccatc
     1741 gacatatcat taccgctatg acgccggcga tcgaactcgg ccgatgccgt catcgaacct
     1801 ggaaagaaca gcccacttgc cagtctcgaa tttctacctg caggaacttg aatccgagag
     1861 catccatgcg ctgcgcgagg cggccgcgat gttccgcaag ccggtcatcc tctattcgat
     1921 cggcaaggat tcctcagtcc tgctccatct cgccctaaag gccttctatc ccgccaagcc
     1981 gccctttgcg gtgctgcacg tcgacacgac ctggaagttc cgcgacatga tcgcgtttcg
     2041 cgatcggcgc atgaaggagc tcggcctcga cctgcacgtt catgtcaatc gcgatggcat
     2101 tgcccgcggc atcggcccga tatcccatgg cgccgccatc cataccgacg tcatgaagac
     2161 cgaggcgctg aagcaggcgc tcgagctgca cggtttcgac gccgcaatcg gcggcgcccg
     2221 tcgcgacgag gagacctcgc gcgccaagga gcgggtgttc tcgctgcgca gcgccaacca
     2281 tcgctgggac ccgcgcggcc agcgccccga actgtggcgc ctgtacaacg ggcgcctcaa
     2341 tcccggcgaa agcatccgcg tcttcccgct gtccaattgg accgagctgg atatctggac
     2401 ctacatcgag cgcgagaata ttcccgtggt cccgctgtac ttcgcggcgc ggcggccggt
     2461 ggtggaacgc aacggcacgc tgatcgtggt cgatgacgat cgcctggcgc tctgtcccaa
     2521 cgaagtcccg caacagcgct gggtgaggtt tcggaccttg gggtgctatc ccctgaccgg
     2581 cgccatcgag tcgcgggccg atacgctgcc cgcgatcatc gccgagctcg ccgcaagccg
     2641 cctgtcggag cgccagggcc gcgttatcga tcacggcgcc ggcggttcga tggagcgcaa
     2701 gaagcacgaa ggctatttct gatggcattc gctcttgcgc cccacgccga cggcgaggac
     2761 ctgctgcggt tcatcacctg cggcagcgtc gacgacggca agagcacgct gatcggccgc
     2821 ctcctgttcg atgccaaggt cgtgccggac gaccacctga cggccgcgat gcgcgacggc
     2881 agacactacc gcgccttcgg cgacatgccg gatctggcgc agctgatcga tggcctgcag
     2941 gcggagcgcg agcaaggcat caccatcgac gtcggctacc ggttcttctc gaccccgcgg
     3001 cggcgcttca tcgtcgccga cacgccgggg cacgagcaat acacccgcaa catggcgacc
     3061 ggcgcctcga ccgccgacct ggcggtgatc ctggtcgatg ccaccaaagg cgtcctgcgc
     3121 cagacatatc ggcacagcgc catcgtggcc ctgatgggca tccgacaggt cgtcctggcg
     3181 gtcaacaaga tggacctcgt cgactaccgg gaaggcgcct tcgcccaggt cgtcgcggct
     3241 tacgccacga tggctgaacg gctcggcctg gccgcggtca ccgccatacc ggtctcggcc
     3301 ctgctcggcg acaatgtcat gcggccgagc acatcaatgc catggtatcg cggcccgacc
     3361 ctgctgcagc acctggagac ggtgagcgcg gggccgcggg aggcgcggcc ttttcgcctc
     3421 gccgtgcaat gggtcagccg cgacggttca ggcttccgcg gctatgccgg cagcgtgctg
     3481 ggcggcgccg tccagccggg cgatgaggtc gtcgtcctgc cctcgggcaa gtgctgccat
     3541 gtcgagcgca tcgtcaccta tgacggcgat cttagccggg ccatcgccgg ccaagccgtg
     3601 acgctcaccc tggccgagcc gatcgatgtg gcgcgcggtg atctcattgc cgacgccgct
     3661 cggccgcccc acttggcgga ccagttcgcg tcgcatcttc tctggatggg cgaggcgccg
     3721 atgctgccgg gccggcctta cctgatgcgg ctcggcaccg ccacgctgac cgcgacggtg
     3781 agcgcgctca agcatcaact cgatatcggc accggcctgc gcaaggcggc caggcaactg
     3841 gcgatcaatg aaatcggttt cgccaacttc gtcctcgacc gggccatgcc cttcgacgcc
     3901 tacagcgaga accgggaaac aggcagcttc gtgctgatcg atcggctgag caacgcgacg
     3961 gtcggcgccg gcatgatccg cttcccgttg cgccgcgccg ccaacctcgg ctggcacaag
     4021 ttcaccgtcg acaaggacgc aaggtcggtg atcaagggac atcgtcccgc cgtcctgtgg
     4081 ttcaccgggc tctcgggttc gggcaagtcg acgatcgccg acggcgtcga gaagcgcttg
     4141 ctggcgctgg gccgccatac ctacgcgctg gacggcgaca acgtgcggca cggcttgaac
     4201 cgcgatctgg gattcaccga cgccgaccgg gtcgagaaca tcaggcgggt gatcgagacg
     4261 gcccatctga tcgccgatgc cggcctgatc gtgctggtct cgttcatctc gccgttcggc
     4321 gccgaacggc ggctggcgcg cgagcggctg gcgtcggact ccttcttgga gatcttcgtc
     4381 gacacgccgc ttgccgagtg cgaacggcgc gatccaaagg gcctctaccg caaggcgcgg
     4441 cgcggcgggc tgaagaactt caccggcatc gattcggcct atgagccgcc gcagactccc
     4501 gacattcata tccgtaccgt cgagatgacg atcgagcagg aggtcgacct cgtcatcgac
     4561 gccctgcgcg agcgcaatat cttcgactga ccgccaagcc aagcgcttgc caagcccgcg
     4621 tttgcatccc acatctgggc gcatgagtgc ccgccagttc agtctcgtcc cgcatcgcag
     4681 cgtcatcgcc gtcggcggtc ccgacaggat cgagttcttg caggggctga tctccaatga
     4741 cgccaccaag gttgttcccg gtcgcgccat ctgggcggcc ttgctgacgc cgcaaggccg
     4801 gttcctcaat gacatgttcg tcgccgacgg cggcaacgat accttgctgc tcgaaaccga
     4861 gcgcgagcgc gcacccgctc tcgccaagaa gcttgcaatg tacaagctgc gatccaaggc
     4921 gacggtcgag gatcgcggca agcagcttga agtcgccgtg gcgtacggcc ccgacgccgc
     4981 cgagacgctg ccgatcgacg gcgtcatcgg cttcgtcgat ccgcgccttg ccgagcttgg
     5041 cctgcgcatc atcgcgccga ccggcactgc cgcttccgcc ctgcagtcgc gcggcttctc
     5101 cgccgcgccg atcgaagcct acgacgctct tcgcctgaaa ctcggcgtgc ccgacggcag
     5161 ccgcgacctc gttgtcgaga aggcgctgtt gctggagaac ggcttcgacg agctgaacgg
     5221 catcgattgg cagaagggct gctacatggg ccaggagctg acggcccgca ccaagtaccg
     5281 cgccctgatc cgaaagcggc tgttcccggt ccgcatcgag ggcgccctgc ccgaacccgg
     5341 gacggcggtc ttgaaggatg gccaggaagt cggcgaactg cgttcgggct cgggcgagcg
     5401 cgctcttgcc atgctgcgcc tggatgcggt caagccgggc caaaagctca cggcgggtga
     5461 ggccgctatt ttgccggagg tcccgcgctg gatgcgactt cccgagacca ccgaccccta
     5521 g
//
LOCUS       DASWGA010000473         8343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1577846, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000473 DASWGA010000000
VERSION     DASWGA010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8343
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1577846"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VF991_11305"
     CDS             complement(<1..574)
                     /locus_tag="VF991_11305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557077.1"
                     /translation="MGEPLIDIRSLTVDFDDGHRVVRALRGVDLAVQAGEAVGLVGES
                     GSGKSVSMLALMGLIPWPGKVAADRLIFAGHDLSKMTPAQRRRIIGKDMAMVFQEPTT
                     SLNPCFTVGFQIMETLAVHEGGSRAQRRRRAIELLDHVGIPAPAGRLGSFPHQLSGGM
                     NQRVMIAMAIACNPKLLIADEPTTALDVTIQ"
     gene            complement(595..2235)
                     /locus_tag="VF991_11310"
     CDS             complement(595..2235)
                     /locus_tag="VF991_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557078.1"
                     /translation="MSGLDRRQLLAAGGLAAGGLLLPRFAIGQADARPTISIAVQQVA
                     TSANLEVVRERSNVGERVQTPIFENLIARNLQSKLEPVPGLAESWRRIDERTVELALR
                     KGVKFHNGDEMNADDVVFTFGPERMFGAGGNSPSSKTLFTTVMTRDSVEGKTLPPEVV
                     GIAKRVWPSLEKVEAVDRYTVRFVNRVPDVTLEGRIAGAASEIISRRGFMEAKSWIEW
                     SRKPVATGPYKVREFRPDESLVLDAHDEYWGGRPPIKTLRFVVVPEVASRINGLLAGE
                     YHFICDVPPDQVTTIEQNPKFEVQGGLVTNHRITVFDKHHKQLVDPRVRQAITHSIDR
                     QAIVDSLWAGRTRVPPGLQWEFYDKMFIEGWTVPAFDPAKARELLRAANYKGDPIPFR
                     VLNNYYTNQVGTAQILVEMWRSVGLNVQIEMRENWQQIFENNGQRAIRDWSNSAGFSD
                     PISSIVGQHGPQGQQQQSQEWTNVEMNTLSAAMETEFDLARRKAMFKRMLEICEREDP
                     AFTVLHQTATFTAKRKDIVWKAAPAFQMDFRSGNFRMA"
     gene            complement(2379..3773)
                     /locus_tag="VF991_11315"
     CDS             complement(2379..3773)
                     /locus_tag="VF991_11315"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9557079.1"
                     /translation="MTELPWLSVVEAAQAIAAKDLSPVELTKSLLERIAALDPRLNAF
                     IRLEAEPAMQAAKAAETEATAGRLRGPLHGVPVGIKDIIDVAGLPTTGHSKILQDNLA
                     TADAVCVQKLRGAGAIVLGKLSTHEFAIGGPSFDLPWPPARNPWNTDHHPGGSSSGSG
                     SGVAAGLFPMALGSDTGGSVRNPASCCGIVGLKPTYGLVSRRGVFPLSFTLDHIGPMT
                     RTVADNALMLEVIAGHDPLDPGSAATRNGDYAAGLERSVRDLRVGFIRHFHEIDVAAE
                     PEVTAALEHVARTLQMEGAEVRDVKLPTLGEFGAVNRVILQSEAWAIHGPWLRERPGD
                     YGQLARRRLMAGAFFAAGDYVQAQRRRLEMIAEVEEALREHDVLLCASSMDPPCRIDR
                     PADIERTYPRQARTPFNVTGHPALAMMAGLSVDGLPLSVQFVGRYFDEATLFQVARAW
                     EQAAGTDKKRPPIV"
     gene            complement(3785..3967)
                     /locus_tag="VF991_11320"
     CDS             complement(3785..3967)
                     /locus_tag="VF991_11320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557080.1"
                     /translation="MDKATIELLARRAGLAKALAEFPEDVAAAAKQAADVMAKIKQPT
                     DPAAEPWPPMRAGDGL"
     gene            complement(4058..4903)
                     /locus_tag="VF991_11325"
     CDS             complement(4058..4903)
                     /locus_tag="VF991_11325"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557081.1"
                     /translation="MSDERYTVILGDRRYAIHRKWARLPAGQSFGFLSDLMVDAEGRV
                     HVAQRGTDRPVLVFDRDGRLIGTWGEGALAEPHYINAALDGSILVADRDAHQVLRFSS
                     SGQLVQALGKRHWPSLGAPFNHPTAAAQAPDGEIYVADGYGNSSVHRFAADGTLIATW
                     GGPGEGPGTFTTPHAVWVDRFGKVLVGDRENNRVQVFDRSGAFLAEWGDFYHPMQIWV
                     DDRDLVFVTDQIPRISLLDADGRLMGRCRGAINGAHGISGDADGNLYLAELPPQEITK
                     LERLN"
     gene            complement(4910..5401)
                     /locus_tag="VF991_11330"
     CDS             complement(4910..5401)
                     /locus_tag="VF991_11330"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9557082.1"
                     /translation="MSDLALASRRVLLAAAALGAVGGANAQTSGAGDPFQLVAVMERY
                     AAALGSNNVDALVALYTADGVFMREDLPAVVGSDALRAAYRQVFATLKVDLRFTIQET
                     EVAGDMAWLRSLSKGRIKTLATGVEADESFNSLIVFRREGGTWKIRCYLYASNKPGTG
                     TPQ"
     gene            5483..6118
                     /locus_tag="VF991_11335"
     CDS             5483..6118
                     /locus_tag="VF991_11335"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9557083.1"
                     /translation="MTDDRLVLHGSFTSSSTYKPMLFLALAGLPFSFRTVNLKNGVQK
                     EPAHLAINRYGQVPVLRHRGLTLVMSNVILDYLARTTGRFEAATEQDRWRAREWLAWE
                     NDAIVNVARVRHFHRFRTVDPAVMDFFRPPAEAALDFIDKSLEGRQWLVGESCTIADI
                     GCWGRMVFMAEGGLSLEARPHARAWRDRLMAMPGFALPYDLIPKKDAELPA"
     gene            complement(6208..7050)
                     /locus_tag="VF991_11340"
     CDS             complement(6208..7050)
                     /locus_tag="VF991_11340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557084.1"
                     /translation="MNRFVARAARHVGFQIGAVLLLLFVGTAVVSIFWTPHAVDELQM
                     RAKLMPSSAAYPLGTDHLGRDVLSRIMVGAQTSITVGLIAVVIGMVGGVTLGAWAAAR
                     GGWVDEALSRTSDLIFAFPAVLIAILITSVLGASAQNAILAIAIFNIPVFARVTRGAA
                     LAMWSRDFVRAATAMGQGPAGITLRHVLPNIMSVLIVQATIQFAVAILAEAGLSYLGL
                     GAQPPVPSWGRMLRDAQTYIFQAPELAVWPGLAIALAVLGLNMLGDGLRDLLDPRLRL
                     LRVG"
     gene            complement(7047..7994)
                     /locus_tag="VF991_11345"
     CDS             complement(7047..7994)
                     /locus_tag="VF991_11345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557085.1"
                     /translation="MLDFLSRRLAAALVTLVLATVVVFAVVEVLPGDPALVMLGTDAR
                     PDTLAALRAKYGFDQPLAVRYLRWIGGLLTFDLGSSHAYGTSVAKLIGDRLQVTLPLG
                     ALALAWALLVAIPLGVFAAWQHGRPGDWGVMGFTQIGISVPNFWFGIVLVLLFAVTWQ
                     IFPAGGFPGWRQEPLKSLHALILPALSLSLGEIAILARVTRSAMLDTLREDYVRTARA
                     KGAPERTVLFGHALRNALIPVTTVAGLIAGFLVAGAVIIESVFRLPGVGQLVYDSINN
                     RDLIVIKNVVLLFTVLVLAANLLVDLAYAFLDPRPRVRA"
     gene            complement(8083..>8343)
                     /locus_tag="VF991_11350"
     CDS             complement(8083..>8343)
                     /locus_tag="VF991_11350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557086.1"
                     /translation="DRYARDGYYWGYDSPEFKAKWREVVAATDFAKRDELLKQAQRIV
                     ARDAVNGFLFQLAKIGVWKKDLVGLWENSPTPQTDLTGVYWK"
BASE COUNT         1428 a         2736 c         2845 g         1334 t
ORIGIN      
        1 cctggatggt gacgtcgagc gccgtggtcg gctcgtcggc gatcagcagc ttgggattgc
       61 aggcgatcgc catggcgatc atcacccgct ggttcatgcc gcccgaaagc tggtgcggaa
      121 agctgccgag ccggccggcc ggagcgggga tgccgacatg gtcgagcagc tcgatggcgc
      181 gccgccgccg ctgcgcccgg ctgccgccct catgcaccgc cagcgtctcc atgatctgga
      241 atccgacggt gaagcaggga ttgaggctgg tggtcggctc ctggaagacc atcgccatgt
      301 ccttgccgat gatgcggcgg cgctgcgccg gagtcatctt ggacaggtcg tggccggcga
      361 agatcaggcg atcggcggcg accttgccgg gccagggaat cagccccatc agcgccagca
      421 tggagacgct cttgcccgaa cccgattcgc ccaccagccc gaccgcctcg ccggcctgga
      481 ccgcgaggtc gacaccccgc aaggcgcgga cgacgcgatg gccgtcgtcg aaatcgacgg
      541 tcaggctgcg aatgtcgatc agcggttcgc ccatgaagcg cagcgatcgc cgctctaggc
      601 catgcggaag ttgccggagc ggaaatccat ctggaaggcg ggcgccgctt tccagacgat
      661 gtccttgcgc ttggcggtga aggtcgccgt ctggtggagg acggtgaaag ccgggtcctc
      721 gcgctcgcag atctcgagca tgcgcttgaa catcgccttg cgcctggcga gatcgaactc
      781 cgtctccatg gcggccgaca acgtgttcat ctcgacgtta gtccattcct gggactgctg
      841 ctgctggccc tgcggcccgt gctggccgac gatcgagctg atcggatcgg agaagcccgc
      901 gctgttggac cagtcgcgga tggcgcgctg gccgttgttc tcgaagatct gctgccaatt
      961 ctcgcgcatc tcgatctgga cgttgagccc gacgctgcgc cacatctcga ccaggatctg
     1021 cgccgtgccg acctgattgg tgtaatagtt gttgagcacg cggaagggga tcggatcgcc
     1081 cttgtagttg gcggcgcgca acagctcgcg cgccttggcc ggatcgaagg ccggcaccgt
     1141 ccagccctcg atgaacatct tgtcgtagaa ttcccattgc aggccgggcg gcacgcgggt
     1201 gcggccggcc cacaggctgt cgacaatggc ctggcggtcg atcgagtggg tgatcgcctg
     1261 gcggacacgc ggatcgacga gctgcttgtg atgcttgtcg aacacggtga tgcggtggtt
     1321 ggtgaccaac ccgccctgga cctcgaactt gggattttgt tctatggtcg tcacctggtc
     1381 gggcggcacg tcgcagatga agtggtattc gccggccagc aggccgttga tccggctcgc
     1441 gacctcgggg accacgacaa agcgcagcgt cttgatcggc ggccggccgc cccaatactc
     1501 gtcatgcgca tcgagcacca ggctctcgtc gggcctgaac tcgcgcacct tgtacgggcc
     1561 ggtcgccacc ggcttgcgcg accattcaat ccagctcttg gcttccatga aaccgcgacg
     1621 gctgatgatc tcgctggccg cgccggcaat gcggccttcc agcgtcacgt cgggcacgcg
     1681 gttgacgaaa cgcacggtgt agcggtcgac cgcctcgacc ttctcgagcg acggccaaac
     1741 gcgcttggcg atgccgacga cttccggcgg cagcgtcttg ccctcgacgc tgtcgcgcgt
     1801 catcacggtc gtgaacaggg tcttgctcga ggggctgttg ccgcccgcgc cgaacatgcg
     1861 ctccgggccg aaggtgaaca ccacgtcgtc ggcgttcatc tcgtcgccgt tatggaattt
     1921 cacgcccttg cgcagcgcca gctcgacggt gcgttcgtcg atccgtcgcc agctctcggc
     1981 cagcccgggg accggttcga gtttgctttg cagattgcgg gcgatcaggt tctcgaagat
     2041 cggcgtctgc acgcgctcgc cgacattgga gcgctcgcgc acgacctcga gattggcgct
     2101 ggtcgcgacc tgctggacgg cgatggaaat cgtcggcctg gcgtcggcct gcccgatggc
     2161 gaagcgggga agcaacaaac caccggccgc gaggccgccc gccgcgagaa gttgccgacg
     2221 atccaggcca gacatgactt ccccccgatg caaagctcgg tttttcacat tcttgtcggg
     2281 caaatctaac ggcctttcca aagacagtgt caagcaacgc gggcccgccg gctcgcggag
     2341 cgcattacac gcccgtcatg tctgttcgat gacagctctt acacgatcgg cggccgcttc
     2401 ttgtcggtgc ccgccgcctg ctcccaggcg cgggccacct ggaacagcgt ggcctcgtcg
     2461 aagtagcggc cgacgaactg cacagacagc ggcaggccat cgaccgacag tccggccatc
     2521 atggcgagcg ccggatggcc cgttacgttg aacggcgtgc gcgcctggcg aggataggtg
     2581 cgctcgatat cggccggccg gtcgatgcgg cacggcgggt ccatcgagct ggcgcacaac
     2641 aggacatcgt gctctcgaag cgcctcttcg acctcggcga tcatctcgag ccgacgacgc
     2701 tgcgcctgca catagtcgcc ggcggcgaag aaggcgccgg ccatgagacg gcggcgggca
     2761 agctggccgt agtcgcccgg ccgttcgcgt agccacgggc catggatcgc ccaggcctcg
     2821 ctttgcagga tcacgcggtt gaccgcgccg aactcgccga gcgtcggcag tttgacgtcg
     2881 cgcacttcgg caccttccat ctgcaaggtg cgcgcgacgt gctccaaggc ggccgtgacc
     2941 tcgggttcgg ccgccacgtc gatttcgtgg aagtggcgga tgaaaccgac gcgcaggtcg
     3001 cgcacggagc gctccaggcc ggctgcatag tcgccgttcc gggtggcggc gctgcccgga
     3061 tcgagcgggt cgtggccggc gatcacctcc agcatcagcg cgttgtcggc gacggtccgc
     3121 gtcatcggcc cgatatggtc gagggtgaag gagagcggga agacgccgcg ccgcgagacc
     3181 aagccatagg tcggcttgag gccaacgatg ccgcagcagc tcgcgggatt gcgcacgctg
     3241 ccgccggtat cggagcccag ggccatcggg aaaagtcctg cggcaacgcc cgatcccgag
     3301 cccgaggacg agccgccggg atgatggtcg gtgttccacg gattgcgcgc cggcggccac
     3361 ggcaggtcga agctcggccc gccgatggcg aattcatgcg tcgagagctt gcccagcacg
     3421 atggcgccgg cgccgcgcag cttctgcacg cagacggcgt cggcggtcgc aaggttgtct
     3481 tgcaggatct tggaatggcc cgtggtcggt agccccgcga catcgatgat gtccttgatg
     3541 ccgaccggca cgccatgcaa cggcccgcgc aagcggcctg ccgtcgcctc ggtctcggcg
     3601 gccttcgccg cctgcatcgc cggctccgct tcgaggcgga tgaaagcatt gagccgcgga
     3661 tcgagtgcgg cgatgcgctc gagcagggac ttcgtcagct cgaccggcga gagatccttg
     3721 gccgcgatcg cttgcgcggc ctcgacgacg ctgagccagg gcagctcagt caagggcccg
     3781 tccctcatag gccgtctccc gcgcgcatcg gcggccacgg ctcggcagcc ggatcggtcg
     3841 gctgcttgat cttagccatc acgtcggcgg cctgcttggc cgcggcggca acgtcttcgg
     3901 ggaattccgc cagcgccttg gcaaggccgg cgcggcgcgc cagtagttca atcgtcgctt
     3961 tgtccatcgc agtctcctcc gctgggagag gtcagcatga ctcgcggcag ccgtctatcc
     4021 gttgctatcg cgaagcggtt aacgagggcg ggtcgcctca attcaaccgt tcgagcttgg
     4081 tgatctcctg cggcggcagc tcggcgagat agaggttgcc gtcggcgtcg ccggaaattc
     4141 catgtgcgcc attgatggcg ccgcggcagc ggcccatcaa ccggccgtcc gcatcgagca
     4201 ggctgatgcg cgggatctgg tcggtgacga acaccaggtc gcggtcatcc acccagatct
     4261 gcatgggatg gtagaagtcg ccccattcgg cgaggaaggc accgctgcgg tcgaacacct
     4321 ggacgcggtt gttctcgcgg tcgccgacca aaaccttgcc gaagcgatcg acccagacgg
     4381 cgtgcggcgt cgtaaaggtt cccggccctt cgccggggcc gccccaggtg gcgattagcg
     4441 tgccgtcggc ggcaaagcgg tgaacgctgg aattgccgta gccgtcggcc acgtagatct
     4501 cgccgtccgg cgcctgtgcc gcggcggtcg gatggttgaa cggcgcgccc agcgagggcc
     4561 agtgccgctt gcccagcgcc tgcacgagtt gcccggacga actgaagcgc agaacctgat
     4621 gggcgtcgcg gtcggcgacc aggatcgagc catcgagcgc cgcattgatg tagtgcggct
     4681 cggccagcgc gccctcgccc caggtgccga tcaggcggcc atcgcgatcg aacaccagga
     4741 ccggccggtc ggtgccgcgt tgggcgacat gcacgcggcc ttcggcatcg accatcaggt
     4801 cggacaggaa gccgaagctc tgcccggccg gcaggcgcgc ccatttgcga tggatggcgt
     4861 agcgccggtc gcccagaatg acggtgtagc gttcgtcgga catcgaaacc tactgcggcg
     4921 ttcccgttcc cggcttgttg gatgcataga ggtagcaacg gatcttccac gttccgcctt
     4981 cgcgccggaa cacgatgaga ctgttgaagg attcgtcggc ctcgacgccc gtggcaagag
     5041 tcttgatgcg ccctttggag agcgagcgca gccaagccat gtcgcctgcg acctcggtct
     5101 cctggatcgt gaagcggaga tcgactttca gcgtcgcgaa cacctgccga taggcggccc
     5161 gcaaagcgtc gctgccgacc acggccggca ggtcctcgcg catgaagacg ccgtctgccg
     5221 tgtagagcgc caccagggcg tcgacattgt tcgagccgag cgcggcggca tagcgctcca
     5281 tgaccgccac gagctggaag ggatcgccgg cgcccgacgt ctgggcgttg gcgccgccga
     5341 ccgcacccaa ggccgcagcg gcaagcagaa cgcgacgcga cgcaagggcg agatcggaca
     5401 agggctctct ccttcgtatg acatgccaga taggcaggga gcgccgcaga cggcaagatg
     5461 gattgtgccc gggaggcctg gaatgaccga cgatcgcctt gtgttgcatg gcagtttcac
     5521 ctcgagctcg acctacaagc cgatgctgtt cctggcgctg gccggcctgc cgttctcctt
     5581 ccgcaccgtc aacctcaaga acggcgtgca gaaggagccc gcgcacctgg cgatcaatcg
     5641 ctatgggcag gtgccggtgc tgcgccatcg cgggctcacc ctggtgatgt ccaacgtcat
     5701 cctcgactac ctggcgcgca ccaccggccg gttcgaggcc gcgaccgagc aggatcgctg
     5761 gcgcgcccgc gaatggctgg cgtgggagaa cgacgccatc gtgaacgtgg cgcgcgtgcg
     5821 ccacttccat cgcttccgca cggtcgatcc cgcggtgatg gatttcttcc gcccaccggc
     5881 ggaagccgcc ctcgacttca tcgacaagag cctggagggc cggcagtggc tggtcggcga
     5941 gagctgcacg attgccgaca tcggctgctg gggccgcatg gtgttcatgg ccgagggcgg
     6001 cctgtcgctc gaggcgcggc cccatgcgcg ggcgtggcgc gaccggctga tggcgatgcc
     6061 gggctttgcg ttgccctacg acctcatccc caagaaggac gccgagttgc cggcatgagc
     6121 tccccccggt aatttctgcg caccattcgg ggggtaaacg attttcgaaa tctattgttt
     6181 tcaatgggtt agagaaatta acctttacta acccacgcgc agcagccgca gccgcgggtc
     6241 caaaagatcg cgcaggccat cgcccagcat gttgaggccg agcacggcca gcgcgatggc
     6301 cagtcccggc catacggcaa gctccggcgc ctggaagatg taggtctggg cgtcgcgcag
     6361 catgcggccc cacgacggca ccggtggctg agcccccaaa ccaagatagg acaggcccgc
     6421 ttcggccagg atggcgacgg cgaactggat ggtcgcctgg acgatcagca cgctcatgat
     6481 gttcggcagc acgtggcgca gggtgatgcc ggcaggtcct tgacccatcg cggtcgccgc
     6541 ccgcacgaag tcgcggctcc acatcgccag cgccgccccg cgggtcaccc gcgcgaacac
     6601 cgggatgttg aagatggcga tggccagaat ggcgttctgc gcgctggcgc ccagcaccga
     6661 ggtgatcagg atggcgatca gcacggcggg aaaggcgaag atcaggtcgg acgtgcgtga
     6721 cagggcctcg tcgacccagc cgccgcgggc tgccgcccag gcccccagcg ttacgccgcc
     6781 caccatgccg atgacgacgg cgatcaaccc gacggtgatg gaagtctgcg cgcccaccat
     6841 gatgcgcgac agcacatcgc ggccgagatg gtcggtgccc agcggatagg ccgccgagga
     6901 cggcatcagc ttggcgcgca tctgcagttc gtcgacggcg tgcggcgtcc agaagatcga
     6961 gacgaccgcg gtgccgacga acagcagcag cagaacggcg ccgatctgga agccgacatg
     7021 gcgggcggcg cgggcgacaa agcggttcat gcccgcacgc gcggccgcgg atcgaggaag
     7081 gcgtaggcca gatcgaccag aagattagcc gcgagcacca ggaccgtgaa caacaggacc
     7141 acgttcttga tcacgatcag gtcgcggttg ttgatcgaat cgtagacgag ctggccgacc
     7201 ccgggcaggc ggaagacgct ttcgatgatc acggcgccgg cgaccagaaa gccggcgatc
     7261 aggccggcca cggtcgtcac gggaatgagc gcgttgcgga gcgcgtggcc gaacagcacg
     7321 gtgcgctcgg gcgcgccctt ggcgcgggcg gtgcggacat agtcctcgcg caaggtgtcg
     7381 agcatggccg agcgggtgac gcgggccagg atcgcgatct cgcccagcga cagcgacagg
     7441 gccggcagga tcaacgcatg cagcgatttc aatggctcct ggcgccagcc cggaaagccg
     7501 ccggcgggaa agatctgcca ggtcaccgca aacagcagga ccagcacgat gccgaaccag
     7561 aaattcggca cggaaatgcc gatctgggtg aagcccatca cgccccagtc gccgggccgg
     7621 ccgtgctgcc aggcggcgaa gacgccgagc gggatcgcca ccagcagagc ccaggcgagc
     7681 gccagcgcgc ccagcggcaa ggtcacctgc agacgatcgc cgatcagctt ggcgaccgag
     7741 gtgccgtagg cgtggctgct gcccagatcg aaggtcagca agccgcctat ccagcggaga
     7801 tagcgcacgg ccagcggctg gtcgaagccg tacttggccc tgagtgcggc caaagtgtcg
     7861 ggccgcgcgt cggtgcccag catgaccagc gccggatcgc ccggcaggac ctcgaccacg
     7921 gcgaacacca cgaccgtggc cagcaccagc gtcaccagcg cggcggcgag ccggcgggag
     7981 aggaagtcaa gcatctggcc acgttgtcat cccgaggccg aaggccgagg gacctttaag
     8041 gccacaggaa aggtccctcg cgtcgctcgg gatgacaccg agtcatttcc aatagacgcc
     8101 cgtcagatcg gtctgcggcg tcggtgaatt ctcccacagg ccgaccaggt ccttcttcca
     8161 cacgccgatc ttggcgagct ggaagaggaa gccgttcacc gcatcgcggg cgacgatgcg
     8221 ctgggcctgt tttagaagct cgtcgcgctt ggcgaagtcg gtggcggcga cgacctcgcg
     8281 ccacttggcc ttgaactcgg gcgaatcgta gccccagtag tagccgtcgc gggcgtagcg
     8341 atc
//
LOCUS       DASWGA010000474         2758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_566505, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000474 DASWGA010000000
VERSION     DASWGA010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2758
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_566505"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..1163
                     /gene="mnmA"
                     /locus_tag="VF991_11355"
     CDS             27..1163
                     /gene="mnmA"
                     /locus_tag="VF991_11355"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEX9557087.1"
                     /translation="MHHLRDDLDLAGNPADHRIVVAMSGGVDSSVTAALLKEQGYDVV
                     GVTLQLYDHGVAVGKTGACCAGQDIADARHVAERLAVPHYVLDYESRFRAEVMDSFAE
                     SYLRGETPVPCIACNRTVKFRDLLRTARELGAEALATGHYVQRVMGEAGPELHRGADP
                     ARDQSYFLFGTTPEQLDFLRFPLGHLPKSETRALAERFALPVAEKPDSQDICFVPGGD
                     YASVVRKLRPEANQPGDIVDLAGKVIGRHDGIVRFTVGQRRGLALGGRDGTDNEPLYV
                     VRLEPETRRVVVGPRSALGRSEIALYDLNWIGPALDGPLAVQVRLRSSQALRPAEIER
                     SGEGAVVRFAAPELGVSPGQACVVYDAATGSRVLGGGFIRRFAC"
     gene            1157..1516
                     /locus_tag="VF991_11360"
     CDS             1157..1516
                     /locus_tag="VF991_11360"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9557088.1"
                     /translation="MLKFDHLNIPVSDLDRSRDWYLSALGLKVEFEVPDRRTVALQDG
                     EGFAIFLQEKLGVAPNGVALWFQVDDVDQAFAAWTARGVTFVHGPQKNFWGYGAELAD
                     PDGYLVRLWDERSMKEK"
     gene            1573..1649
                     /locus_tag="VF991_11365"
     tRNA            1573..1649
                     /locus_tag="VF991_11365"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1607..1609,aa:Met,seq:cat)
     gene            1715..2737
                     /locus_tag="VF991_11370"
     CDS             1715..2737
                     /locus_tag="VF991_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9557089.1"
                     /translation="MPTGHTHQTDVVIVGAGPVGLFAVFECGMVRLHCHVVDVLDDAG
                     GQCTALYPEKPIYDIPGFPRIEAAELVVRLKAQAAAFRPVYHLGEQVQALEALTGGFW
                     RVTTSRGTVLQAKAVIIAAGVGAFGPNRPPLAGIEAYEGKSVFYYVTHRENFRGKRVV
                     IAGGGDTAIDWALSLAEVAQRVSVIHRRDKFRAAPESEARLKALVKAGKIDLVVPYQL
                     HALEGAQGQLTSVTAATLDGATRRIEADALLPFFGLSMSLGPIADWELALQHNQIGID
                     AATTATNRPGIFAIGDVVTYPGKLKLILTGFAEAAIAARSAYALIHPETPLHFEYSTT
                     AGIPTV"
BASE COUNT          414 a          971 c          902 g          471 t
ORIGIN      
        1 ttcccaccac tggctgccgc aagctgatgc atcatcttcg agatgatctc gacctcgccg
       61 gtaacccggc cgatcaccgc atcgtcgtcg cgatgtcggg cggcgtcgat tcgtcggtga
      121 cggccgcgct cctgaaggag cagggctacg acgtggttgg cgtcaccctg cagctctacg
      181 accacggcgt ggccgtggga aagaccggcg cctgctgcgc cggccaggac atcgccgacg
      241 cccgccacgt cgccgagcgg cttgccgtcc cgcactacgt gctcgactac gaaagccgtt
      301 tccgcgccga ggtgatggac tcgtttgccg agtcctatct gcgcggcgag acgccggtgc
      361 cctgcatcgc ctgcaaccgc accgtgaagt tccgcgacct gctccggacg gcgcgcgagc
      421 tcggcgccga ggcgctggcg accggccact atgtgcaacg cgtgatgggt gaggccgggc
      481 ccgagctgca tcgcggcgcc gatccggccc gcgaccagag ctatttcctg ttcggcacga
      541 cccccgagca gctcgacttc ctgcgctttc cgctcggcca cttgcccaag agcgagacgc
      601 gcgcgctcgc cgagcgcttc gcgctgccgg tcgccgaaaa gcccgacagc caggacatct
      661 gcttcgtgcc gggcggcgac tacgcgtcgg tggtgcggaa gctccgcccc gaggcaaacc
      721 agccgggcga catcgtcgac ctggcgggca aggtcatcgg ccgccacgac ggcatcgtgc
      781 gcttcaccgt cggccagcgc cgcggcctgg cgctgggcgg tcgcgacggc accgacaacg
      841 agccgctcta cgtcgtgcgg ctggagcccg agacacgccg cgtcgtggtc ggcccccgct
      901 cggcgcttgg ccgcagcgag atcgcgctct acgacctcaa ctggatcggg cccgcgctcg
      961 atgggccgct ggccgtgcag gtgaggctgc gttcgagcca ggcgctgcgg ccggccgaaa
     1021 tcgagcgcag cggcgaggga gccgtggtgc gcttcgccgc gcctgagctt ggcgtctcac
     1081 ccggccaggc ctgtgtggtc tatgatgccg ccaccggcag ccgcgtgctg ggcggcggct
     1141 tcataaggcg cttcgcatgt tgaagttcga ccatctcaac atcccggtca gcgacctcga
     1201 tcgctcgcgc gactggtatc tgtcggcgct cggcctgaaa gtcgaattcg aggttcccga
     1261 tcggcgcacg gtggcgctgc aggacggcga gggcttcgcg atcttcctgc aggaaaagct
     1321 gggcgtcgct cccaacggtg tggcgctatg gttccaggtc gacgatgtcg accaggcttt
     1381 tgctgcctgg acggcgcgcg gcgtgacctt cgtccatgga ccgcagaaga acttctgggg
     1441 ctatggcgcc gaacttgccg atccagacgg ctatctcgtg cgcctgtggg acgagcgctc
     1501 gatgaaggaa aaatgaggcc ttttagcctt tcttgacagg ctgctgcgcc gcccttaata
     1561 gcgcccaccc atggctgggt agctcagctg gttagagcac ggcactcata atgccggggt
     1621 cggcggttca agtccgcccc cagctaccaa attgcccccg gtctgcatga ccgggggcct
     1681 ttattttggg gtttctcttc gccaccttac gatcatgccc accggacata cgcaccagac
     1741 cgacgtcgtc attgtaggcg cgggccccgt cggcctgttc gccgtgttcg aatgcggcat
     1801 ggtccgtctg cactgccatg tcgtcgacgt gctcgacgat gccggcgggc agtgcacggc
     1861 gctctatccc gaaaagccga tctacgacat tccgggcttt ccccgcatcg aggcagccga
     1921 gctggtggtc cgcctgaagg cgcaggccgc cgcctttcgc ccggtctacc acctcggcga
     1981 gcaggtccag gcgctcgagg cgctgaccgg cggcttctgg cgggtcacca cctccagggg
     2041 caccgtgctc caggccaagg cggtgatcat cgccgccggg gtcggcgcct tcggtcccaa
     2101 ccgcccgccg ctggccggca tcgaggccta cgaaggcaag agcgtcttct actacgtcac
     2161 ccatcgcgag aatttccgcg gcaagcgggt ggtgatcgcc ggcggcggcg ataccgccat
     2221 cgactgggcg ctgtccctgg ccgaggttgc ccagcgcgtc tcggtgatcc atcgccgcga
     2281 caagttccgc gccgcccccg agagcgaggc caggctgaag gcgctggtca aggccggcaa
     2341 gatcgacctc gtcgtgccct atcagctcca cgcgctggag ggcgcccagg gccagttgac
     2401 gtccgtcacc gcggccacgc ttgacggcgc gacccggcgc atcgaggccg atgcgctgtt
     2461 gccgttcttt ggcctctcga tgtcgctcgg ccccattgcc gactgggaac tcgcgttgca
     2521 gcacaaccag atcgggatcg acgccgcgac cacggcgacc aaccgacccg gcatcttcgc
     2581 catcggtgac gtcgtcacct atcccggcaa gctgaagctg atcctgaccg gcttcgccga
     2641 ggccgccatc gccgcgcgct cggcctatgc gctcattcac cccgagacgc cgctgcactt
     2701 cgaatattcg acgacggccg ggattccgac cgtgtagatg ctggggcgcg ccactcca
//
LOCUS       DASWGA010000475         2121 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1069556, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000475 DASWGA010000000
VERSION     DASWGA010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1069556"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            254..1498
                     /locus_tag="VF991_11375"
     CDS             254..1498
                     /locus_tag="VF991_11375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014330008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HEX9557090.1"
                     /translation="MQFTRFLRNGSVTAAEMSRHGGEQTARRAAGREVVAIQDTSELV
                     LGGRRARAAGYGPVGKGSALGGLLLHPVLAVEAGSEALLGLVSMQVWNRPGGGQRSTR
                     RERSTAAKESQRWIDGMRQAGAVLAQAASITVLCDREGDMYELFAQRPANVQLIVRAC
                     QNRRIEQSAPTDEGLLFAFIDSRPEQGRVKVQVPAAPGRQARTAELAVRFAPVVLRRP
                     LHGADPTLPETLAVTLVEVRETAPPADGSKPIHWRLLTTHTVADVAQAQRVVSLYRLR
                     WIIEEFFSTLKTAGFDIEAADISEPRAMINLVAAATIAAVTIKQLVQARDGITDQRLT
                     DAFEPDDQPILEAVSARLEGKTERQRNPHPKGSLAFAAWVIARLGGWTGYYGKPGPKV
                     MRIGLVEFYAIKYGTTLVGHDV"
     gene            complement(1555..1854)
                     /locus_tag="VF991_11380"
     CDS             complement(1555..1854)
                     /locus_tag="VF991_11380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1244 domain-containing protein"
                     /protein_id="HEX9557091.1"
                     /translation="MDDKTRTELEAAAFRRLVAHLQERTDVQNIDLMNLAGFCRNCLS
                     RWYREEAGSRGIEIADPKAREIVYGMPYDEWKAKHQKEASGDQKKAYDKGQHKHG"
BASE COUNT          323 a          690 c          752 g          356 t
ORIGIN      
        1 cccctccggc cctgcgggcc acctccccac gcaagacgtc tgtcgtattc acacatcttg
       61 gttgcgcggg cgagggaagc tcgattctct ggctgccatg atggcggacg gagaggtcga
      121 tgtcaggagt caggtacgga ctggggcggt ttggcgacga tcgcctccaa aaaggggggc
      181 ctgcctgcat gcggcgctgg tgacccgccc ggggtcgtgc atccggcggc tgggagggac
      241 gcgagcgcgg gagatgcagt tcacgcgctt tctgcgcaat ggctctgtga cggcggcgga
      301 gatgtcgcgg catggcgggg agcagacggc ccggcgcgct gcaggccgcg aggtggtggc
      361 gatccaggac accagcgagt tggtgctggg cggccgtcgg gcgcgtgcgg cgggctatgg
      421 cccggtcggc aagggcagcg ccctgggagg cctgctgttg catccggtgc tggcggtgga
      481 ggccggcagc gaggcgctgc tgggcctggt gtcgatgcag gtgtggaacc ggccaggtgg
      541 cgggcagcgc tcgacccggc gcgagcgctc gacggcggcc aaggagtcgc agcgttggat
      601 cgacggcatg cgtcaggccg gcgcggtgct ggcgcaggcg gccagcatca cggtgctgtg
      661 cgatcgcgaa ggcgacatgt acgagctgtt tgcccagcgt ccggccaacg tgcagctgat
      721 cgtgcgggcc tgccagaacc ggcgcatcga acagtcggcg ccgacggacg aaggcctgct
      781 gttcgccttc atcgacagcc ggcccgagca aggccgggtc aaggtgcagg tccccgccgc
      841 ccctgggcgt caggcccgca cggccgaact cgccgtacgc tttgcgccgg tcgtgctgcg
      901 ccggccgctg catggcgccg atccgacgtt gcccgagacg ttggccgtta ccctggtcga
      961 ggtgcgcgag accgcgccgc cggccgatgg cagcaagccc attcactggc ggctgctgac
     1021 cacccatacg gtcgccgacg tggcccaggc gcagcgcgtg gtcagcctct atcgtctgcg
     1081 ctggatcatc gaagagttct tcagcacgct caagacggcc ggcttcgaca tcgaggcggc
     1141 cgacatcagc gagccgcggg cgatgatcaa tctggtcgcc gccgcgacca tcgccgccgt
     1201 caccatcaag caactcgtgc aggcgcgcga tggcatcaca gaccagcgcc tgaccgatgc
     1261 cttcgagcca gacgatcagc ctatcctcga agctgtctcg gccaggctcg agggcaagac
     1321 cgagcgacaa cgcaatccac atcccaaggg ctctctcgcc ttcgccgcct gggtcatcgc
     1381 ccgcctcggc ggctggaccg gctactacgg aaagccgggc cccaaggtca tgcgcatcgg
     1441 cctcgtcgag ttctacgcca tcaagtacgg cactaccctg gtcggtcacg atgtgtgaat
     1501 ccgacagcca cttcgtgggc ggagagggcc atttgacgag cgtcgatcgt cagctcaccc
     1561 gtgcttgtgc tggcccttgt cgtaggcctt cttctggtcg cccgaagcct ccttctggtg
     1621 cttggccttc cactcgtcgt acggcatgcc gtagacgatc tcgcgggcct tcgggtcggc
     1681 gatctcaatg ccgcgcgagc cggcttcctc gcggtaccag cgcgacaggc aattgcggca
     1741 gaaaccggcc aggttcatca ggtcgatgtt ctgcacatcc gtgcgttcct gcagatgcgc
     1801 gaccagccgg cgaaaggcgg cggcttcgag ttcggtgcgg gtcttgtcgt ccatggcggt
     1861 ctcctgggca gcgcgcttag aggcgtgtcc ggggatatag gctgagaccg cagtataaac
     1921 cagccggcag cggcgatccg cgggcatgtg cccgtccctc cttgagaaat tgcggcagca
     1981 gatggctgtg cggcccctcg ggtgaccggc cgccgggcgg cggaatcggc tggtgaacct
     2041 ctccacccga taggctgggg ttgaccccgg cctatcggct gcttcacgga tcagggaacg
     2101 cgccttgggt gcgctggaga t
//
LOCUS       DASWGA010000476         6973 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1578081, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000476 DASWGA010000000
VERSION     DASWGA010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6973
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1578081"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VF991_11385"
     CDS             complement(<1..874)
                     /locus_tag="VF991_11385"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9557092.1"
                     /translation="MNGPTNTIDPADEAQLLATIDRWVEREVAPKVKEFDHADRWPAE
                     LVEQMKELGLFGATVSPEYGGLGLPARTYAEIVMRVSSVWMALTGIFNSHLMMALLVE
                     KHGSSSLKEKYLPKFATGEIRGGLALTEPNAGTDLQAIRMRARRDGGDYILNGTKTWI
                     SNGIQGSCFAVLAKTDPQAEPRHRGMTMFLCEKGPGFTAGRKLEKLGYKGIDSAELVF
                     QDYRVPAANRIGEEGRGFQQAVGGLELGRINVAARGVGIAQAALAEAVKYSQQRETFG
                     KPICEHQAIQLKLGE"
     gene            1110..1652
                     /locus_tag="VF991_11390"
     CDS             1110..1652
                     /locus_tag="VF991_11390"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008263 - pyrimidine-specific mismatch
                     base pair DNA N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mismatch-specific DNA-glycosylase"
                     /protein_id="HEX9557093.1"
                     /translation="MPRTSSRNKHLVPDLLAPGLDLVFCGTAPSPASYRARAYYANPG
                     NAFWPTLNAVGLTPERFSPDRYPELLALGIGLTDLNKVEYGSDHELSAQAMNARALRA
                     KLRRFRPAAIAFTSKHAASWALGVKSPAYGRQAEPLEGAVAFVLASPSGRARSFWTLG
                     PWREAAAFVAERRQLRERAA"
     gene            1649..3067
                     /locus_tag="VF991_11395"
     CDS             1649..3067
                     /locus_tag="VF991_11395"
                     /inference="COORDINATES: protein motif:HMM:NF018561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HEX9557094.1"
                     /translation="MTVRRRSVLAAAAVPLAAPAIARAQESTPSLRDLARRATIYLFP
                     VYEMYRTRWRATVDEANPQRQRLNRFRHLPELADHRARLVTTPNHDTLYSSAWLDLSL
                     EPLFLTVPTVGDLYYSYAFLDLFTNNFAYVSHRLYGGRPPPHVIVGPAWNGDAPSEVK
                     LIRAPTNSVWLIGRLLLDAPEELDRVRILQARVLLETPDMRNERRILESRELMRHRTI
                     APLEPVADWPAPIRDDPFDLFKVGARALGESPLAERDRALFETFAPLKLRPGRKFDVR
                     AFNETERHALQAGIEQGYAEIRAGRPGKAIEGWTYGERHLGNFGDDYLYRATTALAGL
                     GALEPAEAVYMTCNTDVSGRPLSGANRYQLTFAADGLPSAHAFWSLAMYEVTPEGRAF
                     FVDNPIGRYTIGDRTGGLQKAADGSLTLYLQRERPEGERLANWLPAPAGPMRLVLRAY
                     EPDDSLIDGRYHLPGVRRNSPS"
     gene            3167..3811
                     /locus_tag="VF991_11400"
     CDS             3167..3811
                     /locus_tag="VF991_11400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HEX9557095.1"
                     /translation="MALQARAQQVAAAAGTAKFRVQPLTFNPEKIKGLSAKLLASHHD
                     NNYAGAVNRLNAVCEQIAKLDFANTPPFMVNGLKREEHIAYNSTILHELYFECLGEAP
                     TQPSGVFAQALERDFGSLDRWKAEFAATGKALGGGSGWVILTYAPRDKRLFNHWAADH
                     SMAPAGGVPLLVLDMYEHAYQMDYGADAAKYVDNFMQAIRWTTPERLYREAIRV"
     gene            complement(3861..4316)
                     /locus_tag="VF991_11405"
     CDS             complement(3861..4316)
                     /locus_tag="VF991_11405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003543974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase family protein"
                     /protein_id="HEX9557096.1"
                     /translation="MPVFTNPRRMPCFGTAPTLEDFEAIAAEALATIPEEFRRHVGNV
                     RIQVDDFPSDEVEKQMELDTPFDLLGLYQGVSMMERGAGHVANDIDRIFLYRRPILDY
                     WCESGEDLPHIVRHVLIHEIGHHFGLSDDDMEAIEAKAEEESRRVQPGA"
     gene            4442..5359
                     /locus_tag="VF991_11410"
     CDS             4442..5359
                     /locus_tag="VF991_11410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557097.1"
                     /translation="MLQFIVRRLIVAVLVAATVMTLAFVLTRLSGDLAISIAGPNATQ
                     ADVEAVRKAYGLDRPLVTQFFDWVGRAITGDLGDSYFFKARVSSLIAERMPITLTLGL
                     TGLVIALVVSLPLGILAAVRENTALDRAVQLVALLGQAMPSFWLGLLLMITLGLQLGW
                     LPISGTGSWQHYVMPGIVLAFSAIPALTRLTRAGMIQAMSSDYIRTARAKGLSRASIL
                     LKHALRNAAIPVVAIAAVQLGFMLGGSIVIEQVFALHGVGFLAWESIGKNDFPVVQAV
                     VLVLAVIYVALTMLADLMNAVLDPRLRGP"
     gene            5356..6219
                     /locus_tag="VF991_11415"
     CDS             5356..6219
                     /locus_tag="VF991_11415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557098.1"
                     /translation="MSLVTVTAGPRRGWRSVSTWVGATIVGIAAICAVFAPLLVPHDP
                     FAQDLGKRLLVPFWMAGSSPDHVLGTDQLGRDYLSRLIWGCRISMLIGVTVTIVSAVI
                     GITIGVLGGFLGGRVDDAVLFAITTRLSIPVVLVALAVVGLLGSSMTLLVLTLGLLLW
                     DRFAVVARATTMQVRNLDFVAAAWCAGCSRFRILSREVLPNIASHLVVVATLEIALAI
                     LLEAALSFLGLGVPPPLPSWGLMIAEAKDYMFFSPWVIVIPGVALFVLVLGINLLGDG
                     LRDLFGARTDP"
     gene            6216..>6973
                     /locus_tag="VF991_11420"
     CDS             6216..>6973
                     /locus_tag="VF991_11420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557099.1"
                     /translation="MSVLLEVEQLEVSFGGRTSAVRGASLAVERGETHCLVGESGCGK
                     SVTALAIMNLLARGARRSAKRLAFEGQDLQGLSDRSMAHLRGNAMAMIFQEPMTSLNP
                     AYTVGSQMTEVLRRHKHTSQRAATDRAIDLLARVGITAPGLRLGQFPHQLSGGLRQRV
                     MIAMALMCEPKLLIADEPTTALDVTVQAQILRLLAQLQRDLGLGMLLITHDLGIVARV
                     AHRVSVMYAGEVVESAATAQLFADPRHPYTQGLLR"
BASE COUNT         1033 a         2438 c         2259 g         1243 t
ORIGIN      
        1 tctcgccgag cttgagctgg atcgcctggt gctcgcagat cggcttgccg aaggtctcgc
       61 gctgctgcga gtacttgacc gcctcggcga gcgccgcctg cgcgatgccg accccgcgcg
      121 cggcgacgtt gatccgcccg agctcgaggc cgccgaccgc ctgctggaag ccgcggccct
      181 cctcgccgat ccggttcgcg gccggcacgc ggtagtcctg gaacaccagc tcggcggaat
      241 cgatgccctt gtaaccgagc ttctcgagct tgcgtcccgc ggtgaagccc gggcccttct
      301 cgcacaggaa catcgtcatg ccgcgatggc gcggctcggc ttgcgggtcg gtcttggcga
      361 gcacggcgaa gcacgagccc tggatgccgt tcgagatcca ggtctttgtt ccgttcagga
      421 tgtagtcgcc gccgtccctt cgcgcgcgca tccggatggc ctgcaggtcg gttccggcgt
      481 tcggttcggt cagcgccaat ccgccgcgga tctcgcccgt cgcgaattta ggcaaatatt
      541 tttcttttaa agatgaagaa ccatgttttt ctacgagaag cgccatcatc aggtgcgagt
      601 tgaagatgcc ggtgagcgcc atccataccg acgacacgcg catcacgatc tcggcgtagg
      661 tgcgcgccgg caggcccagc ccgccatact cggggctcac cgtggcgccg aacaggccga
      721 gctccttcat ctgctcgacc agctcggccg gccagcggtc ggcgtggtcg aactccttga
      781 ccttgggcgc gacctcgcgc tcgacccagc ggtcgatggt ggccagaagc tgcgcttcgt
      841 cggccgggtc gatagtgttt gttggcccgt tcatgaagtc ctcccgtcga ccatcatgcc
      901 cgatggaagg gggtggacaa ggccggcaag cctcaggtcg aaacgcctca gccgtcgacc
      961 cgcaggcccg cttccggtca tcgatgatcg aacgtgccgt ggccaagatt gtttccgctc
     1021 cgtgccataa aagcctctag gcgcgcggcg gccggtcatg catcatcgtc gaagggagca
     1081 tcgtcgatca cgccgggacg aggtcatccg tgccgcggac atcaagccgc aataaacatc
     1141 tcgttcccga tctgctggcg cccggcctcg acctggtgtt ctgcggcacc gcgcccagcc
     1201 cggcctccta ccgggcgcgc gcctactatg ccaatccagg caacgccttc tggccgaccc
     1261 tcaacgccgt cggcttgacg cccgagcggt tctcgcccga ccgttatccc gagctcttgg
     1321 cgctgggcat cggcctcacc gacctcaaca aggtcgagta cggctccgac catgagttgt
     1381 ccgcccaggc catgaatgcg cgcgcgctgc gcgccaagct gcgccgcttc cggccggccg
     1441 ccatcgcctt caccagcaag catgccgcgt cgtgggcgct cggcgtcaaa tcgccagcct
     1501 acggccggca ggccgagccg ttggaaggcg cggtggcctt cgtgctggcc tcgccctcag
     1561 gccgcgcccg ctcgttctgg acgcttgggc cgtggcgcga agccgccgcc ttcgtggccg
     1621 agcgccggca attacgcgag cgcgccgcat gaccgtgcga cgccgcagcg tgcttgccgc
     1681 cgccgccgta cccctggcgg cgccggcgat cgcgcgcgcc caggagagca cgccgagcct
     1741 gcgcgatctg gcgcggcggg cgacgatcta tctctttccg gtctatgaga tgtatcgcac
     1801 gcgctggcgg gcgacggtcg acgaggccaa tccgcaacgc cagcggctca atcgcttccg
     1861 ccacctgccg gagctggccg accatcgggc gcgcttggtg accacgccca atcacgacac
     1921 gctctattcg tcggcctggc tcgacctttc gctcgagccc ttgttcctca ccgtgccgac
     1981 ggtcggcgat ctctattaca gctacgcctt cctcgacctc ttcaccaaca acttcgccta
     2041 tgtcagccac cggctctatg gcggcaggcc gccgccgcac gtgatcgtcg gcccggcctg
     2101 gaacggcgat gcgccgtcgg aggtcaaact gatacgcgcg cccaccaact cggtgtggct
     2161 gatcggccgc cttctgctcg acgcgcccga ggagctcgac cgcgtgcgca tcctgcaggc
     2221 ccgcgtgctg ctcgaaacgc ccgacatgcg caacgagcgg cgcatcctgg agagccgcga
     2281 gctgatgcgc catcgcacga tcgccccgct cgagccggtg gccgactggc cggcacccat
     2341 ccgcgatgat cccttcgacc ttttcaaggt cggcgcacgg gcgctgggcg agagcccgct
     2401 ggccgagcgc gatcgagcgc tgttcgagac cttcgcgccg ctcaagctgc ggccgggacg
     2461 caagttcgat gtgcgagcct tcaacgagac cgagcggcat gccctgcagg ccggcatcga
     2521 gcagggttac gccgagatcc gggcgggccg gcccggcaag gcgatcgagg gctggaccta
     2581 cggtgagcgc catctcggca atttcggcga cgactatctt tatcgcgcga cgacggcgct
     2641 ggccgggctg ggcgcgctcg agccggccga ggccgtctac atgacctgca acaccgacgt
     2701 gagcggccgg ccgctgtcgg gcgccaaccg ctaccagctc accttcgcag ccgacggact
     2761 gccgtccgcc cacgccttct ggtcgcttgc catgtacgag gtgacgccgg aaggccgcgc
     2821 cttcttcgtc gacaatccga tcgggcgata caccatcggc gatcgcacag gcggcctgca
     2881 gaaagcggcc gacggctcgc tgacacttta cctgcagcgc gagcggccgg aaggtgagcg
     2941 cctggccaac tggctgcccg cgccggccgg gccgatgcgc ctggtgctga gggcctatga
     3001 gcccgacgac tcgctgatcg atgggcggta tcacttgccg ggcgtgcggc gcaactctcc
     3061 ttcctgagcg gcgttagggt ctgaataggt tcgtacccag gagaccgcca tgcccgacat
     3121 tccccgccgc tccctggccg cgggcgccgg cctgctggtc ggcgccatgg cgctgcaggc
     3181 ccgcgcccaa caggttgccg ctgccgccgg gaccgccaag ttccgggtcc agccgctcac
     3241 cttcaatccc gagaagatca agggactgtc ggccaagctg ctcgccagcc atcacgacaa
     3301 caactacgcc ggcgcggtga atcggctgaa cgcggtgtgc gagcagatcg ccaagctcga
     3361 cttcgccaac acgcctccct tcatggtgaa tggcctgaag cgcgaggagc acatcgccta
     3421 caattccacc atcctgcacg aactctattt cgagtgcctc ggcgaggcgc cgacccagcc
     3481 ctcgggcgtg ttcgcccagg cgctcgagcg cgacttcggc agcctcgatc gctggaaggc
     3541 ggagttcgcc gccaccggca aggcgctggg cggcggctcg ggctgggtga tcctgaccta
     3601 tgcaccgcgc gacaagcgcc tgttcaacca ctgggcggcc gaccacagca tggcgccggc
     3661 cggcggcgta ccgctgctcg tgctcgacat gtacgagcac gcctatcaga tggactacgg
     3721 cgccgacgcg gcgaagtacg tcgacaactt catgcaggcg atccgctgga cgacgccgga
     3781 gcggctttat cgcgaggcga tcagggtgtg acagcagggc ctgcaggccc ggctgtcacg
     3841 ttcaggacga caaaaagaag ctaagcgccc ggctggacgc ggcgggattc ttcctcggcc
     3901 ttggcttcga tcgcttccat gtcgtcgtcg ctcaagccga aatggtggcc gatttcgtgg
     3961 atcagcacgt ggcgcacgat gtgcggcagg tcctcgcccg attcacacca gtagtcgagg
     4021 atgggacggc gatagagaaa gatgcggtcg atgtcgttgg cgacatgacc tgcgccgcgt
     4081 tccatcatcg acacgccctg ataaagaccc aagaggtcga acggcgtgtc gagctccatc
     4141 tgcttctcga cctcatcgga cgggaagtcg tcgacttgta tgcgcacgtt gccgacatgc
     4201 cgacggaact cctcgggaat cgtggccagc gcctcggcgg cgatcgcctc gaaatcctcc
     4261 agagtaggcg ccgtgccgaa gcagggcatg cgccgcggat tggtgaagac cggcatgact
     4321 cccccatata ggacgacagc gcgcacgcca agaggcgaag atggacgaat ctttcatggc
     4381 cgttggcgtg cgattcgcat ggtcgcgttc ttgaccgatc cgctttaagc tggcgtcatc
     4441 catgctgcag ttcatcgtcc gacgcctgat cgtggccgtg ctggtggcgg ccaccgtcat
     4501 gacgctggcc ttcgtgctga cgcgcctgtc gggcgacctc gcgatttcca tcgccggtcc
     4561 caacgccacg caggccgacg tcgaggccgt gcgcaaagcc tatgggctcg accggccgct
     4621 cgtcacgcag ttcttcgact gggtcggccg cgccatcacc ggcgatctgg gcgacagcta
     4681 tttcttcaag gcgcgcgtgt cctcgctgat tgccgagcgc atgccgatca ccttgacctt
     4741 gggcctcacc ggcctggtga tcgcgctcgt ggtctcactg ccgctcggca tcctggcggc
     4801 ggtccgcgag aacaccgcgc tcgatcgcgc cgtccagctg gtcgcgctgc tcggccaggc
     4861 gatgccgtcg ttctggctgg gactgctctt gatgatcact ctgggcctgc agctcggctg
     4921 gttgccgatc tcgggcaccg gctcgtggca gcactatgtg atgccgggca tcgtgcttgc
     4981 cttctcggcc atcccggcgc tgaccaggct gacgcgcgcc ggcatgatcc aggccatgag
     5041 cagcgattat atccgcaccg cgcgggccaa gggcctctcg cgtgcctcga tcctgctgaa
     5101 gcacgccctg cgcaacgcgg ccattccggt ggtggcgatc gccgccgtcc agctcggctt
     5161 catgctgggc ggctcgatcg tgatcgagca ggtctttgcc ctgcacggcg tgggcttcct
     5221 ggcctgggag agcatcggca agaacgactt tcccgtggtc caggccgtcg tgctggtgct
     5281 ggcggtcatc tatgtcgcgc tcactatgct ggccgacctg atgaacgccg tgctcgatcc
     5341 caggctgcgc ggcccatgag cctcgtcacc gtcacggccg ggccgcggcg gggctggcgc
     5401 agcgtcagca cctgggtcgg cgcgacaatc gtgggcatcg ccgcgatctg cgccgtcttc
     5461 gcgccgctcc tcgtaccgca cgatccgttc gcccaggatc tcggcaagcg cctgctggtg
     5521 ccgttctgga tggcgggttc cagtcccgac cacgtcctcg gcaccgacca gttgggccgc
     5581 gactatctct cgcgcctgat ctggggttgc cgcatttcga tgctgatcgg cgtcaccgtg
     5641 acgatcgtgt cggccgtgat cggcatcacc atcggcgtgc tgggcggttt tttgggcggc
     5701 cgggtcgacg atgccgtgct gttcgccatc accacgcggc tttccattcc cgtggtgctg
     5761 gtggccctgg ccgtggtcgg cctgctcggc agctcgatga cattgctggt gctgacgctc
     5821 ggtctgctgc tgtgggaccg cttcgccgtg gtggcgcgcg cgaccaccat gcaggtgcgc
     5881 aatctcgact tcgtggccgc cgcctggtgc gccggctgct cgcgctttcg catcctctcg
     5941 cgcgaagtcc tgcccaacat cgccagccat ctcgtcgtgg tggcgacgct cgagatcgcg
     6001 cttgccatcc tgctcgaggc ggcgctgtcg ttcctgggac tcggcgtgcc gccgccgctg
     6061 ccgtcgtggg gcctgatgat cgccgaggcc aaggactaca tgttcttcag cccgtgggtg
     6121 atcgtcattc cgggcgtggc cctgttcgtg ctggtcctcg gcatcaatct tctgggcgac
     6181 ggcctgcgcg acctgtttgg agcgaggacc gatccgtgag cgtcctcctg gaggtcgagc
     6241 agctcgaggt gagttttggc ggccgcacct cggcggtgcg cggcgcctcg ctcgccgtcg
     6301 agcgtggcga gacccattgc ctggtgggcg aatcgggctg cggcaagtcg gtgaccgcgc
     6361 tcgccatcat gaacctgctg gcccgtggtg cccggcgctc ggccaagcga ctcgccttcg
     6421 aaggccagga tctgcagggc ctgtccgatc gaagcatggc gcatctgcgc ggcaatgcca
     6481 tggccatgat cttccaggag ccgatgacca gcctcaaccc cgcctacacg gtgggctcgc
     6541 agatgaccga ggtgctgcgc cgccacaagc atacgagcca gcgagccgcc accgaccgcg
     6601 ccatcgacct tctggcccgc gtcggcatca ccgcaccggg gctgcggctc ggccagttcc
     6661 cgcaccagct ctcgggcggc ctgcgtcagc gggtgatgat cgccatggcg ctgatgtgcg
     6721 agcccaagct gttgatcgcc gacgagccga ccacggcgct cgacgtcacg gtgcaggcgc
     6781 agatcctgcg cctgctcgcc cagctccagc gcgacctcgg gctcggcatg ctgctgatca
     6841 cccacgatct cggcatcgtg gccagggtcg cccatcgcgt ctccgtcatg tacgcgggcg
     6901 aagtggtcga gagcgccgcc accgcccagt tgttcgccga tcccaggcat ccttatacgc
     6961 agggcctgct gcg
//
LOCUS       DASWGA010000477         5540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1317397, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000477 DASWGA010000000
VERSION     DASWGA010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5540
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1317397"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..336)
                     /locus_tag="VF991_11425"
     CDS             complement(<1..336)
                     /locus_tag="VF991_11425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557100.1"
                     /translation="MTSAPAFPAIRVRPASLADYDALVALFDELDELHRQARPDFFRP
                     FDGLARTRAQIEQWLTAPASTVLVAESGEGVIGLAVVLTRPPASFAGAVPRKVIELDN
                     LVVRADQRGR"
     gene            complement(333..788)
                     /locus_tag="VF991_11430"
     CDS             complement(333..788)
                     /locus_tag="VF991_11430"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9557101.1"
                     /translation="MSIVEAEETGAVLPLSIRVRLAGPRDCEALSALLDDPAHARQQV
                     LTWLESPGTTLLVAQSELGVLGVAVLVMRIVPQAGGLTHKVVEVDNLVVRADQRGRRI
                     GRRLLAAVVEWSRQRRAVQVEAVVGEGDAKRFYESFGFAIANDRLVLAA"
     gene            complement(985..1641)
                     /locus_tag="VF991_11435"
     CDS             complement(985..1641)
                     /locus_tag="VF991_11435"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014889665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX9557102.1"
                     /translation="MSKPMLALASAGGVLVYLGLAILGWGGFDAFFSNPARTALVIAT
                     AAMVIAASFSSVNLSAGEREDRSNRWVIGALGLIGLLSAWLPAYTDRKEFWTLDGDGV
                     RWIGVALYAGGGTLRFWPVFVLGRRFSGLVAIQPGHTLVTSGIFSTIRNPSYLGLLVL
                     SLGWALAFRSGVGVLLAALNIPPLVARIRSEEALLRAQFGKEYEAYCARTWRLIPGLY
                     "
     gene            1723..3315
                     /locus_tag="VF991_11440"
     CDS             1723..3315
                     /locus_tag="VF991_11440"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9557103.1"
                     /translation="MHRLSNTLLTILLATAALVCAPVAAQQPTHPWPTKEWPISSPEE
                     QGMSSERLARLVDFGSFNDMDSVLVTRHGRIVLEATYAPFRAGLKHHVYSATKSVVST
                     LVGMALGDGLLDSTDRRVVDFFADRMIANLDDAKKAMTVQQLLDMTSGLGWQEGLSGA
                     IDSPIAMVRSPDWQQFVLDQPMAAAPGTRFYYNSGNSHLLSAILSKVTGRSTNDYARE
                     KLFGPLGIDDVLWQADPQGITVGGWGLHLQPRDMAKIGYLWLRGGLWEGRQILPAAWI
                     EGVRQADVDMRESWASDLRYGRQFWAMPPRDAFMAVGKHRQLIVVIPKLDIVAVVTGS
                     QRFATPSGNMISTPRYGFGTLVGYLAAAATSDGAVAANAAATAELAERVKAAAIERPA
                     PASASGSGSTMAKVVSGKTWRLAASGPLRVKSLTLKLDDPQPSYEYELDGGPPGAPVG
                     RFGGPIGFDGRFAVGGRMPYGPSAARGTWSADGASFVLEVQALGNDDVARVTHVFGDK
                     TIELSIEWANGFRAKVQGQTDD"
     gene            complement(3322..4263)
                     /locus_tag="VF991_11445"
     CDS             complement(3322..4263)
                     /locus_tag="VF991_11445"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX9557104.1"
                     /translation="MAAARIKGVLSPVVTPFKRDLSPDVGRFIAHCKWLLSQDCGLAV
                     FGTNSEANSMSAEERMGLLEAIVAAGVPTQRMMPGTGACSINEAAKVSAHATRLGVSG
                     VLMLPPFYYKGVPEEGLFRFFSEVVQRTGDDRLRVYLYHIPPVSAVPITHKLVERLLK
                     AYPKQIAGMKDSSDDWPHTKSMIDAFAKDGFDVFSGNEKPLIDNIKSGGAGCISATAN
                     INPGKIAETYKKYATPEGETLQGWINEVRGVMQGYVMIPALKYCIAHYGSDASWTPVR
                     PPLVETDEKAGKDMIAKLDKLGFTMPGLKQAMAVAAE"
     gene            4323..5462
                     /locus_tag="VF991_11450"
     CDS             4323..5462
                     /locus_tag="VF991_11450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX9557105.1"
                     /translation="MPASTSDILPDDGTAGTLVGRVWRRGKPSGPSVVAVRADGLFDI
                     TATTPTVADLCNAPDPAALVRGTTGDRLGTLKDHLGDLLAPIDLQAIKAAGVTFAVSL
                     LERLIEEHAKGDPGRAEQVRKELNQIIGADVTAIKPGSPEAEALKRTLLARGAWSPYL
                     EVGIGPYAEIFTKAPPMAAVGYGAEIGIRADSDWNNPEPEVTLIVNARAEIVGATLGN
                     DVNLRDIEGRSALLLGQAKDNNASCAIGPFIRLFDATFTLDDVRKAKVALEVSGPDQF
                     RLHGASDLSKISRDPTELVAHAMGSTHQYPDGMALMTGTLFAPTEPRRPGGTGFTHMV
                     GDQVSIRSPKLGTLTNRVNHCDKIPPWTFGVAALMRNLAARGLLG"
BASE COUNT          956 a         1907 c         1844 g          833 t
ORIGIN      
        1 ccggccgcgc tggtcggcgc ggaccacgag attgtcgagc tcgatcacct tgcgcggcac
       61 ggcgccggcg aaggaagcgg gcggccgcgt caatacgacg gcaagaccga tcacgccctc
      121 gccgctttcc gccaccagca ccgtcgacgc cggcgcggtc agccactgct cgatctgcgc
      181 acgcgtgcgc gccagcccgt caaagggccg gaaaaaatcc ggccgcgcct ggcgatgcaa
      241 ctcgtcgagc tcgtcgaaca gcgcgaccag agcgtcgtag tcggcgaggc tcgccgggcg
      301 cacccggatc gcgggaaagg ccggagccga ggtcacgccg ccagaaccaa ccggtcgttc
      361 gcgatggcaa agccgaagct ctcgtagaag cgcttggcgt cgccttcacc gaccacggcc
      421 tcgacctgca cggcgcggcg ctggcgcgac cattcgacga cggcggccag caggcgccgt
      481 ccgatgcgcc ggccgcgctg gtcggcgcgc accacgaggt tgtcgacctc gacgaccttg
      541 tgggtcagcc cgcccgcctg cggcacgatc cgcatcacca gcacggcgac gcccagcacc
      601 cccagctcgc tttgcgccac caggagcgtg gtgcccgggc tttccagcca ggtcagcacc
      661 tgctggcggg catgggccgg gtcgtccagc aaggcgctca gcgcctcgca gtcgcgcggc
      721 ccggccagcc gcacgcggat cgacagcggc agcaccgccc ccgtctcctc agcttcaacg
      781 atcgacatct cgtcctccgt ctgcggtccc gccgcggccc ggaggcccgt tccagaaaca
      841 cagaagccgc cgggatgcgg cggctttgtc aggtcatgac ctttcgcgcc gcctatgtag
      901 cagcgtaaag taccaaccct tctggagcag gttcgtggtc atggtaattc tataaccctg
      961 tgacggtggc gctgtcaacg cgacctagta gaggccgggg atcagtcgcc aggtgcgggc
     1021 gcagtaggct tcgtattctt tgccgaactg cgcgcgcagc agtgcctctt ccgaacgaat
     1081 gcgcgcaacg agcggcggaa tattgagcgc cgcgagcagc acaccgactc ctgaacggaa
     1141 agcaagcgcc caacccagcg acagaacgag cagaccgaga tagctgggat tgcggatggt
     1201 gctgaagatg ccactcgtga ccagcgtatg cccgggctgg atggcaacca ggccgctgaa
     1261 ccggcggccc agcacgaaca ccggccagaa gcgcagcgta ccgccaccgg cgtacaaggc
     1321 aacgccgatc caacggacgc catcgccatc gagggtccag aactccttgc ggtccgtgta
     1381 ggccggcagc caggcggaca gcaggccgat caagcccagt gcaccgatga cccagcggtt
     1441 ggagcgatcc tcgcgttcac cggcgcttag gttcacggag ctgaacgagg cagcgatgac
     1501 catcgctgca gtcgcgatca ccagcgcggt gcgcgctgga ttggagaaga acgcatcgaa
     1561 cccgccccag cccaatatgg cgaggccaag atagacaagg acgcctcctg ccgaggcaag
     1621 tgccaacatg ggcttggaca tgacgcccat gtgggcacag accgcacgat gtcaaatcgt
     1681 gctacgattc agttcgttcc gcgaccctga cggtggcagc gaatgcatcg gctctcgaac
     1741 acgcttctca cgatcctgct ggccacggcg gcgcttgtgt gcgcgcccgt cgcggcgcag
     1801 caaccgaccc acccgtggcc caccaaggag tggccgatct cctcgcccga ggagcagggc
     1861 atgagttccg agaggctggc ccgcctggtc gatttcggca gcttcaacga catggacagc
     1921 gtgctggtga cgcgccacgg ccggatcgtg ctggaggcga cctacgcgcc gttccgcgcc
     1981 gggctgaagc accacgtcta ctcggcgacc aagtccgtcg tcagcaccct ggtcggcatg
     2041 gcgttgggcg acggcctgct cgacagcacc gaccgccggg tcgtggactt cttcgccgac
     2101 cgcatgatcg ccaatctcga cgatgccaag aaggcgatga cggtccagca gctgctcgac
     2161 atgacatcgg ggctcggctg gcaggagggc ctgagcggcg ccatcgactc ccccatcgcc
     2221 atggtgcgca gtcccgactg gcagcaattc gtcctcgacc aaccgatggc ggcggcgccg
     2281 ggtacgcgct tctactacaa cagcggcaac agccacctgc tgtcggcgat cctgagcaag
     2341 gtcacgggca ggagcaccaa cgactatgcg cgggagaagc tgttcggacc gctcggcatc
     2401 gacgacgtgc tgtggcaggc cgacccgcag ggcatcacgg tcggcggctg gggcctccac
     2461 ctgcagccgc gcgacatggc gaagatcggc tatctctggc tgcgcggcgg cctgtgggag
     2521 ggcaggcaga tcctgccggc ggcgtggatc gagggcgtgc gccaggccga cgtggacatg
     2581 cgcgagagct gggcgagcga cctgcgctac ggccgccagt tctgggcgat gccgccccgc
     2641 gacgccttca tggcggtcgg caaacatcgc cagctcatcg tggtgatacc caagctcgac
     2701 atcgtggcgg tggtgaccgg ctcgcagcgc tttgccaccc cgagcggcaa catgatcagc
     2761 acgccgcgct acggcttcgg gacgctggtg ggctacctcg ccgccgccgc gacctccgac
     2821 ggagccgtcg cggccaatgc cgcggcgacg gccgagctcg ccgagcgggt gaaggcggcc
     2881 gccatcgagc ggccggcgcc ggccagcgcc agcggcagtg ggtcgacgat ggccaaggtc
     2941 gtctccggca agacctggcg gttggccgcc tccggtccgc tgcgcgtcaa gtctctcacc
     3001 ctgaagctcg acgatcccca accgtcctac gagtacgagc tcgacggcgg tccgcccggc
     3061 gccccggtgg gccggttcgg tggaccgatc ggcttcgacg gccgcttcgc cgtgggcggg
     3121 cgcatgccct acggaccgag cgccgcgcgc ggcacctggt cagccgacgg tgcgagcttc
     3181 gtgctcgagg tccaggcgct cggcaacgac gacgtggcac gggtgacgca cgtgttcggc
     3241 gacaagacca tcgagctcag catcgagtgg gcgaacgggt tcagggcgaa agtgcaggga
     3301 cagaccgacg actgaacgcg cctactccgc cgccaccgcc atcgcctgct tgagtccggg
     3361 catggtgaag ccgagcttgt cgagcttggc gatcatgtcc ttgccggcct tctcgtcggt
     3421 ctcgaccagc ggcggccgca ccggcgtcca cgacgcatcg ctgccgtagt gggcgatgca
     3481 gtacttcagc gccgggatca tgacatagcc ctgcatgacg ccgcgcacct cgttgatcca
     3541 gccctgcagc gtctcgccct cgggcgttgc gtacttcttg taggtctcgg cgatcttgcc
     3601 gggattgata ttggcggtgg cgctgatgca gcccgcgccg cccgacttga tgttatcgat
     3661 caagggcttc tcgttgcccg agaagacgtc gaagccgtcc ttggcgaagg cgtcgatcat
     3721 gctcttggtg tgcggccagt cgtccgacga atccttcatg ccggcgatct gcttggggta
     3781 cgccttgagc agccgctcga ccagcttgtg cgtgatcggc accgccgaca ccggcgggat
     3841 gtgatagaga tagacgcgca gccggtcgtc gcccgtccgc tgcacgacct ccgagaagaa
     3901 gcggaacagc ccctcctccg gcacgccctt gtagtagaag ggcggcagca tgagcacgcc
     3961 gctgacgccc agtcgggtgg cgtgcgcgct caccttggcg gcctcgttga tcgagcaggc
     4021 gccggtgccg ggcatcatgc gctgggtcgg cacaccggcg gcgacaatgg cctccagcag
     4081 ccccatgcgc tcctcggccg acatcgagtt ggcctcggag ttggtgccga acaccgccag
     4141 cccgcaatcc tggcttaaaa gccatttgca gtgcgcgatg aagcggccga cgtcgggcga
     4201 gaggtcgcgc ttgaagggtg tgacgaccgg cgaaagaacg cctttgatcc gcgctgcggc
     4261 catgatctta tttctcccgg gaatggcgcg cctgttctgc aacgaagcgc cggagacgtc
     4321 cagtgccagc ttcgaccagc gacattcttc cggacgacgg caccgccggc accctggtcg
     4381 ggcgggtttg gcggagggga aagccgtccg gccccagcgt cgtcgcggtg cgtgccgacg
     4441 ggctgttcga catcacggca accacgccca cggtggccga tctctgcaac gcacccgatc
     4501 cggcggccct ggtccgcggc accacgggcg accggctggg cacgctaaaa gatcacttag
     4561 gcgacctgct ggcgccgatc gacctgcagg cgatcaaggc ggcaggcgtc accttcgccg
     4621 tcagcctgct ggagcgcctg atcgaggaac acgccaaggg cgatcccggc cgcgccgagc
     4681 aggtgcgcaa ggaactgaac cagatcatcg gcgccgacgt caccgccatc aagccgggct
     4741 cgcccgaggc cgaagcgctg aagcgcacgc ttctggcgcg cggcgcctgg tcgccctatc
     4801 tcgaagtcgg catcggcccc tatgccgaga tcttcaccaa ggcgccgccg atggccgcgg
     4861 taggctatgg cgcggagatc ggcatccggg ccgattcgga ctggaacaat cccgaacccg
     4921 aggtgacctt gatcgtcaac gcccgcgccg agatcgtcgg cgccaccctg ggcaacgacg
     4981 tcaatctgcg cgacatcgag gggcgcagcg cgttgctgct gggccaggcc aaggacaaca
     5041 acgcctcctg cgccatcggc ccgttcatcc ggctgttcga tgcgacgttc accctcgacg
     5101 acgtgcgcaa ggcaaaggtc gcattggagg tgagcggccc cgaccagttc cggttgcatg
     5161 gggcaagcga tctctccaag atcagccgcg atcccaccga gctggtggcc cacgccatgg
     5221 gcagcacgca tcaatatccc gacggcatgg cgctgatgac cggcaccttg ttcgcgccga
     5281 ccgagccgcg ccggccgggc ggcaccggct tcacccatat ggtgggcgat caggtttcga
     5341 tccgctcgcc caagctcggc acgctcacca accgggtcaa tcactgcgac aagatcccgc
     5401 cgtggacctt cggcgtggcg gcgctgatgc gcaatctggc ggcgcgaggg ttgctgggat
     5461 gagcgacgac ctttgccgcc tgcccgcttc ggtgctgcgc gagaagatcg cggcaaagga
     5521 agtctcgccg gtcgagctga
//
LOCUS       DASWGA010000478         2493 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_817231, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000478 DASWGA010000000
VERSION     DASWGA010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_817231"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VF991_11455"
     CDS             <1..252
                     /locus_tag="VF991_11455"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995057.1"
                     /note="catalyzes the formation of L-tryptophan from
                     L-serine and 1-(indol-3-yl)glycerol 3-phosphate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEX9557106.1"
                     /translation="EHSWLKEQGRVEYVSATDNEALIAFQLLCKLEGIIPALEPAHAL
                     AHVTKLAPILPKDNLLVMNLCGRGDKDVFAVAERLGMKI"
     gene            256..1089
                     /gene="trpA"
                     /locus_tag="VF991_11460"
     CDS             256..1089
                     /gene="trpA"
                     /locus_tag="VF991_11460"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEX9557107.1"
                     /translation="MSRIAQRFAQLKADKRAGLVTYVTAGDPNAEIGYQILKGLPAAG
                     ADLIELGMPFTDPMADGPSIQLAGQRALKAGITVDATFDMVRRFRRETGDDDTPILLM
                     GYYNLVYQRGAERFCKQAAAAGVDGFILVDLPPEEADELKPHAAANGLDTVLLTAPTT
                     DDKRLPAVLKYSSGFVYFVSVLGITGTKSATEEAVRTHVERIKRHTKLPVGVGFGIKT
                     PDQAAAVARHADAAVVGSAIVDRVKAGLDEGGKPKPDLVPGVFAYIKALADGVRGVRK
                     A"
     gene            1210..1596
                     /locus_tag="VF991_11465"
     CDS             1210..1596
                     /locus_tag="VF991_11465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557108.1"
                     /translation="MQGGPIDRKDRLHENFVAALDLLDAEQREPDRWEEECLSYALGA
                     MACGMYLVAEVELAAFRRPLAERSPEVIATLAAKPARFTKAMLRHGLDYVQQHYGQPQ
                     VADLDVPPALAAGQLDFQSSLAAPSR"
     gene            complement(1593..2264)
                     /locus_tag="VF991_11470"
     CDS             complement(1593..2264)
                     /locus_tag="VF991_11470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9557109.1"
                     /translation="MLKVMIAPVTRFQQNCSIVWCDETMEGTAVDPGGDFDMLKEAIA
                     QQGIKVTKVLLTHGHVDHASAAGTMADHYQVKIEGPHRDDLFLIEGLPGSGRKYNFPA
                     YKPFVPDRWLEGGEQVTLGNLTFDVVHCPGHTPGHVVFVHKPSKVAFVGDVLFRGSIG
                     RTDFPRGNHEQLLESIRRRLWPLGDDITFVPGHGQTSTFGWERKTNPFVADLLFDDDE
                     EQAKA"
BASE COUNT          419 a          845 c          795 g          434 t
ORIGIN      
        1 gagcattcct ggctgaagga gcagggaagg gtggaatacg tgtcagccac cgacaacgag
       61 gcgctcatcg cgttccagct tctgtgcaag ctcgaaggca tcattccggc cctcgagccc
      121 gcgcacgcgc tggcccatgt caccaagctc gcgcccatcc tgcccaagga caatcttctg
      181 gtgatgaatc tctgcggccg cggcgacaag gacgtattcg ccgtcgccga gcggctgggc
      241 atgaagatct gatcgatgag ccgcatcgcc cagcgcttcg cccagctcaa ggccgacaag
      301 cgggccggcc tcgtgaccta tgtcacggcc ggcgatccca acgccgagat cggctaccag
      361 atcctcaaag gcctgcccgc cgccggcgcc gacctgatcg aactcggcat gccgttcacc
      421 gatccgatgg ccgacggccc ctcgatccag ctggccggcc agcgcgcgct caaggccggc
      481 atcacggtcg acgcgacgtt cgacatggtg cgccgctttc gccgggagac cggcgatgac
      541 gacacgccca tcctgctgat gggctactat aatctcgtct atcagcgcgg cgccgaacgc
      601 ttctgcaagc aggcggcggc ggccggagtc gatggcttca tcctggtcga cctgccgccc
      661 gaggaggccg acgagctgaa gccgcacgcc gccgccaacg gcctcgacac ggtgctgctg
      721 accgcgccca ccaccgacga caagcgcctg ccggcagtgc tgaagtactc gtcgggcttc
      781 gtctatttcg tctccgtgct cggtatcacc ggcaccaagt cggcgaccga ggaagcggtg
      841 cgcacccatg tcgagcgcat caagcgccac accaagctgc cggtgggggt gggcttcggc
      901 atcaagacgc cggaccaggc cgctgccgtg gcgcgccatg ccgatgccgc cgtcgtcggc
      961 tcggccatcg tcgatcgcgt gaaggccggg ctcgacgagg gcggcaagcc caagcccgat
     1021 ctcgtgccgg gcgtctttgc ctacatcaag gcacttgcag acggcgtgcg cggcgttcgc
     1081 aaggcatagc tcactgcatc acgcgtgatg tcgtgctgtg accattttgg ccatcacgcg
     1141 cgtcgtcatg gtcgggtcac gatcatgccc ccatatgcgt gcttggacgc aatggctgag
     1201 gagaagacga tgcagggcgg gccgattgat cgcaaagaca ggcttcacga gaacttcgtc
     1261 gccgcgctgg atcttctcga tgccgagcaa cgcgaacccg atcgctggga agaggaatgc
     1321 ctgtcctacg cgttgggcgc gatggcttgc ggcatgtatc tggtcgccga ggtcgaactc
     1381 gccgccttca ggcgaccgct cgccgagcgt tcacccgagg tgatcgcaac ccttgcggca
     1441 aagcccgcac gcttcaccaa ggcgatgctg cgccacggct tggactacgt gcagcaacat
     1501 tacgggcagc cccaggtcgc cgacctcgac gtgccgccgg cgctcgctgc gggccagctc
     1561 gacttccagt cctccctcgc cgcgccgtcg cgctaggctt tcgcttgctc ttcgtcgtcg
     1621 tcgaacaaca ggtcggcgac aaacggattg gtcttgcgtt cccagccgaa ggtcgaggtc
     1681 tggccgtgac cgggcacgaa ggtgatgtcg tcgcccagcg gccatagccg ccggcggatc
     1741 gactccagca gctgctcgtg attgccgcgc ggaaagtcgg tgcggccgat cgatccgcgg
     1801 aacagcacgt cgcccacgaa ggcgaccttc gacggcttgt gcacgaacac gacatggccc
     1861 ggcgtgtggc cggggcagtg cacgacatcg aaagtgagat tgcccagcgt tacctgctcg
     1921 ccaccctcca gccagcgatc gggcacgaag ggcttgtagg ccgggaagtt gtacttgcgg
     1981 ccggaaccgg gcaagccctc gatcaggaac aggtcgtcgc ggtgggggcc ctcgatcttg
     2041 acctggtagt ggtcggccat ggtgccggcg gccgaggcat ggtcgacatg gccatgggtc
     2101 agcagcacct tcgtcacctt gatgccctgc tgggcgattg cttccttcaa catgtcgaaa
     2161 tcgccgcccg ggtcgaccgc ggtgccctcc atggtctcgt cgcaccagac gattgagcag
     2221 ttctgctgaa accgggtgac gggagcgatc atgaccttga gcatggtatc gatctaatgc
     2281 ctcccgtggg cgcgtggaag ggcgtatgct ggggcccctc acgtatcgac ggcaatgaac
     2341 ctgcgtcttc tgctgtgcat cctgggcctg ctcggccttt cggcttttcc ctcccgcgcc
     2401 cagatcgcgc ctgtttcctc gccctccggc cccgtccagg ccggccccta tgtggtgatc
     2461 gacgccgcca ccggcgagac gctgctcgag cgt
//
LOCUS       DASWGA010000479         2012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1578525, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000479 DASWGA010000000
VERSION     DASWGA010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1578525"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VF991_11475"
     CDS             <1..464
                     /locus_tag="VF991_11475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEX9557110.1"
                     /translation="KGLASVDWPARLQKLSHGPLVEALPPGGELWLDGGHNEDCGIAL
                     ARQAAEWAKEPAALPLYLIYGMLTTKDAAGFLRPLARHAATARAVPIEGHAADTPQEA
                     CARAAEVGLDCAPANDIGAALEDLLASQPAPMRILICGSLYVAGEVLARNG"
     gene            complement(485..805)
                     /gene="trxA"
                     /locus_tag="VF991_11480"
     CDS             complement(485..805)
                     /gene="trxA"
                     /locus_tag="VF991_11480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEX9557111.1"
                     /translation="MTIKATDVSFEQEVLKSDTPVLVDFWAEWCGPCRMIGPSLEDIA
                     KEMDGKLKVVKVNIDENPTTPSRYNVRSIPTLLLFKNGQVAATKIGAEPKQKLVSWIN
                     TVVS"
     gene            complement(891..>2012)
                     /locus_tag="VF991_11485"
     CDS             complement(891..>2012)
                     /locus_tag="VF991_11485"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEX9557112.1"
                     /translation="IVYLPDTTRVPHNDERLIAGADGEARLWLPRVDDANDAARAWRA
                     QARERALEEQNRLLYVAMTRAEDRLYIGGWVGAKKPDRGCWYERIEAGLRASSEAEIF
                     PEAPPPRGRAVPRAFDFTRLLADEGWTGDGYELTNIGQIELPDQAELPLDLAARLEPW
                     IHQPAPPEPEPPTPLAPSQPLPDEALARPRAFSPLAPAGSRRWQRGRLMHDLLRHLPS
                     LAAGERPPAARRFLAQPAHGLTEEEIAALTDEALAVTEAAHHAALFAESSRAEVPLIG
                     TVRTPRGSFTVSGQVDRLAVSEREVLIVDYKTNRPPPLLAAEVPLAYRRQLALYRALL
                     GGIWPGRTVRAFLLWTAAPLLMEIDAETLDRSMPYAGAP"
BASE COUNT          298 a          672 c          718 g          324 t
ORIGIN      
        1 ccaaggggct cgcctcggtc gactggccgg cccggctgca gaaactgtcg catggcccgc
       61 tggtcgaggc cctgccgccc ggcggcgaac tgtggctcga cggcggccac aacgaggatt
      121 gcggcattgc gctggcgcgc caggccgccg aatgggccaa ggagccggca gccctgccgc
      181 tctatttgat ctacggcatg ctcacgacca aggacgcggc gggcttcctg cggccgctgg
      241 cgcggcatgc tgccaccgcg cgcgccgtgc cgatcgaggg ccacgccgcc gacacgccgc
      301 aggaagcctg cgcgcgggca gccgaggtcg gtttggattg cgcccccgca aacgacatcg
      361 gcgcggcgct ggaagacctt ttggccagcc agcccgcgcc gatgcgcatc ctgatctgtg
      421 gctcgctcta cgttgccggc gaggtgctgg cccgcaacgg ctgagcgcgc tagctgatga
      481 tcagctaact aacgacggtg ttgatccagc tcaccagctt ctgcttgggc tcggcgccaa
      541 tcttggtcgc ggcgacctgg ccgttcttga acagcagcag cgtcggaatc gagcggacgt
      601 tgtagcgcga cggcgtcgtc gggttctcgt cgatattgac cttcaccacc ttgagcttgc
      661 cgtccatctc cttggcgatg tcctccaatg agggaccgat catgcggcag gggccgcacc
      721 actccgccca gaagtcgacg aggacgggcg tgtcggactt caggacttcc tgctcgaagg
      781 agacatcggt cgctttgatc gtcatgtggg tttctcccaa aaacactgaa ggccggtcga
      841 tggaccggcg ccgcccttgg cctcaaagct aggaacggca gccgggcgag tcaaggtgcg
      901 ccagcataag gcattgatct gtcgagcgtt tccgcatcga tttccatcag caacggagcc
      961 gctgtccaca gcaggaaagc ccgtaccgtg cggccgggcc agatgccgcc gagcagcgcg
     1021 cgataaagcg cgagctggcg gcgataggcg agcggcacct ccgctgccaa gagcggcggc
     1081 ggccggttgg tcttgtaatc gacgatcagg acctcgcgct cgctgaccgc gagtcggtcg
     1141 acctggccgc tgacggtgaa gctgccgcgc ggcgtgcgca ccgtgccgat cagcggcacc
     1201 tcggcgcgcg agctttcggc aaacagcgcg gcatgatgag ccgcctcggt gacggcgagc
     1261 gcttcgtcgg tcaacgccgc gatctcttcc tccgtcaaac catgcgccgg ctgggcgagg
     1321 aagcgtcggg ccgctggtgg gcgctcgccc gctgccagcg acggcaggtg gcgcagcaga
     1381 tcgtgcatca gccggccgcg ttgccagcgt cgcgagcccg cgggcgcgag cgggctgaaa
     1441 gcgcgcgggc gggccagcgc ttcgtccggc aagggttgcg acggcgcgag cggcgtcggc
     1501 ggctcaggct cgggtggggc gggctgatgg atccacggtt ccagccgggc ggcgaggtcg
     1561 aggggcagct ctgcctggtc gggcagctcg atttggccga tattggtgag ttcatagccg
     1621 tcccccgtcc agccttcgtc ggccagcagc ctcgtgaagt cgaaggcgcg cggcactgcg
     1681 cggccacgcg gtggcggcgc ttcgggaaag atctcggcct cgctgctcgc cctgaggccg
     1741 gcttcgatgc gttcgtacca gcagccgcga tccggtttct tcgcgccgac ccagccgccg
     1801 atataaagcc ggtcctcggc ccgggtcatg gcgacgtaga gcaggcggtt ctgctcctcg
     1861 agcgcgcgct cgcgcgcctg ggcgcgccag gcgcgggcgg catcattggc gtcgtcgacg
     1921 cgcggcagcc atagccgggc ctcgccgtcg gcgccggcga tcagccgctc gtcgttgtgc
     1981 ggcacgcgcg tggtgtcggg caggtagacg at
//
LOCUS       DASWGA010000480         1546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2196943, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000480 DASWGA010000000
VERSION     DASWGA010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2196943"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1156
                     /locus_tag="VF991_11490"
     CDS             <1..1156
                     /locus_tag="VF991_11490"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557113.1"
                     /translation="IGSVLLAFAVGAVIVAVTGGDPFKAYQALACGGFGLFCFGGEPS
                     VLQLANTLVVVTPLIMAGIAVALPFRAGMFNIGAEGQLIMGAIAATTVGIHFGNWPAF
                     LLLPLVLICGALGGAVWGGIVGVLKAVTGAHEVVTTIMLNFVAQWFLRFLIIGGPLQL
                     PGGSSKSSPIGTSAQLATLVPHNSRLFLGLPGAVYRAHYGLFVALAAAAVFAFLLWRT
                     SLGYEIRAVGQSQRAARYGGISVRRTLVTSMLIAGAFAGLAGAVQIAGVDHNLTDQYF
                     SDTTGFDAIAVALLGLNSAVGIVLSAILFGALHAGGSTMQSDAGVSGNLVYVLQALIL
                     FSIAANFLRGLKLRLPSLGRVPDTPAADAMAAAVASEIETDLAADDKDTA"
     gene            1251..>1546
                     /locus_tag="VF991_11495"
     CDS             1251..>1546
                     /locus_tag="VF991_11495"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557114.1"
                     /translation="MLLLPALGGVISERSGVVNIAMEGMMLTGAFFAVAADLVVHNVF
                     LAVLAAMIAGGLMASIHAVVSIRYRADQIVSGVAINIFAAGITVFLLNRFYGLA"
BASE COUNT          212 a          520 c          496 g          318 t
ORIGIN      
        1 catcgggtcg gtgctgctag ccttcgccgt cggcgccgtc atcgtggcgg tcacgggcgg
       61 cgaccctttc aaggcatacc aggcgctcgc ctgcggcgga ttcggcctct tctgcttcgg
      121 cggcgagccg tcggtgctgc aactcgcgaa caccctggtc gtcgtaaccc cgctgatcat
      181 ggctggcatt gccgttgccc tgccgtttcg ggcgggcatg ttcaacatcg gcgccgaagg
      241 ccagctcatc atgggcgcga tcgcggcgac cacggtcggg attcacttcg ggaactggcc
      301 ggccttcctg ctgctgcccc tggtcctaat ctgcggcgcg ctgggcggcg ccgtctgggg
      361 tggcattgtc ggtgtcctga aggcggtgac cggcgcccac gaagtcgtga ccaccatcat
      421 gctcaatttc gtcgcccagt ggttcttgcg attcctgatc atcggcgggc cgctccagct
      481 gccgggtggc agctcgaagt catcgcccat tggaacatcg gcccagctcg cgaccctggt
      541 ccctcataac agccggttgt ttttgggcct gccgggtgcc gtgtaccggg cgcattacgg
      601 actcttcgtg gcgctggccg cagccgccgt cttcgctttc ttactgtggc gcacgtcgct
      661 cggctatgag attcgggccg tggggcaaag ccagcgggcg gcacgctacg gcggcatcag
      721 cgtgcgaagg actctcgtta ccagcatgct gatcgccggc gccttcgccg gcctcgccgg
      781 cgccgtgcag atcgcgggcg tcgatcataa cttgactgac caatacttct cggacacgac
      841 cggcttcgac gcgattgcgg tggcgctgct cggtctcaac agcgccgtcg gcattgttct
      901 ctcggcgatc ctgtttggcg ccttgcacgc cggcggcagc acgatgcaaa gcgacgccgg
      961 ggtgtccggc aacctcgtct acgtgttaca agcgctgatc ctgttctcga tcgccgcgaa
     1021 cttcctgcgc ggcctgaagc tccggcttcc gtcgctcgga cgcgtgccag acacgccggc
     1081 cgccgacgcc atggcggccg ccgtcgccag cgaaatcgag accgacctgg ccgccgacga
     1141 caaggacacg gcatgagagt cgggctggtc cagcaatgac cttcatcggt gacatttttc
     1201 ggctgatggg gacgcccgac ctgtggcatg cctcgctgca gtacgccgcg ttgctgctgc
     1261 tgccggccct cggcggcgtc atttcagaac gcagcggcgt cgtgaacatc gcgatggaag
     1321 gcatgatgct gacgggcgcc ttcttcgccg tcgccgccga cctcgtcgtg cataacgtgt
     1381 tccttgccgt gctggccgcc atgatcgccg gcggcctgat ggcctcgatc cacgcggtcg
     1441 tgtcgattcg ctaccgcgcc gaccagatcg tcagcggcgt ggccatcaat atctttgcgg
     1501 ccggcatcac ggtcttcttg ttgaatcgtt tctatgggct cgccga
//
LOCUS       DASWGA010000481         2575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_818341, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000481 DASWGA010000000
VERSION     DASWGA010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_818341"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VF991_11500"
     CDS             <1..291
                     /locus_tag="VF991_11500"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX9557115.1"
                     /translation="GIAGQMLLKAGADAPDFVSQLLRPSTLCGLALYGSAAFLYIIAL
                     RKIPVSVAFPSVSLSYAIVAVLGHFLFGEPFGIKQIGGIALIMGGVVLINQA"
     gene            301..1164
                     /locus_tag="VF991_11505"
     CDS             301..1164
                     /locus_tag="VF991_11505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HEX9557116.1"
                     /translation="MTYQQIKYESTDGILTITLHRPDKLNAFTGKMLSELLDAMDRAD
                     RDDDVRAVVFTGAGRGFCAGADLSGGADTFNAENRGPVDPGLTGHRDGGGLFTLRLFD
                     LLKPTIAACNGPAVGIGVTMQLAMDVRLASEAARYGFVFTRRAIVMEACSSWFLPRLV
                     GPQQALEWVMTGRVFAAEEALKGRLVRSVHKAEELLPAAYALAREIADNTAPVSVALN
                     RQMIWKMLGADHPMEAHKVDSKGIYERGKSADVKEGVTAFLEKRPAKFPMKVSTGMPS
                     YFPWWQERMFK"
     gene            1227..2264
                     /locus_tag="VF991_11510"
     CDS             1227..2264
                     /locus_tag="VF991_11510"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557117.1"
                     /translation="MTKLHLRRRAILAAAPVLIAAPYVARAQTGKPEKSKVILAVGGK
                     SALYYLSLTIAETRGFFKDAGLDVEINDFQGGAKSLEALMGGSADVVAGAYEHTIRMQ
                     QRGQPIKGFALIGRGMQLAIGLRNDVAAKVKGPADIKGMKFGVTAPGSQTQMLVTNWA
                     AKGGLKATDIVAVGVGAGASVVAAIENKSVDGISQADPALTILQEKNLIKIMVDTRTM
                     KGNQELFGGSMPAACLYAQPALLTKTPNTAQALATAIVRADEWLQTAPPSEVAKSVPT
                     GYLLGDQAIYEKAFANVRETISPDGIMPPDGPANCLKFLAEGDPKIEPAKIKLGETWT
                     NEFAQRAKKHS"
     gene            2301..>2575
                     /locus_tag="VF991_11515"
     CDS             2301..>2575
                     /locus_tag="VF991_11515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557118.1"
                     /translation="MADITCRFAARDERSEPYVAVANATLTVAKGEFVSVVGPTGCGK
                     STLLNVAAGLLEPSSGIVEIFGERLVAADGVNRRAGYMFQADALMPWR"
BASE COUNT          436 a          878 c          848 g          413 t
ORIGIN      
        1 ggcatcgcgg gccaaatgct gctcaaggcc ggcgccgacg ctcccgactt cgtgagccag
       61 ctcctgcggc cctcgacact ctgcggcctc gcgctctacg gctcggccgc cttcctctat
      121 atcatcgcgt tgcgcaagat cccggtgtcg gtcgcctttc ccagcgtgtc gctctcctat
      181 gcgatcgtgg cggtgctcgg ccacttcctg ttcggcgagc ccttcggcat caagcagatc
      241 ggcggcatcg cgctcataat gggcggcgtg gtgctcatca accaggcctg agagggaagc
      301 gtgacctacc agcagatcaa gtacgagagc acggacggca tcctcaccat cacgctccac
      361 cggccggaca agctcaatgc cttcaccggc aaaatgctgt cggagctttt ggacgcgatg
      421 gaccgcgccg accgcgacga tgacgtgcgc gcggtggtgt tcaccggcgc gggccgcggc
      481 ttctgtgccg gcgccgacct gtcgggcggg gccgacacct tcaatgccga gaatcgcggg
      541 ccggtcgatc ccggccttac cggccaccgc gacggcggcg ggctgttcac gctgcggctt
      601 ttcgatctcc tgaaaccgac catcgccgcc tgcaacggtc cggcggtggg catcggcgtc
      661 accatgcaac tcgccatgga cgtgcgtctc gcttccgagg cggcgcgcta cggtttcgtc
      721 ttcacgcgcc gcgccatcgt catggaggcc tgctcgagct ggttcctgcc gcgcctcgtc
      781 ggccctcagc aggcgctgga atgggtgatg accggccgcg tcttcgctgc cgaggaggca
      841 ttgaagggcc gcctggtgcg ctcggtgcac aaggccgaag agctgctgcc ggcggcctat
      901 gcgctcgccc gcgaaatcgc cgacaacacc gcgccggtgt cggtcgcgct caaccgccag
      961 atgatctgga agatgctggg ggccgaccat cccatggagg cgcacaaggt cgattccaag
     1021 ggcatctacg agcgcggcaa gtcggccgac gtgaaagagg gcgtgaccgc cttcctcgag
     1081 aagcgtccgg cgaagtttcc catgaaggtg agcaccggca tgccgtccta cttcccgtgg
     1141 tggcaggagc ggatgttcaa gtaaggttgc cggctggcaa ggcttacggc aatctcccgg
     1201 ccaacagccg tttttgggag gaaacaatga ccaagctgca cttgcggcgt cgcgcgattt
     1261 tggccgcggc gcctgttctg atcgccgcgc cttacgtcgc gcgggcgcaa accggcaagc
     1321 cggaaaagtc caaggtgatc ctcgctgtcg gcggcaagtc ggcgctctac tacctgtcgc
     1381 tcacgatcgc cgagaccagg ggcttcttca aggacgccgg cctcgacgtc gagatcaacg
     1441 acttccaggg cggcgccaag tcgctcgaag ccttgatggg cggcagcgcc gacgtggtgg
     1501 ccggcgccta cgagcacacc atccgcatgc agcagcgcgg ccagcccatc aagggcttcg
     1561 ccctgatcgg ccgtggcatg cagctcgcca tcgggctgcg caacgacgtc gccgccaagg
     1621 tcaagggtcc ggccgacatc aagggcatga agttcggcgt cacggcgccg ggttcgcaga
     1681 cccagatgct ggtcaccaac tgggcggcca agggcgggct gaaggccacc gatatcgtgg
     1741 ccgtcggtgt cggcgccggc gcctcggtgg tggcggcgat cgagaacaag tcggtcgacg
     1801 gcatctcgca ggccgatccc gcgctcacga tcctgcagga gaagaacctg atcaagatca
     1861 tggtcgacac ccgcaccatg aagggcaatc aggaactgtt cggaggctcc atgccggcgg
     1921 cctgcctcta cgcccagccc gctctcctga ccaagacgcc caatacggcg caggcgctgg
     1981 cgaccgccat cgtgcgcgcc gacgagtggc tgcagacggc gccgccgtcc gaagtcgcca
     2041 agtcggtgcc gaccggatac ctgctgggcg accaggcgat ctacgagaag gcgttcgcca
     2101 acgtgcgtga gaccatctcg cccgacggca tcatgccgcc cgacggcccg gcgaactgcc
     2161 taaaattcct ggccgagggc gatcccaaga tcgagccggc caagatcaag cttggcgaga
     2221 cgtggaccaa cgagttcgcg cagcgcgcca agaagcactc ttaagcccgc gtgccgatcg
     2281 acggaacgcc ggcgctcgcg ctggccgaca tcacctgccg cttcgccgcg cgtgacgagc
     2341 gaagcgagcc ctacgtcgcc gttgccaacg ccaccctgac ggtcgccaag ggcgagttcg
     2401 tgtcggtggt cggaccgacc ggctgcggca agtcgacctt gctgaacgtg gcggccggcc
     2461 tgctcgaacc ctcgtccggc atcgtcgaga tcttcggcga gcggctggtg gcggccgatg
     2521 gcgtcaaccg gcgcgccggc tacatgttcc aggccgacgc gctgatgccg tggcg
//
LOCUS       DASWGA010000482         8107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2464189, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000482 DASWGA010000000
VERSION     DASWGA010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8107
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2464189"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VF991_11520"
     CDS             complement(<1..208)
                     /locus_tag="VF991_11520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557119.1"
                     /translation="MAFAALVGTFATTPGQTVGVSSFIDPVASDLGLTRDNVLVLYSV
                     GTFLGILAAPSIGRLVDRFGPHRLI"
     gene            complement(295..1671)
                     /locus_tag="VF991_11525"
     CDS             complement(295..1671)
                     /locus_tag="VF991_11525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX9557120.1"
                     /translation="MNRGKTVAILGGGPVGLAAAAHVLERGMEPVVLEAGPAAGHAVR
                     QWSHVPMFSPWEYNIDKAAGRLLAAVGWNAPSGGGYPTGGELLAQYLEPLATRTPLKD
                     RVRTESLVTSVGRVGFDKAKTKGREAAPFEVRYQNGKGPESLRADTVIDATGTWFTPN
                     PAGADGRPAIGEHEVQDRLAYGMPDVLGRERERYAGKTVAVLGAGHSAIGTLIDLVRL
                     KDEVPTTQVIWLLRGDNPEKAFGGGANDKLAARGALGAAFAKLVASGKICVEAGFKVS
                     HLSRDGARLRISTGATCCGRHAVVDELVVATGLRPDLDFLREVRLSLDPALECPPELA
                     PLIDPNEHSCGTVRPHGARELAQPEPGFYFAGIKSYGRAPTFLMLTGYEQVRSIAAEI
                     AGDHEAARTVELVLPETGVCSGPGPLTNHAEVASGCCGGPAPAKADACCVADVEAKQE
                     GKAGCGCA"
     gene            complement(1734..2063)
                     /locus_tag="VF991_11530"
     CDS             complement(1734..2063)
                     /locus_tag="VF991_11530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013530552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9557121.1"
                     /translation="MKLDDAAARLEALGNPTRLKIYRMLVRAGEEGMPVGRLQARLDI
                     AASTLSHHLKALIGVGLVSQARDGTTLICHTNYPLMRDLIEYMVEQCCAEGTCAPAGA
                     SKLIKAA"
     gene            2170..2538
                     /locus_tag="VF991_11535"
     CDS             2170..2538
                     /locus_tag="VF991_11535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003614270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9557122.1"
                     /translation="METNTAVAALAALAQQNRLEVFRLLVQTGATGLPAGRIAERLGI
                     AAPTLSFHLAQLRHAGLVQMRRDGRSLIYAVNYDGMNGLMEFLTDNCCAGDAAACRVP
                     VCEPRSATIVRRRARRPARH"
     gene            2552..3067
                     /locus_tag="VF991_11540"
     CDS             2552..3067
                     /locus_tag="VF991_11540"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HEX9557123.1"
                     /translation="MTDRIYNVLFLCTGNSARSILAESIVNRGGRGRFKGFSAGSQPR
                     GEVHPYALDLLRSLRMPVEGLRSKSWDEFAVAGAPQMDFIFTVCDNAAGEACPAWPGQ
                     PMTAHWGVPDPAAGEGSEIERRAAFRQAFAALDNRIGIFLSLPIKSLDRMTLQARLNA
                     IGRADPSAAAA"
     gene            3076..3723
                     /locus_tag="VF991_11545"
     CDS             3076..3723
                     /locus_tag="VF991_11545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006327291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP/aquaporin family protein"
                     /protein_id="HEX9557124.1"
                     /translation="MLQPVAAEAIGTALLLAAVVGSGIMAERLSGGNAGLALLANAIA
                     TGGALFALIVMFGPISGAHFNPVVTLALAVRGECARGRVLPFLAAQVAAAVLGVWLAH
                     LMFDLPILQISTKVRSGIGQWSAEATATFGLVLLILLGARRQSPSLPAAVAVYIVGAY
                     WFTASTSFANPAVTIARALSDTFAGIAPADVLGFIAAQFVGGTLALAADRAFVVR"
     gene            complement(3720..5246)
                     /locus_tag="VF991_11550"
     CDS             complement(3720..5246)
                     /locus_tag="VF991_11550"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9557125.1"
                     /translation="MPSAIGRRALRQIAVVVALALLLPIAALGQTTRLTFLHTNDTYE
                     IVPTGGWGGFAQLMTVLKEQRATSANSLTTFGGDLLSPSIMSSFHRGAQMIELMNAVG
                     TDIAVLGNHEFDFGPDVLRRRIGESRFPWLATNVTRNGALLGGAADTVVREMGGVKVG
                     FFGLVTPETTRLSSPGPGIAFGAHRQAAEAAVRVLRERGAEVVVALTHLNFAEDREIA
                     RTVPGIALILGGHDHDALTMLEGSTLILKAGADARYLGVVDLTVVRRTPPSGPPTIDV
                     THAWRMIPVHGMASDPEVATLVKRYADQLDAELAVEIGTTTHPLDSRRLVVREGEAAI
                     GDLFADAVRAAVGAEAAVLNGGGIRGDRTYAAGSRLTRRDILTELPFGNSTVLLELKG
                     SDLLEALENGVSRVEERQGRFPQVSGLRFAYDPARPRMHRIVDASVNGQPLDPVRLYR
                     VATIDFLAGGGDGYVSLTRGRSLVDASGGQLTASQVIAYIAARKTVDAVVEGRIEVRR
                     "
     gene            complement(5314..5667)
                     /locus_tag="VF991_11555"
     CDS             complement(5314..5667)
                     /locus_tag="VF991_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF190 domain-containing protein"
                     /protein_id="HEX9557126.1"
                     /translation="MQIPKQAQLLRIFVGEADRQDGKPLYEAIVLKAREMQIAGATVI
                     RGGMGYGHSSHLHSAKILRLSDDLPLVIEIVDSPDKIDAFLPVLDGMMNDSMGSGLVT
                     LENVQVLQYGRQPAE"
     gene            complement(5671..6048)
                     /gene="crcB"
                     /locus_tag="VF991_11560"
     CDS             complement(5671..6048)
                     /gene="crcB"
                     /locus_tag="VF991_11560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEX9557127.1"
                     /translation="MVTLGGVIGSLLRWAVSFMQPWAEGGLPWATFAANASGCLVIGF
                     YAAFTGPDGRLFVGPRTRQFVMTGICGGYTTFSGFSLETFRFLSTGDGRSAALYLSIS
                     LASWLAAVWLGDVVARRLNNWRR"
     gene            complement(6138..6551)
                     /gene="crcB"
                     /locus_tag="VF991_11565"
     CDS             complement(6138..6551)
                     /gene="crcB"
                     /locus_tag="VF991_11565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEX9557128.1"
                     /translation="MSLPELLIGGAMVALGAMVGTPARFFVSGVIARRFGETFPWGTL
                     VVNVSGCVVMGAVAAFAHAHGLPSASDVWLLVATGFLGSYTTVSSFALQTLALVHDAE
                     RWPALGYIAGSLALCLAAVAGGFAAGSLALAGGGG"
     regulatory      complement(6719..6779)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01734"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Fluoride riboswitches increase expression of
                     downstream genes that help mitigate the toxic effects of
                     very high levels of fluoride; They are found in a wide
                     variety of bacteria and archaea; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="fluoride"
                     /db_xref="RFAM:RF01734"
     gene            complement(7053..7568)
                     /locus_tag="VF991_11570"
     CDS             complement(7053..7568)
                     /locus_tag="VF991_11570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557129.1"
                     /translation="MTPEETTVVAGIPIPSTSPIFLTVVGLHVLVGLVCVVAGAIAMF
                     SLKRSGRHPTFGTIYYWGLVAVFVSATGLSVVRWAEDYHLFILGLLALASASLGRAAR
                     RRRWTGWVRLHITGMGLSYILLLTAFYVDNGKSLPLWKELPPIVYWLLPAAAGLPLIV
                     NALFRHPLARH"
     gene            complement(7565..8026)
                     /locus_tag="VF991_11575"
     CDS             complement(7565..8026)
                     /locus_tag="VF991_11575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9557130.1"
                     /translation="MAMSATEVFPIGILSERSGVNIETIRYYERVGLLPRPARSSGGY
                     RLYQSRDAERLCFVRRARDLGFSLDEVGRLLDLADQKSRSCRRVHDIAAEHLAEVRMK
                     ITDLKRMERVLGTMVKTCAQGTMPTCPLLETLALGPAAIPRPFVQVGALKP"
BASE COUNT         1346 a         2686 c         2789 g         1286 t
ORIGIN      
        1 cgatcaggcg gtgcggcccg aagcggtcga ccagccggcc gatcgacggc gccgccagaa
       61 tgccgaggaa ggtgccgacg ctatagagca ccagcacgtt gtcgcgtgtc agcccgaggt
      121 cggacgcgac gggatcgatg aaagacgaga cgccgacggt ttggcccggc gtcgtcgcga
      181 acgtgccgac gagggcggca aatgccacca acgcaccgct caggcggggc gaccggccgg
      241 ccgatgcgac agctgcgggt tgactgccga atggtcccgg cggtcgcgcc gccgtcatgc
      301 gcagccgcag ccggctttgc cttcctgctt ggcttcgacg tcggccacgc agcaggcgtc
      361 ggccttggcc ggcgccggac cgccgcagca gccgctcgcc acttcggcgt ggttcgtaag
      421 aggacccggt cccgagcaga cgccggtctc gggcagcacc agctcgaccg tgcgtgcggc
      481 ctcgtggtcg ccggcgatct cggcggcgat cgagcgcacc tgctcgtagc cggtcagcat
      541 gaggaaggtc ggtgcccggc cgtagctctt gatgccggcg aagtagaagc cgggctcggg
      601 ctgcgccagc tcgcgcgcgc cgtgcggacg cacggtgccg cagctatgct cgttgggatc
      661 gatcagcggc gccagctcgg gcgggcattc cagcgccgga tcgagcgaca gccgcacctc
      721 gcgcaggaaa tcgaggtcgg gccgaaggcc ggtggcgacc accagctcgt caacgacggc
      781 gtggcggccg caacaggtgg cgcccgtgct gatgcgcagg cgcgcgccgt cgcggctgag
      841 atgcgagacc ttgaagcccg cctcgacgca gatcttgccg ctggcgacga gcttggcgaa
      901 agccgcaccc agtgcgccgc gtgccgcgag cttgtcgttg gcgccgccgc cgaaggcctt
      961 ctccggattg tcgccgcgca acaaccagat gacctgggtg gtcggcactt cgtccttcag
     1021 ccgcacgaga tcgatcaagg taccgatggc ggaatggccg gcccccagca ccgcgaccgt
     1081 cttgccggca tagcgctcgc gctcgcggcc cagcacgtcg ggcatgccgt aggcgaggcg
     1141 gtcctgcacc tcgtgctcgc cgatcgccgg tcggccatcg gcgccggccg gattgggcgt
     1201 gaaccacgtg ccggtggcgt cgatcaccgt atcggcgcgc agcgactccg gccccttgcc
     1261 gttctggtaa cggacttcga agggcgccgc ctcgcggccc ttggtcttgg ccttgtcgaa
     1321 gccgacgcgg ccgacgctgg tcaccaggct ctcggtgcgg acgcgatcct tgagcggcgt
     1381 gcgcgtcgcc agcggctcaa gatattgcgc cagaagctcg ccgccggtcg ggtacccgcc
     1441 gcccgacggc gcgttccatc cgaccgcggc gagcaggcgt ccggctgcct tgtcgatgtt
     1501 gtattcccag ggcgagaaca tgggcacatg gctccactgc cgcacggcgt ggcccgctgc
     1561 gggtccggct tcgagcacga ccggttccat gccgcgttcc agcacgtggg cggcggcggc
     1621 aaggccgacc gggccgccgc ccaggatggc gacggtcttg ccgcggttca gcgagtcggg
     1681 catggtatta ctcctatctt accggaataa tggaaatata aggacaaaaa aactcaggca
     1741 gcctttatga gcttcgacgc gccggcgggc gcgcaggtgc cctcggcgca gcattgctcg
     1801 accatgtact cgatcaggtc gcgcatcagc gggtagttgg tgtggcagat gagggtcgtg
     1861 ccgtcgcgcg cctggctcac caggccaacg ccgatcaggg ccttgagatg gtgcgagagg
     1921 gtcgaggcgg cgatgtcgag ccgggcctgc aggcggccca ccggcatgcc ttcttcgccg
     1981 gcgcgcacca gcatgcgata gatttttagc cgggtcgggt tgcccagggc ttccaggcgg
     2041 gcggcggcat cgtcgagctt catgatcggc aatctagtcc ggccgccgga attgtcaacg
     2101 gtatttctgg aaacttcgaa atagaaaagg tcattgacca atattccatg attcgataat
     2161 catgaaacca tggaaacgaa caccgccgtc gccgccttgg cggcgctcgc gcagcaaaat
     2221 cgtctcgagg ttttccgcct cctggtgcag accggcgcga ccggcttgcc ggcgggccgg
     2281 atcgccgagc gcctcggcat cgccgcaccg acgctctcct tccacctcgc gcagctccgg
     2341 catgccgggc tggtgcaaat gcgccgcgac ggccgttcgc tgatctacgc cgtcaactac
     2401 gacggcatga acggcctcat ggaattcctg accgacaatt gctgcgctgg cgatgccgcg
     2461 gcctgccgcg tgccggtctg cgagccgcgc tccgccacca tcgtgcggcg tcgtgcgcgc
     2521 cggccggcgc ggcactagac ggaggaggga agtgaccgac cgcatctaca acgtgctctt
     2581 tctctgcacc ggaaactcgg cacgcagcat cctggccgaa tcgatcgtca atcgtggcgg
     2641 tcgtggccgc ttcaagggtt tcagcgccgg cagccagccc cgcggcgagg tgcatcccta
     2701 tgcgctcgac ctgctgcgca gcctgcggat gccggtcgag ggcttgcgtt ccaaaagctg
     2761 ggacgagttc gcggtcgcgg gcgcgccgca aatggatttc attttcacgg tctgcgacaa
     2821 cgccgccggc gaggcctgtc ccgcatggcc cggtcagccg atgacggcgc attggggcgt
     2881 gcccgacccg gccgcgggcg agggcagtga aatcgagcgc cgtgccgcct tccgtcaggc
     2941 tttcgccgca ctggacaacc gtatcggcat cttcctcagc ctgcctatca aaagcctcga
     3001 tcgcatgacc ttgcaggcga ggctgaacgc gatcgggcgt gccgatcctt cggccgcggc
     3061 ggcgtgatgc gagccatgct acagccagtc gccgccgagg cgatcggcac ggcgctgctg
     3121 ctggcggcgg tcgtcggctc gggcatcatg gccgagcgcc tgtcgggtgg aaacgccggc
     3181 cttgccctgc tggccaatgc catcgccacg ggcggcgcgc tgttcgcact gatcgtcatg
     3241 ttcgggccga tttccggagc ccatttcaat ccggtggtga ccctggcgct tgccgtgcgg
     3301 ggcgaatgcg cgcgcgggcg cgtattgccg ttcctcgcgg cccaggtcgc ggcggccgtg
     3361 ctcggcgtct ggctcgccca cctgatgttc gatctgccga tcctgcagat ttccaccaag
     3421 gttcggtcgg gcatcggcca gtggtcggcc gaggcgacgg cgacgttcgg tctggtgctg
     3481 ctgatcctgt tgggcgcccg gcggcagtcg ccgtcgctgc cggccgccgt cgcggtctat
     3541 atcgtcggcg cctactggtt caccgcatcg acgtcgttcg ccaatccggc ggtgacgatc
     3601 gctcgtgccc tctcggatac attcgccggc atcgcgccgg ccgacgtgct gggcttcatt
     3661 gcagcgcagt tcgtgggagg taccctggca ctggcggccg accgagcctt cgtcgtgcgc
     3721 tagcggcgga cctcgatgcg gccctcgacg acggcatcca cggtcttgcg cgccgcaatg
     3781 taggcgatca cctggcttgc cgtgagttgc ccgccgctgg catcgaccag gctgcggccg
     3841 cgcgtcagag agacgtaacc gtcgccgccg ccggccagga agtcgatggt cgccacgcga
     3901 tagagacgca ccgggtcgag cggctggccg ttgacgctgg cgtcgacgat gcggtgcatc
     3961 ctcggacggg cagggtcgta ggcgaagcgc agaccggaca cctggggaaa tcggccctgc
     4021 cgctcctcga cccggctgac gccgttttcc agcgcttcca acaggtcgct gcccttcagt
     4081 tcgagaagca cggttgaatt gccgaacggc agctcggtca ggatgtcgcg gcgcgtgagc
     4141 cgactacccg ccgcgtaggt acggtcgccg cggatgccgc cgccgttcag cacggccgcc
     4201 tcggcaccga cggcggcgcg gacggcgtcg gcgaacaggt cgccgatcgc ggcctcgccc
     4261 tcgcgcacca ccagccggcg gctgtcgagg gggtgggttg tggtgccgat ttcgacggcc
     4321 agctcggcgt cgagctggtc ggcgtaacgc ttcaccaggg tggctacttc gggatcggac
     4381 gccatgccgt gcaccgggat catgcgccag gcatgcgtca catcgatggt cggcggcccc
     4441 gacggcggag tccgccttac gacggtgaga tcgacgaccc cgagatagcg cgcgtcggct
     4501 cccgccttga ggatcaaggt gctgccttcg agcatcgtca gggcgtcatg gtcgtggccg
     4561 ccgagaatga gggcgatgcc cggtacggtt cgggcaatct cgcgatcctc ggcgaaattg
     4621 agatgggtga gcgccacgac gacttcggcg ccccgctcgc gcagcacgcg caccgcggcc
     4681 tcggctgctt gccggtgcgc gccgaaggca atgcccggtc cggggctcga caggcgcgtc
     4741 gtttcgggcg tgaccaggcc gaaaaagccc accttcacgc cgcccatctc gcgcacgacg
     4801 gtgtcggcgg cccccccgag aagcgcgccg ttgcgcgtga cgttggtggc gagccatggg
     4861 aagcgcgatt cgccgatccg ccggcgcagc acgtcggggc cgaaatcgaa ctcgtggttg
     4921 ccgagcacgg cgatatcggt gcccacggca ttcatcagct cgatcatctg ggcgccacga
     4981 tggaagctgg acatgatcga aggcgacagc aggtcgccgc cgaaggtggt gagcgaattg
     5041 gccgaggtcg cgcgctgctc cttgagcacc gtcatgagct gggcgaagcc gccccagccg
     5101 cccgtcggca cgatctcgta ggtatcgttg gtgtgcagga aggtgagccg cgtcgtctgg
     5161 cccagcgcgg cgatcggtag caagagggcg agggcgacaa cgacagcgat ctgccgcaag
     5221 gcgcgacggc caatggcact aggcatcgat ttccccctta tcgagctggc ttgccgagct
     5281 tcggccgtgg cctggaacca agcgtgaggt ttctcattcg gcgggctggc ggccgtattg
     5341 cagcacctgg acgttctcca gcgtgaccag gccgctgccc atgctgtcgt tcatcatgcc
     5401 gtcgagcacg ggcaggaagg cgtcgatctt gtccgggctg tcgacgatct cgatcaccag
     5461 cggcaggtcg tccgacagcc gcaggatctt ggcgctgtgc agatggctgg agtggccgta
     5521 gcccatgccg ccgcgaatca cggtggcgcc ggcgatctgc atctcgcgcg ccttgagcac
     5581 gatcgcctcg tacagcggct tgccgtcctg ccggtcggcc tcgccgacga agatgcgcag
     5641 aagctgcgcc tgcttgggaa tctgcatggt tcaccttctc cagttgttga gccgccgcgc
     5701 caccacgtca cctagccaga ccgcggccag ccagcttgcg agcgagatcg aaagatagag
     5761 ggccgccgag cgtccgtcgc cggtcgacag gaagcggaaa gtctccaggc tgaagcccga
     5821 gaaggtcgtg tagccgccgc agatcccggt catgacgaat tggcgtgtac gcggcccgac
     5881 gaacagccgc ccgtcggggc cggtgaaggc ggcgtagaag ccgatgacca ggcagcccga
     5941 cgcattggcg gcgaaggtgg cccacggcag gccgccctcc gcccagggct gcatgaacga
     6001 taccgcccag cgcaaaaggc tgccgatcac gccgcccagc gtgaccacgc catagaggcc
     6061 ggccgcgtcg gcgatggcgc gccgacgccg gcgccaggcg ccggcatggt gcggtacagc
     6121 ggtcggctcg ttcgcgttca gccgccgcct cccgccaacg cgagcgagcc tgcggcgaag
     6181 ccgccggcaa ccgccgccaa acaaagcgcg agggaaccgg cgatataacc gagcgcgggc
     6241 cagcgctcgg cgtcatgcac gagggcaagg gtctgcagcg caaacgagga gaccgtcgtg
     6301 tagctgccga gaaaaccggt ggcgacgagg agccagacgt cggaggcgga cggcaggccg
     6361 tgggcatggg cgaaggccgc caccgctccc atgaccacgc agccgctgac gttcaccacc
     6421 agggtgcccc aggggaaggt ctcgccgaac cgtcgggcga tgacgcccga cacgaagaaa
     6481 cgcgccggcg tgccgaccat ggcgcccaag gcgaccatcg cgccgccgat cagcagttcg
     6541 ggcaaggaca tcgcgccgat ccccggttgt ctctcggttt accggtggcg ccggcgcgcc
     6601 gcctcggcca gtttctccag agggttgcga tgagggccag ttccggcgag ggccagttcc
     6661 ggccacaacg ccgtctgcgc ccacacttga gtcatggaat cctcctacca cggcaaagcg
     6721 tctggtagga gtcatcagcc tcgcggcggt tgtcggggga ccccatcccc atctgttcga
     6781 tggaaccgta gccaagttga aattgatggt caaattggcg tgcagcgcag gggcgcgaga
     6841 aggtcggcga aggcagctcg gggccatggc cagccggcgt gggcggcaag cgcaacgaag
     6901 gtgtcgcggc attcgtcatg cagacgcgca actccatcgg tgcacacgcc tttgcgggta
     6961 tggatcgagg ttggcgcttc ccctctgggc attaggcggc cgacgcggca cgaaccgagc
     7021 gtcttccctt gagtccttcc tcaccgcgcc gtctagtgac gcgcgagcgg atggcgaaac
     7081 agggcattga cgatgagcgg caacccggcc gcggcgggca atagccagta cacaatcggc
     7141 gggagttcct tccacagcgg caggctcttg ccgttgtcga catagaaggc ggtcagcagg
     7201 aggatgtagg aaaggcccat gccggtgatg tgcagtctca cccaaccggt ccagcgccgc
     7261 cgccgggcgg cgcgcccgag ggaagcggag gcaagcgcca gcagtccgag aatgaacaga
     7321 tgatagtcct cggcccaacg aaccacggac aggccggtcg ccgatacgaa cacggccacc
     7381 aggccccagt agtagatcgt gccgaacgtc ggatgacggc cgctgcgctt gaggctaaac
     7441 atcgcgatgg caccggcgac cacgcagacc agtcctacca agacatgcag gcccaccacg
     7501 gtcaggaaga tcggcgacgt ggacggtatc gggattcccg ctacgacagt cgtttcctcg
     7561 ggtgtcacgg ctttaaggcc ccaacttgga cgaacgggcg cggaatggca gctggaccaa
     7621 gcgccaacgt ctccaagagc ggacaagtcg gcatcgtgcc ttgcgcgcac gtcttcacca
     7681 tggtgccgag aacgcgctcc atgcgtttga ggtcggtgat cttcatccgg acttccgcca
     7741 gatgttccgc cgcgatgtcg tgcacgcggc ggcacgagcg cgatttctga tcggcgagat
     7801 cgagcaagcg accaacctcg tcgagagaga agccgagatc ccgcgcacga cggacgaaac
     7861 aaagacgctc ggcgtcgcgc gactgataga gccggtatcc accgctgctg cgggccgggc
     7921 ggggcagcag gccgacgcgt tcatagtaac ggatggtctc gatattcacg ccggagcgct
     7981 cggatagaat gccgatcgga aagacttcgg tcgctgacat ggccatcaca ttcctttgat
     8041 ctgccaggca ttgagcctgt agtcactaca gggtgtaggt ctttgggcat gatgaaaagc
     8101 aaaacct
//
LOCUS       DASWGA010000483         5109 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1442956, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000483 DASWGA010000000
VERSION     DASWGA010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5109
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1442956"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..407
                     /locus_tag="VF991_11580"
     CDS             <1..407
                     /locus_tag="VF991_11580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557131.1"
                     /translation="GGFKVDMQSMDWQTLVARRAKKDPPTAGGWHAFLTSWVSADILN
                     PVMMGFLNTSCEKAMFGWPCDPTIEKFRDQFARESDPAKQKQIVEALQTYWAMNPTHV
                     NLGQWYQPAAMRTSLDGAVVAPVTVFWNVTKK"
     gene            512..2080
                     /locus_tag="VF991_11585"
     CDS             512..2080
                     /locus_tag="VF991_11585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557132.1"
                     /translation="MRRTLAAIAAGAALAAAGPVLAQGKVLRFVQNGNLTILDPIWTT
                     AYVTRNHGYLIYDTLFASDESNAVKPQMVDKYEVSPDKLTWTFTLRDGLEWHDGKPVT
                     SEDCISSIQRWGKRDTMGIKFMDFIKEYKAVDAKTFQIVLKEPYGLVLDSLGKPSSNV
                     PFMMPKAVADTDAFKQIDSQIGSGPFIYQKDQSKPGEKHVYLKNPKYKPRAEPASGLA
                     GGKIAKVDRVEIVEMPDVQQQVNALIAGEIDLVEQPPHDLLSVLKADKNVVLEDWNPL
                     GHVFVIRFNHVVKPFDNPKIRLAALYSMRQEDYLKATIGDPAYYKVCPAAFICGTPNA
                     SDKTNGLLIKPDFEKSKALLKEAGYDGTPIVLMQSTTLPVLTNMAPVTKSLLEQGGFK
                     VDMQSMDWQTLVTRRTKKDPADKGGWNAFHTFSVSADALNPISNSYFAANGDKAWFGW
                     PTDPEMEKLRDAYARETDPAKGKALAEAVQLRAVETAEFGWLGQWYGPGARRANVTGW
                     LKAPVPVMWNIEKK"
     gene            2190..3131
                     /locus_tag="VF991_11590"
     CDS             2190..3131
                     /locus_tag="VF991_11590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557133.1"
                     /translation="MLDFIARRLVAIIPVLAVVAVFVFLMLRLTPGDPAAVIAGDNAT
                     SDQIADIRAKLGLNEPIWTQFAIWIGNVLQGNFGESFFFKKTVAELIAQRIEPTLALT
                     TCTLIIALSLALPLGVLAAWKHGSLIDRFVMAFSVMGFSVPSFVIGYCLIYVFAIELG
                     WLPVQGYIRIGVDFWGFLERMVLPSFTLGIIFIALIARITRASVLEVLNEDYIRTARA
                     KGLSNRVVLMRHALRNAAVPILTVIGIGIALLIGGAVVTESVFGLPGLGRLTVEAVLS
                     RDFPTIQTVILLFSVVYVLINLLIDISYTLFDPRIRY"
     gene            3128..4066
                     /locus_tag="VF991_11595"
     CDS             3128..4066
                     /locus_tag="VF991_11595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557134.1"
                     /translation="MSAILDEDVVDSASIAAASTKRRSLWALAIRNSSVIVGGAILLI
                     MLAIALLAPVLGTVDPTRIDPAARNKKPGTEITFRLDDGLTAKRTVLMGTDSLGRDVY
                     SRVIYGTRVSLMIGVAVAIAAVSIGLVIGLVSGYIRWLDGIIMRIMDGLMAIPGILLA
                     IALVSIWRAGLITVIFAIVVPDVPRVVRLVRSVVLTVREEPYVEGAISVGTPTWTLMF
                     RHILPNTVAPLIVQGTFIAAAAILAEAILSFLGIGIPPEIPSWGNIMAEGRTLFRVFP
                     HNILYPGIFLALTVLAVNIMGDGLRDTLDPKMSKKV"
     gene            4098..>5109
                     /locus_tag="VF991_11600"
     CDS             4098..>5109
                     /locus_tag="VF991_11600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557135.1"
                     /translation="MSAEKKPVLEVRNLTVALPAGADRAHAVEKVSFTVNPGEIVCLV
                     GESGSGKSVIAFTVMGLLAKALKPTAGEILLEGENVLAAGEGRLRELRCTRMSMIFQE
                     PMTALNPVMTCGQQIDEVLETHTKLDPVQRKAKIIAILNRVKLPEPERIYASYPHQLS
                     GGQRQRIMIAMALVLDPVLLIADEPTTALDVTTQAEILKLIAELQAGQGTGVLFITHD
                     FGVVAEIAHRVAVLRWGELVEMGKTEQILSRPEHGYTKMLISSVPSIHPVHRGVRKDG
                     ITVLRTEKLGKTYSGSAFFQKARVVKAAVDVDLDIRKGETLGIVGESGSGKSTVARCI
                     ARL"
BASE COUNT          908 a         1730 c         1597 g          874 t
ORIGIN      
        1 agggcggctt caaggtcgac atgcagtcga tggactggca gacgctggtg gcgcgccgcg
       61 cgaagaagga cccgccgacg gcgggcggct ggcacgcctt cctcacctcg tgggtctcgg
      121 ccgacatcct gaacccggtg atgatggggt tcctgaacac ctcctgcgag aaggccatgt
      181 tcggctggcc gtgcgacccc accatcgaga agttccgcga ccagttcgcc agggaatccg
      241 accctgccaa gcagaagcaa atcgtcgagg ccctgcagac ctactgggcg atgaatccga
      301 cccacgtcaa tctcggccag tggtatcagc cggccgccat gcgcaccagc ctcgacggcg
      361 cggtcgtggc gccggtgacg gtgttctgga acgttacgaa gaagtagcgg tgcgcgcggg
      421 gcgcgagccc cgcgcccatc gatgaaggcg gaccggggac cgccttcttc catgggaagg
      481 aaaccttgag ggggctttta tgaaattggt catgagacgg acattggcag cgatcgccgc
      541 cggtgcagca ttggcggcag ccgggccggt attggcgcaa ggcaaggttc tgcgcttcgt
      601 gcagaacggc aacctgacga tcctcgatcc gatctggacc acggcctacg tcacgcgcaa
      661 ccacggctac ctgatctacg acacgctgtt tgcgtcggac gagagcaacg cggtgaagcc
      721 gcagatggtc gacaagtacg aggtgtcgcc cgacaaactc acctggacct tcacgttgcg
      781 cgacggcctg gaatggcacg acggcaagcc cgtgacctcc gaggactgca tctcctccat
      841 ccagcgctgg ggcaagcgcg acacgatggg gatcaagttc atggacttca tcaaggagta
      901 caaggcggtc gacgccaaga ccttccagat cgtgttgaag gagccctacg gcctggtgct
      961 cgactcgctc ggcaagccgt cctccaacgt gcccttcatg atgcccaagg cggtcgccga
     1021 caccgacgcc ttcaagcaga tcgacagcca gatcggatcg ggacccttca tctaccagaa
     1081 ggaccagtcc aagcccggcg agaagcacgt ctacctgaag aatcccaagt acaagccgcg
     1141 cgccgagccg gcgtcgggcc tggccggcgg caagatcgcc aaggtcgacc gcgtcgaaat
     1201 cgtcgagatg ccggacgtcc agcagcaggt caacgcgctg atcgccggcg agatcgacct
     1261 ggtcgagcag ccgccgcatg atctcctgtc ggtgctgaag gccgacaaga acgtggttct
     1321 cgaagactgg aacccgctcg gccacgtctt cgtcatccgc ttcaaccacg tggtgaagcc
     1381 gttcgacaac ccgaagatcc gcctggccgc gctctactcg atgcgccagg aggactacct
     1441 caaggccacc atcggcgatc cggcctacta caaggtctgc ccggccgcct tcatctgcgg
     1501 cacgcccaac gcgtccgaca agaccaacgg cctcttgatc aagcccgact tcgagaagtc
     1561 caaggcgctt ctgaaggagg cgggctacga cggcacgccg atcgtcctga tgcagtcgac
     1621 gacgctgccg gtgctcacca acatggcgcc ggtcaccaag tcgctgctcg agcaaggcgg
     1681 cttcaaggtc gacatgcagt cgatggactg gcagaccctg gtcacgcgcc gcaccaagaa
     1741 ggatccggcc gacaagggcg gctggaacgc cttccacacc ttctcggtgt cggccgacgc
     1801 gctgaacccg atttcgaact cctacttcgc cgccaacggc gacaaggcgt ggttcggctg
     1861 gccgaccgat ccggaaatgg agaagctgcg cgacgcctac gcccgggaga ccgacccggc
     1921 caaaggcaag gcgctggccg aagccgtcca gttgcgcgcc gtcgagacgg cggaattcgg
     1981 ctggctcggc cagtggtatg gcccgggtgc gcgccgcgcc aacgtcaccg gctggctgaa
     2041 ggcgccggtg ccggtgatgt ggaatatcga gaagaagtga caccgtggcc gcctgccggg
     2101 cggccacggt gtcatcctga gcgaagcgaa ggatctttcg ggatcagcaa aggcccctcg
     2161 cttcgctcgg ggtgacagac aggggttaaa tgctcgactt catcgcccgc cgcctcgtcg
     2221 ccatcatccc cgttcttgcg gtggtggcgg tgttcgtctt cctcatgctc aggctgacgc
     2281 cgggcgatcc ggcggcggtg atcgccggcg acaacgcgac ctccgaccag atcgccgaca
     2341 tccgcgccaa gctcgggctg aacgagccga tctggaccca gttcgccatc tggatcggca
     2401 acgtcttgca gggcaatttc ggcgaaagct tcttcttcaa gaagacggtg gccgagctga
     2461 tcgcccagcg catcgagccg accctggcgc tcaccacctg caccctgatc atcgcgctca
     2521 gcctcgccct gccgctcggc gtgctcgccg cctggaagca cggttcgctg atcgaccgct
     2581 tcgtgatggc cttctcggtg atgggcttct cggtgccgtc cttcgtcatc ggctattgcc
     2641 tgatctacgt cttcgccatc gagctcggct ggctgccggt gcaaggctat atccgcatcg
     2701 gcgttgactt ctggggcttc ctcgagcgca tggtcctgcc ctccttcacg ctgggcatca
     2761 tcttcatcgc cctgatcgcc cgcatcaccc gcgcgagcgt gctcgaagtg ttgaacgagg
     2821 actacatccg caccgcccgc gccaagggcc tcagcaaccg ggtcgtgctg atgcgccatg
     2881 cgctgcgcaa cgccgccgtg ccgatcctga ccgtgatcgg catcggcatc gcgctcctga
     2941 tcggcggcgc ggtggtgacc gaaagcgtct ttggcctgcc cgggctcggc cggctcacgg
     3001 tcgaggccgt gctgagccgc gacttcccga ccatccagac ggtgatcctg ctgttctcgg
     3061 tggtctacgt cctgatcaac ctgctgatcg acatcagcta caccctgttc gacccgagga
     3121 tccgctattg agcgcgattt tagacgaaga cgtcgtcgac tccgcctcga tcgcggcggc
     3181 ctcgaccaag cgccggagcc tgtgggctct cgccatccgc aattcgtcgg tcattgtcgg
     3241 cggcgccatc ctgttgatca tgctggcgat cgccctcctg gcgcccgttc tcggcaccgt
     3301 ggatccgacg cgcatcgatc cggcggcgcg caacaagaag cccggcaccg agatcacttt
     3361 ccgcctcgac gacggcctca ccgccaagcg cacggttctc atgggcaccg acagtttggg
     3421 ccgcgacgtc tacagccgcg tgatctacgg cacacgggtg tcgctgatga tcggcgtcgc
     3481 cgtcgccatc gccgcggtgt cgatcggcct cgtgatcggc ctggtgtcgg gctacatccg
     3541 atggctcgac ggcatcatca tgcgcatcat ggacgggctg atggccatac caggcatatt
     3601 gctcgccatc gcgctggtct cgatctggcg cgccggcctg atcaccgtga tcttcgccat
     3661 cgtcgtgccc gatgtgccgc gtgtcgtgcg cctggtgcgc tccgtcgtgc tgacggtgcg
     3721 cgaggagccc tatgtcgagg gcgccatctc ggtcggcacg ccgacctgga ccctgatgtt
     3781 ccgccacatc ctgcccaaca cggtggcgcc gctgatcgtg cagggcacct tcatcgccgc
     3841 cgccgccatc ctggccgagg cgatcctgag cttcctcggc atcggcatcc cgccggaaat
     3901 cccgagctgg ggcaacatca tggccgaggg ccgcaccctg ttccgcgtgt tcccgcacaa
     3961 catcctctat cccggcatct tccttgcact gacggtgctg gccgtgaaca tcatgggcga
     4021 cggcctgcgc gacacgctcg atccgaagat gagcaagaaa gtgtgatgcg cagcatgacg
     4081 gtgtgtttgg tgtatcgatg agcgcagaga agaagccggt cctcgaagtc cgcaatttga
     4141 ctgttgccct gccggccggc gccgaccgcg cccatgccgt cgaaaaagtg agcttcacgg
     4201 tcaatcccgg agagatcgtc tgcctggtag gcgaatcggg ctcgggcaag tcggtgatcg
     4261 ccttcaccgt catgggcctg ctcgccaagg cgctgaagcc gaccgcgggc gagatcctgc
     4321 tcgaaggcga gaacgtcctg gccgccggcg aggggcggct gcgcgagctg cgctgcacgc
     4381 gcatgtcgat gatcttccag gaaccgatga ccgcgctcaa tccggtcatg acctgcggcc
     4441 agcagatcga cgaggtgctg gagacccaca ccaagctcga tcccgtccag cgcaaggcca
     4501 agatcatcgc catcctcaac cgggtgaaac tgcccgagcc ggagcgcatc tacgcctcct
     4561 acccgcacca gctctcgggc ggccagcgcc agcgcatcat gatcgccatg gccctggtgc
     4621 tcgaccccgt gctgctgatc gccgacgagc cgacgacggc gctcgacgtc accacccagg
     4681 ccgagatcct gaagctgatc gccgagctgc aggccggcca aggcaccggc gtgctgttca
     4741 tcacccacga tttcggcgtg gtcgccgaga tcgcccatag ggtcgccgtg ctgcgctggg
     4801 gcgagctggt cgagatggga aagaccgagc agatcctgtc gcggcccgaa cacggctaca
     4861 ccaagatgct gatctcctcg gtgccgtcga tccatcccgt gcaccgcggc gtgcgcaagg
     4921 acggcatcac cgtgctgcgc accgaaaagc tcggcaagac ctacagcggc agcgccttct
     4981 tccagaaggc gcgcgtcgtc aaggccgccg tcgatgtcga tctcgacatc cgcaagggcg
     5041 agaccctggg catcgtcggc gaatcgggct cgggcaagtc gacggtggcg cgctgcatcg
     5101 cccggctga
//
LOCUS       DASWGA010000484         1646 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_568690, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000484 DASWGA010000000
VERSION     DASWGA010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_568690"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VF991_11605"
     CDS             complement(<1..217)
                     /locus_tag="VF991_11605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEX9557136.1"
                     /translation="MFAKILIANRGEIACRVIKTARRLGIKTVAVFSDADRGARHVAL
                     ADEAVHIGASPARDSYLVADKIIDAARR"
     gene            complement(217..999)
                     /locus_tag="VF991_11610"
     CDS             complement(217..999)
                     /locus_tag="VF991_11610"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9557137.1"
                     /translation="MTSTVLTRIDDGVATLTLNRPKAMNALDADTARAIVEAVDSFTA
                     DPAVRVMVVGAAGKGFSAGGDFNWVLTWPNLDAITRRVGADAVMGAVQAIYDFPKPSI
                     ARVQGAAVGGGVGLMLACDFAIAAAPARFGLTSVRNGLLAGIAIPVLIEAVGPRVARQ
                     LMMHGGMFDARTALRVGLVDQVVEADALASTVATLAGELKLGAPSVQTTIKKLIPEID
                     ALAHDTNVADILGEQVANQCVTDEALEGMSAFLDKRKPKWAL"
     gene            complement(1007..>1646)
                     /locus_tag="VF991_11615"
     CDS             complement(1007..>1646)
                     /locus_tag="VF991_11615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010973074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX9557138.1"
                     /translation="GTTIVTGFARIWGYPIGIVANNGILFNESALKASHFIELCGQRG
                     IPLLFLQNITGFMVGRKYEAGGIARDGAKMVTAVSTVGVPKFTVIIGGSYGAGNYGMC
                     GRAYGPRFLWMWPSARISVMGGEQAASVLATVRRDNIEARGGKWSTEEEEAFKQPIRQ
                     QYDREGHPYYATARLWDDGILDPVDTRMALALGLSASMNQPIGPTKFGVFRM"
BASE COUNT          265 a          555 c          558 g          268 t
ORIGIN      
        1 tgcgcctggc cgcgtcgatg atcttgtcgg cgaccagata gctgtcgcgg gccggcgagg
       61 cgccgatatg cacggcttcg tcggccagcg cgacgtgacg cgcgccgcga tcggcgtcgg
      121 aaaaaacggc gaccgtcttg atgccgagcc ggcgcgccgt cttgatgacc cggcaggcaa
      181 tctcgccgcg attggcgatg aggatcttgg cgaacatcaa agcgcccact tgggcttgcg
      241 cttgtcgagg aaggcgctca tgccctcgag cgcctcgtcg gtgacgcact ggttggcgac
      301 ctgctcgccc aggatatcgg caacgttggt gtcgtgcgcc agggcatcga tctcgggaat
      361 gagcttcttg atcgtggtct ggaccgacgg cgcgccgagc ttcaattcac ccgccagggt
      421 cgccactgtg gaggcgagcg cgtcagcttc cacgacctga tcgaccaggc cgacgcgcag
      481 cgcggttcga gcgtcgaaca tgccgccatg catcatcagc tggcgcgcca cccgcggccc
      541 caccgcctcg atcagcaccg ggatggcgat gcccgccagc aggccgttgc gcaccgaggt
      601 cagcccgaag cgcgccggcg cggcggcgat ggcgaagtcg caggccagca tcaggccgac
      661 gccgccgccc accgccgcgc cctggacgcg ggcgatcgaa ggcttgggaa aatcgtagat
      721 cgcctgcacc gcgcccatca cggcgtcggc gccgacccgc cgcgtgatgg catcgaggtt
      781 gggccaggtc agcacccagt tgaaatcgcc gccggcggag aagcccttgc cggcggcgcc
      841 caccaccatc acccggacgg ctggatcggc ggtgaacgag tcgaccgctt cgacgatggc
      901 gcgcgcggta tcggcgtcca aggcgttcat cgccttcggc cggttgaggg tcaaggtcgc
      961 cacgccgtcg tcgattcgcg tcaggacagt cgaggtcatg gtccgatcac atccggaaga
     1021 cgccgaattt ggtcgggccg atcggctggt tcatcgatgc cgagaggccg agagccagcg
     1081 ccatgcgcgt atcgaccggg tcgaggatgc cgtcgtccca cagccgcgcc gtggcgtagt
     1141 aaggatggcc ctcgcggtcg tactgctggc ggatcggttg cttaaaagct tcttcctctt
     1201 ccgtcgacca cttgcctcct cgcgcctcga tgttgtcgcg ccgcacggtc gccagcacgc
     1261 ttgccgcctg ctcgccgccc atcaccgaga tgcgtgcgct cggccacatc cacaggaagc
     1321 gcggcccgta ggcgcggccg cacatgccgt aattgccggc gccgtagctg ccgccgatga
     1381 tcacggtgaa tttcgggacg ccgacggtgg acactgcggt caccatcttg gcgccgtcgc
     1441 gggcgatgcc gcccgcctcg tacttgcggc cgaccatgaa gcccgtgatg ttctgcagga
     1501 acaagagcgg aatgccgcgc tggccgcaca gctcgatgaa gtgcgaggcc ttcagcgccg
     1561 attcgttgaa caggatgccg ttgttggcga cgatgccgat cggatagccc cagatgcggg
     1621 cgaagccggt gacgatggtc gtgccg
//
LOCUS       DASWGA010000485         5797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1957026, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000485 DASWGA010000000
VERSION     DASWGA010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5797
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1957026"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..514)
                     /locus_tag="VF991_11620"
     CDS             complement(<1..514)
                     /locus_tag="VF991_11620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012091821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEX9557139.1"
                     /translation="MQAAKNVLLIVVDQWRGLMLPKLGAGYLKLPNIDRLCAEGVTFR
                     NHFTQTAPCGPARASLLTSLYQMNHRAVQNTIPLDARFTNLGHELRRGGYDAALVGYT
                     TTTPDPRTTGPDDPRFLVLGDIMEGFRPVGAFEPYKDAYFGWVANQGYKLPENREDIW
                     LPEGAAPKGEP"
     gene            586..1617
                     /locus_tag="VF991_11625"
     CDS             586..1617
                     /locus_tag="VF991_11625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-terminal binding protein"
                     /protein_id="HEX9557140.1"
                     /translation="MARFKIVTTGPGGSDHSLEMETLGTIGAEIVEVAGGDDDLAKAV
                     ADADAIYAKGRPRITAKVIEAGKKLKVVSLGSVGVDSVDVDAATKLGIPVTNCPDTFI
                     EEVADHAMTLILASWRRLVVQDQLVRKGEWTKARPMLYQFPRLMGMTLGFVAFGHVAR
                     AVARRAAPFGFQMLAYDPYIEELVMSDYDVQPVGLDELLQRSDIISMHAPGTKDAHHL
                     LKEPHFRKMKKTALFVNTGRGSTVDETAMIKALQEGWIAGAGLDVLETEPVGHNNPLL
                     GMDNVTLTAHVASASTRFDIARKRRVGAELSLVLSGKWPRACVNPAVLEKSKLERWQP
                     FSMERGPGN"
     gene            complement(1786..1986)
                     /locus_tag="VF991_11630"
     CDS             complement(1786..1986)
                     /locus_tag="VF991_11630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557141.1"
                     /translation="MRKPTDLMAVDVHTDDVGDYSVTEPGWYAVDDGGKVVLGPFDSL
                     ALCERAIRERRRMSVVDKKPPV"
     gene            2266..3300
                     /locus_tag="VF991_11635"
     CDS             2266..3300
                     /locus_tag="VF991_11635"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEX9557142.1"
                     /translation="MLGRVGQAEPGLRLRGARDIELYRTLAPAVALILTDKSEGSASL
                     IASKPGTPATSGTLLTNAHVVGDASEVAVIFKPAQGGAKINPADAVIGRVRKVDPVRD
                     LALVEVANLPANVTVIALGTMKDVAVGADVHAIGHPSGQTWTYTKGLVSQIRSEFQWQ
                     PDPSGTRHLAEVIQTQTPINPGNSGGPLIDESGRLIGVNSFKGTGELLNFAVSVREVE
                     KFLTAAQGGAFEPKLAAATSKPCAVKVMYEGRNQKDDAFIRNVDLDCSGRANATLYVP
                     DDKSKPIVFRIDTNHDGKVDAEIYDVDRDGKWDYSLWDTDFDGKPDLIGYHPDGKLKP
                     SRYEKYQPKP"
     gene            complement(3466..4368)
                     /locus_tag="VF991_11640"
     CDS             complement(3466..4368)
                     /locus_tag="VF991_11640"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9557143.1"
                     /translation="MVEVVLHEGDAPLDPAGLIAAAREVDLIVADRATPVPGEIFAGL
                     SRLKVVMRSAIDIRNIDVAAASSAGVLVTHAEAGFVQSVVELTLGFLVDLSRGVSRAA
                     ADYHAGRLPEIKVGRQLGGSTVGIIGYGRISRALAPLLAALGAKVLVSDPYAQVDDQR
                     LVKLPFEELLARSDYVVCLAIANEETESLMDAAAFARMKPEAFFINMSRGNLVDEAAL
                     ASALTEGRIAGAALDVGRAPDQMPSPALAALPNVIATPHIGGLTPPASESQAFDTVRQ
                     VEALVQGKVPPGAVNLDRWTRRPG"
     gene            complement(4456..4890)
                     /locus_tag="VF991_11645"
     CDS             complement(4456..4890)
                     /locus_tag="VF991_11645"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF013392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEX9557144.1"
                     /translation="MKILIIHGAGMTMRGKAQVEIFGPMTLPEYDAKIRGYAQELGVE
                     VEIFHSNIEGEVINRLFAAHDEGIAGAIINPAGYTRGYPALVAAIGNVGYPTIEVHIS
                     NPARRGAVSEVATSSLGTISGFGIEGYALALRGLRDRAKAQG"
     gene            5027..5746
                     /locus_tag="VF991_11650"
     CDS             5027..5746
                     /locus_tag="VF991_11650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEX9557145.1"
                     /translation="MSTLKAASRDKLKAVSTATVATALFKRGFRNQAIQNVHPLSPVQ
                     PVLVGPAFTLRYMPAREELNRLEVFRDRGHPQRKAVEDCPPGAVLVMDSRKDARAASA
                     GAILVTRLMKRGVAGVVTDGGFRDSAEIVRLGFPAYHQRPSAPTNLTLHQAIDIDVPI
                     GCGDAPVFPGDTILGDGDGVIVIPASLVDEIAEEAFEMTAFEDFVGEQVNKGHGIYGL
                     YPPTSEQTLADFAAWRKMKGR"
BASE COUNT          987 a         1911 c         1950 g          949 t
ORIGIN      
        1 ccggctcgcc cttgggcgca gcgccttccg gcagccagat gtcctcgcgg ttctcgggca
       61 gcttatagcc ctggttcgcc acccagccga aataggcatc cttgtagggt tcgaaggcgc
      121 cgaccgggcg gaagccctcc atgatgtcgc ccagcaccag gaagcgcggg tcgtccgggc
      181 cggtggtccg cgggtcgggc gtagtcgtgg tgtagccgac caaggcggcg tcatagccgc
      241 cgcgccgcag ctcatggccg agattggtga agcgggcatc gagcggaatg gtgttctgca
      301 ccgcccggtg gttcatctgg taaaggctgg tcagcaggct ggcccgcgcc ggcccgcacg
      361 gcgcagtctg ggtgaagtgg ttgcggaagg tgacgccctc ggcgcatagc cggtcgatgt
      421 tcggcagctt caggtaaccc gcccccagct tgggcagcat caggccgcgc cattggtcga
      481 cgacgatcaa taggacgttc ttggcggctt gcatgtcgat acacctgggt tggatggccg
      541 cgggtttgcg ctagagtgcc gtcaaattag tggaggagac aacacgtggc gcgtttcaag
      601 atcgttacga ccggccccgg cggcagcgac cattcgctgg aaatggagac cctcggcacc
      661 atcggcgcgg aaatcgtcga ggtggcaggc ggcgacgacg acctggccaa ggcggtggcc
      721 gatgccgacg cgatctacgc caagggccgg ccgcgcatca ccgccaaggt gatcgaggcg
      781 ggcaagaagc tgaaagtggt gtcgctgggc tcggtcggcg tcgactcggt cgatgtcgat
      841 gccgcgacca agctcggcat cccggtgacc aactgccccg acaccttcat cgaggaagtg
      901 gccgaccacg ccatgaccct gatcctggcg tcgtggcggc ggctggtggt gcaggaccag
      961 ttggtgcgca agggcgaatg gaccaaggcc aggcccatgc tctaccagtt cccgcggctg
     1021 atgggcatga ccctggggtt cgtcgccttc ggccacgtcg cccgtgccgt cgcccggcgc
     1081 gccgccccgt tcggcttcca gatgctggcc tacgatccct atatcgagga gctggtgatg
     1141 tccgactacg acgtgcagcc ggtcgggctc gacgagcttt tgcagcgctc cgatatcatc
     1201 tcgatgcatg cgcccggcac caaggacgcc catcacctgc tgaaggagcc gcatttccgc
     1261 aagatgaaga agacagcgct gttcgtgaac accgggcgcg gctcgacagt cgacgaaacg
     1321 gcgatgatca aggcgctgca ggaaggctgg atcgccggcg ccgggctcga cgtgctcgag
     1381 accgagccgg tcggccacaa caatccgctg ctcggcatgg acaacgtcac gctcaccgcg
     1441 cacgtcgcct cggcgtcgac ccgcttcgac atcgcgcgca agcgccgggt cggcgcggag
     1501 ctgtcgctgg tgctctccgg caagtggccg cgcgcctgcg tcaatcccgc ggtgctggag
     1561 aagtccaagc tcgagcgctg gcagcccttc tcgatggagc gtggcccggg gaactgacgc
     1621 gctatggagt ggacatcctc atatcaggcc cctctccccc gctcggggga gaggacgggt
     1681 gagggggata cgcacgtcgt tacccccctc acctagcctc tccccctagt cgcgcctgtg
     1741 aaggcgctga ggggagagga actcgagtca tgcgccgctg agtttctaaa ccggcggctt
     1801 cttgtccacg acgctcatgc gccgcctctc gcggatcgcc cgctcgcaca gagcaaggct
     1861 gtcgaacgga ccgagcacga ccttgccgcc gtcgtcgacg gcataccagc cgggttcggt
     1921 tacgctgtag tcgccgacat catcggtatg gacgtcgacc gccatcagat ccgtgggctt
     1981 gcgcatttga ccacctttcc tccgctggta ggtagtcaac cgtccgcggt tttgtaagaa
     2041 tggctgttgg tggaaagtcg atacagccat gggcccaacc tgatgtcgag gcttctgctt
     2101 caatcgcttg caatcttggc gtgcctatat tccggatgcc tggttgccca ggatctgggt
     2161 ccgctgctgc cgcccggcca gtcgccgcaa agatcgcccg tcctggaacg atattccctg
     2221 gagggaggga ccccgggggc gcccggtcct gccaacttgt cagcagtgct cggccgcgtc
     2281 ggccaggccg agccggggct gcggcttcgc ggcgcgcggg atatcgagct ctatcgcacg
     2341 ctggcgccgg ccgtggccct catcctgacg gacaagagcg aaggatcggc ttcattgatc
     2401 gcctccaagc ccggcacgcc tgcgacttcg ggaacgctcc tgaccaacgc gcatgtcgtg
     2461 ggcgacgcca gcgaagtggc cgtcatcttc aagcccgcgc agggcggcgc caagatcaat
     2521 ccggccgacg ccgtcatcgg tcgcgtgcgc aaggtcgatc ccgtccgcga cctggcgctg
     2581 gtcgaagtgg caaacctgcc ggcaaacgtc acggtgatcg ctctcggcac catgaaagac
     2641 gtggctgtcg gcgcggacgt ccacgccatc ggccatccct cgggccagac ctggacctac
     2701 accaagggcc tcgtcagcca gatccgctct gagttccaat ggcagcccga tccgtcgggc
     2761 accaggcacc tggccgaagt catccagacg cagacgccga tcaacccggg caattccggc
     2821 gggccgctga tcgacgaaag cggccggctg atcggcgtca attccttcaa ggggaccggc
     2881 gagttgctga acttcgccgt gtcggtccgc gaggtcgaga agttcctgac ggcggcgcaa
     2941 ggtggcgctt tcgagcccaa gcttgccgcg gcgacgtcga agccttgcgc cgtcaaggtg
     3001 atgtacgagg gccgcaatca aaaagacgac gcgttcattc gcaacgtcga tctggactgc
     3061 agcggccggg cgaatgcgac cctctacgtc cccgatgaca aatccaagcc gattgtcttt
     3121 cgcatcgaca ccaaccatga cggcaaggtc gacgcggaga tctacgacgt ggatcgcgac
     3181 ggcaagtggg actattccct gtgggatacc gacttcgacg gcaagcccga tctgatcggc
     3241 taccatcccg acggcaagct gaagccgtcg cgctacgaga aatatcagcc gaagccgtga
     3301 ccaacccccc ttcccagctt cgctgctacg gagtggacac atctcgaatt cctctccccc
     3361 gctaggggaa gaggttagga gagggggcaa tgacgtgcgt aaccccctca cccaacctct
     3421 ccccctagcg ggggagagga gcccgattcg cgttgtgtcc gcgctctacc caggccggcg
     3481 ggtccagcgg tcgaggttga ccgcgccggg cggcaccttg ccctgcacca gcgcctcgac
     3541 ctggcgcacg gtgtcgaacg cctggctttc gctggccggc ggcgtcaggc cgccgatgtg
     3601 cggcgtggcg atcacgttgg gcagggccgc cagcgcgggc gacggcatct ggtcgggcgc
     3661 gcggccgaca tcgagggcgg cgccagcgat gcgcccctcg gtcaatgcgc tcgcgagggc
     3721 cgcctcgtcg acgagattgc cgcgcgacat gttgatgaag aaggcctcgg gcttcatgcg
     3781 cgcgaaggcg gccgcgtcca tcaggctctc ggtctcctcg ttggcgatgg cgaggcagac
     3841 gacgtaatcg gagcgcgcga gcaattcctc gaatggcagc ttgaccaagc gctggtcgtc
     3901 gacctgggca tagggatcag agaccagcac cttggcgccc agggcggcga gcagcggcgc
     3961 cagcgcgcgc gagatgcggc cgtagccgat gatgcccacc gtgctgccac cgagctgtcg
     4021 gccgaccttg atctcgggca gccggcctgc gtgatagtcc gccgcggcgc gcgagacgcc
     4081 gcgcgacagg tcgaccagga aacccagggt cagttcgacg accgactgca cgaagcccgc
     4141 ctcggcatga gtcaccagca cgccggccga agacgccgcc gcgacatcga tgttgcggat
     4201 atctatggcg ctgcgcatca ccaccttgag ccgggacaag ccggcgaaga tctcgcccgg
     4261 tacaggtgtg gcgcggtcgg caacgatcag atcgacctcg cgggcggcgg cgatcaggcc
     4321 ggcaggatcg agcggtgcgt cgccctcatg caggacgacc tcgaccagct actgcaggcg
     4381 tgcgagcgcc cgggcgccgt aatattgcgc gcgcgcccgc ggcacgtggc tgagcagcag
     4441 gcgcacggtg ctcgcctagc cctgggcctt ggcacggtcc ctgaggccgc gcagggcgag
     4501 cgcgtagcct tcgatgccga agccgctaat ggtgccgaga gagctcgtcg ccacttcgga
     4561 aacggcgccg cgccgagcgg gattggagat gtggacctcg atcgtcgggt acccgacgtt
     4621 gccgatggcg gcgaccaggg cgggatagcc gcgggtgtag ccggcgggat tgatgatggc
     4681 gccggcgatg ccttcatcgt gcgccgcgaa gagacggttg atgacctcgc cctcgatgtt
     4741 ggaatggaag atctcgacct ccacgccgag ctcctgggcg tagccgcgga tcttggcatc
     4801 gtactccggc agggtcatcg ggccgaagat ctcgacctgc gccttgccgc gcatggtcat
     4861 gccggcgccg tggatgatca ggattttcat gcgctccccg tctcctggtg gagcatgctc
     4921 cacgatctgc aattggcgcg gacataggtg ctggcggacg tcggctcccg gccataatgt
     4981 atgatcagtt ccaagcgcat cgcaacggtc acgtccgccc acaaccatgt cgactttgaa
     5041 ggccgcgtcc cgcgacaagc tcaaggccgt cagcaccgcc acggtggcga ccgccctgtt
     5101 caagcgcggc tttcgcaacc aggccattca gaacgtgcat ccgctgtcgc cggtccagcc
     5161 ggtgctggtc gggccggcct tcaccctgcg ctacatgccg gcgcgcgagg aactcaaccg
     5221 gctggaagtg ttccgcgacc gcggccatcc gcagcgcaag gcggtggagg attgcccgcc
     5281 cggcgccgtg ctggtgatgg acagccgcaa ggacgcgcgc gcggcttcgg ccggcgcgat
     5341 cctggtgacg cggctgatga agcgcggggt ggcgggcgtg gtgaccgacg gcggcttccg
     5401 cgactccgcc gagatcgtcc ggctgggctt tcccgcctat caccagcggc ccagcgcgcc
     5461 gaccaatctc accctgcacc aggcgatcga catcgacgtg ccgatcggct gtggcgacgc
     5521 cccggtcttc cccggcgaca cgatcctggg cgatggcgac ggcgtgatcg tcatcccggc
     5581 cagcctggtc gacgagatcg ccgaagaagc cttcgagatg accgcgttcg aggacttcgt
     5641 cggcgaacag gtgaacaagg gtcacggcat ctacggcctc tatccgccga ccagcgagca
     5701 gaccctggcc gacttcgcgg cctggcggaa aatgaagggg aggtaggtcg aacttctttc
     5761 tccttccccg tcacacgggg gagggcgggg aggggga
//
LOCUS       DASWGA010000486         6025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2084684, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000486 DASWGA010000000
VERSION     DASWGA010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6025
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2084684"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2562)
                     /locus_tag="VF991_11655"
     CDS             complement(<1..2562)
                     /locus_tag="VF991_11655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEX9557146.1"
                     /translation="MAIIGAAAFIPRKTTILPEGGRDFLHRRMMELVGVAVAAAGVVL
                     LLSLFTYSPGDPSLNHATGRAPHNIVGLPGAYISDLLLQTFGLAIVLVPVALITWGVR
                     LVRTHHLGFFGLRLSLLLLSLLMMSVACIGLGDVGGAATHAGPGGLVGLALVGRFREI
                     VLTHSSGGSLALIEPACAALAFIAMAPALGMNRTDLPLIFRILRAPFLWSLWLVRAGI
                     GLWRGKPQPLDEDADLPAPAIGYAEIPGEIDASQYDPARFEDRLEQIPEEGAPLPARD
                     SLMVDAPYAPIERPTDDIPEAPVPLQPQPPTAAESVQDRTLFDRLAGLRIEPILGRLR
                     PAAPAPTLQPPEASDGFEPASDSSAASAVDTADDNPFAPDALGTEPLAPSVAGGVTIV
                     PRKSVAQGKRAARAGQRELDLVTGEYRLPPLDILGLPSRISAEAKIDEEALEQNARLL
                     ETVLDDFGVKGQIVKVRPGPVVTLYELEPAPGTKSSRVIGLADDIARSMSAVSTRVAT
                     VPGRNVIGIELPNARRETVFLRELLSTRHYEDSRLGLPLALGKDIGGDPVIADLSRMP
                     HLLIGGTTGSGKSVAVNTMILSLLYRLPPDRCRFIMIDPKMLELSVYQDIPHLLTPVV
                     TEPRKAIVALKWVVREMEDRYRAMSALGVRNIAGYNERLVEAARKGQALSRKVQTGID
                     PETRRPLFEDEEIDLTPLPFIVVIIDEMADLMLVAGKEIEAAVQRLAQMARAAGIHVI
                     MATQRPSVDVITGTIKANFPTRISFQVTSKIDSRTILGEQGGEQLLGQGDMLYMAGGG
                     KIARVHGPFVSDTEVEDVVRHLRAQGVPSYLESVTDDPDGEEGGLGLPGEGEEGES"
     gene            complement(2580..3785)
                     /locus_tag="VF991_11660"
     CDS             complement(2580..3785)
                     /locus_tag="VF991_11660"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9557147.1"
                     /translation="MFNPRLTDALSDYPFARLNGLIADVTPPSHLPLINLSVGEPQGA
                     LPAFARKILADEVEGWSKYPPNQGIADLNLAIVEWLERRYRLPQGLLDPARHVIPTAG
                     SKEGVYVIATVATPQEKGGVKPVVSIPNPFYQAYLGGAVLSGAEPYFANAHAATGFLP
                     DVEQIDEAIWKRMAIFYLCSPANPQGAMASLAYLQKLIRLCRRHDTVLALDECYAEIY
                     TGQPPTGGLEAAFAMDETGGKDPFRNVVVFHSLSKRSNAAGIRSGFMAGDPRLVAMML
                     RWKTYGGTQIPFAVQKASAALWREETHPVETRAWYAKNFRVAEQILHNRFGYFTPGGG
                     FFLWLDVGDGEAATRRLWGEAHLKVLPGAYVCRETDGVNTADRYIRVALVHDEKTTRE
                     AMTRLATVL"
     gene            complement(3919..4257)
                     /locus_tag="VF991_11665"
     CDS             complement(3919..4257)
                     /locus_tag="VF991_11665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX9557148.1"
                     /translation="MKLVSAIIKPFKLDEVRDALTGVGVSGLTVSEVKGFGRQKGQTE
                     IYRGAEYLVSFLPKVKVEIVVDDGQVERAIEAIQKAAHTGKIGDGKIFVTPVEQALRI
                     RTGETGSNAL"
     gene            complement(4435..5625)
                     /locus_tag="VF991_11670"
     CDS             complement(4435..5625)
                     /locus_tag="VF991_11670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEX9557149.1"
                     /translation="MLTSTALVLMMTIPGLALFYGGMVRKKNVLATVMQSFAVACLIS
                     VLWLVVGYSLAFTTGSTIIGGLSRVFLRGLALDSVHEAAKTIPETVYMSFQLTFAIIT
                     PALVAGAFAERMKFSAMMWFMALWSLVVYAPIAHWVWGGGFLGDWGVLDFAGGTVVHI
                     NAGVAGLVCALVLGKRRGFGVENMAPHNLVYSVIGASLLWVGWFGFNAGSAGGANGNA
                     GMAMAVTQFATAAAALSWMFAEWVTRGKPSVLGVISGAIAGLVAITPASGFVNPMGGL
                     VIGIVAGLVCFWGSTSLKRAMGYDDSLDAFGVHGIGGFVGAILTGVFAIEAIGGEGKR
                     GLIDGNGGQVLTQLWGCLVCIAWCAIATFILLKIVDALIGLRVTNEEEIEGLDINLHG
                     ETVH"
     gene            complement(5789..>6025)
                     /locus_tag="VF991_11675"
     CDS             complement(5789..>6025)
                     /locus_tag="VF991_11675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX9557150.1"
                     /translation="GFGRQKGQTEIYRGAEYAVSFLPKVKIEVVIDDAMVEHAVEVIR
                     KAAGTGKIGDGKIFVTSIEQAIRIRTGESGIDAL"
BASE COUNT         1036 a         2006 c         2045 g          938 t
ORIGIN      
        1 gctctcgccc tcctccccct cgcccggcag cccgagcccg ccttcctcgc catcgggatc
       61 gtcggtcacc gattcgaggt aggacggcac gccctgggcc cgcaggtggc gcaccacgtc
      121 ctcgacctcg gtgtcgctga cgaacggccc gtgcacgcgc gcgatcttgc cgccgcccgc
      181 catgtagagc atgtcgccct ggcccagaag ctgctcgccg ccctgttcgc ccaggatggt
      241 gcggctgtcg atcttggacg tcacctggaa ggagattctg gtcgggaagt tggccttgat
      301 ggtgccggtg atgacatcga ccgacggccg ttgcgtcgcc atgatcacgt ggatgccggc
      361 ggcgcgcgcc atctgggcca gccgctggac ggcggcctcg atctccttgc cggcgaccag
      421 catcaggtcg gccatctcgt cgatgatcac gacgatgaag ggcagcggcg tgaggtcgat
      481 ctcctcgtcc tcgaacagcg gccggcgggt ttcgggatcg atgccggtct gcaccttgcg
      541 gctgagcgcc tggcccttgc gcgcggcctc gaccaggcgc tcgttgtagc ccgcgatatt
      601 gcgcacgccg agcgcgctca tggcgcggta gcgatcctcc atctcgcgca ccacccactt
      661 caacgccacg atcgccttgc gcggctcggt gacgacgggc gtgagcagat gcggaatgtc
      721 ctggtagacg ctgagctcca gcatcttggg atcgatcatg atgaatcggc agcgatccgg
      781 cggcaggcga tagagcagcg acaggatcat ggtgttgacc gccaccgact tgcctgagcc
      841 ggtggtaccg ccgatcagca gatgtggcat gcgggagagg tcggcgatca ccggatcgcc
      901 gccgatgtcc ttgccgagtg cgagcggcag gccgagtcgg ctgtcctcgt agtgccgggt
      961 cgataaaagc tcgcgcagga acaccgtctc gcgccgcgcg ttgggcagct cgatgccgat
     1021 gacgttgcgc cccggcacgg tggcgacgcg cgtcgagaca gcactcatcg agcgggcgat
     1081 gtcgtcggcg aggccgatga cccggctcga cttggtgccg ggggcgggct cgagctcgta
     1141 gagggtgacg accggaccgg gccgcacctt gacgatctgg cccttgacgc cgaaatcgtc
     1201 gagcacggtc tcgagcaggc gggcgttctg ctcgagcgcc tcctcgtcga tcttggcctc
     1261 ggcgcttatc cgcgacggca gccccaggat gtcgagcggc ggcaggcgat actcgcccgt
     1321 cacgaggtcg agctcgcgct ggcctgccct agcggcgcgc ttgccctggg caaccgactt
     1381 gcgcggcacg atcgtcaccc cgccggcgac ggatggcgcc agcggctcgg tgccgagcgc
     1441 atcgggcgca aacggattgt cgtcggcggt atcgacagcc gacgcggccg aagagtcgga
     1501 cgcaggttcg aatccgtcag acgcctcggg gggctgcagt gtgggcgccg gagcggcagg
     1561 ccgcagccgg cccaggatcg gttcgatgcg caggccggcc aggcggtcga acagggtgcg
     1621 atcctgcacc gattcggccg ccgtcggcgg ctgaggctgc agcggtacgg gcgcttcggg
     1681 gatgtcgtcg gtcggacgct cgatcggcgc gtagggcgca tcgaccatca gggagtcgcg
     1741 cgccggcagc ggcgctccct cctccgggat ctgctcgaga cggtcctcga aacgtgccgg
     1801 gtcgtactgg ctggcatcga tctcacccgg gatctcggca tagccgatcg ccggcgccgg
     1861 caggtcggcg tcctcgtcga gcggctgcgg cttgccgcgc cacaggccga tccccgcccg
     1921 caccagccac aggctccaca ggaagggcgc gcgcaggatg cggaagatca gcggcaggtc
     1981 ggtgcggttc atgccgagcg ccggcgccat ggcgatgaaa gcgagtgccg cgcaggcggg
     2041 ctcgatcagc gccaggctgc cgccgctcga atgggtgagc acgatctcgc ggaagcggcc
     2101 gaccagggcg aggccgacca gcccgcccgg tccggcgtgg gtcgccgccc cgccgacgtc
     2161 gcccaggccg atgcaggcca cgctcatcat cagcagcgac agcagcagca acgagagtcg
     2221 cagcccgaag aaaccgagat ggtgggtgcg caccaggcgc acgccccagg tgatcagcgc
     2281 caccggcacc agcacgatgg caagcccgaa ggtctgcagc agcaggtcgg aaatgtaggc
     2341 gccgggcaag ccgacgatat tgtgcggcgc gcgaccggtc gcatgattga gcgagggatc
     2401 gccagggctg taggtgaaca gcgacagcag cagcacgaca cccgccgccg cgaccgccac
     2461 gccgacaagc tccatcatgc gccggtgcag gaagtcgcgc ccgccctccg gcaagatggt
     2521 cgtcttgcgc gggatgaagg cggcggcgcc gatgatggcc atggttgggg ccgcgctctc
     2581 tagagcaccg tggcgaggcg ggtcatcgcc tcgcgggtgg ttttctcgtc atgcaccaga
     2641 gcgacgcgga tgtagcggtc ggccgtgttg acgccatcgg tctcgcgaca gacataggca
     2701 ccgggcagca ccttcagatg cgcctcgccc cacagccgac gggtggcggc ctcgccgtca
     2761 ccgacatcga gccacaggaa gaagccgccg cccggcgtga aatagccgaa gcggttgtgc
     2821 aggatctgtt cggcgacgcg gaaattcttg gcgtaccagg cgcgcgtctc gacgggatgc
     2881 gtctcctcgc gccacagcgc cgccgaggcc ttctggacgg caaacgggat ctgcgtgccg
     2941 ccataggtct tccagcgcag catcatcgcc accagcctgg gatcgccggc catgaagccg
     3001 gagcggatgc cggcggcgtt cgagcgcttg ctgagcgagt ggaagaccac gacgttgcgg
     3061 aagggatcct tgccgcctgt ctcgtccatg gcgaaggccg cttccaggcc gccggtcggc
     3121 ggctggccgg tatagatctc ggcatagcac tcgtcgagcg ccagcaccgt gtcgtgccgg
     3181 cggcacagcc ggatcagctt ctgcagatac gccaggctcg ccatggcgcc ctgcggattg
     3241 gcgggcgagc aaagatagaa gatcgccatc cgcttccaga tcgcctcgtc gatttgctcg
     3301 acgtccggca ggaagcctgt ggcggcatgg gcattggcga agtagggctc ggcccccgac
     3361 aggaccgcgc cgccgagata ggcctggtag aacgggttgg ggatcgacac gaccggcttg
     3421 acgccgccct tctcctgcgg cgtggcgacg gtggcgatca catagacgcc ttccttgctg
     3481 ccggccgtcg ggatcacgtg ccgggccgga tcgagcaggc cttggggcag gcggtagcgg
     3541 cgctcgagcc actcgacgat ggcgaggttg aggtcggcaa tgccctggtt gggcgggtac
     3601 ttgctccagc cctcgacctc gtcggccagg atcttgcggg cgaaggcggg cagcgcaccc
     3661 tgcggttcgc cgaccgagag gttgatcagg ggaagatgcg acggcggcgt cacatcggcg
     3721 atcaggccgt tcaatcgcgc aaacgggtag tccgacagag cgtccgtcag gcgcggattg
     3781 aacatcgaaa ccatccatga gcctcgccag accgaggcaa agcaatgagg ccggcacgag
     3841 ggggcccggc cgagccgact attggcctat tgtatgaaac aaattagcca ataacaacaa
     3901 tggaatagcc cgttttcttc agagtgcgtt ggatcccgtt tcaccggtcc ggatgcgcag
     3961 cgcctgttcg accggggtga cgaagatctt gccgtcgccg atcttgccgg tgtgggcggc
     4021 cttctggatg gcttcgatgg cacgctcgac ctggccgtca tcgaccacga tctcgacctt
     4081 caccttgggc aggaagctca ccagatactc ggcgccgcga tagatctcgg tctgaccctt
     4141 ctgccggccg aagcccttca cctcgctcac cgtcaggccc gatacgccga ccccggtcaa
     4201 ggcgtcgcgc acctcgtcga gcttgaacgg cttgatgatg gccgacacga gtttcatgcg
     4261 ctcctcccgc ctttcggctt gcaacgctag actggcgtct gccgtcggcg acgtcaaatt
     4321 cgcgaaaaaa atggcccggc gaaaggctcg ccgggccgca agtggccgcc gcgacgcgaa
     4381 gcggcggctg agagggaacc agggaggagt cgggttcccg aacgcgatgg acgatcagtg
     4441 caccgtttct ccgtgcagat tgatgtcgag gccttcgatc tcctcttcgt tggtcacgcg
     4501 caggccgatc agcgcgtcga cgatcttgag gaggataaag gtggcgatgg cgcaccaggc
     4561 gatgcagacc aggcagcccc acagctgggt caaaacctgg ccgccattgc cgtcgatcag
     4621 gccgcgcttg ccctcgccgc cgatcgcctc gatggcgaac acgccggtca ggatggcgcc
     4681 gacaaaaccg ccgatgccgt gcacgccgaa ggcgtcgagc gaatcgtcat agcccatggc
     4741 ccgcttgagg ctggtggaac cccagaagca gaccaggccg gcgacgatgc caatcaccag
     4801 cccgcccatc ggattgacga agccggacgc cggcgtgatg gcgaccaggc cggcgatcgc
     4861 gccggagatg acacccagca ccgacggctt gccgcgcgtc acccactcgg cgaacatcca
     4921 cgacagcgcc gctgccgccg tcgcgaactg ggtgacggcc atcgccatgc cggcattgcc
     4981 attggcgccg ccggccgaac cggcattgaa gccgaaccag ccgacccaca gcaacgaggc
     5041 gccgatcacc gaatagacca ggttgtgcgg cgccatgttc tcgacgccga agccgcggcg
     5101 cttgccgagg accagggcac agaccaggcc ggcaacgccg gcattgatgt gcaccacggt
     5161 gccgccggcg aagtcgagca cgccccagtc gcccaaaaag ccgccgcccc acacccaatg
     5221 ggcgatcggc gcgtagacca ccagcgacca cagcgccatg aaccacatca tggccgagaa
     5281 cttcatgcgc tcggcgaagg cgccggcgac cagcgccggc gtgatgatgg cgaaggtgag
     5341 ctggaagctc atatagaccg tttcgggaat ggtcttggcc gcctcatgga cgctgtcgag
     5401 ggccagtcca cgcaggaaga cgcggctgag cccgccgatg atcgtgctgc ccgtggtgaa
     5461 ggcgaggcta tagcccacga ccagccacag caccgaaatc aggcaggcga cggcgaagct
     5521 ttgcatcacg gtggccagca cgttcttctt gcgcaccatg ccgccgtaga acagcgccag
     5581 gccggggatg gtcatcatca gcaccaatgc cgtcgatgtc agcatccagg cggtgtcgcc
     5641 ggtatcgagc ttgggcttgt cgtcggcggc cagggcgagg gccggcagaa gcagcgccgc
     5701 agcccctgcc agaccgccaa acgccgaatt gaacctgagt ttcatcgttc tcccctcgcg
     5761 tctcgagttg ctttcatggt ttcccggact acagcgcgtc gatgccggat tcgccagtgc
     5821 ggatgcgaat cgcctgctcg atggatgtga cgaagatctt gccgtcgccg atcttgccgg
     5881 tgcccgctgc cttgcggatc acctcgacgg cgtgttcgac catggcgtcg tcgatcacga
     5941 cctcgatctt gaccttgggc aggaagctca ccgcgtactc cgcaccgcga tagatctcgg
     6001 tctggccctt ctgccggccg aagcc
//
LOCUS       DASWGA010000487         2414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1957188, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000487 DASWGA010000000
VERSION     DASWGA010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1957188"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..773)
                     /locus_tag="VF991_11680"
     CDS             complement(18..773)
                     /locus_tag="VF991_11680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557151.1"
                     /translation="MNAHHMCGLLAALFLAPGPAFAQSMTAPAAPNAITAPAQKTIGT
                     PSARKGSAALIVINARGAKLAGQKLTLEGVSPSAILFATRPARSVGHMVTPEMVALWT
                     TGSFAKDPPNATVSVFQKDGSSVSDIVAVLTAPKLDGDKLTFDVAVLEGNLGTADGPA
                     SIFIDTLWWGIGSNGATYYGQNQTTGGITPNIEDPHGTSTFTGWSNPSPTEPYVRPQT
                     GGVGGPPPPDVDPRYQQRYNQPTCGKPPLLPCY"
     gene            946..1164
                     /gene="infA"
                     /locus_tag="VF991_11685"
     CDS             946..1164
                     /gene="infA"
                     /locus_tag="VF991_11685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002517801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEX9557152.1"
                     /translation="MAKEDLIEFTGVVAELLPNAMFRVKLDNDHTILAHTSGKMRKNR
                     IRVLAGDRVTVEMTPYDLSKGRITFRFK"
     gene            1168..1746
                     /locus_tag="VF991_11690"
     CDS             1168..1746
                     /locus_tag="VF991_11690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HEX9557153.1"
                     /translation="MAASIPPLVLASASPRRLELLRQVGLEPAEIDPADIDESPGTGE
                     LPRTYAVRMARAKLAAVACRHPGAIVLAADSVVVCGRRILPKAETEAEARACLVLLSG
                     RRHRVLGGLAVGRPDGTVRTRLVETVVRFKRLEAAEIDDYLQSGEWRGKAGGYAIQGR
                     AARFVAFISGSHSNVVGLPLFEAASLLKAAAP"
     gene            1743..>2414
                     /locus_tag="VF991_11695"
     CDS             1743..>2414
                     /locus_tag="VF991_11695"
                     /inference="COORDINATES: protein motif:HMM:NF021653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HEX9557154.1"
                     /translation="MSRVDRLICHVMPKAFLMALVAEGRLVELQIVRRDTPSRVESVF
                     LGRLERVMPDLDAAFVDIGIGRSGFLRAEDRAGVDDWPPPGAPILVQVRNDGEGEKGP
                     RLSMNIAVTGRYVVYHPVGSGVSFSRRIEGESERDRLRAHVEGLLEGGVVLRTAAAGA
                     TLDVLRADALQVMERWEKIRSQAFDVQPPADLSARIPGERDPIARLLRDHGASLEEVI
                     LDERGM"
BASE COUNT          337 a          819 c          856 g          402 t
ORIGIN      
        1 cgcgttcatg aagggcctca atagcaaggc agcaggggag gcttgccgca ggtcggctgg
       61 ttgtagcgct gctggtagcg cggatcgaca tcgggcggcg gcgggccgcc gacgccgccg
      121 gtttgcggcc ggacgtaggg ttcggtcggc gaggggttgg accatccggt gaaggtgctg
      181 gtgccgtgcg gatcttcgat attgggcgtg atgccgccgg tcgtctggtt ctggccatag
      241 taggtggcgc cgttggagcc gatgccccac cacagcgtat cgatgaagat cgaggccggt
      301 ccgtcggcgg tgcccaggtt gccctccagg acggccacgt cgaaggtgag cttgtcgccg
      361 tcgagcttgg gcgccgtcag cacggccacg atgtccgata cgctcgagcc gtccttctgg
      421 aacaccgaga cggtggcgtt gggcgggtcc ttggcgaacg agccggtggt ccacagggcc
      481 accatctccg gcgtcaccat gtgaccgacg ctgcgcgccg gtcgggtggc gaacaggatg
      541 gcgctgggcg acacgccctc gagcgtgagc ttctggccgg cgagcttggc gccgcgcgcg
      601 ttgatcacga tcagggcggc cgagcccttg cgcgccgacg gggtgccgat cgtcttctgg
      661 gccggcgcgg tgatggcgtt gggtgccgcc ggcgcggtca tcgactgggc aaaggctggg
      721 cccggcgcca ggaacagggc ggccagaagg ccgcacatgt ggtgtgcgtt cattgtgact
      781 ggtccttcct tccccgggcg tccgcagccg cgccttgtat aggggaggcc cgcgcccgtg
      841 agaagggcat tggtcttcaa ccaatccccc ggtccagttg actaaacccc tcgtgcagcc
      901 cattttccgg ccgcttcgtc atatttcacg ccaaccggag gctggatggc caaagaagat
      961 ctgattgaat tcaccggcgt ggtggcggaa ttgctgccca atgccatgtt ccgggtgaag
     1021 ctcgacaacg accacacgat cctcgcccat acctcgggca agatgcgcaa gaaccgcatc
     1081 cgcgtgctgg cgggcgaccg cgtcaccgtc gaaatgacgc cgtacgacct gtccaagggc
     1141 cgcatcacct tccgcttcaa gtaggcgttg gccgcgtcga tcccgccgct ggtgctcgct
     1201 tccgcctcgc cgcgccggct cgagctgctt cggcaggtcg gactcgagcc tgccgagatc
     1261 gatcctgccg acatcgacga aagccccggc acgggcgaac tgccgcgcac ctacgccgtg
     1321 cgcatggccc gggccaagct cgccgccgtc gcctgccgcc atcccggcgc catcgtgctg
     1381 gcggccgaca gcgtcgtggt gtgcggccgg cgcatcctgc ccaaggccga aaccgaggcc
     1441 gaggcgcgcg cctgcctcgt gctgctgtcc ggccggcggc accgcgtgct gggcggcctc
     1501 gccgtgggcc ggccggacgg cacggtgcgc acgcgcctgg tcgagacggt ggtgcgcttc
     1561 aagcggctcg aggcggccga gatcgacgac tatctccaaa gcggcgaatg gcgcggcaag
     1621 gccggcggtt atgccatcca gggccgcgcc gcgcgcttcg tcgctttcat ttccggctcc
     1681 cacagcaatg tcgtcggcct gcccttgttc gaggccgcga gtctattgaa agcggccgcg
     1741 ccgtgagccg cgtcgaccgg ctgatctgcc atgtcatgcc caaggcgttc ctgatggccc
     1801 tggtcgccga gggccgcctg gtcgagctgc agatcgtgcg ccgcgacacg ccttcgcggg
     1861 tcgagagcgt cttcctcggc cggctcgaac gggtgatgcc cgatctcgat gccgccttcg
     1921 tcgatatcgg catcggccgc tcgggctttt tgcgcgccga ggatcgcgcc ggcgtcgacg
     1981 actggccgcc gcccggcgcg ccgatcctgg tccaggtgcg caacgacggc gagggcgaga
     2041 aggggccgcg gctgtcgatg aacatcgccg tcaccggccg ttacgtcgtt taccatccgg
     2101 tcggctcggg ggtcagcttc tcgcgccgca tcgagggcga gtccgagcgc gatcgcctgc
     2161 gcgcccacgt cgagggattg ctggaaggcg gcgtcgtgct gcgcaccgcc gcggccggcg
     2221 ccacgctcga cgtgctgcgt gccgacgcgc tccaggtcat ggagcgctgg gagaagatcc
     2281 gcagccaggc cttcgacgtc cagccgccgg ccgatctctc ggcgcgcatc cccggcgagc
     2341 gcgatccgat cgcccgcttg ctgcgcgacc acggcgcgtc gctcgaagag gtgatcctcg
     2401 acgaacgcgg catg
//
LOCUS       DASWGA010000488         1759 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2085273, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000488 DASWGA010000000
VERSION     DASWGA010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2085273"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VF991_11700"
     CDS             <1..255
                     /locus_tag="VF991_11700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557155.1"
                     /translation="GLLALEAALAKDSALLSEAEGAALDGARFRLEAAIAGDDRDEIN
                     AAAEALEELSKPFAERRMDRGIRDALSGLSVKELESRVGE"
     gene            270..605
                     /locus_tag="VF991_11705"
     CDS             270..605
                     /locus_tag="VF991_11705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family 2Fe-2S iron-sulfur cluster
                     binding protein"
                     /protein_id="HEX9557156.1"
                     /translation="MPKMTFILKDGSRKEVEAPLGLSVLEIAHRNHVDVEGACEGSLA
                     CSTCHVVVEKDWFDKLAPASEDEEDMLDLAFGLTHTSRLGCQIRMSEALDGLVVKLPP
                     ATRNMMVDK"
     gene            616..822
                     /gene="iscX"
                     /locus_tag="VF991_11710"
     CDS             616..822
                     /gene="iscX"
                     /locus_tag="VF991_11710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020292197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HEX9557157.1"
                     /translation="MARKLGWTDIHDIAIELEERHPDVDNVNLRFTDLHRWVMELPGF
                     EDDPNRSNEKILEAIQAAWIEERD"
     gene            880..1542
                     /locus_tag="VF991_11715"
     CDS             880..1542
                     /locus_tag="VF991_11715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557158.1"
                     /translation="MRGNWICLLALPLLLAAGLGACASNGVPPGIVYTSGVPSGSGPG
                     PSGSGPYGNSSYGNSSYGNASYGGPAAPAPSQGSNYGAPVAGDSGRVVSIREVALQGA
                     GGGGGGGNGPLVGGLLGAGAGATIGAVTSRSLGGGIVGAMIGLVGGAIAGTIASGNYG
                     SGGGYGGRGIEVTVQRDDGQQMTVAQRDDGDIQLGDRVQVVQNRQGVAQVVRDTSRSR
                     DQ"
BASE COUNT          305 a          538 c          629 g          287 t
ORIGIN      
        1 ggattgttgg ccctggaggc ggcattggcc aaggacagcg cgttgctgtc ggaggcggag
       61 ggtgccgctc ttgacggcgc ccgcttccgg ctggaggcgg cgatcgccgg ggacgatcgt
      121 gatgagatca atgccgcggc cgaggcgctg gaagagctca gcaagccgtt cgccgagcgg
      181 cgcatggacc gcggcatccg cgacgccttg tcgggattgt cggtcaagga actggaaagc
      241 cgggtgggcg agtgatgagg gcgttctgaa tgccgaagat gacgttcatt ctcaaggatg
      301 ggtcgcgcaa ggaagtagag gcgccgcttg gcctcagcgt gctcgagatc gcccatcgca
      361 accacgtcga cgttgaaggc gcctgcgaag gctcgctcgc ctgctcgacc tgtcatgtgg
      421 tcgtcgaaaa ggactggttc gacaagctgg cgccggccag cgaggacgag gaggacatgc
      481 tcgatctcgc cttcgggctc acccatacct cgcggctggg ctgccagatc cgcatgagcg
      541 aggcgctcga cgggctggtg gtcaagctgc cgccggccac ccgcaacatg atggtcgaca
      601 agtagggaga cggcgatggc gcgcaagctc ggctggaccg acattcacga tatcgcgata
      661 gaactcgagg agcgccatcc cgacgtcgac aacgtcaatc tccggttcac cgacttgcac
      721 cgctgggtga tggaattgcc cggtttcgag gacgatccca accggtccaa cgaaaagatc
      781 ctggaggcca ttcaggccgc ctggatcgaa gagcgcgact agccgaatgc cccaatttgg
      841 tcctaaatgc tctcgtacag tgatacctgg gagggtgtca tgaggggcaa ctggatctgt
      901 ctattggcgc tgccacttct gctggcggcg ggccttggtg cgtgcgcctc gaacggcgtt
      961 ccgcccggta tcgtctacac ctcgggcgtg ccttccggca gcggacccgg gccttcgggc
     1021 agcggtccgt atggcaatag ctcgtacgga aacagctcct atggaaacgc ctcctacggt
     1081 ggcccggccg cccctgcgcc gtcccagggc agcaattacg gcgcgccggt cgcaggcgac
     1141 agcggccgtg tggtgtcgat ccgtgaagtg gccctccagg gggcgggcgg cggcggcggt
     1201 ggcggcaacg gccccctggt cggcgggctg ctgggcgcgg gcgccggcgc cacgatcggc
     1261 gcggtcacca gccgcagcct gggcggcggc atcgtcggtg ccatgatcgg attggttggt
     1321 ggcgccattg ccggcaccat cgccagcggc aattacggct ccggaggcgg ctatggcgga
     1381 cgcggcatcg aagtcacggt gcaacgcgac gacggtcaac agatgaccgt ggcgcagcgc
     1441 gacgacggcg acatccaatt gggcgacagg gtccaggtcg tgcagaaccg ccaaggcgtc
     1501 gcacaggtcg tgcgcgatac ctcgcgcagc cgggaccaat aaggtacatt tcagggatcg
     1561 aggccagaaa aggaactgcg atgttcggca agtggttgct cggccttctg ttgccgctgg
     1621 ccctggcagg cggtctggcc gcctgcgaga accccaacac ggtccagccc ggcgtcgtca
     1681 acacgtcggc ttcgggcggc tatcgcggcg agacagggcg cgtggtgtcg atccgcgaag
     1741 tgcccgtccg cggccggag
//
LOCUS       DASWGA010000489         1840 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1822694, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000489 DASWGA010000000
VERSION     DASWGA010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1840
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1822694"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..>1840
                     /locus_tag="VF991_11720"
     CDS             163..>1840
                     /locus_tag="VF991_11720"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9557159.1"
                     /translation="MMTEREKRDFEAGLSEEVSAWLRGDTSRRSFLTRMMLMGGTAML
                     PGLGYTASGSRAWAAAVDMSKVDLADPSTPLGTAQAAAVKASIEGPKEGSAFRAVEAA
                     QKLKGNDISLTLTYETGLQALEPKNFSGPMWHGLTGMNVNVVELPHPDQYSKPIVEHI
                     ANSGAYDVLDIEPAWIPGLANGGAIVPIDAYVEKYMNKADLDDYHPLYKNITLYKGKR
                     WGFFDDGDMFCLYYRTDIFGDAKLQDAYQKKFNKKLEVPKTWDDYSQVAQFITDQLAP
                     NVYGSAHFRKAGSPGNQFSFLQQFRANGGKFFDADMKAQLATPAGVTTLKQMIAQNNA
                     SLPGNNDLDAVAQWTAWLQGKVAMIYSWPPTGRISSNYAQRDKAINFIPKSDIADKVG
                     YAVMPGGNGEMASGYVRALAAGSKNEEAAYLFMQWVTAPPLSLVRTMLPYTLRDPYRM
                     STYKSEQYRALWPAAKDYLSNLAEAANGGVVDMIMPGWQDYALTIDRMCTAVWGGQDP
                     EAALKKANDEWDVTTKRLGVNAQKAAYEQFLKIPGSYADHTIDKLGLSVHV"
BASE COUNT          383 a          593 c          582 g          282 t
ORIGIN      
        1 ccgatcgtcc ggcgactgga attgcttgcg gccgagctgg catccgcggc gcggcgaccc
       61 gcgtcagagc gcacctgagg gaggatgtcg gagttcagat caatctagcg caagaaccgg
      121 cccggatgag cgggaccggc aaagcaagga ggaggaagcg acatgatgac ggaacgcgaa
      181 aagcgggact tcgaggccgg cctgtccgag gaggtgagcg cgtggctgcg tggcgacacc
      241 tcgcgccgca gcttcctgac acgaatgatg ctgatgggcg gcaccgcgat gttgcccggc
      301 ctcggctaca cggcgtccgg cagccgtgcg tgggccgccg cggtcgacat gtcgaaggtc
      361 gatctggccg atccgagcac accgctggga acggcgcagg ctgcagcggt caaagcctcg
      421 atcgaaggtc ccaaggaagg gtcggcgttc cgcgccgtag aagcggccca gaagctgaag
      481 ggcaatgaca tctccctcac cctgacctat gagaccggcc tgcaggcgct cgagcccaag
      541 aacttctccg ggcccatgtg gcacggcctc accggcatga acgtcaacgt cgtcgagctg
      601 ccccatcccg accaatactc gaagccgatc gtcgagcaca tcgccaactc gggcgcctac
      661 gacgtcctcg acatcgagcc cgcctggatt ccgggcctgg cgaatggcgg tgcgatcgtg
      721 ccgatcgacg cctacgtcga gaagtacatg aacaaggccg atctcgacga ctatcacccg
      781 ctttacaaga acatcacctt gtacaagggc aagcggtggg gcttcttcga cgacggcgac
      841 atgttctgcc tctactatcg caccgacatc ttcggcgatg cgaagctgca ggacgcctat
      901 cagaagaagt tcaacaagaa gctcgaggtg ccgaagacct gggacgacta tagccaagtc
      961 gcccaattca tcaccgacca gctggcaccc aacgtctatg gctcggcgca tttccgcaag
     1021 gcgggcagcc cgggcaatca attctccttc ctgcagcagt tccgcgccaa tggcggcaag
     1081 ttcttcgatg ccgacatgaa ggcgcagctc gcgacgccgg ccggcgtcac cacgctgaag
     1141 cagatgatcg cgcagaacaa cgcttcgctg cccggcaaca acgatctaga tgcggtggcg
     1201 cagtggacgg catggctgca aggcaaggtc gccatgatct actcctggcc gccgacggga
     1261 cggatctcct cgaactacgc gcaacgggac aaggcgatca acttcatccc gaaatccgac
     1321 atcgccgaca aggtcggcta tgcggtgatg ccgggcggca acggcgagat ggcatcgggc
     1381 tacgtccggg cgctcgccgc cggctcgaag aacgaggagg cggcctacct cttcatgcag
     1441 tgggtgacag cgccgccgct gtcgctggtg cgcaccatgc tgccctacac gctgcgcgat
     1501 ccctaccgca tgtcgaccta caagtcggag cagtatcgcg cgctgtggcc cgccgccaag
     1561 gattacctca gcaacctggc cgaggcggcc aatggcggcg tcgtcgacat gatcatgccg
     1621 ggctggcagg actacgcgct cacgattgat cgcatgtgca ccgccgtctg gggtggccag
     1681 gatcccgagg ccgcgctcaa gaaggcgaac gacgagtggg atgtgaccac caagcgcctc
     1741 ggcgtcaacg cgcaaaaggc ggcgtatgag cagttcctca agataccggg ctcgtacgcc
     1801 gaccacacga tcgacaagct gggcctgtcc gtccacgtga
//
LOCUS       DASWGA010000490         4064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1444131, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000490 DASWGA010000000
VERSION     DASWGA010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4064
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1444131"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            208..465
                     /locus_tag="VF991_11725"
     CDS             208..465
                     /locus_tag="VF991_11725"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9557160.1"
                     /translation="MLAERSPINKVENIKKPMLIFHGANDVRCKVAKSDTIVAAMRTQ
                     QHRVATSESDPKRTCYWVAGACRLETFHLLGSGSPHAGATR"
     gene            462..842
                     /locus_tag="VF991_11730"
     CDS             462..842
                     /locus_tag="VF991_11730"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEX9557161.1"
                     /translation="MKIPYITIVAVLVGAALGAMGSQALKAQVPPTAFVVGEIDVENA
                     PAYFKEYVPVAAKAVVDGGGKYVVRNGKSVSLYGEPPKALAIMQFESLAKAQAVFGSK
                     AYTDAKAIGDKYAKFRIYAVEGLQ"
     gene            complement(972..1370)
                     /locus_tag="VF991_11735"
     CDS             complement(972..1370)
                     /locus_tag="VF991_11735"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX9557162.1"
                     /translation="MDETGDNSSVLLVARCMIAGVFLWSGIGRISGYDETGILMDERG
                     LVSQLVPVAVAVEIAGALLLIVGFKLRYTALGLASFSVVTALLFHANFIDHGQMFHFL
                     KNFAIVGGLLALYVSGPGRLSFDGMNDGPE"
     gene            1482..3032
                     /locus_tag="VF991_11740"
     CDS             1482..3032
                     /locus_tag="VF991_11740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX9557163.1"
                     /translation="MTWQPEMDELRRRQALTRRMGGADKVKRQHDGGRLTVRERIDRL
                     VDPGSFREVGSIAGKAAYDGRNDLVDLMPANAVMGRAKIEGRHVAVTGDDFTVRGGSA
                     DATIKEKDIFVERYANQYRVPLIRMIEGSGGGGSVKTIETTGRANVPGVRGWEWVVQN
                     MGTVPTVGLGLGSVAGLGAARLAATHYSVMVKEISAMFVAGPPVVNRLSAKQFDKQEL
                     GGWEIQLRAGAIDEAADSEDDAFALTRRFLSYLPSSVYEAPPRGPQTDDPARREESLF
                     DAIPRDSRKVYRIRPIVEKIVDEGSFFEMGRLYGRPVVTAFARIDGWPVAVMASDPMF
                     YGGGWTADACQKVARFVDLAETFHLPVVYFCDCPGFLIGLEAEKSGVIRQGVRAMSAM
                     FQTTVPWCSFIIRNAFGVAGAAHQNGARLNWRYAWPSGRWGSLPLEGGIEAAYRADIE
                     AADDPKARMAEIEERLNKLRSPFRSAETFWIEEIVDPRDSRRILCEFVELAAPVRGNG
                     PSRHWMRP"
     gene            complement(3029..>4064)
                     /locus_tag="VF991_11745"
     CDS             complement(3029..>4064)
                     /locus_tag="VF991_11745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557164.1"
                     /translation="VLLGIVIAVVATVYLSTSFFIVGEYNTAFAAVTAGMAGTLTERG
                     RRLGDAAFLCVLGVLCVRSYEAMTYLGPLLAAAIVWSMRTSTDGMARLPAAIAALAFL
                     AASVVSAATIAEYWSHPHFVKVRSMSFDFWQNLQFAIPLIGLAICAAIGLVRPSWLQG
                     RGPLVIIGIAATALAFTPWYRLLDQDSILYPPAHYLARQAAGLLLALLLVCMWLHVGW
                     QRGPPAALVTLRLPAVARRLVAAMTVLTIAAALPDAALTRLWSDYLERLRALVDSREG
                     IIRARDLPLLDWPDKLFAQDWSLPAMSAIVSRKPGRAFVRVDNDYLSNPPFDPACGTL
                     PRLKGYGWGR"
BASE COUNT          747 a         1336 c         1370 g          611 t
ORIGIN      
        1 ccccgtcacg gtcgaggagg ccgagcagtt gcggcgcgac caggaggcgc gcgtccagcg
       61 cgcgctggcc ggcttcacgg ccgcgcggcc gcccggcggc atcgacctgg tgcggctcta
      121 cgaggagaac ctgatcgacg gcatcgtcta cgagcgggac tccgcgtcgc ggtagacggt
      181 cgtcttaaaa ccctcgtcgg ccgcaggttg ctcgccgagc gctctcccat caacaaggta
      241 gagaacatca aaaaacccat gctgatcttt cacggcgcca acgatgtgcg gtgcaaggtg
      301 gccaaaagcg acaccattgt cgctgcgatg cggactcaac aacaccgcgt cgcgacttcc
      361 gagtctgacc caaagcggac atgctattgg gtggccggag catgccggct cgaaaccttc
      421 catctgctgg gttccggatc accgcacgca ggagcgacaa gatgaaaatt ccctacatca
      481 ccattgtagc tgttctcgtc ggcgccgcgc tgggcgcgat gggaagtcag gctctcaagg
      541 cccaggtccc accgaccgcc tttgtcgtgg gggagatcga tgtcgagaac gcgccagcct
      601 acttcaagga gtacgttccg gtcgccgcca aggcggtcgt ggacggtggc ggcaagtacg
      661 tcgtgcgcaa cggcaagagc gtgtccctct atggcgagcc acccaaagca ctggccatca
      721 tgcagttcga gagcctggcg aaagcgcagg ccgtgttcgg ctccaaggcc tacaccgatg
      781 ccaaggcgat cggcgacaaa tatgcgaagt ttcggatcta tgcggtggag ggactgcagt
      841 aggccaccct tcaggggtac gccgcgacat ggccaacgac gcggcctatg agctagagcg
      901 gtgcggcagt cttctcatcg acctgacgcg cggcaagccg cactcggcaa gctcgactta
      961 tggtacacgc cctattctgg accgtcgttc atgccgtcga acgacaggcg gccggggccc
     1021 gagacgtaaa gcgcgaggag cccgccgacg atcgcgaagt tcttcaggaa gtggaacatc
     1081 tggccgtggt cgatgaaatt ggcatggaac agcaacgccg tcacgaccga gaagctggcc
     1141 agtccgagcg ccgtgtagcg cagcttgaag ccgacaatca gcagcagcgc tccggcgatt
     1201 tcgacggcga ccgccaccgg cacgagctga ctgaccaacc cgcgctcgtc catcaggatc
     1261 ccggtttcgt cgtagccgct gatcctgccg atgcccgacc acaggaacac gcctgcgatc
     1321 atgcagcgcg ccaccagcag cacactactg ttgtctcccg tttcgtccat cggccgagct
     1381 ctcccctttg gctgctttca gtgtagccgg tccgggcctg cgttggtacg agacggggtc
     1441 gatctgagac gattgaaaca acccgaccgg ggaacaaagc gatgacttgg caaccggaga
     1501 tggacgagct gcgccgccgt caggcgctga cccggcgcat gggcggcgca gacaaggtga
     1561 agcgccagca tgacggcggc cgcctcacgg tgcgcgagcg catcgaccgg ctggtcgatc
     1621 cgggttcgtt ccgcgaggtc ggcagcatcg ccggcaaggc cgcctatgac ggccgcaacg
     1681 acctggtcga cctgatgccg gccaacgccg tgatgggccg cgccaagatc gagggccggc
     1741 atgtcgccgt gaccggcgac gacttcaccg tgcgcggcgg ctcggccgac gccaccatca
     1801 aggaaaagga catcttcgtc gagcgctacg ccaaccagta tcgcgtgccg ctgatccgca
     1861 tgatcgaggg ctcgggcggc ggcggctcgg tcaagaccat cgagacgacc ggccgcgcca
     1921 acgtgccggg ggtgcgcggc tgggaatggg tggtgcagaa catgggcacg gtgccgaccg
     1981 tggggctggg tctgggctcg gtcgccgggc tgggcgcggc gcggcttgcc gccacacatt
     2041 attcggtgat ggtgaaggag atctcggcga tgttcgtggc cggtcccccg gtggtgaacc
     2101 ggttgagcgc caagcagttc gacaagcagg agctgggcgg ctgggaaatc cagttgcgcg
     2161 ccggcgccat cgacgaggcg gccgacagcg aggacgacgc ctttgccctg acccgccgct
     2221 tcctctccta cctgccgtcg tcggtctacg aggcgccgcc gcgcgggccg cagaccgacg
     2281 atccggcgcg ccgcgaggag tcgctgttcg acgccatccc gcgcgacagc cgcaaggtct
     2341 atcgcatccg gccgatcgtc gagaagatcg tcgacgaggg ctcgttcttc gagatgggca
     2401 ggctctacgg ccgccccgtc gtcaccgcct tcgcccgcat cgacggctgg ccggtcgccg
     2461 tcatggcgag cgatccgatg ttttatggcg gcggctggac ggccgatgcc tgccagaagg
     2521 tggcgcgctt cgtcgacctt gccgagacct tccacctgcc ggtggtctat ttctgcgact
     2581 gcccgggctt cctgatcggg ctcgaggccg agaagagcgg cgtcatccgc cagggcgtgc
     2641 gcgccatgtc ggcgatgttc cagaccaccg tgccgtggtg cagcttcatc atccgcaacg
     2701 ccttcggcgt cgccggggcg gcgcaccaga acggcgcccg gctcaattgg cgctacgcct
     2761 ggccatcggg tcgctggggc tcgctgccgc tggagggcgg catcgaggca gcctaccgcg
     2821 ccgacatcga agccgcggac gaccccaagg cgagaatggc cgagatcgag gagcgcctga
     2881 acaagctgcg ctcgccgttc cgcagcgccg agaccttctg gatcgaggag atcgtcgatc
     2941 cgcgcgacag ccgcaggatt ctctgcgaat tcgtcgagct ggcggccccc gtgcgcggca
     3001 atggcccgag ccgccattgg atgcggcctt agcgtcccca gccgtagcct tttagccgcg
     3061 gcagcgtccc gcaggccgga tcgaagggcg gattgctgag atagtcgttg tcgacccgca
     3121 cgaaggcacg accgggcttg cggctcacga tcgcgctcat ggcgggtagc gaccagtcct
     3181 gggcaaacag cttgtccggc cagtcgagca gcggcaggtc gcgcgcgcga atgatgccct
     3241 cgcggctgtc gaccagggca cgcagacgct cgaggtagtc cgaccacaac cgcgtcagtg
     3301 ccgcgtcggg cagggcggcc gcgatggtga gcaccgtcat cgcggcgaca aggcggcgcg
     3361 caacagccgg caaccgcaag gtaacgaggg cggccggtgg gcccctctgc cagccaacat
     3421 gcagccacat gcagacgagc agcagcgcca gcagcaggcc tgccgcctgg cgcgccagat
     3481 agtgcgccgg cggatagaga atggagtcct ggtccagcag acgataccac ggcgtgaagg
     3541 ccagcgcggt ggcggcgatg cctatgatga caagcggccc ccgcccctgc aaccatgacg
     3601 gcctgacgag cccgatcgcc gcgcagatcg ccaggccgat cagcgggatg gcgaactgca
     3661 ggttctgcca gaaatcgaag ctcatggagc gcactttcac gaagtgtggg tggctccagt
     3721 actcggcgat ggtcgccgcc gagaccacgg acgcagcgag aaaagccaag gcggcgatgg
     3781 cggccggcaa tctcgccatc ccgtcggtcg acgtgcgcat cgaccagacg atcgcggcgg
     3841 caagcagcgg cccgagatag gtcattgctt cgtaggagcg cacgcagagc acgccgagca
     3901 cgcacagaaa tgccgcgtcg ccgagacgcc tcccccgctc cgtcaaagtc cccgccatgc
     3961 cggcggtcac ggcggcaaag gcggtgttgt attcgccgac gatgaagaag ctggtcgaca
     4021 aatagaccgt cgcgaccacg gcgatgacga tgcccagcag cacg
//
LOCUS       DASWGA010000491         5793 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1957521, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000491 DASWGA010000000
VERSION     DASWGA010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5793
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1957521"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..693)
                     /locus_tag="VF991_11750"
     CDS             complement(106..693)
                     /locus_tag="VF991_11750"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9557165.1"
                     /translation="MDTVVAPRTLDQKPIAPALFAHFVLRSSNMQPMVDWYTTVLNMR
                     IVKRNDFICFLTYDEEHHRLAIVNIAGLHAPDPKAWGLAHVAYTFRNVGELLSTYRRL
                     KKAGIEPYRPIHHGPTLSMYYHDPDGNSVELQVDCFKTKQEASAYFQTESFTRNPIGV
                     NFDPETLVAAYERGAPESELLRQPDGPMASPQGLA"
     gene            897..1901
                     /locus_tag="VF991_11755"
     CDS             897..1901
                     /locus_tag="VF991_11755"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX9557166.1"
                     /translation="MKLALLIGTAAVAGTLLATYGPGGGTFAGFGARSAPPHYLGYIE
                     GESTLVAPPVAGRLVARSVERGGRVGKGERLYAIDTTQAEAEVARALATLAEFQARHA
                     NLLTGRRNEEQEVIRAQRREIEAHLGLAEADLKRQSDLLSRNFASRQSYDQAVAQVAE
                     LRARAASLTAKERAGDLAAREAEIAAAAALIEQNQASLARARNRLADLTPVAPEDALV
                     ENTFFNVGEWVPAGSPVVSLLPDHRVKLRFFLPETEMAKVRPGVRVRFTCDSCPPDLG
                     ATITYSASRAEYTPPVIYSQGARARLVFMIEARPDPGQLPLQPGVPISVEALAADTKP
                     "
     gene            1898..2821
                     /locus_tag="VF991_11760"
     CDS             1898..2821
                     /locus_tag="VF991_11760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557167.1"
                     /translation="MSLAIDVHDLVKRYGSRTVVDRLSLSIEQGRICGFLGPNGSGKT
                     TTLRMICGLLTPDGGGGTCLGHDLVREREAIKRQTGYMAQRFGLYDDLTIRENLEFVG
                     RVYSLDRVKQRIDQSLERLGLSNRQRQIVGSLSGGWKQRLALAACVLHEPRLLLLDEP
                     TAGVDPKARRAFWDEIHAYAAQGITVLVSTHYMDEAERCHEIAYIAYGELMARGTGAD
                     IVRQSGLVAFVAQGTGADRLAASLRDVPGVSAAAFGATLHVCGAERDALLKAIAPFQA
                     DPALRWQEAEPTLEDLFIHLMGMARDNMAEV"
     gene            2824..3993
                     /locus_tag="VF991_11765"
     CDS             2824..3993
                     /locus_tag="VF991_11765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003614589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557168.1"
                     /translation="MGYFAAVRGFWMRLTAIIVKEVRPLRRDRLSFGLMFGMPILELL
                     LFGYAIDTDPRHLPTALVVADQSRITRTVLSALSNTGYMDFTHRPATESEANTLLQRG
                     EVQFVVRVPSDFTRRLVRGERTQVLIDADATDPMAAANSLAAAGPAIEQALTRDLVGP
                     LEAWAGRADAIELVVHRRYNPEGKSRLNIVPGLLAVILSVTMVLMTALAVTREREHGT
                     METLLATPVRPIEVMIGKIVPYFVIGSIQTCVILTISWLLFDITVEGSLPLLLFSTAL
                     FIVVNLALGFTLSTVSQNQLQAMQASFFILLPSILLSGFMFPFRGMPAWAQWLGEMLP
                     ATHFIRIARGLMLKGATFDDISGELVALGIILIVVSALAISRYRITLDGVTKPAA"
     gene            4028..4939
                     /locus_tag="VF991_11770"
     CDS             4028..4939
                     /locus_tag="VF991_11770"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9557169.1"
                     /translation="MSAAADLPDSLSRLIPSRVARGFFLAVVSGLFFNFLNAAVKELA
                     GEMPPLYVAWGRWLAGIALIAPYLLGRVGWAGMRTREMKLHCLRGLFHTPGYGLWYEA
                     VVWLPLATMAALGFTGPIFVTLGAVIFLRETVHWRRWVGVAAGFAGMLVIVRPGLVDM
                     NPGIVMMMVAVPLIAGSNLLAKVVAARDQPAVVVLWQSVVGAVCFTPLGIWFWQTPTA
                     YQLGLFAVMGFFGTMGYFFITWAYRLLDISALQPVTFLGIVWAALMDVAVWGKTSDVW
                     TFVGAAIIVAATTYIAHRETRAGGRRE"
     gene            4936..5706
                     /locus_tag="VF991_11775"
     CDS             4936..5706
                     /locus_tag="VF991_11775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9557170.1"
                     /translation="MTDRLAGKVALITGGASGLGANAAALMVREGAMVVVADIAQDRG
                     KAVADKLGSSGHFVKLDVTSEDNWKAAIGETVDKYGAIHVLLNSAGIGLSKTVEEITL
                     EEWRRVHAIDLDGVFLGCKHGVAEIKKHTHKLGGSVINISSISGIIAGANMAAYNSAK
                     AGVRLLSKSVALHCAKSGYNIRCNSVHPTFIDTPILDKYRDRFGNEVMQQKLGRQVPI
                     GRLGRPEEVGWALVFLASDESSFMTGSEVVIDGGISAM"
BASE COUNT          915 a         1960 c         1915 g         1003 t
ORIGIN      
        1 gacgaggtcc atcgcgacca ggtcggccgg ctggagatcg ccaagtacaa ctgagcccgg
       61 gagcaggact aacgcgaagg ccgcccttac gggcggcctt tgtcgttagg cgagtccctg
      121 cggcgaggcc atcgggccat cgggctggcg cagcagttcc gattccggcg caccccgctc
      181 ataggccgcg accagcgttt ccggatcgaa attgacgccg atcgggttgc gcgtgaagga
      241 ctcggtctgg aagtaggccg acgcctcttg cttcgtcttg aagcaatcga cctgcagctc
      301 gaccgagttg ccgtcgggat cgtggtaata catcgacagc gtcggcccgt gatgaatcgg
      361 ccggtagggc tcgatgccgg ctttcttcag gcggcgatag gtcgacagca gctcgccgac
      421 attgcggaac gtataggcga catgcgccag gccccaggcc ttgggatcgg gcgcgtgcag
      481 gccggcaatg ttcacgatcg ccaagcgatg gtgctcctcg tcgtaggtca ggaagcagat
      541 gaagtcgttg cgcttcacta tgcgcatgtt gagcaccgtc gtgtaccagt cgaccatcgg
      601 ctgcatgttg gacgagcgca gcacgaaatg ggcgaacaag gcgggggcga tgggcttctg
      661 atcgagggtg cggggagcaa caacggtgtc catggtcgac ctcctgggat gtcgcagtct
      721 acgccagaaa caataaaaac aaaccggccg gaaatgccgc tttctcgggg gtttccgcag
      781 gggtagattt gacggcgaca atttcagccg tgccgtgcag tggcggaacg ttccgttccg
      841 gctcgaagaa tgaacgtcat cccctcgaca agccgcgttc cccggagccc gcagccatga
      901 agctcgccct gttgatcggt accgccgcgg tcgccggcac gttgctggcc acctacggcc
      961 cgggcggagg gaccttcgcc gggttcggcg cgagatccgc gccgccgcac tatctcggct
     1021 atatcgaagg cgagagcacg ctcgtggcgc cgccggttgc cggccgcctc gtggcccgat
     1081 cggtcgagcg cggcggccgt gtcggcaaag gcgagcgcct ctacgccatc gacacgacac
     1141 aggccgaagc cgaggtcgcg cgggccttgg cgacgctggc ggaattccag gcgcggcacg
     1201 cgaacctgct gaccggcaga cgaaacgaag agcaggaggt gattcgcgcg cagaggcgtg
     1261 aaatcgaggc gcacctggga ctggcggagg cggacctgaa gcggcagagc gatctgctgt
     1321 cgcgcaattt cgcctcgcgc caatcctatg accaggccgt cgctcaggtc gccgaactgc
     1381 gtgcccgcgc tgcctccctc accgccaagg aacgggcggg cgacctcgcc gcccgggagg
     1441 ccgagatcgc cgccgcggcg gcgctgatcg agcagaatca ggccagcctc gcgcgggcgc
     1501 gcaaccggct cgccgacctg acgccggtgg cgcccgagga cgcgctggtc gagaacactt
     1561 tcttcaatgt cggcgaatgg gtgccggccg gctcgccggt cgtatcgctg ctgcccgacc
     1621 atcgcgtcaa gctgcgcttc ttcctgcccg agaccgaaat ggccaaggtg cggccgggcg
     1681 ttcgcgttcg cttcacctgt gacagctgcc cgccggatct gggcgccacc atcacctata
     1741 gcgcgtcgcg cgcggaatac acgccgccgg tcatctactc ccagggcgcg cgcgccaggc
     1801 tggtgttcat gatcgaggcg cggcccgatc cggggcagct tccgctgcag cctggcgtac
     1861 ccatcagcgt ggaggccttg gcggcggaca ccaagccgtg agcctggcga tcgacgtcca
     1921 cgatctggtg aaacgctacg gctcgcgcac cgtggtcgac cgtttgagcc tgtcgatcga
     1981 acagggccgc atctgcggct tcctggggcc caacggctcg ggcaagacca cgaccttgcg
     2041 catgatctgc ggcctgctga cgcccgacgg cggtggcggc acctgcctcg gtcatgacct
     2101 ggtgcgcgag cgcgaggcga tcaagcgcca gaccggctac atggcccagc gcttcggcct
     2161 ctacgatgac ctcaccatcc gcgagaacct cgaattcgtc ggccgcgtct acagcctcga
     2221 ccgcgtcaag cagcggatcg accagtcgct cgagcggttg ggactgtcga accggcaacg
     2281 ccagatcgtg ggttcgctgt cgggcggctg gaagcagcgg ctggcgctgg ccgcctgcgt
     2341 gctgcacgag ccgcgcctgc tcttgctcga cgagccgacc gccggcgtcg atcccaaggc
     2401 gcgtcgcgcc ttctgggacg agatccatgc ctatgccgcg cagggcatca ccgtattggt
     2461 ttccacccat tacatggacg aggccgagcg ctgtcacgag atcgcctata tcgcctacgg
     2521 cgagctgatg gcccgcggca ccggcgccga catcgtgaga cagtccggcc tggtcgcctt
     2581 tgtcgcccag ggcaccggcg ccgaccggct ggccgcttcg ttgcgcgacg tgccgggcgt
     2641 cagcgccgcc gccttcggcg cgaccctgca tgtctgcggc gccgaacgcg acgcgctcct
     2701 gaaggcgatc gcacctttcc aagccgatcc tgccctgcgc tggcaggagg ccgagccgac
     2761 gctcgaggac ctcttcatcc atctcatggg gatggcgcgg gacaacatgg cggaggtttg
     2821 accgtgggtt actttgcagc cgtgcgcggc ttttggatgc gactcaccgc catcatcgtc
     2881 aaggaagtgc ggccgctccg ccgcgaccgg ctgagcttcg gcttgatgtt cggcatgccg
     2941 atcctggagc tcctgctgtt cggctacgcg atcgacaccg atccgcgaca cctgccgacc
     3001 gccctggtcg tggccgacca gagccggatc acccgcaccg tgctgtcggc gctctccaac
     3061 accggctaca tggacttcac gcaccggccg gcgaccgaga gcgaggccaa cacgctcctg
     3121 caaaggggcg aggtgcagtt cgtcgtcagg gtaccctccg acttcacgcg ccgtctggtg
     3181 cgcggtgagc gcacgcaggt gctgatcgac gccgacgcca ccgacccgat ggcggcggcc
     3241 aattcgctgg ccgcggcggg gccggcgatc gagcaggcgc tgacgcgcga cctcgtgggt
     3301 ccgctcgagg cgtgggccgg gcgtgccgat gccatcgaac tcgtggtgca ccgccgctac
     3361 aatcccgagg gcaagtcgcg gctcaacatc gtgcccggct tgctcgccgt gatcctctcg
     3421 gtgaccatgg tgctgatgac ggcgctcgcc gtcacccgcg agcgcgagca cggcaccatg
     3481 gagaccctgc tggcaacgcc ggtccggccg atcgaggtca tgatcggcaa gatcgtgcct
     3541 tacttcgtca tcggttcgat ccagacctgc gtcatcctga cgatctcctg gctgctgttc
     3601 gacatcaccg tcgagggcag cctgccgttg ctcctgttca gcacggcgct cttcatcgtc
     3661 gtcaacctcg ccctgggctt caccctgtcg accgtaagcc agaaccaact ccaggccatg
     3721 caggcctcct ttttcattct gctgccctcg atcctgctct cgggcttcat gtttccattc
     3781 cgcggcatgc ccgcctgggc gcagtggctg ggcgagatgc ttccggccac gcatttcatc
     3841 cgcatcgccc gcggcctgat gctgaagggc gcgaccttcg acgacatctc aggcgagctg
     3901 gtggcgctcg gcatcatcct catcgtcgtg tcggcgctgg cgatcagccg ctaccgcatc
     3961 accctggacg gcgttacgaa accggcggct tgaccgccgc tccgcgcaca ggcaagcccg
     4021 atggcccatg tccgcggccg ccgacctccc ggattcgctc tcccgtctga tcccgtcgcg
     4081 ggtggcccgc ggcttcttcc tcgccgtcgt ctccggcctg ttcttcaact tcctcaacgc
     4141 cgcggtgaag gagctggcgg gcgagatgcc gccgctctac gtcgcctggg gccgctggct
     4201 ggcaggcatc gcgctgatcg cgccctacct gctggggcgc gtcggctggg ccggcatgcg
     4261 gacacgggag atgaagctcc attgcctgcg cggcctgttc cacacgccgg gctacgggct
     4321 gtggtacgaa gcggtcgtct ggctgccact cgccaccatg gcggcgctgg gcttcaccgg
     4381 cccgatcttc gtcaccctgg gcgccgtgat cttcctgcgc gagaccgtgc actggcggcg
     4441 ctgggtcggc gtcgccgccg gtttcgccgg catgctggtg atcgtccggc ccggcctcgt
     4501 cgacatgaac ccagggatcg tgatgatgat ggtcgcggtg ccgctgatcg ccggctccaa
     4561 cctcctggcc aaggtcgtcg cggcgcgcga ccagcccgcc gtggtcgtgc tgtggcagag
     4621 cgtggtcggc gccgtctgct tcacgccgct cggcatctgg ttctggcaga cgccgaccgc
     4681 ttatcagctc ggcttgttcg cagtcatggg cttcttcggc accatgggct acttcttcat
     4741 cacctgggcc tatcgcctgt tggacatttc cgccctgcaa cccgtcacct tcctcggcat
     4801 cgtctgggcc gccttgatgg acgtcgcggt ctggggcaag acctccgacg tctggacctt
     4861 cgtgggtgcg gcgatcatcg tggcggccac gacctacatc gcccatagag agacaagagc
     4921 gggaggaaga cgggaatgac ggatcgtctg gccggcaagg tggccctgat caccggcggc
     4981 gcctcggggc tgggcgccaa cgccgccgcg ctgatggtgc gggaaggcgc catggtggtg
     5041 gtcgccgaca tcgcccagga ccgcggcaag gcggtggccg acaagctggg ttcctccggc
     5101 catttcgtga agctcgacgt caccagcgag gacaactgga aggccgccat cggcgagacc
     5161 gtcgacaagt atggcgcgat ccatgtgctg ctcaactccg cgggcatcgg cctcagcaag
     5221 acggtcgagg agatcacgct cgaggagtgg cgccgcgtgc acgccatcga tctcgacggc
     5281 gtgttcctgg gctgcaagca cggcgtcgcc gagatcaaga agcacaccca caagctcggc
     5341 ggttcggtga tcaacatctc gtcgatctcc ggcatcatcg ccggcgccaa catggcggcc
     5401 tacaactcgg ccaaggcggg cgtgcggctg ttgagcaagt cggtggcgct gcattgcgcc
     5461 aagtcgggct acaacatccg ctgcaactcg gtgcatccga ccttcatcga cacgcccatc
     5521 ctcgacaaat accgcgaccg cttcggcaac gaggtcatgc agcagaagct cggccgccag
     5581 gtgccgatcg gccggctggg ccggcccgag gaagtcggct gggcgttggt atttttggca
     5641 tcggacgagt cgagcttcat gaccggctcg gaggtcgtga tcgacggtgg aatttcggcg
     5701 atgtgactga ggaggaggaa acgaaccatg ctgctctctc tcgacggccg taagatctat
     5761 ttcgacctcg ccggaccgca gtccgcgccg acc
//
LOCUS       DASWGA010000492         4029 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1444293, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000492 DASWGA010000000
VERSION     DASWGA010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4029
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1444293"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VF991_11780"
     CDS             complement(<1..471)
                     /locus_tag="VF991_11780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557171.1"
                     /translation="MKRRLLVFALLAAPLVARAQPADWQTVVGRDLRFRLEMPAPAEE
                     TKAGEKEKGHTSERIAWASKRDGEMFDFDYVDYQPGWFSDRDTKEMARDLGRGDAEKA
                     FPRAKFKYVRDEPVTLQGWDGYALDIEDADGAVVMMRTYIVKDRLYRLLVTAKND"
     gene            complement(468..1322)
                     /locus_tag="VF991_11785"
     CDS             complement(468..1322)
                     /locus_tag="VF991_11785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557172.1"
                     /translation="MLDRCDRVQIAVHDAAKAAQRFGQLLGSEIARRDHSRHLGARRT
                     IVAVGESEFELCEADGAGLTQDFLSQRGEGLMTAGYCTADLDGMVKRWEGLGVPYDRD
                     AEQLYLAPEMTFGLPMVISETTYRPRIGPVSSLYETTNTLVSDWRRAAAFYAGLFGLD
                     PARFSEIGSERFGYIGTLTLFDPPNRLDRIELSQVTDDVHAMGRFAKKYGDSLYMCYV
                     EVHDWPAVRGRLLEAKARYTPRGSDPATDPDGGWVHPKELHGLLLGISRTGLAWDWSG
                     RKDLVPAA"
     gene            complement(1337..2701)
                     /locus_tag="VF991_11790"
     CDS             complement(1337..2701)
                     /locus_tag="VF991_11790"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEX9557173.1"
                     /translation="MSAPPSGGGTPIENRRQLIEYFAAGNKPRTAWRMGTEHEKFGFH
                     TATLKPLAYDGPDGIRAMLEGMTRFGWEPVVEGNNVIALQRGLASVTLEPGGQFELSG
                     APLETLHETADENAQHLDEVKAVAGEIGAAFIGLGFAPEWTREDMHWMPKGRYKIMRE
                     YMPKKGKLGLDMMLRTCTVQTNLDFESEADMVKKFRVSLALQPLATALFANSPFKEGK
                     PAGFKSYRSHIWTDTDPDRCGMLPFVFEDGFGFERYADYMLGVPMYFVYRDGKYIDAS
                     GQSFKDFMKGKLPARPGELPTLNDWADHVTTAFPEVRLKRYLEMRGADSGPLPALNAL
                     PALWVGLLYDQTALDAAWDLVKDWTVADHDVLRAETPKSGLSMVFRDRLLAEWARDVV
                     EIAHAGLRARKRLDAHGSDETVYLAPLDRAVASGLAPADELLAKWQNEWHGSFEPLFR
                     DYAY"
     gene            complement(2847..3635)
                     /locus_tag="VF991_11795"
     CDS             complement(2847..3635)
                     /locus_tag="VF991_11795"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEX9557174.1"
                     /translation="MSVSRLFVEADLAAGGEAPLSEAQVHYLRHVVRRPDGAKLLLFN
                     GRDGEWQGTLEGTGKKAAVARVAERMREQAPEPDVWLCFAPVKRARIDYIAEKATELG
                     AALLQPVLTQHTMVERVNVDRLRANAIEAAEQTERLTVPEVRAPVDLARLLADWPVGR
                     RLLMCDETGGGPPIAGVLSGLDAAARAAPWAIVIGPEGGFADSELSALRRIKDVTGVG
                     LGPRILRADTAALAALACWQALVGDWQRPTPRLAADYRTSRIIV"
     gene            3670..>4029
                     /locus_tag="VF991_11800"
     CDS             3670..>4029
                     /locus_tag="VF991_11800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HEX9557175.1"
                     /translation="MTADRTGGFTDIDRQHWSLRYLPPWARPYGRLARWDRPIGTWLL
                     LLPGWWAIALAAPAGHWPDLGLLALFAVGAVVMRGAGCVVNDMADRDIDARVARTAAR
                     PIPSGAVSLRQARLFLAA"
BASE COUNT          617 a         1381 c         1375 g          656 t
ORIGIN      
        1 gtcgttcttg gcggtgacca gcaggcggta aagccggtcc ttcacgatgt aggtgcgcat
       61 catgacgacg gcgccgtcgg catcctcgat gtcgagcgca tagccgtccc agccctgcaa
      121 ggtcacgggc tcgtcgcgca cgtacttgaa cttggcgcgc gggaaggcct tttcggcatc
      181 gccgcggccg agatcgcgcg ccatctcctt ggtgtcgcgg tcggagaacc agccgggctg
      241 atagtcgaca tagtcgaagt cgaacatctc gccgtcacgc ttggacgccc aggcgatgcg
      301 ctcggaagtg tggcccttct ctttctcgcc ggccttggtc tcctcggcgg gcgccggcat
      361 ttccagccgg aagcgaaggt cgcggccgac cacggtctgc cagtcggcag gctgggcccg
      421 tgccacgagc ggcgcggcga gcaaggcgaa gacgagcaga cgacgtttca cgctgccggc
      481 accagatctt tgcggcccga ccagtcccag gcgagcccgg tgcgcgagat gccgagcagc
      541 aggccgtgca gctccttggg atgcacccag ccgccgtcgg gatcggtcgc gggatcgctg
      601 ccgcgcggcg tatagcgcgc tttggcctcg agcaggcggc cgcgcaccgc cggccagtcg
      661 tggacttcga cgtagcacat ataaagcgag tcgccgtact tcttggcgaa gcggcccatg
      721 gcgtgcacgt cgtcggtcac ctggctgagc tcgatgcggt ctagccggtt gggcggatcg
      781 aacaaggtga gcgtgccgat atagccgaag cgctcgctac cgatctcgct gaagcgcgcg
      841 ggatcaagcc cgaacaggcc ggcatagaag gccgccgccc gacgccagtc gctcaccaag
      901 gtgttggttg tctcgtagag gctcgacacc ggcccgatcc gcggccggta ggtggtctcc
      961 gaaatcacca tgggcaggcc aaaggtcatc tcgggcgcga gatagagctg ctcggcgtcg
     1021 cggtcgtacg ggacacccag cccctcccat cgcttgacca tgccgtcgag gtcggcagtg
     1081 cagtagcctg ccgtcatcaa gccctcgccg cgctggctta ggaaatcctg cgtcagtcct
     1141 gcgccgtcgg cctcgcaaag ctcgaactcg ctctcgccca ccgccacgat cgtgcgccgg
     1201 gcgccgagat ggcggctatg atcgcggcgc gcgatctcgc tgcccaaaag ctggccaaaa
     1261 cgctgcgccg ctttggcggc gtcgtggacg gcaatctgca cgcgatcaca gcggtcgagc
     1321 atggcccgac gatacctcag taggcgtagt cgcggaacag cggctcaaac gagccatgcc
     1381 actcgttctg ccatttggcc aagagttcgt cggccggggc gaggccgctc gccaccgcgc
     1441 ggtcgagcgg cgccaggtaa accgtctcgt cgctgccgtg tgcatcgagg cgcttgcggg
     1501 cgcgcaagcc ggcatgggcg atctcgacca cgtcgcgcgc ccattccgcg aggaggcggt
     1561 cgcgaaagac catcgacagg ccggacttgg gcgtctcggc gcgcagcacg tcgtggtcgg
     1621 cgaccgtcca gtccttcacc aggtcccagg ctgcgtcgag tgccgtctgg tcgtagagca
     1681 agccgaccca cagagcgggc agcgcattga gcgccggcag cggacccgaa tcagcgccgc
     1741 gcatctcgag atagcgcttc agccggacct cggggaacgc cgtcgtgacg tggtcggccc
     1801 agtcgttcag ggtcggcagc tcgcccggcc gcgccggcag cttgcccttc atgaaatcct
     1861 tgaaactctg gcccgaggcg tcgatgtatt tgccgtcgcg gtagacgaag tacatcggca
     1921 cgccgagcat gtagtcggca taacgctcga agccgaaccc gtcctcgaat acgaagggca
     1981 gcatgccgca acggtcgggg tcggtgtcgg tccagatatg gctgcggtag ctcttgaagc
     2041 cggcgggctt gccttccttg aagggcgagt tggcgaacag ggcggtcgcc agcggctgca
     2101 gcgccagcga gacgcggaac ttcttcacca tatcggcttc cgactcgaag tcgagattgg
     2161 tctgcacggt acaggtgcgc agcatcatgt ccaaaccgag cttgcccttc ttgggcatgt
     2221 actcgcgcat gatcttgtag cgccccttgg gcatccagtg catgtcctcg cgcgtccatt
     2281 ccggcgcgaa gccaaggccg atgaaggcgg cgccgatctc gcccgccacc gccttgacct
     2341 cgtcgaggtg ctgggcattt tcgtcggcgg tctcgtgcag ggtctcgagc ggcgcgccgg
     2401 agagctcgaa ctggccgccc ggctcgagcg tgacgctggc caggccgcgc tgcagggcga
     2461 tgacgttgtt gccctcgacg acaggctccc agccgaagcg cgtcatgccc tcgagcatgg
     2521 cgcggatgcc gtccggcccg tcataggcga gcggtttcag cgtcgcggta tggaagccga
     2581 acttctcgtg ctcggtgccc atccgccacg cagtgcgtgg cttgttgccg gccgcaaagt
     2641 attcgatcag ctgccgccga ttctcgatcg gcgtgccgcc gcccgacggt ggtgcggaca
     2701 tacgaccttc tactccctgg tcgccccgca gctttgaagc ggccgggagc ggcacggccc
     2761 gcatgagcaa ttctcacgcg agcacgcggc tggttcatgc tgttcaagtc cccgtctccc
     2821 acaccggcgg ggccaagcgc aagcggtcag acgatgatcc tagatgtgcg ataatcggcg
     2881 gcgagccgcg gtgtcggccg ttgccagtcg ccgaccagcg cctgccagca ggcaagggcg
     2941 gcaagggctg ccgtatcggc gcgcaggatg cgcggaccga ggcccacccc cgttacgtcc
     3001 tttatgcgac ggagtgcgct aagctccgag tcggcgaagc cgccttcggg accgatcacg
     3061 atcgcccacg gggcggcccg tgcggccgca tcgaggccgg acagcacgcc ggcgatcggt
     3121 ggaccgccgc cggtctcgtc gcacatcagc aggcgccgtc cgacaggcca atcggcgagc
     3181 aagcgcgcga ggtcgacggg cgcgcgcacc tcgggcacgg tgagccgctc ggtctgctcc
     3241 gccgcctcga tggcgttggc gcgcaaacgg tcgacgttca cgcgctcgac catggtgtgc
     3301 tgcgtcaaga ccggctgcag gagcgccgcg ccgagctcgg tcgccttttc agcgatgtag
     3361 tcgatgcgcg cgcgcttcac cggcgcgaag caaagccaga cgtcgggttc cggcgcctgc
     3421 tcgcgcatgc gctcggcgac gcgcgccacg gccgccttct tgccggtccc ttcgagcgtg
     3481 ccctgccatt caccgtcgcg gccgttgaac agcagcagct tggcaccatc gggccggcgc
     3541 acgacgtggc gcaggtagtg gacctgcgcc tcgctgagcg gtgcctcgcc gccggcggca
     3601 aggtcggcct cgacgaacag acgcgatacg ctcatggagt tccctcggtc atcgctgcat
     3661 gatggcgcca tgacggccga ccgaacaggg ggcttcaccg acatcgaccg gcagcactgg
     3721 tcgctgcgct acctgccgcc gtgggcgcgg ccctatggcc ggctggcgcg ctgggatcgg
     3781 ccgatcggca cctggctgct gctgctgccc ggctggtggg cgatcgcgct ggcggcgccg
     3841 gccggccatt ggcccgacct cggcctgctg gcgctgttcg cggtcggcgc cgtcgtcatg
     3901 cgcggcgccg gctgcgtcgt caacgacatg gccgaccgcg atatcgacgc ccgcgtcgcc
     3961 cgcaccgccg cccggccgat cccgagcggc gccgtctcgc tgcgccaggc caggctgttc
     4021 ctggcggcg
//
LOCUS       DASWGA010000493         5090 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_819990, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000493 DASWGA010000000
VERSION     DASWGA010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5090
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_819990"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..610)
                     /locus_tag="VF991_11805"
     CDS             complement(<1..610)
                     /locus_tag="VF991_11805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9557176.1"
                     /translation="MSVSRQELLIFTIARLLKDCRSIAVGASSPIPGAGALLARHWAA
                     SDTPSRRLFLTILGSGRLNAMTSGGVELFDMAAQGRIDAFFLGGGQIDGQANINLVGA
                     GGTYPQTAVRWPGSFGSAYLYYLVTKVILFREEHSRRVMVPKVDFISAPGPRDDGVYR
                     PGGPIGLLTELCWFSFDKARRRFRLETVHPGHSLEEVHDHTGF"
     gene            complement(607..1452)
                     /locus_tag="VF991_11810"
     CDS             complement(607..1452)
                     /locus_tag="VF991_11810"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX9557177.1"
                     /translation="MSQDWLLASADALAAQLPDGAKIAVPHDTLGVAMETTRALIRRG
                     AKNLHVVCVPIGGLQVDLLIGAGCVGTLETSAITFGEYGTPYRFHDALKQGAIRMLDA
                     TCPAIHAALEAGHKDIPFIPLRGLLGSDLVVHRPDWKTIDNPFAQEGAAHDPILLLPA
                     IRPDFAVFHAPYADRDGNVFIGRRRDLATMAQASTKGALVTVEEVREVDLLASEETAA
                     GTLPAIYVGHAAIAQRGAWPCGLWDLYATDEAHFRRYGELARTSDGFARYLDEFVHVR
                     RQAAE"
     gene            complement(1513..2481)
                     /locus_tag="VF991_11815"
     CDS             complement(1513..2481)
                     /locus_tag="VF991_11815"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9557178.1"
                     /translation="MADQDPTAAPVSVPSNLAATYVAPYRCGFLERSGARLRYACWNV
                     PGTQRGTVVVLTGRGEFIEKYSTEVVGELLGRGFAVIALDWRGQGLSDRMLADRNKGH
                     IDTFATYIADLQLFLDKVVVPVAPRPVLALCHSMGAHIAMRALAENGSGPFAAGLFVA
                     PMTGLRREAMLRSVLMLMPEVPAVEERYLFGTGPFLGLAREFHSNFVTHDERRYRFTE
                     DWFAADPRLALGGPTIGWARQAVRSMTAVLAPGYLERIELPLLLLSAGEDRLVDPKTH
                     GPVAARLRRGEHLDIAEARHEIMMETDDIRARFWEAFDRLAKTATG"
     gene            2812..>5090
                     /locus_tag="VF991_11820"
     CDS             2812..>5090
                     /locus_tag="VF991_11820"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9557179.1"
                     /translation="MIRQGLVLLLAVVATIVGWRLLDGDIDAATVEGPLHGVTYAPWA
                     KDQDPIEAKASGVFSFLRTAFTDTPPPAVKPRKEQIERDFAMLAGKVNYVRTYRTSDG
                     GEVMPEIAARNGLKLVPGAWIYSANEAKQQFGRDAGEVNAEETRALIRMANQNPNIER
                     VLVGNENILRWDGQKDQRDPNATSPAQLIREIRNVKRNVKVPVSTAEPWHVWLHYPEL
                     TREVDYLAVHILPYWDEQSSETPLDYLKSRIALLKQAYPNKNIIVTEVGWPSNGAQRR
                     SPGSGLVKVATPAEQAKNVRDAVAWLRAQNIDHFVVEAVDQPWKSYDLEGKAGGYWGL
                     WDADRQAKFAWTGPIERFPQWTACAAWSLAAALPLMMLFLWRWPGLGTAGQVGFCGLV
                     ALSASALVYGASVAAGTYMVAAEMVGWAVLAFFLALSLAMALAQALEMAETIWRRRWS
                     REAMPAADLIARQPTGRAWPKVSLHLAICNEPPAMVIQTLDSLAKLDYPDVEVIVIDN
                     NTKDPAIWRPVQDYCAQLGERFRFFHFDVMKGFKAGALNYVLSQTAPDAKIIGVIDSD
                     YVVRPDWLKALVPYFDDGRISYVQAPQDHRDWQGDRFKEMLNWEYAGFFDIGMCLRNE
                     YDAIIQHGTMTLVRRDLMEEMGGWATWCITEDTELGLRLMQKGYGAMYSRERFGHGLT
                     PDHFAGYKKQRFRWAYGAMQILKAHAGKMLSNSTRLSFWQKYHFISGWTPWFADALNL
                     IFTWAGLAWVLAVILPPLFG"
BASE COUNT          872 a         1656 c         1773 g          789 t
ORIGIN      
        1 cgaagccggt atggtcgtgc acttcctcga ggctgtggcc gggatggacc gtctccagcc
       61 ggaagcgccg gcgcgctttg tcgaaggaga accagcagag ctcggtcaga agaccgatcg
      121 gaccacccgg ccgatagacg ccgtcgtcgc gcgggccggg agcggaaatg aagtcgacct
      181 tgggcaccat gacccggcgg ctatgctcct cgcggaacag gatcaccttg gtcaccaggt
      241 agtagaggta ggccgagccg aaggagccgg gccagcgcac cgccgtctgc ggataggtac
      301 cgccggcgcc gacaagattg atgttggcct ggccgtcgat ctgcccgccg cccaggaaga
      361 aggcgtcgat gcggccctgc gcggccatgt cgaacagctc gacgccgccg ctggtcatgg
      421 cgttgaggcg gccgctgccc aggatggtga ggaagagccg ccgcgacggc gtgtcgctcg
      481 ccgcccaatg gcgcgccagc aaggcgccgg cgccggggat cggcgaggaa gcgccgaccg
      541 cgatgctacg gcaatccttg agcaggcggg cgatggtgaa gatcagcagt tcctggcgcg
      601 aaacgctcat tccgcggcct ggcgcctgac gtgaacgaat tcgtcgaggt agcgcgcgaa
      661 gccgtccgat gtgcgcgcca gctcgccata gcggcggaaa tgcgcctcgt cggtcgcata
      721 gaggtcccac aggccgcatg gccaggcgcc gcgttgggcg atggcggcat gcccgacata
      781 gatcgccggc agcgtgccgg cggccgtctc ttcgctcgcc agcaagtcga cctcgcgcac
      841 ctcttcgacc gtcaccaaag cgcccttggt cgaggcctgc gccatcgtgg cgaggtcgcg
      901 gcggcggccg atgaacacgt tgccgtcgcg gtcggcatag ggagcatgga agacggcgaa
      961 gtcgggacgg atggcgggca gcagcaggat tggatcatgg gcggcgccct cttgagcgaa
     1021 gggattgtcg atcgtcttcc aatccgggcg atgcacgacg agatcgctgc ccagcaggcc
     1081 acgcagcggg atgaagggaa tgtccttgtg gccggcctcg agcgcggcat ggatggcggg
     1141 gcaggtggcg tcgagcatgc ggatggcgcc ctgcttcagc gcgtcgtgga agcggtaggg
     1201 cgtgccgtat tcgccgaagg tgatggccga ggtctccagc gtgccgacgc atcccgcgcc
     1261 gatcagcagg tcgacctgca ggccgccgat cgggacgcag acgacatgga ggttctttgc
     1321 gccgcggcgg atcagcgccc gcgtcgtctc catggcgacg cccagcgtgt cgtgcggcac
     1381 ggcgatcttg gcgccgtcgg gcagttgcgc ggcgagcgcg tcggccgagg cgagcagcca
     1441 gtcctgggac atgcgtccct cccgtggtcg ttgcgagcat tctgtgaccg gccgacagag
     1501 gcggcaagcc gatcaacccg ttgccgtttt cgccagtcgg tcgaaggctt cccagaagcg
     1561 tgcccggata tcgtcggtct ccatcatgat ctcgtggcgc gcctcggcga tgtcgagatg
     1621 ctcgccacgg cgcagccgcg ccgcgacggg cccgtgcgtt ttcggatcga ccagccggtc
     1681 ctcgccggcg ctcagcagca gcagcggcaa ttcgatgcgc tcgagatagc ccggcgccag
     1741 caccgccgtc atggagcgca cggcctggcg cgcccagccg atggtcggtc cgcccagggc
     1801 gagccgcgga tcggcggcga accagtcctc ggtgaaacgg tagcgccgct cgtcgtgggt
     1861 cacgaagttg gagtgaaatt cgcgagccag gccgaggaag gggccggtgc cgaacaggta
     1921 gcgctcctcg accgccggca cctccggcat cagcatcaga acggatctca acatggcttc
     1981 gcgccgcagc ccggtcatcg gtgcgacgaa gaggccggcc gcgaacggtc ccgatccgtt
     2041 ctcggcgagg gcgcgcatcg cgatatgggc gcccatggaa tggcaaagcg cgaggaccgg
     2101 ccggggtgcc accggaacga ccaccttgtc gaggaacaat tggaggtcgg cgatataggt
     2161 cgcgaacgtg tcgatatggc ccttgttgcg atcggccagc atgcggtcgg acaggccctg
     2221 gccgcgccaa tccagggcga tgacggcaaa gccgcggccc aacagctcgc cgaccacttc
     2281 ggtcgagtac ttctcgatga actcgccgcg gccggtcaga acgacgacgg tgccgcgctg
     2341 agttcccggg acgttccaac aggcatagcg caggcgcgcg cccgaccgct cgaggaagcc
     2401 gcaacgatag ggtgccacgt aagtggccgc caggttggat ggcacggaga ccggcgccgc
     2461 ggtcggatct tgatcagcca ttgcgtgcgg cgttgtggcg aagcccgccg atcgacgcca
     2521 gcagagattt aggcattttg gccatcatca ccggcaatct ctttaccgtt tcgagaggca
     2581 cggctataga tcgccccggt cgccgcatcg tctgcgaagg gtcgcagacg aggaaaccgg
     2641 gcgcaaggaa gcctccaaga ggtcagccgc actgcgtggt tatcggctcg tcggttgagt
     2701 cgatccggca cggtccttgc gtcgacgttc atcgtccgca ggagacatgc gaccgcgatc
     2761 ccgacgtgag cgtgtgccac cggcgggggt gtggggagcg atcgcctttt catgatccgt
     2821 cagggcctgg tccttctgtt agccgtggtg gccacgatcg tcggttggcg cctgctggat
     2881 ggcgacatcg acgcggcgac cgtcgaaggc cctctgcatg gcgtcaccta tgcgccgtgg
     2941 gccaaggacc aggatccgat cgaggccaag gcgagcggtg ttttcagctt cctgcgcacg
     3001 gccttcaccg acaccccgcc gccggcggtc aagccgcgca aggagcagat cgagcgcgac
     3061 ttcgccatgc tcgccggcaa ggtcaactac gtccgcacct atcgcacgtc ggacggcggc
     3121 gaggtcatgc cggagatcgc cgcccgcaac ggcttgaagc tggtgccggg cgcgtggatc
     3181 tacagcgcca acgaagccaa gcagcagttc ggccgcgatg ccggcgaggt caatgccgag
     3241 gaaacgcgcg cgctgatccg catggccaac cagaacccca acatcgagcg cgtgctggtc
     3301 ggcaacgaga acatcctgcg ctgggacggc cagaaggatc agcgcgatcc caacgccacc
     3361 agcccggccc agctcattcg cgagatcagg aacgtcaagc gcaacgtcaa ggtgccggtc
     3421 agcaccgccg agccgtggca cgtctggctg cactatcccg aactcacgcg cgaggtcgac
     3481 tacctggcgg tccacatcct gccctactgg gacgagcagt cgagcgaaac gccgctcgac
     3541 tatctcaaga gccgcatcgc gctcctgaag caggcctacc ccaacaagaa catcatcgtc
     3601 accgaggtcg gctggccgtc gaacggcgcc cagcgccgca gcccgggcag cggcctggtc
     3661 aaggtcgcca cgcccgccga gcaggccaag aacgtccgcg acgcggtggc ttggctgcgc
     3721 gcgcagaaca tcgatcactt cgtggtcgaa gcggtcgatc agccgtggaa gtcctacgac
     3781 ctggaaggca aggcgggcgg ctactggggc ctgtgggatg ccgaccggca ggcgaagttc
     3841 gcgtggaccg ggccgatcga gcgcttcccg caatggacgg cttgcgcggc gtggtcgctg
     3901 gcggcggcgc tgccgctgat gatgctgttc ctgtggcgct ggcccggcct cggcacggca
     3961 ggccaggtcg gcttctgcgg cctggtggcg ctgtcggcga gcgccctggt ctacggcgcg
     4021 tcggtcgcag cgggcaccta catggtggcc gccgagatgg tgggctgggc ggtgctcgcc
     4081 ttcttcctgg cgttgagtct ggccatggcg cttgcccagg cgctcgagat ggccgagacg
     4141 atctggcgcc ggcgctggtc gcgcgaggcg atgccggcgg ccgacttgat cgcccgccag
     4201 ccgaccggcc gggcctggcc caaggtgtcg ctgcacctcg ccatctgcaa cgagccgccg
     4261 gcgatggtga tccagacgct cgattcgctg gccaagctcg actatcccga cgtcgaagtg
     4321 atcgtcatcg acaacaacac caaggatccc gcgatatggc ggccggtgca ggactactgc
     4381 gcccagctcg gcgagcgctt ccgcttcttc cacttcgacg tcatgaaggg tttcaaggcg
     4441 ggcgcgctca actacgtgct gagtcagacc gcgcccgacg cgaagatcat cggcgtgatc
     4501 gacagcgact acgtcgtgcg gccggactgg ctgaaggcgc tggtgccgta tttcgacgac
     4561 ggccggatca gctacgtgca ggcgccgcag gatcaccgcg actggcaggg cgaccgcttc
     4621 aaggaaatgc tgaactggga gtatgccggc ttcttcgaca tcggcatgtg cctgcgcaac
     4681 gaatacgacg ccatcatcca gcacggcacg atgaccctgg tgcgccgcga cctgatggag
     4741 gagatgggcg gctgggcgac ctggtgcatc accgaggaca ccgagctcgg gctgcgcctg
     4801 atgcagaagg gctatggcgc catgtacagc cgcgagcgct tcggccatgg cctgacgccc
     4861 gaccatttcg ccggctacaa gaagcagcgc ttccgctggg cctacggcgc catgcagatc
     4921 ttgaaggcgc atgccggcaa gatgctgtcc aacagcacgc ggctgagctt ctggcagaag
     4981 taccacttca tctccggctg gacgccgtgg ttcgccgatg cgctgaacct gatcttcacg
     5041 tgggccggcc tcgcctgggt gctggcggtg atcctgccgc cgctcttcgg
//
LOCUS       DASWGA010000494         1573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1071088, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000494 DASWGA010000000
VERSION     DASWGA010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071088"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VF991_11825"
     CDS             complement(<1..413)
                     /locus_tag="VF991_11825"
                     /inference="COORDINATES: protein motif:HMM:NF024313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557180.1"
                     /translation="MAIINHEAELSRAGANITGGWSRILFFARRYPLGAVGAVIVLVF
                     VLTAVFAPLIAPMDPTTTDAKASLARPGSVFWLGADFMGRDMFSRIVFGARISLTVGL
                     GATLAGGILGVTIGLMSGYLGGTVDLITQRLMDIM"
     gene            complement(421..1368)
                     /locus_tag="VF991_11830"
     CDS             complement(421..1368)
                     /locus_tag="VF991_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557181.1"
                     /translation="MGSYLVRRFLLMALTLFGMSVLIFVMLRLVPGNIADILVDAAGI
                     ADAKEKAKITRELGLDQPIIVQYGQWIGGLSRGDLGFAYVSERPAIEEIAPRIPISAK
                     LAGMALFFSVLIGVPFGVISAVRQNTALDYVLRVLSLSGLSLPSFWLGLLVLMAAVNW
                     FGTIPIYSNEPRGFFQEVGLLAIPAAVVGFRSSALIMRLTRSSMLEVMRQDYIRTARS
                     KGASQTSVNYDHALRNALLPVVTIIGIEAAFLVGGLIVTETVFNIPGVARFLVEAIRW
                     RDYPIVQNLVMLIAFVVVTVNFLVDMAYMVLDPRIKYAD"
BASE COUNT          307 a          505 c          531 g          230 t
ORIGIN      
        1 tgcatgatgt ccatcaggcg ctgggtgatg agatcgacgg tgccgccgag atagccgctc
       61 atcaggccga tggtcacgcc gaggatgccg ccggcaaggg tcgcgccgag gccgacggtg
      121 agcgaaatgc gcgcgccgaa gacgatgcgg ctgaacatgt cgcggcccat gaagtcggcg
      181 cccagccaga agacgctgcc gggacgggcc agcgaggcct tggcgtcggt cgtcgtcggg
      241 tccatcggcg cgatcaaagg ggcgaacacg gcggtcagga cgaagaccag cacgatcacc
      301 gcgccgaccg cgcccagcgg gtagcggcgc gcgaagaaga ggatacggct ccacccgccg
      361 gtgatattgg cgccggcgcg gctcagttcg gcttcatggt tgatgatggc catggttgcc
      421 tcagtctgcg tatttgatgc gcgggtcgag gaccatgtag gccatgtcga ccaggaagtt
      481 gaccgtgacc accacgaagg cgatcagcat cacgaggttc tgcacgatcg ggtagtcgcg
      541 ccagcggatc gcctcgacca ggaagcgcgc gacgcccggg atgttgaaca ccgtctcggt
      601 gacgatcagg ccaccgacca ggaacgccgc ctcgatgccg atgatggtga ccacgggcaa
      661 cagcgcgttg cgcagcgcat ggtcgtagtt caccgaggtc tgcgacgcgc ccttggagcg
      721 cgcggtccgg atgtagtcct ggcgcatgac ctcgagcatg gacgagcgcg tcaggcgcat
      781 gatcagcgcc gaacttcgga agccgacgac ggccgccggg atggcgagca gcccgacctc
      841 ctggaagaag ccgcgcggct cgttgctgta gatcggaatg gtgccgaacc agttgaccgc
      901 cgccatcagc accaggaggc cgagccagaa cgacggcaac gacaggccgc tgaggctgag
      961 cacccgcagg acgtagtcga gcgccgtgtt ctgccgcacc gcgctgatga cgccgaacgg
     1021 cacgccgatc agcacggaga agaacagcgc cattccggcc agcttggcgc tgatcgggat
     1081 gcgcggggcg atttcctcga tcgccggccg ctccgagaca taggcaaagc ccaaatcgcc
     1141 gcgcgatagc ccgccgatcc actggccgta ctgcacgatg atcggctggt cgagccccag
     1201 ctcgcgggtg atcttggcct tctccttggc gtcggcgatg ccggcggcat cgaccaggat
     1261 gtcggcgatg ttgcccggca ccaggcgcaa catcacgaag atcagcaccg acatcccgaa
     1321 cagggtcaat gccatcagca gaaagcgccg gaccaggtac gagcccatca gtccctccgg
     1381 ctaccgccac tgtatgaaca cggctcaaat tcctctcccc cgctaggggg agaggttagg
     1441 tgagggggca acgacgtgcg catccccctc acccgccctc tccccctagc gggggagagg
     1501 agcatgaggt ggcgatgtgt ccactccgta gccaagcggc gcatgactgc tacctgtcga
     1561 gccagaggtc ttc
//
LOCUS       DASWGA010000495         3673 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2199296, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000495 DASWGA010000000
VERSION     DASWGA010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3673
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2199296"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..745)
                     /locus_tag="VF991_11835"
     CDS             complement(<1..745)
                     /locus_tag="VF991_11835"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX9557182.1"
                     /translation="MQRRSLMAGLAAIGWLRATPAFAQTDPLPSWNEGPVKRAILDFV
                     PKVTTAGNRDFVPMAERIACFDNDGTLWTEQPNYFQVIFATDRVKALAARHPEWKALE
                     PFKWVIEDNRDALAAMGEKGMLEIMVATHSGLTTEEFRQAVLEWLATARHPRFKRPYT
                     DLIYQPMLELMAFLRANQFKTFIVSGGGIEFMRPWTEKAYGIPPEQVVGSSVKTRFEM
                     RNGKPALLRLPELNFNDDQADKPVGINQHI"
     gene            complement(761..1255)
                     /locus_tag="VF991_11840"
     CDS             complement(761..1255)
                     /locus_tag="VF991_11840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TspO/MBR family protein"
                     /protein_id="HEX9557183.1"
                     /translation="MAARPRLGDLVGLVLFVALCLGIGALGAAVTASSVETWYADLAK
                     PSFNPPNAVFGPLWTVLYILMAVAAWRVWRAADRDTARGPLALFALQLALNLGWSVVF
                     FGLHKIGAAVATIVVLDVAILVTALAFRTVDRLAALLMAPYLAWVAFATVLNVAIWRL
                     NPTV"
     gene            complement(1260..1931)
                     /locus_tag="VF991_11845"
     CDS             complement(1260..1931)
                     /locus_tag="VF991_11845"
                     /inference="COORDINATES: protein motif:HMM:NF018745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1345 domain-containing protein"
                     /protein_id="HEX9557184.1"
                     /translation="MPRNAFRHWWVTRFVVGRRRLLLSFVAGVVLFALLPGHMRTPTR
                     FILAWDLTALLYVVFTLGMIFNSTVETCHDRASLYDEGDWVILMLVVASASASFVAIF
                     AELSSFTAQRGPAALGLFITLATVSLSWAFTHIVFTLHYANVYYKPDDDGPGGLAFPG
                     HRAPDYRDFLYYSFVIGCASQTGDVATVSPAMRRITLVHGVIAFAFNTAILALTINVG
                     ASLLH"
     gene            2207..2989
                     /locus_tag="VF991_11850"
     CDS             2207..2989
                     /locus_tag="VF991_11850"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEX9557185.1"
                     /translation="MATTKKARSPGVITLPKPAKALNGKAVSARASGTPEARDTARLL
                     LEIEAIHCRPDNPYIFTSGRASPVYIDCRKLISFPEARAKIMNHALKAIDKQIGWNRI
                     DAVAGGETAGIPFAAFLAALAKKPMVYVRKQPKGFGRMAQIEGELKPGKRVLLVEDLA
                     TDGGSKLVFIEALKKAEAKVTDCFVIFHYGIFPQSVEMLAAAGVKLRALATWWDALEA
                     AQKHKYFDERGLVETKAFLEAPEQWSANHGGRPPAPRPMLGR"
     gene            3103..>3673
                     /locus_tag="VF991_11855"
     CDS             3103..>3673
                     /locus_tag="VF991_11855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557186.1"
                     /translation="MIRRVLFLILALSALAAPARAKDELVLAMTQTPGTWNPLINAML
                     AKSLISNMTARPLTAWNADWKLVCLVCTELPTIENGKARVIDLPGGKKGMEVDIEMRD
                     FSWGDGVPVTAKDVAFTLEVGKHPLSGVASSEGYKRILKLDAKDDRHFTMTIDRVTFD
                     YNSISLSLVPAHIEKPIFDANPAEYRNKTA"
BASE COUNT          702 a         1186 c         1215 g          570 t
ORIGIN      
        1 cgatgtgctg gttgatgccg acgggcttgt cggcctggtc gtcattgaag ttcaattccg
       61 gcaggcgcag cagagcgggc ttgccgttgc gcatctcgaa ccttgtcttg acgctgctac
      121 cgacgacctg ttccggcgga atgccgtagg ctttctccgt ccatggccgc atgaactcga
      181 tgccgccgcc cgagacgatg aaggtcttga actggttggc gcgcaggaag gccatcagct
      241 cgagcatcgg ctgatagatc aggtcggtgt agggccgctt gaagcgcgga tggcgtgccg
      301 tggcgagcca ctcgagcacg gcctgcctga actcctcggt ggtgaggccg ctatgcgtcg
      361 ccaccatgat ctcgagcatg cccttctcgc ccatggcggc cagcgcatcg cggttgtcct
      421 cgatcaccca cttgaagggc tcgagcgcct tccattcggg atggcgggcg gccagcgcct
      481 tcacgcgatc ggtggcgaag atcacctgga aatagttggg ctgctcggtc cacagcgtgc
      541 cgtcattgtc gaagcaggcg atgcgctcgg ccatcggcac gaagtcacga ttgcccgcgg
      601 tggtgacctt gggcacgaag tcgaggatcg cccgtttgac gggaccctcg ttccacgacg
      661 gcagaggatc ggtttgcgcg aacgccggcg tcgcccgcaa ccagccgatc gcggcgagac
      721 cggccatcaa tgatctgcgc tgcatcgcac ttcctcttct tcacaccgtc ggattgagcc
      781 gccagatcgc gacgttgagc acggtcgcaa acgccaccca ggcgagataa ggcgccatca
      841 ggagcgccgc caggcgatcg acggtgcgga aggcgagcgc cgtcaccagg atggcgacat
      901 ccagcacgac aatcgtggcc accgccgcgc cgatcttgtg caggccgaag aacaccacgc
      961 tccagccgag attgagcgca agctgcaggg cgaacagggc gagcggtccg cgcgcggtat
     1021 cgcggtcggc agcacgccag acgcgccacg ccgccacggc catcaggatg tagagcacgg
     1081 tccacagcgg cccgaagacc gcgttgggcg gattgaacga cggcttggcg agatcggcat
     1141 accaggtctc gacgctgctc gccgtcaccg cagcgccaag cgcgccgatg cccaggcaaa
     1201 gcgccacgaa cagcaccagg cccacaaggt cgccgagccg cgggcgcgcc gccacggcgt
     1261 caatgaagca ggctcgcgcc gacattgatc gtaagcgcga ggatggcggt gttgaaggcg
     1321 aaggcgatga cgccgtgcac cagggtgatg cggcgcatcg ccggcgagac cgtcgcaacg
     1381 tcgccggtct gggaggcgca gccgatgacg aaggagtagt agagaaagtc gcggtagtcg
     1441 ggagcgcgat ggccggggaa ggcaaggccg cccggcccat cgtcgtccgg cttgtagtag
     1501 acattggcat agtggagcgt gaacacgatg tgggtgaacg cccaggacag cgacacggtc
     1561 gccagcgtga tgaaaagacc gagcgccgcc gggccgcgct gcgccgtgaa cgaggacagc
     1621 tcggcgaaga tggcgacgaa actggcgctg gcgctggcga ccaccagcat caggatgacc
     1681 cagtcgccct cgtcgtagag cgacgcccgg tcgtggcagg tctccaccgt cgagttgaag
     1741 atcatgccga gcgtgaagac gacgtagagc aaggccgtaa gatcccaggc gaggatgaac
     1801 cgcgtcggcg ttcgcatatg gcccggcaag agggcgaaca ggaccacgcc cgccacgaac
     1861 gacagcagca ggcggcggcg gccgacgacg aaccgggtga cccaccagtg gcggaaggcg
     1921 tttctgggca tgcgttctcc cctcccggca ctctgccatc ccgggaaggc gttggcctac
     1981 ggtctcggct cggccatggc gaacctgtgc tgggcgccgc cctggcctgc cgcgccggcc
     2041 ggtcggctcg tcgatttact gggttcccgt aacgtttctt gacgaaactg actaattttc
     2101 gcacaccgac ccgcccgatc cgtcgtcgcc gcccttgccg gtcctgtgga tgaacgctaa
     2161 acacacgacc gtcattttgt cgcaagcggc gcgggggata agcagcatgg cgacgacgaa
     2221 gaaggctaga tcgccgggag ttattacttt gcccaagccg gccaaggcat tgaacggaaa
     2281 ggctgtttcc gcccgggcca gcggcacgcc ggaggctcgc gacacggcgc gcctgctgct
     2341 cgagatcgag gccatccact gccggcccga caacccgtac attttcacct cgggccgggc
     2401 gagcccggtc tacatcgact gccgcaagct gatctccttt cccgaggcgc gcgccaagat
     2461 catgaaccac gcgctcaagg cgatcgacaa gcagatcggc tggaacagga tcgacgccgt
     2521 ggccggcggc gaaaccgccg gcattccctt tgcggcgttc ctggcggccc tggccaagaa
     2581 gccgatggtc tatgtccgca agcagcccaa gggttttggc cgcatggccc agatcgaggg
     2641 cgagctcaag ccgggcaagc gcgtcctgct ggtcgaggac ctcgccaccg acggcggcag
     2701 caagctggtc ttcatcgagg cgctgaagaa ggccgaggcc aaggtcaccg actgcttcgt
     2761 gatcttccat tacggcatct tcccgcagag cgtggagatg ctggcggcgg ccggcgtcaa
     2821 gctgcgcgcg ctcgccacct ggtgggacgc gctggaagcg gcgcagaagc acaagtactt
     2881 cgacgagcgc ggcctagtcg agaccaaggc gttcctcgag gcgccggaac aatggtcggc
     2941 caaccacggc ggccgcccgc ctgcgccacg cccgatgctg gggcgctgac agcaaaattg
     3001 tcatcccgag gccgaaggcc gagggacctt taaggccatg agcaaaggtc cctcgctgcg
     3061 ctcgggatga cagcgaagcg ttcggcatgc gaccttcgcc aaatgatccg tcgcgttctt
     3121 tttctcatcc tcgcgctgtc agcgcttgcc gctcctgccc gcgccaagga cgagttggtg
     3181 ctcgccatga cgcagacgcc gggcacctgg aatccgctga tcaacgcgat gctggccaag
     3241 tcgttgatca gcaacatgac ggcgcggccg ctgacggcgt ggaacgccga ctggaagctg
     3301 gtttgcctgg tctgcaccga gctgccgacc atcgagaacg gcaaggcgcg ggtgatcgac
     3361 ctgcccggcg gcaagaaggg catggaagtc gatatcgaga tgcgcgactt cagctggggc
     3421 gacggcgtgc cggtcaccgc caaggacgtg gcgttcacgc tcgaggtcgg caagcacccg
     3481 ctgtccggcg tcgcctcgtc ggagggttat aagcgcatcc tgaaactcga cgccaaggac
     3541 gaccgtcatt tcaccatgac gatcgaccgc gtcacgttcg actacaacag catcagcctc
     3601 agcctggtgc cggcgcatat cgaaaagccg atcttcgacg ccaacccggc cgaataccgc
     3661 aacaagaccg cct
//
LOCUS       DASWGA010000496         3697 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2465147, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000496 DASWGA010000000
VERSION     DASWGA010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3697
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2465147"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VF991_11860"
     CDS             complement(<1..344)
                     /locus_tag="VF991_11860"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX9557187.1"
                     /translation="MKMKAGVLTTCGAARPFAKSKPIQVLEVDLDPPGEGELLVKVGG
                     GGLCHSDLSLINGDRPRPVPIVLGHEGAGEIVEVGSGVHDVKKSDHVCFTFNVSCGRC
                     RRCLEGRPYICER"
     gene            complement(344..1087)
                     /locus_tag="VF991_11865"
     CDS             complement(344..1087)
                     /locus_tag="VF991_11865"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX9557188.1"
                     /translation="MSDFFDLTGKVALVTGGSRGLGYQMVKAFAQHGADLFITSRKLE
                     NCEKVAAEVRGMGRKAHTHACNVANWPELDGLVDAAYAAFGKVDILVNNAGSSPLAPS
                     SLETPELLFDRIVSLNFKGPFRLMSLVGSRMAAGDGGSIINISSAGALRPRPQIAPYA
                     GAKAALNAITEAFAFEYGPKVRVNTISPGRFLTDVSKAWSEEHKLNSTAALKRSGRPE
                     EIVTAALYLASSKSSFTTGSVVRVDGGIA"
     gene            1342..>3697
                     /locus_tag="VF991_11870"
     CDS             1342..>3697
                     /locus_tag="VF991_11870"
                     /inference="COORDINATES: protein motif:HMM:NF021424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX9557189.1"
                     /translation="MSIQVALHHRTTYRYDRPVALGPQVVRLRPAPHSRTPVPSYALK
                     VLPAQHFINWQQDPQGNHLARLVFPEKTDRFEVVVDLIADMTVTNPFDFFLEPEAETW
                     PFAYDASLAEEIAPFRKLEPAGPLLLAWLAKVDRSKRRTVDFLVGLNERLQKGIGYIV
                     RLEPGVQSCEETLQLAKGSCRDTGWLLVTILRHLGFAARFASGYLIQLTPDEKPLEGP
                     EGPTRDFTDLHAWCEVYLPGAGWIGLDPTSGLFTGEGHIPLACTPEPSSAAPIEGAVE
                     TAEVQFSYDMKVTRVRETPRTTRPYTDEQWAGLLEVGEAIERDIAKDDLRLTMGGEPT
                     FVSIDDMDGAEWNTLALGPEKRRLAGVLFRKLADRFASGPLLHFGQGKWYPGEQLPRW
                     ALTCHWRRDGEAIWRDPHLYALESKPTGATPETAHRFALAFAQRLQLDPNYLFGAFED
                     TWYYLWRERRLPSNVTVDDAKVKDAMERERLARVFEKGLDSSVGFVLPVSRDHGRDHG
                     REHNGKAQNGHGGRWRSGPWFLRSEKCYLIPGDSPIGYRLPLDSLPWTAPADADFITE
                     PDPMAPHPDLPPLDAFRCAPVLRRQEQGVPADTNGNGETRREAWRRALAPDLGPKPRV
                     GSSAAAIVRSAMVFEPRDGHLFVFMPPAERTEDYLELVTAVEDTAQELGQPVFVEGYP
                     PPGSDPRLLYFSVTPDPGVIEVNIHPSANWRELVDKTEIVYEQARTTRLGAQKFMIDG
                     RHTGTGGGNHVTLGGPSAADSPLLRRPDLLKSLLGYWLNHPSLSY"
BASE COUNT          602 a         1277 c         1203 g          615 t
ORIGIN      
        1 cgctcgcaga tatagggccg accttcgagg cagcgccggc agcgaccgca gctcacgttg
       61 aaggtgaagc agacatgatc gctcttcttg acgtcgtgca cgcccgagcc gacctcgacg
      121 atctcgcccg cgccctcgtg gcccagcacg atcggcaccg gccggggccg atcgccattg
      181 atcagcgaga ggtcggaatg gcaaagcccg ccgccgccca ccttgaccaa aagctcgccc
      241 tcgccgggcg ggtcgagatc gacctcgagg acctggatgg gcttgctctt ggcgaacggc
      301 cgggccgcgc cgcaggtggt gagaacgccg gctttcatct tcatcaggcg attcctccat
      361 cgacacggac cactgagccc gtggtgaaac tcgatttgct cgaagcgagg tagagcgccg
      421 ccgtgacgat ctcctccggc cggccgctgc gcttgagcgc cgccgtcgaa ttgagcttgt
      481 gctcctcgct ccacgccttg gagacgtcgg tgaggaagcg gccgggcgaa atggtgttca
      541 cccgcacctt cggcccgtac tcgaaggcga aggcttcggt gatggcgttg agcgcggcct
      601 tggcgccggc atagggcgcg atctgcggcc gcggcctgag cgcgccggcg ctcgagatgt
      661 tgatgatcga gccgccgtcg cccgccgcca tgcggctgcc gaccagcgac atcaggcgga
      721 acgggccttt gaagttcagc gacacgatgc ggtcgaacag tagttccggc gtctcgagcg
      781 acgagggtgc gagcggcgag gacccggcgt tgttgaccag gatgtcgacc ttgccgaagg
      841 cagcataggc cgcgtcgacc aggccgtcga gctcgggcca gttggcgacg ttgcaggcat
      901 gggtatgggc cttgcgtccc atgccccgca cctcggcggc gactttctcg cagttttcga
      961 gcttgcggct ggtgatgaaa aggtcggcgc cgtgctgggc gaaggctttt accatctggt
     1021 agcccaggcc gcggctgccg ccggtcacca gggcgacttt tccggtgaga tcaaagaaat
     1081 cgctcatcga atccctttgc tgcaactagc catccttcgc cttttcactt gctctttcat
     1141 gttcctctcc cccggtaggg ggagaggcta ggtgaggggg catcgacgtg cgcggccccc
     1201 ctcacccaac ctctccccct accgggggag aggagaaaga gaggaacatg atgggcaaag
     1261 ggtgcatgca ttgacgctgg catgtcactt gctaagtgta ttgtggagcg gaattgagcg
     1321 ggtcggcatg ggcatcccct cgtgagcata caagtcgcgc tgcatcatcg aacgacctac
     1381 cgatacgacc ggcccgtagc gctcggcccg caggtcgtac ggctgcgtcc ggcgccgcat
     1441 tcgcgaacgc ccgtgccgtc ctatgcgctc aaggtcctcc ccgcgcagca tttcatcaac
     1501 tggcagcagg atccccaggg caatcacctg gcgcgcctcg tcttcccgga gaagaccgac
     1561 cgcttcgagg tcgtggtcga cctgatcgcc gacatgacgg tgaccaatcc attcgacttc
     1621 ttcctcgagc ccgaggccga gacctggccg ttcgcctatg acgcctcgct cgccgaggag
     1681 atcgcgccct ttcgcaagct ggaaccggcg ggccccttgc tgttggcttg gctcgccaag
     1741 gtcgaccgca gcaagcggcg caccgtcgac ttcctcgtcg gcctcaacga gcggctgcag
     1801 aaagggatcg gctacatcgt gcgcctggag ccgggggtgc agagctgcga ggagacgctt
     1861 cagctcgcca agggctcgtg ccgcgacacc ggctggctgc tggtcaccat cctgcgccac
     1921 ctcggcttcg ccgcgcgctt tgcctcgggc tacctgatcc agctcacgcc cgacgagaag
     1981 ccgctggaag gacccgaagg cccgacccgc gacttcaccg acctccacgc ctggtgcgag
     2041 gtctacctgc cgggcgccgg ctggatcggc ctcgatccga cgtcgggcct gttcaccggc
     2101 gagggccaca ttccgctggc ctgcacgccc gagccgtcga gcgccgcgcc gatcgaaggc
     2161 gcggtcgaga cggccgaggt ccagttctcc tacgacatga aggtgacgcg ggtgcgcgag
     2221 acgccgcgca ccacccggcc ctacaccgac gagcagtggg ccggcctgct cgaggtcggc
     2281 gaggcgatcg agcgcgacat cgccaaggac gatctgcggc tcaccatggg cggcgagccg
     2341 accttcgtct cgatcgacga catggacggc gcggaatgga acaccctggc gctggggccg
     2401 gagaagcggc ggctggccgg cgtgctgttc cgcaagctcg ccgaccgttt cgcctccggg
     2461 ccgctgctgc atttcggcca gggtaaatgg tatcccggag aacagcttcc gcgctgggcg
     2521 ctcacctgcc actggcgccg ggacggcgag gcgatctggc gcgatcccca tctctatgcg
     2581 ctggaatcca agccgacggg cgccacgccc gagacggcgc atcgctttgc gctggctttc
     2641 gcgcaacgcc tgcagctcga tcccaactac ctgttcgggg ccttcgagga cacctggtac
     2701 tacttgtggc gcgagcggcg cctgccgagc aacgtcacgg tcgacgacgc caaggtgaag
     2761 gatgcgatgg agcgcgagcg gctggcgcgg gtcttcgaga agggtctcga cagttccgtc
     2821 ggcttcgtgc tgccggtttc ccgcgatcat gggcgcgacc atggacgcga gcacaacggc
     2881 aaagcccaga atggacacgg cggccgctgg cgcagcgggc cgtggttcct gcgctcggag
     2941 aagtgctacc tgattccggg cgattcgccg atcggctacc gcctgccgct cgattcgttg
     3001 ccctggacag cgccggccga cgcggacttt attaccgagc ccgatccaat ggcgccgcat
     3061 cccgatctgc cgccgctcga cgcctttcgc tgcgcacctg tcttgcgccg ccaggaacag
     3121 ggcgtgcccg ccgacaccaa cggcaatggc gagacccgtc gcgaagcctg gcgccgggcg
     3181 ctggcgcccg atctcgggcc aaaaccccgc gtcggcagct cggcggcagc catcgtgcgc
     3241 tccgccatgg tcttcgagcc gcgcgacggc cacctcttcg ttttcatgcc gcctgccgag
     3301 cgtaccgagg actatctcga gctcgtcacc gcggtcgagg acaccgccca ggaactcggc
     3361 cagccggtgt tcgtcgaagg ctacccgccg cccggcagcg atccgcggct gctctatttc
     3421 agcgtcacgc ccgaccccgg cgtcatcgag gtcaacatcc atccctcggc gaactggcgc
     3481 gagctcgtgg acaaaaccga gatcgtctac gagcaagcgc gcacgacgcg gctcggcgcc
     3541 cagaagttca tgatcgacgg ccgccatacc ggcaccggcg gtggcaacca tgtgaccctg
     3601 ggcggaccct cggccgccga ttcaccgctg ctgcggcggc ccgacctgct gaagagtctt
     3661 ttgggctact ggctcaacca cccctcgctc tcctacc
//
LOCUS       DASWGA010000497         2222 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2199427, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000497 DASWGA010000000
VERSION     DASWGA010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2199427"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..722)
                     /locus_tag="VF991_11875"
     CDS             complement(<1..722)
                     /locus_tag="VF991_11875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011651045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557190.1"
                     /translation="MTPAVSLKTWITIVGSTIGTFMAIINVQIVNASLGDIQGAIGAG
                     MDDGGWISTAYLVAEIVAIPLTGWLSQVFSTRRYLITNVVLFLVFSVACAYARNLEQM
                     IVLRALQGFCGGVLIPMSFTLIITLLPPARQPVGTAMFALAATVAPAIGPTIGGWLTE
                     TWGWQTIFYVNLAPGALMLVMLWLSLERAPMQLGLLRQGDWAGIATMALGLSALQIVL
                     EEGNKEDWFGSPFVTRLAIVAAV"
     gene            complement(739..1833)
                     /locus_tag="VF991_11880"
     CDS             complement(739..1833)
                     /locus_tag="VF991_11880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX9557191.1"
                     /translation="MSVLSYMAAIGLSRAVHAPSGRVLKRTAVGAVVLAGLGVAAAFA
                     YNYWTDGRFLQSTTNAYIRADYTVVSPKITGHIIEVLVRDNEPVTAGQVVARVDDRDF
                     KVALAQAKADVASDDAELGNLDAQIAQQQSAIDQEKAEIAAGKASLSYAEADNVRYAN
                     LKKSGYGTVQRAEKAETALRQKTAQLQKNRAGLLMAQRKIDMLASERAKAQAQRDRSL
                     AAVHQAELNLSYTSITTAVPGVVGARSLRVGQYVQAGTPLMAVVPLDAVYIVANYKET
                     QLTHVRAGQPAEVEVDSFPGITLKGHVDSVSPASGLEFALLPANNATGNFTKIVQRVP
                     VKIVLDDKTLAGSLRPGMSVEATIDTRARN"
BASE COUNT          369 a          703 c          770 g          380 t
ORIGIN      
        1 accgcggcga cgatggcgag acgagtgaca aagggcgagc caaaccagtc ctccttgttg
       61 ccctcctcca gcacgatctg cagcgcgctc aagcccagcg ccatggtggc gatgccggcc
      121 cagtcgccct ggcgcagcag gccgagctgc atgggcgcgc gctcgagcga cagccagagc
      181 atcaccagca taagcgcgcc cggcgccagg ttgacataga agatggtctg ccagccccag
      241 gtctcggtga gccagccgcc gatcgtcgga ccgatcgcgg gtgccacggt ggcggccagt
      301 gcgaacatgg ccgttccgac cggctgcctg gccggcggca gcagcgtgat gatcagggtg
      361 aaggacatcg ggatcagcac gccgccgcag aacccctgca gggcacgcag gacgatcatc
      421 tgctcgagat tgcgcgcgta ggcacaggcg acggaaaaga ccaggaacag caccacgttc
      481 gtgatcaggt agcggcgcgt cgagaagacc tgggagagcc agccggtgag cgggatggcg
      541 acgatctcgg ccaccaggta ggcggtcgag atccagccgc cgtcatccat gccggcgccg
      601 atggcaccct ggatgtcgcc cagcgaggca ttgacgatct gcacgttgat gatcgccatg
      661 aaggtgccga tcgtcgaacc gacgatggtg atccaggtct tcagggagac ggcgggagtc
      721 atggccgtag gccggccgtc aattcctcgc cctggtgtcg atggtcgcct cgaccgacat
      781 gccggggcgc aggctgccgg cgagcgtctt gtcgtcgagc acaatcttca ccggcacgcg
      841 ctgcacgatc ttggtgaagt tgccggtggc gttgttggcc gggagcagcg cgaattcgag
      901 cccgctcgcc ggcgacacgc tgtcgacatg gcccttgagc gtgatgccgg ggaaggaatc
      961 gacctcgacc tcggccggct ggcccgcccg cacgtgggtg agctgagtct ccttgtagtt
     1021 ggccacgata tagacggcgt cgagcggcac caccgccatc agcggcgtac cggcctggac
     1081 gtactggccg accctgagcg agcgggcgcc gaccacgccc ggcacggcag tggtgatcga
     1141 cgtgtaggag aggttgagct cggcctggtg cacggccgcc aggctgcgat cgcgctgagc
     1201 ctgggccttg gcgcgctccg aggcgagcat gtcgatcttg cgctgggcca tcaaaaggcc
     1261 ggcgcggttc ttctggagct gcgcggtctt ctggcgcagg gcggtctccg ccttctcggc
     1321 gcgctgtacg gtgccgtagc cgctcttctt caggttggcg tagcgcacgt tgtcggcttc
     1381 ggcgtaggac agcgaggcct tgccggcggc gatctcggcc ttctcctggt cgatcgccga
     1441 ctgctgctgg gcgatctggg cgtcgaggtt gccgagctcg gcgtcgtcac tcgcgacatc
     1501 ggccttggcc tgggcgagcg cgaccttgaa gtcacgatcg tcgacgcgcg cgacaacctg
     1561 gcccgccgtc acgggctcgt tgtcccggac caggacttcg atgatgtggc cggtgatctt
     1621 gggcgagacg accgtgtagt cggcacggat ataggcgttg gtggtcgact gcaggaagcg
     1681 gccgtccgtc cagtagttgt aggcgaaggc cgccgccacg ccgagaccgg ccagcacgac
     1741 cgcaccgaca gcggtgcgct tgaggactct gccggacggc gcgtggacag cgcgactgag
     1801 gccaatggcg gccatatagg aaaggacgga catgacgatt ctccccccga cagcaggacg
     1861 cgacgtccgg ctgcatgatc catttcggct agaggggagt cgttctcggt tgatactgca
     1921 tacgccgcgg cgattacggc gtcaggcagg cttaaatcat aggccgccgg ggttgaactt
     1981 gtcccgtctt tcgccctgcg tgcgtgcaga tcacctaagc tatttggtgg ggcaacggta
     2041 tgtggacgcc cgtcggctca cctgcgtgaa gccgacgggc accccgcccc ctcgtcttac
     2101 tgcttgaaac tgtcggaaat ctgattgaag ccgtcctggg tctgcctggc gatgtcgttg
     2161 atctgcgcgt tgcgatcgac ccattgccgc gccaccggcg gcacctcgta gcccatcacg
     2221 gt
//
LOCUS       DASWGA010000498         3000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_307561, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000498 DASWGA010000000
VERSION     DASWGA010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307561"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..850)
                     /locus_tag="VF991_11885"
     CDS             complement(<1..850)
                     /locus_tag="VF991_11885"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557192.1"
                     /translation="MIVLSENFRALFYAPFYAAQATGAFAEAGVEVTLKPSPDPVAAA
                     RALRAGEVDVMWGGPLRVMIVHDSEPGADLVCFADVVARDPFFVVGARPRPDFRLADL
                     ARVRFASVSEVPTPWICLADDLRRAGVDIDRLDRVCGPTMAENAAALGAGRLDAAQLF
                     QPYAEELIASGAGHVWYAAASRGLTAYTTLVTRRDTLARRADELLRMTRGMHRTLRWF
                     GATPAREIARTLKSYFPGVDETIFANAIERYRGLGLWGPDPVIRREGYDRLHAAMRAA
                     GALKRDV"
     gene            complement(857..2725)
                     /locus_tag="VF991_11890"
     CDS             complement(857..2725)
                     /locus_tag="VF991_11890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
                     /protein_id="HEX9557193.1"
                     /translation="MDKVNILLIDDQPAKLLSYEVILAELGENLIKANSPHEALGILL
                     KIDDVAVVLIDVVMPGVDGFQLAAMIREHPRFQKLAIIFVSAVQVGEMDHLRGYEIGA
                     VDYVSVPVIPKVLRAKVQVFVDLYRKTRQLEALNAELEERVAARTAELEAQTERLRQS
                     EERRSIALSAGDMGSWEVDLTTGHIEWDDGPYRIFGVDPAEFEPTVERLEAMIHPDDR
                     GNSALAAGIAAAGSRFQTEFRIVRPSGEVRWCYGAGIISRDAAGQPVRMNGVTVDITD
                     RKRAEERLVLLAREVDHRAKNTLAVVLSVLRLTRAPTTKDFINVVEGRVHALAATHNL
                     LSSTRWEGADLRKIVEEEMAPYYANHRQRVIARGPAVVLLPATAQAMALALHELATNA
                     AKYGALSTESGALAVTWRIGADALVLEWEETGGPAAAEPARLGFGLTIVRSSIEAQFR
                     GGVSYEWRSQGLRCTLSIPAAQIVASPPAAETPALLPDNDRERPSLAGMRLLVVEDEL
                     LVSMLVEEILGELGATVAGPYGRLADGLAAAKAERFDGAILDLNLAGEHADPLADLLL
                     ARGVPFVFITGYQRDSLDRRYANVPILQKPIDAAALESVLLTLLGNEPVLRVADGD"
     gene            complement(2747..>3000)
                     /locus_tag="VF991_11895"
     CDS             complement(2747..>3000)
                     /locus_tag="VF991_11895"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9557194.1"
                     /translation="ILERSPEVTIVLMDIMMPEMDGYETIALIRGNPALRRLPIVALT
                     AKAMKGDREKCLEAGASDYLAKPVNTEQLFSALRLWLHR"
BASE COUNT          472 a         1011 c         1063 g          454 t
ORIGIN      
        1 gaacgtcgcg cttgagcgct ccggccgcgc gcatggcggc gtgcaggcgg tcatagccct
       61 cgcggcggat caccgggtcg ggcccccaca ggccaagccc gcgatagcgc tcgatggcgt
      121 tggcaaagat cgtctcgtcc acgccgggga agtagctttt tagcgtgcgt gcgatctcgc
      181 gcgccggcgt ggcgccgaac cagcgcaagg tgcggtgcat gccgcgggtc atcctgagaa
      241 gctcatcggc gcgccgcgcc agcgtatcgc gccgcgtcac cagggtggtg taggcggtga
      301 gcccgcgcga tgccgccgcg taccagacat ggcccgcgcc cgaagcgatc agctcctcgg
      361 cataaggctg gaagagctgc gcggcgtcga gccggccggc gccgagggcg gcggcattct
      421 ccgccatggt cgggccgcac acgcggtcga ggcggtcgat gtcgacgccg gcgcgccgca
      481 ggtcgtcggc caggcagatc cagggcgtcg gcacctcgga aaccgaggcg aatctcacgc
      541 gggcgaggtc ggccagccgg aaatccggcc gcggcctggc gccgaccacg aagaacggat
      601 cgcgcgccac gacgtcggcg aagcagacga gatcggcgcc cggctcgctg tcgtgaacga
      661 tcatgaccct gagcggcccg ccccacatca catcgacttc gccggcgcgc agcgcgcggg
      721 cggcggcgac ggggtcgggc gagggcttca gcgtcacctc gacgcctgct tcggcgaacg
      781 caccggtcgc ctgcgcggcg taaaacggcg cgtagaagag ggcgcggaaa ttttccgaaa
      841 gaacgatcaa ggcgcgtcag tcgccatcgg ccacgcgcag caccggctcg ttgcctagca
      901 gggtgagcag cacgctttcg agggcggccg catcgatcgg cttttgcagg atggggacat
      961 tggcatatcg gcgatcgagg ctgtcgcgct gatagccggt gatgaacaca aatggcacgc
     1021 cgcgggccag cagcaggtcg gccaatggat cggcgtgctc gcccgccagg ttgagatcga
     1081 gaatggcgcc gtcgaagcgc tcggctttgg ccgccgccaa tccgtcggcc agccggccgt
     1141 aggggccggc cacggtggcg ccgagctcgc ccaggatttc ctcgaccagc atgctcacga
     1201 gcagctcgtc ctcgaccacg agcaggcgca tgccggcgag gctgggccgt tccctgtcgt
     1261 tgtccggcag tagcgcgggc gtctcggcgg ccggtgggga ggcaacgatc tgcgcggccg
     1321 gaatgctgag cgtgcagcgc aatccctggg accgccattc gtagctgaca ccgccgcgga
     1381 actgcgcctc gatgctggat cgtacgatgg tgaggccgaa gcccagccgg gccggttcgg
     1441 ccgccgccgg accgccggtc tcctcccact cgagcaccaa cgcgtcggcg ccgatgcgcc
     1501 aggtgacggc cagcgcgccg ctctcggtcg acagcgcgcc gtacttcgcg gcgttggtgg
     1561 caagctcatg cagcgccagc gccatggcct gggcggtcgc cggcagcagc acgacggccg
     1621 ggcccctggc gatgacgcgc tggcggtggt tggcgtaata gggcgccatc tcctcctcga
     1681 cgatcttgcg cagatcggcg ccttcccagc gcgtcgagga aagcagattg tgcgtggccg
     1741 ccagcgcatg gacacggcct tcgacgacgt tgatgaaatc cttggtcgtg ggcgcgcgcg
     1801 tcagccgcag caccgacagc acgacggcca gcgtgttctt ggcgcggtgg tcgacctcgc
     1861 gcgccagcag caccagccgc tcctcggcgc gcttgcggtc ggtgatgtcg acggtgacgc
     1921 cattcatgcg caccggctgg ccggccgcat cgcgcgagat gatgccggcg ccgtagcacc
     1981 agcgcacctc gccgctcggc cgcacgatcc tgaattcggt ctggaagcgg gaccccgcgg
     2041 cggcaatgcc ggcggcaagt gcgctgtttc cgcgatcgtc gggatggatc atcgcctcga
     2101 ggcgctcgac ggtcggctcg aactcggcgg gatcgacgcc gaaaatccga taggggccgt
     2161 cgtcccactc gatgtggccg gtcgtgaggt cgacctccca cgagcccatg tcgccggccg
     2221 acagggcgat ggagcggcgt tcctcgctct ggcgcaggcg ctcggtctgg gcctcgagct
     2281 cggcggtgcg ggcggcgacc cgttcctcga gctcggcgtt cagcgcctcg agctggcggg
     2341 tcttgcggta gagatcgacg aacacctgca ccttggcgcg cagcaccttg gggatcaccg
     2401 gcaccgacac gtagtcgacg gcgccgatct cgtagccgcg caggtgatcc atctccccga
     2461 cctggacggc cgagacgaag atgatggcga gcttctggaa acgcggatgc tcgcggatca
     2521 tggcagcgag ctggaagccg tcgacgcccg gcatgacgac gtcgatcagc acgacggcca
     2581 cgtcgtcgat cttgagcagg atacccaagg cctcgtgcgg cgagttggcc ttgatcaggt
     2641 tctcgcccag ctcggcgagg atgacctcgt agctcaaaag cttcgccggc tgatcgtcga
     2701 tcagcaggat gttgactttg tccatcgagg ccggtccgcg ggcgttctag cgatgcagcc
     2761 agagccgcag cgccgagaac aactgctccg tattgaccgg cttggcaagg tagtcggagg
     2821 cgccggcttc caggcacttc tcgcggtcgc ccttcatcgc cttggcggtc agcgccacga
     2881 tcggcaagcg gcgcagcgcc ggattgccgc ggatcagcgc gatcgtctcg tagccgtcca
     2941 tctccggcat catgatgtcc atcagcacga tcgtcacctc gggcgagcgc tcgaggatgg
//
LOCUS       DASWGA010000499         3047 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_184384, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000499 DASWGA010000000
VERSION     DASWGA010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184384"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..579)
                     /locus_tag="VF991_11900"
     CDS             complement(<1..579)
                     /locus_tag="VF991_11900"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557195.1"
                     /translation="MSQILRKLSRDVPAMLGLAIVLIVLVLAVLGPLIAPYPEDAAAS
                     HLTRRLRPPSADYLFGTDNLGRDIFSRVILGARGALTIALTVVSVATLIGVPLGLIAG
                     FRGGWLSEAIMRVTDVVLAIPQLVLALALAQLMSPSLESAMLALSLTYWPFFTRIVYA
                     ETRRLSSSLFVDALRGVGAGTGRIVFLHILPNA"
     gene            complement(694..1704)
                     /locus_tag="VF991_11905"
     CDS             complement(694..1704)
                     /locus_tag="VF991_11905"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557196.1"
                     /translation="MLRFVLRRCALVVPSLLGLLVVTFLLIHAVPSDPAVAMAGDAAT
                     PEQIERLRRQYGLDRPIWEQFAVYVDKVAHLDFGESAFSRRPVALDLAQRLPATLELT
                     FCALMISVFVGVPLGVVGALNHNAWPDYLLRVFSVLGIALAAFWVAIMLQLLFSMQLG
                     WLPLRGDLESTMTRPEPVTGFLVIDCLIAGRWDAFADALTHLVLPAVTLSLGGLATIV
                     RFTRAGVLDTLQQDFVFYERAMGYRWPRLVWIFVLRNSVTATVTQIGLLFGGLIAGGV
                     VVEAIFDWPGIGSYTVQAILTGDRQVMLAVTLLVGTVYAVVNILVDVVHGLLDPRLME
                     RP"
     gene            complement(1857..>3047)
                     /locus_tag="VF991_11910"
     CDS             complement(1857..>3047)
                     /locus_tag="VF991_11910"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557197.1"
                     /translation="LKPDNVTALEKLVVRFKLETSYAPFFAAIPSISIVNPRAIKPNE
                     KDGDWGKNWLASNGAGSGAYRIIPAGYRPLEYLDMEINEGHFLGWADNPKPVRKLAYR
                     PTKETSTRVLALLDGSLDCTDNNLPADQVAQINASKIAYVQKDVVMRTFVIRMNNTKP
                     PFNNLNARRCFAHAFNYMGFINDILGGYATRDPYPMPEDLWGIPKDAKGYDYDLKKAK
                     EYMAKAVAEGAPMKRPFELHVQTENEQSVQGAQLFQADLAQIGINLKVVGNIWSNLTT
                     AAAKPDTTPDLWVHWVSTYFVDPENWVGQMYDSQFHGTWKASAYYKNDEVDALLRKAR
                     ASVKQEEREPLYQEAIRKIMADSPDIWIYNSMQLQGLNKRVKGRRFCTVGQGQELRWI
                     TLDG"
BASE COUNT          565 a          946 c         1045 g          491 t
ORIGIN      
        1 ggcgttgggc aggatgtgca ggaagacgat gcggccggtg ccggcgccaa cgccgcgcag
       61 ggcatcgacg aacagggagg acgacagacg ccgcgtctct gcgtagacga tgcgggtgaa
      121 gaacggccag taggtgagcg acagcgccag catggcgctt tcgagcgaag gcgacatgag
      181 ctgcgccaag gcgagcgcca gcacgagctg ggggatggcc agcacgacgt cggtcacccg
      241 catgatggcc tcggatagcc agccgccgcg gaaacccgcg atcaggccga gcggcacgcc
      301 gatcagcgtg gcgaccgaga caacggtgag cgcgatggta agcgcgccgc gcgcgcccag
      361 gatgacgcgt gagaagatgt cccggccgag attgtcggtg ccgaagagat agtcggcgct
      421 gggcggccgc aggcggcggg tgagatgaga ggcggcggca tcctcgggat agggcgcgat
      481 cagcggcccc agcacggcca ggaccagcac gataagcacg atcgccagcc ccagcatcgc
      541 cggcacgtcg cgcgagagct tgcgcaggat ctggctcatc ccctgtccgt tatgatttct
      601 tgtcgtcctg agcgtagcga aggacctcat cgccgcttgc taccggcatg agatccttcg
      661 ctgcgctcag gatgactgag agggcgtgct tcatcaggga cgttccatca ggcgtggatc
      721 gagcaggccg tgcacgacat cgaccaggat gttgacgacg gcatagacgg tgcccaccag
      781 caatgtcact gccagcatga cctggcggtc gccggtcagg atcgcctgca cggtgtagct
      841 gccgatgccc ggccagtcga agatcgcctc gacgaccacg ccgccggcga tcagaccgcc
      901 gaacagcagg ccgatttgcg tcacggtcgc ggtcaccgag ttgcgcagca cgaagatcca
      961 gaccagccgc ggccagcgat agcccatggc gcgttcgtag aacacgaagt cctgctgcag
     1021 cgtgtcgagc acgccggcgc gcgtaaaacg cacgatggtg gcgagcccgc ccagcgacag
     1081 ggtcactgcc ggcagcacga gatgcgtcag cgcatcggcg aaggcgtccc agcggccggc
     1141 gatcaggcag tcgatcacca agaagcccgt caccggttcg ggccgcgtca tggtggattc
     1201 gagatcgccg cgcagcggca gccagccgag ctgcatggaa aacaggagct gcagcatgat
     1261 ggcgacccag aaggcggcca aggcgatgcc cagcaccgag aagacgcgca gcaggtagtc
     1321 cggccaggca ttgtggttga gcgcgccaac gacacccagc ggcacgccga cgaacaccga
     1381 gatcatcagc gcgcagaagg tgagctcgag cgtcgccggc aggcgctggg cgaggtcgag
     1441 cgccaccggc cgacgcgaga aggcgctttc gccgaagtcg aggtgcgcga ccttgtcgac
     1501 atagaccgcg aactgctccc agatcggccg gtcgaggccg tattgccggc gcaggcgctc
     1561 gatctgctcg ggcgtcgcgg catcgcccgc catggcgacc gccgggtccg acggcacggc
     1621 gtggatcaac aggaaagtga cgaccagcaa ccccaacagc gagggcacca caagggcgca
     1681 gcgccgcagg acgaagcgca gcaccgctag agcctgttcc ggttgtcatg ctcttccgga
     1741 ccgcgagcct ctggctcgct catgtcggcg cattcatatg cgctcatgag cgcgcgagac
     1801 gcgcgcggtc cagaagagca tgaacggccg tcgaacgaat cgaagcgaga catgctctag
     1861 ccgtcgaggg tgatccagcg caactcctgg ccctggccga cggtgcagaa acggcggccc
     1921 ttgacgcgct tgttgaggcc ctgcagctgc atggaattgt agatccagat gtcgggcgaa
     1981 tcggccatga tcttgcggat cgcttcctga tagagcggct cgcgctcctc ctgcttcacg
     2041 ctcgcgcggg ccttgcgcag gagcgcgtcg acctcgtcgt tcttgtagta ggccgaggct
     2101 ttccaggtgc cgtggaactg gctgtcgtac atctggccga cccagttctc gggatcgacg
     2161 aaataggtgc tgacccagtg gacccacaga tcgggcgtgg tgtcgggctt ggcggcggcg
     2221 gtcgtcaggt tcgaccagat gttgccgacc accttgaggt tgatgccgat ctgcgccagg
     2281 tcggcctgga agagctgggc accctgcacg ctctgctcgt tctccgtctg cacgtgcagc
     2341 tcgaacggcc gcttcatcgg cgcgccctcg gccaccgcct tggccatgta ctccttggcc
     2401 ttcttgaggt cgtaatcgta gcctttggcg tccttcggaa tgccccacag atcctcaggc
     2461 atcggatagg gatcgcgcgt ggcataaccg cccaagatgt cgttgatgaa gcccatgtag
     2521 ttgaaggcat gggcgaagca gcgccgtgca ttgaggttgt tgaacggcgg cttggtgttg
     2581 ttcatgcgga tgacgaaggt ccgcatgacc acgtccttct gcacataggc gatcttggac
     2641 gcgttgatct gcgccacctg gtcggccggc aggttgttgt cggtgcaatc gagcgagccg
     2701 tcgagcagcg ccagcacgcg ggtcgaggtc tccttggtcg gccgataggc gagcttgcgc
     2761 accggcttgg gattgtccgc ccagccgagg aagtggccct cgttgatctc catgtcgaga
     2821 tattcgagcg gccggtagcc cgccggaatg atgcgatagg cgccggagcc cgcgccgttg
     2881 gaggcgagcc aattcttgcc ccagtcgccg tccttctcgt tgggcttgat cgcccgcgga
     2941 ttgacgatgc tgatcgaggg gatcgcggcg aagaacggcg cgtaggacgt ttcgagcttg
     3001 aagcggacca ccagcttctc gagcgccgtc acgttatcgg gcttcag
//
LOCUS       DASWGA010000500         2645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_307611, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000500 DASWGA010000000
VERSION     DASWGA010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2645
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307611"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..809
                     /locus_tag="VF991_11915"
     CDS             <1..809
                     /locus_tag="VF991_11915"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX9557198.1"
                     /translation="FNADGEVIGVNTAIYSPSGTNAGLAFSIPSNLVKQVADQLREFG
                     RVKRGWVGVSYQSVTDDIADSFGLDRARGVLVANVVADGPAAKAGLKRNDIIVSFAGQ
                     EVLDLRRFPRLVANARVGSTIDLVVWRGGKEVPLKLRIGEQEEAEKQNVAAQGGTKKP
                     TEADQPIVSTVEQLGLTLQKVTDQLREKYGLSDQVKGVVVTKVAPNSPAAEKQLQPGD
                     VILEVDQKPVTTPQEVTDIVTKLQQAKKRSVLLFVERQGDPRFAALRLTK"
     gene            complement(917..1918)
                     /locus_tag="VF991_11920"
     CDS             complement(917..1918)
                     /locus_tag="VF991_11920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEX9557199.1"
                     /translation="MTDAVQIVLAKRPVGDVTADCFRQESVNLAVPGDGQVLVKQRFL
                     SLDPYMRPRMTELRSYTPPFEVDKPLTGGSVGEVVDSKNPRFAKGDIVIGVLNWATHT
                     LHDGKGLRKIDPAVAPLSAHLGVLGMPSFTAWYGMKHICKPKAGETVFVSAATGAVGQ
                     VAGQLAKLLGAKVVGCAGDDDKCRWAVREAGYDACFNHKTERDYGAVLDKLCPQGIDA
                     DFENVGGRIFHAVFEQLNNFGRVAFCGAISEYQDAAPMAGPPKMFTIVQRRLTIQGFI
                     VSDHIALMGEFASEVGGLLKDGKLKSRETVVDGLAKAPEAFLGLLRGENFGKLVVRV"
     gene            complement(1915..>2645)
                     /gene="serB"
                     /locus_tag="VF991_11925"
     CDS             complement(1915..>2645)
                     /gene="serB"
                     /locus_tag="VF991_11925"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012651762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEX9557200.1"
                     /translation="DGPADPVAMTAIDAVVVAAAGRRKKLLVADMESTVIENEMLDEL
                     ADFLGLREKIAAITARAMNGEIDFAAALKERVGLLRGLPVAKLDEAACRIRYTPGGAT
                     LVATMKKHGAHCALVSGGFTYFTAMVRRALGFDSDTANGLKHDGHILTGEVEPPILGK
                     EAKLSTLQRLAAQHGLSTGEAVSVGDGANDLPMLQAAGLGVAFRAKPVVAAEVRARID
                     HGDLSALLYLQGYRRSDFVERNEP"
BASE COUNT          458 a          886 c          878 g          423 t
ORIGIN      
        1 tgttcaatgc cgacggcgaa gtgatcggcg tcaataccgc gatctattcg ccatccggca
       61 cgaacgccgg tctcgccttc tcgatcccgt ccaacctcgt caagcaggtc gccgaccagt
      121 tgcgcgagtt cggccgcgtc aagcgcggct gggtcggcgt cagctaccag agcgtcaccg
      181 acgacatcgc cgacagcttc ggcctcgacc gtgcacgcgg cgtgctggtg gccaatgtcg
      241 tggccgacgg gccggccgcc aaggccgggc tgaagcgcaa cgacatcatc gtgagcttcg
      301 ccggccagga ggtgctcgat ctgcgccgct tcccgcggct ggtcgccaat gcccgggtcg
      361 gcagcacgat cgatctggtg gtctggcgcg gcggcaagga agtgccgctg aagctcagga
      421 tcggcgagca ggaggaggcc gagaagcaga acgtggcggc ccagggcggc accaagaagc
      481 cgaccgaggc cgaccagccg atcgtctcga cggtcgagca gctgggcctc accctgcaga
      541 aggtgaccga tcagctgcgc gagaaatacg ggctgtccga tcaggtcaag ggcgtggtcg
      601 tcaccaaggt ggcgcccaac agcccggccg cggaaaagca gctccagccg ggcgacgtca
      661 tcctcgaggt cgaccagaag ccggtcacca ccccgcagga ggtcaccgac atcgtcacca
      721 agctgcagca ggccaagaag cgctcggtcc tgctgttcgt cgagcgccaa ggcgatcccc
      781 gcttcgcggc gttgaggctg acgaagtaag ccgtcgtctc gaccgagggc ctgcggcccg
      841 agcggagaga ccttctatca acacgatagg ccttgcctgt tgaggcaagg cccctcggct
      901 aggctcgggg cgacggttag actcgcacca ccagcttgcc gaaattctcg ccccgcaaga
      961 ggcccaggaa ggcctccggc gccttggcca gcccgtcgac cacggtctcg cggctcttga
     1021 gcttgccgtc cttcaacagg ccgccgacct cgctggcgaa ctcgcccatc aaggcgatgt
     1081 gatcggagac gatgaagcct tggatcgtga gtcgccgctg cacgatggtg aacatcttag
     1141 gcgggcccgc catcggtgcg gcgtcctggt actccgaaat ggcgccgcag aaggcgaccc
     1201 ggccgaaatt gttcagctgc tcgaacaccg cgtggaagat ccggccgccg acattctcga
     1261 aatcggcgtc gatgccttgc gggcaaagct tgtcgagcac cgcgccatag tcgcgctcgg
     1321 tcttgtggtt gaaacaggcg tcgtagcctg cctcgcgcac cgcccagcgg cacttgtcgt
     1381 catcgccggc gcagcccacc accttggcgc ctaaaagctt ggcgagctgg ccggccacct
     1441 ggccgaccgc gccggtggcg gccgagacga acaccgtttc gccggccttg ggcttgcaga
     1501 tgtgtttcat gccgtaccag gcggtgaagg agggcatgcc cagcacgccg agatgggccg
     1561 acaatggcgc aacggcggga tcgatcttgc gcaggccctt gccgtcgtgg agcgtgtggg
     1621 tcgcccagtt cagcacgccg atcacgatgt cgcccttggc gaagcgtgga ttcttcgagt
     1681 ccaccacttc gccgaccgag ccaccggtca agggcttgtc gacctcgaac ggcggcgtgt
     1741 aggagcgcag ctccgtcatg cgcgggcgca tatagggatc gagcgacagg aaacgctgtt
     1801 ttaccagcac ctggccgtcg cccggcaccg cgaggttcac gctttcctgg cgaaaacagt
     1861 ccgcggtgac gtcgcccacc ggacgcttgg cgagcacgat ctggacggca tcggtcatgg
     1921 ctcgttcctt tcgacgaagt cgctgcggcg atagccctgc agataaagca gcgcgctcag
     1981 gtcgccgtgg tcgatgcgtg cccgcacctc ggcggcgacg acgggcttgg cccggaaggc
     2041 gacgcccagg ccggcggcct gcagcatcgg caaatcgttg gcgccatcgc ccacgctcac
     2101 cgcctcgccg gtcgacaggc catgctgggc cgcgaggcgc tgcaaggtcg aaagcttggc
     2161 ctccttgccc aggatcggcg gctcgacctc gccggtcagg atgtggccgt cgtgtttcag
     2221 cccattggcg gtgtcggaat cgaaacccaa cgctcggcgc accatcgcgg tgaaataggt
     2281 gaagccgccc gacaccagcg cgcaatgggc gccgtgcttt ttcatggtgg cgacgagggt
     2341 agcgccgccc ggcgtgtagc gaatgcggca ggcagcctcg tcgagcttgg cgacgggaag
     2401 tccccgcaac aggccgaccc tctccttcag cgcggcggca aaatcgatct cgccgttcat
     2461 ggcgcgcgcc gtgatggcgg cgatcttttc gcgcaagccc aggaagtcgg cgagctcgtc
     2521 cagcatctcg ttctcgatca ccgtcgattc catgtcggcc accaagagct tcttgcgccg
     2581 gccggcggcg gccacgacga cggcgtcgat ggctgtcatg gcgaccggat cggccggccc
     2641 gtcga
//
LOCUS       DASWGA010000501         8677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1071465, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000501 DASWGA010000000
VERSION     DASWGA010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8677
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071465"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..317
                     /locus_tag="VF991_11930"
                     /pseudo
     CDS             240..317
                     /locus_tag="VF991_11930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003529522.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
     gene            complement(461..1312)
                     /locus_tag="VF991_11935"
     CDS             complement(461..1312)
                     /locus_tag="VF991_11935"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX9557201.1"
                     /translation="MSGWKAWLVVPAADRVARERSLEHLAEYGFVVTSREVSRDGPWC
                     IEIFGEGDRSRAAAAVDGDWRWEELPDIDWVAENQRSFRPFAVGPFWVHPSHVSDGRP
                     AGLLPLRIDAGLAFGTGTHATTRGCLKMLATLDPRETANTVDVGCGSGILAIAMARLW
                     QRPVIGGDDDAEAVDVARENAELNGVGDLCRFVHASGLDAPEFKTRAPYDLIVANILA
                     GPLCELSLSFASSLRPGGRVLLSGLLVEQAASLLTAYGRCGFVFERRIDLETGGEWWR
                     TLLLRRT"
     gene            complement(1309..3600)
                     /locus_tag="VF991_11940"
     CDS             complement(1309..3600)
                     /locus_tag="VF991_11940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX9557202.1"
                     /translation="MAPPADPFEITDSVPADPQPARRAIASMAHLDGLNEEQRQAVIH
                     QGGPLLVLAGAGTGKTRVLTTRIAHLLITGRARPSQILAVTFTNKAAREMLDRVAALI
                     GGAADGMWLGTFHAIGVRVLRRHAELVGLKSNFTILDTDDQTRLIKQLLQADNIDDKK
                     WPARVLSGIIQRWKDRALTPDKASGEDAGEFANGRAADIYRQYQARLAEVNAVDFGDL
                     VMHCVSLWQKHPDVLAQYHRRFRHILVDEYQDTNVAQYLWLRLLAQGTEDVCCVGDDD
                     QSIYGWRGAEVGNILRFEKDFPNATIVRLERNYRSTPHILAAASHLISHNEGRLGKTL
                     WTEMKEGERISLRGVWDGDEEARTIGEEIEALQRDKHALSQIAILVRAGFQTREFEER
                     FITMGLPYRVIGGPRFYERQEIRDALAYCRVTVQPDDDLAFERIYNTPRRGLGESALR
                     TLRLIQRAQKISLFEATRRALETDELKGRQRKALGDLIKSFDRWRAMLGGIHHVEVVE
                     TILDESGYTDMLRADRSPEAEGRLENLKELTNALQEFDTLAAFLEHVALLTDNAERSG
                     GDMVSVMTLHAAKGLEFDTVFLPGWEEGLFPNQRALDDKGVAGLEEERRLAYVGLTRA
                     RKRAYVSFAANRRVFNQWQAAIPSRFLRELPTGHLAESSDAGLYATYSAGHHGGLREQ
                     ASGFDYESLGVTSGRRTRWRDETFDDRRAVEGDKVDLSVGQRVFHQKFGYGRIIAVDG
                     NKLDIDFEKAGPKKVLDSFIEAA"
     gene            3703..4692
                     /locus_tag="VF991_11945"
     CDS             3703..4692
                     /locus_tag="VF991_11945"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HEX9557203.1"
                     /translation="MNGAGRIPTGREGVEARLPGVSNLSPAVAGALSAVVGLRTTIPK
                     DRRSAQTLGTEREGHGVLIDDKGLVVTIGYLIMEADTVTITDIDGRELPAYIVGYDYE
                     SGFGLVRTERPIRLKPMPFGDSDTLELRSEAYVAGLGGEKATLKVKVAGRREFAGYWE
                     YLLDNAIFTVPAYPLWGGSALIGQDGALLGIGSLLVHEALGPGAPAFPGNMYVPINRL
                     KPIFGELVANGRLTTPPRPWLGLHTGEYMGQLVVGNISEGGPADRAGLQRGDILHALN
                     GEVLDDVADFYRKLWASGPAGTAVTLRLERDNDSFEVTVRTGDRARYHKYGSD"
     gene            4719..5672
                     /locus_tag="VF991_11950"
     CDS             4719..5672
                     /locus_tag="VF991_11950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007757906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9557204.1"
                     /translation="MARAFASQADVAEKRITFSRLSEHAYAFTAEGDPNTGVVVGDDA
                     VMVIDTQATPKMAQAVIQRSRSVTDKPIRYVVLSHYHAVRVLGATAYEPQHVICSEAT
                     RDMIVERGAQDYKSEVQRFPRLFQAVETIPGLTWPTITFGDRLSIWLGKLQVDIIHAG
                     RGHTKGDTIVWLPEERTLFSGDLVESGATPYAGDAHYKDWPQTLQKLRDFRALALVPG
                     RGDVLVGEEAVEEGIAATQAFLGELYKAVSASALAGESLKQAYDTAMAALQPRYGSWA
                     IFEHCMPFDVSRAYDEAKGLDHPRIWTAERDLEMWAELEQS"
     gene            5751..6509
                     /locus_tag="VF991_11955"
     CDS             5751..6509
                     /locus_tag="VF991_11955"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX9557205.1"
                     /translation="MLKDLLTGRLALVTGAGRGNGAAIARGLAEAGAKVIVTDIEVDA
                     AHALAESIVKAGGEARGHALDVTDHEGCAKLAEDIALLVGPIRILVNNAGIYLRGNML
                     AADGRERWARTMAVNVDGAFNVTMAFADQLRRTHGTVVNVASVNSFTAPAGSGVYPVS
                     KGAIAQFTRALAAELAPDGVRVNAIAPGIIATAMTETTRADPQRLEAFLNHVPMKRVG
                     QPEELIGPVVFLCSDAASYVTGAILAVDGGFLAV"
     gene            6499..6990
                     /locus_tag="VF991_11960"
     CDS             6499..6990
                     /locus_tag="VF991_11960"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9557206.1"
                     /translation="MPSDKSPVIVRPATVDDVELLHRFSVDLATYEDEPDAVASTPQT
                     LARDGFGKDPQFAALIAQRGATPVGFAMYTFNYSVWTAARGIFIEDIWVVPEERRGGV
                     ARLLMQALAQECVANGFRRIDLNVLDWNPARGFYERLGFKWIRNWLPYRLSGEALEKL
                     ARD"
     gene            complement(7095..7610)
                     /locus_tag="VF991_11965"
     CDS             complement(7095..7610)
                     /locus_tag="VF991_11965"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX9557207.1"
                     /translation="MRQSLPYELPELVTRAPFDIHHSTVLPEWVDWNGHMNVAFYVLA
                     FDQASGAFMRNIGLGRPYVDGKLGMTFVLEAHVTYDREMRQGAPMRFVTQLLKRDAKK
                     VHLYHEMFHAAEGYLAATNEVIVMNIDYATRRSAPWPAPAAERLEALWLAHKGLKRPA
                     KAGRVMRLGRR"
     gene            complement(7614..8126)
                     /locus_tag="VF991_11970"
     CDS             complement(7614..8126)
                     /locus_tag="VF991_11970"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX9557208.1"
                     /translation="MKLPPYPMIELDLAAPLDRHRATVLPEWIDWNGHMNVGFYVVAF
                     DKATDTLCAQFGCSWEYTRDKIGMTFVLEAHVTYDQEVKEGDPLRITSQILDHDARRL
                     HFIHAMYHASEGYLAATNELMLMNIDYATRRAAPWPDFALERIEKLAAAHKTLPVPRQ
                     AGRLIGIKKK"
     gene            8260..>8677
                     /locus_tag="VF991_11975"
     CDS             8260..>8677
                     /locus_tag="VF991_11975"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9557209.1"
                     /translation="MAKKTKAVVLGVGAERGLGAAASRRFAKEGHHVLVAGRTTAKVE
                     KVAQSIRANGGSATPLTVDGTKEEEVIALFDKAMADDADGAPADLAVFNMGNNAAVDI
                     REMTAQHFEESWRTGCFAGFLFGREAVRRLDPRGRGT"
BASE COUNT         1376 a         2921 c         2972 g         1408 t
ORIGIN      
        1 tgatgaccca gccgattcgg acctttaagg atctgaccag cgaaactacg ccggcggggg
       61 gaaacaccaa gctcaacctg tcgttcgatg accgccgcct gctcgagatg cgcgctcgcc
      121 acgcgcgcgc cgagctgata gccgatgtcc tgaccgacac catcctgtgg gtgggccgcc
      181 agtggcgccg cctcatcgac gggatcaagg cggacttcaa gctgcgggcc gccgaagccc
      241 agctgctccg catgagcgac cgcgaactgg ccgatctcgg tctgtcccgg tccgacatcc
      301 ccttcgccgt gcgcgaggtc gcgcacggtg tcagccccga gatcggcggc gtcaccgaac
      361 agcccgcgcc ggccaaccag aattggcgcc gcgcggcgta aacgactgta gcgtagcgta
      421 agcgtagagg gccggcgcaa gccggccctt tttcgttggc tcacgtccgc ctcagcagca
      481 gggtgcgcca ccattcgccg ccggtttcta aatcgattcg acgttcgaag acgaagccac
      541 agcggccata ggccgtgagg agagacgccg cctgctcgac cagaagccca ctcagcagca
      601 cccggccgcc cggccgcaac gacgacgcaa acgacagaga gagctcgcag agcggccccg
      661 ccaaaatgtt ggcgacgatc aggtcatagg gcgcgcgcgt tttgaattcc ggcgcgtcga
      721 gcccgctggc gtgcacgaag cggcagagat cgccgacgcc gttcagctcg gcattctcgc
      781 gcgcgacatc gaccgcttcg gcgtcgtcgt cgccgccgat caccgggcgc tgccatagcc
      841 tggccatggc gatggcgagg atgccgctgc cgcagccgac atcgactgta ttggccgtct
      901 cgcgcggatc gagcgtcgcc agcattttta ggcagccgcg cgtcgtggcg tgcgtgccgg
      961 tgccgaaggc gaggccggcg tcgatcctga gcggcaacag gccggccggc ctgccgtcgc
     1021 tgacgtggga cggatggacc cagaatgggc cgacggcgaa cggccggaag gagcgctggt
     1081 tctcggccac ccagtcgata tccggcagct cttcccagcg ccagtcgccg tcgaccgccg
     1141 ccgcggcccg tgacctgtcg ccctcgccga aaatctcgat gcaccatggt ccatcgcggg
     1201 agacttcgcg gctggtgacc acgaagccgt actcggccag gtgctcgagc gagcgttccc
     1261 gggcaacgcg gtcggcggca gggacgacca gccacgcttt ccagccgctc acgccgcctc
     1321 gatgaagctg tccaaaacct tcttcgggcc ggccttctcg aaatcgatat cgagcttgtt
     1381 gccgtcgacc gcgatgatgc ggccgtagcc gaatttctgg tgaaacaccc gctggccgac
     1441 gctgagatcg accttgtcgc cttcgacggc gcggcgatcg tcgaaggtct cgtcgcgcca
     1501 gcgcgtgcgc cggcccgacg tgacgcccag gctctcgtag tcgaagccgc tcgcctgctc
     1561 gcgcaagccg ccgtgatggc cggccgaata ggtggcgtag aggccggcgt cgctgctctc
     1621 ggccagatgg ccggtcggca gctcgcgcag gaaacgcgag gggatggcgg cctgccactg
     1681 gttgaacacc cggcgattgg cggcgaacga cacataggcc cgcttgcgcg cccgcgtcag
     1741 gccgacatag gccagccggc gctcctcctc gagcccggcc acgcccttgt cgtcgagcgc
     1801 gcgctggttg gggaacaggc cttcctccca gcccggcagg aacacggtgt cgaactccag
     1861 gcccttggcg gcgtgcaagg tcatgacgct caccatgtcg ccgcccgagc gctcggcgtt
     1921 gtcggtcaac agcgccacgt gctcgaggaa ggcggccagg gtgtcgaatt cctgcagggc
     1981 gttggtgagc tccttcaggt tctcgagccg gccctcggcc tcgggcgagc ggtcggcgcg
     2041 cagcatgtcg gtatagcccg attcatcgag gatggtttcc accacctcga cgtgatggat
     2101 gccgcccagc atggcccgcc agcggtcgaa gcttttgatc aggtcgccca gtgccttgcg
     2161 ctggcggccc ttcaactcgt cggtctccag cgcccggcgc gtcgcctcga acagcgagat
     2221 cttttgcgcg cgctggatca gccgcaaggt gcgcagggcc gattcgccca ggccgcggcg
     2281 cggcgtgttg tagatgcgct cgaaggccag gtcgtcgtcg ggctgcacgg tgacgcggca
     2341 ataggccagc gcgtcgcgga tctcctggcg ctcgtagaag cgcggcccgc cgatcacgcg
     2401 atagggcagg cccatggtga tgaatcgttc ctcgaactcg cgggtctgga agccggcgcg
     2461 caccaggatg gcgatctggc tcagcgcatg cttgtcgcgc tgcagcgcct cgatctcctc
     2521 gccgatggtg cgcgcctcct cgtcgccgtc ccacacgccg cgcagcgaga tgcgctcgcc
     2581 ttccttcatt tcagtccaca gcgtcttgcc cagccggcct tcgttgtgcg agatcaggtg
     2641 cgaggcggcg gccaggatgt gtggcgtcga gcggtagttg cgctccagcc gcacgatggt
     2701 tgcgttggga aagtccttct cgaagcgcag gatgttgccg acctcggcgc cgcgccagcc
     2761 gtagatcgac tgatcgtcgt cgccgacgca gcacacgtcc tcggtgccct gggcgagcag
     2821 cctgagccac agatactgcg ccacgttggt gtcctggtat tcgtcgacca ggatatggcg
     2881 gaagcggcga tggtactgcg ccagcacgtc ggggtgcttc tgccacagcg acacgcagtg
     2941 catgacgagg tcgccgaaat cgacggcgtt cacctcggcc agccgcgcct ggtactggcg
     3001 gtagatgtcg gcggcgcggc cgttggcgaa ctcgccggca tcctcgcccg acgccttgtc
     3061 gggggtgagc gcgcggtcct tccagcgctg gatgatgccc gacagcaccc gggccggcca
     3121 tttcttgtcg tcgatgttat cggcctgcaa gagctgcttg atcaggcgcg tctggtcgtc
     3181 ggtgtcgagg atggtgaaat tgctcttcag cccgaccagc tcggcgtggc ggcgcagcac
     3241 gcgcacgccg atggcgtgga aggtgccgag ccacatgccg tcggccgcgc cgccgatcag
     3301 ggcggcgaca cggtcgagca tttcgcgcgc cgccttgttg gtgaaggtga cggccaggat
     3361 ctgcgagggt cgcgcacggc ccgtgatcaa aaggtgggcg atgcgggtgg tcagcacgcg
     3421 ggtcttgccg gtgccggccc cggccagcac cagcagcggc ccgccctggt ggataaccgc
     3481 ctggcgctgc tcctcgttca ggccgtcgag atgggccatg gacgcgatgg cgcggcgcgc
     3541 tggctggggg tcggccggca ctgagtcggt gatttcaaac ggatcggcgg ggggcgccat
     3601 gtagcgtcat atagcaatcg gagcggcaga cgcctatctt tccgggggga gcgcgcgtca
     3661 gcgtggcgtg gaggtatacc gatggcccga gggaacggtt ccatgaacgg cgcaggtcgt
     3721 attccgaccg gccgggaagg cgtcgaggcg cggctgcccg gcgtttccaa tctgtcgccc
     3781 gcggtcgccg gcgcgctgtc cgccgtggtc ggcctgcgca ccaccatccc caaggaccgc
     3841 cggtccgccc agacgctggg caccgagcgc gagggccatg gcgtgctgat cgacgataag
     3901 ggcctggtcg tcaccatcgg ctacctgatc atggaagccg acaccgtcac catcaccgac
     3961 atcgatggcc gcgagctgcc ggcctatatc gtcggctacg actacgagag cggcttcggc
     4021 ctggtgcgca ccgagcgtcc gatccgcctg aaaccgatgc cgttcggcga ttccgatacg
     4081 ctcgagctgc gcagcgaggc ctatgtcgcc gggctgggcg gcgagaaggc cacgctcaag
     4141 gtcaaggtcg ccggccggcg cgagttcgcg ggctactggg agtatcttct ggacaacgcg
     4201 atcttcacgg tgccggccta tcccctgtgg ggcggctcgg cgctgatcgg ccaggacggc
     4261 gcgctgctcg gcatcggctc gctgctggtg cacgaggcgc tcggcccggg cgcgccggcc
     4321 ttccccggca acatgtacgt gccgatcaat cgcctgaaac cgatcttcgg cgagctggtg
     4381 gccaacggcc ggctgacgac gccgcccagg ccgtggctcg gcctccacac gggcgagtat
     4441 atgggccagc tggtggtcgg caatatctcc gagggcggtc cggccgaccg cgccggcctg
     4501 cagcgcggcg acatcctgca tgccctgaac ggcgaggtgc tggacgacgt cgccgacttc
     4561 tatcgcaagc tgtgggcgag cggcccggcc ggcacggcgg tgacgctgcg cctggagcgc
     4621 gacaacgatt ccttcgaggt cacggtgcgc accggcgatc gcgcgcgtta ccacaagtac
     4681 ggctccgact gacgctgcga gaaacgggag agacgtcgat ggccagggcc ttcgcctcgc
     4741 aggcggacgt ggcggaaaag aggatcacgt tcagccggct gtccgagcac gcctatgcct
     4801 tcaccgccga gggcgacccc aacaccggcg tcgtggtcgg cgacgatgcg gtcatggtga
     4861 tcgacaccca ggcgacgccc aagatggcgc aggcggtgat ccagcgcagc cgcagcgtca
     4921 ccgacaagcc gatcaggtac gtggtgctgt cgcactacca cgcggtgcgc gtgctgggcg
     4981 ccacggccta cgagccgcag cacgtcattt gcagcgaagc gacgcgcgac atgatcgtcg
     5041 agcgcggcgc gcaggactac aagtccgagg tccagcgctt cccgcgcctg ttccaggcgg
     5101 tcgagaccat tcccggcctg acctggccca ccatcacctt cggcgaccgc ctgtcgatct
     5161 ggctgggcaa gctgcaggtc gacatcatcc atgccgggcg cggccacacc aagggcgaca
     5221 ccatcgtctg gctgcccgag gagcgcaccc tgttcagcgg cgacctggtc gaatcaggcg
     5281 ccacgcccta cgccggcgac gcccattaca aggactggcc gcagacgctg cagaagcttc
     5341 gcgatttccg ggcgctggcg ctggtgcccg ggcgcggcga cgtgctggtc ggcgaggaag
     5401 cggtcgagga gggcatcgcc gccacccagg ccttcctcgg cgagctttac aaggcggtgt
     5461 cggcgagcgc gctggccggc gagtcgctga agcaggctta cgacacggcg atggccgcgc
     5521 tgcagccgcg ttacggcagc tgggcgatct tcgagcactg catgccgttc gacgtgtcgc
     5581 gcgcctacga cgaggccaag ggcctcgacc atccgcgcat ctggaccgcc gaacgcgacc
     5641 tcgaaatgtg ggcggagctg gagcaatcat gagcgtcttt gctgggaacg cgccacgcca
     5701 gtggcgcgtt cttctgcaaa gcatgagcgc cactcagcca tgatgagacc atgctgaaag
     5761 acctcctcac cggacgcctg gcgctggtca ccggcgccgg ccgcggcaat ggtgccgcca
     5821 tcgcgcgcgg cctcgccgag gccggcgcca aggtgatcgt gaccgacatc gaggtcgatg
     5881 ccgcccatgc cctggccgag agcatcgtca aggcgggcgg cgaggcgcgc ggccatgcgc
     5941 tcgatgtcac cgaccacgag ggctgcgcca agctcgccga ggacatcgcc ctgttggtcg
     6001 ggccgatccg catcctggtc aacaatgccg gcatctatct gcgcggcaac atgctggcgg
     6061 ccgacggccg cgagcgctgg gccaggacca tggcggtcaa tgtcgacggc gccttcaacg
     6121 tcaccatggc ctttgccgac cagctcaggc gcacccacgg caccgtggtc aacgtcgcct
     6181 cggtgaactc cttcaccgcg cccgccggca gcggcgtcta tcccgtctcc aagggcgcca
     6241 tcgcccagtt cacgcgggca ctcgccgccg agctggcgcc cgacggggtg cgggtgaacg
     6301 ccatcgcgcc cggcatcatc gccaccgcca tgaccgagac gacgcgggcc gatccccagc
     6361 ggctggaggc ctttctcaac catgtgccga tgaagcgcgt cggccagccc gaggagctta
     6421 taggcccggt cgtcttccta tgctccgacg cggcgagcta cgtgaccggc gccatcctgg
     6481 cggtcgatgg aggctttctt gccgtctgac aaatcgccgg tcattgtccg gccggcgaca
     6541 gtcgacgacg tcgagttgct gcatcgcttc tcggtcgatc tcgcgaccta cgaggacgaa
     6601 cccgacgccg tcgcctcgac gccgcagacc ctggcgcgtg acggtttcgg caaggacccg
     6661 caattcgccg ccctgattgc ccaacgcggg gccacgccgg tgggctttgc gatgtacacc
     6721 ttcaactatt cggtctggac cgccgcgcgc ggcatcttca tcgaggacat ctgggtggtg
     6781 cccgaggagc ggcgtggcgg cgtggctcgc ctgttgatgc aggcgctggc gcaggagtgc
     6841 gtggccaacg gttttaggcg catcgacctc aacgtgctcg actggaaccc ggcgcgcggc
     6901 ttctacgagc gcctcggctt caaatggatc cgcaactggc tgccctatcg gctgagcggc
     6961 gaggccttgg agaagctggc tcgcgactag ctgggcgcgc gccactgcgc gcggagtatc
     7021 tccgcgctga agtggcgcga tcttctcagg tcgtagaccc tgacgcgcga ctggagtcgt
     7081 gcgcccccag ctattcacct cctccccaac cgcatgaccc ttcccgcctt ggccggccgc
     7141 ttcaggccct tgtgcgccag ccacaacgcc tccagccgtt cggccgccgg ggcgggccac
     7201 ggcgccgaac ggcgcgtggc gtagtcgatg ttcatgacga tcacctcgtt ggtcgcggcg
     7261 aggtagccct cagcggcatg aaacatctcg tgatagagat ggaccttctt ggcgtcgcgc
     7321 ttgagaagtt gtgtaacgaa gcgcatcggc gcgccttgcc gcatctcgcg gtcgtaggtg
     7381 acgtgggcct ccagcacgaa ggtcatgccg agcttgccgt cgacgtaggg acggccgagc
     7441 ccgatgttgc gcatgaaggc gcccgacgcc tggtcgaagg ccagcacata gaaggcgacg
     7501 ttcatgtggc cgttccagtc gacccactcc ggcagcacgg tcgaatgatg gatgtcgaat
     7561 ggcgcccgcg tcaccagctc gggcagctcg taaggcagcg actgtcgcat gatctatttc
     7621 ttcttgatgc cgatcaggcg gccggcctgc ctgggcaccg gcagcgtctt gtgcgcggcc
     7681 gcgagcttct cgatgcgctc cagggcgaag tcgggccacg gcgcggcgcg tcgcgtcgcg
     7741 tagtcgatgt tcatgagcat cagctcgttg gtggcggcga gatagccttc gctcgcgtgg
     7801 tacatggcgt ggatgaagtg caggcgcctg gcgtcgtggt cgaggatctg gctggtgatg
     7861 cgcagcggat cgccctcctt gacctcctgg tcgtaggtga cgtgcgcctc cagcacgaag
     7921 gtcatgccga tcttgtctcg cgtgtattcc cagctgcagc cgaactgcgc gcacagcgtg
     7981 tcggtcgcct tgtcgaaggc cacgacatag aagccgacgt tcatgtggcc gttccagtcg
     8041 atccactccg gcagcacggt ggcgcggtgg cggtcgagcg gggcggcgag atcgagttcg
     8101 atcatggggt acggaggtaa tttcatgcgg gcggaccgta gcgaagccgg cggccgcacc
     8161 gcaagtttcg cgcaccccct ccgcccttcg ggcacctccc ccatctcagc gccttctgag
     8221 gcgcgcatgg gggaggcggg gagggggaag aggatcgaca tggcgaagaa gaccaaggcc
     8281 gtcgtgctgg gcgtcggcgc cgaacgcgga ctgggcgcgg ccgccagccg ccgctttgcg
     8341 aaagagggcc atcatgtgct ggtggccggc cgcaccacgg ccaaggtcga gaaagtggcg
     8401 caatcgatcc gtgccaacgg cggttcggcg acgccgctca ccgtcgacgg caccaaggaa
     8461 gaagaggtca tcgccctgtt cgacaaggcg atggccgacg atgccgacgg cgcgccggcc
     8521 gacttggccg tgttcaacat gggcaacaac gccgccgtcg atatccgcga gatgacggcg
     8581 cagcatttcg aggaatcctg gcggactggc tgcttcgccg gcttcctgtt cggccgcgag
     8641 gcggtacgac gtctggaccc gcgcggtcgc ggcacgc
//
LOCUS       DASWGA010000502         1874 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_59089, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000502 DASWGA010000000
VERSION     DASWGA010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59089"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(25..738)
                     /locus_tag="VF991_11980"
     CDS             complement(25..738)
                     /locus_tag="VF991_11980"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9557210.1"
                     /translation="MKGAEFDRHAATYDGGLDNPVKRLMGRSADQFIAVKARWLLRRE
                     PGLRTGGLAVLDYGCGAGDLLRVLAGLGARAAFTGCDVSAGMLAEAGKRWPASLGPAP
                     ALVAQDGSRTPFADRQFDIVTISAVLHHVPVAERAAVYRELGRVLKPGGRIYVFEHNP
                     RNPLVRYVIARTPIDENAILLDEAEVRHGLLDSAHYDIASDYLMFMPPGITFLGWLDR
                     LLAWLPLGAQYVVAARKSA"
     gene            complement(735..1694)
                     /locus_tag="VF991_11985"
     CDS             complement(735..1694)
                     /locus_tag="VF991_11985"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX9557211.1"
                     /translation="MNLTARPALSVVAPCYDEQDALPEFVRRVGAVLDGLGGSSEIVL
                     VDDGSRDRTWQVMTDAAAKDPRIVAVRLMRNHGHQLALTAGLTVCRGERILIIDADLQ
                     DPPELLADMMVLMDGADGKGGADVVYGQRRQREGDSLFKRATAAAFYRLIGRLTDVQI
                     PLDAGDFRLITRRVLDLLIAMPERHRFIRGMVAWIGGKQVPLVYDRQARVAGESKYPL
                     AKMVRFAADAITAFSVVPLMASMTIGWVMAVIGFAFFIYSIVGWLLGANLPGWTSLMA
                     AVGLLGGMQFLMLGIIGAYLGRLYDQSKGRPLFMIRDIVGGPK"
BASE COUNT          326 a          638 c          638 g          272 t
ORIGIN      
        1 ctgtcggtcc atagcccctc tccctcaggc gctcttgcgc gccgccacga catattgcgc
       61 tccgagcggc agccacgcca gaaggcgatc gagccaaccc agaaatgtga tgcccggcgg
      121 catgaacatc aggtaatccg aggcgatgtc gtaatgcgcc gaatcgagca ggccgtgccg
      181 cacctccgcc tcgtcgagca ggatggcgtt ctcgtcgatc ggcgtgcggg cgatgacgta
      241 gcggaccagc ggattgcgcg gattgtgctc gaaaacatag atccggccgc ccggcttcag
      301 gacccggccg agctcgcgat agaccgccgc ccgttcggcg accggcacgt ggtgcagcac
      361 ggcgctgatg gtgacgatgt cgaactggcg gtcggcgaag ggcgtgcgcg agccgtcctg
      421 ggccaccagc gccggcgcgg ggccgaggga agccggccag cgcttgccgg cttcggccag
      481 catgccggcc gagacatcgc agccggtgaa ggcagcccgc gcgcccaggc ccgccagcac
      541 gcgcaaaaga tcgccggcgc cgcagccata gtcgagcacg gcaaggccgc cggtcctgag
      601 gccgggctcg cggcgcaaca gccagcgcgc cttgacggcg atgaactggt cggccgaacg
      661 gcccatcagg cgcttgacgg gattgtcgag gccgccgtcg taggtcgcgg cgtggcggtc
      721 gaattcggcc cccttcattt cggcccgccg acgatgtcgc ggatcatgaa caggggccgg
      781 cccttgctct ggtcgtagag ccggccgaga taggcgccga tgatgcccag catcaggaat
      841 tgcatgccgc ctaaaagccc gacggcggcc atcagcgagg tccagccggg caggtttgca
      901 ccgagcagcc agccgacgat cgaatagatg aagaaggcga agccgatcac cgccatcacc
      961 cagccgatgg tcatcgaggc catcagcggc accaccgaaa aggcggtgat ggcatcggcg
     1021 gcgaagcgca ccatcttggc cagcgggtac ttgctctcgc ccgccacccg cgcctggcgg
     1081 tcgtagacca gcggcacctg cttgccgccg atccacgcca ccatgccgcg gatgaagcgg
     1141 tggcgctcgg gcatggcgat cagcagatcg agtacgcggc gcgtgatcag tcggaagtcg
     1201 ccggcgtcga gcggaatttg gacgtcggtc agccggccga tcaggcgata gaaggcggcc
     1261 gccgtcgccc gcttgaacag gctgtcgccc tcgcgctggc ggcgctggcc atagaccacg
     1321 tcggcgcccc ccttgccatc ggcgccgtcc atcagcacca tcatgtcggc caacagctcg
     1381 ggcggatcct ggaggtctgc atcgatgatc aggatgcgct cgccgcggca cacggtgagg
     1441 ccggcggtga gcgcgagctg atggccgtgg ttgcgcatca gccgcaccgc gacgatgcgc
     1501 ggatccttgg ccgccgcgtc ggtcatgacc tgccaggttc gatcgcgcga gccgtcgtcg
     1561 accagcacga tctcactgct gccgcccagg ccgtccagca cggcgccgac gcggcgcacg
     1621 aactcgggca gggcatcctg ctcatcgtag caaggggcca ccacggaaag cgccgggcga
     1681 gcagtaaggt tcatgcccgc gagcaataac cgttgtttct ggcccccgct acacgtcttt
     1741 cctcccccgt catacgggtc tgcgttttgg ccgctccgca gccaaaacgc ataggtgccc
     1801 ccggcgcgcc tcagaaggcg cggagggggc ggagggggac ggcctcagag gcgatttcca
     1861 tgatttaatg atct
//
LOCUS       DASWGA010000503         5228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2334320, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000503 DASWGA010000000
VERSION     DASWGA010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5228
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2334320"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..424
                     /locus_tag="VF991_11990"
     CDS             <1..424
                     /locus_tag="VF991_11990"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9557212.1"
                     /translation="KFLGDGILASFGAVAPSTTAAADALRAADAVIEAADRWAAERTA
                     AGRQPLSIGLAVASGRVVFGAVGDAERLEFTVIGDAVNFAAKLEKHNKDEHTRALVDG
                     STYAKAEQQGYIAPARRERRPGRKVGGVADLVDIVVLA"
     gene            506..1243
                     /locus_tag="VF991_11995"
     CDS             506..1243
                     /locus_tag="VF991_11995"
                     /inference="COORDINATES: protein motif:HMM:NF033779.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44/TimA family putative adaptor protein"
                     /protein_id="HEX9557213.1"
                     /translation="MGNNYDIILIGLVAVFLILRLRSVLGKRTGSERPPTRDPFTPPA
                     PPTAAPRVGDAPSGGQSGNDNIVPLPTASAPPPRPSLATTGPGGIRATVLPTASPGVA
                     AIRAADPSFEPTGFSAGARAAFTTIVEAFARSDTAVLRPLLDGPTYASFEAAIRGRAE
                     RKEKAETTLIGFEASDIAAAELQGTTATVTVRFVSEQINVVRNADGQIIDGNPNEVQK
                     VIDLWTFRRDTKSSDPNWLLVKTESEG"
     gene            1263..2366
                     /locus_tag="VF991_12000"
     CDS             1263..2366
                     /locus_tag="VF991_12000"
                     /inference="COORDINATES: protein motif:HMM:NF015523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HEX9557214.1"
                     /translation="MRWTVLPGGAACLAAAGLLAACASGMGGSSEQRVAMAPIAFNEI
                     AGWNEDKQSEALAAFRRSCPKLSVGPETRIATDGGTKTVTPAEWKRICDAAGAVNAGD
                     DRAARAFFEENFRPLVVKAPGRFTGYFEPEMRGSRVPSRLFTVPVYRRPTDLTDQPYY
                     TRAEIEQGVLKGKGLEIAWVQDPVALFEVQVQGSGRVHLAEGGVLSLAFDGSNNRPYT
                     AIGGVLVEMGVMRKEAVTWPAIRDWLKRNPQQARDVMRKNERYIFFKDSKSPSASGSE
                     GVTLTAQRSLAVDITFTPYGTPIWLDTVRPVARKPGTNEPYRRLTIAQDTGTAIQGPA
                     RGDVFFGGGAQAADWAGRMVSEGRAIVLVPNKS"
     gene            complement(2381..3217)
                     /locus_tag="VF991_12005"
     CDS             complement(2381..3217)
                     /locus_tag="VF991_12005"
                     /inference="COORDINATES: protein motif:HMM:NF042560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6675 family protein"
                     /protein_id="HEX9557215.1"
                     /translation="MDTTGRLAAAKIRRNPSPAVPLPEVLRLLLFLLLLLAPDISRSA
                     GAPMRPPCGEPPIPAYAPPGQPPLTDVWSESELRRSGWFAPDCLNWGASRTRLVAALA
                     GQFQFAGPADELIARIGRISGLKTVRYWSVTHKAWQPLVSDAGVLEDPQGKARPDINP
                     SELVPGRSLFYFEMSQTGRTVYRLTVTARTPERIVVATENVTPIHFGILTAFEPAAMQ
                     TVIFLDKRGPGLWGYYQTIRATAGASALALGSDASYVNRLAALYRYVAGIPTDQEPPL
                     AR"
     gene            3210..4007
                     /locus_tag="VF991_12010"
     CDS             3210..4007
                     /locus_tag="VF991_12010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEX9557216.1"
                     /translation="MSKSPSGSSAPRRRVALFVTCLVDLFRPSVGFAAVKLLEDAGCT
                     VDIPPLQVCCGQPAYNSGDRATTRAIARQVIDAFAGYEAVVAPSGSCGGMLSHHYPGL
                     FDDDPAMKARAQDLASRSYELMSFLVDVLGVAKVAARYDGAVTYHDSCSGLRELGVKT
                     QPRRLLASVEGLSLHEMKTPEVCCGFGGTFCVKYPEISNAMVGEKSADITAAGADTLL
                     AGDLGCLMNMAGKLQREGRAVRVRHVAEVLAGMGDRPGIGEPDQGRR"
     gene            4007..>5228
                     /locus_tag="VF991_12015"
     CDS             4007..>5228
                     /locus_tag="VF991_12015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HEX9557217.1"
                     /translation="MQSTAHDFKDNVGVALADANLQDSLAKLKVGFSERRREAAERLP
                     EFEALRDCARDIKNHALENLDFYLEEFERKVTALGGHVHWAPTAEDARRIIGELCQSM
                     GARTVAKSKSMVAEEIALNDHLESLGIAPIETDLGEYIIQLRHEPPSHIIAPAVHLTK
                     DQVADTFFEHHRKLGFTRRLSERNDLVAEARHVLRQKFLDADVGLTGANFLVAETGSS
                     MLVTNEGNADLSNTLPRMHIVLASIEKVIPTLEDAAVLLRVLARSATGQESSAYTTLN
                     TGPKRPGDLDGPEHYHVVILDNGRSAVLGTEMQDMLRCIRCGACMNHCPVYGAIGGHA
                     YGWVYPGPIGAVLTPQLIGVEEAANLPNASTFCGRCESVCPVRIPLPRLMRHWREREF
                     ERHLTPRTVRQGLAL"
BASE COUNT          875 a         1783 c         1759 g          811 t
ORIGIN      
        1 caaattcctg ggcgacggca tcctggcgtc gttcggtgcg gtggcaccct cgaccacggc
       61 ggccgccgac gcgctgcgtg cggccgacgc ggtgatcgag gcggccgacc gctgggccgc
      121 cgagcgcacg gcggcgggcc gtcaaccgct gtcgattggg ctcgccgtgg cgtccgggcg
      181 cgtcgtgttc ggcgcggtgg gcgacgccga aaggctggaa ttcacggtca tcggcgacgc
      241 ggtcaatttc gcggcaaaac tcgaaaagca taacaaggat gaacacaccc gagccctggt
      301 cgacggcagc acctatgcca aggccgagca acagggctac atcgcacccg caaggcgcga
      361 acgccgcccg ggacgtaagg tgggtggcgt cgccgattta gtcgatattg tggtcttggc
      421 gtagcgtcgc cgtcgccttg ccctttggcc atcggcggcc tatgtaattc gcagcgagcg
      481 gggaacgggc tggcggagcg ccatcgtggg taacaactac gacatcatcc tcatcgggct
      541 ggtcgcggtc tttctgatcc tgcgactgcg ctccgtgctc ggcaagcgca ccggcagcga
      601 acgtccgccg acgcgcgatc ctttcacgcc gcccgcgcca ccgacggctg cgccgcgggt
      661 cggcgatgcg ccttccggcg gacagtccgg caacgacaat atcgtgccgc tgccgaccgc
      721 cagtgcgccg ccgccgcgcc cttcgctggc gacgaccgga ccgggcggca ttcgcgcgac
      781 cgtcttgccg acggcaagcc ccggcgttgc cgccattcgc gccgccgatc cgagcttcga
      841 gccgacgggt ttcagcgccg gcgcgcgggc cgccttcacc accatcgtcg aggccttcgc
      901 ccggagcgac acggctgtgc tgcgtccgct gctcgacggc ccgacctatg ccagtttcga
      961 ggccgccatc cgcggccgcg ccgagcgcaa ggagaaggcc gagacaacct tgatcggctt
     1021 cgaagcctcc gacatcgccg ccgccgaatt gcagggaacc accgcgacgg tcaccgtccg
     1081 ctttgtcagc gagcagatca acgtcgtgcg caatgccgac ggccagatca tcgacggcaa
     1141 ccccaacgag gtgcaaaagg tcatcgatct ctggacgttc cgtcgcgaca ccaagtccag
     1201 cgatcccaac tggctgctgg taaaaactga aagcgaaggc tgagagggag ggctttccca
     1261 agatgcgctg gactgtgctg cccggcggcg cggcctgcct tgccgccgcc ggtcttctgg
     1321 ctgcgtgcgc cagcggcatg ggcggctcgt ccgagcagcg ggtggcgatg gcgccgatcg
     1381 cgttcaacga gatcgccggc tggaacgaag acaaacagag tgaagccctc gccgctttcc
     1441 gccgttcctg ccccaaactg agcgtgggac ccgagaccag gatcgccacc gacggcggca
     1501 ccaagaccgt cacgccggcg gagtggaagc ggatctgcga cgcggccggc gcggtgaacg
     1561 ccggcgacga tcgcgccgcg cgggcgttct tcgaggagaa cttccggccg ctggtggtca
     1621 aggcgccggg caggttcacc ggctatttcg agcccgagat gcgcggcagc cgcgtgccgt
     1681 cgcgcctgtt caccgtgccg gtctatcggc ggccaaccga tctcaccgac caaccctact
     1741 acacgcgcgc cgagatcgag cagggcgtgc tcaagggcaa ggggctggag atcgcctggg
     1801 tgcaggatcc ggtggccctg ttcgaagtcc aggtgcaggg cagcggccgc gtccatctcg
     1861 ccgaaggcgg cgtgctgagc ctcgccttcg acggctccaa caaccggccc tacaccgcga
     1921 tcggcggcgt gctggtcgag atgggcgtga tgcgcaagga ggccgtgacc tggccggcga
     1981 tccgcgactg gctaaaacgc aacccgcagc aggcgcgcga cgtgatgcgc aagaacgagc
     2041 gctacatctt cttcaaggac agcaagagcc cgagcgccag cggctcggaa ggcgtgacgc
     2101 tgacggcgca gcgcagcctc gccgtcgaca tcaccttcac gccctacggc acgccgatct
     2161 ggctcgatac ggtgcggccg gtggcgcgca agcccggcac caacgagccc taccgtcggc
     2221 tgaccatcgc ccaggacacc ggcacggcga tccaggggcc ggcccgcggc gacgtgttct
     2281 tcggcggcgg cgcgcaggcg gccgactggg ccggccgcat ggtcagcgaa ggccgggcca
     2341 tcgtgctggt gcccaacaag agctgatcag cgcgcggcca ctaacgagcc aagggtggtt
     2401 cctggtcggt cgggatgccg gcaacatagc gataaagcgc ggccaggcga ttgacgtagg
     2461 aagcatcgct gcccaacgcg agggcgctgg cgcccgcggt cgcgcggatc gtctgataat
     2521 aaccccacag cccgggaccg cgcttgtcga ggaagatcac cgtctgcatg gcggcgggct
     2581 cgaaggcggt gaggatgccg aagtggatcg gtgtgacgtt ctcggtcgcc acgacaatcc
     2641 gctccggcgt gcgcgccgtc acggtcaggc gatagacggt acggccggtt tggctcatct
     2701 cgaaatagaa caacgaacga ccgggcacga gttcggaagg gttgatgtcc ggccgggctt
     2761 tgccctgcgg gtcctcgagc acgcccgcgt cggagaccag cggctgccac gccttgtggg
     2821 tcaccgacca gtagcggacc gtcttcagcc ctgaaatccg cccgatccgc gcaatgagct
     2881 catccgccgg gccggcgaat tggaattgcc cggccaaggc ggcgacgagg cgggtcctgc
     2941 tggcccccca attcaggcaa tcaggggcga accagcccga ccggcgcagc tccgattcgc
     3001 tccagacgtc agtcagggga ggttgtccgg gcggcgcata ggccggaatg gggggctcgc
     3061 cgcacggcgg tctcataggg gcgccggcgc ttcgcgagat atcgggcgcc agcagcagca
     3121 gtagaaaaag caggaggcgc agcacctcgg gcaacgggac ggccggcgac gggttgcgcc
     3181 ggattttcgc cgctgccaat ctgcccgtcg tgtccaagtc gccttctggt tcgagtgctc
     3241 cgcggcgccg cgtcgcgctt ttcgtcacgt gcctggttga cctgtttcgg ccgtcggtcg
     3301 gttttgccgc tgtaaagctc ctcgaggatg cgggctgcac ggtcgacatc ccgccgctcc
     3361 aggtgtgctg cggccagccg gcctacaatt ccggcgatcg cgccacgacg cgggccatcg
     3421 cccggcaggt catcgatgcc ttcgcaggct atgaggcggt cgtcgctccg tcgggttcgt
     3481 gcggcgggat gctgagccac cactatccag ggttgttcga cgacgatccc gcgatgaagg
     3541 cgcgggccca ggatctcgcc agccgcagct acgagttgat gtcgttcctg gtcgatgtgc
     3601 tgggcgtcgc caaagtcgcg gctcgctatg acggcgctgt cacctatcac gactcctgct
     3661 cgggcctgcg cgagctcggc gtcaagacgc agccgcgccg tctgctggcc tcggtcgagg
     3721 gattgagcct gcacgagatg aagacgccgg aagtgtgctg cggcttcggc ggcaccttct
     3781 gcgtcaaata tcccgagata tccaatgcca tggtcggcga aaaatccgcc gacatcaccg
     3841 ccgccggcgc cgatacgctg ctggcgggcg acctcggctg cctgatgaac atggcgggca
     3901 agctgcagcg tgaaggccgg gctgtgcgcg tgcgccatgt cgccgaagtg ctggccggca
     3961 tgggtgatcg gccgggaata ggcgagcccg atcagggccg gcgctgatgc agtccaccgc
     4021 ccacgacttc aaggacaatg tcggggtcgc cctggccgat gccaacctgc aggattcgct
     4081 ggccaagctg aaagtgggtt tctccgagcg ccgccgcgaa gccgccgagc gcctgcctga
     4141 attcgaggcc ctgcgcgatt gtgcccgcga catcaagaat catgcgcttg aaaacctcga
     4201 tttctacctc gaggagttcg agcgcaaggt gacggcgctg ggcggccacg ttcactgggc
     4261 accgaccgcc gaggatgcgc gccgcatcat cggcgagctc tgccagagca tgggcgcgcg
     4321 aacggtcgcc aagtcgaagt cgatggtagc cgaggagatc gccctcaacg atcatctgga
     4381 gtcgctcggc atcgcgccga tcgagaccga tctcggcgaa tacatcatcc agcttcgcca
     4441 cgagccgccc agccacatca tcgcgcccgc cgtccatctc accaaggacc aggtggccga
     4501 caccttcttc gagcatcacc gcaagctcgg cttcacccgg cggctcagcg agcgcaacga
     4561 cctggtcgcc gaggcgcgcc acgtcctgcg ccagaaattt ctcgacgccg atgtcggcct
     4621 gaccggcgcc aacttcctgg tcgccgagac cggctcgtcg atgctggtga ccaacgaggg
     4681 caacgccgat ctctccaaca ccctgccgcg catgcacatc gtgcttgcca gcatcgagaa
     4741 ggtgatcccg acgctggagg atgccgccgt cctgctgcgc gtgctggcgc gttcggccac
     4801 gggacaggaa tcctcggcct acacgaccct caacaccggg ccgaagcggc cgggcgatct
     4861 cgacggaccc gagcactatc acgtcgtcat cctcgacaat ggccgttccg cggtcttggg
     4921 caccgagatg caggacatgc tgcgctgcat ccgctgcggt gcctgcatga accattgccc
     4981 cgtctatggc gccatcggcg gccatgccta tggctgggtc tatcccggcc cgatcggcgc
     5041 cgtgctgacg ccgcagctga tcggcgtcga ggaagcagcc aacctgccca acgcctcgac
     5101 gttctgcggc cgctgcgaga gcgtttgtcc ggtgcgcatc ccgctgcccc gcctgatgcg
     5161 ccactggcgc gagcgcgagt tcgagcgcca tctcacgccc cggacggtgc ggcagggcct
     5221 cgccttgt
//
LOCUS       DASWGA010000504         2210 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_434393, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000504 DASWGA010000000
VERSION     DASWGA010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434393"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1999
                     /locus_tag="VF991_12020"
     CDS             <1..1999
                     /locus_tag="VF991_12020"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9557218.1"
                     /translation="LGLLIAGGAGALLARRMVVPIRTLQTGAERIGGGELGHRLAIKT
                     GDELEALADQFNRSAAALEESYASLERKVEERTAELRETLEQQTATAEVLQAISRSPT
                     DVQPVLEVVAAAAGRFCGATDVIITLRDGDDMRTVAHNGPLEAPVGYLGPLDRTRITG
                     RCIIEGRRIHLPEIDRLDPTEYATTLELARQHNFKAALAAPMLREASAIGSILLRKQE
                     TGAFTPRQIELLETFAAQAVIAIENVRLFTELRETLDQQTATAEVLRVISQSPTDVQP
                     VLDAVVSAARRFCGAEDASIALLEGNEFTVAAHDGVLASTVGSRRPINRQTGVGRAIL
                     DGRTGHYPDVEALDPDEFATARALGRQHSFRAALVAPMMREGLAIGSIGLRKLEAGPF
                     TARQIALLETFAAQAVIAIANVRLFTEIQEKSRQLEVASQHKSQFLANMSHELRTPLN
                     AIIGYTEMMADGLYGEVGDKAQGVLERVQNNGRHLLGLINDVLDLSKIEAGQLTLTVE
                     QYSVADMVATVLSATESLARAKGLKLESAVPPGLPTGSGDARRLTQVLLNLVGNAIKF
                     TDQGSVEVRAEQADNRFELSVVDTGFGIAPADQARIFDEFQQVDNTSTRKKGGTGLGL
                     SISRKIVELHGGRITVESEMGKGSIFKVTVPVNVAPVKDAA"
     gene            1996..>2210
                     /locus_tag="VF991_12025"
     CDS             1996..>2210
                     /locus_tag="VF991_12025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003562240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9557219.1"
                     /translation="MSKKILVVEDTEDNRQILRDLLGMAGYEMIEAHDGAEGVAQATE
                     HRPDLILMDIQMPVMDGYEATRRIKADP"
BASE COUNT          402 a          748 c          741 g          319 t
ORIGIN      
        1 gctcggcctg ctgatcgcgg gcggcgccgg cgcgctgctg gcgcggcgca tggtggtgcc
       61 aatccgcacc ctgcagaccg gcgccgagcg catcggcggc ggcgagcttg gccatcgcct
      121 ggccatcaag accggcgacg agctggaggc gctggccgac cagttcaacc gctcggcggc
      181 ggccctcgag gagtcctatg ccagcctcga gcggaaggtg gaggagcgaa ccgccgagct
      241 gcgcgaaacg ctcgagcagc agaccgcgac ggccgaggtg ctgcaggcga tctcgcgctc
      301 cccgacggac gtgcaaccgg tgctcgaagt cgtagcggcg gcggccggcc gcttctgcgg
      361 cgcgaccgac gtgatcatca ctttgcgcga cggcgacgac atgcggaccg tagcgcataa
      421 tgggccgctc gaggctccgg tcggctacct cgggccgctt gaccggacgc gcatcaccgg
      481 acgctgcatc atcgaaggcc gcagaatcca tctgcccgag atcgaccgcc ttgatccgac
      541 cgagtacgca acgacgctcg agcttgcccg ccagcacaac ttcaaggcgg cacttgcagc
      601 gccgatgctg cgcgaggcga gtgccatcgg gagcatcctg cttcgcaagc aagaaaccgg
      661 cgccttcacg ccacgccaga tcgaactttt ggaaaccttc gcggcgcagg ccgtgatcgc
      721 catcgagaac gtgcgcctgt tcaccgagct gcgcgaaacg ctggaccaac agacggcgac
      781 ggccgaggtg ctgcgtgtca tttcccagtc gccgaccgac gtgcagcccg tgctcgacgc
      841 ggtggtttcg gcggcgcgcc ggttctgtgg cgcggaggac gcctcgatcg ccttgctcga
      901 gggcaacgag ttcacggtcg ccgcccacga cggcgtcctt gcatcgaccg tcggcagccg
      961 ccgcccgatc aaccggcaaa ccggcgtggg acgcgccatc ctggacggcc gcacggggca
     1021 ctatccggat gtcgaggcgc tcgatccgga cgagttcgcg acggcgcgcg cgctgggccg
     1081 ccagcacagc ttccgcgccg ccctggtcgc gccgatgatg cgcgaggggc tggccatcgg
     1141 ctcgatcggc ctgcgcaagc tcgaggcagg cccgttcacg gcgcgtcaga ttgccctcct
     1201 ggagaccttc gccgcgcagg ccgtcatcgc gatcgcgaac gtgcgcctgt tcaccgagat
     1261 ccaggagaag agccgccagc tcgaagtggc gagccagcac aagtcgcaat tcctcgccaa
     1321 tatgagccac gagctgcgca cgcccttgaa cgccatcatc ggctacaccg aaatgatggc
     1381 cgacggactc tacggcgaag tgggcgacaa ggcgcagggt gtgctggagc gcgtgcagaa
     1441 caacggccgt cacctgctcg gactgatcaa cgacgtgctc gacctctcca agatcgaggc
     1501 gggtcaactc accttgacgg tcgagcagta cagcgtcgcc gacatggtgg cgacggtgct
     1561 ttcggccacc gagtcgctgg cccgcgccaa ggggctgaag ctcgagtcag ccgtgccgcc
     1621 tggcctgccg accggcagcg gcgacgcgcg gcgcctcact caagtgctgc tgaacctggt
     1681 gggcaacgcc atcaagttca ccgaccaggg atcggtcgag gtccgcgccg aacaggccga
     1741 caaccgtttc gagctgtcgg tggtcgatac cggcttcggc attgcccccg ccgatcaggc
     1801 gcgcatcttc gacgaattcc agcaggtcga caacacgagc acgcgcaaga aaggcggcac
     1861 cggcctcggc ctgtcgatct cgcgcaagat tgtcgagctg catggcgggc gcatcacggt
     1921 cgagtccgaa atgggcaagg gctcgatctt caaggtcacc gttccggtca acgtcgcacc
     1981 ggtcaaggat gctgcatgag caagaaaata ctcgtcgtcg aggacaccga ggacaatcgc
     2041 cagatcctgc gcgatctcct gggtatggcc gggtacgaaa tgatcgaggc gcacgacggc
     2101 gccgaagggg tcgcccaggc gaccgagcac aggccggacc tgatcctgat ggacatccag
     2161 atgccggtga tggacggcta tgaggcgacg cggcgcatca aggccgaccc
//
LOCUS       DASWGA010000505         2111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1445791, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000505 DASWGA010000000
VERSION     DASWGA010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445791"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..474)
                     /locus_tag="VF991_12030"
     CDS             complement(<1..474)
                     /locus_tag="VF991_12030"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9557220.1"
                     /translation="MRMKDKVALISGAASGMGAATARLLAREGAKAVVVADLLDKEGE
                     AVVAGIKQAGGKAVYIHLDVTDEAQWKAAIDKTVSDHGGLDVLVNNAGISGSAEQDLY
                     DTAAWNRLMGINATGVFLGMKHGIAAMKKGGRRGSVINLSSVSGIVGQANIHVGYN"
     gene            complement(491..808)
                     /locus_tag="VF991_12035"
     CDS             complement(491..808)
                     /locus_tag="VF991_12035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007696212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEX9557221.1"
                     /translation="MAWLYLVLAGICEIGWPVGLKLGWTDQGARPWWIVFAIVAMSAS
                     GALLLWAQRFIPMGTAYAVWTGIGAVGAFVVGIAAFGDSASTMRLVSIALIVAGIIGL
                     KIA"
     gene            945..>2111
                     /locus_tag="VF991_12040"
     CDS             945..>2111
                     /locus_tag="VF991_12040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9557222.1"
                     /translation="MNERELRRLIGEVKVGRLSRRSFVQRMAAVGLAAPLATQLLAYS
                     GVAMAQSRPPYKPTKRGGGGLLKVLWWQGATLLNPHFAVGTKDQDGSRFFYEPLAGWD
                     ADGNLVPVLAASIPGREDGTLAADGKSVTWKLKQSVTWHDGKPFTADDVVFNWQYASD
                     PATAATTSAVYKDVKAEKVDTHTVKVMFDKPTPFWALAFVGAQGMIVPKHLYADYIGD
                     KSRDAPTNLKPIGTGPYKFKDFKPGDMVSGEINPNYHMENRPYFDAFEMKGGGDAVSA
                     ARAVLQTGEFDFAWNMQVEDEILQRLEKGGKGRVSISPGGNIEHIQLNTTDPWTEVDG
                     ERASLKTKHPTLSDPAVRQALSVLVDKDSVEKFIYGRTGNATANFVNNPERFRSK"
BASE COUNT          387 a          696 c          670 g          358 t
ORIGIN      
        1 attgtagccg acatggatgt tggcctggcc gacgatgccg gagaccgacg acaggttgat
       61 caccgagccg cgccggccgc ctttcttcat cgccgcgatg ccgtgcttca tgccgaggaa
      121 gacgccggtg gcgttgatgc ccatcagccg gttccaggcg gcggtgtcat aaaggtcctg
      181 ctccgccgag cccgagatgc cggcgttgtt caccaggacg tcgagcccgc catggtcgga
      241 aacggtcttg tcgatcgcgg ccttccattg ggcttcgtcg gtgacgtcga gatggatgta
      301 gacggccttg ccgcccgcct gcttgatgcc ggcgacgacc gcctcgcctt ccttgtccaa
      361 aaggtcggcc acgaccacgg ccttggcgcc ttcgcgggct aacaggcggg cggtggcggc
      421 ccccatgccg ctcgccgcgc cgctgatcag ggcgaccttg tccttcatgc gcatggtatg
      481 tgctccttcc tcaggcgatc ttgaggccga tgatgccggc cacgatcagg gcgatcgaga
      541 ccaggcgcat ggtcgatgcg gaatcgccga aggcggcgat gccgaccacg aaggcgccga
      601 ccgcgccgat gccggtccat accgcatacg ccgtccccat gggaatgaag cgctgtgccc
      661 acaaaagcag cgcgccgctt gccgacatgg caacgatggc gaacacgatc caccacggcc
      721 gagcgccctg gtcggtccag ccgagcttca gcccgaccgg ccagccgatc tcgcaaattc
      781 cggccagcac aaggtacagc caagccatct ccccctccgt cgcccgccac cgcgccgtcg
      841 ttgacgacgg ctggccggcc tgttctgatt aagacttgca cgcatcttgc tggatagcga
      901 gagcgtcggg tgggaatggc ctcagggggt aatgggagcg tgtcatgaat gaacgtgaat
      961 tgcgccgtct tatcggcgag gtgaaggtcg gcaggctttc gcgacggagc ttcgtgcaac
     1021 gcatggcggc ggtcgggctc gccgcgccgc tggccactca gcttctggcc tattcgggcg
     1081 tggcgatggc ccaatcgagg ccgccctaca agccgaccaa gcgcggcggc ggcggccttc
     1141 tcaaggtgct gtggtggcag ggcgcgaccc tgctcaatcc tcatttcgcg gtcggcacta
     1201 aggaccagga cggttcgcgc ttcttctacg agccgctggc cggctgggat gccgacggaa
     1261 atctcgtgcc tgtgctggcg gcctccatcc ccggccgcga ggacggcacc ctggcggccg
     1321 acggcaagtc ggtgacctgg aagctgaagc agagcgtgac ctggcacgac ggcaagccgt
     1381 tcactgccga cgacgtggtc ttcaactggc aatacgccag cgatccggcg acagctgcga
     1441 ccaccagtgc cgtctacaag gacgtcaaag ccgagaaagt cgacacccac accgtcaagg
     1501 tgatgttcga caagccgacg ccattctggg cgctggcctt tgtcggcgcc cagggcatga
     1561 tcgtccccaa gcacctctat gccgactata ttggcgacaa gtcgcgcgat gcgccgacca
     1621 atctcaagcc gatcggcacc ggcccctaca agttcaagga cttcaagccc ggcgacatgg
     1681 tgtcgggcga gatcaatccc aactaccaca tggagaaccg gccctatttc gatgccttcg
     1741 agatgaaggg tggcggcgat gcagtttcgg ccgcgcgcgc cgtcctgcag accggcgagt
     1801 tcgactttgc ctggaacatg caggtcgagg acgaaatcct ccagcgcctg gagaagggcg
     1861 gcaaggggcg tgtctccatc tcgccgggcg gcaacatcga gcacatccag ctcaacacca
     1921 ctgacccatg gacggaggtt gacggcgagc gcgccagcct caagaccaag cacccgactc
     1981 tgtccgatcc ggcggtgcgc caggcgctgt cggtgctggt cgacaaggat tcggtcgaaa
     2041 aattcatcta tggccgcact ggcaacgcca cggcgaactt cgtcaacaat ccggagcgct
     2101 tccgttccaa g
//
LOCUS       DASWGA010000506         4047 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_571440, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000506 DASWGA010000000
VERSION     DASWGA010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4047
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_571440"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            189..1316
                     /gene="dnaJ"
                     /locus_tag="VF991_12045"
     CDS             189..1316
                     /gene="dnaJ"
                     /locus_tag="VF991_12045"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEX9557223.1"
                     /translation="MSQDYYELLGVSRTAGAEDIKKAFRKLAMQHHPDRNPGDKGSEK
                     KFKDLTHAYDILKDPEKRAAYDRYGPAAFEGGAGPGGPGGPFHGQGFDFGTVFGDIFE
                     EMFGANGARGRGGRGDTRGQDLRFNLEITLEQAYAGTEATVRVPSSVACEVCHGSGAE
                     PGSKPQQCQTCHGRGRIRAQQGFFTVERTCPACHGVGHVIDKPCRSCAGQGRVRRDKT
                     LKVNIPAGVEDGTRIRLSGEGEAGTRGGPAGDLYVFLSVRHHQLFEREGADVHCRVPI
                     SMVQATLGGNIDVPTLDGKMARINIPAGAQGGHQFRLRGKGMPIVRSAQRGDMYIEIN
                     VETPTNLTSKQKELLKEFEKAGKTSPESEGFFSKVKEMFGG"
     gene            complement(1408..2370)
                     /locus_tag="VF991_12050"
     CDS             complement(1408..2370)
                     /locus_tag="VF991_12050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557224.1"
                     /translation="MSNLLQVRDLHVTFVTPDRTVHAVNGVSFDLERGETLGILGESG
                     SGKSVTLRSILRLHPEHRTRWSGSIRMEGDEVLEMGPRALGDLRGGRVAMIFQEPATA
                     FDPVFTVGHQIAETIRRHTGKSETDAWKRARELLELVRIPSPVQRLKAYPHEMSGGMR
                     QRAMIALALSCNPSLLLADEPTTALDATVQIQVLLLIRELQREFDLGVIFVTHDIGVA
                     VEVSDRIGVMYAGKIVELAPVEQMVDAPQHPYSQGLLASTVHDGMRGRRLEAIPGAPP
                     DLGEVPTGCSFAPRCRFVRPDCVAQPPDLKPTSDSHLVRCVLAA"
     gene            complement(2372..3400)
                     /locus_tag="VF991_12055"
     CDS             complement(2372..3400)
                     /locus_tag="VF991_12055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9557225.1"
                     /translation="MDSVIAVADRGGPVQPLLLARGLRKHFPVGGGLLGRGRKVVRAV
                     DDLTLSVAKGETLGVVGESGCGKSTVARLLIRLLRPDSGTMVLDGDPVDEPHGITVNE
                     LRRQVQMVFQDSYASLNPRLTIAETLAFAPKAHGLPAAEARARVRDLLAKVGLDPDNY
                     ADRYPHELSGGQRQRVNIGRALALRPRLVILDEAVSALDKSVEAQVLNMLVDLKAELG
                     LTYVFISHDLNVVQYLSDRVLVMYLGKVVELGPVEAIYGDPQHPYTRALLSARPSMDP
                     RRRTHEAPIQGDPPNPIDPPSGCRFRTRCPFAEEVCARVEPPLTETGRQEVACHMRVA
                     GSGHSKAV"
     gene            complement(3402..>4047)
                     /locus_tag="VF991_12060"
     CDS             complement(3402..>4047)
                     /locus_tag="VF991_12060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007688925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557226.1"
                     /translation="ELGRDMFARLIYGGRLSLFMGVTPVACALLIGGLLGITAGFLGG
                     RVNMLIMRIMDVFYAFPSVLLAISLSGAMGAGAENTLLALTLVFIPPVCRVSESVTTQ
                     VRGFDFVDAARASGAATFTIVRVHVLGNVLGPILVYATSLISVAIILAAGLSFLGLGV
                     KPPEPEWGLMLNTLRQAIYVNPVLAALPGVMIFITSICFNLMSDGLRAAMDVKA"
BASE COUNT          751 a         1350 c         1386 g          560 t
ORIGIN      
        1 ccggcgggtc gggcggcgcc gccaacgagg cgaagaacga gaaggtcgtc gacgccgagt
       61 tcgaggacgt caccgacaag aacaagaaga caggctccgg ctgagccgga acaacaacca
      121 agcaagcggc ctcccgcgca agcgggaggc cgtcctgtaa gcggcaagtg ggggctgcgt
      181 agagcgttat gtcgcaagac tattacgagc tgctcggagt gagccgcacc gcaggcgccg
      241 aggacatcaa gaaggcgttc cgtaagcttg ccatgcagca tcacccggac cgcaatccgg
      301 gcgacaaagg ctccgagaag aaattcaagg acctcaccca cgcctacgac atcctgaagg
      361 atcccgagaa acgcgcggcc tacgatcgct acggaccggc cgccttcgag ggcggcgccg
      421 gacccggcgg accgggcggg ccgttccacg gccagggctt cgatttcggc accgtgttcg
      481 gcgacatctt cgaggagatg ttcggcgcca acggcgcgcg tgggcgcggc ggacgcggcg
      541 acacgcgtgg ccaggatctg cgcttcaatc tggagatcac gctcgagcag gcctatgccg
      601 gcaccgaagc cacggtgcgc gtgccaagct cggtagcctg cgaggtctgc cacggcagcg
      661 gcgcggagcc gggctcaaag ccgcagcagt gccagacctg tcacggccgt ggccggatca
      721 gggcccagca gggcttcttc accgtcgagc gcacctgtcc tgcctgccat ggcgtcggcc
      781 atgtgatcga caagccgtgc cgcagctgcg ccggccaagg ccgggtgcgt cgcgacaaga
      841 cgttgaaggt caacatcccg gccggtgtcg aggacggcac gcgcatcagg ctctcaggcg
      901 aaggcgaggc gggaacgcgc ggcgggccgg cgggcgatct ctacgtcttc ctctcggtgc
      961 gccaccatca gctgttcgag cgcgagggcg ccgacgtcca ttgccgcgtg ccgatctcca
     1021 tggtgcaggc cacgctcgga ggcaacatcg acgtgccgac gctggacggc aagatggcgc
     1081 gcatcaacat tccggccggc gctcaaggcg gccaccagtt ccgcttgcgc ggcaagggca
     1141 tgccgatcgt gcgctccgcc cagcgcggcg acatgtacat cgagatcaac gtcgagacgc
     1201 cgaccaacct cacgtccaag cagaaggagc tgctcaagga attcgagaag gccggcaaga
     1261 ccagccccga atccgaaggc ttcttcagca aggtgaagga gatgttcggc ggttaactca
     1321 ttgctgggag cgcgccactc cagtggcgct catcggcagt gtgatcgaca aagatgcgcc
     1381 acggagtggc gcgctcccag caaagaccta agcggccagc acgcaacgca ccaggtggct
     1441 gtcgctcgtg ggcttcaggt cgggcggttg ggcgacgcaa tcgggcctca cgaaccggca
     1501 gcgcggcgcg aagctgcagc cggtggggac ctcgccaaga tcgggcggcg cgccggggat
     1561 cgcctccagc cgccggccgc gcatgccgtc gtgcaccgtc gaggcgagca ggccctggct
     1621 gtagggatgc tgcggcgcat cgaccatctg ctcgaccggc gccagctcga cgatcttgcc
     1681 ggcatacatg acgccgatgc ggtcggagac ttcgaccgcc acgccgatat cgtgggtgac
     1741 gaagatgacg ccgaggtcga actcgcgctg cagctcccgg atcagcagaa gcacctgaat
     1801 ctgcacagtt gcgtcgagcg ccgtggtcgg ctcgtcggcc aacagcaggc tgggattgca
     1861 cgacagggcc agcgcgatca tggcgcgctg gcgcatgccg cccgacatct catgcggata
     1921 ggcttttagc cgctgcaccg gcgaggggat gcgcaccagc tccaaaagct cgcgggcgcg
     1981 cttccaggcg tcggtctcgc tcttgccggt gtggcggcgt atcgtctcgg cgatctggtg
     2041 gccgaccgtg aagaccggat cgaacgccgt cgctggctcc tggaagatca tggccacccg
     2101 cccgccgcgc aggtcgccca gggcgcgcgg gcccatctcc agcacctcgt cgccctccat
     2161 gcggatgctg cccgaccagc gcgtgcggtg ctccggatga aggcgcagga tcgagcgcag
     2221 ggtgacgctc ttgcccgagc ccgattcgcc caaaatgccg agcgtctcgc cgcgctcgag
     2281 gtcgaagctg acgccgttca ccgcgtgcac ggtgcggtcg ggcgtgacga aggtgacgtg
     2341 aaggtcgcgg acctgcagca gattgctcat gtcaaaccgc cttcgaatgg cccgaacccg
     2401 ccacccgcat gtggcaggcg acctcctgcc ggccggtctc ggtgagcggc ggctcgaccc
     2461 gggcacagac ctcctcggcg aaggggcagc gcgtgcgaaa gcggcagccc gacggcggat
     2521 cgatgggatt gggcggatcg ccctgaatgg gcgcctcgtg ggtacgccgg cgcgggtcca
     2581 tcgacggccg cgccgacaag agcgcacgcg tatagggatg ctgcggatcg ccgtagatcg
     2641 cctcgaccgg gcccagctcg acgaccttgc cgagatacat caccaggacg cggtcgctga
     2701 gatactgcac gacgttgagg tcgtggctga tgaagacgta ggtcagtccc agctcggcct
     2761 tgaggtcgac cagcatgttc aggacctgcg cctcgaccga cttgtcgagc gccgacaccg
     2821 cctcatcgag gatgaccagc cgtggccgga gcgccagcgc gcggccaatg ttcacccgct
     2881 ggcgctgacc gcccgacagc tcgtgcggat agcggtcggc gtagttgtcc ggatcgagcc
     2941 cgaccttggc cagaagatcg cgcacgcggg cgcgcgcttc cgcggcgggc agcccatggg
     3001 ccttgggcgc gaaggccagc gtctcggcga tcgtcaggcg gggattgagc gaggcgtagg
     3061 aatcctggaa caccatctgc acctggcggc gcagctcgtt caccgtgatg ccgtgcggtt
     3121 cgtcgacggg atcgccatcg agcaccatgg tgccgctgtc cggccgcagc aggcggatca
     3181 gcaggcgggc caccgtcgac ttgccgcagc ccgactcgcc caccacgccc agggtctcgc
     3241 ccttggccac cgacagggtg aggtcgtcga cggcgcgcac aaccttccgc ccgcgcccca
     3301 acaagccacc gcccaccggg aagtgcttgc gcaagccacg cgccagcagc aggggttgaa
     3361 caggtccgcc gcgatccgcg acggcgatca cagagtccat gtcaggcctt cacgtccatg
     3421 gccgcgcgca agccatcgct catcagattg aagcagatcg aggtgatgaa gatcatcacg
     3481 ccgggcaggg cagccagcac gggattgacg tagatcgcct ggcgcagcgt gttcagcatc
     3541 aggccccatt ccggctcggg cggcttgacg cccaggccaa ggaaggaaag accggccgcc
     3601 aggatgatcg ccacgctgat cagcgacgtg gcatagacca ggatcggtcc cagcacgttg
     3661 ccaagcacgt gcacgcgcac gatggtgaac gtcgccgcgc cgcttgcccg cgcggcatcg
     3721 acgaaatcga agccgcgcac ctgggtggtc acgctttccg agacgcggca gaccggcggg
     3781 atgaagacca gggtaagcgc cagcagcgtg ttctccgcac cggcgcccat ggcgcccgac
     3841 agcgagatcg ccagcagcac ggacggaaag gcgtagaaca cgtccatgat gcgcatgatc
     3901 agcatgttca cgcggccgcc caagaagccc gcggtgatgc ctaaaaggcc gccgatcaag
     3961 agtgcgcagg cgaccggcgt cacgcccatg aagagggaca ggcggccgcc atagatcagt
     4021 cgggcgaaca tgtcgcggcc gagctcg
//
LOCUS       DASWGA010000507         1582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1071656, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000507 DASWGA010000000
VERSION     DASWGA010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071656"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VF991_12065"
     CDS             <1..298
                     /locus_tag="VF991_12065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011424843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX9557227.1"
                     /translation="RGELEITDVNAHYLKQGRLTVEKLGRGYAWLDTGTPSSLLRAAQ
                     FVETVEDRQGLQIGSPEEVAWRKGYIDDAGLARLIEPIKQSEYGKYLQLILARG"
     gene            393..467
                     /locus_tag="VF991_12070"
     tRNA            393..467
                     /locus_tag="VF991_12070"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:425..427,aa:Gly,seq:gcc)
     gene            complement(586..822)
                     /locus_tag="VF991_12075"
                     /pseudo
     CDS             complement(586..822)
                     /locus_tag="VF991_12075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013897057.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
     gene            complement(819..>1582)
                     /locus_tag="VF991_12080"
     CDS             complement(819..>1582)
                     /locus_tag="VF991_12080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557228.1"
                     /translation="LRDQSLSLPRPDGRLDVESLTLVAPGSSKPLLRGVSFDLEPGEV
                     LGVIGPSGAGKSTLARQLVGVLAPSAGVVRLDGADVSQWALGGLGQHVGYLPQDIELF
                     SDTVAANINRFQPGDDDATIRAAKLAGMHDLILRLPQGYDTPVGEGGAVLSGGYRQRV
                     ALARAVYGDPSLVVLDEPSSNLDADGDSALTNCVRELKQRGVTVVIISHRPATIGVAD
                     KVLVLKDGAVELFGPRGEVLTRLTRGPQLQTVRSA"
BASE COUNT          269 a          542 c          535 g          236 t
ORIGIN      
        1 gcgcggcgag ctcgagatca ccgacgtcaa cgcacactac ctcaagcagg gccgcctcac
       61 ggtcgagaag ttgggccgtg gctatgcctg gctcgacacc ggcacgccgt cgagcctctt
      121 gcgcgccgcg cagttcgtcg aaacggtcga ggaccgccag ggcctgcaga tcggcagccc
      181 cgaggaggtc gcctggcgca agggctatat cgatgatgca ggcctcgcgc ggctgatcga
      241 gccgatcaag caaagcgagt acggcaagta cctgcagctc attttggcgc gtggctgaga
      301 cgcaccggaa gcccaggctt ccggcgcttg caaagggagc cgaaaagccc tatcaacgcc
      361 gccttccggc acctacccag ccggatcgga gcgcgggcgt agctcagggg tagagcacga
      421 ccttgccaag gtcggggtcg agggttcgaa tcccttcgcc cgctccaatt tcagcaaatg
      481 ttcatggacg aagtcgcgcc gccttacgca gggctgcgtt gattcgcgac ggccagccgg
      541 gctatcggca cgaaaatggg cgagcgagaa ggctgtgcgg ctttccgcct tgacgcggtc
      601 gccctccttg acgcgcagtt ccttgacgat gccgccgtcg aggtgctgca cgctcttgcg
      661 gttgccgtcg accttgacca cgccgttggc gaccaccgcg ccgttgagcg gcgcggtgcc
      721 cccccagata cccaggccgc cgaagaacaa ggcgatgatc agccagccgg caaaggcggg
      781 ccgccggctt gaatcgctcg gagcttggat atcgtcgatc atgccgatct caccgtttga
      841 agttgcggac cgcgggtcag ccgcgtcagg acctcgccgc gcggaccgaa cagctcgacc
      901 gcgccgtcct tcagcaccag gaccttgtcg gcgacgccga tcgtcgccgg ccggtgcgag
      961 atgatcacga cggtcacgcc gcgctgcttg agctcgcgaa cgcaattggt gagggcgctg
     1021 tcgccgtcgg cgtcgaggtt ggagctcggt tcgtcgagca cgaccaggct cggatcgcca
     1081 tagaccgcac gggccagcgc cacgcgctga cgatagccgc cggacagcac cgcgccgcct
     1141 tcaccgaccg gcgtgtcgta gccttgcggc aggcgcagga tcaaatcgtg catgccggcc
     1201 agcttcgccg cccggatggt cgcgtcgtcg tcgcccggct ggaaccggtt gatgttggcg
     1261 gcaaccgtgt cggagaacag ctcgatatcc tgcggcagat agccgacgtg ctgaccgagg
     1321 ccgcccagcg cccactggct gacatcggcg ccgtcgaggc gcacgacgcc cgcgctcggc
     1381 gccagcaccc caaccagttg gcgcgccagc gtcgacttgc cggcgccgga cgggccgatc
     1441 acgccgagaa cctcgcccgg ctcgagatcg aaggagacgc cgcgcagcag cggcttggac
     1501 gagcccggcg cgaccagggt caggctttcg acgtcgaggc gtccgtcggg ccgcggcagc
     1561 gacaggctct ggtcgcgcag cg
//
LOCUS       DASWGA010000508         7698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_692189, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000508 DASWGA010000000
VERSION     DASWGA010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7698
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692189"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..894
                     /locus_tag="VF991_12085"
     CDS             <1..894
                     /locus_tag="VF991_12085"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9557229.1"
                     /translation="ADVKFRLGIDYESLKKVNPRIVLGSISGFGQDGPYAERAGFDQI
                     AQGMGGMMWVTGMPGGGPVRAGIAVADVGAGLHCAIGILTALLEREVSGQGQWISTSL
                     LQAMISMCDFQAARWTIAKDVPGQAGNNHPTSIPTGVFKTKDGYINIAASGGHIYKRF
                     CECIKAPELMTDERFSTDKARRTNRDVLNAEIDKRVATYNSAELVEKLNKAGVPAGPI
                     YKMDEMFADPQVKHLKMAHPVKSPKLGDTELIGQAINMSRTPFEMRWATPEQGEHTEA
                     VLKEAGYDAAAIASFRQRGVI"
     gene            1002..1796
                     /locus_tag="VF991_12090"
     CDS             1002..1796
                     /locus_tag="VF991_12090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX9557230.1"
                     /translation="MISPTPNMIAEKKGPVGRIVFNKPAKHNATSSDMWEAIPVILDD
                     FEKDPAIRVVVVTGAGDKAFVSGADISEFEKARSTPEQIAYYDKIGEVANARLAKCSK
                     PTIARIRGYCVGGGVAVSLTCDIRIASDNCKFGVPAAKLGLGYRAAGIKTLMDVVGPA
                     YAKEIFFTGRLFSAAEVLGMGLINRVVPDAELDAYVDNYCTLIGGNAPLTMHAAKRTV
                     EELTRLDGKPDLGRTATLVKECFASEDYIEGRRAFMEKRKPQFKGR"
     gene            complement(1867..2724)
                     /locus_tag="VF991_12095"
     CDS             complement(1867..2724)
                     /locus_tag="VF991_12095"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HEX9557231.1"
                     /translation="MSRHVVCLTFDHDHLSGFIARGLASPTAISRGEYDMVVIPRLVA
                     LLGRYDIKATFFTPGHTIDSTPEAVTPYVEAGHELAHHGWTHRLPVSLSREEEEEEIV
                     RGNESIKKISGRTARGYRSPAWDLSPHSIELLLKQGILYDSSLMGHDYDCYFARQGDV
                     AELKKPFVRGRETSLVEMPISWSLDDFPHFEYMRNPNGSIQAGLMNATNVLENFVDDF
                     TYMTRVAPDFGILTYTFHPHVIGRGHRMMMLERLIQKLIEGGAVFTTMEAAMHEWLSR
                     RQVGRKAAE"
     gene            2843..3667
                     /locus_tag="VF991_12100"
     CDS             2843..3667
                     /locus_tag="VF991_12100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008191173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557232.1"
                     /translation="MVGASARRVVAREGDNQLVVEGVSKRFGGVTAVQDVSLDVPTGS
                     ILSIIGPNGAGKTSLLNMISGFYKPDSGRILLEGRDITQRKPSDIAALGIARTFQNIA
                     LFSGLTVLDNLMLGRHVRMKAGVLASVVYWGMAQKEDIAHRAAVEEIIEFLKLQDLRK
                     LPTAALAYGLRKRVELGRALAVEPKVLLLDEPMGGMNQDEKEDMARYILDVNQERGVT
                     VVLIEHDMGVVMDISDRVVVLDRGRRIAAGTPEEVQRDPAVIEAYLGTAAKRGGRA"
     gene            3664..5604
                     /locus_tag="VF991_12105"
     CDS             3664..5604
                     /locus_tag="VF991_12105"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9557233.1"
                     /translation="MSLADHDKTSTLPKLLQRNAEQDPKAAGIREKTRGVWQTYSWSA
                     YRDNVRDFALGLAALGFKRGDKLSVVGDNRPQLYFAQLSAQVLGGVSVPVYQDSIAAE
                     LVYVLNHAETAIIVAEDQEQVDKALSLKAQLPKLRWIVFDDPRGLAFYDDPILRSFES
                     VQAEGRTFGQAHPGFYEAELAKGATDDTAMIAYTSGTTGSPKGVMLSHRNMIATAAAF
                     VEVNEVKPGDNWLSYLPMAWVGDAAFTLGMALVAKLTANCPENPETVQRDLRELGPDA
                     MLAPPRIWENMLTLMQIKGSDASPLKRGVFGYFRGLAERCELKRSDGKDLSLADRLGL
                     ALGEILVYGPVRDQLGLGKARWCYTGGAPLGPDTYRFFRSFGINLKQVYGATEASALI
                     ACQADAEANPNTVGRPIPRVEVKIDDRGEVMLRGANVFMGYYKQEEVTRDTLTPDGWL
                     KTGDAGFFDKQGHLVIIDRAKDVGKLTDGSAFAPQFIENKLKFSPFIREAVAFGDQRP
                     FVVAMIAIDAQTVGTWAEKQGLAYTSFMDLSRKPEVAGLIGAEIAKANASLPDIQQVK
                     RYLLLTKELEADDAEMTRTRKVRRRFVAEKYASVIDAFYGGKESADVTVEITFEDGRK
                     SVLNSTIAIHGKAAAEPARRAA"
     gene            5654..6550
                     /locus_tag="VF991_12110"
     CDS             5654..6550
                     /locus_tag="VF991_12110"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557234.1"
                     /translation="MSEDMEFLLAMVLSGASIGLMYSLIALGFVLVYKATDAINFAQG
                     EFVMLAGLILVAVLGFEGAPLIAAIVVVLAAMIGFGFGLERIVLRPLLGRPVVAVIMA
                     TIGLAAIIRGLGPVIFGKEVRSVALPIGDDPIVLGPANLPPIQVLGAVVAIAFFLGFT
                     WFFKKSRMGVAMRAVADSQQVAQAMGINVERYFALAWAMAGVVSALGGIVWGAMLGVD
                     VQLALVGLKVFPVVILGGLDSVGGALVGGLIIGIVESLAAGYLDPYVGGGTKDFAPYV
                     LMILMLMIRPYGIFGRRQIERV"
     gene            6554..7621
                     /locus_tag="VF991_12115"
     CDS             6554..7621
                     /locus_tag="VF991_12115"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557235.1"
                     /translation="MFHRESGVFKTTYAADMALYPLPIAKWTVIALAALFVLIIPLTV
                     HEYYLSILNLIFIAIVGALGLNILVGYTGQISIGHGAFMSVGAYTAANLAVRLGLPFW
                     LTLPAGGLMAALIGVIVGMPSLRIKGLYLAIATLAGQLIIEWTINHVPAISGGAQASI
                     EVDRPSLFGFSFATQGHLYFFLLFFAVLAIVATLNLVRSRIGRAFVAVRDQDIAAEII
                     GINIYRYKLLAFAISSFYAGVCGVLYTYYFGIANYEQFQLVVSIDYLAMIIIGGLGSV
                     LGSILGAIFVTLLPIAIRIFMEDVGALFFSSAEMANVISGLRLGVFGGLIIFFLIVEP
                     EGLNRLWRNIRSYFRVWPFSY"
BASE COUNT         1317 a         2476 c         2541 g         1364 t
ORIGIN      
        1 gccgacgtga agttccggct cggtatcgat tacgagagcc tgaagaaggt gaatccgcgc
       61 atcgtgctgg gctcgatttc cggctttggc caggacgggc cctacgccga gcgcgccggc
      121 ttcgaccaga tcgcccaggg catgggcggc atgatgtggg tcaccggcat gccgggcggc
      181 ggtccggtgc gcgccggcat cgccgtggcc gatgtgggcg ccggactgca ttgcgccatc
      241 ggcatcctga cggcgctgct ggagcgcgaa gtctccggcc aggggcagtg gatctcgacc
      301 tcgctcttgc aggccatgat ctcgatgtgc gacttccagg cggcgcgctg gaccatcgcc
      361 aaggacgtgc cgggccaggc cggcaacaac catccgacct cgattccgac cggcgtgttc
      421 aagaccaagg acggttatat caacatcgcg gcctccggtg gccacatcta caagcgcttc
      481 tgcgaatgca taaaagcgcc cgagctgatg accgatgagc ggttctcgac cgacaaggcg
      541 cgccgcacca accgcgacgt gctgaatgcc gagatcgaca agcgcgtggc gacctacaac
      601 agcgccgagc tggtggagaa gctgaacaag gccggcgttc cggccggacc gatctacaag
      661 atggacgaga tgttcgccga cccgcaggtc aagcacctca agatggccca tccggtgaag
      721 tcgcccaagc tcggcgacac cgagctcata ggccaggcga tcaacatgag ccgcacgccg
      781 ttcgagatgc gctgggcgac gcccgagcag ggcgagcaca ccgaggcggt gctgaaggag
      841 gctggctacg atgccgcggc gatcgccagc ttccgccagc gcggcgtgat ttagcgctgg
      901 gggcgcgtga ctccagtcgt gcgtcttctc atgctctttt ggaccggaaa aaccaagatc
      961 gcgccactgg agtggcgcgc ccccagcatg aggaggaatg catgatcagt ccgacgccca
     1021 acatgatcgc ggagaagaag ggtccggtcg gccggatcgt cttcaacaag ccggccaagc
     1081 acaacgcgac ctcgtccgac atgtgggagg cgatcccggt cattctcgac gacttcgaga
     1141 aggatccggc gattcgcgtc gtcgtggtga ccggcgcggg cgacaaggcc ttcgtgtcgg
     1201 gcgccgacat ctcggagttc gagaaggcgc gctcgacgcc ggagcagatc gcctactatg
     1261 acaagatcgg cgaggtcgcc aacgcccgtc tcgccaagtg ttccaagccg accatcgccc
     1321 gcatccgcgg ctactgcgtc ggcggcggcg tcgcggtgtc gctgacctgc gacatccgca
     1381 tcgcctcgga caattgcaag ttcggcgtgc cggccgccaa gctcggcctc ggttaccggg
     1441 cggccggcat caagaccttg atggatgtgg tcggtccggc ctacgccaag gagatcttct
     1501 tcaccggccg cctgttcagt gccgcggaag tgctgggcat gggcctgatc aaccgcgtcg
     1561 tcccggatgc cgagctcgac gcctatgtcg acaactactg cacgctgatc ggcgggaacg
     1621 cgccgctcac catgcatgcg gccaagcgga ccgtcgagga gctgacgcgg ctcgacggca
     1681 agcccgatct cggccgcacg gccaccctgg tcaaggagtg cttcgcctcc gaggactata
     1741 tcgaaggccg ccgcgccttc atggaaaagc gcaagccgca gttcaaggga cgttagacgt
     1801 tgcgagaaat gctgtcatcc ctcgctacgc tcgggatgac agggtgcgta aacaacacac
     1861 ccgctgtcac tccgccgcct tgcgccccac ctgccggcgc gacagccatt cgtgcatggc
     1921 ggcttccatg gtggtgaaca ccgcgccgcc ttcgatcagc ttctggatca gccgctccag
     1981 catcatcatg cgatggccgc ggccgatgac gtgcgggtgg aaggtgtagg tcaggatgcc
     2041 gaagtcgggc gccacgcgcg tcatgtaggt gaagtcgtcg acgaagttct ccagcacgtt
     2101 ggtggcgttc atcaggccgg cctggatcga gccgttggga ttgcgcatgt attcgaagtg
     2161 cgggaagtcg tcgagcgacc agctgatcgg catctcgacc aggctggtct cgcggccgcg
     2221 cacgaacggc ttcttaagct cggcgacgtc gccctggcgg gcgaagtagc agtcgtagtc
     2281 gtggcccatc agcgagctgt cgtacaggat gccctgcttc agcaggagtt cgatggaatg
     2341 gggcgagaga tcccaggcag gcgagcggta gccgcgcgcg gtgcggccgc tgatcttctt
     2401 gatcgactcg ttgccgcgca cgatctcctc ttcctcctcc tcgcgcgaca gcgacaccgg
     2461 caggcggtga gtccagccgt gatgggcgag ctcgtggccg gcctcgacat agggcgtgac
     2521 cgcttcgggc gtgctgtcga tcgtgtgacc gggtgtgaag aaggtcgcct tgatgtcgta
     2581 gcgcccgagc agcgccacca ggcggggaat gaccaccatg tcgtattcgc cgcgtgaaat
     2641 ggcggtcggc gaggccagcc cccgggcaat gaagccggac agatgatcgt ggtcgaaagt
     2701 aaggcaaacg acgtggcgtg acatggcgcg gccctcccgg atggcaattc aagcttaggc
     2761 agatttgttg ccttcgccca caggagcctg catgatcagg ccaacgataa ggaaaagtga
     2821 gtctgggttt tagggagggt tcatggtggg ggcgtccgcc cggcgcgtcg tcgcgcgaga
     2881 gggcgacaac cagcttgtgg tcgagggcgt gtccaagcgt ttcggcggcg tcaccgccgt
     2941 gcaggacgtg tctctcgacg tgccgacggg cagcatcctt tccatcatcg gtcccaacgg
     3001 agccggcaag acgtcgctgc tgaacatgat ctcgggcttc tacaagcccg atagcggccg
     3061 catccttctt gaaggccgcg acatcaccca gcgaaagccg agcgacattg ccgccctggg
     3121 catcgcccgc acctttcaga acatcgcgtt gttcagcgga ttgaccgtgc tggacaatct
     3181 catgctcggc cgccacgtgc gcatgaaggc gggcgtgctg gcctccgtcg tctattgggg
     3241 catggcgcag aaggaagaca tcgcccatcg cgcggcggtc gaggagatca tcgagttcct
     3301 gaagctccag gacctgcgca agctgccgac cgcggctctg gcctatggcc tgcgcaagcg
     3361 ggtcgaactc ggccgcgccc tggcggtcga gcccaaggtc ctgctgctcg acgagccgat
     3421 gggcggcatg aaccaggacg agaaggaaga catggcgcgc tacatcctgg acgtgaacca
     3481 ggagcgcggc gtcaccgtcg tgctgatcga gcacgacatg ggcgtggtca tggacatttc
     3541 cgaccgggtg gtggtgctcg atcgcggccg gcgcatcgcc gccggcacgc ccgaggaggt
     3601 ccagcgcgat cccgcggtca tcgaggccta tctcgggacg gcagccaaga gaggagggcg
     3661 cgcatgagcc tggccgacca cgacaagact tcgacattgc ccaagctcct gcagcgcaac
     3721 gccgagcaag accccaaggc tgccggcatc cgcgaaaaga cgcgcggcgt ctggcagacc
     3781 tacagttggt cggcctatcg cgacaacgtg cgcgactttg cgctcggcct ggccgcgttg
     3841 ggcttcaagc gcggcgacaa gctctcggtg gtgggcgaca accgtccgca gctctatttc
     3901 gcgcagctct cggcccaggt gctgggcggc gtgtcggtgc cggtctacca ggattcgatc
     3961 gcggcggagc tggtctatgt gctgaaccac gccgagaccg cgatcatcgt cgccgaggac
     4021 caggagcagg tcgacaaggc gctgtcgctc aaggcccaac tgcccaagct ccgctggatc
     4081 gtgttcgacg atccgcgcgg ccttgccttc tacgacgatc cgatcctgcg ctccttcgaa
     4141 agcgtgcagg cggagggccg cacgttcggc caggcccatc caggtttcta cgaagccgag
     4201 ctggccaagg gtgcgaccga cgacacggcg atgatcgcct acacctccgg caccacgggc
     4261 agccccaagg gcgtgatgct gagccatcgc aacatgatcg ccacggccgc ggccttcgtc
     4321 gaggtgaacg aggtcaagcc cggcgacaac tggctgtcgt atttgccgat ggcctgggtc
     4381 ggcgatgccg ccttcaccct cggcatggcg ctggtcgcca agctcaccgc caactgtccg
     4441 gagaatcccg agacggtgca gcgcgacctg cgcgaattgg gacccgacgc catgctggcg
     4501 ccgccgcgca tctgggagaa catgctgacc ctgatgcaga tcaagggcag cgacgcctcg
     4561 cccttgaagc gcggcgtgtt cggttatttt cgcggccttg ccgaacgctg cgagctcaag
     4621 cgcagcgacg gcaaggacct gtcgctggcc gaccggctgg gcctggcgct gggcgagatc
     4681 ctggtctacg ggccggtgcg cgaccagctc ggcctcggca aggcgcgctg gtgctacacc
     4741 ggcggcgcgc cgctgggacc cgacacctat cgcttcttcc gctccttcgg catcaacctc
     4801 aagcaggtct acggcgccac cgaggcgtcg gccctgatcg cctgccaggc cgacgccgag
     4861 gccaacccca acaccgtcgg ccggccgatc ccgcgcgtcg aggtcaagat cgacgatcgc
     4921 ggcgaggtca tgctgagggg cgccaacgtc ttcatgggct actacaagca ggaggaggtg
     4981 acgcgggaca ccctgacccc cgacggctgg ctgaagaccg gcgatgccgg cttctttgac
     5041 aagcagggcc atctcgtcat catcgaccgc gccaaggacg tcggcaaact gaccgacggt
     5101 tcggccttcg cgccgcaatt catcgagaac aagctgaagt tcagcccgtt catccgcgag
     5161 gctgtggcct tcggcgacca gcggccgttc gtcgtcgcca tgatcgccat cgacgcacag
     5221 acggtgggca cgtgggcgga gaagcagggg cttgcctata cgagcttcat ggacctcagc
     5281 cgcaagcccg aggtcgccgg gctgatcggg gcggagatcg ccaaggccaa tgccagcctg
     5341 cccgacatcc agcaggtcaa gcgctacctg ctgttgacca aggaactgga ggccgacgac
     5401 gccgagatga cacgcacccg caaggtgcgg cgccgcttcg tggccgagaa gtacgccagc
     5461 gtcatcgacg ccttctacgg cggcaaggag tcggccgacg tcacggtcga gatcaccttc
     5521 gaggatggcc gcaagtcggt gctcaactcg accatcgcca tccacggcaa ggcggcggcc
     5581 gaacccgcgc gccgggcggc atgacgatgg tgcttcattc gctgggggcg cgccactgcg
     5641 ggaaggaccg ctgatgtcgg aggacatgga attcctgctg gcgatggtgc tgagcggcgc
     5701 ttcgatcggc ctgatgtact cgctgatcgc gctcggtttc gtgctggtct acaaggcgac
     5761 cgacgccatc aacttcgcgc agggcgaatt cgtcatgctg gccgggctga tcctggtcgc
     5821 tgtgctgggc ttcgagggcg cgccgctgat cgccgccatc gtcgtggtgc tggcggcgat
     5881 gatcggcttc ggcttcggcc tggagcgcat cgtgctgcga ccgttgctgg gccgcccggt
     5941 ggtggcggtg atcatggcga ccatcgggct tgccgccatt atccgcgggc tggggccggt
     6001 gatcttcggg aaggaggttc gctccgtagc gctgccgatc ggcgacgacc cgatcgtgct
     6061 cggcccggcc aacctgccgc ccatccaggt gctgggcgcc gtggtggcca tcgcgttctt
     6121 cctgggcttc acctggttct tcaagaaaag ccgcatgggc gtggccatgc gcgcggtcgc
     6181 cgacagccag caggtggcgc aggccatggg catcaacgtc gagcgctact tcgcgctggc
     6241 ctgggcgatg gccggcgtcg tctcggcgct gggcggcatc gtctggggcg ccatgctggg
     6301 cgtcgacgtc caactggccc tggtcggcct aaaagtgttt ccggtggtga tcctgggcgg
     6361 cctcgattcg gtcggcggcg cgctggtcgg cggcctcatt atcggcatcg tcgaaagtct
     6421 cgccgcgggc tatctcgacc cctatgtcgg cggcggcacc aaggacttcg cgccctacgt
     6481 gctgatgatc ctgatgctga tgataaggcc ctacggcatc ttcggccgcc gccagatcga
     6541 gcgcgtgtag gtcatgttcc atcgcgagtc cggagtcttc aagacgacct acgccgccga
     6601 catggcgctc tacccgctgc caatcgccaa gtggacggtg atcgcgctgg cagcgctgtt
     6661 cgtgctgatc attccgctca ccgtccacga atactatctc tcgatcctga acctgatctt
     6721 catcgccatc gtcggcgcgt tggggctcaa catcctggtc ggctacaccg gccagatctc
     6781 gatcggccac ggcgccttca tgtcggtcgg cgcctacacg gcggccaacc tcgcggtgag
     6841 gctcggactg ccgttctggc tcaccctgcc ggccggcggg ttgatggcgg cgctgatcgg
     6901 ggtgatcgtc ggcatgccga gcctgcgcat caaaggcctc tatctcgcga tcgccaccct
     6961 tgccggccag ctcatcatcg aatggaccat caaccatgta ccggcgatct cgggcggcgc
     7021 gcaggcgtcg atcgaagtcg accggccgag cctgttcggc ttcagtttcg ccacccaggg
     7081 ccacctctat ttcttcctgc tgttcttcgc cgtgctcgcg atcgtggcga cgctcaacct
     7141 ggtgcgcagc cgcatcgggc gggcgttcgt ggcggtgcgc gaccaggaca tcgcggccga
     7201 gatcatcggc atcaatatct accgctacaa gctcttggcc ttcgccattt cgtccttcta
     7261 tgccggcgtc tgcggcgtgc tctacaccta ctatttcggc atcgccaatt acgagcaatt
     7321 ccagctcgtc gtctctatcg actacctcgc catgatcatt atcggcgggc tgggctccgt
     7381 tctgggctcg atcctggggg cgatcttcgt cacattgctg cccattgcta tccgtatctt
     7441 catggaggat gtgggggcgc tgtttttcag ctcggccgag atggccaacg tcatctcggg
     7501 cttgcggctg ggcgtattcg gcggcctgat catcttcttt ctgatcgtcg agcccgaagg
     7561 gctcaaccgt ctgtggagga atatccggag ctatttccgg gtttggccct tctcctatta
     7621 gagcggggcg tgttgcaaag ggaggaaccc atgacgaggt tcggcaagag tgtgctggga
     7681 attgcggcaa cgaccacg
//
LOCUS       DASWGA010000509         8016 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_692281, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000509 DASWGA010000000
VERSION     DASWGA010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8016
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692281"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1960)
                     /gene="cyoB"
                     /locus_tag="VF991_12120"
     CDS             complement(<1..1960)
                     /gene="cyoB"
                     /locus_tag="VF991_12120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014290474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HEX9557236.1"
                     /translation="MFGKLTIEALPLYSAIAASGALVTVGGAFLVFVVITWLKAWKYL
                     WTEWFTSVDHKRIGVMYIVLALVMLMRGFVDAIMMRAQQAMALDNGGYLPPEHFDQIF
                     SSHGTIMIFFMAMPFMTGLLNIGVPLQIGTRDVAFPFLNSLSLWLSAAGAGLVMVSLV
                     IGKFSTAGWTGYPPYSGIEYNPGVGVDYWIWALLISGVGSTLSGINFVVTILKRRAPG
                     MGLMRMTPFTWTALCTSVLMAFAFPALTVVCGLLALDRLLGMHFFTNGLGGNMMNYPN
                     LFWIWGHPEVYILILPAFGVFSEVVSTFSKKRLFGYESLVYATAAIAILSFTVWLHHF
                     FTMGSSANVNAFFGVTTMIIAVPTGVKVFNWLLTMYRGRITLHPAMLWTVGFIVTFVI
                     GGMTGVLLAMPPADFLMHNTTFLVAHFHNMIIPGVLFGYLAGYMYWFPKAFGFRMNEP
                     WGTAAFWFWIIGFYLAFMPLYVLGFMGMPRRMEQYNDPSWQPWLIAASLGAVLILIGI
                     ACLVIQLAVSIRDRRKTVDVTGDPYDGRTLEWATSSPPPPYNFALLPVVRDREPLLDM
                     KERGVAYQRPQAYEDIEIPKNSAVGVVLGGLAFVLGFGVVWHIWWLVILCGLAMWIAL
                     ILRASDDESEFVLVAAEVARIEEARYRAL"
     gene            complement(1966..2856)
                     /gene="cyoA"
                     /locus_tag="VF991_12125"
     CDS             complement(1966..2856)
                     /gene="cyoA"
                     /locus_tag="VF991_12125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol oxidase subunit II"
                     /protein_id="HEX9557237.1"
                     /translation="MKQAVIRSHRWAMALGAALLASGCDRAVVLNPKGPIADAERGLL
                     FDAFSVMMLVVVPVIVMAFVFAWRYRASNRNARYAPTWAYSARIDAVVWLVPALIVIA
                     VGVLVWRSTHKLDPYREIASDVPPLDVQVVAQDWKWLFIYPEQGIAVVNQMAIPSGRP
                     ISLRITSDTVMNSFYVPALAGQIYAMAGMQTRLQMLADTQGKFVGRNTQYSGGGFSDQ
                     YFEVLATSPADFEAWVAKAKQSSDKLDTAGYARLAEKSRRNPIAYYSAVEPRLFDSII
                     AKYNHDHRARSATPATPARR"
     gene            complement(2955..3338)
                     /locus_tag="VF991_12130"
     CDS             complement(2955..3338)
                     /locus_tag="VF991_12130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557238.1"
                     /translation="MAENEPSTERPRSRWPLILGSLVGGFLLLAAGLGLGWYLFYRPI
                     VNVAVQLPAPPPPPAPPGPDAAQVKALEDQIDKQKAANKQIEDQIALLKERLKADVCT
                     VKDPLGKNTPPSTPAPPGALPERRT"
     gene            3554..4723
                     /locus_tag="VF991_12135"
     CDS             3554..4723
                     /locus_tag="VF991_12135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEX9557239.1"
                     /translation="MTACIVGWSHGKFGKLDGETSESLIVKAAGEAIAHAGIEPKDID
                     VIYVGNMNGGFVRQEFHSSLPLQTHPDLRFKPSTRVENACATGSAAIHMGLNTLAAGK
                     ARFVLVVGVEKMTELNSAQAGEVLIKASYVAEEANIEAGFAGIFGKITSAYFQRYGDK
                     SDALAKIAVKAHKNGAKNPYAHFQKEFAYEFCRTPSDKNPFVAGPLKRTDCSPVTDGA
                     AAVVLTDVSTALGLKQAIAFRAAEHVNDFLPMSKRDIVKFEGPQLAWKKALASARLDL
                     LDLSFVESHDCFTSAELIEYEAMGLTAPGEGERAIHEGWVERDGKLPVNVSGGLKAKG
                     HPVGATGVSMHVMSAMQLSGTAPGGLQLPKTRIGGVFNMGGAAVANYVSILEPLR"
     gene            4728..5690
                     /locus_tag="VF991_12140"
     CDS             4728..5690
                     /locus_tag="VF991_12140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557240.1"
                     /translation="MRQVGRRESDAILGAMRQVALAGGRAITDADTASILAAGRYLLR
                     RPDLADLCTLPAVEPADLVAVLKNRELAAEAVKYLAIMVMVDGALDSDKLGRVLAYAR
                     ALDIEEDYLTEMVEAASGHMTWVIADMTRQNAESVIGKPWGDNPDPAEWILPYKGCKA
                     QPKLAARYDALGKLPGNSFGKALWNFDKQNGYAFPGEPTALNATFATPHDSTHVISGY
                     DTTYRGEILVSTFTAAMHPINPMAGHILPVIFNGHLGVRFNDVATPARGGFDPDEFWH
                     AWARGRDMTVDIFAPDWNVWDWVEKDLEEVRRIFNVAPAGPLSS"
     gene            complement(5764..6558)
                     /locus_tag="VF991_12145"
     CDS             complement(5764..6558)
                     /locus_tag="VF991_12145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9557241.1"
                     /translation="MDVRMDGRVAVITGSSTGLGLAMAKEFAASGASVALLARKADVL
                     ATAKAEVAKAAGKTNAKVEAYSCDVAKAQPIADTFKKVVADFGKVDIVVNNAGISHAK
                     PFETVTDDDWQGDLDLKLFAAIRLLRLALPGMRERKWGRVVNVLNIGAKAPGADSTPT
                     SVSRAAGLALTKALSKENAQHNVLVNAMLVGLIESDQWVRRHKALGKDQTFQQFVDGM
                     AKGRIPIGRMGKAEEFARMACFLCSDAGSFITGVAINVDGGASPVV"
     gene            complement(6572..>8016)
                     /locus_tag="VF991_12150"
     CDS             complement(6572..>8016)
                     /locus_tag="VF991_12150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9557242.1"
                     /translation="GRVLALDAVLAADAGWSLDMTPGVLARALTHVDNAYWIPHVRAT
                     GYGCRTNRQSNTAFRGFGGPQGVVVMEDAIDRIAHHLGRDANLIRALNFYAAGRDETP
                     YGQTVEENHLARCWAEVKQSSDFERRRAEIDAFNRTHPILKRGLGLFPLKFGISFNLP
                     HMNQAGALVHVYTDGSIRLNHGGTEMGQGLFVKVAQVVAEVFKVDIDRIRPSATSTAE
                     VPNTSPTAASTGSDLNGWAAWEAANTIKQRMIVFAAEHFGAAPGDIEFADGTVRIAKP
                     GSNQVVGFGELARLCWLGRVSLSATGFYKTPKIHWDAASMRGRPFFYFSFGAAAVEVA
                     IDMLTGESRVLRADLVQDCGASLNPAIDLGQIEGAFVQGQGWLTCEELWWDNEGRLRT
                     VGPSTYKIPGSRDVPAVFNVKMLENAPSREATIFRSKAVGEPPLLLATAVWTALKDAI
                     AAVGDHKTAVRLDAPATPERVLAAIATLKK"
BASE COUNT         1429 a         2607 c         2698 g         1282 t
ORIGIN      
        1 cgagcgcgcg gtagcgcgcc tcctcgatgc gcgccacctc ggcggcgacc agcacgaatt
       61 ccgactcgtc atcggaggcg cgcaggatga gggcgatcca catggcaagc ccgcacagga
      121 tcaccagcca ccagatgtgc cagaccacgc cgaagcccag cacgaaggcc agcccgccca
      181 gcacgacgcc gaccgccgag ttcttcggga tctcgatgtc ctcgtaggcc tgcggcctct
      241 ggtaggcgac gccacgttcc ttcatgtcga gcaacggctc gcggtcgcgc accaccggca
      301 gcagcgcgaa attgtagggc ggcggcggcg aggaggtcgc ccattcgagc gtgcgtccgt
      361 catagggatc gccggtgacg tcgaccgtct tgcgccggtc gcggatgctg acggcgagct
      421 ggatgaccag gcaggcgatg ccgatcagga tcaggacggc gcccagggag gcggcgatca
      481 gccagggctg ccagctcgga tcgttgtact gctccatgcg ccgcggcatg cccatgaagc
      541 ccagcacgta gagcggcatg aaggcgaggt agaagccgat gatccagaac cagaaggcgg
      601 cggtgcccca cggttcgttc atgcgaaaac cgaaggcctt ggggaaccag tacatgtagc
      661 cggcgagata gccgaacagc acgcccggga tgatcatgtt gtggaagtgc gcgaccagga
      721 aggtcgtgtt gtgcatcagg aagtcggccg gcggcatggc cagcagcacg cccgtcatgc
      781 cgccgatcac gaaagtgacg ataaagccca cggtccacag catcgccggg tgcaaggtga
      841 tgcggccgcg atacatggtg agcagccagt tgaacacctt cacgccggtc ggcacggcga
      901 tgatcatggt cgtcacgccg aagaaggcgt tgacgttggc cgacgagccc atggtgaaga
      961 aatggtgcag ccacaccgtg aacgacagga tggcgatcgc ggcggtggcg tagaccagcg
     1021 attcgtagcc gaacaaccgc ttcttcgaga aggtcgacac gacctcggag aacacgccga
     1081 atgccggcag gatcaggatg tagacctccg gatggcccca gatccagaac aggttggggt
     1141 agttcatcat gttgccgccc agcccgttcg tgaagaaatg catgccgagc aggcggtcga
     1201 gcgccagcag gccgcaaacc acggtgagcg ccgggaaggc gaaggccatc aggacggagg
     1261 tgcagagggc ggtccaggtg aacggcgtca tgcgcatcag gcccatgccc ggggcgcgcc
     1321 gcttcaggat ggtgacgacg aagtttatgc ccgacagcgt cgagccgacg ccgctgatca
     1381 gcagcgccca gatccagtaa tcgacgccga cgccgggatt gtactcgatg cccgaatagg
     1441 gtggatagcc ggtccagccc gcggtcgaga acttgccgat caccagcgag accatgacca
     1501 gcccggcgcc ggccgcactc agccacaggc tcagcgaatt caggaacggg aaggcgacgt
     1561 cgcgcgtgcc gatctgcagg ggcacgccga tgttcagcag cccggtcatg aacggcatcg
     1621 ccatgaagaa gatcatgatc gtgccgtgcg agctaaagat ctggtcgaaa tgctcgggcg
     1681 gcaggtagcc gccgttgtcg agcgccatcg cctgctgggc gcgcatcatg atggcgtcga
     1741 cgaagccgcg catcagcatg accagcgcca gcacgatgta catcacgccg atgcgcttgt
     1801 gatcgacgct ggtgaaccat tcggtccaca ggtacttcca ggccttgagc caggtgatga
     1861 cgacgaagac gaggaacgca ccgcccacgg tgaccaaggc gccgctggcg gcgatcgcgc
     1921 tgtagagcgg cagggcctcg atcgtcagtt tgccgaacat gcgctctatc tccgggccgg
     1981 cgttgccggc gtcgcgctgc gcgcgcggtg gtcgtggttg tacttggcga tgatggagtc
     2041 gaagagccgg ggctcgaccg ccgaatagta ggcgatgggg ttgcgccggc tcttctcggc
     2101 gagccgcgcg tagcccgcgg tgtcgagctt gtcggacgac tgcttggcct tggccaccca
     2161 ggcctcgaag tccgccggcg aggtcgccaa tacctcgaaa tactgatcgg agaagccgcc
     2221 gccgctatat tgcgtgttgc ggccgacgaa cttgccctgg gtgtcggcca gcatctgcag
     2281 gcgcgtctgc atgcccgcca tggcgtagat ctggccagcc agcgccggca catagaacga
     2341 gttcatcacg gtgtcggagg tgatccgcag gctgatcggc cgcccgctcg ggatcgccat
     2401 ctggttcacc accgcgatgc cctgttcggg atagatgaac agccacttcc agtcctgcgc
     2461 caccacctgg acgtcgagcg gcggcacatc ggaggcgatc tcgcggtagg gatcgagctt
     2521 gtgcgtgctg cgccacacca ggacgccgac cgcgatgacg atcagcgccg gcaccagcca
     2581 gaccacggcg tcgatccggg ccgagtaggc ccaggtcggc gcatagcggg cgttgcggtt
     2641 ggaggcgcgg taccgccagg caaagacgaa ggccatgacg atgaccggca cgaccaccag
     2701 catcatcacg gaaaaggcgt cgaacagcag gccgcgctcg gcgtcggcga tcgggccttt
     2761 ggggttcagg acgaccgcgc ggtcgcagcc gcttgccagc agggccgccc ccaaggccat
     2821 cgcccagcga tgcgatcgaa tgacagcctg cttcacgccc tcgtccgcac tcttcattga
     2881 gtgtcggcgc tagagtgaag ctacatgttg tggtgggcaa tgattctttt tgccgacctc
     2941 aacgacaacg tcgtctaggt cctgcgctcg ggaagcgcgc cgggcggtgc cggcgtcgag
     3001 ggcggcgtgt tcttgcccag cggatccttg acggtgcaaa cgtcggcctt caaccgctcc
     3061 ttcaggagcg cgatctggtc ctcgatctgc ttgttggccg ccttctgctt gtcgatctgg
     3121 tcttccagcg ccttgacctg cgcagcatcg ggaccgggcg gcgcgggcgg cggcggaggc
     3181 gccggcaact gcaccgcgac gttcacgatc gggcgataga aaagatacca gccgagccca
     3241 agcccggcgg cgagcagcag gaaaccgccc accaggctgc cgaggatcaa gggccagcgg
     3301 gatcttggac gttcggtcga cggctcgttt tcagccatga gtgaaattgg gctcccggga
     3361 gacgccacag tcaataccgg cgggacggcg gaattggggc gggcccgggg ctgtatgggg
     3421 gtgaggaaat ctcctgcaag gcggcttgca agaggaccga ggccatataa gtgtatctac
     3481 acctagtatg ggcgccctcg acccgtctgg ccccggcgtc tagggtcgcc ggccagcagc
     3541 aaaggagatt tccatgaccg cctgcatcgt cggatggtcc cacggcaagt tcggcaagct
     3601 cgacggcgag accagcgaat cgctgatcgt gaaagccgcc ggcgaggcca tcgcccatgc
     3661 cggcatcgag cccaaggaca tcgatgtcat ctatgtcggc aacatgaacg gcggctttgt
     3721 gcgccaggaa ttccattcct ccctgccgct gcagacccac cccgacctcc gcttcaagcc
     3781 ttcgacgcgt gtcgagaacg cctgcgccac cggctcggcg gcgatccata tggggctcaa
     3841 tacgcttgcc gccggcaagg cgcgcttcgt gctggtggtc ggcgtcgaga agatgaccga
     3901 gctcaattcg gcccaggcgg gcgaggtgct gatcaaggcg tcctacgtcg ccgaggaggc
     3961 caacatcgag gcgggtttcg ccggcatctt cggcaagatc acctcggcct acttccagcg
     4021 ctacggcgac aaatccgatg cgctggccaa gatcgcggtc aaggcgcaca agaacggcgc
     4081 caagaacccc tatgcgcact tccagaagga gttcgcctac gagttctgcc gcacgccctc
     4141 ggacaagaac ccgttcgtcg ccggtccgct gaagcgcacc gactgctcgc ccgtcaccga
     4201 cggcgcggca gcggtggtat tgaccgatgt ttcgaccgcg ctcggcctga agcaggcgat
     4261 cgccttccgg gcggccgagc acgtcaacga cttcctgccc atgagcaagc gcgacatcgt
     4321 gaagttcgag ggcccgcagc ttgcctggaa gaaggcgctg gcctcggcgc ggctcgacct
     4381 gctcgatctc tccttcgtcg agagccacga ctgcttcacc tcggccgagc tgatcgagta
     4441 cgaggcgatg ggcctcaccg cgcccggcga gggcgagcgg gcgatccacg agggctgggt
     4501 cgagcgcgac ggcaagctgc cggtcaacgt ctcgggcggg ctgaaggcca agggccatcc
     4561 ggtcggcgcc acgggtgtca gcatgcacgt gatgtcggcc atgcagctct ccggcaccgc
     4621 gcccggtggc ctgcagctgc ccaagaccag gatcggcggc gtgttcaata tgggcggcgc
     4681 ggccgtcgcc aactacgtga gcatcctcga gccgctgcgc tagcacgatg cgccaggtcg
     4741 gccgccgcga gagcgacgcc atcctgggcg ccatgcgcca ggtggcgctg gccggtggcc
     4801 gggcgattac cgacgccgat acggcgagca tcctggcggc gggacgctat ctcctgcgcc
     4861 ggcccgatct cgccgacctc tgcaccctgc ccgctgtcga gccggccgac ctggtcgcgg
     4921 tcctgaagaa ccgggagctt gcggccgagg cggtgaagta tctcgccatt atggtgatgg
     4981 tcgacggagc cctcgacagc gacaagctcg gccgcgtgct ggcctatgcc cgtgcgctcg
     5041 acatcgagga ggactacctc accgagatgg tcgaggcggc atccggccac atgacctggg
     5101 tgatcgccga catgacgcgg cagaacgcgg aaagcgtcat cggcaagccg tggggcgata
     5161 accccgatcc ggccgaatgg atcctgcctt acaagggctg caaggcccag cccaagctgg
     5221 cggcgcgcta cgacgcgctg ggcaagctgc cgggcaacag cttcggcaag gcactgtgga
     5281 acttcgacaa gcagaacggc tacgccttcc cgggcgagcc cacggcgctc aacgcgacct
     5341 tcgccacgcc gcacgattcc acgcacgtga tctcgggcta cgacaccact taccgcggcg
     5401 agatcctggt ttcgaccttc acggccgcca tgcacccgat caatccgatg gcgggccaca
     5461 tcctgccggt gatcttcaac ggccatctcg gcgtcaggtt caacgacgtc gccacgccgg
     5521 cgcgcggcgg cttcgacccc gacgagttct ggcacgcctg ggcgcgcggc cgcgacatga
     5581 ccgtcgacat cttcgcgcct gactggaacg tctgggactg ggtcgagaag gacctcgagg
     5641 aggtccggcg catcttcaac gtcgcgccgg ctggccctct gtcatcctga gcggagcgaa
     5701 ggatctcatg ccggtggcaa gcggcgatga ggtccttcgc ttacgctcag gacgacatga
     5761 aggctaaacc actgggctcg cgccgccgtc gacgttgatg gcgacgccag tgatgaagga
     5821 accggcgtcg gagcagagga aacaggccat gcgcgcgaac tcctcggcct tgcccatgcg
     5881 gccgatcggg atgcgtccct tggccatgcc gtcgacgaac tgctggaagg tctgatcctt
     5941 gccgagcgcc ttgtggcggc gcacccactg gtcgctttcg atcaagccga ccagcatggc
     6001 attgaccagg acattgtgct gggcgttctc cttggagagc gccttggtca gcgcgagacc
     6061 cgcagcgcgg ctgacgctgg tcggcgtgct gtcggcgccc ggcgccttgg cgccgatgtt
     6121 cagcacattg acgacgcgac cccatttgcg ctcgcgcatt ccgggcagcg cgaggcggag
     6181 caggcggatg gcggcgaaca gtttcaggtc gaggtcgccc tgccaatcat catcggtcac
     6241 cgtctcgaaa ggcttggcgt ggctgatgcc ggcattgttg acgacgatgt cgaccttgcc
     6301 gaaatcggcc acgaccttct tgaaggtgtc ggcgatcggc tgtgccttgg cgacgtcgca
     6361 ggaataggcc tcgaccttgg cgttggtctt gccggcggcc ttggcgacct cggccttggc
     6421 cgtggccagc acgtcggcct tgcgcgccag cagcgccacc gaggcgccgg aggcggcgaa
     6481 ttccttggcc atcgccagac ccaggccggt gctcgaaccg gtgatcacgg ccacgcggcc
     6541 atccatgcgt acgtccattg tcccctccgt tttacttttt gagtgtagcg attgccgcca
     6601 gcacacgctc gggggtggct ggcgcatcga gccgcactgc ggtcttgtgg tcgccgaccg
     6661 ccgcgatggc gtccttgagc gcagtccaga cggcggtcgc gagcagcagc ggcggctcgc
     6721 cgaccgcctt ggagcggaag atggtggctt cgcgcgacgg cgcgttctct agcattttca
     6781 cattgaacac cgccggcacg tcgcggctgc cggggatttt atacgtcgag ggaccgacgg
     6841 tgcgcagcct gccctcgttg tcccaccaca gctcctcgca ggtgagccag ccctggccct
     6901 gcacgaaggc gccctcgatc tgaccaagat cgatggcggg attgagcgag gcgccacagt
     6961 cctgcaccag gtcggcgcgc agcacgcgac tctcgccggt gagcatgtcg atcgccactt
     7021 ccactgcggc cgcgccgaac gagaaataga agaacggccg gccgcgcatc gacgcggcgt
     7081 cccaatggat cttgggcgtc ttgtagaagc cggtggccga cagcgacacc cgacccagcc
     7141 agcagagccg cgccagctcg ccgaagccca cgacctggtt gctgcccggc ttggcgatgc
     7201 ggacggtgcc gtcggcgaat tcgatatcgc cgggcgcggc gccgaaatgc tcggcggcga
     7261 acacgatcat gcgctgcttg atggtgttgg ccgcctccca cgccgcccag ccgttgaggt
     7321 ccgagcccgt cgaggccgcg gtcggcgatg tgttgggcac ttcggcggtt gaggtcgccg
     7381 agggccggat gcggtcgatg tcgaccttga agacctcggc cacgacctgg gccaccttca
     7441 cgaacagccc ctgccccatc tcggtgccgc catggttcag gcggatcgag ccgtcggtat
     7501 agacatgcac cagcgcgccg gcctggttca tgtgcggcag gttgaaggag atgccgaact
     7561 tcagcgggaa caggccaagc ccgcgcttga gaatcggatg ggtgcgattg aaggcgtcga
     7621 tctcggcgcg ccgccgctcg aagtcgctgc tctgtttcac ctcggcccag cagcgcgcca
     7681 ggtgattctc ctcgaccgtc tggccgtaag gcgtctcgtc acggcccgcg gcatagaaat
     7741 tgagcgcccg gatcaggttg gcgtcgcggc cgagatggtg cgcgatgcgg tcgatcgcat
     7801 cttccatcac cacgacgccc tgcgggccgc cgaagccgcg gaaggcggtg ttggactgcc
     7861 ggttggtgcg gcagccatag cccgtggccc ggacatgcgg gatccaatag gcgttatcga
     7921 cgtgggtgag cgcgcgtgcg agcacgcccg gggtcatgtc gaggctccag ccagcgtcgg
     7981 ccgccagcac cgcgtcgagc gccagcacgc ggccct
//
LOCUS       DASWGA010000510         5911 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1958855, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000510 DASWGA010000000
VERSION     DASWGA010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5911
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1958855"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1342
                     /locus_tag="VF991_12155"
     CDS             <1..1342
                     /locus_tag="VF991_12155"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557243.1"
                     /translation="VVKPMPGNLLAPSLAESWTVSPDGLTYEFVLRKGVRFHNGDPVT
                     ADDVKFSFDRYRGTAHDLLKQRVAGVETPDARHVRFQLKEPWPDFLTFYSTMTGAGWI
                     VPRKYVEKVGDEGFKKAPVGAGPYKFVSFNPGVELVFEAFDQYWRKPPAVKRLVFKVI
                     PDEATRLAALKRGEVDLAYSIRGELAEELRRTPGLELKPVVINSPFWIYFADQWDPKS
                     PWHDVRVRKAVTLALDRDGINQALTLGYSPITGSIVPKDYEFYWQPPKIPHDPAAARR
                     LLAEAGFRGGFDAGEYYCDASYANLAEAALNGLEDVGIRVKLRPIERAAFNTGYAEKK
                     YRNIIQGGSGAFGNAATRMETFVVKGGAYVYGSYPDIDELFAQQAVETDRAKRAPILH
                     RMQQLVHERTVYAPLWQLAFLNGQGPRVGESAFGLIGGHPYSAPYEDVRLKNGA"
     gene            1358..2911
                     /locus_tag="VF991_12160"
     CDS             1358..2911
                     /locus_tag="VF991_12160"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557244.1"
                     /translation="MVSPSLCTTRRGVLGLSVAAMIGVAPRSASAAADGQITVGAHVS
                     LAPTWFDPAETSGIITPFMLLYAMHDAMMKAMPDNPMAPCLAESWTMAPDGLSYAFTL
                     RKGVLFHNGEALTAEDVKFSLERYRGAASKTLKERVAGVDIHDPHRLTIRLNEPWPDF
                     LTFYASATGAGWIVPKKYVQQVGEDGFKKAPIGAGPYKFVSFTPGVELVCEAFEGYWR
                     KVPAIKRLVFKVIPDEATRLAALQRGEIDIAYSIRGELADELTRTPGLSIKPAVGSAP
                     FWLYFPEQWDPRSPWHDQRVRLATNLALDRKTINQALTLGYSRLTGSIFPENFEFYWQ
                     PPEPVYDPGRARKLLAEAGHARGFDAGDYYCDTSYGNIGEVVLNNLREVGIRVKLRPL
                     ERAAFFTAYSEKKLKNIVQGASGAFGNCATRAEAFVAKGGTYVYGSYPDIDALFAEQA
                     VQMDRAKRETMLQRLQKLVHEKTIYAPIWQLAFISGVGPKVGQSGFGLIKGFVYTAPY
                     EDLTLKGKA"
     gene            2953..3873
                     /locus_tag="VF991_12165"
     CDS             2953..3873
                     /locus_tag="VF991_12165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557245.1"
                     /translation="MKQYIARRVGYSLLSLFLLSLVIFLFVRVTGDPVSLLVEPGASP
                     EDIENMRRQFGLDRPLWEQYGHFMASLAVGDLGQSFYYRTPVLELYFQRLPNSLLLAA
                     VAMSLSLLIGIPSGILAAVRVDGFWDSAGKIFALLGLSLPSFWVGLVLILFFSVYLGW
                     LPSSGSGSALHLLMPAFTLGWYFAAAHMRLTRSSMLEVLGSEYIKLARLKGLPEALVI
                     GKHALKNALIPVITLAGINLVVMINVAVVVETVFAWPGIGRLLYEGITFRDFPIVQGV
                     VIIGGAMIVLVNLFVDILYALIDPRIRLES"
     gene            3879..4772
                     /locus_tag="VF991_12170"
     CDS             3879..4772
                     /locus_tag="VF991_12170"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557246.1"
                     /translation="MTVTTPPIAAATTDVPPAAFWRLKGFPLIPVLILLFIAFVAVFA
                     DVLAPYDPQVGSLARRFRPPAWQDGGSMAYLLGTDHVGRDVLSRLIFGARVSMIVGIT
                     AVLVAGGIGTLLGIVSGYLGGWADQVVMRITDTWLALPALTFAIFLAAIVGPSEFNII
                     LILGLVYWTRYARVIRGEVLSLKQREFVRLAIVAGCSSRVIMWRHILPNVINSAVVLA
                     TLMLGVVIVTEASLSFLGVGVPPPKPAWGLMMADGKKGLMVGYWWLTVLPGICIMLMV
                     LSANLLGDWLRVKLDPQLRQL"
     gene            4781..5800
                     /locus_tag="VF991_12175"
     CDS             4781..5800
                     /locus_tag="VF991_12175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557247.1"
                     /translation="MSSQPLLSLEHLSAHYVSQQGARVVRAVDDVTLSLNAGGTLGIV
                     GESGSGKTTLALTIMRLLPPAARIVSGRMMFEGANLVDKSDTEMRRVRGKRIAMILQD
                     PMASLNPLFSIGNQVGEPLRVHEGASRASAWQRAVALLKSVRIASPETRVSQFPHEMS
                     GGMRQRIVGAIGISCEPRLLIADEPTTSLDLTIQAQYLNLLRDLQREHGLALIFITHN
                     LGIVAKMCDQLAVMYAGRVVEQGPVSRIFNTPAHPYTKALLGSIPRMTDNREHLTAIE
                     GQPPDLSALPPGCAFAPRCPMAFARCRAEAPPEFAVDEGRTARCWLAAPGVDAKAEMK
                     RSSVA"
BASE COUNT          940 a         1978 c         1903 g         1090 t
ORIGIN      
        1 tgtcgtgaag ccgatgccgg gcaacctgct ggcgccgagc ctggccgaat cgtggacggt
       61 gtcccccgac gggctcacgt atgagttcgt cctgcgcaaa ggcgtcaggt tccacaacgg
      121 cgacccggtc acggccgacg acgtcaagtt ctcgttcgac cgctaccgcg gcaccgcgca
      181 cgacttattg aagcaacgcg tggcaggggt ggaaacgccc gacgcgcggc atgtccgctt
      241 ccagttgaag gagccgtggc ccgatttcct gaccttttat tcgacgatga ccggggcggg
      301 ctggatcgtg ccgcggaaat acgtcgaaaa ggtcggcgac gaaggtttca aaaaggcgcc
      361 ggtcggcgcc gggccctata aattcgtctc gttcaacccc ggcgtcgagc tggtcttcga
      421 agccttcgac cagtattggc gcaagccgcc cgcggtgaag cgcctcgtct tcaaggtcat
      481 acccgatgag gcgacgcgcc tcgcggcgtt gaagcgcggc gaggtcgatc tcgcctactc
      541 gatccgcggc gagctggccg aggaattgcg gcgcacaccc gggctggagc tgaagccggt
      601 ggtgatcaac tcgccgttct ggatctattt cgccgatcag tgggacccga aatcgccctg
      661 gcacgacgtg cgggtgcgca aggccgtgac gctggcgctg gaccgcgacg gcatcaacca
      721 ggcgcttacg ctcggctatt cgccgatcac cggcagcatc gtgccgaagg actacgagtt
      781 ctactggcag ccgccgaaga ttccgcacga tccggcggcc gcgcgccggc tgctggccga
      841 ggcgggcttc cgcggcggct tcgatgccgg ggagtattat tgcgacgcct cctatgccaa
      901 cctcgccgag gcggcgctga acggcctgga ggatgtgggc atccgcgtga agctgcgccc
      961 gatcgagcgg gcggccttca acacgggata tgccgagaag aaatatcgca acatcatcca
     1021 gggcggcagc ggtgcgttcg gcaacgcggc cacacggatg gagaccttcg tcgtcaaggg
     1081 cggcgcctac gtctatggca gctaccccga catcgacgaa ctgttcgccc agcaggcggt
     1141 ggaaaccgat cgcgccaaac gcgcgccgat cctgcaccgc atgcagcagc tggtgcatga
     1201 gcgcacggtc tacgcgccgc tgtggcagct cgccttcctc aacggccagg gcccgcgggt
     1261 cggcgaatcg gccttcggcc tgatcggcgg gcacccatat tccgcgccct acgaagacgt
     1321 tcgcctgaaa aacggcgcat agcaggggac acggccaatg gtttcgccat ctctgtgcac
     1381 cacgcgccgc ggcgttctcg gtctttccgt ggctgccatg atcggcgtcg ccccacgctc
     1441 ggccagcgcg gcggcggacg gacagatcac cgtcggcgcg catgtctcgc tggcgccgac
     1501 ctggttcgat ccggcggaga cctccggcat catcacgccc ttcatgctgc tctacgccat
     1561 gcatgacgcg atgatgaagg cgatgccgga caacccgatg gcgccctgcc tggccgaatc
     1621 ctggaccatg gcgcccgatg ggctgagcta tgccttcacg ctgcgcaagg gcgtgctgtt
     1681 ccacaacgga gaggcgctga cggcggagga tgtgaaattc tcactggaac gctatcgcgg
     1741 cgccgcgagc aagacgttga aggagcgtgt ggcgggtgtg gacatccacg atccgcaccg
     1801 cctgacgatc cggttgaacg agccctggcc ggatttcctg accttttatg caagcgccac
     1861 cggcgcgggc tggatcgtgc ccaagaaata cgtccagcag gtcggcgagg acggtttcaa
     1921 gaaggcgccg atcggcgcgg ggccgtacaa attcgtctcc ttcacccccg gcgtcgagct
     1981 ggtgtgcgag gcattcgagg gttactggcg caaggtgccg gccatcaagc ggctggtctt
     2041 caaggtcatc ccggacgaag cgacgcggct ggcggctttg cagcgcggcg agatcgacat
     2101 cgcctattcg atccgcggcg agttggccga cgagctgacg cgcacgcccg gcctctcgat
     2161 caagccggcg gtgggatcgg cgccgttctg gctctacttc ccggaacagt gggatccacg
     2221 gtcgccgtgg cacgatcagc gcgtgcgctt ggcgaccaat ctcgcgttgg accgcaagac
     2281 gatcaaccag gcgctgacgc tcggctattc acgcctgacg ggcagtatct tcccggagaa
     2341 tttcgaattc tactggcagc cgcccgagcc ggtgtacgat ccggggcgcg cccgcaagct
     2401 cctggccgaa gctgggcacg cgcggggctt cgatgccggg gattattact gcgacacctc
     2461 ctatggcaat atcggcgagg tcgtgctgaa caacctgcgg gaagtcggca tccgggtgaa
     2521 gctgcgcccg ctggaacgcg ccgccttctt cacggcctac tcggagaaga agctgaagaa
     2581 catcgtgcag ggcgcctccg gcgccttcgg taactgcgcg acacgagccg aggccttcgt
     2641 ggcgaaaggc ggcacatatg tctacggcag ctatcccgat atcgatgcgt tgttcgccga
     2701 gcaggccgtg cagatggacc gcgccaagcg cgagacgatg ctgcagcgcc tgcagaagct
     2761 cgtgcacgag aagacgatct atgcgccgat ctggcagctc gccttcatct ccggcgtcgg
     2821 accgaaggtc gggcaatcgg gcttcgggct gatcaagggc ttcgtctaca ccgcgcccta
     2881 cgaagacctg accctcaagg gcaaggcgta gaacatggtc cgcctctgta ctaagcgcag
     2941 ggaacccttg ccatgaaaca gtacatcgcc cgccgcgtcg gctattctct gctgtcgctg
     3001 ttcctgctgt cgctggtgat cttcctgttc gtgcgcgtga ccggcgatcc ggtgagcctg
     3061 ctggtcgaac ccggcgccag cccggaagac atcgagaaca tgcgccgcca gttcggtctc
     3121 gatcggccgc tctgggagca gtacgggcat ttcatggcga gtctcgccgt gggcgacctc
     3181 ggccagtcct tctactatcg cacgccggtg ctcgagctct atttccagcg cctgcccaat
     3241 tcgctgctcc tggcggcggt ggcaatgtcg ttgtcgctcc tgatcggcat cccgagcggt
     3301 atcctggccg ccgtgcgcgt cgacggcttt tgggacagcg ccggcaagat cttcgcgctg
     3361 ctcggtctgt cgctgccgtc cttctgggtc gggcttgtgc tgatcctgtt cttctccgtc
     3421 tacctcggct ggctgccgtc gtccggttcc ggctcggcgc tgcatctgct gatgccggcc
     3481 ttcacgctcg gctggtattt cgccgcggcg cacatgcggc tcacgcggtc ctccatgctg
     3541 gaggtgctcg gctcggaata catcaagctg gcgcggctaa aagggctgcc ggaggcgctg
     3601 gtgatcggca agcacgcgct caagaacgcg ctgatcccgg tgatcacgct cgctggaatc
     3661 aatcttgtcg tgatgatcaa tgtcgcggtg gtggtggaga cggtgttcgc ctggcccggc
     3721 atcggccggc tgctctacga aggcatcacc ttccgcgact ttcccatcgt gcagggcgtc
     3781 gtgattatcg gcggcgccat gatcgtgctg gtcaatctgt tcgtcgacat cctctacgcg
     3841 ttgatcgatc cccgcatccg tttggaaagc tgacggccat gactgtcacc acgcctccca
     3901 tcgccgccgc cacgaccgac gtgccgccgg ccgccttctg gcggctgaaa gggtttccgc
     3961 tgatcccggt gctgatcctg ctgttcatcg ccttcgtcgc cgtcttcgcc gacgtgctgg
     4021 cgccgtacga tccgcaggtc ggcagcctgg cgcgccgctt ccgcccgccg gcctggcagg
     4081 acggcggcag catggcctat ctgctcggca ccgaccatgt cgggcgcgat gtgctgtcgc
     4141 ggctgatctt cggggcccgc gtgtcaatga tcgtcggcat caccgccgtg ctggtcgccg
     4201 gcggcatcgg cacgctgctc ggcatcgttt ccggctatct cggcggttgg gccgaccagg
     4261 tggtcatgcg catcacggac acctggctgg cgctgccggc gctgaccttc gccatcttcc
     4321 tcgccgccat cgtcgggccc agcgagttca atatcatcct catcctgggc ctggtctact
     4381 ggacgcgtta cgcccgcgtc attcgcggcg aggtgctgtc gctgaaacag cgcgagttcg
     4441 tgcgcctcgc catcgtcgcc gggtgctcca gtcgcgtcat catgtggcgc cacatcctgc
     4501 ccaacgtcat caattccgcc gtcgtgctcg ccacgctgat gctcggcgtg gtgatcgtca
     4561 ccgaagcctc gctctccttc ctcggcgtcg gcgtaccgcc gcccaagccc gcctgggggt
     4621 tgatgatggc ggacggcaag aaggggctga tggtgggcta ctggtggctc acggtgctgc
     4681 ccggcatctg catcatgctc atggtgttgt cggccaacct gctcggcgac tggctgcgcg
     4741 tgaagctcga tccgcaactg cgccaactgt gaaagccgtc atgtcgtcgc aaccgctgct
     4801 gtcgctcgaa catctttccg cccactacgt ctcccagcag ggcgcgcgcg tggtgcgcgc
     4861 cgtcgacgat gtgacgctca gcctgaacgc gggaggaacg ctcggcatcg tcggagaatc
     4921 gggttcgggc aagaccacgc ttgcgctgac catcatgcgc ctgctgccgc cggcggcgcg
     4981 catcgtcagc ggtcggatga tgttcgaggg cgcgaacctg gtcgacaagt cggatacgga
     5041 gatgcgccgc gtgcgcggca aacgcatcgc catgatcctg caggacccca tggcctcgct
     5101 caacccgctg ttttccatcg gcaaccaggt cggcgaaccg ctccgcgtgc acgaaggcgc
     5161 aagccgtgcc agcgcctggc aacgcgcggt ggctttgctc aagtcggtcc gcatcgcatc
     5221 gcccgaaacc cgcgtgtcgc agttccccca tgaaatgtcg ggcggcatgc gccagcgcat
     5281 cgtcggcgcc atcggcattt cctgcgaacc gcgcctcttg atcgccgacg agccgaccac
     5341 cagcctcgat ctcaccatcc aggcgcaata cctcaacctg ttgcgcgacc tgcagcgcga
     5401 gcatggcttg gcgctgatct tcatcacgca caatctcggc atcgttgcta agatgtgcga
     5461 ccagctcgcc gtgatgtatg ccgggcgtgt cgtcgagcag ggaccggtgt cgcgcatctt
     5521 caacacgccg gcccatccct acaccaaggc gctgctcggc tcgatcccgc ggatgacgga
     5581 caaccgcgag catctcaccg ccatcgaggg tcagccgccc gatctctccg ccttgccgcc
     5641 cggctgcgcc ttcgcgccgc gctgcccgat ggcgttcgcc cgctgccgcg ccgaggcgcc
     5701 gccggaattc gcggtcgacg agggccgcac cgcgcgctgc tggctggccg cacccggtgt
     5761 cgacgcgaag gccgagatga agaggagcag cgtggcatga tccccgttct ggtagccgcc
     5821 ggtctcagca agcatttccc ggcgcggcgc ggcatcttcg gcggcgatcg cggcgtggtg
     5881 cgcgcggtcg acgacatcac cttttccatc g
//
LOCUS       DASWGA010000511         1777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1201753, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000511 DASWGA010000000
VERSION     DASWGA010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1201753"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..931)
                     /locus_tag="VF991_12180"
     CDS             complement(62..931)
                     /locus_tag="VF991_12180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007197901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557248.1"
                     /translation="MSDIWWSFRHSPLTVVAAIVTALYFLGAIFAPWVAPFDPFDVKS
                     LNLMDAFTPPGAGHLLGTDNQGRDVLSAILYGSRVSLMIGLAAIVLSVTTGVLLGLLA
                     GFRGGWIEAVVMRLADIQLTVPAILIALTLDGVARVVLPKNVHDDIAIWVLVLSIGFA
                     YWPQFARVTRATTLAEKNKDYVNAARIIGVPGARIALGHVLPNAWGPVLVIATIELAL
                     AIIAEASLSYLGVGMPATQPSLGTLIRIGNAFLFSGEWWIVIFPALALVILSLSVNLL
                     GDWLRDAINPKLR"
     gene            complement(928..>1777)
                     /locus_tag="VF991_12185"
     CDS             complement(928..>1777)
                     /locus_tag="VF991_12185"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557249.1"
                     /translation="VGGGCAGAFMGVVFAEVSGRVPDGQRGRALGWVMSGQSLTLVVG
                     VPMAAAVGGLIGWRGWLICVGAMSLVASLSLFATVGRGTAGHLRGMVRPSLRAALPPK
                     VLGLLGTGIAERICYGLAAVYFATFLQETFHLSLVETAIPLAVFALGNVAGTVLGGQL
                     ADRVRDRLLTFAVAMALSAGAAIALFTWHPSVAISVSLGFIYVLLNALGRPSYMAALA
                     SVPENVRGTVLGLNGATASVGWIGAAALGAAMIGWVGFEGFGPLAAALALAGAGGALL
                     GRRSKP"
BASE COUNT          355 a          617 c          598 g          207 t
ORIGIN      
        1 gtcgaacatg gcgcaatctt aaaagagaat ttctaccctg taaaacaacc tatgatagaa
       61 ttcagcgcag tttgggattg attgcatcgc gcagccagtc acccaaaaga ttgaccgaga
      121 gcgacaggat caccagcgcc agcgcgggga agatcacgat ccaccattcg ccggagaaca
      181 ggaaggcgtt gccgatgcgg atcagggtgc cgagcgaggg ctgggtggcc ggcatgccga
      241 ccccgagata ggacagcgag gcctcggcga tgatggcgag cgccagctcg atggtggcga
      301 tcaccagcac cggtccccag gcgttgggca acacatggcc aagcgcaatg cgcgcgcccg
      361 gcacgccgat gatgcgcgcg gcgttgacgt aatccttgtt cttctcggcg agcgtcgtgg
      421 cgcgggtgac gcgcgcgaat tgcggccagt aggcgaagcc gatcgacagc accagcaccc
      481 agatggcgat gtcgtcgtgc acgttcttgg gcagcacgac gcgagccacg ccatcgagcg
      541 tcagcgcgat caggatggcg ggcacggtga gctggatgtc ggccagccgc atcaccacgg
      601 cctcgatcca gccgccgcgg aaaccggcta aaaggcccag cagcacgccg gtcgtcaccg
      661 acagcacgat ggcggccagc ccgatcatca gcgatacccg gctgccgtaa aggatggccg
      721 acagcacgtc gcgcccctgg ttgtcggtgc cgagcaggtg gccggcgccg ggcggggtga
      781 aggcatccat caggttcagg gacttcacgt cgaacggatc gaatggcgcc acccacggtg
      841 cgaagatggc gccgaggaaa tagagcgccg tcacgatcgc cgcgaccacg gtgagcggcg
      901 aatggcggaa gctccaccag atgtcgctca tggcttgctc cggcggccga gcagcgcgcc
      961 gcccgcgccg gccagcgcca gggcggcggc gagcgggccg aagccctcga agcccaccca
     1021 gccgatcatc gccgcgccga gcgccgccgc gccgatccag ccgacgctgg ccgtggcgcc
     1081 gttcagcccc agcacggtac cgcggacatt ctccggcacc gacgccagcg ccgccatata
     1141 ggagggccgg ccgagcgcat tcagcagcac atagatgaag cccagcgaca ccgagatcgc
     1201 cacgctggga tgccacgtga aaagggcgat cgccgcgccg gccgacagcg ccatggcgac
     1261 ggcaaatgtc aacaaccggt cgcgcacccg gtcggccagt tggccgccta aaacggtacc
     1321 cgcgacattg cccagcgcga aaactgccag cgggatcgcc gtctcgacca gggagaggtg
     1381 gaacgtctct tgcaggaacg tggcgaagta gaccgcggcc agtccgtagc agatgcgctc
     1441 ggcgatgccg gtgccaagca ggcccaggac cttgggcggc agcgcggccc ggagcgaggg
     1501 ccgcaccatc ccgcgcaggt gccccgccgt gccgcgtccg accgtggcga acaggctgag
     1561 gctggcgacc aacgacatgg cgccgacgca gatcagccag ccgcgccagc cgatcagccc
     1621 gcccaccgca gccgccatcg gcacgccgac caccagggtg agcgactggc cgctcatcac
     1681 ccagcccaac gcgcgaccgc gctggccgtc gggcacgcgc cccgagacct cggcgaagac
     1741 cacgcccatg aaggcgccgg cgcagccgcc gcccacc
//
LOCUS       DASWGA010000512         3595 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1201766, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000512 DASWGA010000000
VERSION     DASWGA010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3595
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1201766"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VF991_12190"
     CDS             complement(<1..197)
                     /locus_tag="VF991_12190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006338167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9557250.1"
                     /translation="MQLLVPSLAHLDAYADALQRGWSPDNVRLEEAAREELARIADDP
                     AAFVARLDDREAKSGPVSLPDG"
     gene            306..542
                     /locus_tag="VF991_12195"
     CDS             306..542
                     /locus_tag="VF991_12195"
                     /inference="COORDINATES: protein motif:HMM:NF015807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Arc family DNA-binding protein"
                     /protein_id="HEX9557251.1"
                     /translation="MPVNLSIKNAPEKVVRKLKKRAERNHRSLQGELMAIITEAAERP
                     QPLTLKELVERGRQRGLSSPSEAAAIVRADRDSR"
     gene            529..915
                     /locus_tag="VF991_12200"
     CDS             529..915
                     /locus_tag="VF991_12200"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX9557252.1"
                     /translation="MTRAEVVDASAVVAMVFAEPGSETLARQLEGRDLLAPPMMPYEV
                     ANALWVKVRRDPERRDALFGQFRDFLEVPFESCEVDLEAVASFGLQHGLTVYDASYIW
                     LAVSRDAGLVTLDRQMARIASLVLPR"
     gene            912..1529
                     /locus_tag="VF991_12205"
     CDS             912..1529
                     /locus_tag="VF991_12205"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX9557253.1"
                     /translation="MSSNAVLVLDIDGVVSLAQPGSVQPWYATLQADWGFSHDEMARD
                     FFRVDFLEVLRGRLDLYAALHPYLESKGLADRLDEFVAYWFEKDAVIDRDVLAQADAW
                     RRRTGGRCFAASNQEHHRVAYLREAAGLDAHFDEIVYSAALGVCKPDRVFFTSAQARM
                     GVAAAQAILFVDDAAANVDAARACGWRAMLYRGPESLALALASWG"
     gene            1531..2832
                     /locus_tag="VF991_12210"
     CDS             1531..2832
                     /locus_tag="VF991_12210"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9557254.1"
                     /translation="MVDAARSEGRHRVVIVGGGFGGLQAVTGLAGLPVDIALIDRRNY
                     HLFQPLLYQVATASLATSEIAWPIRYLVRRRPEVTTMLATVVGVDATARRVLLDDGRA
                     LPYDTLVLAAGARHAYFGHDEWEAFAPGLKTLEDATTVRRRLLLAFERAECESDPQER
                     AALLTFVIIGAGPTGVELAGTIAELARSTLQPDFRHIDTRTARVVLIEAGPRVLAGFA
                     EELSAYAQRSLERLGVEVELNQPVSECSPDGVVFGSRVLEARTIIWAAGVRASPAADW
                     LGAPADRAGRLMVLPDLTVPGWPEIFAIGDTVTIADPDGKPVPGIAPAAKQQGRYVAG
                     VIKSRLRGEATPPAFRYRHAGSLATIGKRLAVIDFGRIKLRGALAWWIWGFAHIYFLI
                     GLRNRLSVILSWLWIHMRDQRSARLITQGRQSTDSGEAAPR"
     gene            complement(2783..3472)
                     /locus_tag="VF991_12215"
     CDS             complement(2783..3472)
                     /locus_tag="VF991_12215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557255.1"
                     /translation="MLDFFGTIVAAALMVFVVTTLLVFIDVPRNAKLVVAALLGLWIG
                     VAAAAGAAGWLAISRPFPVMGIFVGAPLLAAAIAASWPAARQAMLGLPMPLMVGLNIG
                     RVFAFLFLMLLAEGRLSGPFPYSAAWGDIITGAAALPLLWLARTPDRHTAVFHLWNAF
                     GMLDLVLAIGFGVTSAANSPLQIFGAPGSEAMQYPPWSFVPTVLVPLWMILHAIIWVR
                     LRRYRYSAVPA"
BASE COUNT          591 a         1208 c         1196 g          600 t
ORIGIN      
        1 ccgtcgggca agctgacggg cccactcttg gcttcgcggt cgtcgagtcg cgccacaaag
       61 gccgccggat cgtcggcgat gcgcgccagt tcctcgcgcg cggcctcctc cagccgcaca
      121 ttgtccggcg accagccgcg ctgcagggcg tcggcatagg cgtcgagatg cgccagggag
      181 ggaacaagta gctgcacctg ggtttccttt cgggccgggc gtctagcata ttgcggccgt
      241 tgacgcgcgg tcatgccact cctaccatct catggttcca ttttgcctcc atattggagc
      301 catctatgcc agtcaatctg tcgatcaaga atgcccccga aaaagtcgtt cgcaagctca
      361 agaagcgagc cgagcgcaac caccgctcgt tgcagggcga gttgatggcg atcatcaccg
      421 aagcggccga aaggccgcaa ccactgacgc tgaaggaatt ggtggaacgt ggccgccagc
      481 gaggcctgtc gtcgccatcg gaagccgccg ccatcgtccg agcggatcgt gactcgcgct
      541 gaagtcgtcg acgcttctgc ggtcgtagcc atggtgtttg ccgagccggg ctcggagaca
      601 ttggcgcgcc agcttgaagg gcgcgacctg ctcgctccgc caatgatgcc gtacgaggtg
      661 gccaacgctc tctgggtcaa ggtccgccgg gatccggagc ggcgcgatgc tctgttcggg
      721 caatttcgcg acttcctcga ggtgcccttc gagagctgcg aggtggatct ggaagcggtc
      781 gcgagcttcg gcctgcaaca cggtttgacg gtttacgatg cgagctatat ctggctggcc
      841 gttagccggg acgccggact tgtcacgctc gatcgccaga tggcgcgcat cgcctccctc
      901 gtgctgcccc gatgagttcc aacgccgtcc tcgtcctcga catcgatggc gtcgtctcgc
      961 tcgcccaacc gggctcggtg cagccctggt acgcgacgct gcaggccgac tggggtttta
     1021 gtcacgacga aatggcgcgc gacttcttcc gcgtcgattt tctcgaagtg ctgcgcggcc
     1081 gtctcgacct ctacgccgcg cttcacccct acctcgaatc caaggggctg gccgaccggc
     1141 tggacgagtt cgtcgcctac tggttcgaaa aggacgccgt catcgaccgc gacgtgctgg
     1201 cccaggccga tgcctggcga cggcgcacgg gcgggcgctg cttcgcggcg tccaaccagg
     1261 agcatcatcg cgtcgcctat ctgcgcgagg cggcggggct cgacgcgcat ttcgacgaga
     1321 tcgtctactc ggcggcgctg ggcgtgtgca agccggaccg cgtgttcttc accagcgccc
     1381 aggcgcgcat gggcgtggcg gcggcacagg cgatcctgtt cgtcgacgat gccgcggcca
     1441 acgtcgacgc ggcccgcgcc tgcggctggc gggccatgct ttatcgcgga ccggagagcc
     1501 tcgcgctcgc gttggcgagc tggggctagc ttggtggatg cagcccgctc cgaagggcgc
     1561 catcgcgttg tcatcgtcgg cggcggcttc ggcggcctgc aggcggtcac cggccttgcc
     1621 ggactgccgg tcgacatcgc gctgatcgac cggcgcaact accacctttt tcagccgctg
     1681 ctctatcagg tcgcgaccgc gtcgctggcg acctcggaaa ttgcctggcc catccgttac
     1741 ctcgtgcgtc ggcgaccgga ggtgacgacc atgcttgcca ccgtggtcgg cgtggacgcg
     1801 acggcgcgcc gagtgctgct cgatgacggt cgcgccttgc cctacgatac gctcgttctc
     1861 gcggccggcg cccgccacgc ctatttcggt catgacgaat gggaagcctt tgcgcccggc
     1921 ctgaagacgc tggaagacgc cacgaccgtc cgccggcggc tcctgcttgc cttcgagcgg
     1981 gcggaatgcg agagcgatcc tcaagagcgc gccgcgctcc tgaccttcgt catcatcggc
     2041 gccggcccga ccggcgtcga actggccggc accatcgccg aactggcccg gtccaccttg
     2101 cagccggact tccgtcacat cgatacaagg acggcgcgcg tcgttctgat cgaggccggg
     2161 ccgcgcgtgc tggcgggctt cgccgaggag ctctcggcct atgcccagcg ctcgctcgaa
     2221 cgcctgggcg tcgaagtcga actcaatcaa cccgtctccg aatgctctcc tgacggggtc
     2281 gtcttcggaa gccgggttct ggaggccagg accatcatct gggccgccgg tgtcagggcg
     2341 tcgccggcgg ccgactggct cggcgcaccg gccgatcgcg ccgggcggct catggttctc
     2401 cccgacctca ccgtgccggg ctggccggaa atctttgcca tcggcgacac ggtgacgatc
     2461 gccgatcccg atggaaagcc ggtcccgggc attgcgcccg ccgccaaaca gcaagggcgc
     2521 tacgtcgctg gggtcatcaa aagccgcctg cgcggcgagg cgacgccccc tgcctttcgc
     2581 taccggcacg ccggcagcct ggccacgatc ggcaagcgac tggcggtcat cgatttcggc
     2641 cgtatcaagc tgcgcggggc cctcgcctgg tggatctggg gcttcgcgca catctatttt
     2701 ctcatcggcc tgcgcaaccg gctgagcgtt atcctcagct ggttgtggat tcacatgcgc
     2761 gatcagcgca gcgcgcgcct gatcacgcag ggacggcaga gtaccgatag cggcgaagcc
     2821 gcacccagat gatggcgtgc aggatcatcc agagcggcac cagaaccgtc ggcacgaacg
     2881 accacggcgg gtactgcatg gcttccgagc cgggggcgcc gaatatctgc agcggcgaat
     2941 tcgccgccga ggtgacgccg aagccgatgg ccagcaccag gtcgagcatg ccgaaggcgt
     3001 tccacaggtg gaacacggcg gtgtgcctgt ccggggttcg ggcgagccac agcagcggca
     3061 gcgccgcggc gccggtgatg atgtcgcccc aggcggcgga gtaagggaac gggcccgata
     3121 gccggccctc ggccaacagc atgaggaaca gaaaggcgaa gacccggccg atattgaggc
     3181 cgaccatcag gggcatcggc agaccgagca tcgcctgacg cgcggccggc caagaggcgg
     3241 cgatcgcggc ggcgagaagg ggcgcgccca cgaagattcc catgacaggg aatggccttg
     3301 agatcgccag ccatccggcc gcgccggccg ccgcggcaac gccgatccac aggccgagca
     3361 gggcggccac gaccagcttg gcgttgcgcg gaacatcgat gaatacgagc agcgtggtga
     3421 cgacgaaaac catcaaggcc gccgccacaa tcgtcccgaa gaaatcgagc attgggtcct
     3481 ccaatcgttg cggtggaggg tcccgcgcgg caaaagatgt tcaacatcat cttttgcgtg
     3541 ccactatccc tgaacgtctc gcgacggagg acgacatgcc ctattccgcc aagca
//
LOCUS       DASWGA010000513         1844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2087462, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000513 DASWGA010000000
VERSION     DASWGA010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2087462"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="VF991_12220"
     CDS             <1..593
                     /locus_tag="VF991_12220"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEX9557256.1"
                     /translation="TALEELRAALNAENRPDRPRLTLMPFLMQALVKAVADFPEMNAL
                     YDDEAETLERHGGVHIGIATQTPAGLMVPVVRHCEARGLWDCAAEVQRLAEAAREGRA
                     TRAELSGSTITITSLGALGGIVTTPVINRPEVAIIGPNKQVVRPVWQGGQFVPRTMMN
                     LSSSFDHRVIDGYVAARFVQRIKGLIEAPATIFMEA"
     gene            595..>1844
                     /gene="lpdA"
                     /locus_tag="VF991_12225"
     CDS             595..>1844
                     /gene="lpdA"
                     /locus_tag="VF991_12225"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004688981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX9557257.1"
                     /translation="MAEIAAKVLVVGGGPGGYVCAIRAGQLGLDVVLVEHGGADGGLG
                     GTCLNVGCIPSKAIIHAADAYGRALEQAKSAPFGLRVEHPTIDFARTVDWKDGIVGRL
                     TSGVGALLKRHRVKIVQGHAVMVDGKTCRVETDTGPQVIRAEHVVLATGSMPASLPAL
                     PFGGRVISSTEALSLEAIPERLAVVGAGYIGLELGTAFAKLGAKVTVIEAEDRILPVY
                     DAELARPVARRLQALGVEVLTRARAVGLSDSGDAVRVERQGAAPRSIPADRILVATGR
                     RARVTDFGLERLDLTMNGAFVAIDERCATSMRNVWAVGDLTGEPMLAHRAMAQGVVVA
                     EQIAGHRRVFDGAVIAAVCFTDPEIVTVGLSPEEARKAGREVHTALFPFQANGRALTL
                     GAEDGFVRVTARADNHLLLGIAAVG"
BASE COUNT          254 a          655 c          653 g          282 t
ORIGIN      
        1 tcaccgcgct ggaagagctg cgcgcggccc tgaacgcgga gaaccgcccg gatcgcccgc
       61 ggctcacgct gatgccgttc ctgatgcagg cgttggtcaa ggcggtcgcc gactttcccg
      121 agatgaacgc gctctatgac gacgaggcgg agacgctgga gcgccatggc ggcgtccata
      181 tcggcatcgc cacgcagacg ccggcgggac tcatggtgcc cgtcgtccgc cactgcgagg
      241 cgcgcgggct gtgggattgc gccgccgagg tccagcgcct ggccgaggcc gcgcgcgagg
      301 gcagggcgac ccgcgccgaa ctttccggct cgaccatcac catcaccagc ctgggcgcgc
      361 tcggcggcat cgtcaccacg ccggtgatca accggccgga ggtcgccatc atcggcccca
      421 acaagcaggt cgtgcgcccg gtctggcagg gcggccagtt cgtgccgcgc accatgatga
      481 atctgtcgtc gtccttcgat caccgcgtca tcgacggcta cgtcgcggcg cgcttcgtcc
      541 agcgcataaa aggcctgatc gaagcgccgg cgacgatttt catggaggca tgagatggcc
      601 gagatcgctg ccaaggtgct ggtcgtgggc ggtgggccgg gcggctacgt ctgcgccatc
      661 cgcgccggcc agctcggcct cgatgtcgtg ctggtcgagc atggcggggc ggacggcggg
      721 ctgggcggca cctgcctcaa tgtcggctgc attccgtcga aggcgatcat ccatgccgcc
      781 gacgcctacg gtcgcgccct cgagcaggcg aagtccgcgc cgttcggcct cagggtcgag
      841 catccgacca tcgacttcgc gcgcaccgtc gactggaagg acggcatcgt cggtcgcctc
      901 accagcggcg tcggcgcgct gctgaagcgc caccgggtca agatcgtgca gggccacgcc
      961 gtgatggtcg acggcaagac ctgccgggtc gagaccgaca ccggcccgca ggtcatcagg
     1021 gccgagcatg tcgtgctggc gaccggctcg atgccggcca gcttgcccgc gctgccgttc
     1081 ggcggccgcg tcatctcctc gaccgaggcc ctgtcgcttg aggcgattcc cgagcgcctg
     1141 gccgtggtcg gcgcgggcta tatcggcctc gagctcggga cggcgttcgc caagctcggc
     1201 gccaaggtca cggtgatcga ggcggaggat cgcatcctgc cggtctacga cgccgagctc
     1261 gcccgtccgg tcgcccgccg cctgcaggcg ctgggcgtag aggtcctgac gcgggcccgc
     1321 gccgtcggcc tgtccgactc aggcgacgcg gtgcgggtcg agcggcaggg tgcggcgccg
     1381 cgcagcatcc cggccgaccg catccttgtc gccaccggcc ggcgcgcccg tgtcacggac
     1441 ttcggtctcg aacggctcga cctcaccatg aacggcgcct tcgtggcgat cgacgaacgc
     1501 tgcgccacct cgatgcgcaa cgtctgggcg gtcggcgacc tcaccggcga gccgatgctg
     1561 gcccatcgcg ccatggccca gggcgtggtg gtcgccgagc agatcgccgg ccatcgccgc
     1621 gtcttcgacg gcgcggtgat tgccgctgtg tgtttcaccg atccggagat cgtcaccgtc
     1681 ggcctctcgc ccgaggaggc gcgcaaggcc ggccgcgagg tgcacactgc cctgttcccg
     1741 ttccaggcca acggccgggc cttgacgctg ggcgcggagg acggcttcgt gcgcgtgacc
     1801 gcacgggctg acaatcacct gcttctcggc atcgccgcag ttgg
//
LOCUS       DASWGA010000514         4328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_692701, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000514 DASWGA010000000
VERSION     DASWGA010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4328
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692701"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VF991_12230"
     CDS             <1..376
                     /locus_tag="VF991_12230"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HEX9557258.1"
                     /translation="SSAVVILVDTSIWVDHLRTGNQQLTALLEAGRVLAHPFVIGELA
                     LGRLNPRNTILAALADLPQARVATDREVLEFIELQALAGLGVGYVDVHLLAAARLSED
                     ASLWTSDRRLHAIAGRLALAAT"
     gene            471..1454
                     /locus_tag="VF991_12235"
     CDS             471..1454
                     /locus_tag="VF991_12235"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9557259.1"
                     /translation="MRIKAALFGVVLAVAGIGQAAAQSPDKFPDKPIRIMAPYAPGGN
                     IDVTARIIADKLKDVLGVTVLVENKAGASGMIGSDAIARSAPDGYNLLVSANSLVAVP
                     VIYGNAPYDWKTAFQPISHIQAVPAVLVVHPDSAIKTLADFVRIGRETPGKLAIADSG
                     VGTTNHIVIELLSDATAAKYTLVHYKGSGAASIDVIAGQVQVQVDQVNSALGHIKAGK
                     LRAIAISSDKRLPELPDVPTMKESGIKELSDFTYSTYTGLFGPAKMPTEVLAKLHAAM
                     VKVLTDPATIKRFADLTAEAKPSTPQELAAMLDKEDRTVVPLIKKLGIKPE"
     gene            1463..1825
                     /locus_tag="VF991_12240"
     CDS             1463..1825
                     /locus_tag="VF991_12240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008039858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family protein"
                     /protein_id="HEX9557260.1"
                     /translation="MIWLPPAIRPIFLLLISNFFMTFAWYGHLKFTERPLWLVVVASW
                     SIAFIEYCFAVPANRWGHVVYSAAELKTMQEVITLSVFAAFSVFYLGERITLNHLVGF
                     AFICAGAFFVFRGPLPSW"
     gene            1890..3680
                     /locus_tag="VF991_12245"
     CDS             1890..3680
                     /locus_tag="VF991_12245"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX9557261.1"
                     /translation="MAEPPTGRWRARQWREGAALAAVLLVAAILRLWRLEDNGFGTAY
                     YAAGVRSMLQGFWLFFYNAFDPAGFISLDKPPLAFWIQTAFASVLGYDGWTIHLPQAL
                     AGIASVGLLYRLVRQPFGVAAGLCAALLLALMPIAVAVDRSNNTDSWLVFFLLLAAAT
                     ALRGRGLSLVAAMALLGLAFNVKMLAALVCGPALLAGWLFASPLDWRRRLGWMAAAGI
                     TLVVVSLAWAAAFDLTPKDLRPYAGSSHDNSMLELIVIHNGLERFVRPPRTPPAPAQA
                     AAPAPRFELYDSVPVGPLRLAHPTLAAQFAWTLPLAVLGAVLGWRRRRASVALWSVWA
                     LTYGIVFSAAGGIFHAYYLSALASPLAALAGIGCFELWRRGSGHLALGLGVTALWQGY
                     IAGAALGWDATWIGFPLVALAASVAAVWRAKRPPALIGAIALLVLPAMWALSAVFAPG
                     SLTLPSSSLARWLGIDDGRGPLLSRSYRPLTDDPKLHAFLRDHRGAAPFLLAAPNALL
                     AAPVIIQTGQPVMAFGGFFGDDPVMSVDDFAKRVEQGEVRFVVLSANRRMRDFERWVR
                     AHGKPVDPDLWRSLPPEPRRTIALYDLAPR"
     gene            complement(3692..>4328)
                     /locus_tag="VF991_12250"
     CDS             complement(3692..>4328)
                     /locus_tag="VF991_12250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HEX9557262.1"
                     /translation="AALAVSFAIKRLVWHGAPGEPFMLELPDYKLPRLKSLAIGLWTR
                     AAIFLKRAGTTILAMMVLIWLLASFPQPPEGASGPAISYSAAAMIGSALQPITEPLGF
                     NWQINVALIPGMAAREVAVGALGTIYAIDGGEGVADKIGQAIAGQWSLATALALLAWY
                     VFAPQCASTLAVIRRETGSWKWMWVTFAYMLGLAYAAALATYQIARALGGG"
BASE COUNT          626 a         1533 c         1413 g          756 t
ORIGIN      
        1 gtccagcgcg gtcgtgatcc tcgtcgatac ctcgatctgg gtcgaccatt tgcgcacggg
       61 caaccagcag cttacggctc tcctcgaagc tggccgagtc ctggctcatc ccttcgtcat
      121 cggcgaactc gcgctgggcc ggttaaatcc gcgcaacacc attcttgccg ctttggcgga
      181 tttgccgcag gcccgcgtcg cgaccgatcg ggaagtcctg gaattcattg agcttcaagc
      241 tctggccggg ctcggcgtcg gatacgtcga tgtccacctg ctggcggcgg cccgactgag
      301 cgaggacgcg tcgctttgga caagcgacag gcgtcttcat gcgatcgcgg gccgcttggc
      361 tttggcggcg acttgacgct gatccgcgac gcaacggacc gtgcgctttc gataggctgc
      421 caggcgccgc cgaactaagt tgacccggga aatttcaggg aaggacgatc atgcgcatca
      481 aagccgcgct tttcggcgtt gtactggccg tggccggcat cggtcaggcg gcggcccaga
      541 gtccggacaa atttcccgac aagccgatcc gcatcatggc gccctatgcg ccgggcggga
      601 acatcgacgt caccgcgcgc atcatcgccg acaaactgaa ggacgttttg ggcgtcaccg
      661 tcctggtcga gaacaaagcc ggcgccagcg gcatgatcgg cagcgacgct atcgcccgct
      721 ccgctcccga cggctacaac ctcctggtct cggccaactc tctggtggcc gtgccggtga
      781 tctacggcaa tgcgccctac gactggaaga cggcgttcca gccgatcagc cacatccagg
      841 cggtgcccgc cgtgctggtg gtgcacccgg actcggccat caagaccctc gccgacttcg
      901 tcaggatcgg ccgcgagacg ccgggcaagc tcgccatcgc cgattccggc gtcggcacca
      961 ccaaccacat cgtgatcgag cttttgagcg atgcgaccgc agcgaagtac acgctggtcc
     1021 actacaaggg cagcggcgcg gcatcgatcg acgtcatcgc gggccaggtg caagtgcagg
     1081 tcgaccaggt caacagcgcc ctcggccaca tcaaggcggg caagctccga gcgatcgcca
     1141 tcagctccga caaacgcctg cccgagttgc ccgacgtgcc gaccatgaag gagtccggca
     1201 tcaaggagtt gagcgacttc acctacagca cgtacaccgg cctgttcggt ccggccaaga
     1261 tgccaaccga ggtgctggcc aagctgcacg ccgcgatggt gaaggtgctg accgaccccg
     1321 ccaccatcaa gcgcttcgcc gatctcacgg ccgaggccaa gcccagcacg ccgcaggaac
     1381 tggcggccat gctcgacaag gaggaccgca cggtggtccc gctgatcaag aaactcggca
     1441 tcaaaccgga gtagaccgac taatgatctg gctgcccccc gccatccgtc ccatattttt
     1501 gctgctgatc tccaacttct tcatgacctt cgcctggtac ggccacctga aattcaccga
     1561 acggccgctc tggctggtgg tggtggcaag ttggagcatc gccttcatcg aatattgctt
     1621 cgccgtgccg gccaaccgct ggggccatgt ggtctattca gcggccgagc tcaagaccat
     1681 gcaggaggtc atcacgctct cggtgttcgc cgccttctcg gtgttctatc tcggcgagcg
     1741 catcaccttg aaccacctcg tgggcttcgc cttcatttgc gccggcgctt tcttcgtatt
     1801 caggggcccg ctgccgtcct ggtgaaaatg ccgttccgat ccgggatgat cctcgctcat
     1861 tctgcgtaag cccttcgggg gaacggcgat tggcggaacc accgaccgga cgatggcgtg
     1921 ccagacaatg gcgtgagggt gcagcgctcg ccgccgtgct gctggtcgca gccatcctgc
     1981 ggctgtggcg gctggaggat aacggcttcg gcaccgccta ctacgccgcc ggcgtgcgca
     2041 gcatgctgca gggcttctgg ctgttcttct acaacgcctt cgatcccgca ggcttcatct
     2101 ccctcgacaa gccgccgctc gccttctgga tccagacggc tttcgcctcg gtgctgggct
     2161 acgacggctg gacgatccac ctgccgcagg cgctggccgg catcgcctcg gtgggcctgc
     2221 tctatcgcct ggtgcgccag ccgttcggcg tggcggccgg gctatgcgcc gccttgctgc
     2281 tggcgctcat gcccatcgcc gtcgccgtcg accgctccaa caacaccgat tcctggctgg
     2341 tcttcttcct gctgctggcc gcggcgacgg cgctgcgcgg gcgcggcctc tccctcgtcg
     2401 cggcgatggc gctgctgggc ctggccttca acgtcaagat gctggccgcc ctggtctgcg
     2461 ggccggcgct gctcgcgggc tggctgttcg ccagcccgct cgactggcgc cggcggctcg
     2521 gctggatggc ggcagccggg atcaccctcg tcgtggtgtc gctcgcctgg gcggcggcgt
     2581 tcgacctcac gcccaaggac ctcaggccct acgccggcag cagccacgac aattccatgc
     2641 tcgagctgat cgtcatccat aacgggctgg agcgcttcgt gcgcccgccg cgaacgccgc
     2701 cggctccggc acaggccgcc gcgccggcgc cgcgcttcga gctctacgat tccgtgccgg
     2761 tcggcccgct acggctggcg catccgaccc tggcggcgca attcgcctgg accctgccgc
     2821 tcgccgtgct gggcgcggtc ctcggatggc gccgccggcg cgcgtcggtg gcgctatgga
     2881 gcgtctgggc gctcacctac ggcatcgtct tcagcgccgc cggcggcatc ttccacgcct
     2941 attatctttc cgccctggcg tcgccgctgg cggcgctggc cggcatcggc tgcttcgagc
     3001 tgtggcgccg cggctcgggg catcttgcgc tcggtctcgg cgtcaccgcc ttgtggcagg
     3061 gctatatcgc cggcgccgcg ctaggctggg acgcgacctg gatcggcttt cccctggtgg
     3121 ccctggccgc gagcgtcgcg gcggtgtggc gcgccaagcg gccgcccgcc ttgatcggcg
     3181 ccatcgccct tctcgtcctg ccagcgatgt gggcgctgag cgcggtgttc gcgccgggca
     3241 gcctgacgct gccctcgtcg agcctggcgc gctggctcgg catcgacgac ggccgcgggc
     3301 cgctgctgtc gcgcagctac cggccgctga ccgacgatcc caagctgcac gcctttctcc
     3361 gggaccatcg cggcgcggcg cccttcctgc tggccgcacc caatgcgctg ctggccgcgc
     3421 cggtcatcat ccagaccggc cagcccgtca tggcgttcgg cggcttcttc ggcgacgacc
     3481 cggtgatgag cgtcgatgac ttcgccaagc gggtcgaaca gggcgaggtg cgcttcgtgg
     3541 tgctgtccgc caaccgccgc atgcgcgact tcgagcgctg ggtgcgcgcc catggcaaac
     3601 ctgtcgatcc cgatctgtgg cgctcgctgc cgcctgagcc gcggcgcacg atcgcgcttt
     3661 atgacctggc gccgcgctag ccggcgcgcc ctcagcctcc gccgagcgcc cgggcgatct
     3721 ggtaggtcgc cagcgccgcc gcataggcca gccccagcat gtaggcgaag gtgacccaca
     3781 tccatttcca gctgccggtc tcgcggcgga tcacggccag ggtcgaggcg cattgcggcg
     3841 cgaacacgta ccacgcgagc agcgccagcg ccgtggcgag gctccattgg ccggcgatcg
     3901 cctggccgat cttgtcggcc acgccttcgc cgccgtcgat ggcatagatg gtgccgagcg
     3961 cgccgaccgc gacttcgcgc gccgccatgc cggggatcag cgccacgttg atctgccagt
     4021 tgaagcccag cggctcggtg atcggctgca gcgccgagcc gatcatggcg gccgcgctgt
     4081 aggagatcgc gggcccgctg gcgccttccg gcggctgcgg aaacgaggcg agcagccaga
     4141 tcagcaccat catggccagg atggtggtgc cggcgcgctt gaggaagatg gcggccctcg
     4201 tccacagccc gatcgccagg ctcttgagcc gcggcagctt gtagtcgggc agctcgagca
     4261 tgaagggctc gcccggcgcg ccgtgccaga ccaggcgctt gatggcgaag gagaccgcga
     4321 gcgcggcc
//
LOCUS       DASWGA010000515         3592 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2087633, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000515 DASWGA010000000
VERSION     DASWGA010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3592
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2087633"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1699
                     /locus_tag="VF991_12255"
     CDS             <1..1699
                     /locus_tag="VF991_12255"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9557263.1"
                     /translation="LEFDAPDGPSVILRTIEGEGAARRETWWFEMPDGSRSPARSRPL
                     DFDPRKRLWYVDALRAKAPVLTEPYRFAQANVVGVSAGVPLRHGGVVGFDFTLNTLSS
                     LIGDYKITPNSVIMIASETGVVFMESEACRIERTECLAGEDEVRAAMRREIAQSTGGQ
                     RVERDAMMAGRDYRLLVHSMPPTLGRRFLIAAAVPFVELSADSRLLVQSAAIAAAIAV
                     GLAALGALLAALLLSRSISRIAGKTERIRSLDFSDRAPVESRITEIVRLSQSVERMRE
                     GLEVFGRYVSKNLVQQIMRSPETAGVGGTRREITVMFTDIEGFSRLSETMEPELLTDR
                     LSRYFDALGSAITANRGTIDKYIGDSIMAFWNAPERDADHIANACRAALQACAASNQL
                     SAKWRSRGRPGFRTSFGLHTGLAVVGNVGARERINYTLVGAVANQASRLEGLNKAYRT
                     EILASGEIAGATADRFVWRHIDRIVAAGTTEQHDIHEPLGEIDSAPEHAEFLAKWQAA
                     HAAYREGRFEVALAGFRAAASLRPEDGPSLVFIERCAAFLKEGTSQGWDGTWHFDRK"
     gene            complement(1703..>3592)
                     /locus_tag="VF991_12260"
     CDS             complement(1703..>3592)
                     /locus_tag="VF991_12260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEX9557264.1"
                     /translation="APRSGFYFGDHVGYMFGSANATLGDPIGVASAGGTSGYGTFFGG
                     AQAGYEHFFASRLMLGAELDMSFADSRDLAQVLSYRATSAGTANEQLEYLASLRGRAG
                     YAMGAWTPFVTGGIAWASTRFSRTDLTTGNEDANPGNVRLGYVVGGGLDYRLDSRWST
                     RAEYLYTNLGLSGFLFGSAPARYDSQVDLHRFRVGLNYKFGDVDDKKDKTDDRGPGTW
                     ELHGQTTFIFQGYPAFNAPYSGANSLPPLGQSRETWTVSAFLGVRLWQGGELYYNPEL
                     LQGFGIANTTGAAGYPNGEAQKSNFPFPRYNTSRLFLRQEIGLGGEREKVEGEYGQLS
                     GERDVSRVTLQFGKYSIKDLFDGNDYAEDPRLDFLNWSIWASGAFDYPADRLGLTWGF
                     TAELNQPRWAVRAGYFLVGNQPNANTFDMALFSRGGYVGELELRFKPYDRPGTLRLGS
                     WLTSTFSGSYNQAVALAALDPGLTANDTIAQTRQGRTKYGFYLNLQQELSDDVGLFAR
                     FSWNDGRNEISAFTDIDTSLSAGLSIRGTAWGRPDDRVGIAGAWNNISADHSGYLAAG
                     GLGVLVGDGALTYASENVIETYYAFQLAKGIVASADYQFLGNPAYNAVRGPVHVFSGR
                     LSARF"
BASE COUNT          583 a         1200 c         1248 g          561 t
ORIGIN      
        1 cctcgaattc gacgcaccgg acgggccttc cgtgatcctg cgcacgatcg agggcgaagg
       61 cgcggcgcgg cgcgagacct ggtggttcga gatgcccgac ggcagccgca gccccgcccg
      121 gtcgcgcccg ctcgacttcg acccgcgcaa gcggctctgg tacgtcgacg cgctcagggc
      181 caaggcgccg gtgctgaccg aaccctaccg cttcgcccag gccaatgtcg tcggggtgtc
      241 ggccggcgtg ccgctgcgcc acggcggcgt ggtcggcttc gacttcacgc tgaacacgct
      301 ctccagcctg atcggcgact acaagatcac gcccaactcc gtcatcatga tcgccagcga
      361 aaccggcgtc gtcttcatgg agtcggaggc ctgccgcatc gagcgcaccg aatgcctggc
      421 cggcgaggac gaggttcgcg ccgccatgcg ccgcgagatc gcgcagtcga ccggcggcca
      481 gcgcgtggaa cgcgacgcca tgatggccgg ccgggactac cggctgctgg tgcacagtat
      541 gccgccgacg ctcggaaggc gcttcctgat cgccgccgcc gtgccgttcg tcgagctttc
      601 cgccgattcg cgcctgctcg tgcaaagcgc cgccatcgcc gcggcgatcg cggtcggact
      661 ggccgccctc ggcgcgctgc tcgcggcgct gttgctgtcg cgctcgatct cgcgcatcgc
      721 cggcaaaaca gagcgcatcc gcagcctcga cttctccgac cgcgcgccgg tcgagagccg
      781 catcaccgag atcgtgcggc tgtcgcaatc cgtcgagcgc atgcgcgagg gcctcgaggt
      841 gttcggccgc tacgtctcga aaaacctcgt gcaacagatc atgcgctcgc ccgagaccgc
      901 cggcgtcggc ggcacgcgcc gcgagatcac ggtgatgttc accgacatcg agggcttctc
      961 gcgcttgagc gagaccatgg agccggagct tctgaccgac cggctgtcgc gctatttcga
     1021 tgcgctgggc tcggcgatca cggccaatcg cggcacgatc gacaagtata tcggcgacag
     1081 catcatggcg ttctggaacg cgcccgagcg cgacgccgac cacatcgcca atgcctgccg
     1141 cgccgcgctg caggcctgcg cggcgtcgaa ccagctctcc gcgaaatggc gcagtcgcgg
     1201 acgaccgggc tttcgcacca gcttcggcct gcataccggc ttggcagtgg tcggcaatgt
     1261 cggcgcgcgc gagcgcatca actacaccct ggtcggcgcg gtggcgaacc aggcgtcgcg
     1321 gctggagggc ctcaacaagg cctaccgcac cgagatcctg gcgagtggcg agatcgccgg
     1381 cgccacggcc gaccgcttcg tctggcgcca catcgatcgc atcgtcgccg ccggcacgac
     1441 cgagcaacac gacatccacg agccgttggg tgagatcgac agcgctcccg agcacgccga
     1501 attcctcgcc aagtggcagg ccgctcacgc cgcctaccgg gaaggccgct ttgaggtggc
     1561 actcgcaggc ttccgcgccg ccgcgtcgct caggcccgag gacgggccaa gcctagtctt
     1621 catcgaacgc tgcgcggcct tcctcaagga gggcacgtcc caaggctggg acggcacttg
     1681 gcacttcgac aggaagtagg gatcagaatc gggccgacag ccgtccgctg aacacgtgca
     1741 ccgggccgcg cacggcgttg taggcgggat tgccgaggaa ctggtagtcg gcgctggcga
     1801 cgatgccctt ggcgagctgg aaggcatagt aggtctcgat gacgttctcc gaggcgtagg
     1861 tcagtgcacc gtcgccgacc agcacgccga ggccgccggc cgcgaggtag ccgctatggt
     1921 cggccgagat gttgttccag gcgccggcga tgccgacgcg gtcgtccggc cggccccacg
     1981 ccgtgcccct gatcgagagg ccggccgaca ggctggtgtc gatgtcggtg aaggcgctga
     2041 tctcgttgcg cccgtcgttc cagctgaatc tcgcgaacag gccgacatcg tcgctgagct
     2101 cctgctggag gttgaggtag aagccgtact tggtgcggcc ctggcgggtc tgcgcgatgg
     2161 tgtcgttggc ggtcaggccg ggatcgagag ccgcaagcgc gacggcctgg ttgtaggagc
     2221 ccgaaaaggt gctggtgagc cagctgccca gccgcagcgt gccgggccgg tcgtagggct
     2281 tgaagcgcag ctcgagctcg ccgacataac cgccgcgtga gaacagggcc atgtcgaagg
     2341 tgttggcgtt gggctggttg ccgaccagga aatagcccgc gcgcaccgcc cagcgcggct
     2401 ggttgagctc ggcggtgaag ccccaggtga ggcccagccg gtcggcgggg tagtcgaagg
     2461 cgcctgaagc ccagatcgac cagttgagga agtcgagccg cggatcctcg gcgtagtcat
     2521 tgccgtcgaa caggtccttg atcgaatatt tgccgaactg cagcgtgacc cgcgacacgt
     2581 cgcgctcgcc cgagagctgg ccgtactcgc cctcgacctt ctcgcgctcg ccgcccagcc
     2641 cgatctcctg gcgcaggaaa agccgcgagg tgttgtagcg cggaaaaggg aagttcgact
     2701 tttgcgcctc gccgttggga tagcctgccg caccggtggt gttggcgatg ccgaagccct
     2761 gcagcagctc gggattgtag tagagctcgc cgccctgcca cagccggacg ccgaggaagg
     2821 ccgacaccgt ccaggtctcg cggctctgac cgagcggcgg caggctgttg gccccgctgt
     2881 agggcgcgtt gaaggccggg tagccctgga agatgaaggt ggtctggccg tgcagctccc
     2941 aggtgccggg tccgcggtcg tcggtcttgt cctttttgtc gtcgacgtcg ccgaacttgt
     3001 agttgaggcc gacgcggaag cggtgaaggt cgacttgtga atcgtagcgc gccggcgccg
     3061 agccaaagag gaagccgctg aggccgaggt tggtgtagag atattcggcc cgcgtcgacc
     3121 agcgtgaatc gagccggtag tcgaggccgc cgcccaccac gtagcccagc cgcacattgc
     3181 ccggattggc gtcctcgttg ccggtggtga gatcggtgcg cgaaaaccgc gtgctcgccc
     3241 aggcgatgcc gccggtgacg aacggcgtcc aggcgcccat cgcgtagccg gcacgaccgc
     3301 gcaggcttgc caggtactcg agctgctcgt tggccgtgcc ggcgctcgtc gcgcggtagg
     3361 acaggacttg cgccagatcc cgggagtcgg cgaacgacat gtcgagttcg gcgcccagca
     3421 tcaggcgcga ggcgaagaaa tgctcgtagc ccgcctgcgc gccaccgaag aaagtgccgt
     3481 agccgctggt gccgccggcc gaggcgacgc cgatcggatc accgagtgtg gcattggcgc
     3541 tgccgaacat atagccgaca tggtcgccga aatagaaacc cgagcgcggt gc
//
LOCUS       DASWGA010000516         2069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1202271, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000516 DASWGA010000000
VERSION     DASWGA010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1202271"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(817..>2069)
                     /gene="hutU"
                     /locus_tag="VF991_12265"
     CDS             complement(817..>2069)
                     /gene="hutU"
                     /locus_tag="VF991_12265"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HEX9557265.1"
                     /translation="IGSQGIVQGTYETFVEMARQHYGGSLAGRWILTAGLGGMGGAQP
                     LAATMAGASCLAVECRPSSIEFRLRTGYVDRQARDLDEALSIIAKASAEKKAVSVALL
                     GNAADVLPELLRRGVRPDCLTDQTSAHDPINGYLPRGWTLAEWEAKRTSAPDAVAKAA
                     KQSMAGHVRAMLEFHKLGVPTVDYGNNIRQMALEEGVADAFSFPGFVPAYIRPLFCRG
                     IGPFRWVALSGDPEDIYRTDAKVKELMPDNRHLHTWLDMARQRIKFQGLPARICWVGL
                     GDRHRLGLAFNDMVATGELKAPIVIGRDHLDAGSVASPNRETEAMRDGSDAVSDWPLL
                     NGLLNCASGATWVSLHHGGGVGMGFSQHAGMVIVCDGTPEAARRIERVLWNDPASGVM
                     RHADAGYEDAIACAREKGLKLLNI"
BASE COUNT          353 a          714 c          673 g          329 t
ORIGIN      
        1 ccctgtttca gcgcttccgg caaccgtagc gcgcgacacc tcccggccgg cgcaactggc
       61 ataacgcatc acgactgaca gcgacgcgca taccaccgcg acacccacgg ccaagtgtcg
      121 agcaaggacc acgagtgcga caagccgcac gcgacttaac ggacacagcg acgaagacag
      181 tggcagctcg tgtgcgatgc atggcgccgc gacgcgccct cgcacgactc gatggcgaag
      241 atgcgtccgt agagatcaac tgtgccgtgt gctttttttg tcgcgccaag caagaagcct
      301 gccatcgctt cgcatcggcc gtgaaaaaga aagcgttata ccaaaatgga ataacggtgc
      361 gttcgcacgc agcaaccggc acggcccttt gccgttggaa tcgcaccaac aacgaggtgt
      421 gtccatgaaa cccctcctgc caatcatcgc catggtcatt gcctgtctcg tcagcgcgtg
      481 ctccgcgacg gaacagcaga gctcggccga tcagcagacc aacctggctt tcctcaatac
      541 gcaggtcggc cctatcgacg gccctaccaa tccgaagagt accctcaccg gtagcccgtt
      601 cggtgcgttt cggcccgtgc cttgctgcca accgtaatca cggctgacgc tcggcgctaa
      661 tcagcgcgaa acacctttgg ctgatcggcg tcgctcgccg gccgtcgcgt gcggggcatc
      721 ggcggcagtc gttcgcggcg gcggccctcg cgcgcgtgcc ggacggcgtt gcacaggcgc
      781 ggcggcggcg caacattgac ggaacagcgg cgtcgctcag atgttcagca gcttcaaccc
      841 cttctcgcgc gcgcaggcga tggcatcctc gtagcccgca tcggcgtgcc gcatgacgcc
      901 gctcgccggg tcgttccaca gcacgcgctc gatccgccgc gccgcctcgg gtgtgccgtc
      961 gcacacgatg accatgccgg catgctggga gaaccccatg ccgacgccgc cgccatggtg
     1021 cagcgagacc cacgtcgcgc cggacgcgca gttgagcagg ccgttgagca atggccagtc
     1081 cgagaccgca tcggagccgt cgcgcatggc ttcggtctcg cggttggggc tggccactga
     1141 gccggcgtcg agatggtcgc gcccgatcac gatcggcgcc ttgagctcgc ccgtcgccac
     1201 catgtcgttg aaggcaaggc caagccggtg gcggtcgccc aagcccaccc agcagatgcg
     1261 cgccggcagg ccctggaact tgatgcgctg gcgcgccatg tcgagccagg tgtggagatg
     1321 gcgattgtcc ggcatcagct ccttcacctt cgcgtcggtc ctgtaaatgt cctcgggatc
     1381 gcccgacagc gcgacccagc ggaacggccc gatgccgcgg cagaacagcg gccggatata
     1441 ggccggcacg aagccgggga agctgaaggc gtcggcgacg ccctcttcca gcgccatctg
     1501 gcggatgttg ttgccgtaat cgacggtcgg cacgccaagc ttgtggaact ccagcatggc
     1561 gcgcacatgg cccgccatcg attgcttggc ggccttggcg acggcgtcgg gcgcactggt
     1621 gcgcttggct tcccactcgg ccagcgtcca gccccggggc aggtagccgt tgatcggatc
     1681 gtgggcggag gtctggtcgg tgaggcaatc cggccgcacg ccgcggcgca gcagctcggg
     1741 cagcacgtcg gcggcattgc cgagcagcgc caccgacacc gccttcttct ccgccgaggc
     1801 cttggcgatg atcgacagcg cctcgtcgag atcgcgggcc tggcggtcga cgtagccggt
     1861 gcgcaggcgg aattcgatgc tgctcggccg gcattcgacg gcaaggcacg acgcgcccgc
     1921 catggtggcg gcaagcggtt gcgcgccgcc catgccgccc aagcccgcgg tcaggatcca
     1981 gcggccggcc aggctgccgc cgtagtgctg gcgggccatc tcgacgaagg tttcgtaagt
     2041 accctgcacg atgccctggc taccgatat
//
LOCUS       DASWGA010000517         4842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1202296, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000517 DASWGA010000000
VERSION     DASWGA010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4842
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1202296"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VF991_12270"
     CDS             <1..582
                     /locus_tag="VF991_12270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557266.1"
                     /translation="SSGAYGRLLSVATWRLGSYLHPGAPDHKPHYSDPSTELMTFDFD
                     FIRWVMGHPARLSASAARTDRHIPGEISALLAYEDGRHATVAASGLMPPGFPFTVGFR
                     ALFEKAAFHHHAVFGDGPPQSTFTIFEGEAEGKPVTTPPRNPYQAELQRFVNCIRGRA
                     DPELLDAERAIEALVLSIATQRALEEGQSIEVG"
     gene            complement(579..1622)
                     /gene="gtdA"
                     /locus_tag="VF991_12275"
     CDS             complement(579..1622)
                     /gene="gtdA"
                     /locus_tag="VF991_12275"
                     /EC_number="1.13.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047922 - gentisate 1,2-dioxygenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gentisate 1,2-dioxygenase"
                     /protein_id="HEX9557267.1"
                     /translation="MAQPATRNNARRDFYERIGGLSMAPLWESLHQLVPPQPAPKYQP
                     AHWDYDKVRPFLMESGSLITAKEAVRRVLILENPAMPGSSCITPTLYAGLQLILPGEV
                     APSHRHTQSALRFIVEGEGAYTAVDGERTLMREGDFVITPTWTWHDHGNESAKPMVWL
                     DGLDIPMVAMFNAGFAENGESDEQVVTAPAGTSDAKFASGLLPVDWKPERQTSPIFNY
                     PYARTREALAGLAKAGPPDPCHGYKLRYVNPASGGAPIPTMGTFMQLLPKGFATEPYR
                     STDGTVFSVVEGEGESRIGDKTFRWKKRDHFVVPSWATVVHKAKGEAVLFSFSDRPVQ
                     EKLDLWREDRGGR"
     gene            complement(1627..2556)
                     /locus_tag="VF991_12280"
     CDS             complement(1627..2556)
                     /locus_tag="VF991_12280"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX9557268.1"
                     /translation="MQGCTAQGAGRCRDRTIAKASPTDADNDNLIALSGEDMDRSSLR
                     PLVGISACLKQNGRGGWHHAVGERYVRAVVHAIGALPVLIPAIGPEFDEVPAMTASLD
                     RLVDSLDGVLLTGSPSNVEPHHYGGEESRPGTAHDPARDATTLPLIRHSIDRAVPLLA
                     ICRGLQEVNVALGGSLYQLVHEVDGRRDHRSPKSSDMDVNYAPAHDVDIVDGGMLHRL
                     LGERRLTVNSLHAQGVDRLAPRARLEAVADDGQVEAFSLPDAPAFALALQWHPEYKAL
                     DNPISMKLFEAFAAACRSRAASRLGAPLRAAAE"
     gene            2592..3107
                     /gene="secB"
                     /locus_tag="VF991_12285"
     CDS             2592..3107
                     /gene="secB"
                     /locus_tag="VF991_12285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051262 - protein tetramerization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEX9557269.1"
                     /translation="MTTTPPPSPPNPGPAQAPNAPLIMHGQYIKDLSFENPRAPQSLI
                     EQTQPQLTLNVQVTNRQFDAKTFEVALTIEASAKTPKDEPLFMLELVYAGTVTLGEVP
                     QDAFGPLLFIETPRLLFPFARAVVANATREAGFPPLNIAPVDFVALYRQQLDANGGKV
                     PGVAAGPVGHA"
     gene            complement(3104..3796)
                     /gene="dnaQ"
                     /locus_tag="VF991_12290"
     CDS             complement(3104..3796)
                     /gene="dnaQ"
                     /locus_tag="VF991_12290"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEX9557270.1"
                     /translation="MREIVLDTETTGLDPLAGHRVVEVGCIELVNTVATGKTFHAYFN
                     PEMIMPTGAQDVHGLTDEFLADKPLFAERIEEFLAFVADAQLVIHNAQFDIGFLNAEL
                     ERVGRPRLANAYVDTVSVARRKFPGQRASLDALCERFSIDNSVRTKHGALLDAELLAE
                     VYLELSGGRQRDLGLAPEIAGATVSGLLAAGNRPVRPPRPHLPSAAELAAHADFLKQI
                     TDPLWLKADALT"
     gene            complement(3811..4473)
                     /gene="coaE"
                     /locus_tag="VF991_12295"
     CDS             complement(3811..4473)
                     /gene="coaE"
                     /locus_tag="VF991_12295"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388504.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEX9557271.1"
                     /translation="MMIVGLTGSIGMGKSTAARMLRQMGVSVYDADAAVHAVQAPGGA
                     ALAPIEAAFPGVVKNGVLDRQALGARVFGNKQALRKLEAIVHPLVGQRQRAFLKRAAR
                     RGEKLVVLDIPLLFEGLGDRRVDATLVVSAPIFLQRHRVMARPGMTAERLNGILRQQV
                     PDVLKRRKADIVIPTGLGLAPTRAALAKAVATLKRRRGHFWPPNPWQEKHTARLAQAR
                     RK"
     gene            complement(4499..>4842)
                     /locus_tag="VF991_12300"
     CDS             complement(4499..>4842)
                     /locus_tag="VF991_12300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003533218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX9557272.1"
                     /translation="VFDGVGKDTWEASLDSLQPRGLLASFGNASGPVAPVPPGVLNTK
                     GSLYLTRPSLGAYTATRKDLEASAKSLFKMVKSGKVKIAIDQRYPLAEAGQAHIDLEG
                     RKTTGQTVIVP"
BASE COUNT          779 a         1651 c         1625 g          787 t
ORIGIN      
        1 tcgtcgggag cgtatggccg cctgctgagt gtcgccacct ggcgcctggg ctcctacctt
       61 catcccggcg cacccgatca caagccgcac tacagcgatc cgtcgaccga actgatgacc
      121 ttcgatttcg atttcatccg ctgggtgatg ggccatccgg cccgcctgtc ggccagcgcg
      181 gcgcgaaccg accgacatat ccctggcgag atctcggccc tcctggccta tgaggacggc
      241 cgtcacgcga ccgtcgccgc cagcggcctg atgccgcccg gatttccctt taccgtcggc
      301 tttcgagcgc tgttcgaaaa ggccgccttc caccatcacg ccgtctttgg cgacggcccg
      361 ccgcaaagca ccttcacgat ctttgagggc gaggccgaag gaaagcctgt gaccacgccg
      421 ccccgcaacc cgtatcaggc cgaattgcag cgcttcgtga attgcatccg cggccgggcc
      481 gatccggagc ttctcgacgc cgagcgcgcg atcgaggcgt tggtcctgtc aatcgccacg
      541 caacgcgccc tcgaggaagg ccaatcgatc gaggtcggct agcggccgcc gcgatcctcg
      601 cgccacaggt cgagcttctc ctgcaccggc cggtcggaga aggagaacag gacggcttcg
      661 cccttggcct tgtgcacgac ggtggcccag ctcggcacga cgaaatggtc gcgcttcttc
      721 cagcggaaag tcttgtcgcc gatcctgctt tcgccctcgc cctcgaccac cgagaacacc
      781 gtgccgtcgg tgctgcggta gggctcggtc gcaaagccct tgggcaggag ctgcatgaag
      841 gtgcccatgg tggggatcgg cgcgccgccg cttgccggat tgacatagcg cagcttgtag
      901 ccgtggcagg gatcgggcgg accggccttg gcgaggccgg ccaaggcctc gcgcgtgcgc
      961 gcgtagggat agttgaagat gggcgaggtc tgacgctcgg gcttccagtc gaccggcagc
     1021 aggccgctgg cgaatttcgc gtccgacgtg cctgcgggcg cggtgacgac ctgctcgtcg
     1081 ctctcgccgt tctcggcgaa acccgcgttg aacatcgcca ccatgggaat atcgaggccg
     1141 tccagccaca ccatgggctt ggccgactcg ttgccatggt catgccaggt ccaggtcggc
     1201 gtgatgacga aatcgccttc gcgcatgaga gtgcgctcgc cgtcgacggc ggtgtaggcg
     1261 ccctcgccct cgacgatgaa gcgcaacgcc gactgggtat ggcgatggct gggcgccacc
     1321 tcgcccggca ggatgagctg caggccggca tagagcgtcg gcgtgatgca ggagctgccc
     1381 ggcatcgccg gattctcgag gatcagcacc cgccgcaccg cctccttggc ggtgatcagc
     1441 gatcccgatt ccatcaggaa cggccgcacc ttatcgtagt cccaatgcgc cggctggtac
     1501 ttgggtgcgg gctgcggcgg caccagctgg tgcagcgact cccacagcgg cgccatcgag
     1561 aggccgccga tgcgctcgta gaaatcgcgg cgcgcgttgt tgcgggtggc gggctgggcc
     1621 atgtgattat tccgcggcgg cgcgcagcgg ggcgcccagc cgcgaggcgg cgcgcgagcg
     1681 gcaggcagcg gcgaaggctt cgaacaattt catcgagatc ggattgtcga gcgccttgta
     1741 ttcggggtgc cattgcaagg cgagcgcaaa ggccggcgca tcgggcaggc tgaacgcctc
     1801 gacctggccg tcgtcggcga ccgcctcgag cctggctcgc ggcgccaacc ggtcgacacc
     1861 ctgggcgtgc agcgagttca ccgtgaggcg gcgctcgccc aacaggcggt gcagcatgcc
     1921 gccgtcgacg atgtcgacgt cgtgcgccgg cgcatagttc acgtccatgt cggatgactt
     1981 gggcgaacga tggtcgcgcc gcccgtcgac ctcatgcacg agctggtaga gcgagccgcc
     2041 gagcgccacg ttgacctcct gcaggccacg gcagatcgcg agcagcggca cggcacgatc
     2101 gatcgaatgg cggatcagcg gcaaggtcgt ggcgtcgcgc gccggatcgt gtgccgtgcc
     2161 cggccggctt tcctcgccgc catagtggtg cggctcgaca ttggacgggc tgccggtcag
     2221 cagcacgccg tccagactat cgaccaggcg gtcgagggaa gcggtcatgg ccggcacctc
     2281 gtcgaactcg gggccgatgg cggggatcag caccggcagg gcgccgatgg cgtgaacgac
     2341 cgcccggacg tacctttcgc ccaccgcatg atgccatccg ccgcggccgt tttgcttgag
     2401 acaggccgaa atgcccacca aagggcgcag ggaagatcga tccatatcct cgccggacag
     2461 tgcaataaga ttgtcgttat cagcgtctgt gggcgatgcc ttggcaattg tccggtccct
     2521 gcacctgccc gcgccttgtg cagtgcagcc ttgcatggta ccgccgccgc cgaaacagcg
     2581 aaagacgagc catgacgacc acccctccgc cctcgccgcc gaatcccggt cccgcccagg
     2641 cgcccaacgc gccgctgatc atgcacggcc agtacatcaa ggacctgagc ttcgagaatc
     2701 cgcgcgcgcc gcaaagcctg atcgagcaga cccagccgca gctcacgctc aacgtgcagg
     2761 tcaccaaccg ccagttcgac gccaagacct tcgaggtggc gctcaccatc gaagccagcg
     2821 ccaagacgcc aaaggacgag ccgctattca tgctcgagct ggtctatgcc ggcacggtca
     2881 ccctgggcga ggtgccgcag gacgcgttcg gcccgctgct gttcatcgag acaccgcgcc
     2941 tgctgttccc gttcgcccgc gccgtcgtcg ccaacgccac gcgcgaggcg ggctttccgc
     3001 cgctcaacat cgcgccggtc gatttcgtgg cgctctatcg ccagcagctc gacgccaacg
     3061 gcggcaaggt gccgggcgtc gccgccgggc cggtcggaca cgcctaggtc agcgcgtctg
     3121 ccttcagcca cagcggatcg gtgatctgct tcaggaagtc ggcgtgggcg gcgagttcgg
     3181 cggcactcgg caggtgcggc cgcggcggac ggaccggtcg gttgccggcg gcgagcaatc
     3241 ccgagaccgt agcaccggca atctcgggcg cgaggcccag gtcgcgctgg cggccgccgc
     3301 tcagctcgag atagacctcg gccagcaatt cggcatcgag cagtgcgccg tgcttggtgc
     3361 gcacggaatt gtcgatgctg aagcgctcgc aaagcgcgtc gaggctggcg cgctggccgg
     3421 gaaacttgcg ccgcgccacc gacacggtgt cgacataggc gttggccagt ctcggccgtc
     3481 cgactcgttc cagctcggcg ttcaggaagc cgatgtcgaa ctgcgcattg tggatcacga
     3541 gctgggcatc ggcgacgaag gccaaaaact cctcgatgcg ctcggcgaac agcggcttgt
     3601 cggccaaaaa ctcgtcggtc aggccatgca cgtcctgcgc gccggtcggc atgatcattt
     3661 ccggattgaa ataggcgtgg aacgtcttgc cggtggcgac ggtgtttaca agctcgatgc
     3721 agcccacttc gaccacgcgg tggccagcga gcggatcgag gccggtggtc tcggtatcga
     3781 ggacgatttc gcgcatgaga ctcttctagc ctatttgcgg cgcgcctgcg ccagccgggc
     3841 tgtgtgtttc tcctgccatg gattgggcgg ccagaaatga ccgcgccggc gcttgagcgt
     3901 cgccacggcc ttggcgagcg ccgcgcgcgt cggcgccaag cccaacccgg tcgggatcac
     3961 gatatcggcc ttgcggcgct tcaggacgtc gggcacctgc tggcgcagga tgccgttcag
     4021 gcgctcggcc gtcatgccgg gtcgggccat gacccgatgg cgttgcagga agatcggtgc
     4081 gctcaccacc agggtggcgt cgacccgccg atcacccaag ccctcgaaca gcagcgggat
     4141 atcgagcacg accagcttct cgccgcgccg cgccgcgcgc ttgagaaagg cacgctggcg
     4201 ctggccgacc agcggatgga cgatggcttc gagcttgcgc agcgcttgct tgttgccgaa
     4261 cacccgcgcg cccagcgcct ggcgatcgag cacaccgttc ttcaccacgc ccgggaacgc
     4321 cgcctcgatg ggcgccagcg ccgccccgcc cggcgcctgc acggcatgga cggcggcgtc
     4381 ggcgtcgtac accgacaccc ccatctggcg cagcatcctg gccgcggtcg acttgcccat
     4441 gccgatggag ccggtcaggc cgacgatcat catcgaacgc tgaacgcctt cggcccagtc
     4501 aggggacgat gacggtctgc cctgtcgtct tgcgcccttc gagatcgata tgcgcctggc
     4561 ccgcttcggc cagcggatag cgctggtcga tggcgatctt caccttgccg ctcttgacca
     4621 tcttgaacag cgacttggcg ctggcttcga ggtccttgcg ggtggcggtg taggcgccga
     4681 ggctcggccg cgtgagatag agcgagccct tggtgttcag cacgccgggc ggcaccggcg
     4741 cgacggggcc ggacgcgttg ccgaacgagg ccagcaggcc gcgcggctgc aggctgtcga
     4801 gcgaggcctc ccaggtgtcc ttgccgacgc catcaaacac ca
//
LOCUS       DASWGA010000518         5174 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_185210, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000518 DASWGA010000000
VERSION     DASWGA010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5174
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185210"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..971
                     /locus_tag="VF991_12305"
     CDS             <1..971
                     /locus_tag="VF991_12305"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557273.1"
                     /translation="IGREFSTRHMAEVSRKYGVPVTWTALLSYLYGPGGHRKQLDLAA
                     EQRKSGALVIPQVSCRPLNFEFTFAEPFIFEVMKFMNELAVEDARMPGTRRRAYADPA
                     WRQKLKSELTPLFQHWWDRTVIAWAPSAKELEEQPLAEAAVKLGKDPVDLALDLALAN
                     DLQARFRMAVMNFDEKEVAELITDPHTIIALSDAGAHASQLCDACYSTYLLAHWVRER
                     KTFTIEQAVHNLTQRPAEMFGITDRGLLAAGRPADVVVFDPKTVGPGPLKRVYDLPAG
                     ADRLVSEASGIDAVIVNGKLIRRDGKDTVAANDTLPGRLLRHGRAA"
     gene            1077..1385
                     /locus_tag="VF991_12310"
     CDS             1077..1385
                     /locus_tag="VF991_12310"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004128342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HEX9557274.1"
                     /translation="MIHVLAIITTKPGMRDQILGHFRANVPAVKAEKGCIEYGAAVDA
                     DGMGSFQTKFGPDTFVVVEKWESTDALKAHSAAPHMAAYAAKTREHIASRVIHVLSPT
                     "
     gene            complement(1405..2061)
                     /locus_tag="VF991_12315"
     CDS             complement(1405..2061)
                     /locus_tag="VF991_12315"
                     /inference="COORDINATES: protein motif:HMM:NF024701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9557275.1"
                     /translation="MFSTAISSGRKRRGEGHTRREEILQAAKELFLEHGYDSTTIRRI
                     ADRVGISAPALYLYFKDKEALMLALCDQTFGHLLEAISEIERTVDDPLERIRRFGEAY
                     ARFGLSHPDEYRLVFLGANIPESMRKVGHRAATDDPTKPGVGGALVFGRLVAILAQVE
                     ASGVKLNYPPDTCAELCWMAMHGLVAAMIMKPEFPWSDRDLLISAMLDIHLKGMVRSA
                     "
     gene            2180..3322
                     /locus_tag="VF991_12320"
     CDS             2180..3322
                     /locus_tag="VF991_12320"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9557276.1"
                     /translation="MRVPFFQPPRKLPLRALAIVVGAGATAAAGFAAFSWTANASRVS
                     ASEPVVRPARVMEITYQQRSRSLVLAGTVVPRIESTLGFRVAGKITARTVDVGTIVKP
                     GDLIAQLDPADYRLAVDNARAALASADADYARAKADHERYLNLRGSAAFTPQTMEQRQ
                     SLAATALARVDQARSQLASAENNLAYTELRADSPGVVTLVQAEVGQVMAQGQGVVKVA
                     RTDELEILVGVPENRLKVVREASAASFELWSDPGRRHAARLRELSPSADPMTRTYPAR
                     FSVVEPPEFIGLGMTATLAFERPDGAPVAEVPLSAIFQRGTQPAVWVVDRQTGTVTLR
                     PVTIARWRDDSAAIASGVKDGEMIATAGVHKLEAGQKVKPVQQAAR"
     gene            3348..>5174
                     /locus_tag="VF991_12325"
     CDS             3348..>5174
                     /locus_tag="VF991_12325"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9557277.1"
                     /translation="MTTRTNLSALALKYSTLTVFFMIALVAAGTFAFFNLGRGEDPPF
                     TIKQMVVSAAWPGATSREVEQQVTEKIETKLQELPYFYNVTSYTKPGETVIYVSLRDD
                     IPPAKVADLWYQVRKKVGDIRGSLPQGVAGPFFNDEYGDTYSLIWGFEADGFSPAELK
                     DIVKAARQRLLRVPDVTKVDLIGLQDEKIYVEFSHARLAMLGVPVDQILEVVRRQNAI
                     VATGTVETKGERVTVRVDGAPLSAEELAALPFSANGRTLTLADVAEIKRGYQDPQQIA
                     MRFKGKPVLGLGVVMAPGGNVQTLGKALDQAMAEVEAGLPVGITVHRVANQPEVVDKS
                     FEEFISSLLEALAIVLVVSFISLGVRTGVIVAMSVPLVLAITFVGMMLLGIDFQRISL
                     GALIIALGLLVDDAIIAVEMMMVKLEQGASRLEAATYAYTSTAFPMLTGTLVTAIGFV
                     PVGFARSSAGEYTNSIFWVVGLSLIISWFVAVLFTPWMGYHLLPQPKVVHHDPYDGRL
                     YTTFRKLVVWCVSWRKTTIAITALAFVTSLGAFTLVQKQFFPTANRPELIVDLKLAQG
                     TSWAATDKEVRKLEKWLGKNPDVAFYTSYVGAGSPRFYLPTVP"
BASE COUNT          875 a         1770 c         1654 g          875 t
ORIGIN      
        1 ccatcggccg cgagttctcg accaggcaca tggccgaggt cagccgaaag tacggcgttc
       61 ccgtcacctg gacggccctg ctctcctatc tctacggccc gggcggacac cgcaagcaac
      121 tcgaccttgc cgccgagcag cgcaagtcgg gagcgctggt gatcccgcaa gtgagttgcc
      181 ggccgctcaa cttcgaattc accttcgccg agccgttcat ctttgaagtc atgaagttca
      241 tgaacgagct tgcggtcgag gatgcccgca tgccggggac ccgccgtcgc gcctatgccg
      301 atcccgcttg gcgccagaaa ttgaagtccg aactgacgcc gctctttcag cactggtggg
      361 accgcacggt catcgcctgg gcaccctcgg ccaaggagct cgaggagcag ccgctcgccg
      421 aggccgccgt taagttgggc aaggacccgg tcgatctcgc cctcgacctc gcactcgcca
      481 acgacctgca ggcgcgtttc cggatggccg tgatgaactt cgacgagaag gaggtggcgg
      541 aactgattac cgacccgcac accatcatcg ccctatcgga cgccggcgcc catgccagcc
      601 agctctgcga tgcctgctac tcgacctacc tgctggctca ctgggtgcgc gagcgcaaga
      661 ccttcaccat cgaacaggcc gtgcataacc tgacgcagcg gccggccgag atgttcggca
      721 tcaccgatcg tggcctgctg gccgcgggcc ggccggccga cgtcgtggtg ttcgatccca
      781 agacggtcgg gccgggcccg ctcaagcggg tctacgacct gccggcgggc gccgaccggc
      841 tggtctccga ggcgagcggc atcgacgccg tgatcgtcaa cggcaagctg atccgccgcg
      901 acggcaagga caccgtcgcc gccaacgaca cgctgcccgg ccgcctgctg cgccatggcc
      961 gcgcggccta gcgaagattg tcatcccgag cgaagcgagg gacctttgct ggtcactaaa
     1021 ggtccctcgg ccttcggcct cgggatgaca ccgtcacttt ccaagggagg aataaaatga
     1081 tccacgttct cgccatcatc acgaccaagc ccggcatgcg cgaccagatc ctgggccact
     1141 tccgcgccaa cgtgccggct gtgaaggcag agaagggctg catcgaatac ggcgccgccg
     1201 tcgatgccga cggcatgggc tcgttccaga ccaagttcgg ccccgacacg ttcgtcgtag
     1261 tcgagaaatg ggaaagcacg gacgcgctga aggcccactc ggccgcgccg cacatggccg
     1321 cctacgctgc caagacccgc gaacacatcg cgagccgcgt catccacgtc ctgtcgccga
     1381 cctgatccgg cggtcggcag gggctcaggc gctgcgcacc atgcccttga ggtggatgtc
     1441 cagcatcgcc gagatcagca ggtcgcggtc cgaccatggg aactcgggct tcatgatcat
     1501 cgcggccacg aggccgtgca tcgccatcca gcagagttcg gcgcaggtgt ccggcgggta
     1561 gttgagcttc acgcccgacg cctcgacctg cgccaggatc gcgaccagcc ggccgaacac
     1621 gagggcgccg ccgacgccgg gtttggtggg atcgtcggtc gccgcgcgat ggccgacctt
     1681 gcgcatcgat tcggggatgt tcgcgcccag gaacaccagc cggtactcgt cgggatggct
     1741 gagaccgaaa cgggcgtatg cctcgccgaa gcggcggatg cgctccagcg gatcatcgac
     1801 ggtcctctcg atctcgctga tcgcctcgag cagatgcccg aaggtctgat cgcaaagcgc
     1861 cagcatcagc gcttccttgt ccttgaaata gaggtagagc gcgggcgcgg aaatgccgac
     1921 ccggtcggcg attcggcgga tcgtggtcga gtcgtagccg tgctcgagaa acagctcctt
     1981 ggcggcctgc aggatttctt cgcggcgggt atggccctcg ccacgtcgct tgcggccgga
     2041 tgagatggct gtcgaaaaca cgctcaaaaa tttcctccgt ccccttgact cttaccttat
     2101 cgacggtaag ttatcaatgt tcagttaaca ttgttcatat gcattttgaa cattgtaaac
     2161 cttggaagga cggtttgcca tgcgtgttcc cttctttcag cccccacgca agctccctct
     2221 cagggccctg gctatcgtcg ttggcgccgg cgccacggcg gctgcgggct tcgcggcgtt
     2281 ctcgtggacg gccaatgcct cgcgggtctc ggccagcgag ccggtggtgc ggcccgcccg
     2341 ggttatggag atcacctacc agcagcgcag ccgctcgctg gtgctggccg ggaccgtggt
     2401 tccccgcatc gaaagcaccc taggattccg ggtcgctggc aagatcaccg cacgcaccgt
     2461 cgatgtcggc acgatcgtca agccgggcga cctgatcgcc cagctcgatc cggccgacta
     2521 ccggctcgcc gtcgacaacg cgcgcgctgc gctggcctcg gccgacgccg actatgcccg
     2581 cgccaaggct gaccacgagc gctacctcaa tctgcgcggc agtgccgcgt tcacgccgca
     2641 gacgatggaa caacgccagt cgctggcagc gaccgcgctc gcccgcgtcg accaggccag
     2701 gagccagctc gcctcggccg agaacaacct cgcctatacc gagctgcgcg ccgactcgcc
     2761 cggcgtcgtc acattggtgc aggccgaggt cggccaggtc atggcgcagg gccagggcgt
     2821 ggtcaaagtc gcccgcaccg acgaactcga aatcctggtc ggcgtgccgg agaatcggct
     2881 gaaggtggtg cgcgaggcca gtgccgcgag cttcgagctg tggtcggacc ctggccggcg
     2941 ccatgccgcg cggctgcgcg agctgtcgcc cagcgccgat ccgatgaccc gcacctatcc
     3001 ggcgcgcttc agcgtcgtcg agccgccgga gttcatcggg ctcggcatga ccgcgacgct
     3061 cgctttcgag cggcccgatg gggcgccggt ggccgaagtg ccgttgtcgg cgatctttca
     3121 acgcggcacc cagcccgccg tctgggtggt cgaccggcaa accggcaccg tcacgctgcg
     3181 gccggtcacg atcgcgcgct ggcgcgacga tagcgccgcc atcgcctcgg gcgttaagga
     3241 cggcgaaatg atcgccaccg cgggcgtcca caagctcgag gccggacaga aggtgaagcc
     3301 ggtgcagcag gcggcgcgct aacgctgctt cttcggggga gacagccatg accacgcgca
     3361 ccaatctctc ggcgctggcg ctgaaataca gcacgctcac cgtgttcttc atgatcgcgc
     3421 tggtcgcggc cggcaccttc gccttcttca atctcggccg cggcgaggat ccgcctttca
     3481 ccatcaagca gatggtggtg tcggcggcgt ggccgggtgc cacctcgcgc gaggtcgagc
     3541 agcaggtcac cgagaagatc gagaccaagc tgcaggagct gccctacttc tacaacgtca
     3601 ccagctacac caagcccggc gagacggtga tctacgtgtc gttgcgcgac gacatcccgc
     3661 ccgccaaggt ggccgacctg tggtaccagg tgcgcaagaa ggtcggcgat atcaggggct
     3721 cgctgccgca gggcgtcgcc ggtccgttct tcaacgacga gtacggcgac acctacagcc
     3781 tgatctgggg cttcgaggcg gacggcttct cgcccgccga gttgaaggac atcgtcaagg
     3841 ccgcccgcca gcgcctgctc agggtgcccg acgtcaccaa ggtcgacctg atcggtctgc
     3901 aagacgagaa gatctacgtc gagttcagcc atgcccggct ggccatgctg ggcgtgccgg
     3961 tcgaccagat cctcgaggtg gtgcggcggc agaatgccat cgtcgccacc ggcacggtcg
     4021 agaccaaggg cgagcgcgtc accgttcggg tcgacggcgc gccattgtcg gccgaggaac
     4081 ttgccgccct ccccttcagc gccaatggcc gcacgctcac cctggccgac gtcgccgaga
     4141 tcaagcgcgg ctaccaggac ccgcaacaga tcgccatgcg cttcaagggc aaaccggtgc
     4201 tcggcctggg cgtcgtcatg gcgccgggcg gcaacgtgca gaccttgggc aaggcgctcg
     4261 accaggcgat ggccgaggtc gaggccggcc tgccagtcgg catcaccgtg catcgcgtcg
     4321 ccaaccagcc cgaggtggtc gacaagtcgt tcgaggagtt catctcctcg ctcttggaag
     4381 cgctcgccat cgtgctggtc gtgtcgttca tcagcctggg cgtgcgcacc ggcgtcatcg
     4441 tggcgatgtc ggtgccgctg gtgctggcca tcaccttcgt cggcatgatg ctgctcggta
     4501 tcgacttcca gcggatctcg ctcggcgcgc tgatcatcgc gttgggcctg ctggtcgacg
     4561 acgccatcat cgccgtcgag atgatgatgg tgaagctgga gcaaggcgcg agccgcctcg
     4621 aggccgccac ctacgcctac acctcgaccg cctttccgat gctgacgggc accttagtga
     4681 ccgcgatcgg cttcgtgccg gtgggtttcg cgaggtcgag cgccggcgaa tacaccaact
     4741 cgatcttctg ggtggtcggg ctgtcgctca tcatttcgtg gttcgtagcc gtgctgttca
     4801 cgccgtggat gggctaccat ctgctgccgc agcccaaggt cgtccaccac gatccctatg
     4861 acggccggct gtacacgacc tttcgcaagc tggtcgtgtg gtgcgtgagc tggcgcaaga
     4921 ccaccatcgc catcacggcg ctggccttcg tcacgtcgct gggcgccttc actctggtgc
     4981 agaagcagtt cttccccaca gccaaccgtc ccgagctgat cgtcgacctg aagctggcgc
     5041 agggcacctc gtgggcagcc accgacaagg aagtccgcaa gctcgaaaag tggctgggca
     5101 agaaccccga cgtcgccttc tatacctcct atgtcggcgc cggcagcccg cgcttctacc
     5161 tgccgaccgt gccc
//
LOCUS       DASWGA010000519         2528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1202393, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000519 DASWGA010000000
VERSION     DASWGA010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1202393"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            334..1128
                     /gene="rpsB"
                     /locus_tag="VF991_12330"
     CDS             334..1128
                     /gene="rpsB"
                     /locus_tag="VF991_12330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019995182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEX9557278.1"
                     /translation="MAMPTFTMRQLLEAGVHFGHHTRRWNPKMKPYLFGVRNGVHIID
                     LTKTVPLLEQALQQVRQVVSNGGRVLFVGTKAAAAERIADAAKRCGQYYVNHRWLGGM
                     ITNWQTISASIKRLRELDERLKGDVIGLTKKEQLDLTRERDKLERSLGGIKEMGGTPD
                     MLFIIDTNKEAIAVQEARKRGIPIVAVLDSNSDPDGIDFPIPGNDDAIRAVSLYCDLM
                     SGAVLDGIRAEIAASGGDVGELTEPPAEEVPAAEADGAGAEASPAG"
     gene            1216..2142
                     /gene="tsf"
                     /locus_tag="VF991_12335"
     CDS             1216..2142
                     /gene="tsf"
                     /locus_tag="VF991_12335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006934690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEX9557279.1"
                     /translation="MAEITASLVKELREKTGAGMMDCKRALSEVQGDLEKAVDWLRTK
                     GLSAAAKKAGRVAAEGLIGVAASGNRGAVVEVNSETDFVGRNETFQKFVATAARIALD
                     NGGDMTKIAAAPFPGSGRDVQGELTNLIATIGENMSLRRAAALAVSDGVVAAYTHNAV
                     APDLGKIGVLVALESTGDKAKLAALAKQLAMHVAAANPLSLTVADLNQAAIERERAVL
                     AEKAGQSGKAADIIAKMVEGGLRKFHQEVVLLEQVFVIDGKSRVSKVVDEAAKQVGAP
                     VRLAGFLRFALGEGIERKSEDFAAEVAAQLKK"
     gene            2266..>2528
                     /gene="pyrH"
                     /locus_tag="VF991_12340"
     CDS             2266..>2528
                     /gene="pyrH"
                     /locus_tag="VF991_12340"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112126.1"
                     /note="Catalyzes the phosphorylation of UMP to UDP;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEX9557280.1"
                     /translation="MGTREYGLDPTMVSMVAQEVKAVHDMGVQVCLVIGGGNIFRGVS
                     AAASGMDRASGDYMGMLATVINSLAMQSALERQGLQTRVQSAIP"
BASE COUNT          464 a          819 c          852 g          393 t
ORIGIN      
        1 aggacagcga aacccgccgc atcctcgccc gcatggctgc cgacgccttc aagagcgggc
       61 ggaaggtctg gatcaccgcc aacaacaagg ccgagggcag cgcccccctg tcgctcctca
      121 aactggccga ggaaatcgcc aaactactgc cctaaaccat tgattttatt ggcccttgca
      181 atctcggggc gaagccttta gaaccacgcc cacttcgcac gcgggtttgc ggtcgacggg
      241 gagacatccc gtccgctcgc tccggtgttc cgctggcctt ccaagccaga gggacgacgc
      301 ccgcggaggc ccaaccggaa aaggagatac ggcatggcta tgccgacatt cacgatgcgt
      361 cagttgctgg aagcgggtgt ccatttcggc caccacaccc ggcgttggaa tcccaagatg
      421 aagccgtacc tgttcggggt gcgcaacggg gtccatatca tcgatctcac caagaccgtg
      481 ccgttgctcg agcaggcgct gcagcaggtc cgccaggtcg tgtccaacgg cggccgcgtg
      541 ctgttcgtcg gcaccaaggc ggccgccgcc gagcgcatcg ccgatgccgc caagcgctgc
      601 ggccagtatt acgtcaatca tcgctggctc ggtggcatga tcaccaactg gcagaccatc
      661 tcggcctcga tcaagcgcct gcgcgagctc gacgagcggc tgaagggcga tgtcatcggc
      721 ctcaccaaga aggagcagct cgacctgacg cgcgagcgcg ataagctcga gcgctcgctg
      781 ggcggcatca aggaaatggg cggcacgccc gatatgctgt tcatcatcga caccaacaag
      841 gaggcgatcg cggttcagga ggcgcgcaag cgcggcatcc cgatcgtggc ggtgctcgac
      901 agcaactccg atcccgacgg catcgacttt ccgatcccgg gcaatgacga tgccatccgc
      961 gcggtgtcgc tctattgcga tttgatgtcg ggcgcggtgc tcgacggcat ccgcgccgag
     1021 atcgcggcct cgggcggcga tgtcggcgag ctcaccgagc cgccggccga ggaggtcccc
     1081 gcggcggaag ccgacggcgc gggcgccgag gcatcgccgg ccggatagcc ggtcccttgg
     1141 cagatgaata agcggggccg gtcgcaagac cggccccatt tgcacccgat tgggttgcac
     1201 gagacggagt gtcaaatggc tgagatcacc gcttccctgg tcaaggaact gcgcgagaag
     1261 accggcgcgg gcatgatgga ttgcaagcgg gcgctgagcg aagttcaggg cgaccttgag
     1321 aaggcggtcg actggctgcg taccaagggc ctgtcggctg ccgccaagaa ggccggtcgc
     1381 gtcgcggccg aaggtctgat cggcgtggcc gccagcggca atcgcggcgc cgtggtcgag
     1441 gtcaattccg agaccgattt cgtcggccgc aacgagacct tccagaagtt cgtggccacg
     1501 gccgcgcgca tcgcgctcga caacggcggc gacatgacca agatcgccgc cgcgccgttc
     1561 cccggcagcg gccgcgacgt gcagggcgag ctcaccaacc taatcgccac catcggcgaa
     1621 aacatgtcgc tgcgccgcgc cgctgcgctc gcggtatccg acggcgtcgt cgccgcctat
     1681 acgcacaacg cggtggcgcc cgacctcggc aagatcggcg tgttggtggc gctcgaatcg
     1741 acgggcgaca aggccaagct cgccgccctc gccaagcagc tcgccatgca cgtggcggcc
     1801 gccaacccgc tgtcgctcac cgtggccgac ctcaatcagg cggcgatcga gcgcgagcgc
     1861 gcggtactgg ccgagaaggc gggccaaagc ggcaaggccg ccgacatcat cgccaagatg
     1921 gtcgagggcg gcctgcgcaa gttccaccag gaggttgtgc tgctcgagca ggtcttcgtc
     1981 atcgacggca agagccgggt ctccaaggtg gtcgacgagg cggccaagca ggttggcgcc
     2041 ccggttcgac tggcgggctt cctgcgcttt gccttgggcg aaggcatcga gaggaagtcc
     2101 gaggactttg cggccgaggt ggccgctcag ctcaagaagt agtatgaaaa cgcaccggcg
     2161 cgcgggttgt aggccgtcgc ccaagaaaac cgtgttcaga ggcatgtgat gccgtcggct
     2221 ccccgttatc gccgcgtcct gttgaagctc tcgggcgagg gactaatggg gactcgcgaa
     2281 tatgggctcg atccgaccat ggtctccatg gtggctcagg aggtgaaggc cgtgcacgac
     2341 atgggggtgc aggtttgcct ggtgatcggc ggcggcaaca tattccgcgg cgtctcggcc
     2401 gccgcctcgg gtatggaccg ggcgagcggc gactacatgg gcatgctggc cacggtcatc
     2461 aattcactgg cgatgcaaag cgccctcgag cgccagggcc tgcagacccg cgttcagtcg
     2521 gcgatccc
//
LOCUS       DASWGA010000520         3492 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1825491, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000520 DASWGA010000000
VERSION     DASWGA010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825491"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(250..702)
                     /locus_tag="VF991_12345"
     CDS             complement(250..702)
                     /locus_tag="VF991_12345"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009759880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEX9557281.1"
                     /translation="MATEVNFYHLTRSSLEDALPRLLAKTLQAGERAVVMVGSPERVD
                     ALNTHLWSHDPNGFLPHGAARDGDADRQPIWLTHLDENPNGAAFLFVADRARSERMAD
                     YKRCFELFDGRDETAVAETRERWKAYKAAGHTVVYWQQTPNGGWEKKS"
     gene            complement(710..2203)
                     /locus_tag="VF991_12350"
     CDS             complement(710..2203)
                     /locus_tag="VF991_12350"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEX9557282.1"
                     /translation="MKVEFSAFPKAFSGNVAVFIAADKQLLASAQAIDKDISGTIVRA
                     IDASRFTGAKGQSLTLLGQAGNIARLTLLGVGKPRELDARSAEALGGLVAAEANAAGQ
                     KAVTVVVDPVKGTRLTPGQIAARIALGAELRNYRFDKYKTKDKPEQKRSLELLTLVVA
                     APAEARRVHERLAPTVDAVFFTRDLVSEPANVLFPAEFARRARELTKLGVKVEILGEA
                     EMKKLGMNVLLAVGQGSERESQLLVMRWMNGPKSQKPVALIGKGVCFDTGGISLKPAG
                     GMEDMKWDMGGAGAVTGAMRLLAARKARANVVGVCALVENMPDGNAQRPGDVVKSMSG
                     QTVEVINTDAEGRLILCDAMWYAQEKFKPQAMVELSTLTGAIIVALGHERAGLFSNNN
                     ALSNKLRAAGSAIGEKLWRMPLGPKYDKLIDSDIADMRNVTNSRDASSITAAQFLQRF
                     VQEGVAWAHLDIAGMAWSNKDGSTTPKGATAYGVRLLDAWIAENYER"
     gene            2359..>3492
                     /locus_tag="VF991_12355"
     CDS             2359..>3492
                     /locus_tag="VF991_12355"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEX9557283.1"
                     /translation="MTSALLPRVSVIGLGKLGAPLAAVLASRGFDVIGLDVSKTLVDA
                     LNAGKMPIVEPQLNELIAANKRRLSATMDVGEAVQKSDASFVIVPTPSDSTGFFSNRF
                     VLQAMQSIGKALRRKNGYHMVVITSTVMPGTTGGEIKTALETASGRKVGPDLGLCYNP
                     EFIALGSVVRDMLYPDSILIGESDAKAGDMLQTIYLQMCEKKPPVQRMNFVNAELTKI
                     SVNTYVTTKISYANMLADICDRLPGADVDAVTKALGADTRIGPKYLKAAMGYGGPCFP
                     RDNVAFAALARKIGARADVAEATDRINNYQIDRLTGLVAKFAKAGTRIAILGLSYKPQ
                     TPVVEESHSVKLAAKLADAGYIVAIHDPLAQDAALAMLGDKVVG"
BASE COUNT          593 a         1179 c         1101 g          619 t
ORIGIN      
        1 gaagaaccgt cgtcgtcccc tccgctatcg cgactacatg gcgaccttcg aggccgattc
       61 gccggcattc tatcgaccgg agggtccggt gccgatgatg gagcgaatca agtcggcgtg
      121 gcgcggctat tggcacccgc gcgagaaacg gcattaggct ctttatgacg acaaatcagg
      181 gagcgcactg aagtcgttac gccactactg acactggttt tttatcagct gtccgtacga
      241 cggtagacct caacttttct tctcccaccc gccattcggc gtctgctgcc aatagactac
      301 cgtgtggccg gccgccttgt aggccttcca gcgctcgcgc gtttcggcga cggctgtctc
      361 gtcgcgacca tcgaatagct cgaagcagcg cttgtagtcg gccatgcgtt cggaccgagc
      421 gcggtcggcg acgaacagga aggcagcacc gttggggttc tcgtcgaggt gcgtgagcca
      481 gatcggctgg cggtcggcgt cgccgtcccg ggcggcgcca tgtggcagga agccgttggg
      541 atcatggctc cacagatgcg tgttcaacgc atcgacccgc tcgggcgagc ccaccatgac
      601 caccgcccgc tcgcctgcct gcagcgtctt ggccagcagg cggggcagcg catcctcgag
      661 cgacgatcga gtcaggtgat agaagttgac ctcggtcgcc atcgggccgt cagcgctcgt
      721 agttctcggc aatccacgca tcgagcaggc gcacgccgta ggccgtggcg cccttcggcg
      781 tcgtgctgcc gtccttgttc gaccaagcca tgccggcgat gtcgagatgg gcccaggcga
      841 cgccctcctg gacgaaacgc tgcaggaact gcgccgcggt gatcgaactg gcatcgcggc
      901 tgttggtgac gttcctcata tcggcgatgt cggaatcgat cagcttgtcg tatttcgggc
      961 cgagcggcat gcgccacagc ttctcgccga tcgccgatcc cgcggcgcgc agcttgttgg
     1021 atagagcgtt gttgttgctg aacagcccgg cgcgctcatg acccagtgcc acgatgatgg
     1081 cgcccgtcag ggtcgaaagc tcgaccatcg cctgcggctt gaacttctcc tgcgcatacc
     1141 acatggcatc gcacaggatc agccggccct cggcgtcggt gttgatgacc tcgacggtct
     1201 ggcccgacat gctcttgacc acgtcacccg gccgctgggc gttgccgtcc ggcatgttct
     1261 cgaccagcgc acaaacgccc accacgttgg ccctggcctt gcgggcggcc agcaggcgca
     1321 tcgctccggt gacggcgccg gcgccgccca tgtcccactt catgtcttcc atcccgccgg
     1381 cgggcttcag cgagatgccg ccggtgtcga agcacacgcc cttgccgatc agcgcgaccg
     1441 gcttctgcga cttcgggccg ttcatccagc gcatgaccag gagctgcgat tcgcgttcgc
     1501 tgccctggcc cacggccaac agaacgttca tgccgagctt cttcatctcg gcctcgccca
     1561 ggatctcgac cttgacgccg agcttggtga gctcgcgggc gcgccgcgcg aactcggccg
     1621 gaaagagcac gttggcgggc tcgctcacca ggtcgcgggt gaagaacacc gcatcgacgg
     1681 tgggcgcgag ccgctcatgg acacgccggg cctcggccgg cgccgccacc accagcgtga
     1741 gcagctcgag cgagcgcttt tgctcgggct tgtccttggt cttgtatttg tcgaagcggt
     1801 agttgcgcag ctcagcgccg agcgcaatgc gggccgcgat ctggccaggc gtcaggcgag
     1861 ttcccttcac gggatcgacg acaaccgtca ccgccttctg gccggcggca ttggcttcgg
     1921 ccgcaaccag gccacccagg gcctcggcgc tgcgggcatc aagttcccgc ggcttgccga
     1981 cgcccagcag agtaaggcga gcgatgttgc cggcctggcc caacagtgtc agcgactggc
     2041 ccttggcccc ggtgaagcgg ctggcgtcga tcgcccgcac aatcgttccg ctgatgtcct
     2101 tgtcgatggc ttgcgcgctg gccaggagtt gcttgtcggc ggcaatgaag accgccacgt
     2161 tgcctgagaa ggccttagga aaggccgaaa actccacttt cattcgattc ccccgctcct
     2221 ggcgcgcatt gaatggtgat ttttcgcgcc tgcgacggga cggcgcaagc agcgaattgc
     2281 cgccgaaccg ctgcaaattc gggtggcgtc cgacggccgc cgacagtatc agtaccggcc
     2341 ctcaagacgg acatggaaat gacttcagcc cttctgcctc gcgtctcggt gatcggtctc
     2401 ggcaagctcg gcgctccgct cgccgcggtg ctcgccagcc gcggttttga cgtgatcggc
     2461 ctcgacgtga gcaagaccct tgtcgacgca ctgaatgccg gcaagatgcc gatcgtcgag
     2521 ccgcagctca acgagctgat cgccgccaac aagcggcgcc tgtcggccac gatggacgtc
     2581 ggcgaggccg tccagaagag cgacgccagc ttcgtgatcg tgccgacgcc gtcggacagc
     2641 accggcttct tctccaatcg cttcgtgctg caggccatgc agtcgatcgg caaggcgctg
     2701 cgccgcaaga acggctacca catggtggtc atcaccagca cggtgatgcc cggcaccacc
     2761 ggcggcgaga tcaagaccgc cctcgagacg gcgtcgggcc gcaaggtcgg gcccgatctc
     2821 ggcttgtgct acaatccgga gttcatcgcg ctgggcagcg tcgtacgcga catgctctat
     2881 cccgattcga tcctgatcgg cgagagcgac gccaaggccg gcgacatgct gcagaccatt
     2941 tatctgcaga tgtgcgagaa gaagccgccg gtgcagcgca tgaacttcgt gaatgccgag
     3001 ctgaccaaga tctcggtgaa cacctacgtc acgaccaaga tctcctatgc caacatgctg
     3061 gccgatatct gcgatcgcct gccgggcgcc gacgtcgacg ccgtcaccaa ggcgctgggc
     3121 gccgacacgc gcatcggtcc gaagtatctg aaggccgcga tgggctatgg cggaccctgc
     3181 ttcccgcgcg acaacgtcgc cttcgccgcc ctcgcccgca agatcggcgc gcgcgccgac
     3241 gtcgccgagg cgaccgatcg catcaacaac taccagatcg accgcctgac cggcctggtg
     3301 gccaagttcg ccaaggccgg cacgcgcatt gccatcctgg gactgtccta caagccgcag
     3361 actccggtgg tcgaggaaag ccacagcgtg aagctcgcgg ccaagctcgc ggacgcgggc
     3421 tatatcgtcg ccatccacga tcccctggca caggacgcgg ccctcgcaat gctgggcgac
     3481 aaggtggtgg gc
//
LOCUS       DASWGA010000521         2293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_308610, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000521 DASWGA010000000
VERSION     DASWGA010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308610"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..915
                     /locus_tag="VF991_12360"
     CDS             <1..915
                     /locus_tag="VF991_12360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEX9557284.1"
                     /translation="SYVLENREVMMRLAPELFSAMRVLPVADYSEELLATLRSVSFSD
                     DAEPNVVLLTPGHFNSAYFEHAFLADEMGIELVEGSDLFVDEGRVYMRTPRGPQRVDV
                     IYRRVDDGFLDPLAMRPDSWLGVAGLLGALRAGRVNIVNALGNGVADDKSTYTYVPEM
                     IRFYLGEEPVLANVPTWRCDRADDFKYVLERLGELVVKEVHGSGGKGMLVGPTASKAE
                     IEEFTKLVKARPDNYIAQPTLALSTCPTFVGQGVAPRHVDLRPFVLSGRKITIIPGGL
                     TRVALKEGSLVVNSSQGGGTKDTWVLAP"
     gene            983..1918
                     /locus_tag="VF991_12365"
     CDS             983..1918
                     /locus_tag="VF991_12365"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HEX9557285.1"
                     /translation="MLSSTAKNLYWMGRYLQRAKSTARLIEATQRMALQSRGEEAAGV
                     AVIFGMEDEFRQTQQQSRGRLASLIDFLVLDENNPSSIVSSIGAARRNAREERNNITV
                     DVWESLNGLWLELNGRLRGNRALLDRGALIESVKKQAVMIFGAAQVTLLRDEAYNFLQ
                     LGAFLERADNTARILDVKFHILRPDGDPNADGLDYFAWSEVLACIGAVRTYRRIYRSA
                     LDPMKVAELMMLRRDVPRSVHHCLWMVDLSMGELADAYGTRGEADRVAGELHARLRYA
                     RIDQVFEMGLNKFLGGVRTDIATLSDEIGRQFLLD"
     gene            1925..>2293
                     /locus_tag="VF991_12370"
     CDS             1925..>2293
                     /locus_tag="VF991_12370"
                     /inference="COORDINATES: protein motif:HMM:NF019977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase N-terminal domain-containing
                     protein"
                     /protein_id="HEX9557286.1"
                     /translation="MRLSVHHVTRFTFDQPSGHSIHDVRLTPKPAAAQRIVSWRIDGP
                     GKRSDWLDGHGNQVTTFSVAQQHDHVEIVVHGIYEYSGADQWLRYAETPTLPAPFWLR
                     NTGLARHDAGFDPLIEGLAER"
BASE COUNT          375 a          789 c          757 g          372 t
ORIGIN      
        1 tcctacgtgc tggagaaccg cgaggtcatg atgcggctgg cgcccgagct gttctcggcc
       61 atgcgcgtgc tgccggtcgc cgactactcc gaagagcttt tggcgaccct gcgctcggtg
      121 tcgttcagcg acgacgccga gcccaacgtc gtgctgttga cgccgggcca tttcaacagc
      181 gcctatttcg agcacgcctt cctggccgac gagatgggca tcgagctggt cgagggctcg
      241 gacctgttcg tcgacgaggg ccgcgtctac atgcgcacgc cgcgcgggcc gcagcgggtc
      301 gacgtgatct accgccgggt cgacgacggc ttcctcgatc cgctggcgat gcgtccggat
      361 tcctggcttg gcgtcgcggg actcttgggc gcgctgcgcg ccggccgcgt gaacatcgtc
      421 aatgcgttgg gcaacggcgt ggccgacgac aagtcgacct acacctacgt gccggagatg
      481 atccgcttct atctcggcga ggagccggtg ctggccaacg tgccgacctg gcgctgcgat
      541 cgcgccgacg acttcaagta cgtgctcgag cggctgggcg agctggtcgt caaggaagtg
      601 cacggctcgg gcggcaaggg catgctggtc gggccgaccg cgagcaaggc cgagatcgag
      661 gaattcacca aactcgtgaa ggcgcggccg gacaattaca tcgcccagcc gaccctggcg
      721 ctgtcgacct gcccgacctt cgtcggtcag ggcgtggcgc cgcgccatgt cgacctcagg
      781 ccgttcgtgc tgtcgggccg caagatcacc atcattcccg gcggcctcac gcgcgtggcg
      841 ctgaaggagg gctcgctggt ggtcaattcg agccagggcg gcggcaccaa ggacacctgg
      901 gtgctggcgc catgacctca agcggagcgc ggacctccgg tccgctcatg aagcatgatg
      961 cggacctgga ggtccgcgct ccatgctgag cagtaccgcc aagaacctct actggatggg
     1021 ccgctacctg cagcgcgcca aatcgacggc gcggctgatc gaagccacgc aacgcatggc
     1081 actgcagtcg cgcggcgagg aagcggccgg cgtggcggtg atcttcggca tggaggacga
     1141 gttccgccag acccagcagc agtcgcgcgg acggctggcc agcctgatcg acttcctggt
     1201 gctcgatgag aacaacccct cctcgatcgt gagctcgatc ggcgccgccc ggcgcaacgc
     1261 ccgcgaggag cgcaacaaca tcaccgtcga tgtctgggaa agcctgaacg ggctgtggct
     1321 cgaactgaac ggccgcctgc gcggcaatcg cgccctttta gaccgcggcg cgctgatcga
     1381 atcggtgaag aagcaggcgg tgatgatctt cggcgccgcg caagtcacct tgctgcgcga
     1441 cgaggcctac aatttcctgc agctcggcgc cttcctcgag cgcgccgaca acaccgcccg
     1501 catcctcgac gtcaaattcc atatcctgcg tcccgacggc gaccccaacg ccgacgggct
     1561 cgattacttc gcctggtcgg aggtgctggc ctgcatcggc gcggtgcgca cctaccggcg
     1621 catctaccgc agcgcgctcg atcccatgaa ggtcgccgag ctgatgatgc tgcgccgcga
     1681 cgtgccgcgc tcggtgcatc attgcctgtg gatggtcgac ctcagcatgg gcgagctggc
     1741 cgacgcctac ggcacgcgcg gcgaggccga tcgcgttgcc ggcgaactgc acgcccggct
     1801 gcgctacgcg cgcatcgacc aggtgttcga gatggggctg aacaagtttc taggcggggt
     1861 gcgcaccgac atcgccacgc tgtccgacga aatcggccgc cagttcctgc tcgattgagc
     1921 caccatgcgc ctgtccgtcc accacgtcac gcgcttcacc ttcgaccagc cgtccggcca
     1981 ttcgatccac gacgtgcggc tcacgcccaa gccggcggcc gcccagcgca tcgtctcctg
     2041 gcgcatcgac gggccgggca agcgctccga ctggcttgac ggccacggca accaggtcac
     2101 gaccttctcg gtggcccagc agcacgacca tgtcgagatc gtggtgcacg gcatctatga
     2161 gtacagcggc gccgaccagt ggctgcgcta cgccgagacg ccgacgcttc ccgcgccgtt
     2221 ctggctgcgc aacaccggcc ttgcccgcca cgatgcgggc ttcgacccgc tgatcgaggg
     2281 cctggccgaa agg
//
LOCUS       DASWGA010000522         4493 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_821776, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000522 DASWGA010000000
VERSION     DASWGA010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4493
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_821776"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1087
                     /locus_tag="VF991_12375"
     CDS             <1..1087
                     /locus_tag="VF991_12375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9557287.1"
                     /translation="YNRDDHMAWQQALGRQGWLAYTWPKKYGGPGWDVTQRFLFENVL
                     AEEGAPRIIPFGPKMVGPVIYTFGSDEQKERFLPGIRQSTVSWCQGYSEPGAGSDLAN
                     LRTRAVREGDHYIVNGQKTWTSFAHWGDWIFCLVRTNPDAKPQEGISFLLIDMKTPGI
                     TVKPIIMADGGHEVNEVFFDNVKVPVENLIGKEGEGWTYAKFLLANERLGIAAVPQSK
                     RGVEALKDIARAELLDGKPLIKNQTFAEKIADLEIQVTALEYTELRVLSSMAHGGQPG
                     PEVSGLKIRGSEIQQRIAELAMEAVGEYAAPYLPGLLWQGSNEEPVGPPHAHIAAPRY
                     FNTRKTTIYGGSNEIQKGIISKMVLGL"
     gene            1255..2451
                     /locus_tag="VF991_12380"
     CDS             1255..2451
                     /locus_tag="VF991_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9557288.1"
                     /translation="MDLALKPEHKTFADEIRAFVRKELSPATRAKTFSGKHYNRDDHM
                     AWQQALGRQGWLAYTWPKKYGGPGWDVTQRFLFENVLAEEGAPRIIPFGVKMVGPVIY
                     TFGSNEQKERFLPGIRSSEVSWCQGYSEPGAGSDLANLRTRAVRDGDHYIVNGQKTWT
                     SFAHWADWIFCLVRSDPDAKPQEGISFLLIDMKTPGVTVRPIIMLDGAHHVNDVFLDN
                     VKVPIANRIGKEGEGWTCAKFLLANERLGIAEVPASKRGVRSLRDIARAEPMGGATLA
                     DDPAFTNRIADLDLQVQALEMSELRALSTMALGGAPGPEVSTLKIRGSEIQQRIAELT
                     MEAVGEYAAPYQPGMLFHDTNETPVGPDHAPPAAPRYFNMRKTSIYGGSNEIQKNIVS
                     KMVLGL"
     gene            2508..3650
                     /locus_tag="VF991_12385"
     CDS             2508..3650
                     /locus_tag="VF991_12385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9557289.1"
                     /translation="MDLSLSDEQKQLQDGAERFIRDKYTFENRRKIAATERGWLTENW
                     AQFAELGWLGMAFSEEDGGYGGGPIETMIVMEQFGKGLVLEPFLPTVVLGGGMIAAAG
                     SKAQREALLPPMIEGKKQFAFAWLERQSRYNLADISLKATKEGNGWSLSGHKGVVYNA
                     LSADTIIVLARTAGAAREDKGLTLFLVDAKAKGITRRDYPTQDALRASELTFDKVSVG
                     ADSVLGKIDGAFPVVEDAVDRAIVALCAEATGCMDAINAATLEYIKTRKQFGVPIGKF
                     QVLQHRMVDCFTNAQEARSMTLMASLKIDDKDRVVRAKAASGAKVQIGKSGKFCGQSA
                     VQMHGGMGVTDELSVSHYFKRLTMIDLMFGNQQHHLTRYSNLAMAA"
     gene            complement(3663..4166)
                     /locus_tag="VF991_12390"
     CDS             complement(3663..4166)
                     /locus_tag="VF991_12390"
                     /inference="COORDINATES: protein motif:HMM:NF017950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF992 domain-containing protein"
                     /protein_id="HEX9557290.1"
                     /translation="MNKCLSAAVAATLALATGACQQPTAQQINQQNTGSRIYIGALTC
                     NVSGSTGYVLGSTKKLDCVFLNRNGTTALYDGEIRKVGIDIGYTRAVHSIWRVYSLGS
                     DKGADALGGNYIGEQSTVAMSSQAGGNWLYGGRDREIGMIASGVVKDAGYNFATGVAE
                     MSLTLKP"
     gene            complement(4243..>4493)
                     /locus_tag="VF991_12395"
     CDS             complement(4243..>4493)
                     /locus_tag="VF991_12395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HEX9557291.1"
                     /translation="EEPRPHVTELAAAYAFALCKGHVFHDGNKRTSHAVAATFLELNG
                     WTHEASEPDVVRTMIGVADGSIKEVALAAWFRKTSRKA"
BASE COUNT          849 a         1454 c         1447 g          743 t
ORIGIN      
        1 ttacaatcgc gacgaccata tggcctggca gcaggcgctg ggtcgccagg gctggctcgc
       61 ctacacctgg cccaagaaat acggcggtcc gggctgggac gtcacgcagc gcttcctgtt
      121 cgagaacgtg ctggccgagg agggcgcacc gcgcatcatc ccgttcggcc ccaaaatggt
      181 cggcccggtc atctacacct tcggcagcga cgagcagaag gagcgcttcc tgccgggcat
      241 ccgccagtcg accgtgtcgt ggtgccaggg ctattccgag ccgggcgccg gctccgacct
      301 cgccaacctc cgcacccggg cggtccgcga aggcgatcat tacatcgtca acggccagaa
      361 gacctggacc tcgttcgcgc actggggtga ctggatcttc tgcctggtgc gcaccaatcc
      421 cgacgccaag ccgcaggagg gcatctcctt cctgctgatc gacatgaaga cgccgggcat
      481 taccgtgaag cccatcatca tggccgacgg cgggcatgag gtgaacgagg tcttcttcga
      541 caacgtcaag gtgccggtcg agaatctgat cggcaaggaa ggcgagggct ggacctatgc
      601 caagttcctg ctggccaacg agcggctggg catcgccgcc gtgccgcagt ccaagcgcgg
      661 cgtcgaggcg ctgaaggaca tcgcccgcgc cgagctttta gacggcaagc cgctgatcaa
      721 gaatcagacc ttcgccgaga agatcgccga cctcgaaatc caggtgacgg cgctggagta
      781 cacggagctg cgcgtgctgt cgtcgatggc acatggtggc cagcccgggc cggaagtgtc
      841 ggggctaaaa atccgcggct cggagatcca gcagcgcatc gccgagctcg ccatggaggc
      901 ggtcggcgaa tacgcggcac cctatctgcc cggccttctg tggcagggct cgaacgagga
      961 gccggtcggc ccgccccacg cccacatcgc cgccccgcgc tatttcaaca cccgcaagac
     1021 cacgatctac ggcggcagca acgagatcca gaagggcatc atcagcaaga tggtgctggg
     1081 gctgtgattg cagcaacacc gtcatcccga gcgaagccgc ccgcagggcg gcgcagtcga
     1141 gggacctctt cttctgggca tcagctgaag actaggtccc tcagctacgc gtggagttta
     1201 ccccgagcga agtcgagggg cgctccggtc ggaatgacgg aggggagcaa ttagatggac
     1261 ctcgcgctga aacccgagca caaaaccttc gccgacgaga ttcgcgcctt cgtgcggaaa
     1321 gagctgtcgc ccgcgacccg ggccaagacc ttctcgggca agcattacaa tcgcgacgac
     1381 catatggcct ggcagcaggc gctgggtcgc cagggctggc tcgcctacac ctggcccaag
     1441 aaatacggcg gcccgggctg ggacgtcacg cagcgcttcc tgttcgagaa cgtgctggcg
     1501 gaggagggtg cgcccaggat catcccgttc ggcgtaaaga tggtcgggcc ggtgatctac
     1561 accttcggca gcaacgagca gaaggagcgc ttcctgcccg gtatccgcag ctcggaagtg
     1621 tcgtggtgcc agggctactc cgagccgggc gccggttccg acctcgccaa cctgcgcacg
     1681 cgcgcggtgc gtgacggcga ccactacatc gtgaacggac agaagacctg gacctcgttc
     1741 gcccactggg ccgattggat cttctgcctg gtgcgcagcg atcccgacgc caagccacag
     1801 gagggcatct cgttcctgct gatcgacatg aagacgccgg gcgtcacggt gcggcccatc
     1861 atcatgctcg acggcgcgca tcacgtgaac gacgtcttcc tcgacaacgt gaaggttccg
     1921 atcgccaacc gcatcggcaa ggagggcgag ggctggacct gcgccaagtt cctgctggcc
     1981 aacgagcggc tgggcattgc cgaggtgccg gcgtccaagc gcggcgtgcg ctccctgcgc
     2041 gacatcgccc gcgccgaacc catgggaggc gccacgttgg ccgacgatcc ggccttcacc
     2101 aaccggatcg ccgacctcga cctgcaggtt caggcgctgg agatgagcga gctccgggcg
     2161 ctctcgacca tggccctggg cggcgcgccg gggccggaag tctcgacgct caagatcagg
     2221 ggctcggaga tccagcagcg catcgccgag ctcacaatgg aagccgtcgg cgagtacgcc
     2281 gccccctacc agcccggcat gctgttccac gacaccaacg agacgccagt cgggcccgac
     2341 catgcgccgc ccgccgcgcc gcgctatttc aacatgcgca agaccagcat ctacggcggc
     2401 agcaacgaaa ttcagaagaa catcgtgtcc aagatggtgc tcgggctata acagcccctg
     2461 tcatccctcg ctgggctcgg gatgacaacg agagtccgga ggagaaaatg gatctgtccc
     2521 tttccgacga acagaagcag ctgcaggacg gtgcggagcg cttcattcgc gacaagtaca
     2581 ccttcgaaaa tcgccgcaag atcgccgcga ccgagcgcgg ctggctaacg gagaactggg
     2641 cgcagttcgc cgagctgggc tggctcggca tggccttctc ggaagaagat ggcggctacg
     2701 gcggcgggcc gatcgagacc atgatcgtca tggagcagtt cggcaaaggt ctggtgctgg
     2761 agccgttcct gccgaccgtc gtgctgggcg gcggcatgat cgcggcggcc ggctcgaagg
     2821 cccagaggga ggcgctgttg ccgccgatga tcgagggcaa gaagcagttc gccttcgcct
     2881 ggctggagcg ccagtcgcgc tacaatctcg ccgacatatc cctcaaggcc accaaggagg
     2941 gcaacggctg gtcgctctcc ggccacaagg gcgtggtcta caacgcgctg tccgccgaca
     3001 caatcatcgt gctcgcccgc accgccggcg cggcgcgcga ggacaagggg ctgacgctgt
     3061 tcctggtcga cgccaaggcc aagggcatca cgcggcgcga ctatccgacc caggacgcgc
     3121 tgcgcgcctc ggagctcacc ttcgacaagg tctcggtcgg cgccgattca gtgctgggca
     3181 agatcgacgg cgctttcccg gttgtcgagg acgcggtcga ccgcgccatc gtggcgctgt
     3241 gcgccgaggc gacgggctgc atggacgcga tcaacgctgc gacgcttgaa tacatcaaga
     3301 cgcgcaagca gttcggcgtg ccgatcggca agttccaggt gctgcagcat cgcatggtcg
     3361 actgcttcac caacgcccag gaagctcgct cgatgaccct gatggcgtca ctcaagatcg
     3421 acgacaagga tcgcgtggtg cgcgccaagg cagcctccgg cgccaaggta cagatcggca
     3481 agtcgggcaa gttctgcggc cagagcgcgg tgcagatgca cggcggcatg ggcgtcaccg
     3541 acgagctgtc ggttagccac tatttcaagc gcctgaccat gatcgacctg atgttcggta
     3601 accagcagca ccaccttacg cgctacagca acctcgccat ggcggcttga tgctgggggc
     3661 gcctatggct tcagcgtgag cgacatctcg gcgacgccgg tggcgaaatt gtagccggca
     3721 tccttcacca cgcccgaagc gatcatgccg atttccctgt cgcggccgcc atagagccag
     3781 ttgccgccgg cctgcgagct cattgccacg gtgctttgct cgccgatata gttgccgccg
     3841 agcgcatccg cgcccttgtc ggaaccgagg gaatagacgc gccagatgct gtgcactgcc
     3901 ctggtgtaac cgatgtcgat gccgaccttc cggatctccc cgtcgtacag tgccgtggtg
     3961 ccgttcctgt tcaggaagac gcaatccagt tttttggtcg agcccaggac atagccggtg
     4021 ctgccgctca cattgcaggt gagcgcgccg atatagatcc gggaacctgt attctgctga
     4081 ttgatttgct gggcggtcgg ctgctggcag gcgccggtcg ccagggcgag agttgccgcc
     4141 acggcggccg atagacattt gttcattggt atctccttgc cggagcacta tggcacgact
     4201 gatcagcgaa ttgccgccca caaatgcaga aggtccggcg agctaggctt ttctcgacgt
     4261 cttgcgaaac caagccgcca gtgcgacttc cttgatcgaa ccgtcggcga cgccgatcat
     4321 ggtgcgcacc acgtcaggtt cactcgcctc atgggtccaa ccgttcagct cgaggaacgt
     4381 cgccgcgact gcgtgtgaag tccgcttgtt accgtcgtgg aatacgtggc ccttgcacaa
     4441 cgcaaatgca taggcggccg ccagttcggt gacatgagga cgcggctctt cgt
//
LOCUS       DASWGA010000523         2923 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_308711, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000523 DASWGA010000000
VERSION     DASWGA010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308711"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1261)
                     /locus_tag="VF991_12400"
     CDS             complement(<1..1261)
                     /locus_tag="VF991_12400"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9557292.1"
                     /translation="MSNRHWHAAYGKHIPVEIDPDAHVSILPMLEGAMQRYADRPAFR
                     CFGQTLSYADTDRLSRDFAAFLQGKLGVTKGTRIAVMLPNIPAFPLAMLGIVRAGAAQ
                     VNVNPLYTPRELEHQLNDAGVETIVIFSGVSATLAEIIAKTKVRHVIAVRPGDGTAAA
                     LPSPPVDARLANAIGFADALAVGATLVFTPVPLVGEDLLFLQYTGGTTGVSKGAALSH
                     RNLVANTEQFKAFMPDVLRPGQEVVVTALPLYHIFALMVNFISCYAAGAENWLVPNPR
                     DMDGFIDVFKQARPTLFTGVNTLFGGLVMHRKIKEVDFSRLRATIGGGASVLPITSER
                     WKALTGLDILEGYGLSETSPVLTLNPRTGTGFTATVGLPFPSTDIKLLDDQDQVVPVG
                     EAGEICAKGPQVMRGYWEKPEANAAAFT"
     gene            1341..2456
                     /locus_tag="VF991_12405"
     CDS             1341..2456
                     /locus_tag="VF991_12405"
                     /inference="COORDINATES: protein motif:HMM:NF024039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX9557293.1"
                     /translation="MLHCSMSLAGAAKLLADRAKLRGEARRMGKRTTAAIWVKGIAEV
                     LAAERLDVAALLAAADIDAAALDAPGARLSTDKISLLWELAAERSGNPAIGVAQHRVA
                     KPASFDVVGYTMMSCADLLGAFERLERYLRILSDALTMSRSLEDGRFRMTFELIGGER
                     PVPRQRAEFIMVSLVAFLRWISGREVRPLAIELPYPTPADLGPYREAFGCPVTFDANR
                     NSLLFARAELAKPLPTSNPVLAELHERFAGDYLQRFDHDQTSYRAREAIIRRLPDGEP
                     RRDRVASELRMSERTLQRRLEEEATSFVELVDKTRRELAEQYLGRLHLSLGQAAYLLG
                     YADQSSFFRACKRWFEVSPGQYRSQLLGHLSSNPGTA"
     gene            complement(2460..>2923)
                     /locus_tag="VF991_12410"
     CDS             complement(2460..>2923)
                     /locus_tag="VF991_12410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557294.1"
                     /translation="ASDAVISPRAPSCHDNSHPDIGWLFDDPIAAAKDYYRRTRIFPI
                     MHLVGVRRETAERHPWVPAAVLKAFTTAKTVALRHLGDTAATKATLPFVEEQLRDARA
                     LMGPDFWSYGLAPNRHVLDAFLRHHHDQGLSARVVRADELFHASTHETVKI"
BASE COUNT          483 a          917 c         1030 g          493 t
ORIGIN      
        1 cggtgaaggc ggcggcattg gcttcgggct tctcccaata gccgcgcatc acctggggac
       61 ccttggcgca gatctcgccg gcttcgccga ccggcacgac ctggtcctgg tcgtccaaga
      121 gcttgatgtc ggtggacggg aacggcaggc cgaccgtggc ggtgaaaccg gtgccggtcc
      181 tcggattgag cgtcagcacc ggcgaggtct ccgacaggcc gtagccttcc aggatgtcca
      241 ggccggtcag cgccttccag cgctcggagg tgatcggcag caccgaggcg ccgccgccga
      301 tcgtggcgcg aagacgggag aaatcgacct ccttgatctt gcgatgcatc acaagcccgc
      361 cgaacagcgt gttgacgccg gtgaagagcg tgggccgcgc ctgcttgaaa acatcgatga
      421 agccatccat gtcgcgcggg ttgggcacca gccagttctc ggcgccggcg gcgtagcagg
      481 agatgaaatt caccatcagc gcgaaaatgt gatagagcgg cagcgccgtc accacgacct
      541 cctggccggg acgcagaacg tcgggcatga aggccttgaa ctgctcggta ttggcgacga
      601 ggttgcggtg cgacagcgcc gcgcccttcg agaccccggt ggtgccgccg gtgtattgca
      661 ggaacagcag gtcctcgccg acgagcggta ccggcgtgaa gacgagcgtc gcgcccacag
      721 ccaaggcgtc ggcgaagccg atcgcgtttg caaggcgtgc atcgaccggc ggactgggca
      781 atgcggcagc ggtgccgtcg cccgggcgca cggcgatgac gtgcctcact ttggtcttgg
      841 cgatgatttc ggccagcgtg gcggagacgc cggagaagat cacgatggtt tcgacgccgg
      901 cgtcgttcag ctggtgctcg agctcgcggg gcgtgtagag cggattgacg ttcacctggg
      961 cggcgccggc gcgcacgatg cccagcatcg ccagcggaaa ggccgggatg ttgggcagca
     1021 tcacggcgat gcgcgtgccc ttggtcacgc cgagcttgcc ctgcaggaag gcggcgaagt
     1081 cgcgcgacag ccggtcggtg tcggcatagc tcagcgtctg gccaaagcag cggaatgccg
     1141 gcctatcggc ataacgctgc atggcgccct cgagcatggg caaaatcgaa acgtgcgcgt
     1201 ccgggtcgat ctcgaccggg atgtgctttc cataggcggc gtgccagtgt ctgttcgaca
     1261 tttccttctc cctgcggtgc gtcgggcttg cctggcgagt tctacgcttc catggcatgt
     1321 tccccgtgaa acaagactaa atgctgcact gcagcatgtc gttggccgga gcggccaaat
     1381 tactggccga ccgagccaag ttgcgcgggg aggcgcgccg gatgggcaag cggacgacgg
     1441 ccgcgatctg ggtcaagggc atcgccgagg tgctcgcggc ggagcgcttg gacgtggcag
     1501 cgctgctggc ggcggccgat atcgacgcgg cggcgctgga cgcgccgggc gcgcggctgt
     1561 cgaccgacaa gatcagcctg ctttgggaat tggcggccga gcgatccggc aatccggcga
     1621 ttggcgtcgc ccagcatcgt gtggccaaac cggcaagctt cgatgtggtc ggctacacca
     1681 tgatgtcgtg cgccgatctg ttaggcgcct tcgaacgcct ggaacgttac ctgcgcatcc
     1741 tcagtgacgc cctgacgatg agccggagcc tggaggacgg ccggtttcgc atgaccttcg
     1801 agttgatcgg cggcgagcgg ccggtgccga gacagcgcgc cgagttcatc atggtctccc
     1861 tggtcgcttt tctgcgctgg atcagcggtc gtgaggtccg tccgctggcg atcgagctgc
     1921 cgtacccgac gccggcggac ttgggcccgt accgcgaggc gttcggctgt ccggtgacgt
     1981 tcgacgccaa ccgcaacagc ctgctgttcg cgcgcgccga gctggccaaa ccgttgccga
     2041 cgtcgaaccc ggtgctggcc gagctgcatg agcgcttcgc cggcgactat ctgcaacgct
     2101 tcgaccacga ccagacaagc taccgggcgc gcgaagcgat catccgccgg ttgcccgacg
     2161 gcgagccgcg gcgcgaccgg gtcgcgagcg aattgcgtat gagcgagcgc acgctgcagc
     2221 ggcgactgga ggaggaggcg acgtccttcg tcgaattggt ggacaagacg cgccgcgagc
     2281 tggccgagca gtatctcggc cggctccacc tgtcgctcgg gcaagcggcc tatctgctcg
     2341 gctacgccga ccagagcagc ttcttccgcg cctgcaaacg atggttcgag gtttcacccg
     2401 gccaataccg cagtcagctg ctcggccacc tgtcgagcaa ccccgggacc gcttagccgt
     2461 cagatcttga cggtttcgtg cgtcgaggcg tggaacagct cgtcggcgcg cacgacgcgc
     2521 gccgacaggc cctgatcgtg atggtggcgc aggaaggcgt cgagcacgtg ccggttgggt
     2581 gcaagaccgt atgaccagaa gtccggcccc atcagtgcgc gtgcgtcgcg cagctgctcc
     2641 tcgacgaatg gcagcgtcgc cttggtcgcg gccgtgtcgc cgagatgcct cagcgcgaca
     2701 gtcttcgcgg tggtgaaggc cttgaggacg gccgccggta cccagggatg gcgttcggcc
     2761 gtttcacgcc tgacccccac cagatgcatg atcgggaaaa tccgggttcg ccggtaatag
     2821 tccttggccg cggcgatcgg atcgtcgaac agccatccga tatcgggatg gctgttgtcg
     2881 tggcaggagg gcgcgcgggg cgagatcacg gcgtcgctcg cgc
//
LOCUS       DASWGA010000524         4476 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1960015, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000524 DASWGA010000000
VERSION     DASWGA010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4476
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1960015"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /gene="ilvC"
                     /locus_tag="VF991_12415"
     CDS             <1..697
                     /gene="ilvC"
                     /locus_tag="VF991_12415"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017482799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEX9557295.1"
                     /translation="GFNIHFRLIEPRSDLDVFMIAPKGPGHTVRSEYQRGGGVPCLVA
                     VAQNSSGNAQEIALSYASAIGGGRSGIIETNFREECETDLFGEQVVLCGGLVELIKAG
                     FETLVEAGYAPEMAYFECLHEVKLIVDLIYEGGIANMNYSISNTAEYGEYMSGPRIVT
                     DATKAEMKRVLADIQSGRFARDWMLENKVNQASFKAMRKKMSEHPIEEIGVKLRGMMP
                     WIKEKALVDKTRN"
     gene            complement(743..1156)
                     /locus_tag="VF991_12420"
     CDS             complement(743..1156)
                     /locus_tag="VF991_12420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX9557296.1"
                     /translation="MTNAKLAGKCFCGAVQYAVPDEFVYAMNCHCSNCRRTTGSAFKP
                     FAGIERHKLAITKGENDVMIFGEERANDTHCKRCGSLLYSVVRDGAFVHVALGTLVDD
                     PTIRPTKHIFVGSKAPWFTITDDLPQYEEHAVAGG"
     gene            complement(1185..1946)
                     /locus_tag="VF991_12425"
     CDS             complement(1185..1946)
                     /locus_tag="VF991_12425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018063740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9557297.1"
                     /translation="MTLLITGGASGIGAATARLAAARDYKVAINYRSRASQAKALIAD
                     ITAKGGQAIALPGDVSREDDISRLFDETERALGPVDRLVNGAGIDGGASRVEDFDAAT
                     LARLFTVNAVGLMLCCREAARRMSTKRGGKGGVIVNLSSLAATIGGRPGKSHYAASKA
                     AVDSFTLGFAKEVAAEGIRVNALRPGMILTEMTEAALGDPAVRAEVESTIAMGRVGQT
                     HEIAHAILWLLSDESTFVSGAILDASGGGFVFGRR"
     gene            complement(1943..2776)
                     /locus_tag="VF991_12430"
     CDS             complement(1943..2776)
                     /locus_tag="VF991_12430"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9557298.1"
                     /translation="MSIKASTRKRDRLLMQALAVALALLALAPFLWLLLMSFKTNAEI
                     FRFPPRLLFDATLANYAALWTSEFRNSFANSLVVSVASTVLSLLIGVPAAYALSRWTA
                     RSGGTITLWILASRMAPPIAFTIPYFLVYRHLELLDTLTGLVIIYLTFNLSLVIWMMR
                     PFYDQLPRSLEEAAWIDGATLWQGFYRIILPLSGPGLAATAILCFLFAWNDFFFALIL
                     TRTEAMTAPVAVVNFMNYEGWEWGRIAAGGTMIMLPVLAFSFVVRRYLVHGLTGGALK
                     G"
     gene            complement(2766..3698)
                     /locus_tag="VF991_12435"
     CDS             complement(2766..3698)
                     /locus_tag="VF991_12435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9557299.1"
                     /translation="MRSPLTQPLPLAGERSPNRRSQHRFFIFCVAPSLAVLALITLLP
                     ALYLLATSFTPLNLTRPETQWDFSQPLESYRQLLSDSRLHNSVWVQIKLSFWTVLLQL
                     LIGLGLALLLNARSRLLEALRTVFLIPMVLPPIVVAIIWKVIYTPDISPMHGIFRALG
                     WNVPALITDPDWALTSIIIADTWEWFPFTMLMVLAALQMMPQELLDAAKVDGASPWQL
                     TRYITLPFIQGVLLVAGLFRLIDSIKAFPLIFILTDGGPGNLTEVTNYYSFLQAFNFS
                     YLGFSSAITVALLAATIALSWLIVRMVGWGVRVD"
     gene            complement(3760..>4476)
                     /locus_tag="VF991_12440"
     CDS             complement(3760..>4476)
                     /locus_tag="VF991_12440"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9557300.1"
                     /translation="PYLMGSGGAIFKAPPDNLTPTLATPQAAQSGEWYANLLMKYGPD
                     GILSYSDDQSMRSQMSGRANIRTQAITWMVPLAKHAESTVQKTVRYGLMPAGPAGNFP
                     GSNSHGLGIPAGSKKKEAAWEFIKWALSKETIAMVVKNHGYPSVCRLSIIKSPEFKNV
                     LTLNGQDVASLFLEVLQLGGKSGYMKYRTVPVFPQVGDKINKAIERIATKQQAAPEAM
                     KQAQAEAIQDLQKAGIKVDL"
BASE COUNT          826 a         1377 c         1536 g          737 t
ORIGIN      
        1 tggcttcaac atccatttca ggctgatcga gccgcgcagc gacctcgatg tcttcatgat
       61 cgcgccgaaa gggcccggcc acaccgtgcg ctcggaatat cagcgcggcg gcggcgtccc
      121 ctgcctggtg gccgtggcgc agaattcgag cggcaatgcc caggagatcg cgctgtccta
      181 tgccagcgcc atcggcggcg ggcggtcggg catcatcgag acgaacttcc gcgaagagtg
      241 cgagaccgac ctgttcggcg agcaggtcgt gctgtgcggc ggcctcgtcg agctgatcaa
      301 ggccggtttc gagaccctgg tcgaggcggg ctatgcgccg gagatggcct atttcgagtg
      361 cctgcacgag gtcaagctga tcgtcgactt gatctacgag ggcggcatcg ccaacatgaa
      421 ctactcgatc tccaacaccg ccgagtatgg cgagtatatg tccggtccgc gcatcgtcac
      481 cgacgcgacc aaggccgaga tgaagcgcgt gttggccgac atccagtccg gtcgcttcgc
      541 gcgcgactgg atgctggaga acaaggtcaa ccaggcctcg ttcaaggcca tgcgcaagaa
      601 gatgtcggag cacccgatcg aggagatcgg cgtcaagctg cgcggcatga tgccgtggat
      661 caaggagaag gcgctggtcg acaagacccg gaactgacag cgcgcagcgc tgtcatcccg
      721 agcagagcga gggatcttta gcctatccgc cggcgaccgc atgctcctca tattggggca
      781 ggtcgtcggt gatggtgaac cacggtgcct tggagccgac gaagatatgc ttggtcggcc
      841 ggatggtcgg atcgtcgacc agggttccca gggcgacatg gacgaaggcg ccgtcgcgga
      901 ccaccgaata gagcagtgag ccgcaccgct tgcagtgcgt gtcgttggcc ctttcctcgc
      961 caaagatcat gacgtcgttc tcgcccttgg tgatcgcgag cttgtggcgc tcgataccgg
     1021 cgaacggctt gaaggctgaa ccggtcgtgc gccggcaatt cgaacaatgg cagttcatgg
     1081 cgtagacgaa ttcgtcgggc acggcgtact ggacggcgcc gcaaaagcac tttccggcaa
     1141 gcttggcgtt ggtcacggca tcctcgctgt tgctcggcgt gagtctagcg cctgccgaag
     1201 acgaagccac cgcccgacgc gtcgaggatc gcgccggaaa cgaaggtcga ttcgtccgac
     1261 agcagccaca ggatcgcgtg ggcgatctcg tgcgtctggc cgacgcggcc catggcgatc
     1321 gtcgattcga cctctgcgcg caccgcgggg tcgccgagcg ccgcctcggt catctcggtc
     1381 aggatcatgc ccggtcgcag ggcgttcacc cggatgccct cggccgcaac ctccttggcg
     1441 aagcccaggg tgaagctgtc gaccgcggcc ttgctggccg cgtagtgcga cttgccgggc
     1501 cggccgccga tggtggcggc cagcgacgag aggttgacga tgacgccgcc tttgccgccg
     1561 cgcttggtcg acatgcggcg cgcggcctcg cggcagcaca gcatcaggcc gacggcgttc
     1621 acagtgaaca gacgagccag cgtcgcggcg tcgaaatcct cgacccgtga cgcgccgcca
     1681 tcgatgccgg cgccgttgac caggcggtcg accggtccca gggcgcgctc ggtctcgtcg
     1741 aacaggcggc tgatgtcgtc ttcgcgcgag acgtcgcccg gcagggcgat cgcctggcca
     1801 cccttggccg tgatgtcggc gatcagggcc ttggcctggc tggcgcgcga gcggtaattg
     1861 atcgcgacct tgtagtcgcg cgcggcggcg agccttgccg tcgcagcgcc gatgccgctc
     1921 gcgccgccgg tgatgagaag ggtcatcctt tcaacgcgcc tccggtaaga ccgtgcacca
     1981 gatatcgcct gaccacgaag gagaaggcca gcaccggcag catgatcatg gtgccgccgg
     2041 cggcgatgcg gccccattcc cagccctcgt aattcatgaa gttgacgacg gccaccggcg
     2101 ccgtcatcgc ctcggtacgg gtcaggatca gggcgaagaa gaaatcgttc caggcgaaca
     2161 ggaagcagag gatcgcggtg gccgccaggc cggggcccga gagcggcagg atgatccggt
     2221 agaagccttg ccacagcgtg gcgccgtcga tccacgccgc ctcctccagc gagcgcggca
     2281 attgatcgta gaacggccgc atcatccaga tcaccagcga gaggttgaag gtgaggtaga
     2341 tgatgacaag gccggtcagc gtgtcgagca gctcaagatg gcggtagacc aggaagtagg
     2401 ggatggtgaa ggcgatcggc ggcgccatgc ggctggccag gatccagagc gtgatcgtgc
     2461 cgccgctgcg cgcggtccag cgcgacagcg cataggccgc gggcacgccg atcagcagtg
     2521 acagcaccgt cgaggcgacg ctcaccacca ggctgttggc gaaggagttg cggaactccg
     2581 aggtccacag cgcggcatag ttggccagag tggcgtcgaa cagcagccgc ggcgggaagc
     2641 ggaagatctc ggcattggtc ttgaacgaca tcagcagcag ccacaggaac ggcgccaggg
     2701 ccagcagcgc cagggcgacg gccagcgcct gcatcagcag gcgatcgcgc tttctggtcg
     2761 acgctttaat cgacacggac cccccaaccg accatgcgca cgatcagcca gctcaaggcg
     2821 atggtcgcgg cgagcagggc cacggtgatc gcgctggaaa agccgagata ggagaaattg
     2881 aaggcctgca ggaacgagta gtagttggtg acctcggtga ggttgcccgg accgccgtcg
     2941 gtcaggatga agatcagcgg gaaggctttt atcgaatcga tcaggcgaaa caggcccgcc
     3001 accagcagca cgccctggat gaaggggagc gtgatgtagc gtgtgagctg ccagggcgag
     3061 gcgccgtcga ccttggcggc gtctaaaagc tcctgcggca tcatctgcag ggcggccagc
     3121 accatcagca tggtgaaggg aaaccattcc caggtgtcgg cgatgatgat cgaggtcagc
     3181 gcccagtcgg ggtcggtgat cagcgccggc acgttccagc ccagcgcccg gaagatgccg
     3241 tgcatggggc tgatgtcggg cgtgtagatc accttccaga tgatggcgac gacgattggc
     3301 ggcagcacca tcgggatcag gaaaaccgtg cgcagcgcct cgagcaggcg cgagcgcgca
     3361 ttcagcagca gcgccagccc aagcccgatc aggagctgca gcagcaccgt ccagaacgag
     3421 agcttgatct ggacccacac cgagttgtgc aggcgcgaat ccgacagcag ctggcggtag
     3481 ctctccagcg gctgggagaa gtcccactgc gtctcgggtc gggtgaggtt gagcggcgta
     3541 aagctggtcg ccagcagata gagcgccggc agcaaggtga tcagcgccag taccgccagc
     3601 gacggcgcga cgcagaagat gaagaagcgg tgttggctcc gccgattcgg actcctctcc
     3661 cccgccaggg ggagaggttg ggtgaggggg ctgcgcacgt tgttaccccc tcacctagcc
     3721 tctcccccta gcgggggaga ggaattcgag gaaagatact cagagatcaa ccttgatccc
     3781 ggccttctgc agatcctgga tcgcctcggc ctgcgcctgc ttcatcgcct cgggtgcggc
     3841 ctgctgcttg gtggcgatgc gctcgatcgc cttgttgatc ttgtcgccga cctgcgggaa
     3901 caccggcacc gtgcggtact tcatgtagcc cgacttgccg ccgagctgca gcacttcgag
     3961 gaacagcgag gccacgtcct ggccgttcaa ggtcagcacg ttcttgaact ccggactctt
     4021 gatgatggag aggcggcaga cgctgggata gccgtggttc ttgaccacca tggcgatcgt
     4081 ctccttcgac agcgcccact tgatgaactc ccacgccgcc tccttcttct tcgagccggc
     4141 gggaatgccg aggccatggc tgttggagcc ggggaagttg cccgcgggcc cggccggcat
     4201 caggccgtag cgcaccgtct tttgcaccgt gctctcggcg tgcttggcca gcggcaccat
     4261 ccaggtgatg gcctgggtgc ggatattggc gcgccccgac atttgcgagc gcatcgattg
     4321 gtcgtcggag taggagagga tgccatcggg cccgtatttc atcagcaggt tggcgtacca
     4381 ttcgcccgac tgggcggcct gtggggtggc aagcgtcggc gtcaggttgt cgggcggcgc
     4441 cttgaagatc gcgccgcccg agcccatcag gtaggg
//
LOCUS       DASWGA010000525         1975 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_693948, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000525 DASWGA010000000
VERSION     DASWGA010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1975
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_693948"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..1025)
                     /locus_tag="VF991_12445"
     CDS             complement(48..1025)
                     /locus_tag="VF991_12445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557301.1"
                     /translation="MSTPLLKVEDLRIALQGEGATFNAVEQVSFEIGRGEAFGLVGES
                     GCGKSITALAVMGLLRRPLSLADGRIVLDGQEIHNLPAAELRRLRGKRIAMIFQEPMT
                     ALNPLSPVGRQIAEMFVLHQGANWNEAMDRAEEALRQVRVPSPERRIKDYPHQLSGGM
                     RQRVMIAIALACGPDLLIADEPTTALDVTVQAEIIDLMAELCAAKGTAILMISHDLGL
                     VANMCRRVAVMYAGRIVESQVAGAIFATPRHPYTQGLVDSLPRLGERSRRGQQRLREI
                     SGVVPSIAAYPQGCRFNPRCPAVTEICRSTAPDITTLPADGLVRCHHHG"
     gene            complement(1022..1843)
                     /locus_tag="VF991_12450"
     CDS             complement(1022..1843)
                     /locus_tag="VF991_12450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557302.1"
                     /translation="MKWGSNTWVGGSLVVLALGVAILAPWIALTDPVMDANLMNAELP
                     PSWQFPFGTDAQGRDIYSRILYGARISLTVGIVSQVCNSLIGVTLGLTAGYWGGWWDD
                     VVSGITNLMLAIPSLVFALAIMAILGPGLMSLVIALGLTSWSYSCRIARAQVLSLKSQ
                     GYVQAARILGYGDLRIMFTQVLPNILGPLIVIATLGMGGAILAEAALSFLGLGIRPPF
                     PSWGSMLSEARDQIRAAPWLSVFPGLAIFFTVLGLNLLGDGLRDILDPQSTTRRA"
     gene            complement(1853..>1975)
                     /locus_tag="VF991_12455"
     CDS             complement(1853..>1975)
                     /locus_tag="VF991_12455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9557303.1"
                     /translation="FQRDMPAVQGCILMIVLFFLLINTLVDIAYVVIDPRIRYG"
BASE COUNT          366 a          628 c          691 g          290 t
ORIGIN      
        1 tgccgacggt gaagtggaca gcgagttcgt cgagcttgag cagcggctca gccatggtga
       61 tggcaccgca ccaggccatc ggccggcaag gtcgtgatat cgggtgcggt cgaacggcag
      121 atctcggtca ccgccggaca gcgcggattg aagcggcaac cctggggata ggccgcgatc
      181 gagggcacga caccggaaat ctcgcgcagc cgttgttggc cgcgccgcga ccgctcgccc
      241 aggcggggca gggaatcgac caggccctgg gtatagggat ggcgcggcgt ggcgaagatc
      301 gccccggcca cctggctttc gacgatgcgg ccggcataca tcacggcgac gcgccggcac
      361 atgttggcga ccagcccgag atcgtggctg atcatcagga tggccgtgcc cttggcggcg
      421 caaagctcgg ccatcaggtc gatgatctcg gcctgcaccg tgacgtcgag cgccgtggtc
      481 ggctcgtcgg cgatcaaaag gtcgggtccg caggccagcg caatggcgat catcacgcgc
      541 tggcgcatgc cgccggagag ctggtgcgga tagtccttta tgcgccgctc gggcgagggc
      601 acgcggacct ggcgcagcgc ctcctcggcg cgatccatcg cctcgttcca gttggcgccc
      661 tggtgcaata cgaacatctc ggcgatctgg cggccgaccg gcgacagtgg attgagcgcc
      721 gtcatcggct cctggaagat catggcgatg cgcttgccgc gcagccggcg cagctcggcg
      781 gccggcaggt tgtggatttc ctgcccgtcg aggacgatcc ggccatctgc gagcgacagc
      841 ggtcggcgca gcaatcccat gacggcgagg gcggtgatgc tcttgccgca gcccgattcg
      901 cccaccagcc cgaacgcctc gccgcggccg atctcgaagg agacctgctc gacggcattg
      961 aaggtggcgc cttcgccctg cagggcaatg cgcagatcct cgactttcag gagcggcgtg
     1021 ctcatgcgcg gcgcgtcgtc gattgcggat cgagaatatc gcgcaggccg tcgcctaaaa
     1081 ggttgagacc gagcacggtg aagaagatgg cgaggccggg gaacaccgac agccagggcg
     1141 ccgccctgat ctggtcgcgc gcctccgaca gcatgctgcc ccagctcgga aagggcgggc
     1201 ggatgccgag acccaggaag gagagggcgg cttcggccag gatggcgccg cccatgccta
     1261 gagtagcgat cacgatcagc ggccccagga tattgggcaa aacctgcgtg aacatgatgc
     1321 gcaggtcgcc atagcccagg atgcgcgcgg cctggacgta gccttggctc ttgagcgaca
     1381 gcacctgggc gcgagcgatg cggcaggaat aggaccagct ggtcagaccg agcgcgatca
     1441 ccaggctcat cagcccgggc ccgaggatcg ccatgatggc cagcgcgaag accagcgagg
     1501 gaatcgccag catcaggttg gtgatgccgc tcaccacatc gtcccaccag ccgccccagt
     1561 aaccggcggt gaggccgagc gtgacgccga tcaggctgtt gcagacctgg ctcacgatgc
     1621 cgacggtcag cgaaatccgt gcgccgtaga ggatgcggga atagatgtcg cggccctgcg
     1681 cgtcggtgcc gaacggaaac tgccagctcg gcggcagctc ggcgttcatc aggttggcgt
     1741 ccatcaccgg atcggtgagc gcgatccaag gtgccaggat cgccacgccg agcgccagga
     1801 cgaccaggct gccgcccacc catgtgttgg agccccactt caccggccgg cctcagccat
     1861 agcggatacg cggatcgatc acgacgtagg cgatgtcgac cagggtgttg atgaggagaa
     1921 agaacagcac gatcatcagg atgcagccct ggaccgccgg catgtcgcgc tggaa
//
LOCUS       DASWGA010000526         2924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2335604, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000526 DASWGA010000000
VERSION     DASWGA010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2335604"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..894)
                     /locus_tag="VF991_12460"
     CDS             complement(<1..894)
                     /locus_tag="VF991_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9557304.1"
                     /translation="MNDFGAFLPGPRARLAPLASGPLDGLTFVAKDLIDVAGQVTGGG
                     NPDWAARQAPAARSAPAVERLLRAGASLVGKTVTDELAFSLEGENAHYGTPKNPRCPD
                     RLPGGSSSGSAVAVAAGLADLGLGTDTGGSIRVPASFCGLFGWRPSHGRVPLDGVVPF
                     APSYDTVGVLARDASHLRLAAHCLLGTPPAAPRPCRLLLATDAFTLAEPEAAILLQDA
                     ARSFGIADEVDIFGGRPADFLDAYATLQGLDIAGALAGFLASRPRFGPTIQPRFDGVR
                     ALDPAAGERWRAWRAETTVRLR"
     gene            complement(1070..1732)
                     /locus_tag="VF991_12465"
     CDS             complement(1070..1732)
                     /locus_tag="VF991_12465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007826659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEX9557305.1"
                     /translation="MPMIAARPYDYQFPAGKLALIVIDMQRDFIEQGGFGSVLGNDVR
                     PLGAIVPTVRRLIDGFRAAGLPIIHTREGHRPDLADCPPAKRARGGGKLTIGDKGPMG
                     RILIDGEPGNDLVPELAALPGETVIVKPGKGAFYATLLGGFLQQHGIGHLVFAGVTTE
                     VCVQTTMREANDRGYECLLAEDATESYFPEFKAATLAMIRAQGGIVGWTAPTDMIVDA
                     LR"
     gene            complement(1738..2658)
                     /locus_tag="VF991_12470"
     CDS             complement(1738..2658)
                     /locus_tag="VF991_12470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003550518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557306.1"
                     /translation="MEETFAIFLASTLRLAMPLMLAASGELVSERSGVLNLSLEGMML
                     TAAFFGALGSWATGDPYLGVGCAILAALCVAAVQAWLSVNLRANQLVVGIGFNILALG
                     ATTLLYRIIFGGLSREEIPGLPKLAVPSLSDLPFAGTAFFQQSVIVYVGLGLIVLIWV
                     MLNHTSFGLAVRAVGDEPRSADKAGIPVAATRWRAVLVTGFMAGVAGAFISIADIHTF
                     TENMTNGAGYLALAAVIFGGWNVGRTIAACLLFGAATALQFQLPAMGINVPTAFLLML
                     PYLLALLAVAGVVGRLEPPTSLTLPFQRGK"
     gene            complement(2658..>2924)
                     /locus_tag="VF991_12475"
     CDS             complement(2658..>2924)
                     /locus_tag="VF991_12475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003550517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557307.1"
                     /translation="LQGEQYYLKAGFSSGYGFDGLVVGLLSRGSTVGVLAGALFFGFL
                     RSGGISMEIMAGVPAALTLVIQGLIVIAVAGSVILVDKLEGGSR"
BASE COUNT          529 a          967 c         1041 g          387 t
ORIGIN      
        1 ccggagtcgc accgtcgtct cggcccgcca ggcgcgccag cgctcgccgg cggcgggatc
       61 gagcgcgcgg acaccatcga agcgcggctg gatcgtcggg ccgaagcgcg gtctgcttgc
      121 caggaagccg gcgagcgcac cggcaatgtc gaggccttgc aaagttgcat aggcgtcgag
      181 gaaatccgcc ggccggccgc caaagatgtc gacctcgtcc gcgatgccga aagaccgcgc
      241 cgcgtcttgc aacaatattg ccgcctcggg ctcagccagg gtgaaggcgt cggtggctaa
      301 cagcaaccgg cagggtcgtg gcgctgccgg cggcgtgccg agcagacaat gtgccgccag
      361 cctcagatgc gaggcgtcgc gcgcaagcac gccgaccgtg tcgtagctgg gcgcgaacgg
      421 cacgacgccg tcgagcggca cgcggccgtg gctgggtcgc caaccgaaca ggccgcagaa
      481 gctcgcgggg accctgatcg agccgccggt atcggtgccg agcccgagat cggcgagacc
      541 ggccgccacg gcaacagcgg agccgctcga tgagccaccg ggcaggcggt ccggacagcg
      601 cgggtttttg ggcgtgccgt aatgggcatt ctcgccttcc aggctgaagg caagttcatc
      661 ggtgacggtc ttgccgacca ggctggcccc cgcccgcagc aggcgctcga cggcgggagc
      721 ggatctcgcc gccggcgcct ggcgcgcggc ccaatcggga ttgccgccgc cggtcacctg
      781 gcctgcgaca tcgatcaggt ccttggcgac gaacgtcagt ccatcgagcg gccccgaggc
      841 cagcggcgca agccgcgccc tcggcccggg aaggaaggcg ccgaaatcat tcatagcttg
      901 ggggcgcgcc actgcgcgcg gagtaacctc cgcgctgaag tggcgtgtct tagtcttccg
      961 gaccgcgggc gtcccgcccg cctcatgatc atgagcgggc gggacgcccg cggtccgaat
     1021 gagcatgaga agatcgtgcc actgaagtgg cgcgccccca gcaaacacat catcgcagcg
     1081 catcgacaat catatctgtc ggcgcggtcc aaccgacgat gccaccctgg gcgcggatca
     1141 tcgccagcgt ggcggccttg aactcgggga agtagctctc ggtcgcgtct tcggccagca
     1201 agcactcgta gccccggtcg ttggcctcgc gcatggtcgt ctgcacgcag acttcggtgg
     1261 tgacgccggc gaagacgaga tggccgatgc cgtgctgctg caaaaagccg ccgagcagcg
     1321 tggcatagaa cgcgcccttg cccggcttca cgatcaccgt ctcgccgggc aacgccgcga
     1381 gctcgggcac cagatcgttg ccgggctcgc catcgatcag gatgcggccc attgggccct
     1441 tgtcgccaat ggtgagtttg ccgccaccgc gagcgcgctt ggcgggcggg cagtcggcga
     1501 gatcgggccg gtgaccctcg cgggtgtgga tgatcggcag cccggcggcg cggaagccgt
     1561 cgatcaggcg gcgcacggtg ggcacgatgg cgccaagcgg ccgcacgtcg ttgccgagga
     1621 ccgaaccgaa gccgccttgc tcgatgaagt cgcgctgcat gtcgatcacg atcaaggcga
     1681 gcttgcccgc ggggaactga taatcgtagg gccgggcggc gatcatgggc atggcggtca
     1741 cttgccgcgc tggaacggca aggtcaatga agtgggtggc tcgagccttc cgacgacgcc
     1801 ggcaacggcg agcagcgcca aaagataggg cagcatcagc aggaaggcgg tcggcacgtt
     1861 gatgcccatg gccggaagct ggaactgcaa cgccgtggcg gcgccgaaca gcaggcaggc
     1921 ggcgatggtg cggccgacgt tccagccgcc gaagatcacg gcggccagcg ccaggtagcc
     1981 cgcgccgttg gtcatgttct cggtgaaggt gtggatgtcg gcgatcgaga tgaaggcgcc
     2041 ggcgacgccg gccatgaagc cggtgaccag cacggcccgc cagcgcgtgg ccgcgaccgg
     2101 gatgccggcc ttgtcggcgc tgcgcggctc gtcgccgaca gcgcgcacgg ccagcccgaa
     2161 cgaggtgtga ttgagcatca cccagatcag tacgatcagg ccgagcccga catagacgat
     2221 gaccgactgc tggaagaaag cggtaccggc gaacggcaga tcgctcaggc tcggcacggc
     2281 aagcttgggc aggccgggga tctcctcgcg cgacaggccg ccgaagatga tgcggtataa
     2341 aagcgtcgtg gcgcccagcg ccaggatgtt gaagccgatg ccgaccacga gctggttggc
     2401 ccgcaggttg acgctgagcc aggcctgcac cgccgccacg cacagcgcgg ccaggatggc
     2461 gcaaccgacg ccgagatagg gatcgccggt ggcccacgag cccagcgcgc cgaagaaagc
     2521 ggccgtcagc atcatgcctt caaggctgag gttcagcacg cccgagcgct ccgagacgag
     2581 ttcgccgctc gccgccagca tcagcggcat ggcaaggcgc aaggtcgagg cgaggaagat
     2641 ggcgaaagtc tcttccatca gcgcgaccct ccttcgagct tgtcgaccag gatcaccgag
     2701 ccggcgacgg caatgacgat caggccctgg atgaccagcg tgagcgccgc cggcacgccg
     2761 gccatgattt ccatggagat gccgccggag cgcaggaagc caaagaacag cgcgcccgcc
     2821 agcacgccca cggtcgagcc gcgcgacagc aggccgacga ccaggccgtc gaagccgtag
     2881 cccgaggaga agccggcctt gaggtagtat tgctcgccct gcag
//
LOCUS       DASWGA010000527         5843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1826358, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000527 DASWGA010000000
VERSION     DASWGA010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5843
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1826358"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1632)
                     /locus_tag="VF991_12480"
     CDS             complement(<1..1632)
                     /locus_tag="VF991_12480"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9557308.1"
                     /translation="MSVAASEPPASQAAAVAPAHQEAFVRAELIRRLFEGSAQSRYFS
                     FVLWPVIAAIYWRQIDLIELVGPFTAHLAITFGFDVLRGNFNRARPSDEDVIRWGWIF
                     AGLSFLAGACWGWAGYLLASKDYELQRMLLGLVLLATITTAVPIRSAHPPTFYAFAAA
                     TTAPLLFVLLSSVDPFYQLVGIAGGAYVGHLMAYVRDVHRWQYDNIALAYEKEDLARQ
                     LQIAYDEARLARDTAIEAQREAENANQAKSTFLATVSHEIRTPMNGVLGMIDVLERSP
                     LSVEQREALGTVRYSASALLRIIDDILDFSKIEAGRLDLERIELSTVELIEGVGETLA
                     PQAAAKGLKLAAYVAAGVPRRVTGDPLRLQQILFNLLGNAIKFTETGSVRLSLETAGE
                     AMLCIKVADTGIGLSAELQGRLFRPFVQADSSTTRRFGGTGLGLSIVRRLAEAMGGNV
                     DVFSEPGKGSTFAVTVRLDEVVPAGRREMPLQGLSLSLALPDADEARAIARYLEDAGA
                     VVKRLDAAGPFTGIRVDGLDLDVCLADGPESGLPRP"
     gene            1838..2545
                     /locus_tag="VF991_12485"
     CDS             1838..2545
                     /locus_tag="VF991_12485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9557309.1"
                     /translation="MQQPSILLVEDDAFQRKAAEAYLVNHDLKVIAVENGAQMRRQIS
                     RSMPDLVLLDVQLPGQEDGFALARWLRESNTRVGIIMLTAAGDAVDKVLGLESGADDY
                     VAKPYEPRELLARCKSVLRRSANKTTPSLLERVRIGCYTLDLPKRQLFDQGGKDVALT
                     SGEFDILKTFAENPNRPLSRDWLLETTSHRSRDPFDRAIDLRITRIRRKIEPTPDKPT
                     VIRTVRGIGYMFVPPAE"
     gene            2589..2664
                     /locus_tag="VF991_12490"
     tRNA            2589..2664
                     /locus_tag="VF991_12490"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2622..2624,aa:Ile,seq:cat)
     gene            complement(2860..2988)
                     /locus_tag="VF991_12495"
     CDS             complement(2860..2988)
                     /locus_tag="VF991_12495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557310.1"
                     /translation="MNLDAIAIGYQPPEDVKLLGWGDVEEARRLIEEAIDRAKIGG"
     gene            complement(3146..4774)
                     /locus_tag="VF991_12500"
     CDS             complement(3146..4774)
                     /locus_tag="VF991_12500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557311.1"
                     /translation="MSREERKVIIASSVGTVFEWYDFYLAGSLAANISANFFSGVNPT
                     AGFIFTLLGFAAGFAVRPFGALFFGSLGDLIGRKYTFLVTMTLMGIATFVVGLLPGYA
                     AIGIAAPVLFIACRLIQGLALGGEYGGAATYVAEHAPQDRRGFYTSWIQTTATVGLFL
                     SLLVILALRLSLSPEQFAAWGWRVPFLLSILLLGVSIWIRLQLEESPAFARIKAQGKH
                     SKTPLREAFGRWKNAKIAVFALLGGTAGQAVVWYTGQFYALFFLTQTLKLDGTTSNLV
                     IAASLAIGTPFFIFFGWLSDKIGRKPIILAGCLLAAVTYFPLFSALTNAVNPQLERAL
                     ETSPVTVIADPNECSFQFNPTGTASFTTSCDIAKSFLARNAVNYHNEKAPPGTPEQIK
                     IGDKVIAAFDKKAAGAEGAAKEKDFNQQATAAIRAAGYPAAADKARINMPVVIGILTL
                     LVIYVTMVYGPIAAMLVELFPTRIRYSGMSLPYHIGNGWFGGFLPPTAFAIVAATGDI
                     YSGLWYPIVVAGMTFVIGLLFVPETKDRDIYKDD"
     gene            complement(5296..>5843)
                     /locus_tag="VF991_12505"
     CDS             complement(5296..>5843)
                     /locus_tag="VF991_12505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557312.1"
                     /translation="YFLQQVSKVDLFTSSYIVMAALLIATPTLIFWGWASDHIGRKPV
                     ILGGMLLAAVTYYPLYVWLGSVTQPGNINYPVAILIIAILVNYVGMVYGPVGAFLAEF
                     FPARIRYTSVSVPYHIGNGWGGGLVPFITSAAFAATGSLWDALLYPIAVPAVCFVLAL
                     FLMPETRHISIWEPHKAKAAS"
BASE COUNT         1143 a         1831 c         1947 g          922 t
ORIGIN      
        1 gggacgcggc agtcccgatt cgggcccatc ggccaggcag acgtcgaggt cgaggccgtc
       61 gacgcggata ccggtgaacg gcccggccgc atcgagccgc ttcaccaccg caccggcatc
      121 ctcgagatag cgggcgatcg cgcgggcctc gtcggcatcg ggcagggcga gggaaagcga
      181 cagaccctgc agcggcatct cccgccgccc cgccgggacg acctcgtcca accgcacggt
      241 gacggcaaaa gtcgaaccct tgcccggctc gctaaagacg tcgacgttgc cgcccatcgc
      301 ctcggccagc cggcgcacga tggacaggcc aaggccggtg ccgccgaagc gccgcgtggt
      361 cgaactgtcg gcctgcacga agggccggaa caggcggccc tgcagctcgg cactgaggcc
      421 gatgccggta tcggccacct tgatgcagag catcgcctcg cccgccgtct cgagcgacag
      481 gcgcaccgat cccgtctcgg tgaacttgat ggcattgccc agcaggttga acaggatctg
      541 ctgcaggcgc agcggatcgc cggtcacgcg ccgcggcacc ccggccgcga cataggcggc
      601 gagcttcagt cccttggcgg cagcctgcgg cgccagggtc tcgcccacgc cctcgatcag
      661 ctcgaccgtc gacagctcga tgcgctcgag gtcgagacgg ccggcctcga tcttggagaa
      721 gtcaaggatg tcgtcgatga tgcgcagcaa cgccgacgcc gaatagcgca cggtgcccag
      781 cgcctcgcgc tgctcgaccg acagcggcga acgttccagc acgtcgatca tgcctaaaac
      841 gccgttcatc ggcgtgcgga tctcgtggct caccgtggcc aggaaggtcg acttggcctg
      901 gttggcgttc tcggcctcgc gctgcgcctc gatcgccgtg tcgcgggcaa gccgcgcctc
      961 gtcgtaggcg atctggagct ggcgggcgag atcctccttc tcgtaggcga gcgcgatgtt
     1021 gtcgtactgc cagcgatgga catcgcgcac ataggccatg agatggccga cgtaagcgcc
     1081 gccggcgatg ccgaccagct ggtagaacgg atcgaccgag ctcagcagca cgaacagaag
     1141 cggcgcggtc gtggcggcag caaaagcata gaaggtcggc ggatgggccg agcggatcgg
     1201 caccgccgtg gtgatggtgg cgagcagcac gaggccgagc agcatgcgct gcaactcgta
     1261 gtccttggag gcgagcagat agcccgccca gccccagcag gcgccggcga ggaacgacag
     1321 gccggcgaat atccagcccc agcggatgac gtcctcgtcg gacggacggg cgcggttgaa
     1381 gttgccgcgc aggacgtcga agccgaaggt gatcgccaga tgcgcggtga acggcccgac
     1441 gagctcgatg aggtcgatct gccgccaata gatggcggcg atcaccggcc acaacacgaa
     1501 cgagaaatag cgcgactgcg ccgagccttc gaacaggcgc cggatgagct cggcgcggac
     1561 aaaggcctcc tggtgggccg gcgcgaccgc tgcggcctgg gaggcgggag gctcagaggc
     1621 ggcgaccgac atcgtcctca agatctgccc ttggcggggc gggaactagg gctagagacg
     1681 gaaatggatc gcgtatcaaa tgcttgagat gtcatatgtt caggctgtgc ccggatgcgc
     1741 cgacaatcgt accaaatata tcaagaagtc actatatctc attgagaaac agtgctattt
     1801 tgtctgaatt agagaaacat ttattttgga tcaagtcatg cagcaaccat ccattctgct
     1861 cgtcgaggac gatgcgttcc agcgcaaagc ggccgaggcc tacctggtga atcacgacct
     1921 caaggtcatc gccgtggaaa acggcgccca gatgcgtcgg cagatctcgc ggtcgatgcc
     1981 cgacctcgtg ctgctcgacg tgcagttgcc cggccaggaa gacggcttcg cgctcgcccg
     2041 ctggctgcgc gaaagcaaca ccagggtcgg catcatcatg ctgacagcgg cgggcgatgc
     2101 ggtggacaag gtgctgggcc tggaaagcgg cgccgacgac tatgtcgcca agccctacga
     2161 accgcgcgag cttctggcgc gctgcaagag cgtgctgcgc cgctcggcca acaagacgac
     2221 gccatccctg ctcgagcgcg tgcgcatagg ctgctatacg ctcgacctgc ccaagcggca
     2281 gcttttcgac cagggcggca aggacgtcgc gttgacctcg ggcgagttcg acatcctgaa
     2341 aaccttcgcc gagaacccca accggccgct gtcgcgcgac tggctgctgg agaccaccag
     2401 ccaccgcagc cgcgacccgt tcgaccgcgc gattgacctc cgcatcaccc gcatccggcg
     2461 caagatagaa cccacgccgg acaagccgac cgtcattcgc accgtgcgcg gcatcggcta
     2521 tatgttcgtg ccgcccgccg aatagggtag aagggcggcc cctcccgggg ccacaagcgg
     2581 gtcggtgggg gcccgtagtt cagtggttag aacgagccgc tcataacggt tatgtcgcag
     2641 gttcgaatcc tgccgggcct accaactctc gtcccggatg ttctgagacg tcccgtatca
     2701 tcccgggtgg tgacgccgac atggccgcgg caaagcaatt gctgcccact gttgtccagc
     2761 aaatagcgcg gtacggcgtc caatgacgtt gtctccatgc ttcgagacgg ccgttgcgcg
     2821 gcctccccag catgaagtct tgtcggccgt tggagcgaac tagcccccga tcttggcgcg
     2881 atcgatcgcc tcctcgatga ggcggcgcgc ctcttccacg tcgccccagc ccagcagctt
     2941 cacgtcctcg ggcggttgat agccgatcgc gatggcgtcg agattcatgg cgtgaccctg
     3001 cggtgatgct atcccgaggc cgaaggccga gggacctttc ctgtaacgca aagatccctc
     3061 gcttatgcgc gggatgacga tgggaggcaa aaagaaaacc ggcggcactt gcgtgccgcc
     3121 ggttcctttc ggacgatcgt ccccgtcagt cgtccttgta gatgtcgcgg tccttggtct
     3181 ccggcacgaa cagcaggccg atgacgaatg tcatccccgc caccacgatc ggataccaca
     3241 gacccgagta gatatcgccg gtcgccgcca cgatggcgaa ggcagtgggc ggcaggaagc
     3301 cgccgaacca tccattgccg atatggtagg gcagcgacat gccagagtag cggatgcggg
     3361 tcgggaagag ctcgaccagc atggcggcga tcgggccata gaccatcgtc acgtagatga
     3421 cgaggagggt caggatgccg atcaccactg gcatgttgat gcgggccttg tcggccgcgg
     3481 ccggatagcc ggcggcgcgg atggccgccg tcgcctgctg gttgaagtcc ttctccttgg
     3541 ctgcgccctc ggctccggcc gccttcttgt cgaaagcggc gatcaccttg tcgccgatct
     3601 tgatctgttc cggggtcccc ggaggcgcct tttcgttgtg gtagttcacc gcgttgcgcg
     3661 ccaggaacga cttggcgatg tcacaggacg tggtgaagct tgccgtgccc gtcgggttga
     3721 actggaacga gcactcgttg gggtcggcga tcaccgtcac cggcgaggtc tccagcgccc
     3781 gctcgagctg tgggttgacc gcgttggtca gggcgctgaa cagggggaag taggtgacgg
     3841 cggcgagcag gcaaccggcg aggatgatcg gcttgcggcc gatcttgtcc gaaagccaac
     3901 cgaagaagat gaagaacggc gtgccgatag caagcgacgc cgcgatcacc aggttcgacg
     3961 tcgtgccgtc gagcttcagc gtctgggtga ggaagaacag ggcgtagaac tggcccgtgt
     4021 accacaccac ggcctggccg gcggtgccgc cgagcagggc gaagaccgcg atcttggcgt
     4081 tcttccacct gccgaaggcc tcgcgcaacg gcgtcttgga gtgcttgccc tgcgctttga
     4141 tgcgcgcgaa ggccggcgac tcctcgagct gcaggcgaat ccagatcgac acgcccagca
     4201 gcaggatcga cagcaggaac ggcacccgcc agccccaggc ggcgaactgc tcgggcgaga
     4261 gcgacaggcg gagggccagg atgacgagca gcgacaggaa caggccgacg gtcgccgtgg
     4321 tctggatcca cgaggtgtag aagccgcggc gatcctgcgg tgcgtgctcg gcaacgtagg
     4381 tcgcggcacc gccatactcg ccgcccaggg ccaggccctg gatgaggcga caggcgatga
     4441 acagcaccgg cgcggcgatg ccgatcgcgg cataacccgg cagcaggccg accacgaatg
     4501 tcgcgatgcc catcaaggtc atggtgacca ggaaggtgta tttgcggccg atcaggtcgc
     4561 ccaggctgcc gaagaacagc gcgccgaacg gacggaccgc gaagccggcg gcgaaaccca
     4621 gcagggtgaa gatgaagccg gccgtcggat tgacgccgga gaagaagttg gcgctgatgt
     4681 tcgcggcaag cgaacccgcg aggtagaagt cgtaccattc gaagacggtg ccgacggaag
     4741 aagcgatgat gacctttcgc tcttcccgcg acatcggcct gcgaagttcg gctccggccg
     4801 ctaatgttgc catggtcata tgcattcact cccctagctg acgacataat tcgcgaagct
     4861 atttgagaag cgtttagtgc gtcgctcggg tgaagcgcaa ttcgaccaag gtcgttcgac
     4921 taaagtgcgg gatcgaggcg cggatctgca gcgagaaaaa gaaccggcgg cgcttatgac
     4981 gccgccggta tcgcgacgcg agcgcgttac gatcaccagc gtcatcaggg agacgatgat
     5041 cggataccgc cattaatgcg cttcaacgca ttgaaacttg gcgcggcgcc ctgaccggaa
     5101 gtcaggtagg ccggcacgtc gggggcggcg ccatgatgcg ttgtgaaatc agggctcaga
     5161 tagctgtacc caacacggcc ctgtgctgga atcgaaccag ctggctctct gaccgccgcc
     5221 gaccacgcca ttcgacttgt gcacggaagg cggacccggt acggggccga cgcgggcccc
     5281 gtaccgatgc gcctgctaag aagcggcttt tgccttgtgc ggttcccaga tgctgatgtg
     5341 ccgcgtttcc ggcatcagga aaagggcaag gacgaagcac accgcgggaa cggcgatcgg
     5401 atagagcagt gcgtcccaga ggctgccggt cgccgcgaac gccgccgacg tgatgaacgg
     5461 caccaggccg ccgccccagc cgttgccgat atgatagggt accgacaccg aggtgtagcg
     5521 gatgcgggcc gggaagaact ccgccaggaa cgcgccgacc ggcccgtaga ccatgccgac
     5581 atagtttacg aggatggcga tgatcaggat cgcgaccgga tagttgatgt tgcccggctg
     5641 cgtcacgctt ccgagccaaa cgtagagcgg atagtaggtg accgccgcca agagcatgcc
     5701 gccgaggatc accggcttgc ggccaatgtg gtcggacgcc cagccccaaa aaatcaaggt
     5761 cggtgtcgcg atcagcagcg cggccatcac gatgtagctc gaggtgaaca agtccacctt
     5821 cgagacctgc tgcaggaagt aca
//
LOCUS       DASWGA010000528         5644 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_435869, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000528 DASWGA010000000
VERSION     DASWGA010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5644
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435869"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..109)
                     /locus_tag="VF991_12510"
     CDS             complement(<1..109)
                     /locus_tag="VF991_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557313.1"
                     /translation="MLATEDLTIRFGGHAAVDGVSCAFQPGTLTSIVGPN"
     gene            complement(206..1396)
                     /locus_tag="VF991_12515"
     CDS             complement(206..1396)
                     /locus_tag="VF991_12515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX9557314.1"
                     /translation="MFRRSFVVLAGLALAVPAAAQQPPLKIALIYGKTGPLEAYARQT
                     EAGFMLGLEYATKGSMEVDGRKIQVILKDDQLKPDLAKAALEQAYGDDKVDIAVGTSS
                     SAAALAMLPVAEEYKKLLIVEPAVADQITGDKWNRYVFRTSRNSTQDALAGAATLKDE
                     NISIATLAQDYAFGKDGVASLKDALAAVGSKAKIVHEEYAPQATTDFTAPAQRIFDAL
                     KDKPGRKIVVVVWAGAHPLPKLMDLKPERYKIEIAPGGNILPVMAGWKQFPGLEGAIY
                     YYWGFPKNPVNDWLVTEYKKKNNGAPPDFFVAGGMAAALAIVEAVKKAKSTDTEKLIA
                     AMEGMSFETPKGTMTFRKEDHQALQVMYHWRMKQNPPDNTDLLELVREIPADELKLPI
                     KNKR"
     gene            complement(1426..2682)
                     /locus_tag="VF991_12520"
     CDS             complement(1426..2682)
                     /locus_tag="VF991_12520"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9557315.1"
                     /translation="MNGLRLALSALALLSVATAAHAENGTLPMASKPEDVGLSSTQLK
                     RLEEVTQKHIDEGLVPGAVMVVARRGKIAWVSTLGKRDVAAGDAMKFDSIFRVYSMTK
                     PIVSVAAMQMVEEGKLQVSDPVSKFLPEIGKMKVGVEKIGADGRPLLQLTDPERPMTV
                     QDLLRHTSGLTYGSRGTTLVNQAYVAAKIGDRSMSNEEFVAKLSTLSLKFSPGARWEY
                     GVSTDVLGRLVEVVDGKKLGEALGARVFQPLGMVDSGFQVAADKLSRAAQPGPRPGGQ
                     PMTPRFAVNDGAKYESGGGGLTSTMEDYLRFTAMLANGGALSGKRLLGKQTMAFMTAD
                     HTGNRPGRPPGLGFGLGFEVRTTTGEAALPGSVGEYGWAGNAGTLFWIDPKEQLIAIY
                     MVQVSDPDRIALRNQFRTMVQSAIID"
     gene            complement(2679..3596)
                     /locus_tag="VF991_12525"
     CDS             complement(2679..3596)
                     /locus_tag="VF991_12525"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX9557316.1"
                     /translation="MDTNWDDLRVFLTLAREGTLTTAAKALGVSHPTVARRVRALEKQ
                     IGARLFERLPDRFAPTSAGEKLIADTEAMERAALSIGRRSAGLSDTVSGVVRLSAGEA
                     MAALIARHLPGLRERLRQIEFEVIASHTLANLSRREADLLIREQVPELGGIVARKLGR
                     VAYAVYAARDFAVGRAMPASLADVSWIGFDDDHSYMPGQHWLQERLGGARPAVRCNNW
                     LVLHEAVRAGAGLAVLPCYLGDPDPTLKRVGGIIAEIFADQWLLVHRDLRALPRVRAV
                     MDAVVDLFHRERALLEGRIVGKTEREERT"
     gene            3669..>5644
                     /locus_tag="VF991_12530"
     CDS             3669..>5644
                     /locus_tag="VF991_12530"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557317.1"
                     /translation="MHIEPRLLVFTKGVRGRIAGAVAIGLLAIGLGIARLGLLGWLIG
                     QVFEGRTLADLVLPVLLVALVMVLRGWAEHWRAVVAHETAARVQKMLRRTLYDRIAAL
                     GPGTVGRQRSGALTLSMIDGVEQLETYFGQFLPQFLIALLSPLLIFAVVAFVDLPVAL
                     VMLGFALIALFAPGLWHKFDIRNSMYRQRSYASFAAEFLDSIQGLATLKAFGQGKARA
                     DKLEIEARELFRRTMWVLGTNALARGITDTAIACGAAGALIYGASRVEAGAMSLSALL
                     VILMLGIEIFRPMRELRTVLHQGMVGLSAAQGIYRILDDQPTVADAPAARLGDRLHGA
                     LAPTIAFEDVRFSYPGTRRTVHDGLSFRAEAGERLGLVGPSGGGKSSIVRLLLRFYDP
                     DRGRILLGGHDLRSLPFAEIRSLISVVNQDTFLFHGTVEENIRLGRPEASYEELVEAA
                     RAANIHDFILTLPQGYETTIGEKGIKLSGGQRQRVAIARALLRDTPILVLDEALSAVD
                     AENEAVIQEALDRLMQGRTTLILAHRLSSVIDCDRIVVLDGGRVAEQGRHEALMARGG
                     VYAGLMAEQAREQHSAGTSDTIATPARAESVADTPGGAVKPLTEGIIKAEGLTWYQVV
                     ANLMKVILPWKGKLAATFSFGVLRVISFIGVGVLS"
BASE COUNT          839 a         1917 c         1872 g         1016 t
ORIGIN      
        1 cgttcggccc gacgatggag gtgagcgtgc ccggttgaaa ggcacagctc accccgtcca
       61 cggcggcatg tccgccgaag cggatcgtca ggtcttcggt ggcgagcatc tatttgtcat
      121 cccgaggccg caggccgagg gatctttgct gtggccttaa aggtccctcg ctgcgctcga
      181 tgacaacctc gtcgcaatag atgcgtcacc gcttgttctt gatcggcagc ttgagctcgt
      241 ccgccggtat ctcgcgcacc agctcgagca ggtctgtatt gtccggcggg ttctgcttca
      301 tgcgccagtg atacatcacc tgcagcgcct gatggtcctc cttgcggaag gtcatggtgc
      361 ccttgggcgt ctcgaagctc atgccttcca tggcggcgat cagcttctcg gtgtcggtgc
      421 tcttggcctt cttcaccgcc tcgacgatgg ctagtgctgc ggccatgccg ccggccacga
      481 agaagtccgg cggcgcgccg ttgttcttct tcttgtattc ggtcaccagc cagtcgttca
      541 ccgggttctt ggggaagccc cagtagtagt agatcgcgcc ttcgaggccg gggaactgct
      601 tccagccggc catcaccggc aggatgttgc cgccgggcgc gatctcgatc ttgtagcgct
      661 ccggcttgag gtccatcagc ttgggcagcg gatgggcgcc tgcccacacg acgaccacga
      721 tcttgcggcc gggcttgtcc ttcagcgcgt cgaagatgcg ctgggccggc gcggtgaagt
      781 cggtggtggc ctgcggcgcg tattcctcgt gcacgatctt ggccttggag ccgacggcgg
      841 ccagcgcgtc cttgagcgag gccacgccgt ccttgccgaa ggcatagtcc tgggcgagcg
      901 tcgcgatgct gatgttctcg tccttcaagg tcgccgcgcc ggccagcgca tcctgggtcg
      961 agttgcgtga agtgcggaag acgtagcggt tccacttgtc gccggtgatc tggtcggcca
     1021 cggccggctc gacgatcagg agcttcttgt actcctcggc gaccggcagc atggcgagcg
     1081 ccgcggccga cgaggaggtg ccgacggcga tgtcgacctt gtcgtcgcca taggcctgct
     1141 cgagggcggc cttggcgagg tcgggtttca gctggtcgtc cttcaggatg acctggatct
     1201 tgcggccgtc gacctccatc gagcccttgg tcgcgtattc gagaccgagc atgaagccgg
     1261 cctcggtctg gcgcgcatag gcctccagcg gcccggtctt gccgtagatc agggcgatct
     1321 tgagcggcgg ctgctgggca gcggccggca ccgccagcgc caggccggcc aggacaacga
     1381 acgaacgacg gaacatgaaa gcgtcctcct ctgttggacg ctcttctagt cgatgattgc
     1441 cgactgcacc atggtccgga actggttgcg caaggcgatg cggtcgggat cgctcacctg
     1501 caccatgtaa attgcgatca gctgctcctt gggatcgatc cagaacagcg tgccggcatt
     1561 tccggcccag ccgtactcgc caaccgaacc cggcagcgct gcctcgcccg tggtggtgcg
     1621 cacctcgaag cccagcccga agcccaggcc gggtggtcgg cccggccggt tgccggtgtg
     1681 gtcggcggtc atgaaggcca tcgtctgctt gccgagaagg cgtttgccgg agagtgcgcc
     1741 gccgttggcg agcatcgcgg tgaagcggag ataatcctcc atcgtcgagg tcagtccgcc
     1801 gccgcccgat tcgtatttgg cgccgtcgtt caccgcgaag cgcggcgtca tcggctggcc
     1861 acccggccgc ggccccggct gggcggcgcg cgacagcttg tcggccgcta cctggaaacc
     1921 cgaatcgacc atgccgagcg gctggaagac gcgcgcgccc agcgcttcgc ccagcttctt
     1981 gccgtcgacc acctcgacga ggcgacccag cacgtcggtc gacacgccgt attcccagcg
     2041 cgcgccgggc gagaatttga gcgaaagcgt tgacagcttg gcgacgaatt cctcgttgct
     2101 catcgagcga tcgccgatct tggcggcaac gtaggcctgg ttgaccagcg tcgtgccgcg
     2161 cgagccatag gtcaggcccg acgtgtggcg cagcaggtcc tgcaccgtca tgggtcgctc
     2221 ggggtcggtg agctgcagca gcggccttcc gtcggcaccg atcttctcga cgccgacctt
     2281 catcttgccg atctcgggca ggaacttcga caccgggtcg ctcacctgca gcttgccctc
     2341 ctcgaccatt tgcatcgccg ccacgctcac gatcggcttg gtcatggaat agacgcggaa
     2401 tatcgaatcg aacttcatcg catcgcctgc cgccacatca cgtttgccga gcgtcgatac
     2461 ccaggcgatc ttgccgcgcc gcgccaccac catcaccgcg ccgggcacca gcccctcatc
     2521 gatgtgcttc tgggtgactt cttcgagacg cttgagctgc gtcgaggaga gacccacgtc
     2581 ctcgggcttc gacgccatcg gcagggtgcc gttctcggca tgcgccgccg tggcgaccga
     2641 caacaaggca agcgcggaca acgccaggcg aagaccgttc atgttcgttc ctcccgctcg
     2701 gttttcccga ctatacgccc ttccaggagc gcacgctcgc ggtggaagag gtcgaccacg
     2761 gcgtccatga ctgcacgtac gcggggcaag gctctgagat cgcgatgcac cagcagccat
     2821 tggtcggcga agatctcggc gatgatgccg cccacgcgct tgagcgtcgg atcgggatcg
     2881 ccgagatagc agggcagcac ggcaagcccg gcgccggcgc gcaccgcctc gtgcagcacc
     2941 agccagttgt tgcaacgcac ggcaggtcgc gcgccaccca gtctctcctg cagccagtgc
     3001 tggcccggca tgtagctgtg gtcgtcgtcg aagccgatcc acgacacgtc tgccaacgac
     3061 gccggcatgg cgcggccgac cgcgaagtcg cgcgcggcat agaccgcgta ggccacccgt
     3121 cccagcttgc gcgccacgat gccgcccagt tcaggcacct gctcgcggat caagaggtcg
     3181 gcctcgcggc gcgacaggtt ggcgagcgtg tggcttgcga tcacctcgaa ctcgatctgg
     3241 cgcagccgct cgcgcagtcc cggcaggtgg cgcgcgatca gggcggccat tgcctcgccg
     3301 gccgacagcc gcacgacgcc gctcacggtg tcgctcaagc ccgcactgcg gcggccgatc
     3361 gacagggccg cgcgctccat cgcctcggta tcggcgatca gcttctcgcc cgccgaggtc
     3421 ggcgcgaagc ggtcgggcag gcgctcgaac aggcgcgcgc cgatctgctt ctcgagcgcc
     3481 cgcacgcggc gcgccaccgt gggatggctg acgcccagcg ccttggcggc ggtcgtgagc
     3541 gtgccttcgc gggcgagcgt caggaacacg cggaggtcgt cccagttggt atccatgtac
     3601 aaatttgtac aatgcttttt ccaaattgtg gactgacgaa tacatacgtt cggcctagca
     3661 ttgccgtcat gcacatcgaa ccgcgtcttc tcgtcttcac caaaggggtg cgcggacgca
     3721 tcgccggcgc cgtcgccatc ggccttttgg cgatcggcct cggcatcgcc cgcctcggcc
     3781 ttttgggctg gctgatcggc caggtcttcg aagggcgcac gcttgccgac ctcgtgttgc
     3841 ccgtgctgct ggtcgccctg gtgatggtgc tgcgcggctg ggccgagcat tggcgcgccg
     3901 tggtggcgca cgagacggca gcgcgcgtcc agaaaatgct ccgtcgcacg ctctacgacc
     3961 gcatcgccgc cttggggccc ggcacggtcg gccgccagcg ctcgggcgcg ctcacgcttt
     4021 cgatgatcga tggcgtcgag cagctcgaaa cctatttcgg ccagttcctg ccgcagttcc
     4081 tgatcgcgct gctctcgccg ctgctgatct tcgccgtcgt ggccttcgtc gacctgccgg
     4141 tcgcgctggt gatgctgggc ttcgcgctga tcgcgctgtt cgcgcccggc ctgtggcaca
     4201 agttcgacat caggaactcg atgtatcggc agaggtccta tgcctcgttc gccgccgagt
     4261 tcctcgattc gatccagggg ctggcgacct tgaaggcgtt cggccagggc aaggcgcgcg
     4321 ccgacaagct cgaaatcgag gcgcgcgagc tcttccgccg caccatgtgg gtgctgggca
     4381 ccaacgcgct ggcgcgcggc atcaccgaca ccgccatcgc ctgcggcgcg gcgggtgcgc
     4441 tgatctatgg cgcctcgcgg gtcgaggcgg gcgccatgtc gctatcggcc ctgctggtga
     4501 tcctgatgct gggcatagaa atcttccggc cgatgcgcga gctccgcacg gtgctgcacc
     4561 agggcatggt cgggctctcc gccgcgcagg gcatctaccg catcctcgac gaccagccca
     4621 ccgtcgccga cgctcctgcg gcgcggctcg gagatcgcct ccatggggcc ctggcaccga
     4681 ccatcgcctt cgaggatgtg cgcttctcct atcccggcac gcgccgcacc gtgcatgacg
     4741 gcctgtcctt ccgcgccgag gccggcgagc ggctggggct ggtcgggccg tcgggtggcg
     4801 gcaagtcgtc gatcgtgcgc ctgctgctgc gcttctacga tcccgaccgc ggccgcatcc
     4861 tgttgggcgg ccacgatctg cgctccctgc cgttcgccga gatccgctcg ctgatctcgg
     4921 tggtgaacca ggacaccttc ctgttccacg gcacggtcga ggagaacatc aggctgggcc
     4981 ggcccgaggc gtcgtacgag gagctggtcg aggccgcacg cgccgccaac atccacgatt
     5041 tcatcctgac cctgccgcag ggttacgaga cgacgatcgg cgagaagggc atcaagctct
     5101 cgggcggcca gcgtcagagg gtggcgatcg cccgggcgct cctgcgcgac acgccgatcc
     5161 tggtgctcga cgaggcgctg agcgccgtcg atgccgagaa cgaggcggtg atccaggagg
     5221 cgctcgatcg gttgatgcaa ggccgcacga cgctgatcct cgcccatcgc ctgtcgagcg
     5281 tgatcgattg cgaccgcatt gtcgtcctcg acggcgggcg ggtcgccgaa cagggccggc
     5341 acgaggcgct gatggcacgg ggcggcgtct atgccgggct gatggccgag caggcgcgcg
     5401 aacagcactc cgccggaacc tcggacacca tcgccacgcc ggcgcgcgcc gagagcgtgg
     5461 ccgacacgcc gggcggcgcg gtgaagcccc tcaccgaagg catcatcaag gccgaaggac
     5521 tcacctggta ccaggtcgtg gccaacctga tgaaggtcat cctgccgtgg aagggcaagc
     5581 tcgccgccac cttctcgttc ggcgtgctgc gcgtgatctc cttcatcggc gtgggcgtgc
     5641 tgtc
//
LOCUS       DASWGA010000529         2642 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1448696, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000529 DASWGA010000000
VERSION     DASWGA010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1448696"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..667)
                     /locus_tag="VF991_12535"
     CDS             complement(<1..667)
                     /locus_tag="VF991_12535"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557318.1"
                     /translation="MHRAVVPVATMLAIQVMISLSVLSLSVMMPVVAADLLIDPKLVG
                     VFTAIIYGVAAVTALAAAEPIVRLGAVRICQAALLMAAIGLAVNALAAVAATVIAVIF
                     IGAAQGPINPASAHVLAQRVPREWFGTVFSLKQTGVPIGFALAGLIFPFLLELVGWRG
                     ASLVAAAAAVLAALMVELLRSSLDAVVTAGKSSVGIWRSVRFVFAHRELRVLGLSAIV
                     YVIA"
     gene            complement(817..1731)
                     /locus_tag="VF991_12540"
     CDS             complement(817..1731)
                     /locus_tag="VF991_12540"
                     /inference="COORDINATES: protein motif:HMM:NF026954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX9557319.1"
                     /translation="MTDRPRRPRRVQLSTPGSSEKMIQKASESKADHVFLDLEDAVAP
                     SQKREARKKIVEGLKSLNWGKKTRCVRINDLTTEYAFEDIIEVVEGAGEHLDTIMLTK
                     VLTPADVLFADKLLHQLEKKLKLKRRIGLEALIEEVEGMQNVDAIAACTPRLECLVFG
                     MGDFSASMGVTNKNVGESDGYPGDIWHYARFRLVMACRAAGIDPVDGPFADFRNPNAY
                     REECRRSMILGCVGKWAIHPSQIDIALEVYSPKPEDVARARKLEKAYAEAEAKGLGAI
                     NVDGVMVDVASIRILRNTVLNKAELYGM"
     gene            complement(1743..>2642)
                     /locus_tag="VF991_12545"
     CDS             complement(1743..>2642)
                     /locus_tag="VF991_12545"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9557320.1"
                     /translation="MDRLGLGYETLHERFPKLVYATIRGFGDWRTGRSPYTDWPAYDV
                     VAQAFGGVMAITGPDRDTPMKVGPGIGDLMPATMCAVGIVSAILRAHKTGQGQFVDVG
                     MVDAILSMCERIVHQHSYTGGVPVPEGNHHPLLCPFGMFPAKDGFVTIAAHADTHWPV
                     LCRLIGQAGMGVDPRFATVQDRHAHQAEIVGAVSSFTSQRTKQELLAHLGGQVPFAPV
                     NDVRDVFANPHFAARDMVVSVPHPGLDHETKVAGVAIKMSETPGRVRHRAPLLGEHTD
                     EYLTSLGLGLEEIAHLRAEKIVA"
BASE COUNT          455 a          837 c          921 g          429 t
ORIGIN      
        1 gggcgatgac atagacgatc gccgacaggc cgaggacgcg cagctcgcga tgggcgaaga
       61 cgaagcggac cgaccgccag atgccgaccg acgacttgcc tgccgtgacc acggcatcga
      121 ggctggagcg cagcagctcg accatgaggg cggccagcac ggcggcggcc gcggcgacca
      181 ggctggcgcc acgccagccc acgagttcga gcagaaaggg aaagatcagg ccggccaggg
      241 cgaagccgat gggcacgccg gtctgcttca gcgaaaacac cgtgccgaac cattcgcgcg
      301 gcacgcgctg cgccaggaca tgcgccgagg cgggattgat cgggccctgc gccgcgccga
      361 tgaagatcac ggcgatcacc gtcgccgcga ccgccgccag cgcgttgacc gcgaggccga
      421 tcgccgccat cagcagcgcc gcctggcaga tgcgcacggc gcccagccgc acgatcggct
      481 cggcggcggc cagcgccgtg acggcggcga cgccgtagat gatggcagtg aagacgccga
      541 ccagcttggg atcgattaaa aggtcggcgg cgacgaccgg catcatgacg ctgagcgaca
      601 gcacggaaag cgagatcatc acctggatgg ccagcatggt ggccaccggg acgaccgcgc
      661 gatgcatcga cctattgctc gactaaaacg acctcatgct gaggagcatc gctgggcgat
      721 gcgtctcgaa gcatgggccg cagacacgct gcctgtcgcc cacccttcga gacggccctg
      781 cgggcctcct cagggtgagg tgctctttgc atcgaattac atcccgtaga gctcggcctt
      841 gttcagcacc gtgttgcgca ggatgcggat cgaggcgacg tcgaccatga cgccgtcgac
      901 attgatggcg cccagcccct tggcttcggc ttcggcatag gccttctcga gttttctagc
      961 gcgcgcgacg tcctcgggct tgggcgagta gacctcgagg gcgatatcga tctgcgaggg
     1021 atggatggcc catttgccga cgcagcccag gatcatcgag cgccggcatt cctcgcggta
     1081 ggcgttcggg ttgcggaagt cggcgaacgg cccgtcgacc gggtcgatgc cggcggcgcg
     1141 gcaggccatg accaggcgga agcgggcata gtgccagatg tcgccgggat agccgtccga
     1201 ttcgccgaca ttcttgttgg tgacgcccat cgaggccgag aaatcgccca tgccgaacac
     1261 caggcattcc agccggggcg tgcaggcggc gatggcgtcg acgttctgca tgccctcgac
     1321 ttcttcaatg agagcttcga gtccgatgcg gcgtttcagc ttcagcttct tttcgagctg
     1381 atgcagcagc ttgtcggcga acagaacgtc ggccggcgtc agcaccttgg tcagcatgat
     1441 ggtgtcgaga tgttcgccgg cgccctcgac cacctcgatg atgtcctcga aggcatactc
     1501 ggtggtgagg tcgttgatgc gcacacagcg ggtcttcttg ccccaattga gcgacttcag
     1561 cccctcgacg atcttcttgc gcgcctcgcg tttctggctg ggggcgacgg cgtcctcgag
     1621 gtcgaggaag acatggtcgg ccttcgactc cgatgccttc tggatcatct tctcgctcga
     1681 tcccggcgtg gaaagctgca cgcggcgggg gcggcgcgga cggtcggtca tgtcatgtct
     1741 cctcaggcaa cgatcttctc ggcgcggagg tgggcgattt cctcaagccc caagccgagc
     1801 gaagtcagat actcgtcggt atgctcgccc agcaaggggg cgcgatggcg cacgcggccg
     1861 ggcgtttcgc tcatctttat ggcgacgccc gccaccttgg tctcgtggtc gaggccggga
     1921 tggggcaccg acaccaccat gtcgcgggcg gcgaagtggg gattggcgaa gacgtcgcgc
     1981 acgtcgttga ccggcgcgaa cggcacctgg ccgccgagat gagccagcaa ctcctgcttg
     2041 gtgcgctggc tcgtgaagga agagaccgcg ccaacgatct ccgcctggtg ggcatgacga
     2101 tcctgcaccg tggcgaagcg cggatcgacg cccatcccgg cttggccgat cagccggcag
     2161 aggaccggcc agtgcgtgtc ggcgtgggcg gcgatggtca caaagccgtc cttggccggg
     2221 aacatgccga acgggcagag caggggatgg tggttgcctt ccggcaccgg cacgccgccg
     2281 gtgtaggaat gctggtgcac gatgcgctcg cacatcgaca ggatggcgtc gaccatgccg
     2341 acatcgacga actggccctg gccggtcttg tgggcgcgca ggatggcgct gacgatgccg
     2401 acggcgcaca tggtggcggg catcaggtcg ccgatgccgg ggccgacctt catcggcgtg
     2461 tcccggtcgg ggccggtgat cgccatgacg ccgccgaacg cctgggccac gacgtcgtag
     2521 gccggccagt cggtgtaggg gcttctaccg gtacgccagt cgccgaagcc gcggatggtg
     2581 gcgtagacca gcttcgggaa tcgctcatgc agggtctcgt agcccaggcc gaggcgatcc
     2641 at
//
LOCUS       DASWGA010000530         5569 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_574424, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000530 DASWGA010000000
VERSION     DASWGA010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5569
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_574424"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..950
                     /locus_tag="VF991_12550"
     CDS             <1..950
                     /locus_tag="VF991_12550"
                     /inference="COORDINATES: protein motif:HMM:NF020694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1932 domain-containing protein"
                     /protein_id="HEX9557321.1"
                     /translation="MSLSPRVIALLGFGEAGSAIARGLCADGGWRGAARSTPAGPGDN
                     APRRLIAIDTALDQDARGTALGRQARALDVAIEGRYTAALSEADLVICAVQGEHALEA
                     AQAAAPLLKKGAHYLDLCTVTGAMSDEDRTAIEGAAGRYIDIAVMGGFFKSGIKAPML
                     VAGVDVEPVVAWMNTNGFDAKALGPKPGSASSVKMLRSVLMKGVEALAVESLVTAQRQ
                     GILDEVLACFSDADQLPFRDFIATLVQTHVVHAHRRWEEMGLVAKTLRETGVDPLMTE
                     TTEKSLRRTVDAGIAPADGKVPSLADALKILSEKVVRGR"
     gene            940..1428
                     /locus_tag="VF991_12555"
     CDS             940..1428
                     /locus_tag="VF991_12555"
                     /inference="COORDINATES: protein motif:HMM:NF015999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HEX9557322.1"
                     /translation="MAGDVFDRLVTLLGDAKAKFRVIEHAAEGRSEAISVIRGNRPDQ
                     AAKAMVLDLRGGGGGRRHVLAILPGSRKLDFNAVATLFEARKCGFASPDTAQELTGCV
                     MGSVPPFTLNPALAIVADEGLLANDTLFFNAGRLDRSMELDTKDWLAIAQPRVARIAA
                     KA"
     gene            1388..2293
                     /gene="lepB"
                     /locus_tag="VF991_12560"
     CDS             1388..2293
                     /gene="lepB"
                     /locus_tag="VF991_12560"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003608975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX9557323.1"
                     /translation="MPNRASPGSRPRPSARSDWLFQAYSLGRAACWTILHHGQPASGT
                     SAMANRSSPLRPRLIGWSRQLKSILLALGFVLIVRTVVAEPYEVPSPSMVPTLLVGDE
                     LIASKFAYGYSKYSSPIGLMPDFSGRLFGKRPERGDVIVFRLPRDPSTTYVKRLIGLP
                     GDRIQMHSGRLYINGAIVPRRAIGRFADDAGGGSVPSTLYVETLPNGREHEIVEISDA
                     EQHDDTPPFLVPSKHYFMMGDNRDNSLDSRIAVADGGVGFVPEDNLVARADLILLSRD
                     PAIAWFDVAEWPHAFRLARLLGRIN"
     gene            2311..2769
                     /locus_tag="VF991_12565"
     CDS             2311..2769
                     /locus_tag="VF991_12565"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9557324.1"
                     /translation="MADIWRFGPVGEADFEPLLALRIDVMREHLERVFRYKPSRARRI
                     FREHFDEPGLRLILVDGKRAGCVGFRVGNDEIKIDSFYLDRRHHNRGLGTTILKVLLA
                     EADARGLPVRLEVLRGSPADRFYERHGFVKLDEDDVEARYERVVPNPASA"
     gene            complement(2750..3313)
                     /gene="metW"
                     /locus_tag="VF991_12570"
     CDS             complement(2750..3313)
                     /gene="metW"
                     /locus_tag="VF991_12570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003608518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEX9557325.1"
                     /translation="MVDPATRALDVGCGDGSLLAYLVNFKRVDARGMELSQAGVNACV
                     ANGLSVIQGDADADLRDYPDDAFDYVILSQTLQATREPREVLRQMLRVGKRAIVSFPN
                     FAHWQVRLRLVFGGRMPETPSLPFKWYDTPNIHLCSIDDFRALCADMGVRVERAIVLD
                     RTSKPISLPPLLANLLGEQAVFMLRRD"
     gene            complement(3352..4542)
                     /locus_tag="VF991_12575"
     CDS             complement(3352..4542)
                     /locus_tag="VF991_12575"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEX9557326.1"
                     /translation="MDGSSAMELDDLTEPERKALARCRHAVLGIERPLRLDCGVDLGP
                     YRVAYQTYGTLNPDKSNAVLVCHALTGDQFAAEQHPVTGKEGWWESMVGPGKVLDPAH
                     YFIICVNVLGGCMGTTGPLACEPASGQPWNLRFPVVTVGDMVRAQAALLDHLGIPDLF
                     CVIGGSMGGMQVLEWAASHPARVFSAVPIACAARHSAQNIAFHEVGRQAIMADPEWKG
                     GDYRLHQTAPARGLAVARMTAHITYLSEQALQRKFGRALQDRNALGFGFDADFQVESY
                     LRHQGSTFVDRFDANSYLYITRAMDYFDLAGGHGGALANAFRGTPTRFCLVSFTSDWL
                     FPTRESREIVHALNAAAANVSFVEVESDKGHDAFLLEEPEMFRTLAGFLKGAASARGL
                     KDVP"
     regulatory      complement(4615..4690)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            4795..>5569
                     /locus_tag="VF991_12580"
     CDS             4795..>5569
                     /locus_tag="VF991_12580"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: protein motif:HMM:NF013939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEX9557327.1"
                     /translation="MDSPSLDSLRQEIDAIDGELHGLVRRRAALVDRISAAKPGGGLA
                     LRPGREALVMRQRLATHQGPFPPTAVYRMWREMMCAFTLMQTPDLKIAICRPADQPGF
                     WDLARDHFGCQIPFVANDTPAQVLAAVRANPTTLGVVPAPTEADTAPWWPPLAGHDAT
                     LPNVVARLPFLTMPNARARGISAFVLARMEPEDSGDDRALVSLEATTGLSRNRIAGAL
                     AKAGLPAFTSALDQVAGGVHHYLVELPGVLADGDERLREL"
BASE COUNT          899 a         1905 c         1860 g          905 t
ORIGIN      
        1 gcatgtcgtt gtctccgcgc gtgatcgcgc tgctgggctt tggtgaggcg ggatcggcga
       61 tcgcgcgggg gctttgcgcc gacggcggct ggcgcggcgc ggcgcgatct acgcccgctg
      121 ggccgggcga caacgccccg cgccgcctga tcgccatcga caccgcactc gaccaggacg
      181 cgcgcggcac ggcgctcggc cggcaagccc gggcgctcga tgtcgcgatc gagggccgct
      241 acaccgcggc gctgagcgag gcggacctgg tgatttgcgc cgtccagggc gaacacgcct
      301 tggaggccgc ccaggccgcc gcgccgctgc tgaagaaagg cgcacactat ctcgatctgt
      361 gcacggtcac cggcgcgatg tccgatgagg atcgcaccgc catcgagggc gcggccggcc
      421 gctacatcga catcgcggtc atgggcggct tcttcaagtc gggcatcaag gcgccgatgc
      481 tggtggcagg ggtagatgtc gagcccgtgg tcgcctggat gaacaccaac ggcttcgatg
      541 ccaaggcgct ggggccgaag cccggcagcg cctcgtcggt gaaaatgctg cgtagcgtgc
      601 tgatgaaggg tgtcgaggcg ctggccgtgg aatcgctggt cacggcccag cgtcagggca
      661 ttctcgacga agtgctggcc tgcttcagcg acgccgacca gctcccgttc cgcgatttta
      721 tcgccacgct ggtgcagacc catgtcgtgc acgcgcatcg gcgctgggag gagatgggcc
      781 tggtcgccaa gaccttgcgc gagaccggcg tcgatccgtt gatgaccgag acgaccgaga
      841 aaagcctccg ccgcaccgtc gacgctggga tcgcgccagc cgacggcaag gtgccgagcc
      901 tggccgatgc gctgaaaatc ctgtcggaga aggtcgttcg tggccggtga cgtgttcgac
      961 cggctggtca cgctgctcgg cgacgccaag gccaagttcc gcgtcatcga gcacgccgcc
     1021 gagggccgct cggaggcgat cagcgtcatc cgcggcaacc ggccggacca ggcggccaag
     1081 gccatggtgc tcgacctgcg cggcggcggc ggcggccggc gccacgtgct ggcgatcctg
     1141 ccgggcagcc gcaagctcga cttcaatgcc gtggccacgc tgttcgaagc gcgcaaatgc
     1201 ggcttcgcct cgcccgatac cgcccaggaa ctcaccggct gcgtcatggg ctcggtgccg
     1261 cccttcacgc tcaaccccgc gctcgccatc gtggccgacg aaggtctact ggccaacgac
     1321 accttgttct tcaacgccgg ccggctcgac cgttcgatgg aactcgacac caaggactgg
     1381 ctggccattg cccaaccgcg cgtcgccagg atcgcggcca aggcctagcg cacgaagcga
     1441 ctggctcttc caggcgtaca gccttggaag ggccgcatgc tggactatat tgcatcatgg
     1501 gcaacctgca tcggggactt ctgccatggc caaccgctca tctccccttc gaccgcgcct
     1561 catcggctgg agccgccaac tgaagtcgat cctgcttgcc cttggctttg tcctgatcgt
     1621 gcgaaccgtt gtcgccgaac cctacgaggt gccgtcgccg tcgatggtcc ccacgctcct
     1681 cgtcggcgat gagctgatcg ccagcaagtt cgcctatggt tacagcaaat attcttcgcc
     1741 gatcggtctg atgccggatt tctccggccg tctgttcggc aaacgaccgg agcgcggcga
     1801 cgtcatcgtc tttcgcctgc cccgcgatcc atcgacaacc tatgtgaaac gcctgatcgg
     1861 cctgcccggc gaccgcatcc aaatgcacag cgggcggctc tacatcaacg gcgccatcgt
     1921 tccccgccgc gccatcggca ggttcgccga cgatgccggc ggaggcagcg tgccgtcgac
     1981 cctctatgtc gagacgctgc caaacgggcg cgagcacgaa atcgtggaga tctccgatgc
     2041 cgaacagcac gacgatacgc cgccgttcct cgtgccgtcg aaacactact tcatgatggg
     2101 cgacaatcga gacaattccc tggacagccg cattgccgtt gccgacggcg gcgtcggctt
     2161 cgtcccggag gacaatctgg tcgcccgcgc cgatctgatc ctgctgtcgc gcgatccggc
     2221 catcgcctgg ttcgacgtgg ccgaatggcc gcacgccttc cggctcgcgc ggctattggg
     2281 ccgcatcaac tagcccctcg acacagaggc atggctgaca tctggcgttt cggccctgtc
     2341 ggcgaggccg acttcgagcc gttgctggcg ctgcgcatcg acgtgatgcg cgaacacctg
     2401 gagcgcgtgt tccgctacaa gccgtcacgc gcgcgacgca tcttccgcga gcatttcgac
     2461 gagcccgggc tgcggctgat cctggtcgac ggcaagcggg cgggctgcgt cggcttccgc
     2521 gtcggcaacg acgagatcaa gatcgactct ttctatctcg accgccgcca tcacaatcgg
     2581 gggctgggca cgacgatcct gaaggtgctg ctggccgaag ccgatgcgcg aggcctgccg
     2641 gtgcggctcg aagtgctgcg cggcagtccg gccgaccgct tctatgagcg ccatggcttc
     2701 gtgaagctcg atgaagacga cgtcgaagcc cgctatgagc gggtggtccc taatcccgcc
     2761 tcagcatgaa caccgcctgc tcgcccaaaa ggttggcgag caatggcggc aggctgatcg
     2821 gcttgctggt gcggtcgagc acgatggcgc gctcgacgcg cacgcccatg tcggcgcaca
     2881 gcgcgcggaa gtcgtcgatg ctgcacagat ggatgttggg cgtgtcgtac cacttgaagg
     2941 gcagcgacgg cgtctcaggc atgcggccgc cgaacaccag gcgcaggcgg acctgccagt
     3001 gcgcgaaatt gggaaacgac acgatagccc gcttgccgac ccgcagcatc tggcgcagca
     3061 cctcgcgcgg ctcgcgcgtg gcctgcaggg tctggctcag gatcacgtag tcgaaggcgt
     3121 catcgggata gtcgcgcaag tcggcgtcgg catcgccctg gatcaccgac aggccattgg
     3181 ccacgcaggc gttcacgccg gcttggctga gctccatgcc gcgcgcgtcg acccgcttga
     3241 agttcaccag gtaggccagc agcgaaccgt cgccgcagcc gacgtcgagc gcccgcgtgg
     3301 ccgggtcgac catgtcggcg atcagctgca gatcgacgcg aatggcagag ttcacggcac
     3361 gtctttcagc ccgcgcgccg aggcggcacc cttgaggaaa ccggcgagcg tgcggaacat
     3421 ctccggctcc tcgagcagga aggcgtcgtg gcccttgtcg ctttcgacct cgacgaagga
     3481 gacgttggcc gccgccgcgt tcagcgcgtg gacgatctcg cggctctcgc gcgtggggaa
     3541 caaccagtcg ctggtgaagg acaccaggca gaagcgggtc ggcgtgccgc gaaaggcgtt
     3601 ggccagcgcc ccgccatggc cgccggcgag gtcgaaatag tccatcgctc gcgtgatgta
     3661 gaggtagctg ttggcgtcga aacggtcgac gaaggtcgag ccctgatggc gcaggtagct
     3721 ctcgacctgg aaatcggcgt cgaagccgaa gcccagcgcg ttgcggtcct gcagcgcgcg
     3781 gccgaacttg cgctgcaggg cctgctccga cagataggtg atgtgcgcgg tcatgcgcgc
     3841 gaccgccagc ccgcgtgccg gtgccgtctg gtgcaggcga tagtcgccgc ccttccattc
     3901 gggatcggcc ataatcgcct ggcgcccgac ctcgtggaag gcgatgttct gggccgagtg
     3961 gcgcgccgcg caagcgatcg gcacggcaga gaacacgcgg gcgggatggc tggccgccca
     4021 ttcgagcacc tgcatgccgc ccatcgagcc gccaatgacg caaaacaggt cgggaatgcc
     4081 caggtgatcg agcagcgccg cctgggcgcg caccatgtcg cccacggtca ccaccggaaa
     4141 gcgcaggttc cacggctggc cgctcgccgg ctcgcaggcc agcggcccgg tcgtgcccat
     4201 gcagccgccc agcacgttga cgcagatgat gaagtagtgc gccgggtcga gcaccttgcc
     4261 cggcccaacc atgctctccc accagccctc cttgccggtc accggatgct gctctgccgc
     4321 gaactggtcg ccggtcaggg cgtggcagac caggaccgca ttggacttgt cgggattgag
     4381 cgtgccgtag gtctgatagg ccacccgata ggggccgaga tcgacgccgc agtcgagccg
     4441 aagcggccgc tcgatgccca aaaccgcgtg gcggcatcgg gcgagcgcct ttcgctcggg
     4501 ttccgtaagg tcgtccaact ccatggcgct cgatccgtcc atgttcctct cccgcgccgt
     4561 cgggcgcacg aggcggccga cgaaaaagcc cccgaccgac aaagggcggg ggctttttag
     4621 agcgctccga ccttttagcg aggtttaacg tggccgcaag ccggtcggct caaattccac
     4681 ggaaggcttc tatacggagg tcgccgggat tgcgcaagca ccctgaagtt tcttgccttt
     4741 acgcggcctg cccggacgta gtatcgccgc tcgctcacag gaaccaccga tcatatggat
     4801 tctcccagtc tcgacagctt gcgccaggaa atcgacgcca tcgatggcga attgcacggc
     4861 ctggtccgcc gccgtgccgc gctggtcgat cgcatttcgg ccgccaagcc aggcggcgga
     4921 ctggcgttgc ggccgggccg cgaggccctg gtcatgcgcc agcgcctggc gacgcatcaa
     4981 gggccgttcc cgccgaccgc cgtctaccgc atgtggcgcg agatgatgtg cgccttcacc
     5041 ctgatgcaga cgccggactt gaagatcgcc atctgccggc ccgccgatca gccgggcttc
     5101 tgggacctcg cgcgcgacca tttcggttgc cagatcccgt tcgtcgccaa cgacacgccg
     5161 gcccaggtgc tggcggcggt gcgcgccaat ccgacgacgc tcggcgtcgt gccggcgccg
     5221 accgaggccg acacggcgcc gtggtggccg ccgctcgcgg ggcacgacgc gactttgccc
     5281 aacgtggtgg cgcggctgcc cttcctgacc atgcccaacg cacgggcgcg cgggatatcg
     5341 gccttcgtgc tggcccgcat ggagcccgag gactcgggcg acgatcgtgc cctggtctcg
     5401 ctcgaggcca cgaccggcct cagccgcaac cgcattgccg gtgcgctggc caaggccggc
     5461 ctgcccgcct tcacttcggc gctggaccag gttgccggcg gcgtgcatca ctacctcgtc
     5521 gagcttccgg gcgtgttggc cgacggcgac gagcgcttgc gcgagctcg
//
LOCUS       DASWGA010000531         1675 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_436199, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000531 DASWGA010000000
VERSION     DASWGA010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436199"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..291
                     /locus_tag="VF991_12585"
     CDS             37..291
                     /locus_tag="VF991_12585"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX9557328.1"
                     /translation="MSAIQSVWVSLLDENSFVRVAPDGRILDRISVPGRRVVACVLGG
                     DDRKTLFCVSMDPDRGTETGPKSQSYVDAAVVEVPGAGYP"
     gene            333..1274
                     /locus_tag="VF991_12590"
     CDS             333..1274
                     /locus_tag="VF991_12590"
                     /inference="COORDINATES: protein motif:HMM:NF016817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase/aspartoacylase
                     family protein"
                     /protein_id="HEX9557329.1"
                     /translation="MSDNPPIEFAFPELRRWEKGAAPYIHVLESGKPGPAVMVAALTH
                     GNEVSGAVVVDALLAAGLKPRQGTLIFSFNNIEAYHSFDAKTPFKSRLVDEDFNRTWG
                     RLDQPANTVETRRAQVVKPFIERADFLLDLHSMHDDGVPLMLAGPLDKGVALAKKVGT
                     PVDIIRDAGHAAGMRMRDYGGFGDPKSPKNALLIETGQHWRASSVTVAKDVTARFLAE
                     TGIVEAADLPADWKQPTPDKQRVVQVTHAIATKRGNFTPARRFAGQEVIAQAGTLLGH
                     DDGEPVTTPYDDCVLVMPAVNRPLRAGVTVVRLGRLV"
     gene            complement(1243..>1675)
                     /locus_tag="VF991_12595"
     CDS             complement(1243..>1675)
                     /locus_tag="VF991_12595"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HEX9557330.1"
                     /translation="IAIVAIASNVALNLAFLYGTSLAHVGIALASSLSGWLNTAMLAT
                     VLVRRDQWIADQRLVSRSIRMVGATLGMGAALWLALGLLASQLAHANLVGIIALLGVC
                     AAGAAIYAVLGALLGVVRLSELRLVIRREPGLRPIDPGEQP"
BASE COUNT          306 a          556 c          547 g          266 t
ORIGIN      
        1 tcgacgacat gaccgtggat ggggtcggtc gagcctatgt cggcgatcca atccgtgtgg
       61 gtcagtcttc tcgacgagaa ttccttcgtt cgtgtcgcgc cggatgggcg cattctcgac
      121 cgcatttccg ttccaggccg gcgcgttgtc gcgtgcgtgc tgggtggtga cgatcgcaag
      181 actttgttct gtgtcagcat ggaccccgat cgaggcaccg aaaccgggcc gaaatctcaa
      241 tcctatgtgg atgctgcagt tgtcgaagtg cccggcgcag gctacccata aacttcaaga
      301 agttttcttt gcagtgcgac ggtcccaaac gaatgtctga caatccgccg atcgaattcg
      361 ccttccccga gctgcgccgc tgggaaaagg gcgccgcgcc ctacatccat gtgctcgaaa
      421 gcggcaagcc ggggcctgcg gtgatggtgg cggcactcac ccacggcaac gaggtgtcgg
      481 gcgccgtcgt ggtcgatgcg ctgctcgcag cagggctgaa gccgcgccag ggcacgctga
      541 tcttttcctt caacaacatc gaggcctatc acagcttcga tgccaagacg ccgttcaagt
      601 cgcggctggt tgacgaggat ttcaaccgca cctggggccg gctcgaccag ccggccaaca
      661 cggtcgagac ccggcgggcg caggtggtga agcccttcat cgagcgcgcc gacttcctgc
      721 tcgatctcca ttcgatgcat gacgacggcg tgccgctgat gctggcaggc ccgctcgaca
      781 agggcgtggc actggccaag aaggtcggca cgccggtcga catcatccgc gatgccggcc
      841 acgccgccgg catgcgcatg cgcgactatg gtggtttcgg cgatcccaag agtccgaaga
      901 acgccttgtt gatcgagacc ggccagcatt ggcgggcctc ctcggtcacc gtcgccaagg
      961 acgtgacggc gcgcttcctg gccgagaccg gcatcgtcga agcggccgac ctgccggccg
     1021 actggaagca gccgacgccc gacaagcagc gcgtcgtcca ggtcacccat gccatcgcca
     1081 ccaagcgcgg caacttcacg ccggcgcggc gcttcgccgg ccaggaggtg atcgcccagg
     1141 ccggcaccct gctcggccac gacgacggcg agccggtgac gacgccctac gacgactgcg
     1201 tgctggtgat gcccgcggtc aaccggccgc tgagggccgg cgtcacggtt gttcgcctgg
     1261 gtcgattggt ctgaggccgg gctcgcggcg aatcaccagg cgcagctccg acagccggac
     1321 cacgcccagc agcgccccca gcacggcgta aatcgccgcg cccgcggcgc agacgccgag
     1381 cagggcgatg atgccgacaa gattggcatg ggccaattgc gaagccagca ggcccagcgc
     1441 caaccacaag gccgcgccca tgccgagcgt cgcgcccacc atgcgaatcg agcgcgaaac
     1501 cagccgctga tcggctatcc attggtcgcg ccggaccagg acagttgcga gcattgccgt
     1561 attcagccag cccgacagcg acgaggccag cgcgatgccg acatgggcaa ggctcgtgcc
     1621 gtagaggaag gcgagattga gcgcgacatt ggaggcgatc gccacgatcg cgata
//
LOCUS       DASWGA010000532         1635 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1449557, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000532 DASWGA010000000
VERSION     DASWGA010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1449557"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..637
                     /locus_tag="VF991_12600"
     CDS             <1..637
                     /locus_tag="VF991_12600"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557331.1"
                     /translation="IHALIGPNGAGKTTIFNMIAGVYAPDGGAVRLDGRAISGLRPDR
                     VCDAGVGRTFQLVKPFKGLSVLENVTVGALHRTADLARARDSADAILSRLGLFERRHQ
                     LAESLTLPDRKRLEVARALATEPKLLLLDEVMAGLRPTEVDVMVGFLRELNGKTGLTI
                     LLIEHVMRAVMALAAEIVVVSYGEKIAEGTPQEIARHQAVLDVYLGEPEAP"
     gene            634..1350
                     /locus_tag="VF991_12605"
     CDS             634..1350
                     /locus_tag="VF991_12605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557332.1"
                     /translation="MSTALLTVENLDLYYGDAQALSEVSLEIAAGEIVAIVGANGAGK
                     SSLIRVLHGIEKPARGTVRFDGVDIAGWPSHRVCDAGIGHVAEGRQVFPNLSVLENLE
                     MGATPRRARANLKQTLERVFTMFPRLSERRRQAAGTLSGGEQQMLAIGRCLMGQPRLI
                     MFDEPSLGLAPTIVQEVFRIVRRLNEAGLTILLVEQNVMASLKIAHRGYVLENGRVEL
                     SGGAAELLGNDRVRQAYLGL"
     gene            1426..>1635
                     /locus_tag="VF991_12610"
     CDS             1426..>1635
                     /locus_tag="VF991_12610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEX9557333.1"
                     /translation="MNRRDMLKAGIAVGALGVMPRMAAAQATYAPAPKGWRSYVLTAR
                     IEPTDGAIRAWIPLPTFEAADWQRPG"
BASE COUNT          256 a          576 c          558 g          245 t
ORIGIN      
        1 gatccacgcc ctgatcgggc ccaacggcgc gggcaagacc acgatcttca acatgatcgc
       61 cggcgtctac gcacccgacg gcggcgccgt ccgcctcgac ggccgggcga tctcggggct
      121 gcggcccgat cgcgtgtgcg acgccggcgt cggccgcacc ttccagctcg tgaaaccctt
      181 caaggggctg agcgtgctcg agaacgtcac cgtgggcgcg ctgcaccgca cggccgatct
      241 cgcccgcgcg cgcgacagcg ccgatgcgat cctgtcgcgg ctcggcctct tcgagcgccg
      301 ccatcagctc gccgagagcc tgaccctgcc cgaccgcaaa cggctggaag tggcgcgggc
      361 gctcgccacc gagcccaagc tgctgctgct cgacgaggtg atggcgggct tgcggccgac
      421 cgaggtcgac gtgatggtgg gctttttgcg cgaattgaac ggcaagaccg ggctcaccat
      481 cctgctgatc gagcacgtca tgcgcgcggt gatggcgctt gccgcggaaa tcgtggtggt
      541 gagctacggc gagaagatcg ccgagggcac gccgcaggag atcgcgcgcc accaggccgt
      601 gctcgacgtc tatctcggcg agccggaggc gccgtgagca ccgccctcct cacggtcgaa
      661 aacctcgacc tctactacgg cgatgcgcag gcgctgagcg aagtctcgct cgagatcgcc
      721 gccggcgaga tcgtggccat cgtcggcgcc aacggcgcgg gcaagagctc gctgatccgc
      781 gtgctgcacg gcatcgaaaa gccggcccgc ggcacggtgc gcttcgatgg cgtcgacatc
      841 gccggctggc cctcccaccg cgtatgcgac gccggcatcg gccacgtcgc cgagggacgc
      901 caggtcttcc ccaacctttc ggtgctggaa aacctcgaga tgggcgccac gccgcggcgc
      961 gcgcgcgcca acctgaaaca gacactggaa cgcgtgttca cgatgttccc gcggctctcc
     1021 gagcgccgcc gccaggcggc cggcacgctg agcggcggcg agcagcagat gctggcgatc
     1081 ggccgctgcc tgatgggcca gccccgccta atcatgttcg acgaaccatc gctcgggctt
     1141 gcgcccacca tcgtccagga ggtctttcgc atcgtccgcc ggttgaacga ggcgggactg
     1201 accatcctgc tggtcgagca gaacgtgatg gcgtcgctta aaatcgccca ccgcggctat
     1261 gtgctggaga acggccgcgt cgaattgagc ggcggcgccg ccgagctgct gggcaacgac
     1321 cgtgtgcgcc aggcctatct cggcctctaa cgattgacgg cgacgccatt ggcctgcaat
     1381 cctgtcgcct ccgatactgg cgaagccttg gcggaggaac cgaccgtgaa tcgtcgcgat
     1441 atgttgaagg ccggcattgc cgtcggcgct ctcggtgtga tgccgcggat ggcggcggcc
     1501 caggcgacct atgcccccgc gccgaagggc tggcgctcct acgtgctgac cgcgcggatc
     1561 gagccgaccg acggcgccat ccgggcctgg atcccgctgc cgaccttcga ggcggccgac
     1621 tggcagcgtc cgggc
//
LOCUS       DASWGA010000533         4623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_436382, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000533 DASWGA010000000
VERSION     DASWGA010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4623
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436382"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VF991_12615"
     CDS             <1..408
                     /locus_tag="VF991_12615"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein 8"
                     /protein_id="HEX9557334.1"
                     /translation="NFFDLAGRLFLVDLPGYGFAQVSRSMKETWQDLASAYLRGRPTL
                     KRVCLLIDSRHGVKDSDRETMKNLDSAAVSYQLVLTKTDRLGAADVARAVAAAEAVAR
                     KHGAAHPEVLPTSSETGFGIAELRTEIAAVASG"
     gene            complement(413..1363)
                     /locus_tag="VF991_12620"
     CDS             complement(413..1363)
                     /locus_tag="VF991_12620"
                     /inference="COORDINATES: protein motif:HMM:NF025203.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HEX9557335.1"
                     /translation="MRATILLCLLAVPAFAQTPTQPSPKPAQGTPAAPGGPTSQQAAP
                     NPPPVPLPHWFAEIDTAKKGEVSRADFVKYRMKLFDELDINKDGKLSLDEFLKVAEPP
                     FSSDVQGGLSLEERRSRARAEFQNIDTNRDGFIERAEIEAVIHAEFNQYDTDRDNKVT
                     EPEVRLIVQRSLQRQAAERQQIEARRRQGMLAISDFIDMQLLEADKLDKNNDGKISQQ
                     EYVVVAGPADGEQAKDLLPYDIRRQLVIRKFQEIDTNKDRFLTEDELKKAQEADAAKM
                     REIIPTLQPQPPAAPRPAPSRGQQPAPAPGLPPGLPQNTR"
     gene            complement(1490..2173)
                     /locus_tag="VF991_12625"
     CDS             complement(1490..2173)
                     /locus_tag="VF991_12625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9557336.1"
                     /translation="MAPGNYVVSAVSPGVPPFPISAKISAGQSTYLQVSPGFNGWNLS
                     AARPDTAGSEVQSMHLTPAICPSSEGKPGVTVSSRQADDVLARGAEAEQRGDFAAALS
                     IYTEALQKRVTRFDAIPDVVDRAIDAALRMRPAPPIPEAAKQHAAAAEATIRSAKVRA
                     DLAVARREYANALALAPWWADVWFNLAKVDEQLGSTADVRRDLTWYLRAAPDAPDRDQ
                     IRRQIEALR"
     gene            complement(2449..3996)
                     /locus_tag="VF991_12630"
     CDS             complement(2449..3996)
                     /locus_tag="VF991_12630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557337.1"
                     /translation="MTCTGVPHVPGSGFGSGGMGGAASALGIGFGILNILLDQQMQSG
                     NQAPPGNAPPVMGNDAPTAPNPAARPVTESQKAAILSQIRPVRTGSYAATAPSTASTT
                     SDVESQKLAILNQIRPTTGTSAGGAGSSSASAQKAAKPGRTQESVEAASANRREPFDS
                     AKPGSTRTAADQLCQAAGNPNNCIGKFGGSRTASAANPGADNAPGAVVLPLNPGTPRV
                     PDQVCGASLPLDRPVKVAGFGLGPRRAAGYPIAHDLDQLRSFDYSDIKANLRASSPEQ
                     LAKWTLQARQEIATLETVIDTIKVKLFASELGAGVPVKSLSEAAKDALYEAVKDAVPF
                     WRQMEAQGQHKAEADVKTAAEHFDAVDKAVLERDLSTGRLAAALRGIAERADLLELTR
                     SYATSLLEGTLAVDYAFKGDKGAAWEHIGKAASALIPMAQWVVPAEALPMLVKSEAWA
                     KVALIAIEVSARGKEAVDARSEALEARTAAQETARELANRADGLNAKLRDLRNVQQLI
                     AQEPRCN"
     gene            complement(4276..>4623)
                     /locus_tag="VF991_12635"
     CDS             complement(4276..>4623)
                     /locus_tag="VF991_12635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX9557338.1"
                     /translation="QRPTPLLLHYGPGDYNCLHRDLYGELVFPLQGTVLLSDPRHDFS
                     GGEFMLVEQRPRMQSRGEVVPLALGDAVIFAVNQRPVKGSRGFHRTAMRHGVSSLRQG
                     ERFTLGIIFHDAA"
BASE COUNT          724 a         1512 c         1542 g          845 t
ORIGIN      
        1 aatttcttcg acctcgccgg ccgccttttc ctggtcgacc tgccgggcta cggcttcgcc
       61 caggtctcgc ggtcgatgaa ggagacctgg caggacctgg cgtcggccta tctgcgcggc
      121 cgcccgacgc tgaagcgcgt ctgcctgctg atcgattcgc gccacggcgt gaaggactcc
      181 gaccgcgaga ccatgaagaa cctcgacagc gccgccgtct cctaccagct cgtgctgacc
      241 aagaccgacc ggctcggggc cgccgacgtc gcccgcgccg tggctgccgc cgaagcggtc
      301 gcgcgcaagc acggcgctgc gcatcccgag gtgctgccga ccagcagcga gacggggttc
      361 ggcattgccg agctacggac ggaaattgcg gcggtagcgt cggggtgagc cctcatcgcg
      421 tattttgcgg caggccgggc ggcagaccgg gagccggcgc cggctgctga cctcgcgacg
      481 gcgccggacg aggcgcagcc ggcggttgcg gctgaagggt cggaatgatc tcgcgcatct
      541 tggcggcgtc ggcttcctgg gccttcttga gctcgtcctc ggtgaggaag cggtccttgt
      601 tggtgtcgat ctcctggaac ttgcggatga cgagctgacg gcggatgtca tagggcaaca
      661 ggtccttggc ttgctcgccg tccgccggtc cggccaccac gacatattcc tgctggctga
      721 tcttgccgtc gttgttcttg tcgagcttgt cggcctcgag aagctgcata tcgatgaagt
      781 cgctgatcgc cagcatgccc tggcgccgac gtgcctcgat ctgctggcgc tcggccgcct
      841 gccgctgcag cgagcgctgc acgatcaggc gcacctccgg ctcggtcacc ttgttgtcgc
      901 gatccgtgtc gtactggttg aactcggcgt ggatcaccgc ctcgatctcg gcgcgctcga
      961 tgaagccgtc acgattggtg tcgatattct ggaattcggc ccgggcgcgg ctgcggcgct
     1021 cctccaggct cagcccaccc tgcacgtcgc ttgaaaaagg cggctcggcc accttgagga
     1081 attcgtcgag cgacagcttg ccatccttgt tgatatcgag ctcgtcgaac aacttcatgc
     1141 ggtacttcac gaagtcggcg cgcgacacct cgcccttctt ggcggtatcg atctcggcga
     1201 accagtgcgg cagcggcacc ggaggaggat tgggcgcggc ctgctgactg gtcggcccac
     1261 ccggcgcggc cggagtaccc tgtgcgggct ttggcgaagg ctgcgttggc gtttgggcaa
     1321 aggcaggaac ggccagtagg cacagcagga tcgtcgctct catgaacctc gtcctcacct
     1381 cagcacgcaa ggtaagagat atccagatgg cgcaccatga acttgcggtt gtaaaccttt
     1441 tgcggcccgg cccgtcgcaa gtatgcggcg tcgttggaga cgaccttctt cagcgcagcg
     1501 cctcgatctg cctgcgtatt tgatcgcggt ccggcgcatc gggcgccgcg cgcagatacc
     1561 atgtgagatc gcgacggaca tcggccgtgc tgccgagctg ctcgtctact ttggcgagat
     1621 tgaaccagac gtcggcccac catggcgcca gggcgagcgc attggcgtac tcgcggcggg
     1681 cgacggccag atccgcgcga acctttgcgc tcctgatcgt ggcttcggcc gccgccgcgt
     1741 gttgcttggc ggcctccggt ataggcggcg ccggccgcat cctgagcgcc gcgtcgatgg
     1801 cgcgatcgac gacgtcgggg atggcatcaa agcgcgtcac acgcttttgc agggcctcgg
     1861 tgtagatgct caacgcggcg gcaaaatcgc cgcgctgttc ggcctcggcg cctcgcgcca
     1921 gcacatcgtc tgcctgccga ctactgacgg tcacgcccgg cttgccctcg gaagacgggc
     1981 agatggccgg cgtcaagtgc atcgactgga cttccgatcc ggcggtgtcc ggcctcgccg
     2041 cgctgagatt ccatccgttg aagccaggcg aaacctgcag gtaggtgctt tgtccagccg
     2101 agatcttggc cgatatcgga aacggcggca cgcccggcga caccgccgag accacgtagt
     2161 tgcccggcgc caagtcgcag ttcagcgcgc caacaaggtg ggccggaccg atcggcacgt
     2221 tgtcgaccga gatggtcggc gaggcggcgg agccgatgta gttgtagggg cgatagacat
     2281 acaggcggcc gcgatcttgc ggcacagcgc cgatctggga ctccgcgacc gtcggtccgt
     2341 tggcgaatga acaccccgcc aaaaggggca gcattgccat caacgcgacg ccgggcgtcg
     2401 gcttgaattt ggctgctgcc ttggcggcgc ttggcacggt cgaggacgtc aattgcagcg
     2461 cggctcttgg gcaatgagct gctgaacgtt gcgcagatcg cgaagcttgg cgttgagccc
     2521 atcggcgcgg ttggcaagtt cacgcgcggt ttcctgggcg gcggtccggg cttccagcgc
     2581 ttccgatcgc gcgtcgacgg cctccttgcc tcgcgcggaa acctcgatcg caatcagggc
     2641 gaccttggcc cacgcttccg acttgaccag catcggcagc gcctccgcgg gcaccaccca
     2701 ttgcgccatc ggtatcaagg cagaagcggc tttcccgatg tgctcccagg ccgcgccctt
     2761 gtcgcccttg aacgcatagt cgactgccag cgtgccttcc agcaacgagg tcgcgtagct
     2821 tcgcgtcagc tccagcaggt ccgccctttc cgcgatgcct ctcagtgccg ccgccagcct
     2881 tcccgtggag aggtcgcgtt caagaacggc cttgtcgacg gcgtcgaagt gttcggcggc
     2941 ggttttcaca tcagcttctg ccttgtgctg gccctgcgct tccatctggc gccagaaggg
     3001 gacggcgtcc ttgaccgcct cgtagagcgc gtcttttgcc gcctcggaca gcgatttaac
     3061 cgggacaccg gcgccgagct cggaagcgaa cagcttgacc ttgattgtat cgatcacggt
     3121 ctcgagcgtg gcgatttcct gacgcgcctg gagagtccac tttgccagct gttcgggact
     3181 gctggccctg aggttggcct tgatgtcgga atagtcgaag gagcgtagct gatcgagatc
     3241 gtgtgcgatc ggatagccgg cagcgcgacg ggggccgagc ccgaagccgg ccaccttcac
     3301 gggccggtcg agcggcaggc tggccccaca cacctggtcg ggcacgcgcg gcgtgccggg
     3361 gttgaggggc agcaccacgg cgccaggcgc gttgtcggcg ccggggttcg ccgccgatgc
     3421 cgtccggctg ccgccgaact tgccgataca gttattaggg ttgcccgcgg cctggcagag
     3481 ctgatcggcc gcggtgcggg tcgagccggg cttggcgctg tcgaagggtt cccgccgatt
     3541 tgcgctggcc gcttcgacgg actcctgagt ccggcctggc ttggccgcct tctgggcgct
     3601 tgctgagctg ctgcccgctc cgcctgcgga ggttcctgtc gtcgggcgaa tttgattgag
     3661 gatcgcgagc ttctgcgatt cgacgtccga cgtcgtcgat gccgtcgaag gagccgtcgc
     3721 ggcatagctt cctgttctga ccgggcggat ctgggagagg atcgcagcct tctggctctc
     3781 tgtgaccggc cgcgcagccg gattaggcgc ggtgggtgca tcgttcccca taaccggtgg
     3841 agcatttccg ggcggcgcct gatttccgga ctgcatttgc tggtcgagga ggatgttcag
     3901 gatgccaaag ccaattccca gcgcactggc tgctccgccc atgccgccag agccgaagcc
     3961 actgccggga acatgcggaa caccggtaca ggtcaccggc catcccgtgc actgcgcgct
     4021 cgcatacgtc gatgttgcga gcataagcgc cccggccgtg agcccgagcg cgacgtgccg
     4081 ccctaccatt tcgcgacccc caaagaaggt ttggccacct tacgcttacg aaggataacc
     4141 gggcgtcgcc tcgcaacggg acacggaggc agcacgccta ccgaaaatac cccaacgccg
     4201 caaatcctag ccaagacagc ggcaggccac aacgacaacc tatggttcgc acctgctgca
     4261 ccacgtgtga atgggttagg ccgcgtcgtg gaaaatgatg ccgagggtga agcgctcgcc
     4321 ctggcgcagg ctcgacacgc cgtggcgcat cgccgtgcgg tggaagccgc gacttccctt
     4381 caccggccgc tggttgacgg caaagatcac cgcgtcgcca agggccagcg gcacgacctc
     4441 gccgcgcgac tgcatgcgcg gccgctgctc gaccagcatg aactcgccgc cgctgaagtc
     4501 gtgtcgggga tcgcttagaa gcacggtccc ctgcagcggg aacaccagct cgccatagag
     4561 gtcgcggtgc aggcagttgt agtcgcccgg tccgtagtgc agcagcagcg gcgtcggccg
     4621 ctg
//
LOCUS       DASWGA010000534         4505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_575111, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000534 DASWGA010000000
VERSION     DASWGA010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4505
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_575111"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..120
                     /locus_tag="VF991_12640"
     CDS             <1..120
                     /locus_tag="VF991_12640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9557339.1"
                     /translation="KTLPGLVGSRIIEGAGHWVQQERPGEVNKLLIDFLKGLP"
     gene            117..674
                     /locus_tag="VF991_12645"
     CDS             117..674
                     /locus_tag="VF991_12645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557340.1"
                     /translation="MRPAILVAIAFLALAACAGPPALSAKLPDLAGIDLARGPAPSYR
                     DAITVAAVGVGTDTATPWTSEAGPAQVKEALIRTLIAARLERAESGRFRLDAILLTLQ
                     RPYAGFAMTVTATIGYRLIDSTTGAVVYTATLTTPGTATLNDAVSTDFRLRIADESAV
                     RANFRRLVEELYALPDRPITSSPRT"
     gene            complement(652..1062)
                     /gene="msrB"
                     /locus_tag="VF991_12650"
     CDS             complement(652..1062)
                     /gene="msrB"
                     /locus_tag="VF991_12650"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008833943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX9557341.1"
                     /translation="MSTKTETFPIQKSDDEWRKSLDPLQYQVLRKHGTERAGTSPLNN
                     EKRKGAFRCAGCGEPLFDSGTKFESGTGWPSFWEPLPGAVGTSADRSFFMTRTEVHCA
                     ECGGHLGHVFPDGPQPTGQRYCMNGAALTFEEKK"
     gene            complement(1092..>4505)
                     /locus_tag="VF991_12655"
     CDS             complement(1092..>4505)
                     /locus_tag="VF991_12655"
                     /inference="COORDINATES: protein motif:HMM:NF016944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HEX9557342.1"
                     /translation="ALADAATSWSDRFRIALQASLGEVEGRAAARRWRDWFPSIYRDS
                     FDAGQAVADLALLQAALSGRPLGVRLDREPGLPAHRFTLRLFHPREPIALSDILPLLE
                     NLGLRVLSEAPFVLGAPAGGPGDDAVALQVLSVETMDKSAVDLAAAGPRLAETLDRLW
                     VGALENDGLNRLVLGAGLAWREVAILRAYAKYLRQTGIAFSQAYMERALCLYPAIARA
                     MADLFRARFDPALGDAASAARKARIEAIDTTLAAALESVTTLDEDRILRRFLNALRSS
                     LRTNYWQTGPEGASKEWISFKIDSRAIDELPAPRPMVEIFVYSPRMEGIHLRGGRVAR
                     GGIRWSDRPEDFRTEILGLMKTQMVKNAVIVPVGSKGGFYVKRPPSGGTREQVQAEGI
                     ACYKTLIRGLLDITDNYAEGGVKPPADVVRHDGDDPYLVVAADKGTATFSDIANALAQ
                     EYGYWLDDAFASGGSAGYDHKKMAITARGAWESVKRHFRELGQDIQTTPFTVTGIGDM
                     SGDVFGNGMLLSRHIKLIAAFDHRHIFVDPMPNPATSWAERKRLFDLPRSSWMDYDKS
                     LLSAGGGIYDRAAKSITLSPEAREVLGIEAPSLMPIDLMRAILTAPADLLYFGGIGTY
                     VKASSESQADAGDRANDSLRVNAAQLRVRVVGEGANLGLTQRGRVEAALGGCKINTDA
                     LDNSAGVDTSDHEVNIKVATGEAIARGLLKREDRDALLFAMTDEVANLVLRHNYQQSQ
                     AISVAAEQAGEEHDRLERFMRTLERKGHLDRAVEFLPDSAAMRARAQNRQYLARPELS
                     VLLAYAKIDLNDEILRSDLPDDPLLEGELLRYFPSALQEKYEPAIRAHRLRREIAALQ
                     VMNSLVNRCGPTFVHNIGLRTGAPAAAIARAFAVVRDAWKLRELWGDIEALDPALKAE
                     AQIRMLVASQRFLTRVVQWALRRLVQPLDTMAATEQLGTAVAALGDLPAALIGEAEDA
                     ALAERAAAFEAMGAPAGVARRAAALETLAAAGDLMLAARANGCSIEAATRVYFRLGER
                     LALAKLATAAQKLPREGQWPAQAALAVQDELATLHADLLTSALRAAGPPSSGVGGAAD
                     PDAVLARWSEQRKLALDRVDRLLKEELASAGALDLAMLSVATAELRTLV"
BASE COUNT          677 a         1526 c         1601 g          701 t
ORIGIN      
        1 aaaaccctgc cggggctggt cggcagccgc atcatcgagg gcgccggcca ttgggtgcag
       61 caggaacggc ccggcgaggt caacaaactg ctgatcgact tcctgaaagg cttgccatga
      121 ggcccgccat cctcgtggcg atcgcattcc tggcgctggc agcctgcgcg ggacctccag
      181 ctctctcggc aaagcttccc gatctggcgg gcatcgacct ggcgcgtggc cccgccccgt
      241 cgtatcgcga cgccatcacc gtagcggcgg tcggcgtcgg cacggacacc gcgacaccct
      301 ggacatcgga agctggtccc gctcaagtca aggaagcgct gatccgcacg ctcatcgccg
      361 ccaggctgga gcgcgccgag agcgggcgct tccgtctcga cgccattttg ctgacgctgc
      421 aacggcccta tgccgggttc gccatgaccg tgaccgcgac catcggctac cggctgatcg
      481 actcaacgac cggcgcggtc gtctacaccg ccacgctgac gacgccgggc accgccacgc
      541 tgaacgacgc cgtgtcgacc gatttccggc tgcggatcgc cgacgagagc gcggtccgcg
      601 ccaatttcag aaggctggtc gaggagctct atgcgttgcc cgaccgccca atcacttctt
      661 ctcctcgaac gtgagcgccg cgccgttcat gcagtagcgc tggccggtcg gctgcggtcc
      721 gtcgggaaag acatggccaa gatggccgcc gcactcggcg cagtgcacct cggtgcgggt
      781 catgaagaag ctgcggtcgg ccgacgtgcc gacggcgccg ggcaacggct cccagaacga
      841 cggccagccc gtgccgcttt cgaacttggt gccggagtcg aacaacggct cgccgcagcc
      901 ggcgcagcgg aatgcgccct tgcgcttttc gttgttgagc gggctggtgc cggcgcgctc
      961 cgtgccgtgt ttgcgcagca cctggtactg cagcggatcg agcgacttgc gccactcgtc
     1021 gtcgcttttc tggatcggga acgtctcggt cttggtgctc atgatgcctc cgatgtggcg
     1081 atgacccgtt cctacacaag agtgcgcaat tccgccgtgg ccaccgacag catggcgagg
     1141 tcgagggcgc ccgccgacgc cagctcctcc ttcaggagcc ggtcgacgcg atcgagggca
     1201 agcttgcgct gctcgctcca gcgcgccagc accgcatcgg ggtcggccgc gccgccgacg
     1261 cccgagcttg gcggtccggc ggcgcgcaat gccgaggtca aaagatcggc atgcagggtc
     1321 gcgagctcgt cctgcaccgc aagggctgct tgcgccggcc actggccctc gcgcggcagc
     1381 ttctgcgccg cggtggccag cttggccagc gcgagacgct cgccgagccg gaaatagacg
     1441 cgggtcgcgg cctcgatgct gcagccgttg gcacgggctg ccagcatcag gtcgccggcg
     1501 gcggccagcg tttcgagcgc cgcggcgcgg cgggcgacgc cggccggcgc gcccatggcc
     1561 tcgaaggctg ccgcgcgctc ggccagggct gcgtcttcgg cctcgccgat cagcgcggcc
     1621 ggcaggtcgc ccagcgcggc caccgccgtc ccgagctgct cggtcgccgc catggtgtcg
     1681 agcggctgca ccaggcggcg cagcgcccat tgcacgaccc gcgtgaggaa gcgctgcgag
     1741 gccaccagca tgcggatctg cgcctcggcc ttgagcgccg ggtcgagcgc ttcgatgtcg
     1801 ccccacagct cgcgcagctt ccaggcgtcg cgcaccacgg cgaaggcgcg ggcgatggcg
     1861 gcggcgggcg cgccggtgcg caggccgata ttgtgcacga aggtcggccc gcagcgattg
     1921 accagcgagt tcatgacctg gagggccgcg atctcgcggc gcagccggtg ggcgcggatc
     1981 gcaggctcat acttctcctg cagcgcgctc gggaagtagc gcaaaagctc gccttccagc
     2041 agcggatcgt cgggcaggtc cgaccgcagg atctcgtcgt tgagatcgat cttggcgtag
     2101 gccaacagca ccgagagctc gggccgggcg agatactggc ggttctgggc gcgggcgcgc
     2161 atcgccgcgc tgtcgggcag gaattcgacg gcgcgatcga gatggccttt gcgctccagg
     2221 gtgcgcatga agcgctccag ccggtcgtgc tcctcgccgg cctgttcggc ggcgacgctg
     2281 atcgcctggc tctgctggta gttgtggcgc agcaccaggt tggcgacctc gtcggtcatg
     2341 gcgaacagca gggcatcgcg gtcctcgcgc ttcagaagac cgcgggcgat cgcctcgccg
     2401 gtcgcaacct tgatgttgac ctcgtggtcg gaggtgtcga cgccggccga attgtcgagc
     2461 gcgtcggtgt tgatcttgca tccgccgaga gccgcttcga cccggccgcg ctgcgtcaga
     2521 ccgagattgg cgccctcgcc gaccacgcgc acgcgcagct gcgcggcgtt gacgcgcagg
     2581 gaatcgttgg cgcggtcgcc cgcgtcggcc tggctctcgc tcgacgcctt cacgtaggtg
     2641 ccgatgccgc cgaaatagag cagatcggcc ggcgccgtca ggatggcgcg catcaggtcg
     2701 atcggcatca gcgagggcgc ctcgatgccc aaaacctcgc gcgcctcggg cgacagcgtg
     2761 atcgacttgg cggcgcggtc gtagatgccg ccgcccgccg acaggagcga cttgtcgtag
     2821 tccatccatg acgagcgcgg caggtcgaac aggcgcttgc gctcggccca gctcgttgcc
     2881 ggattgggca tcggatcgac gaagatgtgg cgatggtcga aggcggcgat cagcttgatg
     2941 tggcgcgaca gcagcatgcc gttgccgaac acgtcgcccg acatgtcgcc gatgccggtg
     3001 acggtgaacg gcgtggtctg gatgtcctga ccgagctcgc ggaagtggcg cttcaccgat
     3061 tcccaggcgc cgcgtgcggt gatggccatc ttcttgtggt cgtagcccgc cgagccgccc
     3121 gaggcgaagg cgtcgtcgag ccagtagccg tattcctggg ccagcgcatt ggcgatgtcg
     3181 gagaaggtgg cggtgccctt gtcggcggcg accacgagat aggggtcgtc gccgtcgtgg
     3241 cgcacgacat cggccggcgg tttcacgccg ccctcggcat agttgtcggt gatgtcgagc
     3301 aggccgcgga tcagggtttt gtagcaggcg atgccttcgg cctggacctg ctcgcgggtg
     3361 ccgccggacg gtggacgctt gacgtagaag ccgcccttgg aaccgaccgg cacgatgacg
     3421 gcgttcttca ccatctgggt cttcatcagg cccaggatct cggtgcggaa atcctccggc
     3481 cggtcggacc agcggatgcc gccgcgcgcc acccggccgc cgcgcagatg gatgccctcc
     3541 atgcgcgggc tgtagacgaa gatctcgacc atcggccggg gcgccggcaa ctcgtcgatg
     3601 gcgcgactgt cgatcttgaa ggagatccac tccttggacg cgccctctgg cccggtctgc
     3661 cagtagttcg tgcgcaagga ggagcgcagt gcattgagga agcgccgcag gatgcggtcc
     3721 tcgtcgagcg tggtgacgct ctcgagcgcg gcggcgagcg tggtgtcgat ggcctcgatc
     3781 ctcgccttgc gtgcggccga cgcggcatcg cccagcgcgg gatcgaaacg cgcccggaaa
     3841 aggtcggcca tcgcgcgggc gatcgccgga tagagacaga gcgcgcgctc catataggcc
     3901 tggctgaagg cgatgccggt ctggcgcaga tacttggcgt aggcgcgcag gatcgccacc
     3961 tcgcgccagg cgagtcccgc gcccagcacc aggcgattga gaccgtcatt ctccagcgcg
     4021 cccacccaca ggcgatcgag ggtttcggca agacgcggtc cggcagccgc caggtcgacc
     4081 gccgacttgt ccatggtctc gacgctcagc acctgcagcg cgaccgcgtc atctcctggg
     4141 ccgccggccg gagcgcccag cacgaatggc gcttcgctca ggacgcgcag tccgagattt
     4201 tccaaaagcg gcaggatgtc ggagagcgcg atcggctcgc gcggatggaa cagccgcagg
     4261 gtgaagcgat gggccggcag gccgggctcg cggtcgaggc gtacgccgag cggtcggccg
     4321 ctcagcgcgg cctgcagcag ggcgagatcg gccaccgcct ggccggcgtc gaaactgtcg
     4381 cgatagatcg aggggaacca gtcgcgccag cggcgggcgg cggcgcggcc ctcgacttcg
     4441 ccaaggctcg cctgcagggc gatgcgaaag cgatcgctcc acgaggtcgc ggcgtcggcc
     4501 agcgc
//
LOCUS       DASWGA010000535         6750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_575240, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000535 DASWGA010000000
VERSION     DASWGA010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6750
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_575240"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..1016)
                     /locus_tag="VF991_12660"
     CDS             complement(12..1016)
                     /locus_tag="VF991_12660"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEX9557343.1"
                     /translation="MGFTLKNVLLVLSVSLLSLFALEALTRLVLDDGMLYELEMWKYA
                     REVKVRDPRPELGHRHRPNAEARLMGVTLRTNSLGFRSPEIGEKTGDGTARIAFVGDS
                     IALGWGVAEPESFAHQVVAALRAAGYKVDSFNLGVGNYNTSQELALFREFGARLRPDI
                     IVLCYFINDAEPMPDYPASGWLDEHSAAWVVFRYRLDSLFRQFGEAPDWKHYYRALYD
                     PNAEGWKRTRTALSGFADTARALGAELVVFNIPELRELRPYPFADITAEVRKVVEQQG
                     VSFVDLLPSVEKLEPSRLWVTVPDPHPNGRANSAFARLMVPEIAARLDRLCHKQRKDC
                     "
     gene            1197..2156
                     /locus_tag="VF991_12665"
     CDS             1197..2156
                     /locus_tag="VF991_12665"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9557344.1"
                     /translation="MPRLGYLLPTRERIMAGQPETAPLLALAERAEALGFDSVWVGDS
                     LLARPRHDPLTLLAAVAARTRRVELGTAVLLPALRNPVVLAHQVATLDRLAEGRLILG
                     VGIATDVPNIRAEFEAAGVPFDKRVGRLVEGLALARALWRGEPVDWPKDGSKNREGRW
                     TVKSGVIGPTPHRPGGPPIWIAGSVTPALRRAGRLFDGWFPNGPTAAAYGAQWAEVQD
                     AARGAGRDPAALTPAMYLTLAIDDDKARAEARIDAYLEQYYGVRPDVTRKRQMCFAGP
                     AGAAATWLKAYADAGARHLVLRFDGDHERQLETVARLRGELGW"
     gene            2221..3441
                     /locus_tag="VF991_12670"
     CDS             2221..3441
                     /locus_tag="VF991_12670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557345.1"
                     /translation="MTTSRRAFLGGASAAAIATASRASFGQKKYDDGASDSEIKIGHT
                     CPYSGPASAYGVNGKAIVAFWDMINDKGGISGRRIKFISLDDGYSPPKTVECIRQLVE
                     QEKVLCTQNTLGTACNTAIHKYMNQKKVPQLYVATGASKWGNPKDFPWTMGFTPDYHT
                     EGVIYAKHILSTVKDAKIAVLMQNDDYGKDYWEGFKEGLGKEAGRVVKHVTFEITDPT
                     VDSQIIQLKASGANTFFNIATPKFAAQAMRKAADIGWQPVHYVNNVSASVGTVMKPAG
                     FDNVQGIITAAYLMDPTDPTWAEHDDMKAFKAWLAKYHPTAHLADLGNVSGYTVSFMM
                     AETLRRCGDELTRANVMKQAASFQKFRVPMLLPGITVSTSPTDYYPIQAVQLQRFKGQ
                     TWELFGEILHAESS"
     gene            complement(3534..5075)
                     /locus_tag="VF991_12675"
     CDS             complement(3534..5075)
                     /locus_tag="VF991_12675"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX9557346.1"
                     /translation="MTSSTITDIPLPVAPAAGFSLGRRVVILVMVVMGSTLYSTTLLI
                     ASTLLPQMQGTMSATQDEIAWAMTFNILATAVATPMTGWLAARFGRRATMVWSVLAFT
                     VTTFLCGSADSLEALILWRVLQGALGAPVIPLSQTILLDAFPKRQQGLVTSIFGMAVV
                     IGPVIGPTVGGMLAEIYSWRWAFYMIVPVGLMSFVGLRFTLPADRPTGRTSLDWTGFV
                     SLSVAIACVQLVLSRGQRLDWFESGEIIVETFVAALAFWVFIAHSLTATRPFLNLRLL
                     LDRNYALGLVLVLIYGMLNFTPMVLLPPLLQQHAGFPDALIGEIIAARGVGAAIGFFL
                     AIFIGRMDPRVGLIGGFALQTISGVWLMGIDLNVDTGTLMANSLVQGIAIGVIWVPLT
                     LATFSNISSANLAEATAVYHLLRNIGSSFFISICVAEIVRATSANYSRLVELVNPFNR
                     TLALPWVTGGWDTETVGGLAKLSKEIGRQAAMLGYINAFGFYTLCSALAIPLILFVGR
                     RVRVR"
     gene            5124..5570
                     /locus_tag="VF991_12680"
     CDS             5124..5570
                     /locus_tag="VF991_12680"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX9557347.1"
                     /translation="MGPEDDGYIGYMLSDVARLMRTVFDRRMRDLGLTRGQWLVLTRL
                     YRRPGSSQTELADMLEIDRASAGRMIDRMEKGGWVERRADAGDRRINRLHLTGEARKV
                     HADMWAIAEATVDDALSPLSADERARYTELTAKVKGKLQSLAGGLP"
     gene            5567..6646
                     /locus_tag="VF991_12685"
     CDS             5567..6646
                     /locus_tag="VF991_12685"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX9557348.1"
                     /translation="MSRRGQTGLRLVLLVAVPLVAIAGGLFWWLSGGRYVSTDNAYVK
                     AHIVQIAPEISGQVRRVPVHDHATVAAGETLFTIEARPFRLALDSAEAELDAARSQVE
                     TLRGTWREAVSELADAEARAAYFLRQSQRQEELAIKGVASVSKRDESLNDARAAADRV
                     TTVREKLQRVLTALNGDPQLPADQHPKVRDKTAARERAALDLARTTVRAPVDGVVVNL
                     RLQQGEQVKASTPLFALVVVSRPWVEANFKETELTYVRVGQKATVVLDTYPDTTWEAV
                     VESLSPATGAEFAILPPQNASGNWVKVVQRLPVKLRLLPQVGEPPIRAGMTATVKIDT
                     GRQRSVASVAQALGGHGTEAMARTE"
BASE COUNT         1243 a         2162 c         2345 g         1000 t
ORIGIN      
        1 tggagcgtcc atcagcagtc cttgcgttgc ttgtggcaca gcctgtcgag gcgggcggca
       61 atctccggaa ccatgagccg ggcgaaggcg gagttagccc tgccgttggg atggggatcg
      121 ggaacggtca cccacagcct cgacggttcg agcttctcga ccgagggcag caggtcgaca
      181 aaggacacgc cctgctgttc gacgaccttg cgcacctcgg ccgtgatgtc ggcaaatgga
      241 tagggcctga gctcgcgcag ctcggggatg ttgaagacca ccagctccgc gccgagcgcg
      301 cgcgccgtgt ccgcgaagcc ggaaagagcc gtccttgtgc gtttccatcc ctcggcattc
      361 ggatcgtaga gtgcgcggta atagtgcttc cagtcgggcg cctcgccgaa ctggcgaaac
      421 aacgaatcga gcctgtagcg aaagaccacc caggccgccg aatgttcgtc cagccagccg
      481 ctggccggat aatccggcat cggttcggcg tcgttgatga agtagcacag cacgatgatg
      541 tcgggcctca ggcgcgcacc gaactcgcgg aacagcgcca attcctgcga ggtgttgtag
      601 ttgccgacgc cgagattgaa gctgtcgacc ttgtagcctg ccgcgcgcag cgccgcgacg
      661 acttgatggg cgaagctctc cggttcggcc acgccccagc cgagcgcgat cgaatcgccg
      721 acaaaggcga tgcgggccgt gccatcgccg gtcttctcgc caatctcagg cgagcggaag
      781 cccagcgagt tggtgcggag cgtcacgccc atcagccggg cctcggcatt ggggcggtgg
      841 cgatggccga gttcggggcg cggatcgcgg accttgacct cgcgggcata cttccacatt
      901 tcgagttcgt agagcatgcc gtcgtcgaga acgaggcgag tcagggcttc cagggcgaac
      961 agggaaagca gcgagacgct cagaaccagc aggacgttct ttagcgtgaa tcccatcgaa
     1021 actactcggc gatcgcggct ggccacgcgg tgatattgga atgagacgtt cgccttgtgc
     1081 aaggtctgcg tggatggcga cggtattgtc atcccgagcg tagcgaggga cctttgctca
     1141 tggccttaaa gctccctcgg ccttcggcct cgggatgaca ccattggaga tcatcaatgc
     1201 cgcgactggg atacctgctg ccgacccgcg agcggatcat ggcgggccag cctgaaaccg
     1261 cgccgctcct ggcgctggcc gagcgcgccg aggcgctggg cttcgactcc gtctgggtcg
     1321 gtgattccct gctggcgcgg ccgcggcacg atccgctgac cctgctggcc gcggtggccg
     1381 cgcggacccg gcgggtcgag ctcggcacgg cagtgttgct gcccgccctg cgcaacccgg
     1441 tggtgctggc ccatcaggtc gcgacgctcg accgcctcgc cgagggtcgg ctgatcctgg
     1501 gcgtcggcat cgccaccgac gtgcccaata tccgcgccga attcgaggcg gcgggcgtgc
     1561 cgttcgacaa gcgggtcggc cggctggtcg agggcctggc gctggcccgt gcgctgtggc
     1621 gcggcgagcc ggtggactgg ccaaaggacg gatccaagaa tcgggaagga cggtggacgg
     1681 tcaagtcggg cgtgatcggc ccgacgccgc accggccagg cggcccgccg atctggatcg
     1741 cgggctcggt tacgccggcg ctgcggcggg ccgggcggct gttcgacggc tggtttccca
     1801 acggaccgac cgccgcggca tacggcgcgc aatgggcgga ggtgcaggac gccgcccgcg
     1861 gcgccggacg cgatcccgcc gcgctcacgc ccgcgatgta tctcacgctt gcgatcgacg
     1921 acgacaaagc ccgcgccgag gccaggatcg acgcctatct cgagcagtat tacggcgtgc
     1981 gcccggacgt cacgcgcaaa cggcagatgt gctttgccgg ccctgccggc gcggcggcga
     2041 cgtggctgaa agcctatgcc gacgccggcg cccgccatct ggtgctgcgc tttgacggcg
     2101 accatgagcg ccaactcgag acagtggcgc ggctgcgcgg cgagctggga tggtagcgca
     2161 caaggtctcg ctgtaggctt tgcgtgcagg aaccacagag ttccggtttt gggaggaaag
     2221 atgacgacca gtaggcgtgc attcctgggc ggtgcgtcgg ccgccgcgat cgcgacggcg
     2281 tcgcgcgcat cgttcggcca gaagaaatac gacgacggcg ccagcgacag cgagatcaag
     2341 atcggccaca cctgtcccta tagcggaccg gcttcggctt acggcgtgaa cggcaaggcg
     2401 atcgtggctt tctgggacat gatcaacgac aaaggcggca tcagcggccg caggatcaag
     2461 ttcatcagcc tcgacgacgg ctactcgccg cccaagacgg tggaatgcat ccgccaactc
     2521 gtcgagcagg agaaggtgct gtgcacccaa aacacgctgg gtacggcgtg caatacggcg
     2581 atccacaaat acatgaacca gaagaaggtg ccgcagctct atgtcgcgac cggcgcctcg
     2641 aagtggggca accccaagga cttcccctgg accatgggct ttacgcccga ctaccacacc
     2701 gaaggcgtca tctacgccaa gcacatcctg tcgacggtca aggacgccaa gatcgccgtg
     2761 ctgatgcaga acgacgacta cggcaaggac tattgggaag gtttcaagga gggcctcggc
     2821 aaggaggccg gccgggtcgt caagcacgtc accttcgaga tcaccgatcc gacggtcgat
     2881 tcgcagatca tccagctcaa ggcgagcggc gccaacacct tcttcaatat cgccacgccc
     2941 aagttcgccg cccaggcgat gcgcaaggcg gccgatatcg gctggcagcc ggtgcattac
     3001 gtcaacaatg tctcggcgag cgtcggcacg gtgatgaagc cggcgggctt cgacaacgtg
     3061 cagggcatca tcaccgcggc ctacctcatg gacccgaccg atccgacctg ggctgagcac
     3121 gacgacatga aggccttcaa ggcctggctg gccaagtacc atccgacggc gcacctcgcc
     3181 gacctcggca acgtcagcgg ctacaccgtg tcgttcatga tggccgagac gctgcgccgt
     3241 tgcggcgatg agctgacgcg cgccaacgtc atgaaacagg cggcgagctt ccagaagttc
     3301 cgcgtgccga tgctgctgcc cggcatcacc gtctcgacca gcccgaccga ctactatccg
     3361 atccaggccg tccagctgca gcgcttcaag ggccagacct gggaactgtt cggcgagatc
     3421 ctgcacgccg agagttcgtg aagataaagg tcgctcggcc tgcggcctcg ggatgacagg
     3481 tggtgtggat gacaggcccg ctgtcatccc gagcgcagcg agggaccttt atcctaccgc
     3541 accctgacgc ggcggccgac gaagaggatg agggggatcg cgagcgccga gcacagtgtg
     3601 tagaagccga aggcgttgat gtagcccagc atcgccgcct gccggccgat ctccttcgag
     3661 agcttggcca gcccgccgac cgtctcggtg tcccacccgc cggtgaccca cgggagcgcg
     3721 agggtgcggt tgaaggggtt caccagctcg accagccggc tgtagttggc gctggtcgcg
     3781 cgcacgatct cggcgacgca gatcgagatg aagaagctcg agccgatgtt gcgcaacaga
     3841 tgatagacgg ccgtcgcctc ggcgagattg gccgagctga tgttggagaa ggtggcgagc
     3901 gtcagcggca cccagatgac gccgatggcg atgccctgca ccaggctgtt ggccatcagg
     3961 gtgccggtat cgacattgag gtcgatgccc atcagccaga cgccggagat cgtctgcagc
     4021 gcgaagccgc cgatcagccc gacccgggga tccatgcggc cgatgaagat tgcgagaaag
     4081 aagccgatcg cggcgccgac gccgcgcgcg gcgatgattt cgccgatcag ggcgtcggga
     4141 aacccggcgt gctgctgcaa gagcggcggc agcagcacca tgggcgtgaa gttgagcatg
     4201 ccgtagatca ggaccagcac caggcccagg gcatagttgc ggtcgagcag caggcggaga
     4261 ttgagaaacg gccgcgtggc ggtgaggctg tgggcgatga agacccagaa ggccagcgcc
     4321 gccacgaacg tctcgacgat gatctcgccc gactcgaacc agtcgagccg ctggccgcgc
     4381 gacagcacga gctgaacgca ggcgatggcg acggagagcg agacgaagcc cgtccagtcg
     4441 agcgaggtgc gtccggtcgg ccggtccgcc ggcagcgtga atcgcaggcc gacgaaggac
     4501 atcagcccga ccggcacgat catgtaaaag gcccagcgcc agctatagat ctccgccagc
     4561 atgccgccca cggtggggcc gatcaccggg ccgatgacga cggccatgcc gaagatcgag
     4621 gtcaccagcc cctgctggcg cttggggaag gcgtcgagca ggatggtctg cgacagcggg
     4681 atgaccggcg cccccagcgc accctgcagc acgcgccaca ggatcagggc ttccagcgaa
     4741 tcggccgagc cgcacaggaa ggtcgtgacg gtgaaggcca gcaccgacca caccatggtc
     4801 gcgcgccgcc cgaagcgcgc cgccagccag ccggtcatgg gcgtcgccac cgcggtcgcc
     4861 aggatgttga aggtcatcgc ccaggcgatc tcgtcctggg tggccgacat ggtgccctgc
     4921 atctgcggca gcagcgtcga ggcaatcagc agggtggtgg agtagagggt cgagcccatc
     4981 accaccatga cgagaatcac cacccgccgg ccgagcgaga aacccgccgc cggggcgaca
     5041 gggagcggaa tgtcggtgat ggtgcttgaa gtcatagcca agactattgt agcctaggca
     5101 acaatagcga gccaacctcc caaatgggcc ctgaagacga cggatatatc ggctacatgc
     5161 tgtcggacgt ggcgcgtctg atgcgcaccg tgttcgaccg gcgcatgcgc gacctcggcc
     5221 tgacccgcgg ccagtggctg gtgctgacgc ggttgtaccg ccggccgggg tcgagccaga
     5281 ccgagctggc cgatatgctc gagatcgacc gggccagcgc cggccgcatg atcgaccgca
     5341 tggaaaaggg cggctgggtc gagcggcgcg ccgatgccgg cgaccgccgc atcaaccggc
     5401 tccatctcac gggcgaggcg cgcaaggtgc acgccgacat gtgggcgatc gccgaagcca
     5461 cggtcgacga tgcgctgtcg ccgctgtcgg ccgatgagcg cgcccggtac acggagttga
     5521 cggccaaggt taagggcaag ctccagagcc tggccggggg actcccatga gccggcgcgg
     5581 acagaccggc ctgcgcctgg tgctcctggt ggcggtgccg ctggtggcga tcgccggcgg
     5641 ccttttctgg tggctgtccg gcggccgcta tgtcagcacc gacaacgctt acgtgaaggc
     5701 gcacatcgtg cagatcgcgc cggagatctc cggccaggtt cgccgcgtgc cggtccacga
     5761 tcacgccacg gtcgccgccg gcgaaacgct gttcaccatc gaagcgcggc cgttccggct
     5821 ggcgctcgac agcgccgagg ccgagctgga cgcggcgcgc agccaggtcg aaaccctgcg
     5881 cggcacctgg cgcgaggcgg tgagcgagct ggccgacgcc gaggcgcgcg ccgcttattt
     5941 cctgcgccag tcgcaacgcc aggaggagct ggcgatcaag ggtgtggcct cggtgagcaa
     6001 gcgcgacgaa tcgctaaacg atgcgcgcgc cgctgccgac cgggtgacga cggtgcgcga
     6061 gaagctgcag cgcgttctga cggcgctgaa cggcgatccg caattgccgg ccgaccagca
     6121 tcccaaggtg cgcgacaaga ccgccgcgcg cgagcgcgcc gcgctcgacc tggcgcggac
     6181 cacggtgcgc gccccggtcg acggcgtggt ggtgaatttg cgcctgcagc agggcgagca
     6241 ggtcaaggcg tcgacgccgc tgttcgcgct ggtcgtggtg agccgtccct gggtcgaggc
     6301 caatttcaag gagaccgagc tcacctatgt gcgggtcggc cagaaggcca cagtggtgct
     6361 cgacacctat cccgacacga cctgggaggc ggtggtcgaa agcctgagcc cggcgaccgg
     6421 cgcggagttc gccatcctgc cgccgcagaa cgccagcggg aactgggtca aggtcgtgca
     6481 gcgcctgccg gtgaagctcc ggctcctgcc gcaggtcggc gagccaccga tccgcgccgg
     6541 catgaccgcg acagtgaaga tcgataccgg ccgccagcgc agcgtcgcct cggtggcgca
     6601 ggccttggga ggccacggca ccgaggcgat ggcgcggacg gagtagggtg gaggcagcct
     6661 tttgtaaccc gcttgcgtcg atgacaaaaa tgctgtcatc ccgagcgtag cgagggtgtg
     6721 gattcacatt tgaagtgcaa cagttgggaa
//
LOCUS       DASWGA010000536         3872 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2336709, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000536 DASWGA010000000
VERSION     DASWGA010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3872
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2336709"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VF991_12690"
     CDS             complement(<1..791)
                     /locus_tag="VF991_12690"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEX9557349.1"
                     /translation="MSQTAHKFDPSILREYDIRGIVGGTVHPADARAIGRTFGTMVRR
                     KGGKHVALGYDGRLSSPELAAACIEGLTSAGVDVTNIGLVATPMLYFAVYHLDADGGI
                     MITGSHNPPDYNGFKMMMGKKSFFGADIQTLGAMAGKADWEAGQGKTAKKDILADYAA
                     RLLKDVKPGKKLKVAWDTGNGAVGVSIRAVVDKLPGEHVVLNEKVDGTFPSHHPDPTV
                     PKNLEQLMSEVKKRGCDLGIAFDGDGDRIGALDGRGRILWGDQLLV"
     gene            complement(819..2135)
                     /locus_tag="VF991_12695"
     CDS             complement(819..2135)
                     /locus_tag="VF991_12695"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEX9557350.1"
                     /translation="MRIAMIGAGYVGLVSGACFAQFGHDVVCIDKDAARIARLNKGEI
                     PIYEPGLDKLVADNERAGRLSFGLDLDEAVGNADAVFIAVGTPTRRGDGHADLSYVYA
                     AAAEIADAIRGYTVVVTKSTVPVGTGREVARIIRETRPAAEFDVCSNPEFLREGAAIE
                     DFMKPDRVVIGVETQRARDVMTAVYRPLNLIQTPMVFTNIETAEVTKYAGNAFLATKI
                     TFINEIADLCEKVGADVHDVARGIGLDGRIGRKFLHPGPGFGGSCFPKDTLALAYTAR
                     EANTPQTIVEQVIEVNNSRKRKMAHKVIEFCGGSVAGLTVGVLGLTFKANTDDMRDAP
                     SLDIVPALQAAGARIVAFDPEGMKEAARMLPGIAFAKTAYEAATGADVLVVITEWHEF
                     RGLDPRRLKEAMRKPRIIDLRNIFNPEEMRGLGFAYEGIGRPRPRD"
     gene            complement(2139..3014)
                     /gene="galU"
                     /locus_tag="VF991_12700"
     CDS             complement(2139..3014)
                     /gene="galU"
                     /locus_tag="VF991_12700"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEX9557351.1"
                     /translation="MAQRVRKAVLPVAGLGTRFLPATKAMPKEMLTVVDRPLIQYAVE
                     ECLAAGIEEFIFVTGRNKSALEDHFDAAFELEAMLEQRGKVRELKQTQGATIKAGNAV
                     FTRQQKPLGLGHAVWCAREWIGREPFAVLLPDELMIGSPTCTAQLVAAHDKTGGNVIA
                     VMDVPREQTRSYGIAAVKAEKDGLAEVTGLIEKPKPEQAPSTLAWIGRCVLLPDVFRY
                     LDHHEAGSGGEIQLTDAMAKMIGSNPFHALRYVGRRYDCGSRIGFLEANLAVALHRAD
                     TAAETRALLDRLLKG"
     gene            complement(3133..3843)
                     /locus_tag="VF991_12705"
     CDS             complement(3133..3843)
                     /locus_tag="VF991_12705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEX9557352.1"
                     /translation="MPALLLLALVLLAVVAFAIAWFLRANPSTVARLLRPALVVLGGI
                     GVGGLLIFGLRFVPQLLPELFGLAGVVIAALIARAVRRRPSGGFSSPGSAQRTEVHTA
                     FLQAWIDHGTGDVGGTVLSGRFAGRTLDGLGDGDLLDLHAECSSDADSLRILEAYLDR
                     RLGSDWRNARRPPPSGPRSDMTRDEALAVLGLAEGASADEIRAAHRRLIQRMHPDVGG
                     SADLAARINRAKDVLLGG"
BASE COUNT          633 a         1288 c         1311 g          640 t
ORIGIN      
        1 accaggagct ggtcgcccca caggatgcgg ccccttccat cgagcgcacc gatgcggtcg
       61 ccgtcgccgt cgaaggcgat gccgaggtcg caaccgcgct tcttcacttc ggacatgagc
      121 tgttcgaggt tcttcggaac cgtcggatcg ggatggtgtg acgggaaggt gccgtcgacc
      181 ttctcgttca gcacgacatg ctcgcccggc agcttgtcga cgacggcacg gatcgacacg
      241 ccgaccgcgc cattgccggt gtcccacgcc accttgagtt tcttgccggg cttgacgtcc
      301 ttcagaaggc gcgcggcgta gtcggccagg atgtccttct tcgcggtctt gccctgcccg
      361 gcctcccaat cggccttgcc cgccatggcg cccaaggtct ggatgtcggc gccgaagaac
      421 gacttcttgc ccatcatcat cttgaagccg ttgtagtcgg gcggattgtg cgagccggtg
      481 atcatgatcc cgccgtcggc gtcgagatga tagacggcga aatagagcat cggcgtcgcc
      541 accaggccga tattcgtgac gtcgacgccg gccgacgtta gtccctcgat gcaggcggcc
      601 gccagctcgg gcgaactcag ccggccgtca tagcccaagg ccacgtgctt cccgcccttg
      661 cggcggacca tcgtgccgaa ggtgcggccg atggcgcgtg cgtcggccgg atgtaccgtg
      721 ccgccgacga tgccgcgaat gtcgtattcg cgcaggatgg agggatcgaa cttgtgcgcc
      781 gtctggctca tgcaaacgct ccggataggc gtgaaatgtc agtcgcgtgg ccggggacgg
      841 ccgatcccct cgtaggcgaa acccaggcca cgcatttcct cgggattgaa aatgttgcgc
      901 aggtcgatga tccgcggctt gcgcatcgcc tccttcagtc gccgcgggtc gaggccgcgg
      961 aattcgtgcc actcggtgat gacgaccagc acatcggcgc cggtcgccgc ctcgtaggcg
     1021 gtcttggcga aggcgatgcc gggcagcatg cgggccgcct ccttcatgcc ctcgggatcg
     1081 aacgccacga tcctcgcccc ggctgcctgc agggccggca cgatgtcgag cgagggcgcg
     1141 tcgcgcatgt cgtcggtgtt ggccttgaag gtgagcccca gcacgccgac cgtgaggccg
     1201 gccaccgagc cgccgcagaa ctcgatcacc ttgtgggcca tcttcctctt gcgcgagttg
     1261 ttgacctcga tcacctgctc gacgatcgtc tgcggcgtgt tggcctcgcg cgcggtgtag
     1321 gcgagcgcca gcgtgtcctt gggaaagcac gagccgccga agcctggccc gggatgcagg
     1381 aacttgcggc cgatgcggcc atccagcccg atgccgcgcg ccacgtcatg gacgtcggca
     1441 ccgaccttct cgcagaggtc ggcgatctcg ttgatgaagg tgatcttggt ggcgaggaag
     1501 gcgttgccgg cgtacttggt gacctcggcc gtctcgatgt tggtgaacac catcggcgtc
     1561 tggatgaggt tgagcggccg gtagacggcg gtcatcacgt cgcgcgcccg ctgtgtctcg
     1621 acgccgatca cgacccggtc gggcttcatg aaatcctcga tcgccgcgcc ctcgcgcagg
     1681 aactccggat tcgagcagac gtcgaactcg gccgccggcc gggtctcgcg gatgatgcgc
     1741 gccacctcgc ggccggtgcc gaccggcacc gtcgacttgg tcaccaccac cgtgtagccg
     1801 cggatcgcgt cggcgatttc ggcggccgcg gcgtagacgt agctcaggtc ggcatggcca
     1861 tcgccgcgcc gggtcggcgt gccgacggcg atgaacaccg cgtcggcatt gcccaccgcc
     1921 tcgtcgaggt cgaggccgaa ggaaagccgc ccggcgcgct cgttgtcggc gaccagcttg
     1981 tcgaggccgg gctcatagat cgggatctcg cccttgttca ggcgggcgat cctggcggca
     2041 tccttgtcga tgcagacgac gtcgtggccg aactgggcaa agcaagcgcc ggagacgagt
     2101 ccgacatagc ccgcaccgat catggcaatg cgcatcggtc agcctttcag caggcggtcg
     2161 agcagggcgc gcgtttcggc tgccgtatcg gcgcgatgga gcgcgaccgc gaggttggcc
     2221 tcgagaaatc cgatgcggct gccgcagtcg tagcgccggc cgacatagcg caaagcatgg
     2281 aacgggttgc tgccgatcat cttggccatg gcgtcggtga gctggatctc gccaccggag
     2341 ccggcctcat ggtggtcgag ataacgaaat acatcaggca gcaacacaca gcggccgatc
     2401 caggcgagcg tcgagggtgc ttgttcgggc ttgggcttct cgatcaggcc ggtgacctcg
     2461 gccaagccgt ccttctccgc cttcacggcg gcgatgccat agctcctggt ctgctcgcgc
     2521 ggcacgtcca tcacggcgat cacgttgccg ccggtcttgt catgggcggc aacgagctgg
     2581 gcggtgcagg tcggtgagcc gatcatgagt tcgtcgggca gcagcacggc gaacggttcg
     2641 cgtccgatcc attcgcgggc gcaccacacg gcatggccca ggcccaacgg cttctgctga
     2701 cgggtgaaca ccgcgttgcc cgccttgatg gtggcgccct gggtctgctt cagctcgcgc
     2761 accttgccgc gctgctcaag catcgcctcc aattcgaagg ccgcatcgaa atggtcctcc
     2821 agggcgctct tgttgcgccc ggtgacgaaa atgaactcct cgatgccggc cgccaggcat
     2881 tcctcgacgg cgtactggat caacggccgg tcgacgaccg tcagcatctc cttgggcatc
     2941 gccttggtcg cgggcaggaa acgggtgccc aatccggcca ccggcaaaac cgccttacgg
     3001 acgcgctgcg ccatgctcat cgacctcgct caacgggtgg attgtatgga catatcaatg
     3061 atttgacagc gatttgccga tgacaaccca agggcggcgc tagatgccat ggcaatgccg
     3121 gggctggcaa ggttagccgc caagcagcac gtccttggcc cgattgatgc gggccgccag
     3181 atcggcgctg ccgccgacat cgggatgcat gcgctggatc aggcgccgat gggcggcgcg
     3241 gatctcgtcg gcgctggcgc cctcggcgag acccaacacc gcgagcgcct cgtcccgcgt
     3301 catgtcgctg cgcggcccgc tgggcggcgg ccggcgggca ttgcgccagt cgctgcccag
     3361 acgccggtcg agataggctt ccaggatcct gagcgaatcg gcgtcgctcg aacactcggc
     3421 gtgcagatcg agcagatcgc cgtcgcccag gccgtcgagc gtgcgaccgg cgaagcgacc
     3481 ggacagcacg gtgccgccga catcgccggt gccgtgatcg atccacgcct gcaggaaggc
     3541 ggtatgaact tcggtacgct gggcgctacc cggcgaactg aacccgcccg acggccgacg
     3601 ccgcaccgcg cgggcgatca gggcggcgat caccaccccg gccagcccga acagctcggg
     3661 cagtagttga ggcacgaaac gcaggccgaa aatcagcaac ccaccgacgc cgatgccgcc
     3721 cagcacgacc aaggccggcc gcagcaggcg ggccactgtc gaggggttgg cgcgcaagaa
     3781 ccaggcgatg gcaaaggcga cgaccgccag caggacgagg gccaggagaa ggagcgccgg
     3841 catggttcac cgccgcgccg gcggcggcgg cg
//
LOCUS       DASWGA010000537         4689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1073840, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000537 DASWGA010000000
VERSION     DASWGA010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4689
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1073840"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2102)
                     /locus_tag="VF991_12710"
     CDS             complement(<1..2102)
                     /locus_tag="VF991_12710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014531856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9557353.1"
                     /translation="MSTAAPAAPVRPTRFGLAAKLFAILILLGAVAVLITGVLGYVRA
                     RDALERTIFNQLTAARETKSRQVEIYFRGIRNDMRLLAASKMVVEAMRGLRDAVDELD
                     AKPVPAEVRERVHGWYDKQYMPMVRRLLGPATSVKEFLPVGSAPYFLQDWYIVDNPQP
                     ADRRKLVDDAGDGSSYSRLHAIYHPLMRTAAATLHFDDFMMADPKTGRIIYSVEKEAD
                     FGTSLQAGPYRRSNVAAAVGRCAAAPDPSATCLEDFADYLPADGKPTAFMAAPVIEHG
                     VVIGVLVAQLSIDEIDSIVTGGKRWQHEGFGATGEAYLVGPDFLARSGPRAFYENREQ
                     YFAELPGGGATDKQVENIRRFGTPILHQPADTKATRAAIGGVEGTGEIVGYRGIPTLA
                     SWGPVRVSGVKWALIAKIDSSEAFAPIRQLERDLMIVGAIALLVVIVTGAWLSRALLG
                     PLRELTAGVRRFAAGDTGAHVPVRTRDEIGQLCLAFNGMIDEISEKNVVIENKNRENE
                     ELLLNVLPAPIANRLRGGEQSIADGFAEVTVAFADIVGFTAMSSDMPPANVVSLLNGL
                     FTRFDDAAHELGIEKIKTVGDAYMAVCGMPVQVPDHAERMVRMAIRMVHITREHAMEH
                     HVEMKLRVGINSGPVVAGVIGKSKYIYDLWGDTVNLASRMESGGMPDTIQVTRPVYEK
                     LKDKFVFESRGTIEVKGKG"
     gene            2223..3047
                     /locus_tag="VF991_12715"
     CDS             2223..3047
                     /locus_tag="VF991_12715"
                     /inference="COORDINATES: protein motif:HMM:NF018066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate decarboxylase family protein"
                     /protein_id="HEX9557354.1"
                     /translation="MAAPRLATWVIVALAIVGCGSAAAQERLQPGAGFFDVAALDDPA
                     FGRCAWMARTGPFVFQESDYIRGYFEPTNLAAYQQALPRPFAMPARPLIRIAFLDFYD
                     MAQGPTYLETEVAILGMDGAQPGWVVLTLPVTNGPACIGGRDLFGLAKVIRRITFVRA
                     ADRYVGTLYARGAEKVDFTLTVAIGDPGAAAREFLRQYGVYPQFGLLNGKVLRFGGSG
                     TSFADLAARGDYQIKLGTARLDVSPDPNSLVNRLGIGAPLAAHWSRVRAKYSIKPL"
     gene            complement(3056..3802)
                     /locus_tag="VF991_12720"
     CDS             complement(3056..3802)
                     /locus_tag="VF991_12720"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX9557355.1"
                     /translation="MPDAAIQPTDDQLFAELRKIDTPTITNVVATYPKNPLCLGLYNP
                     WTENWYTDTSIRCLYPEMGPVVGYAVTCVYGLPDPSFAGRLSFMDVVDALDAMKKPTI
                     LVIQQKWPTELMAKAGLAGEMMVSSMMAVGCVGMLSNGPSRDIDAIRKLRFQLLLGGV
                     TAGHGEMAVQAVNVPVSVGGMDVAPGDLVHMDENGAVKFPPVHAPAVIKNAQAMLDDE
                     ARRLVLLRKARTAAEVRAASSGGAYTPKKG"
     gene            3948..4427
                     /locus_tag="VF991_12725"
     CDS             3948..4427
                     /locus_tag="VF991_12725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557356.1"
                     /translation="MSMPSLPQRSWPVGLLLLAVAGVLYVLMLANATYEPAGGGESRM
                     SAAFEGLFLTLGLWIVLAVMIVAGAVGGTMPGWAGGLAGILVPASGIANFTAVDMLSR
                     HMPWAIVFPILLAPLIAFYAFWARMPQLQARLPAERTSVAVWASIFVLSVATFVLAA"
     gene            complement(4435..>4689)
                     /locus_tag="VF991_12730"
     CDS             complement(4435..>4689)
                     /locus_tag="VF991_12730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ionic transporter y4hA"
                     /protein_id="HEX9557357.1"
                     /translation="LQKSLNLALGSSLATIGLTIPAVSILSLIIDRPLALGLELRDSI
                     TLMLTFAVSLVTFGGGRTNILPGFVHLVLFAIFVFMIFVP"
BASE COUNT          731 a         1566 c         1568 g          824 t
ORIGIN      
        1 cccttgccct tgacctcgat cgtgccgcgc gattcgaaca cgaacttgtc ctttagcttc
       61 tcataaacag ggcgcgtcac ctggatggtg tcgggcatgc cgcccgattc catgcggctc
      121 gccaggttca ccgtgtcgcc ccacaggtcg tagatgtact tgctcttgcc gatcacgccg
      181 gccaccaccg gaccactgtt gatgccgacc cggagcttca tctcgacatg gtgctccatg
      241 gcgtgctcgc gcgtgatgtg gaccatgcgg atcgccatgc gcaccatgcg ctcggcatgg
      301 tcgggcactt gaaccggcat gccgcacacc gccatatagg catcgcccac cgtcttgatc
      361 ttctcgatgc cgagctcgtg ggcggcatcg tcgaagcggg tgaacagccc gttcagcagg
      421 gagacgacgt tggccggcgg catgtcggac gacatggcgg tgaagccgac gatatcggcg
      481 aaggccaccg tcacctcggc gaagccgtcg gcgatgctct gctcgccgcc gcgcaggcga
      541 ttggcgatcg gcgccggcag gacgttcagc aacagctcct cgttctcgcg gttcttgttc
      601 tcgatgacga cgttcttctc gctgatctcg tcgatcatgc cgttgaacgc cagacagagc
      661 tggccgatct cgtcgcgcgt gcgcaccgga acgtgggccc cggtgtcgcc cgccgcgaag
      721 cgccgcacgc cggcggtgag ctcgcgcaat ggccccagca gcgcgcgcga cagccaggcg
      781 ccggtcacga tcacgaccag aagcgcgatc gcgcccacga tcatgaggtc gcgctcgagc
      841 tgacggatcg gggcgaaggc ttccgaagag tcgatcttgg cgatcagcgc ccatttgacg
      901 cccgacaccc gcacgggtcc ccacgaagcg agcgtgggaa tgccgcgata gccgacgatt
      961 tcgccggtgc cctccacgcc gccgatggcg gcgcgcgtcg ccttggtgtc ggcgggctgg
     1021 tgcaggatcg gcgtgccgaa tcggcggatg ttctcgacct gcttgtccgt ggccccgccg
     1081 cccggcagct cggcgaaata ttgctcgcga ttctcgtaga aggcgcgcgg acccgagcgg
     1141 gccaggaagt cggggccgac gagataggcc tcgccggtgg cgccgaagcc ctcgtgctgc
     1201 cagcgcttgc cgccggtcac gatactgtcg atctcgtcga tcgaaagctg cgccaccagc
     1261 acgccgatca ccacgccgtg ctcgatcacc ggcgccgcca tgaaggcggt cggcttgccg
     1321 tcggccggca ggtagtcggc gaaatcctcc aggcaggtcg ccgagggatc gggtgctgcc
     1381 gcgcaacggc cgacggcggc ggcaacgttg gagcgccgat agggcccggc ctgcagcgat
     1441 gtgccgaaat cggcctcctt ttcgacactg tagatgatcc gaccggtctt gggatcggcc
     1501 atcatgaagt cgtcgaagtg cagggtcgcg gcggccgtgc gcatcagcgg atggtagatc
     1561 gcatgcaggc ggctgtagga gctgccgtcg cccgcatcgt cgacgagctt gcgcctgtcc
     1621 gcgggctgcg gattgtcgac gatgtaccag tcctgcagga aatacggcgc cgagccgacc
     1681 ggcaggaact ccttgaccga cgtcgcgggg ccgagcaggc ggcgcaccat cggcatgtac
     1741 tgcttgtcgt accagccgtg gacgcgttca cggacctccg ccggcaccgg cttggcgtcg
     1801 agctcgtcga cggcgtcgcg caagccgcgc atggcctcga ccaccatctt ggaggcggcg
     1861 agcaggcgca tgtcgttgcg gatgccgcgg aagtagatct cgacctggcg gctcttggtc
     1921 tcgcgcgccg cggtaagctg gttgaagatc gtccgctcca gcgcatcgcg ggcgcggacg
     1981 taacccagca cgccggtgat cagcacggcg accgcgccta aaaggatcag gatggcgaac
     2041 agcttggccg ccagcccgaa gcgcgtcggg cggacgggag cggcgggagc ggcggtggac
     2101 atagcgagct tctatatgac tccgccgcgc gttggataga tagggctatc tccccggccg
     2161 cccttgacgg cagggcgaca tcggcgcctt gtcttctacg gccggttgca gagggggact
     2221 gaatggctgc tccgaggctt gcgacctggg tcatcgtcgc gttggctatc gtcggctgcg
     2281 gcagcgccgc ggcgcaggag cgacttcagc cgggtgcggg gttcttcgat gtggcagcgc
     2341 tcgacgaccc ggccttcgga cgctgcgcct ggatggcgcg cacagggccc ttcgtcttcc
     2401 aggagagcga ctatatccgc ggctacttcg agccgaccaa cctcgccgcc tatcagcagg
     2461 cgctgcccag gccgttcgcc atgccggcgc ggccgctgat ccgcatcgcc ttcctcgact
     2521 tttacgatat ggcccagggg ccgacctatc tcgagaccga ggtcgccatc ctgggtatgg
     2581 acggcgcaca gcccggctgg gtcgtgctca ccctgccggt caccaatggg ccggcctgca
     2641 tcggcggccg cgatctgttc ggcctcgcca aggtgatacg gcgcatcacc ttcgtgcgcg
     2701 cggccgaccg ctatgtcggc acgctctacg cgcgcggcgc cgagaaggtc gacttcacgc
     2761 tcaccgtcgc gataggagat ccgggtgccg cggcgcgcga atttctgcgc cagtacggcg
     2821 tctacccgca attcgggctg ctgaacggaa aggtgctgcg gttcggcggc tcgggcacgt
     2881 cgttcgccga cctcgccgcc cgcggcgact accagatcaa gctcggcacg gcgcggctcg
     2941 acgtgtcgcc cgatcccaac agcctggtga accgcctcgg catcggcgcg cctctcgcgg
     3001 cgcactggtc acgcgtgagg gccaagtact cgatcaagcc gctctaggcc cgcggtcacc
     3061 ctttcttcgg cgtgtaggcg ccgcccgacg atgccgcgcg cacctcggcc gcggtcctgg
     3121 ccttgcgcag cagcaccagg cggcgcgcct cgtcgtcgag catggcctgg gcgttcttga
     3181 tgacggcggg cgcgtgcacc ggcgggaatt tcaccgcgcc gttttcgtcc atgtgcacaa
     3241 ggtcgcccgg cgccacgtcc atgccgccga ccgatacagg cacgttgacg gcctgcaccg
     3301 ccatctcgcc gtggcccgcg gtgacaccgc ccagcaggag ctggaagcgc agcttgcgga
     3361 tggcgtcgat gtcgcgcgac gggccattgg acagcatgcc gacgcagccc accgccatca
     3421 tcgagctcac catcatctcg ccagccagac ccgccttggc catcagctcg gtcggccatt
     3481 tctgctggat caccaggatg gtcggcttct tcatggcatc gagcgcgtcg accacgtcca
     3541 tgaaggagag ccggccggcg aagctgggat cgggcaggcc gtagacgcag gtcacggcgt
     3601 agcccaccac cggccccatc tcgggataga ggcagcggat cgaagtgtcg gtgtaccagt
     3661 tctcggtcca cggattgtaa aggccgaggc acagcggatt cttgggatag gtcgccacca
     3721 cgttggtgat ggtgggcgtg tcgatcttgc gcagctcggc gaagagctgg tcgtcggtcg
     3781 gctgtatggc tgcgtcgggc atgctggcga tctctccttt tgcagctttg ttcttcgccc
     3841 aattgacggc cgccgacaag ggatcgcgcc ggcacgccgc tgggcaaaac acgaaacttc
     3901 cggtaaagcc tttgagcagt tcgtgatcga atgggggcgt cgtcgccatg tcaatgccgt
     3961 cactgccgca acgatcctgg cccgtcggcc tgctgctgct ggcggttgcc ggcgtcctct
     4021 acgttctcat gcttgccaac gccacgtacg agcccgcggg cggcggcgag tcgcggatgt
     4081 cggcggcttt cgagggactc ttcctcacgt tgggcctttg gatcgtgctc gccgtcatga
     4141 ttgtcgcggg cgccgttggc ggcacgatgc ccggctgggc cggtggactc gccggcattc
     4201 tcgttcccgc ctccggcatc gccaatttca ccgccgtcga catgctgtcg cgccatatgc
     4261 catgggccat cgtcttcccc atcctgctcg cgcccttgat cgccttctac gccttctggg
     4321 cgcggatgcc gcagcttcag gcccgcctgc cggcggagcg caccagcgtc gctgtgtggg
     4381 cttcgatctt cgttctgtcg gttgccacgt tcgtgctggc tgcctgaaca gctctcacgg
     4441 aacgaaaatc atgaagacga agatcgcgaa cagcacgaga tgcacgaagc ccggcaggat
     4501 attcgtgcgc ccgccgccga aggtgacgag gctgacagcg aaggtgagca tcagggtgat
     4561 ggaatcgcgc agctcgaggc cgagcgccag ggggcggtcg atgatcaacg acaggatgct
     4621 gacggccggg atggtaagtc cgatggtcgc cagcgatgag cccagcgcca ggttcaggct
     4681 cttctgaag
//
LOCUS       DASWGA010000538         3706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_943847, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000538 DASWGA010000000
VERSION     DASWGA010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3706
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_943847"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="VF991_12735"
     CDS             <1..233
                     /locus_tag="VF991_12735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557358.1"
                     /translation="ADNVPSFKLGNKVTPCPHNPLGVKGCGEAGAIAAPAAVMNAVRD
                     ALAPLGVKHVEMPATPLNVWQSIQGAQHAAAE"
     gene            249..1046
                     /locus_tag="VF991_12740"
     CDS             249..1046
                     /locus_tag="VF991_12740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019858600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX9557359.1"
                     /translation="MYDFAYHRPKSLADAVGLLKSKPEARAMSGGMTLIPTLKQRLAK
                     PSDVVDLGGIKELAGIKVEGNNVVIGAMTRHAEVATSADIKRAIPALAHLAGHIGDPQ
                     VRNRGTIGGSIANNDPAADYPAAVVALNATVTTNTGKHTADGFFKGLFETALADGELI
                     TSVSFPKAEKAAYMKFPNPASRYAMVGVFVAKTAGGVRVAVTGAGSSVFRVKAMEDAL
                     AKNFSSAAIKDIKIAADGLNSDIHGSAEYRAHLVGVMARRAVDAANK"
     gene            1064..1696
                     /gene="pcp"
                     /locus_tag="VF991_12745"
     CDS             1064..1696
                     /gene="pcp"
                     /locus_tag="VF991_12745"
                     /EC_number="3.4.19.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HEX9557360.1"
                     /translation="MVTGFEPFGGDKVNPSSLAVARLKKRIGEVVVHTAELPTSYAHS
                     ADVLRLAIEEAKPEIVLCVGQAGGRTELCLERVAINVQDARIRDNDGRQPIDKPVVKG
                     GPAAHFATLPIKACVAAMRKAGLPAAVSNTAGTFVCNHIFYALMDIAQSHPIPMRGGF
                     LHIPYVPEQAARLGGAPSMALEDIVRGIEIVLDVSANRESDLHTVEGRLS"
     gene            complement(1703..>3706)
                     /locus_tag="VF991_12750"
     CDS             complement(1703..>3706)
                     /locus_tag="VF991_12750"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9557361.1"
                     /translation="LSVPLVLAITFVGMMLLGIDFQRISLGALIIALGLLVDDAIIAV
                     EMMMVKLEQGASRLEAATYAYTSTAFPMLTGTLVTAIGFVPVGFARSSAGEYTNSIFW
                     VVGLSLIISWFVAVLFTPWMGYHLLPQPKVHHADPYDGRLYRLFRRLVVWCVTWRKTT
                     IAITALAFVASLGAFTLVQKQFFPTANRPELIVDMKLAQGASWKATDKEVRKLEKWLG
                     ENPDVAFYTAYVGAGSPRFYLPTVPELSNANFGQVIVMTKDLDARERVFAQLDKLFAS
                     DFEAVRARVQRLQNGPPVAYPVMFRVLGEEPQQVRAVAEQVRQVFKADPATRDVNFDW
                     NELAKTVRLEIDQNKARALGIDSQILGNTLQTLLSGVTVTQYRERTESIDVVARAVSA
                     ERLSVEGLEAINLRTGNGGVVSLAQLATLHFELEEPILWRRNKELLMTVRAGVVDGVQ
                     GPDVAARIDKALAPVRAELPAGYRIEVGGDKEESAKSQGSIFKMMPVMAFLMLMFLML
                     QLQSFSKLALVVLTAPLGLIGVSLFLLVFNQPFGFVSLLGVIALAGMIMRNSVILVDQ
                     IDQDIAAGHTAWDAVIDATVRRARPILLTAGTAIFAMIPLSRSVFWGPMAVALMGGLL
                     VATALTLLFLPALYAAWFRVKQPATKPALVEAPASAPLVIAAE"
BASE COUNT          651 a         1258 c         1249 g          548 t
ORIGIN      
        1 gcgccgacaa cgtgccgtcg ttcaagctcg gcaacaaggt cacgccctgt ccgcacaatc
       61 cgctgggcgt caagggttgc ggcgaggccg gcgcgatcgc cgcgccggcc gccgtcatga
      121 atgccgtgcg cgatgccctg gcgccgctcg gcgtcaagca cgtcgagatg cccgcgacgc
      181 cgctcaacgt gtggcaatcg attcaaggcg cccagcatgc ggcggccgag taaccggagg
      241 acttgaagat gtacgatttc gcctaccacc gtccgaagtc gctcgccgat gccgtcggcc
      301 tcctgaagag caagcccgag gcccgcgcca tgtcgggcgg catgaccctg atcccgacgc
      361 tgaagcagcg cctggcaaag ccgagcgacg tcgtcgatct cggcggcatc aaggagctgg
      421 ccggcatcaa ggtcgagggc aacaacgtgg tgatcggcgc catgacccgg catgccgagg
      481 tcgcgacctc ggccgacatc aagcgcgcga ttcccgcgct cgcccatctc gccggccata
      541 tcggcgatcc gcaggtccgc aaccgcggca ccatcggcgg ctcgattgcc aacaacgatc
      601 cggcggcgga ctacccggcg gctgtcgtgg cgctcaacgc cacggtgacc accaacaccg
      661 gcaagcacac cgccgacggc ttcttcaagg gcctgttcga gacggccctc gccgacggcg
      721 agctgatcac ctcggtgagc ttccccaagg ccgagaaggc cgcctacatg aagtttccca
      781 acccggcgtc acgctacgcc atggtcggcg tgttcgtggc caagaccgcg ggcggcgtgc
      841 gggtggcggt gaccggcgcg ggttccagcg tctttcgcgt caaggcgatg gaggatgcgc
      901 tcgccaagaa cttctcctcg gcggcgatca aggacatcaa gatcgcggcc gacgggctca
      961 acagcgacat ccacggcagc gccgaatatc gcgcccatct cgtcggcgtg atggcgcggc
     1021 gcgccgtcga cgcggccaac aagtagacgc tgccctgaag gcactggtca cgggcttcga
     1081 gcctttcggc ggcgacaagg tcaacccgtc atcgctggcg gttgcccgat tgaaaaagcg
     1141 catcggcgag gtggttgtgc acaccgccga actgccgacc tcctacgcgc attccgccga
     1201 cgtgctgcgg ttggcgatcg aggaggccaa gcccgagatc gtgctgtgcg tgggccaggc
     1261 gggcggccgc accgagcttt gcctcgaacg cgtggcgatc aacgtccagg acgcgcgcat
     1321 ccgcgacaat gacggtcgcc agccgatcga caagccggtc gtgaagggcg ggccggcggc
     1381 gcacttcgcg accctgccga tcaaggcctg cgtggcggcg atgcgcaagg cggggctgcc
     1441 cgccgccgtg tcgaacaccg ccggcacctt cgtctgcaac cacatcttct atgcgctgat
     1501 ggatatcgcc cagagccatc ccatcccgat gcgcggcggc ttcctgcaca ttccctacgt
     1561 gccggaacag gcggcccggc tcggcggcgc gccgtcgatg gcgctcgagg atatcgtgcg
     1621 cggtatcgag atcgtcctcg acgtcagcgc caatcgcgag agcgacctcc acacggtcga
     1681 aggccgcctt tcctagcaga gactattcgg cagcgatcac caggggcgcg gatgccggcg
     1741 cctcgacaag cgcgggcttc gtagccggct gcttcacgcg gaaccaggcg gcgtagagcg
     1801 ccggcaggaa gagcagcgtc agtgccgtcg ccaccagcag accgcccatc agggcgaccg
     1861 ccatcgggcc ccagaacacg ctgcgagaca gcgggatcat ggcgaagatg gcggtgcccg
     1921 cggtgagcag gatcggccgc gcgcggcgca ccgtggcgtc gatcacggcg tcccaggcgg
     1981 tgtggccggc ggcgatgtcc tggtcgatct ggtcgaccag gatcaccgag ttgcgcatga
     2041 tcatgccggc aagcgcgatc acgcccaaga gcgagacgaa gccgaacggc tggttgaaca
     2101 ccagcaggaa cagcgagacg ccgatcaggc cgagcggcgc ggtcagcacg accagggcga
     2161 gcttggagaa gctctgcagc tgcagcatca ggaacatcag catcaggaac gccatcaccg
     2221 gcatcatctt gaagatcgag ccctggctct tggcgctctc ctccttgtcg ccgccgacct
     2281 cgatgcgata gccggccggc agctcggcgc gcaccggcgc cagcgccttg tcgatgcgcg
     2341 cggccacgtc cgggccctgc acgccgtcga ccacgccggc gcgcacggtc atcagcagct
     2401 ccttgttgcg ccgccacagg atcggctcct cgagctcgaa atgcagggtg gcaagctggg
     2461 ccaacgacac cacgccgcca ttgccggtcc tgaggttgat cgcctccagg ccctcgacgc
     2521 tcagccgctc ggccgacacg gcgcgggcca ccacgtcgat cgattcggtg cgctcgcggt
     2581 attgcgtcac ggtcacgccc gacagcaggg tctgcagcgt gttgccgagg atctgcgagt
     2641 cgatgccgag cgcgcgcgcc ttgttctggt cgatttcgag ccgcaccgtc ttggcgagct
     2701 cgttccagtc gaagttgacg tcgcgcgtgg ccggatcggc cttgaagacc tgccgcacct
     2761 gttcggccac ggcgcggacc tgctgcggct cctcgcccag cacgcggaac atcaccgggt
     2821 aggcgaccgg cgggccgttc tgcagccgct gcacgcgggc tcgcacggcc tcgaaatcgc
     2881 tggcgaacag cttgtcgagc tgggcgaaga cccgttcgcg cgcatccagg tccttggtca
     2941 tgacgatgac ctggccgaag ttggcgttgc tgagctcggg cacggtcggc aggtagaagc
     3001 gcgggctgcc ggcgccgaca taggccgtgt agaaggcgac gtcggggttc tcgcccagcc
     3061 acttctcgag cttgcgtacc tctttgtcgg tcgccttcca cgaggcgccc tgggccagct
     3121 tcatgtcgac gatcagctcg ggccggttgg cggtcgggaa gaactgcttc tgcaccaggg
     3181 tgaaggcgcc cagcgacgcc acgaaagcga gcgcggtgat ggcgatcgtg gtcttgcgcc
     3241 aggtcacgca ccacaccacc agcctgcgga agaggcgata gagccggccg tcataagggt
     3301 cggcatggtg caccttgggc tgcggcagca ggtggtagcc catccacggc gtgaacagca
     3361 cggccacgaa ccacgagatg atcagcgaga ggccgaccac ccagaagatc gagttggtgt
     3421 attcgccggc gctcgaccgg gcgaaaccca ccggcacgaa gccgatcgcg gtgacgagcg
     3481 tgccggtcag catcgggaag gcggtcgagg tgtaggcgta ggtcgcggcc tcgagccggc
     3541 tggcgccctg ctcgagcttc accatcatca tctcgacggc gatgatggcg tcgtcgacca
     3601 gcaggccgag cgcgatgatc agcgcgccga gcgagatcct ctggaagtcg atgccaagca
     3661 gcatcatgcc gacgaaggtg atggccagca ccagcggcac cgagag
//
LOCUS       DASWGA010000539         2122 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1450384, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000539 DASWGA010000000
VERSION     DASWGA010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1450384"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..832
                     /locus_tag="VF991_12755"
                     /pseudo
     CDS             83..832
                     /locus_tag="VF991_12755"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
     gene            complement(837..1403)
                     /locus_tag="VF991_12760"
     CDS             complement(837..1403)
                     /locus_tag="VF991_12760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007633933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEX9557362.1"
                     /translation="MNRNWLAVASAEHVEIGRSAGFMQVCHGKASPLRRVQPGDRVVY
                     YSPNRHYWPSHMSRSKDRLQAFTAIGTVKQGAPYQADMGFGFQPYRRDVDWHDAQPTP
                     IAELEGELAFMQEKNWGYRLRQGLVEISDADMTAIADAMFKASAAPGRPRDGTSRDSA
                     AHTSNSRARSLPSAGRSVRQQTPACHAG"
     gene            complement(1400..1780)
                     /locus_tag="VF991_12765"
     CDS             complement(1400..1780)
                     /locus_tag="VF991_12765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9557363.1"
                     /translation="MSKFSFVLLYVDNPPASAAFYADLLGKPPLEASPTFAMLPLGSE
                     VMLGLWSRRTVEPVATAPGGGEVAFTVADAAAVERTHADWKERGLPIAQAPTAMDFGH
                     TFVALDPDGHRLRVFAPAATGGAQ"
     gene            complement(1846..>2122)
                     /locus_tag="VF991_12770"
     CDS             complement(1846..>2122)
                     /locus_tag="VF991_12770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HEX9557364.1"
                     /translation="PKIRQAIRTERKLGLSYRDKDGAASRRTVWPFAVGFFEKVRVVV
                     AWCELRQDFRHFRTDRIVTLTLTDKRYPRRRQAMLKEWREREGTSEA"
BASE COUNT          347 a          705 c          713 g          357 t
ORIGIN      
        1 cgtgctgcag ttcttcagct ggccaggccg ccacgggccg ctggaagcgg tctatgcgcg
       61 cgcgctcgag cgcatcgaga tcatggatcg cggcggcttc gacgcggtgt ggctggccga
      121 gcaccatttc accaccttca gcgtctgccc ctcggtgcac atgctgggca cgctggccgc
      181 cgcgcgcacc aagcggctgc gcatcggcac ggcggtgtcg ctggccgcgc tctatcaccc
      241 gttgagactg gccgaggagg tggcgctgct cgacatgctg tcgggcggcc gggtcaactg
      301 gggcgccggc cgcggctttg cgcactcgga gttcaacgcc ttcggcgtgc cgccggaaga
      361 aagtgccgag cgctttcgcg aggccgtcga gatcgtccta aaggcctgga cgcaggagcg
      421 tttcaccttc aagggcgcgc attttgcctt cgacgacgtc gaggtgctgc ccaagccctt
      481 gcagcagccg catccgccga cctggatggc ggcaacgtcg gagcaggcca tcgactgggc
      541 ggcaagccgc ggcttttcca tcctgatgga cccgcacgcc tcgaccaagg aactcggcga
      601 caagcgccgc cgctatgccg agaagctcgc cgaagcgggc ttctcggacg aaggccgcga
      661 gattcccatg gcgcggctgg tcgcgctggc gccgaccacg caagaggccg aaaccgtcgc
      721 ccggcgcggc gcgcaatggc tgatcgagtc ctatgccgga ccgcagcacg cgcatcgcaa
      781 gtcgatgcag cgcacctacg gcggccagga tccgacgcag tattatgtcg acaacgtcat
      841 cctgcatggc acgccggcgt ctgttgtcga acagatcggc cggctgaagg aagagatcgg
      901 gctcggctat ttgatgtgtg cgccgctgag tcgcgagacg ttccatctct tggccgacca
      961 ggtgctgccg aggctttgaa catcgcgtcg gcgatggctg tcatgtcggc atcactgatc
     1021 tcgaccaggc cctggcgcag ccggtagccc cagttcttct cctgcatgaa ggccagctcg
     1081 ccctccagct cggcgatcgg cgtcggctgg gcgtcgtgcc agtcgacgtc gcggcggtag
     1141 ggctgaaagc caaagcccat atcggcctgg tagggcgcgc cttgcttgac ggtgccgatg
     1201 gcggtgaagg cctgcagcct gtccttgctg cgcgacatgt ggctcggcca atagtgacgg
     1261 ttcggcgaat aataaacgac ccggtcgccg ggctggacgc gccgcaacgg cgacgccttg
     1321 ccgtggcaga cctgcatgaa gcccgcgctg cgcccgatct cgacatgttc ggcggaagcg
     1381 acggccaacc aattgcgatt cattgggcac ctcccgtcgc ggcaggcgcg aacacgcgta
     1441 ggcgatggcc gtccggatcg agggccacga aggtgtgacc gaaatccatc gccgtcggcg
     1501 cttgtgcgat cggcaggccg cgctccttcc agtcggcatg cgtgcgttcg acggcggcag
     1561 catcggccac cgtgaacgcg acctcgccgc cgccgggcgc cgtcgcaacg ggctcgacag
     1621 tgcggcgcga ccacaggccc agcattactt cgctgcccag gggcaacatg gcgaaggtgg
     1681 gcgacgcctc gagcggcggc ttgcctaaaa gatcggcgta gaaggcggcg ctcgccggag
     1741 ggttgtcgac atagagcagc acgaagctga atttgctcat cgggttctcc ttatcgaggt
     1801 gaacccagcc tacaacctcg tactgtcaga ttctgtcagc agtcttcagg cctcgctcgt
     1861 accctcgcgc tcacgccatt ccttgagcat cgcctggcgg cggcgcggat agcgcttgtc
     1921 ggtgagcgtc agcgtgacga ttcggtcggt gcggaagtgg cggaaatcct ggcgcagctc
     1981 gcaccacgcc acgaccacgc gcaccttctc gaaaaacccc acggcgaacg gccagaccgt
     2041 gcgccggctg gccgcgccgt ccttgtcccg gtacgacagg ccgagcttgc gctcggtccg
     2101 gatggcctgg cggatcttgg gc
//
LOCUS       DASWGA010000540         4955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_61742, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000540 DASWGA010000000
VERSION     DASWGA010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4955
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61742"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..580)
                     /locus_tag="VF991_12775"
     CDS             complement(<1..580)
                     /locus_tag="VF991_12775"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX9557365.1"
                     /translation="MAEVDFKTGPSLADDSEVLARDYESISVGRQFQSGKRLVQALAI
                     SPGERVLDVGCGTGLLAEHIADVAGPAGHVLGIDPLPLRIEIAQSRARPNLVFRVGNA
                     NDLSAIPSASFDGVCLNAVLHWLPEKAGPLREFARVLRPGGELIILTRVSADAGVRRF
                     IEQRLQPVVRPLGFRTAEFAWSRYAKWLAGSRG"
     gene            647..1126
                     /locus_tag="VF991_12780"
     CDS             647..1126
                     /locus_tag="VF991_12780"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9557366.1"
                     /translation="MSSLTLLYRVSDLVGYGQDMAAAKQIETPGSSTKPAILVVEDVV
                     LVRLLLADFLRGRDFHVIEVSNADEALRVLESDFPVDVVLSDIHMPGASMDGLALARW
                     IRAHRPELKVILVSGYVSETDPADAAYHEGAILKKPFNHAELERRLRAALEDTEPGG"
     gene            1426..1605
                     /locus_tag="VF991_12785"
     CDS             1426..1605
                     /locus_tag="VF991_12785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557367.1"
                     /translation="MVESASWKWVPVQDIARRLELDEEVVETAVRRAVEKGWFEATTD
                     WPRRVRLRSDLLDLL"
     gene            complement(1664..3226)
                     /locus_tag="VF991_12790"
     CDS             complement(1664..3226)
                     /locus_tag="VF991_12790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007880420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEX9557368.1"
                     /translation="MSRLDRPGKLGGAMRCAPHDLPLDAPVSTVEALPTVSAIARPGR
                     NCWRIEKATRASVIVDADAYFEAGRVAMLKAKRRIMLIGWDFDARIRLGARHLANEPE
                     TLGDFVLWLVERQPQLEVFVLRWDIGAIRTLFRGTTGVTLLRWMLHKRIFVRLDHATP
                     AGASHHHKIVVIDDCLAFCGGIDMTSNRWDTPEHLDAEPRRISPGGTPYGPWHDATTA
                     LEGPVAAALGELARERWRRAGGQPLEPLGITNDCWPPGLPCHFTDVAVAIGRSHPGTA
                     GQQPIREIEATYLDLIAGARRHIYAENQYFASRRIAEAIARRLGEADGPEIVLINPLS
                     SHGWLEPIAMDTARARLCCALQQLDRHGRLRLYHPCTHDGRAIYVHAKILVVDEQVLH
                     VGSSNMNNRSLRLDTECDVVVDAGLPGNGKSASAIRAIRDGLIAEHLGVDRADVCRRI
                     AASGSLIDTIEALRGPGRSLRPYEIPDLRAVEKWLADNEVLDPEGPEEMFESFTRRGL
                     LRRLRWTFSHRT"
     gene            complement(3340..3732)
                     /locus_tag="VF991_12795"
     CDS             complement(3340..3732)
                     /locus_tag="VF991_12795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9557369.1"
                     /translation="MTSDPTEAPPTILIVENEVLVRMAVAAYLRECGFKVVEARTAAE
                     ALRVFESDITVDVLFCCVDIPGDIDGFSLARWVRRERPQTKVILTSGVRRSAEEAGTL
                     CEQGPHLAKPYDHRNLERRIRRLLAREA"
     gene            3984..4286
                     /locus_tag="VF991_12800"
     CDS             3984..4286
                     /locus_tag="VF991_12800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557370.1"
                     /translation="MKMAVLAALPILLSAAVAQAQRPGTGNPVDVGKIPESGPAVVGG
                     TGATAGPNSKNQAISPMPGLRDEELSEKPPDSALRPLPEVRPIPGPARQQPATPTR"
     gene            complement(4270..>4955)
                     /locus_tag="VF991_12805"
     CDS             complement(4270..>4955)
                     /locus_tag="VF991_12805"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEX9557371.1"
                     /translation="FGEMFDSFNMVHGAAPELLVLADGDHGYGNAMNVQRTVRAYGRA
                     GAAAVLIEDKITPRALTAAGKPCLPRAEARMKMRAAVEAAKESGILILARTDCRPTQG
                     IDEAVARIEMYVAEGADILFLDSPADDGEIRRAVAAAQGKPSFAVLSPGAPRATPSQK
                     EAAALGFKIGTYPTGLLSPATAGMKAGLAALKAGEAEAKSALPPPELRATLGYADYDA
                     RAKPFIVSA"
BASE COUNT          789 a         1627 c         1720 g          819 t
ORIGIN      
        1 ttccgcgcga gcctgccaac cacttcgcat aacgcgacca ggcgaattcg gcggtccgga
       61 aaccgagcgg acgcaccacc ggctgcagcc gctgctcgat gaaacggcgg acaccggcat
      121 cggcgctgac ccgggtcagg atgatcagtt cgccgcccgg ccgcagcacg cgcgcgaact
      181 cccgcaacgg tccggccttc tcgggcagcc aatggagtac cgcattcagg cagacgccat
      241 cgaagctcgc ggaggggatc gccgaaaggt cattggcgtt gccgacacgg aacaccaggt
      301 tgggccgcgc cctcgattgc gcgatttcga tgcgcagcgg cagcggatcg atgcccagaa
      361 cgtgaccggc cgggccggcg acgtccgcga tatgctcggc cagcaggccg gtgccgcaac
      421 cgacatcgag cacgcgctcg cccggtgaga tcgccagcgc ctgcaccagg cgcttgcccg
      481 actggaactg ccggccgacg ctgatgcttt cgtagtcgcg cgccagcacc tcgctgtcgt
      541 cggcgagcga aggtcctgtc ttgaaatcaa cttccgccat gccatccctc ttgttcgctt
      601 cggcccggcc cgccgccggg acggcgacct tccgatgcga ccctctgtgt catcgctcac
      661 tctgctctat cgcgtcagcg acctcgtcgg ctatggtcaa gacatggcgg cagccaagca
      721 gatcgagacg ccggggtctt cgaccaagcc ggcgatcctg gtggtcgagg acgtggtgct
      781 ggtgcgcctg ctcctggccg actttttgcg cgggcgcgac ttccatgtca tcgaagtatc
      841 gaatgccgac gaggcgctgc gcgtgctcga atcggatttt ccggtcgatg tcgtgctgag
      901 cgacatccac atgcccggcg cttcgatgga cgggctggct ctggcgcgct ggatccgcgc
      961 ccatcggccg gagctcaagg tgatcctggt gtccggctac gtcagcgaaa ccgacccggc
     1021 cgacgccgcc tatcacgaag gcgcgatcct gaagaagccc ttcaaccacg cagagctcga
     1081 acggcggctg agggcagcgc tcgaggacac agagcctggc gggtgagctg ggcttggcgg
     1141 gtgacctcgg cggatgacct ggccgtgtgt tgcggccaaa caagcccgcc cggggaggaa
     1201 gttcgggcgg gcttggggca agcgctctgg cggaccgcgt gaggtgtggc gtcagggtcg
     1261 ccagcattgc catgaagcga gccacaccct cccttcaccg aaccaacgcc agctggcggc
     1321 gtacgatgcg tgaccagtcg gtggctgccc tgcccccaac gcttctctcg gactgcaacg
     1381 attagcgtcg gcacggcatt gtttttgtag ggaagagggt gaagcgtggt tgagtccgcg
     1441 tcgtggaaat gggtgccggt gcaggacatt gcacggcgac ttgagctgga cgaggaagtc
     1501 gtcgagacgg ccgttcggcg cgccgtcgag aagggctggt tcgaggccac gaccgactgg
     1561 cctcggcggg tgcgtctgcg ttccgatttg ctcgacctgc tttgatcgag aagtcgggtc
     1621 acccccggtt cgccggcgtt tgctcgggca ccgcgacgca ggttcaagtc cggtgcgaga
     1681 aggtccatcg cagacggcgc aacaggccgc gccgggtgaa gctttcgaac atttcctccg
     1741 gaccttccgg atccagcact tcattgtcgg ccagccactt ctcaacggcc ctgagatcgg
     1801 ggatttcgta gggacgcagc gaccggccgg gaccgcgcag cgcctcgatc gtgtcgatca
     1861 gcgagccgct cgccgcgatc cggcggcaga cgtcggccct atccacgccg agatgctcgg
     1921 cgatcaggcc gtcgcggatg gcgcggatgg ccgacgcgct cttgccattg cccggcaggc
     1981 cggcatcgac cacgacgtcg cattcggtgt cgagcctcag cgagcggttg ttcatgttcg
     2041 acgagccgac atgcaggacc tgctcgtcga ccaccaggat cttggcgtgc acgtagatcg
     2101 cccggccgtc gtgcgtgcac ggatggtaga gtcggagccg tccatgccgg tcgagctgct
     2161 gcagcgcgca acagagccgg gcgcgggccg tatccatggc gatcggttcc agccagccat
     2221 gcgagctcag cggattgatc agtacgatct ccggcccgtc ggcttcgccg agtcgccgcg
     2281 cgatcgcctc ggcgatgcgg cgcgaagcga aatactggtt ctcggcatag atgtgcctgc
     2341 gcgcgccggc gatcaggtcg aggtaggtcg cctcgatctc gcggatcggt tgctgtccgg
     2401 ccgtaccggg atgggaccgg ccgatcgcga cggcgacgtc ggtgaaatgg caaggaagtc
     2461 ccggcggcca gcaatcgttg gtgatgccca gtggctcgag cggctggccg cccgcccgcc
     2521 gccagcgctc gcgcgcgagc tcgcccagcg cggcggcgac ggggccttcg agggccgtcg
     2581 tggcgtcgtg ccaggggccg tagggcgtgc cgccgggcga gatgcgccgc ggttcggcgt
     2641 cgagatgctc tggcgtgtcc cagcggttgc tggtcatgtc gatgccgccg cagaacgcca
     2701 ggcagtcgtc gatgacgacg atcttgtgat ggtgcgaggc gccggccggc gtcgcatggt
     2761 cgagacgcac gaagatgcgc ttgtgcagca tccaccgcag gagcgtgacg ccggtggtgc
     2821 cgcggaacag ggtgcggatg gcgccaatgt cccatcgcag gacgaagact tcgagctgcg
     2881 gttggcgctc gaccagccac agcacgaagt cgcccaaggt ttcgggctcg ttggccaggt
     2941 gccgggcgcc gagccggatg cgggcatcga aatcccagcc gatcagcatg atgcgccgct
     3001 tggccttcag catggccacg cggccggcct cgaaataggc gtcggcatcg acgattaccg
     3061 aggcgcgggt ggccttctcg atacgccagc agttgcggcc gggccgggcg atggccgata
     3121 cggtcggcaa ggcctcgacg gtgctcacgg gagcgtcgag cggcagatcg tgcggcgcgc
     3181 aacgcattgc gccgccaagc ttgccgggcc ggtccagtcg agacatgcct gtcaacgccg
     3241 gtcttcgatc aaggctccgt gtccttgccg gctgtccccg cgcgcgccgg cagggctgcc
     3301 agtggcagac ccggaggctg ttatcgatcc ggcacagtcc tacgcttcgc gcgcgagcag
     3361 ccggcgaatg cggcgctcga ggttgcgatg gtcatagggc ttggcgagat gcggcccctg
     3421 ctcgcagagc gtccctgcct cctcggccga gcgacgcacg ccggacgtca ggatgacttt
     3481 cgtctgcggc cgttcgcggc ggacccatcg ggcgaggctg aaaccatcga tgtcccccgg
     3541 gatgtcgacg cagcaaaaca gcacgtcgac cgtgatgtcg gattcaaata cgcggagcgc
     3601 ctccgcggcg gttcttgcct cgacgacctt gaagccgcac tcccgcagat aggctgcaac
     3661 ggccatgcgg acgagcactt cgttttccac gatcaggatg gttggcggag cctcggttgg
     3721 atcggaagtc atggcgcgct aacgtcggcg gcgacgctaa tgttccagag cgccttgtat
     3781 tccagagtac cttgtgtgtg cggaacaacg tcccgctcaa gacgttgtgg tctacggggc
     3841 caatggacga tggcggcgtg ctatcacgca aatatcacca acgtcgtctt tgccggagtg
     3901 gcgatcgctg ctccaaggcc cggcggaatc tggaacgcca cgacgatctg cgagttgatt
     3961 gactgtcgct tgtggaggtt cccatgaaga tggcagtcct tgcggcattg cccatcctgc
     4021 tcagtgccgc tgtcgcgcag gcccagcgtc ccgggaccgg caaccccgtc gatgtcggaa
     4081 agatccccga atcgggaccg gcggtggtcg gcgggacggg cgcgacggcc ggtcccaatt
     4141 ccaagaacca ggcgatcagc ccgatgcccg gcctgcgcga cgaggagctg agcgagaagc
     4201 cacccgattc agcgctccgg cccctgccgg aggtccgccc gataccgggc ccggcacgcc
     4261 agcaaccggc tacgccgaca cgatgaacgg cttggccctg gcgtcgtaat cggcatagcc
     4321 cagggtggcg cgcagctcgg gtggcggcag cgcgctcttg gcttcggcct cgccggcctt
     4381 gagcgcggcc aagcctgcct tcatgccggc cgttgccggc gacagcagac cggtcggata
     4441 agtgccgatc ttgaagccga gtgcggcggc ctccttttgc gacggcgtgg cacgcggcgc
     4501 gccgggcgag agcacggcga agctgggctt gccttgcgcg gcggcgacgg cgcggcgaat
     4561 ctcgccgtcg tcggccggcg agtcgaggaa caggatgtcg gcgccctccg ccacgtacat
     4621 ttcgatgcgc gccacggcct cgtcgatgcc ttgggtcggc cggcaatcgg tgcgcgccag
     4681 gatcaggatg cccgattcct tggccgcctc gacggcggcg cgcatcttca tccgcgcctc
     4741 ggcgcgcggc aggcaaggct tgccggcggc ggtcagcgca cgcggcgtga tcttgtcctc
     4801 gatcagcacc gcggcggcgc cggcgcggcc ataggcgcgc acggtacgct gcacgttcat
     4861 ggcgttgccg tagccgtgat cgccgtcggc cagcaccagc agttcgggcg ccgcgccatg
     4921 caccatgttg aaggagtcga acatctcgcc gaacg
//
LOCUS       DASWGA010000541         1747 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_61798, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000541 DASWGA010000000
VERSION     DASWGA010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61798"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1672
                     /locus_tag="VF991_12810"
     CDS             <1..1672
                     /locus_tag="VF991_12810"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF004559.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX9557372.1"
                     /translation="PNNDHLIFSKGHASPLVYAMFKAVGAITDTEMMTFRKFGSRLQG
                     HPTPEIPWVDVATGSLGQGLPIAVGISMAGQKLDQLPYHVWCLCGDSELAEGSIWEAF
                     DKAGFYGLSNLTAILDINRLGQRGETEYGWSIDTYRRRIEAFGCFPTVIDGHDVTAID
                     RAYGTALSATGKPTVIIAKTIKGKGFSEIENKDGWHGKALPPDMAERAIKELGGIRHL
                     KVKTAKPEASMPAIKHTDAPVTLPTYKKEDKVATRKAYGDALLALAAIPDVVAMDGEV
                     SNSTHADEFAKAHPERFFEIYIAEQQLVATAVGMSVRGYRPFASTFAAFFSRAYDFIR
                     MAGISQANIRLVGSHAGVEIGQDGPSQMALEDLAAMRAIHSSTVLYPSDPNQTAKLTQ
                     LMAHENGIVYMRTTRGAYPTIYGPADTFKIGGAKVVRQSAKDRVTLIGAGVTLHNCIA
                     AADTLAQKKIAARVIDLYSVKPVDVKTLKEAAKATKGRFVVVEDHYPQGGLGAAVLEA
                     FAPEDGLHLAHLAVKGLPTSGKPEELMNAAGISARHIVAAATKLLAGK"
BASE COUNT          332 a          609 c          550 g          256 t
ORIGIN      
        1 ccccaacaac gaccacctga tcttctcgaa gggccacgct tcgccgctcg tttacgcgat
       61 gttcaaggca gtcggagcga tcacggacac cgagatgatg accttccgca agttcgggtc
      121 tcggctgcag ggccacccca cgccggagat cccatgggtg gacgtcgcca ccggatcact
      181 cggccagggt ttgccgatcg cggtcggcat ctcgatggcc ggacagaagc tggaccagct
      241 cccgtatcac gtctggtgtc tgtgcggcga ctccgagctc gccgagggct cgatctggga
      301 ggcctttgac aaggccggtt tctacgggct ctccaacctc accgccatcc tcgacatcaa
      361 ccggctcggc cagcgcggcg agaccgaata cggctggagt atcgacacgt accgccgccg
      421 gatcgaggcg tttggctgct tcccgacggt gatcgacggc cacgacgtca ccgccatcga
      481 ccgcgcctat ggcaccgcgc tctcggcgac cggcaagccg accgtgatca tcgccaagac
      541 gatcaagggc aagggtttct cggagatcga gaacaaggac ggctggcacg gcaaggccct
      601 gcctcccgac atggccgagc gggcgatcaa ggagctcggc gggatccgcc acctcaaggt
      661 gaagacggcc aagcccgagg cgagcatgcc ggcaatcaag cacaccgacg ccccggtcac
      721 cctgcccacg tataagaagg aagacaaggt cgccacgcgc aaggcgtatg gcgacgcgct
      781 gctcgcgctg gccgccatcc cagacgtcgt cgctatggac ggcgaggtgt ccaactccac
      841 gcacgccgac gagttcgcga aggcgcaccc ggagcgcttc ttcgagatct acatcgccga
      901 gcagcagctg gtggcgacag cggttggcat gagcgtccgc ggctaccggc cgttcgcgtc
      961 cacgttcgca gccttcttca gccgcgcgta cgacttcatc cgcatggccg gcatctcgca
     1021 ggccaacatc aggctcgtcg gctctcacgc cggcgtcgag atcggccagg acggcccgtc
     1081 gcagatggcg ctcgaggatc tggcggcgat gcgcgcgatc cattcgtcga ccgtgctgta
     1141 ccccagcgat cccaaccaga ccgcgaagct cacccagctc atggcccacg agaacggcat
     1201 cgtctacatg cgcacaacac gcggcgcgta cccgaccatc tacgggcccg ccgacacatt
     1261 caagatcggc ggcgccaaag tcgtgcgcca aagcgccaag gaccgcgtca cgctcatcgg
     1321 cgccggcgtg actctccaca actgcattgc ggccgcggac acgctggccc agaagaagat
     1381 cgccgcgcgc gtcatcgatc tctactcggt caagccggtc gacgtgaaaa cgttgaagga
     1441 ggcggcgaag gcgaccaagg gcaggttcgt cgtcgtcgag gaccactacc cgcagggcgg
     1501 cctcggcgcc gccgtcctcg aggctttcgc tcctgaggac gggctgcacc tggcgcatct
     1561 cgcggtcaag ggcctgccga cctcaggcaa gcccgaagag ctgatgaacg ccgccggcat
     1621 ctcggcgcgg cacatcgtgg cggccgcgac caagctgctt gccgggaagt agggccatgg
     1681 cgacgaagac gcgcgtgccg gcgccggtca aagagctcaa gaacctcggc cagtcgctct
     1741 ggctcga
//
LOCUS       DASWGA010000542         2209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1828781, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000542 DASWGA010000000
VERSION     DASWGA010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2209
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1828781"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..537
                     /locus_tag="VF991_12815"
     CDS             118..537
                     /locus_tag="VF991_12815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557373.1"
                     /translation="MNASSDRLLRRTLWGNAVFSVVSGAVLAMFARPFADAAAHVPVA
                     VMGLDLAVVFELLGLGVVAFGALCAWIASRPTLPEGWARLIFAADLAWVAGSVLVLAL
                     PASWTTAGIAGIGVVALIVADIAILEYLGLRRLGSAT"
     gene            550..945
                     /locus_tag="VF991_12820"
     CDS             550..945
                     /locus_tag="VF991_12820"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9557374.1"
                     /translation="MDKLQLLNDQQLPFAKVLGLKFVAASETGVKAEMVVRPELCTRP
                     DILHGGAVMAFADTLGAAATILNLPEGKGTTTIESKTNFVGPAPLGTTVIGETTPIHR
                     GRRTMVWQTRVSTAEGKLVALVTQTQMVL"
     gene            complement(949..1533)
                     /locus_tag="VF991_12825"
     CDS             complement(949..1533)
                     /locus_tag="VF991_12825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557375.1"
                     /translation="MSRIAAIAIAAALVCGTAWAQTQSTTPTTDPGTKLAFPASLGGA
                     TFERSVNYAGPPSNRPDLGSSYFYSTPKKMIITVQVFDGGRRVPVGSASPIVVSEFTS
                     ELESVGEQIKGSGYTHFERPSVPSSCTYGSTTFRCITYSALNQSNMRLYSKLLLTGYQ
                     NHFIKIRIDWSQGHQQTSADAEAALQAFIPALLR"
     gene            complement(1526..>2209)
                     /locus_tag="VF991_12830"
     CDS             complement(1526..>2209)
                     /locus_tag="VF991_12830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011994921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HEX9557376.1"
                     /translation="RDDLRRTVDIARSVTNLVKPLSLSRRVTSQAVIEQAAIAGAFKP
                     DILADAELAKQTADYIARRLDAVSAPLERGWTGEPTPDGGLAFSRRLRGVQERHVIDG
                     PLIKSAEARKLDALAAELQAIYLRPGIFAAKDKETTISSPTELFAAVLEAGRKGVTIQ
                     RYKGLGEMNPDQLWETTLDPEARALLQVKVNHADEADEIFSTLMGDVVEPRREFIQDN
                     ALKVANLDV"
BASE COUNT          320 a          735 c          762 g          392 t
ORIGIN      
        1 catcatgacc ggcacagtag caccggggcg cggccccgcc gattacctgg cgcgtaattg
       61 ctgcggcggc gcggcggtgc gacctctggc gcgtccgtac acgccaagga ggacgtcatg
      121 aacgcttcat ccgatcgcct gctgcggcgc accctgtggg gcaacgccgt cttctccgtc
      181 gtctccggcg ccgtgctggc gatgttcgcc cgcccgttcg ccgatgccgc tgcccacgtt
      241 cccgtcgccg tgatgggttt ggacctcgcc gtcgtgttcg agcttctggg cttgggcgtg
      301 gtcgctttcg gcgcgctctg cgcctggatt gcctcgcgcc cgacgctgcc cgagggctgg
      361 gcccggctga ttttcgccgc cgacctcgcc tgggtggcgg gaagcgtgct ggtgctggcc
      421 ctgccggcgt cgtggaccac ggccggcatc gccggcattg gggtggtcgc cctgatcgtg
      481 gccgacatcg ccattctgga gtatctcggc ctgcgccggc tcggcagcgc gacctagagg
      541 aaaccgacca tggacaagct tcagctcctg aacgatcagc aactgccctt cgccaaggtt
      601 ctggggctga agtttgtcgc cgccagcgaa acgggcgtga aggccgagat ggtcgtccgg
      661 cccgagctct gcacgcggcc cgacatactg cacggcggcg ccgtgatggc ctttgccgat
      721 acactgggtg ccgccgcgac catactgaac ctgcccgagg gcaagggcac gaccacgatc
      781 gagagcaaga ccaacttcgt cggtcccgcc ccgttgggca ccaccgtcat cggcgagacc
      841 acgccgatcc atcgcggccg gcgcaccatg gtgtggcaga cgcgcgtgag caccgccgag
      901 ggcaagctgg tagccctcgt cacccagacc cagatggtgc tgtagccctc agcgcagcaa
      961 ggcgggaatg aaagcctgca gggcggcttc cgcatcggcg ctggtctgct ggtggccctg
     1021 gctccaatcg atgcggatct tgatgaagtg gttctggtat ccggtcagca ggagcttgct
     1081 gtagaggcgc atgttcgact ggttgagcgc gctgtaggtg atgcagcgaa aggtcgtcga
     1141 gccgtaggtg cagctcgacg gcaccgaggg ccgctcaaaa tgggtgtagc cacttccctt
     1201 gatctgctcg cccaccgatt cgagttcgct ggtgaactcg ctgaccacga tcggactggc
     1261 gctgcccacc ggcacgcgcc gcccgccgtc gaagacctgg accgtgatga tcattttctt
     1321 gggcgtcgaa tagaaatagc tcgatcccag gtcgggccga ttggagggcg gcccggcata
     1381 gttgaccgag cgctcgaacg tggcgccgcc caggctcgcc gggaaggcga gcttggtgcc
     1441 gggatcggtc gtcggcgtcg tcgactgggt ctgcgcccag gccgtgccgc agaccaacgc
     1501 cgctgcgatc gcgatcgccg cgatcctaga catcgaggtt cgccactttc agcgcgttgt
     1561 cctggatgaa ctcgcggcgc ggctcgacca cgtcgcccat cagggtcgag aagatctcgt
     1621 cggcctcgtc ggcgtggttg accttgacct gcaacagggc gcgcgcctcg ggatccagcg
     1681 tcgtctccca gagctggtcg ggattcattt cgcccagccc cttgtagcgc tggatggtga
     1741 cacccttgcg gccggcctcg agaaccgccg cgaacagctc ggtcggcgag gagatcgtcg
     1801 tctccttgtc cttggcggcg aagatgccgg gcctcaggta gatcgcctgc agctcggcgg
     1861 cgagcgcgtc gagcttgcgc gcctcggcgc tcttgatcag cggcccgtcg atgacatgcc
     1921 gctcctgcac gccgcgcagg cggcggctga aggcaaggcc gccgtccggc gtcggttcgc
     1981 cggtccagcc gcgttcgagc ggcgcgctga ccgcatcgag ccggcgggcg atgtagtcgg
     2041 ccgtctgctt ggcgagctcg gcgtcggcca ggatgtcggg cttgaaggcg ccggcgatgg
     2101 cggcctgctc gatcaccgcc tggctggtga cgcggcgcga cagcgacaac ggcttcacca
     2161 ggttggtgac cgaccgggcg atgtcgacgg tgcggcgcaa atcgtccct
//
LOCUS       DASWGA010000543        10461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1074296, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000543 DASWGA010000000
VERSION     DASWGA010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10461
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1074296"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="VF991_12835"
     CDS             <1..214
                     /locus_tag="VF991_12835"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9557377.1"
                     /translation="ARFKVIPDMRWDHKEYIFAANRAVSVWTVKGKGADGEELNYQGC
                     DIYTFRGGKICAKDTYWKIVEHKDRL"
     gene            214..1932
                     /locus_tag="VF991_12840"
     CDS             214..1932
                     /locus_tag="VF991_12840"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557378.1"
                     /translation="MALDLLIRGGTVVDGSGKPRFGADVGIKDGRIVDIGRITGQAAR
                     TLDADGLIVAPGFIDGHTHMDAQVAWDPLGSCSCWHGVTSVVMSNCGFALAPCKPADR
                     DWYARCLSAVEDIPTEAMAAGIDWTWETFPEYLATVERLPKAINYGMYIGHSALRMYV
                     MGKRALTEAASEDDMTRMAAAVQEALKAGALGFSSSRASTHVTPDDTPVASRIAEWEE
                     IDRIMAAMAELDTGIFQVGPDIASGARHRTFLDRLRKVALDYKRPIMFGVLSTRQGED
                     PITWDYQTKYIDDTVAAGGRMFGQGTTKSINAIFSLKSYLPFDVLPAWRAVRALPIDE
                     QKRRLADPAVRRELIAAEAKMKPRDNTVQGGGAATTDPRKPDYANLFAMKGVEWDDPT
                     VAELARSRGQHPVEVMIDLSLANADQVYIQPIVNESPDDVLGILKHPRTLATFSDSGA
                     HVCQEMGSSLQTHLLSYWVRKRGAFTLEQAIKKLTHDNAMAWELKGRGLVREGYQADL
                     VLFEENRIRPCLPTVEKDLPGGARRLVQKAEGIKATLVNGAVAFENGEATGSYLGHVL
                     KGKLAS"
     gene            1929..2174
                     /locus_tag="VF991_12845"
     CDS             1929..2174
                     /locus_tag="VF991_12845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557379.1"
                     /translation="MTRLLAVLLVIVLAGAASAQSKSAPASTAGTAGVKTHLQALHYR
                     NVHDLRRGPDGQWVGKATQGNSEKSVTIAPDGTVIAR"
     gene            complement(2171..3136)
                     /locus_tag="VF991_12850"
     CDS             complement(2171..3136)
                     /locus_tag="VF991_12850"
                     /inference="COORDINATES: protein motif:HMM:NF024884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HEX9557380.1"
                     /translation="MMQIGEHPLLRRRPVAGLAVSAVLVGGALAARLAMGNLLLDVPY
                     ITFFSVVAISAFVGGWYAGLFASALSTGVSLYFALPPRFSFEVASPGQVLGLVTFAIT
                     CGLIVLLTHIVTRAAEANVALAEQRQILLMELQHRIKNHLQLMGAMLATHARATTNER
                     IRARLIEAGQRLQVIATTYDNLYEPGALIDMSEHLRKVCAFVEGGVADRTSKITVDAV
                     ATRWPVERVIPLSLIANELLTNAVKHAAPDKNLEIDVKLERQDSRMRLSVLTRGTTLP
                     AEFSLDGPGLGLRIASMLAGQLGGRLSTPRLPDALFVVEFPEPAG"
     gene            complement(3238..4269)
                     /locus_tag="VF991_12855"
     CDS             complement(3238..4269)
                     /locus_tag="VF991_12855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine methyltransferase"
                     /protein_id="HEX9557381.1"
                     /translation="MPAPLLQTTVVGSYPQPDWLINRQMLSKVVPRTRLRELWRVPEP
                     FLEQAQDDATLLAIRDMERAGIDIITDGEMRRESYSNRFATALEGIDDAHPAEITNRS
                     GQRTPVPRVVGKIRRTAPVERRDMAFLRANTERLAKITLPGPFTMGQQVKDEFYNDAE
                     AMCMDYAQAVNEEAHDLVKAGADVIQLDEPWLRNDPEAAKRYAVKVINRALEGITVPT
                     VVHLCFGYAAVVRGGKPTGYAFLPQLADSIAQQISIESAQPRLDLGVLKDLAPKKIML
                     GVIDLNDPEIETPRKVADRIRAGLAHVTPDKLLPAPDCGMKYLPRATAFGKLKSLAEG
                     AAIVRRELS"
     gene            complement(4271..5227)
                     /locus_tag="VF991_12860"
     CDS             complement(4271..5227)
                     /locus_tag="VF991_12860"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9557382.1"
                     /translation="MRLLMIAAIAILAAPTAHAQTYPDKPIRVIVPFTAGSATDVVAR
                     AVARSMSIRFGQPVVVENKPGAGGTIGTAQVAKAAPDGYTLLVNSSAHTVNPSIYPSL
                     SYDTAKDLMAISRLAQQPNILVVSPAKGWKTVGDLVKAAKAEPGKITFASAGTGSGTH
                     MNAEKFRISAGIDALHVPYKGTPEALTDTMNGRVDYFFAPVIAGLSMVRDGRLTALAV
                     GSEARSSVLPDVPTTEEAGYKGSAYNFWVGMLAPTGTPTAIVERLNKEVAAALASPEV
                     KERLGALGADASPTTPADLDKTIARELKENAELVKQAGIKVQ"
     gene            complement(5248..6621)
                     /locus_tag="VF991_12865"
     CDS             complement(5248..6621)
                     /locus_tag="VF991_12865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557383.1"
                     /translation="MKRLLLKSGIVVTQDRKLGVLPAGDVLVEDGRIAAIAPSLAADA
                     ETINCAGHFVLPGLINAHMHTWQTALRSVAANWTLLEYFRHVHAGLATVFVPDDIHIA
                     TLAGALNQLDHGVTTLVDWCHNNPTPEHTDAGIAGLKDSGIRAAFFHGSPKPDAKPGE
                     PHFSEVPHPRAEIERLLQGPLSDRSALVTLGMAVLGPHYSTLEVSVHDFALARELGLI
                     ASMHQGGGEAKTPGGWEALMARSLVGPHINIVHGNNLTDAQLKAFVEAGVSFSVTPEN
                     EMTQGHGHPITGRLRALGSGPSVGVDLESAIGGDMFTVARMTLASQRALDNAAERASS
                     GGIPATSTVPAAEALDWITTRGAAMLGMSDRIGSLTPGKQADIAVMSLGPLAMWPVHD
                     AVASVVMQGSGARVRDVLVAGKFAKRDGKLLRSDLGTIRRRLAASGERILAQLDIKSV
                     SRQVVAQ"
     gene            complement(6727..7656)
                     /locus_tag="VF991_12870"
     CDS             complement(6727..7656)
                     /locus_tag="VF991_12870"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9557384.1"
                     /translation="MSSKASHDIGWIGLGRMGEAMAARLVKAGHGLSVWNRTASKADP
                     LAKIGAEVVTDKAAMAHCATVFTMVSTTDDLKDILFGAGGVLTGNARPKRVVDMSSIS
                     DHGSAEIRKGLSDAGVAYLSAPVSGNAKVAKAGKLLVVASGPRAEYDAVQPLLAALGR
                     AAMYVGEGELARVWKIAHNTMFGVIIQSLCEITLLAEKAGIPRHLFLESINQSVLGSM
                     YTKYKTPALVNLDFTTTFTPKLLLKDMELGMAAAKSFGVVMPTASVTRDSVLSLSHQY
                     PGDIDFSVLLLELARAAGMKLEPENVKVSDGLQ"
     gene            7728..9527
                     /locus_tag="VF991_12875"
     CDS             7728..9527
                     /locus_tag="VF991_12875"
                     /inference="COORDINATES: protein motif:HMM:NF012821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557385.1"
                     /translation="MSVTFPRAARRLANLVLFGLLVSCTGELPNSAIPANQAERYYSL
                     SATTPIVALIRERDIKTPDESSPVPLLEQLRRELAKSDPSGAFAGITYDLSAGNTLPN
                     DWLVQSPTRWGHRADDLPFYPLACKDCERDVLLPSCSSDADCPNGGTCRTIWAATPSA
                     RPARRNVCFGHSDALLLPVHDLIANARRSVDIAALQPVPGTRFLAALRAGLNTLAATG
                     RPAAVRLVIGQYPPDGVDAAALLSSLTSDLRDIPGARLTVSVAAMRSHSFSWPHAKFI
                     AVDGREVEVGGHNLWSEDYLVDEPVHDLSMRVRGPAAASASRFADRLWQFVCTHLDKK
                     PSVQLATFASGQSVAPGACPDAFAPPAAGRPAVGGLPILAVGRLGAGITADFASQSEL
                     ARDLAFGAARHRILLSQQDIGFILGRADPIFPESTLDRLLDFIEQRDGHVYIVLSNPG
                     AAGNSGSTYSNEVSLAALARHLRAMVQKRVDARDPKERYEIRKGPDPVNALLCSHVHL
                     APLRFGPDATWPGGKAIGNHAKLWMVDDRVFYIGSDNLYPVNLQEFGYIVDDPKAAAE
                     LIDDYWNPLWQWSQRAAVSGEGVEPCIFRTPQK"
     gene            9645..9917
                     /locus_tag="VF991_12880"
     CDS             9645..9917
                     /locus_tag="VF991_12880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557386.1"
                     /translation="MIANLKWLMPLVAVGLPLAASAQISDATYCRRLTARYEAFVENM
                     NGHSLQPGSLDGQVAVEQCKEGNTAAGIPVLERKLQDAKIALPKRS"
     gene            10002..10274
                     /locus_tag="VF991_12885"
     CDS             10002..10274
                     /locus_tag="VF991_12885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557387.1"
                     /translation="MRSIHWLLPAATILMPLAASAQMSDAAYCKALTQKYEVYIFTTS
                     VGRSPGVGTVDGSVAIEQCKAGNTATGIPVLEKKLRNARIDLPSRG"
     gene            complement(10278..>10461)
                     /locus_tag="VF991_12890"
     CDS             complement(10278..>10461)
                     /locus_tag="VF991_12890"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the hydrolysis of a monocarboxylic acid
                     amid to form a monocarboxylate and ammonia; Derived by
                     automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9557388.1"
                     /translation="ALLAPLLGLPGLAVPVGSHGKLRTGIQIMAMRNREDLCLDAGEV
                     IEAAEGVVTPIDPVPA"
BASE COUNT         1710 a         3486 c         3513 g         1752 t
ORIGIN      
        1 cgcgcgcttc aaggtgatcc ccgacatgcg ctgggaccac aaggagtaca tcttcgcagc
       61 caaccgcgcg gtctcggtat ggacggtgaa aggcaagggc gccgacggcg aggagctgaa
      121 ctaccagggc tgcgacatct ataccttccg cggcggaaag atctgcgcca aggacaccta
      181 ctggaagatc gtcgagcaca aggaccgcct gtgatggcgc tcgatctgct catccggggc
      241 ggcaccgtcg tcgacggctc gggcaagccg cgtttcggcg ccgacgtcgg catcaaggac
      301 ggtcgcatcg tcgacatcgg caggatcacc ggccaggcgg cgcgcactct cgatgccgac
      361 gggctgatcg tggcgccggg cttcatcgac ggccacaccc acatggatgc ccaggtcgcc
      421 tgggatccgc tgggcagctg ttcgtgctgg catggcgtga cgtcggtggt gatgagcaat
      481 tgcggctttg ccctggcccc gtgcaagccc gccgaccgcg actggtatgc gcgctgcctg
      541 tcggccgtcg aggacatccc gaccgaggcg atggccgccg gcatcgactg gacctgggag
      601 acctttccgg aatatctcgc gaccgtcgag cgcctgccca aggcgatcaa ctacggcatg
      661 tatatcggcc actccgcgct gcgcatgtac gtcatgggca agcgcgcgct caccgaggcg
      721 gcgagcgaag acgacatgac gcgcatggcc gccgcggtgc aggaagcgct caaggcaggc
      781 gccctggggt tctcgagttc gcgcgcgtcg acccacgtga cgccggacga cacgccggtg
      841 gcgagccgca tcgccgagtg ggaggagatc gaccgcatca tggccgccat ggccgagctc
      901 gataccggca tcttccaggt cggccccgac attgcgagcg gcgcgcggca tcgcacgttc
      961 ctcgaccgcc tgcgcaaggt ggcgctcgac tacaagcggc cgatcatgtt cggcgtgctg
     1021 tcgacccggc agggcgagga tcccataacc tgggactatc agacgaaata catcgacgac
     1081 accgtggccg ccggcggccg catgttcggc cagggcacca ccaagtcgat caatgcgatc
     1141 ttctcgctga aatcctacct gccgttcgac gtgctgccgg cgtggcgcgc ggtccgcgcc
     1201 ctgccgattg acgagcagaa gcgccggctc gccgatccgg cggtgcggcg cgagctgatc
     1261 gcggccgagg ccaagatgaa gccgcgcgac aatacagtgc agggcggcgg cgccgccacc
     1321 accgatccgc gcaagcccga ctacgccaac ctgttcgcca tgaagggcgt ggagtgggac
     1381 gatcctacgg tggccgagct cgcgcggtcg cgcggccagc atccagtcga ggtcatgatc
     1441 gatctgtcgt tggccaacgc cgaccaggtc tacatccagc cgatcgtcaa cgaatcgccc
     1501 gacgacgttt tgggcatcct gaagcatccg cgcacgctcg cgaccttctc ggattcgggc
     1561 gcgcacgtct gccaggagat gggctcctcg ctgcagaccc atctgctgag ctactgggtg
     1621 cgcaagcgcg gcgccttcac gctggagcag gcgatcaaga agctgaccca cgacaatgcc
     1681 atggcctggg aactcaaggg ccgcgggctg gtgcgcgagg gctatcaggc cgacctggtg
     1741 ctgttcgagg agaatcgcat caggccctgc ctgcccacgg tggagaagga cctgccgggc
     1801 ggcgcccgcc ggctggtgca gaaggccgag ggcatcaagg ccaccttggt gaacggtgcc
     1861 gtggcattcg agaacggcga ggcgaccggg tcctatttgg gccatgtttt gaagggcaag
     1921 ctcgcgtcat gacgcgactc cttgcggtcc tgcttgtgat cgtcctggcc ggcgctgctt
     1981 cggcgcagag caaatccgct cccgccagca cggcgggaac cgcgggtgtg aagacgcatc
     2041 tccaggccct gcactacagg aacgtccacg acctgaggcg cgggcccgac gggcaatggg
     2101 ttggcaaggc gacgcagggc aacagcgaaa agtcggtgac gatcgcgccc gacggcaccg
     2161 tgatcgcgcg ctagcctgcc ggttcgggga actcgacgac gaacaaggcg tcgggcaggc
     2221 gcggcgtcga cagtcggccg cccagttggc ccgccagcat cgaggcgatg cgcaggccga
     2281 ggcccgggcc gtcgaggctg aactctgccg gcagcgtcgt gccgcgcgtc agcacgctca
     2341 accgcatgcg gctgtcctgg cgctcgagct tgacgtcgat ttcgaggttt ttgtccggcg
     2401 cggcatgctt gacggcgttg gtcagcagct cgttggcgat cagcgacaac gggatcaccc
     2461 gctcgacggg ccagcgcgtc gccaccgcgt cgacggtgat cttcgacgtc cggtcggcga
     2521 cgccgccctc gacgaaggca cagaccttgc gcaggtgctc gctcatgtcg atcagcgcac
     2581 cgggctcata gagattgtcg taggtcgtgg cgatgacctg cagccgttgg ccggcctcga
     2641 tcaggcgggc gcggatgcgc tcgttggtgg tggcccgggc gtgggtcgcc agcatggcac
     2701 ccatcagctg caggtgattc ttgattcgat gctgcagctc catcagcagg atctggcgct
     2761 gctcggcgag cgcgacattg gcctcggcgg cgcgcgtgac gatatgggtc agcaacacga
     2821 tcagcccgca ggtgatcgcg aaggtaacga ggccgaggac ttgcccaggc gatgccacct
     2881 cgaatgagaa tcggggcggc agcgcgaaat agagcgacac cccggtgctc aaggctgagg
     2941 caaacaagcc ggcataccac ccgccgacga aagcgctgat cgccaccacc gaaaagaagg
     3001 tgatgtaggg cacgtccagc agcaggttgc ccatcgccag acgcgccgcc aacgcgccgc
     3061 caaccaggac ggcgctgacc gcaaggcccg cgaccgggcg ccggcgcagc agcgggtgct
     3121 cgccgatctg catcatccag tcttttgtcg gaaggttgtg gtccggcccc atctgacgcc
     3181 gatgctagca gggcgtgtcg gctaccagta attcgaatcg acgggtgtca gcacggtcta
     3241 tgacaattct cgcctcacga tggccgcgcc ctcggcgagt gatttcagtt tgccgaaggc
     3301 cgtggcacgc ggcaggtatt tcattccgca gtccggagcg ggcagcagct tgtcgggcgt
     3361 cacgtgtgcg aggccggcgc ggatgcgatc ggccactttc cgaggagtct cgatctcggg
     3421 atcgttgagg tcgatcacgc ccagcatgat cttcttgggc gcgagatcct tcagcacgcc
     3481 gagatcgagc cggggctgcg ccgattcgat cgaaatctgc tgggcgatac tatcggcaag
     3541 ctgcggcagg aaggcatagc cggtgggctt gccgccgcgc accacggcgg catagccgaa
     3601 gcagagatgc accaccgtcg gcacagtgat cccctcgagc gcgcgattga tcactttcac
     3661 ggcatagcgc ttggcggcct cgggatcgtt gcgcagccac ggctcgtcga gctggatcac
     3721 gtcggcgccg gccttgacga gatcgtgcgc ctcctcgttc acggcctgcg cgtagtccat
     3781 gcacatcgcc tcggcgtcat tgtaaaactc gtccttgacc tgctggccca tggtgaaggg
     3841 gccgggcaag gtgatcttgg cgagccgctc ggtgttggcg cgcaggaacg ccatgtcgcg
     3901 ccgctcgacc ggtgcggtcc gcctgatctt gccgacgacg cgcggcaccg gcgtgcgctg
     3961 gccgctgcgg ttcgtgatct cggccggatg ggcgtcgtcg ataccctcga gcgcggtggc
     4021 gaagcggttg gaatagctct cgcgccgcat ctcgccgtcg gtgatgatgt cgatgccggc
     4081 ccgctccatg tcgcggatgg ccagcagcgt ggcgtcgtcc tgcgcctgtt cgaggaacgg
     4141 ctcgggcacg cgccacagtt ccctgagccg ggtgcgcggc acgaccttgc tgagcatctg
     4201 gcgattgatc agccagtcgg gctgcgggta ggagccgacg accgtggtct gcagcagcgg
     4261 cgccggcatg tcattgcacc ttgatgccgg cctgcttcac cagctcggcg ttttccttga
     4321 gctcgcgggc aatcgtcttg tcgagatcgg cgggcgtggt gggcgaggca tcggcgccga
     4381 gcgcgcccag ccgttccttg acctcgggcg aggccaacgc cgcggcaacc tccttgttga
     4441 ggcgctcgac gatggcggtt ggcgttccgg tgggcgccag catgcccacc cagaaattgt
     4501 aggcgctgcc cttgtagccc gcttcctcgg tggtcggcac atcgggcagc accgacgagc
     4561 gcgcttcgct gccgacggcc agcgccgtca gccggccgtc gcgcaccatg ctgaggccgg
     4621 cgatgacggg cgcgaagaaa tagtcgaccc tgccgttcat cgtgtcggtc agcgcctcgg
     4681 gcgtgccctt gtagggcacg tgcagggcat cgatgccggc gcttatcctg aacttctcgg
     4741 cgttcatgtg agtgccgctg ccggtgccgg cggaggcaaa ggtgatcttg cccggctcgg
     4801 ccttggccgc cttcaccagg tcgcccacgg tcttccagcc cttggcgggc gaaaccacca
     4861 ggatgttggg ctgctgggcc agccggctga tcgccatcag gtccttggcc gtgtcgtagg
     4921 acaggctggg atagatcgag ggattgacgg tgtgggccga cgaattgacc agcagcgtgt
     4981 agccgtccgg cgctgccttg gcgacctgcg cggtgccgat ggtgccaccg gcgccgggct
     5041 tgttctccac caccaccggc tggccgaacc ggatcgacat cgaccgcgcc accgcgcgcg
     5101 ccaccacgtc ggtggcgctg cccgcggtga acggcacgat cactcgaatc ggcttgtcgg
     5161 gataggtctg ggcgtgcgcc gttggcgcgg cgaggatggc gatcgccgca atcatcaaaa
     5221 gacgcatggg gttcctcctg ttcggtttca ttgagcgacg acctgccggc tgacgctttt
     5281 gatgtcgagt tgggcgagga tgcgctcgcc tgacgccgcc aggcggcggc gaatcgtacc
     5341 gaggtcggag cgcagcagct tgccgtcgcg cttggcgaac tttccggcga ccagcacgtc
     5401 gcgcacccgt gcgcccgagc cctgcatgac gaccgaggcc acggcatcgt gcaccggcca
     5461 catggcgagc gggcccagcg acatcacggc gatgtcggcc tgcttgccgg gtgtgaggct
     5521 gccgatgcga tcgctcatgc ccagcatcgc cgcacctcgg gtcgtgatcc agtcgagcgc
     5581 ctcggccgcc ggcacggtcg aggtcgcggg aatgccgccg ctgctggcgc gttccgctgc
     5641 gttgtcgagg gcgcgctggg aggcgagcgt catgcgcgcc accgtgaaca tgtcgccacc
     5701 gatcgccgat tcgagatcga cgccgaccga cggtcctgag cccagcgcgc gcagccggcc
     5761 ggtgatcgga tggccatggc cttgcgtcat ctcgttctcc ggcgtgaccg agaagctgac
     5821 gcctgcctcg acgaaggctt ttagctgggc gtcggtgagg ttgttgccgt gcacgatgtt
     5881 gatgtgcggg ccgaccaggc tgcgcgccat cagggcctcc cagccgcccg gagtcttggc
     5941 ctcgccgccg ccctggtgca tcgaggcgat gaggccgagc tccctggcca gcgcgaaatc
     6001 gtggacgctc acctcgagcg tcgaatagtg gggccccagc accgccatgc cgagcgtgac
     6061 cagcgcgctg cggtcgctga gtgggccctg cagcaggcgc tcgatctccg cgcgcggatg
     6121 gggcacttcc gaaaaatgcg gctcgcccgg cttggcatcg ggtttcggcg agccgtggaa
     6181 gaaggcggcg cggatgccgc tgtctttcag gccggcgatg ccggcgtcgg tatgctcggg
     6241 cgtcggattg ttgtggcacc agtcgaccag ggtcgtcacg ccatggtcga gctggttcag
     6301 cgcgccggcc aaggtggcga tgtggatgtc gtcgggcacg aagaccgtcg ccaggccggc
     6361 atgcacgtgg cggaaatatt ccagcaaggt ccagttggcg gcgaccgagc gcaacgccgt
     6421 ctgccaggtg tgcatgtggg cgttgatcag tccgggcagc acgaagtggc cggcgcagtt
     6481 gatggtttcg gcatcggcag ccagcgaggg ggcaatggcg gcgatgcggc cgtcctcgac
     6541 cagcacgtcg ccggccggca acacgccgag cttgcgatcc tgcgtgacga cgatgccgga
     6601 tttgaggagg agtcttttca ttggactgcg ggaggccagg ctcccctcat gtcatcctga
     6661 gcgcagcgaa ggatctcatg ccgtatcaag cggcgatgag gtccttcgct gcgctcagga
     6721 cgacagttat tgcagtccat cgctcacctt gacgttctcg ggctcgagtt tcatgccggc
     6781 ggcgcgcgcc agctcgagca acagcacgga gaagtcgatg tcgccgggat attgatgcga
     6841 cagcgacagc acgctgtcgc gcgtcaccga ggcggtcggc atcacgacgc cgaaagactt
     6901 ggcggccgcc atgccgagct ccatgtcctt gagcaggagc ttgggcgtga aggtggtcgt
     6961 gaagtcgaga ttgaccagcg ccggcgtctt gtacttggtg tacatcgagc ccagcacgct
     7021 ttggttgatc gattccagga acaggtggcg cgggatgccg gccttctccg cgagcagcgt
     7081 gatctcgcac aacgactgga tgatcacccc gaacatggtg ttgtgggcga tcttccacac
     7141 ccgcgcgagc tcgccttcgc cgacatacat cgccgcccgt cccagcgccg ccagcaacgg
     7201 ctggacggcg tcgtactcgg ccctggggcc ggaggccacg accagaagct tgcccgcctt
     7261 ggcgaccttg gcgttgcccg agaccggcgc gctcaaatag gcgacgccgg cgtcgctcag
     7321 gcctttgcgg atctcggccg agccgtggtc ggagatcgac gacatgtcga ccacgcgctt
     7381 gggccgcgcg ttgccggtca gaacgccgcc ggcgccgaac aggatgtcct tcaggtcgtc
     7441 ggtggtggag accatggtga acaccgtggc gcagtgcgcc atcgccgcct tgtcggtcac
     7501 cacctccgcg ccgatcttgg ccaagggatc ggccttggac gccgtgcgat tccacaccga
     7561 aagcccatgg ccagctttga ccaggcgcgc ggccatggcc tcgcccatgc ggcccagccc
     7621 gatccagccg atatcgtgcg acgctttgct gctcatgcga aggaaccccg taccacggac
     7681 cgcgtttgga ttgtcccgca gtttggaagg ggatttagtc gctgtccatg tccgtgacct
     7741 tcccgcgcgc ggcgcgccgg cttgccaacc tcgtgctgtt cggcctcctc gtctcctgca
     7801 ccggcgagct gcccaacagc gccatcccgg ccaaccaggc ggagcgctac tacagcctct
     7861 ccgcgacgac gccgatcgtc gccttgatcc gcgagcgtga catcaagacg cccgacgaat
     7921 catcgccggt gcctttgctc gagcagctgc gccgcgaact cgccaaaagc gaccccagcg
     7981 gcgccttcgc cggcattacc tacgatctca gcgccggcaa cacgctgccg aatgactggc
     8041 tggtccagag tccgacgcga tggggccatc gcgccgacga cctgccgttc tatccgctcg
     8101 cctgcaagga ctgcgagcgc gatgtcttgc tgccgtcctg cagcagcgac gccgactgcc
     8161 cgaatggcgg gacgtgccgc acgatctggg ccgccacgcc gagcgcgcgg ccggccaggc
     8221 gcaatgtctg cttcggccat tccgacgccc tgctgctgcc ggtgcacgac ctgatcgcca
     8281 atgcacgacg ctcggtcgac atcgccgccc tccagccggt gcccggcaca cgctttcttg
     8341 ccgccctgcg cgcagggctc aacacgctcg cagcgaccgg ccggccggcc gcggttcgcc
     8401 tcgtcatcgg ccagtatccg ccggacggcg tcgacgccgc cgcgctgctg tcgtccctta
     8461 cgtcggacct gcgcgacatt ccaggcgcgc ggctcaccgt cagcgttgcc gccatgcgct
     8521 cccacagctt ctcctggccg cacgccaagt tcatcgccgt cgacggccgc gaggtcgagg
     8581 tcggcggcca caatctctgg tcggaagact acctggtcga cgaaccggtg cacgatctct
     8641 cgatgcgggt gcgtgggccg gccgcggcga gcgcgtcgcg cttcgctgat cggctgtggc
     8701 aattcgtctg cacccatctc gacaaaaagc cgtcggtcca actcgcgacc tttgccagcg
     8761 ggcaaagcgt ggcgccgggc gcttgccccg atgccttcgc gccgccggct gccggtcggc
     8821 cagcggttgg cggattgccg atccttgcgg tcggccgcct gggcgccggc atcaccgccg
     8881 acttcgccag ccagagcgag ctggcgcgcg acctggcgtt cggcgcggcg cgccacagga
     8941 tcctgctctc gcagcaggac atcggcttta tccttggccg cgccgacccg atctttcccg
     9001 agagcacgct cgaccgcctt ctcgacttca tcgagcagcg cgacggccac gtctacatcg
     9061 tgctgtccaa ccccggcgcg gccggcaaca gcggcagcac ctattccaac gaggtcagcc
     9121 tggccgcgct cgcgcgccat ctgcgcgcca tggtgcagaa gagggtcgac gcgcgcgacc
     9181 ccaaggagcg ctacgaaatc cgcaaaggac ccgatccggt caacgcgctg ctgtgcagcc
     9241 acgtccacct ggcaccattg cgtttcggac ccgacgccac ctggcccggc ggcaaggcga
     9301 tcggcaatca cgccaagctc tggatggtcg acgatcgcgt cttctatatc ggctcggaca
     9361 atctctatcc ggtcaatctg caggagttcg gctacatcgt cgacgacccc aaggccgccg
     9421 ccgagctgat cgacgactac tggaatccgc tgtggcaatg gtcgcagcgc gccgcggtct
     9481 cgggcgaggg agtcgagccc tgcatctttc gcacgccgca aaagtaagct ttttgtcagc
     9541 gaaatgtaac gacggtgtgt cagcgctcag taatcgcgtg gccgcattga ggccgccatc
     9601 gggcactacc tcgacatcgc tcgatcacga gcatggaggt agacatgatt gcgaacctga
     9661 agtggctgat gcctctggtt gccgtcgggc taccgttggc ggcgtccgcc cagatcagcg
     9721 atgccacgta ttgccggagg ctcaccgctc gctacgaggc attcgtcgaa aacatgaacg
     9781 gccatagcct ccagccgggc agcctcgacg gccaggtggc cgtcgagcag tgcaaggaag
     9841 gcaatacggc cgccggcatc cccgtcctcg agcgcaagct gcaggacgcc aagatcgctc
     9901 tgcccaagcg cagctaatgg catgccagat cgatcggggc gaccgccccc tcagtcgccc
     9961 cggttgccgt cagcttgttg ttaggtcatt gacgtaacgt catgagatca atccattggc
    10021 tgttgccggc cgcaacgatc ctgatgccgc tggcggcatc ggcacagatg agcgatgccg
    10081 cctactgcaa ggcgctgacg caaaagtacg aagtctacat tttcaccacg tcagtcggcc
    10141 gctcgcccgg cgtggggacg gtcgacggca gcgttgccat cgagcaatgc aaggccggca
    10201 acaccgccac cggtattccc gttctcgaga agaagctgcg caacgccagg atcgatctgc
    10261 cgtcccgcgg ataggggcta agcgggcacg ggatcaatcg gtgtcaccac gccttcggcc
    10321 gcctcgatca cttcgccggc gtcgaggcag agatcctcgc ggttgcgcat ggccatgatc
    10381 tggatgccgg tgcgcagctt gccgtggctg ccgaccggca cggccaggcc gggcagccca
    10441 agcagcgggg cgaggagggc g
//
LOCUS       DASWGA010000544         4477 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1205680, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000544 DASWGA010000000
VERSION     DASWGA010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4477
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1205680"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VF991_12895"
     CDS             complement(<1..779)
                     /locus_tag="VF991_12895"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEX9557389.1"
                     /translation="MIQVPRDDRSVIGQWWWTVDRWSLGAVLGIMAFGVLLTLAASPP
                     AAERIGADSFVFAKRQFLFLPVALLLMLAISLSSPRHVRRLALLVFCGSIVLLAATFV
                     IGIEIKGARRWINVPGLSSMQPSEFVKPSLAVISAWLLAQSRTERRAPGYILSTLLVG
                     GVLALLVLQPDLGMSIVVALVWAAQLFVVGLPMWVAGFGAVGGAAALVGAYFMFGHVR
                     SRFDRFLDPSSGDNYQVNTSLEAFMNGSLFGRGPGEGTVKA"
     gene            complement(776..2164)
                     /gene="murD"
                     /locus_tag="VF991_12900"
     CDS             complement(776..2164)
                     /gene="murD"
                     /locus_tag="VF991_12900"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019905494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEX9557390.1"
                     /translation="MIDLGVLKGSSFVVLGLARSGLATVRALKAAGIDCVAWDDSAGS
                     RAEAAKAGVAVVEPASIDWPRTTALIISPGIPSRLPKPHPVTAAARAAGKKIVCDIEL
                     LARAQSEAGFVGITGTNGKSTTTALIGHILAQAGRRCEVGGNIGRAALDLAPLGDDGI
                     YVLELSSYQLELLETFRANVAVWLNITPDHIDRHGDLAGYVAAKENIFVRQQPGDCAV
                     IGVDDRPSRAVYARISARAGIAAVPIQLERPVAGGVSFRAGMLVDADGYSVDFSDVPT
                     LPGDHNAQNAACAWAACRWLDVPREKIVAGLKTYPGLPHRQERVAAVGNVVYINDSKA
                     TNADATARALSSYRDIYWILGGQAKEGGVAPLAPWFDRIRHAFLIGEATELFAAQLEG
                     KLAYSRCGDLKSALDAAHQRAQHEAHGTAVVLLSPACASWDQWRSYEHRGDAFRAMAR
                     ALPGAKSLGRAA"
     gene            complement(2169..3260)
                     /gene="mraY"
                     /locus_tag="VF991_12905"
     CDS             complement(2169..3260)
                     /gene="mraY"
                     /locus_tag="VF991_12905"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEX9557391.1"
                     /translation="MFYNLLYPLADVFGPFNLFRYITFRSIGAFLTALVLSFLIGGGL
                     IRWLRSKQKQGQPIRDDGPASHLINKKGTPTMGGLLILITLTAATVLWADLTNRYIWI
                     VLGVTLVFGAVGFWDDFLKVTKRNPKGVPGLLKLFLSVLVAASAAWQIAQSSPAPLRY
                     MMALPFLKDVLWPLGVAGFMVFAILVMVGASNSVNLTDGLDGLAIGPVIMASAVFGLI
                     AYVVGNTILTNYLYLHHIPRSGELAVLLAALVGAGLGFLWFNAPPAQVFMGDTGSLAI
                     GGALGAVAVVTKHEIVLAIVGGLFVLETVSVIVQVVSYRWTGRRVFRMAPLHHHFEQK
                     GWSEPTIVFRFWIIAAILAMAGLATLKLR"
     gene            complement(3425..>4477)
                     /locus_tag="VF991_12910"
     CDS             complement(3425..>4477)
                     /locus_tag="VF991_12910"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX9557392.1"
                     /translation="DALRVMLAAQAKTSASAASFNNHVGVPISVARLPRDARYGVFEI
                     GMNHPGEIEPLARQVAAHVGVITNVGPVHIGHMGSEEAIADEKGCLFAGMADGAVAVL
                     NRDSRHYERLAGQARRFGVTRIVGFGRGEAAEARLLSCNLQDWGSDVTALIDGQRIEY
                     RLGAAGEHWVLNSLAALAVVEALGANVVEAAASLASIGASPGRGARRRLKFGAGTVEL
                     LDESYNANPVSMRAMLAVLARTEPADGGRRLLAMGDMRELGEEADAYHAGLADAVAAS
                     GAAQVFLCGPHMQALWPLLAPAQSGVHRPDSASLAGAVAGALRTGDVIAVKGSLGSKM
                     KIVVDAIVAASGGEER"
BASE COUNT          786 a         1538 c         1536 g          617 t
ORIGIN      
        1 tgcgccttca ccgtgccctc gcccgggccg cggccgaaca gcgagccgtt catgaacgct
       61 tcgagcgagg tgttgacctg gtagttgtcg cccgacgagg gatcgaggaa gcggtcgaag
      121 cggctgcgca cgtggccgaa catgaaatag gcgccgacca gcgccgccgc gccgccgacc
      181 gcgccgaagc ccgcgaccca catcggcagg ccgacgacga agagctgggc ggcccacacc
      241 agcgccacca cgatgctcat gccgaggtcg ggctgcagca ccagcagcgc cagcacgccg
      301 ccgaccagca gggtcgacag gatataaccc ggcgcccgcc gctcggtgcg gctctgcgcc
      361 aacagccagg ccgagatcac ggcaaggctg ggcttgacga actccgaagg ctgcatgctc
      421 gacaggccgg gcacgttgat ccaacgccgg gcgcccttga tctcgatgcc gatgacgaag
      481 gttgcagcca gcagcacgat gctgccgcag aacaccagca gcgccagccg gcggacatgg
      541 cgcggcgagg acaacgagat cgccagcatc agcaggagcg ccacgggcag gaacaggaac
      601 tggcgcttgg cgaatacgaa ggaatcggcg ccgatgcgct cggcagccgg cggcgaggcg
      661 gccagcgtca gcagcacgcc gaaggccatg atgccgagga cggcgcccag cgaccagcgg
      721 tcgacggtcc accaccattg gccgatgacg ctgcggtcgt cgcgcggaac ctggatcacg
      781 ccgccctccc caagctttta gcccccggca gggcgcgcgc catggcgcgg aacgcatcgc
      841 cacgatgctc gtagctccgc cactgatccc acgacgcgca ggccggcgac agcaggacca
      901 cggccgtgcc gtgcgcctcg tgctgcgcgc gctggtgtgc agcgtcgagc gccgacttca
      961 agtcgccgca gcggctgtaa gcaagcttgc cctcgagctg ggcggcgaac agctcggtcg
     1021 cctcgccgat caggaaggca tggcggatac ggtcgaacca gggcgcaagc ggcgccacgc
     1081 cgccttcctt cgcctgaccg cccaggatcc agtagatgtc gcggtaggag gatagcgcgc
     1141 gcgccgttgc gtcggcgttg gtcgccttgc tgtcgttgat gtagacgacg ttgcccaccg
     1201 cggccacgcg ctcctggcgg tgcggcaggc cgggataggt ttttaggccc gccacgatct
     1261 tctcgcgcgg cacgtcgagc cagcggcagg ccgcccaggc gcacgccgcg ttctgcgcat
     1321 tgtggtcgcc cggcagggtc ggcacgtcgg agaagtcgac cgaatagccg tcggcatcga
     1381 ccagcatgcc ggcgcggaac gacacgccgc cggcaaccgg gcgttccagc tggatcggca
     1441 cggcggcgat gccggcgcgc gcggaaatcc tggcatagac ggcacgcgag ggccgatcgt
     1501 cgacgccgat caccgcacag tcgccgggct gctggcggac gaagatgttc tccttggccg
     1561 cgacgtagcc cgccaggtcg ccgtgacggt cgatatggtc gggcgtgatg tttagccaga
     1621 ccgcgacgtt ggcgcggaag gtctccagca gctcgagctg ataggacgac agttccagca
     1681 cgtagatgcc gtcgtcgccg agcggcgcca ggtcgagcgc ggcgcggccg atattgccgc
     1741 cgacctcgca gcgccggccg gcctgggcga ggatatggcc gatcagggcc gtggtggtcg
     1801 acttgccgtt ggtgccggtg atgccgacga agcccgcctc cgattgcgcg cgggccaaaa
     1861 gttcgatgtc gcagacgatc ttcttgccgg cggcgcgcgc cgccgccgtg acgggatgcg
     1921 gcttgggcag acggctcgga atgccggggc tgatgatgag cgccgtcgtg cgcggccaat
     1981 cgatggacgc cggctcgaca acggcgacac cggccttggc cgcctccgcg cgcgagccgg
     2041 cactgtcgtc ccaggcgaca cagtcgatcc cggcggcctt gagcgcccgc acggtcgcca
     2101 ggccggagcg cgccagcccc agcacgacga acgacgaacc cttcagcacg ccaagatcga
     2161 tcatcggctc accggagttt caaggtggcg aggccggcca tcgccaggat cgcggcgatg
     2221 atccagaagc ggaagacgat cgtcggttcg gaccagccct tctgctcgaa atggtgatgc
     2281 agcggcgcca tgcgaaagac gcgacggccg gtccaacgat aggacacgac ctggacgatg
     2341 accgacacgg tctcgagcac gaacaggccg ccgacgatgg ccagcacgat ctcgtgcttg
     2401 gtcacgaccg ccaccgcccc cagggcgccg ccgatggcga gcgagccggt gtcgcccatg
     2461 aacacctggg cgggcggcgc gttgaaccag agaaagccca gcccggcgcc gaccagggcg
     2521 gcgagcagca cggcaagctc gccggaacgc gggatgtgat ggagatagag atagttggtg
     2581 aggatggtgt tgccgaccac gtaggcgatc aggccgaaaa cggcggatgc catgatcacc
     2641 ggcccgatcg ccaggccgtc gagtccgtcg gtcaggttga cggaattgga ggcgcccacc
     2701 atcaccagga tggcgaagac catgaagcct gcgacgccga gcggccacag cacgtccttg
     2761 aggaacggca gcgccatcat gtagcgcaag ggcgccggcg aggactgggc gatctgccag
     2821 gcggccgagg cggcaacgag caccgacagg aagagtttca gcaggcccgg cacgcccttg
     2881 ggattgcgct tggtgacttt caagaagtcg tcccagaagc cgacggcgcc gaagaccagg
     2941 gtgacaccga gcacgatcca gatatagcgg ttggtgagat cggcccacag cacggtggcg
     3001 gccgtgaggg tgatcaggat cagcaggccg cccatggtcg gcgtgccctt cttgttgatg
     3061 agatggctgg ccgggccgtc gtcgcggatc ggctgcccct gcttctgctt gctgcgcagc
     3121 cagcggatca gcccaccgcc gatcaggaag ctgagcacga gcgccgtcag gaaggcgcca
     3181 atcgagcgga aggtgatgta gcggaacagg ttgaagggac cgaagacgtc cgccagcgga
     3241 tagagcaggt tatagaacat cctagcgtct ttccggcgaa tacacctcac cctgaggagg
     3301 ccgcgcagcg gccgtctcga agggtgggaa cgcgcacgtc ctttggccca tgcttcgaga
     3361 cgctcgcgcc gctcgctcct cagcatgagg tctttgtcgt aagccggatt tgagccaacg
     3421 cattctagcg ttcctcgccg ccgcttgccg ccacgatggc gtcgacgaca atcttcattt
     3481 tcgatcccaa cgatcccttc accgcgatca cgtctcctgt cctgagcgcg ccggcaaccg
     3541 caccggcgag cgacgccgag tccgggcggt gcacgccgct ctgcgccggc gccagaagcg
     3601 gccacagcgc ctgcatgtgc gggccgcaca ggaagacctg cgctgcgccg ctcgccgcca
     3661 ccgcgtcggc aagcccggcg tggtaggcgt ccgcctcctc gcccagctcg cgcatgtcgc
     3721 ccatcgccag cagacggcgt ccgccatctg ccggctcggt gcgcgccagc accgcgagca
     3781 tcgcccgcat cgacaccgga ttggcattat agctctcgtc caagagctcc accgtgccgg
     3841 cgccgaactt gagccgccgg cgcgcgccgc gacccggcga cgcgccgatg ctggccaggc
     3901 tcgccgccgc ctcgacgacg tttgcgccca gcgcctcgac gacggccagc gccgcaaggc
     3961 tgtttagcac ccaatgctcg cccgccgcgc ctaggcgata ctcgatccgc tgcccatcga
     4021 tcaaggccgt gacgtcgctg ccccaatcct gcaggttgca ggaaagaagc cgcgcctcgg
     4081 cggcctcgcc gcggccgaaa cccacgatgc gcgtcacgcc gaagcgccgc gcctggcccg
     4141 ccaggcgttc gtagtggcgg ctgtcgcggt tgagcacggc cactgcaccg tccgccatgc
     4201 cggcgaacag gcagcccttt tcgtcggcga ttgcctcttc cgagcccatg tggccgatat
     4261 ggaccgggcc gacattggtg atcacgccga catgggccgc gacctggcgc gccagcggct
     4321 cgatctcgcc gggatggttc atgccgatct cgaacacgcc gtaacgcgcg tcgcgcggca
     4381 ggcgggcgac gctgatcggc acgccgacat ggttgttgaa ggaggccgcg ctggccgagg
     4441 ttttggcctg agcggccagc atgacgcgca aggcgtc
//
LOCUS       DASWGA010000545         1711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_695915, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000545 DASWGA010000000
VERSION     DASWGA010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_695915"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VF991_12915"
     CDS             complement(<1..285)
                     /locus_tag="VF991_12915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557393.1"
                     /translation="MLDDDNAGNSASSLKTPTKTKGKTKQLSRRAVLKAGAVATGAAI
                     GSDVVRGFPTIWAQEIKDIELRHVGVSYSVVKAIGDQAAKDLGFKVTMQNL"
     gene            575..>1711
                     /locus_tag="VF991_12920"
     CDS             575..>1711
                     /locus_tag="VF991_12920"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX9557394.1"
                     /translation="MRKAEGHKRVVTSRSRAIITVTILTLLVAPTVLRAQTIPGAQAE
                     STSALSRGEWPAYAGTYAAARYSPLTQIDRTNAKDLHVAWRWKSPDQAVKDANPKVGP
                     SRANESTPLMVGGTLYTSTSLSQVAAIDAASGETKWVFDPKIYENGLGIPANDGWLHR
                     GVGYWRSGDDERIVMLTAFAQMIALDAKTGKPVPTFGTDGRVDLALGMPRPVDRDYYT
                     MSSPPVIVRGVIVVGSSVMDWWGHRPSPPGDVRGFDVVSGRLLWTFHTVAQAGEPGVE
                     TWEKDSWKEAGNANVWAPMSADEELGYVYLPVSTPTNDYYGGHRPGDGLYGESLVCLD
                     AATGKKVWHYQLVHHGLWDYDSPAAPNLIDITVAGKPIKAVAQVT"
BASE COUNT          321 a          541 c          528 g          321 t
ORIGIN      
        1 caggttctgc atggtgacct tgaagccgag gtcctttgca gcctgatcgc cgatcgcctt
       61 gaccaccgaa taggacacgc cgacgtgtct taattcgata tccttgatct cctgcgccca
      121 gatcgtcgga aagccgcgga cgacatcgga gccgattgcg gcgcccgtcg ccacggcgcc
      181 ggccttgaga accgcgcgcc gtgaaagttg cttggtcttt cctttggtct tcgttggggt
      241 cttcaacgaa gatgcgctat taccagcatt gtcatcatcc aacataacta tctccgttgc
      301 gtgttgatgg actaacgctc gcggcaagac ggctctttct cgcgaccgtg tcgacggaag
      361 cgaggtaacg acagggaaat cggcttgtaa aatcggaagt agaaatgcga gccataaggg
      421 ctgctgatgg tgtccgcgtt tgcctgccgc agcggcacat cacacctaaa ttttgacctt
      481 tacttcccga attcaactgc gcccgacctg ttctcctttg actgcgcgcc cgttctcgga
      541 gatgcttgcc gaaaagcacg gggagggtac ggcattgcgc aaagcggaag ggcacaagcg
      601 ggtcgtcacg tcgcgcagcc gcgcaatcat cacggtcacc attctgacgc tgttggtcgc
      661 gccgaccgtg cttcgtgcac agaccatccc cggcgcgcag gcggaatcca ccagcgcgtt
      721 gtcgcgcggc gaatggcccg cttatgccgg cacctatgcc gcggcccgct attcgccgct
      781 cacccagatc gaccgcacca acgcgaagga ccttcacgtc gcctggcgct ggaagtcgcc
      841 ggatcaggcg gtcaaggacg ccaatccgaa ggttggtccg agccgtgcca atgaatcgac
      901 gccgctgatg gtcggcggca cgctctatac ctccacgtcg ctgtcgcagg tcgccgccat
      961 cgatgccgcg tcaggcgaaa ccaaatgggt gttcgacccg aaaatctacg agaatggtct
     1021 cggcattccc gccaacgacg gctggctgca tcgcggcgtc ggctattggc gcagcggcga
     1081 cgacgaacgc atcgttatgc tcacggcgtt tgcgcagatg atcgcgctcg atgccaagac
     1141 tggaaagccg gtgccgacat tcgggaccga tggccgtgtc gatctcgccc tgggcatgcc
     1201 gcggccggtc gaccgcgact actacaccat gagttcgccg ccggtgatcg tgcgcggggt
     1261 gatcgtggtc ggctcatcgg tgatggactg gtggggacat cggccgtcgc cgcccggcga
     1321 tgtgcgcggc ttcgatgtcg tcagcggccg tctgctctgg accttccaca ccgtggcgca
     1381 agcaggcgaa cccggcgtcg agacctggga gaaggattcc tggaaggaag ccggcaatgc
     1441 caatgtctgg gcgccgatga gcgccgacga ggagctcggc tatgtctact tgccggtcag
     1501 cacgccgacc aacgattact acggcggcca ccgtcccggc gacggcctct acggcgagag
     1561 tctcgtgtgc ctcgacgcgg cgaccggcaa gaaggtctgg cactatcagc tcgttcacca
     1621 cgggctgtgg gattacgact cgccggccgc ccccaacctg atcgacatca ccgtggcggg
     1681 aaagccgatc aaggcggtcg cgcaagtaac a
//
LOCUS       DASWGA010000546         5569 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_576393, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000546 DASWGA010000000
VERSION     DASWGA010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5569
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_576393"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1172
                     /locus_tag="VF991_12925"
     CDS             <1..1172
                     /locus_tag="VF991_12925"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX9557395.1"
                     /translation="YAERGVPTVRDFPEAASALRGFNASAVRIAPDGRLMLSAAVPVQ
                     RYKQVLGALMLMRDNRAIAASLREVRYDMMVIAAAALGITVLLSLYLAGTITQPIVRL
                     ARAADEVRLARENRPEIPDLGKRGDEIGDLNDALRSMTDALWQRINTIESFAADVAHE
                     LKNPLTSLRSAIEMAVRPNLEPERRDKLMAIVMDDINRLNRLISDISDASRLDAELMR
                     GEVKPVDLHALLSDMVRHYAVTAVQKAGVEVEFRLAANPPFAAHGHDGRYGQVFRNVI
                     DNALSFSPPGSRIVIELSREPRGGPFVVTIDDEGPGIPEDNLESIFERFYSERPTEHF
                     GQHSGLGLSICRQIMETYGGSISAANRRAPGNGPGGGRVLGARFTIRVPAADKRK"
     gene            1169..1612
                     /locus_tag="VF991_12930"
     CDS             1169..1612
                     /locus_tag="VF991_12930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphatase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9557396.1"
                     /translation="MTERVHATCIALRSGRRWWAALLRGPSGAGKSDLALRLIEGGGR
                     LVADDQTELVRKGKSVIASSPARIAGLIEARGIGIVKLARDQLVARAPVVLLVDLASA
                     ERVERLPQQARERLLGIDLPVLVLAPFEASASAKLRLALARIAAA"
     gene            1630..2574
                     /gene="rapZ"
                     /locus_tag="VF991_12935"
     CDS             1630..2574
                     /gene="rapZ"
                     /locus_tag="VF991_12935"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEX9557397.1"
                     /translation="MPDSPASSLPAASHDTPRPFVVVTGLSGAGRVTALHALDDMGYV
                     AVDNVPLPLLGDLMRSTTGNPGEMAAPLAFGIDTRTYGFDPHDLVQRVQRLRERRDIR
                     ASLLFLDCDSETLQRRYTESRRPHPLAPDRPLVDAIGEERRRIGWVRDSADVVIDTSA
                     LSPHQFKQLLTGHFALGRSAGTRLSLMSFSYRRGLPREADLVFDVRFLKNPHYEPTLK
                     PLTGRDPAVAAYVASDPGYRPFLDGLKGLVGPLLPRFDAEGKSYLTIAIGCTGGRHRS
                     VAIAEELADWLRGAGRSVTLSHRDAEVAGEAGGAGADG"
     gene            2571..2975
                     /locus_tag="VF991_12940"
     CDS             2571..2975
                     /locus_tag="VF991_12940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX9557398.1"
                     /translation="MIGIVLVTHGNLAREFLAALEHVVGPQQGVSTVCIGADDDMEKR
                     RAEILESARSCDTGEGVIVLTDMFGGTPSNLAISIMEQARIEVLAGVNLPMLVKLASV
                     RSRPIAEAVRMAQEAGRKYITVASRILAKEAS"
     gene            2972..3280
                     /locus_tag="VF991_12945"
     CDS             2972..3280
                     /locus_tag="VF991_12945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEX9557399.1"
                     /translation="MSDTASQGADAGIGTLRRTLPIANKRGLHARAAAKFVRMAGQFD
                     AMVRVSFKSQEVSGLSIMGLMMLAAGIGSEIELSCSGRQAIEAMAALSALVEGKFGED
                     "
     gene            3529..4923
                     /gene="ahcY"
                     /locus_tag="VF991_12950"
     CDS             3529..4923
                     /gene="ahcY"
                     /locus_tag="VF991_12950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEX9557400.1"
                     /translation="MAQDYVVKDIGLADWGRKEIDIAETEMPGLMAIRKEYGPKKPLK
                     GARIAGSLHMTIQTAVLIETLRALGADVRWASCNIYSTQDHAAAAIAKAGTPVFAIKG
                     ESLEDYWDYTHKIFEWGDGGEPNMILDDGGDATLLIHLGMRAEKDASLIAKPTNEEEE
                     VLYKAIARTNKQKPGWYAKLGAAIRGVTEETTTGVHRLYQMEKDGRLLWPAINVNDSV
                     TKSKFDNLYGCRESLVDGIRRGTDVMMAGKVAMVAGFGDVGKGSAASLRQAGCRVMVS
                     EIDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNVDVITLDHMKAMKHRAIVCNIG
                     HFDSEIQIASLRNFKWHNVKPQVDEIEFPDGKRIIVLSEGRLVNLGNATGHPSFVMSA
                     SFSNQTLAQLEIFTNPGKYQKKVYTLPKTLDEKVAALHLAKVGAKLTKLRADQAKYIG
                     VPEAGPFKGDLYRY"
     gene            4969..5412
                     /gene="tsaE"
                     /locus_tag="VF991_12955"
     CDS             4969..5412
                     /gene="tsaE"
                     /locus_tag="VF991_12955"
                     /inference="COORDINATES: protein motif:HMM:TIGR00150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEX9557401.1"
                     /translation="MPTFSFSLPDEAATERLGTALAKRLRPRDVVALQGGLGVGKTTL
                     ARAILRAAAGDPSLVVPSPTFTLVEVYDTSRGTFWHFDLYRLEEPDQVFELGWEEARA
                     DGIALVEWAERLGRLLPRERLTVMLAVEGDGRRADLQGEARFGEL"
BASE COUNT          937 a         1896 c         1836 g          900 t
ORIGIN      
        1 aatatgccga acgcggcgtg ccgacggtgc gcgatttccc cgaggcggcg agcgcgctca
       61 ggggcttcaa cgcctcggcc gtacgcattg cgcccgacgg ccgcctgatg ctgagcgccg
      121 ccgtgccggt gcagcgctac aagcaggtgc tgggcgccct gatgctgatg cgcgacaacc
      181 gcgccatcgc cgcctcgctg cgcgaggtcc gctacgacat gatggtgatc gccgccgccg
      241 cgctcggcat caccgtgctg ctctcgctct atcttgccgg caccatcacc cagccgatcg
      301 tgcggctggc gcgcgccgcc gacgaggtgc ggctggcacg cgagaaccgg ccggagattc
      361 ccgacctcgg caagcgcggc gacgagatcg gcgatttgaa cgatgcgctg cgctcgatga
      421 ccgatgcgct gtggcaacgc atcaacacca tcgaaagctt tgccgccgac gtggcgcacg
      481 agctcaagaa cccgctgacc tcgctccgct cggcgatcga gatggcggtg cggcccaatc
      541 tcgagcccga gcggcgcgac aagctgatgg cgatcgtgat ggacgacatc aaccggctga
      601 accggctgat ctccgacatc tccgacgcct cgcgccttga tgccgaactg atgcgcggcg
      661 aggtcaagcc ggtcgacctg catgcgctgt tgagcgacat ggtgcgccac tatgcggtca
      721 ccgccgtgca gaaggcgggc gtcgaggtcg aattccggct cgccgccaac cctccctttg
      781 ccgcgcacgg ccatgacggt cgttacggcc aggtgttccg caacgtgatc gacaatgcgc
      841 tgtccttcag cccgcccggc tcgcgcatcg tcatcgagct cagccgcgag ccgcgcggcg
      901 gtccgttcgt cgtcaccatc gacgacgagg gccccggcat tcccgaggac aacctcgaat
      961 cgatcttcga acgcttctat tcggagcggc cgaccgagca tttcggccag cattcggggc
     1021 tcggcctgtc gatctgccgg cagatcatgg agacctacgg cggctcgatc tcggccgcca
     1081 atcggcgggc tcccggcaac ggaccaggag gcggccgcgt gctgggcgcg cgcttcacca
     1141 ttcgcgtgcc ggccgccgac aagcgcaagt gacggagcgg gtccatgcca cgtgcatcgc
     1201 gctgcgctca ggtcgccgct ggtgggcggc gttgctgcgc gggccgtcgg gcgccggcaa
     1261 gtcggacctc gctctgcgcc tgatcgaggg cggcgggcga ctggtggccg acgatcagac
     1321 ggagctggtc cgcaaaggca agagcgtgat cgcaagctcg cccgcccgga tcgccggcct
     1381 gatcgaagcg cgcggcatcg gcatcgtgaa gcttgcccgt gatcaattgg tggcgcgcgc
     1441 ccctgtggtg ctgctggtcg acctggcgtc tgccgagcgc gtcgagcgcc tgccccagca
     1501 ggcgcgcgaa cggctgctcg gcatcgacct gccggtgctg gtcttggcgc cgttcgaggc
     1561 gtcggcctcc gcaaagttgc gccttgcctt ggcgcgaatc gcggccgcat gatcgcgacg
     1621 gcttgagtca tgcccgacag ccccgcctct tccctgccgg ccgcttccca cgacacacct
     1681 cgcccgttcg tcgtggtgac cggcctttcc ggcgccggcc gcgtcaccgc gctgcatgcc
     1741 ctcgacgaca tgggctacgt cgccgtcgac aacgtgccgc tgccgttgct cggcgatttg
     1801 atgcgctcga ccaccggcaa tcccggcgag atggcggcgc cgctggcctt cggcatcgac
     1861 acccgcacct acggcttcga tccgcacgac ctggtgcaac gcgtgcagag gctgcgcgaa
     1921 cgccgcgata ttcgagcaag cctgctgttc ctcgactgcg acagcgaaac cctgcagcgc
     1981 cgctacaccg aatcgcgccg accccatccc ctggcgcccg accgaccgct ggtcgacgcc
     2041 attggcgagg agcgccggcg gatcggctgg gtgcgcgatt cggccgacgt ggtgatcgac
     2101 acctcggcgc tttcgccgca ccagttcaag cagctcctga ccggccactt cgcgctcggc
     2161 cgcagcgccg ggacccgcct gtcgctgatg tcgttctcct accggcgcgg tctgccgcgc
     2221 gaggccgacc tggtattcga cgtacgcttc ctcaagaatc cgcactacga gccgacactg
     2281 aaaccgctca ccggccgcga tcccgcggtc gccgcttacg tggcgagcga cccgggctac
     2341 cggccattcc tcgacgggct gaagggtttg gtcgggccgc tgctgccgcg ttttgacgca
     2401 gagggcaaga gctatttgac cattgccatc ggctgtaccg gcggtcgcca ccgttcggtg
     2461 gcgatcgccg aggagctggc agactggttg cgcggcgccg gccgctcggt cactctctcg
     2521 caccgggacg ccgaggtagc cggggaggct ggcggcgcgg gggcggacgg atgattggta
     2581 tcgtactggt gacccacggc aatctggcgc gtgaattcct cgccgcgctc gaacatgtcg
     2641 tcggtccgca gcaaggcgtc tcgacggtgt gcatcggcgc cgacgacgac atggaaaagc
     2701 ggcgcgccga gatcctcgaa agcgcgcgat cgtgcgacac cggcgagggc gtgatcgttc
     2761 tcaccgacat gttcggcggc acgccgtcga acctcgccat ttcgatcatg gagcaggcgc
     2821 gcatcgaagt gctggccggc gtcaacctgc cgatgctggt gaagctcgcc tcggtgcgca
     2881 gccggccgat cgccgaggcg gtgcgcatgg cccaggaagc cggccgcaaa tacattaccg
     2941 tcgcgtctcg catcctggcc aaggaagctt cgtgagcgac accgcgtcgc aaggcgcgga
     3001 tgccggcatc ggcacgctca ggcgcaccct tcccattgcc aacaaacgcg gcctgcacgc
     3061 ccgcgccgcc gccaagttcg tgcgcatggc cggccagttc gatgcgatgg tccgcgtcag
     3121 cttcaagagc caggaggtgt ccggcctttc catcatgggc ctgatgatgc tggccgccgg
     3181 catcggcagc gagatcgagc tgtcctgttc gggccgccag gccatcgagg cgatggccgc
     3241 cctgtcggcg ctggtcgagg gcaagttcgg cgaggactga agctttcctc ctgtggcctt
     3301 gaaggtccct cgggcttcgc cctcgggatg acagcgagcg tggatcacaa aactcctgtc
     3361 atcgcgcgcg gggtagtccc cgcgctgaag cgcagcgagg gacctttagg gccgcataaa
     3421 gcttggcaca tatcgccata aattcttgct tatatgcgca ttgggcgcgt tgaggcggca
     3481 cgggaccgct gataagacac cgacactctt tcatgccggg agcgccatat ggcccaggat
     3541 tacgtcgtca aggatatcgg gctcgccgac tggggccgca aggaaatcga catcgccgag
     3601 accgaaatgc cgggcctcat ggcgatccgc aaggagtacg ggccgaagaa gcccctgaag
     3661 ggcgcgcgca tcgccggctc gctgcacatg accatccaga cggcggtgct gatcgaaacc
     3721 ctgagggcgt tgggcgccga cgtgcgctgg gcgtcgtgca acatctactc gacccaggac
     3781 cacgccgcgg cggccatcgc caaggccggc accccggtgt tcgccatcaa gggcgaaagc
     3841 ctcgaggact attgggacta cacccacaag atcttcgaat ggggcgatgg cggcgaaccc
     3901 aacatgatcc tggacgatgg cggggatgcc acgctcctga tccatctcgg catgcgcgcc
     3961 gagaaggatg cgtcgctgat cgccaagccg accaacgagg aagaagaagt cctctacaag
     4021 gcaatcgcgc ggaccaacaa gcaaaagccc ggctggtatg ccaagctcgg agcggcgatc
     4081 cgcggcgtca ccgaggagac gacgacgggc gtccaccgcc tgtaccagat ggagaaggac
     4141 ggccggctgc tgtggcccgc catcaacgtc aacgactccg tcaccaagtc gaagttcgac
     4201 aatctctacg gctgtcgcga atcgctggtc gacggcatcc gccgcggcac cgacgtgatg
     4261 atggccggca aggtcgccat ggtcgccggc ttcggcgacg tcggcaaggg ctcggcggcc
     4321 tcgctgcgcc aggccggctg ccgcgtcatg gtctccgaga tcgatccgat ctgcgccctg
     4381 caggcggcga tggaaggcta cgaagtcgtc accatggagg atgcagcacc cagggccgac
     4441 atcttcgtca ccgccaccgg caacgtcgac gtgatcacgc tcgaccacat gaaggcgatg
     4501 aagcaccgcg ccatagtctg caacatcggc cacttcgaca gcgagatcca gatcgcgagc
     4561 ctgcggaact tcaagtggca caatgtcaag ccgcaggtcg acgagatcga gtttcccgac
     4621 ggcaagcgca tcatcgttct gtcggaaggc cgcctggtca acctcggcaa cgccacgggc
     4681 catcccagct tcgtgatgtc ggcctcgttc tccaaccaga ccctggcgca gctcgagatc
     4741 ttcaccaatc cgggcaagta tcagaagaaa gtctacacct tgcccaagac cctcgacgag
     4801 aaggtggcgg cgctccatct ggccaaagtc ggcgccaagc tgaccaagct gcgcgccgac
     4861 caggcgaagt acattggcgt gcccgaggcc ggccccttca agggcgatct ctaccgctac
     4921 tgatcgaccc acagaccgtc gtgttaagag tcggcatcgg agacatcgat gccgactttt
     4981 tcgttttctt tgcctgatga ggctgcaacg gaacgcctgg ggaccgcgct cgccaaacgc
     5041 ctgcgaccgc gcgacgtcgt ggcgctgcaa ggcgggctcg gcgtcggcaa gaccacgctg
     5101 gcgcgcgcca tcctgcgcgc cgccgcgggc gatccttcgc tggtcgtgcc cagcccgacc
     5161 ttcaccctgg tcgaagtcta cgacacgtcg cgcggcacct tctggcattt cgatctctac
     5221 cgcctggaag aacccgacca ggttttcgag ctgggctggg aggaggcgcg ggccgacggt
     5281 atcgcgctgg tcgaatgggc ggagcggctg gggagattgc tgccccggga gcggcttacg
     5341 gtgatgctgg ccgtcgaggg tgacggcagg cgcgccgacc tgcagggcga ggctcgcttt
     5401 ggcgagctct gagcgcgacc ggctgcgcgc cgaattcatc cgtcgcgccg gctgggccga
     5461 cgcccgcgaa cggctgctgg ccggcgacgc ctcgttccgt aaatactttc gcttggcgcg
     5521 agatggcggt acggcggtgg tcatggatgc tccgccgccg caggaagac
//
LOCUS       DASWGA010000547         1822 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1962017, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000547 DASWGA010000000
VERSION     DASWGA010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1962017"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VF991_12960"
     CDS             <1..455
                     /locus_tag="VF991_12960"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557402.1"
                     /translation="TGFLGASTSNIVLAVAVLLWPNSARVIRSQVLTLRERAYVEAAR
                     VTGASSWRILFVHIAPNILPLSFVYAAIAIGWAIITEASVSFLGFGDSTSVSWGMMLQ
                     DAFSSQALSRGQYAWFVPPGVCIILVVVAGFFISRGYEEVFMPRLRGR"
     gene            452..927
                     /locus_tag="VF991_12965"
                     /pseudo
     CDS             452..927
                     /locus_tag="VF991_12965"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            1123..1479
                     /locus_tag="VF991_12970"
     CDS             1123..1479
                     /locus_tag="VF991_12970"
                     /inference="COORDINATES: protein motif:HMM:TIGR01727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9557403.1"
                     /translation="MYAGQVIESGPVREVLARPRHPYTMGLRNAFPDLTSDALELVPI
                     SGSPPDLGDPPPGCRFAPRCPFVLTACTTSPALIADGGKQTHASACLRDNEADSLRKA
                     AMDPATWQRSSNFAMS"
     gene            1446..>1822
                     /locus_tag="VF991_12975"
     CDS             1446..>1822
                     /locus_tag="VF991_12975"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557404.1"
                     /translation="MATLVELRDVVKHFPVARSLGEVVRGEHPAVHALDGVSFDVASG
                     DAVAIVGESGCGKTTLGRLMLKLVEPTAGSIAFDGAPLAGLAGEGLRDFRRQAQLVFQ
                     NPFDALNPRFTIYRAVAEPLLNAG"
BASE COUNT          261 a          651 c          601 g          309 t
ORIGIN      
        1 tgaccgggtt cctgggggcc agcacctcga acatcgtgct cgccgtcgcc gtgctgctgt
       61 ggcccaactc ggcgcgcgtc atccgaagcc aggtgctgac cttgcgcgag cgcgcctatg
      121 tcgaggcggc gcgcgtcacc ggcgccagct cctggcgcat cctgttcgtg cacatcgcgc
      181 ccaacatcct gccgctcagc ttcgtctatg ccgccatcgc catcggctgg gcgatcatca
      241 ccgaagccag cgtcagcttc ctgggcttcg gcgattcgac cagcgtgtcg tggggcatga
      301 tgttgcagga cgccttttcc tcgcaggcgc tgtcgcgcgg ccagtacgcc tggttcgtgc
      361 cgcccggcgt ctgcatcatc ctggtcgtgg tcgcgggctt cttcatcagc cgcggctacg
      421 aagaggtctt catgccgagg ctgcgcggcc gatgatcctc gaggtcgacg gcctggaaat
      481 ccactacgac acccgggccg gcggggccag ggaagtggta cgtgcggtcg acggcgcgtc
      541 atttgccgtc cccgagggcc gcatcgtcgg cctggtgggc gaatcgggct gcggcaagac
      601 cacggcggtg cgcgccatca tgggcgtgct ggccgagaac ggcaggcagg ccggcgggcg
      661 cgtcgtcttc aagggcgagg cgctcgacga ggccgccacc cgcaagctcc ggtggcgcga
      721 catcgcctat gtgccgcaaa gcgccatgag ctcgctcgat ccggtctaca ccgtcggcgc
      781 ccagctcatt gaggttttaa ccaagcgcgg caacgaatcg ggccgcgccg cccgcgcccg
      841 cgcggccgaa ctgttcgacc tggtcggcct gagcgaaagc cggctggccg actatcccat
      901 cagttctccg gcggcatgcg ccagcgcgcc gcgatcgcca tggcgctggc gctcaaaccc
      961 agcctgttgc tggccgacga accggtgacg gcgctcgacg tcatcgtgca acgccagatc
     1021 ctcgacatgc tgcgcaccct gcaacagcgc ctcaggctct cgatggtgct ggtgacgcac
     1081 gacatcagcg tcgtcgccta tctctgcgac gatgtggtcg tgatgtatgc cggccaggtg
     1141 atcgagagcg gcccggtgcg cgaggtgttg gcgcggccgc gccatcccta cacgatgggc
     1201 ctgcgcaacg ccttccccga cctgacgtcg gacgcattgg agctggtgcc gatcagcggc
     1261 agcccgcccg acctcggcga tccgcccccc ggctgccggt tcgcgccgcg ctgccccttc
     1321 gtcctgacgg cctgcacgac aagccccgca ctcattgccg acggcggcaa acagacccac
     1381 gcctcggcct gcctgcgcga caatgaggcc gactctctcc gcaaagccgc aatggatccc
     1441 gcgacatggc aacgctcgtc gaacttcgcg atgtcgtaaa gcacttcccc gtcgcgcgct
     1501 cgctgggcga ggtcgtgcgc ggcgagcatc cggcggtgca tgcgctcgac ggcgtgagtt
     1561 ttgacgtggc ctcgggcgat gccgtggcca tcgtgggcga atcgggctgt ggcaagacca
     1621 ccctgggacg cctgatgctg aagctcgtgg agccgaccgc gggctcgatc gctttcgacg
     1681 gcgccccgct tgccggattg gccggcgagg gcttgcgcga cttccgccgc caggcccagc
     1741 tggttttcca gaacccgttc gatgcgctca atccgcgctt caccatctac cgcgccgtcg
     1801 ccgagccgct gctcaatgcc gg
//
LOCUS       DASWGA010000548         9627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1451011, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000548 DASWGA010000000
VERSION     DASWGA010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9627
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1451011"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..760
                     /locus_tag="VF991_12980"
     CDS             <1..760
                     /locus_tag="VF991_12980"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9557405.1"
                     /translation="QPLITVSKDNGVATVTLNRPEKLNALNREMRGMFCRAMQELGAD
                     PATAVVIITGAGRAFSAGLDLNELGVEGIRESGGVTFISVVERMEAPVIAAVNGYAIG
                     IGCIITFCCDLIVASDRAEWRLPQVALGILPNYGGATRLARIVGKGLAMRVAMGFPLK
                     AEEAYRIGLAQWLVPHAELMAQALAVADHVAGLPPLAVRMVKESLNRGLDIPNIADAS
                     LVDSYRFMVLEMSEDKAEAHEAWRERRKPRFRGR"
     gene            complement(1167..2291)
                     /locus_tag="VF991_12985"
     CDS             complement(1167..2291)
                     /locus_tag="VF991_12985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011994937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX9557406.1"
                     /translation="MAQQITYDKAYDTVAPEDFAAMLEVPRYGRRSDAFDSIISATHD
                     HFWDPLDKSYIDFDQPFDMTATPVMPLDTVVELRSAVADRLDDRQKIQLGNDVMHWSI
                     SNLLHGEQGALSLSASLCHILLDPGAQEYAANQAREEARHVAGFTRYIAKRWGDPLPV
                     GKTIAGVLADLVSTPEVYKKIVGMQMLIEGLAMGSFATLNAKTNDPVLRRLVQLVMSD
                     EAFHHRFGRLWASKTIRHLSEDEHKKVEDWSAQIFQMLLFNLINAEQKQVIYAKYGLD
                     WQWVRDAVRETFSDDDRRAQLKESTNIFRVLIKTLLHAGIITQRTAPLYAVWVDMKEL
                     EAEGEGIPGDVVAEEMLVVLREINAKRKRIAAKDVTAITS"
     gene            2433..3197
                     /gene="purC"
                     /locus_tag="VF991_12990"
     CDS             2433..3197
                     /gene="purC"
                     /locus_tag="VF991_12990"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEX9557407.1"
                     /translation="MSRRRRIYEGKAKTLFEGPEPGTIVQYFKDDATAFNNQKKGTIT
                     GKGVINNRISEFLMTKLGEIGVPTHFIRRLNMREQLIRQVEIIPLEIVVRNVAAGSFA
                     KRFGVEEGTQLPRSIMEFFYKNDALGDPMVTEEHITAFGWATPQDLDDIVALTLRVND
                     FLFGLFLGCGIKLIDFKVEFGRLYEDDMVRIVLADEISPDSCRLWDLRTNEKMDKDRF
                     RRDLGKVEEAYQEVARRLGILIDQGPGDVRGPTTLQ"
     gene            3221..3463
                     /gene="purS"
                     /locus_tag="VF991_12995"
     CDS             3221..3463
                     /gene="purS"
                     /locus_tag="VF991_12995"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006206034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEX9557408.1"
                     /translation="MKARVHVTLKNGVLDPQGKAIGHSLNRLGFAEVGDVRQGKFIEL
                     ELAETDKAKAKARLEEMCRKLLANTVIENYSIELVG"
     gene            3463..4152
                     /gene="purQ"
                     /locus_tag="VF991_13000"
     CDS             3463..4152
                     /gene="purQ"
                     /locus_tag="VF991_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEX9557409.1"
                     /translation="MKAAVLVFPGSNREVDVAQAIELLTGRKPEMVWHGDGDFVKTDL
                     IVVPGGFSYGDYLRCGAMAAQSPVMAEVKRRAGQGVPVLAICNGFQIAAEAGLLPGVL
                     MRNAHLKFVCSDVHLKVETSQSLFTNRYQAGQVIRVPVAHAEGNYFADAETLKRLEDR
                     GQVAFRYCAPDGTVDGTGNPNGSIENIAGVFNEAKTVMGLMPHPENAVEPMFGGCDGR
                     ALFEGLVEALT"
     gene            4167..6371
                     /gene="purL"
                     /locus_tag="VF991_13005"
     CDS             4167..6371
                     /gene="purL"
                     /locus_tag="VF991_13005"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEX9557410.1"
                     /translation="MPNEPAITPQIVAEHGLSPDEYQRVLAIMGRAPTMVELGIFSAM
                     WSEHCSYKSSMVWLKKLPSTAPWVIQGPGENAGVIDIGDGQAAIFKMESHNHPSYIEP
                     YQGAATGVGGILRDVFTMGARPVANLNALRFGEPQHPKTRHLVSGVVAGIGGYGNCMG
                     IPTVGGETNFHAAYNGNILVNAMTVGIAPTNRIFYAAAAGVGNPLVYVGSKTGRDGIH
                     GATMASTEFNDDSEEKRPTVQVGDPFVEKLLLEACLELMATDAIVAIQDMGAAGLTSS
                     SFEMAAKGGLGVIVELDKVPMRETGMNPYELMLSESQERMLIVLKPGREALARRIFEK
                     WELDFAVIGHLTDTERMVLSWHGDIVGDIPIPPLVTEAPVYERPWTLTPLPAVLDPAA
                     IAAPKDWRASLVTLMSCPDLASKAWIWHQYDHLIMGNTAIRPQDGDAALVRVPGGHKG
                     LAMTSDCTPRYVQAHPETGGRQAVAEAWRNITAVGATPLAVTDNMNFGNPQKPEIMGQ
                     FAGAILGMAEACKALDFPVVSGNVSLYNETEGKPILPTPTIGAVGVIEDIAHGVGSRI
                     TQGGLAIVLLGETAGWLGQSLYLREILGREEGAPPPVDLAVERRNGDFVRGEIVGRRV
                     AACHDLSDGGLLVGLAEMCLAGGTGATVKLPAGTNLPHAFLYGEDQGRYLVVTDDGGA
                     LIAAAQAAGVPAVQLGYSGGPDLIVEGLLSIALSDLRAAHESWLPDYMNSVA"
     gene            6386..6622
                     /locus_tag="VF991_13010"
     CDS             6386..6622
                     /locus_tag="VF991_13010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012386027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HEX9557411.1"
                     /translation="MPMAAEDIIRLIKEGIPGAEVEIEDLAGDGDHYAATVISTAFAG
                     KSKIQQHQMVYGALGGRMGGVLHALKLTTMAQRP"
     gene            6678..7019
                     /gene="grxD"
                     /locus_tag="VF991_13015"
     CDS             6678..7019
                     /gene="grxD"
                     /locus_tag="VF991_13015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEX9557412.1"
                     /translation="MSEPQVFDRIRDEIAKHDVLLFMKGTPVFPQCGFSAAVVEVLSE
                     LGVKFHGINILTDPDLRQGIKEFSQWPTIPQLYVKGEFVGGCDIIREMFETGELGQLM
                     KEKGVTLADAA"
     gene            complement(7077..7841)
                     /locus_tag="VF991_13020"
     CDS             complement(7077..7841)
                     /locus_tag="VF991_13020"
                     /EC_number="1.13.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class III extradiol ring-cleavage dioxygenase"
                     /protein_id="HEX9557413.1"
                     /translation="MSMPTIFVSHGAPTLILDDVPARAFLASLGRQLPRPKAIIAVSA
                     HWDTDVPAVSLARKPETIHDFYGFPEALYRLHYNAPGAPELAERVAKLTGAAHDPHRG
                     LDHGAWVPAMLGWPEADVPILQLSVQPEESPAHHIALGRKLECLREEGVLVMGSGSAT
                     HNLRALVRGGGELEPEPWAKAFDDWLAETLEKGDEAALADYRAQAPYAREAHPTDEHF
                     LPLHVAYGAAGEGAHGRALHRSFTLGNLSMASYAFE"
     gene            7921..9495
                     /locus_tag="VF991_13025"
     CDS             7921..9495
                     /locus_tag="VF991_13025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557414.1"
                     /translation="MRQILRTAWQALACLALLAVAPAGAQTLRMVAHSDLKVLDPIWT
                     TAFISRNHGYLIYDTLFSRDAELRSRPQMVDKYETSANKLTWTFTLRDGLEWHDGTPV
                     TAEDCVASLKRWAARDSLGQQLMASIGDMKAIDAKTFTIVLKEPFGLVLEALGKPSSN
                     VPFMMPKRVAETDPFKQIDDYTGSGPFIFKKDEWKPGEKIVYVKNPKYKPRPEPPSML
                     AGGKVVKLDRVEWIAITDPLTAVNALQQGEIDLIEAPVPDLFPMLKADKNIELFGWNA
                     LGSQIIMRFNHLHPPFNNVKARQAAMYAIAQEDFLRAQVGDPGIYRVCNAPLVCGSPY
                     EKSYGNLLIKPDFDKARQLLKESGYDGTPIVMMQATDLQSSNQLPPVGKQALEKAGFK
                     VDLQAMDWQTVVSRRARKDPPDKGGWNIFYTTTVTVDADSPASNSFTSGGCDKAWFGW
                     PCDPEMEKMRAAYARESDPDKRKQIALAVSDRVMDQATYIVLGQYKAFGAYRKDRISG
                     WLPGPVPVWWNVSKKN"
BASE COUNT         1725 a         3177 c         3109 g         1616 t
ORIGIN      
        1 ccagccgctg atcacggtga gcaaggacaa cggagtcgct acggtcacgc tcaaccgtcc
       61 cgagaagctc aacgcactga accgcgagat gcgcgggatg ttctgccgcg cgatgcagga
      121 gctcggcgct gatcccgcaa ccgctgtggt cataatcacc ggagccgggc gcgcgttctc
      181 ggcagggctc gatctcaatg agctgggcgt cgagggaatc cgcgagagcg gcggcgttac
      241 cttcatctcg gtggtcgagc ggatggaagc gccggttatc gccgcggtca acggctacgc
      301 catcggcatc ggctgcatca tcaccttctg ctgcgatctg atcgtggcgt cggatcgcgc
      361 ggaatggcga ttgccgcagg tggcgctcgg catcctgccg aactacggcg gtgccactcg
      421 cctcgcgcgg atcgtcggca agggcctggc gatgcgcgtg gcgatgggct tcccattgaa
      481 ggcggaggag gcctaccgca tcggcctcgc ccagtggctg gtgccgcacg ccgagctgat
      541 ggcccaggcg ctggcggtcg ccgaccacgt cgccgggctg ccgccccttg ccgtgcgcat
      601 ggtcaaggag tccctgaatc gcggcctcga catccccaac atcgccgacg cctcgctggt
      661 cgattcctac cgcttcatgg tgctggagat gagcgaggac aaggccgagg cccacgaggc
      721 ctggcgggaa cggcgcaagc cccgcttccg cgggcgatag gctcaagcag caaagttatt
      781 tttgcgccgc acggtgcgca cttattcgga gctccctaag cgctgtacga cggggggagg
      841 caagccgaag gcgaatttct gcgcagcatg gtgcgcagaa attcaagcac gagcctagga
      901 cgtgcccaaa atactacttg acaggtatgg aagttttact tacgatatca ctaattggct
      961 ttttggaccg atcgtcgctg atcaagcgtg cgccgttgtt tgcggctgtc ccacccccgg
     1021 gaaatggata gcgcttgcgg gaattgcgga aattcccgtc ggcgggccca acgacagagg
     1081 ctgccaaatt gacggatgac cgtgctgaaa ccctgctaat tgccgtagcg cttgcggaaa
     1141 ctgcggaaac tcgatcgcag cccttctcag gaggtgattg ccgtcacatc cttggcggcg
     1201 atgcgctttc gcttggcgtt gatctcgcgc agcaccacca gcatctcctc ggccacgacg
     1261 tcgcccggga tgccctcgcc ttcggcctcg agctccttca tgtcgaccca caccgcgtag
     1321 agcggcgccg tgcgctgcgt gatgatgccg gcatgcagca gggtcttgat cagcacgcgg
     1381 aagatgttgg tgctctcctt gagctgggcg cgccggtcgt cgtcgctgaa ggtttccctg
     1441 accgcatcgc gtacccactg ccagtcgagc ccgtacttgg cgtagatgac ctgcttctgc
     1501 tcggcgttga tcaggttgaa cagcagcatc tggaagatct gggccgacca gtcctcgacc
     1561 ttcttgtgct cgtcctcgct gaggtggcga atggtcttgg acgcccagag gcggccgaag
     1621 cgatggtgga aggcctcgtc gctcatcacc agctggacca gccggcgcag cacgggatcg
     1681 ttggtcttgg cgttcaaggt ggcgaacgag cccattgcca ggccttcgat cagcatctgc
     1741 atgccgacga tcttcttgta gacctcgggc gtgctgacga ggtcggccag caccccggcg
     1801 atggtcttgc cgaccggcag cgggtcgccc cagcgcttgg cgatgtagcg ggtgaagccc
     1861 gcgacgtggc gggcctcctc gcgcgcctgg ttggcggcat attcctgggc gcccggatcg
     1921 agcaggatgt ggcagaggct ggccgacagc gacagcgcgc cctgctcgcc gtgcagcagg
     1981 ttggagatcg accagtgcat gacatcgttg ccgagctgga tcttctgccg gtcgtccagc
     2041 cggtcggcga cggcgctcct gagctcgacc accgtatcga gcggcattac cggcgtggcg
     2101 gtcatgtcga agggctggtc gaaatcgatg tagctcttgt ccagcgggtc ccagaaatgg
     2161 tcgtgggtgg ccgaaatgat gctatcaaac gcatcgctcc gccggccgta gcgcggaacc
     2221 tccagcatcg ccgcgaaatc ctcgggcgcc acggtatcgt aggccttgtc gtaggtgatc
     2281 tgctgggcca tgtcgggcct ccactgtgag aggtgaatat gacggccacg tcaccttttt
     2341 caatggattt ttccccagtc ccggcgcatg ggacttccgc catattccgg cccaatgttg
     2401 ggcggctcac gccggccgcc caggagtaaa agatgtcccg ccgccgccgc atctacgagg
     2461 gcaaggccaa gaccttgttc gaggggcccg agcccgggac gatcgtccag tacttcaagg
     2521 acgacgctac cgcgttcaac aaccaaaaga agggcaccat caccggcaag ggtgtgatca
     2581 ataaccgcat ctccgagttc ctgatgacca agctcggcga gatcggcgtg ccgacccatt
     2641 tcatccgccg gctcaacatg cgtgagcagc tgatccgcca ggtcgagatc atcccgctcg
     2701 agatcgtggt gcgcaacgtg gcggccggct cgttcgccaa gcgcttcggc gtcgaggaag
     2761 gcacccagtt gccgcgctcg atcatggagt tcttctacaa gaacgacgcg ctgggcgatc
     2821 ctatggtgac cgaggagcac atcaccgcct tcggctgggc caccccgcag gacctcgacg
     2881 acatcgtggc gctgacgctg cgggtcaacg acttcctgtt cggcctgttc ctcggctgcg
     2941 gcatcaagct gatcgacttc aaagtcgagt tcggccgcct atatgaagac gacatggtcc
     3001 gcatcgtgct tgccgacgag atcagccccg attcctgccg gctgtgggat ctccgcacca
     3061 acgagaagat ggacaaggac cgtttccgcc gcgacctcgg caaggtcgag gaggcctacc
     3121 aggaggtggc gcggcggttg ggcatcctga tcgaccaggg accgggcgat gtccggggcc
     3181 ccaccacgtt gcaatagcga cgttgcagta aagaggcgca atgaaagcca gagttcacgt
     3241 cacgctgaag aacggcgtgc tcgaccccca gggcaaggcc atcggacact ccctcaatcg
     3301 tctgggcttt gccgaagtgg gcgacgtccg ccagggcaag ttcatcgagc tcgagctggc
     3361 cgagaccgac aaggccaagg ccaaggcgcg gctcgaagag atgtgccgca agcttttagc
     3421 caacacggtg atcgagaact attcgatcga gctggttggc tgatgaaagc ggcggtcctg
     3481 gtctttcccg gctccaatcg cgaggtcgat gtcgcgcagg cgatcgagct gctcaccggg
     3541 cgcaaaccgg aaatggtctg gcacggcgac ggcgatttcg tgaagaccga tttgatcgtg
     3601 gtgccgggcg gcttctccta cggcgactat ctgcgctgcg gcgccatggc ggcacagtcg
     3661 ccggtgatgg ccgaggtcaa gcgccgcgcc ggccagggcg tgccggtgct ggcgatttgc
     3721 aacggcttcc agatcgccgc cgaagcgggc ctgctgccgg gcgtgctgat gcgcaacgcc
     3781 cacctgaagt tcgtttgctc ggatgtccat ctcaaggtcg aaaccagcca gagcctgttc
     3841 accaaccgct accaggcggg ccaagtgatc cgcgtgccgg tggcccatgc cgagggcaat
     3901 tacttcgccg acgccgagac gctgaagcgg ctggaagatc gcggccaggt cgcgttccgc
     3961 tactgcgcgc ccgacggcac cgtcgacggc accggcaatc ccaacggctc gattgaaaac
     4021 atcgccggcg tcttcaacga ggccaagacg gtgatggggc tgatgcccca tccggagaac
     4081 gccgtcgagc cgatgttcgg cgggtgcgac ggccgggcgc tgttcgaggg actggtcgag
     4141 gcgctcacgt gactcagccg gtcaagctgc ccaacgaacc cgcgataacg ccgcagatcg
     4201 tggccgagca cgggctgtcg cccgacgagt atcagcgcgt gctcgccatc atgggccggg
     4261 cgcccaccat ggtcgagctc ggcatcttct cggcgatgtg gagcgagcac tgctcctaca
     4321 agtcctcgat ggtctggctg aagaagctgc cgtccacggc gccatgggtg atccagggcc
     4381 cgggcgagaa tgccggcgtg atcgatatcg gcgacggcca ggccgccatc ttcaagatgg
     4441 agagccacaa ccacccgtcc tacatcgagc cctaccaggg cgcggccacc ggcgtgggcg
     4501 gcattctgcg cgacgtcttc accatgggcg cgcggccggt cgccaacctc aatgcgctgc
     4561 gcttcggtga gcctcagcat cccaagacgc ggcatctggt gtcgggcgtg gtcgccggca
     4621 tcggcggcta cggcaattgc atgggcatcc cgacggtcgg cggcgagacc aacttccatg
     4681 ccgcctacaa cggcaacatc ctggtcaacg ccatgaccgt gggcatcgcg cccaccaacc
     4741 gaatcttcta tgcggcggcc gcaggcgtcg gcaacccgct ggtctatgtc ggctcgaaaa
     4801 ccggccgtga cggcatccat ggcgccacca tggcctcgac cgagttcaac gacgacagcg
     4861 aagagaaacg cccgaccgtg caggtcggcg atccgttcgt cgaaaagctg ctgctcgagg
     4921 cctgcctaga actgatggcg accgacgcga tcgtcgccat ccaggacatg ggcgccgccg
     4981 gcctcacctc gtcgtcgttc gagatggcgg ccaagggcgg gctgggcgtc atcgtcgagc
     5041 tcgacaaggt gccgatgcgc gagaccggca tgaaccccta cgagctcatg ctctccgaaa
     5101 gccaggagcg catgctgatc gtgctgaaac ccggccgcga ggcgctggcg cgcaggatct
     5161 tcgaaaagtg ggagctcgat ttcgccgtca tcggccatct gaccgacacc gagcgcatgg
     5221 tgctgtcctg gcacggcgac atcgtgggcg acatcccgat cccgccgctg gtcaccgaag
     5281 cgccggtcta tgaacggccc tggacgctga ccccgctgcc ggccgtgctc gacccggcgg
     5341 ccatcgcggc acccaaggac tggcgcgcct cgctggtcac cctgatgagc tgccctgacc
     5401 tcgccagcaa ggcgtggatc tggcaccagt acgaccacct gatcatgggc aacaccgcca
     5461 tccgcccgca ggacggcgat gccgccctgg tgcgcgtacc gggcggccac aaggggctcg
     5521 ccatgacgtc ggactgcacg ccgcgctacg tgcaggccca tcccgagacc ggcgggcggc
     5581 aggctgtcgc cgaggcctgg cgcaacatca ccgcggtcgg cgccacgccg cttgccgtca
     5641 ccgacaacat gaatttcggc aacccgcaga agcccgagat catgggccag tttgccggcg
     5701 ccattttggg catggccgag gcctgcaagg cgctcgactt ccccgtcgtc tcgggcaacg
     5761 tgtcgcttta caacgagacc gagggcaaac cgatcctgcc gacgccgacc atcggcgcgg
     5821 tcggcgtcat cgaggatatc gcccacggcg tcggttcgcg catcacccag ggcgggcttg
     5881 ccatcgtgtt gctcggcgag accgcgggct ggctcggcca atcgctctac ctgcgcgaga
     5941 tcctgggccg cgaggaaggc gcgccgccgc cggtcgacct tgcggtcgaa cgccgcaatg
     6001 gcgacttcgt gcgcggcgag atcgtcggac ggcgcgttgc cgcctgtcac gacctgtccg
     6061 acggcggcct gctggtcggc ttggccgaga tgtgcctggc cggcggcacg ggcgccacgg
     6121 tcaagctgcc ggccggcacc aacctgccgc acgccttcct ttatggcgag gaccagggcc
     6181 gttacctggt ggtgaccgat gacggcgggg cactgatcgc cgccgcccaa gcggccggcg
     6241 tgccggcggt gcaactcggc tattcgggcg gacccgacct gatcgtcgag ggtctgctgt
     6301 cgattgcttt gagcgacctc agggcggctc acgaatcctg gctgcccgac tatatgaaca
     6361 gcgttgccta ggaacggaga acgccatgcc gatggctgcc gaagacatca tccgcctgat
     6421 caaggaaggc atccccgggg ccgaggtcga gatcgaggat ctggcgggcg acggcgacca
     6481 ctatgccgcc acggtcattt ccacagcctt cgccggcaaa tccaagatcc agcagcacca
     6541 gatggtctat ggcgcgttgg gcggccgcat gggcggcgtg ctgcatgccc ttaaattgac
     6601 caccatggcg caacggccct gaggacccta tattgacgcc agacccgcgc cccctgcagc
     6661 gcttcgagga gatcgagatg agcgaacccc aggtctttga ccgcatccgc gacgagatcg
     6721 ccaagcacga cgtgcttctg ttcatgaagg gcacgccggt attcccgcaa tgcggcttct
     6781 cggccgctgt cgtcgaagtg ctgagcgagc tcggcgtgaa attccacggc atcaacatcc
     6841 tgaccgaccc cgacctgcgc cagggcatca aggaattcag ccagtggccg accatccctc
     6901 agctctatgt gaagggcgag ttcgtcggcg gctgcgacat catccgcgag atgttcgaga
     6961 ccggcgagct cggacagctg atgaaggaaa agggcgtcac gctggccgac gccgcctgaa
     7021 caggctcgct gtcatcccca gcgcagccct tgtgggtcat tggcgcgagg cgtgtcctac
     7081 tcgaacgcgt aggacgccat cgacaggttt ccgagcgtaa agctgcgatg gagcgcgcgt
     7141 ccgtgcgcac cctcgccggc cgctccatag gccacgtgca gcggcaggaa atgctcgtcc
     7201 gtcggatggg cctcgcgggc atagggcgcc tgggcgcgat agtcggccaa cgccgcctcg
     7261 tcgccctttt ccagcgtttc cgctagccag tcgtcgaagg ccttggccca cggttcgggc
     7321 tccagttcgc cgccgccgcg caccagcgcg cgcagattat gggtggcgct gcccgagccc
     7381 atcaccagca cgccctcctc gcgcaggcat tctagcttgc ggccgagggc gatgtgatgg
     7441 gcgggactct cctcgggctg caccgagagc tgcaagatcg gcacgtcggc ctcgggccag
     7501 cccagcatcg ccggcaccca ggcgccatga tccaacccgc gatgcggatc gtgggcggcg
     7561 ccggtgagct tggccacccg ctcggccagt tccggcgcac ccggcgcgtt gtagtgcaac
     7621 cggtagagcg cttcggggaa gccgtagaaa tcgtggatgg tctcgggctt gcgcgccagc
     7681 gacacggccg gaacgtcggt gtcccagtgc gccgacaccg cgatgatggc cttgggcctg
     7741 ggaagctgcc ggccgagcga cgccaggaag gcgcgcgccg gcacatcatc caggatcagg
     7801 gtcggggcgc cgtgcgagac gaagatcgtt ggcatggaca tcgctttatt cctcatgccg
     7861 ctcgtggcag cctctgtgca atcgagatcc gactctcatc taatacaggg gaaggccgac
     7921 atgaggcaga ttttgcgcac agcatggcag gccctggcct gcctcgccct gctggcggtc
     7981 gcgccggccg gcgcccagac gctcaggatg gtcgcccatt ccgacctcaa ggttcttgat
     8041 cccatctgga ccaccgcctt catcagccgc aaccatggtt atctgatcta cgacacgctg
     8101 ttttcccgcg acgccgagct gcgcagccga ccgcagatgg tcgacaagta cgagacctcg
     8161 gccaacaagc tcacctggac cttcaccctg cgcgatggcc tggaatggca cgacggcaca
     8221 ccggtcacgg cggaggattg cgtcgcctcg ctcaaacgct gggccgctcg cgattcgctc
     8281 ggccagcaat tgatggcatc catcggcgac atgaaggcga tcgacgccaa gaccttcacc
     8341 atcgtgctca aggagccgtt cgggctggtg ctcgaggcgc tcggcaagcc ctcctccaat
     8401 gtgcctttca tgatgcccaa gcgggtcgcc gaaaccgacc cgttcaagca gatcgacgac
     8461 tacaccggct ccggcccctt catcttcaag aaggacgagt ggaagcccgg cgagaagatc
     8521 gtctacgtca agaaccccaa gtacaagccg cggcccgagc cgccctccat gctggccggc
     8581 ggcaaggtgg tgaagctcga ccgcgtcgag tggatcgcca tcaccgatcc gctgactgcg
     8641 gtcaatgccc tgcagcaggg cgagatcgac ctgatcgagg cgccggtgcc cgacctgttc
     8701 ccgatgctga aggccgacaa gaacatcgag ctgttcggct ggaacgcgct gggcagccag
     8761 atcatcatgc gcttcaacca cctccatcca ccgttcaaca acgtgaaggc gcgacaggcg
     8821 gcgatgtacg ccatcgccca ggaggatttc ttgcgcgccc aggtgggcga ccccgggatc
     8881 taccgggtgt gcaacgcgcc cctggtctgc ggctcgccct atgagaagag ctacggcaat
     8941 ctcctgatca agcccgactt cgacaaggcg cgccagctcc tgaaggaaag cggctacgac
     9001 ggcacgccga tcgtcatgat gcaggcgacc gacctgcaat cctccaacca gctcccgccg
     9061 gtcggcaagc aggcgctgga aaaggccggc ttcaaggtcg acctgcaggc gatggactgg
     9121 cagaccgtgg tgtcgcgtcg cgccaggaag gacccgcccg acaagggcgg ctggaacatc
     9181 ttttacacca ccaccgtcac cgtcgatgcc gacagcccgg ccagcaactc tttcaccagt
     9241 ggcggctgcg acaaggcatg gttcggctgg ccgtgcgatc cggagatgga gaagatgcgc
     9301 gccgcctacg cccgcgagag cgatccggac aagcgcaagc agatcgcgct tgccgtctcc
     9361 gaccgggtga tggaccaggc cacctacatc gtgctcggcc agtacaaggc cttcggcgcc
     9421 taccgcaagg accgcatctc gggctggctc cccggtccgg tgccggtgtg gtggaacgtc
     9481 agcaagaaga attgacgctc ccgcgctagg gcgagagcgt cccgtcggtc gtgcgctcac
     9541 gccgccttgg cgagaggctc ctcgcgccag cgcagagccg cctcggccac gcgctcgccg
     9601 agcgcctcca tggtgcggaa gtccgac
//
LOCUS       DASWGA010000549         6291 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1451029, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000549 DASWGA010000000
VERSION     DASWGA010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6291
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1451029"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VF991_13030"
     CDS             complement(<1..342)
                     /locus_tag="VF991_13030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557415.1"
                     /translation="MKTIACVYDTYGQARQVVADLEDSGIATADINLIANKYVCDETA
                     RIDEPSAAGPGAGVGAALGGTAGLLAGLGVIAIPGLGPVVAAGALAATAVGAAAGAAT
                     GGVVGALVSAGV"
     gene            complement(366..824)
                     /locus_tag="VF991_13035"
     CDS             complement(366..824)
                     /locus_tag="VF991_13035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557416.1"
                     /translation="MNRKTALAVLAVCCIAMSGGAFAASEADCAAQWKSADGNGDGVL
                     VGPEADRYLAYYRVRAQVTPADGRITQAAFMQACRNDVFMAKAPESGAPLKGANSFTE
                     SQAKDRALAAGFTSVSSLVKDGGGIWRGTAMKDGKSVKVAVDYKGNVVSN"
     gene            962..1123
                     /locus_tag="VF991_13040"
     CDS             962..1123
                     /locus_tag="VF991_13040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557417.1"
                     /translation="MNNPKDRKPQQSQQDRDQQQRERQQREQQQRQKQQPNQQPGQKP
                     GQQQQRDDE"
     gene            1479..1880
                     /locus_tag="VF991_13045"
     CDS             1479..1880
                     /locus_tag="VF991_13045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX9557418.1"
                     /translation="MTNVDAIAVAWAPRVLSILRIMAGLMLLAHGTAKILKFPVVPNF
                     ANLDLSSLPGIAGFLELIGGALLVIGLFTRPVAFILSGMTAVAYFYAHAPRGLYPGLN
                     GGELAALYCFVFLYIAAAGPGPWSIDAARSK"
     gene            1977..2315
                     /locus_tag="VF991_13050"
     CDS             1977..2315
                     /locus_tag="VF991_13050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lin0512 family protein"
                     /protein_id="HEX9557419.1"
                     /translation="MALKRVALEIGMGTDIRGGDYTKAAVRALRDALWHNSLTVAGAV
                     GKSSDDMQVEVLIGLPKPDQVDRKQVLAVLPHGSGTVSVVEGGLEIANEAGTDKTVIA
                     QAAAIVRLDL"
     gene            2326..2670
                     /locus_tag="VF991_13055"
     CDS             2326..2670
                     /locus_tag="VF991_13055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lin0512 family protein"
                     /protein_id="HEX9557420.1"
                     /translation="MPNKRVILELGTGNDLHGGDYTKAALRAVQDALHHSSLTMIRTL
                     KVNAKTGMFVDVTIGVQQPDKVDLEKVRASLPHGIVTVKAVKGGLDVPDPEGNDIAVI
                     ASAAVAVRLELP"
     gene            2670..3452
                     /locus_tag="VF991_13060"
     CDS             2670..3452
                     /locus_tag="VF991_13060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9557421.1"
                     /translation="MLLYEHPLSSYAQKVKIALREKGLDFKVETPPALGSGRADGQFA
                     ATSPRNEVPALIDGEAHIFDSTIILEYLEDKFPSPPLLPREPAQRANARMIEEICDTL
                     YEAINWGLSEIRWFKRAEGAEAEKMKETAARQTAELQAWLTDRLGANQWFNGASFGWA
                     DLSVAPYLNRSFHYGYGTPAESPLAKWRERIRARPSVAATFREYEAAAERMGDAAARV
                     ASGAIRREYRDHRLEWMMKSGGVQVVLDGLAKNNIRFTWPLG"
     gene            3472..4635
                     /locus_tag="VF991_13065"
     CDS             3472..4635
                     /locus_tag="VF991_13065"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEX9557422.1"
                     /translation="MRRSDDRILVTHVGSLPRNAVLTDLLIRDEAGETVDRAELRRQS
                     ESAVRYVVERQMASGVDIVNDGEQPRVGFQTYVAQRMQGFGGESKRPRPRDYTDFPAL
                     LAQLPHRYPRRSKVSNAPQAIAEVRYEDLAPAEDECRMFRSALDKLPSSPLGTFMTAA
                     SPGIIATTLLNAHYDSHEAYVFALARQMRKEYELIARQFVLQIDAPDLALERTVLFQD
                     KSVAEFLKVAEVHVAALNEALAGIPRERIRLHCCWGNYDGPHIHDVPLADILPVLTQA
                     KVGALSIEFANPRHQHEYAALKRAKLPPEFLLLPGVIDSKTNFVEHPEVVANRICEAV
                     DAVGDRSRIIASVDCGFGTFAGSELVAEDVVWAKLKSCREGADIATRRLWSRS"
     gene            complement(4687..4986)
                     /locus_tag="VF991_13070"
     CDS             complement(4687..4986)
                     /locus_tag="VF991_13070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557423.1"
                     /translation="MRSLSSLTIILLTTVTVGAAASYAQTTPPSNCGVETWSTDKMAY
                     VTVPCAGGQEQNSQTAKAPGSSTEKCGIETWSTDKMAYVGTPCPAGITYENPASK"
     gene            complement(5143..5367)
                     /locus_tag="VF991_13075"
     CDS             complement(5143..5367)
                     /locus_tag="VF991_13075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557424.1"
                     /translation="MRPAVVIGVLLIALGIAGLLIDSIKFADKRTVIDAGPIKVTEER
                     QHTVAIPTIAGVLAIVAGAALVFFGRQARS"
     gene            complement(5452..5976)
                     /locus_tag="VF991_13080"
     CDS             complement(5452..5976)
                     /locus_tag="VF991_13080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_273701404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(5695..5697),aa:Sec)
                     /transl_table=11
                     /product="UGSC family (seleno)protein"
                     /protein_id="HEX9557425.1"
                     /translation="MTFRVLDPTPEKAPPGGQLAPRLASLEGKTIGFISNGKVGTKGF
                     FAHLDRLLREEHGVARVVSRTKSNYSAPADGHIVAEIKNWDAVIAGIGDUGSCSSCSL
                     HDSVTAERLLVPAFSVMTSRFVSAAEMMSRVLGMPDYRFAVIGHPVSSATDGDLEAMA
                     RVAIDQGRRLLLRA"
     gene            complement(5990..>6291)
                     /locus_tag="VF991_13085"
     CDS             complement(5990..>6291)
                     /locus_tag="VF991_13085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557426.1"
                     /translation="QLREHLQAAQWSKTDIANFIHERARIHRREWADVGKGAVVRDRG
                     DRVYPALPSPDQLLVVAAGGPAGGFGAVIPPWLGNKSRAVTLPIGACVDCEPLNK"
BASE COUNT         1090 a         2077 c         2068 g         1056 t
ORIGIN      
        1 cacgccggcg ctcaccagcg cgccgaccac gccgccggtc gccgcaccgg ccgcggcgcc
       61 gaccgcggtc gccgccaagg cgcccgccgc caccaccggt cccaggccgg gaatggcgat
      121 gacgccaagt ccggcgagca ggcccgccgt gccgcccagg gcggcgccga cgccggcgcc
      181 tggacccgca gccgatggct cgtcgatgcg ggcggtctcg tcgcagacgt acttgttggc
      241 gatcaggttg atgtcggcgg tggcgatgcc agaatcctcg aggtcggcca cgacctggcg
      301 ggcctggcca taggtgtcgt agacgcatgc gatggtcttc atgacggctt ctcctggtcg
      361 agggtttagt tgctgacgac gttgcccttg tagtcgacgg ccaccttcac gctcttgccg
      421 tccttcatgg cggtgccgcg ccagatgccg ccgccgtcct tgaccagcga ggacacgctg
      481 gtgaagccgg cggcgagtgc acgatccttg gcctgcgatt cggtgaagct gttggcgccc
      541 ttcaacggcg cgcccgactc gggcgccttg gccatgaaca cgtcgttccg gcaggcctgc
      601 atgaaggcgg cctgcgtgat gcgtccgtcg gccggcgtta cctgcgcgcg aacgcggtaa
      661 taggcgagat aacggtccgc ctcgggacca accagcacgc cgtcgccgtt gccatcggcg
      721 cttttccact gggcggcgca gtcggcttcg gaggccgcga aggcgccgcc tgacatagcg
      781 atgcaacata cggcgagcac ggcaagtgca gttttccggt tcatggctat cgtctccata
      841 tcttgtggtc gggctacgct gggagaacga acggactggc aacccgttgc gacgaggggg
      901 cgtttgttcg ccagcggcgt tcattccggg cgtcgctgcc accacggatg gagggctagc
      961 gatgaacaat ccgaaggacc gcaagccaca gcagtcccaa caggatcgtg accagcagca
     1021 gcgcgagcgc caacagcgcg agcagcagca gcgtcagaag caacagccca accagcagcc
     1081 gggccagaag cccggtcagc agcagcagcg ggacgacgaa tagccattcg tcctaaggag
     1141 ggagggatgc ccgtcgatcg gcgggcatcc ctttctttgg aaagcgagag ttgatgttgc
     1201 gatcagcacc accgcgcgag ccgccgccgg ttccaccgga acccaagacc gatccgattc
     1261 cgcccgagat gccgcagccc ggcggaccag tgccggaaga catgccgcca ccgccgccgc
     1321 atccgaccgg gccgcccgct cctgtcgctt gagcgcagac cgcactacag ggcgcccgcc
     1381 tcactgacga ttacgttacc agattaccgt agcaaccgct tgtcggaagt tcgcgccgcg
     1441 gacatgattg gcgtgcgttc aattgtgggg agtgcatcat gacgaatgtc gacgcaatcg
     1501 ccgtggcatg ggcgccgcgc gtgctcagca tcctgcgtat catggctggg ctgatgttgt
     1561 tggcgcatgg aacggcaaaa attctgaagt tcccggtcgt gccgaatttc gccaatctgg
     1621 atctgtcgtc gttgcccggc atcgccggat tcctagagct gatcggcggc gcgctgctcg
     1681 tcatcggcct gttcacccgg ccggtggcct tcatcctctc gggcatgacc gcggtcgcct
     1741 acttctacgc ccatgcgccg cgcggccttt acccgggcct taacggcggc gagcttgcag
     1801 cgctctattg cttcgtcttc ctctatatcg cggcggccgg cccgggcccg tggagcatcg
     1861 acgccgcgcg cagcaagtag cgcttaacgc cgcctcattt ggactgtaag gaggaaggac
     1921 ggccgccctg tgcggccgtc ttgctgcgtc caacgcaagg ccgggaggaa gctgtcatgg
     1981 cgctgaagag ggtggctctc gagatcggca tgggcaccga catccgtggc ggcgactaca
     2041 ccaaggccgc ggtccgcgcg ctgcgcgacg cgctgtggca caactcgctc accgtcgcgg
     2101 gggcggtcgg caagtcgagc gacgacatgc aggtcgaggt gctgatcggc ctgcccaagc
     2161 ccgaccaggt cgacaggaag caggtactgg cggtgctgcc gcacggcagc ggcacggtga
     2221 gcgtggtcga aggcggtttg gagatcgcca acgaagccgg caccgacaag acggtgatcg
     2281 cccaggcggc cgccatcgtg cggctcgatc tctgaggagg ccattatgcc caacaaacgt
     2341 gtcatcctcg agctcggcac cggcaacgat ctgcacggcg gcgactacac caaggcggcg
     2401 ttgcgtgccg tgcaggacgc gctgcaccac agttccctca ccatgatccg cacgctgaag
     2461 gtcaacgcca agaccggcat gttcgtcgac gtcacgatcg gcgttcagca gcccgacaag
     2521 gtcgatctcg agaaggtgcg ggcctcgctg ccgcacggca tcgtcacggt gaaagcggtc
     2581 aagggcgggc tcgacgtgcc cgaccccgag ggtaacgaca tcgccgtgat cgccagcgcc
     2641 gcagtggccg tccgattgga gcttccctga tgctgctcta cgaacatccg ctgtcgtcct
     2701 acgcccagaa ggtcaagatc gcgttgcgcg agaagggcct cgacttcaag gtcgagacgc
     2761 cgccggcgct gggctcgggc agggccgacg gccagtttgc cgcgaccagc ccgcgcaacg
     2821 aagtgccggc gctgatcgac ggcgaggccc acattttcga ctcgacgatc atccttgaat
     2881 atctcgagga caaattcccg tctccgccgc tgctgccgcg cgaacccgcc cagcgcgcca
     2941 atgcccgcat gatcgaggag atctgcgata cgctctacga agcgatcaat tggggcttga
     3001 gcgagatccg ctggttcaag cgggccgagg gggctgaggc cgagaagatg aaggaaaccg
     3061 ccgcgcgcca gacggccgag ctgcaggcct ggctgaccga caggctgggc gccaaccagt
     3121 ggttcaacgg cgcaagcttc ggctgggccg atctcagcgt ggcgccctac ctcaaccgct
     3181 cgttccacta cggctacgga acgcccgcgg agtcgccgct ggccaaatgg cgcgagcgca
     3241 tccgggcgcg gccgtcggtc gcggcgacct tccgcgagta cgaggcggcg gcggagcgca
     3301 tgggcgatgc cgcggcccgt gtcgcgtcgg gagcgatccg gcgcgaatac cgcgaccatc
     3361 ggctggaatg gatgatgaaa tcgggcggcg tgcaggtcgt gctcgacggc ctggccaaga
     3421 acaacatccg cttcacctgg ccgcttggct agaagactgg ggaatttgac catgcgccgc
     3481 agcgacgatc gcatcctcgt cacacatgtc ggcagcctgc cgcgcaacgc agtgctgacc
     3541 gacctcctga tccgcgacga ggcgggcgaa acggtcgacc gcgccgagct caggcggcag
     3601 agtgagagcg cggtgcgcta cgtggtcgag cggcagatgg caagtggcgt cgacatcgtg
     3661 aacgacggcg agcagccgcg tgtcggcttc cagacctacg tggcgcaacg catgcagggc
     3721 ttcggcggcg aatccaagcg gccccggcca cgcgactata cggacttccc cgcgctcctg
     3781 gcgcagcttc cccatcgcta tcccaggcgc agcaaggtgt cgaatgctcc tcaggcgatc
     3841 gccgaggtcc gttacgagga tctcgcgccg gccgaagacg agtgccgcat gttccgctcg
     3901 gcgctggaca agctgccatc gtcaccgctc gggacattca tgacggcggc ctctcccggc
     3961 atcatcgcca cgacgctgct gaacgcccat tacgacagcc acgaagccta cgtcttcgcg
     4021 ctggcgcgcc agatgcgcaa ggaatacgag ttgatcgcac gccagttcgt actgcaaatc
     4081 gatgcgcccg accttgcact ggaacgcacc gtgctcttcc aggacaagag cgttgccgag
     4141 ttcctcaagg tggcggaagt gcacgttgcc gcgctgaacg aggcgttggc cggcatccca
     4201 cgtgagcgca ttcgcctgca ctgctgctgg ggcaactacg acgggccgca catccacgat
     4261 gtgccgctgg ccgacatcct gccggtgcta acccaggcga aggtcggagc gcttagcatc
     4321 gagttcgcca acccgcgcca tcagcacgaa tatgccgcgc tgaagagggc aaagctgccg
     4381 cccgagttcc tgttgctgcc gggcgtcatc gattcgaaga caaacttcgt ggagcatccc
     4441 gaggtcgtcg ccaaccggat ttgtgaagcg gtcgatgcgg tgggtgaccg cagccgcatc
     4501 atcgcctccg tcgactgcgg cttcggcacc ttcgccggtt cggaactggt cgccgaagac
     4561 gtcgtctggg caaagctcaa gagctgtcgc gagggcgccg acatcgccac gcggcgcctg
     4621 tggagcaggt cctgatccag accgccgatg ggaggtccgg cggccgggcc tccctcgtgc
     4681 ggacgcttac ttcgaagcgg gattctcgta ggtgatcccg gcgggacacg gcgtgccgac
     4741 ataggccatc ttgtcggtcg accatgtttc gatgccgcac ttctccgtcg aggacccagg
     4801 agccttcgcc gtttggctgt tctgctcctg gccaccggcg cacggtacgg tgacgtaggc
     4861 cattttatcg gtcgaccatg tttcgacgcc gcaattggac ggcggtgtcg tctgggcgta
     4921 gctggcagcg gcgcccacgg tcacggtcgt cagcaggatg atcgtcaggc ttgaaagtga
     4981 acgcatggca gttcctcctt ctcccccgta ctgccatgga acgcctgctc gctgacaaaa
     5041 gccttaccgc tcgcttacaa aagccttacc gcgtcgcgtt ttcgtgtaaa aatgctgcgc
     5101 ttggattccg cccccattgc ttaacgcgac gagtgacgcg ctttagctcc gcgcctggcg
     5161 gccgaagaac accagcgccg ccccggcaac gatggcgagg acgccggcga tggtcggaat
     5221 ggcaacggtg tgctggcgct cctccgtcac cttgatcgga ccggcatcga tcaccgttct
     5281 tttgtcggcg aacttgatgc tgtcgatcag caggccggcg atgccgagcg cgatcagcag
     5341 gacgccgatg acgacggccg gtctcactgc cgcgattccc tgtccttttg cagctttcat
     5401 agcaaccaaa acgcgcgctg ctgcgaaagg ttcctaccaa atgtagtgtc gtcaggcccg
     5461 cagcaggagc cggcggccct ggtcgatggc gacccgggcc atcgcctcga ggtcgccgtc
     5521 ggtggcgctg ctgacgggat ggccgatcac cgcgaagcgg tagtccggca tgccgagcac
     5581 gcgactcatc atctcggcgg cgctgacgaa ccgcgaggtc atgacgctga aggcgggaac
     5641 cagcagacgt tcagcggtta ccgagtcgtg cagactgcac gatgaacagc ttcctcaatc
     5701 gccgatgccg gcgatcaccg cgtcccagtt cttgatctcg gcgacgatat ggccgtcggc
     5761 cggtgcgctg tagttcgact tggtgcggct caccacccgg gccacgccgt gctcctcgcg
     5821 cagcaggcga tcgagatggg cgaagaagcc cttggtgcct accttgccgt tggagatgaa
     5881 gccgatggtc ttgccttcca gcgaggcgag acggggcgca agctgcccgc ccggcggtgc
     5941 cttctcgggc gtggggtcga ggacacggaa cgtcatctgc cacctcttgt catttgttca
     6001 ggggttcgca atcaacacag gcgccgatcg gcaaggtcac ggcacggctc ttgttgccga
     6061 gccagggcgg aatcaccgcg ccgaagccgc ccgcgggccc gccggcggcg acgaccagga
     6121 gctgatcggg cgatggcagc gccggataga ccctgtcgcc gcggtcgcgc acgaccgcgc
     6181 ctttgccgac gtctgcccat tcgcggcgat ggatgcgcgc gcgctcgtgg atgaagttgg
     6241 cgatgtccgt cttgctccac tgtgcagcct gcaggtgctc gcgcagctgc t
//
LOCUS       DASWGA010000550         2599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2468311, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000550 DASWGA010000000
VERSION     DASWGA010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2468311"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..1419)
                     /locus_tag="VF991_13090"
     CDS             complement(184..1419)
                     /locus_tag="VF991_13090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HEX9557427.1"
                     /translation="MASSHGTPPVFNNKLIAWIDHRLPIFSYMEKEYRTFPTPRNFNY
                     FWNFGAIATVMLVLMIVTGIVLATNYTPHVTMAFDSVERIMRDVPSGWVIRNLHAVGA
                     SFFFIAVYIHIFRGMYYGSYKAPRELLWILGVVILLLMMATAFMGYVLPWGQMSFWGA
                     TVITNLFSAIPVVGQSIVDWLWGGFAVANPTLNRFYSLHYLLPFLIVGVVGLHVVALH
                     VHGSNNPLGIDPKGPQDTVPFHPYYTMKDGFGLTIFLIVYAGFVFFAPDELGDPANFI
                     PANPLVTPTHIVPEWYFLPFYAILRAIPDKLAGVIAMFGSIAVLFLLPWLDTSRVRSS
                     TFRPIYKWFMPVLVVDVIVLGICGANPPEGYYVPLAQVGTLYYFFHFLILLPILGKIE
                     RPLPMPPSIADAVLKKKAV"
     gene            complement(1450..2016)
                     /gene="petA"
                     /locus_tag="VF991_13095"
     CDS             complement(1450..2016)
                     /gene="petA"
                     /locus_tag="VF991_13095"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEX9557428.1"
                     /translation="MASSSIPAGGHDDPTRRDFLMVATGALGAVGIGATAWPFINNLN
                     PAADTLALASVEVNIQPVQVGQAITVNWRGKPLFIRHRTPEEIKTAEAVPLSELRDPQ
                     TDNARVTDTAKKVRPEWLIMIGVCTHLGCVPLGNKPGDPKGPFGGWFCPCHGSAYDTS
                     GRIRQGPAPKNLEIPPYLFASDTLVRVG"
     gene            2187..>2599
                     /locus_tag="VF991_13100"
     CDS             2187..>2599
                     /locus_tag="VF991_13100"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEX9557429.1"
                     /translation="MRLALFEPDIPQNLGSFIRLAACLGTALDIIEPCGFPVDDKRIR
                     RAAMDYYDLASIARHASWHAFQRDRPAGRLVLLTTSGAETFPGVAFRSDDTLLFGRES
                     AGVPGEVHEAADLRLRIPLQKGARSLNVAIAAAMV"
BASE COUNT          487 a          804 c          890 g          418 t
ORIGIN      
        1 caaacctcgg catagacctg gtagccgcgc tgggcggcgg cgcggtcgaa agtgccgaac
       61 gggcccgcga agtgccagtg gcgatgcggc ggatgctcct cggattcggc ggcgatggcc
      121 atggcacccg cggtcagggc agccagcgca atggcgccgg agacaatgag tttgcgcata
      181 tctctagacc gccttcttct tgagcaccgc gtcggcgatg ctgggcggca tcggcaacgg
      241 ccgttcgatc ttgcccagga tcggcagcag gatgaggaag tggaagaagt agtagagcgt
      301 gccgacctgg gccaacggca cgtagtagcc ctccggcggg ttggcgccgc agatgcccag
      361 gacgatcacg tcgaccacga ggaccggcat gaaccacttg tagatcggcc ggaacgtcga
      421 cgagcgcacg cgcgaggtgt cgagccaggg cagcaggaac agcacggcga tcgagccgaa
      481 catggcgatc acgccggcca gcttgtcggg gatggcgcgc aggatggcgt agaacggcag
      541 gaagtaccat tccggcacga tgtgggtggg cgtcaccagc gggttggccg ggatgaagtt
      601 ggccggatcg ccgagctcgt cgggcgcgaa gaagacgaaa ccggcataga cgatcaggaa
      661 gatcgtcagc ccgaagccgt ccttcatggt gtagtaggga tggaacggca cggtgtcctg
      721 cgggcccttg ggatcgatgc ccagcggatt gttcgagccg tgcacgtgca gcgccacgac
      781 atgcagcccg accacgccga cgatgaggaa cggcagcagg tagtgcagcg agtagaagcg
      841 gttgagcgtc gggttggcga cggcgaagcc gccccacagc cagtcgacga tcgactggcc
      901 gaccaccgga atggccgaga acaggttggt gatgacggtg gcgccccaga agctcatctg
      961 gccccatggc agcacgtagc ccatgaacgc cgtcgccatc atcaggagca ggatgacgac
     1021 gcccaggatc cacagcagct cgcgcggcgc cttgtaggag ccgtaataca tgccgcggaa
     1081 gatgtggatg tagacggcga tgaagaagaa cgacgcgccg accgcgtgca ggttgcggat
     1141 cacccagccc gacggcacgt cacgcatgat gcgctcgacc gagtcgaagg ccatcgtcac
     1201 gtgcggcgtg tagttggtcg ccagcacgat gcccgtcacg atcatgagca ccagcatcac
     1261 cgtggcgatc gcgccgaaat tccagaagta gttgaaattc ctgggcgtcg ggaaggtgcg
     1321 gtactccttc tccatgtacg agaagatcgg caggcggtga tcgatccagg cgatcagctt
     1381 gttgttgaag accggcggcg tgccgtgaga cgaggccatt aaaagctccc cgaagaatcc
     1441 ggccggcgat cagccgacgc ggaccagagt gtcggacgcg aaaaggtacg gcggaatttc
     1501 caggttcttg ggcgccggtc cctggcggat gcgtcccgac gtgtcgtagg ccgagccgtg
     1561 gcaggggcag aaccagccgc cgaacgggcc cttgggatcg cccggcttgt tgccgagcgg
     1621 cacgcagccg agatgagtgc acacgccgat catgatcagc cactccggcc gcaccttctt
     1681 ggcggtgtcg gtgacgcgcg cgttgtcggt ctgcggatcg cgcagctcgg acagcggcac
     1741 cgcctcggcc gtcttgatct cttccggcgt gcgatggcgg atgaacaaag gcttgccgcg
     1801 ccagttcacg gtgatcgcct ggccgacctg caccggttgg atgttcactt cgaccgaggc
     1861 cagcgccagc gtatcggcgg cggggttgag attgttgatg aagggccacg ccgtggcgcc
     1921 gatgccgacg gccccgaggg cgcccgttgc gaccatgagg aagtcgcgcc gggtcgggtc
     1981 gtcgtgcccg ccggccggga tgcttgatga cgccattgtt tctctcttcc gtccccccga
     2041 ggagatgcat tcttagaccg caaaagcgcc ttatgtttca aggctctgtt ggtcgcaggc
     2101 ccaagccgcg gcgggacagc cggcgttctg tgacagcgtg ccgcacaaag ggcgctttcg
     2161 cgccgcggac aagagtagaa caggccatgc gcctcgccct cttcgagccc gacattccgc
     2221 agaacctcgg atccttcatc cgcctggccg cctgtctcgg aacagcgctc gacatcatcg
     2281 aaccgtgcgg ctttccggtc gacgacaagc gcatccgccg cgcggcgatg gactattacg
     2341 acctcgcaag catcgcgcgg catgcctcgt ggcatgcctt tcaacgcgat cggcccgccg
     2401 gccgcctggt cctgctgacc acatcgggcg ccgagacctt ccccggagtc gcctttcgca
     2461 gcgacgatac gctgctgttc ggccgcgaga gcgccggcgt tccgggcgaa gtgcatgagg
     2521 ccgccgacct caggctgcgc attccgctgc aaaagggcgc gcgttcgctc aatgtcgcga
     2581 tcgccgcggc aatggtatt
//
LOCUS       DASWGA010000551         1580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_577349, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000551 DASWGA010000000
VERSION     DASWGA010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577349"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..896
                     /locus_tag="VF991_13105"
     CDS             <1..896
                     /locus_tag="VF991_13105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018209807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557430.1"
                     /translation="VHFIHDGEFLGPFVYALKTTRDMETLQRVYTPDTAKPQPLHFFC
                     LGDAYEFWGLVEGRFHFVCPPEGGHFFWLGTDRLGRDMFSRIVYAARISLTIGIIGIV
                     LSFTLALILGGLAGYYGGWVDMTVQRLTEIIKSFPHLPLWLALSAALPVTWSPLLIYF
                     GITLILALLDWPGLGRAVRSKLLSLREEDYAAAAQMMGAKPGRIIARHLLPGFMSHLI
                     ASATLSIPSMILAETALSFLGLGLRPPITSWGVLLNEATDINVVAVNWWLMLPVVPVI
                     LVILAYQFMGDGMRDAADPYG"
     gene            1166..>1580
                     /locus_tag="VF991_13110"
     CDS             1166..>1580
                     /locus_tag="VF991_13110"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557431.1"
                     /translation="MAPALLEVADLACRRGGRQVFDRLSFALGAGELLALTGRNGSGK
                     TTLLRALALLVRPDAGSIRWQEAVVWSEKGQAEPETWRSRLAWLGHLDGLKGDLSVRE
                     NLLVAERLRGAPPAEDRLDGVLIAFDLLNLAMRPVR"
BASE COUNT          217 a          566 c          485 g          312 t
ORIGIN      
        1 aggtccattt catccatgac ggcgagttcc tggggccgtt cgtctatgcg ctgaaaacca
       61 cgcgcgacat ggaaaccctg cagcgcgtct acacgccgga cacggccaag ccgcagcccc
      121 tgcacttctt ctgcctgggc gatgcttacg aattctgggg cctcgtcgaa ggccgcttcc
      181 atttcgtctg tccgcccgag ggcgggcact tcttctggct cggcaccgat cgcctcggcc
      241 gcgacatgtt cagccgcatc gtctatgccg cgcgcatctc gctcaccatc ggcatcatcg
      301 gcatcgtgct gtccttcacc ctggcgctga tcctgggcgg gctagccggc tattacggcg
      361 gctgggtcga catgaccgtc caacgcctca ccgagatcat caaaagcttc ccgcacctgc
      421 cgctgtggct ggcgctgtcg gcggcgctgc ccgtcacctg gtcgcccttg ctgatctact
      481 tcggcatcac cctgatcctg gccctgctcg actggccggg cctcggccgc gccgtgcgct
      541 ccaagctgtt gtcgctgcgc gaggaggact acgccgccgc tgcccagatg atgggcgcca
      601 agcccggccg catcatcgcc cgccacctgc tgccgggctt catgagccat ctcatcgcct
      661 cggccacgct ttccatcccc tcgatgatcc tggccgagac ggcgctcagc ttcctcggcc
      721 tgggcctcag gccccccatc acctcgtggg gcgtgctttt gaacgaggcg accgacatca
      781 atgtggtggc ggtgaactgg tggctgatgc tgccggtcgt gccggtcatc ctggtgatcc
      841 tggcctacca gttcatgggc gacggcatgc gcgacgcggc ggacccctac ggctgaccgg
      901 gctggcaaga ggaagctctc aagctcctga tttccctaac caaacgccaa ttcacccacg
      961 tttttgactg tgattaagaa atcacacttc cgccccattt gggtctagcg agagccgtca
     1021 ggggtttcca tgttcggctt gtatctcccc cgaacgtggt ccccccaaag ccacgttcta
     1081 gcctcttcgg aggcgctcgg ccgtcctctc actctccccc gagaggacgg ccttttcttt
     1141 gctcccgtgc taggacggcg cctgcatggc gccggctctc ctcgaggtcg cggatctggc
     1201 ttgccgccgc ggcggccggc aggtgttcga ccgcctgtcc ttcgccctgg gcgccggcga
     1261 gcttttggcc ctgaccggcc gcaacggcag cggcaagacc accctgttgc gggcgctcgc
     1321 gcttctcgtc cggcccgacg ccggctcgat ccgctggcag gaggccgtag tctggagcga
     1381 gaaggggcag gccgagccgg agacctggcg tagccggctg gcctggctcg gccatctcga
     1441 cggcctgaag ggcgacctgt cggtgcgcga aaaccttttg gtcgccgagc gcctgcgcgg
     1501 cgcgccgccg gcggaggacc ggctcgatgg cgtcctgatc gccttcgatc tcttgaacct
     1561 ggcgatgcgg cccgtgcgcg
//
LOCUS       DASWGA010000552         4910 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1206555, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000552 DASWGA010000000
VERSION     DASWGA010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4910
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1206555"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1641
                     /locus_tag="VF991_13115"
     CDS             <1..1641
                     /locus_tag="VF991_13115"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEX9557432.1"
                     /translation="FSGSAGLAIVLADRAAIFIDGRYTLAVRGQVDTNAFVPHQIPEQ
                     SPEAWIAENLPKGGKLGFDPWLQTVDGHERFARACQRAGAEFVPVDSNPVDAVWPDRP
                     PAPLAPVLPHPDELAGESSVAKRTRIAAAVKAKGADVALITAPDSIAWLLNVRGGDVP
                     RTPFALGFALAHGDGHVDLYMDRRKVPARTLGWLGNAVTLAPPDELGLALDMLGRLNK
                     RVLIETATAPMWAASRLQTAGVTVVRDADPVALPKACKNAVELDGIRRAHRRDGAAVS
                     RFLAWLARESRSGRLREIEASDRLQALRQETGKLRDLSFDTISGAGPNGAIVHYRASA
                     GSERTLEPGSLYLVDSGGQYRDGTTDITRTVAIGTPSPEMRDRFTRVLKGHIALAMAR
                     FPAGTTGSQVDALARYALWQAGLDYDHGTGHGVGAYLAVHEGPQRISKAANTVALQPG
                     MIVSNEPGYYKAGAYGIRIENLLAVREATIEGADRAYLEFETLTLAPIDLNAVEPGLL
                     TDTERGWLNDYHRRVRETVGPKVDEATRAWLAEATRAI"
     gene            1722..2954
                     /locus_tag="VF991_13120"
     CDS             1722..2954
                     /locus_tag="VF991_13120"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008142234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX9557433.1"
                     /translation="MTTFPDLPTFVTHLECAMTGEKLRPDVPHNLSPAGFPILVRYDL
                     AGVRRALTKDKLADRAPDWWRYRELLPVRRAENIVSLGEVMSPLISMPRFAKSLGVSG
                     EVIIKDEGRLPTGSFKARGLALAVCMAKEFGIRKMAMPTNGNAGAALAAYGSRAGIET
                     VVFCPDDTPVVNVNEIAECGARVYKVNGLINDCGRLVGAGAAQAGWFDTSTLKEPYRI
                     EGKKTMGLELAEQLDWQLPDVILYPTGGGTGLIGMWKAFAELEAIGFIGKKRPRMIAV
                     QAAGCAPIVRAFESNSRHAELWENAHTVAAGIRVPAAIGDFLILDAVRESGGFAIAVE
                     DRSISSTLDEIARLDGVLLCPEGAATCAAYRQALADGRIKKTDNVVLFNCATGLKYPM
                     ADGGQPLDRHASIDFARL"
     gene            3376..4320
                     /locus_tag="VF991_13125"
     CDS             3376..4320
                     /locus_tag="VF991_13125"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9557434.1"
                     /translation="MKKVLLAAAAVVALPAIAQAQQDVYAPGVYFGVEGGLNWLFNTT
                     ILGQNVSSQTGWAAGGKIGYDFIGPRIEVEGLYRQNNNGYFFGNRAITGQISQVTAMA
                     NFLYDFNATGTIVPFIGAGAGVGFVDSDFNLGSTVFAFQGILGVGYNFSPNLRFGIEG
                     RYIGTTNPSVAGVNWSNNNAAVLASVQVKFGAVAAPPPPPPPAVTPPSFMVFFDWDRS
                     NLSQQALVTIKQAADAFKAKGSARITATGHTDTSGPEAYNMALSLRRANAVKDALVRE
                     GVPAAAITVIGKGETGLLVQTGDNVREPQNRRVEIVIQ"
     gene            complement(4585..>4910)
                     /locus_tag="VF991_13130"
     CDS             complement(4585..>4910)
                     /locus_tag="VF991_13130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557435.1"
                     /translation="CFCRLDSPEEISEAWAALRESRANMWFMIQYAFGAVDVVKLHLL
                     NSCAIAVGYTGRRCGKPVGLIGLIRDGDFLPIPAKLTKMVGGAPHFALHTAKCFNELR
                     GPIST"
BASE COUNT          909 a         1574 c         1557 g          870 t
ORIGIN      
        1 ttcagcggct cggccggtct cgccatcgtg ctggccgacc gcgcggcgat cttcatcgac
       61 gggcgctaca cgctcgccgt gcgcggccag gtcgacacca acgccttcgt gccgcaccag
      121 atcccggagc agtcgccgga agcgtggatc gccgagaacc tgccgaaggg cggcaagctc
      181 ggcttcgatc cctggctgca gacggtcgac gggcacgagc gcttcgcgcg cgcctgccag
      241 cgcgccgggg ctgagttcgt gccggtcgat tccaatcctg tcgacgcagt gtggcccgac
      301 cggccgccgg cgccgcttgc gcccgtgctg ccgcatcccg acgaattagc cggcgagagc
      361 agcgtggcca agcgcacgcg catcgcggct gcggtgaagg ccaagggcgc cgacgtcgcg
      421 ctgatcaccg cgcccgattc gatcgcctgg ctcctgaacg tgcgcggcgg cgacgtgccg
      481 cgcacgccgt tcgcgctggg cttcgcgctg gcgcatggcg atggccatgt cgatctctac
      541 atggatcgcc gcaaggtgcc tgcccgcacg ctgggctggc tgggcaacgc cgtgaccctg
      601 gcgccgcccg acgagctggg cttggccctc gacatgctgg gccggttgaa caagcgcgtg
      661 ctgatcgaga ccgcgaccgc gccgatgtgg gcggcgagcc gcctgcagac ggctggcgtc
      721 accgtggtgc gcgacgccga cccggtggcc ctgcccaagg cgtgcaagaa cgccgtcgag
      781 ctcgacggca tccgccgcgc ccatcgccgc gacggcgccg cggtcagccg tttcctcgcc
      841 tggctggcgc gcgagtcacg gagcggcagg ctgcgcgaga tcgaagcgtc ggaccgcttg
      901 caggcgctgc gccaggaaac cggcaagctg cgcgacctga gcttcgacac catctccggc
      961 gccggaccca atggggccat cgtgcactac cgcgcctcgg cgggcagcga gcgcacgctc
     1021 gagccgggca gcctctatct ggtcgattca ggcgggcagt accgcgacgg cacgaccgac
     1081 atcacccgca ccgtggcgat cggcacgccc agccccgaaa tgcgcgaccg cttcacgcgg
     1141 gtgctgaagg gccatatcgc gctcgccatg gcgcgcttcc cggccggcac gaccggctcg
     1201 caggtcgacg cgctggcgcg ctatgcgctg tggcaggccg gactggacta cgaccacggc
     1261 accggccatg gcgtcggcgc ctatctcgcg gtgcatgaag gcccgcagcg catctccaag
     1321 gcagccaaca ccgtcgccct gcagcccggc atgatcgtca gcaacgagcc gggctactac
     1381 aaggccggcg cctacggcat acgcatcgag aaccttttgg cggtgcgcga ggccacgatc
     1441 gagggcgccg accgcgccta cctcgagttc gagaccttga ccttggcgcc gatcgacctc
     1501 aacgccgtcg agcccggtct gctgaccgac accgagcggg gctggctcaa cgattatcac
     1561 cgccgcgtgc gcgagacggt ggggcccaag gtcgacgaag cgacgcgggc gtggcttgcc
     1621 gaggcgacgc gcgccatctg acacagatga tgccaaggca tcatgatctg aaatcgcaca
     1681 tcgtttgact gctctgcgcc ataggcgaag aaagcgagac catgacgacc ttcccggatt
     1741 tgccgacatt tgtgacgcat cttgagtgcg cgatgaccgg tgaaaaacta cgcccggacg
     1801 ttcctcacaa tttgtcaccg gccggctttc cgatcctggt gcgctacgat ctagccggcg
     1861 taagaagggc cctgaccaag gacaaacttg ccgatcgtgc accagattgg tggcgctatc
     1921 gcgagttgct gcccgtgcgc agagccgaaa atatcgtgtc tctcggagag gtgatgagtc
     1981 ctctcatttc gatgccccgc tttgccaaat cgctgggcgt gtcgggcgag gtcatcatca
     2041 aagacgaggg ccgactgccg acagggtcat tcaaagctcg cggattggcg ttggccgtct
     2101 gcatggccaa ggagtttggc attcgaaaaa tggcaatgcc gaccaacggc aacgccggcg
     2161 cagctctggc agcctatggc agtcgggctg gcatcgagac agtggtgttt tgcccggacg
     2221 atacgccggt cgtgaatgtc aacgaaatcg ccgaatgcgg tgcgcgcgtc tacaaggtca
     2281 atgggcttat caacgactgc ggccggctgg tcggcgccgg cgccgctcag gccggatggt
     2341 tcgatacttc caccctcaaa gagccctatc gcattgaggg caagaagacg atggggctcg
     2401 aacttgccga gcagctcgat tggcaattgc ccgatgtgat tctttatccg accggagggg
     2461 gcactggact gattggaatg tggaaggcat tcgccgaact ggaggcgatt gggttcattg
     2521 gcaagaagcg gcccaggatg attgccgtgc aagctgcggg gtgcgcgcca atcgttcgcg
     2581 ccttcgagag taacagccgt catgccgagc tttgggaaaa tgcgcatacc gtggcggccg
     2641 ggattcgcgt gcctgccgca atcggcgatt tcctcattct cgatgccgtt cgcgagtccg
     2701 gcggcttcgc catcgccgtc gaagaccgct caatttcgtc gacgcttgat gaaattgctc
     2761 gactggacgg agtcctgctg tgtcccgaag gcgcagcgac ctgtgccgcc tacaggcagg
     2821 ctctagccga tggccgaata aagaaaacag acaatgtcgt gctgttcaat tgcgcaaccg
     2881 gactgaagta cccgatggct gatggcggcc aacctctcga tcgacatgcg tccattgatt
     2941 tcgcgcgcct ttgacggggc gttcgacggc ggctggggac tctaggcgac ccgcaggctc
     3001 gatgttgccg gcgggtgttt tgggtcaccg attcgggcgc cttggccagt cgagacgcta
     3061 tgtgcagccc tcttgcagga acccgccata cgccttccca atacctgtcg acaggctatt
     3121 gcctggggat cgggggcgca aaggcctgaa agtatctgaa gtgttcatgc aaatacagaa
     3181 aaagagggcc ctaaaagcta gatttttcaa catattttca ggagtgttac ctcaggacca
     3241 cagttgggca acaatgcgtc aatggcggtt ccatttggtg gcgactgcaa taacgagcgc
     3301 gtagaatttg ccggcgacgc aatcgtttag cccgcgaagc aacctctctg aaattcttcg
     3361 acgaggagat actgtatgaa gaaggtccta ctagcggcgg ctgcggtggt ggcactgccg
     3421 gccatcgccc aggcccaaca agatgtttat gcccctggcg tctacttcgg cgtcgaaggc
     3481 ggcctaaact ggttgttcaa caccaccatc ctgggccaga acgtcagctc gcagacgggc
     3541 tgggcggccg gcggcaagat cggctacgac ttcatcggtc cgcgcatcga agtcgagggc
     3601 ctgtatcgcc agaacaataa tggctacttc ttcggcaacc gcgcgatcac cggccagatc
     3661 agccaagtca cggctatggc gaacttcctg tacgacttca acgccacggg caccatcgtg
     3721 ccgttcatcg gcgccggtgc gggcgtgggc ttcgtcgatt ccgacttcaa tctcggcagc
     3781 accgtgttcg ccttccaggg catcctcggt gtgggctaca acttcagccc caacctgcgc
     3841 ttcggcattg aaggccgcta catcggcacg acgaacccgt cggtcgccgg cgtgaactgg
     3901 agcaacaaca acgccgcggt gctcgccagc gtccaggtca agttcggcgc cgttgccgcg
     3961 ccgccgccgc cgccgccgcc ggcagtcacg ccgccgtcgt tcatggtgtt cttcgactgg
     4021 gaccgctcga acctgtcgca gcaggccctg gtcacgatca agcaggcggc cgacgccttc
     4081 aaggccaagg gtagcgcccg catcacggca accggccaca ccgacacgtc gggcccggaa
     4141 gcctacaaca tggcgctgtc gctgcgtcgt gccaatgcgg tcaaggacgc cctggtgcgc
     4201 gaaggcgtac cggcggccgc gatcacggtc atcggcaagg gcgagacggg tctcttggtg
     4261 cagaccggcg acaacgtgcg ggagccgcag aaccgccgcg tcgagatcgt cattcagtaa
     4321 gacctcgaga caggcttgag gaaaaggcgg cctgcgggcc gccttttttc tggctgcggt
     4381 tcttttgacg aacgcctctc caaggaactt gacctgccac tgcgctttcc cggcaagccc
     4441 ggcgcttagc cgtcgcgcca tatcgcgccg agtgctcgct gcacggcctt atcagcttcc
     4501 tgtgggccaa ggacacggcc aacatggcgc cccacgttgc tcctgttcct tgtggcgtca
     4561 gagttgctcg gaaggcactc ttgatcaggt agaaataggt ccacgcagct cattgaagca
     4621 tttcgctgta tgcaaagcga aatgcggagc tccgccaacc atctttgtca gctttgcagg
     4681 aatcggcagg aagtcgccgt cgcgaattaa cccgatgagg ccgaccggct tcccgcaacg
     4741 cctgcccgtg tacccgacgg cgatggcaca tgaattcagt agatgaagct taacgacatc
     4801 gacggcgcca aacgcgtatt ggatcatgaa ccacatattg gctcggcttt ctctgagggc
     4861 ggcccatgcc tcgctaattt cctcggggga gtcgagcctg caaaaacaag
//
LOCUS       DASWGA010000553         2464 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_187683, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000553 DASWGA010000000
VERSION     DASWGA010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187683"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..442)
                     /locus_tag="VF991_13135"
     CDS             complement(<1..442)
                     /locus_tag="VF991_13135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557436.1"
                     /translation="MAGDTTLIVTTRSGVRPLGVRGEPLHNAAPQLRRVVRRRLGDAA
                     ADLLAEPQLHEDGKAIDWYAGWPGPVQPLSALAPERRQSVLADIERTLADIRRLGDTL
                     AGAGPREDMGLVGLSLQLAARAPAESFVFVVGERPVIVCWGYEKE"
     gene            complement(516..2384)
                     /locus_tag="VF991_13140"
     CDS             complement(516..2384)
                     /locus_tag="VF991_13140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEX9557437.1"
                     /translation="MAKGKSKKGGRGKRPTSREASRKVAGKAAKAKKPAIRKTALKKK
                     PVVPKPVARPVLRRPVKSRPSVARVPAPRPAPHKAALLSHNIYERDLDKTPANYAALT
                     PLQFIERSASVYPDQVALIHGSRHQSWAETYARCRRLASALEKVGIGVGDTVAIMAPN
                     IPEMYEAHFGVPMSGGVLNSLNTRLDAAMIAFILDHSETKVLLVDREFHRVVTEALAI
                     AKAQPLVVDIDDPACEDRAQIGDTTYEEFLATGDADYAWDYPADEWNAISLNYTSGTT
                     GNPKGVVYSHRGAALSAYGNATQWAMGIHPVYLWTLPMFHCNGWCFPWTLALVAGTSV
                     CLRRTNAATIYSALAEHNVTHMCGAPIVMQFIIGASAEERRPLSRKVEFMTAAAPPPA
                     AVLEALEKENFRVTHVYGLTEVYGPATICSWHEEWDALPAHERAQLKARQGVRYAAED
                     GVTVMDPTTMEEVPRDGATMGEVMFRGNLTMKGYLKNGRATREAFEHGWFHSGDLGVL
                     HEDGYIELRDRSKDIIISGGENISTIEVEGVIIEHPAVANVAVVAKPDEKWGETPCAF
                     VVLKPGAAATVEEIVAHCRANLASYKCPRYVVFRDLPMTSTGKVQKFVLREWAKAI"
BASE COUNT          367 a          842 c          834 g          421 t
ORIGIN      
        1 cctccttctc gtagccccag cagacgatga ccggccgctc gccgaccacg aagacgaacg
       61 actccgccgg cgcgcgcgcc gcgagctgaa gcgagagccc gaccaggccc atgtcctcgc
      121 gcggaccggc gccggccagc gtgtcgccca ggcggcggat gtcggccagg gtgcgctcga
      181 tgtcggccag caccgactgc cggcgctccg gcgccagcgc cgacaggggc tgcacagggc
      241 ctggccagcc ggcgtaccag tcgatcgcct tgccgtcctc gtgcagctgc ggctcggcca
      301 aaagatcggc ggcggcatcg cccaggcggc ggcgcacaac ccggcgcaac tgcggggcag
      361 cattgtgcag cggctcgccg cgcacgccca aagggcgcac gccgctgcgc gtcgtcacaa
      421 tgagtgtggt gtcgccggcc attccagtgg caaaaatagc cggtggatta tggcggggcg
      481 atgttctccc tccgcctccc acggggccaa gggggctata tcgcctttgc ccactcccgc
      541 agcacgaatt tctgcacctt gcctgtcgag gtcatgggca ggtcgcggaa aaccacgtaa
      601 cgcgggcact tgtaggaggc gaggttggcg cggcaatggg cgacgatttc ctccaccgtc
      661 gccgcggcgc cgggcttcag caccacgaag gcgcagggcg tctcgcccca tttctcgtcg
      721 ggcttggcga ccaccgcgac attggccacc gccgggtgct caatgatcac gccctcgacc
      781 tcgatggtcg agatgttctc gccgcccgag atgatgatgt ccttggaacg atcgcgcagc
      841 tcgatatagc cgtcctcgtg cagcacgccg aggtcaccgg aatggaacca gccatgctcg
      901 aatgcctcgc gggtcgcccg tccgttcttc aggtagccct tcatggtgag attgccgcgg
      961 aacatcacct cgcccatggt ggcgccgtcg cgcggcactt cctccatggt cgtcgggtcc
     1021 atcaccgtga cgccgtcctc ggcggcgtag cgcacgccct ggcgcgcctt gagttgcgcc
     1081 cgctcatggg cgggcagcgc gtcccattcc tcgtgccacg agcagatcgt cgccgggccg
     1141 tagacctcgg tcaggccgta gacatgggtg acgcggaaat tctccttctc cagcgcttcc
     1201 agcacggcgg cgggcggcgg cgcggcggcg gtcatgaact cgaccttgcg cgacagcggc
     1261 cggcgctctt cggctgacgc cccgatgatg aattgcatga cgatgggggc gccgcacata
     1321 tgcgtgacat tgtgctcggc gagcgcgctg tagatcgtcg cggcgttggt gcggcgcagg
     1381 cagaccgagg tgccggcgac cagggccagc gtccacggga agcaccagcc gttgcagtgg
     1441 aacatcggca gggtccagag atagaccgga tggatgccca tcgcccattg cgtggcattg
     1501 ccgtaggccg agagcgcggc gccgcggtgg ctgtagacca cgcccttggg attgccggtc
     1561 gtgcccgagg tgtagttgag cgagatggcg ttccattcgt cggccggata gtcccaggca
     1621 tagtcggcgt cgccggtggc caaaaactcc tcgtacgtcg tgtcgccgat ctgggcgcgg
     1681 tcctcgcagg ccgggtcgtc gatgtcgacg accagcggct gggccttggc gatcgccagc
     1741 gcctcggtca ccacgcggtg gaactcgcga tcgaccaaaa gcactttggt ctcgctgtgg
     1801 tcgaggatga aggcaatcat cgccgcgtcg agccgggtgt tgagcgaatt cagcacgccg
     1861 ccgctcatcg gcacgccgaa atgcgcctcg tacatttccg ggatgttggg cgccatgatc
     1921 gccaccgtgt cgccgacgcc gatgccgacc ttctccagcg ccgaggcgag ccgccggcag
     1981 cgcgcatagg tctccgccca gctctggtgg cgcgaaccgt ggatcagcgc cacctggtcg
     2041 ggatagacgc tggcactgcg ctcgatgaat tgcagcggcg tcagtgccgc gtagttggcc
     2101 ggcgtcttgt cgaggtcgcg ttcatagatg ttatgggaca gcagcgccgc cttgtgcggc
     2161 gccggccgcg gcgcgggcac gcgcgccacc gacggtcggc tcttcaccgg acggcgcagg
     2221 acgggccgcg cgacgggctt gggcacgacc ggcttcttct tgagcgcggt cttgcggatg
     2281 gcgggcttct tcgccttggc ggccttgccg gcgactttgc gcgacgcctc gcgcgacgtc
     2341 ggccgcttac ccctgccacc cttcttcgat ttgcccttgg ccatgctcgc tgtcccgttg
     2401 cccgccgatt tgcccccacg cgcgcggcac tttcacacaa agggcagggt ctactccagt
     2461 ttga
//
LOCUS       DASWGA010000554         2846 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_823971, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000554 DASWGA010000000
VERSION     DASWGA010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823971"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..553
                     /locus_tag="VF991_13145"
     CDS             <1..553
                     /locus_tag="VF991_13145"
                     /inference="COORDINATES: protein motif:HMM:NF021941.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEX9557438.1"
                     /translation="WDKLGHRAEHGTLIGQPWPVPAPIDAAADAEIGWLVKLISDIRS
                     ARAELNVPAGAKLKLLVVGANDTTRQRLEAHRAAIERLARIEGIEAASGAPKSALQIV
                     VGEATYALPVGDVIDLKAEGARLQKEIKKLADEVGKIDAKLGNAAFVSRAPEEVVEEQ
                     RERRVQAEQTRTRLSTALERLGA"
     gene            complement(678..1511)
                     /locus_tag="VF991_13150"
     CDS             complement(678..1511)
                     /locus_tag="VF991_13150"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX9557439.1"
                     /translation="MPNMLNASQTAEFNEKGFTYARGLFAPDEVKLLTRAMEEDPAVR
                     GSILDRRDGEGRSTRIALWNRAGDSVYGLAARSQRMVDTSAALLGGPVYHFQSKLTAK
                     EPEVGGAWEWHQDYGYWYYNGCLRPDLLSIMVALDKTTRENGCLQIATGSHRLGRIDH
                     TPLSPTQNEVDPQRMAHILKQCPVEYCELEAGDALIFHCNAIHRSDANRSANRRWTLL
                     ICYNRVDNDTIIKTDDRYFVPLESVDDEAIRKAGLRFARGDNAEHFASRPYVPDLRKA
                     S"
     gene            complement(1625..2788)
                     /locus_tag="VF991_13155"
     CDS             complement(1625..2788)
                     /locus_tag="VF991_13155"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9557440.1"
                     /translation="MTETNPRPLHGLRILDFSTTIAGPHCSRLLADMGADVIKVESPE
                     GDLMRSRPVQRDGAGTMFGQLNAGKRSIVLDLKRPEAIAAVKKLVKVVDIVLENYRPG
                     VMKRLGLDYPELAKINPRIIYGAISGYGQSGPAAGRPAYAPVIHASTGYDMAHLFYQQ
                     GRERPDNCGIFVADYASGAYALGGILAALHQRHVTGKGQMVDVSMFETLVGMLLGEVN
                     RAQFDFEMPSRPMYGPVEAKDGYVMLATASERTFQDMATAAGRRDWLSDPRFEKYADR
                     RMNWGQFVDEFEQWSKTLTVKECVAALEKHGVPCSPYLTVTEALQDPQVAHRGSLCTI
                     EDSAGAYKSPAPPFRFSGSPLQSGPKVAKLGEDTKSVLSEAGLTPAEIEALLK"
BASE COUNT          461 a          940 c          954 g          491 t
ORIGIN      
        1 gtgggacaag ctcggccatc gcgccgagca tggcaccctg atcggccagc cctggcccgt
       61 gccggcgccc atcgacgcag cggccgacgc cgagatcggc tggctggtga agctgatctc
      121 cgacatccgc tcggcccgcg ccgagctgaa cgtcccggct ggcgccaagc tcaagctgct
      181 ggtcgtgggc gccaacgaca cgacgcggca gcggctcgaa gcgcaccgcg ccgcaatcga
      241 gcggctggcc cgtatcgaag gcatcgaggc ggcgtccggc gcgcccaaga gcgcgctgca
      301 gatcgtggtg ggcgaggcga cctacgctct gccggtcggc gacgtcatcg acctcaaggc
      361 cgagggcgcg cggctgcaaa aggaaatcaa gaaactcgcc gacgaagtcg ggaagatcga
      421 tgccaagctc ggcaacgccg ccttcgtctc gcgggcgccg gaagaggtgg tcgaggagca
      481 gcgcgagcgc cgcgtccagg cggagcagac ccgcacccgc ctcagcacgg cgctggagcg
      541 gctgggcgcc tagctcttcg cggtgcgcgc gagcctttca tgtcatcctg agcgaagcga
      601 aggatctcat cgccgcttgc cacaggcatg agatccttcg cttcgctcag gatgacaact
      661 tctgattctg cccgatatta cgacgccttg cgcaggtccg gcacgtacgg ccggctggcg
      721 aaatgttccg cattgtcgcc gcgggcgaag cgcaggccgg ctttgcgaat ggcctcgtca
      781 tccaccgact cgagcggcac gaagtagcgg tcgtcggtct tgatgatcgt gtcgttgtcg
      841 accctgttgt agcagatcag cagggtccag cgccggttgg ccgagcggtt ggcgtcggag
      901 cggtggatgg cgttgcagtg gaagatcagc gcatcgccgg cctcgagttc gcaatactcg
      961 accgggcact gcttgaggat gtgcgccatg cgctggggat cgacctcgtt ctgggtcggc
     1021 gacagcggcg tgtggtcgat gcggccgagc ctgtgcgatc ccgtcgcgat ctgcaggcag
     1081 ccattctcgc gcgtcgtctt gtcgagcgcg accatgatcg acagcaggtc gggcctgagg
     1141 cagccgttgt aataccagta gccgtaatcc tgatgccatt cccaggcgcc accgacttcg
     1201 ggctccttgg ccgtgagctt ggactggaag tggtacaccg gcccgcccag cagcgccgcc
     1261 gaggtgtcga ccatgcgctg gctgcgcgcg gcgagcccat agactgaatc gccggcacga
     1321 ttccacagcg cgatgcgcgt cgagcggcct tcgccgtcgc ggcggtccaa aatgctgccg
     1381 cgcaccgcgg gatcttcctc catggcgcgt gttaaaagct tcacctcgtc gggcgcgaac
     1441 aggccgcggg cataggtgaa gcccttttcg ttgaactcgg ccgtctgtga ggcattcagc
     1501 atgttgggca tggcttcctc ggcctaaagc gggcggaaga cgatgcgacc gtctttctcc
     1561 gtgaccgaca ctctacgccc aagctgctcg ttcgtcagca tgtcggccag cgcgcgcgga
     1621 tcgatcattt cagcagcgcc tcgatctcgg cgggggtcaa tccggcttcg ctgagcacgc
     1681 tcttggtgtc ctcaccgagt ttcgccactt tcggcccgct ttgcagcggc gagcccgaga
     1741 agcggaacgg cggcgccggc gatttgtagg cgccggcgct gtcctcgatg gtgcacagcg
     1801 agccgcgatg ggcgacctgg ggatcctgca aagcctcggt cacggtgagg tagggcgagc
     1861 agggcacgcc gtgcttttcc agggccgcga cgcactcctt gacggtgagc gtcttcgacc
     1921 actgctcgaa ctcgtcgacg aactggcccc agttcatccg ccggtcggcg tatttctcga
     1981 agcgcgggtc gctcagccag tcgcgccgtc cggccgcggt cgccatatcc tggaaggtcc
     2041 gctcgctcgc cgtcgccagc atgacgtaac catccttggc ctcgaccggc ccgtacatcg
     2101 gccgcgacgg catctcgaag tcgaactgcg cgcgattcac ttcgcctaaa agcatgccga
     2161 ccagggtctc gaacatcgac acgtcgacca tctggccctt gccggtgacg tgacgctggt
     2221 gaagcgccgc caggatgccg cccagggcat aggcgccgct ggcatagtca gcgacgaaga
     2281 tgccgcaatt gtccggccgc tcgcggccct gctggtagaa aagatgcgcc atgtcgtagc
     2341 cggtcgaggc gtggatgacc ggggcatagg ccggccgtcc ggcggcgggt ccgctctggc
     2401 cgtagcccga gatggcgccg tagatgatcc tgggattgat cttggccagc tcgggatagt
     2461 cgagccccag ccgcttcatc acgcccggac ggtaattctc cagcacgatg tccacgacct
     2521 tcaccaactt cttcaccgcg gcgatcgcct cgggccgctt gaggtcgagc acgatcgagc
     2581 gcttgccggc gttgagctgg ccgaacatcg tgcccgcccc gtcgcgctgc accggccggc
     2641 tgcgcatcag gtctccctcg ggcgattcga ccttgatcac gtcggcgccc atgtcggcca
     2701 gcaggcggct gcaatgcggg ccggcgatgg tggtggagaa gtccaggatg cgcaggccgt
     2761 gcagcggccg ggggttcgtt tccgtcatcg ggtcaccggg caatcaggat gagtacgacc
     2821 ccgccgacca ccaggatgct gccgac
//
LOCUS       DASWGA010000555         6268 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_577906, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000555 DASWGA010000000
VERSION     DASWGA010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6268
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577906"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1270)
                     /locus_tag="VF991_13160"
     CDS             complement(<1..1270)
                     /locus_tag="VF991_13160"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9557441.1"
                     /translation="MKRPVACFAALWTAAALAACSYPIRNDAIGPGSRPQYEWGSLAP
                     GDLQDTLVVVTASGGGTRATALTMSVLRAMDKIKLASGASLADEIDILSSVSGGSVTA
                     GYFALYGAAGLPTLEKNFVRQDGMRAIIAEGLNPVGLALLATPSKERIDLFVDYLDRQ
                     LFHDVTFEKLVERKRRPYLILNAADMVEGTPFPFTQYTMDLLCSDLTKMKLSTAVAAS
                     AAFPVALSPITLKNYRTVKNEPPCPVRKPGWLKPAEGTSWYLDPPRVAWQRTASAYAD
                     GQKKFIHLLDGGIADNLGVSEPYRLLTSDDVDPPFKQNILSGKIKKIVFIMINARSFA
                     PSDLDNTQATPSALAMLTASIGSSIDRATFSTSERIRSLLTERLRGMAADIEREANKP
                     GRPMADVLRTYAANLRTAAGNTQFITVDFDA"
     gene            complement(1290..1523)
                     /locus_tag="VF991_13165"
     CDS             complement(1290..1523)
                     /locus_tag="VF991_13165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557442.1"
                     /translation="MIEPRNRQIYVNGVYNNPLGPTPTLITLNAGSHIFETLTSEPGP
                     RLVDFAGAVDNVPELGSETIDLSPVVPPKPKGT"
     gene            complement(1601..2482)
                     /locus_tag="VF991_13170"
     CDS             complement(1601..2482)
                     /locus_tag="VF991_13170"
                     /inference="COORDINATES: protein motif:HMM:NF020032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557443.1"
                     /translation="MSASERLVVLATAADQPDITASDKLYAEALKRRGVNVAGAPWDG
                     PRAAFEGATAVVIRSTWGYYRAAESFRDWTEAMAAATLLFNPIALARWNLRKDYLGKL
                     AAAGVRVPHSHFVAAEIDAIEKAFAQTGWARAVVKPATGASGYSVELVARGDVAAAVT
                     RLPAEARSAGVLVQEFLPEIDDGELSLVYFDGVFSHAVRKRPPNGEFRVNSRFGATRS
                     PETPSHDVAEQGAKALRALPELPLYARVDGVIRDGELIVIEVEVLEPALFMEFDPAAA
                     ERFADGTMRRLDDGRLR"
     gene            complement(2469..3536)
                     /locus_tag="VF991_13175"
     CDS             complement(2469..3536)
                     /locus_tag="VF991_13175"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEX9557444.1"
                     /translation="MAWRARFYDGETAQVHEVSARPTTSELVIFRPADSGIVARWPIG
                     ELAVLGDLVHEVVPPVVRRGAEARLLVDDPELRRQLAASVPQLSPLAAPPPAPGRRIA
                     AFGVTLAALVGLFWLGVDYGSEYAAPLLPHGLQAKLGESVFEELTADKDECHGKAGLA
                     AINGLANRLARAADYPHEITVHVMAGGPVNAFTLPGGILVIYFDLIDQAKDSAQVAGV
                     LAHEIGHVVHYHPMKGLARQYGIDLIAKLVSGGYSDLLNTLTSGGNLLLALRNGRAFE
                     READATGVALLEKLGLRADGIASFFEQMMDKEPKDAAAGAGIWSSHPPTAERIAATRR
                     PAAGRPAFTDVEWRALRNVCK"
     gene            complement(3536..4726)
                     /locus_tag="VF991_13180"
     CDS             complement(3536..4726)
                     /locus_tag="VF991_13180"
                     /inference="COORDINATES: protein motif:HMM:NF017770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HEX9557445.1"
                     /translation="MSDTTSPWGQAVIQPAAAAAATVAELTPSRPVYDGKLGELYAIY
                     LRHLVLMVLTLGWSRFWGRTRLRRYLWNHLAVLGDRFEYRGRGLELLVGFLLVLVMLA
                     VWGGAMWLVWVYVFREKPFASFGLFDIFSLSVALIGFPLAYVGHYAGLRYRLSRTRWR
                     GIRCAMAGSAWRYGASATFLTFANAMTGQLLTPVVSVNLTRPRVANVRFGTLPFSFAG
                     SAGDIYGRYLGFYFLNIIAWLVAAGIALAAIGGTVEGLGVSSDEVGKLFSQPGLRTVL
                     IVAAVAIGAYMVFSLLILPLRCWWQAYWLRYLVSHSRAGNVLFATAISTRQMWGFLVV
                     NYLIVVLTLGLGWPWVMHRTLRLIAAQLWLYGAPDGAAIRQPADRGPRYGEGLLDMFD
                     VSGV"
     gene            4828..>6268
                     /locus_tag="VF991_13185"
     CDS             4828..>6268
                     /locus_tag="VF991_13185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEX9557446.1"
                     /translation="MTPPKRDKPWLIRTYAGHSTAAKSNELYRTNLGRGQTGLSVAFD
                     LPTQTGYDSDHALAKGEVGKVGVPISHLGDMRTLFDGIPLDRMNTSMTINAPAAWLLA
                     LYIATAEAQGVARAKLQGTTQNDVIKEYLSRGTYIFPPEPSLRLTADTIGFTYREVPK
                     WNPMNVCSYHLQEAGATAVQELAFSLANAIAVLDAVRARGQVPDADFPQVVGRISFFV
                     NAGIRFVTEMCKMRAFAELWDELTRSRYGVLDPKQRLFRYGVQVNSLGLTEQQPENNV
                     YRILLEMLAVVMSKNARARSVQLPAWNEALGLPRPWDQQWSLRLQQIVAFETDLLEYG
                     DIFDGSSEIARKVEELKAEALAEMARIADMGGAVAAIEAAYMKQRLVESNLKRLSAIE
                     AGEQTVIGVNAYTEAEPSPLSAGASILTVDATVEQDQIERLKAWRAARDGKAVKQALD
                     ELAAAAKEDRNIMPASIAAAQAGVTTGEWT"
BASE COUNT         1127 a         2081 c         2105 g          955 t
ORIGIN      
        1 tggcgtcgaa gtccacggtg atgaactgcg tgttgccggc agcggttctg aggttcgcgg
       61 cgtacgtgcg caagacgtcg gccatgggcc gacccggctt gttggcttcg cgttcgatat
      121 cggcggccat gccgcgcaat cgttcggtca gcagggagcg gattcgctcc gaggtgctga
      181 acgtcgcccg atcgatggac gagccgatcg atgccgtcag catggcgagc gcgctgggcg
      241 ttgcctgcgt gttgtcaaga tcggacggcg caaacgagcg cgcgttgatc atgatgaaga
      301 cgatcttctt gatcttgccg gagaggatat tctgcttgaa cggcggatcg acatcgtcgc
      361 tggtcaacag gcggtagggt tcgctgacgc cgagattgtc ggcaatgccg ccatcgagca
      421 gatggatgaa tttcttctgc ccgtcggcgt aggccgaggc ggtccgctgc catgccacgc
      481 gcggcgggtc gagataccag ctcgtcccct ccgccggctt cagccagccg ggcttgcgga
      541 cggggcaagg cggctcgttc ttcacggtcc ggtagttctt cagggtgatc ggcgagagcg
      601 cgaccggaaa ggccgccgag gcggcgacgg cggtcgagag cttcatcttc gtgagatcgc
      661 tgcacagcag atccatggtg tattgcgtga acgggaatgg cgttccctcc accatgtccg
      721 cggcgttgag gatcaggtaa ggacgtcgct tgcgctcgac cagcttctcg aaggtgacgt
      781 catggaagag ctgtcgatcg agatagtcga cgaacaggtc gatgcgctcc ttggacggcg
      841 tcgccagcag ggcgagcccg accgggttca atccctcggc aatgatggcg cgcatgccgt
      901 cctggcggac gaaattcttc tccagggtcg gaagaccggc ggcgccatac agcgcgaagt
      961 agccggcggt gacgctgccg cccgacaccg acgacaggat gtcgatctca tccgccaggc
     1021 tcgcgccgga ggcgagcttg atcttgtcca ttgcccgcag caccgacatc gtcaacgccg
     1081 tcgcccgcgt gccgccgccc gaggcggtga cgacgacgag cgtgtcctgc aggtcgccag
     1141 gcgccagcga cccccattca tactggggac ggctgccggg gccgatggcg tcgttgcgga
     1201 tcggatagga gcaggccgcg agcgcggccg cggtccacag cgcggcgaag cacgctacag
     1261 ggcgcttcat gggtctcctc tccttgggct caagtcccct tcggcttggg cggaacgacc
     1321 ggcgacaggt cgatggtttc gctgcccagt tcaggcacgt tgtcgacggc acccgcgaaa
     1381 tccacgaggc gcggacccgg ctcggacgtc aacgtctcga agatgtgcga tccggcattc
     1441 agggtgatca gcgttggcgt cggcccgagc ggattgttgt aaacgccgtt gacgtagatt
     1501 tgccgatttc tgggctcgat cacggtaacg aaaatcatgg ttccccccgg tcgccttaca
     1561 tcctgaggat gagtgaccaa actagaacgc aatcctcggt tcagcgcaag cggccatcat
     1621 cgagtcgtct catcgtcccg tcggcgaatc gttcggccgc tgctggatcg aactccatga
     1681 atagcgccgg ctccaggact tcgacctcga tcacgatcag ctcgccgtcg cgtatcacac
     1741 catcgactcg ggcgtagagc ggcagctcag gcagcgcgcg caatgccttt gccccctgct
     1801 ccgccacgtc gtgcgacggc gtctcggggc tgcgcgtggc gccgaagcgc gaattgaccc
     1861 ggaactcgcc attcggtgga cgcttgcgaa ccgcatgact gaagacgcca tcgaaataga
     1921 ccagcgacag ctcgccgtcg tcgatctcgg gcaggaactc ctgcaccaac acgccggccg
     1981 accgggcttc ggccggaagc cgggtgaccg ccgcggccac gtcaccgcgc gccaccagct
     2041 cgaccgagta gccgctcgca cccgttgccg gcttcacgac ggcgcgcgcc cagccggttt
     2101 gggcgaacgc cttttcgatc gcatcgatct cggcggcgac gaagtgcgag tgcggcacac
     2161 gcacgcctgc cgcggcaagc ttgccgaggt agtccttgcg caggttccag cgcgccagcg
     2221 cgatgggatt gaagagaagg gtcgcggccg ccatcgcctc ggtccaatcg cggaacgact
     2281 cggcggcgcg gtagtagccc caggtcgacc ggatcacgac cgcggtcgcg ccctcaaagg
     2341 ccgcgcgcgg accatcccac ggcgcgcctg cgacattgac gccgcgccgt ttcagcgcct
     2401 cggcgtagag cttgtcggat gcggtgatgt cgggttggtc ggcggcggtc gcgaggacga
     2461 ccagccgctc acttgcagac attgcgcagt gcccgccatt ccacatcggt gaaagccggc
     2521 cgaccggcag ccgggcgccg ggtcgcggcg atacgctcgg cggtcggcgg atggctcgac
     2581 cagatgcccg ccccggcggc ggcgtccttg ggctccttgt ccatcatctg ctcgaagaaa
     2641 ctggcgatgc cgtcggcgcg cagcccgagc ttctcgagca gcgccacgcc cgtggcgtcg
     2701 gcctcgcgct cgaaggcgcg gccgttgcgc agcgccagca agaggttgcc gccggaggtc
     2761 agcgtattga gcaggtcgga gtagccgccg ctcaccagct tggcgatcaa gtcgatgccg
     2821 tattggcgcg ccaggccctt catcggatgg tagtgcacga cgtggccgat ttcgtgcgcc
     2881 agcacgcccg ccacctgcgc gctgtccttg gcctggtcta taaggtcgaa atagatcacc
     2941 aggatgccgc ccggcagggt gaaggcattg accggtccgc ccgccatgac gtgcaccgtg
     3001 atctcgtgcg gataatccgc ggcgcgggcc agccggttgg ccagcccgtt gatggcggcc
     3061 agtcccgcct tgccatgaca ctcgtccttg tcggcggtca gctcctcgaa cacgctctcg
     3121 cccagctttg cctgcaggcc gtgcggcaac agcggcgcgg catactcgct gccatagtcg
     3181 accccgagcc agaacaggcc gaccagggcg gccagcgtga cgccgaaggc ggcgatgcgg
     3241 cggccgggcg cgggcggtgg cgcggccagc ggcgacagtt gcggcaccga cgcggcaagc
     3301 tggcggcgca gctcgggatc gtcgaccagc aggcgcgcct ccgcgccgcg gcgcaccacc
     3361 ggcggcacca cctcgtgcac gaggtcgccc aggacggcga gttcgccgat cggccagcgc
     3421 gcgacgatgc ccgaatcggc cggccgaaag atcaccagct cgctcgtggt cggccgcgcg
     3481 ctgacctcgt gcacctgggc ggtttcgccg tcgtagaagc gggcgcgcca ggccatcaga
     3541 cgccgctcac gtcgaacatg tcgagcaagc cttcgccgta acgcgggccg cggtcggccg
     3601 gctggcggat ggcggcgccg tcgggggcgc cgtagagcca gagctgggcc gcgatcaggc
     3661 ggagcgtgcg gtgcatgacc cacggccagc ccagccccag ggtgagcacg acaatgagat
     3721 agttcaccac caagaagccc cacatctggc gcgtcgaaat cgccgtggcg aacagcacgt
     3781 tgccggcgcg gctgtgcgag acgagatagc gcagccaata ggcctgccac cagcaacgca
     3841 gcggcaggat caggaggctg aacaccatgt aggcgccgat cgcgacggcg gcgacgatca
     3901 ggacggtgcg caggccgggc tgcgaaaaaa gcttcccgac ctcatccgac gagacgccca
     3961 gcccttcgac cgtgccgccg atggcggcca gggcgattcc cgccgccacc agccaggcaa
     4021 tgatgttgag gaaatagaag cccaggtagc ggccgtaaat gtcgccggca ctgccggcga
     4081 aactgaacgg caaggtgccg aagcggacgt tggcaacgcg cggacgagtg aggttgaccg
     4141 acacgaccgg ggtcagcagc tggccggtca tggcattggc gaaggtgagg aaggtcgccg
     4201 acgcgccgta gcgccaggcc gatccggcca tggcgcagcg gatgccgcgc cagcgcgtgc
     4261 gcgacagcct gtagcgcagc ccggcatagt ggccgacata ggccagcgga aagccgatca
     4321 gcgcgaccga cagggaaaaa atatcgaaca ggccaaagct cgcgaacggc ttttcccgga
     4381 agacataaac ccagaccagc cacatcgctc caccccagac cgccagcatc accagtacca
     4441 gcaggaagcc gaccaggagc tcgaggccgc ggccgcgata ttcgaagcgg tcgcccagca
     4501 cggcgaggtg gttccacaag tagcgccgca gccgcgtgcg gccccagaag cgcgaccagc
     4561 ccagggtcag caccatgagg accaggtggc gcagatagat ggcgtagagc tcgcccagct
     4621 tgccgtcata aaccggccgg ctcggcgtca gctcggccac ggtcgctgcc gcagcagcgg
     4681 caggttggat gacggcttgg ccccagggag aggtcgtatc gctcacagac cgttgcttta
     4741 ctctgtttag actgcgaaat aattgatgct gcgacgcaac atggattgag gtaggcagtc
     4801 tacgcaaccc catttcacct cgccaccatg accccgccga aacgcgacaa gccctggctg
     4861 atccgcacct atgccggcca ttcgacggcg gcgaagtcga acgagcttta ccgcaccaac
     4921 ctgggccgcg gccagacggg cctgtcggtc gccttcgatc tgccaaccca gaccggctac
     4981 gactccgatc atgccttggc caagggcgag gtcggcaagg tcggcgtgcc gatcagccat
     5041 ctcggcgaca tgcgcaccct gttcgacggc atcccgctcg accgcatgaa cacgtcgatg
     5101 accatcaacg cgccggcggc ctggctgctc gctctttata tagccaccgc ggaagcgcag
     5161 ggcgtggcgc gggcaaaact gcagggcacg acccagaacg acgtcatcaa ggaatacctg
     5221 tcgcgcggca cctacatctt cccgcccgag ccgtcgctca ggctgacggc agacacgatc
     5281 ggcttcacct accgcgaggt tcccaagtgg aacccgatga acgtctgcag ctatcacctg
     5341 caggaggcgg gggcgacggc tgtccaggag ctcgccttct cgctggccaa cgccatcgcc
     5401 gtgctcgacg cggtgcgcgc gcgcggccag gtgcccgacg ccgacttccc gcaggtcgtg
     5461 ggccgcatct cgttcttcgt caatgccggc atccgcttcg tcaccgagat gtgcaagatg
     5521 cgggcgttcg ccgagctgtg ggacgagctc acgcgcagcc gctacggcgt tttagacccc
     5581 aagcagcggc tgttccgcta tggggtgcag gtgaattcgc tcgggctgac cgaacagcag
     5641 ccggagaaca acgtctaccg catcctgctg gaaatgctcg ccgtggtgat gagcaagaat
     5701 gcccgcgccc gttcggtgca gctgccggcc tggaacgagg cgctcggcct gccgcgcccg
     5761 tgggaccagc aatggtcgct gcgcctgcag cagatcgtgg ccttcgagac cgacctgctg
     5821 gaatacggcg acatcttcga cggcagcagc gagatcgcgc gcaaggtcga ggagctgaag
     5881 gcggaggcgc tggccgagat ggcgcgcatc gccgacatgg gcggcgccgt ggcggccatc
     5941 gaggcggcct atatgaagca gcgcctggtt gaatcgaacc tcaagcggct gtcggccatc
     6001 gaggcgggcg agcagaccgt catcggcgtc aacgcctata ccgaagccga gccctcgccg
     6061 ctctcggccg gcgcctccat tctcaccgtc gacgccactg tcgagcagga ccagatcgag
     6121 cggctgaaag cgtggcgcgc agcgcgcgac ggcaaggcgg tgaagcaggc gctcgacgaa
     6181 ctagcagcgg ccgccaagga agaccgcaac atcatgcccg cctcgatcgc ggccgcccaa
     6241 gcgggcgtca cgacaggcga atggaccg
//
LOCUS       DASWGA010000556         6754 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_824107, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000556 DASWGA010000000
VERSION     DASWGA010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6754
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_824107"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..767)
                     /locus_tag="VF991_13190"
     CDS             complement(159..767)
                     /locus_tag="VF991_13190"
                     /inference="COORDINATES: protein motif:HMM:NF025850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9557447.1"
                     /translation="MTVKIYGPTASRAARALWIVHELGIPFEHVAMEMKDLKGAEYLK
                     INPNGKVPALVDGDFKLFESMAINLYLAAKHGKDGFFPASLEDQALCHQWSFWGMTEV
                     EKPLLTVLIDKFMTAPDKRKPEAAAEAAKALPKPFAVLNGALQGRDYLLGGGFTVADL
                     NLASICSWAKPIKFDFGPFPNAGAWLDRCLARPAYKAAKGTK"
     gene            complement(828..2165)
                     /locus_tag="VF991_13195"
     CDS             complement(828..2165)
                     /locus_tag="VF991_13195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX9557448.1"
                     /translation="MLSQADNEFLTRSGKGTPMGELLRRFWVPALLSEELPERDGPPK
                     KIKILGEDLLAFRATDGKVGIVEQHCPHRGANLYYGRNEECGLRCAFHGWKFDTDGNC
                     VDLPTSPPESSYKDTIKLLAYPTREWGDMIWVYMGPRERMPELPQLEMGLVPAAQRYV
                     SKKWQDCNWVQSVEGGLDTAHFSFLHAVLTKDEKEALAIYSRSAALGDQSRPDDRVRW
                     VRNDPRPKFSILGHDAGLVIGGARKTDGADLYWRIAQFLMPNHAFAPAAMPGEVYYGQ
                     AWVPVSDTNCWVYTYSWRPDRAFTNSERAQFDGGFGVHSHVDDDYVPLRNLRNDYLID
                     RAQQKSRTFTGITGVSEQDSAIQDSQGPIADRTREHLGPTDLGIVEFRKLVMGAARAL
                     QRGEEPKAAQMAKKYAVRSGGWVTAPDKDLAAVMTERFGHRHGYVGQEYGLGE"
     gene            complement(2165..3454)
                     /locus_tag="VF991_13200"
     CDS             complement(2165..3454)
                     /locus_tag="VF991_13200"
                     /EC_number="2.5.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008935632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase"
                     /protein_id="HEX9557449.1"
                     /translation="MSDKTYGFETLSIHAGAAPDPATGARALPIYQTTAYAFEDADHA
                     AALFNLQTVGFIYSRLTNPTNSALETRLATLEGGRGGTVTSTGHAAQVLALFPLMQPG
                     AEIVASSRLYGGSLQQMRNTYPKFGWTAKIVDADEPENFKRALSPNTKAFFIESLANP
                     GGVISDIEAIARVAETAGVPLLVDNTLATPWLCKPIDYGATLIVHSTTKFLSGTGTSM
                     GGAVIDSGKFDWTRGGKFPSLAGPEPAYHGLNFFETFGDMAYTFHSHAVGLRDLGPSQ
                     SPFNSWITMLGIETLGLRMERHCANAQKVAEYLAKHPAVAWVNYAGLPSNKYHGLAKK
                     YLPKGAGSVFTFGVKGGYDVGVKVVDGVELFSHLANIGDAKSLIIHPASTTHRQLSDE
                     QRLAAGAGPDVLRLSIGIETVDDIIADLEQALAKATS"
     gene            complement(3637..4398)
                     /locus_tag="VF991_13205"
     CDS             complement(3637..4398)
                     /locus_tag="VF991_13205"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX9557450.1"
                     /translation="MLAEVAVVTADRHVMLTGQCKPCCLVDMTDGSPLRIISLFEDLS
                     DAELSTIAASCVIRTYEKQAQILGEQDQTTDVFFILTGTVRFNSYTPTGREVIFNEMS
                     AGGIFGEFAAVDGLPRSSTVLAVSDCRVARMTAKKFFEALEQNGKISVRLIELLVEKI
                     RAMSERLFEVSALAVRERIRRELLRLARDGNQFRNGVVIRPAPTHYEIAARIGSHREA
                     VTREVNRLEAEGIVEVRRRHLRIIDMDRLQKMQEE"
     gene            4590..4934
                     /locus_tag="VF991_13210"
     CDS             4590..4934
                     /locus_tag="VF991_13210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557451.1"
                     /translation="MPPVSRERVDRIFENYLLALAGVDQCSESAPDDVKRRLAANVDQ
                     AERAYTDAAADGLADGLPGIDDEVRSLAQANERSRIALHDGRPIAVVLADLEQGTAHA
                     FAVLKAALSSRL"
     gene            complement(4960..6039)
                     /locus_tag="VF991_13215"
     CDS             complement(4960..6039)
                     /locus_tag="VF991_13215"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HEX9557452.1"
                     /translation="MNNTSRARRPLFAYVGSYTTPERHGQGNGINVYRVDRRSGAFSP
                     VQRLGGLENPSFLAINGAGTHLYSVHGDRTEANSFTIDRQTGHIAPLNRQPTGGYNPV
                     HLAFDATGRFLAIANYGSDSLAVLPIAADGSLLPYRTLTTVTGTLGPHRFQQRTMCVH
                     HIPLDRQGRFFYVPCKGSDAVVAYRLDARRGVLVEAARVAGRPGAAPRHIDFHPRKAL
                     AYVINELDSTVTTYRQDRASGALAPLQTIPSTPSDFTGYSTGAEIWVDRGGRNVYVSN
                     RGHDSIGVFAIDPARGTLSPRQWVPTLGRTPRFFAVDPAQRFLYVANQDSRSIVGYRV
                     GRGGRLAPTRLRVRVGSPACIVFST"
     gene            complement(6075..>6754)
                     /locus_tag="VF991_13220"
     CDS             complement(6075..>6754)
                     /locus_tag="VF991_13220"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX9557453.1"
                     /translation="SRIQQLMDGLRQVSSDIAHDLRTPLGRLRQHLENARARATTTAD
                     YDAATDAAIEEADALLETFSALLRIAQVEAGAQKRGFTDVDLSELVRSVGEAYQPAAE
                     DSEHRLTYKVEDGIHLTGDRQLLAQMISNLVENALHHTQAGSTVSLALRKAGAGFEIE
                     VADNGPGIPESEHERVFDRFYRLDQSRSTAGSGLGLALVKAIAGLHGLTIRLEDRKPG
                     LGIVVAG"
BASE COUNT         1127 a         2112 c         2317 g         1198 t
ORIGIN      
        1 tcgcctgggt gcgtcaggcc accggcagcc tggaactgtt gttcttggcg ctggccgcgc
       61 tgtcggtcgt gattgccctg gtcgcgctgt tgctgccggc cggtgatcgc gcccgcgacc
      121 cggtcctcgc gcaagcagcg ccggcggaat agcgcttcct acttggtccc tttggccgcc
      181 ttgtaggcgg gtcgcgcgag acagcgatcg agccacgcgc cggcgttggg aaacggcccg
      241 aagtcgaact tgatcggctt ggcccagctg cagatcgagg cgaggttgag gtcggccacc
      301 gtgaagcctc cccccagcag gtaatcgcgg ccctgcaggg cgccgttcag cacggcgaac
      361 ggcttgggca gcgccttcgc cgcctcggcg gcggcctcgg gcttgcgctt gtcgggcgcg
      421 gtcatgaact tgtcgatcag caccgtgagc aatggcttct cgacctcggt catgccccag
      481 aagctccact gatggcacag cgcctgatcc tcgagacttg ccgggaagaa gccgtccttg
      541 ccgtgcttgg cggcgagata gagattgatc gccatcgatt cgaacagctt gaaatcgccg
      601 tcgaccagcg ccggcacctt gccgttggga ttgatcttga gatattcggc gcccttgagg
      661 tctttcatct ccatggcgac gtgctcgaac gggatgccga gttcgtgcac gatccacagc
      721 gcgcgcgccg cgcgcgaggc agtgggccca tagatcttga cggtcacagc acagcccccc
      781 aacccaattc ccgggcgacg ataatgcagc gcgccgccgc ggtctaacta ttccccgagc
      841 ccgtactcct gtccgacata gccgtgccgg tggccgaaac gctcggtcat caccgcggcg
      901 aggtccttgt ccggcgcggt gacccagccg cccgagcgca cggcgtattt tttcgccatc
      961 tgtgcagcct tcggctcctc gccgcgctgc agcgcccgcg cggcgcccat caccagcttg
     1021 cgaaactcga cgatgcccag gtcggtcggc ccgagatgct cgcgggtgcg gtcggcgatc
     1081 gggccctggc tgtcctggat cgccgagtcc tgctcgctga cgccagtgat gccggtgaag
     1141 gtccggcttt tctgttgggc gcggtcgatc aggtagtcat tccggagatt gcgcagcggc
     1201 acgtagtcgt cgtcgacgtg gctgtgcacc ccgaagccgc catcgaactg cgcgcgttcg
     1261 gagttggtga aggcgcggtc gggccgccaa ctgtaggtgt agacccagca gttggtatcg
     1321 ctcaccggca cccaggcctg gccgtaatag acctcgcccg gcatcgccgc cggggcgaag
     1381 gcgtggttgg gcatcaggaa ctgcgcgatg cgccagtaga gatcggcccc gtcggtcttg
     1441 cgcgcgccgc cgatcaccag cccggcatcg tggcccagga tgctgaactt cggccgcgga
     1501 tcgttgcgca cccagcgcac gcggtcgtcg ggccgggatt gatcgccgag cgccgccgag
     1561 cggctgtaga tcgccagcgc ctccttctcg tccttggtca acacggcatg cagaaatgag
     1621 aagtgcgccg tgtcgaggcc gccttcgacg ctctgcaccc agttgcagtc ctgccatttc
     1681 ttggagacgt agcgctgcgc cgccggcacc agtcccatct cgagctgcgg cagctcgggc
     1741 atgcgctccc tggggcccat atagacccag atcatgtcgc cccattcgcg cgtcggatag
     1801 gcgagcagct tgatcgtgtc cttgtacgag gattccggcg gcgaggtcgg caggtcgacg
     1861 cagttgccgt cggtatcgaa cttccagccg tggaaagcgc agcgcaggcc gcactcctcg
     1921 ttgcggccgt agtagagatt ggcgccgcga tggggacagt gctgttcgac gatgccgacc
     1981 ttgccgtcgg tcgcgcggaa ggccaggaga tcctcgccta gaatcttgat cttcttgggc
     2041 gggccgtcgc gctcgggcag ctcctcggag agcaacgccg gcacccagaa acggcgtaac
     2101 agctcgccca tcggcgtgcc cttgccgctg cgggtcaaaa actcgttatc cgcctggctc
     2161 agcatcagga cgtcgccttc gcgagagctt gctccagatc ggcgatgatg tcgtccacgg
     2221 tttcgatccc tatcgacagg cgaagtacgt cgggaccggc tccggcggcg agccgctgct
     2281 cgtcggagag ctggcggtga gtcgtcgagg cgggatggat gatcaggctc ttggcatcgc
     2341 cgatattggc caggtgcgag aacagctcga cgccgtcgac caccttgacg ccgacgtcgt
     2401 agccgccctt gacgccgaag gtgaacaccg agcccgcgcc cttgggcagg tattttttgg
     2461 ccagcccatg atacttgttc gacggcaggc cggcatagtt cacccatgct acggcaggat
     2521 gcttggcgag atattcggcg actttctggg cattggcgca atgacgctcc atgcgcagcc
     2581 ccagggtctc gatgccgagc atggtgatcc aggaattgaa cggcgattgg ctgggaccga
     2641 ggtcgcgcag gccgacggca tggctgtgga aggtgtaggc catgtcaccg aaggtctcga
     2701 agaagttcag cccatgatag gcaggttcgg gtccggccag gctcggaaac ttgccgcccc
     2761 gggtccagtc gaacttgccc gaatcgatca ccgcgccgcc catcgacgtg ccggtgccgc
     2821 tcaagaactt ggtggtcgag tgcacgatca gggtcgcgcc gtagtcgatc ggcttgcaca
     2881 gccagggcgt ggccaaggtg ttgtcgacca gcagcggcac gccggccgtc tcggcgacgc
     2941 gcgcgatcgc ttcgatgtcc gaaatgacgc cgccgggatt ggccaggctt tcgatgaaga
     3001 acgccttggt gttgggcgag agcgcgcgct tgaaattctc cggctcgtcg gcatcgacga
     3061 tcttcgccgt ccagccgaac ttcggatagg tgttgcgcat ctgttgcagc gagccgccat
     3121 aaagccgcga ggaggcgacg atctccgcac cgggttgcat cagcgggaag agcgcgagca
     3181 cctgcgcggc gtggccggtg gaggtgacgg tgccgccgcg gccgccttcc agggtggcga
     3241 gccgggtctc gagcgccgaa ttggtcgggt tggtcagccg cgaatagatg aagcccacgg
     3301 tctgcaggtt gaacagcgcc gcggcgtggt cggcgtcctc gaacgcgtag gccgtggtct
     3361 gatagatcgg caaggcccgc gcgccggtgg ccggatcggg agcggcgccg gcatggatcg
     3421 acagggtctc gaagccgtag gtcttgtcgc tcaccggaac tctccatttc tgggggcggg
     3481 acggatcggc tcattccgac cacagcatgc gcagggcgtc aaaccagtga ggcggtggaa
     3541 gcggccgcct gctgctgagc ggcgaatctt gtgtttcgca caggaggcgc tagccaaggc
     3601 gcgatggact gcagaccggt ttgccaaatg gaaaggtcat tcttcttgca ttttctgcag
     3661 tcggtccatg tcgatgatcc gcaggtgccg gcggcgaacc tcgacaattc cctcggcctc
     3721 gaggcggttg acctcacggg ttacggcttc gcggtgggac ccgatccgcg cggcgatctc
     3781 atagtgcgtc ggcgccggcc ttatcacgac gccgttgcga aattgattgc cgtcccgtgc
     3841 caaacgcaac agctcacggc gaatccgctc gcgaacggca agcgcgctca cttcgaacag
     3901 ccgttcggac attgcgcgaa ttttttcgac cagcaactcg atcaggcgaa cggagatttt
     3961 tccattctgt tcgagcgcct cgaagaactt cttggcggtc atgcgggcca cgcgacagtc
     4021 ggacacggcg aggacggtcg atgaccgcgg caagccgtcc acggcggcaa attcaccgaa
     4081 gattccaccc gccgacattt cattgaagat gacttcgcgc ccggtcgggg tatagctgtt
     4141 gaagcggacc gtcccggtca ggatgaagaa tacatccgtc gtctggtctt gctctcccag
     4201 gatctgcgcc tgtttctcat aggtccggat cacgcaggac gccgcgatgg tcgacagttc
     4261 ggcgtccgac agatcctcga acaatgaaat gatgcgaagg ggcgatccgt cagtcatgtc
     4321 gacgagacaa caaggcttgc actggcctgt cagcatgaca tgccggtcgg ctgtgacaac
     4381 cgctacttca gcgagcacat gctttcgacc gggcggaagc tgcggcgttt cgccagatga
     4441 taggctaagc ccttgtgaac aaaggaattg gtccggtcga cagggctgag tgtgggaaat
     4501 gccacagatt gcagggcggc cgtgacgcac agacggtgtg tcgtggcgga tcggtcggcg
     4561 cacgcgggaa aacaaggaag gaggtcggca tgccgcctgt gtcgagggag cgtgtcgatc
     4621 gaatattcga gaattatttg ctggcgctcg ccggggtgga tcaatgttcg gagagcgccc
     4681 ccgacgacgt caaacgccga ttggctgcca atgtcgacca agccgaacgg gcgtacaccg
     4741 acgccgcagc cgacggcctt gccgatggat tacccggcat cgacgacgag gtgcgcagcc
     4801 tcgcccaggc gaacgagagg tcgcgaattg cgcttcatga cggcaggccc attgctgttg
     4861 tgcttgccga tctcgagcaa ggcacggcgc atgctttcgc ggtgctgaag gcggccctct
     4921 cttcacggct ctagcctgca agctgccgat gcgagctcgc tatgtcgaaa acacgatgca
     4981 ggccgggctg ccgacccgga cgcgcaggcg cgtcggcgcc agacggccgc cacggccaac
     5041 ccggtagccg acgatcgacc ggctgtcctg gttggcgacg tagagaaagc gttgcgccgg
     5101 gtcgacggcg aagaagcgcg gcgtgcggcc cagcgtcggc acccactggc gcggcgaaag
     5161 cgtgcccctg gcgggatcga tggcgaatac gccgatgctg tcgtggccgc ggttggagac
     5221 atagacgttg cgcccgccgc gatcgaccca gatctcggcg ccggtgctgt agccggtgaa
     5281 gtcggatggc gtggagggga tcgtctgcag cggcgcgagc gcgccgctgg cgcggtcctg
     5341 gcgataggtc gtgacggtcg aatcgagctc gttgatcaca taggcgagcg ccttgcgcgg
     5401 atggaaatcg atgtgccgcg gcgcggcacc cggccggccc gcgacgcgcg ctgcctcgac
     5461 cagcacgccg cgcctggcat ccagccggta ggcgacgacg gcgtcggagc ccttgcaggg
     5521 cacgtagaag aagcggccct ggcgatcgag cgggatgtga tgcacgcaca tggtgcgctg
     5581 ctggaagcgg tgcgggccca gcgttccggt cacggtcgtg agggtgcggt agggcaacag
     5641 gctgccgtcg gcggcgatcg gcaggacggc aagggagtcc gacccgtagt tggcgatggc
     5701 gagaaagcgg ccggtcgcgt cgaaagcgag gtgcacggga ttgtagccgc cggtcggctg
     5761 gcggttcagc ggcgcgatat ggccggtctg ccgatcgatg gtgaaggaat tggcctcggt
     5821 gcgatcgcca tgcaccgaat agaggtgggt gcctgcccca ttgattgcca ggaacgacgg
     5881 gttctccagt ccgcccagac gctggacagg gctgaaggcg ccactgcgcc ggtcgacgcg
     5941 atagacattg ataccgttgc cctgtccatg ccgctcgggc gtggtgtagc tgccgacata
     6001 ggcgaagagg ggtcggcgtg cgcggctggt gttgttcatc ggcgaagaat gacgtcagcc
     6061 tgggctttcg acaatcatcc cgccaccacg ataccgagac cgggcttgcg gtcctccagc
     6121 cggatcgtga gcccgtgcag gccggcgatc gccttgacca gcgcgaggcc aaggccgctg
     6181 ccggcggtcg accggctctg gtccagtcga tagaagcggt cgaacacccg ctcatgctcg
     6241 gactccggaa taccggggcc attgtccgcc acctcgatct cgaagccggc gcccgccttg
     6301 cgcagcgcca gcgacacggt cgagccggcc tgcgtgtggt gcagcgcatt ctcgaccagg
     6361 ttggagatca tctgggccag cagctggcgg tcgccggtca gatggatgcc gtcctcgacc
     6421 ttgtacgtca gccgatgctc ggaatcctcg gccgccggct ggtaggcctc gccgacgctg
     6481 cgcaccagct cggagagatc gacgtcggtg aagccgcgct tctgcgcccc ggcctcgacc
     6541 tgggcgatgc gcagcagggc ggagaaggtt tccagcagcg cgtcggcctc ctcgatggcg
     6601 gcgtcggtcg cggcgtcgta gtcggcggtg gtggtcgccc gcgcgcgcgc gttctcgagg
     6661 tgctggcgca ggcggccgag cggcgtgcgc aggtcgtgag cgatatcgct cgagacctgg
     6721 cgcagcccgt ccatcaattg ctggatgcgg ctca
//
LOCUS       DASWGA010000557         3441 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_437954, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000557 DASWGA010000000
VERSION     DASWGA010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437954"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VF991_13225"
     CDS             <1..418
                     /locus_tag="VF991_13225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9557454.1"
                     /translation="IAARSAFVSTGYARVGLSGDYGIAWLLTRAVGSARARELMFTAE
                     RVDAERCERIGLVNRIVADDKLQEEAFALAKSLAEGPRVALRNMKDNLDDALHVDYPT
                     ALYREAERLVQASRTEDHKEAVRAFVEKRKPVFVGR"
     gene            complement(423..1412)
                     /locus_tag="VF991_13230"
     CDS             complement(423..1412)
                     /locus_tag="VF991_13230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013499994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEX9557455.1"
                     /translation="MNRQWLYAKQPQGKIAADTFQWSETAIPVPRDGEALVRTRMLSL
                     DPANRAWMMGKTYRDALEPGQVMSGFAIGEVVESKTGGLKSGDVVEGDWGWQDYAAMP
                     SRRLTKRTTQAPLELLIGPLSITGLTAYFGLLEVGQPKPGDTVLVSAAAGAVGTMVGQ
                     IAKLAGCRVVGTAGGQDKCDWLTRELGFDAAVDYKAGGVRRALAAVCPSGIDVYFDNT
                     GGPVLDAALSLMNLRGRIVCCGNVSQYDVEKPAPGPMAVPGLVVTKRLRMEGFIVMDF
                     YDRRAEAEARLARWVEDGRIKAIVDVVEGLDKAPEALIGLFEGRNRGKMAVRV"
     gene            complement(1417..2220)
                     /locus_tag="VF991_13235"
     CDS             complement(1417..2220)
                     /locus_tag="VF991_13235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HEX9557456.1"
                     /translation="MKDRVSIDLKDGVADVRLIRADKMNALDPAMFEGIIAAGAQLAE
                     MKGVRCVVLSGEGKAFCAGLDMASFAAMKQDGDAVPGVRDLTNRTHGIANRPQQCAWQ
                     WRELPVPVIAAVHGVAFGGGFQIALGADMRYATADTRFSVMEIKWGLVPDLAGTQLMR
                     HLAREDVVRELTYTGRIFNGTEGQQLGFVTRVVEDPRAAAFETAREIAGKSPDAMRAA
                     KRLLNLAVATDAKSGLLAESVEQQKLIGSPNQLEAILSNLQKRAASYKD"
     gene            complement(2217..2429)
                     /locus_tag="VF991_13240"
     CDS             complement(2217..2429)
                     /locus_tag="VF991_13240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557457.1"
                     /translation="MSDVKAEVRALLDRLPDDCTFADVQRGIAVLMWPHKSQGQGDGS
                     PKLPERLAPEEVKRRLREWLKSEKDK"
     gene            complement(2426..3181)
                     /locus_tag="VF991_13245"
     CDS             complement(2426..3181)
                     /locus_tag="VF991_13245"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEX9557458.1"
                     /translation="MFSLPVLAVLAVVAVVTSFISGIFGMAGGMLLIGFLLVLLPVPV
                     AMVFHGVIQIAANGWRAWLWRHHVKWSVGLQFGAGAVASLIVFSFFDFVPDKALVLMV
                     VGLTPFVTLAVPQRIAPDVERGGHAFLAGAIGGAMQLVAGITGPLLDIFYVRTGMTRQ
                     VNVATKAAAQVLGHLTKVVYFAVLVNSPAGRDLEQWLVMAYAACFAVLGTTLSRSFLD
                     RLSDRQFYYWTRRLILALGAVYVGQGIWLMVSR"
BASE COUNT          585 a         1169 c         1142 g          545 t
ORIGIN      
        1 catcgccgcc cgatcggctt tcgtcagcac cggctatgcg cgtgtcgggc tttccggcga
       61 ctacggcatt gcctggctct tgacccgcgc cgtgggctca gcgcgggcgc gcgagctgat
      121 gttcaccgcc gaacgggtcg acgccgagcg ctgcgagcgc atcgggctgg tcaacaggat
      181 cgtggccgac gacaaattgc aggaagaagc cttcgcgctg gccaagtcgc tggccgaggg
      241 cccgcgggtg gcgctgcgca acatgaagga caatctcgac gacgccctgc atgtcgacta
      301 tccgaccgcg ctctaccgcg aggccgaacg gctggtgcag gcctcgcgca ccgaggacca
      361 caaggaagcg gtgcgggcgt tcgtggagaa gagaaagccg gtgttcgtgg gacgttagtt
      421 cattacaccc gcaccgccat cttccctctg ttgcggccct cgaacagccc gatcagcgct
      481 tcgggcgcct tgtcgaggcc ctcgaccacg tcgacgatcg ccttgatcct gccgtcctcg
      541 acccagcgcg ccagccgcgc ttcggcttcg gcccggcggt cataaaaatc catgacgatg
      601 aagccttcca tgcgaagccg cttggtgacg accaggcccg gcaccgccat cggcccgggc
      661 gccggcttct cgacgtcgta ttgcgagacg ttgccgcagc agacgatgcg gccgcgcagg
      721 ttcatcagcg acagcgccgc gtcgagcacc ggcccaccgg tattgtcgaa atagacgtcg
      781 atgccgctgg ggcagaccgc ggccagcgcg cggcgcacgc cgcccgcctt gtagtcgacg
      841 gcggcatcga aaccgagttc gcgcgtcagc caatcgcact tgtcctggcc gcccgccgtg
      901 ccgaccacgc ggcagcccgc gagcttggcg atctggccga ccatggtgcc gaccgcgccg
      961 gccgccgcgg aaaccagcac cgtgtcgccg ggcttgggct ggccgacctc aagcaggccg
     1021 aaataggcgg tgagcccggt gatgctgagt ggcccgatca aaagctcgag cggcgcctgg
     1081 gtcgtgcgct tggtcaggcg ccgcgacggc atcgccgcat agtcctgcca gccccaatcg
     1141 ccttcgacga cgtcgccgga cttgagcccg ccggtcttgg actcgaccac ctcgccgatg
     1201 gcaaagccgc tcatcacctg gcccggctcc aaagcgtcgc gataggtctt gcccatcatc
     1261 caggcgcggt tggcggggtc gagcgacagc atgcgggtgc gcaccagcgc ctcgccgtcg
     1321 cgcggcacgg ggatcgccgt ctccgaccac tggaaggtgt cggcggcgat cttgccctgg
     1381 ggctgcttgg cgtagagcca ttggcggttc atggcgtcaa tccttgtagc tggcggcacg
     1441 cttctgcagg ttggacagga tcgcctcgag ttggttgggc gagccgatca gcttctgctg
     1501 ctcgaccgac tcggccaaaa ggcccgactt cgcgtcggtc gcgacggcga ggttgagcaa
     1561 ccgcttggcc gcacgcatgg cgtcgggact cttgccggcg atttccctgg ctgtctcgaa
     1621 cgcagcggcg cgagggtctt cgactacgcg ggtgacgaaa cccagctgct gcccctccgt
     1681 gccgttgaag atgcggccgg tgtaggtgag ctcgcgcacc acgtcctcgc gcgccagatg
     1741 gcgcatgagc tgcgtgccgg cgaggtcggg cacgaggccc cacttgatct ccatcaccga
     1801 aaagcgcgtg tcggccgtgg cgtagcgcat gtcggcgccc agcgcgatct ggaagccgcc
     1861 gccgaaagcc acgccatgca ccgcggcgat caccggcacg gggagctcgc gccattgcca
     1921 ggcgcattgc tgcggccggt tggcgatgcc gtgcgtgcgg ttggtgaggt cgcgcacgcc
     1981 cggcaccgcg tcgccgtcct gcttcatcgc cgcgaagctt gccatgtcga ggccggcgca
     2041 gaacgccttg ccctcgcccg acagcacgac gcaacgcacg cccttcatct cggccagttg
     2101 cgcgccggcg gcgatgatgc cctcgaacat cgccggatcg agcgcgttca tcttgtcggc
     2161 gcggatcagg cgcacgtcgg cgacgccgtc cttgaggtcg atcgaaaccc ggtccttcat
     2221 ttgtccttct ccgatttcag ccattcgcgc aggcggcgtt tcacttcttc cggcgccagg
     2281 cgttccggca gcttcgggct gccgtctcct tgcccttggg atttatgggg ccacatcagc
     2341 acggcaatac cacgctgcac atcggcaaac gtgcagtcgt cgggcagccg gtccagcaag
     2401 gcacgcactt ctgctttgac gtcgctcatc ggctcaccat cagccagata ccttgtccca
     2461 catagaccgc gcccagcgcc aggatcaggc ggcgcgtcca atagtagaac tgcctgtccg
     2521 acaggcggtc gaggaaactg cgtgacaagg tggtgccgag cacggcgaag caggcggcgt
     2581 aggccatgac cagccattgc tcgaggtcgc ggccggccgg actgttcacc aggacggcaa
     2641 agtagacgac tttggtgaga tggcccagca cctgggcggc cgccttggtg gcgacgttga
     2701 cctgccgggt catgccggtg cgcacgtaga agatgtcgag caatgggccg gtgatgccgg
     2761 ccaccagctg catggcgccg ccgatcgcgc ccgccaggaa ggcgtggccg ccacgctcga
     2821 cgtcgggcgc gatgcgctga ggtacggcca gcgtcacgaa gggcgtcagc cccaccacca
     2881 tcagcaccag cgccttgtcg ggcacgaaat cgaagaagga aaaaacgatc agcgaagcga
     2941 cagcgccggc gccgaactgc agccccacgc tccatttcac gtgatggcgc cacagccagg
     3001 cgcgccagcc gttggccgcg atctggatca cgccgtggaa caccatggcg accggcaccg
     3061 gcagcagcac cagcaaaaag ccgatcagca gcatgccgcc ggccatgccg aagatgccgg
     3121 agatgaacga ggtcacgacg gccacgaccg ccagcaccgc caggacggga agcgaaaaca
     3181 tcggtgcgcg gcgtagcgca gagggaggat gaacacaatt cctcccctcg ttcatacgag
     3241 gggaggtgtc cgcgcagcgg acggaggggt catgcgtcgt cgatgaaaga ccatgaccct
     3301 ccggcccttc gggccacctc ccctgctgcg caggggagga aattggtctc tgctatggtg
     3361 ggcgcatggg ggcgctgctc aagcgggcgc gaccgtgggc gcagcatcgg cccactggca
     3421 ttgatttagg catcaatcgg t
//
LOCUS       DASWGA010000558         1991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_824275, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000558 DASWGA010000000
VERSION     DASWGA010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_824275"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1201)
                     /locus_tag="VF991_13250"
     CDS             complement(<1..1201)
                     /locus_tag="VF991_13250"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9557459.1"
                     /translation="MKFTRRKAIIGGIVGGGLLGVGFWFARERDRLGSRTLFNVKANE
                     AGLSGWIKIARDNSVIVAVPRAEMGQGIQTALAMLAAEEMDARWNQVRVEDPPEDGVY
                     RNVEILIDALPFSPEEAGTVVDTVHWVAEKLGGVLGVLATGGSTATRDAWLPMRTAGA
                     VARDLLVRAASRKAGIPVADLIVSEGEVRRKDGSRVATFGELVDFVGDLSSMPPPPLK
                     KPSEFKLLGKPLPRLDIPAKVMGAATFGIDVRLPGLLYAAVLNAPTFGGSASGFNIKG
                     QLPKGVETVIIVPGGVAAIGSSWWRANKLLKEGVEVKWQPGPEPQLDSAGLWKRYEEL
                     LATAEPALTRTLGTENKPAIAQTVEAIYRAPYLAHTTMEPMNCTARAAKSAVEVWMPN
                     QSPTLMRL"
     gene            complement(1198..1659)
                     /locus_tag="VF991_13255"
     CDS             complement(1198..1659)
                     /locus_tag="VF991_13255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9557460.1"
                     /translation="MISFTVNGQARQVDVEADKPLLWVLREDLGIVGPKFGCGVASCG
                     ACTVHVDGVPVRSCSLPAGQVAAKTVVTIEGLSLGKLHAVQQAWIEQQVPQCGYCQPG
                     FIMATAALLAAKPKPSDGDIDEVLSNICRCGTYSAIRRAVHRAAAILSGPS"
     gene            complement(1656..>1991)
                     /locus_tag="VF991_13260"
     CDS             complement(1656..>1991)
                     /locus_tag="VF991_13260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9557461.1"
                     /translation="ILREAVPQWFETDDDVPFMMQVFRIRPEKRPEIPAVTHVDGTGR
                     LQTVTWAGNPRYARLIEAFRDITGVPIVLNTSFNENEPVVCRPEEAIDCFLRTKMDVL
                     VLGDTLIQR"
BASE COUNT          314 a          683 c          662 g          332 t
ORIGIN      
        1 cgagccgcat cagggtcggc gactggttgg gcatccagac ctcgacagcg gacttggcgg
       61 cccgggccgt acagttcatc ggctccatcg tcgtatgggc aagatagggc gcgcgataga
      121 tcgcttcgac ggtctgcgcg atcgcgggct tgttttcggt gccgagcgtg cgcgtcagcg
      181 ccggctcggc ggttgccagc agttcctcgt agcgcttcca caggccggcg ctgtcgagct
      241 ggggctcggg tcccggttgc catttcactt cgacgccttc cttcagaagc ttgttggcgc
      301 gccaccagct cgagccaatg gcggcaacgc cgcccggcac gatgatcacc gtctcgacgc
      361 ccttgggcag ctggcccttg atgttgaatc cgctggccga tccgccgaat gtcggcgcgt
      421 tcagcaccgc cgcatagagt agcccgggca ggcgcacatc gatgccgaag gtggccgcgc
      481 ccatcacctt ggccggaatg tcgagccgcg gcagcggctt gcccaaaagc ttgaactccg
      541 acggtttctt gagtggcggc ggcggcatgg aagagagatc gccgacgaaa tcgaccagtt
      601 cgccgaacgt ggcgacacgg ctgccatcct tcctgcggac ctcgccctcg ctcacgatca
      661 ggtcggcgac cggaatgccg gccttgcggc tggccgcgcg cactaaaagg tcgcgggcca
      721 ccgcgcctgc cgtgcgcatc ggcagccagg cgtcgcgcgt cgcggtcgaa ccgccggtcg
      781 ccagcacacc gagcacgccg cccagctttt ctgcgaccca atgcaccgta tcgacgaccg
      841 tgccggcctc ctccggcgag aacggcaggg cgtcgatcag gatctcgacg ttgcggtaga
      901 cgccgtcctc tggcggatcc tcgacgcgca cctgattcca gcgcgcgtcc atctcctcgg
      961 ccgccagcat ggcaagcgcg gtctggatgc cctgtcccat ctcggcgcgc ggcacggcca
     1021 cgatcaccga gttgtcgcgt gcgatcttga tccagccgct cagccccgcc tcattcgcct
     1081 tgacgttgaa cagcgtgcgg ctgcccagcc ggtcgcgttc gcgggcgaac cagaagccga
     1141 cgcctagcag gccgccaccg acgatgccgc cgatgatcgc cttgcgccgg gtgaacttca
     1201 cgacgggccg ctcaggatcg ccgccgcgcg atgcacggcg cggcggatgg cgctgtaggt
     1261 gccgcagcgg cagatgttgg acagcacctc gtcgatgtcg ccgtcgctcg gcttgggctt
     1321 ggccgcgagc agcgctgccg tcgccatgat gaagccgggc tggcagtagc cgcactgggg
     1381 gacctgctgt tcgatccacg cctgctgcac agcgtgcagc ttgccgaggc tcaacccctc
     1441 gatggtcacc acggtcttgg ctgcaacctg gccggccggc agcgagcacg agcgcaccgg
     1501 cacaccatcg acatggaccg tgcaggcgcc gcaggaggcc acgccgcagc cgaacttcgg
     1561 gccgacgatg ccgaggtcct cgcgcaggac ccagagcagc ggcttgtcgg cttcgacatc
     1621 gacctggcga gcctggccgt tgacggtgaa cgagatcatc gttggatgag cgtatcaccc
     1681 aggacgagga cgtccatctt ggtccgcagg aaacagtcga tggcttcctc gggtctgcaa
     1741 acaaccggct cgttttcgtt gaagctggtg ttgagcacga tgggcacgcc ggtgatgtcg
     1801 cggaaggcct cgatcaggcg cgcataacgc ggattgcccg cccaggtcac ggtctgcagg
     1861 cggccggtgc cgtcgacatg ggtcaccgcc gggatctccg gccgcttctc ggggcggatg
     1921 cggaagacct gcatcatgaa cggcacgtcg tcgtcggtct cgaaccactg cggcaccgcc
     1981 tcgcgcagga t
//
LOCUS       DASWGA010000559         1650 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2469239, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000559 DASWGA010000000
VERSION     DASWGA010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2469239"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1650
                     /locus_tag="VF991_13265"
     CDS             <1..>1650
                     /locus_tag="VF991_13265"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9557462.1"
                     /translation="RPPYPALTKDRVRWVGDYVAFVVAERYTQAMDAAELIAVDYELL
                     PAIVSTAQASASGAPRVWDGCADNIGFVQLFGDKAATEAAFAKADHVVKHRLVINRVT
                     AASMEPRGALGDYNATDGRYTIYATLQRVHPYRSELAPILKVPESKIRVVAGDIGGSF
                     GMKSAVYNEVALVLLASKTVGRPVKWTSTRSEAFLSDAQARDNVTEAELALDKQGNFL
                     GMRVKTIASIGAYLQTGMPAFTGNIGTLAGVYRTPAMHADVTAVFTHTNPVRPYRGNG
                     RPEAAYVIERLVDLAADELGIDPAELRRRNYIAPAAMPFKTALTFTYDSGEFEKSMDI
                     ALELADVAGFEKRRAQSRKHGKLRGIGLSNTIERAAAAGFEGAEIRFDKSGTVTLFAG
                     SVTQGQGHETIFKQIMCDRLGLDPNDVHYVQGDTDQVFIGEGTGGSRSATIGGAAVDM
                     AADKITAKAKLIAAHALKVDTTDINFADGVFSSPKTNRTLTIKEVAKEAMEPAKLPKG
                     MDVGLIATATYVAPVQNFPNGCHICELEIDQDTGTVEIVRY"
BASE COUNT          303 a          566 c          535 g          246 t
ORIGIN      
        1 tccggccgcc ctacccggcg ctcaccaagg atcgcgtgcg ctgggtcggc gactacgtcg
       61 ccttcgtggt ggcggaacgc tacacccaag ccatggacgc ggccgagctg atcgcggtcg
      121 actacgagct gctgcccgcg atcgtctcga cggcgcaggc tagtgcatca ggcgcgccgc
      181 gggtgtggga cggctgcgca gacaatatcg gcttcgtgca gctgttcggc gacaaggccg
      241 cgaccgaggc cgcgttcgcc aaggccgacc acgtggtcaa gcatcgcttg gtgatcaacc
      301 gcgtgaccgc cgccagcatg gagccgcgcg gcgcgctggg cgactacaac gcgaccgatg
      361 gccgctacac catctacgcc acgctgcagc gcgtgcatcc ttaccgttcg gagctggcgc
      421 cgatcctcaa ggtcccggag agcaagatcc gcgtggtcgc cggcgacatc ggcggcagct
      481 tcgggatgaa gtcggcggtc tacaacgaag tggcgctggt gctgctggcg tcgaaaaccg
      541 tgggccgccc ggtgaaatgg acctccactc gctcggaggc ctttctcagc gatgcccagg
      601 cccgcgacaa cgtcaccgag gccgaactcg cgctcgacaa gcagggcaat tttctcggca
      661 tgcgcgtgaa gaccatcgcc agcatcggtg cctatttgca gaccggcatg ccggccttca
      721 ccggcaatat cggcacgctc gccggcgtct atcgcacccc cgccatgcac gccgacgtca
      781 ccgccgtgtt cacgcacacc aatccggtgc gaccttatcg cggcaacggc cgtcccgagg
      841 cggcttatgt gatcgagcgg ctggtcgacc tcgccgccga tgaattgggg atcgatccgg
      901 cggagctgcg gcggcgcaac tacattgcgc ccgcggccat gccgttcaag accgcgctca
      961 ccttcaccta cgacagcggc gagttcgaga agagcatgga catcgcgctc gagctcgccg
     1021 acgtcgccgg cttcgagaag cggcgcgcgc aatcgcgcaa gcacggcaag ctgcgcggca
     1081 tcggcctctc caataccatc gagcgggcgg cggcggccgg cttcgagggc gccgagatcc
     1141 ggttcgacaa atccggcacg gtcacgctct tcgccggcag cgtcacccag ggccagggcc
     1201 acgagaccat cttcaagcag atcatgtgcg accgcctcgg cctcgatccc aacgacgtgc
     1261 actacgtgca gggcgacacc gaccaggtct ttatcggcga aggcaccggc ggctcgcgct
     1321 cggcgaccat cggcggcgcg gcggtcgaca tggccgcgga caagatcacg gccaaggcca
     1381 agctgatcgc ggcccatgcg ctcaaggtcg atacgacgga catcaatttt gccgacggcg
     1441 tgttctccag cccgaagacc aatcgcacct tgaccatcaa ggaggtggcg aaggaggcga
     1501 tggagccggc gaagctgccg aagggcatgg acgtcggcct gatcgcgacc gcaacttacg
     1561 tggcgccggt gcagaacttc cccaacggct gccacatctg cgagctggag atcgaccagg
     1621 acaccgggac cgtcgagatt gtgcgctaca
//
LOCUS       DASWGA010000560         4569 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2204555, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000560 DASWGA010000000
VERSION     DASWGA010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4569
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2204555"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..606)
                     /locus_tag="VF991_13270"
     CDS             complement(79..606)
                     /locus_tag="VF991_13270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX9557463.1"
                     /translation="MVKTILLLRHAKSAWSDPRLDDHERPLSRRGERAAKAMAGHIVR
                     REPRPDLILCSTAMRTRQTLAPLVKRLDAPAPPITLERGLYLASEDILLAHLQAVPDD
                     AATVLLIAHNDGVWRLAEALAESGPAELLTALQQKYPTGALATFRAADRPWHDLAPGS
                     AKLVAFVRPRDLAVS"
     gene            704..2854
                     /locus_tag="VF991_13275"
     CDS             704..2854
                     /locus_tag="VF991_13275"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HEX9557464.1"
                     /translation="MPPRPASSLEIAPDSPRRFINRELSWLAFNMRVLEEASNKRHPL
                     LERVRFLSISADNLDEFYMVRVAGLVDMLQTRSTLLSDDGMTPAEQLAAIRERASILM
                     AHQQEVWATLQGELREAGIAVLDPGELTEAERAWLDQYFIDQVFPILTPLAIDPAHPF
                     PFIPNGGFSAILKLQRRNDRRPLMALLPMPPQVDRFVRLPGAAIRFLSLEDLVDIYLP
                     RLFPGYEVIEQAVFRLIRDSDVEINEEAEDLVLLYESALKRRRRGDLISISVNSAIPA
                     ELRDFLFDQLEVPAQTQNIHVFHLDRMLNIGDVKAVIVDSRPDLKFAPYNARFPERIR
                     DFGGDCFAAIRAKDIVVHHPYESFDVVVQFLRQAALDPAVVAIKQTLYRTSADSPIVR
                     ELITAAEAGKTVTALVELKARFDEEANIRWARDLERAGVQVVYGFIDLKTHAKVSMVV
                     RREAQSIRTYVHFGTGNYHPITARIYTDLSFFTCDPAMGRDAARLFNYMTGYARPEQM
                     EKIAFAPVTLRPTLYSLIDAEIANAEAGRPAAIWAKLNSLVDAPLIDRLYAASRAGVQ
                     IDLVVRGICCLRPGMPGLSEHIRVKSMIGRFLEHARIVCFGNGKPLSSPEAKVFISSA
                     DWMPRNLDRRVELLCPVENPTVHEQVLDQIMVANLKDDGQSWIMAPDGSYSRPHLGKE
                     PFIAHHYFMTNPSLSGRGSALKLSGAVPRLVLRS"
     gene            2964..4469
                     /locus_tag="VF991_13280"
     CDS             2964..4469
                     /locus_tag="VF991_13280"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEX9557465.1"
                     /translation="MDGETTVDARASDKAAAKGRVGIIDVGSNSIRLVVYERASRAPL
                     PVFNEKVLCGLARGLDATGRLNPDGVEMALANIDRFTTLARNMKVTSLDLLATAAVRD
                     AADGADFMRELERRPGIKAHIVSGQDEARFSGYGVICGMPDASGVMGDLGGGSLELMA
                     LGEGKLGASSTLPVGPLRLMSSGKSDPRKVVLDAIEGVRWLREETGKTFYAVGGAWRS
                     FARLHMEQAGYPLHIIHHYEIAAEEARAVARLVAVQSAKSMEKMPGVSRRRIDTLPLA
                     CLALDRLLAALRPKTVVFSAFGLREGFYYSRLSEAERARHPLIAFAEEQGADWRRFDL
                     APSEIFDWLSQVFAGESDADRVLRIAACHLSDISWNDHPDYRAEQAYVRVLHLPAPGM
                     SHRERAILAMTLAYRYKSDPKSAMLDTAIKLSDSKGRTFARRLGACLRLAYNLSGGAP
                     GLLPQIELRRADRELRLIVPAGAKGSLGDVTARRLESAAEAFDLKPTIVTG"
BASE COUNT          716 a         1598 c         1508 g          747 t
ORIGIN      
        1 gttcctgtgc agcacgcacg caagctacat caccgggcag aacctgctga tggacggcgg
       61 ccagtatccg ggcacgtact aggatacggc gaggtcgcgc gggcgcacga acgcgaccag
      121 cttggccgag ccgggcgcga gatcgtgcca cggccggtca gctgcccgga aggtggcgag
      181 cgcgccggtc ggatatttct gctgaagggc cgtcaggagc tcggcgggac cgctttccgc
      241 cagcgcctcg gccaggcgcc agacgccgtc attgtgggcg atcagcagga ccgtggccgc
      301 gtcgtcaggc acggcctgga ggtgggccag caggatatcc tctgaggcga ggtagaggcc
      361 cctttccagg gtgatcggcg gggcgggggc gtccagccgc ttgaccagcg gcgccagcgt
      421 ctggcgggtc cgcatggccg ttgagcagag gatcaggtcg gggcgaggct cgcgacgcac
      481 gatatggccg gccatggcct tggccgcccg ctcgccgcgg cggctcaggg ggcgttcatg
      541 gtcgtccagc cggggatcgc tccaggctga tttcgcatgc cgcaggagaa ggatggtctt
      601 caccacgccg atccagacaa aatcctttta gaacaaacgt ttattgaatt gccatgacac
      661 cgtcatgcgg aggcgttacc gtttggcaat ggacgccgtt tccttgcccc ccaggccggc
      721 ctcgagcctc gaaatagcac ccgacagtcc gcgccgcttc atcaatcgtg aattgtcgtg
      781 gctggccttc aatatgcggg tccttgagga agccagcaat aagcgccatc cgctgctcga
      841 gcgggtgcgc ttcctgtcga tctccgccga caatctcgac gaattttaca tggtccgcgt
      901 ggccggcctg gtcgacatgc tgcagacccg ctcgaccctg ctcagcgacg acggcatgac
      961 gccggccgag cagctcgcgg cgatccgcga gcgggcctcg atcctgatgg cccaccagca
     1021 ggaagtgtgg gccaccctgc agggcgagct gcgcgaggca ggcatcgccg tgctcgaccc
     1081 cggcgagctc accgaggccg agcgggcgtg gctcgaccag tatttcatcg accaggtctt
     1141 cccgatcctg acaccgctcg ccatcgatcc ggcgcatcct ttcccgttca ttcccaacgg
     1201 cggcttttcg gcgatcctga agctgcagcg gcgcaacgac cggcggccgc tgatggcgct
     1261 gctgccgatg ccgccgcagg tcgaccgttt cgtgcgcctg cccggcgcgg cgatccgctt
     1321 cctgtcgctc gaggaccttg tcgacatcta cctgccgcgc ctgttcccgg gctacgaggt
     1381 gatcgagcag gccgtgttcc gcctgatccg cgacagcgac gtcgagatca acgaggaggc
     1441 cgaggatctc gtgctgctct acgagagcgc gctcaagcgc cgccgccgcg gcgatctgat
     1501 ctcgatctcg gtcaacagcg ccatcccggc cgagctgcgc gacttcctgt tcgaccagct
     1561 cgaagtgccg gcgcagaccc agaacattca cgtcttccat ctcgaccgca tgctcaatat
     1621 cggcgacgtg aaggcggtga tcgtcgacag ccggcccgac ctcaagttcg cgccctacaa
     1681 tgcccgcttc cccgaacgca tccgcgactt cggcggcgac tgcttcgccg ccatccgcgc
     1741 caaggacatc gtcgtccatc atccctacga gagtttcgac gtcgtcgtgc agttcctgcg
     1801 ccaggcggcg ctcgatcccg ccgtggtggc gatcaagcag acgctgtacc gcacctcggc
     1861 cgattcgccg atcgtccgcg agctgatcac ggccgccgag gccggcaaga cggtgacggc
     1921 gctggtcgag ctcaaggcgc gcttcgacga ggaggccaac atccgctggg cgcgcgacct
     1981 cgagcgcgcc ggcgtgcagg tggtctacgg cttcatcgac ctgaagaccc acgccaaggt
     2041 ctcgatggtg gtgcggcgcg aggcgcagtc catccggacc tacgtgcatt tcggcaccgg
     2101 caactaccat ccgatcacgg cccgcatcta caccgacctg tcgttcttca cctgcgatcc
     2161 ggcgatgggc cgcgacgccg cacgcctgtt caactacatg acgggttatg cacggcccga
     2221 gcagatggag aagatcgcct tcgcgcccgt caccttgcgg ccgacgctct acagcctgat
     2281 cgatgcggag atcgccaatg ccgaggccgg ccggccggcc gcgatctggg ccaagctcaa
     2341 ctcgctggtc gacgccccgt tgatcgaccg gctctatgcc gcctcgcggg ccggcgtgca
     2401 gatcgacctg gtggtgcgcg gcatctgctg cctgcggccc ggcatgccgg gcctcagcga
     2461 gcacatccgg gtcaagagca tgatcggccg cttcctcgag catgcccgca tcgtctgctt
     2521 cggcaatggc aagccgctgt cctcgcccga ggccaaggtc ttcatctcgt cggccgactg
     2581 gatgccgcgc aacctcgacc ggcgggtcga gctgctctgc ccggtcgaga atccgacggt
     2641 ccacgagcag gtgctcgatc agatcatggt cgccaacctc aaggacgatg gccagagctg
     2701 gatcatggcg cccgacggtt cctacagccg cccgcatctg ggcaaggaac ctttcatcgc
     2761 ccatcactat ttcatgacca acccgtccct gtccggccgc ggcagcgcgc tcaagctgag
     2821 cggcgcggtt cccaggctgg tgctccgctc ctgaggcggg ctttccgggt gccggcagcg
     2881 gacgtctcgg cgccgtccgc ggcgcctagt cgcgcccgaa tcgccgctgc aatcctgcac
     2941 ggtttcggct agaggaagcg cgcatggacg gcgaaacgac cgtagacgcc cgagcttcgg
     3001 acaaagccgc cgcgaagggc cgcgtcggca tcatcgacgt cggctccaac tcgatccgtc
     3061 tcgtcgtcta cgagcgggcg agccgtgcgc cgctgccggt gttcaacgaa aaggtgctgt
     3121 gcgggctggc gcgcgggctc gacgccaccg gccggctcaa tcccgacggc gtcgagatgg
     3181 cgctggccaa catcgatcgc ttcacgacgc tcgcccgcaa catgaaggtg acgtcgctcg
     3241 acctgctggc gacggccgcg gtgcgcgacg ccgccgacgg cgccgatttc atgcgcgagc
     3301 tcgagcggcg gcccggcatc aaggcccaca tcgtgagcgg ccaggacgag gcgcgcttct
     3361 cgggctatgg cgtgatctgc ggcatgcccg acgcctcggg cgtgatgggc gacctgggcg
     3421 gcggcagcct cgagctgatg gcgctgggcg agggcaagct cggcgcctcc agcaccctgc
     3481 cggtcgggcc gctcaggctg atgtcgtcgg gcaagagcga tcccaggaag gtcgtgctcg
     3541 acgccatcga aggcgtgcgc tggctgcgcg aggagaccgg caagaccttc tatgccgtgg
     3601 gcggcgcctg gcgctccttc gcgcgcctgc acatggagca ggcgggttat ccgctgcaca
     3661 tcatccacca ctacgagatc gccgccgaag aggcgcgcgc cgtggcccgg ctggttgccg
     3721 tgcagagcgc caagtcgatg gaaaagatgc cgggcgtgtc gcgccgccgc atcgacacct
     3781 tgccgctcgc ctgcctggcg ctcgaccggc tgctggcggc gctcaggccc aagaccgtgg
     3841 tgttctccgc cttcggcctg cgcgagggct tctactattc gcggctcagc gaggccgagc
     3901 gcgcccgcca tccgctgatc gccttcgccg aggagcaggg cgccgattgg cgccgcttcg
     3961 acctcgcgcc gtccgagatc ttcgactggc tgagtcaggt cttcgccggc gagagcgatg
     4021 ccgatcgcgt gctgcgcatc gccgcctgcc acctgagcga catctcgtgg aacgaccatc
     4081 ccgactatcg cgccgagcag gcctacgtcc gggtgctgca cctgccggcg cctggcatga
     4141 gccatcgcga gcgggcgatc ctggcgatga cgctggccta tcgctacaag agcgacccca
     4201 agtcggcgat gctcgacacc gcgatcaagc tgtccgacag caaggggcgc acgttcgccc
     4261 gccgcctcgg cgcctgtctc aggctggcct acaatctttc cggcggcgcg cccggcctgt
     4321 tgccgcagat cgagctgagg cgcgccgatc gcgagctgcg cctgatcgtg cccgccggcg
     4381 ccaagggcag cctgggcgac gtcaccgccc gccgcctcga aagcgccgcc gaggcgttcg
     4441 acctcaagcc gacgatcgtg acgggttagg ctcattgtct tccggaccgc gcgcgtcccg
     4501 cgcgctcatg atcatgtcag cgcattcata tgcgcgggcg cgcgggacgc gcgcggtccg
     4561 gaagagcta
//
LOCUS       DASWGA010000561         3688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_579216, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000561 DASWGA010000000
VERSION     DASWGA010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3688
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_579216"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..448
                     /locus_tag="VF991_13285"
     CDS             <1..448
                     /locus_tag="VF991_13285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007696108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HEX9557466.1"
                     /translation="GGAPGPVLDMLDEIGEASRAEVWFDDAFAKGTTLMGFGHRIYKV
                     RDPRADVLKRTVATLPATAGRLAYAAAVEQGAIAALRKHKPGRRLDTNVEYYTALLLE
                     ALEVPRSAFTALFAVGRTAGWCAHVFEQEKGGRIIRPQSNYVGPRP"
     gene            complement(445..966)
                     /locus_tag="VF991_13290"
     CDS             complement(445..966)
                     /locus_tag="VF991_13290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557467.1"
                     /translation="MTLCLSTGAQGQSGLWPEWLGGYAGAIRFYSSIPLEDIYPPPAH
                     PHVDLDDTAPFAVYFSIRAEDGGGVVWLRIDGGPMQTANAGETLRFGPPIDGVAGLIG
                     AQARPTPRSATLTVRPDSLGTEALFSHADGSFWRRHFNVRFTPTGADVIVWVFDAAGT
                     RARAWRGAAVRRD"
     gene            complement(996..1577)
                     /locus_tag="VF991_13295"
     CDS             complement(996..1577)
                     /locus_tag="VF991_13295"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX9557468.1"
                     /translation="MRYWPLLAGLMVCGPALAGPQDAWTIDPSKSSLSFSVAQVGAIV
                     SGRFPAWTGEIVLDPAALAAARIDIRIAMPPVTTNNRDVDSLMKGPNFLDVLKFPEAR
                     FVASSVVARGGERYEAQGKLTIRDVTRDAVLPFTLTIADDPARPGRLSATARGRLILK
                     RLDFGVGQNEWAGTGQVANEVTVDLSVVAGRGK"
     gene            complement(1577..2116)
                     /locus_tag="VF991_13300"
     CDS             complement(1577..2116)
                     /locus_tag="VF991_13300"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEX9557469.1"
                     /translation="MAEPTYHPAAQILHWLTALAVLGLLGLGLWMTDLPLGFTKLYAY
                     AWHKWIGLSVLLLTIGRLLWRWRHPPPPLPAAIVRWQAKLAPIAHWALLALLLAMPVS
                     GWLMSSAAGVSVVWFGYLPLPDLVPRDPNLFEALRTTHYVLSRLLIAVLALHIAAVVH
                     HDLLRRDGVFRRMWPFGRV"
     gene            complement(2126..3022)
                     /locus_tag="VF991_13305"
     CDS             complement(2126..3022)
                     /locus_tag="VF991_13305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX9557470.1"
                     /translation="MLTDKQIEAYRRDGYLVIPRLIEGEQLAELRALTDRIVVEARGV
                     AASDDLYDLEPSHSASLPRVRRLKPAIFKRYAFFQALTRDAKITSILAQLLGPNIRLY
                     GGKLNMKSAGYGSPVEWHQDWAFYPHTNDDVLATGLYLDDCDSDNGPLMVLPGTHLGP
                     TYDHHAAGRFCGAMNPADCALDFAKSVPLMGPAGSMTIHHARLVHGSALNRSNRQRRL
                     LLHEYTAADAWPLLGVASFDEFNSRMVLGEPTIEPRVVSAPVRLPLPPADHQGSIYEN
                     QRAVGRRFFETHEDRARAEAGR"
     gene            3067..>3688
                     /locus_tag="VF991_13310"
     CDS             3067..>3688
                     /locus_tag="VF991_13310"
                     /inference="COORDINATES: protein motif:HMM:TIGR02466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02466 family protein"
                     /protein_id="HEX9557471.1"
                     /translation="MAIRALFPTLISKQPLTGPDQRRLDQALADECRSLAASDAAGRR
                     WSARHYLGGYTSYGSLDRLHLVSSLFARLRRRIDPQVRAFAGALHYDLAGRTLAMTDC
                     WANVMSAGVAHSLHLHPTSFISGTYYLVVPKGAGALKFEDPRLSRHMATPPRRADAPE
                     SFRPFVSLPAQAGDLVLFESWLRHEVPPARFSGERISISFNYAWSAK"
BASE COUNT          601 a         1229 c         1302 g          556 t
ORIGIN      
        1 tggcggcgcg cccggccccg tgctcgacat gctggacgag atcggcgagg cctcgcgcgc
       61 cgaggtctgg ttcgacgatg ccttcgccaa gggcacgacc ctgatgggct tcggccatcg
      121 catctacaag gtgcgcgatc cgcgggccga cgtgctgaag cgcaccgtgg cgacgctgcc
      181 cgcgacggcg ggccgtctcg cctatgccgc ggcggtcgag cagggcgcca tcgccgcctt
      241 gcgcaagcac aagcccggcc ggcggctcga caccaatgtc gagtactaca ccgcgctgct
      301 cttggaggcg ctcgaggtgc cgcgtagcgc cttcaccgcc ctgttcgcgg tcggccgcac
      361 cgccggctgg tgcgcccatg tcttcgagca ggagaaaggc ggccgcatca tccgcccgca
      421 gtcgaattac gtcggcccgc ggccctagtc gcggcgcact gccgcgccgc gccaggcgcg
      481 ggcgcgcgtg ccggcggcgt cgaataccca gacgatcacg tcggcgccgg tcggcgtgaa
      541 gcggacattg aaatggcggc gccagaagct gccgtcggcg tggctgaaca gcgcctcggt
      601 gccgagcgaa tcgggccgaa cggtcagggt cgccgagcgc ggtgtcgggc gggcctgcgc
      661 gccgatcagc ccggccactc cgtcgatcgg cgggccaaac cgcagcgtct cgccggcgtt
      721 ggcggtctgc atcggcccgc cgtcgatgcg cagccagacg acgccgccgc catcctcggc
      781 gcggatcgag aaatagaccg cgaacggcgc ggtgtcgtcg agatcgacat ggggatgggc
      841 cggcggcgga tagatgtcct cgaggggaat cgagctgtag aagcggatgg cgccggcata
      901 accgccgagc cattccggcc acaagcccga ttggccctgc gcgccggtcg acaagcaaag
      961 cgtcatgcca gcgccgagga acaggcgccg ctgcatcatt tgccgcggcc cgccaccaca
     1021 ctgagatcga ccgtgacctc gttggcgacc tggccggtgc cggcccattc gttctggccg
     1081 acgccgaagt cgaggcgctt caggatcagc cggccgcgcg ccgtggcgct gagccggccg
     1141 ggccgcgccg gatcgtcggc gatggtgagc gtgaagggca ggacggcgtc ccgcgtgacg
     1201 tcgcggatcg tgagcttgcc ctgggcttca tagcgctcgc cgcccctggc gacgaccgag
     1261 ctcgccacga agcgcgcctc ggggaatttc agcacatcga ggaagttggg tcccttcatc
     1321 agcgaatcga cgtcgcgatt gttggtcgtg accggcggca tcgcgatcct gatgtcgatg
     1381 cgcgcggcgg cgagtgcggc gggatcgagc acgatctcgc ccgtccaggc cggaaagcgg
     1441 ccgctgacga tggcgccgac ttgggcaacg ctgaagctga gcgagctttt gctaggatcg
     1501 atcgtccagg cgtcctgcgg cccggcgagc gcgggtccgc aaaccatcag accggcgaga
     1561 agcggccagt agcgcatcag actctcccga acggccacat gcggcgaaag acgccgtcgc
     1621 gccgcaacag atcgtggtgc acgacggcgg cgatgtgcag cgccagcacc gcgatcaata
     1681 gccgcgacag aacataatgc gtggttcgca gggcttcgaa caggtttggg tcgcgcggca
     1741 ccagatcggg cagggggaga tagccgaacc agacgacgct gacgccggcc gccgagctca
     1801 tcagccagcc gctgaccggc atggcgagca acagggcgag caaggcccaa tgggcgatcg
     1861 gggcgagctt cgcctgccag cgtacgatgg ccgcgggcag tggcggcggc ggatggcgcc
     1921 agcgccacag caggcggccg atcgtgagca gcagcacgct gaggccgatc catttgtgcc
     1981 aagcataggc atagagcttg gtgaagccga gcggcaggtc ggtcatccac aggccgagac
     2041 cgagcaggcc gagcacggcg agcgccgtca gccagtggag gatctgggca gcgggatgat
     2101 aagtcggctc ggccacgcgt cccgctcagc gcccggcttc ggcgcgagcg cggtcctcgt
     2161 gcgtctcgaa gaaccgccgg cccacggcgc gctggttctc gtagatcgac ccctggtggt
     2221 cggcaggcgg cagcggcagg cgcaccggag cggagaccac ccgcggctcg atcgtgggtt
     2281 cgcccaacac catgcggctg ttgaattcat cgaagctcgc cacgccaagc agcggccagg
     2341 cgtcggcggc ggtgtattcg tgcagcagca ggcggcgctg gcggttggag cggttcagcg
     2401 ccgagccatg gactagccgc gcgtgatgga tggtcatcga gccggccggc cccatcaacg
     2461 gcactgattt ggcgaaatcg agggcgcagt cagccgggtt catggcaccg cagaagcggc
     2521 cggcggcatg gtggtcgtag gtcgggccga gatgcgtgcc cggcagcacc atcagcgggc
     2581 cgttgtcgct gtcgcagtcg tcgagataga ggccggtcgc cagcacgtcg tcgttggtgt
     2641 gtggatagaa cgcccagtcc tgatgccatt cgaccggcga gccgtaaccc gccgacttca
     2701 tgttgagctt gccgccatag aggcggatgt tgggtccgag gagctgcgcc aggatcgagg
     2761 tgatcttggc atcgcgcgtc agcgcctgga agaaggcgta gcgcttgaag atggcgggtt
     2821 tcagccggcg cacccgcggc aggctggcgc tgtggctggg ctcgaggtcg tagagatcgt
     2881 cgctggcggc aacgccacgc gcctcgacga cgatgcggtc ggtgagcgcg cgcagctcgg
     2941 cgagctgctc gccctcgatc aggcgcggaa tcaccagata gccgtcgcgc cgataggcct
     3001 cgatctgctt gtcggtcagc atgcgaaacc atagcacgac agcgcggctt caccgataat
     3061 cacgctatgg cgatccgcgc cctatttccg acactgataa gcaaacagcc gctcaccgga
     3121 ccggaccagc gccggctcga ccaggcgctg gccgacgaat gccgttcgct ggccgcctcc
     3181 gatgcggcag gacggcgctg gtcggcacgg cactatctcg gcggctatac ctcctatggc
     3241 tcgctcgatc gcctgcatct cgtgtcctcg ctgtttgccc gcctgcggcg gcgcatcgat
     3301 ccacaggtca gggcctttgc cggcgcgctg cactacgatc tcgctggccg aacccttgcc
     3361 atgaccgact gctgggccaa cgtcatgtca gcgggcgttg cgcattccct gcaccttcat
     3421 ccgacgtcgt tcatcagcgg cacttactac ctggtggtgc cgaaaggcgc cggcgccttg
     3481 aagttcgagg acccgcggct gtcgcgccac atggcgacgc cgccgcgacg cgccgatgcg
     3541 cctgaaagct tccggccgtt cgtcagcctg ccggcccagg cgggcgatct cgtgctgttc
     3601 gagagctggt tgcgccacga agtgccgccg gcgcgcttct ccggagagcg tatctcgatt
     3661 agcttcaact acgcctggtc cgccaagg
//
LOCUS       DASWGA010000562         2456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1324293, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000562 DASWGA010000000
VERSION     DASWGA010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1324293"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1590
                     /locus_tag="VF991_13315"
     CDS             <1..1590
                     /locus_tag="VF991_13315"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX9557472.1"
                     /translation="ARATATVDNRPVDEAAALDAIETHPETEQLTFALTVDTGPRFKV
                     EGIAIRGAGAASLPAIDMSKLGLAAGDPADAPAILAAQDLVLAEFRKQGYALASVRRE
                     VVVDHATRSAEVTFLVTTGPVARMGPVRFSGTEKVSTTYLQRRVPFKEGELYDPAKVE
                     TLRGKLTSLGVFNVVRIKPATALDANGELPIDVELTDRLPRSVGFGISYETQLGFAVS
                     AFWTHRNLFGEAESLRLTAEINHIGQGQLITDTGFTFRADFRKPDWWLPGQDGRATAE
                     ALREVLPAYNRNAVVLFGGIDRIISPIWQVRIGLTGEASQVKPTSSGIWTSYRLLGVP
                     MSLLMNKANSDTDPTQGYRLQLDVTPYVDVGPNNDFFSMLRLTGRSYFDLGEPGRSVL
                     ALRASFGTEPTGNIGGIPPDKLFYAGGGGSVRGFVYQSAGPRDAFNNPLGGASVVEAN
                     VEFRQRFGKSFGAVAFVDAGSAYPGTLPDFSLFAPRVGAGAGLRYYTDFGPVRLDVGF
                     PINRRDGDPPFGIYVSLGQAF"
     gene            1590..>2456
                     /locus_tag="VF991_13320"
     CDS             1590..>2456
                     /locus_tag="VF991_13320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557473.1"
                     /translation="MRAFRILAMVGGGVVALLALLVVFLQTPPGQRTLAALVSGKSLQ
                     VSGLGGFFPTDVSVAKVELLDEQGPWLHVENARLRWSFTSLFEGRVRVEALSASLVDV
                     LRPAVPDKTEQAAKTSDSFALPVGVDVQALSIDTLHLATAVAEIESRWAVHGNGLLSA
                     DLHEGRLRLSGDRSDGPSGKLSADIRFDLAQRTVDGEIALEEGTDGVAAGLLQRPDLD
                     RISMRLVAKGDAASGSGDLTLSAGDAATATGTARWQPNGAATAVSVRLEAAGARLAEH
                     GGPVSLSAEATLD"
BASE COUNT          359 a          885 c          797 g          415 t
ORIGIN      
        1 gcccgggcca ccgccaccgt cgacaaccgg ccggtcgacg aggccgccgc gctcgacgcc
       61 atcgagacgc atcccgagac cgaacagctg acgttcgccc tcaccgtcga caccggcccg
      121 cgcttcaagg tcgagggcat cgccatccgc ggcgccggcg ccgcctcgct gccggcgatc
      181 gacatgagca agctcggttt ggctgccggc gatccggccg atgcgcccgc catcctggcc
      241 gcccaggacc tcgttctcgc cgagttccgc aagcagggct atgcgctcgc ctcggtgcgg
      301 cgtgaggtcg tggtcgatca tgccacgcgc tcagccgagg tcacctttct cgtcacgact
      361 ggacctgtcg cccgaatggg tccggtgcgc ttctcgggaa ccgaaaaggt cagcacgacc
      421 tacctgcagc gtcgcgttcc cttcaaggag ggcgagcttt acgaccccgc caaggtcgag
      481 acgctgcgcg gcaagctcac atccctcggc gtattcaatg tcgtgcgcat caagccggcg
      541 acggcgctcg acgccaacgg cgagctgccg atcgacgtcg agctcaccga ccgtctgccg
      601 cgctcggtgg gcttcggcat cagctacgag acccagctcg gcttcgccgt cagcgcgttc
      661 tggacgcatc gcaacctgtt cggcgaggcc gagagcctgc ggctcaccgc cgagatcaac
      721 catatcggcc agggccagct gatcaccgac acgggcttca cctttcgcgc cgatttccgc
      781 aagcccgact ggtggctgcc cggccaggac gggcgcgcca ccgccgaagc cttgcgcgaa
      841 gtgctgcccg cctataaccg caacgccgtc gtgctgttcg gcggcatcga ccgcatcatc
      901 tcgccgatct ggcaggtacg catcgggctc accggggaag cttctcaggt caagccgacc
      961 agcagcggca tctggacgag ctatcggctg ctcggcgtgc cgatgtcgct gctgatgaac
     1021 aaggccaaca gcgataccga tccgactcag ggctaccgcc tgcagctcga cgtcacgccc
     1081 tatgtcgatg tcggccccaa caacgatttc ttttccatgc tccggctgac cggccgcagc
     1141 tatttcgatc tcggcgagcc cggccgcagc gtgctggcgc tgcgcgcctc gttcggcacc
     1201 gagccgaccg gcaacatcgg cggcattccc cccgacaagc tcttttatgc cggcggcggc
     1261 ggctcggtac gcggcttcgt ctaccagagc gccggtccgc gcgacgcctt caacaacccg
     1321 ctgggcggcg ccagcgtcgt cgaagccaac gtcgaattcc gccaacgctt cggcaagtcg
     1381 ttcggcgccg tcgccttcgt cgatgccggc agcgcctatc ccggcacgct gcccgatttc
     1441 tcgctgttcg cgccgcgcgt cggcgccggc gccggtctgc gctactacac cgatttcggc
     1501 ccggtgcggc tggatgtcgg ctttcccatc aaccgccgcg acggcgaccc gcccttcggc
     1561 atctatgtca gccttgggca ggcgttttaa tgcgcgcgtt ccgcatcctg gcgatggtcg
     1621 ggggcggcgt ggtggcgctg ttggcgctgc tggtggtgtt cctgcagacg ccgcccggcc
     1681 agcgcacgct ggccgctctt gtgtccggca agagcctgca ggtatccggc ctcggcggct
     1741 tcttcccgac cgatgtgtcc gtggcgaagg tcgagctcct ggatgagcag ggcccgtggc
     1801 tgcatgtcga gaacgcgcgg ctgcgctggt catttacgtc gctgttcgaa ggccgcgtgc
     1861 gcgtcgaggc gctgtcggct tcgctcgtcg atgttctgcg tcctgctgtg cccgacaaga
     1921 ccgaacaggc agcaaagacc agcgactcgt tcgccctgcc cgtcggcgtc gacgtgcagg
     1981 ccctgtcgat cgacaccctt caccttgcga cagcggtcgc cgagatcgaa tcgcgctggg
     2041 ccgtgcatgg caacggcctg ctgtccgccg atctgcacga gggacgcctg cgcctgtcgg
     2101 gcgatcgcag cgacgggccg tcgggcaagc tgtcggccga catccgcttc gacctggcgc
     2161 aacgcaccgt cgatggcgag atcgcgctcg aggaaggaac ggacggcgtg gcggctggct
     2221 tgctgcaacg gcccgacctc gatcgcatat cgatgcggct ggtggccaag ggcgacgccg
     2281 cgtccggcag cggcgatctc actctatctg ccggcgacgc tgccacggcc accggcacgg
     2341 cgcgctggca gcccaacggt gcggccacgg cggtttcggt gcgactcgag gcggcaggcg
     2401 cccgattggc cgagcacggc ggacccgtgt cgctttccgc cgaggcaacg ctcgat
//
LOCUS       DASWGA010000563         4067 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2339831, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000563 DASWGA010000000
VERSION     DASWGA010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4067
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2339831"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1050)
                     /locus_tag="VF991_13325"
     CDS             complement(<1..1050)
                     /locus_tag="VF991_13325"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX9557474.1"
                     /translation="MTVPPPPRIQDLIAAVETARAGLLDEARPAAIERVHARGRLSAR
                     ERLARLIDNGSFREMGALVTPEQDDDGPEAAQRARAQTPSDGVVVGTASIDGRPVVLF
                     SQDFSVHGGSIGKLGSAKTQRALQIAITRGLPLVMILDGGGHRIQDGQDSRHFAHANG
                     MFHNFARASGWIPMVALMLGAGFAGPTNYAGLADFVVMVRGLSTMGLAGPALVKAATG
                     EDTDNMTLGGADLQVDRVGLADLGVDSEDAAFAAAKRFLSYLPSNARAALPMRSEGAE
                     ATRIDDAILDLVPTSARKVYDVRKVLAMIADAGSVFELKPTFAGNLVTAFARLGGRPV
                     GFIANQPQRLGGMLDA"
     gene            complement(1143..1448)
                     /locus_tag="VF991_13330"
     CDS             complement(1143..1448)
                     /locus_tag="VF991_13330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557475.1"
                     /translation="MMASSGFTTKSVTTPAQKASFAKLPQSGFMKMTDKGKTLWVYRA
                     DPTICTCIYVGDQQAYNTYLKKAAAKPPIEDTIQGGSVLGGIQSYNAWADSANPYTE"
     gene            complement(1537..1965)
                     /locus_tag="VF991_13335"
     CDS             complement(1537..1965)
                     /locus_tag="VF991_13335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557476.1"
                     /translation="MKRPTSILVVAGLGLALLACAYKPESKVDLLTDSGFKVLSLNTP
                     TKVASFKKLPAHRLSKTVFKGQSVWVYPDRNVCGCLYIGSQAAYDAYIKKATQQMIDT
                     RVNQMYDNNDPNPYNPTATMATLDWGDAWDAADAYGLYVN"
     gene            complement(1968..2351)
                     /locus_tag="VF991_13340"
     CDS             complement(1968..2351)
                     /locus_tag="VF991_13340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557477.1"
                     /translation="MKLFKSIVVVSALCVAAAGCESNTKFKEDMLASSGFKPVPPNTP
                     MRLASMKSLPPHRLTKTTYKGKTVWVYPDPTICACLYIGNQAAYDAYVQRQRQRNQLD
                     AATVTVPEQALGWDFAPWAEAAVEP"
     gene            complement(2402..4018)
                     /locus_tag="VF991_13345"
     CDS             complement(2402..4018)
                     /locus_tag="VF991_13345"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HEX9557478.1"
                     /translation="MVEWDYVIVGGGSAGCVLANRLTEDPGVKVLLLEAGPRDKSMWI
                     DIPAGFTRLLNHKSFNWNFEMEAEEGMAGRRIPCPRGRTLGGSSSINGMLYVRGQPLD
                     YDTWGQLGNRGWSYSQILPYFKKSENFERGGDDSRGKGGPLNVADMCDTHELCDAFID
                     AASASGYPKNKDYNNGDQEGFGYYQVTMKNGKRQSTARAFLDPVRHRPNLKIETDALV
                     RNVLLEGKRAVGVAYSVHGLPLEARVNREVIVSCGSVQSPGVLEHSGIGQPELLRQHG
                     IEVKHELKGVGENYGDHFAPRMNWRVKLPITLNEQTRGLSLVKEVLKYYSTGRGALAL
                     TAGVVYGFVRTRPGLESPDMQFHMAHASYDTAQKRLLEKEPGMTVVIGQCRPDSRGSI
                     HIKSATPGVEPAIRPNFLSAQIDRDATVAGMQIARKIVSHPSMAKYIAYENKPGKNVN
                     SYDEWLDYARQNGQTTYHVVGTCKMGSDPMAVVDDRLRVHGIAGLRVIDASIMPTVPS
                     GNTNAPTIMVAEKGADMIKEDARAGLKVAA"
BASE COUNT          643 a         1313 c         1359 g          752 t
ORIGIN      
        1 ggcgtcgagc atgccgccca gccgctgcgg ctggttggcg atgaagccga ccggccggcc
       61 gcccagccgg gcaaaggccg tcaccaggtt gccggcgaag gtcggcttca gctcgaacac
      121 gctgccggca tcggcgatca tcgccagcac cttgcgcacg tcgtagacct tgcgcgccga
      181 ggtcggcacc aggtcgagga tggcatcgtc gatgcgcgtt gcctccgcac cctcgctccg
      241 catcggcagc gcggcgcgcg cattgctcgg cagataggac aggaagcgct tggcggcggc
      301 gaaggccgcg tcctcgctat cgacgcccaa gtcggccagg ccgacacggt cgacttgcag
      361 gtcggcgccg cccagggtca tgttgtcggt gtcttcgccg gtggcggcct tgaccagcgc
      421 cggtccggca agccccatgg tcgacaaccc gcgcaccatc accacgaagt cggcgaggcc
      481 ggcatagttg gtcgggccgg cgaagcccgc gcccagcatc agcgccacca tgggaatcca
      541 gcccgaggcg cgggcgaaat tgtggaacat gccgttggca tgggcgaagt ggcgcgaatc
      601 ctggccatcc tggatgcgat gcccgccgcc atcgaggatc atgaccagcg gcaggccgcg
      661 ggtgatggcg atctgcagcg cccgctgggt cttggcgctg ccgagcttgc cgatgctgcc
      721 gccatgcacc gagaaatcct gcgagaagag cacgactggc cggccgtcga tcgacgccgt
      781 gccgaccacg acgccgtcgg acggcgtctg tgcgcgggcg cgttgggcgg cctcgggtcc
      841 gtcgtcgtcc tgttcgggcg tgaccagcgc gcccatctcg cggaacgagc cgttgtcgat
      901 cagccgggcc agccgctcgc gggcgctgag gcgcccgcgg gcatggacgc gctcgatggc
      961 ggcgggacgg gcctcgtcca acagacccgc gcgcgcggtc tcgaccgcgg cgatcaggtc
     1021 ctggatgcgg ggaggcggcg ggacggtcat gtcgctcgag gtggatcggc gctgatccat
     1081 cgcagcgccg tctggttggg ggtccgtcat gcgcacatag tgccgtgcgc ttgcctcagc
     1141 agctactccg tataggggtt cgcgctatcg gcccacgcat tataactctg gatgccgcca
     1201 agaacgctgc cgccttggat cgtgtcctcg atgggcggct ttgcagccgc cttcttcagg
     1261 taggtgttgt aggcctgctg gtcgccgaca tagatgcagg tgcaaatcgt gggatcggcg
     1321 cggtagaccc acagggtctt gcctttgtcg gtcatcttca tgaaaccgct ttggggaagt
     1381 ttcgcgaagg acgccttctg cgccggcgtc gtgaccgact tcgtggtgaa gcccgatgag
     1441 gccatcatgt gttccggtgt ctccggcagg cccgcgcagg ccgcaagcgc agcaaacacc
     1501 cctagagcgg ggagaattga tcggaacgac ctcgtctcag ttgacataga ggccgtaggc
     1561 gtccgcagcg tcccacgcgt cgccccagtc gagggtggcc atggtggccg tgggattgta
     1621 ggggttggga tcgttgttgt cgtacatctg gttgaccctg gtatcgatca tctgctgggt
     1681 cgccttcttg atgtaggcgt cgtaggccgc ctgactgccg atatagaggc agccgcagac
     1741 gttgcgatcg ggatacaccc agacggactg gcccttgaag accgtcttcg agaggcgatg
     1801 ggccggcagc ttcttgaagg acgcgacctt cgtcggcgtg ttcagcgaaa ggaccttgaa
     1861 gcccgagtcg gtgagcagat cgaccttgct ttccggcttg tacgcgcagg ccagcaaggc
     1921 aaggccgagc cctgcaacga ccagaattga cgtcggccgc ttcaccgtca tggctcgacg
     1981 gccgcctcgg cccaaggagc gaagtcccaa cccagggcct gctcgggaac ggtcaccgtc
     2041 gccgcatcga gctggttgcg ttggcgttgc ctctgcacgt aggcgtcata ggcggcttgg
     2101 ttgccgatat agaggcaggc gcagatggtg gggtcgggat acacccagac ggtcttgccc
     2161 ttgtatgtcg tcttggtgag cctgtgcggt ggcaggcttt tcatcgacgc gagcctcatc
     2221 ggcgtgttcg gcggcaccgg cttgaaaccg gaggaggcca gcatgtcctc cttgaacttg
     2281 gtgttgctct cacaacccgc cgcggccacg cacagcgccg aaaccacgac gatcgatttg
     2341 aacagtttca tcgttatccc ccaaacgaac gatggacagc agcttcacga ccggagccgc
     2401 ctcaagcagc gacctttagc ccagcccttg catcctcttt gatcatgtcc gcccccttct
     2461 cggcaaccat gatcgtaggc gcgttggtgt tgcccgaggg cacggtcggc atgatcgagg
     2521 cgtcgatgac ccggagcccg gcgatgccgt gcacgcgcag ccggtcgtcg accaccgcca
     2581 tcgggtcgct gcccatcttg caggtgccga cgacgtggta ggtcgtctgg ccgttctggc
     2641 gggcgtaatc gagccattcg tcgtagctgt tcacgttctt gccgggcttg ttctcatagg
     2701 cgatgtactt cgccatcgac gggtgcgaga cgatcttgcg ggcgatctgc atgccggcga
     2761 ccgtggcgtc gcggtcgatc tgggccgaca ggaagttcgg ccggatcgcc ggctcgacgc
     2821 ccggcgtcgc cgacttgatg tggatcgagc cgcgcgaatc gggccggcac tggccgatca
     2881 cgaccgtcat gccgggctcc ttctcgagca gccgcttctg cgccgtgtcg tagctggcat
     2941 gcgccatgtg gaactgcatg tcggggctct cgaggcccgg ccgggtgcgc acgaagccgt
     3001 agaccacgcc ggcggtcagc gcgagcgcgc cgcggccggt cgaatagtac ttgaggactt
     3061 ccttcaccag gctgaggccg cgcgtctgct cgttcagcgt gatcggcagc ttgacccgcc
     3121 aattcatgcg cggcgcgaag tggtcgccat agttctcgcc gacgcccttc agctcgtgct
     3181 tgacctcgat gccgtgctgg cgcagcagct cgggctggcc gatgccggaa tgctccagca
     3241 cgcccggcga ttgcacggag ccgcacgaca cgatgacctc gcgattgacc cgcgcctcca
     3301 gtggcaggcc gtgcacgctg taggcgacgc ccaccgcgcg cttgccctcc agcaatacat
     3361 tgcgcaccag cgcatcggtc tcgatcttga ggttggggcg gtgccgcacg ggatcgagga
     3421 aggcgcgcgc cgtcgactgg cgtttgccgt tcttcatggt gacctggtag tagccgaagc
     3481 cttcctggtc accgttgttg tagtccttgt tcttcggata gccgcttgcc gacgcggcat
     3541 cgatgaaggc gtcgcacagc tcgtgggtgt cgcacatgtc ggcgacgttg agcgggccac
     3601 ccttgccgcg gctgtcgtcg ccgccgcgct cgaagttctc cgacttcttg aagtagggca
     3661 ggatctgcga ataggaccag ccgcgattgc cgagctgacc ccaggtgtcg tagtcgagcg
     3721 gctggccgcg cacatagagc atgccgttga tcgagctcga gccgcccaag gtgcggccgc
     3781 gcgggcaggg aatgcgcctg ccggccatgc cctcctcggc ctccatctcg aaattccagt
     3841 tgaaggactt gtggttgagc agcctggtga agccggcggg aatgtcgatc cacatcgact
     3901 tgtcgcgcgg accggcctcg agcagcagca ccttgacacc cggatcctcg gtcagccggt
     3961 tggccagcac acagcccgcc gagccgccgc ccacgatgac atagtcccat tccaccatga
     4021 cgcttctttc ctccttagtg catgactcat atcaaggtgg accgctt
//
LOCUS       DASWGA010000564         3841 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_825010, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000564 DASWGA010000000
VERSION     DASWGA010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3841
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825010"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..1109
                     /locus_tag="VF991_13350"
     CDS             168..1109
                     /locus_tag="VF991_13350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557479.1"
                     /translation="MTAYIVRRLFAVLPVMAVVALFVFFLLRFAPGDPAAIIAGDDAT
                     AESIAAVRAKLGLDRPVVEQFAVWLWGLLHGDMGVSIFSNLPVTRLIAQRLEPTLALT
                     LSTLVVAVGLAVPIGVLAAWKARKLVDRLVMGFAVLGFAMPVFVLAYILIYFFAVQWQ
                     LLPVQGYQPIGEGLWPFVQSLILPSVALGVTYMALIARITRASMLEVLQQDYIRTANA
                     KGLATDRVLLLHALKNASVPIITVIGIGIALLISGVVITETVFNIPGLGRLTVDAVLK
                     RDYPIVQGLILVFAAAKVLVNLIIDISYAFLDPRIRY"
     gene            1111..1983
                     /locus_tag="VF991_13355"
     CDS             1111..1983
                     /locus_tag="VF991_13355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557480.1"
                     /translation="MAVLADDLALSPRRFSLLTAARRNPTIAVGGVLLAALIIMAIFA
                     PLIATSDPFKIMPVNRLRPPSERWWFGTDQFGRDVFSRTVYGARVSLIVGLSVALISS
                     VLGLALGLACGYFRRIDGIVMRIMDGLMAIPSILLAIALITLTRPGLGIVIVAIIIPE
                     VPRIVRVVRAVVLSIRSQPYIESAIAGGTRNAKLLLRHVLPNTLAPLIVQSTYVCASA
                     MLIEAGLSFLGAGVPPEVPSWGNIIAQGRTFFQIAPWTILIPGAFLAVTVLAVNLLGD
                     GLRDRLDPRLARRL"
     gene            1980..2966
                     /locus_tag="VF991_13360"
     CDS             1980..2966
                     /locus_tag="VF991_13360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557481.1"
                     /translation="MNAILEVRDLHTQFNTLDGVVRAVDGVSFDVARGETLGIVGESG
                     CGKSVTALSILRLIPPETGRIAKGSIRFEGEELTALSEEEMKRLRGHRISMIFQEPMT
                     SLNPVLTVGTQIAENVVRHMAVSWSAARERACEMLDLVRIADPRRRLDEYPHQLSGGM
                     RQRVMIAMALSCDPQMLIADEPTTALDVTIQAQILDLMLELKEKTGTAIVLITHDLGV
                     VAETAQRVVVMYAGRKVEEAPVEALFENPLHPYTRGLMRAIPRLDVEADAAGARPRLQ
                     EIPGLVPILTQPIVGCAFAARCELATDRCRATPPPFVDVGGGHTVACWEVAP"
     gene            2963..>3841
                     /locus_tag="VF991_13365"
     CDS             2963..>3841
                     /locus_tag="VF991_13365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015689249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557482.1"
                     /translation="MSDAPVLEVQGLVKHFPIHGGLLQRRVGEVRAVDGVSFAIRKGE
                     TLGLVGESGCGKSTIGKTVLKLIEPTAGRILLGGEDVTQLKPGAMWAHRRRIQTIFQD
                     PYSSMNPRLSAGTIVGEPLENFAIARGRETDARVASLFQRVGLRPDAMRKYAHEFSGG
                     QRQRLGIAKALSVNPDLIVADEPVSALDVSVQAQVLNLLIDLQEEYGLAYLFISHDLA
                     VMRHISHRIAVMYLGRIVELSDKRTLFTQPLHPYTEALLSAATAPDPKRRRQRKRIVQ
                     GDVPSPAKPPPGCHFHT"
BASE COUNT          567 a         1344 c         1243 g          687 t
ORIGIN      
        1 ggacccgcgc gtcagcgcgg ggagggtgag gtgggctctt ctcgttcgct gccgaaacat
       61 cccgtttgtt tacacaccac ctcaccctcc cattgcttcg caatgggccc caccctctcc
      121 cccgctgccg cggcggagag ggagtctgaa ggcggagggg ataggtcatg accgcctaca
      181 tcgtgcgccg tctgttcgcc gtcctgccgg tgatggccgt ggtggcgctg ttcgtgttct
      241 tcctgctgcg cttcgcgccg ggcgatccgg cggcgatcat cgccggcgac gatgcgacgg
      301 ccgaatcgat cgccgcggtg cgcgccaagc tcgggctcga ccggccggtg gtcgagcagt
      361 tcgccgtctg gctatggggc ctgctgcacg gcgacatggg cgtgtcgatc ttctccaacc
      421 tgccggtgac gcgattgatt gcccagcggc tggagccgac cctggcgctg acgctctcca
      481 cgctggtcgt ggcagtgggt ctggccgttc cgatcggcgt tttagccgcc tggaaggcgc
      541 gcaagctggt cgatcgcctg gtcatgggtt tcgccgtgct gggcttcgcc atgccggtgt
      601 tcgtgctggc ctacatcctg atctatttct tcgcggtcca gtggcagctc ctgccggtgc
      661 aaggctacca gccgatcggc gaaggcttat ggcccttcgt gcagagcctg atcctgccct
      721 cggtggcgct gggcgtcacc tacatggcgc tgatcgcccg catcacccgg gcttcgatgc
      781 tggaggtgct gcagcaggac tatatccgca ccgccaacgc caagggcctg gcgaccgacc
      841 gcgtgctgct gctgcatgcg ctgaagaacg cctcggtgcc gatcatcacc gtgatcggca
      901 tcggcatcgc gctcttgatc tcgggcgtgg tgatcaccga gaccgtgttc aacatcccgg
      961 ggttgggccg gctcaccgtc gatgccgtgc tgaagcgcga ctatcccatc gtccaggggc
     1021 tgatcctggt gttcgccgcc gccaaggttc tggtgaacct gatcatcgac atctcctatg
     1081 ccttcctcga tccgcgtatc cgctactgac atggccgtcc tcgctgacga tctcgcccta
     1141 tcaccgcgtc gcttctcgct gctgaccgcg gcccggcgca acccgaccat cgccgtcggc
     1201 ggcgtgctgc tggccgccct gatcatcatg gcgatcttcg cgccgctgat cgcaaccagc
     1261 gacccgttca agatcatgcc ggtcaaccgt ctcaggccgc cgtcggagcg ctggtggttc
     1321 ggcaccgacc agttcggccg tgacgtgttc tcgcgcaccg tctacggcgc gcgggtatca
     1381 ctgatcgtcg gcctctcggt cgcgctgatc tcgagcgtgc tcggcctcgc gctgggactt
     1441 gcctgcggct acttccggcg gatcgacggc atcgtcatgc gcatcatgga cgggctgatg
     1501 gcgatcccct cgatcctgct cgccatcgcg ctgatcaccc tgacgcggcc ggggctgggc
     1561 atcgtgatcg tggccatcat catccccgaa gtaccgcgca tcgtgcgggt ggtgcgcgcg
     1621 gtcgtgctct ccatccgctc ccagccctac atcgaaagcg ccatcgccgg aggcaccagg
     1681 aacgccaagc tgctgctgcg ccatgtgctg ccgaacaccc tggcaccgct gatcgtgcaa
     1741 tccacatatg tctgcgcctc ggcgatgctg atcgaggccg gtttgagctt tttaggcgcc
     1801 ggcgtgccgc cggaggtgcc gagctggggc aacatcatcg cccagggccg caccttcttt
     1861 cagatcgcgc cgtggaccat cctgatcccc ggcgccttcc tggcggtcac cgtgctggcg
     1921 gtgaacctct taggcgacgg cctgcgcgac cggctcgatc cccggctggc gagacggctt
     1981 tgaacgccat cctcgaggtc cgcgacctcc acacgcagtt caacacgctg gacggcgtgg
     2041 tgcgcgcggt cgacggcgtg tcgttcgacg tggcgcgcgg tgagacgctg ggcatcgtgg
     2101 gcgaatcggg ctgcggcaag tcagtgacgg cgctctccat cctgcgcctg atcccgcccg
     2161 agaccggccg catcgccaag ggatcgatcc gcttcgaggg cgaggagctg acggcgctct
     2221 ccgaggagga gatgaagcgc ctgcgcgggc atcgcatctc catgatcttc caggagccga
     2281 tgaccagcct gaatccggtg ctgacggtcg gcacgcagat cgccgaaaat gtcgtgcggc
     2341 acatggctgt gtcgtggtcg gccgcacgcg agcgcgcgtg cgagatgctc gacctggtgc
     2401 gcatcgccga tcccaggcgc cggctcgacg aatatccgca tcagctgtcc ggcggcatgc
     2461 gccagcgcgt gatgatcgcc atggcactga gctgcgatcc gcaaatgctg atcgccgacg
     2521 agccgaccac cgcactcgac gtcaccatcc aggcgcagat cctcgacctc atgctggagc
     2581 tcaaggagaa gaccggcacc gccatcgtgc tgatcaccca cgatctcggc gtggtcgccg
     2641 aaaccgccca gcgcgtcgtc gtgatgtatg ccggccgcaa ggtcgaggag gcgccggtcg
     2701 aggcgctatt cgagaacccg ttgcacccct acacgcgcgg cctgatgcgg gcgatcccgc
     2761 ggctcgacgt cgaggccgat gccgcgggcg cgcggccccg gctgcaggag atccccggcc
     2821 tggtgccgat cctgacgcag cccatcgtcg gctgcgcttt tgccgcgcgc tgcgaactcg
     2881 ccaccgaccg ctgccgggcc acgccgccac ctttcgtcga cgtcggtggc ggccacacgg
     2941 tcgcttgctg ggaagtggcg ccatgagcga cgcgccggtc ctcgaggtcc aaggcctggt
     3001 aaagcatttc ccgatccatg gcgggctgct gcagcgccgg gtcggcgagg tgagggcggt
     3061 cgatggcgtg agctttgcga tccgcaaggg cgagaccttg ggcctggtag gcgaatcggg
     3121 ctgcggcaag tcgaccatcg gcaagacggt gttgaaactg atcgagccga cggccggccg
     3181 catcctgctc ggcggcgagg acgtcaccca gctgaaaccc ggcgccatgt gggcgcatcg
     3241 ccggcgcatc cagacgatct tccaggaccc gtactcgtcg atgaaccccc ggctgtccgc
     3301 cggcaccatc gtgggcgagc cactggagaa tttcgccatc gcccgcggcc gcgagaccga
     3361 cgcgcgggtc gccagcctgt ttcagcgcgt cgggctgcgg cccgacgcca tgcgcaaata
     3421 cgcccacgaa ttctcgggcg gccagcgcca gcggctgggc atcgccaagg cattgtcggt
     3481 caatcccgac ctgatcgtag ccgacgagcc ggtgtcggcg ctcgacgtct cggtgcaggc
     3541 ccaggtgctg aacctgctga tcgacctgca ggaggaatac gggctcgcct atctcttcat
     3601 cagccacgac ctcgccgtga tgcgccatat cagccatcgc atcgccgtga tgtatctcgg
     3661 ccgcatcgtc gagctttcag acaagcgcac cctgttcacc cagccgctgc acccctacac
     3721 cgaggcgctg ctgtcagccg ccaccgcgcc cgatcccaag cgccgccgcc agcgcaagcg
     3781 catcgtccag ggcgatgtgc cgagcccggc caagccgccg cccggctgcc acttccacac
     3841 g
//
LOCUS       DASWGA010000565         2975 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_947712, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000565 DASWGA010000000
VERSION     DASWGA010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2975
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_947712"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..1509)
                     /locus_tag="VF991_13370"
     CDS             complement(94..1509)
                     /locus_tag="VF991_13370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX9557483.1"
                     /translation="MPSKGGAAPQTVDLLLSGCDVVTIDGKNSVIRDGAVAVRGNKIV
                     WIGKASAAKRHVTAKSTLDGAGQIAMPGLIDAHVHTAQTLLRGKIAEIGQRRQVKIPI
                     WRNYYIPFEGMLTDEDVYLSGLLCYANMISVGTTCFAEAGGPHPDAMGRAAIDIGIRG
                     FVSLNTVDQGAGVPKTMIATTQQAYDRNVALVKRWKGKAQGTAQGTDRVQAWLSLRQI
                     IVCSPELIKAMAEAARALDVKIHTHLCEGVYEIDYALEKFGKRPAEYLRDLGALDRHM
                     HCAHSVLLSAEEMDLYVKHRPSACHCAFNNYHIGPHRLSEMWRRGIDIGLGTDGAASW
                     GSLDIFQVAHMARVGQQAVMGTPIAYRNVMPSEEILKVATNGGARALGVEKEIGSLEV
                     GKKADILLVDRSQLDHLPLYDPYFVAANTVVGRDVRTVVIDGKLVMKDRELLTVDREE
                     IDRRLAERLPKLMERFDAMTA"
     gene            complement(1513..2535)
                     /locus_tag="VF991_13375"
     CDS             complement(1513..2535)
                     /locus_tag="VF991_13375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007815931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557484.1"
                     /translation="MQRRNFIRATGALALAGSIGAGPASAQAKPVRVALGWINNVEYA
                     GVWMALENGYFKEEGLEVKTLPGGPNAPPPPVTVAAGGAEFGYGTWLPYLDAVGRGND
                     FVLVAGTFPVSPLGILSLPGKPIRSAADIVGKKILAQGPNERTTIDATLALNNLPKQW
                     EFVPAGFSPEPLLSKAGDGYTAYGTNQAVTLEKMGMVRDKDFFFTSFDSMGYKSYANL
                     VFVTRAYLQSERPTVVKFLRALVRGWTENGKDPAVAAKLVVAKYGADLGLDLKQQTRQ
                     NELQYAMLKNPAKPGQPLLVLDRDAIAGPMYAAAKASGRDKLPEVDKLADFSVMEEVH
                     ASLKKS"
     gene            2644..>2975
                     /locus_tag="VF991_13380"
     CDS             2644..>2975
                     /locus_tag="VF991_13380"
                     /inference="COORDINATES: protein motif:HMM:NF036723.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation response protein"
                     /protein_id="HEX9557485.1"
                     /translation="MTSGLLEDASFNQSPAFGDVDLFSADRPLAEAAQRAGLDLAQLS
                     ACGRDYGAAETLDLGRVANENPPKLHIVDGKGNRIDFVEFHPAYHAMMAKSIGHGIHA
                     SAHDGSDRP"
BASE COUNT          454 a         1008 c          990 g          523 t
ORIGIN      
        1 gtcatggctg ggagcgcgcc actccagtgg cgcctctgcc ttggaagcga caaaagatgc
       61 gccactggag tggcgcgctc ccagcaaaga gcttcatgcc gtcatcgcgt cgaagcgttc
      121 catcagcttg ggcaggcgct cggccagccg ccggtcgatc tcttcgcggt cgaccgtcaa
      181 aagctcgcgg tccttcatca cgagcttgcc gtcgatcacg acggtgcgca cgtcgcgccc
      241 caccacggtg ttggcggcga cgaaatacgg gtcgtagagc ggtaagtggt cgagctggct
      301 gcggtcgacc agcaggatgt cggccttctt gccgacctcg aggctgccga tctccttttc
      361 gacgccgagc gcgcgggcgc cgccgttggt cgcgaccttg aggatctcct cgctcggcat
      421 gacgttgcga taggcgatcg gcgttcccat gaccgcctgc tggccgaccc gcgccatgtg
      481 cgccacctgg aagatgtcga gcgagcccca cgaggccgcg ccgtcggtgc ccagcccgat
      541 atcgatgccg cgccgccaca tctcggacag gcgatgcggg ccgatgtgat agttgttgaa
      601 ggcgcagtgg caggccgacg gccgatgctt gacgtagaga tccatctctt cggccgacaa
      661 cagcaccgaa tgggcgcagt gcatgtgccg gtcgagggcg ccgagatcgc gcagatattc
      721 ggccggtcgc ttgccgaact tctccagcgc atagtcgatt tcgtagacgc cttcgcagag
      781 atgggtgtgg atttttacgt cgagcgcgcg ggcggcctcg gccatggctt tgatcagctc
      841 gggcgagcag acgatgatct ggcgcagcga tagccaggcc tgcacccgat cagttccttg
      901 ggcggtcccc tgcgccttgc ccttccagcg cttcaccagc gccacgttgc ggtcgtaggc
      961 ctgctgggtg gtggcgatca tggtcttcgg caccccggca ccctggtcga cggtgttcaa
     1021 ggacacgaag ccgcgaatgc cgatgtcgat cgcggcccgg cccatcgcgt cggggtgcgg
     1081 gccgcccgcc tcggcaaagc aggtcgtgcc gaccgagatc atgttggcgt agcataagag
     1141 gccgctcaga tagacatcct cgtcggtcag catgccctcg aacgggatgt agtagttgcg
     1201 ccagatcgga atcttgacct gccggcgctg gccgatctcg gcgatcttgc cgcgcaacag
     1261 ggtctgcgcc gtgtgcacgt gggcgtcgat caggcccggc atggcaatct ggcccgcgcc
     1321 gtcgagggtc gatttcgccg tgacgtgccg cttggcggcc gacgccttgc cgatccagac
     1381 gatcttgttg cctcggaccg cgacggcgcc gtcgcggatc acgctgttct tgccgtcgat
     1441 ggtgacgaca tcgcagccgc tcagcagcag gtcgaccgtc tgcggcgcgg caccgccctt
     1501 gctaggcacg gctcagctct tcttcagcga ggcgtgcact tcctccatca ccgaaaagtc
     1561 ggcgagcttg tcgacctccg gcagcttgtc gcggcccgag gccttggccg ccgcgtacat
     1621 cggcccggcg atggcgtcgc ggtcgagcac cagcagcggt tggccgggct tggccgggtt
     1681 cttgagcatg gcgtactgca gctcgttctg ccgcgtctgc tgttttagat cgaggccgag
     1741 gtcggcgccg tatttggcga cgaccagctt ggcggcgacc gccgggtcct tgccgttctc
     1801 ggtccagccg cgcacgagcg cgcgcaggaa tttcaccacc gtcggccgct cggactgcag
     1861 gtaggcccgg gtcacgaaca ccaggttggc gtaggacttg tagcccatcg aatcgaagga
     1921 ggtgaagaag aagtccttgt cgcgcaccat gcccatcttc tcgagcgtga ccgcttggtt
     1981 ggtgccgtag gcggtgtagc cgtcgcccgc cttggacaac agcggctcgg gcgagaagcc
     2041 ggccggcacg aactcccact gcttgggcag gttgttcagc gccagcgtgg cgtcgatcgt
     2101 cgtgcgctcg ttggggccct gcgccaggat cttcttgccg acgatgtcgg cggcgctgcg
     2161 gatcggcttg ccgggcagcg acaggatgcc gagcggcgag accgggaagg tgccggcgac
     2221 cagcacgaaa tcgttgccgc gcccgacggc gtcgagatag ggcagccagg tgccgtagcc
     2281 gaactcggca ccgcccgcgg ccacggtgac cggcggcggc ggcgcgttgg ggccgcccgg
     2341 cagggtcttc acctcgagtc cctcttcctt gaagtagccg ttctccagcg ccatccagac
     2401 gccggcatat tcgacgttgt tgatccagcc cagcgccacg cgcaccggct tggcctgcgc
     2461 cgacgccggg cccgcgccga tcgatccggc cagcgcgagc gcgcccgttg cgcggatgaa
     2521 gtttctgcgt tgcatggcat cccctcccat tccccggtca ccgtacaata cggggcgatg
     2581 cctgcaagcc tcgggccagc cggagccttg ccgcggcaac gccgccggcc cagacttgcc
     2641 ggcatgacgt ccggcctgct cgaagacgcc tcgttcaatc agtcgcccgc cttcggcgac
     2701 gtcgacctgt tcagcgccga ccggccgctg gcggaggcgg cccagcgcgc cgggctcgat
     2761 ctcgcccagc tctcggcctg cggcagggat tacggcgcgg ccgaaaccct cgatctcggc
     2821 cgggtcgcca acgagaaccc gcccaagctc cacatcgtcg acggcaaggg caaccgcatc
     2881 gatttcgtcg agttccatcc cgcctatcac gccatgatgg ccaaaagcat cggccatggc
     2941 attcacgcct cggcgcatga cggcagcgac aggcc
//
LOCUS       DASWGA010000566        10104 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2091318, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000566 DASWGA010000000
VERSION     DASWGA010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10104
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2091318"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VF991_13385"
     CDS             complement(<1..183)
                     /locus_tag="VF991_13385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEX9557486.1"
                     /translation="MFTGIVTDIGEITSVTPGGQAGDRRFVIRTRHDATLIGIGASIA
                     CSGCCLTVVEKGQDWFA"
     gene            complement(192..1274)
                     /gene="ribD"
                     /locus_tag="VF991_13390"
     CDS             complement(192..1274)
                     /gene="ribD"
                     /locus_tag="VF991_13390"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEX9557487.1"
                     /translation="MMRAALALARRSLGRTWPNPAVGCVIVRDGRVIARGRTQEGGRP
                     HAEAQAIAHAGESLSGATVYVTLEPCSHHGRTPPCADALVAAGVARVVSALEDPDPRV
                     RGQGHARLRQAGIAVEVGEGGAEAAAINAGFLLRVKEGRPLFHLKIASSLDGRIATAA
                     GESKWITGEAARADGQRLRATHDAILIGLGTAQADDPDLTCRLPGLGARSPLRVVLDS
                     QARLAPTSKLAATARQVPVWLLCTEAAPVVRREALHKAGVEIVDVTVGDDGRVDIAEA
                     ARVLGARGLTRVLVEGGGQVAASFVRAGLVDRVSSYRAGLVVGGDGRSAVAELGFNRL
                     DFAPRFRLESARSVGGDTLETWTRET"
     gene            complement(1279..1743)
                     /gene="nrdR"
                     /locus_tag="VF991_13395"
     CDS             complement(1279..1743)
                     /gene="nrdR"
                     /locus_tag="VF991_13395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEX9557488.1"
                     /translation="MRCPFCGHEDTQVKDSRPTDDNSAIRRRRYCPSCGSRFTTFERV
                     QLRELTVVKKNGQRVQFDRDKLARSISVACRKRPVDPERVERVVNGIVRRLESSGESE
                     IPSTQIGELVMDALRALDPVAYVRFASVYRNFREAKDFEEFISDLAETNLKD"
     gene            complement(1776..3083)
                     /gene="glyA"
                     /locus_tag="VF991_13400"
     CDS             complement(1776..3083)
                     /gene="glyA"
                     /locus_tag="VF991_13400"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEX9557489.1"
                     /translation="MSQAAARMTQSPLPLFTRSLAEADPAIDAAIKGELHRQREQIEL
                     IASENIVSRAVLEAAGSVLTNKYAEGYPGRRYYGGCEEVDKAEQLAIDRACKLFDCSF
                     ANVQPHSGAQANQAVFMALLQPGDKFMGMALDQGGHLTHGSPANQSGKWFKVVSYGVK
                     PDSHLIDYEQMEALARREKPKLIVAGASAYSRHIDWARFRKVADEIGAFFMVDMAHYA
                     GLVAAGVYPSPLPHAHVVTTTTHKTLRGPRGGMVLSTDPDIGKKINSAVFPGLQGGPL
                     MHIIAAKAVSFGEALRPEFKIYAQNVVDNARALASVLSERGLKIISGGTDSHVMLVDL
                     RPKKATGVAAEKVLDRAGITVNKNSIPGDPEKYTVTSGVRLGSPAGTTRGFGVAEFRQ
                     VGHLIADVLDGIAKNGPDGDAQVERQVRTTVQALCARFPIYRD"
     gene            complement(3080..3529)
                     /gene="rpiB"
                     /locus_tag="VF991_13405"
     CDS             complement(3080..3529)
                     /gene="rpiB"
                     /locus_tag="VF991_13405"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF004051.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEX9557490.1"
                     /translation="MPGGAIAVASDHAGFDLKEILKRDLQQAGHEVLDLGTNSTQSVD
                     YPDFGQAMADAIARGKAACGVLVCGTGIGISMAANRNPKVRAAVVHDVTSARLSREHN
                     DANVVAFGQRLIGSEVAREALKVFLATKFEGGRHVGRVAKLAKGCTT"
     gene            complement(3734..4903)
                     /locus_tag="VF991_13410"
     CDS             complement(3734..4903)
                     /locus_tag="VF991_13410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557491.1"
                     /translation="MTPANRDGWRVVWTAFVVGMFGFGVGFYGPAIYLPALHQARGWS
                     ISTISIAITAHYLVGASLIACLPEIWRRLGVGRVTIAGAVLAGSGAIAWASAQQAWQL
                     VPALLLSGAGWAAMSGAALNAIVAPWFEADRPKAISTAFNGASIGGLLFTPLWTALIA
                     GVGLSSAAFVVAAATVGIVCPLAWRYLRHEPAAAAPKAEPPSSRRALLRQPRFVTISA
                     AFALGLFAQLGLFAHLMARLEPDFGAATAALAVSLVTLCAVLGRSTLGWLLGEHDRRV
                     AAAANLLMQMAGSLLLAFGDGMVPLAAGCVLFGLGVGNLTSLPPLIAQREFRPADVGT
                     VVALVIAINQAIFAFAPAILGTLRDYTGNYVVAFLIAAAAQAVAAAIIVYGRRFT"
     gene            complement(4900..5631)
                     /locus_tag="VF991_13415"
     CDS             complement(4900..5631)
                     /locus_tag="VF991_13415"
                     /inference="COORDINATES: protein motif:HMM:NF020034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9557492.1"
                     /translation="MESDSGEPFFIDHDTSRAMPINVLDNPVWHALTGPHRMHALGRG
                     AARHYPRDMAPFSAIAEPSATAYADLAADLPSHAEARLFRPTVEPLPDGWEELDRFAM
                     LQMAAGGVSRAPSAALSTLSMADVPAMLDLVAATKPGPFGSRTPLLGRYLGVWRGDRL
                     VAMAGERLRVPGHVELSAICVHPEARGRGYATALTLHLMRLAFDRGEVPFLHVRPDNV
                     GAVALYRRLGFATRRELVVLWRRPK"
     gene            5600..6205
                     /locus_tag="VF991_13420"
     CDS             5600..6205
                     /locus_tag="VF991_13420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ada metal-binding domain-containing protein"
                     /protein_id="HEX9557493.1"
                     /translation="MKNGSPESDSIAMLDRDECERARVRRDRRYDGRFFSGVRTTRIY
                     CRPVCPVRPAQGKNVEFYPTAAAAEAAGFRPCLRCRPETAPFSPAWQGSRTTVHRAMR
                     LIRDGALDRSGVDDLAARLGIGARHLDRLFRRHIGASPLQVARTLRVQRAKRLLDQTK
                     LAMSDVAARAGFASLRRFNAVFAEVYKRTPSEVRRLRFKPV"
     gene            complement(6260..7372)
                     /locus_tag="VF991_13425"
     CDS             complement(6260..7372)
                     /locus_tag="VF991_13425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX9557494.1"
                     /translation="MKRTYGALAAAAIALVATPAFAQLKIGSAGPMTGQYAAFGEQLK
                     RGATMAVEEINAAGGVNGQKLELAIGDDACDPKQATAVANKMVSDKVAFVAGHFCSGS
                     SIPASDIYKEGKILQITPASTNPKLTDDAAAKGNTTVFRTCGRDDVQGATVGAYILKN
                     NKNAKVAILHDKSPYGKGVADETKKAINKGGLKETMYEAYNDTDKDFTALINKMKQAK
                     IDIIVLGGYHTAGALMIKQSREQGLLAKMMGFDSLETAEFAQLGGAATDGVLMSFPPK
                     AEDDPKNAALVKKFRDAKYNPEGYTLFSYAAVKVWADAAKKAKSTDPAAVAAALRSGT
                     YDSAVGVLAFDQKGDIKNPVYDIYVWKDGKSTPVGK"
     gene            complement(7426..7788)
                     /locus_tag="VF991_13430"
     CDS             complement(7426..7788)
                     /locus_tag="VF991_13430"
                     /inference="COORDINATES: protein motif:HMM:NF045145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557495.1"
                     /translation="MSPIDTFMVEWFGNTLFVVLLLNIVLVGPASFASGHAVALTWRP
                     WWQIAFYTGLLSATLRFLDYALAGGELWSLGGFLLGWLIQLAVAAFAYQLTRARLMVQ
                     QYPWLYRRKGLLGWEERH"
     gene            complement(7785..8513)
                     /locus_tag="VF991_13435"
     CDS             complement(7785..8513)
                     /locus_tag="VF991_13435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557496.1"
                     /translation="MAEPPMLAVRGVATFYGAIQALHGVDLDVARGEIVTLIGANGAG
                     KSTLLMTICGNPRARSGSITFDGEDITGLATHEIIRRGVAQVPEGRRIFPRMSVFENL
                     QMGATLADPAHFQHDLERVFAMFPRLAERRDQRGGTLSGGEQQMLAIARALMSRPRLL
                     LLDEPSLGLAPLIVRQIFEAIGRIAREEGVTIFLVEQNAFHALRLADRGYVLANGRVR
                     LSGGGRELLANAEVRAAYLEGGHL"
     gene            complement(8506..9324)
                     /locus_tag="VF991_13440"
     CDS             complement(8506..9324)
                     /locus_tag="VF991_13440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007562555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557497.1"
                     /translation="MSALQAAPLIEIEHLTMRFGGLLAIDDVSFIGRPREITAIIGPN
                     GAGKTTVFNCITGFYKPTVGRLLLRGEREYLLERMLGHEIGQRARVARTFQNIRLFPA
                     MTVLENLLVAQHNKLMLASGYSVFGLFGLKRYRLAENAAIELARAWLERIGLLADADR
                     PAGELPYGAQRRLEIARAMCTEPRLLCLDEPAAGLNPRESAELNQLLVSIRDRDGIGV
                     LLIEHDMSVVMNISNHVVVLDYGRKIAEGAPAAIQRDPAVIRAYLGTDDEAIDG"
     gene            complement(9321..>10104)
                     /gene="livM"
                     /locus_tag="VF991_13445"
     CDS             complement(9321..>10104)
                     /gene="livM"
                     /locus_tag="VF991_13445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivM"
                     /protein_id="HEX9557498.1"
                     /translation="FWAVLPLAGALAASFGILLGFPVLRLRGDYLAIVTLGFGEIIRL
                     VILNWFDLTNGPAGIGSIPGPTLFGAVFAETAPAGKQTASELLGIPFNGIHRLIFLYY
                     IILLLALITNLFTQRMRRLPVGRAWEALREDETACKALGINPTNTKLTAFAVGAMFAG
                     FAGSFFAAKQRFISPESFTFIESAIILAIVVLGGMGSQIGVVLAAVLLIGLPEWFREL
                     GNYRMLAFGLAMVLIMVFRPRGLIAHREPSVRLHPVASGGSG"
BASE COUNT         1706 a         3372 c         3455 g         1571 t
ORIGIN      
        1 agcgaaccag tcctgtccct tctcgaccac ggtcaggcag catcccgagc aggcaatcga
       61 tgcgccaatg ccgatcagcg tcgcgtcatg cctggtgcgg atcacgaacc ggcggtcgcc
      121 cgcctggccg ccgggagtga cggaggtgat ctcgccgatg tcggtcacga tgccggtgaa
      181 catgtccgta cttaagtctc cctggtccaa gtttccagcg tgtcgccgcc cacggaacgg
      241 gccgattcaa gcctgaaccg gggcgcgaaa tcgagccgat tgaagcccag ttcagccacc
      301 gcagagcggc cgtcgccgcc gacgacgagg ccggcgcgat aactgctgac gcgatccacc
      361 agccccgccc tcacgaaaga agcggcgacc tggccgccgc cctcgaccag cacgcgggtc
      421 aggccgcgcg cgcccaggac gcgcgccgcc tcggcgatat cgacccgccc gtcgtcgccg
      481 accgtgacgt cgacgatctc gacgcccgcc ttatgcaggg cctcgcgccg gacgacgggc
      541 gcggcctcag tacacaggag ccaaaccggc acctggcgcg cggtggcggc gagcttggag
      601 gtcggcgcca gacgcgcctg cgaatcgagc acgacgcgca gcggcgagcg cgcgccaaga
      661 ccgggcagcc gacaggtcaa gtccggatcg tcggcctggg cggtgccgag gccgatcagg
      721 atggcgtcgt gggtggcgcg caggcgctgg ccgtcggcac gcgccgcctc gcccgtgatc
      781 catttgctct cgcccgcggc ggtggcgatg cggccatcga gcgaactggc aatttttaga
      841 tgaaagagcg gccggccttc cttcacccgc agcaggaagc cggcattgat cgcggcggcc
      901 tcggcgccgc cctcgccaac ctcgaccgca atgccggcct ggcgcagcct cgcatggccc
      961 tggcccctga ccctgggatc gggatcctcc agcgccgaga cgacgcgtgc gacgccggcc
     1021 gccaccaggg cgtcggcgca gggcggcgtg cggccatgat gcgagcaggg ttccagcgtg
     1081 acatagaccg tggcgccgct cagcgattcg ccggcatggg cgatcgcctg agcttcggca
     1141 tgcgggcggc cgccttcctg ggtgcggccg cgggcgatca cgcggccgtc gcgcacgatc
     1201 acgcagccca cggccgggtt gggccaggtg cgcccgagcg accggcgcgc cagcgcgagc
     1261 gccgcgcgca tcatcgcctc agtccttgag gttggtctcg gcgaggtcgg agatgaactc
     1321 ctcgaaatcc ttggcctcgc ggaaattgcg gtagaccgag gcgaagcgca cataggcgac
     1381 aggatcgagg gcgcgcaagg cgtccatcac cagttcgccg atctgcgtcg agggaatctc
     1441 gctctcgccg gaactctcca ggcgccgcac gatgccgttg accacccgct cgacccgctc
     1501 gggatcgacc ggccgtttgc ggcaggccac cgagatcgag cgggcgagct tgtcgcggtc
     1561 gaactgcacg cgctggccgt tcttcttgac cactgtcagc tcgcgcaatt gcacgcgttc
     1621 gaaggtcgtg aagcgcgatc cgcacgacgg acagtagcgt cgccggcgga tcgccgaatt
     1681 gtcgtcggtc ggtctcgagt ccttaacctg ggtgtcctcg tgaccgcaga atggacagcg
     1741 catcttctcc cccgtttatt ctctggctta gcgcgtcagt cgcggtaaat gggaaatcgg
     1801 gcacaaagcg cctgcaccgt ggtgcgcacc tggcgctcga cctgggcgtc gccgtcaggg
     1861 ccgtttttcg cgatgccgtc gagcacgtcg gcgatcaggt ggccgacttg gcggaattcg
     1921 gcgacgccga agccgcgtgt cgtgccggcc ggcgagccca gccgcacgcc cgacgtcacg
     1981 gtgtacttct ccggatcgcc cgggatgctg ttcttgttga cggtgatgcc ggcgcgatcg
     2041 agcactttct cggccgcgac gccggtcgcc ttcttgggtc gcagatcgac cagcatgacg
     2101 tggctgtcgg tgccgcccga gatgattttc aggccgcgct cgctcaatac agaggcgagc
     2161 gcgcgggcat tgtcgacgac gttctgggca tagatcttga actcgggccg cagcgcctcg
     2221 ccgaaggaaa ccgctttggc ggcgatgatg tgcatcagcg gcccgccttg caggccgggg
     2281 aacaccgccg agttgatctt cttgccaatg tcaggatcgg tcgacagcac catgccgccg
     2341 cgcggcccgc gcagggtctt gtgcgtcgtc gtcgtcacca catgggcgtg cggcaacggg
     2401 ctgggataga caccggcggc aaccaggccc gcatagtgcg ccatgtcgac catgaagaag
     2461 gcgccgatct cgtcggccac cttgcgaaag cgcgcccagt cgatgtggcg cgaataggcc
     2521 gaggcgccgg ccacgatcag cttgggcttc tcgcggcggg ccagcgcttc catctgctcg
     2581 tagtcgatca gatggctgtc gggcttcacg ccgtaggata cgaccttgaa ccacttgccc
     2641 gactggttgg ccggcgagcc atgggtgaga tggccgccct ggtcgagcgc catgcccatg
     2701 aacttgtcgc ccggctgcag cagggccatg aacaccgcct ggttggcctg cgcgcccgag
     2761 tgcggctgga cgttggcgaa ggagcagtcg aacagcttgc aggcgcggtc gatggcgagc
     2821 tgctcggcct tgtcgacctc ctcgcagccg ccgtagtagc gccggccggg atagccttcg
     2881 gcatatttgt tggtgagcac cgagcctgcc gcttccagca ccgcgcgcga gacgatgttc
     2941 tccgaggcga taagctcgat ctgttcgcgc tggcggtgca gctcgccctt gatcgccgcg
     3001 tcgatcgcgg gatcggcttc ggcgaggctg cgcgtgaaca ggggcagcgg ggactgcgtc
     3061 atccgggcag cggcttggct catgtcgtac aacccttggc aagcttggcg acgcggccga
     3121 catggcggcc gccttcgaac ttggtggcga ggaagacttt tagcgcctcg cgcgccacct
     3181 cggacccgat caggcgttgg ccgaacgcca cgacgttggc gtcgttgtgt tcgcgcgaca
     3241 gacgcgccga ggtgacgtca tgaacgacgg cggcgcgtac cttggggttg cggttggcgg
     3301 ccatcgaaat gccgattccg gtgccgcaca ccaggacgcc gcaggcggcc ttgccgcggg
     3361 cgatggcgtc ggccatagcc tggccgaagt cgggataatc gaccgactgg gtggaattgg
     3421 tgccaagatc gagcacctcg tgaccggcct gttgcaggtc gcgcttaaga atctccttga
     3481 ggtcgaagcc ggcatgatcc gacgcgaccg cgatggcgcc ccccggcatc tcgacgatcg
     3541 atcccctcta gctgttgatc tcccggttac catatccggg gccacaatgt cacggtcccc
     3601 ccaaaatcgt ggaaaccggc cacaagacat tgaatcgcct tgggaaaact gcgaagcccg
     3661 cgggaacatc gcaaaagcat cgaaatgtag ctgccgtcaa gattgcgacg ggcgagtgcg
     3721 ccgggatgga tgctcaggtg aatcgccggc catagacaat gattgcggcc gccacggctt
     3781 gagcggcagc ggcgatcagg aaggccacga catagttgcc ggtatagtcg cgcagagtgc
     3841 cgagaatggc gggcgcgaag gcgaagatcg cttggttgat ggcgatcacc agcgcgacca
     3901 ccgtcccgac atcggctggg cggaattcgc gctgagcgat cagcggcggc aacgatgtga
     3961 ggttgccgac gcccaggccg aacaacacgc agcctgccgc caatggcacc atgccgtcgc
     4021 cgaacgccag caggagagag ccggccatct gcatcaggag attggcagcc gctgccaccc
     4081 tgcggtcgtg ttcgcccagc agccatccca aggtgctgcg ccccagcacc gcgcaaagcg
     4141 tgaccaggct gaccgccaaa gcggccgtcg ccgctccaaa gtcaggctcg agccgggcca
     4201 tcagatgggc gaacaagccg agctgggcga acaggccgag cgcgaaggcg gctgaaatcg
     4261 tcacgaagcg cggctggcgc agcagcgcgc ggcgcgatga cgggggctcg gcctttggcg
     4321 cggcggccgc cggctcgtgt cggagatagc gccacgccag cgggcagacg atgccgaccg
     4381 tggcggcggc aacgacgaat gccgccgacg acaggccgac acccgcgatc agcgcagtcc
     4441 acagcggcgt gaacaacaga ccgccgatgc tggcgccgtt gaaggccgtg ctgatcgctt
     4501 tcggtcgatc agcctcgaac cacggcgcca caatggcgtt gagcgcggcg ccgctcatgg
     4561 ccgcccatcc cgcaccgctc agcagcagcg ccggcacgag ctgccaagcc tgctgtgcgc
     4621 tcgcccaggc gatggcgccc gagcccgcga gcacggcacc ggcgatcgtg acgcggccga
     4681 cgccgaggcg gcgccagatt tcgggcaggc aggcgatcag cgaggcaccc accagatagt
     4741 gcgccgtgat cgctatcgaa atcgtcgaga tcgaccagcc gcgggcctga tgcaacgccg
     4801 gcagatagat ggccggtccg tagaagccga cgccaaagcc gaacatcccc acgacgaacg
     4861 ccgtccagac gacccgccag ccgtcgcgat ttgctggagt catttcggcc gtcgccacag
     4921 caccacgagc tctcgacgcg ttgcgaatcc caggcgccgg tagagcgcga cggcgccgac
     4981 attgtccggc cggacatgga ggaacggcac ctcacccctg tcgaaggcaa gccgcatcag
     5041 gtgcagcgtg agagcggtgg catagcccct cccccgcgcc tcgggatgca cgcaaatggc
     5101 gctcagctcg acatgacccg gcacccgcag gcgctctccg gccatcgcga ccaggcgatc
     5161 accgcgccaa acgccgagat agcgcccgag cagcggcgtg cgcgacccga atggccccgg
     5221 cttggtcgcg gccacaagat cgagcatcgc cggcacgtcg gccatcgaca gcgtcgacag
     5281 cgcggcgctg ggcgcacgcg atacgccgcc tgccgccatc tgcagcatgg caaagcggtc
     5341 gagttcctcc cagccatcgg gcagaggctc cacggtcggc cggaacaggc gcgcctcggc
     5401 gtgcgacggc agatcggccg cgagatcggc ataggcggta gcgctcggct cggcgatcgc
     5461 cgagaacggc gccatgtcgc ggggatagtg tcgcgccgca ccacgaccga gggcgtgcat
     5521 gcgatgcggg ccggtgagcg catgccagac cggattgtcg aggacgttga tcggcatggc
     5581 gcgcgaagta tcatggtcga tgaaaaacgg ctcgccggaa tcggactcca tcgccatgct
     5641 cgatcgcgac gaatgcgaac gcgcccgcgt cagacgcgac cgtcgttacg acggccgttt
     5701 cttctcgggc gtgcgcacga cgcgcatcta ctgccggccg gtctgcccgg tgcggccggc
     5761 gcagggcaaa aatgtcgagt tctatcccac cgctgccgcc gccgaggcgg cgggcttccg
     5821 gccctgcctg cgctgccggc ccgagacggc gccgttctcg ccggcctggc aggggtcgcg
     5881 cacgacggtg catcgcgcga tgcggctgat ccgcgacggc gcgctcgacc gttcgggcgt
     5941 cgacgatctg gcggcccggc tcggcatcgg cgcgcgccat ctcgaccgcc tgttccggcg
     6001 ccatatcggg gccagtccgc tgcaggtcgc gcgaacgctg cgcgtgcagc gcgccaagcg
     6061 gctgctcgac cagaccaagc tcgcgatgtc cgacgtggcg gcccgcgcgg gcttcgccag
     6121 cctgcgccgc ttcaatgcgg tgttcgccga ggtttacaag cgcacgccga gcgaggttcg
     6181 acgcctgcgc ttcaagccgg tctgacggca aagaaaaagg gcccggcgaa ccgggccctt
     6241 tcgtgtaggc ggcggtagct tacttgccga ccggggtcga cttgccgtcc ttccagacat
     6301 agatgtcgta gaccgggttc ttgatgtcgc ccttctggtc gaaggcgagc acgcccacgg
     6361 ccgaatcata ggtgccgctg cgcagcgccg cggccacggc ggccggatcg gtcgacttgg
     6421 ccttcttggc tgcatccgcc cacaccttga ccgccgcgta gctgaacaac gtgtagcctt
     6481 ccggattgta cttggcatcg cggaacttct tcaccagcgc ggcattcttg ggatcgtcct
     6541 cggccttggg cgggaacgac atcagcacgc cgtcggtggc ggcgccgccg agttgggcga
     6601 actccgccgt ttccaaggag tcgaagccca tcatcttggc cagcagtccc tgctcacgcg
     6661 actgcttgat catcagcgcg ccggccgtgt ggtagccgcc gagcacgatg atgtcgatct
     6721 tcgcctgctt catcttgttg atgagcgcag tgaagtcctt gtcggtgtcg ttgtaggcct
     6781 cgtacatcgt ctctttcagg ccgcccttgt tgatcgcctt cttggtctcg tcggccacgc
     6841 ctttgccata gggcgacttg tcgtggagga tcgccacctt ggcgttcttg ttgttcttca
     6901 ggatgtaggc gccgaccgtg gcgccctgca cgtcgtcgcg gccgcaggtg cggaacaccg
     6961 tggtgttgcc cttggcggca gcatcgtcgg tcagtttggg attggtcgag gccggcgtga
     7021 tctgcaggat cttgccttcc ttgtagatgt cggacgccgg gatcgacgag ccggagcaga
     7081 aatgcccagc cacgaacgcg accttgtcgg agaccatctt gttggcgacc gctgtcgcct
     7141 gcttcggatc gcaggcatcg tcgccgatcg ccagctcgag cttctggccg ttgacgccgc
     7201 ccgcggcatt gatctcctcg accgccatgg tggcgccgcg cttgagctgt tcgccgaacg
     7261 cagcatactg gccggtcatc ggaccggccg agccgatctt gagctgcgcg aatgccggcg
     7321 tcgccaccag ggcgatggct gcggcggcca gcgcgccgta agtcctcttc atgcgagact
     7381 cccttgttga ccccggtctc cacggatgtg gagctggacg ctagattagt gccgctcctc
     7441 ccagcccagc aagcctttgc gccggtagag ccacggatat tgctgcacca tgaggcgcgc
     7501 acgcgtcagt tgataggcaa atgccgccac cgcaagctgg atcagccagc cgagcaggaa
     7561 gccgcccagc gaccacaact cgccgccggc cagcgcatag tcgagaaagc gcagcgtcgc
     7621 cgaaagaagc ccagtataga aggcgatctg ccaccacggc cgccaagtga gggccacggc
     7681 atggcctgag gcgaacgagg ccggcccgac caggacgata ttgagcagca gcacgacgaa
     7741 cagcgtgttg ccgaaccatt cgaccatgaa ggtatcaatc gggctcatag gtggccaccc
     7801 tcgagatagg cggcgcgtac ctcggcgttg gccaaaagtt cccggccgcc gccgctcagc
     7861 cgaacccggc cgttggccag cacatagccg cggtcggcca ggcggagcgc gtggaaggcg
     7921 ttctgctcga ccaggaagat cgtaacgccc tcctcgcggg cgatgcggcc gatcgcctcg
     7981 aagatttggc gcacgatcaa gggcgccagg ccgagcgacg gctcgtcgag cagcagcagg
     8041 cgcggccggc tcatcagcgc gcgggcgatc gccagcatct gctgctcgcc gcccgacagc
     8101 gtgccgccgc gctggtcgcg ccgctcggcc agccgcggga acatggcgaa cacccgctcg
     8161 aggtcgtgct ggaagtgcgc cgggtcggcg agcgtcgccc ccatctgcag gttctcgaac
     8221 acgctcatgc gcgggaagat ccgcctgccc tcgggcacct gcgccacgcc gcggcggatg
     8281 atctcgtggg tggcgaggcc ggtgatgtcc tcgccgtcga atgtgatcga gcccgagcgg
     8341 gcgcggggat tgccgcagat cgtcatcagc agggtcgatt tgccggcccc gttggcgccg
     8401 atcagggtaa cgatctcgcc cctggccacg tcgaggtcga cgccgtgcag cgcctggatg
     8461 gcgccataga aggtcgccac gcccctcacc gcaagcatcg gcggctcagc catcgatcgc
     8521 ctcgtcgtcg gtgccgagat aggcgcggat cacggcggga tcgcgctgga tcgccgctgg
     8581 cgcgccttcg gcgatcttgc ggccgtagtc gagcaccacg acgtggttgg agatgttcat
     8641 gaccacgctc atgtcgtgct cgatcagcag cacgccgatg ccgtcgcggt cgcggatcga
     8701 gaccagcagc tggttgagct cggctgattc gcgcggattg aggccggccg ccggctcgtc
     8761 gaggcagagc aggcgcggct cggtgcacat ggcgcgggcg atctccagcc gccgctgcgc
     8821 gccgtacggc aactcgccgg ccgggcggtc ggcgtcggct aaaaggccga tacgctcgag
     8881 ccaagcgcgc gccaattcaa tagcggcgtt ctcggccagg cgatagcgct tgaggccgaa
     8941 cagcccgaac acactgtagc cggacgccag catcaacttg ttgtgctgcg ccaccagcag
     9001 gttttcgagc accgtcatgg cgggaaacag gcggatgttc tggaaggtcc gcgccacccg
     9061 cgcgcgttgg ccgatctcgt ggcccagcat gcgctcgagc agatactcgc gctcgccgcg
     9121 cagcagcagg cggccgacgg tcggcttgta gaagccggtg atgcagttga agaccgtggt
     9181 cttgcccgcg ccgttgggac cgatgatggc ggtgatctcg cgcggccggc cgatgaagga
     9241 gacgtcgtcg atcgccagca gcccgccgaa gcgcatggtg aggtgctcga tctcgatgag
     9301 gggtgctgct tgcagcgcgc tcatccgctg cctcccgagg ccacgggatg caggcggacc
     9361 gagggttcgc gatgggcgat caggccgcgc gggcggaaca ccatgatcag caccatggcg
     9421 agcccgaaag cgagcatgcg gtagttgccg agctcgcgga accattcggg caggccgatc
     9481 agcagcacgg cggccagcac cacgccgatc tggctgccca tgccgcccag cacgacgatg
     9541 gcgaggatga tcgccgattc gatgaaggtg aagctctccg ggctgatgaa gcgctgcttg
     9601 gcggcgaaga aggagccggc gaagcccgcg aacatggcgc cgacggcgaa ggcggtgagc
     9661 ttggtgttgg tcggattgat gccgagcgcc ttgcacgccg tctcgtcctc gcgcagcgct
     9721 tcccaggcgc ggccgaccgg caggcggcgc atgcgctggg tgaagaggtt ggtgatcagc
     9781 gccagcaaca ggatgatgta gtagaggaag atcagacggt ggatgccgtt gaaagggatg
     9841 cccagcagct ccgacgcggt ctgcttgccg gcaggcgcgg tctcggcgaa cacggcaccg
     9901 aacagtgtcg gccccgggat cgagccgatg ccggccggcc cgttggtaag gtcgaaccag
     9961 ttgaggatga ccagccggat gatctcgccg aagcccaggg tgacgatggc gaggtagtcg
    10021 ccgcgcagtc ggagcaccgg gaagcccagc aggataccga aagacgcggc aagcgcgccg
    10081 gccagcggca gcaccgccca gaag
//
LOCUS       DASWGA010000567         1841 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_438936, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000567 DASWGA010000000
VERSION     DASWGA010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438936"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VF991_13450"
     CDS             <1..455
                     /locus_tag="VF991_13450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557499.1"
                     /translation="VGIYRSFIIVICGALALGLQLALTHTRFGSRLRAAVDDARVARG
                     LGIPVGTVFAVTFAVGSGLAGLGGALGTEILGLDPNFPLRFMIYFLIVVTVGGTSGIV
                     GPFVASLLLGVADVAGKYYVPALGAFMVYLVMIAVLVLRPHGLFARPR"
     gene            455..1423
                     /locus_tag="VF991_13455"
     CDS             455..1423
                     /locus_tag="VF991_13455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007758127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557500.1"
                     /translation="MGAAQGLARRASWRWPEIVFWLVAFGALLMPAGKYLILNEIAIL
                     ALFALSLDLILGYVGIVSLGHAAFFGAGAYTAGLLAKHVTGDPLAGLALAIAVATLLG
                     FLTSFLVLRGSDLTRLMVTLGVALVLGELANALPHISGGADGLQGVVMGKLLGRFEFD
                     LFGRTAYAYSLTTLFVLMLLTRRIVHSPFGLSLMAIRRNALRAGALGVPVHARLIAAY
                     TLAAAYAGAAGALLAQTTAFVSLDVFEFHRSADVLLVLIIGGAGWLYGGIAGAVIYKL
                     LQDGIATVTPQYWQFWIGLLLVAFVMVGRQRFVGGLYGLLALARRR"
     gene            1420..>1841
                     /locus_tag="VF991_13460"
     CDS             1420..>1841
                     /locus_tag="VF991_13460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557501.1"
                     /translation="MSVVLETRGLAKRFGGLLATHDVTFRLERGARQALIGPNGAGKT
                     TFVNLLTGVLPPSAGQVLLLGEDITRLRPEARVRRGLVRTFQINQLFGDLTPLETLAL
                     VVDERLALGGDWRRRVGAVDAVSAEVEQVAERFGLLDVL"
BASE COUNT          201 a          631 c          639 g          370 t
ORIGIN      
        1 aggtcggcat ctaccgctcg ttcatcattg tgatctgcgg cgcgctggcg ctcggcctgc
       61 agttggcgct gacgcatacg cgcttcggca gccgcctgcg cgccgccgtc gacgacgccc
      121 gcgtggcacg cggcctcggc atcccggtcg gcacggtgtt cgccgtcacc ttcgcggtgg
      181 gctcgggcct cgccggtctt ggcggcgcgc tggggacgga gatcctgggc ctcgatccca
      241 acttcccgct gcgcttcatg atctacttct tgattgtggt caccgtgggc ggcacgtcgg
      301 gcatcgtcgg cccattcgtg gcctcgctgc tgctgggcgt ggccgatgtc gccggcaaat
      361 actacgtgcc ggcgctcggc gccttcatgg tctatctcgt gatgatcgcc gtgctggtgc
      421 tgcgtccgca cggactgttc gcgcgtccgc gctgatgggc gccgcgcaag gcctggcgcg
      481 acgcgcaagc tggcgctggc cggagatcgt gttctggctg gtggccttcg gcgcgctctt
      541 gatgccggcg ggcaagtacc tgatcctgaa cgagatcgcg atcctcgctt tgttcgcgct
      601 ctcgctcgac ctgatcctgg gctatgtcgg catcgtctcg ctgggccacg ccgccttctt
      661 cggcgccggc gcctacaccg cgggcctttt ggccaagcat gtcaccggtg atcccctggc
      721 gggcctggcg ctcgccatcg ccgtcgccac gctgctgggc tttttaacga gcttcctggt
      781 gctgcgcggc agcgacctca cgcggctgat ggtgaccctc ggcgtggcgc tggtgctcgg
      841 cgaacttgca aacgccctgc cgcacatctc cggcggcgcc gatggcctgc aaggcgtcgt
      901 catgggcaag cttttgggcc gcttcgagtt cgacctgttc ggccgcaccg cctatgctta
      961 cagcctgacc acgctgttcg tgctgatgct gctgacgcgg cgcatcgtgc attcgccgtt
     1021 cggcctgtcg ctgatggcga tccggcgcaa cgcgttgcgc gccggcgcgc tgggcgtgcc
     1081 ggtgcacgca cggctgatcg cggcctatac gctggccgcc gcctatgccg gcgcggcggg
     1141 cgcgctgttg gcgcaaacaa cggccttcgt ctcgctcgac gtcttcgagt tccaccgctc
     1201 ggccgacgtg ctcctggtgc tgatcatcgg cggcgcgggc tggctctatg gcggcattgc
     1261 cggcgcggtg atctacaagc tgctgcagga cggcatcgcg acagtcacgc cgcaatactg
     1321 gcagttctgg atcggcttgc tcctggtcgc cttcgttatg gtcggccgcc agcgcttcgt
     1381 cggcggcctt tacggcctgc ttgctctggc gcggcggcga tgagcgtcgt tctcgaaacc
     1441 cgcggcctgg ccaagcgctt cggtggcctt ttggccactc acgacgtgac gttccggctc
     1501 gagcgcggcg cgcgccaggc cctgatcggt cccaacggcg ccggcaagac gaccttcgtc
     1561 aacctcctga caggcgtgtt gccgccgtcg gcggggcagg tgctgctgct gggcgaggac
     1621 atcacgcggc tcaggcccga ggcgcgggtg cgccgcggcc tggtgcgaac cttccagatc
     1681 aaccagctgt tcggcgacct cacgccgctt gagacgcttg cgctggtggt ggacgagcgg
     1741 ctggcgctcg gcggcgactg gcgccgccgc gtgggcgccg tcgatgccgt gagcgccgag
     1801 gtcgagcagg tggccgagcg ctttggtctt ttggacgtgc t
//
LOCUS       DASWGA010000568         2493 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_188916, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000568 DASWGA010000000
VERSION     DASWGA010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188916"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..933
                     /locus_tag="VF991_13465"
     CDS             <1..933
                     /locus_tag="VF991_13465"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557502.1"
                     /translation="GGRLVDDEGADHQGQGGHRRRRAVLGGRARHVGTVEAGKGRLHL
                     DHPKTIQMTTDKLHKYVFRTASNTDLEGDTMALLVGKYKLTKLCHLELDYAYGNDLEA
                     GILKALPKHAPDAKVVLTLKPKLGATDFNPFIPQVMAAGCDGVISGLWGPHFVSWVKQ
                     AKPLGFFDKIKWISGGEIASHEIAGELKGDYPDNVISNTYELWYHAQDPSHKEFQAKL
                     AKKLNTQETPQWALLGYIGVKYVAAAMEKAKSTEADKVAAALEGMTIPTPVGALTIDA
                     KTHQANIGQFWGPMVKKPDRAYRMMEPAEYIQPK"
     gene            1077..1955
                     /locus_tag="VF991_13470"
     CDS             1077..1955
                     /locus_tag="VF991_13470"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557503.1"
                     /translation="MTLTMFTLNAFYGLALAMNMFIIASGLNLIFGVLRVINFAHGMF
                     YMFGAYIVFTVAKSWGAPFFVGVLAAAAGLAIIALVIERLLLRHLYDKEHLMQLLFTF
                     ALVLLMSDAAKMIWGTDQYSVGYPPGLGGAVNLGFVVLPQYQLFLCVVGPAIAVAMWL
                     LVDRTRWGRIVRAATQDREMLAALGVNVPMVYAAVFTIGSALAGVGGALAAPRVALVP
                     GMDATIINECFIIVIIGGLGNLWGSFLGALAFGFVVQFGTVWAPNWQDVLPYVLMLVV
                     LIIRPWGLLGRPETGH"
     gene            1958..>2493
                     /locus_tag="VF991_13475"
     CDS             1958..>2493
                     /locus_tag="VF991_13475"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557504.1"
                     /translation="MPQRRHLVASAVVVLLLALLPLAGSRYAIDLTTEVLIYVLFALS
                     LNVLIGFTGNISFGHAAYFAIGGYACAILLTTYHWPLVLAMPAAVLLSGATAAAVGYF
                     CVRLTQIYFAMLTLAFAMLVWGIAFKWKEVTGGDDGFTGIKLPAMLTHHVGYFYFTLA
                     TVTVGVAALWVICHSAFGL"
BASE COUNT          408 a          819 c          809 g          457 t
ORIGIN      
        1 ggcggccgcc tcgtcgacga tgaaggagct gatcaccaag gacaaggtgg acatcgtcgt
       61 cggcgggctg tcctcggcgg tcgggctcgc catgtcggaa ctgtcgaagc aggaaaaggt
      121 cgtctacatc tcgaccatcc caagaccatc cagatgacga cggacaagct gcacaagtac
      181 gtcttccgca ccgcctcgaa caccgatctc gaaggcgaca ccatggcgct gctggtcggc
      241 aagtataagc tcaccaagct ctgccatctc gagctcgact acgcctacgg caacgacctc
      301 gaggccggca tcctgaaggc gctgcccaag cacgcgccag acgccaaggt ggtgctgacg
      361 ctgaagccaa agctcggtgc caccgatttc aacccgttca tcccgcaagt catggccgcc
      421 ggctgcgacg gcgtgatctc gggcctgtgg ggcccgcact tcgtgtcgtg ggtcaagcag
      481 gccaagccgc tcggcttctt cgacaagatc aagtggatct ccggcggcga gatcgcctca
      541 cacgagatcg cgggcgagct gaagggcgac tatccggaca acgtcatctc taacacctac
      601 gagctctggt accacgcgca ggatccctcg cataaggagt tccaggccaa gctggcgaag
      661 aagctcaaca cccaggagac gccgcagtgg gcgctgctgg gctacatcgg cgtcaagtat
      721 gtcgccgcgg cgatggaaaa ggccaagtcg accgaggccg acaaggtcgc tgccgcgctc
      781 gagggcatga cgatcccgac gccggtcggg gcgctcacca tcgatgccaa gacgcatcag
      841 gccaacatcg gccagttctg ggggccgatg gtcaagaagc ccgaccgcgc ctatcgcatg
      901 atggagccgg cggagtacat ccagccgaag tgacgacgga gccgcagcgc ggcgcagtcg
      961 tcatcccgag cgaagccgag ggatctttct ttgtcgacgc cgacaaaaga ggtccctcga
     1021 ctgcgcgacc ctgcgggccg ctccgctcgg gatgacggat ggggagacct gcgtaaatga
     1081 ccctcacgat gttcacgctg aacgcgttct atggcctggc gctggccatg aacatgttca
     1141 tcatcgcctc cggcctcaac ctgatcttcg gcgtgctgcg ggtgatcaat ttcgcgcacg
     1201 gcatgttcta catgttcggg gcctacatcg tcttcacggt ggccaagagc tggggcgcgc
     1261 ccttcttcgt cggcgtgctg gcagcggccg cgggcctggc gatcatcgcg ctggtgatcg
     1321 aacggctgct gctcaggcac ctctacgaca aggagcacct gatgcagctg ctgttcacct
     1381 tcgcgctggt gctgttgatg agcgatgccg cgaagatgat ctgggggacc gaccagtatt
     1441 cggtcggcta tccgccgggt ctcggcggcg cggtcaacct gggcttcgtc gtgctgccgc
     1501 agtaccagct gttcctctgc gtggtcgggc cggcgatcgc ggtcgccatg tggctgctgg
     1561 tcgatcgcac gcgctggggc cgcatcgtgc gcgccgcgac ccaggaccgc gagatgctgg
     1621 cggcactcgg cgtcaacgtg ccgatggtct acgccgcggt gttcaccatc ggctcggcgc
     1681 tggcgggcgt gggcggcgcg ctcgcagccc cgcgcgtcgc gctggtgccg ggaatggacg
     1741 ccaccatcat caacgagtgc ttcatcatcg tcatcatcgg cgggctcggg aacctgtggg
     1801 gcagcttcct gggcgcgctc gccttcggct tcgtcgtgca gttcggcacg gtgtgggcgc
     1861 cgaactggca ggacgtgctg ccctacgtgc tgatgctggt ggtgctgatc atccggccct
     1921 ggggcctgct cggccgtccc gagacggggc actgacggtg ccgcagcgcc gccatctggt
     1981 cgcgtccgcg gtcgtcgtcc tgctgctggc gctgctgccg ctggccggca gccgctacgc
     2041 catcgacctc acgaccgaag tgctgatcta cgtcctcttc gcgctcagcc tgaacgtgct
     2101 gatcggcttc acgggcaata tctcgttcgg tcacgccgcc tatttcgcca tcggcggcta
     2161 cgcctgcgcc atcctgctca ccacctacca ctggccgctg gtcctggcga tgccggcggc
     2221 ggtgctgctg tccggcgcca ccgccgcggc ggtgggatat ttctgcgtgc ggctgacgca
     2281 gatctatttc gccatgctga cgctcgcctt cgccatgctg gtgtggggca tagccttcaa
     2341 atggaaggaa gtcaccggcg gcgacgacgg cttcaccggc atcaagctgc cggcgatgct
     2401 gacccatcac gtcggctact tctacttcac cctggcgacg gtgacggtcg gggtcgcggc
     2461 actctgggtc atctgtcatt cggcgttcgg gct
//
LOCUS       DASWGA010000569         1970 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1324788, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000569 DASWGA010000000
VERSION     DASWGA010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1324788"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VF991_13480"
     CDS             <1..274
                     /locus_tag="VF991_13480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-isopropylmalate synthase regulatory
                     domain-containing protein"
                     /protein_id="HEX9557505.1"
                     /translation="DAALRKALIPVYPELVDMRLVDFKVRILDSAGGTAATTRVMIES
                     ADAKRRWSTIGVSPNIVDASYNALYDAITYKLFRDGAKPVQAPLPR"
     gene            494..1558
                     /locus_tag="VF991_13485"
     CDS             494..1558
                     /locus_tag="VF991_13485"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX9557506.1"
                     /translation="MLARLVMWSLPFIVILATLGVWLSSGRYVSTDNAYVKGDRAQIA
                     TELSGIIVEVPVQENQHVSRGQLLFKLDDQSYRHALARIDSEIETARADIRGLRAQWR
                     TKREEIKAASSQLNFAQAEFDRQSDLAEKKIASTQKLQETRMGLEVARQRISAAEEDL
                     LRIEAALAGDPKIHPDDHPKVKQLMAAREEALLQLRRTTIESPLDGIVSKRPVPGSYA
                     TAGVPIMVIVADTDLWIEANFKETELTLVRPGQQAIIKVDTYPDAECTGSVASISQAT
                     GAEFAVLPPQNASGNWVKVVQRIPVRIAVACREGDPPLRVGMSTTVEIDTGHSRSIGS
                     LLAGLGKSLGLSSASATAKP"
     gene            1609..>1970
                     /locus_tag="VF991_13490"
     CDS             1609..>1970
                     /locus_tag="VF991_13490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018897038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557507.1"
                     /translation="MVVMMATIMHALDGTIANVALPSIQGSLSATQEQVSWVITSYIV
                     ASAIMTPFAGFCATRFGLRRTLSTCVIGFTIVSMLCGAAQTLDQLVLFRALQGGFGAA
                     LVPVSQAIMMDTYPREEQG"
BASE COUNT          350 a          666 c          630 g          324 t
ORIGIN      
        1 cgatgctgcg ctgcgaaaag cgctgatccc ggtctatccc gaactggtcg acatgcggct
       61 ggtcgacttc aaggtgcgca ttctcgattc ggcgggcgga accgccgcca ccacccgggt
      121 gatgatcgaa agcgccgatg cgaagcgccg ttggtcgacc atcggggtgt cgcccaacat
      181 cgtcgatgcc tcatacaacg ccctttacga cgccatcacc tataagttgt tccgcgacgg
      241 cgccaagcct gttcaagctc ctctcccccg ctagggggag aggaatatga ggatcaagtt
      301 gaggaaagag aatgcccgcg cggtgggcct agctgccatg tttgtgctgc cagttgacca
      361 acaacaggtc ggggcagacc atatataggt gagagacgga gaacatttgg acgcccggtc
      421 gccagcacag ggacctgccg gagcgccccc ggtcgcggcg gccattccgc gacggtcgcg
      481 catggaaaga cgcgtgctgg cacggctggt catgtggtcg ctgcccttca tcgtcatcct
      541 cgcgaccctc ggcgtctggc tttcgtccgg ccgctacgtc agcaccgaca acgcctatgt
      601 gaagggcgac cgcgcccaga tcgccaccga gctctcaggc atcatcgtcg aggtgccggt
      661 gcaggagaac cagcacgtgt cgcgtggcca gctgctgttc aagctcgacg accagtccta
      721 tcgccacgcg ctggccagga tcgactccga gatcgaaacg gcgcgcgctg atatccgcgg
      781 cctgcgcgcc caatggcgca ccaagcgcga ggagatcaag gcggcgtcga gccagctcaa
      841 cttcgcccag gccgagttcg accgtcagtc cgacctcgcc gaaaagaaga tcgcctcgac
      901 ccagaagctc caggagacgc ggatggggct ggaggtggcg cggcagcgta tctcggcggc
      961 cgaggaggat ttgctgcgta tcgaagcagc ccttgccggc gatcccaaga tccatcccga
     1021 cgatcatccc aaggtcaaac agttgatggc cgcccgcgag gaagcgctgc tgcaactgcg
     1081 ccgcaccacc atcgaatcgc cgctcgacgg catcgtgtcc aagcggccgg tgccgggcag
     1141 ctacgccacg gccggcgtgc cgatcatggt catagtggcc gacaccgatc tttggatcga
     1201 ggccaacttc aaggagaccg agctcaccct ggtgcggccg ggccagcagg ccatcatcaa
     1261 ggtcgacact tatcctgacg ccgagtgcac tggctcggtg gccagcatct cccaggcgac
     1321 cggggcggag ttcgccgtgc tgccgccgca gaacgcgtcg ggcaactggg tgaaagtcgt
     1381 gcagcgcatc ccggtgcgca tcgccgtggc ctgccgcgaa ggcgacccgc cgctcagggt
     1441 cggcatgagc accaccgtcg agatcgacac cggccacagc cgttcgatcg gcagcctgct
     1501 ggccgggctg ggcaaatccc tcggcctgtc gagcgcgtcg gctaccgcaa agccgtgagc
     1561 ccctccacga tcgatcgcgc ggccaggcgg cggcgcggcc tgatcaccat ggtggtgatg
     1621 atggccacca tcatgcatgc gctcgacggc accatcgcca acgtggcgct gccgtcgatc
     1681 cagggttcgc tgtcggcgac acaggagcag gtctcctggg tgatcacgtc ctacatcgtg
     1741 gcttccgcca tcatgacgcc gttcgccggc ttttgcgcca cgcgcttcgg gctcaggcgc
     1801 acgctctcga cctgcgtcat cggcttcacc atcgtctcga tgctgtgcgg cgccgcccag
     1861 acgctcgacc agctcgtgct gttccgcgcc ctgcagggcg gcttcggcgc cgctctggtg
     1921 ccggtgtcgc aggccatcat gatggacacc tatccgcgcg aggagcaggg
//
LOCUS       DASWGA010000570         4360 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2205332, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000570 DASWGA010000000
VERSION     DASWGA010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4360
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2205332"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1423)
                     /gene="leuC"
                     /locus_tag="VF991_13495"
     CDS             complement(<1..1423)
                     /gene="leuC"
                     /locus_tag="VF991_13495"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006467976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEX9557508.1"
                     /translation="MAFRKKAPPPPPPPPRTLFEKIWDAHVVHRQDDGTCVIYIDRHL
                     VHEVTSPQAFEGLRLAGRAVRRPDATIAVADHNTPTTDFSQGIADEESRIQVETLEKN
                     VADFGVPYFGLDDARRGIVHVIGPEQGLTLPGMTIVCGDSHTSTHGAFGALAFGIGTS
                     EVEHVLATQTLIQVPAKNMLIEVNGSLGAGVSPKDVILAIIGKLGTAGGTGYVIEYAG
                     RAIREMTMEGRMTVCNMSIEAGARAGLIAPDETTFQYLEGRPYTPKGGAWDLALGQWR
                     RLPSDKGANFDTSLDLLASDIPPMVTWGTSPQDALPITDVIPDPANAPDENCREAWTR
                     SLAYMGLTPGTRLVDVPIDRVFIGSCTNGRIEDLRAAAEIARGRKVAPNVSAMVVPGS
                     GLVKAEAEKEGLDKIFIEAGFEWRIQGCSMCLAMNADRLEPGQRCASTSNRNFEGRQG
                     PGGRTHLVSPVMAAAAAIAGHFVD"
     gene            complement(1431..1913)
                     /gene="rplS"
                     /locus_tag="VF991_13500"
     CDS             complement(1431..1913)
                     /gene="rplS"
                     /locus_tag="VF991_13500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008194724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEX9557509.1"
                     /translation="MNILDTIGQATIDKVQAERPVPRFEPGDTLRVHVKVQEGNRERL
                     QVYEGLCIGRKNAGVNSAFTVRKISFGEGVERVFPLYGPGIWEIEVVRKGVVRRAKLY
                     YLRDLRGKASRIAEDVEAQRELVAEQAEEAAKRPRREKLKKEKPRGDGTVRAARGGKK
                     "
     gene            complement(1930..2649)
                     /gene="trmD"
                     /locus_tag="VF991_13505"
     CDS             complement(1930..2649)
                     /gene="trmD"
                     /locus_tag="VF991_13505"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEX9557510.1"
                     /translation="MWRATALTLFPEMFPGPLGESLAGKALTEGVWQLQAVDIRRFAR
                     DRHGTVDDAPFGGGAGMVMKPNVLSAAIEAVAEPGVPKVLLSPRGALFTQARGRELAA
                     GPGVVLLCGRFEGVDERVIEAHALEEISVGDFVLSGGEIAAMAVMDCCVRLLPGVMGE
                     PQSASEESFEDGLLEYPHYTRPASWTGPDGIERRVPEVLVSGHHGKVAEWRMRQREEI
                     TRRRRPDLWVRRRTAQANEEK"
     gene            complement(2656..3189)
                     /gene="rimM"
                     /locus_tag="VF991_13510"
     CDS             complement(2656..3189)
                     /gene="rimM"
                     /locus_tag="VF991_13510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002964983.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEX9557511.1"
                     /translation="MAKGRILLGVVAAPHGVRGLVRIRSFTEDPMAIATYGTLSDETG
                     KKTYRVEALSAVKGAVLARIEGVADRTAAEALRGLRLYVERSALPATGEREWYEADLI
                     GLAAVGRDGRNWGKVLAFHDFGGGRTMEVSGGEASRSPVMLPFTDEAVPEIDVEGGKV
                     LVDPPAGLLAGGNAKEA"
     gene            complement(3202..3579)
                     /gene="rpsP"
                     /locus_tag="VF991_13515"
     CDS             complement(3202..3579)
                     /gene="rpsP"
                     /locus_tag="VF991_13515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEX9557512.1"
                     /translation="MLAIRMTRHGAKKRPFFHIVVADSRSPRDGRFIEKLGTYNPLLP
                     REHAQRITLDKERIAHWLKVGAQPSDRVAKFLAQAEMMKPHERREQTKKPQPRAKAQE
                     RLKAAAGAAAAPAEGAEKEAAAS"
     gene            complement(3599..>4360)
                     /locus_tag="VF991_13520"
     CDS             complement(3599..>4360)
                     /locus_tag="VF991_13520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012386256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEX9557513.1"
                     /translation="LMTEVKQISDLSKPKETLLVADAMTGQDAVNVAKAFNERLAVTG
                     IVLTRVDGDARGGAALSMRAVTGRPVKLIGVGEKVDALEPFHPDRIAGRILGMGDIVS
                     LVERAAETIDKEDAEKLAAKVRKGQFDMDDLLSQLRQLRKMGGLQGLMGMLPGAMQAK
                     AAMSKAKIDEKQLKRQEAVILAMTPKERRNPDLIHASRKKRIAKGSGVHVQDVNKLLK
                     QHADMLKMMKRVNKLGEKGFMRSLGGMTPPPGFPR"
BASE COUNT          597 a         1573 c         1417 g          773 t
ORIGIN      
        1 tgtcgacgaa gtggccggcg atcgccgccg ccgccgccat caccgggctc acgaggtgcg
       61 tgcgcccgcc ggggccttgg cggccctcga agttgcggtt ggaggtcgag gcgcagcgct
      121 ggccgggttc cagccggtcg gcgttcatcg ccaggcacat cgagcagccc tggatgcgcc
      181 attcgaagcc cgcctcgatg aagatcttgt ccaggccttc cttctcggcc tcggccttca
      241 ccaggccgga gcccggcacg accatggccg acacgttcgg cgccaccttg cggccgcgcg
      301 cgatctcggc cgcggcgcgc agatcttcta tgcggccgtt cgtgcacgag ccgatgaaca
      361 cgcggtcgat tggcacgtca accaggcggg tgcccggcgt caggcccata taggcgagcg
      421 agcgcgtcca ggcctcgcgg cagttctcgt ccggcgcatt ggccggatcg gggatcacat
      481 cggtgattgg cagcgcgtcc tgcgggctgg tgccccaggt gaccatcggc gggatgtccg
      541 aggccagaag atcgagactc gtgtcgaagt tggcgccctt gtcgctcggc aggcggcgcc
      601 attggcccag cgccaggtcc caggcgccgc ccttgggagt gtagggccgg ccttcgagat
      661 actggaaggt cgtctcgtcg ggcgcgatca ggccggcgcg tgcgcccgcc tcgattgaca
      721 tgttgcagac cgtcatgcgg ccttccatcg tcatctcgcg gatggcgcgg ccggcatatt
      781 cgatcacgta gccggtgccg ccggcggtgc cgagcttgcc gatgatggcg aggatcacgt
      841 cctttgggct gaccccggcc ccgaggctgc cgttgacctc gatcagcatg ttcttggccg
      901 gaacctggat caaggtctgg gtggccagca catgctcgac ctcggaggtg ccgatgccga
      961 aagcgagcgc gccgaaggca ccgtgcgtcg aggtatggct gtcgccgcag acgatggtca
     1021 tgccgggcag ggtcaggccc tgttcggggc cgatcacgtg cacgatgccg cggcgggcgt
     1081 cgtccaggcc gaagtagggc acgccaaaat cggcgacgtt cttttccagc gtctcgacct
     1141 ggatgcgcga ctcctcgtcg gcgatgccct ggctgaagtc ggtggtcggc gtgttgtggt
     1201 cggccacggc aatggtggcg tcgggccggc gcaccgcccg gccggccagg cgcaggccct
     1261 cgaaggcctg cgggctggtc acctcgtgca ccaggtgacg gtcgatatag atcacgcagg
     1321 tgccgtcgtc ctggcgatgg acgacatggg catcccagat cttctcgaac agggtgcgcg
     1381 gcggcggcgg gggcggcggc ggcgccttct tgcggaatgc catggcgggc ctacttcttg
     1441 ccgcccctgg cggcgcgcac ggtgccgtcg cccctgggct tttccttctt gagcttctcg
     1501 cggcgcggcc gcttggccgc ctcttccgcc tgctcggcga ccagctcgcg ctgggcctcg
     1561 acgtcctcgg cgatgcggct cgccttgccg cgcaggtcgc gcaggtagta gagcttggcg
     1621 cggcgcacca cgcccttgcg cacgacctcg atctcccaga tgcccggacc atacagcggg
     1681 aacacgcgct cgacgccctc gccgaagctg atcttgcgca ccgtgaaggc tgagttcacg
     1741 ccggcgttct tgcggccgat gcacaggccc tcatagacct gaagccgctc gcggttgcct
     1801 tcctgcacct tgacgtgcac gcgcagcgtg tcgcccggct cgaagcgcgg taccggccgc
     1861 tcggcctgca ccttgtcgat cgtcgcctgg ccgatcgtgt ctagaatgtt catcgcatcc
     1921 atcctttcgt cacttctctt cgttcgcctg cgcagtccgc cggcgcaccc acagatcggg
     1981 ccgccgccgc cgcgtgatct cttcccgctg ccgcatccgc cattcggcga ccttgccgtg
     2041 gtggcccgag accagaacct ccggcacgcg ccgctcgatt ccgtcgggtc cggtccagct
     2101 cgccggcctc gtatagtgcg ggtattccag caatccgtcc tcgaaactct cctcgctcgc
     2161 cgattgaggc tcgcccatca cgccgggcaa cagccgcacg cagcaatcca tcaccgccat
     2221 ggccgcgatc tcgccgcccg aaagcacgaa atcgccgacc gagatctcct ccaacgcgtg
     2281 ggcctcgatg acgcgctcgt cgacgccctc gaaccgcccg cacagcagca ccacgcccgg
     2341 acccgccgcc agctcccgcc cgcgcgcctg agtgaacagc gcgccgcgcg gcgatagcag
     2401 caccttcggc actcccggct cggcgaccgc ttcgatcgcc gccgacagca cgttgggttt
     2461 catgaccatg ccggcgccgc ccccgaaggg cgcatcgtcc accgtgccat ggcggtccct
     2521 ggcgaaccgt cttatgtcga cggcttgcag ctgccacacg ccttccgtca acgccttgcc
     2581 ggccaggctc tcgcccagcg gccccggaaa catctccggg aagagcgtca gcgccgtcgc
     2641 gcgccacacc ttgtcctacg cctccttcgc attcccgccc gccagcagac cggccggcgg
     2701 atcgaccaaa accttgccgc cctcgacgtc gatctcgggc accgcctcgt cggtgaacgg
     2761 cagcatcacc ggactgcgcg atgcctcgcc gcccgacacc tccatcgtcc gcccgccgcc
     2821 gaaatcgtgg aaggctaaaa ccttgcccca attccggccg tcccggccga ccgcggcgag
     2881 accgataagg tccgcctcgt accattcccg ctcgcccgtc gccggcaatg cgctgcgctc
     2941 cacatagagc cgcagtcccc gcaatgcctc ggccgccgtg cgatcggcta cgccctcgat
     3001 ccgggccagc accgcgcctt tgacggcgct caaggcctcg acccggtacg tcttcttccc
     3061 cgtctcgtcc gacagcgtgc cgtaggtggc gatcgccatc gggtcctcgg tgaagctcct
     3121 gatccgcacc aggccgcgca caccgtgcgg cgccgcgacg acgccgagca ggatacggcc
     3181 cttagccacc aggacgtctc atcagctcgc ggcagcctcc ttctcagccc cctcggcagg
     3241 tgccgcggcg gcgccggcgg cggccttcag gcgttcctgc gccttggcgc gcggctgcgg
     3301 tttcttggtc tgctcgcggc gctcgtgcgg cttcatcatc tcggcctggg cgaggaactt
     3361 ggcgacccgg tccgacggct gggcgccgac cttcagccag tgcgcgatgc gctccttgtc
     3421 gagcgtgatg cgctgggcgt gctcgcgcgg cagcagcgga ttgtaggtgc cgagcttctc
     3481 gatgaagcgg ccatcgcgcg ggctgcgcga atcggccacc acgatgtgga agaacggccg
     3541 cttcttggcg ccatgacggg tcatacggat tgctagcatt ctttctcctt cgatggcttc
     3601 agcgcggaaa gccgggcggc ggcgtcatgc ctccgaggct gcgcatgaat cccttctctc
     3661 cgagtttgtt gacgcgtttc atcatcttca acatgtcggc gtgctgcttc aggagcttgt
     3721 tgacgtcctg gacatgcacg cccgagccct tggcaatgcg cttcttgcgc gaggcgtgga
     3781 tcaggtcggg attgcgccgc tccttgggcg tcatcgcgag gatgaccgcc tcctggcgct
     3841 tgagctgctt ttcgtcgatc ttggccttgg acatggcggc cttggcctgc atggcgcccg
     3901 gcagcatgcc catcaagccc tgcaggccgc ccatcttgcg cagctggcgc agctggctca
     3961 gcaggtcgtc catgtcgaac tggcccttgc gcaccttggc ggcgagcttc tcggcgtctt
     4021 ccttgtcgat ggtctcggcg gcgcgctcga ccagcgagac gatgtcgccc atgccgagga
     4081 tgcggccggc gatgcggtcg ggatggaacg gctcgagcgc gtcgaccttc tcgccgacgc
     4141 cgatcagctt gaccggccgg ccggtgacgg cgcgcatgga gagcgccgcg ccgccgcggg
     4201 cgtcgccatc gactctggtc agcacgatgc cggtgacggc cagccgctca ttgaacgcct
     4261 tggcgacatt gaccgcgtcc tggccggtca tggcgtcggc gaccagcagc gtctccttgg
     4321 gcttggagag gtcggagatc tgcttgacct ccgtcatcag
//
LOCUS       DASWGA010000571         5160 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1964823, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000571 DASWGA010000000
VERSION     DASWGA010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5160
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1964823"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..894)
                     /locus_tag="VF991_13525"
     CDS             complement(<1..894)
                     /locus_tag="VF991_13525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9557514.1"
                     /translation="MKRIGIDVGGTNTDAVLIEDGKVAGAVKAPTSEDVTTGILDSLK
                     SLGATGVLKGKRIDGVMIGTTHFINAVVQRRQLTRVAALRLGMPASASLPPFCDWPED
                     LANLVRGGVWMVEGGHEYDGRLFMPLDEAAVTKAAQEMKAAGLKSVGISSIFSPLDPS
                     HEKRAAELVMAVIPDAAITCSSDLGRIGLLERENAGLLNAALADLASETIAAFETAIQ
                     ESGIAAPLFITQNDGTVAEAGQARRLPVYSFASGATNSMRGAAYLSGLADAMVIDVGG
                     TTTDVGQLKLGFPREANSVVKV"
     gene            complement(891..1973)
                     /locus_tag="VF991_13530"
     CDS             complement(891..1973)
                     /locus_tag="VF991_13530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF917 domain-containing protein"
                     /protein_id="HEX9557515.1"
                     /translation="MNRRDITLDDIESLAVGAWILGTGGGGNPYLPLLNMRALYREGH
                     RVQLIDAADLADDDWVGTVANMGAPLVGQERLTDSLTLARAVSVMEKHTGHHFAALMS
                     MEIGGANGVRPLMAAAHLKRPVVDSDTMGRAYPEAQMTSVAVGGLTPYPLTAVDVRGF
                     ESIVHKVPTWKWAERVARKICVEYGSVAATCQPPRTGAEVKQWGIHGTTTKAMAIGRA
                     VREAQRRHDDPIAAILSVEPGKLLYKGKVIDVERRATEGFLRGRVRFDGMDDWRGAVL
                     VINFQNEWIVARRDGEAIAMSPDLICVLDSVSGEAVGSETIRYGQRVTVIALPPPAVF
                     LSPRGLDHVGPRAFGYDLEFRSVFSA"
     gene            complement(1983..3062)
                     /locus_tag="VF991_13535"
     CDS             complement(1983..3062)
                     /locus_tag="VF991_13535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF917 domain-containing protein"
                     /protein_id="HEX9557516.1"
                     /translation="MPLRDITLDDIESLAVGAWVLGTGGGGSPYLGLLNMRALYKEGH
                     RVQLMPSDELLDDDWVAAVSNMGAPLVGQERLTDSRTIARAVDLMEQHTGHRFRGIMS
                     LEIGGGNSIQPLMAAAHLKRPVIDSDMMGRAYPEAQMTSVAVGDLVPCPLTSVDVRGL
                     ESVVEKVPTWKWMERVSRKICVEYGSIASTCKAPRTGAEVKKWGVHGTTTKAIAIGHA
                     VREAQRKHEDPIAAILGVEPGKILYRGKVVDVERRATEGFLRGRTRFDGMDDYKGTML
                     ELNFQNEWIVAWLDKKPIAMSPDLICVLDSVSVEAVGTETIRYGQRVTVIALPPPSVF
                     LSEKGLRHVGPRAFGYDIDFKSVFA"
     gene            3148..3717
                     /locus_tag="VF991_13540"
     CDS             3148..3717
                     /locus_tag="VF991_13540"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX9557517.1"
                     /translation="MSEPIKLVAFCGSLRQGSFNKMALQAFIERVPAGTSVKTVEIGD
                     WPLYNADIQAKGFPDKVQAAQKVMLEADGIVLATPEYNYGTSGVLKNAIDWLSRMTPQ
                     PFAAKPIAMFGASGGALGTARAQYQLRQTFVFLDGRPVNKPEVMIGAAQTRFADGKLT
                     DEATGKLLVDLGASLALAIRQAKAAANVK"
     gene            complement(3865..5100)
                     /locus_tag="VF991_13545"
     CDS             complement(3865..5100)
                     /locus_tag="VF991_13545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9557518.1"
                     /translation="MDDRSSTVETIKVRCCIVGGGPAGMMLGFLLARAGVKSVVLEKH
                     GDFLRDFRGDTVHPSTLNVMDELGLLDDFLKLPHQEVSRFSAQFGDQRVMVADFSHLP
                     VRARFIAMMPQWDFLNFLAAQGKRYPAFSVLMHAEATGLIEEGGRVAGVRATIEGTPQ
                     EIRADLVVGADGRHSMVRARAGLPVKVLGAPMDVLWFRLSHKPSDSIETMGRFDRGSI
                     LVMFDRGDYWQCAYVIAKDTAEALRAEGIEKFRARIVELMPFVADRVHELRTVDDLKL
                     LTVGIERLETWWRPGLLCIGDAAHTMSPIGGVGVNIAVQDAVAASNILAAPLKEGRLG
                     DSDLEAVQARRLWPVRATQAAQVFLQNRMIAPTLAGTRPLRPPWPVRLLAAVPFLRRI
                     PARLLGLGVQPEHVKTKPA"
BASE COUNT          892 a         1729 c         1702 g          837 t
ORIGIN      
        1 caccttcacc accgagttgg cctcgcgcgg aaagccgagc ttgagctggc cgacgtcggt
       61 ggtggtgccg ccgacgtcga tcaccatggc gtcggccagg cccgagagat aggccgcgcc
      121 gcgcatcgaa ttggtggcgc ccgaggcgaa ggaatagacc ggcaggcggc gcgcctgccc
      181 cgcttcggcc accgtgccgt cgttctgggt gatgaacaac ggtgcggcaa tgccggactc
      241 ttggatcgcc gtctcgaacg cggcgatggt ctcgctcgcc aggtcggcaa gggccgcgtt
      301 cagcaggccg gcattctcgc gctccagcag gccgatgcgg cccaagtccg aggaacaggt
      361 gatggcggca tcaggaatca cggccatgac cagctcggcg gcgcgctttt catggctggg
      421 atcgagcggc gagaagatcg aggagatgcc gacggatttg aggcctgccg ccttcatctc
      481 ctgcgcggcc ttggtgacgg cagcctcgtc gaggggcatg aagagccggc cgtcatattc
      541 gtggccgccc tcgaccatcc acacaccgcc acgcaccagg ttagcgagat cctccggcca
      601 gtcgcagaac ggcggcagcg aggccgaggc cggcatgccc agtcgcagcg ccgccaccct
      661 ggtgagctgc cggcgctgaa ccacggcgtt gatgaaatgt gtggtgccga tcatcacgcc
      721 gtcgatgcgc ttgcccttga gcaccccggt cgcgccgagg cttttcagcg aatcgaggat
      781 gccggtggtg acgtcctcgc tggtcggcgc cttcaccgcc cctgccacct tgccgtcttc
      841 gatcaaaacg gcgtcggtgt tggtgccgcc tacgtcgatg ccgatgcgtt tcatgcggaa
      901 aacacgctcc tgaactcgag gtcgtagccg aaggcgcgcg gtccgacatg gtcgagcccg
      961 cgcggcgaga ggaaaaccgc cggcggcggc agggcgatca cggtgacgcg ctggccgtag
     1021 cggatggttt cgctaccgac cgcctcgccc gacaccgagt cgagcacgca gatcaggtcg
     1081 ggcgacatgg cgatcgcctc gccgtcgcgt cgcgccacga tccattcgtt ctggaagttg
     1141 atcacgagga cggcgccgcg ccagtcatcc attccgtcga agcgcacgcg cccacgcaaa
     1201 aagccttcgg tggcgcggcg ttcgacgtcg atcaccttgc ccttgtacaa aagcttgccc
     1261 ggctcgaccg acaggatggc ggcgatcgga tcgtcgtgcc tgcgctgggc ctcgcgaacg
     1321 gcgcgaccga tggccatggc cttggtggtc gtgccgtgga tgccccactg cttgacctca
     1381 gcaccggtgc gcggcggctg gcaggtggca gcgaccgaac cgtattcgac gcaaatcttg
     1441 cgcgcgaccc gctcggccca tttccaggtc ggcaccttgt gcacgatgct ttcaaagccg
     1501 cgcacgtcga ctgcggtcag cgggtaaggc gtgaggccac ccaccgccac cgacgtcatc
     1561 tgggcttcgg ggtaggcgcg gcccatcgtg tctgaatcga ccaccgggcg cttgaggtgt
     1621 gccgcggcca tcagcggccg cacgccgttg gcgccgccga tctccatgct catgagagcg
     1681 gcgaagtgat ggccggtatg cttctccatg accgaaacgg cgcgggcgag ggtgaggctg
     1741 tcggtcagcc gctcctgacc gaccaggggc gcgcccatgt tggcgacggt gccgacccag
     1801 tcgtcatcgg ccaggtccgc agcatcaatg agctgcacgc gatggccttc gcgatagagg
     1861 gcccgcatgt tcaagagcgg caggtaagga ttgccgccgc cgccggtgcc caggatccag
     1921 gcaccgacag cgagcgattc gatgtcatcg agggtgatgt cgcgcctatt cacgtaaaaa
     1981 tctcacgcga acacgctctt gaagtcgatg tcgtagccga aggcgcgcgg gccgacatgt
     2041 cttaggccct tttccgacag gaacaccgac ggcggcggca gggcgatcac agtgacccgc
     2101 tggccgtagc ggatggtctc ggtgccgacc gcttcgaccg acaccgaatc gagcacgcag
     2161 atcaggtcgg gcgacatggc gatgggcttc ttgtcgagcc aggccacgat ccattcgttc
     2221 tggaaattga gctccaacat ggtgcccttg tagtcgtcca tgccgtcgaa gcgggtgcgg
     2281 ccgcgtaaaa aaccctcggt ggcgcggcgc tcaacgtcga cgaccttgcc gcggtagagg
     2341 atcttgcccg gctcgacgcc caggatggcc gcgatcggat cctcgtgctt gcgctgggcc
     2401 tcgcgcacgg catgaccgat ggcgatcgcc ttggtggtgg tgccgtggac gccccacttc
     2461 ttcacctcgg cgccggtgcg tggcgccttg caggtcgagg cgatcgagcc gtactcgacg
     2521 cagatcttgc ggctcacccg ctccatccat ttccaggtcg gcactttctc caccaccgat
     2581 tccagcccgc gcacatcgac tgacgtaagc ggacagggca cgaggtcgcc gaccgcgacc
     2641 gacgtcatct gcgcctcggg ataggcgcgg cccatcatgt cggaatcgat caccgggcgc
     2701 ttcaaatgcg ccgccgccat cagcggctgg atggaattcc cgccgccgat ctccagcgac
     2761 attatcccgc ggaagcggtg gcccgtgtgt tgctccatca agtcgacggc gcgggcgatg
     2821 gtgcggctgt cggtgagccg ctcctggccg accagcggcg cgcccatgtt ggacacggcg
     2881 gccacccagt cgtcgtctag aagctcgtcg gagggcatga gctgcacgcg atggccctct
     2941 ttgtagaggg cgcgcatgtt taaaagcccg agatagggac tgccgccgcc gccggtaccc
     3001 aagacccagg cgccgacggc gagcgattcg atgtcatcca gcgtgatgtc gcgtagcggc
     3061 attgcgttgc taattctccc gacggcttct atgtagccgc ctgcttgcgt gctgacaaag
     3121 gaccagtaac ccgggagaaa ccgagcaatg tccgagccaa tcaaactcgt cgccttctgc
     3181 ggcagcctgc gccagggatc gttcaacaag atggcgctgc aggccttcat cgagcgcgtc
     3241 ccggccggca cgtcggtaaa gaccgtcgag atcggcgact ggccgcttta caacgccgac
     3301 atccaggcca agggcttccc cgacaaggtc caggcggcgc agaaggtcat gctcgaggcc
     3361 gacggcatcg tgctggccac tcccgaatac aactacggca cttccggcgt gctcaagaac
     3421 gccatcgact ggctgtcgcg catgaccccg cagcccttcg ccgccaagcc gatcgccatg
     3481 ttcggcgcct ccggcggcgc gctgggcacg gcgcgcgcgc agtatcagct gcgccagacc
     3541 ttcgtgttcc tcgacggccg gccggtgaac aagcccgagg tgatgatcgg cgcggcgcag
     3601 acccgcttcg ccgacggcaa gctcaccgac gaggccaccg gcaaactgct cgttgacctc
     3661 ggcgcgtcgc tggcgctcgc catccggcag gccaaggcgg cggcgaacgt gaagtagcgc
     3721 tggcggcgcg ccactgcgcg cggagtaacc tccgcgcgga agtggcgcga tcatgctctt
     3781 ccggaccgcg ggcgtcacgc ccgctcatga tcatgagcga gccagaggct cgcggtccaa
     3841 aagagcatga agtgacggcg aagattacgc cggcttggtc ttcacatgtt cgggctgcac
     3901 gcccagcccc agcaggcggg cagggatgcg gcgcaggaac gggacggcag ccagcagccg
     3961 caccggccag ggcgggcgca gcgggcgcgt accggcgagg gtcggtgcga tcatcctgtt
     4021 ctggagaaag acctgcgccg cctgcgtggc gcgcaccggc cacagccggc gtgcctgcac
     4081 agcttcgagg tcggaatccc ctagccggcc ctccttgagc ggcgcggcca ggatgttgga
     4141 ggcggcgacc gcgtcctgga ccgcgatgtt cacgccgacg ccgccgatcg gcgacatggt
     4201 gtgggccgca tcgccaatgc agagcagtcc gggcctccac cacgtttcca gccgctcgat
     4261 gcccacggtc aggagcttca ggtcgtccac ggtcctgagc tcatgcacgc ggtcggcgac
     4321 gaacggcatg agctcgacga tgcgcgcgcg gaacttctcg atgccctcgg ccctcagcgc
     4381 ctcagccgtg tccttggcga tgacataggc gcactgccag tagtcgccgc ggtcgaacat
     4441 caccaggatg ctaccgcgat cgaagcggcc catggtctcg atcgaatcgc tgggcttgtg
     4501 ggagaggcgg aaccacagca cgtccatcgg cgcgcccagc accttgaccg gcaaaccggc
     4561 gcgggcgcgt accatggaat ggcggccgtc ggcaccgaca acgaggtcgg cgcgaatctc
     4621 ttgcggcgtg ccctcgatcg tggcgcgcac acccgccacc cggccgccct cctcgatcag
     4681 gccggtcgcc tcggcgtgca tcagcacgct gaaggccggg tagcgcttgc cctgggcggc
     4741 cagaaaattg aggaaatccc attgcggcat catggcgatg aagcgggcgc gcaccggcag
     4801 gtgggagaag tcggcaacca tgacccgctg atcgccgaac tgggcgctga aacgcgagac
     4861 ttcctggtgc ggcagcttca ggaagtcgtc gagcagcccc agctcgtcca tcacattcag
     4921 cgtcgagggg tgcacggtgt cgccgcggaa gtcgcgcaga aaatcgccgt gtttctccag
     4981 caccaccgat ttcacgccgg cacgcgccag caagaagccc agcatcatgc cggccgggcc
     5041 gccgccgacg atgcagcagc gcaccttgat tgtttcgacg gtgctcgaac gatcgtccat
     5101 ggttgcaact ccaagccggc acccacatgt ctatataaag gatctattcg gccttagttt
//
LOCUS       DASWGA010000572         3908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_698416, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000572 DASWGA010000000
VERSION     DASWGA010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3908
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698416"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VF991_13550"
     CDS             <1..807
                     /locus_tag="VF991_13550"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9557519.1"
                     /translation="IAAPGGYRVTGEWHFSSGYRQANWIGAHAHVVEPDGSLRLNRFG
                     RPTVRTLLMPKARTTPIHDWHTLGMRGTASEGYSIKDVFVPEAFSGTREDPSLRRDRG
                     PLYAFTTQGLYATGVAGVALGLARAMLDAFIELALEKAPRNLGRLADSPVVQSDIARR
                     EADLGAARAFLVEILKEIWQRADDIEPIGTAERARLRLGCTQAIHVAEKTADWVYKAA
                     GTSAIFIGTPFERRFRDMHTLSQQIQSREAHFETVGRIMLNGDPDGTFLG"
     gene            complement(917..1372)
                     /locus_tag="VF991_13555"
     CDS             complement(917..1372)
                     /locus_tag="VF991_13555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557520.1"
                     /translation="MIRARRLSIGLQLLPLVIVGACASGPVAPQPADQDAKRFDRPAP
                     DKGALYIYRPGWMALTTTIDVAIVGGANAQLGSNTYVRLEGPPGPVEIDCKIGDKTTA
                     RQVEIQDGQTRFVEVSVKVGWWTPGCEIAEVPPDQGQAAVLASKRIEPK"
     gene            complement(1430..1828)
                     /locus_tag="VF991_13560"
     CDS             complement(1430..1828)
                     /locus_tag="VF991_13560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557521.1"
                     /translation="MRRVLASLVLLPLLLAGCGQTNAEFDMRLREMAGTNERDLLGVM
                     GRIPDNSYQLDEETKILQWRWDTSYMSPGMPPMYTRVGRSWMPMGGFPPSFVREGCIV
                     EWTVSKGATQNYRWQGRGCRSVTLITTPTP"
     gene            2008..3291
                     /locus_tag="VF991_13565"
     CDS             2008..3291
                     /locus_tag="VF991_13565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557522.1"
                     /translation="MTCAALLVLGPFNRAFKDAERYGYLTDIMPGDWGATNIWLDSTG
                     CAVDRGVWLALCENGKLVPISERAIADDPGHALLLDLWSLATGKRATLPDVARLNTLV
                     DTIGLLALAGLLFALRAWLTAIVLMALGPVEYLGWMATSPHWSFIGVASLGAVLPMAL
                     AGRELGLLSRRGGALWIAAGLVFLALATLIREPIGIMGVLLSLGAAAVLLVRRPKRIA
                     GLALVSVLALAAFTTPRWVVAARDAAFDMQPAQRLARHGISHTLYIGLGFVENKWGIR
                     YEDAYGEETASKAQPPLVFASPEYFRLAGQLYFARWAEDPIEVSRIYFEKAWMLLGRP
                     TLYPGPPFGIVLLIGLIHFLAATALGAWRRIGFMQGLVIEAVAVGFLLLFLAQAMAAL
                     PSHNYVMPVNAFVVVLLGAIVEFLVRALLRIRPAW"
     gene            complement(3292..3669)
                     /locus_tag="VF991_13570"
     CDS             complement(3292..3669)
                     /locus_tag="VF991_13570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557523.1"
                     /translation="MRIAILLALATLAGACAPKSYTMQGKDADQMIKDEAQCRAQVRA
                     QAQSERNIEDQRRSVFEGERERFGQQDLYKTMDNQGYTNNVDRLTARCMEARGWAPKQ
                     QTGLSGLSSWWNRNSTFNTPLGK"
     gene            complement(3666..>3908)
                     /locus_tag="VF991_13575"
     CDS             complement(3666..>3908)
                     /locus_tag="VF991_13575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007800246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HEX9557524.1"
                     /translation="LGSGVVALIGVEDGKASAVVGVTDDLSKNFSAVELVKAGVAALG
                     GKGGGGRPDMAQGGGPDAAKAAEALKAIEAALAAVK"
BASE COUNT          568 a         1357 c         1275 g          708 t
ORIGIN      
        1 atcgcagcac cgggcggcta tcgagtcacc ggcgaatggc acttctcctc gggctaccgc
       61 caggccaact ggatcggcgc gcacgcccac gtcgtcgaac ccgacggctc gctgcggctc
      121 aaccgcttcg gccggccgac cgtgcgtacc ctgctgatgc ccaaggccag gacgacgccg
      181 atccacgact ggcatacgct cggcatgcgc ggcaccgcct cggagggtta ttcgatcaag
      241 gacgtgttcg tgcccgaagc cttctccggc acgcgcgagg atccgagcct gcgccgcgac
      301 cgcggcccgc tctacgcctt caccacccag ggcctctatg ccaccggcgt cgccggcgtg
      361 gcgctcggcc tggcgcgcgc catgctcgac gccttcatcg agctggcgct cgagaaggcg
      421 ccgcgcaatc tcgggcggct ggccgacagc cccgtggtgc agtccgacat cgcccgccgc
      481 gaggccgatc tcggcgcggc gcgcgctttc ctggtcgaaa tcctgaagga gatctggcag
      541 cgcgccgacg atatcgagcc gatcggcacc gccgagcgcg cgcggctgcg gctcggctgc
      601 acccaggcca tccacgtggc ggagaagacc gccgactggg tctacaaggc ggccggcacc
      661 tcggcgattt tcatcggcac gccgttcgag cgccgcttcc gcgacatgca cacgctctcc
      721 cagcagatcc aatcacgcga ggcgcatttt gagacggtcg gccggatcat gctgaacggc
      781 gatcccgacg ggacattcct gggctgaggc tgggcgcgcg cgactcctca ggcgaagtaa
      841 ccttcgcctt gtgtcgcgcg tcttgtgctc gctccaacga tgatcgcgcc actggagtgg
      901 cgcgccccca gcgaatctat ttcggttcga tgcgcttgga cgccagcacg gcggcctggc
      961 cctggtcggg cgggacctcg gcgatctcgc agcccggcgt ccaccagccg accttcaccg
     1021 acacttcgac aaagcgcgtc tggccgtcct ggatctcgac ctggcgcgcc gtggtcttgt
     1081 cgccgatctt gcagtcgatc tcgaccgggc cgggcggtcc ttccagacga acgtaggtgt
     1141 tcgagccgag ctgggcgttg gcgccaccga cgatggcgac gtcgatcgtc gtggtcagcg
     1201 ccatccagcc cgggcgatag atgtaaagcg cgcccttgtc gggcgccggc cggtcgaagc
     1261 gcttggcgtc ctggtcggcc ggctgcggcg ccaccggccc gctggcgcag gcgcccacga
     1321 tcaccagggg cagcagctgc aacccaatcg acaggcggcg agctcggatc acggatgtct
     1381 ccttgcgttg ggtcagttgg ttaaacgaag gagcagtggc gatgttcctt cacggcgtcg
     1441 gcgtggtaat caacgtcacc gagcggcatc ccctgccctg ccatcggtag ttttgcgtgg
     1501 cgcccttgct caccgtccat tcgacgatgc aaccctcgcg cacgaaagag ggcgggaagc
     1561 cgcccatcgg catccagctc cggccgaccc gcgtgtacat cggcggcatg ccggggctca
     1621 tataggacgt gtcccagcgc cactgcagga tcttggtttc ctcgtcgagc tgatagctgt
     1681 tgtcaggaat gcggcccatg acgccgagca ggtcgcgttc gttggtgccg gccatctcgc
     1741 gcagcctcat gtcgaattcc gcattggtct gaccgcagcc ggcaagcagc agcggcaaca
     1801 ggaccaggct ggccagaaca cgacgcatgc aacactccgg cacgacgcga cgggcaacgc
     1861 agcaaggctg cgccgcgttg cccgcgccgg tcaagttaca tcaaagtgtt ggacttgccg
     1921 tccggaccga cgatgatttc ggatcggcaa cggaaatggc cccgtaggaa gatcttggtg
     1981 acgacaagct tgcggtggct ggttttcgtg acgtgtgcgg ctctgctcgt gctgggaccg
     2041 ttcaaccgtg ccttcaagga cgctgagcgc tacggctatc tgacagacat catgccgggg
     2101 gactggggcg ccaccaacat atggctcgac agcaccggct gtgccgtcga ccgcggcgtc
     2161 tggctggccc tctgcgagaa cggcaagctg gtgccgatat cggagcgcgc catcgccgac
     2221 gatcccggcc acgccctgct gctcgacctg tggtcgctgg cgaccggcaa gcgcgccacc
     2281 ttgcccgacg tggcgcggct caacaccctg gtggacacga tcggcctgtt ggcgctcgcc
     2341 ggcctgctgt tcgcgctgcg cgcctggctc accgcgatcg tactgatggc attggggccg
     2401 gtcgagtatc tcggctggat ggccacctcg ccgcactgga gcttcatcgg cgtggccagt
     2461 ctgggcgccg tgctacccat ggctctcgcg ggccgtgagc tcggtctgct gtcccgccgc
     2521 ggcggtgccc tgtggatcgc ggccgggctg gtgttcctcg ccctggcaac gctgatccgc
     2581 gaaccgatcg gcatcatggg cgtgctgctg agcctcggcg ccgccgccgt gctgctggtg
     2641 cgccggccca agcgcattgc cgggctggcg ctggtaagcg tgctggcact ggccgccttc
     2701 accacgccac ggtgggtcgt cgccgcgcgc gatgccgcct tcgacatgca gccggcccag
     2761 cggctcgcca ggcatggcat ttcccacacg ctctatatcg gcctgggatt cgtcgagaac
     2821 aaatggggca tccgctacga agatgcctac ggcgaggaaa ccgccagcaa ggcccagccg
     2881 cccctcgtct tcgcctcgcc cgaatatttc cggctggcgg gacagctcta tttcgcgcgc
     2941 tgggccgagg atccgatcga ggtgagccgg atctatttcg agaaggcgtg gatgttgctc
     3001 ggccggccga cgctctatcc cgggccgcct ttcggcatcg ttctgctgat cgggctgatc
     3061 catttcctgg ccgcgacggc gctcggcgcc tggcgacgca tcggcttcat gcagggcctg
     3121 gtgatcgagg ccgtggcggt gggttttctg ctgctgttcc ttgcccaggc gatggcggca
     3181 ttgcccagcc acaactatgt catgccggtc aacgccttcg tggtggtgct gctgggcgcg
     3241 atcgtcgagt tcctcgttcg cgccctgctg cggatcaggc cggcatggtg attatttgcc
     3301 gagcggggtg ttgaaggtgc tgttgcggtt ccaccacgaa ctcaagccac tcaggcctgt
     3361 ctgctgcttg ggcgcccagc cgcgcgcctc catgcaccgc gccgtcaagc ggtcgacgtt
     3421 gtttgtgtag ccctggttgt ccatggtctt gtagaggtcc tgctggccga agcgctcgcg
     3481 ctcgccttcg aacaccgagc ggcgctggtc ctcgatattg cgctcgctct gggcctgggc
     3541 gcgcacctgg gcacggcact gcgcttcgtc cttgatcatc tggtcggcgt ccttgccctg
     3601 catggtgtag ctcttgggcg cgcaggcgcc ggccagcgtc gcgagggcga gcagaattgc
     3661 gatcctcatt tcactgccgc cagtgccgcc tcgatcgcct tcagcgcctc ggcggccttg
     3721 gctgcatcgg ggccgccgcc ctgcgccatg tccggccgtc caccgccgcc cttgccgccc
     3781 agagcggcca cgcccgcctt caccagctcg acggcactga aattcttgga aagatcgtcg
     3841 gtgacgccga ccaccgccga tgccttgcca tcctccacac cgatcaatgc gaccacgcct
     3901 gagcccag
//
LOCUS       DASWGA010000573         1816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1833228, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000573 DASWGA010000000
VERSION     DASWGA010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1833228"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..571)
                     /locus_tag="VF991_13580"
     CDS             complement(8..571)
                     /locus_tag="VF991_13580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEX9557525.1"
                     /translation="MSDPSRLVVGISGASGVIYGVRLLQALKDLPVETHLVMTRTAEI
                     TLGHETKIKVAEVRRLADTTYGIDDLAAAISSGSFRTMGMIVAPCSMRSLGEIANGIT
                     SNLLTRAADVVLKERRRLVLLARETPLHAIHLRNMTRLAEMGAIIAPPVPAFYNQPQT
                     LDDVIDHTVGRVLDLFDLDTGKVKRWS"
     gene            684..863
                     /locus_tag="VF991_13585"
     CDS             684..863
                     /locus_tag="VF991_13585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014765888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEX9557526.1"
                     /translation="MSTVDHIEALKAKHASLEQAIHQENTRPHPDDDAICSLKKRKLQ
                     IKDEIVRLTSSSTTH"
     gene            complement(1028..>1816)
                     /locus_tag="VF991_13590"
     CDS             complement(1028..>1816)
                     /locus_tag="VF991_13590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557527.1"
                     /translation="TRPPSTIIPWGRTLLAALPLLLLLLAGAWLLRGCLPAEPDMALA
                     TREGPPAAAAPEPAPDPMPALKAAFSTEESRSRVLKVELSLIEAELKKRIADCKPPEA
                     PKPPPQVALAPQPQPPPAPKPAPAPTPPPQQSRPTDDRLRLPSAPTNNYSFLSGCWRT
                     DPFRHETIQMQPGISSYCFDANGNGQLEWRRGRTACRTRAQARFEGAILRLRDGDTTC
                     NDGSHWYADQLVCRRGADDVAQCSGSSRGAFGPVSWTVNLHKLN"
BASE COUNT          303 a          570 c          649 g          294 t
ORIGIN      
        1 tcggcatcta gctccagcgt ttcaccttgc cggtgtcgag atcgaacagg tcgagcacgc
       61 ggccgacggt gtggtcgatc acgtcatcga gcgtctgggg ctggttgtag aaagcgggca
      121 ccggcggcgc gatgatggcg cccatttcgg cgagcctggt catgttccgg agatggatgg
      181 catgcagtgg cgtctcgcgc gccagcagca ccagccggcg gcgctccttc aacaccacgt
      241 cggcggcccg cgtcagcagg ttggaggtga tgccgttggc gatctcgccc aggctgcgca
      301 tcgaacaggg cgccacgatc atgcccatgg tccggaacga gccgctggaa atggccgcgg
      361 cgagatcgtc gatgccatag gtggtgtcgg cgaggcggcg cacttccgcc acctttatct
      421 tcgtctcgtg gccgagggtt atttccgcgg tgcgcgtcat taccaggtgg gtttccaccg
      481 gcaaatcctt tagcgcctgc agcaggcgta caccgtagat caccccggaa gccccggaaa
      541 taccgacaac aagccgcgat gggtcagaca tgcggactat cttatcggct tatgcacagg
      601 cggtggatag ggcttgattc aacgtgactc atcccgatct tggagtcaca atttcttgtc
      661 cgcaaccagc tcggaggtcg cccgtgagca cagtggacca catcgaagcg ctcaaggcca
      721 agcacgcttc ccttgagcaa gcgatccacc aagagaatac ccgaccgcat cctgacgacg
      781 atgcgatctg cagcctcaag aagcgaaaac tgcaaatcaa ggacgagatt gtccgtctga
      841 cgtcgtcgag tacgacccac tagtcaaagc cagcgcgatc gggccagcgc gaccgcggcg
      901 acggcggcga acaggccggg tgtgaatccg ccggctgttc gcgtgtcgac tgccgcggca
      961 gcgcacccac gactgccacg gccagcgcgc ctcgatagag gctcagcgtg gacccgatcc
     1021 gcgcgagtca gttcagcttg tgcaggttga ccgtccagga gaccgggccg aaggcgccgc
     1081 gcgatgagcc gctgcactgt gccacatcgt ccgcaccacg acggcagacg agctggtcgg
     1141 cataccagtg cgagccgtcg ttgcaggtcg tgtcgccgtc gcgcaggcgc aggatcgcgc
     1201 cctcgaagcg cgcctgggcg cgcgtgcggc aggcggtgcg gccgcgccgc cattcgagct
     1261 ggccgttgcc gttggcgtcg aagcagtagg acgagatgcc gggctgcatc tggatggtct
     1321 cgtggcggaa cggatcggtg cgccagcagc ccgacaggaa ggaatagttg ttggtcggcg
     1381 cggatggcag acgcaggcga tcgtcggtgg gccggctttg ctggggcggc ggcgtcggcg
     1441 ccggcgcggg cttgggcgct ggcggcggtt gcggttgcgg cgcgagggcg acctgcggcg
     1501 gcggcttggg ggcttccggc ggcttgcagt cggcgatgcg cttcttgagc tcggcctcga
     1561 tcagcgacag ctcgaccttg agcacgcggc tgcgcgattc ctcggtcgag aaggcggcct
     1621 tcagcgccgg catcggatcg ggcgcgggtt ccggcgccgc cgcggccggc ggcccctcgc
     1681 gggtggcgag tgccatatcg ggctcggccg gcaggcagcc gcgtagcagc caggcgccgg
     1741 ccagcagcag gagcagcagc ggcaacgccg cgagcagcgt gcgcccccaa ggaatgatgg
     1801 tgctgggcgg tcgggt
//
LOCUS       DASWGA010000574         2351 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1326519, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000574 DASWGA010000000
VERSION     DASWGA010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1326519"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..887)
                     /locus_tag="VF991_13595"
     CDS             complement(<1..887)
                     /locus_tag="VF991_13595"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9557528.1"
                     /translation="MRLNTGGTGSRQARNARRPRQLRKLALAGVFLLAACGQSETDRE
                     SDRATQAANPAGLSPGRVGLSRVVAAGSSFAAVAADESRAAEIGRDILLSGGNATDAA
                     TAMYFALAVTLPSAAGLGASGACIVHDDKTKTAEAFVFPPIAAPGAIAGQSFAVPSSV
                     RGITLMHIRHGQLRWEQTIAPAERLARFGVPVSRALSRDLQAGASLVGADREMRRIFA
                     KATGGTVTEGDSWVQTDLAGTLGVIRQRGGGEFFQGALARTLSEQVSQMGGSLPLEAL
                     RNAVPKAGPPVSEGFGTFAR"
     gene            874..2247
                     /locus_tag="VF991_13600"
     CDS             874..2247
                     /locus_tag="VF991_13600"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEX9557529.1"
                     /translation="MFKRITTLFCLALFALAPLRAASAQQGQRLNLIRDAEIENDIRT
                     MVVPIWKAAGLDPNAVEIMIVQDNTLNAFVAGGQRIFINTGLIMRTETPNQLIGVLAH
                     ESGHIAGGHLARMQEELRSLTTLQILEMILAGGAMAGAATSGGSAGRGGPATGAGTTN
                     APGSLLSFLKYTQTQEHSADQAGITFLQRTGQSPKGTVEFLRVLQKEERLQLNRRDPY
                     LSTHPLTPERIASFEEAVARSPYANTPDSPEFLAMHHRIVAKLMGFITPDVALQRFAE
                     ADRSVPARYARSIAWYRKAALGSALLGIDGLLKEYPNDPYFHEVRGQMLYENGRANEA
                     IASYRRAVQLLPGAAVIKIDFARALLETDKPDNDREAVRNLELAMQQEAGTFDLWRLM
                     AAGYAKLNNPGMTSLARAEMAVLRGQRAEAQAHADAASRQLQSGTPAWQRAQDIKAYI
                     NTRPGRR"
BASE COUNT          391 a          861 c          764 g          335 t
ORIGIN      
        1 cgggcaaagg tgccgaagcc ttcggagacc ggcggtccgg ctttcggcac cgcgttgcgc
       61 agcgcctcga gcggcaggct gccgcccatc tgcgagacct gctcggacaa ggtgcgtgcc
      121 agcgcgccct ggaagaactc gccgccgccg cgctggcgga tcacgcccag cgtgccggcg
      181 agatcggtct gcacccagct gtcgccctcg gtcacggtgc cgcccgttgc cttggcgaaa
      241 atgcgccgca tctcgcgatc ggctccgacg agcgacgcgc cggcctgcag gtcgcgcgac
      301 agcgcacgcg acaccggcac gccgaaacgc gccagccgct cggccggcgc gatggtctgc
      361 tcccagcgca actggccgtg acggatatgc atcaaggtga tgccgcgcac gctcgagggc
      421 acggcgaagg actggccggc gatcgcgccc ggcgcggcga tcggcgggaa cacgaaggcc
      481 tcggcggtct tggtcttgtc gtcgtgcacg atgcaggcgc ccgatgcgcc aagccccgcc
      541 gccgacggca aggtcaccgc gagtgcaaag tacatggcgg tcgccgcatc ggtggcgttg
      601 ccgccgctca gcaggatgtc gcgcccgatc tcggcggcgc ggctttcgtc ggccgccacg
      661 gcggcgaacg acgagcccgc ggcgacgacg cgcgacaggc caactcgacc cggcgacagg
      721 ccggccggat tggcggcctg ggtggcgcga tcgctctcgc ggtccgtctc actttggcca
      781 caagccgcca gcaaaaacac gccggccagc gccagcttgc gcaattgacg cggccgacgc
      841 gcgtttctag cctgccgaga ccccgtgccg cccgtgttca aacgcattac caccctcttc
      901 tgtctcgcgc tgttcgcgct ggcgccgctt cgtgccgcga gcgcgcagca aggtcaacgg
      961 ctcaatctca tccgcgacgc cgaaatcgag aacgacatcc gcaccatggt ggtgccgatc
     1021 tggaaggccg ccggtctcga tcccaacgcc gtcgagatca tgatcgtcca ggacaacacg
     1081 ctcaacgctt tcgtggccgg cggccagcgc atcttcatca acaccggcct gatcatgcgc
     1141 accgagacgc cgaatcagct gatcggcgtg ctggcgcacg aaagcggcca catcgccggc
     1201 ggccatctgg cgcgcatgca ggaggagctg cgcagcctca ccacgctgca gatcctcgag
     1261 atgatcctgg ccggcggcgc catggcggga gccgccacct cgggcggcag cgccggccga
     1321 ggcggcccgg caacgggcgc cggcaccaca aatgctcccg gttcgctgct gtcgttcctg
     1381 aaatacacgc agacccagga gcactcggcg gaccaggcgg gcataacctt tctgcagcgc
     1441 accggccagt cgcccaaggg cacggtcgaa ttcctgcgcg tgctgcagaa ggaagagcgc
     1501 ctgcagctca accggcgcga tccttacctt tcgacccatc cgctcacgcc ggagcgcatc
     1561 gcgtcgttcg aggaggcagt ggcgcgctcg ccctacgcca acacgcccga ttcgccggaa
     1621 ttcctggcga tgcatcaccg catcgtcgcc aagctgatgg gcttcatcac gcccgatgtc
     1681 gccctgcagc gtttcgccga agccgaccgc tcggtgccgg cgcgctacgc gcggtcgatc
     1741 gcctggtacc gcaaggcggc gctgggatcg gcactgctcg gcatcgatgg gctgctcaag
     1801 gaatacccca acgaccccta cttccacgaa gtgcgcggcc agatgctgta tgaaaacggc
     1861 cgcgccaacg aggccatcgc ctcctaccgg cgcgccgtcc agctgctgcc gggcgccgcc
     1921 gtgataaaga tcgactttgc ccgcgccctg ctcgagaccg acaagccgga caacgaccgc
     1981 gaagcggtgc gcaatctgga actggccatg cagcaggagg cgggcacctt cgacctgtgg
     2041 cggctgatgg cggcgggcta tgccaagctc aacaaccccg gcatgacctc gctggcgcgc
     2101 gccgagatgg cggtgctgcg cggccagcgc gccgaggcgc aggctcatgc cgacgctgct
     2161 tcacgccagt tgcaatccgg cacgccggcc tggcagcgcg cccaggacat caaggcctat
     2221 atcaacacgc ggccaggccg gcgataatcc ggcagccctg gagatcagca catgcgttgg
     2281 acccttctcg tcatctctgc cgccctcgtc gtcgccggcg ccttcgtcgc cgggcgggtc
     2341 accacgcctt c
//
LOCUS       DASWGA010000575         3452 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2341969, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000575 DASWGA010000000
VERSION     DASWGA010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3452
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2341969"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..1781
                     /locus_tag="VF991_13605"
     CDS             207..1781
                     /locus_tag="VF991_13605"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557530.1"
                     /translation="MRNILNGVAALLGMVGASSMAEAETTLRMMKSLDAPHYDGQRTT
                     WSPTSDIVNMIQDTLVALDWDGKTALPYLAKSWTISPDGKLYTFKLRDDVSFCSGKKF
                     TAEDVVYSFNRLKDPETRAPYAWRAGNIKDLRATDPYTVEYELAEPFSELLLQLTMFT
                     NAIHNKENVEALGKDYGIKGVDGTGPWCFVSWQPRTEIVLKRHDAYKWGPSMYQNKGP
                     VKFDKLSIKIVPEDSSRVAAMLGGQFDFTNQFPLQFLQQAQAAPMLTVQEAKPNFQLA
                     YYGFKITRPMVSDRRVRQAMSIAINRAEIAKGIFFGNADPAYTFVDPAAPDFAPATKG
                     VVEEDIELAKKLLDDAGWKLGADGIREKDGMKLAPKVYYVQVANFGRTSEAIQGYLRK
                     IGVDWRLQPFDSTIAPAKMAEQDYEIWTVAVPYLSAGELMNLYFDSKNIPTPNRMNWK
                     DPETDEWLRLGRAALTDADRTKYYMLVQKKVADEHLWIPVINAGMYLVANKKLKGVRP
                     HMLYQNTFYKGLDYSY"
     gene            1781..2767
                     /locus_tag="VF991_13610"
     CDS             1781..2767
                     /locus_tag="VF991_13610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557531.1"
                     /translation="MDKLLDVRGLKTHFHTDRGLFRAVDGIDFSVGRGKTVGLVGESG
                     CGKSVTSLSVMGLVASPPGEVEAEAVLFEGRNVLGLSADERRRLRGSKMSMIFQEPMT
                     SLNPVHTIGQQIVEAILAHTDVSPQAAKKRAIEMLELVRIPSAIQRIDDYPHRLSGGM
                     RQRVMIAMALSCEPALLIADEPTTALDVTIQAQILDLLQDLQRRLGMAVLIITHDLGV
                     IAEVADDVLVMYAGKIVESASVDALFADPQHPYTIGLLGSIPRLDIERERLATIEGTV
                     PSPNRQPKGCRFSPRCPFADRRCHEEPPPLRDIGAGHRVACWKAPVEGAVAA"
     gene            2764..>3452
                     /locus_tag="VF991_13615"
     CDS             2764..>3452
                     /locus_tag="VF991_13615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9557532.1"
                     /translation="MSEIAPVLQVDRLVKHFPVSRGLIRRKVIGMVRAVEGVSFEIAR
                     GETLALVGESGCGKSTTGRLVLRLMDPTEGSVRFKGEEIANLDKNALRRLRRHMQIIF
                     QDPYASLNPRMTVGEILAEPMAVHDLHTEAERETRVGELLDVVGLLPEQARRYPHQCS
                     GGQRQRTGIARALAVNPDLIVCDEPVSALDVSIQAQIVNLLQNLQRRFGLSYLFIAHD
                     LAVVKHISDRVA"
BASE COUNT          644 a         1165 c         1072 g          571 t
ORIGIN      
        1 tgccggtgct caacatcagc ctttatctgg tgaccagcaa gaagctcaag ggtgcgcggc
       61 cgcacatgct ttatgccaac accttctaca aggggctgga tttgagtttt tgaagtctct
      121 tccggacgcg actcaaattc ctctcccccg ctagggggag aggagcctga tgcgaagctg
      181 gggagaacca acaagaggga acgacgatgc gcaacatctt gaacggcgtg gcggcgttgc
      241 tgggcatggt cggggcatcg tcgatggccg aggccgagac caccctacgc atgatgaagt
      301 cgctcgatgc gccgcactac gacggccagc gcacgacctg gtcgccgact tccgacatcg
      361 tcaacatgat ccaggacacg ttggtggcgc tcgactggga cggcaagacg gcgctcccct
      421 atctcgccaa gtcgtggacc atcagccccg acggcaagct ttacaccttc aagctgcgcg
      481 acgacgtgag cttctgcagc ggcaagaagt tcaccgcgga ggacgtggtc tacagcttca
      541 atcggctgaa ggatcctgaa acgcgcgcgc cctatgcctg gcgcgccggc aacatcaagg
      601 atctgcgcgc caccgatccc tacaccgtcg agtacgagct cgccgagccc ttctccgagc
      661 tcctgctgca gctcaccatg ttcaccaacg cgatccacaa caaagagaac gtggaggcgc
      721 tgggcaagga ctacggcatc aagggcgtcg acggcaccgg accatggtgc ttcgtctcct
      781 ggcagccgcg caccgagatc gtgctcaagc gccacgacgc ctacaagtgg ggtccctcga
      841 tgtaccagaa caaggggccg gtgaagttcg acaagctgtc aatcaagatc gtgccggagg
      901 actccagccg cgtcgccgcc atgctgggtg gccagttcga tttcaccaac cagttcccgc
      961 tgcaattcct ccaacaggcg caagccgcgc cgatgctcac cgtacaagag gccaagccga
     1021 actttcagct ggcgtattac ggcttcaaga tcacccggcc catggtgtcc gaccgccggg
     1081 ttcgccaggc gatgagcatc gccatcaacc gcgccgagat cgccaagggc atattcttcg
     1141 gcaatgccga tccggcctac accttcgtcg atcccgcggc accggacttc gcccccgcga
     1201 ccaagggcgt ggtggaggag gatatcgaac tggccaagaa gctgctcgac gacgccggct
     1261 ggaagctggg cgccgacggc atccgcgaga aagacggcat gaagctggcg cccaaagtgt
     1321 actacgtcca ggtcgccaat ttcggcagaa cctccgaggc gatccagggc tacctccgca
     1381 agatcggcgt cgattggcgc ctgcaaccct tcgattcgac catcgccccg gcgaagatgg
     1441 ccgagcagga ctacgagatc tggaccgtgg ccgtgcctta cctctctgcc ggcgagctga
     1501 tgaatctcta tttcgattcg aagaacatcc cgactcccaa ccggatgaat tggaaagatc
     1561 cggagaccga cgagtggctc cggctcggcc gcgccgcgct gaccgatgcc gaccgcacga
     1621 aatactacat gctggtgcag aagaaggtgg ccgacgagca tctgtggatc ccggtcatca
     1681 acgccggcat gtacctcgtc gccaacaaga agctgaaggg tgtccgcccg cacatgctct
     1741 accagaacac cttctacaag gggctggact actcctactg atggacaagc ttttagacgt
     1801 ccgcggtctc aaaacccatt tccacaccga ccgcgggctg ttccgcgccg tcgacggcat
     1861 cgatttctcc gtcggccgcg gcaagaccgt gggcctggtg ggcgaatcgg gctgcggcaa
     1921 gagcgtgacg tctctttcgg tgatgggcct ggtggcgagc ccgcccggcg aggtcgaggc
     1981 ggaggccgtg ctgttcgagg gccgcaacgt gctcggcctc tcggccgacg agcgccgccg
     2041 cctgcgcggc agcaagatgt cgatgatctt ccaggagccg atgacctcgc tcaatccggt
     2101 ccacacgatc ggccagcaga tcgtcgaggc gatcctggcg cacaccgatg tttcgccgca
     2161 ggcggcgaag aagcgcgcca tcgagatgct cgagctggtg cgcatcccct cggccatcca
     2221 gcggatcgac gattatccgc accgcctgtc gggcggcatg cgccagcggg tgatgatcgc
     2281 catggcgctg agctgcgagc ccgcgctgct gatcgccgac gagccgacca cggcgctcga
     2341 cgtcaccatc caggcgcaga tcctcgacct gctgcaggac ctgcagcggc ggctcggcat
     2401 ggccgtcctg atcatcaccc atgatctcgg cgtcatcgcc gaggtcgccg acgacgtgct
     2461 ggtgatgtac gccggcaaga tcgtcgaatc agcatcggtt gacgccctgt tcgccgaccc
     2521 gcagcatccc tacacgatcg ggcttttggg ctcgatcccg cgcctcgaca tcgagcgcga
     2581 gcggctggcc accatcgagg gcacggtgcc cagccccaac cgccagccca agggctgccg
     2641 cttctcgccg cgctgcccct tcgccgaccg gcgttgccac gaggagccgc cgcccttgcg
     2701 cgacatcggc gccggccacc gcgtcgcctg ctggaaggcg cccgtcgaag gcgcggttgc
     2761 ggcatgagcg aaatcgcgcc cgtgctgcag gtcgaccggc tggtcaagca tttcccggtc
     2821 agccgtggcc tgatccgccg caaggtgatc ggcatggtgc gcgccgtcga aggcgttagc
     2881 ttcgagatcg cgcgcggcga gaccctggcg ctggtgggtg aatcgggctg cggtaagtcg
     2941 accaccggcc ggctggtgct gcggctgatg gacccgacgg aaggctcggt gcgcttcaag
     3001 ggcgaggaga tcgccaacct cgacaagaac gcgctgcgcc ggctgcgccg ccacatgcag
     3061 atcatcttcc aggaccccta cgcctcgctc aatccgcgca tgacggtggg cgaaatcctc
     3121 gccgagccga tggcggtgca tgacttgcac accgaagccg agcgcgagac ccgcgtcggc
     3181 gagcttttgg acgtggtcgg cctgctgccc gagcaggcgc gccgctatcc gcaccagtgc
     3241 tccggcggcc agcgccagcg caccggcatc gcccgcgcgc tggcggtcaa tcccgacctg
     3301 atcgtgtgcg acgagccggt ctccgctttg gacgtctcga tccaggcgca gatcgtcaac
     3361 ctgctgcaga acctgcagcg ccgtttcggc ctctcctatc tgttcatcgc ccacgacctc
     3421 gccgtggtga agcacatcag cgaccgcgtg gc
//
LOCUS       DASWGA010000576         3518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2342221, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000576 DASWGA010000000
VERSION     DASWGA010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3518
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2342221"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..780)
                     /locus_tag="VF991_13620"
     CDS             complement(166..780)
                     /locus_tag="VF991_13620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9557533.1"
                     /translation="MSKATLQRRPLVKKILEGADDNLLVIAGLGSSNWDITEAGDRPL
                     NMPLWGAMGAPVGMGLGLALAQPRKRVLVITGDGDMLMSLGSLATVATQQPDNLAIVV
                     LDNEKFGETGNQATHTSPRNNGPTDSGAGTDLSLIAKGCGIADVGIVREAGEVAQLVK
                     DARARKGPVFRVVKVMVEKLDFVMPPQDGAHLKDRFRAALLGSA"
     gene            complement(781..1311)
                     /locus_tag="VF991_13625"
     CDS             complement(781..1311)
                     /locus_tag="VF991_13625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX9557534.1"
                     /translation="MNAETSADWRDQIFDVLQTHDIRQVYHVPDAGHSRLIEHCQRSN
                     AIRTVALTTEEEGIALAAGAWLGGQRSVLLMQSSGVGNTINLMGLTKTLRFPFLTLIT
                     MRGEWGEFNSWQYPMGQGTPKVLDAMGVLLYPVDKADEVKATVDAAARAAFNGGQAVA
                     VLLRQKLVGIKDFGKK"
     gene            complement(1373..3208)
                     /locus_tag="VF991_13630"
     CDS             complement(1373..3208)
                     /locus_tag="VF991_13630"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9557535.1"
                     /translation="MTLVLSTHGFAQSLTTPDPVGAGFSPERLARIAPWYQSQIDTGA
                     LPGAVVAIARDGKLAYLQAIGTYDRAGKIPLKPDAIFWIASMTKPVTSVAAMMLVEEG
                     KLDLTAPVGQYLPELKDMRVGLERAPAKRPMQVNDLLRHTSGLTYPQEGTDELHRTYN
                     GVRTFRRDRTLADFVTDLAAMPLVHQPGEAWEYSWGVDVLARVVEVVSGQSFDQFLES
                     RIFKPLRMVDTGFFVPESKLSRLVDPIATGWWPLWDVTKPTKLFAGGAGLVSTAPDYL
                     RFCQMLLNGGELDGVHILSAKTVQQMTANTLPAEMRFAGVVGQFVGPRVGTGWGLGFA
                     VRTNPEFSLVPGAVGSFNWSGIWGQYFWIDPVEQLIGVQMIQVPMDAGAPYRDALRHL
                     TYAALSVPGSDVSPAPAAVNVNILETYEGTYDFGASLSSRDKQAPIPAFAFAGVGLEL
                     ALVDDKVIVRRPIEGGPSLRAGVKAGDVVAEIDGAPLKGLNINQVLDKLRGRAGTQVA
                     FKIARQDQDLIDVAIVREPIRLPGARIQVRVEGGKLVIAATGRWSVLDFEKDKPVPVE
                     ATSSTEFRIEGGNHTRLAFVSDSTGKVTGVVLNPGPWEIRAAKIN"
     gene            complement(3244..>3518)
                     /locus_tag="VF991_13635"
     CDS             complement(3244..>3518)
                     /locus_tag="VF991_13635"
                     /inference="COORDINATES: protein motif:HMM:NF015608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEX9557536.1"
                     /translation="LRGIMNPAMVLAWILGLLLAWQGDWWHAGWWQAKFALVIALTFV
                     HHLYGRWRKTFEADRNIRPARYYRWWNEVPTVLMIVIVFLAVLKPF"
BASE COUNT          617 a         1144 c         1135 g          622 t
ORIGIN      
        1 cggcgcgacg ttccagctcc ttccagtcga cgccgttctt caggagcgat tcggcgtaca
       61 tcctggcgcc gcggcgcagg cgatcggccg cggccttgcc gtggatgcgg ccgcgctcgc
      121 gcgggctgcc tgaaaggtcg atcagaggaa acggtgcgta gtccatcagg cactccccag
      181 caaagcggcg cggaaacgat cttttagatg cgcgccatcc tgcggcggca tgacgaagtc
      241 gagcttttca accatcacct tcacgacccg gaagaccggg cccttcctgg cgcgcgcatc
      301 cttgacgagc tgggcgacct cgcccgcctc gcgcacgatt ccgacatcgg cgatgccgca
      361 gcccttggcg ataaggctca agtcggtgcc ggcgcccgag tcggtcgggc cgttgttgcg
      421 cgggctggtg tgggtggcct ggttgccggt ctcgccgaac ttctcgttgt cgagcacgac
      481 gatggcgagg ttgtcgggct gctgggtcgc cacggtggcg agcgagccca ggctcatcag
      541 catgtcgcca tcgccggtga tcaccagcac gcgcttgcgc ggctgcgcca aggcgagacc
      601 gagacccatg ccgaccggcg cgcccatggc gccccacagc ggcatgttga gcggccgatc
      661 gcccgcctcg gtgatgtccc agttggacga gccgaggccc gcgatcacca gcaggttgtc
      721 gtcggcgccc tcgagaattt ttttgaccag cgggcggcgc tgcaaggtgg ccttgctcat
      781 ttacttcttc ccgaaatctt ttatgccgac caacttctgg cgcagcagga cggcgaccgc
      841 ctggccgccg ttgaaggcgg cgcgggccgc ggcgtcgacc gtggccttga cctcgtcggc
      901 cttgtcgacc gggtagagca gcacgcccat ggcgtcgagc accttgggcg tgccctggcc
      961 catcggatac tgccaggaat tgaactcgcc ccactcgccg cgcatggtga tcagggtcag
     1021 gaacggaaag cgcagggtct tggtgagacc catcaggttg atggtgttgc ccacgcccga
     1081 gctctgcatc agcaaaaccg agcgctggcc gcccagccag gcgccggcgg cgagcgcgat
     1141 gccttcctcc tcggtggtga gcgccacggt gcggatggcg ttggaccgct ggcaatgctc
     1201 gatcagccgc gagtggccgg cgtcgggcac gtgatagacc tgcctgatgt cgtgcgtctg
     1261 cagcacgtcg aaaatctggt cgcgccagtc ggcgctcgtc tcggcgttca tgtccctctc
     1321 gtcgaaaagg cttcggccgc agaggatagc gtctgtgcct tccgcccggt cactaattta
     1381 tctttgccgc cctgatttcc cagggccctg gattgagcac gacgccggtg accttgccag
     1441 tcgagtcgct cacaaatgca aggcgcgtgt gattgccgcc ctcaatgcga aattccgtac
     1501 tcgacgtagc ttccacagga acgggtttgt ctttctcgaa gtcgagaacc gaccaccgcc
     1561 ccgttgcggc gatgacaagc ttgccgccct cgacccgcac ctgaattcga gcgccgggca
     1621 ggcggatggg ctcgcgcacg atcgcgacgt cgatcaagtc ctgatcctgg cgcgcgatct
     1681 tgaacgcgac ctgcgtgccg gcgcggccgc gcagcttgtc gagcacctgg ttgatgttga
     1741 gacccttgag gggcgcaccg tcgatctcgg cgacaacgtc gcccgctttc acgccggccc
     1801 tgagcgaagg cccgccctcg ataggtcggc ggacgatgac cttgtcgtcg accagggcta
     1861 gttcgaggcc aacgccggca aaggcgaacg cgggaatcgg cgcctgcttg tcgcgcgaac
     1921 tgagcgacgc cccgaaatcg taggtcccct cataggtctc aaggatattg acgttcacgg
     1981 cggcgggcgc cggcgatacg tcggatcctg gaacgctgag ggcagcatag gtcagatgcc
     2041 gtagggcgtc ccggtaaggc gctccggcgt ccatcgggac ctggatcatc tgcaccccga
     2101 tcagctgctc gaccggatcg atccagaagt attggcccca gatgccgctc cagttgaagc
     2161 tgccgacggc gcctggaaca aggctgaatt cggggttggt gcgcacggca aagccaagtc
     2221 cccatcctgt gcccactctc ggcccaacga actggccgac gacgccagca aagcgcatct
     2281 ccgccggcag cgtattcgcc gtcatctgct gcacggtctt tgccgagaga atatgcacgc
     2341 catcgagctc gccgccattc agcagcatct gacagaagcg cagataatcg ggcgccgtcg
     2401 agaccagacc ggcgccgccg gcgaacagct tcgttggctt ggtcacgtcc cagagcggcc
     2461 accacccagt ggcgatcggg tcgaccaggc gcgatagttt cgactcgggc acgaaaaagc
     2521 cagtgtcgac catgcgcaac ggcttgaaga tccggctctc caggaactga tcgaacgatt
     2581 ggcccgagac gacctcgacg acgcgggcca gcacgtcgac tccccaacta tattcccagg
     2641 cctcgccggg ctggtggaca agcggcattg cagcgaggtc ggtcacgaag tcggcaaggg
     2701 tcctgtcacg tctgaacgtc cttacgccat tgtaagtcct gtgcagttcg tcggtgccct
     2761 cttgaggata ggtcaggccg gaggtgtgac gcagcagatc gttcacctgc atcggccgct
     2821 ttgccggcgc gcgctcgagg ccgacgcgca tgtccttgag ttccgggagg tattggccga
     2881 cgggcgctgt cagatcgagc ttgccttcct cgaccagcat catcgcggcc acgctggtga
     2941 ccggcttggt catcgaggcg atccagaaaa tcgcgtcggg cttcaacggg atcttgccgg
     3001 cgcgatcgta ggtcccgatc gcctgcaggt acgcgagctt gccgtcgcgc gcgatggcga
     3061 cgacggcccc cggcaacgca cccgtgtcga tctgggattg ataccaaggg gcgatccgcg
     3121 ccagccgctc gggcgagaag ccggcaccga ccgggtcggg cgtcgtgaga ctttgcgcga
     3181 agccgtgcgt cgacagaacg agcgtcaaga gggctgcgcc caccaggcgt acaagtcttt
     3241 tcatcagaat ggctttagca cggcgaggaa cacgataacg atcatcagca ccgtcggcac
     3301 ctcgttccac cagcgataat agcgggcagg tctgatgttt cggtctgcct cgaaggtctt
     3361 gcgccagcgg ccgtagaggt ggtgaacgaa ggtcagcgca atgaccagtg cgaattttgc
     3421 ctgccaccag ccggcatgcc accagtcgcc ttgccaagcg agcagcaggc cgaggatcca
     3481 ggccaagacc atggccggat tcatgatgcc gcgcagca
//
LOCUS       DASWGA010000577         5207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_440141, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000577 DASWGA010000000
VERSION     DASWGA010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5207
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440141"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..930
                     /locus_tag="VF991_13640"
     CDS             <1..930
                     /locus_tag="VF991_13640"
                     /inference="COORDINATES: protein motif:HMM:NF018485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557537.1"
                     /translation="LPIVIGAGVLIGMALACTTSGITANIAARVVQPNRRTLAFGIVS
                     AAGSVGTILTAPIAAYLLNHDGWRTAVWAFAILALAMLPAAWMGSRADKLPNSVSTDR
                     DLTLLGALGEARRHPGYVVMALAFFVCGLQLVFLTTHLPTYLAQCGMDASYSALVLML
                     IGAFNVVSSWLFGWLGDKYPKRLLLAAIYLLRSLALALFFMFPPTPLSVVLFGAAMGV
                     LWLGVIPLVNGLVVQIFGLRFLSTLTGIAFLSHQAGSFLGAWGGGYLFDLMGSYDLAW
                     KIGVLIGLIAGTMQLLMNDRPTARMQALQAAAA"
     gene            1006..3909
                     /gene="uvrA"
                     /locus_tag="VF991_13645"
     CDS             1006..3909
                     /gene="uvrA"
                     /locus_tag="VF991_13645"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEX9557538.1"
                     /translation="MAKSRFPAAEPHRFISIRGAREHNLQNVDLDLPRDRLVVITGLS
                     GSGKSSLAFDTIYAEGQRRYVESLSAYARQFLELMQKPDVDSIEGLSPAISIEQKTTS
                     RNPRSTVGTVTEVYDYLRLLFARVGVPYSPATGLPIESQTVSQMVDRIKTMADGTRLY
                     LMAPIARGRKGEYRKELQDLQKKGFQRVKIDGKLYEIAEAPALDKKYKHDIDVVVDRI
                     VVRPDLGNRLADSIETALNLAEGLAVAENADTGERTVFSARFACPVSGFSIEEIEPRL
                     FSFNAPQGACPSCDGLGVKMFFDPEMVVPDDRLSLAEGAIAPWADSSGQYYMQTLESI
                     AKHFKVKTSTPWRDLPKKVRDVILNGSGSESIAMRYDDGIRQYQTTKPFEGVIPNLDR
                     RWKETDSSWVREELERFQRESKCETCKGARLKPEALAVKIAGLNISQTTEFGISEAVK
                     WFGELAPKLTAKQREIAARILKEINERLGFLDNVGLSYLTLNRTSGTLSGGESQRIRL
                     ASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLKTLTRLRDLGNTVLVVEHDEEAIRAAD
                     HLVDMGPGAGAHGGKVIAEGTPDEVMANSASLTGQYLSGFRQVPIPKTRREPPAPPSS
                     KGGGRWLTVKGARENNLQNVTASIPLGTFTCITGVSGSGKSTLIIETLYKALARRLNG
                     AREHPGEHSGLDGAGHLDKIVDIDQSPIGRTPRSNPATYTGAFSPIRDWFSQLPESTE
                     RGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVQCDVCKGKRYNRETLEIHFR
                     GKSIADVLEMTVDEGVEFFKAVPVIRDKLLTLQQVGLGYIHIGQQATTLSGGEAQRVK
                     LAKELSRRATGRTLYILDEPTTGLHFEDVRKLLEVLHRLVDGGNTVVVIEHNLEVIKT
                     ADWILDLGPDGGAGGGRLVAEGPPEQIVKVAESYTGQYLARHLPRSAAAKKRA"
     gene            3955..4146
                     /locus_tag="VF991_13650"
                     /pseudo
     CDS             3955..4146
                     /locus_tag="VF991_13650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611730.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(4247..4582)
                     /locus_tag="VF991_13655"
     CDS             complement(4247..4582)
                     /locus_tag="VF991_13655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018236363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HEX9557539.1"
                     /translation="MSQVAPHIETQHHPIKLYLVVWGGLFVLSTCSYLVDYFGLVGYL
                     RWALILIFMVLKAGLIVAVFMHMAWERLALLYAILVPPTLVLIFVGIMVFESNYTLFS
                     RLAFFVAGP"
     gene            complement(4592..>5207)
                     /locus_tag="VF991_13660"
     CDS             complement(4592..>5207)
                     /locus_tag="VF991_13660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004434085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="heme-copper oxidase subunit III family protein"
                     /protein_id="HEX9557540.1"
                     /translation="SWGKAMMWIFLLSDTFIFSCFLLSYMTVRTSTVVSWPNPSEVFA
                     LTIGGSHIPLILIAIMTFVLISSSGTMAMAVNFGYRRDRRRTAILMLATALLGATFVG
                     MQAFEWSKLIAEGVRPWGNPWGAVQFGSSFFLITGFHGTHVTIGVIFLIIMARKVWRG
                     DFDQARRGFFTSRKGSYEIVEITGLYWHFVDLVWVFIFALFYLW"
BASE COUNT          988 a         1759 c         1617 g          843 t
ORIGIN      
        1 ctgccgatcg tgatcggcgc cggcgtgctg atcggcatgg cgctcgcctg cacgacgtcg
       61 ggcatcaccg ccaacatcgc cgcccgcgtc gtgcagccca accgccgcac gctggccttc
      121 ggcatcgtct cggcggcggg ctcggtcggc accatactga ccgcgccgat cgcggcctac
      181 ctgctgaacc atgacggctg gcgcaccgcc gtctgggcgt tcgcgatcct ggcgctggcc
      241 atgctgccgg ccgcctggat gggcagccgc gccgacaagc tgcccaacag cgtatcgacc
      301 gaccgcgacc tcaccctgct cggcgcgctg ggcgaggcgc gccggcatcc cggttacgtc
      361 gtgatggcgc tcgccttctt cgtctgtggc ctgcaactgg tcttcctcac cacccatctg
      421 ccgacctacc tcgcgcagtg cggcatggat gcttcctaca gcgccttggt gctgatgctg
      481 atcggcgcct tcaacgtcgt gagctcctgg ctgttcggct ggctgggcga caagtatccc
      541 aagcgcctgc tgctggcagc gatctacctg ctgcgctcgc tcgcgctggc gctcttcttc
      601 atgtttcccc cgacgccgct ttccgtggtg ctgttcggcg ccgccatggg cgtgctgtgg
      661 ttgggcgtga tccccctggt caacgggctg gtggtgcaga ttttcggcct gcgcttcctg
      721 tcaaccttga ccggcatcgc cttcctcagc caccaggccg gctccttcct cggcgcctgg
      781 ggcggcggct atctctttga tctcatgggc tcctacgacc tcgcctggaa gatcggggtg
      841 ttgatcggcc tgatcgctgg caccatgcag ctgctgatga acgaccggcc gaccgcccga
      901 atgcaggcac tgcaggcagc ggccgcctga cgccggggct ggcaaggctg ggggcgaatc
      961 gccatatgcg atgatcccgc tcatcgccta ttgttgcccg tacagatggc caagtcccgt
     1021 ttccctgccg ccgagccgca tcgcttcatc tcgatccgcg gcgcccgcga acacaatctg
     1081 cagaacgtcg atctcgacct gccgcgcgac cgcctggtgg tgatcaccgg gctgagcggt
     1141 tcgggcaagt cctcgctcgc cttcgacacg atctacgccg agggccagcg ccgctacgtc
     1201 gagagcctgt cggcctatgc ccgccagttc ctcgagctga tgcagaagcc cgacgtcgat
     1261 tcgatcgagg gcctgtcgcc cgccatctcg atcgagcaga agacgacgtc gcgcaatccg
     1321 cgctcgaccg tgggcacggt caccgaggtc tacgactacc tgcgcctcct gttcgcccgg
     1381 gtcggcgtgc cctattcgcc cgccaccggc ctgccgatcg agagccagac cgtctcgcag
     1441 atggtcgatc gcatcaagac gatggccgac ggcacgcggc tctacctgat ggcgcccatc
     1501 gcgcgcggcc gcaagggcga gtaccgcaag gaactgcagg acctccagaa gaagggtttc
     1561 cagcgcgtca agatcgacgg caagctctac gagatcgccg aagccccggc gctcgacaag
     1621 aaatacaagc atgacatcga cgtcgtcgtg gaccgcatcg tggtgcgacc cgacctcggc
     1681 aaccggctgg ccgattcgat cgagacggcg ctcaatctcg ccgaaggact cgcggtggcg
     1741 gagaacgccg acaccggcga gcgcacggtg ttctcggcgc gcttcgcctg tcccgtctcg
     1801 ggcttctcca tcgaggagat cgagccccgc ctcttctcct tcaacgcgcc gcagggcgcc
     1861 tgcccgtcct gcgacgggct gggcgtaaaa atgttcttcg atccggagat ggtggtgccg
     1921 gacgaccggc tgtcgctcgc cgaaggggcg atcgcgccgt gggccgattc atcgggccag
     1981 tattacatgc agacgctgga gagcatcgcc aagcacttca aggtcaagac gtcgacgccg
     2041 tggcgcgacc tgcccaagaa ggtgcgcgac gtcatcctga acggcagcgg cagcgaatcg
     2101 atcgccatgc gctacgacga cggcatccgc cagtaccaga cgaccaagcc gttcgagggc
     2161 gtgatcccca acctcgaccg ccgctggaag gagaccgatt cctcgtgggt gcgcgaggaa
     2221 ctcgagcgct tccagcgcga gagcaagtgc gagacctgca aaggcgcccg cctcaagccc
     2281 gaggcgctgg ccgtgaagat cgccggcctc aacatcagcc agacgaccga gttcggcatc
     2341 agcgaggccg tgaagtggtt cggcgagctg gcgcccaagc tcaccgccaa gcagcgcgag
     2401 atcgccgccc gcatcctgaa ggagatcaac gaacggctgg gtttcctcga caatgtgggg
     2461 ctctcctacc tgacgctcaa ccgcacctcg gggaccttgt cgggcggcga gagccagcgc
     2521 atccggctcg cctcgcagat cggttcgggc ctgaccggcg tgctctacgt gctcgacgag
     2581 ccgtcgatcg gcctgcatca gcgcgacaac gaccggctgc tgaagacgct gacccgcctg
     2641 cgcgacctcg gcaacacggt gctggtggtc gagcacgacg aagaagcgat ccgtgccgcc
     2701 gaccatctgg tcgacatggg gccaggcgcc ggcgcgcatg gcggcaaggt catcgccgag
     2761 ggcacgcccg acgaggtcat ggccaacagc gccagcctca ccggccaata cctttcagga
     2821 tttcgccagg tacccattcc caagacgcgc cgcgagccgc cggcaccccc cagcagcaaa
     2881 gggggcggcc gctggctgac cgtgaagggc gccagggaaa acaacctgca gaacgtgacg
     2941 gccagcatcc cgctcggcac cttcacctgc atcaccggcg tgtcgggcag cggcaagagc
     3001 acgctgatca tcgaaacgct ctacaaggca ttggcgcgcc ggctgaacgg cgcgcgcgag
     3061 catcccggcg agcatagcgg gctcgatggc gcgggccacc tcgacaagat cgtcgacatc
     3121 gaccagtcgc cgatcggccg cacgccgcgc tccaatccgg cgacctacac cggcgccttc
     3181 tcgccgatcc gcgactggtt ctcccagctc cctgaatcga cggaacgcgg ctataagccc
     3241 ggtcgcttct cgttcaacgt caagggcggc cgctgcgagg cctgccaggg cgatggcgtc
     3301 atcaagatcg agatgcactt cctgcccgac gtctacgtcc agtgcgatgt ctgcaagggc
     3361 aagcgctaca accgggaaac gctggaaatc catttccgcg gcaagtcgat tgccgacgtg
     3421 ctggagatga cggtcgacga gggcgtcgag ttcttcaagg ccgtgccggt catccgcgac
     3481 aagctcctga ccttgcagca ggtcgggctg ggctacatcc atatcggtca gcaggcgacg
     3541 acactctcgg gcggcgaggc gcagcgggtc aagctcgcca aggagctgtc gcgccgcgcc
     3601 accggccgca cgctctatat cctcgacgag ccgacgacgg gcctgcattt cgaggacgtg
     3661 cgcaagctcc tggaagtgct gcatcggctg gtcgacggcg gcaacacggt ggtggtgatc
     3721 gagcacaatc tcgaagtcat caagactgcc gactggatcc tcgatctcgg ccccgacggc
     3781 ggcgccggcg gcggccggct ggtcgccgaa ggcccgcccg agcagatcgt caaggtggcc
     3841 gagagctata ccggccagta cctcgcccgc cacctgccgc gtagcgccgc cgccaagaag
     3901 cgcgcttagc aggaagcgga cacatcgcca aatcagtctc ctctcccccg ctaggtcgac
     3961 cggctctggc ggtccatcaa atatgagaaa gtccatctgc gcgcctatac cagcgtgtcc
     4021 gaggcccgcg cctcgatcgg cagatatctg accttctaca atggtcggag gccgcatcgg
     4081 agcctgagct ggcaaacgcc cgcagtctat ttcaacccac cgaagccaat ccaggtcacg
     4141 gcatgacaga ggccaaaagc tacttataag atatattggg ccacttctct ctagcgaatg
     4201 gcagcacagg gcgcagcccg caaggcggat tccgaaatca gatccgtcat ggcccggcga
     4261 cgaagaaggc cagccggctg aagagcgtat agttcgattc gaaaaccatg atcccgacga
     4321 agatcaagac cagcgtcggc ggaacgagga tcgcgtagag cagcgccagg cgctcccaag
     4381 ccatgtgcat gaagaccgcg acgatcaggc cggccttcag gaccatgaag atcaggatca
     4441 gcgcccagcg cagatagccg acaaggccga aataatcgac caggtaggag caggtgctca
     4501 ggacgaacag ccctccccac accaccagat agagcttgat cggatgatgt tgcgtctcga
     4561 tgtggggcgc gacctgtgac atgtcggcct ctcaccagag atagaacagt gcaaaaatga
     4621 acacccagac gagatcgacg aagtgccagt agagtcccgt gatctcaacg atctcgtagc
     4681 ttcccttccg gctcgtaaag aagccgcgcc gcgcctggtc gaagtcgccc cgccagacct
     4741 tgcgggccat gatgatgaga aagatcacgc cgatcgtgac atgcgtgcca tggaagcctg
     4801 tgatcaagaa gaagctcgag ccgaactgga ctgcgcccca gggatttccc cagggccgaa
     4861 cgccttccgc gatcagcttc gaccattcga acgcctgcat gccgacaaag gtcgcgccga
     4921 gcagtgcggt cgccagcatc aggatcgccg tcctccggcg gtcgcggcga tagccgaaat
     4981 tgacggccat cgccatcgtg ccgctgctac tgatcagcac gaaggtcatg atggcgatca
     5041 ggatcagcgg gatatggctg ccgccgatgg tgagcgcgaa gacttcgctc ggattgggcc
     5101 aggatacgac agtcgacgtc ctgaccgtca tgtaagacag caggaagcag gagaagataa
     5161 aggtgtcgct gagcaggaag atccacatca tggccttccc ccaagag
//
LOCUS       DASWGA010000578         2388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1327092, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000578 DASWGA010000000
VERSION     DASWGA010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1327092"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2087
                     /gene="ligA"
                     /locus_tag="VF991_13665"
     CDS             <1..2087
                     /gene="ligA"
                     /locus_tag="VF991_13665"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEX9557541.1"
                     /translation="LGEEISYHDKLYHEQDAPEISDADYDRLRQRLKTIEERLPELID
                     SSSPTQRVAPTPTTAFAKVRHARPMLSLDNAFTDEELQGFFDRVRRGLERETDLRPDA
                     EIAFACEPKIDGLSISLRYEGGEFVVGATRGDGTTGEDVTANLRTVKDIPHKLKGKGV
                     PKAFDVRGEVYMERKAFQQMNERQEAAGEKTFANPRNAAAGSLRQLDPAITATRPLRF
                     FAYAWGEAEPRSWKTHSAYLKLLREWGFKVNPLSQLCRTPAAVRDFYREMSIARPSLP
                     YDIDGVVYKLDRIDWQERLGFVSRAPRWAIAHKFPAEQARTRLNGILISVGRTGALTP
                     VADLEPVTVGGVVVARATLHNADEIERLGVRAGDMVIMQRAGDVIPQILGYVPEERPK
                     RTTKFQFPTHCPCPLKTKVQSEEGGVVRRCTGGLECPFQQVERLRHFVSRNCFDIEGL
                     GGTHIENFWRDGLLKVPGDIFRLPKRVDEIRKREGWGDLSVRNLVGAIEARRTISLDR
                     FINAIGIPLIGEATAKILAQEYGDADAWLAEMLQAAKERKKHPDPVKKEKAAVEVGPS
                     YGRLCNVEQIGVTTADAMCAFFGEGHTVDIIRDLLKELSVQPVERRVVAADAKLKDKI
                     VVFTGELSAMTRDAAKARAEELGAKVTDSVSKKTSLVVVGENAGSKARKAAELGVQTM
                     TEQEWLKLAGIG"
BASE COUNT          425 a          786 c          807 g          370 t
ORIGIN      
        1 ggcttggcga agagatttcc tatcatgaca agctctatca tgagcaggat gcgccggaga
       61 tctcggacgc cgactacgac aggctgcgcc agcgcctgaa gacgatcgag gagcgcctgc
      121 ccgagcttat cgactcgtcc agccctaccc agcgggtggc gccgacgccg accaccgcct
      181 tcgccaaggt gcggcatgcc aggccgatgc tgtcgctcga caacgccttc accgacgagg
      241 agctgcaggg ctttttcgac cgcgtccgtc gcggcctgga gcgcgagacc gatctcaggc
      301 ccgacgccga gatcgccttt gcctgcgagc ccaagatcga cggcctgtcg atcagcctgc
      361 gctacgaggg cggcgaattc gtcgtcggcg ccacgcgcgg cgacggtacg accggcgagg
      421 acgtcaccgc caacctgcgc accgtgaagg acatcccgca caagctgaaa ggcaaagggg
      481 tgcccaaagc gttcgacgtg cgcggcgagg tctatatgga acgcaaggcc ttccagcaga
      541 tgaacgagcg ccaggaagcc gccggcgaaa agaccttcgc caacccgcgc aatgcggcgg
      601 ccgggtcgct gcgccagctc gatcccgcga tcaccgccac ccggcccttg cgcttcttcg
      661 cctatgcctg gggcgaggcc gagccgcgct catggaagac ccacagcgcg tacctcaagc
      721 tcctgaggga atggggcttc aaggtcaatc cgctgtccca gctttgccgc acgccggccg
      781 cggtgcgcga cttctaccgc gagatgagca tcgcgcggcc gtcgctgccc tatgacatcg
      841 acggcgtggt ctacaagctc gaccgcatcg actggcagga gcggctgggc ttcgtcagcc
      901 gcgcgccgcg ctgggcgatc gcccacaagt tcccggccga gcaggcgcgc acgcggctga
      961 acggcatttt gatctcggtc ggccgcaccg gggcgctgac gccggtcgcc gatctcgagc
     1021 cagtcactgt cggcggcgtc gtggtggcgc gcgccacgct gcacaacgcc gacgagatcg
     1081 agcggctcgg cgtgcgcgcc ggcgacatgg tgatcatgca gcgcgccggt gacgtcatcc
     1141 cgcagatcct gggttacgtg ccggaggagc ggccgaaaag gaccaccaag ttccagttcc
     1201 ccacgcactg cccctgtccg ctcaagacca aggtgcagag cgaggagggc ggcgtggtgc
     1261 gccgttgcac cggcggtctc gaatgcccgt tccagcaggt cgagcggctg cgccatttcg
     1321 tgtcgcgcaa ctgcttcgac atagaggggc tgggcggcac ccatatcgag aatttctggc
     1381 gcgacgggct cctgaaagtg cccggcgaca tcttccgtct gcccaagcgg gtcgacgaga
     1441 tcaggaagcg cgagggctgg ggcgatcttt cggtgcgcaa cctggttggc gccatcgaag
     1501 cgcggcgcac catctcgctc gaccgcttca tcaatgccat cggcatcccg ctgatcggcg
     1561 aggcgacggc caagatcctg gcgcaggaat atggcgatgc cgatgcctgg ctcgccgaga
     1621 tgctgcaggc ggccaaggag cgcaagaagc atcccgatcc ggtgaagaag gagaaggcgg
     1681 ccgtcgaggt cgggccgagc tacggccggc tgtgcaatgt cgagcagatc ggcgtgacga
     1741 cggccgacgc gatgtgcgcc ttcttcggcg agggccacac ggtcgacatc atccgcgacc
     1801 tcttgaaaga gctctcggtg cagccggtcg agcgccgggt ggtggcggcg gacgccaagc
     1861 tcaaggacaa gatcgtggtc ttcaccggcg agctgtcggc gatgacccgc gacgccgcca
     1921 aggcgcgcgc cgaggagctg ggcgccaagg tcaccgattc ggtgtcgaag aagaccagcc
     1981 tcgtggtggt cggcgagaat gccggctcca aggcgcgcaa ggccgccgag ctcggcgtcc
     2041 agaccatgac cgaacaggaa tggctgaagc tggccggcat tggctgagct agtttgttgg
     2101 gcctcagtac aattgtcatc ccgagcgaag cgagggacct ttcctgtggc ctcaaaggtc
     2161 cctcgcttcg ctcgggatga cagcagtcgc gtaactggag tggcgcgctc caaaagaaaa
     2221 cggccgggcg attgcccggc cgttcccgaa gtctctctga ggaccgtctt actggatgac
     2281 gatctcgacg cggcggttct gcggctcgcg gacgccgtcg gcggtcggaa ccagcagctg
     2341 cgtctcgccc ttgccgatga ccgtgatcgc ctgcggcggc acgccttc
//
LOCUS       DASWGA010000579         2025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1589481, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000579 DASWGA010000000
VERSION     DASWGA010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1589481"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VF991_13670"
     CDS             <1..748
                     /locus_tag="VF991_13670"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="substrate binding domain-containing protein"
                     /protein_id="HEX9557542.1"
                     /translation="TRALHLTEDGEVFYAAAQRIVAEIETLENQIAGQSGNPHGVLRV
                     TTSLAFSTHQLTPVLPEFLARHPLIELDLLPTDRVIDMVEEGVDIAIRIGRLADTSFM
                     ARKIGEDKRLICAAPAYLARHGTPRRPADLARHNCIVSRERAYLNRWPFRIDGQVSEI
                     EVAGRIAVNEGEMQMQLALQGIGIVRLTRLTMARAIRDGALVRLLDDYSADEPVGIHA
                     VYPHRRHLAPKVPAFVNFLIEKFTPPPWEI"
     gene            804..1175
                     /locus_tag="VF991_13675"
     CDS             804..1175
                     /locus_tag="VF991_13675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557543.1"
                     /translation="MDRDTDLFVQAFWVRCRETIRPELDFTVDDLKSEGHAAHVATQE
                     FSKVPDQLPDAGPSLTLTVHPNGSPEGHALQFRGDVARSDVVVTGSTGTSRRHELADL
                     ELPVVKAEISAWLTELLGRRT"
     gene            complement(1184..>2025)
                     /locus_tag="VF991_13680"
     CDS             complement(1184..>2025)
                     /locus_tag="VF991_13680"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9557544.1"
                     /translation="GRGAADSKSGVAILAHVARHLAGTPIPRGSVHVLFDADEHTGRF
                     GGVRAYLAAIPRLPDGVSLGYPGNDCIVVGSRGFLRARLHFAGRAAHSGEIERTGVNA
                     LTKAAVFALKVAETDLPDTHDPAFPFGPAATVTRIEGGEGFSVVPDHATCHIDIRLTR
                     AFDGAKAASWLEEIVHSVDGQARIETVDHWPAYLVEPSDRLVQSFAVAAERAFGRPIA
                     SDVCGPSNIGNLLAARGVPTLCAPGVSFANMHAANESASIESMGPVYAMYCDAALSFL
                     NRP"
BASE COUNT          346 a          686 c          682 g          311 t
ORIGIN      
        1 cacgcgggcc ttgcacctca ccgaagacgg cgaggtgttt tatgccgccg cgcagcgcat
       61 cgtggccgag atcgagacgc tggaaaacca gatcgccggc cagagcggca acccgcatgg
      121 cgtgctgcgg gtgacgacgt cgcttgcctt ttcgacccat cagctcacgc cggtgctgcc
      181 ggagttcctg gcgcgccatc ccctgatcga gctcgacctg ctgccgacag accgcgtgat
      241 cgacatggtc gaggagggtg tcgatatcgc catccgcatc ggccggctgg ccgacaccag
      301 cttcatggcg cgcaagatcg gcgaggacaa gcgcctgatc tgcgccgcgc ccgcctacct
      361 ggcgcgccac ggcacgccgc gcagacccgc ggatctggcg cggcacaatt gcatcgtgtc
      421 gcgcgaacgc gcctatctca atcgctggcc gttcaggatc gacggccagg tcagcgagat
      481 cgaggtcgcc ggccggatcg ccgtcaacga gggcgagatg cagatgcagc ttgccctgca
      541 gggcatcggc atcgtgcggc tgacgcggct caccatggcc cgcgccatcc gcgacggcgc
      601 cctggtgcgg ctgctcgacg actattcggc cgatgaaccg gtgggcatcc acgccgtcta
      661 cccgcaccgc cggcatctcg cgcccaaggt cccggctttc gtgaatttcc tgatcgagaa
      721 gttcacgccg ccgccctggg agatttgagc cgccggatga tgctaggatc ggcgcaatcg
      781 aacatgaacg tcgaggaggg gagatggatc gcgacacgga ccttttcgtg caggccttct
      841 gggtcagatg ccgggagacc atacgtccgg agctcgactt cacggtcgac gatctgaaga
      901 gcgaaggcca cgccgcgcac gttgcaacgc aggaattctc caaggtgccc gaccagctgc
      961 ccgacgccgg tccctcgctc accctgacgg tgcatcccaa tggctcgccg gaaggccacg
     1021 ccctgcagtt ccgcggcgac gttgcccgca gcgatgtcgt ggtgacaggc tcgaccggca
     1081 cgtcgcgccg ccatgagctg gccgatctcg agctgcccgt ggtcaaggcc gagatttccg
     1141 cctggctcac cgagcttttg ggccggcgca cctgatcact acctcaaggc cgattgagga
     1201 agctgagcgc ggcgtcgcaa tacatggcgt agaccggccc catcgactcg atcgaggccg
     1261 attcgttggc ggcatgcatg ttggcgaagc tgacgccggg cgcgcagagg gtcggcacgc
     1321 cccgcgccgc caaaaggttg ccgatattgg aaggcccgca gacatcgctg gcgatcggcc
     1381 ggccgaacgc ccgctcggcc gccacggcaa aactctggac cagccgatca ctcggctcga
     1441 cgaggtaggc cggccaatga tcgacggtct cgatgcgggc ctggccatcg actgagtgaa
     1501 cgatctcctc cagccagctt gcggccttgg ccccgtcgaa ggcgcgggtg agacggatat
     1561 cgatgtggca ggtcgcgtgg tccggcacga cgctgaatcc ctcgccgcct tcgatccgcg
     1621 tcaccgtggc cgccggcccg aaggggaacg ccggatcgtg cgtgtcgggc aagtcggttt
     1681 cggccacctt cagcgcaaag acggcggcct tggtgagcgc attgacgccg gtgcgttcga
     1741 tctcgcccga atgcgccgcc cggccggcaa aatgcagcct ggcgcgcagg aagccgcggc
     1801 tgccgacgac gatgcagtcg ttgccgggat agcccagcga tacgccatcg ggcaggcgcg
     1861 gtatggccgc gagataggcg cgcacgccgc cgaagcggcc ggtatgctcg tcggcatcga
     1921 acagcacgtg caccgagccg cgggggatcg gcgtgccggc caggtgccgc gcgacatggg
     1981 ccaggatggc aacgcctgat ttggaatcgg cggcgccacg gccca
//
LOCUS       DASWGA010000580         3000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_440520, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000580 DASWGA010000000
VERSION     DASWGA010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440520"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /locus_tag="VF991_13685"
     CDS             <1..451
                     /locus_tag="VF991_13685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEX9557545.1"
                     /translation="YADLVNAACAGRTTGMTISMHLCRGNFRSTWMAQGGYERVADIL
                     FNQMGVDAYFMEYDTERAGGFEPLRLLPKGKQVVLGVMTSKTGALESKDQLKRRIDEA
                     AKFAPLDQLCLSPQCGFASTEEGNLLAEDEQWAKLGRCVEVAREVWG"
     gene            840..1337
                     /locus_tag="VF991_13690"
     CDS             840..1337
                     /locus_tag="VF991_13690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003614277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX9557546.1"
                     /translation="MRNDRLLAGLGLAGLAFAFAAPAEAQLLARKDLSLATALAIATT
                     AADLCKSQGYNVSVAVVGRNGELLVHLRGDNTPPHTMENSFRKAYSSRTYRVPSGELV
                     KRLKDNPQAPFVYLTNVVAAQGALPIKVGDDTIGAVGVSGAPGGEKDEVCSKAGIDKV
                     ADTLK"
     gene            complement(1342..1896)
                     /locus_tag="VF991_13695"
     CDS             complement(1342..1896)
                     /locus_tag="VF991_13695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557547.1"
                     /translation="MLKRRTVIQASLAGGLLAALAGLAEIGKWRTALGPTDGAGWRPI
                     DWPFPRDGWPPGRAWRQRDGTEVYVRPKLGFCGNCDTGVVTDEEVDRVTDVDLLDERF
                     APAQEGRRIRITDLFGRARLYRFKLKNGAQQLAEGIAVSYKCDLIVAVVAGNVADEGI
                     RKSAHRFLESNTVQVWLNQQLEGR"
     gene            complement(1906..>3000)
                     /locus_tag="VF991_13700"
     CDS             complement(1906..>3000)
                     /locus_tag="VF991_13700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557548.1"
                     /translation="SGGAQMVRVCDGATLPNANKSAVYMLRTFGGEAHEVWNVADPAN
                     PVLVTRLAGLKDTHKNWWECDTGIAYLVSGAPDWRTKRMTQVYDLSDPAHPVKIRDFG
                     LPGQQPGATGTVPTELHGPISSGPQGNRVYFAYGTNKGGILQIVDREKLLKGPKEPAP
                     DNLRQPVVGELAMTPWNGAHTTFPMPKMPIAEFARDKDGGVRDIVMIVDESILNECLE
                     ARQMVWFADVSIENRPMVVSSWTVPEASGNFCQRGGRFGAHSSNESMEPVYYKKMAFI
                     AFFNAGVRALDVRDPFHPKEVGYFIPAITDKTDKRCVKIDGKDRCKTAIQTNNVETDA
                     RGFVYIVDRANTGMHILELAGEARTVAGLK"
BASE COUNT          502 a          984 c          983 g          531 t
ORIGIN      
        1 ctacgccgac ctggtgaatg ccgcctgtgc cggccgcacg acgggcatga ccatctccat
       61 gcatctctgc cgcggcaact tccgttcgac ctggatggcg cagggcggct acgagcgggt
      121 ggccgacatc ctgttcaacc agatgggcgt cgatgcctat ttcatggaat acgacaccga
      181 acgcgccggc ggcttcgagc cgctgcgctt gctgcccaag ggcaagcagg tggtcctggg
      241 cgtcatgacc tccaagaccg gcgcgctgga gagcaaggat cagctcaagc gccgcatcga
      301 cgaggccgcc aagttcgcgc cactcgatca gctctgcctg tcgccgcaat gcggcttcgc
      361 cagcaccgag gaaggcaacc ttttagccga ggacgaacag tgggcgaagc tcggccgttg
      421 cgtggaggtg gccagagagg tgtggggctg aatgaactgg tgactgctga cctggaagga
      481 catcgcgggc tttctgaccg tcgccgtgat cgcaagcgcg atgatccatg tattcgtcgg
      541 cttgccaaac cagattcgac cgacgaattt tgacttcggc ccggacggga gttgcaccca
      601 cataccgaac ggtgaaccgg tatgcgtgaa gaagttcccg gcacatcgat aaactcgctt
      661 tcatgtcatc ctgagcacag tgagcgcggt ctcggcgcag cggcgatgag gtcccttcga
      721 ctacgctcag ggcaggcctt cgctgcgctc aggacgacat gggctttcac gcgggtgtga
      781 tccgggcgca cctgtgtcca ttgctatggt tcctttccca aagggggagg aacacaccaa
      841 tgcgcaacga tcgactgctt gccgggctcg gcctcgcagg ccttgccttc gccttcgccg
      901 cgccggccga ggcgcaattg ctggcgcgca aggacctgtc gctggccacc gcacttgcca
      961 tcgccacgac cgccgccgat ctctgcaaga gtcagggcta caacgtctcg gtggcggtgg
     1021 tcggccgcaa cggcgagctc ctcgtgcatc tgcgcggcga caacaccccg ccgcacacca
     1081 tggagaacag cttccgcaag gcctactcct cgcgcaccta tcgcgtgccc tcgggcgaac
     1141 ttgtaaagcg gctgaaggac aacccgcagg cgccatttgt gtacctgacc aacgtcgtcg
     1201 cagcccaagg cgcactgccg atcaaggtcg gcgacgacac gatcggcgcg gtcggcgtgt
     1261 cgggcgcgcc cggcggcgag aaggacgaag tctgctccaa ggccggcatc gacaaggtcg
     1321 ccgatacgtt gaagtagcga gtcaccgccc ctcgagctgc tggttcagcc agacctggac
     1381 ggtgttcgat tcgagaaagc gatgggctga tttgcgtatg ccctcgtcgg caacgttgcc
     1441 ggcgacgacc gcgacgatca ggtcgcactt gtaggaaacc gcgatgccct cggcgagctg
     1501 ctgggcgccg ttcttcagct tgaagcggta gagccgggcg cggccgaaca ggtcggtgat
     1561 gcggatccgg cggccttcct gggcgggggc gaagcgctcg tccaaaaggt cgacatcggt
     1621 gacgcgatcg acttcctcgt cggtgaccac gccggtgtcg cagttgccgc aaaaaccgag
     1681 cttcggccgc acatagacct cggtgccgtc gcgctggcgc caggcgcgcc ccggcggcca
     1741 gccgtcgcgc gggaacggcc agtcgatcgg ccgccagccg gcgccgtcgg tcggtcccaa
     1801 cgccgtccgc catttgccga tctcggcgag gccggccagg gccgctaaaa ggcctcccgc
     1861 cagcgacgcc tggatgacgg tgcggcgctt cagcatcgcc tcagctcatt tcagcccggc
     1921 cacggtgcgc gcctcgccgg ccagctccag gatatgcatc ccggtattgg cgcgatcgac
     1981 gatgtagacg aagccccgcg catcggtctc gacattgttg gtctggatgg cggtcttgca
     2041 gcgatccttg ccgtcgatct tgacgcagcg cttgtcggtc ttgtcggtga tcgccggaat
     2101 gaaatagccg acctccttgg gatggaaggg gtcgcgcacg tcgagcgcgc gcaccccggc
     2161 gttgaagaag gcgatgaagg ccatcttctt gtagtagacc ggctccatgc tctcgttgga
     2221 ggagtgcgcg ccgaagcgcc cgccgcgctg gcagaaattg ccgctcgcct cgggcacggt
     2281 ccagctcgac accaccatcg gccggttctc gatcgagacg tcggcgaacc acaccatctg
     2341 ccgcgcctcc aggcactcgt tcaggatcga ctcgtcgacg atcatgacga tgtcgcgcac
     2401 cccgccatcc ttgtcgcggg cgaactcggc gatcggcatc ttgggcatgg ggaaggtggt
     2461 gtgcgcgccg ttccacggcg tcatcgcaag ctctcccacc acgggctggc gcagattgtc
     2521 cggtgccggc tccttcggtc ccttcagcaa tttttcacgg tcgacgatct gcaggatgcc
     2581 gcccttgttg gtgccgtagg cgaaatagac gcggttgccc tgcggcccgc tcgagatcgg
     2641 tccgtgcagc tcggtcggca ccgtgccggt ggcgcccggc tgctggccgg gcaggccgaa
     2701 gtcgcggatc ttcaccggat gggcggggtc gctgagatcg tagacctggg tcatgcgctt
     2761 ggtgcgccag tcgggtgcgc cggagaccag gtaggcgatg ccggtgtcgc actcccacca
     2821 gttcttgtgc gtgtccttca gcccggcgag ccgcgtgacc agtacgggat tggcgggatc
     2881 ggcgacgttc cacacttcat gcgcctcgcc gccgaaggtg cgcagcatgt agaccgccga
     2941 cttgttggca ttgggcaagg tggcgccatc gcacacccgc accatctgcg cgccgccgct
//
LOCUS       DASWGA010000581         1810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1710862, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000581 DASWGA010000000
VERSION     DASWGA010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1710862"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1074
                     /gene="glmU"
                     /locus_tag="VF991_13705"
     CDS             <1..1074
                     /gene="glmU"
                     /locus_tag="VF991_13705"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR01173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEX9557549.1"
                     /translation="PVLVVYADCPLIASETLQRLVDACRKQHAAVGVLGFVSRDPTPY
                     GRLIVRRGVLERIVESRDADDSEKAIDFCNSGVMCLDGTVIASLLGAIKDDNVKREFY
                     LTDVVAIARAAGHTAIALEGEEAEFLGVNSRAELAAAEKTLQGRLRAAALEAGVSMTD
                     PDTVWLSVDTKLAADVTIGPCVRFGTGVSVASGTEIKAFCDIKGARIGRGAIIGPFAR
                     IRPGSAVADDVHIGNFVELKATRMGRGAKANHLAYLGDSDIGTASNIGAGTIAVNYDG
                     YGKWRTVIGADAFVGSNSSLVAPVRIGRGANVTAGSVITEDVPAGAVAFGRARQVTKK
                     ERAAPLRAKLKARAAAAKRTQKK"
     gene            1096..>1810
                     /locus_tag="VF991_13710"
     CDS             1096..>1810
                     /locus_tag="VF991_13710"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502548.1"
                     /note="Catalyzes the first step in hexosamine metabolism,
                     converting fructose-6P into glucosamine-6P using glutamine
                     as a nitrogen source; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEX9557550.1"
                     /translation="MCGIIGIIGKAPVTPLLVEALKRLEYRGYDSAGVATLVNGHIDR
                     RRAEGKLVNLEARLGVEPLSGMIGIGHTRWATHGKPSERNAHPIATHRVAIVHNGIIE
                     NFQELKDELLAEGRTFDSDTDTEVVAQLLTSHLERQLSPEEAMGKAMERLRGAFALVA
                     LFSGRHDILMGARRGSSLAVGYGDGAMYIGTDALALAPFTKRVAYLEDDDWVVLSAQG
                     ATIFQGRDEVKREIRQSGIS"
BASE COUNT          305 a          627 c          613 g          265 t
ORIGIN      
        1 ccggtcctgg tggtctacgc cgactgcccg ctgatcgcgt ccgagacctt gcagcgcctg
       61 gtcgacgcct gccgcaagca gcatgccgcg gtcggcgtgc tgggtttcgt ctcgcgcgat
      121 cccacgccct atggccgcct gatcgtgcgc cgcggcgtcc tggaaaggat cgtcgaaagc
      181 cgcgacgccg atgacagcga gaaggcgatc gacttctgca attcgggtgt tatgtgcctg
      241 gacggcacgg tgatcgcctc gctgctgggc gcgatcaaag acgacaacgt caagcgcgag
      301 ttctatctca ccgacgtggt cgccatcgcg cgcgccgcgg gccacaccgc catcgcgctg
      361 gaaggcgagg aggcggagtt cctcggcgtc aactcgcgcg ccgagctcgc cgcggcagag
      421 aagaccttgc aaggccgcct gcgtgcggcg gcgctggagg cgggcgtcag catgaccgat
      481 cccgacacgg tgtggctgtc agtcgatacg aagctcgccg ccgatgtcac catcgggccc
      541 tgcgtgcgct tcggcaccgg cgtcagcgtg gcgtcgggca ccgagatcaa ggcgttctgc
      601 gacatcaagg gcgcgcgcat cggccgcggc gccatcatcg gccccttcgc ccgcatccgg
      661 ccgggatcgg cggtggccga cgacgtccat atcggcaatt tcgtcgagct caaggccacc
      721 cgcatgggcc gcggcgccaa ggccaaccac ttggcctatc tcggcgactc cgacatcggc
      781 acggcaagca acatcggcgc cggcaccatc gcggtgaact acgatggcta cggcaagtgg
      841 cgcaccgtga tcggggcgga cgccttcgtc ggctcgaaca gctcgctggt ggcgccggtg
      901 cgcatcggcc gcggcgccaa cgtgacggcg ggcagcgtca tcaccgagga cgtgccggcc
      961 ggcgcggtgg ccttcggacg ggcgcggcag gtcacaaaga aggagcgggc agccccgctt
     1021 cgtgccaaac tgaaagcccg cgcggccgcc gccaagcgga cccaaaagaa gtagcctccg
     1081 ctcggacgat cccccatgtg cggcatcatt ggaatcatcg gcaaggcgcc ggtcaccccc
     1141 ttgctggtcg aggcgctgaa gcggctggaa tatcgcggct acgattcggc gggcgtagcc
     1201 accctggtca acggccacat cgaccgccgc cgcgccgagg gcaagctggt caatctcgaa
     1261 gcccggctcg gcgtcgagcc gctgtccggc atgatcggca tcggccacac ccgctgggcg
     1321 acccacggca agccgtcgga acgcaacgcc catccgatcg ccacccaccg ggtggcgatc
     1381 gtgcacaacg gcatcatcga gaacttccaa gaactgaagg acgagctttt ggccgaaggc
     1441 cgcaccttcg acagcgacac cgataccgaa gtggtggccc agcttttgac ctcgcatctc
     1501 gagcgccagc tctcgcccga ggaggcgatg ggtaaggcga tggaacgtct gcgcggcgcc
     1561 ttcgcgctgg tcgccctgtt cagcggccgc cacgacatcc tgatgggcgc gcgtcgcggc
     1621 agctcgctgg ccgtcggcta tggcgacggc gcgatgtata tcggcaccga tgcgctggcg
     1681 ctggcgccgt tcaccaagcg cgtcgcctac ctcgaggacg acgactgggt cgtactgagc
     1741 gcccagggcg ccacgatctt ccagggccgc gacgaggtga agcgcgagat ccgccagagc
     1801 ggcatctccg
//
LOCUS       DASWGA010000582         4549 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1327606, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000582 DASWGA010000000
VERSION     DASWGA010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4549
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1327606"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /locus_tag="VF991_13715"
     CDS             complement(<1..853)
                     /locus_tag="VF991_13715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557551.1"
                     /translation="MLLIRLAAQNLGRRRLRALFLGVAVALAVGVGVASFITGWALGD
                     GIAASFSRMGADLVVVPRGTLVNITSSLLTVQPTDETLDAGVVAKIAGIDGIARAAPQ
                     RLVRVIVEGRGVNLIAFDPAVDFTVQTWLREQRQGPIGVGELLAGGRLPGAVGESLSV
                     CRRPMEIYGRLAKTGVGPFDESYFITFAGLDFLAALCRQDPELAKAAKAVSADHSRHK
                     NEMALCMPDYVAGKVTAILLQLSPTARAEQVKFAISQIPDVKVVEGNSVLTSSRQALR
                     TLFVGIAV"
     gene            complement(864..2573)
                     /locus_tag="VF991_13720"
     CDS             complement(864..2573)
                     /locus_tag="VF991_13720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557552.1"
                     /translation="MTSKKRGGDKQAAPSQGPEVTSKNGHIVNRRTVLGTIGGGVVAA
                     ALGDRLWPLIRGSQAQTGASSVDMNRFNTGASGRPGFGTLGDYVFLSPTKLGGGAHAQ
                     DLQSGKTLAWIEYWNYGDSCPIAHHLAAYPSAEPRKGFEFVNSTQGGDNVLIYGLPTE
                     IKQHGLLEPIWGQGNHIYRVHYDGQQMNLIEDVSETTGIGLGVHTVIYPDATGFAAAD
                     GQKDVAAFFDRPPLPVLAKDDVAVGEMNKGQKTKVQMAFSADWIGRDRSGSMEANWFN
                     GGTLRITRLIKARETGLYDLRGSKGNKIDWEMVPMAEYLVYTGQLPGDAPRKLCGLDA
                     VVHHPGNRYSAMVIRMCSAALIMDRQSWEPVCCLHMPEGSPGNLPVKKVSSNPDTWEV
                     EFQDIKCVGHEAGFSPDGKFFTMMNNIRQNNMPVFDTSDPDPRNWKKITFVKDPSWVG
                     DYPSPFHLCFSMDRSKMFVSVLSPKPAKSAVVAVDTKTWQIIKKFENVGPDLQTMSVT
                     YDGKYVLQIFSGFQRLESGVFVFTQDTLEPVGYLPNFGGHHDCVVVPTRTEHLLNSRC
                     TTL"
     gene            complement(2677..3150)
                     /locus_tag="VF991_13725"
     CDS             complement(2677..3150)
                     /locus_tag="VF991_13725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEX9557553.1"
                     /translation="MNRRRFVLAALFALLAIPALALDYKLGAIEINHPWTRATPPTAQ
                     AGGGFLLLTNTGTTPDRLIAVKSPAADKVEIHEMKMDGNVMRMRELDKGIELPPGATV
                     ELKPGGFHIMFMGLKAPFAKDKKVPLTLVFEKAGSIDVELPVEAMGAGAPTPPKH"
     gene            complement(3162..3653)
                     /locus_tag="VF991_13730"
     CDS             complement(3162..3653)
                     /locus_tag="VF991_13730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEX9557554.1"
                     /translation="MRLSILLALLLSLASVCGAEAAGPLPFERESWAKLRASHAGQPT
                     VVHFWGLTCGPCLVELPHWGKLAADRRDLKLVLIAADPLPQEQERVLATLAAAGLANS
                     ESWSFTDRFYERLRYEIDPAWAGELPRTVMIDGDGKTTVLPGVANLAQVRAWLDAQAK
                     PSR"
     gene            complement(3650..>4549)
                     /locus_tag="VF991_13735"
     CDS             complement(3650..>4549)
                     /locus_tag="VF991_13735"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HEX9557555.1"
                     /translation="KGNLIVTFAIFQDQRFNGRAFFARSTDNGASFSRPQPLTADTTS
                     QRFETAAIDPAGRVFTAWLDKRNVATARAAGRSYPGAALAYAWSDGGASFAKTSIALD
                     NTCECCRLGIAFAGPGRPAIAFRNIFEGSIRDHSVVTFKDATTPGPLRRVSVDDWKLE
                     ACPHHGPSLAIAPDGSYHVAWFTDGKARKGLFYARADSADSAFGPPRALSSPDRQPAR
                     PYVLADGRALHLVWKEFDGTKAQVRWQVSRDGGRGWSEARTVADTDDASDHPLLVAHA
                     GRVYLSWLAKVQGYRLIPLEDQP"
BASE COUNT          777 a         1450 c         1546 g          776 t
ORIGIN      
        1 acaccgcgat gccgacgaac agcgtacgca gcgcttggcg cgacgacgtg agcacggaat
       61 tgccctcgac caccttcacg tccgggattt gcgagattgc aaacttcacc tgttcggcgc
      121 gcgccgtggg cgaaagctgc agcaggatcg ccgtaacctt gcccgcaaca tagtcgggca
      181 tgcacagggc catctcgttc ttgtgccggc tatggtcggc cgacacggcc ttcgctgctt
      241 tggccagttc cgggtcctga cggcacaggg ccgccaggaa atcgagcccg gcaaaggtga
      301 tgaagtagga ctcatcgaac gggccgacgc ctgttttggc gagccggccg taaatctcca
      361 tcggccggcg gcagacgctc aagctctcac cgaccgcacc aggcaggcgg cctcccgcca
      421 aaagctcgcc gaccccgatc ggtccctggc gctgctcgcg cagccaggtt tggacggtga
      481 aatcgaccgc cgggtcgaag gcgatcaggt tgacgccgcg tccttcgacg atcacccgta
      541 ccaggcgctg cggcgcggcg cgggcaatgc cgtcaatgcc ggcgatcttg gcgaccacgc
      601 cggcgtccag cgtttcgtcg gtcggctgca ccgtgagcag gctcgacgtg atgttcacca
      661 acgtgccgcg cggcaccacg acaagatcgg cgcccatgcg cgagaaggac gcagcgatgc
      721 catcgcccag cgcccagccg gtgatgaagc ttgccacgcc gacgccgacg gcgagcgcca
      781 ccgcgacgcc gaggaacagg gcgcgcagcc gccgccggcc gagattctgc gccgccaacc
      841 tgatcagcag catcggcgac ctactacagg gtggtgcagc ggctgttcag caggtgctcg
      901 gtcctggtcg gcacgacgac gcaatcgtga tggccgccga aattgggcag atagccgacc
      961 ggctccaacg tgtcctgggt gaagacgaag acgccgcttt ccaagcgctg gaagcccgag
     1021 aagatctgca gcacgtattt gccgtcgtag gtcaccgaca tggtttgcag gtcggggccg
     1081 acattctcga acttcttgat gatctgccag gtcttggtgt cgacggcgac gaccgcgctt
     1141 ttggctggct tgggcgagag caccgagacg aacatcttgg agcggtccat cgagaagcag
     1201 agatggaagg gactgggata gtcgccgacc cagctcgggt ccttcacgaa ggtgatcttc
     1261 ttccagttgc gcggatcggg gtcggaggtg tcgaacaccg gcatgttgtt ctgccggatg
     1321 ttgttcatca tcgtgaagaa cttaccgtcg gggctgaagc ccgcttcgtg gccgacgcac
     1381 ttgatgtcct ggaactcgac ctcccaggtg tcggggttgg agctcacctt cttgaccggc
     1441 agattgccgg gcgagccctc gggcatgtgc aggcagcaca ccggctccca gctctggcgg
     1501 tccatgatca gcgccgccga acacatgcgg atcaccatcg ccgaatagcg attgccgggg
     1561 tgatgaacga ccgcgtcgag cccgcagagc ttacgcggcg catcgccggg cagctggccg
     1621 gtgtagacca gatactcggc catcggcacc atttcccagt cgatcttgtt gcccttgctg
     1681 ccgcgcaggt cgtagagccc ggtctcgcgc gccttgatca ggcgggtgat gcgaagcgtg
     1741 ccgccgttga accagttggc ctccatcgag cccgaccggt cgcggccgat ccagtcggca
     1801 ctgaacgcca tctggacctt ggtcttctgg cccttgttca tctcgcccac cgccacgtcg
     1861 tccttcgcca gaaccggcaa cggcggacgg tcgaagaagg cagcgacatc cttctggccg
     1921 tcggcggcgg caaagcccgt agcgtcggga tagatcacgg tgtgtacccc gagcccgatg
     1981 ccggtcgtct ccgagacgtc ctcgatcagg ttcatctgct ggccgtcata gtgcacgcgg
     2041 tagatgtggt tgccctggcc ccagatgggc tcgagcaggc cgtgctgctt gatctcggtc
     2101 ggcaggccgt agatcagcac attgtcgccg ccctgcgtgg aattgacgaa ctcgaagccc
     2161 ttgcgcggct cggccgaggg ataggccgcg agatgatgcg cgatcgggca ggaatcgccg
     2221 tagttccagt actcgatcca ggccagcgtc ttgccactct gtagatcctg ggcatgcgcg
     2281 ccgccgccaa gcttggtggg cgacaggaag acgtagtcgc cgagcgttcc gaagcccggc
     2341 cggcccgacg cgccggtgtt gaagcggttc atgtcgaccg agcttgcgcc ggtctgcgcc
     2401 tggctgccgc ggatcaacgg ccacaggcga tcgccgagtg cggcggcgac gacaccgccg
     2461 ccgatggtgc ccagcaccgt gcggcgattg acgatatgcc cgtttttcga agtgacctcc
     2521 ggaccctgag acggcgcggc ttgcttgtct cctccacgtt tcttgcttgt catcgacgac
     2581 tccgtgcatc gcagaaaacg actacaggag tttattgtcg agtcagcagc cgtgccatgg
     2641 ggaaccgaaa cccgctgcgc atatctcagg ccgtcgtcaa tgcttgggcg gggtgggcgc
     2701 gcccgccccc atcgcctcga ccggcagttc gacatcgatg ctgcccgctt tctcaaagac
     2761 gagcgtgagc ggtaccttct tgtccttggc gaacggcgcc ttcagtccca tgaacatgat
     2821 gtgaaagccg ccaggcttca gctcgaccgt ggcgccgggc ggcagctcga tgcccttgtc
     2881 gagctcgcgc atgcgcatga cgttgccgtc catcttcatc tcgtggatct cgaccttgtc
     2941 ggcggccggg cttttcacgg cgatcaggcg gtcgggcgtc gtgccggtat tggtcagcag
     3001 caaaaagcca ccgccggctt gtgccgtggg cggtgtggcg cgcgtccagg gatgattgat
     3061 ttcgatggcg cccaatttgt agtcgagggc gagcgcgggg atggcgagaa gggcgaacaa
     3121 ggcggcgagg acgaagcggc ggcgattcat tgaagcaact cctagcgact gggtttggct
     3181 tgggcatcga gccaagcgcg gacctgagcg aggttggcga cgccgggcag gacggtggtc
     3241 ttgccgtcgc cgtcgatcat cacagtgcgc ggcagttcgc cggcccaggc cggatcgatc
     3301 tcgtagcgca gccgttcata gaaacggtcg gtgaagctcc agctctcgct gttggcgagc
     3361 ccggcggccg ccagggtcgc caacacgcgc tcctgctctt gcggcagcgg atcggcggcg
     3421 atcagcacca atttgagatc acggcgatcg gccgccagct tgccccagtg cggcagctcg
     3481 acgaggcaag gcccgcaggt aaggccccag aaatggacca cagtcggttg gccggcatga
     3541 ctggcgcgca gcttcgccca gctttcgcgc tcgaagggca gtgggccggc cgcctcggcg
     3601 ccgcagacgg aagcgaggct caacaacagg gcaagcagga tcgacagtct catggctggt
     3661 cctccagcgg gatcaggcga tagccctgga ccttggccag ccacgagaga tagacgcgcc
     3721 cggcatgggc gaccaacagc ggatggtccg aggcgtcgtc ggtatcggcg acggttcgcg
     3781 cctcgctcca gccgcggccg ccgtctcgcg agacctgcca gcggacctgt gccttggtgc
     3841 cgtcgaactc tttccagacg agatgcagcg cccgcccgtc ggcgagcacg tagggccgcg
     3901 ccggctggcg gtcgggcgag gacagagcgc gcggcgggcc gaacgctgaa tcggccgaat
     3961 cggcacgggc atagaagagt cccttgcgcg ccttgccgtc ggtgaaccag gcgacgtgat
     4021 aggaaccgtc gggcgcgatc gccaggctgg gaccgtgatg cgggcacgcc tccagcttcc
     4081 agtcatcgac gctgacgcgg cgcaaggggc cgggagtcgt ggcgtccttg aaggtgacga
     4141 cggaatggtc gcggatcgag ccctcgaaga tgttgcggaa ggcgatcgcc ggccgccccg
     4201 gtccggcgaa ggcgatgccc agccggcagc attcgcaggt gttgtcgagg gcgatgctcg
     4261 tcttggcgaa agaggcgcca ccgtccgacc aggcataagc cagtgccgcg ccggggtagg
     4321 accggccggc agcgcgggcc gtcgccacgt tgcgcttgtc gagccaggcg gtgaacaccc
     4381 ggccggccgg atcgatcgcc gcggtctcga agcgctggct ggtggtgtcg gccgtcagcg
     4441 gttgcgggcg gctgaagctt gcgccgttgt cggtcgagcg cgcgaagaac gcgcggccat
     4501 tgaagcgctg gtcctggaag atggcaaagg tcacgatcag gttgccctt
//
LOCUS       DASWGA010000583         4689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_190521, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000583 DASWGA010000000
VERSION     DASWGA010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4689
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190521"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            406..1917
                     /locus_tag="VF991_13740"
     CDS             406..1917
                     /locus_tag="VF991_13740"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX9557556.1"
                     /translation="MSNVSFADLGLAEPLLRALAAANYTVPTPIQARTIPALLQGRDV
                     LGVAQTGTGKTAAFALPVLQHLSAFRERAQPKSPRALVLAPTRELAVQIARSFDTYGR
                     GLGLRLCTVVGGLGYGRQIETLARGVDILVATPGRLLDLVERGNVKLGHVTFLVVDEA
                     DRMFDMGFIRDVRRIVGSVAKQRQTLLFSATMPGDVAKLASEILKNPERVEIAPQGQG
                     RAVDKIDQRVYFVNSATKRALLSHLLSDETLEKDIVFTRTKRGANRVAEALEDRGVVS
                     EAIHGNKSQNARQKALDNFSRGKARVLVATDLASRGIDVVGVTHVINYELPADAESYV
                     HRIGRTARAGASGIALSFCDSSERGQLKSIERLTNQRIAVISTPANEDMPAAPPMRPR
                     AERDERDEPRQHRGPGRSGGHGHRAFGDRSRGDRPPAQGEHQWPRGDYRDRRQGDRPQ
                     GDRPQGEQTYSARPRANRPYTPRPQGDRPFGGPPRGNGGRRFGGGGRGRGRSA"
     gene            complement(1914..2843)
                     /locus_tag="VF991_13745"
     CDS             complement(1914..2843)
                     /locus_tag="VF991_13745"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX9557557.1"
                     /translation="MPQSERHALVVGGGTMGVGIIAMFLGHGWKVDVVSRSAGTRDGL
                     PAACARALTAMGKPADTSALVTYATLPEASWPTIDLVVETVTEDLALKQKLFAEMETL
                     AKPDAALTSNSSSFPISQIGKGLKTQHRMMGLHFFMPAHLIPLVEVVRSVHTEPAQAE
                     RVGAIMSSLGKRPVQVKKDVIGFLGNRIQGALMREALWLIEQGVASPEDVDATVRLSF
                     GFRYAAAGPIVQKEHSGWDTTCAVAKIIWPDLTNADGPPPILQRNVDEGRIGFKTKRG
                     FFEWDDESIAKERARYERALRKCLEIFREEGIL"
     gene            2922..3695
                     /locus_tag="VF991_13750"
     CDS             2922..3695
                     /locus_tag="VF991_13750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9557558.1"
                     /translation="MSATYKDIGVSSEGHVGIVEIQRPPHNFFDNSLINQIADAFEAF
                     DRDMNIRAYVLCAQGKSFCAGADFANRPQTGAAESGKHLYKEATRLFRSKKPSVGAIQ
                     GPAIGGGLGLAVMPDFRVACPEARFSANFTRLGFHPGFSLTFTLPRLIGQQKANLMFY
                     TGRRIGGEEAHAWGLADVLVPLADVRKAAIALATEIAEGGPLAVQSTRETMRRGFADG
                     AEAATERELTEQDWTRKTEDFKEGVKSYAEKRVGNFKGR"
     gene            3836..4642
                     /locus_tag="VF991_13755"
     CDS             3836..4642
                     /locus_tag="VF991_13755"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX9557559.1"
                     /translation="MGQVSGKAAIVTGGASGIGEACAETLAREGAAVLVTDIDDALGK
                     AVVERIAKAGGKARYLRHDVRDEAAWPGVIGEAERSFGRLDIMVANAGIGIMSPIADM
                     SLADWQRQQAINLDGVFLSIKHAIPAMKKAGGGSIVLMSSIAGLRGAPGLAAYSATKG
                     GVRLLAKSVALEHAADNIRCNSVHPGIIATPIWGKIPTGADGNRRNAPIDPRERAAAV
                     VPLSRAGEAQDIANGVLFLCTEAASYMTGQELVIDGGMTAGGRPVQRPSS"
BASE COUNT          780 a         1624 c         1545 g          740 t
ORIGIN      
        1 ctgaagcaga agtgcgacgg catgcacgcc accatcgtca acggccaggt gctgctgcgc
       61 gacaacgagc cgaccggcaa cctgccgggc aagcttctgc gcaagaagcg gcactaagtc
      121 ttgccggagc gggccgggag gcccgcggtc cggcaagagg ctgccttagt accgtcactt
      181 gactttgctg cgccgcacca tcatatacgc gccagcccgc cagtttgcgg gctgaccaag
      241 gtttctcgcg atcgcgcgac gcgccccatt tcttgtgacg gcgcttcatc ccgagacaat
      301 cccccaaaca agagccgtcc cagccgcgcg cgggaacggg ccaaaagccg cccctatatg
      361 cgtgcccgag aggcacggtc ggcggccaaa aggattttat ttccagtgag taatgtttcg
      421 ttcgcggatc tcggcctggc cgagccgctg ctgcgtgccc tcgcggccgc caactacacg
      481 gtgccgacgc ccatccaggc gcgcaccatt ccggcgctgc tgcagggccg cgacgtcttg
      541 ggcgtcgccc agaccggcac cggcaagacc gccgccttcg cgctgcccgt gctgcagcat
      601 ctctccgctt tcagggagcg cgcccagccc aagagcccgc gcgcgctcgt gctggcgccg
      661 acccgcgagc tcgcggtcca gatcgcccgc agcttcgaca cctacggccg cggcctcggc
      721 ttgcgtcttt gcaccgtcgt cggcggcctg ggttatggcc gccagatcga gaccctggcg
      781 cgcggcgtcg acatcctggt cgccacgcca ggccgtctgc tcgacctggt cgagcgcggc
      841 aacgtgaagt tgggccatgt gacgttcctc gtcgtcgacg aggccgaccg catgttcgac
      901 atgggtttca tccgcgacgt gcgccgcatc gtcggctcgg tcgccaagca gcgccagacg
      961 ctcttgttct ccgccaccat gccgggcgat gtcgccaagc tcgcatcgga gatcctgaag
     1021 aaccccgagc gggtcgagat cgcgccgcag ggccagggcc gcgccgtcga caagatcgac
     1081 cagcgcgtct atttcgtgaa ctccgccact aagcgggcgc tgctcagcca ccttctgtcc
     1141 gatgagacgc tcgagaagga catcgtcttc acccgcacca agcgcggcgc caaccgcgtc
     1201 gccgaggcgc tggaagatcg cggcgtcgtc tccgaagcga tccacggcaa caagtcgcag
     1261 aacgcgcggc agaaggcgct cgacaatttc agccgcggca aggcccgcgt gctggtcgcc
     1321 accgatctcg cctcgcgcgg catcgacgtg gtgggcgtga cccacgtcat caactacgag
     1381 ctgccggccg acgccgaaag ctacgtccat cgcatcggcc gcaccgcgcg cgccggcgcc
     1441 tcgggcatcg cgctgtcgtt ctgcgacagc agcgaacgcg gccaactcaa gagcatcgag
     1501 cgcctgacca accagcgcat cgccgtcatc tcgacgccgg ccaacgagga catgccggcg
     1561 gccccgccga tgcgtccgcg ggccgagcgc gatgagcgcg acgagccgcg gcagcatcgc
     1621 ggccccggcc ggtccggcgg ccatggtcat cgcgcgttcg gcgatcgctc acgcggcgat
     1681 cgtccgccgg cacagggcga acatcagtgg ccgcgcggcg actatcgcga tcgccggcaa
     1741 ggcgaccgtc cccaaggcga tcgcccgcaa ggtgagcaga cttacagcgc ccgcccgcgt
     1801 gccaaccggc cttacacgcc gcgcccgcaa ggcgaccggc cgttcggcgg tccgccgcgc
     1861 ggcaatggcg gccgtcgctt cggcggtggc ggtcggggcc gtgggcgaag cgcctaaaga
     1921 atcccttcct cgcggaagat ttccaggcat ttgcgaagag cgcgctcgta ccgggcgcgc
     1981 tcttttgcaa tggactcgtc gtcccattcg aagaagccgc gcttggtctt gaagccgatg
     2041 cggccctcat cgacattgcg ctgcaggatc ggcggcggcc cgtcggcgtt ggtgaggtcg
     2101 ggccagatga tcttggccac ggcgcaggtc gtgtcccagc ccgaatgctc cttctgcacg
     2161 atcgggccgg cggcggcgta gcggaaaccg aagctcaacc gcaccgtggc gtcgacatcc
     2221 tccggcgagg ccacaccctg ctcgatcagc cacagggcct cgcgcatcag cgcgccctgg
     2281 atgcggttgc ctagaaagcc gatcacgtcc ttcttgacct gcaccggccg cttgccgagc
     2341 gacgacatga tcgcgccgac cctttcggcc tgcgcaggct cggtgtggac ggagcgcacg
     2401 acctcgacca gcgggatcag atgcgccggc atgaagaagt gcaggcccat catgcggtgc
     2461 tgcgtcttca gccccttgcc gatctggctg atcgggaagc tcgaggaatt ggacgtgagc
     2521 gcggcatcgg gcttggcgag cgtttccatc tcggcaaaca gcttctgctt caaggccagg
     2581 tcttcagtca ccgtctcgac gacaaggtcg atcgtgggcc acgacgcttc cggcagcgtg
     2641 gcatatgtca cgagagccga tgtatcggcg ggcttgccca tcgccgtgag ggcgcgcgcg
     2701 cacgcggcgg gcagcccgtc gcgcgttcca gccgagcgcg acaccacatc gactttccag
     2761 ccgtgtccca ggaacatggc gatgatgccc acgcccatgg tgcctccgcc gacgacgagg
     2821 gcgtggcgtt cgctttgcgg catttttcat cctcccaact cgacggatgc cccagcggcg
     2881 gggcaatatc gcggctcact tatagcccgt gggggaaatt tatgagcgcc acctacaagg
     2941 atatcggcgt cagcagcgag ggtcatgtcg ggatcgtcga gatccagcgc ccgccgcaca
     3001 actttttcga caattcgctg atcaatcaga tcgccgatgc cttcgaggcc ttcgaccgcg
     3061 acatgaacat ccgcgcctat gttctgtgcg cccagggcaa gtcgttctgc gccggcgccg
     3121 acttcgccaa ccgtccgcag accggcgcgg cggaaagcgg caagcacctc tacaaggaag
     3181 cgacccgcct gttccgttcc aagaaaccca gtgtgggagc gatccaaggg ccggcgatcg
     3241 gtggcggact gggcctcgcg gtgatgccgg acttccgcgt cgcctgcccg gaagcgcgct
     3301 tctcggcgaa cttcacgcgg ctcggcttcc atcccggctt ctcgctcact ttcaccctgc
     3361 cgcgcctgat cggccagcag aaggccaacc tgatgttcta taccggccgg cgaatcggcg
     3421 gcgaggaagc ccatgcctgg ggactggccg acgtgctggt gccgctggcc gacgtgcgca
     3481 aggcggcgat cgcgctcgcc accgaaatcg ccgagggcgg cccgctcgcc gtgcagtcga
     3541 cgcgcgagac catgcggcgg ggcttcgccg atggcgccga ggccgcgacc gagcgcgagc
     3601 tcaccgagca ggactggacg cgcaagaccg aggacttcaa ggagggcgtg aagtcctacg
     3661 ccgagaagcg cgtcggcaac ttcaagggcc ggtagcgcag cctgtcgtcc tgagcgaagc
     3721 gaaggacctc atggcctgtc aacgagcaca ccgctcgcca tcgtcatgag atccttcgct
     3781 gcgctcagga tgacaggttc cgtcgtcaat cggacttggg agcgagggta ctaacatggg
     3841 ccaggtttca ggcaaagccg ccatcgtcac cggcggcgcc tccggcatcg gcgaagcctg
     3901 cgccgaaacc ctggcgcgcg agggcgcggc ggtgctggtg accgacatcg atgatgcgct
     3961 gggcaaggcg gtcgtcgagc gcatcgcaaa agccggcggc aaggcgcgct atctgcggca
     4021 cgacgtgcgc gatgaggcag cgtggcccgg cgtgatcggc gaggccgagc ggagtttcgg
     4081 ccggctcgac atcatggtgg ccaatgccgg catcggcatc atgtcgccga tcgccgacat
     4141 gtcgctcgcc gactggcagc gccagcaggc gatcaatctc gacggcgtgt tcctgtcgat
     4201 caagcacgcc atcccggcga tgaagaaggc gggcggcggc tcgatcgtgc tgatgtcgtc
     4261 gatcgccggc ctgcgcggcg cgccggggct cgccgcctat tcggcgacca agggcggcgt
     4321 tcggctgttg gccaagtcgg tggcgctgga gcatgccgcc gacaacattc gctgcaactc
     4381 ggtgcatccc ggcatcattg ccacgccgat ctggggcaag atcccgaccg gcgccgatgg
     4441 caaccgccgc aacgcgccga tcgacccgcg cgaacgcgca gccgccgtcg tgccgctgag
     4501 ccgcgccggc gaggcgcagg acatcgccaa tggcgtgttg ttcctttgca ccgaggccgc
     4561 cagctacatg accggccagg agctggtgat cgacggcggc atgaccgcgg gtgggaggcc
     4621 ggtgcagcgt ccttcttctt agggtgtcct agagctttgg gtgacgttgg ctttgccgac
     4681 tccgctttg
//
LOCUS       DASWGA010000584         2502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_951175, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000584 DASWGA010000000
VERSION     DASWGA010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951175"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..420
                     /locus_tag="VF991_13760"
     CDS             <1..420
                     /locus_tag="VF991_13760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557560.1"
                     /translation="EPLDGILDLIFQAHAPTGAAGLGPFMVVEAILPVETGHPYKGVR
                     VRSSTNAVTLKTLPGYAETAAPKEDCAKCVGKYFVAKGANPPAGVAADNVVREADLAW
                     PLRIIKPTDGIPSYGFDPNRLTLVLSEDGRIVDAAWD"
     gene            568..837
                     /locus_tag="VF991_13765"
     CDS             568..837
                     /locus_tag="VF991_13765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557561.1"
                     /translation="MNTSLKAMVAVALFALPAAAFAQSSDAQYCKALVDKYEQYLDMS
                     SKRGQQPQGLDARAGVEKCKAGDPSGIPEIEKALKDAKYDLPPRT"
     gene            complement(900..1646)
                     /locus_tag="VF991_13770"
     CDS             complement(900..1646)
                     /locus_tag="VF991_13770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557562.1"
                     /translation="MSAVSVASIAFGLILLSIILGVVLRSWLPEADLGGDSKDVIRLA
                     TALIGTMSAVVLALLFASTRTSYETTNASVSHLTARLVELDHVLKEYGPEGEALRSTL
                     RQDVVAMIDSIWREDANLPTPTAPDVVVLHKVRQLAPANPQQASLQASGLAAGTDVEK
                     IRLTLLAQPPDSISKPFVTVLVLWLCFIFATFSMSAKANTTLIVVLFVCAFSASSAIY
                     LILELGQPFDGLMQIPNTGLRHALPPLSGT"
     gene            complement(1742..>2502)
                     /locus_tag="VF991_13775"
     CDS             complement(1742..>2502)
                     /locus_tag="VF991_13775"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX9557563.1"
                     /translation="FDKSERFWLANGQAATPPSMRLPLEVISVSSGFGLRADPFDQPP
                     PLAAIGKPAAMGGPTRKPLPPGLPTGGVSGNGSKINAATPLGASFGLEPYAGMKKAMT
                     AMTRGTGALFMHEGIDLVAPAGTPVYATADGVVVGAAPNGRYGNWIRIEHGAKLATVY
                     GHLMAFAPGIEPGESVVRGELIGFIGNTGRSTGAHLHFELQVDGKAVNPINHPELKAA
                     QLRGPELERFRKQVAHALQEREREAKVADTLAGL"
BASE COUNT          441 a          825 c          842 g          394 t
ORIGIN      
        1 gagccgctcg acggcatcct cgacctcatc ttccaggcgc acgccccgac cggcgccgcc
       61 ggcctcgggc cgttcatggt cgtcgaggcg atcctgccgg tcgagaccgg ccatccctac
      121 aagggcgtgc gggtgcgcag cagcaccaac gccgtgacct tgaagacgct gcccggctac
      181 gccgagacag cagcgcccaa ggaagactgc gccaagtgcg tcggcaaata cttcgtcgcc
      241 aagggcgcca atccgccggc tggcgtagcc gccgacaacg tcgtgcgcga ggccgacctg
      301 gcctggccgc tgcgcatcat caagccgacc gacggcattc caagctacgg cttcgatccc
      361 aaccgactga ccctcgttct gtccgaggac ggccgcatcg tcgacgcggc gtgggactga
      421 gcggtgcagg tgattacacc gagctgacgt cggttgtagc gccgaagaaa cttcgcgtcg
      481 tcaggccgac gtaacgcaaa ggccgcacgg cggcccattt cggcggccat ctctccgtcg
      541 ctcgatgatc gagcgatgga ggaaatcatg aacacttcct tgaaggccat ggtggccgtc
      601 gcgctgttcg cgctgccggc cgccgcattc gcccagtcga gcgatgcgca gtactgcaag
      661 gcgctggtcg acaagtacga gcagtatctc gacatgagct ccaagcgcgg tcagcagccg
      721 caaggcctcg acgcccgcgc cggcgtcgag aaatgcaagg cgggcgatcc ctccggcatt
      781 cccgagatcg agaaggcgtt gaaggacgcc aagtacgacc tgccgccgcg gacctgaagc
      841 ccagcgacga ccgttgacgc ccccgctcgg cctggccggg gggggcgccg catgcctggt
      901 catgttccgc tcagcggcgg cagcgcgtgg cgcaggccgg tgttggggat ctgcatcaac
      961 ccgtcgaacg gctggccgag ctcgagaatg agatagatcg cgctcgacgc ggagaaggcg
     1021 cagacgaaca acacgacgat cagggtggtg ttggccttgg ccgacatgct gaaggtggcg
     1081 aagatgaagc aaagccacag caccagcacg gtgacgaacg gcttggagat cgaatcgggg
     1141 ggctgggcga gcagagtcag ccggatcttc tcgacgtcgg tgccggccgc gaggccgctg
     1201 gcctgcaggc tggcctgctg cggattggcc ggcgccagtt gccgtacctt gtgcaacacc
     1261 accacatccg gcgcagtcgg ggtcggaagg ttggcgtcct cgcgccagat cgagtcgatc
     1321 atggcgacca cgtcctggcg caaggttgag cgcaaggcct cgccctccgg cccgtattcc
     1381 ttcagcacgt ggtcgagctc gacgagccgc gccgtcaagt ggctgacact ggcgttggtc
     1441 gtctcgtagg acgtgcgtgt cgaggcgaac aacagcgcca gcacgaccgc cgacatggtg
     1501 ccgatcagcg cggtcgccag acggatcacg tccttggaat cgccgccgag gtcggcttcc
     1561 ggcagccacg aacgcagcac cacgcccagg atgatgctca acaggatcag gccgaaggca
     1621 atcgacgcga cggaaacagc actcaacttg ttctcccccg ttctaccggg ggcagtatag
     1681 accaatcgtg tggggaagac cgcttagggc agctaggcga gttatgacag cattttttcg
     1741 actagagccc tgccaaagtg tcggcgactt tggcctctcg ctcgcgctct tggagcgcgt
     1801 gcgcgacctg cttgcgaaag cgttccagct cgggtccgcg caactgcgcg gccttgagct
     1861 ccggatgatt gatgggattg accgccttgc cgtcgacctg gagctcgaag tgcaggtgtg
     1921 cgccggtcga gcggccggta ttgccgataa agccgatgag ctcgccgcgc accacgcttt
     1981 cgcccggctc gatgcccggc gcgaaggcca tgagatggcc gtacaccgtg gcgagctttg
     2041 cgccgtgttc gattcggatc cagttgccgt agcggccgtt gggggctgcg cccaccacca
     2101 cgccgtcggc ggtggcatag accggcgtgc cggccggcgc cacgagatcg atgccctcgt
     2161 gcatgaacaa cgcgccggtg ccccgtgtca tcgccgtcat cgccttcttc atgccggcat
     2221 aaggctccag tccaaatgaa gcgccgagcg gcgtcgcggc gttgatcttc gagccgttgc
     2281 cgctgacgcc gccggtcggc aggccgggcg gcaagggctt gcgcgtggga ccacccatcg
     2341 ccgcgggctt gccgatcgcg gcgagcggcg gcggctggtc gaacggatcg gcgcgcaacc
     2401 cgaagcccga cgacaccgag ataacctcga gcggcaggcg catcgagggc ggcgttgccg
     2461 cctggccgtt ggccagccag aagcgctcgc tcttgtcgaa gc
//
LOCUS       DASWGA010000585         1573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1456419, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000585 DASWGA010000000
VERSION     DASWGA010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1456419"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1121
                     /gene="leuC"
                     /locus_tag="VF991_13780"
     CDS             <1..1121
                     /gene="leuC"
                     /locus_tag="VF991_13780"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEX9557564.1"
                     /translation="GIKLFDLGEPGQGIVHVMGPEQGVTLPGTLLVCGDSHTCTHGGM
                     GAIAFGIGATEVIHVLATQSLVQPKPKRMRVTFDGKRAPGVTPKDMILHLIGQIGAAG
                     GTGYAVEYDGSAIRDMEVEGRLTVCNLSIELGAKIGMVAPDDVTFKFLEGRPYAPKGA
                     LWNHAVADWRSLASDPDAVFDAEVTVDVAKIVPQITWGTSPEHVIAVTDKIPDPASAG
                     DPDKQKAMQAALDYMGLTAGVPIQETKVDWVFIGSCTNSRLSDLRDAATIARGRKVAG
                     HVRAWVVPGSENIKRQAEAEGLDRVFLDAGFEWREPGCSMCLAVNGDTIAPGERSVST
                     SNRNFVGRQGPGGRTHLASPAMAAAAAIAGRIADVRSI"
     gene            1138..>1573
                     /gene="leuD"
                     /locus_tag="VF991_13785"
     CDS             1138..>1573
                     /gene="leuD"
                     /locus_tag="VF991_13785"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR00171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEX9557565.1"
                     /translation="MEAFTVLDAKAAPLMRQNVNTDIIIPIHRLRDVAQAELGPYAFE
                     PWRYLPDGSENPEFFMHQPAYRGAEIVVADNNFACGSSREGAVWAMMGMGVRCVIAPS
                     FGPIFFNNCFQNGVLPIQETKVDWVFIGSCTNSRMSDLRDAAQ"
BASE COUNT          268 a          558 c          513 g          234 t
ORIGIN      
        1 ggggcatcaa gctgttcgat ctcggcgagc ccggccaggg catcgttcat gtcatgggac
       61 cggagcaggg cgtcaccctg ccgggcaccc tgctggtgtg cggcgacagc cacacctgca
      121 cccatggcgg catgggcgcc atcgccttcg gcatcggcgc caccgaggtg atccacgtgc
      181 tggcgacgca atcgctggtc cagcccaagc ccaagcgcat gcgcgtgacc ttcgacggca
      241 agcgggcacc cggcgtcacg cccaaggaca tgatccttca cctcatcggc cagatcggcg
      301 cggccggcgg caccggctat gccgtcgaat acgacggcag cgccatccgc gacatggagg
      361 tcgaaggccg gctcaccgtc tgcaatctct cgatcgagct cggcgccaag atcggcatgg
      421 tggcgcccga cgatgtcacc ttcaaattcc tggagggccg gccctatgcg cccaagggcg
      481 cgctgtggaa ccacgccgtc gccgactggc gctcgctggc cagcgacccc gacgcggtgt
      541 tcgacgccga ggtgacggtc gacgtcgcca agatcgtgcc gcagatcacc tggggcacca
      601 gccccgagca tgtcatcgcg gtcaccgata agatccccga cccggcctcg gccggcgatc
      661 ccgacaagca gaaggccatg caggccgcgc tcgactacat gggacttaca gccggcgtgc
      721 cgatccagga gaccaaggtc gactgggtgt tcatcggctc gtgcaccaat agccggctca
      781 gcgacctgcg cgacgccgcg accatcgccc ggggccgcaa ggtagcgggt cacgtgcggg
      841 cctgggtcgt gccgggttcg gagaacatca agcgccaggc cgaggccgag ggcctcgacc
      901 gcgtctttct cgacgccggc tttgaatggc gcgagccggg ctgctcgatg tgcctcgcgg
      961 tgaacggcga cacgattgcg cccggcgaga ggagcgtgtc gacctccaac cgcaacttcg
     1021 tcggccgcca gggaccgggc gggcgcaccc atctcgccag ccccgccatg gccgcggccg
     1081 ctgccatcgc cggccgcatc gccgacgtgc ggtcgatctg aacgggagga acgaaccatg
     1141 gaagccttca ccgttctcga cgccaaggcc gcccccttga tgcggcagaa cgtcaacacc
     1201 gacatcatca tcccgatcca ccgcttgcgc gacgtggcgc aggccgagct cggcccctac
     1261 gccttcgagc cgtggcgcta cctgcccgac ggcagcgaga atccggaatt cttcatgcac
     1321 cagccggcct atcgcggggc agagatcgtc gttgccgaca acaacttcgc ctgcggctcg
     1381 agccgcgagg gcgcggtgtg ggcgatgatg ggcatgggcg tgcgctgcgt catcgcgccc
     1441 tccttcgggc cgatcttctt caacaactgc ttccagaacg gcgtgctgcc gatccaggag
     1501 accaaggtcg actgggtgtt catcggctcc tgcaccaaca gccggatgtc ggatctgcgc
     1561 gatgccgccc aga
//
LOCUS       DASWGA010000586         2248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1711692, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000586 DASWGA010000000
VERSION     DASWGA010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1711692"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..467)
                     /locus_tag="VF991_13790"
     CDS             complement(<1..467)
                     /locus_tag="VF991_13790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX9557566.1"
                     /translation="MAVEVKVPALGESVTEATVAKWLVKAGDAVAIDQPLCELETDKV
                     TVEVNATVAGTIVDLAVPEGTTVQVGGVLCHIEAGAAGAAAAKPAAAPAAAPAAAPPA
                     PKPAPAPAPAPAPVPAPTAAPAANIAASGPATRKLVEETGVAAAAIQPTGKDGR"
     gene            complement(483..>2248)
                     /locus_tag="VF991_13795"
     CDS             complement(483..>2248)
                     /locus_tag="VF991_13795"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013950124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEX9557567.1"
                     /translation="HGDAAFAGQGLVAESLDLSDLSGYRIGGTIHFVVNNQIGFTTLP
                     TAARSGPYCTEVAKIVQAPILHVNGDDPEAVVHVSRIATEFRQRFKRDIVIDMFCYRR
                     HGHNESDEPMFTQPLMYKEIAGHKTVKEVYAARLEAEGVVTPAEVAQLDGELRAKLDR
                     ALEASGQYKANKADWLEGRWAGLTTAPGEEDRKGTTAVETEQLQAVGRALTEVPKNFD
                     LNRKIARQLQEKRKTIETGKDIDWATGEALAWGTLLAEGTPVRLSGQDSARGTFSQRH
                     SVLIDQTSEAQYVPLNHVAESQARFEVIDSPLNEAAVLGFEYGYSSAEPNALVLWEAQ
                     FGDFANGAQLIIDQFISSGESKWLRMNGLVMLLPHGYEGQGPEHSSARLERYLQLSAE
                     DNWQVVMPTTPANYFHALRRQMRRSFRKPLVVMTPKSLLRHKEAVSTLADFGPATSFR
                     RILAETEQLAEAAKIRRIILCSGKVYFDLLAERRKRKLDDIAILRIEQLYPFPFSSLG
                     AELSRYPHAEVVWCQEEPENMGAWSFVDRRIERALAGLNVKATRAVYIGRPEAASTAT
                     GSARTHVKEQTDLVGRALTLA"
BASE COUNT          326 a          749 c          784 g          389 t
ORIGIN      
        1 cggccgtcct tgccggtggg ctggatcgcc gcggcggcaa cgccggtctc ttccaccagc
       61 ttgcgcgtgg ccggtccgga cgcggcgata ttggcggccg gcgccgcagt cggtgcaggg
      121 acgggcgccg gcgcgggcgc aggagccggt gcaggtttcg gcgcaggagg cgccgcagca
      181 ggggctgctg ccggcgcagc cgcgggcttg gctgcggcag cgccggcggc gcccgcctcg
      241 atatggcaga gcacgccgcc cacctggacg gtggtgcctt cgggcacggc aagatcgacg
      301 atggtgccgg ccaccgtggc gttcacctcg acggtgacct tgtcggtctc gagctcgcac
      361 aacggctggt cgatcgcgac agcgtcgccc gccttcacca gccacttggc gacggtcgcc
      421 tcggtgaccg attcgcccaa cgccggaacc ttgacttcga cggccatgac caaaatcctc
      481 cgtcaggcca gcgtcagcgc gcggccgacc aggtcggtct gttccttgac atgggtgcgc
      541 gccgagccgg tggcggtcga cgccgcttcc ggccggccga tatagaccgc ccgcgtcgcc
      601 ttgacgttga ggccagcgag cgcgcgctcg atgcggcggt cgacgaacga ccacgcgccc
      661 atgttctcgg gctcctcctg gcaccacacc acttcggcat ggggatagcg ggaaagctcc
      721 gcgcccaagc tgctgaaggg gaagggatag agctgctcga tgcgcaggat ggcgatgtcg
      781 tcgagcttgc gtttgcgccg ctcggccaaa agatcgaagt agaccttgcc cgagcacagg
      841 atgatgcgac ggatcttggc tgcctcggcg agctgctcgg tctccgccag gatgcggcgg
      901 aacgaggtag ccggaccgaa atcggccagg gtcgagacgg cctccttgtg gcgcagcagc
      961 gacttcggcg tcatcaccac caaaggcttg cggaacgacc ggcgcatctg gcggcgcagc
     1021 gcgtggaaat aattggcggg cgtcgtcggc atgacgacct gccaattgtc ctcggcggag
     1081 agctgcaggt agcgctcgag ccgggccgag ctgtgttccg gcccctgccc ctcgtagccg
     1141 tgcggcagca gcatcaccag gccgttcatg cgcagccact tgctttcgcc cgaggagatg
     1201 aactggtcga tgatcagttg cgcgccgttg gcgaagtcgc cgaactgcgc ctcccacagg
     1261 accagggcat tgggctcggc cgacgaatag ccgtactcga agcccagcac ggccgcctcg
     1321 ttgagcgggc tgtcgatgac ttcgaagcgt gcctggctct cggccacgtg gttcagcggc
     1381 acgtactggg cttcgctggt ctggtcgatc agcaccgaat ggcgttgcga gaaggtgccg
     1441 cgggcggaat cctgtccgga gagccgcacc ggcgtgcctt cggccagcag ggtgccccac
     1501 gccagcgcct cgccggtcgc ccagtcgatg tccttgccgg tctcgatggt cttgcgcttc
     1561 tcctggagct ggcgggcgat cttgcggttg aggtcgaaat tcttcggcac ctcggtgagc
     1621 gcgcggccga cggcctggag ctgctcggtc tcgaccgccg tcgtgccctt gcggtcctcc
     1681 tcgcccggcg ccgtggtgag gccggcccag cgaccctcca gccagtcggc cttgttggcc
     1741 ttgtactggc ctgacgcctc gagcgcccgg tcgagcttcg cgcgcaattc cccgtcgagc
     1801 tgcgccacct ctgctggggt gaccacgcct tcggcctcga gccgcgcggc atagacctcc
     1861 ttcacggtct tgtggccggc gatctctttg tacatcagcg gctgggtgaa catcggctcg
     1921 tccgattcgt tgtgcccgtg ccggcgatag cagaacatgt cgatgacgat gtcgcgcttg
     1981 aagcgctggc ggaattcggt ggcgatgcgc gagacatgga ccacggcttc cggatcgtcg
     2041 ccgttcacgt gcaggatcgg cgcctgcacg atcttggcga cctccgtgca atacggcccc
     2101 gagcgcgcgg cggttggcag ggtggtgaag ccgatctggt tattgaccac gaaatggatg
     2161 gtgccgccga tgcggtagcc gctgagatcg ctgagatcga ggctctcggc caccagcccc
     2221 tggccggcga atgccgcgtc gccgtgca
//
LOCUS       DASWGA010000587         4694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_700464, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000587 DASWGA010000000
VERSION     DASWGA010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4694
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_700464"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..2155)
                     /locus_tag="VF991_13800"
     CDS             complement(44..2155)
                     /locus_tag="VF991_13800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin oxidoreductase family protein"
                     /protein_id="HEX9557568.1"
                     /translation="MSPDDHAYAPATRGKSAESGVTIVPSVCPHDCTSTCALDVERLD
                     AKRIGRVRGSLRNDYTAGVICEKVARYAERIHHPDRLMKPLRRVGPKGSRQFAEISWT
                     DALDIVAEQFIAKARQHGNETVWPYYYAGTMGLVQRDGINRLRHAMKYSRYFSTICVT
                     LSDTGWMAGVGAKRGADVREVDEHSELVVIWGGNPVNTQVNVMTHAMRAKKRGAKLVV
                     VDPYRTGTAEQADIHLAVRPGTDGALAVAVMHVLFKEGYADWDYMRRYTDAPDELAAH
                     VATRTPEWASKITGLGVEEIVSFARLYGRTKASFIRCHHGFSRSRNGAANMHAVTCLP
                     AVTGAWKHKGGGALYGHTGMYPLNRTLIEGLDVVDPAIRDLDQSRLGPILTGDREALK
                     DGPPVTALLIQNTNPAMVCPELELVHRGFKREDLFTCVHEQFLTETAAFADIVLPATM
                     FLEHDDFYTASGHTFFQVTKAVIEPPGECRENHYVIAELAKRLGAKHRGFDMTPWEIM
                     DETLKVSGMWDAETNWKKGGQDFHLGFETSHFLDGFAWPDKKFRFKPDWAAYGPRGKD
                     MPSLPDHFDVIDNATPDKPFRMVAAPARTFLNSTFTETPSSQKREVRPTALMNPDDCA
                     AMGVAEGDRLEIGNERGKTIVHARPKAGQQKGVVVVEGIWPNRNFETGMGINALTSAD
                     PGWPHGGAVFHDTAVWIRKAA"
     gene            2213..3841
                     /locus_tag="VF991_13805"
     CDS             2213..3841
                     /locus_tag="VF991_13805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008552634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9557569.1"
                     /translation="MIPRGVPYEEAMRKFRWPKLKRFNIGRAVCERHPQEALALIVEN
                     ADGSVRNWTFGQLLAASSRLANALIAQGIHKGDRVGVFLSQGAELTLCHLAGYRMGAV
                     VLPLFTLFGEEALEYRMANAEASALITDMAQLPKVLAVRDRLPHLKTVIVIGAGKHDT
                     AFLDWDRLLAASSDNFATVDTAAEDPALLIYTSGTTGQPKGALHAHRVMLGSVPPVEQ
                     WLSHWPQGNEVMWTPAEWAWIAGLYDALFPAWFYGTPVVAHRFAKFDPERAFALLERH
                     KVGVGFIPPTALKMMRQVARPRDRWRYEVRAICTGGEAMGEELLAWGRDTFGTTISEG
                     YGQTEMNLMLLNSPDWFEVRPGSCGRACPGRKVAIVDSEGNVLPTGEEGQIAGWRHDP
                     IVMLEYWRNPEATERKYAGDWLLTGDLGRIDEQGYVFFKSRDDDVITSGGYRIGPGEI
                     EECLMKHPAVAMVGVVGVPDSLRTEIVKAFVQLRPEIAASEALKGDLAQFVKTRLAAH
                     EYPREVEFVAELPLTTTGKIMRRELRRWDAERKA"
     gene            complement(3845..3991)
                     /locus_tag="VF991_13810"
     CDS             complement(3845..3991)
                     /locus_tag="VF991_13810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557570.1"
                     /translation="MFIQVHSYRTDRHNAFSRLADWWPAALIGLVALLGALPDASART
                     LLGL"
     gene            complement(4164..>4694)
                     /locus_tag="VF991_13815"
     CDS             complement(4164..>4694)
                     /locus_tag="VF991_13815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557571.1"
                     /translation="SFASLRGTLAIVPQEPVLFTASVTENIRYGRPDASEAAVHAAAE
                     AASALAFIEALPQGFATDLGARGVRLSGGQRQRIAIARALLCDPAILLLDEATSALDA
                     ESELAVQQALDRLMHKRTTLVIAHRLATVQKADRIVVIDHGRVVDVGRHSDLVRRDGL
                     YARLAELQFNLAAAAS"
BASE COUNT          783 a         1503 c         1593 g          815 t
ORIGIN      
        1 gtctgggcga tgctcggatt gggcgccggt tggaacgcgc tgttcacgcc gctttgcgga
       61 tccagacggc ggtgtcgtgg aacaccgcgc cgccgtgcgg ccagccggga tcggccgagg
      121 tcagcgcgtt gatgcccatg ccggtctcga agttgcgatt gggccagatg ccttcgacca
      181 cgaccacgcc cttctgctgg ccggccttgg gccgcgcgtg cacgatggtc ttgccgcgct
      241 cgttgccgat ctccagccgg tcgccctcgg cgacgcccat cgccgcgcag tcgtcgggat
      301 tcatcagggc ggtcggccgc acctcgcgct tctggctgct cggcgtctcg gtgaaggtcg
      361 agttcaggaa ggtgcgcgcc ggtgcggcaa ccatgcggaa cggcttgtcc ggcgtggcat
      421 tgtctatgac atcgaaatgg tcgggcaggc tcggcatgtc cttgccgcgc ggaccgtagg
      481 ccgcccagtc gggcttgaag cggaatttct tgtcgggcca ggcaaagccg tcgaggaaat
      541 gcgacgtctc gaagccgaga tgaaaatcct ggccgccctt cttccaattg gtctcggcgt
      601 cccacatgcc cgagactttt agcgtttcgt ccatgatctc ccagggagtc atgtcgaagc
      661 cgcgatgctt ggcgcccagg cgcttggcga gttcggcgat cacatagtgg ttctcgcggc
      721 actcgccggg cggctcgatc accgccttgg tcacctggaa gaaggtgtgg ccgcttgcgg
      781 tgtagaaatc gtcgtgctcg agaaacatcg tggccggcag cacgatgtcg gcgaaggccg
      841 cggtctcggt taaaaactgc tcgtgcacgc aggtgaacag gtcctcgcgc ttgaagccgc
      901 gatgcaccag ctcgagctcc gggcagacca tcgccgggtt ggtgttctgg atcaaaagcg
      961 ccgtcaccgg cgggccatcc ttcagcgcct cgcgatcgcc ggtcaggatc ggcccgagcc
     1021 gcgactggtc gagatcgcgg atggcgggat cgaccacgtc gagcccttcg atcagggtcc
     1081 tgttcagcgg atacatgccg gtatggccat agagcgcgcc gccgcccttg tgtttccagg
     1141 cgccggtcac cgccggcagg caggtgacgg catgcatgtt ggcggcgccg ttgcggctgc
     1201 ggctaaaacc gtgatggcag cggatgaacg aggccttggt ccggccgtag agccgggcga
     1261 aggagacgat ctcctcgacg ccaagcccgg tgatcttaga cgcccattcc ggcgtgcgcg
     1321 tcgcgacatg agccgccaac tcgtccggcg cgtcggtgta gcggcgcatg taatcccagt
     1381 cggcgtagcc ctccttgaag aggacgtgca tgaccgcgac cgccagcgcc ccgtcggtgc
     1441 cgggccgcac cgcgagatgg atgtcggcct gctcggccgt gccggtgcgg taggggtcga
     1501 ccacgaccag cttggcgccg cgtttcttgg cgcgcatggc gtgggtcatg acgttgacct
     1561 gggtgttcac cggattgccg ccccagatca ccaccagttc ggaatgctcg tcgacctcgc
     1621 gcacgtcggc gccgcgcttg gcgccgacgc ccgccatcca gccggtgtcg gagagcgtca
     1681 cgcaaatggt cgagaaatag cgcgagtatt tcatcgcatg gcgcaggcgg ttgatgccgt
     1741 cgcgctgcac caggcccatc gtgccggcat agtagtaggg ccacaccgtc tcattgccat
     1801 gctggcgcgc cttggcgatg aactgctcgg ccacgatatc gagggcatcg gtccacgaga
     1861 tctcggcgaa ctgcctggat cctttcggcc cgacccgccg caacggcttc atcagccggt
     1921 cgggatggtg gatgcgctcg gcgtagcggg cgaccttttc gcagatcacg ccggccgtgt
     1981 agtcgttgcg cagcgagccg cgcacccggc cgatgcgctt ggcatccagc cgttcgacgt
     2041 cgagcgcaca ggtgctggtg caatcgtgcg ggcagaccga gggaacgatg gtgacgcctg
     2101 actcggcgga cttgccgcgc gtcgccgggg cgtaggcatg gtcgtcgggg gacatgccgc
     2161 agaatacctc cgctggaagc ggatggtcca cctgccatag agtgccgccg tcatgatccc
     2221 ccgcggtgtt ccctacgaag aggcgatgcg gaaattccgc tggcccaagc tgaaacgttt
     2281 caacatcggc cgggccgtgt gcgaacgcca tccgcaagag gcgctggcgc tgatcgtcga
     2341 gaacgccgac ggatcggtgc gcaactggac cttcggccag cttctcgcgg cgagctcgcg
     2401 gcttgccaat gcgctcatcg cgcagggtat ccacaagggc gatcgggtcg gcgtgttttt
     2461 aagccagggt gccgagctca cgctctgcca tcttgccggc taccgcatgg gcgccgtcgt
     2521 cttgccgctg ttcacgctgt tcggcgaaga ggcgctggaa taccggatgg ccaacgccga
     2581 ggcctcggcg ctgatcaccg atatggccca gcttcccaag gtgctggcgg tgcgcgatcg
     2641 cctgccccat ctcaagacgg tgatcgtgat cggcgccggc aagcacgaca ccgcctttct
     2701 cgactgggat cggctgctgg ccgcgtcatc cgacaacttc gccaccgtcg acacggcggc
     2761 cgaggatccg gccttgctga tctacacgtc gggcaccacc ggccagccca agggcgcgct
     2821 gcatgcccat cgcgtgatgc tgggctcggt gccgccggtc gagcagtggc tgagccattg
     2881 gccgcaaggc aacgaggtga tgtggacacc ggccgaatgg gcatggatcg ccggcctcta
     2941 tgacgcgctc tttcccgcct ggttctacgg cacgccggtg gtggcgcacc gcttcgccaa
     3001 gttcgatccc gaacgcgcct tcgcgctctt ggagcggcac aaggtcggcg tcggattcat
     3061 tccgccgacc gcgctgaaaa tgatgcggca ggtcgcgagg ccgcgcgatc gctggcgcta
     3121 cgaggtgcgc gccatctgca ccggcggcga ggcgatgggc gaggagttgc tggcgtgggg
     3181 ccgcgacacc ttcggcacga ccatctcgga aggctacggc cagaccgaga tgaacctgat
     3241 gctgctgaat tcccccgact ggttcgaggt ccggccgggc tcgtgcggcc gcgcctgtcc
     3301 cgggcgcaag gtcgccatcg tcgacagcga gggcaatgtg ctgccaaccg gcgaggaagg
     3361 ccagatcgcc ggctggcggc acgaccccat cgtcatgctg gaatactggc gcaatcccga
     3421 agcgacggag cgtaaatatg ccggcgactg gctgctgacc ggcgatctcg gccgcatcga
     3481 cgagcagggc tatgtcttct tcaagagccg cgacgacgac gtcatcacct cgggcggcta
     3541 tcgcatcggc ccgggcgaga tcgaggaatg cctgatgaag catcccgccg tcgccatggt
     3601 cggcgtggtc ggcgtgcccg acagcctgcg caccgagatc gtgaaggcct tcgtgcagct
     3661 taggcccgag atcgccgcca gcgaggcatt gaagggcgac ctggcccagt tcgtgaagac
     3721 ccggctggcc gcgcacgaat atccgcgcga ggtcgaattc gtggccgagt tgccgctcac
     3781 cacgacgggc aagatcatgc gccgcgagtt gcggcgctgg gacgctgaac gaaaagcctg
     3841 agcgtcagag gccgagcagg gttcgcgcgc tggcgtccgg cagggcgccc agaagcgcca
     3901 caagaccgat caaagcggcc ggccaccagt cggccagacg gctaaacgcg ttgtgccggt
     3961 cggttcgata ggaatgaact tgaataaaca tggctggctc ttcgggtaat cgccaaaatg
     4021 gcagcaatat ggcttaagat tacgcaatat catgctgata tacaaggcaa ttatggccaa
     4081 acttaaagta tcacattaag aagcattgcg ggcagaattc gcctgcaatt ttctcctgtt
     4141 ttcaacgact tgcgagaaaa atctcagctc gcggccgcgg cgagattgaa ctgcagctcg
     4201 gccaggcggg catagaggcc gtcgcgccgc accagatcgc tgtgacggcc gacatcgacc
     4261 acccggccgt ggtcgatcac cacgatccgg tcggcttttt gcaccgtcgc cagccgatgg
     4321 gcgatcacca gggtggtccg cttgtgcatg agccggtcga gcgcctgctg cacggccagt
     4381 tcgctttcgg cgtcgagcgc gctggtcgcc tcgtcgagca gcaggatggc gggatcgcag
     4441 agcagcgcgc gggcgatggc gatcctctgg cgttggccgc ccgacagtcg cacgccgcgc
     4501 gcgccgagat cggtggcgaa gccctgcggc agcgcctcga tgaaggcgag cgccgacgcc
     4561 gcctcggcag cggcatgcac cgcggcctct gacgcgtccg gtcggccgta gcggatgttc
     4621 tcggtgaccg aggcggtgaa cagcaccggc tcctgcggca cgatggcgag cgtgccgcgc
     4681 aagctggcga agct
//
LOCUS       DASWGA010000588         2383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1711820, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000588 DASWGA010000000
VERSION     DASWGA010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1711820"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /locus_tag="VF991_13820"
     CDS             complement(<1..424)
                     /locus_tag="VF991_13820"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9557572.1"
                     /translation="MGKLDGKITIVTGATSGIGRRTVEIFVKEGAKVVATGRREALGR
                     TLEQSLGKDKCVFVKADATQEADVKAMIDACLSKWGRLDCLFNNAGGPAPVGGIETVP
                     VEGFDAAMATLVRSVMLGMKHAAPVMMRQGSGSIINNGS"
     gene            482..1354
                     /locus_tag="VF991_13825"
     CDS             482..1354
                     /locus_tag="VF991_13825"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HEX9557573.1"
                     /translation="MTVLGILGGSGVYEMAGLKNAAWRRIASPFGETSDEFLFGVLDG
                     LDVVFVPRHGRGHRHSPTSINYRANIDALKRAGVTDILSLSACGSLREDLPPGHFVVV
                     DQFIDRTFARDKSFFGDGLVAHVSMAHPTCSRLAQVVHDCARTAGFPIKLGGTYLVME
                     GPQFSSLAESRLYRSWSCDVIGMTNMPEAKLAREAEICYVTVAMVTDFDCWHPDHDDV
                     QVSDIVRVLLDNAEKAKALVAMVVPRLKESRPSPCPAGCDRTLDHALITAPAARSPAM
                     IAKLDAVAGRVLKP"
     gene            complement(1359..2120)
                     /locus_tag="VF991_13830"
     CDS             complement(1359..2120)
                     /locus_tag="VF991_13830"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEX9557574.1"
                     /translation="MANRLLGVISALPEEFAHLSDQSGGATEIGGLLFWRGQIAGREA
                     VFVESGAGKVNAGVATALLLDRFGCRALMMCGVAGGLDPALGVGDVVIGTSHTQHDYG
                     AQKEDSFRTIQPGSRPSLGDDWRPGYLVAAPLVARLREALEGLVLEPLPEAVGVGPRT
                     PAVHYGAILTGDSFVNSERTRRRLHEQFGAHAVEMEGGAVAQVARRWGDDIAFVNVRC
                     LSDLAGAESHLDFRAFLPVASRYASQVAHRLAPVI"
     gene            2127..>2383
                     /locus_tag="VF991_13835"
     CDS             2127..>2383
                     /locus_tag="VF991_13835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008128862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEX9557575.1"
                     /translation="MGYKVAASNAMESVPELPSYQTLRQTCTEIAREAAREIMRIYAG
                     DHGVRDKADKSPVTDADHAAEAIIVAGLRALTPAMPIVAEE"
BASE COUNT          398 a          842 c          755 g          388 t
ORIGIN      
        1 cgctgccgtt gttgatgatg ctgcccgagc cctgccgcat catgaccggc gcggcatgct
       61 tcatgcccag catcaccgag cgcaccagcg tcgccatcgc ggcatcgaag ccctcgaccg
      121 gcacggtctc gatgccgccc accggcgccg gaccgccggc attgttgaac aggcagtcga
      181 ggcggcccca ttttgagaga caggcgtcga tcatcgcctt gacgtcggct tcctgcgtgg
      241 cgtcggcctt cacgaacaca cacttgtcct tgcccaagga ctgctcgagc gtgcggccca
      301 gcgcctcgcg ccgacctgtc gccaccacct tggcgccctc cttgacgaag atctcgacgg
      361 tgcgccggcc gatgccgctg gtcgcgccgg taacgatggt gatcttgccg tcgagcttgc
      421 ccatggatgt ctccctttta cctgggagga atgatacacc accgccaacg aggtgaagca
      481 gatgacggtg ttgggtattc tgggcggcag cggtgtctac gaaatggcag ggctcaagaa
      541 cgcagcgtgg cgcaggatcg cctcgccgtt cggcgagaca tccgacgaat tcctgttcgg
      601 cgtgctggac gggctcgacg tcgtgttcgt tccccggcat ggccgcggcc accgtcattc
      661 gccgacctcg atcaactacc gggcgaacat cgatgctttg aagcgcgccg gcgtcaccga
      721 catcctgtcg ctgtcggcct gcggatcgct gcgcgaggat ttgccgcccg ggcattttgt
      781 ggtggtcgat caattcatcg accgcacctt cgcgcgcgac aagagcttct tcggcgacgg
      841 gctggtggcg cacgtctcga tggcgcatcc gacctgcagc cggctggccc aggtcgtcca
      901 tgactgcgcg cgcacggcgg gctttcccat caagctcggc ggcacctatc tggtgatgga
      961 aggaccgcaa ttctccagcc tcgccgaatc gcgcctgtac cggagctgga gctgcgatgt
     1021 catcggcatg accaacatgc ccgaggccaa gctcgcccgc gaggcggaga tttgctacgt
     1081 gaccgtcgcc atggtcaccg atttcgactg ctggcacccc gatcacgacg atgtgcaggt
     1141 ctccgacatc gtgcgcgtgc tgctcgacaa tgccgagaag gccaaggccc tggtcgccat
     1201 ggtcgtgccc cgcctcaagg agtcgaggcc gagcccttgc ccggccggct gcgaccgcac
     1261 gctcgaccat gcgctgatta ccgcccctgc cgcgcgatcg ccggccatga tcgccaagct
     1321 cgatgccgtc gccgggcgcg tgttgaagcc gtgagtcttc agatcaccgg cgccagccgg
     1381 tgcgcaacct gcgaggcata gcgcgaggcg accggcagga aggcgcggaa atcgagatgg
     1441 ctctcggcgc cggcgaggtc gctgaggcag cgcacgttga cgaacgcaat gtcgtcgccc
     1501 cagcgccgcg cgacctgcgc caccgcgccg ccctccatct cgacggcgtg cgccccgaac
     1561 tgctcgtgca gccgccgccg ggtgcgctcc gaattgacga agctgtcgcc ggtcaggatc
     1621 gcaccgtaat gcacggcagg cgtccttggc ccgacgccaa cggcctccgg caacggttcc
     1681 agcacgaggc cctccaacgc ctcgcgcagg cgtgccacca gcggcgcggc cacaaggtag
     1741 ccgggccgcc aatcatcgcc cagcgacggc cggctgccgg gctggatggt gcggaaactg
     1801 tcctcctttt gagcgccata gtcgtgctgc gtgtggctgg tgccgatcac gacatcgcct
     1861 acgcccagag ccggatcgag gccgcccgcc acgccgcaca tcatcagcgc gcgacagccg
     1921 aagcgatcga gcaatagcgc ggtggcgacg cctgcgttga ccttgccggc gcccgattcg
     1981 acgaataccg cctcacggcc ggcgatctgg ccacgccaga aaagcaggcc gccgatctct
     2041 gtcgcgccgc ccgactggtc ggagagatgc gcgaactctt ccggcagggc agatatgacc
     2101 cctaaaagcc tgtttgccat ggatgaatgg gctataaggt cgccgcctcc aacgcaatgg
     2161 aatccgtgcc cgagctgccc tcctaccaga ccttgcgcca gacctgcacc gagatcgccc
     2221 gcgaggcggc gcgcgagatc atgcgcatct atgccggcga ccacggcgtg cgcgacaagg
     2281 ccgacaagag tcccgtcacc gacgccgatc atgccgccga ggcgatcatc gtcgccggcc
     2341 tgcgcgcgct cacgcccgcc atgccgatcg tcgccgagga gga
//
LOCUS       DASWGA010000589         3453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_314662, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000589 DASWGA010000000
VERSION     DASWGA010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3453
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314662"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(232..855)
                     /locus_tag="VF991_13840"
     CDS             complement(232..855)
                     /locus_tag="VF991_13840"
                     /inference="COORDINATES: protein motif:HMM:NF012920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HEX9557576.1"
                     /translation="MIKSGRKPVDIARRLKISESAVSQWFSKDTGPKSIRLAELAAFL
                     NTSVEYLITEPQGPAALGQPHSSPPFVPGGGERPDLAVYASAAGGPEGAWVMSGDAIA
                     WIHRDTRLVGVRDAFACYVVGDSMFPAYEQGNLLLVNPAVPPNAGDDCLFVQETPDSQ
                     RHALVKRLVRFNATSWTVKQWNPDKTFSLPRRDWQRALLVIGKYNRG"
     gene            968..1546
                     /locus_tag="VF991_13845"
     CDS             968..1546
                     /locus_tag="VF991_13845"
                     /inference="COORDINATES: protein motif:HMM:NF027273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/CI family transcriptional regulator"
                     /protein_id="HEX9557577.1"
                     /translation="MTYPALHKARAAAGGSYNDLARLLGVTASAISQWKNQERVPLKR
                     ALQIEALTAGQVTKEELRPDVFLDPAMSKAGIDVALECFPQPEAWLGGRQEGDASPLV
                     RSRAAIVSACRRLMRAGLFRPSVRECCLWAECPVQVGVGLFKTIEILHLEAADDAATR
                     DAIVERVVGDEQVALPLETLNRIVRAVVMGAG"
     gene            1684..2550
                     /locus_tag="VF991_13850"
     CDS             1684..2550
                     /locus_tag="VF991_13850"
                     /inference="COORDINATES: protein motif:HMM:NF018785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1376 domain-containing protein"
                     /protein_id="HEX9557578.1"
                     /translation="MTASGTWMAFYVGDYVKNTLKLTTRQHGAYLLLILACWQDGGSV
                     DGDDETLATITKLSMKDWLRDRPKLAPYFEATAQKWTHRRVVDELLEAARLTRERSSA
                     GQRGAAKRWQRHGGAMAGPLASARQNDAPSPSPSPSLSDSPEARASRARLIPEDWQPA
                     DADLAALRTERPDVVGEVYERRLRDFRDWCRAKAVTSHDIASTWRSFMRRTDAPKEAT
                     RRFNGAQPAEHRPSIRMAGPACLWKVRLSGYRPGDSWKYEGDPPGGANCKVPAELIGH
                     WRTYVRELEAAG"
     gene            2876..3106
                     /locus_tag="VF991_13855"
     CDS             2876..3106
                     /locus_tag="VF991_13855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557579.1"
                     /translation="MKYYPDWDDRCSEVLRRNAQGYTNNEIAILIEAATGKRFSVSVV
                     SRRRASLGLDCTNRNDWSAPIKRWQVTRQRPR"
     gene            3188..>3453
                     /locus_tag="VF991_13860"
     CDS             3188..>3453
                     /locus_tag="VF991_13860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011160347.1"
                     /note="molecular chaperone; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HEX9557580.1"
                     /translation="MDVSGAASETHPFQAEVAELLNLVVHSVYSETDIFLRELISNAS
                     DACDKLRYEAIARPELLAGDDRLAIRIKPDKASGTLTISDSGIG"
BASE COUNT          605 a         1167 c         1154 g          527 t
ORIGIN      
        1 ctgtacaagc ggtcgtcgcc ttatagcgag cgacccgaca caatgagcgt atcggagtac
       61 cagcgcggga tcatcacaac gcgcaaacgc tggcggccct tcgtcgtcgc gttgtacagc
      121 ctgggcggcg ccctggttgg ctgtgcggtg ctgttggcga tcgctgcaag aggctgagcg
      181 ccgatcgaat cgcctgcggc aaggcgacgg ccggcccgat cggcgatggc actatccccg
      241 attgtacttg ccgatcacca gcagggcgcg ctgccagtcg cggcgcggca ggctgaaggt
      301 cttgtccggg ttccactgct tgacggtcca cgacgtcgcg ttgaagcgga ccaggcgctt
      361 gaccagggcg tggcgctggc tgtcgggcgt ctcctggacg aacaggcagt cgtcgccggc
      421 gttgggcggc accgccggat tgaccagcag caggttgccc tgctcatagg ccgggaacat
      481 cgaatcgccc acgacatagc aggcgaaggc gtcgcgcacg ccgaccagcc gggtgtcgcg
      541 atggatccag gcgatggcgt cgcccgacat cacccaggcg ccctccggac cgccggccgc
      601 cgaggcatag accgcgaggt ccggccgctc gccgccgccc ggcacgaagg gcggcgaaga
      661 gtgcggctgc cccagggccg ccgggccctg cggctcggtg atcaggtact cgaccgaggt
      721 gttgaggaac gccgccagct ccgccagacg gatggatttc gggccggtgt ccttggagaa
      781 ccactgcgac accgccgatt cgctgatctt gagacgccgc gcgatgtcga ccggcttcct
      841 gccggacttg atcatcgccg tctcgattcg cctgccaatg cccattgtta agacatacta
      901 aaaagcacca atggacgcta tcaaagtttt actagacaat accggaagtc acacttattg
      961 tacccctatg acctatcccg ctctccacaa ggcccgcgcc gccgccggcg gcagctacaa
     1021 cgatctggcg aggctgctcg gcgtcaccgc ctcggccatc agccaatgga aaaaccaaga
     1081 aagggtgcca ttgaagcgcg ccctccagat cgaggccctc accgcgggcc aggtcacgaa
     1141 ggaggagctc cgtcccgacg tgttcctcga ccccgcaatg tcgaaggcgg ggatcgatgt
     1201 cgccctcgaa tgttttccac agcccgaggc ttggctcggt ggccggcagg agggcgatgc
     1261 cagcccgttg gtccgctcgc gcgccgcgat cgtgtcggcg tgccggcggc tgatgcgggc
     1321 cggcctgttc cggccgtcgg tgcgggagtg ctgcctgtgg gccgagtgtc cggtccaggt
     1381 cggcgtcggc ctcttcaaga ccatcgagat cctccatctc gaggcggccg acgatgccgc
     1441 gacccgcgac gccatcgtcg agcgggtggt cggcgacgag caggtggcac ttccgctcga
     1501 gaccctgaac cggatcgtcc gcgcagtcgt gatgggagcg ggttgaatgc tccggcgcgt
     1561 ccttggccat cgccttcgtc gttcctgcgg ttccgacgcc tcctcccttc gtcgccgcag
     1621 gacagggccg acggctctgt cccctcgccg tcggcccacc cttttttccg cgggccgccg
     1681 gcgatgacgg catccggcac ctggatggcg ttctacgtcg gcgactacgt gaagaacacg
     1741 ttgaagctca cgacgcgcca gcacggcgcc tacctgctgc tgatcctggc ctgctggcag
     1801 gacggcggct cggtcgacgg cgacgacgag acgctggcga ccatcaccaa gctctcgatg
     1861 aaggactggc tgcgcgatcg gcccaagctc gcgccttact tcgaggccac ggcgcagaaa
     1921 tggacccatc gccgggtcgt cgacgagctt ttggaggcgg cgaggctcac ccgggagcgc
     1981 agcagcgccg gacagcgggg ggcggcgaag cgctggcaga ggcacggcgg agccatggca
     2041 gggccattgg caagtgcacg gcaaaacgat gcaccctcac catcaccgtc accatcactg
     2101 tctgactctc ctgaagcgcg cgcgagccgg gcaagattga tcccggaaga ctggcagccc
     2161 gccgacgcgg accttgcggc attgcgcacg gagcggcccg acgtcgtggg cgaggtctac
     2221 gagcgccgcc tgcgcgactt ccgcgactgg tgccgggcca aggccgtgac cagccacgac
     2281 atcgccagca cctggcgctc cttcatgcgg cggaccgatg cgcccaagga agcgacgcgg
     2341 cgcttcaatg gcgcccagcc ggccgagcat cgacccagca tccgcatggc tgggcccgcg
     2401 tgcctgtgga aagtgaggct gagcggctat cggccgggcg attcctggaa gtacgagggc
     2461 gatccgccgg gcggcgccaa ctgcaaggtg ccggccgagc tgatcggcca ttggcgcacc
     2521 tacgtgcgcg agctcgaggc ggcgggttga tgggcgggag aaatcccacc tgctgccgat
     2581 gcggcaaact gaaggagcgc atcgagacca cgtactgccg ggcgtgccac gcgatgcgcg
     2641 tcaggcaatg gcgcagaacg catccgctga cgccggagga acgcaagaag gagaacgcga
     2701 ggtcgttcgc gcgagtctat cggaagcgcg ggaggctgcg ccagaagccc tgccggcatt
     2761 gcggcgacgc caagagcgag tgccaccacc ccgactatgc gcggccgctg ttcgtgatct
     2821 ggctgtgccg gccgtgccac ctcaggctcc acgccgccaa acgcaggagg cagcgatgaa
     2881 atactatccc gactgggacg accgctgcag cgaggtcctg cgccgcaatg cccagggcta
     2941 caccaacaac gagatcgcga tcctgatcga ggcggcgacc ggcaagcgct tcagcgtttc
     3001 cgtcgtcagc cgacggcggg cgtcgctcgg gctcgactgc acgaaccgca acgactggag
     3061 cgcgccgatc aagcgatggc aggtcacccg ccagcggcca cgctaagcgg cttgccgggc
     3121 ccttgccggt cgttcaccgt tcattatatc catcgccggc tcaatccaac ccggcgcgag
     3181 gagaacgatg gacgtgtcag gcgcagcgag cgaaacccac cccttccagg cggaggtcgc
     3241 cgaactcctg aacctggtgg ttcattcggt ctattccgag accgacatct tcctgcgcga
     3301 gctgatctcc aacgcctcgg acgcttgcga caagctgcgc tacgaggcga tcgccaggcc
     3361 cgagctgctg gcgggcgacg acaggctcgc gatccgcatc aagcccgaca aggcgagcgg
     3421 cacgctgacg atttccgaca gcggcatcgg cat
//
LOCUS       DASWGA010000590         2069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_191092, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000590 DASWGA010000000
VERSION     DASWGA010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191092"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="VF991_13865"
     CDS             <1..516
                     /locus_tag="VF991_13865"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEX9557581.1"
                     /translation="WRGLRAASLRYFNATGADAAGEIGEAHDPETHLLPLAVDAALGL
                     RPSLVVHGSDYPTEDGSCVRDYVHVTDLADAHLRAVRWLVGRKAGRGCHNAFNLGSGT
                     GYSVRQVVESIGRVVGRPVPHVYGARRPGDSPRLVGHIGKAQRELGWTPARGLEAQIE
                     DTVRWRRSMRR"
     gene            complement(544..1647)
                     /locus_tag="VF991_13870"
     CDS             complement(544..1647)
                     /locus_tag="VF991_13870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557582.1"
                     /translation="MDWRPISADSHITEPPGCYVDNIDPAWREKAPHVVNKDGMGDIY
                     VVDGMKTPVPMGLIAAAGVAPQDIRIGGAKFDDLHRGGWDPATRLADQDKDGVAAEII
                     YPTVGMLICNHPDFDYKKACFDAYNRWLKAYCDHAPDRLIGMGQTAVRTVKEGIDDLE
                     RIKAMGFRGVMMPGNPGEKDYDDPAFDPFWQAAVALELPLSFHILTSSGDNSLSKPRG
                     PKINGFLSIIRGCQDIMGMLVFSGVFERHPGLRVVCVEADAGWAPHFMYRMDHAYKRH
                     RYWMKGQELKRLPSEYFRDHIALTFQDDWTAFQFADRLGPHQLMWASDFPHSDSTWPW
                     SQDVIAEQTAHLSPELKKRILRDNVVELYKLTA"
     gene            1796..1870
                     /locus_tag="VF991_13875"
     tRNA            1796..1870
                     /locus_tag="VF991_13875"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1828..1830,aa:Thr,seq:ggt)
BASE COUNT          325 a          690 c          695 g          359 t
ORIGIN      
        1 tggcgcggcc tgcgcgcagc ctcgctacgc tacttcaacg ccaccggcgc ggacgccgcc
       61 ggcgagatcg gcgaggcgca cgatccggaa acgcacctgc tgccgttggc ggtcgacgcc
      121 gccctgggct tgcgcccgtc gctggtcgta cacggttcgg actatccgac cgaggacggc
      181 tcgtgcgtgc gcgactatgt ccatgtgacc gacctcgccg acgcccatct gcgcgccgtg
      241 cggtggcttg tcggccggaa ggccggccgg ggctgccata acgccttcaa cctcggctcc
      301 ggcaccggct acagcgtcag gcaggtcgtc gagtcgatcg gccgcgtggt gggtcggccg
      361 gttccccatg tctacggcgc ccgcaggccc ggcgattcgc cgcggctggt gggccatatc
      421 ggcaaggcac agcgcgagct cggctggacg cccgcgcgcg gcctcgaagc ccagatcgaa
      481 gacaccgtgc gctggcgccg gtcgatgagg cgctgaggcg catcctctca atgatgcagg
      541 gggtcacgct gtcaatttgt acagctcgac gacgttgtcg cgcaggatgc gcttcttcag
      601 ctcgggcgac agatgcgccg tctgctcggc gatgacgtcc tggctccacg gccaggtcga
      661 atcgctgtgc gggaagtcgg acgcccacat gagctggtgc gggccgagcc ggtcggcgaa
      721 ctgaaaggcc gtccagtcgt cctggaaggt gagcgcgatg tggtcgcgga aatattccga
      781 cggcaggcgt ttcagctcct ggcccttcat ccagtagcgg tggcgcttgt aggcgtggtc
      841 catgcgatac atgaagtgcg gcgcccagcc ggcgtcggcc tcgacgcaga ccacgcgcag
      901 cccgggatgg cgctcgaata cgccggagaa gaccagcatg cccatgatgt cctggcagcc
      961 gcggatgatc gacaggaagc cgttgatctt gggcccgcgc ggcttgctca gactattgtc
     1021 gccgctcgag gtcaaaatgt ggaacgacag cggcagctcg agcgcaacgg cggcttgcca
     1081 gaacgggtcg aaagccggat cgtcataatc cttctcgccg ggattgcccg gcatcatcac
     1141 gccgcgaaag cccatcgcct tgatgcgctc gagatcgtcg atgccttcct tgacggtgcg
     1201 caccgccgtc tgccccatcc cgatcaggcg atccggcgca tggtcgcaat aggcttttag
     1261 ccagcggttg taggcgtcga agcaggcctt cttgtagtcg aagtcgggat ggttgcagat
     1321 cagcatgccg accgtgggat agatgatctc ggccgccacg ccatccttgt cctggtcggc
     1381 aagccgggtg gcgggatccc agccgccgcg atgcaggtcg tcgaatttcg cgccccctat
     1441 gcggatgtcc tggggcgcca ctccggccgc ggcgatcagg cccatcggca ccggcgtctt
     1501 catgccgtcg acgacgtaga tgtcgcccat gccgtccttg ttgacgacat gcggcgcctt
     1561 ctcacgccac gccggatcga tgttgtcgac atagcagccg ggcggctcgg tgatgtggga
     1621 atcggcggat atcgggcgcc agtccattgg cttgctccag gccttgcttt gtcgaaaggg
     1681 taggcagagc ccaagtgccg cggcaagccg ccatggcacg cccgtttcgg ccggcggcag
     1741 cggttgaacg ggctcctgcc ctatggcata ccccgccgct ctaaagccaa gtagcgctgc
     1801 cgtagctcag tggtagagca cccccttggt aagggggagg tccacagttc aatcctgtgc
     1861 ggcagcacca gcctttccag cgccgacaac aaagggcccg caccgacgct gccgggcggg
     1921 cctcgacccc cgccggtaca tccgcggctc gaggtcggtt ggaacgtcat gctccggcga
     1981 cacaacgccc ggccgccgct tcggttccgg gcgtcgagcc gccgtcgcgt cgcctcagtt
     2041 gcgcgtgaag ccctcgagct cgttggccg
//
LOCUS       DASWGA010000591         4854 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1457242, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000591 DASWGA010000000
VERSION     DASWGA010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4854
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1457242"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..820
                     /locus_tag="VF991_13880"
     CDS             <1..820
                     /locus_tag="VF991_13880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HEX9557583.1"
                     /translation="GRLSAAVRQEAAVPAIVAVGRGRILIGLNEADLQRIAEARDVAK
                     ISSREIAPFLASGRMGATTVASTMACAHLAGIRVFATGGIGGVHRGAESTFDISADLD
                     EFARTPMAVISAGAKAILDLPKTLEYLETKGVPVLGYGTNTFPAFFCRSSGLPLQLRC
                     DTPDEVASVLLMQDRLGFGMGTLIANPIPEEHALPEQEIEAAIAHALSAAESQGITGK
                     EVTPYLLARLVKLTKGRSLAANMALAEHNAKVAAQIAAAYARQRVQAAASKQHP"
     gene            989..2239
                     /locus_tag="VF991_13885"
     CDS             989..2239
                     /locus_tag="VF991_13885"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557584.1"
                     /translation="MRVRFLAYVLVPVVALATLFGAQSPAADPKPIKIGLLYSLSGMA
                     AVYTKGTVIGHQIAAEEINAAGGLLGGRKIEYVIRDDKLKPGIAVDEFRRMVTRDEVD
                     FVMGVISSGVALAVSEVAKEMKVLFVDTIAQTAALTEEQGHDYVVRLNTNSVILGRTA
                     ALAAAKGPWKNYYFIGPDYEWGHRVNADFWEYLQTKKPGVAKMGDLWPKLGERDFSAH
                     ITAILNAKPEAVFTSLWGGDLIAFIKQANAYGFFDKVQFIATGAGDLDILEPLGAEMP
                     NGILATFLYAFDYLPTKQAQNEKFIEEFKKRAGYLPKSGDIIGYVSTYIMAEAIKKAG
                     STDSAKLGAALRGSRYETLLGDITVRDFDGQATFPYNIGITFTDPKYPFKRLKDVTRA
                     NGEDVLQSKEEIEKIRAEYKKKGG"
     gene            2370..3263
                     /locus_tag="VF991_13890"
     CDS             2370..3263
                     /locus_tag="VF991_13890"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557585.1"
                     /translation="MANLTADVLFVQFMNGLFIAAGIYLVSSGLSLVFGVLGILNFAH
                     GSFYMYGAFFVFALIGYKFGGFWPALLIAPAVVVILGVATEILFLRPIYKADPLYQLL
                     LTYGLVLMFGDVVKLIWGADNQSVARPAGLEGTIPILGALFPSYQMFVLLPIGVVTMV
                     ALYLLLNHTQIGNVVRAATQDREMVGALGVNVRLLYTGVFAVGAFLGGLGGAVLAPMG
                     ALYPGMDFDIIIEVFLVVVLGGLGSMAGTALGALIYGELKSLGILFVPDLESLFIYVL
                     MVIVLLTRPQGLLGKRVETSR"
     gene            3282..4727
                     /locus_tag="VF991_13895"
     CDS             3282..4727
                     /locus_tag="VF991_13895"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557586.1"
                     /translation="MASLHDSIRGETTAPRRLATARDPMMWAFLAALALLFWLPELIL
                     SMGWAKFWIQFATQVLIWSLFAVSFNLLMGYAGMVSFGQAAYLGIGGYTAGLLLKNIA
                     GLPFWIGLVAAPVGGALGALIIGYFCVRRTHIYFAILTLAFGHIVYLIAFKWYSFTGG
                     DNGLIGIPVPDWITEPTFANYYKFVLVICLAAIYLLWRIVNSPFGKTLTAIRENPERA
                     DFVGVPVDRYRLYAFVVVGAFSGLAGALIMANERSVHPDLAHWTQSTQVLLMTLLGGV
                     YTFFGPVVGALLLRTMDADITQNYPEIWQLFLGGVLVLILFGLPGGVMGFLQERDVGS
                     GDDQATRTAKLLRLFRRKSWMFFLGALFFTTFFSILHSPGAWLLPRGREFSVFALTSW
                     GIVPCALLQLVVGAAVLALLLRRADRFNRIDGMLLLALPVAALALHIHLGTPLSGLLI
                     VLLWIIFTLYSLGQPEFRRAYHLGRPAADGG"
BASE COUNT          766 a         1585 c         1563 g          940 t
ORIGIN      
        1 cgggcggctc tcggcggctg tccgacagga ggcggcggtt ccggcgatcg ttgctgtcgg
       61 ccgcgggcgg attctgatcg ggctcaacga ggccgacctg cagcgcatcg ccgaagcccg
      121 cgatgtcgcc aagatctcca gtcgggaaat cgcccctttc ctggcgtcgg gaagaatggg
      181 cgcgacgacg gtcgcctcca ccatggcctg cgctcatctc gccggcatcc gcgtgttcgc
      241 caccggcggc atcggcggcg tccatcgcgg tgcggagagc accttcgaca tctcggccga
      301 tctcgacgaa ttcgcgcgca cgcccatggc ggtgatctcg gccggcgcca aggcgatcct
      361 cgatctgccc aagacgctcg aatatctcga gaccaagggt gtgccggtgc tcggctatgg
      421 caccaacacc tttccggcct ttttctgtcg ttccagtggg cttcctcttc aattgcgctg
      481 cgacacgccg gacgaggttg cttccgtcct gctgatgcag gacaggctgg gatttggcat
      541 gggcaccctg atcgccaacc ccattcctga agagcacgcc ctgccggagc aggagatcga
      601 agccgcgatc gcccacgcgc tgtcggcggc cgagagccag ggcatcactg gcaaagaggt
      661 gacgccctac ctcctcgcca ggctggtcaa attgaccaaa gggcggagtc tcgcggccaa
      721 catggccctg gcagagcaca acgccaaggt cgccgcgcag atcgcggcgg cctatgcgcg
      781 gcaaagagtc caagccgcgg cctcgaagca gcacccttga ggtgagcgcg cttcgagtta
      841 tcgaccttgc gagattgatg ctgacctgtg caagatcgac cttgtaccgc ttcataacaa
      901 tagcccgccc cagacggcgg cgcccggtta gcggcgtaac gcttgcgtgg atttgagttg
      961 agtcccgaac aataaaaggg aggcaaccat gcgcgtgcgt tttttggcct acgttctcgt
     1021 ccctgttgtt gcgttggcga cgctgttcgg tgcgcagtcg ccggccgccg atccaaagcc
     1081 gatcaagatc ggcttgcttt attcgctgtc aggcatggcc gccgtgtaca ccaaaggcac
     1141 ggtgatcggc catcagatcg ccgcggagga gatcaacgct gccggcggcc tgctgggtgg
     1201 ccgcaagatc gaatacgtca tccgcgacga caagctgaag ccgggcatcg cggtcgacga
     1261 gttccgccgc atggtgaccc gcgacgaggt cgacttcgtc atgggcgtga tcagctccgg
     1321 cgtggcgctg gccgtctcgg aagtggcgaa ggagatgaag gtgctgttcg tcgacaccat
     1381 cgcccagacc gcggcgctga ccgaggaaca gggccacgac tacgtcgtgc gcctcaacac
     1441 caatagcgtg atactgggcc gcacggcggc gctggccgcg gccaagggcc catggaagaa
     1501 ctactacttc atcggccccg attacgaatg gggccatcgc gtcaatgccg acttctggga
     1561 gtacctgcag accaagaagc ccggcgtggc caagatgggc gacctgtggc ccaagctcgg
     1621 cgagcgggac ttctcggcgc acatcaccgc catcctgaat gccaaacccg aggcggtgtt
     1681 cacctcgctg tggggcggcg atctcatcgc cttcatcaag caggccaacg cctacggctt
     1741 cttcgacaag gtgcagttca tcgccaccgg tgccggcgac ctcgacatcc tggagccgct
     1801 gggtgcggag atgcccaacg gcatcctggc caccttcctc tatgccttcg actacctgcc
     1861 caccaagcag gcgcagaacg agaagttcat cgaggagttc aagaagcggg cgggctacct
     1921 gccgaagtcc ggcgacatca tcggctacgt gtcgacctac atcatggcgg aggcgatcaa
     1981 gaaggcgggc tccaccgaca gcgccaagct cggcgccgcg ctgcgcggct ccaggtacga
     2041 gaccctgctg ggcgacatca cggtgcgtga cttcgacggc caggcgacgt tcccgtacaa
     2101 catcggtatc accttcaccg atcccaagta tcctttcaag cgactgaagg acgtgacccg
     2161 cgccaacggc gaggacgtgc tgcagtccaa ggaagagatc gagaagatac gcgccgaata
     2221 caagaagaag ggcgggtagg cacacctcac cctgaggggc atcgcaaagc gatgcgtctc
     2281 gaaaggtggg ccgcagactc gctggcggct catgcttcga gacgcgccct tcgggcgctc
     2341 ctcagcatga ggccaaacag gagcgcggga tggccaatct caccgccgat gtccttttcg
     2401 tccagttcat gaacggcttg ttcatcgccg ccggcatcta cctggtgtcg tcggggcttt
     2461 cgctggtgtt cggcgtgctc gggatcctca acttcgcgca cggctcgttc tacatgtacg
     2521 gcgcgttctt cgtgttcgcc ctgatcggct ataagttcgg cggcttctgg ccggccctgc
     2581 tgatcgcgcc ggctgtcgtg gtgatcctgg gtgtcgccac cgaaatcctc ttcttgcggc
     2641 cgatctacaa ggccgacccg ctttaccagc tgctgctgac ctacggcctg gtgctgatgt
     2701 tcggcgacgt ggtgaagctg atctggggcg ccgacaatca atcggtggcg cggccggcgg
     2761 gactcgaggg caccatcccg atcctcggcg ccctgttccc gagctaccag atgttcgtgc
     2821 tgctgccgat cggcgtcgtc accatggtgg cgctctacct gctgctcaac cacacccaga
     2881 tcggcaacgt cgtgcgcgcg gcgacgcagg atcgcgagat ggtgggcgcg ctcggcgtga
     2941 acgtgcgcct gctctacacc ggcgtgttcg ccgtcggcgc cttcttgggc ggcctgggag
     3001 gcgccgtcct ggcgccgatg ggcgcgctct atccgggcat ggacttcgac atcatcatcg
     3061 aggtcttttt ggtcgtggtg ctgggcggcc tcggcagcat ggccggaacg gcgctcggcg
     3121 ccctgatcta cggcgagttg aagtcgcttg gcatcctgtt cgtgcccgac ctcgaatcgc
     3181 tgttcatcta tgttctcatg gtgatcgtgc tgttgacgcg gccgcagggt ctgctcggca
     3241 agcgcgtcga gaccagccgc taaggagtcg ggaggcgttc agtggcaagc ctgcacgact
     3301 cgatcagggg agagaccacc gcgccgcgtc ggctggccac ggcgcgcgat ccgatgatgt
     3361 gggcgtttct ggcggcgctg gcgctgttgt tctggctgcc cgagctgatc ctctccatgg
     3421 gctgggccaa gttctggatc cagttcgcga cccaggtgct catctggtcg ctgttcgcgg
     3481 tgtcgttcaa tctgctgatg ggctacgccg gcatggtctc gttcggccag gccgcttatc
     3541 tcggcatcgg cggctacacg gcgggccttc tgctgaagaa catcgccggg ctgccgttct
     3601 ggatcggcct ggtggcggcg ccggtgggcg gcgcgctggg ggcgctgatc atcggttact
     3661 tctgcgttcg ccgcacgcac atctatttcg ccatcctgac cctggccttc ggacacatcg
     3721 tctacctgat cgccttcaag tggtattcct tcaccggcgg cgacaacggc ctgatcggca
     3781 tccccgtgcc cgattggatc accgagccga ccttcgcgaa ctactacaag ttcgtgctcg
     3841 tgatctgcct tgcggcgatc tatctcttgt ggcgcatcgt caactcgccg ttcggcaaga
     3901 ccctcaccgc catccgcgag aaccccgagc gcgccgactt cgtcggtgtg ccggtcgacc
     3961 gctatcggct gtatgccttc gtcgtggtcg gcgctttctc cggcctggct ggcgcgttga
     4021 tcatggccaa cgagcgcagt gtccaccccg acctcgcgca ttggacccag tcgacgcagg
     4081 tattgctgat gaccttgctg ggcggcgtct acactttctt cggccccgtc gtcggcgctc
     4141 tgctgctgcg cacgatggac gccgacatca cccagaacta tcccgagatc tggcagctct
     4201 tcctgggcgg cgtgctggtg ctgatcctgt tcggcctgcc gggcggggtc atgggcttcc
     4261 tccaggaacg cgacgtcggc agcggcgacg accaggccac gcgcacggcc aagttgctgc
     4321 gcctgttccg gcgcaagtcg tggatgttct tcctgggcgc cctgttcttc acgaccttct
     4381 tcagcatcct gcactcgccc ggcgcctggc tgctgcccag gggacgggag ttctccgtgt
     4441 tcgcattgac gagctggggc atcgtgccgt gcgcgctgct gcagctcgtc gtcggcgcgg
     4501 cggtgctggc gctgctgctg cggcgcgccg accgcttcaa ccggatcgac gggatgctgc
     4561 tgctggcgct gccggtcgcc gccctggcgc tgcacatcca tctcggcacg ccgctctcgg
     4621 ggctgctgat cgtgctcttg tggatcatct tcaccctcta ctcgctgggt cagccggaat
     4681 tcaggcgcgc ctatcacctt gggcggccgg cggcggacgg gggctgaggc gatgctgctg
     4741 cgggtcgagg ccgtaagcaa gtcgttcggc ggcttcgtcg ccatccgcga cgtcaacctg
     4801 tcggtggagc gcggacggat ggcctgcgtc atcggcccca acggcgccgg caag
//
LOCUS       DASWGA010000592         5535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1590782, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000592 DASWGA010000000
VERSION     DASWGA010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5535
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1590782"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1268)
                     /gene="sucC"
                     /locus_tag="VF991_13900"
     CDS             complement(72..1268)
                     /gene="sucC"
                     /locus_tag="VF991_13900"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006467991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEX9557587.1"
                     /translation="MNIHEYQAKALLAKFAVPLLRGGVAYTKDEAMDVARKLGGQITV
                     VKAQIHAGGRGKGRFKDDPSGKGGVRLAKSIEDVGQQAAAMLGRDLVTKQTGPAGKTV
                     RRLYIEEGCDIKRELYLSLLVDRALGRVAVVASTEGGMDIETVAHDHPEKIVEQAIDP
                     AAGFQAYQGRKIAFALGLAGKQVGNFVSLLGGLYKAFTELDCSLIEINPLVVTAAGDV
                     IALDAKMNFDDNGLFRHKDLENLRDVDEEDPAETEAAKYALNYVKLDGQIGCMVNGAG
                     LAMATMDIIKLYGASPANFLDVGGGATKERVTAAFKIILRDPNVEGILVNIFGGIMRC
                     DVIAEGVVAAAREVNLHVPLVVRLEGTNVELGKKILKESGLKITSAENLADAAEKIVT
                     AVKEHN"
     gene            complement(1433..2398)
                     /gene="mdh"
                     /locus_tag="VF991_13905"
     CDS             complement(1433..2398)
                     /gene="mdh"
                     /locus_tag="VF991_13905"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEX9557588.1"
                     /translation="MARKKIALIGAGQIGGTLALLAGQKELGDIVLFDIPEAEGIAKG
                     KALDIAQLSPVVGFDAKYTGTSDYKDIEGADVVIVTAGVPRKPGMSRDDLVGINAKVI
                     DAVGKGIKAHAPDAFVIVITNPLDAMVGLMQEVTGFPAKRVVGMAGVLDSARFRLFLA
                     EEFNVSVDDVTAFVLGGHGDTMVPLLRYSTVGGISLHDLVDMGWTTRERLDKIVQRTR
                     DGGAEIVGLLKTGSAFYAPAASAIAMAESYLKDKKRMIPCAAMLNGEYGIKGLYIGVP
                     VVIGKDGVERIVEVEFNAEEKAMFDKSVAAVKSLIDATNKIVGRV"
     gene            complement(2606..3463)
                     /locus_tag="VF991_13910"
     CDS             complement(2606..3463)
                     /locus_tag="VF991_13910"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9557589.1"
                     /translation="MDSTSIKTASGLTFTADVAGPTGGPLVLLLHGFPESRHSWRAAL
                     PALAAAGYHAVAPDQRGYSPGARPDPAELSNYAFDKLVADAIEIAAAAGHGDKRFHLV
                     GHDWGGQVSWGVAGKHPGRLASLTILSRPHPQSFRRALLKEDGDQKHRSRHHRAFLEP
                     ETGKMLLADNARRLRSGLFGQGVPEAALEEHLSVLGNPAAIEAALAWYRANKGLAADI
                     GAIKVPTLYIWGDADATVGPDAAHGTREFVEAAFAMEVLPGVGHFVMDQAPAKATELL
                     LAHLKKHPV"
     gene            complement(3474..4364)
                     /locus_tag="VF991_13915"
     CDS             complement(3474..4364)
                     /locus_tag="VF991_13915"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9557590.1"
                     /translation="MDGDRLIYGAENGLSRRSALAATGVALGSTFALAVQPVQAQTMI
                     VTPTDGLTAGAVKVKTKDGKEMDAYRAMPATGQGFGTVLVVQEIFGVHAHIADMCRRF
                     AKAGYCAVAPELYFRQGDPKTYTEIPKLISELVSKVPDEQVMGDLDSSVAFIKSEGKA
                     DTAKLGITGFCWGGRIVWMYDAHSPAVRAGVAWYGPLVRPGTELQPKNPVDLVKDLHG
                     PVLGLYGGADTGISQDSVEKMRAALKAAGNPAALKSEIVVYPDTPHAFNADYRPSYRK
                     DPAEDGWKRALAWFKANGVT"
     gene            complement(4432..>5535)
                     /gene="zapE"
                     /locus_tag="VF991_13920"
     CDS             complement(4432..>5535)
                     /gene="zapE"
                     /locus_tag="VF991_13920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HEX9557591.1"
                     /translation="RRVAGQVRADPVQEKIVLRLQAVHEQLAAMAVEPPKPGLLARLG
                     LLQAAKAPAGPHGLYIWGPVGRGKSMLMDLFFADAPVTKKRRVHFHEFMLEVQERLHR
                     RREKLATEGAPPEADTIVPIAREIATQASLLCFDEFQVTNIADAMILARLFETLFGEG
                     ITVIATSNRRPDDLYKDGLQRDRFLPFIDLVKERLEVLELGGEHDYRMDRLRNFDVYL
                     TPAGAWANAKLDEAFRALSGGADGEPRVLRTQGRDVDIPRAAPGVAMAHYLDWCAKPM
                     GAADFLCIAEHFHTVIVADVARMGPDSQDKAARFVTMIDTFYEKKVKFICSAATAPSG
                     LYVEGDGAFEFQRTVSRLMEMQSPEYLALEHIA"
BASE COUNT          910 a         1805 c         1829 g          991 t
ORIGIN      
        1 atggaaggtg ccctgcgcgc cggtgaagcc ttggcagatg accttggtgt tcttgtcgac
       61 caggacggcc atcaattgtg ctccttgacg gccgtgacga tcttttcggc ggcgtcggcg
      121 aggttctcgg cggaggtgat cttgagtccc gactccttca ggatcttctt gcccagctcg
      181 acgttggtgc cttccagccg caccaccagc ggcacgtgca ggttgacctc gcgcgcggcc
      241 gcgaccacgc cttcggcgat cacgtcgcag cgcatgatgc cgccgaagat gttgaccagg
      301 atgccctcga cgttggggtc gcgcaggatg atcttgaacg ccgccgtcac gcgctccttg
      361 gtggcgccgc cgccgacatc gaggaagttg gcgggcgagg cgccatagag cttgatgatg
      421 tccatggtgg ccatggcgag ccccgcgccg ttcaccatgc agccgatctg gccgtcgagc
      481 ttgacgtagt tcagcgcgta cttggcggcc tcggtctcgg ccgggtcctc ctcgtcgaca
      541 tcgcgcaggt tttcgaggtc cttgtggcgg aacaggccgt tgtcgtcgaa gttcatcttg
      601 gcatcgagcg cgatcacgtc gcctgctgca gtgacgacca gcggattgat ctcgatcagc
      661 gaacaatcga gctcggtgaa ggccttgtag agaccgccca gcaggctgac gaagttgccg
      721 acctgcttgc cggcgagccc cagcgcaaag gcgatcttgc ggccctggta ggcctggaag
      781 ccggcggccg ggtcgatcgc ctgctcgacg atcttctcgg ggtgatcgtg cgccaccgtc
      841 tcgatatcca tgccgccctc ggtcgaggcg accacggcga cgcggcccag ggcgcgatcg
      901 accagcaggg agaggtagag ctcgcgtttg atgtcgcagc cctcctcgat atagagacgc
      961 ctgacggtct tgccggccgg tccggtctgc ttggtgacca ggtcgcggcc cagcatggcg
     1021 gcggcctgct ggccgacgtc ctcgatcgac ttggcgagcc gcacgccgcc cttgccgctg
     1081 ggatcgtcct tgaaccggcc cttgccgcga ccgccggcat ggatctgggc tttcaccacg
     1141 gtgatctggc cgcccagctt gcgggccacg tccatcgcct cgtccttggt gtaggcgacg
     1201 ccgccccgga gcagcgggac ggcaaacttg gccagcaggg ccttggcctg atactcgtgg
     1261 atattcatgg agtcctatcg ctgggaactg cgtgcaaagc ttgcgccagt tatcagtttt
     1321 tgatcgcaac tgaccagagc cagcggcact ttatgagcgc caaacgagct tggcaacgag
     1381 cgactgatga ccgtcctgcg atgttcgacc aaagtcgcag gcagcgcgcg actcagacgc
     1441 ggccgacgat cttgttggtg gcgtcgatca gcgatttcac cgcggcgacc gacttgtcga
     1501 acatcgcttt ctcctcggca ttgaactcga cctcgacgat gcgctcgacg ccgtctttgc
     1561 cgatcacgac cggcaccccg atatagaggc ccttgatgcc gtattcgccg ttcagcatgg
     1621 cggcgcaggg aatcatccgc ttcttgtcct tgagatagga ctcggccatg gcgatggccg
     1681 acgcggccgg cgcgtagaag gccgagccgg tcttgagcag gccgacgatc tcggcgccgc
     1741 cgtcgcgcgt gcgctggacg atcttgtcga gcctttcgcg ggtggtccaa cccatgtcga
     1801 ccaggtcgtg caaggaaatg ccgccgaccg tggaatagcg cagcagcggc accatggtgt
     1861 cgccatggcc gcccagcaca aaggcggtaa cgtcgtcgac cgagacattg aactcctcgg
     1921 cgaggaacag gcgaaagcgc gcgctgtcga gcacgcccgc catgccgacg acgcgcttgg
     1981 ccgggaagcc ggtgacttcc tgcatcaggc cgaccatggc gtcgagcgga ttggtgatga
     2041 cgatgacgaa ggcatcgggt gcgtgcgcct tgatgccctt gccgaccgcg tcgatgacct
     2101 tggcgttgat gccgaccagg tcgtcgcggc tcatgccggg cttgcgcggc acgccggcgg
     2161 tgacgatgac cacgtcggcg ccctcgatgt ccttgtagtc agaggtgccg gtgtatttcg
     2221 cgtcgaaacc cacgaccggg ctgagctggg cgatgtcgag cgccttgccc ttggcgatgc
     2281 cctcggcctc gggaatgtcg aacaggacga tgtcacccag ttccttctgg ccggcgagca
     2341 acgccagggt gccgccgatc tgtccggcgc cgatcagcgc gatcttcttg cgagccatgc
     2401 gaaaaactcc cgttcgtgag gcggcgcgtg gtagcgcgat ttcggagaag cggcaaggcg
     2461 actggaaatc ttcctcctct gcgctctcat gctcctctcc cccgctaggg ggaaaggttg
     2521 ggtgaggggg ttatacccgt cgtccccctc acctggcctc tcccctagcg ggggagagga
     2581 acatgaaatg tgaataggaa ggttctcaga ccggatgctt cttcagatgc gccagcagta
     2641 gttcagtagc cttggcgggc gcctgatcca tcacgaaatg gccgacaccc ggcagcacct
     2701 ccatggcaaa ggccgcctcg acgaactcac gggtgccgtg cgcagcgtcg ggtccgacgg
     2761 tggcatcggc atcaccccag atgtagagcg tcggcacctt gatggcgccg atgtcggccg
     2821 ccaggccctt gttggcgcgg taccaggcga gtgctgcttc gattgccgcg ggatttccca
     2881 gcacggaaag atgctcctcg agcgcagctt cgggcacgcc ctggccgaac aggccgctgc
     2941 gcaggcgccg cgcattatcc gccagcagca tcttgccggt ctcaggctcg aggaaggcgc
     3001 gatgatggcg cgagcgatgc ttctgatcgc cgtcttcctt cagcaaagcg cggcgaaacg
     3061 attggggatg cggtcgcgac aggatggtga gcgaggcgag ccgcccggga tgtttgcccg
     3121 ccacgcccca cgacacctgc ccgccccaat cgtggccgac cagatgaaag cgcttgtcgc
     3181 catggcctgc ggcggcggcg atctcgatcg cgtcagccac cagcttgtcg aaggcatagt
     3241 tggagagctc cgccggatcg ggccgggcgc ccggcgaata gccgcgttgg tcgggcgcca
     3301 cggcatggta gcccgcggcg gccagcgccg gcagtgcggc gcgccagctg tgccgagatt
     3361 cgggaaaacc gtgcaacagc agcacgagcg gaccgcccgt cgggcccgcg acatcggcgg
     3421 taaatgtcag gcccgacgcg gtctttatgc tcgtgctgtc cactatcgcc cgatcaggta
     3481 acgccgttag ccttgaacca ggcgagcgcg cgcttccagc cgtcttccgc cgggtccttg
     3541 cgataggagg ggcggtagtc ggcattgaag gcgtgcggcg tgtccggata gacgacgatc
     3601 tccgacttca gtgccgcggg attgcccgca gccttgaggg cggcccgcat tttctcgacc
     3661 gagtcctggg agatgccggt atcggcgccg ccatagaggc ccagcaccgg cccatgcagg
     3721 tccttcacga ggtcgaccgg attcttgggc tgcagctccg tgccaggccg caccagcgga
     3781 ccgtaccagg caacacctgc cctcaccgcc ggactgtgcg catcgtacat ccagacgatg
     3841 cggccgcccc agcagaagcc ggtgatgccg agcttggccg tgtccgcctt gccctcgctc
     3901 ttgatgaagg cgaccgacga atcgaggtcg cccatgactt gctcgtccgg caccttggac
     3961 accagctcgc tgatcagctt ggggatctcg gtgtaggtct tgggatcgcc ctgacggaaa
     4021 tagagctccg gcgcgacggc acagtagccc gccttggcaa agcggcggca catgtcggcg
     4081 atgtgggcat gcacgccgaa gatctcctgc acgaccagga cggtgccgaa accctggccc
     4141 gtcgccggca tggcgcggta ggcgtccatc tccttgccgt ccttggtctt gaccttcacc
     4201 gcgcccgcgg tgaggccgtc cgtcggggtg acgatcatgg tttgcgcctg cacgggctgg
     4261 acagccaacg cgaaggtact gcctagcgcc acgcccgtcg ccgcaagcgc cgagcgccgc
     4321 gacaagccgt tctcggctcc gtagatcaag cgatcaccat ccatgcttgt gctccctgag
     4381 gttgactcgc ggcggagcct aggatgagcg gtgaaggccc cacaatcaca tttaggcgat
     4441 gtgctccagg gcgagatatt ccggactctg catctccatc aggcgtgaca ccgtacgctg
     4501 gaactcgaag gccccgtcgc cctcgacata gagcccgctg ggcgccgtcg ccgccgagca
     4561 gatgaacttc accttcttct cgtagaaagt gtcgatcatg gtgacgaagc gggcggcctt
     4621 gtcctggctg tcgggcccca tcctggcgac gtcggccacg atcaccgtgt gaaaatgctc
     4681 ggcaatgcac aggaaatccg cggcgcccat cggcttggcg caccagtcga gatagtgcgc
     4741 catggcgacg cccggcgcgg cgcgcgggat gtcgacgtcg cggccctggg tgcgcagcac
     4801 gcgcggttcg ccgtcggcgc cgccgctcag cgcacggaac gcctcgtcga gcttggcgtt
     4861 cgcccaggcg ccggccggcg tcaggtagac gtcgaagttg cgcagccggt ccatgcgata
     4921 gtcgtgttcg ccgcccagct cgaggacttc caggcgctcc ttgacgaggt cgatgaaagg
     4981 cagaaagcgg tcgcgctgca ggccgtcctt gtagaggtcg tcgggcctgc ggttggaggt
     5041 ggcgatgacg gtgatgccct ccccgaacaa ggtctcgaac aggcgcgcca ggatcatcgc
     5101 gtcggcaatg ttggtcacct ggaattcgtc gaagcagagc agacttgcct gggtcgcgat
     5161 ctcgcgcgcg atcggcacga tggtgtcggc ctccggcggc gcgccctcgg tggcgagctt
     5221 ctcgcggcgg cgatgcagac gctcctggac ctcgagcatg aactcatgga agtgcacgcg
     5281 ccgcttcttc gtcaccggcg catcggcgaa gaacagatcc atcagcatcg acttgccgcg
     5341 gccgaccggt ccccagatgt agaggccgtg cggtccggca ggcgctttcg ccgcctgcaa
     5401 caagccgagc cgcgccagca ggccgggctt gggcggctcg acggccatgg ccgccagctg
     5461 ctcgtgcaca gcctgcaagc gcagcacgat cttttcctgc accgggtcgg ctcgtacctg
     5521 gcctgcaacg cgtcg
//
LOCUS       DASWGA010000593         2144 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2208014, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000593 DASWGA010000000
VERSION     DASWGA010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2208014"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VF991_13925"
     CDS             complement(<1..515)
                     /locus_tag="VF991_13925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557592.1"
                     /translation="MKHDTIERATTMRLEQAIAGGHGAATAASGTHRPRRGRVVSEAI
                     ISPFVAGLDAVTIFAAGVVAMRWDPSGVDWRLEGLVILLGALLGMNFLHLAGAHRFAQ
                     FADLGGAIGRALLGWLITLSTLVVANSLVEPVTAANGPWIALWFSGGVVLLVSGRVVL
                     HHQMKSWSRAGR"
     gene            complement(623..1873)
                     /locus_tag="VF991_13930"
     CDS             complement(623..1873)
                     /locus_tag="VF991_13930"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9557593.1"
                     /translation="MPSRWPDNAPSPREVLILEPDAEGHSQEWLQHLAEFVAKDARGV
                     AIAVAAPPALCTALSRSMPPAAEGRIRFIALGPRELELCTHRSLLVAAFARWWTMRRY
                     LSRSGADFGFFLSLDLLCLPFALGLGMLGKPIAGILFRPSVHYGALGEYHPNSAERLR
                     DLRKDLLYRLMLRNPSIQAVLSLDPFFPAHALSHYRHGVKVQAVPDPAQPTVEATGGS
                     TAGTDFVPPGRIGLLLFGYLTERKGPLAVLDALRLLPSHIAARVALLFAGRIDPAIRH
                     AIDSRCSALARDRPELWLRIEDRRLDRADLAALVARSDIVLAPYQRFVGSSGVLLWAA
                     RAGRPVLAQEFGLVGRLTRDHHLGAVADSSDPARLASEIERMIVRGPQSFIDLSSATT
                     FASSRTPQRFASAVLSSLIERTAA"
     gene            complement(1851..>2144)
                     /locus_tag="VF991_13935"
     CDS             complement(1851..>2144)
                     /locus_tag="VF991_13935"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9557594.1"
                     /translation="FAVPSKVFNIMAVGRPFVATALPDSVLWRLQRQSGAFLCVPPDD
                     PLTFAEAVTKLADDSRLRQELGQRGREFVERHYAKPRVLGHLMSRLDAFAMAR"
BASE COUNT          382 a          691 c          768 g          303 t
ORIGIN      
        1 cggccggcgc ggctccagct tttcatctgg tgatgcagca cgacgcggcc gctcacaagc
       61 agcacgacgc cgcccgagaa ccacagggca atccacgggc cattcgcggc ggtcaccggc
      121 tcgaccaggg agttggcgac aaccagcgtg ctcaaggtta tcagccagcc cagcaaggcg
      181 cggccgatgg cgccgcccag gtcggcgaac tgggcgaagc gatgcgcgcc ggcaagatgc
      241 aggaagttca tgccgagcaa tgcgccgaga aggatgacga ggccttcgag gcgccaatcg
      301 acgccggagg gatcccaacg catggcgaca acgccggcgg cgaagatggt gaccgcgtcg
      361 aggcccgcca cgaacgggct gatgatcgcc tccgagacga cgcggccccg ccgcggtcga
      421 tgcgtgcccg atgccgccgt cgcggcgcca tggccaccag cgattgcctg ctcgagccgc
      481 atcgtcgtcg cccgctcgat cgtgtcgtgt ttcatacggt ctctcctcac ggatgacctg
      541 acgacatgtc ggtcgtcgat tacatgggcc gattctccac gccgtttgcc ggcgatgttg
      601 tgatcatgtt ggggtcgcaa agtcaggcgg cggtgcgttc gatcaggctg gaaagcacgg
      661 ccgatgcgaa ccgctgcggc gtgcgcgacg aggcgaaagt tgtggccgat gacaggtcga
      721 tgaaactttg tggcccgcga acgatcatgc gctcgatctc gctggcgagg cgggccggat
      781 cggatgaatc ggcgaccgcg cccaagtgat ggtcgcgcgt cagccgtccg accaggccga
      841 attcctgggc gagcaccgga cgtccggccc gcgccgccca cagcagaacg ccactggagc
      901 cgacgaagcg ctgatagggc gccagcacga tgtcgctgcg cgccaccagg gccgcgaggt
      961 cggcgcggtc gagccgcctg tcctcgatgc gcaaccacaa ttcgggccgg tcgcgcgcca
     1021 gcgccgagca gcggctgtcg atggcgtgac ggatggcggg atcgatccgg ccggcaaaca
     1081 gcaaggcgac gcgggcggcg atatggctcg gcaacagtcg gagcgcgtcg agcacggcga
     1141 gcggtccctt gcgctcggtc aggtagccga acagcagaag accgatgcgc ccgggtggca
     1201 cgaaatcggt gcctgcggtg ctgccgccgg tggcctcgac cgtcggctgg gccgggtcgg
     1261 gcaccgcctg caccttgacg ccatggcggt aatgcgagag ggcgtgtgcc gggaagaagg
     1321 gatcgagcga cagcaccgcc tgtatgctgg gattgcgcag catcaggcgg tagagcaggt
     1381 ccttgcgcag gtcgcgcagt ctttcggccg agttcggatg gtattcgccg agcgcgccat
     1441 agtgcaccga cgggcggaac aagatgccgg cgatcggttt gcccagcatg cccagtccga
     1501 gcgcgaacgg caggcaaagc aggtccaggg agagaaagaa tccgaagtcg gcgccgctgc
     1561 ggctgagata tcggcgcatc gtccaccagc gcgcgaacgc cgctaccagc agcgatcggt
     1621 gggtgcacag ctcgagctcg cgcggcccca aggcaatgaa gcggatgcgg ccctcggcgg
     1681 cgggcggcat cgaccgcgac agcgccgtgc acagcgccgg cggcgccgct acggcaatcg
     1741 ccacgcccct cgcgtctttg gcgacgaatt cggccaggtg ctgcagccat tcctgggaat
     1801 gaccttcggc gtcgggctcg aggatcagca cttcgcgcgg cgacggcgcg ttatcgggcc
     1861 atcgcgaagg catcgaggcg gctcatgaga tggccgagaa cgcgcggctt ggcgtagtgc
     1921 cgttcgacga attcgcggcc gcgctgccca agctcctggc gcaggcggct atcgtcggcg
     1981 agcttggtga ccgcttcggc gaaggtcaaa ggatcgtccg gcggcacgca caggaaagcc
     2041 ccgctctgtc gttgcagacg ccacagcacg ctgtcgggca gggcggtggc gacgaacggc
     2101 cgtccgaccg ccatgatgtt gaagaccttc gacggcacgg cgaa
//
LOCUS       DASWGA010000594         3420 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_67517, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000594 DASWGA010000000
VERSION     DASWGA010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67517"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            307..504
                     /locus_tag="VF991_13940"
                     /pseudo
     CDS             307..504
                     /locus_tag="VF991_13940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006337788.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            complement(514..1728)
                     /gene="mhpT"
                     /locus_tag="VF991_13945"
     CDS             complement(514..1728)
                     /gene="mhpT"
                     /locus_tag="VF991_13945"
                     /inference="COORDINATES: protein motif:HMM:NF008586.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-(3-hydroxy-phenyl)propionate transporter MhpT"
                     /protein_id="HEX9557595.1"
                     /translation="MTGARATDSGWRKRLTLALCFLAILCEGIDIVSMGLAAPRMAPA
                     LGLTRDQLGPLFSASIVGLLVGAVIFGRLADRFGRKWTLVTCLVIFGFFSLATAAVRP
                     FEALLAVRLAAGLGLGGALPNLVALAAEAVAPQSRAGLVTRITCGIPFGGAICGIVAV
                     NLDWQAIFYVGGLAPLALAPIAAFALLESRAFLEARQSALPTAAARDDFRWILFGGGR
                     ASATLLLWTASFASLLALYVLLNWLPTLLGDRGLSKPHASLVSMLFGIGGAVGVLILA
                     DLLDRRGRRRMIGLWYLGLFASLVALAVVNSGFLATALAGFAVGFFVSTAPLPLYGMA
                     PCYYGVSMRGAGVGVSVAVGRLGAIFGPLLAAALLGAGAGASGVLLALLPITAVAGGA
                     TMALIDRPRLAD"
     gene            complement(1924..3147)
                     /locus_tag="VF991_13950"
     CDS             complement(1924..3147)
                     /locus_tag="VF991_13950"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX9557596.1"
                     /translation="MTTTFNAAATKTVGVNATNFEFTFTRLERIAFGPGKITTLGAEL
                     ERMGATRALVATGKTLGASPLLERVTAAMGPHCAGVFAGVGQHVPASSVRALVAEAER
                     VGADALVAFGGGSPIDACKVAAASLLNRRDMTLVAGKIDFDGASRAGGAGREIRLVAV
                     PTTLSAGEFTPGGGVTDEATRVKRIVADARLQHRIVIYDPELCLNTPDWLWVATGMRA
                     LDHAIEGIYSTRAQPFTDTLGAEAIRLMMAHLPGSVGGGSDRLAERGWCQIAAWHSFF
                     GGFSTRMGVSHALGHKIGPHWDVPHGVTSCITLPHVMRFMADVAPQRFRRIAEALDVP
                     FDDPRAAALASADKVAAFIAGFDVPHSLKAAGVERAEIHDIAEAVADEVAHAKIVERP
                     VTVNEIKGLLDAAYE"
BASE COUNT          591 a         1172 c         1192 g          465 t
ORIGIN      
        1 atgtcggcgt ccagatgcca cgccgaaaag tgcgcaatat ctgcccgggt cctgttcgga
       61 aatgcctcga ttgcgccttc tttgcctcgg tccgtccttc cgcgaaagaa cgtctgctgg
      121 cgacagatgg tgaaggagtg cgcgaaggag aagccgttgt tcgtcaatcg tccgagccgg
      181 cgcgccctgc cggctcgcca gggcgcatcc tacgcccgca agccgcgctc gcggtcccag
      241 agccagcgcg cgagacggtc gagcgcggtc gcaaggtggc ggcggtatgt gccgaaggcg
      301 aggccgaaca gcgagcggat gctcattcgt gtcgaacgcg gcaagggtgg caggtatcgc
      361 aacgccatgc tgtcgcccga tctgctgacc ctgctcagaa catggtggct cgagggtcgc
      421 cgccagggcg cgatgttccc gggcggctgg ttgtttccgg gccagaatcc ggtcaagccg
      481 atcagcacgc gccaactcgc ccgcgcggat gggtcagtcg gccagccgcg gacgatcgat
      541 cagggccatg gtggcgccgc cggccaccgc ggtgatgggc agcagggcca ggaggacgcc
      601 cgacgcgccc gcgccggcgc ccagcagcgc cgccgcaagc agcggaccga agatcgcgcc
      661 gagccggccg acggccacgg agactcccac gccggcgccc cgcatcgaca ccccgtagta
      721 gcagggcgcc atcccgtaga gcggcagggg cgcggtgctg acgaagaagc cgacggcgaa
      781 gcccgcgagg gcggtggcca ggaagcctga attcacgacg gccagagcga cgagcgatgc
      841 gaagaggcca aggtaccaca ggccgatcat ccgccgccgc ccgcgccggt cgagcagatc
      901 ggccaggatc agaaccccga cggccccgcc gatgccgaac agcatcgaga cgagactggc
      961 gtgaggcttg gaaaggcctc tgtcgccgag cagcgtgggc agccagttga gcagcacata
     1021 gagcgccagc aaggaggcga acgacgcggt ccatagcagc agggtggcgc tcgcccgccc
     1081 gccgccgaac aggatccagc ggaaatcatc gcgcgccgcc gccgtcggca gcgccgactg
     1141 gcgcgcctcg agaaaggccc gtgactcgag gagggcgaag gcggcgatcg gggccagcgc
     1201 caggggcgcc agcccgccga catagaagat ggcctgccag tccagattga ccgccacgat
     1261 cccgcatatg gcgccgccga acggaatacc gcaggtgatg cgggtcacca ggccggcgcg
     1321 gctctgcggc gccacggctt cggcggccag ggccaccagg tttgggaggg cgccgcccag
     1381 ccccaggccc gccgcgaggc gcactgccag cagggcctcg aagggcctga ccgcggccgt
     1441 cgccagggaa aagaacccga agatcaccag acaggtcacc agggtccatt tccggccgaa
     1501 ccggtcggcg aggcggccga agatcaccgc gccgacaagc agcccgacga tgctggcgct
     1561 gaacagcggt cccagctggt cgcgcgtcag cccgagcgcg ggcgccatcc tcggcgcggc
     1621 caagcccatc gacacgatgt cgatgccctc gcagagaatg gccaggaagc agagcgccag
     1681 ggtcaagcgc ttgcgccagc cgctatccgt ggcccgggcc ccggtcatgg attgtccccc
     1741 acccgcgggc attctgtcga ggtcgagggt cgaaagaccg gtgtggttga atcctcgacg
     1801 aggcatggct tcagtccggc gtgtactgca cggcgtcgag caatggcacg atttcgacct
     1861 cgaacgcgtc gccgacaatc tcgtgcagcg gccggccggc gcggcccgtc gagcgccggt
     1921 gcctcactca taggcggcgt ccagcaatcc cttgatctcg ttgaccgtga ccggccgctc
     1981 gacgatcttc gcgtgcgcca cctcgtctgc gaccgcctcg gcgatgtcgt ggatctcggc
     2041 gcgttcgacg ccggcggcct tgagcgaatg cggcacgtcg aagccggcaa tgaaggcagc
     2101 caccttgtcg gctgaggcga gcgccgccgc cctgggatcg tcgaacggca cgtccagcgc
     2161 ctcggcgatg cgccggaagc gctgcggcgc cacgtcggcc atgaagcgca tgacgtgcgg
     2221 caaggtgatg caggaggtga cgccgtgcgg cacgtcccag tgcggtccga tcttgtggcc
     2281 aagcgcgtgc gacacgccca tccgcgtact gaacccaccg aagaaggagt gccaggcggc
     2341 gatctggcac cagccgcgct cggcgagacg gtcggatccc ccgccgaccg aaccgggcag
     2401 atgcgccatc atcagccgga tcgcctcggc gccgagcgtg tcggtgaagg gctgggcgcg
     2461 tgtcgaatag atgccctcga tcgcgtggtc gagggcccgc atcccagtcg caacccaaag
     2521 ccagtccggc gtgttgaggc agagctccgg atcgtagatg acgatgcgat gctggaggcg
     2581 cgcatcggcc acgatgcgct tgacgcgggt tgcctcgtcg gtgaccccgc cgccgggcgt
     2641 gaactcgccg gcagagagcg tggtgggcac cgcgacgagc cggatctccc ggcccgcgcc
     2701 gccggcccgg ctcgcgccgt cgaaatcaat cttgcctgcc accagggtca tgtcgcgacg
     2761 gttgagcagc gaggccgcgg ccaccttgca ggcgtcgatc gggctgccgc cgccgaacgc
     2821 gaccagcgca tcggcgccga cccgctcggc ctcggccaca agggcccgca ccgaacttgc
     2881 gggcacatgc tgcccgacgc ccgcgaacac gccggcgcag tgcgggccca tcgccgccgt
     2941 gacgcgctcg aggagcggcg aggcgcccaa ggtcttgccg gtcgcgacca gcgcgcgcgt
     3001 cgcgcccatc cgctcgagct cggctccgag cgtcgtgatc ttgccggggc cgaacgcgat
     3061 tcgttcgagc cgtgtgaagg tgaactcgaa gttcgtcgca ttgacaccga cggttttggt
     3121 agcagccgca ttgaaggttg tggtcatgat tccctctcag tccatcccga gtgccaggtg
     3181 cgatcattgc cgccggtaat gacgactacg ttctatcgcc cgaaatgatc gatgatgggt
     3241 tctagatcgg gcccgcattt gaaggtcgca ccacgagcca ggcgatcaca tcctctgcaa
     3301 tgcgccgagc cccctcgccc agcagcacat tgtgcccgtg cgctggctca agctggtacg
     3361 tggcgccgta tagggcggcg agcgctgcgc cagtttcggg tggcgtcaaa atgtcgagcg
//
LOCUS       DASWGA010000595         1704 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_67583, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000595 DASWGA010000000
VERSION     DASWGA010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67583"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1692)
                     /locus_tag="VF991_13955"
     CDS             complement(<1..1692)
                     /locus_tag="VF991_13955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9557597.1"
                     /translation="MPSAVRAIADKVAALAFAERDEIERLYPKVLRRVGGYNLDIFFP
                     QSERPYTLDNSVNLSHLLVGSEGTLAVTQRLTLRLAPLPRHKALGVVNFASFYKAMQS
                     AQHIVRLKPTAVELVDRTMIELARANPAFRPVIERALIGKPEAILLVEFAGEEREAQL
                     RDLARLVELMGDLGLPGSVVEMPEPKPQAELWEVRKAGLNIMMSMKGDGKPVSFIEDC
                     AVPLEHLADYTQRLTDVFTKHGTRGTWYAHASVGTLHVRPILDMRRDGAAKMRAIAEE
                     ASAIVREYKGAYSGEHGDGLVRSEWVAWQFGPRLTKAFETIKDLFDPAGILNPGKIVR
                     PSRMDDRSLFRFKPGYTNVAYTPALDWSAWNVQNDPTTEALSEPGSGGDPTGGLAKAA
                     EMCNNNGHCRKFDAGTMCPSFRVTRDEIHLTRGRANTLRLALSGQLGAKALTSDAVAA
                     AMDLCVSCKGCKRDCPTGVDMARMKIEVKSARRMSKGLSLRDRLIGNLPDIAPWARRL
                     PWLFNLAGLVQPWLGFARQRRLPKWRGDTFLTTTDVDQGDATVVIFADTFSNNFEP"
BASE COUNT          257 a          572 c          588 g          287 t
ORIGIN      
        1 cggctcgaaa ttgttggaga aggtgtcggc gaagatcacc accgtggcgt cgccctgatc
       61 gacgtcggtc gtggtgagga aggtatcgcc gcgccatttc ggcaggcggc gctgcctggc
      121 aaagcccagc cacggttgca ccaggccggc gaggttgaac agccagggca gccgccgcgc
      181 ccacggcgcg atatccggca ggttgccgat caggcggtcg cgcaggctga ggcctttgct
      241 catgcggcgg gcggacttca cttcgatctt catgcgtgcc atgtcgacgc cggtcgggca
      301 gtcgcgcttg cagcccttgc agctcacgca gagatccatc gccgccgcca cggcatccga
      361 cgtgagcgcc ttggcgccga gctggcccga cagggcgagc cggagcgtat tggcgcggcc
      421 gcgcgtcaga tggatctcgt cgcgcgtcac gcggaaggac gggcacatcg tgccggcgtc
      481 gaacttccga cagtggccat tgttgttgca catctcggcg gccttggcca aaccgccggt
      541 cggatcgccg ccgctgcccg gctcgctcag cgcctcggtg gtgggatcgt tctggacgtt
      601 ccacgccgac cagtcgaggg ccggcgtata ggcgacgttc gtgtagcccg gcttgaagcg
      661 gaacagcgag cggtcgtcca tgcgcgaggg ccgcacgatc ttgccgggat tgagaatgcc
      721 ggcaggatcg aacaggtcct tgatcgtctc gaacgccttg gtgagtctcg gcccaaactg
      781 ccaggccacc cattccgagc gcaccagccc gtcgccgtgc tcgcccgagt aggcgccctt
      841 gtactcgcgc acgatcgccg aggcctcctc ggcgatcgcc cgcatcttgg ccgcgccgtc
      901 gcggcgcatg tcgaggattg gccgcacgtg cagggtgccg accgaggcgt gggcgtacca
      961 ggtgccgcgc gtgccgtgct tggtgaacac gtcggtcagg cgctgggtgt aatccgccag
     1021 atgctcgagc ggcaccgcgc agtcctcgat gaacgacacc ggtttgccgt cgcccttcat
     1081 cgacatcatg atgttgagcc cggccttgcg cacttcccac agctcggcct gcggcttggg
     1141 ctcgggcatc tcgaccacgc tgccgggcag gccgagatcg cccatcagct caaccagccg
     1201 cgccaggtcg cgcaattgcg cctcgcgctc ctcgcccgcg aactcgacca gcaggatcgc
     1261 ttcgggcttg ccgatcaagg cgcgctcgat caccggccgg aacgccggat tggcgcgcgc
     1321 cagctcgatc atggtgcgat cgaccagctc gacggcggtc ggcttcagcc ggacgatgtg
     1381 ctgggcgctc tgcatcgcct tgtagaagct cgcgaagttc acgacgccca gggccttgtg
     1441 cctgggcagc ggcgcgagcc tgagcgtcag ccgctgcgtg acggccaagg tgccttcgct
     1501 gccgaccagc aggtgcgaga ggttcaccga attgtcgagc gtgtagggtc gctccgactg
     1561 cgggaagaag atgtcgaggt tgtagccgcc gacccggcgc agcaccttgg gatagaggcg
     1621 ttcgatctcg tcgcgttcgg cgaaggccag ggccgccacc ttgtcggcga tggcgcgcac
     1681 ggccgacggc atgtcctccg ggcg
//
LOCUS       DASWGA010000596         3613 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1712772, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000596 DASWGA010000000
VERSION     DASWGA010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3613
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712772"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..942)
                     /locus_tag="VF991_13960"
     CDS             complement(<1..942)
                     /locus_tag="VF991_13960"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557598.1"
                     /translation="MPAGWPRRLAVATITIGLMMSVLSNSMTNLALPYIAQDLKITAE
                     SSIWIVNATQIALIVSLLPVAALADIVGYRHVYRFGLVLFSLASIGCAFAPSLPWLLL
                     GRTFQGLGGAAIMSVQPALVRAIYPRAQLGRGLGFNTTVVATSLAAGPSIGAALLTIT
                     SWPILFAVYAPLGLISFILAERYLPHTTHTHRPFDVLSAAMSGATFGLLIFGIDGMAH
                     GHQRMVVVSELVLAAVLGTLFVWRQTRLADPMMPIDVFKRPLFSLSITAASCTFAAQG
                     LAFVSLPFFFHTVLGRNATDTGILLTAWPLALAAVAPI"
     gene            complement(988..1863)
                     /locus_tag="VF991_13965"
     CDS             complement(988..1863)
                     /locus_tag="VF991_13965"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9557599.1"
                     /translation="MRNTGPITVTKLHPLFGAEVSGIDITRPLSAREFGPVRAAFEEH
                     SVLLFRDQPMDDEKQIAFSELFGPLETTGSANPAAGTKFQRQSNLDIMTGEPIPPDDM
                     RMIYQKANYFWHSDSSFKRIPSLCSILTARICPPEGGNTEFLSMRAAWDALPPALQAT
                     IQPLIAEHALLYSRNRVQKGILSAKAIAELPPVKQRLYRDNPINGRRALYIGAHTGFI
                     VGWPKATGEALLYELTQRADQPEFRLSHAWREGDVIVWDNRAVLHRATYYDTVKYKRF
                     MQRTTIGGDLPTVPQ"
     gene            complement(1883..3124)
                     /locus_tag="VF991_13970"
     CDS             complement(1883..3124)
                     /locus_tag="VF991_13970"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9557600.1"
                     /translation="MDTLPLVAPEQVGLSAARLDRVRKWMHGWVDSGRLAGMVAVVMR
                     KGELAFAETTGRADIERNKPMRPDTIFRIYSMTKPLTSTAIMMLYEEGRFQLDDPISK
                     FIPAFANPRVYAGGSRGKIDSVPAEREINFRDLLTHTSGLTYGFMESNPVDALYRAKD
                     GVDFGTADTSLKQVVEKLATFPLIAQPGKAWNYSVATDVLGYLVEVISGQPFQVYLKD
                     KVLNPLGMVDTDFHVPADKHERFAANYQAGPSNANGAGKLELIDDPGKSRYLNPRKVN
                     SGGGGLVSTASDYLRFCKFMLNKGELDGVRLLGRKTVELMTMNHLKGDMADMGMPRFS
                     ESTYYGIGFGLGFSVMIDPAKAHILGTPGEYAWGGAASTAFWCDPQEDMAVVMLTQLM
                     PSSTYPIRRELRVLTYQAIVD"
     gene            3199..>3613
                     /locus_tag="VF991_13975"
     CDS             3199..>3613
                     /locus_tag="VF991_13975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008197060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9557601.1"
                     /translation="MARLCEGRVAIVTGGARGVGREHCLMLAEHGAKVVVNDLGGDRA
                     GKGNDVGPAQQVVNEIKAMGGEAVANGDDVSDWDGAKHMVDQAISAFGKLDALVLNAG
                     ILRDRMLVNMSEEEWDSVIRVHLKGTFAVSRHAAAY"
BASE COUNT          632 a         1082 c         1314 g          585 t
ORIGIN      
        1 gatgggcgca acggcggcca gcgccagcgg ccaggccgtc agcaggatgc cggtgtcggt
       61 ggcgttgcgg cccaggacgg tgtggaagaa gaagggcagg ctgacgaagg ccaagccctg
      121 ggcggcgaag gtgcagcttg ccgcggtgat ggagagcgag aagagcggcc gcttgaagac
      181 gtcgatcggc atcatcggat cggcgagcct cgtctggcgc cacacgaaga gggtgcccaa
      241 caccgcggcg aggacgagct cggagacgac caccatcctt tgatggccgt gcgccatgcc
      301 gtcgatgccg aagatcagca gcccgaacgt tgcgcccgac atcgccgccg acagcacgtc
      361 gaacggccgg tgggtgtgcg tggtgtgcgg caggtagcgt tccgccagga taaaggagat
      421 gaggccaagc ggcgcataga cggcgaacag gatcggccac gacgtgatgg tgagcagcgc
      481 cgcgccgatc gacggtccgg cggcgagcga ggtggcgacc acggtggtgt tgaagcccag
      541 gccacggccg agttgcgcgc gcgggtagat ggcgcgcacc agggccggct gcaccgacat
      601 gatggcggca ccgcccaggc cctggaaggt tcgtcccagc aacagccagg gcagcgatgg
      661 tgcgaacgcg cagccgatcg acgccagcga aaacaggacc aatccgaagc gatagacatg
      721 gcgataaccc acgatgtcgg ccagcgccgc cacgggcagc agcgacacga tgagggcgat
      781 ctgcgtggcg tttacgatcc agatcgagct ctcagccgtg atcttcaggt cctgggcgat
      841 atagggcagc gccaagttgg tcatggagtt gctgagcacc gacatcatca gcccgatggt
      901 gatcgtcgcc accgcaagcc ggcgtggcca gcctgcgggc attccgtcgg tagcagcgat
      961 tgccgtcgcg ggcgcttcgg ccatctctta ctgtggcacc gtcgggagat cgccgccgat
     1021 ggtggtgcgc tgcatgaagc gcttgtactt caccgtgtcg tagtaggtgg cgcggtgcag
     1081 gacggcgcgg ttgtcccaca cgatcacgtc gccctcgcgc caggcgtgcg acagccggaa
     1141 ctccggctgg tcggcgcgct gcgtcagctc gtagagcagc gcctcgccgg tcgccttggg
     1201 ccagccgacg atgaagccgg tatgggcgcc gatatagagc gcgcgccgtc cgttgatcgg
     1261 attgtcgcga taaagccgct gtttgaccgg cggcagctcg gcgatcgcct tggcgctcag
     1321 gatgcccttc tgcaccctgt tgcgcgaata gagcagggca tgctcggcga tcagcggctg
     1381 gatggtggcc tgcagcgccg gcggcagggc gtcccacgcg gcgcgcatgg ataaaaactc
     1441 ggtgttgccg ccctcaggcg ggcagatgcg cgcggtcagg atcgagcaca gcgaggggat
     1501 gcgcttgaac gaggagtccg agtgccagaa gtagtttgcc ttctggtaga tcatgcgcat
     1561 gtcgtcgggc gggatcggct cgccggtcat gatgtcgagg ttggactggc gctggaattt
     1621 ggtgccggcg gcgggattgg cgctgccggt ggtctcgagt gggccgaaca gctcgctgaa
     1681 ggcgatctgt ttttcgtcgt ccatcggctg gtcgcggaac aggagcacgg agtgctcctc
     1741 gaaggcggcg cggaccggcc cgaactcgcg cgccgacagc ggccgcgtga tgtcgatgcc
     1801 cgatacctcc gcgccgaaca gcggatggag cttggtgacg gtgatggggc cggtattgcg
     1861 cactcgcgtc gctccgcgtc gcctagtcga caatcgcctg gtaggtgagc acgcgcagct
     1921 cgcggcggat cggataggtc gaggacggca tgagctgggt cagcatcacc acggccatgt
     1981 cctcctgcgg atcgcaccag aaggcggtcg aggcggcgcc gccccaagca tactcgccgg
     2041 gcgtgcccag gatgtgcgcc ttggccggat cgatcatcac cgagaagccc agcccgaagc
     2101 cgatgccgta gtaggtcgac tccgagaagc gcggcatgcc catgtcggcc atgtcgccct
     2161 tgagatggtt catggtcatg agctcgaccg tcttgcggcc gagcaggcgg acgccatcga
     2221 gctcgccctt gttcagcatg aacttgcaga agcgcagata gtccgatgcc gtcgagacca
     2281 acccgccgcc gccggaattc accttgcgcg gattgagata gcggctcttg ccgggatcgt
     2341 cgatcagttc gagcttgccg gccccattgg cgtttgaggg ccccgcctgg tagttggcgg
     2401 cgaagcgctc atgcttgtcg gctggcacgt ggaagtcggt gtcgaccatg ccgaggggat
     2461 ttagcacctt gtccttgaga tagacctgga agggctggcc tgagatgact tcgaccaggt
     2521 aacccagcac atcggtggcg acgctgtaat tccatgcttt gccgggctgg gcgatcagcg
     2581 ggaaggtcgc gagcttctcg acgacctgct tgaggctggt gtcggcggtg ccgaaatcga
     2641 cgccgtcctt ggcgcggtag agcgcgtcga ccgggttgct ctccatgaag ccgtaggtca
     2701 ggcccgacgt gtgggtcagc aggtcgcgga aattgatctc gcgctcggcc ggcacggaat
     2761 cgatcttgcc gcggctgccg ccggcataga cccgcgggtt tgcgaaagcg gggatgaact
     2821 tggagatcgg gtcgtcgagc tgaaagcggc cctcctcgta gagcatcatg atcgcggtcg
     2881 aggtgagggg cttggtcatg gaatagatgc ggaagatcgt gtcgggccgc atcggcttgt
     2941 tgcgctcgat gtcggcccgg ccggtggtct cggcgaaggc gagctcgccc ttgcgcatga
     3001 cgacggcgac catgccggcc aggcggccgc tgtcgaccca gccatgcatc catttgcgca
     3061 cgcggtcgag ccgcgctgcg gaaaggccga cctgttcggg ggcgacgagc ggcagggtgt
     3121 ccatggcgat cctcctcggt aggccgctag actagcgcag gaaagcacgg ccagacacga
     3181 cagaaacggg agggagcaat ggcgagattg tgcgaaggca gggtggcgat cgtgaccggc
     3241 ggcgcgcgcg gcgtgggccg cgaacactgc ctgatgctgg ccgagcatgg cgccaaggtg
     3301 gtggtgaacg acctgggcgg cgaccgcgcc ggcaagggca acgacgtggg accggcccag
     3361 caggtcgtga acgagatcaa ggccatgggc ggcgaggcgg tggccaacgg cgacgacgtc
     3421 tccgactggg atggcgccaa gcacatggtc gaccaggcga tctcggcctt cggcaagctc
     3481 gacgccctgg tgctgaatgc cggcatcctg cgcgaccgca tgctggtcaa catgagcgag
     3541 gaggagtggg actcggtcat ccgcgtccat ctgaagggca ccttcgccgt ctcccgccac
     3601 gccgccgcct act
//
LOCUS       DASWGA010000597         5778 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1591952, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000597 DASWGA010000000
VERSION     DASWGA010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5778
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1591952"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VF991_13980"
     CDS             complement(<1..270)
                     /locus_tag="VF991_13980"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HEX9557602.1"
                     /translation="MTARSLTIDIDGGGTVSGLWLRPATAKACLLLAHGAGAGMTHRA
                     MTALADGLAERAIATLRFQFPYMERGSRRPDPPAVAHAAVRAACAK"
     gene            complement(274..1620)
                     /locus_tag="VF991_13985"
     CDS             complement(274..1620)
                     /locus_tag="VF991_13985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557603.1"
                     /translation="MASTVNAGARLDRLPISSFHYRIFWLIGAGMFFDGYDLYVGASV
                     LGAAVQTKFAVLAQVPQFISWTFVGMTIGAVVAGFLGDRYGRRFTYQFNLIVFGLASF
                     AAAAAPTMDWLIAARFVMGLGLGAEIVVGYSTMTEFVPPASRGRWMAFMAFLVVAGFP
                     ATSIISTLVIPSFGWRPMFVIAGVGALIVWYLRKNLPESPRWLEANGRTAEAEALMQA
                     IEREASGGKPLPPPAPALPEPQYTFASLFSPALLPRLIVGSVVLITVNTLIFGFVNWL
                     PTFFGQQGIGITRSLTYTMVLAGGSLVGCALGAWAADQFGRKPTIIAASLLSIAAGAI
                     YPYMVEPALLLGVGFVLIVGIYVLTAVLYGVYTTELFPTEVRLRANGLCNMLGRGATV
                     VSPFIVLALFKSYGLHGVLGLMIGLLILQIVVVAIWGIETNRRRLEELQAASPRTA"
     gene            1749..2525
                     /locus_tag="VF991_13990"
     CDS             1749..2525
                     /locus_tag="VF991_13990"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9557604.1"
                     /translation="MTSDKSTLDVVQTGKGRDLVLLHSLLSDRTAFDRITPRLANERR
                     VWLVNLPGFGASAPAGPGLDDVADRLAGELPKLGLSRDADLLGNGFGGFVAVALAVRH
                     GGLFDRLVLVDTGAAIPPQGKDAFEAMAQRVETGGMEAVLSVALQRMFPDDFLAANPT
                     IAEERKAALRAARPENFAAACRALAQFDARSALASIRNPTLVVVGLRDTATPPALSYE
                     LANGIAGAKLIELPHCGHSPHIQDPEGFWQAIEPFLKLAG"
     gene            complement(2535..3596)
                     /locus_tag="VF991_13995"
     CDS             complement(2535..3596)
                     /locus_tag="VF991_13995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9557605.1"
                     /translation="MTRFRVAVAFVLAIVTTTASAADYPPPKQGDWIARDFKFHSGEV
                     VPELRLHYTTIGEPSGQPVLVLHGTTGSAASMLTPSFAGELFGAGQPLDAAKYYIIIP
                     DGIGHGKSSKPSDGLRAKFPKYDYADMVDAQYRLLKEGLGVSHLRLVIGNSMGGMHTW
                     LWGERYPDFMDALAPMAAQPTAMSSRNWMMRRLIIDSIRNDPDWKDGNYTTQPRAFKT
                     AAVFFAIATSGGTLAYQKMAPTREKADKLLDERLAAPFTADANDYLYQWEASSDYDAS
                     PGLARITAALLAINSADDERNPPETGLMVAALKQVKNGRLHLIPASEETRGHGTTGMA
                     KFYAQPLADLLQRAPPAVR"
     gene            complement(3637..4854)
                     /locus_tag="VF991_14000"
     CDS             complement(3637..4854)
                     /locus_tag="VF991_14000"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX9557606.1"
                     /translation="MSPPHGPLQGVKVVSCSTAQAGTVPWMLMADLGADVIKIEVPEG
                     GDGSRHMTVLPGMPSTFFETNNRGVKSVTLNLKAAEGRAILHKLVARADIFGQNFRPG
                     AAEKNGFGWEELRKVNPKLVYVSISGYGPKGPHAHLPGTDSMAQALGGIAEAYSMPGQ
                     KMRTGVASVADESTAMLAFGGALAALTYARTTGIGQKIELSLLGSLVRLMGWTFTTTM
                     WRNQNPVTGQARITGTAQRPGISASFNDRDGKPLVFQLTGPENWKDAMTALGFHPRIK
                     AAGFENLGVIIDNDEKRNELLALLDELFATGTREDWVAKLRGADIVSAPINTLLEASN
                     DPDVLANGYVTEIDYPKHGKRLKVHGTPWQFSETPAKPGIAPELGEHNDAVLGELGYS
                     PADVADLRARKII"
     gene            complement(4871..>5778)
                     /locus_tag="VF991_14005"
     CDS             complement(4871..>5778)
                     /locus_tag="VF991_14005"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9557607.1"
                     /translation="KVLGHIKAVDDVSFEILAGKTLGLVGESGCGKTTTSRMILNLEA
                     PTEGQILLEGEPIHALQGAALGAYRAKVQAVFQDPWSSLNPRMKVGRTIAESLIVNAW
                     GDQARIDERVRELLLEVGLRPEQAEQYPHEFSGGQRQRVALAAALASRPKLIVLDEPV
                     SALDVSIRAQMMNLLKDIQAEDDVAYLLVAHDLATVRHMADHVVVMYLGKIVERAPTA
                     ALFADVRHPYTKALFSAVLVAGPNRHEDEIELKGEVPSPLDPPAGCRFHTRCPYVMPR
                     CPQQEPALREVSPGHAVACHLFDNA"
BASE COUNT          949 a         1887 c         1993 g          949 t
ORIGIN      
        1 cttggcacaa gccgcgcgca cggcggcatg ggcgacggcc ggtggatcgg ggcgccggga
       61 gccgcgttcc atgtaaggaa actggaaacg cagggtggca atagcgcgct cggcgagccc
      121 gtccgccagg gccgtcatcg ctctgtgcgt catgccggca ccggcgccat gcgcaagcag
      181 aagacaggct ttcgccgtcg ccggccgaag ccaaaggccg gagacggttc ctccgccgtc
      241 gatgtctatg gtcagacttc gtgccgtcat cagctatgcc gttcgcggcg atgcggcctg
      301 cagctcctcg agccggcggc ggttggtctc gatgccccag atcgccacga cgacgatctg
      361 caggatcagc aagccgatca tgaggccgag cacgccatgc aggccgtagc tcttgaacag
      421 cgccagcacg atgaagggcg agacgaccgt ggcgccgcgg cccagcatgt tgcagaggcc
      481 gttggcccgc agacgcacct cggtcgggaa cagctccgtg gtgtagacgc cgtagagcac
      541 ggcggtcagc acatagatgc cgacgatcag cacgaagccg acgccgagca gcagcgccgg
      601 ttccaccatg tagggataga tggcgccggc cgcgatgctg agcagcgacg cggcgatgat
      661 cgtcggcttg cggccaaact ggtcggccgc ccaggcgccg agcgcacagc cgaccagcga
      721 gccgccggcc agcaccatgg tgtaggtcag cgaccgggtg atgccgatgc cctgctggcc
      781 gaagaaggtg ggcagccagt tgacgaagcc gaagatcagc gtgttgaccg tgatcagcac
      841 gaccgagccg acaatcagcc gcggcagcaa ggccggcgag aacagcgacg cgaaggtata
      901 ttggggttcc ggcagggcgg gtgccggcgg cggcaggggc ttgccgcccg acgcctcgcg
      961 ctcgatcgcc tgcatcagcg cttcggcttc ggcggtccgg ccattggcct cgagccagcg
     1021 cgggctctcg ggcaggttct tgcgcaagta ccagacgatc agcgcgccga cgccggcgat
     1081 gacgaacatc ggccgccagc cgaagctcgg gatgaccagc gtgctgatga tcgaggtggc
     1141 gggaaagccc gcgacgacca ggaaggccat gaaggccatc cagcggccgc gcgacgccgg
     1201 cggcacgaat tccgtcatgg tcgaatagcc gaccacgatc tccgcgccga ggcccagccc
     1261 catcacgaag cgcgcggcga tcagccaatc catggtgggc gccgccgcgg cggcaaacga
     1321 cgccaggccg aagacgatca ggttgaactg gtaggtgaag cgccgcccgt agcggtcgcc
     1381 caaaaagccc gcgaccaccg cgccgatggt catgccgacg aaggtccagg agatgaactg
     1441 cgggacctgg gcgagcacgg cgaacttggt ctgcacggcg gcgcccagca ctgacgcgcc
     1501 gacatagaga tcgtagccgt cgaagaacat gccggcaccg atcagccaga agatgcggta
     1561 gtggaacgag gatatcggca ggcggtcgag ccgtgcgcca gcgttcaccg tggacgccat
     1621 tggtttctcc cccgagaacg ttttcttggc ggtcttctgc ggaccatcgc gtccgtcgtc
     1681 gggcgcgcgc tgtgatagtg tcatggccga gccgccctct cctactcaat ttgccttgag
     1741 cctcagccat gacgtccgac aaatccacgc tcgatgtcgt gcaaacgggc aagggccgcg
     1801 atctcgtgct gctgcactcg ctgttgtcgg accgcaccgc cttcgaccgc atcacaccgc
     1861 gtctcgccaa cgagcggcgc gtctggctgg tcaacctgcc gggcttcggc gcctcggcgc
     1921 cggccgggcc tggcctcgac gatgtcgccg accgcctcgc cggtgaactg ccgaagctcg
     1981 gcctgtcgcg cgacgccgac cttttaggca acggcttcgg cggcttcgtt gcggtggcgc
     2041 tggccgtccg tcacggcggg ctgttcgacc ggctggtcct ggtcgacacc ggcgcggcca
     2101 tcccaccgca aggcaaggat gccttcgagg ccatggcgca gcgggtcgag acaggcggca
     2161 tggaagccgt cctcagcgtg gcgctgcagc ggatgtttcc cgacgatttt ctagcggcga
     2221 atccgaccat tgccgaggag cgcaaggcgg ccctgcgcgc cgccaggccg gagaatttcg
     2281 ccgctgcgtg ccgggcgctc gcccaattcg acgcgcgctc cgcgctggcc tcgattcgca
     2341 atccgacgct ggtcgtggtc ggcctgcgcg atacggcgac gccgccggca ctgtcctacg
     2401 aacttgccaa cggcatcgcg ggcgccaagc tgatcgaact gccccactgc gggcactcgc
     2461 cgcatatcca ggatcccgaa ggtttttggc aggcgatcga gccgttcctg aagctcgcgg
     2521 ggtagcagcg gtcgctaccg caccgccggc ggcgcgcgct gcagcaagtc ggccaagggc
     2581 tgggcataga atttcgccat gccggtggtg ccgtggccgc gcgtctcctc gctggccggg
     2641 atcaggtgga ggcggccatt cttgacctgt ttcagcgcgg ccaccatcag gccggtttcc
     2701 ggcgggttgc gctcgtcgtc ggccgagttg atggcgagca gcgccgccgt gatgcgcgcg
     2761 aggccgggcg aggcgtcgta gtcgctcgag gcctcccatt gataaagata gtcgttggca
     2821 tcggcggtga acggtgccgc cagccgctcg tccaagagct tgtcggcctt ttcgcgcgtc
     2881 ggcgccatct tctggtaggc gagcgtgccg cccgaggtgg cgatggcgaa gaacaccgcg
     2941 gccgtcttga aggcgcgcgg ctgggtcgtg tagttgccgt ccttccagtc gggatcgttg
     3001 cggatcgaat cgatgatcag ccgccgcatc atccagttgc ggctcgacat cgcggtcggc
     3061 tgggcggcca tcggcgccag cgcgtccatg aagtcgggat atcgctcgcc ccacagccag
     3121 gtgtgcatgc cgcccatcga attgccgatc accaggcgca ggtgggacac gcccaggcct
     3181 tccttgagca ggcgatactg ggcgtcgacc atgtcggcgt agtcgtattt ggggaatttt
     3241 gcccgcagcc cgtcggacgg tttggacgat ttgccgtggc cgatcccatc cggaatgatg
     3301 atgtagtact tcgcggcatc gagcggctgg ccggcaccga acagttcgcc ggcgaaggaa
     3361 ggcgtcagca tgctggctgc cgagccggtc gtcccgtgca gcaccagcac cggctgcccg
     3421 gaaggctcac cgatcgtggt gtagtgcagg cgcagctcgg gcaccacctc gccgctatgg
     3481 aacttgaagt cgcgcgcgat ccagtcgccc tgtttgggcg ggggatagtc ggccgccgag
     3541 gccgtcgtcg tcacgattgc caggacgaat gccactgcaa cacggaaacg ggtcatcgaa
     3601 ggcctcccta tcgtgttctt gtccgagctt ggcgtattag atgatcttcc gcgcccgcaa
     3661 atcagccacg tcggcagggc tatagcccag ctcgcccagc accgcgtcgt tgtgctcgcc
     3721 cagttccggc gcgatgccgg gcttggcggg agtctcggag aattgccagg gcgtgccgtg
     3781 caccttcagg cgcttgccgt gcttggggta gtcgatttcg gtgacgtagc cgttggccag
     3841 cacgtcggga tcgttggagg cttcgaggag tgtgttgatc ggcgccgaca cgatgtcggc
     3901 cccgcgcagc ttggcgaccc agtcctcgcg tgtgccggtg gcgaagagct cgtcaagcaa
     3961 cgccagcaat tcgttgcgct tctcatcgtt gtcgatgatg acgccgagat tctcgaagcc
     4021 ggccgccttg atgcggggat ggaaacccag cgccgtcatg gcgtccttcc agttttccgg
     4081 cccggtgagc tggaacacca ggggcttgcc gtcgcggtcg ttgaaggagg cgctgatacc
     4141 ggggcgctgc gcggtgccgg tgatgcgggc ctggccggtc accgggttct ggttgcgcca
     4201 catcgtggtg gtgaaggtcc agcccatcag ccgaaccagc gagccgagca gcgacagctc
     4261 gatcttctga ccgatgccgg tggtgcgcgc ataggtgagt gcggcgagcg cgccgccgaa
     4321 ggccagcatg gccgtcgatt cgtcagccac cgaggcgacg ccggtccgca tcttctggcc
     4381 cggcatggaa taggcctcgg cgatgccgcc cagcgcctgg gccatcgaat cggtgcccgg
     4441 cagatgggcg tgcggcccct tggggccgta gcccgagatc gagacataga ccagcttggg
     4501 attgaccttg cgcaactcct cccagccaaa accgttcttc tcggcggcac cgggacggaa
     4561 gttctggccg aagatgtcgg cacgggccac gagcttgtgc aggatggcgc ggccttcggc
     4621 cgccttgagg ttcagcgtca cgctcttcac gccgcgattg ttggtctcga agaaggtgct
     4681 gggcatgccc ggcaacacgg tcatgtggcg cgagccgtcg ccaccctccg gcacctcgat
     4741 cttgatcacg tcggcgccga gatcggccat cagcatccag ggcacggtgc cggcctgcgc
     4801 ggtcgagcag gagacgacct tgacgccctg caacgggccg tgcggtgggg acatttgacg
     4861 catctcctaa ctaggcattg tcgaacaagt gacaggcgac ggcgtgaccg ggcgagacct
     4921 cgcgcaacgc cggctcctgc tgcgggcagc gcggcatgac gtaggggcag cgcgtgtgga
     4981 agcggcagcc ggccggcgga tcaagcggcg acggcacctc gcccttgagc tcgatctcgt
     5041 cctcgtgccg gttcgggccc gccaccagga cggccgagaa caaggccttg gtatagggat
     5101 ggcgaacgtc ggcgaacagg gcagcggtcg gcgcccgctc gacgatcttg ccgagataca
     5161 tcaccaccac atggtcggcc atgtggcgca cggtggcgag atcgtgcgcc accagcaggt
     5221 aggccacgtc gtcctcagcc tggatgtcct tcaacaggtt catcatctgg gcgcggatcg
     5281 acacgtcgag cgccgagacc ggctcgtcga gcacgatcag cttgggccgc gaggcgagtg
     5341 ccgcggcaag cgccacgcgc tggcgttggc cgccgctgaa ctcgtgcggg tattgctcgg
     5401 cctgctcggg ccgcaagccg acctcgagca gcagctcgcg cacgcgctcg tcgatcctgg
     5461 cttggtcccc ccaggcattc acgatcagcg attcggcgat ggtccgtccc accttcatac
     5521 gtgggttgag cgacgaccag ggatcctgga acaccgcctg caccttggcg cggtaggcgc
     5581 cgagtgcggc gccctgcaga gcgtggatcg gctcgccctc gagcaggatc tggccctcgg
     5641 tcggcgcctc gagattgagg atcatgcgcg aggtcgtggt cttgccgcag cccgattcgc
     5701 ccaccaggcc gagcgtcttg ccggccagga tctcgaacga gacgtcgtcg accgccttga
     5761 tgtggccgag caccttgg
//
LOCUS       DASWGA010000598         2371 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_442382, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000598 DASWGA010000000
VERSION     DASWGA010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442382"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /locus_tag="VF991_14010"
     CDS             <1..618
                     /locus_tag="VF991_14010"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEX9557608.1"
                     /translation="ALFNLPPGDWSKGERGLAALPGREAEFSAALDKALDYAKALECR
                     TLHVMSGMIAPGADVKAMHRTFIANLKKACDRTAKSGLTLVLEPINHRDIPGYFTNTT
                     DQVKQIIDEVGAPHLRLQLDLYHMQVTEGDLTKRTERLFPITAHVQIAGNPDRNEPDI
                     GEANHLYLLDVLDRLGYQGYVGLEYKPKTTTGAGLGWAAKYGIKA"
     gene            622..1536
                     /gene="ltnD"
                     /locus_tag="VF991_14015"
     CDS             622..1536
                     /gene="ltnD"
                     /locus_tag="VF991_14015"
                     /EC_number="1.1.1.411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonate dehydrogenase"
                     /protein_id="HEX9557609.1"
                     /translation="MADNNTPLVAFVGLGSMGLGMAKNLLKGGHKVTGVDPSAPAREA
                     FAAAGGTLAATPAQAAASADALVVAVVNAQQVETVLFGEGGAVAKLRKGGLVMQCATV
                     PPAFAKALGERLARSSHELLDAPMSGGRARAEAGELTFMASGSAKAFAAAESILAATS
                     ATVFRLGDAPGIGSLVKTVNQLLAGVHIATAAEAMALAAKAGADTRAVYEVISASAGN
                     SWMFGNRVPHMLDDDYSPLSAVEIFVKDLGLVLNTGHEHRLPLPMAAAAHQLFLAASG
                     AGWGRLDDAAVVKVYEQAGDFKVSSPRK"
     gene            1546..>2371
                     /gene="pyk"
                     /locus_tag="VF991_14020"
     CDS             1546..>2371
                     /gene="pyk"
                     /locus_tag="VF991_14020"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEX9557610.1"
                     /translation="MPRQRFTKIVATLGPASSSIERLRALFEAGADVFRLNFSHGTHD
                     DHRRRVDLLRALEKEYGHPVAVLMDLQGPKLRLGAFAKGPLELKKGQKLRLDMDKAPG
                     TAKRVPLPHPEIFKAAKPGGLLLIDDGKVRLRIVAHDDDTIDTEVEVAGLISDRKGVN
                     LPNLVVPLSPMTPKDRKDLDYGLSLGVDWVALSFVQHANDIAELKKLVAGRAAVMAKL
                     EKPAAIDHLDEIIEQSDGIMVARGDLGVEMPPEAVPPLQKRILAACRVAGRPAIVAT"
BASE COUNT          396 a          830 c          781 g          364 t
ORIGIN      
        1 gcgctgttca atctgccgcc cggcgattgg agcaagggcg agcgcgggct ggccgccctg
       61 cccggccgtg aagccgagtt ttcagccgcc ctcgacaagg cgctcgacta cgccaaggcg
      121 ctggagtgcc gcaccttgca tgtcatgtcg ggcatgatcg cgcccggcgc cgatgtgaag
      181 gcgatgcacc gcactttcat cgccaacctg aagaaagcct gcgaccgcac cgcaaagagc
      241 ggtctcacgc tggtgctgga gccgatcaac catcgcgaca ttcccggcta cttcaccaac
      301 acgaccgatc aggtgaagca gatcattgac gaggtcggcg cgccgcacct gcgcctgcag
      361 ctcgacctct atcatatgca agtgaccgag ggagacctca ccaagcgcac cgagcgtttg
      421 ttcccgatca ccgcgcatgt gcagatcgcc ggcaatcccg accgcaacga gcccgacatc
      481 ggcgaggcca accatctcta cctgctcgat gtgctcgacc ggctgggcta tcagggctac
      541 gtcggcctcg aatacaagcc caagaccacg accggcgccg ggctgggctg ggcggcgaaa
      601 tacggcatca aggcctgatc catggcggac aacaacactc ccctcgtcgc cttcgtcggc
      661 ctgggctcga tgggcctcgg catggcgaag aacctgttga agggcggcca taaggtgacc
      721 ggcgtcgatc ccagcgcgcc ggcgcgcgaa gccttcgctg ctgcgggcgg cacgcttgcg
      781 gcgacgcccg cgcaagccgc tgcatcggcc gacgcgcttg tcgtcgccgt ggtcaatgcg
      841 cagcaggtcg agactgtgct gttcggcgaa ggcggcgcgg tcgcgaagct gcgcaagggc
      901 ggcctcgtca tgcagtgcgc caccgtgccg cccgccttcg ccaaagcgct cggcgagcgg
      961 ctggcccggt cgagccacga acttttggac gcgccgatgt cgggcggccg cgcccgcgcc
     1021 gaagcgggcg agctcacctt catggcctcg gggtcggcca aggcctttgc cgccgccgag
     1081 tcgatcctgg ccgccacctc ggccacggtg ttccgcctgg gcgatgcgcc cggcatcggc
     1141 tcgctggtga agaccgtgaa ccagcttttg gccggcgtgc atatcgccac cgccgccgag
     1201 gcgatggcgc tcgccgccaa ggccggcgcc gatacgcgcg ccgtctacga ggtgatctcg
     1261 gccagcgccg gcaattcctg gatgttcggc aatcgggtgc cgcacatgct ggacgacgac
     1321 tactcgccgc tgtcggcggt ggaaatcttc gtcaaggatc tcgggctggt gctcaacacc
     1381 ggccacgagc atcgcctgcc gctgcccatg gcggccgcgg cgcaccagct ctttctcgcc
     1441 gcttcaggcg ccggctgggg gcgactggat gacgctgccg tcgtcaaggt ctacgaacag
     1501 gccggcgact tcaaagtgtc gtcgcctcgg aagtagactg cgccaatgcc tcgccagcgt
     1561 ttcaccaaga tcgtcgccac cctggggcct gcgtcctcca gcatcgagcg tttgcgcgcc
     1621 ctgttcgagg ccggcgccga cgtcttccgg ctcaatttca gccacggcac ccacgacgat
     1681 catcgccggc gcgtcgacct gctgcgcgcg ctcgagaagg agtacggcca tcccgtcgcc
     1741 gtgctgatgg atctgcaggg gccgaagctc aggctcggcg ccttcgccaa gggaccgctc
     1801 gagctcaaga agggtcagaa gctgcgcctc gacatggaca aggcgccggg cacggccaag
     1861 cgcgtgccgc tgccccatcc cgagatcttc aaggcggcca agccgggcgg gctgctgctg
     1921 atcgacgacg gcaaggtgcg gctgcgcatc gtcgcgcacg acgacgacac gatcgacacc
     1981 gaggtcgagg tcgccggcct gatcagcgac cgcaagggcg tgaacctgcc caacctcgtg
     2041 gtgccgctgt cgccgatgac gcccaaggac cgcaaggacc tcgactacgg tctgtcgctc
     2101 ggcgtcgatt gggtggcgct ctccttcgtg cagcatgcca acgacatcgc cgagctaaag
     2161 aaattggtgg cgggccgcgc cgccgtgatg gccaagctcg agaagcccgc cgccatcgac
     2221 catctcgacg agatcatcga gcagagcgac ggcatcatgg tggcgcgcgg cgacttgggt
     2281 gtggagatgc cgccggaagc ggtaccgccg ctgcagaagc gcatcctcgc cgcctgccgc
     2341 gtcgccggcc ggccggccat cgtggcgacg c
//
LOCUS       DASWGA010000599         3485 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_68785, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000599 DASWGA010000000
VERSION     DASWGA010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3485
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68785"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..166)
                     /locus_tag="VF991_14025"
     CDS             complement(<1..166)
                     /locus_tag="VF991_14025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9557611.1"
                     /translation="MVQPFPPGMRVEEVETDGATIHARVGGQGPAVVMLHGFGDTGDM
                     WAPLANALVAD"
     gene            complement(166..903)
                     /locus_tag="VF991_14030"
     CDS             complement(166..903)
                     /locus_tag="VF991_14030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX9557612.1"
                     /translation="MAGKIYVGVGGWTFEPWRGTFYPEGLTHKRELEYASRKLTSIEI
                     NGTYYSSFKPASWAKWRAETPDGFVFAMKASRFCTNRRQLGEAGDSVARFVGQGLVEL
                     GDRLGPINWQFMATKKFDPEDIEAFLKLLPREAGKLPLRHALEVRHPSFKDRRFYDLA
                     RKYNAAIVYAHDEDFPEIDEPTADFTYARLMGAQEKVKTGYKPADIDKWAKRAKAWAK
                     RGDAFVYFISGAKLRNPAAAQALIAKV"
     gene            1012..1449
                     /locus_tag="VF991_14035"
     CDS             1012..1449
                     /locus_tag="VF991_14035"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9557613.1"
                     /translation="MSTPTEVEAEIHAIMKARVEAVHAKDAARLVAHHAADVLAYDLL
                     EPLQYKGVADLRRRVQQWFDGYDGPMTYEIRDLQVVAGYDAAFCHGLHHVAGKTVAGR
                     TIDMWWRATQGFRRIDGQWRIVHEHSSVPFDMTSGKVSFDLKP"
     gene            1464..1946
                     /locus_tag="VF991_14040"
     CDS             1464..1946
                     /locus_tag="VF991_14040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9557614.1"
                     /translation="MAIQQKITPFLWLDANAEEAVGFYTSVFKESRIVTRSRYGDSGP
                     GPKGSIMAVAFKLEGQDFVAINGGPDFKFSEAISFYVNCETQEEIDRLWNTLVAGGEE
                     RDCGWLKDRYGLSWQVNYAGLQDMMADSHADRADRAMTAMLKMKKIDIQRLKDACDGR
                     "
     gene            complement(1953..3287)
                     /locus_tag="VF991_14045"
     CDS             complement(1953..3287)
                     /locus_tag="VF991_14045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557615.1"
                     /translation="MTETRPASPPHPSPRSLGRLDWFVFLIADVQTGFGPFVAVYLTA
                     QHWTQIDIGLVLTVAGLVSLFGQIPGGALIDAVRSERVVAAIGVSMIAAAALIYATFP
                     IFPAVLLAATMQAAASCVLGPAIAAISLGLVGHAAIGERFGRNARFASIGAGLSAGVM
                     GAVGYLFSTQAVFFVTAALLIPALFVLHGIDPKEIDPERAHGNLSEEPAGKPRADLRS
                     LLRQRPLLVFGCCILLFHFANAAMLPLMGSVLTTRLSQLAPVLIAACIVGPQLVVALF
                     SPWVGRQTQRWGRRPLLIAGFAVLPIRGFLFAVVTDPYLLVAVQLLDGLTAAIFNVMV
                     PLTVADLTRGTGRFNLTQGVVGTMMGAGAALSPTFAGYLSDTFGSPIAFAGLAAIAVV
                     GLATVGLLMPETRPAQSSADTEPRAESETSEPVPPHEVGRWPKAGGVKARRR"
     gene            complement(3298..>3485)
                     /locus_tag="VF991_14050"
     CDS             complement(3298..>3485)
                     /locus_tag="VF991_14050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PRC-barrel domain containing protein"
                     /protein_id="HEX9557616.1"
                     /translation="LGVGSRKIAVDWKALHFVPAADKRYGIVLELTRDQVKPAPEYKE
                     GKPIVVLGASGNLETLP"
BASE COUNT          628 a         1121 c         1194 g          542 t
ORIGIN      
        1 gatcggcgac cagcgcgttg gcgagcggcg cccacatgtc gccggtatcg ccgaagccgt
       61 gcagcatgac gaccgcaggc ccctggccgc cgaccctcgc atggatcgtg gcgccgtcgg
      121 tctcgacttc ttcgacgcgc atgccaggag ggaagggctg aaccatcaga cttttgcgat
      181 cagcgcctgg gcggcggccg gattgcgcag cttggcgccc gagatgaaat agacgaaggc
      241 gtcgccccgc ttggcccacg ccttggcgcg cttggcccac ttgtcgatat cggcgggctt
      301 gtagccggtc ttcaccttct cctgggcgcc catcaggcgg gcataggtga agtcggccgt
      361 gggctcgtcg atctccggga agtcctcgtc gtgggcgtag acgatggcgg cattgtactt
      421 gcgcgcgaga tcgtagaacc gccgatcctt gaagctcgga tgacggactt ccagcgcatg
      481 gcgcagcggc agcttgcccg cctcgcgcgg cagcagcttg aggaacgcct cgatgtcctc
      541 cggatcgaat ttcttggtcg ccatgaactg ccagttgatg ggacccagcc ggtcgcccag
      601 ttcgaccagc ccctggccga cgaagcgtgc caccgagtcg ccggcttcgc caagctggcg
      661 ccggttggtg caaaagcgcg aggccttcat ggcaaagacg aagccgtcgg gcgtctcggc
      721 gcgccacttg gcccagctcg ccggcttgaa gctggaatag taggtgccgt tgatctcgat
      781 cgaggtgagc ttgcggctgg catattccag ctcgcgcttg tgggtgaggc cctcgggata
      841 gaacgtcccg cgccacggct cgaaggtcca gccgccgaca ccgacataga tcttgcccgc
      901 catcgctcgc tcctcaccgg accgtggcga cctagcatag gctgcaggtc cgtactagcg
      961 cgcctggcga gaggaacggc gatacgtcgg cggcgttgtc gtcgtatgac gatgagcacc
     1021 cccaccgaag tcgaggccga aatccacgcc atcatgaagg cgcgcgtcga ggccgtgcac
     1081 gccaaggacg cggctcggct ggtcgcccat catgccgccg atgttctggc ctacgacctg
     1141 ctcgaacccc tgcagtacaa gggtgtcgcg gatctacgcc ggcgcgttca gcaatggttc
     1201 gacggctatg acggtccgat gacctacgag atccgcgact tgcaggtcgt ggcgggctac
     1261 gacgcggcgt tctgccatgg cctgcaccat gtggcgggca agaccgtcgc gggccggacg
     1321 atcgacatgt ggtggcgcgc cacccagggc tttcgccgca tcgacggcca gtggcgcatc
     1381 gtgcacgagc acagctccgt gcccttcgac atgacgagcg gcaaggtctc gttcgatctg
     1441 aaaccctgag acggagaaga ttggtggcga tccagcaaaa gatcacgcca ttcctgtggc
     1501 tcgacgccaa tgccgaggag gcggtgggct tctatacctc cgtcttcaag gagtcgcgca
     1561 tcgtcacgcg gtcgcgctat ggcgatagcg gcccggggcc gaaagggtcg atcatggcgg
     1621 tcgccttcaa gctcgaaggc caggatttcg tcgccatcaa cggcggcccc gatttcaagt
     1681 tcagcgaggc gatctcgttc tacgtcaatt gcgagaccca ggaggagatc gaccggctgt
     1741 ggaacacgct cgtcgccggc ggcgaggagc gcgactgcgg ctggttgaag gaccgctatg
     1801 ggctgtcctg gcaggtcaat tatgccggcc tgcaggacat gatggccgac tcccatgccg
     1861 accgcgccga cagggcgatg acggccatgc tcaagatgaa gaagatcgac atccagcggc
     1921 tgaaggacgc ttgcgacggc cgctagggtg catcagcgcc ttcgcgcctt gacccctccg
     1981 gccttcggcc acctccccac ttcgtgggga ggaaccggct cggaggtttc ggactctgct
     2041 ctgggctcgg tgtccgctga gctttgggcc ggccgggtct cgggcatcag cagcccgacc
     2101 gtcgccaggc cgaccaccgc gatggccgcc agcccggcaa aggcgatcgg gctgccgaac
     2161 gtgtcgctca ggtagccggc aaaggtcggg ctgagggccg cgcccgcgcc catcatggtg
     2221 ccgaccacgc cctgggtgag gttgaagcgt ccggtgccgc gcgtcaggtc ggcgacggtc
     2281 aagggcacca tgacgttgaa gatagcggcg gtcagcccat ccagaagctg aacggcgacc
     2341 aagaggtaag ggtccgtcac cacggcgaag agaaatccgc ggatcggcag aacggcgaag
     2401 cccgcgatca gcagcggccg gcgcccccag cgttgcgtct gtcggccgac ccacggcgag
     2461 aacagcgcca cgacgagctg cggcccgaca atgcaggcgg cgatcagcac cggcgctaat
     2521 tggctcaagc gggtcgtgag cacgctgccc atcaggggaa gcatggctgc attggcgaag
     2581 tggaacagca ggatgcagca gccgaacacc agcagcggcc gctgacgcag aaggctgcga
     2641 aggtcggcgc gcggcttgcc ggccggctct tcggacaggt tgccatgagc ccgttccgga
     2701 tcgatctcct tgggatcgat gccgtgcagc acgaacaggg cggggatcaa gagcgcggcc
     2761 gtgacgaaaa agaccgcttg ggtggagaag aggtagccga cggcgcccat cacgccggct
     2821 gaaagccccg caccgatcga agcgaagcgc gcattgcggc cgaaccgttc gccgatcgcg
     2881 gcatggccga ccaagccgag actgatcgcg gcgatggcag gccccagcac gcaactcgcg
     2941 gcggcctgca tcgtcgccgc cagcagcacg gccgggaaga tcgggaacgt cgcgtagatc
     3001 agcgccgcag cggcgatcat cgagaccccg atggcggcga cgacgcgctc ggagcggacg
     3061 gcatcgatca gcgcgccgcc cggaatttga ccgaacagcg agaccaggcc cgcgacggta
     3121 agcaccaggc cgatgtcgat ctgcgtccag tgctgcgccg tcaggtagac ggcgacgaac
     3181 gggccgaagc cggtctgcac gtcggcgata aggaagacga accagtcgag cctccccagg
     3241 ctgcgcggcg aggggtgggg cggcgaagca gggcgggtct ccgtcaccga cggcctgcta
     3301 gggcagggtt tcgaggttgc cggatgcccc cagcacgacg atcggcttgc cctccttgta
     3361 ttccggcgcc ggcttcacct gatcgcgcgt gagttcgagg acgatgccat atcgcttgtc
     3421 ggcggcggga acgaaatgca gggccttcca gtcgaccgcg atcttgcggc tgccgacgcc
     3481 gagaa
//
LOCUS       DASWGA010000600         2041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1330457, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000600 DASWGA010000000
VERSION     DASWGA010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1330457"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VF991_14055"
     CDS             complement(<1..284)
                     /locus_tag="VF991_14055"
                     /inference="COORDINATES: protein motif:HMM:NF021364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding domain-containing protein"
                     /protein_id="HEX9557617.1"
                     /translation="MRDTTKADRITLLDVYRDGYALRLIEVLTSDYPGLMAMAGPADF
                     DHMARAYIATHPSRHPSIRWYGKDVADFLSSTPPYSRTPAAAEMARFEWAL"
     gene            complement(429..1786)
                     /locus_tag="VF991_14060"
                     /pseudo
     CDS             complement(429..1786)
                     /locus_tag="VF991_14060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006335293.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
BASE COUNT          318 a          701 c          674 g          348 t
ORIGIN      
        1 agcgcccatt cgaagcgcgc catctccgcc gccgccggcg tgcggctgta gggcggcgtc
       61 gagctcagga aatccgccac gtccttgccg taccagcgta tcgaaggatg acgcgacggg
      121 tgggtcgcga tataggcccg cgccatgtgg tcgaaatcgg ccgggccggc catcgccatc
      181 aggccgggat agtcgctggt caatacctcg atcaggcgca gcgcgtagcc gtcgcgatag
      241 acgtcgagca gcgtgatccg gtcggccttc gtggtgtcgc gcaccgccgc ctggaaggcg
      301 tcgctgctcg ccagcaggta gtcctggaag gcccgctgca ggtcacctag cagcctgtcg
      361 gactgaggtc tgtgagttga gagccgaaga gatggaatgg caggtgtgtc acaagtttgg
      421 ctttctcgtc aggcgccggc gagggcgaac atgcgcttga tgttccaggc catggtgacg
      481 aggctccact cgcctctaac cttgtcgagg ccgcgcaaca agaattgccg gaaccccatc
      541 accgattgat gatgccgaac accggctcgg gggtttgctt gcgcagggcg tagagccgct
      601 tgccctcggg ggttgccagt cggtggccca tggcggcgag cggcgtcggg ttgtcgggcg
      661 ccggcggtgc ggcggcgaaa cgctcgcgcc aggaccgatg atggcgttcg cggcccagcg
      721 cgatcagcgg cgcgatcttg gcttcggcgc aggccgtcac attggcggcg ctgaaatagc
      781 cgctgtcggc gagcagggtc tcgggcgtgc ccagcgcctt gggcagccgg gcaagctgct
      841 ccagcgtcgg cacgatctgc tgcttgtcgt tggcggcctg caccacatcg gcggcgacca
      901 ccagcatcga gcccgccgcc accgcggctt gggcgttgta ggcttgctcg aagccgccgc
      961 cggccatcgg catgatgcgc gagtcttcat ccgtcaggtt gatctggtcc gtggcgtcgg
     1021 gctctgccgt cggcggcgcc ggcggcttgc cgcccggctt cttgcctgtc gccttcgcct
     1081 tgtccgcgcg tgccttcagc ttggcctcat gctcggcctg ctcgcgctca aagcgctccc
     1141 tggcccgcgc ctcgatcttg gccttggcct cggcaagccg ggccagccgc tcctcgcgcc
     1201 gcgccagctc ttgcggcacc gacaggccgt ccggcaggtc ggcgcggtcg gccgcctcgg
     1261 ccagcgccag aagctccgcc acctcggcct tcagctgcgc ttcgatctgg ctggcatgct
     1321 cgtaggacag cgcgctgtgc cggctggcat tggcgtggag cttggtgccg tccagcgcca
     1381 ccgtgcccag ctgcagcatc cccatctcgc gcgccagcag cagcacgccc acgaacagcg
     1441 tcccgatctc cgcgagaaag cgccgccgga agctggcgat ggtgtcgtgg tcgggatggt
     1501 cgttggcggc gatgaagcgg aaggccaccg aatcataggt cgcccgctcc agcttgcggc
     1561 tcgaaaatat cccggtggcg tagccataga ccaccagccc gagcagcatg ctcgggtgat
     1621 acgacgccga gcccgacccg cgatacgact tcaccatcgc actcaggtcc tgccgctcga
     1681 tcacctcgac cacaaaccgc gccaggtgct gctcgggcag ccactcgtcc accgacggcg
     1741 gcagcaggaa cccggtctga cggtcaactt gccggaaatt gctcatcgcc cacacactcg
     1801 ctcgacagac aaccactcag gccaatgaat ctctttccag ccctcagctc aagtccgaca
     1861 ggctgctaga gccgacgata tagtcgcccg aagatgggga gcaattccat gaccaagatg
     1921 atccaccgct gcagggcgat ggccggcacg cttgttgcac cgatgctggc ccgccacggc
     1981 tgggcgcagt cggcctatcc caacaagcag atccgcatgg tggtgccgtt cgctgccgcc
     2041 g
//
LOCUS       DASWGA010000601         1726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_68962, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000601 DASWGA010000000
VERSION     DASWGA010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68962"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1692
                     /locus_tag="VF991_14065"
     CDS             <1..1692
                     /locus_tag="VF991_14065"
                     /inference="COORDINATES: protein motif:HMM:NF014805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX9557618.1"
                     /translation="IRAMGSKSEAKKIMEKAKVPLVPGYHDDDQSPDLLAKKAARIGF
                     PVLIKASAGGGGKGMRVVESAEKFADALAGAQREAKASFADDHVLIEKYLTRPRHIEI
                     QVFADSHGNCLSLFERDCSIQRRHQKVIEEAPAPNMDPARRQAMGNAAVAAARAIGYQ
                     GAGTVEFIADQDGTFYFMEMNTRLQVEHPVTEAITGQDLVEWQLVVAAGGEMPLRQEQ
                     LGIDGHAVEVRLYAEDPARNFLPSTGTLVHLRLPEEGPHVRVDTGVREGDTVTPFYDP
                     MIAKVIVHDRDRTSALRRMATLMGQTEVVGVTTNAPLLAALCAHPAFVGGEIDTGFIE
                     RHRDELFAKAAAADDRAFAVATLARLVEWQEAAEAAARASGDPFSPWNGQGAFRLLDE
                     GHDEVRWKDGERDVAVIARRRRDGSVGLELPGGTLEGRVRRGDDGRLAIGLGGDTFTA
                     AVVRRQTADGVDYTLFADGTSRRLRLVDPLDVTQYETAGAAEDKVRSPLPGKIIDLRV
                     KPGDKVSKGQPLLVLEAMKMEHTLAAPADGTVKSVRYAVGEQVAEGAELVEFEAG"
BASE COUNT          289 a          564 c          622 g          251 t
ORIGIN      
        1 atccgcgcca tgggctccaa gagcgaagcc aagaagatca tggaaaaggc caaggtaccg
       61 ctggtgccgg gctatcacga cgacgatcag tcgcccgatt tgctggccaa gaaagcggcc
      121 cgcattggct ttccggtgct gatcaaggcc tcggctggcg gcggtggcaa gggcatgcgg
      181 gtggtcgaga gtgcggagaa gttcgccgat gccctggccg gcgcccagcg cgaggccaag
      241 gcctcgttcg ccgacgatca cgtgctgatc gagaagtacc tgacgcggcc gcgccacatc
      301 gagatccagg tcttcgccga ctcgcacggc aactgcctct ccctcttcga gcgcgactgc
      361 tcgatccagc gccgtcatca gaaggtgatc gaggaagcgc cggcgcccaa catggacccg
      421 gcgcggcgcc aggcgatggg caatgccgcg gtcgccgccg cccgggccat cggctatcag
      481 ggcgccggca ccgtcgagtt catcgccgac caggacggca ccttttattt catggagatg
      541 aatacgcgcc tgcaggtcga gcatcccgtc accgaggcga tcaccggcca ggacctggtc
      601 gaatggcagc tcgtggtggc ggccggtgga gagatgccgc tccggcagga gcagctcggg
      661 atcgacggcc atgccgtcga ggtccggctc tatgccgagg atccggcgcg caacttcctg
      721 ccgtcgaccg gcacgctcgt tcatctgcgc ttgccggagg agggcccgca tgtgcgggtc
      781 gataccggcg tgcgcgaggg cgataccgtc acgccgttct acgatcccat gatcgccaag
      841 gtgatcgtgc acgaccgcga ccggacctcg gcattgcgcc ggatggcgac gctgatggga
      901 cagaccgaag tggtgggtgt caccaccaat gccccgctct tagcggcgct gtgcgcacat
      961 ccggccttcg tcggcggcga gatcgatacc ggcttcatcg agcgccaccg tgatgagctc
     1021 ttcgccaagg cggccgcggc cgacgaccgg gccttcgccg tcgccaccct ggcgcgtctc
     1081 gtcgaatggc aggaggcagc ggaggccgct gcccgcgcgt ccggcgatcc gttctcgcca
     1141 tggaacggac agggggcgtt ccgcctgctc gacgagggcc acgacgaggt gcgctggaag
     1201 gacggcgagc gcgacgtggc ggtgattgcc cgccgccggc gcgacggcag cgtcggcctg
     1261 gagttgcccg gcggcaccct cgaagggcgg gtgcggcgcg gtgacgacgg acggctggcc
     1321 attggcctgg gcggcgacac gttcacggcg gcggtggtgc gccggcagac cgccgacggc
     1381 gtcgactaca cgctgttcgc cgacggcacg agccggcgcc tgcggctggt cgatccgctc
     1441 gacgtgacgc aatacgagac cgccggcgcg gccgaggaca aggtgcgctc gccgctgccc
     1501 ggcaagatca tcgatctcag ggtcaagcct ggcgacaagg tcagcaaggg ccagccgctg
     1561 ctggtactcg aagccatgaa gatggaacac acgcttgccg cgccggctga cggcacggtc
     1621 aagagcgtgc gctacgccgt cggcgagcag gtcgccgagg gcgcagaact ggtagagttc
     1681 gaagcagggt gatcgacggc ctggcgggtt gtcggtcgca ggagga
//
LOCUS       DASWGA010000602         2813 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2346213, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000602 DASWGA010000000
VERSION     DASWGA010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2346213"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VF991_14070"
     CDS             complement(<1..423)
                     /locus_tag="VF991_14070"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000344297.1"
                     /note="NADP-dependent; catalyzes the oxidative
                     decarboxylation of malate to form pyruvate; decarboxylates
                     oxaloacetate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HEX9557619.1"
                     /translation="MADELTESALRYHRLPRPGKIEVVPTKPLATQRDLSLAYSPGVA
                     AACHEIVRDPGTVAELTARANLVAVVTNGTAVLGLGAIGPLAAKPVMEGKGVLFKKFA
                     GIDVFDLELAENDQEKLVDMVAALEPTFGGINLEDIKAP"
     gene            complement(517..601)
                     /locus_tag="VF991_14075"
     tRNA            complement(517..601)
                     /locus_tag="VF991_14075"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(565..567),aa:Leu,seq:gag)
     gene            716..1396
                     /gene="lipB"
                     /locus_tag="VF991_14080"
     CDS             716..1396
                     /gene="lipB"
                     /locus_tag="VF991_14080"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEX9557620.1"
                     /translation="MNQPEWRISDGAVPYAEALAVMEGRVADIHAGRERELVWLLEHP
                     PLYTAGTSAKPHDLLQPMRFPVHVAGRGGQYTYHGPGQRVVYAMLDLRARRQDVRRFV
                     FDLEEWTLRALARFSITAERRTGRVGVWVARPDKPPLPDGSAREDKIAAVGVRIRHWV
                     SFHGLSINVEPDLSHYAGIVPCGIADHGVTSLVDLGLTVSLADLDIALAETFDEVFGA
                     AVRPSEAA"
     gene            complement(1374..1652)
                     /locus_tag="VF991_14085"
     CDS             complement(1374..1652)
                     /locus_tag="VF991_14085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEX9557621.1"
                     /translation="MQAARLRIVGRVQGVGYRDWAIRTARTLGLRGWVRNRTDGSVEV
                     LIAGDEAAVSAMIDACRRGPSHGRVDNVDVQSADATGLPDRFTQLPTA"
     gene            complement(1660..>2813)
                     /locus_tag="VF991_14090"
     CDS             complement(1660..>2813)
                     /locus_tag="VF991_14090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009451767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX9557622.1"
                     /translation="YKSAGTVEFIVDKHRKFYFLEMNTRLQVEHPVTELVTGLDLVEL
                     MIRVAAGEKLPLQQKDVKLNGWAVEARLYAEDPFRNFLPSTGRLVKYREPAPGPDVRV
                     DTGVYEGGEISMFYDPMIAKLCAYGKSRIDAIERMRRALDEFYVRGVSHNVSFLAALM
                     AHPRFREGRLTTNFIAEEFKGGFTAAHLPPRDPAMLAAIAAVADRIKAARLGVKQDSR
                     VVLLNRQPVALTVTGNGPEFDVDVGDRRLVIEIGWSPGEPLMRAKVDRQTVVVQIDTV
                     GSGWRLTHEGGQAEALVLTPRQAELYALMPVKAAPDTSKFLLSPMPGLLASVAVSEGQ
                     EVKTGEVMAVVEAMKMENVLRATRDGTVKTLHAKAGDSLRVDQKIIEFA"
BASE COUNT          444 a          975 c          922 g          472 t
ORIGIN      
        1 cggcgccttg atgtcctcga gattgatgcc gccgaaggtg ggctccaggg ccgccaccat
       61 gtcgaccagc ttttcctggt cgttctcggc cagttcgagg tcgaagacat cgatgccggc
      121 gaacttcttg aacaggacgc ccttgccctc catcaccggc ttggcggcga gcgggccgat
      181 ggcgccgagc ccgagcaccg ccgtgccgtt ggtcaccacc gccaccaggt tggcgcgcgc
      241 cgtcagctcg gccaccgtgc cgggatcgcg cacgatctcg tggcaggccg ccgccacgcc
      301 cggcgaatag gcgagcgaga ggtcgcgctg ggtggccagc ggcttggtcg ggacgacctc
      361 gatctttccc ggacgcggca ggcgatggta gcgaagcgcg ctttcggtga gttcgtccgc
      421 caagcccgcc tcccgcctgt agccacaaaa agggccgcca actgagtgcc aattgggcgg
      481 cgatcggatc accttttcga tcgaaaccgg cttttatggt gcggccgaga agactcgaac
      541 ttccacgcct cgcggcacta gcacctcaag ctagcgcgtc taccaattcc gccacggccg
      601 cgccggattc gacggggcgg gggataccaa ataggcccct cagtggcaag gcaactcggc
      661 agacgcgacg ccggaggcta ttgcgccgag gcccggaagc tccgattttg ccgcaatgaa
      721 ccagccggaa tggcgcattt ccgacggcgc ggtgccttat gcggaggcat tggcggtcat
      781 ggagggccgc gtggccgaca tccacgccgg ccgcgagcgc gagctcgtct ggctgctcga
      841 gcatccgccg ctctataccg cgggcaccag cgccaagccg cacgacctgc tgcagcccat
      901 gcgttttccg gtccatgtcg ccggccgcgg cgggcagtac acctatcacg gtcccggcca
      961 gcgcgtggtc tacgccatgc tcgacctgcg cgcccgccgc caggacgtgc ggcgcttcgt
     1021 gttcgatctc gaagagtgga cccttcgcgc cctggcgcgc ttcagcatca ccgccgaacg
     1081 tcgtaccggg agggtcggcg tctgggtcgc ccggcccgac aagccgcctc tgcccgacgg
     1141 cagcgcgcgc gaggacaaga tcgccgccgt cggcgtgcgc atccgtcact gggtgtcgtt
     1201 ccacggcctc tcgatcaatg tcgagcccga cttgtcgcac tacgcgggaa tcgtgccctg
     1261 cggcatcgcc gaccatggcg tgacgtcgct ggtcgatctc ggcctgacgg tcagcctggc
     1321 cgatctcgat attgcgctgg ccgagacgtt cgacgaggtg ttcggcgcgg ccgtcaggcc
     1381 gtcggaagct gcgtaaagcg atccggcagg ccggtcgcat cggccgattg gacatcgacg
     1441 ttgtcgaccc ggccgtgcga tgggccgcgc cggcaggcgt cgatcattgc cgagacggcc
     1501 gcctcatcgc ccgcgatcag cacctcgacc gatccatcgg tgcgattgcg cacccagccg
     1561 cgcagaccga gggtgcgggc ggtcctgatc gcccagtcgc gatagcctac gccttgaact
     1621 ctgccgacga tgcgcagccg ggccgcctgc atctcgccct caggcgaact cgatgatctt
     1681 ctggtcgacg cgcaaactgt cgccggcttt ggcatgcagc gtcttgaccg tgccgtcgcg
     1741 tgtggcgcgc agcacgttct ccatcttcat cgcctcgacc acggccatca cctcgccggt
     1801 cttgacctcc tggccctcgc tcaccgcgac ggaggcgagc aggccgggca tcggcgacag
     1861 caggaacttg gaggtgtcgg gcgcggcctt gaccggcatc agggcataaa gctcggcctg
     1921 acgcggcgtc agcaccagcg cttccgcctg accgccttca tgggttagcc gccagccaga
     1981 tccgacggta tcgatctgca ccacgacggt ttgccggtcg accttggcgc gcatcaaggg
     2041 ctcgccgggc gaccagccga tctcgatcac gagccgccgg tcgccgacat cgacgtcgaa
     2101 ttccgggccg ttgcccgtca cggtgagcgc gaccggctgg cgattgagca gcacgacgcg
     2161 gctgtcctgc ttgacaccca ggcgcgccgc cttgatccgg tcggcgacgg cggcgatggc
     2221 ggccagcatg gcgggatcgc gcggcggcag atgcgccgcc gtaaagccgc ccttgaactc
     2281 ctcggcgatg aaattggtcg tcagccggcc ctcgcggaac cgcggatgcg ccatcagcgc
     2341 cgccaggaac gacacgttgt gcgacacgcc gcggacatag aactcgtcca gtgcgcggcg
     2401 catgcgctcg atagcgtcga tccggctctt tccataagcg cagagcttgg cgatcatcgg
     2461 atcgtagaac atcgagatct cgccgccctc gtagacgccg gtatcgactc ggacgtccgg
     2521 gccgggcgcg ggttcgcgat acttcaccag ccggccggtc gacggcagga agttgcggaa
     2581 cgggtcctcg gcatagagcc gcgcctcgac cgcccagcca ttcagcttca cgtctttctg
     2641 ctgcaacggc agcttctcgc cggcggcgac gcggatcatc agctcgacga ggtcgaggcc
     2701 ggttacaagc tcggtcaccg gatgctcgac ctgcaggcgg gtgttcatct cgaggaagta
     2761 gaacttgcgg tgcttgtcga cgatgaactc gaccgtgccg gcgctcttgt att
//
LOCUS       DASWGA010000603         9166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1079470, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000603 DASWGA010000000
VERSION     DASWGA010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9166
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1079470"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..4167
                     /gene="rpoC"
                     /locus_tag="VF991_14095"
     CDS             4..4167
                     /gene="rpoC"
                     /locus_tag="VF991_14095"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEX9557623.1"
                     /translation="MNVLGQPQGTPTFDEIRISIASPERIRAWSHGEIKKPETINYRT
                     FKPERDGLFCARIFGPIKDYECLCGKYKRMKFRGITCEKCGVEVTLTKVRRERMGHIE
                     LASPVAHIWFLKSLPSRIGLLLDMTLRDLERILYFENYVVTEPGLTPLKYRELLNEEQ
                     YLNALDEYGDDAFRADIGAEAIRAMLQAIDLNEERPRLREELRETTSEAKRKKLVKRL
                     KLCENFIESGARPEWMILELVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRL
                     KRLIELRAPDIIVRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGR
                     FRQNLLGKRVDYSGRSVIVVGPELKLQQCGLPKKMALELFKPFIYSRLQAYGMANTIK
                     AAKRMVEKERPEVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLV
                     CTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPASGKPIIVPSQDIVLGIY
                     YITLEREGEAGEGSLFSDIGELEHALHKRSLSMHARIKARLEAYDDKGVLANRVVETT
                     PGRILLAQILPKHPSLPFSLINRLLTKKDLQNVIDSVYRHCGQKETVIFADRLMGLGF
                     YHACRAGISFGKDDLVIPASKEKLVAHTQKEVKEYEQQYQDGLITSGEKYNKVVDAWS
                     RCSDRVAEEMMKGISTPKPGKPVNSVWMMAHSGARGSTTQMKQLAGMRGLMTKPSGEI
                     IETPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIIFEE
                     DCGTSRGLTMRAVVDGGDVIEPLSERVLGRTALDDVVDPLNGTVICKSGDLIDEVTVE
                     QIEKAGIEEMRIRSVLTCDTKTGVCGKCYGRDLARGTKVNIGEAVGVIAAQSIGEPGT
                     QLTMRTFHIGGAAQRGAEQSSIEASHDGHVQVRNRNVVVNSAGVPVVMGRNTELVLID
                     GAQRERAKHRVPYGARLLVDNDTRVDKGQKLAEWDPYTLPIITEKAGKAVYVDLVEGV
                     SMREVIDDSTGISNRVVVDWKGQPRGSDLRPRIAIHDAEGKPIVLANGQEARYLLSID
                     SVLSVENGQEVHAGDILARIPREGGKNRDITGGLPRVAELFEARKPKDFAIICDIAGR
                     IEFGKDYKSKRRILIVPEGEGAEPVEYLIPKGKRIAVQEGDFVERGDLLIDGNPVPHD
                     ILRVLGIEKLAEYLVNEIQEVYRLQGVKINDKHIETIARQMLQKVEITDAGDSTFLIG
                     EQIDKQEFDLENVKLVAEKLKPAKADPVLLGITKASLQTKSFISAASFQETTRVLTEA
                     AVSGRVDTLQGLKENVIVGRLIPAGTGGVVNRLKAIAAQRDRAILAAGADGEDEPVPT
                     LEQEHAADD"
     gene            4331..4531
                     /locus_tag="VF991_14100"
     CDS             4331..4531
                     /locus_tag="VF991_14100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEX9557624.1"
                     /translation="MKLSIECERETDGRWIAEIVQIPGAMAYGATRDEAMAEVVALRA
                     IADRIEHGEAKPLDISISLAAA"
     gene            complement(4756..5172)
                     /locus_tag="VF991_14105"
                     /pseudo
     CDS             complement(4756..5172)
                     /locus_tag="VF991_14105"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            5838..6209
                     /gene="rpsL"
                     /locus_tag="VF991_14110"
     CDS             5838..6209
                     /gene="rpsL"
                     /locus_tag="VF991_14110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEX9557625.1"
                     /translation="MPTINQLISKGRRPLIARNKVPALQACPQKRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTNGYEVVSYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGTL
                     DTQGVKDRKQHRSKYGAKRPK"
     gene            6225..6695
                     /gene="rpsG"
                     /locus_tag="VF991_14115"
     CDS             6225..6695
                     /gene="rpsG"
                     /locus_tag="VF991_14115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEX9557626.1"
                     /translation="MSRRRAAEKREVLPDAKFGDIVLSKFMNTLMSRGKKSVAERVVY
                     GALDEIQGKLKQDPVPAFHEALENVKPAVEVRSRRVGGATYQVPVEVRPERRQALAIR
                     WIIQAARDRSGHSMQEKLSAELLDAFNRRGNAVKKREDTHKMADANKAFAHYRW"
     gene            6731..8836
                     /gene="fusA"
                     /locus_tag="VF991_14120"
     CDS             6731..8836
                     /gene="fusA"
                     /locus_tag="VF991_14120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX9557627.1"
                     /translation="MARTTPIAHYRNIGIMAHIDAGKTTTTERILYYTGKSHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWKVETGPNAGPTYRINIIDTPGHVDFTIEVE
                     RSLRVLDGAVCVFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRTGANYWRTVDMI
                     KDRLGSKPLVTQIPIGIEANYKGLVDLVSNKAIIWLEETLGAKYEVVEIPDDLKEQAV
                     EWRHKMVEMAVEQDDVALEKYLAGEQPDYDTLIKCIRKGTISYAFVPVLCGSAFKNKG
                     VQPMLDAVVNYLPAPIDVADVKGVKMGTDEPITLPSNDEAPLSALAFKIMTDPFVGSL
                     TFARVYSGVLESSSGVLNSTKDRKERIGRMLLMHANNREDVKEARAGDIIALAGLKSV
                     TTGDTLCDPDHPVILEKMDFPDPVIELAIEPKSKADQEKMGQALGRLVQEDPTFRVAT
                     DQETGQTVIKGMGELHLEIKVDILRRTYKVDANVGAPQVAYRETLGRRSEIDYTHKKQ
                     TGGSGQFARIKLVFEPGAPGSGYNFESKVVGGTVPKEFIPGVEKGLAASRESGVLAGF
                     PVIDFKATLVDGDYHDVDSSVLAFEIAARAAFREGLAKAQCKLLEPIMKVEVVTPEDY
                     MGDCIGDLNSRRGQILGMDARGNAQVINAMVPLANMFGYVNQLRSMTQGRAAYTMTFD
                     HYAPVPQAVADEVVAKLAG"
     gene            8882..>9166
                     /locus_tag="VF991_14125"
     CDS             8882..>9166
                     /locus_tag="VF991_14125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX9557628.1"
                     /translation="MTKAKFERTKPHCNIGTIGHVDHGKTSLTAAITKILAKTGGATY
                     TAYDQIDKAPEERERGITISTAHVEYETTNRHYAHVDCPGHADYVKNMITG"
BASE COUNT         1798 a         3022 c         2910 g         1436 t
ORIGIN      
        1 ctcatcaacg tgctgggcca gccgcagggc actccgactt tcgacgagat tcgtatctcg
       61 atcgccagcc ccgagcgcat ccgcgcctgg agccacggcg agatcaagaa gccggagacc
      121 atcaactacc gcaccttcaa gccggagcgc gacggcctgt tctgcgcgcg gatttttggt
      181 ccgatcaagg actacgagtg tctgtgcggc aagtacaagc gcatgaagtt ccgcgggatc
      241 acctgcgaga agtgcggtgt cgaagtcacg ctcaccaagg tgcgccgcga gcgcatgggc
      301 cacatcgagc tggcctcgcc ggtggcgcac atctggttcc tgaagtcgct gccctcccgc
      361 atcgggctgc tgctcgacat gaccctgcgc gacctcgagc ggattcttta cttcgagaac
      421 tacgtggtga ccgagcccgg cctgacgccg ctcaagtacc gcgagctcct gaacgaggag
      481 cagtacctca acgccctcga cgagtacggc gacgacgcct tccgcgccga catcggcgcc
      541 gaggcgatcc gcgccatgct gcaggcgatc gacctcaacg aggagcgccc gcggttgcgc
      601 gaggagctgc gcgagaccac ctcggaggcc aagcgcaaga agctggtcaa gcgcctcaag
      661 ctttgcgaga acttcatcga gtccggcgcc cgtccggagt ggatgatcct cgagctggtg
      721 ccggtgatcc cgcccgagct gcgcccgctg gtgccgctcg acggcggccg cttcgccacc
      781 tcggacctca acgatctcta ccgccgcgtc atcaaccgca acaaccggct gaagcgcctg
      841 atcgagctgc gcgcgcccga catcatcgtg cgcaacgaga agcgcatgct gcaggagtcg
      901 gtcgatgcgc tgttcgacaa tggccgccgc ggccgcgtca tcaccggcgc caacaagcgg
      961 ccgctgaagt cgctctccga catgctgaag ggcaagcagg gccggttccg ccagaacctg
     1021 ctcggcaagc gcgtcgacta ctcgggccgc tcggtgatcg tggtcggtcc cgagctcaag
     1081 ctgcagcagt gcggcctgcc caagaagatg gcgcttgagc tgttcaagcc gttcatctac
     1141 tcgcgcctgc aggcctacgg catggccaac accatcaagg ccgccaagcg tatggtcgag
     1201 aaggagcggc cggaggtgtg ggacatcctc gaggaggtga tccgcgagca tccggtgttg
     1261 ctcaaccgcg cgccgacgct gcaccgcctc ggcatccagg ccttcgagcc ggtgctgatc
     1321 gaaggcaagg cgatccagct ccatccgctg gtctgcaccg ccttcaacgc cgacttcgac
     1381 ggcgaccaga tggccgtcca cgtgccgctg tcgctggaag cccagctcga ggcgcgcgtg
     1441 ctcatgatgt cgaccaacaa catcctgagc ccggccagcg gcaagccgat catcgtgccg
     1501 agccaggaca tcgtgctcgg catctactac atcacgctcg agcgcgaagg cgaggcgggc
     1561 gagggctcgt tgttctccga catcggcgag ctcgagcatg ccctgcacaa gcgctcgctc
     1621 tccatgcacg cccgcatcaa ggcgcgcctg gaggcctatg acgacaaggg cgtgctggcc
     1681 aaccgcgtgg tcgagaccac gccgggccgc atcctgctgg cgcagatcct gcccaagcat
     1741 ccgagcctgc cgttctcgct gatcaaccgt cttctgacca agaaggacct gcagaacgtc
     1801 atcgactcgg tctaccgcca ttgcggccag aaggagacgg tgatcttcgc cgaccgcctg
     1861 atgggcctgg gcttctatca cgcctgccgc gccggcattt ccttcggcaa ggacgacctc
     1921 gtcatcccgg cctccaagga gaagctggtc gcccacaccc agaaggaggt caaggagtac
     1981 gagcagcagt accaggacgg cctgatcacc tcgggcgaga agtacaacaa ggtggtcgac
     2041 gcctggtcgc gttgctccga ccgcgtggcc gaggagatga tgaagggcat ttcgacgccc
     2101 aagcccggca agccggtcaa ctcggtgtgg atgatggcgc actccggtgc gcgcggatcg
     2161 accacgcaga tgaagcagct cgccggcatg cgcggtctga tgaccaagcc gtcgggcgag
     2221 atcatcgaga cgccgatcat ctcgaacttc aaggaaggcc tcagcgtgct ggagtacttc
     2281 aactccaccc acggcgcgcg caagggcctg gccgacaccg cgctcaagac cgccaactcg
     2341 ggctacctga cgcggcgcct ggtcgacgtg gcgcaggact gcatcatctt cgaggaggat
     2401 tgcggcacca gccgtggcct cacgatgcgc gcggtcgtcg acggcggcga cgtgatcgag
     2461 cccttgtccg agcgcgtgct cggccgtacc gcgctcgacg acgtcgtcga cccgctcaac
     2521 ggcaccgtca tctgcaagtc gggcgacctg atcgacgagg tcacggtcga gcagatcgaa
     2581 aaggcgggta tcgaggagat gcgcatccgc tcggtgctga cctgcgacac caagaccggc
     2641 gtctgcggca agtgctacgg ccgcgatctg gcgcgcggca ccaaggtcaa catcggcgag
     2701 gcggtgggcg tcatcgccgc ccagtcgatc ggcgagccgg gcacccagct caccatgcgc
     2761 accttccaca tcggcggtgc cgcccagcgc ggcgccgagc agtcgagcat cgaggcgagc
     2821 cacgacggcc acgtccaggt gcgcaaccgc aacgttgtag tcaacagcgc gggcgtgccc
     2881 gtggtgatgg gccgcaacac cgagctggtg ctgatcgacg gcgctcagcg cgagcgcgcc
     2941 aagcatcgcg tgccctacgg cgcgcgcctg ctggtcgaca acgacacgcg ggtcgacaag
     3001 ggccagaagc tcgccgagtg ggatccctac accctgccga tcatcaccga gaaggcaggc
     3061 aaggcagtct atgtcgacct ggtcgagggc gtgtcgatgc gcgaggtgat cgacgattcc
     3121 acgggcattt ccaaccgtgt cgtcgtcgac tggaagggcc agccgcgcgg cagcgacctg
     3181 cgtccgcgca tcgccatcca cgatgccgag ggcaagccga tcgtgttggc caacggccag
     3241 gaggcccgct acctcctgtc gatcgactcg gtgctctcgg tcgagaacgg ccaggaggtc
     3301 catgccggcg acatcctcgc gcgcatcccg cgcgagggcg gcaagaaccg cgacatcacg
     3361 ggcggcctgc cgcgcgtggc cgagctgttc gaggcgcgca agcccaagga tttcgcgatc
     3421 atttgcgaca tcgccggccg catcgagttc ggcaaggact acaagagcaa gcgccgcatc
     3481 ctgatcgtgc cggaaggcga gggtgcggag ccggtcgagt acctgatccc caagggcaag
     3541 cgcatcgcgg tccaggaagg cgacttcgtg gagcgcggcg atctgttgat cgacggcaac
     3601 ccggtgccgc acgacatcct gcgcgtgctc ggcatcgaga agctggccga gtacctggtg
     3661 aacgagatcc aggaggtcta tcgactgcag ggcgtgaaaa tcaacgacaa gcacatcgag
     3721 acgatcgcgc gtcagatgct gcagaaggtc gagatcaccg atgccggcga ttcgaccttc
     3781 ctgatcggcg agcagatcga caagcaggag ttcgacctcg agaacgtcaa gctcgtggct
     3841 gagaagctga agccggccaa ggccgacccg gtgctgctcg gcatcaccaa ggccagcctg
     3901 cagaccaagt cgttcatctc ggcggcgtcc ttccaggaga ccacgcgcgt gctcaccgag
     3961 gcggccgtct cgggccgcgt cgacacgctg caggggctca aggagaacgt catcgtcggc
     4021 cgcctgatcc cggccggcac cggcggggtg gtcaaccggc tgaaggcgat cgccgcccag
     4081 cgcgaccggg ccatcctggc cgccggcgcc gacggcgagg acgagccggt gccgacgctc
     4141 gagcaggaac acgcggccga cgactgacgt cggactgagc caacaaacga aggccgtcac
     4201 cgcaaggtga cggccttttc tttgcctctc accacgcgga aggggcttgt ggacgcgctg
     4261 acaacagatc cggcttttcg aaatccggtc cgcgatctgc tacaatgata ccaactccca
     4321 agggttgagc atgaagctgt cgattgaatg cgaacgtgaa acggatggcc gctggatcgc
     4381 tgagatcgtg cagattcccg gcgcgatggc ctatggcgcg acgcgagacg aagcgatggc
     4441 cgaggtcgtc gcccttcggg ctattgccga ccgtattgaa catggcgagg ccaaacctct
     4501 cgacatctcg atctcgctgg ccgctgcgtg acgaactggc cgtcgacccg ggcacgccgg
     4561 gtcttggccg cgctcctgcg agcaggatgg acaatcaagc cagaccggct cacatcgcgt
     4621 tttgagtcgg cagggctttc ctgacttcgt ttttgcattt cacgatggcg aggaagtagg
     4681 cccaagaatg cttgcccgga ttgccaagca taccggcctg gatccaaacg atctctaacc
     4741 cattcgtcgg gtgcctcatg ccggcctgtg tcgcgccagc caggcctcgc gggtcagcaa
     4801 ccagacaagt cgcgtgccct cgcccgagac gtagcggaaa ggctcgcgat cgaccaaccg
     4861 ggcgccttgc ttttccttga tccggccgga cgcgccattg gcttcggcgt tgctgagcca
     4921 aaggtgcggc cagcccaggt cgcgaaaggc gaattcggtg acccgttcgg cggcctcggt
     4981 catcaggccc tgaccttgca actcagggtc cagccaaaag ccgcgttggt cgcggctgat
     5041 gccatcatcg gaccaaagat caatgcggcc gaccagttcg tccgacacgc ctttcaacgt
     5101 gatcgcccag aatagcttct cgtcgcgagc catctcttcg aggcatcgcg ccacatgtct
     5161 tgctgcgcga tcggcaggat agggtcatgg aatccgagcg ccgagatggc ggacgatttc
     5221 ccatcgcggg aagggcgctg gatgacggac gcattgttct ggcgcagctg gcgcaagacc
     5281 agtagccggg tttcaagcac cggtgtcggg agagggggtt ctcgaagaag taaatcggcg
     5341 cctacgcggt acggaagtat tatgtgattt gaccggtgcc agcctccatt gttggctctt
     5401 cgtttcggac aggccggtgt ttcgcttcca gctttctccg gccttcatgg atacggcggt
     5461 cttcctagta ggccgtacag actatgccta caggatgtag ttgttagatt cttgcgctga
     5521 ccctcgtcgt actgacagga acaagccgcc ggacgaaggc gagaaacacc aacaatatca
     5581 aagaggaaag cgtttcactg tgcttgacgg cgctaccccc gccgccatat aagcgcgcca
     5641 cctcgtcgag gggctggtag taggcgcgag cctagacgca gcctgacgtc gaggaccgct
     5701 acaagtcagg ccatcttggc cgcagagttt tattcgcgcg ggtgctgcgc tcttgccgct
     5761 atgcccgcgt attcgctttg cgccgaggcc ccgacactgg gtggaacccc gagacggcga
     5821 acaggaaccg gaattcgatg ccgaccatca atcagttgat cagcaagggc cgccgcccgc
     5881 tcatcgcgcg caacaaggtg ccggcgctgc aggcttgccc gcagaagcgc ggcgtgtgca
     5941 cgcgcgtcta cacgaccacg cccaagaagc ccaactcggc gctgcgcaag gtcgccaagg
     6001 tgcgcctcac caacggctac gaggtggtga gctacatccc gggcgaaggc cataacctgc
     6061 aggagcactc ggtggtcatg atccgcggcg gtcgcgtcaa ggacctgccc ggcgtgcgct
     6121 accacatcat tcgcggcacc ctcgacaccc agggcgtcaa ggaccgcaaa cagcaccggt
     6181 cgaagtacgg cgccaagcgt cccaagtaag gcggggagga aagcatgtcc cgtcgtcgcg
     6241 ctgccgagaa acgtgaagtc ctgccggacg ccaagttcgg cgatatcgtt ctctcgaagt
     6301 tcatgaacac gctgatgtcg cgtggcaaga agtcggtcgc cgagcgcgtc gtctacggcg
     6361 cactcgacga gatccagggc aagctcaagc aggatccggt gccggccttc cacgaggcgc
     6421 tggagaacgt caagccggcg gtcgaagtcc gctcgcgccg cgtcggcggc gccacctacc
     6481 aggtgccggt tgaggtccgt cccgagcgcc gccaggcgct ggctatccgc tggatcatcc
     6541 aggccgcccg cgatcgctcg ggtcacagca tgcaggagaa gctctcggcc gaactgctcg
     6601 acgccttcaa ccgccgcggc aatgccgtca agaaacgcga agacacccat aagatggccg
     6661 acgccaacaa ggcgtttgcg cattaccgct ggtaagcgct tctcggcccc cctcccagaa
     6721 agccctctcc atggctcgca ccacccccat cgcgcactac cgcaacatcg gtatcatggc
     6781 gcatatcgac gccggcaaga cgacgacgac cgagcgcatc ctctattaca ccggcaagtc
     6841 gcataagatc ggcgaagtcc atgacggcgc cgcgaccatg gactggatgg agcaggagca
     6901 ggagcgcggc atcaccatca cctcggccgc caccaccgcc ttctggaagg tcgaaaccgg
     6961 ccccaacgcg ggcccgacct atcgcatcaa catcatcgac actccgggcc acgtcgactt
     7021 caccatcgag gtcgagcgta gcctgcgcgt gctcgatggc gcggtctgcg tgttcgattc
     7081 agtggccggc gtggagccgc agtccgagac ggtgtggcgc caggccgaca agtacggcgt
     7141 gccgcgcatc tgcttcgtca acaagatgga ccgcaccggc gccaactact ggcgcaccgt
     7201 cgacatgatc aaggatcggc tgggcagcaa gccgctggtc acccagatcc cgatcggcat
     7261 cgaggccaac tacaagggcc tggtcgacct tgtttccaac aaggcgatca tctggctgga
     7321 agagacgctc ggcgccaagt acgaggtcgt cgagattccg gacgacctga aggaacaggc
     7381 cgtcgagtgg cgccacaaga tggtcgagat ggccgtcgag caggacgatg ttgcgctcga
     7441 gaagtacctg gccggcgaac agcccgacta cgacacgctg ataaagtgca tccgcaaggg
     7501 cacgatttcc tacgccttcg ttccggtgct gtgcggctcg gcgttcaaga acaagggcgt
     7561 gcagcccatg ctcgacgccg tcgtcaacta cctgccggcg ccgatcgacg tggccgacgt
     7621 caagggtgtg aagatgggca ccgacgagcc gatcacgctg ccgtcgaacg acgaggcgcc
     7681 gctctcggcg ctcgccttca agatcatgac cgacccgttc gttggctcgc tcaccttcgc
     7741 ccgtgtctat tcgggcgtgc tcgaatcgtc gagcggcgtg ctgaacagca ccaaggaccg
     7801 caaggagcgc atcggccgca tgctgctgat gcacgccaac aaccgcgagg acgtcaagga
     7861 agcgcgcgcc ggcgacatca tcgcgctcgc cgggctgaag agcgtcacca ccggcgacac
     7921 gctgtgcgat cccgaccacc cggtgatcct cgagaagatg gacttccccg atccggtcat
     7981 cgagctcgcc atcgagccca agtcgaaggc tgaccaggag aagatgggcc aggccctcgg
     8041 ccgtctcgtc caggaggacc cgaccttccg cgtcgccacc gaccaggaga ccggacagac
     8101 cgtcatcaag ggcatgggcg agctccatct cgagatcaag gtcgacatcc tgcgccgcac
     8161 ctacaaggtc gacgccaatg tcggcgcccc tcaggtcgcc tatcgcgaga cgttggggcg
     8221 ccggtcggag atcgactaca cccacaagaa gcagaccggc ggctcgggcc agttcgcccg
     8281 catcaagctc gtgttcgagc cgggcgcgcc cggttcgggc tacaacttcg agagcaaggt
     8341 cgtcggcggc acggtgccga aggaattcat ccccggcgtc gagaagggcc tggcggcttc
     8401 gcgcgagtca ggcgtgctgg ccggcttccc ggtgatcgac ttcaaggcga ccctggtcga
     8461 cggcgactat cacgacgtcg attcgagcgt gctggccttc gagatcgccg cccgcgcggc
     8521 cttccgcgaa ggcctcgcca aggcgcagtg caagctcttg gagccgatca tgaaggtcga
     8581 ggtggttacg ccggaagact acatgggcga ctgcatcggc gatttgaaca gccggcgcgg
     8641 ccagatcctc ggcatggatg cgcgcggcaa cgcgcaggtc atcaacgcca tggtgccgct
     8701 cgccaacatg ttcggctacg tgaaccagct gcgctcgatg actcagggac gcgcggccta
     8761 caccatgacc ttcgaccact acgcgcctgt tccgcaggcc gtggcggacg aagtcgtcgc
     8821 caagctggcg ggctaacgca ccgccgatcg aaccacgacc gattgaccag ggacaaagac
     8881 catgacgaag gcgaagtttg agcggaccaa gccgcactgc aacatcggaa cgatcggtca
     8941 cgtcgaccat ggcaagacgt cgctgacggc ggcgatcacc aagatcctgg cgaagaccgg
     9001 cggggcgacc tacacggcgt acgaccagat cgacaaggcg ccggaggagc gcgagcgcgg
     9061 catcacgatc tcgacggcgc atgtcgagta cgagacgacg aaccggcact acgcgcatgt
     9121 cgactgcccg ggccatgccg actacgtcaa gaacatgatc accggg
//
LOCUS       DASWGA010000604         6177 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2346525, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000604 DASWGA010000000
VERSION     DASWGA010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6177
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2346525"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..999)
                     /locus_tag="VF991_14130"
     CDS             complement(46..999)
                     /locus_tag="VF991_14130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX9557629.1"
                     /translation="MNEVPSRWQSPAPIRYPDPDIVVLDPRFQRLVVPIAALERIASG
                     FRFTEGPAYYGDGRYLLFSDIPNDALLRWDEITGAVATLRQPAGYPDGNTRDRQGRLV
                     TCELGSRTLTRTEHDGTVTVLASQFQNTRLTGPNDVVVKSDGSIWFSDNGAGIRGNYL
                     GDRAPKEMPYRVYRLDPASGALTIAIDDMERPNGLCFSPDETLLYVVDTPDGPKTTRV
                     YDIEDGKAVAGRLFFDAMPGFADGIRCDTHGNVWAGFSGGPGHDGVAVFAADGTLIGR
                     ILLPERCANLCFGGRKRSRLFMTASQSVYALYVEAQGVAGG"
     gene            1160..1288
                     /locus_tag="VF991_14135"
     CDS             1160..1288
                     /locus_tag="VF991_14135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557630.1"
                     /translation="MTMPAETDATSPKYLRDKYAIVGVGETTYMRGSGMTTRALAT"
     gene            1292..2416
                     /locus_tag="VF991_14140"
     CDS             1292..2416
                     /locus_tag="VF991_14140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557631.1"
                     /translation="MRNAIEDAGLKPSDVDGMLSYQGVDSTFSTFVAGDLGIRPNFYM
                     DVFGGGSSTEALVGMAMGLIEAGMCRVVVIFRAMNGFSQVRIGGTGARSVAPVSGDML
                     HARAYGWQSAGQMFAPTFMRHMYDYGTRPEQVAHVKAIHSEHASNNPKAFYRERYTVD
                     DVLKSRIICKPLHLLDCCVETDNGTALVVASAERARDCRHPRTLIRGVVGRCSKPRTD
                     MHYQAGPISTVAGRYAREILWPNSGVGPQDIDVTGSYDAFTFTTMLQLEDYGFCKKGE
                     GGSYVSDGTIRLGGRRPNNTSGGHLCEGYTHGLNMVIENVRQLRHDADDSCPVGPDGK
                     RQHTYDYREGGCRQVKKCELTANLGWANPGTGSAMVMRRD"
     gene            2439..2960
                     /locus_tag="VF991_14145"
     CDS             2439..2960
                     /locus_tag="VF991_14145"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX9557632.1"
                     /translation="MGIQATYLGMPLDISDLDVENLAFFKHCAAHDFHLQRCTACRLL
                     RYPPTTACPWCASPKSEWVAVAGRGAVHSYTEVHHAIQPAFKSHTPYLILLVDLDTQK
                     GQPSEHEALRVAGNLALPDGTLAPAEMVRRVGIGTRVRMVFADVTAGLALPQWTIDEG
                     ADQPARPWRYPQE"
     gene            complement(2963..3388)
                     /locus_tag="VF991_14150"
     CDS             complement(2963..3388)
                     /locus_tag="VF991_14150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX9557633.1"
                     /translation="MSFLLDTNVVSEWVKPRPNAGVVAWLAEADEDRIFVSVITLAEL
                     RYGIERLAAGHRRRRLDEWLRHELPLRFEGRVLSIDAAIADAWGKIVARSEAVGRPIG
                     VTDAFIAASAEVHGLTLVTRNASDFEPTLKSIVNPWTEG"
     gene            complement(3385..3642)
                     /locus_tag="VF991_14155"
     CDS             complement(3385..3642)
                     /locus_tag="VF991_14155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEX9557634.1"
                     /translation="MSASDTWTVAEAKAKLSEVIEKARSGGPQTITRNGRTAVVVVAA
                     EEWQRKTRRAGNLAEFFAVSPLRGSAMRTRRRRDRPRKVDL"
     gene            3847..5520
                     /locus_tag="VF991_14160"
     CDS             3847..5520
                     /locus_tag="VF991_14160"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557635.1"
                     /translation="MGYDLVIKNGMVVDGTGAQRYQADVAIADGKVAEIGKVTEGATR
                     TIDAAGLVVAPGFVDPHTHYDAQICWDGAVTPSSWHGVTSVVMGNCGVGIAPCKPATR
                     EIAMRDLVNVEGIPFDVLNQGITWDWETFPQFMDAAAARKPSLNLAFIAPLTPFRHFV
                     MGAASMERAANPEETAKIARLIGEAVDAGALGFSSTTLNQHMGFEGKPLACRNASREE
                     LKAYANQLKKRGKGAIEIALTRQVGVLEQDQCELLDFLLTESGRPVTFIALFDRDDIP
                     EAVRDTLRRAAPMIAKGARPQTSPLPLTREVDMKNPFSFAAFPAWKRVFADTSKEAQK
                     AVYADPAFRNQFRHDLKNPTGFGNWGRIGVYNVRNPALKSVEGKSIAEIAQEQGKDGV
                     DAFLDLVLADNLECELTMASWNTREDRMRELLNNKSILMALGDGGAHVDMLCDAGYPT
                     YLLGTWVREKQAITLEEGVRKLTSDPADLFGLKDRGRLVKGAPADVAIFDPDRIGSTN
                     HGERRYDLPGGAKRIVMPSKGVEYTVVNGAITWEQGRLTEATAGKVLRG"
     gene            complement(5535..>6177)
                     /locus_tag="VF991_14165"
     CDS             complement(5535..>6177)
                     /locus_tag="VF991_14165"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX9557636.1"
                     /translation="GAFGLWAATSVRYRPLLKGAELADSWATDGHKWLNLPFDSGFVF
                     VAHPSAHRAAFAQDASYSVPRAELRNQKDFNPEWSRRARGFPAYAAIRSLGRSGIAAT
                     VERCCAHADRLVSGIGRLPDAEIVARPIINQGLVRFLAADGDHDRATDDVIGRIQTKG
                     VAWFGGATWHGRRVMRISVCNWLTTDDDIARTLASVAEAVAERLCLLRATGEE"
BASE COUNT         1075 a         2061 c         2084 g          957 t
ORIGIN      
        1 ccaacgcgta tcgtacccgc cgggttgatc ggccggttcg ccggttcagc cgccggcgac
       61 gccctgggcc tcgacataga gggcgtagac cgactggctg gcggtcatga acaggcggct
      121 gcgcttgcgg ccgccgaaac agaggttggc gcagcgctcg ggcagcagga tgcggccgat
      181 caaggtgccg tcggcggcga atacggcgac gccgtcgtgg ccggggccgc ccgagaagcc
      241 cgcccacaca ttgccgtgcg tgtcgcagcg gatgccgtcg gcgaagcccg gcatggcgtc
      301 gaagaacagc cggccagcca ccgccttgcc gtcctcgatg tcgtagacgc gcgtggtctt
      361 gggaccgtcg ggcgtgtcga cgacgtagag caacgtctcg tcgggcgaga agcagagccc
      421 gttgggccgt tccatgtcgt cgatcgcgat ggtgagcgcg ccgctggcgg gatcgaggcg
      481 atagacgcgg tagggcatct ccttcggcgc cctgtcgccg agatagttgc cgcggatgcc
      541 cgcgccgttg tcgctgaacc agatcgaacc gtcggacttc accaccacgt cgttgggacc
      601 ggtgaggcgc gtgttctgga actgcgaggc gagcaccgtg accgtgccgt cgtgctcggt
      661 gcgcgtcagc gtgcggctgc cgagctcgca ggtgaccagc cggccctggc gatcgcgcgt
      721 gttgccgtcg gggtagccgg cgggctggcg cagggtggcg acggcgccgg tgatctcgtc
      781 ccagcgcagc agcgcgtcgt tggggatgtc ggagaacaac aggtaccgcc cgtcgccgta
      841 gtacgccggt ccctcggtga agcgaaagcc cgaggcgatg cgctcgagcg cggcaatcgg
      901 caccaccagg cgctggaagc gcggatcgag cacgacgatg tcgggatcgg gatagcggat
      961 cggcgccggc gattgccagc gcgacggaac ttcattcacc ttcggtctcc ttccccaaaa
     1021 gcaggccctt gtttaaaaag gtccggcgca gggaacaccg gggcgcggcg atttgcaaaa
     1081 accgcggtgc ggacctcggc cctcctccgc caaggcttcg gagggcagga taggcccacg
     1141 atagtcaagg aggggcgcca tgacgatgcc ggccgagacc gatgccacga gtccgaaata
     1201 cctgcgcgac aagtacgcca tcgtcggagt cggcgagacg acctacatgc gcggctcggg
     1261 catgacgacg cgcgcgctcg cgacgtgagc ggtgcgcaac gccatcgagg atgccggcct
     1321 gaaaccgtcc gacgtcgacg gcatgctgtc ctaccagggg gtcgattcga cgttctcgac
     1381 cttcgtcgcc ggcgacctcg gcatccggcc caacttctac atggacgtgt tcggcggcgg
     1441 ctcctcgacg gaggcgctgg tcggcatggc gatgggcctg atcgaagccg gcatgtgcag
     1501 ggtggtggtg atcttccgcg ccatgaacgg tttcagccag gtgcgcatcg gcggcaccgg
     1561 cgcgcgctcg gtggcgccgg tgtcgggcga catgctgcac gcccgcgcct atggctggca
     1621 gagcgccggt cagatgtttg cgcccacctt catgcgccac atgtacgact acggcacgcg
     1681 gcccgagcag gtcgcccacg tcaaggcgat ccacagcgag catgcctcga acaatcccaa
     1741 ggccttctac agggagcgct acacggtcga cgacgttctc aagagccgca tcatctgcaa
     1801 gccgttgcac ctgctggact gctgcgtcga gaccgacaac ggcacggcgc tggtggtggc
     1861 cagcgccgag cgggcgcgcg actgccgcca tccgcgcacg ctgatccgcg gcgtcgtcgg
     1921 ccgctgcagc aagccgcgca ccgacatgca ctaccaggcg ggaccgatct cgacggtcgc
     1981 cgggcgctat gcgcgcgaga tcctgtggcc caactcgggg gtcgggccgc aggatatcga
     2041 cgtcaccggc tcgtacgacg ccttcacctt caccacgatg ctgcagctcg aggattacgg
     2101 cttctgcaag aagggcgaag gcggaagcta tgtcagcgac ggcacgatcc gcctcggtgg
     2161 gcggcgaccc aacaacacca gcggcggtca tctgtgcgag ggttatacgc acgggctgaa
     2221 catggtgatc gagaacgtgc gccagctgcg ccacgatgcc gacgattcgt gtccggtggg
     2281 gcccgatggc aagcgccagc acacctacga ctaccgcgag ggcggctgcc gtcaggtcaa
     2341 gaaatgcgag ctgacggcca acctgggctg ggccaacccg ggcaccggct cggccatggt
     2401 gatgcggcgc gactgaactg cgaacaaggg gacgtacgat ggggatccaa gcgacctatc
     2461 tcggcatgcc gctcgacatc agcgatctcg atgtcgagaa cctggcgttc ttcaagcact
     2521 gcgcggcgca cgacttccat ttgcagcgct gcaccgcctg ccgcctttta cgctatccgc
     2581 cgaccacggc ctgcccgtgg tgcgccagcc cgaagtcgga atgggtggcg gtcgcggggc
     2641 gcggcgccgt ccactcctac accgaagtcc atcacgccat tcagccggcc ttcaagagcc
     2701 acacgcccta tctcatcctg ctggtcgacc tcgacaccca gaagggccag ccgagcgagc
     2761 acgaggcctt gcgcgtcgcc ggcaatctcg ccttgccgga cggcacgctg gcgccggcgg
     2821 agatggtgcg ccgggtcggc atcggcacgc gggttcgcat ggtgtttgcc gacgtgacgg
     2881 caggcctggc gctgccgcaa tggaccatcg acgagggcgc cgaccagccc gccaggccgt
     2941 ggcgctatcc gcaggagtga cgtcaaccct ccgtccacgg gttcacgatg gacttcagcg
     3001 tcggctcgaa gtccgaggcg ttgcgcgtga cgagcgtcaa gccgtggacc tcggctgacg
     3061 ccgcaatgaa agcgtcggtg acgccgatcg gccggcctac ggcctcgctc cgggccacga
     3121 tctttcccca agcgtcggcg atcgcggcgt cgatcgacag gacgcgccct tcgaagcgga
     3181 gcggcagctc gtgccgcaac cactcgtcaa gccgtctccg gcgatggccg gccgccaggc
     3241 gttcgatgcc gtagcgcagc tctgcaaggg tgatgacgct gacgaagatg cgatcctcgt
     3301 cagcctccgc cagccaggcg accacgccgg cattgggacg cggtttcacc cattccgaca
     3361 ccacgttggt gtcgaggaga aagctcacaa atcgaccttg cgcggacggt ccctgcggcg
     3421 cctggtccgc atcgccgatc cccgcagcgg cgagacggcg aagaattccg ccagattgcc
     3481 ggcgcgcctg gtcttgcgct gccattcctc ggcggcgacg acgaccacgg cggtgcgccc
     3541 gttccgagtg atggtttgcg gtccacccga gcgcgctttc tcgatgactt cgctcaactt
     3601 cgccttggcc tcggcgacgg tccaggtatc gctggcgctc atggtccacg cctcctcaaa
     3661 aggtcaggat agtcataata gtcatttact cgggagcgac aagcgcgccc gttgccgaga
     3721 acggtgtcga tatcctgcag cggcgcgtgt gacgacaggt ctctggctct tggctcgccc
     3781 gtgtttttcg catgcgacgg gccagccaag gcggagtacc ctgagccaaa ttcccgggag
     3841 aaatcgatgg gttacgatct cgtcatcaag aacggcatgg tggtcgacgg cacgggtgct
     3901 cagcgctacc aggccgatgt cgcgatcgcc gacggcaagg tggccgagat cggcaaggtg
     3961 acggagggcg ccacacgcac catcgatgcc gcggggctgg tggtggcgcc gggcttcgtc
     4021 gatccgcaca cccactacga tgcgcagatc tgctgggacg gcgcggtcac gccctcgtcg
     4081 tggcacggcg taaccagcgt ggtgatgggt aattgcggcg tcggcatcgc accctgcaag
     4141 cccgcgacac gcgagatcgc catgcgcgat ctggtgaacg tcgaaggcat tccgttcgac
     4201 gtgctgaacc agggcatcac ctgggactgg gagacgttcc cgcaattcat ggacgccgcc
     4261 gcggcgcgca agccgtcgct caacctcgcc ttcatcgcgc cgctgacgcc gttccgccac
     4321 ttcgtcatgg gcgcggcctc gatggaacgg gcggccaacc cggaagaaac ggcgaagatc
     4381 gcccggctga tcggcgaggc ggtcgacgcc ggcgcgctgg gtttctcctc gacgacgctc
     4441 aaccagcata tgggcttcga gggcaagccg ctggcctgcc gcaatgccag ccgcgaggag
     4501 ctgaaggcct acgccaacca gctcaagaag cgcggcaagg gcgcgatcga aatcgcgctg
     4561 acccgccagg tcggcgtgct cgagcaggac cagtgcgagc tgctggattt tctgctgacc
     4621 gagagcggcc ggccggtgac cttcatcgcc ctgttcgatc gcgacgacat tcccgaggcg
     4681 gtgcgcgaca cgctgcgccg tgccgccccc atgatcgcca agggagcgcg gccgcagact
     4741 tcgccgctgc cgctgacccg cgaagtcgac atgaaaaatc ccttctcctt cgccgccttc
     4801 ccggcctgga agcgggtatt cgcggacacc tcgaaggaag cgcagaaggc cgtctatgcc
     4861 gatcccgcct tccgtaacca gttccgtcac gacctcaaaa atccgacggg cttcggcaac
     4921 tggggccgca ttggcgtcta caacgtgcgc aatcctgccc tgaagtcggt ggaaggcaag
     4981 tcgatcgccg agatcgccca ggagcagggc aaggacggcg tcgacgcctt cctcgacctg
     5041 gtgctggccg acaatctcga atgcgagctc accatggcct cgtggaacac gcgcgaggac
     5101 cgcatgcgcg agcttttaaa caacaagtcg atcctgatgg cgctgggcga cggcggagcc
     5161 cacgtcgaca tgctgtgcga cgccggttac ccgacctacc tgctgggcac ctgggtacgc
     5221 gagaagcagg cgatcaccct cgaagagggc gtgcgcaagc tcacctccga tcccgccgac
     5281 ctgttcggcc taaaagatcg cggccgcctc gttaagggcg cgccggccga cgtggcgatc
     5341 ttcgatcccg accgcatcgg ctcgaccaac cacggcgagc gccgctacga tcttccgggc
     5401 ggcgccaagc gcatcgtgat gccgtcgaag ggcgtcgaat acacggtggt caacggcgcg
     5461 atcacctggg agcagggccg cctcaccgag gccacggcgg gcaaggtgct gcggggatag
     5521 accgctcctg aatctcattc ctcgcccgtc gcacggagga ggcacaaccg ttctgcaacg
     5581 gcttcggcaa cgctcgcgag cgtgcgggcg atgtcgtcat cggtcgtcag ccagttgcac
     5641 accgagatcc gcatgactcg cctgccgtgc caggtggcgc cgccgaacca ggcgacgccc
     5701 ttggtctgga tgcgaccgat cacatcatcg gtggcgcgat catggtcgcc gtcggcggcg
     5761 aggaagcgga ccaagccctg attgatgatc ggcctggcga cgatctcggc gtcgggcagc
     5821 cggccgatac cgctcaccag ccggtcggca tgggcgcagc aacgctcgac cgttgcggca
     5881 atgcccgacc gtccgagcga acggatggcg gcataggccg ggaagccgcg cgcccggcgc
     5941 gaccattcag gattgaaatc cttctggttg cgcagctccg cacgcgggac ggaatagctc
     6001 gcatcctgag cgaaggcggc gcgatgcgcc gagggatgcg ccacgaacac gaagcccgag
     6061 tcgaacggca ggttcagcca tttgtgtcca tccgtggccc aggagtcggc cagctccgcg
     6121 cccttgagca gagggcggta gcggacgctg gtcgccgccc acaggccgaa ggcgcca
//
LOCUS       DASWGA010000605         2423 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2094746, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000605 DASWGA010000000
VERSION     DASWGA010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2094746"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..746
                     /locus_tag="VF991_14170"
     CDS             <1..746
                     /locus_tag="VF991_14170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008192857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEX9557637.1"
                     /translation="TAYMAAHNVSGEDLKKAIGHVSWKSHQNGAKNPKAHLQKAVEMD
                     TILNAPMIASPLGLFDCCGVSDGAAAAIVTTPEIAKSLGKHNLVSVKALQLSVSNGSE
                     SGHNSWDGSYFHTTRIASKKAYEEAGIKNPRDEVSMFEVHDCFSVTELVTMEDLHISE
                     TGKGWKDVLDGFYDADGKIPCQIDGGLKCFGHPIGASGLLMLYEMYLQFQGRAGARQL
                     KDPRIGMTHNLGGAPRENVSSVAIVGRYE"
     gene            944..1417
                     /locus_tag="VF991_14175"
     CDS             944..1417
                     /locus_tag="VF991_14175"
                     /inference="COORDINATES: protein motif:HMM:NF024844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9557638.1"
                     /translation="MKHTMQLDKKVIGHEFEAFSTTVEAGKVKLFCKAIGEEDPIYVD
                     EAAAKKAGYRAVPVPPTFLQAITNDDPGKGGLLRLLNVDIGLILHGEQHYDYYAPVFV
                     GDRITCQQKVTDMYDKKGGALWFVVSETSMKDQSGKLVAKGTGITVVRNPDAGKK"
     gene            1429..1863
                     /locus_tag="VF991_14180"
     CDS             1429..1863
                     /locus_tag="VF991_14180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX9557639.1"
                     /translation="MVAAPPKAPIFDQVKVGDPIKPIVLPPISRHQLALYCGGSGDHN
                     PIHVDLDFAKKFGFKDVFAHGMLSMGFLGRLVTSYAPRDRIRRLGTRFTSITWPGDVI
                     TLSGKVTGKREENGEKLIDLEVKCTNQNGQDTLQGHATVAAN"
     gene            1984..2409
                     /locus_tag="VF991_14185"
     CDS             1984..2409
                     /locus_tag="VF991_14185"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9557640.1"
                     /translation="MGQMDGKVAIVTGSGRGIGREIALRLVRDGARVVINDIDEAPAK
                     ETIATIEKMGGKAVACTGDVAKPDFGDRIVKTAVDAFGGCHVVVNNAGYTWDSVIQKM
                     SDEQWYAILDVHLTAPSRRPGGSAAGRSGRRASASCARW"
BASE COUNT          487 a          790 c          765 g          381 t
ORIGIN      
        1 ccaccgccta catggccgcc cacaacgtca gcggcgagga cctcaagaag gcgatcggcc
       61 acgtctcgtg gaagagccat cagaacggcg ccaagaatcc caaggcgcat ctgcagaagg
      121 ccgtcgagat ggacaccatc ctgaacgcgc cgatgatcgc ctcgccgctg ggtctgttcg
      181 attgctgcgg cgtgtcggac ggcgcggccg cggcgatcgt caccacgccc gagatcgcca
      241 agtcgctcgg caagcacaac ctcgtcagcg tcaaggcatt gcagctctcg gtctccaacg
      301 gctccgaatc gggccacaat tcgtgggacg gcagctactt ccacaccacg cgcatcgcct
      361 cgaagaaggc ctacgaagaa gccggcatca agaacccgcg cgacgaagtc tcgatgttcg
      421 aggtgcacga ctgcttctcg gtcaccgagc tcgtgaccat ggaagacctg cacatctccg
      481 agaccggcaa gggctggaag gacgttttgg acggcttcta cgacgccgac ggcaagatcc
      541 cctgccagat cgacggcggc ctgaagtgct tcggccatcc gatcggcgcc tcgggcctgc
      601 tcatgctcta cgagatgtat ctgcagttcc agggccgcgc cggcgcccgc cagctgaaag
      661 atccgcgcat cggcatgacc cacaacctcg gcggcgcgcc gcgcgagaac gtgtccagcg
      721 tcgccatcgt cggccgctac gagtaacgcg cacttctcgt tagcttatct cttcactcgt
      781 cccttcatgt tcctccctct catgctcctc tccccctttg ggggagaggc tgggtgaggg
      841 ggtgccacgc gaccgtcgct tgaaccccct cacctaacct ctcccccaag ggggagagga
      901 acatgaaggt gaaagggcgg gtgggacacg ccacaacacg ggagtgaaac acactatgca
      961 gctcgacaag aaggtgatcg gccacgagtt cgaggcgttt agcaccaccg tcgaagccgg
     1021 caaggtgaag ctgttctgca aggccatcgg cgaggaagac ccgatctacg tcgacgaggc
     1081 cgccgccaag aaagcgggct atcgcgccgt gccggtgccg ccgacgttcc tgcaggcgat
     1141 caccaacgac gatccgggca agggcggcct gctgcgcctg ctcaacgtcg atatcggcct
     1201 gatcctgcac ggcgagcagc actacgacta ctacgcgccg gtctttgtcg gcgacaggat
     1261 cacctgccag cagaaggtga ccgacatgta cgacaagaag ggcggtgccc tgtggttcgt
     1321 ggtctccgag acctcgatga aggaccagtc gggcaagctc gtggccaagg gcacgggcat
     1381 caccgtcgtg cgcaatcccg atgccggcaa gaagtgaggg aggaagaaat ggttgcagct
     1441 cccccgaagg cgccgatctt cgaccaggtc aaggtgggcg atccgatcaa gccgatcgtc
     1501 ctgccgccga tctcgcgcca ccagctcgcg ctctattgcg gcggctcggg cgaccacaat
     1561 ccgatccatg tcgatctcga cttcgccaag aagttcggct tcaaggacgt ctttgcccac
     1621 ggcatgctgt cgatgggctt tttaggccgg ctggtcacca gctatgcgcc gcgcgatcgc
     1681 atccgccggc tgggcacgcg cttcacctcg atcacctggc cgggcgacgt catcaccttg
     1741 agcggcaagg tcaccggcaa gcgcgaggag aacggcgaga agctcataga cctcgaggtc
     1801 aagtgcacca accagaacgg ccaggacacg ctgcaaggcc acgccacggt cgcggccaac
     1861 taatcatcgc tgggagcgcg ccactccgtg gcgctcatgg gttgtgtgat ccacgaagat
     1921 gcgccactca ggcgcatgtg aatgcgccgc agtggcgcgc tcccagcaaa gaaggagaac
     1981 gacatgggtc agatggacgg caaggtggcg atcgtcaccg gttcgggccg cggtatcggc
     2041 cgcgagatcg cgctgcgcct ggtgcgcgac ggcgcgcggg tggtgatcaa cgacatcgac
     2101 gaggcgccgg ccaaggagac catcgccacg atcgagaaga tgggcggcaa ggcggtggcc
     2161 tgcaccggcg acgtcgccaa gcccgacttc ggcgaccgca tcgtcaagac cgcggtcgac
     2221 gccttcggcg gctgccatgt cgtggtcaac aacgccggct acacctggga ctcggtgatc
     2281 cagaagatga gcgacgagca gtggtacgcc atcctcgacg tccacctgac cgctccttct
     2341 cgacggcctg gcggaagtgc tgctggaagg agcggtcgga gggcaagcgc atcgtgcgca
     2401 aggtggtgaa catctcctcg acc
//
LOCUS       DASWGA010000606         2311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_703318, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000606 DASWGA010000000
VERSION     DASWGA010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_703318"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..583
                     /locus_tag="VF991_14190"
     CDS             <1..583
                     /locus_tag="VF991_14190"
                     /inference="COORDINATES: protein motif:HMM:NF023580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3592 domain-containing protein"
                     /protein_id="HEX9557641.1"
                     /translation="ERDIPAGVRKGLAILAAFGVVVAVGVYYLVTSGPRLLSAYLPDG
                     NDNAPLVIAIACFGLLVLLFSIASYRSSRKAADWPMVRGTVLSSGSERIQKRESGRTQ
                     TYYVPAVEYGYRVHDVDYVSRQIKLGVVLSADPAYAAKVAARYPQGSGVDVHYDPANP
                     SNAALENPRGVHWLLLAVALGCFAVAAHAAGII"
     gene            complement(576..860)
                     /locus_tag="VF991_14195"
     CDS             complement(576..860)
                     /locus_tag="VF991_14195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557642.1"
                     /translation="MTVAVPPRPITATVEPGSTLAVRNTAPTLVVTAQPIRAARSSGM
                     SSRIFTTACSCASMWSAKDDSASGAGIGTPFRLMRCGRSVGRRVASFGFK"
     gene            939..1109
                     /locus_tag="VF991_14200"
     CDS             939..1109
                     /locus_tag="VF991_14200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557643.1"
                     /translation="MGSNRFRTDMPRFIDFYMRSLLKLDLVISGRVRLDQMNEAYAEL
                     KTGQVARNVIAF"
     gene            1569..1724
                     /locus_tag="VF991_14205"
     CDS             1569..1724
                     /locus_tag="VF991_14205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557644.1"
                     /translation="MKAAKAAIEADGYKGVSLLGKGTDGAWRAKAYRGTTEVQLMVDG
                     TGKVSAE"
     gene            complement(1774..>2311)
                     /locus_tag="VF991_14210"
     CDS             complement(1774..>2311)
                     /locus_tag="VF991_14210"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9557645.1"
                     /translation="ETDERLRSLALSHAYHHSPLALIVRSGQAHDFLDRAEIAAMPNL
                     KLAVSDGPVLMPMVQLLFPKASVTVLRGGNVLAALSSGQVDGVAWPLQQAGPWAAAHP
                     GFTAVVPANTTGPILFTYLVPPGAEIFRRYINEWLELKAADGFRAAQLDYWMNGKPRS
                     DRPPRWNLVDAVIGVVRR"
BASE COUNT          379 a          782 c          768 g          382 t
ORIGIN      
        1 cgagcgcgac attcccgccg gcgtgcgcaa gggactggcc atcctggccg cgttcggcgt
       61 cgtggttgcg gtcggcgtgt actacctcgt gaccagcggc ccgcgtctgt tgtccgccta
      121 tctacccgac ggcaatgaca atgcgccgtt ggtgatcgcc atcgcctgct tcggcttgct
      181 ggtgctgctg ttctccatcg ccagctatcg ttcgtcgcgc aaggcggccg actggcccat
      241 ggtgcgcggt accgtgctga gcagcggctc ggagcggatc cagaagcgcg agagcggccg
      301 cacccaaacc tactacgtcc ctgccgtcga atatggctat cgcgtccacg acgtcgacta
      361 tgtcagccgg cagatcaagc tcggcgtcgt cctttccgcc gatccggcct atgccgcgaa
      421 ggtcgcggcg cgctatccgc agggcagcgg ggtcgatgtc cactatgatc ccgccaatcc
      481 gagcaacgcg gcgctcgaga acccgcgcgg cgtccattgg ttgttgctcg ccgtggcgct
      541 gggttgcttc gcggtcgccg cccatgcggc cggcatcatt tgaagccgaa cgaggcgacg
      601 cggcggccaa ccgaccgacc gcagcgcatg agcctgaatg gcgtgccgat gccggccccg
      661 gaggcgctgt cgtcctttgc cgaccacatg ctggcgcacg agcacgccgt ggtgaaaatc
      721 cgcgaggaca tgccgctcga tcgcgccgcc ctgatcggct gcgccgtcac gacgagcgtc
      781 ggcgcggtgt tccgcacggc caaggtggaa ccgggctcga ccgtcgcggt gatcggcctc
      841 ggcggcaccg cgacggtcat cggcatgatg ccgaccgaca tgcctttcga gctgtcgggg
      901 ccgagatcct cggcgaaaag cgcatccagg gatgtgccat gggttccaac cgtttccgca
      961 ccgacatgcc gcgcttcatc gacttctaca tgcgcagcct gctcaagctc gatcttgtga
     1021 tctccggccg cgtccgcctc gaccagatga acgaggccta cgccgaactc aagacaggtc
     1081 aggtcgcccg caacgtgatc gcgttctgac gaccatcccg acgccgcggg ccggcgcttt
     1141 gacgccggca aatcgacgat agcggcacaa atgctcccag gtgtgcggag agtcacagtc
     1201 accggcgcgc aggctggcta cgtcagcacg tagaagcggg ccgggcagca tcgtgccggg
     1261 cccgcccatc gtccttcgtt ggagatggag aaatgtcgaa aaatttcctg accttgatcg
     1321 ttctggtcgc tcttgttggg acattcgcca acgctccggt gccggagccg gtgtcccgat
     1381 ccattgcgtc acgagcgaca ccatccggtc ctgcggtcgc ttctcccgcc gtcgcggatt
     1441 cgcacgcttt ggcaggacat cagccgccca tccccctcgt gcgaaacgct ccggcgttgc
     1501 cgacgacggc gacctctccc gacgttccgg cgcctggtgc ggaaatgcag gcccaggacg
     1561 atttggactt gaaagcggcc aaggcggcga tcgaagcgga cggatacaag ggcgtgagcc
     1621 tgctgggcaa gggcaccgat ggcgcctggc gcgccaaggc ctataggggc acgaccgaag
     1681 tccagctcat ggtggacggc acgggcaagg tatctgcgga gtgactacgc gaggccggtg
     1741 tccagtcgcc ccggccgcat ggcgacagcg cttctaccgg cgcacgacgc cgatcacggc
     1801 atcgacaaga ttccagcgcg gcggccggtc ggaccgcggt tttccgttca tccagtagtc
     1861 gagctgcgcc gcgcgaaagc cgtcggcggc cttgagctcc agccactcgt tgatatagcg
     1921 ccggaaaatc tcggcgccgg gcggcaccag ataggtgaac aggatcgggc ccgtcgtgtt
     1981 ggccggcacg acggcggtga agccgggatg cgccgcggcc cacgggcccg cctgctgcag
     2041 cggccaggcc acgccgtcga cctggccgct gctcagcgcg gccagcacgt tcccgccgcg
     2101 cagcaccgtg acgctggcct tgggaaagag tagctgcacc atcggcatca ggaccggacc
     2161 gtcgctgacc gcgagcttga ggttgggcat cgcggcgatc tcggcgcggt cgagaaagtc
     2221 atgcgcctgc cccgagcgca cgatcagggc gagcggactg tgatggtagg cgtgcgaaag
     2281 cgccagcgac cgcagccgct cgtcggtttc g
//
LOCUS       DASWGA010000607         5255 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2474175, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000607 DASWGA010000000
VERSION     DASWGA010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5255
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2474175"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /gene="phaZ"
                     /locus_tag="VF991_14215"
     CDS             <1..926
                     /gene="phaZ"
                     /locus_tag="VF991_14215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HEX9557646.1"
                     /translation="PQPRVLLVAPLSGHFATLLRDTVRVLLPEHDVHVTDWANARDVG
                     IWHGRFGFDEYVEHLIKFLEAMGPGAHVIAVCQPCVQALAAAAVMAEDDNPNQPRSLT
                     LMAGPIDTRINPTKVNELATGQPIGWFERNLIARVPWRYPGATRRVYPGFLQLTAFMS
                     MNAERHMKAQFDLYQAMAKGQHAEAATIKAFYDEYFAVLDMTAEFYLETVQWVFQDHL
                     LAKGRLDYRDRRVHPKAIRRTALFTIEGERDDICAIGQTVAAHDLCTSLRPYRKKHYM
                     QAGVGHYGVFSGRRWASQIYPLVRNTILANE"
     gene            1025..3181
                     /gene="scpA"
                     /locus_tag="VF991_14220"
     CDS             1025..3181
                     /gene="scpA"
                     /locus_tag="VF991_14220"
                     /EC_number="5.4.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004494 - methylmalonyl-CoA mutase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
                     /protein_id="HEX9557647.1"
                     /translation="MADFPKKTLADWEKLAAKELRDKSLSSLDWMTPEGILVKPLYTA
                     ADLETLETVGSLPGFPPFTRGPKATMYAGRPWTVRQYAGFSTAEESNKFYRANLAAGQ
                     MGLSVAFDLATHRGYDSDHPRVVGDVGKAGVAIDSVEDMKILFDGIPLDKMSVSMTMN
                     GAVLPVLAGYIVAAEEQGVPQDKLSGTIQNDILKEFMVRNTYIYPPGPSMRIVADIIE
                     HTAHHMPKFNSISISGYHMQEAGATLVQELAFTLADGLEYVRAARAKGLDIDAFAPRL
                     SFFFCIGMNFFMEVAKLRAARFLWAELIKPFEPKKVDSLSLRTHCQTSGVSLTEQDPY
                     NNVIRTAYEAMAAVLGGTQSLHTNSFDEAIALPTPASSRIARNTQLILQHETGITKVV
                     DPLAGSYYVEALTASMIAEARKLIAEVEALGGMTKAVEAGMPKLRIEEASARRQARID
                     RGEEVIVGVNKFQAKDATTVEVLDIDNDIVRESQVARLAKIRKSRDEAKCVAALKALG
                     EAARNGTGNLLALAIEATRARATVGEISSALEGVYGRYQATIRSISGVYAGEWEGDGG
                     LERIRTDIDSFAEEEGRRPRLMVVKMGQDGHDRGAKVIATAFADLGFDVDIGPLFQTP
                     QEAARAAIENDVHVIGVSSQAAGHKTLVPQLIEELAKQGGSDVLVVVGGVIPAQDYDF
                     LKKAGVAAIYGPGTNIPAAAAEILAILRQRSHKRAA"
     gene            complement(3198..4022)
                     /locus_tag="VF991_14225"
     CDS             complement(3198..4022)
                     /locus_tag="VF991_14225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557648.1"
                     /translation="MTFRRAFIAFAACLAAPAAALGQQARQVDIGYEITFAGITGFRI
                     DVTARFNGASYDVESSTFKEGVLKAVTMNYFGRNRAWGGFSTQGARPSAGSLSIMVGD
                     KPRTWLAQYGAGGFLQETHTPAWKPTPQQTISDADRQGSLDPLSAALTVGLAGDAACD
                     KPVRTNDGKRRIDVLFRKIGMEPAAASGIPGAQGDVLVCEIYTKRVAGEFDEAPKEAE
                     TERERPIRIWLARFDQTQIRYPGKLEAQTTFATIRGRILYFRERALTQEESQAMRK"
     gene            4272..>5255
                     /locus_tag="VF991_14230"
     CDS             4272..>5255
                     /locus_tag="VF991_14230"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEX9557649.1"
                     /translation="MLLVLAKVVNVYVPILYKHAVDALGGTAAQAVAVPVALIVAYGV
                     ARVLAQAVGEIRDAIFSPVSQRAIRNLALEVFGHLHALSLRFHLERQTGGLSRVIERG
                     TTGIEFLIRFTTFNILPTLLEITLVGAILWSLYDWRFSAVTLFAIAGYVLFSVTLSEW
                     RIKFVRRMNEADTEANAKAIDSLLNYETVKYFGNEAHEARRFDVGRRRYETAAIRSSR
                     TLSLLNVGQGALISAGLVAVMIMAGYGVADGTMTLGDFVAVNAFLIQLYQPLNMLGFA
                     YREIRNALVNMEQMFGLLEVPAEIADKPGAPALAVSGGEIVFDHVDFHYEKD"
BASE COUNT          895 a         1763 c         1698 g          899 t
ORIGIN      
        1 ggccgcagcc cagggtgttg ctggtggcgc cgctgtccgg ccatttcgcc accctgctac
       61 gcgacacggt gcgcgtgctc ttgcccgagc acgacgtgca cgtcaccgac tgggccaatg
      121 cgcgcgatgt cggcatctgg catggccgtt tcggtttcga cgaatatgtc gagcacctga
      181 tcaagttcct cgaggcgatg gggccgggcg cgcacgtgat cgccgtctgc caaccctgcg
      241 tgcaggcgct ggcggcggcg gccgtgatgg cggaggacga caatcccaac cagccgcgca
      301 gcctcaccct gatggcaggg ccgatcgaca cgcggatcaa cccgaccaag gtgaacgagc
      361 tcgcgacagg gcagccgatc ggctggttcg agcgcaacct gatcgcccgc gtgccatggc
      421 gctatcccgg ggcgacgcga cgcgtctatc ccggcttcct gcagctcacc gccttcatga
      481 gcatgaatgc cgagcggcac atgaaggcgc agttcgatct ctaccaggcg atggccaagg
      541 gccagcacgc cgaggcggcc accatcaagg cgttctacga cgaatatttc gccgtcttgg
      601 acatgacggc ggagttctat ctcgagactg tacagtgggt gttccaggac catctgctgg
      661 ccaagggccg gctcgactat cgcgatcgcc gcgtccatcc caaggcgatc cgccgcaccg
      721 cgctgttcac catcgaaggc gagcgcgacg acatctgcgc gatcggccag accgtggccg
      781 cgcacgatct ctgcaccagc ctgagaccgt atcgcaagaa gcactatatg caggccggcg
      841 tcggccatta cggcgtgttc agcggccggc ggtgggccag ccagatctat cccttggtgc
      901 gaaacacgat cctggccaac gaatagcgac taaaattaga ttgtcatccc gagcgcagcg
      961 agggaccttt ccgatccaca aagatccctc gctttcgctc gggatgacac ctaagtattt
     1021 gaccatggct gactttccga agaagaccct ggccgactgg gaaaagcttg ccgccaagga
     1081 gctgcgcgac aagtccctgt cgtcgctcga ctggatgacg ccggaaggca ttttagtgaa
     1141 gccgctctac accgcggccg acctcgagac tctcgagacg gtgggctcgc tgccgggctt
     1201 cccgccgttc acgcgcgggc cgaaggccac catgtatgcc ggccggccct ggacggtccg
     1261 ccagtacgcc ggcttctcga ccgccgagga gagcaacaag ttctatcgcg ccaatctcgc
     1321 cgccggccag atgggcctgt cagtggcgtt cgatcttgcc acccatcgcg gctacgactc
     1381 cgaccatccg cgcgtggtgg gcgacgtcgg caaggcgggc gtggcgatcg attcggtcga
     1441 ggacatgaag atcctgttcg acggtatccc gctcgacaag atgagcgtgt cgatgaccat
     1501 gaacggcgcc gtgctgccgg tgctggcggg ctacatcgtg gcggccgaag agcagggcgt
     1561 gccgcaggac aagctctcgg gcacgatcca gaacgacatc ttaaaagagt tcatggtccg
     1621 caacacctac atctacccgc ccggaccgtc gatgcgcatc gtggccgaca tcatcgagca
     1681 caccgcgcac cacatgccca agttcaactc gatctcgatc tccggctatc acatgcagga
     1741 agcgggcgcg acgctggtgc aggaactcgc cttcacgctg gccgacggac tcgaatacgt
     1801 gcgtgccgcg cgcgccaagg ggctcgacat cgacgccttc gcgccgcgcc tctccttctt
     1861 cttctgcatc ggcatgaact tcttcatgga agtggccaag ctgcgcgccg cgcgcttcct
     1921 gtgggccgag ctgataaaac cgttcgagcc caagaaggtc gattcgctgt cgctgcgcac
     1981 ccattgccag acctcgggcg tgtcgctgac cgagcaggac ccctacaaca acgtgatccg
     2041 caccgcctac gaggcgatgg cggcggtgct gggtggcacg cagtcgctgc acaccaattc
     2101 cttcgacgag gcgatcgcgc tgccgacacc cgcctcctcg cgcatcgcgc gcaacacgca
     2161 gctgatcctg cagcacgaga ccgggatcac caaggtcgtc gatccgctgg ccggcagcta
     2221 ttacgtcgag gcgctgaccg ccagcatgat cgccgaagca cgcaagctga tcgccgaggt
     2281 cgaggcgctg ggcggcatga ccaaggcggt cgaggccggc atgcccaagc tgcgtatcga
     2341 agaggcctcg gcgcgccgcc aggcccgcat cgaccgcggc gaggaagtga tcgtgggcgt
     2401 caacaagttc caggccaagg acgcaacgac cgtcgaggtt ttggacatcg acaacgacat
     2461 cgtgcgcgaa tcgcaggtcg cgcggctggc caagatccgc aagagccgcg acgaggccaa
     2521 gtgcgtggcg gcgctgaagg cgctgggcga ggccgcgcgc aacggcaccg gcaatctttt
     2581 agcgcttgcc atcgaggcga cgcgcgcgcg tgcgaccgtg ggcgagatct cctcggcgct
     2641 cgagggcgtc tatggccgct accaggccac catccgctcg atctccggcg tctatgccgg
     2701 cgagtgggag ggcgatggcg gcctcgagcg catccgcacc gacatcgact cgttcgccga
     2761 ggaggaaggt cgccggccgc gcctcatggt cgtgaaaatg ggccaggacg gccacgaccg
     2821 cggcgccaag gtgatcgcca cggcttttgc cgatctgggc ttcgacgtcg atatcggccc
     2881 gctgttccag acgccgcagg aggccgcgcg cgcggcgatc gagaatgacg tgcacgtgat
     2941 cggcgtgtcg agccaggcgg ccgggcacaa gaccttggtg ccgcagctga tcgaagagct
     3001 tgccaagcaa ggcggctctg atgtgctggt ggtggtgggc ggcgtcattc ccgcccagga
     3061 ctacgacttc ctgaagaagg ccggggtggc cgcgatctac ggacccggca ccaacatccc
     3121 ggcggcggcg gccgagatcc tcgccatcct gcgccagcgc agccacaagc gcgcggctta
     3181 gttgtcagga cgacacgtca ctttcgcatc gcctggcttt cctcttgcgt cagcgcacgc
     3241 tcgcgaaagt acaggatcct gccgcgaatc gtggcgaatg tggtctgggc ttcgagcttg
     3301 ccgggatagc ggatctgggt ctggtcgaac cgcgcgagcc agatcctgat cggccgttcg
     3361 cgctccgtct cggcttcctt gggcgcctcg tcgaattcgc cggcgacgcg cttggtgtag
     3421 atctcgcaga ccagcacgtc gccttgcgcg ccggggatgc cgctcgccgc ggcgggctcc
     3481 atgccgatct tgcggaacag cacgtcgatg cgccgcttgc cgtcgttggt ccgcaccggc
     3541 ttgtcgcagg cggcgtcgcc ggcgaggccg accgtgagcg ccgctgacaa tgggtcgagc
     3601 gacccttgcc ggtcggcatc ggagatcgtc tgctgcggcg tcggcttcca cgccggggtg
     3661 tgggtttcct gcaggaagcc gccggcgccg tattgcgcca gccaggtccg cggcttgtcg
     3721 cccaccatga tcgacagcga tcccgcgctg ggccgcgcgc cctgggtcga gaagccgccc
     3781 caggcacggt tgcggccgaa gtagttcatg gtgacggcct tcagcacgcc ttccttgaag
     3841 gtgctgctct cgacgtcgta gctcgcgccg ttgaagcggg cggtgacgtc gatgcgaaag
     3901 ccggtgatac ctgcgaacgt gatctcgtag ccgatatcga cctgtcgcgc ctgctggccc
     3961 agcgccgcgg cgggcgcggc cagacacgcg gcaaaagcga tgaaggccct acgaaaagtc
     4021 atgaaatccc tttccagagg ggggcttact tcggccgtgc gggcacgata gaaggccctc
     4081 gcgcgccacg ccactgaact tgcaaccgtc ttgcgcgccc aataaggccc ttttcgtcca
     4141 tgtcgcctcc cgccactgcc cgcgttccca agctcagctt agcgcgcacc tgggcggttt
     4201 tgggcactct gggccggcat ttgtggccaa agggtgaaac cggcctgcgc tgccgcgtcg
     4261 tggttgcgct ggtgctcctc gtcctggcca aggtcgtcaa cgtctacgtg ccgatcctct
     4321 acaagcacgc ggtcgatgcg ctgggcggga cggcggcaca ggccgtcgcc gtgccggtcg
     4381 cgctcattgt cgcctacggc gtggcacgcg tgctggcgca ggccgtgggc gaaatccgcg
     4441 acgccatctt ctcgccggtg tcgcaacggg cgatccgcaa tctcgccctc gaagtcttcg
     4501 gccatctcca tgcgctgtcg ctgcgcttcc atctcgagcg ccagaccggc gggctgagcc
     4561 gcgtcatcga gcgcggcacg acgggcattg agttcctgat ccgcttcacc accttcaaca
     4621 tcctgccgac cctgctcgag atcaccctgg tcggggccat cctgtggagc ctctacgact
     4681 ggcgcttctc ggcggtgacc ttgttcgcca tcgcgggcta cgtcctcttc tcggtcaccc
     4741 tgtcggaatg gcgcatcaaa ttcgtgcgcc gcatgaacga ggccgacacc gaggccaacg
     4801 ccaaggcgat cgacagcctt ttgaactacg agaccgtcaa atatttcggc aacgaggcgc
     4861 acgaggcgcg ccgcttcgac gtcggccggc ggcgctacga gaccgcggcg atccgctcca
     4921 gccgcacgct gtcgctgctc aatgtcggcc agggcgcgct catctcggcg ggcctggtcg
     4981 ccgtgatgat catggcgggc tatggcgtcg ccgacggcac catgacgctg ggcgacttcg
     5041 tggcggtcaa cgccttcctg atccaactct accagccgct caatatgctg ggcttcgcct
     5101 atcgcgagat ccgcaacgcg ctcgtcaaca tggagcagat gttcggcctg ctcgaggtgc
     5161 cggccgagat cgccgacaag ccgggcgcgc cggccctcgc ggtgagtggc ggcgagatcg
     5221 tgttcgacca tgtcgatttc cactacgaga aggac
//
LOCUS       DASWGA010000608         3222 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1714684, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000608 DASWGA010000000
VERSION     DASWGA010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3222
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714684"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VF991_14235"
     CDS             <1..572
                     /locus_tag="VF991_14235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020181232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEX9557650.1"
                     /translation="NARVAWRLVAVVGGMLALAYAASPLYDMFCKATGFGGTPVVAQQ
                     GERPVLARTVAVRFDSNVDPNLSWRFQPIEREVKVRLGEEKLVFFRATNVSQRPIVGT
                     ATYNVTPEPAGPWFNKLQCFCFTEQLLQPGQSVDMPVLFFVDPEMDKDRRYDNVRTIT
                     LSYTFFEAKTERAKTLLGGTPANGSGKGG"
     gene            575..1447
                     /locus_tag="VF991_14240"
     CDS             575..1447
                     /locus_tag="VF991_14240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX9557651.1"
                     /translation="MADGAQKHPYHLVDPSPWPALGAIGAFLLAMGAALGMHPDMLGT
                     GVEKVVKSVEWWIVAPGLLLILAVMFWWWSDVIVESRKYHTAVVQLGLRYGMILFIAS
                     EVLFFAAFFWAFFDSALYPGAPEMPVRAEATGGVWPPKGIHVIAPFDLPFMNTLILLL
                     SGTTVTWAHHAILEGNKRDAVRGLLLTVLLGIAFTSIQAYEYANAPFGFRENIYSSTF
                     FMATGFHGFHVFVGTTFLLVCLFRAMAGQFKPQQHFGFEAAAWYWHFVDVVWLFLFFC
                     IYWWGAGKAPIALH"
     gene            1585..1947
                     /locus_tag="VF991_14245"
     CDS             1585..1947
                     /locus_tag="VF991_14245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HEX9557652.1"
                     /translation="MSEWPRQSPVDIALRGVCPRCGRGRLFRGLLTVVDRCAECGLDL
                     RGNDAGDGPAVFVILGLGAIVMMLVFWVEFRFEPPWWVHVVIWAPLTVGLAVWLLRLL
                     KALLIAQQYTHRSTALDG"
     gene            1958..2704
                     /locus_tag="VF991_14250"
     CDS             1958..2704
                     /locus_tag="VF991_14250"
                     /inference="COORDINATES: protein motif:HMM:NF014193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HEX9557653.1"
                     /translation="MIRLRPALWPTLMSLPIFVVALGLGLWQMERREWKRDILDRMAV
                     NQAARPLALDELLRGDPLSHEYGRVKFAGTFLHDKEFYLAARSLKNNVGLQVVTPLRT
                     DDGRVVLFDRGWIPQDKKDPARRAEGQVVGRVELTGIVRRNQERRQFAPENAPDRNVW
                     FHVDVPLMRGMAGGKPDPKLDAFFLEADAAPNPGGVPVGGQTRLDIPNDHLQYAITWF
                     LIAMALAGVYLAYHWENGRLTVAGRTKVKT"
     gene            2701..3222
                     /locus_tag="VF991_14255"
                     /pseudo
     CDS             2701..3222
                     /locus_tag="VF991_14255"
                     /inference="COORDINATES: protein motif:HMM:NF014165.4"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
BASE COUNT          478 a         1119 c         1046 g          579 t
ORIGIN      
        1 ggaatgcccg tgtggcctgg cggctggtgg ccgtcgtcgg cggcatgctg gcgctcgcct
       61 atgccgcctc gccgctttac gacatgttct gcaaggccac gggctttggc ggcacgccgg
      121 tcgtggccca gcagggcgag cggccggtgc tggcgcgcac cgtcgcggtg cgcttcgatt
      181 ccaacgtcga tcccaacctg tcgtggcgct tccagccaat cgagcgcgag gtcaaggtgc
      241 ggctgggcga ggagaagctg gtcttcttcc gcgccaccaa tgtctcgcaa cggccgatcg
      301 tcggcaccgc gacctacaat gtgacacccg agcctgccgg cccgtggttc aacaagctgc
      361 aatgcttctg cttcaccgag cagttgctgc agccgggcca gtcggtcgac atgcccgttc
      421 tcttcttcgt cgatcccgag atggacaagg atcggcgcta cgacaacgtc cgcaccatca
      481 cgctctccta caccttcttc gaggccaaga cggagcgggc gaagactttg ctgggcggca
      541 cgcccgccaa cggatccgga aaaggtggat gaacatggcc gacggcgcac aaaagcatcc
      601 ctatcacctc gttgacccca gcccgtggcc ggcgctgggc gcgatcggtg catttctgct
      661 ggccatgggt gccgcgctgg gcatgcatcc cgacatgctc ggcaccggtg tcgagaaggt
      721 cgtcaagtcg gtcgagtggt ggatcgtcgc tcctggcctg ctgctcatct tggccgtgat
      781 gttctggtgg tggagcgacg tcatcgtcga atcgcgcaag taccacaccg cggtggtcca
      841 gctcggcctg cgctacggca tgatcctgtt catcgcttcg gaggtgctgt tcttcgcggc
      901 gttcttctgg gccttcttcg actccgccct ctatcccggc gcgccggaga tgccggtgcg
      961 cgccgaagcc accggcggcg tctggccgcc caagggcatc cacgtcatcg cgcccttcga
     1021 cctgccgttc atgaatacgc tgatcctgct gctctcgggc accacggtca cctgggcgca
     1081 tcatgccatc ctcgaaggca acaagcgcga tgccgtgcgc ggtctgctgc tcaccgtact
     1141 gctcggcatc gcgttcacct cgatccaggc ctacgaatac gccaacgcac cgttcggctt
     1201 ccgcgagaac atctattcgt cgaccttctt catggcgacc ggcttccatg gattccacgt
     1261 tttcgtcggc acgaccttcc tgctggtctg cctgttccgc gccatggccg gccagttcaa
     1321 gccccagcag catttcggct tcgaggccgc cgcctggtac tggcacttcg tcgacgtggt
     1381 gtggctgttc ctgttcttct gcatctactg gtggggcgcc ggcaaggcgc ccatcgccct
     1441 gcactagaag ggcccacacc tgcctgtcat gttcctctcc cccgcgaggg ggagaggcta
     1501 ggtgaggggg ccaacgacgt gctcctcccc ctcacccaac ctctccccct gcgggggaga
     1561 ggagtctgat ttggggagct cgtgatgtcc gaatggccgc gtcaatcgcc cgtcgacatc
     1621 gccctgcgcg gcgtctgccc gcgctgcggc cgcggccggc tgtttcgcgg cctgctcacc
     1681 gtcgtcgacc gctgcgcgga gtgcggcctc gacctgcgcg gcaacgacgc cggcgacggg
     1741 cccgccgtct tcgtcatcct ggggctgggc gccatcgtca tgatgctggt gttctgggtc
     1801 gagttccgct tcgagccgcc atggtgggtt cacgtcgtga tctgggcgcc gctcaccgtc
     1861 gggctggcgg tgtggctgct gcgcctcctg aaggcgctgc tgatcgccca gcaatacacc
     1921 catcgctcga ccgcgctcga cggctagggg aacgatcatg atcaggctgc ggcccgcttt
     1981 gtggcccacg ctcatgtcgc tgccaatctt cgtggtcgcg ctcgggctcg gcctctggca
     2041 gatggaacgc cgcgagtgga agcgcgacat cctcgaccgc atggctgtca accaggccgc
     2101 ccggccgctg gcgctcgacg agctgctgcg cggcgatccg ctcagccacg agtacggccg
     2161 cgtgaaattc gccggcacgt tcctgcacga caaggaattc tatctcgccg cgcgcagcct
     2221 caagaacaat gtcggcctgc aggtcgtgac gccgctcagg acggatgacg gaagggtggt
     2281 gctgttcgat cgcggctgga ttccccagga caagaaggat ccggcgcggc gggccgaggg
     2341 ccaggtcgtg ggccgggtcg agctcaccgg catcgtgcgg cgcaaccagg agcgccgcca
     2401 gttcgcgccg gaaaacgcgc ccgatcgcaa tgtctggttc catgtcgacg tccccctgat
     2461 gcgcggcatg gccggcggca agcccgatcc caagctcgac gcgttctttc tggaagccga
     2521 tgcggcgccc aatcccggcg gcgtgccggt gggcggccag acgcgcctcg acattcccaa
     2581 cgaccatctg caatacgcca tcacctggtt cctgatcgcg atggcgctgg ccggcgtcta
     2641 tctcgcctat cactgggaga acggacgcct cacggtcgcc ggccgcacga aggtcaagac
     2701 atgatcgcca acgatcccta cgccgagctc gagcgccgct tcgcgcggct gagcgccgtc
     2761 aaccgcgcca gcgccatcct gaactgggac cgctcgacca tgatgccgga aggtgcgagc
     2821 gatgaccgcg ccgaccagct cgcgaccctg ggcgtgatcg cccacggcat gatctcggcg
     2881 cccgacatgc ccgaccttct agggcgggcg taggagggcg gcggcctcga tgcatggcgc
     2941 gccgccaacc tgcgcgagat gcggcgcgcc tgggtgcatg aaagcgcgct gcccgccgac
     3001 ctggtcgagg cgcgcacgcg ggccagctcg gcctgcgaga tggcgtggcg cgaggccagg
     3061 aagaacgccg atttcaagtc gctgctgccg acgctgtccg aagtcctgac cgtcgcgcgt
     3121 cgggtcggcg aggccaaggc ggccgcgctc ggcacgtcgc tctacgacgc gctgctcgac
     3181 gaattcgagc cgggcggccg cgcccagcgc atcgacctct tg
//
LOCUS       DASWGA010000609         2908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1837641, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000609 DASWGA010000000
VERSION     DASWGA010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1837641"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..168)
                     /locus_tag="VF991_14260"
     CDS             complement(<1..168)
                     /locus_tag="VF991_14260"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HEX9557654.1"
                     /translation="MIKTIGLLTRKDGFTHAQFMRHWVEVHGPLALGVPGLRRYVQNH
                     IRAERARPDIPE"
     gene            326..1114
                     /locus_tag="VF991_14265"
     CDS             326..1114
                     /locus_tag="VF991_14265"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9557655.1"
                     /translation="MTRLLAILLLVLSAGSASAQPVRFPGVAVGPSAAGPEIPGWIYR
                     PAGAGPFPAIILAHTCAGTSAHTEIWGKLLASWGYLVLAPDSFGPRGHKQVCTNGSAV
                     TGGMRVADIAGALKFLAERPDVQPGKIGLIGHSHGGWTVMRAVQKSYGLGALGLKAAV
                     AYYPSCAPQFDRDVDLPLLILIGDKDDWTPADRCRQLQAAGFTKPELVQAIYYPNAYH
                     SFDSRLPDRSVPGNASTMHRLGYDPAAAPDAEARTRAFFDKYLR"
     gene            complement(1222..2163)
                     /locus_tag="VF991_14270"
     CDS             complement(1222..2163)
                     /locus_tag="VF991_14270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HEX9557656.1"
                     /translation="MDRLSDQDLFTPPMTFMGAPYGRPGPGTKAAILGIPFDCGTNMR
                     IGARGGPDSVRQQSALMRRFNPTHADFDPVAALGLVDCGNVRLTPGKIVDAFARTEQA
                     VDRIVEAGAIPITIGGDGSVTVPVARAVGKKHRKMAALHIDSHTDSYPYGAAEKYNSA
                     TQFTHVAEEGLVDPEFSWHVGIRSTTYAQGVVPRALSLGYKVVSLDELVRSGFAQRMA
                     EFRDKVGKRPVYLCFDMDVFDPSCAPGVCTPSWGGLSAREGIDLLRCLTDLNIVAVDV
                     NTVSPPQDVNGMAAHLCAHVIYETLVLLCRQMKLAGG"
     gene            complement(2166..>2908)
                     /locus_tag="VF991_14275"
     CDS             complement(2166..>2908)
                     /locus_tag="VF991_14275"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9557657.1"
                     /translation="ARGDANICGDVGSPRVVRFGEKGLMWVEIEATGTPAHGAHVHRG
                     TNAIDRLREALDRLKELEAIPFQAPAAVTEAISNAKAISEALSGAGEADTLSRVTVNI
                     GTLSGGTSPNLVPTHAIARADIRLPVGITTDVLVRKLDEWLSPLAGVSWRAIRRFEPS
                     FTEPGHEIVRRTVQVATEVLGEKPALNMRVGGSDSRWYRQHGVPTVVLGLTPFNMGGA
                     DEYVLVDELLAVAKIHTLVAFDFLSAEH"
BASE COUNT          465 a          991 c          982 g          470 t
ORIGIN      
        1 ctcgggaatg tcggggcggg cgcgctcggc gcgaatgtga ttctggacat agcggcgcaa
       61 accgggaacg ccgagcgcca gcggtccgtg cacctcgacc cagtgccgca tgaactgcgc
      121 gtgcgtaaag ccgtccttgc gtgtcaacag cccgatggtc ttgatcatgt ggcggtccct
      181 ctcaactcaa gttcctctcc cctcaactca aattcctctc ccccgctagg gggagaggct
      241 aggtgagggg gcaacgacgt gtgtatcccc ctcacccgtc ctctccccct agcgggggag
      301 aggagcctga tcgatagtat ccgccatgac ccgcctgctc gcgatcctct tgctggtgct
      361 gtccgccggc agtgcgtcag cccagcccgt ccgctttccc ggcgtcgccg tcggccccag
      421 cgccgccggg ccggagattc ccggatggat ctaccggccg gccggcgccg ggccgttccc
      481 ggcgatcatc ctggcgcaca cttgcgccgg cacctccgcg cataccgaga tctggggcaa
      541 gcttttggcg agctggggct acctcgtgct ggcgcccgat tcgttcggcc cgcgcggcca
      601 caagcaggtc tgcaccaatg gcagcgcggt cacgggcggc atgcgggttg ccgacattgc
      661 cggcgcgctg aaattcctgg ccgagcggcc cgacgtccag cccggcaaga tcggcctgat
      721 cggccacagc catggcggct ggacggtgat gcgcgcggtg cagaagagct acgggctggg
      781 cgcgctggga ctcaaggcgg cggtcgccta ctacccgtcc tgcgcgccgc agttcgaccg
      841 cgacgtcgac ctgccgctgc tgatcctgat cggcgacaag gacgactgga cgccggccga
      901 tcggtgccgc cagctccagg ccgccggctt taccaagccg gagctggtcc aggcgatcta
      961 ctatccaaac gcctatcaca gcttcgattc gcgcttgccc gaccgcagcg tgccgggcaa
     1021 cgccagcacg atgcatcgcc tgggctacga tcccgccgcc gcgcccgacg ccgaggcgcg
     1081 caccagggcg ttcttcgaca aatacctgcg ctagtcttct catgctcttc cggaccgcga
     1141 gcgcctgtcc tgagcgaagc cgaaggatct cgctcgctca tgatcatgag cgaggctcgc
     1201 gatccggaag agtatgagcg gctagccgcc ggcgagtttc atctggcggc aaagcaatac
     1261 cagcgtctcg tagatcacat gggcgcagag atgggcggcc atgccgttca catcctgcgg
     1321 cgggctcacc gtgttcacat cgactgcgac gatgttgagg tcggtgaggc agcgcagcag
     1381 gtcgatgcct tcacgcgcac tgagtccgcc ccacgacggc gtgcacacgc ccggcgcgca
     1441 cgacggatcg aacacgtcca tgtcgaagca gagatagacc ggccgcttgc ccaccttgtc
     1501 gcggaactcg gccatgcgct gggcgaagcc gctgcgcacc agctcgtcga gcgacaccac
     1561 cttgtagccg aggctcaagg cgcgcggcac cacgccctgg gcgtaggtcg tgctgcggat
     1621 gccgacatgc caggagaatt ccggatcgac caggccctct tcggcgacat gggtgaactg
     1681 ggtggcggag ttgtacttct ccgccgcgcc gtagggatag gaatcggtgt gcgaatcgat
     1741 atgcagcgcc gccatcttcc tgtgcttctt gccgacggcg cgcgccaccg ggaccgtcac
     1801 cgacccgtcg ccgccgatgg tgatgggaat ggcgccggcc tcgacgatgc ggtcgaccgc
     1861 ctgctcggtg cgcgcgaagg cgtcgacgat cttgcccggc gtcagcctga cattgccgca
     1921 atcgaccagg cccagcgccg ccaccggatc gaagtcggca tgggtcggat tgaagcggcg
     1981 catcagcgcc gactgctggc gcaccgaatc ggggccgccg cgcgcgccga tgcgcatgtt
     2041 ggtgccgcag tcgaacggga tgccgaggat cgccgccttg gttccgggcc ccggccggcc
     2101 gtaaggcgcg cccatgaagg tcatcggcgg agtgaacagg tcttggtcgg acaggcggtc
     2161 catggtcagt gctccgcgga gaggaagtcg aaggcgacga gggtgtggat cttggccacg
     2221 gctagaagct cgtcgaccag aacatactcg tcggcgccgc ccatgttgaa gggcgtcagc
     2281 cccagcacca cggtcggcac gccgtgttgg cgataccagc gcgaatcgga gccgccgacc
     2341 cgcatgttca gcgccggctt ctcacccagc acctcggttg cgacctggac ggtacgccgg
     2401 acgatctcgt ggccgggctc ggtgaaggag ggctcgaagc ggcggatcgc gcgccagctc
     2461 acgccggcga gcgggctcag ccactcgtcg agctttcgca ccagaacgtc ggtggtgatg
     2521 ccgaccggca gccggatgtc ggcacgggcg atggcatgag tcggcaccag gttgggcgag
     2581 gtgccgcccg agagggtgcc gatattcacg gtgacgcgcg agagcgtgtc ggcctcgccg
     2641 gcgcccgaca gcgcctccga gatcgctttg gcgttgctga tggcctcggt gacggcggcc
     2701 ggcgcctgga agggaatcgc ctcgagctct ttcaggcgat cgagcgcctc cctcagccga
     2761 tcgatggcat tggtgccgcg gtggacgtgc gcgccgtgcg ccggcgttcc cgtggcctcg
     2821 atctcgaccc acatcagacc cttctcgccg aagcgcacga cgcgcgggga accgacgtcg
     2881 ccgcagatat tggcatcgcc ccgggcat
//
LOCUS       DASWGA010000610         8151 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2347194, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000610 DASWGA010000000
VERSION     DASWGA010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8151
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2347194"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VF991_14280"
     CDS             complement(<1..339)
                     /locus_tag="VF991_14280"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEX9557658.1"
                     /translation="MRKIISDIPKFVVAFLLVAAIVNLLIGVFLRYVMLEVTDWLDVD
                     PIRFTWVEEVGEMMLAWLTLIGAAIGVRERTHFTLHVLQLSPAAQVWAERIHHVLIAG
                     FGGLAAWYGVK"
     gene            complement(357..1388)
                     /locus_tag="VF991_14285"
     CDS             complement(357..1388)
                     /locus_tag="VF991_14285"
                     /inference="COORDINATES: protein motif:HMM:NF037995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9557659.1"
                     /translation="MTVMKISSRSLSSIRRRSLVKGGMAGILASGLAPSFARAEAKKL
                     VMAHLNAVPESAAVAFDWQAQEVRKRSGGELDMQFFGSTLLNKELEIMNAVKSGNIAI
                     GNPGGAAATVFPEMGVFLVPYLVQSYDQAYKMFNGKIGDALDKQFQEKYKLKTLCFFD
                     YGFRHFWTSKKAIVEPKDLRGAKIRVQQAKVFGDTINGLGGNAVPMAWGEVISAAKSG
                     VIDGGDLPIVNQIALKIYEVSKYCSMTFHNYGPTLNTMNLAVWEGLSEPHKKLMLDTS
                     REAQAKCRELTESVDNFAAAKRELEPKGMTVVQANVEAFRKVAQEKIWPAYKQQYAGL
                     WDQIAEFKA"
     gene            complement(1566..3284)
                     /locus_tag="VF991_14290"
     CDS             complement(1566..3284)
                     /locus_tag="VF991_14290"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557660.1"
                     /translation="MVDLVIRGAIIVDGLGHEPKRADLAVKDGRIAAIGEVTDKGAET
                     IDADGLVLSPGIVDVHTHYDAQVTWDATLSPSPSLGVTTAVMGNCGFGIVPAPPNARD
                     LVIRNLSVVEGMDLDALRQGIAWDFESFADYMAMLRRRGAYANLAVLAGHSTIRTAVM
                     GEDASQRKEATPEELARMKAMVADAMAHGAIGLGASYSLNHSGYGGVPMPSTIAPMSE
                     LDALVGAMGPRGRGVVEIASGAKMPQELEPMAAKHGRPFFQGTGMAMYNEREPLRALR
                     IFDDCAAALRRGAGLYVQIPCQPLSFDFTMANAYPFYSHPAFDPIKAYTPEQLKPVFR
                     DPSWRAKFRENAKNPRPGMIFQGNWDRVMVAVPHKASNAKYANRYATEIAKSEHRDPL
                     DVVLDLALDENLETAFLGRFLNVGDEGVARLLKHEAGVVALSDAGAHLIYMCDAGFGL
                     HFLAHWVRERGDFDLAEGIRRLTSHPADLYGIPNRGRLTVGAQADLLLFDPATVGVSP
                     AERVADLPGGGRRTIRRPTGVHGVFCNGVRTFDGKDYVKHAKGPGHVLDRFDSSQGRH
                     SAIAAQ"
     gene            complement(3284..5584)
                     /locus_tag="VF991_14295"
     CDS             complement(3284..5584)
                     /locus_tag="VF991_14295"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HEX9557661.1"
                     /translation="MASSGSEAMVNEMGDLDGDSLRMHREGRPGKIEIIATKPLVTQR
                     DLALAYSPGVAAPCLEIAKDANTAYDYTIRGNLVAVISNGTAVLGLGDIGALASKPVM
                     EGKAVLFKRFADVDCIDLEVNTKDVDEFVNCVRFLGPTFGGINLEDIKAPECFIIEQR
                     LRELMDIPIFHDDQHGTAIVSAAGLINALHLTGRNIKDIKMVVNGAGAASIACIELIK
                     AMGMPHENAILCDTKGVIWQGRTEGMNQWKSAHAVRTKARTLEEAMKGADVFFGLSVK
                     GAVTKAMVKSMAAQPIIFAMANPDPEITPEDVRSVRSDAIIATGRSDYPNQINNVLGF
                     PYIFRGALDVRARTINEEMKVAAAEALAKLAREDVPDEVDRAYSGRRLRYGPEYVMPV
                     PFDPRLISAVSSAVAQAAMDSGVARRPIPDMAEYKRALSGRLDPTSHWLQSLFDQVKA
                     NPQRIVFAEGEEERIIRAAVVFRDNGYGTPVLIGREEQVRETMKGLGITDTTGMEIHN
                     ARLSTRNKPYTDMVYKRLQRDGYLRRDVQRMVNQGRNVFGACMVAMGDAAGMVTGITR
                     RFPECYSDIQRVIDARPDKVAIGYSIVVARHGTVFLADTSINETPSPEQLATIAKQMV
                     GNARTMGHEPRVAFLSFSNFGSREIDRIDRIRKAIRLLDAEKVDFEYDGEMQADMALD
                     YELLRETYPFCRLTGPANVLVMPGLHSAHISSRLMQRLGGVTVIGPVIDGLQKPVQIV
                     QMGATVSDLVNHAALAAYGALNGRRE"
     gene            complement(5680..7113)
                     /locus_tag="VF991_14300"
     CDS             complement(5680..7113)
                     /locus_tag="VF991_14300"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX9557662.1"
                     /translation="MEAAGLWMLLAVAAVLLGTGLPAFAVLMGVSVLFGAVGLATGGL
                     EWALLTALPSRIIGLLENDLLQALPLYVFMGALLNRLPLADRLFRCGVALGGRSTASP
                     ALATLGLGALLAPMNGSVGASVAMLSRSVAPKLAQRGVPAAESTALVCVASTLGVVIP
                     PSLVLILLGDAMMRAHTEAANVTKEMVRIVNTQDIFRGALVPAALFLVLCLVVAWLLG
                     RRTLARRSRERPQAGEWVTAAIAAVFVIGLLAGVAAGYFYAVEAAAMGGTALLLYGLL
                     SGGLRGDAFRAVLHDTMAVTGALFALFVAATTFTLLFRAFGSDRLLDAWVALVPGGAT
                     GAAITVLVVFALSAFVLDAFEIVFVIVPIVMPSILTRAPDAVWISVLALLALQASFLV
                     PPSGYAVMMARSALADRAPIRQLTRALAPYLAAQLVVLALVVLLPQLAHLAQPKGASA
                     PPVEKIDDETARQRFNDMLKLPLPPEE"
     gene            complement(7117..7596)
                     /locus_tag="VF991_14305"
     CDS             complement(7117..7596)
                     /locus_tag="VF991_14305"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEX9557663.1"
                     /translation="MAWLDGVDRAVGRLIGAGRWLVLPVALILFLQWPLRDFVRAWSR
                     EANDLGQWIFALYVSLAMTFATRERAHLAVDAIAHGYSARLRGLIARWGGFACVAPWA
                     LFMIWTIGPTVQRSVLGLEKFPDTFNPGYFLVKVAALLLAVLALVQALLDLRRPARD"
     gene            7707..>8151
                     /locus_tag="VF991_14310"
     CDS             7707..>8151
                     /locus_tag="VF991_14310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX9557664.1"
                     /translation="MMRQYLAIKAAHPDHLVFYRMGDFYELFFDDAVKASAALDIALT
                     KRGQHLGEDIKMCGVPVHSHEAYLSRLIRQGFKVAVCEQVEDPAEAKKRGAKSVVERA
                     VVRVITPGTLTEDSLLDARSHNYLAALAEAQGELALAWLDLSTADF"
BASE COUNT         1368 a         2692 c         2772 g         1319 t
ORIGIN      
        1 cttcacgccg taccaggcgg cgagcccgcc gaatcctgcg atcagcacat ggtggatgcg
       61 ttcggcccaa acctgagcgg cgggcgacag ctgcaggacg tgcagggtga agtgggtgcg
      121 ttcgcgcacg ccgatcgccg cgccgatcaa ggtgagccag gccagcatca tctcgcccac
      181 ctcctcgacc caggtgaaac ggatcggatc gacgtcgagc caatccgtca cctcgagcat
      241 cacatagcgc aggaacacgc cgatcagcag attgacgatg gcggcgacca gcaggaaggc
      301 gacgacgaac ttgggaatgt cgctgatgat cttccgcatc ggggcgacgc gcgcccctat
      361 gccttgaact ccgcgatctg gtcccacagg ccggcatatt gctgcttgta ggccggccag
      421 atcttctcct gcgcgacctt gcggaaggcc tcgacattgg cctgcaccac cgtcatgccc
      481 ttgggctcaa gctccctctt cgccgcggcg aagttgtcga ccgattcggt gagctcgcgg
      541 cacttggcct gcgcctcgcg gctggtgtcg agcatcagct tcttgtgcgg ctcgctcaag
      601 ccctcccaca ccgcgaggtt catggtgttg agcgtgggac cgtaattgtg gaaggtcatc
      661 gagcagtatt ttgagacctc gtagattttc agcgcgatct ggttgacgat cggcaggtcg
      721 ccgccgtcga tcacgcccga cttggcggcc gagatgacct cgccccaggc catcggcacg
      781 gcgttgccgc ccagcccgtt gatggtgtcg ccgaacacct tggcctgctg cacgcggatc
      841 ttggcgccgc gcaggtcctt gggctccacg atcgccttct tgctcgtcca gaagtggcgg
      901 aagccatagt cgaagaagca cagcgtcttg agcttgtact tctcctggaa ctgcttatcg
      961 agcgcgtcgc cgatcttgcc gttgaacatc ttgtaggcct ggtcgtagct ctgcacgagg
     1021 tagggcacca ggaacacgcc catctcgggg aacaccgtcg ccgcggcgcc gccggggttg
     1081 ccgatggcga tgttgcccga cttcacggcg ttcatgatct cgagctcctt gttgagcaag
     1141 gtcgagccga agaactgcat gtcgagctcg ccgcccgagc gcttgcgcac ttcctgggcc
     1201 tgccagtcga aggcgaccgc cgccgattcc ggcacggcgt tgaggtgggc catcaccagc
     1261 ttcttggcct cggcgcgggc gaagctgggc gccagtccgc tggcgaggat accggccatg
     1321 ccgcccttga ccaggctgcg gcggcggatg gaagacagac tccggctgct gattttcatg
     1381 accgtcatgg cgccctccca ggcgatttgc ttatgacaac cctatactgg cagcagggga
     1441 gcgggaagca tccccgtctg tcatcctgag cgaagcgaag gatctcatgc ccatggcaac
     1501 cggcgatgag atccttcact tcgctccagc gcgggggcta ccccgcgcgc gatgacagtt
     1561 caggatcatt gcgcagcgat ggctgaatgc cgtccttgcg aggaatcgaa ccggtcgaga
     1621 acatggccgg ggcccttggc gtgtttcaca tagtctttgc cgtcaaatgt ccgcacaccg
     1681 ttgcagaaca caccatgcac gccggtcgga cggcggatgg tgcgtcggcc gccgcccggc
     1741 aggtcggcca cccgctcggc cgggctgacg cccacggtgg cgggatcgaa caacaagagg
     1801 tcggcctgcg cgccgaccgt gagccggcca cggttcggga tgccgtagag gtcggcggga
     1861 tggctggtca ggcggcggat gccttcggcc aggtcgaaat cgccgcgctc gcgcacccaa
     1921 tgggccagga agtgcagacc aaagcccgcg tcgcacatat agataaggtg cgcaccggca
     1981 tcgctcagtg ccaccacgcc cgcctcatgc ttgagcaggc gcgccacgcc ctcgtcaccg
     2041 acattcagga aacggccgag gaaggcggtc tcgagattct cgtcgagcgc caggtcgagc
     2101 accacgtcca aaggatcgcg atgttccgat ttggcgatct cggtggcgta gcggttggcg
     2161 tacttggcgt tcgaggcctt gtgcggcacg gccaccatca cgcgatccca gttgccctgg
     2221 aagatcatgc cgggccgcgg gttcttggca ttctcgcgga acttggcgcg ccacgacggg
     2281 tcgcggaata cgggcttcag ttgctcgggc gtgtaggcct tgatcggatc gaaggccgga
     2341 tggctgtaga acggataggc gttggccatg gtgaagtcga acgacagggg ctggcagggg
     2401 atctggacat agagtccggc gccgcggcgc agcgcggcgg cgcagtcgtc gaagatgcgc
     2461 aaggcgcgca gaggctcccg ctcgttgtac atcgccatgc cggtgccctg gaagaacggc
     2521 cttccgtgct tggccgccat cggctccagc tcctgcggca tcttcgcgcc cgaggcgatc
     2581 tcgaccacgc cccggccgcg cggccccatg gcgccgacca gcgcgtcgag ctcggacatc
     2641 ggcgcgatgg tcgacggcat cggcacgccg ccatagcccg aatggttgag cgaataggag
     2701 gcgccgaggc cgatggcgcc gtgcgccatg gcgtcagcca ccatcgcctt catgcgcgcg
     2761 agctcctctg gcgtggcttc cttgcgctgc gaggcgtcct cgcccatcac cgcggtgcgg
     2821 atggtcgaat ggccggccag cacggccaag ttggcgtagg cgccgcgccg gcgcagcatc
     2881 gccatgtagt cggcaaagct ctcgaagtcc caggcgatgc cctggcgcag ggcgtcgagg
     2941 tccatgccct cgacgaccga gagattgcgg atcaccaggt cgcgcgcgtt gggtggcgcg
     3001 ggcacgatgc cgaagccgca gttgcccatc accgccgtgg tgacgccgag cgagggcgat
     3061 ggcgagaggg tagcgtccca ggtgacctgc gcgtcgtagt gcgtgtggac gtcgacgatg
     3121 ccgggcgaga gcaccaggcc atcggcgtcg atcgtctcgg cgcctttatc cgtgacctcg
     3181 ccgatggcgg cgatgcggcc atccttgacc gcaaggtcgg cgcgcttggg ctcgtggccc
     3241 agcccgtcga cgatgatggc gccgcggatg acgagatcga ccatcactcc ctccgtccgt
     3301 tgagcgcccc ataggccgca agggctgcgt gattcaccag gtcgctgacc gtggccccca
     3361 tctgcacgat ctgcaccggc ttctgcagtc cgtcgatcac cggcccgatc accgtgaccc
     3421 cgcccagccg ctgcatcagg cgcgacgaga tatgcgcgga gtgcaggccc ggcatcacca
     3481 gcacgttggc cggcccggtc aggcggcaga acggataggt ctcgcgcaac agctcgtagt
     3541 cgagcgccat gtcggcctgc atctcgccgt catattcgaa gtcgaccttt tccgcgtcca
     3601 ggaggcggat cgccttgcgg atgcgatcga tgcggtcgat ctcgcggctg ccgaagttgg
     3661 agaaggacag gaacgcgacg cgcggctcgt ggcccatggt gcgggcattg ccgaccatct
     3721 gtttggcgat ggtggcgagc tgctcggggc tgggtgtctc gttgatcgag gtgtccgcca
     3781 ggaacaccgt gccgtggcgc gccacgacga tggaatagcc gatcgccacc ttgtcgggac
     3841 gcgcgtcgat cacgcgttgg atgtcgctgt agcattccgg gaagcggcgg gtgatgccgg
     3901 tcaccatgcc ggcggcatcg cccatcgcca ccatgcaggc gccgaacacg ttgcggcctt
     3961 ggttgaccat gcgctgcacg tcgcggcgca gatacccgtc gcgctgcagg cgcttgtaaa
     4021 ccatgtcggt atagggcttg ttgcgcgtcg atagccgggc gttgtggatc tccatgccgg
     4081 tggtgtcggt gatgcccagc cccttcatgg tctcgcgcac ctgctcctcg cggccgatca
     4141 gcaccggcgt gccgtagccg ttgtcgcgga acacgacggc ggcgcggatg atgcgctcct
     4201 cctcgccttc ggcgaacacg atgcgctgcg gattggcctt cacctggtca aacagactct
     4261 gcagccaatg gctggtcgga tcgaggcggc ccgagagcgc ccgcttatat tccgccatgt
     4321 cgggaatcgg ccggcgggcg acgcccgaat ccatcgccgc ttgcgccacc gccgacgaca
     4381 ccgccgagat caggcgcgga tcgaacggca cgggcatgac gtactcggga ccatagcgca
     4441 gccggcggcc ggaataggcg cggtcgacct cgtcgggcac gtcctcgcgg gcgagcttgg
     4501 ctagcgcctc ggcggccgcc accttcatct cctcgttgat ggtgcgcgcc cgcacgtcga
     4561 gcgcgccgcg gaagatgtag gggaagccca gcacgttgtt gatctggttg ggatagtcgc
     4621 tgcggccggt ggcgatgatg gcgtcgctgc gcaccgagcg gacgtcctcg ggcgtgatct
     4681 cggggtcggg attggccatc gcgaagatga tcggctgggc cgccatcgac ttcaccatcg
     4741 ccttggtcac cgcacccttg accgagaggc cgaagaagac gtcggcgccc ttcatcgcct
     4801 cctcgagcgt gcgcgccttg gtgcgcacgg catgggcgct cttccactgg ttcatgccct
     4861 cggtgcggcc ctgccagatc acgcccttgg tgtcgcacag gatggcgttc tcgtgcggca
     4921 tgcccatcgc cttgatgagc tcgatgcagg cgatcgacgc ggcaccggcg ccgttcacca
     4981 ccatcttgat gtccttgatg ttgcggccgg tgaggtggag cgcgttgatc aggccggcgg
     5041 ccgagacgat ggcggtgccg tgctggtcgt cgtggaagat cgggatgtcc atcagctcgc
     5101 gcaggcgctg ctcgatgatg aagcactcgg gcgccttgat gtcctcgagg ttgatgccgc
     5161 cgaaggtggg gccgaggaag cgcacgcagt tgacgaactc gtcgacgtcc ttggtgttga
     5221 cttccaggtc gatgcagtcg acgtcggcga agcgcttgaa cagcacggcc ttgccttcca
     5281 tcaccggctt gctggccagc gcgccgatgt cgcccaggcc gagcacggcg gtgccgttgg
     5341 agatcacggc gacgaggttg ccgcggatgg tatagtcgta ggcggtgttg gcgtccttgg
     5401 cgatttccag gcagggcgcg gcaacgcccg gcgaataggc cagcgccagg tcgcgctggg
     5461 tcaccagcgg cttggtggcg atgatctcga tcttgccggg ccggccctcg cgatgcatgc
     5521 gcagcgaatc gccgtcgaga tcgcccatct cgttgaccat tgcttccgag ccgctgctcg
     5581 ccatcgtcat gtctctcccg gttgagaggg catattggcg gcaatccccg gtcggggcca
     5641 gccggccgtg ccgcgccgca acgcaggtgc gaaacagcac tattcttcgg gcggcaacgg
     5701 cagcttcagc atgtcattga accgctggcg ggcggtttcg tcgtcgattt tttcgacggg
     5761 tggcgcactg gcccctttgg gctgcgcgag gtgtgcgagt tggggcagca ggaccaccag
     5821 cgccagcacg acgagctgcg cggcaagata gggtgccagc gcccgcgtga gttgccggat
     5881 gggcgctcgg tcggcaagcg cgctcctcgc catcatcacg gcatagccgc tgggcggcac
     5941 caggaagctc gcctgcaggg ccagcagcgc cagcaccgag atccagaccg cgtcgggcgc
     6001 gcgcgtcagg atcgacggca tgacgatggg cacgatcacg aacacgatct cgaaggcgtc
     6061 gagcacgaac gctgagagcg cgaacaccac cagcacggtg atggcggcac cggtggcgcc
     6121 gcccggcacg agagcgaccc aggcgtcgag caggcggtcg gagccgaagg cgcggaacag
     6181 cagggtgaag gtggtggcgg cgacgaacag ggcaaacagc gcgcccgtca cggccatggt
     6241 gtcgtgcagc accgcgcgga aggcatcgcc gcgcaggccg ccgctcaaaa ggccgtagag
     6301 cagcagcgcc gtgccgccca tggcggccgc ttcgacggca tagaagtagc cggcggcgac
     6361 gcccgccagc aggccgatca cgaagactgc ggcgatggca gcggtcaccc attcgcccgc
     6421 ctgcggccgc tccctcgaac gacgcgcgag cgtgcgacgg ccgagcagcc acgccacgac
     6481 aaggcagagc acaaggaaga gcgccgccgg caccagcgca ccgcggaaga tgtcctgggt
     6541 gttgacgatg cgcaccattt ccttggtgac attggcggcc tcggtatggg cccgcatcat
     6601 ggcgtcgccc agcaggatca gcaccagcga gggcgggatg acgacgccca gcgtgctggc
     6661 gacgcagacc agcgcggtgc tctcggccgc cggcacgccg cgctgggcga gcttgggcgc
     6721 gacgctgcgc gaaagcatgg cgacgctcgc cccgaccgag ccgttcatcg gcgccagcaa
     6781 tgcgcccagc cccagggtgg cgagggccgg cgatgcggtc gagcggccgc ccagcgccac
     6841 gccgcagcgg aacagccggt cggcgagcgg caggcggttg agcagcgcgc ccatgaagac
     6901 atagagcggc agcgcctgca gcaggtcgtt ctccaaaagc ccgataatgc ggctgggcag
     6961 cgccgtcagc agcgcccatt ccaggccgcc cgtggcgaga ccgaccgcgc cgaacagcac
     7021 cgatacgccc atcagcacgg caaaggccgg caatccggtt cccagcagca cggcggcgac
     7081 ggccagcagc atccagaggc cggccgcttc catcgatcaa tccctcgccg gccggcgtag
     7141 gtcgagtaac gcctgcacca gtgccagcac cgccagcagc agcgcggcga ctttcaccag
     7201 gaagtagccg ggattgaagg tatcgggaaa tttctccagg cccagcaccg agcgctgcac
     7261 ggtgggcccg atcgtccaga tcatgaaaag cgcccacggc gccacgcagg cgaagccgcc
     7321 ccagcgggcg atgaggccgc gcagccgcgc gctgtagccg tgcgcaatgg cgtccacggc
     7381 gagatgggcc cgttcgcgcg tggcgaaggt catggcaagg ctgacataga gcgcgaagat
     7441 ccattgcccg agatcgttgg cctcgcgcga ccaggcgcgc acgaaatcgc gcaagggcca
     7501 ctgcaggaac aggatcaagg cgaccggcag caccagccag cggccggcgc cgatcagcct
     7561 gcccaccgcg cgatcgacgc catccagcca agccacgttg atttccccca attggccccc
     7621 aatcgcggaa ggcgccggca tgctaaaccg ttttcgtgcc cgacagcagc ccctcgacct
     7681 cggcggttcc ggccgatgcc acgcccatga tgcgccagta cctggccatc aaggcggcgc
     7741 atcccgatca tctggtgttt taccggatgg gcgatttcta cgagctgttc ttcgacgacg
     7801 ccgtcaaggc ctcggcggcg ctcgacattg cgctgaccaa gcgcggccag catctgggcg
     7861 aagacatcaa gatgtgcggc gtgccggtgc acagccacga ggcctatctg tcgcggctga
     7921 tccgccaggg cttcaaggtc gcggtctgcg agcaggtcga ggatccggcc gaggccaaga
     7981 agcgcggcgc caaatcggtg gtcgagcgcg ccgtggtgcg ggtcatcacg ccgggcacgc
     8041 tcaccgagga ctcgctgctc gacgcgcgca gccacaatta tctcgccgcc ctcgccgagg
     8101 cgcagggcga gctggcgctt gcctggctcg acctgtcgac cgccgacttc g
//
LOCUS       DASWGA010000611         5898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_193128, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000611 DASWGA010000000
VERSION     DASWGA010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5898
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193128"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..590
                     /locus_tag="VF991_14315"
     CDS             <1..590
                     /locus_tag="VF991_14315"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9557665.1"
                     /translation="AAHPHLTVDPMVAGANIVLALQTIVARNIDPIDSTVVTVGFFKA
                     GSAYNVIPGEVHIGGTTRTTTPQNRALVKRRIEEICRGAEQMHGVKIEIEHKPGYPST
                     VNNVERARFAIDVAAGVCGEHAVADNVRPSMGAEDFSYMLERVPGAMVWLGNGGGADA
                     VSLHNSRYDFNDMAIPFGVSFFVRTVERFLGDQRT"
     gene            611..2371
                     /locus_tag="VF991_14320"
     CDS             611..2371
                     /locus_tag="VF991_14320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015441 - ABC-type beta-glucan transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015775 - beta-glucan transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan ABC transporter ATP-binding protein/
                     permease"
                     /protein_id="HEX9557666.1"
                     /translation="MEFFRVYGRVIGLLRAERKLAITLALANVAVAALQFYEPVLFGK
                     VVDLLSSAKDKSVDELWHGARELLILWAVVGLGGIVANIVVSLQADRMAHRRRLGAMA
                     NFFEHVLVLPFSFHSGQHSGRLIKVMLTGVDHLFGIWLSFFRENLATFVALFIMLPLS
                     LLMNWRLGVLLVVLILFFAAANIFVVSRTDRLQHEVEDLHSELASRAGDALGNINLIQ
                     SFVRLTAETGEMHRIIGQTLAAQFPVLNWWALLSVMTRAASTITVILIFVLGTWLYTQ
                     GKASVGEIVSFMGFATMLIGRMDQASGFVSRVFFQMPALADFFRVLDSQSAVPDNPHG
                     KDIGRARGDVEFDDVNFSYDGRRPALVHFSLKVPAGTKVALVGPTGAGKSTALSLLHR
                     MWDAQSGGIRIDGIDHREIKLESLRRNIGVVFQDSTMFYRSIADNLRIGKPDATQAEL
                     EEAAGLAEAHDFIMRQPQGYETMVGERGTTLLGGERQRLAIARALLKNPPILILDEAT
                     SALDSVTEARIQKALKTLMQGRTTFVIAHRLSTIRDVDLVVVFEHGRIAEQGSYRELM
                     SRGGAFARLVATQQAGIESA"
     gene            2445..3458
                     /locus_tag="VF991_14325"
     CDS             2445..3458
                     /locus_tag="VF991_14325"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557667.1"
                     /translation="MNKFAKWLGSAAAAAVALASLPANAQTAIKFTLDWVFQGPTAPF
                     LVALEKGYYKAEGLDVTMDPGQGSAGAVQRVATGAYQIGFADVNSTIEYNAKNPGKEV
                     LCVFMAYDFAPFGVYALKKSGIKGPKGLEGKKLGAPVFDASFRLFPAFAKLNGITKWE
                     HVNLTPQLREQSLVQGTVDFISGHYFSSMLDLKARGVKFDDVVAMRYVDFGMDVYGNG
                     IVVSPEMAKDEKAVKGFIAATLKGWKDVIADNKLGIAAAKKRDPLIDEALETERLQIS
                     LQTNILTPYVKANGMGDVDPQRFARSVKLVSDAFGLPAAPAPDKVFTNKYLPPKADRM
                     VAK"
     gene            3461..4246
                     /locus_tag="VF991_14330"
     CDS             3461..4246
                     /locus_tag="VF991_14330"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557668.1"
                     /translation="MPFVDLKGVSLTYRLGKETTLALADATFGIDKGEFIAVVGPSGC
                     GKSTIMKLVTGLLPASSGEVRVAGEKVTGPVKGVGMAFQNPTLMPWRTTMDNILLPME
                     VVEPHKRRFRSHRAEYEERAMKLLATVGLADFARKFPWQLSGGMQQRSNLCRALIHEP
                     ELLMLDEPFGALDAFTREELWGVMQALWLDKRFTGALVTHDLREAVYLADRVYVMSRR
                     PGRIVLSRQIDIPRPRTLATTFEPHFVEIVHELRDRISQEHAP"
     gene            4243..5019
                     /locus_tag="VF991_14335"
     CDS             4243..5019
                     /locus_tag="VF991_14335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557669.1"
                     /translation="MSDFRREALRIAMPWLATAVLLIIWEIACIVFEVPEIILPKPTK
                     IFTVFVARFDILMAYCWDTLWTTVIGFLLAIAGGLLLGLAIGASPFVYSGLYPLLIAF
                     NAIPKVALVPILMIWVGVGSLPAVITAFVISFFPIVVNVATGLATIEPEMRDVLRSLG
                     ATRTEILTKVGIPRAMPYLFASLKVAITLAFIGSVISETVGGNNGIGFLMLSASARND
                     APTTFAGLFAIAIMGVLMYAICALVEKRMTRWAFRGEIVG"
     gene            complement(5030..>5898)
                     /locus_tag="VF991_14340"
     CDS             complement(5030..>5898)
                     /locus_tag="VF991_14340"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9557670.1"
                     /translation="GTGIMQMQARTPACTAMTALTLQALSNNRFLLGIGASGPQVVEG
                     WHGVPFGKPMARTREYIEILRKILKREAPLQHDGELYQIPYKGAGATGLGKPLKSILH
                     GDPHMPIYAASITPIGLRTAGEVADGVLPIFMSPEKAKTVTEPVLAGIARGPAGRSLA
                     QFDIAPYVRISMGADLQACRDALKPELALYIGGMGARTKNFYNDFTRHLGYEEAAAKI
                     QDAYLSGRRAEAIAAVPDALVDGTSLVGSPERIKDRLKAWKEAGRANEVGSMLLSGVT
                     VDSLRVVAEAVL"
BASE COUNT          972 a         1951 c         1912 g         1063 t
ORIGIN      
        1 atgccgctca cccgcacctt accgtcgatc ccatggtggc gggcgccaac atcgtgctgg
       61 cgctgcagac catcgttgcc cgcaacatcg acccgatcga ttccaccgtc gtgacggtcg
      121 gtttcttcaa ggcaggctcg gcctacaacg tcattccggg cgaagtgcat atcggcggca
      181 ccacccgcac cacgacgccg cagaaccgcg ccctggtgaa gcgccgcatc gaagagatct
      241 gccgcggcgc cgagcagatg cacggggtga agatcgagat cgaacacaag ccgggctatc
      301 cgtcgacggt caacaacgtc gagcgcgcgc gctttgccat cgatgtcgcc gccggcgtgt
      361 gcggcgagca tgcggtggcc gacaatgtcc gccccagcat gggcgcggag gatttctcct
      421 acatgctgga gcgtgtgccg ggcgccatgg tttggctggg caatggcggc ggcgccgatg
      481 ccgtcagcct gcacaactca cgctacgact tcaacgacat ggcgattccg ttcggcgtca
      541 gcttcttcgt gcgcaccgtc gagcgcttcc tcggcgacca gcggacctga acaggggacg
      601 gtcggccggg atggagttct ttcgcgtcta cggacgggtg atcgggctct tgcgggccga
      661 gcgcaagctt gcgatcacgc tcgccctcgc caacgtggcg gtggccgccc tgcagttcta
      721 cgagcccgtg ctgttcggca aggtcgtcga tttgctgagc tcggccaagg acaagtccgt
      781 cgacgagctg tggcacggcg cccgcgagct cctcatcctg tgggccgtgg tcggcctggg
      841 cggcattgtc gccaacatcg tggtctccct gcaggccgac cgcatggccc atcgtcgccg
      901 cctgggggcg atggcgaact tcttcgagca cgtgctggtg ctgcccttct cgttccacag
      961 cggccagcac tccggacggc tgatcaaggt catgctgacc ggcgtcgatc atctgttcgg
     1021 catctggctg tcgttcttcc gcgagaatct cgcgaccttc gtcgcgttgt tcatcatgct
     1081 gccgctcagc ctgctgatga actggcggct tggcgtgctg ctggtcgtcc tgatcctgtt
     1141 cttcgcggcc gccaacatct tcgtggtgag tcgcacggac cgccttcaac acgaggtcga
     1201 ggacctgcac agcgagctgg ccagccgcgc cggggatgcg ctgggcaaca tcaatctcat
     1261 ccagagcttc gtgcggctga ccgccgagac cggcgagatg catcgcatca ttggccagac
     1321 attggccgca cagttcccgg tgctgaactg gtgggcgctg ttgtcggtca tgacgcgggc
     1381 ggcttcgacc atcaccgtga tcctgatctt cgtgctcggc acctggctct atacgcaagg
     1441 caaggcgagc gtcggcgaaa tcgtgagctt catgggcttc gccaccatgc tgatcggccg
     1501 catggaccag gcctcgggtt tcgtcagccg cgtcttcttc cagatgccgg cgctggcgga
     1561 tttcttccgt gtcctcgatt cgcaatccgc cgtgccggac aatccgcacg gcaaggatat
     1621 cggccgcgcc aggggcgacg tcgagttcga cgacgtcaac ttctcctatg acggcagacg
     1681 cccggcgctg gtgcatttct cgctgaaggt gccggccgga acgaaggtgg cgctcgtcgg
     1741 accgacaggg gccggcaaga gcacggcact gtcgctgctg caccgcatgt gggatgccca
     1801 gtccggcggc atccgtatcg acggcatcga ccatcgcgag atcaagctgg aatcgctgcg
     1861 ccgcaatatc ggcgtggtgt tccaggacag caccatgttc taccgctcga tcgccgacaa
     1921 cctgcgcatc ggcaagcccg acgccacgca ggccgaactc gaggaggcgg ccggtctcgc
     1981 cgaagcgcac gatttcatca tgcgccagcc gcagggctac gagacgatgg tgggcgagcg
     2041 cggcacgacg ctgttgggcg gcgagcgcca gcggctggcg atcgcccgcg cgctcctgaa
     2101 aaatccgccg atcctgatcc tcgacgaggc gaccagtgcg ctcgattcgg tcaccgaggc
     2161 gcgcatccag aaggcgctca agacgctgat gcagggccgc accaccttcg tcatcgccca
     2221 tcggctgtcg accatccgcg acgtcgacct tgtcgtggtc ttcgagcacg gccggatcgc
     2281 cgagcagggc agctatcggg agctcatgag ccgcggcggc gccttcgccc gtctcgtcgc
     2341 cacccagcag gctggcatag aatctgcctg aatatccccc ttggcggagg gaggctgtcc
     2401 gcctaagagt ggccaacggg gaactcacgg ggggcaggaa agacatgaac aaattcgcca
     2461 agtggctggg cagtgcggcg gcagcggcgg ttgcgctggc cagcctgccc gccaacgcgc
     2521 agaccgcgat caaattcacc ctcgactggg tgttccaggg tccgaccgcg ccgttcctgg
     2581 tggcgctgga gaagggctac tacaaggccg aaggcctcga cgtcaccatg gatcccggcc
     2641 agggctcggc cggggcggtg cagcgcgtgg cgaccggcgc ctaccagatc ggcttcgccg
     2701 acgtgaactc gaccatcgag tacaacgcca agaatcccgg caaggaagtg ctctgcgtct
     2761 tcatggccta cgatttcgcg ccgttcggcg tctatgccct gaagaagagc ggcatcaagg
     2821 ggccgaaggg tctcgagggc aagaagctcg gcgcgccggt gttcgacgcc tcgttccgcc
     2881 tgtttcccgc cttcgccaag ttgaacggca tcaccaagtg ggagcacgtc aacctgacgc
     2941 cgcagctcag ggaacagagc ctggtgcagg gcacggtcga cttcatctcc ggccactatt
     3001 tctcgtcgat gctcgacttg aaggcgcgcg gcgtgaagtt cgatgacgtc gtggccatgc
     3061 gctatgtcga cttcggcatg gacgtctacg gcaacggcat cgtggtctcg cccgagatgg
     3121 ccaaggacga gaaggcggtg aagggcttca tcgccgccac gctcaagggc tggaaggacg
     3181 tgatcgccga caacaagctc ggcatcgccg cggccaagaa gcgcgatccg ctgatcgacg
     3241 aggcgctcga gaccgagcgc ctgcagatct cgctgcagac caacatcctg acgccttacg
     3301 tgaaggccaa cggcatgggc gacgtcgacc cgcagcgttt cgcgcgctcg gtcaagctgg
     3361 tgtcagacgc cttcggcctg ccggcagcgc cggcccccga caaggtgttc accaacaagt
     3421 acctgccgcc caaggccgac aggatggtcg ccaagtagga atgcccttcg tcgatctgaa
     3481 gggcgtcagc ctcacttaca gactcggcaa ggaaacgacc cttgccttgg ccgatgccac
     3541 attcggcatc gacaagggcg agttcatcgc cgtggtcggt ccgtcgggct gcggcaagtc
     3601 gacgatcatg aaactggtca ccggcctgtt gcccgcgtcg agcggcgagg tgcgggtggc
     3661 gggcgagaag gtgaccgggc cggtcaaggg cgtcggcatg gcgttccaga acccgaccct
     3721 gatgccgtgg cgcaccacca tggacaacat cctgctgccc atggaggtcg tcgaaccgca
     3781 caagcgccgc ttccgcagcc atcgcgcaga atacgaggaa cgcgcgatga agctcttggc
     3841 gaccgtgggc ctggccgact tcgcgcggaa attcccgtgg cagctctcgg gcggcatgca
     3901 gcagcgctcc aacctctgcc gcgccctgat ccacgagccg gaactcctga tgctcgacga
     3961 accgttcggc gctctcgacg ccttcacgcg cgaggagctg tggggcgtca tgcaggcgct
     4021 gtggctcgac aagcgcttca ctggcgcgct ggtgacgcac gatctgcgcg aggcggtcta
     4081 tctcgccgac agggtctatg tcatgagccg ccggcccggt cgcatcgtgc tcagccggca
     4141 gatcgacatc ccgcggccgc gcacgcttgc gaccacgttc gagcctcatt tcgtcgagat
     4201 cgtccacgag ctgcgcgacc gcatctcgca ggagcatgcg ccgtgagtga tttcaggcgc
     4261 gaggcgctgc gcattgccat gccgtggctg gccacggccg tgctgctgat catctgggag
     4321 atcgcctgca tcgtcttcga ggtgccggag atcatcctgc ccaagccgac gaagattttc
     4381 acggtgttcg tggcccgctt cgacatcctg atggcgtact gctgggacac gttgtggacg
     4441 accgtgatcg gcttcctgct ggcgatcgcc ggtggcctgt tgctcggcct ggcgattggc
     4501 gcctcgccct tcgtctattc gggcctctat cccttgctga tcgccttcaa cgccattccg
     4561 aaggtggcgc tcgtgccgat cctgatgatc tgggtcggtg tcggttcgct gccggccgtc
     4621 atcaccgcgt tcgtcatcag cttcttcccc atcgtggtca acgtcgccac cggcctcgcc
     4681 accatcgagc ccgagatgcg cgacgtgctg cgcagcctgg gcgcgacgcg caccgagatc
     4741 ctgaccaagg tcggcatccc gcgcgccatg ccctatctct tcgccagcct caaggtggcg
     4801 atcacgctcg ccttcatcgg ctcggtgatc tccgagacgg tgggtggcaa caacggcatc
     4861 ggcttcctga tgctgtcggc cagcgcgcgc aacgacgcgc ccaccacctt cgccggcctg
     4921 ttcgccatcg ccatcatggg cgtgctgatg tacgcgatct gcgcgctcgt cgagaagcgc
     4981 atgacgcgct gggcattccg tggcgagatc gtgggttagt cggccggcgt cagagaaccg
     5041 cctcggcgac gacgcgcagc gagtcgacgg tcacgccgct cagcagcatc gagccgacct
     5101 cgttcgccct gccggcttct ttccaggctt ttaggcgatc cttgatgcgt tccgggctgc
     5161 cgaccagcga ggttccgtcc accagggcgt cgggaaccgc agcgatcgcc tcggcgcgcc
     5221 ggccggagag ataggcatcc tggattttcg cggcggcctc ctcgtagccg aggtgcctgg
     5281 tgaaatcgtt gtagaaattc ttggttcgcg cacccatgcc gccgatgtag agcgcgagct
     5341 cgggcttcag cgcatcgcgg caggcctgca gatcggcacc cattgagatg cggacataag
     5401 gcgcgatgtc gaactgggcg aggctcctgc cggcgggccc gcgggcaatg cccgccagca
     5461 caggctcggt cacggtcttc gccttctccg gcgacatgaa gatcggcagc acgccgtcgg
     5521 ccacctcgcc cgccgtcctg agcccgatcg gcgtgatcga agcggcatag atcggcatgt
     5581 gcggatcgcc gtgcaggatg cttttgagcg gcttgccgag gccggtcgcc ccggctccct
     5641 tgtagggaat ctggtagagc tcgccgtcat gttgaagcgg tgcttcccgc ttcaggatct
     5701 tgcgcaggat ctcgatatat tcgcgggtgc gcgccatcgg cttgccgaac ggcacgccat
     5761 gccagccttc gacaacctgc ggcccggagg cgccgatgcc cagcaggaac cggttgttcg
     5821 acagcgcttg cagggtgagc gccgtcatcg cggtgcaggc cggggtgcgc gcctgcatct
     5881 gcatgatacc ggttccgg
//
LOCUS       DASWGA010000612         4457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_193185, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000612 DASWGA010000000
VERSION     DASWGA010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4457
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193185"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..981
                     /locus_tag="VF991_14345"
     CDS             <1..981
                     /locus_tag="VF991_14345"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9557671.1"
                     /translation="PLPAAAFGATVRLKTPLARQIPGGLPDVLADAGGLLLIPGLQEI
                     ADKPELLVGLSRAFGPEVEDYRYTLTSATSVHAEVPEIFLVSNIAPVNRAPPKRPEPP
                     LTADGRLPVQYPHRKGWHTDQSYRRPPPDISLFYAVTPVARERGQTLFANGTLAYQAL
                     PADLKARVEGLEGLHAQPGTGRSRDAILSGYTPPDQPPQARSQRQPVVRTHPVTGRPA
                     LYLCESGQMDWYDGPFVGLEPGPHGEGAALLDALMTHLTRPEFVYVHEWTVGDVLVWD
                     NRCLVHAATWYDADTEQRMMWRTTVRGNPGAIYAGEARSWVPKELVQDRI"
     gene            complement(961..1692)
                     /locus_tag="VF991_14350"
     CDS             complement(961..1692)
                     /locus_tag="VF991_14350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019994508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEX9557672.1"
                     /translation="MSLVELLDVVKRYGRHTVLNGVSLSVEKGEIIAIIGRSGSGKST
                     LLRCVNGLEPIHGGTVSFDGTVVNDPATDLRKLRQHVGIVFQSFNLFPHLSVEKNITL
                     APKVVKGVPPAEARQLAEAVLRKVGLAEKIDAYPDQLSGGQQQRVAIARSLAMSPQVM
                     LFDEITSALDPELVGEVLKVLEEMARDGMTMMLVTHEIGFARKVADRVVFMHEGRIWE
                     EGPAAATLAQPRTPELETFLNAVLH"
     gene            complement(1679..2329)
                     /locus_tag="VF991_14355"
     CDS             complement(1679..2329)
                     /locus_tag="VF991_14355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX9557673.1"
                     /translation="MIRELSFIDVLYLIAATRWTLALTAIAFAGGGLVGLAVALLRVS
                     GLAPLRWLGGLYVLVVQGTPLLAWLFVFFFGFSIFGITVSPWIAAAASYSIYAGAFLG
                     EIWRGCLQAIPRTQWEAGASLGLGFTQQLRYIIVPQALRLAIPPTVGFLVQLIKNTSL
                     AAVIGFIELTREGQLTTATTFRPFTVYLIVAAIYFALCFPLTQVSRRLERRLHVAR"
     gene            complement(2326..2988)
                     /locus_tag="VF991_14360"
     CDS             complement(2326..2988)
                     /locus_tag="VF991_14360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX9557674.1"
                     /translation="MTYSFQFRDVFAAWEFLLDGLVLTLELSLFTMVVGLVIGVAGAA
                     ARVYGRPWLSRPVAVYVEAIRNTPLIVQLFLIFFGLPSAGIKFDADTAAFIALSINLG
                     AYSIEIIRAGLEAIPRSQIEAGQSLGLSGLQIFRYVIVFPALKTMYPALASQFVLLML
                     ATSVVSQISAQDLFHMASIIQSRTFRDFEVYVVVAAAYLALAMIFRLLFAGLYQLVFA
                     RR"
     gene            complement(3172..4077)
                     /locus_tag="VF991_14365"
     CDS             complement(3172..4077)
                     /locus_tag="VF991_14365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012653692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557675.1"
                     /translation="MTRVASPGRLLWMRFLRHRLAQASLVFLVILLALSLAAPLIADL
                     RGVDPTMTDLFRRLEAPSAEHWLGTDDLGRDLFQRLLDGGRVSLLVGISGALLSGILG
                     AVIGVVAGYLGGRLDSFLMRFTDGVISLPLLPLLIVLAAIDPRKIGVPAEVAQSETFS
                     LYRIVIIVALTGWTTAARLVRAETLSLKARDFTRAAQALGARPERIMFRHILPNAAGS
                     LVVATTLSIGTLILLESTLSFLGLGTQPPAASWGNMLTGAQELLQQAPVLALWPGLLI
                     FLTVIAFNFVGDGLQDALDPRSERR"
     gene            complement(4074..>4457)
                     /locus_tag="VF991_14370"
     CDS             complement(4074..>4457)
                     /locus_tag="VF991_14370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007763431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557676.1"
                     /translation="VQLGTYTRFMRGAMIETLRQDYVRTARAKGAPESRVLWGHAFRN
                     ALAPVLTILALSFGALFSGALITETMFAWPGMGKAIYQAILENDYNLALVGLLIATFT
                     TIAGNLLADLAYAWLDPRVSIAGNV"
BASE COUNT          813 a         1456 c         1568 g          620 t
ORIGIN      
        1 cctttgcccg ccgccgcgtt cggcgcgacg gtgcggctca aaacgccgct cgcgcggcaa
       61 attcccggtg gattgcccga tgtcctggcc gacgccggcg gcctgctgct gatccccggc
      121 ctgcaggaga tcgcggacaa gcccgagctg ctggtcggcc tcagccgcgc cttcgggccg
      181 gaggtcgagg attatcgcta caccctgacc agcgcgacct cggtgcatgc cgaggtgccg
      241 gagatcttcc tggtctccaa catcgcgccg gtgaacaggg cgccaccgaa gcggccggag
      301 ccgccgctca ccgccgacgg ccgcctgccg gtgcagtatc cgcatcgcaa gggctggcac
      361 accgaccaga gctatcgccg gccgccgccc gacatctccc tgttctatgc cgtgacgccg
      421 gtggcgcgcg agcgcggcca gacgctgttc gccaacggca cgctcgccta ccaggcattg
      481 ccggccgatc tcaaggccag ggtcgagggg ctggaaggct tgcacgccca gcccggcacc
      541 ggccgctcgc gcgacgccat cctgtcgggc tacacgccgc ccgaccagcc gccgcaggcg
      601 cgctcgcagc gccagccggt ggtgcgcacc catccggtga ctggccggcc ggcgctctat
      661 ctctgcgaat cgggccagat ggactggtat gacggcccgt tcgtcggcct cgagcccggt
      721 ccgcacggcg agggcgcggc gctactcgac gcgctgatga cgcacctgac gcggcctgag
      781 ttcgtctatg tccacgagtg gaccgtgggc gacgttttgg tgtgggacaa tcgctgcctg
      841 gtccacgccg cgacctggta cgacgccgac accgagcagc gcatgatgtg gcgcaccacg
      901 gtgcgcggca atccgggcgc gatctacgcc ggcgaggcgc ggagttgggt gccgaaggag
      961 ctagtgcaag accgcattta aaaacgtctc cagttccggc gtgcgcggct gggccagcgt
     1021 cgcggcggcg gggccttcct cccagatcct gccttcgtgc atgaacacga cgcggtcggc
     1081 gaccttgcgg gcaaagccga tctcgtgcgt caccagcatc atggtcatgc cgtcgcgcgc
     1141 catttcctcc agcaccttca gcacctcacc gaccagctcg gggtcgagcg ccgaggtgat
     1201 ctcgtcgaac agcatcacct gcggcgacat ggcgagcgag cgggcgatcg ccacgcgctg
     1261 ctgctggccg ccggagagct ggtcgggata ggcgtcgatc ttctcggcca ggccgacctt
     1321 gcgcagcacc gcctcggcga gctggcgcgc ctcggccggc ggcaccccct tcacgacttt
     1381 gggcgcgagc gtgatgttct tctcgacgct gagatgcggg aagaggttaa aactctggaa
     1441 cacgatgccg acatgctggc gcagcttgcg caggtcggtg gcgggatcgt tcaccacggt
     1501 gccgtcgaac gacacggtgc cgccgtggat cggctccagg ccgttgacgc agcgcaacag
     1561 ggtgctcttg cccgagccgg agcggccgat gatggcgatg atctcgcctt tctcgacgct
     1621 cagcgacacg ccgttcagca cggtgtgccg gccgtagcgc ttgacgacgt ctaaaagttc
     1681 aacgagcgac atggagcctc cgctcgagcc gccgggacac ttgcgtcagc gggaagcaga
     1741 gcgcgaagta gatggcggcg acgatcaggt acacggtgaa gggacggaag gtggtggcgg
     1801 tggtgagctg gccctcgcgg gtgagttcta tgaagccgat cacggcggcg agcgaggtgt
     1861 tcttgatgag ctggaccagg aagccgacgg tcggcggaat ggcgagccgc agcgcctgcg
     1921 gcacgatgat gtagcgcagc tgctgggtga agcctaggcc gagcgaggcg ccggcttccc
     1981 actgggtgcg cgggatggct tgtaggcagc cgcgccagat ctcgcccaaa aaggcgccgg
     2041 catagatcga gtaggaggcg gcggcggcga tccacggcga gacggtgatg ccgaagatcg
     2101 agaagccgaa gaagaacacg aacagccagg cgagcagcgg cgtgccctgc acgaccagga
     2161 catagaggcc gcccagccag cgcagcggcg ccagccccga gacgcgcagc agcgcgaccg
     2221 ccaggccgac caggccgccg ccggcgaagg cgatggcggt gagcgccagc gtccagcgcg
     2281 tggccgcgat caggtagagc acgtcgatga aggacagctc gcggatcatc ggcgggcgaa
     2341 cacgagctgg tagaggccgg cgaacagcag gcggaagatc atggccagcg ccagataggc
     2401 cgcggccacg acgacataga cttcgaagtc gcggaaggtg cgcgactgga tgatcgaggc
     2461 catgtggaat aggtcctgcg ccgaaatctg cgagaccacg ctggtggcca gcatcagcag
     2521 cacgaactgg ctggcgagcg ccggatacat cgtcttgagc gccggaaaga cgatgacgta
     2581 gcggaagatt tgcaggcccg agagaccgag cgactggccg gcctcgatct gcgagcgcgg
     2641 gatcgcctcc agcccggcgc ggatgatttc gatggaatag gcgccgagat tgatcgacag
     2701 cgcaatgaac gccgcggtgt cggcgtcgaa cttgatgccg gcgctgggca ggccgaagaa
     2761 gatcaggaag agctggacga tcagcggcgt gttgcggatc gcctcgacat agaccgcaac
     2821 cggccggctg agccaaggcc ggccgtagac ccgcgccgcg gcgccggcga cgccgatcac
     2881 caggccgacc accatggtga acagcgaaag ctcgagggtc agcaccaggc cgtcgagcag
     2941 gaactcccac gcggcgaaga cgtcgcggaa ctggaaactg tacgtcatac gccgctgatc
     3001 atttccccgt ccgcgagtct aaagcatgtc ccatcgcatt ggaaacgttc tggggccaag
     3061 tggtctttgt catcgcgcgc ggggtagtcc ccgcgctgaa gcgtagcgaa ggatctcatg
     3121 ccgattgcaa gcggcgatga ggtccttcgc tgcgctcagg acgaccgact atcatcttct
     3181 ctcgctgcgc ggatcgagcg cgtcctgcag gccgtcgccg acgaaattga aggcgatcac
     3241 ggtgaggaag atcagcaggc cgggccacag cgccagcacc ggcgcctgct gcagcagctc
     3301 ctgcgcgccg gtcagcatgt tgccccagct cgcggccggc ggctgggtgc ccagcccgag
     3361 gaaggacagc gtcgattcga gcaggatcaa ggtgccgatc gacaaggtgg tggcgacgac
     3421 cagcgagccc gccgcgttgg gcaggatgtg gcggaacatg atgcgctcgg gccgcgctcc
     3481 cagcgcctgc gccgcgcggg tgaaatcgcg cgccttgagc gacagcgtct cggcccgcac
     3541 cagccgcgcc gccgtcgtcc agccggtcag cgccacgatg atgacgatgc ggtagagcga
     3601 gaaggtctcc gactgggcga cctcggccgg cacgccgatc tttcgcgggt cgatggcggc
     3661 cagcacgatc aacagcggca acagcggcag cgagatcacg ccgtcggtga agcgcatcag
     3721 gaaactgtcc agccggccgc cgagatagcc cgcgacgaca ccgatcacgg cgcccaggat
     3781 ccccgacagg agcgcgccgg agataccgac cagcagcgac acccgtccgc cgtcgagcag
     3841 tcgctggaaa agatcgcggc cgaggtcgtc ggtgcccagc cagtgctcgg ccgatggcgc
     3901 ctcgaggcgg cggaaaaggt cggtcatggt gggatcgacg ccgcgcagat cggcgatcag
     3961 gggtgccgcc agcgacagcg cgagcaggat gaccaggaac accagcgacg cctgcgccag
     4021 ccggtgacgc aggaagcgca tccacagcag gcggccggga ctcgcaaccc tcgtcatacg
     4081 ttcccggcga tcgacacgcg cgggtcgagc caggcatagg cgaggtcggc caaaaggttg
     4141 ccggcgatgg tggtgaaggt cgcgatcaag agcccgacca gagcgaggtt gtagtcgttc
     4201 tcgaggatcg cctggtagat cgccttgccc atgcccggcc aggcgaacat cgtctcggtg
     4261 atcagcgcgc ctgagaacaa ggcgccgaag gagagcgcca ggatggtgag caccggcgcc
     4321 agcgcattgc ggaaggcgtg gccccacagc acgcggctct ccggcgcgcc cttggcgcgc
     4381 gccgtgcgca catagtcctg gcgcagcgtt tcgatcatcg caccgcgcat gaagcgcgtg
     4441 taggtgccga gctggac
//
LOCUS       DASWGA010000613         1587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1971197, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000613 DASWGA010000000
VERSION     DASWGA010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1971197"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1142
                     /locus_tag="VF991_14375"
     CDS             <1..1142
                     /locus_tag="VF991_14375"
                     /inference="COORDINATES: protein motif:HMM:NF012323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VWD domain-containing protein"
                     /protein_id="HEX9557677.1"
                     /translation="ALASIDNEGSIAASGGNLLLYGGVGGTGTLSVASGATMTLQAAV
                     GAGQRLAFSPNARAVLNDPRAFAGTISGFGSGDVLDVAGTEAASPTWSDGVLTLDTAF
                     GAIRLNFAGAYASNAFTVQADGHGGTYVLAGGNGDVHMTTFDGLYYDFQAVGDFVAVR
                     STDAGNPWQIQIRTESFPGATSITTGLAATLGYDCVSFAVGRANPVYIDGAPDTALHE
                     GDVQSLAGGTLTQLSAAAYRLAWNTGESVTVTYQDGYMDWTVALGPHDGPGSVQGLLG
                     SHSGQATDFQLPDGSVLRQPLSNDEILGAFADAWRVAPGTSLLDDSGPAVPMAAFSPL
                     LLQYMSVMGADAGAPVPTGTTLQGAVSSSAGDLAAAFTPSSAFHA"
     gene            complement(1230..>1587)
                     /locus_tag="VF991_14380"
     CDS             complement(1230..>1587)
                     /locus_tag="VF991_14380"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9557678.1"
                     /translation="MPTAFRPAQQGSLRALAVTSAQRTKAMPEVPTLLEAMPSGFALD
                     AWLALAAPVGTPTEIVTRLYGVLVESLKDPAFRSALDSDGSEVVFNSPAEFAALLQSE
                     AAKWQALITRVGVKLE"
BASE COUNT          228 a          571 c          525 g          263 t
ORIGIN      
        1 tggcgctcgc cagcatcgac aacgagggct cgatcgcggc cagcggcggc aacctgctgc
       61 tctacggcgg cgtcgggggc acaggcacgc tctcggtcgc gtcaggggcg acaatgacct
      121 tgcaggcggc cgtcggtgcc ggccaaaggc ttgccttcag tccgaatgcg cgggccgtgc
      181 tcaatgatcc gcgcgcgttc gcgggcacga tttccggctt cggctccggt gacgtgctgg
      241 atgtcgcagg cacggaggcg gccagcccga cctggtccga cggcgtgctg acgctcgaca
      301 ccgccttcgg tgccattcga ctgaacttcg ccggagccta cgcgtcgaac gcctttaccg
      361 ttcaggcaga cggccacggc ggaacctatg tcctggccgg cggcaacggc gacgtccata
      421 tgaccacctt cgacggcctg tactatgatt ttcaggccgt cggcgacttc gtcgccgtcc
      481 gatcgaccga cgccggcaat ccctggcaga tccagatccg gaccgagtca ttcccgggcg
      541 ccaccagcat cacgaccggg cttgccgcga cgctcggcta tgactgcgtg agcttcgccg
      601 tcggtcgggc caatcccgtc tatatcgacg gcgcgccgga cacggcgctg cacgagggtg
      661 acgtgcagag cctcgcgggc ggcacgctca cccagctctc cgccgccgcc tatcggctgg
      721 cctggaacac cggcgagtcc gtcaccgtca cctatcagga cggctatatg gactggacgg
      781 tcgcgctcgg accccatgac gggcccggct cggtgcaggg tctgctcggc agccacagcg
      841 gtcaggccac cgatttccag ctgccggacg gctctgtcct tcgccagccg ctcagcaacg
      901 acgagatcct cggcgccttc gccgatgcct ggcgcgtggc gccgggcacc tcgcttttgg
      961 atgactcagg gcccgccgtg cctatggcgg cattctcgcc cctattgctg caatacatgt
     1021 ccgtgatggg cgccgacgcc ggagcaccag tcccgaccgg cacgacgctt cagggtgcgg
     1081 tttcctcctc cgccggcgac ctcgccgcgg ctttcacccc gagctctgcc ttccacgcct
     1141 gacgccggcg gctggcggcc ggcccatctc cttggtgaag cggtcgctga aagtgccgcg
     1201 ccggtcggac gcattcaacc ggccccgagc tattcgagct tcacgcccac ccgcgtgatg
     1261 agggcctgcc atttggccgc ctcgctttgc agcagggcgg cgaactcggc cggactgttg
     1321 aacacgacct ccgagccatc gctgtcgagg gcgctgcgaa acgccgggtc cttcaggctc
     1381 tcgaccagga cgccgtagag gcgcgtcacg atctctgttg gtgtgccgac cggcgcggcc
     1441 agggcgagcc aggcgtcgag cgcgaagccc gagggcatcg cctccagcaa ggtcggcacc
     1501 tcgggcatcg ccttggtgcg ttgggcgctg gtcaccgcca gcgcccgcaa gctgccctgc
     1561 tgggccgggc ggaaggcggt cggcatg
//
LOCUS       DASWGA010000614         3821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_194017, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000614 DASWGA010000000
VERSION     DASWGA010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3821
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194017"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..128
                     /locus_tag="VF991_14385"
     CDS             <1..128
                     /locus_tag="VF991_14385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013892653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphate ABC transporter permease PtsA"
                     /protein_id="HEX9557679.1"
                     /translation="FALSPYEEWQKLAWTGALLITVTVLALSIIARSLTSARKSQ"
     gene            125..955
                     /gene="pstB"
                     /locus_tag="VF991_14390"
     CDS             125..955
                     /gene="pstB"
                     /locus_tag="VF991_14390"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEX9557680.1"
                     /translation="MSMASAAGPAVAVPVAAHAGVDTRGLPEKIAIRNLEFFYGDSRA
                     LKGISLSLYANKTTAFIGPSGCGKSTLLRVLNRMYDLYPGQRATGEVLFDGDNLLSDS
                     QDINLLRARVGMVFQKPTPFPMTIYENIAFGIRLYERLSRSEVDGRVEEALRRAALWD
                     EVKDKLAANSQSLSGGQQQRLCIARTVAVKPEVILFDEPCSALDPISTAKIEELIDEL
                     KQDYTIVIVTHNMQQAARVSDFTAFMYLGELIEFGATETLFTTPSDSRTQAYITGRFG
                     "
     gene            969..1679
                     /gene="phoU"
                     /locus_tag="VF991_14395"
     CDS             969..1679
                     /gene="phoU"
                     /locus_tag="VF991_14395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007557668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEX9557681.1"
                     /translation="MAEHTLKRFDEELERLSATISEMGGLAESQFAQSLVALRERDTE
                     VAERVIADDARVDALDLAVQEQTVKLLALRQPMAVDLRVILSSIKIAAALERIADYAK
                     NTAKRSIILAQGSAPASAVTGIDRLGRLVRTALKDVLDAFAHGDVAKAHDVWQRDEEI
                     DQVYTGLFRELLTYMMEDPRTITACTHLLFMAKNIERAGDHVTNIAELVSFRTTGHGF
                     DEARPKGSASLYAAGNTP"
     gene            1727..2419
                     /gene="phoB"
                     /locus_tag="VF991_14400"
     CDS             1727..2419
                     /gene="phoB"
                     /locus_tag="VF991_14400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HEX9557682.1"
                     /translation="MKPRVLIVEDETALVELLRYNLEQSGFRVSVAYDGEEALASVQE
                     DVPDLILLDWMLPLMSGIEVCRQLRRQTPTANLPIIMLTARGEEGDRVRGLDAGADDY
                     VSKPFSPTELVARIRAVLRRIRPALADEALSYSDLVMDLVAHRVTRAGKPIHLGPTEF
                     RLLRHFVEHPGRVFSREQLLDAVWGKDVYVEARTVDVHIRRLRIALNGDQHADLIRTV
                     RAAGYALDATPS"
     gene            complement(2569..>3821)
                     /locus_tag="VF991_14405"
     CDS             complement(2569..>3821)
                     /locus_tag="VF991_14405"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557683.1"
                     /translation="YSIKFVWSPVVDRVPLPYLTRRLGRRRSWMLLAQTGIGLGLLAM
                     SFCDPRADLWWLAVFAVIVAFSSATQDIALDAFRIEATDESLQGATAATYQLGYRIAV
                     LAAGAGALYIAEFGSWPIAYVTMSVLALVGITTTLLIAEPEKRVAAGTVEREGKIAAF
                     ASRNARLPPALRDALVWIYGAIVCPFVDFFARFGWLALVLLAFIGLFRLSDIAMGVMA
                     NPFYIDMGFSLQQIANVTKIYGFVMSILGALLGGALVFRLGASRLLAPSVFLIAASNL
                     TFSWLAIIGRPDPLVLAAAISIDNLASGMAGSVFIAFLSGLTNTAYTATQYALFSSIM
                     TLPGKVIGGFSGLVVDWLQTSARDVPAFAALLDAVAASPKFGGYAIFFAYTALLGVPA
                     LILAVIVRRQFEKETPPSAKKEGQ"
BASE COUNT          690 a         1305 c         1261 g          565 t
ORIGIN      
        1 agttcgcgct gtcgccctac gaggagtggc agaagcttgc ctggaccggc gcgctgctca
       61 tcaccgtcac ggtgctggcg ctcagcatca tcgcccgatc cctcacctca gccaggaagt
      121 cacaatgagc atggcatccg cagccggacc cgccgtcgcc gttcccgtcg ccgcccacgc
      181 cggcgtcgac accaggggcc tgccggagaa gatcgcgatc cgcaatctcg aattcttcta
      241 cggcgattcg cgcgcgctca agggcatcag cctgtcgctt tacgccaaca agacgacagc
      301 cttcatcggc ccgtcgggct gcggcaagtc gaccctgctg cgcgtgctca accgcatgta
      361 cgacctctat cccggccagc gcgccaccgg cgaggtgctg ttcgacggcg acaacctcct
      421 gagcgacagc caggacatca acctgttgcg cgcccgggtc ggcatggtgt tccagaagcc
      481 gacgccgttt ccaatgacga tctacgagaa catcgccttc ggcatccggc tctatgagcg
      541 cctgtcgcgc tccgaagtcg acggccgggt cgaggaggcg ctgcggcgcg ccgcgctgtg
      601 ggacgaggtc aaggacaagc tcgccgccaa cagccagagc ctgtcgggcg gccagcagca
      661 gcgtctgtgc atcgcccgca ccgtggcggt gaagccggaa gtgatcctgt tcgacgagcc
      721 gtgctcggcg ctcgatccga tctcgaccgc caagatcgag gagctgatcg acgaattgaa
      781 gcaggactac acgatcgtca tcgtcaccca caacatgcag caggcggcgc gcgtctcgga
      841 cttcaccgcc ttcatgtatc tcggcgagct gatcgagttc ggcgccaccg agacgctgtt
      901 caccaccccc agcgacagcc gcacccaggc ctacatcacc ggccgcttcg gctgacacgg
      961 agaagaacat ggccgaacat accctcaagc gcttcgacga ggagctcgag cggctcagcg
     1021 ccacgatcag cgagatgggc ggcctggccg agagccagtt cgcccagtcg ctggtggcgc
     1081 tgcgcgagcg cgataccgag gtcgccgagc gggtgatcgc cgacgacgcc cgcgtcgatg
     1141 ccctcgatct tgccgtccag gagcagaccg tgaagctgct cgccttgcgc cagccgatgg
     1201 cggtcgatct cagggtcatc ctgtcgtcga tcaagatcgc cgccgcgctg gagcgcatcg
     1261 ccgactatgc caagaacacc gccaagcgca gcatcatcct ggcccagggc tcggcgccgg
     1321 cctcggcggt gaccggcatc gaccggctgg gccggctggt gcgcaccgcg ctcaaggacg
     1381 tgctcgatgc tttcgctcat ggcgacgtcg ccaaggcgca cgatgtctgg cagcgcgacg
     1441 aggaaatcga ccaggtctat accggcctgt tccgcgagtt gctgacctac atgatggagg
     1501 atccgcgcac catcaccgcc tgcacgcatc tgttgttcat ggccaagaac atcgagcgcg
     1561 ccggcgacca cgtcaccaac atcgccgagc tggtgagctt ccgcacgacg ggtcacggct
     1621 tcgacgaggc gcgacccaaa ggcagcgcct cgctctatgc cgcgggcaac acgccatgag
     1681 cgtggccggc acgacgaccg cgcggcgcga cacccagacc tcgtcgatga agccgcgcgt
     1741 gctgatcgtc gaggacgaga cggcgctggt cgagctgctg cgctacaacc tcgagcagtc
     1801 gggctttcgc gtctcggtcg cctatgacgg cgaggaggcg ctggcctcgg tgcaggagga
     1861 cgtgccggat ctcatcctgc tcgactggat gctgcccttg atgtcgggca tcgaggtctg
     1921 ccgccagctg cgccgccaga cgccgaccgc caacctgccg atcatcatgc tgacggcgcg
     1981 cggcgaggag ggcgatcgcg tgcgcggcct cgatgccggc gccgacgact acgtctccaa
     2041 gccgttctcg ccgaccgagc tggtggcgcg catccgcgcc gtgctgcgcc gcatccgtcc
     2101 ggcgctcgcc gacgaggcgc tgtcctactc ggacctcgtc atggatctgg tggcgcaccg
     2161 cgtgacacgg gccggcaagc cgatccatct cgggccgacc gagttccgcc tgctgcgcca
     2221 cttcgtggag catcccggcc gcgtcttctc gcgcgagcag ctcctggacg cggtgtgggg
     2281 caaggacgtc tatgtcgagg cgcgcaccgt cgacgtgcac atccgccgcc tgcgcatcgc
     2341 gctcaatggc gaccagcacg ccgacctgat ccgcaccgtc cgggcggccg gttacgccct
     2401 ggacgccacg ccgagctgac aaatataacg aatgaggttt tccacattgc cagtcacggt
     2461 tttgtagctt cgcccggcta cacccaaaat gctcgttccg gctggcaccc cacgccccgc
     2521 ttcggaatga gccggttccc ccggcgcgga cgacaccccg tcgccgattt actgcccctc
     2581 cttcttcgcg gaaggagggg tttctttttc gaactgccgg cgaacgatca ccgccaggat
     2641 cagcgccggc acgccgagca gggcggtgta ggcgaagaag atcgcatagc cgccaaactt
     2701 gggcgaagcc gccaccgcgt cgagcaaagc ggcgaatgcc ggcacatcgc gcgccgatgt
     2761 ctgcagccag tcgacgacga ggccggagaa gccgccgatc accttgcccg gcagggtcat
     2821 gatcgagctg aacagggcat attgcgtggc cgtgtaggcg gtgttggtga ggccggagag
     2881 aaaggcgatg aacaccgaac cggccatgcc gctcgccaga ttgtcgatgc tgatcgccgc
     2941 cgccagcacc agcgggtcgg gccggccgat gatggcgagc caggagaagg tgaggttcga
     3001 ggcagcgatc aggaacaccg acggcgcgag caggcgcgac gcgcccagcc ggaagaccag
     3061 cgcgccgccc agcagggcgc ccaggatcga catgacgaag ccgtagatct tggtgacgtt
     3121 ggcgatctgc tgcaggctga atcccatgtc gatgtagaag gggttggcca tcacccccat
     3181 ggcgatgtcg ctgaggcgaa acaggccgat gaaggccagc agcaccaggg caagccagcc
     3241 gaagcgggcg aagaaatcga cgaacgggca gacgatggcg ccgtagatcc acaccagcgc
     3301 gtcgcgcagc gcgggcggca ggcgggcgtt gcggctggcg aacgcggcga tcttgccttc
     3361 gcgctcgacg gtgcccgcgg ccacccgctt ttccggctcg gcgatcagca gcgtcgtcgt
     3421 gatgccgacc agcgccagca ccgacatggt gacataggcg attggccacg agccgaactc
     3481 ggcgatgtag agcgcgccgg cgccggccgc gagcacggcg atgcgatagc cgagctggta
     3541 ggtcgccgcg gtggcgccct gcaggctctc gtcggtcgcc tcgatacgga aggcgtcgag
     3601 cgcgatgtcc tgcgtcgccg aggagaaggc gacgataacg gcgaacaccg cgagccacca
     3661 caggtcggcg cgcggatcgc agaacgacat ggcgagcagg ccgagcccga tgccggtttg
     3721 ggccaaaagc atccaggaac gccggcggcc cagcctgcgc gtgaggtagg gcagcggcac
     3781 gcggtcgacc accggcgacc acacgaactt gatggagtag g
//
LOCUS       DASWGA010000615         9211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1595087, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000615 DASWGA010000000
VERSION     DASWGA010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9211
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1595087"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1185)
                     /locus_tag="VF991_14410"
     CDS             complement(<1..1185)
                     /locus_tag="VF991_14410"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX9557684.1"
                     /translation="MKVSFVLNGQAAAWSGPPVTRLASALRDDLGLTGTKVGCDAGDC
                     GACTVLLDGRQICSCLVAIGQVEGRRIETVEGLSNGDGALAGLQKSFLAHGAAQCGIC
                     TPGMLMAAEELLRQTSQPSRAEVEDALGGVLCRCTGYGKIVDAVMAAATPPPVVAPAA
                     GAAVGARVARVDGTAKVTGRDVFGADGIPADALWIRVVRSPHARARFELGDLAPLRRR
                     LAAVLTAADVPFNGFGIYPDIKDQPVLADGQVRYRGEAVVALVGDRDTVRAIRDGEVP
                     IAWTPEPPLFGIDAATAADAPLVQADKPKNLLLDGGVRRGNADEAFATCAAVAEGVFE
                     TAFVEHAYIEPEADWAERVGDRLELHVSTQTPYMNRDEVANVMRLRPEAVRIVPTACG
                     GGF"
     gene            complement(1182..2012)
                     /locus_tag="VF991_14415"
     CDS             complement(1182..2012)
                     /locus_tag="VF991_14415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEX9557685.1"
                     /translation="MAVYLRPRYLEEALAALARPHTVLAGGTDFYPARVGRAIDEDVL
                     DISGIAALRGITVDDSGWRLGATTTWSELIEADLPPLFDGLKQAAREVGGRQIQNAGT
                     LAGNLCNASPAADGVPCLLTLDAEVEIAGPAGRRLLPLRQFITGTRRTALAPGEIAVA
                     IHVPRPRHPARGAFLKLGARRYLVISIAMAAAVLEIADAKVASARVAIGACSPVSERL
                     PELETALLGAPVDRHLADCVDASQLSPLSPIDDVRGSAFYRQDAVVTLLRRLLVGFAS
                     "
     gene            complement(2108..2488)
                     /locus_tag="VF991_14420"
     CDS             complement(2108..2488)
                     /locus_tag="VF991_14420"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEX9557686.1"
                     /translation="MLRRAHQRASAIFQVSIGDPNITPTQYSSMVKLNEYTELSQNLL
                     GRLVGMDKATMQGVVRRLKERRLVDSRPDPGDARRTLLSLTTEGQRLVNKLLINGPAV
                     SRETLKPLNTQEQRHLLELLSKIV"
     gene            2825..4024
                     /locus_tag="VF991_14425"
     CDS             2825..4024
                     /locus_tag="VF991_14425"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9557687.1"
                     /translation="MPGALEGIRIVDLTNIILGPYGTMLLADQGADVIKVEAPEGDAV
                     RHIGEPAKTAGMGPTYLYVNRNKRSLCLDLKNQAARAALLKVVAGADAFVHALRPQAI
                     EGLGLGYEAIRKIKPDIVYVGAYGYSADGPYGKLPAYDDAIQARFGIADLMGRAAGDD
                     VPRYPPTIIADKTVGLTFAFATLSALMHRQRTGEGQFVEVPMFETMAAWLMVEHLWER
                     TFSDDGEVGYSRLLARTRKPYRTLDGWMAILPYNDKHWRNFFEIVGRPEVLEDRRYST
                     LNARSLHIDDMYAMVEALAPTRTTAAWVKLLDQAQIPNAPVSRPADLFEDPHLVWRQL
                     FKKYSHPSEGEIMMVEPPMRMSRTPPAIRSLAPLQGAHSRAVLAEAGVSEAEIAALKQ
                     AGALIEP"
     gene            complement(4011..4988)
                     /locus_tag="VF991_14430"
     CDS             complement(4011..4988)
                     /locus_tag="VF991_14430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014766549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HEX9557688.1"
                     /translation="MRVLSAAEVDAALDDLALIDRLEALFRTGCEMPPRHHHTLTEPA
                     GAGSANATLLLMPAWTRGAESRLGIKLVTVFPDNGKRGLPSIYGQYLLLDGATGAPLA
                     LLDGTMLTKRRTACASGLASRYLSQRDSRRLLMIGTGALAPQLIRVHAKVRPIDEVAI
                     WGRRPEQAQGLARELAASLPRALGRSLSVRAVFDRREAVAAADIISCATLSKTPLVEG
                     DWLRQGQHLDLVGAYTPEMRESDDGAVGRAQVYVDTRAGALKEAGDIVQPLANGTIDV
                     DDVVGDLFELARGERSGRRTGDATTITLFKSVGAALEDLAAAQLAITVR"
     gene            complement(4985..5389)
                     /locus_tag="VF991_14435"
     CDS             complement(4985..5389)
                     /locus_tag="VF991_14435"
                     /inference="COORDINATES: protein motif:HMM:NF018058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapA
                     domain-containing protein"
                     /protein_id="HEX9557689.1"
                     /translation="MKILSRALFLLFVLVGVLIAVSNSQPVQLALWPLPQQIVMPLYL
                     LVVLLLLLGVLAGLGLGWWAGRRHRRRAREASGEAARLEREVQRLRETTAAASPPPIR
                     SGPAPREQKAIERQSALVAPELSSSGARGPFS"
     gene            complement(5436..5768)
                     /locus_tag="VF991_14440"
     CDS             complement(5436..5768)
                     /locus_tag="VF991_14440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEX9557690.1"
                     /translation="MTKSELIARLAARNPHLYQRDVERIVATVFDEISKALAGGHRVE
                     LRGFGAFSVKKREPRTGRNPRTGEQVAVASKRVPYFKTGKDLRDRLNKEAARAAGLAP
                     AEPAGDKK"
     gene            complement(5880..7613)
                     /gene="rpsA"
                     /locus_tag="VF991_14445"
     CDS             complement(5880..7613)
                     /gene="rpsA"
                     /locus_tag="VF991_14445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEX9557691.1"
                     /translation="MPKGSALRKPANDTSSSEFAALLDESLGGSTSFEGSVVKGTVVR
                     IANDFVTIDVGLKSEGRVALREFANGMGAPEVKEGDVVDIFVDRMENKEGEAVLSRDK
                     ARREEAWTQLEKAFNDQERVMGTIFGRVKGGFTVDLSGAVAFLPGSQVDVRPVRDVGP
                     LMGQAQQFAILKMDRRRGNIVVSRRAVMEETRAEDRTRLMGALSEGQVLDGVVKNITD
                     YGAFVDLGGVDGLLHVTDIAWKRINHPSEALTIGQQVKVQVIRFNPETQRISLGMKQL
                     MSDPWDGAGAKYPVGLKLKGRVTNITDYGAFVELEPGVEGLVHVSEMSWTKKNVHPGK
                     IVSTSQEVEVMVLDVDMSKRRISLGLKQCMANPWESFAEKYPAGTELEGEVRNITEFG
                     LFVGLPGDIDGMVHLSDLSWDKAGDEAIRDYKKGDQVKVKVLDVDIDKERISLGIKQL
                     ANDPFEKVGSVAKKGDVVTVIVAGIQDNGIDVTVQDGIPGFIRKSELSRDRSEQRPDR
                     YAIGDKLDAKITNIDKASRRVVLSVKARELDEEKKAMADFGSSDSGASLGDILGAALS
                     KAQKKGEEEAK"
     gene            complement(7770..8390)
                     /locus_tag="VF991_14450"
     CDS             complement(7770..8390)
                     /locus_tag="VF991_14450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEX9557692.1"
                     /translation="MIIAIDGPSASGKGTLATRLAAHFGLPHLDTGLLYRAVGWAAER
                     TGEPAASVAAALRARDLDNPDLRTDQAGQAGSRVAAIPEVRANLLNFQKKFAYQPSGA
                     VLDGRDIGTVICPDATVKFFVTASLQARAERRYRELRERGVDTIRPRVLAEMAERDRR
                     DSERAAAPLKAAPDAYLLDTSDMDADAAFAAALAFIASKGFRSAGP"
     gene            complement(8399..>9211)
                     /locus_tag="VF991_14455"
     CDS             complement(8399..>9211)
                     /locus_tag="VF991_14455"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEX9557693.1"
                     /translation="KSAILLAGLNTAGETTVIEPEATRDHTERMLRHFGAEVRVTAAE
                     DRGKRITVVGWPELTGRDIVVPGDPSSAAFAVVAAAIRPGSDVTVENVGLNPLRAGLY
                     QTLREMGADIALENARDVGGEPVADLRVKGGGLEGIEVPAERAPSMIDEYPILAVAAS
                     CAKGTTRMLGLAELRAKESDRLASVAAGLQANGVKHEIGADTLVVHGSGAPPPGGGLV
                     ATHLDHRIAMSFLVLGLAARQPVAVDDGSPIDTSFPGFAALMNSLGAKIEAA"
BASE COUNT         1479 a         3139 c         3079 g         1514 t
ORIGIN      
        1 gaagccgccg ccgcaagcgg tcggcactat gcgcaccgcc tcgggcctga gccgcatcac
       61 gttcgcgact tcgtcacgat tcatgtaagg cgtctgggtg ctgacatgga gctcgaggcg
      121 gtcgcccacc cgctcggccc agtcggcctc cggttcgatg taggcgtgtt cgacaaaggc
      181 ggtttcgaag acgccttcgg ccacggccgc gcaggttgcg aacgcctcgt cggcattgcc
      241 acggcgcacg ccgccgtcga gcagaagatt tttcggcttg tcggcctgca ccaggggcgc
      301 atcggccgcc gtagcggcgt cgatgccgaa caagggcggc tcgggcgtcc aggcgatcgg
      361 cacctcgccg tcgcgaatgg cgcgcaccgt atcgcgatcg ccgaccagcg ccaccaccgc
      421 ctcgccgcgg tagcgcacct ggccatcggc cagcaccggc tggtccttga tgtcgggata
      481 gatgccgaag ccgttgaagg gcacgtcggc cgccgtcagc acggccgcga gacgccggcg
      541 caacggcgcc aggtcgccca gctcgaaccg cgcccgcgca tgcggcgagc gcacgacgcg
      601 gatccacaaa gcgtcggccg ggatgccgtc ggcgccgaag acgtcgcggc ccgtgacctt
      661 ggccgtgcca tccacccgcg cgacgcgggc accgacggct gcgccggcag ccggcgccac
      721 gaccggcgga ggcgtcgcgg ccgccatcac cgcatcgacg atcttgccgt agcccgtgca
      781 gcggcagagc acgccgccca aggcgtcctc gacctcagcc cggctgggct ggcttgtctg
      841 gcgcaggagt tcctcggctg ccatcagcat gccgggcgta cagatgccgc attgggcggc
      901 gccatgggcg aggaaagatt tttgcagtcc cgccagcgcg ccatcgccgt tgctcaggcc
      961 ctcgaccgtt tcgatccgcc ggccttcgac ctggccgatg gcgacgaggc aggagcaaat
     1021 ctgccgtccg tccaaaagca ccgtgcaggc gccgcagtcg ccggcgtcac agccaacctt
     1081 ggtgccggtg agaccgaggt cgtcgcgcag cgccgacgcc agacgcgtca caggcggccc
     1141 gctccatgcc gccgcctggc cgttcaggac gaagctcacc ttcatgacgc gaagcccaca
     1201 agcaaacggc gcagcaaggt gacgacggcg tcctggcggt agaaggcgct gccgcgcacg
     1261 tcgtcgatcg gcgacagtgg cgagagctgc gaagcgtcga cgcagtcggc gaggtgccga
     1321 tcgactggcg cgccgagcaa tgcggtttcc agttcgggta ggcgttccga caccggcgag
     1381 caggcgccga tcgccactcg cgccgacgcg acctttgcgt cggcgatttc caggaccgcc
     1441 gccgccatgg cgatggagat cacgaggtag cgccgcgcgc cgagcttcag gaaggcgccg
     1501 cgcgccgggt gacgggggcg cggcacatgg atggcgacgg cgatttcacc cggcgcgagg
     1561 gcggtgcggc gcgtgccggt gatgaattgc cggagcggca gcagacgccg gccggccgga
     1621 ccggcgatct cgacctcggc gtcgagggtg agcagacagg gcacgccgtc ggcggccggc
     1681 gaggcgttgc agagattgcc ggcgagcgtg ccggcattct ggatctgccg gccgccgact
     1741 tcacgggcgg cctgcttcag gccatcgaat aggggcggca ggtcggcctc tatgagctcg
     1801 ctccaggtcg tggtggcgcc cagccgccag cccgaatcgt cgactgtgat gccgcgcagg
     1861 gcggcgatcc cgctgatatc gagcacgtcc tcgtcgatcg cccggccgac ccgcgccgga
     1921 tagaagtcgg tgccgccggc cagcaccgta tgcggccggg ccaaggcggc cagcgcctct
     1981 tcgagatagc gagggcggag atagacagcc atatcgttcg tgtacgcacg atgccatacg
     2041 caccctgcga gtcaacgacg agcagccgtt ccggtggccc cgtcaaatga tcttacgagc
     2101 gacggcgtca aacgatcttg gagagcagct cgagcagatg acgctgttct tgcgtgttga
     2161 gcggcttcag cgtctcacgc gacaccgccg ggccattgat caaaagcttg ttcaccagac
     2221 gctggccttc cgtcgtcagg ctgagcaagg tgcgtcgcgc gtcgccggga tcggggcgcg
     2281 aatcgaccag ccggcgttcc ttcagccggc gcaccacgcc ttgcatcgtc gccttgtcca
     2341 tgccgacgag acggccgagc aggttctgcg agagctcggt gtactcgttc agcttcacca
     2401 tgctggagta ctgcgtcggc gttatgttgg gatcgccgat cgagacctgg aagatggcgc
     2461 tggcgcgctg gtgcgcgcgc ctcagcaaat atccgatttg ttcttcgatg cggtagggtc
     2521 ttgatgccgg gcttggtgcc ggcttcggct cttgctgttt ctttgcgaca ttgcttcgca
     2581 tcgcccccgc ctttgcttgg tccttggcta caccgactga gcgcgtcgca caacggtctc
     2641 ataacacttg tcgcaggcgg tgaaatcatg gacccccttg actcattcac gccgacgcgg
     2701 cagcgcgcat gccgtccgct tctgcaacca accgttcccg cgtgttgcgt cgcagcgtct
     2761 cgaccgatga cgtgacggcg agtcgatggc agtctcatcg ctcctgtgac tttaggaaca
     2821 cacaatgccc ggcgcgctcg aaggcatcag gatcgtcgac ctcaccaaca tcatcctcgg
     2881 cccctacggc accatgctgc tggccgacca gggggccgat gtcatcaagg tcgaggcgcc
     2941 cgaaggcgac gcggtccgcc atatcggcga gccggctaag acggccggca tgggcccgac
     3001 ctatctctat gtgaatcgca acaaacgttc gctctgcctc gatctcaaga accaggcggc
     3061 gcgggcggcg ctgctcaagg tcgtcgccgg cgccgatgcc ttcgtccatg cgctgagacc
     3121 gcaggccatc gagggattgg ggctgggcta cgaggcgatc cgcaagataa agcccgacat
     3181 cgtctatgtc ggcgcctacg gctattcggc cgacggtcct tacggaaaac tgccggctta
     3241 tgacgatgcc atccaggccc gcttcggcat cgccgatctg atgggccggg cggcggggga
     3301 cgacgtgccg cgctatccgc cgactatcat cgccgacaag acggtggggc tcaccttcgc
     3361 cttcgcgacc ttgagcgccc tgatgcaccg ccagcgcacc ggcgagggcc agttcgtcga
     3421 ggtgccgatg ttcgagacca tggccgcctg gctgatggtc gagcatttgt gggagcggac
     3481 gtttagcgac gacggcgagg tcggctactc gcggctctta gcccgcaccc gcaagcccta
     3541 ccgcacgctc gacggctgga tggcgatcct gccctacaac gacaagcact ggcgcaattt
     3601 cttcgagatc gtcggccggc ccgaagtgct ggaggatcgg cgctactcga ccctcaacgc
     3661 ccgttcgctc catatcgacg acatgtacgc catggtcgag gcgctggcgc cgaccaggac
     3721 cacggccgca tgggtgaagc tcctggatca ggcgcagatc cccaacgccc cggtgtcgcg
     3781 gccggccgac ctgttcgaag acccgcacct cgtgtggcgg cagctgttca agaagtattc
     3841 gcatcccagc gagggcgaga tcatgatggt cgagccgccc atgcgcatga gccgcacccc
     3901 gcccgccatc cgtagcctgg cgccgctgca gggtgcccat tcgcgcgccg tcctggccga
     3961 agcgggcgtc agcgaggccg agatcgcggc cctcaagcag gccggtgcgc ttatcgaacc
     4021 gtgatggcga gttgggcggc cgccagatct tccagcgccg cgccgaccga cttgaacagg
     4081 gtgatggtgg tggcatcgcc ggtccgccgc ccgctccgct cgccgcgtgc cagctcgaac
     4141 aggtcgccaa ccacgtcatc cacgtcgatc gtgccgttgg ccaggggctg gacgatatcg
     4201 ccggcctctt tcagggcgcc ggcgcgggtg tcgacataga cctgggcacg tccgaccgcc
     4261 ccgtcgtcgc tttcacgcat ctcgggcgtg taggcaccga ccaggtcgag gtgctggcct
     4321 tgcctcagcc agtcgccctc gaccaaaggc gttttcgaca gcgtggcgca ggaaatgata
     4381 tcggcggcgg cgacggcttc cctgcggtca aaaacggcac gcacggaaag cgaccggccg
     4441 agggcgcgcg gcagcgaggc ggcgagttcc cgggcaaggc cctgcgcttg ctcggggcgg
     4501 cgcccccaaa tcgcgacttc gtcgatcggc cgtaccttgg catgcacgcg aatgagctgg
     4561 ggggcgagcg cgcccgtgcc gatcatcagc aaccgccgcg agtcgcgctg cgacaggtag
     4621 cgcgaggcca ggcccgatgc acaggccgtg cgccgcttgg tcagcatggt gccgtccaac
     4681 agcgccagcg gcgcgcccgt ggcgccgtcg agcagcaggt actggccgta gatcgaaggc
     4741 aggccacgct tgccgttgtc ggggaagacg gtgaccagct tgatgccgag acggctttca
     4801 gcgccgcgcg tccaggccgg catcaacagc agggtggcgt ttgccgaacc ggcgccggca
     4861 ggttcggtca gggtgtggtg atggcgcggc ggcatctcgc agccggtgcg gaacagcgcc
     4921 tcgaggcggt cgatcagcgc caggtcgtcg agagcggcat cgacctcggc ggccgaaagg
     4981 accctcacga gaaggggccg cgcgcgccag aagaggacag ttcgggcgcg accagcgcgc
     5041 tttggcgctc gatcgccttc tgctcgcgcg gcgccggacc gctgcggatt ggtggcgggc
     5101 tggcggcagc ggtggtctcg cgcaggcgct ggacctcgcg ctcgagccgc gccgcctcgc
     5161 cgctggcctc gcgggcgcgg cggcgatggc ggcggccggc ccaccagccc agccccaggc
     5221 cagccagcac acccagcaac agcaggagca cgaccagcag atagagcggc atcacgatct
     5281 gctgcggcag cggccacagc gccagctgca cgggctggct gttgctgacg gcgatcagca
     5341 cgccgaccaa cacgaaaagc agaaacaggg cgcgggacag gatcttcatg cggccgacag
     5401 catggcacag cccgctgcac agacgcgagg ctgcgctact tcttgtcgcc cgccggttcg
     5461 gccggcgcca agcccgccgc gcgcgcggct tccttgttga ggcggtcgcg caggtccttg
     5521 ccggtcttga agtagggcac gcgcttggac gccacggcga cctgctcgcc ggtgcgcgga
     5581 ttgcgcccgg tgcggggttc gcgcttcttc accgagaatg cgccgaagcc gcgcaattcc
     5641 acgcggtgtc cgccggccaa tgccttggag atttcgtcga agaccgtggc cacgatccgc
     5701 tcgacatccc tttgatagag atggggattc cgggccgcca ggcgggcaat cagctccgac
     5761 ttggtcattg ctgcgacaat agagcaaaaa acccaggcgt tcaagcctaa gccattgaat
     5821 caaaaaggaa aggccggctc ctaccgagcc ggccctcgat ttggtccgaa acggcgacct
     5881 tatttggctt cttcctcgcc cttcttctgc gccttgctga gcgccgcgcc caggatgtcg
     5941 cccaggctgg cgcccgagtc ggacgagccg aaatcggcca tcgccttctt ctcctcgtcg
     6001 agctcgcgcg ccttgaccga cagcacgacc cggcgcgagg ccttgtcgat gttggtgatc
     6061 ttggcgtcga gcttgtcgcc gatcgcgtag cggtcgggac gctgctcgga gcggtcgcgg
     6121 gaaagctctg atttgcggat gaagcccggg atgccgtcct gcaccgtgac gtcgatgccg
     6181 ttgtcctgga tgccggccac gatgacggtg accacgtcgc ccttcttggc gaccgagccc
     6241 accttctcga acggatcgtt ggcgagctgc ttgatgccga gcgagatgcg ctccttgtcg
     6301 atgtcgacgt cgaggacctt gaccttgacc tggtcgccct tcttgtagtc gcggatcgcc
     6361 tcgtcgcccg ccttgtccca cgacaggtcg ctcaaatgga ccatgccgtc gatgtcgccg
     6421 ggcaggccga cgaacaggcc gaactcggtg atgttgcgga cctcgccctc gagctcggtg
     6481 ccggccgggt acttctcggc gaagctctcc cacggattgg ccatgcactg cttgaggccg
     6541 agcgagatgc ggcgcttcga catgtcgacg tccagcacca tcacttcgac ctcctgcgag
     6601 gtcgagacga tcttgcccgg atggacgttc ttcttggtcc agctcatttc gctgacatgg
     6661 accaggccct cgacgcccgg ctcgagctcg acgaaggcgc cgtagtcggt gatgttggtg
     6721 acgcggccct tgagcttcag cccgaccgga tacttggcgc cggcgccgtc ccacggatcg
     6781 ctcatcagct gcttcatgcc gagcgagatg cgctgcgtct cggggttgaa gcggatgacc
     6841 tgcaccttga cctgctggcc gatggtcagc gcctccgacg gatggttgat gcgcttccag
     6901 gcgatgtcgg tgacgtgcag caggccgtcg acgccgccca gatcgacgaa cgcgccgtag
     6961 tcggtgatgt tcttgaccac gccgtcgagc acctggccct ccgacaaggc gcccatcagg
     7021 cgcgtccggt cctcggcgcg ggtctcttcc atgacggcgc ggcgtgacac cacgatgttg
     7081 ccgcggcggc ggtccatctt gagaatggcg aactgctggg cctggcccat caacgggccg
     7141 acatcgcgca ccgggcggac atcgacctgg ctgcccggca ggaaggccac ggcgccagag
     7201 aggtcgaccg tgaagccacc cttcacgcgg ccgaagatcg tacccatgac gcgttcctgg
     7261 tcgttgaacg ccttctcgag ctgggtccag gcttcctcgc ggcgcgcctt gtcgcgcgac
     7321 aggacggctt cgccctcctt gttctccatg cgatcgacga agatgtcgac cacgtcgcct
     7381 tccttcactt ccggcgcgcc catcccgttg gcgaactcgc gcagggcgac ccggccctcg
     7441 gacttcagcc cgacatcgat ggtgacgaaa tcgttggcaa tgcggacgac cgtgcctttg
     7501 acgaccgatc cttcgaaact cgtcgaaccg cccagcgatt cgtcgaggag tgctgcgaac
     7561 tctgaacttg aagtgtcgtt cgcgggttta cgtagggcgc tgcccttcgg catgaaatac
     7621 tctccttcat cgatcccggg cgaaacgctg ccgcccgtcg gccaaccggt taagtccggc
     7681 ggatccattg ccttgagaac accaacgccg gaccacgcgc ccggacgcaa tcgccgctca
     7741 ttaaaaatct tcgatccgcc ggcggcgact tatggcccgg ccgatcgaaa gcccttgctc
     7801 gctatgaacg ccaaggcggc ggcgaaggcc gcgtcggcat ccatgtcgct ggtatcgaga
     7861 aggtaagcat cgggtgcggc tttcaaaggt gcagccgccc gttcgctgtc gcgacggtcc
     7921 cgctccgcca tctcggcaag aacgcgcggt cttatagtgt cgaccccccg ttcgcgcaac
     7981 tcccggtacc ggcgttcggc ccgggcttgc aggcttgccg tcacaaagaa tttcacagtc
     8041 gcgtcggggc agatcaccgt gccgatgtcg cgcccatcga gcacggctcc ggacggctga
     8101 tatgcgaatt ttttctgaaa attcaagagg ttggcgcgaa cttccgggat tgccgccacg
     8161 cgcgagccgg cctgccccgc ctgatcggtc cgcagatcgg gattgtcgag atcgcgcgcc
     8221 cgcagggcgg ccgcaacgct ggcggcgggc tcaccggtcc gttcggccgc ccagccaacg
     8281 gcgcgataga gcaggccggt gtcgagatgg ggcagcccga aatgggcagc gagccgcgta
     8341 gcgagcgtgc ccttgccgga agccgagggc ccgtcgatgg caatgatcag aggggccgtc
     8401 acgccgcctc gattttggcg ccgaggctgt tcatcagcgc ggcgaagccg ggaaagctgg
     8461 tgtcgatcgg cgagccgtcg tcgaccgcga ccggctggcg ggccgccagc cccagcacca
     8521 ggaaggacat ggcgatgcgg tggtcgagat gcgtcgccac caggccgccg cctggcggcg
     8581 gcgcaccgct gccatgcacc accagggtgt ccgcgccaat ctcgtgcttc acgccgttgg
     8641 cctgcagtcc cgccgcgacg ctggccagcc ggtcgctctc cttggcgcgc agttcggcca
     8701 gacccagcat gcgggtcgtg cccttggcgc acgacgcggc cacggcgagg atgggatatt
     8761 catcgatcat cgagggtgcg cgctcggccg gcacctcgat gccttcgaga ccgccgcctt
     8821 tgacgcgcag gtcggccacc ggttcgccgc ccacgtcgcg ggcattctcc aaggcgatgt
     8881 cagcgcccat ctcgcgcagg gtctgataga ggccggcgcg caacggattg agcccgacat
     8941 tctcgaccgt gacgtcgctg cctggccgga tcgccgccgc tacgaccgcg aaggcggccg
     9001 atgacggatc gcccggcacc acgatgtcgc ggcccgtgag ctcgggccag ccgacgacag
     9061 tgatgcgctt gccgcggtct tcggccgccg tcacgcggac ctcggcgccg aagtggcgca
     9121 gcatgcgctc ggtgtgatca cgcgtcgcct cgggctcgat caccgtggtc tcgccggcag
     9181 tgttcaagcc ggccagcagg atggcgctct t
//
LOCUS       DASWGA010000616         1835 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1460078, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000616 DASWGA010000000
VERSION     DASWGA010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1460078"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /locus_tag="VF991_14460"
     CDS             complement(<1..753)
                     /locus_tag="VF991_14460"
                     /inference="COORDINATES: protein motif:HMM:NF024956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4131 domain-containing protein"
                     /protein_id="HEX9557694.1"
                     /translation="MAGARTWILDRLDAERSRWMLWLPVAMGLGIAVYFELPSEPPLW
                     LGPVLAAGAFVLAFLAPAGSLARALAIGLVATAAGLGLVTWRTATLAAPTLNRPLFSI
                     NVEGRIADIQRLPEGVRVVLEAVRLKGNGVPAPEMMPARLRVSLSKGAPPIHVGDRLL
                     VLANLSPPAGPAAPGAFDFQRVAWYLQLGAVGYALAPATVIERGRPDGIVRTIDAMRA
                     DITARILKALPGPEGGVVAALLVGEQTAVDKNI"
     gene            862..>1835
                     /gene="gltX"
                     /locus_tag="VF991_14465"
     CDS             862..>1835
                     /gene="gltX"
                     /locus_tag="VF991_14465"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEX9557695.1"
                     /translation="MTVVTRFAPSPTGFLHIGGARTALFNWLFARHHGGKYLLRIEDT
                     DRARSTSPAIEAILDGLSWLGLQWDGDVTFQFARAARHAEVARQMLAEGKAYHCYASP
                     QELEEMRDAQRRAGVPVRYDGRWRDRDPNEAPPGVAPVIRLRAPQAGQTVIQDAVQGE
                     VKVENAQLDDMILLRADGSPTYMLAVVVDDHDMDVTHVIRGDDHLNNAFRQLQIIRAM
                     GWPEPVYAHIPLIHGPDGAKLSKRHGALGVDAYRDMGFLPAALRNYLLRLGWGHGDDE
                     IISTEQAIEWFDLPGVGRSAARFDLAKLTNLNAHYLRETPDADLLAMVL"
BASE COUNT          291 a          687 c          595 g          262 t
ORIGIN      
        1 tatgttcttg tcgacggcgg tctgctcgcc gacgagcagg gccgccacca cgccgccctc
       61 gggtccgggc agggccttca ggatgcgcgc cgtgatgtcg gcgcgcatcg cgtcgatcgt
      121 gcgcacgatg ccgtcgggcc ggccccgctc gatcaccgtc gccggcgcca gcgcatagcc
      181 cacggcgccg agctgcaggt accaggcgac acgctggaaa tcgaaggcgc cgggcgccgc
      241 cggacccgcc ggcggcgaca gattggcgag caccagcagg cgatcgccga cgtggatcgg
      301 cggcgcgcct ttggacagcg acacccgcag ccgcgccggc atcatctccg gcgccggcac
      361 gccgttgcct ttcaggcgca ccgcctcgag cacgacccgc acgccctcgg gcaggcgctg
      421 gatgtcggcg atgcgtccct cgacattgat gctgaacagc ggccggttga gggtcggcgc
      481 cgcgagggtc gcggtacgcc aggtaacgag gccgagcccg gcggcggtcg ccaccaggcc
      541 gatcgccagc gcccgggcga ggctgccagc gggcgccagg aaggccagca cgaacgcgcc
      601 ggccgccagc accggcccca gccacagcgg cggctcgctc ggcaattcga agtagacggc
      661 aatgcccagg cccatcgcca ccggcagcca cagcatccag cggctgcgct cggcatcgag
      721 tcggtcgagg atccaggtgc gtgcccccgc cacgccatct cccttgtttg acagtaccca
      781 aaccctcgcc tacctacggc gcgtttttcc ggccgaaatg cggcgaaagc cgcacgtact
      841 gagagcaatg ccctcttcgc catgaccgtc gttacccgtt ttgccccctc gccgaccggc
      901 tttctgcata tcggcggcgc gcgtaccgcg ctcttcaact ggctgtttgc ccgccatcac
      961 ggcggcaaat acctgctgcg catcgaggat accgaccgcg cgcgctccac ctcgcccgcc
     1021 atcgaggcca tcctcgatgg cctgtcctgg ctcgggctac agtgggacgg cgacgtcacc
     1081 ttccagttcg cccgtgcggc gcgtcacgcc gaggtggcgc gccagatgct ggccgagggc
     1141 aaggcctatc attgctacgc ctcaccccag gaactggagg agatgcgcga cgcccaacgc
     1201 cgggccggcg tgccggtgcg ctatgacggc cgctggcgcg accgcgatcc aaacgaggcg
     1261 ccgcccggcg tggcgccggt cattcgcctg cgcgcgcctc aggccggcca gaccgtgatc
     1321 caggatgccg tgcagggcga ggtcaaggtc gagaacgccc agctcgacga catgatcctg
     1381 ctgcgcgccg acggctcgcc gacctacatg ctggccgtcg tcgtcgacga tcacgacatg
     1441 gacgtcacgc atgtgatccg cggcgacgat cacctgaaca acgccttccg ccagctccag
     1501 atcatccgcg ccatgggctg gccggagccg gtctatgccc acatcccgct gatccacggt
     1561 cccgacggcg ccaagctcag caagcgccac ggcgcactcg gcgtcgacgc ctaccgcgac
     1621 atgggcttcc tgccggcggc gctgcgcaac tacctgctgc ggctaggctg gggccatggc
     1681 gacgacgaga tcatatcgac cgagcaggcg atcgaatggt tcgacctgcc gggcgtcggc
     1741 cgctcggccg cacgcttcga tctcgccaag ctcaccaacc tcaatgcgca ctacctgcgc
     1801 gagacgcccg acgccgatct tttagcgatg gtgct
//
LOCUS       DASWGA010000617         2059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1213335, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000617 DASWGA010000000
VERSION     DASWGA010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1213335"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VF991_14470"
     CDS             <1..406
                     /locus_tag="VF991_14470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX9557696.1"
                     /translation="ETVAPEASLQKAAEAMEAMGVGSLPVCQGRRLVGTITDRDIVVR
                     GVATGRSPVEMLVRECMTEDISYAFEDEDAEEVLARMKALQVRRLAVLNNDKNLVGIV
                     SLGDIATEPRAADLKDVGEAIAEISEPSRPHK"
     gene            complement(545..>2059)
                     /locus_tag="VF991_14475"
     CDS             complement(545..>2059)
                     /locus_tag="VF991_14475"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9557697.1"
                     /translation="ARILGNGGNAFDAAAATAAALNVVEPYMSGLAGQGMATCYIAAE
                     KRVRSLNFMSRIPRQFPLDRLTNREQILRGPIAVGAPGNLAGWCEMVSTYGTRKLPEL
                     FAPAIGIARDGFSLIEFNAEEIGGATSELRGQAKLYPEWSRTYLEGIGGGRPTIGAVL
                     KQPDLARTLEALAAEGPGLMYGGALGKKVIERLAELGGCLTMDDLLDTKAHWMDPVAA
                     SYRGRTIHVPPPPCEAFQYLLTLRILEGFDLARLPRNGTDHIDTVLRAIRVAAGVRIA
                     VGVPTQQKLAELLSDGHVESLRARVRDGKPVDGPTEQWTAPASEGHTTSFSIADKGGN
                     MVCVTQSLGSVFGSGVVVPGTGVCLNNFLYWADVNPKSPNRVKQGDAMPICVAPSIVT
                     DGDRPVLALGTPGSYGILQTQPQAIVQYIDFGLPLQQAIEAPRARLTDGRAVLLESRV
                     DPKVHDELRARGHGLSSGPDWTMKVGGMQGVAVDAAGTFTGGCDPRRDGYVVPA"
BASE COUNT          320 a          697 c          698 g          344 t
ORIGIN      
        1 cgagacggtg gcgccggagg cttcgcttca gaaggccgcc gaggccatgg aagcgatggg
       61 cgtcggctcc ctgccggtct gccagggccg gcggctggtc ggcaccatca ccgaccgcga
      121 catcgtggtg cgcggcgtgg cgacgggacg gtcgccggtc gagatgctgg tgcgcgagtg
      181 catgaccgag gacatctcct atgccttcga ggacgaggat gccgaagagg tcctggcccg
      241 catgaaggcc ttgcaagtgc gccgactcgc ggtgctcaac aacgacaaga acctcgtcgg
      301 catcgtgtcc ctgggcgata tcgccaccga acctcgcgcc gcggacttga aggacgtcgg
      361 cgaggcgatc gccgagatct ccgaaccgtc gcggccgcat aagtagctgc tgggattgtc
      421 gctcagtcgt tgctgagaga gtcattgtca tcccgagcgc agcgagggac ctttaaggcc
      481 gcagtaaagg tcctcgctac gctcgggatg acagtttttc tggtcttata tcgtgcgtta
      541 gctgctaagc cggcacgaca tacccgtcac gtcttggatc gcagccgccg gtgaaggtac
      601 cggcggcatc gaccgccacg ccctgcatgc cgcccacctt catggtccag tccggcccgc
      661 tgctcagccc atggccgcgc gcgcgcagct cgtcgtgcac cttcggatcg actcgcgatt
      721 ccagcaacac cgcccgccca tccgtcagtc gggcgcgcgg cgcttcgatg gcctgctgca
      781 gtggcaggcc gaaatcgatg tactgcacaa tggcctgcgg ctgggtctgc aggatgccgt
      841 agctgccggg cgtgcccagc gccagcaccg gcctgtcgcc gtcggtgacg atcgagggcg
      901 cgacgcagat cggcatggcg tctccctgct tcaccctgtt ggggctcttc gggttcacgt
      961 cggcccaata gaggaagttg ttgaggcaga ccccggtgcc gggcacgacc acgcccgagc
     1021 cgaacacgct gccgagactc tgcgtcacgc acaccatgtt gccccccttg tcggcgatcg
     1081 agaacgacgt ggtatggccc tcggacgcgg gcgccgtcca ttgctcggtc ggaccgtcga
     1141 ccggcttgcc gtcgcgcacc cgcgcccgca ggctctcgac gtgaccgtcc gataaaagct
     1201 cggcgagctt ctgctgggtc ggcacgccca ccgcgatgcg cacgcccgcc gccacgcgga
     1261 tggcgcgcag cacggtgtcg atatggtcgg tgccgttgcg cggcagcctg gcgaggtcga
     1321 agccttcgag gatgcgaagg gtcagcaggt actggaacgc ctcgcaaggc ggcggcggca
     1381 cgtggatcgt gcggccgcgg tagctcgccg caaccggatc catccagtgc gccttggtgt
     1441 ccaaaagatc gtccatggtg aggcagccgc ccagctcggc cagccgctcg atcaccttct
     1501 tgccgagcgc gccgccatac atcaagccag gtccctcggc cgccagggct tctagcgtcc
     1561 tggcgaggtc gggctgcttc agcaccgcgc cgatcgtcgg ccggccgccg ccgatgcctt
     1621 cgagataggt gcgcgaccat tcgggataga gcttggcctg gccgcgcagc tccgatgtcg
     1681 cgccgccgat ctcctcggcg ttgaactcga tcaggctaaa gccgtcgcgg gcgatgccga
     1741 tggccggcgc gaacagctcg ggcagcttcc tggtgccgta ggtgctcacc atttcgcacc
     1801 agcccgcgag attgccgggc gcgccgacgg cgatcggccc gcgcaggatc tgctcgcggt
     1861 tggtgagcct gtcgagcggg aactggcgcg ggatgcggct catgaaattg agcgagcgca
     1921 cgcgcttctc ggcggcgatg tagcaggtcg ccataccctg gccggcgagg cccgacatgt
     1981 aaggctcgac cacgttcagg gctgccgcgg tcgccgctgc cgcgtcgaaa gcgttgccgc
     2041 cattgcccag gatgcgcgc
//
LOCUS       DASWGA010000618         4496 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1972479, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000618 DASWGA010000000
VERSION     DASWGA010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4496
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1972479"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..905
                     /locus_tag="VF991_14480"
     CDS             <1..905
                     /locus_tag="VF991_14480"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016813 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear
                     amidines [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase/carbamoylase family amidase"
                     /protein_id="HEX9557698.1"
                     /translation="AKVTTRRPIAVAFFTNEEGARFQPDMLGSLVYAGGLGLNEAYAA
                     ADKDGSSVGDELRRIGYLGPAEPGTLRPHAFVELHIEQGPILDEEKVRIGVVESVQGI
                     SWTEYTVTGVSNHAGTTPMRLRRDAGYLAASVNVFARRLAGEMGGHQVATVGALSLRP
                     NLINVVPNRAVFTVDLRNTDEEKLKEAEARVASHVATVAQEERVEVATKVLARFEPVI
                     FDAGLVDRVEHHARALGLSTRRMPSGAGHDAQMMQRICPTAMIFVPSVAGLSHNVKEH
                     TEAADLLAGAQLLLNLMVELASED"
     gene            complement(894..1316)
                     /locus_tag="VF991_14485"
     CDS             complement(894..1316)
                     /locus_tag="VF991_14485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018858222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9557699.1"
                     /translation="MSGHIRRARPEERDRISEIRFAVQENQLSDPSLVTDADYAWFTE
                     HPGIRVWEEEGEILGFSAGDTRDSTIWALFVDPAHHHRGIGRALFEAACDTLRRAGHR
                     SAMLTTDPGTRAERFYRAAGWTVVGTSKRGELMFTSIL"
     gene            complement(1331..2620)
                     /locus_tag="VF991_14490"
     CDS             complement(1331..2620)
                     /locus_tag="VF991_14490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018012845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX9557700.1"
                     /translation="MALTILTVVFTLCLMLGVPVAFSIGLSAVATILYEGLPLAVVFQ
                     RMTSGMNIFSFLAIPFFIFAGELMLYGGVADRIVAFAKSLVGHVRGGLGMANVVACTL
                     FGGVSGSPVADVSATGAVMIPMMKKEGYHADYAVNVTTHAALVGALMPTSHNMIIYSL
                     AAGGKVSITALILAGIVPAALLMICMLVAAYLVAIKRGYPAGTFPGWHAVLWSMVGAI
                     PGLLVVAIILIGILSGVFTATESAAVAVIYALALTIFIYRSLSWENFLKAAAKAVKTT
                     GIVLLLIGVSNTFGYLITLYEVADLTGKALADLSTDPWMIFFLVNLILFILGTFLDMA
                     ATILICTPIFLPICMQYGMGPVQFGMLMLINCALGLNTPPVGTTQFVGCAIGGISVGQ
                     VMRTILPFYGALIAALLLVTYVPAFSLALPRLFLGKF"
     gene            complement(2611..3108)
                     /locus_tag="VF991_14495"
     CDS             complement(2611..3108)
                     /locus_tag="VF991_14495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX9557701.1"
                     /translation="MFRALVAFNATVSRWCMYLAVSGLIGIVVVVGLQVFGRYVLNDT
                     PIWAESTALVLILYVTMLGAAVGVRDAGHIGLESLLILAPDALRLKLEVVIHILVGTF
                     GLIMAWNGWVLAESVMAYKIPTLGLPEGINQLPLVISGILIALFSLEHIVALWRGEDV
                     VPSWH"
     gene            complement(3117..4085)
                     /locus_tag="VF991_14500"
     CDS             complement(3117..4085)
                     /locus_tag="VF991_14500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9557702.1"
                     /translation="MRPTAILIALFAALAGTAAEAKEFRSSDVHPLDYPTVQAVVYMG
                     KLIGERTGGKNSVKVFGQSTLGSEKDTIEQTKIGALDMVRVNVAPFNNIVPATIVPSL
                     PFLFKSTAHMRRVLDGPIGDEILAAMEAQGFIGLCFYDSGSRSFYSGKKAIRNVADTK
                     GMKIRVQQSDMWVAMMQAIGANATPLPYAEVYTALKTGVVDAAENNWPSYESSRHYEA
                     AKIYSLTEHSMAPELLVFSKKIWDGLSKDDQAIIRAAAKESVPYMRKLWDEREASARK
                     TVEAAGSQVVADVDKKSFSDAMAPVYAKFAADPKLQDLVKRIQAAD"
     gene            4150..>4496
                     /locus_tag="VF991_14505"
     CDS             4150..>4496
                     /locus_tag="VF991_14505"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX9557703.1"
                     /translation="MPDKPAIPAPPSASGNLAEQVMARLAADIRSGRLGRGARLPTEQ
                     ALTLAMGVSRTVVREAVSALRADGLLVTRRGSGAYVADPAAGPFRIGAARAAALGDIL
                     DVMELRLAVEVEAA"
BASE COUNT          833 a         1443 c         1503 g          717 t
ORIGIN      
        1 acgccaaggt cacgacgcgc cggccgatcg cggtggcgtt cttcaccaac gaagagggcg
       61 cgcgctttca acccgacatg ctgggcagcc tggtctatgc cggtgggctg gggctgaacg
      121 aggcctatgc tgccgccgac aaggacggaa gctcggtcgg cgacgagctg cgccgcatcg
      181 gctatctcgg gcccgccgag cccgggacgc tgaggccaca tgccttcgtc gagctgcata
      241 tcgagcaggg ccccatcctc gacgaggaga aggtcaggat cggtgtcgtc gaaagcgtgc
      301 agggcatctc gtggaccgaa tacaccgtga ccggcgtctc caaccatgcc ggcacgacgc
      361 cgatgcggct gcggcgcgac gccggctacc tcgcggcctc ggtgaatgtc tttgcacgcc
      421 ggcttgccgg agagatgggt ggccaccagg tggccacagt gggcgcgctc tcgctccggc
      481 ccaacctgat caacgtcgtg cccaatcgcg cggtattcac cgtcgacctg cgcaataccg
      541 acgaggaaaa actgaaagaa gccgaagcgc gcgtcgccag ccatgtcgcg acagtcgcgc
      601 aggaggaacg cgtcgaggtt gcgaccaagg tgctggcgcg cttcgaaccg gtgatcttcg
      661 atgcaggcct ggtcgatcgc gtcgagcatc acgcccgggc gctgggcctc agcacgcggc
      721 gcatgccctc gggcgcgggc cacgacgcgc agatgatgca gaggatctgc cccaccgcga
      781 tgatcttcgt gccctcggtc gcggggctca gccacaacgt caaggaacac accgaggcgg
      841 ccgaccttct ggccggcgcc cagctgctgt tgaacctgat ggtggaactg gcctcagagg
      901 attgacgtga acatcagttc gccacgtttg ctggtaccga cgaccgtcca gccggcggcc
      961 cgatagaacc gctccgccct tgtgccgggg tcggtcgtga gcatggcgct gcgatgcccg
     1021 gcgcggcgca gcgtatcgca agcggcttca aaaagggcgc ggccgatccc gcgatggtga
     1081 tgggccggat cgacgaacag cgcccagatc gtgctgtcgc gcgtgtcgcc ggcggaaaaa
     1141 cccaggatct cgccttcctc ttcccagacc cggatgccgg gatgctccgt gaaccacgcg
     1201 tagtccgcgt cggtcaccag gcttggatcg ctgagttggt tctcctgcac ggcgaagcgg
     1261 atctcgctga tgcggtcgcg ctcctcggga cgggcgcggc ggatatgccc ggacatgccg
     1321 gaccctatcg ctagaacttg cccaggaaca ggcgcggcag ggcgagcgag aaagccggca
     1381 cgtaggtcac gagaaggagg gcggcgatca gcgcgccgta gaaaggcagg atggtgcgca
     1441 tcacctggcc caccgagatg ccgccgatgg cgcagccgac gaactgggtg gtgccgaccg
     1501 gcggcgtgtt cagtcccagc gcgcagttga tcagcatcag catgccgaac tgcaccggcc
     1561 ccatgccgta ctgcatgcag atcggcagga agatcggtgt gcagatcagg atggtcgccg
     1621 ccatgtcgag gaaggtgccg aggatgaaca ggatcaggtt gaccaggaag aagatcatcc
     1681 agggatcggt cgacaggtca gccagcgcct tgccggtgag gtcggcgacc tcgtagagcg
     1741 tgatcaggta gccgaaggtg ttggagacgc cgatcagcag cagcacgatg ccggtggtct
     1801 tcaccgcctt ggccgcggcc ttgaggaagt tctcccagct gaggctgcga tagatgaaga
     1861 tggtgagcgc cagcgcgtag atcaccgcaa ccgcggccga ctcggtggcg gtgaacacgc
     1921 cgctcaaaat gccgatcaaa atgatcgcca ccaccagcag cccggggatg gcgccgacca
     1981 tcgaccacag caccgcatgc cagccgggga atgtgccggc gggatagccg cgcttgatcg
     2041 ccaccaggta ggccgccacc agcatgcaga tcatcaggag cgccgccggc acgatgccgg
     2101 ccaggatcag cgctgtgatc gagacttttc cgccggccgc cagcgaataa atgatcatgt
     2161 tatggctggt cggcatcagc gcgccgacca gggccgcatg ggtggttacg ttgacggcat
     2221 agtcggcgtg atagccctcc tttttcatca tcgggatcat cacggcgccg gtcgccgaga
     2281 cgtcggcgac cggcgagccc gagacgccgc cgaacagggt gcaggccacc acattagcca
     2341 tacccagccc gccgcgcaca tggccgacca ggcttttcgc aaaggccacg atgcggtcgg
     2401 cgacgccgcc atagagcatc agctcgccgg caaagatgaa gaacggaatg gcgaggaagg
     2461 agaagatgtt catgcccgac gtcatgcgct ggaacacgac ggcaagcggc agtccctcgt
     2521 agaggatggt ggcgacggcc gagaggccga tcgagaaggc gactggcacg cccagcatca
     2581 ggcagagcgt gaagacgacg gtgaggatgg tcagtgccac gagggaacca cgtcctcgcc
     2641 gcgccacagc gccacgatgt gctcgaggga gaacagggcg atcaggatgc cggagatcac
     2701 cagcggcagc tggttgatgc cttcgggcag gccgagcgtc gggatcttgt aggccatcac
     2761 cgattcggcc agcacccagc cgttccacgc catgatcagt ccgaacgtgc cgaccaggat
     2821 gtggatcacg acctcgagct tcagccggag cgcgtcaggc gccaggatta ggagcgattc
     2881 gaggccgata tggccggcgt cgcgcacgcc gaccgcggca cccaacatgg tgacgtagag
     2941 gatcagcacc aaagcggtgc tctcggccca gatcggcgtg tcgttcagca cgtagcgacc
     3001 gaacacttgc aggccgacaa cgaccacgat gccgatcagc cccgacaccg ccagatacat
     3061 gcaccaacgc gacaccgtcg cgttgaacgc caccaatgca cgaaacatgc gggggcttag
     3121 tcggcggcct ggatgcgctt gaccaggtcc tgaagcttgg gatcggccgc gaacttggcg
     3181 tagaccggcg ccatggcgtc ggagaacgac ttcttgtcga catcggccac gacctgcgaa
     3241 ccggcggcct ccacggtctt gcgcgccgag gcctcgcgct cgtcccacag cttgcgcatg
     3301 tagggcaccg actccttggc cgcggcgcgg atgatcgcct ggtcgtcctt ggacagtccg
     3361 tcccagatct tcttggagaa gaccagcagc tcgggcgcca ttgaatgctc ggtcaggcta
     3421 tagatcttgg ccgcctcgta gtggcgcgag gattcgtagg acggccagtt gttctcggcg
     3481 gcatcaacga cgccggtctt cagcgccgta tagacctcgg catagggcag cggcgtggcg
     3541 ttggcgccga tcgcctgcat catcgccacc cacatgtcgg attgctggac gcggatcttc
     3601 atgcccttgg tgtcggcgac gttcctgatc gccttcttgc ccgaatagaa cgagcgcgag
     3661 cccgaatcgt agaagcacag gccaatgaag ccctgggctt ccatggcggc caggatctcg
     3721 tcgccgatcg gcccgtcgag cacgcgccgc atgtgcgccg tcgacttgaa caggaagggc
     3781 agcgagggaa cgatggtggc gggcacgatg ttgttgaacg gcgccacgtt gacccggacc
     3841 atgtcgagcg cgccgatctt ggtctgctcg atcgtgtcct tctccgaacc gagcgtgctc
     3901 tggccgaaca cctttacgct gttcttgccg ccggtgcgct cgccgatcag cttgcccatg
     3961 tagacgacgg cctgcaccgt cggatagtcg agcggatgga cgtcggagga gcggaactcc
     4021 ttggcctcgg cggccgtgcc ggctaaggcc gcgaacagcg cgatcaggat ggcggtcgga
     4081 cgcatggttt cctttcctcc acgattgcct taaagttgtc tgacaacctt cctttagcac
     4141 cccgttccca tgcccgacaa gcccgccatc cccgcgccgc cgtccgcctc cggcaatctt
     4201 gccgaacagg tgatggcgcg ccttgccgcc gacatcagga gcggcaggct gggacggggc
     4261 gcgcgcctgc cgaccgagca ggccctgacc ctggcaatgg gcgtcagccg aacggtcgtg
     4321 cgcgaagcgg tgtcagcgct gcgggccgac ggccttctcg tcacgcgacg cggctcgggt
     4381 gcctatgtcg ccgatccggc ggcgggcccg ttccgcattg gtgccgctcg tgcggctgcc
     4441 ctgggcgaca ttctcgatgt gatggagctg cgtcttgccg tcgaggtcga ggccgc
//
LOCUS       DASWGA010000619         3914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1972593, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000619 DASWGA010000000
VERSION     DASWGA010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3914
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1972593"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1125)
                     /locus_tag="VF991_14510"
     CDS             complement(<1..1125)
                     /locus_tag="VF991_14510"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEX9557704.1"
                     /translation="MRMSQYFLPTLKENPAEAQIVSHRLMLRAGLVRQTSAGIYAWLP
                     LGFRVLKNIERIVREEQDASGAQEVLMPTIQSAELWRESGRYDAYGPEMLRIKDRHER
                     DMLYGPTNEEMITVLFRDGVKSYRDLPKNLYHIQWKFRDEVRPRFGVMRGREFLMKDN
                     YSFDVDKKGATQSYNKMFVAYLRTFARMGLKAIPMRADTGPIGGDLSHEFIVLADTGE
                     SAVFCHKGLVDKDILSRKIDYGADLQPIVNEWTSLYAATDEMHDKAAFDKIPESERLA
                     ARGIEVGHIFYFGTKYSEPMKAVVAGPGGEQITVEMGSYGIGVSRLVGGIIEASHDDA
                     GIIWPESVAPFKVAILNLKPDDGAVLGACQKLYDGLAAKGI"
     gene            1405..2697
                     /locus_tag="VF991_14515"
     CDS             1405..2697
                     /locus_tag="VF991_14515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEX9557705.1"
                     /translation="MLERIFKLSENKTTVRTEVVAGITTFLTMAYIIFVNPAILEAAK
                     MPFGAVFVATCVAAAIGCFLMAFLANYPIALAPGMGLNAYFAFGVVGGMGYSWQVALG
                     CVFLSGVIFFIISVLPIREWIVNAIPKSLKMAIAAGIGLFLALIALKNAGIVVGDKAT
                     LVTHGQLTSFPVVMAALGFALIVALEYRRVMGGVIIGILAVTVIAIVAGQQKFEGIFD
                     VPPSIAPVFLQMDLGGALQVGLVTVVFAFLFVDLFDNTGTLIALAHRGGFMRPDGTVP
                     RLSRALMSDSAAAMIGAAVGTSTTTSYIESAAGINAGGRTGLTAATVGLLFILALFVA
                     PLAGSIPAYATAPALLYVACLMTRSLTEVAWDDLTEAAPAVITALAMPFTFSIAEGIA
                     FGFISYVAIKLVTGRYRDVHPAVGILAVLFVIKYMVIG"
     gene            complement(2967..3215)
                     /locus_tag="VF991_14520"
     CDS             complement(2967..3215)
                     /locus_tag="VF991_14520"
                     /inference="COORDINATES: protein motif:HMM:NF018978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1467 family protein"
                     /protein_id="HEX9557706.1"
                     /translation="MSWATGVMVYLVIWWTVLFAVLPLGIRKAENPGKGQDRGAPERP
                     DLVRKAIITSIVAAVLWIGFYFLHQADVFSFRRLVEGS"
     gene            complement(3229..3633)
                     /gene="mce"
                     /locus_tag="VF991_14525"
     CDS             complement(3229..3633)
                     /gene="mce"
                     /locus_tag="VF991_14525"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEX9557707.1"
                     /translation="MIGRLNHIAIAVPDLAKAAELYRTVMGAKVSAPKAQPAHGVTVV
                     FVELPNTKIELLHPLGEKSPIANFLARNADGGIHHVCYEVEDIYAARDRLKAQGARVL
                     GDGEPKIGAHDKPVLFLHPKDFTGTLIELEQV"
     gene            complement(3639..>3914)
                     /locus_tag="VF991_14530"
     CDS             complement(3639..>3914)
                     /locus_tag="VF991_14530"
                     /inference="COORDINATES: protein motif:HMM:NF036802.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557708.1"
                     /translation="LWNGAAVATVVIDGKGKAMAPPKVSLRGIEDQDGTLGEAIVAGL
                     KEMLADLSAAERGDNRRIEEAARQAVRRVVRAHLGKKPLTDVHIVRI"
BASE COUNT          647 a         1265 c         1250 g          752 t
ORIGIN      
        1 gatgcccttg gcggcaagcc cgtcatagag cttctggcag gcccccaaca ccgcgccgtc
       61 gtcgggcttg aggttcagga tcgccacctt gaagggtgct accgactccg gccagatgat
      121 gccggcgtcg tcgtggctcg cttcgatgat gccgccgacc aggcgcgaca cgccgatgcc
      181 ataggagccc atctcgaccg tgatctgctc gccgccgggg ccggccacga ccgccttcat
      241 cggctccgaa tacttggtgc cgaaatagaa gatatggccg acctcgatgc cgcgcgcggc
      301 gagccgctcg ctctcgggaa tcttgtcgaa cgcggccttg tcgtgcatct cgtcggtcgc
      361 ggcgtaaagc gacgtccatt cgttgacgat cggctgcagg tcggcgccgt agtcgatctt
      421 gcggctcaag atatccttgt cgaccagccc cttgtggcag aacacggcgc tttcgccggt
      481 gtcggccagg acgatgaatt cgtggctcaa atcgccgccg atcggcccgg tgtcggcgcg
      541 catcggaata gccttcaggc ccatccgggc gaaggtgcgc aggtaggcca cgaacatctt
      601 gttgtaggac tgcgtggcgc ccttcttgtc gacgtcgaag gagtagttgt ccttcatcag
      661 gaactcgcgg ccgcgcataa cgccgaagcg cggccgcacc tcgtcgcgga acttccactg
      721 gatgtgatag aggttcttgg gcaggtcgcg gtagctcttc acgccgtcgc ggaagagcac
      781 ggtgatcatc tcctcgttgg tcgggccgta gagcatgtcg cgctcgtggc ggtcctttat
      841 gcgcagcatc tcggggccgt aggcgtcgta gcggccgctt tcgcgccaca gctcggccga
      901 ctggatggtc ggcatcagca cttcctgcgc ccccgaggca tcctgctcct cgcgcacgat
      961 gcgctcgatg ttcttcaaga cgcgaaagcc gagcggcagc caggcataga tgccggcgct
     1021 ggtctggcga accaggccgg cgcgcagcat cagccgatgc gagacgatct gcgcctctgc
     1081 cggattctcc ttcagggtcg gcagaaagta ctggctcatc cgcattctgg ctggatcctt
     1141 gctcgctgcg tccggagtag ccgcggactg taggaaacgg agcttccaaa ggcaaactgc
     1201 gggctcgcct ccccaacgaa gttggggagg tgtcggcgtc ctacgccgac ggaggggtca
     1261 tactctttcg tcgcagatta atgacccctc cgcccgctgc gcgggcacct ccccttgcta
     1321 tgcaagggga ggaatggcgg cagctagctt tgcacagggc aatgcccgca cactcaacgc
     1381 gagaacaacc gggggagaac acgaatgctc gagcggattt tcaagctcag cgagaacaag
     1441 accacggtcc ggaccgaggt cgtggccggc atcacgacct tcctcaccat ggcctacatc
     1501 atcttcgtca acccggcgat cctcgaggct gccaagatgc cgtttggcgc ggtgttcgtg
     1561 gcgacctgcg tggcggccgc catcggctgc ttcctgatgg ctttcctcgc caactacccg
     1621 atcgcgctgg cgccgggcat ggggctgaac gcctacttcg ccttcggcgt ggtcggtggc
     1681 atgggctata gctggcaggt ggcgctgggc tgcgtgttcc tctccggcgt gatctttttc
     1741 atcatcagcg tgctgccgat ccgcgaatgg atcgtcaatg cgatccccaa gtcgctcaag
     1801 atggcgatcg ccgccggcat cggcctgttc ctggcgctga ttgcgctcaa gaacgccggc
     1861 atcgtggtcg gcgacaaggc gactttggtg acgcacggcc agctcacgag cttcccggtg
     1921 gtgatggcgg cgctgggctt cgccctgatc gtggcgctgg aatatcgccg cgtcatgggc
     1981 ggcgtcatca tcggcatcct ggcggtgacg gtgatcgcca tcgtggccgg ccagcagaaa
     2041 ttcgagggca tcttcgatgt gccgccttcg atcgcccctg tattcctgca gatggacctc
     2101 ggcggcgcgc tgcaggtcgg cttggtgacg gtggtgttcg ccttcctgtt cgtcgacctg
     2161 ttcgacaaca ccggcacgct gatcgcgctc gcccatcgcg gcggcttcat gcggcccgac
     2221 ggcaccgtac cccgcttgag tcgcgcgctg atgtccgaca gcgccgctgc catgatcggc
     2281 gcagcggtcg gcacctcgac caccaccagc tacatcgaga gcgcggcggg catcaatgcc
     2341 ggcggccgca ccggcctcac cgccgcgacc gtgggcctgc tcttcatcct ggcgctgttc
     2401 gtggcgccgc tggccgggtc gatcccggcc tacgcgacgg cgccggcgct gctctacgtc
     2461 gcctgcctaa tgacgcgcag cctcaccgaa gtggcgtggg acgacctcac cgaagcggcg
     2521 cccgccgtga tcaccgcgct tgcgatgccg ttcaccttct cgatcgccga gggcattgcg
     2581 ttcggattca tttcgtacgt cgccatcaag ctcgtcactg gtcgctatcg cgacgttcat
     2641 cccgccgtcg gaattctcgc tgtgctgttc gtgatcaaat acatggtcat cggatgatca
     2701 tgttgcctgg ccggacattt gtttgtagtc gaacgaccgg atggcataac aattgttcgg
     2761 agggcggccg gtgacggaaa gaaaaggtct tggcaaggcg cgggcttccc gctaaacagc
     2821 ctacgccttg ggcgcaggcc tgagtttagg gaggagagcg gcgcaagccg cctagagacg
     2881 agcttcgggg gtagaagaac ggcgggcgaa agcccgtcgt ttctttttgg gatcaacggc
     2941 ttaaataaga aagctaagaa attggattaa ctcccttcga ccagccgacg gaagctgaag
     3001 acgtctgctt ggtgcaaaaa atagaagccg atccagagca cggcggcgac gatcgaggta
     3061 atgatcgcct tgcggaccag atcgggccgc tcgggggcac cgcgatcctg gcctttgcca
     3121 gggttttcag ccttgcggat ccccaagggc aggacggcga acagcaccgt ccaccagatc
     3181 accagataga ccatgacgcc ggtggcccag ctcatggcgc agcgcccctc acacctgctc
     3241 gagctcgatc agcgtgccgg tgaaatcctt gggatgcagg aacagcaccg gcttgtcgtg
     3301 ggcgccgatc ttgggctcgc catcgcccag cacccgcgca ccctgcgcct tgagcctgtc
     3361 acgggcggcg tagatatcct cgacctcgta gcagacgtga tggatgccgc catcggcatt
     3421 gcgggcgagg aagttggcga tcggcgactt ctcgcccagc ggatgcaaaa gctcgatctt
     3481 ggtgttgggc agctcgacga acaccaccgt gacgccgtgc gccggctgcg ccttgggcgc
     3541 gctcaccttg gcgcccatca cggtgcggta aagctcggcc gccttggcga ggtccggcac
     3601 ggcgatggcg atgtggttca ggcgtccgat catgaccgtt agatgcggac gatgtggacg
     3661 tccgtcaacg gcttcttgcc gaggtgcgcg cgcacgacgc gccgcaccgc ctgccgggcg
     3721 gcctcctcga ttcgcctgtt atcgcctcgt tcggcggcgc tgagatcggc caacatctcc
     3781 ttgaggccgg ccacgatggc ctcgccaagc gtgccgtctt ggtcctcgat gccgcgcagc
     3841 gacactttgg gcggcgccat ggccttgccc tttccgtcga tcaccaccgt ggccaccgcg
     3901 gcgccgttcc acag
//
LOCUS       DASWGA010000620         5771 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_445254, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000620 DASWGA010000000
VERSION     DASWGA010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5771
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445254"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="VF991_14535"
     CDS             complement(<1..365)
                     /locus_tag="VF991_14535"
                     /inference="COORDINATES: protein motif:HMM:TIGR01493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX9557709.1"
                     /translation="MTHSSRRDGKPSALAGAEICVFDAYGTLFDFNSAVARHRAAIGP
                     NADALSDMWRSKQIQYTWLRNGMGAYAKFWQVTGEALDHCLAAYGIKDAGVRDKLLGA
                     YLALDPFAEVPAMLDRLKRA"
     gene            417..737
                     /locus_tag="VF991_14540"
     CDS             417..737
                     /locus_tag="VF991_14540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="monooxygenase"
                     /protein_id="HEX9557710.1"
                     /translation="MFVAIVQIPMTKRPRDAAVAAARKSAPTYTALGAKGLLRKYYLN
                     GEAGGGGVYLWESEAAARAWYTPDWEKRMEAAFGAKPVVTYYDNHVVVDNEAGKVRVE
                     GQDT"
     gene            748..1713
                     /locus_tag="VF991_14545"
     CDS             748..1713
                     /locus_tag="VF991_14545"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9557711.1"
                     /translation="MERRRLGRTGLKVSVLGYGAGAVGGLFTKGRPADQERAAARAIE
                     AGINYFDTAALYGNGESERNLGRVLKALKADVVVGTKVRLSAEHRADVAKAIAQGMDD
                     SLRRMGRDHVDLFQLHNPLVTKDGGDNLAIDVALNEVAPALEKLRKAGKTRFIGLSGV
                     GETAALQRAIDSKLFDTIQVVYNALNPSAGGPMPKGAPGQDYGRLLDRAKAADMGTII
                     IRALAGGALAGTAERHPLAMQVVDPIGSAPDFAADVARAKELEPLVREGVAGSLTELA
                     ERFVIAHPAVSTMLVGYSTLDQLEAAIAAVNKGPLPETTLKRVAS"
     gene            1813..2103
                     /locus_tag="VF991_14550"
     CDS             1813..2103
                     /locus_tag="VF991_14550"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX9557712.1"
                     /translation="MHSTSDLVTDTLERVALPVDVMDEICHQLAPYQLEEGPITGKTV
                     IYKDLSIDSLAVMDIVMELEDRFDVFIPINTVAEIHTVEELASAILTLQARR"
     gene            complement(2113..4296)
                     /locus_tag="VF991_14555"
     CDS             complement(2113..4296)
                     /locus_tag="VF991_14555"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX9557713.1"
                     /translation="MKSVRSPLILLAGLLASEPLLAQQGGVTILRGQSNDPPTQAAPD
                     TGVRRVPVERGVERNAPTRPAAPQAGSSATPLPVDKDGPSNGLMPPPPPSDMAQAMAS
                     SKPLTAAEAASFAAALKAIDEGRYGDARPMVANFKNPLLSRYVDWNILRVAPRTDADF
                     ASTWRFLRDNPDWPEPEVLRRQAEDRLAPETAAGDVVRYFTAFPPLTSAGHMRRLEAA
                     QAASPGDVQKFASDSWQNATFRPSDENDFLNRYGQLLSGQDHIARFDRILRDGRPQVA
                     RELLAKLPPDYQPVANARLAMATRAADAPTVLRGVSAARLDEPAIKLERAQWLRRTGS
                     LDDAKNLLTGPVANQNDTWWNERNQLARDLLAAGRAADAYAVAVPHGLTKGVAFAEAE
                     FLAGWIALRHLKRVAEAQKHFQTLYDGVSTDISKSRAAYWLGRTHEAAGRPKDANEWY
                     GRASGFGQTFYGQLAARKLPGSAARLPTDPVASATDRQSLGGRELVTVARYLGQAGDF
                     ERSRPFLLRLARMISAPGETALLAQLAVELKRPDVALTIARRATENGVTLFDTAFPVV
                     DLGATGSIERALALAVSRQESSFNAAAVSPSGALGLMQLLPGTARDVAGRLGVAFIQD
                     KLTRDPAYNVQLGSQYLAEMLQRFGGSYELALAAYNAGPNRVGRWLETIGDPRNGKID
                     MVDWIEMIPFRETRNYVQRIMEGVAVYRDRLNGPFRTMPPALGRS"
     gene            4405..5283
                     /gene="dapA"
                     /locus_tag="VF991_14560"
     CDS             4405..5283
                     /gene="dapA"
                     /locus_tag="VF991_14560"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEX9557714.1"
                     /translation="MFTGSLVALITPFKNGSVDEKGFEKFVAWQIKEGTDGLVPCGTT
                     GESPTLSYDEHTRVIDICIAAAKGSGVPVIAGTGSNSTEEAIDLTRHAKKAGADAAML
                     VVPYYNKPTQEGLFQHFKAVGEAVDIPILLYNVPPRTGGDMQVDTVVRLSQVRNIIGI
                     KDASYDMARPTLTKLRAKKGFLQLSGEDASAVGFLAQGGDGCISVTANIAPRLCGDMH
                     DAWKKRDLDKVFEIQDRLMPLHKALFIETSPAPVKYGAELLGQASAKLRLPLVECTDA
                     TKKQVRDAMVHAGLIN"
     gene            5404..>5771
                     /gene="smpB"
                     /locus_tag="VF991_14565"
     CDS             5404..>5771
                     /gene="smpB"
                     /locus_tag="VF991_14565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEX9557715.1"
                     /translation="MAKAPDLGRTVVAQNRKARHNYFIEETFEAGLALTGTEVKSLRG
                     GRSSIGESYVTEQGGEAWLVNANIPEYASGNRFNHEPRRPRKLLLHRKQINKLIGAIQ
                     REGRTVVPLQVYFNPRGRAK"
BASE COUNT         1006 a         1876 c         1988 g          901 t
ORIGIN      
        1 gcacgcttca gcctgtcgag catcgccggc acctcggcga agggatcgag ggcgagatag
       61 gcgcccaaca gcttgtcgcg cacgccggca tccttaatgc cataggcggc caggcaatgg
      121 tcgagcgctt cgccggtgac ctgccagaat ttggcatagg cgcccatgcc gttgcgcagc
      181 caggtgtact ggatctgctt ggagcgccac atgtccgaca gcgcgtcggc gttgggaccg
      241 atggcggcgc ggtggcgggc gaccgccgaa ttgaagtcga acagcgtgcc gtaggcgtcg
      301 aacacgcaaa tttcggcgcc ggcgagggcc gacggcttgc cgtcgcgacg ggaagagtgc
      361 gtcatgcgtg agaccttcat ttgcccgcga ctggcgatga ccgtaggcta acaagcatgt
      421 tcgtcgccat cgttcaaatc cccatgacca agcgcccgcg cgacgctgcc gtcgcggcgg
      481 cgcgcaagtc ggcgccgacc tacaccgcgc tcggcgccaa gggcctgttg aggaagtact
      541 acctcaacgg cgaagccggc ggcggcgggg tctatctctg ggagtcggag gccgccgcgc
      601 gcgcctggta cacgccggac tgggagaagc gcatggaggc ggcgttcggc gccaagcccg
      661 tggtgacgta ctacgacaac cacgtcgtgg tcgacaatga agcgggcaag gtccgcgttg
      721 aaggccagga tacgtaagag ggctgacatg gaaagacgca ggctgggccg gaccggtcta
      781 aaagtctcgg tcctgggtta tggcgcaggg gcggtcggcg gactgttcac caagggccgg
      841 ccggccgacc aggagcgcgc cgcggcgcgc gccatcgagg ctggcatcaa ctatttcgac
      901 accgcggcgc tctacggcaa cggcgagtcc gagcgcaatc tcggccgcgt gctcaaggca
      961 ctgaaggccg acgtcgttgt cggcaccaag gtgcggctct cggccgaaca ccgtgccgat
     1021 gtcgccaaag cgatcgcgca gggcatggac gacagcctcc gccgcatggg ccgtgaccat
     1081 gtcgacctat tccagttgca caatccgctg gtcaccaagg atggcggcga caatcttgcc
     1141 atcgacgtcg ctttgaacga ggtggcgccg gctttggaga aacttcgcaa ggccggcaag
     1201 acacgcttca tcggtctgag cggcgtcggc gagacggcgg cactgcagcg cgccatcgat
     1261 tccaagctct ttgacaccat ccaggtcgtc tacaacgcgc tcaatcccag cgccggcggg
     1321 ccgatgccca agggggcgcc gggccaggat tacggccgtt tgctcgatcg ggcgaaagcc
     1381 gccgacatgg gcaccatcat catccgcgcg ctggcgggcg gtgctctcgc cggcaccgcc
     1441 gagcgtcacc cgctcgccat gcaggtcgtc gatccgatcg gctcggcccc cgacttcgcg
     1501 gccgacgtgg cgcgcgccaa agagctcgag ccgctggtgc gcgagggcgt ggccggcagc
     1561 ttgaccgaac tcgccgagcg cttcgtgatc gcccatcccg ccgtgtcgac catgctggtc
     1621 ggctattcga cgctcgacca gctcgaggct gccatcgccg cggtgaacaa gggaccattg
     1681 ccggaaacga cattgaagcg ggtcgcgtcc tgagcgttgt cgtcgtgctg aaacatcagg
     1741 caatgaattg ttatttcaca tcgaccagcc gttgccgtct gatgtcttcg ccttgcctcg
     1801 gcggagactg ctttgcacag cacaagcgac ttagtcactg atacattgga gcgcgtagcg
     1861 cttcctgtcg acgtgatgga tgagatctgc caccaactcg cgccctatca gctggaggaa
     1921 gggccgatca ccggaaagac cgtgatctac aaggacctgt ccatcgattc tctggcggtc
     1981 atggacatcg tcatggagct cgaagaccgg ttcgacgtct tcattccgat caatacagtg
     2041 gcggaaatcc acacggtcga agaactggcc agcgcgatcc tgaccctgca ggcccgccgc
     2101 tgagctttcc gctcaggacc gcccgagcgc cggcggcatg gtgcggaacg ggccgttcag
     2161 ccggtcgcgg tagacggcga cgccttccat gatgcgctgg acgtagttgc gggtctcgcg
     2221 gaacgggatc atctcgatcc agtcgaccat gtcaatcttg ccgttgcgcg gatcgccgat
     2281 cgtctccagc cagcggccga cgcgattggg cccggcattg taggcagcga gcgcgagctc
     2341 ataggagccg ccgaagcgct gcaacatctc cgccaggtac tggctgccga gctgcacgtt
     2401 gtaggccgga tcgcgcgtca gcttgtcctg gatgaaggcc acgcccagcc ggccggcgac
     2461 gtcgcgcgcc gtgcccggca gaagctgcat caggccgagc gcccccgacg gcgagacggc
     2521 ggcggcattg aacgagcttt cctggcgcga cacggcgaga gccagcgccc gctcgatcga
     2581 tcccgtggcg ccgagatcga cgacggggaa ggcggtgtcg aacagggtga cgccgttctc
     2641 ggtcgcgcgc cgcgcgatgg tgagtgccac gtcgggacgt ttcagctcga cggcgagctg
     2701 ggccagcagc gccgtctcgc ccggcgcgct gatcatgcgg gcaagccgca gcaggaaggg
     2761 tcgcgagcgc tcgaagtcgc cggcctggcc gagatagcgc gccacggtga cgagctcgcg
     2821 gccgcccagc gactggcggt cggtcgccga ggcgacgggg tcggtcggca ggcgcgcggc
     2881 gctgcccggc agcttgcggg cggcgagctg gccatagaag gtctggccga agcccgaggc
     2941 gcggccatac cattcattgg cgtccttagg ccgaccggcc gcctcgtgcg tgcggcccag
     3001 ccagtaggca gcgcggctct tggagatgtc ggtgctgacg ccgtcataga gcgtctggaa
     3061 gtgcttttgc gcctccgcca cgcgcttgag atggcgcaat gcgatccagc cggcaaggaa
     3121 ctccgcctcg gcgaacgcaa cgcccttggt gagaccgtgc ggcaccgcga cggcataggc
     3181 gtcggcggcg cggccggcgg ccaggagatc gcgggcaagc tggttgcgtt cgttccacca
     3241 cgtgtcgttt tgattggcga caggcccggt cagcaagttc ttggcgtcat cgaggctgcc
     3301 ggtgcgacgc agccactggg cgcgctccag cttgatcgcg ggttcgtcga gccgcgccgc
     3361 cgagacgccg cgcagcacgg tcggcgcatc ggctgcccgc gtcgccatcg ccagccgcgc
     3421 gttggccacc ggctggtagt cgggcggcag cttggccaac agctcgcgcg ccacctgcgg
     3481 gcggccgtcg cgcaggatgc gatcgaagcg cgcaatgtgg tcctggccgc tcagcagctg
     3541 gccatagcgg ttcaagaagt cgttctcgtc ggatgggcgg aacgtcgcgt tctgccagct
     3601 gtcgctggcg aacttctgga catcgcccgg gctcgccgcc tgtgccgcct ccagtcgccg
     3661 catgtggcca gcgctggtga gcggcgggaa ggcggtgaag tagcggacga cgtcgcccgc
     3721 cgcagtctcc ggcgcaaggc ggtcctcggc ctgccggcgc agcacctcgg gttcgggcca
     3781 gtcgggattg tcgcgcagga agcgccaggt cgaggcgaag tcggcgtcgg tcctgggcgc
     3841 cacccgcagg atgttccagt cgacatagcg cgacagcagc ggatttttga agttcgccac
     3901 catcggccgg gcatcgccgt agcggccctc gtcgatggct tttaaggcgg cggcgaagga
     3961 agccgcctcg gcggcggtca gcggcttgga cgaggccatg gcctgcgcca tgtcgcttgg
     4021 cggcgggggc ggcatcagcc cattcgacgg accgtcctta tccaccggca gcggcgtcgc
     4081 gctcgatccg gcctggggag cggccggccg ggttggggca ttgcgctcga ctccgcgctc
     4141 cacgggcaca cgccgcacgc cggtatcggg cgcggcctgc gtcggtggat cgttgctctg
     4201 gccgcgcagg atggtgacgc caccctgctg ggcgaggaga ggctcgctcg ccagcaggcc
     4261 ggcgagcaag atgagggggg atcgaacgga cttcacgcca ggaatcgtag gcagggagtt
     4321 gcggcatcac aatggcaagt tgctcacctt gcaggggcgg aaggcgaggc ctagagtgat
     4381 tttccacaag aatcggagga agccatgttc accgggtcgc tcgtcgcgct gattaccccg
     4441 ttcaagaacg ggtcggtcga cgagaaaggc ttcgagaagt tcgtggcctg gcagatcaag
     4501 gaggggacgg acgggctggt gccctgcggc accaccggcg aatcgcccac gctctcctac
     4561 gacgagcaca cgcgggtgat cgacatctgc atcgccgccg ccaagggcag tggcgtgccg
     4621 gtgatcgccg gcaccggctc gaactcgacc gaggaggcga tcgacctcac gcggcacgcc
     4681 aagaaggccg gcgccgacgc cgccatgctg gtcgtgccct attacaacaa gccgacccag
     4741 gaaggcctgt tccagcattt caaggcggtg ggcgaggcgg tcgacatccc gatcctgctc
     4801 tacaacgtgc cgccgcgcac cggcggcgac atgcaggtcg acaccgtcgt gcggctctcc
     4861 caggtgagga acatcatcgg catcaaggac gcgagctacg acatggcacg cccgaccttg
     4921 accaagctca gggccaagaa gggcttcctg cagctctcgg gcgaggatgc cagcgcggtc
     4981 ggcttcctgg cccaaggcgg agacggctgc atctcggtga cggccaacat cgcgccgcgt
     5041 ctttgcggcg acatgcacga tgcctggaag aagcgcgacc tcgacaaggt gttcgagatc
     5101 caggaccggc tgatgcccct gcacaaggcg ctgttcatcg agaccagtcc cgcaccggtg
     5161 aagtacggcg ccgagctttt gggccaggcg agcgccaagc tgcgcctgcc gctggtcgaa
     5221 tgcacggacg ccaccaagaa gcaggtgcgc gacgccatgg tccatgccgg cctgatcaac
     5281 tagagctcct cgtgcgataa cattgtcatc ccgagcgaag cgagggacct ttagtcagcg
     5341 gcgcgaaggg tccctcgcta cgctcgcgat gacaccgagt ttggacaaaa aggcgattcc
     5401 aaattggcga aggcaccgga cctgggccgc accgtggtgg cccagaaccg caaggcgcgg
     5461 cacaactact tcatcgagga gaccttcgag gccgggctcg ccttgaccgg caccgaggtc
     5521 aagtcgctgc gcggcgggcg cagctcgatc ggcgaatcct atgtcaccga gcagggcggc
     5581 gaggcctggc tggtcaatgc caacatcccg gaatacgcct cgggcaaccg cttcaatcac
     5641 gagccgcgcc ggccgcgcaa gctgctgctg catcgcaagc agatcaacaa gctgatcggc
     5701 gccatccagc gcgagggccg caccgtcgtg ccattgcagg tctatttcaa cccacgcggc
     5761 cgcgccaaga t
//
LOCUS       DASWGA010000621         4258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2476836, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000621 DASWGA010000000
VERSION     DASWGA010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4258
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2476836"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..763)
                     /locus_tag="VF991_14570"
     CDS             complement(<1..763)
                     /locus_tag="VF991_14570"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HEX9557716.1"
                     /translation="MLQTRVNSGLDGVVVADTVMSEVDGEEGRLVVRGHALQELVSSR
                     GFESVAALLWDGYAEGGGDEATVRRGFAAARQRAFTEVPKLLAATRGLNPIEALRVGI
                     AMLPDNETTPHHYLVCGVMPVFLAALLNAEKGTAPIAPDRELTTAQDLLRMIRGQRAG
                     VVFEKALDTYLATIADHGFNASTFTARVVASTHAGLISSVLAALCALKGPLHGGAPGP
                     VLDMLDEIGEASRAEAWFDDAFAKGTTLMGFGHSVY"
     gene            863..2053
                     /locus_tag="VF991_14575"
     CDS             863..2053
                     /locus_tag="VF991_14575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HEX9557717.1"
                     /translation="MTSREAARRLGISAATLYAYVSRGLLRSEAVDGSRERRYRADDI
                     SRLKRRREVGRKAESIANHALDFGTPVLESALTLIEDGHLYYRGVDATELARTASLED
                     VARLLWECDDKPFAVDNLPPLTTALRRAWLAAATLGPVDRCLVLLPAAAALDHPSWVE
                     DRAAMLETGVRVLRLLTAAVTARPPSTLAVHQQLAAAWRVPPEHAPLLRAALVLSADH
                     EFNASAFAARVVASTGANLYGAVMAGLAALNGPRHGGLTRRVASLFDDLKTVQDLDAE
                     LARRVRDRVYIPGFGHPLYPDGDVRAVTLFALLHESVPQLPELAFAERLAGAAERLLD
                     RKANVDFTTVTVERVLGLPKDSALALFLLGRTVGWIAHALEQAAHGALIRPRARYTGP
                     RPSI"
     gene            2148..3095
                     /locus_tag="VF991_14580"
     CDS             2148..3095
                     /locus_tag="VF991_14580"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEX9557718.1"
                     /translation="MPRLPHLLGIEGLAPETISGLLDLSESYIDQNRSLDKRRDVLSG
                     RTVINLFFENSTRTRTSFEVAAKRLGADVINMDVATSSVRKGETLLDTAMTLNAMRPD
                     AIVVRHSESGAVNLLAQKVNCAVINGGDGQHEHPTQALLDALTIRRRRGSLQGLLVAI
                     CGDIMHSRVARSNIHLLQIMGARVRVVGPPTLMPTDIDRMGVEVHYSMKTGLRDVDIV
                     MMLRLQTERMQGSFVPSISEYFRFFGLDHEKLKFAKPDALIMHPGPMNRGVEIDSEVA
                     DDLDRSVIHEQVEMGVAVRMACLEALIGGRRNALAGAAA"
     gene            3187..>4258
                     /locus_tag="VF991_14585"
     CDS             3187..>4258
                     /locus_tag="VF991_14585"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Catalyzes the reversible hydrolysis of the amide
                     bond within dihydroorotate. This metabolic intermediate is
                     required for the biosynthesis of pyrimidine nucleotides;
                     Derived by automated computational analysis using gene
                     prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX9557719.1"
                     /translation="MNGTIDRTAPQHSGSTAYINARIIDPVGDAEYRGAVLISDGKIA
                     DYGPTLFASGAPYGIQSVDCRGLYLAPGLVDTRVHTGEPGEEHKETLESAGAAAAVGG
                     ITSLVLLPDNEPPFDDASLIEFVARRARQIKLVNMYAYGALTNGLEGKELAEIGLMAE
                     AGAVAFTDADHAIGNAQVLRRALYYAKGFDALIVHLPQEPTLSGGHMTSGEMATRLGL
                     AGNPPLAEVMMVERDIRLAEMTGGRLHLAKISTAEAVAAVAAAKARGLRITCDTAAPY
                     FALNDLAVGDYRTFGKLVPPLRAEKDRRAVVEGLKDGTIDAIVSDHRPQDQDSKRVPF
                     AQAEPGGIGLETLLPISLELVHN"
BASE COUNT          657 a         1502 c         1431 g          668 t
ORIGIN      
        1 tgtagacgct atgaccgaag cccatcaggg tcgtgccctt ggcgaaggcg tcgtcgaacc
       61 aggcctcggc gcgcgaggct tcgccgatct cgtccagcat gtcgaggacc gggccgggcg
      121 cgccgccatg cagcgggccc ttgagcgcgc agagcgccgc cagcaccgag gagatcaggc
      181 cggcgtgcgt ggaggccacg acccgggcgg tgaaggtcga ggcgttgaag ccgtggtcgg
      241 cgatggtcgc caggtaggtg tcgagcgcct tctcgaacac cacgccggcg cgctggccgc
      301 ggatcatgcg caggagatcc tgcgccgtcg tgagctcgcg atcgggcgcg atcggcgcgg
      361 tgcccttctc ggcattgagc agggccgcca ggaacaccgg catgacgccg cacaccaggt
      421 agtgatgcgg cgtcgtctcg ttgtcgggca gcatggcgat gccgacccgc agcgcctcga
      481 tgggattgag gccgcgcgtt gcggcgagca gcttcggcac ctcggtgaag gcgcgctggc
      541 gggccgctgc gaagccgcgc cgcacagtgg cttcgtcgcc gccgccttcg gcatagccat
      601 cccacaagag cgccgcgacg ctctcgaagc cgcgcgagct gaccagttcc tggagggcat
      661 ggccacggac gaccagccgg ccctcctcgc cgtcgacctc gctcatcacc gtgtcggcta
      721 cgacgactcc gtcgaggccg ctgttcaccc gtgtttgcag catcggtctt cctttcccgt
      781 tgtcgtcggc acggtcggtc gccagattta tattgtcaat cttgattata ttgatcaata
      841 tatcgtcatg gcgaacgatt gggtgacttc ccgggaagcg gcgcggcggc tgggcatatc
      901 ggcggcgacg ctctacgcct atgtgagccg cgggctgctg cgctcggagg cggtcgatgg
      961 cagccgcgag cggcgttacc gcgccgacga catctcgcgc ctgaagcgcc gccgcgaggt
     1021 cggccgcaag gccgagtcga tcgccaacca tgcgctcgac ttcggcacgc cggtgctcga
     1081 atcggcgctc accctgatcg aggacggcca cctttattat cgcggcgtcg atgccactga
     1141 gttggcgcgc accgcgtcgc tggaggacgt ggcgcgcctg ttgtgggagt gcgacgacaa
     1201 gcccttcgcc gtcgacaacc tgccgccgct gaccacggcg ctgcgccgcg cctggctcgc
     1261 cgccgccacg ctcggtccgg tcgaccgctg cctggtgctg ttgccggccg ccgccgcgct
     1321 cgatcatccg agctgggtcg aggatcgcgc ggcgatgctc gaaaccgggg tgcgcgtgct
     1381 gcgcctgctg acggcggcgg tgacggctcg gccgccgtcg acgctggccg tccaccagca
     1441 gctcgcggcc gcctggcggg tgccgcccga gcacgcgccg ctgttgcgcg ccgccctggt
     1501 gctgtcggct gaccacgagt tcaatgcctc ggccttcgcc gcccgcgtcg tggcctcgac
     1561 cggcgccaac ctctacggcg ccgtcatggc ggggctggcg gcgctcaatg gcccgcgcca
     1621 tggcgggctg acgcgccgcg tcgcctcgct gttcgacgac ctcaagacgg tccaagatct
     1681 cgatgccgag ctggcacgcc gggtgcgcga ccgcgtctac atccccggct tcggccaccc
     1741 gctctatccc gacggcgacg tccgggctgt caccctgttc gccctgttgc acgaatcagt
     1801 gccgcaattg cccgaactcg ccttcgccga gcggctcgcc ggcgcggccg agcggctgct
     1861 cgaccgcaag gccaatgtcg atttcaccac cgtgacggtc gaacgcgtgc tcggcctgcc
     1921 gaaggattcc gccctggcgc tgttcctgct gggtcgcacc gtgggctgga tcgctcatgc
     1981 cctggagcag gcagcgcacg gtgcgctgat ccgtccccgt gcgcgctaca ccggaccgcg
     2041 cccgagcata tgagcggacg acatcggtta tccaccaaat cgccgccttg cgggcgccac
     2101 acgagcgtgc ttaacgtcgc gctttagtga caagaaaacg cgtgggcgtg ccgaggttgc
     2161 cccatcttct cggcatcgag ggtcttgcgc ctgaaacgat ttcgggcctg ctcgatcttt
     2221 ccgaaagcta catcgaccag aaccgatcgc tcgacaagcg gcgcgacgtg ctgtcgggac
     2281 gtaccgtgat caacctgttc ttcgagaact cgacgcgcac gcggacgagc ttcgaagtcg
     2341 ccgccaagcg gctgggcgcc gacgtgatca acatggacgt cgccacctcc tcggtgcgca
     2401 agggcgagac cctgctcgac accgcgatga cgttgaacgc catgcggccc gacgccatcg
     2461 tcgtgcgcca ctcggaatcg ggcgccgtca atctgctggc ccagaaggtg aactgcgccg
     2521 tcatcaacgg cggcgacggc cagcacgagc acccgaccca ggcgctgctc gacgcgctca
     2581 ccatccgccg acgacgcggc agcctgcagg gccttctggt ggcgatctgc ggcgacatca
     2641 tgcacagccg cgtggcgcgc tcgaacatcc atctgctgca gatcatgggt gcgcgcgtgc
     2701 gcgtggtcgg cccgcccacc ttgatgccga ccgacatcga caggatgggc gtcgaagtcc
     2761 actacagcat gaagaccggc ctcagggacg tcgacatcgt gatgatgctc cggctccaga
     2821 ccgagcgcat gcagggctcg ttcgtgccct cgatcagcga atatttccgc ttcttcgggc
     2881 tcgaccacga gaagctgaaa ttcgccaagc cggacgcgct gatcatgcat cccggcccga
     2941 tgaaccgcgg cgtcgagatc gattcggaag tcgccgacga cctcgaccgc tcggtcatcc
     3001 acgagcaggt cgagatgggc gtggcggtgc gcatggcctg cctggaggcg ctgatcggcg
     3061 gccgccgcaa tgcgctggcg ggagccgcgg cgtgagcgcc cctctttgcc gggagcgcgc
     3121 cactccgtgg cgcgtcttgt tcgatcggac agcccctgag cgccacggag tggcgcgctc
     3181 ccagccatga acggcaccat cgaccgcaca gcgccgcagc acagcggatc gaccgcctat
     3241 atcaacgccc gcatcatcga tccggtgggc gatgccgagt atcgcggcgc cgtgctgatc
     3301 agcgacggca agatcgccga ctacggcccc accctgttcg cctccggcgc gccctacggc
     3361 atccagtcgg tcgactgccg cggtctttac ctggcgcccg gcctggtcga cacgcgggtg
     3421 cataccggcg agcccggcga ggagcacaag gagacgctgg agagcgccgg cgccgcggct
     3481 gcggtcggcg gcatcacctc cctggtgctg ctgcccgaca acgagccgcc gttcgacgat
     3541 gcctcgctga tcgagttcgt cgcccgccgc gcccgccaga tcaagctcgt gaacatgtac
     3601 gcttatggcg cgctgaccaa cgggctggag ggcaaggagc tggcggagat cggcctgatg
     3661 gcggaagccg gcgccgtcgc cttcaccgac gccgaccacg ccatcggcaa cgcgcaggtc
     3721 ctgcgccgcg cgctctatta cgccaagggg ttcgacgcgc tgatcgtcca cctgccgcag
     3781 gagccgaccc tgtcgggcgg ccacatgacg agcggcgaga tggcgacccg gctcggcctc
     3841 gccggcaacc cgccgctcgc cgaagtgatg atggtcgagc gcgacatccg gctggccgag
     3901 atgaccggtg gacggctgca cctcgccaag atctcgaccg ccgaagcggt cgccgccgtg
     3961 gcggcggcca aggcgcgcgg gctcaggatc acctgcgata ccgccgcgcc atattttgcc
     4021 ctgaacgacc tcgcggtcgg cgattaccgc accttcggca agctggtgcc gccgctgcgc
     4081 gccgagaagg accgcagggc ggtggtcgag gggctgaagg acggcacgat cgacgccatc
     4141 gtttcagacc atcggccgca ggaccaggac agcaagcgcg tgccattcgc ccaggccgag
     4201 ccgggcggca tcggactcga gaccttgctg ccgatctcgc tcgagctggt gcacaacg
//
LOCUS       DASWGA010000622         1529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_72415, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000622 DASWGA010000000
VERSION     DASWGA010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72415"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..1314)
                     /locus_tag="VF991_14590"
     CDS             complement(100..1314)
                     /locus_tag="VF991_14590"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557720.1"
                     /translation="MNPSEKRDSPLRDLMGVPDFLRLWLVGAFANAMRWLELLASGVF
                     AYEVTGSALAATAVVAARQLPQLAFGAFAGAISEAVNRKLIVMLALVVPAVVSTLLAT
                     LATIGHLELWQVALGNFVSGTMWATEMSTRRRMVGEVAGAHRIVPAIALDSATNAATR
                     MIGPLLGGLAFQWLGMKGAYTLTALVQFAGAFAMAGLVHPQVTRRLELAKIPGDIAEG
                     LRFARTKPTILLVYGITIVTNAFAFAYSGLVAPLGMGAFHVSPALVGLLAAGEPIGAL
                     MGGALIAAGILRMDGRLLFAGGSALFMVALIVMALSPSYWLAFAVLVIGGFGTAGFGN
                     MQTTLMLTEAPTEMRSRLMGIVTVCIGTGPLGVLAAGALAGELGPRDAVLVMASLGLA
                     ATIGLSAVLRRR"
BASE COUNT          276 a          528 c          538 g          187 t
ORIGIN      
        1 aggccatcgc ccgggaactg gcgccgcttg ccgcggccga cggcacgatt ccccaggacg
       61 ggcggcggat gattgcgatc gggcttcgcg cgacctaggt cagcgccggc gcagcactgc
      121 gctgaggcca atcgtggcgg cgaggcccag gcttgccatc accagcaccg catcgcgcgg
      181 gcccagttcg ccagccagcg cgccggcggc cagcacgccc agcgggccgg tgccgatgca
      241 gaccgtgacg atgcccatca ggcgcgagcg catctcggtg ggcgcctcgg tcagcatcag
      301 ggtcgtctgc atgttgccga agcccgccgt gccgaagcca ccgatcacca ggacagcgaa
      361 ggccagccaa taggaaggcg acagcgccat gacgatgaga gcgaccatga acagcgccga
      421 gccgccggcg aacaagagcc ggccgtccat gcgcaggatg cccgcggcga tcagcgcgcc
      481 gcccatcagc gcgccgatcg gctcgccggc cgctaaaagc ccgaccaggg cgggcgagac
      541 gtggaaggcg cccatgccga gcggcgccac aaggccggaa taggcgaagg cgaaggcgtt
      601 ggtgacgatg gtgatgccgt agaccagcag gatggtgggt ttcgtccgtg caaaacgcag
      661 gccctcggcg atgtcgcccg gaattttggc cagctcgagc cttcgcgtga cctgcggatg
      721 gacgagaccc gccatggcga aggcgccggc gaactgcacc agggcggtca acgtgtaggc
      781 ccccttcatg cccagccact ggaaggccag cccgcccagc agcgggccga tcatccgggt
      841 ggcggcattg gtggccgaat cgagcgcgat cgccggcacg atgcggtggg cgcccgcgac
      901 ctcgcccacc atgcgccgcc gcgtcgacat ctcggtggcc cacatggtgc cggagacgaa
      961 gttgcccagc gccacctgcc acagctcgag gtggccgatg gtggcaagcg tcgccagcag
     1021 agtcgagacg acggccggca cgacgagcgc cagcatgacg atcagcttgc ggttgaccgc
     1081 ttcggagatc gcgccggcga aggcgccgaa ggcgagctgc ggcagctggc gcgcggccac
     1141 gacggcggtc gcggccagcg ccgagccggt gacctcgtag gcgaacacgc cggaagccag
     1201 cagctcgagc cagcgcatgg cgttggcgaa ggcgccgacc agccacagcc gcaggaaatc
     1261 cggcacgccc atcaagtcgc ggagcgggct gtcgcgtttc tccgagggat tcattgagga
     1321 acaagctact ccgctggggg cgcgcgactc cacaggcgaa gtaaacttcg ctcgtgtcgc
     1381 gcgtctttgc ccgtttcgac ggatgatccg cgccactggc gggcacactg cgttcaacga
     1441 acttcgggga aacgcatgaa aagacgcagc ctgcttgccg ccgcgcttgc cgcgcccgcc
     1501 atcgcccgcg cccaggcatc gtggccgac
//
LOCUS       DASWGA010000623         2064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1334090, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000623 DASWGA010000000
VERSION     DASWGA010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1334090"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..487)
                     /locus_tag="VF991_14595"
     CDS             complement(<1..487)
                     /locus_tag="VF991_14595"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX9557721.1"
                     /translation="MKWPDRRLLDLFGIDHPIVQAPMAGFTSPAMTVAVSDAGGLGSV
                     AGAMATSESLRSELQIVSQGTGRSYSVNFFTHPQPEPDAAREKSWRQRLAPYYREFGL
                     ASDAGTGGPIRAPFNAALCDVLLEFKPKVASFHFGLPDASLLKRLKAERIVVVSSATT
                     VE"
     gene            555..917
                     /locus_tag="VF991_14600"
     CDS             555..917
                     /locus_tag="VF991_14600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9557722.1"
                     /translation="MMHGSTTVLTVKDIMESLTYYRDKLGFDVAFEYGKPIFYVGLCS
                     GEVTLHLIAASQTPRQPGHGAVSIIVDDVDALHADLMKRGAKVLKAPKDYDYGLRDFD
                     VADLDGNMIFFGMESKKV"
     gene            1011..>2064
                     /locus_tag="VF991_14605"
     CDS             1011..>2064
                     /locus_tag="VF991_14605"
                     /inference="COORDINATES: protein motif:HMM:NF005687.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9557723.1"
                     /translation="MELWQYDATDLARLIRIGQASAHEAVDSVLARLRKVNPAINAVV
                     RVLEEEARTASETADAARARGHALPPLHGVPVTTKVNVDQAGLPTDNGVVPLKDFTAQ
                     EDSPVVANLKHAGAIIVGRTNAPAFSMRIFTDNALHGRTLNPRDPSVTPGGSSGGAGA
                     ATATGIGAIAHGNDIGGSVRIPAYCNGVVGLRTGFGRIPSFNPSAPQGRPIGAVLMAV
                     QGPHTRTVRDARLALQAMARGDRRDWRWNDVPMQGPPPARPIKVAIVPEVPGGATHPA
                     QAAAVRQAGKHLQGAGYVVEEVLPPDMERGVELWHMICVTDVFAGLWPQMQKMGDPDG
                     ITSMKGWLDLYKPADLA"
BASE COUNT          360 a          703 c          690 g          311 t
ORIGIN      
        1 cctcgacggt cgtggccgag ctgacgacga cgatcctctc ggccttcagg cgtttcagca
       61 gggaagcgtc gggtaggccg aaatgaaagc tcgctacctt gggcttgaac tccagcagca
      121 catcgcagag cgctgcattg aacggcgcgc gtatcggtcc gcccgtgccg gcatcggacg
      181 ccaggccgaa ctcgcggtag tacggcgcca ggcgttggcg ccagcttttc tcgcgcgcgg
      241 catccggctc tggctgggga tgggtgaaga agttgacgct ataagaccgg cccgtgcctt
      301 ggctcacgat ctgcagttcc gaacgcaggc tctcagacgt cgccatggcg cccgcgaccg
      361 accccaggcc gcctgcgtcg gagacagcaa cggtcatggc gggcgacgtg aatcccgcca
      421 tcggcgcctg aacgatggga tggtcgatgc cgaacaggtc gagcaaacgg cggtcgggcc
      481 acttcatggg cttcctcctc caacaggtcg gagtctagca tgctatggcc cgacttcgac
      541 ccagggagag cgccatgatg cacggcagca ccaccgtcct cacggtaaaa gacattatgg
      601 agagcctcac ctattaccgc gacaagctcg gcttcgacgt cgccttcgaa tacggcaagc
      661 ccatcttcta tgtcggcctg tgctcgggcg aggtcacgct ccacctgatc gccgccagcc
      721 aaacgccgcg ccagcctggt cacggcgccg tcagcatcat cgtcgatgac gtcgatgccc
      781 tgcacgccga cctgatgaag cgcggtgcga aggtgctcaa ggcgccgaag gactacgatt
      841 acgggctgcg cgacttcgac gttgccgacc tcgacggcaa catgatcttc ttcggcatgg
      901 aatcgaagaa ggtttagctg tcatcctgag cgcagcgaag gatctcatgc cggtgacaag
      961 cggcgatgag gtccttcgct ccgctcagga cgacaaaaag gaacgaattc atggaactct
     1021 ggcaatacga cgcgaccgat ctcgcgcgcc tcatccgcat cggacaagcc tcggcgcatg
     1081 aagccgtcga ttcggtgctg gcccgcctgc gcaaggtcaa tccggcgatc aacgccgtgg
     1141 ttcgggtgct ggaggaagaa gcgcgcaccg cctccgagac ggccgatgcc gcccgcgcgc
     1201 gcggccatgc cctgccgccg ctgcacggcg tgccggtgac gaccaaggtc aacgtcgacc
     1261 aggcggggct gccgaccgac aacggcgtcg tgccgctcaa ggatttcacg gcgcaggagg
     1321 acagcccggt cgtcgccaac ctgaagcacg ccggcgccat catcgtcggc cgcaccaatg
     1381 cgccggcctt ctccatgcgc atcttcaccg acaacgcgct gcacggccgc acgctcaacc
     1441 cgcgcgatcc ctcggtaacg ccgggcggct cgagcggcgg cgcgggcgcg gcgacggcca
     1501 ccggcatcgg cgccatcgcg catggcaacg acatcggcgg ctcggtgcgc atcccggcct
     1561 attgcaatgg cgtggtcggc ttgcgcaccg ggttcggccg catcccctcc ttcaacccca
     1621 gcgcgccgca gggccggccg atcggcgcgg tgctgatggc ggtccagggg ccgcacaccc
     1681 gcacggtgcg cgatgcgcgg ctggcgttgc aggcgatggc gcgcggcgac cggcgcgact
     1741 ggcgctggaa cgacgtgccg atgcaggggc cgccgccggc gcggccgatc aaggtggcga
     1801 tcgtgcccga ggtgccgggc ggcgccacgc atccggcgca ggccgccgcg gtgcgccagg
     1861 ccggcaagca tttgcagggg gcgggctacg tcgtcgagga agtgctgccg cccgacatgg
     1921 agcgcggcgt cgagctctgg cacatgatct gcgtcaccga cgtcttcgcc ggcctgtggc
     1981 cgcagatgca gaagatgggc gatcccgacg gcatcacctc gatgaagggc tggctcgacc
     2041 tgtacaagcc ggcggacctc gcga
//
LOCUS       DASWGA010000624         1581 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_319968, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000624 DASWGA010000000
VERSION     DASWGA010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319968"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1086
                     /locus_tag="VF991_14610"
     CDS             <1..1086
                     /locus_tag="VF991_14610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017487046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9557724.1"
                     /translation="GQTPADIAATMRGLLVAANQQPELAGVFSTFAADTPQIYLDIDR
                     DKAQVLGVKVSDIFNALQSTLGGYYVNDFNLFGRTWQVNIESEERFRDAIEDIYRVYV
                     RNSAGAMVPIRALAQARLVQGPQVVIRYNGFRGAVINGAPKPGFSSGQALAAMERISA
                     ATLPPGYGFEWTATALQEKTASGQTGIVLGLAILFAYLFLVALYESWNIPLPVLLSVS
                     VGVLGAIACVALAGLAFDVYAQIGLVVLVALAAKNGILIVEFAVEQRRHGKEILDSAV
                     EGARLRFRPVAMTSFAFILGLLPLVIAAGAGAASRRAVGTPVFGGMIAAAVFGIFVIP
                     MLYVVFQRLRERVARRPAASEARATSD"
     gene            complement(1184..>1581)
                     /locus_tag="VF991_14615"
     CDS             complement(1184..>1581)
                     /locus_tag="VF991_14615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9557725.1"
                     /translation="DGELEVIDTSLYYNRVFKKDYAVALNLTGTAVDDPDVTFFEGYA
                     CGSLRNYNNYCDAEMTKLFEEQSRELDPKKRLKMVWEIDRKLQEDIARPIIVHNRAAG
                     CWQPYVKGVTIQVNSIYNGWRFEDIWLDR"
BASE COUNT          236 a          540 c          506 g          299 t
ORIGIN      
        1 gggcagacgc cggccgatat cgccgcgacg atgcgcggcc tcctggtagc ggccaatcag
       61 cagcctgaac tggccggcgt cttcagcacc tttgcggccg acacgccgca gatctatctc
      121 gacatcgacc gcgacaaggc acaggtgctg ggcgtcaagg tgagcgacat cttcaacgcc
      181 ctgcagtcga ccctgggcgg ctactacgtc aacgacttca acttgttcgg ccggacctgg
      241 caggtcaaca tcgagtccga agagcgcttt cgcgacgcca tcgaggacat ctaccgcgtc
      301 tatgtccgca acagcgccgg cgccatggtg ccgatccgcg cgcttgccca ggccaggctc
      361 gtccaggggc cgcaggtcgt cattcgctac aacggcttcc gcggcgccgt catcaacggc
      421 gcgcccaagc ccggcttcag ttccggccag gcgctggccg ccatggagag gatttcggcc
      481 gcgacgctgc cgcccggcta cggcttcgaa tggaccgcca ccgccttgca ggagaagacg
      541 gcgagcggcc agaccggcat cgtgctcggc ctcgccatcc tgttcgccta tctcttcctg
      601 gtggcgctct acgagagctg gaacattccc ctgcccgtgc tgctctcggt cagcgtcggc
      661 gtgctgggcg cgatcgcctg cgtggccttg gctggcctcg ctttcgacgt ctatgcccag
      721 atcggcctgg tggtgctggt ggcgctcgcc gccaagaacg gcatcctgat cgtggaattc
      781 gccgtcgagc agcggcgcca cggcaaggag atcctcgact cggccgtcga gggcgcgcgc
      841 ctgcgcttcc ggccggtggc gatgacgagc ttcgccttca tcctgggcct gctgcccctg
      901 gtcattgccg cgggcgccgg cgccgccagc cggcgcgcgg tcggcacgcc ggtgttcggc
      961 ggcatgatcg ccgccgccgt gttcggcatc ttcgtcattc ccatgctgta cgtcgtcttc
     1021 cagcgcctgc gcgagcgcgt cgcccgccgt cccgcggcat cagaggcgcg cgccaccagc
     1081 gactgacttc attgctggga gcgcgccact ccgtggcgca tcatgatctt ccgtatgact
     1141 atgagatgac gcgccacgga gtggcacgct cccagcaaag actctaccga tcgagccaga
     1201 tgtcctcgaa gcgccagccg ttgtagatgc tgttgacctg gatggtgacg cccttgacgt
     1261 agggctgcca gcatcccgcc gcccggttgt ggacgatgat cggccgggcg atgtcctcct
     1321 gcagcttgcg gtcgatttcc cacaccatct tcaggcgctt tttcgggtcg agctcgcgcg
     1381 actgttcctc gaacagcttg gtcatctcgg cgtcgcagta gttgttgtag ttgcgcagcg
     1441 agccgcaggc gtagccctcg aagaaggtga cgtcgggatc gtcaaccgcc gtgccggtga
     1501 ggttgagcgc caccgcatag tccttcttga agacgcggtt gtagtagagc gaggtgtcga
     1561 tcacttcgag ctcgccgtcg a
//
LOCUS       DASWGA010000625         2064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2477256, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000625 DASWGA010000000
VERSION     DASWGA010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2477256"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..645
                     /locus_tag="VF991_14620"
     CDS             <1..645
                     /locus_tag="VF991_14620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEX9557726.1"
                     /translation="RYTFNYDSMKELNEGLQMRSDWLLPLCTGAERLKGEDGRKAHPT
                     QKPEALLFRCIMAASNPGNTILDPFFGTGTTGAVARRLGRRFIGLERDPDYAAIARKR
                     IAQVQPLSPEDVLPMPSKRSEPRIPFGVLIEAGLLQPGTLLSDLSGRLHARVRADGTL
                     SAANALGQHRGSIHQVGAAVQGAPACNGWTFWHFEQAGARLPIDHLRQQVRAGL"
     gene            complement(642..1697)
                     /gene="mutY"
                     /locus_tag="VF991_14625"
     CDS             complement(642..1697)
                     /gene="mutY"
                     /locus_tag="VF991_14625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011160019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEX9557727.1"
                     /translation="MTITHASRLLAWYDRHRRTLPWRAPAGERTEPYLVWLSEIMLQQ
                     TTVATVGDYFRRFVERWPTVEALAEAPLDHVLSAWAGLGYYARARNLHACARAVAERH
                     DGRFPEDEASLLALPGIGRYTAAAIRAIAFDQPASAVDGNVERVIARLFAIDTPLPDA
                     KPEIQLRAAKLVPESRAGDYAQAMMDLGATVCTPKSPRCVICPLMSSCRARKLGLAED
                     LPRRSPKAERPTRRGLAFVLARRDGAILLRKRPAKGLLGGMDEVPSSAWREGKLVAAD
                     ALAEAPVPARWQILDGLVRHTFTHFHLELTVARATATTDRLARLAPGTSWCTVDRMTE
                     RALPTLMRKVIAHAVKD"
     gene            1744..>2064
                     /locus_tag="VF991_14630"
     CDS             1744..>2064
                     /locus_tag="VF991_14630"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HEX9557728.1"
                     /translation="MRENGFRAIGGLAQRLTSGIAKGRGASIARLRAEWTAIVGPELA
                     RITRPEALLSGRGARAGANGAGKALRLRVPGASALEIQHKTGQLVERVNAYFGHKMID
                     DIRLV"
BASE COUNT          320 a          719 c          727 g          298 t
ORIGIN      
        1 cgctacacct tcaactacga ttcgatgaag gaattgaacg agggcctgca gatgcggtcc
       61 gactggctgc tgccgctttg caccggggcc gagcgcctga aaggcgagga cggcaggaag
      121 gcgcatccga cgcagaagcc cgaggccttg ctgttccgct gcatcatggc cgcgtccaat
      181 cccggcaaca cgatcctcga tccttttttc ggcaccggca ccaccggcgc agtggcgcgc
      241 cggctcggcc ggcgcttcat cggcctggag cgcgatcccg actatgccgc catcgcccgg
      301 aaacgcatcg cccaagtcca gccgcttagc cccgaggacg tcttgccgat gcccagcaag
      361 cgcagcgagc cgcgcatccc gtttggcgtc ctgatcgagg cgggactgct gcaaccgggc
      421 acgctgctga gcgacctcag cggccgcctg cacgcccgag tacgcgccga cggcacgctg
      481 tcggcggcca atgcgctggg ccagcatcgc ggctcgatcc atcaggtggg cgcggcggtc
      541 cagggcgcgc cggcctgcaa cggctggacg ttctggcact tcgagcaggc aggcgcgcgc
      601 ctgccgatcg accatctgcg ccagcaggtg cgggcaggtc tctagtcctt cacggcgtgc
      661 gcgatcacct tgcgcatcag cgtcggcaag gcgcgctcgg tcatgcgatc gaccgtgcac
      721 cagctcgtgc cgggcgcgag cctggccagc cggtcggtcg tggccgtggc acgcgccacg
      781 gtgagctcga gatggaaatg cgtaaaagtg tggcgcacca gcccgtcgag gatctgccag
      841 cgcgccggca ccggcgcctc ggcaagggca tcggcagcca ccagcttgcc ctcgcgccag
      901 gcgctcgacg gcacctcgtc catgccgcct aaaagaccct tggccggccg cttgcgcagc
      961 aggatggcgc cgtcgcggcg ggccagcacg aaggcaagcc cgcggcgcgt cggcctttca
     1021 gccttgggcg aacgccgcgg caggtcttct gccagcccga gtttccgcgc gcggcaactc
     1081 gacatcagcg ggcagatgac gcagcgcggg cttttgggtg tgcacacggt ggcgccgaga
     1141 tccatcatcg cctgcgcgta gtcgccggcg cggctctccg gtaccagctt ggccgcgcga
     1201 agctggatct ccggcttggc gtcgggcagc ggcgtgtcga tggcgaacag ccttgcgatc
     1261 acccgctcga cattgccgtc gaccgcggag gccggctggt cgaacgcgat ggcgcggatg
     1321 gccgccgccg tgtagcggcc gatgccgggc agcgccagca ggctcgcctc atcttcggga
     1381 aagcgaccgt cgtgtcgctc ggccacggcc cgggcgcagg catggagatt gcgggcgcgg
     1441 gcgtagtagc cgaggcccgc ccaggccgag agcacatggt cgagcggcgc ctcggccaga
     1501 gcctcgaccg tgggccagcg ctcgacgaag cggcggaaat agtcgccgac cgtggccacg
     1561 gtggtctgct gcagcatgat ctccgacagc cacaccaggt agggctcggt ccgctcgccg
     1621 gccggcgcgc gccacggcag ggtgcgacga tgtcggtcgt accaggcaag caatcgtgag
     1681 gcgtgggtaa tggtcatgta aggggccgtg ccctaccata aggaacggag tttgaaaggg
     1741 tccatgcggg aaaacggctt ccgtgccatc ggcggtctgg cccagcggct cacatccggc
     1801 atcgccaaag gccgcggcgc ctcgatcgcg cggttgcgcg ccgagtggac ggccatcgtc
     1861 ggtcccgagc tggcgcgcat cacccggccc gaggcgctgc tgtcgggccg cggcgcgcgt
     1921 gccggcgcca atggggccgg caaggcgctc cgcctgcgcg ttccgggcgc ctcggcgctc
     1981 gagatccagc acaagaccgg ccagctcgtc gagcgcgtga acgcctattt cggccacaag
     2041 atgatcgacg acatccgcct ggtg
//
LOCUS       DASWGA010000626         2596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_590464, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000626 DASWGA010000000
VERSION     DASWGA010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_590464"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="VF991_14635"
     CDS             <1..526
                     /locus_tag="VF991_14635"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEX9557729.1"
                     /translation="ALPSITRDDPDWYVALVLNHILGGGGQQSRLFTEVREKRGLAYG
                     ASSSLRSYRRAALLVISTASANERVAEAIRVVRAELARLRTDGPTEQEVTDAKTYLSG
                     ALALSLDSSGAVASLLHSMQVDNLAPDHLTKRANLIAVVKIDDVRRLARRLLREEVLT
                     TVVVGKPVGITADP"
     gene            542..2332
                     /gene="mutL"
                     /locus_tag="VF991_14640"
     CDS             542..2332
                     /gene="mutL"
                     /locus_tag="VF991_14640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEX9557730.1"
                     /translation="MNVLRRLPSTLVNRIAAGEVVERPASAVKELVENAIDAGARRIA
                     VTLKEGGRTFIAVVDDGVGLSPEELSLAVERHCTSKLPDDDFGNIRTLGFRGEALPSI
                     ASVSRFAITSRPAGASSAWTLEIDGGAKGEPRPAAHPLGTRVEVRDLFFATPARLKFL
                     KEPRTEAGHVADAMRRLAMAHPAIAFRLDSEERPLIDLAAAGPSLLEKADAARLERLA
                     AIMGREFADNALAIDANREGFRLTGFAGLPTLNRPTSQHQYLFVNGRPVRDKLLAGAV
                     RGAYQDFLARDRHPMVALFLEAPAGMVDVNVHPAKTEVRFRDAGIVRGLIVGALRTAL
                     AAAGHRASTTVADAALGAFRPHTGYSSPLPMGGGGASMPRGLAETAAQFMAPLGVPSA
                     RVEEAANGNGAHYPLGVARAQLHETYIVAQTDHGVVIVDQHAAHERLLHERLKDQLQA
                     DGVKRQALLLPEVVDVGEDGARRLATRAAELADMGLVLEPFGLGAVVVRETPAVLGEV
                     DIQGLVRDLADELAEMGDHLSLKEKVEEVCGTLACHTSVRAGRRLSVEEMNALLRQME
                     ATPHSGQCNHGRPTYVELKLADIERLFGRR"
     gene            2329..>2596
                     /locus_tag="VF991_14645"
     CDS             2329..>2596
                     /locus_tag="VF991_14645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557731.1"
                     /translation="MTRLLPALLLLAIAAAAAAQPASPLDGQWRGTSDGGSCNAPLDY
                     ALTIDYGIVDGSAYDTTARGPVPNPRHAAPPAATPGLWQIHGLAK"
BASE COUNT          368 a          940 c          905 g          383 t
ORIGIN      
        1 ggccctgccc agcatcaccc gcgatgatcc cgactggtac gtggccctgg tgctcaatca
       61 cattctgggt ggcggcggcc agcagtcacg gctgttcacc gaggtgcgcg aaaagcgcgg
      121 gctggcctat ggcgcgtcgt cgagcctgcg cagctaccgc agggccgccc tgctggtgat
      181 ctcgacggcc tctgccaacg agcgcgtcgc cgaggcgatc cgcgtggtcc gcgccgagct
      241 cgcgcgcttg cgcaccgacg ggccgaccga gcaggaggtg accgacgcca agacttatct
      301 cagcggcgcg ctcgcgctgt cgctcgattc gtccggtgcg gtggcgagcc tgctgcactc
      361 catgcaggtc gacaatcttg cgcccgatca cctgaccaaa cgtgccaacc tgatcgccgt
      421 ggtcaagatc gacgacgtcc gccggctcgc ccgccggctg ctgcgcgagg aagtcctcac
      481 cacggtcgtg gtcggcaagc ccgtgggcat cacggccgat ccctagtaga gtgacggcgt
      541 catgaacgtg cttcgccgtc tgccgtcgac cctcgtcaac cgcatcgccg ccggcgaggt
      601 ggtcgagcgt ccggcgagcg cggtcaagga gctggtcgag aacgccatcg acgccggcgc
      661 gcggcgcatc gccgtcaccc tgaaggaagg cggccggacc ttcatcgccg tggtcgacga
      721 tggcgtcggc ctgtcgcccg aggagctcag cctggcggtc gagcggcatt gcacgtcgaa
      781 gctgccggac gacgatttcg gcaacatccg caccctgggg tttcgcggcg aggcgctgcc
      841 ctcgatcgcc tcggtcagcc gctttgccat cacctcgcgg ccggccggtg cctcgtcggc
      901 ctggacattg gagatcgacg gcggcgccaa gggcgagccg cggcccgccg cccatccgct
      961 gggcacgcgg gtcgaggtgc gcgacctttt cttcgccacg ccggcgcggc tcaagttcct
     1021 caaggagccg cgcaccgagg cgggccacgt cgccgacgcg atgcggcggc tcgccatggc
     1081 gcatcccgcc atcgcctttc gcctcgacag cgaggagcgc ccgctgatcg acctggcggc
     1141 ggccggaccc tcgctcctgg agaaggccga tgcggcgcgg ctcgagcggc tggccgcgat
     1201 catgggccgc gagttcgccg acaacgcgct tgcgatcgat gccaaccgcg agggcttccg
     1261 gctcacaggc ttcgccggcc tgccgacgct caatcggccg accagccagc accagtatct
     1321 gttcgtcaac ggccggcctg tgcgcgacaa gcttttggcc ggcgcggtgc gcggcgccta
     1381 ccaggatttc ctggcgcgcg accgccatcc catggtggcg ctgttcctcg aggcgcccgc
     1441 cggaatggtc gacgtcaacg tccatcccgc caagaccgaa gtgcgctttc gcgatgccgg
     1501 catcgtgcgc ggcctgatcg tgggcgcgct ccgcaccgcg cttgccgccg ccggccatcg
     1561 cgccagcacg acggtggccg atgccgcctt gggcgccttc cgtccgcaca ccggctattc
     1621 gtcgcccttg ccgatgggcg gcggcggcgc atcgatgccg cgcgggcttg ccgaaactgc
     1681 cgcgcaattc atggcgccgc tcggcgttcc gtcggcgcgc gtggaagagg cggcgaacgg
     1741 caacggcgca cactacccgc tgggtgtggc gcgcgcgcag ttgcacgaga cctatatcgt
     1801 cgcccagacc gaccacggcg tggtgatcgt cgatcagcac gccgcccacg aacgcctgct
     1861 gcatgagcgg ctgaaggatc agctccaggc cgacggcgtg aagcgccagg cgctgctgct
     1921 gcccgaggtc gtcgacgtgg gcgaggacgg cgcgcgacgg ctggccaccc gcgccgccga
     1981 gctggccgac atgggcctgg tgctcgagcc gtttggcctg ggcgccgtgg tggtgcgcga
     2041 gacgccggcg gtcttgggcg aagtcgacat ccaggggctg gtgcgcgacc tcgccgacga
     2101 gctggccgag atgggcgatc acctgtcgct caaggagaag gtcgaggagg tgtgcggcac
     2161 cttggcctgc cacacctcgg tgcgcgccgg acggcggctg agcgtcgagg agatgaacgc
     2221 gctgttgcgc cagatggagg cgacgccgca ttccggccag tgcaatcacg gccggccgac
     2281 ctatgtcgaa ctcaagctgg ccgacatcga gcggctgttc ggaagacgat gacgcgcctc
     2341 ctgccggctt tgctgctgct cgccatcgcc gccgccgccg ccgcccagcc cgcttcgccg
     2401 ctcgacggcc aatggcgcgg cacgagcgac ggcggctcgt gcaacgcgcc gctcgattac
     2461 gcgctgacca tcgactacgg catcgtcgac gggtcggcct acgacaccac ggcccgcggc
     2521 ccagtgccca acccgcgcca tgcggcgccg ccggcggcga cccccgggct gtggcagatc
     2581 cacggcctgg ccaagg
//
LOCUS       DASWGA010000627        10864 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1596313, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000627 DASWGA010000000
VERSION     DASWGA010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10864
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1596313"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VF991_14650"
     CDS             <1..426
                     /locus_tag="VF991_14650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557732.1"
                     /translation="WAGAGALLVGTGMGFCNTTYLVSVQAAAALRDRGAATASNMFMR
                     IVGQSVGAALFGALVNLGLMRHAAQGDVAERLMAPLLRQSLGTAEIMTLTEAMASALR
                     NVHVVGALIGLVVLALATRLPRALSPATLPDEKVSGHRR"
     gene            complement(466..924)
                     /locus_tag="VF991_14655"
     CDS             complement(466..924)
                     /locus_tag="VF991_14655"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF025008.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9557733.1"
                     /translation="MSTLLERLAEVRKSGDVARLAEAIPYARWMRIAPENGTGELLTR
                     MRYHDDLIGNTFLPAIHGGTLGAMLEMAAIFHLLWETETEAVPKIVNITVDYLRSARP
                     VDVIASAKVTKQGRRMVNVFAEAWQDDRSKPVATANAHFLVTSADEPSAL"
     gene            complement(921..1433)
                     /locus_tag="VF991_14660"
     CDS             complement(921..1433)
                     /locus_tag="VF991_14660"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9557734.1"
                     /translation="MANPTNPLADRAQRLALFQMWFSDTIPHSKALGIKIVDARRGFA
                     SMRLDWREELVGNPETGVLAGGPLTALLDGCCGMSVATLLKEPKPFATLDLRIDYVKP
                     ATPGQAVIAEAECYRITHSVAFTRAFAHHGDAKDPIAAAAGTFMLGTKGEVTRPQSIG
                     SEAMVLETKS"
     gene            complement(1438..2619)
                     /locus_tag="VF991_14665"
     CDS             complement(1438..2619)
                     /locus_tag="VF991_14665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9557735.1"
                     /translation="MAVGESAQPHLPEAVPASPFYTEEHEAFRSTVRRFVEREIMPHV
                     DQWDEAEEFPRELYRKAAAAGLLQLGFPEEYGGVPTDPFFGIIKAEEMARHASGGLNA
                     SLNSHTIGSPPIAALGPEWMKRKVLPEVLAGEKISALAITEPSGGSDVANLKTTARRD
                     GDHYVVNGSKMFITSGMRADYYTVAVRTGGPGAGGVSLLLIERDRAGFGRTKLKKMGW
                     WASDTAQLFFDDVRVPVDNLIGQENKGFIGIMLNFNQERLGMAAGACGYAKVCLDEAI
                     AYARERHTFGKPLIANQVVRHRLVDMAMRINAVKSTLELLAWRVGQGEKPVAEICMLK
                     NLAASTLEFCANEAMQVFGGAGYLRGAKVERIYRETKVMSIGGGSVEIMKDLAARQMG
                     L"
     gene            2759..3619
                     /locus_tag="VF991_14670"
     CDS             2759..3619
                     /locus_tag="VF991_14670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557736.1"
                     /translation="MQLTLNGLAVGCIYGLVALGFVLIYKATELVNFAQGDLLMLGAF
                     VAYMAVVWWGLDYWLAFLISVVTIGALGALLDAVVLRRVIGQPQFAIVMLTIGLGAMF
                     RTFASVTWGSEIYTLPTPFGGVTTIGDVTLSHQYLSIIVGTLILCGALYAFFNHTRLG
                     VAMQATSQNQLAAYYMGIPVKLIFSLIWAISAGVAAAAGILLAPVTLIDINMGLAVAL
                     KAFAAAVLGGFGSIPGALVGGIIIGLIELYAGATLPDGFKDTAPYIVLLLMLIVRPQG
                     LFGMLTRKKV"
     gene            3629..4771
                     /locus_tag="VF991_14675"
     CDS             3629..4771
                     /locus_tag="VF991_14675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557737.1"
                     /translation="MRFLFKTSYAQDIRLFRDNVDASWYGLLGVAVLALPFLLSEYYV
                     GETTWVFIYAICGISLMVLVGYTGLVSLGHAAFLGIGAYAHAFFLKHGMPWIPSVVLA
                     VLITTASGLVVGLPALRMTGIYLAIATLAFSVIIQEVFSRWESVTHGFAGMPVAKPTI
                     LGVPFDDDRSFYYLCLFFLVLALWLTRNLLRSPTGRAWIAIRDSEIAAQSMGVNLAIY
                     KSMAFAYSAALMGLAGALFAHKIAYLAPDIFTILLSIQFLLLVIVGGLGSLHGAVFGA
                     IFVALLPPVIAILRDSIPQSMAEAAAATGIAPIGILGEAVGNFLRKPGVEAGIFGLIL
                     VLVILLEPLGMYGRWVKIRIFFSTFPMYKSATFKRQKSYMRSERLR"
     gene            4768..5526
                     /locus_tag="VF991_14680"
     CDS             4768..5526
                     /locus_tag="VF991_14680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557738.1"
                     /translation="MSFFTADSLSINFGGIKAVDDVSFAVEKGEVFTIIGPNGAGKTT
                     IFNLVSRIYEPTGGKLAFDGADITNVAPHRIAALGIARTFQNIELFEHATLLQNLLLA
                     RHAHKKSSFFSELLFLPSVQRMELEHREAVEKAIDFLDLQQYRDSFIVNLPYGVRKVT
                     ELARALCTDPKLLLLDEPSSGLNVEETEDMAFWIQDIRDLLGITVLMVEHDMSLVSAV
                     SDRVLALNYGRPIAMGTPAEVQAHPEVVRAYLGG"
     gene            5534..6307
                     /locus_tag="VF991_14685"
     CDS             5534..6307
                     /locus_tag="VF991_14685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557739.1"
                     /translation="MSDPILKVTNVETYYGPIMAIRGVSFEVPRGGIVTILGANGAGK
                     TTVLKTVCGVMDPQKGSVAFEGREIRGVDPDKVMRLGISHVPEGREVFPFLSVRENLR
                     MGAYTRRDADGVAQDLEAVFGYFPVLRERADQRAGSLSGGEQQMLSISRALMARPRLM
                     LLDEPSLGLSPKLVKDIFDIVVRINRELGVTILLVEQNANMALQTADFGYVLEVGRIV
                     MADTCARLMQKEDIKEFYLGIKEQGARGQRRWKKRKTWR"
     gene            6334..8169
                     /locus_tag="VF991_14690"
     CDS             6334..8169
                     /locus_tag="VF991_14690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX9557740.1"
                     /translation="MAGLDGRIEIEGCDTIPKLFWHQVKVRDGRTAFREKQLGIWRAT
                     SWRDYGERARWTGMGLAKLGLRRDEVVSIMAETVPEWLYADMGTMGAGGVSNGIYPTD
                     SAKQVDYVLNDSRSRFLFVENDEQLDKFIDVRERCPRIAKVFVFDMEGLADFSDPLVM
                     PFDELLALGRAHDAAHPGLWEELIAGSKAHELALLVYTSGTTGPPKGVMLSHRNVVFQ
                     LRNIDAFIPIGIDDEQLAFLPLCHIAERTFTVFLPLRSGAIANFAESAETVPANIREV
                     APTTFFAVPRIWERFYSGIAIRMREATWIGRTAYRWALGIGLQVAEAELAGRQPSAVL
                     KGLHRVADFLVLDNIKRAIGMHRVGFAGTGAAPIAPDLIKWYRALGVDMREVYGQTEN
                     CGLATGMPNRIKLGTVGITAPNTQSKISPDGEILLKGPHVFMGYLNQPQKTAETLRDG
                     WLHTGDVGYVDNEGYIKITDRMKDIIITAGGKNITPSEIENQLKFSPYISDAVVIGDQ
                     RKFLSCLIMIDYDNVAKHAQDSNVPFTDFTSLCRSREVNELIWSEIERVNQGFARVET
                     IKKFRLIEQQLTAEDDELTPTMKLKRKFVNEKYRGMIDGMYAEAG"
     gene            8204..9376
                     /locus_tag="VF991_14695"
     CDS             8204..9376
                     /locus_tag="VF991_14695"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557741.1"
                     /translation="MNKSTMGLGLAMAAASLVAVAGASAQTRGVTPTEVLLGMPTDLS
                     GVAATYGVSSSNGVKMRFDEVNEAGGVNGRKIRVIIEDQGYQVPKAVQACNKLINRDK
                     VFAFVAPLGTPMNNACFKDQFAAGVPNLFPLSAARSMYEPYERLKFYSAASYVDQVRA
                     GISYFVKTKGKKAICVMYQDTDFGKEVLEGAEIQAKKLGVKLVETAAHKPTDQDFSAP
                     ISKLRSAGCDLIIMGTIVRDSIVPYTTARKGGWTDVDFLGSAAVYDLVVGAAQGMDGF
                     YGMGLTEMPYVDSSVASVKTFVENYKKKFNVDPNIGAVYGYVAADLTYQGLKNAGKDL
                     TLDSFVKGLEAIKGYKDIFNGPEVNFGPNIRQGANSSFLAEVKGGRWTRVTQPLGF"
     gene            complement(9442..9816)
                     /locus_tag="VF991_14700"
     CDS             complement(9442..9816)
                     /locus_tag="VF991_14700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557742.1"
                     /translation="MAKLAGVVLAALAALSVAACTTTTGRGQGGGQAGSGLQPAVAPP
                     GMTAAQGAAYCSKLAQSYAEYVGTVGGYLGGSTTGGQAADLDARVAIAQCQDGNYASG
                     IPVLQQKLRDARVTVPPPPTAG"
     gene            9880..10668
                     /locus_tag="VF991_14705"
     CDS             9880..10668
                     /locus_tag="VF991_14705"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9557743.1"
                     /translation="MSGELSGRVAIVTGGASGIGAATAALLAGHGARVVVADLQEATD
                     GPGRFVHHDVASEGSWKSLLADLLANEGRLDIVVNNAGITGGMGNPETTTVEAWQRVQ
                     AINSEGVFLGCKYAIQGMKKTGPDKPNAKGSIVNISSIAGLVGGAGPTAYSASKGAVR
                     LLSKSVALYCAEQKYDIRCNSVHPGGVDTPIFNPLWQAIGREQGKAFLGSRHPIGRMA
                     EPAELGEVVLWLASDRSSFVSGAEIVADGAITSGLQRRPLLAAR"
     gene            10655..>10864
                     /locus_tag="VF991_14710"
     CDS             10655..>10864
                     /locus_tag="VF991_14710"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9557744.1"
                     /translation="MPRVDGKVVLVSGGASGIGAATARLVVQEGGKAVLADRDEAKGR
                     ALAAELGGAAQFVALDVTDEMAWQKA"
BASE COUNT         1819 a         3625 c         3508 g         1912 t
ORIGIN      
        1 tgggccgggg cgggcgcgct gctggtcggc accggcatgg gcttctgcaa caccacctat
       61 ctcgtgtcgg tccaggcggc agcggcgctg cgcgaccgcg gcgccgccac cgcttcgaac
      121 atgttcatgc gcatcgtcgg ccagtcggtc ggtgcggcgt tgtttggcgc cttggtcaat
      181 ctcggcctca tgcgccacgc cgcgcagggc gacgtggcgg aacggctgat ggcgccgctg
      241 ctgcgccaga gcctcggcac agccgagatc atgacgctta ccgaagccat ggcatcagcc
      301 ctcaggaacg ttcatgtcgt gggagcgctg atcgggctcg tcgtcctcgc tctggcgacc
      361 cggttgccgc gtgcgctgag cccggccacc ttgccggacg agaaggtttc cggccaccgc
      421 cgctgagggc gacggtcaaa gtggcgatcg tcaaagtgac gattgtcaaa gtgcggaggg
      481 ctcatccgcc gacgtcacca ggaagtgggc gttggcggtg gcgaccggct tggagcggtc
      541 gtcctgccag gcctcggcga agacattgac catgcgcctg ccctgcttgg ttaccttggc
      601 cgaggcgatg acgtcgaccg ggcgcgccga gcgcaggtag tcgaccgtga tgttgacgat
      661 cttgggcacc gcctcggttt cggtctccca caacagatga aagatcgccg ccatctccag
      721 catggcgccc aatgtgccgc catggatcgc cggcaggaac gtgttgccga ttaggtcgtc
      781 gtgatagcgc atgcgggtca aaagctcgcc ggtgccgttc tccggcgcga tccgcatcca
      841 gcgcgcatag gggatcgcct cggcgagccg ggccacgtcg cccgatttgc gcacttcggc
      901 caggcgctcg agcagcgtgc tcatgacttg gtctccagga ccatcgcctc gctgccgatc
      961 gactgcgggc gcgtgacctc acccttggtg cccagcatga aggtgccggc ggcggcggcg
     1021 atcgggtcct tggcgtcgcc gtgatgggcg aaggcgcggg tgaaggcgac cgagtgcgtg
     1081 atgcggtagc actccgcctc ggcgatcacc gcctggcccg gcgtcgcggg cttcacatag
     1141 tcgatgcgca ggtcgagcgt ggcgaacggc ttgggctcct tcagcaaagt cgccaccgac
     1201 atgccgcagc agccgtcgag cagggccgtc agcggtccac cggccagcac gccggtctcg
     1261 ggattgccga ccagctcctc ccgccagtcc agccgcatgg aggcaaagcc acgccgcgcg
     1321 tcgacgatct tgatgcccag cgccttgctg tgggggatgg tgtcggagaa ccacatctgg
     1381 aacagcgcca aacgctgcgc gcggtcggcc aggggattgg ttggattggc cattgctcta
     1441 aagacccatc tgccgcgccg cgagatcctt catgatctcg accgagccgc cgccgatcga
     1501 catcaccttg gtctcgcgat agatgcgctc gaccttggcg ccgcgcaggt agcccgcgcc
     1561 gccgaacacc tgcatcgcct cgttggcgca gaactccagg gtcgaggccg cgaggttttt
     1621 cagcatgcag atctcggcca ccggcttctc accctgcccg acccgccagg ccaaaagctc
     1681 gagcgtcgat ttcacggcgt tgatacgcat cgccatgtcg accaggcgat ggcgcacgac
     1741 ctggttggcg atcagcggtt ttccgaaggt gtggcgctcg cgggcatagg cgatcgcctc
     1801 gtcgaggcag accttggcgt agccgcaggc gccggccgcc atgccgagcc gctcctggtt
     1861 gaaattcagc atgatgccga tgaagccttt gttctcctgg ccgatcaggt tgtcgaccgg
     1921 cacccgcaca tcgtcgaaga acagctgggc agtgtcggac gcccaccagc ccatcttctt
     1981 gagcttggtg cgcccgaaac ccgcgcggtc gcgctcgatc agcagcagcg acacgccgcc
     2041 ggcgcccggc ccgccggtac gcacggcgac ggtgtagtaa tcggcgcgca tgcccgaggt
     2101 gatgaacatc ttggagccat tgaccacata atgatcaccg tcgcggcgcg ccgtggtctt
     2161 gaggttggcg acatcggagc cgcccgacgg ctcggtgatg gcaagcgcgc tgatcttctc
     2221 gcccgccagc acctcgggca ggaccttgcg cttcatccat tccggtccga gcgcggcaat
     2281 cggcggggag ccgatcgtgt ggctgttgag gctggcgttc agccctccgc tggcgtggcg
     2341 cgccatttcc tcggccttga tgatgccgaa gaacggatcg gtcggcacgc cgccgtactc
     2401 ttcgggaaag cccagttgca gaagccctgc ggcggctgcc ttgcgataga gctcgcgcgg
     2461 gaactcctcg gcttcgtccc actggtcgac gtgaggcatg atttcacgct cgacgaagcg
     2521 gcggacggtg ctgcggaagg cttcgtgctc ttcggtgtaa aacgggcttg ccggcaccgc
     2581 ctcgggcaaa tgcggctggg ctgactctcc aacggccatc gggcgcctcc tgctccgttg
     2641 ttacacttta ccggatcgtc gcctagcgcg ttgacagcgc tgaacagctg ttcatattgg
     2701 taggcaacaa ggcggcagca gaccgcccga cagcaggggt tggacactgg ttatttttct
     2761 gcaactcacc ctcaacgggc ttgcggtcgg ctgcatctat ggcttggtcg cgttgggttt
     2821 cgtgctgatt tacaaggcaa cggagctcgt caacttcgcc cagggcgatc tgctcatgct
     2881 gggcgccttc gtcgcctaca tggcggtggt ctggtggggg ctcgactact ggctcgcctt
     2941 cctgatctcc gtggtgacga tcggcgccct cggcgcgttg ctcgatgccg tggtgctgcg
     3001 ccgggtgatc ggccagccgc aattcgccat cgtcatgttg acgatcgggc tgggcgccat
     3061 gttccgcacc ttcgccagcg tcacctgggg ttcggagatc tacaccctgc cgactccgtt
     3121 cggcggcgtg accaccatcg gcgacgtcac gctcagtcac cagtatctgt cgatcatcgt
     3181 cggcacgctg atcctgtgcg gcgcgcttta cgccttcttc aatcacacgc ggctcggcgt
     3241 cgccatgcag gcgacatcgc agaaccagct cgctgcctat tacatgggca tcccggtcaa
     3301 gttgatcttc tccctgatct gggcgatctc ggccggcgtg gcggcggccg ccggcatcct
     3361 gctcgcccca gtaaccttga tcgacatcaa catgggactt gccgtcgcgc tgaaagcctt
     3421 cgccgcggcg gtgctgggcg gcttcggctc gatcccgggc gcactggtcg gcggcatcat
     3481 catcggcctc atcgagctct atgccggcgc taccctgccc gacggcttca aggacacggc
     3541 gccctacatc gtgctgctgc tcatgttgat cgtccggccg caaggcctgt tcggcatgtt
     3601 gacccgcaag aaagtgtagg cgcgggcgat gcgtttcctg ttcaaaacgt cctacgcgca
     3661 ggacatccgc ctgttccgcg acaatgtcga cgcctcgtgg tacggcctgc tcggcgtggc
     3721 cgtgctcgcg ctgcccttcc tgctttccga atactatgtc ggcgagacga cctgggtgtt
     3781 catctacgct atctgcggga tctcgctgat ggtgctggtc ggctataccg gactggtctc
     3841 gctgggacac gcggcattcc tcggcatcgg cgcctacgct cacgccttct tcctgaaaca
     3901 tggcatgcca tggatcccgt cggtggtcct ggccgtgctg atcaccacgg cctccggact
     3961 tgtggtcggc ctgccggcgc tgcgcatgac cggcatctac ctcgccatcg ccacgttggc
     4021 tttctcggtg atcatccagg aggtgttcag tcgatgggaa tcggtgacgc acggcttcgc
     4081 cggcatgccg gtggccaagc cgacgatcct cggcgtgccc ttcgacgacg accgctcgtt
     4141 ctactacctc tgcctgttct tcctggtgct ggcgctgtgg ctgacgcgca acctcctgcg
     4201 ctcgccgacc ggccgcgcct ggatcgccat ccgtgacagc gagatcgccg cccagtcgat
     4261 gggggtgaat ctcgcgatct acaaatccat ggctttcgcc tactcggccg ctctgatggg
     4321 cctcgccggc gccctgttcg cgcacaagat cgcctatcta gcgcccgaca tcttcaccat
     4381 cctgctgtcg atccagttcc tgctgctggt catcgtgggc gggctgggct ccctgcacgg
     4441 cgcggtgttc ggcgcgatct tcgtggccct tttgccgccg gtcatcgcca tcctgcgcga
     4501 ttcgattccg cagagcatgg ccgaggccgc ggcggccacc ggcattgcac cgatcggcat
     4561 cctgggcgag gcggtcggca acttcctcag gaagcccggc gtggaagccg gcatcttcgg
     4621 cctgatcctg gtgctggtga tcctgctcga gccgctcggc atgtacgggc ggtgggtcaa
     4681 gatccggatc ttcttctcga ccttcccgat gtacaagagc gccaccttca agcgccagaa
     4741 gagctacatg cggtcggagc gcctgcgatg agcttcttca ccgcggacag cctctccatc
     4801 aacttcggcg gcatcaaggc tgtcgatgac gtgagcttcg ccgtcgagaa gggcgaggtc
     4861 ttcaccatca tcggccccaa cggcgccggc aagaccacca tcttcaacct ggtgagccgc
     4921 atctacgagc cgaccggcgg caagctggcc ttcgacggcg ccgacatcac caatgtggcg
     4981 ccgcaccgca tcgcagcact cggcatcgcc cgcaccttcc agaacatcga gctgttcgag
     5041 catgcgacct tgctgcagaa cctcctgctg gcgcggcatg cgcacaaaaa atccagcttc
     5101 ttctccgagc tgctgttcct gccgtcggtg cagcgcatgg agctcgagca tcgcgaggcc
     5161 gtcgagaagg ccatcgactt cctcgacctg cagcaatacc gcgacagctt catcgtcaac
     5221 ctgccctacg gcgtgcgcaa ggtgaccgag ctcgcccgcg cgctgtgcac cgatcccaag
     5281 ctgctgctgc tcgacgaacc gtcctccggc ctcaatgtcg aggaaaccga ggacatggcc
     5341 ttctggatcc aggacatccg cgacctttta ggcattaccg tgctgatggt cgagcacgac
     5401 atgagcctgg tctcggcggt gtccgatcgg gtgctggcgc tgaactacgg ccggccgatc
     5461 gccatgggca cgccggccga ggtgcaggcc catcccgaag tcgtccgcgc ctatctcggg
     5521 ggctgaagcg acgatgtcgg atcccatcct caaggtcacc aatgtcgaga cgtactatgg
     5581 gccgatcatg gccatccgcg gcgtctcgtt cgaggtcccc aggggcggca tcgtcaccat
     5641 cctgggcgcc aacggcgccg gcaagaccac ggtgctcaag accgtctgcg gcgtcatgga
     5701 cccgcagaag ggcagcgtcg ccttcgaggg ccgcgagatc cgcggcgtcg atcccgacaa
     5761 ggtcatgcgg ctcggcatca gccatgtgcc ggagggccgc gaggtcttcc cgttcctgag
     5821 cgtgcgcgag aatttacgca tgggcgccta cacccgccgc gacgccgacg gcgtcgccca
     5881 ggatctcgag gcggtgttcg gctatttccc ggtgctgcgc gagcgcgccg accagcgcgc
     5941 cggttcgctg tcgggcggcg agcagcagat gctctcgatc agccgggcgc tgatggcgcg
     6001 gcccaggctg atgctgctcg acgagccctc gctcggcctc tcgcccaagc tggtgaagga
     6061 catcttcgat atcgtcgtgc gcatcaaccg cgaactgggc gtcaccatcc tgctggtcga
     6121 gcagaacgcc aacatggcgc tgcagaccgc cgatttcggt tacgtgctcg aggtcggccg
     6181 catcgtcatg gccgacacct gtgcgcggct gatgcagaag gaagacatca aggaattcta
     6241 tctcggcatc aaggaacagg gcgcgcgcgg acagcggcgc tggaagaagc gcaagacatg
     6301 gcgatagcga accgggagat gacggagagc gcgatggcgg gcctggacgg gcggatcgag
     6361 atcgaaggct gcgacacgat tcccaagctg ttctggcatc aggtcaaggt gcgggacggc
     6421 cgcaccgcct tccgcgagaa gcagctcggc atctggcgcg ccacctcgtg gcgcgactac
     6481 ggcgagcgcg cgcgctggac cggcatgggc ctggcgaagc tcggcctcag gcgcgacgag
     6541 gtcgtgtcga tcatggccga gacggtgccc gaatggctct acgccgacat gggcaccatg
     6601 ggcgccggcg gtgtgagcaa cggcatctat ccgacagact cggccaagca ggtcgactac
     6661 gtcctgaacg acagccgttc gcgcttcctg ttcgtcgaga acgacgagca gctcgacaag
     6721 ttcatcgacg tgcgcgaacg ctgcccgcgg atcgccaagg tcttcgtctt cgacatggaa
     6781 ggcctcgccg atttcagcga cccgctggtc atgccgttcg acgaactgct ggcgctcggc
     6841 cgcgcgcacg atgcggcaca tcccggcctg tgggaggagc tgatcgccgg ctccaaggcc
     6901 cacgagctcg ccctgctggt ctatacctcc ggcaccaccg gcccgcccaa gggcgtaatg
     6961 ctgtcgcacc gcaacgtcgt tttccagttg cgcaatatcg acgccttcat cccgatcggc
     7021 atcgacgacg agcagctcgc cttcctgccg ctctgccaca tcgccgagcg caccttcacc
     7081 gtcttcctgc cgctgcgctc gggcgccatc gccaacttcg ccgagagcgc cgagacggtg
     7141 cccgcgaaca tccgcgaggt ggcgccgacc accttcttcg ccgtgccgcg catctgggag
     7201 cgcttctatt ccggcatcgc catccgcatg agggaagcga cctggatcgg ccgcaccgcc
     7261 taccggtggg cgctcggtat cggtctccag gtcgccgagg ccgagctggc cggccgacag
     7321 ccctcggccg tcctcaaagg actgcaccgc gttgccgact tcctggtgct ggacaacatc
     7381 aagcgcgcca tcggcatgca tcgcgtgggc ttcgccggca ccggcgccgc gccgatcgcg
     7441 cccgacctga tcaagtggta tcgcgcgctc ggcgtcgaca tgcgcgaggt ttacggtcag
     7501 accgagaatt gcggcctggc aaccggcatg cccaaccgca tcaagctcgg caccgtcggc
     7561 atcaccgcgc ccaacaccca gtcgaagatc tcgccggacg gcgagatcct gctgaaaggg
     7621 ccgcacgtct tcatgggcta cctgaaccag ccgcagaaga cggcggagac cttgcgcgac
     7681 ggctggctgc acaccggcga tgtcggctat gtcgacaacg agggctacat caagatcacc
     7741 gaccgcatga aggacatcat catcactgcg ggcggcaaga acatcacgcc ctcggagatc
     7801 gagaaccagc tcaaattctc gccctacatc tccgacgccg tggtgatcgg cgaccagcgc
     7861 aagttcctgt cctgcctgat catgatcgac tacgacaacg tcgccaagca cgcccaggac
     7921 agcaacgtgc cgttcaccga cttcacttcg ctgtgccgct cgcgcgaggt caacgaactg
     7981 atttggtcgg agatcgagcg ggtcaaccag ggcttcgcgc gggtcgagac gatcaagaag
     8041 ttccggctga tcgagcagca gctcaccgcc gaggacgacg agctcacgcc aacgatgaag
     8101 ctcaagcgca agttcgtgaa cgaaaagtac aggggtatga tcgacggcat gtatgccgaa
     8161 gcgggctagt ccgctatagt ctcaaccggc aagggaggaa acgatgaaca agtcgacaat
     8221 gggtcttgga ttggcgatgg ccgcggcatc gcttgtggct gtggcgggcg cctcggcgca
     8281 gacgcgcggc gtgacgccga ccgaagtgct gctcggcatg cctaccgacc tgtcgggcgt
     8341 ggcggcgacc tacggcgtct cctcgtcgaa cggcgtgaaa atgcgcttcg acgaggtcaa
     8401 cgaggcgggc ggcgtcaacg gccgcaagat ccgcgtgatc atcgaggacc agggctatca
     8461 ggtgcccaag gccgtgcagg cctgcaacaa gctgatcaac cgcgacaagg tgttcgcctt
     8521 cgtggcgccg ctcggcacgc cgatgaacaa tgcctgcttc aaggaccagt tcgccgccgg
     8581 cgtgcccaac ctgttcccgc tgtcggccgc gcgctcgatg tacgagccct atgagcgact
     8641 gaaattctac agcgcggctt cctacgtcga ccaggtgcgt gccggcatca gctacttcgt
     8701 caagaccaag ggcaagaagg ccatctgcgt gatgtaccag gataccgact tcggcaagga
     8761 agtcctggaa ggcgccgaaa ttcaggccaa gaagctcggc gtcaagctcg tcgagacggc
     8821 cgcgcacaag cccaccgacc aggacttcag tgcgcccatc agcaagctgc gctcggctgg
     8881 ctgcgacctg atcatcatgg gcaccatcgt gcgcgattcg atcgtgccct atacgacggc
     8941 acgaaagggc ggctggaccg acgtcgactt cctgggttcc gcggcggtct atgacctggt
     9001 ggtcggcgcg gcgcagggca tggacggctt ctacggcatg ggcctcaccg agatgcccta
     9061 cgtcgacagc agcgtcgcct cggtcaagac cttcgtcgag aactacaaga agaagttcaa
     9121 tgtcgatccc aacatcggcg cggtctacgg ctacgtcgcc gccgacctga cctatcaggg
     9181 actgaagaac gccggcaagg acctgacgct cgacagcttc gtaaagggcc tcgaagccat
     9241 caagggctac aaggacatct tcaacggccc cgaggtcaat ttcggcccca acatccgcca
     9301 gggcgcgaac tcctcgttcc tcgccgaagt gaagggcggg cgctggacac gggtcacgca
     9361 gccgctcggc ttctagcctg cgctgccacg cagcaagaag cccgggcggg caaccgcccg
     9421 ggcttttctt tgccggcggc gtcagccggc cgtcggcggt ggcggcaccg tgaccctggc
     9481 gtcgcgcagc ttctgctgca gcacggggat gccggaggcg tagttgccgt cctggcactg
     9541 ggcgatggcg accctggcgt cgaggtcggc ggcttggccg ccggtggtcg agccgccgag
     9601 atatccgccg accgtgccga catactcggc gtaggactgg gcaagcttgg agcagtaggc
     9661 ggcgccctgg gctgccgtca tgcccggcgg cgcgacggcg ggctgcagtc cggaccccgc
     9721 ctgtcctccg ccctggcctc ttcccgttgt cgtggtgcag gctgccactg acagcgccgc
     9781 gagtgcggcc agaacgactc ccgcgagctt cgccatgcga tcctcccttg tccgacagac
     9841 tactggaacc gagcggtgct cgctatggtc gcagccaaca tgagtggtga actttcggga
     9901 agggtcgcga tcgtcacggg cggtgcgtcg ggcatcggcg cggcgacggc agcgctgctg
     9961 gcaggccacg gcgcgcgagt cgtcgtggcc gatcttcagg aggccacgga cggacccggc
    10021 cgttttgtgc accacgacgt cgcctcggaa gggtcctgga aatccctgct ggccgacctg
    10081 ctggccaacg agggccgtct cgacatcgtg gtcaacaacg ccggcatcac cggcggcatg
    10141 ggcaaccccg agacgaccac cgtcgaggcc tggcagcgcg tacaggcgat caactccgaa
    10201 ggcgtctttc tcggctgcaa gtacgccatc cagggcatga agaagaccgg cccggacaag
    10261 cccaacgcca agggctcgat cgtcaacatc tcatcgatcg cgggcctggt cggcggcgcc
    10321 ggaccgaccg cctactcggc gagcaagggc gcggtgcggc tgttgagcaa gagcgtggcc
    10381 ctctattgcg ccgagcagaa atacgacatc cgctgcaatt cagtgcatcc cggcggcgtc
    10441 gacacaccga tcttcaatcc gctgtggcaa gccataggtc gcgagcaggg caaggcgttc
    10501 ctggggtcgc gccatccgat cggccgcatg gccgagcctg ccgagctggg cgaggtcgtg
    10561 ctgtggctgg cgtcggaccg ctcgagtttc gtgagcggcg cggagatcgt ggccgacggc
    10621 gccataacct ccggcctgca gaggaggccg cttcttgccg cgcgttgacg gcaaggtcgt
    10681 gctggtaagc ggcggcgcct cgggcatcgg cgcggcgacc gcgcgactgg tcgtgcagga
    10741 gggcggcaag gctgtgctgg ccgaccgcga cgaagccaag ggccgcgccc tcgccgccga
    10801 gctcggcggc gcggcgcagt tcgtcgctct cgacgtcacc gacgagatgg cctggcagaa
    10861 ggca
//
LOCUS       DASWGA010000628         6580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_446099, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000628 DASWGA010000000
VERSION     DASWGA010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6580
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446099"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1389
                     /gene="lpdA"
                     /locus_tag="VF991_14715"
     CDS             <1..1389
                     /gene="lpdA"
                     /locus_tag="VF991_14715"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX9557745.1"
                     /translation="VVIGAGPGGYVAAIRAAQLGMTVAMVEKRATLGGTCLNVGCIPS
                     KALLQSSHLFEQAGHDLGVHGIVLGPPKLDFAQMMKRKGEVVDGSVKGVAFLFRKNKI
                     TTFQGTGRIDKAGSVVVLGEGGAVKETLAAKNILIASGSDVTPLPGVAIDENKIVSST
                     GALDLADVPKHLIVIGAGIIGLELGSVWRRLGSEVTMVEFLDRIAPGVDDEITRQLHR
                     SLQKQGLKFKLGSKVTKAETTASGVTLTVEPAKGGAAETLQADIVLVAVGRRPFVEGL
                     GLDKAGVKLTQHGRIAVDAHFQTSVPGIYAIGDVIDGPMLAHKASEDGIACVETMAGQ
                     KGHVNWDLVPSVIYTQPEVAWVGKTEEQLKAAGVAYKVGKYPFTADPRSRANAATEGF
                     VKVLADKATDKVLGVHIIGAEAGTMIAEAGLAMEFAASAEDIGRVCHAHPTVNEAMKE
                     AALAAWEKPIHL"
     gene            1397..1663
                     /locus_tag="VF991_14720"
     CDS             1397..1663
                     /locus_tag="VF991_14720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557746.1"
                     /translation="MRKLVAALAIAACLVMAVVGGLLPILQGWIFFVVALYLLATEFE
                     TGRLWVKTARRHWPFLNRWIVRARHHKWAPSHLREFEDLTDPTK"
     gene            1697..2269
                     /locus_tag="VF991_14725"
     CDS             1697..2269
                     /locus_tag="VF991_14725"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9557747.1"
                     /translation="MDKPVTPRGINHLVLNVRDIEESHRFWTEIVGFKQVGQLTPTAD
                     RPNPPKMRFYSGDRDGETHHHDIALVENRDLPAPPADWKMFGMPVAINHIAITMPDRD
                     SWLRHLAYLQAKGVKFDRRVEHGMTHSLYIHDPNGYGVEFVYDLPKEVWQGDIDGALN
                     WVKVLPTEGAEALEDRTQGIPTFRKTEAAK"
     gene            2374..3144
                     /locus_tag="VF991_14730"
     CDS             2374..3144
                     /locus_tag="VF991_14730"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9557748.1"
                     /translation="MRLPVEQAGRTVQLAAQLFRPTGATDPVPAVAIFHGCGGPGQNT
                     ARMAGLVASWGYAALVVDSFSARGLKDVCGRNWPTQADAETRAHDIDGALAWLGKQSY
                     IDPKRLAVMGYSYGGGVALLRALSPRLDNNAPPPARAAILVYPDCALADALGAKLAVR
                     QPTLFAMAALDDWTPVSQCKAVIERVVQGRDLVETRIYDGAHHSFDALGLPVRYLDGV
                     GNRSKPGGCCGAHYGANEAAWHAFVADVKAFLTKAFGR"
     gene            3195..3374
                     /locus_tag="VF991_14735"
     CDS             3195..3374
                     /locus_tag="VF991_14735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557749.1"
                     /translation="MTKEVFGKHMVWTEHPTTRAHIGIGYSSLAEAEHEAVKLEHAGY
                     KILRITPTTLPKPNS"
     gene            complement(3384..4319)
                     /locus_tag="VF991_14740"
     CDS             complement(3384..4319)
                     /locus_tag="VF991_14740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003582767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEX9557750.1"
                     /translation="MTTLEAAREAWRDWLKSERRLAGHTLVAYEHDVAAFLAFMTSYL
                     GGPPSLQALTKLKPAEFRAWLAERARRGLARTSTARAFSSVRSFFAFLDKRGLAHNAS
                     IGAIQTPKLPRSVPKALSERDMEDVLDAAPGQERAAWIDLRDGAILLLLYGAGLRIGE
                     ALGLTKSMVEGLLKASQDTLSVTGKGNKMRLVPLLPQVLEALKAYRNACPYTAALGPR
                     DAFFVGARGGPLDPAIVQKRVRDIRRALGLADSVTPHALRHSFATHLLGAGGDLRTIQ
                     ELLGHASLSTTQRYTDVDSARLIDVYRRAHPRARG"
     gene            complement(4328..5059)
                     /locus_tag="VF991_14745"
     CDS             complement(4328..5059)
                     /locus_tag="VF991_14745"
                     /inference="COORDINATES: protein motif:HMM:NF016243.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 family protein"
                     /protein_id="HEX9557751.1"
                     /translation="MGSDGTIPAPDGSGRQIKVITADDVVAYLKTHPDFFERHAELAE
                     MMALTPKARGPGVIDMQQAILKRLRSEIDRLKNERTEIVANSKQNQIVQNRIQAAVIS
                     IIQATTFEKMIHVVTHELPELLDVDFITLAIEANADAPKRVPVRGVYVLAPGAIDAAI
                     GPDKHARLRASIAGEEAFFGEVARFVKSDVLMRLRVSSGSPDGVMCFGSRDPEAFGPE
                     QATELLFFLAKVLENTIRAWLDLPE"
     gene            complement(5169..5315)
                     /locus_tag="VF991_14750"
                     /pseudo
     CDS             complement(5169..5315)
                     /locus_tag="VF991_14750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582525.1"
                     /note="similar to novel fructose-6-phosphate aldolase from
                     Escherichia coli; enzyme from Methanocaldococcus janaschii
                     shows transaldolase activity; incomplete; partial in the
                     middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
     gene            5425..>6580
                     /locus_tag="VF991_14755"
     CDS             5425..>6580
                     /locus_tag="VF991_14755"
                     /inference="COORDINATES: protein motif:HMM:NF016724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX9557752.1"
                     /translation="MENPGQPSPLRRTVRVLLPLPLADAYDYSVPDGLDVAAGHFVVV
                     PLGKRETVGVVWGEGSGEVAPEKLRDVEHVLPALPMADALRRFVDWVAAYTLAPPGAV
                     LRMAMSVPSALEAPKTEIVYRAAATTGDSALKLTAARRRVLEQLKEGPALPAAELAHI
                     AGVGTSVIKTMAAVGLVEGIERTMRRSFARPDGRRQGPALSPEQAVAAQGLVDKVLAH
                     AFSATLLDGVPGAGKTEVYFEAIAAALAAGRQVLVLLPEIALTAQWLKRFEDRFGALP
                     ASWHSGLTSLERRETWRAIAEGRVGVVVGARSALFLPFATLGLIVVDEEHDSSFKQDE
                     GVTYNARDMAVVRARLVSAPIVLASATPSLESVVNVSAGRYGALHLPARHG"
BASE COUNT         1065 a         2202 c         2248 g         1065 t
ORIGIN      
        1 gtcgtgatcg gcgccggtcc gggcggctat gtggcggcga tccgcgccgc gcagcttggc
       61 atgacggtgg cgatggtcga aaagcgcgcc accctgggcg gcacctgcct caatgtcggc
      121 tgcatcccct ccaaggcgct gctgcaatcc tcgcatctgt tcgagcaggc ggggcacgat
      181 ctcggcgtac atggcatcgt gctcggcccg cccaagctcg acttcgccca gatgatgaag
      241 cgcaagggcg aggtcgtcga cggctccgtc aagggtgtcg ccttcctgtt ccgcaagaac
      301 aagatcacga cctttcaggg cacgggacgt atcgacaagg cgggctcggt cgtcgtcctg
      361 ggcgagggcg gggcggtgaa ggagacgctc gcggcgaaga acatcctgat cgcctcgggc
      421 tccgacgtga cgccgctgcc cggcgttgcc atcgacgaga acaagatcgt gtcgtcgacc
      481 ggcgcgctcg acctggctga cgtgcccaaa catctgatcg tgattggcgc cggcatcatc
      541 gggttggagc tgggctcggt atggcggcgg ctggggtcgg aggtgacgat ggtcgagttc
      601 ctcgaccgca tcgcgcccgg tgtcgacgac gagatcacca ggcagctcca ccgctcactg
      661 cagaagcagg gcctgaagtt caagctggga tcgaaggtca ccaaggccga gacgactgct
      721 tcgggcgtca cgctgacggt ggaacctgcc aaaggcggcg cggccgagac gttgcaggcc
      781 gacatcgtgc tggtcgccgt cggtcggcgg cccttcgtcg aggggctggg cctcgacaag
      841 gccggcgtga agctcaccca acatggccgc attgccgtcg atgcccattt ccagacctcg
      901 gtgcccggca tctatgcgat cggcgacgtg atcgacgggc cgatgctggc ccacaaggcg
      961 agcgaggacg gcatcgcctg cgtcgagacc atggccggcc agaagggcca tgtgaactgg
     1021 gatctcgtgc cctcggtgat ctacacccag cccgaggtgg cctgggtcgg caagaccgag
     1081 gagcagttga aggcggccgg ggtcgcctac aaggtcggca aatatccctt caccgccgat
     1141 ccgcgcagcc gcgccaacgc cgccaccgag ggtttcgtga aggtgctggc cgacaaggcg
     1201 accgacaagg ttttgggcgt gcatatcatc ggcgccgaag ccggcaccat gatcgccgaa
     1261 gcggggcttg ccatggagtt cgccgcctcg gccgaggata tcggccgcgt ctgccacgcc
     1321 catccgacgg tcaacgaggc gatgaaggag gcggcgctgg cggcatggga aaagccgatt
     1381 cacctctgag cagctgatgc gcaagctggt ggcggcgctg gcgatcgcgg cctgtctggt
     1441 catggcggtg gtgggtggcc tgctgcccat cctgcagggc tggatcttct tcgtggtcgc
     1501 gctctatctg ctcgccaccg agttcgagac cggccggcta tgggtaaaaa ccgcccgccg
     1561 ccactggccg ttcctcaacc gctggatcgt ccgcgcccgc catcacaaat gggcgcccag
     1621 ccatttgcgc gaatttgagg atctgacaga tccgacgaaa tagcggtatc atggcccggc
     1681 aagtgcagga gtcaccatgg acaagccagt caccccacgc ggcatcaacc acctcgtgct
     1741 caatgtgcgt gacatcgagg aatcgcatcg cttctggacc gagatcgtgg gtttcaagca
     1801 ggtcggccaa ctgacgccga cggccgaccg cccgaacccg cccaagatgc ggttctacag
     1861 cggcgatcgc gacggcgaga cgcatcatca cgacatcgcg ctggtcgaga accgcgacct
     1921 gccggcgccg cccgccgact ggaagatgtt cggcatgccg gtcgcgatca atcacatcgc
     1981 catcacgatg ccggaccgcg attcctggct tcgccacctc gcctacctgc aagccaaggg
     2041 cgtgaagttc gaccgccgag tcgagcatgg catgacccac agcctctaca tccacgatcc
     2101 caacggctat ggcgtcgaat tcgtctacga cctgcccaag gaagtctggc agggcgacat
     2161 cgacggcgca ctgaattggg tcaaggtcct gcccaccgag ggcgccgagg cgctcgagga
     2221 tcgcacgcaa ggaatcccga ccttccgcaa aaccgaggcg gcaaaataag aacagcgact
     2281 gcgactggcc gcagcatttg gcagggggcg gcctggctgt tctgggcggc cttagcgggc
     2341 cttcctgcca acgcaacctt ggcccagcag aacgtgcgat tgcctgttga gcaggctggc
     2401 cgcacggtgc agctcgccgc gcagctcttc cgtccaaccg gtgctaccga cccggtgccg
     2461 gccgtcgcga tcttccacgg ctgcggcggg ccgggccaga acaccgcgcg catggccggc
     2521 ctcgtcgcgt cgtggggcta cgccgcgctg gtcgtcgaca gcttctccgc gcgcggcctc
     2581 aaggatgtgt gcggccgcaa ctggccgacc caggccgatg ccgagacgcg ggcacacgac
     2641 atcgatggcg cactcgcctg gctcggtaag cagagctaca tcgatcccaa gcggctcgcc
     2701 gtcatgggct attcctacgg cggcggcgtc gccctgctgc gcgcgctgtc gccgcgcctc
     2761 gacaacaacg cgccgccacc ggcgcgcgcg gcgatcctgg tctatcccga ctgcgcgctg
     2821 gccgatgcct tgggcgccaa gcttgccgtc cgccagccca ccctgttcgc catggccgcg
     2881 ctcgacgact ggacgccggt ttcgcaatgc aaggccgtga tcgagcgcgt cgtgcaaggc
     2941 cgcgacctcg tcgagacgcg catctacgac ggcgcccatc actccttcga cgcgctcggc
     3001 ctgccggtgc gctatctcga cggcgtcggc aaccgcagca agcccggcgg ctgctgcggc
     3061 gcccattacg gcgccaacga ggcggcgtgg cacgctttcg tggccgacgt gaaagccttt
     3121 ttgaccaagg cattcgggcg ctgaacggcg atctccggtc gcgccggccg gaaaaggtcg
     3181 ctatagaggc gcgcatgaca aaagaagtat tcggcaagca tatggtgtgg accgagcacc
     3241 cgacgaccag agcccacatt ggcattggtt attccagcct cgccgaggcg gagcacgaag
     3301 cggtcaagct cgagcacgcg ggctacaaga tcctgaggat caccccgacg accttgccga
     3361 agcccaactc ctgacgggtc gggctacccc ctggctcgcg gatgcgccct ccggtagacg
     3421 tcgatgagac gggcggaatc gacgtcggtg tagcgttgcg tcgtcgacag cgaggcgtgg
     3481 cccaaaagct cctggatggt cctgagatcg ccgccggcgc ccagaagatg ggtggcgaag
     3541 gaatggcgca gcgcatgcgg cgtcacgctg tcggccagcc ccagggcgcg gcggatgtcg
     3601 cgcacgcgct tttgcacgat cgcggggtcg agcggcccgc cgcgggcgcc cacgaagaaa
     3661 gcgtcgcgcg gtccgagggc cgccgtatag gggcaggcgt tgcgataggc ttttagcgcc
     3721 tccagcacct gcggcagcaa cgggaccagc cgcatcttgt tgcccttgcc ggtgacgctg
     3781 agcgtgtcct gactcgcctt caggagaccc tcgaccatgg acttggtgag gccgagcgcc
     3841 tcgccgatgc gcaggcccgc gccatagagc agcagcagga tcgctccgtc gcgcaggtcg
     3901 atccaggcgg cgcgctcctg tccgggcgcc gcatcaagca catcctccat gtcgcgttcg
     3961 gaaagcgcct tgggcaccga gcgcggcagc ttgggcgtct ggatggcgcc gatgctggca
     4021 ttgtgcgcca gcccgcgctt gtcgaggaag gcaaagaagg agcgcaccga tgagaacgcc
     4081 cgcgccgtcg acgtgcgggc gaggccccgg cgcgcccgct cggccagcca ggcgcggaac
     4141 tcggccggct tcagcttggt cagcgcctgg aggctgggcg gtccgccgag atagctggtc
     4201 atgaaagcca ggaacgccgc gacgtcgtgc tcgtaggcga ccagcgtgtg gccggcgagg
     4261 cggcgttcgc ttttcagcca gtcccgccac gcctcgcgcg ccgcctcgag ggtggtcact
     4321 gcgcgcgtca ctccggcagg tcgagccagg cgcggatggt gttctccagc accttggcga
     4381 ggaagaacag gagctcggtc gcctgctcgg gcccgaaggc ctcgggatcg cgcgagccga
     4441 agcacatcac gccgtcgggc gagcccgacg acacgcgaag ccgcatcagc acgtcggact
     4501 tcacgaaacg ggcgacctcg ccgaaaaagg cttcctcgcc ggcgatgctg gcgcgcagcc
     4561 tggcgtgctt gtcggggccg atggcggcat cgatggcgcc gggcgccagc acatagacgc
     4621 cgcgcaccgg gacgcgcttg ggggcgtcgg cgttggcctc gatggccagc gtgatgaaat
     4681 cgacgtccaa cagctcgggc agctcgtggg tgacgacgtg gatcatcttc tcgaaggtcg
     4741 tcgcctggat gatgctgatg accgccgcct ggatgcggtt ctggacgatc tggttctgct
     4801 tggagttggc gacgatctcg gtgcgctcgt tcttgaggcg atcgatctcc gaccgcaggc
     4861 gtttcaggat cgcctgctgc atgtcgatga cgccgggccc ccgcgccttg ggcgtcagcg
     4921 ccatcatctc ggccagctcg gcatggcgct cgaagaaatc gggatgggtc ttcaggtagg
     4981 cgacgacgtc gtcggcggtg atgaccttga tttgtcggcc cgaaccgtcg ggcgccggga
     5041 tcgtgccgtc gctgcccata tgcccgctcc gcgtcagagg atcgactggc cggtcttggc
     5101 ccggtcgtcg agaaaggctt ttaggccatt gtcggtcatg gcgagctttc tgccctcgtc
     5161 gagcatctct tgcgctcgac ggccgtcacc tcggcgctta cagggccggg cacgatggcg
     5221 cagatctcct tgaccgcctc gaccccgtcg agcaggcccg atgccgccag atccttgatt
     5281 tcggcgacgt cggcggtgtc gaccaagaac ttcatataaa ctaccccaat ggccagtggt
     5341 tcggacgcgc ctgctaccac aatttctagc gattccccct cgcagccaca agccgagggg
     5401 atcgcttcgc cgcgccctgg accggtggaa aaccccggcc agcccagccc cttaaggcga
     5461 actgttcgcg tcctgctgcc gctgcccctg gcggatgcct acgattacag cgttcccgac
     5521 gggctggacg ttgccgcggg ccacttcgtg gtcgtgccgc tcggcaagcg cgagaccgtg
     5581 ggcgtggtgt ggggcgaggg ctcgggcgag gtggcgcccg agaagctgcg cgacgtcgag
     5641 cacgtgctgc cggcgctgcc gatggccgat gcactgcgcc gcttcgtcga ctgggtcgcc
     5701 gcctacaccc tggcgccgcc cggcgcggtg ctgcgcatgg ccatgagcgt gccctcggcg
     5761 ctcgaagcgc ctaagaccga gatcgtctat cgcgccgccg ccaccaccgg tgactccgcg
     5821 ctgaagctga cggccgcgcg ccgtcgcgtg ctcgagcagt tgaaggaggg tccggccctg
     5881 ccggccgccg agctggccca tatcgcgggc gtcggcacct cggtgatcaa gaccatggcg
     5941 gcggtcggcc tcgtggaagg catcgagcgc acgatgcgcc gctctttcgc ccggcccgac
     6001 ggcaggcgcc agggaccggc gctctcgccc gagcaagcgg tggccgcgca aggtctggtc
     6061 gacaaggtgc tcgcgcatgc tttctccgcg accttgctcg atggcgtgcc cggcgccggc
     6121 aagacggagg tctatttcga ggcgatcgcg gcggcgctgg ccgcaggccg gcaggtgctg
     6181 gtgctgctgc ccgagatcgc gctcacggcg cagtggctga aacgcttcga ggatcgtttt
     6241 ggcgccctgc cggcgtcgtg gcattccggt ctcaccagcc tcgaacggcg cgagacctgg
     6301 cgcgccattg cagagggccg ggtgggcgtg gtggtgggcg cgcgctcggc gctgttcctg
     6361 ccattcgcca ctctcggcct gatcgtcgtc gacgaggagc acgacagctc cttcaagcag
     6421 gacgagggcg tcacctacaa tgcgcgcgac atggctgtgg tgcgggcgcg gctggtttcc
     6481 gcgccgatcg tgctcgcctc ggccacgccg tcgctcgaaa gcgtcgtcaa tgtcagcgcg
     6541 ggccgctacg gcgcgctgca tctgccggca cggcatggca
//
LOCUS       DASWGA010000629         3394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1973711, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000629 DASWGA010000000
VERSION     DASWGA010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3394
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1973711"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1674)
                     /locus_tag="VF991_14760"
     CDS             complement(<1..1674)
                     /locus_tag="VF991_14760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEX9557753.1"
                     /translation="MASGGDRTSADPGLIALATLLRFNGIGADAEQIRHQLGGSSVGT
                     SEMLRVAKDLGLKARLLATNWSRLAKTPLPAIAVLRDGGFLILGKVGDKDALIQHPLS
                     PRPTLMPRSELEAIWDGRLVLMTRRSGLLDLSRRFDITWFLGAVHKYRRLLGEVLIAS
                     FFLQLFALVSPLFFQVVVDKVLVHRSVSTLEVLVVGLVAISVFETILGILRTYVFSHT
                     TNRIDVELGARLFRHLVALPIAYFQSRRVGDSVARVRELENIRNFLTSSALTLVIDLF
                     FTFVFVAVMFFYSPLLTAIVLAAFPLYIAISAVATPLFRRRLDEKFKRGAENQAFLVE
                     SVTGIETLKAMAVEPQMQRRWEEQLAGYVAASFRVISLGNTSSQAVQLVNKLMTAATL
                     YYGALLVIDGSLSVGELVAFTMLSGRASAPVLRLAQIWQDFHQARLSIARLGDILNTV
                     PETAFKPTRAALPAIRGDVAFEHVTLRYRVDRPEVLHDINLSVPAGQVVGIVGASGSG
                     KSTFAKLIQRLYVPESGRVLVDGVDLAMVDTAWLRRQVGIVLQDNILFNS"
     gene            complement(1915..3081)
                     /locus_tag="VF991_14765"
     CDS             complement(1915..3081)
                     /locus_tag="VF991_14765"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9557754.1"
                     /translation="MENPYAPTHPEIRDAVRQLCLKFDGAYWRALDRERAYPTDFVKA
                     LTDAGWLATLIPEEYGGAGLGLSAAAAVLEEVQRAGCNGAACHAQMYIMGTVLRHGSA
                     EQKARYLPKIASGELRLQAFGVTEPTSGTDTLALRTTAVKKDNSTYIVNGQKVWTSRA
                     EHSDLMLLLARTTPREQTKKRTEGLSVFLVDMREALGKGLTIRPIRTMMNHNTTEVFF
                     DNMAVPAENLIGEEGQGFRYILGGMNAERVLIAAECIGDSRWFIERATDYAKERKLFG
                     RPIGQNQGVQFPIARAYAQTEAADLMVRKAAALYETGLPCGAEANMAKLLGSEAAWAA
                     ADMCVQTHGGFGFAEEYDIERKFRETRLYMVAPISTNMILNFIAEHVLGLPRSY"
     gene            complement(3207..>3394)
                     /locus_tag="VF991_14770"
     CDS             complement(3207..>3394)
                     /locus_tag="VF991_14770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557755.1"
                     /translation="TIGKFLTAERDLAVTQAIVDKSGAVDGVTARREATVDGFGPEIH
                     GALIDELARIAWGQSAD"
BASE COUNT          599 a         1112 c         1128 g          555 t
ORIGIN      
        1 cgaattgaac aggatgttgt cctgcaggac gattccgacc tggcggcgca gccaggcggt
       61 gtcgaccatg gcgagatcga cgccatccac cagcacacgg ccgctttccg gaacgtagag
      121 ccgctggatc agcttggcga acgtgctctt gcccgacccc gaggcgccga cgatgccgac
      181 gacctggccg gccggcacac tgagattgat gtcgtgcagc acttcgggtc tgtcgacgcg
      241 gtaacgcaag gtgacgtgct cgaacgcgac atcgccgcgg atcgccggca aggcggcccg
      301 cgtcggcttg aaggccgttt ccggcaccgt gttcaggatg tcgcccagcc gcgcgatcga
      361 cagccgcgcc tgatggaaat cctgccagat ctgggccagc cgcaggaccg gcgcgctcgc
      421 ccgccccgac agcatggtga aggccaccag ctcgccgacg ctcaagctgc cgtcgatgac
      481 cagcaaggcg ccgtaataga gcgtcgcggc ggtcatcagc ttgttgacga gttgcaccgc
      541 ctggctcgac gtgttgccga ggctgataac ccggaagctg gcggcgacgt agccggcgag
      601 ctgctcttcc cagcggcgct gcatctgcgg ctcgacggcc atcgctttca gcgtttcgat
      661 gccggtcacg ctctcgacga ggaacgcctg gttctccgcc ccgcgcttga acttctcgtc
      721 gaggcggcgg cggaacagcg gcgtcgccac ggccgaaatc gcgatataga gcgggaaggc
      781 cgccagcacg atcgcggtga gcagcggcga atagaagaac atcaccgcca cgaagacgaa
      841 ggtgaagaaa agatcgatga ccagcgtcag cgccgagctg gtgagaaagt tgcggatgtt
      901 ctcgagctcg cgcacgcgcg ccaccgaatc gccgacgcgc ctcgactgga agtaggcgat
      961 cggcagcgcc acgagatggc ggaacagccg ggcgcccaat tcgacgtcga tccggttggt
     1021 cgtgtgcgaa aagacgtagg tgcgcaggat gccgaggatc gtctcgaaga ccgagatggc
     1081 gaccaggccg acgaccagga cctcgagcgt gctcacgctg cgatggacca gcaccttgtc
     1141 gacgacgacc tggaagaaca gcggcgagac gagggcgaac agctgcagga agaacgaggc
     1201 gatcagcacc tcgccgagca gccggcgata cttgtggacg gcgcccagga accaggtgat
     1261 gtcgaagcgg cgcgacaggt cgagcaggcc ggaacggcgg gtcatcagga ccaggcgtcc
     1321 atcccagatc gcttcgagct cgctgcgcgg catcagggtg ggacggggcg acagcggatg
     1381 ctggatgagc gcgtccttgt ccccgacctt gccgagaatc aaaaaaccgc cgtcacgcag
     1441 caccgcgatc gccggcaagg gggtcttggc aagccgcgac cagttcgtcg ccagcagccg
     1501 cgccttgagg ccgaggtcct tggcgacgcg aagcatctcg gaggttccga ccgacgagcc
     1561 gccgagctgg tggcggatct gctcggcgtc ggcgccgatg ccgttgaagc gcagcaaagt
     1621 agccagggct atcagccctg ggtcggccga cgtccgatcg cccccgcttg ccatgggtta
     1681 aagcacgctc gcaacgatgg agaaccgcat cttcacccga tatgccatcg gtatcgtatc
     1741 gcgatggttg tgcaaacgcc actattaccg cgtaaattat ggctttcttg cgggagaacg
     1801 cgctgaaagt gtcggaatca ctaactctaa aggtcttgcc tcccatcagg tctgcgccgc
     1861 tgcgacaggg tccgtgcctt caccggccgg cggcggtgcc cgaacagggg tgtgtcaata
     1921 cgagcgcggc aaccccagca cgtgctcggc aatgaagttc aggatcatgt tggtcgagat
     1981 cggcgccacc atgtagagcc gcgtctcgcg gaacttgcgc tcgatgtcgt actcctcggc
     2041 gaagccgaag ccgccatggg tctgcacgca catgtcggcg gcggcccacg cggcctccga
     2101 gcccagcagc ttggccatgt tggcctccgc gccgcacggc aggcccgtct cgtagagcgc
     2161 cgccgccttg cgcaccatca ggtcggccgc ctcggtctgg gcataggcgc gggcaatcgg
     2221 gaactgcacg ccctggttct ggccgatcgg ccggccgaac agcttgcgct ccttggcgta
     2281 gtcggtggct cgctcgatga accagcgcga atcgccgatg cattcggcgg cgatcagcac
     2341 gcgctcggcg ttcatgccgc ccaggatgta gcggaagccc tgcccttcct cgccgatcag
     2401 gttctcggcc ggcaccgcca tgttgtcgaa gaacacttcg gtggtgttgt gattcatcat
     2461 ggtgcggatc ggccggatgg tgaggccctt gccgagcgcc tcgcgcatgt cgaccaggaa
     2521 caccgacagg ccctcggtgc gcttcttggt ctgctccctg ggcgtggtgc gggccagcag
     2581 cagcatcagg tcggaatgct cggcgcggct ggtccacacc ttctggccgt tgacgatgta
     2641 ggtgctgttg tccttcttta ccgccgtcgt gcgtagcgcc agcgtgtcgg tgccgctcgt
     2701 aggctcggtg acgccgaacg cctgcaggcg cagctcgccg ctggcgatct tcggcaggta
     2761 gcgcgccttc tgctcggcgc tgccgtgccg cagcacggtc cccataatgt acatctgggc
     2821 atggcacgcc gcgccattgc agccggcccg ctgcacctcc tccagcaccg ccgccgccgc
     2881 cgagaggccc agccccgccc cgccatactc ttccgggatc aaggtcgcga gccagcccgc
     2941 atcggtcagc gccttcacga agtccgtcgg ataggcgcgc tcgcggtcga gcgcccgcca
     3001 ataggcgccg tcgaatttca ggcagagttg gcggaccgca tcgcggattt caggatgcgt
     3061 cggagcatag ggattttcca tggcggcgac cctagagcct gctccccggg aagggaatca
     3121 gatcttccgg accgcgcgcc tctggcgcgc tcatgatcat gagcgagcca gaggctcgcg
     3181 gtccagaaga ccatgaggat gggtcactaa tccgcggact gcccccaggc aatgcgggcg
     3241 agctcgtcga tcagggcgcc gtggatctcg ggcccgaaac cgtcgacggt ggcttcgcgg
     3301 cgcgccgtga cgccgtcgac cgcgccagac ttgtcgacga tcgcctgcgt caccgcgagg
     3361 tcgcgttccg ccgtcaggaa tttgccgatc gtgg
//
LOCUS       DASWGA010000630         1764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_320430, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000630 DASWGA010000000
VERSION     DASWGA010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320430"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..726
                     /locus_tag="VF991_14775"
     CDS             4..726
                     /locus_tag="VF991_14775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pseudouridine synthase"
                     /protein_id="HEX9557756.1"
                     /translation="MSGPGGPRSKRKPPLSAEEIQARVLHRDGLILVIDKPAGLAVHA
                     GPSKAPNLEECFDALRFGLPRPPALAHRLDADTSGVLVLGRHPKALAKLGRLFSGRDT
                     EKTYWAVVQGAPPAEQGVFDQKLLKVNARSGWSVKVSDKGQTAITDYKVLGRGPGITW
                     LELKPRTGRTHQIRVHCAAAGCPVIADRLYGRAEPGTLLHLQSRGIVLPLSKTKPPIV
                     VTAPPPRHMIAALKACGFNPAP"
     gene            complement(710..1318)
                     /locus_tag="VF991_14780"
     CDS             complement(710..1318)
                     /locus_tag="VF991_14780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557757.1"
                     /translation="MCRAHGRAGTFLPHLWVNAQSVPRFYPNVVTLAHDEAAIAEQRD
                     TVGILTKSNLPGRWSVKDSFKTLDLSRQGFDVLLEASWIRSVMPTDGPSSDIVWQHET
                     EGKAVLPFDDPNFAMFTGRRGFAVVAGGMLYRADGVVGLSNVVADAADAVAVWRSLTL
                     LATRTFPRMPLVGYESGSELLAALDAGFEIGDPLRIWVKARD"
     gene            complement(1369..>1764)
                     /locus_tag="VF991_14785"
     CDS             complement(1369..>1764)
                     /locus_tag="VF991_14785"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9557758.1"
                     /translation="STATSALCALGLWLFFFIIWPQLGPAIAIGLAPSEIRNLDQYVG
                     VQEMGLLLMRLSPGTLFSEAVLALLSPETRSLGFVLPMQMRGAIPGAPLSFDQSLLLI
                     WPQVTGLIASMIVLFAATYVVFQRQEVRA"
BASE COUNT          325 a          600 c          578 g          261 t
ORIGIN      
        1 ctcatgagcg gacctggagg tccgcgctcc aaaagaaagc cgcctctgtc cgccgaagag
       61 atccaagcgc gggttctcca tcgcgacggg ctgatcctgg tgatcgacaa gccggcgggc
      121 ctcgccgtcc atgccggccc cagcaaggcg cccaacctcg aggaatgctt cgatgcgttg
      181 cgcttcggcc tgccgcgtcc gccggcgctg gcgcaccggc tcgatgccga cacgtcgggc
      241 gtgctggtgc tgggccgcca tcccaaggcg ctcgccaagc tcggccgcct cttttccggc
      301 cgcgatacgg agaagaccta ctgggctgtc gtgcagggcg cgccgcccgc cgagcagggc
      361 gtattcgacc agaagctcct caaggtgaac gcccggagcg gctggtcggt gaaagtgtcg
      421 gataaaggcc agaccgcgat caccgattac aaagtgctgg gacgtggtcc cggcatcacg
      481 tggctggaac tgaagccgcg aaccggacgc acccaccaga tccgcgtgca ttgcgcggcg
      541 gccggctgcc cggtgatcgc cgatcggctc tatggacggg ccgagcccgg cacgctgttg
      601 catctgcagt cgcgcggcat cgtgctgccg ctgtccaaga ccaagccgcc gatcgtcgtg
      661 acggccccgc caccacggca catgatcgcg gcattgaaag cctgcggctt caatcccgcg
      721 ccttgaccca aatccttagc gggtcgccga tctcgaagcc ggcgtcgagt gcggctagaa
      781 gctcgctgcc cgattcgtaa ccgaccagcg gcatgcgagg gaacgtcctg gtggccagca
      841 gggtcagcga ccgccacacg gcgacggcat ccgccgcatc ggccaccaca ttggacagcc
      901 ccacgacgcc atcggcgcgg tagagcatgc cgcccgccac gacagcgaaa ccgcgccggc
      961 cggtgaacat cgcgaagttc gggtcgtcga acggcagcac cgccttgccc tcagtctcgt
     1021 gttgccaaac aatgtccgac gacggcccgt cggtgggcat cacgctgcgg atccacgacg
     1081 cttccagcag cacgtcgaac ccctggcgag acagatcgag cgtcttaaaa ctgtccttca
     1141 ccgaccagcg gccgggcagg ttcgatttgg tcaggatgcc gaccgtgtcg cgctgctcgg
     1201 caatcgccgc ttcatcatgc gccaaggtca cgacgttggg atagaagcgc ggcactgatt
     1261 gggcattgac ccataggtgc ggcaggaatg tcccggcacg gccgtgcgcg cggcacaccg
     1321 cgtcgcacca gtgcgcgttg ttgcgggcgg ccgggagggt gaaatccttc aggccctgac
     1381 ttcctggcgc tggaagacca cgtaggtggc ggcgaacagc acgatcatgc tggcgatcag
     1441 gccggtgacc tgcggccaga tcaacagcag gctttggtcg aagctcagcg gcgcaccggg
     1501 gatggcgccg cgcatctgca tcggcagcac gaagcccagg gaacgcgttt ccgggctgag
     1561 caaggccagc acggcttcgg agaacagcgt gccgggcgac aggcgcatca gcagcagccc
     1621 catctcctgc accccgacat actggtcgag attcctgatc tccgacggcg cgaggccgat
     1681 ggcgatcgcc ggcccgagct gcggccagat gatgaagaag aacaaccaga gtcccagggc
     1741 acagagcgcc gacgtcgccg tcga
//
LOCUS       DASWGA010000631         1746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2095913, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000631 DASWGA010000000
VERSION     DASWGA010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2095913"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VF991_14790"
     CDS             complement(<1..238)
                     /locus_tag="VF991_14790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase domain-containing protein"
                     /protein_id="HEX9557759.1"
                     /translation="MSALWTSDEVARALSPSVITAPFAATGVTFDSRAVGKGDLFFAL
                     SGETTDGHRFVADALGRGAAAAVVSRDVAAAGTLV"
     gene            complement(235..>1746)
                     /locus_tag="VF991_14795"
     CDS             complement(235..>1746)
                     /locus_tag="VF991_14795"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEX9557760.1"
                     /translation="ELMRESAESPLPASPAKRGRWPEGLEGLGHDPAIAGLTLDSRKV
                     KPGYLFAALAGARQDGAAFVADAVGRGAVAILASADAVLPPLDPAIAVLRDANPRRRV
                     ALMAAAFAGLQPATIAAVTGTNGKSSTVHFLRHIWTTLALRAASVGTLGIVSPGLRRD
                     AGLTTPDPVQLHEDLATLAHEGVTHLAIEASSHGLDQHRLDGLRLSAAGFTNLTHEHL
                     DYHASMDDYFAAKARLFENLLPQSGTAVVNADSDRVEALAAICKRRGIRFWTYGMKGR
                     EFRLLKDDPTSTGQRLAIEVLGELHAVDLPLVGGFQASNALGALGLAVATGSDPDLAI
                     AALAGVSGAPGRLQLVARHRSGAPVYVDYAHKPEALETVLATLRPFARGKLVVVFGCG
                     GDRDRGKRPVMGEIATRLADLVLVTDDNPRSEEPAAIRSEIVRGIPAGRKNWVEVSDG
                     RHNAIEQGMAALEGEDDLLLIAGKGHETGQTIKGVTHPFDDAEVAREFAEPVA"
BASE COUNT          258 a          602 c          642 g          244 t
ORIGIN      
        1 ggaccagcgt gccggcggcg gcgacgtcgc gcgagaccac cgccgccgcg gcgccgcggc
       61 cgagcgcgtc agcgacgaag cgatggccgt cggtggtctc gccgctcaag gcgaagaaca
      121 ggtcgccctt gccgacggcg cggctgtcga acgtcacccc ggtcgctgcg aacggagcgg
      181 tgatcaccga cggcgagagc gcacgcgcca cttcgtcgga cgtccacagc gcgctcacgc
      241 caccggctcc gcgaattcgc gcgccacttc ggcgtcgtcg aaaggatggg tcacaccctt
      301 gatggtctgc ccggtctcgt ggcccttgcc ggcgatcagc agcaggtcat cctcgccctc
      361 gagcgcggcc atgccctgct cgatggcgtt gtgccggccg tcggatactt cgacccagtt
      421 cttccggccg gcgggaatgc cgcgcacgat ctcggagcgg atcgcggccg gctcctcgct
      481 gcgcggattg tcatcggtca ccagcaccag atcggccagc cgggtggcga tctcgcccat
      541 caccggccgc ttgccgcgat cgcgatcgcc gccgcagccg aacaccacca ccagcttgcc
      601 gcgggcgaag ggacggagcg tcgccagcac ggtttcgagc gcctcgggct tgtgggcgta
      661 gtcgacgtag accggcgcgc cagagcggtg ccgggcgacg agctgcaggc ggccgggcgc
      721 gccgctcacg ccggcaaggg cggcgatggc gaggtcaggg tcgctgccgg tcgccacggc
      781 gagaccgagg gcgcccaagg cattggacgc ctggaagccg ccgaccagcg gcaggtcgac
      841 ggcgtggagc tcgcctagta cctcgatcgc cagacgctgg cccgtcgagg tcggatcgtc
      901 cttcagcaag cggaactcgc gacccttcat gccgtaggtc cagaaacgaa tgccgcggcg
      961 cttgcagatc gcggccagcg cctcgacgcg gtcgctgtcg gcgttgacga cggcggtgcc
     1021 gctttgcggc agcaggttct cgaacagccg cgccttggcc gcgaagtagt cgtccatcga
     1081 ggcgtgatag tcgagatgct cgtgcgtcag gttggtgaag ccggcggctg acagacgaag
     1141 gccatcgaga cgatgctgat ccagcccatg gctcgacgcc tcgatcgcca ggtgcgtgac
     1201 gccctcgtgt gccagggtgg cgagatcctc gtggagctgc accggatcgg gcgtggtcag
     1261 gccagcgtcg cgcctgagcc ctggcgagac gatgccgagc gtgcccacgc tcgctgcccg
     1321 aagcgcgagc gtcgtccaga tatggcgcag gaagtgcacg gtcgaggact tgccgttggt
     1381 gccggtgacg gcggcaatgg tggcgggctg caggccggcg aaggccgccg ccatcaacgc
     1441 cacgcggcgg cggggattgg cgtcgcgcag cacggcgatg gccggatcga gcggcggcag
     1501 gacggcgtcg gcagaggcca ggatcgccac ggcgccgcgg cccaccgcat cggcaacgaa
     1561 cgccgcaccg tcctggcggg cgccggccag cgccgcgaac agatagcccg gctttacttt
     1621 gcgcgagtcg agggtcaggc cggcgatagc ggggtcgtgg cctagcccct ccagcccttc
     1681 gggccacctc ccccgctttg cgggggaggc tgggaggggg ctctcggcgc tttcgcgcat
     1741 gagctc
//
LOCUS       DASWGA010000632         5933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1335340, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000632 DASWGA010000000
VERSION     DASWGA010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5933
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335340"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..698)
                     /locus_tag="VF991_14800"
     CDS             complement(<1..698)
                     /locus_tag="VF991_14800"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEX9557761.1"
                     /translation="MPREIEREVGAVYPDAALQAYVDRVGQKLVAQPGFGGNYRFVVL
                     DMPSANAHALSNYIFVTRGLLAGLDDEAELAAALSHELGHLVQRHAAQRARARQGVLN
                     AAVEATTVTGSVTVGRSVARDGLLALRRYSREQELEADRIGLSFLVRAGYRGDAMASL
                     IEKLRRQSQFELHLMGEAPDSVDRRSATSTHPAPIERRIALEGIAEAAAPGATNRAAY
                     LAAINGMSVDDAPQ"
     gene            947..1954
                     /gene="pip"
                     /locus_tag="VF991_14805"
     CDS             947..1954
                     /gene="pip"
                     /locus_tag="VF991_14805"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEX9557762.1"
                     /translation="MPRSESPLRSDLFPEISPFASGMLAVDGRHTIYWEQSGNPDGVP
                     ALFLHGGPGAGSAPVHRRFFDPQFYRIVVFDQRGCGRSMPLGEIHDNTTSHLVADMEK
                     LRAHLGLTQWLMFGGSWGSTLALAYGLKYPERVIGFILRGIFLGARSEIDWFLHGMRA
                     IFPEAWRDFVEHLPDGERGDLLGNYYRRLIDRNPDSHRPAARAWSRYEAACSTLYPTA
                     RAPFESDHGGFALALSRIEAHYFAHGTFLPEGWPWHDLDRIRHLPGTIVQGRYDIVCP
                     PVTADALARGWPEARYVVVPDAGHSALEPGIRAALVNATESFRLSSSDDLFAPRFPWE
                     T"
     gene            1942..3015
                     /locus_tag="VF991_14810"
     CDS             1942..3015
                     /locus_tag="VF991_14810"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9557763.1"
                     /translation="MGNLKATPFELPPPQTGAAAWYGPDMSRRDDWQLPLGPAEIAEI
                     ETATTALAARRADIAAITSGDFPLPTLGPKLAARVQDEVLNGRGFLLMRGLPVERWSM
                     REAATAFFGLGTHLGKARSQNGKGHVLGHVQDLGLDVADPNVRIYQTHERQTYHTDSC
                     DIVGLLCLKTAKSGGLSALVSSTTIFNEMRRRRPDLLKLLFEPVATDRRGEVPEGHKP
                     YFEIPVFSWYRGFLTAIYQRQYIDSAQRFPDAPRLTSAHIEALDLFDSLANDPALHMF
                     MEFKPGDVQLVHNHTMLHDRTGFVDWPEPARRRHLLRLWLAASGARPLPESFAQRYGT
                     VTVGERGGIIMSGTRLQAPLEAV"
     gene            3111..3707
                     /locus_tag="VF991_14815"
     CDS             3111..3707
                     /locus_tag="VF991_14815"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEX9557764.1"
                     /translation="MASESTAGDAPDEMPVETSDENLDIPAQPQDLAGELQQLQAEKA
                     ELQDKLLRALAETQNVRRRAQQDVERERKFGIERLAKDVLSVADNLGRALSALPKDAE
                     AIDPAVRNVILGVQATERELQSVLERHGVTRIESLGKPFNAEFHQAMMEVEDPTVPAG
                     TVVQEMAPGYLIAGRLLRAAMVAVSKGGPAVRSPSNEN"
     gene            3917..5863
                     /gene="dnaK"
                     /locus_tag="VF991_14820"
     CDS             3917..5863
                     /gene="dnaK"
                     /locus_tag="VF991_14820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEX9557765.1"
                     /translation="MAKVIGIDLGTTNSCVAVMEGGDTKVIENSEGARTTPSMVAFTD
                     GGERLVGQAAKRQAVTNPLKTLYSVKRLIGRRFDDPMVTKEMSLVPFKIVKASNGDAW
                     VEVNGQQYSPSQISAFILGKMKETAESYLGEKVEQAVITVPAYFNDAQRQATKDAGRI
                     AGLDVLRIINEPTAAALAYGMDKRKSGMIVVYDLGGGTFDVSVLEIGDGVFEVKATNG
                     DTFLGGEDFDARVIAYLADEFKKEQGIDLRNDRLALQRLKEAAEKAKIELSNAKETEI
                     NLPFITADANGPKHLVIKLSRAKLEALVDELIQRTLEPCRAALKDAGLQAGQIDEVIL
                     VGGMTRMPKVIETVKQFFGKEPARNVNPDEVVAVGAAVQAAVLKGEVKDVLLLDVTPL
                     SLGIETLGGVFTRLIERNTTIPTKKSQVFSTAEDNQQAVTIRVFQGEREMAADNKLLG
                     QFDLVGIPPAPRGMPQIEVTFDIDANGIVNVSAKDKATGKEQQIRIQASGGLSEADIQ
                     KMVKDAELHAEEDKKKRELIDARNQGEALVHSTDRHLKEYGDKVSAEEKSAIEGALEG
                     LKSVLTGEDVEAIKTKTNELAQAAMKLGEAMYKAQQADAQTGAGPGAGGGEAGGGTHE
                     AKNDKVVDAEFEDVTDKNKKTGSG"
BASE COUNT         1081 a         1977 c         1973 g          902 t
ORIGIN      
        1 tcctgcggcg catcgtcgac cgacatgccg ttgatcgcag cgaggtaggc cgcacggttg
       61 gtcgcacccg gcgccgcggc ctccgcgata ccctccagcg cgatccgccg ctcgatcggc
      121 gcagggtggg tcgaggtggc gctgcgccgg tcgaccgagt cgggcgcttc gcccatgagg
      181 tgcagctcga actgcgattg ccggcgcagc ttctcgatca ggctcgccat cgcatcgccg
      241 cggtagccgg cgcgcaccag gaacgacagc ccgatccggt cggcttcgag ttcctgctcg
      301 cgcgagtagc gcctgagcgc gagcaacccg tcgcgcgcga ccgagcggcc gaccgtgacc
      361 gacccggtca ccgtcgtggc ctcgaccgcg gcattgagca cgccttggcg agcccgggcg
      421 cgctgggcgg catgtcgttg cacgaggtgg ccaagctcat ggctgagggc cgcggccagc
      481 tcggcctcgt cgtcgagccc ggccagcagc ccgcgcgtga cgaaaatgta gttggacagg
      541 gcgtgggcgt tggcgctcgg catatcgaga acgacgaaac gatagttgcc gccgaaaccc
      601 ggctgggcga ccagcttctg gccgacgcga tcgacatagg cttgaagggc ggcgtcggga
      661 tagaccgcac cgacttcgcg ctcgatctcg cgcggcaccg cgggcgcgct gccttgggct
      721 gccccctggc cggctgccgc agcggacgtc gccgtcggcg gcggactgcc ttgcgaggtg
      781 caggcggagg cccaaacgac gagcgcgata agcggcaaaa tacggcgaaa aaccactaac
      841 cctcctgcgc gctccggcga ccttagacgc ttggccgcgg cacctgcaat cgtggcgagg
      901 ctggaacaaa gcccgccgct atggcagtga gtcaccggtt aatcgcatgc cgcgttccga
      961 aagccccctt cgttccgact tattcccgga aatctcgccc ttcgccagcg gcatgctggc
     1021 tgtcgacggc cggcacacga tctattggga gcaaagcggc aaccccgacg gcgtgcccgc
     1081 gctgttcctg cacggcgggc cgggggccgg ttcggcaccg gtccatcggc ggttcttcga
     1141 tccgcagttc taccgcatcg tggtgttcga tcagcgcggc tgcggccgtt cgatgccgct
     1201 cggcgagata cacgacaaca ccaccagcca tctggtggcc gacatggaga agctgcgcgc
     1261 ccatcttggc ctcacgcagt ggctaatgtt cggcggttcg tggggcagca cgctggcgct
     1321 ggcgtacggg ctgaaatatc ccgagcgcgt gataggcttc atcctgcgcg gcatcttcct
     1381 cggcgcgcgg tccgagatcg actggttcct gcacggcatg cgagccatct tccccgaggc
     1441 ttggcgcgat ttcgtcgagc atctgccgga cggcgagcgc ggcgatcttt tgggcaacta
     1501 ctatcgccgc ctcatcgacc gcaatcccga cagccatcgt ccggcggcgc gcgcctggag
     1561 ccgctacgag gccgcctgct cgacgctcta cccgacggcc cgcgcaccct tcgaatcgga
     1621 ccatggtggc tttgcgctgg ccctgtcgcg catcgaggca cactacttcg cgcatggcac
     1681 cttcctgccc gaaggctggc cgtggcacga cctcgaccgc atccgccacc tgcccggcac
     1741 gatcgtgcag ggccgctacg acatcgtctg cccgcccgtg acggccgatg cgctggcgcg
     1801 gggctggccg gaggcgcgct atgtcgtcgt gcccgacgcg ggccacagcg cgctggagcc
     1861 gggcattcgt gccgccctgg tcaacgccac ggaaagtttc aggctttcga gcagcgacga
     1921 cctcttcgcc ccgcgctttc catgggaaac ctgaaggcca cgccgttcga gcttccgcca
     1981 ccccagaccg gcgccgccgc ctggtatgga ccggacatgt cgcggcgtga cgactggcag
     2041 ctgccgcttg ggcctgccga gatcgccgag atcgagacag cgaccacagc gttggccgcg
     2101 cgccgggccg atatcgcggc gatcacatca ggcgattttc cgctgccgac gcttggtccc
     2161 aaactcgcgg cgcgcgtgca ggacgaagtg ctgaacggcc gcggctttct cctgatgcgc
     2221 ggcctgccgg tcgagcgctg gtcgatgcgc gaggcggcga cggcgttctt cggcctgggc
     2281 acccatctcg gcaaagcccg ctcgcagaac ggcaagggcc atgtgctggg ccatgtccag
     2341 gatctcgggc tcgatgtggc cgatcccaac gtccgcatct accagaccca tgagcgacag
     2401 acttatcaca ccgattcctg cgacatcgtc ggcctgcttt gcctcaagac cgccaagagc
     2461 ggcgggctgt cggcgctggt gagctcgacc acgatcttca acgagatgcg ccgccgccgg
     2521 cccgatctgc tgaagctgtt gttcgagccg gtggccaccg accgccgcgg cgaagtgccg
     2581 gaaggccaca agccctattt cgaaattccg gtgttcagct ggtatcgggg gttcctgacg
     2641 gcgatctatc agcgccagta catcgactcc gcccagcgct tccccgacgc gccgcggctc
     2701 acatccgccc atatcgaagc gctcgacctg ttcgattcgc tggccaacga tcctgctctg
     2761 cacatgttca tggaattcaa gccgggcgac gtgcagctgg tgcacaatca caccatgctg
     2821 cacgaccgga cgggcttcgt ggactggccc gagcccgcgc ggcggcgcca tctgctgcgc
     2881 ctgtggctgg cagcatcggg cgcccggccg ctgcctgaaa gctttgccca gcgctatgga
     2941 acggtcacgg tgggcgagcg tggcggcatc atcatgtccg gcaccaggct gcaggccccc
     3001 ttggaggcgg tgtgacgcgg ccaccgggcc gcaagagggc agttgacccg gggcatcgtc
     3061 gtccctaagt gaagcccgcc gaaagaaacc actgacacta gggataacgt atggccagcg
     3121 agtcaaccgc gggcgacgcc ccggatgaga tgccggtcga gacgtccgac gagaacctcg
     3181 atattcccgc ccagccgcaa gacctggcgg gcgaactgca gcagttgcag gccgagaagg
     3241 ccgagttgca ggacaagctt ctgcgtgcct tggccgaaac ccagaacgtg cgccgccgtg
     3301 cccaacagga cgtggagcgc gaacgcaagt tcggcatcga gcggctcgcc aaggatgtcc
     3361 tgtcggttgc cgacaatctg gggcgcgccc tgtcggcgct gccgaaggac gccgaggcga
     3421 tcgacccggc ggtgcgcaac gtcatcctgg gcgtgcaggc gaccgagcgc gagctgcagt
     3481 cggtactgga acgccatggc gtcacccgca tcgaatcgtt gggcaagccg ttcaatgccg
     3541 aattccatca ggcgatgatg gaagtcgaag atcccacggt gccggcgggt acggtcgttc
     3601 aggaaatggc ccccggctac ctgatcgccg gccggctgct gcgcgcggcc atggtggcgg
     3661 tgtccaaagg cggtccggcg gtccgttctc ccagcaacga aaattaggac ctgccagaca
     3721 ctcggatgtc ccagtcgaca gcccggaatt gcggcggatt ccgcactttt agcccgtcca
     3781 atccattgca gccggcgcta taggacctat atagcccctg tcctgacccg gtttttccgg
     3841 caggtaacca tatatcaggg ggtcggcgcg gcgcctttgg ggccggaacg acctgcctag
     3901 ggaagagaga acagtcatgg cgaaagtcat tggtatcgac ctgggcacga ccaattcgtg
     3961 cgtcgcggtc atggaaggcg gcgacaccaa ggttatcgag aattccgaag gcgcccggac
     4021 cacgccgtcc atggtcgcct tcaccgacgg tggcgagcgc ctggtcggcc aagccgccaa
     4081 gcgccaggcg gtcaccaacc cgctgaagac cctctattcg gtcaagcgcc tgatcggccg
     4141 ccgcttcgac gacccgatgg tcaccaagga aatgtcgctg gtccccttca agatcgtgaa
     4201 ggcctccaat ggcgacgcct gggtcgaggt caacggccag cagtacagcc cgagccagat
     4261 ctcggccttc atcctcggca agatgaagga gaccgccgag tcctatctcg gcgagaaggt
     4321 cgagcaggcg gtcatcaccg tgccggccta tttcaacgat gcccagcgcc aggcgaccaa
     4381 ggacgccggc cgcatcgccg gcctcgacgt gctgcgcatc atcaacgagc cgacggccgc
     4441 cgcgctcgcc tatggcatgg acaagcgcaa gagcggcatg atcgtggtgt acgacctggg
     4501 cggcggcacg ttcgacgtgt cggtcctgga gatcggcgac ggcgtgttcg aggtgaaggc
     4561 caccaacggc gacaccttcc tgggtggcga ggatttcgac gcgcgcgtca tcgcctacct
     4621 ggccgacgag ttcaagaaag agcagggcat cgacctgcgc aacgaccggc tcgccctgca
     4681 gcgcctcaag gaggcggccg agaaggccaa gatcgagctc tccaacgcca aggagaccga
     4741 gatcaacctg ccgttcatca cggcggatgc aaacggcccc aagcatctcg tgatcaagct
     4801 gtcgcgcgcc aagctcgaag cgctggtcga cgaattgatc cagcgcacgc tcgagccgtg
     4861 ccgggccgcg ctcaaggatg ccggcttgca ggccggccag atcgacgagg ttatcctggt
     4921 cggcggcatg acccgcatgc cgaaggtcat cgagacggtt aagcagttct tcggcaagga
     4981 gccggcccgc aacgtcaacc ccgacgaggt cgtggcggtc ggtgcggcgg tccaggcggc
     5041 cgtgctgaag ggcgaggtca aggatgtcct gctgctcgac gtcacgccgc tgtcgctcgg
     5101 catcgagacc ctgggcggcg tgttcacgcg actgatcgag cgcaacacga cgatcccgac
     5161 caagaagagc caggtctttt cgaccgccga ggacaatcaa caggcggtga ccatccgcgt
     5221 cttccagggc gaacgcgaga tggcggccga caacaagctg ctcggccagt tcgacctggt
     5281 cggcataccg ccggcgccgc gcggcatgcc gcagatcgag gtcacattcg acatcgacgc
     5341 caacggcatc gtcaacgtct cggccaagga caaggccacc ggcaaggagc agcagatccg
     5401 catccaggct tcgggtgggc tgagcgaggc cgacatccag aagatggtga aggacgccga
     5461 gctgcatgcc gaagaggaca agaagaagcg cgagctgatc gacgcccgca accagggcga
     5521 ggcgctggtc cactcgaccg acaggcacct gaaggagtac ggcgacaagg tgagcgccga
     5581 ggagaagtcc gccatcgagg gtgccctcga ggggctgaag tcggtgctga ccggcgagga
     5641 tgtcgaggcg atcaagacca agaccaacga gctcgcccag gcggcgatga agctcggcga
     5701 ggcgatgtac aaggcccagc aggccgacgc gcaaaccggt gcagggccgg gcgcgggtgg
     5761 cggcgaggcc ggcggcggca cgcacgaggc gaagaacgac aaggtcgtcg acgccgagtt
     5821 cgaggacgtc accgacaaga acaagaagac gggctccggc tgagccggaa caagaacgaa
     5881 gacaaaccgg cctcccgctc gcgcgggagg ccgacctata agcggcaagt ggg
//
LOCUS       DASWGA010000633         2525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2214263, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000633 DASWGA010000000
VERSION     DASWGA010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2214263"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1091)
                     /locus_tag="VF991_14825"
     CDS             complement(<1..1091)
                     /locus_tag="VF991_14825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011976074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEX9557766.1"
                     /translation="MTDKAKTGRNTRRKFLKGAAVATATVAAPAVVKAQGPISMRWQS
                     TWPSKDIFHEYALDYAKKVNDMTGGDLKIEVLPAGAVVPAFGLLEAVSKGTLDGGHGV
                     LVYHYGKQTALALWGSGPGYGMDANMLLAWHRYGGGKELLEKLYASIGANVVSFPYGP
                     MPTQPLGWFKKPITKADDLKGLKYRTVGISIDVFQAMGAAVNALPGGEIVSAMDRGLL
                     DAAEFNNATSDRNLGFADVSKVCMLQSYHQNAEQFEITFNKTKYDALPDKMKAIIANA
                     VEAAGQDMSWKAIDRYSQDYIELQTKDKVKFYRTPDAILKRQLEVYDEVVAKKAADNP
                     LFKEIVQSQLAFAKRATQWEQDTVVSRKMA"
     gene            complement(1208..>2525)
                     /locus_tag="VF991_14830"
     CDS             complement(1208..>2525)
                     /locus_tag="VF991_14830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9557767.1"
                     /translation="TSERWLIDLSHADATPRLVAAREQGIRYSVYDRGDELFILTNEG
                     GAIDFRIATAPLATPERSHWRELIPHRPGIYIISVALHSGHLVRLERANALASIVIRD
                     LVAGAEHVIDFAEAAYSLDIVDGYEFDTTTLRFSYSSMTTPTEIYDYDMASRRRVLRK
                     RQEIPSGHDPAAYVTTRLMVPSHDGAQVPVSILHRRDFKPDGKAPLLLYGYGSYGMAM
                     PASFSANRLSLADRGFVYAIAHVRGGSDKGWSWYLDGKRARKTNTFDDFAAVARTLID
                     GKYTSAKRIVGHGGSAGGMLMGAVANRAGELFAGIVSEVPFVDVLNTMLDDTLPLTPP
                     EWPEWGNPITDETAFRFILSYSPYDNVAARDYPAILAMAGLTDPRVTYWEPTKWVARL
                     RATMTGGGPVLLRTNMGAGHGGAAGRFDRLDEVAIAYAFALHVTGT"
BASE COUNT          402 a          797 c          858 g          468 t
ORIGIN      
        1 gccatcttgc ggctcaccac cgtgtcctgt tcccactgtg tggcgcgctt ggcgaaggcg
       61 agctgcgact ggacgatctc cttgaacagg ggattgtccg ccgccttctt ggccaccacc
      121 tcgtcgtaga cctcgagctg gcgcttcagg atggcgtcag gtgtcctgta gaacttgacc
      181 ttgtccttgg tctgcagctc gatgtagtcc tgcgagtaac ggtcgatcgc cttccacgac
      241 atgtcctggc cggccgcctc gacggcgttg gcgatgatcg ccttcatctt gtcgggcagg
      301 gcgtcgtact tggtcttgtt gaaggtgatc tcgaactgct cggcgttctg gtggtagctc
      361 tgcagcatgc agaccttgga gacgtcggca aagcccaggt tgcggtccga cgtggcgtta
      421 ttgaattccg ccgcgtcgag caggccgcga tccatcgccg agacgatctc gccgccgggc
      481 aacgcgttca ccgccgcgcc catggcctgg aagacgtcga tcgagatgcc gacggtacgg
      541 tatttcaggc ctttcaggtc gtcggccttg gtgatcggct tcttgaacca gccgagcggt
      601 tgggtcggca tcgggccgta ggggaacgac acgacgttgg cgccgatcga ggcgtagagc
      661 ttttccaaaa gctccttgcc gccgccgtac ctgtgccagg ccagcagcat gttggcgtcc
      721 atgccatagc ccgggccgga gccccacagc gccagcgccg tctgcttgcc gtaatggtag
      781 accagcacgc cgtggccgcc gtcgagcgtg cccttggaca ccgcctcgag aagtccgaag
      841 gccggcacca cggcgcccgc cggcaacacc tcgatcttga ggtcgccgcc ggtcatgtcg
      901 ttgaccttct tggcgtaatc cagcgcgtat tcgtggaaga tgtccttcga cggccaggtg
      961 ctctgccagc gcatgctgat cgggccctgc gccttgacga cggccggcgc ggcgacagtg
     1021 gcggttgcga cggccgcgcc cttcaggaac ttgcgacgcg tattacgtcc agtcttggct
     1081 ttatcggtca ttgttgtctc ctccctatag cagtggggag gatgaaccgg cggttaaacg
     1141 cctgtccaga cctatcgccc gggactcacg ccagcgttac tcgggcagga ttgccggcca
     1201 gcggcattca ggtccccgtg acgtgcagcg caaaggcata ggcgatcgcc acctcgtcga
     1261 ggcgatcgaa gcggccggcc gccccgccat ggcccgcgcc catgttggtg cgcaggagga
     1321 ccgggccgcc gccggtcatc gtggcccgaa gccgcgcgac ccatttcgtc ggctcccagt
     1381 aggtgacgcg gggatcggtc aggccggcca tcgccaggat cgccgggtag tccctggcgg
     1441 cgacgttgtc gtagggcgag tacgaaagga tgaagcgaaa cgccgtttcg tcggtgatcg
     1501 ggttgcccca ttcgggccat tcggggggcg tcagcggcag cgtgtcgtcg agcatagtgt
     1561 tcagcacgtc gacgaagggg acctccgaca cgatgccggc gaaaagctcg cccgcccggt
     1621 tggcgacggc tcccatcagc atgccgccgg cgctgccgcc gtgaccgacg atgcgtttgg
     1681 ccgaggtgta tttgccgtcg atcagcgtgc gcgccaccgc agcgaaatcg tcgaacgtgt
     1741 tcgtcttcct ggcgcgcttg ccgtcgagat accagctcca gcctttgtcc gagccgccgc
     1801 gcacatgggc gatggcgtag acgaagcccc tgtctgccag cgacaggcgg ttggccgaga
     1861 acgacgccgg catcgccatg ccatacgagc cgtagccgta gagcaggagc ggcgctttgc
     1921 cgtcgggctt gaaatcccgg cggtgcagga tcgacaccgg cacctgggca ccgtcgtgcg
     1981 acgggaccat gaggcgcgtc gtgacatagg ccgccggatc gtggccggag ggaatttcct
     2041 ggcgcttgcg cagaacacgc cggcggctcg ccatgtcgta gtcgtagatc tccgtcggcg
     2101 tggtcatcga ggaataggag aagcgcaggg tcgtggtgtc gaactcgtag ccgtcgacga
     2161 tgtcgagcga gtaggcggct tcggcgaagt cgatgacgtg ctcggcgccg gcgacaaggt
     2221 cgcggatcac gatcgaggcc agcgcgttcg cccgttccag ccgcaccagg tggccggagt
     2281 gaagcgctac gctgatgatg tagatgcccg gacgatgggg gatcagctcg cgccaatggc
     2341 tgcgctccgg cgtcgccagc ggcgccgtgg cgatgcggaa gtcgatcgca ccgccttcgt
     2401 tcgtgaggat gaagagttcg tcgccgcgat cgtagacgct gtagcgaatg ccttgctccc
     2461 gcgccgccac caggcggggc gtggcgtcgg catgcgaaag gtcgatcagc cagcgctcgg
     2521 aggtt
//
LOCUS       DASWGA010000634         2676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2214368, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000634 DASWGA010000000
VERSION     DASWGA010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2214368"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VF991_14835"
     CDS             complement(<1..262)
                     /locus_tag="VF991_14835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008532849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557768.1"
                     /translation="MPSATLLGQALISGVLAGGMYGLLALGLSLSWGLLRLVNLSHFA
                     LAFLAAYLTYELGTTYHVAPWWSAAMVVPAMFLIGVTQHWLFD"
     gene            complement(270..1493)
                     /locus_tag="VF991_14840"
     CDS             complement(270..1493)
                     /locus_tag="VF991_14840"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9557769.1"
                     /translation="MVEGMAAWRRRRVLAGMVGASAALAAPALVRAAPSGTPVKVGGT
                     LSLTGFLAQTAVIHKIAAEMMVEEINSRNGFLGRPVAYVLLDDQSKPDVARSLYEKLI
                     TVDKVDLIQGPYATAPILAAMGVAQRYGKVMIQSSMGIPKLQTYERAFPATPFGPEPD
                     KTYPNVILDAMAAMPTPPKTMVILTSKFPSAQFMAVGMREQAEKRGVKVLLYLEYESG
                     NRDFGAIAARVKEANADFLWVGSLGLESNQLLESLRKLDYTPKNHFHLYPAPGPLALS
                     PDGDKALCSTFLEPDEPFMSRPGMKKLAADYKEKATKANLPYTTIDAQACGMISEWQI
                     LEAAVAGANSLEDEKIAAWLKKNRVTTVYGSLRFDGPFNHGDAAQLIKQVQNKEWKVV
                     WPKEFAAPGVKLIAS"
     gene            complement(1605..2312)
                     /locus_tag="VF991_14845"
     CDS             complement(1605..2312)
                     /locus_tag="VF991_14845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557770.1"
                     /translation="MAELLAVDHLAAGYGRAVVLHDVAFGLGEGEALAVLGRNGVGKT
                     TLLDSLIGVTRRFAGSIALGGREVGALAPERRAALGIGWVPQERNIFRSLSVQENITA
                     VARPGPWTLERVFGLFPRLRERRQQPGSSLSGGEQQMLAIGRALATNPRLLLLDEPTE
                     GLAPIIVQELLAALARLFREERLAAIIVEQHAQKILPITDRALILERGRIVHQSPSAA
                     LLADGTPLERFLGVTAR"
     gene            complement(2305..>2676)
                     /locus_tag="VF991_14850"
     CDS             complement(2305..>2676)
                     /locus_tag="VF991_14850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557771.1"
                     /translation="VEQVAERFGLLDVLDRRTDTLPYGKQRLLEIAAAFACAPQVLLL
                     DEPAAGVPEAERRDILDAIAALPADVSVLLIEHDMDLVFSFARRISVLVDGGLLVEGE
                     PAAIAADPRVRAVYLGESRNG"
BASE COUNT          439 a          902 c          892 g          443 t
ORIGIN      
        1 tgtcgaatag ccagtgctgc gtcacgccga tcagaaacat cgccggcacg accatcgccg
       61 ccgaccacca gggtgccacg tgataggtcg tgccgagctc gtaggtgaga taggcggcca
      121 ggaaggcgag cgcgaagtgg ctgagattga ccagccgcaa caggccccag ctcaggctga
      181 ggccgagcgc cagcagaccg tacatgcccc cggccaggac accggagatc aacgcctggc
      241 cgaggagcgt ggcacttggc atcacggtgt caggacgcga tcagcttcac tccgggagca
      301 gcgaactcct tcggccagac gaccttccac tccttgttct gcacctgctt gatgagctgg
      361 gcggcgtcgc cgtggttgaa cggaccgtcg aagcgcaggc tgccgtagac cgtggtgacg
      421 cggttcttct tgagccacgc cgcgatcttc tcgtcctcga ggctgttggc gccagccacc
      481 gccgcctcga gaatctgcca ttccgagatc atgccgcaag cctgggcgtc gatcgtcgtg
      541 tagggcaggt tggccttggt cgccttctcc ttgtagtccg cagcaagctt cttcatgccg
      601 ggccggctca tgaacggctc gtcgggctcg aggaaggtcg agcacagcgc cttgtcgccg
      661 tcaggcgaca gcgccagcgg gccaggcgcg gggtagagat ggaaatgatt cttgggtgtg
      721 tagtcgagct tgcgcagcga ttccaggagc tggttgctct ccaggcccag cgagcccacc
      781 cagaggaagt cggcattggc ttccttcacg cgcgcggcga tggcgccgaa atcgcggttg
      841 cccgattcgt actcgagata gagcagcacc ttgacgcccc tcttctcggc ctgctcgcgc
      901 atgcccaccg ccatgaactg cgccgacggg aacttcgagg tcaggatcac catggtcttg
      961 ggcggcgtcg gcatggcggc catcgcgtcc aggatcacgt tgggataggt cttgtccggc
     1021 tccgggccga acggcgttgc cggaaacgcc cgttcgtagg tctgcagctt cgggattccc
     1081 atgctgctct ggatcatcac cttgccgtag cgctgggcca cgcccatcgc cgccaggatc
     1141 ggcgcggtgg cgtaggggcc ctggatcagg tcgaccttgt cgacggttat cagcttttcg
     1201 tagaggctgc gcgccacgtc gggcttggac tggtcgtcga gcagcacata cgccaccggg
     1261 cggcccaaaa agccattacg gctgttgatc tcctcgacca tcatctcggc ggcgatcttg
     1321 tggatcaccg cggtctgggc gaggaagccc gtcagcgaca aggtgccgcc gaccttcacc
     1381 ggcgtgcctg acggcgccgc ccgcacgagc gccggcgctg ccagcgccgc gcttgctccc
     1441 accatgccag ccaagacgcg gcgacggcgc cacgcagcca tcccttccac catcgtttcc
     1501 tccagaccgg cgcattgttg ttgtcagcac cgttggcccg atggtgggtc aacgctagcg
     1561 gcctgtaaac gttttttcga aagtttcgaa actttcgaag atcgttaccg cgccgtgact
     1621 cccaggaagc gttcgagcgg cgtgccatcg gccagcaagg ccgcactcgg gctctgatgc
     1681 acgatgcggc cgcgctcgag gatcagcgcg cggtcggtga tgggcaggat cttctgcgcg
     1741 tgctgttcga cgatgatggc ggcgagtctc tcctcgcgga acaggcgcgc caacgcggcc
     1801 agaagttcct ggacgatgat cggcgccagg ccctcggtcg gctcgtcgag cagcagcaag
     1861 cgcggattgg tggcgagcgc gcggccgatc gccagcatct gctgctcgcc acccgacagc
     1921 gagctgccgg gctgctggcg gcgctccctg aggcgcggga agagtccgaa cacgcgctcc
     1981 agggtccacg gccccggccg cgccacggcg gtgatgttct cctgcacgct cagcgagcgg
     2041 aagatgttgc gttcctgcgg cacccagccg atgccgagcg cggcccgccg ttcgggcgcc
     2101 agcgcgccga cctcgcggcc gcccagcgcg atcgaaccgg caaagcggcg cgtcacgccg
     2161 atcaggctgt ctaaaagcgt cgtcttgccg acgccgttgc ggcccagcac ggccagcgcc
     2221 tcgccctcgc ccaggccgaa ggccacgtcg tgcagcacga cggcgcgacc gtagcccgcc
     2281 gccaggtggt cgacggcaag cagctcagcc attgcggctc tcgccgagat agacggcgcg
     2341 cacgcgcgga tcggcggcaa tcgccgcggg ctcgccttcg accagcagcc cgccgtcgac
     2401 cagcaccgag atgcggcgcg cgaagctgaa caccaggtcc atgtcgtgct cgatcagcaa
     2461 taccgacaca tcggccggca gggcggcgat ggcgtctaaa atgtcgcgcc gttcggcttc
     2521 gggcacgccg gccgccggtt cgtcgagcag caggacctgc ggggcgcagg cgaaggccgc
     2581 ggcgatttcc agcaggcgct gcttgccgta gggcaaggtg tcggtgcgcc ggtcgagcac
     2641 gtctaaaagg ccgaaccgct cggcgacttg ctcgac
//
LOCUS       DASWGA010000635         3602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2214752, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000635 DASWGA010000000
VERSION     DASWGA010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3602
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2214752"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VF991_14855"
     CDS             <1..252
                     /locus_tag="VF991_14855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557772.1"
                     /translation="LPAHWARYLPSYIDPVDRLVALDKDVQQAQADIRDILDRLAEKY
                     GATTQDVAVAMRSIDDTLGDLLYERRRLLEHDIEDGDPV"
     gene            complement(273..635)
                     /locus_tag="VF991_14860"
     CDS             complement(273..635)
                     /locus_tag="VF991_14860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557773.1"
                     /translation="MHWTVSHPQRLVVAVAKDEVTVADIEQYFAGVTADGAMAYRKIF
                     EITHTPNALSDENLKALGQRVVFYAQHGQIGPVAIVAASDESYAQAQIFAGAAQVRRP
                     LQIFRELHAARQWLDEQP"
     gene            771..1835
                     /locus_tag="VF991_14865"
     CDS             771..1835
                     /locus_tag="VF991_14865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557774.1"
                     /translation="MEIKDLRRRDVVSLLGSAAAVGAAGPAFAQAEPAKPGQIVVNHS
                     GGSMGTAMRKAFFAGYEKKYGIRVVETSPADFGKLRAMVDSGNVEWDITEIGGQDAIR
                     ATKMGLVEKIDDKVVDRSKYPEKARSPYVFASSVYTTIIGYRTDVFKGGSHPKTWAEW
                     WDAKKFPGARSMRNHPTDNLEFALLADGVPKDKLYPIDFDRAFKKLDEIKPHVTAWWS
                     TGQQPAQLLLDKEVVLATGWNGRFYDIIKKGAPVEIEWGEGALKQGSFVIPKGAKNAY
                     WAQKMLAEMSVPEQQAVYATELGYPGLNLESLNFVDAKVKPYLPTQYLDKQFWIDDSW
                     YAENGNKAQELWNAWMLKKA"
     gene            1840..2910
                     /locus_tag="VF991_14870"
     CDS             1840..2910
                     /locus_tag="VF991_14870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008529718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557775.1"
                     /translation="MAARIGAARIGAAKSGELRVEGLTRRFGDVVALDSVSLDIASGE
                     LLTILGPSGSGKTTLLKVVAGFERPDGGRVRVDGEDITTVPPARRDIGMVFQNYALFP
                     HLTVQANVAFPLEMRNVGKAEIERRVGETLALVELAGYEARLPKQLSGGQQQRVALAR
                     AIVFNPRLLLLDEPFGALDRKLRETMQLEVRRLQRRLGLTTIFITHDQEEALVLSDRI
                     AVMNRGAIQQVATTTEIYERPANDFVADFVGESNIFHGILTEPGVITLAGGRRIRVDG
                     AAAIGARLGVLMRPERFAMSGTNSFAGEVLEAVYLGASFKLRLACTDGLELIVRQPAR
                     GRLPAAGQRIEVGIEPDAIHVF"
     gene            2989..>3602
                     /locus_tag="VF991_14875"
     CDS             2989..>3602
                     /locus_tag="VF991_14875"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557776.1"
                     /translation="MNKSILPATPALVLLLVFFLFPVVRMLGFSVEAGSFEWYAKALG
                     EGLYIGVFWNTFEIALLVTGICLLLGYPLGFLIATTTPAWATAGFIFVLLPLWTSILV
                     RTYAWMVLLGRNGVFNRWLIDAGIITDPLPLLHNFTGVLIGMVHVLLPYMVLPIYGAV
                     RRLDPAVVAAAEGLGASNWRIFWRIHLPLTLNGIFAGCVLVFVLS"
BASE COUNT          604 a         1165 c         1197 g          636 t
ORIGIN      
        1 ctgccggcgc attgggcgcg ctatttgccg agctatatcg atccggtcga ccggttggtg
       61 gcgctggaca aggatgtgca gcaggcccaa gccgacatcc gcgacatcct cgaccggctt
      121 gccgaaaaat acggcgccac gacacaggac gtggccgtgg ccatgcgctc gatcgacgac
      181 acgctgggcg atctgctgta cgagcgccgc cggctgctcg agcacgacat cgaagatggc
      241 gacccggtct aagcgcatcg cgcttgccgg ttctaaggct gctcatccag ccattggcgt
      301 gcggcgtgca gttcgcggaa aatctgcagc ggccggcgga cctgtgcggc gccggcgaag
      361 atctgggcct gcgcataact ttcatcggac gccgcgacga tcgccaccgg gccgatctgg
      421 ccgtgctggg catagaagac gacgcgctgg ccgagcgctt tcaggttctc gtcgctgagc
      481 gcgttgggcg tatgggtgat ctcgaagatc ttgcgatagg ccatggcacc gtcggcggtg
      541 acgccggcga aatactgctc gatgtcggcc accgtcacct cgtccttggc gacggcgacg
      601 acgagccgct ggggatgaga aaccgtccag tgcacaggca tgggtccaaa ctagcattgt
      661 gaggctggcg cgaccacgcc ggatcgccgc tgtcgggacg tcgagcagtg ttgcccgcgc
      721 cgtgtgcccc tcctagagtt gcgccgggga tatcgaagag gggacctgcc atggaaatca
      781 aggacctgcg ccgtcgcgac gtcgtgtcac ttttggggag tgccgctgcc gtcggcgcgg
      841 cgggaccggc cttcgctcag gccgagccgg ccaagcccgg ccagatcgtg gtcaaccatt
      901 ccggcgggtc gatgggcacg gccatgcgca aggccttctt cgccggctac gagaagaaat
      961 acggaatccg cgtggtcgag accagcccgg ccgatttcgg caagctgcgc gccatggtcg
     1021 actcgggcaa cgtcgaatgg gacatcaccg agatcggcgg tcaggacgcc atccgcgcca
     1081 ccaagatggg gctggtcgag aagatcgacg acaaggtcgt cgaccgctcg aaatatcccg
     1141 agaaggcgcg cagtccttac gtctttgcct cgtcggtcta caccaccatc atcggctatc
     1201 gcaccgatgt gttcaaaggc ggcagccatc ccaagacctg ggcggaatgg tgggacgcca
     1261 agaagtttcc cggcgcgcgt tccatgcgca accacccgac cgacaatctc gagttcgcgc
     1321 tgctggccga cggcgtgccg aaggacaagc tctatcccat cgacttcgac cgcgccttca
     1381 agaagctcga cgagatcaag ccgcacgtca cagcctggtg gtcgaccggc cagcagccgg
     1441 cccagcttct gctcgacaag gaggtcgtgc tggcgacggg ctggaacggc cgcttctacg
     1501 acatcatcaa gaagggcgcg ccggtcgaaa tcgaatgggg cgaaggcgcg ctgaagcagg
     1561 gcagcttcgt catcccgaag ggcgccaaga atgcctactg ggcccagaag atgctggccg
     1621 agatgtcggt gcccgagcag caggcggtct atgccaccga gctcggctac cccggcctca
     1681 acctcgaatc gctgaatttc gtcgacgcca aggtgaagcc ctatctgccg acgcagtacc
     1741 tcgacaagca gttctggatc gacgattcgt ggtacgccga gaacggcaac aaggcgcaag
     1801 agctgtggaa cgcctggatg ctgaagaagg cctgacgcat tggcggctag aattggggcg
     1861 gccagaatcg gggcggcaaa atcgggggag ctccgcgtcg agggactgac gcggcgcttc
     1921 ggcgacgtgg tggcgctcga cagcgtgtcg ctcgacatcg cctcaggcga gcttttgacc
     1981 atcctggggc cgagcggctc gggcaagacc acgctgttga aggtcgtcgc gggcttcgag
     2041 aggccggatg gcggccgcgt gcgggtcgat ggcgaggaca tcaccacggt gccgccggcc
     2101 aggcgcgata tcggcatggt gttccagaac tacgccctct ttccgcatct cacggtgcag
     2161 gccaatgtgg cgtttccgct ggagatgcgg aacgtcggca aggccgagat cgagcggcgc
     2221 gtgggcgaga ccctggccct ggtcgagctg gcgggctacg aggcgcggct gcccaaacag
     2281 ctgtcgggcg gccagcagca acgcgtggcg ctggcccgcg ccatcgtctt caatccgcgg
     2341 ctgctgctgc tcgacgaacc gttcggcgcg ctcgaccgca agctgcgcga gaccatgcag
     2401 ctcgaggtgc gccgcctgca gcgccggctc gggctcacca cgatcttcat cacgcatgac
     2461 caggaggagg cgctggtgct ctccgaccgc atcgccgtga tgaaccgcgg cgccatccag
     2521 caggtcgcca ccacgaccga gatctacgaa cggccggcca acgatttcgt cgccgacttc
     2581 gtgggcgaga gcaacatctt ccatggcatc ctgaccgagc ccggcgtgat cacgctggcc
     2641 ggcggacgac ggattcgggt cgacggcgca gcggcgatcg gcgcgcggct gggcgtgctg
     2701 atgcggcccg aacgctttgc catgagcggc acgaactcct tcgctggcga agtgctggag
     2761 gcggtctatc tcggcgcctc gttcaagctt cggctggcct gcaccgacgg gctggaattg
     2821 atcgtccgcc agcccgcgcg cggccgcctc ccggccgccg gccagcgcat cgaggtcggc
     2881 atcgaaccgg acgcgattca tgttttttga gtctttgctg ggggcgcgcc actccagtgg
     2941 cgcttctttc atcgctatga gcgccactgg agtggcgcgc tcccagccat gaacaaatcg
     3001 atccttccgg cgacgcccgc cctcgttctt ctgctcgtct tcttcctgtt cccggtcgtg
     3061 cgcatgctgg gcttcagcgt cgaggccggc agcttcgaat ggtacgccaa ggcgctgggc
     3121 gagggcctct atatcggcgt gttctggaac accttcgaga tcgccctgct ggttaccggc
     3181 atctgcctgc tgctgggcta tccgctgggc ttcctgatcg cgaccacgac gccggcttgg
     3241 gcgacggccg gcttcatctt cgtgctgctg ccgctgtgga cctccatcct ggtgcgcacc
     3301 tacgcctgga tggtgctttt gggccgcaac ggcgtcttca atcgctggct gatcgatgcc
     3361 ggcatcatca ccgacccgct gccgctgctg cacaatttca ccggcgtgct gatcggcatg
     3421 gtgcacgtgc tgctgcccta catggtgctg ccgatctacg gcgcggtgcg acggctcgat
     3481 cccgccgtcg tcgccgccgc cgaggggttg ggcgcctcca actggcgaat cttctggcgc
     3541 atccatctgc cgctgacctt gaacggcatc tttgccggct gcgtgctggt gttcgtgctg
     3601 tc
//
LOCUS       DASWGA010000636         2508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1974943, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000636 DASWGA010000000
VERSION     DASWGA010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1974943"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VF991_14880"
     CDS             complement(<1..251)
                     /locus_tag="VF991_14880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-phosphate decarboxylase"
                     /protein_id="HEX9557777.1"
                     /translation="MADVPITGPRAPEPVAHGGDLGAIRRRFPKAPQPWIDLSTGINP
                     VAYPVAQLPPEIWSRLPTREALQALLAAAARRYGVPDPAT"
     gene            250..1218
                     /gene="cbiB"
                     /locus_tag="VF991_14885"
     CDS             250..1218
                     /gene="cbiB"
                     /locus_tag="VF991_14885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016880 - acid-ammonia (or amide) ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-phosphate synthase CbiB"
                     /protein_id="HEX9557778.1"
                     /translation="MFADLALIAVATEAIIGYPDAVYRLVGHPVIWIGRLIAWCDRAW
                     NSPALPFEARRWRGVVALLLVLAIAVAAGVAVTSILAHFFPAILALVLAGVLASSLLA
                     QRSLDAHVADVALALERDGIEAGRRAVSQIVGRETKSLDEAAVCRAAIESLAENFSDG
                     VVAPLFWMVLAGLPGALAYKAINTADSMIGHKSQRHLAFGGASARCDDLVNLPASRLS
                     ALWLVLAAALLGLSPGRALAAVRRDAGHHRSPNAGWPEAAMAGALGIRLSGPRIYDGL
                     PVEERWVGEGRSELSARDIRLALKLYRVACGLQIAALAVLVVSLRL"
     gene            complement(1202..1969)
                     /locus_tag="VF991_14890"
     CDS             complement(1202..1969)
                     /locus_tag="VF991_14890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557779.1"
                     /translation="MKQAGYLAAGLVSVVLAHHAAVIPHEFAHSFMAYALGYKSDPLV
                     IHWGGRSIANLLLLININQQVDYAAMFARGHGLAAALVGFAGPGLANGALYLLSLWLL
                     QWPAVRGNALLFMFVFWFNFMNVGNFFDYVPIRTFASHGDIADIVQGLDISPWVALVV
                     LGIPTAIAMWFFFARTLPMALGRIAPDSSFRRGLIVTLSVLIMFGYFGLVGIIGYGQI
                     SRVLSLLSLCLIPVMLILCWPTRRWMRARIEASKAAG"
     gene            complement(1966..>2508)
                     /locus_tag="VF991_14895"
     CDS             complement(1966..>2508)
                     /locus_tag="VF991_14895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase CobQ"
                     /protein_id="HEX9557780.1"
                     /translation="LRDAGWDIDLLAHLRRGGHVLGICGGYQMLGKKISDPNGIEGSP
                     ATVDGLGLLDIETVLEGDKVLVEISGETVPENVPFKGYEMHIGRTTGSPRPLLRLCNG
                     KHDGAVSADGRIAGCYIHGLFADDRQRHHWLQRIGAQASTFSYEPAVDATLDQLADHI
                     EKHVDCDLLLELAREPKVRS"
BASE COUNT          426 a          795 c          867 g          420 t
ORIGIN      
        1 gtcgcgggat cggggacgcc gtatcggcgc gccgcggccg cgagcaacgc ctgcagggcc
       61 tcgcgcgtcg gcaggcgcga ccagatctcc ggcggcagtt gggccaccgg ataggcaacg
      121 ggattgatgc cggtcgaaag atcgatccac ggttggggcg ccttggggaa tcggcgccgg
      181 atcgcgccga gatcgccgcc atgcgcgacc ggttccggtg cccgaggccc cgtgataggc
      241 acatctgcca tgttcgccga cctcgccctc attgccgtcg cgaccgaagc gatcatcggc
      301 tatccggacg ccgtctatcg tctcgtcggt catcccgtga tctggatcgg ccggctcata
      361 gcatggtgcg atagggcatg gaattcgccg gcgctgccgt tcgaggcgcg gcggtggcgc
      421 ggtgtcgtgg cactcctgtt ggtgctggcc atcgccgttg ccgcgggtgt cgcggtcacc
      481 tccatcctcg ctcatttctt tccggccatc ctcgcgctgg tgctcgccgg cgtgctggcc
      541 agcagcctgc tggcgcagcg cagcctcgat gcgcatgtcg ccgacgtggc cttggcgctg
      601 gagcgggacg gcatcgaggc cggccggcga gccgtgtcgc agatcgtcgg acgcgagacc
      661 aagagcctcg acgaagctgc ggtctgcagg gcggctatcg agagtctcgc cgagaatttt
      721 tccgacggcg tggtggcgcc attgttctgg atggttttag ctggcctacc cggtgcgctc
      781 gcctacaagg cgatcaacac cgccgacagc atgatcggcc acaagtccca gcgccatctc
      841 gctttcggcg gggcgtcggc gcgctgcgac gatctcgtga acctgccggc ctcgcggctc
      901 tcggcgttgt ggctggtgct ggcggcggcg ctgctcggcc tctcgcccgg ccgggcgctg
      961 gcggcggtcc ggcgcgacgc gggccaccac cgctcgccca atgctggctg gccggaagcg
     1021 gccatggcgg gcgcgctcgg catccgcctg tcgggaccgc gcatctatga cggattgccg
     1081 gtcgaggagc gctgggtcgg cgagggccgc agcgaacttt cagcgcgcga catcagattg
     1141 gcactgaaac tctatcgtgt ggcgtgcggt ctgcagatcg cggcgcttgc cgtgctcgtc
     1201 gtcagcctgc ggctttagag gcttctatcc tggcccgcat ccagcggcgc gtcggccagc
     1261 agaggatcag catgaccggg atgaggcata gcgacagcag cgagaggacg cgggagatct
     1321 ggccgtagcc tatgatgccc acgaggccga aatagccgaa catgatgagg acgctcaggg
     1381 tgacgatgag cccgcgtcga aaagacgaat ccggtgcaat ccggccgagc gccatgggca
     1441 gggtgcgcgc gaagaagaac cacatggcaa tggcggtcgg gatgccgagg acgacaagag
     1501 cgacccaggg cgaaatgtcg agcccttgca caatatcggc gatatcgccg tgggacgcga
     1561 aggtgcggat cggcacatag tcgaagaaat tgccgacgtt catgaagttg aaccagaaca
     1621 cgaacatgaa gagcaaggca ttgccccgca cggccggcca ttgcaggagc cagagcgaca
     1681 gcagatagag cgcgccattg gccaatccgg ggccggcgaa gccgaccagc gccgcggcaa
     1741 gcccgtggcc gcgcgcgaac atggcggcgt agtcgacctg ctggttgatg ttgatcagca
     1801 gcaggaggtt ggcaatgcta cggccacccc agtggatgac cagcggatcg ctcttgtagc
     1861 cgagcgcgta cgccatgaag gaatgcgcga actcgtgggg gatcaccgcc gcatgatgcg
     1921 ccagcacgac cgaaaccagg ccggcggcaa ggtatccggc ctgcttcatg agcggacttt
     1981 cggctcgcgc gccagctcga gcagcaggtc gcaatcgaca tgcttctcga tgtggtcggc
     2041 gagctgatcg agcgtcgcgt cgaccgcggg ctcgtaggaa aacgtcgacg cttgcgcgcc
     2101 gatgcgctgc agccagtggt ggcgctggcg gtcgtcggcg aaaagcccat ggatgtagca
     2161 gccggcgatc cggccgtcgg cgctcaccgc gccgtcatgc ttgccgttgc agagtcttag
     2221 cagcgggcgc ggcgagccag tcgtccgccc gatatgcatc tcgtagccct tgaagggcac
     2281 attttccgga acggtctcgc ctgagatttc gaccaggacc ttgtcgcctt ccaggactgt
     2341 ctcgatgtcg agcaggccga ggccatcgac cgtggccggc gagccctcga tgccgttcgg
     2401 atcggagatt ttctttccca gcatctgata gccgccgcaa atgccaagca cgtgtccgcc
     2461 gcgtcgcaga tgtgccagca aatcgatgtc ccatccggca tcacgcaa
//
LOCUS       DASWGA010000637         1510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_592058, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000637 DASWGA010000000
VERSION     DASWGA010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_592058"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="VF991_14900"
     CDS             <1..756
                     /locus_tag="VF991_14900"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9557781.1"
                     /translation="IHYEEMGTGFPLLIIPGGGLNSTIAGLDSTSHPFNAMKELKDGF
                     RCIGADLRNANAGQSSGPLEIERPWDAFTDDHIGLMDHLGIDRFMVLGYCIGGPFIWN
                     LIKRAPQRVIAAVLTQPSGYRPEMPDQFYQNNMGNWGPAFAARRPDITMEQVSAFLSK
                     MYRANADFVFTVTRDFVRACQTPILVLPDDIPPHPYAVAMESAMLAPNAQVSLYPWKD
                     TPEKIPLAVRHIRTFLKANRPATTAMEQRAAAS"
     gene            789..>1510
                     /locus_tag="VF991_14905"
     CDS             789..>1510
                     /locus_tag="VF991_14905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9557782.1"
                     /translation="MSVRAGREFLAIPGPTTVPDEVLRAMHRPAVDIYSGPLLALTDG
                     LLRDVAGVFKTKGRAYIYIANGHGAWEATLTNVLSKGDKILVLESGRFAIGWGENARR
                     MGVEVEVLKGDMRRAVRPAEVEARLKADRTTNGGRTIKAVLVAQIDTASGVVNDIAAI
                     GQAMRAAGHDALLMVDAVASLGCMPFEMDAWGVDVAMSGSQKGMMTPPGLGFVAANDR
                     AREIHKKAGLRTPYWDWTDREG"
BASE COUNT          270 a          489 c          520 g          231 t
ORIGIN      
        1 atccattacg aagagatggg cacgggcttt ccgctgctga ttatcccggg cggcgggctc
       61 aactcgacga ttgccggcct tgatagtacc agccatccct tcaacgcgat gaaggaatta
      121 aaggacggct tccgctgcat cggcgccgac ctgcgcaacg ccaacgccgg ccagtcgtcg
      181 ggcccgctcg agatcgagcg gccgtgggac gccttcaccg acgaccatat cggcctgatg
      241 gatcacctgg gcatcgacag gttcatggtg ctgggctact gcatcggcgg gccgttcatc
      301 tggaacctga tcaagcgcgc gccgcagcgc gtgatcgccg ccgtgctgac gcagcccagt
      361 ggctaccgcc cggaaatgcc cgaccagttc taccagaaca acatgggcaa ctgggggccg
      421 gccttcgccg cgcgccggcc cgatatcacg atggagcagg tgagcgcgtt cctcagcaag
      481 atgtaccgcg ccaacgccga cttcgtgttc accgtgacgc gcgatttcgt gcgcgcctgc
      541 cagacgccga tcctcgtcct gcccgacgac atcccgcccc atccctacgc ggtggccatg
      601 gagtcggcga tgctcgcgcc caacgcgcaa gtgagcctgt atccgtggaa ggacacgccg
      661 gaaaagatcc cgctcgcggt gcggcacatc agaacgttcc tgaaagccaa tcggccggcg
      721 acaacggcga tggagcagag agcggcggcg tcctgagcgc gcgagtagca gagtatgagg
      781 ggcgaaaaat gagcgtgcgt gcggggcgtg aattcctggc cattcccggg ccgacgacgg
      841 tgcccgacga ggtgctgcgg gcgatgcatc gtccggcggt cgatatctat tcaggcccct
      901 tgctggcgct gaccgacggc ttgctgcgcg acgtcgccgg tgtgttcaag accaagggcc
      961 gcgcctacat ctatatcgcc aatgggcacg gcgcctggga ggcgaccctc accaacgtgc
     1021 tcagcaaggg cgacaagatc ctggtgctcg agagcggccg tttcgccatc ggctggggcg
     1081 aaaatgcccg tcgcatgggc gtcgaggtcg aggtcctgaa gggcgacatg cgccgtgccg
     1141 tgcggccggc cgaagtcgag gcgcgcctca aggccgaccg cacgaccaat gggggccgca
     1201 ccatcaaggc cgtgctggtg gcgcagatcg acaccgcctc gggcgtggtc aacgacatcg
     1261 cggcgatcgg ccaggcgatg cgcgcggccg ggcatgacgc gctgctgatg gtcgacgcgg
     1321 tggcttcgct gggctgcatg cccttcgaga tggacgcctg gggcgtggac gtggcgatgt
     1381 cgggctcgca gaagggcatg atgacaccgc cggggctggg cttcgtcgcg gcaaacgacc
     1441 gcgcgcgcga gatccacaag aaggccgggc tgcgcacgcc ctactgggac tggaccgacc
     1501 gcgagggcga
//
LOCUS       DASWGA010000638         3856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1841750, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000638 DASWGA010000000
VERSION     DASWGA010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3856
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1841750"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..741
                     /locus_tag="VF991_14910"
     CDS             <1..741
                     /locus_tag="VF991_14910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003531041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEX9557783.1"
                     /translation="HLDEIIEQSDGIMVARGDLGVEMPPEAVPPLQKRILAACRVAGR
                     PAIVATQMLDSMVHSPTPTRAEASDVATAVYDGTDAVMLSAESASGDYPVEAVTMMDR
                     ILKSVEADPLYRRLMDASRHEPEATTADAISAAARQCAHTLSAAAIVTYTNTGSTTLR
                     AARERPDVRILCLTPNLHTARRMTLTWGVHPVHGEDAHNFADMVQRAVRVARKEEIAK
                     EGQRLVITAGVPFGTPGATNILRIAYVT"
     gene            793..1074
                     /locus_tag="VF991_14915"
     CDS             793..1074
                     /locus_tag="VF991_14915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557784.1"
                     /translation="MSEAIVNSTPNKTQTIARRRHSRLSLNWIDFLVIAAIILTFTAI
                     VSTTLGRAKASTYNSALSSPRFSSEVSQIPEDRGLIKARIRLAVGGPWT"
     gene            complement(1084..2373)
                     /locus_tag="VF991_14920"
     CDS             complement(1084..2373)
                     /locus_tag="VF991_14920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9557785.1"
                     /translation="MTINLFPEIKLSLDALRAVQLERLKSVLSRAYQHQAPYRAKCQA
                     AGVHPDDLHRLEDLERFPFTSKADLRDAYPFGMLAIAREKCVRLHASSGTTGRPTVVG
                     YSAHDIDTWAGVMARSLHAGGARPGDVVHNAYGYGLFTGGLGVHYGAERLGCTVVPMS
                     GGFGERQVQLIREFGARVVLMTPSYMLAIADEFERQGVDPRDTALRIGIFGAEPWTEG
                     MRAEIERRLGIDAVDLYGLSEVMGPGVACEFVDSKDGPTIWEDHFYPEVVDPASGTPV
                     PDGQPGELVFTTLTKEAMPVVRYRTRDLTHLMAGSRTAMRRMAKITGRSDDMLIVRGV
                     NLFPSQVEEQILRDPALSGHYLIELTRDGALDDLLVRVEARMVLEGEAASRSAEELGR
                     RLKGMCGLSAAVEIAAPGIIERSMGKARRVIDKRPKA"
     gene            complement(2370..3722)
                     /locus_tag="VF991_14925"
                     /pseudo
     CDS             complement(2370..3722)
                     /locus_tag="VF991_14925"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
BASE COUNT          722 a         1336 c         1275 g          523 t
ORIGIN      
        1 catctcgacg agatcatcga gcagagcgac ggcatcatgg tggcgcgcgg cgatctcggg
       61 gtggagatgc cgcccgaagc cgtgccgccg ttgcagaagc gcatcctcgc cgcctgccgc
      121 gttgcgggac ggccggccat cgtggcgacc cagatgctcg actcgatggt ccattcaccg
      181 acgccgacac gggccgaggc ctccgatgtc gcgaccgcgg tctatgacgg caccgacgcc
      241 gtcatgctct cggccgagtc cgcttccggc gactatccgg tcgaagccgt caccatgatg
      301 gatcgcatcc tgaagagcgt cgaagccgac ccgctctatc gtcgcctgat ggatgcgagc
      361 cgccacgagc ccgaggccac caccgccgat gcgatcagcg ccgcggcgcg ccagtgcgcg
      421 cacacgcttt cggcggcagc catcgtcacc tacaccaaca ccggctcgac gacgctgcgc
      481 gccgcccgcg agcggccgga cgtgcgcatc ctttgcctta cgcccaactt acacacggcc
      541 cggcgcatga cgctcacttg gggcgtccat ccggtgcacg gcgaggacgc gcacaatttc
      601 gccgacatgg tgcagcgcgc ggtgcgcgtc gcccgcaagg aagagattgc caaggaaggc
      661 cagcggctgg tgatcaccgc cggcgtgccg ttcggcaccc ccggcgccac caacatcctt
      721 cggatcgcct acgtgacctg aaaaagatcg gggatggacg caacggttcc cgcgtaactt
      781 tttcacaagc acatgagcga ggcgatcgtg aacagcacgc ccaacaaaac tcagaccatc
      841 gctcggcggc gccacagccg gctgtcgctg aactggatcg acttcctggt catcgccgcc
      901 ataattttga cgtttacggc gatcgtcagc acaacccttg gccgtgccaa ggcgtcgacc
      961 tacaacagcg ccttgtcttc gccccgattc tcgagcgagg tcagccaaat tcccgaagac
     1021 cgcggcttga tcaaggcgag aataaggctg gcagtcggcg gtccctggac ctgagcggcc
     1081 ggctcacgcc ttcggccgct tgtcgatcac ccgacgcgcc ttgcccatcg agcgttcgat
     1141 aatgccgggt gcggcaattt cgaccgccgc cgatagcccg cacatcccct tcaggcgccg
     1201 cccaagctct tccgccgagc ggctggccgc ctcgccttcc agaaccatcc gcgcctcgac
     1261 ccgcaccaaa agatcgtcca gcgcgccgtc gcgcgtgagc tcgatcaaat agtgcccgct
     1321 cagcgccggg tcgcgcagga tctgctcctc gacctggctc gggaacagat tgacgccgcg
     1381 cacgatcagc atgtcgtcgc tgcggccggt gatcttggcc atgcgccgca tcgccgtgcg
     1441 tgatcccgcc atcaggtgcg tgagatcgcg cgtgcggtag cggacgaccg gcatggcctc
     1501 cttggtgagc gtggtgaaga ccagttcgcc cggttggcca tcgggcactg gcgtgcccga
     1561 ggcgggatcg acgacctcgg gatagaaatg atcctcccag atcgtcggac cgtccttgct
     1621 gtcgacgaac tcgcaggcga cgcccggccc catcacttcg ctcaagccgt aaaggtcgac
     1681 ggcatcgatg ccgagccgcc gttcgatctc ggcgcgcatg ccctcggtcc acggctcagc
     1741 gccgaagatg ccgatgcgca gcgccgtgtc gcgcggatcg acgccctggc gttcgaactc
     1801 gtcggcgatc gccagcatgt aggacggcgt catcagcacg acccgcgcgc cgaactcgcg
     1861 gatgagctgg acctggcgct cgccgaagcc gcccgacatc ggcaccacgg tgcagcccag
     1921 ccgctcggcg ccgtaatgca cgcccagccc gccggtgaac aggccatagc cgtaggcatt
     1981 gtggacgacg tcgcccggcc gcgcgccgcc ggcatggagc gagcgcgcca tgacgccggc
     2041 ccaggtgtcg atatcgtgcg ccgagtagcc gaccaccgtc ggccgaccgg tcgtgccgct
     2101 cgaggcgtgg aggcgcacgc acttctcacg cgcaatggcg agcatgccga aaggataggc
     2161 atcgcgcagg tcggccttcg aggtgaaagg aaagcgctcg aggtcttcga ggcggtgtaa
     2221 atcgtcggga tgcacgccag ctgcctggca cttggcccgg tagggcgctt gatgctggta
     2281 ggcgcggctg agcacgctct tgagacgctc gagctgcacg gcgcgcaagg catcgagcga
     2341 cagcttgatt tcggggaaca aatttatagt catgactgct tgcgttgtgc gtcgtcgaac
     2401 ccgtagcggc gataggcgta gcccagaccg accagcgccg cacccaggcc gaggaacgag
     2461 aacacgcgca gcaggccctg cagccccgcc atgtcgatca ggaagacctt ggcgacgacg
     2521 acgcagacca gcgccatgcc ggcatgccga agcgccgcta cgccgcgcac gaagcccacg
     2581 gccagcaagg cgacgccgaa cagcagccag acgatcgagt aggtgtagag ttccaggccg
     2641 gccgcgccga acccggcgcg cgcgaagcct ggatcgaaga cgtggcgcac ttccagcgag
     2701 acatagacga aggccaggat cgaggccgca gccccgacga ccagcgtcac gttcctgttg
     2761 ggctcgacgt cgatccagcg ccgcgccagc gccgccattg ccgccggcac ggcgtaggcc
     2821 aggaacaggc cgttggcgat cggcaggcgg ccgacatcga ccttctggga gaccggattg
     2881 gcgatgaaga cctggaccac gaggacggtc gccagcgcga gcgcgccgct tgcacgccac
     2941 gcccacaggg ccactggatc gcggcgggtg cgcgccagcc aaagcgctgc aagggcgaag
     3001 gcgccccacg ccagcacgta gaacgtccgc tccatgaagc ccgcgtcggc agccgccatg
     3061 gagccgggtt ggaagacgct gcgcacctcc agggtcgcca gcacgaaggt gagcagcgcc
     3121 accgcagcct cggttgcgcg caccagccgg tcgtcccccg tcggccgcaa gaagcgcagg
     3181 ctgaccatga gggccgcgat cgagaggcca taggcccaca ggatccagtt caagatcggc
     3241 gtgacgccca gcggatattt caggatctcg gggttgagca cgaagcgcac gacgacgacg
     3301 gcgagcagcg gccagcagag ctggcgcatg gccaaaagat cgagccgggc cgcgatggcg
     3361 gcaaccgcgg caaactcgat ggcgtaggcg acggtgatcc actcgcggct gagttcgagc
     3421 ggaatggcgg cggcgatgaa aaagaccacg cccgccgcca ggaagcccag cgcctcggtg
     3481 gcgccgggca tggttccgcg ccagcgcacc agccgttcgg cgccgaccag gaacggaacg
     3541 gcaagcccga tgctgatcag gccccacggt gtggtggtcg cgacgccgcg cagcacgtac
     3601 cagcagagaa gaaaatgagc gagcgcggcg gcgacggaga gcgctgccca aaagcccggc
     3661 cgggcggcgt tccacaacag cgcgaaggcg ccggcggcgt agaacccgcc gagcagaatc
     3721 gcggtccagg cgaagcgatc ggcgtcccag ccgctgcccg tgacgcgcga ggtgccccac
     3781 tacaacgcaa gtgctgcgat cgacaggagc ggcgccagtg ccgcgacgta ctggaagcgt
     3841 ggagtccagc gggcga
//
LOCUS       DASWGA010000639         3325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_74290, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000639 DASWGA010000000
VERSION     DASWGA010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3325
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74290"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..1122)
                     /gene="hppD"
                     /locus_tag="VF991_14930"
     CDS             complement(31..1122)
                     /gene="hppD"
                     /locus_tag="VF991_14930"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HEX9557786.1"
                     /translation="MASIKDLNVAEIDEANPMGTDGFEFVEYAAPDPAALGTLFEHMG
                     FVKVAKHRSKDVSLYRQGDVNFIVNAEKDSFAQGFARVHGPSICAIALRVKNSAFAYK
                     RALSLGAWGVEGKVGPMELNIPAIKGIGDSLIYLVDRYGERGTIYDVDFEYLPGVEHS
                     PKGVGLTYIDHLTHNVHRGRMAEWADFYERLFNFREIRYFDIEGKLTGLKSKAMTSPC
                     GKIRIPINESTDDKSQIQEYLSAYHGEGIQHIALGAGDIYETVETLKTKGVPFQTVPD
                     TYYEQIDTRLPGHGEDLQRLAADRILIDGAPTTGGGLLLQIFTQTVIGPIFFEIIQRR
                     GNEGFGEGNFRALFESIELDQIRRGVLKA"
     gene            1192..1653
                     /locus_tag="VF991_14935"
     CDS             1192..1653
                     /locus_tag="VF991_14935"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX9557787.1"
                     /translation="MADVAQALELEKFLPYRLSILAQIVSESLHDLYAGPFGLTVTQW
                     RVMAALGRFAPLTASDVGQRIVMDKVAVSRAVAGLMKRGLVERATDRNDRRRASLRLS
                     ARGRTMHARIVPLALDYEGRLYKALSAGDRRRFDALADRLFAHATQLRQAG"
     gene            1720..2190
                     /gene="aroQ"
                     /locus_tag="VF991_14940"
     CDS             1720..2190
                     /gene="aroQ"
                     /locus_tag="VF991_14940"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEX9557788.1"
                     /translation="MAAKAARRRPARKPVLVLNGPNLNMLGKRQPQIYGRETLADIEK
                     ACRAEAQRLGIAVEFTQSNHEGVLVDRIQAAREANCGIVINAGAYTHTSVALLDALNA
                     AELPVVEVHLSNIYKRESFRHHSYISPAAVGVIAGLGSHGYLLALQALSRLLAR"
     gene            2214..2669
                     /gene="accB"
                     /locus_tag="VF991_14945"
     CDS             2214..2669
                     /gene="accB"
                     /locus_tag="VF991_14945"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006934761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEX9557789.1"
                     /translation="MAKFDFDTEFVRKLAQILHETQLGEIELADGERRIRVARPAVTM
                     AATPVVAAPPGSPDGKAAAPAAAADDVAKHPGAVTSPIVGTAYLAPEPGKPNFVAVGD
                     KVTAGQTLLIIEAMKTFNPIKAPKAGTVARILIENAQPVEYGEPLMIVE"
     gene            2684..>3325
                     /locus_tag="VF991_14950"
     CDS             2684..>3325
                     /locus_tag="VF991_14950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEX9557790.1"
                     /translation="MFDKVLIANRGEIALRIHRACREMGIQTVAVHSTADSDAMHVRL
                     ADESVCIGPPPARESYLNIPRILSAATIAGVDAIHPGYGFLSENARFAEAVEAHGFTF
                     IGPTPEHIRIMGDKIVAKRTAKELGLPLVPGSPGPVASLEEVVTLGSKIGWPMLIKAV
                     AGGGGRGMKVVDDPDAAAEAFSLARAEAKAAFGNDSVYLEKYLDHPRHIEIQVL"
BASE COUNT          549 a         1094 c         1091 g          591 t
ORIGIN      
        1 cagttcttgg ccatggtttc ctcctttgct ctatgccttc agcacgccgc gacggatctg
       61 gtcgagctcg atcgattcga acagggcgcg gaaattgccc tcgccgaagc cttcgttgcc
      121 gcggcgctgg atgatctcga agaagatggg cccgatcacc gtctgggtga agatctgcag
      181 caagagcccg ccgcccgtgg tcggcgcgcc gtcgatcagg atgcggtcgg cagccaggcg
      241 ctgcaggtcc tcgccgtggc ccggcaggcg cgtgtcgatc tgctcataat aggtgtcggg
      301 cacggtctgg aacggcacac ccttggtctt cagcgtctcg accgtctcgt agatgtcacc
      361 ggcgccgagc gcgatgtgct ggatgccctc gccgtgatag gccgagaggt attcctggat
      421 ctgcgacttg tcgtcggtgc tctcgttgat cgggatgcgg atcttgccgc acgggctggt
      481 catcgccttg ctcttcaatc cggtgagctt gccctcgatg tcgaagtagc ggatttcgcg
      541 aaaattgaag agtcgctcgt agaagtcggc ccactccgcc atgcgtccgc gatggacgtt
      601 gtgggtcaga tggtcgatgt aggtaaggcc gacgcccttg ggactgtgct cgacgccggg
      661 caggtactcg aagtcgacgt cgtagatcgt gccgcgctcg ccgtaacggt cgaccaggta
      721 gatcaacgaa tcgccgatgc ccttgatcgc cgggatattg agctccatcg gcccgacctt
      781 gccctcgacg ccccaggcgc caagcgacag cgcccgcttg taggcgaagg ccgagttctt
      841 gaccctgagc gcgatggcgc aaatgctggg gccgtgcacg cgcgcgaaac cctgggcgaa
      901 gctgtccttc tcggcgttga cgatgaagtt gacgtcgccc tggcggtaga gcgagacatc
      961 cttggagcgg tgcttcgcaa ccttcacgaa gcccatgtgc tcgaacaacg tgccgagcgc
     1021 cgctggatcg ggtgctgcgt attcgacgaa ctcgaagccg tcggtgccca tcggatttgc
     1081 ttcgtcgatc tcggcgacgt tgagatcctt gatgctggcc atgcctgacc tctttggttg
     1141 gacgcgggcc gaattgacgg acgggacgaa ttagtttcaa atgtaactat tatggcagac
     1201 gtcgcgcaag ccctcgaact ggagaaattt ctcccctatc ggctgtcgat cctggcccag
     1261 atcgtctcgg aatcgctgca tgacctctat gccgggccgt tcgggctcac ggtcacgcag
     1321 tggcgggtga tggcggcgct gggccgcttt gcgccgctta ccgcctccga tgtggggcag
     1381 cgcatcgtca tggacaaggt ggcggtcagc cgggcggtgg cgggcctcat gaagcgcggc
     1441 ctggtcgagc gggcgaccga ccgcaacgac cgccgccgcg cctcgctcag gctctcggcg
     1501 cgcggccgca ccatgcatgc gcgcatcgtg ccgctggcgc tcgactacga gggccggctc
     1561 tacaaggcgc tgtcggccgg ggacagacgg cgcttcgatg ccctggcgga tcgcctgttt
     1621 gcccacgcca cgcaactgcg gcaggccggc tgagcctgcc ttgtggcccg gattcgccat
     1681 gctataacgc ccggcgcttt aaagacgggg aggcacgatt tggccgcgaa ggccgcccgg
     1741 cgtcggccgg cacgcaagcc ggtgctggtg ctcaacgggc ccaatctcaa catgctgggc
     1801 aagcggcagc cgcagatcta cggccgcgag accctggccg acatcgagaa ggcctgccgg
     1861 gccgaagccc aacgcctggg gatcgccgtc gagttcaccc agagcaacca cgagggcgtg
     1921 ctggtcgatc gcatacaggc cgcgcgcgag gccaattgtg gcatcgtcat caatgccggc
     1981 gcctacaccc atacctccgt cgccctgctc gatgctctca atgccgccga gctgccggtg
     2041 gtcgaggtgc atctttccaa catctacaag cgtgaaagct tccgccatca ctcctatatc
     2101 agtccggctg cggtcggcgt gatcgcgggg ctgggcagcc acggctacct tctggcgttg
     2161 caggcattgt cgcgccttct ggcgcgctga cattcaccgc ggagcccctc tccatggcaa
     2221 agtttgattt cgataccgag ttcgtccgca agctggcgca aatcctccac gagacccagc
     2281 tcggcgagat cgagctggcc gacggcgagc ggcggatccg cgtcgcccgg ccggccgtga
     2341 cgatggcggc tacgccggtc gtggcggcgc ctcccggctc acccgacggg aaggctgctg
     2401 caccggcagc cgcggccgac gacgtcgcca agcatcccgg cgcggtaacc tcgccgatcg
     2461 tcggcaccgc ctatctcgcg cccgagcccg gcaagcccaa cttcgtcgcg gtcggcgaca
     2521 aggtgacggc gggccagacg ctgctgatca tcgaggcgat gaagacgttc aatccgatca
     2581 aggcgcccaa ggcaggcacg gtggcgcgca tcctgatcga gaacgcgcag ccggtggagt
     2641 acggcgagcc gttgatgatc gtcgaatagg acgcccgcag gcgatgttcg acaaggtcct
     2701 gatcgccaac cgcggcgaga ttgcgctgcg catccatcgc gcctgccgcg agatgggcat
     2761 ccagaccgtg gcggtccatt cgacagccga cagcgacgcc atgcatgtcc ggctggccga
     2821 cgaatcggtc tgcatcggcc cgccgccggc gcgcgagagc tatctcaaca tcccgcgcat
     2881 cctctcggcc gcgaccattg ccggcgtcga tgccatccat cccggctacg gcttcctgtc
     2941 ggagaacgcc cgcttcgccg aggccgtcga ggcgcacggc ttcaccttca tcggccccac
     3001 gcccgagcac atccggataa tgggcgacaa gatcgtggcc aagcggaccg ccaaggagct
     3061 cggcctgccg ctggtcccgg gctcgcccgg cccggtggcc tcgctcgaag aggtggtgac
     3121 gctcggcagc aagatcggct ggccgatgct gatcaaggcg gttgccggcg gcggcgggcg
     3181 cggcatgaag gtggtcgacg accccgatgc ggcggccgag gcgttttcgc tggctcgtgc
     3241 cgaggccaag gccgccttcg gcaacgattc ggtctatctc gaaaagtatc tcgaccatcc
     3301 gcgccacatc gagatccagg tgctg
//
LOCUS       DASWGA010000640         6127 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1461595, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000640 DASWGA010000000
VERSION     DASWGA010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6127
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1461595"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..547
                     /locus_tag="VF991_14955"
     CDS             <1..547
                     /locus_tag="VF991_14955"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEX9557791.1"
                     /translation="DDSLLAFDTGPGNGPIDDWCARRAGLHFDKDGALAASGRVDRTR
                     LERFTEHRYFSCKPPKSLDRGDFNDSWANGLSVADGAATLTRGTARAIALAARLFPAP
                     VAQWIITGGGARNPTLLAAVAEETRATVVTADSLGWNGDAMEAQAFGFLAVRSLLGLP
                     ISFPGTTGAPRPLTGGRLNLP"
     gene            complement(565..1239)
                     /locus_tag="VF991_14960"
     CDS             complement(565..1239)
                     /locus_tag="VF991_14960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9557792.1"
                     /translation="MPDVMFTGPEGRLEGRYHQSKEEHAPIALILHPHPQYGGTMNHK
                     VVFSLFHVFVNRGFSVLRFNTRGVGRSQGRFDNGMGELSDAAAALDWLQGMNADAKSC
                     WIAGYSFGAWIGMQLLMRRPEIDCFVSVAPPANSYDFAFLAPCPSSGLIVGAEKDEVV
                     PLADIQKLVARLSLQKGITVESRTIKGANHFFHDSLDKLAVEVDKYVAKSLLNPPGRA
                     TSNKEP"
     gene            1452..1928
                     /locus_tag="VF991_14965"
     CDS             1452..1928
                     /locus_tag="VF991_14965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX9557793.1"
                     /translation="MKLSTKGRYAVMAMVDLARHAQAKPVSLSDIATRQEISLSYLEQ
                     LFARLRRAGLVKSVRGPGGGYRLARGSNETRVSEIILAVDEPIKATRCTEMGTAGCRA
                     DRSKCLTHDLWEELGNQIHAFLDSVTLLDVLDRRLSTRIAEARSVANSDSSMVAAG"
     gene            1939..3057
                     /locus_tag="VF991_14970"
     CDS             1939..3057
                     /locus_tag="VF991_14970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HEX9557794.1"
                     /translation="MRAFAYLDHNATSPLRPAAFDAMVEALRAGGNPSSVHRSGRTAR
                     GIVDAAHRQVATLAGALPTEIVFTSGGTEANNMAIGGSGRGRVLVSAVEHDSVLRATP
                     HAEIIPVDGEGVVDLAALERLLAASDEPALVSVMFANNETGVLQPIADVARVARRAGA
                     LVHCDAVQGAGKAPIDLPDLGVDYLSLSAHKFAGPTGVGALVIRSGAPFGPDRRGGGQ
                     ESYRRAGTENVAGIAGFGAAATEARDGLKVEVLRDHLEASLLAIAPQARVFGAGARRL
                     GNTTCISMPGVKAETQVMALDLAGVCVSAGAACSSGKVQRSAVLRAMNVQDSEAATVI
                     RISCGWNTESDDIERLIAAWRDLYIRVAHSDLMRARAA"
     gene            3076..4314
                     /locus_tag="VF991_14975"
     CDS             3076..4314
                     /locus_tag="VF991_14975"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007116688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HEX9557795.1"
                     /translation="MTAITQIRRNDQPIYLDYQATTPMDPRVLEAMMPYFTHKFGNPH
                     SRSHSYGWEAEEAVEKARAQVAKLIGADEKEVIFTSGATESNNLAIRGVAEFYKDRKN
                     HIVTTVTEHKCVLDTCRHLEQQGFEVTYLPVQKNGLIDLEVLRAAVTDKTVLVSIMAV
                     NNEIGVIQPLAEIGKICREKKAFFHTDAAQAAGKIPLDVEAMSIDLMSISGHKIYGPK
                     GIGALYVRRKPRIRLVPLIVGGGQERGFRSGTLPTPLCVGLGEAAEIAMKEMDAESKR
                     LAKLQARMLKGLNAKLTDIHVNGDLEHRIPGNLNIGFAYVEGESLMMGIKGLSVSSGS
                     ACTSASLEPSYVLRALGVEEDMAHTSLRIGLGRFTTEHEVDTAVDELVHHVNKLRAMS
                     PLWEMAQEGIDIKSIEWAAH"
     gene            4343..4753
                     /gene="iscU"
                     /locus_tag="VF991_14980"
     CDS             4343..4753
                     /gene="iscU"
                     /locus_tag="VF991_14980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002634235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HEX9557796.1"
                     /translation="MAYSEKLIDHYENPRNIGSLDKSSEDVGTGLVGAPACGDVMKLQ
                     IKVGPDGLIEDAKFKTFGCGSAIASSSLVTEWVKGKTIDEAETIKNTDIAKHLALPPV
                     KIHCSVLAEDAIKAAIADYRAKTTKKDEAQQAAE"
     gene            4772..5179
                     /locus_tag="VF991_14985"
     CDS             4772..5179
                     /locus_tag="VF991_14985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HEX9557797.1"
                     /translation="MSTTTETSQPATPAAPAPAPRVRRPRPQVMSVTPAAAERVKALI
                     EGRGKPTAGIRIGVRSKGCSGMSYTLEFADSQQPMDEVVDTQGVKLLIDPKASLFLIG
                     TEMDYEEEKLKSGFVFRNPNEKGRCGCGESFHV"
     gene            5189..5701
                     /gene="hscB"
                     /locus_tag="VF991_14990"
     CDS             5189..5701
                     /gene="hscB"
                     /locus_tag="VF991_14990"
                     /inference="COORDINATES: protein motif:HMM:TIGR00714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HEX9557798.1"
                     /translation="MDHFARLGLPAALDLEPATLDRAYFALQRQWHPDRFANRPAEER
                     ARSSTEAAALNDAYRTLKDPLSRAVYFAGLKGVELPGDGKTIDDPDLLMEAMEAREAL
                     HEAITVEAVDRLAAEARDDMKNSLAGLGGLFLRDDKPAIRKALLRLRYLDKFAEEARA
                     RRTNLERVKA"
     gene            5698..>6127
                     /locus_tag="VF991_14995"
     CDS             5698..>6127
                     /locus_tag="VF991_14995"
                     /inference="COORDINATES: protein motif:HMM:NF012242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HEX9557799.1"
                     /translation="MSLLEIHEPGETPLPHAGEGSLAVGIDLGTTNSVVAIARDGKPA
                     ALHDETGRALVPSVVAYPASGGVLVGDEARLLMPQEPRNVVASVKRLMGRGAADLHAV
                     AGVLPYEVEPGSGETDMVKLRIGGRPRSPVEISAEILKALR"
BASE COUNT         1070 a         1990 c         2042 g         1025 t
ORIGIN      
        1 cgacgacagc ctgctcgctt tcgacaccgg accgggcaac ggtccgatcg acgattggtg
       61 tgcccggcgt gccggcctgc acttcgacaa ggatggtgcg ctcgccgcgt ccggccgggt
      121 cgaccgcacg cgtctcgaac gtttcaccga gcatcgctac ttttcatgca agccgcccaa
      181 gtcgctcgac cgcggcgatt tcaacgattc gtgggccaac ggtctcagcg ttgccgatgg
      241 cgcggcgacc ctgacgcgcg gcacggcgcg cgccatagca cttgccgccc ggctgttccc
      301 cgcgccggtc gcgcaatgga tcatcaccgg cggcggcgcg cgcaatccca cgctgcttgc
      361 ggccgtcgcc gaggagacgc gggcgacagt ggtgacggcc gacagtctcg gctggaacgg
      421 cgatgcgatg gaagcgcagg ccttcggctt cctcgccgtg cgctcgctgc tcggcctgcc
      481 gattagcttt cccggcacca ccggcgcgcc gcgtccgctg accggcggcc ggctcaattt
      541 gccgtaaccg tcggcgacga aaggctaagg ctctttattg ctcgtcgcgc ggccgggcgg
      601 attgagcagg cttttggcga cgtacttgtc gacctcgacg gcaagcttgt cgagcgagtc
      661 gtggaagaag tggttggcgc ctttgatggt gcgcgattcc acggtgatgc ccttctgcag
      721 cgacagccgc gcgaccagct tctggatgtc ggcgagcggc acgacttcgt ccttttccgc
      781 gccgacgatc aggccggacg aggggcaggg cgccaggaag gcgaaatcgt aggagtttgc
      841 cggcggggcg accgagacga aacagtcgat ctccggacgg cgcatcaaga gctgcatgcc
      901 gatccaggcg ccgaacgagt agcccgcgat ccagcacgac ttggcgtcgg cattcatgcc
      961 ctgcagccag tcgagcgccg cggcggcgtc gctcagttcc cccatgccgt tgtcgaagcg
     1021 gccctggctg cggccgacgc cgcgggtgtt gaagcgcaac accgagaagc cgcggttcac
     1081 gaagacatgg aacagcgaga agacgacctt gtggttcatc gtcccgccat attggggatg
     1141 gggatgaaga atcagcgcga tgggcgcatg ttcttccttg ctctggtgat agcggccctc
     1201 cagacgccct tccgggccgg tgaacatcac atcgggcatc tagactccgg ttttcctcat
     1261 tattggccgc cgtttggggc gccgaggagc gatttttcgg gggattcttg atacttgacc
     1321 aaccgactcg ggtttactaa accctaccgg agcagttggt ttttccccag atccctgcgt
     1381 gggggtccgc aatatcgtag caaggccttg gttttcaaga cctttcggcg cttgctcatg
     1441 aggaggttgc tgtgaagctc agcaccaagg gtcgttacgc cgtgatggcg atggtcgatc
     1501 tggcgcgtca tgcgcaggcc aagccggtgt cgctgtcgga tattgccacc cgacaggaaa
     1561 tctctttgtc ctatctggag cagctctttg cccgcctgcg ccgtgccggc ctggtgaaga
     1621 gcgttcgtgg cccaggcggc ggctatcgcc tggcccgcgg ctccaacgag acgcgtgtct
     1681 cggagatcat cctggcggtc gacgagccga tcaaggcgac acgctgcacc gagatgggta
     1741 ccgccggctg ccgtgccgat cgcagcaaat gcctgaccca cgatctgtgg gaggagctcg
     1801 gcaaccagat ccacgcgttc ctggactcgg tcaccttgct cgacgtgctg gaccgcaggc
     1861 tcagcacccg catcgccgag gcgcggagtg tggccaattc ggactcgtcg atggtcgccg
     1921 cgggctaggg tcatcgtcat gcgcgcgttc gcgtacctgg atcacaacgc caccagcccg
     1981 ctgcggccgg ctgccttcga cgccatggtc gaggcattgc gcgccggcgg caatccttcg
     2041 tcggtgcacc gatccggccg cacggcgcgc ggcatcgtcg atgcggcaca ccggcaggtg
     2101 gcaacgttgg ccggcgcctt gccgaccgaa atcgtgttca cctcgggcgg caccgaagcc
     2161 aacaacatgg cgatcggcgg cagcggccgc gggcgcgtgc tggtctccgc cgtcgagcac
     2221 gacagcgtgc tgagggccac gccacacgcc gaaatcattc cggtcgatgg cgagggcgtg
     2281 gtggatctgg cggcgctcga gcgcttgctt gcggcctcgg acgaacccgc gttggtgtcg
     2341 gtgatgttcg ccaacaacga gaccggggtg ctgcagccga tcgccgacgt tgctcgtgtg
     2401 gcgcgccgcg ccggtgcgct cgtccattgc gacgcggtgc agggcgccgg caaggcgccg
     2461 atcgatctgc ctgacctcgg cgtcgactat ctcagcctct cggcgcacaa gtttgccggg
     2521 cccacgggcg ttggcgcgct ggtgatccga agcggcgctc cgtttggacc cgatcggcgg
     2581 ggcggcggcc aggaatccta tcgtcgcgcc ggtaccgaga acgtggccgg cattgccggt
     2641 ttcggcgctg cggccaccga ggctcgagat ggcctcaagg tcgaagtgct gcgcgaccat
     2701 ctcgaggcgt cgctgctggc catcgcgccc caagcgcggg tgttcggcgc gggcgcacgg
     2761 cggctcggca acacgacctg catttccatg ccgggcgtga aggccgagac ccaggtcatg
     2821 gcgctcgatc ttgccggtgt ctgtgtcagc gccggcgccg cctgctcgtc gggcaaggtg
     2881 cagcgctcgg cggtgcttcg cgccatgaac gtacaagact cggaggccgc aacggtgatc
     2941 agaataagtt gcggctggaa cacagaatct gacgatatcg aacgcttgat cgcggcctgg
     3001 cgggacctat atatccgagt agcgcactcg gatttaatgc gtgcccgggc agcctaggaa
     3061 tttcaagggg ttagcatgac tgccattacc cagattcggc gcaacgacca gccgatctac
     3121 ctcgattacc aagccaccac gccgatggat ccgcgcgtcc tggaagcgat gatgccttac
     3181 ttcacccaca agttcggcaa cccgcattcg cgcagccatt cctacggctg ggaggccgaa
     3241 gaggcggtcg agaaggcgcg cgcccaggtc gccaagctga tcggcgccga cgagaaggaa
     3301 gtgatcttca cctccggcgc caccgagtcg aacaacctcg ccatccgcgg cgtcgccgag
     3361 ttctacaagg accgcaagaa ccacatcgtc accaccgtga ccgagcacaa gtgcgtgctc
     3421 gatacctgcc gccatctcga gcagcagggc ttcgaggtga cgtacttgcc ggtccagaag
     3481 aacggcctga tcgatctcga ggtgttgcgc gccgccgtca ccgacaagac ggtcctcgtt
     3541 tcgatcatgg cggtgaacaa cgagatcggc gtcatccagc cgctcgccga gatcggcaaa
     3601 atctgccgtg agaagaaggc cttcttccac accgacgccg cccaggccgc tggcaagatc
     3661 ccgctcgacg tcgaggcgat gagcatcgac ctcatgagca tctcgggcca caagatctac
     3721 gggcccaagg gcatcggcgc gctctacgtg cgccgcaagc cgcgcattcg cctggtgccg
     3781 ctgatcgtcg gcggcggcca ggagcgcggc ttccgctcgg gcacgctgcc gacgccgctt
     3841 tgcgtcggcc tgggcgaagc ggcagagatc gccatgaagg aaatggacgc ggagtccaag
     3901 cggctggcca agctgcaggc ccgcatgctg aagggcctca atgccaagct gacggacatc
     3961 cacgtgaacg gcgatctcga acatcgcatt ccgggcaacc tcaacatcgg cttcgcctat
     4021 gtcgaaggcg agtccctgat gatgggcatc aagggcctgt cggtgtcgtc cggctcggcc
     4081 tgcacctctg cttcgctcga gcccagctac gtgctgcgcg cgctgggcgt ggaggaggat
     4141 atggctcata cctccttgcg catcggcctc ggccgcttca ccaccgagca tgaggtcgac
     4201 accgccgtcg acgagctggt gcatcacgtc aacaaactgc gcgcgatgag cccgctctgg
     4261 gagatggccc aggaaggcat cgatattaag tccatcgaat gggccgccca ctgacggccc
     4321 atcgggaatt gaggagacag tcatggccta cagcgaaaag ctgatcgatc actacgagaa
     4381 tccccgcaac atcgggtcgc tcgacaagag ttccgaggac gtcggcaccg gcctggtcgg
     4441 cgcgccggct tgcggcgacg tcatgaagct gcaaatcaag gtcggccccg acgggctgat
     4501 cgaggatgcc aagttcaaga ccttcggttg cggctcggcg atcgcgtcct cctcgctcgt
     4561 caccgagtgg gtcaagggca agacgatcga cgaggccgag acgatcaaga acaccgacat
     4621 cgccaagcac ctggcgttgc cgccggtgaa gatccactgc tcggtcctgg ccgaggacgc
     4681 gatcaaggcg gcgatcgccg actatcgcgc caagacgacc aagaaggacg aggcccagca
     4741 ggccgccgaa tagattgcgg agcacgagcg tatgagcacg accacggaga cttcccagcc
     4801 ggcgacgccg gccgcgccgg cacccgctcc acgggtccgc cggccgcggc cgcaggtcat
     4861 gagcgtgacg ccggccgccg ccgagcgggt gaaggcgctg atcgaaggcc gcggcaagcc
     4921 gaccgccggt attcgcatcg gcgtgcgcag caagggctgc tcgggcatgt cctatacgct
     4981 cgaattcgcc gacagccagc agccgatgga cgaggtcgtc gacacgcagg gtgtgaagct
     5041 cttgatcgac cccaaggcat cgctgttcct gatcggcacc gagatggact acgaggaaga
     5101 gaagctgaag tcgggtttcg tgttcaggaa tcccaacgag aagggccgct gcggctgcgg
     5161 cgaatccttc cacgtctgaa gagttgatat ggaccatttc gcgcggctgg gattgccggc
     5221 ggcgctcgac ctggagcccg cgacgctcga ccgggcctat tttgcgctcc agcgccagtg
     5281 gcatcccgac cgtttcgcca accgtccggc cgaggagcgc gcgcggtcct cgaccgaagc
     5341 ggccgctctg aacgacgcct atcgcacgct caaggacccg ctgtcgcggg ctgtctattt
     5401 cgcaggcttg aagggcgtcg agctgcccgg cgacggcaag acgatcgacg atcccgacct
     5461 cctgatggag gccatggaag cccgcgaggc gctgcacgag gcgatcaccg tcgaggcggt
     5521 cgacaggctg gctgccgagg cccgtgacga catgaagaat tcactggccg gccttggcgg
     5581 tttgttcttg cgggacgaca agcccgccat cagaaaggcg ctccttcgcc tgcgctacct
     5641 cgacaagttc gccgaggagg cgcgggcgcg gcgcaccaat ctcgaacgag tgaaggcatg
     5701 agtctgttgg agatccacga gccgggcgaa acgccgttgc cgcatgccgg cgagggctcg
     5761 ctggcggtcg gcatcgatct cggcacgacc aactcggtgg tggcgatcgc ccgcgacggc
     5821 aagccggccg cactgcatga cgagaccggc cgtgcgctgg tgccctcggt cgtcgcctat
     5881 ccggcatcgg gcggcgtgct ggtgggcgac gaggcgcgtc ttctcatgcc tcaggagccc
     5941 aggaacgtcg tcgcctcggt gaagcggctg atgggccgcg gcgccgccga cctgcacgcg
     6001 gtggctggcg tgctgcccta tgaggtcgag ccgggcagcg gcgagaccga catggtgaaa
     6061 ctgcggatcg gcggtaggcc acgctcgccg gtcgagatct ccgccgagat cctgaaggcc
     6121 ttgcgcg
//
LOCUS       DASWGA010000641         3657 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1842171, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000641 DASWGA010000000
VERSION     DASWGA010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3657
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1842171"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VF991_15000"
     CDS             <1..256
                     /locus_tag="VF991_15000"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9557800.1"
                     /translation="TTDLADFEVVFWQAMVVPAGTPKPIVGKLQAVIAKVAADPDMIQ
                     RFKLQGVEIRSSTPAELKDWYLKEEKRWTTLIKEQAIKVE"
     gene            complement(260..844)
                     /gene="alkB"
                     /locus_tag="VF991_15005"
     CDS             complement(260..844)
                     /gene="alkB"
                     /locus_tag="VF991_15005"
                     /EC_number="1.14.11.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA oxidative demethylase AlkB"
                     /protein_id="HEX9557801.1"
                     /translation="MLLRGRALAVDTTLLAAIEAIAAQAPFRRMVTPGGFEMSVAMTN
                     CGRAGWVTDRTGYRYDPRDPESGAPWPAMPEVFLTLARDAAADAGFTGFTPDACLINC
                     YEPGTRLSLHQDKDEQDYRHPVVSVSLGLPATFQFGGLKRSDRPRKVALQHGDIVVWG
                     GPARLVFHGVLALKDGEHPLTGRRRFNLTFRKAL"
     gene            773..1549
                     /locus_tag="VF991_15010"
     CDS             773..1549
                     /locus_tag="VF991_15010"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX9557802.1"
                     /translation="MRRNRLDRREQRRVDGQSPAPQQHGALAQRLPCLEVEQIGHHRL
                     NRTTKIGIPVRWRSVGWRGGAYGPGLDDPTMEKTMANTIRYAAGQSSLGPFVAALSDR
                     GLAMVAFGAANEADLTARFANADLVEDPAALQETLGKLAGLIDHPETSAEFALDLQGS
                     PFELKVWQALREIPAGTTATYGEIAARIGSPREARDVGEACAANKLAVVVPCHRIVKK
                     DGLISGYRWGVKRKRALLEREHRARLLQPSAVVPHETAST"
     gene            1567..1950
                     /locus_tag="VF991_15015"
     CDS             1567..1950
                     /locus_tag="VF991_15015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEX9557803.1"
                     /translation="MKFWTGAAAAVLAILAAGQAFAQSGDAGRGQRLFNQQCRACHTL
                     EQGGASVTGPNLHGLFGRKAGTLAGYEFSEAMTKSGIVWDETTLADYNRDPHAKVPGT
                     KMVYGGMKQPGQLADLLAYLKQATQ"
     gene            complement(1931..3145)
                     /locus_tag="VF991_15020"
     CDS             complement(1931..3145)
                     /locus_tag="VF991_15020"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557804.1"
                     /translation="MASKLPLLALLIAVTCLSQFYRVSNSVIAPELTRDLGLSARQLG
                     WAGSAFFFALFAVQVPVGMWFDRYGARRTVAALSLLAVAGALWIAVSADAVDLIGGRA
                     VVGVGCAASFMSVVFLCSRWFEPAKLATALSWVFAASNIGTLAAATPLAWIAATVGWR
                     NGFVGLAAVTVLVALAFYAIVRDRPTDQAAPMARRENLGEIAKGLLEVWTTPGLGPVL
                     AMHFFAYATMLTVLGVWGGPYLYDVHKLDAVERGNVLLAMGVAQILGILAYGPMDRLL
                     RSRKKAVLGGTAISMALLAALALLPKPPLAIAVVLLAAFCFFCAFGTVIVAQGRTLFP
                     DRLAGRGVTTVNMAQCLGLTVLPALVGYIVEAFGNSDLAYRVAFGALAIGLALGASVY
                     IRSRDSATALPA"
     gene            3300..>3657
                     /locus_tag="VF991_15025"
     CDS             3300..>3657
                     /locus_tag="VF991_15025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557805.1"
                     /translation="MLAPALLLFVLFFVLPFGVMAAMSFYSANPVTNPNAFLTTRHYE
                     RFIFDSAGIYHDALWATLRIGLITTIVSLLIGYPLAHWMARMQSRLGHALVLMAVIAP
                     MLTGIVVRTFAWMTILQ"
BASE COUNT          684 a         1239 c         1191 g          543 t
ORIGIN      
        1 gacgaccgac cttgccgact tcgaggtggt gttctggcag gccatggtgg tgccggccgg
       61 cacgcccaag ccgatcgtcg gcaagctgca ggccgtcatc gccaaggtcg cggctgaccc
      121 cgacatgatc cagcgcttca agcttcaggg cgtcgagatc cgcagctcca cgcccgccga
      181 gctcaaggac tggtacctca aggaggagaa gcgctggacg accttgatca aggagcaggc
      241 catcaaggtc gaataaacgt cacagcgctt tcctgaacgt cagattgaag cggcggcggc
      301 cggtcagcgg atgctcgccg tccttcagcg ccagcacgcc gtgaaagacg aggcgcgccg
      361 ggccgcccca cacgacaatg tcgccgtgtt gcagcgctac cttgcgaggc cggtcgctgc
      421 gcttcaggcc accgaactgg aaggtggccg gcaggccaag cgacaccgac acgacgggat
      481 ggcgatagtc ctgctcgtcc ttgtcctggt gcagtgacag ccgtgtgccg ggctcgtagc
      541 agttgatcag gcaggcgtcg ggcgtgaagc cggtgaaacc cgcatcggcg gcggcgtcac
      601 gcgccaaggt caaaaacacc tccggcattg ccggccacgg cgcaccgctt tcgggatcgc
      661 gcggatcgta gcggtagccc gtgcggtcgg tgacccagcc cgcccggccg caattggtca
      721 tcgccaccga catctcgaag ccgcccggcg tcaccatgcg ccggaacggc gcttgcgccg
      781 caatcgcctc gatcgccgcg agcaacgtcg tgtcgacggc caaagcccgg ccccgcaaca
      841 gcacggcgcc ctcgcacagc gtttgccttg tctcgaggtc gaacagatcg gccatcaccg
      901 cctcaatagg acgacaaaaa tcggaattcc agtccgctgg cggagcgtcg gatggcgtgg
      961 aggtgcctat ggtccgggcc tcgatgatcc aacgatggag aagaccatgg caaacaccat
     1021 ccgctatgcc gcaggacaaa gctccctcgg ccccttcgtc gccgcgttgt ccgaccgcgg
     1081 tttggcgatg gtggcgttcg gcgcggcaaa cgaggccgac ttgacggcac gcttcgccaa
     1141 cgccgacctg gtcgaagacc cggccgcgct gcaagagact ctcggcaagc tcgccggcct
     1201 gatcgaccat ccggaaacca gcgccgaatt cgcgctcgac ctgcaaggtt cgccgttcga
     1261 gctgaaagtg tggcaggcgc tgcgcgagat tcctgccggc acgaccgcga cctacggtga
     1321 gatcgccgca cgcatcggct cgccgcgcga ggcccgcgac gtcggtgaag cctgcgccgc
     1381 aaacaagctc gctgtcgtcg tgccgtgtca ccgcattgtg aaaaaggacg gcttgatctc
     1441 cggctatcgc tggggcgtca agcgcaagcg cgccctgctc gagcgagaac acagggcgcg
     1501 cctcttgcag ccgtcggctg tggtcccaca tgaaactgca tcgacctaag cgccaggagc
     1561 agcgtgatga aattttggac aggtgcggca gcggcagttc tcgcgatcct tgcagccggc
     1621 caggccttcg cgcaatcggg cgacgccggc cgcggccagc ggctgttcaa ccagcaatgc
     1681 cgcgcctgtc atacgctcga gcaaggtggc gccagcgtca ctggccccaa cctgcacggc
     1741 ctgttcggcc gcaaggccgg cactctggcg ggctatgagt tctccgaggc gatgaccaag
     1801 tcgggcatcg tctgggacga aacgacgctc gccgactaca accgcgatcc ccacgccaag
     1861 gtgcccggca ccaagatggt ctatggcggc atgaagcagc ccggccagct cgccgacctt
     1921 ttggcctatc tcaagcaggc aacgcagtag cgctgtcgcg cgagcggata tagacgctgg
     1981 cccccaaagc cagcccgatc gccagagccc cgaaggccac gcgataggcg aggtcggaat
     2041 tgccgaacgc ctcgacgatg tagccgacca gagccggcaa cacggtgagg ccgaggcact
     2101 gcgccatgtt gaccgtggtg acgccgcggc cggccaggcg gtcgggaaag agcgtgcgac
     2161 cctgcgccac gatcaccgtg ccgaaggcgc agaagaagca gaaggcggcg agcagcacga
     2221 cagcgatcgc aagcggcggc ttgggcagca gcgcgagcgc ggcaagcagc gccatcgaaa
     2281 tcgcggttcc gcccagcacg gccttcttgc gcgaacgcag gaggcggtcc atcggcccgt
     2341 acgccaggat gcccaggatc tgcgccacgc ccatggccaa aagtacgttg ccgcgctcca
     2401 cggcatcgag cttgtgcacg tcgtagagat agggaccgcc ccacacgccc agcacggtga
     2461 gcatggtcgc gtaggcgaag aaatgcatgg cgagcaccgg tcccagacca ggcgtcgtcc
     2521 agacttccag cagccccttg gcgatctcac cgaggttttc ccgccgggcc attggtgcgg
     2581 cctgatcggt cggtcggtcg cgcacgatgg cgtaaaacgc cagcgcaacc agcacggtga
     2641 cggcggcgag gccgacaaag ccattgcgcc agccgacggt cgcggcgatc caggcaagcg
     2701 gcgtggcggc ggccagggtg ccgatgttgg aggcggcgaa cacccaggac agcgcggtcg
     2761 ccagtttcgc cggctcgaac cagcgcgagc acaggaacac caccgacatg aaggaggcgg
     2821 cgcagcccac gccgaccacg gcgcggccgc cgatcaggtc gaccgcgtca gccgatacgg
     2881 cgatccacaa cgcgccggcc acggcgagca acgaaagggc cgccaccgtg cggcgcgcgc
     2941 cgtaacggtc gaaccacatg ccgaccggca cttgtacggc gaacaaggcg aagaaaaagg
     3001 cgctgcccgc ccagccgagc tggcgggcgc tgaggccgag atcgcgtgtg agctcgggcg
     3061 cgatcacgct gttggagacg cggtagaact ggctgaggca ggtgacggcg atcagcaaag
     3121 cgagaagcgg caatttcgat gccatggcgc ggctgcctag catgaggggt cgcaccctgt
     3181 ccttcggcgt ggaccgaagc atcgccttcg gccaccatac gaaacccatg gtcgccgtcg
     3241 ccacctcccg atccgcaccg atcgctgtcg ccccatcgcg acccgcaccg atcgcctggt
     3301 tgctggcgcc ggcgctgctg ctgttcgtgc tgttcttcgt gttgccgttc ggagtcatgg
     3361 cggcgatgtc gttctattcg gccaatccgg tcaccaatcc caatgccttc ctgacgacac
     3421 gccactacga gcgcttcatc ttcgattccg ccggcatcta ccatgacgcc ttgtgggcga
     3481 ccctgcgtat cggcctcatc accacgatcg tctcgctgct gatcggctat ccgctggcgc
     3541 actggatggc gcgcatgcaa tcgcggttgg gtcacgctct ggtgctgatg gcggtgatcg
     3601 cgcccatgct gaccggcatc gtcgtgcgca ctttcgcctg gatgaccatc ctgcagg
//
LOCUS       DASWGA010000642         2529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1719614, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000642 DASWGA010000000
VERSION     DASWGA010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1719614"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1343)
                     /locus_tag="VF991_15030"
     CDS             complement(<1..1343)
                     /locus_tag="VF991_15030"
                     /inference="COORDINATES: protein motif:HMM:NF019011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M81 family metallopeptidase"
                     /protein_id="HEX9557806.1"
                     /translation="MKKIFTACLGTETNTFASIPTGHQLFEETCLFRNASYGKNVPMF
                     GAPLAVWRGRAEAKGWQVVESLCAFAMPAGKTVKKVYEAFRDEILADLKAAMPVDGVL
                     LSMHGAMVAEGYDDCESDLLATVRKVVGPDIPVGAELDLHCNIGEGTLRDATALVLFK
                     EYPHVDVPERADDLFTVMEGAIEGRTRPVMAAWDCRMIGVFHTTRQPMRGFVDKLSAM
                     EGKDGVLSLSIAHGFPWSDIKEMGSKLIAITDGDRPKAERLARELGREFFAMRQATQP
                     PYVSLEAAMARVSSHNLPKPMVLADVSDNAGGGAASDSTFVLKALLDRKVKDAAIGMI
                     WDPGAVKLAFEVGEGAELDVRLGGKLGPQSGPPVDARAKVLKVEKSVSIEFGGERKSV
                     GSIGDAAALQIEGVTVIVNSKRTQCLSRDCFTKLGVDPATKKVVVVKSMQHFHAA"
     gene            complement(1386..>2529)
                     /locus_tag="VF991_15035"
     CDS             complement(1386..>2529)
                     /locus_tag="VF991_15035"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9557807.1"
                     /translation="GLAHARAIDRGPLGCLVLHGEPPAAVSLPPHTPAPALLPDIAGP
                     EVVEPGQPTLKQALDRVFAETAAAPHRNTKAVVVVHNGRVIAERYAPGYGIDTQVIGW
                     SATKSVTNALIGILVRQGKLSLEGPAPIAAWSDLRDPRHAISIDNLLRMNSGLDIGDS
                     LTARASSAFDPSAYMVFGVRDMAAFAEQASIKAAPGTSWNYTNGNTLLLSKIIRDKTG
                     GDAASVLAFARRELFDKLGMRHVTLEFDAVGTPIGSSHMLASARDWARFGLLYLNDGV
                     VGGERLLPPGWVDYSAAPTPGSERYGYAAGFWTNRGDGEGQRYRIARGIPADAFFARG
                     ATGQYVIVVPSQRLVVARFGSAFTPRDDLDVVARLVADVIATMPPS"
BASE COUNT          413 a          823 c          888 g          405 t
ORIGIN      
        1 taggcagcgt ggaaatgctg catggatttc acgaccacga ccttcttggt cgcgggatcg
       61 acgcccagct tggtgaagca gtcgcggctc agacattgcg tgcgcttgct gttgacgatc
      121 accgtcactc cctcgatctg cagcgccgcg gcatcgccga tagagcccac gctcttgcgc
      181 tcgccgccga actcgatgct cacactcttc tcgaccttga gcaccttggc gcgcgcatcg
      241 accggtgggc cggattgcgg cccgagcttg ccgccgagac ggacgtcgag ctcggcgcct
      301 tcgccgacct cgaaggcgag ttttaccgcg ccgggatccc agatcatgcc gatggcggcg
      361 tccttcacct tgcggtcgag caatgccttc aggacgaagg tcgagtccga cgcagccccg
      421 ccgccggcat tgtccgacac gtcggccagc accatgggct tgggcaggtt gtgcgaggac
      481 acgcgcgcca tcgccgcctc gagcgagaca tagggcggct gggtggcctg gcgcatggcg
      541 aagaattccc ggccgagctc gcgcgccagg cgctcggcct tgggccgatc gccatcggtg
      601 atggcgatca gcttgctgcc catctccttg atgtcggacc acggaaagcc gtgggcgatc
      661 gagagcgaca gcaccccgtc cttgccttcc atcgccgaca gcttgtcgac gaagccgcgc
      721 atcggctggc gcgtggtgtg gaacacgccg atcatgcggc agtcccaggc cgccatcacg
      781 ggcctggtgc ggccctcgat ggcgccttcc atcacggtga acagatcgtc ggcgcgctcg
      841 ggcacgtcga catgcggata ttccttgaac agcaccagcg cggtcgcgtc acgcaaggtg
      901 ccctcgccga tgttgcaatg aagatcgagc tcggcgccca cggggatgtc cggtccgacg
      961 accttgcgca cagtggccaa aaggtcgctt tcgcagtcgt cgtagccctc ggcgaccatg
     1021 gcgccgtgca tcgacagcag cacgccgtcg accggcatcg ccgccttgag gtcggccaga
     1081 atctcgtcgc ggaaggcttc gtagaccttc ttcaccgtct tcccggcggg catggcgaaa
     1141 gcgcagaggc tttcgaccac ctgccagcct ttggcctcgg cgcggccgcg ccacaccgcg
     1201 agcggcgcgc cgaacatcgg cacgttcttg ccgtagctgg cgttacggaa gaggcaggtc
     1261 tcctcgaaaa gctgatggcc ggtggggatg gaggcgaagg tgttggtctc ggtgccgagg
     1321 caagcggtga agatcttttt cataggcggc gatcttggag acgcaaggcg ctgtcggcaa
     1381 gcgcgtcacg acggcggcat cgtcgcaatc acgtcggcca ccaggcgcgc cacgacatcc
     1441 aggtcgtctc gcggggtgaa agcgctgccg aagcgcgcca cgaccaggcg ctgcgagggc
     1501 acgacgatga catattgccc ggtcgcaccg cgggcgaaga aggcatcggc cggaatgccg
     1561 cgcgcgatgc ggtagcgctg gccttcaccg tcgccgcgat tggtccagaa gcccgcggcg
     1621 tagccatagc gctcgctgcc cggcgtcggc gcggccgaat agtcgaccca gcccggcggc
     1681 agcaggcgct cgcctccgac cacgccgtcg ttgaggtaga gcaggccgaa gcgcgcccag
     1741 tcgcgcgccg aggccagcat gtggctggag ccgatcggcg tgcccacggc atcgaactcg
     1801 agggtgacgt ggcgcatgcc gagcttgtcg aacagctcgc gccgggcgaa ggccagcacc
     1861 gaagcggcat cgccgcccgt cttgtcgcgg atgatcttgg atagcaacag ggtgttgccg
     1921 ttggtgtaat tccacgacgt gccgggcgct gccttgatcg acgcctgttc ggcgaaggcg
     1981 gccatgtcgc gcacgccgaa caccatgtag gccgagggat cgaaggcgga ggaggcacgg
     2041 gcggtgagcg agtcgccgat atcgaggccg ctgttcatgc gcagcaggtt gtcgatggag
     2101 atggcgtggc ggggatcgcg cagatcggac caggcggcga tcggcgccgg gccctcgagg
     2161 gagagtttgc cctgccgcac caggatgccg atcagggcgt tggtgacgga cttggtggcc
     2221 gaccagccga tcacctgcgt gtcgatgccg tagcccgggg catagcgctc ggcgatcacc
     2281 cggccattgt gcaccaccac gacggccttg gtgttgcgat gtggcgccgc cgccgtttct
     2341 gcgaagacgc gatcgagtgc ctgcttcaag gtgggctggc cgggttcgac gacctccggc
     2401 ccggcgatat cgggcagcag ggcgggcgcg ggcgtgtgcg gcggcaggga aaccgctgcg
     2461 ggcggctcgc catggagcac caggcaaccc aggggaccgc gatcgatggc gcgggcatgg
     2521 gcgaggccg
//
LOCUS       DASWGA010000643         3613 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1598453, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000643 DASWGA010000000
VERSION     DASWGA010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3613
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598453"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1412
                     /locus_tag="VF991_15040"
     CDS             <1..1412
                     /locus_tag="VF991_15040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557808.1"
                     /translation="GRELVGAPESAMQRVRGDRIAMIFQEPMTSLNPLHTIEKQVNEV
                     LRVHKGLSRPAARARTLELLRLVGLPEAERRLDAYPHQLSGGQRQRVMIAMALANEPD
                     LMIADEPTTALDVTIQAQILKLLKTLQARYGMALLFITHDLGIVAKMADRVAVMTQGR
                     IVEQGPVADVFDAPQHSYTQHLLSAEPKGRPAPSDPAAPEILRLDDVKVHFPIKRGVL
                     RRTVGYIKAVDGVSIALREGHTIGLVGESGSGKTTLGLALLRLERSEGGIRFDQHDLQ
                     KLSQREIRPLRRQMQIVFQDPYSSLSPRMSVGEIVGEGLDVHKIGSEAERTRMIDQAL
                     EEVGLEPAARERYPHEFSGGQRQRIAIARALVLKPRFIVLDEPTSALDMSVQAQIVDL
                     LRDLQIRHKLAYLFISHDLKVVRALADEVVVLRHGKVVERGSAKQVFEAPQTPYTQAL
                     IAAAFNLEAIGADRNVVAT"
     gene            1422..2357
                     /locus_tag="VF991_15045"
     CDS             1422..2357
                     /locus_tag="VF991_15045"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase A"
                     /protein_id="HEX9557809.1"
                     /translation="MPGAIAYISRDTDGVLWKKVLEAGLGPIDYRTLDSLGDTADIEV
                     ALAWKPDPGLLAIFANLKLIVSLGMGVDHLLADDKLPAGVPIVRIMDDGLVGQMSEYA
                     IYWALRHHRDIDKYQASQRAKLWKPEDFVDTIHRRIGVMGLGTIGQDTAKKFAALGFP
                     TAGWSRTAKSLSGIETFHGADGFGKFLARSDILVDILPLTRDTRGLLDAKAFARLPKG
                     AYFINMARGGHVVDEALLAALDSGHLSGAVLDVFNQEPLPAGHPYWTHPKVHVTPHIA
                     GATNPRTASPGVIENIKRLRSGRELIHRVDPKTGY"
     gene            complement(2472..>3613)
                     /locus_tag="VF991_15050"
     CDS             complement(2472..>3613)
                     /locus_tag="VF991_15050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HEX9557810.1"
                     /translation="RLPAGSWRLASDTAPVSATDAAVAIGLGTWRFERYRSKKGKPGA
                     KIVWPQDADKARATATIEAISLARDLITTPSSDMGPAELAAAAQALGKTHKAKVRVIV
                     GDDLLKQNYPMVHAVGRASSRAPRLIDLVWGRESDPKVTLVGKGVCFDTGGLDLKPSS
                     GMLNMKKDMGGAATMMAVASMVMAAKLPVRLRLLVPAVENSVSGNAFRPLDVVPTRKG
                     ITVEIGNTDAEGRLILCDALFEGASEKPTMMVDCATLTGAARVALGTDLPALFCNDDA
                     LADDLLAAGKDVTDPMWRLPLFVGYRRLLDSKVADINNAPGVAFGGAITAALYLKEFV
                     PDDVPWAHFDMMAWNNTSRPGRPEGGEAQAARAIFAAIEKRVAKT"
BASE COUNT          621 a         1243 c         1181 g          568 t
ORIGIN      
        1 agggccggga gctcgtgggc gccccggaga gcgcgatgca gcgggtgcgc ggcgatcgaa
       61 tcgccatgat cttccaggag ccgatgacgt cgctcaaccc gctgcacacc atcgagaagc
      121 aggtgaacga ggtgctgcgc gtgcacaagg gtctatcgcg gccggccgcc cgcgcgcgga
      181 cgctggagct gctgcggctg gtgggattgc cggaggccga gcggcgcctg gacgcctatc
      241 cgcatcagct ctcgggcggc cagcgccagc gggtgatgat cgccatggcg ctggccaacg
      301 agcccgacct gatgatcgcc gacgagccga cgacggcgct cgacgtcacc atccaggcgc
      361 agatcctgaa gctgctcaag accctgcagg cgcgctacgg catggcgctg ctgttcatca
      421 cccacgatct cggcattgtc gccaagatgg ccgaccgcgt cgccgtcatg acccagggcc
      481 gcatcgtcga gcagggaccg gtcgcagacg tgttcgacgc cccgcagcat tcctacaccc
      541 agcatctctt atcggcggag cccaagggcc ggccggcccc cagcgacccc gcggcgccgg
      601 agatcctgcg gctcgatgac gtaaaagttc acttccccat caagcgcggc gtgctgcgcc
      661 gtacggtcgg ctatataaaa gccgtcgacg gcgtcagcat cgccctgagg gagggccata
      721 cgatcggcct ggtcggcgaa tcgggatcgg gcaagaccac gctggggctc gccctgctgc
      781 gcctcgagcg aagcgaaggc ggtatccggt tcgaccagca cgacctgcag aagcttagcc
      841 agcgcgagat ccgtcccttg cgccgccaga tgcagatcgt cttccaggac ccctacagct
      901 cgctcagccc gcgcatgtcg gtcggcgaga tcgtcggcga aggtctcgac gtgcacaaga
      961 tcggcagcga agcagagcgc acccgcatga tcgatcaggc gctcgaggaa gtcggcctcg
     1021 agcccgccgc gcgcgaacgc tatccacacg aattctccgg cggccagcgc cagcgcattg
     1081 ccatcgcccg tgccctggtg ctgaaaccgc gtttcatcgt gctcgacgag ccgacctcgg
     1141 cgctcgacat gagcgtgcag gcgcagatcg tcgatctgct gcgcgacctg cagatccgcc
     1201 acaagcttgc ctatctgttc atcagccacg acctaaaagt ggtgcgcgca ctggccgacg
     1261 aagtggtcgt gctacgtcac ggcaaggtgg tggagcgcgg ttcggccaag caggtcttcg
     1321 aggcgccgca gacgccgtac acccaggcgc tgatcgcggc cgccttcaat ctcgaagcca
     1381 tcggcgccga ccgaaacgtc gtcgccacct gaggggattc aatgccgggg gctatcgcct
     1441 atatcagccg cgacaccgac ggcgtgctgt ggaagaaggt tttggaagca ggtctcggcc
     1501 cgatcgacta ccggactctc gacagcctgg gcgacaccgc cgatatcgaa gtggcattgg
     1561 cttggaaacc ggaccccggg ctgctggcca ttttcgcgaa cttgaagctg atcgtctcgc
     1621 tgggcatggg cgtcgaccat ctgctggccg acgacaagct gccggccggt gtgccgatcg
     1681 tgcgcatcat ggatgacggc cttgtcggcc agatgagcga atacgcgatt tattgggcgc
     1741 tgcggcacca ccgcgacatc gacaagtacc aagcaagcca gcgcgccaag ctgtggaagc
     1801 cggaagactt cgtcgacacc attcatcgcc gcatcggcgt gatggggctc ggcaccatcg
     1861 gccaggacac ggccaaaaag ttcgccgcgc tcggtttccc gacggcgggc tggagccgca
     1921 cggccaagag cctcagcggc atcgagacct tccacggcgc cgacggcttc ggcaagtttc
     1981 tagcgcgcag cgatatcctg gtcgacatcc tgccgctcac ccgcgacacg cgcggcctgc
     2041 tcgacgccaa ggcattcgcc cggctgccca aaggtgccta cttcatcaac atggcgcgcg
     2101 gcgggcacgt cgtcgacgag gcgctgctgg ccgcactcga ctccggccac ctaagcggcg
     2161 cggtgctcga cgtgttcaac caggagccgt tgccggccgg ccatccctac tggacgcatc
     2221 ccaaggtgca tgtgacgccg cacatcgccg gcgccaccaa cccgcgcacg gcctcgcccg
     2281 gcgtgatcga gaacatcaag cggctgcgca gcgggaggga gctgatccac cgcgtcgatc
     2341 cgaagacggg atattaaaaa gccgtcatcc cgaccggagc cgagcgcagc gaggcggagt
     2401 ggagggacct gttcatgtgt tcgacgaaga ggaggtccct ccactccgct tcgctccggt
     2461 cgggatgacg gctatgtctt tgcaacccgc ttttcgatcg cggcgaagat cgcgcgggcg
     2521 gcctgggcct cgccgccttc ggggcggccg ggccggctcg tgttgttcca ggccatcatg
     2581 tcgaaatgcg cccacggtac gtcgtcgggc acgaactctt ttagatagag cgcggccgtg
     2641 atggcgccgc cgaaggcgac gccgggcgcg ttgttgatgt cggccacctt gctgtcgagc
     2701 aggcggcggt agccgacgaa cagcggcaag cgccacatcg ggtcggtgac atccttgccg
     2761 gcggctaaaa gatcgtcggc cagcgcatca tcgttgcaga acaaggccgg caggtcggtg
     2821 cccagcgcca cgcgcgcggc acccgtcagg gtcgcgcaat cgaccatcat ggtgggcttc
     2881 tccgacgcgc cctcgaacag cgcatcgcac aggatcagcc gaccctcggc gtcggtgttg
     2941 ccgatctcga ccgtgatgcc cttgcgcgtc ggcaccacgt cgagcggccg gaaggcgttg
     3001 cccgacacgc tgttctcgac cgccggcacc aagaggcgca ggcgcaccgg cagcttggcc
     3061 gccatcacca tcgacgcgac ggccatcatg gtcgccgcac cgcccatgtc cttcttcatg
     3121 ttcagcatgc cgctcgacgg tttcaggtcg aggccgccag tgtcgaagca cacgcccttg
     3181 ccgaccagcg tgaccttggg atcgctctcg cggccccaca caagatcgat caggcgcggc
     3241 gcgcggctgc tggcccggcc gacggcgtga accatcggat agttctgctt caacagatcg
     3301 tcgcctacga tcacccgcac cttggccttg tgcgtcttgc ccagcgcctg cgcggcggcg
     3361 gccagctcgg ccggccccat gtcggacgac ggcgtggtga tgagatcgcg cgccagcgag
     3421 atcgcctcga tggtcgccgt ggcgcgcgcc ttgtcggcat cctgcggcca gacgatcttg
     3481 gcgccgggct tgcctttctt cgagcggtag cgttcgaagc gccaggtgcc gagtccgatc
     3541 gcaaccgcgg cgtccgtcgc cgacaccggc gcggtgtccg acgccagccg ccagctgccg
     3601 gccggcagcc ggg
//
LOCUS       DASWGA010000644         1555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_593173, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000644 DASWGA010000000
VERSION     DASWGA010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_593173"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            392..595
                     /locus_tag="VF991_15055"
     CDS             392..595
                     /locus_tag="VF991_15055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557811.1"
                     /translation="MTKVLLLAAALLLSGCVVAPYGGYGYGYGHGYGHGYGYGGYGGY
                     GYGHGYGDGDGGYGHGYGGGYGH"
     gene            complement(604..918)
                     /locus_tag="VF991_15060"
     CDS             complement(604..918)
                     /locus_tag="VF991_15060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557812.1"
                     /translation="MVGRAVLWLTLALGAIVAALSLGFAFYMLGTAALESLVSVALRT
                     GVFRAAWNHPESLIALLLFTAGALAILWAIIPRLARAIRRATRRKAGNEGKPAAEESP
                     AG"
     gene            complement(1041..>1555)
                     /locus_tag="VF991_15065"
     CDS             complement(1041..>1555)
                     /locus_tag="VF991_15065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9557813.1"
                     /translation="PSTAVFEPAACLPVLAALTYAVSALLARRLGSTDSSGTMALSAA
                     IFYAVASGLLALAVAPLGPLPDGHASLRFLLLPWTWPRGDDLGLMMLCGIIAALGSFL
                     LAQGYRLAEANTVAPFEYVALPWGVLWGWVFFDNLPDGATLAGGAVIVASGLYILHRE
                     RRKRVQRPHP"
BASE COUNT          277 a          514 c          550 g          214 t
ORIGIN      
        1 cgagctagcg gccagccgtc ccgacagact tgcgactatt ttcacgcccc ggaatccatg
       61 tcgggagggt agcggataca ataccccgaa agggaaagaa gcccgcttgc cgagcggcaa
      121 gttctaagcc tcccggcgcc aggacgatcc tggccaggct gtcgccatca cggccatcca
      181 agggagcgac gtcgtgccca agtcaacttc cccattgtca ccatcgagga tgcgatcgcc
      241 gccccggcgt cggcggcgca gtcctcgcgg gctgcattgc cgcgaccggc ccgaccggtc
      301 gctgaaccgg cggtgaacgg ccgcggcaga ggcggttcag agtctggatc ctacgctgga
      361 gctgcgatca cccggcgatg agggtcccat catgacgaag gtactgttgc tggccgcagc
      421 gttgctcctg tccggctgtg tcgtcgcacc ctatggggga tatggctacg gctatggcca
      481 tgggtacggt cacggctatg gctatggcgg ctatggcggc tatggctatg gccacggtta
      541 cggggacggg gacggcggtt acggccacgg ctatggcggc ggatacggcc actagcgttc
      601 gcgctagccg gccggcgact cctccgcggc aggcttgccc tcgttgcccg ccttgcgacg
      661 ggtggcgcgg cgaatggctc gcgccagccg ggggatgatg gcccacagga tggcgagggc
      721 gcccgccgtg aacagcagga gcgcgataag cgactccgga tgattccagg cggccctgaa
      781 cacgccggtc cgcagagcca ccgataccag cgactcaagg gcagccgtgc ccagcatgta
      841 gaaggcgaag ccgagcgaga gggcggcgac gattgcgcca agtgcgaggg tgagccagag
      901 aaccgcgcgt cccaccatct ctcagcctcc caatcgctgg ccggctacgc cgcagcctcg
      961 aacgccggat gcttggtccg tcacccgcag catagcagat cgtgccgtcg gctgctccga
     1021 cggggcacac gccatcacat ttatgggtgc ggccgctgga ctcgtttccg tcgctcgcgg
     1081 tggaggatat agagcccgct ggcgacgatc acggcgccgc cggccagcgt cgccccgtcc
     1141 ggcaaattgt cgaagaacac ccagccccac aacacgcccc agggcagcgc cacatactcg
     1201 aagggcgcca ccgtattggc ctcggccagg cgataaccct gggcgaggag gaacgatccg
     1261 agcgccgcga tgatgccgca cagcatcatg aggccgagat cgtcgccgcg cggccaggtc
     1321 cagggcagga gcaggaagcg caggctggca tggccgtcgg gcagcgggcc gagcggcgcc
     1381 acggccaaag cgagcagccc gctcgcgacg gcgtagaaga tcgccgcgga gagcgccatg
     1441 gtgccgctgc tgtcggtcga gccgagacgg cgggcgagca gcgccgagac ggcgtaggtg
     1501 agggcggcga ggaccggcag gcaggcggcc ggctcgaaga ctgccgtgct cggcc
//
LOCUS       DASWGA010000645         2782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1598768, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000645 DASWGA010000000
VERSION     DASWGA010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598768"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /gene="ilvC"
                     /locus_tag="VF991_15070"
     CDS             complement(<1..852)
                     /gene="ilvC"
                     /locus_tag="VF991_15070"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017482799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEX9557814.1"
                     /translation="MRVYYDRDADVNLIKGKKVLVVGYGSQGHAHAMNLRDSGVKDVR
                     IALKSGSATIKKAEGAGFTVMSPADGAKWADIVMVLTPDELQSDIYNADLAPNMRAGS
                     ALAFAHGLNVHFNLITPRADIDVFMIAPKGPGHTVRSEYLRGGGVPCLVAVAQNSSGN
                     ALEIGLSYSSAIGGGRAGTIETTFKEECETDLFGEQVVLCGGLVELIKAGYETLVEAG
                     YAPEMAYFECLHEVKLIVDLIYEGGIANMNYSVSNTAEFGEYVSGPRVVTSQTKDEMK
                     RILDDIQS"
     gene            940..1467
                     /locus_tag="VF991_15075"
     CDS             940..1467
                     /locus_tag="VF991_15075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557815.1"
                     /translation="MPAIRCPFVFLLALHAVVGCTNHPDSTAPTGPALPMPQIQAAID
                     NATPDTAQRGMSNKTWLWTLGGGPAQIHYSAADGRDFVWLVGERRIFAGQWRVAGDAN
                     ARGRTIVQICLRYPGAGVAGLSEGWSCRPAGKLFYDMTERESGDPLRIAGRTEAQFVL
                     DKTPARLAEVEARVR"
     gene            complement(1464..2090)
                     /locus_tag="VF991_15080"
     CDS             complement(1464..2090)
                     /locus_tag="VF991_15080"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HEX9557816.1"
                     /translation="MDYVVALLGLAVVHLLAVASPGPSTVLVIQTAAVAGRRGGLLAA
                     LAMMVGALLWAGAALFGLQALFARFDWLYLAFRIGGALYLLYLAMMLWRHARDPLPEI
                     PAGLASRTTGWRDFSRALLLQLGNPKIMVFFGSIFLSLLPQNLPAWMDATVLAVVAVN
                     EFTWFALLAVVFSGGAARAFYRRAKLWLDRLMGGVLGLLGLRLVLADG"
     gene            complement(2093..2590)
                     /gene="ilvN"
                     /locus_tag="VF991_15085"
     CDS             complement(2093..2590)
                     /gene="ilvN"
                     /locus_tag="VF991_15085"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEX9557817.1"
                     /translation="MASSHTISVLVDNEPGILARVVGLFSGRGYNIESLTVAQTDPKE
                     NLSRITIVTTGTPMVIEQIKAQLDRLVPVHRVRDLTVEGPHIERELALVKVKGSGEKR
                     VEALRLADVFRAKVIDAKTDSFVFEVTGTSDKVQTFVGLMEGLGLVDVGRTGIVAMSR
                     GSEAL"
BASE COUNT          501 a          933 c          913 g          435 t
ORIGIN      
        1 cgattggatg tcatcgagaa tgcgtttcat ctcgtccttg gtctgggacg tcaccactcg
       61 gggaccggag acgtactcgc cgaactcggc ggtgttggac accgaatagt tcatgttggc
      121 gatgccgccc tcgtagatca agtcgacgat cagcttgacc tcgtgcaggc actcgaaata
      181 ggccatctcc ggcgcgtagc ccgcctcgac cagggtttcg tagcccgcct tgatcagctc
      241 gacgaggccg ccgcacagca cgacctgctc gccgaacaga tcggtctcgc actcttcctt
      301 gaaggtggtc tcgatggtgc cggcgcggcc gccgccaatc gccgaggaat agctgagccc
      361 gatctcgagc gcgttgcccg acgaattctg cgccaccgcc accaggcagg gcacgccgcc
      421 gccgcgcaga tattccgaac gcacggtatg gccggggccc ttgggtgcga tcatgaacac
      481 gtcgatgtcg gcgcgcggtg tgatcaggtt gaagtgcacg ttcagtccgt gcgcgaaggc
      541 gagagccgag cccgcccgca tgttgggtgc gagatcggca ttgtagatgt cggactgcag
      601 ctcatcgggc gtcagcacca tgacgatgtc ggcccacttg gcgccgtccg ccggactcat
      661 caccgtgaag cccgcgccct cggccttctt gatcgtggcc gagccggatt tcagcgcaat
      721 gcgcacatcc ttcacgcccg aatcccggag gttcatcgcg tgggcgtggc cctggctgcc
      781 gtaacccacg accaggacct tcttgccctt gatcaggttc acatcggcat cgcgatcgta
      841 atagacacgc atggcggcca ttcctcctgg cagtgtgcgc ttcttgctca gaacggggct
      901 tactagacaa cccggccggc aaaggccagc ttcaattcca tgcccgcgat acgctgtccg
      961 ttcgtgtttt tgctcgccct ccacgccgtg gttggctgca ccaaccatcc cgattcgacg
     1021 gccccgaccg ggcccgcgct gccgatgccg cagatccagg ccgccatcga caacgccacg
     1081 cccgacacgg cgcaaagggg catgagcaac aagacatggt tgtggaccct gggcggcgga
     1141 ccggcgcaga tccattactc ggcggcagac ggaagggatt tcgtctggct ggtcggtgaa
     1201 aggcggatct ttgccggcca atggcgggtc gcgggagatg ccaacgcgcg cggccgaacg
     1261 atcgtccaga tctgcctgcg ctatcccggc gccggcgtgg cgggcctcag cgaaggctgg
     1321 agctgccggc cggcgggcaa gctgttctac gacatgaccg agcgcgagag cggcgatccg
     1381 ctgcgcatcg ccggtcgcac cgaagcgcag ttcgtgctgg ataagacccc ggcgcgcctc
     1441 gccgaagtgg aagcgcgcgt ccgctagccg tcggccaaga cgaggcgcag gccaagcagc
     1501 ccgagcacgc cgcccatgag gcgatcgagc cagagcttgg cgcgacgata gaaggcgcgc
     1561 gccgcgccgc cggagaacac cacggcgagc agcgcgaacc aggtgaattc gttcacggcc
     1621 acgacggcca gcaccgtggc gtccatccag gccggcaggt tctgcggcag cagcgacagg
     1681 aagatgctgc cgaagaacac catgatcttg ggattgccga gctgcagcag gagcgcgcgc
     1741 gaaaagtcgc gccagcccgt cgtgcgcgac gccaagccgg cgggaatctc cggcagcgga
     1801 tcgcgggcgt gacgccacag catcatcgcc agatagagga gatagagcgc gccgccgatg
     1861 cggaaggcga ggtaaagcca gtcgaagcgg gcgaacaggg cctgcaggcc gaacaacgcg
     1921 gcgccggccc ataggagcgc gcccaccatc atggccaacg ccgccaaaag cccgccgcgc
     1981 cgtccggcga ccgccgccgt ctggatcacc agcacggtcg acgggccggg gctcgcgacc
     2041 gccagcagat gaacgaccgc cagccccagc agggctacga cgtagtccac gatcagagcg
     2101 cctcgctgcc gcgcgacatg gcgacgatgc cggtgcggcc gacatcgacc aggcccagcc
     2161 cctccatcag gccgacgaag gtctgcacct tgtcggatgt gccggtgacc tcgaacacga
     2221 aggaatcggt cttggcgtcg atcaccttgg cgcgaaagac gtcggccagc cgcagcgcct
     2281 cgacccgctt ctcgccggag cccttgacct tgaccagcgc cagctcgcgc tcgatgtgcg
     2341 ggccctcgac ggtgaggtcg cgcacgcgat ggaccggcac cagccggtcg agctgcgcct
     2401 tgatctgctc gatgaccatc ggcgtgccgg tggtgacgat ggtgatgcgc gagaggttct
     2461 ccttcgggtc ggtctgggcg accgtcaggc tctcgatgtt gtagccgcgg ccggagaaca
     2521 gaccgaccac gcgcgccagg atgcccggtt cgttgtcgac cagcacggag atggtatggc
     2581 tggacgccac ccgatctgga gccaattgcg gtgcgttcac accagcacca tgccttcatc
     2641 cgacatcggc ttctgggcgc ggtcgtcagg gcccagcagc atgtcgtagt gcgccgggcc
     2701 cgaggggatc atggggaagc agttctcggt cttgtcgacc agcacgtcga cgacgaccgg
     2761 cctgttgacc tcgatcatct gc
//
LOCUS       DASWGA010000646         5122 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1462043, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000646 DASWGA010000000
VERSION     DASWGA010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5122
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1462043"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VF991_15090"
     CDS             complement(<1..726)
                     /locus_tag="VF991_15090"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9557818.1"
                     /translation="MRLKHPDMRPAGLPVPIRFDGRELLALPGETIAAALAAAEIVAV
                     RRARSGAPRGPFCGMGVCFDCLVTVNDKPSQRACLTRVEAGMDIRSSPVATAAVSQPA
                     TPAPEIACDVLVVGAGPAGLTAARALALAGADVVVLDERLHTGGQYFKPLAPSQQAKA
                     AVLDRQFRDGAVLRQSTLTAGATIVNEATVWAAFSPQEVAAIVAGRARLYRPKRLVLA
                     TGAYEQALPVPGWTLPGVMTVGGL"
     gene            750..1664
                     /locus_tag="VF991_15095"
     CDS             750..1664
                     /locus_tag="VF991_15095"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015342080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX9557819.1"
                     /translation="MSSKKFRGIYTVLITPFTADGKKVDEAALRRLVDFQIEEGIHGL
                     IPLGSTGEFLSVTPDERRQIVEIVIKQAAGRVPVLIGTGAEWTDEVVRSSREAESMGA
                     DGVMIIPPFYSVPTDDELYAHYKKVSDAISIPIMVYNNPATANVDMMPELIARLAQIP
                     NCRYVKESTLDPTRVRDIIRLAGERMRVFAGVLGYESFWLGAEGWVAVCSNVIPRWSA
                     ELFELVADKRDMDAALALYNKMTPLLWWVGGPRYVSGTKACFEMMGMPMGPPRAPRLP
                     LPEAQRPALGEVLRQMGLLAQEKARARA"
     gene            complement(1936..3123)
                     /locus_tag="VF991_15100"
     CDS             complement(1936..3123)
                     /locus_tag="VF991_15100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557820.1"
                     /translation="MKLLRRTLIALAGLPLTGGAGHAGPFDGVWARPVWTEWELSAAT
                     RRGPDTAGGLLLYFHGRGPGQVTGRPIPGIFIEMAKIASWDILRINRASSVDDETGDD
                     QILEVVAHQITEARQAGYERIIAGGGSGGGWLALLAATLPGVDAAIGLAPGTGSYETR
                     ELARTRDLLAQKLAGARAKRVAAFFFEGDWGVSEGRAAVIRQGLQNSGSTFMVVDRPA
                     DLPGHAAMGSGRLVRRYRDCLLQFIQNADQPAGEVQCSRPSGYAVGSEIGFPADLPVL
                     QPPADPAFAPYLGRWEGDDELGAYLIMQSIAVGPTQVIFRTGYSAAFNQPPRTWVGDV
                     AFELDEANRRIVCKLPDGLDDYRVALKSATELEFQALLRNVRGASTLSFSLRKQDSPP
                     AAR"
     gene            complement(3877..>5122)
                     /locus_tag="VF991_15105"
     CDS             complement(3877..>5122)
                     /locus_tag="VF991_15105"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9557821.1"
                     /translation="TALSGPAAGVVGARDVAAACGIKDIITVDIGGTSADICLVKNGE
                     IALTQRGHVGDWPLPLPMVDMVTIGAGGGSIARVADATLTVGPQSAGADPGPAAYGRG
                     GQQATVTDAHVVLGHLPAALLGGRMTLDAMAARRAIERRVAQPLGLSPEAAARGVLAI
                     IDNNMMGALRIVSVERGHDPRDFTLVPFGGAGPLHGCALAGLLGITRIVVPAAPGVLC
                     ADGLLAADLKAEFSQTLPKAGAIDLEMARTIYTDLERQTEQWLEAENVAPGDRQRSRI
                     ALLRYHGQGGELAVGWADTKAGVEAAFAAAHKSLYGFTLEAPVELITLRVEARGRMPQ
                     PPRPLLAAGSGAKSHGVTKVHFASGTTEVPLFDRASFGAGDRLAGPAIISQLDATTLV
                     LPGWTADVHPSGAMLLTATAVH"
BASE COUNT          891 a         1680 c         1739 g          812 t
ORIGIN      
        1 caggccgccc acggtcatga cgccaggcag ggtccagccg ggcacgggca aggcctgctc
       61 ataggcgccg gtcgccagca ccagccgctt cggccggtag agcctggctc ggccggcgac
      121 gatggcggcg acctcctgcg gggagaacgc cgcccagacg gtggcctcgt tcacgatcgt
      181 ggcgccggcc gttagcgtcg attggcgcag cacggcgcca tcgcggaact ggcggtccag
      241 gacggcagcc ttggcctgct gcgagggggc gagcggcttg aaatactggc cgccggtatg
      301 cagccgctca tcgagcacga cgacgtcggc tccggccagg gcgagagccc gcgccgcggt
      361 caggcccgcg ggccccgcgc cgaccacgag cacgtcgcag gcgatctccg gcgcgggcgt
      421 agcgggttgg ctcaccgctg ccgtggcgac cggcgaggag cggatatcca tgcccgcttc
      481 gaccctggtc aggcaggcgc gctggcttgg cttgtcgttc accgtcacca ggcaatcgaa
      541 gcagacgccc atgccgcaga acggcccacg cggcgcgccc gaccgtgccc gacggacggc
      601 gacgatttcg gccgccgcca gggcggccgc gatggtctcg ccgggcaggg ccaaaagctc
      661 gcgtccatcg aagcggatgg ggaccggcag gccggcgggc cgcatatcgg ggtgcttcag
      721 gcgcatggca aaaggtctac aatgaaacca tgagcagcaa gaagtttcgc ggcatctaca
      781 ctgtcctgat cacgcccttc accgccgacg gcaagaaggt cgacgaagcc gcgctccggc
      841 gtctggtcga cttccagatc gaggaaggca tccatgggct gatcccgctc ggcagcaccg
      901 gcgagttcct gagcgtgacg cccgacgagc gccgccagat cgtcgaaatc gtgatcaagc
      961 aggcggccgg ccgcgtgccg gtgctgatcg gcacgggcgc cgaatggacc gacgaggtgg
     1021 tgcgcagcag ccgcgaggcc gagtcgatgg gcgccgacgg cgtgatgatc atcccgccct
     1081 tctacagcgt gccgaccgac gacgagctct atgcccacta caagaaggtg tcggacgcga
     1141 tctcgatccc gatcatggtc tacaacaacc cggcgacggc caatgtcgac atgatgccgg
     1201 aactgatcgc ccgcctcgcc cagatcccca actgccggta cgtcaaggaa tcgacgctcg
     1261 atccgacgcg cgtgcgcgac atcatccggc tggccggcga gcgcatgagg gtgttcgcgg
     1321 gcgtgctggg ctacgaatcc ttctggttgg gcgccgaagg ctgggtcgcg gtgtgctcca
     1381 acgtgatccc gcgctggtcg gccgagctgt tcgagctggt ggctgacaag cgcgacatgg
     1441 atgcagccct cgccctctac aacaagatga cgccgctctt gtggtgggtc ggcgggccgc
     1501 gttacgtctc gggcaccaag gcgtgctttg agatgatggg catgccgatg ggcccgccgc
     1561 gcgccccgcg cctgccgctg cccgaggcgc agcgtccggc gctcggcgaa gtgttgcggc
     1621 agatggggct gctcgcgcaa gaaaaggctc gcgcccgggc ttgaaaggcc gatcccgggg
     1681 aatttccgca ttttccgcat tttccgctaa cgattttgag gggggcagcg actggacgac
     1741 gcaagataat tatcggtatt tccggcattt ccgccggtcg ttttgctctg gagtgcaccc
     1801 tttgagtgag acagcaaaac cccggacagg tggttgatca ttggcgatca aggccggcac
     1861 tcttcgtgac aagctcttcg taaaagatac tgacgcgatc gcatagatga atgtggcttt
     1921 ccacggacac cggtctcagc gagctgcggg cgggctgtct tgtttgcgca acgagaaact
     1981 cagcgtgctg gcgcccctga cgtttcggag caaggcctgg aattcgagct cggtcgcgga
     2041 tttgagcgcc accctgtagt cgtccaggcc gtcgggaagc ttgcagacga tacgtcgatt
     2101 ggcctcgtcg agttcaaagg caacgtcgcc cacccaggtc cttggcggct gattgaaagc
     2161 cgccgaatag ccggttcgga aaatgacctg ggtcggtcca accgcgatgg attgcatgat
     2221 caggtaggcg ccgagttcgt cgtcgccctc ccagcggccc aaataggggg cgaacgccgg
     2281 gtccgccggc ggttgcagga caggcaggtc cgcgggaaag ccgatctccg agccgaccgc
     2341 atagccgctc gggcgggagc attggacctc gccagccggt tgatcggcgt tctggataaa
     2401 ctgcaggaga caatcccgat accttcggac aagccgcccg ctgcccatcg cagcatgacc
     2461 cggcaagtcc gccgggcggt cgacgaccat gaacgtcgat ccgctgttct gcaggccctg
     2521 ccgtatgaca gccgcccggc cttcgctcac gccccaatct ccctcgaaaa agaacgccgc
     2581 aacgcgcttc gcccgggcgc cggcgagttt ctgcgccagc aggtcgcgcg ttcgtgccag
     2641 ctcccgtgtt tcgtagctgc ccgttccggg cgccaggccg atcgccgcat cgacacccgg
     2701 cagcgtcgcc gccaacagtg cgagccagcc gccgcccgag ccgccgccgg caatgatccg
     2761 ttcgtacccc gcctggcgcg cctcggtgat ctgatgcgcc acgacttcaa ggatttggtc
     2821 gtcgcccgtt tcatcgtcga cagaggacgc ccggttgatc ctcaagatgt cccaactcgc
     2881 gatcttggcc atctcgatga agatgcccgg gatcggccgc ccggttactt gccccggacc
     2941 tcttccatga aagtacagga ggagcccgcc ggccgtatcc gggccacgcc tggtcgcggc
     3001 cgacaattcc cattcagtcc aaaccggcct ggcccaaacc ccgtcgaagg gcccagcgtg
     3061 gccggcgcca ccggtcaacg gcaagccggc cagagcgatc aatgttctgc gcaggagttt
     3121 catgccaatc ggcctcaacc gcgaaccaac gcatcgagga tactgttgca tgaagcatca
     3181 gggggcacaa tcaatttgca ctgttccaac tacggtttgc aacctatacg tgtatttaca
     3241 actaggatgt cggcttgggc tttggcagaa gcggaagaat cgggccgggg ttgtaaggcc
     3301 aggtcggcca acggaacggc ggcggcgccg gcggaagccg acgcattgga ttgtcgtcgt
     3361 caggccaggc gggcggccaa cgaaacaggg gccaggtagg gagtggaagt ggggttggtg
     3421 ccactcctga ccccggatcg ggccttggca ccgtctccag tctcgggcgc gcgggccatg
     3481 gccgggactg aagaaagtcc ggtggactgg tccccatgcc acgcggatcg acggaggcaa
     3541 gcgtcgcatc gccgtaggga aaataattgt cggccggggc gtcggagacg ccgggtaagg
     3601 ccggacgtac cgaaccatct gggtcgacac tgaagccggg gtcttcttcc tccacgccga
     3661 cacgaaatcc gggtacgcga gtgggaggtc ggaaattgaa catggctcga ttctccaatg
     3721 cggctctcgg ctgcggagaa ggtataggcc attcctaagt gtcagtcaat agcaaaactt
     3781 ggaacttaag tacgttgatt cgaaagtcaa gacggaatta agcacgtacc tcgacggtgg
     3841 ggtaacggct ctccgctggg cacgccccag caatgatcaa tgcacggcgg ttgccgtcag
     3901 aagcatcgct ccggaggggt gcacgtcggc cgtccagccc ggcaggacca gggtcgtcgc
     3961 gtcgagctgg gagatgatcg ccggaccggc gaggcgatcg ccggcgccga acgacgcgcg
     4021 atcgaacagc ggcacctcgg tcgtgcccga cgcgaaatgc accttggtca cgccatggga
     4081 tttcgcgccc gaaccggcgg ccagaagcgg acgcggcggc tggggcatgc ggcctctggc
     4141 ctcgacgcgc agcgttataa gctcgaccgg cgcctccagc gtgaagccgt agaggctttt
     4201 atgcgccgcg gcgaaggcgg cttcgacccc ggccttggta tcggcccagc cgacggcgag
     4261 ctcgccgcct tgaccgtgat agcgcagcag ggcgatgcgc gagcgctggc gatcgccggg
     4321 cgcgacgttc tcggcttcca gccattgctc ggtctgccgt tccaggtccg tatagatcgt
     4381 acgcgccatt tcgaggtcga tcgccccggc cttgggcagg gtctggctga attccgcctt
     4441 caggtcggcc gccagcaggc cgtcggcgca cagcacgccg ggcgccgccg ggacgacgat
     4501 ccgcgtgatg cccaaaagcc cggcgagcgc gcagccgtgc agcggtccgg cgccgccgaa
     4561 cggcaccagg gtgaaatcgc gcggatcatg gccgcgctcc accgagacga tgcgcagcgc
     4621 gcccatcatg ttgttgtcga tgatggcgag cacgccgcgt gccgcggctt ccggcgacag
     4681 gccgagcggc tgggcgaccc ggcgctcgat cgcccggcgc gcggccatcg catcgagcgt
     4741 catgcggccg cctaaaagcg ccgccggcag gtggcccagg acgacatggg cgtcggtgac
     4801 ggtggcctgc tgcccgccgc ggccgtaggc ggcggggccg gggtcggcgc cggcgctttg
     4861 cgggccgacc gtcagcgtgg cgtcggcaac cctggcgatc gagccgccgc ccgcgccgat
     4921 ggtcaccatg tcgaccatcg gcagaggcag cggccagtcg ccgacatggc cgcgctgggt
     4981 gagcgcaatc tcgccgttct tgaccaggca gatgtcggca ctggtgccgc cgatatcgac
     5041 ggtgatgatg tccttgatgc cgcacgccgc cgcgacgtcg cgcgcgccta cgacgccggc
     5101 ggccggcccc gacaaggccg tc
//
LOCUS       DASWGA010000647         3529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_709143, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000647 DASWGA010000000
VERSION     DASWGA010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709143"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..1281
                     /locus_tag="VF991_15110"
     CDS             154..1281
                     /locus_tag="VF991_15110"
                     /inference="COORDINATES: protein motif:HMM:TIGR00056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557822.1"
                     /translation="MADAEPTIRYTVSAGKPVVEVGGTWTVFSLRGIRHKAEKALQAA
                     GTAKAARLVDASAVERLDTAGALEILALAGGGADSEIKTADKAHADLFEVVKKNMCEA
                     PPERHVDWLAHWLEEVGRNTVNLYHQGVNLAAFFGEILVVFVEACLEPRRFRINAVVR
                     QMYEVWIRALVIVGVLCFLIGVVIAYQGVQQLKQFGAETFTVEAVGIGMFRELGVLLT
                     AIIVAGRSGSAFTAQIGTMQVNQEVDAMRTIGLNPVEWLVMPRIAALVISMPLLAFWG
                     DMTGLLGGAVACTFYLDFTFVQFFERLRDTVGPWNFYTGIIKAPVFGAVIATIGCFEG
                     LQVHGSAESVGQLTTRSVVESIFSVIVLDAIFSVIFLLANV"
     gene            1281..2096
                     /locus_tag="VF991_15115"
     CDS             1281..2096
                     /locus_tag="VF991_15115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557823.1"
                     /translation="MAKDQGKAEGGQLVDHSDGREIVLRLRSVRTQFGDNVIHDNLDF
                     DVFRGEIVGLVGGSGSGKSVLLRTIIGLNEASQGTIEVLGIDTRTVHGQAERHLQSRT
                     GVQFQDGALFSSLSVTENIIVPIREHAGLEEKTMREIAALKVALVGLPSDTGDKRPAE
                     LSGGMRKRASLARALALDPEMLFLDEPTAGLDPIAAAHYDELVKGLSGNLGLTVLMVT
                     HDLDSLYAVCDRIAVLLDKRVVVGTMQEMLAFDHPWVREYFHGPRGRAAARQE"
     gene            2108..3142
                     /locus_tag="VF991_15120"
     CDS             2108..3142
                     /locus_tag="VF991_15120"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX9557824.1"
                     /translation="MERKSPYVLIGAAMIIFIAAVAGFVIWKLRAGDRTAYAYYDILF
                     SGDVQGLTNDSPVFYRGLRVGRVHSIQLTSRVDTQRSTGRERLTEKIEVTVAVDWHID
                     IRERSYAVFEKPFIAGAPFIQIVGRLDVDQVKPKKKLGEKPYPEIREGASFLQATSTS
                     AQELLTKASVTVDRLNELLSPDNIGALSDSLRNISTVTTGLAKQDAAIQATLAELPTA
                     VAEFRKTFDKLNGLSDSLNLIALEVGPQDDATRKALAGKTPGELRKALTDARLAFANI
                     DAAANQLKGLVAENKGPIRAFSETGLNELSLTIRELRQLTANLNVIATRLERDPAGFV
                     FSGKQGYTPK"
     gene            3139..>3529
                     /locus_tag="VF991_15125"
     CDS             3139..>3529
                     /locus_tag="VF991_15125"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type transport auxiliary lipoprotein family
                     protein"
                     /protein_id="HEX9557825.1"
                     /translation="MIVRLAVCAAAAASLAGCALLQAADPQDLYTVTPKSTFEPDLPA
                     VYWQLTVEAPAAAANLNTGRIAIAMTPTSSDYYAKAAWTDRAPLMVQTRIVDSFENTR
                     KIVAVARESIGIRANYVLQPDLRNFEAL"
BASE COUNT          619 a         1178 c         1135 g          597 t
ORIGIN      
        1 ttcgtcgatc ggaccgtcga tcatctcgat cttgtccaga atcggccatt tgcccattgg
       61 ttcctccgct gccggatcgt gacagtgcgc gagggaagga gcaacgcgta gacgattgac
      121 agcgcgaacg ggcgcgatga ctaatctcct cgaatggccg acgccgaacc aacaatccgc
      181 tacacggtga gcgccgggaa gccggtcgtg gaggtcggcg gcacctggac cgtgttcagc
      241 ctgcgcggca tccgccacaa ggcggagaag gcgctgcagg cggccggcac cgccaaggcc
      301 gcgcgcctcg tcgatgccag cgccgtcgag cggctcgaca cggcgggagc gctggaaatc
      361 ctcgcgctcg ccggcggcgg cgcggactcc gagatcaaga ccgccgacaa ggcccatgcc
      421 gacctgttcg aggtcgtgaa gaagaacatg tgcgaggcgc cgcccgagcg gcacgtcgac
      481 tggctcgccc actggctcga ggaggtcggg cgcaacacgg tcaacctcta ccatcaaggc
      541 gtcaacctcg cggccttctt tggcgagatc ctggtggtct tcgtcgaggc ctgcctggag
      601 ccgcgccgct tccgcatcaa tgccgtggtg cgccagatgt acgaggtctg gatccgggcg
      661 ctggtgatcg tgggcgtgct ctgcttcctg atcggcgtcg tcatcgccta ccagggcgtg
      721 cagcagctaa agcagttcgg cgccgagacc ttcacggtgg aggccgtcgg catcggcatg
      781 ttccgcgagc tgggcgtcct gttgaccgcc atcatcgtgg cgggccgctc gggcagcgcc
      841 ttcacggccc agatcggcac catgcaggtc aaccaggaag tcgacgccat gcgcacgatc
      901 gggctcaatc cggtcgaatg gctggtcatg ccgcgcattg ccgcgctggt gatctcgatg
      961 ccgctgctcg ccttctgggg tgacatgacc gggctgttgg gcggcgccgt cgcctgcaca
     1021 ttctatctgg atttcacctt cgtgcagttc ttcgagcggc tgcgcgatac ggtgggtccc
     1081 tggaatttct acaccggcat catcaaggcg ccggtgttcg gcgcggtgat cgccacgatc
     1141 ggctgcttcg agggcctgca ggtccatggc agcgccgaga gcgtcggcca gctcaccacc
     1201 cgctcggtcg tggagtcgat cttcagcgtc atcgtgctcg acgcgatatt ctcggtcatc
     1261 ttcctgctgg cgaacgtctg atggcgaaag accaagggaa ggccgaaggc gggcagctcg
     1321 ttgaccacag cgacggacgc gagatcgtgc tccggctgcg cagcgtgcgc acccagttcg
     1381 gcgacaacgt catccacgac aatctcgatt tcgacgtatt tcgcggcgag atcgtcggac
     1441 tggtgggcgg ctcgggctcc ggcaagtcgg tgctgctgcg caccatcatc ggcctcaacg
     1501 aggcgagcca ggggaccatt gaggtcttgg gaatcgacac tcgcacggtg cacggccagg
     1561 ccgagcgcca cctgcagtcg aggacgggcg tgcaattcca ggacggcgcg ctgttctcct
     1621 cgctctcggt gaccgagaac atcatcgtac ccatccgcga gcacgccggc ctggaagaga
     1681 agaccatgcg cgagatcgcc gctctcaagg tggctctggt cggcctgcca tcggacaccg
     1741 gcgacaaacg gcccgccgag ctttcgggcg gcatgcgcaa gcgcgccagc ctggcccgcg
     1801 ccctggcgct cgaccccgaa atgctgttcc tggacgagcc gaccgccggc ctcgatccga
     1861 tcgccgcggc gcactacgac gagctcgtca aggggttgag cggcaacctc gggctgaccg
     1921 ttctcatggt gacgcacgat ttggacagcc tctatgctgt gtgtgaccgc atcgccgtgc
     1981 ttctcgacaa gcgcgtcgtg gtgggtacga tgcaggagat gctggcgttc gatcatccct
     2041 gggtgcgcga atactttcac ggtccgcgcg gccgggcggc ggctcgacag gagtagaaaa
     2101 ggcatccatg gaaagaaagt cgccctatgt gctgatcggc gcggcgatga tcatattcat
     2161 cgcggccgtc gccggattcg tgatctggaa gctgcgcgcg ggcgatcgga ccgcctatgc
     2221 ctactacgac atcctgttct cgggcgacgt ccagggcctg accaacgatt ctccggtgtt
     2281 ctaccgagga ttgcgggtcg gccgcgtcca cagcatccag ctcacctcgc gcgtcgatac
     2341 ccagcgctcg accggccgcg agcgcctgac cgagaagatc gaggtcacgg tggcggtcga
     2401 ctggcacatc gatatccgcg agcgctcgta cgcggtgttc gaaaaaccgt tcatcgccgg
     2461 cgcgcccttc atccagatcg tcggccgcct ggacgtcgac caggtgaagc ccaagaagaa
     2521 gctgggcgag aagccctatc ccgaaatccg cgagggcgcg tccttcctgc aggccacctc
     2581 gacctcggcg caggaactgt tgaccaaggc cagcgtgacg gtcgaccggc tgaacgagct
     2641 cctgagcccc gacaatatcg gcgcgttgag cgattcgctg cgcaatatct cgacggtgac
     2701 cacggggctc gccaagcagg acgccgccat ccaggcgacg cttgccgagc tgcccaccgc
     2761 cgttgccgaa ttccgcaaga cattcgacaa gctgaacggg ctgtccgatt cgctcaacct
     2821 gatcgcgctc gaggtcggac cgcaggacga tgcgacgcgc aaggcgctgg ccggcaagac
     2881 tcccggcgag ctgcgcaaag ccctcaccga tgcgcgcctg gcgttcgcca atattgatgc
     2941 cgcggccaac cagctcaagg gactggtggc cgagaacaag ggcccgatcc gggcattctc
     3001 cgagaccggc ctcaatgaac tgtcgctcac catccgcgag ctgcgccagc tcacggccaa
     3061 cctcaatgtg atcgccaccc gcctcgagcg tgatccggcc ggcttcgtgt tcagcggcaa
     3121 acagggatac acgccgaaat gatcgtccgc ctggccgtct gcgcggcagc cgccgcttcg
     3181 cttgccggtt gcgcgctgct tcaggcggcc gatccgcagg atctctacac ggtgacgccc
     3241 aagagcacat tcgaacccga cctgccggcg gtctactggc agctcacggt cgaggcaccg
     3301 gccgcggcgg ccaatctcaa caccggccgc atcgccatcg ccatgacgcc gacctcgtcg
     3361 gactactacg ccaaggcggc gtggaccgac cgcgcgccct tgatggtgca gacccggatc
     3421 gtcgattcct tcgagaacac ccgcaagatc gtggcggtgg cacgcgaatc gatcggcatc
     3481 cgggccaact acgtgctgca gcccgacctg cgcaacttcg aggcgctct
//
LOCUS       DASWGA010000648         8337 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2350981, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000648 DASWGA010000000
VERSION     DASWGA010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8337
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2350981"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..373)
                     /locus_tag="VF991_15130"
     CDS             complement(<1..373)
                     /locus_tag="VF991_15130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557826.1"
                     /translation="MKLQYGWVVVGAGALMGCVAIGAVFSLAVFLQPMSDATGWSRTG
                     VSSAMTIVFLTMGVAAFGWGALTDRFGPRIVVLLGALLLGLGLALASRATSLLEFQVV
                     YGVIVGGAAGAVFAPLMATVTG"
     gene            644..1021
                     /locus_tag="VF991_15135"
     CDS             644..1021
                     /locus_tag="VF991_15135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557827.1"
                     /translation="MPKKKPESATSSRQCQMALSRWDNEGGAGPAGPQGGSVSADAPS
                     KIPELTNAELVQLRIRVIALENLVIALLAEASERQLGLAREMAAYISPRPGFTHHPLT
                     IHAAAQMIDLVERAGHFKSGTPS"
     gene            1363..2814
                     /gene="hydA"
                     /locus_tag="VF991_15140"
     CDS             1363..2814
                     /gene="hydA"
                     /locus_tag="VF991_15140"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004157 - dihydropyrimidinase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HEX9557828.1"
                     /translation="MAMLIRGGTVVTADQSYRADVLCDQGLIKEIAPRIDAPAGARVV
                     DAGGQLVMPGGIDPHTHMELPFMGTTASEDFFTGTSAGFAGGTTMIIDFVIPNPKEPL
                     LAAYNKWRGWAEKSAGDYSFHVAVTWWDDSVHRDMGTLTKEHGVNSFKHFMAYKGAIM
                     AEDEVLVNSFTRARELGAICTVHAENGELVFHLQQQLLKAGITGPEGHPLSRPPEVEG
                     EAANRAIRIAQVLGVPLYIVHNSCRESLEAITRARNEGQRVFGEVLAGHLVVDDSVYR
                     NPDWNVAAAHVMSPPFRPKEHQEVLWRGLQSGNLQTTATDHCCFCAPQKEMGRADFTK
                     IPNGTGGVEDRMSILWHYGVATGRLTPNEFVRVTSTNAAQIFNIYPRKGSISVGADAD
                     IVVWDANAKRTISAKTHHQKVDYNIFEGLTVQGLATHTISQGNVVWADGQLDAKRGAG
                     RYIPRPTFAPFFDAVRRQSDLKAPRAVPRMAAE"
     gene            complement(2934..3935)
                     /locus_tag="VF991_15145"
     CDS             complement(2934..3935)
                     /locus_tag="VF991_15145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557829.1"
                     /translation="MKRLPILAGTAVLALSSLSAQAADKLTLQLKWVTQAQFAGYFVA
                     KDKGFYKDENLDVTIKAGGPDVAPPQVIAGGGADVVIDWMPSALATREKGVALVNIAQ
                     VFKRSGMELTCRADSGVKTPADFKGKTLGVWFGGNEYPFLSWMDKLKLKTSGADADIK
                     VLKQGFNVDPLLQKQAACISTMTYNEYWQIIDAGVKPADLVVFKYEDQGVATLEDGLY
                     TLDAKLKDPAAVDKLARFVRASMKGWDYAIKNQPEAVKIVLKNDTTGAQTEKHQTRMM
                     GEIAKLVADQPKGLGYLEEADYQRTVDVLLKGSSDPVITKKPVGAWTHDVWDKAMKK"
     gene            complement(3966..5090)
                     /locus_tag="VF991_15150"
     CDS             complement(3966..5090)
                     /locus_tag="VF991_15150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012652100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557830.1"
                     /translation="MKLNGAALLAALLALASIVLPVGIGNGAPVHWHDLGMPLVAVGL
                     CLLAALATLRRRASNPITGIVALGGAVIGASAPLAALDGGLSVGPEAPGFWLLVAGVA
                     ALAWRGLESLADLRTPRWIGALVVPGLFGVLLLWLWQVLTVGFDVPSVLLPSPARIGH
                     QLAANAGLLWQDFRQTFLKSVLAGFALGSGAGFVVAVLVDRSPFLQRGLLPLGALVSA
                     IPIVGIAPIMVMWFGFDWQSKAAVIVVMTFFPMLVNTLAGLAAADNIERDLMHSYAAG
                     YGQTLRKLRLPNALPFIFNALKINSTLALIGGIVAEFFGTPVVGLGFRISVEIGRMNV
                     DMVWATIAVAAVAGSMFYGALALIERGLTFWHPSYRQGQS"
     gene            complement(5087..6007)
                     /locus_tag="VF991_15155"
     CDS             complement(5087..6007)
                     /locus_tag="VF991_15155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557831.1"
                     /translation="MSDVALRPALPATLQRLRKGSTLPLAAVVTAIIVLWYLGAIWLN
                     AGLVEQRLEQTSDPAATSTFVKTAWSLDRPVLPAPHQVALEFYDSVFTRDVTSPRSLV
                     YHAYVTGSAAIVGFLFGTALGILLSLGIVSWRTLDRSLLPWIIASQTIPILAIAPMII
                     VVLGNMGLTGLMPKAVISMYLCFFPVTIGMVKGLRSPDPLQLDLMRTYSATPRQVFWK
                     LRWPASVGFLFASLKVAIAISLVGAIVGELPTGAQEGLGARLLSGSYYGQTVQIWSAL
                     FMAALLGAVMVAAVGAVELTTLRRMGAAAP"
     gene            complement(6000..6800)
                     /locus_tag="VF991_15160"
     CDS             complement(6000..6800)
                     /locus_tag="VF991_15160"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557832.1"
                     /translation="MKESPAPSAPLAIDLRDLSLTFETAEAPVVALAKINLQIKAGEF
                     VSLIGPSGCGKTTLLRVMADLARPTGGDIKVNGLSPREARLARAYGYVFQAPALYAWR
                     TVRRNLMLPLEIMGVAKPEREARARQYLAMVGLEEFANKFPWQLSGGMQQRVSIARAL
                     SFEPKLLLMDEPFGALDEITRDHLNEQLLRLWEQTQKTVVFVTHSIPEAVFLSNRIIV
                     MSPRPGRILEVIENHLPANRTLDMRETPAFLDIALKVRRALRAGHSYE"
     gene            complement(6797..8074)
                     /gene="preA"
                     /locus_tag="VF991_15165"
     CDS             complement(6797..8074)
                     /gene="preA"
                     /locus_tag="VF991_15165"
                     /EC_number="1.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017113 - dihydropyrimidine dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0006210 - thymine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006212 - uracil catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HEX9557833.1"
                     /translation="MAELRTTFAGIKSPNPFWLASAPPTDKAYNVVRAFKAGWGGVVW
                     KTLGEDGPPIVNTASRYGALEVGGMRMVGFTNIELITDRPLQVNLDEIKQVKRDWPDR
                     ALVVSLMVPCVEDSWKTILKKVEETNADGVELNFGCPHGMSERGMGAAVGQVPDYVEM
                     VTRWCKQHTRMPVLVKLTPNVTSILGPARAAKRGGADGVSLINTVNSIIGVDLERMAP
                     QPVVAGKGTHGGYCGPAVKPIALNMVAEISRDPECAGLPISGIGGIATWQDAAEFHAL
                     GATTVQVCTAAMHYGFKIIDDMVDGLSNWLDAKGHAGVTGILGRAVPNVTDWQHLDLN
                     YKTVALIDQEACIKCGLCHIACEDTSHQAIAAKKAGSERRYEVIDAECVGCNLCMYAC
                     PVTDCISMVEVATGKGPLTWLEHPNNPLRQTAK"
     gene            complement(8089..>8337)
                     /locus_tag="VF991_15170"
     CDS             complement(8089..>8337)
                     /locus_tag="VF991_15170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidine dehydrogenase"
                     /protein_id="HEX9557834.1"
                     /translation="DMLFKAIGQSFVVSPLGNGIAGPPERELLELSGGRIAINADRQT
                     SLANVWAGGDCVPGDDLTVSAVQDGKVAAEAIDRALRV"
BASE COUNT         1460 a         2751 c         2768 g         1358 t
ORIGIN      
        1 agccggtcac cgtcgccatc agcggcgcga agaccgcgcc ggcggcgcca ccgacgatga
       61 cgccgtagac aacctggaat tccaacaggc tggtggcgcg gctcgccagc gccaggccaa
      121 gcccgagcag gagcgcgccc aacagcacga cgatgcgcgg gccgaagcgg tcggtcagcg
      181 cgccccaacc gaaggccgcg acgcccatgg tcaggaagac gatcgtcatg gcgctcgaca
      241 cgccggtgcg cgaccagccg gtcgcgtccg acatcggctg caggaagacc gcgagcgaga
      301 acaccgcgcc gatggcgacg catcccatca gcgcaccggc gccgaccacg acccaaccgt
      361 actggagctt catcagggga ttcctcgaaa gctggagcgg gatacttaac ctattggttt
      421 agtgattgca acaggccggg cagccgccga aatccgcacg gtcgcgcagc cttcatcgct
      481 gatgacgatc ggtagggtcg gaaggattcc gaatggcgtg ggatattttt ctggagcgcc
      541 gattttcaag gacttcgact ggagctccgc cttaacagga aaggcaggat gaaaggcggt
      601 cgtacacacc atatgctctc ccgtgtttca gggagttgcc cccatgccca agaaaaagcc
      661 ggagtccgca acctcttcgc gacagtgcca aatggcgctt tcgaggtggg acaacgaagg
      721 gggcgccgga cccgccgggc cgcaaggcgg atcggtttcc gccgacgcgc catccaagat
      781 ccccgagctg accaatgccg aattggtgca gctgcgcatt cgcgtgatag cgctggagaa
      841 tttggtgatc gcgttgctcg cggaggcatc cgaacggcag ctcggtcttg ctcgggaaat
      901 ggcagcctac atctcgccac ggccgggctt cacccatcac cctctgacga ttcatgccgc
      961 cgctcagatg atcgatcttg ttgaaagagc cggtcatttc aagagcggga caccttcttg
     1021 accgtctttt gagcggcatc gcgcggacgt cccgccccga gcttccggcg gcgtagggcc
     1081 agcagggcat ggaaaccctg gtcagcacgg cggacgaggc cgcagcccac atcgccaccg
     1141 ctctgtgacc caggcgcagg ctggagcact gtttgtcgtc gagttgtcag tccgcctagg
     1201 ggcctggagt cgacttggcg gtgtctgttg acgtttcacc gcaacaagac aaactaatgc
     1261 atgtcggctg cgggcgccgt cgatcgcgtg agcatgcccg acttccccgc ggccaaggat
     1321 tcgcgctaat cttgatcaat tggtcaggtt gggaggataa gcatggcaat gttgatccgc
     1381 ggcggcaccg tggtgaccgc cgatcagagc taccgggcgg acgttctctg cgaccagggt
     1441 ctcatcaagg agatcgcgcc gaggatcgac gcgccggctg gcgcgcgcgt ggtcgatgcc
     1501 ggcggccaac tcgtcatgcc gggcggcatc gatcctcaca cccacatgga actgcccttc
     1561 atgggcacga ccgcgtcgga ggatttcttc actggcacgt cggcgggctt cgccggcggt
     1621 accactatga tcatcgactt cgtgatcccc aacccgaagg agccgctgct ggcggcctac
     1681 aacaaatggc ggggctgggc ggagaagtcg gctggcgact attccttcca cgtcgcggtc
     1741 acttggtggg atgacagcgt ccatcgcgat atgggcacgc tcaccaagga gcacggtgtc
     1801 aacagcttca agcacttcat ggcctacaag ggcgcgatca tggccgagga cgaggtgctg
     1861 gtgaacagct tcacccgcgc ccgcgagctt ggcgcgatct gcaccgtcca cgccgagaat
     1921 ggcgagctgg tattccatct gcagcagcag ctcctgaaag ccggcataac cggccccgag
     1981 ggccatccgc tgtcgcggcc gcccgaggtc gagggcgagg cggccaaccg cgccatccgg
     2041 atcgcccagg tgctgggcgt gccgctctat atcgtgcaca attcctgccg cgaatcgctc
     2101 gaggccatca cgcgcgcgcg caacgagggc cagcgcgtat tcggcgaggt gctggccggc
     2161 cacctcgtgg tcgatgattc ggtttatcgc aatcccgact ggaacgtggc ggcggcgcac
     2221 gtgatgagcc cgccgttccg gcccaaggag caccaggaag tcctgtggcg cggcctgcag
     2281 tcgggcaatc tgcagaccac ggcgaccgac cactgctgct tctgcgcgcc gcagaaggag
     2341 atgggccgtg ccgacttcac caagatcccc aacggcaccg gcggcgtgga ggatcgtatg
     2401 tcgatcctct ggcactacgg cgtggcgacc ggccggctga cgcccaacga gttcgtgcgc
     2461 gtcacctcga ccaacgccgc gcagatcttc aacatctacc cgcgcaaggg ctcgatcagc
     2521 gtcggcgcgg atgccgatat tgtggtgtgg gatgccaacg ccaagcgcac catctccgcg
     2581 aagactcatc accagaaggt cgactacaac atcttcgagg ggctcaccgt gcaggggctc
     2641 gccacgcaca cgatctcgca aggcaacgtc gtgtgggcgg acggccagct cgacgcgaag
     2701 cgcggcgccg gacgttatat tccgcggccg accttcgcgc ctttctttga tgccgtccgg
     2761 cgccagtctg atctcaaggc gccacgcgcg gtaccgcgta tggcggccga gtagcaaaca
     2821 cacaactcaa acgcctcccc cgtcatacgg gggaggtgcg gctttccccc tccggccctg
     2881 caggccacct cccccgtatg acgggggagg cttcgtagcg agcggagatg ccgttacttc
     2941 ttcatagcct tgtcccacac gtcatgcgtc caggcgccga ccggcttctt ggtgatgacc
     3001 gggtcggagc tgcccttgag cagcacgtcg acagtgcgtt ggtagtcggc ctcctcgaga
     3061 tagcccaggc ccttgggctg gtcggccacg agcttggcga tctcgcccat catccgcgtc
     3121 tgatgcttct cggtctgcgc gccggtcgtg tcgttcttga gcacgatctt gaccgcttcg
     3181 ggctggttct tgatcgcata gtcccagccc ttcatcgagg cgcgcacgaa gcgggcgagc
     3241 ttgtcgaccg cggccgggtc cttgagcttg gcgtcgaggg tgtagagccc gtcctcgagc
     3301 gtcgccacgc cctggtcctc gtacttgaag acgaccagat cggcgggctt cacgccggcg
     3361 tcgatgatct gccagtactc gttgtaggtc atggtcgaga tgcaggccgc ctgtttctgc
     3421 agcaggggat cgacgttgaa gccctgcttc agcaccttga tgtcggcgtc ggcgcccgag
     3481 gtcttgagct tgagcttgtc catccacgac agaaacggat actcgttgcc gccgaaccag
     3541 acgccgagcg tcttgccctt gaagtcggcc ggcgtcttca cgccgctgtc ggcgcgacag
     3601 gtcagctcca tgcccgagcg cttgaacacc tgggcgatat tgacgagcgc gacgcccttc
     3661 tcgcgcgtcg cgagagccga cggcatccag tcgatcacca cgtcggcgcc gccgccggcg
     3721 atgacctgcg gcggcgcgac gtcggggccg ccggccttga tcgtgacgtc gaggttctcg
     3781 tccttgtaga agcccttgtc cttggccacg aagtagccgg cgaactgggc ctgtgtcacc
     3841 cacttcagct gcagggtgag cttgtcggct gcctgggcgc tcaggctcga taacgccagg
     3901 acggcggtgc cggccaaaat cggaagtctc ttcatgggtt cctccttgtc gctgtcgttg
     3961 cccttctaac tctgcccctg gcggtacgat ggatgccaga aggtcagtcc ccgctcgata
     4021 agcgcgaggg cgccgtagaa catcgatccg gcgaccgccg cgacggcgat tgtcgcccac
     4081 accatatcga cgttcatgcg accgatctcc accgaaatcc gaaagcccag gccgaccacc
     4141 ggggtgccga agaactccgc aacgatgccg ccgatcagcg ccaaggtcga gttgatcttc
     4201 aatgcattga agatgaaggg caaggcgttg ggcaggcgga gcttgcgcag cgtctggcca
     4261 tagcccgcgg cataggagtg catgagatcg cgctcgatgt tgtccgccgc ggccagcccc
     4321 gccagggtgt tcaccagcat ggggaagaag gtcatcacca cgatcaccgc ggccttcgac
     4381 tgccaatcga agccgaacca catgaccatg atgggcgcga tgccgacgat cgggatggcg
     4441 ctgaccagcg cgccgagcgg cagcaggccg cgctgcagga aggggctgcg gtcgaccagg
     4501 acggcgacca cgaagcccgc gccggaaccg agggcgaaac cggccagcac cgacttcagg
     4561 aaggtctgcc ggaaatcctg ccacagcagc ccggcattgg cggcaagctg atggccgatg
     4621 cgggctgggc tcggcagcag caccgacggc acatcgaagc ccaccgtcag gacctgccac
     4681 agccagagca gcagcacgcc gaacagcccc ggcacgacca gcgcgccgat ccagcgcggt
     4741 gtccgcaggt ccgccaggct ttcgagcccg cgccaggcca gcgcggcaac gccggcgacg
     4801 aggagccaga atcccggtgc ctcggggccg accgacaggc cgccatccag ggcggcgagc
     4861 ggcgcgctgg cgccgatcac cgcgccgccc aaagcgacga tacccgtgat cgggttgctt
     4921 gcgcgccgcc gcagcgtcgc gagcgcggcc agcaggcaaa ggcccacggc gacgagcggc
     4981 atgccgaggt cgtgccaatg gacgggtgcg ccgttgccga tgccgaccgg caggacgatg
     5041 gaggccagcg ccagaagggc ggccagcagc gcggcgccgt tcagcttcat ggcgctgctg
     5101 cccccatgcg ccgcagcgtg gtcagctcga cggcgccgac ggctgcgacc atgaccgcgc
     5161 cgagcagggc cgccatgaac agcgctgacc agatctgcac cgtctggccg tagtaggagc
     5221 cgctcagcag ccgcgcaccc aggccttcct gtgcgccggt cggcagctcg ccgacgatgg
     5281 cgccgaccag gctgatggca atcgcgacct tgagcgaagc gaacaggaag ccgaccgacg
     5341 caggccagcg cagcttccag aacacctgcc ggggcgtcgc cgaataggtg cgcatcaggt
     5401 cgagctgcag cggatcgggc gagcgcaggc ctttcaccat gccgatggtg accgggaaga
     5461 agcagagata catcgagatc accgccttgg gcatgaggcc ggtcaggccc atgttgccca
     5521 gcacgacgat gatcatcggt gcgatcgcga gaatcgggat ggtctgcgag gcgatgatcc
     5581 agggcagcag gctgcgatcg agcgtgcgcc agctcacgat gcccagcgac agcaggatgc
     5641 cgagcgcggt gccgaacagg aagcccacga tggccgccga gcccgtgacg taggcatgat
     5701 agaccaggct gcgcggcgag gtgacgtcgc gcgtgaacac gctgtcgtag aactcgagcg
     5761 ccacctgatg cggcgccggc agcaccgggc ggtcgagcga ccaggcggtc ttcacgaagg
     5821 tcgacgtcgc cgccggatcg ctggtctgct cgaggcgctg ctcgaccagg ccggcattca
     5881 gccagatcgc gccgagatac cagaggacga tgatcgccgt gaccacggcg gcgagcggca
     5941 gcgtgctgcc cttgcgcagg cgctgcagcg tggcgggcag ggccggtcgc agggccacat
     6001 cactcatagg aatgccccgc gcgcagcgcg cgacgtactt tcagcgcgat gtcgaggaag
     6061 gccggcgtct cgcgcatgtc gagcgtgcgg ttggccggca ggtggttctc gatgacttcg
     6121 aggatgcggc ccggccgcgg cgacatgacg atgatgcggt tggacaggaa caccgcttcg
     6181 ggaatcgaat gggtgacgaa gaccaccgtc ttctgcgtct gctcccagag ccgcagcagc
     6241 tgctcgttca ggtggtcgcg cgtgatctcg tcgagtgcgc cgaacggctc gtccatcagc
     6301 aggagcttgg gctcgaagct gagcgcgcgg gcgatcgaca cgcgctgctg catgccgccc
     6361 gagagctgcc aggggaactt gttggcgaac tcttctaggc cgaccatggc gaggtattgc
     6421 ctggcccgcg cctcgcgctc gggctttgcc acccccatga tctcgagcgg cagcatgagg
     6481 ttgcgccgca ccgtccgcca ggcatagagg gccggcgcct ggaagacgta gccataggcg
     6541 cgggcgagcc gggcctctcg gggtgacaga ccgttgacct tgatgtcgcc gccggtcggc
     6601 cgcgccagat cggccatcac gcgcaacagc gtggtcttgc cgcaacccga cggtccgatc
     6661 agcgagacga actcgccggc cttgatctgc agattgatct tggcgagcgc caccaccggc
     6721 gcctccgccg tctcgaaggt gagcgacagg tcgcgcaggt cgatggcgag aggagcggac
     6781 ggcgcggggc tttccttcac ttcgcggtct gccgcagggg attgttcgga tgctcgagcc
     6841 aggtgagcgg tcccttgccg gtcgcgactt cgaccatgct gatgcagtcc gtcaccggac
     6901 aggcatacat gcaaagattg cagccgacgc actccgcgtc gatcacttcg tagcgccgct
     6961 cgctgccggc cttcttggcg gcgatcgcct ggtgagaggt gtcctcgcag gcgatatggc
     7021 agaggccgca cttgatgcag gcctcctggt cgatcagcgc caccgtcttg tagttgaggt
     7081 cgagatgctg ccagtcggtg acgttgggca cggcgcggcc caggatgccg gtgacgccgg
     7141 catggccctt ggcgtcgagc cagttgctga ggccgtccac catgtcgtcg atgatcttga
     7201 agccgtaatg catcgccgcc gtacagacct gtacggtggt ggcgcccagc gcatggaatt
     7261 ccgccgcgtc ctgccaggtg gcgatgccgc cgatgcccga aatcggcagg ccggcgcatt
     7321 cgggatcgcg cgagatctcg gccaccatgt tgagcgcaat cggcttcacc gccgggccgc
     7381 aatagccgcc atgggtgccc ttgccggcca ccaccggctg cggcgccatg cgctcgagat
     7441 cgacgccgat gatcgaattg acggtgttga tcagcgacac gccgtcggcg ccgccgcgct
     7501 tggcggcgcg cgcgggcccc aggatgctgg ttacgttggg cgtgagcttc accagcaccg
     7561 gcatgcgcgt gtgctgcttg caccagcgcg ttaccatctc gacgtagtcc ggcacctggc
     7621 cgaccgcggc ccccatgccg cgctcggaca tgccgtgcgg gcagccgaaa ttcaactcga
     7681 cgccgtcggc gttggtctcc tcgaccttct tcaggatggt cttccagctg tcttcgacgc
     7741 agggcaccat caaagacacg accagcgcgc ggtcgggcca gtcgcgcttg acctgcttga
     7801 tctcgtcgag attgacctgc agcggccggt cggtgatcag ctcgatattg gtgaagccca
     7861 ccatgcgcat gccgccgact tccagggctc cgtagcgcga cgctgtgttg acgatgggcg
     7921 ggccgtcctc gcccagcgtc ttccagacta cgccgcccca accggccttg aaggcgcgca
     7981 ccacgttgta ggccttgtcg gtcggcggcg ccgaggcgag ccagaatgga ttgggcgact
     8041 tgatgccggc gaaggtggtg cgcagctcgg ccatggattt cctccctttc agacgcgcaa
     8101 ggcgcggtcg atcgcctcgg cggcgacctt gccgtcctgc accgcgctca cggtgagatc
     8161 gtcgcccggc acgcaatcgc cgccggccca gacgttggcg agcgaggtct ggcggtcggc
     8221 gttgatcgcg atgcgcccgc cgctcaactc gagcagctcg cgctccggcg ggccggcaat
     8281 gccgttgccc agaggggaga ccacgaagct ctggccgatc gccttgaaca gcatgtc
//
LOCUS       DASWGA010000649         2391 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_831620, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000649 DASWGA010000000
VERSION     DASWGA010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831620"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..840
                     /locus_tag="VF991_15175"
     CDS             19..840
                     /locus_tag="VF991_15175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012483927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9557835.1"
                     /translation="MISGVLAGGMYGLLALGLSLSWGLLKLVNLSHFALAFLAAYLTY
                     ELGTTYHVAPWWSAAMVVPAMFLIGVAQHWLFDRFKVNELASLLITFSFAVILEVAIQ
                     LYWTADYRRFETPYSTLSIKAGPFYIPVLELVLCLVAGVLAWGTWLWLRKTYVGKALR
                     AAAEDADIAAAYGVDYKKLAYLLSGMGAAYAGVAGTFIALIATLAPAQIWAWLGVVFA
                     VVIIGRLGNPLGALAAGMLIGASESLAMAVLSPAWAPVVSFSVLIAILLWDPEWL"
     gene            837..>2391
                     /locus_tag="VF991_15180"
     CDS             837..>2391
                     /locus_tag="VF991_15180"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9557836.1"
                     /translation="MNAACVISRDLPKVVAGLGIVAFALLPTAGLPAFYDSFFYLVFF
                     WVSLSTSWALLSGFAGYFSLGHAAFFGVGMYTTATLTTKFQVPFLATIPAAAAIAALL
                     GIGIGAVVFRLRRLRGELFALLTLAVTFVIATIILNTPIDGGGGVFMSAVPLPHLMST
                     PTGTIYMLGFAICVLTLAIAWWVAHSRLGMGLFAIHDDEDVAEAKGVPTFRYKLLAFA
                     LSAGIAGAVGGIHAMYVGFLTVAGTFELTVPLYVVLMSVLGGSRHWFGPAIGAAAITT
                     LLYAFISGGEAMVGRAIVGLILILAILWLPDGVIPAIQHWLKRRRPRAIRAHAEVVPV
                     VPTARPIGDRPILEVRGVTKRFGGLQALGGVDLEVREGEIFGLVGPNGSGKTTLINVI
                     AGFYPLTSGTITVDGAAIGHAPAHEIARRGVARTYQIPRPFVNMTVLDNVALCATFGG
                     PVRSQAEIRDEARHWIGFTGLAGKEEALPAELNLHERKFLELARALAARPKLLLLDEV
                     LSGLNPAEID"
BASE COUNT          300 a          838 c          787 g          466 t
ORIGIN      
        1 acgctcctcg gccaggcgtt gatctccggt gtcctggccg ggggcatgta cggtttgctg
       61 gcgctcgggc tcagcctcag ctggggcctg ctgaagctgg tcaatctcag ccactttgcg
      121 ctggccttcc tcgccgccta cctgacctac gagctcggca cgacctatca cgtggcgccg
      181 tggtggtcgg ctgccatggt cgtgccggcg atgttcttga tcggcgtggc ccagcactgg
      241 ctgttcgacc gcttcaaggt gaacgagctc gcgtcgctgt tgatcacctt cagcttcgcc
      301 gtgatcctcg aagtggcgat ccagctctac tggaccgccg actaccgccg cttcgagacg
      361 ccctactcga cactgtcgat caaggccggc ccgttctaca tcccggtgct cgagctggtg
      421 ctttgcctgg tggcgggcgt gctggcctgg ggcacctggc tgtggctgcg caagacctat
      481 gtcggcaagg cgttgcgcgc cgccgccgag gacgccgaca tcgccgcggc ctatggcgtc
      541 gattacaaaa agctcgctta cctcctgtcg ggcatgggtg ctgcctatgc cggcgtcgcc
      601 ggcaccttca tcgccctgat cgcgacgctc gcaccggcgc agatctgggc ttggctcggc
      661 gtggtgttcg ccgtcgtcat catcggccgg ctgggcaatc ccctgggcgc gctggcggcc
      721 ggcatgctga tcggtgcgag cgaatccctc gccatggcgg tcctgagccc ggcctgggcg
      781 cccgtcgtgt cgttctcggt gctgatcgcg atccttttat gggatccgga gtggctatga
      841 acgccgcgtg cgtcatttct cgtgatctgc ccaaggtcgt ggccgggctc ggcatcgtgg
      901 ccttcgcgct gctgccgact gcgggcctgc cggcgttcta cgattcgttc ttctatctcg
      961 tgttcttctg ggtctcgctg tcgacgagct gggcgctgtt gagcggcttt gccggctatt
     1021 tcagcctggg ccatgccgcc ttcttcggcg tcggcatgta cacgacggcg acgctgacca
     1081 cgaagttcca ggtgccattc ctcgcgacca ttcccgccgc ggcggcgatc gcggcgctgc
     1141 tgggcatcgg catcggcgcc gtggtgttcc gcctgcgccg cctgcgcggc gagctgtttg
     1201 cgctgctgac gctcgccgtc accttcgtga tcgccaccat catcctgaac acgccgatcg
     1261 acggcggcgg tggcgtgttc atgagcgcgg tgccgctgcc gcacctcatg tcgactccga
     1321 ccggcacgat ctacatgctg ggtttcgcaa tctgcgtgct gacgctcgcg atagcctggt
     1381 gggtcgccca ttcgcgcctc ggcatgggcc tgttcgccat ccacgacgac gaggacgtgg
     1441 ccgaagccaa gggcgtgccg accttccgct acaagctttt ggccttcgcg ctgtcggccg
     1501 gcatcgccgg cgccgtgggc ggcatccatg ccatgtatgt cggcttcctc accgtcgccg
     1561 gcaccttcga gctcaccgtg ccgctctatg tcgtattgat gagcgtgctg ggcggctcgc
     1621 gccactggtt cggcccggcg atcggcgcgg cggccatcac cacgctgctc tacgccttta
     1681 tcagcggcgg cgaggccatg gtcggccgcg ccatcgtcgg cctgatcctg atcctggcca
     1741 tcctgtggct gcccgacggc gtgatcccgg cgatccagca ctggctgaag cgccggcggc
     1801 cccgggcgat tcgcgcccac gccgaggtgg tgcccgtcgt gccgaccgcc cggccgatcg
     1861 gcgatcgccc gatcctcgaa gtgcgcggtg tcaccaagcg cttcggcggc ctgcaggcgc
     1921 tgggcggcgt cgatctcgag gtgcgcgagg gcgagatctt cggcctggtc ggacccaacg
     1981 gctcgggcaa gaccacgctg atcaacgtca tcgccggctt ttatccgctg accagcggca
     2041 ccatcacggt cgacggcgcg gcgatcgggc acgccccggc gcacgagatc gcccgccgcg
     2101 gcgtggcgcg cacctaccag atcccccggc cgttcgtgaa catgaccgtg ctcgacaatg
     2161 tcgcgctctg cgccaccttc ggcgggccgg tgcgcagcca ggccgagatc cgcgacgagg
     2221 ccaggcactg gatcggcttc accgggctcg ccggcaagga agaggcgctg ccggccgagc
     2281 tcaacctgca cgaacgcaag ttcctcgagc tggcacgcgc gctcgctgcg cgacccaagc
     2341 tgctgctgct cgacgaggtc ctgtcgggcc tcaatccggc cgagatcgac a
//
LOCUS       DASWGA010000650         4456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1337514, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000650 DASWGA010000000
VERSION     DASWGA010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4456
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1337514"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VF991_15185"
     CDS             <1..234
                     /locus_tag="VF991_15185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557837.1"
                     /translation="LADTGKTALFITHDLIEAVALSDRILVMSQRPGRIIEEITVDIG
                     DRDNPMKRRQHPRVGDYVVRLMGLLQIEQAAAS"
     gene            258..1241
                     /locus_tag="VF991_15190"
     CDS             258..1241
                     /locus_tag="VF991_15190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557838.1"
                     /translation="MSKLLRLRLALAGFCLAAGMTVGVGQASAEDVTYLLPAPLSLPA
                     FGPFVVAQQRGYFKAEGLNVTFQVGKGGVDVAKQVGAGNAVIGGGIGDTSIIVRPNGV
                     PVKAVAVLGGGALMQLVLDKDKGLKTVKDLKGKTITVLAYQDTTYFALLGMLASQGMT
                     KDDVNAQAAGPVNVWKLFLAGQSDAFASVPDWTAQVMMAKKNIEMIPSDKLFKSMAQA
                     IIASDDTIKNNPQLIQKVVRATLKGMKDIMADPAAAAVDFVKATPELAGKEDFVTLSF
                     KLYNQYVYGGQKVLGEMDEARLMALQDFYAKEGLIKSKTAVKDLYTNPFVQ"
     gene            1250..2038
                     /locus_tag="VF991_15195"
     CDS             1250..2038
                     /locus_tag="VF991_15195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557839.1"
                     /translation="MGALQPGVRPMVMGSLSLLVIFLAAWQWAPGLFGIPPFIIPPAS
                     AVWDEFLNMLARDRLVYHTAITAMQVGVGFVLGVLLGILCGFALGLSPTAEFVLSPYI
                     LALQIAPKVAFAPLFIIWFGYTVYPKILVCVLIVFFPVMINVLGAVRALDPDIVRLAK
                     SFTASRLQVFWKIEFPAAMPPLFAGLRIAATLAVIGVLVGELVGGNIGLGYLLAFAEG
                     AGDTAKVFVTIILLTLIGIVLYGIVVAVETRVLHYLPARARLAI"
     gene            2035..2793
                     /locus_tag="VF991_15200"
     CDS             2035..2793
                     /locus_tag="VF991_15200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9557840.1"
                     /translation="MSLQGRTIVITGAGRGLGRAFAEACAAAKAETIVVADVRMDWGE
                     ATVEALRRSGAKAKFLPVDLGDAGSIEAFAAKVAGHYSHIDGLVNNGAIATGIGGKTF
                     EEIDSETWDKVMAVNVRGTWLMTRAMAPLLRRSRLGGRIVNLASDTALWGAPRLLHYV
                     ASKGAVISMTRSLARELGPDGIAVNAIAPGLVLVEATEYVPEERRQLYVSGRAMQRAQ
                     HPEDVTAVVVFLLGQGAGFVTGQLLPVNGGFVFN"
     gene            2802..3668
                     /locus_tag="VF991_15205"
     CDS             2802..3668
                     /locus_tag="VF991_15205"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEX9557841.1"
                     /translation="MASDPLPTENRYTENRYIVPALAQGLGILSLFGSDHRSFTAPEI
                     AKKLALPRTKVFRLLQTLQSMDYLRCEPDKRRFSLGPALLSRGFEYLASLDMVEVAQP
                     ILQRLRDRTGLSAHMAIRDGREIIYVSRFAARSTIASSVNIGTRFPVHATIMGRMTIC
                     EMSDRELAQLFRDQPLKRFTKQTPTTLKALKALLAGDRARGYAVSQAFFEAGVSAIAA
                     PVRDGAGRIVAAINVTAVNAHIDEQAMHGELKDAVLEAAAKISCWLYDSAVAGSAGFA
                     KPLPEAGKPVRG"
     gene            3690..>4456
                     /locus_tag="VF991_15210"
     CDS             3690..>4456
                     /locus_tag="VF991_15210"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9557842.1"
                     /translation="MPDTSLLQQPSALAREMRSYTGLFTEKTFDWDAFPASRGIPDLL
                     RAQLRYVGAGGSPKSNDPSTLKAEHFTFSLVNQPVGKFAASHAHEVVEHFFILQGVLT
                     VGTVWGAEVVEVKLGPKDLLLNMSGRPHGFRNDGVEPVLMQITVGSGTPEMPVHVCHP
                     KNKNLELSRRFGAPGPDKIQLFSPESSDRRHQELAKHVVRYRDRTPVWDKAGFARLAY
                     VGDGGAPAHGYRMDMIHLPKGVAVRPYVRDVEDVYFVL"
BASE COUNT          734 a         1467 c         1476 g          779 t
ORIGIN      
        1 ctggccgaca ccggcaagac ggcgctgttc atcactcacg atctcatcga ggcggtggcg
       61 ctgtcggacc gcatcctggt gatgagccag cgcccgggcc gaatcatcga ggaaatcacg
      121 gtcgatatcg gcgatcgcga caatccgatg aagcgccggc aacatccaag ggtcggggac
      181 tatgtcgtgc ggttgatggg cctgctgcaa atcgagcagg ccgccgcgtc gtgaacatga
      241 aagatagggg gcttgcgatg tcgaaactct tgcgtctgcg tcttgcattg gccgggttct
      301 gcctggccgc gggaatgacg gttggtgtgg gccaggcttc ggccgaggac gtcacttatc
      361 ttttgcccgc gccgctttcc ctgccggcgt tcggcccgtt cgtggtcgcc cagcagcgcg
      421 gttacttcaa ggccgagggc ctgaacgtca ccttccaggt cggcaagggc ggcgtcgatg
      481 tcgccaagca ggtcggcgcc ggcaacgcgg tgatcggcgg cggcatcggc gacacctcga
      541 tcatcgtgcg gcccaacggc gtgccagtga aggcggtggc cgtgctgggc ggcggcgcgc
      601 tgatgcagct ggtgctcgac aaggacaagg ggctcaagac cgtcaaggac ctcaagggca
      661 agaccatcac cgtgctggcc taccaggaca cgacctattt cgcgctgctc ggcatgctcg
      721 cgagccaggg catgaccaag gacgacgtca acgcccaggc cgccggtccg gtcaatgtgt
      781 ggaagctgtt cctggccggg cagtcggatg ctttcgcctc ggtgcccgac tggacggcgc
      841 aggtcatgat ggccaagaaa aacatcgaga tgatcccgtc ggacaagctg ttcaagagca
      901 tggcgcaggc gatcatcgcc tccgacgaca cgatcaagaa caatcctcag ctgatccaga
      961 aggtcgtgcg cgccacgctc aagggcatga aggacatcat ggccgatccg gccgccgccg
     1021 ccgtcgactt cgtcaaggcg acgcccgagc tcgccggcaa ggaggacttc gtcaccctgt
     1081 cgttcaagct ctacaaccag tacgtctacg gcggccagaa ggttttaggc gaaatggacg
     1141 aggcgcgcct catggccctg caggacttct acgccaagga aggcctgatc aagtccaaga
     1201 cggcggtcaa ggacctctac accaacccgt tcgtccaatg agcgcagcgt tgggcgccct
     1261 ccagcccggc gttcgcccca tggtcatggg cagcctttcg ctgctcgtga tcttcctggc
     1321 ggcctggcaa tgggcgccgg gcctgttcgg cattccaccc ttcatcatcc cgcccgccag
     1381 cgcggtgtgg gacgagtttc tgaacatgct ggcccgcgat cggctggtct atcacacggc
     1441 gatcacggcg atgcaggtcg gcgtcggctt cgtgctgggc gtcctgctcg gcatcctgtg
     1501 cggcttcgcg ctcggcctgt cgccgaccgc cgagttcgtg ctgtcgcctt acatcctggc
     1561 gctgcagatc gcgcccaagg tggccttcgc gccgctgttc atcatctggt tcggctacac
     1621 ggtctatcca aagatcctgg tctgcgtgct gatcgtgttc ttccccgtga tgatcaatgt
     1681 gctgggcgcg gtgcgggcgc tcgatcccga tatcgtgcgg ctggccaaat cgttcaccgc
     1741 cagccgcctg caagtcttct ggaagatcga gtttcccgcc gccatgccac cgttgttcgc
     1801 cggcctacgg atcgccgcca ccctggcggt gatcggcgtg ctggtgggcg agctggtcgg
     1861 cggcaatatc ggcctgggct acctcttggc cttcgccgag ggcgcgggcg acaccgccaa
     1921 ggtgttcgtc accatcatcc tgctcaccct gatcggcatc gtgctctatg gcatcgtcgt
     1981 cgccgtcgag actcgcgtgc tgcactacct gccggcgcgg gcccggctcg ctatatgagt
     2041 ctacagggcc gcacgatcgt gatcaccggc gccgggcgcg gactcggccg cgccttcgcc
     2101 gaggcctgcg cggcggcaaa ggcggaaacg atcgtcgtgg ccgacgtgcg gatggattgg
     2161 ggcgaggcca cggtcgaggc gctgcggcgc tccggtgcaa aggccaaatt cctgccggtc
     2221 gatcttggcg acgccggctc gatcgaggcc ttcgcggcga aagtcgcggg gcactacagc
     2281 cacatcgacg gcctggtgaa caacggcgcg atcgccacag gcatcggcgg caagaccttc
     2341 gaggagatcg acagcgagac ctgggacaag gtgatggcgg tcaatgtccg cgggacatgg
     2401 ctgatgaccc gggcgatggc gccgctgctg cggcgctccc ggctgggcgg ccgcatcgtc
     2461 aacctggcgt cggacaccgc cctgtggggg gcgccgcggc tgctccatta tgtcgcgagc
     2521 aagggcgcgg tgatctcgat gacccgctcg ctggcgcgcg agcttggccc cgacggcatt
     2581 gccgtcaacg ccattgcgcc gggcctggtg ctggtcgagg cgaccgaata cgtgcccgag
     2641 gaacgccggc agctctatgt gtcgggccgc gccatgcagc gcgcccagca tcccgaggat
     2701 gtgacagccg tcgtggtgtt tctgctcggg cagggggcgg gcttcgtcac cggccagctg
     2761 ctccccgtca acggcggctt cgtcttcaac tgaggcgaga gatggccagc gatccgcttc
     2821 cgaccgagaa caggtacacc gagaacaggt acatcgtgcc ggcgctggcg caggggctcg
     2881 gcatcctgtc gctgttcggc agcgatcacc gcagttttac ggcgccggaa attgctaaaa
     2941 agctggcgct gccgcgcacc aaggtcttcc gcctgctgca gaccctgcag tcgatggact
     3001 acctgcggtg cgaaccggac aaacgccgtt tcagcctggg cccggcgctg ctcagccgcg
     3061 gcttcgagta tctcgcctcg ctcgacatgg tcgaggtggc gcagcccatc ttgcagcggt
     3121 tgcgtgaccg caccgggctg tcggcgcaca tggcgatccg cgacggccgg gagatcatct
     3181 atgtctcgcg ctttgccgcc cgcagcacga tcgccagcag cgtcaatatc ggcacgcgct
     3241 ttcccgtcca cgccacgatc atgggccgca tgacgatctg cgagatgagc gatagggaac
     3301 tggcgcagct cttccgcgac cagccgctca agcgtttcac caagcagacg ccgacgacgc
     3361 tgaaggcgtt gaaggcgctg ctggcgggcg atcgcgcgcg cggctatgcg gtcagccagg
     3421 cgttcttcga ggcgggcgtc agcgcgatcg ctgcaccggt tcgcgacggc gccggtcgca
     3481 tcgtggcggc catcaacgtc acggcggtca atgcccatat cgacgagcag gccatgcatg
     3541 gcgagctgaa ggatgccgtc ctcgaagccg ccgccaagat ctcgtgctgg ctctatgaca
     3601 gcgctgttgc cggctcagcc gggttcgcaa agccgcttcc cgaggccggg aagccggtca
     3661 ggggttaatt caagtcggag gaatgtgaca tgccggacac cagccttttg cagcaaccga
     3721 gcgccctcgc gcgcgaaatg cggtcctata cgggcctgtt caccgagaag acgttcgact
     3781 gggacgcctt ccccgccagt cgtggcattc ccgacctgct gcgcgcccag ttgcgctatg
     3841 tcggcgccgg cggttcgccc aagtcgaacg atccctcgac cttgaaggcc gagcacttca
     3901 ccttcagcct ggtcaaccag ccggtcggca agttcgcggc ctcgcacgcg cacgaggtcg
     3961 tcgagcattt cttcatcctg cagggcgtgc tcacggtcgg cacggtgtgg ggcgcggagg
     4021 tggtcgaggt gaagctcggc cccaaggacc tgctgctcaa catgagcggc cggccgcacg
     4081 gcttccgcaa cgacggcgtc gagccggtcc tgatgcagat caccgtcggc agcggcacgc
     4141 ccgagatgcc ggtccatgtc tgccatccca agaacaagaa cctcgagctg tcgcgtcgct
     4201 tcggcgcccc gggaccggac aagatccagc tgttctcgcc cgagagcagc gaccggcggc
     4261 accaggagct cgccaagcac gtcgtgcgct atcgcgaccg cacgccggtg tgggacaagg
     4321 caggcttcgc gcgcctcgcc tatgtcggcg acggcggcgc gccggcgcac ggctatcgca
     4381 tggacatgat ccatctgccc aagggtgtcg ccgtgcgccc ctacgtgcgc gacgtcgagg
     4441 acgtgtactt cgtcct
//
LOCUS       DASWGA010000651         3722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1721224, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000651 DASWGA010000000
VERSION     DASWGA010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3722
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1721224"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1413)
                     /gene="serA"
                     /locus_tag="VF991_15215"
     CDS             complement(<1..1413)
                     /gene="serA"
                     /locus_tag="VF991_15215"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEX9557843.1"
                     /translation="MAKPKVLISDELSPRAVEIFSERGCDVDFKPGLKPAELRAIIGN
                     YEGLAIRSATKVTAEVLAEARKLKVVGRAGIGVDNVDIKAATAHGVVVMNTPYGNAIT
                     TAEHAIALMFAVARQIPEANASTQAGKWEKNRFMGTELSFKMLGLIGCGNIGSIVAER
                     AIGLKMRVMAYDPFLSDQRALELGVEKASLDQMLARADFITVHTPLTEQTKNILSRAN
                     LMKTKKGVRIINCARGGLVDELAVRDLLLSGHIAGAGFDVFTEEPAKSNVLFGAPNLV
                     STPHLGAATVEAQENVALQVAEQMSDYLLTGAIVNSLNMPNVSAEDAPKLAPYLDLAE
                     KLGSFAGQLTDTDIKAVSIEYEGDVAALNVKPLSQVALMGVLRPQLVSVNMVNAPVIA
                     RERGVEMAEVKHERAGDYHSMIRLTVTTEKYTRAVTGTLFGGKHPRIVDIKGIEIEAE
                     FAPHMLYITNDDKPGFIGRLG"
     gene            complement(1427..2593)
                     /locus_tag="VF991_15220"
     CDS             complement(1427..2593)
                     /locus_tag="VF991_15220"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEX9557844.1"
                     /translation="MKPNMRPARPDFSSGPCAKRPGWTPEALKDAATGRSHRSKTGKK
                     KIVETVDRSRALLGIPADYRVGIVPASDTGAVEMALWSLLGARPVDMLTWESFGEGWV
                     TDVVKQLKLKDARVLKAPYGQIADLRQVDWKHDVVFTWNGTTSGVKVPNGDWIAADRE
                     GLAICDATSAVFAMDLPWPKLDVVTWSWQKVMGGEGAHGMLVLSPRAVQRLESYTPSW
                     PLPKIFRLTSGGKFSEAIFKGDTINTPSLLCVEDAIDGLRWGESIGGLKALMARSEAN
                     LGVLEKFVAERQWIGFLAADKAIRSNTSVCLTITAPWFTALPADRQAAAAKKMADLLE
                     SEKAGFDLGSYRDAPPGLRIWCGATVEKADLEALLPWLDWAYGEIEREFGAKAA"
     gene            2713..3108
                     /locus_tag="VF991_15225"
     CDS             2713..3108
                     /locus_tag="VF991_15225"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005488 - binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX9557845.1"
                     /translation="MTVPHQIRHTVRFAVPPSAIYRALMDSRQHRAFTGSPAKIEPKV
                     GGRFTAWGPHLSGITVELVKDKRIVQAWRAENWPAGHYSIATFELRRAGDGTVLTFTQ
                     AGVPAKNVKGINEGWKTHYWQPLKKFFAS"
     gene            complement(3105..>3722)
                     /locus_tag="VF991_15230"
     CDS             complement(3105..>3722)
                     /locus_tag="VF991_15230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557846.1"
                     /translation="INVMPWLTVAWGLLLGALIPRSLVIAAVLAVLSFVPLAWNVGQL
                     ARFRGGDTAAVAALAALEQRFPPASTVFVYWGFEPITTWQYALWSHTWDWDGAATIGP
                     APTADPKFKWIAVDAGAIRHPDWTAEQHAQSIKRDIDQALDRGYRVAISDVWRWSPDE
                     LAGQLGGLSAANRAGAIHSMLHDNYQAEPVFSDPVAGTYYALRRR"
BASE COUNT          602 a         1229 c         1259 g          632 t
ORIGIN      
        1 gcccagccgg ccgatgaagc ccggcttgtc gtcgttggtg atgtagagca tgtgcggggc
       61 gaactcggcc tcgatctcga tgcccttgat gtcgacgatg cgcggatgct tgccgccgaa
      121 cagcgtgccg gtgacggcgc gggtatattt ctcggtggtc acggtcagcc ggatcatcga
      181 atggtagtcg ccggcgcgct cgtgcttgac ctcggccatc tcgacgccgc gctcgcgggc
      241 gatcaccggc gcgttcacca tgttcaccga gaccagttgc gggcgcagca cgcccatcag
      301 cgcgacctgg gagagcggct tgacgttgag cgccgccacg tcgccctcgt attcgatcga
      361 caccgccttg atgtcggtgt cggtgagctg gccggcgaac gagccgagct tctcggcgag
      421 gtcgagatag ggcgcgagct tgggcgcgtc ctcggccgag acgttgggca tgttgagcga
      481 gttcacgatg gcgccggtca gcaggtagtc cgacatctgc tcggcgacct gcagcgccac
      541 gttctcctgc gcctcgacgg tggcggcgcc gagatggggc gtgctgacca ggttgggcgc
      601 gccgaacagg acgttgctct tggccggctc ctcggtgaag acgtcgaagc cggcgccggc
      661 gatgtggcct gagagcagca ggtcgcgcac cgccagctcg tcgacaaggc cgccgcgcgc
      721 gcagttgatg atgcgcacgc ccttcttggt cttcatcagg ttggcgcggc ttaaaatgtt
      781 cttggtttgc tcggtgagcg gcgtgtgcac ggtgatgaaa tcggcgcgcg ccagcatctg
      841 gtcgaggctc gccttctcga cgccgagttc cagggcgcgc tggtcggaca ggaacggatc
      901 gtaggccatc acccgcattt tcagcccgat ggcgcgctcg gcgacgatcg agccgatatt
      961 gccgcagccg atcaggccga gcatcttgaa gctgagctcg gtgcccatga aacgattctt
     1021 ttcccatttg ccggcctggg tcgaggcgtt ggcctcgggg atctgccgcg ccacggcgaa
     1081 catcagggcg atggcgtgct cggccgtggt gatggcgttg ccgtagggcg tgttcatgac
     1141 gacgacgccg tgcgcggtgg cggccttgat gtcgacattg tcgacgccga tgccggcgcg
     1201 gcccaccact ttcagcttcc tggcctcggc caacacctcg gccgtgacct tggtcgccga
     1261 acggatggcg agcccctcgt agttgccgat gatggcgcgc agctcggccg gcttcaggcc
     1321 gggcttgaaa tcgacgtcgc agccgcgctc ggaaaagatt tccacggcgc gcggggacag
     1381 ctcatcggag atgagcacct tgggttttgc catgaccaaa aactcctcag gccgccttcg
     1441 cgccgaattc ccgctctatc tcgccgtaag cccagtcaag ccacggcagc agggcctcga
     1501 gatcggcttt ctccaccgtg gcgccgcacc agatacgcag gcccggcggg gcgtcgcggt
     1561 aggagccaag gtcgaagccc gccttttcgc tctcgagcag gtcggccatc ttcttggcgg
     1621 cagcggcctg cctgtcggcc ggcagggcgg tgaaccatgg cgccgtgatg gtgagacaga
     1681 ccgaggtgtt ggagcggatc gccttgtcgg cggcgaggaa gccgatccat tgccgctcgg
     1741 cgacgaactt ttccagcacg ccgagattgg cctcggagcg cgccatcaat gccttgagcc
     1801 cgccgatgct ttcgccccag cgcaggccgt caatggcgtc ctcgacacag agcagcgagg
     1861 gcgtgttgat ggtgtcgccc ttgaagatcg cttcggagaa tttgccgccc gaggtcaggc
     1921 gaaagatctt gggcagcggc caggaaggcg tgtagctctc cagccgctgc accgcacgcg
     1981 gcgacagcac cagcatgccg tgcgcgcctt cgccgcccat caccttctgc caggaccagg
     2041 tcacgacatc gagctttggc cacggcaggt ccatggcgaa gacggccgag gtggcgtcgc
     2101 agatcgccag cccctcgcgg tcggcggcga tccagtcgcc gttggggacc ttcacgcctg
     2161 aggtcgtgcc gttccaggtg aagacgacgt cgtgcttcca gtcgacttgc ctcaggtcgg
     2221 cgatctggcc gtagggcgcc ttcaacacgc gggcgtcctt cagcttcagt tgcttgacga
     2281 cgtcggtgac ccagccctcg ccgaagctct cccaggtcag catatcgacc ggccgggcgc
     2341 ccaacagcga ccacagcgcc atctcgacgg cgccggtgtc cgacgccggc acgatgccga
     2401 cgcgatagtc ggcggggatg cccaaaagcg cgcgcgagcg gtcgaccgtc tcgacgatct
     2461 tcttcttgcc cgtcttggat cggtgggacc gcccggtggc ggcatctttc aaggcttcgg
     2521 gcgtccagcc aggacgcttg gcgcagggtc cggatgaaaa atcgggacgc gccggacgca
     2581 tgttcggctt catctaaaac ctctcccttg cagaagagct gcactccggt gggggagcgt
     2641 ggcccgccgc ccctatacgg gcggcggcca taggcgtcaa tgtgcagtgt ttgtcgcaag
     2701 ggagcccgac cgatgaccgt cccccaccag atccggcaca ccgtccgctt cgccgtgccg
     2761 ccgagcgcga tctaccgggc gctcatggac tcgcgccagc accgcgcctt caccggctcg
     2821 ccggccaaga tcgagcccaa ggtcggcggc cgcttcaccg cctggggacc gcatctcagc
     2881 ggtatcaccg tcgagctggt caaggacaag cggatcgtcc aggcgtggcg ggcggagaac
     2941 tggccggccg gccactactc catcgccacc ttcgagctca ggcgcgccgg cgacggcacg
     3001 gtgctcacct tcacccaggc cggcgtgccg gcgaaaaacg tgaagggcat caacgaaggc
     3061 tggaagaccc actactggca gccgctgaaa aaattcttcg cgtcctagcg tcgccgcagc
     3121 gcgtagtacg tgccggcgac aggatcgctg aagaccggct cggcctggta attgtcgtgc
     3181 agcatgctgt ggatggcgcc cgcccggttg gccgccgaca ggccgccgag ctggcccgcc
     3241 agttcgtccg ggctccagcg ccagacgtcg gaaatggcga cgcggtagcc gcggtcgagc
     3301 gcctggtcga tgtctcgctt gatcgactgg gcgtgctgct cggccgtcca gtcgggatga
     3361 cggatggcgc cggcgtcgac ggcgatccac ttgaatttcg ggtcggccgt cggcgcgggg
     3421 ccgatggtgg cggcgccgtc ccagtcccag gtgtggctcc acagggcgta ctgccaggtc
     3481 gtgatcggct cgaagcccca atagacgaac accgtcgatg ccggcggaaa gcgctgctcg
     3541 agcgcggcaa gtgctgccac cgccgccgtg tcgccaccgc gaaagcgcgc gagctggccg
     3601 acgttccagg cgagcggcac aaaagacagc acagcgagga ccgcagcgat aacgagcgat
     3661 ctcgggatca acgcccccag cagcaggccc cacgccaccg tcaaccacgg catgacgttg
     3721 at
//
LOCUS       DASWGA010000652         2129 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1337675, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000652 DASWGA010000000
VERSION     DASWGA010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1337675"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VF991_15235"
     CDS             <1..255
                     /locus_tag="VF991_15235"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX9557847.1"
                     /translation="VDRVLARFANTGAQLVVDIAAALNDANRLADVAHKLKGAARAAG
                     ATRLGDLAAALEQSGDRADIAPLVTEWQRVARELNGPPGA"
     gene            complement(353..1273)
                     /locus_tag="VF991_15240"
     CDS             complement(353..1273)
                     /locus_tag="VF991_15240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEX9557848.1"
                     /translation="MSQSPRPRGLGRGLSALLGDEDVAATVVPRAADTAGRDAATIAA
                     PGRAPFTLPIGHLRPGKMQPRTTFEDLEALVDSVKEFGLLQPILVRPVAGQADAYEIV
                     AGERRWRAAQQAQLHDIPVVVRNLGDQDALQLGLIENLQRADLTAIDEAQAYRRLVED
                     FGQSHDDIAKTVGKSRPHVANTVRLLELPASVQEMLRLGQLSAGQARALIGVPDPLAM
                     AQRALQEQLTVRDLERLSGSLKRKSKGGAPRAEAAKSADTRALEKRIEEALGLKAELK
                     LRGLGEQSLLTLEIRDFDQLDTVVERLTRR"
     gene            complement(1257..2114)
                     /locus_tag="VF991_15245"
     CDS             complement(1257..2114)
                     /locus_tag="VF991_15245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9557849.1"
                     /translation="MTPSSFESVPTAPQLFAIANQKGGVGKTTTAINLATALAAVGEQ
                     VLLIDLDPQGNASTGLAISRSERSPGSYEFLLGFAPLADCVRPSQIPGLHVMPASIAL
                     SGAEIELIDLERREHRLADALGPRDSEARAPWTTILVDCPPSLGLVTLNALVAVDAVL
                     VPVQAEFLALEGIGALASTVDRIKKRLNPRLHIAGVILTMVDRRMTLSQQVVADVRGH
                     FGDLVFGTTIPRNVRIAEAPSHGLPVLIYDNACAGAQAYILLASEFIRRRRTAAEPPS
                     EEVSHEPVS"
BASE COUNT          330 a          716 c          746 g          337 t
ORIGIN      
        1 gtcgatcgcg tgctggcgcg cttcgccaat accggcgccc agctcgtggt cgacattgcg
       61 gcggcgctca acgatgccaa ccggctcgcc gatgtcgcgc acaagctcaa gggcgcggcg
      121 cgcgccgccg gcgcgacccg actgggcgat ctcgcggcgg cgctcgaaca atccggcgac
      181 agggccgaca tcgcgccgct ggttaccgaa tggcagcggg ttgcccgcga gctcaacggg
      241 ccgccaggcg cctgaacctc gaccgcatcg ccatcttcgt catccacgca ccctgtcatc
      301 ccgaggccgc aggccgaggg acctttaagg gccacacgaa ggtgcctcgc tgctagcgcc
      361 gcgtcaggcg ctcgacgacc gtatcgagct gatcgaagtc gcggatctcg agcgtgagca
      421 ggctttgctc gcccaggccg cgcagcttga gctcggcttt gaggccgagc gcctcctcga
      481 tgcgtttctc gagcgcgcgg gtgtcggcgc ttttcgccgc ctcggcccgt ggggcgccgc
      541 ccttgctttt gcgcttgagg ctgccgctca ggcgctcgag gtcacgcacc gtgagctgct
      601 cctggagggc gcgctgcgcc atggcgaggg gatcgggcac gccgatcaac gcacgcgcct
      661 ggccggccga gagctggccg agacgaagca tctcctggac ggaagctggc agctccagaa
      721 gacgcaccgt gttggcgaca tgcgggcggc tcttgcccac cgttttggcg atgtcgtcgt
      781 ggctctggcc aaaatcctcc accagccggc gataggcctg cgcctcgtcg atcgccgtca
      841 ggtcggcgcg ctgcaggttt tcgatcaggc cgagttgcag ggcatcctgg tcgcccaggt
      901 tgcggacgac caccggtatg tcgtgcagct gcgcctgttg ggcggcccgc cagcgccgct
      961 cgccggcgac gatctcgtag gcatcggcct ggccggcgac cggccgcacc aggatgggct
     1021 gcaacagccc gaactccttc accgagtcga ccaaggcctc gaggtcctcg aacgtcgtgc
     1081 gcggctgcat cttgccgggc ctgagatggc cgatcggcag agtgaagggc gcgcggccgg
     1141 gcgcggcgat ggtcgctgcg tcccggccgg cagtatcggc cgctcgcggc acaaccgtgg
     1201 cggcaacgtc ttcgtcgccc aaaagggcgg acaggccgcg gcccaggccg cgcggtctag
     1261 gagactggct catgcgacac ctcttcggat ggcggttcgg ccgcagtgcg ccggcggcgg
     1321 atgaactcgc tcgccagcag gatataggcc tgcgcgccgg cgcaggcgtt gtcgtagatc
     1381 agtaccggca ggccatgcga cggcgcttcg gcgatgcgca cattgcgcgg gatcgtggtg
     1441 ccgaacacca gatcgccgaa atggccgcgc acgtcggcca cgacctgctg gctcaaggtc
     1501 atgcggcggt cgaccatggt caggatgact ccggcgatat gcaaccttgg gttgagacgc
     1561 ttcttgatcc tgtccacggt gctggcgagc gcgccgatgc cctcgagcgc caaaaactcg
     1621 gcctgcaccg gcaccagcac cgcatcgacg gcgaccaggg cgttcagcgt caccaggccg
     1681 agcgagggcg gacaatcgac caggatggtg gtccacggcg cgcgggcttc gctgtcgcgc
     1741 ggcccgagcg cgtcggccag gcgatgctcg cgacgctcca aatctatcaa ttcgatctcg
     1801 gcgccggaca gcgcgatcga cgccggcatc acgtgcaggc cggggatctg cgagggccgc
     1861 acgcagtccg ccaagggggc gaagcccagc aggaattcgt aggacccggg tgagcgctca
     1921 cttctagaga tcgccaaccc ggtcgaggca ttgccttgcg ggtcgaggtc gatcaacagg
     1981 acctgttcgc ccaccgcggc cagggcggtg gcgagattaa tcgcggtcgt ggtcttgccg
     2041 acgccgcctt tctggttggc gatcgcgaaa agctgtggtg cggtagggac cgattcgaag
     2101 gatgacggcg tcaaggtcgg tcacgctgt
//
LOCUS       DASWGA010000653         3571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1843922, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000653 DASWGA010000000
VERSION     DASWGA010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3571
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843922"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..348)
                     /locus_tag="VF991_15250"
                     /pseudo
     CDS             complement(1..348)
                     /locus_tag="VF991_15250"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
     gene            complement(361..609)
                     /locus_tag="VF991_15255"
     CDS             complement(361..609)
                     /locus_tag="VF991_15255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557850.1"
                     /translation="MSLEDKLVAMRAASANRIPPDRQAIMHRATEDLRKSGILDRITP
                     VGSPAPAFELANHDGRRVSSAKLLAAGPMVLSFFRGSW"
     gene            686..1123
                     /locus_tag="VF991_15260"
     CDS             686..1123
                     /locus_tag="VF991_15260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9557851.1"
                     /translation="MIEITPLRETDRPGWQPLAVGYNAFYERVLTDADYDRTWRRLMK
                     GEEMHGLAARLDGRVVGIAHYLFHTSIWLDDVCYLADLFVDETVRGQGAARALIEAVA
                     AAVSSRGCPRFYWLTKQDNARARILYDKVARFAGFIRYDHPMG"
     gene            complement(1157..2062)
                     /locus_tag="VF991_15265"
     CDS             complement(1157..2062)
                     /locus_tag="VF991_15265"
                     /inference="COORDINATES: protein motif:HMM:NF018420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HEX9557852.1"
                     /translation="MARLLRLAALVLLLALPANAQDKKEVDLALAMAIDISGSIDPDE
                     AKLQREGYVMAFRDPVVVKAILGGANGRIAVAYYEWSDAWVQRLLIDWTLLDSEASIA
                     AFANRLANAPISISRRTSISGAIRYAIPLFGRSPYETGRKVLDISGDGSNNDGGLVTD
                     QRHEALKERIVINGLPIMNDRPNPFGFPSEADLDKYYLACVTGGPRSFVEVARDFEDF
                     PRAVRKKLLQEVADLGPRHDFDIGGLGNLPHGTQLAQSGSGRRPVRSEDDYTKFVHPE
                     YELGCDVGERRSREFWQRRFGVTPD"
     gene            2187..3395
                     /locus_tag="VF991_15270"
     CDS             2187..3395
                     /locus_tag="VF991_15270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9557853.1"
                     /translation="MDLALSPQDEAFRGEVRRFLDDNLSDDLREAGRKTGGVFADIAA
                     GLRWHKVLAGRGWSAPTWPREYGGTGWSATQRYLFSRECAAVDAPRIFSMGIRMVGPV
                     IMKYGTPEQQAKYLPAIVSGDIVFCQGYSEPGSGSDLASLKTRAVRDGDDYVINGTKI
                     WTTGAHVADHMFCLVRTATEGKPQDGISFVLIDSMKTPGLSVAPILTLAGDHEVNQVF
                     FDNVRTPIANRIGPENAGWTVAKYLLEFERGGDAYTPNLYARIEDIRRIALEEAADGS
                     GRLLAERGFAQRLAEAEMEVQALEMIEMQVLSDLSRGKNPGAVSSAMKIRGSETLQKL
                     DHLGVEALAWYAAPFEPEARMLGHNEPTVTPEWGITAMPLYLNNRASTIYAGSNEIQR
                     NIIAKAVLGL"
BASE COUNT          593 a         1173 c         1221 g          584 t
ORIGIN      
        1 ctccgggcga tgcgtgtagt cgggatcggc ttcgaccgat cgcacgatcc cggcggggtc
       61 gatcacgaac cgcgccggca ccggcaggcg ccaggacgga tcgccgttgc ggacggcgag
      121 gtcgttgccg aagccgagat acactgcctt gagatcctcg ggcagggcga acgccaagcc
      181 gaatgcctcg gcgaccctcg actgctcgtc ccacaggatc gggaacgtga gcttctgctt
      241 ggccgccatc tccgccgtgc gttgcggcag ctcgggcgag atcacgacaa gcgaggcacc
      301 gaggcccgcg atgtcggcgg tgacgctttg cagagcctcc agctcatgcc ggcagtaggg
      361 tcaccacgat cctcgaaaga acgacaggac catcggcccg gcggcgagaa gtttggccga
      421 ggagacccgt cggccgtcat ggttggcgag ctcgaaggcc ggcgccgggc tgccgaccgg
      481 cgtgatgcgg tcgaggatgc cggacttgcg cagatcctcg gtcgcgcgat gcatgatcgc
      541 ttggcggtcc ggaggtatcc ggttggcgga tgcggcgcgc atcgccacca gcttgtcttc
      601 cagtgacatg gtttactcct tggtcaggcc gcttgcttga aaggccgggc ctgggctctg
      661 cgcgtttccc acgttacaag gcggcatgat cgaaatcacc ccgcttcgcg agaccgaccg
      721 gccgggctgg caaccgctcg cggtcggcta caacgccttt tatgaacggg tgctaaccga
      781 cgccgactat gaccggacgt ggcgccggct gatgaagggc gaggaaatgc atggcctcgc
      841 tgcccgtctc gatggccgcg tggtgggcat cgcacattac ctgttccaca ccagcatctg
      901 gctcgacgat gtctgctatc tcgccgacct gttcgtcgac gagacggtgc gcggccaggg
      961 cgcggcacga gcactgatcg aggcggtcgc ggcagcggtg agctcccgcg gctgcccgcg
     1021 cttctactgg ctgaccaagc aggacaatgc ccgcgcccgc atcctctatg acaaggtcgc
     1081 gcggttcgcg ggcttcatcc gctacgacca tccgatgggg taggccgctg ccggtggatg
     1141 cttggggctt gacccgtcag tccggcgtga cgccgaagcg gcgctgccag aactcgcggg
     1201 atcgccgctc gccgacgtcg cagccgagtt cgtattccgg atggacgaac ttggtgtagt
     1261 cgtcctcgct gcgcaccgga cgacggccgc tgccgctttg cgcgagttgc gtgccgtgcg
     1321 gcagattgcc gaggccgcca atatcgaagt catgccgcgg acccaggtcg gccacctcct
     1381 gcaaaagctt cttgcgcacg gcgcggggga agtcctcgaa atcgcgcgcg acttcgacga
     1441 acgagcgcgg gccgccggtg acacaagcca gatagtactt gtcgagatcg gcctcgctgg
     1501 ggaaaccgaa cggattgggc cggtcgttca tgatcggcag gccgttgatg acgatgcgct
     1561 ccttcagcgc ctcgtggcgc tggtcggtga ccagcccgcc gtcgttgttg gagccgtcgc
     1621 cagagatgtc gagcaccttg cgtccggtct cgtagggact gcggccgaac agcgggatgg
     1681 cgtagcggat ggcgccgctg atcgaggtcc gccgtgagat cgagatcggc gcattggcca
     1741 ggcggttggc gaaggccgcg atcgacgcct ccgaatcgag cagagtccag tcgatcagca
     1801 gccgctgcac ccaggcgtcc gaccattcgt aataggcgac ggcgatgcgg ccgttggcgc
     1861 cgcccaggat cgccttgacg accacagggt cgcggaacgc catgacgtag ccctcgcgct
     1921 gcagcttggc ctcgtcggga tcgatgctgc ccgagatatc gatggccatc gccagggcca
     1981 ggtcgacttc ctttttgtct tgtgcgtttg cgggaagcgc cagcaggaga acaagggcgg
     2041 cgagacgcag tagcctggcc atggtgacct ccgctatcgg gtgcgcgcga cgacgcaaga
     2101 agtgtaccgc tcgtcggaag ccaatgtcag ccgcgctctg gcggctggcg tccggcgccg
     2161 ctagcctttg gacaaaggag ccaaccatgg atctagcgct cagcccccag gacgaggcct
     2221 tccgcggcga ggtccgccgc ttcctcgacg acaatctgag cgacgatttg cgcgaagccg
     2281 gccgcaagac aggcggcgtg ttcgccgaca ttgcagccgg tctgcggtgg cacaaggtgc
     2341 tggctgggcg cggctggtcg gcgccgactt ggccccggga atatggcggc acgggctgga
     2401 gcgccaccca gcgctacctc ttctcgcgcg agtgcgcggc ggtcgatgcg ccgcgcatct
     2461 tcagcatggg catccgcatg gtcgggccgg tgatcatgaa gtacggcacc cccgagcagc
     2521 aggccaagta cctgccggcg atcgtgtcgg gcgacatcgt gttctgccag ggctactccg
     2581 agccgggatc gggctccgac ctcgccagcc tgaagacccg cgcggttcgc gacggcgacg
     2641 actacgtcat caacggcacc aagatctgga ccaccggcgc gcatgtcgcc gatcacatgt
     2701 tctgcctcgt gcgcaccgca accgagggca agccgcagga cggtatttcc ttcgtgctga
     2761 tcgattcgat gaagacgccc gggctcagcg tggcgccgat cctgaccctg gcgggcgacc
     2821 acgaggtcaa ccaggtgttc ttcgacaacg tgcgcacgcc gatcgccaac cgcatcggcc
     2881 cggagaatgc cggctggacg gtggccaagt acctgctcga gttcgagcgc ggcggcgatg
     2941 cctacacgcc caacctctac gcccgcatcg aggacatccg gcgcatcgcc ctcgaggaag
     3001 cggccgacgg ttcgggccgg ctgctcgcgg agcgcggctt tgcccaacgc ctggccgagg
     3061 ccgagatgga ggtgcaggcg ctggagatga tcgaaatgca ggtcctgtcc gacctcagcc
     3121 gcggcaagaa ccccggcgcc gtctcctcgg cgatgaagat ccgcggcagc gagaccttgc
     3181 agaagctcga ccatctcggc gtcgaggcgc tggcctggta cgccgcgccg ttcgagcctg
     3241 aggcgcgcat gctggggcac aatgagccca cggtgacgcc ggagtggggc atcaccgcca
     3301 tgccgctcta cctcaacaac cgggcttcga cgatctacgc cggctccaac gagatccagc
     3361 gcaacatcat cgccaaggcc gtgctgggct tgtgacgagc cgctgacggg aacacgtgcc
     3421 gccgcgaagc gttgctaggt catggatcgg cccatcctgc cgcggacgat catcggctac
     3481 gtgatccgca actcgggcgc ccaccagctg gggctcgcgg ccctgtcggc ggcggtgttc
     3541 gggctgagcg ccgtgccgct ggagctgcag c
//
LOCUS       DASWGA010000654         3676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1085037, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000654 DASWGA010000000
VERSION     DASWGA010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3676
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1085037"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="VF991_15275"
     CDS             complement(<1..482)
                     /locus_tag="VF991_15275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012710018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX9557854.1"
                     /translation="MNQRRQPRAPKRKTSQNPGLATFRRASPMRRSDTTGGNAGVLQQ
                     RPEFLALWDPTMASFNTIAGCVLASALFAMVVGKVSNAVVHPHKLDKPALAVADEAPT
                     ETAAAAPAAELPPIGPKLASANVENGKAIYMKQCFTCHTIDKGGPNKVGPNQWNVVGR
                     "
     gene            532..1416
                     /locus_tag="VF991_15280"
     CDS             532..1416
                     /locus_tag="VF991_15280"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEX9557855.1"
                     /translation="MAKALKASNTIAFQGEPGANSDMACRAAFPYMTTLPCPTFETAM
                     AAVQAGKAELAIIPVENSIAGRVADLHSLLPHTRLKIVAEHFQRVEHCLVALPGATLK
                     SIKTVKSHVQALAQCRNFLKKHHFAPLVHADTAGAAREIAEVRDQSVGAIASSLAARI
                     YDLKVLARNIEDADHNTTRMLVFSRHEAALDWRTVRCMSAFLFRVKSVPAALYKALGG
                     FATNGINIVKLESYLSGAHFEQAQFYAEVEGHPEQRGLQLALEELAFFSEEFKPLGTF
                     PANPFRRKGWEAPTRPGT"
     gene            1424..2086
                     /gene="rpe"
                     /locus_tag="VF991_15285"
     CDS             1424..2086
                     /gene="rpe"
                     /locus_tag="VF991_15285"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEX9557856.1"
                     /translation="MPQQPVRIAPSILSADFAALGREIEAVVEAGADWIHVDVMDNHF
                     VPNLTIGPLVVKALRKHSQRPFDVHLMVSPVDPLVPAFAEAGADVMSFHPEAGPHVHR
                     TIQLIKSLGKKAGAVLNPATPLAAIEQVLGDLDLVLVMSVNPGFGGQAFIESQLAKIA
                     ALRKAIDALGKAIDLEVDGGVNPETARHCIKAGADVLVAGTAVFSGGPNRYAANIKAL
                     RG"
     gene            2083..2583
                     /locus_tag="VF991_15290"
     CDS             2083..2583
                     /locus_tag="VF991_15290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557857.1"
                     /translation="MNVALQALAVARIEAGQGTPEQKARVIAWDRLHDMLSTLDSKTS
                     VLLRFNAIVVAALAYLVIVRASDPFAEANAVIKLLGSIIGHVSLLASVLSCGFAFPVI
                     NVEWEFFGGRLDRMAGGEPDFDDAALQRLGDLVARRTRLYWRAWQFAVAGGTGFAILV
                     GLATLH"
     gene            2586..3509
                     /locus_tag="VF991_15295"
     CDS             2586..3509
                     /locus_tag="VF991_15295"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9557858.1"
                     /translation="MSDLILHHYPNSPFSEKVRIAFGIKQLAWRSVQIPVIMPKPDLM
                     PLTGGYRKTPVLQVGADIYCDTQLIMLELEKRAPRPPLLPTNGAGEARALAMWVDRNV
                     FWSAVGVVMGAIGDRLPEAFHKDRSAFSGRPFDVARLKEMAPFAADQTYAQLVLAEEM
                     LADGRSYLMGAVPTLADCALYNPVWFLKERLGAGKAVPPLDRLPKIVAWSERMKAFGN
                     GAPSDMAPAEALDVAKAATPALAQVDANDPSGLTAGQAISVTPDDTGKVPVTGILVGL
                     APDRISIRRSDPRVGDVVVHFPRAGYVVSRL"
BASE COUNT          608 a         1233 c         1197 g          638 t
ORIGIN      
        1 ttgcggccga cgacgttcca ctggttcggc ccgaccttgt tcggtccgcc cttgtcgatg
       61 gtgtggcagg tgaagcactg cttcatgtag atcgccttgc cgttctcgac attggcgctg
      121 gcgagcttcg gcccgatcgg cggcaattcc gcggccggag cggcggcagc ggtctcggtc
      181 ggcgcttcat cggcgacagc cagcgcgggc ttgtccagct tgtgcggatg gaccacggcg
      241 ttggagacct tgcccaccac catcgcaaaa agggccgagg ccagaacgca gcccgcaatc
      301 gtgttgaaac tggccatagt cggatcccag agcgccaaaa attccggccg ttgctgtagc
      361 acgccggcat tgccgccagt agtatccgat cgccgcatcg ggcttgcgcg gcggaacgtc
      421 gcaagtcccg gattttgcga ggtttttcgc ttaggcgcgc gcggttgacg gcgctggttc
      481 aacgggcgaa acagcctgca cacaagacgt gagcgtgggg gagttcagga gatggcgaag
      541 gcgctgaagg cctccaacac gatcgccttt cagggcgagc ccggcgccaa ttccgacatg
      601 gcctgtcgtg cggcctttcc ctacatgacg acgctgccct gcccgacctt cgaaacggcg
      661 atggccgccg ttcaggcggg caaggccgaa ctcgccatca tcccggtcga gaactcgatc
      721 gcggggcgcg tcgccgatct gcacagcctg ctgccgcata ccaggctgaa aatcgtcgcc
      781 gagcatttcc agcgcgtcga gcactgccta gtcgctctgc ctggcgccac gctgaagagc
      841 atcaagacgg tgaaaagcca tgtccaggcg ctggcgcagt gccgcaactt cctgaagaag
      901 caccacttcg cgccgctggt gcacgccgac acggcgggtg cggcgcgcga gatcgctgag
      961 gttcgcgacc aaagcgtcgg cgccattgct tcctcgctgg cggcgcgcat ctacgatctc
     1021 aaagtgctgg cgcgcaatat cgaggatgcc gatcacaaca ccacgcgcat gctggtgttc
     1081 tcgcgccatg aggcggcgtt ggactggcgc acggtgcgct gcatgagcgc cttcctgttc
     1141 cgggtgaaga gcgtgccggc ggcgctctac aaggcgctgg gcggcttcgc caccaacggc
     1201 atcaacatcg tgaagctgga aagctatctc tccggcgcgc atttcgagca ggcgcagttc
     1261 tatgccgagg tcgagggcca tcccgagcag cgcggcctcc agctcgcgct cgaggaactc
     1321 gcctttttct ccgaggagtt caagccgctc ggcacctttc cggccaatcc cttccggcgc
     1381 aaaggctggg aagcgccgac gcggccgggc acctgaggcc gccatgccgc aacagccggt
     1441 ccgcatcgct ccttccatcc tgtcggccga ttttgcagcc cttggccgcg agatcgaggc
     1501 ggtcgtggaa gcgggcgccg actggatcca tgtcgacgtg atggacaacc acttcgtgcc
     1561 caacctaacc atcgggccgc tggtggtgaa ggcgctgcgc aagcacagcc aaaggccgtt
     1621 cgacgtgcat ctcatggtct cgccggtcga cccgctggtg ccggccttcg ccgaggccgg
     1681 cgccgacgtg atgtcctttc accccgaggc gggaccgcat gttcaccgca ccatccagct
     1741 catcaagagc ctgggcaaga aggcgggcgc ggtgctcaat ccggcgacac cgcttgccgc
     1801 catcgagcag gtcctgggcg atctcgacct cgtgctggtg atgagcgtca atccgggctt
     1861 tggcggtcag gccttcatcg agagccagct cgccaagatc gccgccctgc gcaaggcgat
     1921 cgatgctctg ggcaaggcga tcgacctcga agtcgatggc ggcgtcaatc ccgagaccgc
     1981 acgacactgc atcaaggccg gcgccgacgt cctggtggcc ggcaccgcgg tgttcagcgg
     2041 cggacccaac cgctacgccg ccaacatcaa ggcgctgcgc ggatgaacgt ggcgctccag
     2101 gctctggcgg tcgcgcgcat cgaggccggc cagggaacgc ccgagcaaaa ggcgagggtg
     2161 atagcgtggg atcggctcca cgacatgctg tccacgctcg attccaagac ctccgtgctt
     2221 ctgcgcttca acgccatcgt agtggcagcg cttgcctatc tcgtgatcgt ccgcgcttcc
     2281 gacccgtttg ccgaagccaa tgccgtcatc aagcttctgg gaagcatcat cggccatgtg
     2341 agcctgctcg ccagcgtgct gagttgcggt ttcgcctttc cggtgatcaa cgtcgaatgg
     2401 gagtttttcg gcggccggct ggaccgtatg gcgggcggcg agcccgactt cgacgatgcc
     2461 gccttgcaac ggttgggcga cctggttgcg cggcgcaccc ggctctattg gcgggcttgg
     2521 cagttcgccg tggcgggtgg aaccggcttt gcaattctgg tcggcctcgc cacactccac
     2581 tgaccatgtc cgacctcatc ctccaccact acccgaactc gcccttctcc gagaaggtgc
     2641 gcatcgcctt cggcatcaag cagctcgcct ggaggtcggt gcagatcccg gtgatcatgc
     2701 ccaagcccga cttgatgccg ctcaccggcg gctatcgcaa gacgccggtg ctgcaggtcg
     2761 gcgccgacat ctattgcgac acccagctca tcatgctcga gctggaaaag cgcgcgccgc
     2821 ggccgccgct gctgccaacc aacggggcag gcgaggcgcg ggcgctcgcc atgtgggtcg
     2881 atcgcaacgt cttttggtct gccgtcggcg tggtgatggg tgccatcggc gacaggttgc
     2941 ccgaggcctt ccacaaggac cgcagcgcct tctccggccg gccgttcgac gtcgccaggc
     3001 tcaaggagat ggcgcccttc gcggccgacc agacctatgc ccagctggtt ctggccgagg
     3061 agatgctggc tgacggccgg tcgtatctga tgggcgcggt gccgacgctg gccgactgcg
     3121 cgctctacaa tccggtgtgg ttcctcaagg aacggctggg cgcgggcaag gccgtgccgc
     3181 cgctcgaccg gctgcccaag atcgtcgcct ggtcggaacg gatgaaagcg ttcggcaacg
     3241 gcgcgcccag cgacatggcg ccggccgaag cgcttgacgt cgccaaggca gcgacgccgg
     3301 ctctcgccca ggtcgacgcc aacgatccga gcggattgac agcgggtcag gcgatcagcg
     3361 tcacgccgga cgacaccggc aaagtaccgg tgacgggcat tctggttggt ctcgcaccgg
     3421 accgtatttc tattcggcgc agcgatccgc gggtcggcga cgtggtcgtc catttcccgc
     3481 gcgccggcta cgtcgtcagc cgtctatagc gatatctcgc cgttcagcac cgcgacgcag
     3541 ccgccgccca cggtggccca gacgccgtcg ccgccgcgcc gtgccgagca ggcgaggagg
     3601 ctcggccgac ctatctcgac accctgcgtg atgtcgtagc gctgctcgga gcccttcgcg
     3661 agcgacagca ggagag
//
LOCUS       DASWGA010000655         2190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1600620, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000655 DASWGA010000000
VERSION     DASWGA010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600620"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1065)
                     /locus_tag="VF991_15300"
     CDS             complement(<1..1065)
                     /locus_tag="VF991_15300"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEX9557859.1"
                     /translation="MASRPPFVVEDQSEVIDFLTAHLRPQRRIDTHGAVVFLAGERAY
                     KLKRAVKFPYMDFSTVDRRAAMCAAEIEINRRLAPEIYLGTAPVRRGSDGRLALGEVG
                     EPGDDAADWLVVMRRFDEEGLFDRMADRGALTPEMMAALGARIANYHDGLTPIAGFSG
                     PEDYGRSVAADIRQMREQGDRLDPPTTEALGVALPGALEPFVNLVARRAAAGAVRRCH
                     GDLHLRNIVLIAGKPVPFDAIEFSERIANIDVLYDLSFALMDLCERRLGPLANRLLNE
                     WLWRIAELADAPHEEALALLPMFLSRRASIRAFVDAQAAAVSGADTSRARDYQKVALS
                     FLRPAPPRLVAIGGLSGSGKT"
     gene            complement(1070..1966)
                     /locus_tag="VF991_15305"
     CDS             complement(1070..1966)
                     /locus_tag="VF991_15305"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX9557860.1"
                     /translation="MAFEPQRLMRLATIASMLVAAILIVAKVAAWWITDSISMLSSLI
                     DTSLDLVGSLVTFFAVRQALIPADADHRFGHGKAEALAGLVQAGFIAASGGALLLAVG
                     ERLINPHQVREEQIGLAISVLAVVLTIALVSFQRHVVKRSGSIAIDADMAHYTTDLVA
                     TIVTGVGLYLSGTLDEPLIDSGVAGLVALYLIHGAWQVGRKSLDVLMDRELPDEERKR
                     IRDIVRSHPEVRGVHELRTRSAGLTKFIQLHVVLDPTMPLGNAHVVGDRIEAMLRKAF
                     PQAEIILHVDGWDDREAPPPAA"
     gene            complement(1974..>2190)
                     /locus_tag="VF991_15310"
     CDS             complement(1974..>2190)
                     /locus_tag="VF991_15310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate oxidase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9557861.1"
                     /translation="LESRFALEKRVAAVAAKHVIGTVPRPPHWSGFRLQPLLIEFWQD
                     AAFRLHDRLEYRRVAPGEPWTTRTLYP"
BASE COUNT          372 a          754 c          751 g          313 t
ORIGIN      
        1 ggtcttgccg ctgcccgaca ggccgccgat tgccaccagc cgcggcggcg cgggtcgcag
       61 gaaggacagc gccaccttct ggtagtcgcg ggcgcgcgac gtatcggcac cgctcaccgc
      121 cgccgcctgg gcatcgacga aggcgcggat cgaggcgcgc cgcgacagga acatcggcaa
      181 cagggcgagt gcctcctcgt gcggggcgtc ggccaactcg gcgatgcgcc acagccactc
      241 gttcagcagg cggttggcca gcggcccgag cctgcgctcg caaaggtcca tcagggcgaa
      301 cgacaggtcg tagagcacgt cgatattggc gatgcgctcg gagaactcga tggcgtcgaa
      361 cggcaccggc ttgccggcga tcagtacgat gttgcgcaag tgcaggtcgc catggcagcg
      421 ccgcacggcg cccgcagccg cgcgccgcgc caccaagttg acgaacggct ccagcgcgcc
      481 gggcagggcc acgcccagcg cctcggtggt cggtgggtcc aaccggtcgc cctgctcgcg
      541 catctggcgt atgtcggcgg ccactgaccg gccatagtcc tcgggcccgg agaagccggc
      601 gatcggggtc aagccgtcgt ggtagttggc gatccgcgct ccgagtgccg ccatcatttc
      661 cggcgtcaga gcgccgcggt cggccatgcg gtcgaacagg ccctcctcgt cgaagcggcg
      721 catgacgacc agccagtcgg ctgcgtcgtc gcccggctcg cccacctcgc ccaacgccag
      781 cctgccgtcg cttccgcgcc gcaccggcgc cgtgccgaga tagatctccg gcgccagccg
      841 gcggttgatc tcgatctcgg cggcgcacat ggcggcccgc cgatcgaccg tcgagaaatc
      901 catgtaaggg aacttcaccg cccgcttcag cttgtaggcg cgctcgccgg ccaggaacac
      961 gacggcgccg tgcgtgtcga tgcggcgttg gggccgcaga tgcgccgtga gaaagtcgat
     1021 gacctcgctc tggtcctcga ccacgaacgg aggtcggctg gccatcgcgt caggccgccg
     1081 gcggaggcgc ttcgcgatcg tcccagccgt cgacatgcag gatgatctcg gcctggggaa
     1141 aagccttgcg cagcatggcc tcgatacggt cgccgacgac gtgggcattg cccagcggca
     1201 tcgtcgggtc gagcacgaca tggagctgga tgaacttggt gaggcccgcc gagcgcgtgc
     1261 gcagctcgtg cacgccgcgc acttcgggat ggctgcgcac gatgtcgcgg atccgcttgc
     1321 gctcctcgtc cggcagctcg cggtccatca gcacgtcgag cgacttgcga ccgacctgcc
     1381 aggcgccatg gatgagataa agcgccacca gtcccgcaac gccgctgtcg atcagtggct
     1441 cgtcgagcgt gccggagaga tacaatccga ctccggtgac gatggtcgcc accaagtcgg
     1501 tcgtgtaatg cgccatgtcg gcgtcgatgg cgatcgaacc ggaccgcttc acgacatgac
     1561 gctggaacga cacgagggcg atggtgagca cgaccgcgag cacgctgatc gccaggccga
     1621 tctgctcttc gcgcacctgg tgcggattga tcagccgctc gccgaccgcc agcagcaacg
     1681 cgccgcccga cgccgcaatg aaacccgcct ggaccaggcc ggccaaggcc tccgccttgc
     1741 cgtggccaaa gcgatggtcg gcatcggccg ggatcaacgc ctgacggacg gcgaagaacg
     1801 tgaccaggga gcccacgaga tcgagcgatg tgtcgatcag ggacgacagc atgctgatcg
     1861 agtcggtgat ccaccaggcc gccaccttgg cgacgatcag gatcgccgcc accagcatcg
     1921 aggcgatggt ggccagccgc atcaggcgct ggggttcgaa cgccatcgtc gcctcagggg
     1981 tagagggtgc gcgtcgtcca gggctcgccc ggcgcgacac ggcggtattc caggcggtcg
     2041 tgcaggcgaa acgcggcatc ctgccagaat tcgatcaaca agggctgcag gcggaatccc
     2101 gaccagtgcg gcggacgcgg caccgtgccg atgacatgct tggccgcgac cgcggccaca
     2161 cgcttttcca gggcaaaacg gctctccagc
//
LOCUS       DASWGA010000656         4055 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2352334, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000656 DASWGA010000000
VERSION     DASWGA010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4055
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2352334"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..924
                     /locus_tag="VF991_15315"
     CDS             109..924
                     /locus_tag="VF991_15315"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9557862.1"
                     /translation="MMQTLDVGQATFSYLDQGRGTAVVLLHGIGSAARSFDRQIGDLS
                     PRHRVVAWDAPGYGSSTALAPASPTAGDYAVALAGFLDALGVDACHLLGHSLGCLMAA
                     RFAVLHPERVLSLTLCSIAGGHATLPAEERQRLLDQRLGDIASLGPRGMAEQRAPRLL
                     GPTAAPDALERLIDTMASVRPDGYGQAARMLSTADIKADVGKFPASLPGQIIYGDADA
                     ITPPARNQDIAAIWPAAAVHVIPGTGHALYLEQPELFNSILSHFIAKSEGTRR"
     gene            921..1883
                     /locus_tag="VF991_15320"
     CDS             921..1883
                     /locus_tag="VF991_15320"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9557863.1"
                     /translation="MKRRTLLALPSLLVARAHAQARYPSMPIHIVVSVSAGGSIDTIA
                     RSIGEALSQRIGQPVVIENRPGANGNIAAASVARAAPDGYTLLATGGSTLNLNPFLYR
                     ELPFDPVKSFAPITLTARTNFILVVHPKLGVESVEAFVALAKAHPKTLNYGSAGSGSL
                     IHIATELFNTTAGIETNHVPYKGLAPAVNDLLAGQIDFMFDSATTMSHIQAGRLKALS
                     VIGPNPLPALPQLKTLADHGIEGVDVASGWHALFAPAGTPAEIIDRLAALWQPILASA
                     AIRDRIVALGAEPASCTPDQLAQILVKDLERLQPIVQRTGARLD"
     gene            complement(1994..>4055)
                     /locus_tag="VF991_15325"
     CDS             complement(1994..>4055)
                     /locus_tag="VF991_15325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HEX9557864.1"
                     /translation="GAGYTDLHIRLPVLWFLVGLAAICALASWLNVRWRTWRIPAGAL
                     ALLFGSSFVFYLLVPAFFQRLYVKPSELALETPYIERNIALTRQAYNLQQIEVKLFPV
                     EEGLSFASLEANRPTIDNIRLWDVQPLMDTYAQLQEIRTYYKFLDIDIDRYRLGGTYQ
                     QVMLSARELEPALLPPNAQTWVNLHLLFTHGNGMVMSPVTQKSTEGLPTFYLQDIPPV
                     ANGGPAIREPRLYFGQASERYAIVKGTTPEFDYPKGKDNVYASYDGADGVSLGDPAWR
                     SLFSWYYGDPNILLSGYITNDSRILLHRNIQDRVRTIAPVLRLDHDPYIVASGGRLFW
                     MQDAYTTSEWFPYAQPQSSGGFNYMRNSVKVVIDAYQGSVDFYVSDPGDPLIQTYQRI
                     FPGLFKPLAAMPPDLQQHIRYPEDLFLVQAQLYRAYHMDTAEVFYNREDLWQFPRQLA
                     GIGDSAASTGPMGGIGRDVPRMAPYYMVIRLPGEARAEFVLMLPMVPSQRDNMIAWLA
                     ARCDPPDYGKVVIYEFPKDKQVYGPFQIEARIQQNTDISQQISLWNQMGSRVIRGHLQ
                     VVPIENSILYVSPLYLRAATGQLPELKRVIAAYGDRVVMEETLGAALAALFKDTVLPP
                     ARPADAGAARSAGPPDARAREALAHYDRALERLKAGDWSGFGAELDALRPLLETLGRP
                     TDSR"
BASE COUNT          647 a         1354 c         1374 g          680 t
ORIGIN      
        1 tccagccggc cggccgcact acttccgcaa cgacggcgtg gccgacgctg agttcaccat
       61 ggtggtgggc tcgcccaagc cggagacgat cacgttcgac gccgcgtgat gatgcagacg
      121 ctcgacgtcg gccaggcgac gttcagctat ctcgaccagg gccgcggtac ggccgtggtg
      181 ttgctgcacg gcatcggctc ggcagcgcgc tcgttcgatc gccagatcgg ggatctctcg
      241 ccgcgccatc gggtggtggc gtgggatgcg ccgggctacg gcagctccac cgccttggct
      301 ccggccagtc cgacggccgg cgactatgcg gtggcgctgg cgggattttt ggacgcgctc
      361 ggcgttgacg cctgtcatct gctcggccat tcgctcggtt gcctgatggc cgcgcgcttt
      421 gcggtgcttc atccagagcg cgtcctgtcg ttgaccctgt gcagcatcgc cggcggccat
      481 gccaccctgc cagccgagga gcggcaaagg ctcctcgatc agcggctggg cgacatcgcc
      541 tcgctggggc ctcgcgggat ggccgagcaa cgggcgccgc ggctgctcgg accgacggcg
      601 gcacctgacg cgctggaacg gctgatcgac accatggcgt ccgttcgacc cgacggttat
      661 ggccaggcgg cgcgcatgct gtcgacggcc gacatcaagg ccgatgttgg caagttcccg
      721 gccagcctgc cgggccagat catctacggc gatgccgacg cgatcacgcc accggcgcgc
      781 aaccaggaca tcgcggcgat ctggccggcg gcggccgtcc atgtgatccc cggcaccggc
      841 cacgcgctct atctcgagca gcccgagctg ttcaattcca tcctgagcca tttcatcgcc
      901 aagagtgagg gaacccgtcg atgaaacgcc gcacgctgct ggcacttcct tcgcttcttg
      961 tcgcgcgcgc ccacgcccag gcccggtacc cgtccatgcc gattcacatc gtggtgtcgg
     1021 tctcggccgg cggctcgatc gacaccatcg cccgctcgat cggcgaggcg ctgtcgcagc
     1081 gcatcggcca gcccgtcgtg atcgagaacc gacccggcgc caatggcaac atcgccgccg
     1141 cctcagtcgc gcgcgccgcg ccggacggct acacgctcct ggccaccggc ggcagcacgc
     1201 tcaacctcaa tcctttcctc taccgcgagc tgccgttcga tccggttaaa agcttcgcgc
     1261 cgatcacgct gacggcgcgc accaacttca tcctcgtcgt ccatcccaag ctcggggtcg
     1321 aatccgttga agcgttcgtc gccctcgcca aggcgcatcc caagacgctc aactacgggt
     1381 cggcaggcag cggcagcctg atccacatcg ccaccgagct gttcaacacg acggcgggca
     1441 tcgaaaccaa ccacgtgccc tacaaggggc tggcgcccgc ggtgaacgac ttgctggccg
     1501 gccagatcga cttcatgttc gattcggcca cgacgatgtc gcacatccag gccggacggc
     1561 tgaaggccct gtccgtgatc ggcccgaacc cgctgccggc cttgccgcag ctcaagacgc
     1621 tggcggatca tggcattgag ggcgtggacg tggcgtccgg ctggcacgcc ctgtttgcgc
     1681 ccgccgggac gccggccgag atcatcgacc ggttggccgc cctctggcag cccatcctcg
     1741 cttcagcagc catccgtgat cgaatcgttg cgctgggtgc cgagccggct tcctgtacgc
     1801 ccgaccagct cgcgcagatc ctggtcaagg atctcgagcg gctgcagccc atcgtccaac
     1861 gcaccggcgc ccggctcgac tgaacccgag tcgacctgtc attcgatcac ctcgtcggcc
     1921 gtgtccgcgc cgccgtcatt gcgctgtcat tccacggccg ccgctttcgc caggcgtccc
     1981 ggcgccgcca tcgctaacgg ctgtcggttg ggcggccgag tgtctcgagg agcgggcgga
     2041 gcgcgtcaag ctccgcgccg aagccgctcc agtctcccgc cttcaggcgc tcgagggcgc
     2101 ggtcataatg ggcgagcgcc tcgcgggcgc gcgcatccgg tgggccggcg ctcctcgccg
     2161 cacccgcatc ggcgggacgg gccggcggca agacggtgtc cttgaacagc gcggccagcg
     2221 cggcgcccag cgtttcctcc atcaccacgc gatcgccgta ggccgcgatt acgcgcttga
     2281 gctcgggcag ctggccggtc gcggcgcgca ggtagagcgg cgacacatag aggatcgagt
     2341 tctcgatcgg cacgacctgg agatggccgc ggatgacgcg cgagcccatc tggttccaca
     2401 gcgagatctg ctgcgagatg tcggtgttct gctggatccg cgcctcgatc tggaaggggc
     2461 cgtagacctg cttgtccttg gggaattcgt agatgacgac cttgccgtag tcgggcggat
     2521 cgcagcgcgc cgccagccag gcgatcatgt tgtcgcgctg gctcggcacc atcggcagca
     2581 tgagcacgaa ttcggcgcgc gcctcgccgg gcagccgaat gaccatgtag taaggcgcca
     2641 tgcgcggcac gtcgcggccg atgccgccca tcgggccggt gctggcggcg ctgtcgccga
     2701 tgccggcgag ctggcgcggg aactgccaga gatcctcgcg gttgtagaac acctcggccg
     2761 tgtccatgtg ataggcgcgg tagagctgcg cctggacgag gaagagatcc tcggggtagc
     2821 ggatgtgctg ctgcaggtcc ggcggcatcg ccgccagcgg cttgaagagg cccgggaaaa
     2881 tgcgttggta ggtctggatc agcggatcgc cgggatcgct gacatagaag tccaccgagc
     2941 cctgataggc gtcgatcacc accttgaccg agtttcgcat gtagttgaag ccgccggagg
     3001 attgcggctg ggcatagggg aaccactcgc tggtggtgta ggcgtcctgc atccagaaca
     3061 gccgcccgcc gctcgccacg atatagggat catggtcgag gcgcaggacg ggggcgatcg
     3121 tgcgcacccg gtcctggatg ttgcgatgaa gcaggatccg gctgtcgttg gtgatgtagc
     3181 cgctcagcag gatgttggga tcgccgtagt accaggagaa caggctgcgc caggccgggt
     3241 cgccgaggga gacgccgtcg gcgccgtcgt aggacgcgta gacgttgtcc ttgcccttgg
     3301 gatagtcgaa ctcgggcgtc gtgcccttga cgatcgcgta gcgttcgctg gcctggccga
     3361 aatagaggcg cggctcgcgg atggcgggac cgccgttggc gaccggcggg atgtcctgca
     3421 ggtagaaggt cggcaagcct tcggtggatt tctgcgtcac cggcgacatc accatgccgt
     3481 tgccgtgggt gaacagcaga tgcaggttga cccaggtctg cgcattgggc ggcagcagcg
     3541 ccggctcgag ctcgcgcgcc gacagcatca cctgctgata ggtgccgccc agccgatagc
     3601 ggtcgatatc gatgtcgaga aacttgtagt aggtcctgat ctcctgcagc tgggcgtagg
     3661 tgtccatcag cggctgcacg tcccacaggc ggatgttgtc gatggtcggg cggttggcct
     3721 cgagcgaggc gaagctcagg ccctcctcga ccgggaaaag cttcacctcg atctgctgca
     3781 ggttgtaggc ctgccgcgtc aacgcaatgt tgcgctcgat atagggcgtc tccagcgcca
     3841 gttcgctcgg cttcacatag aggcgctgga agaatgccgg gaccagcagg tagaagacga
     3901 acgagctgcc gaacagcagc gccagcgccc ctgcggggat ccgccaggtc cgccaacgca
     3961 cattgagcca tgaggcgagg gcgcaaatgg cggccagtcc gacgaggaac cacagcaccg
     4021 gcagccggat gtggaggtcg gtgtagccgg cgccg
//
LOCUS       DASWGA010000657         2453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2352335, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000657 DASWGA010000000
VERSION     DASWGA010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2352335"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            378..1715
                     /locus_tag="VF991_15330"
     CDS             378..1715
                     /locus_tag="VF991_15330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9557865.1"
                     /translation="MRKSKLTRRRFLATTAASTAVIAMPHVRGAYAAGKLSIGFWDHW
                     VPGANNASKTLCEEWGAKEKVAVSIDYITSQGNKNMLTIAAEAQARSGHDILAFPSWQ
                     PHDHANRLEPVDDIMGELIKLNGAVNPTVEYLGRANGRWTAVPACVGSQIKGPCSRID
                     LMKQLAGIDVQALYPAGSPPKAEAWTLDAFLKAAEACHKGGHPFGIGLGVTEDNVDTA
                     GAIFQSFGAHLVDAKGNVAVKSDPVRQALDYYKKLAQWLPPDAPAWDNASNNKYLISG
                     KGALIMNPPSAWAVAKRDAPQVAEQCWTHGMPSGPKGRYAPFIPYFWGIWNFGKNKSA
                     AKSLLVHLSQPSAVEKMVEASGGYDLPAFEKLTTFKIWAEEGPPKGTLYHYPNPHNHQ
                     ILSVAAQPAPPKIAVQIYTQAILTKMVVRFMQGEALENTLAWAESEVEGFMRT"
     gene            1824..>2453
                     /locus_tag="VF991_15335"
     CDS             1824..>2453
                     /locus_tag="VF991_15335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9557866.1"
                     /translation="MVDAALEAPSIARGIRRRSTLRRAMGRRSTIAFLMTLPLILLVA
                     LLVLYPAVYSIHLATLNKSMERFVGFGNFLFLFKRETFWMVVRQSCIFAITAVVFKAL
                     IGFIVAHLVHNVPSRGQRKWRGMLLVPWVIPPAMSCLAWLWLFDPSYSAFNWILDKLG
                     AEPVPWTGDAYWARFSVILVNVWIGAPFFMIMYLAALKSVPEQLYEAAAI"
BASE COUNT          421 a          838 c          775 g          419 t
ORIGIN      
        1 cgctgcgctc gttcctcaag agcggcggct cggcgttctg cctgacgctc cggctcgacc
       61 ggcggtcgct cgcgcccgcc gccgtccggc gcgccgccgt ggcgtgatgc agcgtttcac
      121 caccaccgtc gtccccgcgc atgcggggga cccagtaatc aacgcctctg ggatactggg
      181 tccccgcttt cgcggggacg acggcggagg ataacgcgtc cggcgtgcgt catctgcgcg
      241 cgaaatctcc ccctgacaac cgcagcgaat ttgatctaag cttccagccg gacgtgaagc
      301 cgaatcggcc accgccctta tcctgacggc tgcgacaagg ccggcggcgt ccgcgcggga
      361 acccatggga ggactgcatg cgcaagagca agctgacgcg acgccgtttc ctggcaacga
      421 cggccgcctc gaccgccgtc atcgcgatgc cgcacgtgcg cggcgcctac gccgccggca
      481 agctgtcgat cggcttctgg gatcactggg tgccgggggc gaacaacgcg tccaaaacct
      541 tgtgcgagga atggggcgcc aaggagaaag tcgcggtctc gatcgactac atcacctccc
      601 agggcaacaa gaacatgctg accatcgccg ccgaggcgca ggcccggtcg ggtcacgaca
      661 tattggcgtt tccgagctgg caaccacacg accatgccaa tcgcctggag ccggtcgatg
      721 acatcatggg cgagctgatc aagctcaacg gcgccgtcaa cccgaccgtc gaatacctgg
      781 gccgggccaa tggccggtgg actgccgtgc ccgcctgcgt cggcagccag attaagggcc
      841 cgtgctcgcg catcgacctg atgaagcagc tcgccggcat cgacgtgcag gcgctctatc
      901 cggccggcag cccgccgaag gcggaggcct ggacgctcga cgcgttcctc aaggccgccg
      961 aagcctgcca caagggcggt catcccttcg gcatcggtct cggcgtgacc gaagacaacg
     1021 tcgacaccgc cggcgcgatc ttccaatcct tcggcgctca cctggtcgat gccaagggca
     1081 acgtcgccgt caagtcggac ccggtgcgcc aggcgctcga ctattacaag aagctcgcgc
     1141 aatggctgcc gccggacgcc ccggcctggg acaacgcgtc caataacaag tatctgatct
     1201 cgggcaaagg cgcattgatc atgaatccgc cgagcgcctg ggcggtcgcc aagcgcgacg
     1261 cgccgcaggt ggccgagcaa tgctggaccc acggtatgcc ctccggcccg aagggccgtt
     1321 acgcaccgtt catcccctac ttctggggca tctggaactt cggcaagaac aagtccgcgg
     1381 ccaagagcct gctcgtccac ctctcgcagc catcggccgt cgagaagatg gtggaagcga
     1441 gcggcggcta cgacctgccc gcgttcgaaa agctcacgac cttcaagatc tgggcggagg
     1501 aagggccgcc gaagggcacg ctctatcact atcccaaccc gcacaatcac cagattctct
     1561 cggtcgcggc gcagcccgcg ccgccgaaga tcgccgtgca gatctatacc caggcgatcc
     1621 tcaccaagat ggtggtgcgg ttcatgcagg gcgaagcctt ggaaaacacg ctcgcctggg
     1681 cggaatccga ggtcgaagga ttcatgcgga cctgaacttg cgctcgcggc gccgccgcgc
     1741 gcgggagcgg gtgactccgc cgggtgacgt cacccgctgc cgctgaccgg agggctcatc
     1801 gcttcatctt atcgaggact cgaatggtcg acgcggcatt ggaagcgcca tcgattgccc
     1861 gcggcatccg ccgacgctcg acgctgcggc gggcgatggg gcggcggtcg accatcgcct
     1921 tcctgatgac gctgccgctg atcctgctag tcgcgctgct ggtgctctat cccgccgtct
     1981 attcgatcca tctcgcgacg ctgaacaagt cgatggagcg attcgtcggc ttcggcaatt
     2041 ttttgttcct gttcaagcgc gagacgttct ggatggtggt gcggcagtcc tgcatcttcg
     2101 ccatcaccgc cgtcgtgttc aaggcgctga tcggcttcat cgtcgcgcat ctcgtgcaca
     2161 acgttccgag ccgcggccag cgcaagtggc gcggcatgct gctggtgccg tgggtcattc
     2221 cgccggcgat gagctgcctc gcctggctgt ggctgttcga tccgtcctac agcgccttca
     2281 actggatcct cgacaagctc ggcgccgagc cggtgccatg gaccggcgac gcctattggg
     2341 cgcgcttctc ggtcatcctg gtgaacgtct ggatcggcgc gccgttcttc atgatcatgt
     2401 acctggccgc gctgaaatcg gttcccgagc agctctacga ggccgccgcg atc
//
LOCUS       DASWGA010000658         3769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_448981, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000658 DASWGA010000000
VERSION     DASWGA010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3769
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448981"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..726)
                     /gene="hisB"
                     /locus_tag="VF991_15340"
     CDS             complement(52..726)
                     /gene="hisB"
                     /locus_tag="VF991_15340"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013217300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEX9557867.1"
                     /translation="MARQASITAARKATPKAAKGNILTTPGTGGRRAFVSRATKETRI
                     AAAINLDGTGKYDIKTGIGFLDHMLEQLSRHSLIDITLRAEGDLHIDYHHTTEDSGIV
                     LGECLAKALGERTGIRRYGAAHIPMDETLTEVALDASNRPYLIWKVVFSKPKLGTMDT
                     ELFKEWFQAFAQLGGLTLHVWNHYGDNNHHIVESCFKGLARALRVAVEIDPRQTAAVP
                     STKGVL"
     gene            complement(811..2079)
                     /locus_tag="VF991_15345"
     CDS             complement(811..2079)
                     /locus_tag="VF991_15345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9557868.1"
                     /translation="MDFDIPADISAYLHELDAFIEREIRPLERENDNIRFFDYRREHA
                     RTDWDNDGQPRHEWEALLAEMRRRADKAGHLRYGLPKELGGKEGSNLAMAIIREHLAH
                     KGLGLHNDLQNESSIVGNFPVALLLHRFGTQEQKQRYLEGMLTGKERIAFGLTEPNHG
                     SDATFMETTATRQGSDWVINGMKRFNTGMHTATVDLVFARTSGKAGDARGISAFLTPV
                     TSPGFKVEHMWWTFNMPSDHAEVSLTNVKVPASTMLGEEGRGLDVAQTFVHENRIRQA
                     ASSLGAAQYCIDMSVAYARNRKVFGKALASNQAIQFPLAELHTEAEMTRGLVRKTAWH
                     LDRQHHMQVSEWVAMSNYRANRLVCEAADRAIQVHGGIGYSRHTPFEHIYRHHRRYRI
                     TEGSEEIQIRRVAGALFGFWGVQKASTAPP"
     gene            complement(2131..3381)
                     /locus_tag="VF991_15350"
     CDS             complement(2131..3381)
                     /locus_tag="VF991_15350"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX9557869.1"
                     /translation="MQRLYLQFYLTILVVLAVFVGAAALLWRLAEDDARTPQYLDVAA
                     ELTGALLPEADTPVIEQQKALEGLHRKLRFDLALYRGDGGVIAMAGKPAPRFDASRAR
                     TGWRRGPGGPNFTLQLPDGRWLVARQVRERPNPIFWITAFLALVALAVAVGAYPVVRG
                     LGRRLERLKAGVEQFGGNLGARVKVEGRDEVAALAESFNRSAQRIEELVAAHRLLLAN
                     CSHELRTPLARIAVAASLLGEQADARTRQSLKQDVAELDQLIEEILLASRLDAQTVLD
                     RREPVDLLALAAEEAAHYDLEATGTPVTVPGDRLLLRRLIRNLLENAKRYAGNGPIAI
                     SVIAEADRAVLEVADHGPGVPAGERERIFEPFYRLTETAENGRGSGLGLALVRQIARR
                     HGGDAVCLAADGGGSRFRIDLPAA"
     gene            complement(3439..>3769)
                     /locus_tag="VF991_15355"
     CDS             complement(3439..>3769)
                     /locus_tag="VF991_15355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX9557870.1"
                     /translation="GSPQRPEILRFGRLEIDKGARSIRLDGEDRPLTSYQFALLLALA
                     ERAGRVLSRDALMDLLKGEKLEAFDRSVDVHISRIRAAIEDDVKKPRRILTVRGAGYV
                     FARDQDR"
BASE COUNT          584 a         1222 c         1318 g          645 t
ORIGIN      
        1 ccgtaatcga cgatggcgac ggtcatggcc caatggtccg aagcgtaagg gtcagagcac
       61 gcccttggtg ctgggcaccg ccgcggtctg gcgcggatcg atctcgacgg cgacgcgcaa
      121 ggcgcgggcc agacccttga agcagctctc gacgatgtgg tggttgttgt cgccgtagtg
      181 gttccagaca tgcagcgtca gtccgcccag ctgggcgaag gcctggaacc attccttgaa
      241 cagctcggtg tccatggtac cgagcttggg cttggagaag acgaccttcc agatcagata
      301 gggccggttg gaggcgtcga gcgccacctc ggtcagcgtc tcgtccatcg ggatgtgggc
      361 ggcgccatag cggcggatgc cggtacgctc gccgagcgcc ttggccaggc actcgccgag
      421 cacgatgccg ctgtcctcgg tggtgtggtg gtagtcgata tggaggtcgc cctcggcgcg
      481 cagcgtgata tcgatcaggc tgtggcggct gagctgctcg agcatgtgat cgagaaagcc
      541 gatgccggtc ttgatgtcgt acttgccggt gccgtcgagg ttgatggcgg cggcgatccg
      601 cgtctccttg gtcgcgcgcg acacgaacgc ccgccgtcca ccggtccccg gcgtggtcag
      661 gatattgccc tttgcggcct tgggagtggc cttcctggcg gccgttatgc tggcctggcg
      721 ggccatctga aaagtccttt cggttgccgc cccgttcata caggaacgcg gggtccgcgg
      781 tcgagcgcga tagcagtggc taagaccgca tcatggcggc gccgtcgacg ccttttgcac
      841 gccccagaag ccgaacaacg cgccggcgac gcggcggatc tggatctcct ccgagccctc
      901 ggtgatgcgg tagcgccggt ggtggcggta gatgtgctcg aacggcgtgt gacgcgaata
      961 accgatgccg ccatggacct ggatggcgcg gtcggccgct tcgcagacca ggcggttggc
     1021 gcggtaattg gacatcgcca cccactcgct cacctgcatg tggtgctggc ggtcgagatg
     1081 ccaagccgtc ttgcgcacca acccgcgcgt catctcggcc tcggtatgga gctcggcgag
     1141 cgggaactgg atcgcctggt tggaggccag cgccttgccg aacaccttgc ggttcctggc
     1201 gtaggcgacc gacatgtcga tgcagtattg cgccgcgccg aggctggacg ccgcctggcg
     1261 gatgcggttc tcgtgcacga aggtctgcgc cacgtcgagg ccgcggccct cctcgcccag
     1321 catggtcgaa gccggcacct tgacgttggt cagcgagact tcggcgtggt ccgacggcat
     1381 gttgaacgtc caccacatat gctcgacctt gaagcccggc gaggtcaccg gcgtcaggaa
     1441 ggccgatatg ccgcgtgcat cgcccgcctt gcccgaggtg cgggcgaaga cgaggtcgac
     1501 cgtggcggtg tgcatgccag tgttgaaccg cttcatgccg ttgatcaccc agtcggagcc
     1561 ctgcctggtg gcggtggtct ccatgaaggt ggcatccgag ccatggttgg gctcggtcaa
     1621 cccgaaggcg atgcgctcct tgccggtcag catgccctcg aggtagcgct gcttctgctc
     1681 ctgggtgccg aagcggtgca gcagcagggc caccgggaaa ttgccgacga tcgagctctc
     1741 gttctgcagg tcgttgtgca ggccgagccc cttgtgggcg agatgctcgc ggatgatcgc
     1801 catggcgagg ttggagccct ccttgccgcc cagttccttg ggcaagccgt agcgcaagtg
     1861 gcccgctttg tcggcacgcc ggcgcatctc ggccaaaagc gcctcccatt cgtggcgcgg
     1921 ctggccgtcg ttgtcccagt cggtgcgggc gtgctcgcgg cgatagtcga agaagcggat
     1981 attgtcgttc tcgcgctcga gcggccggat ctcgcgctcg atgaatgcgt cgagttcgtg
     2041 caagtacgct gagatgtcgg cgggaatgtc gaagtccatg ggccgttcct ccgctgaacg
     2101 cccttatcct atggtcgttc acctgccatc ttaggcggcc ggcaggtcga tgcggaagcg
     2161 gctgccaccg ccgtctgccg ccaagcaaac tgcgtcaccg ccatgacggc gggcgatctg
     2221 gcggaccagt gccaggccca gtccgctgcc gcgaccattc tcggcggtct cggttaggcg
     2281 atagaacggc tcgaagatgc gctcgcgctc gccggccggc acgccggggc catggtcggc
     2341 gacttccagc acggcgcgat ccgcctccgc gatgaccgag atcgcgatcg gtccgttgcc
     2401 ggcataacgc ttggcgttct ccaaaagatt gcggatcagg cggcgcagca gcaggcgatc
     2461 gcccgggacg gtgaccggcg tgcccgtcgc ctcgaggtcg tagtgcgcgg cctcttcggc
     2521 ggcgagcgcc aagagatcga ccggttcgcg ccgatcgagc accgtctggg cgtcgaggcg
     2581 actcgccaaa aggatttcct cgatcagctg gtcgagctcg gcgacgtcct gcttgaggga
     2641 ctggcgcgtc ctggcatcgg cctgctcgcc cagcaacgac gcggccacgg cgatgcgggc
     2701 gagtggcgtg cgcagctcgt gactgcagtt ggcgagcagc agccggtgtg ccgccaccag
     2761 ctcttcgatg cgctgggcgg agcggttgaa actttcggcc agggcggcca cctcgtcgcg
     2821 accctcgacc ttgacgcgcg cgcccaaatt gccgccgaac tgctcgacgc ctgccttgag
     2881 ccgctcgagc cgccgtccaa ggcctcgcac cacgggatag gcgccgaccg cgactgcgag
     2941 cgccaccagc gccagaaacg ccgtgatcca gaagatcgga ttgggccgct cgcgcacctg
     3001 gcgggcaacc agccagcgcc cgtcgggcaa ctgcaaggtg aagttcggcc cgccgggacc
     3061 gcgccgccag ccggtgcggg cgcgggaagc gtcgaagcgc ggcgccggct tgcccgccat
     3121 ggcgatgacg ccgccgtcgc cgcgatagag ggcgaggtcg aagcgcagct tgcgatgcag
     3181 cccctcgagg gccttttgct gctcgatgac gggcgtgtcg gcctcgggca agagcgcccc
     3241 ggtgagttcg gcggcgacat cgagatactg cggcgtgcgc gcgtcgtcct cggccagccg
     3301 ccacaacagc gccgccgcgc cgacgaacac cgccagcacc accaggatgg tgaggtagaa
     3361 ctggaggtag aggcgctgca tggcgtcagg tcgcacgaat gctggttaag gcaagactgc
     3421 gtgtagcgtc attgcggctc atcgatcctg atcccgcgcg aaaacgtagc cggcgccgcg
     3481 caccgtcagg atgcggcgcg gcttcttgac gtcgtcctcg atggcggcgc gaatacgcga
     3541 gatgtgcaca tccaccgagc ggtcgaaggc ttcgagcttc tcgcccttca ggaggtccat
     3601 cagcgcgtcg cgcgacagca cgcggccggc gcgctcggcg agcgccagca gcagggcgaa
     3661 ctggtaggag gtgagcggac ggtcctcgcc atccagccgg atcgaccgcg cgcccttgtc
     3721 gatctccagc cggccgaagc gcaggatctc aggcctctgg gggctgccc
//
LOCUS       DASWGA010000659         2022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1464253, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000659 DASWGA010000000
VERSION     DASWGA010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1464253"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            481..>2022
                     /locus_tag="VF991_15360"
     CDS             481..>2022
                     /locus_tag="VF991_15360"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX9557871.1"
                     /translation="MSEVDGATLIARSLKQQGIDHLFGVVGFPVTPIAAAAQKEGVAY
                     IGMRNEQAASYAAQAYGYLTGRPGACIVVTGPGVVHGLAGLANAQQNCWPMILFGGAS
                     ETYRGGMGAFQEERQVLIASPFCKFAHGIESVQRIPYYVEMATRNAIYGRPGATYLDV
                     PDDIITGKCDVDKVVQVERAPDPPRMVAPIESIEAALNLLERAERPLVLVGKGMAWSR
                     AENEVRAFIERTQLPFLRSPMGKGVMPDDHPLSVAAARTLALQNADVVFLMGARFNWI
                     FHFGQPPRYAKDVKVIQLDIAPEEIGHNKATEVALVGDGKAIMGQLNQALASRQWFHP
                     KDSPWRQMITKKATENAAQIRPQVDDDEAPANYFRALRDVAAWMPKNAILSAEGAGTM
                     DIGLTQLPSFNARSCLNAGTYGTMGVGLGQAIAACIVHPDRPVIHLSGDSAIGFSGME
                     METLVRYNLPAKIVVLNNGGIGPGMPEIPENPMFNMKPNSLIYGARYDRMMEAFGGKG
                     FFVEDP"
BASE COUNT          379 a          648 c          644 g          351 t
ORIGIN      
        1 ggactcgtca ccgatggcct tgatctgtcg agtttgaccc ggacactgtt cgacacacat
       61 cgacgagttt ttacaccagg gcgttagcac tggccgaatc ggggattgca cgtgccgcaa
      121 aggaggagcg atcatggatg ctgagaaatg tgcggtacag ttcattgtgg cagcggctga
      181 cagccgtcag ccctgaattg cgatggctct ccatggtcta tgcacatcgc gtcggttcga
      241 ggatgtccgc tcgtacgtcg ggtcctcggg gtaaagcgga aatgttgtaa acgggaccaa
      301 ttcgacgctc ctgaccctgc gttgactgtg acgccgtgcg cccgtgcact gcacaaggag
      361 acggcggttg cgtgcgtgcg catcgtggag gacggcgagg tgtcgcgctg gcaaacccct
      421 tttgcggccc tgccataaat gcgtaatctc gcggctgaag tcggtcacaa ggagcaaagc
      481 atgagcgaag tcgacggcgc taccctgata gcgaggagcc tcaaacagca gggcatcgat
      541 cacctgttcg gggtcgtcgg gtttccggtc accccgatcg ccgcagccgc gcagaaggaa
      601 ggcgttgcct atatcggcat gcgcaacgag caagccgcct cctacgcggc gcaagcctac
      661 ggctatctga ccggccgccc cggcgcctgc atcgtcgtga ccggcccagg cgtggtgcac
      721 ggtctcgccg gcctcgccaa tgcccagcaa aattgctggc caatgatcct gttcggcggc
      781 gcctcggaga cctatcgcgg cggcatgggc gcttttcagg aagagcgcca ggtgctgatc
      841 gcctcgccgt tctgcaaatt cgcacacggc atcgagagcg tccagcgcat cccctattat
      901 gtcgagatgg caacccggaa cgcgatctat ggccgccccg gcgccaccta tctcgacgtg
      961 cccgacgaca tcatcaccgg caaatgcgac gtcgacaaag tcgtccaggt cgagcgcgcg
     1021 cccgacccgc cgcgcatggt ggcgccgatc gagagcatcg aggctgcgct gaacctgctc
     1081 gaacgggccg agcggccgct cgttctcgtc ggcaagggca tggcctggtc gcgcgccgag
     1141 aacgaagtcc gcgccttcat cgagcgcacg caactgccat tcctgcgttc gccgatgggc
     1201 aagggcgtga tgccggacga ccatccgctg tcggtggcgg cggcgcgcac gctggcgctc
     1261 cagaacgccg acgtcgtctt cctgatgggc gcgcggttca actggatctt tcatttcggc
     1321 cagccgccgc gctatgcgaa ggacgtcaag gttatccagc tcgacattgc gcccgaggag
     1381 atcggccata acaaggcgac ggaagtagcg ctggtgggtg acggcaaggc catcatgggg
     1441 cagctcaacc aggcgctcgc cagccgccag tggttccatc cgaaggactc gccgtggcgg
     1501 cagatgatca ccaagaaggc gaccgagaac gcggcgcaga tccggccgca ggtcgacgac
     1561 gacgaggcgc cggccaatta tttccgggcc ttgcgcgacg tcgccgcctg gatgccgaag
     1621 aacgcgattc tgagcgccga aggcgccggc acgatggata tcggcctcac ccaattgccg
     1681 agcttcaacg cccgttcctg cctcaacgcc ggcacctacg gcacgatggg ggtcggcctc
     1741 ggccaggcca tcgccgcctg catcgtgcat cccgaccggc cggtcatcca cctctcgggc
     1801 gactcggcga tcggcttttc gggcatggag atggagacgt tggtccgcta caaccttccg
     1861 gccaagatcg tcgtcttgaa caatggcggc atcggccccg gcatgcccga gatcccggaa
     1921 aacccgatgt tcaacatgaa gccgaactcg ctgatctacg gcgcccgcta cgaccggatg
     1981 atggaagcct tcggcggcaa gggtttcttt gtcgaggatc cg
//
LOCUS       DASWGA010000660         1584 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_961568, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000660 DASWGA010000000
VERSION     DASWGA010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961568"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VF991_15365"
     CDS             complement(<1..443)
                     /locus_tag="VF991_15365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557872.1"
                     /translation="MPATPFADRSQAGRLLAAELAPFADRRPIVFGLPRCGVPVAYEI
                     ARHLGAPLDVALVRTVRTPDDRRQLLATILEGDPPEVRIEPDWDKSQTVSRAWLDQQV
                     SEALAEVDRRRRRYRDGSRPVSPTGRVAIVVDQAIGPGHAMAGAIR"
     gene            complement(446..805)
                     /locus_tag="VF991_15370"
     CDS             complement(446..805)
                     /locus_tag="VF991_15370"
                     /inference="COORDINATES: protein motif:HMM:NF040046.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6285 domain-containing protein"
                     /protein_id="HEX9557873.1"
                     /translation="MPQDRPTMAELLAAVADFLREEAVPALDRSHPGLGFQMRVAANS
                     LAILEREARLGPAADAREHQRLVALLGRDGTLEDLNRALAHQLRTGQRDERDPALMVH
                     LEATIADKIAIANPKWR"
     gene            complement(809..>1584)
                     /locus_tag="VF991_15375"
     CDS             complement(809..>1584)
                     /locus_tag="VF991_15375"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEX9557874.1"
                     /translation="RVLAAAHRAGVRAPEPLFELSAADGLGEAYVMRRIAGTAIARKL
                     LRDPPYAEARRLIAGQLGEILARIHATDRASLPPLGCRQAADHIAGLRRSLDLLRQPQ
                     PVFELALAWLDRRKPQPIAQPVLVHGDYRTGNYLADETGVTAILDWEGAHLGDPIEDL
                     GWLCVKSWRFGSVDKPAGGFGSREELWAAYERAGGGKVDPARAHWWEVFGTVRWGIIC
                     HNQAFRHLSGSIKSMELASIGRRAVETEVDLLQLLKSGG"
BASE COUNT          224 a          539 c          597 g          224 t
ORIGIN      
        1 cggatggcgc ccgccatggc atggcccggc ccgatcgcct ggtcgaccac gatggcgacc
       61 cggccggtcg gcgacaccgg ccggctgccg tcgcgatagc gccggcgccg gcgatcgact
      121 tccgccaggg cttcgctcac ctgttgatcg agccaggcgc gcgacacggt ctgcgatttg
      181 tcccagtccg gctcgatccg cacctcgggc gggtcgccct ccaggatcgt cgccagcaat
      241 tggcggcggt cgtcgggggt gcgcaccgtg cgcaccagcg cgacgtcgag cggcgcaccg
      301 agatgccggg cgatttcata ggcgacgggc acgccgcagc gcggcaggcc gaacacgatc
      361 ggccggcggt cggcgaacgg ggcgagctcg gccgccaaga ggcgcccggc ttggctgcga
      421 tcggcaaacg gcgtcgcggg catcatcacc tccacttggg attggcgatg gcaatcttgt
      481 cggcgatggt ggcttcgaga tggaccatca gcgccgggtc gcgctcgtca cgttggccgg
      541 ttcgaagctg gtgcgcaagg gcgcgattga gatcctcgag cgtgccgtcg cggcccagca
      601 gcgcgacgag ccgttggtgc tcgcgggcgt cggcggcggg cccgagccgc gcctcgcgtt
      661 cgaggatggc gagcgaattg gcggccacgc gcatctggaa gccgagaccg ggatggctgc
      721 ggtcgagcgc gggcacggcc tcctcgcgca ggaagtcggc gacggcggcc agcagctcgg
      781 ccatggtggg acggtcttgc ggcatcgctc agcctccgct cttcagcagt tgcagcaggt
      841 cgacctcggt ctcgacggcg cggcggccga tcgaggcgag ctccatcgat ttgatcgagc
      901 ccgagagatg cctgaaagcc tggttgtggc agatgatgcc ccagcgcacc gtgccgaaca
      961 cctcccacca atgggcgcgc gccggatcga ctttaccgcc gcccgcccgc tcgtaggccg
     1021 cccacagttc ctcgcggctg ccgaagccgc cggccggctt gtcgacgctg ccgaaccgcc
     1081 agctcttcac gcacagccag ccgagatcct cgatcggatc gccgagatgg gcgccttccc
     1141 agtcgaggat cgcggtcacg ccggtttcgt cggccaggta gttgccggtg cggtagtcgc
     1201 catggaccag caccggctgg gcgatcggct ggggcttgcg ccggtcgagc caggcgagcg
     1261 ccagttcgaa caccggctgc ggttggcgga gcaggtcgag cgagcggcgc aggccggcga
     1321 tatggtcggc ggcttgccgg cagccaagcg gcggcaggct cgcccggtcg gtggcatgga
     1381 tgcgcgccag gatttcgccc agctggccgg cgatcagccg gcgcgcctcg gcatagggcg
     1441 gatcgcgcag gagcttgcgg gcgatggcgg tgccggcgat gcggcgcatg acataggcct
     1501 cgcccaagcc gtcggcggct gaaagctcga acaggggctc gggcgcgcgc acgcccgcgc
     1561 gatgggcggc ggccaggacg cgga
//
LOCUS       DASWGA010000661         3064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_324349, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000661 DASWGA010000000
VERSION     DASWGA010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324349"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VF991_15380"
     CDS             <1..474
                     /locus_tag="VF991_15380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008595978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557875.1"
                     /translation="PNVGHWPIASFRCAAEFWSLSGHADSAAPPTRQIYGLTAWFSGG
                     QRQRICIARALAMEPELLIADEAVSALDVSVQKQVLELLDEIRQRLNLAVLFITHDLR
                     VAAQICDYVAVMSKGRVVEYGSAEQVFGAPRDDYTKALFAAAPGRNWEFGKFAAA"
     gene            607..822
                     /locus_tag="VF991_15385"
     CDS             607..822
                     /locus_tag="VF991_15385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HEX9557876.1"
                     /translation="MADSVYKVVEVVGTSTESWERAARTAVERASKSLRDLRVAEVVE
                     QDVVIEKGKVTSYRTKLKLSFKYEGGG"
     gene            complement(842..1606)
                     /locus_tag="VF991_15390"
     CDS             complement(842..1606)
                     /locus_tag="VF991_15390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9557877.1"
                     /translation="MAGAARRPLLLRLVEDYWGVLLLLIAWELWVIANRFNPIVMPTP
                     TAVLGDLLGHPDVYVRNVGITLAVAVFGLVVGMLVGTGLAVAAWFSPIASGLLNPLTI
                     LFSSVPVVALIPVIARLLGYDTSTVLAIVVIITFFPSFVFASSGLRSPPPGAEDLLRV
                     LGASRLSLLWRLALPAALPNLAIAFKLAAAHAILAAMVAEFLMGTSGLGYLFAKTKSD
                     FQTEQAFGASAVATVISATAFLLAGLVERRVRERYA"
     gene            complement(1606..2355)
                     /locus_tag="VF991_15395"
     CDS             complement(1606..2355)
                     /locus_tag="VF991_15395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9557878.1"
                     /translation="MSAGARSFLLGVLGIGLFLALWETIGQLGLAGISWPPLSAVLNM
                     LADESRLPLFRRALSATLEETAFGYLWGTGAGLGLAALAHLVPPLRRGSDRLAAVLNS
                     VPSIALGPIFLVLLSRESTPAAVSSIHVFFIVFVSMGSGLQRATVAHRDLFAVLGAAR
                     LKRFWRLELPAALPALVSGLRLAWPAALIGAIIGEWFGAPRGIGILIINAMQNFQIVL
                     LWCAVLLAVASSLLIYGLLTLLERAAYARFG"
     gene            complement(2352..>3064)
                     /locus_tag="VF991_15400"
     CDS             complement(2352..>3064)
                     /locus_tag="VF991_15400"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007754139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557879.1"
                     /translation="LALSELSLGIGTGEFVAILGPSGCGKSTLLRLVAALEQPTGGTV
                     SVAGEPPGEVSANHALGVAFQDHALLPWLTVHDNIALPFKIAGRRADEGAITRLIDLV
                     GLSRFATARPRQLSGGMRQRASIARALVLEPEVLLLDEPFGALDAVTRRQMNVELQRI
                     WSARQITTMLITHSVDEALFLADRVVVMSGRPGRILREVAVPFARPRDPAVMRSEAFH
                     RMVDELTAALETEESPLS"
BASE COUNT          579 a         1043 c         1048 g          394 t
ORIGIN      
        1 cctaatgtcg gtcattggcc catcgcgtca tttcgctgcg ccgcggaatt ttggtcgcta
       61 tcggggcatg cggactctgc cgcgccgccc acccgacaaa tttatgggct cacagcctgg
      121 ttttcgggcg gccagcgcca gcgcatctgc atcgcccgcg cgcttgccat ggagcccgag
      181 ctgctgatcg ccgacgaggc ggtctccgcg ctcgacgtgt cggtgcagaa gcaggtgctg
      241 gagctgctcg acgagatccg ccagcgcctg aacctcgccg tgctgttcat cacccacgac
      301 ctgcgcgtcg ccgcccagat ctgcgactac gtggcggtga tgagcaaggg ccgggtcgtc
      361 gaatacggct cggccgagca ggtcttcggc gcgccgcgcg acgactacac caaggcgctg
      421 ttcgccgccg cgcccggccg caactgggag ttcggcaagt tcgccgccgc atgatttgag
      481 ccggcacaac ggagcgtgct aggctccgcc tcaacacaag gaaaaggccc aagaggccgt
      541 cgctgccgcg cctccccctg accggcaccg gacgagacgg tgaaaccgtg tccacgggag
      601 gatcaaatgg cggacagtgt ctacaaagtg gtcgaggtgg tcggtaccag caccgagtct
      661 tgggaacggg cggcacggac ggccgtggag cgcgcctcca agtcgctgcg cgacctgcgc
      721 gtcgccgagg tcgtcgagca ggacgtcgtg atcgaaaagg gcaaggtcac gtcctatcgc
      781 accaagctga aactctcctt caagtacgaa ggcggcggct gacgccgagc cggacggcgc
      841 gtcaggcgta gcgttcgcgc acgcgccgct cgaccaggcc ggccagcagg aacgcggtcg
      901 ccgaaatgac cgtggcgacg gcgcttgcgc cgaacgcctg ctcggtctgg aaatccgact
      961 tggtcttggc gaagagataa ccgaggcccg aggtgcccat caggaactcc gccaccatgg
     1021 cggccaggat ggcgtgggcg gcggcgagct tgaaggcgat cgcgaggttg ggcagcgccg
     1081 ccggcagcgc caggcgccac aacaggctga gccgcgaggc gcccagcacg cgtaaaaggt
     1141 cctcggcgcc gggcggcggt gagcgcaggc ccgacgatgc aaagacgaag gacggaaaga
     1201 acgtgatgat caccacgatc gccagcacgg tcgacgtgtc gtagcccagc aggcgggcga
     1261 tcaccgggat cagggcgacg accggcaccg agctgaacag gatggtgagc gggttgagta
     1321 ggcccgaggc gatgggcgaa aaccaggcgg cgacggcgag gccggtgccg accagcatgc
     1381 cgacgaccag gccgaagacc gcgaccgcca gcgtgatccc gacattgcgc acataaacgt
     1441 ccggatggcc taaaagatcg cccagcacgg cggtcggcgt cggcatgacg atgggattga
     1501 agcggttggc gatcacccac agttcccagg cgatcagcag cagcaacacg ccccagtaat
     1561 cctcgaccag gcgcaggagc agcggacgtc tggctgcgcc ggccatcagc cgaacctcgc
     1621 ataagcggcg cgctcgagca gcgtcagcag gccgtagatc aacagcgagg aggccaccgc
     1681 cagcagtacc gcgcaccaca acagcacgat ctggaagttc tgcatggcat tgatgatcag
     1741 gatgccgatg ccgcgcggcg cgccgaacca ctcgccgatg atcgcgccga tcagcgcggc
     1801 gggccaggcg agccgcagcc ccgagaccag cgccggcagc gccgccggca attcgagccg
     1861 ccagaaacgt tttagccgag cggcgcccag cacggcgaag agatcgcgat gcgccaccgt
     1921 cgcccgctgc agacccgagc ccatcgacac gaagacgatg aagaagacgt ggatcgacga
     1981 caccgccgcc ggcgtgcttt cgcggctgag caggaccagg aagatcggac cgagcgcgat
     2041 cgacggcacg gaattcagca ccgcggccag gcgatctgaa ccgcggcgca gcggcggcac
     2101 caggtgcgcc agggcggcga ggccgagacc cgcgcccgtc ccccagagat aaccgaatgc
     2161 cgtctcttcc agcgtggccg agagcgcccg ccggaacagc ggcaggcggc tctcgtcggc
     2221 cagcatgttc agcacggcgc tgagcggcgg ccagctgatg ccggcgagtc ccagctggcc
     2281 gatcgtctcc cacaaagcga ggaatagtcc gatgccgagc acgcccagca gaaagctcct
     2341 ggcgcccgcg ctcacgagag cggactttcc tcggtttcca gcgccgccgt cagctcgtcg
     2401 accatgcgat ggaatgcctc gctgcgcatc accgccggat cgcgcggccg tgcgaacggc
     2461 acggcgactt cgcgcaggat gcggccgggc cggccactca tcaccacgac cctgtcggcc
     2521 aggaacaagg cctcgtcgac cgaatgggtg atcagcatgg tggtgatctg gcgcgccgac
     2581 cagatgcgct gcaactcgac gttcatctgc cggcgggtca ccgcgtcgag ggcgccgaac
     2641 ggctcgtcga gcagcagcac ttcgggctcc agcaccaggg cccgcgcgat cgacgcgcgc
     2701 tggcgcatgc cgcccgagag ttgcctgggc cgcgccgtgg cgaagcgcga cagcccgacc
     2761 agatcgatca ggcgcgtgat ggcgccttcg tccgcccggc ggccggctat cttgaacggc
     2821 agcgcgatgt tgtcgtggac ggtgagccaa ggcagcagcg catggtcctg gaaggcgacg
     2881 cccagcgcat ggtttgccga gacttcgccg ggcggttcac cagcgacgct caccgtcccg
     2941 ccggtcggct gctccagcgc cgccaccagc cgcagcaagg tgctcttgcc gcaaccgctg
     3001 gggcccagga tcgccacgaa ctcgccggtg ccgatgccga gcgacagctc cgaaagcgcg
     3061 agca
//
LOCUS       DASWGA010000662         5490 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_712075, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000662 DASWGA010000000
VERSION     DASWGA010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5490
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_712075"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1193
                     /locus_tag="VF991_15405"
     CDS             <1..1193
                     /locus_tag="VF991_15405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557880.1"
                     /translation="RRDQINSRHLAGLLAVVTVYLCSILAASDYAYLSKRFTGLLQLT
                     YSLVIAYAIFLTLVHGERRQIAGILLGFCIFIIVGCLLETYAGLRPISDAVRERLYDA
                     GVVYDADLRDQVLYGRIRPKLFTSEPSAVTFAYTHFCSVWLVVSPWRWKLPVFLGMIG
                     MALFVLPGPTLVLMLLLTIPYLIFLAGARPGRRPSATRLASSLAISILLIGVAIVLGR
                     TIFAERLDELASGRDASFFYRFTGPMLVAFDMFRHYPWAGAGLTGEPFIADKVMDVYM
                     NSPSFQAAWRISRIGDVLTNYFWLHWIYLGLVWGVLCLVAVSLWLRLLGAPNVLYCWT
                     VWLILGQASGSYVGPKTWSVLLIAAAASILRVGARQPRAAPAPAFTPRPQLRFINPPG
                     YLRT"
     gene            1190..2467
                     /locus_tag="VF991_15410"
     CDS             1190..2467
                     /locus_tag="VF991_15410"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HEX9557881.1"
                     /translation="MIPPDARRRGLMAGAGMALAALPAIAAAQQAPRQRSDRSDMLSA
                     AAFGARGDGVADDSAALQAALDAAFAPNGPGFLAIPQGTYKLTRPLRVVTPVGQKGDV
                     GHRHGIIGHGARLVSAIADGGNVLEYVSNATVRFLQIEGLDILGGGREGHGISLECEH
                     KEHYLYNFCLRDITVQGVGGDGCRMMGNVFEGQVINTYLRDNKKNGMTLGHGARAGIL
                     SAIHVFGCVFGQNGQYGVEMVNGCYDAAFHGCYFLLNGKHGLVALNGCTLLSNCGFEN
                     NHEAAPGFDKGGAGIYLQNFGTLVGCTAYSMFNQKRLIDAYVVSQLVLIGCAGSGDAR
                     AKAAGLARLDGEKKKARATIVSSQGAVEYANGFEGLEISGKDGGARFGADWQSPNLVQ
                     LGSYRLWVDRRGRLRLKNGAPTSDEDGTAMGAA"
     gene            complement(3362..3748)
                     /locus_tag="VF991_15415"
                     /pseudo
     CDS             complement(3362..3748)
                     /locus_tag="VF991_15415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964132.1"
                     /note="has catalase and peroxidase activities; incomplete;
                     partial in the middle of a contig; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="catalase-peroxidase"
     gene            complement(3803..5305)
                     /locus_tag="VF991_15420"
     CDS             complement(3803..5305)
                     /locus_tag="VF991_15420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004669753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEX9557882.1"
                     /translation="MDASILTDLAHDPFVQTGVLATAGALVTHALFRRYPAGRLIFQF
                     AFFAGLTALLYHHDIVPYVIAPGDTPAFERIFLALAKIIWWVNAAWVLTSSTRIFLIF
                     ERRPHESRLMQDVVVGVIYLAAALSVLAYVFNVPVGTLIATSGVFAIILGLALQNTLA
                     DVFSGVALDLSRAYKVGDWIVLSDGTQGRVVETNWRGTSLLNGANDLVVLPNSSLAKA
                     QVTNLSSPNRSHGVKLRARMMPTVAPSAISAVMRNVLLSSNSILSTPEPTVEITSLDA
                     QAIEFELAFRVRDFASASAARNEVYDLIYRHAGAAGLALAQPKEAAGVSAGLSQPAAP
                     AAPKATALRLLDTLPLLASLTEAEKQALAETMTRKTYRKGEVLVEEGGKLSSLVIIRT
                     GVVVVACHSEGGELELRRLAPGDYFGESGLVPSACETATVRALTFTVVYEVGQAALAK
                     LMQDRPSIADEIKQTLSRRAKVGASGATSDHGAADVPSISALVSRIRQFF"
BASE COUNT          906 a         1815 c         1782 g          987 t
ORIGIN      
        1 gccgacgcga ccagatcaac tcccggcacc tggcaggcct gctcgccgtc gtcacggtct
       61 atctctgctc gatcctcgcc gccagcgact acgcctatct cagcaagcgg ttcacgggac
      121 tgctgcagct cacctactcg ctggtcatcg cctacgcgat cttcctgacc ctggtgcatg
      181 gcgagcgccg gcagatcgcc ggcatcctgc tcggcttctg catcttcatc atcgtcggct
      241 gcctgctcga gacctacgcc ggtctgcgcc cgatcagcga cgcggtgcgc gaacgcctgt
      301 acgacgccgg cgtggtctac gacgccgacc tgcgcgacca ggtcctctac ggccgcatcc
      361 ggcccaagct cttcacctcc gaaccgtcgg ccgtgacctt cgcctatacg cacttctgct
      421 cggtctggct ggtcgtcagc ccatggcgct ggaagctgcc ggttttcctc ggcatgatcg
      481 gcatggcgct gttcgtgctg ccggggccga ccctggtgct gatgctgctg ctgaccattc
      541 cgtacctgat cttcctcgcc ggcgcgcggc ccggacggcg gccatcggcg acgcgcctgg
      601 cgagctcgct cgcgatctcg attctgctga tcggggtggc gatcgtgctc ggccggacaa
      661 tcttcgccga gcggctggac gagctcgcga gcggccgcga cgccagcttc ttctaccgct
      721 tcaccggccc gatgctcgtg gccttcgaca tgtttcgcca ctacccgtgg gccggcgccg
      781 ggctgaccgg cgagccgttc atcgccgaca aggtgatgga cgtctacatg aactcgccgt
      841 cgttccaggc ggcgtggcgt atctcgcgca tcggcgacgt gctcaccaac tatttctggc
      901 tgcattggat ctacctcggc ctggtgtggg gcgtgctctg cctggtcgcg gtttcgctgt
      961 ggctgcgcct gctgggcgcc cccaatgtgc tttattgctg gaccgtatgg ctcatcctgg
     1021 ggcaggcctc gggctcctat gtcggcccca agacctggag cgtgctgctg atcgcggcgg
     1081 ccgcctcgat cctgagagtc ggcgcccgcc agccccgtgc tgcgccggcg ccggccttta
     1141 cgccccgccc gcaattgcgc ttcatcaacc ctccaggata cctccgaaca tgatcccgcc
     1201 cgatgcacgg cggcgcggcc tgatggcggg cgcgggcatg gcgctcgccg ccctgccggc
     1261 catcgccgcc gcccagcaag caccccgtca gagatctgac agaagcgaca tgctgtcggc
     1321 ggccgcgttc ggcgcccgcg gcgacggcgt cgccgacgac agcgcggcgc tgcaggccgc
     1381 cctcgatgcc gcctttgcgc cgaacggccc gggctttctc gccattccgc agggcaccta
     1441 caagctgacg aggcccctgc gggtggtgac gcccgtcggc cagaaaggcg acgtcgggca
     1501 ccgccacggc atcatcggcc acggcgcgcg gctggtctcg gcgatcgccg acggcggcaa
     1561 cgtcctggag tatgtcagca acgccacggt gcgtttcctg cagatcgagg ggctcgacat
     1621 cctgggcggc ggacgcgaag gccacggcat ctcgctcgag tgcgagcaca aggagcacta
     1681 tctctacaat ttctgcctgc gcgacatcac cgtgcagggt gtgggcggcg acggctgccg
     1741 catgatgggc aacgtcttcg aaggccaggt gatcaacacc tatctgcgcg acaacaagaa
     1801 gaacggcatg accctggggc acggcgcccg cgccggcatc ctgtcggcca tccacgtgtt
     1861 cggttgcgtc ttcggacaga acggccagta cggcgtcgag atggtcaacg gctgctacga
     1921 tgccgccttc cacggctgct acttcctgct caacggcaag cacggcctgg tcgccctgaa
     1981 cggctgcacg ctgctgtcca actgcggctt cgagaacaac cacgaagccg cgcctggttt
     2041 cgacaagggc ggcgccggca tctatctcca gaacttcggc accctggtcg gctgcaccgc
     2101 ctattcgatg ttcaatcaga agcgcctgat cgatgcctat gtcgtcagcc agctggtgct
     2161 gatcggctgc gccggcagcg gcgacgcccg cgccaaggcc gccggcctcg cccgtctcga
     2221 cggcgagaag aagaaggcgc gcgccaccat cgtgagctcg caaggtgccg tcgaatacgc
     2281 caacggcttc gaaggcctcg agatctccgg caaggacggc ggcgcccggt tcggcgccga
     2341 ctggcagagc ccgaacctcg tgcaactggg ctcctaccgc ctgtgggtcg accgccgcgg
     2401 ccgcctgcgg ctcaagaacg gcgcgccgac atcggacgaa gacggcacgg cgatgggcgc
     2461 cgcgtagggg tccttccggc cgagcgcatt tatccgcgcg cggcgggccc cgagaaacgt
     2521 tagtggcgga gactctggtc accggtagaa cggccaccag aatttccaac ggggagtttc
     2581 cgcactttcc gctagtcgca gacagccggg gacagccccg cggaaacatc ggtagaatcg
     2641 gcatcggagg gggttgccgc actttccgct acccttttga gggcgtggcg ggtggatggc
     2701 gcaagaaaat taggttagcg gtatttccgg gatttccggt agtcgctttt cgggggctgg
     2761 gcgggagcgc accccctgaa tgagacagca agacgccgga caggtaggtg acactgacca
     2821 tatccctgcg cccggcactg cacgccggtg tcacgcagtg ccgcgtcagc tgggaagcta
     2881 tgccaaacat ggggctcttc tgcattggcg gatccttcga cgatgacgca tcgaaccaca
     2941 tatcgggccg tcttgcaagt attacttccg tttctggtaa gtaactctct ggagtctcgc
     3001 ggtggtgtct cgcccgtccg acggtgcttt cggcagcgca acgctgaggc tttgcaagac
     3061 gtgcgcgcca acagctgcgc tgtttgggtc caacaccaag ccgccgtctg tgtgcccata
     3121 ctgtgggagt cgaaccgact ttccataagc agcgcagcgc ggttgccata gattcggtta
     3181 ggcggtagta gccggcagtt tccgagccta tgcagcgatc aggtgaggtc gaagcgatcg
     3241 agctccatga ccttcgtcca agccgtcacg aagtcattca cgaatttctc cttcgagtcc
     3301 gcacacgcat agacttctgc gagggcgcgc agctgtgagt gcgcaccgaa gatcagatcg
     3361 accggcgcgc cttgtcgaga ttgacgttgt ccggccagct gttgaccggc gcgaagcgct
     3421 gctggccggc gccggcgccg ccgcggccgt cgccgatgcg atacgtgccc gcgaggtgcc
     3481 acgccatccg gatgaacagc ccgccgtagt ggccgaagtc ggccggccac cactcctgcg
     3541 agtccgtcat caaggcgtga agatccttga tcacggcatc gaggtcgagg ctcttgaatt
     3601 ccttggcgta gtcgaacgcc tcgcccatcg gattggaccg gctggagtgc tggtggagaa
     3661 cctgaaggtt cagctggttg ggccaccagt cacgattcgt gtgtgtgcgt gttccgccgg
     3721 tgaccgggca cttgctttca cttgtcatgc taccctctaa tcgtgatccg attcgtcacc
     3781 gcatcgccga gccgtgcggc cttcaaaaaa actggcggat ccgtgaaacc aacgcagaga
     3841 tggacggtac atcggcggcg ccgtgatcac tagtagctcc ggaagcgcct accttggcac
     3901 gccgcgatag cgtctgtttg atctcgtcgg cgatgctcgg cctgtcctgc atcagcttgg
     3961 ccaatgcggc ctggccgact tcgtagacca cggtgaaggt cagggcgcgg accgttgccg
     4021 tttcgcaggc gctggggacc aagccgcttt cgccgaaata gtcgcccggc gccaaccgac
     4081 gcaattcgag ttcgcctccc tcgctgtggc aggcaaccac gacgacgccg gtgcggatga
     4141 tcaccagaga gctgagcttg ccgccctctt ccaccagcac ttctcccttg cgataggtct
     4201 tgcgcgtcat cgtctcggcc agcgcctgct tctccgcctc ggtgagggac gcgagcaacg
     4261 gcagggtgtc cagcaagcgc agggcggtgg ccttgggcgc tgcgggagcc gccggttgcg
     4321 ataggccggc ggagacgccc gcggcttcct tgggctgggc aagcgccagg cccgcggccc
     4381 cggcatggcg atagatcagg tcgtagacct cgttcctggc cgccgaggcc gacgcgaagt
     4441 cgcggacacg gaacgccagc tcgaactcga tcgcctgggc gtccagcgac gttatctcca
     4501 cagtcggctc cggtgtcgac aggatggagt tgctgctcag cagcacgttg cgcatgaccg
     4561 ccgagatcgc cgaaggcgcc acggtcggca tcatgcgcgc cctgagcttc acgccatggc
     4621 tgcgattggg gctgctgaga ttggtgacct gcgccttggc caggctgctg ttcggcagaa
     4681 cgacgaggtc gttggccccg ttgagcaggc tggtgccgcg ccaattggtc tcgacgacgc
     4741 gtccctgggt gccatcgctc agcacgatcc agtcgccgac cttgtaggcg cggctgagat
     4801 cgagggcgac gcccgagaaa acgtctgcca gcgtgttctg cagggccagg cccaggatga
     4861 tggcgaacac gccggacgtg gcgatcaggg taccgacggg gacgttgaag acataggcga
     4921 gaaccgacag ggcggcggcg aggtagatca cgccgacgac gacatcctgc atcaggcggc
     4981 tctcgtgcgg ccgtctttcg aagatcagga agatgcgcgt ggagctcgtc aacacccacg
     5041 ccgcattgac ccaccagatg atcttggcca gggccaggaa aatgcgctcg aacgcgggtg
     5101 tgtcgcccgg cgcaatgaca taggggacga tgtcgtgatg atacaggagc gccgtgaggc
     5161 ccgcgaagaa ggcgaattgg aagatcaggc gtcccgccgg gtagcgccgg aacaacgcgt
     5221 gggtcacgag cgcgccggcg gttgccagta cgcccgtctg gacgaatgga tcgtgcgcca
     5281 aatcggttag tatcgaggcg tccatcaccg gtgcctggtc agcgatttcg cggcgagacg
     5341 ctcatcccgc ggcgcgcaat cggccgcggg tctgcttgcg gagcggcttc cgtctcgggt
     5401 tccaaggcat ccatggcatc ttcctagaaa agcaccgtga gctcagcccc tggctcgtca
     5461 catagaggct gagcggacga cggctgcctt
//
LOCUS       DASWGA010000663         6162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1339284, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000663 DASWGA010000000
VERSION     DASWGA010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6162
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1339284"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..885
                     /locus_tag="VF991_15425"
     CDS             <1..885
                     /locus_tag="VF991_15425"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557883.1"
                     /translation="VESGLIPGPRLFISCRSIGPTGGHNDRNRRTDIGPPCLCCNGMV
                     FIRCIADGPDEVRKAAREQMRQGADQVKLMVSGGVASPYDPLESLQFSEEEITAAVEE
                     AHAFGRYVLTHAYTPEAITRAVKCGVRTIEHGNLVDAPTAKLMAQKGVYMIPNLVAYD
                     AMKRRAAELGMPKEMLEKNDAVLKYGFAELEHCRKAGVRMAYGSDLLGALEDEQTGEF
                     QIRGRVMPEIDVIRSATLIGAEVVRQEGKLGTVAAGAFADLLVVDGDPLKNLGLFKDG
                     GPHLAAIMKGGRFHKNTL"
     gene            1036..1863
                     /locus_tag="VF991_15430"
     CDS             1036..1863
                     /locus_tag="VF991_15430"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557884.1"
                     /translation="MADALALIRRRARRWALNGAAGVALAYILLPLIFVVWLAFFRQE
                     IPSFPPEGYSLRWFAAILDQRKFVDGFSISFQVAVLAMAIGLALGVPAALCLARYNFM
                     LRGPLANLLLMPVVVPGVVLGTAMYVFHVEVENGLDIDVLGTFYALVTGHIVIVIPWV
                     VRLVTASLAGLDRATEEAAQNLGANPWITFWRITLPAIRPGIVAGALFGFVTSFGNLE
                     MSLFLVGPGRTTLPIVILQYLEWKIDPTIAAVSVVQILLIGTAMLITDRYVKLARVV"
     gene            1865..2917
                     /locus_tag="VF991_15435"
     CDS             1865..2917
                     /locus_tag="VF991_15435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557885.1"
                     /translation="MADVDLRGLSKHYGDFYAVREVSLHIADGEFLVLLGPSGCGKTT
                     TLRMIAGFIEPSAGHVRLAGEDVTLLPPWKRNAGMVFQSYALFPHLTVAQNVAFGLEM
                     RKLARADIARRVEETLALVRLGGYGGRLPRQLSGGQQQRVALARALAIRPDVLLLDEP
                     LSNLDAKLRQEVRVEIRELQRQLGLTTVMVTHDQEEALTMADRLVVMNEGSVRQVGSQ
                     RDLYERPADRFVAGFVGRSTFLDGTVEQPGRFRTDGGLSLACRDGRAGRAALALRPER
                     VEIGAAPRPGLDNSLPGTVEFVSYLGALIDIHVRLSPNDRLVVQIANREGGFAPKVGQ
                     PVHVGWPASAGQVFNE"
     gene            2967..4007
                     /locus_tag="VF991_15440"
     CDS             2967..4007
                     /locus_tag="VF991_15440"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9557886.1"
                     /translation="MSKGFMINRRTVLGGATAFAAGASLPAYAQDNKRIVVGTWGGDY
                     SRLLAKNIETPLLAPKGWDVVKDEANDPPRRAKVLAEKSLRRGTSDIQGVSAANMFEM
                     NEQGTIEQLDYSKMANAANLMPSMKYPYGVGHIYSGKVILFNPKLVSKPTSFAETLDP
                     KHGDKLGIIDIQYQYTMLAAGLASGGSMSNAEPGKERLVACKKAGARIYPSNEALAQA
                     LKTEEIALCIMWKARAVQWQNAGINVETVAPKEGVPMYVSGFVVPKNAPNKAGAYAYL
                     DAMLAPSAQEGFAVDMGYNPTVTNAKVSPDVQKRIGFTEEEQKRLVDLDYAYLAKNDS
                     AFKEWWDKSFKG"
     gene            4004..4897
                     /locus_tag="VF991_15445"
     CDS             4004..4897
                     /locus_tag="VF991_15445"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557887.1"
                     /translation="MTDAALMHGSAVEKRRGEGLTAAALVTPATIFVALCLLAPLAIL
                     FRYSLNEFIPAKKMMVEAVTWANYVKFFTDRYYTSIMGTTVRVAVIVTAICLILGFPL
                     AYVVARTQSRLKHLLIISIILPLFVGNAVRAAGWMTVFGNKGFLNATLMGLGLIDKPL
                     EIMFTETAVIIGIIAVNLPFMVLTLQSVIEGIDRALEEAAFSLGAPPGTMFRRVLWPL
                     ALPGILAGTILTFILAMNAYATPFLLGGPLFKMMAPLVYNQFTQQTNWPFGGAIAFIL
                     MVVTLGLTVAANVIFQRRVRA"
     gene            4944..5723
                     /locus_tag="VF991_15450"
     CDS             4944..5723
                     /locus_tag="VF991_15450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEX9557888.1"
                     /translation="MAEDNRLRRFAVLIDADNTSPRIAAGLFEEIAKFGEASVRRIYG
                     DFSSPRMRSWADILQKYAIDPYQQFAYTTGKNASDIALVIDAMDLLHSRRFDGFCLVS
                     SDSDFTRLASRLREEGADVYGFGAQKTPESFRQACRRFVYIENLLPEAEVSTPEEGSS
                     LKARQPPSAAVPILTKAIAQMETEDGWVGLGVVGQRLANIASDFDPRTYGYRKLSDLV
                     RQTGAFDIDQPDGRALRIRPKPALPSKTRAVAAAAPKRAMK"
     gene            5857..>6162
                     /locus_tag="VF991_15455"
     CDS             5857..>6162
                     /locus_tag="VF991_15455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007606390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEX9557889.1"
                     /translation="MKNSQDPVALAAAVTDARAWTQLLARYRQPSTGRSIVEIAITVV
                     PLAALWVLAWATLDIGYWLALPLAVAAAGFLVRLFAIQHDCGHGAFFRHRLANDWFGH
                     "
BASE COUNT         1025 a         2094 c         1958 g         1085 t
ORIGIN      
        1 gtcgaatcgg gcctgatccc cggcccgcgg ctgttcattt cctgccgctc gatcggcccg
       61 accggcggcc acaacgaccg caaccggcgc accgacatcg gcccgccctg cctgtgctgc
      121 aacggcatgg tgttcatccg ctgcatcgcc gacggcccgg acgaggtgcg caaggcggcg
      181 cgcgagcaga tgcgccaggg cgccgaccag gtgaagctga tggtctcggg cggcgtcgcc
      241 tcgccctacg atccgctcga gtcgctgcag ttctccgagg aggagatcac cgccgccgtc
      301 gaggaggcgc acgccttcgg ccgctacgtg ctgacccacg cctatacgcc tgaagcgatc
      361 acccgcgccg tcaagtgcgg cgtgcgcacc atcgagcacg gcaacctggt cgatgcgccg
      421 accgccaagc tgatggccca gaagggcgtc tacatgatcc cgaacctcgt cgcctatgac
      481 gccatgaagc ggcgcgccgc cgagctcggc atgcccaagg agatgctcga gaagaacgac
      541 gcggtgctga aatacggctt cgccgagctg gagcattgcc gcaaggccgg cgtgcgcatg
      601 gcctacggct ccgatctttt gggcgccctg gaagacgaac agaccggcga gttccagatc
      661 cgcgggcgcg tgatgccgga gatcgacgtc atccgctcgg cgacgttgat cggcgccgaa
      721 gtcgtgcgcc aggaaggcaa gctcggcacc gtcgctgccg gggcgtttgc cgacctcttg
      781 gtggtcgacg gcgatcccct gaagaatctc ggcctgttca aggatggcgg cccgcatctc
      841 gcggccatca tgaagggcgg ccgctttcac aagaatacgc tgtgaggatg agctccgtcg
      901 ttcgacacgt tcatgctcct ctcccccttg gggggaaagg ctgggtgagg gggtgatgca
      961 ggagacgatc ttcgggttga ccccctcacc taacctctcc cccaaggggg agaggaacat
     1021 gagcctgagg cactgatggc agacgctcta gctctcatcc gccgccgcgc ccgccgctgg
     1081 gcgctgaacg gggcagctgg tgtggcgctg gcctacatct tgctgccgct gatcttcgtg
     1141 gtgtggcttg ccttcttccg ccaggaaatc ccctccttcc cgcccgaggg ctattcgctg
     1201 cgctggttcg cagccattct cgatcagcgc aagttcgtcg acggcttttc catcagcttc
     1261 caggtcgccg tgctcgccat ggcgatcggg ctggcgctcg gcgtgccggc cgcgctctgc
     1321 ctggcgcgct ataacttcat gctgcgcggg ccgctcgcca atctgctgct gatgccggtc
     1381 gtggtgcccg gcgtcgtgct cggcacggcc atgtatgtct tccatgtcga agtcgaaaac
     1441 gggctcgata tcgacgtgct gggcaccttc tatgccctgg tgacgggcca tatcgtgatc
     1501 gtcattccct gggtggtgcg gctggtgacg gcaagtctcg ccggactcga tcgcgcgacc
     1561 gaggaggcgg cgcaaaatct cggtgccaac ccgtggatca ccttctggcg catcaccctg
     1621 cccgcgatcc ggccgggcat cgtggccggc gccctgttcg gcttcgtgac ctcgttcggc
     1681 aatctcgaaa tgagcctgtt cctggtcgga ccaggccgca cgaccctgcc gatcgtcatc
     1741 ctccagtatc tcgaatggaa gatcgatccc accatcgccg ccgtctcggt ggtgcagatc
     1801 ctgctgatcg gcacggcgat gctgatcacc gaccgttacg tcaagctggc gcgggtcgtc
     1861 tgacatggcc gacgtcgacc tgcgcgggct gagcaagcac tacggcgatt tctacgccgt
     1921 gcgcgaagtc tcgctgcata tcgccgacgg cgagtttttg gtcctgctgg ggccgtcggg
     1981 ctgcggcaaa accacgacct tgcgcatgat cgcgggcttc atcgaaccga gcgccggcca
     2041 tgtccggctg gccggcgagg atgtgaccct gctgccgccg tggaagcgca acgccggcat
     2101 ggtgttccag agctacgcgc tgtttccgca cctgacggtc gcgcaaaacg tcgcctttgg
     2161 tctggagatg cgcaagctcg cgcgggccga catcgcccgc cgcgtcgagg agactttggc
     2221 cttggtgcgg ctcggcggct atggcggccg cctgccgcgc cagctctcgg gcggccagca
     2281 gcagcgggtg gcgctggcgc gggcccttgc catccggccc gacgtgttgc tgctcgacga
     2341 accgctcagc aatctcgacg ccaagctgcg ccaggaggtg cgggtcgaga tccgcgagct
     2401 gcagcgccag ctcggcctca ccaccgtcat ggtcacccac gaccaggagg aagcgctcac
     2461 catggccgac cggctggtgg tgatgaacga gggctcggtg cgccaggtcg gcagccagcg
     2521 cgacctctat gaaaggccgg ccgaccgctt cgtggcgggt ttcgtcggcc gcagcacctt
     2581 tttagacggc acggtcgagc agccgggacg gttccggacc gacggcggcc tgtcgctcgc
     2641 ctgccgcgac ggccgggccg gccgagccgc cctggcgctc aggcccgaac gggtcgaaat
     2701 tggcgccgca ccgcgccccg gactcgataa cagcctgccg ggtacggtgg aattcgtgtc
     2761 ctatctcggc gccttgatcg acatccacgt gcgcctgtcg cccaacgacc ggctggtggt
     2821 gcagatcgcc aaccgcgaag gaggtttcgc accgaaggtc ggccagccgg tgcatgtcgg
     2881 ctggcccgca tcggccggtc aggtgttcaa tgagtgacgt gcgggaacaa cccgtcagcg
     2941 acggaatcgc aaactaggag gcttccatgt ccaaaggttt catgatcaat cgtcgcaccg
     3001 tcttaggcgg cgcgaccgct tttgcggccg gcgcgagtct tccggcttat gcgcaagaca
     3061 acaagcgcat cgtcgtcggc acctggggcg gcgactattc gcggctcttg gccaagaaca
     3121 tcgagacgcc attgctcgcc cccaagggct gggacgtggt caaggacgag gccaacgacc
     3181 cgccgcgccg cgccaaggtg ctggcggaga agtcgctgcg ccgcggcacg tcggacatcc
     3241 agggcgtgtc ggccgccaac atgttcgaaa tgaacgagca gggcacgatc gaacagctcg
     3301 actattccaa gatggccaac gcggccaacc tgatgccgtc gatgaagtac ccctacggcg
     3361 tcggccatat ctattcgggc aaggtgatcc tgttcaatcc caagctcgtg tcgaagccca
     3421 cgagcttcgc cgagacgctc gaccccaagc acggtgacaa actcggcatc atcgacatcc
     3481 agtatcagta cacgatgctg gcggccgggc tggcctcggg cggctcgatg agcaatgccg
     3541 agccgggcaa ggaacggctg gttgcttgca agaaggcagg cgcacgcatc tatccgtcca
     3601 acgaggcgct cgcccaggcg ctcaagaccg aagagatcgc gctctgcatc atgtggaagg
     3661 cgcgcgccgt gcagtggcag aacgccggca tcaatgtcga gacggtggcg cccaaggaag
     3721 gcgtgccgat gtacgtctcg ggcttcgtgg tgcccaagaa cgcacccaac aaggcggggg
     3781 cctacgccta tctcgacgcc atgctggcgc cgtcggcgca ggagggcttt gccgtcgaca
     3841 tgggctacaa cccgacggtc accaacgcca aggtgtcgcc cgacgtgcaa aagcgcatcg
     3901 gcttcaccga agaagagcag aagcgcttgg tcgacctcga ctacgcctat ctcgccaaga
     3961 acgactccgc cttcaaggag tggtgggaca agtcgttcaa gggatgaccg acgccgctct
     4021 catgcatggc tccgccgttg agaaacggcg gggcgagggc ctgacggctg ccgccctggt
     4081 cacgccggcg acgatcttcg tcgccctctg cctgctggcg ccgctcgcca tcctgttccg
     4141 ctacagcctg aacgaattca ttccggccaa gaagatgatg gtcgaggcgg tgacctgggc
     4201 gaactatgtc aaattcttca ccgaccgcta ctacacctcg atcatgggca cgacggtcag
     4261 ggtggcggtg atcgtcacgg ccatctgcct gatcctgggc tttccgctgg cctacgtggt
     4321 ggcgcgcacg caaagccgcc taaaacacct gctgatcatc tccatcatcc tgccgctgtt
     4381 cgtcggcaac gccgtgcgcg cggcgggctg gatgacggtg ttcggcaaca agggcttcct
     4441 caacgccacg ctgatgggac tcggcctgat cgacaagccg ctggagatca tgttcaccga
     4501 gaccgcggtg atcatcggca tcatcgccgt caacctgccc ttcatggtgc tcaccctgca
     4561 gagcgtcatc gagggcatcg accgcgcgct ggaggaagcg gccttcagcc tgggcgcgcc
     4621 gcccggcacc atgttccgcc gcgtgctgtg gcccttggcg ctgcccggca tcctggccgg
     4681 caccatcctc accttcatcc tggcgatgaa cgcctatgcc acgccgttcc tgctgggcgg
     4741 gcccttgttc aagatgatgg cgccgctggt ctacaaccag ttcacccagc agaccaactg
     4801 gccgttcggc ggcgccatcg ccttcatcct gatggtcgtg accttgggcc tcacggtcgc
     4861 cgccaacgtg atcttccagc gtcgcgtccg cgcttgagaa caagggattt cccggctcct
     4921 cgcagcggcc taagctcccc gccatggcag aagacaaccg cttgcggcga ttcgccgtcc
     4981 tcatcgatgc cgacaacacc tcgccgcgca tcgccgccgg gctcttcgag gagatcgcca
     5041 agttcggcga ggccagcgtg cgacgcatct atggcgactt ctcgagcccg cgcatgaggt
     5101 cgtgggccga catcctgcaa aaatacgcca tcgatcccta ccagcaattc gcctacacga
     5161 cgggcaagaa cgcctccgac atcgccctgg tgatcgacgc catggacctc ctgcacagcc
     5221 ggcggttcga cggtttctgt ctggtttcct cggacagcga cttcacccgc ttggcctccc
     5281 gtcttcgcga ggagggagcc gatgtctatg gcttcggcgc ccagaagacc ccggagagct
     5341 tccgacaggc gtgccggcgc ttcgtttaca tcgagaacct gctgcccgag gccgaggtgt
     5401 cgactcccga agaaggctcc tccctcaagg ctcgccagcc gcccagcgcg gcggttccga
     5461 tcttgaccaa agccatcgcg caaatggaga cggaggacgg ctgggtgggc ttgggcgtcg
     5521 tcggccaacg gctggccaac atcgcctccg acttcgaccc gcgcacctat ggctatcgca
     5581 agctcagcga cctggtccgc cagaccggcg ccttcgacat cgatcagccg gatggccggg
     5641 ccctgcggat ccggccaaaa ccggcgctgc cgtccaaaac ccgcgccgtc gccgcggcgg
     5701 cacccaagcg cgccatgaaa tagcgccgtt cttgccgcag catatttggc gattgggctg
     5761 cttggcgtcg ttgcttttgt cgccgcctgc gcctaagccc gcgggaccgc ccggcccggc
     5821 gccggtgtct ctttttgaac aggaaagttc cctcgattga agaacagcca ggatcccgtg
     5881 gcgctcgccg cggccgtgac ggatgcccgc gcctggacgc agcttctcgc ccgctaccgc
     5941 cagccgagca ccggccgcag catcgtcgag atcgccatca cagtcgtgcc actggccgcg
     6001 ctttgggtgc tggcgtgggc gacgctcgac atcggctatt ggctggcttt gcccctggcc
     6061 gtggcggccg ccggattcct ggtgcggctc tttgccatcc agcacgattg cggccatggc
     6121 gccttcttcc gtcatcggct ggccaacgac tggttcggcc at
//
LOCUS       DASWGA010000664         3195 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1845367, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000664 DASWGA010000000
VERSION     DASWGA010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1845367"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..911)
                     /locus_tag="VF991_15460"
     CDS             complement(<1..911)
                     /locus_tag="VF991_15460"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557890.1"
                     /translation="MSTAASPGAVPTGMALPGLVIAFGMIGDTLLYAVLPLYHEQFGL
                     SLAMVGVLLSLNRWIRLLANSGVAAIGEKVGPHALMITAALGSIVSTALYGLVESAAI
                     QVAARILWGISFAALNLATLAYAVSDRPNAGKRVGISRATIGIVQAFSLVGGALLALT
                     AGPREVFVIYGGITVLALVAALLLPRLPPEPVTQKGFRLPFPHRLEVWGFAMGFAGDG
                     VFLLTLAFLMKDSITSVAPVLATAMLLALRWLVEITTGPIGGWVGDRFGARRISIVNG
                     ALLVAGFGLIAIDHEVIGALMVVMTRG"
     gene            complement(908..1861)
                     /locus_tag="VF991_15465"
     CDS             complement(908..1861)
                     /locus_tag="VF991_15465"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9557891.1"
                     /translation="MALDPESQRLIDLMAAANRPAWNTLSPEAARELYLSLRPGAQGP
                     RPPEVTVVDRTIAGPAGALPVRIYRPASAAADAKLPGLVYAHGGGWVFGNLDSHDVLC
                     AQLALEAGIVVVAIDYRLAPEARFPGAFDDMAAGLKWVSANGPSVGIDPTKLAIGGDS
                     AGGNLAAAVSIWARDNRGPRLRLQLLAYPVTDAVARAESYRRYEDGYGLNAATMEWFF
                     DHYTPDKGTRGDWRVSPLRAGSLAGLAPALVITAGFDPLRDEGRAYAFRLQQEGTQAD
                     LMEFGGMLHGFLSSPMLLHGARRGTTLAAAALREALLQRSE"
     gene            2016..2975
                     /locus_tag="VF991_15470"
     CDS             2016..2975
                     /locus_tag="VF991_15470"
                     /inference="COORDINATES: protein motif:HMM:NF021600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2333 family protein"
                     /protein_id="HEX9557892.1"
                     /translation="MRSFRPGLTKTAAPSGRRRLWSWTWRLVLVALVLYYPVGALVVE
                     DIDDDAQFAPRNVTPGESRAVAIAAQLVTREVDVHTWTPMMPFFMPAGILDNMPNFQR
                     GIMAALGRFSTELMDQLGRTRGSSQTDRDLEQARGFLNEQPNIWIWQPSVSLMPSATS
                     AQKYRAGRDKLVAYNKRLASGQAVFERRADNLQALLDRIANDHGSDSAVIDQHIIEKA
                     GDLFDARCDDIFYFNKGRLYANYLLMRELGIDFESIIREKGLTNAWNGTVETFRIAAQ
                     LDPWIVWNGYPDGLLIPNHLAAQGFYLLRARTQLREISNILLK"
     gene            2985..>3195
                     /locus_tag="VF991_15475"
     CDS             2985..>3195
                     /locus_tag="VF991_15475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003514964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEX9557893.1"
                     /translation="MEIYLPIAEQSMNVFVLLGLGAAAGLLAGMFGVGGGFLATPLLI
                     FVGIPPTVAVASQANQVIANSVSSLQ"
BASE COUNT          564 a         1096 c         1056 g          479 t
ORIGIN      
        1 atgccgcggg tcatgacgac catcagggcg ccgatcactt cgtgatcgat cgcgatcagc
       61 ccgaagcctg ccaccagcaa ggcgccgttt acgatcgaga tccgccttgc gccgaagcga
      121 tcgcccaccc agccgccgat cggcccggtg gtgatctcga ccagccagcg cagcgccaga
      181 agcatcgccg tcgccagcac cggcgccacc gaggtgatcg agtccttcat cagaaaggcg
      241 agcgtcagca ggaaaacgcc gtcgccggca aagcccatcg cgaagcccca gacttccagg
      301 cgatggggaa agggcaggcg gaagcccttc tgcgtcacgg gctcgggcgg caggcggggc
      361 agcagcaggg ccgcgaccag cgcgagcacg gtgatgccgc cgtagatcac gaagacctcg
      421 cgcggtccgg ctgtcagcgc cagcaaggcg ccgccgacca gcgagaacgc ctgcacgatg
      481 ccgatcgtcg cgcggctgat gccgacccgc ttgccggcgt tgggccggtc gctcacggca
      541 taggcaagcg ttgcgagatt gagggcggcg aaggagatgc cccacaggat gcgggccgcg
      601 acctggatgg ccgcactctc gaccaggccg tagagtgccg tggaaacgat cgagcccagg
      661 gcggccgtga tcatcaaggc atgcggcccg accttttcgc cgatcgccgc cacgccggaa
      721 ttggccagca ggcggatcca tcggttgagc gacagcagca cgccgaccat ggcgaggctc
      781 aggccaaact gctcgtggta gagcggcagc acggcataga gcagcgtgtc gccgatcatg
      841 ccgaaggcga tgaccagtcc cggcagggcc atgccggtcg gcacggcgcc gggagaggcg
      901 gcggtgctca ctcgctgcgc tgcagcaagg cctcgcgcag tgcggcggcg gcaagcgtcg
      961 tgccgcggcg cgcaccgtgc agcagcatcg gcgagctcag gaagccgtgc agcatgccgc
     1021 cgaactccat caggtccgct tgggtgcctt cctgctgcag gcggaaggca taggcgcggc
     1081 cttcgtcgcg cagcggatcg aagccggcgg tgatcaccag ggcaggcgcc aagccggcaa
     1141 gcgatccggc gcgcagcggc gacacccgcc agtcgccgcg ggtgcctttg tccggcgtat
     1201 agtggtcgaa gaaccattcc atggtggcgg cgttcagccc gtaaccatcc tcgtagcggc
     1261 gataggactc ggcgcgcgcc acggcatcgg tcaccggata ggcgagcagc tgcagtcgaa
     1321 gccgcggccc tcggttgtcg cgcgcccaga tcgacaccgc cgccgcgagg ttgccgccgg
     1381 cgctgtcgcc gccgatggcg agcttggtgg gatcgatacc gaccgacggt ccgttggctg
     1441 acacccattt cagaccggcc gccatgtcgt cgaaggcgcc agggaagcgg gcctccggcg
     1501 ccaagcgata gtcgatcgca accacgacga tgccggcttc cagcgccagt tgagcgcaca
     1561 ggacatcgtg actgtcgaga ttgccgaaca cccagccgcc accatgggcg tacaccaggc
     1621 ccggcagctt ggcgtcggcc gccgccgagg ccggtcgata gatccgtacc ggcaacgcgc
     1681 ccgcgggacc ggcaatggtg cggtcgacga ctgtcacctc cggcggccgc ggaccttggg
     1741 caccaggacg cagcgacagg tagagctcgc gcgcggcctc cgggctcagc gtgttccatg
     1801 ccgggcgatt ggccgccgcc atcaggtcga tcaatcgctg cgattcggga tcgagtgcca
     1861 ttcctccaaa ctccattcat cgacaaacgc cacactctaa cagtctgcgc ccctgtttcg
     1921 tcacgagacg aatggtaagg tgcgccatga cattcgagcc ggaccacgcg ccttccgcaa
     1981 cgacaccctc atggtggcgt cggacctggg ggcgcatgcg atcgtttcgt ccggggttga
     2041 ccaagaccgc cgcgccgtcg ggcaggcgca ggctgtggag ctggacgtgg cggctcgtgc
     2101 tggtggcgct cgtgctctac tatccggtgg gcgcgctggt cgtcgaggat atcgacgacg
     2161 atgcgcagtt cgcaccgcgc aacgtgacgc cgggcgaaag ccgggcggtc gccatcgccg
     2221 cccaactggt cacccgcgag gtcgatgtcc atacctggac gccgatgatg ccgttcttca
     2281 tgccggccgg cattttagac aacatgccga acttccagcg cggcatcatg gccgcactgg
     2341 gccgcttcag caccgagctg atggaccaac tcggccgcac ccgcggctcg agccagaccg
     2401 atcgcgatct cgagcaggcc cgcggcttcc tgaacgaaca gcccaatatc tggatctggc
     2461 agcccagcgt ctcgctgatg ccgtcggcga cctcggcgca gaaataccgc gccggccgcg
     2521 acaagctcgt ggcctacaac aagcggttgg cgtcgggcca ggcggtgttc gagcgccgcg
     2581 ccgacaacct ccaggccttg ctcgaccgca tcgccaacga ccacggctcc gattcggcgg
     2641 tgatcgacca gcacatcatc gagaaagccg gcgacctctt cgatgcgcgc tgcgacgaca
     2701 tcttctactt caacaagggc cggctctacg ccaactacct gttgatgcgc gagctgggca
     2761 tcgacttcga gagcatcatc cgggaaaagg ggctgaccaa cgcctggaac ggcaccgtcg
     2821 agaccttccg catcgccgcc cagctcgatc cctggatcgt gtggaacggc tatcccgacg
     2881 gtttgctgat ccccaaccat ctcgccgccc agggtttcta tctgctgcgg gcgcgcaccc
     2941 agctgcgcga gatcagcaac atccttctga agtaggccgc cgcggtggag atttacctac
     3001 ccatcgcaga acagtcgatg aacgtgttcg tgctgctggg cctgggcgcc gccgccggcc
     3061 tgctggccgg catgttcggc gtcggcggcg gtttcctggc cacgccgctg ctgatcttcg
     3121 tcggcattcc gccgacagtg gcggtcgcca gccaggccaa ccaggtgatc gccaattcgg
     3181 tgtcctcgct gcagg
//
LOCUS       DASWGA010000665         3467 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1465724, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000665 DASWGA010000000
VERSION     DASWGA010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3467
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1465724"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..784)
                     /locus_tag="VF991_15480"
     CDS             complement(<1..784)
                     /locus_tag="VF991_15480"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEX9557894.1"
                     /translation="MNEVIAAKAPGFRPKVAVVLGSGLGGFAEEVKPVAAIPYAELPG
                     FPQTSVSSHAGQLVLGHVGPTPVAVLQGRAHYYENGRADEMKGAIRAMAEIGCETLLQ
                     TNAAGSLRLDMPPGSVMAITDHINFTGVNPLFGLGSGNNRFVDMIDAYDPKLTEQLMA
                     TARAANIRCHDGVYVWFCGPSFETPAEIRAARILGADAVGMSTAPETILARHAGMKVV
                     ALSLMTNYAAGLVPGKLGHDQTIAVASAASGDVRRLLRLFLEH"
     gene            complement(781..1176)
                     /locus_tag="VF991_15485"
     CDS             complement(781..1176)
                     /locus_tag="VF991_15485"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEX9557895.1"
                     /translation="MEDLLHLAQRMMLRAYAPYSKFHVGAAVRAEDGSIHGACNVENA
                     AYPQGLCAEAGAISALVAAGHKHVLECLIVGPGPEVITPCGGCRQKLREFASDETPVH
                     LCGPDGLHRTVTLGQLLPLSFGPHNLAKP"
     gene            complement(1176..2096)
                     /locus_tag="VF991_15490"
     CDS             complement(1176..2096)
                     /locus_tag="VF991_15490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557896.1"
                     /translation="MDEALSFVFLMLAATLRVATPLVLCAMGGLFSEKSGIIDVGLEG
                     KMLMAAFFAAATAAVTGSAWLGVVAAILAAEAMALLHGFACITYRGNQVVSGVAINIL
                     AAGLTVVLGAAWFNRGGQTPALVGDQRLLPLLLPGAGDNILVYLALAAVPLTWWVIER
                     TRFGLRLRAVGEMPLAVDTAGISVSWLRYRAVLLCGLFAGLAGAYLSVAQNAGFSRDM
                     TAGQGFIALAAIIFGKWRPFPAFGACLIFGLLDAVAIRLQGVRLPAVGEVPVQLIQAL
                     PYLLTVFLLAGFIGRATAPKAAGVPYEKEH"
     gene            complement(2099..3196)
                     /locus_tag="VF991_15495"
     CDS             complement(2099..3196)
                     /locus_tag="VF991_15495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557897.1"
                     /translation="MRAQRQPLPVWAEIAVLPLINIALAFVTVGIIVRIIGVDPLHAL
                     RLLVVGAIGSSESIGYTLYYATNFIFTGLAVAVAFHAGLFNIGGEGQAYIGGLGCGLA
                     ILALDRYLPAWLMIPLAIIAAALFGAAWAAVPAWLQAWRGSHIVITTIMFNFVASALM
                     VYLMVNVLIAPGSMTPQSRNFADSGKLPSVHDLLAAVGITVAPSALNLSIVLAVACCI
                     AVWVFLWHTPWGYALRTMGHNPEAAIYAGTNLRHMTMLAMCLSGALAGFVGVNELMGV
                     HQRIVLDFPAGYGFAGIAVALMGRSHPLGILLAALLFGALQQGGAELAFEIPTITREM
                     VVVIQGLIILFSGALMHLPRPWLQSLLALKG"
     gene            complement(3193..>3467)
                     /locus_tag="VF991_15500"
     CDS             complement(3193..>3467)
                     /locus_tag="VF991_15500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010970667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein"
                     /protein_id="HEX9557898.1"
                     /translation="AREMERDPEVLLVGQPTRGVDIGAIEFIHRELVKARDQGCAVLV
                     ISVELDEILSLADRILVMFAGKIVGEVPAGRADERTLGLMMAGAKA"
BASE COUNT          644 a         1161 c         1192 g          470 t
ORIGIN      
        1 aatgttcgag gaacagccgc agcagccgcc gcacatcgcc ggacgccgcg ctggccacgg
       61 caatcgtctg atcatggccg agcttgcccg ggacgaggcc cgcggcgtag ttggtcatca
      121 aggacagcgc caccaccttc atgccggcgt ggcgggcaag gatcgtttcc ggcgccgtcg
      181 acatgccgac ggcatcggcg cccaggatgc gcgcggcgcg gatctcggcc ggcgtctcga
      241 agctcggccc acagaaccag acatagacgc cgtcgtgaca acggatgttc gccgcccgcg
      301 ccgtcgccat cagctgttcg gtcagcttgg gatcgtaggc atcgatcatg tcgacgaagc
      361 gattgttgcc cgatcccagg ccgaacagcg gattgacccc ggtgaagttg atgtgatcgg
      421 tgatcgccat caccgagccg ggcggcatgt cgagcctcag gctgcctgcc gcattcgtct
      481 gcaacagcgt ctcgcagccg atctcggcca tggcgcggat cgcgcccttc atctcgtcgg
      541 cgcggccgtt ctcgtagtag tgcgcgcgac cttgcagcac ggcaaccggc gtgggcccga
      601 catgacccag cacgagttgc ccggcatggc tgctgacgct ggtctgcggg aaccccggca
      661 gctcggcata agggatcgcg gcaacgggct tcacctcttc ggcgaagccg cccaggccgg
      721 agcccagcac gacggctacc ttcggccgga atccgggcgc cttggctgca atcacctcgt
      781 tcatggcttg gcgagattgt gcgggccgaa ggacagcggc aggagctggc ccagggtcac
      841 ggtgcggtgc agcccgtcgg gaccgcagag atggaccggc gtctcgtccg atgcgaattc
      901 gcgcagcttc tggcggcagc cgccgcacgg cgtgatgacc tcggggccgg ggccgacgat
      961 cagacattcg aggacgtgct tgtggcccgc cgccaccagg gccgagatgg caccggcttc
     1021 ggcgcacagg ccctgcgggt aggccgcgtt ctcgacattg caggcgccgt ggatcgaccc
     1081 gtcctcggcg cgcaccgccg cgccgacgtg gaacttcgaa tagggcgcgt aagcgcgcag
     1141 catcatgcgt tgcgcgaggt ggagcaggtc ctccatcaat gttccttttc gtagggtacg
     1201 ccggcagcct tgggtgcggt ggcgcggccg atgaagcccg ccagcaagaa cacggtgaga
     1261 agataaggca aagcctggat cagttgcacc ggcacttcgc ccaccgccgg cagccgcacg
     1321 ccctgcaggc ggatggccac ggcatcgagc agcccgaaaa tcagacaggc gccgaacgcc
     1381 ggaaagggcc gccacttgcc gaagatgatg gcggcaagcg cgataaaacc ctgccccgcc
     1441 gtcatgtcgc ggctgaagcc tgcgttctgg gcgaccgaga gataggcgcc cgccaagccg
     1501 gcgaacagcc cgcacagcag caccgcgcgg tagcgcagcc aggacaccga gatgccggcg
     1561 gtgtcgacgg caagcggcat ctcgccgacc gcgcgcaggc gcagcccaaa gcgcgtgcgc
     1621 tcgatcaccc accaggtgag cggcaccgcg gcgagcgcaa ggtagaccag gatgttgtcg
     1681 ccggcgccgg gcagcaatag cggcagcagg cgctggtcgc cgaccagcgc aggcgtctgg
     1741 ccgccgcggt tgaaccaggc ggcgcccagc acgacggtga ggccggccgc caggatgttg
     1801 atggcgacac cgctcaccac ctggttgccg cgataggtga tgcaggcaaa gccgtgcagc
     1861 agcgccatcg cttcggcggc caggatcgcg gccaccacgc cgagccaggc cgagccggtg
     1921 accgcggcgg tcgcggcggc gaagaaggcg gccatcagca tcttgccttc gaggccgaca
     1981 tcgatgatgc cgcttttctc ggagaacagg ccgcccatgg cgcagagcac caggggcgtc
     2041 gccacgcgca gggtcgcggc gagcatgagg aagacgaagg aaagcgcctc gtccaccgtc
     2101 agcctttgag cgccagcagg gattgcagcc agggccgcgg cagatgcatc agcgcgccgg
     2161 agaacaggat gatcaggccc tggatcacca ccaccatctc gcgggtgatg gtcgggatct
     2221 cgaaggccag ctcggcgccg ccctgctgga gggcgccgaa cagcagcgcc gccagcagga
     2281 tgccgagcgg atggctgcgg cccatcaggg cgacggcgat gccggcgaaa ccgtagcccg
     2341 ccgggaagtc gagcacgatg cgctgatgga cacccatcag ctcgttgacg ccgacgaagc
     2401 ccgccagcgc gccggacagg cacatggcga gcatggtcat gtgcctgagg ttggtgccgg
     2461 catagatcgc ggcctcggga ttgtgtccca tggtgcgcag cgcatagccc cacggcgtgt
     2521 gccacaggaa cacccagacg gcgatgcagc aggcgacggc cagcacgatc gagagattga
     2581 gcgccgacgg cgccaccgtg atgccgacag cagccagcag gtcgtgcacc gagggcagtt
     2641 tgcctgagtc ggcgaagttg cggctctgcg gggtcatcga gcccggcgcg atcagcacat
     2701 tcaccatcag gtagaccatc aacgccgagg cgacgaagtt gaacatgatg gtggtgatga
     2761 cgatatggct gccccgccac gcctgcagcc aggccggcac cgcagcccac gccgcgccga
     2821 acagcgcggc cgcgatgatg gccagcggga tcatcagcca ggccggcagg tatcgatcga
     2881 gcgccaggat ggcgagcccg cagcccaggc cgccgatata ggcctggccc tcgccgccga
     2941 tgttgaacag cccggcatgg aaggcgacgg caacggccag gccggtaaag atgaagttgg
     3001 tggcgtaata gagcgtgtag ccgatcgatt cagacgagcc gatggcgccg accacgagca
     3061 gccgcaaggc atgcaatgga tcgacgccga tgatgcgaac gatgatgccg accgtgacga
     3121 aggcgagcgc gatgttgatc agcggcagca ccgcgatttc cgcccagaca ggcagcggct
     3181 gacgctgtgc cctcacgcct ttgcccccgc catcatcagg ccgagcgtac gttcgtcggc
     3241 gcggcccgcc ggcacctcgc ccacgatttt cccggcgaac atcaccagga tgcggtcggc
     3301 gagcgagagg atctcgtcga gttcgaccga gatcaccagc acggcgcagc cctggtcgcg
     3361 agccttcacc agctcgcgat ggatgaattc gatggcgccg atatccacgc cgcgcgtcgg
     3421 ctggccgacc agcagcacct ccggatcgcg ctccatctcg cgcgcca
//
LOCUS       DASWGA010000666         6644 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1603185, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000666 DASWGA010000000
VERSION     DASWGA010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6644
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1603185"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VF991_15505"
     CDS             complement(<1..659)
                     /locus_tag="VF991_15505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX9557899.1"
                     /translation="MSGALIFVAALVIVALVLVFAGVKTVAQGTNWTIERFGRYTRTL
                     PPGLHLIVPFMDTVGRKMNMQENVLDIPPQKVITKDNATVQVDAVAFYQVIDAARAAY
                     EVQNLHLAITNLALTNIRSVMGNMALDEALSKRNEINNILLSVIDQATSPWGVKVLRI
                     EVKDIAPPDDIVVAMGRQMKAEREKRATILEAEGVRESSIQRAEGEKQSAILTAEGRR
                     EA"
     gene            complement(724..1464)
                     /locus_tag="VF991_15510"
     CDS             complement(724..1464)
                     /locus_tag="VF991_15510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927401.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX9557900.1"
                     /translation="MHQEHSRPGRVGALLKKRGYELHRLCPNLGCDLPEDMSDYAGVV
                     IFGGPMSANDCGTLAGIKCELDWIPKVVEAGVPFLGLCLGAQLLARAAGGRVSPHREG
                     KVEVGYVDIEPTEAGREWIKSPMKVYQWHREGMRIPACCELLATNETYPVQAFRHGNN
                     AFGFQFHPEVTLEMKQIWTMKAAERLKLPGAQQRGVHLSMHPLYDPPLDRWINGFLDR
                     WLAADTRLASVPVKPDEPKSPEFAAAAS"
     gene            1584..2201
                     /locus_tag="VF991_15515"
     CDS             1584..2201
                     /locus_tag="VF991_15515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HEX9557901.1"
                     /translation="MARQLDFYFDCSSPWTYLAFHAVQPLAAELGAEIAWKPILVGGV
                     FNAVNPTVYDSRAKPNPRKQAYMLKDLADWARLYGLRIVFPPKVFPVNSVKCMRGAFV
                     ALDEGKLVAYAAAAFEAYWGDDRDIAREEVLAEVAAKAGLERQRFFAAIETESCKARL
                     RASTDELIARGGFGSPTLFVGNAMFFGNDRLPLVRAAWEAGEQAA"
     gene            2212..3513
                     /locus_tag="VF991_15520"
     CDS             2212..3513
                     /locus_tag="VF991_15520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX9557902.1"
                     /translation="MSGNSDPEFWAKARAHLVRYGGAFSPLIAESAAGNFFTDADGRR
                     ILDFTSGQMSAILGHSHPEIVEVARKWIGELDHLYSTILSRPVVDLAALIAKISPGQL
                     DRVLLVSTGGESNEAALRMAKLVTGRHEIVAMSRSWHGVTGGAASATYSSSRKGYGPP
                     QPGSLVLPAPDSYRSRFIDESGIYDWKSELEFGFELVDRQSSGALAACIVEPILSSGG
                     VLEPPEGYMAALAEKCRERDMQLIFDEAQTGLGRTGQLFACERDGVVPQYLTLSKTLG
                     AGLPLAAMLTTAAIEDVAAERGFLFYTTHASDPLPAAVGLKVIEVILRDGLAERAARL
                     GQRLKAGLLALKQRYDCIGDVRGRGLLLGLDLVKDRRTKAADPELAQRVARECLALGM
                     MTSVVRGGLGIFRIAPPITVEAAEIDLGLDIFDRALARAVH"
     gene            3628..4185
                     /locus_tag="VF991_15525"
     CDS             3628..4185
                     /locus_tag="VF991_15525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557903.1"
                     /translation="MINKLSRAALVMAGGLALGGCPFEQASTTAPASRPPAGDYQQAV
                     PASTPPTNIRAICYNAADLTVYRARMLQQELSVGTLQCQNKNGSRAYEREYTIFVSKF
                     QAELASNTRSLQQLAGRKRLNVDVVVTEFANRSAQRAPVDREFCSRTKRAFDWVLSAQ
                     VTTLAQAPPMYDLGPEMNVHPCPAP"
     gene            complement(4234..5205)
                     /locus_tag="VF991_15530"
     CDS             complement(4234..5205)
                     /locus_tag="VF991_15530"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase family protein"
                     /protein_id="HEX9557904.1"
                     /translation="MLPKVSDFLTAEQVEELRGKSDVAGALLVMHAWALIAASMVLFA
                     WWPNPFTFLLGVMVIGGRQLGLAILMHDAAHGLLFANRRLNDGLATWLCAWPVFTSLA
                     LYRPYHLQHHRFTQQAEDPDLGLSAPFPISRASLRRKIVRDLTGQTAFQRRGEQIRRA
                     LGPADASLAGRLASLWRKEKGSLSMNVLLFAVLAAAGYWWLYPVMWLLPLATWYQLIS
                     RIRNIAEHAVVPDNDDPLRNTRTTQANPLERLLLAPYWVNYHLEHHLFMFVPCWRLPA
                     AHQALLAAGRKHEMELQPSYLAVLRLATSRVADSTGRPGSRGTAQHI"
     gene            complement(5195..6448)
                     /locus_tag="VF991_15535"
     CDS             complement(5195..6448)
                     /locus_tag="VF991_15535"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557905.1"
                     /translation="MPISPLLIWVMGFEAAKAGKLPTAEQHAELRRLLHEAMDAGACG
                     WSAQRMLPTGPAAVQRDYDGSAMPTDVMHDETCRELARVLAERNDGFVQMLLVSGDNA
                     RDRAFYEEVATISGRPVIMNVIQAFDHRPEIHRRVLAWLKSCRERGIRVVGQGLTTDA
                     GFTFTFEDWNLFDDSQPWCEATTGTREERLAKLADPARRPGLREKLPITAVGPLPQIA
                     IVGPRLEKNKKWLDYTLAHAAEKMGKHPVDVMLDMVVEEDLKTEFFAAPPNGRIEYLR
                     ELVDDPYVLFGVSDGGAHTKFLTAGRYPTETLCKVVREHRMLSLEDVHWRLSALPAEV
                     AGFRGRGVLKKGAPADIVVYDLDGLSVLPDEIAHDLPGGEWRRIQRAEGYKYVLVNGE
                     VTIRNDRPTNTHSGRLLRHGGERAA"
     gene            complement(6427..>6644)
                     /locus_tag="VF991_15540"
     CDS             complement(6427..>6644)
                     /locus_tag="VF991_15540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557906.1"
                     /translation="GSRLPRFRGDIGIKDGRIAEIGHIAGSEADETIDAGGLIVAPGF
                     VDPSSSTASRRRPRRSTSCPTCRSRRS"
BASE COUNT         1082 a         2246 c         2200 g         1116 t
ORIGIN      
        1 gcctcgcggc ggccctcggc ggtcaggatg gccgattgct tctcgccctc ggcgcgctgg
       61 atgctcgatt cgcgcacgcc ctcggcctcg aggatggtag cacgcttttc gcgctcggcc
      121 ttcatctgac ggcccatcgc caccacgata tcgtcgggcg gggcgatatc cttgacctcg
      181 atgcgcagca ccttgacacc ccacgggctg gtcgcctgat cgatcaccga cagcaggatg
      241 ttgttgatct cgttgcgttt ggacagcgcc tcgtcgagcg ccatgttgcc catgacgctt
      301 ctgatgttgg tcagcgccag attggtgatg gcgaggtgga ggttctgcac ctcgtaggcc
      361 gcgcgcgccg cgtcaatcac ctggtagaag gcgacggcgt cgacctgcac ggtagcgttg
      421 tccttggtta tgaccttttg cggcgggata tcgaggacgt tctcctgcat gttcatcttg
      481 cggccgaccg tgtccatgaa cggcacaatg agatgcaggc ccggcggcag ggtgcgcgtg
      541 taacggccga accgctcgat cgtccagttg gtgccctgcg ccaccgtctt cacgcccgcg
      601 aacaccagca ccagcgccac gatcaccaga gccgcgacga agatcagagc acccgacatt
      661 attgcgcctc ccccagcttc gcgtagagcc tagcccatgg cagtgcgcca agccatcgcg
      721 ccgctagctg gcggcggcgg cgaattcggg agattttggc tcgtcaggct tcaccggcac
      781 ggaagcgagc cgcgtgtcgg ccgccagcca gcggtcgagg aagccgttga tccagcggtc
      841 gagcggcgga tcgtagagag gatgcatgga cagatgcacg ccgcgctgct gggcgcccgg
      901 cagtttcagg cgctcggcgg ctttcatggt ccagatctgt ttcatctcca gggtgacctc
      961 gggatgaaac tggaagccga aggcgttgtt gccgtggcga aaggcctgga ccgggtaggt
     1021 ctcgttggtc gccagaagct cgcagcacgc cgggatccgc atgccctcgc ggtgccactg
     1081 gtagaccttc atcggcgatt tgatccattc gcggccggct tcggtcggct cgatgtcgac
     1141 gtagccaacc tcgaccttgc cctcgcgatg agggcttacc cggccgccgg cggcgcgggc
     1201 cagcagctgg gcgccgaggc aaaggcctag gaatggcacg cccgcctcga ccaccttggg
     1261 aatccagtcc agctcgcact tgatgccggc cagcgtgccg caatcgttgg ccgacatcgg
     1321 accgccgaaa atcaccacgc cggcatagtc ggacatgtct tccggcaggt cgcagccgag
     1381 gttggggcag aggcggtgga gctcgtaacc gcgcttcttg aggagggcgc cgacccgacc
     1441 gggccgcgaa tgctcctggt gcacgacgac cgctatcctt ttgcgggtaa tctttttggg
     1501 cttttcagcc agtaccgtca tggatttgca agatacgcgt cggttgtggc aacgacaagg
     1561 cggaccaacg gcggagagac gaaatggcgc gccagctcga cttctacttc gactgctcca
     1621 gcccctggac gtatctcgcc tttcacgccg tccagccgct ggcggccgag ctcggcgcgg
     1681 aaattgcctg gaagcccatc ctggtcggcg gcgtgttcaa cgccgtcaac ccgaccgtct
     1741 acgacagccg cgccaagccc aacccgcgca agcaggccta catgctgaag gacctggccg
     1801 attgggcgcg cctctatgga ctgcggatcg tctttccgcc caaggtcttt ccggtgaaca
     1861 gtgtcaaatg catgcgcggc gctttcgtcg ccctcgacga gggcaagctc gtggcttacg
     1921 ccgccgccgc cttcgaggcc tactggggcg acgaccgcga catcgcgcgc gaagaggtgc
     1981 tggccgaggt cgccgccaag gccggcctgg agcgccagcg ctttttcgcc gccatcgaaa
     2041 ccgagtcctg caaggcaagg ctgcgcgcca gcaccgacga gctgatcgcc cgcggcggct
     2101 tcggcagccc gaccctgttc gtcggcaatg cgatgttctt cggcaacgac cggctgccgc
     2161 tggtgcgggc ggcctgggaa gcgggcgagc aggcggcatg agggaggcgg catgagcggc
     2221 aacagcgatc ctgaattctg ggccaaggcg cgggcgcacc tggtacgcta tggcggcgcc
     2281 ttctcgccgc tgatcgccga aagcgcggcc ggcaatttct tcaccgatgc cgacggccgc
     2341 cgaatcctcg atttcacctc gggccagatg agcgccatcc tgggccacag ccatccggag
     2401 atcgtcgagg tcgcccgcaa atggatcggc gagctcgacc atctctattc caccatcctg
     2461 tcgcgtccgg tcgtcgatct tgcggcgctg atcgcgaaga tctcgccggg ccagctcgat
     2521 cgcgtgctgc tggtctcgac cggcggcgag tccaacgagg ccgcccttcg gatggccaag
     2581 ctggtgaccg gccgccacga gatcgtggcg atgagccgct cctggcacgg cgtcaccggc
     2641 ggcgccgcct cggccaccta ctcctctagc cgcaagggct acggcccacc gcagcccggc
     2701 tcgctggtgc tgccggcacc cgacagctac cgctcacgct tcatcgacga aagcgggatc
     2761 tacgactgga agtccgagct cgagttcggc ttcgagctgg tggaccgcca gtcgagcggc
     2821 gcgctcgccg cctgcatcgt cgagccgatc ctgagctcgg gcggcgtgct cgagccgccc
     2881 gaaggctaca tggcggcgct ggcggagaaa tgccgcgagc gcgacatgca gctcatcttc
     2941 gacgaggcgc agaccggact cggccgcacc ggccagctgt tcgcctgcga gcgcgacggc
     3001 gtcgtgccgc agtatctcac gctctccaag acgctgggcg ccggcctgcc gctggccgcc
     3061 atgctgacga cggcggcgat cgaggacgtc gcggccgagc gcggtttcct cttctacacc
     3121 acacatgcct ccgacccgtt gccggcggcg gtcgggctaa aggtcatcga ggtcatcctg
     3181 cgcgacggcc tcgccgaacg cgccgctcgg ctgggccaac ggctcaaggc cggcctgctt
     3241 gcgctaaaac agcgctacga ttgcatcggc gacgtgcggg gccgcggcct gctgcttggc
     3301 ctcgacctgg tgaaggaccg ccgcaccaag gcggccgacc ccgagctggc gcagcgcgtg
     3361 gcccgcgaat gcctggcgct cggcatgatg accagtgtcg tgcgcggcgg cctcggcatc
     3421 ttccgcatcg cgccgcccat caccgtcgag gcggcggaaa tcgacctggg gctggacata
     3481 ttcgaccggg ctcttgcccg ggccgtgcat tgaaatcggc gcctttcggc cgatgcctgg
     3541 ggaacccgcg gtaattgggt ttgaaacacg ccgccatatg ttgtacccgc ttgcggtttc
     3601 cggccaatgc gttgggggag tgtacggatg atcaataagc tatcgcgggc ggcactggtg
     3661 atggcgggcg gtttggcact gggtggctgt ccgttcgagc aggccagcac cacggcgccg
     3721 gccagccggc cgccggcagg cgactatcag caagccgtcc cagcatcgac gccgccgacc
     3781 aacatccgcg ccatctgcta caacgccgcc gatcttacgg tctatcgcgc ccgcatgctg
     3841 cagcaggagc tctcggtcgg caccctgcag tgccagaaca agaacggcag ccgcgcctat
     3901 gagcgcgaat acacaatctt cgtttccaag ttccaggccg agctcgccag caacacacgc
     3961 agcctgcagc aacttgccgg ccgcaagcgc ctcaatgtcg atgtcgtggt gaccgaattc
     4021 gccaaccgct cggctcagcg cgcgccggtc gacagggaat tctgctcgcg caccaagcgg
     4081 gcgttcgact gggtgctgtc ggcgcaggtc accacgctcg cccaggcgcc gccgatgtac
     4141 gatctcggtc ccgagatgaa tgtccatccc tgcccggcgc cctgatatcg gcgtcgacgc
     4201 gacagaaggc ggcccgtacg ggccgctttt ttgtcagatg tgctgtgccg tgccgcgcga
     4261 tcccgggcgg cctgtcgaat ccgcgacccg cgaggtcgcc aaccgcagca cggcgagata
     4321 gctcggctgc agctccattt cgtgctttcg cccggccgcg agcaaggctt ggtgggcggc
     4381 cggcaggcgc cagcacggca cgaacatgaa cagatggtgc tcgaggtgat agttcaccca
     4441 gtagggcgcg agcagcagtc gctccagggg attggcttgg gtcgtgcggg tgttgcgcaa
     4501 cgggtcgtcg ttgtcgggca cgacggcatg ctcggcgatg ttcctgatgc ggctgatgag
     4561 ctggtaccag gtcgccaacg gcagcagcca catcaccgga tagagccacc agtagcccgc
     4621 cgccgcgagg acggcgaaca gcaacacgtt catcgacagc gagcccttct ccttgcgcca
     4681 gaggctggcg agccgcccag ccaatgaggc gtcggccggt ccgagcgccc ggcggatctg
     4741 ctcgccgcgg cgctggaagg cggtctgccc cgtgagatcg cgcacgatct tgcgccgaag
     4801 actggcgcgg ctgatcggaa acggcgccga taggccgagg tcgggatcct cggcctgctg
     4861 cgtgaagcgg tgatgctgca ggtgataggg ccgatagagc gcgaggctgg tgaagaccgg
     4921 ccaggcacag agccacgtgg cgagcccgtc gttcaggcgt cggttggcga acagcagccc
     4981 gtgcgcggcg tcgtgcatca ggatggcgag gccgagctgg cggccgccga tcaccatcac
     5041 cccgagaaga aaggtgaagg ggttgggcca ccaggcgaac agcaccatgc tggccgcgat
     5101 cagcgcccag gcatgcatca ccaggagcgc gcccgcgaca tcggacttgc cgcgcagttc
     5161 ctcgacctgc tcggccgtca ggaagtcgct gaccttaggc agcacgttcg ccgccgtgcc
     5221 gcaacaggcg gcccgaatgg gtgttggtcg gccggtcgtt gcggatggtg acctcgccgt
     5281 tcaccagcac gtatttataa ccctcggcgc gctggatgcg ccgccactcg ccgcccggca
     5341 gatcatgggc gatctcgtcg ggcagcacgc tgaggccgtc taaatcgtag accacgatgt
     5401 cggccggcgc gcccttcttc agcacgccgc ggccgcgaaa gcccgcgacc tcggccggca
     5461 gcgccgacag gcgccaatgc acgtcttcca ggctcagcat ccgatgctcg cgcaccacct
     5521 tgcacagggt ttccgtcgga tagcggccgg ccgtcaggaa cttggtatgg gcgccgccat
     5581 cggacacgcc gaacagcaca taagggtcgt cgaccagctc cctcaggtat tcgatcctgc
     5641 cgttgggcgg ggcggcgaag aactcggtct ttaggtcctc ctcgaccacc atgtcgagca
     5701 tgacgtcgac cgggtgcttg cccatcttct cggcggcgtg ggccagcgtg tagtcgagcc
     5761 acttcttgtt cttctcgagc cggggtccga cgatggcgat ctgcggcagc gggccgactg
     5821 cggtgattgg cagcttttca cgcaagcccg gtcggcgcgc cggatcggcg agcttggcca
     5881 ggcgctcctc gcgcgttccc gtggtggcct cgcaccaggg ctgggaatcg tcgaacaggt
     5941 tccagtcctc gaaagtgaag gtgaagcccg cgtcggtcgt cagcccctgg ccgaccaccc
     6001 ggatgccccg ctcgcgacag ctcttcagcc aggcgagcac gcggcgatga atctcgggcc
     6061 ggtgatcgaa agcctggatc acgttcatga tcaccggccg gccgctgatc gtggcgacct
     6121 cttcgtaaaa cgcgcggtcg cgagcgttgt cgcccgagac cagcagcatc tgcacgaagc
     6181 cgtcgttgcg ctcggccaat acccgcgcca actcgcggca ggtctcgtcg tgcatgacgt
     6241 cggtcggcat cgccgacccg tcgtagtcgc gctgcaccgc cgccggcccg gtcggcaaca
     6301 tgcgctgggc cgaccagccg caggcgccgg catccatggc ttcgtgcagc aagcgcctca
     6361 gctcggcgtg ctgctcggca gtcggcagct tgcccgcctt ggccgcctcg aaacccatga
     6421 cccagatcaa gagcggcgag atcggcatgt agggcaggat gttgaccgcc ttgggcgccg
     6481 cctcgacgct gtcgaggaac tcggatcgac gaagcccggc gccacgatca ggccgccggc
     6541 atcgatcgtc tcgtcggcct cgctgccggc gatatggcct atctcggcga tccggccgtc
     6601 cttgatgccg atatcgccgc gaaaacgggg caaccggctg ccgt
//
LOCUS       DASWGA010000667         3138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1846307, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000667 DASWGA010000000
VERSION     DASWGA010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1846307"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..1040
                     /locus_tag="VF991_15545"
     CDS             69..1040
                     /locus_tag="VF991_15545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9557907.1"
                     /translation="MLRRSILALLAIASAAPALGQSYPSKPITMIVPFAAGGPTDITA
                     RIVGERMGKELGQQIIIDNVTGAAGTIAMGKLAHAAPDGYTIGIGHVGTNVVNGIIYK
                     NLNYDLLGDLVPVARLPSNPLLVVTSNQVPAKDMKELVAYLKANADKVSGGTAGMGSG
                     SHIGVLAFHAGTGTSYQLVPYRGTGPAVQDLIANQIQIMIDQSSNSLPHVRAGKIRAY
                     AVASKERSAAAPDIPTTAEAGFPGIEVTIWQGLWAPKGTPADIVAKLNAAAVAALKDP
                     EVRRKLEDLGQDMPTPEQMQPAAFDAFQRAEFAKWKPIIEKANVKVE"
     gene            complement(1053..2489)
                     /locus_tag="VF991_15550"
     CDS             complement(1053..2489)
                     /locus_tag="VF991_15550"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9557908.1"
                     /translation="MDPCFETATRLARAIRNGRLSSREVTEAHLDRIARLNGPLNALV
                     VVDGERARQAARAADRRKNASLGPLHGVPITIKEAFDVKGLATTSSHPPLKGNIARAD
                     ASLVGRLRAAGAVILGKTNVPELCADFQTDSPLFGTTKNAWDTRRTAGGSTGGGAVAV
                     AARLSPLELGSDIGGSVRNPAHYNGIFALKPTEWRVPGHGHVPDLPSRTRTTRYMGVF
                     GPLARSVEDLQTALSIIAGPDGHDAEAAPVPLGAVPALKAKDLRIAVVESNPLVTVSA
                     DTASVVQATVRLLAKAGAKVKRAEPEGLDWRQGWDDWSDLFLYQVRALQPLSERERTF
                     AAGESADPSTRSAARTARLDLAEFFAVLDRRDRIMRQCEAFLDDYDAWLMPVMPDAAF
                     IRQKQSAPLRIDGVEHPYFFAGTSYNYLANLTGQPSIVLPCGLSREGLPIGLQLTGKR
                     WGDARLLGIAKVLEKLLPPCPVPPDYAS"
     gene            2571..>3138
                     /locus_tag="VF991_15555"
     CDS             2571..>3138
                     /locus_tag="VF991_15555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9557909.1"
                     /translation="MSLGSKTLFITGASRGIGLAIALRAARDGANIAIAAKTVKADPR
                     LPGTIFTAAQEIEKAGGKALPLPCDIRDEQSVDKAVAETVAKFGGIDIVVNNASAISL
                     TGTLATPMKRYDLMHQINSRGTFLVSQKCIPHLLKAANPHVLNLSPPLDFDVKWFAGH
                     SAYTLAKFGMSIYAWAMAAEFKGDAQGKG"
BASE COUNT          544 a         1071 c         1034 g          489 t
ORIGIN      
        1 agcaattttg cgccacttcc gaacggtgcg actagtttca gctaatgaaa gacgttatgg
       61 gaggcttcat gctgcgccga tcgattcttg ccctgctcgc cattgcatcg gccgccccgg
      121 cgcttggcca gtcctatccc agcaagccga tcaccatgat cgtgccgttc gcggccggcg
      181 ggccgaccga catcacggcc cgcatcgtcg gcgagcgcat gggcaaggag ctgggccagc
      241 agatcatcat cgacaatgtc acgggcgcgg ctggcaccat cgccatgggc aagctcgcgc
      301 acgccgcacc cgacggctac acgatcggca tcggccatgt cggcaccaac gtggtgaacg
      361 gcatcatcta caagaacctg aactacgacc tgctgggcga tctcgtgccg gtggcgcgcc
      421 tgccgtccaa tccgctcctg gtggtgacct ccaaccaggt gccggccaag gacatgaagg
      481 agctggtcgc ctacctcaag gccaatgccg acaaggtctc gggcgggact gccggcatgg
      541 gttcgggctc gcatatcggc gtattggcgt tccacgccgg aaccggcacc agctaccagc
      601 tcgtgcccta ccgcggcacc ggccccgcgg tgcaggacct gatcgccaac cagatccaga
      661 tcatgatcga ccagtcgtcg aactcgctgc cgcatgtacg cgccggcaag atcagggcct
      721 atgccgtcgc ctccaaggag cgatcggccg ccgcgcccga catcccgacc acggccgaag
      781 caggcttccc cggcatcgag gtcacgatct ggcaggggtt gtgggcgccc aagggcacgc
      841 ccgccgacat cgtcgccaag ctgaacgcag cggcggtcgc ggcgctgaag gatcccgagg
      901 tccgccgcaa gctcgaggat ctcgggcagg acatgccgac gcccgagcag atgcagccgg
      961 ctgccttcga tgctttccag cgcgccgaat tcgccaaatg gaagccgatc atcgagaagg
     1021 cgaacgtcaa ggtcgagtga cgtcgcggcg gcttatgagg cgtaatccgg cggcacggga
     1081 caaggcggca acagcttctc cagcaccttg gcgatgccga gcagcctggc gtcgccccag
     1141 cgcttgccgg tgagctgcaa gccgatcggc aatccctcgc gcgacaagcc gcagggcagc
     1201 acgatcgagg gctggccggt caggttggcg agatagttgt acgacgtgcc ggcgaagaaa
     1261 tacggatgtt cgacgccgtc gatcctgagc ggcgcgctct gcttctggcg gatgaaggcg
     1321 gcgtccggca tcaccggcat caaccaggcg tcgtagtcgt cgaggaaggc ctcgcactgg
     1381 cgcataatgc ggtcgcggcg atcgagcacg gcgaagaatt cagcaaggtc gaggcgcgcc
     1441 gtgcgcgccg ccgagcgcgt cgacggatcg gccgactcgc cggcggcgaa agtgcgctcg
     1501 cgctcgctga gcggctgcag ggcacgcacc tgatagagga agaggtcgga ccagtcgtcc
     1561 cagccctgcc gccagtccag cccctcgggc tcggcgcgct tgaccttggc gccggccttg
     1621 gccagcaacc ggaccgtggc ctgcacgacc gaagccgtat cggccgacac cgtcaccagc
     1681 ggattgctct cgaccacggc gatgcgcagg tccttggcct tcagcgccgg tacggccccc
     1741 agcggcaccg gcgcggcctc ggcgtcgtgg ccgtcaggtc cggcgatgat gctgagcgct
     1801 gtctgcaaat cctcgaccga gcgcgccagc ggaccgaaca cgcccatgta gcgggtggtc
     1861 cgtgtccggc tcggaagatc cggtacgtga ccgtggccgg gcacgcgcca ctcggtaggc
     1921 ttcagtgcaa agatgccgtt gtagtgcgcc gggttgcgga ccgagccgcc gatgtcgctg
     1981 ccaagctcga ggggcgacag gcgcgccgcc acggcgacgg cgccgccgcc ggtcgagccg
     2041 ccggccgtcc gtcgcgtgtc ccaggcattc ttggtcgtgc cgaacagcgg gctgtcggtc
     2101 tgaaagtcgg cgcacagttc gggcacattg gtcttgccca ggatcaccgc accggccgcg
     2161 cgaaggcggc cgaccaggct tgcatccgcg cgggcgatgt tgcccttgag cggcggatgg
     2221 ctcgacgtgg tggccaatcc cttgacgtcg aacgcttcct tgatggtgat cggcacgcca
     2281 tgcagcggac ccagggaggc attcttcctg cggtcggccg cccgtgccgc ctgccgcgcg
     2341 cgctcgccat cgacgaccac cagggcgttg agcggcccgt tcagccgcgc gatccggtcc
     2401 aggtgcgcct cggtcacttc gcgtgaactc aggcggccgt ttcgtatggc gcgcgcaagc
     2461 cgcgtcgcgg tctcaaaaca cggatccatg catgtctccc ctgcgcactt ccgacactag
     2521 ccgcctcccc acgggccggc tatagagccc gaggtattct tggggacgcc atgagtttgg
     2581 gtagcaagac cctgttcata accggcgcca gccggggtat tgggctggcc atcgcgctac
     2641 gcgccgcgcg cgacggcgcc aacatcgcca tcgccgccaa gacggtgaaa gccgatccgc
     2701 ggctgcccgg cacgatcttc accgccgccc aagagatcga gaaggcgggc ggcaaggcgc
     2761 tgccgctgcc gtgcgacatc cgcgacgagc agagcgtcga caaagcggtg gccgagaccg
     2821 tggccaagtt cggcggcatc gacatcgtgg tgaacaatgc cagcgccatc agcctcaccg
     2881 gcacgctcgc cacgccgatg aagcgctacg acctgatgca ccagatcaat tcgcgcggca
     2941 ctttcctggt gtcgcagaag tgcatcccgc atttgctgaa ggccgccaat ccgcacgtgc
     3001 tcaacctctc gccgccgctc gacttcgacg tcaaatggtt tgccggtcac tcggcctaca
     3061 cgctcgccaa gttcggcatg tcgatctacg cttgggcgat ggcggcggag ttcaaaggtg
     3121 acgctcaggg taaggggg
//
LOCUS       DASWGA010000668         2677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_713524, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000668 DASWGA010000000
VERSION     DASWGA010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_713524"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VF991_15560"
     CDS             <1..212
                     /locus_tag="VF991_15560"
                     /inference="COORDINATES: protein motif:HMM:NF024265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TOBE-like domain-containing protein"
                     /protein_id="HEX9557910.1"
                     /translation="RDLVVAEGASDAIAARVAALRRSGPARHAELVLAEGLPTVEIEL
                     PLDCAVARGDVLAVKLATIRLFASR"
     gene            complement(280..1491)
                     /locus_tag="VF991_15565"
     CDS             complement(280..1491)
                     /locus_tag="VF991_15565"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9557911.1"
                     /translation="MSGHLPLAGLRVLDLASFIAGPVATTVMGDYGAEVIKIEPPGEG
                     DPQRKLGQAHSVPQHPVNFCWHLANRNKKAVVLDLKHQEGRAVFDRLLATADVMVVNF
                     PLKVRTRLKMRYSDVASFNPRLIYASMTGYGETGPDAEQPGFDSTAFFARSGLLDGLT
                     HWGGPPAFSLPGQGDLVAGMNLFAAIAMALLHRQRTGEGSEVSTSLHASGLWSNGILA
                     QGALLDAYVAPRPPRTQPRSALANQYRTSDGRWIQLTIVREDKLWPELCKALERVDLL
                     ADPRFQTTESRRAHATELAAILDPIFANHPWPEWRKRLRHHEITFGLLGVLRDVPHDH
                     QAVANGAVVESGIPDMPRTISAPIRLSFAPEPSTPGPGPALGQHTDELLDELGYSRAE
                     IGKLRAAGALG"
     gene            1618..>2677
                     /locus_tag="VF991_15570"
     CDS             1618..>2677
                     /locus_tag="VF991_15570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557912.1"
                     /translation="MALRSAMWACLLAAVLGFAGVVLFRGNRWRTGALLAAALALSLA
                     MLDAFAGWLSPAPMGYGLVRTTVPRWWPPPHPILGFRPKPDSEVLGTATFGPETLYRQ
                     TYHFDADGARVTPPAPAGADTYLFIGDSFIFGQGLPDDQTLAAQFAKVTDLKVRAVNL
                     GVPGNALNHLVRAFEAGLLDRYASQRVKAVVTWIIPAQLARVTGDGSWLGSSPRYELD
                     NGALRHTGSFNEYRLLHPIAGAKYFLGEQFAFIDAIGMKQRQEQQVELFVAMLVRLQQ
                     YARDKFGAPLIVLYAWPDETSRPGFGVSEFAQPWLVEILDRLGKLGIPLLSVNALTSP
                     FPASRVTIREDGHPNGFTN"
BASE COUNT          392 a          917 c          897 g          471 t
ORIGIN      
        1 cgcgcgatct cgtcgtggcg gaaggggcga gcgatgcgat cgccgcccgc gtcgccgcgc
       61 tccgtcgcag cggcccggcg cgccacgccg agctggtact ggccgaaggc ctgccgaccg
      121 tcgagatcga gctgccgctc gattgcgccg tcgccagggg cgacgtgctg gccgtcaagc
      181 tcgcgacgat ccggctgttc gcatcgcgtt agcgcagggt gtcctcccga gcgcagcgag
      241 ggacctttcg cgacgggatg acagcgtttt attaacccgt caccccaacg caccggcggc
      301 ccgcagcttg ccgatctccg cgcggctata acccaattcg tcgagcagct cgtcggtgtg
      361 ctggccaagc gccggtccgg ggccgggtgt gcttggttcg ggcgcgaagg aaagccggat
      421 cggcgcggag atcgtgcgcg gcatgtcggg gatgccgctc tcgaccaccg cgccgttggc
      481 gacggcctga tggtcgtgcg gcacgtcacg caggacgccg agcaggccga aggtgatctc
      541 gtgatggcgc aggcgcttgc gccattcggg ccagggatgg ttggcgaata tcggatcgag
      601 gatggccgcc aactcggtgg cgtgggcacg ccggctctcg gtcgtctgga agcgcgggtc
      661 agccaaaaga tcgacacgct ccaacgcctt gcagagctcg ggccacagct tgtcctcgcg
      721 cacgatggtg agctggatcc agcggccgtc tgacgtgcgg tactggttgg cgagcgcgct
      781 tcgcggctgg gtgcgcggcg ggcggggcgc cacataggca tcgagcagcg cgccctgcgc
      841 caggatgccg ttcgaccaca ggcccgaggc gtgcagcgag gtgctgacct cgctgccctc
      901 gccggtgcgc tggcgatgca acagcgccat ggcgatggcg gcgaacaggt tcatgccggc
      961 caccaggtcg ccctgcccgg gcagcgagaa ggcgggcgga ccgccccagt gggtgaggcc
     1021 gtcgagcagg cccgagcggg cgaagaacgc cgttgaatcg aagcctggct gctcggcgtc
     1081 ggggccggtc tcgccatagc ccgtcatcga ggcatagatc aggcgcgggt tgaaggacgc
     1141 cacgtccgaa tagcgcattt tcagccgcgt gcgcaccttc agcgggaagt tcaccaccat
     1201 cacgtcggcc gtcgcgagca gccggtcgaa caccgcgcgg ccttcctggt gtttcaggtc
     1261 gagcaccacc gccttcttgt tgcggttggc caggtgccag cagaaattga caggatgctg
     1321 cggcaccgaa tgggcttggc ccagtttgcg ctgcggatcg ccctcgcccg gcggctcgat
     1381 cttgatcacc tccgcgccgt agtcgcccat caccgtcgtc gcgactggcc ccgcgatgaa
     1441 gctcgccaga tccaggaccc gaaggccggc cagcggcaga tgcccgctca ttgatgtttt
     1501 cctttcgaac ccttacaccc gaccctactc ccgggaggca tcttcaggtc aatggccggc
     1561 gtcggtcgaa atttctggct ttcagcgctt ttgatagcag gcctcgtggc aggcgcggtg
     1621 gcgcttcggt cggcaatgtg ggcgtgcctt ctggcagccg tgctgggatt tgccggcgtc
     1681 gtgctgtttc gcggcaaccg ctggcgcacc ggcgctctgc tggcggcggc tctggcgctc
     1741 agcctggcaa tgctcgatgc cttcgccggc tggctgtcgc ccgcgccgat gggctacggc
     1801 ctggtgcgca ccacggtgcc gcgctggtgg ccgccgcccc atcccatcct gggctttcgc
     1861 ccgaagcccg acagcgaggt cctcggcacc gccaccttcg gccctgaaac gctctatcgc
     1921 cagacctatc acttcgacgc cgacggcgcg cgcgtgacgc cgccagcgcc ggccggcgcc
     1981 gacacctatc ttttcatcgg cgactctttc atcttcggcc agggcctgcc cgatgatcag
     2041 actctggcgg cgcagtttgc caaagtgacc gatctcaagg tgcgtgccgt caatctcggc
     2101 gtgccgggca acgccctgaa ccatctggtg cgcgccttcg aggcagggct gctcgatcgc
     2161 tatgcctcgc agcgggtcaa ggcggtggtg acctggatca ttccggcgca gcttgcgcgc
     2221 gtcaccggcg acggatcgtg gctcggctct tcgccgcgct acgagttgga caacggcgcg
     2281 ctgcgccata ccggctcgtt caacgaatat cgcctgctcc atcccatcgc cggcgccaag
     2341 tacttcttgg gcgagcagtt cgccttcatc gatgccatcg gcatgaagca gcgccaggag
     2401 cagcaagtcg agctgttcgt ggccatgctg gtccgcctgc agcaatacgc ccgcgacaag
     2461 ttcggcgcgc cgctgatcgt cctctatgcc tggccggacg agacctccag gccgggtttc
     2521 ggcgtctccg agttcgccca gccctggctg gtcgaaatcc tcgatcggct gggcaagctc
     2581 ggcatcccgc tgctctcggt caatgccttg accagcccgt ttcccgcctc ccgggtgacc
     2641 attcgcgaag acggccatcc caacggcttc accaatg
//
LOCUS       DASWGA010000669         3471 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_713671, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000669 DASWGA010000000
VERSION     DASWGA010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3471
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_713671"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VF991_15575"
     CDS             <1..381
                     /locus_tag="VF991_15575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557913.1"
                     /translation="ALSGVMTVALSLVPYSAAYIADAGADAMRQLRAGSSLGALLFLP
                     NLTRAFFVLVMSSSAAAAIGVTEGITVILRHAEQLPALGDRLVLFATGIVLFGIPLQA
                     GFAIMSVIQRRLSLKVARPPADAA"
     gene            495..1016
                     /locus_tag="VF991_15580"
     CDS             495..1016
                     /locus_tag="VF991_15580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEX9557914.1"
                     /translation="MPIGRFFCSLAVLTAGCLASLAAEAQTAKASLKDAGGKDVGQVQ
                     LVQTPQGVLLKLAVKGLPAGEHAFHVHAVGKCEPPFTSAGPHFNPGGKKHGMEAADGA
                     HAGDMPNLHIPASGELVVEVANPMISLVKGQPATVFDADGSAIIIHAGADDYKTDPAG
                     NAGDRIACGVIVE"
     gene            1122..1571
                     /locus_tag="VF991_15585"
     CDS             1122..1571
                     /locus_tag="VF991_15585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HEX9557915.1"
                     /translation="MSKEQENKALVGRWFTEFWGNPWNPKVIEELAAPDMLLQYSLHA
                     PRRGRDDVRDFMTGFRRAFPDLAFGGAADLLAEGDYVVGRWIGGGTHTGPAFDDFLIG
                     ALPAASGRKMRFTGTTVIRVEDGRIAEEIGLDDGVTALTQLGLLRAA"
     gene            complement(1672..2559)
                     /gene="fdhE"
                     /locus_tag="VF991_15590"
     CDS             complement(1672..2559)
                     /gene="fdhE"
                     /locus_tag="VF991_15590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HEX9557916.1"
                     /translation="MNQVGVKAPDALILPDPATRFARTAARLDSLSAGHPMQEWLRFM
                     ARLAEVQHAVAGAMTPIAGPDAAAVAQAVDARLPPLAADGHRRDPTWRDGLVLLLDGL
                     NHSVMPATARLVMDSLRARRAESVEALADDFLHGCVDIADAGAALYVAAALQVYFTRL
                     AASLPASSLRLLPQRGLCPCCGSTPVAGVVTEAGPTRGARYLHCSLCATAWNHVRAVC
                     ITCGQSRAVSLKEIEGDRGAVKAETCDDCHTYAKMLYQAHDTKVDPFADDLATLGLDV
                     LVAEAGWPRHAPNPLLLVG"
     gene            complement(2556..3209)
                     /locus_tag="VF991_15595"
     CDS             complement(2556..3209)
                     /locus_tag="VF991_15595"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HEX9557917.1"
                     /translation="MRRPPGTLIRNTTAARINHWITAGCFVLLLLSGLSMFDPMLFWL
                     SALFGGGQLTRAIHPWIGTVLLVSYAGMIVQFWRDNTWNRDDIAWLRAVERVVSNDED
                     RVPEVGRFNAGQKAVFWAMALLVPVLFVTGIAIWEIYFSAYTTIEQRRIAVLIHSLAA
                     VATIIVWIVHVYAALWVRGSVRTMTQGYVTPGWAWRHHRKWLRRLAASGSAGPRPRP"
     gene            complement(3206..>3471)
                     /locus_tag="VF991_15600"
     CDS             complement(3206..>3471)
                     /locus_tag="VF991_15600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="formate dehydrogenase N subunit beta
                     transmembrane domain-containing protein"
                     /protein_id="HEX9557918.1"
                     /translation="GVGGTHVMYVLHHADRPSLYAGLPDKPRISPFVDAWKGLLKPLA
                     LAGIAFTALAGFFHWVVVGPNEVQPEDEAQAQREMRAAKEDRT"
BASE COUNT          579 a         1191 c         1155 g          546 t
ORIGIN      
        1 gcgctgagcg gcgtcatgac cgtggcgctg tcgctggtgc cctattcggc cgcctacata
       61 gccgatgccg gcgccgacgc gatgcgccag ctccgcgccg gctcgagctt gggcgccctg
      121 ctgttcctgc ccaacctcac gcgcgccttc ttcgtgctgg tcatgtcgtc gagcgcggcg
      181 gcggcgatcg gtgtgaccga gggcatcacg gtgatcctgc gccacgccga gcagctgccg
      241 gcgctcggcg accggctggt gctgtttgcg acgggcatcg tcctgttcgg catcccgttg
      301 caggcaggct ttgccatcat gagcgtcatc caacgccgcc tcagtcttaa ggtcgcgcgc
      361 ccgccggccg acgcggcgtg atgcatgcgc gcccgggccg gcgcattgcc aggccgttca
      421 acggctttcc gctgtatcgg ccaaccaagg tgctggggta ggctcacccg gcacaaagcg
      481 aatgggagag gaccatgccg atcggccgat ttttctgcag cctcgccgtc ctgacggcgg
      541 gatgtcttgc atcgcttgcc gccgaggccc agaccgccaa ggcgtcgctc aaggatgccg
      601 gcggcaagga cgtcggccag gtccagctcg tccagacgcc gcagggcgtt ctgctcaaac
      661 tggcggtgaa gggacttccg gcgggcgagc acgccttcca cgttcacgcc gtcggcaagt
      721 gcgaaccgcc cttcaccagc gccggacctc atttcaatcc gggcggcaag aagcatggca
      781 tggaggcggc cgacggcgcg cacgccggcg acatgcccaa cctgcacatt cccgccagcg
      841 gcgagctggt cgtcgaggtc gccaatccca tgatctcgct cgtcaagggc cagcctgcca
      901 cggtgttcga tgccgacggc tcggcgatta tcatccatgc cggcgccgac gattataaga
      961 ccgatccggc cggcaacgcc ggcgaccgca tcgcctgcgg cgtcatcgtc gaatgagctg
     1021 acacagccgt tctaattcgc ggcggcaggc ggatatttcc tggagcgttg gtgtcgtaca
     1081 tcgcctcgcg cgtaacgcca ccaacacgaa gggatcttgc gatgtccaag gaacaggaaa
     1141 acaaggcgct cgtcggccgc tggttcacgg aattctgggg caatccctgg aaccccaagg
     1201 tgatcgaaga gctcgccgcg cccgatatgc tcctgcagta ttcgctgcac gccccgcgtc
     1261 gcggccgtga cgacgtgagg gatttcatga ccggctttcg ccgggccttt cccgacctcg
     1321 ccttcggcgg cgcggccgat cttttagccg agggcgacta tgtcgtcggc cgctggatcg
     1381 gcggcggcac gcacaccggc cccgccttcg atgacttcct catcggcgcg ctgccggcgg
     1441 cgtccggccg caagatgcgc ttcaccggca cgaccgtgat ccgcgtcgag gacggcagga
     1501 tcgccgagga gatcggcctc gacgacggcg tgacggcgct gacgcagctc ggtctccttc
     1561 gcgccgcctg atcggacgag gcttcatgct cctctccccc agcgccttct gaggcgcggc
     1621 taagggggag aggacgggtg aggggggaga ggaacgtgac gtgcagccgc gctacccgac
     1681 gagcaacaac ggattgggcg cgtggcgcgg ccagcctgcc tcggcgacca ggacatcgag
     1741 gcccagtgtc gccaggtcgt cggcgaacgg gtcgaccttc gtgtcgtgcg cctggtaaag
     1801 catcttcgca taggtgtggc agtcgtcgca cgtctcggct ttgactgcgc cgcgatcgcc
     1861 ctcgatttcc ttcagcgaca cggcgcgcga ctggccgcag gtgatgcaaa cggcgcgcac
     1921 gtgattccag gcggtggcgc agagcgagca atggaggtag cgcgcgcccc gcgtcgggcc
     1981 ggcttcggtg accacgcccg ccaccggtgt cgagccgcag caggggcaga gcccgcgttg
     2041 cggcaacagc cgcaaggacg acgccggcaa cgacgcggcc aggcgggtga aatagacctg
     2101 cagcgccgcc gccacataga gagcggcgcc ggcatcggcg atgtccacac agccgtgcag
     2161 gaagtcatcc gccagggctt ccacgctttc ggccctgcgg gcgcgaaggc tgtccatgac
     2221 caaccgcgcc gtcgccggca tcacactgtg gttgagacca tcgagcaaca ggaccagacc
     2281 atcgcgccat gtcgggtctc gccgatgtcc gtccgcagca agcggcggca ggcgcgcgtc
     2341 gactgcctgc gccaccgcgg ccgcgtccgg accggcaatg ggggtcatcg cgccggcgac
     2401 ggcgtgctgg acctcagcga gccgcgccat gaagcgcagc cactcttgca tcggatggcc
     2461 ggccgacagc gagtccaagc gagctgccgt gcgcgcgaac cgcgtggccg gatcgggcag
     2521 gatcagcgcg tccggcgctt ttacgccgac ctggttcatg gccgtggccg tggcccggcc
     2581 gagccgctcg ccgccaggcg ccgcagccac ttgcggtgat ggcgccacgc ccagccggga
     2641 gtcacatagc cctgcgtcat cgtccgcacc gagcccctga cccagagcgc cgcatagacg
     2701 tggacgatcc agacgatgat cgtcgccacc gccgccaggc tgtggatcag gacggcgatc
     2761 ctgcgctgct cgatcgtcgt ataggcggaa aaataaatct cccagatcgc gatgcccgtg
     2821 acgaagagca ccgggaccaa caacgccatc gcccagaaca ccgccttctg tccggcattg
     2881 aagcggccga cttcgggcac tcgatcttcg tcgttgctca ccacgcgctc gacggcgcgc
     2941 agccaggcga tgtcgtccct gttccaggtg ttgtcgcgcc agaactgcac gatcatgccg
     3001 gcgtagctca ccagcagcac ggttccgatc cagggatgga tggcccgcgt caactggccg
     3061 ccgccgaaca aggctgagag ccagaacagc atcgggtcga acatcgacag gccggacagc
     3121 agcagcagaa cgaagcagcc cgcagtgatc caatggttga tgcgggccgc ggtggtattg
     3181 cggatcagtg tccccggagg ccgcctcatg tgcgatcctc cttcgcggct cgcatctcgc
     3241 gttgggcctg cgcttcgtcc tccggctgca cttcgttggg tccgacgacg acccagtgaa
     3301 aaaatccggc gagggcagtg aaggcgatgc cggccagcgc cagtggcttc aacagtccct
     3361 tccaggcatc gacgaaagga ctgatgcgcg gcttgtccgg caagccggca tagagcgacg
     3421 gccggtcggc gtggtgcagc acgtacatca catgcgtgcc gccgacgccc g
//
LOCUS       DASWGA010000670         7905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1088048, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000670 DASWGA010000000
VERSION     DASWGA010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7905
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088048"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VF991_15605"
     CDS             complement(<1..582)
                     /locus_tag="VF991_15605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9557919.1"
                     /translation="MPDAPLPTGSANQFVRLSGLKRYFDVSAPWLVRVLEGRPRQIVQ
                     AVDGVDIEIAKGETFSLVGESGCGKSTVARLVVGLYSPTAGSIEFDGNDMAGRRSGAD
                     MAALRRRMQMIFQDPYASLNPRWRVFDIIAEPIRAFGLSSGKADLEKRVGELLRQVRL
                     TPADGRKYPHEFSGGQRQRISIARALASRPEFLV"
     gene            complement(575..1594)
                     /locus_tag="VF991_15610"
     CDS             complement(575..1594)
                     /locus_tag="VF991_15610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557920.1"
                     /translation="MTTSNNPPLLEVKNLRVEFPTRRGTLLAVDDVSFDIAPGEVLGV
                     VGESGAGKSLTGNAIIGLLEPPGRIASGEIRLEGRRIDNLPYEEMRKVRGARIGAIFQ
                     DPLTSLNPLYSIGRQLIETIQTHLPLSAAEARRRALDLLKEVGIPAAESRIDHYPHQF
                     SGGMRQRVVIALALCAGPRLIVADEPTTALDVSIQAQIIALLKRLCREHGTAVMLVTH
                     DMGVIAETADRVAVMYAGRIAEIGPVRDVVKHAKHPYTKGLMGSIPSLGVRHDRLTQI
                     DGAMPRLTEIPPGCAFNPRCTFRGQRCLVERPDLMSAGTSRAACWLHDRGGVGAPVVK
                     ELADA"
     gene            complement(1704..2639)
                     /locus_tag="VF991_15615"
     CDS             complement(1704..2639)
                     /locus_tag="VF991_15615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008188696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557921.1"
                     /translation="MATRWALGGWLHRVTDSDVWWSFKSSPMTVTAAAATFFIIAVAF
                     LSPVLAPHTPFDPATLSLSDGLKPPVLLSSDGDWTFPLGTDDQGRDILSSIMYGTRLS
                     LEVGFASVIVAMVLGIGLGLVSGYIGGTVDAVIMRIADVQLTFPAILVALLIDGVVRG
                     IISVQRHDEIALFVIVGAIGLSFWVQYARTVRGSVMVEKNKEYVQAARVIGLSPILIM
                     VRHVLPNVTGPVLVIATINLGLAIITEATLSFLGVGLPSTEPSLGTLIRLGNEVLQSG
                     DWWITVFPGITLAALVLAVNLLGDWLRDALNPKLR"
     gene            complement(2641..3633)
                     /locus_tag="VF991_15620"
     CDS             complement(2641..3633)
                     /locus_tag="VF991_15620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9557922.1"
                     /translation="MLAFILRRLLQSIAVLLTVGFVAFSLFRYVGDPINAMVGQDTTM
                     EQRDELRTKLGLNDSPPIQFARFIYNASRGNFGLSYRTSEPVGRLILERVPATLELSF
                     CAALFALFVGVPMGVYTGLYPNHWSSRLFQAVSLIGISLPTFLIGILLILVFAVSLHW
                     LPSFGRGETVQIGWWTTNFLTVSGLKALILPSITLGLFQLTLIMRLVRSEMLEVMRTD
                     YIKFARARGLANRVINFGHALKNTLVPVITVAGLQLGALIAFAIVTETVFAWPGVGQL
                     FIQSVQFSDIPVMAAYLLLIGLLFVLINLVVDLLYFAVDPRLRAEGGGARVAGH"
     gene            complement(3848..5461)
                     /locus_tag="VF991_15625"
     CDS             complement(3848..5461)
                     /locus_tag="VF991_15625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557923.1"
                     /translation="MNFSLRHCFALAAVACAGLAVTPAADAKTFKWANSGDVSSMDPY
                     ARQETFLLTFTANIYDPLIRRDKNLKLEPALATKWGQSDPTTWFFDIRPNVKFHDGST
                     LTADDVVFSLNRANGPGSNMQSNFVSVKEIKKAGDLRVEVTTKYPDPLLADKWAALSI
                     MSKPWAEKNNAVNSADMTKNEENFATRNAMGTGPFMLKERRAGEKTILVVNPNWWDKP
                     AHNLTEVIFTPVANAATRVAALKSGDIDMMYEVPPADTESLKKEANVAVLEGPETRVV
                     FLGFDQERPELLESNIKGKNPFKDKKVREAIHRSIDVDAIKRTVMRGQSFPTNLMVAP
                     GINGYMKDLDKRPALLKPDEAKKMLADAGYPNGFEVGMDCPNDRYVNDEKICQAAVAM
                     LAKIGVKVNLRAQTRNLYFAKILRKNDLSPGETSFYMLGWSPAQTYDVHNVFEALIQT
                     PNKATKKGQFNAGGYSNPKLDALADKMEQETDKAKRDAEIAEATKLYVDDFAYIPLHQ
                     QAVVWAARKNIDLVQPADNSFPLRFVTVK"
     gene            5673..7082
                     /locus_tag="VF991_15630"
     CDS             5673..7082
                     /locus_tag="VF991_15630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006204576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX9557924.1"
                     /translation="MNDVSRSFRGNSNAARDIAHHLHPYTNFKKHEATGPLTIVRGRG
                     VYVMDDDGKEYIEGMAGLWSAALGFSNERLATVAYEQMKQLPFYHAFNQRSHEPAINL
                     AEKLKAMAPVAMSKVFFANSGSEANDTVVKMVWYMNNALGRPQKKKIVSRIKGYHGVT
                     VAAASLTGLPNNHRSFDLPIPGILHTTTPHYYRGAKDGETEEQFATRCAQELEELIIR
                     EGGADQVAAMICEPVMGAGGVIVPPKGYYEKIQAVCRKYDMLFVADEVICGFGRTGNV
                     WGCQTLNIKPDILTCAKALSASFLPISAVMVNEKVYQALMSESDKIGTWGHGFTYSGH
                     PVAAAVALEAQKIYDEIDLFGHAKRLSPIFQKHIQSFADHPLVGEAMGIGMVGALEIV
                     ADKKTKAPFDLVAVGAGNRVYNQAVARGLFIRNMGDRVAICPPLIINETELADLFGRL
                     RQAFDAALDELKSEGHFKG"
     gene            7084..7437
                     /locus_tag="VF991_15635"
     CDS             7084..7437
                     /locus_tag="VF991_15635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557925.1"
                     /translation="MQSGPGNDGGRPGRAPPLGTSQRIRNRAIWAVALFAASVPPAFV
                     GLGDAERNTDLLEVALMLALAFWTIGLLFAVWTAFPTLRYWDGLPVQTRWLGALPLLS
                     VSLFLSAALIAALFA"
     gene            7592..>7905
                     /locus_tag="VF991_15640"
     CDS             7592..>7905
                     /locus_tag="VF991_15640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9557926.1"
                     /translation="MDYEAFFAGHLRRLHDEGRYRVFAELERIVGAFPRARLHRDGEP
                     PRDVTVWCSNDYLAMGQHPDVVAAMRTAIDAQGSGAGGTRNISGTNTLHAQLERELAL
                     LHG"
BASE COUNT         1391 a         2555 c         2639 g         1320 t
ORIGIN      
        1 caccaggaat tccggccggc tggcgagcgc gcgggcgatc gagatgcgct ggcgctggcc
       61 gcccgagaat tcgtgcggat acttgcggcc gtcggccggc gtgagccgca cctggcgcaa
      121 cagctcgccg acccgcttct cgaggtcggc cttgccgctc gacaggccaa aggcgcggat
      181 cggttcggcg atgatgtcga acacccgcca gcgcggattg aggctggcat aggggtcctg
      241 gaagatcatc tgcatgcgcc ggcgcagcgc ggccatgtcg gcgccgctgc gccgcccggc
      301 catgtcgttg ccgtcgaact cgatcgaccc cgcggtcggc gaatagagcc cgaccaccag
      361 gcgcgccacc gtcgacttgc cgcagcccga ctcgcccacc agggaaaagg tctcgccttt
      421 ggcgatctcg atgtcgacgc cgtcgaccgc ctgcacgatc tggcgcggcc tgccctcgag
      481 gacgcgcacc agccacggcg ccgacacgtc gaaatagcgc tttagccctg acaggcggac
      541 gaactgattg gcgctgccag tcggcagagg ggcgtcaggc atcggccagt tccttgacga
      601 ccggcgcgcc gacgccgccg cgatcgtgca gccagcaggc ggcgcggctg gtgccggccg
      661 acatcaggtc gggccgctcg acgaggcagc gctggccgcg gaaggtgcag cgcggattga
      721 aggcgcagcc cggtgggatc tcggtgagcc gcggcatggc gccgtcgatc tgggtgagcc
      781 ggtcgtggcg cacgccgagg ctcgggatcg agcccatcag tcccttggtg tagggatgct
      841 tggcgtgctt gaccacgtcg cgcaccggcc cgatctcggc gatgcggccg gcatacatca
      901 ccgccacgcg atcggcggtc tcggcgatca cgcccatgtc gtgggtcacc agcattaccg
      961 ccgtgccatg ctcgcggcac aaccgcttca agagggcgat gatctgcgcc tggatggaga
     1021 cgtcgagcgc cgtcgtgggc tcgtcggcca cgatcaggcg cggcccggcg cagagcgcca
     1081 gcgcgatcac cacccgctgg cgcatgccgc cggagaactg gtgcggataa tggtcgatgc
     1141 ggctctcggc ggccggaatg ccgacctcct tcaggaggtc gagggcgcga cggcgcgcct
     1201 cggcggccga caagggcaga tgggtctgga tggtctcgat cagctggcgg ccgatcgaat
     1261 agagcgggtt gaggctggtc agcgggtcct ggaaaatggc gccgatccgg gcgccgcgca
     1321 ccttgcgcat ctcctcgtag ggcaggttgt cgatgcgccg tccttcgagc cggatctcgc
     1381 ccgaggcgat gcggcccggc ggctcgagca ggccgatgat ggcgttgccg gtcagcgact
     1441 tgccggcgcc ggactcaccg acgacgccca aaacctcgcc gggcgcgatg tcgaacgaca
     1501 catcgtcgac cgccagcaag gtgccgcgcc gggtcgggaa ctcgacgcgg aggttcttca
     1561 cttcaagaag cggtgggttg ttggaggtag tcatcgggtc ttttggaccg cgcgcgtccc
     1621 gcgcgctctt gagcctgagc gcgcggaacc cttcggcaag ctcagggcaa gctgcgggcg
     1681 gtccggaaaa gcatgagcgt acttcatcgc agcttcggat tcagcgcgtc gcgcagccag
     1741 tcgcccaaaa ggttcaccgc cagcaccagg gcggcgagcg tgatgccggg gaacacggtg
     1801 atccaccagt cgcccgactg cagcacctcg ttgccgaggc gaatcagcgt gccgagcgag
     1861 ggctcggtcg aaggcaggcc gacgcccagg aacgacagcg tcgcctcggt gatgatggcg
     1921 aggccgagat tgatggtggc gatcaccagc accgggccgg tgacgttggg cagcacgtgg
     1981 cggaccatga tcaggatcgg cgacaggccg atcacgcgcg cggcctggac atattccttg
     2041 ttcttttcga ccatcaccga gccgcgcacg gtgcgggcat actggaccca gaaggaaagg
     2101 ccgatggcgc cgacgatgac gaagagcgcg atctcgtcgt ggcgctgcac cgaaatgatg
     2161 ccgcgcacca cgccgtcgat cagcagggcc accaggatcg ccggaaaggt gagctggacg
     2221 tcggcgatgc gcatgatcac cgcgtcgacc gtgccgccga tatagccgct gaccaggccg
     2281 aggccgatgc ccagcaccat ggccacgatc accgatgcaa agccgacctc gagcgacagc
     2341 cgcgtgccgt acatgatgga cgacaggatg tcccggccct gatcgtcggt gcccagcggg
     2401 aaagtccagt cgccgtcgga tgacagcagc accggcggtt tcagcccgtc gctgaggctg
     2461 agcgtcgccg ggtcgaatgg cgtgtggggc gccagcacgg gcgagaggaa cgcgaccgcg
     2521 ataatgaaaa aggtcgccgc tgccgcggtc accgtcatcg gcgaggactt aaaactccac
     2581 cagacgtcgc tgtcggtgac ccgatgcagc catcccccga gcgcccaacg tgtcgccatg
     2641 tcagtggccc gccacgcgcg ctccgccgcc ttcggcacgc aggcgcggat cgacggcgaa
     2701 atagagcaga tcgaccacga gattgatcag cacgaacaac agcccgatca gcagcaggta
     2761 ggccgccatc accgggatgt cggagaattg caccgactgg atgaagagct ggccgacgcc
     2821 cggccaggca aagaccgtct cggtgacgat ggcgaaggcg atcagcgcgc ccaactgcag
     2881 gccggcgacg gtgatcacgg gcaccagcgt gttcttgagc gcgtggccga aattgatgac
     2941 gcggttggcg aggccgcggg cgcgcgcgaa cttgatgtag tcggtgcgca tcacctccag
     3001 catctccgag cgcaccaggc gcatgatcag ggtgagctgg aagaggccga gcgtgatcga
     3061 cggcaggatc agcgccttca gcccggacac ggtgaggaaa ttggtcgtcc accagccgat
     3121 ctgcacggtc tcgccgcggc cgaacgacgg cagccagtgc aggctgaccg caaagaccag
     3181 gatcaagagg atgccgatca ggaaggtagg cagcgaaatg ccgatcagcg acaccgcctg
     3241 gaacaggcgg ctcgaccagt ggttgggata aagaccggta tagacgccca tcggcacgcc
     3301 gacgaacagc gcgaacaggg cggcgcagaa cgaaagctcg agagtcgccg gcacgcgttc
     3361 caggatcagg cggccgaccg gctcggaggt gcggtaggac aggccgaaat tgccgcgcga
     3421 tgcattgtag atgaagcggg cgaactggat cggaggcgaa tcgttcaaac ccagtttggt
     3481 gcgcagctca tcgcgctgct ccatggtcgt gtcctggccg accatggcgt tgatcggatc
     3541 gccgacgtag cgaaacagcg agaaggcgac aaatcccacc gtcagcagca cggcgatgga
     3601 ttgcaggagt cgtcgcagga tgaaggcaag catttctggt cggtcggccc gggcgcagcc
     3661 ctagcaggat tggcgccaaa acggaacgcg cgtttccgcc aaactaatcc tcccctcaag
     3721 ttcctctccc ccgctagggg gagaggctag gtgaggggga atcgacgtgc gtggccccct
     3781 cacccaacct ctccccctag cgggggagag gagcctgagt cgaggaagga ggcgaaggag
     3841 ttggacctta cttcaccgtg acgaagcgca gcgggaagct gttgtcggcg ggctggacca
     3901 ggtcgatgtt cttgcgcgcc gcccacacca ccgcctgctg gtgcagcggg atgtaggcga
     3961 agtcgtcgac atagagcttg gtcgcctcgg cgatctcggc gtcgcgcttg gccttgtcgg
     4021 tctcctgctc catcttgtcg gcaagcgcgt cgagcttggg attcgagtag ccgccggcgt
     4081 tgaactggcc cttcttggtt gccttgttcg gggtctggat cagcgcctcg aagacgttgt
     4141 gcacgtcata ggtctgggcc ggcgaccagc caagcatgta gaagctcgtc tcgcccggcg
     4201 acaggtcgtt cttgcgcagg atcttggcga agtagaggtt gcgggtctgc gcccggagat
     4261 tcaccttgac gccgatcttg gccagcatgg cgacggcggc ctggcagatc ttctcgtcat
     4321 tgacgtagcg gtcgttgggg cagtccatgc cgacctcgaa gccgttggga tagccggcat
     4381 cggccagcat cttcttggcc tcgtccggct tcagcagcgc cggccgcttg tcgaggtcct
     4441 tcatgtagcc gttgatgccc ggcgccacca tcaggttggt cgggaaggac tggccgcgca
     4501 tcaccgtacg cttgatcgcg tcgacgtcga tcgagcggtg gatcgcctcg cgcaccttct
     4561 tgtccttgaa cgggttcttg cccttgatgt tggactcgag cagctcgggc cgctcctggt
     4621 cgaagcccag gaagacgacg cgcgtctcgg ggccttccag caccgccacg ttggcttcct
     4681 tcttgagcga ttcggtgtcg gccggcggca cctcgtacat catgtcgatg tcgcccgact
     4741 tcagcgccgc cacgcgcgtg gcggcattgg cgaccggcgt gaagatcacc tcggtgaggt
     4801 tgtgggccgg cttgtcccac cagttcggat tgacgaccaa aatggtcttc tcgcccgccc
     4861 ggcgctcttt cagcatgaac gggccggtgc ccatcgcgtt gcgggtggcg aaattctcct
     4921 cgttcttggt catgtccgcc gagttgaccg cgttgttctt ctcggcccac ggcttggaca
     4981 tgatgctgag cgccgcccat ttatcggcaa gcaatgggtc gggatacttg gtggtgacct
     5041 cgacgcgcag gtcgccggcc ttcttgatct ccttcaccga cacgaagttg ctttgcatgt
     5101 tcgagcccgg cccgttggcc cggttcagcg agaacacgac atcgtcggcg gtcagcgtcg
     5161 agccgtcatg gaacttcacg ttcggtcgga tgtcgaagaa ccaggtcgtc ggatcgctct
     5221 ggccccactt ggtggcgagc gccggctcga gcttcaggtt cttgtcgcga cggatcagcg
     5281 gatcgtagat gttggcggtg aaggtcagga ggaaagtctc ctgacgggca taggggtcca
     5341 tcgagctcac gtcgcccgag ttggcccact tgaaggtctt ggcatccgcc gccggcgtga
     5401 ccgcaagacc cgcgcaagcg accgccgcca gcgcaaaaca atgccgcaaa ctgaagttca
     5461 tcgtgttacc cctttgtggc gccacagccg tgttcgcgcc ttcggtctcc ccgacctttg
     5521 gagctatgcg caagcgcata cctcgatgca cgttgcaccg gctgtgagtt ggcgtcaatt
     5581 gcccaaattt tttgcatggc tgcatcagtt ggacagcccc gggctggggt cgctatcgtg
     5641 ccggtctcgc tattttttct cagggtgcgg tcatgaatga cgtctcacgc agcttccgcg
     5701 gcaactccaa cgcggcccgg gacatcgccc accacctgca cccctacacc aacttcaaga
     5761 agcacgaggc caccggcccg ctcaccatcg tgcgcggccg cggcgtctac gtcatggacg
     5821 acgacggcaa ggaatacatc gagggcatgg ccggcctgtg gtcggcggcg ctgggtttta
     5881 gcaacgagcg gctggcgacg gtggcctacg agcagatgaa gcagctgccg ttctaccatg
     5941 ccttcaacca gcgcagccac gagcccgcca tcaacctcgc cgagaagctg aaggcgatgg
     6001 cgccggtggc gatgtccaag gtgttcttcg ccaattccgg ctccgaggcc aacgacaccg
     6061 tcgtcaagat ggtgtggtac atgaacaatg cgctgggccg cccgcagaag aagaagatcg
     6121 tgtcgcgcat caagggctac cacggcgtca ccgtggcggc ggcgagcctc accggcctgc
     6181 ccaacaacca tcgctccttc gatctgccga tccccggcat cctgcacacc accacgccgc
     6241 actactatcg cggcgccaag gacggcgaga ccgaggagca gttcgccacg cgctgcgccc
     6301 aggagctcga ggaactcatc atcagggaag gcggcgccga ccaggtcgcc gccatgatct
     6361 gcgagccggt gatgggcgcc ggcggcgtca tcgtgccgcc caagggctac tacgagaaga
     6421 tccaggcggt gtgccgcaag tacgacatgc tgtttgtcgc cgacgaggtg atctgcggct
     6481 tcggccgtac cggcaatgtc tggggctgcc agacgctcaa catcaagccc gacatcctga
     6541 cctgcgccaa ggcgctgtcg gcgtcgttcc tgccgatctc ggcggtgatg gtgaacgaaa
     6601 aagtctacca ggcgctgatg agcgaaagcg acaagatcgg cacctggggc catggcttca
     6661 cctactccgg ccacccggtc gccgccgccg tcgccttgga ggcgcagaag atctacgacg
     6721 agatcgacct gttcggccac gccaagcggc tcagcccgat cttccagaag cacatccagt
     6781 cgttcgccga ccatccgctg gtcggcgagg cgatgggcat cggcatggtg ggcgccctgg
     6841 aaatcgtcgc cgacaagaag accaaggcgc cgttcgacct tgtagccgtc ggcgccggca
     6901 accgcgtcta caaccaggcc gtcgcgcgcg ggctgttcat ccgcaacatg ggcgatcgcg
     6961 tggcgatctg cccgcccctg atcatcaacg agaccgagct ggccgacttg ttcggccgtc
     7021 tgcgccaggc gttcgatgcg gcgctggacg agctcaaatc ggaaggccac ttcaagggct
     7081 gacgtgcaga gcgggccggg caacgacggc gggcgcccgg gccgggcgcc gccgctcggc
     7141 accagccagc gcattcgcaa tcgcgccatc tgggcggtcg ccctgttcgc cgcctcggtg
     7201 ccgccggcct tcgtcggcct gggcgacgcc gagcgcaata ccgacctgct cgaggtggcc
     7261 ttgatgctcg ccctggcctt ctggacgatc ggcttgctgt tcgccgtgtg gacggctttt
     7321 ccgacgctgc gctactggga cggcctgccc gtccagacgc gctggctggg cgccctgccg
     7381 ttgctgtcgg tctcgctgtt tctgagcgcc gccttgattg ccgcgctgtt cgcctgaagc
     7441 cgttctgcga ctgcgaagca ttcttaatta aaacgctcac gcgctcgtgt gtgggaatcc
     7501 acgacaaggc gcgtcaattc gcgaccaaaa tggtcaagaa caaatgacgc gagccgagta
     7561 acgtctggcc gacaggggga taaaagacgg aatggactac gaggcttttt tcgcgggtca
     7621 tctccgccgt ctgcacgacg agggccgcta ccgcgtgttc gccgagctgg agcgcatcgt
     7681 cggcgctttc ccgcgcgccc gcctgcaccg tgacggcgag ccgccgcgcg acgtgaccgt
     7741 gtggtgcagc aacgactatc tcgccatggg ccagcatccc gacgtcgtcg cggcgatgcg
     7801 tacggcgatc gacgcccagg gttcgggcgc gggcggcacg cgcaacattt ccggcaccaa
     7861 cacgctgcac gcccagctcg agcgcgagct cgcccttctg cacgg
//
LOCUS       DASWGA010000671         1637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_713798, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000671 DASWGA010000000
VERSION     DASWGA010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_713798"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1637)
                     /locus_tag="VF991_15645"
     CDS             complement(<1..>1637)
                     /locus_tag="VF991_15645"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9557927.1"
                     /translation="RSYRVAPGQRILIAGNGPLCLQTAAELLDGGANVVAVLEAAKRP
                     DLVQWRDLASAASADPLLLLQGVSLATRLGKRLHWGRQVTQLLGDDRVHRVVAGNLVF
                     DVDVVALNYGFASSSELARSLGCAHRFVPRGSGSMETLTDGDGRTSLGEVFAIGDGAR
                     FGGAHTALAQGALAAVAIARDLGLKAAEPKAAREALAGAARFQAALWRLFRAPPFDPS
                     AIADDAIVCRCEEVTAGTLRRLIAAGHNSPASLKRACRVGMGRCQGRYCAALVARLAS
                     DTVDEFGLFAPRPPAKPVPIRALSVEQAEWSGHEDFVPPDMARARDVVPLPAETVDTL
                     VIGGGVAGSCLAYWLAREGIETLVVERDDVNLQASGANAGSLHVQLLSFDFGDNAPPG
                     GNRAADTLPLGPASIALWQEIQRDTGKDLEIKITGGLMLAETERDVAFLKAKIGLEKS
                     RGIETELLGANELRRLEPAVGDVAIAAEWCPGEGKINPLLATYAVVARAKALGARFRR
                     GSNVQAIAREGAGYRITTSRGQIRARRIVNAAGPWAA"
BASE COUNT          248 a          574 c          595 g          220 t
ORIGIN      
        1 cggcggccca cggaccggcc gcgttgacga tgcgcctggc gcggatctgg ccgcggctgg
       61 tggtgatgcg atagcccgcg ccctcgcggg cgatcgcctg cacgttgctg ccccggcgga
      121 aacgcgcgcc cagcgccttg gcgcgcgcga ccacggcgta ggtcgcgagc agcggattga
      181 tcttgccctc gccagggcac cattcggcgg cgatggcgac gtcgccgacg gccggctcga
      241 gccgacgcag ctcgttggcg cctaaaagct cggtctcgat gccgcggctc ttctccaggc
      301 cgatcttggc cttgaggaag gccacgtcgc gctcggtctc ggccagcatc agcccgccgg
      361 tgattttgat ctcgagatcc ttgccggtgt cgcgctggat ctcctgccac agcgcgatcg
      421 acgccgggcc gagcggcaag gtatcggccg cgcgattgcc gccgggcggg gcgttgtcgc
      481 cgaaatcgaa cgacagaagc tgcacatgca ggctgccggc attggcgccg gaggcctgca
      541 ggttcacgtc gtctcgctcg accaccaacg tctcgatgcc ctcgcgcgcc agccagtaag
      601 cgagacagga gcccgcgacg ccgccgccga tcaccaaggt gtcgacggtc tcggccggca
      661 ggggcacgac gtcccgcgcg cgcgccatgt cgggcggcac gaaatcctcg tggccgctcc
      721 attcggcctg ctcgaccgac agcgcccgga tcggcaccgg cttggccggc ggccggggcg
      781 cgaacaggcc gaattcgtcg accgtatcgc tcgcgagccg cgccaccagc gcggcacagt
      841 agcggccctg gcagcggccc atgccgaccc ggcaggcgcg cttcagcgac gccggagaat
      901 tgtggccggc cgcgatcagg cggcgcaagg tgccggccgt cacctcctcg cagcggcaga
      961 cgatggcgtc gtccgcgatg gcgctgggat cgaatggcgg cgctcggaag aggcgccaca
     1021 gcgctgcctg gaagcgcgcg gcaccggcca aggcctcgcg ggcggccttc ggttcggccg
     1081 ctttcaggcc cagatcgcgg gcgatggcga cagcggcgag cgcgccttgg gcgagcgcgg
     1141 tatgggcgcc gccgaagcgg gcgccgtcgc cgatggcgaa gacctcgccc aggctggtgc
     1201 ggccgtcacc gtcggtcagg gtttccatcg agccgctgcc acgtggcacg aagcggtgcg
     1261 cgcagcccag cgaacgcgcc agttccgacg acgacgcgaa gccgtagttg agggcgacga
     1321 cgtcgacgtc gaagacaagg ttgcccgcga cgacgcggtg gacgcgatca tcgcccaaga
     1381 gttgcgtcac ctggcgaccc caatgcagac gtttcccgag ccgcgtcgcc agagagacgc
     1441 cttggagcaa caggagggga tcggccgatg ccgctgatgc gaggtcgcgc cattggacga
     1501 gatcggggcg cttggccgct tcgagcacgg ccacgacgtt ggcgccgccg tccaacagct
     1561 cggcggcagt ctgcaggcag agcgggccgt tgcccgcgat cagaatgcgc tggccaggcg
     1621 ccacccggta ggaacgc
//
LOCUS       DASWGA010000672         2731 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1603558, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000672 DASWGA010000000
VERSION     DASWGA010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2731
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1603558"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VF991_15650"
     CDS             <1..603
                     /locus_tag="VF991_15650"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9557928.1"
                     /translation="VTTVGSSVHYSLEIVARKHGVDTKGVTIVALQTIPNLVAAFKGG
                     QVDAAVFPITTFRQVESEGSGKPIAYVGDEVPWQLGAVFTSPKTIAERRPVVEKFLVG
                     YRRGAAAYHEAFGKRENGKLVPGANYDEMIGILSNALKQPPALVASGLPFIDPEGRLD
                     VGDIYKQVAFWQSTGQVSRDADPKSFIDLSFVPGHFNVPK"
     gene            complement(611..1900)
                     /locus_tag="VF991_15655"
     CDS             complement(611..1900)
                     /locus_tag="VF991_15655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557929.1"
                     /translation="MRRAIGLHMVAAMLAGASPAVAGDPLGGQALYDDVKRYDGFGPH
                     RYGSTGAAQAFDWIAGELARAGLTVSSQNFTMGRQYDFEAGSLSADGQTVAVMPHWWI
                     PEPHASFSLSAPIAAAGDASGRFVRVSLPFDRTAYLSQAHRAALDEAFARRPAAVLLT
                     VDHPSGEIYTYNVDQEGAPWPVPVILVAARDKALLDAAEQAGRPLAVDIKGRYRRDVT
                     GRNVIGRLDRGLNRSAGGRAIVVSTPVTSWFTSTCERAPGIAGFLAMARLASTRFAEA
                     DLVFVATAGHEIGHGGMAHFLRSQAPPPAATLAWAHFGASLACHEWRRDGERWLAGSA
                     VDARLRVIARSQSMDDLVRRHFGGIAGSGLVGDKAAVGELRDVHAAGYPNFFGMAGLH
                     GLFHTPADSAVGTSPDSLEPIARAFAGALGEVAAWGK"
     gene            complement(1912..2295)
                     /locus_tag="VF991_15660"
     CDS             complement(1912..2295)
                     /locus_tag="VF991_15660"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9557930.1"
                     /translation="MNTTSGHGKESASCPMDFILRMLMGPWTTYIVYNLKTHGPQRFG
                     ELKRRVAGISAKMLTERLRTLEGAGLVRRDYEATIPPKVTYSLTQRGHELDDVLGKLA
                     EIGMRWEAEDAAHRAVRATELKAAE"
     gene            2438..>2731
                     /locus_tag="VF991_15665"
     CDS             2438..>2731
                     /locus_tag="VF991_15665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003611525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX9557931.1"
                     /translation="MSTIAIVYHSGYGHTKALAEAVAKGAQAVAGAKTALVPVAEAEA
                     RQAELDGADAIIFGSPTYMGGVSAEFAKFKDWTSKRWMEGTWRNKLAAGFTASA"
BASE COUNT          433 a          927 c          931 g          440 t
ORIGIN      
        1 gtcaccacgg tgggctcgtc cgtgcactat tcgctggaga tcgtggcgcg caagcatggc
       61 gtcgacacca agggcgtcac catcgtggcg ttgcagacca ttcccaacct ggtggcggcc
      121 ttcaagggcg gccaggtcga cgccgccgtg ttccccatca cgaccttccg acaggtcgag
      181 tcggagggca gcggcaagcc gatcgcctat gtcggcgacg aggtgccatg gcaactgggc
      241 gccgtcttca cctcgcccaa gaccattgcc gagcgccggc cagtggtcga gaagttcctg
      301 gtcggctatc gccgcggcgc tgcggcctat cacgaggcgt tcggcaagcg cgagaatggc
      361 aagctggtgc ccggcgcgaa ttacgacgag atgatcggca tcctgtccaa cgcgctgaag
      421 cagccgccgg cgctggttgc ctcgggcctg cctttcatcg accccgaagg ccggctcgac
      481 gtcggcgaca tttataagca ggtcgccttc tggcaatcga ccggccaggt gtcgcgcgat
      541 gccgatccca agtcgttcat cgacttgagc ttcgtgccgg gccacttcaa cgtgccgaaa
      601 taaagggcgc tcactttccc caagccgcga cctcgcccag cgcaccggcg aacgctcgcg
      661 cgatcggctc aagactgtcc gggctggtgc ctactgcgct gtcggcgggg gtatggaaca
      721 ggccatgcag gccggccatg ccgaagaagt tcgggtatcc cgcggcgtgc acgtcgcgca
      781 gctcaccgac cgccgccttg tcgcccacca gtccgctgcc ggcgatgccg ccgaagtggc
      841 gacggaccag gtcgtccatc gattgcgagc gggcaatgac ccgcaggcgc gcgtcgacgg
      901 cgctgccggc gagccagcgt tcgccgtcgc ggcgccactc atggcaggcc agcgacgcgc
      961 cgaaatgcgc ccaggccagc gtcgctgccg gcggcggcgc ctggctgcgc aggaaatgcg
     1021 ccatgccgcc gtggccgatc tcgtggcccg ccgtggcgac gaacaccagg tcggcttcgg
     1081 cgaaccgcgt gctggcgagc cgggccatcg ccaggaagcc ggcgatgccg ggcgcgcgct
     1141 cgcaggtgct ggtgaaccag ctcgtgaccg gcgtcgacac gacgatcgcg cggccgccgg
     1201 cgctgcggtt gaggccacgg tcgaggcggc cgatgacgtt gcggcccgtc acgtcgcggc
     1261 gatagcggcc cttgatgtcc accgccagcg gccggccagc ctgctcggcg gcatcgagga
     1321 gcgccttgtc gcgggcggcg accaggatca ccggcaccgg ccacggcgcg ccttcctggt
     1381 cgacgttgta ggtgtagatc tcgccgctcg gatgatcgac cgtcagcagc acggcggcgg
     1441 gacggcgggc gaacgcttcg tccagcgcag cgcggtgcgc ctggctaagg taggcggtgc
     1501 ggtcgaacgg caggctgacg cgcacgaagc ggccgctcgc gtcgcccgcc gcggcgatcg
     1561 gcgcgctgag gctgaagctt gcgtgcggct cgggaatcca ccagtgcggc atcaccgcca
     1621 cggtctggcc gtcggcgctg agcgagccgg cctcgaaatc gtactgccgg cccatcgtga
     1681 agttctgcga ggaaaccgtg aggcctgcgc gcgcgagttc gcctgcgatc cagtcgaagg
     1741 cctgcgcggc gccagtcgag ccgtagcggt gcgggccgaa gccgtcgtag cgcttcacgt
     1801 cgtcgtacag ggcctggccg ccgagcggat cgccggcaac ggctgggctg gcacctgcga
     1861 gcatcgccgc caccatgtgc aggccgatcg cccgacgcac cgccttgtgc tctattccgc
     1921 ggccttgagc tcggtcgcgc gcacggcgcg gtgggcggca tcctcggcct cccagcgcat
     1981 gccgatctcg gcgagcttgc ccagcacgtc gtcgagctcg tggccgcgct gggtcagcga
     2041 gtaggtgacc ttgggcggga tcgtcgcctc atagtcgcgc cgcacgagtc ccgcaccttc
     2101 cagcgtgcgc agccgctccg tcagcatctt ggccgagata ccggcgacgc gacgcttgag
     2161 ctcgccgaat cgctgcgggc cgtgggtctt gaggttgtag acgatgtacg tcgtccacgg
     2221 ccccatcagc atgcgcagga tgaagtccat ggggcaggaa gcgctttcct tgccgtggcc
     2281 gctggtcgtg ttcatgtgac ccctatagtt acgaattagt acctactggc gaagatatag
     2341 tgcgcttcct aattctttcc agtcactgga tgtaacctac tgcactgcgg gaacgtaaaa
     2401 tcgtttttcc cagtcaaatc aaaagattgg agagatcatg tcgaccattg ccatcgtcta
     2461 ccactcggga tacggccaca ccaaggccct ggccgaggct gtcgccaagg gcgcccaagc
     2521 cgttgcgggc gccaagacag ccctcgtgcc ggtcgccgag gccgaagccc gccaggccga
     2581 gctggacggc gccgacgcca tcatcttcgg cagcccgacc tatatgggtg gtgtctcggc
     2641 cgagttcgcg aagttcaagg attggacgtc caagcgctgg atggaaggca cctggcgcaa
     2701 caagctcgcc gcgggcttca ccgcctcggc g
//
LOCUS       DASWGA010000673         5802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_78131, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000673 DASWGA010000000
VERSION     DASWGA010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5802
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78131"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..766)
                     /locus_tag="VF991_15670"
     CDS             complement(<1..766)
                     /locus_tag="VF991_15670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEX9557932.1"
                     /translation="MGDLFCRRGVIFLTGLVAAVLAWSSFAQAQGEPPARVGRLAFVN
                     GPVSFHDQQQSGWTPAVVNSPLTSGDALWTEPNARSEISLAGTRVRMEGATQLDMLAI
                     DDSQTRLQLDQGRIDVKSLAMDTNQPYQILTPRGTVALLQQGDYYVEAGSTQDPTRLG
                     VRAGAAQIQALNGQVLTVRPGEVGEVLGDASSPQLRTINTAPPAPPAYWAGRDRQVTY
                     DQPPQYLSAGITGYEDLNAYGSWINDGSYGEVWAPRA"
     gene            845..1426
                     /locus_tag="VF991_15675"
     CDS             845..1426
                     /locus_tag="VF991_15675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557933.1"
                     /translation="MSVADLHRLILTGENPFIRLSDKDGDPNSTDASYWRILFCPAGP
                     GHVLYLKSELTHGHWRIYSDNIAMARWLQQTVQGMLNPDLKDLTIPVVDASFAKSGDP
                     RYFWTEQVKAHDAEIVLTWYEIGEPLLIHTEPNQPPNPRPYGVCTVLVPALGARLTVN
                     GQQARGKPWKREREGRPFSTSALAFSESWTEPR"
     gene            complement(1434..2444)
                     /locus_tag="VF991_15680"
     CDS             complement(1434..2444)
                     /locus_tag="VF991_15680"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9557934.1"
                     /translation="MRLSVLDQSIAVAGRPHDQSIRNTVALAQHCEALGYQRFWVSEH
                     HNHPTIVGTAPEIVIAAIAATTHRIRIGSAGIMLPHYAPFKVAEVFRVLDALAPGRID
                     LGLGRAPGSDGRTAFALNPAANERPEHFPADVRDLIAWVHNEPLVDRHPFAAVKAFPQ
                     GATAPEVWILGSSDYGAQVAALFGLPYCYAWFFSDGAGGERAIDLYKRTYRPSARHPE
                     PHSGLCVWALAAETMEQAQYHFTSRALSRMHRDRGILAPLEAPDAAATALADYDQARV
                     ERFRKDSFVGTGPEVAARIEELRQRVGVDEMAVVTWTHDEDVRRASYTHLARAMGFAP
                     PG"
     gene            complement(2477..3346)
                     /locus_tag="VF991_15685"
     CDS             complement(2477..3346)
                     /locus_tag="VF991_15685"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9557935.1"
                     /translation="MGSISKTLGALALASGVLFASDAPAGTIDELRNTKTLRIAYDPD
                     APPFSYIAPGSPAGAQPQGYSLELCRAIADKLKEQLTIPDLKITYVPVNSQNRFEAIT
                     ANKADLLCEATTATLSRRQIVDFSIPIFIDGASFVIRPDGPRDVKLLAGKKVAVLPGT
                     TTEQELRRALTGTHINAEVVLVKTNQEGVEAVEKGDVAAYFADRATLTFLLRKEKQAA
                     GLLMAETYLSIEPIALALRRGDGEFRLAVDTALSHIYRRGEVTVIFKGAFSVLTTPSP
                     LLAALWQISGLPD"
     gene            3437..3877
                     /locus_tag="VF991_15690"
     CDS             3437..3877
                     /locus_tag="VF991_15690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9557936.1"
                     /translation="MPRATSKVVGIDHISIRVNDYAKSKAFYGRLFEFLGFEISDEYP
                     NTIGWTNGKTRYWIAPAEGRKTYRIGDVGLHHYAFELRNRRDVDALQAFLEGQGVRIV
                     DPADEYYEDYYAVFFLDPDGIKLEGMKYGELTAKRKRKSLKKKG"
     gene            3968..4507
                     /locus_tag="VF991_15695"
     CDS             3968..4507
                     /locus_tag="VF991_15695"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX9557937.1"
                     /translation="MLTIGDKFPSFDLKAVVSTDPKTAFKEISDKSDPGKWKVVFFWP
                     KDFTFVCPTEIAAFGKLNKAFNERDAVVYGVSTDSEFVHLAWRQNHPDLKALPFAMLA
                     DLKRELSQALGILDKNEGVCLRATFIVDPDGIIRFVSVNDLSVGRNPQEVLRVLDALQ
                     TDELCPCNWQKGDDVLKAA"
     gene            4518..5069
                     /locus_tag="VF991_15700"
     CDS             4518..5069
                     /locus_tag="VF991_15700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX9557938.1"
                     /translation="MSIDVLKDRLPEYARDLKLNLSSLASEQLLSPQQKAGSFVTAAL
                     AANHAPTTQAVVDAFGGELSPEALNAAKIAASLMAMNNIYYRFVHLVHAADYKTLPAK
                     LRMTAMAKPGVDKVDFELWSLVVSAINGCGMCLEAHEKVCREHGLSAEQIQAAVRIAA
                     TVHAVARTLSAEEALAVPLAQAA"
     gene            5134..>5802
                     /locus_tag="VF991_15705"
     CDS             5134..>5802
                     /locus_tag="VF991_15705"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX9557939.1"
                     /translation="MSTATQTKPPSSTLSSKGMLIGGQWVESASGARITVENPAKRSP
                     IAEVPRGNAADVERAVAAATKAYAEWRKVVPRERGTVLLKIAEAVQARAEEIARTIAL
                     ETGNALRTQARGEASITADIFRYFGGLASELKGETLPLGEHVLSYTRREPLGVVGAII
                     PWNAPVMLGALKIAPALCAGNTMVMKAAEDAPLGVLLMAEICQQFLPPGVLNVLTGYG
                     EECGG"
BASE COUNT         1022 a         1886 c         1927 g          967 t
ORIGIN      
        1 cggcccgcgg cgcccacacc tcgccgtagc tgccgtcgtt gatccagctt ccataggcgt
       61 tgagatcctc gtagcccgtg atgccggccg acagatactg cggcggctgg tcataggtca
      121 cctgacggtc acggccggcc caataagccg gtggcgccgg tggcgccgtg ttgatcgtgc
      181 gaagctgcgg ggatgaggca tcgcccagca cctcgccgac ctcgccgggc cgaaccgtca
      241 gaacctggcc gttcagcgcc tggatctgcg ctgcgccggc gcgcacgccg agccgcgtgg
      301 gatcctgtgt tgaacctgcc tcgacatagt agtcgccctg ctgcagcagg gcgaccgtgc
      361 cgcgcggcgt caggatctgg tatggctggt tggtatccat cgccaagctc ttgacgtcga
      421 tgcggccctg gtcgagttgc aggcgcgtct gcgaatcgtc gatggccagc atgtcgagct
      481 gggtggcgcc ttccatccgc acccgcgtgc cggcgagcga gatttcgctg cgggcgttgg
      541 gctcggtcca cagcgcatcg ccggaggtca gcgggctgtt gaccaccgcc ggcgtccaac
      601 cgctctgctg ctggtcatgg aaggagaccg gaccattgac gaaggcgagt cgcccgaccc
      661 gcgccggcgg ttcgccctgc gcctgggcga agctcgacca ggcgagcacg gctgcgacaa
      721 gtccggtcag aaaaatgacg ccgcgtcgac aaaaaaggtc gcccattgcc agcctcctga
      781 taggcttctt ctgcaatcga ttggaacgcc ggccgagcgc agcggttccg gcagggaggg
      841 gagaatgagc gtcgcggacc tgcaccgtct gattttgacc ggagagaacc cgttcatccg
      901 gctgagcgac aaggacggcg atcccaattc gaccgatgcg agctactggc gcatcctgtt
      961 ttgcccggcc gggccgggtc atgtgctcta tctcaagagc gagctgaccc acggccattg
     1021 gcgcatctat tccgacaaca tcgccatggc gcgctggctg cagcagacgg tgcagggcat
     1081 gctcaatccc gacctcaagg acctgacgat cccggtggtc gacgcgtcgt tcgccaagtc
     1141 gggcgacccg cgctatttct ggaccgagca ggtcaaggcg cacgacgcgg agatcgtgct
     1201 cacctggtac gagatcggcg agccattgct gatccacacc gagcccaacc agccgcccaa
     1261 tccccggccc tacggcgtct gcaccgtgct ggtccctgcg ctcggcgccc ggctgacggt
     1321 gaacggccag caggcgcgcg gcaagccgtg gaagcgcgag cgcgaaggcc ggcccttcag
     1381 cacctcggca ctggctttct ccgaaagctg gacggagccg cgctgagccc ggactagcct
     1441 ggcggcgcga agcccatggc gcgggcgagg tgggtatagc tcgcccgccg cacgtcttcg
     1501 tcatgggtcc aggtgacgac ggccatctcg tcgacgccga cgcgttgtct cagctcctcg
     1561 atgcgcgccg cgacctcggg tccggtaccg acgaaagagt ccttgcgaaa ccgttccacg
     1621 cgcgcctggt cgtaatcagc cagcgccgtc gccgccgcat cgggtgcttc cagcggcgcc
     1681 aggattcccc tgtcgcgatg catgcgcgag agcgcgcgcg aggtgaagtg gtactgcgcc
     1741 tgttccatgg tctcggcggc cagcgcccag acgcaaagtc ccgaatgcgg ctcgggatgg
     1801 cgcgcgctcg gacgataggt gcgcttgtag agatcgatcg cccgctcgcc gcccgcgccg
     1861 tcgctgaaga accaggcgta gcagtagggc aggccgaaca gggccgccac ctgggcgccg
     1921 tagtcggagc tgccgaggat ccacacttcc ggcgccgtgg cgccctgcgg gaaggctttt
     1981 accgcggcga agggatggcg atcgaccaag ggctcgttgt gcacccaggc gatcaggtcg
     2041 cgcacgtcgg cgggaaaatg ctcgggccgc tcgttggccg ccggattgag cgcgaaggcg
     2101 gtgcggccgt ccgagcccgg tgcgcggccc aatccgagat cgatgcggcc gggcgccagc
     2161 gcgtcgagca cgcggaacac ttcggccact ttgaacggcg cgtagtgcgg cagcatgatg
     2221 ccggcgctgc cgatcctgat gcggtgggtg gtggcggcga tcgcggcgat cacgatctcc
     2281 ggcgcggtgc cgacgatggt cgggtggttg tgatgctcgg agacccagaa gcgctggtaa
     2341 cccagcgcct cgcagtgctg cgccagcgcc acggtgttgc ggatcgactg atcgtgggga
     2401 cggccggcga cggcgatcga ctgatcgagg acggaaagac gcataagaac ccggacgcag
     2461 agatggcgtg cgtccgtcag tccggcaagc ccgaaatctg ccatagggcc gcgagcagcg
     2521 ggctcggcgt cgtgagcacg ctgaaagcgc ctttgaagat gaccgtgacc tcgccgcgac
     2581 ggtagatgtg gctcagcgcg gtatcgacgg cgaggcggaa ctcgccgtcg ccgcgcctga
     2641 gcgccagcgc gatcggctcg atgctgagat aggtctcggc catcaagaga ccggccgcct
     2701 gcttctcctt cctgagcagg aaggtcagcg tagcccggtc ggcgaaatag gccgcgacgt
     2761 cgcctttttc gaccgcctcg acgccctcct ggttggtctt gaccagcacg acctcggcgt
     2821 tgatgtgcgt gccggtgagc gcgcgacgca gttcctgctc ggtcgtggtg ccgggcagca
     2881 cggcgacctt cttgccggcg agaagcttca cgtcgcgcgg cccgtcgggc cggatcacga
     2941 agctcgcgcc gtcgatgaag atcgggatcg agaagtcgac gatctgtcgg cgcgacagtg
     3001 tcgccgtggt cgcttcgcag agaagatcag ccttgttcgc ggtgatcgcc tcgaagcggt
     3061 tctgcgaatt gaccggaacg taggtgattt tcaggtcggg aatcgtgagc tgttccttga
     3121 gcttgtcggc gatggcgcgg cagagctcga gcgagtagcc ctgcggctgg gcgcccgccg
     3181 gactgccggg agcgatgtag gaaaagggcg gcgcgtccgg atcgtaggcg atgcgcagcg
     3241 tcttggtgtt gcggagctcg tcgatggttc cggccggtgc gtcgcttgcg aacagcacgc
     3301 cgctcgccag cgccaatgca ccgagcgtct tcgatatcga acccatgatt tcgtcccccg
     3361 ctggcgatgg tttgaaacaa tccgatatcc ggaccgttgt gaccacagga attccaattc
     3421 cccaggagga gccgccatgc cccgcgccac atcgaaggtc gtcggcatcg accatatatc
     3481 catccgggtc aacgactacg caaagtcgaa ggccttctac ggccggctgt tcgagttcct
     3541 ggggttcgag atctcggacg aatatcccaa cacgatcggc tggaccaacg gcaaaacgcg
     3601 ctactggatc gcgccggccg agggccgcaa gacataccgc atcggcgatg tcggcttgca
     3661 ccactatgcc ttcgagctgc gcaaccgccg ggatgtcgac gccttgcagg ccttcctcga
     3721 aggccagggc gtgcgcatcg tcgatccggc cgatgaatat tacgaggact actacgccgt
     3781 cttctttttg gaccccgacg gcatcaagct cgaaggcatg aaatacggcg aactgaccgc
     3841 gaaacgcaag cgtaagtcat tgaaaaagaa aggataaggg ctttgttgaa acagtcctgc
     3901 gaatcacttg caattggagg aaggcacatc atattagaaa cgttctaatc tgttaacgga
     3961 gcgtttcatg ctgaccatcg gcgacaagtt tccttccttc gatctcaagg cggtggtgag
     4021 caccgatccc aagaccgcct tcaaggagat ttccgacaag agcgatcccg gcaaatggaa
     4081 ggtcgtgttc ttctggccga aggacttcac cttcgtctgc ccgaccgaga tcgcggcctt
     4141 cggcaagctc aacaaggcgt tcaacgagcg cgacgcggtg gtctacggcg tatcgaccga
     4201 ttcggagttc gtgcatctgg cctggcgcca gaaccaccct gacctgaagg cgctgccctt
     4261 cgccatgctg gccgacctca agcgcgagct ttcgcaggcg ctcggcatcc tcgacaagaa
     4321 cgagggcgtg tgcctgcgcg ccactttcat cgtcgatccc gacggcatca tccgcttcgt
     4381 gtcggtgaac gacctctcgg tcggccgcaa cccgcaggaa gtgctgcgcg tgctcgatgc
     4441 gctgcagacc gacgagctct gcccctgcaa ctggcagaag ggcgacgacg tcctgaaggc
     4501 cgcgtaagga ggaagccatg tccatcgatg tcctgaaaga ccggctgccg gagtatgcgc
     4561 gcgacctcaa gctcaacctg tcgagcctgg catccgagca actcctcagc ccgcagcaga
     4621 aagccggcag cttcgtcacc gccgcgctcg ccgccaacca tgcgccgacc acgcaggccg
     4681 tcgtcgacgc cttcggcggc gagctctcgc ccgaggcgct gaacgccgcc aagatcgcgg
     4741 cgtcgctgat ggcgatgaac aacatctact atcgcttcgt gcatctcgtg cacgcagccg
     4801 actacaagac cctgccggcc aagctgcgca tgaccgccat ggccaagccc ggcgtcgaca
     4861 aggtcgattt cgaactgtgg tcgctggtgg tctcggccat caacggctgc ggcatgtgcc
     4921 tggaagcgca cgagaaagtc tgccgcgagc acggcctttc cgcggagcag atccaggccg
     4981 cggtgcgcat cgccgcgacg gtccacgctg tcgcgcgcac gctcagtgca gaagaggcgt
     5041 tggcggtgcc gctggcgcaa gcggcctagc cttgtcgcgt cgcgacaggc gggtcaaact
     5101 tcggaccgat tggcaatccg aaggaggatc cgcatgtcga ccgccaccca gaccaagccg
     5161 ccctcctcca cgctgtcatc caagggcatg ttgatcggcg gccaatgggt cgagagcgca
     5221 tcgggcgcgc gcatcaccgt cgagaacccg gccaagcgca gcccgatcgc cgaggtgccg
     5281 cgcggcaatg ccgccgatgt cgagcgcgcc gtggcggccg ccaccaaagc ctatgccgag
     5341 tggcgcaagg tcgtgccgcg cgagcgcggc acggtgctgc tcaagatcgc cgaggccgtg
     5401 caggctcgcg ccgaggagat tgctcgcacc atcgcgctcg agaccggcaa cgcgttgcgc
     5461 acccaggcgc gtggcgaggc cagcatcacg gccgacatct tccgctactt cggcggcctg
     5521 gcgagcgagc tcaagggcga gaccctcccg ctcggcgagc atgtgctgtc ctacacaagg
     5581 cgcgagccgc tgggcgtggt cggcgccatc atcccgtgga atgcgccggt aatgctgggg
     5641 gcgctcaaaa tcgcgcccgc gctctgtgcc ggcaacacca tggtcatgaa ggcggccgag
     5701 gatgccccgc tgggcgtgct gctgatggcc gagatctgtc agcagttcct gccgccgggc
     5761 gtgctcaacg tgttgaccgg gtacggcgag gaatgcggcg gt
//
LOCUS       DASWGA010000674         4910 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_598250, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000674 DASWGA010000000
VERSION     DASWGA010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4910
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_598250"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..709)
                     /locus_tag="VF991_15710"
     CDS             complement(<1..709)
                     /locus_tag="VF991_15710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557940.1"
                     /translation="MTRSRHGIAATLGVLAASWAGAVAAETAYSAEGGTDSFLKLLSE
                     RLEFTVQQIPALGRHLARLPEIIDGRTALLLLGIVVASLAAEYVVRLLLSRARLKGFD
                     RLVGHSPLRAFGRALLLDLLALVALAVAGRLVLAQIGDPQSVGGRLGQDVLQAVLYWR
                     SFNLVFRAWLRPAAPEGRIAPVDDAAARGLLVALNWVIVLPLIGGHVARALETTGASR
                     EVTGAAIILYAPLISAGL"
     gene            complement(783..1217)
                     /locus_tag="VF991_15715"
     CDS             complement(783..1217)
                     /locus_tag="VF991_15715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1772 domain-containing protein"
                     /protein_id="HEX9557941.1"
                     /translation="MLGFLALVTAALFTGAAFYVNFAEQPARLALDDPAALVQWQRSY
                     ERAALMQASLAMLGFVLGLAAWLWEGRDLIWLVGAFVLLAPWPYTLLIIKPVNDRLKA
                     TGAALAGADSRALIKRWGRLHAGRTVLGVLATAIFFCAALPR"
     gene            1306..2295
                     /locus_tag="VF991_15720"
     CDS             1306..2295
                     /locus_tag="VF991_15720"
                     /inference="COORDINATES: protein motif:HMM:NF025587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HEX9557942.1"
                     /translation="MATETIPVIDLGPFLAGEAGALDRTAQELRFALTEIGFYFIVNH
                     GVPREKIRNVFDQVKRFHDQPVEKKLELKIDMNSTGYLPIRGNTLRTSTIQTGTKPNL
                     NEAFFVKRELPPGHPDLLANRRFRGPNRWPANLPGFRETIVDYCDTLERLAQKMVRLY
                     ARALDLPAEYFDGPFRDCQYSLRMTHYPHQDGPIEDEFGLAPHTDTSFLTLLAPNDIP
                     GLSIRTQSGKWIDAPAIENAYVVNGGQMLQRWTNDFFLATPHRAINRSGGERYAVPFF
                     CDSNIDWPVASVPTCVGPDKPPKYPTTWYTDYMVWYQKRNYDAVYDTSQQAAE"
     gene            2292..3287
                     /locus_tag="VF991_15725"
     CDS             2292..3287
                     /locus_tag="VF991_15725"
                     /inference="COORDINATES: protein motif:HMM:NF025587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HEX9557943.1"
                     /translation="MSGSTHTIPVIDLGPYLAGEPGAMDRTAAELRFALTQIGFYFIV
                     NHGVPDAKIREVFRQAARFHGQPIDRKMDVRIDKHNVGYLPMRGDTLRTSMVQTVTKA
                     NLNEALFVARDLPADHPDVLADRRFRSANRWPQDLPGFREAVVGYCDTLERLVQKLVR
                     LYARALGLPAAYFDDAFSEPQYKLRMTHYPNQDVPAEDEFGIAPHTDTSFLTLLAPND
                     VPGLSIRTQDGTWIDAPLVPGAFVVNGGQLLQRWTNDFFLATPHRALNRSGGERYALA
                     FFCDSNIDWPIASVPTCVGPDRPSKYPTTWYTDYMIHYQKRTYDLLNEDNQQAAE"
     gene            3339..4421
                     /locus_tag="VF991_15730"
     CDS             3339..4421
                     /locus_tag="VF991_15730"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557944.1"
                     /translation="MLWGASALAGTLALPGLTMAQQRRGLPPLAVDSAKPNGELPLID
                     FHTHLQKRAQADDLIAKMNATNVARLVLMPLYYGDGNGAISDGEGSDEQARDYARRFP
                     DRFVPFVGMQRGELNGREVMRSSTDVGLRMLRQTGQKLASGEFFGMGEFMLRFYPYTT
                     AQGIVATTDMDYPLDGWFMRQCADLSARYRAPMVFHAEAEPHVAEAARRLFEAHPQAI
                     FVWAHNCGRSGAADIAALFDRYPNLHADLGHMTYSGPGVSSYGTGWPRRTQWTYLVVD
                     DRGNLLPEMKVLFERYPDRFTIGTDTAHARVYETYLNRIPRWRYVLGQLSPAAARGFA
                     YANAERLFRMTAAGRQRFAPLSPVPV"
     gene            4454..>4910
                     /locus_tag="VF991_15735"
     CDS             4454..>4910
                     /locus_tag="VF991_15735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9557945.1"
                     /translation="MLGLMQDRPLLISQIIDFAAAYYPDVEIVSRTVEGPIHRYGYRD
                     ATKRAKQLAEALQGLGIKLGDRVGTIAWNTHRHFELYFGISGIGAVLHTLNPRLAPEH
                     VAYIANHAEDQILFVDLNLLPIVEGVWPHLKTVKHVVVMTDRAHMPASSK"
BASE COUNT          893 a         1762 c         1496 g          759 t
ORIGIN      
        1 gcaggccggc ggagatcagc ggcgcgtaga ggatgatggc cgccccggtg acctcgcggc
       61 tggcgcccgt cgtttcgagc gcgcgggcga catgaccgcc gatcagcggc aggacgatca
      121 cccagttcag cgccaccagc aggccgcgcg ccgcggcatc gtcgaccggc gcgatgcggc
      181 cctccggcgc ggcggggcga agccaggccc tgaacaccag gttgaacgac cgccaataga
      241 ggaccgcctg caggacgtcc tggccgagcc tgccgcccac gctttgcgga tcgccgatct
      301 gggccagcac gaggcggccg gcgacggcca gcgcgaccag cgccagcagg tcgagcagca
      361 gcgcccgccc gaaggcgcgc agcggcgaat ggccgaccag gcggtcgaag cctttcaggc
      421 gcgcccggct caacagcagg cggacgacgt attccgccgc cagcgacgcc accacgatgc
      481 ccagcaacag aagcgcggtg cggccgtcga tgatctcggg caggcgcgcc aggtgccggc
      541 ccagcgcggg gatctgctgc accgtgaatt ccagccgctc gctcaaaagc ttcaggaacg
      601 aatcggtgcc gccctcggcg ctataggccg tttccgccgc gaccgcgccg gcccacgacg
      661 cggcgagaac gcccagcgtc gctgcaatgc cgtgccgtga ccgtgtcatc gaattccccc
      721 ggaaagatgg cgccaaagcc taggccaatt ggtgccaagc cgccagccga cggcgggacc
      781 gtctagcgcg gcaacgccgc acaaaagaag atcgctgtcg ccagcacgcc caatacagtg
      841 cggccggcat gtagtcggcc ccagcgcttg atcagggcgc gactatcggc gccggccagc
      901 gcggcgccgg ttgctttcaa gcggtcgttg accggcttga tgatcagcaa agtgtagggc
      961 catggcgcca gcaggacgaa ggcgccgacc agccaaatca ggtcgcggcc ttcccacaac
     1021 caggcggcaa gaccgagcac gaagcccagc atggcgaggc ttgcctgcat cagagccgcg
     1081 cgttcatagg aacgctgcca ttggacgagg gcagcgggat cgtcgagcgc gagccgcgcc
     1141 ggctgttctg cgaaattcac ataaaaggcg gcaccggtga acagcgccgc cgtcaccagg
     1201 gcaagaaatc cgaggatcat atgtcctccg cgttgcacgc actggacccc catgcggcct
     1261 aggcactatc gttgcctcac agggccttgc caacaaggag cagaaatggc caccgaaacc
     1321 atccccgtca tcgacctcgg cccgttcctg gccggcgagg cgggcgcact cgaccgcacc
     1381 gcccaggagc tccgcttcgc cctgaccgag atcggcttct atttcatcgt caatcacggc
     1441 gtgccgcggg agaaaatccg caacgtcttc gaccaagtga agcgcttcca cgaccagccg
     1501 gtggaaaaga agctggaact caagatcgac atgaacagca ccggctacct gccgatccgc
     1561 ggcaatacgc tgcgcacctc aacgatccag accggcacca agcccaatct caacgaggct
     1621 tttttcgtca agcgcgagct gccgcctggg catcccgact tgctcgccaa ccgccgcttc
     1681 cgcggtccca accgctggcc ggccaacctg ccgggcttcc gcgagaccat cgtcgattat
     1741 tgcgacacgc tggaacggct ggcgcagaag atggtgcgcc tctatgcccg cgcgctcgat
     1801 ctgccggccg aatatttcga cggtccgttc agggactgcc agtactcgct gcgcatgacg
     1861 cactacccgc accaggacgg gccgatcgag gatgagtttg gtctcgcacc tcataccgac
     1921 accagctttc tcaccttgct tgcgcccaac gacatcccgg ggctgtccat ccgcacgcaa
     1981 agcggcaagt ggatcgacgc gccggccatc gagaacgcct atgtcgtcaa cggcggccag
     2041 atgctgcagc gctggaccaa cgacttcttc ctggccacgc cgcaccgcgc catcaaccgc
     2101 agcggcggcg agcgctacgc tgtgccattc ttctgcgaca gcaacatcga ctggccggtt
     2161 gcatcagtgc cgacctgcgt cggcccggac aagccgccca agtatccgac gacctggtat
     2221 accgactaca tggtctggta ccagaagcgg aactacgacg cggtctacga caccagccag
     2281 caagcggccg agtgagcggg tcaacgcaca ccattcccgt catcgacctc ggcccctatc
     2341 ttgcgggcga gccgggggcg atggaccgca cggcggccga gctgcgcttt gcgctgaccc
     2401 agatcggctt ctacttcatc gtcaatcacg gcgtgccgga cgccaagatc cgcgaggtct
     2461 tccgccaggc tgcgcgcttc catggccagc caatcgaccg gaagatggac gtccggatcg
     2521 acaagcacaa cgtcggctac ctgccgatgc gcggcgacac gctgcgcacc tcgatggtgc
     2581 agaccgtcac caaggccaat ctcaacgaag cgctgttcgt cgcccgcgac ctgccggccg
     2641 accatcccga cgtgctggcc gaccggcgct tccgcagcgc caaccgctgg ccgcaggatc
     2701 tgccgggttt ccgcgaggcc gtcgtcggct attgcgacac cctggagcgc ctggtgcaga
     2761 aactggtgcg gctctatgcc cgcgcgctcg gcctgccggc cgcctacttc gacgacgcgt
     2821 tcagcgagcc gcaatacaag ctgcgcatga cgcactatcc gaaccaggac gttcccgccg
     2881 aggacgagtt cggcatcgcc ccgcataccg acaccagctt cctgacgctg ctcgcgccca
     2941 atgacgtgcc cggcctgtcg atccgcaccc aggacggcac gtggatcgat gcgcctctcg
     3001 ttcccggcgc ctttgtcgtc aatggcgggc agttgctgca gcgctggacc aacgatttct
     3061 tcctcgccac cccgcaccgc gcgctcaacc gcagcggcgg cgagcgttac gcgctggcct
     3121 tcttctgcga cagcaatatc gattggccga tcgcgtcggt gccgacttgc gtgggcccgg
     3181 acaggccgtc caaatatccg accacctggt acacggacta tatgatccac taccagaagc
     3241 ggacctacga cctgctcaat gaggacaatc agcaggcggc cgagtaagat tgccccatgg
     3301 actgctcgtg ctgtccgcct gagccgacac ggcgcggcat gctctggggc gcctcggcgc
     3361 tcgccggcac gctcgccctg cccggcctca ccatggccca gcagcggcgc ggcctgccgc
     3421 ccctggccgt ggactccgcc aagccgaacg gcgagctgcc cctgatcgac ttccacaccc
     3481 atctccagaa gcgcgcccaa gccgatgatc tcatcgccaa gatgaatgcc acgaatgtgg
     3541 cgcggttggt gctgatgccg ctttactacg gcgacggcaa cggagcgatc agcgacggcg
     3601 agggtagtga cgagcaggcg cgagactatg cccgccgctt ccccgatcgc ttcgtgccct
     3661 tcgtcggcat gcagcgcggc gagctgaacg gccgcgaggt gatgcgcagc tcgaccgatg
     3721 tcgggctgag gatgctgcgc cagacgggcc agaagctcgc gtcgggcgag ttcttcggca
     3781 tgggcgagtt tatgctgcgc ttctatccct acacgacggc gcaaggcatc gtcgcaacga
     3841 ctgacatgga ctatccactg gacggctggt tcatgcgcca gtgcgccgac ctgtcggccc
     3901 gctaccgcgc gccgatggtg ttccatgccg aggccgagcc gcacgtcgcc gaggcggcgc
     3961 gccggctgtt cgaggctcat ccccaggcga tcttcgtgtg ggcgcacaat tgcggccgct
     4021 ccggcgccgc cgatatcgcc gccctgttcg accgctatcc caacctccat gccgacctcg
     4081 gccatatgac ctattccggc cccggagtta gttcctacgg cacgggctgg ccgcggcgca
     4141 cgcaatggac ctacctggtg gtcgacgatc gcggcaacct cctgcccgag atgaaggtgc
     4201 tgttcgagcg ttatcccgac cgcttcacca tcggcaccga caccgcccat gcccgggtct
     4261 acgagaccta cctcaaccgc atcccgcgct ggcgttacgt gctggggcag ctctcccccg
     4321 ccgccgcacg cggttttgcc tatgccaacg ccgaaagatt gttccgtatg acggcggccg
     4381 gtcgccaacg ctttgcgccc ctgtcacctg ttccggtata gaaaggggga acgccaccaa
     4441 caacggaaac gccatgctcg gcctgatgca agaccgcccg ctgctgatct cgcagatcat
     4501 cgacttcgcc gccgcctatt accccgatgt cgagatcgtc tcgcgcacgg tcgaggggcc
     4561 gatccaccgc tacggctacc gggatgccac caagcgtgcc aagcagctcg ccgaggccct
     4621 gcaggggctg ggcatcaagc tcggcgatcg ggtcggcacg atcgcctgga acacccaccg
     4681 ccatttcgag ctctatttcg gcatctccgg catcggcgcg gtgctgcaca cgctcaatcc
     4741 gcggctcgcg cccgagcatg tcgcctatat cgccaaccac gccgaggacc agatcctctt
     4801 cgtcgacctc aatctgttgc cgatcgtcga gggcgtgtgg ccccacctca agacggtgaa
     4861 gcacgtcgtg gtcatgaccg accgcgcgca catgccggcc tcctccaagg
//
LOCUS       DASWGA010000675         4222 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2355147, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000675 DASWGA010000000
VERSION     DASWGA010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4222
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2355147"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..406)
                     /locus_tag="VF991_15740"
     CDS             complement(104..406)
                     /locus_tag="VF991_15740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557946.1"
                     /translation="MPRTDTEIWLLFAPFWILGIAALIGSVWHMAHAAIVTRRAQAAG
                     HVRKASLFSKRLAWHELTDDGRHHLRRGLIAFAAFLALCLLGVGVGAAVGLVLLGR"
     gene            592..801
                     /locus_tag="VF991_15745"
     CDS             592..801
                     /locus_tag="VF991_15745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin"
                     /protein_id="HEX9557947.1"
                     /translation="MTKYLVLASMLLGTAACGDTWGQRAVTGGGIGAGSGALIGALTP
                     LGVLPGLLVGGAVGAGVGAATTPRR"
     gene            complement(861..1760)
                     /locus_tag="VF991_15750"
     CDS             complement(861..1760)
                     /locus_tag="VF991_15750"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEX9557948.1"
                     /translation="MNELASLYFVILPIVMGAAVAEGLWLSRTRAERYDWKAWGCSLA
                     DLVGRRLLAFIPYTFAAPWLGWVWEHRLATQSLDNVWSILLLFVGLEFFYYWFHRASH
                     TVRWFWASHSVHHSPNQLNLAAAYRLGWFGKFTGTSLFFTPLVLLGFTPTVVLSALFL
                     NLLYQFWLHADWIPRLGWLEYVLNTPSAHRVHHARNTEYLDANYGGVLIVFDRLFGSY
                     VAERSDVACEYGLVSHPTSSRNPFVVNVEPWIGLAKDLRSARSFGEIWMYLFGAPGWR
                     PDGQGLTTAELRNRPAPAHPVMT"
     gene            1850..2434
                     /locus_tag="VF991_15755"
     CDS             1850..2434
                     /locus_tag="VF991_15755"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9557949.1"
                     /translation="MKRRIPRQARASETVALVLEAAAQILEQGGLAAFTTNAVAERAG
                     VSIGTLYQYFADKNAVLLALAQQEMKRALGDVAQALQGGGDGTMEGRVRAMVRAMVHA
                     FRGRARARKAVMQAILAQGMGIEMMAPLASFIAQQPPALPFALTREQLFVLSRALIGT
                     IRAAVMEEQPFLRSRSFEDEVVRLVVRYVEGLPR"
     gene            complement(2431..>4222)
                     /locus_tag="VF991_15760"
     CDS             complement(2431..>4222)
                     /locus_tag="VF991_15760"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9557950.1"
                     /translation="IEEVAVDSRVGELAATEAGFATARHIVKLSTDIPRVTGVPMEPR
                     AALGHFDAASGRYTLYAGGGAIVRPKKEVAIILGIEPEQVRVVAREVGGNFGTRNFFY
                     PEFALVCWASRRTGRPVKWTCERQEAFLSDYAGRDFRIESELALDADGTFLGLSATRT
                     SNLGAYTASFVPLTKGTQIMTSLYRLPAVARARGLLSNTACTAPYRSAGRPESMFVIE
                     RLIDLAARAHGFDRIELRRRNLIATTPHTNAFGVTYDSGDYLGSLDDVLKLADWSGFA
                     TRRAETQARGLRRGIGLGGYIEAQSGAPAERAEVTVLPEGAVEIVIGTLSSGQGHDTS
                     FAQLASEWLGVPADKVRLVTDDSDRMSVGGGSHSGRSLRLAATTIRQASLGIVAKGKK
                     LAALQLEAAEADIAFADGRFTIAGTDRGIGLLALAAERGPIADQADVDSRVGSYPYGW
                     HVCEVEVDAETGVVRIDRYTTIDDVGRAVNPLILHGQTHGGIAQGAGQALMERCFYAP
                     DGQLLSGSFMDYAMPRADDFPAFATALSEVPSTNHPLGFRGGGEGGITPALGVIVNAV
                     VDALADLGVSHVDMPASPERVWQAIGAARG"
BASE COUNT          734 a         1373 c         1489 g          626 t
ORIGIN      
        1 tgtcattggc agttctggcc gtagcgctgg tcgcctgcga gcaggaggtg caaatcgcca
       61 agcagtcggc cggcgactac gaggtcgtgg ccctaatggc cgattaacga ccgagcagca
      121 ccagcccgac ggccgcaccc accccgacgc ccaaaaggca gagcgccagg aaggccgcga
      181 aagcgatcag cccgcgcctg agatgatggc ggccatcgtc cgtcagttcg tgccacgcca
      241 ggcgcttgga gaaaagcgat gccttgcgca catggccggc cgcctgggcg cggcgggtga
      301 cgatcgcggc atgagccata tgccagacgc tgccgatcag ggcggcgatg cccagaatcc
      361 agaacggcgc aaacagcagc catatctcgg tgtcggtccg gggcacccgg atctcccttc
      421 gctgattcgt tgtgtgcggg agtgtctcgc gcgaggcgga cagtgacaat cctgtggccg
      481 gcccgaaatc acggcgggga acccggggag aggcgagtac gttggtacgt acggtgtgtg
      541 agggacacca gtgtgggtac ctcatcgctc cgcaacgggg agtcttctgc aatgaccaag
      601 tatctcgtgc tcgcctccat gctcctgggc accgccgcct gcggcgatac gtggggccag
      661 cgcgccgtca ccggcggtgg catcggcgca ggctcgggcg ccctgatcgg cgccctgacg
      721 ccgctcggcg tcctgccggg cctcctggtg ggcggcgcgg tcggcgccgg cgtgggtgcg
      781 gccacgactc cccggaggta gccacacgct cggtgtcatc ccgagcggct gtcggcggaa
      841 aggcaagcgg tcagcgaaga tcaagtcatg acgggatggg ccggggccgg gcggttcctg
      901 agctcggcgg tggtgaggcc ctggccgtcg gggcgccagc ccggcgcgcc gaacaggtac
      961 atccagatct cgccgaacga ccgcgccgaa cgcaggtcct tcgccagacc gatccacggc
     1021 tcgacgttga cgacgaaggg attgcgggag gacgtgggat gggagaccag cccgtactcg
     1081 caggccacgt cgctgcgctc ggcgacatag ctgccgaaca agcggtcgaa cacgatcagc
     1141 acgccaccat agttggcgtc gagatactcg gtgttgcgcg cgtgatggac gcgatgggct
     1201 gacggcgtgt tgagcacgta ttcgagccag cccagtctcg gaatccagtc ggcgtgcagc
     1261 cagaactgat agagcaggtt caagaacagc gccgacagca cgaccgtggg cgtgaagccc
     1321 aacagcacaa gcggcgtgaa gaagagcgac gtccccgtga acttgccgaa ccagcccagc
     1381 cgataggccg cggcgaggtt gagctggttg ggcgaatgat gcaccgaatg cgaagcccag
     1441 aaccagcgca cggtgtgact cgcgcgatgg aaccagtagt agaagaattc caggccgacg
     1501 aagagcagca gtatcgacca gacattgtcg agcgactgcg tcgccagccg gtgctcccac
     1561 acccagccga gccagggcgc ggcaaatgta taaggaatga acgcgagcaa gcgacggccg
     1621 acgagatcgg ccaacgaaca gccccacgcc ttccagtcgt agcgttcggc gcgggtgcgc
     1681 gacagccaca ggccttcggc cacggcggcg cccatgacga tcggcaggat gacgaaatag
     1741 aggctggcga gttcgttcat gaatggaata ttatgagcat cgctcagatt taatactcgc
     1801 tttccgccgt cgccgggcag ccatgaccag cccccgccaa gccgctgatg tgaaacggag
     1861 aatcccgcgc caggcacgcg ccagcgagac cgtggcgctg gtcctcgagg cggcggctca
     1921 gattctcgag cagggcggcc tcgcggcatt cacgacgaat gccgtggccg agcgggcggg
     1981 cgtcagcatc ggcacgctct atcaatactt tgccgacaag aacgccgtgc tgctggcgct
     2041 ggcgcagcag gagatgaagc gcgcgctggg cgacgtggcg caggcgctgc aaggtggggg
     2101 cgacggcacc atggagggcc gcgtgcgcgc catggtgcgg gcgatggtcc atgccttccg
     2161 cggtcgggca agggcgcgca aggcggtgat gcaggcgatc ctggcacagg gcatgggtat
     2221 cgagatgatg gcgccgctcg cctccttcat tgcccagcaa ccgccggcat tgccgttcgc
     2281 gctgacgcgc gagcaactct tcgtgctgtc gcgcgcactc ataggcacga tccgcgcggc
     2341 ggtgatggag gaacagccct tcctcagaag ccgcagcttc gaggacgaag tcgtgcggct
     2401 ggtcgtgagg tatgtcgagg ggttgccgcg ctagccgcgc gccgcgccga tggcctgcca
     2461 cacgcgctcc gggctggccg gcatgtcgac atggctgacg ccgaggtcgg ccagcgcatc
     2521 gaccacggca ttgacgatca cgcccagcgc cggcgtgatg ccgccctcgc cgccgccgcg
     2581 gaagcccagc ggatggttgg tcgacggcac ctcgctcaac gccgtcgcga aggcgggaaa
     2641 gtcgtcggcg cgcggcatgg cgtagtccat gaacgagccc gacaggagct ggccgtcggg
     2701 cgcatagaag cagcgctcca tcagcgcctg gccggcgccc tgggcgatgc cgccatgggt
     2761 ctggccgtgc aggatcagcg ggttcacggc gcggccgaca tcgtcgatcg tggtgtagcg
     2821 gtcgatgcgc acgacgccgg tctcggcatc gacctcgacc tcgcagacat gccagccgta
     2881 gggataggag ccgacccggc tgtcgacatc ggcctggtcg gcgatcggcc cgcgctcggc
     2941 cgccagcgcc agaaggccga tgccgcggtc ggtgccggcg atggtgaaac ggccgtcggc
     3001 gaaggcgatg tcggcttcgg ccgcttcgag ttgcagggcg gcgagcttct tgcccttggc
     3061 gacgatgccc aacgacgcct gccggatcgt cgtcgccgcc agccgaagcg agcggccgga
     3121 atgcgagccg ccgcccaccg acatgcgatc gctgtcgtcg gtgaccagac gcaccttgtc
     3181 tgccggcacg cccagccatt cgctggcgag ttgggcgaag ctggtgtcat gcccttgccc
     3241 cgacgacagc gtgccgatca cgatctcgac tgcgccttcc ggcagcaccg tgacttccgc
     3301 gcgctcggcc ggcgcgccgc tttgcgcctc gatatagccg ccgagcccaa tgccacgccg
     3361 cagcccacgc gcttgcgtct cggctcggcg cgtcgcgaag ccgctccaat cggcgagctt
     3421 cagcacgtca tccaggctgc cgagatagtc gccgctgtcg taggtgacgc cgaaggcgtt
     3481 ggtgtggggc gtcgtcgcaa tcaggttgcg ccggcgcagt tcgatgcggt cgaagccatg
     3541 ggcacgggcg gcgagatcga tcaggcgctc gatcacgaac attgattcgg gccggccggc
     3601 gctgcgatag ggcgcggtgc aggccgtgtt gctcaagagg ccgcgcgccc gcgccaccgc
     3661 cggcagacgg tagaggctgg tcatgatctg cgtgcccttg gtcagcggca cgaaggaggc
     3721 ggtgtaggcg ccgagattgc tggtcctggt ggcgctgagc ccgaggaagg tgccgtcggc
     3781 atcgagcgcc agctccgatt cgatgcggaa gtcgcggccg gcatagtcgc tcaagaacgc
     3841 ctcctgccgt tcgcaggtcc acttgaccgg ccggccggtc cggcgcgacg cccagcacac
     3901 cagggcgaat tcgggataga agaagttgcg ggtgccgaaa ttgccgccga cctcgcgggc
     3961 gacgacgcgc acctgctcgg gctcgatgcc taaaatgatc gcgacctctt tcttgggccg
     4021 cacgatggcg ccgcctccgg catacaaagt gtagcggccc gaggcggcat cgaaatggcc
     4081 gagcgcggcg cgcggctcca tcggcacgcc ggtgacgcgc gggatgtcgg tggagagttt
     4141 cacgatgtgg cgcgccgtgg cgaaacctgc ctcggtcgcc gccagctcgc cgacccgcga
     4201 atccacggcc acctcctcga tt
//
LOCUS       DASWGA010000676         2018 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1219422, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000676 DASWGA010000000
VERSION     DASWGA010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1219422"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..695
                     /locus_tag="VF991_15765"
     CDS             <1..695
                     /locus_tag="VF991_15765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007878545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9557951.1"
                     /translation="IFQEPMTSLNPVMRIGDQITEAVRLHRDMTRREAWARAVEMLRL
                     VRIHEPARRALEYPHQLSGGMRQRAMIAMALACRPALLIADEPTTALDVTVQAEIIDL
                     MAELCAAKGTAILMISHDLGLVANMCRRVAVMYAGRIVEAQVAEAIFATPRHPYTKGL
                     VDSLPLLGERSRRGRQRLREISGVVPSIAAYPSGCRFNPRCPAVTDICRSVAPDITPL
                     PADGLVRCYHHG"
     gene            688..1656
                     /locus_tag="VF991_15770"
     CDS             688..1656
                     /locus_tag="VF991_15770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014531912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9557952.1"
                     /translation="MAEPLLKLDELAVHFTVGGALRGGVKRLKAVDGVSLDVKPGECL
                     GLVGESGCGKSTLALAIMGLIPPTRGHISLNGHEISSRERMETARTVQMVFQDPYASL
                     NPRQTVRRTLADPLRLHGVTNRTEVDQRVMDMMAKVGLRPDHADRYPHEFSGGQRQRI
                     GIARALILQPKLVICDEPVSALDVSIRAQIINLLLDLKDEMGLAYIMISHDLGVVEHV
                     SDRVAVMYLGRIVEQGGWREIFEDPRHPYTRALIAAIPDPFHLVAATAKAKAKGEIAS
                     ALDPPPGCHFNPRCPLKADRCVSEVPLLEAVAPGHRAACHFRDRVN"
     gene            1674..>2018
                     /locus_tag="VF991_15775"
     CDS             1674..>2018
                     /locus_tag="VF991_15775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9557953.1"
                     /translation="MKTTDVDRITDWIVRRGLEGAEEADLLREFCDRCNAVRLPIARA
                     LVVIDTLHPVHEGTVFRWRNDDVEENAATQYGRTTEGAAAEAWQRSPFYQLLQTGGEE
                     LRRRIGFGEPADF"
BASE COUNT          335 a          701 c          653 g          329 t
ORIGIN      
        1 tgatcttcca ggagccgatg acctcgctca acccggtgat gcggatcggc gaccagatca
       61 ccgaggcagt acggctgcat cgcgacatga caaggcgaga ggcgtgggcg cgggcggtcg
      121 agatgctgcg cctggtgcgc atccacgaac cggcgcggcg cgcactggaa tatccgcacc
      181 agctctccgg cggcatgcgc cagcgcgcga tgatcgcgat ggcgctcgcc tgccggccgg
      241 cgctgttgat cgccgacgag ccgaccacgg cgctcgacgt cacggtgcag gccgagatca
      301 tcgacctgat ggccgagctc tgcgccgcca agggcaccgc catcctgatg atcagccatg
      361 atctcggcct ggtcgccaat atgtgccggc gggtagcggt gatgtatgcc ggccgcatcg
      421 tcgaagccca ggtcgccgag gcgatttttg ccacgccgcg ccatccctac acaaaagggc
      481 tggtcgattc cctgccgcta ctgggcgagc gttcgcggcg cggccgccag cgtctgcgcg
      541 agatctcggg cgtggtgccc tcgatcgcgg cctatccgtc gggctgccgc ttcaatccgc
      601 gttgcccggc cgtgacggac atctgccggt ctgtcgcgcc cgacatcacg cccttgccgg
      661 ccgacggcct cgtgcggtgc taccaccatg gctgagccgc tgctgaagct cgacgaactt
      721 gcggtccatt tcaccgtcgg cggcgcgctg cgtggcggcg tcaaaaggtt gaaggcggtc
      781 gatggcgtca gcctcgacgt gaagcccggc gaatgcctgg gcctagtggg cgaatcgggt
      841 tgcggcaagt cgaccctggc gctggccatc atgggcctga tcccgccgac tcgcggccat
      901 atcagcctga acggtcacga gatatcgagc cgcgaacgca tggagacggc gcgcacggtg
      961 cagatggtct tccaggaccc ctacgcctcg ctcaatccgc gccagacggt gcgccgcacg
     1021 ctcgccgatc cgctgcgcct gcacggcgtc accaaccgga ccgaagtcga ccagcgcgtc
     1081 atggacatga tggccaaggt cggattgcgt cccgaccatg ccgaccgcta tccgcacgaa
     1141 ttctccggcg gccagcgcca gcgcatcggc atcgcccgcg ccctgatctt gcagcccaaa
     1201 ctggtgatct gcgacgagcc ggtgtcggcg ctcgacgtct cgatccgcgc ccagatcatc
     1261 aacctgctgc tcgatctcaa ggacgagatg gggctcgcct acatcatgat cagccacgat
     1321 ctcggcgtgg tcgagcatgt gagcgatcgg gtggcggtga tgtatctcgg ccgcatcgtc
     1381 gagcagggcg gctggcgcga gatcttcgag gacccgcgcc atccctatac gcgcgccctg
     1441 atcgccgcca tccccgatcc cttccatctc gtcgccgcga cagccaaggc caaggcgaag
     1501 ggcgagatcg cgagcgccct cgacccgccg ccgggctgcc atttcaaccc acgctgcccg
     1561 ctgaaggccg accgctgcgt gagcgaggtg ccgctgctcg aagcggtcgc ccctggtcat
     1621 cgcgcggctt gtcatttccg ggatcgcgtg aattgatggg gctgtaaggt cccatgaaaa
     1681 caaccgacgt cgatcgcatc accgattgga tcgtccgccg cggcctggaa ggtgcggagg
     1741 aagccgacct gctgcgtgaa ttctgcgaca gatgcaacgc tgtgcgcctg ccgatcgcgc
     1801 gcgcgctcgt cgtcatcgat accctgcatc ccgtgcacga aggcaccgtc ttccgctggc
     1861 gcaacgacga tgtcgaggag aacgcggcca cccaatacgg ccgcaccacc gaaggcgccg
     1921 ccgccgaagc ctggcagcgc agtccgttct atcaactgct gcagaccggc ggcgaggaac
     1981 tccgccggcg catcggattt ggcgagccgg ctgacttc
//
LOCUS       DASWGA010000677         2036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1088985, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000677 DASWGA010000000
VERSION     DASWGA010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088985"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..932)
                     /locus_tag="VF991_15780"
     CDS             complement(<1..932)
                     /locus_tag="VF991_15780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX9557954.1"
                     /translation="MVANIGHYIGNKPVAGKSGRAGDVTNPATGEVTGKVAFASEAEI
                     DQAVQIAKKAQATWAATPPLRRQRVMFNLKGLIEKRTDDIARLMSLEHGKTFDDAKGE
                     VGRGLEVVEFSCAIAHHMRGDFTEQVASDMDTWSIRQPVGVVAGITPFNFPIMIPCWM
                     GAMAVACGNAFILKPSEKDPSAPMLLAELFAEAGLPAGIFQVLNGDKVAVDALLKHPD
                     VPAISFVGSTAIGEYVYHQGTQRNKRVQALCGAKNHMVIMPDADLDQATDALIGAGYG
                     AAGERCMAISVAVAVGDVGDRLLAKLAPRVQALKV"
     gene            complement(1094..>2036)
                     /locus_tag="VF991_15785"
     CDS             complement(1094..>2036)
                     /locus_tag="VF991_15785"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557955.1"
                     /translation="RIVAAADSARIGLTLLPVLYRQGGFLGKPATPAQRRFLNDRESY
                     ARLMETRVPGGNIGIAPHSLRAVTLDDLQWAARTWPGLPAHIHVAEQTREVEDCLAAH
                     GKRPIDLLLDTIEIEIGEADARRWCLVHATHATAGELARIAKANATVGLCPITEANLG
                     DGLFDASGFLAEGGQFGIGSDSLIRISAADELRTLEYGQRLKHRQRNVLGEATRSTGR
                     RLFEAALAGGARATDEMTVGGISAGKRADFVVLDHHHPALAAAQGDSLIDAWLFAADN
                     TAIKSVYCRGVPVVQNGRHVARDELSRRYAKALHGLS"
BASE COUNT          308 a          687 c          689 g          352 t
ORIGIN      
        1 accttgagcg cctgcacccg tggtgccagc ttggccaaaa gcctgtcgcc gacatcgccc
       61 accgcgacgg cgaccgagat cgccatgcag cgctcgcctg ccgcgccata gcccgcgccg
      121 atcagcgcgt cggtcgcctg gtcgaggtcg gcgtcgggca tgatcaccat gtggttcttg
      181 gcgccgcata gcgcctggac gcgtttgttg cgctgcgtgc cctggtgata gacgtactcg
      241 ccgatcgccg tcgagccgac gaaggagatc gccggcacgt cggggtgctt caagagcgca
      301 tcgacggcga ccttgtcgcc gttcagcacc tggaagatgc cggccggcag gcccgcctcg
      361 gcgaacaact cggccagcag catgggcgcg ctggggtcct tctccgacgg cttcaggata
      421 aaggcgttgc cgcaggccac cgccatggcg cccatccagc acgggatcat gatcggaaag
      481 ttgaagggcg tgatgccggc caccacgccg accggctggc ggatcgacca cgtatccatg
      541 tccgacgcga cctgctcggt gaagtcgccg cgcatgtggt gggcgatagc gcaggagaat
      601 tccacgacct ccagcccgcg gccgacctcg cccttggcgt cgtcgaaggt cttgccgtgc
      661 tcgagcgaca tcagtcgggc gatatcgtcg gtgcgcttct cgatcaggcc tttgaggttg
      721 aacatcacgc gctggcggcg cagcggcggc gtcgcggccc aggtcgcttg cgccttcttg
      781 gcgatctgca cggcttggtc gatctcggct tccgaggcga aggccacctt gcccgtcacc
      841 tcgccggtcg ccgggttggt gacgtcgccc gcgcgcccgc tcttgcccgc aaccggcttg
      901 ttgccgatgt aatgcccgat attggcgacc atgttccgct cctccgaagt ccacgttttt
      961 ggattgccgc ggttttaaca ttcatcgctg ggggcgcgcc actggagtgg cgcgtcttct
     1021 caggctcttt tggaccgcgc gcatcttgcg cgctcagaat catgagcgcg caagatgcgc
     1081 gcggtccgca agatcatgac aggccgtgca aagccttggc gtaccgccgg ctgagttcgt
     1141 cgcgggcgac atggcggccg ttctgcacca ccggcacgcc acggcaatag actgatttga
     1201 tcgccgtgtt gtcggccgcg aacagccagg catcgatcag gctgtctcct tgcgcggcag
     1261 cgagcgcggg gtggtggtgg tccagcacca cgaaatccgc acgcttgccg gcactgatgc
     1321 cgccgaccgt catctcgtcg gtcgcccggg cgccgccggc caacgccgct tcgaacaatc
     1381 gccggccggt cgagcgcgtc gcctcgccca gcacattgcg ctgccggtgc ttcagccgct
     1441 ggccgtattc cagggtgcgc agctcgtcgg cggcggaaat gcggatcagt gaatccgagc
     1501 cgatgccgaa ctggccgccc tcggccagga acccggacgc atcgaacaag ccgtcgccga
     1561 gattggcttc ggtgatcgga caaagcccga ccgtggcatt ggctttggcg atgcgcgcca
     1621 gttcgccggc ggtggcgtgg gtggcgtgga cgaggcacca gcgacgggcg tcggcctcgc
     1681 cgatctcgat ctcaatcgtg tcgagcagca ggtcgatcgg ccgcttgcca tgcgcggcca
     1741 ggcaatcctc gacctcgcgc gtctgttcgg cgacatggat atgcgccggc aggccgggcc
     1801 aggtccgagc cgcccattgc aggtcgtcca gcgtgacggc gcgcagcgag tggggcgcga
     1861 tgccgatatt gccgccgggc acccgggttt ccatcagccg cgcataggac tcgcggtcgt
     1921 tgaggaagcg ccgctgagca ggcgttgccg gcttgcctaa gaagccgccc tggcgataga
     1981 gcacgggcag cagcgtgagg ccgatgcgcg ccgagtcggc cgccgccacg atgcgc
//
LOCUS       DASWGA010000678         1713 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_598787, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000678 DASWGA010000000
VERSION     DASWGA010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_598787"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VF991_15790"
     CDS             complement(<1..570)
                     /locus_tag="VF991_15790"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0055129 - L-proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEX9557956.1"
                     /translation="MGKLLLVGCGKMGGALLEGWLARGLSVADAIVAEPVDALRPNKP
                     GLRAVASTSEVSETPEIVVLAVKPQSMDGVLADLRRFADEGSVFLSIAAGKTLKYFAA
                     HLGTTAKVVRSMPNTPAAVRQGISVATAAKNVSAAEKKRCHELLEAVGQVLWVDDEAL
                     MDPVTALSGSGPAYVFLLVEAMAAAGAKLG"
     gene            complement(581..1315)
                     /locus_tag="VF991_15795"
     CDS             complement(581..1315)
                     /locus_tag="VF991_15795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX9557957.1"
                     /translation="MGLVKVESSEGIATITMTRADKRNALTQALCDELYEAYRGFEEG
                     GDQVAILQADGPAFCVGADLKEPPAAMWKAVPHVSHKLTKPVIAATQGWVIGGAICMV
                     MTCDLMVSADTTRFMYPEAKVGVFGGLMPGIVSRMPHKVAMELLLLGEEISVERAYDV
                     GFVNKVVPLGEERAEARRMARIIAESAPLVIRTLRDFANQTLPRGPAEIFVPERYKLE
                     RIAGSEDRKEGAAAFREKRPAKFRGR"
     gene            1403..1660
                     /locus_tag="VF991_15800"
     CDS             1403..1660
                     /locus_tag="VF991_15800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEX9557958.1"
                     /translation="MQTRNPFIDDLAKVANGAMGALSGVKDEVEARVRDQIAKILDGM
                     DIPRRDEFDAVKAMAAKAREENEELKKQIAELQARLLNTGP"
BASE COUNT          291 a          598 c          552 g          272 t
ORIGIN      
        1 cccgagcttg gcgccggccg ccgccatcgc ctcgaccagc aggaagacat aggccgggcc
       61 gctgcccgac agggccgtca ccggatccat caacgcctcg tcgtcgaccc acagcacctg
      121 gccgacggct tcaagaagct cgtggcagcg cttcttctcc gccgccgaca cattttttgc
      181 cgccgtggcc acgctgatgc cctgccgcac cgccgccggc gtattgggca tcgaccgcac
      241 gaccttggcc gtcgtgccga gatgggcggc aaaatatttg agggtcttgc cggcggcgat
      301 cgacaggaac accgagcctt cgtcggcaaa gcgtctgagg tcggccagca cgccatccat
      361 cgattgcggc ttgaccgcga gcacgacgat ctcgggcgtt tcgctgacct ctgacgtcga
      421 ggcgacggcg cgcagccccg gcttgttcgg cctcagcgca tcgaccggct cggcgacgat
      481 tgcatcggct acgctgaggc cgcgcgccag ccagccctcc agcagggcgc cgcccatctt
      541 gccgcaaccg accagcagca gcttgcccat ggtgctgtcc tcacctgccc ctgaatttcg
      601 ccggccgctt ctcgcggaag gcggcggcgc cttccttgcg atcctcgctg ccggcgatgc
      661 gctcgagctt gtagcgctcg ggcacgaaga tctcggccgg gccgcgcggc aaggtctggt
      721 tggcgaagtc gcgcagggtg cggatcacca acggggccga ctcggcgata atcctggcca
      781 tgcgccgcgc ttcggcgcgt tcctcgccca atggcacgac cttgttgacg aagcccacat
      841 cgtaggcgcg ctcgaccgag atctcttccc ccaggagcag gagctccatg gcaaccttgt
      901 gcggcatgcg cgagacgatg cccggcatca ggccgccgaa caccccgacc ttggcctcgg
      961 gatacatgaa cctggtggtg tcggccgata ccatcaggtc gcaggtcatg accatacaga
     1021 tggcgccgcc gatcacccag ccttgagtgg cggcgatcac cggcttggtg agcttgtggc
     1081 tgacatgcgg taccgccttc cacatcgcgg ccggcggctc tttgagatcg gcgccgacgc
     1141 agaaggccgg cccgtcggcc tgcaggatgg cgacctggtc gccgccctcc tcgaagccgc
     1201 gataggcctc gtagagctcg tcgcacagcg cctgggtcaa ggcattgcgc ttgtcggcgc
     1261 gcgtcatggt gatggtggcg atgccctcgc tcgactcgac tttgaccaaa cccacggctt
     1321 cctccggtcc tgcttgcgcg taatgctagc agccgcccat acttgacgca tcccaagaga
     1381 gggccgcagc aggaggcacg tcatgcaaac ccgcaatccg ttcatcgacg acctcgccaa
     1441 ggtggccaac ggcgccatgg gcgcgctgag cggcgtgaag gacgaggtcg aggcccgcgt
     1501 ccgcgaccag atcgccaaga tcctggacgg catggacatc ccgcgccgcg acgagttcga
     1561 cgccgtgaag gccatggccg ccaaggcgcg cgaggagaac gaggagctga agaagcagat
     1621 cgccgagctg caggcccgcc tgctgaacac gggaccgtag ggcatgtcgg ccggcatcga
     1681 gatagctgtc atcccgagcg aagcgaggga tcc
//
LOCUS       DASWGA010000679         4306 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_598889, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000679 DASWGA010000000
VERSION     DASWGA010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4306
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_598889"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..134
                     /locus_tag="VF991_15805"
     CDS             <1..134
                     /locus_tag="VF991_15805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEX9557959.1"
                     /translation="VMGCAGMARYRDRLQRHVGLPVVEPSQAAVSMAIGRSRLGWSV"
     gene            144..1589
                     /locus_tag="VF991_15810"
     CDS             144..1589
                     /locus_tag="VF991_15810"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX9557960.1"
                     /translation="MATDVSFKGAAQAPTDPKGPTGELANWLYGLRLEAVPEVTRERA
                     KHLILDGIACALVGARLPWSDTAVETITRFEGTGDRTIIGWGRTASAPVACLLNGTFI
                     QGFELDDFHPLGPLHSAAVVVPSLLACSEELGHVSGEKFLLGAIAGFEVGPRVGMALH
                     GAEMLSRGWHSGSVFGTHASAAAAGVLLDLDAARFEDALGLAGTQSGGLMAAQFEAMC
                     KRMHHGFAARNGLYSALLAARGYTGIKRVFEREYGGFLSVFGEGHSPDAGKIVAGLGE
                     QWETRRIAVKPYAAMGALHAPLDAIFDIMAERPLKSGDIDRINIDMSHAAYHHGWWPL
                     QKPLTPIAAQMNVGYAVAVAILDGAAMVQQFAPQRINRDDVWALIPKITAHHDPAFDK
                     AGSSARNTRVTVRLTDGTTLQHAVQIARTISAPLSNEKIVAKYRTLTDGIVDPRRQAD
                     IVDAVLNLDAFTDTSRLTRLLAPPVGAAFSE"
     gene            complement(1690..3102)
                     /locus_tag="VF991_15815"
     CDS             complement(1690..3102)
                     /locus_tag="VF991_15815"
                     /inference="COORDINATES: protein motif:HMM:NF024547.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3987 domain-containing protein"
                     /protein_id="HEX9557961.1"
                     /translation="MSVFALDPDLASPTAGWPEIDLSVLEEKRGAVPPFPLDLVPQPW
                     RDWVNDTASSAGAPADYVVQAVLAGLAGLCGAGVAVRITPVWSEPLVLWQMAVGGPSS
                     GKSRALASMQRLLGSIEEERRAHDDGRREHHAEGAKRAGIAEAFVPSQVVTTEITLEA
                     IGDIVRANPRGVIVWRDEASAWLGELGACPERSRRDDCVHWRQAWAAGAVTIDRQRAQ
                     APLQLGNFPVSILGTIQPDRLQETLHESDDGLAACFLHAWPGAQPYRSLADRKIARDD
                     EALKMLRRVSRLARTPDDPLVLSFDARGVKAFDGFLSRLHAELRNTEGLDAAWLGKGP
                     ATVTRLAVALELLAWSGGGGPGLPGPIGRDQVEAAASLWASYFRPHARAVFDRAMPSD
                     FERRVRRVARWLKEEGTAVVSREDIRRRALGQTVNANDTDQVLYRLHFLGFVRPDRCE
                     DRGPGRPARRWQVNPALEAA"
     gene            3578..>4306
                     /locus_tag="VF991_15820"
     CDS             3578..>4306
                     /locus_tag="VF991_15820"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9557962.1"
                     /translation="MIRTSSIENSGGPLTREHRRLAAVVAADVVGYSRLMSRDEAGTL
                     ARLKANRQERLEPALARNGGRLVKLTGDGALVEFSSAVDALRAAIEVQQAISDANSDQ
                     PEDERIVFRIGIHLGDLIVDDDDLYGDGVNVAARLEAEAPAGGILVSRAIREAVDGRL
                     KAKLHALGDLALKNIERPVRAFRVEWEAADWRSVSTVPINSTKTVPAAASPRAALDKP
                     SIAVLPFQNMSGDPEQEYFADGMVE"
BASE COUNT          716 a         1461 c         1430 g          699 t
ORIGIN      
        1 tggtcatggg ctgcgccggc atggcccgct accgcgaccg cctgcagcgt catgtcggcc
       61 tgccggtggt cgagccgagc caggcggcgg tgtcgatggc gatcggccgg tcgaggctgg
      121 gctggtcggt ctgaaccgag agcatggcaa cggacgtaag cttcaaaggc gccgcgcaag
      181 cgccgacgga ccccaagggg ccgaccggag agctggcgaa ctggctgtac gggttgcgtc
      241 tggaggcggt tcccgaggtg acccgggagc gcgccaagca tctgatcctg gacggcattg
      301 cctgcgccct cgtcggcgcg cgactgccat ggtccgatac ggcggttgaa acgatcacgc
      361 gctttgaagg gaccggcgac cggacgatca tcggctgggg acgcaccgcc agcgcaccgg
      421 tcgcctgcct gctcaacggc accttcatcc agggcttcga gctcgacgac ttccatccgc
      481 tgggaccgct gcacagcgcg gcggtggtcg ttccctccct cctcgcctgc tccgaagaat
      541 tggggcacgt gagcggcgaa aagttcctgc tgggcgccat cgccggcttc gaggtcggcc
      601 cgcgcgtcgg catggcgctg cacggcgctg agatgctgtc gcgcggttgg cattccggct
      661 cggtgttcgg cacccacgcc agcgcggccg ccgccggcgt cctgctcgat ctcgacgccg
      721 cccgcttcga ggacgccctg ggattggccg gcacccagtc cggcggattg atggcggcgc
      781 agttcgaggc gatgtgcaag cgcatgcatc acggcttcgc cgcccgcaac ggcctctact
      841 cggcgcttct ggcggcgcgc ggctataccg ggatcaagcg ggtgttcgaa cgcgagtatg
      901 gcggcttcct gtcggtgttc ggcgaaggcc attcgcccga cgccggcaag atcgtggccg
      961 gtctgggcga gcaatgggag acaaggcgaa tcgccgtaaa gccctatgcc gcgatgggcg
     1021 ccctgcacgc gccgctcgat gcgatcttcg acatcatggc tgaacggccg ctgaagagcg
     1081 gcgacatcga tcgcatcaac atcgacatgt cgcacgccgc ctatcaccac ggctggtggc
     1141 cgctgcaaaa gccgctgacg ccgatcgcgg cgcagatgaa cgtgggctac gccgtcgccg
     1201 tcgcgatcct cgacggcgcg gcgatggtcc agcagttcgc cccgcagcgc atcaatcgcg
     1261 acgacgtgtg ggcgttgatc ccgaagatca ccgcccacca cgatcccgcg ttcgacaagg
     1321 ccggcagctc ggcccgcaac acgcgcgtga ccgtccgcct cacggacggc acgacgcttc
     1381 aacacgccgt ccagatcgcg cgaacgatct cggctccgct cagcaacgag aagatcgtcg
     1441 cgaaataccg caccctgacg gacggcatcg tcgacccccg acggcaggcc gatatcgtgg
     1501 acgctgtgct caacctcgac gcgttcaccg acacatcccg gctgacgcgc ctgctggcac
     1561 cgccggttgg agcggcgttc agcgagtgac gtgcctgcgg gtcatgtcgg cctgatccga
     1621 cccttctcca tccgctggtc ggaatttgca gggtatttcc gcatttcccg caatttccgc
     1681 taacgatttt cacgccgctt ccagggctgg gttgacctgc cagcgcctgg ccgggcggcc
     1741 gggtcctctg tcctcgcagc gatcgggacg gacgaagccc aggaagtgca ggcggtagag
     1801 cacctggtcg gtgtcgttgg cattgacggt ctgacccagc gcccgccgcc tgatgtcctc
     1861 gcgcgacacg accgcggtgc cctcttcctt gagccagcgg gcgacccgcc tcacccggcg
     1921 ctcgaagtcc gacggcatcg cgcgatcgaa taccgcgcgg gcgtgtgggc ggaagtagct
     1981 cgcccagaga gaagcggccg cctcgacctg atcgcggccg ataggaccgg gcagacccgg
     2041 cccgccgccg cccgaccagg cgagaagctc cagcgccacg gccagccgcg tcaccgtcgc
     2101 gggccccttg cccagccagg ctgcgtccag gccttcggtg ttgcggagct cggcatgcag
     2161 gcggctaagg aaaccgtcga aggccttgac gccacgcgcg tcgaacgaca gcaccagcgg
     2221 atcgtccggc gtgcgcgcca ggcggctgac gcggcgcagc atttttagcg cttcgtcgtc
     2281 gcgggcgatc ttgcgatcgg ccagcgaacg gtaaggttgc gcgccgggcc aggcatggag
     2341 aaagcacgcc gccaggccgt catcgctctc gtgcagcgtc tcctgcagcc ggtccggctg
     2401 gatggtgccg aggatgctga ccggaaaatt ccccagctgc agcggcgcct gggcgcgctg
     2461 ccggtcgatc gtgacggccc cggcggccca cgcttgccgc caatggacgc aatcgtccct
     2521 tcggcttcgc tcagggcagg cgccgagttc gccgagccaa gccgacgcct cgtcgcgcca
     2581 cacgatcacg ccgcgcggat tggctcggac gatgtcgccg atggcttcga gtgtgatttc
     2641 ggtagtgacg acctgcgacg gcacgaacgc ttcggcgatg ccggcccgct tggcgccctc
     2701 cgcgtgatgc tcccgtcgcc cgtcgtcgtg cgcgcgccgt tcctcctcga tcgaaccgag
     2761 cagccgctgc atcgatgcca gcgcgcgcga cttgccgctg gacggcccgc cgaccgccat
     2821 ctgccacagc accagcggct cggaccagac cggcgtgatg cgcaccgcca cgccggcgcc
     2881 gcagaggccg gcgagacctg ccagcactgc ctgcaccaca taatccgcgg gcgcgccggc
     2941 cgacgaggcc gtgtcgttca cccagtcgcg ccacggttgg ggcaccagat cgagcggaaa
     3001 cggcggaacg gcgccgcgct tttcctccag gacgctgagg tcgatctcgg gccagcctgc
     3061 cgtgggcgag gccaggtcag ggtcgagagc aaaaacggac atgacgccgg tcctcctgtg
     3121 gtgtgtcgaa ccacataggc cggatcgtaa gtgttgtcaa ttgttaagtt cagttttact
     3181 aggactatcg tcgaattaac tcgagctgcc acggtcgtcg atgcgatggt acgcacgtcc
     3241 acaccatctg gctgacgacg attcgcgaac ggtcggcggc tcggaagccc cagagcctgt
     3301 tgcggttgga gaatcagatt tcgccgggcg cgcgccactg caacgacatc caagtgcacg
     3361 cttgaaagaa ttaaagccag ttgaatgtgc taaaactcac cgaagttcgg acccgatgta
     3421 ctcagggtgc aggtggggaa gccgagcaaa ggccaacttc taccatcgct agaagtgtcg
     3481 cctgaacggt agatcagttg gaaaaatttg cagtgcggtc gcccggttcg ctgacgccgc
     3541 ctctggcgga tgttgtgtcg ccccatgggg gacctctatg atcagaacct cgtccatcga
     3601 aaattctgga gggcctttga cgcgtgagca ccgccgccta gccgctgtcg tagcggccga
     3661 cgtcgtgggt tactcgcggt tgatgagccg tgacgaggcc ggcacgctgg cgcggctgaa
     3721 ggccaatcgc caggagcggc tcgaaccggc gctcgcccgc aatggcggcc ggctggtcaa
     3781 gctgaccggc gacggagcac tggtcgagtt ctcgagcgcg gtcgacgcgc tacgcgccgc
     3841 catcgaggtc cagcaggcca tctccgacgc caacagcgat caaccggaag atgaacgcat
     3901 cgtgttccgc atcggtattc atcttggcga cctgattgtc gacgacgatg acctctatgg
     3961 tgacggcgtg aacgtcgccg cccgcctgga ggccgaagcg ccggcgggcg gcatcctcgt
     4021 atcccgcgct atccgcgagg cggtcgatgg ccggctcaag gccaagctgc acgccttggg
     4081 cgatctggcg ctgaagaaca tcgagcggcc ggtccgcgct ttccgcgtcg aatgggaggc
     4141 cgccgactgg cgctcggtgt cgacggtgcc catcaattcc acaaaaaccg tgcctgccgc
     4201 tgcatcgccc cgcgccgcgc tcgacaagcc gtccattgcc gtcctgccgt ttcagaacat
     4261 gagcggcgat ccggagcagg aatacttcgc cgacggcatg gtcgag
//
LOCUS       DASWGA010000680         2143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1726567, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000680 DASWGA010000000
VERSION     DASWGA010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1726567"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..881)
                     /locus_tag="VF991_15825"
     CDS             complement(<1..881)
                     /locus_tag="VF991_15825"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9557963.1"
                     /translation="MKRRHWLAAAAIAVIPRLGRAQAFPERPLRFVVPYAPGGSTDTS
                     ARIVAEKLSVLFGQPVIVDNKPGGGTIIGTEIVAKAKPDGHTILLTPAALIANAAFGV
                     AVPYDIDKDLVPVVGFVDLPMLLAASNNAPFKSVAELLTWSKAAPGRTVAYASAGIGS
                     LTHLWGEYVKARTAMPLEHVGYKGSAEALRDVIAGHVPLFADVLVPTATAIRAGQVRG
                     LAVAMAARSSLLPDVPTVSEAGLPGMEGSVPFGISVPGGTPAPLVRQLNAAFNEAMAD
                     PQTRRKLVELGFVPIGGA"
     gene            962..>2143
                     /locus_tag="VF991_15830"
     CDS             962..>2143
                     /locus_tag="VF991_15830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9557964.1"
                     /translation="MARDGQGLEVSNANAAAIAALDFLTAEWLAFGNRLAEFITIADK
                     EESCALLPVMAANLVLSMNSAEGQEAARRYLARAQALAKGGEDANDRERAWLAATAAW
                     LAGETDRSLAIHEAMAADWPRDLLAGKLGQLHAFNHGDSEALLRIGERLFAANQDNRY
                     VHAMYAFGLEECNRIDEAEAAARQALAIDRRDPWAHHAIAHCLEARGKMLEGVAFLQS
                     MTDTWESCNSFMYTHNWWHLALFLIDLDRTDEALGLYDRRVWGVWKEFSEDQINAVSL
                     LARLELRGVDVGERWADVALYLKPRLHEHFSPFLDLQYLYGLARAGEHSAVTEMLASL
                     EERAENARAFEREAWADCAVPAAHGLAAYAKGDFAEAARLLGQAMPHLQPIGGSIAQR
                     EL"
BASE COUNT          341 a          746 c          746 g          310 t
ORIGIN      
        1 gcgccgccga tcggaacgaa gccgagctcg acgagcttgc ggcgcgtctg ggggtcggcc
       61 atcgcctcgt tgaacgcggc gttgagctgc ctgaccagcg gcgccggcgt gccgcccggc
      121 acggagattc cgaacggcac cgagccttcc atgccgggca atccggcctc gctcaccgtc
      181 ggcacgtcgg gcagcaggct cgagcgcgcc gccatcgcca ccgcgaggcc gcgcacctgg
      241 cccgccctga tcgccgtcgc ggtcggcacc agcacgtcgg cgaacagcgg cacgtggccg
      301 gcgatgacgt cgcgcaacgc ctcggcgctg cccttgtagc cgacatgctc gagcggcatg
      361 gcggtgcgcg ccttgacgta ctcgccccac aaatgcgtga ggctgccgat gccggccgag
      421 gcgtaggcga cggtgcggcc gggcgcagcc ttcgaccagg tcaaaagctc ggccaccgac
      481 ttgaacggcg cattgttgct ggctgccaga agcatcggca ggtcgacgaa gcccacgacc
      541 ggcaccaggt ccttgtcgat gtcgtagggc acggcgacgc cgaacgcggc attggcgatg
      601 agggcggcgg gcgtcagcag gatggtgtgg ccgtcgggct tggccttggc cacgatctcc
      661 gtgccgatga tggtgccgcc gcccggcttg ttgtcgacga tcaccggctg gccgaacaaa
      721 accgagagct tctcggcgac gatgcgggcc gaggtgtcgg tcgagccgcc cggcgcatag
      781 ggcacgacga agcgcagcgg gcgctcggga aaggcttgcg ccctgccgag ccgcggaatg
      841 acggcaatcg ccgccgcagc cagccagtgc cggcgtttca tttttcctcc cgaaattttg
      901 cccaacgtgc cacgccgtgc gaagcttggg caagggaacc ggggcagcaa gtggggcaag
      961 cgtggcgcgg gacggtcaag gtctggaggt cagcaacgcc aatgcggcgg cgatcgccgc
     1021 gctcgatttc ctgaccgccg agtggctggc cttcggcaac cggctggccg aattcatcac
     1081 catcgccgac aaggaagaga gctgcgcgct gttgccggtg atggcagcca acctcgtcct
     1141 gtcgatgaac tcggccgagg gtcaggaggc ggcgcggcgc tacctcgccc gcgcccaggc
     1201 actcgccaag ggcggcgagg atgccaacga ccgtgagcgc gcctggctcg ccgcgaccgc
     1261 ggcctggctg gcgggcgaaa ccgaccgcag ccttgcgatc cacgaggcca tggccgccga
     1321 ctggccgcgc gacctgttgg ccggcaagct cggtcagctc cacgccttca accacggcga
     1381 ttcggaagcc ctgctgcgca tcggcgagcg cctgttcgcg gccaaccagg acaaccgcta
     1441 cgtccacgcc atgtatgcgt tcggcctgga ggaatgcaat cgcatcgacg aggccgaggc
     1501 cgcggcgcgc caggcgctgg cgatcgaccg gcgcgatccg tgggcgcatc acgccatcgc
     1561 ccattgcctg gaagcgcgcg gcaagatgct ggagggcgtg gccttcctgc aatcgatgac
     1621 cgacacctgg gaaagctgca actccttcat gtacacccac aattggtggc atctcgcgct
     1681 gttcctgatc gacctcgacc gcaccgacga ggcgctcggc ctgtacgatc gccgcgtctg
     1741 gggcgtgtgg aaggaattct ccgaggacca gatcaacgcc gtctcgctgt tggcgcgcct
     1801 cgagctgcgc ggcgtcgatg tcggcgagcg ttgggccgac gtggccctct atctcaagcc
     1861 gcgcctgcac gagcacttct cgcccttcct cgacctgcaa tatctctacg gcctggcccg
     1921 cgccggcgag cacagcgccg tcaccgaaat gctggcgagc ctggaggagc gtgccgagaa
     1981 cgcgcgagcc ttcgagcgcg aggcgtgggc cgactgcgcc gtgccggccg cgcacgggct
     2041 cgccgcctac gccaagggcg attttgccga ggcggcgcgg ctcctcggcc aggccatgcc
     2101 gcacctgcag ccgatcggcg gcagcatcgc ccagcgcgag ctg
//
LOCUS       DASWGA010000681         9998 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1340843, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000681 DASWGA010000000
VERSION     DASWGA010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9998
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1340843"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VF991_15835"
     CDS             <1..298
                     /locus_tag="VF991_15835"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX9557965.1"
                     /translation="MVVEKRHSSAFHDTDLHRRLGDAGIDRLVIAGMQTEMCVDSACR
                     GAAALDYRVVLVADAHTTYDTPVLGADLIIAHHNRLLGRGFVELAEARQVRFQE"
     gene            301..1599
                     /locus_tag="VF991_15840"
     CDS             301..1599
                     /locus_tag="VF991_15840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013533446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9557966.1"
                     /translation="MSIQTVLDPTSDLVEQAKRVLPGGSFGNMPAEVILKEGKGGRIW
                     DEAGREYVDFLLGSGPMFVGHGHPEVTAAIQAQVPLGTTFFGNNRHGIALAEAICDAV
                     PCADQVRFVCSGTEADLYAMRAARAFRKRDKILKFEGGYHGMSDYALMSLAPKRPGNF
                     PRPTPDSAGIPKSVQDEMLVAAFNDVGMAESLIEEHKDELAGVIVEPFQRLIPPKPGF
                     LQALRAVTAKHGIPLIFDEVVTGFRFAYGGAQEYYGVTPDLCSLGKIVGGGFALAAVA
                     GRADIMKHFDRLAMEDEDFIFQVGTLSGNPVAAVAGLATLEVLRRPGAYKQVFATGRE
                     LMSALSEIVKQAGIKAQVIGEPPLFDIYFTDQPIKDYRDTLRADAAMAKRFNQLLRAR
                     GIMKGESKYYVSLAHDRADMDHTISAWADAIQELQSSRAG"
     gene            complement(1680..2066)
                     /locus_tag="VF991_15845"
     CDS             complement(1680..2066)
                     /locus_tag="VF991_15845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014287272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9557967.1"
                     /translation="MAMSRPRIEHVNLTVTNPERAAELMEALFGWRVRWRGAARDGGY
                     TIHVGSDDHYIALYTGRNVAYTADDFAKGRPLNHIGVEVDDLDATEARVVAAGLTPFS
                     HGDYEPGRRFYFLDPDGIEYEVVSYH"
     gene            2155..2622
                     /gene="soxR"
                     /locus_tag="VF991_15850"
     CDS             2155..2622
                     /gene="soxR"
                     /locus_tag="VF991_15850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006338556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HEX9557968.1"
                     /translation="MTPASLLSIGQLSQRTGMSVSAIRFYEARGLVRAIRTSGNQRRF
                     MRSDIRRLSFALTAQQLGLTLTEIEAELATLPQGRAPTRQDWQAISKRIRGALQARIE
                     MLEKTRDLLDSCIGCGCLSLDRCALYNPNDRAARAGAGPRFLLGDRVQDFDDA"
     gene            complement(2746..3492)
                     /locus_tag="VF991_15855"
     CDS             complement(2746..3492)
                     /locus_tag="VF991_15855"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX9557969.1"
                     /translation="MRVLLIALFALAAIAPASAADLKLLTAGAFKSVALELVPEFEKK
                     TGHKVTIENDTAGGLARRIAGGEYFDVVVLPPAALAPLLGSKAVESSVKPLARVGIGV
                     AIKQGAPVPDISTVDAWKQSLLAARAIAYTDPASGGTAGIYLAKLFEKMGIAEQLKPK
                     SVLVKGGLAAEKIVSGEAEIAMQPASELLAVPGVVLVGPIPLEVQTYIIYAGAVSTAA
                     RDQGAADALLAALHGPDKAALLKKKGMELP"
     gene            complement(3501..4424)
                     /locus_tag="VF991_15860"
     CDS             complement(3501..4424)
                     /locus_tag="VF991_15860"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEX9557970.1"
                     /translation="MRIAVVGAGGVGGGYGAALARAGADVTFIARGAHLAAMKSKGLK
                     VESPRGDTHLKPTQATDEPASVGPVDVVLFCVKLWDVESAGAAIKPIVGKGTAVIPLQ
                     NGVDAAERLAPIVGKQAVMGGVANISATIAEPGVIRQTGTVMRMVFGELDGTQSARAE
                     AFAALCGKAGIEGVPSQSILADLWMKFILLASNASMMALTRLPIGKLRDDPDIAPWFT
                     AAYEEVAAVGRAAGVALPADAVDKTLNFNRNAPSHLMASMAVDLLRGNRIELPWLSGK
                     VVELGRKHGVPTPTHAFMYAALKPYIMGAPA"
     gene            complement(4409..5107)
                     /locus_tag="VF991_15865"
     CDS             complement(4409..5107)
                     /locus_tag="VF991_15865"
                     /inference="COORDINATES: protein motif:HMM:NF017747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HutD family protein"
                     /protein_id="HEX9557971.1"
                     /translation="MTRKYGLKKFASRIANRWRTHLGTPVGFGRLMADHRRDRADGKE
                     TMNQAVIAPLDPSRYLRTPWKNGGGVTIDIAFDGDVWRFSRTPITVAGPFSDYTGFDR
                     MQVLVAGSGLVLQTPAGDIDVRRPFEPVRFAGETPIVSRLEAGPVEVINLMGDRSRVR
                     IDLFVVSANTTRRLGPGLHIAYCPTGRATLKLEGEEHDLQADGGLRIEETNGTVATCS
                     AGRIVMGSVACVSR"
     gene            complement(5159..6346)
                     /locus_tag="VF991_15870"
     CDS             complement(5159..6346)
                     /locus_tag="VF991_15870"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9557972.1"
                     /translation="MSYDAPFAGLKVIDLSQGIAGPYCAMLLAQHGAQVIKVEGIGEG
                     DWARTLGTRYGSHSAFSIIGNLGKRSIAVDLKSETGKQVLWRLLRGADVFLEGFRPGV
                     IGRLGFDYDSIAAREPRLLYLSLSGFGQSGPLAERPAMDPVLQAYTGLMIENRGEDGI
                     PHRVPVIVVDMSTALYAFQALSAALYARRDETAGRYIDVSLMQAATALQSIRLMASHL
                     EGGTMKPGGAAVGVFKIADGWMSMVAINDRDWRSLCTAMERPEAADDPRFATQAGRLA
                     NDVALHAIVRPALEAQPWLVWRKRLTEARIMHERLNSYAEFLDQPQVRETGLIQWLTQ
                     AGLNRPVPMPALPGMLPQADGTPRGTAPVTGQHTAAILAEHGYSTSEIEALLAQGVVA
                     NSE"
     gene            complement(6399..9437)
                     /locus_tag="VF991_15875"
     CDS             complement(6399..9437)
                     /locus_tag="VF991_15875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9557973.1"
                     /translation="MNGFNLSEWALRHRSFIWYLMAAIVVAGALSYTRLGRQEDPSFT
                     IKSMVVQASWPGAMVEEMTNQVTDRIERKLQELGSLDFTKSYTTSGQTTVFVNLKDDT
                     PSREIPGIWVQVRNKVNDVKPDMPSGVQGPYFDDQFGDVFGNIYALTSDGLSFRQLRD
                     YAEQARGQILKLPGAGKVELLGVQDEVVHLNFSTRHIAGLGVDQQSVLTSLQQQNAVA
                     PSGIVQAGPETVSLRVSGQFTSIDSLRAVNIRVNDRFFRLSDVATITRGYVDPPQPLF
                     RFNGQPAIGIAIGMKANSNLIEFGKRLQAHMKEVVAQLPIGVGVHLVSNQPAVVDQAI
                     GGFTRALFEAVVIVLVVSFLSLGLRAGLVVAIAIPLVLAATFVFMDYSGIILQRISLG
                     ALIIALGLLVDDAMISVEMMVARREAGDSLERAATFAYSSTAFPMLTGTLVTVAGFVP
                     IGLNGSSAGEYTFTLFAVIAAALLISWVVAVLFTPLLGVTMLPPTAMSEKASPPRLKA
                     WLQPLLLGAMRWRWLTIGLALVLFALSCVGLGFVQKQFFPAADRPELLVDMTLLQSSS
                     IAETKTEMDRLEKALVGDQDIVRWSSYVGQGAVRFYLPLDEQLANPFFGQVVIVSRDF
                     DARQRVAARLKKLLREEFVGIDGFVHPLDLGPPVGRPIQYRLSGPDIQTVRGLALKFA
                     EVMASNPRVGGIVYDWNEPGLVLRIDVDQNRARQLGVSSQDIATMLNNVVGGSAITQM
                     YDSIYLINIVARADRAERVAIETFQGLQLAGRGGEPVPLPAIATVQYQIEQPIVWRRD
                     RQPTITLQASVLGDEQPATVVNQLKPAVARFTAELPATYSIAVGGTVEESAKGERPIA
                     DVVPLMLFLMATVLMMQLHSVQKLFLVVSVAPLGLIGVVAALLITGQPLGFVAILGVL
                     ALIGIIIRNTVILVTQIDAFRADGLAPWNAVVEATLHRMRPILLTAAAASLGMIPIAR
                     EVFWGPMAFAMIGGIVVATLLTLLFLPALYVTWYRIKESK"
     gene            complement(9434..>9998)
                     /locus_tag="VF991_15880"
     CDS             complement(9434..>9998)
                     /locus_tag="VF991_15880"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9557974.1"
                     /translation="DFDGVVTARYAEPGQVLTAGQKVLTLARPEIREAVIAVPNDLAD
                     TLSHANDLAMTVDLDQTVSMKVAAVRGVDPTADPNTRTRKVFLTLNDPPAAFRLGITI
                     AVTMTRPVSPRIDLPPTALLEKNGKSFVWAVEPAKNTVALREVSVLSRSDDAVTVAAG
                     SGIAAGERIVIAGVHSLTPGQVVKVMP"
BASE COUNT         1671 a         3308 c         3351 g         1668 t
ORIGIN      
        1 gatggtcgtc gagaagcgcc atagcagcgc gttccacgac accgatctgc atcgacgcct
       61 cggcgatgcc ggcatcgatc ggctggtcat cgccggcatg cagaccgaga tgtgcgtcga
      121 ttccgcctgc cgcggcgcgg cggcgctgga ctatcgtgtc gtgctggtgg ccgacgctca
      181 cacgacgtat gacacaccgg tgcttggcgc agacctcatc atcgcccacc acaatcgcct
      241 gcttggccgc ggcttcgttg agttggccga agcccggcag gttcgctttc aggagtagcc
      301 atgagcatcc agaccgtcct cgatcccacc agcgacctcg tcgagcaggc caagcgcgtg
      361 ctgccgggcg gcagcttcgg caacatgccg gccgaggtga tcctgaagga gggcaagggc
      421 gggcgcatct gggacgaggc cggccgcgaa tatgtcgatt ttcttttggg ctccggaccg
      481 atgttcgtgg gccacggcca tcccgaggtg acggcggcga tccaggcgca ggtgccgctc
      541 ggcacgacct tctttggcaa caaccgccac ggcattgcgc tggccgaggc gatctgcgac
      601 gccgtgccgt gcgccgacca ggtgcgcttt gtctgctccg gcaccgaggc cgatctctac
      661 gccatgcggg cggcccgcgc cttccgcaag cgcgacaaga tcctcaagtt cgagggcggc
      721 tatcacggca tgagcgacta tgcgctgatg tcgctggcgc ccaagcggcc cggcaacttc
      781 ccgcgcccga cgcccgattc ggccggcatc cccaagtcgg tgcaggacga gatgctggtg
      841 gcggcgttca atgacgtcgg catggccgaa agcctgatcg aggaacacaa ggacgagctc
      901 gcgggcgtga tcgtcgaacc gttccagcgc ctgatcccgc ccaagccggg cttcctgcag
      961 gcgctgcgcg cggtgacggc caagcatggc atcccgctga tcttcgacga ggtcgtgacc
     1021 ggcttccgct tcgcctatgg cggagcccag gaatactacg gcgtcacgcc cgacctctgc
     1081 agcctgggca agatcgtggg cggcggcttc gcactcgccg ccgtcgccgg ccgcgccgat
     1141 atcatgaagc acttcgaccg gctggcgatg gaagacgagg atttcatctt ccaggtcggc
     1201 accctctcgg gcaatcccgt cgccgccgtg gccggcctcg ccaccctcga agtcttgaga
     1261 cgacccggcg cctacaagca ggtgttcgcc accggccgcg aactgatgag cgcgctgtcg
     1321 gagatcgtga agcaggctgg catcaaggcc caggtgatcg gcgaaccgcc gctgttcgac
     1381 atctacttta ccgaccagcc gatcaaggac tatcgcgata cgctcagggc cgacgccgcg
     1441 atggccaagc gcttcaacca gcttttacgc gcccgcggca tcatgaaggg cgagagcaag
     1501 tactatgtaa gcctggccca cgatcgcgcc gacatggacc atacgatcag cgcgtgggcg
     1561 gacgcgatcc aagagctcca gtcatcgcgg gcggggtaac ccccgccccg gagcgcagca
     1621 aaaggatctc atcccactta cgtcgcattg aatgcgaacg aagtcctggc ggtcggactt
     1681 cagtgatagc tgacgacctc gtattcaatt ccgtcgggat caaggaaata gaaccggcgc
     1741 ccgggttcgt agtcgccatg agagaagggt gtaaggccag cggccacgac tcgcgcctcg
     1801 gtggcatcga gatcgtcgac ttcgacgccg atgtggttga gaggccgccc cttggcgaag
     1861 tcgtccgctg tataggccac gttgcgtccc gtatagagcg caatgtagtg atcgtccgat
     1921 ccgacatgga tcgtgtaacc gccgtctcgc gccgcgccgc gccagcgtac gcgccagccg
     1981 aacaatgcct ccatcagttc ggcagcgcgc tcggggttcg tgacggtgag gttcacgtgt
     2041 tcgatgcgtg gtctggacat cgccatgggc tcctctggaa aagctccgaa ttgctcattt
     2101 gcggatcgta caatctcaag ttaacttgag gtcaagcatt ttggcggagg taccgtgacg
     2161 ccggcatcgc tgctgtcaat cggccaactc tcccagcgaa cgggcatgtc cgtttcggcg
     2221 attcgtttct atgaggcgcg gggtctcgtg agggcgatcc gcacgagcgg caatcagcgg
     2281 cgcttcatgc gctcggatat ccgacgtctt tcgtttgcgc tgactgccca gcaactcggg
     2341 ctgacgctca cggaaatcga ggccgagctt gcgacgctgc cgcaaggccg agcgccgaca
     2401 cggcaggatt ggcaggcgat cagcaagcgc atccgaggtg cgctccaggc aaggatcgag
     2461 atgctcgaga agacccgcga tctgctggac agctgcatcg gctgcggatg tttgtcgctc
     2521 gaccgatgcg ccctctacaa ccccaacgac cgcgccgcgc gagccggggc agggccgcgt
     2581 tttttgttgg gcgatcgggt gcaagacttc gacgatgcct agttccgcga aatggttgcc
     2641 agcgccgggc ttcgaagcca tgcgcatttt catttcatgc cgtggcaagc ggcgatgagg
     2701 tccttcgctt cagcgcggat ctgatccgcg cgactcagga cgacgtcacg gcagctccat
     2761 tcccttcttc ttgagcagcg ccgccttgtc cggcccgtgc agggcggcga gcaatgcgtc
     2821 ggccgcgccc tggtcgcgcg cggccgtgct cacggcgccg gcatagatga tgtaggtctg
     2881 cacctcgagc gggatgggcc ccaccaggac cacgccgggc acggccaaaa gctcgctcgc
     2941 cggctgcatg gcgatctcgg cttcgccgct cacaatcttc tcggcggcca ggccaccctt
     3001 caccagcacg ctcttgggtt ttagttgctc ggcaatgccc atcttctcga acagcttggc
     3061 aagatagatg ccggcggtgc cgcccgacgc cgggtcggtg taggcgatgg cccgcgccgc
     3121 cagcaggctt tgcttccagg catcgacggt ggagatgtcg gggacgggcg cgccctgctt
     3181 gatggcgacg ccgatgccga cgcgggcgag cggtttcacg ctgctttcaa cggccttgct
     3241 gccgagcaat ggcgccagcg ccgccggagg cagcacgacg acgtcgaaat actcgccgcc
     3301 cgcgatgcgc cgcgcgagtc cgcccgctgt gtcgttttcg atcgtgacct tgtgtccggt
     3361 cttcttttcg aactccggca ccagttccag cgccaccgac ttgaaagcgc cggcggtcag
     3421 cagtttcagg tcggcggccg acgccggggc gattgcggcg agggcaaaca gggcgatcag
     3481 caaaacgcgc atggtttctc ctaggcaggc gcacccatga tgtagggttt taacgccgcg
     3541 tacatgaagg catgagtggg cgtgggcacg ccgtgctttc ggcccagctc gaccaccttg
     3601 cccgacagcc acggcaattc gatgcgattg ccgcgcaaaa ggtcgacggc catcgaggcc
     3661 atgaggtggg atggggcatt gcggttgaag ttcagcgtct tgtcgacggc atcggcgggc
     3721 agggcgacgc ccgccgcgcg gccgaccgcg gccacttcct cgtaggcggc ggtgaaccag
     3781 ggtgcgatgt cgggatcgtc gcgcagcttg ccgatcggca gccgggtcag cgccatcatg
     3841 ctggcgttcg atgcgagcag gatgaacttc atccagaggt cggccaggat cgattggctc
     3901 ggcacgccct cgatgccggc cttgccgcac agcgccgcga acgcctcggc gcgggcgctc
     3961 tgggtgccat cgagctcgcc gaacaccatg cgcatcaccg tgccggtctg gcggatcacg
     4021 ccgggctcgg cgatggtggc gctgatattg gcgacaccgc ccatcacggc ttgcttgccc
     4081 acgatcggcg ccagccgctc cgccgcatcg acgccgttct gcaaagggat gacggcggtg
     4141 cccttgccca cgattggctt gatcgccgcg cccgcactct cgacatccca gagcttcacg
     4201 cagaaaagca cgacatcgac cggccctacg gacgcaggct cgtcggtcgc ctgtgtgggc
     4261 ttgagatggg tgtcgccgcg cgggctttcg accttgaggc ccttgctctt catcgccgcg
     4321 agatgcgcgc cgcgggcgat gaaggtgacg tcggcgcctg ccctggccag cgccgcgcca
     4381 tagccgccgc cgacgccgcc cgctccgact accgcgatac gcatgccacg ctccccatta
     4441 cgatccgccc ggcgctgcac gttgcgaccg tcccgttcgt ttcctcgatc ctgagaccgc
     4501 catcggcctg caggtcatgc tcctcaccct caagcttcag ggtcgcccga ccggtcggac
     4561 aataggcgat gtgcaggccc ggccccaagc gccgcgtggt gttggcgctc acgacaaaaa
     4621 gatcgatgcg cacccggctg cgatcgccca tcaggtttat gacttcgacc ggcccggcct
     4681 ccagtcggct cacgatcggc gtctcgccgg cgaagcgcac cggctcgaag ggccggcgca
     4741 catcgatgtc gccggcgggt gtttgcagca ccaggccgga tccggccacc agcacctgca
     4801 tgcggtcgaa gcccgtatag tccgagaagg gtccggcaac ggtgatgggc gtacggctga
     4861 agcgccacac atcgccgtcg aaggcgatgt cgatggtgac gccgccgccg ttcttccagg
     4921 gcgtgcgaag gtaccggctg ggatcgagag gagcgatgac ggcttggttc atggtttctt
     4981 tcccgtcagc gcgatctctt cgatgatctg ccatcaacct tccgaaccct acgggagtgc
     5041 cgagatgggt ccgccaccga ttggcgatcc gcgacgcaaa tttcttcagg ccgtacttcc
     5101 tggtcatgcg cgcccacagc tcggcctccg acggccacgg cttttttcgc cacgctcttc
     5161 attcgctgtt ggcgactacg ccctgcgcaa gcagcgcttc gatctcgctg gtgctgtagc
     5221 catgctcggc caggatcgcg gcggtatgct ggccggtgac cggcgccgtc ccgcgcggcg
     5281 ttccatcggc ctggggcagc atgccgggca gggccggcat cgggaccggc cggttcaaac
     5341 ctgcctgcgt gagccactgg atcaggccgg tttcgcgcac ctgcggctgg tccaggaact
     5401 cggcgtagct gttcagccgc tcgtgcatga tgcgcgcttc ggtgagccgc ttgcgccata
     5461 ccaaccacgg ctgggcctcg agcgccggcc gaacgatggc gtggagtgcc acgtcgttgg
     5521 cgagccgtcc cgcttgcgtg gcgaagcgcg gatcgtcggc cgcctccggc ctctccatcg
     5581 ccgtgcagag gctccgccag tcgcgatcgt tgatcgccac catcgacatc cagccgtcgg
     5641 cgatcttgaa cacgccgacc gccgcgccgc cgggcttcat ggtgccgccc tcgagatggc
     5701 tggccatcag ccggatcgat tgcagcgccg tcgccgcctg catcaggctg acgtcgatgt
     5761 agcggccggc cgtctcgtcg cggcgggcgt agagcgcggc cgagagcgcc tggaaggcgt
     5821 agagggcggt cgacatgtcg accacgatca ccggcacgcg gtgcgggata ccatcctcgc
     5881 cgcggttctc gatcatcagg ccggtatagg cctgcagcac cggatccatc gccggccgtt
     5941 cggccagcgg cccgctctgg ccgaagcccg agagcgagag atagagcagc cgcggttcgc
     6001 gcgcggcgat gctgtcatag tcgaagccca ggcgaccgat gacgccgggc cggaaccctt
     6061 cgaggaagac gtcggcgccg cggagcaggc gccacaggac ctgcttgccg gtctcgctct
     6121 tgagatcgac ggcgatgctg cgcttgccga gattgccgat gatcgagaag gccgaatggc
     6181 tgccgtagcg cgtgcccagc gtgcgcgccc aatcgccctc gccgataccc tcgaccttga
     6241 tcacttgagc gccgtgctgg gccagcagca tggcgcagta gggaccggcg atgccctggc
     6301 tgaggtcgat caccttcagc ccggcgaagg gcgcatcgta actcatgcga tgccaccata
     6361 gcgcgggtcc ggaccgggcg tcatcggacc gcgggacgct atttcgattc cttgatgcga
     6421 taccaggtga cgtagagcgc cggcaggaac agcagcgtca gcaacgtagc caccacgatg
     6481 ccgccgatca tggcgaaggc catcggtccc cagaagacct cgcgcgcgat cgggatcatg
     6541 ccgaggctgg cggcagccgc cgtgagcagg atcggccgca tgcggtgcag ggtcgcttcg
     6601 accacggcgt tccacggcgc gagaccgtcg gcgcggaagg cgtcgatctg ggtcaccagg
     6661 atcaccgtgt ttcggatgat gatgccgatc agcgccagca cgcccaggat ggcgacgaag
     6721 cccaacggct ggcccgtgat gagcagcgcc gccacgacgc cgatcaggcc gagcggcgcc
     6781 acgctcacca ccaggaacag cttctgcacg ctgtgcagct gcatcatcag cacggtcgcc
     6841 atcaggaaca gcatcagcgg gaccacgtcg gcgatcggcc gctcgccctt ggcgctctcc
     6901 tcgaccgtgc cgccgacggc gatcgagtag gtggccggca gctcggccgt gaacctggcg
     6961 acggcgggct tgagctggtt caccacggta gcgggctgct cgtcgcccag cacggaagcc
     7021 tgcagggtga tggtgggctg gcggtcgcgc cgccacacga tcggttgctc gatctggtac
     7081 tgcacggtgg cgatggcggg cagcggcacc ggttcaccgc cgcggccggc gagctgcagg
     7141 ccctggaagg tctctatggc tacgcgctcg gcgcggtcgg cacgggccac gatattgatc
     7201 aggtagatgc tgtcgtacat ctgggtgatc gccgagccgc cgaccacgtt gttcagcatg
     7261 gtggcgatgt cctgcgagga aacgccgagc tggcgcgcgc gattctggtc gacgtcgatg
     7321 cgcagcacca ggccgggttc gttccaatca tagacgatgc cgccgacacg agggttggac
     7381 gccatgacct cggcgaactt gagcgccagc ccgcgcacgg tctggatgtc gggcccgctc
     7441 agccggtact ggatcggccg gccgaccggc gggccgaggt cgagcggatg gacgaagccg
     7501 tcgatgccga cgaactcctc gcgcaacagc ttcttcaggc gcgccgcgac ccgctggcgg
     7561 gcgtcgaagt cgcggctgac gatcacgacc tggccgaaaa agggattagc gagctgctcg
     7621 tcgagcggca ggtagaagcg caccgcgccc tggccgacat aggagctcca gcgcacgatg
     7681 tcctggtcgc cgaccagcgc cttctccagc cggtccattt cggtcttggt ctcggcgatc
     7741 gagctgctct gcagcagcgt catgtcgacc agaagctcgg gccggtcggc cgccgggaag
     7801 aactgcttct gcacaaagcc cagcccgacg cacgacagcg cgaacaggac gagggcgagg
     7861 ccaatggtga gccaacgcca gcgcatggcg cccagcagca gcggctgcaa ccaagctttt
     7921 agccgcggcg ggctcgcttt ctcgctcatg gcggtgggcg gcagcatggt gacgccgagc
     7981 agcggcgtga acagcacggc gacgacccag gagatcagca gcgccgccgc gatcacggcg
     8041 aacagggtga aggtgtattc gccggccgag ctgccgttca gcccgatcgg cacgaagccc
     8101 gccaccgtga ccagggttcc ggtcagcatg ggaaaggccg tcgagctata ggcgaaggtc
     8161 gccgcgcgct cgagcgaatc gcccgcctcg cgccgcgcca ccatcatctc gaccgagatc
     8221 atggcgtcgt cgaccagcag gcccagcgca atgatcaggg cgccgagcga aatgcgctgc
     8281 aggatgatgc cggaatagtc catgaacacg aaggtggcgg ccagcaccag cgggatggcg
     8341 atcgccacca ccagcccggc gcgcaggccg aggctgagga agctcaccac cagcacgatc
     8401 accaccgcct cgaatagcgc gcgcgtaaag ccgccgatcg cctggtcgac gacggccggc
     8461 tggttggaga ccaggtgcac gccgacgccg atcggcagct gcgcgacgac ctccttcatg
     8521 tgcgcctgca ggcgcttgcc gaactcgatg agattgctgt tggccttcat gccgatggcg
     8581 atgccgatcg ccggctggcc gttgaagcgg aacaggggct gcggcgggtc gacataaccg
     8641 cgggtgatgg tggcgacgtc gctcagccgg aagaagcggt cgttgacccg gatgttgacg
     8701 gcgcgaaggc tgtcgatcga ggtgaactgg ccgctcaccc tgagactgac ggtctcgggg
     8761 ccggcctgaa cgatgccgga cggcgccacc gcgttctgct gctgcaggct ggtcagcacc
     8821 gactgctggt cgacgcccag accggcgatg tggcgggtcg agaagttgag atggacgacc
     8881 tcgtcctgca cgcccagcag ctcgaccttg ccggcgccgg gcagcttcag gatctgcccc
     8941 cgcgcctgct cggcatagtc gcgcaactgg cggaacgaaa gtccgtctga cgtcagcgca
     9001 tagatgttgc cgaacacgtc gccgaactgg tcgtcgaaat acgggccctg cacgcccgac
     9061 ggcatgtcgg gcttgacgtc gttcaccttg ttgcgcacct gcacccagat gccgggaatc
     9121 tcgcggctcg gcgtgtcgtc cttgaggttg acgaacacgg tggtctggcc ggaggtcgta
     9181 tagctcttgg tgaagtcgag cgagccgagc tcctgcagct tgcgctcgat gcgatcggtg
     9241 acctggttgg tcatctcctc gaccatggca cccggccagc tcgcctgcac gaccatcgac
     9301 ttgatggtga aggacgggtc ctcctggcgg ccgagccgcg tgtaggacag ggcgccggcg
     9361 accactatcg ccgccatcag gtaccagatg aaggaacggt ggcgcagcgc ccattccgaa
     9421 agattgaacc cgttcacggc atcaccttca cgacctgccc gggtgtcagg ctgtgcacgc
     9481 cggcgatgac gatgcgctcg ccggccgcga tgccgctgcc tgccgcgacc gtgaccgcat
     9541 cgtcgctgcg tgagaggacg ctcacctcgc gcagcgcgac ggtgttcttg gcgggctcga
     9601 ccgcccagac gaacgacttg ccgttctttt ccaacagcgc ggtcggcggc aggtcgatcc
     9661 ggggcgacac cggccgggtc atggtgacgg cgatggtgat gcccagccgg aaggcggccg
     9721 gcggatcgtt cagggtgagg aagaccttgc gggtgcgggt gttcggatcg gccgtcggat
     9781 cgacgccgcg cacggccgcg accttcatcg agacggtctg gtcgaggtcg accgtcatgg
     9841 cgaggtcgtt ggcgtgcgag agcgtgtcgg cgagatcgtt gggcacggcg atcaccgcct
     9901 cgcggatctc gggccgggcg agggtcagga ccttctggcc ggcggtgagc acctgccccg
     9961 gctcggcgta gcgtgcagtg acgacgccgt cgaagtcg
//
LOCUS       DASWGA010000682         3491 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1090019, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000682 DASWGA010000000
VERSION     DASWGA010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3491
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1090019"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..440)
                     /gene="gatC"
                     /locus_tag="VF991_15885"
     CDS             complement(123..440)
                     /gene="gatC"
                     /locus_tag="VF991_15885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012171367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEX9557975.1"
                     /translation="MSLDKDTVSRIARLARIKVAEEELAPLAGELSGILAWIEQLNEV
                     DTSNVEPLSSVSDVTLPMRADTVTDGGIAAKILANAPGGAVYIDPADKNAGGFFTVPK
                     VVE"
     gene            complement(539..3064)
                     /locus_tag="VF991_15890"
     CDS             complement(539..3064)
                     /locus_tag="VF991_15890"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX9557976.1"
                     /translation="MTDTIYALLAIAMVLTVVSLLVPLAERFRLPHTVLLAIAGMGLG
                     FLGSWIISGDIKLGALGDAFVGLDKLEVGTELFLPLFLPPLLFTAGLTIDVRRLLDEV
                     SAVLLLAIVAVLVSIAVVAGVVHLATGIDIVVCLLLGAVVSTTDPAAVIGIFRDVGAP
                     KRLSILAEGESLLNDAVAIAAFGLFMGMLVTAATPDLAEAAISADPTGVVGVFLREFL
                     GGLLFGFAMARGAMVLLPRLGESDAAVASVTVSLAYLSFVLADRYLHVSGVVSVVIAA
                     LTVAAYGPTHLHPRQWTALRQIWAQLEFWANCLIFVLASMVAANVLVHISWLYLWTVA
                     AVAVGALVARALVVFGMLPVLEKTRLVQPVDPRYKAILVWGGLRGAVTIVLAMVAAGD
                     QRLPENIRDFVALSATLFVLLTLFLNATTLGLAIRILGLNKLSRLELALRDRVLALSR
                     VNVDRHLQEIMRQHNERVEGIDADPASAGDAEIESVPAELALDLDERVKVGLVTLSTR
                     EKELYLELFEQQILSRRMVAVLAARADRLIDTVRDRGEAGYEEWLHNISRPDAGFRVA
                     LWLQRRLGFAWLLTERLADRFEILMVSQSMLAELAAFNVSSVADLLGPDAEVKLAAVI
                     GNRQKAVDSALKALSLQYPGYAESIQARQLERAAIRFESAEYARRLSEGIISREVYND
                     LRAQLAERRSAIGQRPPLDLGLELTEMIERVPIFESLDRTAVIAVGKQLRAVVALPDE
                     KIIRRGGPSDSMYFIAAGEVTVHTNFGPVVLKEGDFVGEMGLLSSQPRSADVTANGYA
                     HLLMLSRKDFRRLLDRRPAVRAEIEAVAARRIAETANEGQAAS"
     gene            3131..>3491
                     /locus_tag="VF991_15895"
     CDS             3131..>3491
                     /locus_tag="VF991_15895"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9557977.1"
                     /translation="MAKQAVFIHGMWATPDVWRNWRTFFEARGWQTLAPALRHHDAPP
                     QAPPSELGTTSLLDYVADLDALLRGLPDKPVVIGHSMGGLIALMLAARGLAQAGVLLT
                     PAAPAGVLAIRLSNLRAF"
BASE COUNT          601 a         1205 c         1183 g          502 t
ORIGIN      
        1 agcgcgcggt gctcgtcgag cttcttcaga tgcgcgtccg ccacctcgat ggcgctcgcc
       61 tttttctgcg ccagcaccgc cgtgagctcg gcaatggtga ggtcggtgag ggccgccatc
      121 gcctactcca ccaccttggg cacggtgaag aagccgccgg cattcttgtc ggcgggatcg
      181 atatagacgg cgccgcccgg cgcattggct aaaatcttgg cggcgatgcc gccgtcggtc
      241 accgtgtcgg cgcgcatcgg cagggtcacg tcggacaccg aggacagcgg ctcgacattg
      301 ctggtatcga cctcgttcaa ttgctcgatc caggcgagga ttcccgacag ctcgccggcc
      361 agcggcgcca gctcctcctc ggcgaccttt atgcgagcga gccgcgcgat gcgcgacacc
      421 gtatccttgt cgagcgacat gcctcttgct ccggaacgcg tgaacggcgc ggttggtagc
      481 cgttttgagg tacgctagca acccgctggg ggcgcgccac tggagtggcg cgccccaact
      541 aagacgccgc ctggccctcg ttcgccgtct cggcgatgcg gcgggcggcg acggcttcga
      601 tctcggcgcg gaccgccggg cgcctgtcca ggagcctgcg gaaatccttg cgcgacagca
      661 tcaggagatg ggcgtagccg ttggccgtca cgtcggcgct gcgcggctgg gagctcagaa
      721 gccccatctc gcccacgaag tcgccctctt tcagcaccac cggcccgaag ttggtgtgaa
      781 cggtgacctc gccggcggca atgaagtaca tggaatcgga tggtccgccc cggcggatga
      841 tcttttcgtc gggcagcgcg accacggcgc gcagctgctt gccgaccgcg atgacggcgg
      901 tgcggtcgag cgattcgaag atcggcacgc gctcgatcat ctcggtgagt tccaggccga
      961 ggtcgagcgg cggccgctgg ccgatggcgc tgcgccgctc ggcaagctgg gcacgcaggt
     1021 cattgtagac ttcgcggctg atgatgcctt cgctgagacg ccgcgcatat tccgccgatt
     1081 cgaagcggat ggcggcgcgc tcgagctggc gcgcctggat cgattcggcg tagcccggat
     1141 actgcagcga caatgccttg agcgcgctgt cgacagcctt ctggcggttc ccgatcaccg
     1201 cggcgagctt gacctcggcg tcggggccca gcaggtcagc gaccgagctg acattgaacg
     1261 ccgcgagctc ggccagcatg ctctgcgaga ccatcaggat ctcgaaacgg tcggccaggc
     1321 gctcggtcag cagccaggcg aaccccagcc gccgctgcag ccacaaggcc accctgaagc
     1381 ccgcgtcggg ccgagagatg ttgtgcagcc actcttcgta gccggcctcg ccacgatcgc
     1441 gcacggtgtc gatcaagcgg tcggcccgcg ccgccagcac cgccaccatg cggcgcgaca
     1501 ggatctgctg ctcgaacagt tcgagataca gttccttctc gcgcgtgctc aatgtgacca
     1561 ggcccacctt cacccgctcg tcgagatcga gcgccagctc ggccggcact gattcgatct
     1621 cggcgtctcc ggccgacgcc ggatcggcgt cgatgccttc gacccgctca ttgtgctggc
     1681 gcatgatctc ctgcaggtgg cgatcgacat tgacccgcga cagcgccagc acacggtcgc
     1741 gcagcgccag ctccaggcgg ctgagcttgt tcaggccgag aatgcggatg gccaacccca
     1801 gcgtcgtggc attcaggaag agagtgagca gcacgaacag cgtggccgac agcgccacga
     1861 aatcgcgaat gttctcgggc aggcgctggt cgcccgcggc caccatggcg agcacgatgg
     1921 tgacggcgcc gcgcaagccg ccccacacca ggatggcctt gtatcgagga tcgacaggct
     1981 gcacgagacg ggtcttctcc agcaccggca gcatgccgaa caccaccagc gcccgcgcaa
     2041 cgagggcgcc caccgccacg gcggcgacag tccagagata gagccagctg atgtgcacca
     2101 gcacgttggc cgccaccatc gaggccagca cgaagatcag gcagttcgcc cagaactcga
     2161 gctgcgccca gatctggcgc agcgccgtcc actggcgtgg atggaggtgg gtcggcccgt
     2221 aggccgcgac ggtaagggcc gcgatcacca ccgagacgac cccggaaacg tgcaggtagc
     2281 ggtcggccag cacgaagctg agataggcga ggctgacggt gaccgaggcg acggcggcgt
     2341 ccgactcgcc cagccgcggc agcagcacca tggcgccgcg cgccatggcg aagccgaaca
     2401 agagcccgcc caggaactcg cgcaggaaga cgccgaccac gcccgtcgga tcggcgctga
     2461 tggccgcctc cgccagatcg ggcgtggccg cggtcaccag catgcccatg aacaggccga
     2521 aggcggcgat ggcgacggcg tcgttcagga gcgactcgcc ctcggccagg atagacagcc
     2581 gcttgggcgc gccgacgtcg cggaagatgc cgatgaccgc cgccggatcg gtggtcgaca
     2641 ccacggcgcc cagcagcagg cagacgacga tgtcgatgcc ggtcgccagg tgcacgacgc
     2701 cggccacgac ggcgatgctc accagcaccg cgacgatggc aagcagcagc acggccgaga
     2761 cctcgtcgag caggcggcgc acgtcgatcg tcagcccggc ggtgaacagc aatggcggca
     2821 ggaacagcgg caggaacagc tcggtgccga cctcgagctt gtcgagcccg acgaaggcgt
     2881 cgcccagcgc gccgagcttg atgtcgcccg agatgatcca cgagccgagg aagcccagcc
     2941 ccatgccggc gatcgccagc aggacggtat gcggcaggcg aaagcgctcg gccagcggca
     3001 ccagcaggct caccaccgtc agcaccatgg cgatcgcgag cagggcgtag atcgtatcgg
     3061 tcacctgatc aacttactcc ggctgaagcg cgtgtcgacc gggatggccg gtcgccttat
     3121 aacctcgacg atggccaagc aggcagtctt catccacggc atgtgggcca cgccggacgt
     3181 ctggcgaaac tggcggacct tcttcgaggc gcgcggctgg caaaccctgg cgccggcgct
     3241 gcgccaccac gacgccccgc cgcaggcgcc gccaagcgag ctcggcacca ccagcctgct
     3301 cgactatgtg gccgacctcg acgccctatt gcgcggcttg ccggacaagc cggtcgtgat
     3361 cggccattcg atgggcgggc tgatcgcgct gatgctggcg gcgcgcggcc tggcgcaggc
     3421 cggggtgctg ctcacgccgg cggcgccggc gggcgtgctc gcgatccggc tgtccaacct
     3481 ccgcgccttc g
//
LOCUS       DASWGA010000683         4699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1468702, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000683 DASWGA010000000
VERSION     DASWGA010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4699
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468702"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2199)
                     /locus_tag="VF991_15900"
     CDS             complement(<1..2199)
                     /locus_tag="VF991_15900"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008595250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HEX9557978.1"
                     /translation="MYAELQVTTNYSFLRSGSHPGELVLQAIDLGHTAIGIADRNTLA
                     GVVRAYAAIKEYYEEHPTPPEKQITLLVGARLETRDGYSLLAYPTDLEAYKRLSRLLT
                     VGNRRAAKGECDLTFDDLAAHAEGILAIVLPPRRPEEPVFRERLRALARLFEDRCYLA
                     GTMLFRGDDARRLAELDNLATEMGVGLVATNDVHYHVPDRRALHDVVTAIRLGCTVDG
                     LGFRRFASAERHLKEPEEMARLFRRHPRAIERTQEIARRCTFSLDQLTYQYPVMYEGG
                     ETPIDKLVRLTWEGAAWRYPEGVPSEVANTIRHEFELIGRKQIAPYFLTVHEIVWQAR
                     KMGILCQGRGSAANSAVCYCLGITSVNPKEVKVLFERFLSNERDEPPDIDVDFEHERR
                     EDIIQWIYNEKGRSRAALAATVIAYRSRSAIREVGKALGLSPDTVGVMADTVWGMGSG
                     GVDVGHVREAGLDPADPRLMLALELSATLCGFPRHLSQHVGGFVLTEGRLDELVPIQN
                     AAMDDRTVVEWDKDDLDALRIYKVDVLGLGMLTCLRKSFALIEQHYGEKPHLGMDPVD
                     PAVFDMLCKADSVGVFQVESRAQMSMLPRLKPRTYYDLVVEVAIVRPGPIQGGMVHPY
                     LKNRAKDASEIEYPGKLRNILERTRGVPLFQEQAMQIAIDAAGFEPAKADKLRRAMAT
                     FRRAGTIHKLRDDFIYGMLKNGYDLEFAARCFKQIEGFGEYGFPESHAASF"
     gene            complement(2343..4001)
                     /locus_tag="VF991_15905"
     CDS             complement(2343..4001)
                     /locus_tag="VF991_15905"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HEX9557979.1"
                     /translation="MKRIVSLWFPKLSTDRLARAGRAPSTLDWSARAAATVVWRDGCP
                     RLAAVNPHARTAGLRPHMRLADSRALVPDLLTTAGEPQADRRLIETLANWCDRYTPWV
                     TIDPLGGAIAEEGTEACSAGGFGGDAGLLLDVSGCAHLFGQDEAGERALLADLVERLS
                     RHDLTCRAAMADSAGAAWALARFAERQADLFCPSHGQRAALAALPVEGLRLEAPILET
                     FLKLGLRRIGDLYPLPRAPLARRFGEQPLTRLDQALGTLAEPIEPRRPAPAFRTRLAF
                     VEPIGRSEDIAAATSRLLAALCRQFEQAGVGARRLEIALYRVDGSVDRTAIGTSRPNR
                     DNPKLMKLFEERLGELDPGFGVELMILAAPEVETFSGTQDALPETGTIAASVGEDGTI
                     DLADRLALRLGVENVARLLPRDSHLPERVQTTGVPARPAAAGAWRRLAAFKGARPTRL
                     LQRPEPVNVMAPIPDDPPRHFQWRQHTHRIVRAEGPERLADEWWRPRPDGSRPPANIV
                     PPFRDYYRVEDDDGGRFWLFRDGPYTKAANGQPTARWFLHGFCA"
     gene            complement(3907..>4699)
                     /locus_tag="VF991_15910"
     CDS             complement(3907..>4699)
                     /locus_tag="VF991_15910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557980.1"
                     /translation="PLAADLREKIRRLERAHSAQRVGQAAVPLDVPAIDALLPEGGLL
                     TGALHEIEAGPAPSGRVASHDGAALGFAAHLLGRFASRSAGTLLWCRRPSGASDAPPY
                     APALSAWFDPARLLMVTARRDEDLFWTMEEGLRCPGIAAVLGETRAADPTAGRRLSLA
                     AEKSGVSALLLRSQPAPPQSVCTTRWRIASAPSRSTPGLTDIGAARWQIELRRNRFGA
                     PSAAEIPSWLVEWNDETHCLAVVPQAFHGSTRESWARPFDSRLVG"
BASE COUNT          727 a         1561 c         1699 g          712 t
ORIGIN      
        1 gaagctcgcg gcgtggctct cggggaagcc gtattcgccg aaaccttcga tctgcttgaa
       61 gcagcgtgcg gcgaattcga gatcgtagcc gttcttcaac atgccgtaga tgaaatcgtc
      121 cctgagctta tgaattgtgc cggctcggcg gaatgtcgcc atggcgcggc gcagcttgtc
      181 ggccttggcg ggctcgaaac ccgcagcatc gatagcgatc tgcatcgcct gttcctggaa
      241 caagggcacg ccgcgtgtcc tttccaagat gttccggagt tttcccggat actcgatttc
      301 cgaagcatct ttcgcccggt tcttcagata gggatggacc atgccgccct ggatggggcc
      361 gggccgcacg atcgccacct cgacgacgag gtcgtaatag gtccggggct tcagacgcgg
      421 cagcatcgac atctgcgccc ggctctcgac ctggaacacg cccaccgaat cggccttgca
      481 cagcatgtcg aagacggcgg ggtcgacggg atccatgccg aggtggggct tctcgccgta
      541 atgctgctcg atcagcgcga agctcttgcg caggcaggtc agcatgccga ggcccagcac
      601 gtcgaccttg tagatcctga gcgcgtcgag atcgtccttg tcccattcga cgaccgtgcg
      661 gtcgtccatg gccgcgttct gaatcggcac cagctcgtca agccggcctt cggtcagcac
      721 gaagccgccg acatgctgcg acagatggcg cggaaagccg cacagcgtcg ccgacagttc
      781 gagcgccagc atgagccgcg gatcggccgg atcgagacca gcctcgcgca cgtgtccgac
      841 atcgacgccg cccgagccca tgccccacac cgtgtcggcc atcacgccca ccgtgtcggg
      901 tgacaggccg agcgccttgc cgacctcgcg gatggcgctg cggctgcgat aggcgatcac
      961 cgtggccgcc agcgcggcgc gcgagcggcc cttctcgttg tagatccact ggatgatgtc
     1021 ctcgcgccgc tcgtgctcga aatcgacgtc gatgtcgggc ggctcgtcgc gctcgttgga
     1081 caggaagcgc tcgaacagga ccttgacttc cttggggttc accgaggtga tgccgaggca
     1141 gtagcagacg gcggaattgg cggccgagcc gcggccctgg cacaggatgc ccatcttgcg
     1201 cgcctgccag acgatctcgt gcacggtgag gaaatagggc gcgatctgct tgcggccgat
     1261 cagctcgaac tcgtgccgga ttgtgttggc cacttccgaa ggcacgccct cgggataacg
     1321 ccaggccgca ccctcccagg tgaggcggac gagcttgtct atcggcgtct cgccgccttc
     1381 gtacatcacc ggatactggt aggtgagctg atcgaggctg aaggtgcagc gccgggcgat
     1441 ctcctgtgtg cgctcgatgg cgcgtggatg gcggcggaac agccgcgcca tctcctcggg
     1501 ctccttgagg tgccgctcgg cgctggcgaa gcggcggaaa cccagcccgt cgacggtgca
     1561 gcccagccga atggcggtga ccacgtcgtg cagcgcccgc cggtcgggca cgtggtaatg
     1621 cacgtcgttg gtggcgacca ggccgacgcc catctcggtg gcgagattgt cgagctcggc
     1681 caggcggcgc gcatcatcgc cgcgaaacag catggtgccg gcgagatagc agcggtcttc
     1741 gaacaggcgg gcgagggcgc gcaggcgctc gcggaagacg ggctcctcgg gccgccgcgg
     1801 cggcaggacg atggctaaaa tgccctcggc atgggctgca agatcgtcga aggtgagatc
     1861 gcattccccc ttcgccgccc ggcggttgcc gaccgtcagc aggcgcgaca gccgcttata
     1921 ggcttcgagg tcggtgggat aggcgagcag cgaatagccg tcgcgcgtct cgaggcgagc
     1981 accgaccagc agcgtgatct gcttttccgg cggtgttgga tgctcctcgt aatattcctt
     2041 gatcgccgcg taggcccgca ccacgccggc cagcgtgttg cggtcggcga tgccgatggc
     2101 ggtgtggccg aggtcgatcg cctgcagcac gagctcgccc ggatgcgagc cgctgcgcag
     2161 gaagctgtag ttggtcgtga cctgcagctc ggcgtacatg gttcacaact caaattcctc
     2221 tcccccgcta gggggagagg ttaggtgagg gggcaacgac gtgcgcatcc ccctcacccg
     2281 tcctctcccc ctagcggggg agaggagcct gattcggagg agcctgattc gacgattctt
     2341 cttcatgcgc agaaaccatg gaggaaccag cgggccgtcg gctggccgtt ggcggctttg
     2401 gtgtaaggcc cgtcgcggaa cagccagaag cggccgccat cgtcgtcctc gacccggtaa
     2461 tagtcgcgga acggcggcac gatgttggcc ggcggccggc tgccgtcggg ccggggccgc
     2521 caccattcgt cggccagtcg ctccggcccc tcggcgcgca cgatgcgatg ggtgtgctgg
     2581 cgccattgga aatggcgcgg cggatcgtcg ggtatgggcg ccatgacgtt gaccggctcg
     2641 ggccgctgca acagccgcgt cggccgcgcg cccttgaacg ccgccaggcg ccgccaggcg
     2701 ccggccgcgg cgggcctggc cgggacgccg gtcgtctgca cccgctcggg caggtggctg
     2761 tcgcgcggca acagccgcgc cacgttctcc acccccagcc gcaaggccag ccggtcggcg
     2821 aggtcgatcg tgccatcctc tcccacagag gcggcgatgg tgcccgtctc gggcagcgca
     2881 tcctgcgtgc cgctgaaagt ctcgacctcc ggcgcggcta aaatcatcag ctcgacgccg
     2941 aagccgggat cgagctcgcc cagtctctcc tcgaagagtt tcatcagttt ggggttatcg
     3001 cggttgggcc ggctggtgcc gatagccgtg cggtcgaccg agccgtcgac ccggtagagg
     3061 gcgatttcca gccggcgcgc gccgacgccc gcctgctcga actgccggca gagggcggcc
     3121 agcaggcggc tggtcgcggc ggcgatatct tcggatcggc cgatcggctc gacgaaggcg
     3181 agccgcgtgc ggaaggcagg cgccggccgg cgcggctcga tcggctcggc gagcgtgccc
     3241 agcgcctggt cgagacgggt gagcggctgc tcgccgaagc gccgcgccag cggcgcgcgc
     3301 ggcagggggt agagatcgcc gatgcggcgc agcccgagct tcaggaaggt ttccaggatc
     3361 ggcgcctcga gccgcagccc ttcgaccggc agcgccgcga gggcggcgcg ctggccgtgg
     3421 gacgggcaga agaggtcggc ctggcgctcg gcaaagcgcg ccagcgccca ggcggcgccc
     3481 gcgctgtcgg ccatggcggc gcggcaggtg agatcatggc gcgagaggcg ctcgaccagg
     3541 tcggccagca gggcgcgctc gcccgcctcg tcctggccga agagatgggc gcagccgctc
     3601 acgtcgagca gcaggccggc atcgccgccg aagccgccgg cgctgcaggc ttccgtgccc
     3661 tcttcggcga tggcgccgcc cagcgggtcg atcgtcaccc agggcgtgta gcggtcgcac
     3721 caattggcga gagtctcgat caggcggcgg tcggcctgcg gctcgccggc cgtcgtcagc
     3781 aggtccggca cgagggcgcg cgaatcggcc aagcgcatat gggggcgcag gccggcggtg
     3841 cgggcgtgag gattgacggc ggccagccgc ggacagccgt cgcgccagac gacggtggcg
     3901 gcggctctag ccgaccaatc gagagtcgaa ggggcgcgcc cagctctcgc gagtcgatcc
     3961 gtggaaagct tggggaacca cagcgagaca atgcgtttca tcgttccact ccacgagcca
     4021 ggacggaatt tccgcagccg acggcgcgcc gaagcggttg cgcctgagtt cgatctgcca
     4081 gcgcgcggcg ccgatgtcgg tgaggccggg cgtcgagcgc gacggcgccg aggcgatgcg
     4141 ccagcgcgtc gtgcacacgc tttgcggcgg cgccggctgg gagcgcagca gcagggcgga
     4201 cacgccgctc ttctcggcgg ccagcgacag gcggcggccg gcggtggggt cggcggcgcg
     4261 cgtctccccc aggacggcgg cgatgccggg gcagcgcagg ccctcctcca tcgtccagaa
     4321 caaatcctcg tcgcgccgcg ccgtgaccat cagcaggcgc gccgggtcga accaggcgga
     4381 aagcgccggg gcataaggcg gcgcgtcgga cgcgcctgac gggcggcggc accacagcag
     4441 ggtgcctgcg gatctcgatg cgaagcggcc cagcagatgg gcggcaaagc ccagtgccgc
     4501 gccatcgtgg gaggcgacgc ggccggaggg agcgggaccc gcctcgatct cgtgcagggc
     4561 gccggtcagc agaccgcctt cgggcagcag ggcatcgatc gccggcacat caagcggcac
     4621 ggcggcctgt ccgactcgct gggcgctatg ggcgcgctcc agccggcgga ttttttcgcg
     4681 caaatctgcc gcgagcggg
//
LOCUS       DASWGA010000684         6833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2220348, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000684 DASWGA010000000
VERSION     DASWGA010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6833
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2220348"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VF991_15915"
     CDS             <1..468
                     /locus_tag="VF991_15915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557981.1"
                     /translation="LPELLRASAADLCLSRMASPQAERPFSVASFDCVRFCCGRAGVA
                     PQAVVDHKALPPAPVLGYSNTLFFVSSVPSLEKLSAIPVSRFWGALHQPRDGGGSLAS
                     LRLDAGDPDVVGPLGALLAVLHGQRAACSPTLQPWQHPVVRRSTASASSISPA"
     gene            465..1616
                     /locus_tag="VF991_15920"
     CDS             465..1616
                     /locus_tag="VF991_15920"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9557982.1"
                     /translation="MIAGPLCTQMLSDMGAEVIKIENPDGGDDTRKGAGPRVGGAAGE
                     SHFFMTFNRGKKSVALDFTKPQGQAIVHKLLGSADVMVENFRPGVLKKYGLDYPSLHE
                     KCPKLIYLSISAYGQTGPLSDRPGYDPVLQAESGMMSVNGEAKGEGLRHAIAIVDTMT
                     AIHSAAAINAALYARRDTGRGQQIDLALYDTALAALGNMGSYYLIGGEQPKRAGNGHF
                     ASAPNSSFETKNGKIYMAVANQKLFTDTCKALGHPEWASDPRFAALADRVANKPELTQ
                     LMEDVLKTDTKENWAHKLRHLPAGPIRTMKEALDEPEVKRRGMLKTYQHTKIGEVPMI
                     GSNYHFSDTPVDDTRPPPALGEHTDQVLRDIAGLGAAEIAALRGKKIIG"
     gene            complement(1606..2331)
                     /locus_tag="VF991_15925"
     CDS             complement(1606..2331)
                     /locus_tag="VF991_15925"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9557983.1"
                     /translation="MAKTPLLLVPGMLCSPRLFAAQAKALAADADIVVPDWRRAPLAV
                     WDTWESAARWVVEQMPAEKFALAGLSLGGMLAVEIMQFAAQRVTKLALIDTGMRGQNE
                     AERAIRRARIRLADEGHFELVLGMQMARFVPAYRLPDKKLVDEVMTMCGEIGVEIYKR
                     QEELAAIRADRRPDLPKITCPTVVVCGRDDAATPLFLSEEMAAAIRGSELIVVEQCGH
                     LVTMEKPEETNAILKRWLSGASR"
     gene            2391..3548
                     /locus_tag="VF991_15930"
     CDS             2391..3548
                     /locus_tag="VF991_15930"
                     /inference="COORDINATES: protein motif:HMM:NF021633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OpgC domain-containing protein"
                     /protein_id="HEX9557984.1"
                     /translation="MTALPVIASGRDIRLDLFRGLALWFIFVDHIPTNIVSWLTVRNY
                     GFSDATEIFVFISGYTAVIAYARMMQRDGWLRAAARIYRRVWQLYVAHILLFVAFSAQ
                     VIWVSIARDMPALIEEMELMGLGQNPYRAILEAALLKFRPVNLDVLPLYIVLLAAFPF
                     VLPFVVRWPKAVIAASLVLYAATCHFDWNLPAYPENKVWYFNPMAWQVVFYVGAACAM
                     LGSELARLDRFRVPLAVLAMLYLLFAAVIALSWHYNPLERLIPAWIGRVIYPIDKTNI
                     DILRFLHFLAVAWLVRLAVPADAVFLRWRIVDPLRRCGEQSLLIFCIGTFLALSAQVI
                     VSHFEESLLSQIVVSVAGIGIMCAAAYVATWFKGGGSAGPGRMPATAEAVP"
     gene            3617..4285
                     /locus_tag="VF991_15935"
     CDS             3617..4285
                     /locus_tag="VF991_15935"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEX9557985.1"
                     /translation="MSLCRAKAELLELGSPLEIARKSIAERKQLRIIALGSSSTSGYG
                     VSNPVFAYPAQLKMGLDKALPGIDVDVINRGIGGQDVEEMASRMRAEMQDNPASLVVW
                     QTGTNAAIRHMPHDKFERLLRNGLTLGKSLGADFVLMNMQYVPAVVAAADKEVYEKIM
                     AAAAREYDAGLFRRFDIMRGWYDDGMPYSQFVQLDGLHLNDFGHKCIGKLLTKSILNS
                     LNGP"
     gene            4290..5066
                     /locus_tag="VF991_15940"
     CDS             4290..5066
                     /locus_tag="VF991_15940"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX9557986.1"
                     /translation="MPRRFVDLSIYLENDVISDPVPFGPKIQYHKHEDTAGQIAGFFP
                     GLKKEDLPDGQGWAVENVNLSTHNGTHLDAPYHFHPTMNKGERAITIDEVPLDWCFQP
                     GVKLDFRDKPDGHVITAHEVQDELLRIGHELKPLEIVVVNTRAGSRYGNNDYVNSGCG
                     MGYDATMFLLEKGIRLTGTDAWSWDAPFYFTAQKWAKDHDPSIIWEGHKAGRHIGYCH
                     LEKLHNLEALPGDGFTIACFPHKIRGASAGWTRAVAIFEE"
     gene            complement(5115..5663)
                     /locus_tag="VF991_15945"
     CDS             complement(5115..5663)
                     /locus_tag="VF991_15945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX9557987.1"
                     /translation="MPRLAPLDLDKLTPDQKKVADAIVAGPRGALRGPFEPWLRSPHL
                     ADRAQKLGEYCRFNSSLPKDLSELAICLVGRHFKAQYEFYAHARLAKEAGLAPAIVEA
                     VRTRATPPFTREAERIVYDFVSEYLETNRVAAANYKRAVDALGEQGVVDLVGVCGYYM
                     LVSMTLNVFEMPLPAGVLEPLA"
     gene            complement(5682..6290)
                     /locus_tag="VF991_15950"
     CDS             complement(5682..6290)
                     /locus_tag="VF991_15950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557988.1"
                     /translation="MYFATHIAAALLGLATFTLALPGLAQAPGVGQGPKLGELEIKAY
                     QKIPKTKAAVQLTSDNHLARELRRQVMIRLSQRGNEVGFSGGNVMRMDVSFFDLLGGN
                     DRSTGTIGGQPYYAPPGSNPRMDLPANPIGRRDGLTPSTAGPTLRITLTLYAVDTGKV
                     LWTASGSCSTQAGKAQQAGEAIINRMFDNADQNMVGDAGCPL"
     gene            complement(6310..>6833)
                     /locus_tag="VF991_15955"
     CDS             complement(6310..>6833)
                     /locus_tag="VF991_15955"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX9557989.1"
                     /translation="KYPVEASAFFIHGRLHAGNARATVVLHSHMPYATALTSIRDGRL
                     EMCTQNAFRYWNRIAYDEAYGGVALSAEEGDRMCRALGDKNILFLRNHGVIVAGPTVA
                     QAYDDLYYLERAAMVQVLAMQTGRPLDNIDATLAEHTANQIADGAQQALLHFESLKRM
                     LDRDEPGWRTLAA"
BASE COUNT         1127 a         2312 c         2170 g         1224 t
ORIGIN      
        1 ctgccggagc tcctcagagc cagcgcggcc gatctctgct tgtcgcgcat ggcatcgccg
       61 caggcagagc ggccattttc cgtggcgtcg tttgattgcg ttcgcttctg ttgtggccgt
      121 gccggcgtgg cgccgcaagc cgtggtggat cacaaagcct tacccccggc tccggtgctt
      181 ggttattcca ataccctctt cttcgtttct tccgttcctt ccctcgagaa actgtcggct
      241 attcctgtgt ctcgattttg gggtgcacta caccaaccgc gtgacggcgg tggatcgctt
      301 gcttcactgc ggctcgatgc gggcgatcct gacgtagtcg gcccacttgg cgcgctcctc
      361 gcggtcctgc atggacagcg cgcggcctgc agccctacct tgcagccatg gcaacatccg
      421 gtcgtccgcc gctcgacggc atccgcgtcg tcgatttctc ccgcgtgatc gcgggtcccc
      481 tgtgtaccca gatgctatcg gacatgggcg ccgaggtgat caagatcgag aatccggacg
      541 gcggcgacga cacgcgcaag ggtgccggtc cgcgggtcgg cggcgctgcg ggcgagagcc
      601 acttcttcat gaccttcaac cggggcaaga agagcgtggc gctcgacttc accaagcccc
      661 agggccaggc gatcgtccac aagctgctcg gatcggccga cgtcatggtc gagaatttcc
      721 ggcccggcgt gctgaagaag tacggcctcg actatcccag cctgcatgaa aaatgcccaa
      781 agctgatcta tctctcgatc tcggcttacg gccagacggg accgctgtcg gatcggccgg
      841 gctacgatcc ggtgctgcag gccgagtcgg gcatgatgag cgtcaacggc gaggccaagg
      901 gcgagggcct gcgccacgcc atcgccatcg tcgacaccat gacggcgatc cattcggcgg
      961 cggcgatcaa cgccgccctc tacgcgcggc gcgacaccgg ccgcggccag cagatcgatc
     1021 tggcgctcta cgacaccgcg ctggccgcgc tgggcaacat gggctcctac tatctgatcg
     1081 gcggcgagca gcccaagcgc gccggcaacg gccatttcgc ctccgcgccc aacagctcgt
     1141 tcgagaccaa gaacggcaag atctacatgg cggtggccaa ccagaagctg ttcaccgata
     1201 cctgcaaggc gctcggccat cccgaatggg cgagcgaccc acgcttcgcc gccttggccg
     1261 accgcgtcgc caacaagccc gaactgacgc agctgatgga agatgttttg aagaccgata
     1321 ccaaggagaa ttgggcccac aaattgcgcc acctgccggc cggcccgatc cgcaccatga
     1381 aggaggcact cgacgagccc gaggtcaagc gccgcggcat gctgaaaacc taccagcaca
     1441 ccaagatcgg cgaggtgccc atgatcggct cgaactacca cttttccgac acgccggtcg
     1501 acgacacgcg cccgccgccg gcgctgggcg aacacaccga tcaggtgctg cgtgatatcg
     1561 ccggactggg cgccgccgag atcgccgctt tgcggggaaa gaagatcatc ggctagctcc
     1621 ggaaagccag cgcttcagga tggcattggt ctcctcgggt ttctccatgg tgacgagatg
     1681 cccgcactgc tcgaccacga tcagctcgct gcccctgatg gccgccgcca tctcttccga
     1741 caggaacagc ggcgtcgccg catcgtcgcg gccgcacacc acgacggtgg ggcaggtgat
     1801 cttcggcagg tcgggccgcc ggtcggcgcg gatcgccgcc agctcctcct ggcgcttata
     1861 aatctcgacg ccgatctcgc cgcacatcgt catcacctcg tcgaccagct tcttgtcggg
     1921 caggcggtag gccgggacga agcgcgccat ctgcatgccc agcaccagct cgaagtggcc
     1981 ctcgtcggcc agccggatgc gggcgcggcg gatcgcgcgc tcggcctcgt tctggccccg
     2041 catcccggtg tcgatgagcg ccagcttggt cacacgctgt gcggcgaact gcatgatctc
     2101 gaccgccagc atgccgccca gcgacaggcc ggccagcgcg aacttctccg ccggcatctg
     2161 ctcgaccacc cagcgcgcgg cactttccca ggtgtcccag acggcaagcg gcgcgcggcg
     2221 ccagtcgggc acgacgatat cggcgtcggc cgcaagcgcc ttggcctggg ccgcgaacag
     2281 gcgcggcgag cacagcatgc cgggcaccag aagcaggggc gttttggcca ttcggttctc
     2341 ccgcgccgaa cgtagcctag gcgctgtgag tgcgatacca atggcggccc atgaccgcct
     2401 tgcccgtcat cgcttccggt cgcgatatcc gcctcgacct gttccgtggg ctggcgctgt
     2461 ggttcatctt cgtcgaccac atcccgacca acatcgtgag ctggctgacc gtgcgcaact
     2521 acggcttcag cgacgccacc gagatcttcg tcttcatctc gggctacacc gcggtgatcg
     2581 cctatgcccg catgatgcag cgcgacggct ggctgcgcgc cgccgcacgc atctaccgcc
     2641 gcgtctggca actctatgtc gcgcacatcc tgctgttcgt ggccttctcc gcccaggtca
     2701 tctgggtgtc gatcgcgcgc gacatgccgg cgctgatcga ggagatggaa ttgatggggc
     2761 tcgggcagaa cccctaccgg gccatcctcg aggcggcgct gctgaaattc cggccggtca
     2821 atctcgacgt cctgccgctc tatatcgtcc tgctggcagc cttccccttc gtcctgccgt
     2881 tcgtggtccg ctggccgaaa gcggtgattg ccgcgtcgct cgtcctttat gcggcaacat
     2941 gccacttcga ttggaacctg cccgcctacc cggaaaacaa ggtctggtac ttcaatccca
     3001 tggcctggca ggtcgtgttc tacgtcggcg ccgcctgcgc catgctcggc tccgaactcg
     3061 cccggctcga ccgcttccgg gtccctttgg ccgtcctggc catgctctat ctcctgttcg
     3121 cagccgttat cgccttgtcc tggcattaca atccgctgga acggctgatc ccggcctgga
     3181 tcggccgggt gatctacccg atcgacaaga caaacatcga catcctgcgg ttcctgcatt
     3241 tcctggcggt ggcctggctg gtccggctgg ccgtcccggc cgatgccgtt ttcctcaggt
     3301 ggcggatcgt cgacccactt cgcagatgcg gggagcaatc gttgcttata ttctgtatcg
     3361 gtacttttct tgcgttgtcg gcccaggtga tcgtcagtca tttcgaggag tcgctcctgt
     3421 cgcagatcgt cgtgagcgtc gcaggcatcg gcatcatgtg cgcggccgcc tatgtggcga
     3481 cctggttcaa agggggagga tcggccggcc cgggtcgcat gccggcgacg gcagaggccg
     3541 tgccatgagc cgtgcctggc attggttgac cgccgttctt gtcgtgttgc ttccaaccgt
     3601 agcgtcgccg caatccatgt cgctttgccg ggccaaggct gaactgctcg aactgggctc
     3661 gccgctcgag atcgcgcgca agtcgatcgc cgagcgcaag cagcttcgca tcatcgcgct
     3721 cggctcgtcg tcgacctcgg gctacggcgt gtccaacccg gtcttcgcct atccggccca
     3781 gctcaagatg gggctcgaca aggcgctgcc cggcatcgat gtcgatgtga tcaatcgcgg
     3841 catcggcggc caggacgtcg aggagatggc ctcgcgcatg cgcgctgaga tgcaggacaa
     3901 cccggcctcc ctggtggtct ggcagaccgg caccaacgcc gccatccgcc acatgccgca
     3961 cgacaagttc gagcgcttgc tgcgcaacgg gctgacgctc ggcaagtcac tgggcgcgga
     4021 tttcgtgctg atgaacatgc agtatgtgcc ggccgtggtc gccgcggccg acaaggaggt
     4081 gtacgagaag atcatggccg ccgctgcccg ggagtatgac gcgggcctgt tccgccgctt
     4141 cgacattatg cgcggctggt acgacgacgg catgccctac tcgcagttcg tccagctcga
     4201 cggcctgcat ctcaacgact tcggccacaa gtgcatcggc aagcttttaa ccaagtcgat
     4261 cctgaattcg ctgaacggcc cgtgagatca tgccgcgccg gttcgtcgac ctttcgatct
     4321 atctcgaaaa cgacgtgatc tccgatcccg tgccgttcgg cccgaagatc cagtatcaca
     4381 agcacgaaga caccgccggc cagatcgccg gcttcttccc cgggctcaag aaggaagacc
     4441 tgcccgacgg ccagggctgg gcggtcgaga acgtcaatct ctcgacccat aacggcaccc
     4501 atctcgacgc gccctatcat ttccatccga cgatgaacaa gggcgagcgc gccatcacca
     4561 tcgacgaggt gccgctcgac tggtgcttcc agcccggcgt caagctcgac ttccgcgaca
     4621 agcccgacgg ccatgtcatc accgcccacg aggtccagga cgagctttta cgcatcggcc
     4681 acgagctcaa gcccctggag atcgtcgtcg tcaacacgcg cgcggggtcg cgctacggca
     4741 acaacgacta cgtgaactcg ggctgcggca tgggctacga cgccaccatg ttcctgctgg
     4801 agaagggcat tcgcctcacc ggcaccgacg cctggagctg ggacgcgccg ttctacttca
     4861 ccgcccagaa atgggccaag gatcacgatc cctcgatcat ctgggaaggc cacaaggccg
     4921 gccgccacat cggctactgc cacctcgaga agctgcacaa tctcgaggcc ctgccgggcg
     4981 acggcttcac catcgcctgc ttcccgcaca agatccgcgg cgcctcggcc ggctggaccc
     5041 gcgcggtggc gatcttcgag gaataagctg ggggcgcgcc actccagtgg cgcgatgcac
     5101 taagccagcg gcccctaagc gaggggttct agcacgccgg ccggcagcgg catctcgaag
     5161 acgttcagcg tcatcgacac cagcatgtag tagccgcaca cgcccaccag atcgaccacg
     5221 ccctgctcgc ccaaggcatc gacggcgcgc ttgtagttgg cggcggcaac gcggttggtc
     5281 tcgagatatt cgctgacgaa atcgtagacg atgcgctcgg cctcgcgggt gaagggtggc
     5341 gtggcgcgcg tgcgcacggc ctcgacgatg gccggcgcca gccccgcctc cttggccagc
     5401 cgggcatggg cgtagaactc gtactgcgcc ttgaagtgcc ggccgaccag gcagatcgcc
     5461 agctccgaca ggtccttggg cagcgagctg ttgaagcggc agtattcgcc gagcttctgc
     5521 gcgcggtcgg ccaggtgcgg gctgcgcagc cacggctcga agggcccgcg cagggcgccg
     5581 cgcggccccg cgacgatcgc gtcggccacc ttcttctggt cgggagtgag cttgtcgagg
     5641 tcgagcgggg ccagacgcgg catgaaacga tgtcctccga tttaaagcgg gcagccggca
     5701 tcgccgacca tgttttggtc ggcgttgtcg aacatgcggt tgatgatcgc ctcgccggct
     5761 tgctgggcct taccggcctg cgtcgaacac gagccgctcg ccgtccacag gaccttgccg
     5821 gtgtcgacgg catagagggt gagcgtgatg cgcagcgtcg ggccggcggt cgagggcgtc
     5881 agcccgtcgc gccggccgat cgggttggcc ggcaggtcca tgcgcgggtt ggaaccggga
     5941 ggggcatagt agggctggcc gccgatcgtc ccggtgctgc ggtcgttgcc gcccagcagg
     6001 tcgaaaaagc tcacgtccat gcgcatcacg ttgccgccgc tgaaacccac ctcgttgccg
     6061 cgttgcgaca gacggatcat cacctggcgc cgcagctcgc gtgccagatg gttgtcggag
     6121 gtgagctgca cggccgcctt ggtcttggga atcttctggt aggccttgat ctcgagctcg
     6181 ccgagcttgg ggccttggcc cacgccgggg gcttgcgcca ggccgggcag cgccagggtg
     6241 aaagtcgcca agcccaaaag tgcggccgcg atgtgcgtcg cgaaatacat tgtgaccccc
     6301 gtcttccgcc taggccgcca gcgtgcgcca gcccggctcg tcgcgatcca gcatacgctt
     6361 cagcgattcg aaatgcagga gagcctgctg tgccccgtcg gcgatctggt tggcggtgtg
     6421 ctcggccagc gtggcgtcga tattatccaa tggccggccg gtctgcatgg ccagcacctg
     6481 caccatcgcc gcgcgctcga gatagtagag gtcgtcgtag gcctgggcga cggtgggtcc
     6541 cgcgacgatg acgccgtggt tgcgcaggaa caggatgttc ttgtcgccga gcgcgcggca
     6601 catgcggtcg ccctcctcgg ccgacagcgc cacgccgcca taggcctcgt cgtaggcaat
     6661 gcggttccag tagcgaaagg cgttctgggt gcacatttcc agccggccgt cgcggatcga
     6721 ggtcagcgcc gtggcgtagg gcatgtggct gtgcagcacc accgtggcgc gcgcattgcc
     6781 ggcatggaga cggccgtgga tgaaaaaggc gctcgcctcg acgggatact tgc
//
LOCUS       DASWGA010000685        10425 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_451670, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000685 DASWGA010000000
VERSION     DASWGA010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10425
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451670"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            303..1496
                     /locus_tag="VF991_15960"
     CDS             303..1496
                     /locus_tag="VF991_15960"
                     /inference="COORDINATES: protein motif:HMM:NF037955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9557990.1"
                     /translation="MARWITGIRLSGYGAAYFFAAGAFMSFWPVWLRDRGVDDSQIGT
                     LFMSRQLVSVAATLLIGWVAHRVGNVRGVILALAAAATLLMTGYQFTYSFAAILAVTL
                     VWGGVWAPTMALYDGVLVTETKARGFNYGSLRVWSSVAFILGTLICGAAVDRNGPSWV
                     LYVGFAGIAMLVPLGLLLPPAETHHRDRSRHAPFGIVDLLASRPFLLFMLAAGCCQAS
                     HAVLYSFGTLTWRAAGIDDVTISLLWGESVAVEIVLMLGSGWLLSRLGACGMIGLALA
                     CGLVRWLGMAFTTELWALVLLQALHAGTFAACHLGAMAFIQRALPASGVALGQSVYYA
                     LGTGATQAVIFQVAGLLYADFGQRAFLGMFVVSAVGMAAIVLLARIWKGNLLVGARHD
                     TAPAP"
     gene            complement(1472..2662)
                     /locus_tag="VF991_15965"
     CDS             complement(1472..2662)
                     /locus_tag="VF991_15965"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX9557991.1"
                     /translation="MEMADSYDAVVIGGGVIGTATLFNLARLGCRRALLLERGELAQG
                     ATAKSSGIVRTHYSVAPNVAIARASLRMFEEFSSLLDDPEADAGLVRSGYLIVAPPGD
                     ASSAVRRSIAMQQKMGVECGLLDRVEALARHPWLKLDGIDAIGFEAEAGFADPYLVTT
                     GFARAARRLGAEIRTATPVTGLLRDRDRVVGVQTAAGPIHAGVVLSAVNVWSRTVAGW
                     AGLDIPFGISAHHVVTLAADRPYTNDLPVLKDLASSARLYTRPYGGNLLVSAGHEGTE
                     VDDPDASEVEADMEALVGEVAQIADRMPAFAEGRLVRSWSGLYDTTPDWNPVLGPVPG
                     IPGLQVAFGFSGHGFKLAPMVGRMLAQSMLGQKPDLPLHPYRFTRFAEGEPLVGAYGA
                     GAVS"
     gene            complement(2690..3622)
                     /locus_tag="VF991_15970"
     CDS             complement(2690..3622)
                     /locus_tag="VF991_15970"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9557992.1"
                     /translation="MSGPGIPNYLDYPWRRRGLDHDRFQHRNLPQAKAAVWPGKARVA
                     LWVTVHVGHFPMDMPRLPFVAPGGVDRPYPSYWDYTQRDYGNRVGIYRLMRALDQRGL
                     RATALLNAAVATRYPALAAEIGASQWEVAAAGVDMSHLHHGGLPEADERALVKQAVEA
                     LRGAFASKIRGWHSPAHSESMRTLDLVAAAGLDYVTDWINDDMPYPVTTSAGQLTSMP
                     LAWDLSDQRLLFQQHMDTAEFVEQVLRAFTTLYAEAARTGSGRILTLAITPWLMGQPH
                     RIRALGAMLDRILEHAGVWPATGAEIVDAWNASA"
     gene            complement(3619..4539)
                     /locus_tag="VF991_15975"
     CDS             complement(3619..4539)
                     /locus_tag="VF991_15975"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9557993.1"
                     /translation="MLAEPGHYDYAPYTGRPRIVWPGGARIAVWLAPNIEHYELEPPD
                     NPRKTPWPRPVPDVLNYSHRDYGNRAGFWRMADVMARHGVRGSVSLNVAVCDHFPEII
                     ERCCELGWELFSHGTYNTRYFYDLSEDQQRTVIADSRETILKYSGQSLDGWLTPAITN
                     DETTQHVLAEEGIKYTLDMVHDDQPMPVKVRNGRLISVPYSLEVNDVPLFQMRNTPVE
                     RYTAMVKAQFDQLYAEGAESGTVMCLPLHPYLTGQPQRISALDEALAHIVAHDGVWLA
                     TGREIAAWYTEHYYDVFSKWLAAGTPGGRR"
     gene            complement(4595..5464)
                     /locus_tag="VF991_15980"
     CDS             complement(4595..5464)
                     /locus_tag="VF991_15980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HEX9557994.1"
                     /translation="MRKVWIEVALNGAWSRRLQPGIPDTVEQIVAEGIACARAGASIV
                     HTHAYAEDGKQTFDWQVYARIIEGIRAEVDVPVYPSYPTIPGNSIEGDVAARFAHVEA
                     LADRGLLDFAVIDPGSVNLTLARTKAGAKPAGTYLNPEAHVRHALDFAARKGLHPAFA
                     IYEPGFTRAGAALARAAGVKPPVYRFMFSETFAFGFPPKPYALAAHLALLEDVAGSSP
                     WMIAGLAADVRPLIGETVARGGHVRVGLEDAPLGTALSNLAWVEEAVRLVRENGAEPA
                     SGTDVRQALAALA"
     gene            5604..6929
                     /locus_tag="VF991_15985"
     CDS             5604..6929
                     /locus_tag="VF991_15985"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9557995.1"
                     /translation="MPKRIHIRGAQIVTMDEALGDFASADILIEDGAIRAVGPSLDSA
                     DAERIDGADMIALPGIIDAHTCLWQTVLRGHVPDLWPGAYYSKFLPLRSRFTAEDNFN
                     AAYVGGFEMLSYGTTTVVDYCHNIRGPDYAPASIGALKETGIRHLFTYSFMPVPPHRF
                     PRADDRFTDARLVYDKFHDPAGLTTIGFGIDSIGALGLENGLEKQLAFSRALNAPSCI
                     HVNETGTIDRLKANGLLGPDLLVIHGNLITNGELELMAKAGMPLCFTPTADTQGAPAD
                     VVRRAIDRGVEVVFGCDIPCSVASDPIGQLRVMFNVQGFLDGVMERSFSTVVGRRPPV
                     RPGLPLLTPRRLFEIATIGTARVLGLDDRIGSLTPGKRADIVLIRKGAFGDSVANDAC
                     AHVLLQTSPRDIDTVLVDGEARMRAGVLLGFDPERAAAMIRSSRQRILN"
     gene            6926..7606
                     /locus_tag="VF991_15990"
     CDS             6926..7606
                     /locus_tag="VF991_15990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557996.1"
                     /translation="MSPATGMARNRRKSASREKSSARPARPRKRRQPTAPAPPALPFD
                     QELLQLARSAAGTLQRAFLAVLVLAAIGGIAAGLWMLRPIPTFSSADVAAGSPFDATF
                     QVENRNSWLGLANLKISCVLAQVRASPISPTMVDPTMVDATNVRFAGKQANGLEPGES
                     GTFTCPFQVALTPTKDDPGIAQRAEIYFRSEYDLPLIGSLRLTDNSARFSLNTRLLPP
                     RWTSKPNG"
     gene            complement(7613..7912)
                     /locus_tag="VF991_15995"
     CDS             complement(7613..7912)
                     /locus_tag="VF991_15995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9557997.1"
                     /translation="MTTIDAFRSSVSAEMPPSDVGPALQALWWARRGDWKRAHECVQQ
                     HEGERDCDWVHAHLHRQEGDMRNAGGWYRRAGQPVPTLSLEEEWNILATDMLSRK"
     gene            8642..10327
                     /gene="ggt"
                     /locus_tag="VF991_16000"
     CDS             8642..10327
                     /gene="ggt"
                     /locus_tag="VF991_16000"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9557998.1"
                     /translation="MVKSDWRERAGTAFACEKQPAHGTRGMVVTNHPLASAAGMEMLA
                     AGGNAIDAAVASQFALTVVEPMMVGLIGGTTMHVRLADGRHTIIDGMSAVPRAGHPTM
                     YRPVPQAPPEVYDVEGRENLVGPKSVATPGSLRAWCLALRQYGTLSLADAMQPAIRYA
                     SRGFVVTPYLADCIVGASPDLLQDPFIADRLLPDGRALEAGERLVQGDYAEALTLISQ
                     QGEKALHGGPLGDLVVECMERSGGFVGLEDLTGYRVVERAPIRGQYRGWEIVGPPPPA
                     ASGVHIAQMLNILEGYEVARLGFGTVDGIHLLAEVLKIAFADRAEASGDPDFVHVPVE
                     RITSKAYAKERRAGIELARARRWTGALRELEGADTTHLTVADGSGNVVSTTQTINSLF
                     GACFIIPGTGMVPNNYMSNFDPRPGNALSIAPGKRVTTSMSPMMALREGRVVYALGLP
                     GGRKIFPAALQALLNLIDHGMTLQEAVEAPRVWTEGPVLELEHGVPAGVREGLQARGH
                     KLQVVPTVAGGMNAIQFHDDGSMSGAACWRADGVALALGGGLARAGVRFVLPR"
BASE COUNT         1646 a         3565 c         3463 g         1751 t
ORIGIN      
        1 ctcggtcggc gatctgtcga gccacccgca gctccgtcgc gtcggcttcg gcaccgaaaa
       61 aggcgaggtc gccatgcccg ccctcgccgc ctcctggcag ggcgagcccg agcggctggg
      121 cgaggtgccg tcggtgggac agcacacggc tgaggtgcgg cgcgagttcg gcgcctagcg
      181 atgaccgtca tcccgaccgg agccgagcgc agcgaggcgg agtggaggga cctattcatg
      241 tccaacgaag aagaggtccc tccactccgc ttcgctccgg tcgggatgac ggtcatggtc
      301 taatggcgcg ctggatcacc gggatccggc tttcgggata cggcgcggcc tacttcttcg
      361 ccgccggcgc cttcatgagc ttctggccgg tgtggctgcg cgaccgcggc gtcgacgatt
      421 cgcaaatcgg caccctgttc atgagccgcc agctcgtgag cgtggcggcg acgctcctga
      481 tcggctgggt cgcgcaccgc gtcggcaatg tgcgtggcgt catcctcgcc ctggcggcgg
      541 cggctaccct cctgatgacg ggctaccagt tcacctacag ctttgccgcc atcctggcgg
      601 tgaccctggt gtggggcggc gtgtgggcgc cgaccatggc gctctatgac ggcgtgctgg
      661 tgaccgagac caaggcacgc ggcttcaact acggcagcct gcgcgtctgg agctccgtcg
      721 ccttcatcct gggcaccttg atctgcggcg cggccgtcga tcgcaacggc ccctcgtggg
      781 tactctatgt cggcttcgcc ggcatcgcca tgctggtgcc gctcggcctg ctgttgccgc
      841 ccgccgagac gcatcaccgt gacaggtcga gacacgctcc gttcggcatc gtcgacctgc
      901 tggcctcgcg gccgttcctg ctgttcatgc tcgcggccgg ctgctgccag gcgagccacg
      961 ccgtgctcta cagcttcggc acgctgacct ggcgcgccgc cgggatcgac gacgtcacca
     1021 tcagcctgct gtggggcgaa agcgtcgccg tcgagatcgt gctgatgctg ggcagcggct
     1081 ggcttttatc gcggctcggt gcgtgcggca tgatcggtct tgcgctcgcc tgcgggctgg
     1141 tgcgctggct gggcatggcc tttacgacgg agctgtgggc acttgtcctc ctgcaagcgc
     1201 tgcatgccgg cacctttgcc gcgtgccacc tgggcgccat ggccttcatc cagcgcgcct
     1261 tgccggcgtc gggtgtggcg ctgggccaga gcgtctacta cgcgctgggc acgggggcga
     1321 cgcaggcggt gatcttccag gttgccggcc tcctctacgc cgacttcggt cagcgcgcgt
     1381 tcctcggcat gttcgtggtc agcgctgtcg gcatggcggc gatcgtgctc ctcgcccgaa
     1441 tttggaaagg caacttgctg gtcggcgccc gtcatgacac ggcgccggcg ccataggcac
     1501 cgaccagcgg ctcgccttcg gcgaagcggg tgaagcgata ggggtgcagc ggcagatcgg
     1561 gcttctggcc cagcatcgac tgcgccagca tgcgaccgac catcggcgcc agtttgaagc
     1621 cgtggccgct gaatccgaag gcgacctgca ggccggggat gccaggtacc ggccccagca
     1681 ccggattcca atcgggtgtg gtgtcgtaaa ggcccgacca cgatcgtacg aggcgcccct
     1741 cggcgaatgc cggcatgcgg tccgcgatct gcgccacctc accgaccaga gcctccatgt
     1801 cggcctcgac ctcggacgca tcggggtcgt ccacttccgt cccctcatgt ccggcgctca
     1861 ccaacagatt gccgccgtag ggtcgcgtgt agagccgggc ggacgaggcg aggtccttga
     1921 gcaccggcaa atcattggtg tagggccggt cggcggcaag cgtgacgaca tggtgggcgc
     1981 tgatgccgaa tggaatatcc agcccggccc agccggcgac ggtccggctc cagacgttca
     2041 ccgccgacag aaccacgccg gcgtggatcg ggccggcggc ggtctgcacg ccaacgacac
     2101 ggtcgcgatc gcgcagcaaa cccgtgacgg gcgttgcggt ccgtatctcg gcgccaagcc
     2161 ggcgcgccgc gcgggcaaag ccagtcgtga ccagataagg atccgcgaag ccggcctcgg
     2221 cctcgaagcc gatcgcgtcg atgccatcga gcttcaacca agggtgacgc gccagcgctt
     2281 cgacacggtc gagtagaccg cactcgacgc ccatcttttg ctgcatcgcg atactgcgcc
     2341 gcacagcgga tgacgcgtcg cccggcggcg ccacaatgag gtagcccgac cgtaccaggc
     2401 cggcatcggc ctccgggtcg tcgagcaggc tcgagaattc ctcgaacatg cgcaggcttg
     2461 cgcgggcgat cgccacgttc ggcgccacgg agtaatgcgt gcggacgatg cccgaggatt
     2521 tggcggtcgc gccctgggcc agctcgccgc gctcgagcag cagcgcgcgc cggcagccga
     2581 gccgcgccag gttgaacaag gtcgccgtgc cgatcacgcc gccgccgatc accaccgcat
     2641 cgtagctgtc cgccatctcc atcaaacccc ttcgacggtc agggcgtttt caggcgctcg
     2701 cgttccaggc gtcgacgatc tccgcgccgg tggccggcca gacaccggcg tgctcgagga
     2761 tgcggtcgag catcgcgccc agcgcccgga tgcgatgcgg ctggcccatc aaccaggggg
     2821 tgatggcgag cgtcaggatg cggccgctgc ctgtcctggc cgcctcggca tagagcgtcg
     2881 tgaaggcgcg cagcacttgc tcgacgaact cggccgtatc catgtgctgc tggaagagca
     2941 gccgctggtc gctgaggtcc caggcgagcg gcatggacgt cagctggccg gccgacgtgg
     3001 tcaccggata gggcatgtcg tcgttgatcc agtcggtgac gtagtcgagt cccgccgccg
     3061 ccacgagatc gagggtgcgc atcgattcgg aatgggcggg cgaatgccag ccgcggatct
     3121 tcgaggcgaa ggcaccgcgc agcgcctcga cggcttgctt caccagcgcc cgttcatcgg
     3181 cttccggcaa gccgccgtgg tgcagatggc tcatgtcgac gccggctgcc gcaacctccc
     3241 actggctggc gccgatctcg gcggcgagcg cgggatagcg cgtcgcgacc gccgcgttca
     3301 gcagcgccgt cgcgcgcagc ccccgctgat cgagcgcccg catcaggcga tagatgccga
     3361 cccggttgcc gtagtcgcgc tgggtgtagt cccagtagct gggatagggc cggtcgacgc
     3421 cgcccggcgc cacgaacggc agccggggca tgtccatcgg gaaatgcccg acatggacgg
     3481 tgacccacag cgccacccgc gccttgcccg gccagaccgc cgccttggcc tgcggcaggt
     3541 tgcgatgctg gaagcggtcg tggtcgaggc cgcgccggcg ccagggatag tcgaggtagt
     3601 tcgggattcc ggggccgctc atcgccggcc tcccggcgtg cccgccgcca gccatttcga
     3661 gaagacgtcg tagtaatgct cggtgtacca ggcggcgatc tcgcgtcccg tcgccagcca
     3721 gacgccgtcg tgcgccacga tatgggccag tgcctcgtcg agtgctgaga tgcgctgcgg
     3781 ctggccggtg agatagggat gaagcggcag gcacatcacc gtgccgctct ccgctccctc
     3841 ggcatagagc tggtcgaact gggccttcac catggccgtg tagcgctcga ccggcgtgtt
     3901 gcgcatctgg aacagcggca cgtcgttgac ctcgagcgaa tagggcacgc tgatcagccg
     3961 gccgttgcgc accttgaccg gcatcggctg gtcgtcgtgc accatgtcga gcgtgtactt
     4021 gatgccctcc tcggccagca catgctgggt cgtttcgtca ttggtgatgg ccggcgtcag
     4081 ccagccatcg agcgactggc cgctgtattt caggatggtt tctcgactgt cggcgatcac
     4141 ggtgcgctgc tggtcttccg acaggtcgta gaaatagcgc gtgttgtagg tgccgtggct
     4201 gaacagctcc cagccgagct cgcagcagcg ctcgatgatc tcggggaaat gatcgcagac
     4261 cgcgacgttc agcgacacgc tgccgcgcac gccgtgcctg gccatgacat cggccatgcg
     4321 ccagaagccc gcccggttgc catagtcgcg atgggagtag ttgagcacat ccggcaccgg
     4381 ccgtggccac ggggtcttgc gcggattgtc gggcggttcg agctcgtagt gctcgatgtt
     4441 gggcgccagc cacacggcga tacgcgcccc gcccggccag acgatgcgcg gacgcccggt
     4501 atagggcgcg tagtcgtaat gaccgggttc ggccagcatc ccgttccccc tcggatgtcg
     4561 cttcgtggtg gctcagccta gctgaacgca atcttcacgc cagcgcggcg agcgcctgcc
     4621 gcacatcggt tccgctcgcc ggctcggcac cgttctcgcg cacgagtcgc acggcctcct
     4681 cgacccaagc gagattgctc aaggccgtgc ccaaaggtgc atcctcgagg ccgacgcgca
     4741 cgtggccgcc gcgcgccacg gtctcgccga tcagcggccg gacatcggcg gccaagccgg
     4801 cgatcatcca gggcgacgaa ccggccacgt cctccagcaa cgcgagatgg gccgcgagag
     4861 cgtacggctt gggcgggaag ccgaaggcga atgtctcgga gaacatgaag cgatagaccg
     4921 gcggcttgac gccggcggca cgggcgagcg cggcgccggc tcgcgtgaag ccgggctcat
     4981 agatggcgaa agccgggtga agacccttgc gggccgcaaa gtcgagggcg tgccttacat
     5041 gtgcttccgg gttgagataa gtgccggccg gcttcgcgcc ggccttcgtc ctcgccaggg
     5101 tgagattgac gctgccggga tcgatcacgg caaagtcgag caggccgcgg tcggcgagcg
     5161 cttcgacatg ggcgaagcgc gcggcgacat ctccctcgat gctgttccct gggatcgtcg
     5221 gataggaagg atagaccggg acatccacct cggcgcggat gccctcgatg atgcgggcgt
     5281 agacctgcca gtcgaaggtt tgtttgccgt cctcggcgta ggcatgcgtg tgaacgatgg
     5341 aggcgccggc gcgcgcgcag gcgataccct cggcaacgat ctgctcgacc gtatcgggaa
     5401 tgccaggttg aagcctgcga ctccaggcac cgttcagcgc gacctcgatc cagaccttgc
     5461 gcatcgctcc ctctcccatt ctttgcacca tagcctccgg ccggcgcatt gactaagact
     5521 cccgaacctc acctcgtcct gaggagccgc gccctgcggg cctcctcagg gtaaggttgt
     5581 ctgcgatcga gcgagtacca gcgatgccga agcgaattca tattcgaggt gcccaaatcg
     5641 tcacgatgga cgaggccctg ggcgacttcg cctcggccga catcctgatc gaggacggcg
     5701 ccatccgcgc cgtcgggcca tcgctcgact cagccgatgc cgaacggatc gacggcgccg
     5761 acatgatcgc gctgccgggc atcatcgatg cccacacctg cctgtggcag acggtcctgc
     5821 gcggccatgt gcccgacctt tggccgggcg cctactactc gaagttcctg ccgttgcgca
     5881 gccgcttcac ggccgaagac aatttcaatg cagcctatgt cggtggcttc gaaatgctgt
     5941 cctacggcac gacaaccgtc gtcgactact gccacaacat acgcgggccc gactacgcgc
     6001 cggcctcgat cggggcgctg aaggagaccg gcatccgcca cctctttacc tattccttca
     6061 tgcccgtccc gccgcatcgg tttccgcggg ccgacgatcg cttcaccgac gcccggctgg
     6121 tctacgacaa gttccacgat cctgcgggtc tcaccaccat cgggttcggc atcgattcca
     6181 tcggtgcgct ggggctcgag aatgggctcg aaaagcagct cgcgttttcg cgcgccctga
     6241 acgcgccgag ctgcattcac gtgaacgaga ccggcaccat cgaccggctg aaggccaacg
     6301 gcctgctcgg accggacctt ctggtgatcc acggcaacct gatcaccaat ggcgagctcg
     6361 agctgatggc aaaggctggc atgccgctct gtttcacccc gaccgccgac acgcagggcg
     6421 cgcctgccga tgtggttcgc cgcgccatcg atcgcggcgt cgaggtggtg ttcggctgcg
     6481 acatcccctg ttccgtcgca tccgacccga tcggacaatt gcgcgtcatg ttcaacgtcc
     6541 agggttttct cgacggggtg atggagcgga gcttctcgac ggtcgtcgga cggcggccgc
     6601 cggtccggcc cggattgccc ttgctgacgc cgcgccggct gttcgagatt gcgaccatcg
     6661 ggacggcgcg cgtgctgggc cttgacgacc ggatcggctc cctgacaccg ggcaagcgcg
     6721 ccgacatcgt gctgatcagg aaaggcgctt tcggcgattc cgtcgccaac gacgcctgcg
     6781 cccatgtcct cctccagacg agccctcgcg atatcgacac agtgctcgtc gatggcgaag
     6841 cccgcatgcg ggcaggcgtg ctactcggat tcgacccaga aagagcagcg gcgatgatcc
     6901 gttcgtcgcg gcagcgcatc ctgaattgag cccggcgacc ggcatggcaa ggaacaggag
     6961 aaagtccgcg tcgagggaaa agagctcggc acgcccggca aggccgagaa agcgacgcca
     7021 gcccacggcc cccgcgccgc cggccctgcc cttcgatcag gagctgctgc agctcgctcg
     7081 aagcgccgct gggacgctgc aacgggcatt cctcgccgtg ctggttctcg ccgcaatcgg
     7141 cggtatcgcg gccggcctct ggatgctgag gccgatcccg accttctcct ccgcggatgt
     7201 ggcggcgggt tcgccgttcg acgctacctt ccaggtggag aacaggaatt catggcttgg
     7261 cctcgccaac ctgaagataa gctgcgtgct tgcgcaggtc cgcgcctcgc cgatctctcc
     7321 gacgatggtc gaccccacca tggtcgacgc gaccaacgtg cggttcgcgg gcaagcaggc
     7381 caatgggctg gaacccggtg agtccggcac tttcacatgt ccgtttcagg tcgccctgac
     7441 accgaccaag gacgatccgg gcattgccca gcgtgccgag atctactttc gcagcgaata
     7501 cgatttgccg ctgatcggct cactgcggct gaccgacaac agcgcgcggt tctcgctcaa
     7561 tacccgcctt ctcccgccgc gctggaccag caagccgaac ggataggctc gcctactttc
     7621 gtgaaagcat atccgtcgcg aggatgttcc actcctcttc cagcgaaagc gtgggcacag
     7681 gctggccggc gcgccggtac catccgccgg cgttcctcat gtcgccttcc tgccgatgca
     7741 ggtgcgcatg cacccaatcg cagtcgcgct ctccttcgtg ctgctggacg cattcatgcg
     7801 cccgcttcca atcgccgcga cgtgcccacc acagcgcttg caaggcgggc ccgacatcgg
     7861 acggcggcat ctcagccgac acgctgctcc ggaatgcatc gatcgtggtc atgatcgcgt
     7921 gaactcctgg tcattgattg atcgaactat cacgacccga ccagaccaca tcaagtgtag
     7981 aaattctctt gcgttgcccg acgggcgacg ccagcgacgc cgctcattct cgcaccagga
     8041 cggccgttcg tttcagccat tgcgccggat cggcgcggtg gtagggatgc tccgacggct
     8101 cgatattgtc gaggaacttg cgatagatga ccgcctgccg cgcggcggcg acgggagcaa
     8161 gcagaaccga agcgcgagcg gggtccgaac cgggaacgac gtcgctccac agttgcagcc
     8221 agcacgcccg cccatcgcct cgccggcacg ggcttcgcga cctcggcgag atacgtcacc
     8281 cggccgccgt gcggccggcc gagctccgca ccgagcagcc gaaggatgac gacgtcgata
     8341 ccgtgatgtt tccgggccgc cgttacgacc ggttcaacgt cctgccacca gggcgtcggc
     8401 accggcacgg ccgacaggcc gccgatgcat tcaccgtcct gcgttaccaa caccagctct
     8461 gcagtgcgtg gcttcacaat caccagcggc cttccgagat tcactttgaa gagttacacc
     8521 ggcggcagcc gaatgtctgc cgccgacctc gctcgcgatt ggcgaccgct caaccacctg
     8581 atggcgctcc gcatcggagc gtgcgagatt tcggcgctgc gcagccaagg gggagtaggg
     8641 catggtcaag tcggattggc gggagcgtgc cggcacggcg ttcgcctgcg agaagcagcc
     8701 ggcccatggc acgcgcggca tggtggttac gaaccatccg ctggcctcgg ccgcgggcat
     8761 ggagatgctg gccgccggcg gcaacgccat cgacgccgcc gtcgccagcc aattcgcgct
     8821 gaccgtggtc gagccgatga tggtcggcct gatcggcggc acgacgatgc atgtccgtct
     8881 ggccgacggc cgccacacca tcatcgacgg catgagcgcg gttcctcgcg ccggccatcc
     8941 cacgatgtat cgtccggtcc cgcaggcccc gcccgaggtc tacgacgtcg agggccggga
     9001 gaacctggtc ggcccgaaat cggtggctac tcccgggtcg ctacgcgcct ggtgcctcgc
     9061 cctgcgccag tacggcaccc tgtcgctggc cgacgccatg cagcccgcga tccggtacgc
     9121 cagccgcggc tttgtcgtca cgccctacct tgccgactgc atcgtcggtg cgtcgcccga
     9181 cctcctgcag gaccctttca tcgccgaccg actcctgccc gacggccgcg ccctcgaggc
     9241 cggcgagcgc ctggtccagg gcgactacgc cgaggcgctg accttgattt cccagcaggg
     9301 cgaaaaggcg ctgcacggcg ggccgctggg cgaccttgtc gtcgagtgca tggagaggtc
     9361 cggcgggttc gtcggtctag aggacctcac cggctatcgc gttgtcgagc gcgcgccgat
     9421 ccgtggccag tatcgcggct gggagattgt cggtccgccg ccgcctgccg cgtcgggcgt
     9481 gcacattgcg cagatgctga acatcctcga aggctacgag gtcgcgaggc tgggcttcgg
     9541 cacggtggac ggcatccacc tgctggccga ggtcttgaag atcgccttcg ccgaccgcgc
     9601 cgaggccagc ggcgatcccg atttcgtgca cgtgccggtc gaacgcataa cctccaaggc
     9661 ctatgccaag gaacgccgcg ccggcatcga gctcgcccgt gccaggcgat ggaccggcgc
     9721 cctgcgggag ctggaagggg cggacaccac gcatctcacc gtcgccgacg gctcgggcaa
     9781 cgtcgtcagc accacccaga ccatcaacag cctgttcggc gcgtgcttca tcattccggg
     9841 caccggcatg gtgccgaaca actacatgtc gaatttcgat cctcggccgg gcaacgctct
     9901 gtcgatcgcg ccgggcaaga gggtcaccac gtcgatgtcg ccgatgatgg ccctgcgcga
     9961 aggccgcgtc gtctatgcgc tcggcctgcc cggtggccgg aagatcttcc ccgccgccct
    10021 gcaggcgctg ctgaacctca tcgaccacgg catgactctg caggaggcgg tggaggcgcc
    10081 gcgggtctgg accgaggggc ccgtcctgga actcgagcat ggcgttccgg ccggcgttcg
    10141 tgagggtctg caagcccgcg gccacaagct gcaggtggtg ccgacggtgg ccggcggcat
    10201 gaacgcgatc cagttccacg acgacggcag catgagcggc gccgcctgct ggcgtgccga
    10261 cggggtagcg ctcgccctgg gcggcggtct cgcccgcgct ggcgtgcgct tcgtgctgcc
    10321 gcgatgatcg atagaaagag gtgaacacga tgctgacgat tgatcccctg accgccgccg
    10381 gcgtcctgat cgcgacggca gcgaccgatg cggtctatgt gatgt
//
LOCUS       DASWGA010000686         3209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1848990, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000686 DASWGA010000000
VERSION     DASWGA010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1848990"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="VF991_16005"
     CDS             <1..410
                     /locus_tag="VF991_16005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HEX9557999.1"
                     /translation="AVLEARCAVAIGANDVYLNVAGGLRIGEPAADLAVAAAVVSSLA
                     DQPVPPEMVVFGEIGLGGEVRPVSQREARLREAAKLGFSSALVPRGRTGVGAALRTPE
                     GIAIDEIEHLADLVARFQPADGSLKRPPRRERE"
     gene            433..1044
                     /locus_tag="VF991_16010"
     CDS             433..1044
                     /locus_tag="VF991_16010"
                     /inference="COORDINATES: protein motif:HMM:NF014704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEX9558000.1"
                     /translation="MEQLGITVFDVAVIAVAIFGALIGTSSGFAHAVMFIASWVAAGW
                     VAWRYAKVIQPEVEQLVGSTELAYFMSMLAVFVAALIVLVMLTNALSRSIRSGPLGKP
                     DRILGAGFGVLCAWVAIGTAFLFYGYLGPRQLPPAVEGGATFPAIKEMANFVEPYLPP
                     GFRTRLQGRNVDAGSISIPSPADSIPSPADSIPSPADTPKPPQ"
     gene            1091..2551
                     /gene="purF"
                     /locus_tag="VF991_16015"
     CDS             1091..2551
                     /gene="purF"
                     /locus_tag="VF991_16015"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEX9558001.1"
                     /translation="MLNTPERLDRDSDKFHEECALFGIYGTSDAAAHTALGLHALQHR
                     GQEASGIVTFDGRHFHNHRAAGLVGDIFGAPSVMAKLKGYTAIGHNRYATTGGSSDRN
                     IQPIFADFDFGGLALAHNGNLTNAYLLRKELVRIGCLFQSTTDTEVINHLIARSNYST
                     LVDRLIDALGRVKGAYSLLLLTNEALLGVRDPMGVRPLVIGRLEDAWIVTSESCALDI
                     IGARFVRDVEPGEIVIVDGSGLRSIKPFTKVPRRFCVFEHIYFARPDSRVEGVGVYAA
                     RKRIGMELAKESPIDADVVVPVPDSGVPAAIGYAHQSGLPFELGIIRNHYVGRTFIEP
                     AENIRHLGVRLKHNANRALIEGKRVILVDDSIVRGTTSMKIVEMVRQAGAREVHMRIA
                     APPTTNPCFYGIDTPERDKLLASHYDVAGMAKFIKVDSLAFVSIDGLYRAMGLPGRDP
                     NQPAFCDACFTGDYPISLDDQLGVEDRQLSLLVETA"
     gene            2562..>3209
                     /locus_tag="VF991_16020"
     CDS             2562..>3209
                     /locus_tag="VF991_16020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007560280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9558002.1"
                     /translation="MTGAPAGRPPGRLAGRLALITGASRGLGAATALAYAREGAHCVL
                     VARTVGGLEAVDDQIKALGGSATLVPLDVTDGPGIDRLGAALYERYGRLDVLLGNAGI
                     LGTLSPVGHIEPTIFERVMAVNVTANWRLIRSLDPLLRQSDAGRAIFVTSGVARRVVP
                     YWGAYAASKAALDMLVGIYAAEVAHTNVRVNLFNPGPIRTALRAQAFPGEDPAKQT"
BASE COUNT          459 a         1176 c         1024 g          550 t
ORIGIN      
        1 tggccgtgct cgaggcgcgc tgcgccgtcg cgatcggcgc caacgacgtc tatctcaacg
       61 tcgccggcgg cctgcgcatc ggcgagccgg cggccgacct cgccgtggcg gcggccgtgg
      121 tgtcgtcgct cgccgaccag ccggtgccgc ccgagatggt ggtgttcggc gagatcggcc
      181 tgggcggcga ggtccgtccg gtcagccagc gcgaggcgcg cctgcgcgag gcggccaagc
      241 tgggcttcag cagcgccctc gtgccgcgcg gccggaccgg cgttggcgcc gcgctgcgca
      301 cgcccgaggg catcgccatt gacgaaatcg agcatctggc cgaccttgtg gcgcgctttc
      361 aaccggccga cggctccctc aaacggccgc ctcggcgtga gcgcgagtag gtcacggagc
      421 gtataagggg cgatggagca actcggaatc accgttttcg acgtcgccgt catcgccgtc
      481 gctattttcg gggccttgat cggcacgtcg agcggctttg cccatgccgt catgttcatc
      541 gcctcgtggg tcgccgccgg ttgggtggcg tggcgctatg ccaaggtgat ccagcccgag
      601 gtcgagcagc tggtcggcag caccgagctt gcctatttca tgtcgatgct ggcggtcttc
      661 gttgccgccc tgatcgtgct ggtcatgctg accaacgcgc tgtcgcgctc gatcaggagc
      721 ggtccgctcg gcaagcccga ccgcatcctg ggcgcgggct ttggcgtgct ctgcgcctgg
      781 gtggcgatcg gcaccgcctt cctgttctac ggctatctcg gcccccgcca gttgccgccg
      841 gcggtcgagg gcggcgccac cttcccggcg atcaaggaaa tggccaattt cgtcgaaccc
      901 tacctgccgc ccggcttccg cacccgcctg cagggccgca acgtcgacgc cgggtcgatt
      961 tccatcccgt caccggccga ttccatcccg tcaccggccg attccattcc gtcgccggcc
     1021 gatacgccca aaccgccgca gtgacttatc cttgatggcg cgggcgacgg tccccagata
     1081 taaacccgcc gtgctcaata cccccgaacg cctcgaccgc gactccgaca agttccacga
     1141 ggagtgtgcg ctgttcggca tctacgggac gtccgatgcc gccgcccaca ctgccctcgg
     1201 cctgcatgcc ctgcagcatc gcggtcagga agcctccggt atcgtcacct tcgacggccg
     1261 gcatttccac aaccaccgcg ccgccggcct ggtcggcgac atcttcggcg ccccctcggt
     1321 catggccaag ctcaagggct acacggcgat cggccacaac cgctacgcca cgaccggcgg
     1381 ctcgtccgac cgcaacatcc agccgatctt cgccgatttc gacttcggcg gcctggccct
     1441 cgcccacaac ggcaacctca ccaacgccta cctgctgcgc aaggagctgg tgcggatcgg
     1501 ctgcctgttc cagtcgacga ccgacaccga ggtcatcaat cacctgatcg cccggtcgaa
     1561 ctactcgacc ctcgtcgacc gcctgatcga cgcgctgggc cgcgtcaagg gcgcctattc
     1621 gctgctgctg ttgaccaacg aggcgctgct tggcgtgcgc gatccgatgg gcgtgcggcc
     1681 gctggtgatc ggccggctgg aagacgcctg gatcgtgacc tccgagagct gcgcgctcga
     1741 catcatcggc gcccgcttcg tgcgcgacgt cgagccgggc gagatcgtca tcgtcgacgg
     1801 cagcgggctg cgctcgatca agccgttcac caaggtgccg cgccgcttct gcgtgttcga
     1861 gcacatctac ttcgcccgcc ccgactcccg ggtcgagggt gtcggcgtct atgccgcccg
     1921 caagcgcatc ggcatggagc tcgccaagga aagcccgatc gacgccgacg tggtcgtgcc
     1981 ggtgcccgat tcaggcgtgc cggcggcgat cggctatgct caccagtcgg gcctgccgtt
     2041 cgagctcggc atcatccgca accactatgt cggccgcacc ttcatcgagc cggccgaaaa
     2101 tatccgccat ctcggcgtgc gcctgaagca caacgccaac cgcgccctga tcgagggcaa
     2161 gcgcgtgatc ctggtcgacg attcgatcgt gcgcggcacc acctcgatga agatcgtcga
     2221 gatggtgcgc caggccggcg cccgcgaggt gcacatgcgc atcgccgcgc cgcccacgac
     2281 caacccgtgc ttctacggga tcgacacgcc cgagcgcgac aagctcctgg cctcgcacta
     2341 cgacgtggcc ggcatggcga agttcatcaa ggtcgattcg ctggccttcg tgtcgatcga
     2401 tggcctctat cgcgccatgg gcctgccggg ccgcgatccc aaccagccgg ccttctgcga
     2461 cgcctgtttc accggcgact atccgatctc gctcgacgac caactgggcg tcgaggaccg
     2521 ccagctttcc ctcctggtcg agacggcctg agacgttttt catgactggc gctcctgctg
     2581 gccggccccc tggtcgattg gccgggcgcc ttgcgctcat caccggcgcg tcgcgcggcc
     2641 tgggggcagc caccgcgctg gcctacgccc gcgagggtgc gcattgcgtg ctggtcgccc
     2701 gtaccgtggg cggcctcgaa gccgtcgacg accagatcaa ggcgctgggc ggctcggcca
     2761 ccctggtgcc gctcgacgtc accgacgggc ccggcatcga tcgcctgggc gcggcgctct
     2821 acgagcgcta cggccggctc gacgtgcttt taggcaatgc cggcatcctg ggcacgctgt
     2881 cgccggtcgg ccacatcgag cccactattt tcgagcgggt catggcggtg aacgtcaccg
     2941 ccaactggcg cctgatccgc tcgctcgatc cgctgctgcg ccaatccgac gccggccgcg
     3001 ccattttcgt cacctccggc gtagcgcgcc gcgtggtgcc ctattggggc gcctatgcgg
     3061 ccagcaaggc cgcgctcgac atgctggtcg gcatctatgc cgccgaggtc gcgcacacca
     3121 acgtgcgcgt gaacctgttc aatccgggcc cgatccgcac cgccctgcgc gcccaggcct
     3181 ttccgggcga ggatccggcg aagcagact
//
LOCUS       DASWGA010000687         3018 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_326655, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000687 DASWGA010000000
VERSION     DASWGA010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3018
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326655"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1149)
                     /locus_tag="VF991_16025"
     CDS             complement(<1..1149)
                     /locus_tag="VF991_16025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX9558003.1"
                     /translation="MTTLAPVQRLRLLRELERKVLWLSAWTVHHANHLRPNRDGLKVG
                     GHQASCASLATVMTALYFSVLKPEDRVAVKPHASPVFHAIQYLFGHQTRDKLERFRGF
                     GGAQSYPSRTKDIDDVDFSTGSVGLGVAMTLFSSLVQDYVRLKNLADYQRPTGRMVAL
                     VGDAELDEGNIFEALLEGWKHDVRNLWWVIDYNRQSLDGVVNDRLFGRIGEMFELVGW
                     RVITLKYGKLLEAAFAQPDGEQLRQWIDACPNSLYSALVYKGGAGWREALTRDLNQYP
                     GIRRILEQHDDANLHRLLTNLADHDMQAVLDAFESIDDDKPTCFIAYTIKGQGLPFAG
                     HKDNHSGLMTLDQMAGFKQGMGVADGAEWDKFAGLSAKPGELQAFIAAA"
     gene            1249..1707
                     /locus_tag="VF991_16030"
     CDS             1249..1707
                     /locus_tag="VF991_16030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX9558004.1"
                     /translation="MISLDAIDRRILDRLQKEGRLSNADLAEQVGLSSSPCWRRVKAL
                     EEAGVIKGYAARIDARSVGLSVNVFMSVSLTTQVEKALQAFERAAAERPEVMECYLMT
                     GDSDYLLRVVVPDLEAYERFVMDFTKIPGIAQIRSSFALRPVKQGAALPL"
     gene            1865..2593
                     /locus_tag="VF991_16035"
     CDS             1865..2593
                     /locus_tag="VF991_16035"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX9558005.1"
                     /translation="MAPVVFDPAIGRQFIKYARLVAGRGYVHNTLGNIVMRAPHPDFP
                     HGLAYTKHAEVSLEEMELENIVITDVPTSRILLGERMTSVGHNLSREILRLRPDIGAT
                     IHVHDDSIIALWGSGAPPEFNVLSLDPPFVLGKPVHFVPAHVDVEADVSSVAGFIQDT
                     NAVVLVGHGITTLGRNVSEAYHRLNTLTAEVRRCIVAEQIAALKGTKPAYRSREEIEA
                     MYRFAERIIYPTRAENVMHEEAAE"
     gene            2595..>3018
                     /locus_tag="VF991_16040"
     CDS             2595..>3018
                     /locus_tag="VF991_16040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558006.1"
                     /translation="MRAPVATILLLLLAAVLYAPMLACFIDAPNGDAFGRGLALAYGA
                     ILAGLLWLVLAALLIIAAVPGRMPLWARIGAVVLWPLSCVAVWMAGDAHGAGDASAIW
                     VPALLPPLIALYALWARLPVLHTVFRAGVTSAVLGGAIA"
BASE COUNT          494 a         1001 c          980 g          543 t
ORIGIN      
        1 cgcggctgcg atgaaggcct gcaattcgcc gggcttggcg gaaagcccgg cgaacttgtc
       61 ccactccgcg ccgtcggcga cgcccatacc ctgcttgaag ccggccatct gatcgagcgt
      121 catcaggccg gagtgattgt ccttgtggcc ggcgaagggc aagccctggc ccttgatggt
      181 gtaggcgatg aagcaggtcg gcttgtcgtc atcgatgctc tcgaaggcgt cgagcacggc
      241 ctgcatgtcg tggtcggcga gattggtcag cagccggtgc aggttggcat cgtcgtgctg
      301 ctcgaggatg cggcgaatgc cgggatactg gttgaggtcg cgcgtcagcg cctcgcgcca
      361 gccggcgccg cccttgtaga ccagcgccga gtagagcgag ttggggcagg catcgatcca
      421 ttgccgcagt tgctcgccgt cgggctgggc gaaggccgcc tccaaaagct tgccgtactt
      481 cagcgtgatc acccgccagc cgaccagctc gaacatctcg ccgatgcggc cgaacaggcg
      541 gtcgttgacc acgccatcga ggctctggcg gttgtagtcg atcacccacc acaggttccg
      601 gacgtcgtgc ttccagcctt cgagcagcgc ctcgaagatg ttgccttcgt cgagctcggc
      661 atcgccgacc agcgccacca tgcgtcctgt cggacgttgg tagtcggcca aattcttcag
      721 ccgcacatag tcctgcacca gcgaggagaa cagcgtcatg gcgacgccca gcccgaccga
      781 gccggtggag aaatcgacgt cgtcgatgtc cttggtgcgc gacggatagg actgcgcgcc
      841 gccgaaaccg cggaagcgtt ccagcttgtc gcgcgtctga tggccgaaca ggtactggat
      901 ggcgtggaac accggcgagg cgtgcggctt caccgccacg cgatcttccg gcttcagcac
      961 cgagaagtag agcgcggtca tcaccgtggc cagcgaggcg cacgaggcct ggtggccgcc
     1021 gaccttcagc ccgtcgcggt tgggccggag atggttggcg tgatggacgg tccaggcgct
     1081 cagccacagc accttgcgtt cgagctcacg cagcagccgc agacgctgca cgggggcgag
     1141 ggtggtcatc gacagggcat acgcctgaag agggggaaaa tccttgcgtt tggaccgtca
     1201 aagccgctgt atagggtaga attgcgccaa aaataggaag tttgagcaat gatctccctc
     1261 gatgctatag accgccgcat tctcgatcgt ctgcagaagg aaggtcggtt gagcaatgcc
     1321 gatctggccg agcaggtggg cctgtcctcc tcgccgtgct ggcggcgagt caaggcgctg
     1381 gaagaggcgg gcgtcatcaa gggctatgcc gcccggatcg acgcccggtc ggtcgggctt
     1441 tcggtcaacg tcttcatgag cgtgtcgctc accacccagg tcgagaaggc gctgcaggcc
     1501 ttcgagcgcg ccgccgccga gcggcccgag gtgatggagt gctatttgat gactggcgac
     1561 agcgactacc tgctgcgcgt cgtcgtgccc gacctcgaag cctatgagcg tttcgtcatg
     1621 gacttcacca agatcccggg catcgcccag atcagaagct cgtttgcgct ccggcccgtc
     1681 aagcagggcg cggcgttgcc gctgtgactc tcatgttcct ctcccccttg ggggagaggt
     1741 taggtgaggg gatcgaagac tgcctcctgc agcaccccct cacccagcct ctcccccaag
     1801 ggggagagga gcatgaccct gtactcatga tagattcagg ctcccccggg aggagaacca
     1861 agacatggcc ccagtcgtct tcgatcccgc catcggccgc caattcatca aatatgcccg
     1921 cctggtcgcc ggtcgcggct acgtccacaa cacccttggc aacatcgtga tgcgcgcgcc
     1981 gcatcccgac ttcccgcacg ggctcgccta caccaagcac gccgaggtct cactcgaaga
     2041 gatggagctc gagaacatcg tcatcaccga cgtgccgacc agccgcatcc ttttaggcga
     2101 gcgcatgacc agcgtcggcc acaatctcag ccgcgagatc ctgcgcctgc gtcccgacat
     2161 cggcgccacc atccacgtgc acgacgattc tatcatcgcg ctctggggct ccggtgcccc
     2221 gccggagttc aacgtgctgt cgctcgatcc gccgttcgtg ctgggcaaac cggtgcattt
     2281 cgtgccggcc catgtcgacg tcgaggcgga tgtgagttcg gtcgcgggct tcatccagga
     2341 caccaatgcc gtcgtgctgg tcggccacgg catcaccacg ctggggcgca acgtttccga
     2401 ggcctaccac cgcctgaaca cgctgaccgc cgaggtgcgc cgctgcatcg tcgccgagca
     2461 gatcgccgcc ctgaagggaa ccaagcccgc ctaccgctcg cgcgaggaga tcgaggcgat
     2521 gtaccgcttc gccgagcgca tcatctatcc gacgcgcgcc gagaatgtca tgcacgagga
     2581 ggcggccgag tagcatgcgc gctcccgtcg cgaccatcct gctgctgctg ctggcggccg
     2641 tgctctatgc ccccatgctg gcctgcttca tcgacgcccc gaacggcgac gccttcggac
     2701 gcggcctggc cttggcctac ggcgcgattc tcgccggcct gctgtggctg gtcctggccg
     2761 cactgctgat catcgccgcc gtcccgggtc gcatgcccct ttgggcgagg attggcgcgg
     2821 tggtcctgtg gccgctgtcg tgcgtcgctg tatggatggc gggcgacgcc catggcgcgg
     2881 gcgatgcttc ggcgatctgg gtgccggcgc tgctgccgcc gctgatcgcg ctctacgcgc
     2941 tgtgggcacg cctgccggtc ctgcacaccg tctttcgcgc cggcgtgacc agcgcggtgc
     3001 tgggcggcgc catcgctt
//
LOCUS       DASWGA010000688         3288 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_838879, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000688 DASWGA010000000
VERSION     DASWGA010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3288
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_838879"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VF991_16045"
     CDS             complement(<1..726)
                     /locus_tag="VF991_16045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX9558007.1"
                     /translation="MSRRTLVGATGAAAVTLAAGRAFAQAAPTPAAPPSTITSPPRDF
                     SRNGAPTTYFTDPDILSVDPSFNSLRQPNSAIQRLWTGALWSEGPAWNAQGRYLVWSD
                     IPNNRQLRWLEDDGRVSVFRNPSNNSNGNTFDFQGRQLSCEHLMRRVVRYELDGSVTV
                     LADAYNGKKLNSPNDVVPHPDGSYWFTDPPYGGQFYEGTVDVPGGPSNRAGRFKHRLG
                     QPPEVANLKRELPNNVYRVDPSGK"
     gene            complement(829..1305)
                     /locus_tag="VF991_16050"
     CDS             complement(829..1305)
                     /locus_tag="VF991_16050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEX9558008.1"
                     /translation="MTVRVQETDFDIGAELDRLIEGNRRIGGLAVFVGLVREMHVREG
                     LHRERIDALTLEHYPGMTEKALEEIEAEACRRWPLEATLIVHRYGRLEAGDRIVLVAV
                     GSPHREAAFEACEFLVDWLKTKAPFWKLEETPAGEKWVGAHEGDDAAAARWEKNRR"
     gene            complement(1310..1561)
                     /gene="moaD"
                     /locus_tag="VF991_16055"
     CDS             complement(1310..1561)
                     /gene="moaD"
                     /locus_tag="VF991_16055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020090648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HEX9558009.1"
                     /translation="MKIRYFAWMKRTVGVPDEEVTLPVEVKTVGDLVAWLRHRSPRHA
                     EALAEGAAFGAAVDKRTATFDAPLAGVREVAFFPPFTGG"
     gene            complement(1558..2130)
                     /gene="pgsA"
                     /locus_tag="VF991_16060"
     CDS             complement(1558..2130)
                     /gene="pgsA"
                     /locus_tag="VF991_16060"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEX9558010.1"
                     /translation="MLNLPNLLTLSRIAAIPLVVACFWLDHGWAQWLSAAIFAIACIT
                     DWFDGYFARRYHQISRFGRFLDPIADKLLVAAALVMLVQNGQLSGLNVLAALIILARE
                     ILVSGLREFLAELRVGVPVSQLAKWKTGAQMVAIAFLLLGDAVPPIIDKIGLALIWVA
                     AVLTLITGYDYLRTGLRHMAEDRPTAGGAE"
     gene            complement(2143..>3288)
                     /locus_tag="VF991_16065"
     CDS             complement(2143..>3288)
                     /locus_tag="VF991_16065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEX9558011.1"
                     /translation="RIRALAHIQSHQSIALPSIDEADIFAAHGEGGQVCVQMFFLRAG
                     QNLGNRAYFPSHTKDLDEPAVLSAFIGQFYESRQAPKLILTSHDVAESDLLERALAMT
                     AGHKVEIRHPRRGDQKDALDQAVLNAREALARRMAERGTQRQLLEGVARVFGLDGPPE
                     RIEIYDNSHIQGSAPIGAMVVAGPDGFTKNAYRKFNIKTEGAAGDDFAMMREVLSRRF
                     GRALREDPERGEEHWPDLVLIDGGQGQLEVARQVLSELGLEDIAIVGIAKGPDRDAGR
                     ERFFQPGKPPFSLEPRDPVLYFLQRLRDEAHRFAIGTHRTRRAADITRSALDEVPGIG
                     AGRKRALLHHFGSARAVGAATLEDIKSVPGISGALAQKIHDHFRGGR"
BASE COUNT          529 a         1072 c         1149 g          538 t
ORIGIN      
        1 ctttccgctc gggtcgacac ggtacacgtt gttcggcagc tcccgcttca ggttggcgac
       61 ctccggaggc tggccgaggc ggtgcttgaa gcggccggcg cggttcgacg gcccgccggg
      121 cacgtccacc gtgccctcat agaactgccc gccgtagggc ggatcggtga accagtaact
      181 gccgtcggga tgggggacga catcgttggg cgagttcagc ttcttgccgt tgtaggcgtc
      241 agcgagcacg gtcaccgagc catcgagttc gtagcgcacg acccgccgca tcaggtgctc
      301 gcacgacagc tggcggccct ggaagtcgaa ggtgttgccg ttgctgttgt tcgacgggtt
      361 gcggaagacg ctcactcgcc cgtcgtcctc gagccagcgc agttggcggt tgttgggaat
      421 gtcgctccac acgagatagc gaccctgcgc gttccacgcc ggcccttccg accacagggc
      481 gccggtccat agccgctgga tcgcgctgtt gggctgtcga agagagttga acgacggatc
      541 gaccgagagg atgtccgggt cggtgaaata ggtggtgggc gcgccgttgc ggctgaaatc
      601 gcgcggcggc gaggtgatcg tcgagggcgg tgcggcgggc gtcggcgccg cctgggcaaa
      661 ggcccgtcct gcggccagtg tcacggcggc cgcaccggtt gcgccgacca gagtgcgacg
      721 ggacatcgat gcggtcatga gcgtcactcc cagcggttgt gtcggtggac ggactcttag
      781 caaagctgtc gaacggagaa agacagcatc acgaactatt tcgcggtgct atcggcgatt
      841 cttctcccag cgcgccgcgg cggcatcgtc gccttcgtgg gcgccgaccc atttctcgcc
      901 ggcaggagtc tcttcgagct tccagaacgg cgccttggtc ttgagccagt cgaccaggaa
      961 ttcacaagcc tcgaaggccg cttcgcggtg cggcgagccc acggccacca agacgatgcg
     1021 atcgcccgct tcaagccggc cgtagcgatg cacaatgagt gtagcctcga gcggccagcg
     1081 gcggcaggcc tcggcttcga tctcttccag cgccttctcg gtcatgccgg gatagtgctc
     1141 cagcgtgagc gcgtcgatgc gctcgcggtg cagaccctcg cgcacgtgca tctcgcgcac
     1201 caggccgacg aacaccgcca gcccgccgat ccgccggttg ccctcgatca ggcgatcgag
     1261 ctcggcgccg atgtcgaaat cagtctcctg cacgcgcacg gtcatgaggt cagccgcccg
     1321 tgaaaggtgg aaagaacgcg acttcgcgca cgccggcgag cggcgcatcg aaggtcgcgg
     1381 tgcgcttgtc gaccgcggcg ccgaaagcgg cgccttccgc cagcgcctcg gcatggcgcg
     1441 ggctgcgatg gcgcagccag gcgaccagat cgcctaccgt cttgacctcg accggcagcg
     1501 tcacctcttc gtcgggcacg ccgacggtac gcttcatcca ggcgaaatat cggatcttca
     1561 ttccgcccct ccggcagtgg ggcgatcctc ggccatgtgg cgcaacccgg tgcgcaggta
     1621 gtcgtagccg gtgatcaggg tcagcaccgc ggcgacccag atcagcgcca gcccgatctt
     1681 gtcgatgatc ggcggcaccg catcgcccaa cagcaggaag gcgatggcca ccatctgcgc
     1741 gccggtcttc cacttggcga gctggctcac cggtacgccg accctgagct cggccaagaa
     1801 ctcgcgcagg ccggagacca ggatctcgcg cgccaggatg atcagcgccg ccagcacgtt
     1861 gaggccgctc agttggccgt tttgcaccag catcaccagc gccgccgcga ccaaaagctt
     1921 gtcggcgatg ggatcgagga agcgaccgaa gcgcgaaatc tggtgatagc gccgcgcgaa
     1981 atagccgtcg aaccagtcgg tgatgcaggc gatggcgaaa atcgccgccg acagccactg
     2041 cgcccagccg tggtcgagcc agaagcaggc cacgaccagc gggattgccg cgatgcgcga
     2101 cagggtgagc aggttgggaa ggttgagcat ggctgactag tcttagcggc cgccccggaa
     2161 gtggtcatgg attttctggg cgagcgcgcc ggagatgccg ggcaccgact tgatgtcctc
     2221 gagcgtcgcg gcaccgacgg cgcgggcact gccgaaatgg tgcagcaggg cgcgcttgcg
     2281 gccggcgccg atgcccggca cctcgtcgag cgccgagcgc gtgatgtcgg ccgcgcggcg
     2341 cgtgcgatgc gtgccgatgg cgaagcggtg cgcctcgtcg cgcaggcgct gcaggaaata
     2401 cagcaccgga tcgcgcggct cgagcgagaa cggcggcttg cccggctgga agaagcgttc
     2461 gcggccggcg tcgcggtccg gacccttggc gatgccgacg atggcgatgt cctcgaggcc
     2521 gagctcgctc agcacctggc gcgccacttc gagctggcct tgcccaccat cgatcagcac
     2581 caggtccggc caatgctcct cgccgcgctc gggatcctcg cgcagcgcgc ggccgaagcg
     2641 acgcgacagc acctcgcgca tcatggcgaa gtcgtcgccc gcggcgccct cggtcttgat
     2701 gttgaactta cggtaggcgt tcttggtgaa accgtccggc cccgccacca ccatggcgcc
     2761 aatcggtgcg ctgccctgga tgtggctgtt gtcgtagatc tcgatgcgtt cgggcggacc
     2821 gtcgaggccg aacacccgcg ccacgccctc cagcagctgg cgctgggtgc cgcgctcggc
     2881 catgcgacgt gccagcgcct cgcgggcgtt gagcacggcc tggtcgaggg cgtccttctg
     2941 gtcgccacgc ctgggatggc ggatctcgac cttgtggccg gccgtcatgg cgagcgcgcg
     3001 ttcgagaagg tcgctttcgg ccacgtcgtg gctggtcagg atcagcttgg gcgcctggcg
     3061 cgattcgtag aactggccga tgaaggccga cagcacggcg ggttcgtcga ggtctttggt
     3121 atggctcggg aaataggcgc ggttgccgag gttctggccg gcgcgcagaa agaacatctg
     3181 gacgcagacc tgcccgccct cgccatgggc agcgaagatg tcggcttcgt cgatcgaggg
     3241 cagggcgatc gactgatgcg actggatgtg ggcgagcgcg cggatgcg
//
LOCUS       DASWGA010000689         6415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_205832, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000689 DASWGA010000000
VERSION     DASWGA010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6415
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205832"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2420)
                     /locus_tag="VF991_16070"
     CDS             complement(<1..2420)
                     /locus_tag="VF991_16070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9558012.1"
                     /translation="MRFSHFFIDRPIFASVLSIIILIVGAIAQRNLPIAEYPEIAPPT
                     VNVTATYPGASAEVIAATVATPLELEINGVDDMLYINSQSTGDGRLSINVVFKPGVDI
                     DQAQVNVQNRVQVAQPRLPQDVQRLGVVVRKASPDLMMVVHMTSPDGSRDQQYISNYA
                     TLYVKDVLSRVDGVGNVLVFGARDYSMRVWLDPARVAGHNLTAAEVVAALRAANLQVA
                     AGSINQAPAVSAGGFTLSVQTLGRLTAPEEFGNIVLRAEPDGSVTRLRDVARVELGAQ
                     DYTVNAYLDNKNATALAIFQRPGSNALATSDGVKAAMERLKKAFPQGLDYSVVYNPTE
                     FIQASVDAVIETLFEALLLVVIVVILFLQTWRAAIIPLLAIPVSLIGSFAVMSAVGIS
                     FNTLSLFGLVLAIGIVVDDAIVVVENVERYLTQGLSPKAAAHKTMDEVGGALIAISLV
                     LIAVFLPTAFITGLQGTFYKQFAITIAASTAISAFVSLTLSPAMAALLLKTHALSHIE
                     KPKPTLLERLAWPLTWFFRQFNRGFEALSNFYGRATARLIRMATVILVIYAGLLVLTS
                     WRLVETPTGLVPQLDRSYLIAAMQLPQGATLERTDKLVRQASEMIMATPGVSHAVAFV
                     GFDGATFTNAPNTGVIFVTLKPFAERRDEPKDKILAALRGKMFSLREAFVFVLEPPSV
                     PGIGTGGGLKGYVQDRAARGLPALEGATWALAGAAGQTPGLTQAFTLFSTRTPQIWAE
                     IDRTKAEQLGVPIGRVFETLSIYMGSAYVNDFNMFGRTYRVTAQADGDYRLDAESVSK
                     IRVRSTEG"
     gene            complement(2448..3596)
                     /locus_tag="VF991_16075"
     CDS             complement(2448..3596)
                     /locus_tag="VF991_16075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014893126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9558013.1"
                     /translation="MSSVRRRLLALAGVAVLFPSSVVFGQGGPPAMPVDVAPPIAKRV
                     TQWDEFSGRFEAVASVEVRARVSGFIEQLHFKDGQLVSVGDPLFTIDKRPYEIAVESA
                     KAEVARNKAQVGLAELQVQRGASLITSRTITEQENDQRKANLDVARAQLKAAEAGLRS
                     AELNLDWTDVRAPLAGRISDRKVDAGNLIQGGQQGATMLATIVTLDPIRFVFDVSETD
                     YLRYTRLFLSGELVSSREKNPVRIRLADETEWTRTGRVDFVDNTFAPRSGTIRTRAIV
                     DNKTQLLAPGIFGRVQLFGGEYDALMIPDTAVVSDQSRKIVFTVGEDNVVKAKPVTLG
                     PIVDGLRVVRDGLAATDKVVLDGLANPMVRSGAKVVPQKGEITTAKAK"
     gene            3789..4811
                     /locus_tag="VF991_16080"
     CDS             3789..4811
                     /locus_tag="VF991_16080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9558014.1"
                     /translation="MIKRILAASAVVGAIACWAAAASAQSTLDTVKKRGQLICGVNVG
                     LGGFSLADSQGKWSGLDIDMCNAVAAAVLGDATKAKYVPLSAQQRFLALQSGEIDMLV
                     RNSTITLERDAGLGLQYAGVNFYDGQGFMVAKKLNVKSLAELASATICVAQGTTHEFN
                     MASWFRGRNLTTKAVVFESVDIMYEAFFGGRCDAITQDSSALASALATRGRQGDYMIL
                     PELISKEPLGPFVRRGDDVWLAVVRWSLFAMLEAEERAITKANVDEQLKSTDALVQRF
                     LGAKPGNGKALQLDEAWAYNIVKQVGNYGESYERNVGVGSPLKLARGLNGLWTKGGLM
                     YPLPLR"
     gene            4819..5721
                     /locus_tag="VF991_16085"
     CDS             4819..5721
                     /locus_tag="VF991_16085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018245568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEX9558015.1"
                     /translation="MDRGPLNASIVEAFDILPPQLQTAARYMLDRPDDVALLSMREQA
                     RRAGVPPATMTRLAQRLGLEGYDQVRELYAGAVRAGTLGFAGKAGAQVEAQKLRGERA
                     LASDMALTLSRQIAALAEPESLERLADAAGRLHEAQRVYCLGLRSCHAAAWHFHYMLS
                     LLGDKTVMLDDAGGTGLDAIRDAGPGDVVLAASVEPYARATIEGAQYAAARGVPVVAL
                     TDSEVSPLARVAGAAILVATESPSFFHTMTPLLAVAEILAALVAGRGGNKALAALEHT
                     EAQLSAFGVHLPRRGAKEAGRAKA"
     gene            5718..>6415
                     /locus_tag="VF991_16090"
     CDS             5718..>6415
                     /locus_tag="VF991_16090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013850079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9558016.1"
                     /translation="MTHILHRQIAGTLPVAAGGRGIEIVDTAGKRYIDASGGAAVSCL
                     GHGHPAVTAALHEQLDKLAYAHTGFFTTEVAERLADRLIADAPAGISHAYLVSGGSEA
                     IEAALKMARQYFIERGQPERRHVIARRQSYHGNTLGALAAGGNEWRRAPFSPLLIETH
                     HIDPCFAYRFQEPGETEEAYAERAAGALEAKIHDLGPDTVMAFVAETVVGATAGAVPP
                     AKGYFRRIREICDR"
BASE COUNT         1064 a         2110 c         2221 g         1020 t
ORIGIN      
        1 tgcccctcgg tcgagcgcac gcggatcttc gacacgcttt ccgcatccag gcggtagtcg
       61 ccgtccgcct gcgccgtgac gcgataggtg cggccgaaca tgttgaagtc gttgacgtag
      121 gccgagccca tgtagatcga cagcgtctcg aacacgcggc cgatcggcac gccgagctgc
      181 tcggccttgg tgcggtcgat ctcggcccag atctgcggcg tgcgcgtgct gaacagggtg
      241 aaggcctggg tcagtcccgg cgtctgtccg gcggcacccg ccagcgccca ggtggcgcct
      301 tcgagcgccg gcaggccgcg cgcggcgcgg tcctggacat agcccttcag gccgccgccg
      361 gtgccgatgc cgggcaccga gggcggctcg agcacgaaga cgaaggcctc gcgcagcgag
      421 aacatcttgc cgcgcaaggc cgccaggatc ttgtccttgg gctcgtcccg ccgctctgcg
      481 aacggcttca gggtgacgaa gatcacgccg gtgttcggcg cgttggtgaa ggtggcgcca
      541 tcgaagccga cgaaggccac ggcgtgcgac acgccgggcg ttgccatgat catctcggac
      601 gcctggcgca ccagcttgtc ggtgcgctcc agcgtcgcgc cttgcggaag ctgcatggcg
      661 gcgatcagat aggaacgatc gagctgcggg accaggccgg tgggtgtttc caccaaccgc
      721 cagctggtca ggaccagcag tccggcatag atcaccagga tgaccgtcgc catgcggatc
      781 agccgcgccg tggcgcggcc atagaaattc gacagcgcct cgaagccacg attgaactgg
      841 cgaaagaacc aggtgagcgg ccaggccagc cgttcgagca gcgtcggctt gggcttctcg
      901 atatgcgaca gcgcatgggt cttgagcagc agcgccgcca tggcgggcga cagcgtcagc
      961 gacacgaagg ccgagatcgc cgtcgaggcg gcgatggtga tggcgaactg cttgtagaag
     1021 gtgccctgca ggccggtgat gaaggcggtt ggcaggaaca ccgcgatcag caccagcgag
     1081 atggcgatca gcgcgccgcc cacctcgtcc atggtcttgt gcgccgcggc cttgggcgac
     1141 aggccctggg tgaggtagcg ctcgacgttc tcgaccacga cgatggcgtc gtcgacgacg
     1201 atgccgatcg ccagcaccag cccgaacagc gacagcgtgt tgaaagagat gccgaccgcc
     1261 gacatcacgg cgaacgaacc gatcagtgac accgggatgg cgagcagcgg gatgatcgcg
     1321 gcgcgccagg tctgcaggaa gaggatcacc acgatcacga ccagcagcag cgcctcgaac
     1381 agcgtctcga tcaccgcgtc gaccgaggcc tgaatgaact ccgtgggatt gtagaccacc
     1441 gaatagtcga ggccctgggg gaaggccttc ttcaggcgct ccatcgcggc cttcacgccg
     1501 tcggaggtgg cgagcgcgtt cgaacccgga cgctggaaga tggcgagcgc cgtggcgttc
     1561 ttgttgtcga gataggcgtt caccgtgtag tcctgcgcgc ccagctcgac acgagccacg
     1621 tcgcgcagcc gcgtcaccga gccatccggc tcggcgcgca acacgatgtt gccgaactcc
     1681 tccggcgcgg tcagccgtcc cagggtctgg accgacaagg tgaagccgcc ggccgatacc
     1741 gccggcgcct ggttgatgga ccccgcggcg acctgcaggt tggcggcgcg cagggctgcg
     1801 accacttcgg ccgccgtcag attgtggccg gcgacgcggg cgggatcgag ccacacgcgc
     1861 atggaatagt cgcgcgcgcc aaacaccagc acgttgccga cgccatcgac gcggctcagc
     1921 acatccttca cgtagagcgt ggcgtagttg gagatgtatt gctggtcgcg gctgccgtcg
     1981 ggcgaggtca tgtgcacgac catcatcagg tcgggcgagg ccttgcgcac cacgacgccc
     2041 agccgctgca cgtcctgcgg caggcgtggc tgggccacct ggacgcggtt ctgcacgttg
     2101 acctgcgcct ggtcgatgtc gacgccgggc ttgaacacga cgttgatcga cagccggccg
     2161 tcgccggtcg attgcgagtt gatgtagagc atgtcgtcga cgccgttgat ctcgagctcg
     2221 agcggcgtcg cgacggtggc ggcgatgacc tcggccgagg cgccagggta ggtcgcggtg
     2281 acgttgacgg tgggcggggc gatctcggga tattccgcga tcggcaggtt acgctgggcg
     2341 atggcgccca cgatcaggat gatgatcgac aggaccgaag caaagatcgg ccggtcgatg
     2401 aagaagtggg aaaaacgcat gggctgatgt cgcgtgagga ggggcgctta cttggctttg
     2461 gcggtggtga tctcaccctt ttgcggcacg accttggcgc ccgaccgcac catcgggttg
     2521 gcgagcccgt ccagcaccac cttgtcggtg gccgcgaggc catcgcgcac gaccctcagc
     2581 ccatcgacga tcgggcccag ggtcacaggc ttggccttga ccacattgtc ttcgccgacc
     2641 gtaaacacga tcttgcgcga ctggtcggag accaccgcgg tatcggggat catgagcgcg
     2701 tcgtactcgc cgccaaagag ttgcacgcgg ccgaagatgc cgggcgccag aagctgggtc
     2761 ttgttgtcga cgatggcgcg ggtacggatg gtgcccgagc gcggggcaaa cgtgttgtcg
     2821 acgaagtcga cccggccggt acgcgtccac tcagtctcgt cggccagccg gatgcgcacg
     2881 ggattctttt cccgcgacga gacgagctcg cccgacagga agaggcgcgt gtagcgcagg
     2941 tagtcggtct ccgacacgtc gaacacgaag cggatcggat cgagggtgac gatggtcgcg
     3001 agcatcgtgg cgccctgctg gccgccctgg atcaggttgc cggcatcgac cttgcgatcg
     3061 gagatgcggc cggccagcgg cgcgcgcacg tcggtccagt cgaggttgag ctcggccgag
     3121 cgcaggcccg cctccgccgc cttgagctgg gcgcgcgcca cgtcgaggtt ggccttgcgc
     3181 tggtcgtttt cctgttcggt gatggtcctg gaggtgatca gcgaggcgcc gcgttggacc
     3241 tgcagctcgg ccaggccgac ctgcgccttg ttgcgggcga cctcggcctt ggcgctttcg
     3301 acggcgatct cgtaaggccg cttgtcgatg gtgaacagcg gatcgccgac actgacgagc
     3361 tggccgtcct tgaagtgcag ctgctcgatg aagcccgaga cgcgggcgcg cacctcgacc
     3421 gaggcgaccg cctcgaagcg gccggaaaat tcgtcccact gggtgacgcg cttggcgatc
     3481 ggcggagcaa catcgaccgg catggcgggc ggaccgcctt ggccgaaaac caccgatgag
     3541 gggaacagga cagcaacgcc agcaagggcc agcagacggc ggcgaacaga tgacaaggat
     3601 tttcccccgc gaacagtttt gcggcgcggc acatgtggta gtgcaatgcg tcagtgtcaa
     3661 ttgtcggggc ggtaactgct cccttggatc aattgaatct gtcggtgccg gcatgaatca
     3721 tttgttgcag gcgtcggagg accgcgctag cagtggcggc agtctttgaa gggggatgtc
     3781 caatgaccat catcaagcga atcctcgcgg ccagcgccgt tgtgggcgcc atcgcgtgct
     3841 gggcggctgc cgcctcggct caatcgaccc tcgataccgt caagaagcgc ggccagctga
     3901 tctgcggcgt caatgtcgga ttgggcggct tctcgctcgc cgacagccag ggcaaatggt
     3961 cgggcctcga catcgacatg tgcaacgccg tcgccgccgc cgtgctgggc gatgcgacca
     4021 aggccaagta cgtgccgctc tccgcccagc agcgcttcct cgccttgcag tccggcgaga
     4081 tcgacatgct ggtgcgcaac tccaccatca ccctcgagcg cgatgccggg ctcggcctgc
     4141 aatatgccgg cgtcaatttc tatgacgggc agggcttcat ggtggccaag aagctcaacg
     4201 tgaagagcct tgccgagctg gccagcgcca ccatctgcgt cgcccagggc acgacccatg
     4261 aattcaacat ggcgagctgg ttccgcggcc gcaacctcac caccaaggcg gtggtcttcg
     4321 agagcgtcga catcatgtac gaggcgttct tcggcggccg ctgcgatgcc atcacccagg
     4381 attcctcggc gcttgcctcg gcgctggcga cgcgcggccg gcagggcgac tacatgatcc
     4441 tgcccgagct gatctccaag gagccgctgg ggccgttcgt gcgccgcggc gacgatgtgt
     4501 ggctggcggt cgtgcgctgg tcgctgtttg ccatgctgga agccgaggag cgcgccatca
     4561 ccaaggccaa tgtcgacgag cagctcaaat cgaccgacgc gctggtgcag cgcttcctgg
     4621 gcgccaagcc gggcaacggc aaggcgctgc agctcgacga ggcgtgggcc tacaacatcg
     4681 tcaagcaggt cgggaactat ggcgagagct acgagcgcaa tgtcggcgtg ggcagcccgc
     4741 tcaagcttgc gcgcggcctc aatggcctgt ggaccaaggg cgggctgatg tatccgctgc
     4801 cgctgcgctg acatcggcat ggatagaggc ccgctcaacg cctcgatcgt cgaggcgttc
     4861 gacatcctgc cgccgcagct ccagacggcg gcgcgctaca tgctcgaccg tcccgacgac
     4921 gtggcgctct tgtccatgcg cgagcaggcg cgccgcgccg gcgtgccgcc cgccaccatg
     4981 acccggctcg cccagcgcct gggcctcgag ggctacgacc aggtgcgcga gctctatgcc
     5041 ggcgcggtgc gcgccggcac gctgggcttc gccggcaagg cgggcgccca ggtcgaggcg
     5101 cagaagctgc gcggcgagcg cgccttggcg tcggacatgg cgctcacgct gtcgcgccag
     5161 atcgcagcac ttgccgagcc tgaatcgctc gaacgcctgg ccgacgcggc cggccgcctg
     5221 cacgaagcgc agcgcgtcta ttgcctgggg ctgcgctcct gccacgccgc cgcctggcac
     5281 ttccactaca tgctgtcgct tttgggcgac aagacggtga tgctggacga tgccggcggc
     5341 accggtctcg acgccatccg cgacgccggg ccaggcgatg tggtactggc cgccagcgtc
     5401 gagccctatg cccgcgcgac catcgaaggg gcacagtatg cggccgcccg tggcgtgccg
     5461 gtggtggcgt tgaccgattc ggaagtctcg ccgctcgccc gcgttgccgg cgcggcgatc
     5521 ctggtggcga ccgaaagccc gtctttcttc cacaccatga cgccgctgct ggccgtggcc
     5581 gagatcctcg ccgccctggt cgccggccgc ggtggcaaca aggcgctggc cgcgctggag
     5641 cacaccgagg cgcagctttc ggcgttcggc gtccacctgc cgcgtcgtgg cgccaaggaa
     5701 gcggggcgcg caaaagcatg acccacatcc tgcatcgcca gatcgccggc acgcttccgg
     5761 tcgcggccgg cggccgcggc atcgagatcg tcgacacggc cggcaagcgc tacatcgacg
     5821 cctcgggcgg cgccgcggtg tcctgcctgg gccacggcca tcccgcggtg accgctgcgc
     5881 tgcatgagca gctcgacaag ctcgcctacg cccataccgg ctttttcacc accgaggttg
     5941 ccgagaggct cgccgaccgc ttgatcgccg acgcgcctgc cggcatcagc catgcttacc
     6001 tggtgagcgg cggatcggaa gcgatcgagg ccgcgctgaa aatggcgcgg cagtatttca
     6061 tcgagcgcgg ccagcccgag cgccgccacg tcattgcgcg gcgccagagc tatcacggca
     6121 atacgctggg cgcgctggcg gccggcggca acgaatggcg gcgcgcgccc ttctcgccac
     6181 tgctcatcga gacgcatcat atcgatccct gcttcgccta tcgcttccag gagccgggcg
     6241 agacggagga agcctacgcc gaacgtgccg ccggagcgct cgaggccaag atccacgatc
     6301 tcggccccga cacggtgatg gccttcgtcg ccgagaccgt ggtcggcgct accgcgggtg
     6361 cggtgccgcc ggccaagggc tatttcaggc gcatccggga gatctgcgac cgtca
//
LOCUS       DASWGA010000690         5756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_966904, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000690 DASWGA010000000
VERSION     DASWGA010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5756
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966904"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..570
                     /locus_tag="VF991_16095"
     CDS             121..570
                     /locus_tag="VF991_16095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007561510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9558017.1"
                     /translation="MRITRRHLAAAGALALAAASLPLATHAESADDAAVKKAVDDLTK
                     AMMAADKAKLEALVSDQLSYGHSSGKVETKAEYVGVIAGKKTIYKSITLSEPTVSVAG
                     NNAIARHIFAAEVEAGGQASSPKIGVMQVWVKDGGAWKLLARQAFKL"
     gene            645..1064
                     /locus_tag="VF991_16100"
     CDS             645..1064
                     /locus_tag="VF991_16100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 domain-containing protein"
                     /protein_id="HEX9558018.1"
                     /translation="MAFAGINFLAILIAAVAGFAFGAAYYMTLSRPWLAAIGKTKEEL
                     AAAGKGSPVPFIVSIIALAIMAWTLAGIMGHLGAGQVTVKNGIISALFVWLGFVITTQ
                     SVNYAFGQRKPMLTVIDGIHWLGVLVIQGAIIGAMGV"
     gene            1076..1642
                     /locus_tag="VF991_16105"
     CDS             1076..1642
                     /locus_tag="VF991_16105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEX9558019.1"
                     /translation="MTTGRPRIEGYAIVSREGMIAKSDGSFPEELKIPADQQFYQGSL
                     ERASAVANGRHSAEGGPKEKARKRIRLTRRVQRIITDPDNPNVVLWNPGTASFEEAWR
                     RLNVEDGILAVVGGTDVFALFLTIGYDAFFLSRALVSIPRGRPVFPGVGNGVPAEEPL
                     KKHGLVLRDTRMLDPVTETVVQEWGPQK"
     gene            1639..1977
                     /locus_tag="VF991_16110"
     CDS             1639..1977
                     /locus_tag="VF991_16110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558020.1"
                     /translation="MSAQAARRPTIARIWRGRVRRERADEYESYNYEVGIKPLIEKAL
                     GVQTFREDREHESEFMTISYWENIPAMSRFTGSDPTRIHHLDRDEEFLIELPKSVQIL
                     RLLKSHGQTG"
     gene            complement(2108..2998)
                     /locus_tag="VF991_16115"
     CDS             complement(2108..2998)
                     /locus_tag="VF991_16115"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9558021.1"
                     /translation="MTIDIQPIDPVNRAFFAGVVSGLDLTRPLSKEEVAAVHAGMDRF
                     GVLVFHDQKIDDDQQLVFSRSLGPLEQATGDIAAPQDRRVSMDLNDISNLDKHEKVLA
                     RDDRRRLFGLGNQLWHSDSSFKPVPAKYSLLSARRIPPAGGNTEFADMRAAYDALDEA
                     TKREAHDLICLHSQIFSRGVLGFTDFTDAEREKWTPVRQRLVRRHPTTGRLSLYLASH
                     AGGIEGWPVPEARAFLRDLTEHATQRKFVYAHVWRPYDLVMWDNRVTMHRARRYDHTE
                     VRDMRRTTLTNEVSSLEQSP"
     gene            3141..3449
                     /locus_tag="VF991_16120"
     CDS             3141..3449
                     /locus_tag="VF991_16120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011347528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9558022.1"
                     /translation="MSRTKKATLSDDHATALADLFRLLGDPTRLRIVVSCLRTPLAVS
                     DIAERLGLSVSLVSHHLRLLKGARLVRADRQGKQVYYGADDAHVRRMVEDMVTHIGEH
                     "
     gene            3451..4092
                     /locus_tag="VF991_16125"
     CDS             3451..4092
                     /locus_tag="VF991_16125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEX9558023.1"
                     /translation="MSAHCHDHGHEHAATAASPAYRRVLWVALAVNLAMFCVEIGAGL
                     AAQSVSLLADSLDFLGDAGNYGISLFVLGMALQWRARASLLKAASMGAFGAWVAVTTV
                     QHAIAGTVPAAPVMGMVGALAFAANLGVAALLYRWREGDSNMRSVWICTRNDAIGNLA
                     VLAAAAGVLGSGTGWPDYLVAAVMSGLALVGAFQVARQAMAELADTAKLSSRA"
     gene            complement(4158..5756)
                     /locus_tag="VF991_16130"
     CDS             complement(4158..5756)
                     /locus_tag="VF991_16130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase"
                     /protein_id="HEX9558024.1"
                     /translation="MSQIIDFAATYYPDVEIVSRTVEGPIHRYGYRAAAKRAKQLAEA
                     LQGLGIKLGDRVGTIAWNTHRHFELYFGISGIGAVLHTINPRLAPEHVAYIANHAEDQ
                     VIFVDLNLLPVVEGVWQHLKTVKHVVVMTDRGHMPASSKIPKLLCYEELIAGKPGTLQ
                     WPDFDERTASSLCYTSGTTGNPKGVLYSHRSTVIHSMMMCSGPVLALNPDTTILPVVP
                     MFHANAWGLVYAGPICGAKLVFPGPKLDGASIYELLDKEQVTMSAGVPTVWLALLEYC
                     TQNKLKMSSVKRTLIGGSAVPLAMIERFWKEHGIEVAQGWGMTEMSPLGTITRFNKGE
                     HGLPDAGRFAITAKQGRPVFGCEMKIIDDAGNDLPQDGSVSGNMVVRGSWIVKGYMKG
                     DGKSQFLEDDWFQTGDVCKIEADGSVVITDRSKDVIKSGGEWISSIDLENAAMGCPGV
                     AEAAVIGVHHPKWDERPLLIVVRRPEADVTKGDVLKFLEGKIAKWWMPDDVQFTDAIP
                     HGATGKILKTALRKQFESYKLPTA"
BASE COUNT          979 a         1808 c         1949 g         1020 t
ORIGIN      
        1 aaaaagaaat catgaggcca tgcgcaacag tacctcagtc tggagtaagc tgccggacgg
       61 tcggaagcgt tggtcgccgg ccacaatgcc gacaacaatc gaacaaggga gtgaaccaag
      121 atgcgtatca ctcgtcgtca cttggccgcc gccggcgcgc ttgcgctcgc cgccgcctct
      181 ctgcctttgg ccacccatgc cgaatccgcc gatgacgcgg ctgtaaagaa agcggtcgat
      241 gatctcacca aggccatgat ggccgccgac aaagccaagc tcgaagcgct ggtctccgac
      301 cagctgagct acgggcattc cagcggcaag gtcgagacca aggccgagta cgtcggcgtc
      361 atcgccggca agaagacgat ctacaagtcg atcacgctca gcgaacccac cgtcagcgtg
      421 gccggcaaca acgccatcgc ccgccacatc tttgccgccg aggtcgaggc gggagggcag
      481 gcgagctcgc cgaagatcgg cgtgatgcag gtctgggtga aggacggcgg cgcctggaag
      541 cttttggcgc ggcaggcgtt caagctctga tcgagcgcct acaagtccaa ggcgatttcc
      601 tcccgggagc acgctaggct ggcgcgaacc ccgggaggag agccatggca ttcgccggca
      661 tcaactttct cgccatcctg atcgcggctg tagcgggctt cgccttcggc gcggcctact
      721 acatgacgct gtcgcggccg tggcttgccg ccatcggcaa gaccaaggag gaactcgccg
      781 ccgcaggcaa gggctcgccg gtgcccttca tcgtttcgat cattgctctt gccatcatgg
      841 cctggacgct ggccggcatc atgggccatc tcggcgcggg gcaggtgacc gtcaagaacg
      901 gcatcatctc ggcgctgttc gtctggctcg gcttcgtcat caccacccaa tcggtcaatt
      961 acgccttcgg ccagcgcaag ccgatgctga cggttatcga tggcattcat tggctgggcg
     1021 tgctggttat acagggcgcc atcatcggcg cgatgggtgt gtgaacgagg cctgaatgac
     1081 gactggacgt ccccgcatag aaggttacgc gatcgtttcg cgcgaaggca tgatcgccaa
     1141 gtccgacggc tcctttcccg aggagctgaa aatcccggcc gaccagcaat tctaccaggg
     1201 gtcgctggag cgggcgtcgg cggtcgccaa tggccggcac tccgccgaag gcggaccgaa
     1261 ggaaaaggcg cgcaagcgca tccgcctgac gcggcgggtc cagcggatca tcaccgatcc
     1321 cgacaatccc aatgtcgtgc tgtggaaccc cggcaccgcg tcgttcgagg aggcgtggcg
     1381 gcggctcaat gtcgaggacg gcatcctggc ggtggtgggc ggcaccgacg tgttcgccct
     1441 gttcctgacc atcggctacg atgcgttttt cctgtcgcgc gcgctcgtca gcattccgcg
     1501 cggccggccg gtctttcccg gcgtcggcaa cggcgtgccg gccgaggagc cgctcaagaa
     1561 gcacggtttg gtgctgcgcg acacgcgcat gctcgatccc gtgactgaga ccgtcgtgca
     1621 ggaatggggg ccgcagaagt gagcgcgcag gcggccaggc ggccgacgat cgcgcggatt
     1681 tggcgcggcc gcgtgcggcg ggagcgggcg gacgagtacg aatcctacaa ctacgaggtc
     1741 gggatcaaac cgttgatcga gaaggctctg ggcgtgcaga ccttccggga ggaccgcgag
     1801 cacgaaagcg agttcatgac gatctcctac tgggagaaca tcccggcgat gtcgcgcttc
     1861 accggaagcg atccgacgcg catccatcac ctcgaccgcg acgaggagtt tctgatcgag
     1921 ctgccgaaat ccgtgcagat cctgcggctc ctcaagagcc acggtcagac gggataaatc
     1981 gacatcaagc gcattcgacg agtctgtcac ctcgagcgaa gcgaggggcc tttaaagcaa
     2041 caggaaaggt ccctcccttc ggcttcgctc agggcaggcg ctacgctcgg gatgacaact
     2101 cgtctgatca cggcgactgc tcgaggctcg atacttcgtt ggtcagcgtg gtgcgccgca
     2161 tgtcgcgcac ttcggtgtga tcgtagcgcc gggcgcgatg catggtgacg cggttgtccc
     2221 acatcacgag atcgtacggc cgccagacat gggcatagac gaacttccgc tgcgtggcgt
     2281 gctcggtgag gtcgcgcagg aaggcgcgcg cctcgggcac cggccagccc tcgatgccgc
     2341 cggcgtggct ggcgagatag agcgacagcc ggccggtcgt gggatggcgg cgcaccaggc
     2401 gctggcgcac cggcgtccat ttctcgcgct cggcatcggt gaagtcggtg aagccgagaa
     2461 cgccgcggga aaagatctgg ctgtgaagac agatgaggtc gtgcgcctcg cgcttggtcg
     2521 cctcgtcaag ggcatcgtag gccgcgcgca tatcggcgaa ctcggtattg ccgccggccg
     2581 gcgggatgcg gcgcgccgac aacagcgaat acttggccgg caccggcttg aacgagctgt
     2641 cggagtgcca gagctggttg cccaggccga acaggcggcg gcggtcgtca cgcgccagca
     2701 ccttctcgtg cttgtcgaga ttggagatgt cgttcaggtc catgctgacg cgccggtcct
     2761 gaggtgctgc gatgtcgccg gtcgcctgct cgagcgggcc caggctgcgg ctgaagacga
     2821 gctgctggtc gtcgtctatc ttctggtcgt ggaacaccag cacgccgaag cggtccatgc
     2881 cggcatgaac ggccgcgacc tcttccttgg atagcggacg ggtgaggtcg aggcctgaca
     2941 cgacgccggc gaagaaggcg cggttcacgg gatcaatggg ttggatgtcg atggtcatgg
     3001 tggggacagc ctagcgccat tggcggcgaa cggcgaggcg gatccattgc attttggcag
     3061 ccttgcccgg catgcagcac aaccatccgg gcgccggttg acaagacggt ccggcatgat
     3121 acacttgaac agttgttcaa atgtccagaa ccaagaaagc caccctgtcc gacgaccacg
     3181 ccacggcgct ggccgacctg tttcgcctgc tgggtgatcc gacccggctc aggatcgtgg
     3241 tgtcctgcct caggacgccg cttgccgtat ccgacatcgc cgagcggctc ggcctctcgg
     3301 tgtcgctggt cagccaccat ctgcgcctgc tgaaaggagc gcggctggtg cgggcggatc
     3361 gccagggaaa gcaggtgtac tacggcgcgg acgacgccca tgtgcgccgc atggtcgagg
     3421 acatggtcac ccatatcggg gagcattgag atgagcgccc attgccatga tcacggccac
     3481 gagcatgccg cgaccgcggc ctcgccggcc tatcggcgag tgctgtgggt ggcgctggcg
     3541 gtcaaccttg ccatgttctg cgtcgagatt ggcgccgggc tcgccgcaca atcggtgtcg
     3601 ctgctggccg attcgctcga ctttctgggc gatgccggca actacggcat cagcctgttc
     3661 gtgctgggca tggcgctgca gtggcgcgcc cgcgcttcgc tgctgaaggc cgccagcatg
     3721 ggcgccttcg gcgcgtgggt tgccgtcacc accgtccagc atgccatcgc cggcacggtg
     3781 cccgcggcgc cggtgatggg catggtcggc gcgctcgcct tcgccgccaa tctcggcgtg
     3841 gcagcgttgc tctatcgctg gcgcgagggc gacagcaaca tgcgctcggt gtggatctgc
     3901 acgcgcaacg acgcgatcgg caacctcgcg gtgctggccg ccgcggcggg cgtgcttggc
     3961 tcgggcaccg gctggcccga ctacctcgtc gccgccgtca tgtcgggcct ggcgctggtc
     4021 ggtgccttcc aggtggcgcg ccaggcgatg gcggaattgg cagatacggc aaagctgtca
     4081 tcccgagcgt aagcgaggga tctttcctgt ggccttaaag gtccttcggc cttcggcctc
     4141 gggatgacaa cggcgcctta ggccgtcggc agcttgtagc tctcgaactg cttgcgcagg
     4201 gcggtcttca ggatcttgcc ggtggcgccg tgcgggatgg cgtcggtgaa ctgcacgtcg
     4261 tcgggcatcc accatttggc gatcttgccc tcgaggaatt tcagcacgtc gcctttggtg
     4321 acgtcggctt cgggccggcg caccacgatc aggagcggcc gctcgtccca tttgggatga
     4381 tggacgccga tcacggccgc ttcggccacg ccgggacaac ccatggcggc gttctccaga
     4441 tcgatcgagc tgatccattc gccgcccgat ttgatgacgt ccttggagcg gtcggtgatg
     4501 accaccgaac catccgcctc gatcttgcag acgtcgccgg tctggaacca gtcgtcctcg
     4561 aggaactggc tcttgccgtc gcccttcatg tagcccttca cgatccacga cccgcgcacc
     4621 accatgttgc ccgagacgct gccgtcctgg ggcaagtcgt tgccggcgtc gtcgatgatc
     4681 ttcatctcgc agccgaacac cggccggccc tgcttggcgg tgatggcgaa acgcccggcg
     4741 tcgggtaggc cgtgctcgcc cttgttgaag cgggtgatgg tgccgagcgg gctcatctcg
     4801 gtcatgcccc agccctgcgc cacctcgatg ccgtgctcct tccagaagcg ctcgatcatg
     4861 gcgagcggca cggccgagcc gccgatcagg gtgcgcttga ccgatgacat tttcagcttg
     4921 ttctgggtgc agtactcgag caacgccagc cacacggtcg gcacgccggc gctcatcgtc
     4981 acctgctcct tgtccagaag ctcgtagatg ctggcgccgt cgagcttagg gccggggaag
     5041 acgagcttgg cgccgcagat cgggccggca tagaccagcc cccaggcatt ggcgtggaac
     5101 atcggcacca ccggcaggat ggtggtgtcg ggattgagcg ccagcaccgg gcccgagcac
     5161 atcatcatcg aatggatgac cgtcgagcgg tgcgaataga gtacgccctt ggggttgccg
     5221 gtcgtgcccg aggtgtagca gagcgacgag gccgtgcgct cgtcgaagtc gggccattgc
     5281 aacgtgccgg gcttgcccgc gatcagctct tcgtagcaca gcagcttggg gatcttggag
     5341 gaggccggca tgtggccgcg gtcggtcatg accacgacat gcttcacggt cttcaggtgc
     5401 tgccacacgc cctcgacgac cggcagcagg ttcaggtcga cgaaaatgac ctgatcctcg
     5461 gcatggttgg cgatgtaggc cacatgctcg ggcgccagcc tcggattgat ggtgtgcagg
     5521 acggcgccga tgccggagat gccgaaatag agctcgaagt ggcggtgggt gttccaggcg
     5581 atggtgccga cccggtcgcc gagcttgatg cccagcccct gcagggcctc ggcgagctgc
     5641 ttggcgcgct tggcagccgc ccggtagccg tagcggtgga tcggcccctc gacggtgcgc
     5701 gagacgatct cgacgtcggg atagtaggtg gcggcaaagt cgatgatctg cgaaat
//
LOCUS       DASWGA010000691         3436 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_839167, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000691 DASWGA010000000
VERSION     DASWGA010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839167"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VF991_16135"
     CDS             complement(<1..437)
                     /locus_tag="VF991_16135"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX9558025.1"
                     /translation="MSEVDGATLIARSLKQQGIDHLFGVVGFPITAIAAAAQKEGVAY
                     LGMRNEQSAAYAAAAYGYLTGRPGACVVVTGPGVVHGLSGLANAQQNCWPMILIGGAS
                     ETYRGGMGAFQEERQVLIASPFCKFAHGIESVQRIPYYVEMATR"
     gene            707..1231
                     /locus_tag="VF991_16140"
     CDS             707..1231
                     /locus_tag="VF991_16140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEX9558026.1"
                     /translation="MAIYQLNDRVPVIPASCYIAPEATIIGSVVLGERVTIMFGAVLR
                     GDDEPIVIGDDSNVQDNAVLHTDPGCPLTIGKGVTIGHQVMLHGCTIGDGALIGVAAI
                     VLNSAVIGKDCLVGAGSVVTEGKSFPERTVIFGSPAKAAREVTEDNILRMRFSAESYV
                     QRGSQYRANLKRIG"
     gene            1236..1955
                     /locus_tag="VF991_16145"
     CDS             1236..1955
                     /locus_tag="VF991_16145"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9558027.1"
                     /translation="MIDAVDHLTLAGSAAIYETLLGRRLVDGRLQTANVGLVFGTGSE
                     PLSSMVFATASLDKMTRLLERRGVATSGYGKLELSPRATHGVPLALVERHAAPAPSPV
                     TVEEAAAISALDHVVIRSPNPERAIAFYAGRLGLDLRLDRSNPEWGTRLLFFRCGDLV
                     VEIAHDSDKGVSDEPDQLWGLSWRTPDIANANARLKAAGIDVSEPRDGRRPGSQVFTV
                     KSGTEGVPTIVIGGTGRWQAR"
     gene            1952..2698
                     /locus_tag="VF991_16150"
     CDS             1952..2698
                     /locus_tag="VF991_16150"
                     /inference="COORDINATES: protein motif:HMM:NF021541.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2272 domain-containing protein"
                     /protein_id="HEX9558028.1"
                     /translation="MMRRAILVLVVLATSCAPAPKPTVKSAAELPPLGSCPASSWKPE
                     APPPTASARISMVLLAVGEWARYGKQVITYSANAPPRTEQLGVKEREAPQRIHDYWAS
                     VGHPERTGLDDVPWSAAFISWDIQSAGVSRDLFCPSQTHTIYVERMALRERQPGAAFI
                     PRRPDERQPQVGDLICASRNGSGTTLDNLNRGAGHCDIVVEVRPGSVAAIGGNVGDSV
                     SRSVFPLDANGFLSPISARPYFTVIENRLP"
     gene            2709..>3436
                     /locus_tag="VF991_16155"
     CDS             2709..>3436
                     /locus_tag="VF991_16155"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9558029.1"
                     /translation="MSWPYDYIIIGAGSAGCAIANRLAEDLALRILVIEAGPPDSSFM
                     LKMPAGFASLGDKTPYNWRYETTPQKHCNDRRMYWPRGRTLGGSSSINAMLYVRGHAS
                     DYDHWRQLGNEGWSYGDVLPFFKKAEHNERGPNPFHGVDGPLNVADQADPSPLNEAFL
                     HASGEAGHKRIDDFNGPEQEGVGYYQVTQKDRQRWSAASAYLRPAVERNRNNVHVITD
                     ALVERIILDKTRAMGVRYCQKDGR"
BASE COUNT          580 a         1205 c         1108 g          543 t
ORIGIN      
        1 cgggttgcca tctcgacata gtaggggatg cgctgcacgc tctcgatgcc gtgcgcgaac
       61 ttgcagaacg gcgaggcgat cagcacctgc cgctcttcct ggaacgcacc catgccgccg
      121 cgataggtct ccgaggcacc gccgatcagg atcatgggcc agcaattctg ctgggcattg
      181 gcgagacccg agagaccgtg cactacgccg gggccggtca cgacgacgca ggcgccggga
      241 cggccggtga gatagccgta ggccgccgcc gcgtaggcgg cgctctgctc gttgcgcatg
      301 ccgaggtagg cgacgccttc cttctgcgcg gccgcggcga tcgcggtgat cggaaacccg
      361 acgaccccga acaggtgatc gatgccctgc tgtttgaggc tcctcgcgat cagggtagcg
      421 ccgtcgactt cgctcatgtt ttccccctcg tgaccgaatg aacttcggcc gcgagattat
      481 gtgcattgat ggcagggtcg cgaaagggcc ctactttccg atgtgcgata cggccgagcc
      541 atgcggcccc gtgcgttcgg gcgctattgg gccccctacg acatgccaag ggccgccaac
      601 gaaggccact tctggcccgg gagcggacat ccttgctgga tcgaatagag tgcgttttat
      661 gggttcacga cccaagcaat ccccctcgca accccaagga agcccgatgg caatctatca
      721 gttgaacgac cgcgtcccgg tgatccccgc ctcctgctac atcgcccccg aagcgacgat
      781 catcggctcc gtcgtccttg gcgagcgcgt caccatcatg ttcggcgccg tgctgcgcgg
      841 cgacgacgag ccgatcgtga tcggcgacga cagcaacgtg caggacaacg ccgtgctgca
      901 caccgacccc ggctgcccgc tcaccatcgg caagggcgtg accatcggcc atcaggtcat
      961 gctgcacggc tgcacgatcg gcgacggcgc gctgatcggc gtggcggcaa tcgtgctgaa
     1021 cagcgccgtg atcggcaagg attgcctggt cggcgccggc tcggtggtga ccgagggcaa
     1081 gagcttcccc gagcgcaccg tgatcttcgg ctcgccggcg aaggctgcgc gcgaggtcac
     1141 cgaggacaac atcttgcgca tgcggttttc cgccgagagc tatgtgcagc gcggcagcca
     1201 gtacagggcg aacctcaagc gtatcggcta gcggcgtgat cgacgcggtc gatcatctga
     1261 cgctcgcggg ctctgccgcc atctacgaga cgctgctcgg ccggcgcctc gtcgacggcc
     1321 ggttgcagac ggccaacgtc gggctggtct tcggaacggg aagcgagccc ctgtcctcga
     1381 tggtgttcgc cacggcctcg ctcgacaaga tgacaaggct gctcgagcgc cgcggcgtcg
     1441 cgacgagcgg gtacggcaag ctcgagcttt cgccccgggc cacgcatggc gtgcccctcg
     1501 ccctcgtcga gcgccatgcc gcgcccgcgc cttcgccggt cacggtcgag gaggccgcgg
     1561 cgatttccgc cctcgaccat gtcgtgatcc gatcgcccaa ccccgagcgc gccatcgcct
     1621 tttacgccgg gcgcctggga ctcgatcttc ggctcgaccg cagcaatccc gaatggggca
     1681 cgcggttgct gttcttccgc tgcggcgatc tcgtggtcga gatcgcacac gactcggaca
     1741 agggcgtctc ggatgagccg gaccaattgt ggggcttgag ctggcgcacg cccgacatcg
     1801 ccaatgccaa cgcgcgcctg aaggcggccg gcatcgatgt ctccgaaccg cgcgacggtc
     1861 ggcggccggg cagccaggtc ttcaccgtga agagcggcac cgaaggcgtg ccgaccatcg
     1921 tgatcggcgg caccgggcgc tggcaggctc gatgatgcgg cgcgccatcc tcgttcttgt
     1981 tgttctcgca acctcctgcg cgccggcccc caagcccacc gtcaagagcg cggccgagct
     2041 gccgccgctc ggttcctgcc cggcttcgtc gtggaagccc gaggcgccgc cgccgaccgc
     2101 cagcgccagg atttcgatgg tgctgctggc ggtcggtgaa tgggcgcgct acggcaagca
     2161 ggtcatcacg tactccgcca atgctccgcc gcgcaccgag cagctcggcg tcaaggagcg
     2221 cgaggcgccg cagcgcatcc acgactactg ggcgagcgtc ggccatcccg agcgcaccgg
     2281 cctcgacgac gtgccgtggt cggcggcctt catctcctgg gacatccaga gtgcaggcgt
     2341 ctctcgcgac ctcttttgcc ccagtcaaac ccacacgatc tatgtcgagc gcatggccct
     2401 gcgcgagcgc cagcccggcg ccgccttcat cccccgccga cctgacgaga ggcagcccca
     2461 ggtcggcgac ctgatctgcg cctcgcgcaa cggcagcggc accaccctgg acaacctcaa
     2521 ccgcggcgcc ggacattgcg acatcgtggt cgaggttcgg cccggcagcg tggccgccat
     2581 cggcggcaat gtcggcgact cggtcagccg cagcgtcttt ccactggacg ccaacgggtt
     2641 tttgtcgccc atatccgctc gcccgtattt cacggtgatc gagaacagac tgccctagga
     2701 agagcgagat gtcctggccg tacgactaca tcatcatcgg cgccggatcg gccggttgtg
     2761 cgatcgccaa ccgcctggcc gaagatctgg cgctgcgcat cctggtcatc gaagcgggtc
     2821 cgccggacag ctccttcatg ctgaaaatgc ccgcgggctt cgccagcctg ggcgacaaga
     2881 caccctacaa ctggcgttac gagacgacgc cgcaaaagca ctgcaacgac aggcgcatgt
     2941 actggccacg cggccggacg ctgggcggct cgtcgtcgat caacgccatg ctctatgtcc
     3001 gcggccacgc ctcggactac gaccactggc gccagctcgg caacgagggc tggagctacg
     3061 gcgacgtgct gcccttcttc aagaaggccg agcacaacga gcgcgggccc aacccattcc
     3121 acggcgtcga cgggccgctg aacgtcgccg accaggccga ccccagcccg ctgaacgagg
     3181 ccttcctgca tgcctccggc gaggcgggcc acaagcggat cgacgacttc aacggtcccg
     3241 agcaggaagg cgtcggctat taccaggtga cgcagaagga ccggcagcgc tggagcgccg
     3301 ccagcgccta tctgcggccg gcggtcgagc gcaaccgcaa caacgttcac gtcatcaccg
     3361 acgcgctggt cgagcgcatc atcctcgaca agacccgcgc catgggtgtg cgctattgcc
     3421 agaaggacgg ccgcga
//
LOCUS       DASWGA010000692         3108 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1221967, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000692 DASWGA010000000
VERSION     DASWGA010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3108
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221967"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="VF991_16160"
     CDS             complement(<1..315)
                     /locus_tag="VF991_16160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008872413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline racemase family protein"
                     /protein_id="HEX9558030.1"
                     /translation="MILSTVEMHTGGEPTRIVVDGWPKFSGKTLLDKRREARERFDHL
                     RRGLMLEPRGHDGMYGALLVEPDHPEADLAVLFMHNEGFSTMCGHATIALGGRQRAHG
                     KAR"
     gene            complement(312..1460)
                     /locus_tag="VF991_16165"
     CDS             complement(312..1460)
                     /locus_tag="VF991_16165"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9558031.1"
                     /translation="MLDEILTPEERAVVARARDFAERYVAPNAARWEWERRYPLEAIK
                     AACAEGLHTIELARKHGGQGLSFSCKLRAFEEIAKHDFAFAFALINHHNAVARFARDG
                     QPAQVARLLPRMIAGEVIGCAGLSEPGVGSDFGGLEMSAVKVEGGWKLNGAKAWITNA
                     AVAGLSVAYAQTDKAQGYRGIACFAIEADRPGFHRDKPFALHGGHAIGVGGFWLVDYV
                     APDEAVLQPPGQAFKAALAGINGARAYVAAMCCGMLQASLETAVRYTRERKTFGQPVL
                     DHQGVRWKLVDAATDLEAARLLTYRAARLIDEGGDAVLPAAYAKKFATEMALRRIADC
                     IQAMGANGLRAEYPLARHLACAKIAAYTDGSIEMMNERIGVGLPQVFG"
     gene            1501..1821
                     /locus_tag="VF991_16170"
     CDS             1501..1821
                     /locus_tag="VF991_16170"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9558032.1"
                     /translation="MDRTPNPISLAAARGLPWKPGRSAEAFLDGDLEIRFTPRPTNGP
                     QTPHQRDEVYIVAAGSGFYRIEDRITAVGPGDLCFAAAHVIHGFENFSDDFAIWIIFY
                     GPMK"
     gene            1874..1948
                     /locus_tag="VF991_16175"
     tRNA            1874..1948
                     /locus_tag="VF991_16175"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1906..1908,aa:Gly,seq:ccc)
     gene            1973..>3108
                     /locus_tag="VF991_16180"
     CDS             1973..>3108
                     /locus_tag="VF991_16180"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9558033.1"
                     /translation="MDSVVSAPIAASGDFLADAAAFSAYWRGAKQQLARLPVKPKRDA
                     ATADAAESLKQAAREARFVFLRRHAPTLYDRLTDGRRKFVRVERLAYDAAELVPGLVP
                     TRAEVAAEAELRQAEKDGCEIDQGILFNQFLAEPECGLHLCHAMLLPREESPDALAKF
                     LRDGRLDLGFARVERQGKAAVLLLANKRFLNSEDASTQPATEIAADVCILDPQSQVAV
                     LRGDVVPDGKYAGRRVYNAGINLTHLYYGKIPFLWFLIRDLGFVNKMFRGLARPDVTP
                     DEVSGDSIEKLWISAVETFAIGGGCQILLATDFNIAGREAYLTLPARKEGIIPAMANL
                     RLARFVGDRIARQAIMYERRIDCDSEVGRMICDEVIDPAAMDQT"
BASE COUNT          514 a         1056 c         1004 g          534 t
ORIGIN      
        1 tcgcgccttg ccatgcgccc gctgtcgacc gcccagcgcg atggtggcgt ggccgcacat
       61 ggtactgaat ccctcgttgt gcatgaacag cacggcgagg tcggcttcgg gatggtcggg
      121 ctcgaccagc agcgcgccgt acatgccgtc atggccgcgc ggttccagca tcaggccgcg
      181 ccgcaaatgg tcgaagcgtt cgcgtgcctc gcgccttttg tccaaaagcg tcttacctga
      241 aaacttcggc cagccgtcga cgacgatgcg cgtgggctcg ccgccggtgt gcatctcgac
      301 ggtcgacagg atcacccgaa cacctgcggc aggccgacgc cgatgcgctc gttcatcatc
      361 tcgatcgagc cgtcggtgta ggcggcgatc ttggcgcagg cgagatggcg cgctagcgga
      421 tactcggcgc gcagcccgtt ggcgcccatt gcctggatgc agtctgcgat gcgcctgagc
      481 gccatctcgg tcgcgaattt tttcgcatag gccgcgggca gcacggcatc gccgccttcg
      541 tcgatcaatc gcgccgcgcg ataggtgagc aggcgcgcgg cttccaggtc ggtggcggcg
      601 tcgaccagct tccagcgcac gccctggtga tcgagcaccg gctggccgaa agtcttgcgc
      661 tcgcgcgtgt agcgcaccgc ggtctcgagc gaggcctgca gcatgccgca gcacatggcg
      721 gcgacatagg cgcgtgcacc gttgatgccg gccagcgccg ccttgaaggc ctggcccggc
      781 ggctgcagaa cggcctcgtc cggcgcgacg tagtcgacca gccaaaagcc gccgacgccg
      841 atcgcatgcc cgccatgcag cgcgaacggc ttgtcgcgat gaaagcccgg tcggtccgct
      901 tcgatggcga aacaggcgat gccgcgatag ccctgggcct tgtcggtctg ggcataggcg
      961 accgagaggc cagccaccgc ggcgttggtt atccaggcct tggcgccatt cagcttccag
     1021 ccgccctcga ccttcaccgc cgacatttcc aggccgccga agtcgctgcc caccccgggc
     1081 tcgctcaagc ccgcacagcc gatcacctcg cccgcgatca tgcgcggcag caggcgcgcg
     1141 acctgcgccg gctggccgtc gcgggcaaac cgcgcgaccg cgttgtggtg attgatcagg
     1201 gcgaaggcga aggcgaagtc gtgtttggca atctcctcga aggcgcgcag cttgcaagag
     1261 aaggagagtc cttgcccgcc gtgcttcctt gcgagctcga tggtgtgcag gccctcggca
     1321 caggcggcct tgatggcctc cagcggatag cgccgctccc attcccagcg cgcggcattg
     1381 ggcgcgacgt accgttcggc gaaatcgcgg gcgcgcgcca cgacggcgcg ttcctcgggc
     1441 gttaggatct catccagcat cggctagtct cgcacggttc gggcaaatct ggaggtctcc
     1501 atggatcgca cacccaaccc gatatcgctc gccgccgccc gtgggcttcc gtggaagccg
     1561 ggacgatcag ccgaggcatt tttagacggc gacctggaaa tcagatttac accccggccg
     1621 accaatggac cacaaacgcc gcaccagcgc gacgaggtct atatcgtcgc cgcaggcagc
     1681 ggcttttatc gaatcgaaga ccgcattacg gcggtcggac cgggcgatct ctgttttgcg
     1741 gcagcgcatg taatccatgg gttcgagaat ttctcggatg atttcgcgat ctggatcata
     1801 ttctacggcc caatgaaatg accgccacac gattggacct ccggcgcagc cgcaggctag
     1861 aatgcgatcc caagcgggtg tagctcaggg gtagagcgtc ggcttcccaa gccgtaggtc
     1921 gcgggttcaa atcccgtcgc ccgctccaat tttttcggac aggaacgagg tcatggattc
     1981 ggtggtatcg gcgccgatcg cggccagcgg cgacttttta gccgatgcgg ccgccttttc
     2041 cgcctattgg cgcggggcca agcaacagct cgcccgcttg ccggtcaagc caaagcgcga
     2101 tgcggcaacc gccgatgccg ccgagtcgct gaagcaggcg gcgcgtgagg cgcgcttcgt
     2161 cttcctgcgc cgccatgcgc cgacgctcta cgaccggctg accgacgggc ggcgcaagtt
     2221 cgtcagggtc gagcgcctgg cctacgacgc ggccgagctg gtgcctggcc tggtgccgac
     2281 acgtgccgag gtcgccgccg aagccgagct gcgtcaggcc gagaaggacg gctgcgagat
     2341 cgaccaaggt atcctgttca accagttcct ggccgagccc gagtgcggcc tgcatctctg
     2401 ccacgccatg ctcctgccgc gcgaggaatc gcccgacgcg ctggccaagt ttttacgcga
     2461 cggccggctc gatctcggct tcgcccgcgt cgagcgccag ggcaaggccg ccgtcctgct
     2521 gctggccaac aaacgcttcc tcaattcgga ggatgcctcg acccagcctg cgaccgagat
     2581 cgccgccgac gtctgcatcc tcgatccgca aagccaggtc gcggtgctgc gtggcgacgt
     2641 ggtgcccgac ggcaagtatg ccggccgccg cgtctacaat gccggcatca acctcacgca
     2701 cctctactac ggcaagatcc cgttcctgtg gttcctgatc cgcgacctgg gtttcgtgaa
     2761 caagatgttc cgcggcctgg cgcggcccga cgtgacgccc gacgaggtct cgggcgattc
     2821 gatcgaaaag ctctggatct cggcggtcga gaccttcgcg atcggcggcg gctgccagat
     2881 ccttttggcg accgacttca acatcgccgg acgcgaggcc tatctcaccc tgccggcgcg
     2941 caaggagggc atcatcccgg ccatggccaa cctcaggctg gcccgcttcg tcggcgatcg
     3001 cattgcccgc caggcgatca tgtacgagcg ccgcatcgac tgcgattcgg aggtcggccg
     3061 catgatctgc gacgaggtca tcgatccggc cgccatggac cagacgat
//
LOCUS       DASWGA010000693         2053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_839453, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000693 DASWGA010000000
VERSION     DASWGA010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839453"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VF991_16185"
     CDS             complement(<1..254)
                     /locus_tag="VF991_16185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HEX9558034.1"
                     /translation="MGDQKPAGRTPDEIEAARKLFAGACDFVAGAASLDSLPAIALPE
                     VAFAGRSNVGKSSLVNALTGRRTLARVSSSPGRTRQINFF"
     gene            complement(254..>2053)
                     /gene="yidC"
                     /locus_tag="VF991_16190"
     CDS             complement(254..>2053)
                     /gene="yidC"
                     /locus_tag="VF991_16190"
                     /inference="COORDINATES: protein motif:HMM:NF002353.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEX9558035.1"
                     /translation="YAFPPTKPPVNTTTQQQTTTPGTTGTPQAPSGQPVAPGAQPATA
                     AAPQIVSRKEALARSPRVTFDTPELTGSISLKGARIDDVRLVKYRETIDPKSDPVPVL
                     SPVGTEHPYYAEFGWSASDPNVKLPGPDTMWTAGNPSVAPGKPVRLTWDNGQGLTFAL
                     DVALDEFFMFDVRQSVENKSDKPVTVFPWSLVVRYGQPAAEGIYILHEGPYGVFNGSL
                     KEFSYSDFKDNKPPQKISTTGGWVGITDKYWMATLVPDQQSKVDVSIKSTGSGADLKY
                     QIDYVAPGKEIAPGATAATDARLFAGAKIVKLIDAYEKKYSIEKFDLTIDWGWFWFFT
                     KPLFWLLEWLYGQLGNFGVAILALTVLVKAVFFPLANKSYAAMSKMKALQPEMEKLKE
                     RYGEDRQRMNQELMQLYRREKVNPAAGCLPIVVQIPVFFALYKVLYTTIEMRHQPFFG
                     WIKDLSAPDPLTVLTGFGLFHWQVPEFLHFFNIGLWPLIMGVTMYMQQKLNPAPTDPV
                     QARVFQFLPILFTFMLGSFAAGLVIYWAWSNTLSIAQQYTIMRRHGVPIGGGKAKPAV
                     AAALPAPAPTDGGGGGSGSGGGKKGGKGAAKKR"
BASE COUNT          318 a          675 c          697 g          363 t
ORIGIN      
        1 tcgaagaaat tgatctgccg cgtgcggccg gggctggacg acacgcgggc cagcgtgcgg
       61 cggccggtca gcgcattgac caggctcgac ttgccgacat tggagcggcc ggcgaaggcg
      121 acctcgggca gcgcgatggc cggcagcgag tcgagcgagg cggcaccggc cacgaagtcg
      181 caagcgccgg cgaacagctt gcgcgccgct tcgatctcgt ccggcgtgcg ccctgccggt
      241 ttctgatcgc ccatcacctc ttcttggccg cgcctttgcc gcccttcttg cccccgccgc
      301 tgccgctgcc gccaccgccg ccatcggtgg gcgccggcgc cggcagggcg gccgcgaccg
      361 cgggcttggc cttgccgccg ccgatcggca cgccgtggcg ccgcatgatc gtgtactgct
      421 gggcaatcga cagggtgttg ctccacgccc agtagatcac caggccggcc gcgaacgaac
      481 ccagcatgaa ggtgaacagg atcggcagaa actggaagac gcgcgcctgc accggatcgg
      541 tcggcgccgg gttcagcttc tgctgcatgt acatcgtgac gcccatgatc aggggccaca
      601 ggccgatgtt gaagaaatgc aggaactccg gcacctgcca gtggaacagg ccgaagccgg
      661 tcaggactgt gagcgggtcg ggcgcgctca ggtccttgat ccagccgaag aacggctgat
      721 ggcgcatctc gatggtggtg tagagcacct tgtagagggc gaagaacacc gggatctgca
      781 ccacgatggg caggcagccg gctgccggat tgaccttctc gcggcgatag agctgcatca
      841 gctcctggtt catgcgctgg cggtcctcgc cgtagcgctc cttcagcttc tccatctccg
      901 gctgcagcgc cttcatcttg ctcatcgccg cataggactt gttggccagc gggaagaaca
      961 ccgccttgac cagcaccgtc agcgccagga tcgccacgcc gaaattgccg agctggccgt
     1021 acagccactc gagcagccag aacagcggct tggtgaagaa ccagaaccag ccccagtcga
     1081 tcgtgaggtc gaacttctcg atgctgtact tcttttcgta ggcgtcgatc agcttcacga
     1141 tcttggcgcc ggcgaacagg cgcgcgtcgg ttgccgccgt ggcgcccggc gcgatctcct
     1201 tgcccggcgc gacatagtcg atctggtatt tgaggtcggc gcccgagccg gtcgacttga
     1261 tcgacacgtc gaccttcgac tgctggtcgg gcaccagcgt cgccatccag tatttgtcgg
     1321 tgatgccgac ccagccgccg gtggtgctga tcttctgcgg cggcttgttg tccttgaagt
     1381 cggagtagct gaactccttc aggctgccgt tgaagacgcc gtacggcccc tcatgcagga
     1441 tgtagatgcc ctcggccgcg ggctggccgt agcgcaccac caggctccac gggaagaccg
     1501 tcaccggctt gtcggacttg ttctcgacgc tctgcctgac gtcgaacatg aagaattcgt
     1561 cgagcgcgac atcgagcgcg aaggtcagtc cctggccgtt gtcccaggtc agccgcaccg
     1621 gcttgcccgg cgcgacgctg ggattgcccg cggtccacat cgtgtcgggg ccgggcagct
     1681 tgacgttggg gtccgaggcc gaccagccga actcggcgta atagggatgc tcggtgccca
     1741 ccggcgacag caccggcacc gggtcgctct tgggatcgat ggtctcgcga tacttcacga
     1801 gccgcacatc gtcgatgcgc gcgcctttca gcgagatcga acccgtcagc tcgggcgtgt
     1861 cgaaggtcac gcgcggcgag cgcgcgagcg cttcctttcg gctgacgatc tgcggcgccg
     1921 ccgcggtggc cggttgcgcg cccggcgcca ccggctggcc ggacggcgct tgcggcgtgc
     1981 cggtggtgcc gggcgtcgtc gtctgctgct gggtggtggt gttgaccggc ggcttggtcg
     2041 gcgggaaggc ata
//
LOCUS       DASWGA010000694         2771 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1222112, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000694 DASWGA010000000
VERSION     DASWGA010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1222112"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VF991_16195"
     CDS             complement(<1..396)
                     /locus_tag="VF991_16195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558036.1"
                     /translation="MPVISPSAFAPPAANDAAAPLAADLREKIRRLERAHSAQRVGQA
                     AVPLDVPAIDALLPEGGLLTGALHEIEAGPAPSGRVAAHDGAALGFAAHLLGRFASRS
                     TGTLLWCRRPSGASDAPPYAPALAAWFDPA"
     gene            645..971
                     /locus_tag="VF991_16200"
     CDS             645..971
                     /locus_tag="VF991_16200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011994933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HEX9558037.1"
                     /translation="MSIRPEDIDARPEQLPLTHPGTMLAQHYLKPLGITPYRLAKDIK
                     VPLNRITAIVAGQRAITPDTALRLERYLGTRASFWINLQADHALETVRRRNERRILAD
                     ITPLTA"
     gene            982..1812
                     /locus_tag="VF991_16205"
     CDS             982..1812
                     /locus_tag="VF991_16205"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9558038.1"
                     /translation="MTVRLPLAVLLAAVITLLAGPVLARCSQNVAGLPPGLQLASRDG
                     LSVAAGNSPSRAVITFVGHASYQIDTPQGVRAITDYNGYNGFGRKPDIVTMNNAHSTH
                     FTDDPEDGITYVLRGWPSKPGETEAKHDITLKDMKVWNVPTNARDWGSNTARINGNSI
                     FIFAIADLCIAHLGHLHHRLTKDHLDELGRIDVLMVPIDGSYTMGQPLMVDVIKQIQP
                     KLVLPMHYWGRAQVERFQSLMQPLDADFVWPDRRSIEVVREELPEKLTVVVLGGNGGD
                     "
     gene            1809..2600
                     /locus_tag="VF991_16210"
     CDS             1809..2600
                     /locus_tag="VF991_16210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016919682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0019748 - secondary metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HEX9558039.1"
                     /translation="MTVQAYLRRWSLVADGEPVTTPSSILLPVRRGGEPALLKIARAE
                     EERRGGRLMAWWDGDGAARVLAQGGEAILLERATGPRSLAAMVAAGEDDEASRILCAV
                     ATRLHAPRRRRPPPELLPLSRWFEALAPAANALGGLLAEADAMAQRLLSTPRDLAVLH
                     GGIHHGNVLDAGERGWIAIDPKGLWGERTFDFVNILRNPDGAIALRPARFAHQVEVLA
                     TAAALDRRRLVEWTLAFAGLSSAWCIADQKPAALDLASRPWLPRC"
     gene            2617..>2771
                     /locus_tag="VF991_16215"
     CDS             2617..>2771
                     /locus_tag="VF991_16215"
                     /inference="COORDINATES: protein motif:HMM:NF016142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HEX9558040.1"
                     /translation="MNSLLTLAPEVRSALEAGQPVVALESTLIAHGMPYPQNLEMAGR
                     LSAAVRQ"
BASE COUNT          471 a          960 c          900 g          440 t
ORIGIN      
        1 cgccggatcg aaccaggcgg cgagcgccgg ggcataaggc ggcgcgtcgg acgcgcctga
       61 cgggcggcgg caccacagca gggtgcctgt ggacctcgat gcgaagcggc ccagcagatg
      121 ggcggcaaag cccagcgccg cgccatcgtg ggcggcgacg cggccggagg gagcgggacc
      181 cgcctcgatc tcgtgcaggg cgccggtcag cagaccgcct tcgggcagca gggcgtcgat
      241 cgccggcaca tcaagcggca cggcggcctg tccgactcgc tgggcgctat gggcgcgctc
      301 cagccggcgg attttttcgc gcaaatctgc cgcgagcggg gctgccgcat cgttggcggc
      361 agggggagca aaggcgcttg gggaaatgac gggcatcgtc ccctcgaagt ccgaacgcgt
      421 tggaggatgt tctctgtttg ttcttagtaa ttcgagctcg gagagtcaac ccggaacgcc
      481 gatcacataa ttcttgcgtg ccagtagaag ggaatgcgca cctccagcca caactaacag
      541 tatctgttcg cttagatcct actaaatgtg ccgtgagctt ccgcccattg gttacgaggc
      601 gcgtaacgga tacggtgtct gaccatcacg gccaagagac gctcatgagt atccgtcccg
      661 aagacatcga tgcccgtccg gagcagctgc cgctcaccca ccccggcacg atgcttgcgc
      721 agcattatct gaagccgctc ggcatcacac cctatcgact ggccaaggac atcaaggtgc
      781 cgctcaatcg catcactgcc attgtcgccg gccaacgagc gatcacgccg gacaccgcac
      841 tgcgcctgga gcgctatctt ggcacccggg cgtctttctg gatcaatctc caggcagacc
      901 atgctctcga gactgtccgt cgccgcaatg agcgacgcat ccttgccgac atcacaccac
      961 ttaccgcgta aaggaggccc gatgaccgtg cgacttcccc tcgccgtact gctcgccgct
     1021 gtcatcactc tgctggccgg accggtgctg gcgcgctgct cgcagaacgt tgccggcctg
     1081 ccgccgggcc tgcagctcgc ctcgcgcgac ggcctgtccg tggcggccgg caattcgccc
     1141 agccgcgccg tcatcacctt cgtcggccat gccagctacc agatcgacac gccgcagggc
     1201 gtgcgggcga tcaccgacta caacggctac aacggtttcg gtcgcaagcc cgacatcgtg
     1261 accatgaaca acgcccattc cacccacttc accgacgatc ccgaggacgg catcacctac
     1321 gtgctgcgcg gctggccctc caagcccggc gagaccgagg ccaagcacga tatcaccttg
     1381 aaggacatga aggtgtggaa cgtgccgacc aacgcccgcg actggggctc caacaccgcg
     1441 cgcatcaacg gcaactcgat cttcatcttc gccatcgccg acctttgcat cgcccatctc
     1501 ggccatctgc accatcggct gaccaaggac catctcgacg aattgggccg catcgacgtg
     1561 ctgatggtgc cgatcgacgg ctcctacacg atgggccagc cgctgatggt cgacgtcatc
     1621 aagcagatcc agcccaaatt ggtgctgccc atgcactact ggggccgcgc ccaggtcgag
     1681 cgcttccaga gcctgatgca gccgctcgac gccgacttcg tctggcccga ccgccgctcg
     1741 atcgaggtcg tgcgcgagga gctgccggag aagctcacgg tcgtcgtgct gggcggcaac
     1801 ggcggggatt gacggtccag gcctacctcc ggcgctggag tctcgtcgcg gacggcgagc
     1861 cggtcacgac gccatcgagc atcctcttgc cggtgcggcg cggcggcgag cccgccctgc
     1921 tgaagatcgc tcgcgccgaa gaagagcggc gcggcggccg attgatggca tggtgggacg
     1981 gcgacggcgc ggcgcgggtg ctggcgcagg gcggagaggc gattctgctg gagcgcgcca
     2041 ctggcccgcg cagcctcgca gccatggtcg ccgccggcga ggacgacgag gcaagccgca
     2101 tcctgtgcgc cgtcgcgacc cgactgcacg caccgcgcag gcgtcgtccg ccacccgagc
     2161 tgctgccgct gtcgcgctgg ttcgaggcgc tggcgccggc ggccaatgcg ctgggcggcc
     2221 ttctcgccga agccgacgcg atggcgcaga ggctgctctc gacaccgcgg gacttggccg
     2281 tcctgcacgg cggcatccat cacggcaatg tgctggacgc gggcgaacgc ggctggatcg
     2341 ccatcgatcc caagggcctt tggggcgagc gcaccttcga cttcgtcaac atcctgcgca
     2401 atcccgatgg cgccatcgcg ctcaggccgg cgcggttcgc gcaccaagtc gaagtgctgg
     2461 caacggcggc cgcgctcgac cggcgccggc ttgtcgaatg gacactggcc ttcgccggcc
     2521 tctcctcggc ctggtgcatc gccgaccaaa agccggcggc gctcgatctg gcctcgcggc
     2581 cttggctgcc gcgatgctga gatcctagga tgacgcatga attcgctgct caccctggcg
     2641 cccgaagtgc gcagcgcgct cgaggccggt cagccggtgg tggcgctgga gagcacgtta
     2701 atcgcccatg gcatgcccta tccgcagaat ctggagatgg cgggacgcct ctcggcggct
     2761 gtccgacagg a
//
LOCUS       DASWGA010000695        10612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1470355, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000695 DASWGA010000000
VERSION     DASWGA010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10612
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470355"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1585
                     /gene="infB"
                     /locus_tag="VF991_16220"
     CDS             <1..1585
                     /gene="infB"
                     /locus_tag="VF991_16220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011583238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEX9558041.1"
                     /translation="AEVVSFETAVELEAMEKSRATGTTPRGPVITVMGHVDHGKTSLL
                     DAIRETNVAAGEAGGITQHIGAYHVEKRGRKIVFLDTPGHEAFTAMRARGAQVTDVAV
                     LVVAADDGVMPQTKEAIAHAKAAGVPMIIAINKMDKAGADPNRVRTELLQYEVQVEQL
                     GGEIQSIEVSATKKTNLDKLEEAIVVQAEVLELKANPDRPADGVVIEAQLDQGRGSVA
                     TVLVQRGTLKVGDVLVAGAVWGRVRRLIDDRANAVQSAGPAVPVEILGLDGTPLAGDE
                     FHVVESEARAREIADFRARRDRQAQLARVAGGRGTLEEMIKGIREGTAKELPVLIKAD
                     VQGSAEALAGALQRLSTEKVATRVVYSGVGGISEADLTLAKASGALIIGFNVRANPQA
                     REIAKRDKVDIRYYSIIYKVTEDIQALMVGLLDPTYKETFLGNAQIREVFRITKVGNV
                     AGCMVTEGIVKRGAKVRLLRDNVVIHEGTLKTLKRHKDEVREVQHGFECGMAFENYDD
                     IKVGDVIECFDVEEVQATL"
     gene            1660..2064
                     /gene="rbfA"
                     /locus_tag="VF991_16225"
     CDS             1660..2064
                     /gene="rbfA"
                     /locus_tag="VF991_16225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEX9558042.1"
                     /translation="MPRRRSSERDNRGHSQRQLRVGEELRHLLAELLERSDMRDPDLR
                     GASITVTAVNVSPDLRNATAFVMPLGGQDEPRLLAAMRRAAPWFRARVGERAGLRYAP
                     EIRFEIDRTFDEADRIGSLLRRPDVARDIKDD"
     gene            2076..2981
                     /gene="truB"
                     /locus_tag="VF991_16230"
     CDS             2076..2981
                     /gene="truB"
                     /locus_tag="VF991_16230"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEX9558043.1"
                     /translation="MSRRKTGDKVDGWVILDKPVGLGSTPAVGKVRRLFGAQKAGHGG
                     TLDPLASGVLPIALGEATKTVPFVMDGRKEYRFTVRFGEARSTEDAEGEVTATSDARP
                     SDLEIRSALAGFIGEIEQIPPAFSALKVAGKRAYDLARAGEAVALKPRRILVERLELV
                     GRPDANHADFVISCGKGTYIRSLGRDLAQALGTVGHLSALRRTAAGPFREEAAISLSK
                     LEALGHIPALLGALAPVATALDDIPALALTEAQADRLRHGQPVLLTRDAPPSGALLRA
                     ETGSRLVALVRSDGASLKPVRVFNL"
     gene            2998..3267
                     /gene="rpsO"
                     /locus_tag="VF991_16235"
     CDS             2998..3267
                     /gene="rpsO"
                     /locus_tag="VF991_16235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEX9558044.1"
                     /translation="MSITAARKAELIKSYAQGNADTGSPEVQVAILSERIANLTEHFK
                     GHAKDHHSRRGLLKMVGQRRRLLDYLKSRDSKRYDTLIERLGLRR"
     gene            3473..5617
                     /gene="pnp"
                     /locus_tag="VF991_16240"
     CDS             3473..5617
                     /gene="pnp"
                     /locus_tag="VF991_16240"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEX9558045.1"
                     /translation="MFQVFRKEVEWAGRKLVLETGKIARQADGAVLATYGGTTVLAAV
                     VFEKQPKPGLDFFPLTVNYQEKAFAAGKIPGGFFKREGRPSEKEVLTSRLIDRPIRPL
                     FHESYRNETLVVATTLAHDLENDPDIVAMIATSAALTISGVPFMGPIAGARVGYLDGK
                     FVVNPTLDQIEQSTLDLVVAGTKEGVLMVESEAKELPEDVMLNAVMEGHRSFQPVIDA
                     IIQLAEHCAKDPLPLTEASEASKTVAARLKAAMRAKLAEAYGETQKLARQTKVGTVKT
                     EAKKLFEGNDEELAAFGEQFGNLEADVVRNAILDTGKRIDGRDTKTVRPIVAEVGVLP
                     RAHGSALFTRGETQALVVATLGTGQDEQIIDALEGEYREHFMLHYNFPPYSVGEVRRM
                     GSPSRRDIGHGKLAWRALRPVLPSKEKFPYTIRVVSEITESNGSSSMASVCGGSLALM
                     DSGVPMERPVAGIAMGLIKEAERFAVLSDILGDEDHLGDMDFKVAGTEKGITSLQMDI
                     KITSITEEIMKVALGQAKDGRLHILGEMAKGLGGARESVSQNAPRITQFTIPKDKIRE
                     VIGTGGKVIREITETTGTKIDIEDDGTIKVAAVDAKAGQAAIDWIKGIVAEPEVGVIY
                     NGKVVKTVEFGAFVNFLGARDGLVHISELAPRRVAKVNDVVKEGDQVKVKVLGVDDRG
                     KVRLSMKAVDQQTGEDISQKAREEQPAPVAGE"
     gene            5683..6309
                     /locus_tag="VF991_16245"
     CDS             5683..6309
                     /locus_tag="VF991_16245"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase"
                     /protein_id="HEX9558046.1"
                     /translation="MRTSRRALIIAAGASLLPLHPTLAAALIATPSQTEGPFYPTALP
                     ADTDNDLVQVRGQAAQAMGTVLHLQGRVLDLNGRPVEGALVEIWQCDAQGIYDHPRQP
                     GRERRDSAFQGYGRMMAADGRYSFRTLRPVAYPGRTPHIHVKVATAGGGLLTSQFYIA
                     GEPGNERDGIFRAAARDPRQRERIEMRLAPAPGLETGALATTMDIVVG"
     gene            complement(6318..7133)
                     /locus_tag="VF991_16250"
     CDS             complement(6318..7133)
                     /locus_tag="VF991_16250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010913330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9558047.1"
                     /translation="MPQMMAGKRGLIMGVANERSIAWGIAQALHAAGAEMAFTYQGAA
                     FGKRVLPMVEKLGCKIVEEADVEDEPSLDRLFARLNKDWGRLDFVVHAIAFSDKEELK
                     GRYVDTTKANFQRSLTISCYSFTEIARRALPLMTEGGSLITLTYEGAVRVMPSYNVMG
                     VAKAALEASVRYLAADLGPQGVRVNALSAGPMRTLAGAVIGSARYVYRLSREASPLRR
                     NIELTDVGGAALYLLSDLSAGVTGTVHYVDAGYHAIGMPPSGNNGQNGEQNGE"
     gene            complement(7247..8485)
                     /gene="fabB"
                     /locus_tag="VF991_16255"
     CDS             complement(7247..8485)
                     /gene="fabB"
                     /locus_tag="VF991_16255"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HEX9558048.1"
                     /translation="MKRVVVTGLGVVSSIGNNAVEVTRSLRDGKSGIEFVPQYKELGF
                     RSQIAGTLKMNVDDLVDRRLRRFMGDGAAFAYLAMKEAIADAGLADGEISNDRTGVVA
                     GSGGPTTGAIVQSAIIAKEKGPKRVGPFMVPRAMSSTVSANLATAYKIKGLSYSISSA
                     CSTSSHCIGNAVECIQLGKADRMFAGGGEELDWTLSVLFDAMGAMSSKFNDTPERASR
                     AYDKDRDGFVISGGGGILVLEDLEVAKARGAKIYAEIIGYGATSDGADMVAPSGEGAI
                     RCMKLALDGFPGAARRNAPVNYINTHGTSTPVGDITELDAIRVAFGNDKLPTVSSTKS
                     LTGHSQGATGAHEAIYSLLMLKEDFVAASANIDNLDPGVGDYPVARQRIDKAGLETVM
                     SNSFGFGGTNACLLFSRYDH"
     gene            complement(8490..9020)
                     /gene="fabA"
                     /locus_tag="VF991_16260"
     CDS             complement(8490..9020)
                     /gene="fabA"
                     /locus_tag="VF991_16260"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabA"
                     /protein_id="HEX9558049.1"
                     /translation="MSEKKHSYTFEDLIECARGHLFGPGNAQLPLPPMLMFDRIVKID
                     DTGGQFGKGEVVAELDVKPELWFFACHFKGDPVMPGCLPLDALWQLVGFFLGWMKAPG
                     RGRALGVGEVKFTGMVLPTVRKLTYHVHLKRVILRKLVLGIADGFVHADGKQIYEVSG
                     LKVGLVQDAAAVPAAS"
     gene            9156..9563
                     /locus_tag="VF991_16265"
     CDS             9156..9563
                     /locus_tag="VF991_16265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009463928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX9558050.1"
                     /translation="MPGTTPDFTARLRAAGLRPTRQRVALARLLFEGGHRHVTAEGLH
                     AEVRATRMPVSLATVYNALNQFRDAGLLREVVVAPGRSYFDTNTGHHHHFFVEPDGEL
                     HDFPSDKVTIAGLPTPPKGTRLSRVDVIVRVRR"
     gene            9694..10113
                     /locus_tag="VF991_16270"
     CDS             9694..10113
                     /locus_tag="VF991_16270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="HEX9558051.1"
                     /translation="MANLKGSKTEDNLKAAFAGESQANRRYLYFAQKADVEGYNDVAA
                     VFRSTAEGETGHAHGHLEFLEVSGDPATGLPIGATTSNLKAAIAGETHEYTDMYPGMA
                     RTAREEGFAEIADWFETLAKAEKSHAGRFQKALDTMA"
     gene            10192..>10612
                     /locus_tag="VF991_16275"
     CDS             10192..>10612
                     /locus_tag="VF991_16275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016919074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HEX9558052.1"
                     /translation="MREGSLEAPTRHALDWQNPWFWDEKALEKEMERVFDICHGCRRC
                     FNLCDSFPRLFDLIDNGPTGELDGVKKQDYGRVEAACTLCDMCFMTKCPYVPPHEFAL
                     DFPHLMLRYRAAEQRSGGGAAIQRQLAKTDRNGKLAGL"
BASE COUNT         1893 a         3548 c         3536 g         1635 t
ORIGIN      
        1 cgccgaagtg gtctcattcg agacggccgt cgaactcgag gcgatggaaa agagccgcgc
       61 caccggaacg acgccgcgcg gcccggtgat cacggtcatg ggtcacgtcg atcatggcaa
      121 gacgtcgctt ctcgacgcca ttcgcgaaac gaacgtcgcc gccggcgagg cgggcggcat
      181 cacgcagcac atcggcgcgt atcacgtcga gaagcgcggt cggaagatcg tcttcctcga
      241 cacgccgggc catgaggcct tcaccgcgat gcgcgcccgt ggggcgcagg tgaccgatgt
      301 cgccgtgctg gtggtggcgg ccgacgacgg cgtcatgccg cagaccaagg aggcgatcgc
      361 ccacgccaag gctgcaggcg tgccgatgat tatcgccatc aacaagatgg acaaggccgg
      421 cgccgacccc aatcgggtcc gcaccgagct gctgcagtac gaagtgcagg tcgagcagct
      481 gggcggcgag atccagtcga tcgaggtctc ggcgaccaag aagaccaacc tcgacaagct
      541 cgaggaagcc atcgtcgtgc aggccgaggt gctcgagctc aaggccaacc cggatcgccc
      601 ggccgacggc gtcgtgatcg aagcgcagct cgatcagggc cgcggttcgg tggcgacggt
      661 gctggtccag cgcggcacgc tcaaggtcgg cgacgtgctg gtcgccggcg ccgtgtgggg
      721 tcgcgtgcgt cgcctgatcg acgatcgcgc caacgccgtg cagagcgccg gaccggccgt
      781 tccggtcgag atcctgggcc tcgacggcac gcctctggcg ggcgacgagt tccatgtcgt
      841 cgagagcgag gcgcgcgccc gcgagatcgc cgacttccgc gcccgtcgcg accggcaggc
      901 ccagctggcc cgcgtcgcgg gcggccgcgg caccctcgag gagatgatca agggcatccg
      961 cgaaggcacc gccaaggagc ttccggtgct catcaaggcg gacgtgcagg gttcggcgga
     1021 agcgctggcc ggcgcgttgc agcggctcag caccgagaag gtggcgaccc gcgtcgtcta
     1081 cagcggcgtc ggcggcatca gcgaggccga cctgacgctc gccaaggcgt cgggcgcgct
     1141 gatcatcggc ttcaacgtgc gcgccaatcc gcaggcgcgc gagatcgcca agcgcgacaa
     1201 ggtcgacatc cgctactaca gcatcatcta caaggtcacc gaggacattc aggcgctgat
     1261 ggtcggcctg ctcgatccga cctacaagga gaccttcctc ggcaacgcgc agatccgcga
     1321 ggtcttccgc atcaccaagg tcggcaacgt cgccggctgc atggtcaccg aaggcatcgt
     1381 caagcgcggc gccaaggttc gcctgctgcg cgacaacgtg gtgatccacg agggcacgct
     1441 gaagacgctc aagcgccaca aggacgaggt ccgcgaggtc cagcacggct tcgagtgcgg
     1501 catggcgttc gagaactacg acgacatcaa ggtcggcgac gtgatcgaat gcttcgacgt
     1561 cgaggaagtc caggcgacgc tctaggtatc gcaagcgaag atcgcgccac gggaatggcg
     1621 cgccccggcg acgagctggg gtcaatcgag gatcaggcaa tgccccggcg tcgctcctcc
     1681 gaacgcgaca atcgcggcca tagccagcgc cagctccgcg tcggcgagga gctgcgccac
     1741 ctgctcgccg agctgctcga acgaagcgac atgcgcgatc ccgatctgcg cggcgcctcg
     1801 atcaccgtca ctgcggtcaa tgtcagtccc gacctgcgca acgccactgc gttcgtcatg
     1861 ccgctgggcg gccaggacga gccgcgtctg ctcgccgcga tgcgccgcgc cgcgccgtgg
     1921 ttcagggccc gcgtcggcga acgtgccggc ctgcgctatg cgccggagat ccgcttcgag
     1981 atcgaccgca ccttcgacga ggccgaccgc atcggctccc tgctgcgccg gcccgacgtg
     2041 gcgcgcgaca tcaaggacga ctagccgagc cggcgatgag ccgcaggaaa acaggcgaca
     2101 aggtcgacgg ctgggtgatc ctcgacaagc cggtggggct cggctcgact ccggccgtcg
     2161 gcaaggtgcg ccggctgttc ggggcgcaga aggcgggcca tggcggcacg ctcgatccgc
     2221 tggccagcgg cgtgctgccg atcgccctcg gcgaggcgac caagaccgtg cccttcgtca
     2281 tggatggccg caaggaatac cgcttcaccg tgcgcttcgg cgaggcgcgc tcgacggagg
     2341 atgcggaagg cgaggtcacc gccaccagcg atgcccgccc gagcgacctc gagatacgaa
     2401 gcgcgctggc gggcttcatc ggtgaaatcg agcaaatccc gccagccttc tcggcgctga
     2461 aggtcgcggg caagcgcgcc tacgatctgg cgcgtgcggg cgaagcggtc gccctcaagc
     2521 cgcgccgcat cctcgtcgaa cgcctggaac tggtcggccg gccggacgca aatcatgcag
     2581 atttcgtgat ttcctgcggc aaaggcacct acatccggtc cctgggccgc gatctggcgc
     2641 aagcgctggg caccgtcgga cacctctcgg cgctgcgtcg gaccgccgcc gggccgtttc
     2701 gggaagaggc agccatttcg ctttccaaac tggaggccct cgggcatatt cccgcgcttc
     2761 tcggggccct ggctcccgtc gcgaccgcgc tggacgacat cccggcgctg gccttgacgg
     2821 aggcccaagc ggatcggctg cgccacggcc agccggtgct cttgacccgg gacgcaccgc
     2881 cgtccggcgc ccttttacgc gccgagaccg gcagcaggct tgtagcgctg gtccgttcgg
     2941 acggtgcctc tctcaagccg gtgcgcgtct tcaacctcta agtcatggag acaaccgatg
     3001 tcgattacag ccgcccgcaa ggcggagctg atcaagtcgt atgcccaggg caatgccgac
     3061 acgggctcac cggaggttca ggtcgccatc ctgagcgaac gcatcgccaa tctcaccgag
     3121 cacttcaagg gccacgcgaa ggatcatcat tcgcgccgtg gcctgctcaa gatggtcggc
     3181 caacgccgcc ggctgctcga ttatctcaag tccagggaca gcaagcgcta cgacaccctg
     3241 atcgagcgcc tgggtcttcg gcgttaattc acggccccat ccggggccgt ttcgcgtcgc
     3301 gtcgtccggt tcccgtaaaa atttggctgg ctgacgcgac ttcgcagtaa ccgggagggc
     3361 aggggcgaga gcaaaggccc gacccggtcc tgccggcgca agggcgccgg cgggcggcaa
     3421 tcgccagacg ggggcgacgg ccgtgtagga aaggaagatg gatatgagtg acatgtttca
     3481 agtgttccgt aaggaagtgg aatgggccgg ccgcaagctc gtgctcgaga ccggcaagat
     3541 cgcgcgccaa gccgacggcg ccgtcctggc aacctacggc ggcaccacgg tgctggccgc
     3601 cgtcgtgttc gagaagcagc ccaagcccgg gctcgatttc ttcccgctga ccgtgaacta
     3661 ccaggagaag gcatttgccg ccggcaagat cccgggcggc ttcttcaagc gtgaaggccg
     3721 gccctccgag aaggaggtcc tgacctcgcg cctgatcgac cggccgatcc gtccgctgtt
     3781 ccacgagagc tatcgcaacg agaccttggt cgtcgccacc acgctggcgc atgacctgga
     3841 gaacgatccc gacatcgtgg cgatgatcgc cacctcggcc gcgctcacca tcagcggcgt
     3901 gccgttcatg ggtccgatcg ccggcgcccg cgtcggctat ctcgacggca agttcgtggt
     3961 caacccgacg ctcgatcaga tcgagcagag cacgctcgac ctcgtcgtcg ccggcaccaa
     4021 ggaaggcgtg ctgatggtcg agtcggaggc caaggagctg cccgaagacg tcatgctgaa
     4081 cgccgtcatg gagggtcatc gctccttcca gccggtgatc gacgccatca tccagctcgc
     4141 cgagcattgc gccaaggatc cgctgccgct taccgaggcg tcggaagcat ccaagacggt
     4201 ggcggcccga ctcaaggccg ccatgcgggc caagctcgcc gaggcctatg gcgagaccca
     4261 gaagctcgcc cgccagacca aggtcggcac ggtcaagacc gaggccaaga agctgttcga
     4321 gggcaacgat gaagaactcg cggcgttcgg cgagcagttc ggcaacctcg aggccgacgt
     4381 cgtgcgcaac gccatcctcg acaccggcaa gcgcatcgac ggccgcgaca ccaagaccgt
     4441 gcggccgatc gtggccgagg tcggcgtgct gccgcgcgcc cacggctcgg ccctgttcac
     4501 ccgcggcgag acccaggcgc tggtcgtggc cacgctgggc accggccagg acgagcagat
     4561 catcgacgcg ctcgagggcg aataccgcga gcacttcatg ctgcactaca atttcccgcc
     4621 ctactcggtg ggcgaagtgc gccgcatggg ctcgccgagc cggcgcgaca tcggccacgg
     4681 caagctcgcc tggcgcgcgc tgcgcccggt gctgcccagc aaggagaagt tcccctacac
     4741 catccgcgtc gtgtcggaga tcaccgagag caacggctcg tcgtcgatgg cctcggtgtg
     4801 cggcggttcg ctggcgctga tggattccgg cgtgccgatg gaacgtccgg tggccggcat
     4861 cgccatgggc ctgatcaagg aagccgagcg cttcgccgtg ctttcggaca tcctgggcga
     4921 cgaggatcac ctgggcgaca tggacttcaa ggtggccggc accgagaagg gcatcacctc
     4981 gctgcagatg gacatcaaga tcacctcgat caccgaggag atcatgaagg tcgctctcgg
     5041 ccaggccaag gacggccgcc tccacatcct gggcgagatg gccaagggcc tgggcggggc
     5101 gcgcgagtcg gtcagccaga acgcgccgcg catcacccag ttcaccatcc ccaaggacaa
     5161 gatccgcgaa gtgatcggca ccggcggcaa ggtgatccgc gagatcaccg aaaccaccgg
     5221 caccaagatc gacatcgagg acgacggcac catcaaggtg gcggcggtcg acgccaaggc
     5281 gggccaggcc gccatcgact ggatcaaggg catcgtcgcc gagccggaag tgggcgtgat
     5341 ctacaacggc aaggtggtga agacggtcga attcggcgcc ttcgtcaact ttttaggcgc
     5401 gcgcgatggc ttggtgcaca tctcagaact ggcgccgcgc cgcgtcgcca aggtgaacga
     5461 cgtggtcaag gaaggcgacc aggtaaaggt caaggtcctg ggcgtcgacg atcgcggcaa
     5521 ggtgcggctc agcatgaagg cggttgacca gcagaccggc gaggacatct cccagaaggc
     5581 tcgcgaagag cagcctgcac ccgtggccgg cgagtaaatt actggactgt cacgagaacg
     5641 gcggccatca ggccgccgtt tttgtctata agacttggca gtatgagaac ctcccgcaga
     5701 gctctgatca tcgcggccgg tgcaagcctg ctgccgctcc atccgaccct ggccgcggcc
     5761 ttgatcgcca cgccgtcgca aaccgagggc ccgttctatc ccaccgcgct gcccgccgac
     5821 accgacaacg acctcgtcca ggtgcgcggc caggcagcgc aggcaatggg cacggtgctt
     5881 catctgcagg gtcgcgtgct cgacctgaac ggccgtccgg tcgagggcgc gctggtcgag
     5941 atctggcaat gcgacgccca gggcatctac gatcatccgc gccagcccgg acgcgaacgg
     6001 cgcgacagcg ccttccaggg ttacggccgc atgatggcgg ccgacggccg ctacagtttc
     6061 cgcacgctca ggcccgtcgc ctatcccggc cgcacgccgc acatccacgt caaggtcgcg
     6121 acggccggcg gcggcctgct gaccagccag ttctatatcg ccggcgagcc gggcaacgag
     6181 cgcgacggca tctttcgcgc cgccgcccgc gatccacgcc agcgcgagcg catcgagatg
     6241 cgactggccc ccgcgcccgg cctcgagacg ggcgcgctcg ccacgaccat ggacatcgtc
     6301 gtcggctaac cggcgattta ttcgccgttc tgctcgccgt tctggccgtt gttgcccgac
     6361 ggcggcatgc cgatggcgtg gtagccggca tcgacgtagt ggaccgtgcc ggtgacgccg
     6421 gcgctgagat cggacagcag atagagagcg gcgccgccca cgtcggtgag ctcgatattg
     6481 cggcgaagcg gcgaggcttc gcgcgatagc cgatagacgt aacgggcgct gccgatcacc
     6541 gcgccggcca gggtgcgcat cggcccggcc gacagggcgt tgacccgcac gccctgcggg
     6601 ccgaggtcgg ccgcgagata gcgcacgctc gcctcgagcg cggccttggc cacgcccatg
     6661 acgttgtagg acggcatcac ccgcaccgcg ccctcgtagg tgagcgtgat caggctgccg
     6721 ccttcggtca tcagcggcag ggcgcggcgg gcgatctcgg tgaaggagta gcaggagatc
     6781 gtgaggctgc gctggaagtt ggccttggtc gtgtcgacgt agcggccctt gagctcctcc
     6841 ttgtcggaga aggcgatggc atggaccacg aaatcgagcc gcccccagtc cttgttcagg
     6901 cgggcgaaca gacggtcgag gcttggctcg tcttcgacgt cggcctcctc gacgatcttg
     6961 cagccgagct tctcgaccat gggcagcacg cgcttgccga acgccgcgcc ctggtaggtg
     7021 aaggccatct cggcgcccgc ggcgtgcagg gcctgggcga tgccccaggc gatcgagcgc
     7081 tcattggcca cgcccatgat cagcccgcgc ttgccggcca tcatctgggg cacgtcgggc
     7141 agggctgcgg ctttggaagg cgtgtggctg ggcgtcgcgg tcgttgccga cccgccgccg
     7201 gaggcatcgg gggcggcgga aaggggattg tcgggcatgg tccccttcag tggtcgtagc
     7261 gcgagaacag caggcaggcg ttggtgccgc cgaagccgaa actgttcgac atcaccgtct
     7321 cgaggcccgc cttgtcgatg cgctggcggg cgaccggata gtcgccgacg ccgggatcga
     7381 gattgtcgat attggccgag gcggcgacga aatcctcctt cagcatcagc agcgaataga
     7441 tcgcctcgtg ggcaccggtg gcgccctggc tgtggccggt cagcgacttg gtcgagctca
     7501 cggtcggcag cttgtcgttg ccgaaggcaa cgcggatcgc gtcgagctcg gtgatgtcgc
     7561 ccaccggcgt cgacgtgccg tgggtgttga tgtagttgac cggcgcattg cgccgcgccg
     7621 cgcccggaaa gccgtccagg gcgagcttca tgcagcgtat tgcgccttcg ccggacggtg
     7681 ccaccatgtc ggcgccgtcg gaggtggcgc catagccgat gatctcggcg tagatcttgg
     7741 cgccgcgcgc cttggcgact tcgaggtctt ccagcacgag gatgccgccg ccgcccgaga
     7801 tcacgaagcc gtcgcgatcc ttgtcgtagg cgcggcttgc ccgctcgggc gtgtcgttga
     7861 acttcgacga catggcgccc atggcgtcga acagcaccga caaggtccag tcgagctcct
     7921 cgccgccgcc ggcgaacatg cggtcggcct tgccgagctg gatgcattcg acggcgttac
     7981 cgatgcagtg ggacgaagtc gagcaggccg agctgattga ataggagagg cctttgatct
     8041 tgtaggcggt cgccagattg gccgagaccg tgctcgacat ggcgcgcggc accatgaagg
     8101 ggccgacccg cttggggcct ttttccttgg cgatgatcgc cgactgcacg atggcgccgg
     8161 tggtcggccc gcccgatccg gcgaccacgc cggtgcgatc gttcgagatc tcgccgtcgg
     8221 cgaggcccgc gtcggcgatc gcctccttca tggcgagata ggcgaaggcc gcgccatcgc
     8281 ccatgaagcg gcgcaggcgg cggtcgacca gatcgtcgac gttcatcttc agggtgccgg
     8341 cgatctggct gcgaaagccg agctccttgt actgcggcac gaattcgatg ccggacttgc
     8401 cgtcgcgcag ggaacgcgtc acctcgacgg cattgttgcc gatcgaggag accacaccca
     8461 ggccggtgac gacgacacgt ttcatgatgt cagctcgctg ctggaacagc cgccgcgtct
     8521 tggacaaggc cgactttcaa gccgctgacc tcgtagatct gcttgccatc ggcatgaacg
     8581 aagccatcgg cgatgcccaa gaccagcttg cggagaatca cgcgcttgag atgcacatga
     8641 taggtcagct tgcgcacggt gggcaggacc atgccggtga acttgacctc gcccacgccc
     8701 aaggcgcgac cgcggcccgg cgccttcatc cagccgagga agaagcccac gagttgccat
     8761 agggcgtcga gaggcaggca tcccggcatc accgggtcgc ctttgaaatg gcaggcgaag
     8821 aaccacagct ccggcttgac gtcgagttcg gccacgacct cgcccttgcc gaattgcccg
     8881 ccggtatcgt cgatcttcac gatacggtcg aacatcagca tcggtggcaa gggcagctgc
     8941 gcgttccccg gcccgaacag gtgcccccgg gcgcattcga tcaggtcctc gaaggtgtaa
     9001 ctgtgcttct tctcgctcac tcttaccgtc ccgcggccca tccaaaacag gaatcggcgg
     9061 cagaataggg atgcccgccg cccagcgcaa accggccaaa ccggctggcc gggccttttc
     9121 acggcccgcc atagtcctta catatgggct gagcgatgcc cggaaccacc cccgatttta
     9181 ccgctcgcct gcgtgccgcg ggcttgcgcc cgacccgcca gcgggtggct ttggcgcgcc
     9241 tgctgttcga aggcggccat cgccatgtca cggccgaagg cctgcatgcc gaagtccggg
     9301 ccacgcgcat gccggtgtcc ctggccacgg tctacaacgc gctgaaccag tttcgcgatg
     9361 ccgggctttt acgcgaagtc gtggtggcac ccggccggtc ttatttcgac accaacaccg
     9421 gccatcacca tcatttcttc gtcgagccgg acggcgagct gcacgacttc ccatccgata
     9481 aggtgaccat cgccggcctg ccgacaccgc ccaagggcac gcggctcagc cgggtcgatg
     9541 tcatcgtgcg ggtgcgccgt tagcgtcgtt gctgcgaatc gtttgcagtt tttagaacgg
     9601 ttctaaacaa cttgacggga ttggggccgc tacccaatat ccgtttgcca gatcgaccga
     9661 gggcccgatc gcaaagcatg agggagtaga accgtggcca atctcaaagg atccaaaacc
     9721 gaggacaatc tgaaggctgc ttttgccggc gagagccagg cgaaccgccg ctatctctac
     9781 tttgcccaaa aggccgacgt cgaaggctac aacgacgtcg ccgccgtctt ccgctcgacg
     9841 gccgaaggcg agaccggcca cgcccatggc catctcgagt tcctcgaagt gagcggcgac
     9901 ccggcgaccg gcctgccgat cggcgccacg acatccaacc tcaaggcggc gatcgcgggc
     9961 gagacgcacg aatacaccga catgtatccc ggcatggccc gcaccgcgcg cgaggaaggc
    10021 ttcgccgaaa tcgccgattg gttcgagacg ctggccaagg cggagaagag ccacgccggc
    10081 cgcttccaaa aagcgctcga tacgatggcg taagccctcg cggctttacc aaggggaccc
    10141 ggctcgggtc ccctttttcg tccgacccga caaagaaaga agcggcacaa gatgcgcgaa
    10201 ggcagcctgg aagcccctac ccgccatgcc ctggattggc agaacccgtg gttctgggac
    10261 gaaaaggcgc tcgagaagga gatggagcgc gtcttcgaca tctgccacgg ctgccgccgc
    10321 tgcttcaatc tctgcgattc cttcccgcgt ctgttcgacc tgatcgacaa cggcccgacc
    10381 ggcgaactcg acggggtgaa aaagcaggac tacggccggg tcgaagcggc ctgcacgctg
    10441 tgcgacatgt gcttcatgac caagtgcccc tacgtgccgc cgcacgagtt cgcgctcgat
    10501 ttcccccatc tcatgctgcg ctaccgggcg gccgagcagc gaagcggcgg cggcgccgcg
    10561 atccagcggc agctcgccaa gaccgaccgc aacggcaagc tggccgggct gg
//
LOCUS       DASWGA010000696         3235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_716224, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000696 DASWGA010000000
VERSION     DASWGA010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3235
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_716224"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..984
                     /locus_tag="VF991_16280"
     CDS             <1..984
                     /locus_tag="VF991_16280"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX9558053.1"
                     /translation="TYGSPEIRAITVASGRFYRHPPQGFADHPLLAPRGALIAGRADQ
                     QAALQQAAADYARLVPSVRWLDAAEVLGRQPLLKPEAAAGGAIFEPEADDMDVAAIHG
                     GFLKGARAAGAVLRLNAEVAALERGNDRWSIRLRDGASITARTIVNAAGAWADVVAQL
                     AGAAPVGLVPKRRTAFTFDAPAGIDLARLPMVIDFDETWYIKPEVGQFLASPADETPS
                     PPCDVQPEEIDIAVAVERIETATTLKIRRIKNKWAGLRSFVADKNLVVGYDAAVAGFF
                     WLAGQGGYGIQTGEAAGRLAASLARGKGLPQDIADLGVGEAALSPRRFTRR"
     gene            1106..1342
                     /locus_tag="VF991_16285"
     CDS             1106..1342
                     /locus_tag="VF991_16285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558054.1"
                     /translation="MTRKTLIATATAIFAAGSFATSAHAAGVKCGGVNSCKGTSACKT
                     ASSACKGQNACKGQGWTETTDVVSCNAQGGKVMQ"
     gene            1690..1929
                     /locus_tag="VF991_16290"
     CDS             1690..1929
                     /locus_tag="VF991_16290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558055.1"
                     /translation="MKKSLVIAAASVFAAGTLAAAQAQAQATNHCVGVNACKGQSACK
                     SASNACKGQNACKGQGWVQTGTTLECTAIGGRPQP"
     gene            2111..2335
                     /locus_tag="VF991_16295"
     CDS             2111..2335
                     /locus_tag="VF991_16295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558056.1"
                     /translation="MTKRTVFATAAAVFAVSTFAAAAHADYTCAGANACKGQSACKSG
                     ASSCKGQNACKGQGFVVTGSSLECTVIKSK"
     gene            2636..2899
                     /locus_tag="VF991_16300"
     CDS             2636..2899
                     /locus_tag="VF991_16300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003614259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558057.1"
                     /translation="MQKKIIIASAAALFAAGTIAASAQTIQSPSGSGTVNKDCKGVNA
                     CKGQSACKSASNACKGQNACKGKGWLSVGSTIECSVLQQNPPK"
     gene            2992..>3235
                     /locus_tag="VF991_16305"
     CDS             2992..>3235
                     /locus_tag="VF991_16305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HEX9558058.1"
                     /translation="MASTEIGFGLGLRPEHYEEIAASPGRVSWFEALSENYMVPGGKP
                     LYWLDTFRRDYPMALHGVSLSIGSIDPLDRRYLDDLK"
BASE COUNT          589 a         1048 c         1069 g          529 t
ORIGIN      
        1 acctatggca gccccgagat ccgcgccatc acggtggcgt cgggccgctt ctaccgccat
       61 ccgcctcagg gctttgccga ccatccgttg ctcgcgccgc gcggcgcgct gatcgccggc
      121 cgcgccgacc agcaggccgc cctgcagcag gccgccgccg actatgcgcg cctggtgccg
      181 agcgtgcgct ggctcgacgc ggcggaggtg cttggccgcc agccgctgct caagcccgag
      241 gcggcggctg gcggcgcgat cttcgagccc gaggccgatg acatggacgt cgcggcgatc
      301 catggcgggt tcctgaaggg tgcgcgcgcc gcgggcgccg ttctgcgcct gaatgcggag
      361 gtcgccgcct tggagcgcgg caacgaccgt tggtcgatcc gattgcgcga cggcgcgagc
      421 atcaccgcgc gaaccatcgt caacgcggcg ggcgcctggg ccgacgtcgt ggcgcaactc
      481 gcgggtgccg caccggtcgg cctggtgccc aagcgccgca cggccttcac cttcgatgcg
      541 ccggccggca tcgatctcgc gcgcctaccg atggtcatcg acttcgacga aacctggtac
      601 atcaagcccg aagtcggaca gttcctcgcg tcgccggccg acgagacgcc ctcgccgccc
      661 tgcgatgtcc agcccgagga gatcgacatc gccgttgcgg tcgaacgcat cgagacggcg
      721 acgacgctaa aaatccgccg catcaagaac aagtgggcgg gtctcaggag cttcgttgcc
      781 gacaagaacc tggtggttgg ctacgatgcc gcggtcgccg gtttcttctg gctggcgggc
      841 cagggcggct atggcatcca gaccggcgag gctgccgggc ggctggcggc aagcctggca
      901 cggggcaaag gcttgccgca ggacatcgcc gacctcggtg tcggcgaggc tgctctttca
      961 ccgcgccgtt tcacgcgacg gtgatcggaa gatcacgccg catcgccaag gacttacttc
     1021 acggtgagtg cgccgggagg catggtcgtc gcgtgaagac gccatccggc gcttcacggg
     1081 agaaatccac caagggagcg acccaatgac cagaaagacc ctcattgcga cggcaacggc
     1141 gatcttcgct gccggcagct tcgccacgtc ggcccatgcc gccggcgtca agtgcggcgg
     1201 cgtcaactcg tgcaagggca ccagcgcctg caagactgcc tcgtcggcct gcaagggcca
     1261 gaatgcctgc aagggccagg gctggacgga gacgaccgat gtcgtgagct gcaacgctca
     1321 aggcggcaag gtgatgcagt agggtcggcg tcgctcacca agcgagacgg gcgctgcgag
     1381 tgactgcgag tggctgcgag tgatcgcagc ggatcgcagc gcccgcttca tttgcggatc
     1441 aggtctacgt cgacgatgca tcgccgctga attctcaacg acaggctcgg caaaaaccgc
     1501 gcatatgcgc ggcttgcgca attcatcgaa actgtaggtg cgccgcacct acactttctg
     1561 ttgaaccgcc cgcacgggca cgcggccttc aacccaaagc agcaatggac cagggtcggc
     1621 gcacggacgc cggggcgtcc gctgcgccgc aggagacggc gcaggtaatg cactgaggga
     1681 gtacatggga tgaagaagtc gctcgtgatc gccgcggcat cggtgtttgc cgccggcacg
     1741 cttgccgctg cccaagcgca ggcccaagcc accaatcact gcgtcggtgt caacgcctgc
     1801 aagggccaga gcgcgtgcaa gagcgcgtcg aacgcctgca agggtcagaa tgcctgcaag
     1861 ggccagggct gggtgcagac cggaaccacg ctcgagtgca ccgcgatcgg cggtcgcccg
     1921 cagccttagt ctcaggaacc gctgaacgaa aaacagaggc atcgcgggca accgcggtgc
     1981 ctttcgctca ccaaagcgtg acctccttgg attgatcggg cgccgggcaa cccgcgtaag
     2041 cgggatgcag gctgaatcct gcagcatcgg cgtatcgccg ttgcgccgcc aaccagggag
     2101 atcctcagct atgaccaagc gtaccgtgtt cgcgactgct gccgccgttt tcgccgtcag
     2161 cacgttcgct gccgccgccc acgccgatta cacctgcgcc ggcgccaacg cctgcaaggg
     2221 ccagagcgcc tgcaagagcg gggcgtcgtc ctgcaagggc cagaacgcct gcaagggcca
     2281 gggcttcgtc gtaacgggca gctcgctcga gtgcaccgtg atcaagtcga agtaaaaatt
     2341 aactggctcc tttcggggga caagccggcg ggtgtctcgg caaaccgtgg cacctgccgc
     2401 ctttgtgcat tctcggcgat tggtatttcc gtcttgcggc ctttctgatc aaggcaatca
     2461 ccggggccgc ctcgactccg tttcgttgtt tgcaatcgta cacatggagt gcttttgctg
     2521 tttgactgaa tttgcctctt gagtgattcc gctgaccggt acatgctctc gcggttcgaa
     2581 cggcaaaaaa aggccagttc ggacataaga ggggacatat cagggagagc attcaatgca
     2641 gaagaaaatc atcatcgcga gcgcagcagc cctgtttgca gccggcacga ttgcggccag
     2701 tgcacagacg atccaaagcc ccagtggctc ggggacggtc aacaaagact gcaagggcgt
     2761 gaacgcctgc aagggccaga gcgcctgcaa gtccgccagc aacgcctgca agggccagaa
     2821 tgcctgcaag ggcaagggct ggctttcggt tggctcgacg atcgaatgca gcgtgttgca
     2881 gcaaaatccg ccgaagtgaa caccggctgc cggccctccg ggtcggtgct ggaaagcggg
     2941 cgccccgagc gatcggcggc gcccgtcttc ttttcgcggt agagtagcgc catggcttcg
     3001 accgagatcg gcttcggcct ggggctccgg cccgaacatt atgaggagat cgccgccagc
     3061 cccggacggg tgagctggtt cgaggcgctg tcggagaact acatggtgcc gggcggcaag
     3121 ccgctttact ggctcgacac cttccggcgc gactatccga tggcgctgca cggcgtgtcg
     3181 ctctcgatcg gctcgatcga tcccctcgat cggcgctatc tcgacgatct caagg
//
LOCUS       DASWGA010000697         2119 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_207015, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000697 DASWGA010000000
VERSION     DASWGA010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207015"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VF991_16310"
     CDS             complement(<1..394)
                     /locus_tag="VF991_16310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558059.1"
                     /translation="MRQLASSKIRRRSLLKTGAAATGFAAAGLLPAGGFAQAKSQTVN
                     LQLGWLAGNNQVGEVAAKHLGYFEEEKLNLVIQPGGPSIDGVAIVASGRHEIGQVSSS
                     PSLMLAASQKIPVMCFATGLQQHPYAYFS"
     gene            516..1475
                     /locus_tag="VF991_16315"
     CDS             516..1475
                     /locus_tag="VF991_16315"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX9558060.1"
                     /translation="MHAAVLRYFDHVARHGSIRKAADALSVASSAVNRQILRLEDEMG
                     VALFERGRSGVRPTAAGELLLRHVRETQNEYQRTRAEIASLGGTVSGDVRIISLESLL
                     VRFLPQAVDEMSARHPEVSFTVLAVHPGEIGEALRSGDNDFGVLFVDNRHRGVDVIAE
                     FPTAVGALMRPDHPLAGRKTLTLTECVGHPVVMLQDRWLLDAIMATEFADSGARLSPR
                     IVSNSIEFMRQVIKSGLGIGFFTPIGFIEEIRRGELVHIPLAEPGLAQSRIGILVPRY
                     RRLSPPARLMIDHISERLRAFGDFLAAPPRRPAKRGARPRSRT"
     gene            1477..>2119
                     /locus_tag="VF991_16320"
     CDS             1477..>2119
                     /locus_tag="VF991_16320"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9558061.1"
                     /translation="MGLVLGGGAVLTVNGANELWPAADIRIEGQTIAAIGAADSLARP
                     GDTLIDCSETLITPGLVNVHTHAATAFYRGMAEDRPREFWSAGYAMPGQERFTVEDHV
                     FSVRAACAEFLLNGVTCIADRLGNMDRIAPAIEESGIRAVVGHSLVDAKAPADWKGAS
                     AVLERFGTDPRRRVFAGIAPHALDTCSDELLKECARRADRTGARVFLHVAQNEP"
BASE COUNT          315 a          731 c          728 g          345 t
ORIGIN      
        1 gcgagaaata ggcgtaggga tgctgctgca ggccggtggc gaagcacatc accgggatct
       61 tttgcgacgc cgccagcatc agcgaggggc tggacgatac ctggccgatc tcgtgccggc
      121 ccgaggcgac gatggccacg ccgtcgatgc tgggcccgcc gggctggatc acgaggttga
      181 gcttctcctc ctcgaagtag ccgaggtgct tggcggcgac ctcgcccacc tgattgttgc
      241 cggcgagcca gccgagctgg aggttgacgg tctggctctt ggcctgggcg aaaccgcccg
      301 ccggcaggag gcccgcggcg gcgaagccgg tggcggcagc gccggttttg agcaatgagc
      361 ggcggcggat cttgctggac gcgagctggc gcatggtgac ttccccttcg tcgttccccg
      421 tgccaacgct attgacgccg ggtgctctag aaaagaacat taattcgcgc ggcgcgctgc
      481 catttgggca tcgcccgcgg acgaggcaaa acgacatgca tgcggccgtc ctgcgttatt
      541 tcgaccatgt tgcgcgccac ggctcgatcc gcaaggcggc cgatgcgctg agcgtggcct
      601 cctcggcggt caaccgccag atcctgcggc tggaggacga gatgggggtg gcgctgttcg
      661 agcgcggtcg cagcggcgtg cgcccgacgg cggccggcga gctgctgctg cgccatgtcc
      721 gcgagaccca gaacgagtac cagcgcacgc gcgccgagat cgccagcctg ggcggcacgg
      781 tgagcggcga cgtccgcatc atctcgctgg aatcgctcct ggtgcgcttc ctgccgcagg
      841 cggtcgacga gatgtcggcc cgccatcccg aggtgagctt caccgtgctc gccgtccatc
      901 ccggcgagat cggcgaggcg ctgcgctcgg gcgacaacga tttcggcgtg ctgttcgtcg
      961 acaaccgcca ccgcggcgtc gacgtgatcg ccgagttccc gaccgccgtc ggcgcactga
     1021 tgcggcccga ccatcccctg gccgggcgca agacgctgac gctcaccgaa tgcgtcggcc
     1081 atccggtggt catgctccag gaccgctggc tgctcgatgc catcatggcg acggagttcg
     1141 ccgactcggg cgcgcgtctg tcgccgcgta tcgtctccaa ctccatcgag ttcatgcgcc
     1201 aggtgatcaa gtcggggctc ggcatcgggt tcttcacgcc gatcggcttc atcgaggaaa
     1261 tccgccgcgg cgaactggtg cacatcccgc tggccgagcc gggcctggcg caaagccgca
     1321 tcggcatcct ggtgccgcgc tatcgacgac tgtcgccgcc ggccaggctg atgatcgacc
     1381 acatcagcga gcggctgcgt gccttcggcg atttcctggc cgcgccaccc cgtcgccccg
     1441 ccaagcgcgg cgcgcggccg cggagcagga cctgacatgg ggctcgttct tggcggcggc
     1501 gcggtcctga cggtcaatgg cgccaacgag ctctggccgg ccgccgacat ccgcatcgag
     1561 ggtcaaacca tcgccgccat cggcgcggcc gacagcctgg cgcggcccgg cgacacgctg
     1621 atcgattgca gcgagacgct gatcacgccg ggcctggtca acgtccacac ccatgccgcg
     1681 accgccttct atcgcggcat ggccgaggac aggccgcgcg aattctggtc ggcgggctac
     1741 gccatgcccg gccaggagcg cttcacggtg gaggatcacg tcttttccgt gcgcgccgcc
     1801 tgtgcggagt tcctgctgaa tggcgtcacc tgcattgccg accgcctcgg caacatggat
     1861 cgcatcgcgc cggccatcga agagtcgggc atccgtgccg ttgtcggcca ctctctcgtc
     1921 gacgccaagg cgccggcgga ctggaagggt gccagcgccg tgctcgaacg tttcggcacc
     1981 gatccgcgcc gccgcgtgtt cgccggcatc gccccgcacg cgctggatac ctgctccgac
     2041 gagcttttga aagagtgcgc gcggcgggct gacaggacag gcgcgcgggt cttccttcat
     2101 gtcgcgcaaa acgagcccg
//
LOCUS       DASWGA010000698         1834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1850155, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000698 DASWGA010000000
VERSION     DASWGA010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1834
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1850155"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..836)
                     /locus_tag="VF991_16325"
     CDS             complement(<1..836)
                     /locus_tag="VF991_16325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9558062.1"
                     /translation="MRKRSLDMVHALARRDERVVFIGSDLSPNLLGEMKKEYPSRYYM
                     EGISEANIIGMAAGMAMDGFIPYVNTIATFITRRCYEQVAVDLCLHDLPVRLIGNGGG
                     YVYAPLGPTHQAIEDIAIMRALPHMTVTAVCDAEEMTRLMNATLDWPHPVYIRLGKGG
                     DPVVSKPERGFAIGKAIDMIDGEQGACDVLLVATGVATTQALKAAGALAADGIRCRLL
                     HVHTVKPLDGDAIVDAATRTRLVVTVEEHTVVGGLGSAVLEALSDRIAGSLPPLKRLG
                     IP"
     gene            complement(854..1714)
                     /locus_tag="VF991_16330"
     CDS             complement(854..1714)
                     /locus_tag="VF991_16330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX9558063.1"
                     /translation="MNDAALLNYGTDLDLVQLEPLDERSRYLRRLIFRAIENGGRGHI
                     GPALSLVEIIRVLYDDFLRHRPAEPRWRDRDRFILSKGHGCLALYAVLADRGFFPVEE
                     LDRFCHFDSFLGGHPETVAPGVEACTGALGHGLSIGLGMALAARMTGRDSKVYVLMGD
                     GEINEGSVWEAAACADKHRLSNLTAIIDYNKIQSAGSVFDIQSMEPLADKWTSFGFRV
                     FECNGHNVGDLRQVFRNAAAATSDRPRAIICHTVKGKGIPVAENNAAWHHKSDLSDSD
                     LRAIRGALGN"
BASE COUNT          312 a          585 c          605 g          332 t
ORIGIN      
        1 tcggggatgc cgagacgttt tagcggcggc aacgagcccg cgatccggtc ggaaagcgct
       61 tccagcaccg cgctgcccaa gccgcccacg acagtgtgct cttccaccgt gaccaccagg
      121 cgcgtcctgg tggccgcatc gacgatggcg tcaccatcga gcggctttac cgtatggaca
      181 tgaagcagac ggcaacggat gccgtcggcc gccagcgcgc cggcggcctt gagcgcctgc
      241 gtcgtcgcaa cgccggtggc gaccagcagc acgtcgcaag cgccctgctc gccgtcgatc
      301 atgtcgatcg ccttgccgat tgcgaaccca cgctcgggct tgctgacgac gggatcgccg
      361 cctttgccca ggcggatata gaccgggtgc ggccagtcga gcgtcgcgtt catcaggcgg
      421 gtcatttcct cggcgtcgca cacggcggtg accgtcatgt gcggcagggc gcgcatgatg
      481 gcgatgtcct cgatcgcctg gtgggtcggg ccgagcggcg catagacata gccgccgcca
      541 ttgccgatca gccgcaccgg caggtcgtgc aggcagagat cgaccgccac ctgctcgtag
      601 cagcgccgcg tgatgaaggt ggcgatggtg ttgacgtagg ggatgaagcc gtccatcgcc
      661 atgccggccg ccatgccgat gatgttggct tcgctgatgc cctccatgta gtagcgcgac
      721 ggatattcct tcttcatctc gccaagcagg ttgggcgaca gatcggagcc gatgaacacc
      781 acgcgctcgt cacggcgggc gagcgcgtgg accatgtcga ggcttcgctt gcgcatgatc
      841 tcagcttccc aattcagttt ccgagcgcgc cgcgaatggc gcgcaagtcg ctgtccgaaa
      901 ggtccgactt gtgatgccag gcggcgttgt tctcggcgac cgggatgccc ttgcccttga
      961 ccgtgtggca gatgatggcg cgcggccgat cgctcgtcgc cgccgctgcg ttacggaaaa
     1021 cctgccgcaa atcacccacg ttgtgaccgt tgcactcgaa cacgcgaaag ccgaagctcg
     1081 tccacttgtc ggcgagcggc tccatgctct ggatgtcgaa gacgctgccg gcggactgga
     1141 tcttgttgta gtcgatgatc gccgtcaggt tggacaggcg atgcttgtcg gcgcaggcgg
     1201 ccgcttccca gaccgaccct tcgttgatct cgccgtcgcc catcagcacg tagaccttgc
     1261 tgtcgcggcc ggtcatgcgc gccgccaggg ccatgccgag gccaatggaa agcccgtggc
     1321 cgagggcgcc cgtgcaggct tcgaccccgg gagcgacggt ttccgggtga ccgcccagga
     1381 acgaatcgaa gtggcagaag cggtcgagtt cctcgactgg aaagaagccg cgatcggcca
     1441 gcaccgcgta gagcgccagg cagccatggc ccttgctcag gatgaagcgg tcgcgatcgc
     1501 gccagcgcgg ctcggcgggc ctgtggcgca ggaagtcgtc gtagaggacg cggataattt
     1561 caaccagcga gagtgccggg ccgatatggc cccgcccacc attctcgatg gcccggaaaa
     1621 tcagccgccg gagatatcgg ctgcgctcgt ccaggggttc gagctggacc aaatcgaggt
     1681 cggtgccata gttcaacaac gccgcatcat tcatgtgggt cgttatacta tctccgttga
     1741 tctcagtcag cccatttggc tggcccagtg gtaccccttg tcgcgggtcg gtatgagcga
     1801 ggcccacctc ggtttgcaac tgatcgtgat gtgg
//
LOCUS       DASWGA010000699         4440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2358275, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000699 DASWGA010000000
VERSION     DASWGA010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4440
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2358275"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..686)
                     /locus_tag="VF991_16335"
     CDS             complement(<1..686)
                     /locus_tag="VF991_16335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9558064.1"
                     /translation="MNQGTSIPLIEAAEVSKRFAGRLGRESTLALAGLSLAIDAEKPS
                     IIAVVGESGSSKTTLARLLLGLAEPSGGEVRYRGTDLRRLGHADRLAFRRDVQAIFQD
                     PYGVYNPFYRVDHVLWTPVRRFRLAGTRAAARELIGTALRAVGLRPEEILGRFPHQLS
                     GGQRQRVMVARALLLRPKLIVADEPVSMVDASLRATILGSLSQLKDKHGISILYITHD
                     LATAYQVSDA"
     gene            complement(683..1624)
                     /locus_tag="VF991_16340"
     CDS             complement(683..1624)
                     /locus_tag="VF991_16340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558065.1"
                     /translation="MLEVEGLRVAFAHPRGLVRAVDDVSFSLLPGERFGLAGESGSGK
                     STLALSILRMIRPPGYIEAGDVRFLGAPVAEFDEEGIRALRLAGIALVPQGSMNSLNP
                     VLRIGHQIADALVDHGLRLGRAETEGRIAALLSEVGLPAGVARMYPHELSGGMKQRAC
                     IAIAICLRPKVIIADEPTSALDVVVQRQVMATLARVQRDLGAAVILVGHDMGLMAQFV
                     DRLGVMYAGRLVEVAPIGEIITRPRHPYTRALIASLPSLERRGMLAGIPGLAPSLLEL
                     PAGCAFHPRCGLAVERCRSERPAVRQIEGAEVACHLA"
     gene            complement(1647..2507)
                     /locus_tag="VF991_16345"
     CDS             complement(1647..2507)
                     /locus_tag="VF991_16345"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558066.1"
                     /translation="MRGAVGGVWRYLRRNPSLTLGVALLTALGLFVVIGGLVVDIEDA
                     RPLSVLTLRPPSRDYPFGTDRQGRDLLAVMIAGTPLTLRIGFIAGFLGVGLGTVLAFT
                     AAYYRGLLDTVIRGVADIGLTVPGLLVLIIIAVSIKGTLTVNQMAMVVASLAWLYPTR
                     TIRAQVLSMRERGYVEVARLSGMSGPGIIFFELMPNLLPYLAATLVNSVSAAILASIG
                     LEVLGLGPIDAPTLGMTLYWVNFNAAMINGWWWWWLAPTVVIVTVFLGLFFLTVGLDE
                     IANPRLRRSA"
     gene            complement(2507..3511)
                     /locus_tag="VF991_16350"
     CDS             complement(2507..3511)
                     /locus_tag="VF991_16350"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558067.1"
                     /translation="MHAAYIARRFGVFLLILWLAATLNFFLPRLSGQDPVHAKLLQQA
                     ALGGYVHAGIEEMTQEYERRFGLDQPLWRQYLTYLRDVARLDFNYSIANYPKTVRELV
                     ADAVPWTLALLGTTTLLSFVIGSLLGALLAWPRAPRWMLWLMPPLWALHAIPFFLLGL
                     ILTYLLAFQLPLLPIFGGYSPGATPSFNWRFAWDVFQHALLPALSIILVATGGWALGM
                     RGMMVTTMGEDYVLFAEAKGLRAPTVFLRYCLRNAILPQVTALALALGQILSGAVLVE
                     VIFGYPGIGTLLFQAIRENDHFVIQGVVFIVIVALGLTTFVLDVVYPWLDPRISYRRT
                     "
     gene            complement(3690..>4440)
                     /locus_tag="VF991_16355"
     CDS             complement(3690..>4440)
                     /locus_tag="VF991_16355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558068.1"
                     /translation="IDRQQLVEVGYLGANTPSKLPLPPYLPLAPYFDAVKDLLAKYDT
                     NEFAPKKGDALLQGKGFKKDPDGFWANGEGKRLAVNIIGFGASGPAIGPVLVEMLRRR
                     GVEAGMALPPDFDSRFQKGEYDGAIYGHGGSVNEPYATLRLYQGASIAVPGAHQANFA
                     RWKNANYDKLVDEAYAVAPDDTKKLAEVWRRAMEIWLPELPDIQLVQNIHRIPWNTTY
                     WKNWPTEPHPYVNGAHWHLTFPMVLWSLQTA"
BASE COUNT          835 a         1482 c         1498 g          625 t
ORIGIN      
        1 atcgcatcgc tgacctggta agcggtggcc aggtcatggg tgatgtagag gatcgagatg
       61 ccgtgcttgt ccttcagctg gctcagcgac ccgaggatcg tcgcgcgcag cgaggcgtcg
      121 accatcgaga ccggctcgtc ggcgacgatc agcttgggcc ggagcagcaa cgcccgggcc
      181 accatcacgc gctggcgctg gccgcccgac agctgatgcg ggaaccggcc gaggatctcc
      241 tccggccgca gcccgacggc gcgcagcgcc gtgccgatca gctctcgtgc cgcggcgcgc
      301 gtgccggcca gccgaaagcg ccgcaccggc gtccacagca cgtgatcgac ccggtagaac
      361 gggttgtaga cgccgtaggg gtcctggaag atcgcctgca cgtcgcggcg aaaggccagc
      421 cgatcggcgt gtccgagccg gcgcagatcg gtgccgcggt agcgcacttc gccgccgctc
      481 ggctcggcga ggccgagcag cagccgggcc agcgtcgtct tgctcgagcc gctttcgccg
      541 accacagcga tgatcgacgg cttctcggcg tcaatcgcga gcgacaatcc ggccagcgcc
      601 agcgtgctct cgcgcccgag cctgccggcg aagcgcttac tgacctcggc ggcctcgatc
      661 agcgggattg aagtcccttg gttcatgcca aatggcacgc cacttcggcg ccctcgatct
      721 ggcgcaccgc cggccgctcg ctgcggcagc gctcgaccgc gagcccgcag cgcgggtgaa
      781 aggcgcagcc ggccggcagt tcgagcagcg acggcgccag accggggatg ccggccagca
      841 tgccgcgccg ctccagcgag gggagcgagg cgatcagcgc ccgggtatag ggatggcgcg
      901 gacgggtgat gatctcgcca atcggcgcca cctcgaccag ccgtccggca tacatcacgc
      961 cgagccgatc aacgaactgc gccatcaacc ccatgtcgtg cccaaccagg atcaccgctg
     1021 ccccgaggtc tcgctgcacc cgcgccagcg tcgccatgac ctggcgctgc acgacgacat
     1081 ccaacgcgct ggtcggctcg tcggcaatga tcaccttagg acgcaggcag atcgcgatgg
     1141 cgatgcacgc gcgctgcttc atgccgccgg aaagttcgtg cgggtacatc cgcgccacgc
     1201 cggccggcaa tccgacctcg gacagcaggg cggcaatccg gccctcggtc tccgcacggc
     1261 caaggcgcag cccatgatcg acgagggcat cggcgatctg atgcccgatc cgcagcaccg
     1321 ggttgagcga gttcatcgag ccctgcggca ccagtgcgat gccggcaagc cgcaacgcgc
     1381 ggatgccttc ctcgtcgaat tcggcgaccg gggcgccgag aaagcgcacg tcgccagcct
     1441 cgatatatcc cggcggcctg atcatccgta ggatcgagag tgccagcgtc gacttgccgg
     1501 aaccggattc gccggccaac ccgaaccgct cgcccggcag cagcgaaaag ctgacatcgt
     1561 cgaccgcccg gacgaggccg cgcgggtgcg cgaaggcgac gcgcaagccc tcgacctcca
     1621 gcacgggccc cgtcattgct gaaccatcat gcgctgcgcc tgaggcgcgg attggcgatc
     1681 tcgtcgagcc cgaccgtcag gaaaaacagc ccgaggaaca ccgtcacgat caccacggtc
     1741 ggcgccagcc accaccacca ccagccgttg atcatcgctg cgttgaaatt gacccagtag
     1801 agcgtcatgc cgagcgtcgg cgcgtcgatc gggccgaggc cgagcacctc gaggccgatc
     1861 gaggcgagga tcgccgccga caccgagttg accagcgtcg ccgcgagata gggcagcagg
     1921 ttcggcatca actcgaaaaa gatgatgccg gggccgctca tgccggagag ccgcgccacc
     1981 tcgacgtagc cgcgctcgcg cattgacagc acctgggcgc ggatcgtgcg ggtcgggtag
     2041 agccaggcga gcgaggcgac gaccatcgcc atctggttca ccgtcagcgt tcccttgatc
     2101 gagacggcga tgatgatcag caccaggagg cccggcacgg tcagcccgat atcggcgacg
     2161 ccgcggatca cggtgtcgag cagaccgcga taataggcgg cggtaaacgc cagcaccgtg
     2221 ccgagcccga cgccgagaaa gccggcgata aagccgatgc gcagggtcag cggcgtgccg
     2281 gcgatcatca ccgccaagag gtcgcggccc tgccggtccg tgccgaacgg gtaatcccgc
     2341 gatggcggcc gcaatgtcag aaccgacagc gggcgcgcat cctcgatatc caccaccagg
     2401 ccgccgatca cgacgaacag gccgagcgca gtaagcaggg cgactccgag cgtcagcgac
     2461 gggttgcgtc gcagatagcg ccaaactccg ccgacagcgc cgcgcatcac gtccggcgat
     2521 acgaaatgcg ggggtcgagc cagggataga ccacgtcgag cacgaaggtg gtcaggccga
     2581 gcgctacgat gacgatgaag acgacgccct ggatgacgaa atggtcgttc tcgcggatcg
     2641 cctggaacag caaggtgccg atgccgggat agccgaagat gacttcgacc agcacggcgc
     2701 cggacaggat ctggccgagc gccagcgcca gggccgtcac ctgcggcagg atcgcgttgc
     2761 gcaggcaata gcgcaggaac acggtcggcg ccctgaggcc cttcgcttcg gcgaagagga
     2821 cgtaatcctc gcccatcgtc gtcaccatca tgccgcgcat gccgagcgcc cagccgccgg
     2881 tcgccaccag gatgatcgac aaggccggca agagcgcgtg ctggaacaca tcccaggcga
     2941 aacgccaatt gaaggagggc gtggcaccgg gcgaatagcc gccgaagatc ggcaacagcg
     3001 ggagctggaa agccaagagg taggtcagga tcaatccgag cagaaaaaac gggatcgcgt
     3061 gcaatgccca tagcggcggc atcagccaca acatccagcg cggcgctcgc ggccaggcga
     3121 ggagcgcgcc caagaggctg ccgatgacga acgacagcaa tgtcgtcgtg ccgaggaggg
     3181 ccagggtcca gggcacggcg tcggccacca actcgcgcac cgtcttcggg tagttggcga
     3241 tcgaatagtt gaagtcgagc cgcgccacgt cgcgcagata ggtcaggtat tgccgccaca
     3301 gcggctggtc gaggccaaag cggcgctcgt attcctgcgt catctcctcg atgccggcgt
     3361 ggacgtagcc gccaagcgcc gcctgctgca acagcttggc gtgcaccggg tcctgcccgg
     3421 agaggcgcgg cagaaagaag ttcagcgtcg cggcgagcca gaggatcagc agaaagaccc
     3481 caaagcggcg cgcgatatag gcggcgtgca tcgctcagag attatcccct ctccgccctt
     3541 caggggggag aggggggggc ccatcgcgaa gcgatgggag ggtgaggtgg gtgtcggcga
     3601 gcgctctgga atcccccacc tcaccccatc cctctccgcc cccgggggcg gagagggggt
     3661 aaaatgcgcg cctcaactgc atgactggtt cacgccgttt gcaggctcca cagcaccatc
     3721 gggaaggtca ggtgccagtg ggcgccgttg acataggggt gcggctcggt cggccagttc
     3781 ttccagtagg tggtgttcca ggggatgcgg tggatgttct gcacgagctg gatatcgggc
     3841 agttcgggca gccagatctc catcgcgcgg cgccagacct ccgccagctt cttggtgtcg
     3901 tccggcgcga cggcgtaggc ctcgtcgacc agcttgtcgt aattggcgtt cttccagcgc
     3961 gcaaaattcg cctggtgcgc gccgggcacc gcgatcgacg cgccctgata gagccgcaat
     4021 gtcgcgtagg gctcgttgac cgagccgcca tggccgtaga tcgcgccgtc gtactcgcct
     4081 ttctgaaagc ggctgtcgaa atcgggtggc aaggccatgc cggcctcgac gccgcggcgc
     4141 ctgagcatct cgaccaacac cgggccgatc gccggccccg aggcaccaaa gccgatgatg
     4201 ttgacggcga ggcgcttgcc ctcaccgttc gcccagaagc cgtcgggatc cttcttaaag
     4261 cccttgccct ggaggagagc gtcgcccttc ttcggggcaa attcgttggt gtcgtatttg
     4321 gccaacaggt ccttcaccgc atcgaaatac ggcgcaagcg gcagataggg tggcagcggc
     4381 agcttcgagg gcgtgttggc cccgagatag ccgacctcga ccaattgctg gcggtcgatg
//
LOCUS       DASWGA010000700         2104 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_80211, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000700 DASWGA010000000
VERSION     DASWGA010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80211"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..164
                     /locus_tag="VF991_16360"
     CDS             <1..164
                     /locus_tag="VF991_16360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX9558069.1"
                     /translation="VAREGKSLTRAELDKLCLDNIARFKRPKDYKFVDALPKNNYGKI
                     LKTELRKLL"
     gene            191..850
                     /locus_tag="VF991_16365"
     CDS             191..850
                     /locus_tag="VF991_16365"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9558070.1"
                     /translation="MGSMIDFKRPDGSTCKGYLAEAGKDKPGIVVIQEWWGLNDQIKG
                     VADRFAAAGYNALAPDLYKGRVTQKPDEANHMMSGLDFVGASDQDIAGAVKHLTGMSR
                     KVGVMGFCMGGALTIAAAARVPGVACGVPFYGVPPGELADPAKIKIPIQGHFANKDDW
                     CTPQVVNDFEKKMAAAGNKPEIYRYDAAHAFANEKSAAYDAPSAKQAWERMMVFLGRH
                     L"
     gene            918..>2104
                     /locus_tag="VF991_16370"
     CDS             918..>2104
                     /locus_tag="VF991_16370"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558071.1"
                     /translation="MTSPALGLAIVGLGASLAPLDIAVNVALPAITSHFRVALGDAQW
                     LVICYVLVYGSLMLVCGKLGDLFGHRLIFRIGLLISALGCAACAAAPDWPLFLWARAG
                     QGVGTALALACTPALATSLFPESARIRALAGFGMAMSLAAAIGPFLGGVLVELWGWPA
                     VYWVRVPIALAALALSGLLPSPKLDQRPFDAVGAVLLAACMSILLLSLVLSQRPEIAA
                     VWPAVLFAAALVLVAAYVRRSNRVPEPIIRPVLFADPAFSVPNVMYVLANLAGFAILL
                     LTPYYLANVLRLSAFMTGLVLALAFAGGLSGAPLSALLVRRIGQRPTAFAGTALVGLG
                     LLPLAFTGATTPLAWVGLLLIVEGLGQGLLSVAYTDMVTATLAPRDRGVAGSLALLTR
                     TLG"
BASE COUNT          301 a          718 c          705 g          380 t
ORIGIN      
        1 tggtggcgcg cgagggcaag agcctgacgc gcgccgagct cgacaagctc tgcctcgaca
       61 acatcgcccg cttcaagcgg ccgaaggact acaagttcgt ggatgcattg cccaagaaca
      121 actacggcaa gattctcaag acggagctgc gcaagctgct ttaggctggt ggcataagga
      181 ggaggaaaag atgggcagca tgatcgattt caagcgtccc gatggatcga cctgcaaggg
      241 ctacctggcc gaggcgggca aggacaagcc gggcatcgtc gtcatccagg aatggtgggg
      301 gctcaacgac cagatcaagg gcgtcgccga ccgcttcgcc gccgccggct acaacgcgct
      361 ggcgcccgac ctctacaagg gccgcgtgac ccagaagccg gacgaggcca accacatgat
      421 gagcggcctc gatttcgtcg gcgcctccga ccaggacatc gccggcgcgg taaaacatct
      481 caccggcatg agccgcaagg tgggcgtgat gggcttctgc atgggtggcg cgctcaccat
      541 cgctgcggcg gcgcgcgtgc cgggcgtcgc ctgcggtgtg ccgttctacg gcgtgccgcc
      601 gggcgagctc gccgatccgg cgaagatcaa gatccccatc cagggccact ttgccaacaa
      661 ggacgattgg tgcacgccgc aggtcgtgaa cgacttcgaa aagaagatgg ctgcagccgg
      721 caacaagccg gagatctacc gctacgatgc cgcacacgcc ttcgccaacg agaagagtgc
      781 ggcctacgac gcgccctcgg ccaagcaggc gtgggagcgc atgatggtgt ttttgggtag
      841 acacctctag gtgacatccc gagcgtagcg agggaccttt gcggtatcct aaaggtccct
      901 cggccttcgg cctcgggatg acatctcccg ctttgggcct tgccatcgtc ggcctgggcg
      961 cctccctggc gccgctcgac atcgccgtca acgtggcgct gcccgccatc accagccatt
     1021 tccgcgtcgc cctgggcgac gcgcagtggc tggtgatctg ctacgtgctg gtctacggct
     1081 cgctgatgct ggtgtgcggc aagctgggcg atctgttcgg ccatcgcctg atcttccgca
     1141 tcggcctgct gatctccgcg cttgggtgcg ccgcctgtgc cgccgcgccc gactggccgt
     1201 tgttcctgtg ggcgcgcgcc ggccagggcg tcggcacggc gctggcgctc gcctgcacgc
     1261 cggcgctggc gacgtcgctg tttcccgaaa gcgcgcgcat cagggcgctg gcgggattcg
     1321 gcatggcgat gtcgttggcc gccgccatcg gaccattcct gggcggcgtg ctggtcgagc
     1381 tctggggctg gccggcggtc tactgggtgc gcgtgccgat tgcgcttgcc gcgctggcgc
     1441 tgtccggcct gctgccgtcg cccaagctcg accagcgacc gttcgacgcc gtcggcgcgg
     1501 tattgctggc cgcttgcatg agcatcctgc tgctgtcgct ggtgctctcg caacgcccgg
     1561 agatcgccgc cgtttggcca gccgtcctgt tcgcggcagc gctcgttctc gtcgccgcct
     1621 acgtgcggcg gtcgaaccgg gtgcccgaac ccatcattcg gcccgtcttg ttcgccgatc
     1681 cagctttcag cgtgcccaac gtcatgtatg tcctcgccaa cctggcgggc ttcgccatcc
     1741 tgctgctgac gccctactat ctcgcgaacg tgctgcggct ctcggccttc atgacaggcc
     1801 tggtgctggc gctcgccttt gccggcggcc taagcggcgc gcccctctcg gccttgctcg
     1861 tgcgccgcat cggccagcgg ccgacggctt tcgccggcac agcactggtc gggctgggcc
     1921 tgttgccgct cgccttcacc ggcgcgacca cgccgctggc gtgggtcgga ctgctgctga
     1981 tcgtcgaagg cctgggccag ggcctgctgt cggtggccta caccgacatg gtgaccgcca
     2041 ccctggctcc gcgtgatcgc ggcgtcgcgg gcagcctggc gctgctgacg cgcaccctgg
     2101 gcat
//
LOCUS       DASWGA010000701        10683 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_717005, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000701 DASWGA010000000
VERSION     DASWGA010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10683
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_717005"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1033)
                     /gene="pgi"
                     /locus_tag="VF991_16375"
     CDS             complement(<1..1033)
                     /gene="pgi"
                     /locus_tag="VF991_16375"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020629191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEX9558072.1"
                     /translation="MTAPALRKRSAWVALEKHYQEMKGVHLRQLFAEDGKRGERLAVE
                     AAGIYLDYSKNRITDQTLRLLLQLAQECGLRDRIDAMFRGDKINVSEKRAVLHVALRA
                     PRGASILHDGRNVVPDVHAVLDKMADFSNRVRTGAWKGHTGKPIRNVINVGIGGSDLG
                     PVMAYEALKHYSERAMTFRFVSNVDGSDFAEAVQDLDPAETLFIISSKTFTTLETMTN
                     AHTARDWLLAGLNGESAATAKHFVAVSTNGQEVAKFGIDTANMFGFWDWVGGRYSMDS
                     AIGLSTMLAIGPDNFRAMLDGFHQMDEHFRTAPFERNLPVLMGLLSLWYNDFFGAQTV
                     AVLPYEQYLK"
     gene            complement(1058..2143)
                     /gene="tal"
                     /locus_tag="VF991_16380"
     CDS             complement(1058..2143)
                     /gene="tal"
                     /locus_tag="VF991_16380"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEX9558073.1"
                     /translation="MKATRTLHDLGQSLWLDNITRDLLNSGTLKRYIDELSVTGLTSN
                     PTIFDNAIRNSTTYDADISGKASSAKSGEDLFFELALADLTRAAELFQPAYARTDGVD
                     GWVSLEVSPLLAHDTNSTLAAARDLHRRGGKPNLFIKIPGTPEGLPAIEAAIFAGVPI
                     NVTLLFSREQYIAAADAYLRGVERRIEAGLNPAVASVASLFVSRWDVAVSGKVPAELA
                     NRLGIAIGQRAYKAYRELLDSPRFQRVANAGARAQRLLWASTGTKDPKASDILYVKAL
                     AAPFTVDTMPEGTLKAFADHGEAGDMLAPDGGDCEAVLAGFAKAGIDVDALANRLQNE
                     GAASFVKSWNDLMACIDSKRVAMRKAS"
     gene            complement(2140..2850)
                     /locus_tag="VF991_16385"
     CDS             complement(2140..2850)
                     /locus_tag="VF991_16385"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX9558074.1"
                     /translation="MTLSDPTVFLVDVDNTLVDNDGIQQDLKDHIEQTYGLAARERYW
                     RILEDLFTEVGYRDYIGALQRYRSEHPYEVELLSMSGFLMDYPFVDRLYPDALEVLKR
                     LRSLGPTVILSDGDVVFQPRKVERAGLSEAVDGQVLIYIHKEEALADIERRHPASHYV
                     LVDDKLRILDAVKQVWKDRVTTVFPRQGQYAHDAKVISALPPADVTIERIGDLLDHDL
                     SRLRTAPRDIATNLKVTP"
     gene            complement(3137..3766)
                     /locus_tag="VF991_16390"
     CDS             complement(3137..3766)
                     /locus_tag="VF991_16390"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEX9558075.1"
                     /translation="MQYAVSDVNHHDRYKILTAFVLPRPIAWVTTLGPTGTVNAAPFS
                     FFNVFAEDPPLCMFAVNKRPDGRIKDTWTNIQRTGQFVINLTDEPLARAMHESSGDFP
                     PDIGEPGYLGLKLAPSVDVAPPRLADAPWAMECRTWQVINVKDDRQLVIGEGLRFHIR
                     DELWDAKAMRVHMEKYHPIGRMFADRYCRTDDRVVFPAAAGPKKEAAAD"
     gene            complement(3776..4726)
                     /locus_tag="VF991_16395"
     CDS             complement(3776..4726)
                     /locus_tag="VF991_16395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007760602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoyl-D-amino-acid hydrolase"
                     /protein_id="HEX9558076.1"
                     /translation="MSRRLKVSAAQLGAIHRADSRKSVVKRLVEMLKEADSRGSKFVV
                     FPELALTTFFPRWWMEDQEEVDKYFEAQMPSPETLPLFELARSKGIGFYLGYAELTEE
                     EGKTRHFNTSILVGPDGRIVGKYRKIHLPGHSDHLPKAPFQHLEKRYFEVGNLGFNVW
                     KMFKEDVLVGQCICNDRRWPETFRVMALKGAEMVVLGYNTPTENIYHPTEPPYIRVFH
                     HLLSCQANAYQNGIWVVATAKAGKEDGFGMYGCSVIVAPTGEIVGKAVTEEDEVISYD
                     CDLALGDYIRNTVFNFARHRRIEHYKLITERTGVKVEPSN"
     gene            4961..6679
                     /locus_tag="VF991_16400"
     CDS             4961..6679
                     /locus_tag="VF991_16400"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF013113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX9558077.1"
                     /translation="MTQDSSAYWKKSRVELRAAGFDPDRTAQTNAVVTIASAYTNAHR
                     CNNRVRSITDLLVDLIAERGGQGLIVGAPAVSDALTQGTPTAGYSLVSRDVVADCFEI
                     GHYAHHGDAMIVISGCDKTGAAALMPLARTNAFGLVLYPGTSSPGKVTFGPWAKKGTN
                     LTIMDWAEGRAANEAGRLSDAEFLELERNVMPGSGTCGAMFTANTMSTLAEAIGMMLP
                     RGASHPADYDAKSDIHDDVRAQARASVEALYRLIAAGIRPLDIMTERAFENAIATVYA
                     MGGSTNMYLHLLAIARQAQVPITIERIQEVGERIPLLANLQPHGPYAMTSLHAIGGVP
                     IVMKELLRVGLLHGDVLTVTGKTLAENLEAVPTLEQIGAQDIVFPVAKPIAPANHHIS
                     VLKGNLAPESCLLKLSGKTLEKGQFRGTARVFESEADAMTAIRAGQIVAGNVVVVRNV
                     GPVGGPGMPEMVMLTIQLQGRGLGEDVALITDGRFSGVSHGILIGHISPEAARGGPIA
                     AVRDGDAIVIDPRARTLNLDVSDEEIAKRMSDWRAPDLATRARPGSVHHKYVRLVSSA
                     HYGCVV"
     gene            complement(6702..8171)
                     /gene="hydA"
                     /locus_tag="VF991_16405"
     CDS             complement(6702..8171)
                     /gene="hydA"
                     /locus_tag="VF991_16405"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004157 - dihydropyrimidinase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HEX9558078.1"
                     /translation="MADYDLIVRNAKIVTAERQSEGDIAVKDGKVAALGADVKGTAAR
                     EIDAAGKFVLPGGVDSHCHIEQKSGMGVMCADDFYTGTVSAAFGGTTTVIPFAAQHRG
                     MSLRQVVKDYHEAATPKAVIDYAFHLIISDPSEQVLGQELPALIKDGYTSFKIYMTYE
                     ALRVSDYQMLDILALARREGALVMVHAENHDMIQWLAHHLVDQGHVAPKFHAIAHARV
                     AEAEATNRAISLARLVDAPLLLVHMSEVEAIETLRQAQKKGLKIFGETCPQYIALTAQ
                     DMDKPGVEGAMWCCSPPPRDAEAQEAVWAALKDGTFQTFSSDHAPYQFNEKGKIPKGD
                     KTTFKEMANGVPGLEIRLPMLFSEGVQKGRITLQQFVALTSANHAKLYGLYPRKGTIA
                     VGSDADFAIWDADKDVTIRWKDLHDNVGYSPYEGRQIKGWPITVVSRGRVVVENGKLN
                     AQRGSGQFLPCASPDSAKPQGQTAPELQAMSRFGAKPLF"
     gene            complement(8177..9133)
                     /locus_tag="VF991_16410"
     CDS             complement(8177..9133)
                     /locus_tag="VF991_16410"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007757213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX9558079.1"
                     /translation="MTAKLTEDAKGVFIIAATPFTDEGALDLQSVDTLTDFYLQCGVH
                     GFTLLGMMGEAHKLTAEESLSVVNRVIDRAQGRQVIVGVSHAGLENVRRLSHEVMVAG
                     ASGVMVAPPPGLKGDDGVYNYYAQVFKALGPDIPVVHQDYPQSTGVYLAPSVFERLVD
                     DFKQLVMLKHEDAPGLAKLSRVREGEKKPGRRRVSILVGNGGLYLPQEMRRGADGAMT
                     GFAYPEMLVQVYELFAAGETEEAEDLFDIYLPLVRHEQQPAIGLALRKEVLFRRGAIK
                     SPRQRAPGSSLTATDRAELDGLVQRLERRLAASGRATKVAAE"
     gene            9174..10643
                     /locus_tag="VF991_16415"
     CDS             9174..10643
                     /locus_tag="VF991_16415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9558080.1"
                     /translation="MSAKITHVRRLDHAVAWDESEQRHVYLADADLVFRGSEILHVGP
                     GYAGPADSVVDGAGFMAIPGFVNVHSHPFSEPANKGLTEEVGSDKLGQSSLYEYLPVF
                     GLDAEDAGPSTTVAMSELLKSGVTTITDLSISRPGWLDDLAATGIRAVVAPMMRQGYW
                     FTKNGHTVEYAWDEKAGEKAFETAMQTIDRAMQHPSGRLSAMVCPSQIDTCREGFFKE
                     ALQEARKRGIPIQTHACQAVVEFHEMVHRHGKTPIEWLDAIGVLGPDLVIGHGIFLSD
                     HPQIHYPHGRDFEILRDSGAAVAHCPTVFARRGMALNTIGRYMDAGITVGIGTDTFPH
                     NMVDEMRLACYVARVLTGNYKRGTTRHAFEAATVGGAKILRRPDLGRLAPGCKADFSL
                     VDMNHPYMQPAHEPVRSLIYSASERAIRHVYVDGTQVVKDGKALTVDVEAATAGLIEG
                     QRKRLATVSQRDWAGRTADQLAPPVYGTKDRLPQSRPVT"
BASE COUNT         1874 a         3406 c         3495 g         1908 t
ORIGIN      
        1 gcttgagata ctgctcataa ggcagcacgg ccaccgtctg ggcgccgaag aaatcgttgt
       61 accagaggga gagcagcccc atcagcaccg gcaggttgcg ctcgaagggc gcggtgcgga
      121 agtgctcgtc catctgatgg aagccatcca gcatggcgcg gaaattatct gggccgatgg
      181 caagcatcgt cgacagccca atagccgaat ccatcgagta gcgcccgccg acccaatccc
      241 aaaagccgaa catgttggcc gtgtcgatgc cgaacttcgc cacctcctgg ccattggtgg
      301 aaacggcaac gaaatgtttg gccgtcgccg cagactcgcc gttcagcccg gccagcagcc
      361 aatcacgcgc ggtatgcgcg ttggtcatgg tctcgagcgt ggtgaaggtc ttggaggaga
      421 taatgaacaa tgtctctgcg ggatcgagat cctgcaccgc ctcggcgaag tccgagccgt
      481 cgacattgga gacgaagcgg aaggtcatgg cgcgctcgct gtagtgcttg agcgcttcgt
      541 aggccatgac agggccgaga tcggagccgc caatgccgac attgatcaca ttgcgaatgg
      601 gcttgccggt atggcccttc caggcacccg tgcgcacgcg gttggaaaaa tccgccatct
      661 tgtccagaac ggcatgcaca tcgggcacca cattccggcc gtcgtgcagg atggaagcgc
      721 cgcgcggcgc gcgcagggcg acgtgcagca ccgcgcgctt ttccgagacg ttgatcttgt
      781 cgccgcggaa catggcatcg atgcgatcgc gcagcccaca ctcctgggca agctggagca
      841 gcagccgcag ggtttggtcg gtgatccgat tcttggaata gtcgagatag atcccggccg
      901 cctcgaccgc cagccgctcg ccgcgcttgc catcctcggc gaagagctgc ctcaggtgca
      961 cccccttcat ctcctggtag tgcttctcca gcgccaccca cgccgagcgc ttgcgtaaag
     1021 ccggtgcggt cattgactat tccctcggag gcggtggtca gctcgccttg cgcattgcaa
     1081 cgcgcttgga atcaatgcag gccatcagat cgttccacga cttgacgaag gacgcggcgc
     1141 cctcgttctg aagccggttg gcgagggcgt cgacgtcgat gcccgccttg gcgaagccgg
     1201 cgagaaccgc ctcgcagtcg ccgccgtccg gcgcgagcat gtcgcccgcc tcgccatggt
     1261 cggcgaaggc cttgagcgta ccctccggca tggtgtcgac cgtgaagggt gcggcgagcg
     1321 ccttcacata aaggatgtcg gaggctttgg ggtctttggt gccggtgctg gcccacagca
     1381 ggcgctgcgc ccgggcgccg gcattggcga cacgctggaa gcgcggcgag tcgagcaact
     1441 cccgataggc cttgtaggcg cgctggccga tggcgatgcc gagccggttg gcaagctcgg
     1501 ccgggacctt gccgctcacc gcgacgtccc agcggctgac gaacagcgag gcgaccgagg
     1561 cgacggccgg atttagcccc gcctcgatcc gccgctcgac gccgcgcagg taggcgtcgg
     1621 ccgccgcgat atattgctcg cgggaaaaca gcagtgtgac attgatcgga acgccggcga
     1681 agatcgccgc ctcgatggca ggcagccctt cgggagtgcc aggaatcttg atgaagaggt
     1741 tgggcttgcc gccgcgccgg tggagatcgc gagcggccgc caaggtgctg ttggtgtcat
     1801 gggccagcag gggcgagacc tccagtgaca cccagccgtc gacaccgtcg gtccgggcgt
     1861 aggccggctg gaacagctcg gcggcccggg tcagatccgc cagtgccagt tcgaagaaca
     1921 ggtcctcccc cgatttggcc gaggacgcct tgccggaaat gtcggcgtca taggtcgtgc
     1981 tgttcctgat cgcattgtcg aagatcgtgg ggttcgaggt gagccccgtc accgagagct
     2041 cgtcgatgta gcgtttcagc gtaccgctgt tcagcaggtc gcgggtgatg ttgtcgagcc
     2101 acaggctctg gccgagatcg tgaagcgtcc tggttgcttt catggcgtca ccttcaagtt
     2161 ggttgcaatg tcgcgcggcg ctgtccgcag ccgcgacaag tcatggtcga gcaggtcgcc
     2221 gatacgctcg atcgtaacat ccgccggcgg caaagcgctg atcactttcg cgtcgtgagc
     2281 atactggccc tggcgcggga acaccgtcgt cacgcggtct ttccagacct gcttgaccgc
     2341 gtccaggatg cgcagcttgt cgtcgaccaa gacgtaatgg ctggccggat ggcgccgctc
     2401 gatatcggcc agcgcctctt ccttatggat gtagatcagc acctgcccat cgacggcctc
     2461 ggacaggccg gcacgctcga ccttgcgcgg ctggaagacg acgtcgccgt ccgacaggat
     2521 cacggtcggg ccaaggctgc gcagccgctt cagcacctcg agcgcgtccg ggtacagccg
     2581 gtcgacgaaa ggataatcca tgagaaagcc cgacatcgac agcagctcca cctcgtaggg
     2641 gtgttcgctg cggtagcgct ggagggctcc gatgtagtcg cgatagccga cctccgtgaa
     2701 aagatcctcc aggatccgcc aatagcgctc gcgggcggcg agaccgtagg tctgctcgat
     2761 atggtccttc agatcctgtt ggatgccgtc gttgtcgacc agcgtgttgt ccacgtcgac
     2821 gaggaagacg gtcggatcag acagggtcat gcagcactcc cagcgtgtcc attgtgccag
     2881 cggcccggcg agtcgcaggc ctgcgcccaa gggcctcgtc atttccactt tatgccccct
     2941 tagaagcggc atctgccggg aaatgtcttt tccaatatta ctctacatta gcggttccaa
     3001 cgatagtccg agccatacgc ctgaagggtc aatgccgcaa tgatcctgca gagtcatcgc
     3061 gtcagcaaga gcgccgtcat gcgcgcatgg tatgcaggtt gttccattac cgaaggtgcg
     3121 gccggatcat ccggcatcag tcggcggcgg cttccttctt aggccctgcc gccgcgggga
     3181 agacgacccg gtcgtcggtg cggcagtagc ggtcggcgaa catgcggccg atcggatggt
     3241 acttctccat gtgcacgcgc atcgccttgg catcccacag ctcgtcgcgg atgtggaagc
     3301 gcaggccctc gccgatcacg agctggcggt cgtccttgac gttgatcacc tgccaggtcc
     3361 tgcactccat cgcccacggc gcgtcggcca gacgcggcgg cgcgacgtcg accgagggtg
     3421 cgagcttgag gccgagatag cctggttcgc cgatatcggg cgggaagtcg ccgctcgatt
     3481 cgtgcatggc gcgggccagc ggctcgtcgg tgagattgat cacgaactgg ccggtgcgct
     3541 ggatgttggt ccaggtgtcc ttgatgcggc cgtccggccg cttgttgacg gcgaacatgc
     3601 agagcggcgg gtcctcggcg aagacgttga agaagctgaa gggcgctgcg ttgaccgtgc
     3661 cggtcgggcc gagcgtcgtc acccaggcga ttggccgcgg cagaacgaag gccgtcagga
     3721 tcttgtagcg atcgtgatgg ttcacgtcgg agacggcgta ttgcatttca ggccctcagt
     3781 tactcggctc gaccttcacg ccggtccgtt cggtgatcag cttgtaatgc tcgatgcggc
     3841 gatgcctggc gaagttgaac acggtgttgc ggatatagtc gcccagcgcc aggtcgcaat
     3901 cataggagat cacctcgtcc tcctcggtga cggccttgcc gacgatctcg ccggtcggcg
     3961 ccacgatcac cgagcagccg tacatgccga agccgtcctc cttgccggcc ttggccgtcg
     4021 ccaccaccca gatgccgttc tgataggcgt tggcctggca cgacagcagg tggtggaaca
     4081 cgcggatata gggcggctcg gtcggatgat agatgttctc ggtcggcgtg ttgtagccca
     4141 gcaccaccat ctcggcgccc ttcagcgcca tgacgcggaa ggtctcgggc cagcgccggt
     4201 cgttgcagat gcattggccg accagcacgt cctccttgaa catcttccag acattgaagc
     4261 ccaaattgcc gacttcgaaa tagcgtttct ccagatgctg gaacggcgcc ttgggcaggt
     4321 ggtcgctgtg gccgggcaga tggatcttgc ggtatttgcc gacgatgcgg ccgtcggggc
     4381 cgaccaggat ggaggtgttg aaatggcggg tcttgccctc ctcctccgtg agctcggcat
     4441 agcccaggta gaagccgatc cccttggagc gcgccagctc gaacagcggc agggtctcgg
     4501 ggctcggcat ctgcgcctcg aaatacttgt cgacctcctc ctggtcttcc atccaccagc
     4561 gcgggaagaa ggtggtgagc gccagctcgg gaaacaccac gaacttcgag ccgcgcgaat
     4621 cggcctcctt cagcatctcg accagccgct tgaccacgct cttgcggctg tcggcgcgat
     4681 ggatggcgcc gagctgggcg gcggatactt ttagacgacg ggacacgacg gtaactcctc
     4741 tatccggtta tcctgagtgc agcgaaggcc tgccccgagc gtagccgaaa ggatctcatt
     4801 gccgcacgcg ccgagacgat tttctcatgg atacaccata gcaaacttta cgccgtccgg
     4861 atcaaagagg agggtagtgc gaaagtttta acgacctgac tgggcatcat cgcttcttgc
     4921 tctcgtagca ttcaaaccaa cgactgggta accttgcttc atgacacaag acagcagcgc
     4981 ctattggaag aaatccagag tggagctccg ggcggcaggg ttcgacccgg accggacggc
     5041 gcagaccaat gccgtggtta ccatcgccag cgcctacacg aacgcgcatc gatgcaacaa
     5101 tcgggtccgc agcatcaccg acctgctggt cgacctcatt gccgaacgcg gcgggcaagg
     5161 tctgatcgtc ggtgcgcccg cggtatccga cgcgctgacg caagggactc ccacggcagg
     5221 ctacagcctc gtgtcccgtg acgtcgtcgc ggattgcttc gagatcggtc attacgctca
     5281 tcacggcgac gcgatgatcg tgatctccgg ctgcgacaag accggcgccg ccgcgctgat
     5341 gccgctggca cgcaccaatg cgttcggctt ggtgctgtac ccgggaacca gctcgcccgg
     5401 caaagtgacg ttcggaccat gggcgaaaaa aggcacgaac ctcacgatca tggactgggc
     5461 cgagggccgt gcggccaacg aggcgggccg gctctcggat gccgaattcc tggagctcga
     5521 gcgcaacgtg atgcccggca gcggcacctg cggcgcgatg ttcacggcca atacgatgag
     5581 cacccttgcc gaggcgatcg gcatgatgct gccgcgcggc gcctcgcatc cggcggacta
     5641 cgatgcgaag agcgacattc acgacgatgt ccgggcgcag gcgcgggcat cggtcgaggc
     5701 gttgtatcgg ctgatcgccg ccggcattcg accgctcgac atcatgaccg agcgcgcctt
     5761 cgagaacgcg atcgcaacgg tctatgcaat gggcggctcg accaacatgt acctgcatct
     5821 gctggccatt gcgcggcaag cccaggtgcc gatcacgatc gaacgcatcc aagaggtcgg
     5881 tgagcgcata ccgctgctcg ccaacctcca gccccatggc ccgtatgcca tgaccagcct
     5941 gcatgcgatc ggcggcgtgc cgatcgtcat gaaggagctg ctgcgggtgg gcctgctgca
     6001 tggcgacgtg ctgacggtca ccggcaagac cctggcggaa aacctagaag cggtgccgac
     6061 gctggagcag atcggcgcgc aggacatcgt gtttccggta gccaagccga tcgcgccggc
     6121 caaccaccac atcagcgtgc tgaagggcaa tctcgcgccg gaaagttgtc tcttgaagct
     6181 cagcggcaag acgctggaga aagggcaatt ccgcggtacg gcgcgggtat tcgaatccga
     6241 ggccgatgcg atgacggcca tccgggccgg ccagatcgtg gccggcaacg ttgtcgtggt
     6301 gcgcaatgtc ggtccggtcg gcgggccggg catgcccgaa atggtgatgc tcaccatcca
     6361 gctccaaggg cgcggcctcg gggaagatgt cgcgctgatc actgacggcc gcttttccgg
     6421 cgtgtcccat ggaatcctga tcgggcatat ctcgccggag gcggctcgcg gcggtccgat
     6481 tgcggcggtc cgcgatggcg atgccatcgt gatcgatccc cgcgcgcgga cgttgaacct
     6541 ggacgtttcc gatgaagaga tcgccaaacg catgtctgac tggcgggcac ccgatttggc
     6601 tacacgggct cgtccgggat cagtccatca caagtacgtt cgactggtgt cgtccgctca
     6661 ctacggctgc gtggtgtgac gctgcggcga caattgtgtg cttagaataa cggcttcgcg
     6721 ccgaagcgcg acatcgcctg cagctctggc gcggtctggc cttgcggctt ggctgaatcg
     6781 ggcgaggcgc agggcaggaa ctggcccgaa ccgcgttgcg cattgagctt gccgttctcg
     6841 accacgaccc ggccgcgact cacgaccgtg atcggccagc ctttgatctg gcggccctcg
     6901 taggggctgt agccgacgtt gtcgtgcagg tccttccagc gaatggtcac gtccttgtcg
     6961 gcgtcccaga tcgcgaagtc ggcgtcggag ccgacggcga tggtgccctt gcgcggatag
     7021 aggccgtaga gcttggcgtg gttggccgag gtcagcgcca cgaactgctg cagggtgatg
     7081 cggcccttct gcacgccttc ggagaacagc atcggcaggc ggatctccag gcccggcacg
     7141 ccgttggcca tctccttgaa ggtcgtcttg tcgcccttgg gaatcttgcc cttctcgttg
     7201 aactggtagg gcgcgtgatc ggacgaaaag gtctggaacg ttccatcctt cagcgcggcc
     7261 cacaccgcct cctgcgcctc ggcatcgcgc ggcggcgggc tgcaacacca catcgcgccc
     7321 tcgacgccgg gcttgtccat gtcctgggcg gtgagcgcga tatattgcgg gcaggtctcg
     7381 ccgaagattt ttagcccctt cttctgcgcc tggcgcaggg tttcgatcgc ttcgacctcg
     7441 gacatatgga cgaggagcag cggcgcatcg accaggcgcg ccagcgagat cgcgcgattg
     7501 gtcgcctcgg cctcggccac gcgtgcatgg gcgatggcgt ggaacttggg cgcgacgtgc
     7561 ccctggtcca ccagatgatg cgccagccac tggatcatgt cgtggttctc ggcatgcacc
     7621 atcaccagcg cgccttcgcg gcgggccagc gccaggatgt cgagcatctg gtagtcgctg
     7681 accctgagcg cctcgtaggt catgtagatc ttgaacgagg tgtaaccgtc cttgatcagc
     7741 gccggcagct cctggcccag cacctgctcc gacgggtcgg agatgatcag atggaaggcg
     7801 tagtcgatca ccgccttggg tgttgccgct tcgtgatagt ccttcaccac ttggcgcagc
     7861 gacatgccgc gatgctgggc ggcgaagggg atgaccgtgg tcgtgccgcc gaacgccgcc
     7921 gaaacagtgc cggtataaaa atcgtcggcg cacatcacgc ccatgccgga cttctgctcg
     7981 atatggcagt gactgtcgac gccgcccggc agcacgaact tgcccgcggc atcgatctcg
     8041 cgcgcggcgg tgcccttcac gtcggcgccc aaggcggcga ccttgccgtc cttgacggcg
     8101 atatcgcctt cgctctggcg ctcggcggtg acaatcttgg cgttgcggac gatcaggtcg
     8161 tagtcggcca tcacccctac tccgccgcga ccttggtcgc tcgaccggac gctgcgaggc
     8221 gccgctccag ccgctggacc agcccgtcga gctcggcgcg gtcggtcgcg gtgagcgacg
     8281 atcccggcgc gcgctgccgg ggacttttga tggcgccgcg gcggaacagc acctccttgc
     8341 gcaacgccag cccgatcgcg ggctgctgct cgtggcggac gaggggcagg tagatgtcga
     8401 acaggtcctc ggcctcctcg gtctcgccgg cggcgaacag ctcgtagacc tgcaccagca
     8461 tctccgggta ggcaaagccc gtcatggcgc cgtcggcgcc gcgccgcatt tcctgcggca
     8521 ggtaaagccc gccattgccg accaggatag agacgcgccg acgacccggc ttcttttcgc
     8581 cttcgcgcac gcgtgagagc ttggcgagac ccggtgcgtc ctcatgcttc agcatgacga
     8641 gctgcttgaa gtcgtcgacc agtcgctcga acaccgacgg ggcgagatag actcccgtgc
     8701 tctgcggata gtcctggtgg acgacgggaa tgtctggccc aagcgccttg aagacctgcg
     8761 catagtagtt gtagacgccg tcgtcgccct tgagtccggg cggtggcgcc accatgacgc
     8821 ctgatgcgcc cgcgaccatg acctcgtgcg acaggcgacg gacgttttcc agcccggcgt
     8881 ggctcacgcc gacgatcacc tgccggccct gggcgcggtc gatcacacgg ttgactacag
     8941 acaatgactc ttccgcggtg agcttgtgcg cctcgcccat catgccgagc agcgtgaacc
     9001 cgtggacgcc gcattgcaga tagaaatcgg tcagagtgtc gacgctctgc aggtcgagcg
     9061 cgccctcgtc ggtgaagggc gtggcggcga tgatgaagac gcctttggca tcttcggtga
     9121 gttttgcggt catggcctga tcatgccagt ctcgccagcg aagggaagaa aagatgagcg
     9181 ccaagatcac gcatgttcgc cgcctcgacc atgcggtcgc ctgggacgag tccgagcaac
     9241 ggcatgtcta ccttgccgac gccgacctgg tgttccgggg cagcgaaatc ctgcatgtcg
     9301 ggccaggcta cgccgggccg gcggacagtg tcgtcgatgg cgcgggcttc atggcgatcc
     9361 cgggcttcgt caacgtgcac agccatcctt tttccgaacc ggccaacaag ggcctgaccg
     9421 aagaggtcgg cagcgacaag ctcggccaaa gttcgctcta cgaatatctg ccggtgttcg
     9481 ggctcgatgc cgaggacgcc ggtccctcga ccactgtggc gatgtcggag ctcttgaaga
     9541 gcggcgtcac caccatcacc gacctttcga tcagccgccc gggctggctg gacgacctcg
     9601 cggcgacggg catccgcgcc gtcgtggcgc cgatgatgcg ccagggctac tggttcacca
     9661 agaacggcca caccgtcgaa tacgcctggg acgagaaggc cggcgagaag gctttcgaga
     9721 cggcgatgca gaccatcgac cgcgccatgc agcatccgag cggtcggctg tcggcgatgg
     9781 tctgcccctc gcagatcgac acctgccgcg agggcttctt caaggaagcg ttgcaggagg
     9841 cgaggaagcg cggcatcccg attcagaccc atgcctgcca agcggtcgtc gagttccacg
     9901 agatggtcca tcgccacggc aagacgccga tcgaatggct cgatgcgatc ggcgtgctcg
     9961 ggcccgacct ggtgatcggc cacggcatct tcctgagcga ccatccgcag atccactatc
    10021 cgcatgggcg cgacttcgag atcctgcgag actccggcgc ggcggtggcg cactgcccga
    10081 cggtgttcgc ccgccgcggc atggcgctca acaccatcgg ccgctacatg gatgccggca
    10141 ttaccgtcgg catcggcacc gacaccttcc cgcacaacat ggtcgatgaa atgcggctgg
    10201 cctgctacgt cgcgcgcgtg ctcaccggca actacaagcg cggcacgacg cggcatgcct
    10261 tcgaggcggc gaccgtgggc ggcgccaaga tcctgcgccg gcctgatctc ggccgcctgg
    10321 caccgggctg caaggccgac ttctcgctgg tcgacatgaa ccatccctac atgcagccgg
    10381 cgcacgagcc ggtgcgcagc ctgatctatt cggccagcga gcgcgccatc cgccacgtct
    10441 atgtcgacgg cacgcaggtg gtgaaggacg gcaaggcgct cacggtcgat gtcgaggccg
    10501 cgacggccgg cctgatcgaa ggccagcgca agcgcctcgc gaccgtgagc cagcgcgact
    10561 gggccggccg caccgccgac cagttggcgc cgccggtcta cggcacgaag gatcgactgc
    10621 cgcagtcgag gccggtgact taatgagggt caagccggac cgcgggcctc caggcccgca
    10681 tca
//
LOCUS       DASWGA010000702         1906 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1471437, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000702 DASWGA010000000
VERSION     DASWGA010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1471437"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..1073)
                     /locus_tag="VF991_16420"
     CDS             complement(231..1073)
                     /locus_tag="VF991_16420"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF037026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9558081.1"
                     /translation="MTFEIAVGSADDVQRMARWAGDEGWNPGNTDAHAFFVADPGAFL
                     IGRLDGEPVVCISVVKYGAAFGFLGFYIARPAVRGKGYGIKVWQAGMARLGGRNVGLD
                     GVVAQQANYRKSGFRLAWNNVRHEGAPGAAQPPAGVSLVDARSVAFDKLAAYDRRFFA
                     EARDSFLASWISLPERAAMVALRDGALAGFAVIRACQAASRVGPLFADSPEIAAALVS
                     ALAAKLGATTVAIDMPDINKSALALAERMRLKPAFETARMYTGPNPSIDLGGVFGVTS
                     LELG"
     gene            1178..>1906
                     /locus_tag="VF991_16425"
     CDS             1178..>1906
                     /locus_tag="VF991_16425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase"
                     /protein_id="HEX9558082.1"
                     /translation="MTRLALLVAMFFVSLLLAGQAGAQQWAASWTASAHGPYPIGNPT
                     AQPELKFAFPSAQQGARNQTFRLIVKPDVWGQQTRIRLSNAFGTQPVTFNDAFVGLQE
                     SGSAVVKGTNQPVLFAGLKGVTVAPGQSVVSDAVALPFVKSPPDPLLKGRKLAVSFHV
                     TGESGPMTWHAKALQTSYVTPPGSGPKGQDEGESAIPFSTTSWYFLDEIDMNLATKAA
                     VIVAFGDSITDGTGTTINGDDRWPD"
BASE COUNT          350 a          644 c          619 g          293 t
ORIGIN      
        1 aaggcgtagt ggccgctgag cgtcgtcatg tagcggccca tgatctgctg ctggctgtag
       61 cgcaggtcgg ggcccatcac cgtgttgaag gtgatcgtgg cgccattgac cgcgctgcgc
      121 cgtgccagct tccgacaaag ggattctgct gggccggcgc gatcgcggaa ccgagaagga
      181 caagaacggc caacaacgca acgcgacgct gcatgccgac ctcccccggt tcaccccagc
      241 tcgagactgg tgacgccgaa cacaccgccg agatcgatgg acgggttcgg cccagtatac
      301 atgcgggccg tttcgaatgc aggcttcagc ctcatccgtt cggccagcgc cagggcggac
      361 ttgttgatgt ccggcatgtc gatcgccacc gtcgtagcgc cgagcttggc ggcaagcgcc
      421 gataccaagg cggcggcaat ctcgggcgaa tcggcaaaca atggccctac gcgcgacgcc
      481 gcctggcagg cgcggatgac ggcaaaaccc gccagcgcgc cgtcgcgcag cgccaccatg
      541 gccgcgcgtt cgggcagcga gatccacgac gccaggaagg aatcgcgcgc ttcggcgaaa
      601 aagcggcggt cgtaggcggc gagcttgtcg aacgccacgc tacgcgcgtc gaccaggctg
      661 acgccggcgg gcggctgggc agcgccgggc gcgccctcgt ggcggacgtt gttccaggcc
      721 agccggaagc ccgacttgcg atagttggcc tgctgggcca ccaccccgtc gaggccaacg
      781 ttacggccgc cgagccgcgc cataccggcc tgccagactt ttatgccata ccctttgccg
      841 cgcaccgcgg ggcgggcgat gtaaaaaccc aaaaagccga acgctgcgcc gtatttcacc
      901 accgagatgc agacgactgg ttcgccgtcg agccgaccga tcaggaaggc gccgggatcg
      961 gcgacgaaga aggcatgcgc gtcggtgttg ccagggttcc agccctcgtc gccggcccag
     1021 cgggccatgc gttgcacatc gtcggcactg ccgaccgcaa tctcgaatgt catgcgggaa
     1081 agctagccga attggcggaa tgcagcgaca gttgcttgca aaggccgcgt catcgccgtc
     1141 agagtgatag ccaacgaaag gttgggcgga ggatacgatg acgcggttgg cgctgctggt
     1201 agcgatgttc ttcgtttcac tgctgctggc gggccaagcc ggcgcgcagc aatgggcggc
     1261 aagctggacc gcttcggcgc acggtcccta tcccatcggc aatccaaccg cccagcccga
     1321 gctcaagttc gccttcccgt ccgcccagca gggcgcccgc aaccagacct ttcgcctgat
     1381 cgtgaagccc gacgtgtggg gccagcagac ccgcatcagg ctgtcgaatg ccttcggcac
     1441 ccaacccgtc actttcaacg acgccttcgt cggcttgcag gagagcggca gcgctgtcgt
     1501 caagggcacc aaccagccgg tgcttttcgc cggcctgaag ggcgtcaccg ttgcgcccgg
     1561 ccagagcgtc gtaagcgatg cggtggccct gccgttcgtc aaatccccgc ccgatccgtt
     1621 gctcaagggg cgcaagctcg cggtcagctt ccatgtcacg ggcgagagcg gcccgatgac
     1681 ctggcacgcc aaggcgctgc agacctccta cgtcacgccg cccggttccg gtcccaaggg
     1741 ccaggacgaa ggcgagagcg cgatcccgtt ctcgacgacc tcgtggtact tcctcgacga
     1801 gatcgacatg aacttagcaa ccaaggcggc tgtcatcgtg gcgttcggcg actcgatcac
     1861 cgacggcacg ggcaccacca tcaacggcga cgaccgctgg cccgat
//
LOCUS       DASWGA010000703         3571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1223567, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000703 DASWGA010000000
VERSION     DASWGA010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3571
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1223567"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            349..864
                     /locus_tag="VF991_16430"
     CDS             349..864
                     /locus_tag="VF991_16430"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX9558083.1"
                     /translation="MLGGSLPIIASGPYDREINVRWQCRIMVKIPKTLQTHINTAFPN
                     DVCLIATALPSGYAQVTPRGSTQVFDDGHFSLWERGKGSTTENLVDGKKVTIYFRKPQ
                     LRAAGILPKGGIARFYGTARLYRSGPIYEEVWTRLIQPEKDRDPDKKGFAVLIEVVRA
                     EELDGTPLSLD"
     gene            complement(894..1622)
                     /locus_tag="VF991_16435"
     CDS             complement(894..1622)
                     /locus_tag="VF991_16435"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011970233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9558084.1"
                     /translation="MHYATICKGCWQQMHMPIPLRGALSVPFRAFGIRPSRMNPNICT
                     ICETMFERRMKARTVTLDATILFADLRAYTKLSQSMSTTEMGGLLDAFYDQCAVAIWR
                     HDGLLNKTIGDAVMAVFNFPIRQGDHTRQAVLAAREMQRSFGAEHPELAASLAGTGIQ
                     VGIGVGIHTGEISFGEFGHAHRDLTAIGTVVNTASRAQSAAKAGQILVTRAVYDRARS
                     VLPASTAGEYQLKGFDEPIELYTA"
     gene            complement(1719..2012)
                     /locus_tag="VF991_16440"
     CDS             complement(1719..2012)
                     /locus_tag="VF991_16440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558085.1"
                     /translation="MIDRESDGRFVATIPDLDDVAAWGPTDKEAVAHAAQLAIEHVRA
                     RQESGQPVPRPRPASAMPSSTRPREIGRAMISVDVGRAAATASVAAKTEAAQL"
     gene            2223..>3571
                     /locus_tag="VF991_16445"
     CDS             2223..>3571
                     /locus_tag="VF991_16445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007763200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9558086.1"
                     /translation="MSRWRVGVDSGGTFTDICLFDEQTGRVETWKVPSTPDDPSRGIA
                     QGVEEGMRRVAPEATERPAAPIVYFGHGTTVATNALIQHRGAKAGLITTDGFRDLLEI
                     GRQKRPDLYDLQADKPKTLVPRDLRLEVPERVRHTGEVDTPLDEDKMRAAAKALKAAG
                     VKAIAVSFLYGFIRPEHEKRAVAILREEVPDAFISAGHEIAPEFREYERLSTVVLNAY
                     LGPVMESYIRRLSPRLKALGMTATPHLTQSNGGVIGFATAADMPVRTVLSGPSTGVVG
                     AQAIGALAGFADLITFDMGGTSTDVALLQDGHCKLAAEATVHGYPIKAPMLDIHSVGA
                     GGGSIATIDSGGLLKVGPRSSGADPGPACYDKGSEEPAVTDANVVLQTLNPQHLLGGR
                     MKIRQDLAKRAIGRLAERLGLGIPETAQGILSVVTANMARAIRVISVQRGHDPRDYTL
                     "
BASE COUNT          636 a         1192 c         1158 g          585 t
ORIGIN      
        1 ttcagctcct cgacggcgag ctgatggccg accatcgccg gcacgccgta gaccgcgccg
       61 ccaccggtca gcgggtacat ggcgccgatg cggatcggct cctgggcaaa ggccgtcccg
      121 acacccaggg cgccgacggc aacgagcatt gcgctgtatt tcatgttctg tttcctcccg
      181 atttgaccac aagcattggt acgcgggtct cgatgcgcgg catctgggcc ggcaacagtc
      241 gaaacaactc actcacgtgg tgttctgccc gtcgccacta gatcaatacg cacctggctt
      301 cacaagaaaa ttgatgggga tgtccctgcc gattgggcca tccggggtat gctgggcggc
      361 tctcttccca tcatcgcgtc agggccatac gatcgggaaa tcaacgtcag atggcagtgc
      421 cgtatcatgg taaaaatacc caagactctc cagacgcaca tcaacaccgc gtttcccaac
      481 gatgtctgcc tgatcgccac ggcactgccg agcggctatg cgcaggtcac gccacggggc
      541 agcacgcagg tattcgatga cgggcatttc tcgctctggg aacggggcaa gggctcgacg
      601 acggagaatc tcgtcgatgg caagaaggtc acgatctact tccgcaagcc gcagcttcgt
      661 gccgccggta tcctgccgaa gggcggcatc gcgcgcttct atggtacggc ccggctttac
      721 agatcgggac cgatctacga ggaagtctgg acacggctga tccagccgga aaaagatcga
      781 gatcccgaca agaaaggctt cgccgtgctg atcgaggtgg tacgcgctga agagctcgac
      841 ggaaccccgc tttctttgga ttgagagcag cgggacttgc aaaaaagccc cgttcaggcc
      901 gtgtaaagct caatcggctc gtcgaaacct ttcagttggt attcgccggc cgtgctggcc
      961 ggcaaaacgg accgggcccg gtcatagacg gcccgcgtga ccaggatctg gccggctttg
     1021 gcggcggatt gcgcgcgcga ggcggtgttg acgaccgtgc cgatggccgt caggtcgcgg
     1081 tgagcgtggc cgaattcgcc gaagctgatc tcgccggtgt ggatgccgac tccgatcccg
     1141 acctggatgc ccgtgccggc aagggatgca gcaagctcgg ggtgttcggc gccgaagctt
     1201 ctttgcatct cgcgagccgc aagcaccgcc tggcgtgtgt gatcgccctg ccggatgggg
     1261 aaattgaaga ccgccatgac ggcgtcgccg atcgtcttgt tgagaagtcc gtcgtgccgc
     1321 caaatggcta cggcgcactg gtcgtagaag gcatcgagca ggccgcccat ctcggtcgtc
     1381 gacatcgact gggaaagctt cgtgtaggcc ctcaggtcgg cgaacagtat cgtcgcatcg
     1441 agcgtgaccg tgcgcgcctt catccgccgc tcgaacatcg tctcgcagat cgtgcagatg
     1501 ttcgggttca tccggctcgg gcgaatgcca aaggcgcgaa acggcaccga caacgcaccg
     1561 cgcaacggga tcggcatatg catctgctgc cagcacccct tgcagatcgt ggcgtagtgc
     1621 aacgtcatgg agcggttgcc ttcccagatc gcccgagtac ggccggcagc catctggccc
     1681 cggaagcagc caaatggtcg ggcctcgcgc ctgcgtcttt acagttgggc agcctcggtc
     1741 ttggcggcca cgcttgcagt cgccgccgcc cgcccaacgt cgacggaaat catcgcgcga
     1801 ccgatttccc tgggtcgcgt cgagctcggc atcgcggacg cagggcgcgg ccggggaacc
     1861 ggctgaccgc tctcctgccg cgcccgcaca tgttcgatgg cgagctgtgc cgcgtgggcg
     1921 accgcctcct tgtccgtcgg accccaggcc gcgacgtcgt cgagatcggg aatggtggcg
     1981 acgaaacggc catcgctctc gcgatcgatc aatgcccaat accaaacctt gtacatcttg
     2041 ccctcccttg gccccggcga agggtagaga ggcggccgca ggcaaggcaa cgatcggcag
     2101 gctccaagct gtggtcgatc tgtgtccgct gtgggtgact tcctccgcag gggcgacctt
     2161 gaaacagccc gagccgggcc actaacatcc acgccggcct aaccggggag acaaggaacg
     2221 gcatgtcgcg atggcgcgtc ggcgttgatt cgggcggaac attcaccgac atctgcctgt
     2281 tcgacgagca gaccggacgt gtcgagacct ggaaggtgcc gtcgacgccc gacgatccgt
     2341 cgcgcggtat cgcccagggg gtggaggagg gcatgcgccg cgtcgcgccg gaggcgacgg
     2401 aacgaccggc ggcgccgatc gtctatttcg gccacggcac cacggtggcg accaacgcgc
     2461 tgatccagca ccgcggcgcc aaagcgggcc ttataaccac cgacggcttt cgcgaccttt
     2521 tggagatcgg ccgccagaag cggcccgacc tctacgatct gcaggccgac aagcccaaga
     2581 ccctggtgcc gcgcgacctg cgcctggaag tgcccgagcg cgtgcgccat accggcgagg
     2641 tcgacacgcc cctcgacgag gacaagatgc gcgccgccgc caaggcgctg aaggcggcgg
     2701 gcgtgaaggc gatcgccgtc tccttcctct acggctttat ccgtccggag catgagaagc
     2761 gcgcggtcgc catcctgcgc gaggaggtgc ccgacgcctt catctcggcc ggccacgaga
     2821 tcgcgcccga gttccgcgaa tacgagcggc tgtcgacggt ggtgctgaac gcctatctcg
     2881 ggccggtgat ggaaagctac atccgccggc tcagcccgcg gctgaaggcg ctgggcatga
     2941 cggcgacgcc gcatctcacc cagtccaacg gcggcgtcat cggctttgcg accgccgccg
     3001 acatgccggt gcgcaccgtg ctctcgggcc cctcgaccgg cgtggtcggc gcccaggcga
     3061 tcggcgcgct ggcgggcttc gccgacctca taaccttcga catgggcggc acctcgaccg
     3121 acgtcgccct gctgcaggac ggccattgca agctcgccgc cgaagccacc gtgcacggct
     3181 acccgatcaa ggcgcccatg ctcgacatcc acagcgtcgg cgcgggcggc ggctcgatcg
     3241 ccaccatcga ctccggcggt cttctgaaag tggggccgcg ctccagtggc gccgatcccg
     3301 gcccggcctg ctacgacaag ggcagcgagg agcccgccgt gaccgacgcc aacgtggtgc
     3361 tgcagacgct gaacccgcag cacctgctgg gcggccgcat gaagattcgc caggacctcg
     3421 ctaagcgggc gatcggccgt ctggccgagc ggctgggcct cggcatcccg gaaacggcgc
     3481 aaggcattct gtcggtcgtc accgccaaca tggcccgcgc gatccgcgtc atctcggtgc
     3541 agcgcggcca cgacccgcgc gactacacgc t
//
LOCUS       DASWGA010000704         6984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2358640, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000704 DASWGA010000000
VERSION     DASWGA010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6984
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2358640"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1523
                     /gene="glyS"
                     /locus_tag="VF991_16450"
     CDS             <1..1523
                     /gene="glyS"
                     /locus_tag="VF991_16450"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00211.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEX9558087.1"
                     /translation="APIKFADTTRGHRFLSKGEIKVSGFADYAAKLRTAHVILDPAER
                     KKIVLAGAEKLCAEAQVSLKADDGLLEEVAGLVEWPVPLLGTIDAQFLELPPEVLIVS
                     MRTHQRYFATTKPGGTLANRFVVVANTTAPDDGKTIVDGNERVLRARLSDAKFFWDQD
                     RKVGLEDRLPALRDIVFHAKLGTQAERVERIAGLAVEIAKFVPGADVGQVAQAARLCK
                     ADLVTGMVGEFPELQGVMGRYYALDEKLPAAVADAIGDHYAPAGPNDRCPSAPVSIAV
                     ALADKLEALISFWSIGEKPTGSRDPYALRRAALGTIRIVVENKLRLPLKHFFKADDLM
                     EFFAERLKVQVREKGVRHDVVDAVFALGGEDDLVRLLARVEAVQSFLGTDAGKNLLTA
                     YGRAVNIVRVEERKDKALAAKIAGAPDPTLFEQEEERALFARLAALSLSSRIKSEDFV
                     GAMSDLAGLRAPIDAFFEKVTVNVTDNDQLRLNRLKLLNQIRATMDSVAAFSRIEG"
     gene            1525..4200
                     /gene="ppdK"
                     /locus_tag="VF991_16455"
     CDS             1525..4200
                     /gene="ppdK"
                     /locus_tag="VF991_16455"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HEX9558088.1"
                     /translation="MAKWVYSFGDGKAEGRTDMRNLLGGKGANLAEMSSLGLPVPPGF
                     TITTEVCTYYYANNNAYPSELKEEVDKALGAVEKTVGAKFGDASNPLLVSVRSGARAS
                     MPGMMDTVLNLGLNDRTVLGLGKTSGDERFAWDSYRRFIQMYSNVVLDVGHHYFEEAL
                     ELRKEDLGVHMDTDLKADDWRAMVGEYKKIVEKRTGKPFPQEPREQLWGAIGAVFGSW
                     MNQRAITYRRLHQIPESWGTAVNVQAMVFGNMGEDCATGVAFTRDPSTGANLFYGEYL
                     VNAQGEDVVAGIRTPQHLTVQGKTAQKSEAPAMEEVMPDVFKQLDGVRRKLETHYCDM
                     QDIEFTVQRGKLYMLQTRNGKRTAKAALKIAVDMVREGLIDKKEAVARIVPASLDQLL
                     HPTLDPKAERKVIAKGLPASPGAASGKAVFSADDAEKQVRAGEKVILVRRETSPEDIH
                     GMHAAEGILTSTGGMTSHAAVVARGMGKPCVAGAGDVRIDGKAGTLSVRGTTVKAGEF
                     MTLDGSTGEIMLGIVPTVQPELSGDFAELMSWADEFRTLGIRTNAETPADAAQARQFG
                     AEGIGLCRTEHMFFEGDRIVAVRQMILADDEKSRRAALAKIQPMQRQDFVELFEIMAG
                     LPVTIRLLDPPLHEFLPKTDTDMASVAKDLGVAADEIEARAHKLHETNPMLGHRGVRL
                     GISYPEIYEMQARAIFEAVVEVQKKSGKTVIPEIMVPLVATRKELDLMKVVIDQVAGE
                     VSQLSGQKLEYLVGTMIELPRAALRAGDIAEAADFFSFGTNDLTQTTFGLSRDDSASF
                     LEKYRQRGILEHDPFASLDVEGVGELIEIACERGRKARNNLKLGICGEHGGDPASVFF
                     CHKAGLDYVSCSPYRVPIARLAAAQAALGGTLKTE"
     gene            4197..5126
                     /locus_tag="VF991_16460"
     CDS             4197..5126
                     /locus_tag="VF991_16460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HEX9558089.1"
                     /translation="MTLSGLRQGGKRALAAALAGLERDPDSAAAQALLDAAWREPNAH
                     VVGITGPPGVGKSSLCAALVAAWRKADRTVGVIAVDPSSKSSGGALLGDRVRIVHDSA
                     DEGVFVRSMAARDRLGGLAGQTLAAMVVMRALFDRVLIETVGVGQSETDVAGVADTVV
                     FCVQPGSGDSLQFMKAGIVEIPHLIAVTKADLGPAAERARADVAGALSLAAADGAWPL
                     RTLAVSSRSGAGLEALMAALEAHREHLSADARLALARHRQSEGWIAQSLGERFGRAGI
                     ARLGRLGFDLSLPPGAQPFERLRELAAILENAR"
     gene            5123..5548
                     /locus_tag="VF991_16465"
     CDS             5123..5548
                     /locus_tag="VF991_16465"
                     /inference="COORDINATES: protein motif:HMM:NF023395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEX9558090.1"
                     /translation="MSHPTDANCIFCKIVAGQIPCFKLLEDEHTIAFMDINPVNPGHA
                     LAVAKGHWPTVDVIPPDALGAVARTAQRIARAVMMELRPAGVNLLQANGTGAGQSVPH
                     LHIHIMPRRPNDGLVLNWQPKPGDKAEIEAICKRLKAAL"
     gene            complement(5558..6517)
                     /locus_tag="VF991_16470"
     CDS             complement(5558..6517)
                     /locus_tag="VF991_16470"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX9558091.1"
                     /translation="MVTIPPRKSKVPNILGDWDDVRFFLAVAKTGSFSAAATQLNTKQ
                     TTVGRRIQALERRLGAKLFDRHRHGMEVTPAARGVLVQAESMLSNATSIERHLAGLDR
                     EMAGVVRVAATEGLAAQWLVPRLTELRRRHSDIVVQVIVGDQVLDLATRQADLAIRFF
                     RPTSNQLVAARVGQFNMSIFAAPPYIEQFGLPQELDDLREHHLVDHTTLHSLPAMKPW
                     SEIIERSTNVVLRTNSSHSAMEAVKASWGMSIFPSYSSKTANLVEAPINLNIVRDIWL
                     VSHEETNKGARIRAVIDYIREQFRQDERDWFSITQRGNSVAAA"
     gene            6756..>6984
                     /locus_tag="VF991_16475"
     CDS             6756..>6984
                     /locus_tag="VF991_16475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558092.1"
                     /translation="MAAIGSEKKSTQLSAYADRLGRWVRSPSTRMAAFVGLLSYLSYA
                     YAHGSWANPALIGVSVFVGVFVPSYAKLSNKA"
BASE COUNT         1207 a         2213 c         2380 g         1184 t
ORIGIN      
        1 tggcgccgat caaattcgcc gacaccacgc gcggccatcg gttcctgagc aagggcgaga
       61 ttaaggtatc gggcttcgcc gactacgccg ccaagctcag gacggcgcac gtgatcctcg
      121 atccggcgga acgcaagaag atcgtgctgg cgggcgcgga aaagctctgt gccgaagcgc
      181 aagtctcgct caaggccgac gacggattgc tcgaagaggt ggccggcctg gtcgaatggc
      241 cggtgccgct gctcggcacc atcgacgcgc aattcttgga gttgccgccc gaggtgctga
      301 tcgtttcgat gagaacccac cagcgctatt tcgcgactac gaagccggga gggacgctcg
      361 ccaaccgctt cgtcgtcgtc gccaacacca cggcacccga cgatggcaag accatcgtcg
      421 acggcaatga gcgcgtgctg cgcgcccgtc tttccgacgc caagttcttc tgggaccagg
      481 accggaaggt cgggctggaa gatcggctgc cggcgctgcg ggacatcgtt ttccacgcca
      541 agctcggcac ccaggccgag cgggtcgagc gcatcgcggg ccttgcggta gagattgcga
      601 agttcgtgcc cggcgccgac gtcggccagg ttgctcaagc agctcggctc tgcaaagccg
      661 acctggtgac gggcatggtg ggcgaattcc ccgagctgca gggcgtgatg ggccgctact
      721 atgcgctcga cgaaaagctg ccggctgcgg tggccgatgc gatcggcgat cattacgcac
      781 cggcgggccc caacgaccgt tgtccgtcgg cgccggtgtc gatcgccgtg gcgctggccg
      841 acaagctcga ggcattgatc tctttttggt cgatcggcga gaagccgacc ggctcgcgcg
      901 acccctatgc gttgcggcgt gcggcgctcg gcaccatccg catcgtggtc gagaacaaac
      961 tccgcctgcc gctcaagcat ttcttcaagg ccgacgattt gatggaattc ttcgccgagc
     1021 gcctgaaagt gcaagtgcgc gagaagggcg tgcgccacga tgtggtcgat gcggtgttcg
     1081 cgttgggtgg cgaggacgat ctcgtgcgcc tgctggcgcg ggtcgaggcg gtgcaatcgt
     1141 tcctcggcac cgacgccggc aagaatttgc tcaccgccta tggccgcgcc gtcaacatcg
     1201 tccgagtcga agagcggaag gacaaggcgc ttgccgcgaa gatcgccggt gcgcccgatc
     1261 cgacattgtt cgagcaagag gaggagcgcg ctctgtttgc tcgactcgca gccttgtcgt
     1321 tgtcgagcag gatcaagagc gaagattttg tcggcgccat gagcgatttg gccgggctgc
     1381 gcgcgccgat cgacgctttt tttgaaaagg tcacagtgaa cgtcacagat aacgaccaat
     1441 tgcgccttaa caggctgaaa ttgctcaacc aaatacgggc caccatggat tcggtggcgg
     1501 ctttttccag gattgagggc tgagatggcc aagtgggtct acagtttcgg agatggcaag
     1561 gccgagggcc gcaccgacat gcgcaacctg ctgggcggca agggcgccaa cctggcggag
     1621 atgtcgagcc tcggcctgcc ggtgccgccg ggcttcacca tcaccaccga ggtctgcacc
     1681 tactactacg ccaacaacaa cgcctatccg tccgagctga aggaagaagt cgacaaggcg
     1741 ctgggcgcgg ttgaaaaaac cgtcggcgcc aagttcggtg acgccagcaa tccgctgctg
     1801 gtgtccgtgc gctcgggtgc gcgcgcttcg atgcccggta tgatggacac tgtcctcaat
     1861 cttggcctga acgatcgcac ggtgcttggc ctgggcaaga cgtcgggcga cgagcgtttc
     1921 gcctgggaca gctaccgccg cttcatccag atgtactcca acgtcgtgct cgatgtcggg
     1981 caccactatt tcgaggaggc gctggagctc aggaaggaag atctcggcgt ccacatggac
     2041 accgatctga aggccgatga ctggcgagcg atggtcggcg aatacaagaa gatcgtcgag
     2101 aagcgcaccg gcaagccgtt cccgcaggag ccgcgcgagc agctgtgggg cgcgatcggc
     2161 gcggtattcg gctcgtggat gaaccagcgc gccatcacct atcgccgcct gcatcagatc
     2221 cccgagagct ggggcaccgc ggtcaacgtg caggcgatgg tgttcggcaa catgggcgag
     2281 gattgcgcca ccggcgttgc cttcacgcgc gatccctcga ccggcgccaa tctgttctac
     2341 ggcgagtacc tggtgaacgc ccagggcgag gacgtcgtcg cgggcattcg cacaccccag
     2401 catctcaccg tacagggcaa gacggcccaa aaatccgagg cgccggccat ggaagaggtg
     2461 atgccggatg tgttcaagca gctcgacggc gtgcgccgca agctcgagac gcactactgc
     2521 gacatgcagg acatcgaatt caccgtgcag cgcggcaagc tctacatgct gcaaacgcgc
     2581 aacggcaagc gcaccgccaa ggccgcgctc aagatcgcgg tcgacatggt gcgcgagggc
     2641 ctgatcgaca agaaggaggc ggtggcgcgc atcgtgccgg cctcgctcga ccagcttctg
     2701 catcccacgc tcgatcccaa ggccgagcgc aaggtgatcg ccaagggcct gccggcctcg
     2761 cccggcgcgg cgtcgggcaa ggcggtgttc tcggccgacg acgccgagaa acaggtgcgc
     2821 gccggcgaga aggtgatcct ggtgcggcgc gagaccagtc ccgaggacat ccacggcatg
     2881 cacgcggccg agggcatcct gacctcgacc ggcggcatga ccagccatgc cgccgtggtg
     2941 gcgcgcggca tgggcaagcc ctgcgtggcc ggcgccggcg acgtgcgcat cgatggcaag
     3001 gctggcacgc tcagcgtccg cggcacgacg gtaaaggccg gcgagttcat gaccctcgac
     3061 ggcagcaccg gcgagatcat gctgggtatc gtgccgacgg tgcagcccga gctgtcgggc
     3121 gacttcgccg agctgatgtc atgggccgac gagttccgca cgctcggcat ccgcaccaac
     3181 gccgagactc cggcggacgc cgcccaggcg cgccagttcg gcgccgaggg catcgggctc
     3241 tgccgcaccg agcacatgtt cttcgagggc gatcgcatcg tcgcggtgcg ccagatgatc
     3301 ctggccgacg acgagaagag ccggcgggca gccttggcca agatccagcc gatgcagcgc
     3361 caggacttcg tcgagctgtt cgagatcatg gccgggctgc cggtcaccat ccgcctgctc
     3421 gacccgccat tgcacgaatt cctgcccaag accgacaccg acatggcgag cgtggccaag
     3481 gatctcggtg tcgccgccga cgagatcgag gcacgcgccc acaagctgca cgagaccaat
     3541 ccgatgctcg gccatcgcgg cgtgcggctc ggcatctcct accccgagat ctacgagatg
     3601 caggcccgcg ccatcttcga ggccgtggtc gaggtccaga agaagagcgg caagacggtg
     3661 ataccggaga tcatggtgcc gctggttgcg acccgtaagg agctcgatct catgaaggtg
     3721 gtgatcgacc aggtggccgg cgaagtgagc cagctctcgg gccagaagct cgagtacctg
     3781 gtcggcacca tgatcgaatt gccgcgtgcc gcgttgcgtg ccggcgacat cgccgaagcg
     3841 gcagacttct tcagtttcgg gaccaacgac ctgacgcaga cgactttcgg cctgagccgc
     3901 gacgattcgg cgtcgttcct ggagaagtat cggcagcgcg gcatcttaga gcacgacccg
     3961 ttcgcctcgc tcgacgtcga gggcgtgggc gaactgatcg agatcgcctg cgagcgcggc
     4021 cgcaaggcgc gcaacaacct gaagctcggc atctgcggcg agcatggcgg cgatccggcc
     4081 tcggtgttct tctgccacaa ggccggcctc gactacgtct cgtgctcgcc ctaccgcgtg
     4141 ccgatcgcgc ggctcgccgc cgcccaggcg gcgctgggtg ggacgctcaa gacggaatga
     4201 cgctttccgg gcttcggcaa gggggcaagc gtgccctggc ggccgcgctc gctggcctgg
     4261 agcgcgatcc cgacagcgcg gcggcgcagg cgctgctcga cgccgcctgg cgcgagccca
     4321 acgctcatgt cgtgggcatc accggcccgc cgggggtcgg caagtcgtcg ctgtgcgcgg
     4381 cgctggtcgc agcgtggcgc aaggcggaca ggaccgtcgg cgtgatcgcg gtcgacccct
     4441 cctccaagtc gagcggcggc gcgcttctcg gcgaccgggt gcgcatcgtc catgacagcg
     4501 ccgacgaggg cgtcttcgtt cgctcgatgg ccgcccgcga tcggctgggc ggactcgccg
     4561 gccagacgct ggccgccatg gtggtgatgc gcgccctgtt cgatcgcgtg ctgatcgaga
     4621 cggtgggcgt cggccaatcg gagaccgacg tggcgggcgt cgccgatacc gtggtgttct
     4681 gcgtgcagcc cggctcgggc gattccctgc aattcatgaa ggcgggcatc gtcgagatcc
     4741 cgcacctgat cgccgtcacc aaggccgatc ttgggccggc ggccgaacgg gcgcgcgccg
     4801 acgtggcggg tgccttgtcg ctggccgcgg ccgacggtgc ctggccgttg cgcacgctgg
     4861 ccgtctcctc gcgcagcggt gccggcctcg aggcgctgat ggcggcgttg gaggcgcatc
     4921 gcgaacacct gtcggccgac gcaaggctcg cgctcgcccg ccaccgccag agcgagggct
     4981 ggattgccca gtcgctcggc gagcgcttcg gccgcgcggg cattgccagg ctcggccggc
     5041 tcggcttcga tctttccctg ccgccggggg cgcagccgtt cgagcggctg cgcgagctgg
     5101 cggccatcct ggagaatgcg cgatgagcca tccgaccgac gccaattgca tcttttgcaa
     5161 gatcgtcgcg ggtcagattc cctgcttcaa gcttctggag gacgagcaca ccatcgcctt
     5221 catggacatc aacccggtga atccgggcca tgccctcgcc gtcgccaagg gccactggcc
     5281 gacggtcgac gtcatcccgc cggatgcgct gggcgcagtg gcgaggacgg cgcaaaggat
     5341 cgcccgggcg gtgatgatgg aactcaggcc ggcgggcgtg aacctgctgc aagccaacgg
     5401 caccggcgcg ggccagagcg tgccgcacct gcacattcac atcatgccgc gccgcccgaa
     5461 cgacggcctg gtgctcaatt ggcaaccgaa gcccggcgac aaggccgaga tcgaggcgat
     5521 ctgcaagcgg ctgaaagcgg cgctttagcg cgagcggcta tgcggccgcc acggagttgc
     5581 cgcgctgggt gatcgagaac cagtcgcgct cgtcctggcg gaactgctcg cgaatgtagt
     5641 cgatcacggc gcggatgcgg gcgcccttgt tggtttcctc gtgcgacacc agccagatgt
     5701 cgcgcacgat attgaggttg atgggcgcct cgacgaggtt cgccgtcttg ctgctgtagc
     5761 ttggaaagat cgacatgccc caggatgcct tcaccgcctc catcgccgag tgcgaggagt
     5821 tggtgcgcaa caccacgttg gtgctgcgtt cgatgatctc gctccacggc ttcatcgccg
     5881 gcaggctgtg cagcgtcgta tggtccacga gatggtgttc gcgcagatcg tcgagctcct
     5941 gcggcaggcc gaactgctcg atgtagggcg gcgcggcgaa gatcgacatg ttgaactggc
     6001 cgacccgggc ggcgacgagc tggttggagg tcggccggaa gaagcggatg gcgagatcgg
     6061 cctggcgcgt cgcgagatcg agcacctggt cgcccacgat cacctgcacg acgatgtcgg
     6121 aatggcggcg ccgcaactcg gtgaggcggg gcaccagcca ctgcgcggcg agaccctcgg
     6181 tcgccgccac gcgcacgacg ccggccatct cgcggtcgag gccggccaga tggcgctcga
     6241 tcgacgtggc gttcgacagc atcgattcgg cctggaccag cacgccgcgg gcggcgggcg
     6301 tcacttccat gccatggcgg tggcggtcga acagcttggc gcccagccgg cgctcgagcg
     6361 cctggatgcg ccggccgacc gtcgtctgct tggtgttgag ctgggtcgct gcggcgctga
     6421 agctgccggt ttttgcaacg gcaaggaaaa aacgcacatc gtcccagtcg ccgagaatat
     6481 tggggacctt gctcttgcgc ggaggaatcg taaccatcgt aacaatcgat acaataaggt
     6541 tgtcgggcct aagtttactt gaaaggggcc acgtggttta tcttacacca ttatcagtga
     6601 aatgtcggtt tctgtctcgt ttatagggca ctaggcggct tttttcatca cctgcttgga
     6661 ttgagcttgt gtgtatctag tcctcgtatt cgttagtcaa tcaacctgta gtttgtcggc
     6721 ggattgacgc ttcgtaacgg ggggcaggtg cttctgtggc cgccatcggc tcggagaaga
     6781 aatcgacgca actgtcggcc tatgccgaca ggttgggccg ctgggtgcgc agtccgtcga
     6841 cgcgcatggc ggcctttgtc ggcctgcttt catacctgag ctatgcgtac gcgcacggca
     6901 gttgggctaa cccggcgctg atcggcgtgt cagtctttgt cggggttttt gtcccgagct
     6961 acgccaagct tagcaacaag gccg
//
LOCUS       DASWGA010000705         2582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_80427, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000705 DASWGA010000000
VERSION     DASWGA010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80427"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VF991_16480"
     CDS             <1..331
                     /locus_tag="VF991_16480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEX9558093.1"
                     /translation="DLLHGEAVGAGMAMAFDLSARLGLCPPADAERVRRHLGAVGLPV
                     RLRSIGGDNRRRWDAQRLIGHMRGDKKAEGGKLAFILARGIGKAFVSRDVDEGALGAL
                     LDDAIAA"
     gene            347..1651
                     /locus_tag="VF991_16485"
     CDS             347..1651
                     /locus_tag="VF991_16485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEX9558094.1"
                     /translation="MEADLHFELPLEVAVPMVVLCLMLGAYMSAAETAITGASRPRMH
                     RLAQQGNKRAALVNGLLDRKDEAVSAVLLGNSVVNILSASLTTAVLTAVFGAAGIVYA
                     TVAVGVMVVIFAEVMPKTWALLRADRVALILAPSIVVTLSILGPMARGVAWISRFFLG
                     LIGVHVDRRPEIDEHADVLRGAIELHGEGQTGEAAPAEKAMLRSVLDLGDRTVGDVMT
                     HRGNVVLIDGEQPMDSIVTQMLAAPYTRIPVYRGEPDNIVGVIHAKDLFRAVKAAGGP
                     AEVKLQEVMTPPWFIPESTVLFDQLQAFRARHEHFAIVVDEYGALRGIVTLEDIIEEI
                     TGDIEDEHDAIKRGVVRLEDGSLICQGDVPIRDLNREFAWGLPEDVAITIAGLVLHEA
                     RRIPEVGQTYAFYGFRFEILKREGTRIAELRIVPPAAIQAAI"
     gene            1672..2322
                     /locus_tag="VF991_16490"
     CDS             1672..2322
                     /locus_tag="VF991_16490"
                     /inference="COORDINATES: protein motif:HMM:NF022586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2889 domain-containing protein"
                     /protein_id="HEX9558095.1"
                     /translation="MPLSPPVGRQHLHTRRVTCQGFFREDGLWDIEGRITDEKTYEHA
                     SEWRGAIKPGDFVHDMSIRLTLDHKFTIVDVEAVTDKSPYRICGDVAPDFKKLIGLRI
                     GGGFHREVRARLGGVHGCTHIVELLGPVATTAFQTMSSGKARELDRAHRAKQGHPPKP
                     EAAPKPRRKPYVIDTCHAWAADGPVVKRFAPDFYTGPDAKAVRAAAAGKEIEMEGD"
BASE COUNT          410 a          895 c          870 g          407 t
ORIGIN      
        1 ggacctgctg cacggcgagg cggtgggcgc cggcatggcg atggcgttcg acctttcggc
       61 ccgcctcggc ctctgcccgc cggccgacgc cgagcgcgtg cgccgtcatc tcggcgcggt
      121 cggtctgccg gtgcgcctgc gctcgatcgg cggcgacaat cggcggcgct gggacgccca
      181 gcgcctgatc ggccacatgc gcggcgacaa gaaggccgaa ggcggcaagc ttgccttcat
      241 cctggcgcgc ggcatcggca aggcgttcgt cagccgcgac gtcgacgagg gcgcgctcgg
      301 cgccttgctc gacgacgcca tcgccgcctg accccgcgac cttggcatgg aagccgacct
      361 ccatttcgaa ctgccgctgg aggttgccgt gccgatggtg gtgctctgcc tgatgctcgg
      421 cgcctacatg tcggcggcgg aaacggcgat caccggcgcc tcgcgcccgc gcatgcaccg
      481 gctcgcccag cagggcaaca agcgcgccgc gctggtgaac ggcctgctcg accgcaagga
      541 cgaggcggtg agcgcggtcc tgctgggcaa cagcgtggtc aacatcctct cggcctcgct
      601 caccacggcg gtgctgaccg ccgtgttcgg cgccgccggc atcgtctatg ccacggtggc
      661 cgtcggcgtc atggtggtga tcttcgccga ggtgatgccc aagacctggg cgctgctgcg
      721 cgccgaccgg gtcgcgctga tcctggcgcc gtcgatcgtg gtgacgctgt cgatcctggg
      781 gccgatggcc cgcggcgtcg cctggatctc gcgcttcttc ctggggctga tcggcgtcca
      841 tgtcgaccgc aggccggaga tcgacgagca tgccgacgtc ctgcgcggcg ccatcgagct
      901 gcacggcgag ggccagaccg gcgaggcggc gcccgccgag aaggcgatgc tgcgctcggt
      961 gctcgacctc ggcgatcgca cggtcggcga cgtgatgacc catcgcggca acgtggtgct
     1021 gatcgacggc gagcaaccca tggactcgat cgtcacccag atgctggccg cgccttatac
     1081 gcgcatcccg gtttatcgcg gcgagcccga caatatcgtc ggcgtgatcc acgccaagga
     1141 cctgttccgc gccgtcaagg ccgccggcgg tccggccgag gtcaagctcc aagaggtcat
     1201 gacgccgccc tggttcattc ccgaatcgac ggtgctgttc gaccagctcc aggccttccg
     1261 cgcccgccac gagcattttg ccatcgtcgt cgacgaatac ggcgcgctgc gcggcatcgt
     1321 cacgctcgag gacatcatcg aggagatcac cggcgatatc gaggacgagc acgacgccat
     1381 caagcgcggc gtggtgcgac tcgaggacgg cagcctgatc tgccagggcg acgtgccgat
     1441 ccgcgacctc aaccgcgaat tcgcctgggg cctgccggag gatgtggcca tcaccatcgc
     1501 cggcctggtg ctgcacgagg ccaggcgcat ccccgaagtc gggcaaacct atgcatttta
     1561 cggattccgc ttcgaaattc tgaagcgcga gggcacgcgc atcgccgagt tgcgcatcgt
     1621 gccgccggcc gccatacagg ccgcgatata accagccaag agggttctgc catgccgctt
     1681 tcgccaccgg tcgggcgaca gcatctgcac acgcgtcgcg tcacctgcca gggctttttc
     1741 cgcgaggacg ggctgtggga catcgagggt cgcatcaccg acgagaagac ctacgagcat
     1801 gccagcgaat ggcgcggggc gatcaagccc ggcgatttcg tccatgacat gtcgatccgc
     1861 ctcaccctcg accacaaatt caccatcgtc gatgtcgaag cggtgaccga caagtcgccc
     1921 taccggatct gcggcgacgt ggcgcctgac ttcaagaagc tgatcgggct tcgcatcggc
     1981 ggcggcttcc atcgcgaggt gcgcgcccgg ctgggcggcg tgcatggctg cacccatatc
     2041 gtcgagctgc tgggtccggt ggcgaccacg gccttccaga ccatgtcgtc gggcaaggcg
     2101 cgcgagctcg accgcgccca tcgcgccaag cagggccatc cgccgaagcc tgaagcggca
     2161 cccaaaccgc ggcgcaagcc ctacgtgatc gacacctgcc acgcttgggc cgccgacggc
     2221 ccggtcgtga agcgctttgc gccagacttt tacaccggcc ccgatgccaa agccgtgcgc
     2281 gccgcagcgg ccggcaagga gatcgagatg gagggcgatt gagatccttc ctgtaaccta
     2341 aaggtccctc gggcttcgcc cccgggatga cagggtgcgt ggatcacaag gcatctgtca
     2401 tcgcgcgcgg ggtagtcccc gcgctgaagc gcagcgaggg acctttaagg ccacaggaaa
     2461 ggtcctccgc tacgcgcgct tgtcatcctc cgccggcgtc agcgtggtca gcgcgagcgc
     2521 gtgcaggccg gcgtcgaatt cgtcctggag cgcggcatag accaggcgtt ggcgcgccac
     2581 cc
//
LOCUS       DASWGA010000706         3333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_841264, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000706 DASWGA010000000
VERSION     DASWGA010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3333
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841264"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..973)
                     /locus_tag="VF991_16495"
     CDS             complement(<1..973)
                     /locus_tag="VF991_16495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family transcriptional regulator"
                     /protein_id="HEX9558096.1"
                     /translation="MPLQCWKTAIFGERRMDEEAPVVGASQPMTALSAGSRGTSQSGV
                     GLYNERLILSLIRRQRSLAKVEIARLTGLSTQTTTVIINRLEADGLLLAGEPQRGRIG
                     QPSVPYTLNPDGAFGLGLMIGRRSCDLVLMDFTAGIRARRRMIYPYPAPGEILAFAER
                     EMPNLLAELPVAQHGRISGLGVAMPFELWNWEADLETPPGALGQWRDFDVVAELSRRF
                     ARWPVRLCNDATSACAAELTFGAGASYRDFAYFYVGTFIGGGIVVNGSLFPGRSGNAG
                     ALGSMPIMRREPNGDASLQQLIRTASIYLLERRLIAAGRRGTDIWLSP"
     gene            1213..2232
                     /locus_tag="VF991_16500"
     CDS             1213..2232
                     /locus_tag="VF991_16500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018094081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEX9558097.1"
                     /translation="MRQPVVFFAALGIALGVTAANAADKPVVGLITKTNTNPFFVKMK
                     AGAEEAATANGIELRSFAGKVDGDNDGQVAAVENLIASGAKGILITPNDSRAIVPAIE
                     KARAAGILVIALDTPLDPPTAADATFATDNFLAGELIGQWAVKTLGPKAPSAKIALLD
                     LNVNQISVDVARDQGFLKGFGIDLGNPARIGDEKDPRIVGHDVTLGSEEGGRKAMENL
                     LQKDPGISVVYTINEPAAAGAYEALRSVGRDKDVLIISVDGGCPGVRNVKDGVIGATS
                     MQFPLLMAAKGVEAVKKFAETGSKPQPTPGHDFFNTGVELVTDKPAAGLTSIDSAAAL
                     KKCWG"
     gene            2298..>3333
                     /locus_tag="VF991_16505"
     CDS             2298..>3333
                     /locus_tag="VF991_16505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019998096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558098.1"
                     /translation="MAPPTAGGQSCVEEGAMTDIGNSQPAIQVLEAQPDKKDLNDRVA
                     EFEVRAKSPLRKLQHFLHANPTAVPAIVLFLGIAAFGFIVGSRFLSSFNLSLIIQQVT
                     IIGVIGVAQTLIVITAGIDLSVGAIMVLCSVIMGKLAVTAGLPAPLALLIGIAAGAGC
                     GAMNGVLVTRLKLPPFIVTLGTWSIFFALNLWYSASETIRSQDVAKAAPFLQVLGTPV
                     DILGARFTYGSFFMLALVGLIWFVLNRTAFGRHLYAVGDDPDAARLAGIRTGRVLFTV
                     YVTAGVICALGAWALIGRIGSISPQAGQTANLDSITAVVVGGASLFGGRGSIVGTLVG
                     ALIVGVFRNGL"
BASE COUNT          585 a         1099 c         1084 g          565 t
ORIGIN      
        1 ccggcgacag ccagatgtcg gtgccgcgcc ggccggcggc gatcaaccga cgctccaaca
       61 gatagatcga ggcggtgcgg atcagttgct gcaagctcgc atcaccattc ggctcgcgac
      121 gcatgatcgg catcgacccg agtgcgccgg cattgccgct gcgaccggga aacaggctgc
      181 cgttgacgac gatgccgccg ccgatgaagg tcccgacata gaaataggcg aagtcgcgat
      241 aggatgcgcc ggcgccgaaa gtgagctcgg cggcgcacgc cgacgtcgcg tcgttgcaga
      301 ggcggaccgg ccagcgcgcg aaacgacgcg acagctcggc cacgacatcg aaatcccgcc
      361 attgtccgag cgcgcccggc ggcgtctcga gatcggcctc ccagttccag agttcgaacg
      421 gcatcgcgac cccgaggccg ctgatgcggc cgtgctgcgc gaccggcagt tcggccagca
      481 ggttcggcat ctcccgttcg gcgaaggcga ggatctctcc gggcgcggga tagggataga
      541 tcatgcggcg tcgcgcgcgg atgccggcgg tgaaatccat caacaccagg tcacagctgc
      601 gccgaccgat catgaggccg agcccgaagg cgccgtccgg attgagcgta tacggcaccg
      661 atggctggcc gatacggccg cgctgcggct cgccggcaag tagcagtcca tccgcctcca
      721 ggcgattgat gatgaccgtg gtggtctggg tcgaaaggcc ggtcagacgc gcgatctcga
      781 ccttggcgag actgcgctgg cggcggatca gggacaggat caggcgctca ttataaaggc
      841 cgacgccgct ctggctggtg ccgcggctcc cggcggacag agcggtcatg ggttggctgg
      901 cgcccacaac cggcgcttct tcatccatcc tccgctcccc aaaaatagcc gttttccagc
      961 actgcaacgg cattgcgacg atccagggcc tacgtccagg cttcgctgaa gcttcgctcc
     1021 ggtgcgccag agcgcgcacc gcattcctga caatgggcgg gttcggactc gcctgtcaat
     1081 aattaaatcg ggatgattta tttattgaca agttgccgcg ggcaaggcct catagcgaaa
     1141 ctgaagggca acagggtatc gcgcactgga tccgcgcagc ctcaatgtca gcccgatggg
     1201 agggaagaaa taatgcgtca gccagtcgtg ttctttgccg cgctcgggat cgccctgggc
     1261 gtcaccgccg ccaacgccgc cgacaagccg gtcgtcggcc tcatcaccaa gaccaatacc
     1321 aatccattct tcgtcaagat gaaggcgggc gcagaagagg cggcgaccgc caatggcatc
     1381 gagctgcgct cgttcgccgg caaggtcgac ggcgacaatg atggccaggt cgctgccgtc
     1441 gaaaatctga tcgcctccgg cgccaagggc atcctgatca cgccgaacga ctcccgcgcc
     1501 atcgtgccgg ccatcgaaaa agcgcgcgcc gccggcattc tggtgattgc gctcgacacg
     1561 ccgctcgacc cgccgacggc ggcggacgcg accttcgcca ccgacaattt cctggccggc
     1621 gaattgatcg gtcagtgggc ggtgaagacg ctggggccga aggcgccctc agccaagatc
     1681 gcactgctcg acctcaacgt gaaccagatc tcggtcgacg tcgcgcgcga ccagggattc
     1741 ctgaaaggct tcggcatcga tctcggcaat ccggcaagga tcggcgacga gaaggatccc
     1801 cgcatcgtcg gacatgacgt caccctcggc agcgaggaag gcggccgcaa ggcgatggaa
     1861 aacctgttgc agaaggatcc gggcatttcc gtggtctata ccatcaacga accggcggct
     1921 gcgggcgcct atgaggcgct gcgttcggtc ggccgcgaca aggacgtgct gatcatctcg
     1981 gtcgacggcg gctgtcccgg tgtgcgcaac gtcaaggacg gcgtgatcgg cgcgacctcg
     2041 atgcagtttc cactgttgat ggcggcaaag ggcgtcgagg ccgtgaagaa gttcgccgag
     2101 accggcagca aaccgcagcc tacgcccggg cacgatttct tcaataccgg cgtcgagctc
     2161 gtgaccgaca agcccgccgc gggcctgacc tcgatcgaca gcgccgccgc cttgaagaag
     2221 tgctggggct aggcgaagct cttcaattcg gctgaggcca ggcgccgcgc gatgtcgcga
     2281 cgcctggcag agaaccgatg gccccgccga ccgccggcgg ccaatcctgt gtcgaggaag
     2341 gcgcgatgac cgatatcggc aacagccagc ccgccatcca ggtccttgag gcccaaccgg
     2401 acaagaagga tctgaacgac cgcgtggccg aattcgaggt ccgcgccaaa tccccgctgc
     2461 gcaagctgca acattttctc cacgccaatc cgacggcggt gccggcgatc gtgctgtttc
     2521 tcggcatcgc ggctttcggt ttcatcgtcg gctcgcgctt cctctcctcc ttcaacctgt
     2581 cgctcatcat ccagcaggtg acgatcatcg gcgtgatcgg cgtggcccag acgctgatcg
     2641 tgatcaccgc cggcatcgat ctgtcggtag gcgccatcat ggtgctgtgc tcggtgatca
     2701 tgggcaagct tgcggtgacg gccggcctgc ccgcccccct cgcgctcctg atcggcatcg
     2761 cggccggcgc aggctgtggc gcgatgaacg gtgtcctggt gacgcggctc aagctgccgc
     2821 ccttcatcgt gacgctcggc acctggtcga tctttttcgc cctcaacctt tggtattccg
     2881 cctccgaaac catccgctcg caggacgtcg cgaaggccgc gccgttcctg caggtgctgg
     2941 gaacgccggt ggacattctt ggtgcccgct tcacctatgg ctcgttcttc atgctggccc
     3001 tggtcggact gatctggttc gtgctcaacc gcaccgcgtt cggccgccat ctctacgcgg
     3061 tcggcgacga tcccgatgcg gcgcggctcg ccggcatccg cacggggcgc gtcctgttca
     3121 cggtctatgt gacggcgggc gtgatctgcg cgctcggcgc gtgggcgctg atcgggcgga
     3181 tcggctcgat cagtccgcag gccggccaga ccgccaatct cgacagcatc acggcggtcg
     3241 tggtcggcgg cgcgagcctg ttcggtggac gcggctcgat cgtcggcacg ctggtcggcg
     3301 ccctgatcgt cggcgtgttc cgcaacgggc tcg
//
LOCUS       DASWGA010000707         2588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1093749, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000707 DASWGA010000000
VERSION     DASWGA010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2588
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1093749"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VF991_16510"
     CDS             complement(<1..186)
                     /locus_tag="VF991_16510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003523955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9558099.1"
                     /translation="MDQPAGLQTGTAAAAFQSPLLSLADLGKRFGTLQALDGVSLDVC
                     AGTVQCLLGENGAGKSTL"
     gene            complement(209..1198)
                     /locus_tag="VF991_16515"
     CDS             complement(209..1198)
                     /locus_tag="VF991_16515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003550515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HEX9558100.1"
                     /translation="MNKFDRRGFLTGTAGAAGLVMLGGLGAPARAAGPLTVGVLIPGS
                     KSDKGWMESGYDGLKAAEKKLGAKITVKYIENVKFGDMEQVLVTLAGKNELVIGVGGQ
                     TQASVFKVAPRFPKVKFAIIGGNADPKKPDNVSGYDVRQAEIAFAAGAAAAMLSKTGG
                     VSYVGGLEIPAIVNAGKEFGNGARYINPKIKYFENYTGDFDDVAKAKEATLAAIAQGA
                     DIHYHILNLGLRGMEQAAREKGTHIIGSYTDRCGTDPLYVAYSITGVGFQVEYAIEQT
                     VAGTWKPEFKPFGLAMGPKSSDMIVCKATPEQKAKLEEIKKDLLSGKIKVLDA"
     gene            1312..2088
                     /locus_tag="VF991_16520"
     CDS             1312..2088
                     /locus_tag="VF991_16520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003550514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEX9558101.1"
                     /translation="MADKLHPLGAPRAGYVWGANSREVDMATPPAKPVPLKIAAAPQN
                     VTIDLKRSAMVVIDMQNDFCTKGGWVDYLGVDYTPDRQPIKPLQKLLPALRKAGMPVI
                     WVNWGTRPDLANMPPNQIHLYKPQGTGVGLGDPVPGKDGAVLQKDSWSAAVVDELAQE
                     PGDIKVDKHRISGFWDTPLDSILRNLGTRTVLFSGVNTDQCVLHSLTDANFLGYGCVL
                     VEDCCGTTSPDFCTEATVWNVKKCFGFVTDSGKILKALKK"
     gene            2097..>2588
                     /locus_tag="VF991_16525"
     CDS             2097..>2588
                     /locus_tag="VF991_16525"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9558102.1"
                     /translation="MRDLVLLPGFMCDADLWADMVPDLEPRGRIHYGNVYQDSTLEGM
                     AGRVLAEAPERFVLVGFSMGGFVARVLALMAPERVSGVAFIASSARGYSKEETERRKA
                     GYRPGDRLPRATDAPSTALGLHPDRENDPVLIARLRGMQRRLGREVRARQAALVRRDG
                     YADL"
BASE COUNT          423 a          846 c          858 g          461 t
ORIGIN      
        1 gagcgtcgac ttgccggcgc cgttctcgcc cagaaggcac tgcaccgtgc cggcgcagac
       61 gtcgaggctg acgccgtcca gggcctgcaa tgtgccgaag cgcttgccga ggtcggcgag
      121 cgagagcagc ggcgattgga aagccgccgc tgcagtcccg gtctgcaggc cggccggctg
      181 gtccatcgtg ccgctgctcc gcgtcagatc aggcgtctaa aaccttgatc ttgcccgaca
      241 gcaggtcctt cttgatctcc tcgagcttgg ccttctgctc gggcgtggcc ttgcagacga
      301 tcatgtcgga agatttcgga cccatggcga ggccgaacgg cttgaactcc ggcttccacg
      361 tgccggccac cgtctgctcg atggcgtatt cgacctggaa accaacgccg gtgatcgagt
      421 aggcgacata aagcgggtcg gtgccgcagc ggtcggtgta gctgccgatg atgtgcgtgc
      481 ccttctcgcg cgccgcctgc tccatgccgc gcaggccgag attgagaatg tggtagtgga
      541 tgtcggcgcc ctgggcgatg gccgcgagcg tcgcttcctt ggccttggcg acgtcgtcga
      601 aatcgccggt gtagttctcg aagtacttga tcttgggatt gatgtagcgc gcgccattgc
      661 cgaactcctt gccggcattg acgatggccg gaatctccag cccgccgacg taggacactc
      721 cgccggtctt cgacagcatg gcggccgccg cgccggctgc gaaggcgatc tcggcctggc
      781 gcacgtcgta acccgagacg ttgtcgggtt tcttggggtc ggcgttgccg ccgatgatgg
      841 cgaatttcac cttgggaaag cgcggcgcca ccttgaagac cgaggcctgg gtctggccgc
      901 cgacgccgat caccagctcg ttcttgccgg ccagcgtcac cagcacctgc tccatgtcgc
      961 cgaacttcac gttctcgatg tatttgacgg tgatcttggc gccgagcttc ttttcggccg
     1021 ccttcagccc gtcatagccc gattccatcc agcccttgtc ggacttcgag cccgggatca
     1081 gcacgccgac agtgagcggg ccggccgccc gcgctggggc gccgaggccg cccagcatca
     1141 ccaaaccggc ggcgccggcg gtccctgtca aaaatccacg acgatcgaac ttgttcatgg
     1201 ctatgctccc cgcccaatgg catcaatccg ggcaaggaga ggcaatcggc gtgccaagtg
     1261 gcagggaact tgcttcccgg cgttgcaatc gagggattct tggggagatc gatggccgac
     1321 aagctgcatc cgctgggcgc accgcgcgcc ggttatgttt ggggcgccaa cagccgcgaa
     1381 gtcgacatgg ccacgccgcc ggccaagccg gttccgctca agatcgcggc cgcaccgcag
     1441 aacgtcacca tcgatctcaa gcgcagcgcc atggtcgtga tcgacatgca gaacgatttc
     1501 tgcaccaagg gcggctgggt cgattatctc ggcgtcgact acacgcccga ccgccagccc
     1561 atcaagccgc tgcagaagct tctgccggcg ctgcgcaagg ccggcatgcc ggtgatctgg
     1621 gtcaactggg gcacccgacc cgacctcgcc aacatgccgc ccaaccagat ccacctctac
     1681 aagccccagg ggacgggcgt ggggttgggc gatccggtac ccggcaaaga cggggcggtg
     1741 ctgcagaagg attcgtggtc ggcggcggtg gtcgacgagc tcgcgcagga gcccggggat
     1801 atcaaggtcg acaaacatcg aatcagcggc ttctgggaca cgccgctcga ttccatcctg
     1861 cgcaatctcg gcacgcgcac cgtgctgttc tccggcgtca acaccgacca gtgcgtgttg
     1921 cattcgctga ccgatgccaa cttcctgggc tacggctgcg tgctggtcga ggattgctgc
     1981 ggcacgacct cgcccgattt ctgcaccgag gccacggtgt ggaacgtcaa gaaatgcttc
     2041 ggcttcgtca ccgattcggg gaagatcctg aaggcgttga agaagtagcc aagcgattgc
     2101 gcgatctggt tctgctgccc ggcttcatgt gcgatgcgga tctgtgggcc gacatggtcc
     2161 cggatctaga accccggggg cgcatccact acggcaacgt ctaccaggac tccacgctcg
     2221 agggcatggc cgggcgcgtg ctcgccgaag cgcccgaacg cttcgtgctg gtcggcttct
     2281 cgatgggcgg gttcgtcgcc cgggtgctgg cattgatggc gcccgagcgg gtgagcggtg
     2341 tcgccttcat cgcctcgtcg gcgcgcggct attccaagga agagaccgag cggcgcaagg
     2401 caggctaccg gccgggcgac cggctgccgc gcgcaacgga tgcgccatcg acggccttgg
     2461 gcctgcatcc cgaccgcgag aacgatcccg tgctgatcgc gcgcctgcgc ggcatgcagc
     2521 ggcggctggg ccgcgaggtg cgggcgcgcc aggcggcgct ggtgcggcgc gacggctatg
     2581 ccgacctc
//
LOCUS       DASWGA010000708         1564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1342689, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000708 DASWGA010000000
VERSION     DASWGA010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1342689"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VF991_16530"
     CDS             <1..475
                     /locus_tag="VF991_16530"
                     /inference="COORDINATES: protein motif:HMM:NF012626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEX9558103.1"
                     /translation="KSKMAEIGAPLAGEMSGHIFFADTFYGFDDALYCGLRLLNILAN
                     AKESLADMRDALPQPVNTPELRFDCPDERKFDVVEEVKARLQKAGAKFSDIDGVRVST
                     KDGWWLLRASNTQPVLVARCEAADEAGLERLMTELKAALAASGVSLPDEASAGHH"
     gene            475..909
                     /locus_tag="VF991_16535"
     CDS             475..909
                     /locus_tag="VF991_16535"
                     /inference="COORDINATES: protein motif:HMM:NF017868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HEX9558104.1"
                     /translation="MRFFFYGTLLDSDVTALVLGRRLPPTAFVPASLPGHARRRAKGV
                     SYPVLVRDPGGEVRGAIVGGLSARDVARLSAYEGPRYRIAPLKVRVAGTLTTVSVFEP
                     LENRFQPVDGSWDLALWQRRDKRPFVSRLRRAFSARPAYSTP"
     gene            complement(878..>1564)
                     /locus_tag="VF991_16540"
     CDS             complement(878..>1564)
                     /locus_tag="VF991_16540"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558105.1"
                     /translation="EGADGLKTGYTVASGFNLVMSAVRDNRRLIGVVMGGDSAWQRDR
                     MMADLMDYGFMTAQSMRLSPWTSIRKPPSARYTAINFDPSLIVPETTPRLAVARVEPQ
                     VAAPPPVQAPPTEQRVAGPAVPPPAQGSAAPSGLPIGTWVIQVGSFNDSQAAQLALER
                     ASSALPDTMRSSAAATVDEIQMANKTFHRARLTNLSQGQAVDGCKQLEKRKIYCSAIQ
                     VTAWNTPGAR"
BASE COUNT          227 a          513 c          574 g          250 t
ORIGIN      
        1 caagagcaag atggcggaga tcggcgcgcc gctggccggc gagatgagcg gccacatctt
       61 cttcgccgac accttctacg gcttcgacga cgcgctctat tgcgggcttc ggctcttgaa
      121 tatcctggcc aatgccaagg aaagcctggc cgacatgcgc gacgcgctgc cccagccggt
      181 caacacgccg gagctgcgct tcgactgccc ggacgagcgc aagttcgacg tcgtcgagga
      241 ggtcaaggcg cgcctgcaga aggctggcgc caagttctcc gacatcgacg gcgtgcgcgt
      301 cagcaccaag gacggctggt ggctgctgcg cgcttccaac acccagcccg tgctggtggc
      361 ccgttgcgag gcggccgacg aggcggggct ggagcggctc atgaccgagc tcaaggcggc
      421 gctggcggcc agcggcgtca gcctgcccga cgaggcgtcc gccgggcatc actgatgcgc
      481 ttcttcttct acggcacgct gctcgattcc gacgtcaccg ccctggtgct gggccggcgg
      541 ctgccgccga cggcgttcgt gccggcgagc ctgcccggtc atgcacgccg gcgggccaag
      601 ggcgtgagct atccggtgtt ggtgcgcgat cccggtggcg aagtccgggg cgcgatcgtg
      661 ggcggcctga gcgcgcgcga tgtcgcacgg ctgtctgcct acgagggacc gcgctaccgc
      721 atcgcgccat tgaaagtgag ggtagcgggg accctgacga cggtgtcggt gttcgagccc
      781 ctggaaaacc gctttcagcc tgtggatggc tcgtgggatc tggcgctctg gcagcgccgc
      841 gacaagcggc cgttcgtcag tcggctgagg cgcgccttca gcgcgcgccc ggcgtattcc
      901 acgccgtgac ctggatcgcc gagcagtaga tcttgcgctt ctccagctgc ttgcagccgt
      961 cgaccgcctg gccctgcgag aggttggtca ggcgggcgcg gtggaaggtc ttgttggcca
     1021 tctggatctc gtcgacggtc gcggcggcgg acgagcgcat ggtatcgggc agggccgagg
     1081 aggcgcgctc cagcgcaagc tgggcggcct gcgagtcgtt gaacgatccg acctggatca
     1141 cccaggtgcc gatcggcagg ccgctaggcg cggcgcttcc ctgggccggc ggcggaacgg
     1201 ccgggccggc gacgcgttgc tcggtcggcg gcgcctgcac cggcggcggg gccgcgactt
     1261 gaggctcgac ccgggcaacg gcgagtcgcg gcgtggtctc cggaacgatc aggctgggat
     1321 cgaaattgat ggccgtgtag cgcgccgacg gcggcttgcg aatcgaggtc caaggcgaca
     1381 gccgcatcga ctgcgcggtc atgaatccgt agtccatgag gtcggccatc atgcgatcgc
     1441 gctgccaggc gctgtcgccg cccatgacga cgccgatcag acggcgattg tcgcgcaccg
     1501 ccgacatcac gaggttgaag cccgaggcga ccgtgtagcc ggtcttgagc ccgtcggcgc
     1561 cttc
//
LOCUS       DASWGA010000709         4486 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_841587, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000709 DASWGA010000000
VERSION     DASWGA010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4486
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841587"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..316
                     /locus_tag="VF991_16545"
     CDS             2..316
                     /locus_tag="VF991_16545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEX9558106.1"
                     /translation="MPAATRTVQWEGVVVFKVGGKMFCLIAPPDHSVGRICFKCPPEH
                     YEALSRSEGFRPAPYLARAKWVALDDPKVLTPAETKAYLKRAHAVIAGALPRKKQAEL
                     GL"
     gene            423..992
                     /gene="efp"
                     /locus_tag="VF991_16550"
     CDS             423..992
                     /gene="efp"
                     /locus_tag="VF991_16550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006589820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEX9558107.1"
                     /translation="MKVPVNSIRAGNVIEYNGKLWVAAKVQHISPGKGGAFVAIEAKA
                     LREGNKLQERFRSGETIDRVHIDERDCTFLFKDDNGYTFMDKENFEQLSVGIDVLDEE
                     QARFLQDGMEVVVSLYEGTPVGVELPKTVTLAVTEADAVVRGQTASSSYKPAIVEGGI
                     RVMVPPHIGVGTRLVINTEDGSYMERAKD"
     gene            1075..1923
                     /locus_tag="VF991_16555"
     CDS             1075..1923
                     /locus_tag="VF991_16555"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006726863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEX9558108.1"
                     /translation="MAPGRERSGPPERRSLAPRSATITVMIRAAFAAAKSLKRDFGEV
                     EQLQVSEKGPGDFVSHADIKAERTVRAELARTRPDYGFLGEEGGETKGDGRNRWIVDP
                     LDGTTNFLHGVPHFAISIGLEREGEIIAGIIYQPVSDELFWAEKGNGAFIDTPHARSR
                     RLRVSGRKDPARALVGTGIPHIGKADQAAYHAKLAAVSERTAGVRRWGAGSLDLAFVA
                     AGRYDAFFEFGLQPWDVAAGILLVREAGGVVSDIAGKPYELGGPSLLASNFGLRDSMV
                     EILSNA"
     gene            2038..3186
                     /locus_tag="VF991_16560"
     CDS             2038..3186
                     /locus_tag="VF991_16560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotA"
                     /protein_id="HEX9558109.1"
                     /translation="MSNPLPYLIRMLLFLAAVAGLAYLLHHDLLRVFMNTPILNGVIV
                     GVLVIGIFFVMRQVISLWPEVAWLRRFQHREEGSPALETHSINLLAPLAVMVGERQDH
                     FRLSPTVTRAVLDGIATRLDERRELTRYLIGLLIFLGLLGTFWGLLETIGAVADAIAG
                     LQVASGDAVQMFAKLKESIEGPLKGMSTAFGASLFGLSGSLVLGFLELQASQAQGRFH
                     IELEEWLAGVTRLSSSATIEGEQGVSAYVEALLERTADGLDDLTRTLRRAEEGREATV
                     AASATLVERLAALAEAMRGQQTLLARMAEQSIELRGAINRMSERAPDGDRDELMAHQR
                     AIEAHLARLVEESVRGRTALADELRGEFRMLARTIAAMRAAGHPAGEG"
     gene            3192..4391
                     /locus_tag="VF991_16565"
     CDS             3192..4391
                     /locus_tag="VF991_16565"
                     /inference="COORDINATES: protein motif:HMM:NF006543.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan -binding protein"
                     /protein_id="HEX9558110.1"
                     /translation="MAAISSRRRGGAADYTWPGYVDALTTLLMVLIFLLTLFSVGQFT
                     LSSALTTRDSAIDRLGKQVGDLASQLSIEKKATQSLQKDLEQLTLQLRQERSERDRLS
                     SDLAAERKSSDALKVERDQLTERLTSMMGEREKLAAALQGHAKESEAKAADLQKEIER
                     QRLELTRLAASLAVANQEKGRLFGDLTEQEKLTAEQKAAVVRLTAELAGVKDELGRLN
                     AALDAADAKAKEQNAQIVDLGQKLNRALASKVEELARYRSEFFGKLREALSGQRDVQI
                     VGDRFVFQSEVLFPSGSAQLQPGGEKQLASVAQRLIDIASRIPKDINWVLQVDGHTDD
                     KPINNVIYPSNWELSAARAIAVVKFLHSQGIANERLVAAGYGEYQPLSTIDSARNRRI
                     ELKLTNR"
BASE COUNT          761 a         1547 c         1489 g          689 t
ORIGIN      
        1 gctgccggcc gcgacacgga ccgtgcaatg ggaaggcgtg gtcgtcttca aggtcggcgg
       61 caagatgttc tgcctgatcg cgccgcccga tcattcggtc ggccgtatct gcttcaagtg
      121 tccgccggaa cattatgagg cgctgtcgcg ttccgaaggg ttccgtccgg cgccctacct
      181 cgcccgcgcc aagtgggtgg cgctcgacga tccgaaggtc ctgacgcctg ccgagaccaa
      241 ggcctacctc aagcgcgcgc acgcggtgat cgccggcgcc ctgccccgga aaaagcaggc
      301 cgaactgggg ctttgagggc gctgttgcgg ccctccgctg cctttgatag aaggccgcgc
      361 cggcctcgtc gcgctcccgc ggacgaggcc gaattccatt catttgaccg agcggtaagc
      421 ccatgaaagt gcccgtcaat tccatccgtg ccggcaacgt catcgaatac aacggcaagc
      481 tctgggtggc cgccaaggtg cagcacatca gcccgggcaa gggtggcgcc ttcgtggcga
      541 tcgaggccaa ggcgctgcgc gaaggcaaca agctgcagga gcgcttccgt tccggcgaga
      601 cgatcgaccg ggtccatatc gacgaacgcg actgcacctt cctgttcaag gacgacaacg
      661 gctacacctt catggacaag gaaaacttcg agcaactctc tgtcgggatc gacgtgctcg
      721 acgaagagca ggcccgcttc ctgcaggacg gcatggaagt cgtggtgtcg ctttacgaag
      781 gcacgcccgt gggcgtcgag ctgcccaaga ccgtgacgct cgccgtcacc gaggccgatg
      841 ccgtggtgag gggccagacc gcgtcttcgt cctacaagcc cgccatcgtc gaaggcggca
      901 tccgcgtgat ggtgccgccg catatcggcg tcggcacgcg gctggtgatc aacaccgagg
      961 atggcagcta catggaacgc gcaaaggact gatcgcaccg tggccgtccc caccgatcgt
     1021 cgccccaacc accgcacgag tgatcggccg gtcgcgcgcg tcggacgcgc ccccatggcg
     1081 cccggccgcg agcgttccgg gccgcccgaa cgccgctcgc tggcgccgcg ctcggccacc
     1141 atcacggtga tgatccgcgc cgctttcgcc gccgccaaaa gcctcaagcg cgacttcggc
     1201 gaggtcgagc agctccaggt ctccgaaaag ggaccgggcg acttcgtcag ccacgccgac
     1261 atcaaggccg agcgcaccgt gcgcgccgag ctcgcccgca cgcggccgga ctacggtttc
     1321 ctcggcgagg aaggcggcga gaccaagggc gacggccgca accgctggat cgtcgatccg
     1381 ctcgacggca ccaccaactt cctgcacggc gtgccgcatt tcgccatctc gatcggcctg
     1441 gagcgcgaag gcgagatcat cgccggcatc atctatcaac cggtctccga cgagctgttc
     1501 tgggccgaga agggcaacgg cgccttcatc gacacgcctc acgcccgctc gcgccggctg
     1561 cgcgtgtcgg gccgcaagga tccggcgcgc gccctggtcg gcaccggcat cccgcatatc
     1621 ggcaaggccg accaggcggc ctaccacgcc aagcttgccg ccgtcagcga acgcaccgcg
     1681 ggcgtgcggc gctggggcgc cggctcgctc gatctcgcct tcgtggcggc cggccgttac
     1741 gacgcgttct tcgagttcgg gctgcagccg tgggatgtcg ctgccggcat cctgctggtg
     1801 cgcgaggccg gcggcgtggt gagcgacatc gccggcaagc cctacgagct gggcggcccc
     1861 tcgctgctgg ccagcaattt cggcctgcgc gattcgatgg tcgagatttt gtccaacgcc
     1921 taaaagacca cgcgcggttg agggagggtc tgccattggc tattgtcgaa cggcaaatcc
     1981 catcgaaggg caaccggtta tgccaacgtc ttcggtcgct gcacgcagcc tgaccggatg
     2041 agcaatccgc tcccctacct cattcgcatg ctgctgttcc tggcggccgt ggcgggcctg
     2101 gcctacctgc tgcaccatga cctgctgcgc gtgttcatga acacgccgat cctgaacggc
     2161 gtgatcgtgg gcgtgctggt gatcggcatc ttcttcgtca tgcgccaggt gatctcgctg
     2221 tggcccgaag tggcgtggct gcgccgcttc cagcaccgcg aggagggcag cccggcgctc
     2281 gagacgcact ccatcaacct gctggcgccg ctcgccgtca tggtcggcga acgccaggac
     2341 catttccgcc tgtcgcccac ggtcacgcgc gcggtgctcg acggcatcgc cacccgcctc
     2401 gacgagcgcc gcgagctgac gcgctacctg atcgggctgc tgatcttctt gggcctgctc
     2461 ggcaccttct ggggcctgct ggagaccatc ggcgccgtcg ccgacgccat cgccgggctg
     2521 caagtggcga gcggcgatgc cgttcagatg ttcgccaagc tcaaggaaag catcgaaggg
     2581 ccgctcaagg gcatgtcgac ggcgttcggc gcctcgctgt tcggcctgtc gggatcgctg
     2641 gtgctgggct tcctcgaact gcaggcgagc caagcccagg gccgcttcca tatcgagctc
     2701 gaggaatggc tggccggcgt cacccgcctg tcgagcagcg ccaccatcga gggcgagcag
     2761 ggcgtgtcgg cctatgtcga agccctgctc gagcgcaccg ccgacggcct cgacgacctg
     2821 acgcgcacct tgcggcgcgc cgaggaaggc cgcgaagcca cggtcgccgc cagcgccact
     2881 ctggtcgagc gcctggctgc gctcgctgag gcgatgcgcg ggcagcagac tttgctggcc
     2941 cgcatggccg agcagtcgat cgagctgcgc ggggcgatca atcgcatgag cgagcgcgcg
     3001 ccggacggcg atcgcgacga gctgatggcg caccagcgcg ccatcgaagc ccacctcgcc
     3061 cgcctggtcg aggagagtgt gcgcggccgc accgcgctcg ccgacgagct gcgcggcgag
     3121 ttcaggatgc tggcccgcac catcgccgcg atgcgcgccg ccggccatcc ggccggcgag
     3181 ggctaggacc gatggccgcc atttcttccc gccgccgcgg tggcgccgcc gactatacct
     3241 ggccgggtta cgtcgacgcg ctcacgacgc tgttgatggt gttgatcttc ctgctgaccc
     3301 tgttcagcgt cggccagttc acgctgtcga gcgcgctcac gacgcgcgac agcgccatcg
     3361 accggctggg caagcaggtc ggcgatctcg ccagccagct gtcgatcgag aagaaggcga
     3421 cgcaaagcct gcagaaggac ctcgagcagc tcaccctgca gcttcgtcag gagcgcagcg
     3481 agcgcgaccg gctgagctcc gatcttgctg ccgagcgcaa atcgtccgat gcgctcaagg
     3541 tcgagcgcga ccagctcacc gaacgcctga cctcgatgat gggcgagcgc gaaaaactgg
     3601 cggcggcgct gcagggccac gccaaggaat cagaggccaa ggccgccgac ctgcagaagg
     3661 agatcgagcg ccagcgcctg gaactcacgc ggcttgccgc gtcgctcgcc gtcgccaacc
     3721 aggagaaagg caggctgttc ggcgatctca ccgagcagga gaagctgacg gccgagcaga
     3781 aggccgcggt ggtgcgcctc accgccgagc tggccggcgt gaaggacgag ctgggccgcc
     3841 tcaacgccgc gctcgatgcc gccgacgcca aggccaagga gcagaacgcc cagatcgtcg
     3901 atctcggcca aaagctcaac cgcgcgctcg ccagcaaggt cgaggagctg gcgcgctatc
     3961 gctcggaatt cttcggcaag ttgcgcgagg ccctgtccgg ccagcgcgac gtgcagatcg
     4021 tcggcgaccg cttcgtcttc cagtccgagg tgctgtttcc gtcgggttcg gcgcagctgc
     4081 agcccggcgg cgagaagcag ctcgcgagcg tggcccagcg gctgatcgac atcgcctcgc
     4141 gcatccccaa ggacatcaac tgggtgctgc aagtcgacgg ccataccgac gacaagccga
     4201 tcaacaacgt gatctatccg tcgaactggg agctgtcagc ggcgcgcgcc atcgccgtgg
     4261 tgaaattcct gcacagccag ggcattgcca acgagcgcct ggtcgccgcg ggctacggcg
     4321 agtaccagcc actgtcgacc atcgacagcg cccgcaaccg gcgcatcgag ctgaagctga
     4381 ccaaccggtg agcgctcggt gtcatcccga gcgcagcgag ggtgtggatt cacatttgaa
     4441 gtgcaacagt tgggcaagga acgcttcagc cggggaccta aatccg
//
LOCUS       DASWGA010000710         3293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1224412, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000710 DASWGA010000000
VERSION     DASWGA010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1224412"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VF991_16570"
     CDS             <1..453
                     /locus_tag="VF991_16570"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9558111.1"
                     /translation="IGGGCQILLATDFNIAGREAYLTLPARKEGIIPAMANLRLARFV
                     GDRIARQAIMYERRIECDSEVGRMICDEVIDPAAMDQTIASVIDRLTGSGAVGAIGNR
                     RALRLAAEPLDMFRRYAAFYAREQAYCHFSPALIANLELYWNAPNRRA"
     gene            complement(463..1116)
                     /locus_tag="VF991_16575"
     CDS             complement(463..1116)
                     /locus_tag="VF991_16575"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558112.1"
                     /translation="MSAVLEIGELSVGAGEIVAVLGGNGAGKTGLLETILGFRSGRVS
                     LFSRDVTSLAVEQRVLSGLGYVPEGRRVFAALTVRENLEAACALPADQRRQRVGEMLA
                     LFPMLAERPQARAWLLSGGQQQMLALARALMNKPRLLLLDEPTLGLAPVVVADLLRRL
                     SAMTADGTAIVLAEQRAALALGVASRGVVLSRGRVVRHGTAADLAADPTLADLMAGG"
     gene            complement(1113..2645)
                     /locus_tag="VF991_16580"
     CDS             complement(1113..2645)
                     /locus_tag="VF991_16580"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9558113.1"
                     /translation="MRALGAFWFAVLLLPPIVALAVLEPFGQRMVALVGIYALMGLGY
                     QLVFGQLGALNLAQGALFGLGAYAAALTAPALGGLALAVAILAAAIPAAIVAAATLRL
                     QSHYFALATLALASIANLLAVHGEGLTGGANGLAGFTASLPRGSRLLAMVWICLIAGV
                     LLYAHLFRGGLGEKARLLRQAPLVAATLGVDGGRWRLAAFVVGGGLAGLAGAFSAAVS
                     GVVSPEATGFSIMVLCLTSVVLGGARHPMGAVLGAAIAVCLPELLRDLQGAWLLAYAV
                     ATLAVVRWAPEGLAGLLDGLRGAGVEEPSTPVLPETLPPIAGAQRLTIESVVKRFGGV
                     EALAGVSFTVERGEIVGLIGPNGSGKTTLLNAISGLDPADAGTIGLDDRPIERLAAHL
                     IARAGVGRTFQTPMLEGDTHRIELARAVSTGAAFLLLDEPAAGATDLEREQLALLLRR
                     LRESGRAILIVDHDIELLTRICDRLVCLDRGRVIAAGRPAEVRADARVRASFLGLAEA
                     AP"
     gene            complement(2647..>3293)
                     /locus_tag="VF991_16585"
     CDS             complement(2647..>3293)
                     /locus_tag="VF991_16585"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9558114.1"
                     /translation="VAARVAILPLAARPPEATFVATIALAAIVEQGLTVTMGAAPRTA
                     PSLLGSGSFDVAGLVLGRQPFAIVVVGAALVAAVWFLLERTQTGRRMRAVSSDRHMAR
                     AVGIPVSRYIILSLALAGALAGVAGLLLGHQFLVAPTQGAGHMLKAYIAVALGGWGSV
                     PGALLAALGIGAFETFISAGFGDAWASAALYISVLVVLAVRPRGLFGEPLGRRA"
BASE COUNT          571 a         1193 c         1155 g          374 t
ORIGIN      
        1 atcggcggcg gctgccagat ccttttggcg accgacttca acatcgccgg acgcgaggcc
       61 tatctcaccc tgccggcgcg caaggagggc atcatcccgg cgatggccaa tctgcgtctg
      121 gcccgcttcg tcggcgatcg catcgcccgc caggcgatca tgtacgagcg ccgcatcgaa
      181 tgcgattccg aggtcggccg catgatctgc gacgaggtca tcgatccggc cgccatggac
      241 cagacgatcg cgagcgtcat cgaccggctg accggctcgg gcgcggtggg cgcgatcggc
      301 aaccgccgcg ccttgcggct ggctgccgag ccgctcgaca tgttccgccg ctacgccgcg
      361 ttctatgccc gcgagcaggc ctattgccat ttcagcccgg cgctgattgc caacctcgag
      421 ctttactgga acgccccgaa ccggcgtgcc taggtctcgg tgtcatccgc ccgccatcaa
      481 gtcggcgagc gtgggatcgg cggcgaggtc ggcggcggtg ccgtggcgca ccacccggcc
      541 gcggctcagc accacgccgc ggctcgccac gccgagcgcc agggcggcac gctgttcggc
      601 cagcacgatc gcggtgccgt ccgctgtcat cgccgacagc cgacgcagga ggtcggccac
      661 gacgaccggc gccaaaccga gggtcggctc gtcgagcagc agcaggcgcg gcttgttcat
      721 gagggcgcgc gccagcgcca gcatctgctg ctggccgccc gacagcagcc aggcgcgcgc
      781 ctgcgggcgc tcggcgagca tggggaacag cgccagcatc tcgccgacgc gttgccgccg
      841 ctggtcggcc ggcagcgcgc acgccgcttc gaggttttcg cgcaccgtga gggctgcgaa
      901 gacacggcgt ccttccggca cgtagcccag gcccgacagc acgcgctgct cgacggcaag
      961 cgacgtgacg tcccggctga acaggctgac gcgaccggaa cggaaaccga ggatggtttc
     1021 aagcaagccg gtcttgccgg cgccgttgcc gcccagcacg gccacgatct cgccggcgcc
     1081 gaccgagagc tcgccgatct cgagcacggc gctcatggcg ctgcctcggc gagtccgagg
     1141 aaactcgcgc gcacgcgggc gtcggcgcgg acctccgcag gacggccggc ggcaatgacc
     1201 ctgccgcggt cgaggcagac caggcggtcg caaatgcgcg tcagcagctc gatgtcgtga
     1261 tcgacgatca ggatggcgcg acccgactcg cgcagacggc gcagcagcag ggcgagctgc
     1321 tcgcgctcga gatcggtggc gccggccgcc ggttcatcga gcagcaggaa cgccgccccg
     1381 gtcgagacgg cgcgcgccag ctcgatccga tgtgtgtcac cctccagcat cggcgtctgg
     1441 aaggtgcggc cgacgccggc gcgcgcgata aggtgcgccg ccagccgctc gataggccgg
     1501 tcgtcgagcc cgatcgttcc tgcgtccgcc gggtcgagac cggaaatcgc gttcaggagc
     1561 gtggtcttgc ccgacccgtt ggggccgatc aggcccacga tttcgccgcg ctcgaccgtg
     1621 aaggacacgc cggccaatgc ctcgacaccg ccgaagcgtt tgacgacgct ttcgatcgtc
     1681 aggcgttgcg cgcccgcgat cggcggcagc gtctcgggca agacaggcgt cgacggctcc
     1741 tcgaccccgg cgccgcgcag accatccaaa agacccgcca ggccttcggg cgcccaccgc
     1801 accacggcga gcgttgccac ggcataggcg agcagccacg cgccctgcag gtcgcgcagc
     1861 aactcgggca ggcagacggc gattgccgcg cccagcaccg cgcccatggg atggcgcgcg
     1921 ccgcccagca ccaccgaggt caggcagagc accatgatgg aaaatccggt cgcctcgggc
     1981 gagacgacac cgctcacggc ggcggaaaac gcccccgcca atccggccag tccgccgccc
     2041 accacgaaag cggcgagccg ccaacgtccg ccgtcgacgc cgagcgtggc ggctaccagc
     2101 ggcgcctggc gcaagaggcg cgccttctcg ccgaggccgc cgcgaaaaag atgcgcgtaa
     2161 agcaggacgc cggcgatcag gcagatccag accatcgcca gcaagcggga gccgcgcggc
     2221 agcgatgccg tgaagcccgc cagcccgttg gcgccgccgg tcagtccttc gccatggacg
     2281 gccaaaaggt tggcgatgga agcgagcgcc agggtggcga gagcgaaata atgcgactga
     2341 aggcgcagcg tcgcggcggc cacgatcgcc gcgggaatcg ccgccgcgag gatcgcgacg
     2401 gccaacgcca gcccgccgag cgcgggcgcc gttagagcgg ccgcgtaggc gccgagaccg
     2461 aacagggcac cttgcgccag gttgagcgcc ccgagctgac cgaacacgag ctggtagccc
     2521 aggcccatca gggcatagat gccgaccagc gccaccatgc gttggccgaa cggttcgagc
     2581 acggccagcg ccacgatcgg cggcagcagc aggacggcga accagaaagc gcccagtgcg
     2641 cgcatgtcag gcgcgcctgc ccagcggctc gccaaacaag ccccgcggcc gcaccgccag
     2701 gaccaccagc acgctgatat agagagcagc cgatgcccag gcatcgccga agccagccga
     2761 tatgaaggtc tcgaaagcgc cgatgcccag cgccgccaaa agcgcgccgg gcacgctgcc
     2821 ccagccgccc agcgccaccg cgatataagc cttcagcatg tgaccggcgc cctgggtcgg
     2881 cgcgaccagg aattgatgcc ccaacaacag gccggcgacg cccgccagcg cgccggcgag
     2941 tgccagcgag aggatgatat agcggctgac cggaatgccg acggcgcgcg ccatgtggcg
     3001 gtcggacgac accgcgcgca tgcgccgccc ggtctgggtg cgctcgagca ggaaccagac
     3061 cgcagcgacc agcgccgcac cgaccacgac gatggcgaac ggctggcggc cgagcacgag
     3121 gcccgcgacg tcgaacgagc cgctgccaag cagcgaaggc gcggtgcgcg gcgcggcgcc
     3181 catcgtgacg gtgaggccct gctcgacgat ggcggcaagc gcgatggtgg cgacgaaggt
     3241 ggcttcgggt ggccgcgcgg cgagcggcag gatggcgacg cgcgccgcga cga
//
LOCUS       DASWGA010000711         2966 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_81007, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000711 DASWGA010000000
VERSION     DASWGA010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81007"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1898)
                     /locus_tag="VF991_16590"
     CDS             complement(<1..1898)
                     /locus_tag="VF991_16590"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9558115.1"
                     /translation="MVTCTGSFWSSSSASSTSGRESVGIQHRRRSEIAHAGLGDLAIA
                     RIAGVSCQQGEEARSGHVVLALHDRLGQVLGVRRGRGEKAAGFGVDEGPADEIAGGGG
                     GSEPLALARRAVQRQQGRAHLDIVGEVGSAGIARGVTEAAAEQAALAQRPLRAGHGER
                     QCALLARCVVVGEQSLDGLAGLAGVLALVDAGLAFGHAHRGVEAAIRSGERVLEEAED
                     SVGGRAVGRLVEQHRGAGVGRQRCLLGEHRIFARGCRPVGFQRDLTDAAKRRVDQGDL
                     RREAALEPCLGLLVSRLRPVEEPAEGRAVHELALAPAAVVAVVGLVEESQDLGALGVA
                     QARRQGALPLRTGGVTVIDRRGIADRLLQDGNEEFRRVEAAQLHDLRAVRPEDDGGGP
                     APALVALGDVGAAVLVDVDRNELVPERGAHLGVGPGIAVHDVAPRAPPALQRHDHELL
                     LGGGAPEGGVRPVAPEAVLVVERRGLSRRQTQQQCRDDTQEPHHESLRCHHASKPFAG
                     SAVQWSNHGQTQDREEPQEEPVAITVQPITPTFAAEVGDVTLGKPLAPDDLAAIRAAF
                     TKYAVLVFPDQEFDDESQLAFARHFGPLETTVFKARKDHKLRLHENLADVGNLDAENR
                     ILPTDDRQR"
     gene            1885..2151
                     /locus_tag="VF991_16595"
     CDS             1885..2151
                     /locus_tag="VF991_16595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558116.1"
                     /translation="MHVTIVGPKDDPRSATLHAAALRYPLAYKRAEWWDKREGKLVHH
                     DVDYPDYPDGPAAFACTRNFCSLPVTDPAAIPAQLDRLQRAVSK"
     gene            2170..2820
                     /locus_tag="VF991_16600"
     CDS             2170..2820
                     /locus_tag="VF991_16600"
                     /inference="COORDINATES: protein motif:HMM:TIGR02466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02466 family protein"
                     /protein_id="HEX9558117.1"
                     /translation="MIEKQEVQEIFPTPLWVVDLQPAAAATLNAKLKAEIERLIAPRP
                     KVPAGSNWQTPQDLHTKPAFAEFVKLVETAARGVARFLQIDQYPMDITGCWANVNPPG
                     SYHPMHHHPNNYLSGVYYVAVPSVGSQIIFQDPRGQASMIMPKPRQYTRLTANGANAQ
                     SKEGRLLIFPAWLKHTVPPNEGQSERISISFNLMFRNFSETMAAPLWDATAGKEKS"
BASE COUNT          521 a         1011 c          953 g          481 t
ORIGIN      
        1 cgctggcggt cgtcggtcgg caggatacgg ttctcggcgt cgagattgcc gacatcggcc
       61 aggttctcgt gcaggcgcag cttgtggtcc ttgcgcgcct tgaacaccgt ggtctcgagc
      121 ggcccgaaat ggcgggcgaa ggcgagctgg ctttcgtcgt cgaactcctg gtcgggaaag
      181 accagcacgg catatttggt gaaggcggcg cgaatcgcgg cgaggtcatc cggcgcgagc
      241 ggcttgccga gcgtgacatc gcccacttca gcggcgaaag tcggggtgat cggctggacg
      301 gtgatggcca cgggttcctc ctggggttcc tcccgatcct gtgtttggcc gtgattggac
      361 cactgaacgg cgcttcctgc aaatggcttg gaagcatggt ggcaacggag actttcatga
      421 tgcggttcct gggtgtcgtc gcggcattgt tgctgggtct ggcggcggct gaggccgcgc
      481 cgctcgacaa caaggacggc ttctggagcg actggtcgga cgccaccttc gggcgcgccg
      541 ccaccgagaa gaagttcgtg atcgtgtcgc tgcaaagctg gtggtgcccg tggtgccacg
      601 tcatgaaccg cgatacctgg gccgacgccg aggtgcgcgc cgcgctcagg gacaagttca
      661 ttccggtcta cgtcgaccag gacagccgcc ccgacatctc ccagcgctac gagcgctggg
      721 gctggcccgc caccatcatc ttcgggccgg acggcacgga gatcgtgaag ctgcgcggct
      781 tctactcgcc gaaattcttc attcccgtcc tgcaggagac gatccgcgat ccctcgccgg
      841 tcgattacgg taacgccgcc ggtccgcagc gggagcgcac cttggcgacg ggcttgagcg
      901 acgccgagcg caccgagatc ctggctttcc tcgacaaggc ctacgaccgc gacaacggcg
      961 gctggagcaa gagcaagctc gtggacggcc cgaccctcgg ctggttcctc gaccgggcga
     1021 aggcgggaga caaggaggcc gaggcacggc tcaagcgcag cctcacggcg cagatcgccc
     1081 tgatcgaccc ggcgcttggc ggcatcagtc aggtctcgct gaaagccgac tggtcggcac
     1141 cctcgcgcga atatccgatg ttcgcccaac aggcagcgct gtcggcctac gcccgcgccg
     1201 cggtgctgtt cgacgagccg gcctaccgca cggccgccga ccgaatcttc ggcttcctca
     1261 agaacacgct cgccgctccg gatggcggct tctacgcctc gatgggcatg gccgaaggcg
     1321 agcccggcgt cgacaagcgc cagtacgccc gcgagaccgg ccaggccatc cagggactgc
     1381 tcgcctacta cgacgcaacg ggcgagaaga gcgcattgtc gctcgccgtg gccggcgcgg
     1441 agtgggcgct gcgcgagcgc agcctgctcg gcggcggctt ccgtcacgcc gcgcgcgata
     1501 ccggcggacc ctacctcgcc gacaatgtcg agatgggcgc ggccttgctg gcgctgcacc
     1561 gctcgacggg cgagcgcaag tggctcgctg ccgcctccgc cgccggcgat ttcatcggca
     1621 ggaccttcat cgaccccaaa accggcggct ttttcgcctc ggcctcgcct gacgccaagc
     1681 acctgcccaa gccgatcatg cagcgcgagg acaacgtgac cgctacgcgc ttcttcaccc
     1741 tgctggcagc ttacaccggc aatgcgcgcg atcgcgagat cgccgaggcc ggcatgggct
     1801 atctcgcttc gccggcggtg ctggatgcct acgctttccc tgcccgatgt gctgctggcc
     1861 gaggaggaac tccagaacga gccggtgcac gtcaccatcg tcggacccaa ggacgatccg
     1921 cgcagcgcca cgctccatgc cgccgcgctg cgctatcccc tggcctacaa gcgcgccgaa
     1981 tggtgggaca agcgcgaagg aaagctcgtc catcacgacg tcgactatcc cgactatccc
     2041 gacggcccgg cggccttcgc ctgcacgcgc aatttctgct cgttgcccgt aaccgaccct
     2101 gcggcaattc ccgcccagct cgaccgcctg cagcgcgctg tcagcaagtg aattccgcta
     2161 tactggagca tgatcgaaaa gcaggaagtc caggaaatct tccccacgcc gctctgggtc
     2221 gtggaccttc agcccgctgc ggcagcgacg ctcaacgcca agctcaaggc cgagatcgaa
     2281 cggctgatcg cgccccggcc caaagtcccc gccggcagca actggcagac gccgcaggac
     2341 ctgcacacca agccggcttt tgccgagttc gtgaagctgg tcgagacggc ggcccgcggc
     2401 gtcgcccgct tcctgcaaat cgaccagtat ccgatggaca tcaccggctg ctgggccaac
     2461 gtcaatccgc cgggcagcta tcacccgatg caccaccatc ccaacaatta cctgagcggt
     2521 gtctattacg tcgccgtgcc ctccgtcggc tcgcagatca tcttccagga tccgcgcgga
     2581 caggcctcga tgatcatgcc caagccgcgc cagtacacca ggctcaccgc caacggcgcc
     2641 aatgcgcaaa gcaaggaagg aaggctgctg atcttcccgg cgtggctgaa gcacaccgtg
     2701 ccgcccaacg aaggccagag cgagcgcatc agcatctcgt tcaacctcat gttcaggaat
     2761 ttcagcgaga ccatggccgc gccgctgtgg gacgcgacgg cgggcaagga gaagagttga
     2821 tcacgcgcgc tgtcatcccg ggcgcagcga gggaccttta gggcgacacg aaaggtccct
     2881 cggccttcgg cctcgggatg acagggtgcg tggatgacga agggcctgtc atccccagcg
     2941 aagcgggggt gtggattcac atttga
//
LOCUS       DASWGA010000712         5993 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1609718, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000712 DASWGA010000000
VERSION     DASWGA010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5993
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1609718"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..1152
                     /locus_tag="VF991_16605"
     CDS             190..1152
                     /locus_tag="VF991_16605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HEX9558118.1"
                     /translation="MPIARTTDSDKARLDDAARAGWLYFIAGHTQDEIAKRLKVSRAT
                     AQRLVSLCLSERLITFRLEHPIAACMDLAKRLIDKFELRICEVAPTVPASPTAVVGVA
                     ERAASFLEATLRSDKPTIVAIGTGRAMRAAVEQVQPMDCPDHQLVSLVGNISTDGSAT
                     FFDTVARLADLTKARHYPMPLPVLMSSEREREQVLKMGPITKVRAIAAKADLRLLGVG
                     QMDKNAQFHVDGFISRDELLELMRLGAVGELTGWAYDADGRFIKGGTNKRLTSVPHPA
                     PAAALTVAAALGPAKVPAILAALKGRLINGLITDEATAQALLSR"
     gene            1352..2560
                     /locus_tag="VF991_16610"
     CDS             1352..2560
                     /locus_tag="VF991_16610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015916982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEX9558119.1"
                     /translation="MIRMQGLTNQFTAKNPGINVKWVTLEENVLRQRVTTDIATKGGQ
                     FDVLTIGTYEVPIWAKQNWLVTLDKLPPDYDVADLLPKIRDAVSVGGKVYAAPFYGES
                     SMVMYRTDLFQKAGLTMPESPTWDFVVNAAKKVTDKSAGVYGICLRGKAGWGENMAFL
                     TAMSNSFGARWFDEKWQPQFNGPEWKKTLTTYVDLMKEAGPPGASSNGFNENLALFNA
                     GKCGMWIDATVAASFVTNPKDSRVADKVGFALAPNAGLGKNANWLWAWNLAIPAGSKK
                     VDAAEKFIAWATSKEYTQLVASKEGWANVPPGTRTSLYQNPEYQKAAPFAKMTLASID
                     SADPNHPTVKPVPYVGVQYVAIPEFQGIGTAVGQQFSAALAGTTTVDAALTAAQASTE
                     REMKRAGYIK"
     gene            2557..3426
                     /locus_tag="VF991_16615"
     CDS             2557..3426
                     /locus_tag="VF991_16615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9558120.1"
                     /translation="MTEQTRALGRLLLTPAVALLFVWMIVPLAMTIYFSSLRYNLLNP
                     GMEQFVGLENYTYFLTDPAFLASLHNTLVLVGSVLAITIVLGTLIALLLDQVVVGRSI
                     VRLMVIAPFFVMPTVSALVWKNLLMHPVSGLLAFIATSLGLAPIDWFADMPLLAIILI
                     VAWQWLPFATLILLTALQSLDEEQREAAEMDGASALSSFIYVTLPHLARPITVVILIE
                     TIFLLTVFAEIFVTTGGGPGLATTNIAFLIYAQALIQYDVGSASAGGMVAVVIANIVA
                     FFLVRIVGRNLEA"
     gene            3432..4262
                     /locus_tag="VF991_16620"
     CDS             3432..4262
                     /locus_tag="VF991_16620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014329271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9558121.1"
                     /translation="MARRVTPARIAVSTVAAWVVGFVIFFPILWMVLASFKTELEAFS
                     IPPSFLFFDWTLENYETVQGRSDYIHHAVNSIVVAGGSTLIAMLIAIPAAWSMAFAPS
                     KRTKDTLLWMLSTKMMPPVGVLVPIYLLYRTFGLLDTLGGLILVLCLGNLPIVVWMLF
                     TYFKEIPKDILEAARMDGATVGRELVYVLTPMAVPGIASTLLLNVILAWNEAFWTLNL
                     STSDAAPLTVFIASYSSPEGLFWAKLSAASTLAIAPILVLGWFSQRQLVRGLTFGAVK
                     "
     gene            4271..5290
                     /locus_tag="VF991_16625"
     CDS             4271..5290
                     /locus_tag="VF991_16625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558122.1"
                     /translation="MGRITLEGVRKSFGAHAVIHGADLEIEDGSFVVFVGPSGCGKTT
                     LLRLIAGLEDVSEGRILIDGANVVDVPAAKRGLSMVFQSYALYPHMSVRGNIGFGLKM
                     AGLPRTEISRKVEAAAATLNLTPYLERKPRELSGGQRQRVAIGRAIVREPKAFLFDEP
                     LSNLDAALRVQMRLEVTKLQRQLATTAVYVTHDQVEAMTMADRIVVLNAGRIEQYGSP
                     LELYDRPANLFVAGFIGSPRMNFIGKETAQRHGADTIGIRPEHLKASRDGEGWEGQVS
                     VAEHLGSDTFLHVEVPEIGSLTARSIGELGLTTGDRVRLLPDPGRIHRFDRDGKAMST
                     RPPSC"
     gene            5376..>5993
                     /locus_tag="VF991_16630"
     CDS             5376..>5993
                     /locus_tag="VF991_16630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9558123.1"
                     /translation="MYLDMFKLTGRTALVTGAGRGIGLACAEALAEAGARVIIADRDT
                     ALAEEGRAALRAKHADAETVIMDVTDSGRVTEVADELASRHGKIDILVNNAGIARSET
                     PAEKVTDEHWLNVLDVNLNGTFWCCRAFGKHMLRAKSGAIVNIGSMSGFIVNKPQAQS
                     YYNASKAAVHHLTKSLAAEWGSRGVRVNAVAPTYIATPLNEFVKSN"
BASE COUNT         1070 a         2051 c         1815 g         1057 t
ORIGIN      
        1 cggagcctgc gccctcgcgc ctagcgggcc ggcagcgaac agaccgccgg caagaagcga
       61 gaacgctcgc cgcctcattt gatcgacatc agcccccgag cgcactcccg gaacgcactt
      121 cactattttg cgcagtagaa aacccgagat caattgtcgt ttccttgaaa acgggaaata
      181 gtcgccgata tgcccattgc acggacaacc gatagcgaca aggcgcgcct cgacgatgcg
      241 gcgcgcgccg gctggcttta cttcatcgcc ggtcatacgc aggacgagat tgccaaacgg
      301 ctaaaagtgt cgcgagcgac cgcccagcgc ctggtctcgc tctgtctgtc cgaacggttg
      361 atcacctttc ggctggaaca tcccattgcc gcgtgcatgg atctggccaa gcggctgatc
      421 gacaaattcg agctgcgcat ctgcgaagtc gcgccgacgg ttccggcgtc gcccacggcc
      481 gtcgtcggcg tggccgagcg cgccgccagt tttctcgaag cgacgctgcg aagcgacaag
      541 ccgaccatcg tggcgatcgg caccggccgg gccatgcggg cggccgtcga acaggtgcag
      601 cccatggatt gccccgatca ccagcttgtg tcgctggtcg gcaacatatc gaccgacggt
      661 tcggccactt ttttcgacac ggtcgcgcgt ctcgccgacc tcaccaaggc ccgacactat
      721 ccgatgcctc tgcctgttct gatgtcgtcc gaacgcgaac gcgagcaggt gctgaagatg
      781 ggcccgatca cgaaagtccg tgccattgcc gccaaggcgg atttgcgcct tctgggcgtg
      841 ggccagatgg acaaaaacgc gcagttccac gtcgacggct tcatcagccg cgacgagctc
      901 ctggagctga tgcggctggg cgccgtcggc gaactgaccg gttgggccta tgacgccgat
      961 ggccgtttca tcaagggcgg caccaacaag cgcctcacca gcgttcccca ccccgcaccg
     1021 gccgccgccc tgaccgtcgc cgccgccctc ggacccgcga aagtgccggc aatccttgcc
     1081 gccttgaagg gacggctgat caacggcctg atcaccgacg aggcgactgc acaggccctg
     1141 ctgtcgcgct gatattcatc ggcggcgctt gacaagccga aatgccggcg tgagcatatg
     1201 atcaaggcgt gggcatatgc ccaacgcgca gccttgggag gaatctgtga agcaccgcat
     1261 cagcgccttt gcaggcgtcc tgtcagtcct cgtcgccgtc ccggttttcg cccagaccac
     1321 cttgaccatc gccacggtca acaacggcga catgatccgc atgcagggcc tgaccaacca
     1381 gttcacggcc aagaatccgg ggatcaacgt caaatgggtc acgctggaag agaacgtgct
     1441 gcgccagcgg gtcacgacgg atatcgccac caagggtggc cagttcgacg tgctgacgat
     1501 cggcacctac gaggttccga tctgggccaa gcagaactgg cttgtcaccc tcgacaagct
     1561 cccccctgac tacgacgttg ccgatcttct gcccaagata cgcgacgcgg tctcggtggg
     1621 aggcaaggtc tacgccgcgc ccttctacgg cgagagttcg atggtcatgt accggaccga
     1681 cctgttccag aaggccggtc ttacgatgcc ggagtcgccg acatgggatt tcgtcgtcaa
     1741 cgccgccaaa aaggtcaccg acaaatcggc cggcgtctat ggcatctgcc tgcgcggcaa
     1801 ggccggctgg ggcgagaaca tggccttcct caccgccatg tccaactcgt tcggcgcgcg
     1861 ctggttcgac gagaagtggc aaccgcagtt caacggcccc gaatggaaga agacgctcac
     1921 gacctatgtc gacctgatga aggaggccgg tcccccgggt gcgagctcca acggcttcaa
     1981 cgagaacctc gctctgttca acgccggcaa atgcggcatg tggatcgacg ccacggtcgc
     2041 ggcgtccttc gtcaccaatc ccaaggattc gagggtcgcc gacaaggtgg gcttcgcgct
     2101 cgcgccaaac gccggcctcg gcaagaacgc caactggctg tgggcctgga accttgccat
     2161 cccggccggc tccaagaagg tcgatgcggc cgagaagttc atcgcttggg caaccagcaa
     2221 ggaatacacc cagctcgtcg cctccaagga aggctgggcc aacgttcctc caggtacgcg
     2281 cacctcgctc taccagaatc cggaatatca gaaggccgcg ccgttcgcga agatgaccct
     2341 ggcgtcgatc gactcggccg accccaacca tccgacggtc aagcccgttc cttacgtcgg
     2401 cgtgcaatac gtcgccatcc cggaattcca gggtatcggc accgcggtcg gccagcaatt
     2461 ctcggcggct ctcgccggca cgaccaccgt cgacgccgcg ctgaccgccg cccaagcgtc
     2521 gaccgagcgg gagatgaagc gggcaggcta tatcaagtga ccgaacagac gcgggcgctc
     2581 ggccggctgc tgctgacgcc ggccgtcgcc ctgctgttcg tctggatgat cgtcccgctc
     2641 gcgatgacca tctatttctc gagcctgcgc tacaacctgc tcaatcccgg gatggagcaa
     2701 ttcgtcggtc tcgagaacta cacctacttc ctgaccgacc cggcgttcct cgcctccctg
     2761 cacaacaccc tggtgctggt cggatcggtc ctggcgatca ccatcgtatt gggcacgctg
     2821 atcgccctgc tgctcgacca ggtggtggtc gggcgcagca tcgtgcgcct gatggtcatc
     2881 gcgcccttct tcgtcatgcc cacggtcagc gcgctggtct ggaaaaacct cttgatgcac
     2941 ccggtgtcgg gcttgctcgc cttcatcgcg acgtcgcttg gcctcgcccc catcgactgg
     3001 ttcgccgaca tgccgctttt ggcgatcatc ctgatcgtgg cgtggcagtg gctgccgttc
     3061 gcgacgctga tcctgctcac cgccctgcaa tccctcgacg aggagcagcg ggaagccgcg
     3121 gagatggacg gcgccagcgc attgtcgagc ttcatctatg tcacgctgcc gcacctcgcg
     3181 cgcccgatca ccgtggtcat cctgatcgag accatcttcc tgctcacggt gttcgccgag
     3241 atctttgtca ccaccggcgg cggcccgggc ctggcgacca ccaacatcgc cttcctgatc
     3301 tacgcccagg cgttgatcca atatgacgtc ggctcggcct cggcgggtgg catggtggcg
     3361 gtggtgatcg ccaacatcgt tgcctttttc ctggtccgca tcgtcggccg caacctggag
     3421 gcctgagagc gatggccagg agagtgaccc cggcacggat agcggtatcg acagtcgccg
     3481 cctgggttgt cggcttcgtg atcttctttc ccatcctctg gatggtgctg gcgagcttca
     3541 agaccgagct cgaggcgttc tcgatcccgc cgtcgttcct gttcttcgac tggacgctcg
     3601 agaactacga gaccgtccag ggccgcagcg actatatcca tcacgccgtc aactcgatcg
     3661 tcgtcgccgg cggctcgacc ttgatcgcca tgttgatcgc gatcccggcc gcctggtcga
     3721 tggccttcgc gccgtcaaag cgcaccaagg acacgctgct ctggatgctg tcgaccaaga
     3781 tgatgccgcc ggtcggcgtg ctcgtgccga tctatttgct ctaccggacc ttcggcctgc
     3841 tcgacacgct gggcggcctg atcctcgtgc tctgcctcgg caacctgccg atcgtggtct
     3901 ggatgctgtt cacctacttc aaggaaatcc ccaaggacat cctcgaggcg gcgcgcatgg
     3961 acggggccac cgtcggccgc gagctcgtct atgtgctgac gccgatggcc gtgccgggca
     4021 tcgcctcgac gcttctgctc aacgtgatcc tggcctggaa tgaggccttc tggacgctca
     4081 atctctcgac ctccgacgca gccccgctca cggtcttcat cgcctcctat tcgagcccgg
     4141 aaggcctgtt ctgggccaag ctctccgccg catcgacgct cgccatcgcg cccatcctgg
     4201 tgctcggctg gttcagccaa cggcagctcg tgcgcgggct caccttcggc gccgtcaaat
     4261 aggacctgcc atgggccgca tcacactcga aggcgttcgc aagtcgtttg gagcgcacgc
     4321 cgtcatccac ggcgccgacc tcgagatcga ggacggctcg ttcgtcgttt tcgtcggccc
     4381 ctcgggatgc ggcaagacca ccctcttgcg gctgatcgcc gggctcgagg atgtgagcga
     4441 aggccgcatc ctgatcgacg gcgccaacgt ggtcgacgtg ccggccgcca agcgcgggct
     4501 gtcgatggtc ttccaatcct atgcgctcta cccgcacatg agcgtgcggg gaaacatcgg
     4561 cttcgggctg aagatggccg gcctgccgcg caccgagatc agccgcaagg tcgaggcagc
     4621 ggcggcgacc ctcaatctca cgccctatct cgagcgcaag ccgcgcgagc tgagcggcgg
     4681 ccagcgccag cgcgtggcga tcggccgggc gatcgtccgc gagccgaagg ctttcctgtt
     4741 cgacgagccg ctgtcgaacc tcgacgcggc gttgcgcgtt cagatgcggc tggaggtcac
     4801 caagctgcag cgacagcttg cgacgaccgc cgtctacgtc acccacgacc aggtcgaggc
     4861 catgaccatg gccgaccgca tcgtggtcct aaatgccggg cgcatcgagc aatacggctc
     4921 gccgctcgaa ctctatgacc ggcccgccaa cctgttcgtc gcgggtttca tcggctcgcc
     4981 gcgcatgaac ttcatcggca aggagacggc gcaacggcac ggcgccgaca ccatcggcat
     5041 ccgccccgag cacctgaagg caagccgcga cggtgaaggc tgggaaggcc aggtgtcggt
     5101 cgccgagcat ctcggcagcg acacgttcct ccatgtcgag gtgcccgaga tcggcagcct
     5161 gaccgcccgc tcgatcggcg agcttggcct caccacgggc gatcgcgtcc ggcttctccc
     5221 tgatcccggt cgcatccatc gcttcgatcg cgacggcaag gcgatgagca cccgccctcc
     5281 gtcatgctga gcgcagcgaa ggatctcatt ccgtggcaag cggcgatgag gtccttcgct
     5341 acgctcagga cgacaacgca agaacgagaa gagcaatgta tctcgatatg ttcaaactca
     5401 ccggccgcac cgcgctggtg accggcgccg gccgcggcat cggccttgcc tgcgccgaag
     5461 ccctggccga ggccggcgca cgggtgatca tcgccgaccg cgacaccgct ctcgccgagg
     5521 agggacgagc cgccttgcgc gccaagcacg ccgacgccga gaccgtgatc atggacgtga
     5581 cggactccgg ccgcgtcacc gaagtcgccg acgagctggc gtcgcgtcat ggcaagatcg
     5641 acatcctggt caacaacgcg ggcatcgcgc gcagcgagac gccagccgaa aaggtcacgg
     5701 acgagcattg gctgaacgtc ttggacgtca atctcaacgg caccttctgg tgctgccggg
     5761 cgttcggaaa gcatatgctc cgcgcaaagt ccggcgccat cgtcaatatc gggtcgatgt
     5821 cgggcttcat cgtcaacaag ccgcaggcgc aaagctacta caacgcctcc aaggcggcgg
     5881 tgcatcacct caccaagtcg ctggcggccg aatggggctc gcgcggcgtg cgtgtcaatg
     5941 cagtggcgcc gacttacatc gccacgccgc tcaacgagtt cgtcaagtcc aac
//
LOCUS       DASWGA010000713         2436 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1094587, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000713 DASWGA010000000
VERSION     DASWGA010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1094587"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VF991_16635"
     CDS             complement(<1..465)
                     /locus_tag="VF991_16635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558124.1"
                     /translation="MPRHVLSALALLAAAPVAAQSPGLFDGSPDQLKRYTDCMALARS
                     EPLKALPVAEKWQAGGGGLAARHCVALALFEAGRYGQAATALEAIARDMGHDRPGLRA
                     ELWAQAGQAFMEAGMAERAADVQSRALELKSNDADLWLDRALSYAAMRAWPRA"
     gene            508..1368
                     /locus_tag="VF991_16640"
     CDS             508..1368
                     /locus_tag="VF991_16640"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9558125.1"
                     /translation="MTERLFIFGLGYSGREIARLARAAGWHVAGTCTGDDRAARLRDD
                     GIEVHLFDGTTAPPTEAVANASHVICSIPPGPAGDPVLRSAANLLGRARWLGYLSTTG
                     VYGDQDGGWVDENTPPRPGQPRSIERLATERAWQALGLQGGAAVDIFRLPGIYGPGRS
                     AIDQVKAGTARRIDKPGQVFSRIHVEDIAGTVLMAITQPHAGAIYNVADDLPTSTADV
                     VAYACELLGKPAPPLIPWQQAASEMSAMARSFYAENRRVRNDRIKNELGVVLRYPTYR
                     EGLRAIASAG"
     gene            complement(1365..2120)
                     /locus_tag="VF991_16645"
     CDS             complement(1365..2120)
                     /locus_tag="VF991_16645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9558126.1"
                     /translation="MNDDAKVQRLPRPDGNTIAYATTPGRTPTVAFLGGFRSDMTGTK
                     AVALEAWARRTGRAYLRFDYLGHGQSSGRFEDGTIGRWLDDSLAAIDSLTAGKLVLVG
                     SSMGGWLSLLVARARPERLAGLVLIAAAPDFTERMLLAGLSPEDRATLESDGRLLRPS
                     QYSPEPSVFTWKLIEEGRNHLLLDKMLSLPCRVRLLHGQNDPDVPWQYSLQIAAHLEA
                     PEVVTTLVKGGDHRLSTPADIARLIATVEELTR"
     gene            2164..>2436
                     /locus_tag="VF991_16650"
     CDS             2164..>2436
                     /locus_tag="VF991_16650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HEX9558127.1"
                     /translation="MPAPTLLQIVPTLASGGIARATLDAAQAVIAAGGSAIVASPGGI
                     LVPDLLRLRATHLELPESRHALWARLTLPRKLAASLSDARVSLIQAR"
BASE COUNT          391 a          869 c          819 g          357 t
ORIGIN      
        1 ggcgcgcggc caggcccgca tcgcggcgta gctcagcgca cggtcgagcc aaaggtcggc
       61 gtcgttgctc ttgagctcga gcgcgcggct ttgcacatcg gcggccctct cggccatgcc
      121 ggcttccatg aaggcctggc ccgcctgagc ccacagctcc gccctgaggc cggggcggtc
      181 gtggcccatg tcgcgggcaa tcgcctcgag cgcggtcgcc gcctgcccgt agcggccggc
      241 ctcgaacagg gccagcgcca cgcaatggcg tgccgccagg ccgccaccgc cagcctgcca
      301 tttctcggcg accggcagcg ccttcagcgg ctcgctgcgc gccaaggcca tgcagtcggt
      361 atagcgcttg agctggtcgg gcgaaccgtc gaacagcccg gggctttgcg cagcgaccgg
      421 cgccgcggcg agcagcgcaa gcgccgaaag gacgtggcga ggcaacaaca tgcttgaaaa
      481 gaaccgcgcc gcgacgatcc tgacaagatg acagagcgtc ttttcatttt cggcttgggc
      541 tatagcgggc gcgaaatcgc cagattggcc cgcgccgccg gctggcacgt ggccggcacc
      601 tgtaccggcg atgacagggc cgcccgcttg cgcgacgacg gcatcgaggt ccacctgttc
      661 gacggcacga cggcgccgcc gaccgaagcg gtggccaacg caagccacgt gatttgcagc
      721 attccacccg gcccggccgg cgatccggtg ctcagaagcg cggccaatct gctcgggcgc
      781 gcgcgctggt tgggctatct ctcgaccacc ggagtctacg gcgatcagga cggcggctgg
      841 gtcgacgaga atacgccgcc caggcccggc cagccgcgca gcatcgagcg gcttgcaacc
      901 gagcgcgcct ggcaggcgct gggtctgcaa ggcggcgcgg cggtcgacat ctttcgcctg
      961 cccggcatct acggccccgg ccgcagcgcc atcgaccagg tgaaagccgg cacggcgcgg
     1021 cgcatcgaca agcccggcca ggtcttctcg cgcatccatg tcgaggacat cgccggcacc
     1081 gtgctgatgg ccatcaccca accgcacgcc ggcgccatct acaacgtggc cgacgacctg
     1141 ccgacgtcga ccgccgatgt cgtggcctac gcctgcgagc tgctgggcaa gcccgcgccg
     1201 ccgctcatcc cgtggcagca ggcagcctcc gagatgagcg cgatggcacg ctctttctat
     1261 gccgagaacc ggcgcgtccg gaacgaccgg atcaagaacg aactgggtgt cgtgttgcgc
     1321 tatccgacct atcgcgaggg cctgcgcgcc atcgcgtcgg caggctagcg cgtcaactcc
     1381 tcgaccgtgg cgatcaagcg ggcgatgtcg gctggcgtgc tcagccgatg gtcgccgcct
     1441 ttgaccaggg tggtgaccac ctcgggcgct tcgagatggg cggcgatctg caacgaatac
     1501 tgccacggca catcgggatc attttggcca tgcagcaggc gaacccgaca gggcagcgac
     1561 agcatcttgt cgagcagcag atgattgcgc ccctcctcga tcagcttcca ggtgaagacc
     1621 gacggctcgg gcgaatattg cgacggccgt aaaagcctgc cgtcgctctc gagcgtcgcg
     1681 cgatcctcgg gcgagaggcc ggccagcagc atgcgctcgg tgaagtcggg cgcggcggcg
     1741 atcagcacca gcccggccag gcgctcgggc cgcgcgcgcg ccaccagaag cgacagccag
     1801 ccgcccatgc tcgatcccac tagcaccagc ttgccggcgg tgaggctgtc gatcgcggca
     1861 agcgagtcgt cgagccagcg gccgatcgtg ccgtcttcga agcggcccga ggactgtcca
     1921 tggccgagat agtcgaagcg caggtacgca cggccggtcc gccgcgccca ggcctcgagc
     1981 gccacggcct tggtgccggt catgtcggag cggaagccgc cgaggaacgc cacggtcggc
     2041 gtgcggcccg gcgtagtcgc ataggcgatg gtattgccgt cgggccgcgg caatcgctgc
     2101 actttggcgt catcgttcat gccatattac ctgccacagc aataagccca ctgccaagct
     2161 cacgtgcctg ctccgacgct cctgcaaatc gtccccaccc tggccagcgg cggcatcgct
     2221 cgcgccacac ttgacgccgc gcaggccgtg atcgcggccg gcggttcggc catcgtcgcc
     2281 tcgccgggcg ggatcctggt gcccgatctg ctacggctac gcgccacgca cctcgagttg
     2341 cccgaaagcc gtcatgcgct atgggcgcgg cttactttgc cgcgcaagct cgccgccagc
     2401 ctgagtgacg cgcgcgtttc gctgatccag gcgcgc
//
LOCUS       DASWGA010000714         9349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1852427, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000714 DASWGA010000000
VERSION     DASWGA010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9349
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1852427"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VF991_16655"
     CDS             <1..244
                     /locus_tag="VF991_16655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HEX9558128.1"
                     /translation="MLAASGQNDVLRTYFVTKRDGVDYNLAYIGADFKAAKTGEFDQV
                     YMNALYDYGYRQAKAGHAWHKAPPSLETPAMAPATR"
     gene            complement(267..629)
                     /locus_tag="VF991_16660"
     CDS             complement(267..629)
                     /locus_tag="VF991_16660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558129.1"
                     /translation="MAAAKSAVLAIAILLPALAMAQDSVTEFRLAQDPKNIQGCIALD
                     PSLTRVHTLTIKGGQAEIKSAGGIDDKMKLVRPNVYETVFALSGVRLDVLADLSATPK
                     TLTVVEKNRGCKWMAVQP"
     gene            complement(872..947)
                     /locus_tag="VF991_16665"
     tRNA            complement(872..947)
                     /locus_tag="VF991_16665"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(912..914),aa:Lys,seq:ctt)
     gene            complement(1042..2196)
                     /gene="rodA"
                     /locus_tag="VF991_16670"
     CDS             complement(1042..2196)
                     /gene="rodA"
                     /locus_tag="VF991_16670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEX9558130.1"
                     /translation="MSLASPNAVVALDGPSPVGFAEKIWRINWGLALVLTAIAGIGVL
                     ALYSAAGGRFDPWAARHAVRYGAAFGLMLLVALTHPKVWLALAWPIYVIALVLLVAVD
                     VVGKIGMGAQRWLVVGPMQIQPSEIAKVAVILVLARYYHGLSKEQAARFLYVLPPLAV
                     ILAPVALVMVQPDLGTAMMVLLGGAAMLFVAGVRLWMFAAAAVAAVGCLPIAWSFMHE
                     YQRKRVLTFLDPDRDPLGAGYHITQSKIAIGSGGLFGKGFLKGTQSSLNFLPEKQTDF
                     IFTTFVEEWGMAGALVLLGLFALILVWGFSIALRSQHHFGRLVALGVTAMMFLYVFIN
                     TAMVMGLLPVVGVPLPLVSNGGTAMVSVMFACGLLIGVNVYRDAQLPLRR"
     gene            complement(2193..4106)
                     /gene="mrdA"
                     /locus_tag="VF991_16675"
     CDS             complement(2193..4106)
                     /gene="mrdA"
                     /locus_tag="VF991_16675"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEX9558131.1"
                     /translation="MMRYRKGDGERSSLFTRRALLLGGAQAVLLSALAGRLYQLQVIE
                     TRRFATLAEENRINLRLLAPSRGLIFDRTGQPLAINRNNFRAMATSDRGRGVEVLVDR
                     LDQLLILGEAERARLLRELRRSRNAQPVVVRENLAWEEVARLEFNAPDLPGAFIDLGQ
                     TRDYPEGDLMSHIIGYTGRVADEDLAGRDDPVLQLATIRFGKKGVERSLEDELRGRAG
                     AVQVEVNSVGRVVRELDRTEGQPGSNALLTIDLDLQRFAADRMKEHQSGSVVVLDVVT
                     GDVLAMVSTPGFDPNTFARGITQSEWRDLLESPERPLNNKAINGVYPPGSTYKMVTAL
                     AALESKAIDPSTRLPCMGYLELGNIKFHCWLKGGHGSTNVGEAIAASCDCFFYEAARR
                     AGADRIADVGGRLGFGRQSELGLPGESAGIQPSRAWKQEKLGKPWQHGDTFNLGIGQG
                     YMNATPLQLAIMTARIANGGYEVQPNLLLASATPREELAPPPPRNKSTAPSLRLNPQN
                     LALIREGMFNVVNSGHGTANQLRIDGQGKLLDPALRFAGKTGTAQVKRITERERELGI
                     TQAQLPWHLRHHALFVCFGPADNPRYACAVIVEHGMAGGATAGPIGRDVLVETMKRDP
                     SRNTERFRKMASR"
     gene            complement(4103..4675)
                     /locus_tag="VF991_16680"
     CDS             complement(4103..4675)
                     /locus_tag="VF991_16680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558132.1"
                     /translation="MRADGLLAMLDRWGRAALPGAVLLFFVLLTLAPLRAPYLSDALP
                     LLPVLVVFQFSLAMPERLPGPLLLVLGVLLDLLLGGPGAPVGVSALGFVLIRATVANN
                     RRYLVGVPFLFQWFGFCLLALGFVVLVWAFTSLWTWLAIDPLPALIQYVVVIVIYPLI
                     APLLARVRARDPLNVPEPSRGTARPGETTP"
     gene            complement(4677..5573)
                     /gene="mreC"
                     /locus_tag="VF991_16685"
     CDS             complement(4677..5573)
                     /gene="mreC"
                     /locus_tag="VF991_16685"
                     /inference="COORDINATES: protein motif:HMM:TIGR00219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEX9558133.1"
                     /translation="MAIRDDFEVAAGQVRAAVHRFALGLLVLAAFGAMLIGKADTVLV
                     EHARVLALDLASPVLEAIARPVAAANRAIADLKEFASLREENARLREENARLLAWQTA
                     ARRLENENEGLRGLANFREGPEAAFITARIVGDSVSAYVRGALLNVGRRAGVVSGQAV
                     VTGEGLAGRVAEVGDNSARVLFVTDVNSRLPVVIERTRERAILAGDNSAKVRLTLMQG
                     VGGVQRGDRIITSGHGGSFPVGIPVGEIVETGEGHVRVRPFADFSRLEFVRVVDYGVT
                     GLIGGGSTAAPAGAQATGQRVR"
     gene            complement(5702..6742)
                     /locus_tag="VF991_16690"
     CDS             complement(5702..6742)
                     /locus_tag="VF991_16690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEX9558134.1"
                     /translation="MLSRVIGLFSADMGIDLGTANTLVYVKGRGIVLNEPSVVALTTH
                     SGKRQVLAVGEEAKMMLGRTPGNIQAIRPLRDGVIADFEVAEAMIKHFISKVHNRRSF
                     AHPQIVVCVPSGSTAVERRAIQESAESAGARKVWLIEEPMAAAIGAGLPVTEPTGSMV
                     VDIGGGTTEVAILSLGGIVYPRSVRVGGDKMDEAIIGYIRRNHNLLVGESSAERIKKT
                     IASACPPDDGEGRTMEIKGRDLMNGVPKELVITERQISESLQEPVSAIVEAVKVCLEN
                     TAPELAADIVDKGIVLTGGGALLSNMDTVLRQATGLPVSVAEDPLLCVALGTGHAVEN
                     INRLRGVLSSMY"
     gene            complement(7106..7483)
                     /locus_tag="VF991_16695"
     CDS             complement(7106..7483)
                     /locus_tag="VF991_16695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558135.1"
                     /translation="MSKRFASATMAALLMTFEAGAQGPSAPKLTCDRGPVADKTYGGT
                     AWNVYGCNDNRSVAIVSAAGSPAMPFYFLLFAEANGQYTLSGEGTGRQEFTRKAYDEL
                     SRLTPQEIDGLVRQARKASSPNQ"
     gene            complement(7492..8592)
                     /locus_tag="VF991_16700"
     CDS             complement(7492..8592)
                     /locus_tag="VF991_16700"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent alcohol dehydrogenase"
                     /protein_id="HEX9558136.1"
                     /translation="MKAAVLFKPNEPLQVVDCELDPPKAGEVRVKMKASGVCQSDWHV
                     MNGDWPSPMPIVPGHEAAGEVAECGAGVSTVKPGDHVIFSFRPHCGRCRYCTQGRTVL
                     CIGRANVPPGALYDGTLRLKHKGQGINQMARIGTFAEEVVVPEEMVVPIRKDMPWPQA
                     ALVGCCVATGVGAVTRHAKIEAGSSVLVIGCGGVGLNAIQGAVLSGAGTIIAADILDN
                     KLEMAKTFGATHTINTNTNEDAVKKVKEIAGGLGVDYSFDAVSVDKTQALAFDALAPG
                     GHAVTVGISATTVRASYSPFMMVFAEKTVSGTFYGSVRPDLDFPVLVDHYMNKRLNID
                     GLISRTYKLADINDGFKKMMAGEVARGVVVFD"
     gene            8657..>9349
                     /locus_tag="VF991_16705"
     CDS             8657..>9349
                     /locus_tag="VF991_16705"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9558137.1"
                     /translation="MVGPNRRAILRGGAGAASLAAGVLSAPGLLAQAKSPYAGTTINA
                     SCFQTTYFEYLKNYFPQFEEKTGIKVAFTMQAFPVYNQRTDLELSTKGSSLDVINVTF
                     IYSGRWIGAGWVTNLDTFTKDPKMTPADWDPEDFAGGPQSAMKNAKGETFGFSWEAGA
                     MILGAARYDLIEKAGLGLPKTFDELIKVCDAVHNKEGVAAFTADKLHHWNWIPYLMGS
                     GGAIFKAPPDNLT"
BASE COUNT         1620 a         3125 c         3157 g         1447 t
ORIGIN      
        1 catgctggcg gcgagcgggc agaacgacgt tctgcgcacc tacttcgtca ccaagcgcga
       61 cggcgtcgac tacaatctcg cttacatcgg cgcagatttc aaagcggcca agaccggcga
      121 attcgaccag gtctacatga acgcgctcta cgactacggc tatcggcagg ccaaggctgg
      181 ccatgcctgg cacaaggcgc cgcccagcct ggagacgcct gccatggcgc cggcaacgcg
      241 atagcgggat cggcgcgacc gcccgcctac ggctgtaccg ccatccactt gcagccgcga
      301 ttcttctcca cgacggtcag cgtcttgggc gttgccgaga gatcggcgag cacatccaaa
      361 cgcacgccgg acagcgcgaa caccgtttcg tagacgttgg gccgcaccag cttcatctta
      421 tcgtcgatgc caccggccga cttgatctcg gcctggccgc ccttgatcgt gagtgtatgc
      481 acgcgcgtca ggctcgggtc gagcgcgatg catccctgga tattcttggg atcctgagcg
      541 aggcggaatt cggtaaccga gtcctgcgcc atcgcaagcg cagggagcag gatcgcaatg
      601 gcgaggacgg cagatttggc tgcagccatg gtccgatacc tccggcggtt ggggcgagct
      661 gttcaatgct aagcgggaag ccgtcgaagc accactatcg aaaggactgc gagtgtgcgc
      721 gatcgcgctc atgcccgcgc tggcccgcga cgtggatcga taaagcgcgg ctccgatgcc
      781 ggcccgcacc cagctgaagc tgtaagcgca aaacctgaaa cagcgagcaa agataaaggc
      841 cggttagacg ggcctctttc gtttccggcc atggtgggcg cagcaggact cgaacctgcg
      901 acccgctgat taagagtcag ctgctctacc aactgagcta tgcgccccca ttgatcgggg
      961 catggccgga agcggcgcgg ctataccaag cagcataccc cttgtcgata gccccgcgac
     1021 aaagaaaatc tgccaggttt ttcagcgcct cagcggcaat tgcgcgtcgc ggtagacgtt
     1081 gacgccgatc agcaggccgc aggcgaacat caccgagacc atggcggtgc cgccgttgct
     1141 gaccagcggc agcggcacgc cgaccaccgg caagaggccc atcaccatgg cggtgttgat
     1201 gaagacgtag aggaacatca tggcggtgac gccgagcgcc accaggcggc cgaaatggtg
     1261 ctggctgcgc aaggcgatcg agaagcccca caccaggatc agggcgaaca ggccgagcag
     1321 caccagggcg cccgccatgc cccattcctc gacgaaggtc gtgaagatga agtcggtctg
     1381 cttctcgggc aggaagttca gcgacgactg ggtgcccttg agaaagccct tgccgaacag
     1441 gccgcccgag ccgatggcga tcttggactg ggtgatgtga tagcccgcgc ccaaggggtc
     1501 gcggtcggga tcgaggaagg tcagcacgcg cttgcgctgg tattcgtgca tgaacgacca
     1561 ggcgatcggc aggcagccga cggcggcgac cgccgcggct gcaaacatcc acagccgcac
     1621 accggcgacg aacagcatcg cggcgccgcc cagcagcacc atcatcgccg tgccgagatc
     1681 gggctgcacc atgaccaggg caaccggcgc caggatcacg gcgagcggcg gcaggacgta
     1741 gagaaagcgc gccgcctgct ccttgctgag gccgtggtag tagcgtgcca gcaccaggat
     1801 caccgccacc ttggcgatct ccgagggctg gatctgcatg ggcccgacga ccagccagcg
     1861 ctgggcgccc atgccgatct tgccgaccac gtcgacggcg accagcagca cgagcgcgat
     1921 gacgtagatc ggccaggcga gcgccagcca gaccttggga tgggtgagcg ccaccagcag
     1981 catcaacccg aacgccgcgc cgtagcgcac ggcatggcgc gccgcccagg gatcgaagcg
     2041 gccgcccgcc gccgagtaga gcgccagcac gccgatgccg gcgatcgccg tcagcaccag
     2101 cgccaggccc cagttgatgc gccagatctt ctcggcaaag ccgaccggag acggcccgtc
     2161 cagggcgacg acggcattgg gcgaggcgag gctcatcgcg acgccatctt gcgaaagcgc
     2221 tcggtgttgc gcgacggatc gcgcttcatc gtctcgacca gcacgtcgcg gccgatcggg
     2281 cccgcggtgg cgccgcccgc catgccgtgc tcgacgatga cagcgcaggc atagcgcgga
     2341 ttgtcggccg gcccgaagca gacgaacagc gcgtgatggc gcaggtgcca gggcaactgc
     2401 gcttgggtga tgcccaactc gcgctcgcgt tcggtgatgc gcttgacctg ggcggtgccg
     2461 gtcttgccgg caaagcgcaa tgccgggtcg agcaacttgc cctggccgtc gatgcgcagc
     2521 tggttggcgg tgccgtggcc ggaattcacc acgttgaaca tgccctcgcg gatcagcgcc
     2581 aggttctgcg ggttgagccg cagcgacggc gccgtggact tgttgcgcgg cggcggcggg
     2641 gccagctcct cgcgcggcgt ggccgaggcc agcagcaggt tgggctgcac ctcgtagccg
     2701 ccgttggcga tgcgcgccgt catgatggca agctgcaggg gcgtcgcgtt catgtagccc
     2761 tggccgatgc cgaggttgaa ggtgtcgccg tgctgccagg gcttgccgag cttctcctgc
     2821 ttccaggcgc ggctcggctg gatgcccgcc gactcgccgg gcaggccaag ctcgctctgc
     2881 cggccgaagc ccagccggcc gcccacgtcg gcgatgcgat cggcaccggc gcggcgggcc
     2941 gcttcgtaga agaagcagtc gcacgaggcg gcgatcgcct cgccgacgtt ggtcgagccg
     3001 tggccgccct tcagccagca atggaatttt atgttgccga gctcgaggta gcccatgcag
     3061 ggcagccgcg tcgagggatc gatcgccttg gattcgaggg cggccagcgc cgtcaccatc
     3121 ttgtaggtcg agcccggcgg atagacgcca ttgatcgcct tgttgttgag cggccgctcg
     3181 gggctttcga gcaggtcgcg ccactcgctc tgggtgatgc cgcgagcgaa ggtgttggga
     3241 tcgaagccgg gcgtggacac catcgccagc acgtcgccgg tgacgacgtc gagcaccacc
     3301 accgagccgc tctgatgctc cttcatgcgg tcggcggcga agcgctgcag gtcgaggtcg
     3361 atggtgagca acgcgttaga gccgggctgg ccctcggtgc ggtcgagctc gcgcaccacg
     3421 cggccgaccg aattgacctc gacctggacg gcgccggcgc ggccgcgcaa ttcgtcctcg
     3481 agcgagcgct ccacgccctt cttgccgaag cgtatggtgg cgagctgcag caccggatcg
     3541 tcgcggccgg cgaggtcctc gtcggcgacg cggccggtgt agccgatgat gtggctcatc
     3601 aagtcgcctt cgggatagtc gcgcgtctgg cccaagtcga tgaacgcgcc gggcaggtcg
     3661 ggcgcgttga actccagccg cgccacctcc tcccaggcga gattctcgcg caccacgacg
     3721 ggctgggcgt tgcggctgcg ccgcagctcg cgcagcaagc gggccctctc ggcctcgccc
     3781 aggatgagaa gctggtcgag gcgatcgacc agcacctcga cgccgcggcc gcgatccgag
     3841 gtcgccatgg cgcggaagtt gttgcggttg atggcgagcg gctggccggt gcggtcgaag
     3901 atcagcccgc gcgacggcgc cagcagccgg aggttgatgc ggttttcctc ggccagcgtg
     3961 gcgaagcgcc gggtttcgat gacctgcagc tgatagagcc ggccggccag ggccgacagc
     4021 agcaccgcct gcgcgccgcc cagcagcagg gcgcggcgcg tgaacaggct ggaccgttcg
     4081 ccgtcgccct tgcggtagcg catcatggcg tggtctctcc cggccgcgcc gtgccgcgcg
     4141 acggctcggg cacgttcagc ggatcgcgtg cccgcacgcg ggccagcagg ggggcgatca
     4201 gcgggtagat cacgatcacc acgacatact ggatcagggc gggcagcgga tcgatggcga
     4261 gccaggtcca cagcgaggtg aaggcccaga ccagcaccac gaaaccgagc gccagcaggc
     4321 agaagccgaa ccattggaag aggaacggca cgcccaccag atagcgtcgg ttgttggcca
     4381 cggtggcgcg gatcagcacg aagcccagcg cgctcacgcc gaccggcgcg ccgggaccgc
     4441 ccagcaacag atcgagcagc acgcccagga cgagcaggag cggcccgggc agccgctcgg
     4501 gcatggccag gctgaactgg aagacgacca gcaccggcag caacggcagg gcgtcggaca
     4561 ggtagggcgc gcgcaagggc gccagggtca gcagcacgaa aaacagcagg accgcgccgg
     4621 gcagcgccgc gcggccccag cggtcgagca tggcgagcag accgtcggcc ctcatgtcag
     4681 cgaactctct gcccggtcgc ctgggcgcca gccggcgctg cggtcgagcc gccgccgatc
     4741 aggccggtca cgccgtagtc gacgacgcgc acgaactcga gccgcgagaa gtcggcaaac
     4801 ggccgcaccc ggacatggcc ctcgcccgtc tcgacgatct cgccgaccgg gatgccgacc
     4861 ggaaagctgc cgccatggcc cgaggtgatg atgcgatcgc cgcgctgcac gccgccgacg
     4921 ccctgcatca gcgtgaggcg aaccttggcg gagttgtcgc cggccaggat ggcgcgctcg
     4981 cgggtgcgct cgatcaccac cggcaggcgc gagttgacgt cggtgacgaa cagcacgcgc
     5041 gcgctgttgt cgccgacttc ggcgacgcgg ccggccaggc cctcgccggt caccaccgcc
     5101 tggcccgaca ccacgccggc gcggcggccg acattgagca gcgcgccacg cacataggcg
     5161 ctgacgctgt cgccgacgat gcgggcggtg atgaacgcgg cttccggccc ctcgcggaaa
     5221 ttggccagcc cgcgcagccc ttcgttctcg ttctccaagc gccgcgccgc ggtctgccag
     5281 gccagcaggc gggcgttttc ctcgcgcagg cgggcgttct cctcgcgcag ggaggcaaat
     5341 tccttgaggt cggcgatagc gcggttggcg gcggcgaccg ggcgggcgat ggcctcaagc
     5401 accgggctgg cgaggtcgag cgccaggacg cgggcatgct cgaccaggac ggtgtcggcc
     5461 ttgccgatca gcatggcgcc gaacgcggcg agcaccagca ggccgagcgc aaagcggtgc
     5521 acggctgcgc gcacctggcc agcggctacc tcgaaatcgt cccggatcgc catgtctggc
     5581 ccattctact ccaagcgggc tctggggttc agcattactc gccgtcgcat cgccaaatag
     5641 gctcctctcc ccctagcggg ggagaagaat ttgaatggag gtcaggactt cggacgcgat
     5701 ctcagtacat cgacgacagg acgccgcgca gtcgattgat gttttccacc gcatggccgg
     5761 tgccgagggc gacgcagagc agcggatcct cggccaccga gaccggcagg cccgtggcct
     5821 ggcgcagcac ggtgtccatg ttggagagca gggcaccgcc gccggtcagc acgatgccct
     5881 tgtcgacgat gtcggcggcg agttccggcg cggtgttctc gaggcacacc ttgacggcct
     5941 cgacaatggc gctcaccggc tcctgcaggc tctccgagat ctgccgctcg gtgatgacca
     6001 gctccttggg cacgccgttc atcaggtcgc ggcccttgat ttccatggtc cggccctcgc
     6061 cgtcgtcggg cggacaggcc gaggcgatgg tcttcttgat gcgctcggcc gagctttcgc
     6121 cgaccagcag gttatggttg cggcggatat agccgatgat ggcctcgtcc atcttgtcgc
     6181 ccccgacccg caccgagcgc ggatagacga tgccgcccag cgacagaatg gccacttccg
     6241 tggtaccgcc gccgatatcg accaccatcg agccggtcgg ctcggtgacc ggcagcccgg
     6301 cgccgatcgc cgcggccatc ggctcctcga tcagccagac cttgcgcgcg ccggcgctct
     6361 cggccgattc ctggatggcg cggcgctcga cagcggtgga gccggagggc acgcagacta
     6421 cgatctgcgg atgggcgaaa gagcggcggt tatgaacctt ggagatgaag tgcttgatca
     6481 tcgcctcggc gacttcgaag tcggcgatga cgccgtcgcg caacgggcgg atcgcctgga
     6541 tgttgcccgg cgtgcggccc agcatcatct tggcttcctc gccgaccgcg aggacctggc
     6601 gcttgccgct atgcgtggtc agggccacga cggacggctc gttcaggaca atgccgcgcc
     6661 ccttcacgta gaccaatgtg ttggccgtcc cgaggtcgat tcccatgtcc gccgaaaaga
     6721 gcccgatcac acgcgagagc attgagttaa gtctctgtaa ttgctaagaa aattaatcgg
     6781 gcagtgcacg tgcgggcccg acgccaaggg tgcggtcggg tttagaccgg caggctgggt
     6841 ctcgcaaggc tattcacggc gaaagatcgg gcaactggga ttcaccaagg agatcgagaa
     6901 gggtctcagc gagccgatct agacgcgggg agcgcgcgac tttcgtctct gtcatcgcgc
     6961 gcggggtacc cccgcgccga agcgcagcga aggatctcat gcccgtggca agcggcgatg
     7021 aggtccttcg ctgcgctgag gacgacggta cacttcgggc tctatatgcg cgatctgggc
     7081 aaggcacgac cgccgggcta gccgcttact gattggggct tgacgctttc cgcgcttgcc
     7141 tgaccagccc gtcgatctcc tgcggcgtca agcggctcaa ctcgtcatag gccttgcgcg
     7201 tgaactcctg gcgtcccgtt ccttcgccgc tcagcgtgta ttggccgttg gcttcagcga
     7261 aaaggagaaa atagaacggc atggccgggc tgccggcagc cgatacgatc gccaccgatc
     7321 gattgtcgtt gcagccatag acgttccacg cggtgccgcc gtaggtcttg tccgcgaccg
     7381 gccctcgatc acaggtgagc ttgggcgccg acggtccctg cgcgccggcc tcgaacgtca
     7441 tcaggagagc cgccatcgtc gcggaggcga agcgtttgct catcgccggc tctagtcaaa
     7501 aaccacgaca ccgcgggcga cttcgccggc catcatcttt ttaaagccgt cgttgatgtc
     7561 ggcgagcttg taggtccggc tgatcaggcc gtcgatgttc agccgcttgt tcatgtagtg
     7621 gtcgaccagc accgggaagt cgaggtcggg ccgcaccgag ccgtagaagg tgccgctcac
     7681 cgtcttctcg gcaaacacca tcatgaaggg cgagtaggag gcgcgaaccg tcgtcgccga
     7741 aatgccgacc gtgaccgcgt ggccgcccgg cgccagggcg tcgaaggcca gcgcctgggt
     7801 cttgtcgacc gacaccgcgt cgaaggaata gtcgacgccc agcccgccgg cgatctcctt
     7861 caccttcttg acggcgtctt cgttggtgtt ggtgttgatg gtgtgggtgg cgccgaaggt
     7921 tttagccatc tcgagcttgt tgtcgaggat gtcggcggcg atgatggtgc cggcgcccga
     7981 cagcacggcg ccctggatgg cgttcaggcc gacgccgccg cagccgatca ccagcaccga
     8041 cgagcccgcc tcgatcttgg cgtggcgggt gacggcgccg acgccggtcg ccacgcagca
     8101 gccgaccagg gcggcctgcg gccacggcat gtccttgcgg atcggcacca ccatctcctc
     8161 gggcacgacg acctcctcgg cgaaggtgcc gatacgcgcc atctggttga tgccctggcc
     8221 cttgtgcttg aggcgcaagg tgccgtcgta gagcgcgccg ggcggcacgt tcgcgcggcc
     8281 gatgcacaac acggtacggc cctgggtgca gtagcggcag cgcccgcaat gcgggcggaa
     8341 ggagaagatc acgtggtcgc ccggcttcac cgtgctcaca ccggcgccgc attcggcgac
     8401 ctcgcccgcc gcctcgtggc cgggcacgat cggcatcggc gaaggccagt cgccgttcat
     8461 gacatgccag tcgctctggc acacgcccga cgccttcatc ttgacccgca cctcgccggc
     8521 cttgggcgga tcgagctcgc agtcgacgac ctgcaagggc tcgttgggct tgaacagaac
     8581 ggcggctttc attgcatttc ctcccgatgc ggaccgccac tatactcgac gaaaagctcc
     8641 ttgggaggag atgcacatgg ttggacccaa tcgccgggcg attctgcgcg gcggcgccgg
     8701 cgccgcttcc cttgccgccg gcgtgctgtc ggcccccggc ctgctcgcgc aggccaaatc
     8761 gccatacgcc ggcacgacga tcaacgcctc gtgcttccag accacttact tcgagtatct
     8821 caagaactac ttcccgcagt tcgaagagaa gaccggcatc aaggtggcct tcaccatgca
     8881 ggccttcccc gtctacaacc agcgcaccga cctcgaactg tcgaccaagg gctcctcgct
     8941 cgacgtcatc aacgtcacct tcatctattc cggccgctgg atcggcgcgg gctgggtcac
     9001 caacctcgac accttcacca aggatcccaa gatgactccg gccgactggg acccggagga
     9061 ttttgccggc ggcccgcaat cggcgatgaa gaacgccaag ggcgagacct tcggcttcag
     9121 ttgggaagcc ggcgccatga tcctgggcgc ggcgcgctac gacctgatcg aaaaagccgg
     9181 cctcggcctg cccaagacgt tcgacgagct gatcaaggtg tgcgacgccg tccacaacaa
     9241 ggaaggcgtc gccgccttca ccgccgacaa gctgcatcac tggaactgga tcccctacct
     9301 gatgggctcg ggcggcgcga tcttcaaggc gccgcccgac aacctgacg
//
LOCUS       DASWGA010000715         4755 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_328483, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000715 DASWGA010000000
VERSION     DASWGA010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4755
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328483"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..930
                     /locus_tag="VF991_16710"
     CDS             <1..930
                     /locus_tag="VF991_16710"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9558138.1"
                     /translation="SSVWMALTGIFNSHLMLALAIEKFGTEPQKRHWLPRLASGEVRG
                     GLALTEPDAGTDLQAIRLTARRDGDHYVLNGTKTWISNGIEGSCFALLVKTNPEASPR
                     YSGMSLFIAPKGPGFRVGRKLEKLGYKSIDSAELIFEDYRVPADHLIGEVEGRGFTQV
                     AGGLELGRINVAARGVGIAEGALRLATSYSQIRKTFGKPICEHQAIQLKLGEMATRAR
                     AARLLTLDAADAFDRGERCDLEAGMAKYFSSEAALENSIESMRIHGAYGYSKEYDIER
                     LYRDAPLTCIGEGTNEMQRIIIARQWIKRNAVI"
     gene            927..2069
                     /locus_tag="VF991_16715"
     CDS             927..2069
                     /locus_tag="VF991_16715"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9558139.1"
                     /translation="MNAKPLQGVRVLTLEQFGAGPYGTMFLAELGAEVIKVEAPEGDP
                     SRHVGPHKLGKADSEYFQAWNLGKKSVTLDIKSAEGRRQFAALVKTADCVVNNLRGTQ
                     PAKLGIDYASLKHLKPSIVCLHISAYGRANERQDWPGYDFLMQAEAGLMELTGEPDGP
                     PTRVGVSMIDSMSGLTGIVGLLSCLLRARTTGEGCDVETCLYDVAMHQLTYPGVWYLN
                     EGDVSPRVPRSAHLSLAPVQTFPTKDGWIFIMCMTQKFWLSLCEATSRADLLDDPRFP
                     DPNTRAKNRAELTGELDRTFRTRTTADWLSRLNGLLPAAPVYRLDEALDSGFARAAGM
                     VSTVPHPVRGSLRVIANPIRIDGERPAQAACSPLGADNDKLLGNAT"
     gene            2066..3172
                     /locus_tag="VF991_16720"
     CDS             2066..3172
                     /locus_tag="VF991_16720"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX9558140.1"
                     /translation="MKLEGLKVVDLSWFLPGPYLTTSLADHGATVIKVEPPGEGDPGR
                     HIRPADQRTSVFFRNMGRGKKSVVLDLKSEQGRADLFRLACESDVLVESFRPGVAQRF
                     GVGYEAVSEKNPGIVYCSISAFGQDGAYPGRAAHDLALEAMTGVLSLTLGDDGRPAIP
                     GVPMADVTAGLHGLAGVLMALLHRQTTGRGDYLDISMHEALMASCANVVGSAFAEGKQ
                     PEVKQQRTTGGSAFYRVYDTADGRQLVLAGQEMKFVKNLLGALGRPELAPLCEWPGPH
                     QKPVVELLEATFRQKSLDHWMKWLATLDLCYGPVNTLPEAIEDPNLLKRGMIVTDEDG
                     RKHFAPVVRFKNEPSRPLYREPLLGEHTDEVLKH"
     gene            3216..4373
                     /locus_tag="VF991_16725"
     CDS             3216..4373
                     /locus_tag="VF991_16725"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9558141.1"
                     /translation="MIKRFHVLYVGQIELDNVGLNGTPADERRYSNQRLSEVFETARK
                     VARVMDDLGYYALWTAEHHFQREGYECLPNLVQLGLWLATQTKRLKFGCAFNVLPMWH
                     PIRLAEDYAMADIVTDGRVIMGVGRGYHSREVETFGAPLLDAEANREYFEEQLQLLLK
                     CFNEEALHFKGKYFECPPPVDYRGYRLKDITMVPRPKHLPVDIWMPIASGRTIDMMAR
                     YGLKAMVDLNGEKILDNVVREYHAACARHGRPKQLGEDMIWGAGLYLAGSQEEAIRRV
                     EPAHDERYKWFAPFGFVRYADDQGRTWGTPGAPTSIPSIRDGVKQKAWFCGPPAEVID
                     GIRSIEAKYPGLEDFMVHWAEGLPPAEFTEQLRWFAKDVMPAFRGAKIAAE"
     gene            complement(4537..>4755)
                     /locus_tag="VF991_16730"
     CDS             complement(4537..>4755)
                     /locus_tag="VF991_16730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation response protein"
                     /protein_id="HEX9558142.1"
                     /translation="TTAALMAWEGATLGAHGGDARRLLLSRLVIEHRLAPQDPLSLAE
                     LDWEQEAMDLLLQDEPVPLAKATALLSS"
BASE COUNT          841 a         1606 c         1534 g          774 t
ORIGIN      
        1 tcgtcggtgt ggatggcgct caccggcatc ttcaactccc acctcatgct ggcgctcgcc
       61 atcgagaagt tcggcaccga gccgcagaag cgccattggc tgcccaggct cgcctcgggc
      121 gaggtgcgcg gcgggctggc gctcaccgag cccgatgccg gcaccgacct tcaggcgatc
      181 cgtctgaccg cccggcgcga cggcgatcat tacgtgctga acggcaccaa gacctggatc
      241 tccaacggca tcgagggctc gtgcttcgcg ctgctggtca agaccaaccc cgaggcctcg
      301 ccgcgctatt ccggcatgag cctgtttatc gcccccaagg gaccgggctt ccgggtcggc
      361 cgcaagctcg agaagctcgg ctacaagtcg atcgattcgg ccgagctgat cttcgaggat
      421 taccgcgtgc cggccgatca tctgatcggc gaggtcgagg gccgtggctt cacccaggtc
      481 gcgggtgggc tggaactggg ccgcatcaac gtcgcggcac gcggcgtcgg cattgccgaa
      541 ggggcgctca ggctcgccac cagctattcc cagatccgca agaccttcgg caagccgatc
      601 tgcgagcacc aggcgatcca gctcaagctc ggcgagatgg ccacgcgcgc ccgcgccgcg
      661 cgcctgctga cgctcgatgc cgccgatgcc ttcgatcgcg gcgagcgctg cgatctcgaa
      721 gccggcatgg ccaagtactt ctcgtcggag gcggcgctgg agaacagcat cgaatccatg
      781 cgcatccatg gcgcctacgg ctactccaag gagtacgaca tcgagcggct ctatcgcgac
      841 gcgccgctca cctgcatcgg cgagggcacc aacgagatgc agcgcatcat catcgcccgg
      901 caatggatca agcggaacgc cgtcatatga acgccaagcc tctgcagggc gtgcgcgtgc
      961 ttaccttgga gcagttcggg gcgggaccgt acggcacgat gttcctggcc gagttgggcg
     1021 ccgaggtgat caaggtcgag gcgccggagg gcgatccctc ccggcatgtc ggccctcata
     1081 agctcgggaa ggccgacagc gaatacttcc aggcctggaa cctcggcaag aagagcgtga
     1141 ccctcgacat caagtccgcc gagggccgac ggcagttcgc ggcgctggtg aagacggcgg
     1201 actgcgtcgt caacaacctg cgcggcaccc agcccgccaa gctcggcatc gattatgcga
     1261 gcctgaagca tctgaagccc tcgatcgtct gcctgcatat ctcggcctat ggccgcgcca
     1321 acgagcgcca ggactggccg ggctacgatt ttctgatgca ggccgaggcc ggcctgatgg
     1381 aactgacggg cgagccggac ggcccgccga cccgcgtcgg cgtgtcgatg atcgacagca
     1441 tgagcggatt gacgggcatc gtcggcttgt tgagttgcct gttgcgcgcg cgcacgacgg
     1501 gcgagggctg cgacgtcgaa acctgcctct acgatgtggc catgcatcaa ctcacttatc
     1561 ccggcgtgtg gtatctcaat gaaggcgacg tctcgccccg ggtaccgcgc agtgcgcacc
     1621 tgtcgctggc gccggtccag actttcccga ccaaggacgg ctggatcttc atcatgtgca
     1681 tgacccagaa gttctggctg tccctgtgcg aggcgaccag ccgcgctgac cttttagacg
     1741 atccgcgctt tcccgatccc aacacgcgcg ccaaaaaccg cgccgagctg accggcgagc
     1801 tcgatcgcac gttccgcacg cgcacgacgg cggactggct cagccggctg aacggtctcc
     1861 tgccggcagc gcccgtctat cggctcgacg aggccctcga cagcggcttc gcgcgcgcgg
     1921 ccggcatggt ctcgaccgtg ccgcatccgg tgaggggcag tctgcgcgtg atcgccaatc
     1981 ccatccgcat cgacggcgaa cggccggccc aggccgcgtg ttcgccgctc ggtgccgaca
     2041 acgacaagct cctgggcaac gccacatgaa acttgaaggg ctgaaggtcg tcgacctgtc
     2101 gtggttcctg ccgggaccgt atctcaccac ctcgctagcc gatcacggcg ccaccgtgat
     2161 caaggtcgag ccgccgggcg agggcgatcc cggtcgccac atcaggccgg cggaccagcg
     2221 cacctccgtc ttctttcgca acatgggccg cggcaagaag agcgtcgtcc tcgatctcaa
     2281 gagcgagcag ggccgcgccg atctgttccg gctggcctgc gagtccgacg tgctggtgga
     2341 gtccttccgc cccggcgtcg cccagcgctt cggcgtcggc tacgaggcgg tgagcgaaaa
     2401 gaatcccggc atcgtctatt gctcgatcag cgccttcggc caggacggcg cctatcccgg
     2461 ccgcgccgcg catgatctcg cgctcgaggc catgaccggc gtgctgtccc tgacgctggg
     2521 tgacgacggc cggccggcca ttcccggcgt gcccatggcc gacgtgactg cgggcctgca
     2581 cggactggcc ggcgtgctga tggcgctgct gcaccgccag accaccggcc gcggcgatta
     2641 cctcgacatc tccatgcacg aggcgctgat ggcgtcctgc gccaacgtcg tcggctcggc
     2701 cttcgccgag ggcaagcaac cggaggtcaa gcagcagcgc actaccggcg gctcggcctt
     2761 ttaccgcgtc tacgacacgg cggacggacg gcagctcgtg ctggccggcc aggaaatgaa
     2821 gttcgtgaag aaccttctgg gcgcgctcgg ccggcccgag ctggcgccct tgtgcgaatg
     2881 gcccggccca caccagaagc cggtggtcga gctcctcgaa gccaccttca ggcagaagtc
     2941 gctcgatcat tggatgaagt ggctggccac gctcgacctc tgctacgggc cggtcaacac
     3001 cctgcccgag gcgatcgagg atccgaacct tctgaagcgc ggcatgatcg tgaccgacga
     3061 ggacggccgc aagcacttcg cgcccgtcgt gcgcttcaag aacgagccgt cacgcccact
     3121 ctaccgcgag ccgctgctgg gcgagcatac ggacgaagtc ttgaagcact agtcggtgta
     3181 gaattcagta tcatgtcgtc gagggagcgc atcacatgat caagcgattc cacgttctgt
     3241 atgtcggcca gatcgagctg gacaatgtcg gtctcaacgg aacgcccgcc gacgagcgcc
     3301 gctattccaa ccagcgcctg agcgaggttt ttgaaacggc acgcaaagtg gcgcgggtca
     3361 tggatgacct cggctactac gcgctgtgga cggccgagca ccacttccag cgcgagggct
     3421 acgaatgcct gcccaacctg gtgcagctcg gcctgtggct ggccacccag accaagcgcc
     3481 tgaagttcgg atgcgccttc aatgtcctgc cgatgtggca tcccattcgg ttggccgagg
     3541 actacgcgat ggccgacatc gtgacggatg gccgcgtcat catgggcgtc ggccgcggct
     3601 accacagtcg cgaggtggaa accttcggtg cgccgctgct cgatgccgag gccaaccgcg
     3661 aatacttcga ggagcagctt cagctcctgt tgaagtgctt caacgaggag gccctccact
     3721 tcaagggaaa gtacttcgag tgtccgccac ccgtcgacta cagaggctat cggctgaagg
     3781 acatcacgat ggtgccacgg cccaagcacc tgccggtcga tatttggatg ccgatcgcca
     3841 gcggccggac catcgacatg atggcgcgct atggcctgaa ggccatggtc gacctgaacg
     3901 gcgagaagat cctcgacaac gtcgtgcgcg agtaccacgc cgcctgtgcc cgccacggcc
     3961 ggcccaaaca gctcggcgag gacatgatct ggggcgctgg cctctacctc gccggcagcc
     4021 aggaagaagc gatccgccgc gtcgagccgg cccatgacga acgctacaag tggttcgcgc
     4081 cgttcggctt cgtgcgctat gccgacgatc agggccgcac ctgggggacc ccgggcgcgc
     4141 cgacgtctat cccctcgatc cgcgacggcg tgaagcagaa ggcctggttc tgtggcccgc
     4201 cggccgaggt catcgatggc atcagatcga ttgaagccaa gtaccccggg ctcgaggatt
     4261 tcatggtcca ctgggccgag ggactgccgc ccgcggaatt caccgagcag ctacggtggt
     4321 tcgcgaagga cgtgatgccg gctttccggg gagcgaagat cgccgccgag tagagcggac
     4381 ccgagtccag cgcggcggcg atctgtggga gcgtcacgcc ctctttctcg ccgcgcagaa
     4441 agacataaag cacggcggaa aggcctctcc gtcgtcctga gcgtaagcga aggacctcat
     4501 cgccgcttgc caccggcatg agattcttcg ctgcgctcag gatgacaaga gggccgtcgc
     4561 cttagccagc ggcacgggct cgtcctgcag caacaggtcc atcgcttcct gttcccagtc
     4621 caactcggca agagacagcg gatcctgcgg cgccagccga tgctcgatca ccaggcgcga
     4681 cagcagcagg cgtcgggcat cgccgccgtg ggcgccgagc gtcgcgcctt cccaggccat
     4741 cagcgctgcc gtcgt
//
LOCUS       DASWGA010000716         3003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1095206, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000716 DASWGA010000000
VERSION     DASWGA010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1095206"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..358
                     /locus_tag="VF991_16735"
     CDS             <1..358
                     /locus_tag="VF991_16735"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HEX9558143.1"
                     /translation="DATIAAMERLGAQRARLQAAIGPCIGRESYEVGPEFPAPFLAQD
                     DANAVFFRAAPRAGHFLFDLAGYLAHRLALAGVSASATGHDTLRASDDFFSYRRNTLE
                     GVRDYGRGLSAIALKA"
     gene            440..1384
                     /locus_tag="VF991_16740"
     CDS             440..1384
                     /locus_tag="VF991_16740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558144.1"
                     /translation="MTLVCLLALAACGQPPRPFEHDDSEAPVRALPQDKTELAISPPK
                     NMPPEMAKRVAAALAVELQSYGIVAAVQPAAAPIQVNGTMSTRDADLGIEIQIDWRVA
                     GAPAAVEPATSKTRTRPEDYAEANERLVSRIAQQAAPRVATLIGRPPTFLPRSPGQVA
                     AGVSVPMEPDVAPALAAASVPGSAPTPPAQQQPQVKVLVAPVTGAPSDGNRQLYSGMR
                     RALGSSKIVIVDAAGPDIFTVVGTVNLTAIDDQKGQLVIKWFLKDPTGKTVGDLEQSN
                     PVPLAAAKGSWAGFGDIVATAASEGVLELLEKAINRSH"
     gene            1509..>3003
                     /locus_tag="VF991_16745"
     CDS             1509..>3003
                     /locus_tag="VF991_16745"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558145.1"
                     /translation="MFDFRKSVATFIAAASVAGLLGAVPAEAQTLKVVMHSDLKILDP
                     IWTTAYIVRNHGYLVWDTLFAMDEKFDVKPQMVDKYDVSADKLTWAFTLRDGLEWHDG
                     KPVTSEDCVASIKRWAAKDSMGQKMMASVMDFEVVDAKTFKMKMKEPYGLVLQSLGKP
                     SSNVPFMMPARVAATDPNTQIKAEDVIGSGPFIFARDEWKPGEKTVYVKNPKYKPRSE
                     PANGLAGGKVAKVDRVEWIWISDAQTQVAALQNGEIDMIESPSHDLLPLLAKDKNIKL
                     FNGNPTGNQYTFRFNSTAKPFDNPKIRHAVMVAFNQEDFLKATIGDPAYFKPCKAPFV
                     CGTPLASDAGMADVLNANTAKAKQLLTEAGYDGTPIVLMQSTDLPVLTNLAPVAKALM
                     ERAGFKVDMVAMDWQTLVARRAKKDPPDKGGWHAFLTSWVAADILNPVMAGFFNASCD
                     KAMFGWPCDPTIEKFRDQFARESDPAKQKQIVEALQTYWAMNPTHVNL"
BASE COUNT          538 a         1041 c          967 g          457 t
ORIGIN      
        1 cgatgccacg atcgccgcca tggaacggct gggcgcccag cgcgcgcgcc tgcaggccgc
       61 gatcggcccc tgcatcggcc gcgagtccta cgaagtcgga ccggaattcc ccgcgccgtt
      121 cctggcgcag gacgacgcca acgctgtctt cttccgggcc gcgccgcgcg ccggccattt
      181 cctgttcgat ctcgcgggct atctcgccca tcgcctggcg ctcgccggcg tgtcggcgag
      241 cgcgaccggc catgacacgc tcagggccag cgacgatttc ttcagctatc gccgcaacac
      301 gctcgaaggc gtgcgcgact acggccgcgg cctgtcggcg atcgcgctaa aggcctgacg
      361 tgccctatct ggtcatcctg gtgttctgct gtctcctcgg actgatcgcg acatgtgcca
      421 tgctatgagg cgccatgtcg tgacgctcgt ctgcctgctc gccctggccg cgtgcgggca
      481 gccgcccagg ccgttcgagc acgatgattc agaggcgccg gtgcgggcct tgccgcagga
      541 caagaccgaa ctggcgatct cgccgcccaa gaacatgccg ccggagatgg caaagcgggt
      601 tgccgccgcg ctcgccgtcg agctccaatc gtacggcatc gtggcggcgg tccagccggc
      661 ggcggcgccc atccaggtca acggcaccat gagcacgcgc gacgccgatc ttggcatcga
      721 aatccagatc gactggcgtg tcgcgggcgc gccggcggcg gtcgagcccg cgaccagcaa
      781 gacgcgcacg cggccggagg attacgccga ggcgaacgaa cggctggtgt cgcgcatcgc
      841 ccagcaggcc gccccccggg tggcgacgct gatcggccgg ccgccgacct tcctgccgcg
      901 ctcgcccggc caggtcgccg ccggggtgag cgtgcccatg gagccggacg tcgcccccgc
      961 cttggcggcg gccagcgtgc ctggctcggc gccgacgcca ccggcgcaac agcaaccgca
     1021 ggtcaaggtg ctggtggcgc cggtgaccgg cgcgccgtcc gacggcaacc gccagctcta
     1081 ctccggcatg cgccgcgcgc tcggttcgag caagatcgtc atcgtcgatg cggccgggcc
     1141 cgacatcttc accgtggtcg gcacggtgaa cctgacggcg atcgacgatc aaaagggcca
     1201 gctcgtcatc aaatggttcc tgaaagatcc cacgggcaag acggtcggcg acctcgaaca
     1261 gtccaacccg gtgccgctcg ccgcggccaa gggctcgtgg gccggattcg gcgatatcgt
     1321 cgccaccgcc gcctccgaag gcgtgctcga actgctcgag aaggcgatca atcgatcgca
     1381 ctaggtgggc gggggccggc gcgtgcggcc ccgaatcggc ttgtcagagg ggggcctgcg
     1441 gctgctactg tcgccgacag cggctcgatt cttgcagaga agcccgcgca ctagggagac
     1501 ggcagcctat gttcgatttc aggaaatcgg tcgcgacctt cattgccgcc gcgagcgtgg
     1561 ccggcctgct gggcgcggtg ccggccgagg cacagacgct caaggtcgtg atgcattcgg
     1621 atctgaagat tctcgatccg atctggacca ccgcctacat cgtgcgcaat cacggctatc
     1681 tcgtctggga cacgctgttt gcgatggacg agaagttcga cgtcaagccg cagatggtcg
     1741 acaagtacga cgtctcggcc gacaagctca cctgggcctt caccttgcgc gacggcctgg
     1801 aatggcacga cggcaagccg gtcacgtcgg aagactgcgt cgcctcgatc aagcgttggg
     1861 cggccaagga ttcgatgggc cagaagatga tggcctcggt catggatttc gaggtcgtcg
     1921 acgccaagac cttcaagatg aagatgaagg agccgtacgg cctggtcctg cagtcgctcg
     1981 gcaagccgtc gtcaaacgtg ccgttcatga tgccggcgcg ggtcgccgcc accgatccca
     2041 acacgcagat caaggccgag gacgtgatcg gctcgggtcc gttcatcttc gcacgcgacg
     2101 aatggaaacc cggcgagaag accgtctacg tcaagaatcc gaagtacaag ccgcgcagcg
     2161 aaccggccaa cggcctggcc ggcggcaagg tcgccaaggt cgacagggtc gaatggatct
     2221 ggatctccga cgcccagacc caggtcgcgg cgctccagaa cggcgagatc gacatgatcg
     2281 aatcgcccag ccacgacctg ctgccgctgc tcgccaagga caagaacatc aagctgttca
     2341 acggcaatcc gaccggcaac cagtacacct tccgcttcaa cagcacggcc aagccgttcg
     2401 acaatcccaa gatccgccat gccgtcatgg tcgccttcaa ccaggaggac ttcctcaagg
     2461 cgacgatcgg cgatcccgcc tacttcaagc cctgcaaggc gccattcgtc tgcggcacgc
     2521 cgctggccag cgacgccggc atggccgacg tgctgaacgc caacaccgcc aaggccaagc
     2581 aactgctgac cgaggcgggc tacgacggca cgccgatcgt gctgatgcag tcgaccgacc
     2641 tgccggtcct gaccaacctc gccccggtcg ccaaggcgct gatggagcgc gccggcttca
     2701 aggtcgacat ggtggcgatg gactggcaga cgctggtcgc ccgccgcgcc aagaaggacc
     2761 cgccggacaa gggcggctgg cacgccttcc tcacctcgtg ggtggccgcc gacatcctca
     2821 atccggtgat ggccggcttc ttcaacgcct cgtgcgacaa ggccatgttc ggctggccgt
     2881 gcgaccccac catcgagaag ttccgcgacc agttcgccag ggaatccgac cctgccaagc
     2941 agaagcaaat tgtcgaggcc ctgcagacct actgggcgat gaatccgacc cacgtcaatc
     3001 tcg
//
LOCUS       DASWGA010000717         1596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_81469, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000717 DASWGA010000000
VERSION     DASWGA010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81469"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VF991_16750"
     CDS             <1..282
                     /locus_tag="VF991_16750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9558146.1"
                     /translation="WWRQGMMGGAKAHYDGVVAFSQTDFTDDLKKITVPVLVMHGDDD
                     QIVPYADSGPLSAKLLKAGTLKTYKGFPHGMPTTEADTINADLLAFIKG"
     gene            complement(358..744)
                     /locus_tag="VF991_16755"
     CDS             complement(358..744)
                     /locus_tag="VF991_16755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558147.1"
                     /translation="MCDYSLEAYRSRPAAEGEKLTLERFPSGSMGFATGPSCDLAVCV
                     PEATHLLVEGLGESTQQAYGVGAVEQVVMTRIDGGLYKDAVRFSNGTEVLLQKLDRGL
                     TAVIVGFAEKPGVADVSVTPAVPEYV"
     gene            881..>1596
                     /locus_tag="VF991_16760"
     CDS             881..>1596
                     /locus_tag="VF991_16760"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9558148.1"
                     /translation="MATVIHNAAIVTVDDRDTVHYDAAIAIERDRIAAIGSSADLLAR
                     YPAAERLDGRGKMVMPGFANVHTHLTMTLARGVFEDLSPPHRPPFTGGLSPIPLPDMT
                     PDERRAMARLGALEAMQSGTTLALEDGNDVDDYAGALSDSGLRWLLSERAYDRVGTSI
                     GDPAPYRLDRALGQKHLRIIEDTFHKWNGTAEGRVRVAASAWAPDMCSPELLRDLRAL
                     QQRLDTWATIHLNQIWGEVAA"
BASE COUNT          297 a          552 c          498 g          249 t
ORIGIN      
        1 tggtggcgcc agggcatgat gggcggcgcc aaggcacatt acgacggcgt cgtcgccttc
       61 tcgcagaccg atttcaccga cgacctgaag aagatcaccg tgccggtgct ggtgatgcat
      121 ggcgacgacg atcagatcgt gccctacgcc gattcggggc ccttgtcggc caagctgctc
      181 aaggctggca cgctcaagac ctacaaggga ttcccgcacg gcatgccgac caccgaggcg
      241 gacacgatca acgccgacct tttagccttc atcaagggct gaaatacctc actgcgcgcg
      301 ctgaagccga aaacctcggc gcgcgcagga cactatgcga ctaagcgtgc tcggcgacta
      361 aacgtactcg ggcaccgccg gggtgacgct gacgtcggcc acgccgggct tttcggcgaa
      421 gcccacgatc acggccgtga ggccgcggtc gagcttctgc agcaagactt ccgttccgtt
      481 ggaaaatctc accgcgtcct tgtagagacc gccgtcgatg cgagtcatca cgacttgctc
      541 gacggcgccg acgccgtagg cctgctgggt gctctcgcca aggccttcca cgagcaggtg
      601 ggtggcctcc ggaacgcaca cggccaggtc acagctcgga ccggtcgcga accccatgga
      661 gccgcttgga aaacgctcga gggtgagctt ctctccttcc gcggcaggtc gcgaacgata
      721 cgcttctaac gaataatcac acatgaacga cctccttgag ttaggatttc gactttcgcg
      781 tagtacgaac aggcgcggcc aaggccacgt ctgcccatgg aaagtgtacg caagaaccac
      841 accattttta attcgccgca ggcgcgccgc gggggacgct ttggccaccg ttatccacaa
      901 cgccgcgatc gtcaccgtcg acgatcgcga caccgtccac tacgacgccg cgattgccat
      961 tgaacgcgat cgcatcgcgg cgatcggttc gagcgccgac ctgctggcgc gctaccccgc
     1021 cgccgagcgg cttgacggcc ggggcaagat ggtcatgccg ggcttcgcca acgtccacac
     1081 gcacctcacc atgacgctgg cacgcggcgt gttcgaggac ctctcgccgc cgcaccggcc
     1141 gcccttcacc ggcggcctct cgccgatccc attgcccgac atgacgcccg acgaacggcg
     1201 cgcaatggcg cgactgggcg cgctcgaggc gatgcagagc ggcaccacgc tggcgctcga
     1261 ggacggcaac gacgtcgacg actatgccgg cgcgctcagc gacagcggcc tgcgctggct
     1321 gctcagcgaa cgggcatacg atcgcgtcgg cacctcgatc ggcgatccgg cgccctacag
     1381 gctcgatcgc gcgctggggc aaaagcacct caggatcatc gaggacacgt ttcacaagtg
     1441 gaacggcacg gcggaagggc gcgtccgcgt cgccgcctcg gcgtgggcgc ccgacatgtg
     1501 ctcgcccgag ctgctgcgcg acctgcgcgc cctgcagcag cggctcgaca cctgggcgac
     1561 catccatctc aaccagatct ggggcgaggt cgcggc
//
LOCUS       DASWGA010000718         5544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_454209, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000718 DASWGA010000000
VERSION     DASWGA010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5544
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454209"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1522)
                     /locus_tag="VF991_16765"
     CDS             complement(149..1522)
                     /locus_tag="VF991_16765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX9558149.1"
                     /translation="MAFLAVPVGITAWSQDKADPKAAGSDKSELYQQLNLFGDVLERV
                     RRDYVEPVDEKTLIENAINGMLAALDPHSSYMNPKTYKDMQIQTKGEFGGLGIEVTME
                     SGVIKVVSPIDDTPASKAGLQSGDLIFALDGEPVQGLTLQEAVEKMRGKVGSSIKISV
                     RRAGKDPFDVSLTREMIKVKSVRYRLEGGDIGYIRVTSFTEQSTSGVLDAVEKLKKEA
                     GNKLKGYILDLRNNPGGLLDQAIAMSDAFLDKGEIVSVKARKSEDVQRWNAKPGDVAN
                     GLPIVVLVNGGSASASEIVAGALQDHRRAIVLGTRSFGKGSVQTIMQVTGGGAIRLTT
                     ALYFTPSGRSIQKEGIKPDIEVEPAKIENLQARAGFREENLRRSILNPNEKPADAKPP
                     ADKPADAKPEAAKPGDKKEDKPAATGAPTPSGDPDEPPKDAVADYQLLRAADLIRGIS
                     LYSSRAN"
     gene            complement(1701..3296)
                     /gene="gpmI"
                     /locus_tag="VF991_16770"
     CDS             complement(1701..3296)
                     /gene="gpmI"
                     /locus_tag="VF991_16770"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005101494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEX9558150.1"
                     /translation="MASASRPRPAVLCVLDGWGHRPDPRYNAILDARTPNYDRLIATC
                     PQGLIDASETFVGLPKGQMGNSEVGHMNLGAGRVAVPDLPRIDQAIADGSLANNPVLA
                     ELVAPLKKTGGACHLMGLASPGGVHAHQDHLVALANHIAGAGVAVWIHAFLDGRDMPP
                     RSAHECLDHIKAGLKAGLPIRFATVAGRYYPMDRDKRWERVALGYDAMVDAKGEHAKT
                     PAEAVDKGYAAGLDDEFVLPTVIDGYTGMKDGDGVLMFNYRSDRARQILTALLDPRFD
                     GFNRARVIRFATAVGMVEYSAALKPFLKALFPPETIRMGLGETVAKAGLKQLRIAETE
                     KYAHVTFFFNGGEERQFDGEDRILVPSPKVRTYDLKPEMSAPEVTDKLVEAIGSGKYD
                     LIVVNYANSDMVGHTGNLAAAVKAVEAVDACLGRLMEAIKKAGGVLLVTADHGNAEQM
                     YDETTHQKHTQHTLNRVPALLFNAPAIIHSLVDGKLADIAPTMLDLMHLPQPREMTGR
                     TLLSETSRPAVLAAPHASAAASA"
     gene            complement(3296..3907)
                     /locus_tag="VF991_16775"
     CDS             complement(3296..3907)
                     /locus_tag="VF991_16775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558151.1"
                     /translation="MHALPRRLLAALTILALTAASGLVLAQALPTEKLADKPAVKPVR
                     SIPYVSITGDDGRQRHYETNAIPLLFNRACFGWRMYLGGPNRVVSLKEVLTTSQPAEQ
                     VIAGPETEVNADKTRATTRMFETVQDGILQRSWCIIPGDPPGTYTYDITIDGEPRGEF
                     VFCAIEVPDQNPNTDPRDLSCPNKFNSVERDNQRSGPRSQRAS"
     gene            complement(3962..4420)
                     /gene="rlmH"
                     /locus_tag="VF991_16780"
     CDS             complement(3962..4420)
                     /gene="rlmH"
                     /locus_tag="VF991_16780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEX9558152.1"
                     /translation="MKLTIACIGRANRGPERDLYEHYTGRIRWPLALRELEEKRKLPA
                     AQLILREGELLLESVPAKSVLVALDRRGKVLDSEGFARRLERWRDDSVNDVAFLIGGA
                     DGHGEPLLKKAALILSFGAMTWPHLLARAMLAEQIYRAQQLLAGHPYHRA"
     gene            complement(4417..5493)
                     /locus_tag="VF991_16785"
     CDS             complement(4417..5493)
                     /locus_tag="VF991_16785"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:NF000843.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEX9558153.1"
                     /translation="MTSTVHPMPGVPRDTARRIGLLGGSFNPAHEGHRHVSLEALKRL
                     GLDEVWWLVSPQNPLKADDGMEPLATRLARARQLGRHSRIRVETPELVLGTRFTLDTV
                     RALRRAYPKARFVWLMGADILPQLVDWQGWRELFAAIPIAAFARPGWSYPALASAAPR
                     AFARYRIDAEAARALASCEPPAWCFIPSRLDSHSATAIRAVRPRRIKAKGKTISDQSS
                     PGRGRMLPDRTKDADALLALVRRSLDDDKAEDVVVIDLKGKSAFADYMVIASGRSNRQ
                     VVAIADHLAEKLKQAGHGYIPIEGKQGGDWVLVDAGDVVVHVFRPEPRAFYALEKMWA
                     LEMEAAAKPRAAARARPRRIKKPA"
BASE COUNT          843 a         1815 c         1915 g          971 t
ORIGIN      
        1 tcttgttttg gagaacggct ggctcagccg ggcgcggcgt ctcgcctttg acaccgacaa
       61 tgagggtcgc accgcccgcg accaagcaga cgacgagcaa ggacgcggct atcagtccgc
      121 cgcgtcctcg catatcgcgt cccgcgcctt agttggcgcg gctgctgtag agcgagatgc
      181 cgcggatcag atcagcggca cgcagcagct ggtagtcggc cacggcgtcc ttgggcggct
      241 cgtccggatc gcccgacggc gtcggggcgc cggtcgccgc cggcttgtct tccttcttgt
      301 cgcccggctt ggcggcttcc ggtttcgcgt cggccggctt gtcggcgggc ggcttggcgt
      361 cggccggctt ctcgttcgga ttgaggatcg agcggcgcag gttctcctcg cggaagccgg
      421 cgcgcgcctg caggttctcg atcttggcag gctcgacctc gatgtcgggc ttgatgcctt
      481 ccttctggat cgagcggccc gacggcgtga agtagagcgc cgtggtcagg cgaatggcgc
      541 cgcccccggt tacctgcatg atggtctgca ccgagccctt gccgaacgag cgggtgccga
      601 gaacgatcgc gcggcggtgg tcctgcagcg cgccggccac gatctccgag gccgaggccg
      661 aaccgccatt caccagcacg acgatcggca ggccgttggc gacgtcgccc ggcttggcgt
      721 tccagcgctg tacgtcctcg ctcttgcgcg ccttgaccga gacgatctcg cccttgtcga
      781 ggaaggcatc ggacatggcg atcgcctggt cgagcaggcc gcccggatta ttgcgcaggt
      841 cgaggatgta gcccttgagc ttgttgccgg cttccttctt cagcttctcg accgcgtcga
      901 gcacgcccga ggtgctctgc tcggtgaagg aggtgacgcg gatatagccg atgtcgccgc
      961 cctccaggcg gtagcgcacc gacttcacct tgatcatctc gcgcgtcagc gaaacgtcga
     1021 acggatcctt gccggcgcgg cgcaccgaga tcttgatcga gctgccgacc ttgccgcgca
     1081 tcttctcgac cgcctcctgc agggtcaggc cctgcacggg ctcgccgtcg agcgcgaaga
     1141 tcaggtcgcc ggactgcagg ccggccttgg aggcgggcgt gtcgtcgatc ggcgacacca
     1201 ccttgatgac gccgctctcc atcgtgacct cgatgccgag tccgccgaac tcgcccttgg
     1261 tctggatctg catgtccttg taggtcttgg ggttcatgta gctcgagtgc gggtcgagcg
     1321 cggccagcat gccgttgatg gcgttctcga tcagggtctt ctcgtcgacc ggttcgacat
     1381 agtcgcggcg gacgcgctcc agcacgtcgc cgaacaggtt gagctgctgg tagagctcgc
     1441 tcttgtcgct gccggcggcc ttgggatcgg ccttgtcctg cgaccaggcg gttatgccca
     1501 ccggaacggc caggaaagcc atgatcgcgg cgacggaggc gatgcgtaaa cgggtcattg
     1561 gggtgccttc acggagggtg cgccggaccg tcagtggccg gcgagtcggg ttttcgggcg
     1621 gtcggcggaa gatacaggag cctctttggc aggatcaagg cgaggtcggc tccccgcgct
     1681 cgcaatgtag ggcttcacag tcaggccgaa gcggcggccg aggcatgcgg cgcggcgagc
     1741 acggccggcc gggaagtctc ggaaagcagc gtacggccgg tcatttcccg gggctgcggc
     1801 aggtgcatca agtcgagcat cgtgggagcg atgtcggcca gcttgccgtc gaccagcgag
     1861 tggatgatgg ccggagcgtt gaacaacagc gccggcacgc gattcaacgt gtgctgggtg
     1921 tgcttctggt gcgtcgtctc gtcgtacatc tgctcggcat taccatggtc tgccgtgacc
     1981 agcagcacgc cgcccgcctt cttgatcgcc tccatcagcc ggcccagaca ggcgtcgacc
     2041 gcctccaccg ccttcacggc ggctgcaagg ttgccggtgt gaccgaccat gtcgctgttg
     2101 gcgtagttca ccacgatcag gtcgtacttg cccgagccga tcgcctcgac gagcttgtcg
     2161 gtcacttccg gcgcgctcat ctcgggtttc agatcgtagg tcctgacctt gggcgagggc
     2221 accaggatgc gatcctcgcc gtcgaactgg cgctcctcgc cgccattgaa gaagaacgtg
     2281 acgtgcgcgt atttctccgt ctcggcgatg cgcaactgct tcagcccggc cttcgccacg
     2341 gtctcgccca gccccatcct gatggtctcg ggcggaaaca gcgccttgag gaacggtttg
     2401 agcgcggccg agtactcgac catgccgacc gcggtcgcga acctgatgac gcgggcgcgg
     2461 ttgaagccgt cgaacctggg gtcgagcaac gccgtcagga tctggcgcgc acggtccgag
     2521 cgatagttga acatcagcac gccgtcgccg tccttcatgc ccgtgtagcc gtcgatcacg
     2581 gtcggcagca cgaactcatc gtcgagacct gcggcgtaac ccttgtccac ggcctcggcc
     2641 ggcgtcttgg catgctcgcc tttggcgtcg accatggcgt cgtagcccag cgccacgcgc
     2701 tcccatcgct tgtcgcgatc catgggatag tagcggccgg cgaccgtcgc gaagcggatc
     2761 ggcaggcccg ccttcagccc ggccttgata tggtccaggc actcatgcgc gctgcgcggc
     2821 ggcatgtccc ggccgtcgag gaaggcgtgg atccagaccg ccacgccagc gcccgcgatg
     2881 tggttggcca gcgccacgag atggtcctgg tgggcgtgga cgccgcccgg cgaggcgagt
     2941 cccatcaagt ggcaggcgcc accggtcttt ttcagcgggg cgaccagctc ggccagaacc
     3001 gggttgttgg ccagcgagcc gtcggcgatc gcctggtcga tgcgcggcag gtcgggcacg
     3061 gcgacccggc cggcgccgag attcatgtgg ccgacctcgg aattgcccat ctggcccttg
     3121 ggcaggccga cgaaggtctc cgatgcatcg atcaagccct gcgggcaggt cgcgatcagc
     3181 cggtcgtaat tgggcgtgcg cgcatcgagg atggcgttgt aacgcgggtc gggacgatgg
     3241 ccccaaccgt cgagaacgca cagcacggcc ggacgcggac gcgatgccga cgccatcagg
     3301 acgcccgctg cgagcgcggc ccggagcgct gattgtcgcg ttcgactgag ttgaacttgt
     3361 tggggcagga aaggtcgcgc ggatcggtgt tggggttctg gtcgggcacc tcgatggcgc
     3421 agaacacgaa ctcgccgcgc ggctccccgt cgatcgtgat gtcgtaggtg taggtacccg
     3481 gcggatcgcc cgggatgatg caccacgagc gctgcaggat gccgtcctgc accgtctcga
     3541 acatgcgcgt cgtagcccgc gtcttgtcgg cgttgacctc ggtctcgggg ccggcgatca
     3601 cctgctcggc cggctgcgag gtcgtcagca cctctttcag cgacaccacg cggttgggtc
     3661 cgccgagata catccgccag ccgaagcagg cgcggttgaa cagcaggggg atggcgttgg
     3721 tttcgtagtg ccgctggcgg ccatcgtcgc cggtgatcga cacataggga atgctgcgca
     3781 ccggcttgac cgccggcttg tcggccagtt tctccgtcgg cagggcctgg gccaggacca
     3841 gtccggaggc agccgtgagc gcaagaatgg tgagggcagc cagaaggcgc cgggggaggg
     3901 cgtgcatggg tgcaatgtag ccccggtttt tcgtcagaac agaggcaaaa tcgacatcat
     3961 ttcacgcccg atggtaaggg tgtccggcca aaagctgctg cgcgcgataa atctgctcgg
     4021 ccagcatggc gcgggccagc aggtggggcc aggtcatggc gccaaatgac aggatcagtg
     4081 ccgctttttt caacagcggt tcgccatgcc cgtcggcgcc gccgatgagg aaagccacat
     4141 cgttcaccga atcgtcacgc cagcgttcca gccggcgggc gaagccctcg ctgtccagca
     4201 ccttgccgcg gcgatcgagc gccactagca ccgatttggc cggcaccgat tcgagcagca
     4261 actcgccttc gcgcaggatc agttgcgcgg cgggcagctt gcgcttctcc tcgagctcac
     4321 gcagcgccaa cggccagcgg atgcgcccgg tgtaatgttc gtaaagatcg cgttcgggtc
     4381 cccggttggc gcggccgatg caggcgatcg tgagcttcac gccggcttct tgatgcgccg
     4441 cggccgggcg cgcgcggccg cccggggctt ggcggcggcc tccatctcga gcgcccacat
     4501 cttctccagc gcatagaacg cgcgcggctc ggggcggaag acatggacca ccacgtcgcc
     4561 ggcgtcgacc agcacccagt cgccgccctg cttgccctcg atcgggatgt aaccgtggcc
     4621 ggcctgcttg agtttctcgg cgagatggtc ggcgatcgcc accacctggc ggttcgagcg
     4681 gcccgaggcg atcaccatgt agtcggcgaa ggccgatttg cccttgaggt cgatgacgac
     4741 gacgtcctcg gccttgtcgt cgtccagtga acggcgcacc agcgcgagca gcgcgtcggc
     4801 gtccttggtc cggtcgggaa gcattcggcc ccttccgggt gaactctggt cggagatggt
     4861 ctttcctttc gctttgatcc gtcgtggccg cacggcgcgg atcgccgtgg cggagtggct
     4921 gtcgagccgg ctggggatga agcaccaggc cggcggttcg cacgaggcaa gcgcgcgggc
     4981 cgcctcggcg tcaatccgat aacgggcgaa ggcgcgcggg gctgccgagg cgagcgccgg
     5041 gtagctccag cccgggcgcg cgaaagcggc gatcggaatg gcggcaaaca actcgcgcca
     5101 gccctgccag tcgacgagct ggggcaggat gtcggcgccc atcagccaca cgaaccgcgc
     5161 cttgggatag gcccgccgca acgcccgtac cgtatcgagg gtgaagcgcg tgccgagcac
     5221 cagctcgggc gtctcgacgc ggatgcgcga atggcggccg agctgccggg cgcgcgccag
     5281 ccgcgtcgcc aatggttcca tgccgtcgtc ggccttcagc ggattttgcg gcgagaccag
     5341 ccaccacacc tcgtcgagcc cgagccgctt cagcgcttcc aggctgacat gacgatggcc
     5401 ctcatgcgcc gggttgaacg agccgccgag caggccgatc cgccgcgccg tgtcgcgcgg
     5461 cacccccggc atcggatgga ccgtagaggt cacctagccc caggctcctg tgtcatcctg
     5521 agcgaagcga aggatctcat ggcg
//
LOCUS       DASWGA010000719         1726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1982687, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000719 DASWGA010000000
VERSION     DASWGA010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1982687"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..309)
                     /locus_tag="VF991_16790"
     CDS             complement(145..309)
                     /locus_tag="VF991_16790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558154.1"
                     /translation="MIGRRQASLAALAASLPAKARAQAAWPTRPIRLIVPYGPGGSAD
                     QVARASMASG"
     gene            367..>1726
                     /gene="hutH"
                     /locus_tag="VF991_16795"
     CDS             367..>1726
                     /gene="hutH"
                     /locus_tag="VF991_16795"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HEX9558155.1"
                     /translation="MTRENGSVLLAPGAVPLAAWRDIYRGAAVSLEPASYAVIDASAR
                     AVSAILARGEPVYGINTGFGKLASVRIDTADLATLQRNIVLSHAAGVGPPMPVAIARL
                     MIALKLASLGQGASGVRRETVHLLEALLARGLTPVVPCQGSVGASGDLAPLAHMAAAL
                     IGVGAVFVDGAEVPAERALAQAGLSPLVLGAKEGLALLNGTQFSTAYALAALFETENL
                     YRSALITGALSTDAARGSDAPFDPRIHHLRRHAGQIEAAQALRRLMAGSAIRASHLVG
                     DERVQDPYCLRCQPQVMGAVLDILRQAATTLATEANGVTDNPLIFADTSEALSGGNFH
                     AEPVAFAADVIALAICEIGSLAERRIAMLVDSNLSGLPAFLTPNPGLNSGFMIAQVTA
                     AALTAENKQRAHPASVDSIPTSANQEDHVSMAAHGARRLVEMAENCRFIVAIELLAAA
                     QGC"
BASE COUNT          244 a          608 c          589 g          285 t
ORIGIN      
        1 ttgatatcca gctcttttag cagcgcggcg aagaagatct tgtcctcggc gacctggcgc
       61 gcgaattcgg ccggcggctg gtgctgggcg tactgcgccc caaccttgcc ggccttggcg
      121 tagggcacat gccggcggcc acggtcagcc gctcgccata gaggcgcgcg ccacctggtc
      181 ggccgagccg cccggcccgt agggcacgat caggcggatc ggacgggtgg gccaggcggc
      241 ttgcgcgcgc gcttttgccg gcagcgacgc ggcaagcgcc gccaagctcg cctgacgacg
      301 gccgatcatg cgtttcctcc gcttttccct ggcgaaagga tagggcgaga cggctaccat
      361 tgcgagatga caagggagaa tggatcggtc ctgctcgcgc cgggcgccgt gccgctggcc
      421 gcgtggcgtg acatctatcg cggcgcggcg gtctccctcg agcctgcgag ctatgccgtg
      481 atcgacgcgt cggcgcgggc ggtctcggcc atccttgccc gcggcgaacc ggtctacggc
      541 atcaacaccg gattcggcaa actcgccagc gtgcgcatcg atacagccga tctggcaacc
      601 cttcagcgca acatcgtgct gtcgcatgcc gcgggcgtcg gcccgccgat gccggtcgcg
      661 atcgcgcggc tcatgatcgc gctgaagctg gccagcctcg gccagggcgc gtcgggcgtg
      721 cgccgcgaga ccgtgcacct gctggaggcc ttgctggcgc gcggattgac gccggtggtg
      781 ccctgccagg gatcagtcgg cgcctccggc gacctggcgc cgctggcgca tatggcggcg
      841 gcgctgatcg gcgtcggcgc cgtcttcgtc gatggcgccg aggtgccggc cgagcgcgca
      901 cttgcccaag ctggtctgtc gccgctggtg ctcggcgcca aggaaggcct cgccctgctg
      961 aatggcacgc aattctcgac cgcctatgcc ctggcggccc tgttcgagac ggaaaatctc
     1021 taccgttcgg cgctgatcac cggcgcgttg tcgaccgatg cggcgcgcgg ctcggacgcc
     1081 ccgttcgatc cccgcatcca ccatctgcgg cgccatgccg gccagatcga ggcggcccaa
     1141 gcgctgcgtc ggctgatggc gggatccgcc atccgcgctt cccatctggt cggcgatgaa
     1201 cgcgtgcagg atccctactg cctgcgctgc cagccgcagg tcatgggcgc ggtcctcgat
     1261 atcctgcgcc aggccgcgac gacgctggcg accgaagcca atggcgtgac cgacaacccg
     1321 ctgatcttcg ccgacaccag cgaggcattg tcgggtggaa acttccatgc cgagccggtc
     1381 gcttttgccg ccgacgtcat cgcgctcgcc atctgcgaga tcggctcgct ggccgagcgg
     1441 cgcatcgcca tgctggtcga ttccaacctg tcgggcctgc ccgccttcct gacgcccaat
     1501 cccgggctga attccgggtt catgatcgcc caggtcacgg ccgccgcgct gacggccgag
     1561 aacaagcagc gcgcccatcc ggccagcgtc gattcgatcc cgacctcggc caaccaggaa
     1621 gatcacgtgt cgatggccgc acacggcgcg cggcggctgg tcgagatggc cgaaaactgc
     1681 cggttcatcg tcgccatcga gcttttggcg gcggcgcagg gttgcg
//
LOCUS       DASWGA010000720         3420 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1611063, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000720 DASWGA010000000
VERSION     DASWGA010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1611063"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VF991_16800"
     CDS             complement(<1..548)
                     /locus_tag="VF991_16800"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /protein_id="HEX9558156.1"
                     /translation="MLDPEARTLLDLMDKAVQDGRPKLHTLPYAVGRKAVDKMSEDSE
                     AEPLAVGEIDDGAFAGPGGEIRFRHYTPFNAAEGPLPTLIYYHGGGFVIGNIETHDST
                     CRRLSNKSHCQVISIDYRLSPEHPFPAPIEDGVAAFRHIRDNAAAFSADARRLAVGGD
                     SAGGAIAAVVAQACRDAGDKGPA"
     gene            complement(583..1398)
                     /locus_tag="VF991_16805"
     CDS             complement(583..1398)
                     /locus_tag="VF991_16805"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9558157.1"
                     /translation="MARQIERGLAKTFAGHIHWRACGPRSNGGPVVMVSHINQQSSAL
                     MIELLQALGQHFLAVAIDYPSHGHSDHIDWQPAIEDYARCVVDVMDALGIARAAALGE
                     AVGAAVSIALAGLWPGRIDKAVLINTPYFSDAETAKSDIADIAKVRPSDATGFPAPRT
                     IEFLLKEDPAHAPIAPTQSWMDRINTAQVEIGRDRWQAMQALAKFDTLAGMAALRCPV
                     LMLYGEHFIYGRHRALLQSKCPQAQVEIVPGGRFCMSWERASEIADHARAFLT"
     gene            complement(1402..2370)
                     /locus_tag="VF991_16810"
     CDS             complement(1402..2370)
                     /locus_tag="VF991_16810"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9558158.1"
                     /translation="MSITRRAAVAGLAALPLAQARAQAFPSKPLTLVVPFPAGGPADI
                     FGRNLAERMSPGLGQPVLVENKSGAAGVTGIDFVAKAGSDAHVMGLMSASAGAIMQSL
                     MPKMPYDPTKDLAPQVLVVRVQEVLAINAKLGIGDLQSFIAHAKANPGKITCGSAGTG
                     GITHLAIELFKRETGTELLHVPYRGAAPATNDLLAGTVDTVLLDISILLPHVRSGAVK
                     VLAVTSDSRAPLLPDVPTMREMGFPKVNSDNWYALVSPGAASPEARKKIFDAASAALK
                     TKELADAYAAVGGVVGGGTSDEVKTFLAAEVAKWAAVIKGSNIKLE"
     gene            complement(2496..3152)
                     /locus_tag="VF991_16815"
     CDS             complement(2496..3152)
                     /locus_tag="VF991_16815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007595595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9558159.1"
                     /translation="MAEASLTVSSKNYSSWSLRGFLLCRMAGLEFAERVAPSDDPATR
                     AELLLLSPSFLVPCLEHGKVKVWDTLAIAEYLNEIRPEAGLWPANPVARAHCRAVCGE
                     MHSGFANLRSALPMNLKAHHPGFKVWAGAQADIERVTAIWRDCLQRYGGPYLFGKTAT
                     VADAMYAPVCSRFATYDVKLDAASAAYRDLMMKFPAMLDWTAAAKSEPEEVEELDVEF
                     "
     gene            3190..>3420
                     /locus_tag="VF991_16820"
     CDS             3190..>3420
                     /locus_tag="VF991_16820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HEX9558160.1"
                     /translation="MLYALYQTAADLMLPMRAWATATGQALGVGGGSQPESWRAAGAL
                     CEMVSRVRLSHRRPSFGIAEVKSGNRLVPVREE"
BASE COUNT          538 a         1149 c         1173 g          560 t
ORIGIN      
        1 gctggaccct tgtcgccggc atcgcggcag gcttgggcca ccaccgcggc gatggcgccg
       61 cccgccgaat cgccgccgac ggccaggcgc ctcgcatcgg cgctgaaggc ggcggcgttg
      121 tcgcggatat ggcggaacgc cgccacgccg tcctcgatcg gcgccgggaa gggatgctcg
      181 ggcgacaggc gatagtcgat cgagatcacc tggcaatggc tcttgttgct aagccgccgg
      241 caggtcgaat cgtgggtctc gatgttgccg atcacgaagc ccccgccgtg atagtagatc
      301 agcgtcggca gcggcccctc ggcggcgttg aacggtgtgt aatggcggaa acggatctcg
      361 ccgcccggcc cggcgaaggc gccatcgtcg atctcgccca ccgccagcgg ctcggcctcg
      421 ctgtcctccg acatcttgtc gaccgccttg cggccgaccg catagggcag cgtgtgcagc
      481 ttgggccgcc catcctggac ggccttgtcc atcaggtcga gcagcgtgcg ggcttccggg
      541 tcgagcatcg tgtcctccct taccgtcgtc ccgacgaatg tctcacgtca ggaacgcgcg
      601 cgcatggtca gcgatctcgc tcgcgcgctc ccagctcatg cagaagcggc cgccaggcac
      661 gatctcgacc tgcgcctgcg ggcatttcga ctgcagcagc gcgcgatgcc ggccgtagat
      721 gaaatgctcg ccatagagca tcagcacggg gcatctgagc gcggccatgc cggccagcgt
      781 gtcgaacttg gccagcgcct gcatcgcctg ccagcggtcg cggccgatct cgacctgggc
      841 ggtgttgatg cggtccatcc acgactgcgt cggcgcgatc ggcgcatgcg cgggatcctc
      901 tttaagcagg aactcgatcg tgcgcggcgc cggaaagccg gtggcatcgc tcggccgcac
      961 cttggcgata tcggcgatgt cgcttttggc cgtctcggca tcgctgaagt agggcgtgtt
     1021 gatcagcacc gccttgtcga tgcgcccagg ccagagcccg gccagcgcga tcgacaccgc
     1081 cgcccccacc gcttcgccca gcgccgcggc gcgcgcgatg cccagcgcat ccatcacatc
     1141 gacgacacag cgcgcgtaat cctcgatggc cggctgccag tcgatatggt cggaatggcc
     1201 gtggctcgga tagtcgatgg cgacggcgag gaagtgctgg cccagtgcct gcagcagctc
     1261 gatcatcagg gccgagctct gctggttgat gtggctcacc atcacgaccg gccccccatt
     1321 ggagcggggc ccgcaggccc gccagtgaat gtgcccggcg aaggtcttgg ccaggccgcg
     1381 ctcgatttgc cgggccacga cctactcgag cttgatgttg gagcccttga tgacggcggc
     1441 ccacttggcg acttccgcgg ccaggaaggt tttcacctcg tccgacgtgc cgccgcccac
     1501 gacgccgccg acggcggcat aggcatcggc aagctccttc gtcttgagcg cggcgctggc
     1561 ggcatcgaag atcttcttgc gcgcctcggg gctcgccgca cccggcgaga ccagggcata
     1621 ccagttgtcg gaattgacct tggggaagcc catttcgcgc atggtcggca cgtcgggcag
     1681 cagcggcgcg cggctgtcgg aggtcacggc cagcaccttg acggcgcccg agcggacatg
     1741 cggcagcagg atcgaaatgt cgagcagcac cgtgtccacc gtgccggcca gcaggtcgtt
     1801 ggtcgcgggt gcggcgccgc gatagggcac gtgcaggagc tcggtaccgg tctcgcgctt
     1861 aaagagctcg atcgccagat gggtgatgcc gccggtaccg gccgagccgc aagtgatctt
     1921 gccgggattg gccttggcgt gggcgatgaa gctttggagg tcgccgatgc cgagcttggc
     1981 gttgatggcg agcacctcct gcacgcgcac caccagcact tgcggcgcca ggtccttggt
     2041 cgggtcgtag ggcatcttgg gcatcaggct ctgcatgatg gcgccggccg acgcgctcat
     2101 caggcccatg acgtgcgcat cgctgccggc cttggcgacg aagtcgatgc cggtgacacc
     2161 ggccgcgccg ctcttgttct cgaccagcac cggctggcca agcccgggcg acatgcgctc
     2221 ggcgagattg cggccgaaaa tatcggccgg cccgccggcc gggaagggca cgacaagggt
     2281 gagcggcttg ctgggaaagg cttgggcgcg ggcttgcgcc aggggcaggg cagcgagacc
     2341 ggcaacggcc gcgcgacgcg taatactcaa tatctcctcc cgatcgttgc gccgactgtg
     2401 cgcaaggacc ggaatggagg caagacctct tccggaccgc gagcgtcccg ctcgctcatg
     2461 atttgagcga gcgggacgct cgcggtccgc ttgactcaga attcgacgtc gagctcctcg
     2521 acttcctcgg gttcgctctt ggccgccgcc gtccagtcga gcatcgccgg gaatttcatc
     2581 atcaggtcgc ggtaggcggc cgaggcggca tcgagcttca cgtcataggt ggcaaagcgc
     2641 gagcacactg gcgcatacat ggcgtcggcg acggtcgccg tcttgccgaa cagatagggc
     2701 ccgccatagc gctgcaggca gtcgcgccag atcgccgtca cccgctcgat gtcggcctgc
     2761 gcgccggccc acaccttgaa gcccggatga tgcgccttga ggttcatcgg cagggccgag
     2821 cgcaggttgg cgaagcccga atgcatctcg ccgcaaaccg cccggcaatg ggcgcgcgcc
     2881 accggattgg ccggccaaag gcccgcctct ggcctgattt cgttcagata ctcggcgatc
     2941 gccagggtgt cccacacctt caccttgccg tgctccaggc agggcaccag gaacgacggc
     3001 gacagcagca aaagctcggc ccgggtggcc ggatcgtcgc tcggtgccac ccgctctgcg
     3061 aattccagcc cggccatccg gcagagcagg aagccgcgca gcgaccaaga ggaatagttc
     3121 ttgctactga cggtgagcga agcctcggcc atgcgttcga ggatgcaatt tccgagccgg
     3181 tcgcccttta tgctctatgc gctttatcag accgccgccg acctgatgct gccgatgcgg
     3241 gcgtgggcga cggcgaccgg ccaggccttg ggcgttggcg gcggctcgca gcccgaaagc
     3301 tggcgggccg ccggcgcgct ctgcgagatg gtgagccggg tcaggctgag ccaccgccgg
     3361 ccgtccttcg gcatcgctga ggtcaagagc ggcaaccggc tggtgccggt gcgcgaggag
//
LOCUS       DASWGA010000721         6921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1853558, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000721 DASWGA010000000
VERSION     DASWGA010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6921
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1853558"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..671
                     /locus_tag="VF991_16825"
     CDS             <1..671
                     /locus_tag="VF991_16825"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019994880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEX9558161.1"
                     /translation="DDGKKPSLDTYEVDMDACGPMVLDALIKIKNEIDSSLTFRRSCR
                     EGVCGSCAMNIDGTNTLACIKYISDIKGDIKIYPLPHMPVVRDLVPDLTVPYAQLASI
                     EPWLKSTSQPPTRERLQSPEERAKLDGLWECILCFCCTTSCPSYWWTGERYLGPAILL
                     QAYRWLADSRDEAAGERLDQLEDPFRLYRCHTIMNCTKTCPKSLNPAKAIAEIKKMMV
                     ERTI"
     gene            788..1792
                     /locus_tag="VF991_16830"
     CDS             788..1792
                     /locus_tag="VF991_16830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9558162.1"
                     /translation="MAALSGMAALASMPASAGQTFDAVKAKGFVQCAVNTGLAGFSFS
                     DSQGKWTGLDVDLCRAIAVAMFGDSEKAKFTPTTAQQRFVALQSGEVDVITRNATQTL
                     LRDTSLGFNIAGVNFYDGQGFLVPNKSGIKSAKELNGATICVQPGTTTELNLADYFRK
                     NKMTFKPVLIEKLDELLQAYAAGRCDSYTTDASGLAAVRAGQLAGKGEHTILPERISK
                     EPLGPIVRHGDDQWFDLVKWTLMGMIEAEEMGITSKNVEEMLKSDDPAIKRFLGVTPG
                     YGKAVGVDEKWMYNIIKQIGNYGESFEHNVGVNTPLKLERGQNALWTNGGLMYAIPFR
                     "
     gene            complement(1928..3535)
                     /locus_tag="VF991_16835"
     CDS             complement(1928..3535)
                     /locus_tag="VF991_16835"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9558163.1"
                     /translation="MSKSIGSVALEHRVDALFSRYSQPGSPGAVVAVMRAGAIELCKG
                     YGLASIELGVPIGPKTRFRIASVSKQFTVSAALMLADEGKLELSDPPHKYLRELRPLP
                     VTIDQMMRNSSGLPDFLELLRLGGHGLDKPARPADLLAACLRNGHLNFKPGSRFLYSN
                     SNFLLLGLIIEKVAGKTLGDVLAERIFQPLGMTRTLLAHEIDTVIPGLATGYLGDDQA
                     GFRRAAHAYPQGGEGGLVSTVEDLLIWSRHFDQPTLVPKALPAQLAAAAPLVGGHANK
                     YRRGVQADELRGLATIGHGGLWPGYRTEFLRVPQADLTVVVIANLGSIDPWRQARAIA
                     NLTLERDKRLKPAPLPITEAEIRPLAGTWFNAQEPSLFELAWRNGEATVIQNGLPFGL
                     GRRADGWLAAERGSFEFAIKSGRAGTMRIDLSAGRVLTFKKLGRRKSVPAAIAGTYVS
                     ADSGATWEIKRSGETWAASVSGPLIAGGPAWPVRGIDADAVEIETPGSWMAVTQLAHL
                     VRDRRGRVVALDVSTGRIKKMRFERRD"
     gene            3614..4423
                     /locus_tag="VF991_16840"
     CDS             3614..4423
                     /locus_tag="VF991_16840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX9558164.1"
                     /translation="MQRRFVTIEKGLGPQGRIAVVRFDRGDNINALSQQAMRELRDVP
                     RDFEDDLETSVVILTGTAKAFSAGFDLKDPEGRQRDSLSVGERIHRQRLGPKMCKAWQ
                     DMDQVTIAAIEGHCIGGGAALVVALDFRTCGRSAHFRIPEVELGMNMSWGSIPRILAL
                     IGPARTKQAVILASDRIAAAEALDWGLVETVVDDGQALAAALAFAERIARQPPIPVRM
                     TKSTVNRFAYALADLGAHMDADQNVLTGLTEDYKEGTQAFRDKRKPVFKGR"
     gene            complement(4561..4746)
                     /locus_tag="VF991_16845"
     CDS             complement(4561..4746)
                     /locus_tag="VF991_16845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006935040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HEX9558165.1"
                     /translation="MGDGPPPLRRVMSPCIGICTLDRKSGFCLGCKRTIDEIGRWAML
                     DDPERQAIIDQLPGRKL"
     gene            complement(4750..5403)
                     /gene="phaR"
                     /locus_tag="VF991_16850"
     CDS             complement(4750..5403)
                     /gene="phaR"
                     /locus_tag="VF991_16850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006936650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HEX9558166.1"
                     /translation="MADQAVPEGGPKPAPVVIKKYANRRLYNTATSAYVTLDHLSQMV
                     KDKTDFVVYDAKTGDEITRSVLTQIIFEEESKGGQTLLPIPFLRQLISFYGDSLQGVV
                     PQYLEMSMTQFARNQEQMRRYLQNAFGFNPFQQFESMGKQNMAMFEQAMRMFNPYRPG
                     QGGQGGGQPAGAPPPMTNGQDAPKADATQPVSEAAIDDLKRKLDELQNQLAELSKKS"
     gene            complement(5417..5719)
                     /locus_tag="VF991_16855"
     CDS             complement(5417..5719)
                     /locus_tag="VF991_16855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558167.1"
                     /translation="MSHLDRRGDLRVRGSEETGDLFGQSLVGGEPGELALPEVEIAPG
                     QAIEIGRVVVFRGHSGTIAHRRRNAAFAGAKRALSHCGIGAKVIRRSKPTFMASAR"
     gene            5730..>6921
                     /locus_tag="VF991_16860"
     CDS             5730..>6921
                     /locus_tag="VF991_16860"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9558168.1"
                     /translation="MQPRPLPPRLGPRPLPLHLGTALMTWASSESAWKLWKPASPNSN
                     PGSATPEGIAALLPEIAVLEAKAGAGKFEQALHREIARRLHRLADGVLAYRRHAVHRT
                     LDDPPAVWSEGNTRLLDYGATHRAARVRGARAVLVVPSLINRWEVLDLTAEKSLMRAM
                     AASGLRPYLVDWGTPNAEERRFDSTSYVARLEHALAFLTKRARRAPAVMGYCMGGTLT
                     VALAARQPRRVAGLALLAAPWDFHADRAGHAFLLSAGPLLAEVADRVGELPVDVLQTL
                     FWSLDPWLAVKKFGRFLGMDQQGDHARDFVLLEDWLNDGAPLAGPTARECLVGWYGQN
                     LPGTNKWVVGGRRIVPSKIKKPALVMIPSGGRIVPPLSAASLVDPKRGLKNATRLDLP
                     LGHIG"
BASE COUNT         1165 a         2283 c         2319 g         1154 t
ORIGIN      
        1 cggacgacgg caagaagcct tcgctcgaca cctacgaagt cgacatggat gcctgcggcc
       61 cgatggtttt ggacgcgctg atcaagatca agaacgagat cgacagctcg ctcaccttcc
      121 gccgctcctg tcgcgagggc gtgtgcggct cgtgcgccat gaacatcgac ggcaccaata
      181 cgctcgcttg catcaagtac atttccgaca tcaagggcga catcaagatc tacccgctgc
      241 cgcacatgcc ggtggtgcgc gacctggtgc ccgacctcac cgtgccctac gcccagctcg
      301 cctcgatcga gccgtggctg aaatcgacca gccagccgcc gacccgcgag cgcctgcagt
      361 cgcccgagga gcgcgccaag ctcgacgggc tgtgggagtg catcctgtgc ttctgctgca
      421 cgacctcgtg cccgtcctat tggtggaccg gcgagcgcta tctcggtccc gccatcctgc
      481 tgcaggccta ccgctggctc gccgacagcc gcgacgaggc cgcgggcgag cggctcgacc
      541 agctcgaaga tccgttccgg ctctatcgct gccacaccat catgaactgc accaagacct
      601 gccccaagag cctcaatccg gcgaaggcga tcgccgaaat caagaagatg atggtcgaac
      661 ggacgatttg accacccgtt tcgcggacaa aggcgcgccg gtgaccccgg cgcgcctttt
      721 gctatgctgg ccctgcttaa gacaaagaac agggggctcg acaatgtttc tcaaatctcc
      781 cgccgccatg gcggcgcttt cgggtatggc ggcgttggcg tcgatgccgg cgtcggccgg
      841 ccagaccttt gatgccgtga aggccaaggg cttcgtgcag tgcgcggtca acaccggctt
      901 ggcgggcttt tccttctccg acagccaggg caagtggacg gggctcgacg tcgatctctg
      961 ccgggcgatt gccgtggcga tgttcggcga tagcgaaaag gccaagttca cgccgaccac
     1021 ggcgcagcag cgcttcgtcg ccctgcagtc gggcgaggtc gacgtcatca cgcgtaacgc
     1081 cacccagacc ctgctgcgcg acacctcgct cggcttcaac atcgccggcg tcaacttcta
     1141 cgacggccag ggtttcctgg tgccgaacaa gagtggcatc aagagcgcca aggagctgaa
     1201 tggcgccacc atttgcgtgc agcccggcac gacgaccgag ctcaaccttg cggactattt
     1261 ccgcaagaac aagatgacct tcaagccggt cctgatcgag aagctcgacg agctgctgca
     1321 ggcctatgcg gcgggccgct gcgattccta cacgaccgac gcgtcagggc tcgccgcggt
     1381 gcgggccggc cagctcgccg gcaagggcga gcatacgatc ctgcccgaac gcatctccaa
     1441 ggagccgctc ggccccatcg tgcgccacgg cgacgatcag tggttcgatc tcgtgaaatg
     1501 gacgcttatg ggcatgatcg aggccgagga gatgggcatc acgtcgaaga acgtcgagga
     1561 gatgctgaaa agcgacgatc cggcgatcaa gcgcttcctg ggcgtcacgc cgggctacgg
     1621 caaggcggtc ggcgtcgacg agaagtggat gtacaacatc atcaagcaga tcgggaacta
     1681 cggcgagagc ttcgagcaca atgtcggcgt caacacgccg ctcaagctcg agcgcggcca
     1741 gaatgcgttg tggaccaacg gcggcctgat gtacgcgatc ccgttccgtt aaggcaggtt
     1801 tctcgccggc tagctcatgt tcctctcccc tactaggggg agaggttagg tgagggggcg
     1861 acggcggatg caaaccccct cacccagcct ctccccctat cgggggagag gaggatgaag
     1921 gcttggatta gtctctccgc tcgaaccgca tcttcttgat gcgtccggtc gacacgtcca
     1981 gcgcgacgac gcggccgcgg cgatcgcgca cgagatgggc aagctgggtc accgccatcc
     2041 agctgcccgg cgtctcgatc tcgacggcat cggcgtcgat gccgcgcacc ggccacgccg
     2101 gtccgccggc aatcagcggc ccgctgaccg aggcggccca agtctcgccg ctgcgcttga
     2161 tctcccaggt ggcgcctgaa tcggccgaga cataagtgcc ggcgatcgct gcgggcactg
     2221 atttgcggcg gccgagcttc ttgaaggtga gcacgcggcc ggcgctgaga tcgatccgca
     2281 ttgtcccagc gcggccggac ttgatggcga attcgaacga gccgcgttcg gctgccagcc
     2341 agccatcggc gcggcggccg agcccgaaag gcaagccgtt ctggatcacc gtcgcctcgc
     2401 cgttgcgcca cgccagctcg aatagcgacg gctcctgggc gttgaaccag gtgccggcga
     2461 gcggcctgat ctcggcctcg gtgataggga gcggcgcggg cttcaaccgc ttgtcgcgtt
     2521 cgagcgtcag gttggcgatg gcacgcgcct ggcgccacgg atcgatgctg ccgagattgg
     2581 cgatcaccac gacggtgagg tcggcctgcg gcacgcgcag gaattcggtg cgataacccg
     2641 gccacaggcc gccatggccg atggtggcga gaccgcgcag ttcgtcggcc tgcacgccgc
     2701 ggcgatactt gttggcatgg ccgccgacca gcggtgctgc ggcggcgagc tgcgccggca
     2761 gcgccttggg caccagcgtc ggctggtcga aatgccggct ccagatcaac aggtcctcga
     2821 cggtcgacac caggccgccc tcgccgccct gcggataggc gtgcgcggca cgacggaaac
     2881 ccgcctggtc gtcgccgaga tagcccgtgg cgagacccgg gatcaccgtg tcgatttcgt
     2941 gcgccagcag ggtgcgggtc atgccaagcg gctggaaaat gcgttcggcg agaacgtcgc
     3001 ccagcgtctt gccggcgacc ttctcgatga tcaggccgag cagcaggaag ttgctgttgc
     3061 tgtagagaaa gcggctgccc ggcttgaagt tgagatggcc gttgcgcagg caagccgcca
     3121 gcaggtcggc gggccgcgcc ggcttgtcga gtccgtggcc gcccagccgc agaagttcga
     3181 ggaaatcggg caggccgctg gaattgcgca tcatctggtc gatggtgacg ggcagcggcc
     3241 tgagttcacg cagatacttg tgcggcgggt cggacagctc gagcttgcct tcgtcggcca
     3301 gcatcagcgc ggcgctgacg gtgaactgct tgctgaccga ggcaatgcga aagcgcgtct
     3361 tgggcccgat cgggacgccg agctcgatgc tcgccaggcc atagcccttg cagagctcga
     3421 ttgcgcccgc ccgcatgacg gcgacgacgg cgcccggcga accgggctgg ctatagcggg
     3481 aaaacagcgc gtcgacgcgg tgttcgaggg cgacggatcc gatcgatttc gacatggcat
     3541 gcagtcaagc caagcggctc gcccttgtaa agccgaggcg ctaccttgaa gcgaacacag
     3601 gaggaacgcg cgaatgcagc gccgcttcgt cacgatcgag aagggtctgg gaccgcaggg
     3661 caggatcgcg gtggtgcgtt tcgaccgcgg cgacaacatc aatgcgctca gccagcaggc
     3721 gatgcgcgag ctgcgcgacg tgccgcgcga cttcgaggat gatctcgaaa cctcggtcgt
     3781 gatcctgacc ggcacggcga aagccttctc ggcgggtttc gacctgaagg atccggaagg
     3841 ccgccagcgc gattcgctgt cggtcggtga acgcatccat cgccagcggc tcggtcccaa
     3901 gatgtgcaag gcctggcagg acatggacca ggtcaccatc gccgccatcg agggccattg
     3961 catcggcggc ggcgcagcat tggtcgtggc gctcgacttc cgcacctgcg ggcggtcggc
     4021 gcatttccgc attcccgagg tcgagctcgg catgaacatg agctggggct cgatcccgcg
     4081 catactggcg ctgatcggtc cggcgcgcac caagcaggcg gtcatcctgg cgtccgaccg
     4141 catcgccgcg gccgaggcgc tggactgggg tttggtcgag accgtggtcg acgatggaca
     4201 ggctttggcc gccgccctgg cgttcgccga gcgcatcgcc cgccagccgc cgattccggt
     4261 gcgcatgacc aagagcacgg tcaaccggtt cgcctacgcg ctcgccgacc tcggcgccca
     4321 catggacgcc gaccagaacg tgctgaccgg gctgaccgag gactacaagg aaggaacgca
     4381 ggccttccgt gacaagcgca agccggtgtt caaggggagg taggagcccg tcgtcccgag
     4441 cgaagccgcc cgtagggcgg cgcagccgag ggaccttctc tcgacaacaa ggatcgtcgt
     4501 cgttgaaaga aggtccctcc gcgcggccct tcgggccttg gtcgggacga cggaaaatcg
     4561 ctaaagcttc cggcccggca actggtcgat gatcgcctgg cgctcggggt cgtcgagcat
     4621 ggcccagcgg ccgatctcat cgatggtgcg cttgcagccg aggcagaagc cgcttttgcg
     4681 gtcgagtgtg cagatgccga tgcagggcga catcacgcgg cgcaaaggcg gtggcccgtc
     4741 gcccatgcgt caggacttct tgctgagctc cgcgagctgg ttctgcagct cgtcgagctt
     4801 gcgtttcagg tcgtcgatgg cggcttcgct gacgggctgg gtggcatcgg ccttgggcgc
     4861 atcctgcccg ttggtcatcg gcggcggcgc gccggctggt tggccgccgc cttgccctcc
     4921 ttggccgggg cggtacggat tgaacatgcg catggcctgc tcgaacatcg ccatgttctg
     4981 cttgcccatc gattcgaact gctggaacgg attgaagccg aaggcattct gcaggtagcg
     5041 ccgcatctgc tcctggttgc gcgcgaactg cgtcatcgac atttcgagat attgcggcac
     5101 cacgccctgc aggctgtcgc cgtagaagga gatgagctgg cgcaggaagg ggatcggcag
     5161 cagcgtctgc ccgcccttgc tctcttcctc gaaaatgatc tgcgtcagca ccgagcgggt
     5221 gatttcgtcg ccggtcttgg cgtcgtagac gacgaaatcg gtcttgtcct tcaccatctg
     5281 cgacagatgg tcgagcgtta cgtaggcgga ggtggcggtg ttgtagagcc gccggttcgc
     5341 gtacttcttg atcaccaccg gagcgggctt gggtccaccc tcgggtactg cctggtcggc
     5401 cattacgctt cgctccctag cgcgcggacg ccatgaacgt cggtttactt cggcggatca
     5461 ccttagcgcc gataccgcag tgcgacaagg cgcgctttgc gcctgcgaac gccgcgttcc
     5521 ggcggcgatg ggctatagtg cccgaatggc ccctgaaaac gacgacccgg ccgatttcga
     5581 tcgcctggcc cggcgctatc tcgacctctg gcaaagccag ctcgccgggc tcgccgccga
     5641 ccagggattg accgaacaga tcgcccgtct cttcgctgcc gcgaacacgc aggtcgcctc
     5701 ggcgatcgag atggctcaag gagcacgtca tgcagcctcg cccccttcca ccccgcctgg
     5761 gaccccggcc gctgccgctt cacctgggta cggcgctgat gacgtgggcg agctcagaaa
     5821 gcgcgtggaa gctctggaag cccgcatcgc cgaactcgaa tccaggctcc gcgacgcctg
     5881 agggcatcgc cgcccttctg cccgagattg ccgtcctgga agccaaggcc ggcgcgggca
     5941 aattcgaaca agcgcttcat cgcgagatcg ctcgccggct gcaccggctg gccgacggcg
     6001 tgctggccta tcgccggcat gccgtccacc gcacgctcga cgatccaccg gccgtgtgga
     6061 gcgagggcaa cacgcggctg ctcgattacg gcgccacgca ccgcgccgcc cgcgtacgcg
     6121 gggcgcgggc cgtgctggtg gtgccgtcgc tgatcaatcg ctgggaggtg ctcgacctca
     6181 cggccgagaa gagcctgatg cgcgccatgg cggccagcgg gctcaggccc tacctcgtcg
     6241 attggggaac gcccaatgcc gaggagcggc gtttcgacag cacgtcctat gtggcgcggc
     6301 tcgagcacgc gcttgccttc ctgaccaagc gggcccgccg cgcgcccgcc gtgatgggct
     6361 attgcatggg cggcacgctc accgtggcgc tggcggcacg ccagccgcgc cgggttgccg
     6421 gcctcgccct gctcgccgcg ccctgggact tccatgccga ccgcgccggc cacgctttcc
     6481 tgctctcggc cgggccgctg ctggcggagg tggcggaccg ggtcggcgag ttgccggtcg
     6541 atgtcctaca aaccctgttc tggtcgctcg atccctggct cgcggtgaag aagttcggcc
     6601 gcttcctcgg catggaccag cagggcgacc acgcccgcga cttcgtgctg ctcgaggact
     6661 ggctgaatga cggcgcgccg cttgccggac cgacggcgcg cgaatgcctg gtcggctggt
     6721 acggccagaa cctgcccggg accaacaagt gggtcgtggg gggaaggcgc atcgtgccgt
     6781 cgaagatcaa gaagccggcg ctggtgatga tcccgtcggg cggccgcatc gtgccgccgc
     6841 tgtcggccgc ttccctcgtc gatcccaagc gcggcctcaa gaacgccacg cggctcgatc
     6901 tgccgctcgg ccatatcggc a
//
LOCUS       DASWGA010000722         5662 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1343800, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000722 DASWGA010000000
VERSION     DASWGA010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5662
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1343800"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1838)
                     /gene="gyrB"
                     /locus_tag="VF991_16865"
     CDS             complement(<1..1838)
                     /gene="gyrB"
                     /locus_tag="VF991_16865"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009330 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) complex [Evidence
                     IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEX9558169.1"
                     /translation="MSDNNDVTPGAEAYDADSIRILRGLDAVRKRPGMYIGDTDDGTG
                     LHHMVYEIVDNAIDEALAGYCDRVEVVLQGDGSVTVRDNGRGVPVDIHKEEGISAANV
                     IFTQLHAGGKFDQNSYKVSGGLHGVGAAVVNALSEQLDLHIWRNGKEYFLRFRRGEPE
                     DDLKVMGEAPPGKHGTEVTFLPSTEVFTKTEFDFATLEHRLRELAFLNSGVRVVLTDE
                     RGAEPKVSDLFYEGGVEAFAKYLDRNKQVLHNPPVSISGKKDGVLVEAALQWNDSYHE
                     TMLCFTNNIPQRDGGTHLAGFRGALTRTLNKYADESGLSKKEKVSLTGDDMREGLTCV
                     LSVKVPDPKFSSQTKDKLVSSEVRPVVESVISDKLGQWFEEHPSEARKILTKVVEAAA
                     AREAARKARELTRRKGALDVSSLPGKLADCQERDPALSELFIVEGDSAGGSAKQGRNR
                     ANQAILPLRGKILNVERARFDKMLSSQEIGTLITALGTGIGIDDFDLGKLRYHKIIIM
                     TDADVDGAHIRTLLLTFFYRQMREIIDRGHLFIAQPPLYKAARGKSERYLKDERELEN
                     HLIDEGLKDSVLALSGGERIAGADLAHLLERARVARAALDGFPRHYP"
     gene            complement(1863..3068)
                     /gene="recF"
                     /locus_tag="VF991_16870"
     CDS             complement(1863..3068)
                     /gene="recF"
                     /locus_tag="VF991_16870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HEX9558170.1"
                     /translation="MTAPPNSALAYSPDAATGAAPAILAVRQLRLSDFRNYRQLRLEC
                     GREPVVLVGANGAGKTNLLEALSFLVPGRGLRRARLDEICRRARGEEPDAATWAVAAT
                     LDTPDGRLAIGTGLEPARSEGGLPRRAVRIDGQPAQSQTALGQHVAAVWLTPQLDRLF
                     LDGPGERRRFLDRLVTALHPEHAGAAAAYDNALRQRSRLLADGGRDPHWFTALEDTMA
                     RHGVALAANRADTVHRLDAAARLGIGPFPRAALAMAGEIDGWLATLPALDAEDRLRSE
                     LAASRLRDGESGTTSCGPHRSDLAVRHLDLDLPAAEGSTGQQKALLVSIALAHARLVA
                     LSRGCAPLLLLDEIAAHLDKERRGALFDEVVALGVQSWMTGTDAELFAPLGGRAQILR
                     VADGSIAAA"
     gene            complement(3065..4183)
                     /gene="dnaN"
                     /locus_tag="VF991_16875"
     CDS             complement(3065..4183)
                     /gene="dnaN"
                     /locus_tag="VF991_16875"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEX9558171.1"
                     /translation="MKLTIERAALLKALAHVQSVVERRNTIPILSNVLITAQKGRLSL
                     AATDMDLAITEQVEASAAKTGSTTAPAHTLYEIVRKLPDGAQVELETASDGSTLVIRA
                     GRSRFTLQCLPPADFPAMSEGDLPHRFQLPATDLKGIIDRTRFAISNEETRYYLNGIY
                     FHAAASNATQVLRGVATDGHRLARVEVPLPKGAADIPGIIVPRKTVGEVRKLLDESDG
                     SVDIELSDTRIRFATGNVTLVSKLIDGTFPDYERVIPTGNDKILNVPCKEFAHAVDRV
                     STISTEKSRAIKLAVAKGVVTLSATSPDAGSATEEIEVEYKAAPLEIGFNSRYLLDIT
                     EQITGAEARFLMADAGSPTLVRDGADESALYVLMPMRV"
     gene            complement(4396..>5662)
                     /gene="dnaA"
                     /locus_tag="VF991_16880"
     CDS             complement(4396..>5662)
                     /gene="dnaA"
                     /locus_tag="VF991_16880"
                     /inference="COORDINATES: protein motif:HMM:TIGR00362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEX9558172.1"
                     /translation="LYAPTRFVRDWVARHYGDRVLAYWQAVHAEVGTVEVNLVPPPAP
                     RRPNEIIAVPPVPSSQNYQPPMPRMGPSIGRGGDDLFQGPEARYTFANFVVGKPNEFA
                     YAAARNIAEQDRPLPERNPLYIFGGVGLGKTHLMHAIWHAIRERDPKTRVLYLTAESF
                     VNRFIQALRSKNTGQFKELFRNVDVLMVDDVQFICGKEASQDEFFFTFNSLVEQNKQI
                     VLSSEKPPSELQDIEERMRSRLGSGLVADIHSSTYELRLSILQTKAETARVPVPLAVL
                     EFLAHKISTNIRELEGALNRVVAHGQLIGREITVEMAQDVLHDLLRQADRKVTVDEIQ
                     QRVAAHYNIKLAEMSSPRRARSVARPRQVAMYLAKQLTTLSLPQIGKRFGNRDHTTVM
                     HAVRKIEELKISDLSIAEDVELLKRQLQG"
BASE COUNT          870 a         1829 c         1987 g          976 t
ORIGIN      
        1 ggataatgcc gcggaaagcc gtccagcgcg gcgcgtgcga cacgggcgcg ttcgagcaga
       61 tgcgcaagat cggcgccggc aatgcgttcg ccgccggaaa gcgccagcac gctgtccttc
      121 aggccctcgt cgatgagatg attttcgagc tcgcgctcat ccttgagata gcgctccgac
      181 ttgccgcgcg ctgccttgta gagcggcggc tgcgcgatga agagatggcc gcggtcgatg
      241 atctcgcgca tctgccggta gaagaaggtg agcaggagcg tgcggatgtg ggcgccgtca
      301 acgtccgcgt ccgtcatgat gatgatcttg tgatagcgca gcttgcccag gtcgaaatcg
      361 tcgatgccga tgccggtgcc cagcgccgtg atcagcgtgc cgatctcctg cgatgacagc
      421 atcttgtcga agcgcgcacg ctcgacgttc aggatcttgc cgcgcagcgg caggatcgcc
      481 tggttggcgc ggttgcggcc ctgcttggcc gagccgcccg ccgaatcgcc ctcgacgatg
      541 aacagctcgg aaagcgccgg atcgcgctcc tggcagtcgg cgagcttgcc gggcagcgag
      601 ctcacgtcga gcgcgccctt gcggcgggtg agctcgcgcg ccttgcgggc ggcctcgcgc
      661 gccgcggcgg cctcgaccac cttggtcagg atcttgcggg cctcggacgg atgctcctcg
      721 aaccactggc cgagcttgtc gctgatgacc gattcgacca ccgggcggac ctcggaagaa
      781 accagcttgt ccttggtctg cgaggagaac ttgggatcgg gcaccttgac cgacaacacg
      841 caggtcagcc cctcgcgcat gtcgtcgccg gtgaggctga ccttctcctt cttggacaga
      901 ccgctttcgt cggcgtactt gttcagcgtg cgggtcagcg cgccgcggaa acccgcgaga
      961 tgcgtgccgc cgtcgcgttg cgggatgttg ttggtgaagc acagcatcgt ctcgtgatag
     1021 ctgtcgttcc actgcaaggc ggcttcgacc aggacgccgt cctttttgcc ggagatcgag
     1081 accggcgggt tgtgcagcac ctgcttgttg cggtcgagat acttggcgaa ggcttcgacg
     1141 ccgccctcgt agaacaggtc ggagaccttg ggctcggcgc cgcgctcgtc ggtcagcacg
     1201 acgcgcacgc ccgaattcag gaaggcgagc tcgcgcagcc ggtgttccag ggtggcgaag
     1261 tcgaactcgg tcttggtgaa gacctcggtc gagggcagga acgtcacctc cgtgccgtgc
     1321 ttgcccggcg gcgcctcgcc catgaccttg aggtcatcct ccggttcgcc gcggcggaag
     1381 cgcaggaagt attccttgcc gttgcgccag atgtgcaggt cgagctgctc ggacagcgca
     1441 ttgacgaccg ccgcgccgac gccgtgcagg ccacccgaca ccttgtagga attctggtcg
     1501 aactttccgc cggcatggag ctgggtgaag atcacgttgg cggcggaaat gccctcttcc
     1561 ttgtggatgt cgaccggcac gccgcggcca ttgtcgcgca ccgtgaccga gccgtcgccc
     1621 tgcaggacca cttcgacccg gtcgcagtag ccggccagcg cctcgtcgat cgcgttgtcg
     1681 acgatctcgt agaccatgtg atgcaggccg gtgccgtcgt cggtgtcgcc gatatacatg
     1741 cccggccgtt tgcgcacggc gtccagccca cgcaatatcc tgatcgaatc ggcgtcatag
     1801 gcttcggcgc cgggcgtcac gtcgttgttg tcgctcatgt ctgtggcttc ccggaaaagg
     1861 ttttaggccg ccgcgatcga gccgtcggcc acgcgcagga tttgcgcacg gccgccgagc
     1921 ggcgcaaaga gttcggcatc ggtgccggtc atccagctct gcacaccgag cgccaccacc
     1981 tcgtcgaaca gcgcgccgcg gcgctccttg tcgagatggg cggcgatttc gtcgagcagc
     2041 agcagcggcg cgcagccgcg cgacaaggcc accagacggg catgggccag cgcgatcgac
     2101 accaggaggg ccttctgttg cccggtcgat ccctcggctg ccggcaggtc gagatcgaga
     2161 tggcgcaccg cgagatcgct gcgatgcggc ccgcaggatg tggtgcctga ctcgccgtcg
     2221 cgcaagcggc tggcggccag ttcggagcgc aagcggtcct cggcatcgag cgccggcagg
     2281 gtggcgagcc atccgtcgat ctcgcccgcc atggccagtg ccgcccgcgg gaaggggccg
     2341 atgcccaggc gcgccgcggc atcgagacga tggaccgtgt cggcgcggtt ggcggccagc
     2401 gccacgccgt gccgggccat ggtgtcctcg agcgccgtga accagtgcgg atcgcgcccg
     2461 ccgtcggcca gcaggcggct gcgctggcgc agcgcattgt cgtaggccgc cgcggcgccg
     2521 gcatgctccg gatggagcgc cgtcaccagc cggtcgagga agcgccggcg ctcgcccggc
     2581 ccgtcgagga acaggcggtc gagctgcggc gtcagccaca ccgccgcgac atgctggccg
     2641 agcgccgtct ggctttgcgc cggctggcca tcgatgcgca ctgcccggcg cggcaggccg
     2701 ccctcgctgc gcgccggctc caggccggtg ccgatggcga gccgtccgtc cggcgtgtcg
     2761 agggtggcgg cgaccgccca agtggcggcg tccggttcct cgccgcgcgc gcggcggcag
     2821 atttcatcca gccgcgcccg gcgcaagccg cggcccggca ccaggaagga cagcgcctcc
     2881 agaagattgg tcttgcccgc cccgttagcg ccgaccagca ccacgggctc gcgcccgcac
     2941 tccaggcgaa gctggcgata gttgcggaaa tcgctgaggc ggagctggcg cacggccagg
     3001 atggccggcg cagcgccggt cgcggcgtcg ggggaatagg ctagagcgct gttcggcggc
     3061 gctgtcatac ccgcatcggc atgagcacgt agagcgcgct ctcgtcggcg ccgtcgcgca
     3121 ccagggtggg cgagccggcg tcggccatca ggaagcgcgc ctcggcgccc gtgatctgtt
     3181 cggtgatgtc gagcaggtag cgcgaattga agccgatctc gagcggcgcc gccttgtact
     3241 cgacctcgat ctcctcggtg gcgctgccgg cgtcggggct ggtggccgac agcgtgacca
     3301 cgcctttggc aacggcgagc ttgatggccc gcgacttctc ggtggagatg gtcgagacgc
     3361 ggtcgacggc atgggcgaat tccttgcacg gcacgttcag gatcttgtcg ttgccggtcg
     3421 ggatgacgcg ctcgtagtcg gggaaagtgc cgtcgatcag cttgctgacc agggtgacat
     3481 tgccggtggc gaagcggatg cgggtgtcgg agagctcgat gtcgaccgag ccgtcgctct
     3541 cgtccaacag cttgcgcacc tcgccaaccg tcttgcgcgg cacgattatg ccgggaatat
     3601 ccgccgcgcc cttgggcagc ggcacttcca cccgggcaag ccgatggccg tcggtggcca
     3661 caccgcgcag cacctgggtg gcattggagg cggcggcatg gaaatagatg ccgttcaggt
     3721 agtagcgggt ctcttcgttg gagatggcga accgggtgcg gtcgatgatg cccttgaggt
     3781 cggtcgccgg cagctggaag cggtgcggca ggtcgccctc cgacatcgcc gggaaatcgg
     3841 ccggtggcag gcactgcaag gtaaagcgcg agcggccggc gcggatcacc agcgtgctgc
     3901 cgtcggaagc ggtctccagc tcgacctgcg cgccgtccgg cagcttgcgc acgatctcgt
     3961 aaagtgtatg ggccggcgcc gtggtcgagc cggtcttggc cgcactcgcc tccacctgct
     4021 cggtgatggc gaggtccatg tcggtggcgg cgaggctcag ccgccccttt tgcgcggtga
     4081 tcaggacgtt ggacaggatg gggatcgtgt tgcgccgctc gaccacactc tggacatggg
     4141 ccagcgcctt cagaagggct gcccgttcga tcgtcagttt catggtttgg tcgctgtacc
     4201 ggggggggcc aaaaagcgtt tagacacccc gtttcgcagg tccgaaaaag ccccctgcgg
     4261 aacggttggg gactatagca cgccgggcct agccgggaag cgatttcgct cgaaatatga
     4321 ggctcttaac gcccgaattc ccgagcaaaa aaggggcccg acgggccccc ttccgcttat
     4381 cgtcgcgagg attcgtcagc cctgcaactg gcgcttgagc aactccacgt cctccgcaat
     4441 cgagaggtcg gagatcttga gttcctcgat cttgcgaacg gcatgcatga ccgtggtgtg
     4501 gtcgcggttg ccgaaacgct tgccgatctg cggcaggctc aaggtagtga gctgcttggc
     4561 gagatacatc gccacctggc gcgggcgggc gaccgagcgg gcgcgccgcg gcgagctcat
     4621 ttcggcgagc ttgatgttgt agtgcgccgc cacccgctgc tggatctcgt cgacggtgac
     4681 cttgcggtcg gcctggcgca gcaggtcgtg caggacgtcc tgcgccatct cgacggtgat
     4741 ctcgcggccg atcagctggc catgggcgac cacgcggttc agcgcaccct cgagctcgcg
     4801 gatgttggtg ctgatcttgt gggccaggaa ctccagcacc gcgagcggca ccggcacacg
     4861 cgcggtctcc gccttggtct gcaggatgct cagcctgagt tcataggtcg acgagtgaat
     4921 gtcggcgacc aagccgctgc ccagccgaga gcgcatgcgc tcctcgatat cctgcagctc
     4981 gctcggcggc ttctcggaac tgagcacgat ctgcttgttc tgctcgacca gcgagttgaa
     5041 ggtgaagaag aactcgtcct ggcttgcttc cttgccgcag atgaactgca cgtcgtcgac
     5101 catcagcacg tcgacgttgc ggaacaactc cttgaactga ccggtattct tggagcgcag
     5161 cgcctggatg aagcggttca cgaagctttc ggcggtgaga tagagcaccc gcgtcttggg
     5221 atcgcgctcg cggatggcgt gccagatggc atgcatcaga tgggtcttgc ccaggcccac
     5281 gccgccgaaa atgtagagcg ggttgcgctc cggcagcggg cggtcctgct cggcgatgtt
     5341 gcgcgcggcg gcgtaggcga actcgttggg cttgccgacc acgaagttgg cgaaggtgta
     5401 gcgagcctcc ggtccctgga agaggtcgtc gccgccgcgg ccgatcgacg gacccatccg
     5461 cggcatcggc ggctggtagt tctgcgagga cggcaccggc ggcacggcga tgatctcgtt
     5521 gggccggcgc ggcgccggcg gcggcacgag gttgacctcg acggtgccca cctcggcatg
     5581 caccgcctgc cagtaggcca gcacccggtc gccatagtgg cgggcgaccc agtcgcggac
     5641 gaaccgggtc ggcgcataca ga
//
LOCUS       DASWGA010000723        11755 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_971436, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000723 DASWGA010000000
VERSION     DASWGA010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 11755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11755
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_971436"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..125
                     /locus_tag="VF991_16885"
     CDS             <1..125
                     /locus_tag="VF991_16885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011974220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polyketide cyclase"
                     /protein_id="HEX9558173.1"
                     /translation="RYTARVRHWTVADREAHEKMGFHQGWGLCADQLTALVAKI"
     gene            157..930
                     /locus_tag="VF991_16890"
     CDS             157..930
                     /locus_tag="VF991_16890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007699438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9558174.1"
                     /translation="MPASPAQFVWYELMTTDAKAAESFYRKVVGWNVEDVSQGDMKYT
                     ALLAGEAPVAGLMTLPKEACDAGARPGWLGYVGVDDVDAYAGRVTKAGGKIHVPPTDI
                     PNIGRFAMVADPQGVTFNLFKPSADMSRPAADPAKPGIVGWHELLAVDGEKAFGFYAG
                     LFGWTKAEAIDMGAMGRYQLFAAGGAPIGGMMTKPAGVPAPFWTYYFQVDGIGAAMER
                     LKAGGGTVINGPMQVPGGSWIVQGLDPQNAMFSLVSPQA"
     gene            complement(921..1478)
                     /locus_tag="VF991_16895"
     CDS             complement(921..1478)
                     /locus_tag="VF991_16895"
                     /inference="COORDINATES: protein motif:HMM:NF024952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HEX9558175.1"
                     /translation="MASGQPTDRLFFAVFPDRVTALRIAKLAHQLRGIHGLKGRPLAA
                     DRYHVSLHHVGDYAGLPEGVVSAASRAASGAVMPRFAVAFDRAASFRGRPGNQPLVLR
                     GDDGVIGLTMLQDAVGTALEMAGLGPRAPHYTPHLTLLYGDRFVADHPVEPVGWTVHE
                     FVLVHSLLGRSRYLPLARFALGAQA"
     gene            1653..3347
                     /locus_tag="VF991_16900"
     CDS             1653..3347
                     /locus_tag="VF991_16900"
                     /inference="COORDINATES: protein motif:HMM:NF038122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NF038122 family metalloprotease"
                     /protein_id="HEX9558176.1"
                     /translation="MAALDSSAWLNVYVPPASSSDPLSASSSAVAVTSGGLTLDLLYD
                     ADALAAPASFRAGIEQAAAMLTAAISDPITVNLNIHYRGTGGGAFAGPDAGLFESYSS
                     ISADLIDHASLGDTIFNALPGGSSIQGQSLVAVWNAQLKALGFLGATAGTDDGSATFA
                     TDIDPDLLVGVALHELTHALGRVPFGPQPDIFDLFRFTAPDARLFQGGNIAPAAYFSV
                     DGGFTKSADYGQASDPSDFLNSGVQGPNDPFNEFYSSNTLQQFTTADLQQLDALGFHL
                     TSNAPVVIEAFGSTSLLRAANNDYFLVPVGGSSGPSVKYAGAPVTAGQFDPWAPIGAE
                     QTPDGYQIAWEMAGADQFTVWHTDSGGNYLWTDIGVVSGASATLEALEPGFHQDLNND
                     GTIGLPTTTVIEASGSTSLVQDANTYSLVPVGGSSGPDLKYAGAPVVAGQFDPWTPIG
                     AEQMAGGYEIAWKMTGADQFTVWHTDSGGNYLWTDIGVVSGSSATLEALEPSFQQDLN
                     NDGTIGVPANGGSGAVDLALLTSHLAATFVPPAAEGAGPVAAAQPSDQAFLAKAAV"
     gene            complement(3391..4374)
                     /locus_tag="VF991_16905"
     CDS             complement(3391..4374)
                     /locus_tag="VF991_16905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX9558177.1"
                     /translation="MAADALSDVLRTVRLTGATFFDVVATAPWVAEQPTREMVLPKVL
                     AGAEHLISYHVVTEGRCFASILGGEPIAVEAGEVIVFTRGDPHVMSSSPGMRADPVAP
                     GALDGAAASQLPFFVNYGDAGPPSVKLVCGFLACDARPFNPLLDNLPPIIKVGRPDGG
                     EAPWLGQFIRLATVESASKRAGGESVLAKLSELMFIEVVRRHLEALPPGQAGWLAGLR
                     DPSVGKALSLMHGAPARNWTIEELAKDAGASRSVLAERFAELVGMPPMHYLAKWRMQI
                     ASGLLSGGNAGMASVAAEVGYGSEAAFSRAFKKMVGVPPSAWRRRPGQDGV"
     gene            4553..4975
                     /locus_tag="VF991_16910"
     CDS             4553..4975
                     /locus_tag="VF991_16910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX9558178.1"
                     /translation="MTHFGSCFCGAVKLEVTGSPEAMGYCHCRSCRSWSGGPVNAFTL
                     WKPESVRITSGAEHLATFQKTKFSQRQYCAKCGGHLMNNHPPLGLVDVYAATIPTLAF
                     KPGVHVNYAETVLPMRDGLPKLKDFPAEFGGSGQTMAE"
     gene            4992..5813
                     /locus_tag="VF991_16915"
     CDS             4992..5813
                     /locus_tag="VF991_16915"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008138361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9558179.1"
                     /translation="MNVQTALPVAVDLATIKGRQQAAWSSGDYAVVGTTLQIVGETLC
                     EAVDLRSNQRVLDVAAGNGNATLAAARRFAEVVSTDYVAALLEHGRARAAAERLPVTF
                     QQADADALPFADASFDVVLSTFGVMFAPNQQQAANELRRVCRPGGKIGLANWTPESFI
                     GRLFKTIGKYVPPAPGLKSPALWGSKAHLDTLFGPDATVAATNRTFVFRYKSPQHWLE
                     VFRGYYGPVLKAFAAIDPPARQALETELLALLGEFNLAKDGTLVVPSEYLEVVVT"
     gene            5836..6453
                     /locus_tag="VF991_16920"
     CDS             5836..6453
                     /locus_tag="VF991_16920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558180.1"
                     /translation="MILGLSVSTFTAVHVALSLVGIASGVLALLGTLRARKAAGLTAV
                     FLLTTAATSLTGFFFHSTHVGMGHVIGVISLVVLVPTVLALYRYRLAGPWRWIYVAGA
                     TTVLYLNAFIGVWQAFAKIAVLHQLAPTPSAPPFLAAHLVVLAIVIAFAALAARRLPP
                     VTASPGEPVAMDLRYPRSRPRSWSRAMHDEHVSAAILQSSTVRGE"
     gene            6529..6978
                     /gene="msrB"
                     /locus_tag="VF991_16925"
     CDS             6529..6978
                     /gene="msrB"
                     /locus_tag="VF991_16925"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015339110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX9558181.1"
                     /translation="MQTYKKTPEALSKLSPEQFRVTQQSGTEYPGTGEYLDNKEPGIY
                     VDVVSGEPLFASSDKYESGCGWPSFTKPIEPANVAELSDATHGMIRTEVRSAHGDSHL
                     GHVFPDGPADRGGLRYCINSASLRFVHRDDMQAEGYGAYLDQVEDIK"
     gene            6975..7493
                     /gene="msrA"
                     /locus_tag="VF991_16930"
     CDS             6975..7493
                     /gene="msrA"
                     /locus_tag="VF991_16930"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX9558182.1"
                     /translation="MTEERAVLAGGCFWGMQDLIRRIKGVVSTRVGYAGGTVANATYR
                     HHEGHAEAIEIVFDPSKLSYRTLLEFFFQIHDPTTLNRQGNDQGTSYRSAIFYTTDTQ
                     RRTAEDTIADVEASGLWPGKVVTEVAPAGAFWEAEPEHQDYLERRPDGYTCHFIRPEW
                     KLPVRAKAVQET"
     gene            7554..8450
                     /locus_tag="VF991_16935"
     CDS             7554..8450
                     /locus_tag="VF991_16935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014989279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose bisphosphate aldolase"
                     /protein_id="HEX9558183.1"
                     /translation="MANDKMRTQISSKDGFIAALDQSGGSTPGALRLYGIADSAYKGD
                     VEMFRLMHEMRVRIMSAPSFTGARIVAAILFEATMDGQARGKPVPAFLWQERGVVPFL
                     KVDKGLEAEKDGASLMKPMPGLDALLARAVTLGIFGTKMRSVINLASKQGIAAVVAQQ
                     FDVAGQIAGHGLMPIIEPEVSIKSPDKAGAEALLRAELIGRLDALPANQQVMLKLTLP
                     DVPDFYSALVNHKRVARVVALSGGYTRADACRRLAANHGVIASFSRALTEGLTRSMSD
                     AEFDAALAKSIDEIYRASTVKV"
     gene            8574..8954
                     /locus_tag="VF991_16940"
     CDS             8574..8954
                     /locus_tag="VF991_16940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9558184.1"
                     /translation="MVELEAPRLDTVFHALGDATRRRMLRELSLGERTVGQLAEPFAI
                     SLQAASKHIKALENAGLIRREVHGRTHLCRLDPGPLASAHEWLGFYERFWTDRLDVLE
                     RLLGQEDAPESFTRKSPTRKGDDQ"
     gene            8951..9487
                     /locus_tag="VF991_16945"
     CDS             8951..9487
                     /locus_tag="VF991_16945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX9558185.1"
                     /translation="MTDLATLDAYGTLTEPATLTIRRLLPGPIERVWAYLTESDLRRK
                     WLAAGEMEMKIGATFELVWRNDELTNPPGQRPPGFPEEHRMEGRITELDPPRKLAITW
                     GKSGGVSFELEPKANQVLLTLIHRRLPDRGTMLNVSAGWHMHLDLLVARVSGNPDPAP
                     FWDGWSRLKQDYDPRLPA"
     gene            9548..10312
                     /locus_tag="VF991_16950"
     CDS             9548..10312
                     /locus_tag="VF991_16950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEX9558186.1"
                     /translation="MPKHKTATREDWLAARLELLAAEKELTRLSDELARRRQALPWVR
                     LSKPYRFETDEGSMSLAELFRGRSQLLVYHFMFGPDYTAGCPSCSAIADGFNGSVVHL
                     ANDDVTLCAVSRAPLAKLQAYKRRMGWTFPWASSLGSDFNVDFNVSFSAQQQREGAVD
                     YNYQRGGHALDMTPVPEPVAQLAAMSGTDAATYARDRPGMSAFALEDGGVYHTYSTYT
                     RGLDGLWGMYQWLDRAPKGRNETGPWFRRHDEYAKG"
     gene            complement(10341..11432)
                     /locus_tag="VF991_16955"
     CDS             complement(10341..11432)
                     /locus_tag="VF991_16955"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9558187.1"
                     /translation="MRLSSTLSWLVDAAGEMAGADRLLAEVGARLVEDGLPLAGGALT
                     LAVPHPLIARRTWLWRAESGEVIEALGFVAGGLAVAPAASQANDAGRWLAGLAAGPVH
                     EDVVGPRPDGPLLGWIGPRPFTPGEADALRQAARFAAAPLAAITARATLTAALEAYLG
                     RRSAARVLAGPLRRDIGETIQAALLYADLRGFTALSESNPPAAVISALDAWFDRIAGP
                     VHAFGGEVLKFIGDGVLAIFPVVGGAPRAACDAALRAVSAARVGMAHLDEARHQQGLQ
                     PLPFGAALHLGEMLWGNIGAADRLDFTAIGRAVNLVSRLEGLCRPLDKAVLVSGTFAA
                     ESGVPLIPLGTHALRGIASPCAVFTVPDN"
     gene            11533..>11755
                     /locus_tag="VF991_16960"
     CDS             11533..>11755
                     /locus_tag="VF991_16960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9558188.1"
                     /translation="MTEPLLVRRETHIAAPPATVFAFLTDPEKILSWMGTEAQTEMHP
                     GGLYLVKGVSSRVARGAFREVVPVHRLAYS"
BASE COUNT         2007 a         4096 c         3794 g         1858 t
ORIGIN      
        1 cgcgctacac cgcgcgcgtg cgccactgga cggtggccga ccgcgaggct cacgagaaga
       61 tgggcttcca ccagggttgg ggcctctgcg ccgaccagct caccgcgctg gtcgccaaga
      121 tctgatccgc aacaacacag ggcaaggagg gacaccatgc cggcttcacc tgcacagttc
      181 gtctggtacg aattgatgac caccgatgcc aaggccgcgg aaagctttta tcgcaaggtc
      241 gtcggctgga acgtcgagga cgtcagccaa ggcgacatga aatacaccgc cctgctcgcc
      301 ggcgaagcgc cggtcgccgg gttgatgacc ttgcccaagg aggcgtgcga tgccggcgcc
      361 cggccgggct ggctcggcta tgtcggtgtc gacgacgtcg atgcctatgc cggccgcgtg
      421 accaaggccg gcggcaagat ccatgtcccg ccgaccgaca ttcccaacat cggccgtttc
      481 gccatggtgg ccgatccgca aggcgtcacc ttcaatctct tcaagccctc tgccgacatg
      541 tcgcggccag ccgccgatcc ggccaagccc ggcatcgtcg gctggcacga gctgctggcc
      601 gtcgatggcg aaaaggcgtt cggcttctat gccggcctgt tcggctggac caaggccgag
      661 gcgatcgaca tgggcgcgat gggccgctac cagctgttcg ctgccggcgg cgcgccgatc
      721 ggcggcatga tgaccaagcc ggccggcgtg ccggcgccgt tctggaccta ttatttccag
      781 gtcgacggca tcggcgcggc gatggagcgg ctgaaggccg gcggcggcac cgtgatcaac
      841 ggtccgatgc aggttcccgg cggcagctgg atcgtgcagg gcctcgaccc gcaaaacgcg
      901 atgttctcgc tggtcagtcc tcaggcctga gcgccgagcg cgaagcgggc cagcggcagg
      961 tagcggctgc ggccgagcag gctgtgcacg agcacgaact catgcaccgt ccagcccacc
     1021 ggctcgaccg gatggtcggc gacgaaacgg tcgccgtaca acagcgtcag gtgcggcgtg
     1081 tagtgcggcg cgcgcgggcc gaggccggcc atctccagcg ccgtgcccac ggcgtcctgc
     1141 agcatcgtca agccgatgac gccgtcgtca ccgcgcagca ccaaaggctg gttgcccggc
     1201 cggccgcgaa agctcgccgc cctgtcgaac gccaccgcga agcgcggcat cacggcgccg
     1261 gacgcagcgc ggcttgccgc cgacacgacg ccttcgggaa gccccgcata gtcgccgaca
     1321 tggtgcagcg acacatgata gcggtcggcc gccagcggcc ggcccttcaa gccatggatg
     1381 ccgcgcagct gatgggcgag cttggcgatg cgcagggccg tgacgcgatc ggggaagacc
     1441 gcaaagaaca gacggtccgt gggttgcccg ctcgccatga caggacatgt agggcgccac
     1501 gccggtcgat caacaagtgt tcgatctgtg gtcacgctgc aaatcggcaa cccggcgctt
     1561 ggcttgtgcc gcgtgtgcgc cttagatccc ggcgtcagct gagaactgcg tctcgatatc
     1621 tgcccagtag cgtcccgtaa ggagtatcga tcatggcggc actagactct tcggcgtggt
     1681 tgaacgtcta cgtacccccg gcgagctcca gtgaccctct cagtgcttcc agttccgccg
     1741 ttgccgtcac gtccggcggc ctcacgctcg atctgttgta cgatgccgac gctctggcgg
     1801 ccccggcaag tttccgcgcc ggcatcgagc aggccgcggc gatgctgacg gcggcgattt
     1861 cggatccgat caccgtcaac ctgaacattc attatcgcgg aaccggcggc ggcgcctttg
     1921 ccggccccga tgccggcttg ttcgaaagct attcgtccat cagcgccgac ctgatcgatc
     1981 acgcctcgct cggcgatacg attttcaatg ccttgccggg cggctcatcg atccaggggc
     2041 aatccctggt cgctgtctgg aatgcacagt tgaaggcatt ggggtttcta ggggccaccg
     2101 ccggcaccga cgatggcagc gctacatttg ccaccgacat agatccggac ttgctggttg
     2161 gcgttgccct ccatgagctc acgcatgcgc tgggccgcgt gcccttcggt ccccaacccg
     2221 acattttcga cctgttccgc tttaccgccc ccgatgcccg tctatttcaa ggcggcaaca
     2281 tcgcgccggc cgcgtatttt tcagtcgacg gcggtttcac gaaatcggcc gactacggcc
     2341 aggcctccga tcccagcgac tttctcaata gcggcgtgca aggtcccaac gatccattca
     2401 atgaattcta ctcgagcaac actcttcagc agttcaccac ggccgacctg caacagctcg
     2461 atgctctggg atttcacctg acgtcgaatg cgccggtggt gatcgaggcc tttggatcga
     2521 ccagtctgct gcgggccgcg aacaacgatt attttctggt tccggtcggc gggtcgtcgg
     2581 gtccctcggt gaaatatgcc ggtgcgccag tcaccgccgg tcaatttgat ccatgggcgc
     2641 cgattggcgc ggagcagacc ccggatggct atcagatcgc ctgggagatg gccggcgccg
     2701 accagttcac ggtctggcac accgacagcg gcggcaacta cctgtggacc gacatcggtg
     2761 tggtgtcggg cgccagcgcg acgctcgaag cgctcgaacc cggcttccac caggacctca
     2821 acaacgacgg cacgatcggt ctacccacga cgacggtgat cgaggccagt ggatcgacca
     2881 gcctggttca ggacgcgaac acctactccc tggttccggt cggcgggtcg tcaggccccg
     2941 acctgaaata tgccggcgcg cccgtcgtgg cgggtcagtt tgatccgtgg acgccgatcg
     3001 gcgcggagca gatggcaggc ggctatgaga tcgcctggaa gatgacgggc gccgatcagt
     3061 tcacggtctg gcacaccgac agcggcggca actacctgtg gaccgacatc ggtgtggtgt
     3121 cgggctccag cgcgacgctc gaagcgctcg aacccagctt ccagcaagac ctcaacaacg
     3181 acggcacgat cggtgtgccc gcgaatggcg gttcgggggc cgtcgatctg gcgcttctga
     3241 caagccacct cgccgccacc ttcgtgccgc cggctgctga aggcgcgggc ccggtcgccg
     3301 cggcacagcc gtccgaccag gcgttcctgg ccaaggcggc ggtctgatct cgattgccgg
     3361 gcactgtcgc ccggctgtcg cgacatcggg ctacaccccg tcctgcccgg gacggcggcg
     3421 ccaggccgag ggcggcacgc ccaccatctt cttgaaggcg cggctgaagg ccgcctccga
     3481 tccgtagccg acttcggcgg cgacgcttgc catgccggcg ttgccgccgc tcaaaagacc
     3541 cgacgcgatc tgcatccgcc atttggcgag atagtgcatc ggcggcatgc cgacgagttc
     3601 ggcgaatcgc tcggccagca ccgagcgcga tgcgccggcg tccttggcca attcctcgat
     3661 cgtccagttg cgcgccggcg cgccgtgcat cagggacaac gccttgccga cagacgggtc
     3721 gcgcagcccg gccagccagc cggcttggcc cggcggcagg gcttccaggt ggcggcggac
     3781 cacctcgatg aacatcagct cgctcagctt ggctaaaacg ctttcgccac cggcccgctt
     3841 gctcgccgat tcgaccgtcg ccagtcggat gaactggcca agccacgggg cctcgccgcc
     3901 gtccggcctg ccgaccttga tgatcggcgg caggttgtcg agcagcggat tgaacggccg
     3961 ggcatcgcag gcgaggaagc cgcacaccag cttgaccgag ggcggcccgg cgtcgccgta
     4021 gttgacgaag aacggcaact ggctggcagc ggcgccgtcg agcgcgcccg gggcgaccgg
     4081 atcggcgcgc atgccggggc tgctcgacat gacatgcgga tcgccgcgcg tgaagacgat
     4141 gacctcgccg gcttcgaccg cgatcggctc gccgcccagg atgctggcga agcagcggcc
     4201 ttcggtgacc acgtgatagg agatcaggtg ctcggcgccc gccaggacct tgggcagcac
     4261 catctcgcgc gtcggctgct cggcgaccca cggcgccgtg gcgacgacgt cgaaaaacgt
     4321 cgccccggtc agtcgcaccg ttctcaacac atcggatagc gcatcagctg ccatggggct
     4381 ccaccggacg cccgatcatc tgctgcggac gcctgatcaa ggggcgcggc aattgccgac
     4441 gccgtgtcaa acattgccga cgcgcggtca ttcgcgcgcg gcgcggcgga acctagagta
     4501 ggtcccctcg cgcggcaata cccgcggccg gacgcattgg aaggagagag tcatgacgca
     4561 tttcggaagc tgcttttgcg gcgccgtcaa actggaagtc accggctcgc ccgaggccat
     4621 gggctactgc cattgccgtt cctgccgctc gtggtccggc ggtccggtga acgccttcac
     4681 cctgtggaag cccgagtcgg tgcggatcac gtcgggcgcc gagcacctcg cgacgttcca
     4741 gaagaccaaa tttagccagc gtcagtattg cgcgaaatgc ggcgggcacc tgatgaacaa
     4801 ccatccgccg ctcggcctcg tcgacgtcta cgccgcgacg atccccaccc tcgccttcaa
     4861 gcccggcgtg cacgtcaact acgccgagac ggtgctgccc atgcgcgacg gcctgcccaa
     4921 gctgaaggat tttcccgccg agttcggcgg ctccggccag accatggccg aatagcagaa
     4981 ggaacaggac aatgaacgtg caaaccgccc tccccgtcgc cgtcgatctc gccaccatca
     5041 agggccgcca gcaggccgcc tggagttcgg gcgactacgc cgtcgtcggc accaccttgc
     5101 agatcgtcgg cgagacgctc tgcgaggcgg tcgatctgcg cagcaaccag cgcgtcctcg
     5161 acgtcgccgc cggcaacggc aatgcgacgc tggccgcggc ccgccgcttc gccgaggtgg
     5221 tgtcgaccga ctatgtcgcg gccctgctcg agcacggccg cgcccgcgcc gccgccgagc
     5281 gcctgccggt caccttccag caagccgacg ccgatgccct tcctttcgcc gacgccagct
     5341 tcgatgtcgt gctgtcgacc ttcggggtga tgttcgcgcc caaccagcag caggccgcga
     5401 acgagctccg gcgcgtctgc cgcccgggcg gcaagatcgg cctggccaac tggacgccgg
     5461 agagtttcat cggccggctg ttcaagacca tcggcaagta cgtcccgccg gccccgggcc
     5521 tcaagtcgcc ggcgctgtgg ggcagcaagg cccatctcga caccttgttc ggtccggatg
     5581 ccaccgtggc agcgacgaac cggacgttcg tcttccgcta caagtcgccc cagcattggc
     5641 tagaagtctt ccgcggctac tacgggccgg tcctgaaggc gtttgccgcc atcgatccgc
     5701 cggcgcgcca ggccctcgaa acagaacttt tggctctgct cggggaattt aatctcgcca
     5761 aagacggtac tttggtcgtg cccagcgaat atctcgaagt agtcgtcacc tgagagcgtc
     5821 agaaggagac gtgtcgtgat cctgggactg tcggtatcga ccttcacggc cgtgcacgtg
     5881 gccttgagcc tggtcggcat cgcatccggt gtcctggctc tgctcggcac gctccgcgcc
     5941 aggaaggcgg cgggtctcac cgccgtcttc cttctcacca cggccgccac cagcctgacc
     6001 ggctttttct tccattcgac gcatgtcggg atgggccacg tgatcggcgt catctcgctg
     6061 gtcgtcctgg tgccgacggt gcttgccctc tatcgctacc ggctggccgg gccgtggcgc
     6121 tggatctacg tcgccggcgc gacgacggtg ctctatctca acgccttcat cggagtctgg
     6181 caggccttcg caaagatcgc cgtcctacac cagctcgcgc cgaccccgtc cgcgccgccg
     6241 ttcctcgccg ctcacctggt cgtgctggcg atcgtcatcg cctttgcggc gctcgcggcg
     6301 aggcgcttgc ctcctgtcac ggcgagcccc ggggagccgg tggcgatgga tctgcgatat
     6361 ccgcgcagcc ggccgcgctc atggtcgcga gcgatgcacg atgaacacgt ttcggcggcg
     6421 atcctgcagt cgagcactgt gcgcggcgag tagcgccggg gctggcacaa cgacgctttg
     6481 cgcctatatg tttccctgtc tccgccatgt gtgcgacagg gtaagcaaat gcagacctac
     6541 aagaagaccc cggaagccct ctcgaagctc tccccggagc agtttcgcgt cacccagcag
     6601 agcgggaccg agtatcccgg caccggcgaa tatctcgaca acaaggagcc gggcatctac
     6661 gtcgacgtcg tgtcgggcga gccattgttc gcctcctccg acaaatacga atcaggctgc
     6721 ggctggccca gtttcaccaa gccgatcgag cccgccaacg tcgccgagct gagcgacgcc
     6781 acgcacggca tgatccgcac cgaggtgcgc tcggcgcacg gcgacagcca tctcggccac
     6841 gtctttcccg acggtcctgc cgatcgcggc gggctgcgct actgcatcaa ctcggcctcg
     6901 ctgcgcttcg tccaccgcga cgacatgcag gccgagggct atggggctta tctcgaccag
     6961 gtggaggata tcaaatgacc gaggaacggg cggtgctggc cggcggctgc ttctggggca
     7021 tgcaggacct catccgtcgc atcaagggag tcgtctcgac gcgggtcggc tacgccggcg
     7081 gcaccgtggc caacgcgacc tatcgccatc acgagggcca tgccgaagcg atcgagatcg
     7141 tcttcgaccc gtcgaagctg agctaccgca cgctgctgga attcttcttc cagatccacg
     7201 atcccacgac cttgaaccgc cagggcaacg atcagggaac gagctaccgt tcggcgatct
     7261 tttacacgac cgacacgcag cggcgcaccg ccgaggacac gatcgccgac gtcgaagcct
     7321 ccggcctgtg gcccggcaag gtcgtgaccg aagtggctcc cgccggcgcc ttctgggagg
     7381 ccgagccgga gcaccaggac tatctcgaac gccgtcccga cggatacacc tgccacttca
     7441 tccggcccga atggaagctc ccggtgcggg cgaaagccgt ccaggagact tgaacggcgt
     7501 tggccttcat tcacctcccc cgtaagacgg gggaggcgta taaggatgac aacatggcca
     7561 atgacaagat gagaacccag atctcctcaa aggacggctt catcgccgcg ctcgaccaga
     7621 gcggcggctc gacgcccgga gcgctgcgcc tctacggcat tgccgacagc gcctataagg
     7681 gcgatgtcga gatgttcagg ctgatgcacg agatgcgcgt gcgcatcatg tcagcgccgt
     7741 ccttcaccgg cgccaggatc gtcgcggcca tcctgttcga ggccaccatg gacggccagg
     7801 cgcgaggcaa acccgttccc gctttcctat ggcaagagcg cggcgtcgtc cccttcctca
     7861 aggtcgacaa ggggctcgag gccgagaagg acggcgcgag cctgatgaag ccgatgccgg
     7921 gactcgacgc gctgctcgcc cgggcggtga cgctcggcat cttcggcacc aagatgcgct
     7981 cggtcatcaa tctggcgtcg aaacagggca tcgccgccgt ggtggcccag cagttcgacg
     8041 tggcggggca gatcgccggg cacgggctga tgcccatcat cgagccggaa gtctcgatca
     8101 agagcccgga caaggccggc gccgaagccc tgctgcgcgc cgagctgatc ggcaggctcg
     8161 acgccctgcc ggcgaaccaa caggtgatgc tcaagctcac cctccccgac gttccggatt
     8221 tctattcggc gctggtcaac cacaagaggg tggcccgggt cgtggcgctg tccggcggct
     8281 acacgcgggc cgacgcctgc cggcgccttg ccgccaacca cggcgtgatc gcgagctttt
     8341 cgcgcgccct gacggagggc ctcacccgtt cgatgagcga cgccgaattc gatgcagcgc
     8401 tggcgaaatc catcgacgag atctaccgcg cctcgaccgt gaaggtttga tacaaggccg
     8461 cgcgagacga agtcgagggc atccgctcga ccttcagaag ccgagcttgg tccgccgcac
     8521 aatcatcaac cagtcggttg acaatccgtt cgggcaagcc tattctcaac cacatggttg
     8581 aattagaagc cccccggctc gacaccgtct tccacgcctt gggcgacgcc acccggcggc
     8641 ggatgctgcg cgaactcagc cttggcgagc ggacggtcgg ccagctggcg gaacccttcg
     8701 ccatctcgct gcaggccgcg tcgaagcaca tcaaggcgct ggagaatgcc ggactgatcc
     8761 gtcgcgaagt gcacggccgc acccatctct gccgcctcga ccccggaccg ctcgccagcg
     8821 cccacgagtg gctgggcttc tacgagcgct tctggaccga ccgtctcgat gtcctcgaac
     8881 ggctcctcgg ccaggaggac gcccccgaat cattcactcg caaatccccc acccgcaaag
     8941 gagacgacca atgaccgacc tcgcgaccct ggacgcctat ggcaccctga ccgagcctgc
     9001 cacgttgacg atccggcgcc tgctgcccgg ccccatcgag cgcgtctggg cgtatctcac
     9061 ggagagcgac ctgcgccgca aatggctggc ggcgggcgag atggagatga agatcggcgc
     9121 gaccttcgag ctggtgtggc gcaacgacga gttgaccaac ccgccgggcc agcggccacc
     9181 cggcttcccc gaagagcacc gcatggaggg ccgcatcacc gagctcgatc cgccgcgcaa
     9241 gctcgccatc acctggggaa agagcggcgg cgtttccttc gagctggagc ccaaggccaa
     9301 ccaggtcctg ctcaccctga tccatcgccg cctgcccgac cgcggcacca tgctcaacgt
     9361 cagcgccggc tggcacatgc acctcgacct cctggtcgcc cgcgtgtcgg gcaacccaga
     9421 cccggcaccc ttctgggacg gctggagccg cctcaagcag gactacgatc cgcggctgcc
     9481 ggcctgacct catgctctgc cggaccgcgc gcggtccgga agactaccga cacgaaggag
     9541 agaagagatg ccgaagcaca agaccgcaac acgcgaggac tggctggccg cccggctcga
     9601 gctgctcgcg gccgagaagg agctgacgcg gctgagcgac gagctggcgc ggcggcggca
     9661 ggcgctgccc tgggttcgac tctccaagcc gtatcgcttc gagaccgacg agggctcaat
     9721 gtccctcgcc gagctcttcc gaggccgctc gcagctcctc gtctatcact tcatgttcgg
     9781 gcccgactac acggcggggt gtccgtcctg ctcggcgatc gcggacgggt tcaacggctc
     9841 cgtcgtccac ctggccaacg acgacgtcac gctctgcgcg gtgtcgcgcg cgccgctcgc
     9901 gaagctgcag gcgtacaagc ggcggatggg ctggacgttt ccctgggcgt cctcgctcgg
     9961 cagcgacttc aacgtcgact tcaacgtctc gttcagcgcg cagcaacagc gcgagggggc
    10021 cgtcgattac aactaccagc gcggcggcca cgctttggac atgacaccgg tccccgagcc
    10081 cgtcgcccag ctcgcggcca tgtcgggaac cgatgcggcc acgtacgcgc gcgacaggcc
    10141 gggcatgagc gcgttcgcgc tcgaggacgg cggcgtctac cacacctatt ccacctatac
    10201 gcgcggactg gacggcctgt ggggcatgta ccagtggctc gaccgagcgc ccaagggacg
    10261 caacgagacc gggccgtggt tccgccgcca tgacgaatac gccaagggct gagcgaagtc
    10321 gcagctgtcg tcctgtcggc tcaattgtcc ggcacggtga agacggcgca gggcgatgcg
    10381 atgccgcgca acgcatgcgt tccgagcggg atcagcggca cgccgctctc ggcggcgaac
    10441 gtgcccgaga caaggacagc cttgtcgagc ggccggcaca gcccttccag ccggctgacc
    10501 agattgacgg cgcggccgat cgccgtgaaa tccagccgat cggcagcacc gatattgccc
    10561 cacagcattt cgcccaggtg cagggcggcg ccgaacggca gaggctgcag gccctgctga
    10621 tgtcgcgcct cgtcgagatg cgccattccg acccgcgcgg cggagaccgc ccgcagggcg
    10681 gcgtcgcagg cggcacgggg cgcccctccg acgaccggga agatcgccag cacgccgtcg
    10741 ccgatgaatt tcagcacttc gccgccgaag gcgtggaccg ggccggcgat acggtcgaac
    10801 caggcatcga gtgccgagat gaccgccgcg ggaggattgc tttcggagag cgccgtgaag
    10861 ccgcgcagat cggcatagag cagcgcggcc tggatggtct cgccgatatc gcgccgcaat
    10921 ggtcccgcca gcacgcgtgc agcactgcgc cggccgagat aggcctcgag agccgccgtc
    10981 agcgtggcgc gcgcagtgat tgcggcgagc ggcgccgcgg cgaaacgcgc ggcctggcgc
    11041 aacgcatcgg cctcgccggg cgtgaacgga cgcggcccga tccagccgag caagggcccg
    11101 tccggccggg gcccgacgac gtcctcatgg accgggccgg ccgcgaggcc ggcgagccag
    11161 cgaccggcat cgttggcctg gcttgccgct ggcgcgaccg cgagccctcc cgccacgaag
    11221 cccagggcct cgatcacctc cccgctctcg gcccgccaca gccatgtgcg ccgcgcgatc
    11281 agcggatgcg gcacggccag ggtcagggcg ccacccgcga gcggcaggcc atcctcgacc
    11341 agacgcgcgc cgacttccgc cagcagccgg tcggcgccag ccatctcgcc ggccgcgtcg
    11401 acgagccagg agagcgtcga agagagccgc atggaccgat tatgaggttg acgcagcgcc
    11461 cttgctacga gttattaccg cgaggttggc tccgacgctg ccatccgcgc agccgcaatc
    11521 aaggagactc ccgtgactga accgctcttg gtccggcgtg agacccatat cgcagccccg
    11581 cccgccaccg tcttcgcctt cttgaccgat cccgaaaaga tcctgagctg gatgggcacc
    11641 gaagcgcaga cggagatgca tccgggcggg ctctatcttg tcaaaggtgt cagcagccgc
    11701 gtggcgcgcg gagccttccg tgaggtcgtg ccggtccacc gactcgccta cagct
//
LOCUS       DASWGA010000724         7472 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_211053, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000724 DASWGA010000000
VERSION     DASWGA010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7472
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211053"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..601)
                     /gene="pgl"
                     /locus_tag="VF991_16965"
     CDS             complement(<1..601)
                     /gene="pgl"
                     /locus_tag="VF991_16965"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF013356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEX9558189.1"
                     /translation="MRGRIETLADPAALAHHVAEWMTEAALAANGIFRVSLSGGSTPK
                     ALFTLLASDQFLGRFPWTRVAWYWGDERFVPHDHPESNYRMTRETMLSKAPVPPANVH
                     PVPADGTPDDAARRYERTLQMAYGAAVLDPARPLFDITLLGLGPDGHTASLLPGEPVL
                     EERQRWVAAVSHGRPEIRITMTYPVIESSRQVAFLVTGKE"
     gene            complement(601..1419)
                     /locus_tag="VF991_16970"
     CDS             complement(601..1419)
                     /locus_tag="VF991_16970"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEX9558190.1"
                     /translation="MADKRKISLVLSDVDGTLVNEQKVLTPRAESAVRALHRAGIGFA
                     ITSGRPPLGMAMLFDALALSTPIAGFNGGLFVKRDLTILAQKTVPADVARQAIDLVRD
                     HGLDAWVYSGNDWLITKPDGAHVAHEAWTVKFDPKVVTDFGDALQQVAKVVGVSDDHD
                     RVRRCEADAQAVFGEHATANRSQPYYLDITSRYANKGAVADYLSSHLGVPAEEIATIG
                     DSPNDVLMFKRSGFSIAMGNASDEVKAEAVAITESYNDEGFAKAIERFILGSGE"
     gene            complement(1442..2932)
                     /gene="zwf"
                     /locus_tag="VF991_16975"
     CDS             complement(1442..2932)
                     /gene="zwf"
                     /locus_tag="VF991_16975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEX9558191.1"
                     /translation="MVIFGAAGDLTKRLVVPALYNLVNARRLPNGFQLVGVDQAARTA
                     EEWRAGLTATMNEFVGHDGEFQADHIDPDAWQWLTERMTYLQGDLMDPATYRRLGEHL
                     AGLDKTAGTAGNHLFYLAVADRFFSVAVAGLGTAGLVAEKDGQWRRVVIEKPFGHDLA
                     SARALNAAILKTLQEHQIYRIDHFLGKETVQNIMALRFANGLFEPLWNRQHIDHVQIT
                     VAETVGVEHRAKFYEKTGALRDMVPNHVFQLLAMTAMEPPISFDADAVRAKKAEVIEA
                     IRPFSTARALKDAVRGQYAAGTVLGKPVAAYREEPDVAPDSTIETFVACRLKIDNWRW
                     AGVPFYLRTGKYMKSRWTEIAIRFHQAPYTLFRGTNVERMNPNWMILRLQPDEGISLE
                     FAAKRPGPTVKLSTVSMDFAYKTYFKMAPNTGYETLIYDCMIGDATLFQRADNVEAGW
                     RVVQPIVDAWASNPPKDFPNYVAGSDGPAAADNLLARGGRAWRPLE"
     gene            complement(3027..5084)
                     /gene="tkt"
                     /locus_tag="VF991_16980"
     CDS             complement(3027..5084)
                     /gene="tkt"
                     /locus_tag="VF991_16980"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019863776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX9558192.1"
                     /translation="MTKDELDQLAINTIRTLSIDAVQQAKSGHPGTPMALAPLVYTLW
                     NRVMRFDPKDPIWPNRDRFVLSNGHASMLLWSVLHLTGTQAVNAEYEHLGKPSVTLDD
                     IRHFRQLDSKAPGHPEYHWVSGVETTTGPLGQGIATSVGMAMARRWLASRYNQPGFEL
                     FDYDIYAVCGDGCLMEGVGSEAASLAGHLGLDELCWIYDNNHITIEGKTSITFTEDVA
                     ARFLAYRWNVLRVGDANDLQRIEDALTVFRDTKGRPTLIILDSHIGYGSPHKIDTAAA
                     HGEPLGEDEVRLTKRAYGWPEDAKFLVPDGVMQHFAAGIGARGAEARRRWEALFADYR
                     KKSSELATEIDQMQRRELPAGWDHNLPSFSPDPKGIAGRDASGEVLNVLAQNIPWFLG
                     GSADLGPSNKTTLKFAGAGDFEAGSPGGRNLHFGIREHAMAAVVNGLSLSKLRPFGAT
                     FFIFSDYARPAIRLSAIMELPTIFVFTHDAMGDGEDGPTHQPVEQLLSLRAVPGLVVL
                     RPGDANEVVEAYRYILQLRHQPAVIALSRQPLPTFDRKKYASAGGVARGAYVMADAPG
                     GPPEIILIASGSEVSLIVEAHEVLASRGIRSRVVSMASWDIFEHQPKSYRDEVLPAAV
                     KARIAVEQGSVLGWERYVGAEGRVIGMKTFGASAPLKELQRKFGFEPERVVATALELL
                     GRK"
     gene            complement(5124..6143)
                     /gene="gnd"
                     /locus_tag="VF991_16985"
     CDS             complement(5124..6143)
                     /gene="gnd"
                     /locus_tag="VF991_16985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011653425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HEX9558193.1"
                     /translation="MQLGMIGLGRMGANMVRRLLKGGHQCVVFDMSAKAVAELAKEKA
                     VGTASLAEFTKSLAKPRAVWLMVPAGVVDKTIADLLPHLESGDILIDGGNSYYVDDIR
                     RAKELAPKGIHYVDVGTSGGVWGLERGYCMMIGGEPAVVKRLDPIFATLAPGPGDIPR
                     TPGREKAGGTSEQGYLHCGANGAGHFVKMVHNGIEYGVMAAYAEGLAVLKAANIGKKT
                     GVVDAETTPLRDPEHYQYDLNLPDITELWRRGSVIASWLLDLQAAALIKDPALSKFGG
                     RVSDSGEGRWTIKAAIDEGVPAHVLSSALYERFSSRGEADFADKLLSAMRYEFGGHIE
                     KPAKS"
     gene            complement(6178..>7472)
                     /gene="pgi"
                     /locus_tag="VF991_16990"
     CDS             complement(6178..>7472)
                     /gene="pgi"
                     /locus_tag="VF991_16990"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020629191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEX9558194.1"
                     /translation="VPEVHAVLDKMADFSQRLRSGAWKGHTGKRIRNVINIGIGGSDL
                     GPVMAYEALKHYSARDMTFRFVSNVDGTDFAEAVHDLDPAETLFIVSSKTFTTLETMT
                     NAHTARDWLLAGLKGEASATAKHFVAVSTNAQEVAKFGIDTANMFGFWDWVGGRYSMD
                     SAIGLSTMLAIGPDNFRAMLDGFHQIDEHFRSTPFERNLPVLMGLLGLWYNDFFGAQT
                     TAVLPYEQYLKRFPAYLQQLTMESNGKHVTQDGVAVNYDTGPIYWGEPGTNGQHSFYQ
                     LIHQGTRLIPCDFIAFTRTLNRVGRHHDMLLANVFAQTEALAFGKTAEQVKAEGTPDW
                     LVPHRLFEGNRPSNTLLLDALTPAALGKLVALYEHSVFTQGTIWQIDSFDQWGVELGK
                     ALAQRIIPELENVTEPKLEHDSSTNALIRRYRKLKGTG"
BASE COUNT         1237 a         2435 c         2473 g         1327 t
ORIGIN      
        1 tctccttgcc cgtcaccaga aatgcgacct gccggctgct ctcgatcacc gggtaggtca
       61 tggtgatgcg gatctcaggc cggccatgcg acaccgcggc gacccaacgc tggcgctcct
      121 ccagcaccgg ttcgccgggc agcagcgagg cggtatgacc gtcggggccg aggccgagca
      181 gggtgatgtc gaacaagggg cgcgccgggt cgagcaccgc ggcgccatag gccatctgca
      241 gggtccgctc gtagcgccgc gcggcgtcgt cgggcgtgcc gtcggccggc acgggatgca
      301 cgttggccgg cgggacgggc gccttggaca gcatggtctc gcgggtcatc cggtagttgc
      361 tctccggatg atcgtgggga acgaagcgct cgtcgcccca ataccaggcg acccgcgtcc
      421 acggaaagcg tccgaggaac tgatcggaag ccagcagcgt gaacagcgcc ttgggcgtcg
      481 agccgcccga cagcgacacg cgaaagatgc cgttcgccgc cagcgccgcc tcagtcatcc
      541 attcggcgac gtggtgcgcc agcgccgccg gatcggcaag cgtctcgatg cggcctctca
      601 tcactccccc gagcccagga tgaagcgctc gatcgccttg gcgaagcctt cgtcattgta
      661 ggactccgtg attgcgacgg cctcggcctt tacctcgtcg gaggcattgc ccatggcgat
      721 gctgaagccg gagcgcttga acatcagcac gtcgttcggc gaatcgccga tggtggcgat
      781 ctcctcggcc ggcacgccca ggtgagacga gaggtagtcc gcgaccgccc ctttgttggc
      841 gtagcggctg gtaatgtcga ggtagtaggg ctgcgatcgg ttcgccgtcg catgctcgcc
      901 gaacaccgcc tgggcgtcgg cctcgcagcg gcgaacccgg tcgtgatcgt cgctgacgcc
      961 gacgaccttg gcgacctgct gcagggcgtc gccgaaatcc gtcacgacct tggggtcgaa
     1021 cttgaccgtc cacgcctcgt gcgcgacatg ggcgccgtcg ggtttggtga tcagccaatc
     1081 gttgccgctg tagacccagg cgtcgaggcc gtggtcgcga accagatcga tcgcctggcg
     1141 cgcgacatcg gcgggcacgg tcttctgcgc caggatcgtg agatcgcgct tgacgaaaag
     1201 cccgccgttg aagccggcga tcggtgtgct gagcgcgagc gcgtcgaaca gcatggccat
     1261 gccgagcggc ggccggccgc tggtgatggc gaagccgatc cccgccctgt gcagcgccct
     1321 gacggcgctc tcggcgcgcg gggtcagcac cttctgttcg ttgacgagcg tgccgtcgac
     1381 gtcggacagc accagggaga tctttcgctt gtctgccatc gccaccccta caagtgttcg
     1441 ctcattccag cggtcgccag gcgcgtccgc cgcgtgccag caagttgtcg gccgccgccg
     1501 ggccgtcgct ccccgcaaca tagtttggga aatccttggg cggattgctc gcccaggcgt
     1561 caacgatggg ctgcacgacc cgccaacccg cctcgacgtt gtcggcgcgc tggaacaggg
     1621 tcgcgtcgcc gatcatgcag tcgtagatca gcgtctcgta tccggtgttg ggcgccatct
     1681 tgaaataggt cttgtaggcg aagtccatgc tgacggtgct gagcttcacc gtcggcccgg
     1741 ggcgcttggc ggcgaactcg agcgagatgc cctcgtcggg ctggaggcgg aggatcatcc
     1801 agttgggatt catccgctcg acgttagtgc cgcggaacag cgtgtagggc gcctgatgga
     1861 agcggatggc gatctcggtc caccggcttt tcatatattt gccggtgcgc aggtagaacg
     1921 gaacgccggc ccagcgccag ttgtcgatct tgagcctgca ggcgacgaaa gtctcgatcg
     1981 tcgagtccgg ggcgacgtca ggttcctcgc gataggccgc taccggcttg cccaggaccg
     2041 tgccggccgc gtactggccg cgcacggcgt ccttcaacgc gcgcgccgtg ctgaagggac
     2101 ggatggcctc gatgacttcc gccttcttgg cccgcaccgc atcggcgtcg aaggagatcg
     2161 gcggctccat cgccgtcatc gccaggagct ggaacacatg gttgggcacc atgtcgcgca
     2221 gcgcgccggt cttttcatag aacttggccc ggtgctcgac gccgacggtt tcggccacgg
     2281 tgatctggac gtggtcgata tgctgcctgt tccacagcgg ctcgaacagg ccgttggcaa
     2341 agcgcagcgc catgatgttc tggaccgttt ccttgccgag gaaatgatcg atccggtaga
     2401 tctgatgctc ctgcagcgtc ttcaggatcg ccgcattgag cgccctggcc gaagccagat
     2461 cgtggccgaa cggcttttcg atcacgacgc gtcgccattg gccgtctttc tcggccacca
     2521 ggccggccgt cccaaggccc gcgaccgcga cgctgaagaa gcgatcggcg acggcgagat
     2581 agaaaaggtg gttgcccgcc gtgccggccg tcttgtccaa ccccgccaga tgctcgccga
     2641 gccggcggta ggtcgccgga tccatcaggt cgccctgcag gtaggtcatg cgctcggtaa
     2701 gccattgcca ggcgtccggg tcgatatgat cggcctggaa ctcgccgtca tggccgacga
     2761 attcgttcat tgttgccgta aggccggcgc gccactcctc cgcggtcctg gccgcctggt
     2821 cgacgccgac gagctggaag ccgttgggca gccgcctggc attcaccagg ttgtagagcg
     2881 ccggcacgac cagccgcttg gtcaggtcgc cggcggcacc gaagatcacc atggcgcagg
     2941 gcggcgccac cgcggcaccg tcgtccggcg ccgcgcgctc ggccttggcg cgttcagcct
     3001 gcttgcctgc catcatcgtc ctttcgtcac ttgcgcccga gcagctccag agccgtcgcg
     3061 acgacgcgct cgggctcgaa gccgaacttg cgctgcagct ccttgagcgg cgccgaggcg
     3121 ccgaaggtct tcatgccgat gacgcgcccc tcggccccga catagcgctc ccaacccaga
     3181 accgagccct gctcgacggc gatgcgcgcc ttcaccgcgg ccggcagcac ctcgtcgcgg
     3241 taggacttcg gctggtgctc gaagatgtcc cacgacgcca tggagacgac acgggaccga
     3301 attccccgcg acgccagcac ttcatgggcc tcgacgatca gcgagacctc gctgcccgac
     3361 gcgatcagga tgatctcggg cgggccgccc ggcgcatcgg ccatgacata ggcgccgcgc
     3421 gcgacgccgc ccgccgaggc gtactttttg cgatcgaagg tcggcagcgg ctggcgcgac
     3481 aatgcgatca ccgccggctg atggcgcagc tggaggatgt agcggtaggc ctcgacgacc
     3541 tcgttggcat cgccgggtcg cagcacgacc aggccgggaa ctgcgcgcag cgacaagagc
     3601 tgctcgaccg gctgatgggt cggtccatcc tcgccgtcac ccatggcgtc atgggtgaaa
     3661 acgaaaatgg tcggaagctc catgatcgcg gacagtcgaa tggccggccg ggcatagtcg
     3721 ctgaagatga agaaggtcgc tccgaacggc cgcagcttgg agagcgacag cccgttgacg
     3781 accgccgcca tggcgtgctc gcggattccg aaatggagat tgcggccgcc gggactgccg
     3841 gcctcgaagt cgcccgcgcc ggcgaatttc agggtcgtct tgttcgaggg tccgaggtcg
     3901 gccgagccgc cgagaaacca gggaatgttc tgggcgagca cgttcagcac ctcgcccgag
     3961 gcgtcgcgtc cggcgatgcc cttgggatcg ggcgaaaagc tcggcaggtt gtggtcccac
     4021 cccgccggca gctcgcgccg ttgcatctgg tcgatctcgg tggcgagctc ggaggatttc
     4081 ttgcggtagt cggcaaagag cgcctcccag cggcgccgcg cctcggcgcc gcgcgcgccg
     4141 atcccggcgg cgaagtgctg catgaccccg tcgggcacca ggaacttggc gtcctccggc
     4201 cagccatagg cgcgcttggt gagccggacc tcgtcctcgc ccaggggttc gccatgggcc
     4261 gcggcggtat cgatcttgtg cggcgagcca tagccgatgt ggctgtccag gatgatcagc
     4321 gtcggccggc ccttggtgtc gcggaagacc gtcagcgcat cctcgatccg ctgcagatca
     4381 ttggcatcgc cgacccgcag cacgttccat cgataggcga ggaagcgcgc cgcgacatcc
     4441 tcggtgaagg tgatcgacgt cttgccctcg atggtgatgt gattgttgtc gtagatccag
     4501 cacagctcgt cgaggccgag atggccggcc agcgaggccg cctccgagcc gaccccttcc
     4561 atcaggcagc cgtcgccgca caccgcatag atgtcatagt cgaacagctc gaagcccggc
     4621 tggttgtagc ggctggcaag ccagcgccgc gccatcgcca tgccgacgct ggtggcgatg
     4681 ccctgcccca gcggaccggt cgtcgtctcg accccggaca cccagtgata ttccggatgg
     4741 cccggcgcct tgctgtcgag ctggcggaag tggcggatgt cgtcgagggt gaccgagggc
     4801 ttgcccaggt gctcgtattc tgcgttcacc gcctgggtgc ccgtgagatg caggacggac
     4861 cacagcagca tcgaggcatg gccgttcgac agaacgaagc ggtcgcgatt gggccagatc
     4921 gggtccttgg gatcgaagcg catgacccgg ttccacagcg tatagaccag cggcgccaac
     4981 gccatcggcg tgccgggatg gcccgacttc gcctgctgga ccgcgtcgat ggacagcgtg
     5041 cggatcgtgt tgatcgccag ttgatcgagc tcgtccttgg tcatgtcacg cgactcccgg
     5101 ggctgcattc acgcttcgct gggctatgac ttggccggct tctcgatatg cccgccgaac
     5161 tcgtagcgca tggccgagag cagcttgtcg gcgaaatccg cctcgccgcg cgaactgaac
     5221 ctctcataga gcgccgacga cagcacatgg gccggcaccc cctcgtcgat ggcggccttg
     5281 atcgtccagc ggccttcgcc ggagtccgat acccgtccgc cgaatttcga caaagcggga
     5341 tccttgatca gggccgcagc ctggaggtcg agcagccacg acgcgatcac gctgccgcgc
     5401 cgccagagtt ccgtgatgtc cggcaggttg aggtcgtatt gatagtgctc gggatcgcgc
     5461 agcggcgtgg tttccgcatc cacgacccca gtcttctttc cgatgttggc cgccttgagc
     5521 acggccagcc cttcggcata ggccgccatc acgccgtatt cgataccatt gtgcaccatc
     5581 ttgacgaaat ggccggcgcc attggccccg caatgcagat agccttgctc ggacgttcca
     5641 ccggcctttt cgcgtcccgg cgtgcgcggg atgtcgccgg ggcccggtgc gagggtggcg
     5701 aagatcgggt cgagacgctt caccacagcg ggctcgccgc cgatcatcat gcaatagccg
     5761 cgctcgaggc cccagacgcc gccgctggtg ccaacatcga catagtggat gcccttgggc
     5821 gcgagctcct tggctcggcg gatgtcgtcg acatagtacg aattgccgcc gtcgatcagg
     5881 atatcgccgc tctcgagatg gggcagcaga tcggcgatgg tcttgtcgac cacgccggcc
     5941 ggcaccatca gccagaccgc gcgcggcttc gccagactct tggtgaactc cgccagcgaa
     6001 gcggtgccga cggccttttc cttcgcgagc tccgccaccg cctttgcaga catgtcgaac
     6061 accacgcact gatggccgcc cttcaagagg cggcgcacca tgttcgctcc catacggcca
     6121 aggccgatca ttcccagttg catggcttag ccctcctcga cgatttccac gaacttctca
     6181 gccggttccc ttgagcttgc gatagcgccg gatcagcgca ttggtcgagc tgtcgtgctc
     6241 gagcttgggt tccgtcacgt tctcgagttc gggaatgatc cgctgggcaa gagccttgcc
     6301 cagctcgacg ccccactggt cgaaagaatc gatctgccag atcgtgccct gggtgaagac
     6361 gctgtgctcg tagagcgcga ccagcttgcc cagcgcggcc ggtgttaaag catccagcag
     6421 cagcgtgttc gacggacgat tgccttcgaa cagccgatgc ggcaccagcc agtcgggcgt
     6481 gccttccgcc ttgacctgct cggcggtctt gccgaaagcc agcgcctcgg tctgggcgaa
     6541 gacattggcc agcagcatgt cgtgatgcct gcccacgcga ttgagggtcc gggtgaaggc
     6601 gatgaaatcg cagggtatga gccgggttcc ctggtggatc agttgataga aggaatgctg
     6661 gccgttggtc cccggctcgc cccagtagat cggcccggtg tcgtaattga cggcgacgcc
     6721 gtcctgggtc acgtgcttgc cgttgctctc catggtgagc tgctggagat aggcgggaaa
     6781 gcgtttcaga tattgctcat agggcaacac ggccgtggtc tgggcgccga agaaatcgtt
     6841 gtaccagagg ccgagcaggc ccatcagcac cggcaggttg cgctcgaagg gcgtgctgcg
     6901 gaaatgctcg tcgatctgat ggaagccgtc cagcatggcg cggaaattgt ccgggccgat
     6961 ggccagcatg gtcgagaggc caatggctga atccatggaa taacgcccgc ccacccagtc
     7021 ccagaaaccg aacatgttgg cggtgtcgat accgaacttc gccacctcct gggcattggt
     7081 ggaaacggcg acgaaatgct tggcagtagc ggaggcctcg cccttcaggc cggccagcag
     7141 ccagtcacgc gcggtgtgcg cattggtcat cgtctccaat gtggtgaagg tcttggaaga
     7201 gacgatgaac agcgtctccg cgggatcgag gtcgtgcacc gcctcggcga aatccgtgcc
     7261 atcgacattg gagacgaagc ggaaggtcat gtcgcgcgcg ctgtagtgct tcagcgcttc
     7321 gtaggccatg acagggccga gatccgagcc gccgataccg atattgatca cgttgcggat
     7381 gcgcttgccg gtatggccct tccaggcgcc actgcgcagc cgttgggaga aatccgccat
     7441 cttgtccaga acggcatgga cctcgggcac ca
//
LOCUS       DASWGA010000725         1758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_211229, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000725 DASWGA010000000
VERSION     DASWGA010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211229"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..433
                     /locus_tag="VF991_16995"
     CDS             59..433
                     /locus_tag="VF991_16995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558195.1"
                     /translation="MRIWTGEDQNSHAEEGWIELEPGAHGDLLSDKLATSQTSFQETK
                     AGGTLAWHTAPVRQLVITLSGTLDFQTRGGQHFTIRPGEILLAEDTAGGGHTWKLVDD
                     QPWRRVYVVLGHGVAVPFKSAK"
     gene            453..>1758
                     /gene="mqo"
                     /locus_tag="VF991_17000"
     CDS             453..>1758
                     /gene="mqo"
                     /locus_tag="VF991_17000"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008924 - malate dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HEX9558196.1"
                     /translation="MSDSAAVTDADIVLVGAGTMSTTLAVFLKELQPHLRLEIIERMP
                     GEAQESSGAWNNAGTGHAANCELNYTPMRKDGSVDISRALEVNVEFDMSRQFWSYLIR
                     KGAIASPDSFIHPVPHMSFVIGAERAAFLKKRHAAMSAHHCYRGMEYSEDHKQIAEWA
                     PLIMEGRDPNQVVAATRMVTGADVNYGALTTNLMNYLKGQERFAVHFSQEVTDLRRRP
                     GGGWQLDVRDEKNGGTRRIGANYVFLGAGGAALSLLQKSDIPEAKGFAGFPVSGIWLR
                     CGKPEVAERHLAKVYGMAAAGSPPMSVPHLDTRIIDGKRWVLFGPYAGFSTKFLKHGS
                     LLDLFRSVKWNNIGPLLAVARDNFDLTKYLVGQVLQSSAHRFATLREFYPLARREDWQ
                     LEVAGQRVQIIKRDPRHGGILEFGTELVEAADKSLVALLGASP"
BASE COUNT          316 a          582 c          582 g          278 t
ORIGIN      
        1 actacggtcg tccacactgg tttttgcagg atgtggggat ggcgcaatga tccgatgcgt
       61 gcggatttgg accggcgaag accagaattc gcatgccgag gagggttgga tcgagctcga
      121 acccggcgcc cacggtgacc tgttgagcga caagctggcg acgtcgcaga cgtccttcca
      181 ggaaaccaag gcgggcggca cgctggcctg gcacaccgcg ccggtgcgcc agctcgtcat
      241 caccctgtcg ggcacgctcg acttccagac gcgcggcggc cagcacttca cgatccggcc
      301 gggcgagatc ctgctggccg aggataccgc gggcggcggc catacctgga aactggtgga
      361 cgatcagccg tggcggcgag tctatgtcgt gctgggacac ggcgtggccg tgccattcaa
      421 atcggccaaa tagagccttc gagggaaatc gcatgagcga cagcgccgcc gtcaccgatg
      481 ccgacatcgt cctggtcggc gccggcacca tgagcacgac gctggccgtt ttcctgaagg
      541 agctgcagcc ccatctccgg ctcgaaatca tcgagcgcat gccgggtgaa gcgcaggaaa
      601 gctccggcgc ctggaacaat gccggcaccg gccacgccgc caactgcgag ctgaactaca
      661 cgccgatgcg caaggacggc agcgtcgaca tctcgcgcgc gctcgaggtc aatgtcgaat
      721 tcgacatgtc gcgccagttc tggtcgtacc tgatcaggaa gggggcgatc gcctcgcccg
      781 attccttcat ccatccggtg ccgcacatga gcttcgtgat cggcgccgag cgcgcggcct
      841 tcctcaagaa gcgccacgcc gcgatgagcg cgcaccattg ctaccgcggc atggaatatt
      901 cggaggatca caagcagatc gccgaatggg cgccgctgat catggagggc cgcgacccca
      961 accaggtcgt cgccgccacc cgcatggtga ccggcgccga cgtgaactac ggcgcgctca
     1021 ccaccaacct gatgaactac ctgaaaggcc aggagcgctt cgccgtccac ttctcccagg
     1081 aggtgaccga cctgcgccgc cggccgggcg gcggctggca gctcgacgtc agggacgaga
     1141 agaacggcgg cacgcgccgg atcggcgcga actacgtctt cctgggcgcg ggcggcgcgg
     1201 cgttgagcct gctgcagaag tccgacatcc ccgaggccaa gggcttcgcc ggcttcccgg
     1261 tgagcggcat ctggctgcgc tgcggcaagc cggaagtggc cgagcggcat ctggccaagg
     1321 tgtacggcat ggccgccgcc ggctcgccgc cgatgtcggt gccccatctc gacacccgca
     1381 tcatcgacgg caagcgctgg gtgctgttcg ggccctatgc cggcttctcg accaagttcc
     1441 tcaagcacgg ctcgctgctc gacctgttca ggtccgtcaa atggaacaat atcgggccct
     1501 tgctggcggt cgcgcgggac aacttcgatc tgaccaagta tctcgtcggc caggtgctcc
     1561 aatcctcggc gcatcggttc gccacgctcc gggagttcta tccgctcgcc cgccgggagg
     1621 actggcagct ggaagtggcg gggcagcgag tgcagatcat caaaagggac cctcggcacg
     1681 gcgggatcct ggaatttgga acggaactgg tcgaggcggc ggacaagtcc ctcgtcgcgc
     1741 tgctcggagc ctcgcccg
//
LOCUS       DASWGA010000726         3083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2110114, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000726 DASWGA010000000
VERSION     DASWGA010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3083
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2110114"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VF991_17005"
     CDS             <1..406
                     /locus_tag="VF991_17005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003531115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HEX9558197.1"
                     /translation="ILESEGVRESSIQRAEGEKQSAILTAEGRREAAFRDAEARERLA
                     QAEAKATAVVAEAIAGNGVQATNYFLGTKYVEALAKMGSSTNSKVFFLPVEAAGVMAS
                     IAGIGELAKEAQARGAAAEVVGRPRGSVPTSG"
     gene            411..854
                     /locus_tag="VF991_17010"
     CDS             411..854
                     /locus_tag="VF991_17010"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEX9558198.1"
                     /translation="MSFKIIFWYWWALAAVLLIFEMMLPGVVFLFLAIGAAAAGVVLL
                     VAADLSLELQLVIFAVVAVASAVGLRPTLRRLQSRDTLPNTLNARGDSLVGKTIVLDA
                     PILGGQGRVKLGDGSWTVTGPDMAAGSRVRVAAVNGTELRVEPAP"
     gene            complement(947..1666)
                     /locus_tag="VF991_17015"
     CDS             complement(947..1666)
                     /locus_tag="VF991_17015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558199.1"
                     /translation="MRRHGLLGAILLLLACQAGPALARDELVTSTRSASGEPVAYILT
                     SKPGTPAYAVILMPGGQGRVAPRMEGGKLVFAGGGNFLIRSRELFADGRFVAVSTDAS
                     STPERMLTIMRDLEARYGKIPIYLIGTSRSSETTMALAKPLDGIAAGFVHTSSMNGIA
                     GFDPRGLKSRHLIVLHTMDACRVTSPSAGIASHRKYGTELIEMSGGTSTGDDCEAYAH
                     HGYNGIEQQTVDRIKGWIAKP"
     gene            complement(1663..2601)
                     /locus_tag="VF991_17020"
     CDS             complement(1663..2601)
                     /locus_tag="VF991_17020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX9558200.1"
                     /translation="MATYELHSSPETCHWGYFDSQLKPSLSIKSGDIATIHCVSGAAE
                     ILPGEPFNVLPEHREILAKLKPHLGRHILTGPVHVEGAERGDALAVEVLDIKFRTNWG
                     WNVQRPLMGTLPEDFPFYRLTHLPIDSNRGVCTLPWGAEITLKPFFGIMGVAPPPEWG
                     QCSSIEPRAFGGNIDNKHFNVGTTVYLPVFAEGGLFSTGDGHGVQGDGEVNLTALETS
                     LSGTFRFTVRKDMKLNNPRAETATHWITHGFDPDLDDAAKEALRDMIRLISAKTGLAA
                     ADAYMLCSLQADLHVTQTVDGNKGIHCMIDKKLLGE"
     gene            2676..>3083
                     /gene="rlmJ"
                     /locus_tag="VF991_17025"
     CDS             2676..>3083
                     /gene="rlmJ"
                     /locus_tag="VF991_17025"
                     /inference="COORDINATES: protein motif:HMM:NF016278.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEX9558201.1"
                     /translation="MNYRHGYHAGNFADILKHTALCELLRLLTAKDKKLFVLDSHAGA
                     GGYDLAGGQARRTAEAEAGIVRLAAAPRAAMPPAIARYRAAVAAYDRKFGRSTDGPRR
                     YPGSPRLIRASLRPGDRFVACELHAEEALALKRE"
BASE COUNT          472 a         1012 c         1082 g          517 t
ORIGIN      
        1 catcctcgag tccgagggcg tacgcgaatc gagcatccag cgcgccgagg gcgagaagca
       61 atcggccatc ctgaccgccg agggccgccg cgaggctgcc ttccgtgatg ccgaggcgcg
      121 cgagcgtctg gcgcaggccg aggccaaggc gaccgccgtg gtggccgagg cgatcgccgg
      181 caacggcgtg caggcgacca actacttcct cggcaccaag tatgtcgagg cgctggccaa
      241 gatgggatcc agcaccaatt ccaaggtctt cttcctgccc gtcgaggcgg cgggcgtgat
      301 ggcctcgatc gccggcatcg gtgagctcgc caaggaggcg caggcgcgcg gcgcggcggc
      361 cgaggtggtg ggcaggccgc gcggctcggt tcccaccagc gggtgagatc atgagcttca
      421 agatcatctt ctggtactgg tgggcgctcg ccgcggtgct gctcatcttc gagatgatgc
      481 tgccgggcgt ggtcttcctc ttcctggcga tcggcgcggc ggcggcaggt gtcgtcctgc
      541 tggtggccgc cgacttgtcg ctcgaactgc agctcgtgat cttcgccgtc gtcgcggtgg
      601 cctcggcggt cggtctgcgg ccgactctgc gccgcctgca gagtcgcgat acgctgccca
      661 acacgctcaa cgcccggggc gacagcctgg tcggcaagac gatcgtgctc gacgcgccga
      721 tcctgggcgg ccaggggcgc gtcaagctgg gcgacggaag ctggaccgtg accggccccg
      781 acatggcggc cggcagcagg gtgcgcgtcg ccgccgtcaa cggcaccgaa ctcagggtcg
      841 aaccggcgcc ctagagcgtt cggtgtcatc ccgagcgata gcgagggacc tttaatcggc
      901 gtcgcgaaag gtccctcgct atcgctcggg ataacatcgt tttcgatcag ggcttggcga
      961 tccacccctt gatcctgtcg acggtctgct gctcgatgcc gttgtagccg tggtgcgcat
     1021 aggcttcgca gtcatcgccg gtcgacgtgc cgccgctcat ctcgatcagc tcggtgccat
     1081 attttcgatg ggacgcgatg ccggcggagg gactggtcac gcggcaggcg tccatcgtgt
     1141 gcaggacgat gaggtggcgg ctcttcagcc cgcgcggatc gaagccggcg atgccgttca
     1201 tcgacgaggt atggacgaag cccgcggcga tgccgtcgag cggcttggcc agcgccatgg
     1261 tggtctcgct gctgcggctg gtgccgatca ggtagatcgg gatcttgccg tagcgcgcct
     1321 cgaggtcgcg catgatcgtg agcatgcgtt cgggcgtcga gctcgcatcc gtcgagacgg
     1381 cgacgaagcg gccgtcggcg aacagctcgc gcgagcggat caggaaattg ccgccgcccg
     1441 cgaacaccag cttgccgccc tccatgcggg gagcgacgcg gccttgcccg cccggcatca
     1501 ggatcacggc ataggccggc gtgccgggct tgctggtcag gatgtaggca acgggctcgc
     1561 cgctggcgga ccgcgtcgac gtcaccagtt cgtcgcgcgc cagcgccggc ccggcctggc
     1621 acgcgagcag gagcaggatc gcgccaagga gaccgtgtcg cctcattcgc ccaaaagctt
     1681 cttgtcgatc atgcagtgga tacccttgtt gccatccacg gtttgggtga cgtgcaggtc
     1741 ggcctgcagg ctgcacagca tgtaggcgtc ggcggcggcc aggcccgtct tggcgctgat
     1801 cagccggatc atgtcgcgca acgcctcctt ggcggcgtcg tcgagatccg ggtcgaagcc
     1861 gtgggtgatc cagtgcgtcg ccgtctcggc tcgcggattg ttgagcttca tgtccttgcg
     1921 cacggtgaag cggaaggtgc cggagagcga cgtctcgagc gccgtcaggt tgacctcgcc
     1981 gtcgccctgc acgccgtggc cgtcgccggt cgagaacagg ccgccctcag cgaacaccgg
     2041 cagatagacc gtcgtgccga cattgaagtg cttgttgtcg atgttgccgc cgaaggcgcg
     2101 cggctcgatc gagctgcact ggccccattc cggcggcggc gccacgccca tgatgccgaa
     2161 gaacggcttt agcgtgatct cggcgcccca cggcagggtg cagacgccgc ggttggaatc
     2221 gatcggaagg tgggtcaggc gatagaacgg aaagtcctcg ggcagggtgc ccatcaacgg
     2281 ccgctgcaca ttccagcccc agttggtgcg gaacttgatg tcgagcacct cgaccgccag
     2341 cgcgtcgccg cgctcggcac cctcgacatg gaccgggccg gtcaggatgt ggcggccgag
     2401 atgcggtttc agcttggcca ggatctcgcg atgctcgggc agcacgttga acggttcgcc
     2461 gggcaggatc tcggccgcgc cggagacgca gtggatggtg gcaatgtcgc ccgacttgat
     2521 gctgagcgag ggttttagct ggctgtcgaa atagccccag tggcaggtct cgggcgaaga
     2581 atgcagctca tacgtagcca tcgcagcctc cctttgcctc ccggttgaag cacagaccgt
     2641 gcccccaaat ccatcggcga tgctataggc ctgccatgaa ctaccgccac ggctatcacg
     2701 ccggcaactt cgccgacatc ctgaagcaca ccgcgctttg cgagctgctg cgcctgctga
     2761 cggccaagga caagaagctg ttcgtgctcg acagccatgc cggcgccggc ggctacgatc
     2821 ttgccggcgg acaggctcgg cggacggcag aggccgaggc ggggatcgtc cggctggccg
     2881 cggcgccgcg cgccgccatg ccgcccgcta tcgcccgcta ccgcgccgcg gtggccgcct
     2941 acgaccgcaa gttcggccgg tcgactgacg gccccaggcg ttatccgggc tcaccgcggc
     3001 tgatccgggc cagccttcgg ccgggcgacc gcttcgttgc ctgcgagctc catgccgagg
     3061 aggcgctggc gctcaagcgc gag
//
LOCUS       DASWGA010000727         1694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2110262, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000727 DASWGA010000000
VERSION     DASWGA010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2110262"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1541)
                     /locus_tag="VF991_17030"
     CDS             complement(<1..1541)
                     /locus_tag="VF991_17030"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEX9558202.1"
                     /translation="MSDPKKLFVALFEPRRIALIGASADEKKTTSRPQRFLRKHGFSG
                     EILPVNPSRSEILGERAYKDLDAIAGDIDHAYILLNGKDAVAALAACGRRGVKVASIL
                     AGGFADAGAAGASLQDDLARIVRESGVRLVGPNSIGTVSTDPPMALTANAAFAVDKLR
                     RGSWAVVSQSGSLIGALLSRADARGIGFSRLISVGNEVDLAVGEIANLVVDDPKTNAI
                     LLFMETLRDGERLAHAARRAHAAGKPVIAYKLGRSEIGQELAKSHTGAIAGSDATFDA
                     FCRRHGIARVSMFESLVDVPALLVDRPPACGKRVAVATTTGGGAAMVVDNMAMAGLDI
                     VGPPQGLVDWLKPLGIAAGDGKLVDLTLAGAKPEIVAGTIERLLADDGNDAAIFVVGS
                     SAQFNPELAVEPLLKFARSAKPFAVSLTPSAEKSLALLTAAGVPAFRHPESCAEAMAL
                     CLLRPSPQPVPALADPARATLDALSAGRVSGFDERRAADLFAVLGVPMAKAMAIPDAK
                     RIAAAV"
BASE COUNT          267 a          600 c          574 g          253 t
ORIGIN      
        1 acggcggcgg cgatgcgctt ggcgtcgggt atggccatcg ccttggccat gggcacgccc
       61 agcacggcaa agagatcggc ggcgcggcgc tcatcgaagc ccgagacacg acccgccgac
      121 agcgcgtcga gcgtggcacg cgccggatcg gcgagtgccg gcacgggctg cggcgagggg
      181 cgcagcaggc agagcgccat ggcttcggcg caggattcgg gatggcggaa tgccggcacg
      241 ccggctgccg tcagcagggc gagcgacttc tcggccgacg gcgtcagcga taccgcgaag
      301 ggcttggccg accgggcgaa cttcagcagc ggctcgaccg cgagctcggg attgaactgc
      361 gccgaggagc ccaccacgaa gatcgcggca tcgttgccgt cgtcggccag cagccgctcg
      421 atcgtgcccg ccacgatctc gggcttggcg ccggccagag tgagatcgac cagcttgccg
      481 tcccccgcgg cgatgccgag cggttttagc cagtcgacca gcccctgggg cggacccacg
      541 atgtcgagcc cggccatcgc catgttgtcg accaccatgg ccgcgccgcc gcccgtcgtg
      601 gtggcgacgg cgaccctctt gccgcacgcc ggcggccgat cgaccagcag cgccggcaca
      661 tcgaccagcg attcgaacat cgatacgcgg gcaatgccgt gacggcgaca gaaggcgtcg
      721 aacgtggcat ccgacccggc gatggcgccg gtgtgggact tcgccagctc ctggccgatt
      781 tcggaacgac cgagcttgta ggcgatcacc ggcttgcccg ccgcatgggc ccgccgcgcc
      841 gcgtgcgcca gccgctcgcc gtcgcgcagg gtctccatga acagcaggat ggcattcgtc
      901 ttgggatcat cgaccaccag gttggcgatc tcgccgaccg ccagatcgac ctcgttaccg
      961 accgagatca gccgcgagaa gccgatgccg cgcgcatccg ctcgtgagag cagcgccccg
     1021 atgagactgc cgctctggct gaccaccgcc cagcttcccc tacgcagctt gtcgacggcg
     1081 aaggcggcat tggcggtgag cgccatcggc ggatcggtgc tcaccgtgcc gatgctgttg
     1141 ggcccgacca ggcggacgcc gctctcgcgt acgatgcgcg ccagatcgtc ctgcagcgaa
     1201 gcacccgccg cgcccgcatc ggcgaagccg ccggccagga tcgacgccac cttgacgcca
     1261 cgcctgccgc acgccgccaa tgctgcgacg gcatccttgc cgttcaacag gatgtaggcg
     1321 tgatcgatgt cgcccgcgat ggcgtcgaga tccttgtaag ccctctcgcc caggatttcg
     1381 ctgcgcgacg gattcacggg caggatctcg ccggaaaaac cgtgcttgcg cagaaagcgc
     1441 tgcggccgcg aggtcgtctt cttctcatcg gccgaggcgc cgatcagggc gatgcgcctg
     1501 ggttcaaaca gggcgacgaa cagtttcttg ggatcgctca tgccgcgagt atactcggcg
     1561 catgttgcct cgccgcactt tcgttgccgc agcgcttgcc gccgctttgc cggcgcgcgc
     1621 acaggcctgg cctgccaagc ccatccggct cgtcgtgcct tatgcgccgg gcggcacgac
     1681 ggatgtcatc gccc
//
LOCUS       DASWGA010000728         2145 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2362299, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000728 DASWGA010000000
VERSION     DASWGA010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2362299"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VF991_17035"
     CDS             complement(<1..569)
                     /locus_tag="VF991_17035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEX9558203.1"
                     /translation="MRAPRLPIVLLGLSLATTQAAVAEPIDTTGAIQCEASGFSIDPD
                     PKGTNLRSAPRVNAPVIGRLAPRTRITPVEIVGVTFDIVGSKDGWLLIKNGNPEPDFM
                     LGPANAADGRGWVSGRLVGTTLAAISLRIAPRWDAPVVASFAMPGSSPVSVVVSTVHG
                     CRGKYAEVTGTPINGKTVRGWSYSPCSSQL"
     gene            complement(575..976)
                     /locus_tag="VF991_17040"
     CDS             complement(575..976)
                     /locus_tag="VF991_17040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HEX9558204.1"
                     /translation="MAAQETKERKLAAPAVSQETQAYWDAAAKGKLLVRKCTSCGQLH
                     HYPRTICPFCFSDKTEWIEASGKGTIYSYSVMRRAPVPYAMAYVTLAEGPRMVTNIVD
                     CDFDKLKCEQPVKLVFKPTDGGPPLPMFTPV"
     gene            complement(980..>2145)
                     /locus_tag="VF991_17045"
     CDS             complement(980..>2145)
                     /locus_tag="VF991_17045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HEX9558205.1"
                     /translation="KGKAYIAGIYEHPTRLAKDISLAQIHAQVAKGALEDAGLTKDDV
                     DGYFCAGDAPGLGPMSMVEYMGLKPRHVDSTDIGGASYVLHVGHAAEAIAAGKCKVAL
                     ITLAGRPRADGMATGTVPRTRGGTPTPDDPFEFPYGPTVVNMYGMCAMRHMYEFGTTS
                     EQLAWIKVAASHHAQYNEHALLRDVVTVEEVVNSPMISDPLHRLDCCVITDGGGAIVV
                     VAPEIAAKLKRPKVKLIGAGEFVKTQMGGKVDLTYSGARVSGAAAFAEAGVKPSDMKY
                     VSIYDSFTITVLMQLEDLGFAEKGKGGKLVADGNLISGTGKLPFNTDGGGLCSNHPGN
                     RGGLTKVLEAVRQLRGEAHPKVQVKNCNLALAHGTGGSLGLRHGSATVILERE"
BASE COUNT          325 a          727 c          715 g          378 t
ORIGIN      
        1 agctggctgg aacagggcga atacgaccag ccgcggacgg tcttgccgtt gatgggtgtg
       61 ccggtcacct cggcgtactt cccgcgacaa ccgtggacgg tggacacgac cacactcacc
      121 ggcgacgagc cgggcatggc aaagctggcg acgacgggag cgtcccagcg cggcgcgatg
      181 cgcagggata ttgcggccaa cgtggtcccg accagccgtc ccgacaccca gccccgccca
      241 tccgcggcat tggccgggcc gagcatgaaa tccggctctg gattgccgtt cttgatcagc
      301 agccatccgt ccttcgagcc gacgatgtcg aacgtcacgc cgacgatttc aaccggcgtg
      361 atgcgcgtgc gcggcgcaag tcggccgatc acaggcgcat tgacgcgcgg tgcgctcctg
      421 aggttggtcc ccttgggatc tggatcgatc gagaagcccg acgcctcgca ttgtatggcg
      481 cccgttgtgt cgatgggttc ggcgaccgcg gcctgcgtcg tggccaggct gaggcccagc
      541 agcacgatcg gcaggcgcgg cgcgcgcatc gccgtcagac cggcgtgaac atcggcagcg
      601 gcgggccgcc gtcggtcggt ttgaagacca gcttcaccgg ctgctcgcat ttcagcttgt
      661 cgaagtcgca gtcgacgatg ttggtcacca tgcgcggacc ctccgccagc gtgacgtagg
      721 ccatggcgta gggcaccggc gcgcggcgca tgacgctgta ggaatagatc gtacccttgc
      781 ccgaggcctc gatccattcg gtcttgtcgc tgaagcagaa cggacagatc gtgcgcggat
      841 agtgatgcag ctggccgcag ctcgtgcatt tgcgcaccag cagcttgccc ttggcggcgg
      901 cgtcccaata ggcctgcgtc tcctggctga cagccggcgc cgccagtttg cgttccttgg
      961 tttcctgggc ggccatgatc tactccctct ccagaatgac ggtggcgctg ccgtgacgca
     1021 ggccgagcga gccgcccgtg ccgtgcgcca gcgcaagatt gcagttcttc acctgcacct
     1081 tgggatgcgc ctcgccgcgc agctgccgca cggcctccag caccttggtg agcccgccgc
     1141 gattgcccgg atggttgctg cagagcccgc cgccgtcggt gttgaagggc agcttgcccg
     1201 tccctgagat caggttgccg tcggccacca gcttgccgcc cttgcccttc tcggcgaagc
     1261 ccagatcctc gagctgcatc agcacggtga tggtgaagct gtcgtagatc gacacgtatt
     1321 tcatgtccga gggcttcacg cccgcctcgg cgaaggccgc cgcgccgctg acgcgcgcgc
     1381 ccgagtaggt gaggtcgacc ttgccgccca tctgcgtctt cacgaattcg cccgcgccga
     1441 tcaacttgac cttgggtcgc ttgagcttgg ccgcgatctc cggcgccacc acgacgatgg
     1501 cgccgccgcc gtcggtgatg acgcagcagt cgagccggtg cagcgggtcg gagatcatcg
     1561 gcgagttcac cacctcctcg accgtgacca cgtcgcgcag cagcgcatgc tcgttgtatt
     1621 gcgcgtggtg cgaggccgcg accttgatcc aggcgagctg ctcggatgtc gtgccgaact
     1681 catacatgtg gcgcatggcg cacatgccgt acatgttcac caccgtcggc ccgtagggga
     1741 actcgaaggg gtcgtcgggc gtcggcgtgc cgccacgggt gcgcggcacc gtgccggtcg
     1801 ccatgccgtc ggcgcgcggc cggccggcca gggtgatcag cgccaccttg cacttgcccg
     1861 cggcgatcgc ctcggcggcg tggccgacat gcagcacgta ggacgcgccg ccgatgtcgg
     1921 tcgaatcgac gtggcgcggt ttcagcccca tgtactcgac catcgacatc ggccccaggc
     1981 cgggcgcgtc gccggcacag aaatagccgt cgacatcgtc cttggtgagg ccggcatcct
     2041 ccagcgcccc cttggccacc tgggcgtgga tctgggccag cgagatgtcc ttggcgagcc
     2101 gcgtcggatg ctcgtagatg ccggcgatat aggctttacc cttga
//
LOCUS       DASWGA010000729         1871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_329648, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000729 DASWGA010000000
VERSION     DASWGA010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329648"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VF991_17050"
     CDS             <1..207
                     /locus_tag="VF991_17050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558206.1"
                     /translation="VRDEPVTLQGWDGYALDIEDADGAVVMMRTYIVKDRLYRLLVTA
                     KNDEASKSAATRFLDSLRLAETRQ"
     gene            291..1676
                     /locus_tag="VF991_17055"
     CDS             291..1676
                     /locus_tag="VF991_17055"
                     /inference="COORDINATES: protein motif:HMM:NF033551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HEX9558207.1"
                     /translation="MTKQEERDLFGELAQQEAPEGDPGLPRYVEARRDEIVFERFEFD
                     ELIGADHPARVIWAYVEQVDLSALYEQIKARAHTPGRPAADPRVMLAVWLYACVEAVG
                     SARQLERSTEQHHGFRWLRGGVPLNHHLLSDFRWQAAEVADRLLTQGVTALWSEGLVS
                     LASLSHDGIRIRASAGASSFRRLATLERLLGEVEERIKRLRQEIDADPDASNRRLQAA
                     RERAARERQERIGAALEALRTLQAEQAAAKQEDPAEPPDGQAPPSDDAKSKKKEPRWS
                     TTDSQARVMRMPDGGWRPAYNVQLTADLDSGVIVGLGVDTTGSDGGLMAPAAEQVEQR
                     YGHRPQRFLGDGGFTRLDDIAALARKAITVFCPLKPRRNPNNDPAKPRYGDPPEIADW
                     RRRMVDDAAAGPASWMRRRGEHERVNANFRRQGLQQFNVRGSFKVKTVSLLHALANNI
                     MAAARLRAAAA"
BASE COUNT          340 a          589 c          652 g          290 t
ORIGIN      
        1 gtgcgcgacg agcccgtgac cttgcagggc tgggacggct atgcgctcga catcgaggat
       61 gccgacggcg ccgtcgtcat gatgcgcacc tacatcgtga aggaccggct ttaccgcctg
      121 ctggtcaccg ccaagaacga cgaggcgagc aagagcgccg cgacccgctt cctcgattca
      181 ctgagattgg ccgagacacg gcagtagagt cacgtcgtcc tgagagcttg tgattttttg
      241 ctggtgcggg cgaggagaat ttgattcggt ggatcgaggc ggaggtctcg atgacgaaac
      301 aagaagaacg cgatctgttc ggcgagttgg cgcagcagga agcgccggag ggcgatcctg
      361 gactgccgcg ctatgtcgag gccaggcggg acgagatcgt gttcgagcgc ttcgagttcg
      421 atgagctgat cggagccgac catccggctc gggtgatctg ggcttatgtc gagcaggtcg
      481 acctgtcggc gctgtacgaa cagatcaagg cgcgcgctca tacgccgggc cggccggcgg
      541 ccgatccgcg ggtgatgctg gcggtgtggt tgtacgcctg cgtggaggca gtgggcagcg
      601 cgcgtcagct cgagcgatcg acggagcagc atcatggctt ccgctggctg cgcggcgggg
      661 tgccgttgaa ccaccacctt ctgtcggact tccgctggca ggcggcggag gtggcggacc
      721 gactgctgac gcaaggcgtg acggcgttgt ggtcggaggg cctggtgagc ttggcgtcgc
      781 tgagccacga cggcatccgc atccgggcgt cggcgggcgc gtcgagcttc cgccggctgg
      841 cgacgctgga gcgcctgctg ggcgaggtcg aggagcgcat caagcggctg cggcaggaga
      901 tcgatgccga tcccgatgcc tcgaaccgcc gcctgcaggc ggcgcgtgag cgggcggcac
      961 gggaacgaca ggagcggatt ggggcggcgc tggaagcctt gcggacgctg caggccgaac
     1021 aggcggcggc caagcaggag gacccagccg agccgcccga tggtcaggca ccgccatcgg
     1081 acgatgccaa gagcaagaag aaggagccgc gttggtcgac caccgatagc caggcgcgcg
     1141 tcatgcgcat gccggatggc ggctggcggc cagcctacaa cgtacaactc acggccgatc
     1201 tcgatagcgg cgtcatcgtc ggcctcggtg tcgacacgac cggcagcgat ggcggcctga
     1261 tggcgccggc cgccgagcag gtcgagcagc gttacggcca ccgtccgcaa cgcttcctgg
     1321 gcgacggcgg cttcaccagg ctcgacgaca tcgcggcgct ggcgcgcaag gccatcaccg
     1381 tgttctgtcc cctcaagccc aggcgcaacc ccaacaacga cccggccaag ccgcgctatg
     1441 gcgacccgcc cgagatcgcc gactggcgcc gtcgcatggt cgacgacgct gcagccggcc
     1501 cggcaagctg gatgcgacga cgaggtgaac atgagcgcgt caacgccaac ttccgccgcc
     1561 aaggtctgca acagttcaac gtcaggggca gcttcaaggt caaaacggtc agcctgctgc
     1621 atgccctggc caacaacatc atggctgctg cccgcctcag ggcggcggca gcctgaggcc
     1681 gacgcctttg cgatcgacct cgccaatcgt cgacgcctaa atggatcaca agctctgagc
     1741 gtaagcgaag gacctcatcg ccgcttgcca ccggcatgag atccttcgct gcgctcagga
     1801 tgacagatag gccttcttgt cgactaagac gggccttcat tcaacgccgc tctatgcact
     1861 ccctcaaaat c
//
LOCUS       DASWGA010000730         5139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2485863, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000730 DASWGA010000000
VERSION     DASWGA010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5139
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2485863"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VF991_17060"
     CDS             complement(<1..401)
                     /locus_tag="VF991_17060"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX9558208.1"
                     /translation="MNRPVPPVWRSILYVPGNVAKFIDKAHERGADCVLVDLEDSVTL
                     AEKPQARAMLPETLKKVARGGADVAVRINRPLRLAIPDIEAAVRPGLAALFVTKTEGV
                     QHLKLLDEAVSELERERGMPVGGVGFGAMIE"
     gene            complement(398..1633)
                     /locus_tag="VF991_17065"
     CDS             complement(398..1633)
                     /locus_tag="VF991_17065"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007569421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9558209.1"
                     /translation="MAKKPAKRSFDPAARGPLDGVRVVDLSRLVAGNILTLQLADFGA
                     EVIKVEPPEGDTLRSWRVKGIETAWKVYSRNKKSVALDLRSDAGRAIVRELAASAQIL
                     VESFRPGVLEDMGLAPAELHKRNPKLVIVRISGWGQDGRYRHKPGFGTLIEGYSGFAS
                     MNGFADREPVLPPMYLADAMAALYGYGAVMVALREVEMNAGTGQTLDLPLFDPLFSVL
                     GPQAANHKLTGEVKVRSGSRSTNAAPRNVYQTSDGHWVCLSASTQGMAERVLAKIGRP
                     ELVKDPRFATNIERVKNGEELDRIIGGFIAQRDLLANLEFFDAAGVTIGPVYDIAQIV
                     QDDYVLEREALIEIPDEEMGELPTHPVVPRLSGTPGALRSAAPRIGEHNEALLKPLLG
                     DAEYDKLCQAGAISRGKKK"
     gene            complement(1626..2294)
                     /locus_tag="VF991_17070"
     CDS             complement(1626..2294)
                     /locus_tag="VF991_17070"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9558210.1"
                     /translation="MGEDIRLKSKAGEIGAYLATPKGTPKAGVVVIQEIFGVNHHIKA
                     VTDKLAADGYLALAPHFFDHVKKGVDLGYTPDTIAEGRKYVTELGFDKPVQDVEAAIE
                     ELKRRGARKVAVIGFCWGGTITWLAATRLKPDAAIGYYGGGIHGAKNEKPQVPTMLHF
                     GDKDMHIPMTHVNEVRKLHPNVLVYDYPADHGFHCDERGSYDAAAAKQAMARTLEFMA
                     KHVG"
     gene            2385..3008
                     /locus_tag="VF991_17075"
     CDS             2385..3008
                     /locus_tag="VF991_17075"
                     /inference="COORDINATES: protein motif:HMM:NF016207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HEX9558211.1"
                     /translation="MYVPKHFEGDEATGRQIMQAHGWALLMTADADAAPVATHLALVW
                     QDDGSPHGCLLGHVARANGHWKLFARGAESLALFWGPHAYVSPNWYTPGIKVPTWNYV
                     TVHAYGRPQVIEDTEGVLGVLAKLAAVYEGTGDGAWTLGRLPPGNAEAQTKGIVAFRI
                     PLARVETKLKLSQNRELEDRHRVIAKLEASDSQDSQATAKWMKRVLP"
     gene            3062..4942
                     /locus_tag="VF991_17080"
     CDS             3062..4942
                     /locus_tag="VF991_17080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoX family phosphatase"
                     /protein_id="HEX9558212.1"
                     /translation="MDKASNAPSIGELIEQRLNRRDAMRGLLGAGAVATFSQIPVAMA
                     QDSGPSTLTFKELAHTLDDKQHVAEGYDMQVVIRWGDPVIAGAPAFDPANLTAAAQEK
                     QFGYNNDYLGLYPLPAGGRANDRFLMVANHEYTNTNLMFAGMGAGRDANLKASKDQVA
                     VEMAAHGGAVIEIVREAGAWKVVADSKYARRITATTPMEISGPAAGHDKLKTSADPTG
                     GKVLGMLNNCAGGSTPWGTWLTCEENFNSYFSADPAKTADADMNKRYGIAHTAYAWSR
                     HVDRFDLAKEPNEANRFGWVVEIDPYEPGTPPVKRTALGRFKHEGCTSALAKDGRVVF
                     YSGDDERFGYVYKFVTAKPWTPNDRAANKNLLDDGTLSVARFNAEGKVEWLPLVHGQG
                     PLTAENGFASQADVLIKTRLAADLLKPTPMDRPEDIETNPVNGRVYVVLTNNGARKPD
                     QVDRANPRAANDHGHILEIAPKDGDHANADGTWSIFLLAGKPGQDAGARYHRATSDNG
                     WLSCPDNIAFDSKGRIWIVTDGAPHAAGVADGVYGADTTGFGRALTRCFYQAPTGAEV
                     CGPIFTPDDTTFFLAVQHPGEDTGSTFEKPSTRWPDFKDGVPPRPAVVAITKKGGGVV
                     GS"
     gene            complement(4908..>5139)
                     /locus_tag="VF991_17085"
     CDS             complement(4908..>5139)
                     /locus_tag="VF991_17085"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HEX9558213.1"
                     /translation="SPKTMPPPTGYSQVAEVTSGKIVLIAGQVAHDPAGNLVGENDFA
                     AQVEQVFKNLDAAVCAVAGGETMSQPLRHPSW"
BASE COUNT          857 a         1750 c         1696 g          836 t
ORIGIN      
        1 tgctcgatca tggcgccgaa accgacgccg cccacgggca tgccgcgctc gcgctcgagc
       61 tcgctcaccg cctcgtcgag cagttttaga tgctgcacgc cctcggtctt ggtgacgaac
      121 agggctgcga gaccgggccg caccgccgct tcgatgtcag ggatcgccag ccgcagcggc
      181 cggttgatgc gcaccgccac gtcggcgccg ccgcgcgcga cctttttcag ggtctccggc
      241 agcatcgccc gcgcctgcgg tttctcggcc aaggtcacgc tgtcctcgag atcgaccagc
      301 acgcagtcgg cgccgcgctc gtgcgccttg tcgatgaatt tggccacatt gcccggcacg
      361 tagaggatcg agcgccagac gggcggaacg gggcggttca cttcttcttc cccctggaaa
      421 tggcgccggc ctggcagagc ttgtcgtatt cggcgtcgcc cagcagcggc tttagcagcg
      481 cctcgttgtg ctcgccgatg cggggtgccg cgctgcgcag cgcgcccggc gtgccgctca
      541 gccgcggcac caccggatgg gtcggcagct cgcccatctc ctcgtcgggg atctcgatca
      601 gtgcctcgcg ctcgagcacg tagtcgtcct gcacgatctg ggcgatgtcg tagaccgggc
      661 cgatggtgac gccggccgcg tcgaagaatt ccaggttggc taaaaggtcg cgctgggcga
      721 tgaagccgcc gatgatgcgg tcgagctcct cgccgttttt cacccgctcg atgttggtgg
      781 caaagcgcgg atccttgacc agttccggcc ggccgatctt ggccagcacg cgctcggcca
      841 tgccctgggt cgaggccgag aggcagaccc agtggccgtc gctggtctgg tagacgttgc
      901 gcggcgctgc attggtcgag cggctgccgg agcgcacctt gacctcgccg gtgagcttgt
      961 ggttggcggc ctgcgggccg agcaccgaaa acagcggatc gaacagcggc aggtcgagcg
     1021 tctggccggt gccggcgttc atctcgacct cgcgcagcgc caccatcacc gcgccgtagc
     1081 cgtagagggc ggccatcgcg tcggcgagat acatcggcgg cagcaccggc tcgcggtcgg
     1141 caaagccgtt catcgaggcg aagccgctat agccttcgat cagcgtgccg aagcccggct
     1201 tgtgacggta gcggccgtcc tggccccagc ccgagatgcg cacgatgacc agcttgggat
     1261 tgcgcttgtg cagctcggcc ggcgccagac ccatgtcctc cagcacgccg ggcctaaaac
     1321 tttcgaccag gatctgcgcc gaggcggcga gctcgcgcac gatggcgcgg ccggcgtcgg
     1381 agcgcaggtc gagggccacg ctcttcttgt tgcggctata aaccttccac gccgtctcga
     1441 tgcccttgac gcgccacgag cgcagcgtgt cgccctcggg cggctcgacc ttgatcacct
     1501 cggcgccgaa atcggcgagc tgcagcgtca ggatgttgcc ggcgaccagg cgcgacaggt
     1561 cgacgacgcg gaccccgtcg aggggcccgc gcgccgcggg atcgaagctt cgcttggccg
     1621 gctttttagc caacgtgctt tgccatgaac tccaaggtgc gggccatcgc ctgcttggcg
     1681 gctgccgcgt cgtagctgcc gcgctcgtcg caatggaagc cgtgatcggc cgggtagtcg
     1741 tagaccagca cgttgggatg gagcttcctg acctcgttca cgtgcgtcat cgggatgtgc
     1801 atgtccttgt cgccgaaatg cagcatggtc ggcacctgcg gcttctcgtt cttggcgcca
     1861 tggatgccgc cgccgtaata gccgatcgcc gcgtcgggtt ttagccgcgt cgccgccagc
     1921 caggtgatgg tgccgcccca gcagaagccg atgaccgcca ccttcctggc gccgcgccgc
     1981 ttcagctcct cgatcgccgc ctcgacgtcc tgcaccggct tgtcgaagcc gagctcggtc
     2041 acgtacttgc ggccttcggc gatggtgtcg ggcgtatagc cgaggtcgac gcctttcttg
     2101 acgtgatcga agaagtgcgg cgccagcgcc aggtagccgt cggccgcgag cttgtcggtg
     2161 acggccttga tgtggtggtt gaccccgaag atctcctgga tcaccacgac gccggccttg
     2221 ggggtgccct tcggtgtggc caggtaggcg ccgatctcgc cggccttgga ttttagacga
     2281 atatcctcac ccataagaat tcctcccggt tgcggccggc attggacatg gtaatgccgc
     2341 tgcgttcaac ccgtgcgcgc cggccaagcc gcagaaagaa aatcatgtac gttcccaagc
     2401 atttcgaagg cgacgaggcg accggccggc aaatcatgca ggcccatggc tgggcgctgt
     2461 tgatgaccgc cgatgccgat gcagcacccg tcgccaccca cttggcgctg gtctggcagg
     2521 acgacggcag cccgcacggc tgcctgctcg gccatgtggc gcgcgccaac gggcactgga
     2581 agctgttcgc gcgcggtgcc gagtcgctgg cgctgttctg gggcccgcac gcctatgtct
     2641 cgcccaactg gtacacgccg ggcatcaaag tgccgacctg gaactacgtc accgtgcacg
     2701 cctatggccg gccgcaggtg atcgaagaca ccgaaggcgt gctcggcgtg ctggccaagc
     2761 tggcggcggt ctatgaaggc acaggtgacg gcgcctggac tctcggccgt ctgccgcccg
     2821 gcaatgccga ggcgcagacc aagggcatcg tcgccttccg cattccgctc gcgcgggtcg
     2881 agaccaagct caagctcagc cagaaccgcg agctcgagga tcgccaccgc gtgatcgcca
     2941 aactcgaggc gagcgacagc caggactccc aggcaacggc aaagtggatg aagcgcgtgc
     3001 tgccgtaacg aaaatgacat cggacgccgc tacgtcacag ggattggcag gagagatcgg
     3061 catggacaag gctagcaatg cgccgtcgat cggcgaactg atcgaacagc gcctcaatcg
     3121 gcgcgacgcg atgcgtggtc tgttgggggc gggcgcggtc gcgacgttca gccagatacc
     3181 ggtggcgatg gcgcaggact ccggaccctc gacgctcacg ttcaaggagc tcgcgcacac
     3241 gctcgacgac aagcagcacg tagccgaagg ctatgacatg caggtggtga tccgctgggg
     3301 cgatcccgtg atcgccggtg cgccggcctt cgatcccgcc aacctgacgg ccgccgccca
     3361 ggaaaagcag ttcggctaca acaacgacta tctcggcctg tacccgctgc cggccggcgg
     3421 ccgcgccaac gaccgcttcc tgatggtcgc caatcacgaa tacaccaaca ccaacctgat
     3481 gttcgccggc atgggcgccg gccgcgacgc caacctcaag gcgtcgaagg accaggtggc
     3541 ggtcgaaatg gcggcacatg gcggcgcggt gatcgagatt gttcgcgagg ctggcgcctg
     3601 gaaggtcgtt gccgacagca agtatgcccg ccgcatcacc gccaccacgc cgatggagat
     3661 ctcgggtccg gccgccggcc acgacaagct caagacctcg gccgatccga cgggaggcaa
     3721 ggtgctgggc atgttgaaca actgcgccgg cggcagcacg ccgtggggca cgtggctgac
     3781 ctgcgaggag aacttcaaca gctacttcag cgccgatccg gccaagaccg ccgacgccga
     3841 catgaacaag cggtacggca tcgcccacac ggcctatgcc tggagccggc atgtcgatcg
     3901 cttcgatctc gccaaggagc ccaacgaggc caatcgcttc ggctgggtgg tcgagatcga
     3961 tccctacgaa cccggcacgc cgccggtgaa gcgcaccgcg ttgggccgct tcaagcatga
     4021 gggttgcacc tccgcgctcg ccaaggatgg ccgcgtcgtc ttctacagcg gcgacgatga
     4081 gcgcttcggg tatgtctaca agttcgtcac ggccaagccg tggactccca acgaccgcgc
     4141 cgccaataag aacctgctcg acgacggcac gctttccgtc gcccgcttca acgccgaggg
     4201 caaggtcgag tggctgccgc tggtgcacgg acagggcccg ctgacggcgg agaacggctt
     4261 tgccagccag gccgatgtgt tgatcaagac ccggttggcg gctgatctct tgaagccgac
     4321 gccgatggac cggccggaag acatcgagac caacccggtg aacggccgcg tctatgtcgt
     4381 gctgaccaac aacggcgcgc gcaaacccga ccaggtcgac cgcgccaacc cgcgcgccgc
     4441 caacgaccat ggccatatcc tcgagatcgc gcccaaggat ggcgaccacg ccaacgccga
     4501 cggcacttgg tcgatcttcc tgctggccgg caagcccggc caggacgccg gcgcgcgcta
     4561 ccatcgcgcg acctcggaca atggctggct gtcctgcccc gacaacatcg ccttcgacag
     4621 caagggccgc atctggatcg tcaccgacgg cgcgccgcac gccgcgggcg tcgccgacgg
     4681 cgtctatggc gccgacacga cgggcttcgg tcgcgcgctc acccgctgct tctaccaggc
     4741 gccgaccggc gcggaggtct gcgggccgat cttcacaccc gacgacacca ccttcttcct
     4801 cgccgtccag catcccggcg aggacaccgg ttcgaccttc gagaagccgt cgacgcgctg
     4861 gcccgacttc aaggacggcg tgccgcctcg cccggcggtc gtcgccatca ccaagaaggg
     4921 tggcggagtg gttggctcat agtctcgcct ccggcaacgg cgcagacggc ggcatcgagg
     4981 ttcttgaaca cctgctcgac ctgggcggcg aaatcgttct cgccgaccag gtttcccgca
     5041 ggatcgtgcg cgacctggcc ggcgatcagc acgatcttgc cgctcgtgac ctcggcgacc
     5101 tgggaatagc cggtgggcgg cggcatggtc ttggggctg
//
LOCUS       DASWGA010000731         7702 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1227838, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000731 DASWGA010000000
VERSION     DASWGA010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7702
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1227838"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1719
                     /locus_tag="VF991_17090"
     CDS             <1..1719
                     /locus_tag="VF991_17090"
                     /inference="COORDINATES: protein motif:HMM:NF006122.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9558214.1"
                     /translation="ERHGAGEKEREQDQPHATRLDRIRRRLYIDDMPRLSTAEATVET
                     LLHHGLDTVYALPGLHNDPLFDAFYHAAGRLRVIHPRHEQTAAYMALGAALATGKPQA
                     FAVVPGPGLLNAGAALLTAYGMNAPVIGLIGQIPQTDIDKGHGHLHEIHDQLGLMRHI
                     TKWAERIKSPQEAPTLVSQAIWHATSGRPRPVALECALDTWAKRAEVALAAAPLPLPP
                     ETIDDEAITAAAKVLGAAERPIIVVGGGALDAGADVIKLAEMLEAPVSSYRRGRGVVP
                     SSHRLAVDMPVGHRLWKEADAVLAIGTRFFIQNGSWGIDSNLKVVRLDIDPDEHDRLR
                     KPDVALVGDAAPQLRALTAALPKHNRPRHSRAQELRGHRAWLAERLSRLEPQVGFLKA
                     IRAALPEDGIFVDEVSQIGFASRVALPIEKPRTFLSPGYQDNLGWGFGAALGAKAAMP
                     DKKVLAIAGDGGFMYQVGELATAARHDLAVVVVVFDNGAFGNVKRIQQERYGNRLIAS
                     DLQNPDFCKLADSFGIASFKALDAKQLEAALQKAFALNAPALVWVPHGDMPSPWDMIM
                     MPKVRG"
     gene            complement(1828..2763)
                     /locus_tag="VF991_17095"
     CDS             complement(1828..2763)
                     /locus_tag="VF991_17095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015317426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9558215.1"
                     /translation="MNILVTGSSGWLGQTLVPRLRRDGHGVVGLDPEAGATTEIVGSV
                     VDRALVRRIIRAHGIEAIVHAAARHKPHIETHDNSEFVAVNVQGTLNLLEEAVAEGSK
                     VDRFVFTSTTSLMISQKIRDGRAGGAKEAMWIDETLSPLEPRNIYGVTKRAAEELCRL
                     FHHLHRLPILILRTARFFPEEDDMAHAIVQSGENTKANEFLFRRLTVEDTAEAHVVAL
                     DRAKALGFDTFIISAMTPFSPADCRELLADAPSVVARYFPDYREKYAKRGWTMFDSID
                     RVYDAGKAKRKLGFVCKTGFREVLDSLWSVAPSGA"
     gene            complement(2760..4100)
                     /locus_tag="VF991_17100"
     CDS             complement(2760..4100)
                     /locus_tag="VF991_17100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HEX9558216.1"
                     /translation="MADDDESDSLGGRLGRYAKVGASVGGLAAKLVGQRYLGWTLDRD
                     KHASELKAALGGLKGPLMKAAQLIATIPDALPPEYARELTQLQANAPAMGWAFVRRRM
                     ATELGSDWPSKFTKFDKEASFAASLGQVHHAILQDGTEVAVKLQYPDMASALQADLNQ
                     LKLVFAVGQRFDPAIRTDEIHAEITMRLREELDYRREAKHVALYRHILRDEANVHVPE
                     VVPSHSTDRLLTMTWLSGEPLLNWKSHSQEDKDRLAIQMFRTWYVPFYSYGVIHGDPH
                     LGNYTVRPDGSVNLMDFGCVRIFPPRFVRGSIELYRALMTDDLARAVAAYEDWGFSGL
                     THDMIAVLNRWAAFLYGPLMDDRPRRLTEGMVEGHGREMAQNVFGELRRMGGVRPPRE
                     FVFMDRAAIGLGAVFIHLRASINWHQLFESLIEGFDVEALAARQDAALKEAGLS"
     gene            complement(4103..5872)
                     /locus_tag="VF991_17105"
     CDS             complement(4103..5872)
                     /locus_tag="VF991_17105"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEX9558217.1"
                     /translation="MDAVLGELPTWNLSDLYSSPTGSDLDADLKRAAADSESFAKAYE
                     GKVASLDGKALGAAVARFEALSDLMGRIGSYASLYYAQDQADPERGRFCQNVSEALTD
                     IGTKLVFFRLEINKLDDADLAAKQKDPALAKYGPWLRDLRVFRPHQLSDELEKALHEK
                     HVVGRAAWSRLFDETIARLRYPFRNEQLSEPQILDKLSDKDASVRKDAAKSFGKVQGD
                     NIGVFSLVTNTLAKDKEIEDRWRKYPRPQSAMNLANVVEDKVVDALVSSVKAAYPRLA
                     HRYYKLKAKWFGVDKMPYWDRNAPLPEHDDRTIPWTEAEKIVLDAYRAFSPELADVGR
                     KFFGTGWIDAPARPGKSPGAFAHPTVPSAHPYLLLNYQGKVRDVMTLAHELGHGVHQV
                     LAARQGPLMADTPLTLAETASVFGEMLTFQSLLKSAPDKASRKAMLAGKVEDMLNTVV
                     RQIAFYDFESRLHMARRKSELTPDAIGEIWMAVQSESLGPALSFDEEYRFYWSYIGHF
                     IHSPFYVYAYAFGDCLVNSLYAAYQSGQKDFQTKYLDMLKAGGVKRHKELLAPFGLDA
                     SDPAFWDKGLGIISGFVDELETL"
     gene            complement(5922..6455)
                     /locus_tag="VF991_17110"
     CDS             complement(5922..6455)
                     /locus_tag="VF991_17110"
                     /inference="COORDINATES: protein motif:HMM:NF024911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9558218.1"
                     /translation="MKRFILTGTPGAGKTAILRQLEREGFGVVEEAATDVIALEQAGG
                     VAEPWTDPSFIDLVVDLQRSRQLRAATALDDIQFHDRSAVCTAALASFLGYPVSTRLS
                     RELQRIERQAIYQRRVFFIRSLGFTKPTEARRISFEDAERFEQIHEKTYRDHGFEIVP
                     IGPGSVLDRAAAIRRAL"
     gene            complement(6452..6943)
                     /locus_tag="VF991_17115"
     CDS             complement(6452..6943)
                     /locus_tag="VF991_17115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX9558219.1"
                     /translation="MTTPFDSCVTALRQPGPPEALFKAVDKALAETVGHKLFTLLYVA
                     PDGKRVKRLYTNMPKEYPVGGYKPVTESDWHKLVIGQRRAWVGFTYEDVKWAFFDHEL
                     IRSLGCESAINVPVVYAGRVLGTMNLLDAAGHYKESDPAKIEPLAALMIGPFLDAIAA
                     DPG"
     gene            complement(7424..>7702)
                     /locus_tag="VF991_17120"
     CDS             complement(7424..>7702)
                     /locus_tag="VF991_17120"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEX9558220.1"
                     /translation="DVWMNTADAARRGISNGETVRVFNDRGATLLPVKVTSRIAPGVV
                     SIKEGAWVTPGSDGRDTNGCANVLAEDRSAPCGATTYNTNLVEVERAI"
BASE COUNT         1291 a         2562 c         2548 g         1301 t
ORIGIN      
        1 gagcgccacg gcgccggcga gaaggagcgc gagcaggatc agccgcacgc cacgcgcctt
       61 gatcgtatcc ggcggcgtct gtacatcgac gacatgccgc gtctgtccac cgccgaagcc
      121 acggtcgaaa ccctcctcca ccatggcctc gacacggtct atgccctgcc cggcctgcac
      181 aacgacccgc tgttcgacgc cttctaccat gcggccggtc ggctgcgtgt gatccatccg
      241 cgccacgagc agaccgcggc ctacatggcg ctgggcgcgg cgctggcgac cggcaagccg
      301 caggctttcg ccgtcgtgcc cggtcccggc ctgctgaatg ccggcgcggc gctcttgacc
      361 gcctatggca tgaacgcgcc ggtgatcggc ctgatcggcc agatcccgca gaccgacatc
      421 gacaagggcc acggccacct gcacgagatc cacgaccagc tcggcctgat gcgccacatc
      481 accaaatggg ccgagcgcat caaaagcccg caggaggcgc caacgctggt ctcgcaggca
      541 atctggcacg cgacctcggg ccggccgcgg ccggtcgcct tggaatgtgc gctcgacacc
      601 tgggccaagc gtgccgaagt ggcgcttgcc gcggcgccgc tgccgctgcc gccggaaacc
      661 atcgacgacg aagcgatcac cgcggcggcg aaagtcctgg gcgccgccga acggccgatc
      721 atcgtggtcg gcggcggcgc gctcgacgcc ggtgccgacg tcatcaagct cgccgagatg
      781 ctggaagcgc cggtgagctc ctaccgtcgc ggccgcggcg tcgtgccgag ctcgcaccgt
      841 ctcgccgtcg acatgccggt cggccaccgc ctgtggaagg aggccgacgc cgtgctggcg
      901 atcggcacgc gcttcttcat ccagaacggc agctggggca tcgattccaa cctgaaggtg
      961 gtgcggctcg acatcgatcc cgacgagcat gaccgcctgc gcaagcccga cgtggcgctg
     1021 gtcggcgatg cggcgccgca actgcgtgcg ctgaccgccg ccttgcccaa gcataaccgc
     1081 ccgcgccatt cgcgcgccca ggagctgagg ggccatcgcg cctggcttgc cgagcgcctg
     1141 tcgcggctgg agccgcaggt gggcttcctg aaggcgatcc gcgcggcgct gcccgaggac
     1201 ggcatcttcg tcgacgaggt ctcgcagatc ggcttcgcct cgcgggtggc gctgcccatc
     1261 gaaaagccgc gcacgttcct gtcgcccggc taccaggaca atctcggctg gggttttggc
     1321 gccgcgctcg gcgccaaggc ggcgatgccg gacaagaagg tgctggcgat cgcgggcgac
     1381 ggcggcttca tgtatcaggt cggcgagctt gccaccgcag cgcgccacga cctcgccgtc
     1441 gtcgtggtgg tgttcgacaa cggcgccttc ggcaatgtga agcgcatcca gcaggagcgc
     1501 tacggcaacc gcctgatcgc ctcggacctg caaaacccgg atttctgcaa gctcgccgac
     1561 tccttcggca tcgcctcgtt caaggcgctc gacgccaagc agctcgaggc cgcgctgcag
     1621 aaggctttcg cgctgaacgc gcccgcgctg gtgtgggtgc cgcacggcga catgccgagc
     1681 ccgtgggaca tgatcatgat gcccaaggtg cgggggtgac ttgccgtcgt ctcgatcgga
     1741 gccgagcccc tcggaaaccc tcggggtaaa ctccgcgagg cggagcggag agacctcgtc
     1801 ggcgtcaggc aaggcccctc ggcttcgcta cgctccgctc ggggcgacgg accagaggct
     1861 gtccagcact tccctaaaac ccgtcttgca cacgaaaccc agtttccgct tcgccttgcc
     1921 ggcgtcgtag acgcggtcga tggagtcgaa catcgtccag ccacgcttgg cgtatttctc
     1981 ccggtagtcc gggaagtagc gcgccaccac cgacggcgcg tcggccagga gctcgcggca
     2041 gtcggccggc gagaacggcg tcatcgccga gatgatgaaa gtgtcgaagc ccagcgcctt
     2101 ggccctgtcc agcgctacaa cgtgagcctc ggcggtgtcc tcgaccgtca ggcggcgaaa
     2161 caggaactcg ttggccttgg tgttctcgcc ggactggacg atggcgtgcg ccatgtcgtc
     2221 ttcttcgggg aaaaagcgtg cggtgcgcag gatcaggatg ggcagccggt gcagatgatg
     2281 gaacagccgg cacagctcct cggcagcgcg tttggtgacg ccgtagatgt tgcgcggctc
     2341 gagcggcgag agggtctcgt cgatccacat cgcctccttc gccccgcccg cccttccgtc
     2401 acggatcttc tgcgagatca tcagcgaggt ggtcgaggtg aagacgaagc gatcgacctt
     2461 cgagccctcc gccaccgcct cctccaggag gttgagcgtg ccctgcacgt tcaccgccac
     2521 gaactccgaa ttgtcgtggg tctctatgtg cggcttgtga cgcgcggcgg cgtgcacgat
     2581 ggcctcgatt ccgtgcgcgc ggatgatgcg gcgcaccaag gcgcggtcga ccaccgagcc
     2641 cacgatctcc gtcgtcgccc ccgcttcagg gtcgagtccc accactccgt ggccatctcg
     2701 gcgcaggcgc ggcaccaggg tctggcccag ccagcccgac gaacccgtca ccaggatatt
     2761 caagacaagc ccgcttcctt caaggcggcg tcttggcgcg ccgccagggc ctcgacgtcg
     2821 aagccctcga tcaggctctc gaacagctgg tgccagttga tcgaggcacg caaatggatg
     2881 aacacggcgc cgagcccgat ggcggcgcgg tccatgaaca cgaactcgcg cggcgggcgc
     2941 acgccgccca tgcggcgcag ctcgccgaac acgttctgcg ccatttcgcg gccgtggcct
     3001 tcgaccatgc cctcggtcag gcggcgcggc cggtcgtcca tcaacggccc gtagagaaag
     3061 gcggcccagc ggttcagcac ggcgatcatg tcgtgcgtca ggccgctaaa accccagtcc
     3121 tcgtaggccg ccacggcgcg ggcgaggtcg tcggtcatga gcgcgcgata aagctcgatc
     3181 gagccgcgca cgaaccgcgg cgggaagatt cgcacgcagc cgaaatccat caggttcacc
     3241 gaaccgtcgg gccgcacagt gtagttgccg agatgcgggt caccatggat cacgccgtag
     3301 gaatagaacg gcacgtacca ggtgcgaaac atctggatgg cgagccggtc cttgtcctcc
     3361 tgcgaatggc tcttccagtt gagcagtggc tcgcccgaca gccaggtcat ggtgagcagc
     3421 cggtcggtcg agtgcgaggg cacgacctcg ggcacgtgca cattggcctc gtcacgcagg
     3481 atgtggcggt agagcgcgac gtgcttggct tcgcgcctat aatccagctc ctcgcgcagg
     3541 cgcatggtga tctcggcgtg gatctcgtcg gtgcggatgg ccggatcgaa gcgctggccg
     3601 accgcgaaca ccagtttcag ctggttgaga tcggcttgga gcgccgacgc catgtcggga
     3661 tactgcagtt tgaccgcgac ctcggtgcca tcctgcagga tcgcgtgatg gacctggccc
     3721 agcgaagcgg cgaacgaggc ttccttgtcg aacttggtga acttcgatgg ccagtcggaa
     3781 cccaactcgg tcgccatgcg ccggcgcacg aaggcccaac ccatcgccgg cgcgttggcc
     3841 tgcaactgcg tcagctcacg ggcatattcc ggcggcagcg cgtcggggat ggtggcgatc
     3901 agttgcgccg ccttcatcag cgggcccttc aggccgccga gcgcggcttt cagctcggac
     3961 gcgtgcttgt cgcggtcaag ggtccagccg agatagcgct ggcccaccag cttggccgcc
     4021 agcccgccga ccgaagcgcc gaccttggca tagcggccaa gccggccacc gagggagtcg
     4081 ctctcgtcgt cgtcggccat gcctacagcg tttccagctc gtcaacgaag cccgaaatga
     4141 tgccaagccc cttgtcccag aaggcgggat cggaggcatc gagaccgaac ggcgccaaaa
     4201 gctccttgtg gcgcttcacg ccgcccgctt tcagcatgtc gagatacttg gtctggaaat
     4261 ccttctggcc ggactggtag gcggcataga gcgagttcac caggcagtcg ccgaaggcat
     4321 aggcgtagac gtagaacggc gaatggatga agtggccgat atacgaccag tagaagcggt
     4381 actcctcgtc gaagctgagg gccggcccca ggctctcgct ctgcaccgcc atccagatct
     4441 cgccgatcgc atcgggcgtc agctcgctct tgcgccgcgc catgtgcagg cgcgattcga
     4501 aatcgtagaa ggcgatctgg cgaaccacgg tgttcagcat atcctcgacc ttgccggcga
     4561 gcatggcctt gcgcgatgcc ttgtcgggcg ccgacttgag cagcgactgg aaggtcagca
     4621 tctcgccgaa caccgaggcc gtctcggcaa gcgtcagcgg cgtgtcggcc atcagcggac
     4681 cctggcgtgc cgccagcacc tggtgcacgc cgtggccgag ttcgtgggcg agtgtcatga
     4741 catcccgcac cttgccctga tagttcagca gcagataagg atgcgccgac ggcaccgtgg
     4801 gatgggcgaa ggcgcccggc gacttgccgg gccgtgccgg cgcatcgatc cagcccgtgc
     4861 cgaagaactt tcggccgaca tcggccagct cgggcgagaa ggcgcggtag gcgtcgagca
     4921 cgatcttctc cgcctcggtc cacgggatgg tccggtcgtc gtgctcgggc agcggcgcgt
     4981 tcctgtccca gtacggcatc ttgtcgacgc cgaaccactt ggccttgagc ttgtagtagc
     5041 ggtgcgccag ccgcggatag gccgccttca ccgaggagac gagcgcgtcc accaccttgt
     5101 cctcgaccac gttggcgagg ttcattgccg actgcggacg cgggtacttg cgccagcgat
     5161 cctcgatctc cttgtcctta gccagcgtgt tggtgaccag cgagaagacg ccgatattgt
     5221 cgccctgcac cttgccgaac gacttggcgg catccttgcg cacgctggcg tccttgtcgg
     5281 agagcttgtc gaggatctgc ggctcgctca gctgctcgtt gcggaaggga tagcgcagcc
     5341 gcgcgatggt ctcgtcgaac aggcgcgacc aggcggcgcg gccgacgacg tgtttctcgt
     5401 gcaacgcctt ctccagctca tcggagagct ggtgcggacg gaagacccgg agatcgcgca
     5461 gccacgggcc gtatttggcc agggcggggt ctttctgctt ggccgccagg tcggcatcgt
     5521 cgagcttgtt gatctccagg cgaaagaaca ccagcttggt gccgatatcg gtcagcgcct
     5581 cggagacgtt ctggcaaaag cggccgcgct cgggatcggc ctgatcctgg gcatagtaaa
     5641 gcgaggcata ggagccgatg cggcccatca ggtcgctcaa cgcctcgaat ctggcgacgg
     5701 ccgcgcccag cgccttgcca tcgaggctcg ccaccttgcc ctcataggcc ttggcgaacg
     5761 actctgagtc ggcggcggcg cgcttgaggt cggcgtcgag atcggacccg gtcgggctgg
     5821 aatagaggtc tgaaaggttc caggtcggca gctcgcccaa cacggcatcc atgcacaaac
     5881 tccttgctgg ccctggatat ggggcgccgc ccgccacgcg gctagagcgc gcgccggatc
     5941 gccgccgccc ggtctagcac gcttcccggt ccgataggca cgatctcgaa gccatgatcg
     6001 cgataggtct tttcatggat ctgctcgaag cgctcggcgt cctcgaagct gatcctgcgc
     6061 gcctcggtgg gcttggtgaa gcccaggctg cgaataaaaa atacgcgcct ttggtagatc
     6121 gcttgccgct cgatgcgctg cagctcgcgc gacagtcggg tggagacggg atagcccaga
     6181 aagctcgcga gcgccgccgt gcagaccgcc gagcggtcat ggaactggat gtcgtccagc
     6241 gccgtcgcgg cgcgaagctg ccggcttcgt tgcaggtcga cgaccaggtc gatgaacgag
     6301 ggatcggtcc acggctcggc gacgccgcct gcctgctcga gcgcgatgac atcggtcgcc
     6361 gcctcctcga cgacgccaaa cccttcccgt tccagctggc gcaggatcgc cgtctttccc
     6421 gcgcctggcg tgccggtgag gatgaaccgc ttcatcccgg atcggcggcg atggcgtcga
     6481 ggaacgggcc gatcatgaga gcggcaagag gctcgatctt tgccgggtcg ctttccttgt
     6541 agtggcccgc ggcatcgagc aggttcatgg tgccgagcac gcggccggca taaaccaccg
     6601 gcacgttgat ggccgattcg cagcccagcg agcggatcag ctcgtgatcg aagaacgccc
     6661 atttgacgtc ctcgtaggtg aagccgaccc aggcgcgacg ctggccgatc acaagcttgt
     6721 gccagtcgct ctcggtcacc ggcttgtagc cgccgacggg atattccttg ggcatgttgg
     6781 tgtagagtcg cttcacccgt ttgccgtcgg gcgccacata gagaagcgtg aacagcttgt
     6841 ggccgaccgt ttcggccagc gccttgtcga ccgccttgaa cagcgcctcg ggcggtccgg
     6901 gttggcgaag cgccgtgacg caggagtcga agggcgttgt cattgatatc ctcatgtagc
     6961 cgtcattgga gcgtaacccg attgagaaga ctcaagcggc atctcattcg ccttccccgt
     7021 cataccaggg cagggctatc gcatatggtg gttccgtcgt ctcgaccgga gcgcgaagcg
     7081 cggagcggag aggccttctc tccacgataa gccgcttatc gtggagagaa ggtctctccg
     7141 ctcgggccgg agtttacccc gagcgaagtc gagggggccc tcggtcgaga cgacggggag
     7201 tcgccatatg cgatagccct gcccgtcata cgggggaggt ggcccgcagg gccggagggg
     7261 aaagctcccg tcgagacgcc tgcagatttc agatcatggt cttcaaaatt atctgtgggg
     7321 ccttccccct ccgccccgta tgacggggca cctcccccgt aagacgaggg aggcgtgact
     7381 ttaatgaccg catccggcat tgcggaatcc gctccgccga acctcaaatc gcccgctcga
     7441 cctcgaccag attcgtattg taggtcgtgg cgccacacgg cgccgagcgg tcctcggcca
     7501 gcacgttggc gcagccgttg gtgtcgcggc catcactgcc cggcgtcacc caggcacctt
     7561 ccttgatcga gacgacgccc ggcgcgatgc ggctggtcac cttcacgggc agcaaggtcg
     7621 cgccgcggtc gttgaagacg cggaccgtct cgccgttcga gatgccgcgt cgggcggcgt
     7681 cggcggtgtt catccagacg tc
//
LOCUS       DASWGA010000732         4946 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_211782, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000732 DASWGA010000000
VERSION     DASWGA010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4946
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211782"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VF991_17125"
     CDS             <1..474
                     /locus_tag="VF991_17125"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEX9558221.1"
                     /translation="LKKIGPFQISAACYPEKHPDSADAKADLENLKRKVDAGADRCIT
                     QFFFDADDFLRFRDSAATAGVNAPIVPGIMPVSNFQGITKMAGLCGAKVPAWLASLFD
                     GLEEDVETRRMIAATVAGDLCRRLRDEGVDQFHFYTLNRADLTFAICHLLGVRPQ"
     gene            471..1526
                     /locus_tag="VF991_17130"
     CDS             471..1526
                     /locus_tag="VF991_17130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013417717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEX9558222.1"
                     /translation="MTRAEKAQHLRDIGAERILVKDGPYGSMIQSYRLDEEGFRGGRT
                     FSHDQKGNNDLLNLTRPAVVGEICNAYLDAGADIVATNTFNSNAISLSDYGIAVMARE
                     INIAAAKLVRACADAATARDPAKPRFVVGALGPTNKTLSVSPNVNDPGYRAVSFDEMK
                     GIYREQIDGLLDGGVDFILIETVFDTLNAKAALVAADEAAEARGEELPVMVSMTLTDL
                     AGRNLSGQTVEAFWHSVRHAKPLTMGLNCSFGATELHPYVNALNPQVNGLVCVYPNAG
                     LPNELGAYDEPPEMTAKLVKGWAENGWLNVVGGCCGTTPAHIKAIAEAVKDVKPRQWH
                     VLPPALRLSGMEAASFF"
     gene            1526..4168
                     /gene="metH"
                     /locus_tag="VF991_17135"
     CDS             1526..4168
                     /gene="metH"
                     /locus_tag="VF991_17135"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: protein motif:HMM:NF007024.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEX9558223.1"
                     /translation="MPADEANNVQRATFINIGERTNVTGSARFKKLILEGDYTAAVEV
                     ARQQVESGAQIIDVNMDEGLLDSELAMDTFLKLIAAEPDIARVPIMIDSSKWSVIEAG
                     LKCVAGKPIVNSISMKEGVEPFIAHARKVRRYGAAVVVMAFDEKGQADTRQRKVEICA
                     RAYDILVNQVGFPAEDIIFDPNIFAVATGIEEHNNYGVDFIEATREIKARCPGVKISG
                     GVSNLSFAFRGNEPVRKAMHSVFLYHAIQAGMDMGIVNAGQLEVYDQIPAELREVCED
                     VILNRNPEATERLLELAPKYKGTGEVAETQDAEWRSWPVEKRLEHALVKGIDQFVVAD
                     TEEARQQIARPIEVIEGPLMAGMNVVGDLFGSGKMFLPQVVKSARVMKKAVAHLLPYI
                     EAEKTATSRPKGKIVMATVKGDVHDIGKNIVGVVLQCNNFEVIDLGVMVPFQDILKSA
                     NDNKADLIGLSGLITPSLDEMVTVAEEMTRQGFNLPLLIGGATTSKVHTALRIAPRYK
                     GTTVHVLDASRAVGVCTALVSESGAQAADFAAKVATEYEAIRVERAGNTKEKVVPLQV
                     ARANDFKIDWSSYTPPKPAVTGTRVFAEYPLHELVERIDWTPFFRAWELAGNFPAILE
                     DKVVGDSARKLYADARKMLDHIVREKWLTAKGVVSFWPCRREGDDVVLFADDTRAKEV
                     SRLFFLRQQIEKRAPRANMCLADFVSPEADWIGGFAVTAGHGIEEHLARFKADHDDYS
                     DILLKALADRLAEAFAERLHERVRKTLWGYASDEALTNEELTREKYRGIRPAPGYPAC
                     PDHSQKPELFRLLNAGQNAGISLTESFAMLPTAAVSGYYFAHPDAQYFGVARIGRDQL
                     EDYAKRRGVSIDQAEKWLRPNLGY"
     gene            4266..>4946
                     /locus_tag="VF991_17140"
     CDS             4266..>4946
                     /locus_tag="VF991_17140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9558224.1"
                     /translation="MTYALVLVVGYIAGTVSGIVGTGATIILLPILVFAFGPREAVPI
                     MAVVALMSNFAKITSWWKEIDWRACGSYALGGIPAAALGARTLLILPERLIDIALGLF
                     FLLMVPGRRWLATRNLKFGFWHLAIAGAVIGFLTGIVVSTGPLSVPAFAAYGLVKGAF
                     IATEAAGSLALYISKALTFRQFGALPIDIVLKGLISGSSVMAGTYTARLIVERLGVAT
                     FQCLLDVVM"
BASE COUNT          874 a         1698 c         1595 g          779 t
ORIGIN      
        1 ctgaagaaga tcggcccgtt ccagatcagc gccgcctgct atcccgagaa gcaccccgat
       61 tcggcggacg ccaaagccga cctggagaat ctcaagcgca aggtcgatgc cggcgccgac
      121 cgctgcatca cccagttctt cttcgacgcc gacgatttcc tgcgcttccg cgatagcgcc
      181 gcgacggcag gggtgaacgc gccgatcgtg ccgggcatca tgccggtctc gaacttccag
      241 ggaataacca agatggccgg cctgtgcggc gccaaggtgc cggcatggct cgccagcctg
      301 ttcgacggcc tcgaggagga cgtcgagacg cggcgcatga tcgccgccac cgtggcgggc
      361 gatctttgcc gacgcctgcg cgatgaaggc gtcgaccagt tccatttcta tacgctgaac
      421 cgggccgatc ttaccttcgc gatctgccat ttgctgggag tgcgccccca atgacccgcg
      481 ccgaaaaagc ccagcacctg cgcgacatcg gcgccgagcg catcctggtg aaggacgggc
      541 cctacggctc gatgatccag agctatcgcc tcgacgagga aggctttcgc ggcgggcgca
      601 cgttcagcca cgaccagaag ggcaacaacg accttctgaa cctgacgcgg cccgcggtgg
      661 tgggcgagat ctgcaacgcc tatctcgatg ccggcgccga catcgtcgcc accaacacct
      721 tcaactccaa cgccatcagc ctttccgact acggcatcgc cgtcatggcg cgcgagatca
      781 acatcgccgc agccaagctc gtgcgcgctt gcgccgatgc cgccacggca cgcgatcccg
      841 ccaagccgcg cttcgtcgtg ggcgcgctcg gccccaccaa caagaccttg tcggtgtcgc
      901 ccaacgtcaa cgatccgggc taccgcgccg tcagcttcga cgagatgaag ggcatctatc
      961 gcgagcagat cgacgggctg ttggatggcg gcgtcgattt catcctgatc gagacggtgt
     1021 tcgacacgct gaacgccaag gccgccctgg tggccgccga cgaggcggcc gaggcgcgcg
     1081 gcgaggaatt gccggtgatg gtgtccatga ccctgaccga cctcgccggc cgcaacctct
     1141 cgggccagac ggtcgaggcg ttctggcatt cggtgcgcca cgccaagccg ctcaccatgg
     1201 ggttgaactg cagcttcggc gccaccgagc tgcatcccta cgtgaacgcg ctcaacccgc
     1261 aggtcaacgg cctggtctgc gtctatccca acgccggcct gcccaacgaa ctcggcgcct
     1321 atgacgagcc gcccgagatg accgccaagc tggtcaaggg ctgggccgag aacggctggt
     1381 tgaacgtggt cggcggctgc tgcggcacga cgccggcgca catcaaggcg atcgccgagg
     1441 cggtgaagga cgtgaagccg cggcaatggc acgtcctgcc gccggcgctg agactctcgg
     1501 gcatggaagc ggcgagtttc ttctgatgcc tgcagacgaa gccaacaacg tccagcgcgc
     1561 aaccttcatc aatatcggcg agcgcaccaa cgtcacgggc tcggctaggt tcaagaaact
     1621 gatcctcgag ggcgactaca cggccgcggt cgaggtcgcg cgccagcagg tcgagagcgg
     1681 cgcgcagatc atcgacgtca acatggacga gggcctgctc gattccgagc tggcgatgga
     1741 cacgttcctg aagctgatcg ccgcggagcc tgacattgcc cgggtgccga tcatgatcga
     1801 cagctccaag tggagcgtga tcgaggccgg cctgaaatgc gtcgccggca agccgatcgt
     1861 gaactcgatc tccatgaagg agggcgtcga gccgttcatc gcccatgccc gcaaggtccg
     1921 ccgctacggc gccgccgtcg tcgtcatggc gttcgacgag aagggccagg ccgacaccag
     1981 gcagcgcaag gtcgagatct gcgcccgcgc ctacgacatc ctggtgaacc aggtgggctt
     2041 tccggccgag gacatcatct tcgatcccaa catcttcgcc gtcgccaccg gcatcgagga
     2101 gcacaacaac tacggcgtcg atttcatcga ggccacgcgc gagatcaaag cgcgctgccc
     2161 cggcgtgaaa atctcgggcg gcgtgtcgaa cctctccttc gccttccgcg gcaacgagcc
     2221 ggtgcgcaag gccatgcact cggtgttcct ctatcacgcc atccaggccg gcatggacat
     2281 gggcatcgtc aatgcgggcc agctcgaggt ctacgaccag atccccgccg agctgcgcga
     2341 ggtttgcgag gacgtgatcc tgaaccgcaa tcccgaggcc accgagcggc tgctcgaact
     2401 ggcgcccaag tacaagggca ccggcgaggt cgccgagacg caggatgccg aatggcggag
     2461 ctggccggtc gagaagcggc tggagcatgc gctggtcaag ggcatcgacc agttcgtggt
     2521 cgccgacacc gaggaggcgc gccagcagat cgcgcggccg atcgaggtca tcgagggccc
     2581 attgatggcc ggcatgaacg tggtcggcga cctgttcggc tcgggcaaga tgttcctgcc
     2641 gcaggtcgtc aagagcgcgc gcgtcatgaa aaaggcggtc gcccacctgc tgccctacat
     2701 cgaggccgag aagaccgcga cctcgcggcc caagggcaag atcgtcatgg cgacggtcaa
     2761 gggcgacgtc cacgacatcg gcaagaacat cgtgggcgtg gtgctccagt gcaacaactt
     2821 cgaggtcatc gacttgggcg tcatggtgcc gttccaggac atcctgaaat cggccaacga
     2881 caacaaggcc gacctgatcg gcctgtcggg cctgatcacg ccctcgctcg acgagatggt
     2941 gaccgtggcc gaggagatga cgcgccaggg attcaacctg ccgctgctga tcggcggcgc
     3001 cacgacgtcc aaggtccaca ccgcgctcag gatcgcgccg cgctacaagg gcacgaccgt
     3061 gcacgtgctc gacgcctcgc gcgcggtcgg ggtgtgcacg gcgctggtct ccgaatcggg
     3121 tgcgcaggcc gccgacttcg ccgccaaggt cgccaccgaa tacgaggcga tccgcgtcga
     3181 acgcgcggga aacaccaagg agaaggtcgt tccgctccaa gtcgcgcgcg ccaacgactt
     3241 caagatcgac tggtcgtcct acacgccgcc caagcccgcc gtcaccggca cgcgcgtctt
     3301 cgccgagtat ccgctgcacg agctggtcga gcgcatcgac tggacgccgt tcttccgcgc
     3361 ctgggagctc gccggcaact ttccggccat cctcgaggac aaggtggtgg gcgacagcgc
     3421 ccgcaagctc tacgccgacg cgcgcaaaat gctggaccac atcgtgcgcg agaagtggct
     3481 gaccgccaag ggcgtggtga gcttctggcc gtgccgccgc gagggcgacg acgtggtgct
     3541 gttcgccgac gacacgcgcg ccaaggaagt gtcgcggctg ttcttcctgc gccagcagat
     3601 cgagaagcgc gcgccgcgcg ccaacatgtg cctggccgac ttcgtctcgc ccgaggccga
     3661 ctggatcggc ggcttcgccg tcacggccgg ccacggcatc gaggagcacc tcgcccgctt
     3721 caaggccgac cacgacgatt attccgacat cctgctgaag gcgctggccg accggctggc
     3781 cgaggctttt gccgagcgcc tgcacgagcg ggtgcgcaag accctgtggg gctacgcctc
     3841 cgacgaggcg ctcaccaacg aggagctgac gcgcgaaaag tatcgcggca tccgaccggc
     3901 gccgggctat cccgcctgcc ccgaccacag ccagaagccc gagctgttcc ggctgctgaa
     3961 cgccggccag aacgccggca tcagcctgac cgagagcttc gccatgctgc cgacggcggc
     4021 ggtctcgggc tactacttcg cccatcccga cgcgcagtac ttcggcgtgg cgcgcatcgg
     4081 ccgcgaccag ctcgaggatt acgccaagcg gcgcggcgtt tcgatcgacc aggcggagaa
     4141 atggctgcgg ccgaacctcg ggtattagcg gaacgctcat cgctgggggc gcgccactcc
     4201 agtggcgcga tcataactcg tgagaaaacg cgccactgga gtggcgcgcg cccagcaagg
     4261 ccgtgctgac ctacgcgctg gtgctcgtcg tcggctatat cgccggcacg gtgagcggca
     4321 tcgtcggcac cggcgccacc atcatcctgc tgcccatcct ggtgttcgcc ttcggcccgc
     4381 gcgaggcggt gccgatcatg gcggtcgtcg ccctgatgtc gaactttgcc aagatcacct
     4441 cgtggtggaa ggagatcgac tggcgcgcgt gtggctccta tgcgctgggc ggcattccgg
     4501 ccgcggcgct cggcgcgcgc accctgctga tcctgccgga acggctgatc gacatcgcgc
     4561 ttggcctgtt ctttctcctc atggtccccg gccgccgctg gctcgcgacg aggaacctca
     4621 agttcggctt ctggcatctc gccatcgccg gcgcggtgat cggcttcctg accggcatcg
     4681 tcgtgtcgac cggcccgctc agcgttcccg ccttcgccgc ctacggcctg gtcaaaggcg
     4741 ccttcatcgc caccgaagcc gcgggctcgc tggcgctcta catcagcaag gcgctgacct
     4801 tccgccagtt cggcgccttg ccaatcgaca tcgtgctgaa gggcctgatc tccggctcgt
     4861 cggtgatggc cggcacctac accgcacgcc tgatcgtcga gcggctgggc gtcgccacct
     4921 tccagtgcct gctcgacgtc gtgatg
//
LOCUS       DASWGA010000733         1866 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_845832, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000733 DASWGA010000000
VERSION     DASWGA010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1866
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_845832"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..771)
                     /gene="hisA"
                     /locus_tag="VF991_17145"
     CDS             complement(22..771)
                     /gene="hisA"
                     /locus_tag="VF991_17145"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEX9558225.1"
                     /translation="MLIIPAIDLKDGRCVRLKQGDMSTATVFSDDPVAMARHWAAEGA
                     RRLHIVDLNGAIAGRPKNEKVIRDMIAALGGVLPIQLGGGIRDLDAIESYLDAGVTYV
                     VIGTAAVKNPGFLSDACYAFPGHVIAGLDAKDGKVAVEGWSKMTGHDVVDLAKKFEEY
                     GVEALIYTDIGRDGMMTGINIDATLKLAQAIKTPIIASGGLNSLKDVQAVCSQLVPEG
                     IIGAIAGRALYEGKLDLKKAQATADKALGKD"
     gene            complement(790..1401)
                     /gene="hisH"
                     /locus_tag="VF991_17150"
     CDS             complement(790..1401)
                     /gene="hisH"
                     /locus_tag="VF991_17150"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018409004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEX9558226.1"
                     /translation="MRIAVVDYGMGNLRSVSKALEHVAPGAEVLATADPAAIRSAQRV
                     VVPGQGAMPDCMRQLAASGAREAVIEAAGAKPFLGICIGLQMLFERGEEGDTRGLGLL
                     PGNVPRFRVSGLKIPHMGWNEVLQRRPHALWAGIPDRSRFYFVHSYFPAPRDEGVTAA
                     TCVYGMPFTCAVARDNIFAVQFHPEKSQSAGLQLLSNFVRWRP"
     gene            complement(1402..>1866)
                     /gene="hisB"
                     /locus_tag="VF991_17155"
     CDS             complement(1402..>1866)
                     /gene="hisB"
                     /locus_tag="VF991_17155"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEX9558227.1"
                     /translation="QVARHAMLDLDIEAKGDLHIDAHHTVEDIGITLGQAFAKAIGDK
                     AGVRRFGHAYVPLDEALSRVVIDFSGRPGLEYHVKFTRALIGEFDVDLVHQFFQGFAN
                     HAQVTLHIDNLRGDNAHHQCETMFKAFARALRMAAEPDPRAAGTVPSTKGSL"
BASE COUNT          302 a          621 c          617 g          326 t
ORIGIN      
        1 cgcgcttggc gagccccatg gctagtcctt gccgagcgcc ttgtcggcgg tcgcctgggc
       61 cttcttcaag tcgagcttgc cctcgtagag cgcgcggccg gcgatcgcgc cgatgatgcc
      121 ttcgggaacc agctggctgc agaccgcctg cacgtccttg aggctgttga gcccgcccga
      181 ggcgatgatc ggcgtcttga tggcctgcgc cagcttgagc gtcgcgtcga tgttgatgcc
      241 ggtcatcatg ccgtcgcggc cgatgtcggt atagatcagc gcctcgacac cgtactcctc
      301 gaatttcttc gccaggtcga cgacgtcgtg gccggtcatc ttcgaccagc cctcgaccgc
      361 caccttgccg tccttggcgt ccaggccggc gatgacatgg ccgggaaagg catagcaggc
      421 gtcggacagg aatcccgggt tcttcacggc ggccgtgccg atcaccacgt aggtgacgcc
      481 cgcgtcgagg tagctctcga tggcgtccag gtcgcggatg ccgccgccga gctggatcgg
      541 cagcaccccg ccgagcgccg cgatcatgtc gcggatcact ttctcgttct tcggccggcc
      601 ggcgatggcg ccgttcaggt cgacgatgtg gaggcgccgg gcgccttcgg ccgcccaatg
      661 cctcgccatc gcgaccgggt cgtcggaaaa cacggtagcc gtgctcatgt cgccttgctt
      721 caggcgcacg cagcgcccgt ccttcaggtc aatagccggg atgatgagca ctcagtgctc
      781 gattgaaaat cagggacgcc agcgcacgaa gttggagaga agttgcaggc ccgcagactg
      841 gcttttttcc ggatggaact gtacggcaaa aatgttatcc cgggcaaccg cgcaggtaaa
      901 gggcatgccg tagacgcacg tggcggccgt caccccctcg tcgcgcggcg ccgggaagta
      961 gctgtgcacg aagtaaaacc ggctgcggtc gggaattcct gcccacagcg cgtgaggccg
     1021 ccgctgcagc acctcgttcc agcccatatg cggaattttg agacccgaga ccctgaagcg
     1081 cggcacgttg ccggggagca agccgagacc ccgggtgtcg ccttcctcgc cgcgctcgaa
     1141 cagcatctgc aggccgatgc agatgccgag gaagggcttg gcgccggccg cctcgatgac
     1201 tgcctcgcgc gccccgctcg cggccagctg gcgcatgcag tcgggcattg ccccctgacc
     1261 gggcaccacg acccgctgcg cggaccggat cgccgcagga tcggcggtcg ctagcacttc
     1321 ggcgccgggg gcgacatgct ccagcgcctt cgacaccgag cgcaggttcc ccatgccgta
     1381 atcgacgacg gcaatcctca attaaaggga accctttgtc gaaggcacgg ttccggctgc
     1441 gcgcgggtcc ggctcggccg ccatgcgtaa cgcgcgcgca aacgccttga acatggtttc
     1501 gcactggtga tgcgcgttgt cgccgcgcag gttgtcgatg tgcagcgtga cctgagcgtg
     1561 gttggcgaag ccctggaaga actggtgcac caggtcgacg tcgaactcgc cgatcagcgc
     1621 acgggtgaac ttgacgtggt actcgagccc cggccggccg gaaaaatcga tcaccacgcg
     1681 cgacagtgcc tcgtcgagag gcacgtatgc gtggccgaag cggcgtacgc cggccttgtc
     1741 gccgatcgcc ttggcgaacg cctgccccag cgtgatgccg atgtcctcga ccgtgtgatg
     1801 cgcgtcgatg tgcagatcgc ccttcgcctc gatgtcgagg tcgagcatgg cgtggcgcgc
     1861 cacctg
//
LOCUS       DASWGA010000734         5571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2363542, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000734 DASWGA010000000
VERSION     DASWGA010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5571
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2363542"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="VF991_17160"
     CDS             complement(<1..633)
                     /locus_tag="VF991_17160"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558228.1"
                     /translation="MVERTEPVVPARSNWPLLPVLRRMAAMPLRDPFAFTGLLIYVLF
                     VLVALFADHLAPLDPLEILFTKTGKLAANVAPSADFPLGTTNLGRDIYAQLVHGTRSA
                     LAVGLSAAVIVASVGTIVGLVAGYFGGTTDAVLMRIADMALSLPFLPFVIVLTGFLGA
                     STSNIVLAVALLLWPNSARVIRSQVLTLRERAYVEAARVTGASSWRILFVH"
     gene            complement(617..1594)
                     /locus_tag="VF991_17165"
     CDS             complement(617..1594)
                     /locus_tag="VF991_17165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007752025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558229.1"
                     /translation="MKLVLERFTHNALALLAVTTILFFMFRLMPGTPLAAFINENLNA
                     DQQQMMLEQFGLDKPMWQQYFIYLGNLLQGEFGLSFFQRRPVMTILLEVLPNSLILTL
                     ISLIIAYIFGVLAGAWLAWKRGSWIERVAVPAVLATRAAPEFWIGMVLLALLSFNAGW
                     FPSGGASSPGQAYANNWQRIASWDYVHHLALPVLTLALYLQGLPLLLMRSNMLEVMHE
                     EFVTMARMKGFSEWRIVIHHAARNALLPVATAFALGVGLSMGGNVVIETVFSWPGIGR
                     LLVQAVSVHDYPLAQGAFLMIALVLALMNFVADLLYMVLDPRVSHGRKN"
     gene            complement(1706..3367)
                     /locus_tag="VF991_17170"
     CDS             complement(1706..3367)
                     /locus_tag="VF991_17170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007752023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558230.1"
                     /translation="MRKLTIAAAAGLAALGLATTAFAQGPTEKVRKLNLYSWPQAALP
                     QSYQAAQLIAQQWRQLGLEVEVKPLQRQAQTQLIWFSRDKWDVTMWRMVGRPERSDPD
                     EFLYSLYHSSYIEKGYNLVGYLNPEYDKLAEKQRTQLDREERRKTAFAMQEIINRDQP
                     NAFLVHPKYPLAFNKAVFKEDSVVNQSGIGIRNIWTFLNIVPLGAQKDLIINSNETIN
                     ATNPLYIGGAVDSWVTDLIWDRVMRIGPDGMPRPWAAESVAWVDDKTIDVKLRAGMKW
                     HDGKPVTVEDVIFSFEAPAGDKAPMYKPFVTDIASMEKTGDLGLRFKLKQPNTTFLTA
                     SLAKVNLIPKHIWEPVLKDLAGKPETAEQLKEVSKIGSGPFKLVRWSPTEEIVLERNG
                     QHFAAPKIERWIMRIVPNAEATLGMLKRGELNFIGIFGGDPEVLVKFAKDNPDIAIKS
                     EVDIGFEYVAFNNRRPPFDDVAFRRALSLSIDRRLMVAAAWQDYAIPANSHVSPVLSF
                     WHDPAVDQLKTGLAEAKKILQDAGYRVVGGKLYYPVGKQEKLTTE"
     gene            complement(3364..4746)
                     /locus_tag="VF991_17175"
     CDS             complement(3364..4746)
                     /locus_tag="VF991_17175"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9558231.1"
                     /translation="MPPKSRQLKLGGFFSVPGNHLAGWRHPDAVPTADMDFREYAHIT
                     QVAEEAKFDTIFFQDTVGVAGSRALARGERTRAKLSRTVKLEPTATLAALAMVTSRIG
                     LVATATTTYNEPYNIARRFASIDHISGGRAGWNLVTSQIEDESENFGFDEHLAHAERY
                     ERAAEFYEVVTGLWDSWEDGGLLRDKKSGIYMDRDKVHFLDHVGKHFKVKGPLNITRS
                     PQGWPVVAQAGSSEAGRELAARTADVVFTAQTKIDEAKAFYADIKDRAARYGRTPDDI
                     KIMPGLTPVLGRTMAEARENYEYLQSLMPDDVALQSLAHISGGLDLTKFPLDGPLPEL
                     PPSNAAKARQALVVRTAREGNMTLRQIARHTAAGTGHRVLVGTPEYMADEMEAWLEEE
                     AADGFNVVCNYYPKPFEDFCRLVVPELQRRGIFRTEYEGTTLRENLGLRVPENRYTRH
                     ARQGLAKEAS"
     gene            complement(4950..>5571)
                     /locus_tag="VF991_17180"
     CDS             complement(4950..>5571)
                     /locus_tag="VF991_17180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="nitrilotriacetate monooxygenase"
                     /protein_id="HEX9558232.1"
                     /translation="FCNDMRSRVVNYGRGPEDIRIFPGIMPIVGRTETEAREKYEELR
                     SLVDDGVGIAGVARLAGGVDIFACDPDGPLPELKPSNAARARQDMIIAMGKRGMTIRE
                     IGRVLAMSQAHRVLYGTPSQLADDMQAWLEAGACDGFNLLFPYYPKPLEEWVTMVVPE
                     LQRRGIFRTEYEGKTFRENLGVPIPPNIHTANRTSVQVKRAVAADD"
BASE COUNT          936 a         1728 c         1926 g          981 t
ORIGIN      
        1 gtgcacgaac aggatgcgcc aggagctggc gccggtgacg cgcgccgcct cgacataggc
       61 gcgctcgcgc aaggtcagca cctggctccg gatgacgcgc gcggagttgg gccacaggag
      121 cagcgcgacg gcgagcacga tgttggaggt gctggcgcct aaaaagcccg tcagcacgat
      181 gacgaacggc aggaacggca ggctgagcgc catgtcggcg atgcgcatca ggacggcgtc
      241 ggtggtgccg ccgaaataac ccgccaccag gccgacgatg gtgccgactg acgcgacgat
      301 gacggcggcg gacaggccaa cggcgagcgc gctccgcgtc ccgtgcacga gctgggcgta
      361 gatgtctcgg ccgagattgg tggtgccgag gggaaagtcg gcggacggcg cgacgttggc
      421 cgcaagcttg cccgtcttgg tgaacaggat ctccagcgga tcgagcggcg ccagatggtc
      481 ggcgaacagc gccaccagca cgaagagcac gtagatgagc aggccggtga aggcgaacgg
      541 atccctgagc ggcatcgccg ccatgcgtcg cagcaccggc aggagcggcc agttgctgcg
      601 cgctggaacg accggttcag ttctttcgac catggctcac ccgcgggtcg aggaccatgt
      661 acaaaaggtc ggcgacgaag ttcatcagcg ccagcaccag cgcgatcatc aggaaagcgc
      721 cctgcgccag cggatagtcg tggacggaga cggcctggac cagcaggcga ccgatgccgg
      781 gccagctgaa caccgtctcg atcacgacat tgccgcccat cgacaagccg acgcccaggg
      841 cgaaggcggt ggccaccggc aggagcgcgt tgcgtgcggc gtggtggatg acgatgcgcc
      901 attcggagaa gcccttcatg cgcgccatgg tgacgaactc ctcgtgcatc acctccagca
      961 tgttggaccg catcagcagc aagggcaggc cctgcaggta gagagccagg gtcaggaccg
     1021 gcaaggcaag atggtggacg tagtcccatg aggcgatgcg ctgccagttg ttggcatagg
     1081 cctgcccggg gctgctggcg ccgcccgacg ggaaccagcc ggcgttgaac gacaggagcg
     1141 ccagcaggac catgccgatc cagaactcgg gagcggcgcg cgtcgccagc acggccggca
     1201 ccgcgacgcg ttcgatccag ctaccgcgct tccaggccag ccaggcgccg gccagcacgc
     1261 cgaagatgta ggcgatgatc aacgagatga gagtcaggat cagcgagttg ggcaggactt
     1321 ccagcaggat ggtcatgacg gggcggcgct ggaagaagga caggccgaac tcgccttgca
     1381 agaggttgcc caggtagatg aagtactgct gccacatcgg cttatcgagg ccgaactgct
     1441 cgagcatcat ctgttgctgg tcggcgttca ggttctcgtt gatgaacgcc gcgagcggcg
     1501 tgcccggcat cagccggaac atgaagaaca ggatcgtcgt gaccgccagc agcgccagcg
     1561 cgttgtgggt gaagcgctcg aggaccagct tcatcgctga agacgctcct gcggcgagga
     1621 ctttgtcatc ccgagcgcag cgagggagct ttccgggtca gcaaaggtcc ctcgctgcgc
     1681 tcgggatgac accttgtctt gcatgctatt ccgtcgtcag cttttcttgc ttgccgaccg
     1741 ggtaatagag cttgccgccg acgacgcggt agccggcgtc ctgcaggatc ttcttggctt
     1801 cggcgaggcc ggtcttgagc tggtcgaccg cgggatcgtg ccagaagctg agcaccggcg
     1861 agacatgcga attggccggg attgcatagt cctgccaggc cgcggcgacc atcaggcggc
     1921 ggtcgatcga aagcgacagc gcgcgccgga aggcgacgtc gtcgaacggc gggcggcggt
     1981 tgttgaaggc gacgtactcg aagccgatat cgacctcgct cttgatggcg atgtcggggt
     2041 tgtccttggc gaacttgacc agcacctcgg ggtcgccgcc gaagatgccg atgaagttga
     2101 gctcgccacg cttcagcatg ccgagcgtcg cctcggcgtt gggcacgatg cgcatgatcc
     2161 agcgctcgat cttgggcgcc gcgaagtgct ggccgttgcg ctcgagcacg atctcctcgg
     2221 tggggctcca gcgcaccagc ttgaacggcc ccgatccgat cttggacacc tccttgagct
     2281 gctcggcggt ctcgggcttg cccgccaggt ccttcagcac cggctcccag atgtgcttgg
     2341 ggatcaggtt gaccttggcc agcgaggcgg tgaggaaggt cgtgttgggc tgcttgagct
     2401 tgaagcgcaa gccgagatcg ccggtctttt ccatcgacgc gatgtcggtg acgaagggct
     2461 tgtacatcgg cgccttgtcg ccggccggcg cttcgaacga gaagatcacg tcctcgaccg
     2521 tcaccggctt gccgtcgtgc catttcatgc cggcgcgcag cttgacgtcg atggtcttgt
     2581 cgtcgaccca ggcgacgctc tcggcggccc acggccgcgg catgccgtcg gggccgatgc
     2641 gcatgacgcg atcccagatc aggtcggtga cccagctgtc gaccgcgccg ccgatataga
     2701 gcggattggt ggcgttgatc gtctcgttgc tgttgatgat cagatccttc tgcgcgccga
     2761 gcggcacgat gttgaggaag gtccagatgt tgcggatgcc gatgccgctc tggttgacga
     2821 ccgagtcctc cttgaacacc gccttgttga aggcgagcgg gtatttggga tggaccagga
     2881 aggcattggg ctggtcgcgg ttgatgatct cctgcatggc gaacgccgtc ttgcgccgct
     2941 cctcgcggtc gagctgcgtg cgctgcttct cggccagctt gtcgtattcg ggattgaggt
     3001 agccgacgag gttataaccc ttctcgatgt agctcgagtg gtagaggctg tagaggaact
     3061 cgtcgggatc gctgcgctcg ggccggccga ccatgcgcca catcgtgacg tcccacttgt
     3121 cgcggctgaa ccagatgagc tgggtctgcg cctggcgctg caagggcttg acctcgacct
     3181 ccagcccgag ctggcgccat tgctgggcga tcagctgcgc cgcctggtag ctctgcggca
     3241 gagccgcctg cggccaggag tagaggttga gcttgcgcac tttctcggtg gggccttgcg
     3301 caaaggccgt cgtcgccaac cccagcgcgg cgagcccagc cgccgcagca atcgtgagct
     3361 tcctcatgac gcctcctttg ccagcccttg tcgggcatgg cgtgtgtatc ggttctccgg
     3421 aacgcgtaag cccaaattct cgcgcaaggt ggtgccttcg tactcggtgc ggaagatgcc
     3481 gcgccgctgc agctcgggca cgaccaggcg gcagaaatcc tcgaacggct tgggatagta
     3541 gttgcagacg acgttgaagc cgtcggccgc ctcttcctcg agccacgcct ccatctcgtc
     3601 ggccatgtac tcgggcgtgc cgaccagcac gcgatggccg gtgccggcgg cggtgtggcg
     3661 ggcgatctgg cgcaaggtca tgttgccctc gcgcgcggtg cgcaccacca gagcctggcg
     3721 cgccttggcg gcattgctgg gcggcagctc gggcaatggc ccgtcgagcg ggaacttggt
     3781 gaggtcgagt ccgcccgaaa tgtgcgccag cgactgcagc gccacgtcgt cgggcatcag
     3841 cgactgcagg tattcgtagt tctcgcgcgc ctctgccatg gtgcggccga gcacgggcgt
     3901 gaggcccggc atgattttta tatcatcggg ggtgcgcccg tagcgcgcgg cgcgatcctt
     3961 gatatcggca taaaacgcct tcgcctcgtc gatcttggtc tgggcggtga acaccacgtc
     4021 ggcggtgcgg gccgcgagct cgcgcccggc ctcggacgag cccgcctgcg ccaccaccgg
     4081 ccagccctgg ggcgagcggg tgatgttgag cggtcccttg accttgaagt gcttgccgac
     4141 atggtcgagg aagtggacct tgtcgcggtc catgtagatg ccgctcttct tgtcgcgtaa
     4201 aagaccgccg tcttcccagc tgtcccacag gccggtgacg acctcgtaga attcggcggc
     4261 gcgctcgtag cgctcggcgt gcgccaggtg ctcgtcgaag ccgaaattct ccgactcgtc
     4321 ctcgatctgc gacgtcacca ggttccagcc ggcgcgaccg ccgctgatat ggtcgatcga
     4381 ggcgaagcga cgggcgatgt tgtagggctc gttgtaggtc gtggtcgcgg tcgcgaccag
     4441 gccgatccgg ctcgtcacca tggcgagcgc cgccagcgtc gccgtcggct cgagcttgac
     4501 ggtgcgcgag agcttggcgc gggtgcgctc gccgcgcgcc agggcgcggc tgccggccac
     4561 gcccaccgta tcctggaaga agatggtgtc gaacttggct tcttccgcga cctgggtgat
     4621 gtgggcatat tcgcggaaat ccatgtcggc cgtgggcacc gcatcgggat ggcgccagcc
     4681 cgccagatgg ttgcccggca cgctgaagaa gccgcccaat ttgagttggc gggacttagg
     4741 aggcatggct gtcaccccga gcgaagcgag gggcctttga ggcaacagga aagttccctc
     4801 gctgcgctcg ggatgacagt tgcccgtggt cgacgcactc tgtcatcccg agggcggagc
     4861 ccgagggacc tttagggaaa gcaggatagg tccctcgctg cgctcgggat gacagcgggg
     4921 gctgtatcag ccatcggcca ttccagggat taatcatcgg cggccacggc cctcttcacc
     4981 tgaacactgg tgcggttcgc cgtatggatg ttcggcggga tcggcacccc gaggttttcc
     5041 ctgaaagtct tgccctcgta ctcggtgcgg aagatgccgc ggcgctgcag ctcgggcacg
     5101 accatggtca cccactcctc gagcggcttg gggtagtacg ggaacaacag attgaagccg
     5161 tcgcaggcgc cggcctcgag ccaggcctgc atgtcgtcgg cgagctggct cggcgtgcca
     5221 tagaggacgc gatgggcctg gctcatggcc agcacgcggc cgatctcgcg gatggtcatg
     5281 ccgcgcttgc ccatggcgat gatcatgtcc tggcgcgccc gcgcggcatt gctcggcttc
     5341 aattccggca gcggcccgtc gggatcgcag gcaaagatgt cgacgccgcc ggcgagccgc
     5401 gccacgcctg cgatgccgac gccatcgtcg accagcgagc gcagctcttc atatttctcg
     5461 cgcgcttcgg tttcggtgcg gccgacgatc ggcatgatgc cgggaaagat gcggatgtct
     5521 tccggcccgc gcccatagtt caccacacgc gagcgcatat cgttgcagaa a
//
LOCUS       DASWGA010000735         1883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1097008, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000735 DASWGA010000000
VERSION     DASWGA010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1097008"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1086)
                     /locus_tag="VF991_17185"
     CDS             complement(<1..1086)
                     /locus_tag="VF991_17185"
                     /inference="COORDINATES: protein motif:HMM:NF018448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEX9558233.1"
                     /translation="MSEQKVPLTEALEVLLRFGTLMLRAGDTAFRVRDAMGMLAESMG
                     LDGLDLQVTLNSMTATVRRGEAYATLTHEIAPIGINSWRLAELEGLAQAKPRDLTPKQ
                     LGAKLDAIEAVPSLRPVLVVAIAIGLASGSFSYLNGGDLLGTVAAVIAGGLGQALRAL
                     LFVRRLNQYAVTALCAIFTAGLYCILIATLAPTGFGPGQAAGFVFSVLFLVPGFPLVA
                     GLLDLMQHQLAAGIVRLSYAAMILLAAAIGLSAVAAVAGLTVAPAPDAPYRLDALAIA
                     LRALASFVGGCGFAILYNSSGRAVITVGILSLLGNDLRLALHDFGVPLAPATFCGALL
                     AGLLASLVRAWWHEPRIALTVPSIIIMT"
     gene            complement(1104..>1883)
                     /locus_tag="VF991_17190"
     CDS             complement(1104..>1883)
                     /locus_tag="VF991_17190"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008924 - malate dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HEX9558234.1"
                     /translation="NYVFLGAGGAALSLLQKSGIPEAKGFAGFPVSGIWLRCGKPEVA
                     ERHLAKVYGMAAAGSPPMSVPHLDTRHVDGKRWVLFGPYAGFSTKFLKHGSLFDLPLS
                     LRPDNILPLLAVARDNFPLEEYLVGQVFQSSGHRYKALRDFYPNLKKSDWELDVAGQR
                     VQIIKKDKVRTGTLEFGTEIVASADSSIVALLGASPGASTAVWIMVHMLENCFHQQLV
                     GHWVPKLKEMIPSYGHDLKTDAALCERVRKDTAAVLGLQTV"
BASE COUNT          337 a          604 c          680 g          262 t
ORIGIN      
        1 ggtcatgatg atgatgctgg gcacggtcaa ggcgatgcgc ggctcgtgcc accaggcgcg
       61 caccagcgag gccagcaggc cggcgagcag cgccccgcag aaggtggcgg gcgccagggg
      121 cacgccgaaa tcgtgcagtg ccagccgaag gtcgttgccc agcagcgaca ggatgccgac
      181 ggtgatcacg gcgcggcccg agctgttgta gaggatggca aagccgcagc cgccgacgaa
      241 gctcgccagt gcgcgcaagg cgatggcgag cgcgtcgagg cggtagggcg cgtccggcgc
      301 gggcgccacg gtcaagcccg cgacggcggc gacggcggag agcccgatgg ccgccgccag
      361 caggatcatc gcggcgtagg acagccgcac gatgcccgcc gccaactggt gctgcatcaa
      421 atcgagcaat ccggcaacca gcggaaagcc cggcaccagg aacaacaccg agaagacgaa
      481 gccggcggcc tgccctggcc cgaagccggt gggggcgagc gtggcgatga ggatgcagta
      541 gaggccggcc gtgaagatgg cacagagggc ggtgacggcg tactggttga gccgccggac
      601 gaacagcaga gcgcgcaagg cttggccgag gccaccggcg atcacggccg cgacggtgcc
      661 taaaaggtcg ccgccgttga ggtaggagaa cgagcccgag gccaggccga tggcgatcgc
      721 cacgaccagg accgggcgca gggacggtac ggcctcgatg gcatcgagct tggcgccaag
      781 ctgcttcggc gtgaggtcgc gcggcttcgc ttgggcaagt ccctcgagct cggcgaggcg
      841 ccaggagttg atgccgatcg gcgcgatctc gtgcgtcagg gtggcgtacg cttcgccgcg
      901 acgcacggtg gcggtcatgc tgttcagcgt cacctgcaag tccagcccgt ccaggcccat
      961 gctttcggcg agcatgccca tggcgtcgcg cacgcggaac gccgtgtcgc cggcgcgcag
     1021 catcagcgtg ccgaagcgca gcagcacttc cagcgcttcg gtgagcggta ccttctgttc
     1081 cgacatggtc tggacgctga gcgtcagacg gtctggagcc ccagcactgc cgccgtgtcc
     1141 ttgcggaccc gctcgcagag cgccgcgtcc gtcttcaggt catggccgta ggaggggatc
     1201 atctccttca gcttgggtac ccaatggccg acgagctgct ggtggaagca gttctccagc
     1261 atgtggacca tgatccacac cgccgtcgag gcgccaggcg aggcgccgag cagcgccacg
     1321 atcgaggagt cggccgaggc gacgatttcg gtgccgaatt ccagcgtgcc ggtgcgcacc
     1381 ttgtccttct tgatgatctg caccctctgg ccggcgacat cgagctccca atcggatttc
     1441 ttcaggttgg gatagaagtc gcgcagcgcc ttgtagcggt gacccgagct ctggaagacc
     1501 tggccgacca ggtattcctc gagcgggaag ttgtcccgcg ccacggcgag cagcggcagg
     1561 atgttgtcgg gcctaagcga cagcggcagg tcgaacagcg agccgtgctt caggaacttg
     1621 gtcgagaagc cggcataggg tccgaacaac acccaacgct tgccgtcgac atggcgcgtg
     1681 tcgaggtggg gcaccgacat cggcggcgag ccggcggcgg ccatgccgta gaccttagcc
     1741 agatgccgct cggccacctc cggcttgccg cagcgcaacc agatgccgct caccgggaag
     1801 ccggcgaagc ccttggcctc ggggatgccg gacttctgca gcaagctgag cgccgcgccg
     1861 ccggcgccca ggaagacgta gtt
//
LOCUS       DASWGA010000736         5313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_330217, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000736 DASWGA010000000
VERSION     DASWGA010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5313
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330217"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VF991_17195"
     CDS             complement(<1..596)
                     /locus_tag="VF991_17195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEX9558235.1"
                     /translation="MLIDSHCHLDFPELAADEAGVLARARTAGVAGMLTIGTRLDQFD
                     KVRAIAERHDNVWCSVGVHPHEAKEEGQRAPDRLVEATRHPKVVGIGETGLDFYYEHS
                     PRAEQAESFRAHIAAARQSGLPLIVHTRDADQQTGDILEDEHAKGAFTGLIHCFSAGP
                     EMARRALALGLYISISGIVTFKAADSLRAIVSDIPLERL"
     gene            complement(596..2164)
                     /gene="metG"
                     /locus_tag="VF991_17200"
     CDS             complement(596..2164)
                     /gene="metG"
                     /locus_tag="VF991_17200"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEX9558236.1"
                     /translation="MSGRSTYYVTTPIYYVNDVPHIGHAYTTLACDVLARFMRLDGRD
                     VHFLTGTDEHGQKVEKAAAAAGLSPQAFTDKVSQSFRDLIGVMNYSPDNFIRTTEKRH
                     NAASQALWQKLVEAGDIYLGNYAGWYSVRDETYFVESETEVGPDNKRRALSTGAEVEW
                     VEEPSYFFRLSTWAERLMAFYEANPRFIAPESRRNEVISFVKGGLQDLSVSRTSFSWG
                     VPVPGDPKHVMYVWLDALTNYITECGYPDTHNPLWKYWPADLHMVGKDIIRFHCVFWP
                     AFLMAAGVAPPQRVFAHGWWTNEGQKISKSLGNVIDTVELVDAYGLDPVRYFLLREVP
                     FGNDGDFQKRALVGRLNGDLANAYGNLCQRVLSIVAKNCDGKIPAKGAITQADTALLD
                     RAKALLGMVRRELDDQAFHRALTSIWEVIADANRYVDAQAPWALAKTDPVRRDTVLWV
                     LAETIRRVTLLVQPFMPGSAARILDQLAVPAEQRTFAAFDRELVPGRVLPAPQGVFPR
                     FVEVAQSASRGAAS"
     gene            complement(2188..3315)
                     /locus_tag="VF991_17205"
     CDS             complement(2188..3315)
                     /locus_tag="VF991_17205"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF005677.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEX9558237.1"
                     /translation="MARGKTSADASELEKLEWPYDWPPPWRRDRLLGHETAEKTMLAA
                     HQSGRLHHAWLLAGPRGIGKATLAWRFARFLLAGQAQSGLFGASDSLDVPADAPGRSL
                     VDARSHPDLFHLRRTLNPDTGRMRAEIAVDDVRELGAFMHMTPAMGQWRVAIVDAADE
                     MNRNSANAVLKILEEPPPNAVLLIVAHAPGRLLPTIRSRCRRLVLQPLSDEIVVRLLG
                     DYAPGVKEEERAVLARLSEGSIGRALELAGAGSLDLYREMVDVLATLPELDMARLHGF
                     AERFARRGEEANAAWRSLNYLFDSWLKGLARHAAVGGEAAAIVPSERGLQARLASAAS
                     LDRWMEAWEKAADLLSGADRVNLDRKQTVLASFLALQSAMR"
     gene            complement(3321..3968)
                     /gene="tmk"
                     /locus_tag="VF991_17210"
     CDS             complement(3321..3968)
                     /gene="tmk"
                     /locus_tag="VF991_17210"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEX9558238.1"
                     /translation="MAVVSQAPGGRFITLEGGEGAGKSTQISRLKGWLESRGRSVVAT
                     REPGGSPGAEMIRKLLVEGPVERWDGTTEALLHFAARREHLRSTVWPALKRGDWVLSD
                     RFADSTLAYQGHGHGVSAKIFERLYAVAVGDFRPDLTLVLDLPIEIGLARASTRRGSE
                     TRYESLPRDFHARVRAGFLDIAAHHPKRCVVIDATADIDAVAAAIARAVQERLGA"
     gene            complement(3956..5212)
                     /locus_tag="VF991_17215"
     CDS             complement(3956..5212)
                     /locus_tag="VF991_17215"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9558239.1"
                     /translation="MLIALAALAGPSLDAFAQQTDPAAKRQTPQKPPPAKPRATTTTP
                     KPAAKTEAAKTEALPPSQIGIGTLAKQAFMVDPQSSTVLLFKDADKPMHPSSMAKMMT
                     IYILFEELSAGRVKLDTRFRVSERARNMGGSRMFVELGSEVTVEDLIKGMIVLSGNDA
                     CVVVAEGLSGNEDSFAERMTRRGQELGMTGTVFKNASGWPAEGQWTTARDLAVVAWRT
                     IEDFPKLYRYYAETNWTYNNIKQENRNRLLKITPGTDGLKTGHTEEGGFGQASSAVRD
                     GRRLILVVNGLSSMAERAQETARLTEWGFRETTNTTVFRAGDAVVEAPVWLGAQDKVP
                     LVVARPIQITAPTGQTVTPRVIARFDGPLPAPIVKGTKLGTAAVTLPDGKVMEYPLEA
                     GADVARMGVVGRVAALIHHYLFGWLS"
BASE COUNT          793 a         1823 c         1820 g          877 t
ORIGIN      
        1 aggcgctcca gcgggatgtc gctcacgatg gcccgcaggc tgtcggcggc cttgaaggtg
       61 acgatgcccg aaatcgagat gtagaggccg agcgccagcg cccggcgcgc catctcgggc
      121 cccgcgctga agcagtggat caggccggtg aaggcgccct tggcatgttc gtcctcgagg
      181 atgtcgccgg tttgctgatc ggcgtcgcgg gtatggacga tcagcggcag gccgctctgg
      241 cgcgccgcgg cgatatgggc gcggaagctc tcggcctgct cggcgcgcgg gctgtgctcg
      301 tagtagaaat cgaggccggt ctcgccgatg cccaccacct tgggatggcg cgtcgcctcg
      361 accagccggt ccggcgcgcg ctgcccctcc tccttggcct cgtgcggatg cacgccaacc
      421 gagcaccaga cgttgtcgtg gcgctcggcg atggcccgca ccttgtcgaa ctggtcgagc
      481 cgcgtgccga tggtcagcat gcccgccacg ccggctgtgc gggcacgcgc cagcacgccc
      541 gcctcgtcgg cggcaagctc ggggaagtcg agatggcagt ggctgtcgat cagcatcagc
      601 tcgccgcccc ccgactcgcg gattgggcga cctcgacgaa acgcgggaac acgccctgcg
      661 gcgccggcag caccctgccc ggcacgagct cgcggtcgaa ggcggcgaag gtcctttgtt
      721 cggccggcac ggcgagctga tccaggatcc tggccgccga gccgggcatg aagggctgca
      781 ccagcaaggt gacgcggcgg atggtctcgg ccagcaccca cagcacggtg tcgcgccgca
      841 ccggatcggt cttggcgagc gcccacggcg cctgcgcatc gacatagcgg ttggcgtcgg
      901 cgatcacctc ccagatcgag gtcagtgcgc ggtggaaggc ctggtcgtcc agctcgcggc
      961 gcaccatccc cagcagcgcc ttggcgcggt cgagcagagc ggtatcagcc tgcgtgatcg
     1021 cgcccttggc cggtatcttc ccgtcgcagt tcttggcgac gatcgacagc acgcgctggc
     1081 agagattgcc gtaggcgttg gcgagatcgc cgttcagccg gccgaccagc gcgcgcttct
     1141 ggaaatcgcc gtcgttgccg aacggcacct cgcgcagcag gaagtagcgc accgggtcga
     1201 gcccgtaggc atcgaccagc tccaccgtat cgatcacgtt gccgagcgac ttggaaatct
     1261 tctggccctc gttggtccac cagccgtgcg cgaacacgcg ctgcggtggc gcgacgcccg
     1321 ccgccatcag gaaggccggc cagaacacgc agtggaagcg gatgatgtcc ttgccgacca
     1381 tgtgcaggtc ggccggccag tacttccaca gcggattgtg cgtgtcggga tagccgcact
     1441 cggtgatgta gttggtgagc gcgtccagcc agacatacat cacgtgcttg ggatcgcccg
     1501 gcaccggcac gccccacgag aaactggtgc gcgagacgga aagatcctgc aggccgccct
     1561 tcacgaagct gatgacttcg ttgcgccggc tctccggcgc gatgaaacgc ggattcgcct
     1621 catagaacgc cattagccgc tcggcccagg tcgacagccg gaagaagtac gacggctctt
     1681 cgacccattc gacctcggcg ccggtcgaca gagcgcgccg cttgttgtcc ggcccgacct
     1741 cggtctcgct ttcgacgaag taggtctcgt cgcgcaccga ataccagccg gcgtagttgc
     1801 cgagatagat gtcgcccgcc tcgacaagct tctgccacag cgcctgcgag gctgcgttgt
     1861 gccgcttctc cgtcgtgcgg atgaagttgt ccgggctgta gttcatcacg ccgatgaggt
     1921 cgcggaacga ctggctcact ttgtcggtga aagcttgcgg cgaaaggccg gccgcagccg
     1981 cggccttctc gaccttctgg ccgtgctcgt cggtgccggt gaggaagtgc acgtcgcggc
     2041 cgtcgaggcg catgaagcgg gccagcacgt cgcaggcgag cgtcgtgtag gcgtgcccga
     2101 tatggggtac gtcgttcacg tagtagatcg gcgtggtgac gtagtaagtg ctgcggcccg
     2161 acatgactga actccgactg tcgccgctca acgcatcgcc gactggagag ccaggaagct
     2221 cgccagcacc gtctgcttgc ggtcgagatt gaccctatcg gcgccggaca acaggtcggc
     2281 ggccttttcc cacgcctcca tccagcgatc aaggctcgca gccgacgcca gccgcgcctg
     2341 caagccgcgt tccgacggca cgatggctgc agcttctccg cccaccgccg cgtgccgcgc
     2401 caggcccttg agccagctgt cgaacaggta gttcagcgag cgccaggcgg cgttagcctc
     2461 ttcgccgcgg cgcgcgaagc gttcggcgaa accgtgcagg cgcgccatgt cgagctcggg
     2521 caaggtcgcc agcacgtcga ccatctcgcg gtagagatcg aggctgccgg cgcccgccag
     2581 ttcgagcgca cggccgatgc tgccttcgct caatcgcgcc aggaccgccc tctcctcttc
     2641 cttcacgccc ggggcgtagt cgcccagcag gcgcaccacg atctcgtcgg acaacggctg
     2701 cagcacgagc cgccggcagc gcgagcggat cgtcggcagc aaccggccgg gcgcgtgcgc
     2761 cacgatcagc agcacggcat tgggtggcgg ctcctcgagg atctttagca ccgcgttggc
     2821 gctgttgcgg ttcatctcgt cggctgcatc gacgatggcg acccgccatt gccccatcgc
     2881 cggcgtcatg tgcatgaagg cgccgagctc gcgcacgtca tcgacggcga tttcggcgcg
     2941 catgcggccg gtgtcgggat tgagcgtgcg cctcaggtga aacaggtcgg ggtgcgagcg
     3001 ggcatcgacc agcgagcgcc ccggcgcgtc ggccggcacg tcgagactgt cggaggcgcc
     3061 gaacaggcca ctctgcgcct ggccggcgag caggaagcgg gcgaaacgcc aggcgagcgt
     3121 cgccttgccg atgccgcgcg gtcccgccag gagccaggcg tgatgcaggc ggccgctctg
     3181 atgcgcggcg agcatggtct tctcggccgt ctcgtggccc agcaggcggt cgcggcgcca
     3241 cggcggcggc cagtcgtagg gccattcgag cttctcgagc tcgcttgcgt cggcgctcgt
     3301 cttgccccgg gccatgcgcg tcaggctccc agccgttctt gcaccgcgcg cgcgatcgcg
     3361 gcggcgacgg cgtcgatgtc tgctgtagca tcgatcacca cgcagcgctt gggatggtgc
     3421 gcggcgatgt cgagaaagcc ggcgcggacg cgggcatgga aatcgcgcgg caggctctca
     3481 tagcgggtct cgctgccccg ccgtgtcgag gcgcgcgcca gaccgatctc gatcggcagg
     3541 tcgaggacga gggtgagatc gggccggaag tcacccactg ccaccgcgta gagccgctcg
     3601 aatatcttgg cgctcacgcc gtggccgtgg ccctgatagg ccagggtcga atcggcaaag
     3661 cggtcgctca gcacccagtc gccgcgcttg agcgccggcc acaccgtcga gcgcagatgc
     3721 tcgcgccggg cggcgaaatg cagcaatgcc tcggtcgtgc cgtcccagcg ctcgacagga
     3781 ccttccacca ggagcttgcg gatcatctcg gcgcccggcg agccgccggg ctcgcgcgtc
     3841 gccacgaccg agcggccacg gctttcgagc cagcccttca gccgcgaaat ctgcgtcgat
     3901 ttccccgctc cttcgccgcc ttccagggtg atgaaccgcc cgcctggggc ttggctcacg
     3961 acagccagcc gaacaggtaa tggtggatca gcgccgccac gcggccgacc acgcccatgc
     4021 gcgccacatc ggcgcccgcc tccagcgggt attccatcac ctttccgtcg ggcagcgtga
     4081 cggctgccgt gccgagcttg gtgcccttga cgatcggcgc cggcagcggt ccgtcgaagc
     4141 gcgcgatcac gcgcggcgtc acggtctgcc cggtcggcgc cgtgatctgg atggggcgcg
     4201 cgacgaccag cggcaccttg tcctgggcgc ccagccagac cggcgcctcg acgacggcgt
     4261 cgccggcgcg gaagaccgtg gtgttggtgg tttcgcggaa gccccattcc gtcagccgcg
     4321 ccgtctcctg ggcgcgttcg gccatcgagc tcaagccgtt caccaccagg atgagccgcc
     4381 gtccgtcccg caccgccgag cttgcctggc cgaagccgcc ctcctcggtg tggccggtct
     4441 tcaggccgtc ggtgcccggc gtgatcttga gcaggcggtt gcggttctcc tgcttgatgt
     4501 tgttgtaggt ccagttggtc tcggcgtagt agcggtagag cttcgggaaa tcctcgatgg
     4561 tgcgccacgc caccacggcg aggtcgcgcg ccgtcgtcca ctggccttcg gccggccagc
     4621 ccgaggcgtt cttgaacacc gtgccggtca tgccgagttc ctggccgcgc ctggtcatgc
     4681 gttcggcaaa gctgtcctcg ttgcccgaca ggccttcggc gacgacgacg caggcgtcgt
     4741 tgcccgacag cacgatcatg cccttgatca gatcctcgac cgtgacctcg ctgccgagct
     4801 cgacgaacat gcgcgagccg cccatgttgc gcgcccgctc gctcacccgg aaacgcgtgt
     4861 cgagcttgac ccggccggcg ctgagttcct cgaacaggat gtagatggtc atcatcttgg
     4921 ccatcgatga cgggtgcatc ggcttgtcgg cgtccttgaa cagcagcacc gtcgagcttt
     4981 gcgggtcgac catgaaggcc tgcttggcca gcgtgccgat gccgatctgc gacggcggca
     5041 acgcctcggt cttggcggcc tcggtcttgg cagcaggttt cggcgtggtg gtcgtcgcgc
     5101 gcggcttggc tggcggcggc ttctgcggcg tctgtcgctt ggccgccggg tcggtctgtt
     5161 gcgcgaaggc gtcgagcgac ggcccggcga gggccgctag cgcgataagc accgccaatg
     5221 ggcgcagtcg atcaattagc cacgacacga gcatcaccat agcctgaccg cttcagcctg
     5281 tcggcgacaa tgccggcggc atccggggtt gtg
//
LOCUS       DASWGA010000737         4723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_720233, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000737 DASWGA010000000
VERSION     DASWGA010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4723
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_720233"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..1042)
                     /locus_tag="VF991_17220"
     CDS             complement(173..1042)
                     /locus_tag="VF991_17220"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX9558240.1"
                     /translation="MRLCTIISGGKPAVGVKTGNGKIIDLSKQMPRGPKSVVEILAGG
                     KKLQAEVAKACAKPKAGAAVSEKSAKYLPPIPNPGKILCIGLNYRKHAEETGSPIPGY
                     PVVFCRFDNTLVPHNGKMPRPTASDQLDWEAELTIVIGKKCRNVPKEKALGVIAGYAC
                     FNDGSVRDWQFKSSQWTLGKNFDGTGGFGPDIVTSDELPPGAAPLRIMTRVNGEVMQD
                     SNTDDLIFDVPTLVHELSKAMTLDPGDIIITGTPSGVAVARKPQPWLKPGDVCEVEIE
                     KIGVLRNPIVQGA"
     gene            1138..1764
                     /locus_tag="VF991_17225"
     CDS             1138..1764
                     /locus_tag="VF991_17225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558241.1"
                     /translation="MRSPPFFAALFLAFPAAAQLVVPFTTPDGRVACTQGQTGIGRPP
                     DWRAIADPDGPNGWALAEMAGDPTDLRFPLCISEQAVTRDLDATLRFKPLSGTRARVA
                     GLIFRAQSANDYYVVRTNALDNSVRLYRVDKGKRSQLAGKEAPLASDKWHSLRVIASN
                     DRFEVALDGKPVFEVTDRSLLLAGAMGVWSQADSVTHYGSLLVGPPLR"
     gene            complement(1779..2462)
                     /locus_tag="VF991_17230"
     CDS             complement(1779..2462)
                     /locus_tag="VF991_17230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018114929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEX9558242.1"
                     /translation="MKLPRPPAAVIFDMDGLLFDTERLYGEAILSAASEVGCAMSRDV
                     FHQLVGRSREVNHRFLLEYYGADYPLEALIAAWGRHFEVRAAAGLPLKPGAVELLDLL
                     DELRLPRAIATSSSHARVRRNLVSHGLTERFHSVVAHGDYANGKPAPDPFLKAAERLG
                     VAPKLCLALEDSHNGIRSASTAGMMTIMVPDLVPPTDEIHGLCTHVAADLHDVHRLVD
                     AGRPRSGLV"
     gene            complement(2472..3089)
                     /locus_tag="VF991_17235"
     CDS             complement(2472..3089)
                     /locus_tag="VF991_17235"
                     /inference="COORDINATES: protein motif:HMM:NF018288.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase family protein"
                     /protein_id="HEX9558243.1"
                     /translation="MIDHSADQHAARTHDKMREVLMDPAAPGPAVHYHMIRGGSHARN
                     VTVWQPGTVGGEYIKTYGHYHVGELDETYWVLQGEGIAIIQKRADGKDGPIDNEIDSV
                     FAVRVKSGDALYMPSGWGHLVVNIGESFFVTADDSPVDFGENDGVSLPGHADYEPVRR
                     LRGFAYYVVESRGEPRLVRNPLYRKVPEITIVGTRDYPLKRTARP"
     gene            complement(3124..3933)
                     /locus_tag="VF991_17240"
     CDS             complement(3124..3933)
                     /locus_tag="VF991_17240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
                     /protein_id="HEX9558244.1"
                     /translation="MHPTMMPLAKCPRETLAAVEGVLTDIDETVSTQGRLTAEAYGAL
                     ETLKKAGLRVIPVTGRPAGWCDHIARFWPVDAVVGENGAFWMWLDHKAGKLTTRFVQS
                     DAERAEGRRRLEAVRAQVLREVAGAGIASDQPYRAADLAIDFCEDVPALPHAEIVRIV
                     KIFEAHGARAKVSSIHVNGWFGDYDKLTTSRLMMRELFGVDLDAARPRYVFAGDSPND
                     APMFGFFPNAVGVANVSDFAADMDHLPHWVTAARSGAGFVELAGALVAARR"
     gene            3988..>4723
                     /locus_tag="VF991_17245"
     CDS             3988..>4723
                     /locus_tag="VF991_17245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008039619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEX9558245.1"
                     /translation="MIPRYSRPPMAAIWAPENRFRIWFEIEAHACDAMAALGIIPKEA
                     ASAIWEGGKKAMAALKADPQGNVDKIDAIERVTKHDVIAFLTWLGEFIGPQSRFVHQG
                     MTSSDVLDTSFAVQLTQAADLLIEDVDALLAALKKRALQYKDTPTIGRSHGIHAEPTT
                     FGVKLAGHYAAFSRNRARLVAARAEIATCAISGPVGTFANVDPRIEEHVAKKLGLAVE
                     PVSTQVIPRDRHAAFFAALAVAAASIE"
BASE COUNT          744 a         1632 c         1550 g          797 t
ORIGIN      
        1 gcttgactgc tggaggcgcg ccactccagt ggcgcgtcat gatcttccgg accgcgcgcg
       61 tctcgcgcgc tcatgaggcg cgcgggacgc gcgcggtccg catgagcatg aaggatcgcg
      121 ccacttcagc gcggagttta ctccgcgcgc agtggcgcgc ccccagcgaa gactacgccc
      181 cctgcacgat cggattgcgc agcacgccga tcttctcgat ctcgacctcg cagacgtcgc
      241 ccggcttcag ccagggctgt ggcttgcgcg ccacggccac gcccgagggc gtgccggtga
      301 tgatgatgtc gccgggatcc agggtcatgg ccttgctgag ttcgtgcacc agggtcggca
      361 cgtcgaagat caggtcgtcg gtgttgctgt cctgcatgac ctcgccgttg acgcgggtca
      421 tgatgcggag cggtgccgcg cccggcggca gctcgtcgga cgtcacgatg tcggggccga
      481 agccgccggt gccgtcgaag ttcttgccga gcgtccactg gctgctcttg aactgccagt
      541 cgcgcaccga gccgtcgttg aagcaggcat agcccgcgat cacgccgagc gccttctcct
      601 tgggcacgtt gcggcacttc ttgccgatca cgatggtgag ctcggcttcc cagtcgagct
      661 gatcggaggc ggtgggacgc ggcatcttgc cgttatgcgg caccagcgtg ttgtcgaagc
      721 ggcagaacac caccgggtag cccgggatcg ggctgccggt ctcctcggcg tgcttgcggt
      781 agttgagacc gatgcacagg atcttgcccg ggttggggat cggcggcagg tatttggccg
      841 acttctccga caccgcggcg ccggccttgg gcttggcgca ggccttggcg acctcggcct
      901 ggagcttctt gccgccggcc aggatctcga cgacggactt cggtccgcgc ggcatctgct
      961 tggaaaggtc gatgatcttg ccgttacccg tcttgacgcc gacggccggc ttgccgccgc
     1021 tgatgattgt gcaaagacgc atgctgttcc cccttttttc actgaattcg atcgggccgt
     1081 aaactcctcc gtcccacacg ggcggtcaag cgcgacgcgc tctgataggc tcgcggcatg
     1141 cgcagcccgc cgttcttcgc cgccctcttc ctcgccttcc ccgccgccgc ccagctggtc
     1201 gtgccgttca ccaccccaga tggacgggtc gcctgcaccc agggccagac cggcatcggc
     1261 cggccaccgg attggcgggc catcgccgac cccgacggtc ccaacggctg ggcgctggcg
     1321 gaaatggccg gcgacccgac cgacctgcgc ttcccgctgt gcatttccga gcaggcggtg
     1381 acccgcgacc tcgatgcgac cctgcgcttc aagccgctct ccggcacccg cgccagggtt
     1441 gccggcctga tattccgggc gcagagcgcc aacgactatt acgtcgtgcg gaccaatgcg
     1501 ctcgacaact cggtgcgcct ctatcgcgtg gacaagggca aacgcagcca gctcgccggc
     1561 aaggaggcgc cgcttgcctc cgacaaatgg cattcgctca gggtgatcgc gtccaacgac
     1621 cgcttcgagg tggcgctgga cggcaagccg gtgttcgagg tcaccgatcg cagcctgctg
     1681 ctggccggcg ccatgggcgt ctggagccag gccgacagcg tcacccacta cggctccctg
     1741 ctggtcgggc cgccgttgcg ctgaagcgcc gccggcgatc agaccaagcc agagcgcggt
     1801 ctcccggcat cgaccaggcg gtggacgtca tgcagatcgg ccgcgacatg cgtgcagagt
     1861 ccatggatct cgtcggtcgg cggcaccagg tcggggacca tgatcgtcat catgccggcg
     1921 gtcgatgccg agcggatgcc gttgtgggag tcctccaatg ccagacagag cttgggcgcc
     1981 acgcccagcc gctcggccgc cttcaggaag ggatcggggg caggcttgcc gttggcgtag
     2041 tcgccgtgtg ccaccacgct gtggaaacgc tccgtcagcc catgcgagac cagattgcgc
     2101 cggaccctgg catgcgagga cgacgtggcg atggcccgcg gcaggcgcag ctcgtccagt
     2161 aggtcgagaa gttcgaccgc gcctggcttc agcggcaggc cggccgccgc gcgcacctcg
     2221 aagtgccgcc cccacgcggc aatcaacgcc tcaagcggat agtccgcgcc gtagtactcc
     2281 agcaggaaac ggtggttcac ctcccgggac ctgccgacca gctggtggaa gacgtcgcgg
     2341 ctcatggcgc agccgacttc agaagcggcc gacaggatcg cctcgccgta aagtctttcg
     2401 gtgtcgaaca gcagcccgtc catatcgaag atgacggctg ccggcggccg cggaagtttc
     2461 atcgcgcgtc gctaggggcg cgccgtccgc ttcagcggat agtcgcgtgt gccgacaatc
     2521 gtgatttccg gcactttcct gtacagcgga ttgcgcacaa gcctgggttc gcctcggctt
     2581 tcgaccacgt aataggcgaa gccgcgcagg cgccttacgg gctcgtagtc ggcgtggcca
     2641 ggcagcgaga cgccgtcatt ctcgccgaaa tcgaccggcg agtcgtcggc agtgacgaag
     2701 aagctctcgc cgatattgac cacgagatgg ccccagccac tcggcatgta gagcgcgtcg
     2761 ccggatttca cgcgcacggc aaagacgctg tcgatctcgt tgtcgatcgg cccatctttt
     2821 ccgtcggccc gcttctggat gatggcaatg ccctcgcctt gaagcaccca ataggtctcg
     2881 tcgagctcgc cgacatgata gtggccgtag gtcttgatgt actcgccgcc gaccgtgccc
     2941 ggctgccata ccgtcacgtt gcgcgcatgc gagccgccgc ggatcatgtg gtagtgcacg
     3001 gcaggaccgg gcgccgcagg atccatcagc acctcgcgca tcttgtcgtg cgttcttgcc
     3061 gcgtgctggt cagccgaatg atcgatcacc ccgtcctccg aatgataccg tcggtactgt
     3121 agactatcga cgcgccgcaa ccagcgcacc cgccagttcg acgaagcccg cgccggagcg
     3181 cgccgccgtg acccagtgcg gcaggtggtc catgtcggcc gcgaagtcac tcacgttggc
     3241 cacgccgacg gcgttgggaa agaaaccgaa catcggcgca tcgttgggcg aatcgccggc
     3301 gaacacgtag cgcggccggg ccgcgtcgag atcgactccg aacagctcgc gcatcatcag
     3361 ccggctggtg gtgagcttgt cgtagtcgcc gaaccagccg ttgacatgaa tcgagctcac
     3421 cttggcccgg gcgccatgcg cctcgaagat ttttacgata cgcacgatct cggcgtgcgg
     3481 cagcgccggc acgtcctcgc agaaatcgat ggcgagatcg gccgcgcgat agggctggtc
     3541 ggaggcgatg cccgcccccg ccacctcgcg caacacctgg gcccgtaccg cttccagccg
     3601 gcgccttcct tcggcccgct cggcgtcgct ctgcacgaag cgcgtcgtga gcttgccggc
     3661 cttgtggtcg agccacatcc agaaggcgcc gttctcgccc accacggcgt cgaccggcca
     3721 gaagcgggcg atgtggtcgc accagccggc cggccgcccg gtcaccggga tcacgcgaag
     3781 tccggccttt ttcagggttt ccagggcgcc gtaggcctcg gcggtgagcc ggccctgagt
     3841 ggaaacggtc tcgtcgatgt cggtcagcac gccctcgacg gcggccaggg tctcgcgcgg
     3901 acacttggcc aggggcatca tcgtcgggtg catgatgagg cacttctaac atggcgccgc
     3961 ggccccttcg gggctaaaag cccggccatg attccccgct attcccggcc gccgatggcg
     4021 gccatctggg cgcccgagaa ccgcttccgc atctggttcg aaatcgaggc gcatgcctgc
     4081 gacgccatgg cggcgctggg catcatcccc aaggaggcgg cctccgcgat ctgggagggc
     4141 ggcaagaagg cgatggccgc gctcaaggcc gacccccaag gcaatgtcga caagatcgac
     4201 gccatcgagc gggtgaccaa gcacgacgtg atcgccttcc tgacctggct gggcgagttc
     4261 atcgggccgc agtcgcgttt cgtgcaccag ggcatgacct cgtcggacgt gctcgacacc
     4321 agcttcgccg tccagctcac ccaggccgcc gaccttctga tcgaggacgt cgacgcgctc
     4381 ctggcggcat tgaagaagcg cgcgctgcaa tacaaggaca cgccgaccat cggccgcagc
     4441 cacggcatcc acgccgagcc cacgaccttc ggcgtcaagc tcgccggcca ttacgccgcc
     4501 ttttcccgca accgggcgcg gctggtggcg gcgcgcgccg agatcgcgac ctgcgccatc
     4561 tcgggcccgg tcgggacctt cgccaatgtc gatccgcgga tcgaggagca tgtcgccaag
     4621 aagctcggcc ttgccgtcga gccggtctcg acccaggtga tcccgcgcga ccggcacgcc
     4681 gcgttcttcg cagcgctggc ggtcgcggcc gcctcgatcg aga
//
LOCUS       DASWGA010000738         2461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2364372, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000738 DASWGA010000000
VERSION     DASWGA010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2364372"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VF991_17250"
     CDS             <1..427
                     /locus_tag="VF991_17250"
                     /inference="COORDINATES: protein motif:HMM:NF020478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1849 family protein"
                     /protein_id="HEX9558246.1"
                     /translation="FSEPEGQTVALPVGTLFPVAIARETIRQAKAGEGGFDALFFFGE
                     KVKPPQSVNVVIGKVPKRLGDVKIPDGADQLADGRTRIYYRAGFFDAQSKGQGEPAFE
                     MSSITLDNGIELYGTHEESESGIEYRITRLEPLPKPECN"
     gene            534..2045
                     /locus_tag="VF991_17255"
     CDS             534..2045
                     /locus_tag="VF991_17255"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008714 - AMP nucleosidase activity
                     [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0044209 - AMP salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HEX9558247.1"
                     /translation="MTTGAVSREIDYVAPNDAERSSMTPEQAVDRLEELHTAASNALR
                     EALARYTESGTVPTAQERSAFRYPELCVDWQPSGALRFTRRAWAKFQAPGLYSTTVTQ
                     PAFFRQYLLEQLRPLSEEFGATIEVGSSEQEIPYPFVTEAGDEFIHGDLSVSELARHF
                     PTPVLANVGDEIADGTWVFETRKSRPLALFDALRVDYSLRRLLHYTGTDWRTIQPWIL
                     FTNYQRYVDHFLTWAMEELAKPDGAYTQLVLPGGAVVRRGDDMTVADAAVLAAPWHRF
                     QMPAYNLLRGDGLGGITIVNIGVGPSNAKTATDHLAVLRPHCWLMIGHCGGLRQSQTI
                     GDYVLAHGYMRRDRILDDLVPPEVPVPALAEVQVALQQAAERVTGERGDALKRRLRTG
                     TVVSYDDRNWELRWSQERRRINHGRAIAVDMESATLATQGYRLRVPYGTLLCVSDKPL
                     HGEIKLPGAATRFYRRAVGEHLRIGLEALSLLRGELGSLHSRKLRSFDEPPFR"
     gene            complement(2149..>2461)
                     /locus_tag="VF991_17260"
     CDS             complement(2149..>2461)
                     /locus_tag="VF991_17260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX9558248.1"
                     /translation="SGRRLSATGIADAAQSGDRDAAECLALYCDRLARALASVMNLID
                     PHVIVLGGGLSKMKPLYRRVPELWRGYLFSEPDSIVTRLLPPLHGDSSGVRGAAWLWP
                     G"
BASE COUNT          415 a          849 c          812 g          385 t
ORIGIN      
        1 cttctccgag cccgagggcc agacggtggc gttgccggtc ggcacgctgt ttcccgtcgc
       61 catcgcccgc gagacgatcc gccaggccaa ggcgggcgag ggcggcttcg acgcgctgtt
      121 cttcttcggc gagaaggtca agccgccgca gtcggtcaac gtggtgatcg gcaaggtgcc
      181 caagcggctg ggcgacgtga agattcccga tggcgcggac caactggccg acggccggac
      241 gcggatctac taccgcgccg gctttttcga cgcccagtcc aagggccagg gcgaacccgc
      301 cttcgagatg agcagcatca ccctcgacaa cggcatcgag ctatacggca cgcacgagga
      361 aagcgagagc ggcatcgaat accgcatcac ccggctcgag ccgctgccca agccggagtg
      421 caattagcaa tagttcttat cgggccgcgg aactcccttt tctgtcatcc tgagcgcagc
      481 gaaggatctc atcgccagtt gccaagagca tgagatcctt cgctgcgctc aggatgacaa
      541 cgggcgcggt ctcgcgggag atcgattacg tggcaccgaa cgacgctgaa cgcagcagca
      601 tgacacccga acaggcggtc gatcgcctgg aggagctcca taccgccgcc agcaacgcgc
      661 tgcgcgaggc gttggcgcgc tataccgagt cgggcactgt gccgacggcg caggaaagaa
      721 gcgcgttccg ctatcccgag ctgtgcgtcg actggcagcc ttccggcgcc cttcgcttca
      781 ctcgccgcgc ctgggccaag ttccaggcgc ccggccttta ctcgacgacc gtgacgcagc
      841 cggcgttctt ccgccaatac cttctcgagc aattgcgacc gctcagcgag gagttcggcg
      901 ccacgatcga ggtcggcagc agcgaacagg agatccccta tccgttcgtg acggaagccg
      961 gcgacgaatt catccacggc gatctctcgg tctccgagct ggcgcgccat ttcccgacgc
     1021 ccgtgctcgc caatgtcggc gacgagatcg ccgacggcac ctgggtgttc gagacgcgga
     1081 agtcccggcc gctcgccctg ttcgacgcgc tcagggtcga ctactcgctg cgccgcctgc
     1141 tgcactacac ggggaccgat tggcggacca tccagccgtg gatcctgttc accaactacc
     1201 agcgctacgt cgatcatttc ctgacctggg cgatggagga actcgccaag ccggacggcg
     1261 cctacacgca actcgtcctg ccgggcggcg cggtcgtgcg gcgcggcgac gacatgacgg
     1321 tggccgacgc cgccgtcctc gccgcgccct ggcatcgctt tcagatgccg gcctacaacc
     1381 tcctgcgggg cgacggcctg ggcggcatca ccatcgtcaa catcggcgtc ggcccgtcca
     1441 acgccaagac ggcgaccgac catctggcgg tgctgcgccc ccattgctgg ctgatgatcg
     1501 gccactgcgg cggcctgcgg cagtcgcaga ccatcggcga ctatgtgctg gcgcacggct
     1561 acatgaggcg cgatcgcatc ctcgacgacc tcgtgccgcc ggaagtgccg gtgccggccc
     1621 tggccgaagt gcaggtggcg ttgcagcagg ccgccgaacg ggtgacgggg gaacgcggcg
     1681 atgcgctgaa gcggcggctg cgcaccggca ccgtggtgag ctacgacgac cgcaactggg
     1741 aactgcgctg gtcgcaggaa cggcggcgca tcaatcatgg gcgcgccatc gcggtcgaca
     1801 tggaaagcgc caccttggcg acgcagggct atcggttgcg cgtgccttac ggcaccttgc
     1861 tctgcgtctc cgacaagccg ctgcatggcg agatcaagct gcccggcgcg gccacgcgct
     1921 tctatcggcg ggcggtcggc gagcacctgc gcatcggcct ggaggcgttg agcctgttgc
     1981 gcggcgaact gggttcgctg cattcgcgca agctccgcag cttcgacgag ccgccgtttc
     2041 gatagccagt cgtcctgagc gcagcgaagg acctcatcgc cgcttgccac cggcatgaga
     2101 tccttcgctg cgctcaggat gacagaggtt cgctgacgcg cgcccagcct aacccggcca
     2161 cagccatgca gcaccgcgca cgccgctcga atcgccgtgc agtggcggca agagtcgggt
     2221 gacgatgctg tcgggctcgg agaacaggta gccccgccac agctcgggca cccgccggta
     2281 gagcggcttc atcttcgaca gcccgccgcc cagcacgatg acgtgcgggt cgatcaggtt
     2341 cattacgctc gcaagcgcgc gcgccagccg gtcgcagtaa agcgccaggc actcggccgc
     2401 gtcgcggtcg ccggattggg ccgcatcggc gatcccggtg gcgctgagcc tgcggccgct
     2461 g
//
LOCUS       DASWGA010000739         5385 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1614028, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000739 DASWGA010000000
VERSION     DASWGA010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5385
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1614028"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1283
                     /locus_tag="VF991_17265"
     CDS             <1..1283
                     /locus_tag="VF991_17265"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HEX9558249.1"
                     /translation="IVIDHHKAEVALPDAIAVVDPNRLDDASPHKQMAAVGVAFLLCV
                     GINRALREAGWYGDARPEPDLRQWLDLVALGTVCDVVPLTGVNRALVRHGLHVMAQRR
                     NAGLAALADVARLREPPGAYHLGFLLGPRVNAGGRVGQADLGARLLSSDDPHEVGALA
                     LRLDEFNAERRTIEREVLDQAITRIEGLYGPDRKGLPSALVIESEGWHVGVIGIVASR
                     LVERYGRPAFVIGMDGELGKGSGRSVKGVDLGAAVIAARQSGLLLNGGGHAMAAGLTV
                     ARDRLPDLAKFLDERIAPQLGTAPAVRELGIDAALAPGAATQELVGMIERAGPFGAGN
                     ALPRFALTSVRVNYAQPVGEGHVRCSLVGAERGKVEAIAFRAGQTALGPALLDPARPV
                     LHVAGALRIDRYGGRESVRLQIDDAAAATGSVLA"
     gene            complement(1305..2201)
                     /locus_tag="VF991_17270"
     CDS             complement(1305..2201)
                     /locus_tag="VF991_17270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558250.1"
                     /translation="MIGFLNGGGPSRSVRIMAAFREGLAETGYLEGQNLTIEYRWAEG
                     FYDRLPALAADLVGRKVDVIAATGSPAAASAAKKATSTIPIVFIGGDDPVADGLVASL
                     ARPGGNLTGVSSLVVELNPKRFELLRELVPQARVIGMLVNPNNPASERVTRDVQEAAR
                     ADGVQLVVVKASSESEIDTAFASVVQRQAGALLVATDPFISGRNEQVTALAARHGIPA
                     IYGWRDFTAAGGLISFGPSRVTSYRQIGVYAGKILKGARPADLPVLQPAIFELVINTK
                     TAKALGLAVPQLLLARADELIE"
     gene            2464..2539
                     /locus_tag="VF991_17275"
     tRNA            2464..2539
                     /locus_tag="VF991_17275"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2498..2500,aa:Glu,seq:ttc)
     gene            complement(2565..3269)
                     /locus_tag="VF991_17280"
     CDS             complement(2565..3269)
                     /locus_tag="VF991_17280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX9558251.1"
                     /translation="MPIRILSISLGSATLSGRHHNLNIRRARGDGGRSAIGVDSAMAA
                     PLPVVAIGASGAAGIGDLRRLLGSLPRDIAAAVLVVLHRPVDRISHLRELLAQATALP
                     VVIAADFAGLEAATCYIGEPDQHLTLLDKRLAGLVPARGNSHRNRTIDLLFESVARHA
                     GTKAIGVVLSGLSDDGSRGLAAINHHGGRVMVVDPTGHGMPENAIAYNGPIDLVGTPE
                     QIAGAISASLHPSLHR"
     gene            3321..3797
                     /locus_tag="VF991_17285"
     CDS             3321..3797
                     /locus_tag="VF991_17285"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9558252.1"
                     /translation="MAWKTPRLMAEHHNAPTAGEQPAAAQPRLLIVEDELMVAWGLVD
                     TVHELGWKVCATVRTQDAAVESALQLKPDAILMDYRLGDGGDGLAAARRIREAADVPI
                     IFCTAYVAGLRPEVLSVARAHLISKPVRSSSLREALAWATDLGKPTAKPGEGETLV"
     gene            complement(3794..4339)
                     /locus_tag="VF991_17290"
     CDS             complement(3794..4339)
                     /locus_tag="VF991_17290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9558253.1"
                     /translation="MQPAGLAVQVHESAVAFLNARPRAQAGCIVTDIRMPGMDGLELR
                     RKLLADHDDTPVILMTGHADVALAVEAMKAGAFNFFEKPFDNEILLEAIRAALTRRSG
                     ERARSQRSAEVRRCLEFLSERERQVLDGLVAGKSNKTIAYDLSLSPRMIEGYRAGLMT
                     RLDADSLSTLIRTVLADPSAI"
     gene            4463..4738
                     /locus_tag="VF991_17295"
     CDS             4463..4738
                     /locus_tag="VF991_17295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEX9558254.1"
                     /translation="MKQFALAIVLSAAMAVPATAWAKAACKANPKAEWMSETDAKAKL
                     EAQGYKIAKFKIDGNCYEIYGTNKDGKKVEIYFDTRSLDVVKAEIEK"
     gene            4743..5270
                     /locus_tag="VF991_17300"
     CDS             4743..5270
                     /locus_tag="VF991_17300"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX9558255.1"
                     /translation="MTPRRRIRVWDVVVRLLHWALAVLVAVDLLRDDGDRAHRLVGYA
                     AVVVVLLRLGWAAVVRSHGSLAGLRPSVSQSWVYLRLVLRGQPPRSLGHNPLGLWMVW
                     LLWILVLLLGVTGWMSRLDAFWGDDRVHDAHALLADMMLIAVILHLAGVAMMSWLWRE
                     NLPASMITGYKRPLR"
BASE COUNT          860 a         1770 c         1839 g          916 t
ORIGIN      
        1 tgatcgtgat cgaccaccac aaggccgagg tcgcgctgcc cgacgcgatc gccgtcgtcg
       61 atcccaaccg gctcgacgat gctagcccgc acaagcagat ggcggcagtc ggcgtggctt
      121 tcctgctgtg tgtcggcatc aaccgcgcgc tgcgcgaggc gggctggtac ggcgatgcgc
      181 gacccgagcc cgacctgcgc caatggctcg atctcgtggc gctcggcacg gtgtgcgatg
      241 tcgtgccgct caccggcgtc aaccgcgcgc tggtgcgcca cggcttgcac gtgatggcgc
      301 agcggcgcaa tgccggcctg gcggcgctgg ccgacgtggc ccgcctcagg gaaccgcccg
      361 gcgcctatca cctgggcttc ctgctggggc cgcgcgtcaa cgccggcggc cgggtcgggc
      421 aggccgatct cggcgcgcgg ctgctgtcga gcgacgatcc gcatgaggtc ggcgcgctgg
      481 cgctgcgcct cgacgagttc aacgccgagc gccgcaccat cgagcgcgaa gtgctcgacc
      541 aggcgatcac ccgcatcgag ggcctgtacg ggcccgaccg caagggcctg ccgtcggcgc
      601 tggtgatcga aagcgagggc tggcacgtcg gcgtgatcgg catcgtggcg agtcgcctgg
      661 tcgagcgcta cggccggccg gccttcgtga tcggcatgga cggcgagctc ggcaagggct
      721 cgggtcgctc ggtgaagggc gtcgatctcg gcgcggcggt gatcgccgct cgccaatccg
      781 gcctgctgtt gaacggcggc ggccacgcca tggcggccgg cctcaccgtg gcgcgcgacc
      841 ggctgcccga cctcgccaaa ttcctcgacg agcgcatcgc cccgcagctt ggcacggcgc
      901 cggcggtgcg cgagcttggc atcgatgccg ccctggcgcc cggcgcggcg acgcaggagc
      961 tggtcggcat gatcgagcgt gccggcccgt tcggcgccgg caacgcgctg ccgcgcttcg
     1021 cactcaccag cgtgcgggtg aactacgccc aaccggtcgg agagggccat gtccgctgca
     1081 gcctggtcgg cgccgagcgc ggcaaagtcg aagccatcgc ctttcgcgcc ggccagacgg
     1141 cgctcgggcc cgcgctgctc gacccggcgc ggccggtgct gcatgtcgcc ggcgccctgc
     1201 gcatcgaccg ctatggtggc cgcgagagcg tgcgcctgca gatcgacgat gccgccgccg
     1261 cgacgggctc cgttctggcg tgatctcgcc aaacgcccgt cgcttcactc gatcagctcg
     1321 tcggcgcggg cgagcagcaa ttggggcacc gcgaggccga gtgctttcgc cgtcttcgtg
     1381 ttgatgacca actcgaaaat cgccggttgc aggaccggca gatcggcggg cctggcgccc
     1441 ttgaggatct tgccggcata aacgccgatc tgacgatagg aggtcacgcg gctcggtcca
     1501 aagctgatca ggccgccggc cgcggtgaag tcccgccacc catagattgc tggaatgccg
     1561 tggcgcgccg ccagcgccgt gacctgctcg ttccggccgc taatgaatgg atcggtcgcg
     1621 acgagcagcg ccccggcttg ccgttggaca acggaggcga aggcggtgtc gatctcgctt
     1681 tcgctgctgg ctttcacgac aacgagctgt accccgtccg cgcgcgccgc ttcctgcaca
     1741 tctcgcgtca cgcgctcgct cgccggattg ttcggattca cgagcatgcc gatcaccctg
     1801 gcctggggaa ccagctcgcg cagcagctcg aaccgcttgg gattgagctc gacgaccagc
     1861 gagctgacgc ccgtgaggtt gccgcccggc cgggccaggc tggcgacaag gccgtcggcg
     1921 accggatcgt cgccgccaat gaagacgatc gggatcgtcg aggttgcctt tttcgcagca
     1981 cttgcagcag cggggctgcc ggttgccgcg atcacatcga ccttgcggcc gaccaggtcg
     2041 gcggccagtg ccggtaggcg atcatagaag ccctccgccc agcggtattc gatcgtcagg
     2101 ttttgtccct cgagatagcc ggtttcggcc agtccttcgc gaaaggccgc catgatccgg
     2161 acagaccggc tgggcccgcc gccgttcaga aagccgatca cgggcctcgt ggtctgctgc
     2221 gcgccgagga gcgacggcca tacggtcgac gccgtcgccg ctcctccaag aagcgtagtg
     2281 aactggcgtc gcttgatcta accctccgag gctctgggcc gactgtcgtc cagtgtcgcc
     2341 aagctagcat atcggcgatg ccactgccgc gacgggctcc gttccggcga tccgggctcg
     2401 cttgatttcg cgggccgcag cccctaaaag cagccgcgct tgaagcactg ctttgccggt
     2461 ctcgtcccca tcgtctagag gcccaggaca ccgccctttc acggcggcga cgcgggttcg
     2521 aatcccgctg gggacgccag cagcctgggc cgcggcaccg gccgtcaacg atgcaagctg
     2581 ggatgcaagc tggcagagat cgcgccggcg atttgctcag gcgtgcctac caagtcgatc
     2641 gggccgttat aggcgatggc gttctccggc atgccgtgtc cggtcggatc gaccaccatg
     2701 acacggccgc cgtgatggtt tatcgccgcc agcccgcgcg agccatcgtc cgacaggccg
     2761 gacaggacga cgccgatcgc tttcgtccca gcgtgacgtg cgaccgattc gaagagaagg
     2821 tcgatcgtgc ggttgcgatg gctgttgccg cgagcgggca cgaggccggc gagtcttttg
     2881 tccagcaggg tcaggtgctg gtcaggctcg ccgatatagc aggttgccgc ctcgagcccg
     2941 gcgaagtcgg cggcgatgac gaccggcagc gccgtcgctt gggccagcag ctctctcaaa
     3001 tggctgatcc ggtcgaccgg tcggtggagg accaccagca ccgccgccgc gatatcccgt
     3061 gggagagacc caagcaggcg ccgcagatcg cctattccgg cggcgccgga ggcaccaatc
     3121 gcgacgaccg ggagcggggc agccatggcg ctgtctacgc caatagcgct acggccgcca
     3181 tcgccgcgcg cacgtcgaat gttcaaattg tgatgacgcc ctgaaagcgt tgcggagccc
     3241 aaagaaatcg agaggatgcg gattggcaag aaggctgttc gcacctgcaa agcctaaggc
     3301 ttgtgcggcc tggagcgtca atggcttgga agacgccacg tctgatggct gaacaccaca
     3361 atgctcccac tgccggagaa cagccggctg ccgcgcaacc gcggctgctg atcgtcgagg
     3421 atgagttgat ggtcgcttgg ggacttgtcg atacggtcca cgaactgggc tggaaggtgt
     3481 gcgcgacggt cagaacccaa gacgccgccg tcgagtcggc attgcagctg aagccggatg
     3541 ccatcttgat ggactaccgg ctgggagacg gcggagacgg gctcgccgcc gcgcgtcgaa
     3601 ttcgcgaagc tgccgacgtt cccatcatct tttgcacggc ttacgtggcc ggcttgcgtc
     3661 ccgaggtcct gtcggtggcg cgcgcgcacc tgatctccaa gcctgttcga tcgtccagcc
     3721 tgcgggaggc tctcgcctgg gcaaccgacc tcggcaagcc gacggcaaag cccggtgaag
     3781 gcgaaacgct cgtctaaata gccgaaggat cggcaaggac cgtgcggatg agcgtggaga
     3841 ggctgtcggc gtccagcctg gtcatgagac cggcgcgata gccctcgatc attcgcgggc
     3901 tgaggctgag atcgtaggcg atggtcttgt tcgacttgcc ggccaccagc ccgtccagca
     3961 cctggcgttc ccgttccgac aggaattcca ggcagcgacg aacctcggcc gagcgctgac
     4021 tgcgcgcgcg ctctccgctc cggcgggtca gcgcggcgcg aatggcctcg agaagaattt
     4081 cgttgtcgaa cggcttctcg aaaaaattga aggcccccgc cttcatggcc tcgaccgcca
     4141 gggcaacgtc ggcgtgaccg gtcatcagga tgacgggagt gtcgtcgtgg tctgccagca
     4201 gtttgcgccg gagttccagt ccatccattc cgggcatgcg gatgtcggtc acgatgcagc
     4261 ccgcttgcgc cctcggcctg gcgttcagga acgccaccgc cgactcgtgc acctgcacgg
     4321 caaggcccgc cggctgcaat gcgcgcggcc cgtgcggctg gggcctgtct cgccggaggt
     4381 ggcaattagg aatggcaatc attcgcattc gcggctaggt tttggcctgt gatgcaggca
     4441 gcaatggaaa ggatgtcctt cgatgaagca attcgctctc gcaatcgtgc tcagcgcggc
     4501 catggcggtc ccggcgacgg cctgggccaa ggccgcctgc aaggccaatc cgaaagccga
     4561 atggatgagc gaaaccgacg ccaaggcgaa gctcgaagcg cagggctaca agatcgccaa
     4621 gttcaagatc gacggcaatt gctacgagat ctacggcacc aacaaggacg gcaagaaggt
     4681 cgaaatctac ttcgatacca ggtcgctcga tgtcgtgaag gccgaaatcg aaaagtaggc
     4741 gcatgacgcc gcggcggcgc attcgggtgt gggacgtcgt cgtgcggctg ctgcactggg
     4801 cgttggcggt gctggttgcc gtcgatctgt tgcgcgacga cggcgaccgt gcccaccgcc
     4861 tggtgggcta cgccgccgtc gtcgtcgtgc tgttgcggct cggctgggcg gccgtcgtcc
     4921 gctcgcatgg cagcctggcc ggccttcgcc cgtcggtttc gcagtcgtgg gtttacctgc
     4981 gtctggtcct gcgcggacaa ccgccgcggt cgctcggcca caatccgctc ggcctctgga
     5041 tggtctggct gctgtggatc ctggtgctgc tgctcggcgt caccggctgg atgagtcggc
     5101 tcgacgcctt ttggggtgac gatcgcgtcc atgatgccca cgcgctgctg gccgatatga
     5161 tgctgatcgc cgtgatcctg catcttgccg gcgtcgccat gatgagttgg ctgtggcggg
     5221 agaacctgcc cgcgtccatg atcaccggct acaagcggcc gctgcgataa actcgccgca
     5281 cccccaaata gcacttgatc tgaggcttgg catggctttt gcttaaagcc ccgtacgggg
     5341 aggtctagcg accttcaggg ggtggtaaat gcgtatcggt ccaag
//
LOCUS       DASWGA010000740         2360 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_974455, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000740 DASWGA010000000
VERSION     DASWGA010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974455"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VF991_17305"
     CDS             <1..228
                     /locus_tag="VF991_17305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidase"
                     /protein_id="HEX9558256.1"
                     /translation="ISLDGGASWLPTMLGRDEGKYSFRQWQTEFVPTAGAMSIMVRCA
                     NSDGLVQPATLNWNPGGFMHNAIETVDVTAT"
     gene            236..637
                     /locus_tag="VF991_17310"
     CDS             236..637
                     /locus_tag="VF991_17310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX9558257.1"
                     /translation="MNLSFGPVGFGAACLAGLVLAFIGHPDSSGPPIPTPVASAPVST
                     SAPQTFVLKSVSVDLPTSTIAFPGGTKAEAINANCLACHSAGMVLTQHSLSKATWAGV
                     VDKMIHAYKAPIAEKDVASILEYLQETKGEK"
     gene            complement(1174..>2360)
                     /locus_tag="VF991_17315"
     CDS             complement(1174..>2360)
                     /locus_tag="VF991_17315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEX9558258.1"
                     /translation="AAPFFIDTTGLDFSTKPPTRDPTNPNYPRATELPDGTLPPAGVE
                     GNFIIGPSHPPAPETMAKDGVPRGTTTSFAMSSKDSVIYNPGLIRDDTAGCSNSSIMS
                     TTTAPADKSNMIVTTSHPGTWTRTIDVYVPANYVRNTEVPFIVLGDGGSTAYKDLAAI
                     LDNLIQQRRIPPMIAIQIGNGGQDAQGSERGREYDTVSGSYTQFVEREVLPLVEQKTG
                     AKLTKNPDGRATMGLSSSGAAAFTMAWFHPELYRRVLAYSPTMVNQQWPYDPSLRGGA
                     WEYHSPWAGPAGPNLNIKSGVISPSEPPGSPLIPSAPTKPIRFWFAMGDQDLFYPNPV
                     MADGMHDWVLSAERMAKVLADKGYHYQFLFARNSKHVDRPTVAQTLPAALEWLWKGHP
                     IP"
BASE COUNT          395 a          715 c          801 g          449 t
ORIGIN      
        1 atctcgctcg acggcggagc gagctggttg ccgacgatgc tcggccgcga cgagggcaag
       61 tacagcttcc gccaatggca aacggagttc gtccccacgg cgggcgccat gtccattatg
      121 gtccgctgcg ccaatagcga cggtctcgtc cagccggcga cgctgaactg gaacccaggc
      181 ggcttcatgc acaacgccat cgagaccgtc gacgtgacgg cgacatgagg gacacatgaa
      241 cctctctttc ggcccggtcg ggttcggcgc cgcctgcctg gcgggcctgg tgctggcgtt
      301 catcggccat cccgattcgt cgggaccacc gatccccact ccggtcgcat cggcaccggt
      361 ctcgaccagc gcgccgcaga cgttcgtgct gaaatcggta tcggtcgacc tgccgaccag
      421 caccatcgct ttccccggcg ggacgaaggc cgaggcgatc aacgccaact gcctcgcctg
      481 tcactccgcc ggcatggtgc ttacccagca cagcctctcc aaggcgacgt gggcgggcgt
      541 ggtcgacaag atgatccacg cctacaaggc gccgatcgct gagaaggatg tggcgtcgat
      601 cctcgagtat ctgcaggaaa caaaggggga gaagtaaacc ggggttgtgt gtactggccg
      661 ccagccagag attagcccgt aaccggacat acggcggacc tgccgtcact tctgctcttg
      721 accgaggctg tgtgaaaagg ttggaagccg ttgttggggc gcaacgatag aatcggaggc
      781 gtagtctcag taaatatttg atgcgcgtgc ggcgggcggt ttgaatcaat tttgcgcccc
      841 gatgatccgc agaatgcttt tcacacagcc tcgacccaga tcggacatgc gcctcgtggc
      901 acacgctcgc cgcttctgtg cgcaagctgg catatgtcgg caaataacag gtgcccaaat
      961 gcggattccg tgggtcgagg tgacgagcaa aaccgccagg ctggacgaga tggggccatc
     1021 gctgtcgcgg ccggcgtagg acttcgccgt tgttgccagt ccagcggatc gcttactcga
     1081 tcgtccggtc cgcgcgctcg atcatcgcat cggcaatctt gcggccgatg gccttggcgg
     1141 tgcccagact tttcccccac ccgaggcgtg tcgctatgga atcggatggc ccttccatag
     1201 ccattcgagc gccgccggta aggtttgggc gacagtcggc cggtcgacat gcttggagtt
     1261 gcgcgcgaac aggaactggt agtggtagcc cttgtcggcc agcaccttgg ccatgcgctc
     1321 ggccgagagg acccagtcgt gcatgccgtc ggccatgacg gggttgggat agaagagatc
     1381 ctggtcgccc attgcgaacc agaagcggat cggcttcgtg ggcgcgctcg ggatcagcgg
     1441 cgagccgggt ggctcggagg gtgagatcac gcccgacttg atgttgagat tggggccggc
     1501 gggtccggcc catgggctgt gatattccca ggcgccgccg cgcagtgacg ggtcgtaggg
     1561 ccattgctgg ttcaccatgg tcggcgaata ggccagcacc ctgcgataga gctcgggatg
     1621 gaaccacgcc atggtgaagg ccgcggcgcc gctcgagctc aggcccatgg tggcgcggcc
     1681 gtcagggttc ttcgtgagtt tcgcgccggt tttctgctcg accaggggca gcacttcgcg
     1741 ctcgacgaac tgcgtatagc tgcccgacac ggtgtcgtat tcgcgcccgc gctcgctgcc
     1801 ttgcgcatcc tggccgccat tgccgatctg gatggcgatc atcggcggga tccggcgctg
     1861 ctggatcaga ttgtcgagaa tggcggccag gtccttgtag gcggtcgagc cgccatcgcc
     1921 cagcacgatg aacggcacct cggtgttgcg cacgtagttg gcagggacat agacgtctat
     1981 cgtgcgcgtc caggtgccgg gatggctggt ggtgacgatc atattcgact tgtcggccgg
     2041 cgccgtcgtc gtcgacatga tcgagctgtt ggagcagccc gctgtgtcgt cgcggatcag
     2101 gccgggattg tagatcacgc tgtccttcga cgacatcgcg aacgaggtcg tcgtgccgcg
     2161 cggcacgcca tccttcgcca tggtctcggg tgcgggcgga tggctcggcc cgatgatgaa
     2221 gttgccctcg acgcctgccg gcggcagcgt gccgtcgggc aactccgtgg cgcgtggata
     2281 gttcgggttc gtgggatcgc gcgtcggcgg cttggtgctg aagtcgaggc ccgtcgtgtc
     2341 gatgaagaag ggcgccgcat
//
LOCUS       DASWGA010000741         1730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_456204, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000741 DASWGA010000000
VERSION     DASWGA010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456204"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VF991_17320"
     CDS             complement(<1..383)
                     /locus_tag="VF991_17320"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HEX9558259.1"
                     /translation="MPQTHKLALLDDYQKVAMRMADWDRLKKRGVEITVFHEPFASVE
                     DAAGKLAPFDMLGLLRERTAFPRALIDKLPNLKFMVLTGARASSLDDKAATERGIPIS
                     NTPGGGSNASTAELCWALLMSCARDL"
     gene            438..1322
                     /locus_tag="VF991_17325"
     CDS             438..1322
                     /locus_tag="VF991_17325"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9558260.1"
                     /translation="MSITVKPVTPDFGAEISGIDLARPLGPADRDAIEDAINRYAVVV
                     FRGQTLNDEQQITFARHFGPIHSSAQRARHHDIKHRLAAHEIADISNLDGDGHVMPAD
                     HRRRLDGLGNRLWHTDASFRAVPGALSMLYAHIVPDEGGDTEFADLRAAYNALPDKTK
                     AAIEGLIAEHSIWHSRGQLAVTKYAPEELASLPPVPQRVVRRHPGSRRKTLYLASHAS
                     HIIGLPIADGRLLLMDLIEHATQPRFVHAHTWQQGDLVIWDNRCTMHRARPFDTTKVR
                     DLRRVTTRDVASTLEQAA"
     gene            1332..>1730
                     /locus_tag="VF991_17330"
     CDS             1332..>1730
                     /locus_tag="VF991_17330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEX9558261.1"
                     /translation="MPRPVDIWLASGVRTPFAKVDGALAAFDAIELSVPVARHMVAEL
                     KGGRPDFAVWGVVVPSLTFSNIGREVLMDAGIDATVPAFSTVMACSTSMIGAIEAAGM
                     IDGTSRNLALVGGVDSLTRIQVGLGEPLSVW"
BASE COUNT          283 a          611 c          565 g          271 t
ORIGIN      
        1 aggtcgcggg cgcaggacat caggagcgcc cagcaaagct cggcggtcga ggcgttggag
       61 ccaccgcccg gcgtgttgga gatcggaatg ccgcgctcgg tcgccgcctt gtcgtcgagg
      121 ctgctggcac gcgcgccggt cagcaccatg aacttgaggt tgggcagctt gtcgatcagc
      181 gcccgtggaa aggccgtgcg ctcgcgcagc aggcccagca tgtcgaacgg cgccagcttc
      241 ccggcggcgt cctcgaccga ggcgaacggc tcgtggaaga ccgtgatctc cacgccgcgc
      301 ttcttcagcc ggtcccaatc ggccatgcgc atggctacct tctggtaatc gtcgagcagg
      361 gcgagcttgt gggtttgcgg catggcgttt cctgggtgag aatagttggc ctgacactat
      421 agccgcagga gacggttatg agcatcaccg tcaagccggt gacgcctgac ttcggggccg
      481 agatttcggg catcgacctc gcccggccgc tcggccccgc cgaccgcgac gcgatcgagg
      541 atgccatcaa ccgctacgcc gtcgtggtgt tccgtggcca gaccctaaac gacgagcagc
      601 aaatcacctt cgcccggcat ttcgggccga tccattcgtc ggcccagagg gcccggcatc
      661 acgacatcaa gcatcgcctg gccgcccacg agatcgccga tatctccaat ctcgacggcg
      721 acggccacgt gatgccagcc gaccaccgcc gccgcctcga cgggctgggc aaccggctgt
      781 ggcacaccga cgcctcgttc cgcgccgtgc cgggggcgct gtccatgctc tacgcccata
      841 tcgtgcccga cgagggcggc gacaccgaat tcgccgacct gcgggcggcc tacaacgcgc
      901 taccagacaa gaccaaggcc gcgatcgaag gcctgatcgc cgagcactcg atctggcatt
      961 cgcgtggcca gctcgcggtc accaagtacg cgcccgagga gctcgccagc ctgccgccgg
     1021 tgccgcagcg cgtcgtgcgc cgccatcccg gttcgcgacg caagacgctc tacctcgcca
     1081 gccacgcctc gcacatcatc ggcctgccga tcgccgacgg ccggctcctg ctgatggacc
     1141 tgatcgagca cgccacgcag ccccggttcg tgcatgccca cacctggcag cagggcgacc
     1201 tggtgatctg ggacaatcgc tgcaccatgc atcgcgcgcg gccgttcgac accaccaagg
     1261 tgcgcgacct caggcgcgtg accacgcgcg acgtggcctc gaccctcgaa caggcggcct
     1321 aggagaagac gatgccgcgg cctgtcgaca tctggctggc cagcggcgtg cgcacgcctt
     1381 tcgccaaggt cgacggcgca ctggcggcgt tcgacgccat cgagctttcc gtgccggtgg
     1441 cgcgccacat ggtggccgag ctcaagggcg gcaggcccga ctttgcggtg tggggcgtcg
     1501 tggtgccgag cctcactttc agcaacatcg gccgcgaggt gctgatggat gccggcatcg
     1561 acgccacggt gcccgccttc tccaccgtca tggcctgctc gaccagtatg atcggggcga
     1621 tcgaagccgc cggaatgatc gacggaacga gccgcaacct cgcgctggtc ggcggcgtcg
     1681 acagcctgac ccgcattcaa gtcgggctgg gcgagcctct ttcagtctgg
//
LOCUS       DASWGA010000742         3069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2226086, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000742 DASWGA010000000
VERSION     DASWGA010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2226086"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VF991_17335"
     CDS             complement(<1..399)
                     /locus_tag="VF991_17335"
                     /inference="COORDINATES: protein motif:HMM:NF012795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HEX9558262.1"
                     /translation="MARTRRIGEFPLIARYFAPLARGFAGAGNLESDNAFLAADPKHD
                     LVVKTDTVVSGVHFLADEKPGLVAAKALRVCLSDLAAGGATPFTYQLSLSLSKGWTEN
                     WVAGFARGLAADQRRYGILLCGGDTVVSPGP"
     gene            complement(407..886)
                     /gene="nusB"
                     /locus_tag="VF991_17340"
     CDS             complement(407..886)
                     /gene="nusB"
                     /locus_tag="VF991_17340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEX9558263.1"
                     /translation="MSEQSTPSPTPSRRQAARLAAVQALYQWQEGEHAPAEIIEQFLS
                     VRTGETGEGGMRRDADRPLFKDVVEGTVAHKDTLEQTVSAALAEGWTWPRVDRLVRAI
                     LLAGAYELLHRSDVPPRVAINEYVEIAHAFYDQGEPNFINSVLDRVARQARSAELVR"
     gene            complement(883..1359)
                     /locus_tag="VF991_17345"
     CDS             complement(883..1359)
                     /locus_tag="VF991_17345"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007564213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEX9558264.1"
                     /translation="MSTRTETSTARPAVAGVKGARILIVESRYYVDIADALIAGAERE
                     IKKAGALSERVVVPGAFEIPGAIALAAEHYDGFIALGCVIRGETTHYDYICGESARGL
                     MDLAVHEKLAIGYGILTVDSIEQAEARALTDRGDKGGDAAHACLAMVALRRRWRNG"
     gene            complement(1371..2528)
                     /gene="ribB"
                     /locus_tag="VF991_17350"
     CDS             complement(1371..2528)
                     /gene="ribB"
                     /locus_tag="VF991_17350"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEX9558265.1"
                     /translation="MSALEKDAWRITFSEVKAAAEDIIEEARKGRMFILVDDEDRENE
                     GDLVIPAQCATPEAINFMAKHARGLICLALTRERVEQLGLALMAQNNGTRHQTAFTVS
                     IEAREGVTTGISAADRARTVAVAIDPSCGPQDIVTPGHVFPLVARDGGTLERTGHTEA
                     AVDLARLAGLTPAGVVCEIMNDDGTMARRNDLITFAQRHGLKIGTIADLIAYRRRYDS
                     IVKRLSETTFESIYGGDFRCVIYVNKVTMAQHIALVKGDPARGGPVTVRMHAVNIFTD
                     ALGQRNTGRGGEIEASMREIAKEGRGVIVLIREPLTVMLAEQRRRAGEPIEPSGGELR
                     DYGVGAQILIDLGVKEMVLLSNSIKSVVGLEGFGLKIVGQKPVPGRPSRRP"
     gene            complement(2525..>3069)
                     /locus_tag="VF991_17355"
     CDS             complement(2525..>3069)
                     /locus_tag="VF991_17355"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEX9558266.1"
                     /translation="AGDRRFVVRTRHDMAPIAIGASIACSGCCLTVLEKGGDWFAVEV
                     SGESLAKTHLGDWKLGSRVNLELSLKLGDELGGHLVYGHVDGVGTIASMTPEGGSVRF
                     MFEVPSELGRFIAAKGSVAVDGISLTVNEVDAKRFGVNVISHTQAVTTLGQAKVGQRV
                     NLEVDMLARYVQRLLEHQRS"
BASE COUNT          467 a         1052 c         1047 g          503 t
ORIGIN      
        1 cggccccggc gagaccacgg tgtcgccacc gcagagcagg atgccgtagc gacgctggtc
       61 ggccgccaga ccgcgcgcga agcccgcgac ccagttttcc gtccagccct tcgacagcga
      121 caacgagagt tgataggtga acggcgtggc gccgccggcc gcgagatcgg agaggcagac
      181 gcgcaacgcc ttggcggcga ccaaccccgg cttctcgtcg gcgagaaaat ggacgcccga
      241 cacgaccgtg tcggtcttca ccacgaggtc gtgtttcgga tcggcggcga ggaaggcgtt
      301 gtcgctctcg agattgccgg cgccggcgaa gccgcgggcc aatggcgcga agtagcgggc
      361 tatcagcggg aactcgccga tacgcctcgt gcgcgccatc ggccggctac ctcacgagct
      421 cggcggaccg cgcctggcgc gccactcgat cgagcaccga attgatgaag ttgggctcgc
      481 cctggtcgta gaaggcgtgg gcgatttcga catattcgtt gatcgccacc cggggcggca
      541 cgtcgctgcg atgcagcagt tcgtaggcgc cggccagcag gatcgcccgc accagccgat
      601 cgacgcgcgg ccaggtccag ccctcggcca gggcggccga cacggtctgc tcgagcgtat
      661 ccttgtgggc gacggtgccc tcgacgacgt ccttgaacag cgggcgatcg gcgtcgcggc
      721 gcatgccgcc ctcgcccgtc tcgccggtgc gcacgctcag gaactgctcg atgatctcgg
      781 ccggagcgtg ctcgccctcc tgccattgat agagcgcctg cacggccgcc agccgcgcgg
      841 cctggcgacg gcttggcgtg gggctgggcg tcgactgctc gctcatccgt tccgccagcg
      901 gcggcggaga gccaccatgg cgaggcaggc atgggccgca tcgccgccct tgtcgccgcg
      961 gtcggtcagc gcgcgcgcct cggcctgctc gatgctgtcg acggtgagga tgccgtaacc
     1021 gatcgctagc ttctcgtgga ccgccaggtc catcagcccg cgcgcgctct cgccgcagat
     1081 atagtcgtag tgcgtggtct cgccgcggat gacgcagccc agcgcgatga agccgtcgta
     1141 atgctcggcc gccagggcga tggcgccagg gatctcgaag gcgcccggca cgacgacacg
     1201 ctccgacagc gcgccggctt tcttgatctc gcgctcggcg ccggcgatca gcgcgtcggc
     1261 gatgtcgacg tagtagcgcg attccacgat caggatgcgc gcgcccttga ccccggccac
     1321 cgccgggcgg gccgtcgagg tttccgtccg tgtcgacatg gctaacgcat ctatggacgg
     1381 cgagaggggc ggcccgggac cggcttctgg ccgacgattt tcaggccgaa gccttccagg
     1441 ccgaccacgc tcttgatgct gttgctcagc aggaccattt ccttgacccc gaggtcgatc
     1501 aggatctgag cgccgacgcc gtagtcgcgc agctcgccgc ccgagggctc gatcggctcg
     1561 ccggcgcgcc ggcgctgctc ggccagcatc acggtgagcg gctcgcggat cagcacgatg
     1621 acgcccctgc cctccttggc gatctcgcgc atcgacgcct cgatctcgcc gccgcggccg
     1681 gtgttacgct ggccgagcgc gtcggtgaag atgttgaccg cgtgcatgcg caccgtgacc
     1741 gggccgcccc tcgccggatc gcccttcacc agggcgatgt gctgggccat cgtcaccttg
     1801 ttgacgtaga tgacgcagcg gaagtcgccg ccgtagatgc tctcgaaggt ggtctcgctc
     1861 aaccgcttga cgatcgaatc gtagcgccgg cgataggcga tcaggtcggc gatggtgccg
     1921 atcttcaggc catggcgctg ggcgaaggtg atgaggtcgt tgcgacgggc catcgtgccg
     1981 tcgtcgttca tgatctcgca gaccacgccg gccggcgtga ggcccgccag gcgcgccagg
     2041 tcgaccgcgg cctcggtatg gccggtgcgc tcgagcgtgc cgccgtcgcg cgccaccagc
     2101 ggaaagacat gacccggcgt gacgatgtcc tgcggcccac acgacggatc gatcgccacc
     2161 gccacggtgc gcgcccggtc ggccgccgag atgccggtgg tgacgccttc gcgcgcctcg
     2221 atcgacacgg tgaaggcggt ctggtggcgg gtgccgttgt tctgcgccat cagcgccagg
     2281 ccgagctgct cgacccgctc gcgggtcagg gcaaggcaga tcaggccgcg cgcgtgcttg
     2341 gccatgaagt tgatggcttc gggtgtggcg cattgcgccg ggataacgag gtcgccttcg
     2401 ttctcgcggt cctcgtcatc gaccaggatg aacatgcggc ccttgcgggc ctcctcgatg
     2461 atgtcctcgg ccgcggcctt cacctccgag aaggtgatcc gccaggcgtc cttttcgagc
     2521 gcgctcatga tctttggtgc tccaacaatc gctgaacgta acgcgcgagc atatcgacct
     2581 caaggttgac gcgctggcca actttggcct gtcccagggt ggtaaccgcc tgggtatgtg
     2641 aaatcacgtt gacgccgaag cgcttggcgt cgacctcgtt caccgtgagt gagatgccgt
     2701 cgaccgcgac cgaacccttg gcggcgatga agcgccccag ctcggacggg acctcgaaca
     2761 tgaagcgcac gctgccgcct tcgggcgtca tcgacgcgat cgtgcccacg ccgtcgacat
     2821 ggccatagac cagatggccg cccagctcgt cgcccagctt caacgacagt tcgagattga
     2881 cgcggctgcc cagtttccag tcaccgagat gggtcttggc caggctctcg cccgagacct
     2941 cgacggcgaa ccagtcgccg cccttttcga gcacggtgag gcagcagccc gagcaggcga
     3001 tcgaggcgcc aatggcgatc ggcgccatgt cgtgccgggt gcggacgaca aagcggcgat
     3061 cgcccgcct
//
LOCUS       DASWGA010000743         1905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_974987, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000743 DASWGA010000000
VERSION     DASWGA010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974987"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="VF991_17360"
     CDS             complement(<1..341)
                     /locus_tag="VF991_17360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl dehydratase"
                     /protein_id="HEX9558267.1"
                     /translation="MKQLGEGWNWRELKIGDRFITYGRTLFEADLLNFVTLCGFSEEL
                     FTNKEYIQSHAPMRGGHPVPGALVYSMAEGLVIPTTLQGSGLAFLSMGFDIKGPTYVG
                     DTIHVEIEVSE"
     gene            complement(352..549)
                     /locus_tag="VF991_17365"
     CDS             complement(352..549)
                     /locus_tag="VF991_17365"
                     /inference="COORDINATES: protein motif:HMM:NF021772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEX9558268.1"
                     /translation="MTEPFEIITVDTDRVACDGGGGALGHPKVYLNLGKEGRVECPYC
                     SRLYVLREGAPGGTGAAAHAH"
     gene            575..1567
                     /locus_tag="VF991_17370"
     CDS             575..1567
                     /locus_tag="VF991_17370"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9558269.1"
                     /translation="MIAVAFLPVMLSACAPTVVPAGGAVRTPTLTADRYVAADGTSLP
                     VAEWPAANGPPKAVILGLHGFGDYRKAWEEPAEIWAKAGITTYSYDQRGFGASPTRGR
                     WPGTQALVGDAKAMAALLRTQYPGAPLYLAGESMGGAVALVAADEGAEVDGLILAATA
                     LRSRDTFGPIANAGLWFFAHTIPWMPNGPTSIDFQPTDNPKTLEKLRNDKMMLRGARL
                     DMGYGLVDLMDDARAAAPHVRLPYLMLHGLGDRIIPQEPVRAAIEVMPPRADSRLAFY
                     KNGYHLLLRDKEGKLVATDVVSWIGDHEAALPSGADASRSQPEIAALWGSKRSR"
     gene            complement(1572..>1905)
                     /locus_tag="VF991_17375"
     CDS             complement(1572..>1905)
                     /locus_tag="VF991_17375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558270.1"
                     /translation="ATSRRGSSMMARSTIRWTFVLGIASLAVACADAKSTPGTDPDTR
                     TTATMVTWSDGKPAISINCDMPGGCQSRALAMCKGGNYAVLKMDNMPTRGDASVVRGP
                     GSVVVRCS"
BASE COUNT          320 a          648 c          621 g          316 t
ORIGIN      
        1 atctcgctca cctcgatttc gacatgaatc gtgtcgccga cataggtcgg acccttgatg
       61 tcgaagccca tcgacaggaa ggccagaccc gacccctgca gggtggtcgg gatcaccagc
      121 ccttcggcca tggaatagac cagggcgccc ggcaccggat ggccgccgcg catgggggca
      181 tggctttgga tgtattcctt gttggtgaac aactcctcgg aaaagccgca aagagttacg
      241 aaattgagga ggtcggcctc gaagagcgtg cggccgtagg tgatgaagcg gtcgccgatc
      301 ttcagctcgc gccagttcca gccctcgccg agctgtttca cggccgctgt ctcagtgagc
      361 atgcgcggcg gcgccagtcc cacccggggc gccttcgcgg aggacgtaaa gccggctgca
      421 atagggacat tcgacacgcc cctctttgcc caggttgaga tagactttag ggtgtcccaa
      481 ggcgccgcca ccgccatcgc aggcgacgcg gtcggtatcg acggtaatga tctcaaaagg
      541 ctcggtcacg atctctctcc tcacgcgccg gctcatgata gccgtcgctt tcctgccggt
      601 catgctttcc gcctgcgccc ccacggtcgt tccggcaggc ggcgcggtgc gcacgcccac
      661 gctcacggcc gaccgttatg tcgcagccga cggcacttcg ctaccggtcg ccgagtggcc
      721 cgcggcaaac ggcccgccca aggcggtgat cctgggcctg cacggcttcg gcgactaccg
      781 caaagcctgg gaggagccgg cggagatctg ggccaaggcc ggcatcacca cctattccta
      841 tgaccagcgc ggctttggtg ccagcccgac gcgcggccgc tggcccggca cgcaagccct
      901 ggtcggcgac gccaaggcca tggcggccct gctgcgcacg caatatcccg gcgcgccgct
      961 ctacctggcc ggcgagagca tggggggcgc ggtggccctg gtcgccgccg acgagggcgc
     1021 cgaggtcgac ggcctgatcc tggccgccac ggcgctgcgc tcgcgcgaca cgttcgggcc
     1081 gatcgccaac gccggcctgt ggttcttcgc ccacaccatt ccgtggatgc ccaacggccc
     1141 gacctcgatc gatttccagc cgactgacaa ccccaagact ttggagaagc tcaggaacga
     1201 caagatgatg ctgcgcggcg cgcggctcga catgggatat gggctggtcg acctgatgga
     1261 cgatgcgcgc gcggctgccc cgcacgtgcg cctaccctat ctgatgctgc acggactggg
     1321 cgatcgcatc ataccgcagg aaccggtgcg cgcagcgatc gaggtgatgc cgcctcgcgc
     1381 cgattccagg ctggcctttt acaagaacgg ctatcacctg ttgctgcgcg acaaggaggg
     1441 caagctcgtg gcgaccgatg tcgtgtcctg gatcggcgac cacgaagcgg cgctgccgtc
     1501 gggcgccgac gcctcgcgct cgcaacccga gatcgccgcc ctttggggct ccaagcgcag
     1561 ccgctagacc actagctgca acgcacgacg acggaaccgg ggccacgcac cacggaggca
     1621 tcgccgcggg tcggcatgtt gtccatcttg agcacggcgt agttgccgcc cttgcacatg
     1681 gcgagagcgc ggctctggca gcctccgggc atgtcgcaat tgatggaaat ggcgggcttg
     1741 ccgtccgacc aagtgaccat ggtggcggtc gtgcgcgtgt cgggatcggt gcccggcgtg
     1801 cttttggcat ccgcgcaagc gaccgcaagg cttgcgatgc caagcacgaa tgtccagcga
     1861 atcgtcgatc gcgccatcat gctgctcccc cgtcgtgacg tcgcg
//
LOCUS       DASWGA010000744         6937 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_975099, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000744 DASWGA010000000
VERSION     DASWGA010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6937
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_975099"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            39..983
                     /locus_tag="VF991_17380"
     CDS             39..983
                     /locus_tag="VF991_17380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558271.1"
                     /translation="MRRRLIQAVPLMLGVVVINFCLIQLAPGSFLELMTAENQVSDPA
                     TVALLRKTYGLEDPVWLQLLKYIWALAHFDFGFSYRQNMPVIDAIWINLPATLLLMVS
                     SITLALVVGVAAGVVASVKVRTFWDSLVSVAAMFFFAAPSFWLGIMLIVLFSVKLGWL
                     PVGGMATIGGGGGVLDILHHLLLPTLALGLFYAAIYARVMRSSMLEVAQLDFVRTARA
                     KGLSRNKVTIAHVLRNALLPVVTILGVQMGTVLAGSVVIESVFSWPGIGSLLFDSVSS
                     RNYPVVLGIMVLGSLVVIAANIAVDLVYMWLDPRIEIR"
     gene            983..1837
                     /locus_tag="VF991_17385"
     CDS             983..1837
                     /locus_tag="VF991_17385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012092753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558272.1"
                     /translation="MARFEIPRLEFVGRFARNRGALLGACLILVVALAAVLAPLFFPA
                     DPLRIVGMPELWPGEDPAFPLGTDSLGRDILAMIVHGARATLLIGLFASAVATLIGVT
                     VGAIAGYFGGWVDEVAMRAAELFQTIPNLIFVLTIVVILGSTLTNIVIAIGIVSWTSI
                     ARMTRAEFLALRDREFVQACRAMGMGNGRIIVGEILPNALPPVIVLSSLVVAGAILFE
                     SAVSFLGLGDPNLASWGRLVGDGRQLIRSSWYICAIPGVAIMVTVLCLNLIGDGLNDA
                     LNPKLRDR"
     gene            1959..2933
                     /locus_tag="VF991_17390"
     CDS             1959..2933
                     /locus_tag="VF991_17390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558273.1"
                     /translation="MVLPLEVQNLSTTLFTRRGEMKAVDGLSLSVGAGETVALVGESG
                     CGKSLSALSIMRLLPDPPARIVAGAVKLNGRDIVAVPEETMLDIRGKEIGMIFQDPMS
                     SLNPVATVEKQIAEVLTAHTDLGRSQARARAHELLELVGMPDAARRLDAYPHQLSGGM
                     CQRVMIAMAIACSPSVLIADEPTTALDVTVQAQVLALLKRLQADAGMAMIFITHDLGV
                     VAETADRVVVMYAGRKVEEAPVDDLFENPRHPYTAGLIGATPVPGAARAERLADIPGM
                     VPPLNALPQGCAFAPRCPRVMERCRRERPKLTQPAPGRLVACFAAEKG"
     gene            2938..3879
                     /locus_tag="VF991_17395"
     CDS             2938..3879
                     /locus_tag="VF991_17395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9558274.1"
                     /translation="MALLSLSDVHVRFNTAAGVVRAVNGVSLELAVGETLGLVGESGC
                     GKSTLGKAILKLVPIAGGEIVVDGVDIAPLERERLAEMRRKVQMIFQDPYGSLNPRST
                     VGRSVAQPLVIAGWKQDATAERVDTLLRWVGLPADAKQRYPHEFSGGQRQRIGIARAL
                     ALNPKLIICDEPVSALDVSVRAQVINLLEDLKGQFGVSYLFISHDLSVVEHIADRVAV
                     MYLGTLVEVASRDQIWRNPQHPYTKALLAAAPIADPKAARARQRMVLQGELPSAIDPP
                     AGCPFHSRCPIAQERCKADKPVLRPVGGGTLAACHFV"
     gene            3899..4453
                     /locus_tag="VF991_17400"
     CDS             3899..4453
                     /locus_tag="VF991_17400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558275.1"
                     /translation="MQMRLAAVLMAALLSSTVASAQTMEFACPDPGTTFTYDSGTKVV
                     ARGRDGMDCTMEIVGGKPYKLRALLIDNPSPDGASTSAFIAALRPERLWPLQVGKKIE
                     ADYSADGRSWHYIVTVARHEKRSGPRDALIDTFLIEMNEQGDKGQRALSRWWISPADK
                     YAIRFDYSDGSGHANRAIVTEVKR"
     gene            complement(4475..5593)
                     /locus_tag="VF991_17405"
     CDS             complement(4475..5593)
                     /locus_tag="VF991_17405"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEX9558276.1"
                     /translation="MRLAFIDNIRWTMILLVLSMHASDTYSPFGSWYYTDRSEMDFGT
                     ILAFALYQTFLQAFFMALLFFIAGYFAAPAFDRKGLARFSRDRFLRLGLPTLLYMLVV
                     GPLTQYFLSKTWGSGGFAYQWLIHLRDGEWLSETGPMWFCAFLLILSLAYALLRQTQP
                     ADRPRESDGLHDRAILAFTAGMALATFLMRIAVPETVSVLNMHPGDFPQYILMFAAGV
                     TAYRGRWLERLPQRIASRWALATLLLSLPLLALLIMLGGGLQHDTSRYNGGFNLVSAG
                     KCLWEALVCVGMSFALVGLYRRYFDRQGRPAKFLSDNAFAVYLFHPPVIIALAILFHP
                     VAAPALVKAALLTACAAVVTFALSATVFRRLPGLNRIL"
     gene            complement(5601..6524)
                     /locus_tag="VF991_17410"
     CDS             complement(5601..6524)
                     /locus_tag="VF991_17410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine dehydratase"
                     /protein_id="HEX9558277.1"
                     /translation="MIGRSDVEAAWRLIRPHVRRTPAIELSAGALGVAAPLALKLESL
                     QLSGSFKGRGAFHKLLASKVPAAGIVAASGGNHGAAAAYAARALGHKAEIFVPTIASA
                     AKVARLKDYGAVVHQVGAVYAEARAASEKRAAETGALVVPAYEDPVVFAGAGSVALEF
                     AEQAGFDTLLVAVGGGGLIAGCAAAIGESVKIVAVETEGTPTLYEARRAGRPVDVKIS
                     GIAADALGASRIGVPNFEVAQKLVRESVLVSDDAVREAQRALWEELRLIAEPAGATGL
                     AALMAGVYRPAPGERVATLICGANAEPASVA"
     gene            complement(6528..>6937)
                     /locus_tag="VF991_17415"
     CDS             complement(6528..>6937)
                     /locus_tag="VF991_17415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HEX9558278.1"
                     /translation="VLASLLHDVGHMIHQLGEDPAGRGIDDVHEERGAAWLAERFGPE
                     VSEPVRLHVAAKRYLCAVEPDYFTKLSPDSVRSLGLQGGPMSAGEIDDFRRHPLYAEA
                     VRLRRYDEAAKDPRAKTPDFDHFLRHVAACRRA"
BASE COUNT         1117 a         2362 c         2332 g         1126 t
ORIGIN      
        1 caggcaccag ctcacgccaa ctcgcggcgc taaaactcct gcggcggcgg ctgatccagg
       61 cggtgccgct gatgctgggt gtggtggtga tcaacttctg tctgatccag ctcgcccccg
      121 gcagcttcct cgagctgatg acggcggaaa accaggtgag cgacccggcc acggtcgcgc
      181 ttttacgcaa gacctatggg ctcgaggatc cggtgtggct gcagctcttg aagtacatct
      241 gggcgctggc gcatttcgat ttcggttttt cctatcgcca gaacatgccg gtgatcgatg
      301 ccatctggat caacctgccg gccaccctgc tgctgatggt gtcgagcatc acgctggccc
      361 tcgtggtcgg cgtcgcggcg ggcgtcgtgg cctcggtgaa ggtgcgcacc ttctgggaca
      421 gcctggtctc ggtagcagcg atgttcttct tcgccgcgcc cagcttctgg ctcggcatca
      481 tgctgatcgt gctgttctcg gtgaagctgg gctggctgcc ggtcggcggc atggccacca
      541 tcggcggcgg cggcggcgtt ttggacatcc tgcatcatct gctgctgccg accctggccc
      601 tcggcctgtt ctacgccgcg atctacgccc gggtcatgcg ctcctcgatg ctcgaagtgg
      661 cgcagctcga cttcgtgcgc accgcgcgcg ccaaagggct cagccgcaac aaggtgacga
      721 tcgcccacgt gctgcgcaac gcgctcttgc ccgtggtcac catcctcggc gtgcagatgg
      781 gcacggtgct ggccggcagc gtggtcatcg aaagcgtgtt cagctggccc ggcatcggct
      841 cgctcctgtt cgacagcgtg agctcgcgca actacccggt cgtcctcggc atcatggtgc
      901 tgggctcgct ggtcgtgatc gccgccaaca tcgccgtcga cctggtctat atgtggctcg
      961 acccgcgcat agaaatccgc tgatggcgcg ctttgaaatc ccccgcctgg agtttgtcgg
     1021 ccgcttcgcc cgcaaccgcg gcgccctttt aggcgcctgc ctgatcctgg tggtggcgct
     1081 ggccgccgtg ctggcgccgc tcttcttccc ggccgatccg ctgcgcatcg tcggcatgcc
     1141 cgagctgtgg ccgggcgagg atccggcctt tccgctcggc accgattcgc tgggccgcga
     1201 catcctcgcc atgatcgtgc acggcgcgcg cgccaccctg ctgatcggcc tgttcgcctc
     1261 ggccgtggcg accctgatcg gcgtcacggt cggcgccatc gccggctatt tcggcggctg
     1321 ggtcgacgag gtcgcgatgc gtgcggccga gttgttccag accattccca acctgatctt
     1381 cgtgctgacc atcgtggtga tcctgggctc gaccctgacc aacatcgtga tcgccatcgg
     1441 catcgtgagc tggacgtcga tcgcgcgcat gacccgtgcc gagttcctgg ccttgcgcga
     1501 ccgcgagttc gtgcaggcct gccgcgccat gggcatgggc aacgggcgca tcatcgtggg
     1561 cgagatcctg cccaacgccc tgccgccggt gatcgtgctg tcatcgctgg tcgtggccgg
     1621 cgccatcctg ttcgaatcgg cggtgtcgtt cctgggcctc ggcgatccca acctcgcgag
     1681 ctggggccgc ctggtcggcg acggccgcca gctcatccgc agctcctggt acatctgcgc
     1741 catccccggc gtcgccatca tggtgacggt gctctgcctc aacctgatcg gcgacgggct
     1801 gaacgatgcg ctcaatccca aacttcggga tcggtgatgc ctacttccgt cgccccgagc
     1861 ggagcgaagc gaagccgagg ggccttgccg gacgcaggca aggtctctcc gctccgcctc
     1921 gctgcgctcg gctccggtcg agacgacgga ggggcttgat ggttcttcct ctggaggtgc
     1981 agaacctcag caccacgctc ttcacccgcc gcggcgagat gaaggcggtc gatggtcttt
     2041 cgctgtccgt cggcgccggc gaaacggtgg cgctggtggg cgaatcgggt tgcggcaagt
     2101 cgctgtcggc gctctcgatc atgcggctgc tgcccgaccc gccggcccgc atcgtcgccg
     2161 gcgcggtgaa gctcaatggc cgcgacatcg tggcggtccc cgaggagacc atgctcgaca
     2221 tcaggggcaa ggagatcggc atgatcttcc aggacccgat gagctcgctc aatccggtgg
     2281 cgacggtcga gaagcagatc gccgaagtcc tgacggccca caccgacctc ggccgcagcc
     2341 aggcgcgggc ccgcgcgcac gagctgctgg agctggtcgg catgcccgac gccgcccggc
     2401 ggctcgacgc ctacccgcac cagctttcgg gcggcatgtg ccagcgggtg atgatcgcca
     2461 tggcgatcgc ctgcagcccc tcggtgctga tcgccgacga gccgaccacc gccctcgatg
     2521 tcacggtgca ggcccaggtg ctcgccctgc tgaagcgcct gcaggccgac gccggcatgg
     2581 ccatgatctt catcactcac gatctcggcg tggtggccga gaccgccgac cgcgtggtgg
     2641 tgatgtatgc cggccgcaag gtcgaagaag cgccggtcga cgatttgttc gaaaacccgc
     2701 ggcatcccta cacggcgggc ctgatcggcg cgacgccggt ccccggtgcc gcgcgcgccg
     2761 agcggctggc cgacattccc ggcatggtgc cgccgctcaa cgccctgccg cagggctgcg
     2821 ccttcgcgcc acgctgcccg cgcgtgatgg agcgctgccg acgcgaaagg cccaagctca
     2881 cgcagccggc gccgggccgc ctggtcgcct gcttcgccgc cgagaagggc taaagcgatg
     2941 gcgctgctct cgctcagcga cgtccatgtc cgtttcaaca ccgcggccgg tgtcgtgcgc
     3001 gctgtgaacg gcgtcagcct cgagctggca gtcggcgaaa cgctggggct ggtgggcgaa
     3061 tcgggctgcg gcaagtccac cctcggcaag gcgatcctga agctggtgcc gatcgcgggc
     3121 ggcgagatcg tggtcgacgg cgtcgacatc gccccgctcg agcgcgagcg gctcgccgag
     3181 atgcgccgca aggtgcagat gatcttccag gatccctacg gctcgctcaa tccgcgttcg
     3241 accgtgggcc gctccgtcgc ccagccgctg gtcatcgccg gctggaagca agacgccacg
     3301 gccgagcggg tcgatacctt gctgcgctgg gtcggcctgc cggccgacgc caagcagcgc
     3361 tatccgcacg aattctccgg cggccagcgc cagcgcatcg gcatcgcccg cgccctggcg
     3421 ctcaacccca agctcatcat ctgcgacgag ccggtctccg cgctcgacgt ctcggtgcgc
     3481 gcccaggtga tcaacctcct ggaagatttg aagggccagt tcggcgtctc ctacctgttc
     3541 atcagccacg atctctcggt ggtcgagcac atcgccgacc gggtggcggt gatgtatctc
     3601 ggcaccctgg tcgaggtcgc cagccgcgac cagatctggc gcaacccgca gcatccctac
     3661 accaaggcgc tgctggcagc ggcgccgatc gccgatccca aggcggcgcg cgcgcgccag
     3721 cgcatggtcc tgcagggcga gctgccgagc gcaatcgatc cacccgccgg ctgcccgttc
     3781 cattcgcgct gcccgatcgc ccaggagcgc tgcaaggccg acaagcccgt gctgcgaccg
     3841 gtcggcggcg ggacgctggc ggcgtgccat ttcgtatgat ttggctatga tccgtcccat
     3901 gcaaatgcgc cttgccgcgg ttctgatggc cgccctgctc tcctcgaccg tggcgtcggc
     3961 ccaaaccatg gagtttgcct gtcccgatcc cggcacgacc ttcacctacg acagcggcac
     4021 caaggtcgtg gcgcgcggcc gcgatggcat ggactgcacc atggagatcg tcggcggcaa
     4081 gccttataag ctgcgcgcgc tcctgatcga caatccctcg cccgacggcg ccagcacatc
     4141 ggctttcatc gccgcccttc ggccggaacg gttgtggcct ttgcaggtcg gcaagaagat
     4201 cgaagcggac tacagcgccg acggacggag ctggcactac atcgtgaccg tggcgcgcca
     4261 cgagaagcgc agcggcccac gcgacgccct gatcgatacc ttcctgatcg aaatgaacga
     4321 gcagggcgac aagggccagc gcgcgctatc gcgctggtgg atctcgccgg ccgacaaata
     4381 cgccattcga ttcgattaca gcgacggcag cggacacgcc aaccgggcca ttgtcaccga
     4441 ggtcaagcgc tagacgcggc agacactggc cgcgctacaa aatccggttc aagccgggaa
     4501 gccggcgaaa cacggtagcc gacagcgcaa aggtcacgac ggcagcgcaa gccgtcagca
     4561 gcgcggcttt aacgagcgcc ggggccgcga ccggatgaaa cagaatggcc agcgcgatga
     4621 tcacgggcgg atggaacaga tagacggcga atgcattgtc ggagaggaac ttcgccggcc
     4681 ggccctgccg gtcgaaatat cggcgataga ggccgacgag ggcgaagctc attcccacgc
     4741 acaccagcgc ttcccacagg cacttgccgg cactgacgag attgaagccg ccattgtatc
     4801 gcgacgtgtc gtgctgcagt ccgccgccca gcatgatcag caaggcgagc agcggcagcg
     4861 acagcaggag tgtggcgagc gcccagcgcg atgcgatgcg ctgcggcagc cgctcgagcc
     4921 agcgaccgcg ataggccgtg acgcctgcgg cgaacatcag gatgtactga ggaaagtcgc
     4981 cgggatgcat gttgaggact gaaacggtct cgggcaccgc gatgcgcata agaaatgtcg
     5041 ccagcgccat gccggcggtg aaggccagga tggcccggtc gtgcagcccg tccgactcgc
     5101 gcggcctgtc tgcgggttgc gtctggcgca gcagtgcgta ggcgagcgac aagatcagga
     5161 gaaaagcgca aaaccacatc ggtccggtct cggaaagcca ttcgccgtcg cgaagatgga
     5221 tgagccactg atacgcgaag ccgccgctgc cccatgtctt ggataggaaa tactgggtca
     5281 gcgggccaac cacgagcatg tagagcagcg tcggcaagcc cagcctcagg aagcggtcac
     5341 ggctgaaacg agccagcccc ttgcgatcga aggctggcgc ggcgaagtag ccggcgatga
     5401 agaagagcag ggccatgaag aaggcctgca ggaacgtctg gtagagggcg aaggcgagga
     5461 tggtcccgaa gtccatctcg cttcgatcgg tgtagtacca actgccgaac gggctgtagg
     5521 tatcgctggc atgcatgctc aacaccagaa ggatcatggt ccatcggatg ttatcgatga
     5581 acgccaggcg catggcccaa tcaggcgacg gaggcgggct cggcattggc cccgcagatc
     5641 aacgtggcaa cgcgctcacc cggcgccggc cgatagactc ctgccatcag cgcggcaagg
     5701 cctgtagcgc cggccggctc ggcgatcagc cgcagttcct cccatagggc gcgctgcgct
     5761 tcccgcacgg cgtcatcgct gaccagcacg gactcgcgca ccagcttctg ggcgacctcg
     5821 aagttgggca cgccgatgcg gctggccccc agcgcgtcgg cggcgatgcc ggagattttt
     5881 acgtcgaccg gacggccggc gcggcgcgcc tcgtagagcg tcggcgtgcc ctcggtctcg
     5941 acggcgacga tcttcacgct ctcgccgatc gccgccgcgc agcctgcgat caggccgccg
     6001 ccgcccaccg cgaccagcaa tgtgtcgaac cccgcctgct cggcgaactc cagcgccacg
     6061 ctgccggccc ccgcgaacac cacgggatcc tcataggcgg gaacgacgag cgcgccggtc
     6121 tcggccgcgc gcttctccga ggccgcgcgc gcctcggcat agacggcgcc gacctggtgg
     6181 acgacggcgc catagtcttt aaggcgcgcc accttggcgg ccgaggcgat ggtcggcacg
     6241 aagatctcgg ccttgtggcc gagtgcgcgg gcggcgtagg ccgcggcggc gccgtggttg
     6301 ccgcccgagg cggcgacgat gccggcggca gggactttcg aggccagaag cttgtggaaa
     6361 gcgccgcggc ccttgaacga gccgctgagc tgcagcgatt cgagtttcag cgccagcggc
     6421 gcggccacgc cgagcgcgcc ggcggaaagc tcgatcgcgg gcgtgcggcg aacatgcggt
     6481 cggatgaggc gccaggcggc ctcgacgtcg ctacggccga tcatcggtca ggcgcggcgg
     6541 caggccgcga cgtggcgcag gaaatgatcg aagtccggcg ttttggcgcg cgggtccttg
     6601 gcagcttcgt catagcggcg caggcgcacg gcttcggcat agaggggatg gcggcggaag
     6661 tcgtcgatct cgccggccga catcggcccg ccctgcaggc caaggcttct caccgaatcg
     6721 ggcgagagct tggtgaaata gtccggttcg acggcgcaga gatagcgctt ggccgcgaca
     6781 tgcaggcgga ccggctcgct cacctccggg ccgaatcgct cggccagcca tgccgcaccc
     6841 cgctcctcgt gcacgtcgtc gatgccgcgc ccggcgggat cctcgccgag ttgatggatc
     6901 atgtggccga catcgtgcag cagcgaggcc agcacgg
//
LOCUS       DASWGA010000745         3937 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2365743, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000745 DASWGA010000000
VERSION     DASWGA010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3937
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2365743"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..412)
                     /locus_tag="VF991_17420"
     CDS             complement(<1..412)
                     /locus_tag="VF991_17420"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEX9558279.1"
                     /translation="MAGRWQGEGSQHQGARPYQEDSWALTPLGDGSLLAVVADGMGGH
                     AGGAVASKLAVEAFVHALEQGGGLADGLKDANAAVGKRAAAKPDLAGMGSTLVAAQVR
                     GDEVRWISVGDSPLFLVSDGKLERLNADHSMAPQI"
     gene            complement(429..1667)
                     /locus_tag="VF991_17425"
     CDS             complement(429..1667)
                     /locus_tag="VF991_17425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX9558280.1"
                     /translation="MNDMSPPAAERAPLEFNPLDPAFIADPYPFYRRLREQAPVFKTP
                     QGFWLITRYDDTAFVLRDKRFGKDFVGNMERRYGGSAGMNEPAIASLARTMLVLDPPD
                     HTRLRSLVTKAFTARRVADMRPRIKALVDEQLDRVIDKGEMDVMRDLAHRLPVIVICD
                     MLGIPEEHRAPFLAGSNVNGRILEPVPMTREELDQANLNTQMAGVYFDQLCELRRREP
                     KDDLTTELVRAEEAGDKLTAEELQANIGLLFGAGHETTTNLIGNGLLALHRQPDQWER
                     LKADPSLIPNAVEELLRYDSSVQITGRVTNAEVEIGGVTLGATENVIALLGAANHDPA
                     QYQDPDRLDVGRTNVRPLSFGGGIHYCLGAQLARLEAELVFTALVERLPNIELPEKDA
                     PAWRRSFTLRGLSKLPAVWH"
     gene            1728..3287
                     /locus_tag="VF991_17430"
     CDS             1728..3287
                     /locus_tag="VF991_17430"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase"
                     /protein_id="HEX9558281.1"
                     /translation="MFALTQGLRRAVQTKPDGISTHFSGRGRIWRESLERVSRVAGAL
                     SALGVRRGDRVAILALNSDRYLELMYAIPWIGAAMVPLNTRLAAPEIEYILSDSGAVV
                     LFIDTALSHHLTTLGDRTPGVREVVWMDDSPAPEGMLRFEDLANYESADDVGAANDDL
                     AGLFYTGGTTGQSKGVMLSHTNLVVNALNGVAGIGFNADTTYIHSGPMFHLADGASSF
                     GVTLSGGRHAFVPRFEPVEVLQTIQTEKVTHAQFVPTMINMLVNHPRFFEFDISSLSF
                     ILYGASPMPEGVLRKAMQLMPRVKLMHAYGMTEAAPIVTLLDPRYTTLDGRFAGRLKS
                     CGQAALACEVKVVDAERKEVARGTAGELAIRGANIMKGYWNKPEQTAAVLEDGWYYSG
                     DGATMDEQGFVYIVDRLKDMIISGGENVYSAEVENAISLLPDVAEVAVIGVPDEQWGE
                     RVHAIIVPKRGTNLTPEQVMEHCRDQIAGYKCPRSVDFRNAPLPLSGAGKVLKRELRE
                     PFWKGFTKAVN"
     gene            complement(3338..3691)
                     /locus_tag="VF991_17435"
     CDS             complement(3338..3691)
                     /locus_tag="VF991_17435"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9558282.1"
                     /translation="MKAERILQPVKDASHLYEVERRDRHAERPGFRISELQLSPTQTV
                     PWHFHTNISDTFYVLEGEMRLFLQKPKEEVRLGVGQSYVAVAGRPHLVTNAGKTSLTF
                     LILQGVGEYDYVPLV"
     gene            3757..>3937
                     /locus_tag="VF991_17440"
     CDS             3757..>3937
                     /locus_tag="VF991_17440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9558283.1"
                     /translation="MLTIYGVYRSRASRNIWLAHELGLPFKHVPVIQHDRLPDAEASG
                     APINTRSPAFLKINPN"
BASE COUNT          642 a         1333 c         1297 g          665 t
ORIGIN      
        1 cgatctgcgg cgccatcgaa tggtcggcgt tcaaccgctc gagctttccg tcggatacaa
       61 ggaagagcgg cgaatcgccg acgctgatcc agcgcacctc gtcgccgcgc acctgcgccg
      121 ccaccaaggt ggagcccatg ccagcgaggt cgggcttggc cgccgcgcgc ttgccgacgg
      181 cggcgttggc gtccttcagt ccgtcggcca gcccgccacc ctgctcgagg gcgtggacga
      241 aggcctcgac cgcgagcttg ctggcgaccg cgccgccggc atgaccgccc atgccgtccg
      301 ccaccacggc cagcagcgag ccgtcgccga gcggcgtcag cgcccaactg tcttcttggt
      361 acgggcgggc gccctgatgt tggctgccct cgccctgcca gcgtcccgcc atcttcaacg
      421 ccacactgct agtgccacac cgccggcagc ttgctcagcc cccgcaaggt gaagctccgc
      481 cgccaggccg gcgcgtcttt ctcgggcaat tcgatattgg gcaggcgctc gaccagggcg
      541 gtaaagacca gctcggcttc gagccgcgca agctgggcgc ccaagcaata atggatgccg
      601 ccaccgaacg acaagggtcg cacgttcgtc cggccgacat cgagcctgtc gggatcctga
      661 tattgcgccg ggtcgtggtt ggccgcgccc agcaaggcga tcacattctc ggtggcaccc
      721 agggtcacgc cgccgatttc gacctcggcg ttggtgacac gaccagtgat ctgcactgag
      781 gaatcgtagc gcagcagctc ttcgacggcg ttggggatca gcgacggatc ggccttcagc
      841 cgctcccact ggtcgggctg gcggtgcagc gccaacagcc cgttgccgat caggttggtg
      901 gtggtctcgt ggccggcgcc gaacagcagg ccgatattgg cctgcagctc ctcggccgtg
      961 agcttgtcgc ccgcctcctc ggcgcgcacc agttcggtcg tgaggtcgtc cttgggctcg
     1021 cggcggcgca gctcgcagag ctggtcgaaa tagacgccgg ccatctgggt gttgaggttg
     1081 gcctggtcga gctcctcgcg ggtcatcggc accggctcga ggatgcggcc gttgacgttg
     1141 ctgccggcca ggaagggcgc gcgatgctcc tcggggatgc ccagcatgtc gcagatcacg
     1201 atcaccggca ggcggtgggc gaggtcgcgc atgacgtcca tttcgccttt gtcgatcacc
     1261 cggtcgagct gctcgtcgac cagcgccttg atgcgcggcc gcatgtcggc gacccggcgg
     1321 gcggtgaagg ccttggtgac caggctgcgc aggcgcgtat ggtcgggcgg gtcgagcacc
     1381 agcatggtgc gggcgaggct ggcgatggcc ggctcgttca tgccggccga gccgccgtag
     1441 cggcgctcca tgttgcccac gaaatccttg ccgaagcgct tgtcgcgcag cacgaaggcg
     1501 gtgtcgtcgt agcgcgtgat cagccagaaa ccctgtggcg tcttgaacac cggcgcctgc
     1561 tcgcgcagcc ggcgatagaa cggataggga tcggcgatga aggccggatc gagcgggttg
     1621 aactcgagcg gggcgcgctc ggctgcggga gggctcatgt cgttcatggc ctttccttag
     1681 cacgaaccca cttgcggtgc gaacgagcgt gcccctagca tcacggcatg ttcgcactga
     1741 cccagggtct gcgccgtgcc gtccagacca agcccgacgg catctccacc cacttctccg
     1801 gacgcggccg catctggcgg gaaagtctgg aacgggtcag ccgcgtcgcc ggggcgcttt
     1861 ccgcactggg ggtgcgtcgc ggcgatcggg tcgccatcct ggcgctgaac agcgaccgct
     1921 atctcgagct gatgtacgcc atcccgtgga tcggcgctgc catggtgccg ctcaacacgc
     1981 ggctggccgc gcccgagatc gaatacatcc tgtccgactc gggcgccgtc gtgctgttca
     2041 tcgacaccgc gctgtcgcat cacctgacca cgctcgggga caggacgccc ggcgtgcgcg
     2101 aggtcgtgtg gatggacgat tcgcccgcgc ccgagggcat gctgcgcttc gaggatctcg
     2161 ccaactacga gtcagccgac gatgtcggcg cggccaacga cgatctcgcc ggtctgttct
     2221 ataccggcgg cacgaccggc caatccaagg gcgtcatgct cagccacacc aacctggtgg
     2281 tgaacgcgct gaacggcgtg gccggcatcg gcttcaatgc cgacacgacc tacatccact
     2341 ccggcccgat gttccatctc gccgacggcg cctcgagctt cggcgtcacc ctgtcgggcg
     2401 gccggcacgc cttcgtgccg cgcttcgagc cggtcgaggt gctgcagacc atccagaccg
     2461 agaaggtgac gcacgcgcag ttcgtgccga ccatgatcaa catgctggtc aaccacccgc
     2521 gcttcttcga gttcgacatc tcgagccttt ccttcatcct ctacggcgcc tcgccgatgc
     2581 ccgagggcgt gctgcgcaag gccatgcagc tgatgccgcg cgtaaaactg atgcatgcct
     2641 acggcatgac cgaggcggcg ccgatcgtga ccctgctcga tccgcgctac accacgctcg
     2701 acggccgctt cgccggccgc ctgaaatcgt gcggccaggc ggcgctcgcc tgcgaggtca
     2761 aggtggtcga cgccgagcgc aaggaggtcg cgcgcggcac ggcgggcgag ctcgcgatcc
     2821 gcggcgccaa catcatgaaa ggctactgga acaagcccga gcagaccgcc gccgtgctcg
     2881 aggacggctg gtactattcc ggcgacggcg ccaccatgga cgaacagggc ttcgtctata
     2941 tcgtcgaccg tctgaaagac atgatcatct cgggcggcga gaatgtctat tcggccgagg
     3001 tcgagaacgc gatctccctg ctgccggacg tggccgaagt ggcggtgatc ggcgtgcccg
     3061 acgagcagtg gggcgagcgg gtgcacgcca tcatcgtgcc caagcgcggc accaacttga
     3121 cgcctgaaca ggtcatggag cactgccgcg atcagatcgc cggctacaag tgcccgcgca
     3181 gcgtcgattt ccgcaacgcg ccgctaccgc tctcgggcgc cggcaaggtc ctgaagcgcg
     3241 agctgcgcga acctttttgg aaaggtttta ccaaggcggt gaactaggtg cgcgctgggg
     3301 acgcccaatt cgtcggctcg gacaagccgg cgatcagcta gaccagcggc acgtagtcgt
     3361 attcgccgac gccttgcagg atgaggaagg tgagcgacgt cttgccggca ttcgtcacca
     3421 ggtgcgggcg gccggcgacg gcgacgtagc tctgccccac gcccagccgc acctcctctt
     3481 tcggcttttg caagaacagg cgcatctcgc cttccagcac atagaaggtg tcgctgatgt
     3541 tggtgtggaa gtgccagggc acggtctgcg tcggcgacag ttgcagctcg ctgatgcgga
     3601 agccgggccg ctcggcgtgg cggtcgcggc gttcgacctc gtagagatgg ctggcgtcct
     3661 tcacaggctg caggatgcgt tcggctttca ttttatcatc ctttcgcaac gagctgcgag
     3721 gcattatgaa ccaggccgaa cacagcagga agaacgatgc tcacgatcta cggcgtctac
     3781 cgctcgcgcg cctcgcgcaa catctggctg gcccacgagc tcggcctgcc cttcaagcac
     3841 gtgccagtga tccagcacga tcgcctgccc gacgccgagg catccggcgc gccaatcaac
     3901 acccgctcgc ccgcgtttct caagatcaac cccaacg
//
LOCUS       DASWGA010000746         3941 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_975449, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000746 DASWGA010000000
VERSION     DASWGA010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3941
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_975449"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..728
                     /locus_tag="VF991_17445"
     CDS             <1..728
                     /locus_tag="VF991_17445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558284.1"
                     /translation="ASAELTLSALFLAVAIAIPLGVLAAVKQGTWIDHLCRIVTTAGV
                     SLPVFFTGLLFAYVFYYLLQWAPAPTGRLDVFLSPPADITGFYLIDSALTGNLETFWG
                     ALRQLALPAISMAIFSLAPLARMTRGSMLAVLGSDFVRTARASGLAPRTVVFTYAFRN
                     AVLPVITTLGMVFSFLLGANVLVETVFAWPGIGLYAVNALITSDYAPVQGFVLTMAVL
                     YVALNLLIDFLYGLVDPRVRLDS"
     gene            731..1576
                     /locus_tag="VF991_17450"
     CDS             731..1576
                     /locus_tag="VF991_17450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558285.1"
                     /translation="MLPLLRHARYVLSENPVTGLAFGLFAIFLVAALFGPLLAPYNPL
                     QSNAAMALKPPSAAHWFGTDQLGRDIFSRVLVATRLDLTIAFASVILAFLLGALSGVA
                     AGYFGGWTDRVVGRLADTIMAFPLFVLAMGIVAALGNKVINIVIATAIINFPLYARVA
                     RAEANVRREAGFVEAARLSGNGEARVVLGHVLPNIMPIMMVQMSLTMGYAILNAAGLS
                     FIGLGVRPPDAEWGIMVAEGANFIQSGEWWIALFPGAALMLAVFCFNLLGDGLRDIID
                     PLKRT"
     gene            1587..3505
                     /locus_tag="VF991_17455"
                     /pseudo
     CDS             1587..3505
                     /locus_tag="VF991_17455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615274.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            3517..3705
                     /locus_tag="VF991_17460"
     CDS             3517..3705
                     /locus_tag="VF991_17460"
                     /inference="COORDINATES: protein motif:HMM:NF024714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4089 domain-containing protein"
                     /protein_id="HEX9558286.1"
                     /translation="MAEEKPDIARLVDEAAKALGLPIAPEYRANVIVNYERSLVIAQP
                     LLEVELDDELTPAPVFRP"
     gene            3702..>3941
                     /locus_tag="VF991_17465"
     CDS             3702..>3941
                     /locus_tag="VF991_17465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9558287.1"
                     /translation="MSDPLSKQATASDIARAVMSGKTKATAVVEAALTRIETSEPTIN
                     AFTDVLAQRARKRAAEIDAGRHRGPLMGVPFAVKNL"
BASE COUNT          543 a         1422 c         1277 g          699 t
ORIGIN      
        1 cggcgtcggc cgagctcacg ctcagcgcct tgtttctcgc cgtggccatc gccattccgc
       61 tcggtgtgct ggcggcggtg aagcagggca cctggatcga ccatctctgc cgcatcgtca
      121 cgacggccgg cgtgtcgctg ccggtgttct tcaccgggct gctgttcgcc tatgtcttct
      181 actacctgct tcagtgggcg ccggcgccga ccggccggct cgacgtcttc ctctcgccgc
      241 ccgccgacat caccggcttc tacctgatcg actcggcctt aaccggcaat ctcgaaacct
      301 tctggggggc gctgcgccag ctggcacttc ccgcgatctc gatggcgatc ttctccctgg
      361 cgccgctcgc ccgcatgacc cgcggctcga tgctggcggt gctgggcagc gacttcgtcc
      421 gcaccgcgcg ggcgagcggg ttggcgcccc gcaccgtcgt cttcacctac gccttccgca
      481 acgccgtgct gccggtgatc accaccctcg gcatggtgtt ctccttcctg ctcggcgcca
      541 acgtgctggt cgagacggtg ttcgcctggc cgggcatcgg cctctatgcc gtgaacgcgc
      601 tgatcacctc ggactacgcg ccggtccagg gcttcgtgct caccatggcc gtgctctatg
      661 tggcgctgaa tctcttgatc gacttcctct acggcctggt cgatccgcgc gtgcggctgg
      721 acagctagcg atgctgccgc tgctgcgcca tgcccggtat gtcctctcgg agaacccggt
      781 caccggtctc gctttcggcc tgttcgcgat attcctggtg gcggcactct ttggtcccct
      841 gttggcgccc tacaatccct tgcagagcaa tgccgccatg gcgctgaagc cgccgtcggc
      901 ggcgcattgg ttcggcaccg atcagctcgg ccgcgacatt ttcagccgcg tgctggtggc
      961 gacccggctc gacctcacca tcgccttcgc ctcggtgatc ctggccttcc tgctgggcgc
     1021 gctgtcgggc gtcgccgccg gctatttcgg cggctggacc gatcgggtcg tcgggcgcct
     1081 tgccgacacc atcatggcct tcccgctgtt cgtcttggcc atgggcatcg tggcggcgct
     1141 gggcaacaag gtgatcaaca tcgtgatcgc caccgccatc atcaacttcc cgctctacgc
     1201 ccgcgtcgcc cgcgccgagg ccaatgtgcg gcgtgaggcg ggcttcgtcg aagccgcacg
     1261 cctttcgggc aacggcgagg cgcgggtcgt gctgggccat gtgctgccca acatcatgcc
     1321 catcatgatg gtgcagatgt cgctcaccat gggctacgcc atactcaatg cggccggcct
     1381 gtccttcatc ggcctcggcg tgcgcccgcc tgacgccgag tggggcatca tggtggccga
     1441 gggcgccaac ttcatccagt ccggcgaatg gtggatcgcg ttgttcccgg gcgccgccct
     1501 gatgctggcg gtgttctgct tcaatcttct gggcgacggg ctgcgcgaca tcatcgatcc
     1561 cctcaagaga acatagggca gcgcccatga ccgccgttcc tgccctggcc gtcgaggatc
     1621 tttcggtcga attccgcacc cgctcgggca ccgtcaaggt tttggagcag gtgggtttcg
     1681 aggtcgacaa gggcgagacc gtggcgctgg tcggcgaatc gggctccggc aagtcggtca
     1741 ccgctttcgc cgtcatgggc atcctcgatc cggcgggcaa ggtcacgtcg ggccgcgcca
     1801 tgttcggcgg cgccgacctt ttggcgcttc ccgagcgcga gctggccgag cagcgtggcc
     1861 gcgaactgtc gatgatcttc cagaacccgc gcacggcgct gaacccgatc cgccgggtcg
     1921 gccagcagat cgccgacgtg ctggtgcgcc atggcggggc gacccggccc gacgcgccgc
     1981 gagccgccgt ggaaatgttg aagaaggtgc gcattgccga tcccgagcgc cgcgtggaag
     2041 cctatccctt cgagctgtcg ggcggcatgt gccagcgcat catgatcgcc atcgcgctcg
     2101 cctgccggcc cgccctgctg atcgccgacg agccgaccac cgggctcgac gtcaccaccc
     2161 aggccgtgat catggacctg atcggcgagc tcgcgcacga gtcgggcatg gcaacgatct
     2221 tcatcaccca cgacctcgcc ctggccgccg aatattgcga ccgcatcgtg gtcatgcatg
     2281 ccggccacat cgtcgaggcg gcgcccggcc gcgcgctgtt cgccgagccg cgccatccct
     2341 attcggccaa gctcttggcc gcgacgcccg gcgggacggc ctcgctcgcc gagctggcat
     2401 cgatccccgg cggcctgccc gatctccgcc gtcccgacct gccggcctgc cgctacagcg
     2461 gccgttgcga gcgccgcatc gacgactgca ccaggccatt gccgcggcgc agcgtcggcg
     2521 atcgtcatat cgtggcctgc tggaaccccc tgtgagcgcg ctgctcgaca tcggcgagct
     2581 cgccaagcgc ttcgacgtcg gcggcaagcg cctgctgcac gccgtcgacg aggtgagctt
     2641 caccatcggc cgcggcgaga ccgtcggcct ggtgggcgaa tcgggctgcg gcaagtcgac
     2701 cctggtgcgc ctgatcaacc ggctgctcga tccgacgtcg ggcagcattc gtctcgccgg
     2761 caccgacctg gccgacctca aggcgcgggc cttcgccggc aatcccaacc gcgcccgcat
     2821 ccagatggtg ttccaggacg ccggcgattc gctcaacccg cgctatacgg ccgccgccgc
     2881 catcgccgat ccgatccgtc ggctgaagcg actctcaggc gccgacctca ggcgccgggt
     2941 cgaggcgctg gccgacatga ccggcctgcc gcgcgagctt ttatcgcgct ttccgcatca
     3001 gctttccggc ggccagaagg cccgggtcgg catcgcccgc gccatcgccg tcgagcccga
     3061 gcttctgatc ctcgacgagc cgaccgccgc tctcgacgtc tcggtgcagg tcgtgatcct
     3121 gaaactcctg cagcagctca agcgcgagct cggcatgagc tacctgttcg tgagccacga
     3181 cctcaacgtc gtgcgcctgc tgtgcgatcg cgtgctggtg atgtatctcg gcaagatcgt
     3241 cgaggagggc ccggcggccg agatcttcgc cgatccccgg catccctata cgcgcgcgct
     3301 ggtttcggcc atcccgcagg ccgagcccga caagcgcgtc ggccggctga ggctttcagg
     3361 cgagccgcgc agcccgatcg atcccgatcc gacggtctgc cgcttctacg gccgctgccc
     3421 gcggggcgag ccgcgctgcg cggcggaaat gccgctcttg cgcagcgccg gcccggcgcg
     3481 gcaggttgcc tgtcacttcg cttgagggag agaaccgtgg cggaagagaa gcccgacatc
     3541 gcgcgcctgg tcgacgaagc ggccaaggcg cttggcctgc cgatcgcgcc ggagtatcgc
     3601 gccaatgtga tcgtcaacta cgagcgctcg ctggtgatcg cgcagccatt gctcgaggtc
     3661 gagctggacg acgagctgac gccggcgccg gtgttccggc catgagcgat cctctgtcca
     3721 agcaggcgac cgcatcggac atcgcccgcg ccgtgatgag cggcaagacc aaggcgacgg
     3781 ccgtggtcga ggcggcgctg acgcgcatcg agaccagcga gcccacgatc aacgccttca
     3841 ccgacgtttt agcccaacgg gcgaggaagc gggccgccga aatcgacgcc ggacgccatc
     3901 gcgggccgct catgggcgtg ccgttcgcgg tcaagaacct g
//
LOCUS       DASWGA010000747         1794 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1738246, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000747 DASWGA010000000
VERSION     DASWGA010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1738246"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..969)
                     /locus_tag="VF991_17470"
     CDS             complement(<1..969)
                     /locus_tag="VF991_17470"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX9558288.1"
                     /translation="MIPRAHIPRATLRLQFHRAFTFADAQALVPYFARLGVSHLYASP
                     IAVARPGSMHGYDVIDATQINPELGGEEGLRALAASLAQAGLGLILDIVPNHMAADTA
                     NLWWADVLRHGRASPYARFFDIDWEADDKVLLPILGRPLEEVLAAGEIELGEHELRYF
                     SHRLPLVPGEGDALARQHYRLAWWRTASDRINWRRFFDINELVCLRMEESQAFEAVHA
                     LPLRLYAEELIDGLRIDHVDGLTDPAAYCRKLRQRLGRKAWLVVEKILMRGEALPRDW
                     ACDGTTGYDFMNDVSALQHDADGEACLAEAWSSLSGRSAEFAPEEQA"
     gene            complement(966..>1794)
                     /locus_tag="VF991_17475"
     CDS             complement(966..>1794)
                     /locus_tag="VF991_17475"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEX9558289.1"
                     /translation="DAFNPRGQDWGLTGFSPRALVAQGFGPFLATLRAALSHAGGVRI
                     DHVMGLMRLWLIPRGVPATEGAYLAYPLEDLLRLLALESHRHGAVVIGEDLGTVPPGF
                     RARLRRAGVASMDVMWFERTRLTFKKPARWRRDAVAMTTTHDLPTVAGWWSGEDIRTR
                     RALGLGAPGEEERREKDRLRLWRAFTGTGAAEGPPPPSDQPAAAVDAALAYVALSPSR
                     LMLAPLEDLLGLAEQPNLPGTTDEHPNWRRRLVPLARDLFEAPPVQARARIIARRRA"
BASE COUNT          287 a          611 c          659 g          237 t
ORIGIN      
        1 cgcctgctcc tccggcgcga actcggccga tcggccgctg agcgacgacc aggcctcggc
       61 caggcaggcc tcgccatccg cgtcgtgctg cagcgcgctc acgtcgttca tgaaatcgta
      121 gcccgtcgtg ccgtcgcagg cccagtcgcg cggcaaggcc tcgccgcgca tcaggatctt
      181 ttccaccacc agccaggctt tccggcccag ccgctggcgc agctttcggc agtaggccgc
      241 cggatcggtg aggccatcga catgatcgat gcgcaggccg tcgatcagct cctcggcata
      301 aaggcgcaac ggcagagcat gcacggcttc gaaggcctgc gactcttcca tgcgcaggca
      361 gaccaactcg ttgatgtcga agaagcggcg ccaattgatg cgatcggagg cggtgcgcca
      421 ccacgccagc cgataatgct ggcgagccaa ggcgtcaccc tccccgggca caagcggcag
      481 gcggtgggaa aaatagcgca gctcgtgctc gccgagctcg atctcgcccg ccgccagcac
      541 ctcttcgagc ggccggccga ggatcggcag caggaccttg tcgtcggcct cccagtcgat
      601 gtcgaagaag cgggcatacg ggctggcccg gccgtggcga aggacgtcgg cccaccacag
      661 gttggcggtg tcggcggcca tgtggttggg cacgatgtcg aggatcaggc cgaggccggc
      721 ttgggcaagt gaagccgcga gggcgcgcag gccctcctcg ccgccgagct cgggattgat
      781 ctgcgttgcg tcaatcacgt catagccgtg catcgagccc ggccgcgcga cggcgatggg
      841 cgaggcatag aggtggctga cgccgagccg cgcgaagtac ggcacgagag cctgggcatc
      901 ggcgaaggtg aaggcgcgat ggaactgcag ccgcagcgtc gcccgcggaa tgtgggcgcg
      961 cgggatcatg cgcggcgccg ggcgatgatg cgggcgcggg cctgcacggg cggcgcctcg
     1021 aacaggtcgc gcgcgagggg caccagacgg cgccgccagt tgggatgctc atcggtcgtg
     1081 ccgggcaggt taggctgttc ggcaagcccc agcaggtctt ccagcggcgc cagcatcagc
     1141 cgcgacggcg acagcgcgac ataggcgagc gccgcatcga ccgcggcggc cggctggtcg
     1201 ctgggcggcg gcgggccctc ggcggcgccc gtaccggtga aggcgcgcca cagtctgaga
     1261 cgatccttct cgcgccgctc ttcctcgccg ggcgcgccga ggccgagcgc gcggcgggtc
     1321 ctgatgtcct cgccgctcca ccagccggcg acggtcggca gatcgtgggt cgtcgtcatg
     1381 gcgacggcat cgcggcgcca gcgcgcgggc ttcttgaagg tgagccgcgt gcgttcgaac
     1441 cacatcacgt ccatgctggc gacgccggcg cggcgcaggc gggcgcggaa gccgggcggc
     1501 accgtaccga ggtcctcgcc gatcacgacc gcgccgtggc ggtgcgattc gagcgccagc
     1561 aggcgcaaaa gatcctccag gggataggcg agataagcgc cttcggtggc cggcacgccg
     1621 cgcgggatca gccagagccg catcaggccc atgacgtgat cgatgcgcac gcctccggca
     1681 tgactgagcg ccgcccgcag cgtggcgaga aaaggcccga agccctgcgc caccagggcg
     1741 cgcggcgaga agccggtgag gccccaatcc tggccgcgcg ggttgaaggc gtcg
//
LOCUS       DASWGA010000748         2201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1738389, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000748 DASWGA010000000
VERSION     DASWGA010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1738389"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..902
                     /gene="nadC"
                     /locus_tag="VF991_17480"
     CDS             <1..902
                     /gene="nadC"
                     /locus_tag="VF991_17480"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011655339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEX9558290.1"
                     /translation="TLPSLPTLMLEPVVRAALLEDLGRAGDLTTDSIVSAAMRAETAL
                     VARQSGIVAGLDAAVLAFRLVDPAIQVRVERPDGTRLAPGDRIAVVAGPARGMLTAER
                     VALNFLGHLSGVATATGTLVEAVKGHKARICCTRKTLPGLRALQKYAVRAGGGTNHRF
                     GLDDAVLIKDNHVAAAGGVGAAIRAARAGVGHLVKIEVEIDRLDQLDEALREKADAVL
                     LDNMAPDQLRDAVRLIAGRAIAEASGRITPATAPAIAASGVDLISAGWLTHSAQVLDI
                     GLDWRHASAAAELPVGERRLSLA"
     gene            complement(944..1420)
                     /locus_tag="VF991_17485"
     CDS             complement(944..1420)
                     /locus_tag="VF991_17485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX9558291.1"
                     /translation="MNPFVTVLIDWPRRVAAYFTWLPPLVARIVVGWVFLWSGWGKLN
                     ALPRMIENFRSWGIPYPEILTPFVSGVEFVGGILLLVGLFTRVAAAPLIVVMVVAIIS
                     AKWADVDSLETLLGFEEVSYLALFLWLAIAGPGPISLDYLLTRGRRDRPGASRIDL"
     gene            1491..>2201
                     /locus_tag="VF991_17490"
     CDS             1491..>2201
                     /locus_tag="VF991_17490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011653013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9558292.1"
                     /translation="MRDPLSESRLADIIDQARGKGPADLVIKSVGIFDLTSGEIATGD
                     IAIAGDRIVGTHERYTGATEIDGSGLLAVPGFIDSHVHCESTLVPPLEFDRCVVPRGT
                     TTAICDPHEICNVLGIPGLKFFLESAAVTVMDLRVQLSSCVPATHLETSGARLEAEDL
                     LPFKHHPKVLGLAEFMNVPGVLNKDPGVLRKLAAFSDVQIDGHSPLLSSYDLNAYIAA
                     GVRNCHETTSAAEAREKLA"
BASE COUNT          359 a          767 c          740 g          335 t
ORIGIN      
        1 tgaccctccc ttcgctcccc acgctcatgc tcgagcccgt cgtgcgcgcg gccctcctgg
       61 aggatctcgg tcgcgccggc gacctcacca ccgattcgat cgtgtccgcg gcgatgcggg
      121 ccgagacggc cctggtggcg cgccagtccg ggatcgtggc cgggctcgat gccgccgtgc
      181 tcgccttccg cctggtcgac ccggccatcc aggtcagggt cgagcggccc gacgggacgc
      241 gtctggcgcc cggcgatcgc atcgccgtgg tggcggggcc ggcgcgcggc atgctgacgg
      301 ccgagcgcgt ggcgctgaat ttcctcgggc atttgagcgg cgtcgccacg gcgaccggca
      361 cgctggtcga ggcggtgaag ggccacaagg cgcgcatctg ttgcacgcgc aagaccctgc
      421 ccggcctgcg cgccttgcag aaatacgccg tgcgcgccgg cggcggaacg aaccaccgct
      481 tcggcctcga cgacgccgtc ctgatcaagg acaaccacgt cgccgcggcg ggcggcgtcg
      541 gtgccgcgat ccgcgccgcg cgcgccggcg tcggccacct ggtcaagatc gaggtcgaga
      601 tcgaccggct cgaccagctc gacgaggcgc tgcgcgagaa ggccgacgcc gtgctgctcg
      661 acaatatggc gcccgatcag ctccgcgatg cggtgcgcct gatcgccggc cgcgccatcg
      721 ccgaggcgtc gggccgcatc acgcccgcca cggcgccggc catcgccgcg agcggcgtcg
      781 atctcatttc ggcgggctgg ctgacgcaca gcgcgcaggt gctcgatatc gggctcgact
      841 ggcggcacgc ttcggccgcg gccgaattgc cggttggcga gaggcgccta tcgcttgctt
      901 gaaggagcgc cgaggcgccg gccgattcgc aggccgccaa cgcttacaga tcgatgcgtg
      961 aggccccggg acggtccctg cggcctctcg tcaaaagata gtcgagggaa atcgggccgg
     1021 gcccggcgat ggccagccac aggaagagcg cgagatagga cacctcctcg aagccgagca
     1081 gggtttccag cgaatcgacg tctgcccact tggccgagat gatggcgacg accatgacca
     1141 cgatcagggg cgccgccgcg acgcgggtga acaggccgac cagcagcagg atgccgccga
     1201 cgaattccac gccggagacg aagggggtca ggatctcggg gtagggaatg ccccagctcc
     1261 tgaaattctc gatcatgcgc ggcagcgcgt tgagcttgcc ccagccgctc cacaggaaga
     1321 cccagccgac gacgatccgc gcgaccagcg gcggcagcca agtgaaatag gcggcgaccc
     1381 gtcgcggcca gtcgatcagc accgtcacga aggggttcat gagcccggct ccccgctttt
     1441 tgagaggatg ccgcattgcc atcgagaaga cacggcctta tttcctctcc atgagagacc
     1501 cgctctccga atcccgtctc gccgacatca tcgaccaggc ccgcggcaaa gggccggccg
     1561 atctggtcat caagtcggtc ggcattttcg atctcacctc gggtgagata gcgaccggcg
     1621 acattgccat agcgggcgat cgcatcgtcg gcacgcatga gcgctacaca ggcgccaccg
     1681 agatcgacgg aagcggcctt ttagccgtgc ccggcttcat cgacagccac gtccattgcg
     1741 aatcgaccct ggtgccgccg ctggaattcg accgctgcgt cgtgccgcgc ggcacaacga
     1801 cggcgatctg cgatccccac gagatctgca acgtgctggg cattcccggg ctgaaattct
     1861 tcctggagtc cgccgccgtc acggtcatgg atctgcgcgt gcagctttcc tcgtgcgtgc
     1921 cggcgacgca tctcgaaacc tcgggcgcgc ggctggaggc ggaggacctg ctgcctttca
     1981 agcatcatcc caaggtgctg gggttggccg agttcatgaa cgtgccgggc gtgctcaaca
     2041 aggatcctgg cgtgctgcgc aagctcgcgg ccttctccga cgtgcagatc gacggccatt
     2101 cgccgctgct gtcgtcctac gatctcaacg cctatatcgc cgccggcgtg cgcaactgcc
     2161 acgagacgac gtcggccgcc gaggcgcgcg agaagctcgc c
//
LOCUS       DASWGA010000749         1672 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1099986, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000749 DASWGA010000000
VERSION     DASWGA010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1099986"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(274..1461)
                     /locus_tag="VF991_17495"
                     /pseudo
     CDS             complement(274..1461)
                     /locus_tag="VF991_17495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011714171.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
BASE COUNT          256 a          569 c          543 g          304 t
ORIGIN      
        1 tcgcggcaac tgcgacgtgg ttcgctagga cctggcgcgc gcacgggatc acggtgtcgc
       61 tgcgaacgat cgagtgcgct gtagcgcccc ggcgtcaagc attgcgggcc gaggcgcgcg
      121 cttgtatccg cttcgagacg ccgccgggca gaatgttgaa tatggcttgg cgggcgttgc
      181 ctggattgga tactacgcgg cctgggattt ctcctcaagg gcgccgagtt tgggatgatg
      241 cgccgccaag gcgcctcgga gtgcggggag ctattttgag gctttcagtc gcctgaagcc
      301 cttggcggcc tcgatcatgc cggccgcggt ccagcgcagc gccatcttgg catcgcgcca
      361 gcgtttgacg ttgcggcaga cgcgtcggat ggtgccgttc atgttctcga cgatgttggt
      421 gcaggcgagc gagcggcgca gttgcatggg caggccgagg cggctcacgg tcaggatctc
      481 gtcgagccct tcgaggatgc tcgcggcgac gccgggtgcg tcgcgctcca gccttcgggc
      541 gaggttctcg atcaggcgct tggccgtctc ggcgtcgtcc agctcccagg cctggcgcag
      601 caccttgcgg accgagccgt gcaggtgctt gggcaggcgc tccaggatgt tcctggcctt
      661 gtgcacctgg cagcgctgga tcggcgcgtg gcggccgaag gtctgccgga tcgccttggt
      721 caacgccttc gcgccatcga cgatgaacag gcggcacacg gcaggatcga ggccgcgccc
      781 gaccagattg tccaacagtg cctggacggt tgcggcgttc tcggttgcgc cctcgatcac
      841 gctcagcggg tgcttcgtgc cgtcggcgtc gatgccgacg gccgccacca ggatcaactc
      901 atcctcaaag tggagcccgt cgatctggat cgccagcagg tcaagctcgg acaggtccgc
      961 ggccatccat tcggccatcc gttccgccga gagctcgaca aagcggcgcg acaccgccga
     1021 tttcgagcga ccgtccgcct tgacggtcgg cacgtcgccc tcgggcagcc gcacggcacg
     1081 gccgaaccgg cgcgtcgaca cgttgataag catcaggttc atcgcccact tgccgagcca
     1141 gtcttccgcc cgcgccgctt cccagctcgg caacgcaacc tcgccgccgg cccgcgagcg
     1201 cacgcgcggc cgatcgaccg gaacggtgcc gccgtggaag ccgatcttcc ctttggtccg
     1261 accccagcga tggcccctgc gctccggatc gcggccgtga cgcgggccgc acagctgcgc
     1321 cgcatccgct tccagcatgc tcgaaagcgt cgcgatgccg gccgtcaggc agaaccgctc
     1381 gaagctcgct ccgacatcct gccaagcctc ctcaaccagt gccgtcgcgt cgattgccgc
     1441 cggtgtgcta ttcctcttca tggcgttgcc tttccttcgt ggattgagca ccccgagcct
     1501 acaggctcaa ggcgggcaac gccgacctcc tatttcaaca tcaaccggga catccccctc
     1561 gatcctgatc aggtcgagag acggcgcata tggctaacct cgacgctcaa acagcggatc
     1621 gaggaaccat tcttttccgc ggtcagggcg catctgaagc gcttcgttat tg
//
LOCUS       DASWGA010000750         3154 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2366441, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000750 DASWGA010000000
VERSION     DASWGA010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3154
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2366441"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VF991_17500"
     CDS             complement(<1..720)
                     /locus_tag="VF991_17500"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:NF011202.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEX9558293.1"
                     /translation="MRHAHAKVNLWLNVVGRRADGYHLLDSLVAFVDLADTLTTRPAK
                     RLSLELDGPYAAELARDPDNLVLKAARLLAERAGVAPRAAIALGKHIPVAAGLGGGSA
                     DAAAVLRELVDLWRLVMAEEELFDLARSLGADVPMCLAGCTALVSGVGERLNPAPPLP
                     PAAILLVNPGTALPTHEVFAARRGPFSQPTPPAGPWRDLPELATELLRRGNDLSEAAI
                     SLRPAIADVLAFLRGSAGARHV"
     gene            complement(746..2524)
                     /locus_tag="VF991_17505"
     CDS             complement(746..2524)
                     /locus_tag="VF991_17505"
                     /inference="COORDINATES: protein motif:HMM:NF024821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9558294.1"
                     /translation="MRRIPLALLSAALLFTLPAVGGAQQGGQPRPAPAAKPVPPRGPL
                     VAPIPLSGRYLAARVAEQDHDYDTAADEIDRALAQTPDDPELVYAAFRLRMYAGRVDA
                     AAELAPQVLATKPGDGFANLVLAAQAIKKGDYRAAELQVGRIGAENQLGPLRDYVLVW
                     LKAGAKDFAGARATLAKLRPAGGERAEGPALVIEGQIDEMAGDKAAAETKYRRAVGLD
                     RSSLRTTIAVAEGLRRLGKGEEARELLKTYGEKYSDAIVMDGLIGPNAPAPKPLTAAA
                     GVAEILFDIGGILASDPRNQRTDLALIFYQLAASLRPEHDFAWLMIAGLYEQFQLVPK
                     AVTALGKIGPSSPLYWQARLRIAALDAQQEKFDQAVTRLRALVAEKPDRIDAALTLAD
                     LLRGKERYAEAVQAYDTAIQRLHNIEERHWSVFFGRGIVLERLKQWPKAEQDMKKALE
                     LSPEQPHVLNYLGYSWIDQGLHLDKGMKMLERATELRPDDGAITDSVGWAFYRLGQYD
                     KAVEWLERAIEQKSDDATITEHLGDAYWHVGRQREARFQWERALNQKPDKDRLPVIKD
                     KLANGLSSANDKPTVYEKAADGKQGG"
     gene            complement(2530..>3154)
                     /locus_tag="VF991_17510"
     CDS             complement(2530..>3154)
                     /locus_tag="VF991_17510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX9558295.1"
                     /translation="SGMLAAESAFEALAAGKTGGDELIAYPVKLKASWIWKDLDKVRN
                     VKPALRWGTTLGTLYGGIDMWLHDLGVRVPWTMHHKKADHECLRPAAEFQPIHYPKPD
                     GVISFDKLSSVFLSNTNHEEDQPVHLKLRDPSIPIAVNLPLYAEPAQRYCPAGVYEVV
                     TADNGQPRFQINAQNCVHCKTCDIKDPAQNIDWTVPEGGGGPNYPNM"
BASE COUNT          488 a         1067 c         1080 g          519 t
ORIGIN      
        1 gacatggcgc gcgccggcgc tgccgcgcaa gaacgccaat acgtcggcga tggcaggacg
       61 caacgagatc gccgcctcgc tgagatcgtt gccgcgtcgt aaaagttcgg tcgcgagttc
      121 cggcagatcg cgccatggcc ctgcgggcgg tgtgggttgc gagaacggcc cgcggcgcgc
      181 ggcgaagact tcgtgcgtgg gcagcgccgt accgggattg accagcagga tggccgcagg
      241 cggcagcggc ggcgcgggat tcaggcgctc gcccactccg gacaccagcg ccgtacaccc
      301 cgccaaacac atcggcacgt cggcgcccaa cgaccgcgcg agatcgaaca gctcctcctc
      361 ggccatgacc agacgccaga gatcgacgag ctcgcgcagc accgcggcgg catcggccga
      421 tccgccgccc aggccggccg ccaccggaat atgcttgcca agcgcaatcg ccgcgcgcgg
      481 cgccacgccg gcgcgctcgg ccagcaggcg cgccgccttc agcaccaaat tgtcggggtc
      541 gcgggcgagc tcggccgcat acggtccgtc gagttcgagc gacaggcgct tagcgggccg
      601 ggtcgtaagc gtatcggcga gatcgacgaa ggcgaccagc gagtcgagca gatgatagcc
      661 gtcggcccgg cggccgacga cgttcagcca gagattgacc ttggcgtgcg cgtgccgcac
      721 tggaatgcct cagcggatcg ccgcctcagc caccttgctt gccgtcggcg gccttctcat
      781 agacggtcgg cttgtcgttg gcgctactca gcccgttggc gagcttgtcc ttgatcaccg
      841 gcaggcggtc cttgtcgggc ttctggttga gcgcccgctc ccactggaag cgcgcctcgc
      901 gctggcggcc gacatgccag taggcatcgc ccagatgctc ggtgatggtg gcatcgtcgc
      961 tcttctgctc gatcgcccgc tccagccact ccacggcctt gtcgtactga ccgaggcggt
     1021 agaacgccca accgaccgaa tcggtgatgg cgccgtcgtc gggccgaagc tcggtcgcac
     1081 gctccagcat cttcatgccc ttgtcgagat gcaggccctg gtcgatccag ctgtagccga
     1141 gatagttcag cacgtgcggt tgctcgggcg agagttcgag tgccttcttc atgtcctgct
     1201 cggccttggg ccactgtttc aggcgctcca gcacgatgcc gcggccgaag aacaccgacc
     1261 aatggcgctc ttcgatattg tgcaggcgct ggattgccgt gtcgtaggcc tgcacggctt
     1321 cagcataacg ctccttgccg cgcagcaagt cggccagggt gagcgccgcg tcgatgcggt
     1381 ccggcttctc cgcgaccagc gcgcgcagcc gggtcacggc ctgatcgaac ttctcctgtt
     1441 gcgcgtcgag ggccgcgatg cgcagccgcg cctgccagta gagcggcgag gagggaccga
     1501 tcttgcccag cgccgtcacc gccttgggca cgagctggaa ctgctcgtag aggccggcga
     1561 tcatcagcca ggcgaaatca tgctccggcc gcaggctggc ggcgagctgg tagaagatca
     1621 gcgccaggtc ggtgcgctgg ttgcgcgggt cggaggccag gataccgccg atgtcgaaca
     1681 ggatctccgc gacccccgcg gccgctgtca gcggcttggg cgccggtgcg ttgggcccga
     1741 tcagcccatc catgacgatg gcgtcgctgt acttctcgcc ataggtcttc aacagctcgc
     1801 gcgcctcctc gcccttgccc aggcgacgca ggccctcggc gacggcgatg gtggtgcgca
     1861 ggctgctgcg gtcgagcccc acggcgcggc ggtacttggt ttcggcagcg gccttgtcgc
     1921 ccgccatctc atcgatctgg ccctcgatca ccaaggccgg accctcggcg cgttcgccgc
     1981 cggccggccg cagcttggcg agcgtggcgc gggcaccggc gaaatccttt gcacccgcct
     2041 tcagccagac cagcacatag tcgcgcaacg ggccgagctg gttctccgcg ccgatgcggc
     2101 cgacctgaag ctcagccgcg cggtaatcac ccttcttgat cgcctgcgcc gccagcacga
     2161 ggttggcgaa gccgtcgccc ggcttggtcg ccagcacctg cggcgcgagc tcggccgccg
     2221 cgtcgacgcg gccggcatac atgcgcagcc ggaaggcggc gtagaccagc tccggatcgt
     2281 cgggagtctg agccaacgcg cggtcgattt cgtcagcggc ggtatcgtag tcgtgatcct
     2341 gctcggccac gcgcgcggcg agataacggc cgctcagcgg gatcggcgcc accagtgggc
     2401 cgcgcggtgg aaccggtttg gccgcgggag ccggccgtgg ctgaccaccc tgctgggccc
     2461 cgccgaccgc agggagggtg aagaggagcg ccgccgacag cagcgcgagg ggtatgcgtc
     2521 gcatgcagct cacatgtttg gatagttggg accgccaccg ccctcgggca cggtccagtc
     2581 gatgttctgc gccggatcct tgatgtcgca ggttttgcaa tgaacgcagt tctgcgcatt
     2641 gatctggaag cgcggctggc cgttgtcggc cgtcacgacc tcgtaaacgc cggccggaca
     2701 gtagcgttgc gcgggctcgg catagagcgg cagattgacc gcgatcggga tcgaagggtc
     2761 gcgcagcttg aggtgaacag gctggtcctc ctcgtggttg gtattcgaaa ggaacaccga
     2821 ggagagcttg tcgaaggaga tcacgccatc gggcttggga tagtggatcg gctggaattc
     2881 ggcggcgggc cgcaggcatt cgtggtcggc cttcttgtga tgcatggtcc acggcacgcg
     2941 gacgccgaga tcgtgcagcc acatgtcgat gccgccatag agcgtgccca gcgtcgtgcc
     3001 ccagcgcagc gccggcttga cgttgcgcac cttgtcgagg tccttccaga tccacgacgc
     3061 cttgagcttc accggatagg cgatcagctc atcgccaccg gtcttgccgg ccgccagcgc
     3121 ctcgaaggcc gactcggccg ccagcatgcc gctc
//
LOCUS       DASWGA010000751        11448 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1858382, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000751 DASWGA010000000
VERSION     DASWGA010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 11448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11448
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1858382"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..845
                     /locus_tag="VF991_17515"
     CDS             <1..845
                     /locus_tag="VF991_17515"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9558296.1"
                     /translation="PFLRRLRRLPLYVYFALRILLYFVVIIGGLLVMRVLIVYRVSPF
                     TMDAVFRNSIIFSIAMAVFGNLVILMGTLLGFGTLKSLLTGRYVQPRHEQRAFLLIDM
                     KDSTGLAERLGPIRFHEVLNEFFRDISDAALECGAEIHKYVGDEAILTWPSGRALTES
                     DCLACAFVARDFITANAKRYGERFGVVPEFRAALHYGEIVAGEIGDVRREIAYVGDTL
                     NVAARLLDAAKALGRDVLVSTELLERAVLPSGIVAEPLPTLTVRGRAAPLGISALQRL
                     GAGT"
     gene            complement(778..1788)
                     /locus_tag="VF991_17520"
     CDS             complement(778..1788)
                     /locus_tag="VF991_17520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9558297.1"
                     /translation="MNQRWLLYAIAGAALIALPFVYRDPYHLHILILILIWSFAYTSW
                     SMMGRFGLVSLGHGGFMGIGAYVTALMWNHLDVSPWIGIPVALVCAGALALVVGYPCF
                     RFRITGHYFVLVTLALSGIVLQVITATRDWTGGSLGYTPERTKGNHLLALQFDDKTTW
                     YLIALGVWAAGLVIWRLVDRSMARYALEAISEDEDAAAAAGVNVTFEKLRITVISALM
                     TALAGALYCQYQMFISPDTVSGIAVSLQMVFAVVVGGIYVALGPTVGAIITIMLAEGL
                     RIGFGTKAVGWDNLVYGALLVLFIIFLPKGILGSLLERLRFRRPGAATPKSQAAPLGR
                     AP"
     gene            complement(1799..2680)
                     /locus_tag="VF991_17525"
     CDS             complement(1799..2680)
                     /locus_tag="VF991_17525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9558298.1"
                     /translation="MESFLEIFDVYLLEAMINGILLGGVLALLALGLNLIFGVIDVTW
                     ICYAELVMIGMYGMYYLVQYYGLSYYLAAPLAILLVAGLGALLHYLVIAPLLSGAPIN
                     QLLATGGVLFVLQSFATVAFGIDFRNLGIRLPVLAFGEMHFSYSRLLAFGAAAAGMIV
                     VYFFMKRTYIGTAIRAIAQDRQIMALMGVDTGRIYLITSALGGALAGLAACLLVLQYD
                     VHPFVGLSFGPITFLICVLGGLGNFVGGFVAAFLFAEIISLGGLFSDLEWGYVLAFAF
                     FILMMFIRPAGLLARRQ"
     gene            complement(2781..3485)
                     /locus_tag="VF991_17530"
     CDS             complement(2781..3485)
                     /locus_tag="VF991_17530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558299.1"
                     /translation="MLELRSVDAGYGTFQALFGVSLEVKAGEAVGVIGPNGAGKTTLM
                     RVISGLIRPSRGAIAMEGTDVVATAAHRIVGLGIAHVPENRRLFPRLTVEDNLKMGAF
                     MPQARAKYGERLEVVFTLFPRLKERRRQFAGTMSGGEQQMCAIGRALMSDPRLLLLDE
                     PSAGLAPVVVQQVFELLKRIRAGGLTVLIVEQNVQQVLRVVDRAYLLEAGTIRASGTS
                     AEMMASDTIKQAYLGV"
     gene            complement(3498..4253)
                     /locus_tag="VF991_17535"
     CDS             complement(3498..4253)
                     /locus_tag="VF991_17535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558300.1"
                     /translation="MLVVEGLVKRFGGFTAVNKVSFKVDQGEILGLIGPNGSGKSTIF
                     NVLSGTFPPSAGSIAFEGHEIAGLAPHRIINRGIGRTFQIPRPFRRLTLFENVALAGF
                     YGQGRHSAAKANEAAEHALAMVGLPTDRKALVDGLGAAGLKKLELAKALATGPKLLLA
                     DESLGGLDETEMDQAADMLRKIRDELGITIIWVEHIMGVLMRVVDRVMVLDHGEKICE
                     GLPSAVSNDPRVIEVYLGTDAVATQAAAAEARR"
     gene            complement(4284..5594)
                     /locus_tag="VF991_17540"
     CDS             complement(4284..5594)
                     /locus_tag="VF991_17540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558301.1"
                     /translation="MANGRIGRLLGPVVAALAIFGLVATAQAQDKKLKIGVVYDLTGP
                     LAGGGSELQYIGAKIVLDQFTKTGVEGYKIEAIYADAQSKPDVAINEAVRLIEQEKVD
                     MVLGFYSSAQCVPVAARVEQLKKFMWITTCISSAVLENRNLKYVFRAQPSGQQFGSMT
                     MDFINQNAKAKLGKDPKDLRVAIIHEDGAYGVDVAKGNEAGAKKAGFNIVLKEGYSAT
                     APDLSALVTKLKRARPDVIFHTGYNPDITLLLRQAREQGLKVAALVGHGAGYGVYEKL
                     KEGLGSDVNYFFNADPISIWLSNPKTLDPKLPSEIKFVGDEFDKVKPGVAIRSAHVGM
                     AASNTFLFLTDVLPRAIKKYGGIDSEALRKAALDTDIAEGGTMLGFGVKFEGEGAAMA
                     GQNDRAFPVIIQYVDDKSYVVWPKSQAQREAVLPLPAGTTYSNK"
     gene            5786..6787
                     /locus_tag="VF991_17545"
     CDS             5786..6787
                     /locus_tag="VF991_17545"
                     /inference="COORDINATES: protein motif:HMM:NF012340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C1 family peptidase"
                     /protein_id="HEX9558302.1"
                     /translation="MTDIAQLTQLGPRVRTLRALGIDTIEHFVAATQVAGPELARLLG
                     GNLDALVAPAMAMAQAMSAEVETELVALPCSLGARTDDITPITETVPALALDIPVGAC
                     GPPLITPAIPIRNQQFRGTCVAHSVVAALEYWLDSSGSYQDMSEQFLYWNCKNNDGAP
                     TQPGTWIRVAAPLVQRDGVCPEGIWPYNPNPIPGNEAQNPVPMGAQRQALPYRVPVVT
                     ALPATSISDYKTALASQRWVPFSIPVYNSWYQSSQVRLTGDITNPIPGETRVGGHAMC
                     IVGCIDQPERPELGGGRFILRNSWGTGWGQTSPYGSGYGTIPYIYIQRFGMEAYTLG"
     gene            6832..7242
                     /locus_tag="VF991_17550"
     CDS             6832..7242
                     /locus_tag="VF991_17550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558303.1"
                     /translation="MAGSGPPTYISALQIGPEEAAKLRALGADTPQQLLAQIRAAPAA
                     FTRYLGTETARRIERALSAMVPSDEPTQPIPPPGQLGVPLGPAPSNVADSKVDLARRD
                     ELFNRIQRLKAEHAPAHQVEAAERALDDLFQRSS"
     gene            complement(7239..9191)
                     /locus_tag="VF991_17555"
     CDS             complement(7239..9191)
                     /locus_tag="VF991_17555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl sulfatase dimerization domain-containing
                     protein"
                     /protein_id="HEX9558304.1"
                     /translation="MASASAVPVPASHLDVARDAEPATKAAHAAMAARLPFGDVADFQ
                     AAKRGLIAPVPDGMVRAANGTVLWNLSEYAFIDGELAPATVNPSLWRMARLNLANGLF
                     KVTDRLYQLRGFDISNMTVIEGDSGVIVIDPLTTAEVARAALAHYRAHRPNKPVVAVI
                     YTHSHIDHYGGVRGVIDEADVKSGRIPVIAPDGFMQAVSGENVLAGLPMARRAQFQFG
                     TLLPRGARGQVDAGLGKSVARGTPGLIAPTRSIVQPVEEHTIDGVRIVFQLAPETEAP
                     AEMHMFYPELGVLNMAENACPVLHNFIPLRGAVARDPRIWAKYIGDAIALYAPHTEIL
                     IGQHHWPTWGREAVLDHLEAQRDLYKHIHDQTLRYMNKGWRPAEIAEAIDLPPGLAER
                     WSARGYYGSVSHNVKAVYQRYLSWYDGNPCNLHPLPPAPAAAKFVEYMGGAAAVIARA
                     RSDFAKGQYRWVAQVMKEVVYAEPNNIEARALCADALEQMGYQAESATWRNAFLYGAQ
                     ELRHGVFPLAARMAMGADTLAGLTSDMFFDLLAIRLDPAKAAGQSMTINWHFTDRAEK
                     LLLTLKRCTLSHRLGEWSDAAAASITTTRDTLDAMVLGKTTAPEAMTAGTLRIAGDPS
                     RLAALFAMFDQPSGLMFDVLTAGAGR"
     gene            9237..9590
                     /locus_tag="VF991_17560"
     CDS             9237..9590
                     /locus_tag="VF991_17560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEX9558305.1"
                     /translation="MAPRKLSLTAIRRAVSTLPGVEEGTSYGTPAWRHRGKLLARLHR
                     DGESIVLKVGNETRDHLLQADSQTFFITDHYVGYPTVLARLDRLSAADLKKLLARAMV
                     TKAKVSSRGRRPRDL"
     gene            complement(9656..10630)
                     /locus_tag="VF991_17565"
     CDS             complement(9656..10630)
                     /locus_tag="VF991_17565"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558306.1"
                     /translation="MLKRRSVLAGAAGWTIVGAQAVRAQTWPSQPIKIVVPYIPGGAT
                     DTAGRIVAEKMTAPLGQQVIVENRGGGNTIIGMELVAKSKPDGHTLLLGTTTLATNAA
                     LGLKQPYDPLKDFQPISTLADIPDLIAYNNDVPARSYAEFAEWVNKQPQKTRFATSGI
                     GNQPHLWCELFKTRNKLNMEVVGYKGSADAIRDVLAGHVPMICDVVLPTGNHVKAGRM
                     KGLVVASRERSPMCPDVPTVIELGMPDMESAVFFGLVAPAGVPRPVVDRLNALARQII
                     GDPEVQKKFAELGYFTTGSTPEAYLDKLKFETERWTKVVKDNNIKVEG"
     gene            complement(10655..>11448)
                     /locus_tag="VF991_17570"
     CDS             complement(10655..>11448)
                     /locus_tag="VF991_17570"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558307.1"
                     /translation="NGLAGNMGIAIAAGVSVYIAQRFGWQMAFVLPGVISLVCAAAFV
                     LLVPREAEAPAKRQPKMIDLPPRVMARVFAIMTFTAVTGSIIFNFTTNGNGELLRERV
                     KGAVQDPAELAAMLFVIFSLASLAQLVVGKLIDRFPLKNIYLPIVLLQVPLFLIASQV
                     EDWALFATAIGFMLLVFGAIPFTDAMIVKYIDDRMRSRVTGARLAIGFGVSSIVVALI
                     GPMVKAAGFPVVLMVLAGVAFCGFAAISLLPAEHEMGKASLKPAE"
BASE COUNT         1986 a         3813 c         3740 g         1909 t
ORIGIN      
        1 tccccttcct gcggcggctg cggcggctgc cgctatacgt ctatttcgcc ctgaggatac
       61 tgctctactt cgtcgtcatc atcggcggcc tgctcgtgat gcgggtgctc atcgtgtaca
      121 gggtatctcc cttcaccatg gacgcggtgt ttcgtaactc gatcatcttc tcgatcgcca
      181 tggcagtgtt tggcaatctg gtcatactga tgggcacgtt gctgggtttc ggcacactca
      241 agagcctgct gaccggccgc tacgtccaac cccggcacga gcagcgcgcc ttcctgctga
      301 tcgacatgaa ggattcgacg ggtctcgccg aacggctcgg ccccatccga tttcacgagg
      361 tgctgaacga attctttcgc gacatctccg acgccgccct cgaatgcggg gcggaaatcc
      421 acaaatacgt gggcgacgag gcgatcctga cctggcccag cggccgggcg ttgaccgaga
      481 gcgattgcct ggcctgcgcc ttcgtcgcgc gcgacttcat cacggcaaac gccaaacgct
      541 atggtgaacg cttcggcgtc gtgcccgagt tccgcgctgc ccttcattac ggcgagatcg
      601 tcgccggcga gatcggcgac gtgcgccgcg agatcgccta tgtcggcgac acgctgaacg
      661 tggcggcgcg gctgctggac gcggccaagg ccctcggccg cgacgtgctg gtgtcgaccg
      721 agctgctgga acgggcggtc ttgccgtcgg gcatcgtcgc cgagcccttg ccgaccctta
      781 cggtgcgcgg ccgagcggcg ccgcttggga tttcggcgtt gcagcgcctg ggcgccggaa
      841 cctgagccgt tcgagcaggc tgcccaaaat gcccttgggc aggaagatga tgaacagcac
      901 cagcagcgcg ccgtagacca ggttgtccca gccgaccgcc ttggtgccga agccgatgcg
      961 caggccctcg gccagcatga tggtgatgat ggcgccgacc gtcggcccga gcgccacgta
     1021 gatgccgccg accacgacgg cgaacaccat ctgcagcgac acggcgatgc cgctcaccgt
     1081 gtcgggcgag atgaacatct ggtactggca gtagagcgcg cccgccagcg ccgtcatcag
     1141 cgcgctgatg acggtgatcc tgagcttctc gaaggtcacg ttgacgccgg ccgccgccgc
     1201 cgcatcctcg tcctccgaga tcgcctcgag cgcatagcgc gccatgctgc ggtcgaccag
     1261 gcgccagatc acaagcccgg cggcccacac gccgagcgcg atcaggtacc aggtcgtctt
     1321 gtcgtcgaac tgcagcgcga gcaggtggtt gcccttggtg cgctcgggtg tgtagccgag
     1381 cgagccgccg gtccagtcgc gcgtcgccgt gatgacctgc aaaacgatgc ccgagagtgc
     1441 cagcgtcacc agcacgaaat aatggccggt gatgcggaag cgaaagcacg gatagccgac
     1501 gaccagcgcc agcgcgccgg cgcagaccag agcgacggga atgccgatcc acggcgagac
     1561 gtcgagatgg ttccacatca gcgccgtgac ataggcgccg atgcccatga agccgccatg
     1621 gcccagcgag accaggccga agcggcccat catcgaccac gaggtgtagg cgaacgacca
     1681 gatcaggatg aggatcagga tgtgcaggtg ataggggtcg cgatagacga acggcagcgc
     1741 aatcagcgcc gcaccggcga tcgcgtagag cagccagcgc tggttcacgg cgacctcgtc
     1801 attggcgcct cgccagcagg ccggccggcc ggatgaacat catcaggatg aagaaggcga
     1861 aggccagcac atagccccat tcgaggtcgg agaacaggcc gcccagcgag atgatctcgg
     1921 cgaacaggaa ggcggcgacg aagccgccga cgaagttgcc gaggccgccc agcacgcaga
     1981 tcaggaaggt gatcggcccg aacgacaggc cgacgaaggg atggacgtcg tactgcagca
     2041 ccagcaggca ggccgccagc ccggccagcg cgccgcccag cgccgaggtg atgaggtaga
     2101 tgcgcccggt atcgacgccc atcagcgcca tgatctggcg atcctgggcg atggcgcgga
     2161 tggcggtgcc gatataggtc cgcttcatga agaaatagac cacgatcatg ccggctgccg
     2221 ccgcgccgaa ggcgagcagg cgcgagtagc tgaaatgcat ctcgccgaag gccagcaccg
     2281 gcaggcggat gccgagattg cggaagtcga tgccgaacgc cacggtggcg aagctctgca
     2341 gcacgaacaa cacgccgccg gtcgccagca gctggttgat cggcgcgccc gacagcagcg
     2401 gcgcgatcac caggtagtgc agcagcgccc ccaaaccggc gaccagcagg atcgccagcg
     2461 gcgccgccag gtaatacgac aggccgtagt actgcacgag gtagtacatg ccgtacatgc
     2521 cgatcatcac cagctcggcg tagcagatcc aggtgacgtc gatgacgccg aagatcaggt
     2581 tcagcccgag cgccagcaac gccagcacgc cgcccagcag aatgccgttg atcatggctt
     2641 cgaggagata gacgtcgaag atttcgagga atgactccat ggttcgtcct caaagcatcc
     2701 tgtcgtcctg agcgcagcga aggacctcat cgccgcttgc cacgggcatg agatccttcg
     2761 ctgcgctcag gatgacaacg ttacacacca aggtacgcct gcttgatggt gtcgctcgcc
     2821 atcatctcgg ccgaggtgcc ggaggcgcgg atggtgccgg cctccaggag gtaggcgcgg
     2881 tcgaccaccc gcagcacctg ctggacgttc tgctcgacga tcagcactgt gaggccgccg
     2941 gcgcggatgc gcttcagcag ctcgaacacc tgctggacca cgaccggcgc cagcccggct
     3001 gacggctcgt cgagcagcag cagccgggga tcgctcatca gcgcgcggcc gatggcgcac
     3061 atctgctgct cgccgcccga catggtgccg gcgaactggc gccgccgctc cttgaggcgc
     3121 ggaaagaggg tgaacaccac ctccagccgt tcgccgtact tggcgcgcgc ctgcggcatg
     3181 aaggcgccca tcttgaggtt gtcctcgacc gtgagccgcg ggaacagccg gcggttctcc
     3241 ggcacgtggg cgatgccgag gccgacgatg cggtgcgccg ccgtcgccac gacatcggtg
     3301 ccctccatcg cgatggcgcc gcggctcggc cggatcaggc ccgagatcac ccgcatcagc
     3361 gtagtcttgc cagcgccatt gggtccgatc acgcccaccg cctcgcccgc cttgacctcg
     3421 agactgacgc cgaacagcgc ctggaaggtt ccgtagccag cgtcgaccga tctcagttcg
     3481 agcatcaccg gtaccactca gcgccgtgct tcggccgcgg cggcctgggt cgcaacggca
     3541 tcggtgccga gatagacttc gatcacccgg ggatcgttcg acacggcact cggcaggccc
     3601 tcgcagatct tctcgccgtg atcgagcacc atgacgcggt cgaccacgcg catcagcacg
     3661 cccatgatgt gctcgaccca gatgatggtg atgccgagct cgtcgcggat cttgcgcagc
     3721 atgtcggcgg cctggtccat ctcggtctcg tcgaggccgc ccaggctctc gtcggcgagc
     3781 aaaagcttcg gcccggtcgc cagcgccttg gcgagctcga gcttcttcaa gccggcggcg
     3841 cccagcccat cgaccagcgc ctttcggtcg gtcggcaggc cgaccatggc gagcgcgtgt
     3901 tcggccgcct cgttcgcctt ggcggcgctg tggcggccct ggccgtagaa gccggccagc
     3961 gccacgttct cgaacagggt gagccggcgg aacgggcgcg ggatctggaa ggtgcggccg
     4021 atgccgcggt tgatgatgcg atgcggggcg aggccggcga tctcgtggcc ctcgaaggcg
     4081 atcgagcccg ccgagggcgg gaaggttccg gacaggacgt tgaagatcgt gctcttgccc
     4141 gagccgttgg ggccgatcag gccgagaatc tcgccctgat cgaccttgaa cgacaccttg
     4201 ttgacggccg tgaaaccgcc gaaccgcttg accaacccct cgacgaccag cacggcggtg
     4261 tctctctcct gtctccgggc cgcctacttg ttgctgtagg tcgtgccggc cggcagcggc
     4321 agcacggctt cgcgctgcgc ctggctcttg ggccatacca cgtacgactt gtcgtcgacg
     4381 tactggatga taaccgggaa ggcgcggtcg ttctggccgg ccatcgctgc gccctccccc
     4441 tcgaacttca cgccgaagcc cagcatggtg ccgccctcgg caatgtcggt gtcgagcgcg
     4501 gccttgcgca gcgcctccga atcgatgccg ccatatttct tgatggcgcg cggcagcacg
     4561 tcggtcagga agaggaaagt gttggaggcc gccatgccga catgggccga gcggatggcg
     4621 acgcccggct tcaccttgtc gaactcatcg ccgacgaact tgatctccga cggcagcttc
     4681 ggatcgagcg tcttgggatt ggaaagccag atcgagatcg ggtcggcgtt gaagaagtag
     4741 ttgacgtcgg agcccaagcc ctccttcagc ttctcgtaga cgccgtagcc cgcgccatga
     4801 ccgaccagcg cggcgacctt cagcccctgc tcgcgcgcct ggcgcagcaa cagggtgatg
     4861 tcggggttgt agccggtatg gaagatcaca tcgggccggg cgcgcttgag cttggtgacc
     4921 aacgccgaga ggtcgggcgc ggtcgccgaa tagccttcct tgagcacgat attgaagccc
     4981 gccttcttgg cgccagcctc gttgcccttg gcgacgtcga cgccgtaggc gccgtcctcg
     5041 tggatgatgg cgacgcgcag gtccttcgga tccttgccga gcttggcctt ggcgttctgg
     5101 ttgatgaagt ccatggtcat gctaccgaac tgctggccgc tcggctgcgc gcggaagacg
     5161 tatttgagat tgcggttctc cagcacggcc gacgagatgc aggtggtgat ccacatgaac
     5221 ttcttgagct gctcgacccg ggccgccacc ggcacgcact gcgccgagga gtagaagccc
     5281 agcaccatgt cgaccttttc ctgctcgatc aggcggaccg cctcgttgat ggcgacgtcc
     5341 ggcttgctct gggcatcggc atagatcgcc tcgatcttgt agccctcgac tccggtcttg
     5401 gtgaactggt cgagcacgat cttggcgccg atgtattgca gctccgaacc gccgccggcg
     5461 agcgggccgg tcaggtcgta gacgacgccg atcttgagtt tcttatcctg ggcctgggcg
     5521 gtggccacca agccgaaaat tgcaagcgcg gcgactacag ggcccagcaa acgtccgatc
     5581 ctgccattgg ccatgacgct tcctcccgag ttcgacgttt atttcacttt tttgatcgac
     5641 cgcatcacac gggccacgcc gactgatgtc aactcggatt ttcgtcgacc ccggcaatgt
     5701 cgagagtatt tgtggaatcg agtgcacgca gtcgttgcaa actccatcga aatgcgcaat
     5761 ctagtcgccg gggaggattc gcctcatgac agacattgca cagctgacac aactcgggcc
     5821 acgcgtgcgg acgctacgcg cgctcggcat cgatacgatc gagcatttcg ttgccgccac
     5881 ccaagtcgcc ggccccgaac tggccagact gctcggcggc aatctcgatg ccctggtcgc
     5941 accggcgatg gcgatggcgc aggccatgag cgccgaggtc gaaaccgagc tcgtcgctct
     6001 tccctgttcc ctcggcgcgc ggaccgacga catcacgcca atcaccgaga ccgttccggc
     6061 actcgccctc gatattcccg tcggtgcgtg tggaccgccc ctcatcacgc ccgccattcc
     6121 gattcgcaat caacagttcc ggggcacctg tgtggcccat tccgtcgtcg cggccctcga
     6181 atattggttg gacagcagcg gcagctatca ggatatgtcc gaacagttcc tttattggaa
     6241 ttgcaagaac aacgacggcg cgccgacgca gccaggcacc tggattcgcg tcgcagcgcc
     6301 gctggtacag cgcgacggcg tctgtcccga aggcatctgg ccgtacaatc ccaacccgat
     6361 tccgggcaac gaggcgcaaa acccggtgcc gatgggcgcc cagcggcagg cactgccata
     6421 tcgagtgccc gtggtgaccg cgctgccggc aacctcgatc agcgactaca agaccgcgct
     6481 tgcttcgcaa cgctgggtgc cgttttccat cccggtctat aattcatggt accagagcag
     6541 ccaggtccgc ctcacgggcg acatcaccaa cccgattccc ggcgaaacgc gggtcggcgg
     6601 ccacgccatg tgcatcgtcg gctgcatcga ccagccagaa cggccagaac tagggggcgg
     6661 ccggttcatc ctgcgcaata gttggggcac gggctggggg caaacttcgc cctacggctc
     6721 tggctacggg acgatcccgt acatatatat tcagcgcttc ggcatggagg cctatacact
     6781 gggctagcgc tgccggcgga cacgtcggcc acgcgggttg agggcgatat catggctggc
     6841 tccggtccgc cgacctacat ttcagcgctg cagatcgggc ccgaggaggc agcgaagctg
     6901 cgcgcgctcg gcgccgacac cccgcagcaa ttgctggcgc agatcagggc cgctcccgcc
     6961 gcgttcaccc gttacctcgg cacggagact gcccggcgca tcgaacgggc actgagcgcc
     7021 atggtgccat ccgacgaacc gacgcagccg atccctccac ccggccaact cggcgttccg
     7081 ctgggtcccg ccccatccaa cgtcgccgat tccaaggtcg acctcgcgcg tcgggatgaa
     7141 ctcttcaatc gcatccagcg gctgaaggca gagcacgctc cagcccatca agtagaggct
     7201 gccgagcgcg cactcgatga cttgttccag cggtcgagct aacggccggc gcccgccgtc
     7261 agcacgtcga acatcaagcc ggacggctgg tcgaacatcg cgaacagcgc cgccagccgc
     7321 gacggatcgc ccgcgatcct gagcgtgccc gcggtcatcg cttcgggggc ggtggtcttg
     7381 cccagcacca tggcatcgag cgtatcgcgc gtggtggtga tcgacgccgc ggccgcgtcc
     7441 gaccattcgc ccaggcggtg gctcaaggtg cagcgcttca gggtgagcag aagcttctcg
     7501 gcgcggtcgg tgaagtgcca gttgatggtc atcgactggc cggccgcttt cgccggatcg
     7561 aggcggatcg ccagcaggtc gaagaacatg tcgctggtga gcccggccag ggtgtcggca
     7621 cccatcgcca tccgcgccgc cagcgggaac acaccatggc gcagctcctg ggcgccgtac
     7681 aggaaggcgt tgcgccaggt cgccgactcg gcctggtagc ccatctgctc cagcgcgtcg
     7741 gcgcagagcg cgcgcgcctc gatgttgttg ggctcggcgt agacgacctc cttcatcact
     7801 tgcgccaccc agcggtactg gcccttggcg aaatcggacc gggcgcgggc gatgacggcg
     7861 gccgcgccgc ccatgtactc gacgaacttg gcggcggccg gcgccggcgg cagcggatgg
     7921 aggttgcatg ggttgccgtc gtaccagctg agatagcgct ggtagaccgc cttcacgttg
     7981 tggctgaccg agccgtagta gccgcgcgcc gaccagcgct cggccaggcc cggcggcagg
     8041 tcgatcgcct cggcgatctc ggccggccgc cagcccttgt tcatgtagcg cagggtctgg
     8101 tcgtggatgt gcttgtaaag gtcgcgctgc gcctcgagat ggtcgagcac cgcttccctg
     8161 ccccaggtcg gccaatggtg ctggccgatc aggatctcgg tatgcggcgc gtagagcgcg
     8221 atcgcatcgc cgatgtattt cgcccagatg cgcggatcgc gcgccaccgc gccacgcagc
     8281 gggatgaagt tgtgcagcac cgggcaggcg ttctccgcca tgttgagcac gcccagctcg
     8341 ggatagaaca tatgcatctc ggccggcgcc tcggtctcgg gcgccagctg gaagacgatc
     8401 cgcacgccgt cgatcgtgtg ctcctcgacc ggctggacga tgctgcgggt cggcgcgatc
     8461 aggcccggcg tgccacgcgc caccgatttg cccagcccgg catcgacctg gccgcgcgcg
     8521 ccgcgcggca gcagggtgcc gaactggaac tgggcgcggc gcgccatcgg caggccagcc
     8581 agcacgttct cgcccgacac cgcctgcatg aatccgtccg gcgcgatgac cgggatcctg
     8641 ccggatttga cgtcggcctc gtcgatcacg ccgcgcacgc cgccatagtg gtcgatgtgg
     8701 ctgtgggtgt agatcaccgc gacgaccggc ttgttcggcc gatgcgcgcg gtagtgcgcg
     8761 agcgcggcac gcgccacttc ggcggtggtc agcggatcga tcacgatcac gccgctgtcg
     8821 ccctcgatca ccgtcatgtt ggagatgtcg aagccgcgca gctggtagag acggtcggtg
     8881 accttgaaca ggccgttggc gaggttgagc cgcgccatgc gccacaggct gggattgacc
     8941 gtggccggcg ccagctcgcc gtcgatgaag gcgtactcac tcaaattcca cagcaccgtg
     9001 ccgttggccg cgcgcaccat gccgtcgggc accggcgcaa tcaggccgcg cttggccgcc
     9061 tggaaatcgg cgacatcgcc gaacggcagc cgggcggcca tcgccgcatg ggccgccttg
     9121 gtcgcaggct cggcatcgcg cgcgacgtcg aggtgcgacg ccggcaccgg aacggctgat
     9181 gctgatgcca ttttctttcc cttcgtcctc ccgtcgcggc actctgcggc tcggccatgg
     9241 ccccacgcaa gctctccctc accgcgatcc ggcgcgcggt cagcaccctg ccgggcgtcg
     9301 aagaaggcac gtcctacggc acgcccgctt ggcgtcaccg cggcaagcta ttggcgcgct
     9361 tgcatcggga cggagagtcg atcgtgctga aagtcggcaa cgagacgcgc gatcacctgc
     9421 tgcaggccga ttcgcagacc ttcttcatca ccgatcacta cgtcggctat ccgacggtgc
     9481 tggctcggct cgaccgattg agtgccgccg acctgaaaaa gcttctggct cgggcgatgg
     9541 tgacgaaggc aaaggtgtca tcccgaggcc gaaggccgag ggacctttaa ggccacagga
     9601 aaggtccctc gctgcgctcg ggatgacagc gtttgcttga cgcctactgt gcgtcctaac
     9661 cctcgacctt gatgttgttg tccttgacca ccttggtcca gcgctcggtc tcgaacttga
     9721 gcttgtcgag gtaggcctcg ggcgtgctgc cggtggtgaa gtagccgagc tcggcgaatt
     9781 tcttctgcac ctcggggtcg ccgatgattt gacgggcgag cgcgttcaat cgatcgacca
     9841 ccggacgcgg cacgccggcc ggcgccacca ggccgaagaa caccgcgctc tccatgtccg
     9901 gcatgccgag ttcgatcacc gtcggaacat cggggcacat cggcgagcgc tcgcgggacg
     9961 caacgaccag ccccttcatc cggccggcct tgacgtggtt gccggtcggc aagacgacgt
    10021 cgcagatcat cggcacgtgg ccggccagca cgtcgcggat cgcgtcggcc gaacccttgt
    10081 agccgacgac ctccatgttg agcttgttgc gggtcttgaa cagctcgcac cacaggtgcg
    10141 gctgattgcc gatgcccgac gtcgcgaacc gcgtcttctg cggctgcttg ttcacccact
    10201 cggcgaattc ggcatagctg cgtgccggca catcgttgtt gtaggcgatc aggtcgggaa
    10261 tgtcggccag agtcgagatc ggctggaagt ccttcagcgg atcgtaaggc tgcttcaggc
    10321 cgagcgcggc attggtcgcc aaggtcgtgg tgccgagcag caaggtgtgg ccatcgggct
    10381 tggacttggc gaccagctcc atgccgatga tggtgttgcc accgccgcgg ttctcgacga
    10441 tcacctgctg gcccagcggc gcggtcatct tctcggcgac gatgcggccc gccgtgtcgg
    10501 tggcgccgcc gggaatgtag ggcaccacga tcttgatcgg ctggctgggc caggtctggg
    10561 cgcgtaccgc ctgtgcgcca acgatggtcc agccggcggc acccgccagc acgctgcgtc
    10621 gcttgagcat gcttcctccc gaaagacccg cagtctactc cgcgggcttg agggaagcct
    10681 tgcccatctc gtgttccgcc ggcaagagcg agatggcggc gaaaccgcag aacgcaacgc
    10741 ccgccagcac catcagaacc accgggaagc ccgccgcctt caccatcggg ccgatcagcg
    10801 ccaccacgat ggagctgacg ccgaaaccga tcgccagccg cgcgccggtg acccggctgc
    10861 gcatgcggtc gtcgatatac ttcacgatca tggcgtcggt gaacgggatg gcgccgaaca
    10921 ccagcagcat gaagccgatc gccgtcgcga acagcgccca gtcttcgacc tgcgaggcga
    10981 tcaggaacaa cggcacctgc aggagcacga tgggcaggta gatgttcttg agcgggaagc
    11041 ggtctatcag cttgccgacc acgagctgcg ccagcgaggc cagcgagaag atcacgaaca
    11101 gcatggctgc cagctcggcc gggtcctgca ccgcgccttt cacccgctcg cgcaaaagct
    11161 cgccgttccc gttggtcgtg aagttgaaga tgatgctgcc ggtcacggcg gtgaaggtca
    11221 tgatggcgaa cacgcgcgcc atcacccgtg gcggcagatc gatcatcttg ggctggcgct
    11281 tggcgggcgc ttcggcttcg cgcggcacca gcaggacgaa ggccgcggcg cagacgagag
    11341 agatcacgcc gggcaggacg aacgccatct gccagccgaa gcgctgggcg atatagaccg
    11401 agacgccggc ggcaatggcg atgcccatgt tgccggccag cccgttga
//
LOCUS       DASWGA010000752         3045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1478559, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000752 DASWGA010000000
VERSION     DASWGA010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1478559"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="VF991_17575"
     CDS             <1..709
                     /locus_tag="VF991_17575"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX9558308.1"
                     /translation="VGTAPIDYCTGSFCAAGIAFALLGRHKTGRGQGLDLSLFDVGMH
                     MMSHWITNYGLKGENPVRMGTGNSLIFPLRVFPTRTRVFVAGTNDPFWRIFCTALGRQ
                     DWLADQRFATNEGRVTHRSALAPMIEAHFAKHTAEELLDKLIPAGMPCSAAYKVSDVM
                     QSPHAKARGSVLEVDYPGIGPVKSAANPIKLSDAPVETRLKSPMVGEHTVEIMREVGF
                     SDAEIAALRDAKAVATP"
     gene            828..2549
                     /gene="poxB"
                     /locus_tag="VF991_17580"
     CDS             828..2549
                     /gene="poxB"
                     /locus_tag="VF991_17580"
                     /EC_number="1.2.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0052737 - pyruvate dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HEX9558309.1"
                     /translation="MARTIADLMAETLNVAGVKRIYGVVGDSLNGFTDSLRKQKKIDW
                     IHMRHEESAAFAAGAEAHLSGELAVCAGSCGPGNLHLINGLFDCHRSRVPVLAIAAHI
                     PSAEIGGSYFQATHPEQLFAECAHYVELVSNADQMPRIFEKAIRIAIARRGVSVVVIP
                     GDIALLATDAKAASWLAPKPPVVRPSDAEVDALAKLLDDGERITMMCGAGCAGAHGGI
                     VELAGKLNAPIVHSLRGKEHVEYDNPFDVGMTGLIGFASGYAAMKSCDTLLLLGTDFP
                     YRQFYPEGAKVAQVDIRSESLGNRCHLALGVVGDVATTVAALLPKLKKKTDRKYLDAA
                     LAHYKKAREDLDKLAEGKPGGKIIHPQYLSRLVSEIADDDAVFTCDVGTPTVWAARYL
                     KMNGKRRLIGSFNHGSMANALLQAIGAQATYPQRQVISLSGDGGFSMMMGDFISLSQL
                     GLPVKVIVLNNGTLGFVEMEMKASGFLDTGCDLKNPNFAAMAEAMGIKGVRVEDPQKL
                     EGAVREVLAHKGPALLDVVSARQELAMPPKATLEQAFGFSLFMAKAVMDGRTTQIIDL
                     ARTNLRI"
     gene            2612..>3045
                     /locus_tag="VF991_17585"
     CDS             2612..>3045
                     /locus_tag="VF991_17585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9558310.1"
                     /translation="MADGIFAGLQVIDCASWIAGPAAATILSDFGAKVIKIEPPEAGD
                     PWRASTPVPGKITDYWWQLTARNKQSLAIDLKHPEGLGVLHRLLGSTDVFITNFPLPV
                     RERLKIAAADLLAINPRLVYGSITAYGEAGEEAARTGFDATA"
BASE COUNT          545 a         1026 c          975 g          499 t
ORIGIN      
        1 cgtcggcacg gcgccgatcg actactgcac cggctcgttc tgtgccgccg gcatcgcctt
       61 cgccctgctc ggccggcaca agaccgggcg cggccaggga ctcgacctgt cgctgttcga
      121 tgtcggcatg cacatgatga gtcattggat caccaactac gggctgaaag gcgagaatcc
      181 ggtgcgcatg ggcacgggca actcgctgat ctttcccctg cgcgtcttcc cgaccaggac
      241 gcgagtcttc gttgccggca ccaacgatcc cttctggcgc atcttctgca ccgcgcttgg
      301 ccggcaggac tggctcgccg accagcgctt tgccacgaac gaaggccgcg tcacccatcg
      361 ctctgccctc gcaccgatga tcgaggcgca cttcgccaag cacaccgccg aagagctttt
      421 ggacaagctg atccccgccg gcatgccgtg ctcggccgcc tacaaggtga gcgacgtcat
      481 gcaaagcccg cacgccaagg cgcgcggcag cgtgctggag gtcgattatc ccggcatcgg
      541 cccggtgaag tcggcggcca atccgataaa actttccgac gcgccggtcg agacgcgcct
      601 gaaatcgccg atggtgggcg agcacacggt cgagatcatg cgcgaggtgg gttttagcga
      661 cgccgagatc gccgcattgc gcgacgccaa ggccgtcgcc acgccatgaa ggtcgggcct
      721 ccaggcgcat gtgaatgcgc cgagtccggc acgagatgat cgcgagcttc gctcacggca
      781 cacagcgtgg catagtcccg ctcccaacca acctcatgga gcttcacatg gcgcgcacca
      841 tcgccgacct gatggccgag accttgaacg tcgccggcgt gaagcgaatc tacggcgtgg
      901 tcggcgattc gctgaacggc ttcaccgatt cgctgcgcaa gcagaagaag atcgattgga
      961 tccatatgcg gcacgaagag tcggccgcct tcgccgccgg cgccgaggcc catctgagcg
     1021 gcgagctcgc ggtctgcgcc ggcagctgcg gccctggcaa cctgcacttg atcaacggcc
     1081 tgttcgattg ccatcgcagc cgcgtgccgg tgctggcgat cgccgcccat atcccgagcg
     1141 ccgagatcgg cggctcctat ttccaggcga cgcatcccga gcagctgttc gccgagtgtg
     1201 cgcactatgt cgagctggtc tccaacgctg accagatgcc gcgcatcttc gagaaggcga
     1261 tccgcatcgc catcgcccgg cgcggcgtgt cggtggtggt catccccggc gacatcgcgc
     1321 ttttagcaac cgacgccaag gcggcgagct ggctcgcgcc caagccgccg gtggttcggc
     1381 cgtccgacgc cgaggtcgac gccctggcca agctcctgga cgacggcgaa cgcatcacca
     1441 tgatgtgcgg cgcgggctgt gccggcgccc atggcgggat cgtcgagctg gccggcaagc
     1501 tcaacgcgcc gatcgtgcac tcgctgcgcg gcaaggagca tgtcgaatac gacaacccgt
     1561 tcgatgtcgg catgaccggc ctgatcggtt ttgcctcggg ctacgcggcg atgaagagct
     1621 gcgacacgct gctgctgctg ggcaccgact tcccctaccg gcagttctat cccgaaggcg
     1681 ccaaagtcgc tcaggtcgac atccggtccg aaagcctcgg caatcgctgt catctcgcgc
     1741 tgggcgtggt gggcgatgtc gcaacgacgg tcgccgccct gctgcccaag ctcaaaaaga
     1801 aaaccgaccg caagtatctc gatgcagcgc tcgcccacta caaaaaagcg cgcgaggatc
     1861 tcgacaagct cgccgagggc aagccgggcg gcaagatcat ccatccccag tatctgtcgc
     1921 gcctggtcag cgagatcgcc gacgatgacg ccgtcttcac ctgcgacgtc ggcacgccga
     1981 ccgtgtgggc ggcgcgctac ctcaagatga acggcaagcg ccgcctgatc ggctcgttca
     2041 atcacggctc gatggccaat gcgctgttgc aggcgatcgg cgcccaggcg acctatcccc
     2101 agcgccaggt gatctcgctg tcaggcgacg gcggcttctc gatgatgatg ggcgacttca
     2161 tcagcctcag ccagctcggc ctgccggtga aggtgatcgt gctcaacaac ggcaccctgg
     2221 gcttcgtcga gatggagatg aaagcgagcg gctttttgga caccggctgc gacctcaaga
     2281 accccaactt cgccgccatg gccgaggcga tgggcatcaa gggcgtgcgg gtcgaggatc
     2341 cgcagaagct cgagggcgcg gtgcgcgagg tactggcgca caagggcccg gcgctgctcg
     2401 atgtggtgag cgcgcgccag gagctcgcca tgccgcccaa ggcgactctc gagcaggcgt
     2461 tcggtttcag cctgttcatg gccaaggcgg tgatggacgg gcgcaccacc cagatcatcg
     2521 acctggcgcg caccaatctc aggatctgag ggcggcggtc atgagcaggc cacgaatggc
     2581 atgattgctc cctcaacagg ggtaacgtcg gatggctgat ggaatatttg caggtctgca
     2641 ggtcatcgat tgcgcgagct ggatcgccgg tccggcggcg gcaaccatcc tctcggactt
     2701 cggcgccaag gtgatcaaga tcgagccgcc ggaggccggc gatccgtggc gggcgtcgac
     2761 cccggtcccc ggcaagatca cggactactg gtggcagttg acggcccgca acaagcagag
     2821 cctggccatc gatctcaagc accccgaggg acttggcgtt ctgcaccgcc tgctcggctc
     2881 gaccgacgtc ttcatcacca acttcccctt gccggtgcgc gagcgcctga agatcgccgc
     2941 cgcggacctg ctcgcgatca acccgcgact cgtctacggc tcgatcacgg cctatggcga
     3001 ggccggcgag gaggcagccc ggacaggctt cgacgcgacc gccta
//
LOCUS       DASWGA010000753         5753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1100374, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000753 DASWGA010000000
VERSION     DASWGA010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5753
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1100374"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..901
                     /locus_tag="VF991_17590"
     CDS             215..901
                     /locus_tag="VF991_17590"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HEX9558311.1"
                     /translation="MKLDRRTVLSGTAAAFAAPLLASLPARADAKRQSLVDSCLESAR
                     KVLGGPDFPDAAKVMTNARGVLIIPELVQGGFIVGAAGGRGALMARTGPNNWSPPAFY
                     GLGSGSLGLQIGAKVSEIVFIIRTERGLNAILDHKFKFGAEAGVTLVAVGIGLEGAST
                     SAMGADIVAFANSAGLFAGVSLEGSYLDADNDWNALYYGQGASAKAIVLDRRFTNPGA
                     EPIRQYLAKW"
     gene            complement(1006..1401)
                     /locus_tag="VF991_17595"
     CDS             complement(1006..1401)
                     /locus_tag="VF991_17595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558312.1"
                     /translation="MAGISAMPIASVEGVQSTDDGLHALLKAKVAEGEMVLAFPEGQL
                     RPLLDLVCVAIAETSKKLERHETAVFPVSWWEFGQTADGLLAVTFRLGNGASLSFQLA
                     ADQIPHMRQTLEVMEGRQLPDRPSKTRPN"
     gene            complement(1538..1975)
                     /locus_tag="VF991_17600"
     CDS             complement(1538..1975)
                     /locus_tag="VF991_17600"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9558313.1"
                     /translation="MRRIATAVDIDATPLAVWRLLVDFAAYPEWNPFIRRIDGEPKVG
                     AKLRVTIQPPGHKPMTFRPTVVIAEPDHELRWLGRVLMPGIFDGEHAFIIEDKAGSCR
                     LRQEESFRGLLVPAFGGMLADTERGFAALNAALKRRAEGKAQR"
     gene            complement(1979..2644)
                     /locus_tag="VF991_17605"
     CDS             complement(1979..2644)
                     /locus_tag="VF991_17605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit B"
                     /protein_id="HEX9558314.1"
                     /translation="MAWTRDQMAARAAQELKDGYYVNLGIGIPTLVSNYVPEDVDITL
                     QSENGMLGVGPFPLDNEVDPDIINAGKQTVTELKGTSYFSSADSFGMIRGGHIDLSIL
                     GAMEVAENGDLANWMIPGKMVKGMGGAMDLVAGVRKVIVTMEHVSKDGASKLLKECTL
                     PLTGRRVVDMVISELGVFSVDKTGDGGVTLIELADGVTVEEVKAKTKAKLSVAPDLKE
                     KAA"
     gene            complement(2654..3355)
                     /locus_tag="VF991_17610"
     CDS             complement(2654..3355)
                     /locus_tag="VF991_17610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HEX9558315.1"
                     /translation="MANKVYKDAKSALEGVLHDGMMVMCGGFGLVGIPDKLIHAVRDS
                     GVKDLTCVSNNAGIDGEGLGLLLETGQVKKMISSYVGENKTFAKLYLEGKLEIEFNPQ
                     GTLAERCRAGGAGIPAFYTKTGVGTEVAKGKETKVFDGHEYVMERGLFGDLALVKAWK
                     GDAVGNLVYRKAARNFNPMMATAAKMCVAEVEELVPVGAIDPDHVHTPGIFVKRIFCG
                     APYDKKIEQRTTRKA"
     gene            complement(3549..>5753)
                     /locus_tag="VF991_17615"
     CDS             complement(3549..>5753)
                     /locus_tag="VF991_17615"
                     /inference="COORDINATES: protein motif:HMM:NF013784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HEX9558316.1"
                     /translation="RISGIGLRGVQEKIALQHISAFDEDVVTLPIGGFYKMRLGGDRH
                     NFEGNLIHMLQDAVATESYAKYRKYSEQVRRLPPINLRDLLDFKTDRTPVAIDEVESI
                     TELRKHLVAPGISLGALGPEAHETLSIAMNRIGAKSDSGEGGEDPARYKARSNGDNAS
                     SAIKQVASGRFGVTAEYLNNCRELEIIVAQGAKPGEGGQLPGAKVSEMIARLRHSTPG
                     VSLISPPPHHDIYSIEDLAQLIYDLKQINPEARVTVKLVARSGIGTIAAGVAEAKADV
                     ILVSGHSGGTGASPQTGIKYAGIPWEMGLSETHQVLTLNRLRDKVLLRTDGGIKTGRD
                     VVIAALLGAEEYGIGTASLIAMGCIMVRQCHSNTCPVGVCTQDPKLRAKFAGSPEKVV
                     NLFSFIAEEVREILAQLGYRSLIEIVGRSDLLKQVSRGARYLDDLDLNPLLSRADGGR
                     EAVHCTVKGRNEVPDTLDAQMIRDAQPLFAHREKMQLQYSVRNTHRAVGTRLAAMITR
                     KYGMDGLQPDTVTVRLRGTAGQSLGAFAVQGMKLEVFGDANDYVGKGLSGGTIVVKPT
                     VSSPLVPEANAIIGNTVLYGATAGKLFASGRAGERFAVRNSGADTVVEGVGSNGCEYM
                     TGGTAVILGSIGVNFAAGMTGGMAFVYDPEDVFALKVNPETVTFQRIDHPHWEAALKA
                     LVEEHVAETKSPLGARLLNDWNRQLERFWQVVPKEMLSRLPQPLTTAEAKRA"
BASE COUNT          919 a         1926 c         1850 g         1058 t
ORIGIN      
        1 catgcggatc gccgagtgtg ccgaccgggt aatcctgatg gcggcgggcc tcccgctcac
       61 catgaaggac cgcccgtcgc gctcccagcc atgagtccat ccgagggcaa caggccctac
      121 cgccccaatt ccgcccggaa ccgtggtatt attccgcacg caatggccgc caaggcgctt
      181 ccccggcgcc ggccatgagc caaaggagca gaaaatgaag ctcgatcgcc gaaccgtcct
      241 ttccgggact gcggctgctt tcgccgcccc ccttctcgcc tccctgccgg cccgcgccga
      301 cgccaagcgc cagtcgctgg tcgattcttg cctcgaatcc gcccgcaagg ttttaggcgg
      361 cccggacttc cccgacgccg ccaaggtcat gaccaacgcc cgtggcgtgc tgatcattcc
      421 cgagctggtg cagggcggct tcatcgtcgg cgccgccggc gggcgcggcg cgctgatggc
      481 gcgcaccggc cccaacaact ggagtccgcc cgccttctac ggcctgggct cgggcagcct
      541 cggcctgcag atcggcgcca aggtgtcgga gatcgtgttc atcatccgca ccgaaagggg
      601 tttgaacgcc atcctcgacc acaagttcaa gtttggcgcc gaggcgggcg tcaccctggt
      661 cgcggtcggc atcggcctgg agggcgcctc gacatcggcc atgggcgccg acatcgtggc
      721 cttcgcgaac tccgcaggcc tgttcgccgg cgtctcgctc gaaggctcct atctcgacgc
      781 cgacaacgac tggaacgcgc tctactacgg tcagggcgcc agcgcgaaag ccatcgtgct
      841 cgaccggcgc ttcaccaatc cgggcgccga gccgatcagg cagtatctcg cgaagtggtg
      901 aagcagcggc gatactgtct cggcagccgt gcgatctgtg ggagcgtgtc gcacgtcaac
      961 tcagaatcca attgaggtgc gcccttctgc cgatcttcag gactctcagt ttggccgtgt
     1021 cttcgacggc ctgtccggca attgccgccc ctccattact tcaagcgtct gcctcatgtg
     1081 tgggatttgg tccgcggcca gttgaaacga caaagaggcg ccgtttccaa gccgaaacgt
     1141 caccgccagc aagccgtccg ccgtctgtcc aaattcccac cacgacaccg ggaagaccgc
     1201 tgtttcgtgt cgttccagtt tcttggatgt ctccgcaatc gccacacaaa ccagatcaag
     1261 tagaggacgc aactgacctt cagggaaggc cagtaccatc tctccctcgg caaccttagc
     1321 cttgaggagg gcatgtaggc cgtcgtcggt agattgaacg ccctctactg aggcgattgg
     1381 cattgcggaa ataccggcca tctaactttc ccctctccct tatgcccggg taagcaaggg
     1441 caagcttctc gcgctgtcgt atgggcgcgg cgctggcagg tcaacccggc cttggcgggg
     1501 cgtgaagggg tggcggaaag ggcgcaaacc tcctgcttca gcgctgagct ttgccctcgg
     1561 cgcgccgttt caacgcggcg ttgagcgcgg caaatccccg ttccgtgtcg gccagcatgc
     1621 cgccaaacgc cggaacgaga agaccgcgga agctctcctc ctggcgcagc cggcagctgc
     1681 ccgctttatc ttcgatgatg aaggcatgct cgccgtcgaa aatgccgggc atcagcacgc
     1741 ggccgagcca gcgcagttcg tggtcgggct cggcgataac aacggtggga cggaatgtca
     1801 tcggcttgtg gcccggcggc tggatcgtca cccgcagctt ggccccgacc ttgggctcgc
     1861 cgtcgatgcg gcggatgaac gggttccatt cgggataggc ggcaaagtcg accaggaggc
     1921 gccagaccgc gagcggcgtc gcgtcgatgt cgacggccgt cgcgatgcgg cgcacgggtc
     1981 aggccgcctt ttccttcaaa tcaggcgcga ccgaaagctt ggccttggtc ttggccttga
     2041 cctcctcgac ggtgacgccg tcggcgagct cgatcagggt gacgccgcca tcgcccgtct
     2101 tgtcgacgct gaagacgccg agctcggaga tcaccatgtc gaccacccgc cgcccggtca
     2161 gcggcagggt gcattccttc aggagcttgg aggcgccatc cttggagacg tgctccatgg
     2221 tgacgatcac cttgcgcacg ccggccacga gatccatggc gccgcccatg cccttgacca
     2281 tcttgcccgg gatcatccag ttggcgaggt cgccgttctc ggccacttcc atggcgccca
     2341 ggatggaaag gtcgatgtgg ccgccgcgga tcatgccgaa gctgtcggcc gaggagaaat
     2401 acgacgtgcc cttgagctcg gtcacggtct gcttgccggc attgatgatg tcggggtcga
     2461 cctcgttgtc gagcgggaag gggccgacgc ccagcatgcc gttctcgctc tgcagggtga
     2521 tgtcgacatc ctcgggcacg tagttcgaca ccagggtcgg gatgccgatg cccaggttca
     2581 cgtagtagcc gtccttcaac tcctgggcgg cgcgcgccgc catctgatcg cgggtccagg
     2641 ccatgctcgt ctcctaagcc ttgcgggtgg tgcgctgttc gatcttcttg tcgtagggcg
     2701 ccccgcagaa gatgcgcttc acaaaaatgc cgggcgtgtg gacgtggtcg ggatcgatcg
     2761 cgcccaccgg caccagctcc tcgacctcgg cgacgcacat ctttgccgcc gtcgccatca
     2821 tcggattgaa gtttctcgcc gccttgcgat agacgaggtt gccgacggca tcgcccttcc
     2881 acgctttcac gagggcgaga tcgccgaaca ggccgcgctc catgacgtat tcatggccgt
     2941 cgaacacctt ggtctccttg cccttggcga cctcggtgcc gacgccggtc ttggtgtaga
     3001 aggcggggat ccccgcgccg ccggcgcggc aacgctcggc cagggtgccc tgcgggttga
     3061 actcgatctc gagcttgccc tcgaggtaga gcttggcgaa ggtcttgttc tcgccgacat
     3121 aggacgagat cattttcttc acctggccgg tctccagcag caggccgagc ccttcgccgt
     3181 cgatgccggc attattgctg acgcaggtca ggtccttgac gcccgaatcg cgcaccgcgt
     3241 ggatcagctt gtcgggaatg ccgaccagac cgaagccgcc gcacatcacc atcatgccgt
     3301 catgcaacac gccctcgagc gccgacttgg catccttgta gaccttgttc gccatcgatc
     3361 cgttcctgca agagccctac cgaccgcata tgcgggagac gatagaagac tgtcaacgcg
     3421 atctgtcgaa gatgacaatt gcgataccgc ctatcaccag cgcggttccc agcatcaggg
     3481 cggagcgcgg acctccaggt ccgctcatgc tcatgatgcg gacctggagg tccgcgctcc
     3541 aattgacatt acgcccgttt ggcttccgcc gtcgtcagcg gctgcggcag gcgcgacagc
     3601 atctccttgg gcacgacctg ccagaaccgt tcgagttgtc ggttccagtc attcagcagg
     3661 cgcgcgccga gcggcgactt ggtctcggcg acatgctcct cgaccagcgc cttcagcgcc
     3721 gcctcccaat gcggatggtc gatgcgctgg aaagtcaccg tctcgggatt gacttttagc
     3781 gcgaagacat cctccgggtc gtagacgaag gccatgccgc ccgtcatgcc ggcggcgaag
     3841 ttgacgccga tcgagcccag gatgacggcg gtgccgccgg tcatgtactc gcaaccgttg
     3901 gagcccacgc cttcgaccac cgtgtcggcg cccgagttgc gcacggcaaa gcgctcgccg
     3961 gcgcgacccg aggcgaacag cttgccggcg gtggcgccgt agaggacggt gttgccgatg
     4021 atggcgttgg cttccggcac cagcgggctc gacacggtgg gcttcaccac gatggtgccg
     4081 ccgctcagcc ccttgccgac atagtcgttg gcgtcgccga acacttcgag cttcatgccc
     4141 tgtaccgcga aggcgccgag cgactggccg gcggtgccgc gcaggcgcac ggtcacggtg
     4201 tcgggctgca ggccgtccat gccgtacttg cgcgtgatca tggcggcgag ccgggtgccc
     4261 acggcgcggt gcgtgttgcg cacgctgtac tgcaattgca tcttctcgcg gtgggcgaac
     4321 agcggctggg cgtcgcggat catctgggcg tcgagcgtgt cgggcacctc gttgcggccc
     4381 ttgaccgtgc agtgcaccgc ctcgcgaccg ccgtcggcgc ggctgagcag cggattgagg
     4441 tcgagatcgt cgagatagcg cgcgccgcgg cttacctgct tcaacaggtc ggagcggccg
     4501 acgatctcga tcagcgagcg gtaaccgagc tgggccaaaa tctcgcgcac ctcctcggcg
     4561 atgaagctga agagattgac caccttctcc ggtgagccgg cgaacttggc gcgcagcttg
     4621 gggtcctgcg tgcacacgcc gaccgggcag gtgttggaat ggcactgccg caccatgatg
     4681 cagcccatgg cgatcagcga ggccgtgccg atgccgtact cctcggcgcc cagcagggcg
     4741 gcgatcacca cgtcgcggcc ggtcttgatg ccgccgtcgg tgcgcagcag caccttgtcg
     4801 cgcagccggt tcagcgtcag cacctgatgc gtctccgaca ggcccatctc ccacgggatg
     4861 ccggcatact tgatgccggt ctgcggcgag gcgccggtgc cgccgctatg gcccgacacc
     4921 aggatgacgt cggccttggc ctcggcgacg ccggccgcga tggtgccgat gcccgagcgg
     4981 gcgaccagct tcaccgtcac ccgcgcctcg gggttgatct gcttcaggtc atagatcagc
     5041 tgcgccaggt cctcgatcga atagatgtcg tggtgcggcg gcgggcttat caggctgacg
     5101 ccgggcgtcg aatggcgcag ccgggcgatc atctcgctca ccttggcgcc gggcagctgc
     5161 ccgccttcgc cgggcttggc gccttgcgcc actatgatct cgagctcgcg gcagttgttg
     5221 agatattccg ccgtgacgcc gaagcgaccc gatgccacct gcttgatggc cgacgaggcg
     5281 ttgtcgccat tggagcgcgc cttgtagcgc gccggatcct cgccgccttc gcccgaatcc
     5341 gatttggcgc cgatcctgtt catggcgatc gacagcgtct cgtgcgcttc cggcccgagc
     5401 gcccccagcg agatgccggg cgccaccagg tgcttgcgca gctcggtgat cgattcgacc
     5461 tcgtcgatgg ccacgggcgt gcggtcggtc ttgaagtcca gcaggtcgcg caggttgatc
     5521 ggcggcaggc ggcgcacctg ctcgctgtac ttgcggtact tggcgtagga ctcggtggcg
     5581 accgcgtcct gcagcatgtg gatgaggttg ccctcgaagt tgtggcggtc gccgcccagc
     5641 cgcatcttgt agaagccgcc gatcggcagg gtgacgacgt cctcgtcgaa ggcgctgatg
     5701 tgctgcagcg cgatcttctc ctgcacgccg cgcaggccga tgccggagat gcg
//
LOCUS       DASWGA010000754         9362 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1615428, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000754 DASWGA010000000
VERSION     DASWGA010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9362
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1615428"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VF991_17620"
     CDS             complement(<1..329)
                     /locus_tag="VF991_17620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9558317.1"
                     /translation="MLRVRELAAFYGASQALFGMELAVDAGEVVTLMGRNGMGKTTTV
                     NAIMGLLPARRGVVEFEGTRVDHLPSFRIARLGLGLVPEGRQIFPNLSVRENLLASAA
                     NRTLRGNP"
     gene            complement(329..1081)
                     /locus_tag="VF991_17625"
     CDS             complement(329..1081)
                     /locus_tag="VF991_17625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558318.1"
                     /translation="MAEPLLSTDRLIKRFGGLVATDSVSIDVKPGEIHALIGPNGAGK
                     TTLVSQLTGNLEPDSGAIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALDNVA
                     LAVQAHAGHSFRFLADARRDERLRGPARQGLADVGLANRADTTAAALSHGEQRQLEIA
                     MALAGDPRLLLLDEPMAGMGVEESQRLIGFLRGFKGRRAMLLIEHDMDAVFQLADRIT
                     VLVYGRAIASGPPGEIRANPEVRQAYLGEETA"
     gene            complement(1074..2042)
                     /locus_tag="VF991_17630"
     CDS             complement(1074..2042)
                     /locus_tag="VF991_17630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9558319.1"
                     /translation="MIASLRTPRGLVTALLLLVLAVLPLLTQAFDQRYLLSIGTRIVI
                     WAIAAISLNMILGYGGLVSFGHAVFFGIGGYAVGILSHHGVQSGSVQWPVGIVAAALW
                     AALIGALSLRTRGLYFIMITLAFAQLVYYVSAGLEAYGADDGLNISRSRFPGLIDLRD
                     KASFYWLCFALLGGTLWFCSRFAISRFGLVIRGAKSNDLRMTALGFPVFRYRLAAFTL
                     SGAFGGLAGILLANEGAYISPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLE
                     ESLPPLLDLGRKGWGEYWQIVFGPMLVLIALYARGGIDSLFGRRHG"
     gene            complement(2039..2953)
                     /locus_tag="VF991_17635"
     CDS             complement(2039..2953)
                     /locus_tag="VF991_17635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9558320.1"
                     /translation="MDYLLLQVLNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYM
                     MGAYIAWTLIGWTDSFMLGALLALPATFLLGVAVEALVMRRLYARDHLDQVLATFGLI
                     LFFNELVRAVWGPAGKSIAVPGFLARTVEILPGVPYPAYRFAIIVAGAAVAALLAWLV
                     ARTRLGMLIRAGASNRRMIGALGVNIELLFTLVFGLGAVFAGLAGLMAAPLSSVKIGM
                     GDDILIVAFVIIVIGGIGSIKGAFVAAMVVGQIDIVGRAFLPDFLKTFLSTSAASSAA
                     PAISQVLIYIVMAGVLVWRPTGLFGQRS"
     gene            complement(3025..4203)
                     /locus_tag="VF991_17640"
     CDS             complement(3025..4203)
                     /locus_tag="VF991_17640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558321.1"
                     /translation="MNGKLLGAATIAALVVGLQPASGQAPIKIGFISTFSGPQAAIGE
                     DMRRSVELAKEHLGGKMGGKPFEIVYEDDQFKPDVGKQKSEKLVQQDKVNVVAGYIWS
                     NVLLASLKTVTDEGDTILISANAGPSQIAGELCNKNFFSTSWQNDQTPMAMGEYLNTK
                     GVKSLYLMGPNYAAGKDMLAGVRRTYKGKLIGEDFTKWPDQLDFSAELAKIAAAKPEG
                     IFIFYPGAHGVQFVKQWAQSGLNKTVPLYQVFSIDAITLPQQGELALGTLGAQEWVND
                     LPNEQNKRYVADFKKKHGVYPSYYGAQSYDAIMLIASAAEALKGDLSSKDKVRAELKK
                     ANFKSLRGGFKYNTNNFPIENFYIQETVKDPQGVMTVKTIATAVKDAKDSYYEKCPMK
                     "
     gene            complement(4251..5801)
                     /locus_tag="VF991_17645"
     CDS             complement(4251..5801)
                     /locus_tag="VF991_17645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013417741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HEX9558322.1"
                     /translation="MTLPSGISFSSDYKVGLPGRFNVAVPFIDRHVGEGRGAKVAIRT
                     ATETVTYAQLAERVNRTGNALLAAGLKPGDRLLMVVKDCPAFFYLFWGAIKAGIVPAP
                     LNTLLRAADYAYLFEDSGCKLVVYSSEFAREVEPALKQVSVKGGTVDAFLAETVKASP
                     ALEARLASPTDDCFWLYSSGSTGRPKGAVHLQRDMVVTSELYGVRALGMREDDVSYSA
                     GKLFFAYGLGNSMTFPLWTGSTAVLDDRRPTPDTVFETIEAFRPTLYYGAPTLYAAQL
                     AALETKPRRFDSIRACVSAAEALPADIFRRWKEKTGTVILDGIGSTECLHIFIGNRLD
                     DYRPGTSGKPVPGYEVKIVDENGKPVAKGESGRLWIRSESAAKYYWNKPEKTAETMVD
                     GWLNTGDTYRQDEDGYFIYDGRSDDMLKVGGIWCSPVEVESCLIGHPAVLEAAVVGHA
                     DENSLIKPKAFVVLKQAGSGGPGLTDELMALCKTTLAPYKYPRWVEYVTELPKTATGK
                     IQRYKLRA"
     gene            5894..6277
                     /locus_tag="VF991_17650"
     CDS             5894..6277
                     /locus_tag="VF991_17650"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9558323.1"
                     /translation="MPVIDYAALPEFPMRAGITGKWIAGHEHGSTSVSVLHNTVEPGV
                     AVPRHFHEYEEVVLVEAGQVWVDLDKVRVTATPGQCVVIPPHTPHAWGAVGPDPVRVV
                     FIWPVLDPFAPGKSTYLEGAPPAVS"
     gene            complement(6286..7251)
                     /locus_tag="VF991_17655"
     CDS             complement(6286..7251)
                     /locus_tag="VF991_17655"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558324.1"
                     /translation="MIARRTVLASAAAFVVARKAAAQQWPARAVKIIVTFPPGGASDA
                     AARVISGPLQEKLGQTVIVDNKPGGGTTIGANFVLAAKDDFHTLMLSNSAPISIAPYL
                     FDKPPYDPLKDFVHVAYIGSVANAFVVRPAVPAKTMPELIAWIKAQNKTVPFGSGGQG
                     SIGHIIGEMFKAELGLNMEHIGYRGAAPMFQDMMADQLDFAVVTLTEVLPLAKDGKLR
                     MIALTSTQKAPSAPEVPLVTELGYPKLVAENFVGLSAPAGFPADAQARLHKATAEVLA
                     DPRIVERLGELGFVTKPMTSAEFTAFVANQVQTFQAPVKASGAKL"
     gene            complement(7306..7659)
                     /locus_tag="VF991_17660"
     CDS             complement(7306..7659)
                     /locus_tag="VF991_17660"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HEX9558325.1"
                     /translation="MPGGISIHVYDVSSGVPAAGLRVELNGPGGKSLASGTIGANGAF
                     DHPTARGEGVVSTGLYEALFHVGDWYRARGVPLPSPAFLEVVPYRFGIADLAQHYHLP
                     LKMTPWGISLFRGGA"
     gene            complement(7659..9077)
                     /gene="boxB"
                     /locus_tag="VF991_17665"
     CDS             complement(7659..9077)
                     /gene="boxB"
                     /locus_tag="VF991_17665"
                     /EC_number="1.14.13.208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA 2,3-epoxidase subunit BoxB"
                     /protein_id="HEX9558326.1"
                     /translation="MAIDYSQLIPNNVDLAGDRRLQRALENWQPRFLDWWKGMGPDGT
                     LNFDVYLRTAISAEANGWANFGYVKMPDYRWGIFLAGRNPNRVIAYGDNKGKPAWQEV
                     PGELRSTLRRLIVTQGDTEPASVEQQRLLGKTAPSLYDLRNLFQVNVEEGRHLWAMVY
                     LLHAYFGRDGREEAEALLERHSGDPDKPRILGAFNEQTPDWLSFFMFTYFTDRDGKYQ
                     LASLAESGFDPLARSCRFMLIEEAHHMFVGESGVQRIVQRTCDLMKEHKTDDARALGA
                     IDLPTIQKYLNFHCSVSLDLFGQEASTNAANYYTMGVKGRYLETRIEDDHVLTDAAFD
                     IDTTDNGRIVRKTVPALQALNERLRQDYLEDCARGLLRWNKAIEQAGIDFELKLPHRA
                     FHRRIGAFSELHVSPDGKVMSEADWKANESKWLPTDEDRAYVTSLMGPAVVEPGKFAH
                     WIAPPARGINGQPADFEYVRFN"
     gene            complement(9088..>9362)
                     /locus_tag="VF991_17670"
     CDS             complement(9088..>9362)
                     /locus_tag="VF991_17670"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700693.1"
                     /note="cleaves the ring of
                     2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming
                     6-hydroxy-3-hexenoyl-CoA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="benzoyl-CoA-dihydrodiol lyase"
                     /protein_id="HEX9558327.1"
                     /translation="GLVTFAPDDIDWEDEVRLAIEERAGFSPDGLIGMEANLRFAGPE
                     TMETKIFARLSAWQNWIFQRPNATGPEGALKLYGTGKQSKFDRKRA"
BASE COUNT         1620 a         2979 c         3203 g         1560 t
ORIGIN      
        1 ggattgccgc gcaatgtgcg gttcgccgcc gacgccagaa ggttctcgcg caccgagagg
       61 ttggggaaga tctgccggcc ctcggggacc agccccagcc ccaggcgggc gatgcggaag
      121 gaaggcaggt ggtcgacccg ggtgccctcg aactccacga cgccgcggcg cgccggcagt
      181 aggcccatga tggcattcac cgttgtcgtc ttgcccatgc cgttgcggcc cattagggtc
      241 acgacctcgc cggcatcgac cgccagttcc atgccgaaca gggcttggct cgcgccatag
      301 aaggccgcca gctcgcgcac gcggagcatc acgccgtctc ctcgccgaga taagcctggc
      361 gcacctccgg attggcgcgg atctcgccgg gcgggccgct ggcgatggcg cggccataga
      421 ccagcacggt gatgcggtca gcgagctgga acaccgcgtc catgtcgtgc tcgatcagga
      481 gcatggcgcg ccttcccttg aagccgcgca aaaagccgat caggcgttgg ctttcctcga
      541 cgcccatgcc ggccatcggc tcgtcgagca gcagcaggcg cgggtcgccg gccagcgcca
      601 tggcgatctc gagctggcgc tgctcgccat ggctcaaggc ggcggcggtc gtgtcggcgc
      661 ggttggcgag gccgacgtcc gccagcccct gccgcgccgg tccgcgcagg cgctcgtcgc
      721 ggcgggcatc ggccaggaag cggaaggaat ggccggcatg ggcctggacg gccagcgcca
      781 cgttgtcgag ggcggtgaac tcgcgcagca ccgaggtgat ctggaaggag cgcgccaggc
      841 ccagccgcac ccgggcgtgc gtcggcaggc gggtgacgtc gcggccggcg aaatggatgg
      901 cgccggaatc gggctccagg ttgccggtga gctggctcac cagcgtggtc ttgcccgcgc
      961 cgttggggcc gatcagggcg tggatctcgc cgggcttcac atcgattgag accgaatcgg
     1021 tggcgaccag gccgccgaag cgcttgatca ggcggtcggt cgagagcagc ggctcagcca
     1081 tggcggcgcc cgaacaggga atcgatgccg cccctggcgt agagcgcgat cagcaccagc
     1141 atgggaccga acacgatctg ccaatattcg ccccaacctt tgcggccgag atcgagcagc
     1201 ggcggcagcg attcctccag cacgaagaag gcgatggtgc cgtagagcgg gccgaacagg
     1261 gtgcccatgc cgcccagcac gacgatgacg atgagatcgc ccgacttcac ccacgacatc
     1321 atggcgggcg agatgtaggc gccctcgttg gcgagcagga tgccggcgag accgccaaaa
     1381 gcgccggaca gggtgaaggc cgccagccgg tagcggaaca ccggaaagcc gagcgccgtc
     1441 atgcgcagat cgttggactt ggcgccacgg atcaccagcc cgaagcggga aatggcgaag
     1501 cggctgcaga accacaaggt tccgccgagc agcgcaaagc agagccagta gaacgacgcc
     1561 ttgtcgcgca gatcgatcag gcccggaaag cggctgcggc tgatgttgag gccgtcgtcg
     1621 gcgccatagg cctccagtcc ggcgctcaca tagtagacga gctgggcgaa ggcgagggtg
     1681 atcatgatga aatagagtcc gcgggtgcgc agcgacagcg cgccgatcag ggcggcccac
     1741 agcgcggcag cgacaatgcc gaccggccat tgcaccgacc cgctctgtac gccgtgatga
     1801 gacaggatac cgacggcgta gccgccgatg ccgaagaaca cggcatgacc gaagctcacc
     1861 agcccgccat agcccaggat catgttgagg ctgatggctg cgatcgccca gatgacgatg
     1921 cgcgtgccga tcgacagcag ataacgctgg tcgaaggcct gggtcagcag gggcaggacg
     1981 gccagcacca gcaacagcaa ggcggtcacc agtccccgcg gcgtgcgcaa tgacgcgatc
     2041 atgagcgctg gccgaacagg ccggtcggcc gccacaccag cacccccgcc atgacgatat
     2101 agatcaacac ctgggagatg gcgggcgcgg cgctcgaggc ggcggaggtg ctgagaaatg
     2161 tcttcaggaa gtcgggcagg aaggcgcggc cgacaatgtc gatctggccc accaccatgg
     2221 cggccacgaa ggcgcccttg atcgagccga tgccgccgat gacgatgatg acgaaggcca
     2281 cgatcaggat gtcgtcgccc atgccgatct tcaccgagct caagggggcg gccatcaggc
     2341 cggcgaggcc ggcaaaaacc gcacccaggc cgaacaccag ggtgaataaa agctcgatat
     2401 tgacgcccag cgcgccgatc atgcgccggt tggaggcgcc ggcgcggatc agcatgccga
     2461 gccgggtgcg cgccaccagc caggccagca gcgcggcgac ggcggcgccc gccacgatga
     2521 tggcgaaacg gtaggccggg tagggcacgc cgggcaggat ctcgacggtg cgggcgagga
     2581 agcccggcac ggcgatgctt ttgccggccg ggccccagac ggcgcgcacc agctcgttga
     2641 agaacaggat caagccgaag gtcgccagca cctggtcgag atggtcgcgg gcatagagcc
     2701 gtcgcatgac cagggcctcg accgcgaccc ccagcaggaa ggtggcgggc agcgccagca
     2761 gggcgcccag catgaacgaa tcggtccagc cgatcagggt ccaggcgatg taggcgccca
     2821 tcatgtagag cgagccgtgc gccaggttca cgagatccat gatgccgaag gtgagcgtca
     2881 agccggcggc gagcaggaac atcagcaggc cgagctgcac gccgttcagc acctggagca
     2941 gcagatagtc cattcccccg tcacaccccg caaacgaaac gggagcgcgt tgccgcgctc
     3001 ccgtcaaccg tcacgtccgg cgtcctattt catcggacac ttttcatagt aagaatcctt
     3061 ggcatccttc accgccgtgg cgatggtctt caccgtcatc acgccctggg gatccttcac
     3121 cgtttcctgg atgtagaagt tctcgatcgg gaagttgttg gtgttgtact tgaagccgcc
     3181 gcgcagcgac ttgaagttgg ccttcttgag ctcggcgcgg accttgtcct tgctggagag
     3241 gtcgcccttc agcgcctcgg ccgccgaggc gatcagcatg atcgcgtcgt agctctgcgc
     3301 gccgtagtag gacggataga cgccgtgctt cttcttgaag tcggcgacgt agcgcttgtt
     3361 ctgctcgttg ggcaggtcgt tgacccattc ctgggcgccc agcgtgccga gcgccagctc
     3421 gccctgctgc ggcagcgtga tcgcgtcgat cgagaacacc tggtagagcg gcaccgtctt
     3481 gttgaggccg gactgcgccc attgcttgac gaactgaacg ccgtgcgcgc cgggatagaa
     3541 gatgaagatg ccctcgggct tggcggcggc gatcttggcc agttcggccg agaagtcgag
     3601 ctggtcgggc cacttggtga agtcctcgcc gatcagcttg cccttgtagg tgcgcctgac
     3661 gccggccagc atgtccttgc cggcggcgta gttgggaccc atcaggtaga ggcttttgac
     3721 gcccttggtg ttgaggtatt cgcccatcgc catcggcgtc tggtcgttct gccacgaggt
     3781 cgagaagaag ttcttgttgc agagctcgcc cgcgatctgc gacggcccgg cattggccga
     3841 gatcaggatg gtgtcgcctt cgtcggtcac ggtcttgagc gaggctaaaa gcacgttcga
     3901 ccagatgtag cccgcgacga cgttgacctt gtcctgctgg acgagcttct cggatttctg
     3961 cttgccgaca tccggcttga actggtcatc ctcgtagacg atctcgaacg gcttgccgcc
     4021 catcttgccg ccgagatgtt ccttggcgag ctcgaccgag cggcgcatgt cctcgccgat
     4081 cgcggcctgc gggccggaga aggtgctgat gaagccgatc ttgatcggcg cctgaccgga
     4141 cgccggctgc aacccaacga ccagcgccgc gattgttgcg gcccccaaca atttgccgtt
     4201 cattgttcaa ctccctgctt cagttggact gtataaaagc cgaaaacacc ttatgcacgc
     4261 aatttgtagc gctggatctt gccggtggcg gtcttgggca gttccgtcac gtattcaacc
     4321 cagcgcgggt acttgtaggg ggcgagcgtg gtcttgcaga gcgccatcag ctcgtcggtc
     4381 agccccggac cgcccgatcc cgcctgcttc agcaccacga aggccttggg cttgatcagg
     4441 ctgttctcgt cggcatggcc gacgaccgcg gcctcaagca ccgccggatg gccgatcagg
     4501 cagctttcga cctcgaccgg cgagcaccag atgccgccca ccttcagcat gtcgtcgctg
     4561 cggccgtcat agatgaaata gccgtcctcg tcctggcgat aggtgtcgcc ggtgttcagc
     4621 cagccatcga ccatggtctc ggccgtcttc tcgggcttgt tccagtagta ttttgcggcc
     4681 gattcggagc ggatccagag gcgcccgctt tcgcccttgg cgaccggctt gccgttctca
     4741 tcgacgatct tgacctcgta gcccgggacc ggcttgccgc tggtgcccgg ccggtagtcg
     4801 tcgagccggt tgccgatgaa gatgtgcagg cattcggtcg agccgatgcc gtccaggatc
     4861 accgtgcccg tcttctcctt ccagcgccga aagatgtcgg cgggcagcgc ctcggccgcc
     4921 gagacgcagg cgcggatgct gtcgaagcga cgcggcttgg tctcgagcgc ggcgagctgc
     4981 gcggcataga gtgtcggcgc gccgtaatag agcgtgggcc tgaaggcctc gatcgtctcg
     5041 aacaccgtgt cgggcgtcgg ccggcggtcg tccaacaccg cggtgctccc ggtccacaac
     5101 gggaaggtca tggagttgcc cagcccatag gcgaagaaga gcttgccggc ggagtagctg
     5161 acgtcgtcct cgcgcatgcc cagggcgcgc acgccataga gttcgctcgt caccaccatg
     5221 tcgcgctgca ggtgcacggc gcccttgggt cgaccggtcg agcccgagga atagagccag
     5281 aagcaatcgt cggtcggcga ggcaagccgc gcctcgagag ccggcgaggc cttgaccgtc
     5341 tcggcgagga aggcatcgac cgtgccgccc ttgaccgaca cctgcttcag cgccggctcg
     5401 acctcgcgtg cgaattcgct cgaatagacc acgagcttgc agcccgaatc ctcgaacagg
     5461 taggcgtaat ccgccgcccg cagcagcgtg ttgagcggcg ccggcacgat ccccgccttg
     5521 atggcgcccc agaagagata gaagaaggcc gggcaatcct tgacgaccat cagcaggcgg
     5581 tcgccaggct tcagacccgc cgccagcagc gcgttcccgg tgcggttcac gcgctcggcg
     5641 agctgggcat aggtgacggt ctcggtcgcc gtccggatgg ccaccttggc gccgcgccct
     5701 tcgccgacgt gacggtcgat gaagggcacg gcgacgttga agcggccagg aaggccgacc
     5761 ttgtagtcgg acgagaagga gatgccggac ggaagcgtca tgacgggacc tggaacggaa
     5821 gttgtagagc gtcgccagcg tgtcggcgac cccttgatcg tgtacgatcg ggtcgactga
     5881 gggaggagac gccatgccgg tcatcgacta tgcggcgctg ccggaattcc ccatgcgggc
     5941 cgggatcacc ggcaaatgga tcgccggcca cgagcacggc tcgacgtcgg tcagcgtgct
     6001 gcacaacacc gtcgagcccg gcgtcgccgt gccgcggcat tttcatgaat acgaagaggt
     6061 cgttctcgtc gaggccgggc aggtctgggt cgacctggac aaggtccggg tgacggcgac
     6121 gcccgggcag tgcgtcgtca tcccgccgca caccccgcat gcctggggtg ccgtgggccc
     6181 tgaccccgtg cgcgtcgtgt tcatctggcc ggtgctcgac ccgttcgcgc cgggcaagag
     6241 cacctatctc gaaggcgcgc ctcccgcggt gagctgaagc aggggtcaga gcttggcgcc
     6301 cgaggctttc accggggcct ggaaagtctg cacctggttg gccacgaaag cggtgaattc
     6361 ggcggaggtc atgggctttg tgacgaagcc cagctcgccc agccgctcga cgatcctggg
     6421 gtcggccagc acctcggccg tcgccttgtg caatcgggcc tgagcgtccg ccgggaaacc
     6481 cgccggcgcg gagaggccga cgaagttctc ggccaccagc ttcgggtagc cgagctcggt
     6541 gaccagcggc acctcgggcg cgctcggcgc cttctgcgtc gaggtgagcg cgatcatgcg
     6601 cagcttgccg tccttggcga gcggcagcac ctcggtgagc gtcaccacgg cgaaatcgag
     6661 ctggtccgcc atcatgtcct ggaacatcgg cgcggcgcca cgatagccga tatgctccat
     6721 gttgaggccg agctcggcct tgaacatctc gccaatgata tggccgatcg agccctggcc
     6781 gcccgagccg aacggcacgg tcttgttctg cgctttgatc caggcgatca gctccggcat
     6841 ggtcttggcc ggcaccgcgg ggcgcacgac gaaggcgttc gccaccgagc cgatataggc
     6901 cacgtgcacg aagtccttca gcggatcgta gggcggcttg tcgaacaggt agggcgcgat
     6961 cgagatcggc gcgctgttgg agagcatcag ggtgtggaag tcgtccttgg ccgccagcac
     7021 gaagttggcg cctatggtgg tgccgccgcc cggcttgttg tcgacgatga cggtctggcc
     7081 gagcttctcc tgcaatggtc cggagatcac ccgcgccgcg gcatcggagg caccgcccgg
     7141 cgggaaggtg acgatgatct tgacggcgcg ggccggccat tgctgggcgg ccgctttgcg
     7201 ggccacgacg aacgcggccg ccgatgccag gacagttctg cgcgcgatca tgcgattccc
     7261 ccatgaatga gcatgcgcaa gggtaagcaa tcgccatgcc catggtcagg ccccaccacg
     7321 aaaaagtgag atgccccagg gcgtcatctt gagcggcagg tgatagtgct gcgccagatc
     7381 ggcgatgccg aagcgatacg gcacgacctc gaggaaggcg ggcgatggca agggcactcc
     7441 tcgtgcgcga taccagtcgc cgacatggaa cagcgcctcg tagagtccgg tggacacgac
     7501 accttcgccg cgcgccgtcg gatggtcgaa ggcgccgttc gcgccgatcg tgcccgatgc
     7561 caacgacttg ccgcccggtc cgttgagctc gaccctgagg ccagccgccg gcacgccgct
     7621 cgagacgtcg tagacgtgga tcgagatgcc gcccggcatc aattgaacct gacgtactcg
     7681 aaatcggccg gctggccgtt gatgccgcgc gccggcggcg cgatccagtg ggcgaacttg
     7741 ccgggctcga ccacggcggg ccccatgagc gaggtgacgt aggcgcggtc ctcgtcggtc
     7801 ggcagccact tgctttcgtt cgccttccag tcggcctcgc tcatgacctt gccgtcgggt
     7861 gacacgtgca gctcggagaa ggccccgatg cggcgatgga aggcgcgatg cggcagcttg
     7921 agctcgaagt cgatgccggc ctgctcgatc gccttgttcc agcgcagcag gcccctggcg
     7981 caatcctcga ggtagtcctg gcgcagccgt tcgttcagcg cctgcagtgc cggcacggtc
     8041 ttgcggacga tgcggccgtt gtcggtggtg tcgatgtcga aggccgcatc ggtgaggacg
     8101 tgatcgtcct cgatgcgtgt ctcgagatag cggcccttca cgcccatcgt gtagtagttg
     8161 gcggcgttgg ttgacgcttc ctggccgaac aggtcgagcg acaccgagca gtggaagttg
     8221 aggtacttct ggatggttgg caggtcgatg gcgcccagtg cacgcgcgtc gtcggtcttg
     8281 tgctccttca tcagatcgca ggtgcgctgg acgatgcgct gcacgccgga ttcgcccacg
     8341 aacatatggt gcgcttcctc gatcagcatg aagcggcagg aacgcgccag cggatcgaag
     8401 cccgattcgg cgagtgacgc gagctggtac ttgccgtcgc ggtcggtgaa gtaggtgaac
     8461 atgaagaagg agagccagtc cggcgtctgc tcgttgaagg cgccgagaat gcgcggcttg
     8521 tcgggatcgc ccgaatggcg ctcgagcaga gcctcggcct cctcgcggcc gtcgcggccg
     8581 aaataggcgt gcagcaggta gaccatggcc cacaggtggc ggccttcctc gacattgacc
     8641 tggaagaggt tgcgcaggtc gtagagcgag ggcgccgtct tgcctaaaag gcgctgctgc
     8701 tcgaccgatg ccggttcggt gtcgccctgg gtcacgatca ggcggcgcag cgtcgagcgc
     8761 agctcgcccg gcacctcctg ccaggcaggc ttgcccttgt tgtcgccgta ggcaatcacg
     8821 cggttggggt tgcggcccgc caggaagatg ccccagcggt agtccggcat cttcacatag
     8881 ccgaaattgg cccaaccgtt ggcttccgcg gaaatggcgg tgcgcagata gacgtcgaag
     8941 ttcaacgtgc catccgggcc catgcctttc caccagtcga ggaagcgcgg ctgccagttc
     9001 tcgagcgcgc gctgcaggcg gcggtcgccg gcgaggtcga cgttgttggg aatgagctgg
     9061 ctgtagtcga tggccatgtc tgcctcctta agcccgcttg cggtcgaatt tgctctgctt
     9121 gcccgtgccg tagagtttca gcgcgccctc cgggccggtc gcgttggggc gctggaatat
     9181 ccagttctgc caggccgaga gacgggcgaa gatcttggtc tccatggtct cggggccggc
     9241 gaagcgcaga ttggcttcca tgccgatcag accgtcgggc gagaagcccg cgcgttcttc
     9301 gatagcgagc cgcacttcgt cttcccagtc gatgtcgtcg ggcgcgaaag tgacgaggcc
     9361 tg
//
LOCUS       DASWGA010000755         4076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_86400, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000755 DASWGA010000000
VERSION     DASWGA010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4076
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86400"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /locus_tag="VF991_17675"
     CDS             <1..852
                     /locus_tag="VF991_17675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HEX9558328.1"
                     /translation="ARHMSFTDAADELSVTQAAISHQVRGLEQRLGLKLFVRRNRSLL
                     LSEAGQAYLPSVRGAFDQLNEATEKLLQKDRGGHLTVTTTASFAMKWLVPRLGGFQRA
                     NPEIDVRISTNTGLVDFSREDVDIGIRYGRGQWPGLTAERLVTEDVMPVCAPSLIKGP
                     NALKRPADLKRFTLLHVGSFPDEWQVWLTAAGVKGIDASRGISFDFALAGYQAAMDGL
                     GVALGRQPLVAPDLKAGRLVVPFEFKMSTEFAYYVVYPTEAIRRRKIKAFRDWVVSLA
                     EVEPRAA"
     gene            920..1999
                     /locus_tag="VF991_17680"
     CDS             920..1999
                     /locus_tag="VF991_17680"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9558329.1"
                     /translation="MEFGYFTLSDNRYPDNPRAPEDFIKDIYAEALWAEKVGLHSAWI
                     GEHHFNLLGVNASPLAILAQLAGATSRLRLAPAVTLLPVHHPLHVAEEWATLDLLSGG
                     RVDFAAGRGYDRKEYEPFGAPFDDSAELFAEGLEIVWRAWTETGKWSHKGRFYQFKDV
                     DVRPKPAQKPLRPYVACFSRPSMELAARNDWNVIYAPFAAAMVYGSLADAVRVYRDTC
                     ESEFRRPMRRAMCSYFVHIASTPEEEQYGKEALVHYFQDALIAAFPSASGEKVPPTYK
                     YFVDIVNILRDMRPEKLTDKSILCGSPQHIVDTLKQVEKAGIAEVILYFNYGRKPHAL
                     VKEQMERFMREIAPHFAAAAPLRAA"
     gene            1999..2436
                     /locus_tag="VF991_17685"
     CDS             1999..2436
                     /locus_tag="VF991_17685"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX9558330.1"
                     /translation="MSPLDSYLPYLLNRAGARIAASFSDKVRPLGATLQMWRVLAALG
                     EQDGRRMGDLSTTTSIEVSTLTRLVDNMEKKGLVARRRDPQDARAIVLHVTPAGRRLT
                     QRIVPIAERYETVALAGFNSAETRTLKAALRRLYANMEGLERS"
     gene            2489..3112
                     /locus_tag="VF991_17690"
     CDS             2489..3112
                     /locus_tag="VF991_17690"
                     /inference="COORDINATES: protein motif:HMM:TIGR04025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MSMEG_1061 family FMN-dependent PPOX-type
                     flavoprotein"
                     /protein_id="HEX9558331.1"
                     /translation="MARLTSPDELRRIIAEPRPTTRAKILDALDEQSIDFLKRCPFAL
                     VGTTAADGTVEVSPKGDEPGFIRVEDPKTLLIPERVGNNLAFGLGNILATGQIGLIAL
                     VPATGETLRVSGTAEIYDDADLVASLGSLGKPALLATRVHIKHCYFHCARSIVRAKLW
                     DPKAWPAPGRVSFGKIIAPRVGAGADMAARIDASVEGAYTTRLWTNS"
     gene            3144..3899
                     /locus_tag="VF991_17695"
     CDS             3144..3899
                     /locus_tag="VF991_17695"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558332.1"
                     /translation="MGGLLLALGACSTAPQPAPLRTLSPGTLRIGTYFVNPPFEYVSN
                     GQRIGFEVDLMNEIARRLSLQPVFVDTEWETILQEMQNGKYDCIVGGITITPERRRML
                     AWSAPYMTTTLSLVVDSRRSPQIRSMADFRTASVGVQAATTDYDIALKLQQQGRIGGI
                     KVYSFARIQDAMVDLAAGRITTVMKVYPVAAWLARQTAGLSIVAQVPDDPQPLGIGFA
                     PDNPGLLAAANRVLADMDRDGSTARLAQKWGVP"
BASE COUNT          676 a         1390 c         1322 g          688 t
ORIGIN      
        1 gcccgccaca tgagctttac cgatgccgcc gatgagctca gcgtcaccca ggccgccatc
       61 agccaccagg tgcgcgggct ggaacagcgc ctcggattaa aattgttcgt gcggcgcaat
      121 cgttcgctgc tgctgtcgga agcgggccag gcctacctgc cgtcggtgcg cggggctttc
      181 gaccaattga acgaggcgac cgaaaagctc ctgcagaagg accgcggcgg ccatctcacc
      241 gtcaccacca cggcctcgtt tgccatgaag tggctggtgc cgcggctcgg cggcttccag
      301 cgcgccaatc ccgaaatcga cgtgcgcatc agcaccaaca ccgggctggt cgacttctct
      361 cgcgaggacg tcgatatcgg catccgctac ggccgcggcc agtggccggg cctgaccgcc
      421 gagcggctgg tcaccgagga cgtcatgccg gtctgcgcgc cgtcgctgat caaggggccg
      481 aatgcgctga aacggccggc cgatctcaag cgcttcacct tgctgcacgt cggaagcttt
      541 cccgatgagt ggcaggtctg gttgaccgcc gccggcgtca agggcatcga tgcctcgcgc
      601 ggcatctcct tcgacttcgc gctggcgggc tatcaggcgg cgatggacgg gctgggcgtg
      661 gcgctcggcc gccagccgct ggtggcgccc gacctcaagg ccggccgtct ggtcgtaccc
      721 ttcgaattca agatgtcgac cgagttcgcc tactacgtgg tctatccgac cgaggcgatc
      781 cggcggcgca agatcaaggc cttccgcgac tgggtcgtgt ccctggccga ggtcgagccg
      841 cgcgcggcgt aggcagttat ttgcatttgc aaataagtag aagcgggcgc atcctgccgg
      901 caagacagga ggggacgcca tggagttcgg ttacttcacg ctgagcgaca atcgctatcc
      961 cgacaatccg cgcgcgcccg aggacttcat caaggacatc tatgccgagg cgctgtgggc
     1021 cgagaaggtt ggcctgcact cggcctggat cggcgagcat catttcaacc tcttgggcgt
     1081 caacgcctcg ccgctcgcca tcctggcgca gctcgccggg gcgaccagca ggctgcgcct
     1141 ggcgcccgcc gtcaccctgc tgccggtgca ccatccgctg catgtcgccg aggaatgggc
     1201 gacgctcgac ctgttgtcgg ggggacgggt cgattttgcc gccggccgcg gctacgaccg
     1261 caaggagtac gagccgttcg gcgcgccgtt cgacgattcc gccgagctgt tcgccgaggg
     1321 ccttgagatc gtgtggcggg cctggaccga gaccggcaag tggtcgcaca agggcaggtt
     1381 ctaccagttc aaggacgtcg acgtgcggcc caagccggcg cagaagccgc ttcggcccta
     1441 cgtcgcctgc ttctcgcggc cctcgatgga gcttgccgcc cgcaacgact ggaacgtgat
     1501 ctacgccccc ttcgccgccg ccatggttta cggctcgctg gccgacgccg tgcgcgtcta
     1561 tcgcgacacc tgtgaaagcg aattcaggcg gccgatgcga cgcgccatgt gctcctactt
     1621 cgtgcacatc gcctcgacgc ccgaagagga acagtacggc aaggaggcgc tggtgcacta
     1681 tttccaggac gcgctgatcg cggccttccc ctccgcgtcg ggcgagaagg tcccgccgac
     1741 ctacaagtat ttcgtcgaca tcgtgaacat cctgcgcgac atgcggcccg agaagctcac
     1801 cgacaagtcg attctgtgcg gcagcccgca gcacatcgtc gacaccctga agcaggtcga
     1861 gaaggccggc attgccgagg tgattctcta tttcaactac ggccgcaagc cgcatgcgct
     1921 ggtcaaggag cagatggagc gcttcatgcg cgagatcgca ccgcacttcg ccgccgccgc
     1981 gccgctgcgc gcggcgtgat gagtcctctc gactcctacc tgccctacct gctgaatcgc
     2041 gccggcgcgc gcattgccgc ttcgttcagc gacaaggtcc gcccgctcgg cgccacgctg
     2101 cagatgtggc gcgtgctggc cgccctgggc gagcaggatg gccggcgcat gggcgatctc
     2161 tcgacgacca cctcgatcga ggtctcgaca ctcacgcgcc tggtcgacaa catggagaag
     2221 aaggggctgg tcgcccgccg ccgcgatccc caggatgcgc gcgcgatcgt gcttcatgtt
     2281 acccccgccg gccggcgcct cacccagcgc atcgtgccga tcgccgagcg ctacgaaacc
     2341 gttgccttgg ccggcttcaa cagtgccgag acgcgaaccc ttaaggcggc gctgcgccgc
     2401 ctctatgcca atatggaagg tctcgagcgc agttgaatca tcccatccga tcgtcgatgg
     2461 tggtgcgcac gattcgcaag ggattaccat ggcacgtctc acgtcacccg acgaattgcg
     2521 tcgcatcatt gccgagccgc gtccgacgac acgcgccaag atcctcgacg cgctcgacga
     2581 gcagtcgatc gacttcttaa agcgctgtcc gtttgccctg gtcggcacga cggcggccga
     2641 cggcaccgtc gaggtctcgc ccaagggtga cgagccgggc ttcatccggg tcgaggatcc
     2701 gaagacgctg ctgattcccg agcgggtcgg caacaacctg gccttcgggc tcggcaacat
     2761 cctggcgacc ggccagatcg gccttatcgc actggtgccg gcgaccggcg agaccttgcg
     2821 cgtgtcgggc acggccgaga tctacgacga tgccgacctg gtggcctcgc tcggctcgct
     2881 cggcaagccg gcgctgctcg ccacccgcgt gcacataaag cactgctact tccactgcgc
     2941 gcgctcgatc gtgcgcgcca agctgtggga ccccaaggcg tggccggcgc cgggccgcgt
     3001 gtcgtttggc aagatcatcg cgccccgggt cggcgccggc gccgacatgg cggcccggat
     3061 cgatgccagc gtcgagggcg cctacacgac acggctgtgg accaacagct aggacgatga
     3121 cggccacttg gacgaggcgc ggcttgggcg ggctgctgct ggcgctcggc gcctgctcga
     3181 cggcgcctca gcccgcgccg ctgcgcacgc tgtcgcccgg aacgctgcgc atcggcacct
     3241 acttcgtgaa cccgccgttc gaatatgtct cgaacggcca gaggatcggc ttcgaggtcg
     3301 atctcatgaa cgagatcgcc cggcgccttt cgctgcagcc cgtgttcgtc gacacggagt
     3361 gggagacgat cctgcaggag atgcagaacg gtaaatacga ctgcatcgtg ggcggcatca
     3421 ccatcacgcc cgagcgccgg cggatgctgg cctggtcggc accctacatg accacgacgc
     3481 tcagcctggt ggtcgacagc cgccgctcgc cgcaaatccg cagcatggcc gactttcgca
     3541 ccgcctcggt cggcgtgcag gcggcaacga ccgactacga catcgccctc aagctgcagc
     3601 agcagggccg gatcggcggc ataaaagtct actccttcgc ccgcatccag gacgccatgg
     3661 tcgatctcgc cgccggccgc atcacgacgg tgatgaaggt ctatcccgtg gctgcctggc
     3721 tcgcccgcca gacggcgggc ctcagcatcg tggcccaggt gcccgacgat ccgcagccgc
     3781 ttggcatcgg ctttgccccc gacaatccgg gcctgcttgc ggcagccaac cgcgtgctcg
     3841 ccgacatgga tcgcgatggc agcaccgcca ggctggcgca aaagtggggt gtgccttagc
     3901 gcggaaggtg ggaggatgac cttcgatgag gcgtaaggtc ggtctgttcc ttctggccgt
     3961 gatggtggcg gtgagccttg gcgccacgac cgtgacctcg ctggcgatgt acaggttggt
     4021 ctcgcagaag caggttgtcg agatccacaa tatcgaggcg agcctgtccg accgct
//
LOCUS       DASWGA010000756         1833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1615602, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000756 DASWGA010000000
VERSION     DASWGA010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1615602"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..614)
                     /locus_tag="VF991_17700"
     CDS             complement(12..614)
                     /locus_tag="VF991_17700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558333.1"
                     /translation="MRIKAIMAGAIAALALAALTASANTTTTPRTSGSLVSLVAATTT
                     VAKVEATVAETRIAERDKTEPTIKPVVAVKPVTPRVLSAACQQAINTLKAMRQADVAE
                     DTTERAGLQPLSAATIAADRAEDLAEVQPWNQALMAARTACLPQPNAACQAALASLKA
                     LLPANRPEEWSDLVKLPNPIDLTALRAAFTAVATACGDRD"
     gene            810..1133
                     /locus_tag="VF991_17705"
     CDS             810..1133
                     /locus_tag="VF991_17705"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9558334.1"
                     /translation="MPVETLLQIVLAVMSGEITIAKAARRHGVSTELINRWRNRFVDA
                     GKAAMEDGMPGGKGAGRGNFVERRQRAEIQELKLALAEATVQLRIWQKGSEYIDQVPS
                     QTSRP"
     gene            1172..>1833
                     /locus_tag="VF991_17710"
     CDS             1172..>1833
                     /locus_tag="VF991_17710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558335.1"
                     /translation="MAGIPERSYRRRLARLRAGDEAAKGPWPSPAVDAVEALAAKYAS
                     DWPAWGHRKIAAMMRADGHAVSTSTVEWALRRRGRLLPRGFRADRKSWAALRRKLFRD
                     PPSERDRVWQTDFSESKTPSGGICRICAVIDYATKFCLAATVGPTARGADALACLNAA
                     VAEAQRVLCLDDLRADRGTIELVDETTGEIIDVVPAPIALVSDNGPCFRGETYKTAFA
                     GE"
BASE COUNT          277 a          596 c          638 g          322 t
ORIGIN      
        1 ctagcttctg gttagtcgcg gtcgccgcag gcggtggcga cggcggtaaa ggccgcgcgt
       61 agggcggtca ggtcgatcgg gttcggtagc ttgaccagat cgctccactc ttccggtcgg
      121 tttgccggta gaagcgcctt caaactggct agggcagcct ggcacgcggc attcggttgt
      181 ggaaggcacg ccgtccgcgc cgccatcagc gcctggttcc agggttgaac ctcggcgagg
      241 tcttcggcac gatccgccgc gatcgtcgcc gctgagagcg gctgcagccc ggcccgctcc
      301 gtggtgtcct cggccacgtc ggcctggcgc atcgccttga gggtgttgat cgcctgctgg
      361 cacgcggccg acagcacccg aggcgtcacc ggcttcacgg ccaccacggg cttgatggtc
      421 ggctcggtct tgtccctttc ggcaatgcgc gtctccgcca cggtcgcctc aacctttgcg
      481 acggtcgttg tcgccgccac caggctgacc aggcttcccg atgtccgggg ggtcgtcgtg
      541 gtgttggcac tcgccgtcag ggccgccaat gcaagcgctg cgatggctcc cgccatgatc
      601 gctttgattc gcacgattcg tcctccttgt ggggtagtcg ccttctaaaa cggcggagac
      661 cgagctcgct tacgcctggt aaagaatcat ctagaccgac ggcgaacgat tgttcgggtc
      721 gctagctctc tagtgcgtca agataactgg cagggtttca gggcgagacc gtgacaggag
      781 aaacgatctt gagcaggtcc aacgacccgg tgccggtcga gacgctgctg cagatcgtgc
      841 tggccgtgat gtcgggtgag atcacgattg ccaaggccgc ccgccgccac ggcgtctcga
      901 cggagttgat caatcggtgg cgcaaccgct tcgtcgatgc gggcaaggcc gcgatggaag
      961 acgggatgcc tggcggtaag ggcgccggcc gcgggaactt cgtcgagcgc cggcagcggg
     1021 ccgaaatcca ggaattgaag ctcgcgctgg ccgaggccac ggtgcagctg cggatctggc
     1081 agaagggctc ggagtacatc gaccaggtcc cttcgcagac ctcgaggccc tgagagcggc
     1141 agcgcagctg ccggtcggga ggttcgccgc cttggccggc atccccgaac ggagttaccg
     1201 ccgacggctt gctcgcttgc gggctggcga cgaagccgcg aagggcccgt ggccgtcacc
     1261 ggcggtagat gctgtcgagg cgttggccgc gaagtacgca tcggactggc cggcgtgggg
     1321 gcatcggaag atcgcggcga tgatgcgcgc cgatggccat gccgtgtcga cctcgacggt
     1381 cgagtgggcg ctgcgtcgcc gcgggcggct gctgccgcgc gggtttcggg ccgatcgcaa
     1441 gtcctgggcg gctctgcggc gcaagctgtt ccgggatccg ccgagcgaac gcgaccgggt
     1501 ctggcagacc gacttcagcg agtccaagac gccttcgggc gggatctgtc gcatctgtgc
     1561 ggtgatcgac tacgccacca agttctgcct cgccgccacc gtcggaccaa cggcccgcgg
     1621 cgccgacgct ctcgcttgcc tgaacgcggc cgtcgccgaa gcccaacgcg tgctttgtct
     1681 cgacgatctg cgcgccgacc gcggcaccat cgagctggtc gacgagacca ccggcgagat
     1741 catcgacgtc gtcccggccc cgatcgccct cgtgtccgac aatggacctt gcttccgcgg
     1801 cgagacctat aagactgcct tcgccggcga gga
//
LOCUS       DASWGA010000757         2883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1346970, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000757 DASWGA010000000
VERSION     DASWGA010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346970"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..811
                     /locus_tag="VF991_17715"
     CDS             86..811
                     /locus_tag="VF991_17715"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX9558336.1"
                     /translation="MEPGLTEDTLLAGRVRVLQPERGYRIAVDAVLLAAAIDAAPGER
                     VLDLGAGVGTVGLCLAARVPQCTVVGIELQPALAQLAVRNALLNGVAGRLQTIVHDIA
                     RPLPSDLGPFDHVATNPPYLAAAAADPSPLRSKALATVESSADLARWLGVAAGAAKPA
                     GTLLVIHRSDRLEEVVSCLVGLGWGDVTIKRLPPAPRVLVRARRSAAARRREAAPFVL
                     HRPDGGYTDAAEAVLRGAAPLAF"
     gene            836..1663
                     /locus_tag="VF991_17720"
     CDS             836..1663
                     /locus_tag="VF991_17720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEX9558337.1"
                     /translation="MLDWLKDRFRRGPVVPVVRLSGVIASSGLLGNRSLSIETVAPLL
                     KRAFDMRGAKAVALAINSPGGSPVQSALIGQRIRLLADEKKLKVVAFVEDVAASGGYW
                     LACAADEIIVDPHSIVGSIGVISAGFGFQDLIGRIGVERRLHTSGERKSMLDPFRPEK
                     SEDVERLARLQAEIHDGFKDWVRQRRAGKLNGDEQSLFSGEFWTGRRGAELGLVDGLG
                     ELRATLQARYGTKVRLPVIGPRRRLLSRFGLGLSVDGIGPGTLAALEERLHWQRFGL"
     gene            1677..2129
                     /locus_tag="VF991_17725"
     CDS             1677..2129
                     /locus_tag="VF991_17725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009488999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketosteroid isomerase"
                     /protein_id="HEX9558338.1"
                     /translation="MKLRNPVNPEDLAAVRTWFDRLAKHCRAVDYEGARPIFAEDMIA
                     FGTFTDFMIGREPAEQKQWRNVWGTIRNFRYDLDKVEAIVSADRLMAVGMGVWQSDGY
                     YANGDRFDRPGRTTVTLARQATGDPFVATHTHMSLFRGTPDQSFGKFG"
     gene            complement(2142..>2883)
                     /locus_tag="VF991_17730"
     CDS             complement(2142..>2883)
                     /locus_tag="VF991_17730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEX9558339.1"
                     /translation="ASDKLQAIIVASQAAQPIFARAPAAGPLDDQAADDDISRFLTTG
                     KPDDRTLPAMALRNADVATTLGSAAAIDELSPAERSRLRRDIYLVDAGILKLINGGFV
                     AGADAVTLNALRAKFLPLTNYIPLWVKLAVAVTLGLGTMIGWQRIVRTIGEKIGQSHL
                     TYAQGASAELVAMLTIGAADVSGVPVSTTHILSSGVAGAMFASHSKLQRATLRNIVLA
                     WVLTVPACMSLGSVLFAAMLYAFLRLFD"
BASE COUNT          442 a          982 c          984 g          475 t
ORIGIN      
        1 gagggagacg accgtggcca tgtgttagga taatcccccg cgtgaggccg gttgtgcgac
       61 acgatgtcgt gacatgatcc ctagcatgga accgggcctg accgaagaca ccttgctggc
      121 cggccgcgtc agggtgctgc aacccgaacg cggttatcgc atcgccgtcg acgccgtgtt
      181 gctggccgcc gcgatcgatg ccgcgcccgg cgagcgcgtg ctcgatctcg gcgccggcgt
      241 tggcaccgtc ggcctttgcc ttgccgcgcg cgtgccgcaa tgcacggttg tcggcatcga
      301 attgcagcct gcgctggcgc aattggccgt acgcaacgcc ctgctcaacg gcgtggccgg
      361 ccgtttgcaa acgattgtcc acgacatcgc ccggccgctg ccatccgatc tcggcccgtt
      421 cgatcacgtt gcgaccaatc cgccctatct ggcggctgcc gcagccgatc cctcgcctct
      481 gcgcagcaag gcgctggcta ccgtcgaatc gagcgccgac ctggcgcgct ggcttggcgt
      541 tgcagcagga gcggcaaaac ctgcaggcac cctgctggtc atccatcgca gcgaccggct
      601 ggaggaggtc gtgagttgcc ttgtcgggct gggctggggc gacgtgacga tcaagcgcct
      661 gccgcccgcg ccacgcgtgt tggtgcgcgc ccgcaggtcc gccgcggcgc ggcggcgcga
      721 agccgcgccc ttcgtgctgc accgtccgga cggcggttat accgacgcgg ccgaggccgt
      781 cctgcgcggc gccgcgccgc ttgccttctg aggcgcgcgc cgcgacagtg ccgcaatgct
      841 ggattggcta aaagaccgtt ttcgccgcgg tcccgtcgta cccgtcgtcc gcctgtccgg
      901 ggtcatcgcc tcgagcggcc ttttaggcaa ccgcagcctg tccatcgaga cggtggcgcc
      961 gctgctcaag cgcgccttcg acatgcgcgg cgccaaagcc gtggcgctcg ccatcaactc
     1021 tcccggcggc tcgccggtgc agtcggccct gatcggccaa cgcatccgcc tgttggccga
     1081 cgagaagaag ctgaaggtgg tcgcctttgt cgaggacgtc gccgcttccg gcggctactg
     1141 gctcgcctgc gcggccgacg agatcatcgt cgatccacac tcgatcgtgg gctcgatcgg
     1201 cgtcatcagc gcgggcttcg gcttccagga cctgatcggc cgcatcggcg tggagcggcg
     1261 cctgcacacg tccggcgagc gcaagtcgat gctcgatccc tttcgtccgg agaagtccga
     1321 ggatgtcgaa cggctggcgc gcctgcaggc cgagatccac gacggcttca aggattgggt
     1381 gcgccagcgc cgtgccggca agctcaacgg cgatgagcag tccctgttca gcggtgaatt
     1441 ctggaccggc cggcgcggcg ctgagctcgg tctggtcgac ggcctgggcg aattgcgcgc
     1501 cacccttcag gcgcgctacg gcaccaaggt gcgcctgccg gtgatcggcc cgcgccgccg
     1561 gctgctgtcg cgcttcgggc ttggcctgtc ggtcgacggc atcgggcccg gcacgcttgc
     1621 cgccctcgaa gagcgcctgc actggcaacg tttcggcctc taggagcctt gccgcgatga
     1681 agcttcgcaa tcccgtgaat cccgaggacc ttgctgcggt ccggacctgg ttcgacaggc
     1741 tcgccaaaca ctgccgcgcg gtcgactacg aaggcgcccg gccgatcttc gccgaggaca
     1801 tgatcgcctt cggcaccttc accgacttca tgatcggccg cgagcccgcc gagcagaagc
     1861 agtggcgcaa cgtgtggggc accattcgca acttccgcta cgacctcgac aaggtcgagg
     1921 ccatcgtctc ggccgaccgg ctgatggcgg tcggcatggg cgtttggcag tccgacggtt
     1981 actatgccaa cggcgatcgc ttcgaccggc cgggccgtac cacagtgacg ctcgcgcgcc
     2041 aggcgacggg cgatcccttc gtcgccaccc acacgcacat gtcgctgttt cgcggcacgc
     2101 ccgaccagag cttcggcaaa ttcggctgac aggtcggctg atcagtcgaa cagccgcagg
     2161 aaggcgtaga gcatagcggc gaacagcacc gagcccagcg acatgcaggc gggcacggtg
     2221 agaacccagg ccagcacgat gttgcgcaac gtcgcgcgtt gcagcttgga atggctggcg
     2281 aacattgcgc cggcgacacc cgacgacagg atgtgggtgg tgctgaccgg cacgccggag
     2341 acgtcggcgg cgccgatggt gagcatggcc accagttcgg ccgaggcgcc ctgggcgtag
     2401 gtgaggtgcg actggccgat cttctcgccg atcgtgcgca cgatgcgctg ccagccgatc
     2461 atggtgccaa gccccaaggt caccgccacc gcgagcttga cccagagggg gatataattt
     2521 gtgagcggca ggaacttggc cctgagcgcg ttgagggtca cggcatcggc accggccacg
     2581 aagccaccat tgatcagctt caggatgccg gcatcgacga ggtagatgtc gcgccgcagg
     2641 cgcgaacgct cggccggcga cagctcgtcg atcgcagcgg cgctgcccaa cgtggtggcg
     2701 acatcggcgt tcctgagcgc catcgccggc aaggtcctgt catcgggctt gccggtggtc
     2761 aggaagcgcg agatgtcgtc gtcggccgcc tggtcgtcga gcggaccagc ggccggtgcc
     2821 ctggcgaaga tcggctgggc ggcctgcgaa gccacgatga tcgcctgcag cttgtcggac
     2881 gcc
//
LOCUS       DASWGA010000758         5200 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1859110, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000758 DASWGA010000000
VERSION     DASWGA010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5200
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1859110"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VF991_17735"
     CDS             <1..406
                     /locus_tag="VF991_17735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9558340.1"
                     /translation="DDKSQIQEYLSAYHGEGIQHIALGTGDIYQTVETLRARDVPFQT
                     VPDTYYEQVDKRLPGHGEDLARLAVDRILIDGAPTEGGGLLLQIFTQTVIGPIFFEII
                     QRRGNEGFGEGNFRALFESIELDQIRRGVLKA"
     gene            416..1564
                     /locus_tag="VF991_17740"
     CDS             416..1564
                     /locus_tag="VF991_17740"
                     /inference="COORDINATES: protein motif:HMM:NF042789.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEX9558341.1"
                     /translation="MAKNWIPLRQVEGTASRQAHVRLPEGTYEREISKEGFFGPSAQF
                     HHKHKPTDWVEFDGAIRPRAFDLNKLAVGHPNPWQAELVMANPHLQMRIWKLDQPMAE
                     LARNSDGDQLLFVHEGEGALFCDYGHLDYRDGDYLVIPRGTMWRLSPAKSTLSLMVEA
                     TNDHFTLPEKGLVGRHAIFDPAILDTPRIDDAFRAQQDERTWKVSVKRRNQLSTVTFP
                     FNPLDAVGWHGDLSVVRINWRDLRPIMSHRAHLPPSAHTTFVAGRFVVCTFVPRPLES
                     DPEALRLPFFHNNDDFEEIIFYHKGSFFSRDNIHPGMMTVHPSGFTHGPHPKAFNAAT
                     KGGKTETDEVAVMIDTRDAVDLAAMPAGVEFEGYVKSWRPPEMKQAAE"
     gene            1712..2704
                     /locus_tag="VF991_17745"
     CDS             1712..2704
                     /locus_tag="VF991_17745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX9558342.1"
                     /translation="MKLGSLKQGGRDGTLIVVDRALKRAVRASNVAPTLQKALDDWAT
                     TAPKLRALAEALADDKAPGSFALDTGALAAPLPRAFQWADGSAYVVHVELVRKARGVE
                     MPPSFWTDPLMYQGGSDSFIGPNDEIEAGDEAWGIDFEGEIGVIVDDVPMGIAPEAAR
                     RHIKLVTILNDVSLRNLIVGELAKGFGFFHGKPATAFAPVALTPDELGDAWDGARLNL
                     PLISTLNGKEFGHPNAATDLTFDFGQLIAHAARTRHLEAGTVVGSGTVANRDASVGCS
                     CIAERRVRETIDSGKAVTPFMKFGDRIRIEMVDRAGQSIFGAIDQKVVRYTPPG"
     gene            2734..3378
                     /gene="maiA"
                     /locus_tag="VF991_17750"
     CDS             2734..3378
                     /gene="maiA"
                     /locus_tag="VF991_17750"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HEX9558343.1"
                     /translation="MKLIGYFRSSAAFRVRIGLNLKGIVVEHAARHLRKGEQATPDYV
                     ALNPQKLVPTLVLDSGEVLTQSLAILEYLEETHPEPPLLPRDPVDRARVRALALITAA
                     DVHPIQNLRVMAYLRDKFGQTEESAFAWSRHWIETGFDAYEASVAKDRRTGAFSHGDR
                     PSLADLCLVPQVFNARRFKVDMAKYPTIQRIYATCMKHPAFDAAQPAKQPDAEP"
     gene            3375..4856
                     /locus_tag="VF991_17755"
     CDS             3375..4856
                     /locus_tag="VF991_17755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558344.1"
                     /translation="MRKSVLAVVGLVVLAGAAVAAVPILEDHAAGRIKAEIERDGVSK
                     VGQVEVGLFDRRITLVDLKSASSGAELAVGRWQASGLAWPLAELLHGRTPLAGFRWGD
                     PLQADRIELKDVHVVDRAANSSWAMESLVIDGFDLARFDARYDGPYAFQVRTARALGA
                     LTMRRLEERNLLMVMPGTGDTFGVASAVIDRYQGGRIAAMTITSLEATARDGQAPLFK
                     VGEIKAASLDWSRPIAGLGSDKWYPGASTGRVHIDNASASGFTGDLLARYGISLGSVS
                     LETVHENDKLSRSRTRVEGFVLAPPLRGLEGLQMRLALTSMGLKEVKLDLDCTSTEDR
                     AKDELALDRCGLVGPGLGEIDLSAKIVHADPAFWRAVDDGDVLALSESEAGLGSARLV
                     LVDKSLLERGLKALSTVTGQPVSVTRSNLARDIRRYQPAGVLISEDMTKLLDTVARFV
                     EQGGTLTIDAKPESPINLEQLQTLWKPGADLMRLLGLSASLSR"
     gene            complement(4894..5200)
                     /locus_tag="VF991_17760"
                     /pseudo
     CDS             complement(4894..5200)
                     /locus_tag="VF991_17760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597570.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
BASE COUNT          886 a         1771 c         1707 g          836 t
ORIGIN      
        1 cgacgacaag tcgcagatcc aggaatacct ctcggcctat cacggcgagg gcatccagca
       61 tatcgcgctg ggcaccggcg acatctatca gacggtcgaa acgctcaggg ccagggacgt
      121 gccgttccag actgtgcccg acacctacta tgagcaggtc gacaagcggc tgccgggcca
      181 cggcgaggat ctcgcgcgcc tggccgtcga ccgcatcctg atcgacggcg cgccgaccga
      241 gggcggcggc ctgctgctgc agatcttcac ccagacggtg atcggcccga tctttttcga
      301 gatcatccag cgccgcggca acgagggctt cggcgagggc aatttccgcg ccctgttcga
      361 atcgatcgag ctcgatcaga tccgccgcgg cgtcttgaaa gcataggagg aaaccatggc
      421 caagaactgg atcccgttgc gccaggtcga aggaaccgcc tcgcgccagg cccatgtccg
      481 cctgcccgag ggcacttacg agcgcgagat cagcaaggag ggcttcttcg gcccctcggc
      541 gcagttccac cacaaacaca agccgaccga ctgggtcgag ttcgacggcg ccatccggcc
      601 gcgcgccttc gacctcaaca agctcgccgt cggccaccca aacccgtggc aggccgagct
      661 ggtgatggcc aatccgcatc tgcagatgcg gatctggaag ctcgaccagc cgatggccga
      721 gctcgcccgc aacagcgacg gcgaccagct cctgttcgtc cacgagggcg aaggcgcgct
      781 gttctgcgac tacggccatc tcgactatcg cgacggcgac tacctcgtga tcccgcgcgg
      841 cacgatgtgg cggctgtcgc ccgccaagtc cacgctgtcg ctgatggtcg aggcgaccaa
      901 cgaccatttc accctgccgg agaagggcct ggtcggccgc cacgcgatct tcgatccggc
      961 gatcctcgac acgccgcgga tcgacgacgc cttccgcgcc cagcaggacg agcgcacctg
     1021 gaaggtctcg gtgaagcggc gcaaccagct ctcgaccgtg actttcccgt tcaatccgct
     1081 ggacgcggtg ggctggcatg gcgatttgag cgtcgtgcgc atcaactggc gcgacctcag
     1141 gccgatcatg agccatcgcg cccatctgcc gccgtcggcg cacaccacct tcgtggcggg
     1201 gcgcttcgtg gtctgcacct tcgtgccgcg gccgctggaa agcgatcccg aggcgttgcg
     1261 cctgccgttc ttccacaaca acgacgattt cgaggagatc atcttctatc acaagggcag
     1321 cttcttcagc cgcgacaaca tccatcccgg catgatgacg gtccacccct cgggcttcac
     1381 ccacggcccc catcccaagg ccttcaacgc cgccaccaag ggagggaaga cagagaccga
     1441 cgaggtcgcg gtgatgatcg acacgcgcga cgcggtcgac ctcgcggcca tgccggcggg
     1501 cgtcgagttc gagggctacg tgaagtcgtg gcggccgccg gagatgaagc aggcggcgga
     1561 gtagggaaac acagcaaccg tcatcccgac cggagccaag cacagcgagg cggagcggag
     1621 ggacctattc tgtggatgca tcggcaagag gaggtccctc gactgcgccg ccctgcgggc
     1681 ggcttcgctc gggatgacgg aggagaatga aatgaagctc ggttcgttga agcagggcgg
     1741 ccgcgacggc acgctgatcg tggtggatcg cgcgctcaag cgggcggtgc gggcgagcaa
     1801 cgtcgcgccg actctgcaga aggcgctcga cgactgggcg acgacggcac ccaagctgcg
     1861 cgccctcgcc gaggcactgg ccgacgacaa ggcgccgggc tccttcgcac tcgacacggg
     1921 ggcgctggcc gctcccttgc cgcgcgcctt ccagtgggcc gacggctcgg cctacgtcgt
     1981 ccatgtcgag ctggtgcgca aggcgcgcgg cgtggaaatg ccgccgtcct tctggaccga
     2041 ccctttgatg taccaaggcg gctcggattc cttcatcggc ccgaacgacg agatcgaggc
     2101 cggcgacgaa gcctggggca tcgacttcga gggcgagatc ggcgtcatcg tcgacgacgt
     2161 gccgatgggc atcgcgcccg aagcggcgcg ccggcacatc aagctggtga ccatcctgaa
     2221 cgacgtctcg ctgcgcaacc tcatcgtcgg cgagctggcc aagggcttcg gcttcttcca
     2281 cggcaagccc gccaccgcct tcgcgccggt cgccctcacg cccgacgagc tgggcgacgc
     2341 gtgggacggc gccaggctca acctgccgct gatctcgacc ttgaacggca aggaattcgg
     2401 ccatcccaac gccgccaccg acctcacctt cgacttcggc cagctgatcg ctcacgccgc
     2461 caggacgcgg cacctcgaag ccggcaccgt cgtcggctcg ggcacggtgg ccaaccgcga
     2521 tgcctcggtc ggctgctcct gcatcgccga gcgccgggtg cgcgaaacca tcgacagcgg
     2581 caaggccgtc acgccgttca tgaagttcgg cgatcggatc cgcatcgaaa tggtcgatcg
     2641 cgccggccag tcgatcttcg gcgccatcga ccagaaggtc gtgcgctaca cgccgcccgg
     2701 ctgagccatg ctaaggtggc cgcggaggcg gtcatgaagc ttatcggtta ttttcgctcg
     2761 tcggcggcgt ttcgcgtgcg tatcgggctc aacctcaagg gcatcgtcgt cgagcacgcc
     2821 gcgcgccatc tgcgcaaggg cgagcaggcg acgcccgact atgtcgcgct caatccccag
     2881 aaactcgtgc ccacgctggt gctcgattcg ggcgaggtgc tgacccagtc gctggccatc
     2941 ctggaatatc tcgaggagac gcaccccgag ccgccgttgc tgcccaggga tccggtcgat
     3001 cgggcacggg tgcgcgcgct ggcgctgatc accgccgccg acgtccatcc catccagaat
     3061 ctccgggtga tggcctatct gcgcgacaag ttcgggcaga ccgaggagag cgccttcgcc
     3121 tggtcgcgcc attggatcga gaccggcttc gatgcctacg aggcgtccgt cgccaaggac
     3181 cgccgcaccg gcgccttcag ccacggcgat cggccgagtc tggccgatct ctgcctcgtg
     3241 ccgcaggtct tcaacgcccg gcgcttcaag gtcgacatgg cgaaataccc gaccatccag
     3301 cgcatctacg ccacctgcat gaagcatccc gctttcgacg ccgcccagcc cgccaagcag
     3361 ccggatgccg aaccgtgagg aaaagcgttt tagcagttgt cggcctggtc gtgctcgccg
     3421 gcgcggccgt cgcggccgtg ccgatcctgg aagatcatgc cgcggggcgg atcaaagccg
     3481 agatagagcg cgacggcgtg tccaaggtgg gccaggtcga ggttgggctc ttcgaccgcc
     3541 gcatcacgct ggtcgatctc aagtcggcga gcagcggcgc cgagctcgcg gtcggccgtt
     3601 ggcaggcctc ggggttggct tggccgctgg ccgagttgct gcacgggcgc acgccgctcg
     3661 ccggcttccg ctggggcgac cctctgcagg ccgatcgcat cgagctgaaa gacgtgcacg
     3721 tcgtcgaccg cgccgccaac agcagttggg ccatggagtc gctggtcatc gacggcttcg
     3781 acctcgcccg cttcgatgcc aggtacgacg gcccctacgc cttccaggtc cgcaccgctc
     3841 gcgcgctggg tgcgctcacc atgcgccgcc tcgaggagcg caatctcctc atggtaatgc
     3901 cgggaacggg cgacactttc ggcgtggcat cggccgtcat cgatcgctac cagggcggcc
     3961 gcatcgccgc gatgacgatc accagcctcg aggccacggc gagggacggc caagccccct
     4021 tgttcaaggt gggcgagatc aaggcggcga gcctcgattg gagccgcccg atcgcgggcc
     4081 tgggctcgga caaatggtac cccggggcgt cgaccggtcg ggttcatatc gacaacgcca
     4141 gcgcgtcggg attcacgggc gacctgctcg cgcgctacgg catctcgctg ggcagcgtca
     4201 gtctcgagac ggtgcatgag aacgacaagc tcagccgctc gcggacccgc gtcgaaggct
     4261 tcgtgctggc gccgccgctg cgcggcctgg aaggtctgca gatgcgcctc gccttgacgt
     4321 cgatgggtct caaggaagtg aagctcgatt tggattgcac cagcaccgaa gaccgcgcca
     4381 aggatgagct cgccctcgac cgctgtggcc ttgtcggacc gggcctgggc gagatcgatc
     4441 tcagcgcgaa gatcgttcac gccgacccgg ctttctggcg cgccgtcgat gacggcgacg
     4501 tgctggcgct cagcgagtcg gaagcgggcc tgggatcggc gcggctggtg ctggtcgaca
     4561 agagcctgct cgagcgcggc ctgaaagcgc tgtcgacggt caccggccag ccggtctcgg
     4621 tgacgcggtc caatctggcc cgcgacatcc gccgctatca gcccgccggt gtgctgatct
     4681 ccgaagacat gaccaagctc ctcgacaccg tcgcgcgctt cgtcgagcaa ggcggcacgc
     4741 tcacgatcga tgccaagccc gagtcgccga tcaacctcga gcagctgcag accctgtgga
     4801 agccgggcgc cgacctcatg cgcctgctcg gcctgtcggc gagcttgtcg cgctagctgg
     4861 ggcgtgggct cattagcgcg gccaaattcg gactcagtcc ttgatgaacg ccagcgggtc
     4921 gacgttgatc gtgcctgctt gcgtggtggg catgccgtgc aggaaaccct tgtaggtctt
     4981 aagcgtcccg ttcttttgca gcttggccga caatggcccg gcgtcggcgt gggaagcggt
     5041 ctgactgatc gtcgtcgcca tgcctcacca gtaccggcac ggtgactttc ttgtgaaaag
     5101 gcgacgatgc catcgtaatg cgcctccgag gctttcacgc ccgggcggtt gaagccatag
     5161 aatggcccgt ccgggaggtc gcgatagaat tgcgagcgat
//
LOCUS       DASWGA010000759         1890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_725367, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000759 DASWGA010000000
VERSION     DASWGA010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_725367"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VF991_17765"
     CDS             complement(<1..388)
                     /locus_tag="VF991_17765"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX9558345.1"
                     /translation="MRQRTYKKLTPEQIARYERDGYICPVDAFPAERAHAWRERLEAF
                     ERAEGQKMTRGHNFKPHLLFPWVDEIVHAPEVLDAVEDLIGPDIRLFHLTVWPKDAGS
                     GTYVSWHQDATYFALEPACHVTAWVAL"
     gene            complement(390..1151)
                     /locus_tag="VF991_17770"
     CDS             complement(390..1151)
                     /locus_tag="VF991_17770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9558346.1"
                     /translation="MKLKDRVAIVTGAASGIGAASARLFAAEGARLALVDQDKVGLGQ
                     VATDIEAGGGSAIIIPADVSSDSEARSGVEQVMDKWGRIDVLLTAAGMSTGGTVDAIE
                     EAAWDRTFAVNVKGTYLWIHYAIQPMIAAKSGAIVTIGSQLAQSSPGKNAAYVASKGA
                     IASFTKTVAVDHAHQGIRVNALMPGVIDTPMPAKSLTRYPDPEAMKAWWKQRHPMGRI
                     GQPEEVARAALFLASDDSSFVTGTLLFVDGGWTAH"
     gene            1263..1769
                     /gene="msrB"
                     /locus_tag="VF991_17775"
     CDS             1263..1769
                     /gene="msrB"
                     /locus_tag="VF991_17775"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX9558347.1"
                     /translation="MFNRRQFATYSAVAAAATFVGAKFCAAAPPADRADAFEVTRSDA
                     EWRRLLTPAQYAVLRKSRTEPAGSSPLDGEKRAGTFHCAGCDLPLFSSATKFDSGTGW
                     PSFWQPLDDAIRTRKEGLPFIEQTEVHCRRCGGHLGHVFDDGPKPTGLRYCMNGIAMI
                     FKPAATRS"
BASE COUNT          304 a          643 c          619 g          324 t
ORIGIN      
        1 tgagcgccac ccaggcggtg acgtggcagg ccggttcgag cgcgaaatag gtcgcgtcct
       61 ggtgccagct cacataggtg ccggacccgg cgtccttggg ccagacggtg agatggaaca
      121 ggcggatgtc gggcccgatc agatcctcga ccgcgtccag cacctcgggc gcgtgcacga
      181 tctcgtcgac ccaagggaag agcagatgcg gcttgaaatt gtgaccgcgg gtcatcttct
      241 ggccctcggc gcgctcgaag gcttccagcc gttcgcgcca ggcatgcgcc cgctcggccg
      301 gaaaggcgtc gactgggcaa atgtatccgt cgcgttcgta gcgcgcgatc tgctcgggcg
      361 tgagcttctt gtatgtccgt tggcgcatgt cagtgcgccg tccagccgcc gtcgacgaac
      421 agcagcgtgc cggtgacgaa ggacgaatcg tcgcttgcca ggaacagcgc cgcccgcgcc
      481 acctcctcgg gctggccgat gcggcccatc ggatggcgct gcttccacca ggccttcatc
      541 gcctccggat cggggtagcg cgtgagcgac ttggccggca tgggcgtgtc gatgaccccc
      601 ggcatcagag cattcacccg gatcccctga tgggcatggt cgaccgcgac ggtcttggtg
      661 aaggaggcga tggcgccctt ggaggcgaca taggccgcgt tcttgcccgg gctcgattgt
      721 gcgagctgcg agccgatggt gacgatggcg cccgacttgg cggcgatcat cggctggatg
      781 gcgtaatgga tccagagata ggtgcccttg acgttgaccg cgaaggtgcg gtcccacgcc
      841 gcctcctcga tcgcatcgac cgtgccgccc gtcgacatgc cggctgccgt cagcagcacg
      901 tcgatgcggc cccatttgtc catgacctgc tcgacaccgc tacgcgcctc tgaatcgctg
      961 ctgacgtcgg cagggatgat tatggcgctg ccgccgcccg cctcgatatc ggttgcgacc
     1021 tggcccaggc ccactttgtc ctggtcgacc agggcaagcc tggcgccctc ggccgcgaac
     1081 aggcgggccg acgccgcgcc gatgcccgac gcggcgcccg tgacgatcgc aacccggtcc
     1141 ttgagcttca tacccgcaag tctagccggc ccgttttgcg accgcacgat aaagtgagcc
     1201 gtcgttgacc gacggccagc caatttccaa atagcgtgga acgcagagga gtggcgccta
     1261 tggtgttcaa ccgacgacaa ttcgccacgt acagcgctgt cgccgccgcc gcgaccttcg
     1321 tcggcgcgaa attttgcgcc gcggccccgc cggccgaccg ggccgacgcc ttcgaagtga
     1381 cgcgcagcga cgcggaatgg cgtcgcctgc tgacgccggc ccaatacgcc gtgctgcgca
     1441 agagcaggac cgagccggcc ggttccagcc cgctcgacgg cgagaagcgc gccggcacgt
     1501 ttcactgcgc tggctgcgac ctgccgcttt tctcctcggc caccaaattc gacagcggca
     1561 ccggttggcc cagtttctgg cagccgctcg acgatgcgat ccgtacccgc aaggagggat
     1621 tgccgttcat cgagcaaacc gaggtccatt gccggcgctg cggcggccac ctcggacacg
     1681 tgttcgacga cgggccgaag cccaccggcc tgcgctattg catgaacggc atcgccatga
     1741 tcttcaagcc ggccgcgaca cgctcatgaa aaaccagctc atgaaaacat cggccgtcct
     1801 cgcgtcgctg ctgatgctgg ttgcgttcgc agcggccgag gcccagacgc gcgccgttgc
     1861 ggttttcgcc ggcggctgct tctggtgcat
//
LOCUS       DASWGA010000760         2571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2368380, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000760 DASWGA010000000
VERSION     DASWGA010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2571
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2368380"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..638)
                     /locus_tag="VF991_17780"
     CDS             complement(<1..638)
                     /locus_tag="VF991_17780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015918141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558348.1"
                     /translation="MSVEFRDVVKRYGTATAVAGVSFTVEAGTLVTLLGPSGCGKTTT
                     LRMIAGLELPSAGRILIAGRDVTNLGATQRDVSMVFQSYALFPHMSVLDNVCYGLRRS
                     GLGRKEAADRARDGLAQVGLTGFEERQPSELSGGQQQRVAVARALVLEPAVLLFDEPL
                     SNLDARLRRQMREEIRELQQRLGLTVVYVTHDQQEAMAVSDRIIVMNAGRIE"
     gene            complement(635..>2571)
                     /locus_tag="VF991_17785"
     CDS             complement(635..>2571)
                     /locus_tag="VF991_17785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX9558349.1"
                     /translation="LASVAGLVLFVAQALGIGLRGWNAAGLNALFGELDGRQVGIGAG
                     GAVSLIALLALLSIGLALRGAFGGDAFVAGAVTAVAASILLFTAWPILRILVQAFHNG
                     DGAFEPALIAERLAVAKIWSLRCLVGGGSCGVAWNTLFLALACGTGTTALGLAFALIV
                     TRSSFRFKKTLRVLTVLPIITPPFVIGLALILVFGRSGLLNQLLEWSMGVPSTRWIYG
                     FGGVLLAQLFAFTPVAFLVLIGVVEGVSPTLEEASKTLRADPWATFATVSLPLMRPGL
                     ANAFLVGFIESIADFGNPIVLGGDYGVLSTEIYFAVVGAQLDYGRAAALAILLLALAL
                     GAFFLQRQVVGSRSYATISGKGDAGLPTPLPTAARRAAQWIALPWAVLTLLLYGFAFV
                     GGLVKVWGRDYTPTLDHYIKAFAVERTAEGLIWSGAAWNSFWTTLKLAAIAAPLTALL
                     GLLAAWLLVRQRFAGRATLEFATMLSFAVPGTVIGVAYVFAFNVPPIEITGTAMIIVI
                     CFVFRNMPVGVRAGMATMSQIDRSLDEASLTLRGRAPQTLLYIVLPLLRPAIVGALVY
                     GFVRAVTTVSAVVFLVTAEYELATTYIILRVINGDYGLAIAYSCALIGLMLAVILLIQ
                     LAVGERRLGRRVVPVQGGGT"
BASE COUNT          467 a          870 c          914 g          320 t
ORIGIN      
        1 tgctcgatgc ggccggcatt catgacgatg atgcggtcgg acaccgccat cgcctcctgc
       61 tggtcgtgcg tgacatagac cacggtgagg ccgagccgct gctgcagttc gcggatctcc
      121 tcacgcatct ggcggcgcag gcgggcatcg aggttgctga gcggctcgtc gaacagcagc
      181 accgcgggtt ccagcaccag agcccgcgcc accgcgacgc gctgctgctg gccgcccgac
      241 agttccgacg gctggcgctc ttcgaagcct gtcagcccga cctgcgccag cccgtcgcgc
      301 gcgcgatccg ccgcttcctt cctgccgagg ccggaacggc gcaggccgta acagacattg
      361 tccagcacgc tcatgtgcgg gaagagggcg taggactgga acaccatgct gacgtcgcgt
      421 tgcgtggcgc cgagattggt gacgtcacgg ccggcgatca ggatgcggcc cgcgctcggc
      481 agttcgagcc ccgcgatcat gcgcagcgtc gtggtcttgc cgcagcccga ggggccgagc
      541 agggtcacca gggtgccggc ctcgacggtg aagctgacgc ctgccaccgc ggtcgccgta
      601 ccgtagcgct tgacgacgtc gcggaactcg acgctcacgt gccgcctccc tgaactggca
      661 ccacacggcg gcccagccgg cgctcgccga ccgcgagctg gatcagcagg atgacggcca
      721 gcatgagccc gatcagcgcg cagctatagg cgatggcgag gccatagtcg ccgttgatca
      781 cgcgcaggat gatataggtg gtggcgagct cgtactcggc ggtgaccagg aacaccacgg
      841 cgctcaccgt cgtcaccgcg cgcacgaagc cgtagaccag ggcgccgacg atggcgggcc
      901 gcagcagcgg cagcacgata tagagcagcg tctgcggcgc gcggccgcgc agggtgagcg
      961 aggcttcgtc caggctgcgg tcgatctggc tcatcgtcgc catgccggcg cgaacgccga
     1021 ccggcatgtt cctgaagacg aagcagatga cgatgatcat ggcggtgccg gtgatctcga
     1081 tcggcggcac gttgaaggcg aagacatagg ccacgccgat caccgtgccg ggcacggcga
     1141 aggacagcat ggtggcgaat tcgagcgtgg cgcggccggc gaagcgctgg cgcaccagca
     1201 gccacgctgc cagcaggccg agcagcgctg tgaggggggc ggcgatggcg gcgagcttca
     1261 gcgtcgtcca gaacgagttc cacgcggcgc ccgaccagat cagtccttcg gccgtgcgct
     1321 cgaccgcgaa ggccttgatg tagtggtcga gcgtcggcgt gtagtcgcgg ccccagacct
     1381 tcaccagccc gccgacgaag gcgaagccgt agagcagcag ggtcaacacg gcccacggca
     1441 gcgcgatcca ttgggcggcg cgccgcgccg ctgtcggcag cggcgtcggc aggccggcat
     1501 cgcccttgcc cgagatggtg gcgtaggaac ggctgccgac gacctggcgc tgcagaaaga
     1561 acgcgccgag cgccagcgcc agcagcagga tcgcgagcgc ggcggcgcgc ccgtagtcga
     1621 gctgcgcgcc gaccaccgcg aagtatatct cggtcgacag cacgccgtag tcgccgccca
     1681 gcacgatggg gttgccgaaa tcggcgatgc tctcgatgaa gccgaccagg aaggcgttgg
     1741 ccaggccggg ccgcatcagc ggcagcgaca cggtggcgaa ggtcgcccac ggatcggcgc
     1801 gcaaggtctt cgaggcttcc tcgagcgtgg ggctcacacc ctcgacgaca ccgatcagca
     1861 cgaggaaggc gaccggcgtg aaggcgaaga gctgcgcgag caacacgccg ccgaagccgt
     1921 agatccagcg cgtcgatggc acgcccatcg accattcgag caactggttg agcaggccgg
     1981 agcggccgaa caccaggatc aacgccaggc cgatgacgaa aggcggggtg atgatgggca
     2041 gaacggtcag cacgcgcagc gtcttcttga accggaacga ggagcgcgtg acgatcaacg
     2101 cgaaagcgag gcccagcgcc gtcgtgcccg tgccgcaggc gagggcgaga aacagcgtat
     2161 tccacgccac gccgcagctt ccgccaccca ccaggcagcg caggctccag atcttggcga
     2221 cggccagacg ctcggcgatc agggcgggct cgaaggcgcc gtcgccgttg tggaacgcct
     2281 gcaccaggat ccgcaggatc ggccaggcgg tgaacaggag gatcgaggcg gcgacggccg
     2341 taacggcgcc cgcgacgaag gcgtctccgc cgaacgcgcc gcgcagcgcc agcccgatcg
     2401 acagcagggc gagcagggcg atgagggaga ccgcgccgcc ggcgccgatg ccgacctgcc
     2461 ttccgtccag ctccccgaac agcgcgttga gccccgccgc attccagccg cgcaggccga
     2521 tgccgagcgc ttgtgcgacg aacaggacga gacccgcgac gctcgccagc a
//
LOCUS       DASWGA010000761         2196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_214772, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000761 DASWGA010000000
VERSION     DASWGA010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214772"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VF991_17790"
     CDS             complement(<1..502)
                     /locus_tag="VF991_17790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9558350.1"
                     /translation="MIGDPIVRIEGVTKRFGAVTAVDRVDLAIERGELFALLGGSGCG
                     KTTLLRLLAGFETPDAGRVVIDGQDMTGVPPHRRPINMMFQSYALFPHMNVAENVGYG
                     LRREGLPKPEIATRVAEALEQVRLSDYAARRPAQLSGGQRQRVALARALVKRPKLLLL
                     DEPLAAL"
     gene            complement(624..1706)
                     /locus_tag="VF991_17795"
     CDS             complement(624..1706)
                     /locus_tag="VF991_17795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008189390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9558351.1"
                     /translation="MRLPVLAFLLVAAAAPAFGQGQVNVYNWSDYIAEAELKTFTKDT
                     GIKVNYTTYDSNEILDAKLKTGRSGYDVVVPTASPFFVRQLAAGLFLPIDKAKLKNYG
                     NLDPEIMAALAKYDPGNAHAVPWMWGTTGIGYNVAEIKKRLPGAPVDSLKMVFDPEVV
                     AKFKDCGVMMLDSATDVLPAALNYLGRDPDSKKPEDLAKAADVVKAVRPYIRKFHSSE
                     YINALAGGNICLVFGYSGDIFQARDRAAKASDRQDIAYAIPKEGSLLWIDVAAIPKDA
                     PDPNQALRFLDFMMEPKVAAASSELTGYANANKAATALLPKDISGNPLIYPPAAVRAR
                     FYTITAGNAEQVRERTRLWTTIKTGR"
     gene            complement(1723..>2196)
                     /locus_tag="VF991_17800"
     CDS             complement(1723..>2196)
                     /locus_tag="VF991_17800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9558352.1"
                     /translation="GIGLVPEGRQIFPNLTVRENLVAASANRLDASDPWTLEKIHALF
                     PRLAERTANMGNQLSGGEQQMLAIGRALMTNPKLLILDEATEGLAPLIRQEIWSCLGR
                     LKREGQAILVIDKNVGTLIGLADRHHVVEKGRVVWTGTSDALARDSELQHRYLGV"
BASE COUNT          361 a          682 c          765 g          388 t
ORIGIN      
        1 cgagggcggc cagcggctcg tcgagcagca ggagcttggg ccgcttgacc agcgcgcgcg
       61 cgagcgccac gcgctggcgc tggccgcccg agagctgcgc cggccgccgc gcggcgtagt
      121 ccgacagccg cacctgctcg agcgcctcgg cgacgcgcgt ggcgatctcc ggtttgggca
      181 ggccctcgcg gcgcagcccg tagcctacgt tctccgctac gttcatgtgc gggaagagcg
      241 cataggactg gaacatcatg ttgatcggcc ggcgatgcgg cggcacgccg gtcatgtcct
      301 ggccgtcgat cacgacccgg ccggcatcgg gcgtttcgaa gcctgccagc aggcgcagca
      361 aggtggtctt gccgcagccc gagccgccca gcagggcgaa cagctcgccg cgttcaatgg
      421 cgaggtcgac cctgtcgacg gcggtgaccg cgccgaagcg cttggtgacg ccctcgatgc
      481 ggacgatcgg gtcgccgatc aatctgaagc ccgttccaga tcaagggact cggactcttc
      541 cggaccgcga gcctccggct cgctcaaggt catgagcgag cgagacgctc gcggtccgga
      601 agagcatgaa agacaggaca ttcctaacgc cccgtcttga tggtggtcca cagccgcgtg
      661 cgctcgcgca cctgctcggc attgccggcg gtgatggtgt agaagcgggc gcgcacggcg
      721 gccggcgggt agatcagcgg attgccggaa atgtccttgg gcaagagcgc ggtcgcggcc
      781 ttgttggcgt tggcatagcc ggtgagttcg ctcgaggcgg ccgccacctt gggctccatc
      841 atgaagtcga ggaaacgcag cgcctggttg gggtcgggcg cgtctttggg gatggccgcg
      901 acgtcgatcc acagcagcga gccttccttg ggaatggcgt aggcgatgtc ctgccgatcg
      961 ctcgccttgg cggcacggtc gcgcgcctgg aagatgtcgc cggaatagcc gaacaccagg
     1021 cagatgtttc cgccggccag cgcgttgatg tactccgagg aatggaactt gcggatgtag
     1081 ggccgcaccg ctttcaccac gtcggccgcc ttggcgaggt cctcgggttt cttcgagtcg
     1141 ggatcgcgac cgagatagtt cagcgccgcc ggcaacacgt cggtggcgct gtcgagcatc
     1201 atgacgccgc aatccttgaa cttggcgacc acttctgggt cgaacaccat tttcagcgaa
     1261 tcgaccggcg cgccgggcag gcgtttcttg atttccgcga cgttgtagcc gatgcccgtg
     1321 gtgccccaca tccagggcac ggcgtgggcg ttgccgggat cgtacttggc gagcgccgcc
     1381 atgatctcgg gatcgagatt gccataattc ttgagcttgg ctttgtcgat tggcaggaac
     1441 aggccggcgg cgagctggcg gacgaagaac ggcgaggcgg tcggcaccac gacgtcgtag
     1501 cccgaccggc cggtcttgag cttggcgtcc agaatctcgt tggaatcgta ggtcgtgtag
     1561 ttgactttga tgccggtgtc cttcgtgaaa gtcttgagtt cggcttcggc gatatagtcc
     1621 gaccagttgt agacattgac ctgcccctgg ccgaaggcgg gcgccgcggc agcgacaaga
     1681 agaaaggcga ggacgggcag gcgcatccgg ggctccgcag gatcagacgc caagatatcg
     1741 atgctgcagc tcgctgtcgc gggccagcgc atcggacgtg ccggtccaga cgacgcggcc
     1801 cttctcgacg acatggtggc ggtcggccaa gccgatcagc gtgccgacgt tcttgtcgat
     1861 caccaggatc gcctggcctt cgcgcttcag ccggccaagg cacgaccaaa tctcctggcg
     1921 gatcaatggc gccaacccct cggtcgcctc gtcgaggatc aagagcttgg gattggtcat
     1981 cagcgcgcgg ccgatcgcca gcatctgctg ctcgccgccg gaaagctggt tgcccatgtt
     2041 ggcggtgcgt tcggcgagcc gcggaaacag ggcgtggatt ttttcaagcg tccagggatc
     2101 ggaggcgtcg aggcggttgg cggacgccgc gaccagattt tcccgcacgg tgaggttcgg
     2161 gaaaatctgc cgtccctccg gcacaaggcc gatgcc
//
LOCUS       DASWGA010000762         2437 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_88015, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000762 DASWGA010000000
VERSION     DASWGA010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88015"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VF991_17805"
     CDS             complement(<1..575)
                     /locus_tag="VF991_17805"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558353.1"
                     /translation="MRPAGVTNHLARMVIADDPVTSDADFERQLEAIDKSLEAAVDRV
                     MDAKPNAFILGISALSVWGGTLDWGEDLKRRVRKVAGWDIPVAIASDAVVAGLKAHAI
                     KRKIAIMEPYYPCIEPRLNAVLGAHGYEIVRLCHMRGKSPASYSVLTAQDMIKAARSI
                     DGPDVEAIVAFGANLPFARLADEAERWLDKPV"
     gene            796..>2437
                     /locus_tag="VF991_17810"
     CDS             796..>2437
                     /locus_tag="VF991_17810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9558354.1"
                     /translation="MAKPAQRKRTTRNRRGGLTRRELAMLPVAIGALASGRAEAQASL
                     AVENASLADVAQALAAGKITASALTRAYLARIDAYDRGGPGLNSVREINPDALSIAGR
                     LDGVKPSARQPLAGVPILVKDNIATGDKQHTTAGSLALASARAKDDATVVKRLRAAGA
                     VILGKANLTEFANIIATDMPSGYSSLGGQVKNPYSPSLLDDRGIPLVLPGGSSAGSAV
                     AVAAGLCAAAIGTETSGSLLSPASQNGVVTVKPTVGLISRAGILPISHSQDTAGPLTR
                     TVRDAAILLNVLAARDPADPATQPLQRPNDYTTGLDKDGLKGARIGVPSDPDDPLNDF
                     YMGKLPARSKAVMATALSVLADAGATIVRASMPTAGWIGGPGTTMGVLNRNPLSRRKG
                     EPATPSIVFLYELKHDLNLYLRDWATGTKIKTMADIIAFNQANADKALRFGQDLFLAA
                     QATRGDLSELEYRSARAMDLQAAKERGLDAYMTQHKLDAVVFSGTAGASIAAKAGYPS
                     VLVPAGFIGGLEGKETPDFPLGLTFAGRAWSEAKLLRLA"
BASE COUNT          388 a          853 c          822 g          374 t
ORIGIN      
        1 acgggtttgt cgagccagcg ctcggcttcg tcggccagcc tggcgaaggg cagattggcg
       61 ccgaaggcga cgatcgcctc gacatccggt ccgtcgatcg agcgggcggc cttgatcatg
      121 tcctgggcgg tcagcacgga gtacgacgcc gggctcttgc cgcgcatgtg gcagaggcga
      181 acgatctcat agccatgggc gcccagcacc gcattgaggc ggggttctat gcacggatag
      241 tagggctcca tgatggcgat cttgcgcttg atcgcgtgcg ccttgagacc ggcgacgacg
      301 gcgtcggagg caatcgcaac ggggatgtcc cagccggcga ccttgcgcac gcgtcgcttc
      361 aggtcttcgc cccagtcgag cgtgccgccc cacaccgaca gggcggatat gccgagaatg
      421 aacgcgttgg gcttggcgtc catgacccgg tcgacggcag cctcgagcga cttgtcgatg
      481 gcctcgagct gccgctcgaa atcggcatcg gaggtcacgg gatcgtcggc gatgaccatg
      541 cgcgccaggt ggttcgtcac acccgccggt ctcatgtcgt catattcggg ttggacgacg
      601 gtgttcgtcg acggcgtcgt cacgccgaag gcaaggcgct aggccaggta gtcgcgcacg
      661 gcgttcgctc ccttcttgtt gtccgaggtc gacccgcgag gatgccatcg cgactactcc
      721 ttgtccctgc gcttcgcgtg gctccgcagg gtgaggtatg gttggttgtg ctccagacac
      781 acggcagagg caggcatggc caaaccagct cagcgaaagc gaacgacccg caaccgccgc
      841 ggcggattga cccggcgcga gctcgccatg ctgccggtcg cgatcggcgc cctggcgtca
      901 gggcgcgccg aggcgcaggc cagcctggcc gtcgagaacg cctcgctcgc cgacgtggcc
      961 caggcccttg ccgccgggaa gatcaccgcc agtgctctca cgcgcgccta tctggcgcgc
     1021 atcgacgcct acgaccgtgg cggaccgggc ctcaattccg tgcgcgagat caatcccgac
     1081 gcgctgtcga tcgccggccg cctcgatggg gtcaagccgt cggcgcgcca accgctggcc
     1141 ggcgtgccga tcctggtcaa ggacaacatc gccaccggcg acaagcagca caccaccgca
     1201 gggtctctcg cgttggcgag tgcgcgcgcc aaggacgacg caacggtcgt caagcggctg
     1261 cgcgcggcgg gagcggtgat cctgggcaag gcgaacctca cggagttcgc caacatcatc
     1321 gcgaccgaca tgccctcggg ctacagctcg ctgggcggcc aggtgaagaa cccgtactcg
     1381 ccgtccctgc tcgacgatcg tggcatcccg ctcgtactgc cgggcggttc gagcgcgggc
     1441 tccgccgtcg ccgtcgcggc cggcctctgc gcggcggcga tcggcaccga gacctcgggc
     1501 tcgctgctca gcccggcgtc gcagaacggc gtggtcaccg tgaagcccac ggtcgggctt
     1561 ataagccgcg ccggcatcct gccgatctcg cacagccagg acaccgccgg tccgctgacc
     1621 cgcaccgtgc gcgatgcggc gatcctgttg aacgtgctgg cggcgcgcga tccggccgat
     1681 cccgcgacgc agcccctgca gcggcccaac gactacacca cgggcctcga caaggatgga
     1741 ctgaagggcg cgcgcatcgg cgtgccgagc gatcccgacg atcccctgaa cgatttctac
     1801 atgggcaagt tgccggcgcg ctccaaggcg gtgatggcga cggccctctc ggtcttggct
     1861 gacgccggcg ccaccatcgt gcgggccagc atgccgaccg cgggctggat cggcgggccc
     1921 ggcacgacca tgggcgtgct gaaccgcaat ccgctcagcc ggcgcaaggg cgagccggcc
     1981 acgccatcga tcgtgttcct ctacgagctc aagcacgatc tcaatctcta tctgcgcgac
     2041 tgggcgaccg gcacgaagat caagaccatg gccgacatca tcgccttcaa ccaggccaac
     2101 gccgacaagg cgctgcgctt cggccaggac ctcttcctcg ccgcccaggc cacgcgcggc
     2161 gacctgtcgg agctggaata tcgctcggcg cgggccatgg acctgcaggc cgccaaggag
     2221 cgcgggctcg atgcctacat gacccagcac aagctcgatg ccgtggtgtt ttccggcacg
     2281 gcgggtgcct ccatcgcggc caaggcgggc tatcccagcg tcctggtgcc ggccggcttc
     2341 atcggcgggc tcgaaggcaa ggagacgccg gactttccgc tcggcctcac cttcgccggc
     2401 cgcgcctgga gcgaggccaa gctgctgcga ctggcct
//
LOCUS       DASWGA010000763         4166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1101535, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000763 DASWGA010000000
VERSION     DASWGA010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4166
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1101535"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VF991_17815"
     CDS             complement(<1..393)
                     /locus_tag="VF991_17815"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9558355.1"
                     /translation="MLRIIAAALAAVLLLPQAEAQAQAWPAKPIRFVIPFGAGSASDA
                     LARIAGQELEQTLGQPVIVIQKPGADGALAAGEVKRAAPDGYTFLFGTNSPLAVAPNM
                     QKDPPYNVLADFTPVTFLGDNTFFIVVHP"
     gene            complement(586..1791)
                     /locus_tag="VF991_17820"
     CDS             complement(586..1791)
                     /locus_tag="VF991_17820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558356.1"
                     /translation="MKYGKAALAAVLSCCLLGVPALAQNNAVKIGVLDDMSGPYAENT
                     GPGDVASARMAIADFGGSVLGKPIELVSADFQSKVDVGVGIAKRWYDEDVDMIIGIPN
                     SAIALALVKVAEEKNRIVMPTAAATSELTGKSCGSHSIHWIYDTYGQGKTIVTALTKQ
                     GGDTWFFITVDYAFGLAVEADATSFIKAAGGKVLGSARHPLNSQDFSSYVVQAQASKA
                     KGLMFANGGNDIINGVKQAAEFGLVKQGMRISAPLMQFPDVHGVGLKVAQGLLMASPF
                     YWDMNLEARAFSDRFTKEMGRPPSFIQAGTYGAVLHYLRAVKAAGTDEAKAVLAEMKK
                     LPINDFMTKDGKVREDGRVIRDMYLMQVKTPEESKGEWDLAKIIATVPGNEAFRPLAD
                     GGCPLVGKK"
     gene            complement(2078..2320)
                     /locus_tag="VF991_17825"
     CDS             complement(2078..2320)
                     /locus_tag="VF991_17825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558357.1"
                     /translation="MVAGLCVATSSNAQSTTSDAAYCQSLVKAYAKGGNAKGSLPVGN
                     ATAVAIGQCQEGNPGPAIPVLEQKLRDNNIAVPARS"
     gene            2807..3958
                     /locus_tag="VF991_17830"
     CDS             2807..3958
                     /locus_tag="VF991_17830"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEX9558358.1"
                     /translation="MKKPPIVRKPTAVFHQTGALEVGRGKITGVIALALGGLAVLSVL
                     AFHFPEYLTTPDLRKKYDVNVLREILLVGMVIAGGLALSNLIQRRNRWLNATALALIG
                     LAVAMGGHRVTIGDFPDNTPYIGLDWFILDLLGSSMVFILIEKMFPLHREQPVFRPHW
                     QIDFTHFIVNHLLVGLALLVVNFAIHRLFGWLVYGPLQKWIGGLPFFAELFLVLLVAD
                     LVQYWTHRAYHEIPFLWRFHAVHHSAEYMDWMAGSRLHLFELLTTRVSILGVLYVLGF
                     TEAAMNVYIIVVGFQAVFNHANVALPGAFARAPLKWLIVTPDFHHWHHSSEREAIDRN
                     YAAHFAFIDYLFGTAVKSDRRFPGKYGVLGDYMPASYLKQQLFPFTWKH"
     gene            complement(3976..>4166)
                     /locus_tag="VF991_17835"
     CDS             complement(3976..>4166)
                     /locus_tag="VF991_17835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent acyl-CoA ligase"
                     /protein_id="HEX9558359.1"
                     /translation="LFRHCSERLAYYKAPGWIHIVPSLPTTGTQKIQKHAIYPVGTDP
                     RAHADVIDMRGLKRRQRT"
BASE COUNT          669 a         1354 c         1338 g          805 t
ORIGIN      
        1 gggatgaacg acgatgaaga aggtgttgtc gccgagaaag gtgaccggcg tgaaatcggc
       61 gaggacgttg tagggcgggt ctttctgcat gttcggggcg accgcgagcg ggctgttggt
      121 gccgaacagg aaggtatagc cgtcgggcgc cgcgcgcttg acctcgccgg cggcgagggc
      181 cccgtcggcc cccggctttt ggatcacgat gaccggctgg ccgagcgtct gctccagttc
      241 ctggccagcg atgcgggcca gcgcgtcgct tgccgaaccc gcgccgaacg gaatgacgaa
      301 cctgatcggc ttcgccggcc aggcctgtgc ctgcgcctcg gcctgcggca gcaacaggac
      361 cgcggcaagc gccgcggcga tgatcctcag cataggagcc tccccccgtc ccgtcgtccc
      421 gaccaaggcc tgaagggccg cgtggaggga ccttgcgtca acgattagct gcaagtcgtc
      481 gagagaaggt ccctcgactg cgccgcccta agggcggctt cgctcgggac gacggatcga
      541 gctgaagtca tcccgctcta gcctcttgat ggcgcgcagc catctctact tctttcccac
      601 cagcggacag ccgccgtcgg ccagcggccg gaacgcctcg ttgcccggca ccgtggcgat
      661 gatcttcgcc aggtcccatt cgcccttcga ctcctcgggc gtcttgacct gcatcaggta
      721 catgtcgcgg atgacgcggc catcctcgcg aaccttgccg tccttggtca tgaagtcgtt
      781 gatcggcagt ttcttcatct cggccagcac ggccttggct tcgtcggtgc cggcggcctt
      841 cacggccctg aggtagtgca gcacggcgcc gtaggtgccg gcctggatga agctgggcgg
      901 ccggcccatc tccttggtga agcggtctga gaaggcgcgc gcctcgagat tcatgtccca
      961 gtagaacggg ctcgccatca acaggccttg cgccaccttc aggccgacgc cgtggacgtc
     1021 cgggaactgc atcagcggcg cgctgatccg catgccctgc ttgaccaggc cgaactcggc
     1081 cgcctgcttc accccgttga tgatgtcgtt gccgccgttg gcgaacatca accccttggc
     1141 cttcgaggcc tgcgcctgca cgacgtagga ggagaagtct tggctgttca gcggatggcg
     1201 cgccgagcct aaaaccttgc cgccggccgc cttgatgaag ctggtggcgt cggcttccac
     1261 cgccaggccg aaggcgtagt cgacggtgat gaagaaccag gtatcgccgc cctgcttggt
     1321 gagcgccgtg acgatggtct tgccctggcc gtaggtgtcg tagatccaat ggatgctgtg
     1381 gctgccgcag cttttgccgg tcagctccga ggtcgccgcc gcggtcggca tgacgatgcg
     1441 gttcttctct tcggcgacct tcaccagggc gagcgcgatc gccgagttcg ggatgccgat
     1501 gatcatgtcg acgtcttcgt cgtaccaacg cttggcgatg ccgacgccga catccacctt
     1561 gctctggaaa tccgcactca ccagctcgat cggcttgccg agcaccgagc cgccgaaatc
     1621 ggcgatggcc atcctggccg aggcgacgtc gccggggccg gtgttctcgg catagggccc
     1681 ggacatgtca tccagcacgc cgatcttcac ggcattgttc tgggccagcg ccgggacgcc
     1741 gagcaggcag caggacagca ctgccgccaa agcggccttc ccgtatttca tcgtttccac
     1801 ccggtcgtct attgttgggg caatcctagc tcattgccgg gagcgcgcca ctcatggtct
     1861 tccggactcg gcgcattcac atgcgcctga gggcatcccg cccgctcatg atcaagaggc
     1921 gggcggaacc cttcgcgcaa ggaagactca agataaaagg cgatgggctc agcgagccga
     1981 aggcgattcg gcgtttgtgg cggcgcagct tcgccgccgg gtcacctgtc ggccgcggcg
     2041 gcgaagcctt tgtctcaggg ggaggagacg gtgtgcgtca gctccgcgcc ggcacggcga
     2101 tgttgttgtc gcgcagcttc tgctcgagca ccgggatcgc cgggccggga ttgccctctt
     2161 ggcactggcc gatcgcgacg gcggtcgcgt tgccgactgg aaggctaccc ttcgcgttgc
     2221 cgcccttcgc gtaagccttg acgagcgact ggcaataggc cgcatcgctc gttgtcgact
     2281 gggcgttgct gctcgtggcc acgcacaggc cggcgaccaa acaggcggtc gcagcggcca
     2341 aaagtgagat ggacctgttc atctggagga cccttcgcag tttgccggga acgcccgatt
     2401 gcttcccgcg cctgtcgaag actctaccgc cgggtgccag gctttattcc gtcatctgcg
     2461 acacgccgcg tgtggcaaag ctcacagaac tcgccaagcg cgcatggtca aaggaagcgt
     2521 cgcgttgagc ctcaggaggc gagcatggaa gaccgggccg ggaagcagag ctcagggacg
     2581 aatggcacgt cctgcaccct ggattggccg acaccggaaa tgctccgggc ggcgcgtggc
     2641 gccaaggcca aggcgttgtg ggacatggcg ttggcctttg ggcgttggct gaagcggagg
     2701 gcagcccagc ccgttttcgc cgccagccga tctcccgtcg gccaccattg aggtccggcg
     2761 aaatgctcga tgcaaccaac gccggttgca cctacacttg gcgcccatga agaagccacc
     2821 catcgtccgc aagcctaccg ccgtctttca ccagacgggt gccctcgaag tggggcgcgg
     2881 caagatcacc ggcgtgatcg ccctggcctt gggcgggctc gccgtgttgt cggtgctggc
     2941 cttccatttc cccgagtacc tgacgacgcc ggacctgcgg aagaaatacg acgtcaacgt
     3001 cctgcgtgag attctgctgg tcggcatggt gattgccggc ggcctcgccc tgtcgaacct
     3061 gatccagcgg cgcaatcgct ggctgaacgc cacggcgctg gcgctgattg gcctcgccgt
     3121 ggcgatgggc ggccatcgcg tgacgatcgg cgactttccc gacaacacgc cctatatcgg
     3181 cctcgactgg ttcatcctcg acctgctggg ctccagcatg gtgttcatcc tgatcgagaa
     3241 gatgttcccg ctgcatcgcg agcagccggt attccggccg cattggcaga tcgactttac
     3301 ccatttcatc gtcaaccacc tgctcgtcgg actggcgctg ctggtcgtca atttcgccat
     3361 ccaccgtctg ttcggctggc tggtctatgg gccgctgcag aaatggatcg gtggcctgcc
     3421 gttcttcgcc gagttgttcc tggtgctgct ggtcgccgat ctggtgcagt actggacgca
     3481 ccgcgcctat cacgagatcc cgttcctgtg gcgctttcac gccgtgcacc acagcgccga
     3541 atacatggac tggatggcgg gctcgcggct gcacctgttc gagctgctga cgacgcgcgt
     3601 ctccatcctg ggcgtgctgt atgtgctggg cttcaccgag gccgcgatga acgtctacat
     3661 catcgtcgtc ggcttccagg cggtgttcaa ccacgccaac gtggcgctgc ctggcgcgtt
     3721 cgcccgcgca ccgctcaagt ggctgatcgt gacacccgat ttccatcatt ggcatcacag
     3781 ctccgagcgc gaggcgatcg accgcaacta cgccgctcac ttcgctttta tcgattacct
     3841 gttcggcacg gcggtgaagt cggaccgccg ctttcccggc aaatatggcg tgctgggcga
     3901 ctacatgccg gcgagttacc tcaagcaaca gcttttcccc ttcacctgga aacactaacg
     3961 ggcgccggct gtcgactacg tgcgctgacg ccgcttcaag cctcgcatgt cgatgacgtc
     4021 ggcgtgcgcc cgtggatcgg taccgacggg ataaatggcg tgcttttgaa tcttctgggt
     4081 tcccgtggtc ggcaggcttg gcacgatgtg gatccagccc ggtgccttgt agtaggcgag
     4141 ccgctccgag caatggcgga acagca
//
LOCUS       DASWGA010000764        10767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2369055, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000764 DASWGA010000000
VERSION     DASWGA010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10767
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2369055"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VF991_17840"
     CDS             <1..666
                     /locus_tag="VF991_17840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory UreF family protein"
                     /protein_id="HEX9558360.1"
                     /translation="YRLLAWLSPAYPIGAFSYSHGIETAVEEGFIKDRATLVSWLQSV
                     LRHGTGAVDGALFAASWRAAATEDWPAFDLVAERAAAWRGTSEMALESRQQGGSFLSM
                     TRTAWPHRALDAVHERLGGELSLPVAVALAAAAHGIVLEQAIGGYLHAFTANLISAAL
                     RTVPLGQSDGQLALSALESSVNAAAQAAMVADSLDDVGTSTPLLDWCSLRHETQYTRL
                     FRS"
     gene            663..1082
                     /locus_tag="VF991_17845"
     CDS             663..1082
                     /locus_tag="VF991_17845"
                     /inference="COORDINATES: protein motif:HMM:NF024559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3995 domain-containing protein"
                     /protein_id="HEX9558361.1"
                     /translation="MTLPIALSLVLALLAAAHAWWATGGIWPSASEPALARAVIGDGR
                     SRMPPPWQCAAVAGALAVVAAWPWAIMAWPDDSFVLIGSIVVGAIFFLRGTAGYSARW
                     RRRFTAEPFRTRDFYLYSPLCLALGVGFFALLTREMG"
     gene            1082..1717
                     /gene="ureG"
                     /locus_tag="VF991_17850"
     CDS             1082..1717
                     /gene="ureG"
                     /locus_tag="VF991_17850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HEX9558362.1"
                     /translation="MDGRGPLRVGVGGPVGSGKTALVERLCKKMRDDYDIAVVTNDIY
                     TKEDAEFLTRAGALAPERIVGVETGGCPHTAIREDASINLAAVSDIVRKWPKLEIVFV
                     ESGGDNLAATFSPELADLTIYVIDVAAGEKIPRKGGPGITRSDLLVINKIDLAPLVGA
                     NLDVMDRDARKMRGTRPFLFSNLKENKGVDDIAAFIVRQGGLPARQVTRVK"
     gene            1735..2304
                     /locus_tag="VF991_17855"
     CDS             1735..2304
                     /locus_tag="VF991_17855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HEX9558363.1"
                     /translation="MSRTICLSLLLLAIAGPALAHPGHEGSGFLHPFTGIDHLLVMVG
                     VGLWAALLATRKPALSFLVPASFLVMMAVGAAAGFAGIKLPLAEAAILASVFVIGGLL
                     MGGVRMPAASAMAVVGLFALFHGYAHALEAPATAAGAYILGFLSATALLQGLGLGLGW
                     VVRRALGDLGLRALGGMVLAGGALVLITN"
     gene            2398..3690
                     /gene="urtA"
                     /locus_tag="VF991_17860"
     CDS             2398..3690
                     /gene="urtA"
                     /locus_tag="VF991_17860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008197160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033219 - urea binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter substrate-binding protein"
                     /protein_id="HEX9558364.1"
                     /translation="MKLGSVMRTGLVAAGLLAGAAGSAFAQGAPIKVGILHSLSGTMA
                     ISETTLKDVMLMLIEEQNKKGGVLGRKLEAVVVDPASNWPLFAEKARELLQKDKVAAV
                     FGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEESQRNVFYTGAAPNQQAIPAVDYLMQ
                     NEKVQRWVLAGTDYVYPRTTNKVLEAYLKLKGVKQEDIMINYTPFGHSDWQSIVAEIK
                     KFGSAGKKTAVVSTINGDANVPFYKELGNAGIKAKDIPVVAFSVGEEELAGVDTKPLV
                     GHLAAWNYFQSVKNPGNEAFIKTWQSFTKNPKRVTNDPMEAHVVGFAMWIEAVKKAGT
                     TDPDAVIDAIVGISVPNLTGGYSAMMPNHHITKPVLIGEIQGNGQFDTVWQTSGTVVA
                     NEWSPYLPDSKDLIADWRKPMNCGNFNVVTGKCGGKGK"
     gene            3783..5393
                     /gene="urtB"
                     /locus_tag="VF991_17865"
     CDS             3783..5393
                     /gene="urtB"
                     /locus_tag="VF991_17865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006334792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HEX9558365.1"
                     /translation="MLFLRSLAGLLSALASLLIAGMALAVDLPVLVANLTTGSFGDRE
                     TAVGALAASGDARAAPILDALAAGQLYVRKSDNTVVIGKPDGNQLALTEAISGKPAGS
                     GSEAELDRVRVNNRLRGVIEAAVGSLTLMSPDARVRREAADALFKRRDASSLAALDQA
                     LAVEKDPRIKRIMSEARAASVLASDAPPAQRLEAIALVRERGDRDALGVLQATASSSD
                     GEVKAAATAGAEAVRQTLAAWEAAQNVWYGISLGSVLLLAAIGLAITFGTMGVINMAH
                     GEMVMLGAYTTFVVQEVIRTSAPHLFDASLVIALPLAFLVSGGIGILIERGIIRFLYG
                     RPLDTLLATWGLSLVLQQAVRSIFGPSNREVGAPSWMSGAFQVGQLNITYGRLWIVVF
                     ALVVFFALILLLRRTPLGLYMRAVTQNRPMAAAMGIRTPRVDALTFGLGSGIAGLAGV
                     ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLFGTLVGATALGIVNKFLEPYAGAVLG
                     KILVLVFIILFIQRRPRGLFALKGRAVE"
     gene            5390..6508
                     /gene="urtC"
                     /locus_tag="VF991_17870"
     CDS             5390..6508
                     /gene="urtC"
                     /locus_tag="VF991_17870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007762134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HEX9558366.1"
                     /translation="MITRFLWQGMGRNLRLFVLLVLAVGIILPLLNQLLPSNSPFYVP
                     AWALQLIGKYLCFASLALAVDLVWGYCGILTLGHAAFFALGGYCMGMYLMRQIGSRGV
                     YGNPILPDFMVFLNYKELPWFWHGFDQFWFAAIMVVIVPSLLALALGWFAFRSRVTGV
                     YLSIITQAMTFALLLAFFRNDMGLGGNNGMTDFKDILGFSVQADGTRAVLCFASALAL
                     AIFLVIAGAVVGSRFGKALTAVRDAESRMRFLGYRVEGYKLFVFVLSAAMAGVAGALY
                     VPQVGIINPSEFSPGNSIEAVLWVAVGGRGTLIGPVIGAFIVNFGKTWLTGALPEVWL
                     FVLGAMFIAVTLLLPKGVVGLWAQIRTRGATHKARAPA"
     gene            6531..7277
                     /gene="urtD"
                     /locus_tag="VF991_17875"
     CDS             6531..7277
                     /gene="urtD"
                     /locus_tag="VF991_17875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019858307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding protein UrtD"
                     /protein_id="HEX9558367.1"
                     /translation="MRSTSALLYLSGVTVSFDGFKALNNLSLLVEPGEMRAIIGPNGA
                     GKTTMMDVVTGKTRPDEGEVVFDGRADLTKLDETDIATLGIGRKFQKPTVFENHTVRD
                     NLLLALAGLRSWYRLLLAAPTKAENDRLEEILSIIRMGPQQHMLGARLSHGQKQWLEI
                     GMLLAQDPKLLLVDEPVAGMTDVETETTAHVLREINRTHSVVVVEHDMSFVRALGVKV
                     TVLHEGSMLAEGTLEQVSADPRVVEVYLGR"
     gene            7420..8115
                     /gene="urtE"
                     /locus_tag="VF991_17880"
     CDS             7420..8115
                     /gene="urtE"
                     /locus_tag="VF991_17880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding subunit UrtE"
                     /protein_id="HEX9558368.1"
                     /translation="MLAVQNVDLFYGAAQALRSVSLSAALGRVTCLLGRNGVGKTSLL
                     RAICGLYPIAAGSITLDGADVSRMPPYERARRGVAMVPQGREIFPLLTVKENLETGFA
                     PLGRDQKKIPDEVFELFPVLGSMLRRRGGDLSGGQQQQLAIGRALTMRPKLLVLDEPT
                     EGIQPSVIKDIGRAITFLRQRGDMAILLVEQYLDFAHELADDFAVMDRGEIVMAGSRD
                     NFDSEAVRRHMTV"
     gene            8160..9287
                     /locus_tag="VF991_17885"
     CDS             8160..9287
                     /locus_tag="VF991_17885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HEX9558369.1"
                     /translation="MAQPLLFTPLKLRGVTAPNRSVVSPMVQYRASDGQVNDYHLVHL
                     GKFALGKFGIVFTENCAIEPRGRVTQGDLGMWDDSQIAGHKRLVAFIKGEGALAGTQI
                     THSGRKGSTPRSFDKPGQLGPAGASWQKWEVVGPSELSAAEGWPIPRQLGVAEIEKLV
                     QKFGEAAKRADAAGYDVIEIHGAHGYLLAQFLSPISNTRNDQYGGDRAGRMRFPLAAA
                     RAVRSNWPDHKPMFIRVSTVDGAGGWEVEDTVVFAKALKELGVDVIDCSSGGLTGLST
                     ALPVKRSLGFQVPFAAAVKRQAGIATMAVGLILDGPQAEAILQAGDADLIAIGRQALY
                     DPFWALHAAQELGCDADFAMWTPEYGWWLDKRKNNLVGLKK"
     gene            9307..10521
                     /locus_tag="VF991_17890"
     CDS             9307..10521
                     /locus_tag="VF991_17890"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9558370.1"
                     /translation="MTGILAGLRIVEGSAFIAAPLGGMTLAQLGADVIRFDDIKGGLD
                     NDRWPITQDGRSIYWAGLNKGKRSIAVDLRSPRGRELLSALITAPGEGAGIFTTNMPA
                     RGWLAYEALAKKRADLIALNIVGARDGSAHVDYTVNAITGFPLVTGPVDHDGPVNAVA
                     PPWDLATAYAGAMAILAAERHRRLTGQGQRIVLPLQDMALAATSALGYIGEAVINQVD
                     RPRFGNEIFGTFGRDFKTRDGRFVMICIFSDRHVDALAAAGGFAEAFRKVEATKGVDL
                     KTDAGRWNARAELCALIEPWVAAHTAAEIRAALKKAGALWAPYQSFRELAADQENLLD
                     NPMFTMLDQPGIGRYPVAASPLQFGAAPRQPPKTAPMLGQHTDEILSGILGLPDHEIA
                     KLHDDKVIGGPR"
     gene            10508..>10767
                     /locus_tag="VF991_17895"
     CDS             10508..>10767
                     /locus_tag="VF991_17895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX9558371.1"
                     /translation="MDRDRVLIAGGGIGGLAAALGLAQKGIASLVLEKAAQLGEIGAG
                     IQLGPNAFHCFDRLGVGEAARAMAVYIDTLRLMDAMADGEIT"
BASE COUNT         1656 a         3653 c         3603 g         1855 t
ORIGIN      
        1 tatcgcctgc tggcctggct gtcgcccgcc tatccgatcg gcgccttcag ttatagccac
       61 ggcatcgaaa cggcggtcga ggagggtttc atcaaggacc gcgccacgct ggtcagctgg
      121 ctgcagagcg tgctgcgtca cggcaccggc gccgtcgacg gcgcgttgtt cgccgcatcg
      181 tggcgggcgg ccgctaccga ggactggccc gccttcgacc ttgtcgccga gcgcgcggcc
      241 gcctggcgcg gcacgtcgga aatggcgctg gagtcccgcc agcagggcgg ctcgttcctg
      301 tccatgacgc gcaccgcctg gccgcatcgc gcgctcgatg ccgtgcatga gagattgggc
      361 ggcgaactgt cgctgccggt cgccgtggcg ctggcggccg cggcgcatgg catcgtcctg
      421 gaacaggcca ttggcggcta cctgcacgct ttcaccgcca acctgatctc ggccgcgctg
      481 cgcaccgtgc cgctcggcca aagcgatggg caattggcgc tgtccgcctt ggaaagttcc
      541 gtgaacgcgg cggcccaagc ggctatggtc gcggactcgc tcgacgacgt cggcaccagc
      601 acaccgctgc tcgactggtg ctcgcttcgg cacgagacgc agtatacgag gctgtttcgg
      661 tcatgaccct ccccatcgcc ctctcgctcg tgctggcgct gctggccgcc gcgcacgcct
      721 ggtgggcgac gggcgggatc tggccctcgg ccagcgagcc cgcgctggcg cgcgccgtga
      781 tcggcgatgg ccgcagccgc atgccgccgc cctggcaatg cgcggccgtg gcgggagcac
      841 tggccgtcgt cgcggcctgg ccgtgggcga tcatggcgtg gccggatgat tctttcgtcc
      901 tgatcgggtc gatcgtggtc ggcgccatct tctttctgcg cggcaccgcg ggctatagcg
      961 cgcgttggcg gcgacggttc acggccgagc cgttccgcac ccgcgacttc tacctctatt
     1021 cgccgctctg cctggccctg ggcgtgggct ttttcgcgct gctgacgcgg gagatggggt
     1081 gatggacggg cgcggcccct tgcgcgtcgg cgtcggcggt ccggtcggtt cgggcaagac
     1141 cgcgctggtc gagcgcctgt gcaagaagat gcgcgacgac tacgacatcg ccgtcgtcac
     1201 caacgacatc tacaccaagg aagacgccga gttcctgact cgcgccggcg cgctcgcgcc
     1261 cgagcgcatc gtcggcgtgg agaccggcgg ctgtccgcac accgcgatcc gcgaggatgc
     1321 ctcgatcaac ctcgccgcgg tgtcggacat cgtgcgcaag tggcccaagc tcgagatcgt
     1381 gttcgtcgaa tcgggcggcg acaatctcgc cgccaccttc tcgcccgagc tggccgacct
     1441 cacgatctat gtgatcgacg tggcggccgg cgagaagatc ccgcgcaagg gcgggcccgg
     1501 catcacgcgc tccgacctgc tggtgatcaa caagatcgac ctggcgccgc tggtcggcgc
     1561 caaccttgac gtcatggacc gcgacgcgcg caagatgcgg gggacccggc cgttcctctt
     1621 ttccaatctc aaggaaaaca agggcgtcga cgacatcgcc gccttcatcg tgcgccaggg
     1681 cggcctgccg gcgcgtcaag tgacccgcgt gaagtgatca aggagtaggt gacgatgtct
     1741 cgaacgatct gcctttccct cctgctgctg gccatcgccg gcccggcgct ggcccatccc
     1801 ggccatgaag ggtcgggctt cctccatccc ttcaccggca tcgaccatct cctggtcatg
     1861 gtcggcgtcg gcctgtgggc ggcgctgctg gccacgcgca agcccgcgct gtcgttcctg
     1921 gtgccggctt cctttctggt gatgatggcg gtcggagcag ctgccggttt tgcgggcata
     1981 aaactgcctc ttgcagaggc ggcgatcctg gcctcggttt tcgtgatcgg cggcctcctc
     2041 atgggtgggg tgcgtatgcc ggcggcctcg gccatggcgg tggtcggcct gttcgccctg
     2101 ttccacggct acgcccatgc cctcgaagcg ccggccacgg cggccggcgc ctacatcttg
     2161 gggttcctgt cggcaacggc cctgcttcaa ggtctcggcc tgggactcgg ctgggttgtg
     2221 aggcgagccc tcggcgacct gggattgcgc gcgctgggcg gcatggtcct ggccggcggc
     2281 gcgctggtcc tgatcaccaa ttaaaattta tcccggccat tagccggggt ttggcacggc
     2341 tttcgctctc tcccgttttg gcgggggtat tccgtcgaag aaatcaagga gagcgggatg
     2401 aaattgggat ctgtgatgag gacgggcctc gtggccgccg gcctgttggc cggggcggcg
     2461 ggaagcgcct tcgcgcaagg cgcgccgatc aaggtcggta ttctgcattc actgtccggc
     2521 acgatggcga tcagcgagac gacgctgaag gacgtcatgc tgatgctgat cgaggagcag
     2581 aacaagaagg gcggcgtgct cggccgcaag ctcgaggccg tggtcgtcga tccggcgtcg
     2641 aactggccgc tgttcgccga gaaggcgcgc gagcttctgc agaaggacaa ggtcgcggcg
     2701 gtgttcggct gctggacgtc ggtcagccgc aagtcggtgc tgccggtgtt cgaggagctg
     2761 aacggtctgc tgttctatcc cgtccagtac gagggcgagg aaagccagcg caacgtgttc
     2821 tacaccggcg cggcgcccaa ccagcaggcg atcccggcgg tcgactacct gatgcagaac
     2881 gagaaggtgc agcgctgggt gctggccggc accgactacg tctatccgcg cacgaccaac
     2941 aaggtcctcg aggcgtacct caagctgaag ggcgtcaagc aggaagacat catgatcaac
     3001 tacacgccgt tcggtcattc cgactggcag tcgatcgtgg cggagatcaa gaagttcggc
     3061 tcggccggca agaagaccgc cgtcgtgtcg accataaacg gcgatgccaa cgtgccgttc
     3121 tacaaggaac tgggcaacgc cggcatcaag gccaaggaca tccccgtggt ggccttctcg
     3181 gtcggcgagg aagagctcgc cggtgtcgac accaagccgc tggtcggcca tctcgccgcc
     3241 tggaactatt tccagtcggt caagaacccg ggcaacgagg ccttcatcaa gacctggcag
     3301 agcttcacca agaatcccaa gcgggtaacc aacgatccga tggaagccca tgtcgtcggc
     3361 ttcgccatgt ggatcgaggc ggtgaagaaa gccggcacga ccgatccgga cgcggtgatc
     3421 gacgccatcg tcggcatctc ggtgccgaac ctgaccggtg gctactcggc gatgatgccg
     3481 aaccaccaca tcaccaagcc ggtgctgatc ggcgagatcc agggcaacgg ccagttcgac
     3541 acggtgtggc agacctccgg cacggtggtc gccaacgagt ggtcgcccta cctgccggac
     3601 tccaaggacc tgatcgccga ttggcgcaag ccgatgaact gcggcaactt caacgtcgtc
     3661 accggcaagt gcggcggcaa gggcaagtag cccctcgcac cggcaactcg actccggtaa
     3721 ctaacagggg gcggggcgac tttcgagtcg ccccgttctc gtctccgggt taattctcag
     3781 ccatgctctt cctgcgctcg ctcgcggggc tgttgtcggc gctggcctcg ctgttgatcg
     3841 ccggcatggc cttggctgta gaccttccgg ttctcgtggc caatctcacg accggcagtt
     3901 tcggcgatcg cgagacggcg gtcggcgcgc tggccgcctc gggcgatgcc cgcgccgcgc
     3961 ccattctcga cgccctggcg gcgggccagc tctatgtccg caagtccgac aatacggtgg
     4021 tcatcggcaa gccggacggc aaccagctcg ctctgacgga ggcgatctcc ggcaagccgg
     4081 ccggcagcgg ctcggaagcc gagctcgacc gcgtccgcgt caacaaccgc ctgcgcggcg
     4141 tcatcgaggc cgcggtcggc tcgctcacct tgatgagccc cgacgccagg gtccggcgcg
     4201 aggccgccga cgcgctgttc aagcggcgcg atgcctcgtc gctggccgcc ctcgaccagg
     4261 cgctcgccgt cgagaaggat ccgcgcatca agcgcatcat gagcgaggcc cgcgccgcca
     4321 gcgtgctcgc ctccgacgcg ccgccggcgc agaggctcga ggccatcgcg ctggtgcgcg
     4381 agcgcggcga tcgcgatgcc ttgggcgtgc tgcaggcgac cgcctcgtcg tccgacggcg
     4441 aggtcaaggc ggcggcaacc gccggcgccg aagcggtgcg ccagacgctc gccgcctggg
     4501 aagccgcgca gaacgtctgg tacggcatct cgctcggctc ggtgttgctg ttggcggcga
     4561 tcgggctggc catcaccttc ggcaccatgg gcgtgatcaa catggcgcat ggcgagatgg
     4621 tgatgctggg cgcctacacg accttcgtcg tccaggaagt gatccgcacg tcggcgccgc
     4681 acctgttcga cgcctcgctg gtgatcgcgc tgccgctggc cttcctggtc tccggcggca
     4741 tcggcatcct gatcgagcgc ggcatcatcc gcttcctcta cggcaggccg ctcgataccc
     4801 tgctggccac ctggggcctg tcgctggtgc tgcagcaggc ggtgcgctcg attttcggcc
     4861 cgtccaaccg cgaggtcggt gcgccgtcgt ggatgtcggg ggccttccag gtgggccagc
     4921 tcaacatcac ctacggccgc ctgtggatcg tcgtgttcgc gctcgtggtg ttcttcgccc
     4981 tgatcctgtt gctgcgccgc acgccgctcg gcctctacat gcgggccgtc acccagaacc
     5041 gcccgatggc cgcggccatg ggcatccgca cgccccgggt cgacgcgctc accttcggcc
     5101 tgggctcggg catcgccggc ctggccggcg tggcgctcag ccaaatcgac aatgtcagcc
     5161 ccaatctcgg ccagggttac atcatcgact ccttcatggt cgtggtgttc ggcggcgtcg
     5221 gtaacctgtt cggcacgctg gtcggcgcca ccgcgctcgg catcgtcaac aaattcctcg
     5281 aaccctatgc cggcgcggtg ctgggcaaga tcctggtgct ggtgttcatc atcctgttca
     5341 tccagcgccg cccgcgcggc ctgttcgcac tcaagggccg ggcggtcgaa tgatcacgcg
     5401 cttcctgtgg cagggcatgg gccgcaactt gcgcctgttc gtgctgctgg tgctggcggt
     5461 cggcatcatc ctgccgctct tgaatcagct cctgccgtcc aacagtccgt tctacgtgcc
     5521 ggcctgggcg ctgcagctca tcggcaagta cctctgtttc gcctcgctgg cactcgcggt
     5581 cgatctcgtg tggggctact gcggcatcct cacgctcggc cacgccgcct tcttcgcgct
     5641 gggcggctac tgcatgggca tgtacctgat gcgccagatc ggcagccgcg gcgtctacgg
     5701 caatccgatc ctgcccgact tcatggtgtt cctgaactac aaggagctgc cctggttctg
     5761 gcacggcttc gaccagttct ggttcgccgc tatcatggtc gtcatcgtgc cgagcctgtt
     5821 ggcgctggcg ctgggctggt tcgccttcag gagccgcgtc accggcgtct atctctcgat
     5881 catcacccag gcgatgacat tcgccctgct gttggccttc ttccgcaacg acatgggtct
     5941 gggcggcaac aacggcatga ccgacttcaa ggacatactg ggcttctccg tgcaggccga
     6001 cggcacgcgc gccgtgctgt gctttgcgtc ggccttggcg ctggcgatct tcctggtgat
     6061 cgccggtgcc gtcgtcggct cacgcttcgg caaggcgctg acggcggtgc gcgacgccga
     6121 aagccgcatg cgcttcctcg gttaccgggt cgagggttat aagctcttcg tcttcgtgct
     6181 gtcggcggcc atggcgggcg tcgcgggggc gctctatgtg ccgcaggtcg gcatcatcaa
     6241 tcccagcgag ttctcgcccg gcaactcgat cgaggcagtg ctttgggtcg ccgtcggcgg
     6301 ccgtggcacc ctgatcggtc cggtgatcgg cgccttcatc gtcaacttcg gcaagacctg
     6361 gctgaccggc gccctgcccg aggtctggct gttcgtgctg ggcgcgatgt tcatcgccgt
     6421 cacgctgttg ctgcccaagg gcgtcgtcgg gctgtgggct cagatccgca cgcgcggtgc
     6481 cacgcataag gcgagggccc ccgcatgagg acaggggcat gacagacgcc atgagaagca
     6541 cctcggcgct gctctatctc agcggcgtca ccgtctcgtt cgacggcttc aaggcgctga
     6601 acaatctctc cctgctggtc gagcccggcg agatgcgcgc catcatcggc cccaacggcg
     6661 ccggcaagac caccatgatg gacgtcgtca ccggcaagac tcggcccgac gagggcgagg
     6721 tggtgttcga cggccgcgcc gacctcacca agctcgacga gaccgacatc gccacgctcg
     6781 gcatcgggcg gaagttccag aagcccaccg tgttcgagaa ccacacggtg cgcgacaatc
     6841 tcctgctggc gctggccggc ctgcgcagct ggtatcgtct cttgctggcg gcaccgacca
     6901 aggccgagaa cgaccggctg gaggagatcc tgtcgatcat ccgcatgggc ccgcagcagc
     6961 acatgctggg cgcgcgtctc agccacggcc agaagcagtg gctcgagatc ggcatgctgc
     7021 tcgcccagga ccccaagctc ctgctggtcg acgagccggt ggccggcatg accgacgtcg
     7081 agaccgagac caccgcgcat gtgctgcgcg agatcaaccg cactcactcc gtcgtcgtag
     7141 tcgagcatga catgagcttc gtgcgcgcgc tcggcgtcaa ggtgacggtg ctgcacgagg
     7201 gctcgatgct ggccgagggt acgctcgagc aggtgagcgc cgatcccagg gtcgtcgaag
     7261 tctatctcgg gcgctgaata agatgctgac ggttcgcaac gtatcatcgt cttccggacc
     7321 gcgcgcgtcc cgcgcgctca tgatcatgag cgcgcgggac gcgcgcggtc cggatgagca
     7381 tgacctgatt caagccaatc gcaacgggct ctgacgaaca tgctcgcggt ccagaatgtc
     7441 gatctcttct acggcgccgc ccaggcgctg cgctcggtct cgctcagcgc cgccctgggc
     7501 cgggtgacct gcctgctggg acgcaacggc gtcggcaaga ccagcctgct gcgcgcgatt
     7561 tgcggcctgt atccgatcgc cgccggatcg ataacgctcg acggcgccga cgtctcgcgc
     7621 atgccgccct atgagcgggc gcggcgcggc gtcgccatgg tgccgcaggg tcgcgagatc
     7681 ttcccgctcc tgacggtcaa ggagaatctc gagaccggtt tcgcgccgct cggccgcgac
     7741 cagaagaaga tccccgacga ggtgttcgag ctcttcccgg tgctgggttc gatgctgcgg
     7801 cggcgcggcg gcgacctgtc gggcggccag cagcagcagc tcgccatcgg ccgcgccctc
     7861 accatgcggc ccaagctcct ggtgctcgac gagccgaccg aaggcatcca gccgtcggtg
     7921 atcaaggata tcggccgcgc catcaccttc ctgcgccagc gcggcgacat ggcaattctg
     7981 ctggtcgaac aatatctcga tttcgcccat gaactggccg acgatttcgc cgtcatggac
     8041 aggggcgaga tcgtgatggc cggcagccgc gacaatttcg atagcgaagc cgtgcgccgt
     8101 cacatgacgg tgtgagcggc cggctctatt gtcctccccg aacacccggg gatccctgct
     8161 tggcacaacc gcttctcttc acgccgctga aattgcgcgg cgtcaccgcg cccaaccgct
     8221 cggtcgtctc gcccatggtg cagtatcgcg ctagcgacgg gcaggtgaac gactaccact
     8281 tggttcatct cggcaagttc gcgctcggca agttcggcat cgtcttcacc gagaactgcg
     8341 ccatcgagcc tcggggccgc gtcacccagg gcgacctcgg aatgtgggac gacagccaga
     8401 tcgccggcca caagcggctg gtcgccttca tcaagggcga gggcgcgctc gccggcacgc
     8461 agatcaccca ttccggccgc aagggctcaa cgccgcgctc gttcgacaag ccgggccagc
     8521 tcgggccggc gggcgcgagc tggcagaaat gggaagtggt cggcccctcc gagctgtcgg
     8581 cggccgaagg ctggccaata ccccggcagc tcggcgtcgc cgagatcgag aagctggtgc
     8641 agaagttcgg cgaagccgcg aagcgcgccg atgctgcggg ctatgacgtc atcgagatcc
     8701 acggtgcgca cggctatctg ctggcgcagt tcctgtcgcc gatcagcaac acgcgcaacg
     8761 atcagtatgg cggcgaccgc gccggccgca tgcgctttcc gctcgccgcg gcgcgcgcgg
     8821 tgcgctcgaa ctggcccgac cacaagccga tgttcatcag agtctcgacg gtcgatggcg
     8881 cgggcggctg ggaggtcgag gacacggtgg tgttcgccaa ggcgctgaag gagctgggcg
     8941 tcgatgtgat cgactgttcc tcgggcgggc tcaccggcct gtcgacggcg ttgccggtca
     9001 aacgctcgct cggtttccag gtgccgttcg ccgcggcggt gaagcgccag gcgggtatcg
     9061 ccaccatggc agtcggcctg atcctcgatg ggccgcaggc cgaagcgatc ctgcaggcgg
     9121 gcgacgccga cctgatcgcc atcggccgcc aggctctcta cgatccgttc tgggcgttgc
     9181 atgcggcaca agagctgggc tgcgacgccg acttcgcgat gtggacgccc gagtacggct
     9241 ggtggctgga caagcgcaag aacaacctcg tcggcctcaa gaagtaaaga caacgggaaa
     9301 cgcacgatga caggcattct cgccggcctt cgcatcgtcg aaggctcggc gttcatcgcc
     9361 gcccctctgg gcgggatgac gctcgcccag ctgggcgccg acgtgatccg cttcgacgac
     9421 atcaagggcg ggctcgacaa cgaccgctgg ccgatcaccc aggacggccg ctcgatctat
     9481 tgggctggct tgaacaaggg caagcgctcg atcgccgtcg acctgcgctc gccgcgcggc
     9541 cgcgagcttc tgagcgcgct gatcaccgcg ccgggcgagg gcgccggcat cttcaccacc
     9601 aacatgccgg cgcgcggctg gcttgcctac gaggcactcg ccaagaagcg cgccgacctg
     9661 atcgcgctca atatcgtggg cgcgcgcgac ggcagcgccc atgtcgacta cacggtgaac
     9721 gccatcaccg gctttcccct ggtgaccggc ccggtggacc atgacgggcc ggtcaacgcc
     9781 gtggcgccgc cgtgggacct cgccaccgcc tatgccggcg ccatggcgat cctggcggcc
     9841 gaacggcacc ggcggctgac cgggcaaggg cagcggatcg tgctcccgct gcaggacatg
     9901 gcgctcgccg cgacctcggc gctgggctac atcggcgagg cggtgatcaa ccaggtcgac
     9961 cggccgcggt tcggcaacga gatcttcggc accttcggcc gcgacttcaa aaccagggac
    10021 ggccgcttcg tcatgatctg cattttctcc gatcgccatg tcgacgccct ggcggcggcc
    10081 ggcggcttcg ccgaggcctt caggaaagtc gaggccacca agggcgtcga cctcaagacc
    10141 gacgccggcc gctggaacgc ccgcgccgag ctctgcgccc tcatcgagcc gtgggtggcc
    10201 gcgcatacgg cagcggaaat ccgcgcggca cttaagaaag cgggtgcgct gtgggcgccc
    10261 taccagagct tccgcgaact ggcggccgac caggaaaacc tgctcgacaa tccgatgttc
    10321 accatgctcg accagccggg catcggccgc tatccggtcg ccgcctcgcc cttgcagttc
    10381 ggcgcggccc cgcgccagcc gccgaagacg gcgcccatgc tcggccagca taccgacgag
    10441 atcctgtcgg gcatcctcgg actgcccgac cacgagatcg ccaagctcca tgacgacaag
    10501 gtgataggtg gaccgcgata gggtcctgat cgccggcggc ggcatcggcg ggttggccgc
    10561 ggcgctcggg ctggcccaaa agggcatcgc ctcgctggtg ctggagaagg ccgcgcaact
    10621 gggcgagatc ggcgccggca tccagctcgg gcccaatgct ttccactgtt tcgaccggct
    10681 gggcgtcggc gaagccgcgc gcgccatggc cgtctacatc gacacgctgc ggttgatgga
    10741 cgccatggcc gatggcgaga tcactca
//
LOCUS       DASWGA010000765         3223 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1347923, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000765 DASWGA010000000
VERSION     DASWGA010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1347923"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VF991_17900"
     CDS             complement(<1..446)
                     /locus_tag="VF991_17900"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9558372.1"
                     /translation="MTIEIDVVIPTLNTGERLARTLATLRGDHGFALSITVCDGGSHD
                     NSQAIARHAGATVVTTEAGRGRQLATGAAAGSAPWLLFLHADTALAPGWTDDATRFVS
                     EAANAARAGYFRLRLDSPDPRARRIERLAAWRCRTFGLPYGDQGLL"
     gene            complement(443..1336)
                     /locus_tag="VF991_17905"
     CDS             complement(443..1336)
                     /locus_tag="VF991_17905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX9558373.1"
                     /translation="MTAKGEERAQVGLRALETLWFNTGTLCNLTCRNCYIESSPRNDR
                     LVYLTAAEVATYLDEIERDGHATRLIGFTGGEPFMNPELPAMLDDVLSRGFTAMVLTN
                     AMKPMHKMKPELLSLLGRHGRNLTLRVSVDHYSPTLHEAERGARSWQPTLDGLVWLAE
                     AGFDVHVAGRRFSGESEHQVRAGYARLFAELGVAIDASNPMTLVLFPEMDATVDVPEI
                     TTACWGILKKSPDSVMCASARMVVKRKGADRPAVVACTLLPYDPQFELGHTLADGIGA
                     VRLNHPHCAKFCVLGGAACSQ"
     gene            1488..2078
                     /locus_tag="VF991_17910"
     CDS             1488..2078
                     /locus_tag="VF991_17910"
                     /EC_number="1.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010972362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonic semialdehyde reductase"
                     /protein_id="HEX9558374.1"
                     /translation="MLDDPSLDKIFRNARTHNGWLPKPVTDQQLRDIYEVMKWGPTSS
                     NSQPIRIIFIRTQEGKEKLRPALSSGNTAKTMDAPVTAVVAYDTQFYEHLPRTFPHNP
                     TAITWFKGESQKAVAEATAFRNGTLQGAYLIIAARSLGLDCGAMSGFDNAKVDAAFFP
                     DGRFKSNFLCNIGYGDHSKLFDRSPRLPFEEVCTLA"
     gene            complement(2081..2776)
                     /locus_tag="VF991_17915"
     CDS             complement(2081..2776)
                     /locus_tag="VF991_17915"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HEX9558375.1"
                     /translation="MNVPGFVFNPISLAIEGAAIGFLIAVPVGPAAALCIRRTITVGA
                     VAGYMTGIGAALGDAVFGAVAAFGLSFVEEFVIKREAWLLAIGGIGLVIMGWTTMRHR
                     PRTVGDPVADDREHRVATHFHYASSSFFITVFNPLTVMAFGAAFAGRNLAGVGASLPD
                     AALLVTAVFCGALAWWTIICFAAVALRARFTGTGLLWLNRCAGAIILGFGLVALISLL
                     PLPWRQIGRAVGL"
     gene            complement(2784..>3223)
                     /locus_tag="VF991_17920"
     CDS             complement(2784..>3223)
                     /locus_tag="VF991_17920"
                     /inference="COORDINATES: protein motif:HMM:NF020132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX9558376.1"
                     /translation="ELVTPNHFELEHLVGRKVSTMAEALAAARSLLGGPRLALITSLR
                     RADAPDDQVEMVAVSRDAAWRVSTPLIGFEVAPNGTGDAVAAMFCAHWLESGDVAAAL
                     GKAASSIFAVLETTRALGERELQLVAAQDRLVAPPRRFTPEKV"
BASE COUNT          576 a         1084 c         1079 g          484 t
ORIGIN      
        1 atcagcaggc cctggtcgcc atagggcagg ccgaaggtcc ggcatcgcca cgcggcgagg
       61 cgttcgatcc ggcgggcgcg ggggtcgggc gaatccagac gcagccggaa gtagccggcc
      121 ctcgcggcat tcgcagcctc cgacacgaag cgtgttgcgt catccgtcca gcctggcgcc
      181 agcgccgtgt cggcatgcag gaagagcagc cacggcgctg agcccgcggc cgcgccggtt
      241 gcaagctgcc gaccgcgacc agcttccgtc gtgacgaccg tggcgccggc gtggcgggca
      301 atcgcctggc tgttgtcatg cgagccgccg tcgcaaaccg tgatggacag ggcgaaaccg
      361 tgatcgccgc gtagcgtggc cagcgtgcgc gcgagcctct ctcctgtgtt caaggtcggg
      421 atgacgacgt cgatttcgat cgtcactggc tgcaggcggc gccgcccagc acgcagaact
      481 tggcgcaatg cggatggttg aggcgcactg cgccgatgcc gtcggcaagg gtgtggccca
      541 actcgaactg cggatcgtag ggcagcagcg tgcaggcgac gaccgccggc cggtcggcgc
      601 ccttgcgctt caccaccatg cgggccgagg cgcacatcac gctgtcgggc gattttttca
      661 ggatgcccca gcatgccgtg gtgatctccg gcacatcgac cgtggcgtcc atctcgggaa
      721 acagcaccag ggtcatcggg ttgctggcat cgatggccac gccgagttcg gcgaacagcc
      781 gcgcatagcc cgcgcgcact tgatgctccg attcgccgga aaatcgccgc ccggcgacgt
      841 ggacgtcgaa acctgcctcg gccagccaga cgagtccgtc gagcgtcggc tgccagctcc
      901 gggcgccgcg ttcggcctcg tgcagcgtcg ggctgtagtg atcgaccgag acccgcaagg
      961 tgagattgcg gccgtgccgt cccagcagac taagcaattc gggcttcatc ttgtgcatcg
     1021 gcttcatggc gttggtcagc accatggccg tgaagccgcg cgacaacaca tcatcgagca
     1081 tcgccggcag ctcgggattc atgaaaggct cgccgccggt gaagccgatc agccgggtgg
     1141 catgcccgtc gcgctcgatc tcgtcgaggt aggtcgcgac ttcggccgcc gtgagataga
     1201 ccaggcgatc gttgcgcggc gaggattcga tgtagcagtt gcggcacgtg aggttgcaca
     1261 gcgtgccggt gttgaaccac agcgtctcga gcgctcgcag gccgacctgc gcgcgctctt
     1321 cgcccttggc ggtcaccagc gcatccttga attttgcggg gtcgagcaga acgggcagcc
     1381 tccagagggt cctgcgtcac attgccggga aggctagcat aatacctcgt cggctcgacc
     1441 cattggacga gcttcgctac ggttcactcg aatatgaggt gaagtgaatg ctcgacgatc
     1501 cgtcgctcga caagattttt cgcaatgccc ggacgcacaa tggctggctg cccaagccgg
     1561 tcaccgatca gcagctgcgc gacatctacg aggtcatgaa atgggggcca acctcgtcga
     1621 attcgcagcc gatccggatc attttcatcc gcacccagga aggcaaggag aagctgcggc
     1681 cggccttgag cagcggcaac acggcaaaaa ccatggatgc gccagtgacc gcggtcgtcg
     1741 cctacgacac ccagttctat gagcacctgc cgcgcacctt tccgcacaat ccgacggcca
     1801 tcacctggtt caagggcgaa agccagaagg ccgtcgccga ggccaccgcc ttccgcaacg
     1861 gcacgctgca gggcgcctac ttgatcatcg ccgcgcgctc gctgggtttg gactgcggcg
     1921 ccatgagcgg cttcgacaat gccaaggtcg atgcggcctt cttccccgac ggacgcttca
     1981 agtctaactt cctgtgcaat atcggctacg gcgatcattc caaactgttc gaccgcagcc
     2041 cgcgcctgcc gttcgaggag gtctgcacgc tggcctgagc ctataggccg acggcgcggc
     2101 cgatctgccg ccacggcagc ggcaagagcg agatcagcgc caccaggccg aagcccagga
     2161 tgatggcgcc ggcgcagcgg ttcagccaca gaaggccggt gccggtgaag cgcgcgcgca
     2221 acgccacggc cgcgaagcag atgatcgtcc accaggcgag ggcaccgcag aacaccgccg
     2281 tcaccagcag ggcggcgtcc ggcaggctgg cgccgacgcc ggcgaggttg cggccggcga
     2341 aggccgcgcc aaaggccatc acggtgagcg gattgaacac ggtgatgaaa aagctcgagc
     2401 tggcatagtg aaaatgcgtc gccacccggt gttcgcggtc gtcggcgacc gggtcgccga
     2461 cggtgcgcgg ccgatggcgc atcgtcgtcc agcccatgat caccaggccg atgccgccga
     2521 tggcgagcag ccaggcttcg cgcttgatca cgaactcctc gacgaaggac agcccgaacg
     2581 ccgccacggc gccgaacacc gcgtcgccca gcgccgcgcc gatgccggtc atgtagcccg
     2641 ccaccgcgcc gacggtgatc gtccggcgga tgcacagcgc cgccgccggt ccgaccggca
     2701 cggcgatcag gaagccgatg gcggcgccct cgatggcaag cgaaatcgga ttgaagacga
     2761 agcccggaac gttcatcgcc tggctagact ttctcgggcg taaagcgacg cggcggggcg
     2821 accagccgat cctgcgccgc caccagctgc agctcgcgct cgccgagcgc gcgcgtggtc
     2881 tcgagcacgg cgaagatcga cgaagcggcc ttgccgaggg ccgcggcaac gtcgccgctt
     2941 tcgagccaat gggcgcagaa catcgcagcc accgcatcgc cggttccgtt gggcgcgacc
     3001 tcgaacccga tcaagggcgt ggaaacccgc cacgccgcgt cgcggctcac cgccaccatc
     3061 tcgacctggt cgtctggcgc atcggcgcga cgcaggctgg tgatcaaggc aagccgcggg
     3121 ccaccgagca ggctgcgcgc ggcggccagc gcctcggcca tggtcgagac cttgcggccg
     3181 acgagatgct ccagctcgaa gtggttgggg gtcaccagct cgg
//
LOCUS       DASWGA010000766         1852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2489669, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000766 DASWGA010000000
VERSION     DASWGA010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2489669"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..955
                     /locus_tag="VF991_17925"
     CDS             <1..955
                     /locus_tag="VF991_17925"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX9558377.1"
                     /translation="ITGVFSLTRQAIQLGYLPRMEIQHTSETAIGQIYIPRVNWLLMG
                     GVIALVVGFGSSGALAGAYGLAVTGAMLVDATLAMAVAILVWRWPWPLAVLVFGLLAV
                     PDLAFFIANALKIPDGGWLPLVVAAFIYFTITTWRRGRALVATEVSEGALPLRQFLGR
                     MERVPDRVAGTAVFLTADASRTPAAFLHNLKHNKVLHERIVILQVDTMDVPRVPATNR
                     VECDRLGKGFYTVIARYGFTEQPDVPEALRACRPHGIAYDEMETSFFLGRETLVPSQH
                     SRLGKWRRDWFISLFQSASATKTFFRIPPNRAIELGNQIQI"
     gene            965..1663
                     /locus_tag="VF991_17930"
     CDS             965..1663
                     /locus_tag="VF991_17930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9558378.1"
                     /translation="MPRTTLVLLPGLLNTRRVFEHQIEALSDVADCIVPELWHYESIG
                     AMAEATLAIAPKSFALCGFSMGGYVAFEIMRRARERVERLALVDTQAAPDSPESIARR
                     HGLMEQSHIGRFHGVQPSMLPHIVHPSHVKDPAITQPILDMAREIGADGFLREQTAIS
                     ARLDSRPLLVDIEVPTVVIVGRQDQSTPLVRAEEMAADIATSRLVVIEQSGHMSPLEQ
                     PTDVTAALRRWLSQ"
     gene            1660..>1852
                     /locus_tag="VF991_17935"
     CDS             1660..>1852
                     /locus_tag="VF991_17935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9558379.1"
                     /translation="MNTVYAREDYLGADEYIDVVRKSGLVRPIDDRGRVERMLAHANL
                     IVTARQDGRLVGFARSLTDF"
BASE COUNT          286 a          656 c          587 g          323 t
ORIGIN      
        1 catcaccggc gtgttctcgc tcacccgcca ggcgatccag ctcggctacc tgccgcgcat
       61 ggagatccag cacacgtcgg agacggcgat cggccagatc tacatcccgc gcgtcaactg
      121 gctgctgatg ggcggcgtga tcgccctggt ggtgggcttc ggctcatcgg gcgcgctggc
      181 cggcgcctat ggtctggccg tcaccggcgc catgctggtc gacgccaccc tcgccatggc
      241 ggtggcgatc ctggtgtggc gctggccgtg gccgctcgct gtcctggtgt tcggcctgct
      301 ggccgttccc gacctcgcct tcttcatcgc caacgcactc aagatccccg atggcggctg
      361 gctgccgctg gtggtcgcgg ccttcatcta cttcaccatc accacctggc ggcgcggacg
      421 ggcgctggtg gccaccgagg tcagcgaggg tgcgctgccg ctgcgccaat tcctcgggcg
      481 catggagcgc gtgcccgatc gggtcgccgg caccgcggtg ttcctgaccg ccgacgccag
      541 ccgcacgccg gccgccttcc tgcacaatct caagcacaac aaggtgctgc acgagcgcat
      601 cgtcatcctc caggtcgata ccatggacgt gccgcgcgtg cctgccacca accgtgtgga
      661 gtgcgaccgc ctgggcaagg gcttttatac ggtgatcgcc cgctacggtt tcaccgagca
      721 gcccgacgtg cccgaggcgt tgcgcgcctg ccggccgcac ggcatcgcct acgacgagat
      781 ggagaccagc ttcttcctcg gccgcgagac cctggtgccg agccagcatt cgaggctcgg
      841 caaatggcgg cgcgactggt tcatctcgct cttccagtcg gcttcggcca ccaagacctt
      901 cttccgtatc ccgccgaacc gggctatcga actgggcaac cagatccaga tctgacgatt
      961 ggcgatgccc cgaacgacgc tcgttttgct gcccggcctg ttgaacacgc gccgggtctt
     1021 cgagcaccag atcgaggcgc tatccgacgt cgccgactgc atcgtacccg agctctggca
     1081 ctacgaatcg ataggcgcca tggccgaggc cacgcttgcc atcgcgccca aaagcttcgc
     1141 gctctgcggc ttctcgatgg gcggctatgt cgccttcgag atcatgcgcc gcgcccgtga
     1201 gcgcgtcgaa cggctggcgc tggtcgacac ccaagccgca cccgactcgc cggaatcgat
     1261 cgcgcgccgt cacggcttga tggagcagag ccacatcggc cgcttccacg gcgtgcagcc
     1321 ctcgatgctg ccgcacatcg tccacccctc gcatgtcaaa gatcccgcca tcacccagcc
     1381 catcctcgac atggcgcgcg aaatcggcgc tgacggtttc ctgcgagagc agacggccat
     1441 cagcgcgcgg ctcgacagcc ggccgctgct ggttgacatc gaggtaccca cggtggtgat
     1501 cgtcggccgc caggaccagt cgacgccgct ggttcgcgcc gaggagatgg ccgccgacat
     1561 cgcgacctcg cggctggtgg tgatcgagca aagcgggcat atgagcccgc tcgagcagcc
     1621 gaccgacgtg actgcagcgc tgaggagatg gttgagccaa tgaacactgt ctacgcccgc
     1681 gaggactatc tcggcgcgga tgagtatatc gacgtcgtgc gcaaatcggg cctcgtccgg
     1741 ccgatcgacg atcgcggccg ggtcgagcgc atgctggctc atgccaacct gatcgtgacg
     1801 gcgcgccagg atggccggct ggtgggcttc gcccgctccc tgaccgattt tt
//
LOCUS       DASWGA010000767         3740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1860143, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000767 DASWGA010000000
VERSION     DASWGA010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3740
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1860143"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..913
                     /locus_tag="VF991_17940"
     CDS             <1..913
                     /locus_tag="VF991_17940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HEX9558380.1"
                     /translation="MLIGAHLVEASDIYFYLRDEYPACREILVREIAALDAAGLLAGA
                     RVHLRRGAGAYICGEESAMIESIEGKRGLPRNRPPLPYQVGIFGRPTLINNVETLYWV
                     RDLVERGPEWWQGQGRNGRKGLHVYSVSGRVVDPGVKIAPAGVTVRELIDEFCGGMLE
                     GHAFKAYVPGGPSSGILPAALGEVPLDFGTLEAHGSFIGSAAVVILSDRDDIREAAIN
                     LMRFFQDESCGQCTPCRVGTEKAVKLMAARGWDKALLDELSVAMRDASICGLGQAAPN
                     SMTSVMTHFAAEVGIAPGKSPASGASR"
     gene            910..3678
                     /gene="fdhF"
                     /locus_tag="VF991_17945"
     CDS             910..3678
                     /gene="fdhF"
                     /locus_tag="VF991_17945"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HEX9558381.1"
                     /translation="MSGIKFSIDGVEVEAREGETIWQVANRHDVAIPHLCYSTAPTYR
                     PDGNCRACMVEIEGERVLAASCLRQPTAGMKVGVATRRAEASRRMVFELLVADQPARA
                     TSHDPDSKFWNWADKVGVTTSRFPADQRPASDTSHPAMAVNLDACIECNLCVRACREV
                     QVNDVIGMAGRGHHEKIVFDFDDPMGDSSCVACGECVQACPTGALMPASLLDHAQTRT
                     QWADREVDSLCPFCGVGCQLTYHIKDDKILHVSGKDGPANRARLCVKGRFGYDYANHP
                     DRLTVPLVRKDGVPKSAEDDVDPANPWTHFREATWEEAMERAAAGLIEIRERKGGPGL
                     AGFGSAKGSNEEAYLFQKLVRTGFGTNNVDHCTRLCHASSVAALFEGIGSGAVTAPFS
                     AALDAETIFVIGANPTGNHPVAATFIKNAVKRGAKLVVIDPRGQGLSRHATVDIRFKP
                     GSDVALLNAMLHTIITEGLTDRQYIAGFTEGFPELVERIGAFSPEAMEPVCGVPAETL
                     RTVARMYARSKASIIFWGMGISQHVHGTDNARCLIALALVTGQIARPGTGLHPLRGQN
                     NVQGASDAGLIPMFFTDYRPVELPSAHQYFEASWGVPLDPKRGLTVVEIMNAVHAGQI
                     EGMYIMGENPAMSDPDIHHARQALAKLKHLIVQDIFLTETAWHADVVLPASVFPEKTG
                     TYTNTDRRIQLGRTALPLPGQARRDLDIIIDLANRLGCGWTYPGVGDVYTEMAGTMPS
                     LKNISWERLLREGAVTYPADGPDVPGNEILFNTGYPTQSGRGRIVPAHIRPPDELPDA
                     QYPFVLSTGRVLEHWHTGAMTRRSAVLDELEPEAMAFLAPRELEKLGIERGDMIRVST
                     RRGVIELKVRADSDVPDGMVFIPFCYAEAAANILTNPALDPVGKIPEFKFCAAQVEPV
                     KAIAQAAQ"
BASE COUNT          615 a         1306 c         1227 g          592 t
ORIGIN      
        1 catgctgatc ggcgcacacc tggtcgaggc aagcgacatc tatttctatc tgcgcgacga
       61 atatccggcc tgccgcgaga tcctcgtgcg cgagatcgcg gccctcgacg cggccggcct
      121 gctggccggc gcgcgcgtcc atctgcgccg cggcgccggc gcctacatct gcggcgaaga
      181 gtcggcgatg atcgaaagca tcgagggcaa gcgcggcctg ccgcggaacc gcccgccgct
      241 gccctatcag gtcgggatct tcggccggcc gaccctcatc aataatgtcg agaccctcta
      301 ctgggtccgc gatctggtcg agcgcggccc cgagtggtgg cagggccagg gacgcaacgg
      361 acgcaagggc ctgcatgtct attcggtatc ggggcgggtg gtcgatcccg gcgtcaagat
      421 cgcgccggcc ggcgtcaccg tgcgcgagct tatagacgaa ttctgcggcg gcatgctgga
      481 gggccacgcc ttcaaggcct acgtgccggg cggtccgtcg agcggtatcc tgccggcggc
      541 gctgggcgaa gttccgctcg atttcggcac gctcgaggcg catggcagct tcatcggctc
      601 ggccgccgtt gtcatcctgt ccgaccgtga cgatatccgg gaggccgcga tcaacctgat
      661 gcgtttcttc caggacgaga gctgcggcca gtgcacgccc tgccgggtgg gcaccgagaa
      721 ggcggtcaag ctgatggcgg cgcgcggctg ggacaaggcg ctgctcgacg aattgtcggt
      781 ggccatgcgc gacgcctcga tctgcggact gggccaggcc gcgcccaatt cgatgacctc
      841 agtcatgacg catttcgcgg ccgaagtagg gattgcgccg ggcaaaagtc cggcgagcgg
      901 agcgagccga tgagcggcat caagttcagc atcgacggcg tcgaggtcga ggcccgcgag
      961 ggcgagacga tctggcaggt cgccaatcgc cacgacgtcg ccatccccca tctctgctat
     1021 tcgaccgcgc ccacctaccg gcccgacggc aattgccgcg cctgcatggt cgagatcgag
     1081 ggcgagcgcg tactggccgc ctcctgcctg cgtcagccga ccgcggggat gaaggttggc
     1141 gtcgccaccc ggcgcgccga ggcgtcgcgc cgcatggtgt tcgagctcct ggtcgccgac
     1201 cagccggcgc gcgccacctc gcacgatccg gattcgaagt tctggaactg ggccgacaag
     1261 gtcggcgtga cgacgagccg cttcccggcc gaccagcgcc cggccagcga taccagtcat
     1321 ccggcgatgg cggtcaatct cgatgcctgc atcgagtgca atctctgcgt ccgcgcctgc
     1381 cgcgaagtcc aggtcaacga cgtgatcggc atggccggcc gcggccatca cgagaagatc
     1441 gtcttcgatt tcgacgaccc gatgggcgac agctcctgcg tcgcctgcgg cgaatgtgtg
     1501 caagcctgcc cgaccggcgc gctgatgccg gcgtccctgc tcgaccatgc gcaaacccgc
     1561 acccaatggg cggatcgcga ggtcgacagc ctctgcccgt tctgcggcgt cggctgccag
     1621 ctcacctacc acatcaagga tgacaagatc ctccatgtca gcggcaagga cgggccggcc
     1681 aatcgggcgc ggctctgcgt aaaaggccgc ttcggctacg actacgccaa tcatcccgac
     1741 cgtctcaccg tgccgctggt gcgcaaggac ggcgtgccca aatcggccga ggacgacgtc
     1801 gacccggcca atccgtggac gcatttccgt gaggccacct gggaagaggc gatggaacgc
     1861 gccgccgccg gcctgatcga aatccgcgag cgcaagggcg ggccgggact ggccggcttc
     1921 ggctcggcca agggctcgaa cgaagaggcc tatctgttcc agaagctggt gcgcaccggc
     1981 ttcggcacca acaatgtcga tcattgcacg cggctctgcc acgcctcgtc ggtggcggcg
     2041 ctgttcgagg gcatcggctc aggcgcggtg acggcgccgt tctcggcagc gctcgacgcc
     2101 gagaccatct tcgtcatcgg cgccaatccc accggcaacc atccggtcgc ggccaccttc
     2161 atcaagaacg ccgtcaagcg cggcgccaag ctggtcgtca tcgatccgcg cggccagggc
     2221 ctgtcgcggc acgccacggt cgacatccgc ttcaagccgg gcagcgacgt ggcgctcctg
     2281 aacgccatgc tgcacaccat catcaccgag ggcctgaccg accggcagta catcgcaggt
     2341 ttcaccgaag gctttcccga gctggtcgag cgcatcggcg ccttctcgcc cgaggcgatg
     2401 gagccggtct gcggcgtgcc ggccgagacg ctgcgcacgg tcgcccgcat gtatgcgcgc
     2461 tcgaaggcct cgatcatctt ctggggcatg ggcatctcgc agcacgtcca cggcaccgac
     2521 aacgcgcgct gcctgatcgc gctcgccctg gtcaccggcc agatcgcgcg gcccggcacc
     2581 ggcctgcatc cgctgcgcgg ccagaacaac gtccagggcg cctcggacgc cggcctgatc
     2641 ccgatgttct tcaccgacta ccggccggtc gagctgccct cggcccacca gtatttcgag
     2701 gcgagctggg gcgtgccgct cgatcccaag cgtgggctca ccgtggtcga gatcatgaac
     2761 gcggtccatg ccggccagat cgagggcatg tacatcatgg gcgagaaccc cgcgatgtcc
     2821 gatcccgaca tccatcacgc ccgccaggcg ctggccaagc tgaagcacct gattgtccag
     2881 gacatcttcc tgacggagac cgcgtggcac gccgatgtgg tgctgccggc gtcggtcttc
     2941 ccggaaaaga ccggcaccta caccaacacc gatcgccgca tacagctcgg ccgcaccgcc
     3001 ttgcccttgc ccggacaggc gaggcgcgat ctcgacatca ttatcgatct cgccaatcgg
     3061 ctgggctgtg gctggaccta tccgggcgtc ggcgacgtct ataccgaaat ggcgggcacc
     3121 atgccctctc tcaagaacat cagctgggag cggctgctgc gcgagggcgc ggtgacctat
     3181 cccgctgacg ggcccgacgt gccgggcaat gagatcctgt tcaacaccgg ctacccgacg
     3241 caaagcgggc gcggccgcat cgtgccggcc catatccggc cgcccgacga actgccggac
     3301 gcgcagtatc ctttcgtgct ctcgaccggc cgcgtgctcg agcactggca taccggcgcc
     3361 atgacgcggc gctcggccgt gctcgacgag ctcgagcccg aggcgatggc gttcctggcg
     3421 ccgcgggagc tggagaagct cggcatcgag cgcggcgaca tgatcagggt gtcgacccgg
     3481 cgcggcgtca tcgagctcaa ggtgcgtgcc gattccgacg tgcccgacgg catggtgttc
     3541 attccgttct gctacgccga ggcggcggcc aacatcctga ccaacccggc gctcgatccc
     3601 gtcggcaaga ttcccgagtt caagttctgc gccgcgcagg tcgagccggt caaagccatc
     3661 gcccaagcgg cccagtaacg cgggcgccgc gcatggcaca gctttccgac gattgctttg
     3721 ccttcggcgg cagccttttg
//
LOCUS       DASWGA010000768         4732 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1988111, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000768 DASWGA010000000
VERSION     DASWGA010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4732
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1988111"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..853
                     /locus_tag="VF991_17950"
     CDS             <1..853
                     /locus_tag="VF991_17950"
                     /inference="COORDINATES: protein motif:HMM:NF021624.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HEX9558382.1"
                     /translation="DRRYLAHEYFNRDWQPMHFATVADWLAPAKLCYVCSADFAEHVD
                     ALSLSAAQRSLIEEIREPRLRESVRDFIANPIFRRDYWAKGVEPISAADRAEALRRER
                     VIFVEHAGELPFKLRAALALREAEPGDAVSAAILQILGDRKAWSLGEIERAFKPRDVS
                     LDRIADIVFLIASCGLIQAAQDDAVSARIRSRTDRLNAWSIDRARVGRDMPDLASPVT
                     GGGIAVGRIEQLFLFALRHGKTRPEEWAHEASKFVTTEQAAVDLTGQAQSFAEKRLPT
                     LRALQIV"
     gene            1038..2228
                     /locus_tag="VF991_17955"
     CDS             1038..2228
                     /locus_tag="VF991_17955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9558383.1"
                     /translation="MTSPSVAGSGPNGPRARPEFERIALLLQGGGALGAYQAGVYQAL
                     AESDLHPDWVAGISIGAINAALIAGNPPERRVGQLRAFWETVTAPPLGIPYVAGLQLA
                     NDLQRQMVNQFRAMGTLLWGAPNFFKPRIPPPIFLPAGNPGNLAFYDIAPLKTLLERL
                     VDFDRINAKEIRFSVGATNVKTGNLTYFDSLTHKIGPAHVMASGSLPPGFPATEVDGE
                     FYWDGGILSNTPLQWVLDARPREDTLAFQVDLWSARGELPRDMIEVDTRQKDIRYSSR
                     TRAGTTTFRKMQALRRAAAKLLEQMRPELRQTPEAELLAQAADTKVYNIIHLIYHAKN
                     YEGASKDFEFSRRTMEEHWKTGYSDMEHTLRHPEVLQRPQSPDGVFIFDLKDQGREQE
                     KLEK"
     gene            2225..2980
                     /locus_tag="VF991_17960"
     CDS             2225..2980
                     /locus_tag="VF991_17960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate decarboxylase"
                     /protein_id="HEX9558384.1"
                     /translation="MKLADVRKNAFAMPLNDPAYPRGPYKFYNREFVVITYRTDPARL
                     RSVVPEPLEVVGDTVNYEFIRMPDSTGFGDYTETGQVIPVRFKDKDGTVQEGGYVHAM
                     YLDDNSPIAGGREIWGFPKKLASPKVCHENETLLCTLHYGSVLCVSATMGYKHRELDP
                     APLLKSLAKPGFMIKIIPHVDCTPRICELVRYYLEDVTVKGAWSGPAALQFFDHAMCD
                     VNRLPVLEVLSASHFVTDLTLGLGEVVFDYLAQ"
     gene            3172..3969
                     /locus_tag="VF991_17965"
     CDS             3172..3969
                     /locus_tag="VF991_17965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018070851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HEX9558385.1"
                     /translation="MSRFTGRVAIVTGAASGIGKEIALRLAAEGGIPVIADLNLDAAN
                     ATAQEIKALYKDKGGADAFAVAMNVADEAQVERGIADTMAKYGRIDVLVSNAGIQIVR
                     PLVDFPFADWKKLLSIHLDGAFLTTKACLKHMYAARYGRVVYMGSVHSKEASKLKAPY
                     VTAKHGLIGLAKVLAKEGAEYNVAANVVCPGFVRTPLVDKQIPEQAKELNISEDDVIK
                     HVMLKDTVDGQFTTTDEVADAVLYFAAAKSTALTGQSMVVSHGWFMQ"
     gene            4105..>4732
                     /locus_tag="VF991_17970"
     CDS             4105..>4732
                     /locus_tag="VF991_17970"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P44/Msp2 family outer membrane protein"
                     /protein_id="HEX9558386.1"
                     /translation="MTKKALLAAAAVLALPMAAQAQSSSWFGSAGPTYPGFYIGAEGG
                     ANWLLNNQSYIMDTGWAAGGKVGYDFVGPRVELEGMYHSNTGTAVVAFPTGYANVRGR
                     IDQVSVMANLLYDFFPGATITPYIGAGAGVAFVDANIQGCNLCLAMFAYQGILGVGYN
                     ATPALRIGLEGRYYGTTNPGAYFNNNIMALLSLSYKFGQPEVAPPPPPA"
BASE COUNT          873 a         1601 c         1462 g          796 t
ORIGIN      
        1 ggatcggcgc tacttggcgc acgaatactt caatcgcgat tggcaaccga tgcacttcgc
       61 gaccgtggcg gactggctgg cgccggcgaa gctgtgttac gtctgttccg cggattttgc
      121 cgagcatgtc gatgcgctca gtctttccgc ggcgcagcgg agcctgatcg aggaaattcg
      181 cgagcctcgc ctgcgcgagt cggttcggga cttcatcgcc aacccaatct tccgccgcga
      241 ctactgggcc aaaggcgtcg aaccgatctc ggcggcggac cgggccgagg cgctgcgtcg
      301 cgaaagggtg atcttcgtcg agcatgcagg cgagctgccg ttcaagttgc gggcggcgct
      361 ggcgctgagg gaggccgagc cgggcgatgc ggtatcggcg gcgattctcc agattctggg
      421 cgaccgcaag gcctggtccc tcggcgagat cgagcgggca ttcaagccga gagacgtctc
      481 gctcgatcgc atcgccgata tagtctttct tattgccagc tgcggactga tccaggcggc
      541 gcaggacgat gcggtctcgg cgcgcattcg ctcacgcacc gacaggctca atgcctggtc
      601 gatcgacagg gcgcgcgtcg gccgcgacat gccggacctt gccagccccg tcacgggcgg
      661 cggcattgcc gtcgggcgga tcgagcaact tttcctgttc gcgctgcgcc acggcaagac
      721 ccggccggag gagtgggcgc acgaggcctc gaagttcgtc acgacagaac aagccgccgt
      781 cgacttgacc gggcaggcac agagcttcgc cgagaaaaga ctgcccacgc tacgggccct
      841 gcagatcgtg tagcagcgag ccgccgctga aagcgcgtgc tggccttgcg ctctcagcgc
      901 gacgcgctga cgcgggccgg cgggccgaca tggcacgcac catgctttaa aggggtcgtc
      961 cgaatcgcca ttgctctcgc gccgccgacg cggcagagat cagcgctgcg gcgacgatgc
     1021 cgccaaggag acctctcatg acatcgccgt cggtggcggg ttccggtccc aacggaccgc
     1081 gggcgcgacc ggagttcgaa cggatcgccc tgctcctgca gggcggcggt gcgctcggtg
     1141 cctaccaggc cggcgtctac caggcgctgg ccgaatcaga tcttcatcct gactgggtcg
     1201 ccggcatctc gatcggcgcc atcaacgccg cgctgatcgc cggcaatccg ccggagcgcc
     1261 gggtcggcca gctgcgcgcc ttctgggaga ccgtgaccgc gccaccgctt ggcatcccct
     1321 atgtcgccgg gctgcagctc gccaacgatc tgcagcgcca gatggtcaac cagttccgcg
     1381 ccatggggac cttgctgtgg ggcgcaccga acttcttcaa gccgcgcatc ccgccgccga
     1441 tcttcctgcc ggccggcaac cccggaaacc ttgccttcta cgacatcgcg ccgctcaaga
     1501 cgctgctcga acggctggtc gatttcgacc gcatcaacgc caaagagatc cgcttcagcg
     1561 tcggcgccac caacgtcaag accggcaacc tcacctactt cgacagcctg acccacaaga
     1621 tcggaccggc ccatgtcatg gccagcggct cgctgccgcc gggctttccc gccaccgagg
     1681 tcgacggcga gttctactgg gacggcggca tcctctccaa cacgccattg caatgggtgc
     1741 tcgacgcccg gccgcgcgag gacacgctgg ccttccaggt cgatctgtgg agcgcgcgcg
     1801 gcgagctgcc gcgcgacatg atcgaggtcg acacgcgcca gaaggacatc cgctattcga
     1861 gccgcacccg cgccggcacc accaccttcc gcaagatgca ggcgctgcgc cgcgccgcgg
     1921 ccaagctcct cgagcagatg cgccccgagc tgcgccagac gccggaggcc gaattgctgg
     1981 cgcaggcggc cgacaccaag gtctacaaca tcatccacct gatctatcac gccaagaact
     2041 acgagggcgc ctcgaaggac ttcgaattct cccgccgcac gatggaggag cactggaaga
     2101 ccggttacag cgacatggaa cacaccttgc gtcatcccga ggtgctgcaa cgtccgcaaa
     2161 gccccgacgg ggtttttatc ttcgacctca aggaccaggg tcgcgagcag gagaaattag
     2221 agaaatgaag ctagccgatg tgcgcaagaa cgccttcgcc atgccgctca acgatccggc
     2281 atatcccagg ggtccctata aattctacaa ccgtgaattc gtcgtcatca cctaccgcac
     2341 cgaccccgcg cgcctgcgct cggtcgtgcc cgagccgctc gaggtggtgg gcgacacggt
     2401 gaactacgag ttcattcgca tgcccgattc gaccggcttc ggcgactaca ccgagaccgg
     2461 ccaggtgatc ccggtgcgct tcaaggacaa ggacggcacg gtgcaggaag gcggctacgt
     2521 gcacgcgatg tatctcgacg acaattcgcc gatcgccggc ggccgcgaga tctgggggtt
     2581 cccgaagaaa ctcgccagcc cgaaggtctg ccacgagaac gagactctgc tgtgcaccct
     2641 gcactacggc tcggtgctct gcgtcagcgc caccatgggc tacaagcacc gcgagctcga
     2701 tcccgcgccg ctgctcaaga gcctggccaa gcccggcttc atgatcaaga tcatcccgca
     2761 cgtcgactgc acgccgcgca tctgcgaact ggtgcgctac tacctcgagg acgtgacggt
     2821 gaagggcgcg tggtccggcc cggccgccct gcagttcttc gaccacgcca tgtgcgacgt
     2881 gaaccgcttg ccggtattgg aagtcctctc ggccagccac ttcgtcaccg acctgacatt
     2941 gggccttggt gaagtcgtgt tcgactacct ggcccagtga accttgcggt ggacacatct
     3001 caaattcctc tccctcagcg ccttcacagg cgcgactagg gggagaggct aggtgagggg
     3061 gtaacgacgt gcctatcccc ctcacccgtc ctctccccct agcgggggag aggagcctga
     3121 tttgacgatg tgtccacgcc gtagcaacgc caaccacaaa aggatcgcct catgtcccgc
     3181 ttcacaggaa gagttgccat cgtcaccggc gcggccagtg gcatcggcaa ggaaatcgcg
     3241 ctgagactcg cggccgaggg cggcattccg gtcatcgccg atctcaatct cgacgccgcc
     3301 aacgccacgg cccaggagat caaggccctc tataaagaca aggggggcgc cgatgccttc
     3361 gccgtcgcca tgaacgtcgc cgacgaggcc caggtcgaga ggggcatcgc cgacaccatg
     3421 gccaagtacg ggcggatcga cgtgctggtg agcaatgccg gcatccagat cgtgaggccg
     3481 ctggtcgact tcccgttcgc cgactggaag aagcttttat cgatccatct cgacggcgcc
     3541 ttcctcacca ccaaggcctg cctgaagcac atgtatgccg cccgctacgg ccgcgtggtc
     3601 tacatgggct cggtccattc caaggaggcc tccaagctca aggcgcccta tgtcaccgcc
     3661 aagcacggac tgatcggcct ggccaaggtg ctggccaagg aaggggcgga atacaacgtg
     3721 gcggccaacg tggtgtgccc cggcttcgtg cgcacgccgc tggtcgacaa gcagatcccc
     3781 gagcaggcca aggagctcaa tatcagcgag gacgacgtca tcaagcacgt catgctgaag
     3841 gacacggtcg atggccagtt cacgaccacc gacgaagtgg ctgatgccgt tctctatttc
     3901 gccgccgcca agagcactgc cctgaccggc caatcgatgg tcgtgagcca cggctggttt
     3961 atgcagtagg tctgcggttg gcggttgtgt tgcaaggctg caacacgccc ggcggttaaa
     4021 ggccggaacc cgtgaccgcg ggcaaccccg gtcttggccc ctcgttggtc gagtacttgc
     4081 gctcgaacga ggagaaccct gtccatgacc aagaaggcac ttctggctgc tgcggcagtc
     4141 ctggcccttc cgatggcggc tcaggcccag tcgtcgtcgt ggttcggctc cgccggaccg
     4201 acctatccgg gcttctatat cggtgccgaa ggcggcgcca actggctgct gaacaatcaa
     4261 agctacatca tggatacggg ctgggccgcg ggcggcaagg tcggctacga cttcgtcggt
     4321 ccgcgcgtcg agttggaggg catgtaccat tccaacaccg gcactgccgt cgtagccttc
     4381 cccaccggtt acgccaatgt gcgcggcagg atcgaccagg tctcggtgat ggccaacctg
     4441 ctctatgact tcttcccggg agcgacgatc acgccttaca tcggcgccgg cgcaggcgtt
     4501 gccttcgtcg atgccaacat ccagggctgc aacctctgcc tcgcgatgtt cgcttaccag
     4561 ggcatcctgg gtgtcggcta caacgcgaca ccagcgctgc gcatcggctt ggaaggccgc
     4621 tactacggca ccaccaatcc cggtgcctac ttcaacaaca acatcatggc cctgctgagt
     4681 ctcagctaca agttcggcca gcctgaagtc gcgccaccgc cgccgccagc cg
//
LOCUS       DASWGA010000769         2865 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1231775, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000769 DASWGA010000000
VERSION     DASWGA010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1231775"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..837)
                     /locus_tag="VF991_17975"
     CDS             complement(<1..837)
                     /locus_tag="VF991_17975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558387.1"
                     /translation="MKLSRRHFQHLAGGAAALPIAARQAGAQAWPSRPVRWLVGYAPG
                     GGNDIVARLMGQWLSDRLGQPFVIENRPGAATNMATEAVVHAAPDGYTLLLVGQPNAI
                     NATLYDTLSFNFIRDIAPVAGLMTVPNVMVIHPSFPAQTVLEFIAYAKAEPGKVNMAS
                     AGNGSVAHLAGELFKSLTGISMVHVPYRGQAPALADLLGGQVQVLFATSPASIEYVRA
                     GKLRALAVTTATRAEALPDLPTVGDFVPGYEASAWYGIGAPRKTPAEIIERLNREANA
                     GLA"
     gene            1056..1280
                     /locus_tag="VF991_17980"
     CDS             1056..1280
                     /locus_tag="VF991_17980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin"
                     /protein_id="HEX9558388.1"
                     /translation="MSRISSLVVCAALALATAACGDTPGQRAVTGGAIGAGGGALVGA
                     AAGGNPLIGAVVGGLGGAAIGAATTPNRNW"
     gene            1597..1959
                     /locus_tag="VF991_17985"
     CDS             1597..1959
                     /locus_tag="VF991_17985"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HEX9558389.1"
                     /translation="MFATEKFGSMGAFYVLVVWMFGWMALASLGFSGFRNDPYPFDFL
                     LFLSNLVQLFALPILAVGQQVLSRASDKQAELTFRDAEAILKLQDEVRHLIEINNEMT
                     REIHMAIHNTGEKTPSPA"
     gene            complement(1969..>2865)
                     /locus_tag="VF991_17990"
     CDS             complement(1969..>2865)
                     /locus_tag="VF991_17990"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX9558390.1"
                     /translation="PGPATARAGREVIVSGGVYGSPQLLMLSGLGPGAHLQQHGIKVI
                     KDMPGVGSHLHDHFNTYVAYRCTQPVTMNDLAISLPRRLMAAAQYAFGRTGPLAAMGL
                     FVGALVRSDKRLERPDLQINMFAWATKERTRAGVVPQPFSAFGLSPVHLRPDGRGTVR
                     LKSPDPLAAPEIRFNFLKSAYDFEALIHGMRLCREIARQPALKPFVGEEILPGAEVTG
                     EAELRAFIRANGVSNLHPVGTCRMGREVDAVVDPQLRVHGIAALRIADASIMPSIVAG
                     NTNAPTIMIGEKCADMVRAAAR"
BASE COUNT          456 a          924 c          988 g          497 t
ORIGIN      
        1 ggcgaggccg gcattggctt ccctgttcag ccgctcgatg atctcggccg gcgtctttcg
       61 gggcgcgccg atgccgtacc acgcgctcgc ctcatagccc ggcacgaagt cgcccacggt
      121 cggcaggtcg ggcagcgcct cggcacgcgt cgccgtggtg acggccagcg cccgcagctt
      181 gccggccctg acatactcga tcgaggcggg agaggtggcg aacaggacct ggacctggcc
      241 gcccagcagg tcggcgagcg ccggcgcctg gccgcgatag ggcacgtgga ccatgctgat
      301 gccggtcagc gacttgaaca gttcgccggc gaggtgggcg acgctgccgt tgcccgccga
      361 tgccatgttg accttgccgg gctcggcctt ggcataggca atgaactcga ggacggtctg
      421 cgcgggaaac gatggatgga tcaccatcac gttcggcacg gtcatgaggc cggcgaccgg
      481 ggcgatgtca cggatgaagt tgaagctgag cgtgtcgtag agggtcgcgt tgatcgcgtt
      541 gggctggccg accagcagca gggtatagcc gtcgggggct gcatggacga ccgcctcggt
      601 cgccatgttg gtggcggcgc cggggcggtt ctcgatcacg aagggctgtc ccagccggtc
      661 cgaaagccac tggcccatca ggcgcgcgac gatgtcgttg ccgccgccgg gagcgtagcc
      721 gacgagccag cgcaccgggc gggagggcca ggcttgcgcg cctgcctgtc tcgccgcgat
      781 cggcagcgcg gcagcccccc cggcaagatg ctggaagtga cgacgggaaa gcttcatctc
      841 gttcctgccc tcggcgaagg cgtcgactgt ggcattcgtg ggcactgcag tcaccatgcg
      901 acgccaaccg ttggggccac ccgctccggt cgcgctatcg cttgccgtcc gggcgaaatc
      961 cagcccggat ttcgccacat caagccgggc ggtcgccgca gcgcaaccgc aggcgctcat
     1021 cttcgtttta atgggatcga ctctgggagc tgctcatgtc acgcatttct tcactcgttg
     1081 tgtgcgctgc cctggcgctg gcgaccgccg cttgtggcga cacgccagga caacgcgcgg
     1141 tgaccggcgg tgctatcggc gccggcggcg gcgcgctggt tggcgctgcg gccggcggaa
     1201 accccttgat cggcgcggtc gtcggcggcc tgggtggcgc cgcgatcggc gcagcgacga
     1261 cgccgaaccg taactggtag gtcttctgcc agactgccgc cgggtcgggt tcgctttatc
     1321 gaacccgata cggcggcctt tttgtgactc gtcgcggcgg ggaggggatg gctgcgcgcc
     1381 gaaccgtggc gcggctgccg tggcatcgct tcttgagggg caagcattcg acatttccgt
     1441 cgacatcggc aacgttgctt caggccgatg acgcttcagg ggagccgcag agccatgaca
     1501 aaaatacacg tcccgcatcc ctggatacgg gagagagcga aactgggccc ggctcggacc
     1561 aagcaggaag gccttgggtt caatggtcgt ttggcggtgt tcgccacgga gaaattcggc
     1621 tcgatggggg cgttctatgt cctcgtcgtg tggatgttcg gctggatggc cctggccagc
     1681 ctggggttca gcggatttcg caacgatccg taccccttcg actttttgct tttcctgagc
     1741 aacctggttc aattgttcgc cctgcccatc ctggcggtcg gccagcaggt tctgagccgc
     1801 gcgtccgaca aacaggccga actcaccttc agggacgccg aggcgatcct gaaactccag
     1861 gatgaagtcc gccatttgat cgaaataaac aatgagatga cccgggaaat tcacatggcc
     1921 atccacaaca ccggcgaaaa gacaccaagc cctgcttgat cgtcggcatc aacgggccgc
     1981 cgcgcgcacc atgtcggcgc acttctcgcc gatcatgatc gtgggcgcgt tggtgttgcc
     2041 ggccacgatc gagggcatga tcgaggcatc ggcgatgcgc agggctgcga tgccgtggac
     2101 ccggagctgg gggtcgacca ccgcatcgac ctcgcggccc atgcggcagg tgccgaccgg
     2161 gtgcaggttc gacacgccgt tggcgcggat gaaggccctg agctcggcct cgccggtgac
     2221 ctcggcaccc ggcaggattt cctcgccgac gaaaggtttt agcgccggct gccgggcgat
     2281 ctcgcggcag agccgcatgc cgtggatcag cgcctcgaaa tcgtaggcgc ttttcaggaa
     2341 attgaatcgg atttccggcg ctgccagcgg gtcgggcgat ttcagccgca ccgtgccgcg
     2401 gccatcgggc ctgagatgca ccgggctgag gccaaaggcc gagaagggct gcggcaccac
     2461 gccggcccgc gtcctttcct tggtcgccca ggcgaacatg ttgatctgca ggtccggccg
     2521 ctccagccgt ttgtcgctgc gcaccagcgc gccgacgaac agccccatgg cggccagcgg
     2581 cccggtacgg ccaaacgcat attgcgccgc cgccatcagc cggcgcggca ggcttatcgc
     2641 caggtcgttc atggtgaccg gctgggtgca gcgataggcg acataggtgt tgaagtgatc
     2701 gtgcaggtgg ctgccgacgc cgggcatgtc cttgatcacc ttgatgccgt gctgctgcag
     2761 gtgcgcgccc gggcccagcc ctgacagcat caagagctgc ggcgagccat agaccccgcc
     2821 cgacacgatg acctcgcgtc cggcccgcgc cgtcgctggt cctgg
//
LOCUS       DASWGA010000770         3410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_460910, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000770 DASWGA010000000
VERSION     DASWGA010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3410
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460910"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VF991_17995"
     CDS             <1..563
                     /locus_tag="VF991_17995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404523.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9558391.1"
                     /translation="SGLLAGLALALLRSLAIRPLNWLIIFVIDLFRSLPPLVIIVLMY
                     FGLPSVNVSPSGFVSTWLSLALVLMAFSEEIFWAGITSVHKGQWEAARSTGLSFGQTL
                     MNVVLPQALRLTIPPLTNRTIAITKGTALGTVVAVTEILGQASSAMSNSYNPSPLMMG
                     AAAYIVLFLPVVVAARWIETKFAWKR"
     gene            560..1225
                     /locus_tag="VF991_18000"
     CDS             560..1225
                     /locus_tag="VF991_18000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX9558392.1"
                     /translation="MIDTFFNLDIIAAAYPIVLAGLLNTILLSLIVVPLGLLGGLILA
                     LLASVHHPLVRWPLIAWVDFFRAFPPLVLLVLLFAGLPFAGLELGGFACVAIAFFLNT
                     GAYYGEIFRAGIDSVPGGQVEAARSTGLGRLQAMTYIVLPQAVRNVLPDLLSNTLEVV
                     KLTSLGSVVAVPELLYQARQAQSLTYNPTPIVVAAMIYFLLLWPLVRLLSRLENRALA
                     ARR"
     gene            1248..1535
                     /locus_tag="VF991_18005"
     CDS             1248..1535
                     /locus_tag="VF991_18005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558393.1"
                     /translation="MRLFTLFLVGLGCLGPAIAAAQEQTPRNAVSYRGLSADDMKAYC
                     FWNGQLFSVGATFCIRQASVATCTEEPGKRPIWVTKDNDKFCDKNPSTTPQ"
     gene            1661..2626
                     /locus_tag="VF991_18010"
     CDS             1661..2626
                     /locus_tag="VF991_18010"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558394.1"
                     /translation="MNRIVRALMALALALVVHPLAAQTNWPDKPVRLVVGFTAGSATD
                     VTARMFAQKFSEAWGQPVVVENIAGNSGAIGTDKVAKAQPDGYTLMWSGNAAITILPN
                     LQTLPFDPLKDLAPISTALSMPSIFLVNNDLPVKSIGELIAYAKANPGKLSYGTPGVG
                     TPQHVAGELFCHLAGIKMEHIPYRGANLADVMGGIVPVGIQNAGASLPLVRDGRVRGI
                     GITSLKRSPNAPDLQTMVEAGFPGFEATSWFALMAPAGTPQPILDKVRAQSLKVLADP
                     EMQKKFAALGLDVVGSTPEQTRAAIANDIPKWGKVIKDANIKPGN"
     gene            2628..>3410
                     /locus_tag="VF991_18015"
     CDS             2628..>3410
                     /locus_tag="VF991_18015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9558395.1"
                     /translation="MAAFARLGAALDGNPALQRRAKLAALSFTVLSGDQATTVQAGER
                     VAVRPGAMSGAAFSLAAAPSSWSEFAKPVPAAGFQSLVAMQRVGHLRIDGDMLAYGRN
                     LLFLEQLFAALRPPAVAAPAAAVGAPVVEPVVGRYLRLDLNGKPHRLYFEEAGEGIPL
                     LCLHTAGADGRQYRAILNDAEITSRYRVIAFDLPWHGKSSPPPGFESEAYQLTTDLYV
                     DTVMAVSRALGLQRPVVMGCSIGGRAVLHLALRHGAHFRGAIG"
BASE COUNT          503 a         1200 c         1083 g          624 t
ORIGIN      
        1 cgagcgggct cttggccggc ctggctctcg ccttgctgcg cagcctcgcc atcagaccgc
       61 tcaactggct gatcatcttc gtgatcgacc tgtttcgctc gctgccgccg ctggtcatca
      121 tcgtgctgat gtatttcggc ctgcccagcg tcaacgtctc gccctccggc ttcgtctcga
      181 cttggctgtc gctggccctc gtgctgatgg ccttctccga ggagatcttc tgggccggca
      241 tcacctcggt gcacaaaggc cagtgggagg ccgcgcgctc gaccggcctg tcgttcggcc
      301 agaccctcat gaacgtcgtg ctgccgcagg ctctccgtct caccatcccg ccgctcacca
      361 accgcaccat cgccatcacc aagggcaccg cgctcggcac cgtcgtcgcc gtcaccgaga
      421 ttttgggcca ggcgagctcg gcgatgtcga attcctacaa tccctcgccg ctgatgatgg
      481 gcgcggccgc ctatatcgtg ctgttcctgc cggtcgtcgt ggcggcgcgc tggatcgaga
      541 ccaagttcgc gtggaagcga tgatcgacac cttcttcaac ctcgacatca tcgccgcggc
      601 gtacccgatc gttctcgccg gccttttgaa caccatcctg ctgtcgctga tcgtggtgcc
      661 gctcggcctg ctgggcgggc tgatcctggc gctgctcgcg tcagtgcatc atccgctggt
      721 gcgctggccg ctgatcgcct gggtcgattt cttccgcgcc ttcccgccgc tggtgctgct
      781 ggtcctgctg ttcgccggcc tgccgttcgc cgggctggag ctgggcggct tcgcttgcgt
      841 ggccatcgcc ttcttcctca acaccggcgc ctactacggc gagatcttcc gcgccggaat
      901 cgattcggtt cccggcggcc aggtcgaggc cgcgcgctcg accgggctcg gccgcctgca
      961 ggccatgacc tacatcgtcc tgccccaggc ggtgcgcaac gtgctgcccg atcttctgtc
     1021 caatacgctc gaggtggtga agctcacctc gctgggcagc gtggtcgccg tgcccgagct
     1081 gctttatcag gcccgccagg cgcagagtct cacctacaat cccactccca tcgtcgtggc
     1141 ggccatgatc tatttcctgc tgttgtggcc gctggttcgc ttgttgagcc gattggagaa
     1201 ccgggcgctg gcggcacggc ggtaaagcgc aaaaaggggg gatcaccatg cgcctgttca
     1261 cgctctttct cgtcggcctg ggctgtcttg gtcctgcgat agcggcagcc caagagcaga
     1321 ctccgcgaaa tgccgtcagc tacagaggcc tcagcgccga cgacatgaag gcctactgct
     1381 tctggaacgg tcagctcttc tcggtcggcg cgaccttttg catccgccag gcctcggtcg
     1441 cgacctgcac cgaggagccg ggcaagcgcc cgatctgggt gaccaaggac aacgacaagt
     1501 tctgcgacaa gaacccgtcg acgacgccgc aatagcgccg ccggattgac cgcctcgcca
     1561 ggcgatcctg cccgttcgga gttgatcggc ggcgcctgac gaagaacggt tgcgccgcct
     1621 cgcctaaatc ccatagcctt ccgccaacgg gaggaaacaa atgaatcgta tcgtccgggc
     1681 gctgatggcg cttgcgctgg cgctcgtcgt ccatccgctg gcggcccaga ccaactggcc
     1741 ggacaagccg gtgcggctgg tcgtcggctt caccgcgggc agcgccaccg atgtcacggc
     1801 ccgcatgttc gcgcagaaat tctccgaggc ctggggccag ccggtggtgg tggagaatat
     1861 cgccggcaac tcgggcgcca tcggcaccga caaggtcgcc aaggcccagc ccgacggcta
     1921 caccctgatg tggtcgggca acgccgccat caccatcctg cccaacctgc agaccttgcc
     1981 gttcgatccg ctgaaagacc tggcgccgat ttcgacggcg ctgtccatgc cctcgatctt
     2041 cctggtcaac aacgacctgc cggtgaagtc gattggcgag ctgatcgcct acgccaaggc
     2101 caatcccggc aagctgtcct acggcacgcc gggtgtcggc acgccgcagc acgtcgcggg
     2161 cgagctgttc tgccatcttg ccggtatcaa gatggagcac atcccctatc ggggcgccaa
     2221 tctcgccgat gtgatgggcg gcatagtccc ggtcggcatc cagaacgccg gcgccagcct
     2281 gccgctggtc agggacggcc gggtgcgcgg catcggcatc acctcgctga agcgctcgcc
     2341 caatgcgccg gacctgcaga cgatggtcga agcgggcttt cccggcttcg aagccacctc
     2401 ctggttcgcc ttgatggcgc cggccggcac gccacagccg atcctcgaca aggtgcgtgc
     2461 gcaatcgctg aaggtgctgg ccgatcccga gatgcagaag aagttcgcgg ccctcggcct
     2521 cgacgtcgtc ggcagcacgc ccgagcaaac gcgggcggcg atcgccaacg acatcccgaa
     2581 atggggcaag gtcatcaagg atgccaacat caagccgggc aattgagatg gctgcgtttg
     2641 cgcgtctcgg cgcggccctc gacggcaatc ccgccttgca acggcgggcg aagctcgcgg
     2701 cgctctcctt caccgtgctg agcggcgatc aggcgacgac ggtgcaggcg ggcgagcgcg
     2761 tcgccgtgcg tcccggggcg atgtccggcg cggccttcag cctcgccgcg gcaccgagca
     2821 gttggtcgga gttcgccaaa ccggtgccgg cggccggctt ccagagcctg gtcgccatgc
     2881 agcgggtcgg ccacttgcgg atcgacggcg acatgctggc ctacgggcgc aatctcctgt
     2941 tcctcgagca gctcttcgcc gcgctgcgtc cgcccgcagt ggcggcgcct gccgctgcag
     3001 tcggcgcgcc cgtggtcgag ccggtggtcg gccgctacct gcgcctggat ttgaacggca
     3061 agcctcatcg cctctacttc gaggaggcgg gcgagggcat tccgctcctc tgcctgcaca
     3121 ccgccggcgc cgacggccgg cagtaccggg cgatcctgaa cgatgcggag atcaccagcc
     3181 gctatcgcgt catcgccttc gacctgccgt ggcacggcaa atcctcgccg ccgcccggct
     3241 tcgagagcga ggcgtatcag ctcacgacag acctctatgt cgataccgtg atggccgtgt
     3301 cgcgggcgct cgggctgcag cggccggtcg tgatgggctg ctcgatcggc ggccgcgccg
     3361 tgctgcacct ggcgctgcgc catggcgctc acttccgtgg tgccatcggc
//
LOCUS       DASWGA010000771         1858 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2370676, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000771 DASWGA010000000
VERSION     DASWGA010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2370676"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1573
                     /locus_tag="VF991_18020"
     CDS             <1..1573
                     /locus_tag="VF991_18020"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEX9558396.1"
                     /translation="IAYGLDFALRVARGWLSARTGARLDTLMSAEVLHHLVQLPYRHF
                     ERTPSGVIAERLRQLDVLRSFFTGQMPVLAIDLVFVVLFLAATFAISATVGIVATLAM
                     PVLVGVSLATHRAQRRLADESFQSLAAKSSTLTETVANAATIKALGLEAEVERRWQAR
                     VEQSAWTSFRANNLANIAASASGSLQLVTSLAIVVIGVHEVVDHRMTVGGLIAANMLA
                     ARALQPMRQLAAAWHQLQAVGAAFKRIDDLMSEAAESEPGELAPMPGLAGDIAFERVS
                     YRADELAPAILRDVDLAVAAGEILGIVGPSGSGKTTIANLVQGLFKPSAGRVLVDGTD
                     IAHISPAQLRAQIGCVPQEVQLFTGSVRENIAMGVADKDPGRVVAVAKFVGAHDFIQR
                     LPQGYNTVLGERGQGLSTGQRQLLCIARALIRNPRILILDEATSALDPATEEQLLRQL
                     KANTRGRTVIMITHRLAPLAIADRVALVMDGRIERIGPPTDVMAYARIRMAEASRGQS
                     AAGAAAHAVAQAMLA"
     gene            complement(1586..>1858)
                     /locus_tag="VF991_18025"
     CDS             complement(1586..>1858)
                     /locus_tag="VF991_18025"
                     /inference="COORDINATES: protein motif:HMM:NF018070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcB family DNA repair protein"
                     /protein_id="HEX9558397.1"
                     /translation="IEDWRVDIKWPDYLDWCDQLYVAVPVDFPQALIPVEIGLIVADS
                     YGGEILRPSPRRPVAAARRKSLLIDCARLASERLARLADPDFGDIA"
BASE COUNT          282 a          667 c          628 g          281 t
ORIGIN      
        1 gatcgcctat ggcctcgact tcgcgctgcg cgtggcgcgc ggctggctgt cggcgcgcac
       61 cggcgcgcgg ctggacacgc tgatgagcgc cgaggtcctg catcatctgg tgcagcttcc
      121 ctaccgacat ttcgagcgca cgccgtcggg cgtcatcgcc gagcggctgc gccagctcga
      181 cgtcctgcgc agctttttca ccggccagat gccggtgctg gccatcgacc ttgtcttcgt
      241 ggtgctgttc ctcgccgcca ccttcgccat cagcgccacc gtgggcatcg tcgccacgct
      301 ggcgatgccg gtgctggtcg gcgtgtcgct ggcgactcat cgcgcgcagc gccggctggc
      361 cgacgaaagc ttccagtcgc tcgccgccaa gagctcgacc ctcaccgaga cggtcgccaa
      421 cgccgccacc atcaaggcgc tgggactgga ggccgaggtc gagaggcgct ggcaggccag
      481 ggtcgagcag tcggcgtgga ccagctttcg cgccaacaat ctcgccaaca tcgcggccag
      541 cgcatcgggc tcgctccagc tcgtgacttc gctggcgatc gtcgtgatcg gcgtgcacga
      601 agtggtcgat caccgcatga cggtgggcgg cctgatcgcc gccaacatgc tggccgcgcg
      661 cgctctgcag ccgatgcgcc agctcgcggc ggcgtggcac cagctccagg ccgtcggcgc
      721 cgccttcaag cgcatcgacg acttgatgag cgaagccgcc gagagcgagc ccggcgagct
      781 ggcgccgatg cccggcttgg ccggcgacat tgccttcgaa cgcgtctcct atcgcgccga
      841 cgaactcgcg ccggcgatcc tgcgcgacgt cgatcttgcc gtggccgccg gcgagatcct
      901 gggcatcgtc ggaccgtcgg gctcgggcaa gacgacgatc gccaacctcg tccagggcct
      961 gttcaagcct tcggccggcc gcgtgctggt cgacggcacc gacatcgccc acatctcgcc
     1021 cgcccaactg cgcgcccaga tcggctgcgt gccgcaggag gtgcagctgt tcaccggatc
     1081 ggtccgcgag aacatcgcga tgggcgtggc cgacaaggat cccggccgcg tcgtcgccgt
     1141 cgccaagttc gtgggggcgc acgatttcat ccagcgcctg ccgcagggct acaacaccgt
     1201 gctgggcgag cgcggccagg gcctgtcgac tggccaacgg cagctcctct gcatcgcccg
     1261 cgcgctgatc cgcaacccgc gcatcctgat cctcgacgag gcgaccagcg cgctcgaccc
     1321 cgccaccgag gaacagctgc tgcgccagct caaggccaat acgcgcggtc gcacggtgat
     1381 catgatcacc catcggctgg cgccgctcgc catcgccgac cgggtggcgc tggtgatgga
     1441 cggcaggatc gagcggatcg gcccgccaac cgacgtcatg gcctatgcgc gcatccgcat
     1501 ggccgaggcc agtcgcggcc agagcgctgc cggcgcggca gcgcatgccg ttgcccaggc
     1561 gatgctggcg taggtcgact cagggctagg cgatatcgcc gaagtcggga tctgccagac
     1621 gggccagccg ttccgaggcc agtcgcgcgc agtcgatcaa cagcgacttg cggcgcgccg
     1681 ccgcgaccgg ccggcgcggc gaggggcgca ggatctcccc gccgtaggag tcggccacga
     1741 tcaggccgat ctccaccgga atgagtgcct gggggaagtc gacaggcacg gcgacgtaga
     1801 gctgatcgca ccagtcgaga tagtcaggcc atttgatgtc gacccgccaa tcctcgat
//
LOCUS       DASWGA010000772         6344 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1480795, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000772 DASWGA010000000
VERSION     DASWGA010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6344
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1480795"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..1016)
                     /gene="gap"
                     /locus_tag="VF991_18030"
     CDS             complement(6..1016)
                     /gene="gap"
                     /locus_tag="VF991_18030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEX9558398.1"
                     /translation="MAVRVAINGFGRIGRNVLRAIVESGRKDVEVVAINDLGPVETNA
                     HLLRFDSVHGRFPHEVKIDGDTIDVGRGKMKVTCERDPSKLPHKAMGIDIALECTGIF
                     TSKKTASAHLTAGAKRVLVSAPADGADLTVVFGINDDKLDKEHVVVSNGSCTTNCLAP
                     MAQIMHQSFGIEHGFMTTIHSYTGDQPTLDTMHKDLYRARAAALNIIPTTTGAAKAIG
                     LVLPELAGKLDGAAIRVPTPNVSFIDLGFVAKRATTIDEVNNAVMAAAKSNRLSKIVT
                     WTKEPMVSSDLNHDPHSATFGIDQTKVLGGTFVRIVAWYDNEWGFSNRMADTAAAMGK
                     LG"
     gene            complement(1018..3015)
                     /gene="tkt"
                     /locus_tag="VF991_18035"
     CDS             complement(1018..3015)
                     /gene="tkt"
                     /locus_tag="VF991_18035"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX9558399.1"
                     /translation="MNEQPAARRDMANAIRALAMDAVQQADSGHPGLPMGMADVATVL
                     FTKFLKFDASEPHWPDRDRFILSAGHGSMLLYALLYLTGYADMTLDEIKRFRQVGSRT
                     AGHPEYGHASGIETTTGPLGQGLGNSVGFAFTERLLAERFGRDIVDHYTYVIAGDGCL
                     MEGVGQEAITLAGHLGLGRLIVLFDDNGISIDGPTSLSTSDDHKKRFAAAGWHVQAVD
                     GHDPDAVTRAIRKARNVTDKPSLIACKTVIGYGAPTKAGTAATHGSPLGKDEVAGARQ
                     KLGWTYGPFEIPEPIFTAWRKIGARGKSARRKWTKRHAAMAEADRAEFDRRQKGDIPA
                     AVGEAIVAFKAKVAAEKPSWATRKASQEALEVINPVLPDTVGGSADLTGSNNTKTASL
                     KPATRSDPAGRYVYYGIREHAMAAAMNGMALHGGVIPYGGTFLVFTDYCRPSIRLATF
                     MKLRVIYVMTHDSIGLGEDGPTHQPIEHLPALRAIPGLQVMRPADAIETAECWQIALE
                     SRHAPSIIALTRQNVPTVRDAGEGNLCRRGAYILAGDASADVRLIASGSEVHLAVAAR
                     ELLAKDGISASVVSMPSWELFAAQDDTYRQQILGADGTVRVACEAASGFGWERWLGTR
                     GAFVGMKGFGGSGKAADLFKHFGITAEAIAEAARGLRNNGG"
     gene            3204..3437
                     /locus_tag="VF991_18040"
     CDS             3204..3437
                     /locus_tag="VF991_18040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558400.1"
                     /translation="MSKAATAKDRVDSALSRLESMVEARLRTEADRAEDLAKRLSKLE
                     RQHDELRKVAMEVEGRLERAMEYVRSLLAADQK"
     gene            3567..3899
                     /locus_tag="VF991_18045"
     CDS             3567..3899
                     /locus_tag="VF991_18045"
                     /inference="COORDINATES: protein motif:HMM:NF017016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEX9558401.1"
                     /translation="MPQVSIQIANRIYELACGDGEEERVQELAAYVDEKVGELRKQLP
                     GAPEIKLMVFASLILADESREARGMAKAAESARASATDSAETLATALEDLITSRVDKM
                     GKKVSGAA"
     gene            3959..4115
                     /gene="ssrS"
                     /locus_tag="VF991_18050"
     ncRNA           3959..4115
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VF991_18050"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            4135..4710
                     /locus_tag="VF991_18055"
     CDS             4135..4710
                     /locus_tag="VF991_18055"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEX9558402.1"
                     /translation="MTLFDDKRTLRSAMLAWRAALAEDERRAAAEGLLASLRREMPFE
                     TPAVVSGFWPIKDEIDIRPLLIELFNVGCQLALPVVQGRGKPLLFRAWRPGDPLEAGV
                     FGTLQPSARRETLEPDALIVPLLACDEEGWRLGYGGGFYDRTLGGLRARRNVTAVGVG
                     FSAQLVPEVPHGPDDQRLDWLLTDKRACAFV"
     gene            4714..5520
                     /locus_tag="VF991_18060"
     CDS             4714..5520
                     /locus_tag="VF991_18060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HEX9558403.1"
                     /translation="MKVLFCGDIVGRAGRDAVIKEVPRLRRELGLDFVAVNGENAAAG
                     FGITAKICTELHEAGVDCITTGNHVWDQREILSYIAQDKRLLRPINFPPGTPGWGANL
                     FQTARGQKILVLNVMCRLFMDALDDPFRAVDAELAKYALGGSAHFILVDVHGEATSEK
                     QSMGHYCDGRVSAVLGTHSHIPTADSWILPGGTAYQTDVGMCGDYDSVIGMKKDIAVQ
                     RFLRKMPGERLAPAEGEGTLCAAVVETDDRTGLARSIRPLRLGGRLPPTG"
     gene            5822..>6344
                     /locus_tag="VF991_18065"
     CDS             5822..>6344
                     /locus_tag="VF991_18065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX9558404.1"
                     /translation="MAGHSQFKNIMHRKGRQDAQRAKIFTKLIREITTAARLGAADPN
                     ANPRLRAAMIAARENNMTRDTIDRAIKRGSGSDAEANYEEVRYEGYGPGGVALIVEAL
                     TNNRNRTAGEVRSSFSKYGGNLGETNSVSFMFDRLGEFRFPLKAGTADEVLEKAIDAG
                     ADDVVSGDGEEATH"
BASE COUNT         1074 a         1978 c         2179 g         1113 t
ORIGIN      
        1 cttggctagc cgagcttgcc catggcggcg gcggtgtcgg ccatgcggtt ggagaaaccc
       61 cattcgttgt cgtaccaggc gacgatgcgg acgaaggtgc cgcccaggac cttggtctgg
      121 tcgatgccga aggtggccga gtgtggatcg tggttgaggt cggacgacac catcggctcc
      181 ttggtccatg tcacgatctt cgacagccgg ttcgatttcg ccgcggccat gaccgcattg
      241 ttgacctcgt cgatcgtggt ggcgcgcttg gccacgaaac ccaggtcgat gaaggaaacg
      301 ttcggcgtcg gcacccggat cgcggcgcca tcgagcttgc ccgcaagttc cggcaggaca
      361 aggccgatgg ccttggcggc gccggtcgtc gtcgggatga tgttcaacgc ggcggcgcgg
      421 gcgcgataga gatccttgtg catggtgtcg agcgtcggct ggtcgccggt gtaggaatgg
      481 atggtggtca tgaagccatg ctcgatgccg aaagactggt gcatgatctg cgccattgga
      541 gccaggcagt tggtcgtgca cgagccgttc gagacgacga cgtgctcctt gtcgagcttg
      601 tcgtcgttga tgccgaagac aacagtcagg tcggcgccgt cggccggcgc agagacaagg
      661 acgcgcttgg cgccagcggt gaggtgcgcg gaggcggttt tcttcgaggt gaagatgccg
      721 gtgcattcga gggcaatgtc gatgcccatc gccttgtgcg gcagcttcga cggatcgcgc
      781 tcgcaggtga ccttcatctt gccgcggccg acgtcgatcg tgtcgccgtc gatcttcacc
      841 tcgtggggga agcggccgtg cacggagtcg aagcgcaaca ggtgggcatt ggtctcgacc
      901 gggccgagat cgttgatcgc cacgacctcg acgtccttgc gccccgattc gacgatggcg
      961 cgcaggacat tgcggccgat gcgcccaaag ccgttgattg ccacccgaac tgccatgtca
     1021 tcctccgtta tttctgagcc cgcgcgccgc ctcggcgatc gcctcggccg tgatgccgaa
     1081 atgcttgaaa agatcggcgg ccttgcccga gccgccgaag cccttcatgc cgacgaacgc
     1141 gccgcgcgtg ccgagccagc gctcccagcc gaagcccgag gccgcctcgc aggcgacgcg
     1201 gaccgtgccg tcggccccca ggatctgttg ccgatatgta tcgtcttgag cggcaaacaa
     1261 ctcccaggag ggcatggaca caacgctggc cgaaatgccg tccttggcga gaagttcgcg
     1321 ggcggcgaca gccaaatgaa cttcggagcc cgacgcgatc agccgaacgt cggccgatgc
     1381 atcgcccgcc aggatgtagg cgccgcgcct gcacaggttg ccttcgccgg cgtcacgcac
     1441 cgtcggcacg ttctggcgcg tgagcgcgat gatgctcggc gcgtgccttg actcgagggc
     1501 gatctgccag cactcggccg tttcgatggc gtcggccggc cgcatcacct gcaggccggg
     1561 aatggcgcgc aacgccggca ggtgctcgat cggctggtgc gtcgggccgt cttcgccgag
     1621 cccgatcgaa tcgtgggtca tcacatagat gacgcgcagc ttcatgaagg tcgccaggcg
     1681 gatcgagggc cggcaatagt cggtgaagac cagaaaagtg ccgccgtagg ggatcacgcc
     1741 gccatgcagc gccatgccgt tcatggccgc cgccatcgcg tgctcgcgga tgccgtaata
     1801 gacgtagcgg ccggccgggt cgctgcgggt cgcgggcttc agcgatgcgg tcttggtgtt
     1861 gttggagccg gtgagatcgg ccgagccgcc caccgtgtcg ggcagcacgg gattgatgac
     1921 ctcgagcgcc tcctggctcg ccttgcgcgt ggcccagctg ggcttttctg ccgcgacctt
     1981 ggccttgaag gcgacgatcg cctcgccgac ggcggccggt atgtcgccct tctggcgacg
     2041 atcgaattca gcgcggtcgg cttcggccat ggcggcatgg cgcttggtcc atttgcgtcg
     2101 cgccgacttg ccgcgtgcgc cgatcttgcg ccaggcggtg aagatcggct cggggatttc
     2161 gaacgggccg taggtccagc cgagcttctg gcgggcgccg gcgacttcgt ccttgccgag
     2221 cggcgagccg tgggtggcgg ccgtgcccgc cttggtcggc gcgccgtagc cgatcaccgt
     2281 cttgcaggcg atcaacgagg gcttgtcggt gacattgcgc gccttgcgga tggcgcgggt
     2341 gacggcgtcg ggatcgtggc cgtcgacggc ctgcacgtgc cagcccgcgg cggcgaagcg
     2401 cttcttgtgg tcgtccgacg tgctaagcga agtcggcccg tcgatcgaga tgccgttgtc
     2461 gtcgaacagc acgatcagcc ggccaagccc gagatggccg gccagcgtga tcgcctcctg
     2521 gccgacgcct tccatcaggc agccgtcgcc ggcgatgacg taggtatagt gatcgacgat
     2581 atcgcggccg aaacgttcgg cgagcaggcg ctcggtgaag gcgaacccca ccgagttgcc
     2641 cagaccctgg ccgagcggac cggtggtggt ttcgatgccg ctggcatggc cgtattccgg
     2701 atgtcccgcg gtgcggctgc cgacctggcg aaatcttttg atctcgtcga gcgtcatgtc
     2761 ggcgtagccg gtgagataga gcagcgcata gagcagcatc gagccgtggc cggccgacag
     2821 gatgaagcgg tcgcgatcgg gccaatgcgg ctccgatgcg tcgaacttca ggaacttcgt
     2881 gaacaggacg gtggcgacat cggccatgcc catcggcagg ccaggatgac cggaatccgc
     2941 ctgctgcacg gcgtccatgg ccagggccct gatggcgttc gccatgtcgc ggcgggcggc
     3001 gggttgttca ttcatttatg tgagcgccgt gtgatttttc ggggcggccg gcaacatgcc
     3061 gaccgcctat tggcgcgtca atgcgcaaaa gcgctggcac gaccaacatc tagcgtcgga
     3121 ggacgctcca cagggccaag atgttgaccg ctcaccggtg caccacttat cctcccgcga
     3181 tggagcaggt gcaggcgaga gcgatgtcca aggcagccac tgcgaaggac cgcgtcgaca
     3241 gcgcgctcag ccgactcgag tcgatggtcg aggcgcggct gcgtaccgaa gcggaccgcg
     3301 ccgaggacct tgccaagcgg ctgagcaagc tcgagcgcca gcacgatgaa ctgaggaagg
     3361 tggcaatgga ggtcgaaggc cggctggagc gggcgatgga atacgtccga tcgctgctgg
     3421 cggctgatca gaagtgacgg cgaaaccgtc atcctgaggc cgacggccga aggatcttga
     3481 aagatccctc gctgcgctcg ggatgacagg atagtttgaa agtcccctca acgcctgcaa
     3541 aggcgcaaaa acaggagtag cggaaaatgc cgcaggtctc gattcagatc gccaatcgca
     3601 tctacgaact cgcctgtggc gacggcgagg aagagcgggt ccaggaactg gccgcttatg
     3661 tcgacgaaaa agtcggcgaa ttgcgcaagc agctgcccgg cgcgcctgaa atcaagctga
     3721 tggtcttcgc ctcgctcatc ctggccgatg agagccggga agcgcgcggc atggccaagg
     3781 ccgcggagag cgcgcgcgcc agcgccaccg acagcgccga gacgctggcc acggcgctcg
     3841 aggacctgat cacctcgcgc gtcgacaaaa tgggcaagaa agtgagcggc gcggcctgac
     3901 tataggcccc ggcgcgcatt gcggccgccg ctccgagtgc ctagattggt ctcggggcgg
     3961 atttctgcgc ggtgcgtggt tcgcttaaaa ccccggggcc aataagaact cctgggaact
     4021 gttcctggcc ttgaccgtgg tcttggctac acggtgccca cctgcttacg caggccttgg
     4081 aggttctacg agccacggcc catcgtggag ccgccccact ttgtttcttc cgacatgacc
     4141 ctgttcgacg acaagcgcac gctgcggagc gccatgctgg cctggcgggc tgcgctcgcc
     4201 gaggacgagc ggcgcgccgc cgccgaggga ttgctggcga gcctgcggcg cgagatgccg
     4261 ttcgagacgc cggcggtggt ctcgggcttc tggccgatca aggatgagat cgacatccgg
     4321 ccgttgctga tcgagctgtt caatgtcggc tgccagttgg cgctgcccgt cgtgcagggc
     4381 cgcggcaagc cgctgttgtt tcgcgcctgg cggccgggcg atcccctcga agcgggcgta
     4441 ttcggcaccc tgcagccttc ggcgcggcgc gagaccctgg agcccgatgc gctgatcgtg
     4501 ccgctgctcg cctgcgacga ggaaggatgg cgcttgggct atggcggcgg attttacgac
     4561 cgcacgcttg gcggcctcag ggcgcgccgc aacgtgacgg cggtcggagt gggcttcagc
     4621 gcgcaactcg tgcccgaggt tccgcacggt cccgacgatc aacgactcga ttggttgttg
     4681 accgacaagc gtgcttgcgc ctttgtctga ggcatgaagg ttctgttttg tggcgacatc
     4741 gtcggccgcg ccggccgcga tgccgtgatc aaggaagtac cgcgcctgcg ccgcgagctc
     4801 ggcctcgatt tcgtcgcggt caatggcgag aacgcggcgg cgggcttcgg catcaccgcc
     4861 aagatctgca ccgagctgca cgaggccggc gtggattgca tcacgaccgg aaaccatgtc
     4921 tgggaccagc gcgagatcct gtcctacatc gcccaggaca agcggctgtt gcggccgatc
     4981 aacttcccgc ccggcacccc gggctggggc gccaacctgt ttcagaccgc gcgtggccag
     5041 aagatcctgg tgctgaacgt catgtgccgc ctgttcatgg acgcgctcga cgatccgttc
     5101 cgcgccgtcg atgccgagct ggccaagtac gcgctggggg gctcggcgca cttcatcctg
     5161 gtcgatgtcc atggcgaggc gaccagcgag aagcagtcga tgggccacta ttgcgacggc
     5221 cgggtgtcgg cggtgctggg tacgcacagc cacatcccga cggccgactc ctggatactg
     5281 cccggcggca ccgcctatca gaccgatgtc ggcatgtgtg gcgactacga ttcggtgatc
     5341 ggcatgaaaa aggacatcgc cgtgcagcgc ttcctgcgca aaatgcccgg cgagcgcctg
     5401 gcgccggccg aaggcgaggg cactttgtgc gcggcggtgg tggaaaccga tgaccggacc
     5461 ggcctggccc gctcgatccg ccctctccgg ctaggcggcc ggctgcctcc aaccggctag
     5521 attgcagcat cttgtatccc gcgggcccta tttctaccta ttagaggtag cttgaagagc
     5581 ctcgttgacg gcttggggaa aaaccggcac ccttttgatg ttaaacgatt tttcgccgca
     5641 ttggcggact gtcttcaagg ttagaggggg cgtcggaatc taggttccga cgttttttag
     5701 cgggggcttc ggcccccgcc tttttttgtc ccccgtcgat tgcgcggtct ctaacactcc
     5761 caaaacccac gagaagtggt ataggcggcc catcaagtca ctgaatctgg ttgattgggc
     5821 gatggcgggc cattcgcagt tcaagaacat catgcaccgc aaagggcgcc aggacgccca
     5881 gcgggccaag atcttcacca agctgatccg cgaaatcacc acggcggcgc ggctgggcgc
     5941 ggccgatccc aacgccaatc cgcgcctccg cgccgccatg atcgcggcgc gcgagaacaa
     6001 catgacgcgc gataccatcg atcgtgcgat caagcgcggc tcgggctcgg atgccgaagc
     6061 caactacgaa gaggttcgct acgagggcta cggtccgggc ggcgtggcgc tgatcgtcga
     6121 ggcgctgacc aacaaccgca accgcacggc gggcgaggtc cgatcgagct tcagcaagta
     6181 cggcggcaat ctcggtgaga ccaacagcgt gtcgttcatg ttcgaccggc tgggcgagtt
     6241 ccgcttcccg ctcaaggccg ggaccgccga cgaggtcctt gagaaagcga tcgacgctgg
     6301 cgccgacgac gtggtgagcg gtgacggcga ggaggccacg cacg
//
LOCUS       DASWGA010000773         2198 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1989417, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000773 DASWGA010000000
VERSION     DASWGA010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1989417"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..932)
                     /locus_tag="VF991_18070"
     CDS             complement(138..932)
                     /locus_tag="VF991_18070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558405.1"
                     /translation="MLAINNIEVVYDRVILVLKGVSIDVGEGSITTLLGANGAGKTTT
                     LKAISGVLNSERGEVTKGTIQFAERRIDGMPAHEVTRLGIVQVFEGRRVFENLTAEEN
                     LVAGGHVQKHSASVKQGIELVYSYFPKLKERRHQLSGYLSGGEQQMLSIGRALMSQPR
                     VVLLDEPSLGLAPMLVEEIFGIVGRLVKQEKLSVLLVEQNAAMALAVADHGYVMENGR
                     IVLEGPADKLRDNSDIKEFYLGLNEGGARKSYRDTKHYKRRKRWLS"
     gene            complement(988..>2198)
                     /locus_tag="VF991_18075"
     CDS             complement(988..>2198)
                     /locus_tag="VF991_18075"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558406.1"
                     /translation="TAVLAVGGAQAFAQSKEVVFGLQCDRTGPTAPVGTVLCPGYQDY
                     IALVNSKGGVEGYKIKVLEIDNEYKVPPAMEAHERFKKEGAVVEFVYGTPQAAALGKK
                     LEEDKILGTTPGFGTSAAADGKRFPYIFPIAASYWSQAGAAVEFVKEKLGTLKGKKIA
                     YLFYDNPAGKEPLAVLEELAKSEGFELRTFAVPAPGLEMGAQVLDITGRYKPDFIIAH
                     LFGRSPSVSIKELKGKGYPLSKVISLVWGSAEADIIAAGGMGIAEGYNTLQFAGVGKD
                     FPVLKEIEAMYKAQGKPAPKEMDSTVYYNRGVLSAALHVEAVRNAIKAKGGAAPTGED
                     VKKGMESIKGFTLGGFVPPMELSPTDHEGGGWVQIWTVKGGKLVKVKDWFQGYRPVIQ
                     KQVAADASKS"
BASE COUNT          350 a          725 c          691 g          432 t
ORIGIN      
        1 gacctcatgc tgaggagcgg cccgcagggc cgcgtctcga agcatgggtt gcagacatgg
       61 cgcctgttgc cgacccttcg agacgggcgc tgcgcgccct cctcagggtg aggcaaattg
      121 ttagccgctg caaacgacta agacagccag cgcttgcgtc gcttgtagtg cttggtgtcg
      181 cggtaggatt tgcgcgcccc gccctcgttg aggccgaggt agaattcctt gatgtcggaa
      241 ttgtcgcgca atttgtcggc cggcccttcc agcacgatgc ggccgttctc catgacatag
      301 ccgtgatcgg cgacggccag cgccatggcg gcgttctgct cgaccagcag gaccgagagc
      361 ttctcctgct tcaccagccg gccgacgatg ccgaagatct cctcgaccag catgggcgcc
      421 agaccgagcg agggctcgtc gagcagcacc acgcggggtt ggctcatcag tgcccggccg
      481 attgacagca tctgctgctc gccgcccgac aggtagcccg aaagctggtg tcgacgctcc
      541 ttgagcttgg gaaagtacga atagaccagc tcgatcccct gtttcaccga ggcgctgtgc
      601 ttctggacgt ggccgccggc gaccagattc tcctctgcgg tcaggttctc gaagacgcgg
      661 cggccttcga acacctggac gatgccgagc cgggtgacct cgtgggccgg catgccgtcg
      721 atgcgccgct cagcgaactg gatcgtgccc ttggtgacct ccccgcgctc gctgttcagg
      781 acgccggaaa tcgctttcag cgtcgtcgtc ttgccggcgc cgttggcgcc cagcagggtc
      841 gtgatcgaac cctcgccgac gtcgatcgac acgcccttca ggacgaggat gacgcggtcg
      901 tagacgacct cgatgttgtt gatcgccagc atggccattc cggtgggggt tcgggcggcg
      961 aaaagctcgc cgcccgcccg tcacgcgtca ggacttcgag gcgtcggctg caacttgttt
     1021 ctggatcacc gggcgatagc cctggaacca gtccttcacc ttcacgagct tgcctccctt
     1081 gacggtccag atctgcaccc agccgccgcc ttcatggtcg gtcgggctga gctccatcgg
     1141 cggaacgaag ccgcccaagg tgaagccctt gatcgattcc atgcctttct ttacgtcctc
     1201 gccggtgggc gcggcaccac ccttggcttt aatagcgttg cggaccgcct cgacgtgcag
     1261 cgccgcgctc aggacgccgc ggttgtagta gacggtcgag tccatttcct tgggcgcggg
     1321 cttgccctgg gccttgtaca tggcctcgat ctccttcagg accgggaagt ccttgccgac
     1381 gccggcgaac tggagggtgt tgtagccttc cgctataccc atgccgccgg cagcgatgat
     1441 gtcggcctcg gcgctgcccc aaacaagcga gatcactttg ctgagcgggt agcccttgcc
     1501 cttcaactcc ttgatggaaa ccgacggcga gcgcccgaac agatgcgcaa tgatgaagtc
     1561 gggcttgtag cggccggtga tgtcgaggac ctgcgcgccc atttccaggc cgggcgccgg
     1621 aacggcaaag gtgcgcagct cgaagccttc ggacttggca agttcttcca gaacggccag
     1681 tggctccttg cccgccggat tgtcgtagaa gagataggcg atcttcttgc ccttgagggt
     1741 gcccagcttc tccttgacga actccaccgc cgcaccggcc tgcgaccagt agctggcggc
     1801 gatcggaaag atgtagggga agcgcttccc gtcggccgca gcggacgtgc cgaaacccgg
     1861 agttgtgccg aggatcttgt cctcctccag tttcttgccc agcgcggcgg cctgcggcgt
     1921 gccatagacg aattccacca ccgcgccttc cttcttgaag cgctcgtggg cttccatcgc
     1981 cggcggcacc ttgtactcgt tgtcgatctc gaggaccttg atcttgtagc cctcgactcc
     2041 gcccttgctg ttcaccaggg cgatgtagtc ctggtagccc gggcacagca cggtgccgac
     2101 cggcgccgtc gggccggtac ggtcgcactg taagccgaac acgacttcct tgctctgggc
     2161 gaaggcttgc gccccgccga ccgccaggac cgcggtcg
//
LOCUS       DASWGA010000774         1587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_89518, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000774 DASWGA010000000
VERSION     DASWGA010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89518"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VF991_18080"
     CDS             <1..255
                     /locus_tag="VF991_18080"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase domain-containing
                     protein"
                     /protein_id="HEX9558407.1"
                     /translation="AEVAQGLGAAAKVLAALEALAAEPFLVGPAISLADFHLGVMIAY
                     FTMAPEGSALLDNHARLAAWWRRLGRRPSFAATDPGLPRA"
     gene            339..1049
                     /locus_tag="VF991_18085"
     CDS             339..1049
                     /locus_tag="VF991_18085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HEX9558408.1"
                     /translation="MTLPMWRRLVPVAILLLGLALFLLLGLERYFSFEMLSRNHAALA
                     SWVSQHAVAAALLYVLAYALVVAFSLPIAVVITPVGGFLFGVWLGAALSVIGATVGSI
                     AVFLAARTAFYDLFHARAGRALARLEDGFRRDSFNYLLFLRLVPVFPFWLVNIVPALL
                     GMKLGPYALATLIGIIPGALVYSSVGAGLGVLIDSGEMPDSGIIFQWRILLPLLGLAV
                     LALVPVLYTRLRGRSTSP"
     gene            1051..>1587
                     /locus_tag="VF991_18090"
     CDS             1051..>1587
                     /locus_tag="VF991_18090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006934273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9558409.1"
                     /translation="MSDVLTPDVCIVGAGSAGLVAAAGAAQLGLAVVLIERAEMGGDC
                     LNYGCVPSKALIAAAKAAQAQRSSGPFGVAPVEPRVDFGRVMDHVHQVIAAIAPNDSV
                     ERYEKLGVRVLKEEARFIGRSELQAGPYHIKSRRIVLATGSRPTAPPIPGLADVPYLT
                     NETVFANRTLPDHLIVIGG"
BASE COUNT          201 a          543 c          528 g          315 t
ORIGIN      
        1 gctgaggtgg cgcaggggct tggcgcagcc gccaaggttt tggccgcgct cgaggctttg
       61 gcagccgagc cgtttctcgt cggaccggcg atttcgctcg ccgactttca tctcggagtc
      121 atgatcgcct acttcacgat ggcgcccgag gggtcggcct tgctcgacaa ccacgcccga
      181 cttgccgcgt ggtggcgccg cctcggccgg cggccgagtt ttgccgcgac cgatcccggc
      241 ctgccccgcg cctgatcggt caccgcagcg tgacagcatt tgctttgagg ccgcagcctt
      301 gagggccaat atcgatggca agccacgcga aaggcaacat gaccctcccg atgtggcgcc
      361 ggctggtgcc ggtggcgatc ctgctgctgg gcttggcgct gttcctgctg ctcggtctcg
      421 agcgctactt ctccttcgag atgctgagcc gcaatcacgc ggcgctcgcc tcgtgggtca
      481 gccagcacgc cgtggcggcg gcgctgcttt atgtgctggc ctatgcgctg gtggtggcct
      541 tctcgctgcc catcgctgtc gtgatcacgc cggtcggcgg cttcctgttc ggcgtgtggt
      601 tgggcgccgc cctgtcggtg atcggcgcga ccgtgggctc gatcgcggtg ttcctggccg
      661 cgcgcaccgc cttctatgat ctgttccatg cccgcgccgg ccgcgctttg gcgcgactgg
      721 aagacggctt tcgccgcgac agcttcaact atctgttgtt cctgcgactg gtcccggtgt
      781 ttcccttttg gctggtcaat atcgtgccgg cgctgctcgg catgaagctc ggcccctatg
      841 cgctggcaac cctgatcggc atcattccgg gcgcgctcgt ctattcgagc gtcggcgccg
      901 ggctcggcgt gttgatcgac agcggggaaa tgcccgattc cggcatcatc ttccaatggc
      961 gcattctgct gccgttgctc ggtctggccg tcctggcgct ggtgcccgtg ctttacacgc
     1021 gcctgcgcgg ccgcagcacg tcgccgtgag atgagcgatg tcctgacacc cgatgtctgc
     1081 atcgtcggcg ccggctcggc cggcctggtc gccgccgccg gcgccgcgca attgggcctc
     1141 gccgtcgttc tgatcgagcg cgccgagatg ggcggcgatt gcctgaacta tggctgcgtg
     1201 ccgtcgaagg cgctgatcgc cgcggccaag gcagcccagg cgcaacgcag cagcggccct
     1261 ttcggggtgg cgccggtcga gcctcgcgtc gacttcggcc gggtcatgga tcacgtccac
     1321 caggtgatcg ccgccatcgc gcccaacgat tcggtcgagc gctacgaaaa gctcggcgtg
     1381 cgggtcctga aggaagaagc gcgtttcatc ggccgcagcg aattgcaggc cggcccgtac
     1441 catatcaaaa gccggcgcat cgtgctggca acgggatcgc ggccgacggc gccgccgatc
     1501 ccgggcctgg ccgacgtgcc ctatctcaca aacgagacgg tcttcgccaa ccgcaccctg
     1561 cccgaccatc tgatcgtgat cggcggc
//
LOCUS       DASWGA010000775         2800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1744420, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000775 DASWGA010000000
VERSION     DASWGA010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1744420"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..719
                     /gene="fabG"
                     /locus_tag="VF991_18095"
     CDS             <1..719
                     /gene="fabG"
                     /locus_tag="VF991_18095"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: protein motif:HMM:NF004198.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEX9558410.1"
                     /translation="GKVAIVTGAGRGIGEGIARKLAKEGAIVVCADVNESDATSVATS
                     LNPAGLGVRLDVSKASDCDAVVTNAHERYGRLDILVNNAGINRDAMLHKMTDEQWHQV
                     IAVDLTGVFFMTRAASRIMRAAGAGRIVNISSASWMGNVGQANYAAAKAGVVGLSRTA
                     AKELARSQVTVNAICPGFIDTVMTRSIPEAIREKQVEKIPLGRAGQPADVAALVAFLA
                     SDEAGYITGEVINVGGGYVL"
     gene            716..2266
                     /locus_tag="VF991_18100"
     CDS             716..2266
                     /locus_tag="VF991_18100"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX9558411.1"
                     /translation="MRLASVQEAVAAIPDGSTVAVDGFTLMGVAEALYEGIENHFRDT
                     GHPRDLVIVHAAGQSNRKIGFEHFAVEGLAKRIVGSHWGLMPRMSAFLGQGLAEAVCL
                     PQGQISTLYRSIAAGRPGNLTRIGLGTFVDPRIEAGKVNQPARDHAPDYVAIEKIDGQ
                     EFMFYRSFRIDVGIFRASAVDQDGNCSLAEEAVTLDALAIAQAAHNSGGLVICQAKKL
                     VARGAIPPKHVAVPACLVDLVVQAPDPERQHRQSDGVFFDERYISSSSGAELPRAEFS
                     TRLAIGRRAIRYLHRGDIVNIGTGIPGDSVGPALAEAGLSDAITLTVESGVYGGVPAG
                     GVDFGITAYPTAIIAHASQFDFYNGGGLDATFMGAGQVDREGNVNVSRLGGRVIGAGG
                     FIDITQSARLVCFCFTLEGKREKFVTQVEHLTFSAEQARKNNQQVLYVSERAVFRLEP
                     EGLALIEIAPGVDVKSVLDRMPFPVRVQEPVASMPEDIFRPTVAPFDLPAHPAGKMRH
                     PGAVSSGG"
     gene            2244..2317
                     /locus_tag="VF991_18105"
     tRNA            2244..2317
                     /locus_tag="VF991_18105"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2278..2280,aa:Ile,seq:cat)
     gene            2330..2704
                     /locus_tag="VF991_18110"
     CDS             2330..2704
                     /locus_tag="VF991_18110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558412.1"
                     /translation="MRKQYHFWPGERGLDAWDVDRLIELTKDAPIEEVVLTDLPEIDS
                     VYWFDSSDAPTVRKIVGHFRLMQKVDLSYPIIIGPDNRIMDGMHRVARALVEGRKTIT
                     AVRLLKVPDPDYRDCRPDELPY"
BASE COUNT          532 a          865 c          875 g          528 t
ORIGIN      
        1 caggcaaagt cgcgattgtt accggagcgg gccgcggcat cggcgagggg atcgcccgca
       61 agctggccaa agagggcgcc atcgtcgtct gcgccgatgt gaacgagagc gacgcgacga
      121 gcgtcgcaac gagtctgaat cccgccggcc tcggcgtgag acttgacgta tcgaaggcct
      181 ccgactgcga tgccgtcgta accaacgcgc acgagcgcta cggccgtctg gacatcctgg
      241 tgaacaacgc ggggatcaat cgcgacgcca tgctgcacaa gatgacggac gagcaatggc
      301 accaggtcat cgccgtggat ttgaccggcg tgttctttat gacccgcgcg gcgagccgca
      361 tcatgcgcgc cgccggagcg ggtcggatcg taaatatttc gtctgccagt tggatgggca
      421 atgtcggcca ggcgaactac gcggcggcca aggcgggtgt cgtcggcctc agccgaaccg
      481 ccgcgaaaga gctcgcgcgt tcccaggtca ctgtcaatgc catctgcccc ggcttcatcg
      541 acaccgtcat gacccgaagc attcctgagg cgatccgcga aaagcaggtc gagaagattc
      601 cattgggccg cgcgggccag cccgccgacg tagccgccct cgtcgcgttt ctagcgtccg
      661 acgaagcggg ctatatcacg ggcgaagtga tcaacgtcgg cggcggctac gtgttgtgag
      721 actcgcctcg gtccaggagg ccgtggcggc gatccccgac ggatcgaccg tcgccgtcga
      781 cggcttcacg ctgatgggcg tggccgaggc cctctacgaa ggcattgaaa atcatttccg
      841 cgataccggc catccgcgag atctcgtgat cgtgcacgcc gcgggacagt ccaatcgcaa
      901 gattggcttc gagcacttcg cggtcgaggg tctggcgaag cgcatcgtcg gctcgcactg
      961 gggcctgatg ccaagaatgt ccgcgttctt gggccagggc ctcgccgagg ccgtctgcct
     1021 gccacaggga caaatatcga cgttatatcg ctcaattgcc gccggccggc ctggaaacct
     1081 gacgcgtatt ggcctgggta cgttcgtcga tcccaggatc gaggcgggca aagtcaacca
     1141 gcccgcccgt gaccacgcgc cggactacgt cgctatcgag aaaatcgacg gccaggaatt
     1201 catgttctat cgcagcttca ggatcgacgt cggcattttt cgtgccagcg ccgtcgacca
     1261 agatggcaat tgttccctgg ccgaagaggc ggttaccctc gatgcgctgg cgatcgccca
     1321 ggccgcgcat aacagtggcg gtctggtcat ttgccaggcg aagaagctcg tcgcccgtgg
     1381 ggcgatcccg ccaaaacacg tcgctgttcc cgcgtgtctc gtcgatctgg tcgtccaggc
     1441 gcccgatcca gaacgccagc atcgacagtc agacggcgtg ttcttcgacg agagatatat
     1501 ctcgtcgtct tcgggcgcgg agttgccgcg cgctgaattt tccacgcggc tggcgatcgg
     1561 ccgccgtgca attagatatt tgcaccgggg cgacatcgtg aacatcggca ccggcattcc
     1621 gggcgatagc gtcggccctg cgctggccga agcagggttg tccgacgcga ttactctcac
     1681 ggtcgaatca ggcgtctacg gcggcgtgcc ggccggcggc gtcgacttcg gcatcacggc
     1741 gtatccgacc gcgattatcg cgcacgctag ccagtttgat ttttacaacg gtgggggact
     1801 ggacgccacg ttcatgggcg ccggccaggt cgatcgcgaa ggcaacgtga atgtctcccg
     1861 tctcggtggc cgcgtgatcg gcgccggcgg ctttatcgat ataacccaga gcgcaagact
     1921 cgtgtgtttt tgctttacgc tcgaaggcaa gcgtgaaaaa tttgtcacgc aggtcgagca
     1981 tcttacgttc agtgccgagc aagcgcgaaa aaataatcag caagtcctgt acgtgagcga
     2041 gcgtgccgtc ttccggctcg agcccgaggg cctggccctg attgagatcg cgccgggtgt
     2101 cgacgtcaag agtgtcctgg atcgaatgcc ttttccagtt agagtccagg agccggtggc
     2161 aagcatgccg gaagatatct tccggccgac cgtggcgccg ttcgacctgc ccgcgcatcc
     2221 cgcaggcaaa atgagacatc caggggccgt tagctcaggt ggttagagcg gccggctcat
     2281 aaccggttgg tcgaaggttc gagtccttca cggcccatac cattctccta tgcgtaagca
     2341 gtatcacttc tggcccggcg agcgcggcct ggatgcttgg gacgtcgatc ggctaatcga
     2401 gcttacgaag gacgcgccca tcgaagaggt tgtgcttacc gacctccccg aaatcgactc
     2461 ggtgtactgg ttcgactcgt cggatgcgcc gaccgtaagg aagatcgtcg ggcacttccg
     2521 actaatgcag aaggttgacc tcagttaccc gatcatcatt ggcccagaca accgaatcat
     2581 ggacggcatg caccgggttg cccgggcgct ggtcgaaggc cggaagacga tcaccgccgt
     2641 ccgcttactg aaggtccccg atcccgatta ccgcgactgc cggcccgacg agttgccgta
     2701 ttgagcgaac tgcccttgca tggctccatg cttcctaaaa gaccttctcc atgcagacgc
     2761 ttgacggcga cgtcaggtac tcgccccagc acccgatctc
//
LOCUS       DASWGA010000776         1707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1481259, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000776 DASWGA010000000
VERSION     DASWGA010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1481259"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..>1707
                     /locus_tag="VF991_18115"
     CDS             86..>1707
                     /locus_tag="VF991_18115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein"
                     /protein_id="HEX9558413.1"
                     /translation="MAINSVGFNASILGQSVLQLKNQLATLQSQLTTGTKSTTYAGMG
                     VNEGFAIAARSQLANISAFSDTMSNINTDIGIANTALQSMVDIGTTVLNSANGSSQAL
                     NSAGQSIAQQTATSQLSSMLGILNMQAGDRYLFSGSAINTPSVASADNIINGTTTQAG
                     LKQVISERAQADGTSGLGRLVLSSPTPTSVQVAEDVAGSPFGLKLSAVSSTLTGATVT
                     GPAGSPAAVSVDLGATNPNNGDQVSFAFKLPDGTTESIQLTATTTNPPPTGSFLIDPP
                     PASSTTTTAANLKTALNTAIGTLANTSLVAASAVEAGNDFFNTAGTATGSVVNNKAAT
                     PAPITGATLLSGGAGTDSLATNFAAGDTITVNGTPITFVASGAVGGNQVNVTDTVQTL
                     LTKIDAISGTSTPSTISGGVIALHTDNAAGFTVTSSNPAAFGALGFGATATATQPPLR
                     VSGSPLSSATSLVSGTPANTISWYTGEAGQGSARATATARVDQSVTVQYGARANEAAI
                     RSQLQTLAVFAAVTTSTTNPNAAAQVSALSQRV"
BASE COUNT          325 a          568 c          521 g          293 t
ORIGIN      
        1 tcctatgcgg ccaatgcgca tgtgatgtct gtggttcaga ccatgatgac cagcttgatg
       61 caggtccagt tgtaaggcga tcgatatggc aatcaatagc gtcggtttta atgcttccat
      121 tctcggccag tcggtgctgc agctcaagaa ccagctggcg acgcttcagt cgcagctgac
      181 gaccgggaca aaatcgacaa cctatgcggg gatgggcgtc aacgagggat tcgccatcgc
      241 ggcgcgctcg cagttggcga acatttccgc gttcagcgat accatgagca acatcaatac
      301 cgacatcggc atcgccaaca ccgcgctgca gtccatggtc gatatcggca cgacggtgct
      361 caacagtgcg aacggttcgt cgcaggcgtt gaacagcgcc ggacagtcca tcgctcagca
      421 aaccgcgacg tctcagctgt cctcgatgct cggcattctc aatatgcagg cgggcgaccg
      481 ctatctgttt tcgggcagcg ccatcaatac gccgtcggtc gcctctgctg acaatattat
      541 caatgggacc accacccagg ccggattgaa gcaggtgatt tcggagcgtg cgcaggccga
      601 tggcaccagc ggtctcgggc gtctcgttct ctcttcgccg acgccgacct cggtgcaagt
      661 ggcggaggac gtcgccggct cgccgttcgg cctgaagttg agtgcggtct cgtcgacgct
      721 gacgggggcg accgtaaccg gccccgcggg atcgccggcc gcggtttcgg ttgacctcgg
      781 cgccaccaac ccgaacaacg gcgatcaggt gagttttgcg ttcaagctgc cggatggcac
      841 gactgaatcg attcagttaa cggcaaccac cacaaatcct ccgccgaccg gaagcttttt
      901 gatcgacccg ccccccgcca gctcgacgac gacgacggcg gccaacctga aaacggcgct
      961 gaacacagcg atcggcacgc ttgccaatac ctcgctggtg gccgcgtcgg cggttgaggc
     1021 cggcaacgat tttttcaata cggccggaac ggcgacagga agcgtggtca acaacaaggc
     1081 tgcgacccct gcgccgatca ccggcgcgac gctgttgtcc ggtggcgcgg gcacggactc
     1141 gctggccacc aacttcgcgg ccggcgacac catcaccgtc aacggcaccc ccatcacgtt
     1201 tgtcgcctcc ggcgcggttg gcggcaacca ggtcaacgtc accgacaccg tccagacgct
     1261 gttgacaaaa atcgatgcga tcagcggcac ctcgactccg tcgaccatca gcggcggcgt
     1321 gatcgcgctg cacaccgata acgccgcggg cttcacggtc acgagctcga acccggccgc
     1381 gttcggggcg ctcggcttcg gcgccaccgc gacggcgacg cagccgccgc tgcgggtcag
     1441 cggctcgccg ttgagttcgg cgacatcgct ggtcagcggc acgccggcca acacgatttc
     1501 ctggtacacc ggcgaagccg gccagggatc cgcccgtgcg acagcgacgg ctcgcgtcga
     1561 tcagtcggtg accgttcagt acggggcgcg cgccaacgag gcagccattc gttcgcagct
     1621 tcaaacgctg gcggtcttcg ccgcggtcac gacctcgacg acaaatccaa acgccgccgc
     1681 gcaggtctcg gcactcagcc agcgggt
//
LOCUS       DASWGA010000777         1554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_461912, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000777 DASWGA010000000
VERSION     DASWGA010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461912"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VF991_18120"
     CDS             <1..651
                     /locus_tag="VF991_18120"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF003814.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEX9558414.1"
                     /translation="VVMVDTVKLCRQNGVSIGAHPGFADLQGFGRRVINLTIKELEAN
                     IAYQIGALQAIAALHGAKVTHMKPHGMMANMSAESAEMSEAICRATKAVDRDLIFLAQ
                     ANTEQGKAARKMGLRVAEEVFADRTYGDNGLLTPRKEANSMIKDPAQAVANVRRMVDE
                     QAIHSTSGKRIPCQVDSICVHGDGPTAVAVSKAVRDGLEAAGIRIVPLPDLPNLKH"
     gene            760..1257
                     /locus_tag="VF991_18125"
     CDS             760..1257
                     /locus_tag="VF991_18125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX9558415.1"
                     /translation="MNRFVVAAVAAAFAVSPLAVMGQAPAPPPPYGVGIGFDAAKKAL
                     AAAEAEAKKNNWAVAIAIVDSSAKLAAFSKAEGTQHASVDIAIGKAVTANNFRRPTKA
                     LQDGIAQGGVGLRILGLPGVTPLEGGVPIVVDGKIVGAIGVSGVMSNQDAEVAMAGAA
                     AAAAK"
     gene            1355..1510
                     /locus_tag="VF991_18130"
     CDS             1355..1510
                     /locus_tag="VF991_18130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558416.1"
                     /translation="MAAFGKAQGMVGSTPTVMNAILDALWPLGVRNIRMPATPHRVWR
                     AIPDARR"
BASE COUNT          278 a          516 c          530 g          230 t
ORIGIN      
        1 gtggtgatgg tcgacacggt caagctctgc cggcagaacg gcgtcagcat cggcgcccat
       61 cccgggttcg ccgacctgca gggtttcggg cggcgggtga tcaacctcac gatcaaggag
      121 ctcgaggcca acatcgccta ccagatcggc gcgctgcagg cgatcgcggc cctgcacggc
      181 gccaaggtca cgcacatgaa gccgcacggc atgatggcca atatgtcggc cgagagtgcc
      241 gagatgtcgg aagcgatctg ccgcgccacc aaggcggtcg accgcgacct gatcttcctt
      301 gcccaggcca acaccgagca gggcaaggcg gcgcgcaaga tgggcctgcg cgtggccgag
      361 gaagtgttcg ccgaccgcac ctacggcgac aacggcctgc tgacgccacg caaggaagcc
      421 aactcgatga tcaaggatcc ggcgcaggct gtggcgaatg tccggcgtat ggtcgatgag
      481 caggcgatcc actcgacctc gggcaagcgc atcccctgcc aggtcgattc gatttgcgtg
      541 cacggcgacg ggccgaccgc cgtcgccgtc tccaaggcgg tgcgcgacgg gctggaggcc
      601 gcaggcatcc gcatcgtgcc gctgcccgac ctgcccaacc tcaagcactg aggcaggtct
      661 ttcaccggaa agtgaccgct tccggccctg cgccgcgttt gggcgacgtt catagtcccg
      721 gcaccaccca aagaggtggc acaaccggga gaaaacgtga tgaacaggtt cgtcgtcgcg
      781 gcagtcgctg ccgctttcgc tgtgtcgccg ctcgccgtca tgggccaggc accggccccg
      841 ccgccgccct atggcgtcgg catcgggttc gatgcggcca agaaagcgct cgccgctgcc
      901 gaggcggaag ccaagaagaa caactgggcg gtcgccatcg ccatcgtcga cagctcggcc
      961 aagctcgccg ccttctccaa ggcggagggc acccagcatg ccagcgtcga catcgccatt
     1021 ggcaaggcgg tgaccgccaa caacttcagg cgtccgacca aggcgctgca ggacggcatc
     1081 gcccagggag gcgtcggtct gcgcatcctt ggcctgcctg gcgtgacgcc gctggaaggc
     1141 ggcgtgccga tcgtggtcga cggcaagatc gtcggagcca tcggcgtatc gggtgtgatg
     1201 agcaaccagg atgccgaagt cgccatggcc ggagccgctg cagcagcggc gaaatagcgg
     1261 cgggaccttc cgtcgcgctg gcttgccgga cgctcgccgc tatagtccgc ccgtctcccg
     1321 accctggtga ggtcgggacg gtcaggagtg cgtaatggca gcgttcggca aagcacaggg
     1381 catggtgggc tcgacgccca cggtgatgaa cgccatcctg gacgcgctgt ggccgctcgg
     1441 cgtgcgcaac atccggatgc cggcgacgcc gcatcgcgtc tggcgcgcca tcccggacgc
     1501 gcggcgttga cgagaggccg ggatgaagca gcgcatcttc agcttgatat cgat
//
LOCUS       DASWGA010000778         6298 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2371797, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000778 DASWGA010000000
VERSION     DASWGA010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6298
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2371797"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1138)
                     /locus_tag="VF991_18135"
     CDS             complement(<1..1138)
                     /locus_tag="VF991_18135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX9558417.1"
                     /translation="MSINDPLSPIRLQLMWDRLIAVVEEQALALIRTGFSTSTREAGD
                     LSAGVFDLDGAMLAQAVTGTPGHINSMARAVRHFLAKFPAKTMKEGDIFLTNDPWKGT
                     GHLHDFTFVTPTFRRGKMVALFASTCHVVDIGGRGMTTDARQVYEEGLYIPLMRFARE
                     GKVDDTLIEIVGANVREPIQVVGDLYSLATCNEIGCRRLIEMMDEFAIDDLDRLGRHV
                     LEKSRQASLEAIRKIKPGEYKFTMRVDGADKPIDIVAAMKIGEGGIDVDFGGTSGVSA
                     FGINVPVCYTEAYASFGVKCIVAPKVPNNEGSLSVIRVTAPVDSILNAQKPAPVAARH
                     VTGQMLPDVMFGCLHQALGGSVPAEGTSCLWNLFALGGPGSTDGD"
     gene            complement(1135..3231)
                     /locus_tag="VF991_18140"
     CDS             complement(1135..3231)
                     /locus_tag="VF991_18140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004669974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9558418.1"
                     /translation="MDVRVNDRGRLAVDIGGTFTDLCLEWNGKLTSVKVLTTSRAPEE
                     GVLTGMEEILKQTRIKPAELGLVIHGTTLATNAIIERKGARTALVVTEGFRDSIEIAF
                     EHRFEQYDIFMQKPPPLVPRDLRFGIPERMDGRGNVLIPLDEAAVRALAPKLKAAGVE
                     AIAIGYMHAYLDGKHERRTRDILAKTLPGVSITLSSEVSPEIREYERWSTAVANAYVQ
                     PVMARYLGRLDDALRAKGFVCPLFMITSGGGLAALETARKFPIRLVESGPAGGAILAA
                     ALARQCGLDKVLSFDMGGTTAKICLIDHGEPQHSRTFEVARQYRFLKGSGLPLRIPVI
                     EMVEIGAGGGSIASVDSLSRVHVGPESAGAEPGPASYGRGGTEPTVTDADVVLGRIDP
                     GYFAGGTIKLSPDKAGVAVDQAVGTPLGLKRRDAAFGVSEIVEENMANAARVHAVERG
                     KELQGRTMIAFGGAAPIHAARLAEKLGINRIMVPSGAGVGSAVGFLMAPVAYEVVRSR
                     YVQLDDDKFDPAYVNALFAEMRAEAEAVVKAGAPDAKLVETRTADMRYRGQGHEITVS
                     LPAGPFDRASRDKLVTLYEEGYATTFGRTIPGLGVEIMNWTLRLAAEQAALPKCPPQP
                     ADKPATARGKRPVYDAADQDMKDVPVYHRADLVIGSFVPGPAVIAEDETTTIVPKSFA
                     ARISPIGAILLEKVGT"
     gene            complement(3235..3969)
                     /locus_tag="VF991_18145"
     CDS             complement(3235..3969)
                     /locus_tag="VF991_18145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558419.1"
                     /translation="MTQPALELVSVTAGYGDVPIVRDFSAHLQAGTITTLIGGNGAGK
                     STLLRALYGTNRLFAGQIVFKGETIERLPPWERLKRGVGFVPQGRCNFPAMSVDENLK
                     MGCYTLPAASHQAAIGRVIGLFPMLRQKGRTEAGNLSGGEQQILEMAMVLLVEPTLLL
                     LDEPSLGLSPRMQGDVFATVQRIAAGGVTVLIVEQNVRGALLISDRALVMEQGRLFME
                     GPAAEVRTDPRIRQAYLGGNIQQTAA"
     gene            complement(3966..4763)
                     /locus_tag="VF991_18150"
     CDS             complement(3966..4763)
                     /locus_tag="VF991_18150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558420.1"
                     /translation="MSVLLEVVALRKSYAGVHALDGVSFAVEAGSVTGLIGPNGSGKS
                     TAIDCLSGFQKLDAGKVVLAGADITGRPAHHIARAGLMRTFQTVRVYERLSLSDNLAI
                     AHQQFDPATWIDEFLRTKRYRDAVDASEVRARELVELIGLQRYYEAEVGILSYGQKKL
                     VALAAALMPHPKIVLLDEPVAGVNPSRIREIEVALAQLNQAGETFLIVEHNVEFITNL
                     CHRVIVLDQGKKLAEGTAAEIHTDSRVLEAYLGMTPEMAEAEMRGAA"
     gene            complement(4760..5701)
                     /locus_tag="VF991_18155"
     CDS             complement(4760..5701)
                     /locus_tag="VF991_18155"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9558421.1"
                     /translation="MKLAVALIAALALAALPLLTSSNYIIGIGVSALVFTVAAAALNL
                     IYGFTGLLSFAQLGFWGIGGYATALTVVTFGGSFWLGLVWAALLNAVLALVVGFPTLR
                     TNRHAFVIVTLTFALLVTLIARDWVDLTRGPLGIPNLPPPTAWGYEFATTRQFYWIAW
                     AFAVAMLAFLYALCSSRIGRTLIAIKQNEPLVRAQGIAPMPYKLASFALSAAITGAAG
                     GVYCFYLRIIDPLFLDFYYMQTFLIIVIIGGAGSFWGVVVSGIALSALPEVLRFSADL
                     RMIIYGLILVIAMFVMPSGIAGWLRDRKLVRLREALR"
     gene            complement(5698..>6298)
                     /locus_tag="VF991_18160"
     CDS             complement(5698..>6298)
                     /locus_tag="VF991_18160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9558422.1"
                     /translation="ERSILVTLGLSIILIHVMQYVFTATPRLVDTQYGFEGVEIGSIR
                     ITWTRVIGAGAALAAFAGLYTVLRHSQFGRAMRAIAQNREAALMVGIRPLVVARNAVV
                     LAAGLCGLAGAAISPLQLVTPYMGQFLLFKAFALVIIGGLGNIPGAIVAAVALGLVES
                     WIGGFFEIAWQEAAVFVIMIVVLFVRPDGLFKRGGMRVG"
BASE COUNT         1057 a         2074 c         2181 g          986 t
ORIGIN      
        1 gatcgccgtc ggtggagccg gggccgccca gcgcaaacag gttccacagg cacgacgtgc
       61 cctcggccgg cacgctgccg cccagcgcct ggtgcaggca gccgaacatg acgtcgggca
      121 gcatctggcc ggtgacatgg cgcgccgcca cgggggcggg cttctgggcg ttcaggatcg
      181 aatcgaccgg cgcggtgacg cggatcaccg acagcgagcc ttcgttgtta ggcacctttg
      241 gcgccacgat gcatttcacg ccgaacgagg cataggcctc ggtgtagcag accggcacgt
      301 tgatgccgaa ggccgacacg ccggacgtgc cgccaaaatc gacgtcgatg ccgccctcgc
      361 cgatcttcat ggcggcgacg atgtcgatcg gcttgtcggc gccgtcgacg cgcatcgtga
      421 acttgtactc gcccggcttg atcttgcgga tggcctcgag cgaggcctgc ctggatttct
      481 ccaggacatg gcggcccagc cggtcgagat cgtcgatggc gaactcgtcc atcatctcga
      541 tcaggcgccg gcagccgatc tcgttgcagg tcgccagcga gtagagatcg cccaccacct
      601 ggatcggctc gcgcacgttg gcgccgacga tctcgatcag ggtgtcgtcg accttgccct
      661 cgcgcgcgaa tcgcatcagc gggatgtaga ggccttcctc gtagacctgg cgggcgtcgg
      721 tggtcatgcc gcggccgccg atatcgacga cgtggcaggt cgaggcgaac agcgccacca
      781 tcttgccgcg ccggaacgtc ggcgtgacga aggtgaagtc gtgcagatgg ccggtgccct
      841 tccacgggtc gttggtcagg aagatgtcgc cttccttcat ggtcttggcc gggaacttgg
      901 cgaggaagtg gcggaccgcg cgcgccatcg agttgatgtg gccgggcgtg ccggtgacgg
      961 cctgcgccag catggcgccg tcgagatcga acacgccggc cgacaaatcg ccggcttcgc
     1021 gcgtcgacgt cgagaagccg gtgcggatca gcgccagcgc ctgctcctcg acgaccgcga
     1081 tcaggcggtc ccacatcagc tgcaggcgaa tcggcgagag ggggtcgttg atgctcatgt
     1141 tcccactttc tccaacaaaa tggcgccgat cgggctgatc cgggcggcga agcttttagg
     1201 cacgatggtc gtcgtttcgt cctcggcgat gaccgccggg ccgggcacga agctgccgat
     1261 caccaggtcg gcgcgatgat agaccggcac gtccttcatg tcctgatccg cggcatcgta
     1321 gaccggccgc ttgccgcgcg ccgtggccgg cttgtcggcg ggctgcggcg ggcatttggg
     1381 cagggcggcc tgctcggcgg cgagccgcag cgtccagttc atgatctcga cgcccagccc
     1441 cggaatggtg cggccgaagg tcgtggcgta gccctcctca tagagcgtca ccagcttgtc
     1501 gcgcgaggcc cggtcgaacg ggccggccgg caggctgacg gtgatctcat ggccctggcc
     1561 acgataacgc atgtcggccg tgcgggtttc gacgagcttg gcgtcgggcg cgcccgcctt
     1621 gaccacggcc tcggcctcgg cgcgcatctc ggcgaacagg gcgttgacgt aggccggatc
     1681 gaacttgtcg tcgtcgagct gcacgtagcg gctgcgcacg acctcgtagg cgaccggcgc
     1741 catcaggaag ccgaccgccg agccgacgcc cgcgccgctc ggcaccatga tgcggttgat
     1801 gccgagcttt tcggccagcc gcgcggcatg gatgggcgcc gcgccgccga aggcgatcat
     1861 ggtgcgcccc tgcagctcct tgccgcgctc cacggcgtgc acgcgcgcgg cattggccat
     1921 gttctcctcg acgatttcgc tcacgccaaa cgccgcatcg cggcgcttca ggccaagcgg
     1981 cgtgccgacc gcctggtcga cggccacacc cgccttgtcg ggcgagagtt ttatggtgcc
     2041 gccggcgaag tagccgggat cgatgcggcc cagcacgaca tcggcatcgg tcacggtggg
     2101 ttccgtgccg ccgcggccgt agctcgccgg gccgggctcg gcaccggcac tttccggtcc
     2161 gacatggact cgcgacagcg aatcgaccga ggcgatcgag ccgccgccgg cgccgatctc
     2221 caccatctcg atcaccggga tgcgcaaggg caggccgctg cccttcagga agcggtactg
     2281 ccgcgccacc tcgaaggtgc gcgaatgctg cggctcgccg tgatcgatca ggcagatctt
     2341 ggccgtcgtg ccgcccatgt cgaagctcag caccttgtcg agaccgcact gccgcgccag
     2401 cgccgccgcc aggatggcgc cgccggccgg gcccgattcg accaggcgga tcgggaactt
     2461 gcgcgccgtc tccagcgccg ccagcccgcc gcccgaggtg atcatgaaca gcgggcagac
     2521 aaaacccttg gcgcgcagcg catcgtcgag ccggccgagg tagcgggcca tcaccggctg
     2581 gacataggcg ttggccaccg cggtcgacca gcgttcgtat tcgcggatct cgggcgagac
     2641 ttcgctggac agcgtgatcg acacgccggg cagcgtcttc gccaggatgt cgcgggtgcg
     2701 ccgctcgtgc ttgccgtcga gataggcgtg catgtagccg atggcgatcg cctcgacccc
     2761 ggcggccttg agcttgggcg ccaaggcgcg caccgccgcc tcgtcgagcg ggatcagcac
     2821 gttgccgcgg ccgtccatgc gctcgggaat gccgaagcgc aggtcgcgcg gcaccagcgg
     2881 cggcggcttc tgcatgaaga tgtcgtactg ctcgaagcgg tgctcgaagg cgatctcgat
     2941 cgaatcacgg aaaccctcgg tgacgaccag cgccgtcctg gcgcccttgc gctcgatgat
     3001 ggcgttggtg gcgagcgtcg tgccgtggat gaccaagccc agctcggcgg gcttgatcct
     3061 ggtctgcttg aggatctctt ccatgccggt cagcacgcct tcctcgggcg cgcgcgacgt
     3121 ggtcagcacc ttgacgctgg tgagcttgcc gttccattcg aggcagagat cggtgaaggt
     3181 cccgccgata tcgactgcca aacgccctct atcattcact cttacgtcca tttgctatgc
     3241 cgccgtctgc tggatgttgc cgccgagata ggcctggcgg atgcgcggat cggtgcgcac
     3301 ctcggccgcc gggccttcca tgaagagtcg tccctgttcc atcaccaggg cacggtcgga
     3361 aatcaagagc gccccgcgca cgttctgctc cacgataagg accgtgacgc cgcctgccgc
     3421 aatgcgctgc accgtcgcga acacatcgcc ctgcatccgg ggcgacaggc cgagcgaggg
     3481 ttcgtcgagc aacagcagcg tcggttcgac cagcagcacc atggccattt ccaggatctg
     3541 ctgctcgccg cccgagaggt tgccggcctc cgtccgtccc ttttgccgca gcatcgggaa
     3601 caggccgatg acgcggccga tcgccgcttg gtggctggcg gcgggcaagg tgtagcaccc
     3661 catcttgagg ttttcgtcga cgctcattgc cggaaaattg caacggcctt gcggcacgaa
     3721 gccgacgccg cgtttcaacc gttcccacgg cggcaggcgc tcgatggtct cgcccttgaa
     3781 cacgatctgg ccggcgaaca ggcgattggt gccgtagagg gcgcgcagca gggtcgattt
     3841 gccggcgccg ttgccgccga tcagggtggt gatcgtgccg gcctgcagat gggccgagaa
     3901 gtcgcgcacg atcggcacgt cgccgtagcc cgcggtgacg gacaccagtt cgagcgccgg
     3961 ctgggtcatg cggcgccccg catctcggcc tcggccattt ccggggtcat gccgagatac
     4021 gcttccagca cgcgcgaatc ggtatggatc tcggcggccg tgccttcggc gagcttcttg
     4081 ccctggtcga ggacgatgac gcgatgacag agattggtga tgaactcgac attgtgctcg
     4141 acgatcagga aggtctcgcc ggcctggttg agctgggcca acgccacctc gatctcgcgg
     4201 atgcggctgg gattgacgcc ggccaccggc tcgtcgagca gcacgatctt gggatgcggc
     4261 atcagcgccg cggccagcgc caccagcttc ttctggccgt acgacaggat gccgacctcg
     4321 gcctcgtagt agcgctgcag gccgatcagc tcgaccagct cgcgggcgcg cacctccgag
     4381 gcgtccacgg catcgcggta gcgcttggtg cgcaggaatt cgtcgatcca cgtggccgga
     4441 tcgaactgct ggtgggcgat ggcgagattg tcgctgaggc tcaggcgctc gtagacacgc
     4501 accgtctgga aggtgcgcat caggccggcg cgggcgatgt gatgggccgg ccggccggtg
     4561 atgtcggcgc ccgccagcac gaccttgccg gcgtcgagct tctggaagcc ggagaggcag
     4621 tcgatcgccg tgctcttgcc cgagccgttg ggtccgatca ggccggtcac gctgccggcc
     4681 tcgaccgcga acgacacgcc gtccagcgca tggacgccgg catatgactt gcgcaaggcc
     4741 acgacctcga gaaggacgct catcgcaacg cctcgcgcag gcggacgagc ttgcggtcgc
     4801 gcagccagcc ggcgatgccc gacggcatca cgaacatggc gatcaccagg atcaggccat
     4861 agatgatcat gcgcaggtcg gccgagaagc gcagcacctc gggcagggcg gagagcgcga
     4921 tgcccgacac gaccacgccc cagaagctgc cggcgccgcc gatgatcacg atgatcagga
     4981 aggtctgcat gtaatagaag tcgaggaaca gcggatcgat gatcctgagg taaaagcaat
     5041 agacgccgcc cgccgcgccg gtgatggcgg cgctcagggc gaaggacgcg agcttgtagg
     5101 gcatgggcgc gatgccttgg gcgcgcacca ggggttcgtt ctgcttgatg gcgatcaagg
     5161 tgcggccgat gcgcgagctg cacagcgcat agaggaaagc cagcatcgcc acggcgaaag
     5221 cccaggcgat ccagtagaat tgccgcgtcg ttgcgaactc gtagccccac gccgtgggcg
     5281 gcggcaggtt gggaatgccg agcggtccgc gcgtcaggtc gacccagtcg cgggcgatca
     5341 gggtcaccag caaggcgaag gtgagcgtga cgatgacgaa agcatgccgg ttggtgcgca
     5401 gggtcgggaa gccgacgacc agtgcgagga cggcgttgag cagggcggcc cacacgagac
     5461 ccaaccagaa gctgccgccg aaagtcacga cggtgagcgc cgtggcatag ccgccgatgc
     5521 cccagaagcc gagctgggcg aacgacagca ggccggtgaa gccgtagatc aggttgagcg
     5581 ccgccgcggc gacggtgaag accagtgccg agacgccgat gccgatgatg tagttcgacg
     5641 aggtgaggag cggcagcgcg gcaagggcga gggcggcgat cagggcgacg gcaagcttca
     5701 tccgacccgc atgcctccgc gcttgaacaa gccgtcgggg cgcacgaaca gcaccacgat
     5761 catgatcacg aacaccgcgg cttcctgcca ggcgatctcg aagaagccgc cgatccagct
     5821 ctcgaccagc cccagcgcga cggccgccac gatggcgccg gggatattgc ccagcccgcc
     5881 gatgatgacc agggcgaagg ccttgaagag caggaactgg cccatgtacg gcgtgacgag
     5941 ctggaggggc gagatcgccg cacccgcgag tccacagagt cccgcggcga ggaccacggc
     6001 gttgcgcgcc acgaccagcg ggcggatgcc gaccatgagg gctgcctcgc ggttctgggc
     6061 gatcgcccgc atcgcccggc cgaattggct atgacgcagc acggtgtaga ggccagcgaa
     6121 ggcggccagc gccgcacccg cgccgatcac ccgcgtccag gtgatgcgga tcgagccgat
     6181 ctcgacccct tcgaagccat actgcgtgtc gaccagccgc ggcgtggcgg tgaagacgta
     6241 ctgcatcaca tggatgagga tgatcgacag cccgagcgtg accaggatgc tgcgttcg
//
LOCUS       DASWGA010000779         8015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2115872, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000779 DASWGA010000000
VERSION     DASWGA010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8015
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2115872"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1800)
                     /gene="treS"
                     /locus_tag="VF991_18165"
     CDS             complement(<1..1800)
                     /gene="treS"
                     /locus_tag="VF991_18165"
                     /EC_number="5.4.99.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047471 - maltose
                     alpha-D-glucosyltransferase activity [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose alpha-D-glucosyltransferase"
                     /protein_id="HEX9558423.1"
                     /translation="MNAPLNAPLAPPQLPVAQDALWYKDAIIYQLHVKSFFDSDNDGI
                     GDFPGLISKLDYIAELGVNAIWLLPFYPSPRLDDGYDIAEYTGVHPEYGTLDDVKRFI
                     EEAHRRGIRVITELVINHTSDQHPWFQRARQAPPGSRERDFYVWSDNDQKYSGTRVIF
                     LDTQRSNWTWDPAANAYYWHRFYAHQPDLNFDNPDVLDAVLGVMRFWLDLGVDGLRLD
                     AVPYLVEREGTNNENLPETHGVLKRIRAEIDASFPGRMLLAEANQWPEDTKEYFGQGD
                     ECHMAFHFPLMPRMYMALAREDRFPITDIMRQTPQIPDNCQWAIFLRNHDELTLEMVT
                     DSERDYLWQTYATDRRARLNLGIRRRLAPLLERDRRRIELMNCLLFSMPGAPVIYYGD
                     ELGMGDNIRLGDRDGVRTPMQWSPDRNGGFSRADPAALALPVIMDPLYGYETINAEAE
                     ARDAHSLLHWMRRMLAVRRQHAAFGRGTLRFLYPKNRKVLAYLRELNDEAILCVANVS
                     RAPQAVELDLSEFTGRVPIELNGGSLFPPIGQLNYLLTLPSFGFYWFILAQESEAPSW
                     HTPAPEPMPDYVTVVLRNRLDEALRSAAPLLERE"
     gene            complement(1797..4901)
                     /locus_tag="VF991_18170"
     CDS             complement(1797..4901)
                     /locus_tag="VF991_18170"
                     /inference="COORDINATES: protein motif:HMM:NF023324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltotransferase domain-containing protein"
                     /protein_id="HEX9558424.1"
                     /translation="MQAPRIYYVHHGRSGVPVDWRRQIGRAADLGFDHVCAGPIFAAG
                     RDPFLIADLQASDPKLGMAGSSEDAVGELAALCAAERLPLFLDIVLDRLAADGASARA
                     ANGLYEWRDHGDVVDPRHDPGFAHAATVRPDAGERLAVWWAEHLARLVRAGAAGFRLV
                     GLDLLSNDALRGIVAATRGRTACALWAWTPGLSWSRHAGLAGLGLDGVFASTPWWDGR
                     AAWYVEEHESLRRIAPVIGPAEAPLRIPPVDIDLRRRMLRLAATTAGGLMMPAGFEDE
                     IEADVRQATREVGCLAKLSIMGEMRRLTGSSATVTVLARLDAADGLAAQRGVAVLINN
                     DLGQPKPLPVSLDPLDPAAAALLGAPRMLEGGARADHLAPGEISVALLSRIGAVREGK
                     RQDRRAASAAAALSPVVIDNVTPQVSGGPFAVKRIIGRPITVEAEVYADGHDMLAAEL
                     LWRAADDKDWQRVPLLPIANDRWRGTMMPKRIGRHLFAIEAWRDEYATLCHALDVKHR
                     AGIDVAPEIAEAKAHLGRLGLDQVVAALPGGDPGADVALLTASETRRLVAAADERAFA
                     CRHAAIAVDVERPQAEFASWYELFPRSLGTFDDVIEALPRIRDMGFDVLYFPPIHPIG
                     TTNRKGRNNALKAGPDDPGSPYAIGGVEGGFDAIHPALGTPQDFRRLVVAAAEHGLEI
                     ALDFAIQCSLDHPWLKEHPQWFRHRADGSIRYAENPPKKYEDIVNVDFYAKGVVPDLW
                     LALRDVVLHWIGEGVHIFRVDNPHTKPLPFWEWMIADIRGRHAETIFLAEAFTRPTMM
                     YRLAKVGFSQSYTYFTWRNTKAELTDYLRELTTTEVIDYFRPNFFVNTPDINPYFLQT
                     SGRAGFLIRAVLASTLSGLWGLYSGFELCEAAALPGREEYLDSEKYEIRRRDFSAPGN
                     IVAEISTLNRLRKSHPALHSHLGLAFYNAFNDQVMVYGKMTSAREDMVLVAVSLDPHG
                     VQEAAFEVPLWEWNLPDDGAVEVEDLMRGHRFVWQGKIQRLRLDPADLPFAIWRIAPA
                     GARP"
     gene            complement(5163..6104)
                     /locus_tag="VF991_18175"
     CDS             complement(5163..6104)
                     /locus_tag="VF991_18175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX9558425.1"
                     /translation="MHTHANHTIHRDHIHHGWNNAFPPRLRIAPGETVEFETKDASSG
                     QLTKTSTAEALKKLDLAYVNPVTGPVYVDGAKPGDALKVTVLSLHPSGWGWTGNIPGF
                     GLLADQFPEAHLHHWNYDPGLKPAMYGPGGRVPLRPFPGTIGVAPAAPGLHSIVPPRN
                     VGGNMDVRDITAGVELYLPIEVDGALFSVGDTHAAQGDGEVCGTAIESPIDVALKFDL
                     IKGAHLKMPRYVTPGPVSDHFDKQGYEVTTGIGPDLMTGARTAVMEMIELLAKRFGYS
                     PIDAYMLCSVCADLRISSIVDVPNWVVSFYFPRIVLE"
     gene            complement(6216..6971)
                     /locus_tag="VF991_18180"
     CDS             complement(6216..6971)
                     /locus_tag="VF991_18180"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9558426.1"
                     /translation="MDLGLKGKRAVVTGGSKGIGRAIAEGFANEGASVAICARNADDV
                     ASAVAALKAKGVKAFGKALDVADGAALKDWIAASAAELGGIDALVCNVSALAVGDSAE
                     TWEKSFRTDMMHTVNAIGAAVPFLEKSSSPSIALISSVSGFEVDFAAGSYGAIKAALI
                     HYAKGLSRQLVGKGIRVNCVSPGNTYFDGGIWQNIEKNLPDLFASTLKVNPTGKFGTP
                     AEVANGVVFLSSPMASRISGTNLVIDGALTVAV"
     gene            complement(6984..>8015)
                     /locus_tag="VF991_18185"
     CDS             complement(6984..>8015)
                     /locus_tag="VF991_18185"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEX9558427.1"
                     /translation="LPELVSAGMTRPLTLLLSAHALKTWGTRIEAAVPPNSLAFRTAE
                     QALAADVPCQADIAFMTREVTGKSSKDNPTPELKGFETVLRKSPGLKWLQIHPAGAER
                     PIYRELRDRGVKVTTASGATAVTVAHSTLGALIALNRRFPLLADAQRRHAWEPRLGER
                     APRDLKGQCAVIVGLGPIGRNIAAHLKMLGMTVVGAHRSAEPVEPCDRTIAYDHLLEA
                     LPEADWLILCCPASPTTRGIASAAAFKVMPPGGHFINVARGEIAVESDVITALQSGRL
                     AGAYLDVFEREPLDAASPLWDMPNVLVSPHTASHSLGQNEAIFDIFLDNLARWRGGAK
                     LRNDVDDLA"
BASE COUNT         1376 a         2556 c         2786 g         1297 t
ORIGIN      
        1 ctcgcgctcg agaagcggcg ccgccgatct cagcgcctcg tcgaggcggt tgcgcagcac
       61 gacggtgacg taatccggca tcggctcggg cgccggcgtg tgccacgacg gcgcttcgct
      121 ctcctgcgcc aggatgaacc agtagaagcc gaaggacggc aaggtgagca ggtagttgag
      181 ctggccgatg ggcgggaaca gcgacccgcc gttcagctcg atcggcacgc ggccggtgaa
      241 ttcggagaga tcgagttcga ccgcctgcgg cgcgcgcgag acgttggcca cacagaggat
      301 cgcctcgtcg ttcagttcgc gcagataggc cagcaccttg cggttcttcg gatagagaaa
      361 gcgcagcgtg ccgcgcccga aagcggcgtg ctggcgccgc accgcgagca tgcggcgcat
      421 ccaatgcagc agcgaatggg cgtcgcgcgc ttccgcttcg gcgttgatcg tctcgtagcc
      481 gtagagcgga tccatgatca cgggcaaggc cagcgccgct gggtcggccc gcgagaagcc
      541 gccgttgcga tcgggcgacc attgcatggg cgtgcgcacg ccgtcgcggt cgcccagccg
      601 gatattgtcg cccatgccga gctcgtcgcc atagtagatg accggcgcgc cgggcatcga
      661 aaacaacagg cagttcatca gctcgatgcg gcgccggtcc cgttccaaaa gcggcgccag
      721 gcggcgacgg atgccgagat tgaggcgggc gcgccggtcg gtggcgtagg tctgccagag
      781 atagtcgcgc tccgaatcgg tcaccatctc gagagtgagc tcgtcgtgat tgcgcaggaa
      841 gatcgcccat tggcagttgt cggggatctg cggcgtctgg cgcatgatgt cggtgatcgg
      901 gaagcgatcc tcgcgggcca gcgccatgta catgcgcggc atcagcggga aatggaacgc
      961 catgtggcat tcgtcgccct ggccgaaata ttccttggtg tcctccggcc attgattggc
     1021 ttcggccaac agcatgcggc cggggaacga ggcatcgatc tcggcgcgga tgcgcttcag
     1081 caccccgtgg gtttccggca ggttctcgtt gttggtgccc tcgcgctcga cgagataggg
     1141 cacggcatcg agccgcagcc cgtcgacgcc caggtcgagc cagaagcgca tgacgcccag
     1201 caccgcgtcg aggacgtcgg gattatcgaa attgagatcc ggctggtggg cgtagaagcg
     1261 atgccaataa taggcgttgg ctgccggatc ccaggtccag ttcgagcgct gggtgtcgag
     1321 gaagatgacg cgtgtgccgc tgtacttctg gtcgttgtcc gaccagacat agaagtcgcg
     1381 ctcgcgcgat cccggcggcg cctggcgggc gcgctggaac cacggatgct ggtcggaggt
     1441 gtgattgatc accagctcgg tgatgacgcg gatgccgcgc cgatgcgcct cctcgatgaa
     1501 gcgcttgacg tcgtcgagcg tgccgtactc gggatggaca ccggtgtact cggcgatgtc
     1561 gtagccgtcg tcgaggcgcg gcgagggata aaagggcagc agccagatcg cgttgacgcc
     1621 gagttcggcg atgtagtcga gcttggagat caggccggga aaatcgccga tgccgtcatt
     1681 gtcggaatcg aagaacgact tcacatgcag ctgatagatg atggcgtcct tgtaccacag
     1741 cgcgtcctgc gcgacgggca gctggggagg ggccaacggg gcattgaggg gggcgttcat
     1801 ggtcttgctc ccgccggcgc gatgcgccag atcgcaaagg gaaggtcggc cggatcgagc
     1861 cgcaggcgct ggatcttgcc ctgccacacg aaccgatgcc cacgcatcag atcctcgact
     1921 tcgaccgcgc cgtcatcggg caggttccat tcccacagcg gcacctcgaa ggcggcttcc
     1981 tgcacgccgt gcggatcgag gctgacggcc accagcacca tgtcctcgcg ggcggacgtc
     2041 atcttgccgt agaccatcac ctggtcgttg aaggcgttgt agaaggcgag gccgagatgg
     2101 ctgtgcagcg ccggatggga tttgcgcagc cggttgaggg tggaaatctc ggcgacgatg
     2161 ttgccgggcg cgctgaaatc ccggcgccgg atctcatact tctcggaatc gagatattcc
     2221 tcgcggccgg gaagggcggc ggcctcgcag agctcgaaac ccgaatagag gccccacagg
     2281 cccgacaagg tggaagcgag cacggcgcgg atgaggaagc cggcgcgtcc cgacgtctgg
     2341 aggaagtagg gattgatatc gggcgtgttg acgaagaagt tcgggcggaa atagtcgatg
     2401 acttcggtcg tggtgagctc gcgcagatag tcggtgagct cggccttggt gttgcgccac
     2461 gtgaagtagg tataggactg cgagaagccg accttggcca accgatacat catcgtcggc
     2521 cgcgtaaaag cctcggccag gaagatcgtc tcggcatggc ggccgcggat gtcggcgatc
     2581 atccattccc agaacggcag cggcttggtg tgcggattgt cgacccggaa gatgtgcacg
     2641 ccctcgccga tccagtgcag gaccacgtcg cgcagcgcca gccaaaggtc cggcacgacg
     2701 cccttggcat aaaagtcgac attgacgatg tcctcatact tcttgggcgg gttctcggca
     2761 tagcggatcg agccgtcggc gcggtggcgg aaccactgcg gatgctcctt gagccagggg
     2821 tggtcgagcg agcactggat ggcgaaatcg agcgcgatct ccaggccgtg ttcggcggcg
     2881 gcaacgacca gccggcggaa atcctgcggc gtgccgagcg ccggatggat cgcatcgaat
     2941 ccgccctcga cgccgccgat ggcatagggg ctgcccggat cgtcgggccc ggccttcaac
     3001 gcattgttgc ggcccttgcg gttggtggtg ccgatgggat ggatcggcgg gaaatagagg
     3061 acgtcaaagc ccatgtcgcg aatccgcggc aaggcctcga tgacgtcatc gaacgtgccc
     3121 aaagagcgcg ggaagagctc gtaccagctc gcgaactcgg cctgcggccg ctcgacgtcc
     3181 accgcgatgg ccgcgtggcg gcaggcaaag gcgcgttcgt ccgccgcggc gacgaggcgc
     3241 cgggtttcgc ttgctgtcag cagcgccaca tcagcgccgg gatcgccacc gggcagcgcg
     3301 gccacgacct gatcgagtcc cagccggccg aggtgcgcct tggcctcggc gatctcgggc
     3361 gcgacatcga tgccggcgcg gtgcttgacg tccagcgcat gacaaagcgt ggcgtattcg
     3421 tcgcgccacg cttcgatcgc gaacagatgc cggccgatgc gtttgggcat catcgtgccg
     3481 cgccagcgat cgttggcgat cggcaaaaga ggcacgcgct gccaatcctt gtcgtcggcc
     3541 gcccgccaca gcagctcggc cgccagcatg tcgtggccat cggcatagac ctcggcttcg
     3601 accgtgatcg gccggccgat gatgcgcttg accgcgaacg gcccgccgct cacctgcggc
     3661 gtcacgttat cgatgacgac aggcgagagc gctgcggccg cgctggccgc gcgccggtcc
     3721 tgccgcttgc cctcgcgcac ggcgccgatg cggctcaaga gcgccacgct tatttcacca
     3781 ggcgccagat ggtcggcacg cgccccgccc tccagcatcc gcggcgctcc gagcaacgcc
     3841 gcggcggccg gatcgagagg atcgaggctg acgggaagcg gcttcggctg gccgagatcg
     3901 ttgttgatca gcacggcgac gccgcgttgt gcggccagac catcggcggc atcgagccgc
     3961 gccaacaccg tcaccgtggc cgacgagccg gtcaggcggc gcatttcgcc catgatcgac
     4021 agctttgcca ggcatccgac ctcgcgcgtc gcttgccgga cgtccgcctc gatttcgtcc
     4081 tcgaagccgg ccggcatcat cagtccgccg gcggtggttg ccgccagcct gagcatgcgt
     4141 cgtcgcaagt cgatgtcaac cggagggatg cgcaaaggcg cctcggccgg gccgatgacc
     4201 ggggcgatgc gccgcagcga ttcgtgctcc tcgacgtacc acgcggcccg cccatcccac
     4261 cacggggtcg aggcgaagac gccgtcgagg ccgaggccgg ccaggccggc gtggcgcgac
     4321 cagctgagcc ccggagtcca agcccacaag gcgcatgccg tccggccgcg agtcgccgcg
     4381 acgatcccgc gcaaggcgtc gttcgacaac aggtccagtc cgaccagccg aaagccggcg
     4441 gcccctgccc gtaccaggcg cgccagatgc tcggcccacc agacggcgag gcgctcgccg
     4501 gcgtccgggc gcaccgtcgc cgcatgggcg aaccccggat cgtggcgagg atcgacaacg
     4561 tcgccgtgat cgcgccattc gtagaggcca ttggccgcgc gggcgctggc gccgtccgcc
     4621 gccaagcggt cgagcacgat atcgaggaac agaggcaagc gctcggcggc gcacagcgcg
     4681 gcaagttcgc ccaccgcgtc ttcggacgat ccagccatgc ccagcttcgg atcgctcgcc
     4741 tggaggtcgg caatcaggaa aggatcgcgt ccggcagcga aaatcggccc ggcgcagaca
     4801 tgatcgaagc cgaggtcggc ggcgcggccg atctgccggc gccaatccac cgggacgccc
     4861 gaacgaccat gatgaacgta gtagatccgg ggtgcttgca cccacgcctc ccccaccgcg
     4921 gcgaccgctt ccgcgggttt cgtgcacctg cccatgacac tgcaaccatt ggcgagcccg
     4981 gaggttgcac ttcattgggc ctgaatgttc cgccggcaac atcgccgagg gtcgtttgtg
     5041 aacgaggcaa gcagccagca tgacaggcga caaaagcgcg agcttcgacc ccgccagact
     5101 gttcgttgcc ggtcagaagg tgtcagatac gacgatcacc tgcaaggtgg cgcgccactg
     5161 cgtcactcca gcacgatccg cggaaagtag aacgacacga cccagttcgg cacgtcgacg
     5221 atcgagctga tgcgcaggtc ggcgcagacg ctgcacagca tataagcgtc gatcggcgaa
     5281 tagccgaagc gcttggccag aagctcgatc atttccatca ccgcggtgcg cgcgccggtc
     5341 atcaggtcgg ggccgatgcc ggtggtgacc tcgtagccct gcttgtcgaa atggtcgctc
     5401 accgggcccg gcgtgacgta gcgcggcatc ttgagatggg cgccctttat gaggtcgaac
     5461 ttcaacgcca cgtcgatcgg gctttcgatc gccgtgccgc agacttcgcc gtcgccttgc
     5521 gcggcatggg tgtcgccgac cgagaacagc gcgccgtcga cttcgatcgg caggtagagc
     5581 tcgacgccgg cggtgatgtc gcgcacgtcc atgttgccgc cgacattacg cggcgggacg
     5641 atgctgtgca ggccgggcgc ggccggcgcc acgccgatcg tgccggggaa gggccgcaac
     5701 ggcacccggc cgcccggccc gtacatcgcg ggcttgaggc cggggtcgta gttccagtga
     5761 tgcaggtgcg cctcggggaa ctggtcggcg agcaggccga agcccggaat gttgccggtc
     5821 cagccccagc ccgacggatg gagcgacaaa acggtgacct tgagcgcatc gcccggcttg
     5881 gcgccgtcga catagaccgg gccggtcaca ggattgacat aggcgaggtc gagcttcttc
     5941 agcgcttccg ccgtcgaggt cttggtgagc tggccggagg acgcgtcctt ggtctcgaat
     6001 tccacggtct cgcccggcgc gatcctgagc ctcggcggga aggcgttgtt ccagccgtga
     6061 tggatgtgat cgcgatggat cgtgtggttg gcgtgcgtgt gcatgggagt ctcctagcat
     6121 cggactaaat catgtcgtcc tgagcgtaag cgaaggacct catcgccgct tgccaagggc
     6181 acgagatcct tcgctgcgct caggatgaca cggggctaca cggcgacggt gagcgcgcca
     6241 tcgatcacga ggttggtgcc ggagatgcgg ctggccatcg ggctcgagag gaagaccacg
     6301 ccgttggcga cttccgcagg cgtaccgaac ttgccggtcg gattgacctt cagcgtcgag
     6361 gcgaacaggt ccggcaggtt tttctcgatg ttctgccaga tgccgccgtc gaaataggtg
     6421 ttgccgggcg acacgcagtt gacgcggatg cccttgccga cgagctgccg gctcaagcct
     6481 ttggcgtagt ggatcagcgc cgccttgatg gcgccgtagg agccggcggc gaagtcgacc
     6541 tcgaagcccg acacgctgga gatcagcgcg atcgacggcg aggaggactt ctcgagaaac
     6601 ggcacggccg cgccgatggc gttcaccgta tgcatcatgt cggtacggaa ggatttttcc
     6661 caggtttcag ccgagtcgcc gaccgcgagg gcgctgacat tgcacaccag cgcgtcgatg
     6721 ccgccgagct ccgccgcact cgcggcgatc cagtccttga gcgcagcgcc gtcggcgaca
     6781 tcgagcgcct tgccgaaggc ttttacgccc tttgccttga gcgcggcgac cgccgacgcc
     6841 acgtcgtcgg cattgcgcgc gcagatcgcg acactggcgc cttcattggc aaagccttcg
     6901 gcaatggccc ggccgatccc cttgctgccg ccggtgacaa cggcgcgctt gcccttcaat
     6961 ccaaggtcca tgtcaggccc cctttatgcg agatcgtcga catcattgcg cagcttggcg
     7021 ccaccgcgcc agcgcgcgag gttgtcgagg aagatatcga agatcgcctc gttctgcccc
     7081 agcgaatggc tggcggtgtg cggcgagacg aggacgttgg gcatgtccca cagcggcgag
     7141 gcggcatcga gtggctcgcg ctcgaagacg tcgagatagg cgccggcgag acggccgctt
     7201 tggagggccg tgataacgtc gctctcgacc gcgatttcgc cgcgcgcgac gttgatgaag
     7261 tggccgcccg gcggcatgac cttgaaggcc gccgcgctgg caatgccgcg cgtcgtgggc
     7321 gaggccgggc agcacaggat aagccagtcg gcctcgggca gcgcttccag caaatggtca
     7381 taggcgatgg tgcggtcgca gggttcgacc ggctcggcgc tgcgatgggc gccgacgacc
     7441 gtcatgccca gcatcttcag atgcgcggca atgttgcggc cgatcggacc caagccgacg
     7501 atcaccgcgc attgaccctt tagatcgcgc ggcgcgcgct cgcccaggcg cggctcccag
     7561 gcatggcggc gctgggcatc ggccagcagc gggaagcgcc ggttgagcgc aatgagggcg
     7621 cccagcgtgc tgtgcgccac cgtcaccgcc gtggcgcccg acgccgtcgt gaccttgacg
     7681 ccgcgatcgc gcagctcgcg atagatcggc cgttcggcgc cggccggatg aatctgcagc
     7741 catttgaggc cgggcgactt gcgcagcacc gtctcgaagc ccttgagctc cggcgtcgga
     7801 ttgtccttgc tcgacttgcc ggtgacctca cgggtcatga aggcgatgtc ggcttggcac
     7861 ggcacatcgg cggccagcgc ctgttcggcg gtgcgaaagg cgaggctgtt cggtggaaca
     7921 gcggcctcaa tgcgggtacc ccacgtcttc agggcgtggg cggagagcag cagggtgagc
     7981 gggcgagtca tgcccgccga gactagctca ggcag
//
LOCUS       DASWGA010000780         2225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1232557, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000780 DASWGA010000000
VERSION     DASWGA010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1232557"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..995)
                     /locus_tag="VF991_18190"
     CDS             complement(<1..995)
                     /locus_tag="VF991_18190"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache and HAMP domain-containing protein"
                     /protein_id="HEX9558428.1"
                     /translation="MKRGLFLKYVVLFVGLVTGVLVINAALDLYFVYQDNRRASIEVQ
                     KEKAEAAAQRIESFVRNIENQIGWVAQAQWAALPVEQRRFDDVRLLRQVPAITELVQL
                     DRQGREQLRVSRLSMDVVGAGTDRSAEPAFVEAIANRVYFGPVYFRKESEPYLTMAVA
                     HGGKSGVTIAEVNLKLIWDVVSQIKVGKEGYAYVVDRLGRLVAHPDISLVLRGTDMSR
                     LAQVAAALKPQGQDGGPVDARNRAGVSVLSAHAAIPALGWLVFVEVPTSEAQQPVIDA
                     GLRALGLLVLGLLIAGGAGALLARRMVVPIRTLQTGAERIGGGELGHRLAIKTGD"
     gene            complement(1288..>2225)
                     /locus_tag="VF991_18195"
     CDS             complement(1288..>2225)
                     /locus_tag="VF991_18195"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX9558429.1"
                     /translation="RADLHRVLLETVRRRLGGDALQLDRRCIRVDQDGAGVVIHFDNA
                     EPQQGKLAVGCDGIHSALRRQLVANEGPPKYSGVNMWRGAVRWPAYLGGDTMVSTGWM
                     TVGKTVIYPIRPGTPETAGMPLINWVAEIEQAEAVRQDWTGRGRLSDMMPAFAGLKFD
                     WLDISGMIESTEEILEYPMVDRDPLPRWSFGRLTLLGDAAHPMYPRGSNGAGQAILDA
                     RFLTGQIRKLGATPEALQHYEAVRGPATAKVVLTNRSDPPDAILREVWQRSGGKRFER
                     IEDVISTAELEAISERYKKVAGFDRESLKARPSFV"
BASE COUNT          366 a          776 c          732 g          351 t
ORIGIN      
        1 tcgtcgccgg tcttgatggc caggcgatgg ccaagctcgc cgccgccgat gcgctcggcg
       61 ccggtctgca gggtgcggat tggcaccacc atgcgccgcg ccagcagcgc gccggcgccg
      121 cccgcgatca gcaggccgag caccagcagg ccgagcgcgc gcagcccggc gtcgatgacc
      181 ggttgctggg cctcggaggt cggaacctcg acgaacacca gccagcccag cgccggaatg
      241 gcggcatgcg ccgacaggac cgacacgccg gcgcggttgc gggcatcgac tggcccgcca
      301 tcctggccct gcggtttcaa ggccgccgcc acctgggcga gccggctcat gtcggtgccg
      361 cgcagcacca gcgagatgtc gggatgggcc accaggcggc ctaggcggtc gacgacatag
      421 gcgtagcctt ccttgccgac cttgatctgc gagaccacgt cccagatcag cttgaggttg
      481 acctcggcaa tggtgacgcc gctcttgccg ccatgggcga ccgccatggt gaggtagggc
      541 tcgctctcct tgcggaaata gaccggcccg aaatagacgc gattggcgat tgcctcgacg
      601 aaggcgggct ccgccgagcg gtcggtgccg gcgcccacga cgtccatcga cagccgcgac
      661 acacggagct gctcacggcc ctggcggtcg agctgcacca gctcggtgat cgccggcacc
      721 tggcgcagca agcggacgtc gtcgaagcgc cgctgctcga ccggcagggc ggcccactgg
      781 gcctgcgcca cccaaccgat ctggttctcg atgttgcgca cgaaggattc gatgcgctgc
      841 gctgcggcct cggccttctc cttctggacc tcgatcgagg cgcgccggtt gtcctggtag
      901 acgaagtaga gatcgagggc ggcattgatg accagcacgc cggtcaccag cccgacgaac
      961 agcacgacgt attttaggaa cagcccgcgc ttcactcgat caccccgtca gccgccgcca
     1021 acagggtcgg cggcaccgcc gggcggagtt tacgcgacat gccgcgattg atcaccaagt
     1081 catcctccgt cggaaccgtc gaaatcaggg gtacgacggc ccggcgccgt cgccctccga
     1141 tctcctcgcg agatacatgc ggcgtgcgcg caatcagatg ctcgatgtca ggcccgtcca
     1201 atgcgcctcc gacgccgatt ttccggccgc gacaaggcta tggactggaa ccagtaggcg
     1261 caatcttttc caggcgcacg agacacccta gacgaagctt ggccgcgcct tcagcgactc
     1321 gcggtcgaag cccgccacct tcttgtagcg ttcggagatc gcttcgagct cggcggtcga
     1381 gatcacgtcc tcgatgcgct cgaagcgttt gccgcccgag cgctgccaga cctcgcgcag
     1441 gatggcgtcg ggcggatcgc tgcgattggt caacacgacc ttggccgtcg ccgggccacg
     1501 gactgcctcg tagtgctgca gcgcttcggg ggtcgcgcca agttttctga tctgtccggt
     1561 gaggaagcgc gcatcgagga tcgcctggcc cgcgccattg gagccgcgcg gatacatcgg
     1621 atgcgcggcg tcgcccagca gggtgagccg gccaaaactc cagcgcggca gcggatcgcg
     1681 atcgaccatg gggtattcca ggatctcctc ggtgctctcg atcatgccgc tgatgtcgag
     1741 ccagtcgaac ttcaggccgg cgaaggccgg catcatgtcc gacagccggc cgcggccggt
     1801 ccagtcctga cgcaccgcct cggcctgctc gatctcggcc acccagttga tcagcggcat
     1861 gccggccgtc tccggcgtgc ccggccggat gggatagatc accgtcttgc cgaccgtcat
     1921 ccagccggtc gagaccatgg tgtcgccgcc gagataggcc ggccagcgca ccgcaccgcg
     1981 ccacatgttg acgccggaat atttgggcgg gccctcgttg gcaacgagtt ggcggcgcaa
     2041 cgccgaatgg atgccgtcgc agcccaccgc gagcttgccc tgttgcggct ccgcattgtc
     2101 gaagtggatc acgacgcccg caccgtcctg atcgaccctg atgcagcgac gatcgagctg
     2161 aagggcatcg ccgcccaacc gtcgcctcac ggtctcgagc agcacccgat ggaggtcggc
     2221 gcgat
//
LOCUS       DASWGA010000781         2682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_853377, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000781 DASWGA010000000
VERSION     DASWGA010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853377"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1277
                     /locus_tag="VF991_18200"
     CDS             <1..1277
                     /locus_tag="VF991_18200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEX9558430.1"
                     /translation="SEWRIKFVRRMNEADTEANAKAIDSLLNYETVKYFGNEGHEARR
                     FDVSRRRYETAAIRSSRTLSLLNIGQGVIISAGLAAVMIMAGSGVVAHTMTLGDFVAV
                     NAFLIQLYMPLNMLGFAYREIRNSLVNMEKMFGLLEVEAEIADKPGAPRLVVSGGEIV
                     FDHVDFHYEKARPILHDVSFRVPPGDTVAIVGSSGAGKSTVSRILFRFYDVAGGSVRI
                     DGQDIRDVTQSSLRAAIGVVPQDTVLFNDSIYYNIAYGRPGASREEVEQAARLARIHD
                     FITALPDGYQATVGERGLKLSGGEKQRVAIARTILKNPHILLFDEATSALDTRTEQEI
                     QRSLEEVSRGRTTLVIAHRLSTIVNADEIVVLDHGRIVERGRHADLLERNGLYADMWR
                     RQQEAAEAERHVEREVEEPPSLRAEGHLRVAE"
     gene            1264..2427
                     /locus_tag="VF991_18205"
     CDS             1264..2427
                     /locus_tag="VF991_18205"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558431.1"
                     /translation="MSPNSPAESAASPWRPLLPVFAACGAIGLQVGVALPLVPLALER
                     QGADKLTIGVVAAAWAIGMLATASHIPRLAARFGAVPFIIAAVLAGSAITVAYTLTDS
                     VIAWFVLTFLHGVVGGVPWVVSEIWMNVVVEEKHRGRVMGVYAMLVAFGLALGPFVLQ
                     VVGVYGPAPFLTSAALALLVAVPLLPYWKTAPQIEHPADSGYTAVIVGAPLAMLAAFA
                     CGLGEQVAFSFLPVYAVGAGVSAQTGALWLSAFVIGNVILQWPIGCMADHFDRRAVLA
                     GCTLASAILVALLPAVSAQSPIIAGVIMLWGGLSFAIYPVGLALLGQRFGGGDIARAN
                     TAFSMLYILGGLVGRPLAGAAMDAVGDPGLGWTLALFYSIAAVAALLAFHRRG"
     gene            2443..>2682
                     /locus_tag="VF991_18210"
     CDS             2443..>2682
                     /locus_tag="VF991_18210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HEX9558432.1"
                     /translation="MSASAAKSGKAADPLLAPLLAGDRRALAQAITLIESTRSDHRER
                     ADALLAAVLPRAGKSVRLGITGVPGVGKSTFIERFG"
BASE COUNT          378 a          923 c          917 g          464 t
ORIGIN      
        1 tgtcggaatg gcgcatcaaa ttcgtgcgcc gcatgaacga ggccgacacc gaggccaacg
       61 ccaaggcgat cgatagcctg ttgaactacg agaccgtgaa atacttcggc aacgaggggc
      121 acgaggcgcg ccgtttcgac gtcagccggc gacgctacga gacggcggcg atccgctcca
      181 gccgcaccct gtcgctgctc aatatcggcc agggcgtcat catctccgcc gggctcgccg
      241 cggtgatgat catggcgggc tccggagtcg tggcgcacac catgaccctg ggcgacttcg
      301 tggcggtcaa cgccttcctg atccagctct acatgccgct caacatgctg ggcttcgcct
      361 atcgcgagat caggaattcg ctggtgaaca tggagaagat gttcggcctg ctcgaggtcg
      421 aggccgagat cgccgacaag ccgggcgcgc cgcggctcgt ggtgagcggc ggcgagatcg
      481 tgttcgacca tgtcgacttc cactacgaga aagcccgccc gatcctgcac gacgtgagct
      541 tccgcgtgcc gcccggcgac accgtggcca tcgtgggctc gagcggcgcc ggcaagtcga
      601 cggtctcgcg catcctgttc cgcttctacg acgtcgccgg cggcagcgtg cggatcgacg
      661 gccaggacat ccgcgacgtc acgcaatcga gcctgcgggc ggcgatcggc gtggtgccgc
      721 aggacaccgt gctgttcaac gattcgatct actacaacat cgcctacggc cggcccggcg
      781 ccagccgcga ggaggtcgag caggcggccc ggctggcccg catccacgac ttcatcacgg
      841 cgctgcccga cggctaccag gcgaccgtgg gcgagcgcgg cctgaaattg tcgggcggcg
      901 agaagcagcg ggtggcgatc gcccgcacga tcctgaagaa cccgcacatc ctgctgttcg
      961 acgaggcgac cagcgcgctc gacacgcgca ccgagcagga gatccagcgc tcgctggaag
     1021 aggtgagccg cggccgcacc acgctggtga tcgcccatcg cctgtcgacc atcgtcaacg
     1081 ccgacgagat cgtcgtgctc gaccacggcc gcattgtcga gcgtggccgc cacgcggacc
     1141 tgttggagcg caacggcctc tatgccgaca tgtggcgccg ccagcaggag gccgccgagg
     1201 ccgagcgcca cgtcgagcgc gaggtcgagg agccgccctc gttgcgcgcc gagggtcatc
     1261 tgcgtgtcgc cgaatagtcc agcggagagc gccgcaagtc cctggcgtcc gctgctgccc
     1321 gtcttcgctg cttgcggcgc gatcggcctg caggttggcg tcgcgttgcc gctggtgccg
     1381 ctggcgttgg aacggcaagg cgccgacaag ctcaccatcg gcgtcgtggc cgccgcctgg
     1441 gccatcggca tgctggccac cgcctcgcac attccccgac tggccgcgcg ctttggcgcg
     1501 gtgccgttca tcatcgctgc ggtcctcgcc ggctcggcga taaccgtcgc ctatacgctg
     1561 accgacagcg tcatcgcctg gttcgtgctg acattcctgc atggcgtcgt cggcggcgtg
     1621 ccgtgggtgg tgagcgagat ctggatgaac gtcgtcgtcg aggaaaagca ccgcggtcgc
     1681 gtcatgggcg tctatgccat gctggtggcg ttcggcctgg cgctgggccc tttcgtcctt
     1741 caggtcgtcg gcgtttacgg accggcgccg ttcctcacca gcgccgcact cgccttgctg
     1801 gtggcggtgc cgctgctgcc ctattggaag acggcgccgc agatcgagca cccggccgac
     1861 agtggctaca cggccgtcat cgtcggcgcg ccgctcgcca tgctggccgc gttcgcctgc
     1921 ggcctgggcg agcaggtcgc gttcagcttc ctgccggtct acgcggtcgg cgccggcgtt
     1981 tcggcgcaaa ccggtgcgct gtggctgtcg gccttcgtga tcggcaacgt gatcctgcaa
     2041 tggccgatcg gctgtatggc cgatcatttc gaccggcgcg ccgtcctggc cggctgcacg
     2101 ctggccagcg cgatcctggt ggcgctgctg ccggctgttt ccgcgcagtc gccgatcatc
     2161 gcgggcgtga tcatgctgtg gggcggcctg tcgtttgcga tctatcccgt cggcctggcg
     2221 ctgctcggcc agcgctttgg cggcggcgac atcgcccgcg ccaataccgc tttcagcatg
     2281 ctgtacattt tgggcggctt ggtcggccgg ccgctcgccg gcgcggcgat ggatgccgtc
     2341 ggcgatccag ggctcggttg gacgctggcg cttttctatt cgatcgccgc cgtcgccgcc
     2401 ttgctggcgt tccaccgacg cggctgataa gtctggcgcg gtatgagcgc gtcagccgca
     2461 aagtcaggca aagcagccga tccgctcctc gcgcccctgc tggccgggga ccgccgtgcg
     2521 ctggcgcagg ccatcaccct gatcgaatcg acgcgttccg atcaccgcga gcgcgccgac
     2581 gcactgctgg cggccgtgct gccgcgtgcc ggcaagtcgg tgcggctcgg catcaccggc
     2641 gtgccgggcg tcggcaagtc gaccttcatc gagcgcttcg gc
//
LOCUS       DASWGA010000782         2170 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_615194, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000782 DASWGA010000000
VERSION     DASWGA010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_615194"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1011)
                     /gene="mltG"
                     /locus_tag="VF991_18215"
     CDS             complement(<1..1011)
                     /gene="mltG"
                     /locus_tag="VF991_18215"
                     /inference="COORDINATES: protein motif:HMM:NF014656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEX9558433.1"
                     /translation="MLSYFRWVLFFIALFATVMGGALWLGNTMLGAPGPLEKTKTVVI
                     PRGAGPATMTKVLQDEGVVSHGKLFRLALMIDPAPKPIKAGEYEIPPHISMQALVDLL
                     QSGKVVQRRLTVPEGTTTAEVVELVRKTEALAGEITLDLKEGDLLPETYFYSRDDTRD
                     GLLSRMKEAMDKTLDEAWRKRAAGLPLANRREALVLASMIEKETAVPAERAKVAAVFV
                     NRLRRKMRLESDPTVIYGVTAGKGPFNRELSRADLQSTSPYNTYMVGGLPPAPICNPG
                     RASIVAATNPARDRLLYFVADGQGGHAFALTVAEHNRNVERWRQIQRERQEQQLQTPS
                     AAP"
     gene            complement(1029..>2170)
                     /gene="fabF"
                     /locus_tag="VF991_18220"
     CDS             complement(1029..>2170)
                     /gene="fabF"
                     /locus_tag="VF991_18220"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEX9558434.1"
                     /translation="DTSDLATKIAGEVPQGDKANGHFNVDAYMPAKDQRKLDKFLIFG
                     IAAAQQAVEDSGWKPQDDEGRNRTGVMIGAGIGGLQTIYETSLILKERGPRRVSPFFI
                     PSALINLASGQVSIKYGFKGPNHAVVTACATGAHALGDAARLIQWEDADVMVAGGAEA
                     AICRIGIAGFNACKALSTDFNDTPARASRPWDRRRDGFVMGEGAGCVVLEEYEHAKKR
                     GAKIYAEIVGYGLSGDAYHITAPSEDGGGAMRAMQAALKRAKLDVDQIDYVNAHGTST
                     MADVIELGAVKRTFGDSAYKLSMSSTKSATGHLLGAAGAIEAIYSIKSIIDQAVPPTL
                     NLDEPDEGCDIDLVAKQAKPRKVRYALSNSFGFGGTNACLIFGPV"
BASE COUNT          329 a          733 c          729 g          379 t
ORIGIN      
        1 cggggcggcc gacggcgtct gcagttgctg ctcctggcgc tcgcgctgga tctgccgcca
       61 gcgctcgaca ttgcggttgt gttcggcgac ggtgagcgca aaagcgtgac cgccctggcc
      121 atcggccacg aagtaaagca ggcggtcgcg cgccggattg gtcgccgcca cgatcgaagc
      181 gcgtcctgga ttgcagatcg gcgccggcgg caggccgccg accatgtagg tattataagg
      241 tgaggtcgat tgcaggtcgg cgcggctcag ctcgcggttg aacggccctt tgccggcggt
      301 cacgccgtag atcaccgtcg gatcgctctc gagcctcatc ttgcggcgca gccggttgac
      361 gaacaccgcc gccaccttgg cccgctcggc cggcaccgcc gtctccttct cgatcatcga
      421 ggccagcacc agggcctcgc ggcggttggc gagcggcagg ccggcggcgc gcttgcgcca
      481 cgcctcgtcg agcgtcttgt ccatcgcctc cttcatacgc gacagaagcc cgtcgcgcgt
      541 gtcgtcgcgc gagtagaaat aggtctcggg cagaagatcg ccttccttga ggtcgagcgt
      601 gatctcgccg gcgagcgcct cggtcttgcg caccagctcg accacctctg ccgtcgtggt
      661 gccctcggga acggtcaggc ggcgctgcac gaccttgccc gactgcagca gatcgaccag
      721 cgcctgcatc gagatgtgcg gcgggatctc gtactcgccc gccttgatcg gcttgggcgc
      781 gggatcgatc atcagggcga ggcggaacag cttgccgtgc gagacgacgc cctcgtcctg
      841 cagcaccttg gtcatggtgg cgggaccggc gccgcgcggg atcacgacgg tcttggtctt
      901 ttcgagcggt ccgggcgcgc cgagcatggt gttgccgagc cacagggcgc cgcccatcac
      961 cgtcgcgaac agcgcgatga agaacaggac ccaacggaaa tagctgagca cgcctcagcc
     1021 ccagccgatc agaccgggcc gaagatcaaa caggcgttgg tgccgccgaa gccgaacgaa
     1081 ttgctgagcg cgtagcggac cttgcgcggc ttggcctgct tggccaccag gtcgatatcg
     1141 cagccctcgt ccggctcgtc gagattgagc gtcggcggta cggcctggtc gatgatcgac
     1201 ttgatcgagt agatcgcctc gatcgcgccg gcggccccca gcagatggcc ggtcgccgac
     1261 ttggtcgacg acatcgaaag cttgtaggcg ctatcgccga aggtccgctt gacggcgccg
     1321 agctcgatca cgtcggccat ggtcgaggtg ccgtgcgcgt tgacataatc gatctggtcg
     1381 acgtcgagct tggcgcgctt cagcgcggcc tgcatggcgc gcatggcgcc gccgccgtcc
     1441 tccgacggcg cggtgatgtg gtaggcgtcg cccgacaggc catagcccac gatctcggca
     1501 tagatcttgg cgccgcgctt cttggcgtgc tcatactcct cgagcacgac gcagcctgcg
     1561 ccttcgccca tcacgaagcc gtcgcgcctc ctgtcccacg gccgcgaggc ccgggccggc
     1621 gtgtcgttga aatcggtcga caaggccttg caggcattga agccggcgat gccgatgcgg
     1681 cagatcgcgg cctcggcgcc gccggccacc atgacgtcgg catcctccca ctggatcagg
     1741 cgcgcggcat cgcccagcgc atgagccccc gtggcgcaag ccgtcaccac cgcatggttg
     1801 ggccccttga agccgtattt gatcgagacc tggccggagg cgaggttgat cagcgccgac
     1861 gggatgaaga acgggctgac ccgccgcggt ccccgctcct tcaggatcag cgacgtctcg
     1921 tagatggtct gcaagccgcc gatgccggcg ccgatcatca cgccggtgcg gttgcggcct
     1981 tcgtcgtcct gcggcttcca gcccgaatcc tcgaccgcct gctgggcggc ggcaatgccg
     2041 aagatcagga acttgtcgag cttgcgctgg tctttcgccg gcatgtaggc gtcgacgttg
     2101 aagtggccgt tcgccttgtc gccttgcggc acttcacccg cgatcttggt cgcaaggtcc
     2161 gacgtgtcga
//
LOCUS       DASWGA010000783         3808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_463234, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000783 DASWGA010000000
VERSION     DASWGA010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3808
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463234"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VF991_18225"
     CDS             <1..275
                     /locus_tag="VF991_18225"
                     /inference="COORDINATES: protein motif:HMM:NF025134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative 2OG-Fe(II) oxygenase"
                     /protein_id="HEX9558435.1"
                     /translation="GSQIIFQDPRGQASMIMPKPRQYTKLTANSANAQSKEGRLLIFP
                     AWLKHTVPANDGQSERISISFNLMFKNFSETMAAPLWDATAGKEKG"
     gene            complement(397..1350)
                     /locus_tag="VF991_18230"
     CDS             complement(397..1350)
                     /locus_tag="VF991_18230"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEX9558436.1"
                     /translation="MTTYLDFEKPIAELESKIAELRHLPNSGDVDVAEEVMRLQDRVH
                     KQLRATYAKLTPWQRVQVARHAERPHAQRYIDRLITDYMPLAGDRAFGEDAAVVGGVG
                     RLRGRSIVVLGQEKGDDTDSRIKHNFGMARPEGYRKAQRLMKLADRFGMPVLTLVDTS
                     GAYPGIDAEARGQAEAVATSIDTCLSLGVPLVSVVIGEGGSGGALAIASADRVYMLEN
                     SIYSVISPEGCASILWRDNANAQDAAEAMKVTAGDLKKLDVIDEVIPEPMGGAHRAPE
                     ETIDLVGKVVSEALGELSQFDAETLRRRRQEKFLAMGKKGL"
     gene            complement(1385..2326)
                     /locus_tag="VF991_18235"
     CDS             complement(1385..2326)
                     /locus_tag="VF991_18235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEX9558437.1"
                     /translation="MKKKPASPLSREAEAFIEMLSAERGASKNTEAAYRADLKNLEAF
                     LVRRKQRPVTADIAALRAYLKSLDYLGMTPRTVARRLSVIRQFFRFLLAERLREDDPA
                     STLDSPRLGRPLPKVLSRVEVDRLIEAAQAKGAEDGGRMETLLEILYGTGLRVSELVT
                     LPLAAADRDPAMLMVRGKGDKDRQVPLSDPARVAIAKWLHMRAAALAEGETSRYLFPS
                     RGRTGHLTRQRFAQLLKESALAAGIDPARVSPHVLRHAFASHLLEAGADLRSVQLMLG
                     HADIATTQIYTHIMPEKLRSLVEDSHPLARRRRKPAG"
     gene            complement(2334..>3808)
                     /locus_tag="VF991_18240"
     CDS             complement(2334..>3808)
                     /locus_tag="VF991_18240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558438.1"
                     /translation="LATTQVFAQAPNFDDKPTGFLTVQTGGMPADAWNGTSLGTAKQL
                     VSALPAAPRSRALRDLQFTVLVSALTPPAPDGSPPPSLFARKVEKLAAMGEGESLNEM
                     VRSAGGYLDPTSATTVANAMMMAGERQGACAIVRNWELTEPFARRADAACRLLAGESA
                     GAIPPSGQLDGPAIMMLDLSHAQPPTAALSSTQPPVIRALVGLKSLPIATRLDIAERG
                     EALAIVEATRLGDLYVEAVRDGAALPPAMARRAQLVAAARNAANPDEIINSIIAVYGE
                     ARGSPLFPTIARASAAGLLNLPAKPQFARVAQEAMRGFLLLGDKQQAKTWTKLALSTA
                     YNDPQAMTALDRLLPLAAVAGIDDPKRLPPVEVNRWYDVLRHDDPARAPLRGFLLLEL
                     FRATGIDVPPGSTELPDAPPANIRLVTPAAATLQALQAAAAGGRRAETSLLASIAAGE
                     TPLGELHPAGVAAIVRALRQVGEDHAARLFAIEVAIAYGL"
BASE COUNT          592 a         1273 c         1341 g          602 t
ORIGIN      
        1 cgggctcgca gatcatcttc caggatccgc gcgggcaggc ctcgatgatc atgcccaagc
       61 cccggcaata caccaagctc accgccaaca gcgccaacgc acagagcaag gaaggccgcc
      121 tgctgatctt cccggcctgg ctgaagcaca ccgtgccggc caatgacggc cagagcgagc
      181 gcatcagcat ctcgttcaac ctgatgttca agaatttcag cgagaccatg gccgccccgc
      241 tctgggacgc gacggcgggc aaggagaagg gctaggggaa cgcgggaaag gtccctcggc
      301 cttcggcctc gggatgacag ggtgcgtgga tgacgaaggg cctgtcatcc cgagcgaagc
      361 gggggacctt taaggcctcg cgatggcagc gggtgtctaa agccctttct tgcccatcgc
      421 caagaacttc tcctggcggc gccggcgcaa ggtctcggcg tcgaactgcg agagctcgcc
      481 cagcgcctcg gacacgacct tgccgacgag gtcgatggtt tcctcgggcg cgcgatgggc
      541 gccgcccatc ggctcgggga tcacctcgtc gatcacgtcg agcttcttga ggtcgcccgc
      601 cgtcaccttc atcgcctcgg cggcgtcctg cgcgttggcg ttgtcgcgcc acaggatcga
      661 ggcgcagccc tcgggcgaga tcaccgaata gatcgagttc tccagcatgt agacgcggtc
      721 ggccgaagcg atggcgagcg cgccgcccga gccgccctcg ccgatcacca cgctgaccag
      781 cggcacgcca agcgacaggc aggtatcgat cgaggtcgcc accgcctcgg cctggccgcg
      841 cgcctcggca tcgatgccgg gataggcgcc cgacgtgtcg accagggtca gcaccggcat
      901 gccgaagcgg tcggcgagct tcatcaggcg ttgcgccttg cggtagccct cgggtcgggc
      961 catgccgaaa ttgtgcttta tgcgcgagtc ggtgtcgtcg cctttctcct ggccaagcac
     1021 gacgatgctg cggccgcgca gccggccgac accgcccacc acggcggcgt cctcgccgaa
     1081 ggcgcggtcg ccggccagcg gcatatagtc ggtgatcagc cgatcgatgt agcgctgggc
     1141 gtgcggccgc tcggcatggc gggccacctg cacccgctgc cagggggtca gcttggcgta
     1201 ggtcgcgcgc agctgcttgt gcaccctgtc ctgcaggcgc atgacctcct cggcgacgtc
     1261 gacgtcgccc gagttcggca agtgcctgag ctcggcgatc ttgctttcga gctccgcgat
     1321 cggcttctcg aagtcgagat aggtggtcat tgaatttcag atgtcgcccg gtaccggaat
     1381 cctgtcaacc ggccggcttg cgccgccggc gggccagcgg atggctatcc tccacgagcg
     1441 atcgcaactt ttccggcatg atgtgagtgt aaatctgggt cgtggcaatg tcggcatgac
     1501 ccaacatgag ctgcacgctg cgcaaatcgg cgccggcttc cagcaaatga ctggcgaagg
     1561 cgtggcgcaa tacgtgcggc gagacgcgcg caggatcgat gccggcggcc agcgccgact
     1621 ctttcagaag ctgggcgaaa cgctgacgtg tgagatgccc ggttcggccg cgcgacggaa
     1681 agagatagcg cgaggtctct ccttcggcga gcgcggccgc acgcatgtgc agccacttcg
     1741 cgatcgcgac gcgcgccgga tcggagagtg gcacttgccg gtccttatcg cccttgccac
     1801 gcaccatcag catggccgga tcgcgatcag ccgcggccaa cggcagcgtc accagctccg
     1861 agacgcgcaa gcccgtgccg tagaggatct cgagcagggt ctccatgcgg ccgccatctt
     1921 cggcaccttt ggcctgtgcg gcttcgatca gtcggtcgac ttcgacgcgc gacaggacct
     1981 tgggcagcgg ccgtcccagg cgcggtgaat cgagcgtgct cgccggatcg tcctcgcgca
     2041 gccgctcggc cagcaggaag cggaagaact ggcggatcac cgacagccgg cgcgccaccg
     2101 tgcgcggcgt catgccgaga tagtcgagcg acttcaggta ggcgcgcagc gcggcgatat
     2161 cggccgtcac cggtcgctgc ttgcgccgca ccaggaaggc ctcgagattt ttcagatcgg
     2221 cgcgatatgc cgcttcggta ttcttggagg caccccgctc ggccgacagc atttcgatga
     2281 aggcttccgc ttcacgcgac aagggcgagg caggcttttt cttcacggtc cgctcagagg
     2341 ccgtaggcga tcgcgacctc gatcgcgaac aggcgcgcgg catggtcttc gccgacttgg
     2401 cgcagcgccc gcacgatcgc ggcgacgcca gccggatgga gctcgcccag cggcgtctca
     2461 ccggcggcga tcgaggccag cagcgaggtc tcggcgcgac ggccgcccgc cgcggcggct
     2521 tgcagcgcct gcagggtggc ggcggccggc gtgacgaggc ggatgttggc gggtggcgca
     2581 tcgggcaact cggtggagcc cggtggcacg tcgatgccgg tggcgcggaa cagttccagc
     2641 agcaggaagc cgcgcagcgg cgcgcgcgcc ggatcgtcgt ggcgcagcac gtcgtaccag
     2701 cggttgacct caaccggcgg caggcgcttg ggatcatcga tgccggccac cgccgccagc
     2761 ggcaacagcc ggtcgagcgc ggtcatggcc tgaggatcgt tgtaggcggt gctcagcgcg
     2821 agcttggtcc aggtcttggc ctgctgcttg tcgcccagca gcagaaagcc gcgcatcgcc
     2881 tcctgcgcca cccgggcgaa ttgcggctta gccggcaggt ttagaagtcc ggcggcgctg
     2941 gcgcgagcga tggtgggaaa caacgggctg ccgcgcgctt cgccgtagac ggcgatgatg
     3001 gaattgatga tttcgtcggg attggcggcg ttgcgcgccg ccgcgaccag ctgcgcgcgc
     3061 cgcgccatcg ctggcggcag cgccgccccg tcgcgcaccg cttcgacgta aagatcgccc
     3121 agtcgggtcg cctcgacgat ggccagcgcc tcgccgcgct cggcgatgtc gagccgggtg
     3181 gcgataggca gcgacttcag cccgaccagc gcgcggatga ccggcggctg tgtcgaactc
     3241 aatgcagcgg ttggaggctg cgcgtggctg aggtcgagca tcatgatggc cgggccgtcg
     3301 agctggcccg atggcgggat ggcgccggcg ctctcgccgg ccagcagcct gcaggcggcg
     3361 tcggcgcggc gggcgaacgg ctcggtgagc tcccagttgc gcacgatggc gcaggcgccc
     3421 tggcgctcgc cggccatcat catggcattg gccacggtgg tggcgctcgt cggatcgagg
     3481 tagccgccgg cgctgcgcac catttcgttc aggctctcgc cctcgcccat cgccgccagt
     3541 ttctcgacct tgcgcgcgaa caggctgggc ggcgggctgc cgtcgggcgc gggcggcgtg
     3601 agcgcgctca ccagcaccgt gaactgcagg tcgcgcaacg cgcggctgcg cggcgcggcc
     3661 ggcagcgccg ataccagctg cttggcggtg ccaagcgacg tgccgttcca ggcgtcggcc
     3721 ggcatgccgc cggtttgtac cgtcaggaag ccggtcggct tgtcgtcgaa attcggcgcc
     3781 tgggcaaaga cctgggtcgt ggccaaag
//
LOCUS       DASWGA010000784         2999 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1349598, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000784 DASWGA010000000
VERSION     DASWGA010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1349598"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VF991_18245"
     CDS             <1..598
                     /locus_tag="VF991_18245"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9558439.1"
                     /translation="DFTRKYYLPGRDRLIERLAPPPGGRVLEVGCGTARNLVRAAQAW
                     PGARFFGIDISAEMLDTGRRVVGRAGLAQRIELARADATSFDPAWLFGVPCFSRIIFS
                     YSLSMMPAWRAVLGEALRWLAPDGELHIVDFGGQERLPRWFRAGLRRWLARFHVTPRD
                     ELEAELKGLTSHAGALRLFERPHRGYAQYAVLSRDLKG"
     gene            complement(612..1655)
                     /locus_tag="VF991_18250"
     CDS             complement(612..1655)
                     /locus_tag="VF991_18250"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9558440.1"
                     /translation="MSGTSPLILVVDDVEDNRYTLTRRLRREGFERLVEAANGREALE
                     KLESEDVDLVLLDIMMPEIDGFEVLRRMRTDTRLRHVGVIIISASEELEAVVKAIQLG
                     AEDYIPKPFNPVLLKARIDASLARKRLRDHEAAHTRRIEEERRRADRFLRAILPDEAV
                     RELKATNNVRPRRFADVAILFCDVVGFTPYCEGNPPEVVVEVLGRLIDRFEDIAQHRG
                     LEKLKTVGDAFIATAGLLRTVESPVLACVKAGHDMVAAAGQLEPPWQVRVGIHQGPVV
                     AGIMGSQRFQFDLWGDAVNTAARIASACQPGAVTVAADTWLLIRDECRGRSRGPVALK
                     GKGDIELIEVVAT"
     gene            complement(1652..2047)
                     /locus_tag="VF991_18255"
     CDS             complement(1652..2047)
                     /locus_tag="VF991_18255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018329846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9558441.1"
                     /translation="MSDASGRIRVVYVEDDGDNVYVLTRRLGRRGFDVVVAGDGAAGI
                     ETIRKTHPALVLMDMSLPVMDGWEATRRLKADPATRDIPVIGLSSHAMIGDREVALSA
                     GCDDYDTKPIELERLLAKMHHLLVRDATP"
     gene            complement(2034..>2999)
                     /locus_tag="VF991_18260"
     CDS             complement(2034..>2999)
                     /locus_tag="VF991_18260"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9558442.1"
                     /translation="EMVRIGHVTTGGRDPSDWIEWRLSIHLSQSAPLELKLSDGRWLS
                     ISERRTQEGGVVGIYADITTLKQREEELSCLVDSLAVARDEAQEANHAKSRFLATMSH
                     ELRTPLNAILGIGDMMREEAEEAGLDDLLDPLGRINRAGRHLLQLVDDVLDLSKIEAG
                     RLEVQIEDLPLRSFVADIETTVRPLAARNGNRFVCDCPADIGNVQADPTRLRQVVLNL
                     LGNACKFTERGEIRLDVSCDASRIKFAVADTGIGISEEQLPKLFAEFTQADASTTRRY
                     GGTGLGLAISRRLCRMMGGDIGVASKPGIGSTFTAWLPARPDVRR"
BASE COUNT          456 a         1021 c         1001 g          521 t
ORIGIN      
        1 cgacttcacg cgcaaatact acctgccggg ccgcgaccgc ctgatcgagc ggctggcgcc
       61 gccgccgggc gggcgggtgc tcgaggtggg ctgcggcacc gcgcgcaacc tggtgcgggc
      121 cgcccaggcc tggcccggcg cccgcttttt cggcatcgac atctcggccg agatgctgga
      181 caccggacgc cgggtcgtcg ggcgggcagg gctggcgcag cgcatcgagc tcgcccgcgc
      241 tgacgccacg tcgttcgatc cggcgtggct gttcggcgtg ccctgcttct cgcgcatcat
      301 cttctcctac agcctgtcga tgatgcccgc gtggcgcgcc gtgctcggcg aggcgctgcg
      361 ctggttggcg ccggacggcg agctgcacat cgttgatttc ggcggccagg agcggctgcc
      421 gcgctggttc cgcgccgggt tgcgccggtg gctggcacgg tttcacgtca cgccgcgcga
      481 cgagctggaa gccgagctta agggactgac gagccatgcc ggcgccttgc gcctctttga
      541 gcggcctcat cgcggctatg cgcaatacgc cgtgctcagt cgcgacttga agggctgacc
      601 atcgcccgac cctaggtcgc cacgacctcg atcaattcga tgtcaccctt gcctttgagc
      661 gccactggcc ctcggctgcg gccgcgacac tcgtcgcgga tcagcagcca tgtgtcggct
      721 gcaaccgtca cggcccccgg ctggcatgcc gatgcgatcc gggccgcggt gttgacggca
      781 tcgccccaaa gatcgaactg gaatcgctgg ctgcccatga tgcccgccac caccggcccc
      841 tggtggatgc cgacccgcac ctgccagggc ggctcgagct ggcctgctgc cgccaccatg
      901 tcgtgccctg ccttgacgca ggccagcacc ggactttcga ccgtacgcag caggccggcc
      961 gtggcaatga acgcgtcgcc caccgtcttg agtttctcca gtccacggtg ctgggcgata
     1021 tcctcgaagc gatcgatcag gcggcccagc acctcgacga ccacttccgg cggattgccc
     1081 tcgcaatacg gggtgaagcc gacgacgtcg cagaacagga tggcgacgtc ggcgaagcgt
     1141 cgcggccgga cattgttggt ggccttgagt tcgcgcaccg cctcgtcagg cagaatggcg
     1201 cgcaggaacc ggtcggcccg acggcgttcc tcctcgatgc ggcgcgtatg ggcggcctca
     1261 tgatcgcgca accgcttgcg cgccagcgaa gcgtcgatgc gggccttgag aaggacaggg
     1321 ttgaacggct tgggaatgta gtcctcggcg ccgagctgaa tggccttgac gacggcctcc
     1381 agttcctccg aggccgagat gatgatcacg ccgacatggc gcaggcgcgt atcggtccgc
     1441 atgcggcgca acacctcgaa accatcgatt tcgggcatca tgatgtcgag caagacgaga
     1501 tcgacgtctt cgctctcgag cttttcgagc gcttcgcggc cgttcgcggc ctcgacaagc
     1561 cgctcgaacc cctcgcgccg aagccgccgt gtcagcgtgt agcgattgtc ctcgacgtcg
     1621 tcgaccacga ggatcagggg cgacgttccg ctcatggcgt tgcgtcccgc accagcaaat
     1681 ggtgcatctt ggccagcaac cgctcgagct cgatcggctt ggtgtcgtag tcgtcgcagc
     1741 cagccgacaa ggcgacctcg cggtcgccga tcatggcgtg cgacgacagg ccgatgaccg
     1801 ggatgtcgcg tgtcgccggg tcggccttga gacggcgcgt cgcctcccag ccgtccatca
     1861 cgggaaggct catgtccatc aggacgaggg cggggtgcgt cttgcgtatc gtctcgatgc
     1921 cggcagcgcc gtcgccggcc acgaccacgt cgaaaccgcg ccgcccgagc cggcgcgtca
     1981 ggacgtagac attgtccccg tcatcttcga catagacgac gcggatgcgg ccgctagcgt
     2041 cggacatcgg gtctggccgg cagccacgcg gtgaacgtgc tgccgatccc tggcttgctg
     2101 gcgacgccga tatcgccgcc catcatgcgg cacagcctgc gactgatcgc cagtcccaga
     2161 ccggtgccgc catagcgccg cgtggtcgag gcgtcggcct gggtgaactc ggcaaagagc
     2221 ttcgggagct gctcttcgga aatgccgatg ccggtgtcgg cgacggcgaa tttgatgcgg
     2281 ctcgcgtcgc aactcacatc gagccggatt tcgccgcgct cggtgaactt gcaggcgttg
     2341 cccagcagat tgaggacgac ctggcgcagc cgcgtcgggt cggcctgcac gtttccaatg
     2401 tctgccggac agtcgcagac gaagcggttg ccgttgcgcg cggccagcgg gcgaacggtc
     2461 gtctcgatgt cggcgacaaa gctgcgcagc ggcagatcct cgatctgaac ctccagtcgt
     2521 ccagcctcga tcttcgagag atccaggacg tcgtcgacga gctggagcaa atgccggccg
     2581 gctcggttga tccggccgag gggatcgagc agatcgtcga ggccggcttc ctcggcttct
     2641 tcgcgcatca tgtcgccgat gccgaggatg gcgttaagcg gcgtccgcag ctcgtggctc
     2701 atggtcgcca ggaagcggct cttggcatgg ttggcctcct gcgcctcgtc gcgcgcgacg
     2761 gccaggctgt cgaccaggca cgacagttcc tcctcgcgct gcttcagcgt cgtgatgtcg
     2821 gcatagatcc cgacgacgcc cccttcctgt gtccgccgct cgctgatcga cagccatcgc
     2881 ccgtcggaaa gcttcaattc gagcggcgcc gactggctga ggtggatcga caggcgccac
     2941 tcgatccagt ccgacggatc gcgcccgccc gtggtgacat ggccgatgcg gaccatttc
//
LOCUS       DASWGA010000785        16806 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1349669, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000785 DASWGA010000000
VERSION     DASWGA010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 16806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16806
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1349669"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /locus_tag="VF991_18265"
     CDS             complement(<1..473)
                     /locus_tag="VF991_18265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558443.1"
                     /translation="MASSFGVHHEWGKLSEVVIGISPAEDFVVFYEDSQRWLVPPGDA
                     FSRNHAGRRLIDIDAERAGRIERQVDALADRVAREGVTVHRPQRLEGDERTFLAPNGE
                     GAQLFARDGMIVIADHVIDCSLRLKCRQRERYGLRPIIQQAVQQRGARWSSVPLGS"
     gene            complement(481..1887)
                     /locus_tag="VF991_18270"
     CDS             complement(481..1887)
                     /locus_tag="VF991_18270"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HEX9558444.1"
                     /translation="MSLITPVILVGGSGKRLWPLSRESMPKQFVPLLGSQSTFQQTLE
                     RVADRSLFARPVVATNEAYRFMAEQQAKDIGMEIDILVEPSRRDSGPAMAAAAAYTRN
                     QGAKAVLALASDHLVIGAEEFRAACREGLAAVQQGGIVTFGIPPTEPKTDYGYIRPGS
                     EQIGPVQKVAAFVEKPNAQTALRYIAEGLLWNSGNFLFPPELLLAEMTRFEPAIAAAA
                     EEAVAKARKTGSTVFLDAEAFDKAPAKSIDYAVMERTDKCWVVPAKFRWSDLGTWDAL
                     LDVGQADSAGNVTEGPVEIDHVRNSYVRSDGPLTAVIGVEEVVVVAMNDAVLVGHRDN
                     LPRLKDVVQRMSDGKHKAATEHAVMHRPWGSYQDIDRGERFRAKRLSVKPGGKLSLQS
                     HKRRAEHWVVVKGIAEVVLDGRIMTLHENESVYIPIGGIHRLSNPGSEPLEVVEVQTG
                     DYLEEDDITRYEDIYARV"
     gene            complement(1981..3174)
                     /locus_tag="VF991_18275"
     CDS             complement(1981..3174)
                     /locus_tag="VF991_18275"
                     /inference="COORDINATES: protein motif:HMM:NF012730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-gated ion channel"
                     /protein_id="HEX9558445.1"
                     /translation="MTDRAQTLRARIYTALRYTDPSPAGRRWRAIHLSVLCIGLLAVI
                     LLSIDELPKPTKYGLRLTIVLVAIVFFVEYVVRLWIAPEAARFDQLSSAMARLHWATS
                     AQGLVGLLAIMPAVMQAGGYGITGSDTASVFCILWILKLGLHAPAFGTLSRVVSNERA
                     PLASVLIIFGIILMIAATAAHMLERVRQPEQFGSLPGAMWWAVVTLTTTGYGDVVPLT
                     VGGRMIGAMLMISGIAVLALMTGVLATGFAQEERRREYLRVWEQVARVPIFASLGVVT
                     LSEIVGKLRTRYYPGRITVVRRGDPGDSMFFISGGEVEVRLPNGGSVRLGDGAFFGEM
                     ALLERQPRTASVATTKPTTLLVLYASDFYEIASHIPALAEAVEVEARRRREENLGRQA
                     SETKR"
     gene            3270..4280
                     /locus_tag="VF991_18280"
     CDS             3270..4280
                     /locus_tag="VF991_18280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9558446.1"
                     /translation="MRLGRRTALKAGVGAGVAMLGAPAVVQAQAALKLPLSTVWPDGN
                     FHTINAKRFADEVKTATSGAVDIEVKSGGQLGFKGPEQLRAVRDGLVPMADILNIQQI
                     GDEPIMGVEGIPFISNNVDELKVLHKYLRPEYEKVALRNNQTILYMVPWPTQYLHLKV
                     KAESLDALKGIKIRVPDKNAQDMCSAIGMAPALIPWGETIAALSSGVVSGVSTSSVSG
                     VDGKFWEFLKFFHQTNHAWSCQIVTINNDTWKKISPANQKAMTDLAKKLEPDFWASSL
                     KADADSSKKLSDGGMQMVIPPPQMMADLRKKTEPMIADFIKRVPAAEKPIKAYLVEMK
                     RA"
     gene            4323..5333
                     /locus_tag="VF991_18285"
     CDS             4323..5333
                     /locus_tag="VF991_18285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9558447.1"
                     /translation="MTMRRRQALKAGVGALAGIVGTPAIAQAQAALKLPLSTAWPDGN
                     FHVVNARRFAEEVKKATGGAVDIDVKSGGQLGFKGPEHLRAVRDGLVPMADILNVQQV
                     GDEPLMGIEGIPFLAGSPDELKVLQKHLRPEYERIAAKNNQTILYIVPWPNQYLHLRV
                     KAETVEALKGIKIRTADKNAQEMWNTVGMAAVVIPWGETIPALSSGAVSGVSTSAVSG
                     VDGKFWEFLKFFHATNHQWSSQLVTINNDAWKKIKPEHQKAIADLGKKLEPEFWVSAF
                     QADKDSSKKMIESGMTRVTVPEPMMADLRKRTAGLLADFMKRVPSSQAPIKAYLAEMK
                     RA"
     gene            5330..5914
                     /locus_tag="VF991_18290"
     CDS             5330..5914
                     /locus_tag="VF991_18290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX9558448.1"
                     /translation="MTHGQGSPNAGAPPLLRSLLDGIDVLSRLDGWLGVGCLVTLTGL
                     MLAEVAVRALSNVFPWVPADIPVAWEYSSYLMAASFTFGAAMTLRAGGHIRVTLVLAR
                     VSPAARRRMETVLAALGACFCGYLAWAMAYFTWRSFDSGQTSVSSGTLVWIPQAFVAF
                     GIVLLTVQFVARFFQAALGLPLEDINMRAGAVAE"
     gene            5940..7244
                     /locus_tag="VF991_18295"
     CDS             5940..7244
                     /locus_tag="VF991_18295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX9558449.1"
                     /translation="MLIIVATMFVVLFAFLAGGLWIGWTLAVTGTILLALFRDIPLDK
                     LLAQYAWNILTTQELLALPLFILMGEILFRTRLSQSLFRGLSPWAALLPGRLLHVNVI
                     GCTIFAAISGSSAATTQVVGRISLAELLKRGYSKDVAIGSLAGAGTLGFLIPPSNIMI
                     IYGVLGDVSIAKLFTAGFIPGFLLAGCFMVWIMIHTAIKPSLVPAAERKVRIASMAEY
                     LASIRELGPAVFLILCVLGSMYGGLATPSEAAGVGVFGALIVARLQGELKWPALRAIG
                     IGAVQTCSMIALIVLGASILGSAAAFLSIPAAVAEMVTSLNLSPFMLIVALIVFYLIL
                     GCFLDGFSMIVMTLPIVMPIVKVAGFDPIWFGIFLVLVVEMAQITPPVGFNLFVIQGL
                     TEDGLGYIARVTLPYLLIMVGFTMVITLLPDIALWLPRYLSS"
     gene            7272..8636
                     /locus_tag="VF991_18300"
     CDS             7272..8636
                     /locus_tag="VF991_18300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HEX9558450.1"
                     /translation="MEARQVRTAADARRIVKERGLSHVKVGVHDIDGILRGKYIHIDK
                     FHSALEGGMGFCDVVLGWDANDQLYDNVTYTGWHTAYPDAMVRLLPETCREIATEPGN
                     LLFLCEFVERAEELCPRGVLRRVLARAHEMGFEVKVGFEYEFFVFAETPFSIREKGYR
                     NLKPISPGFFGYSVLRNSVLSDWYKDLLAMCETMDMGIEGLHTETGAGVLEAALRVQD
                     GLRAADGAALFKLYTKVLAQKRDWLATFMAKWSKDWPGCGGHMHMSLWKGGKSAFYDD
                     KAPHHMNTTMRHFVGGQQALMPELLAMVASNVNSYRRLIPGFWAPTVSSWGVENRTTS
                     LRVIPGSAKSTRVEYRVAAADANPYLALAAAVGSGLWGIENKIDPGEPIKGNSYDKKH
                     PAKSQLPRTLMEAAGRLKASKPARELFGEAFVDHYSATREWEEREFRKAITDWELDRY
                     MEII"
     gene            8636..9802
                     /locus_tag="VF991_18305"
     CDS             8636..9802
                     /locus_tag="VF991_18305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX9558451.1"
                     /translation="MSQPLVGNWSYPTSIRFGAGRIRELPDAAKAVGLKRPLLVTDPG
                     LAKLPMIADAMVALRKAGLEVALFSDVKPNPIARNVEAGVKVLRAGKHDGVIAWGGGS
                     GIDAAKAIAFMAGQTRPMWDFEDIGDWWTRANPAGIYPSIAVPTTAGTGSETGRASVI
                     TNEETHTKKVIFHPKMMPSIVIADPELTVGLPPKLTAGTGMDAFIHCLEAYCAPGYHP
                     YAEGIAVEGMRLVKENLARAVEDGRDIEARGHMLAASQMGSTAFQKGLGAIHSLSHPV
                     GATLDTHHGLTNAVAMPYVLKFNRPAIDDKIQRLSRWLGLRNPTFDGFMDWSLELRRQ
                     IGIPHTLAELGVTESHLEKFSEMAAVDPTAGGNPVKAGVPEMRRMYEAALAGRL"
     gene            9799..12246
                     /locus_tag="VF991_18310"
     CDS             9799..12246
                     /locus_tag="VF991_18310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013896957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9558452.1"
                     /translation="MSTFPTQARVVIVGGGIMGCSTAYHLAKLGWKDVVLLEQGRLSG
                     GTTWHAAGLVGQLRSYQNLTRLIRYSTELYSKLEAETGLATGWKQCGSLSVARTEERM
                     VLLRRSAAMANAQGVDCEALTPKQAGEKYPIMRTDDLVGAVWLPGDGKANPADITQAL
                     ARGARTGGVRIFEKTRVTSVDTKDGCVTGVQTTEGPITAEIVVNCAGQWARQLGRSVG
                     ATVPLYSCEHMYIVTEKMEGVPRDLPVMRDPDGYIYFKEEVGGLLMGGFEPEAKPWNK
                     DIIPDDFEFGMLPDDWDQFQILMDNALIRVPALEKTGVKTFMNGPESFTPDLNYILGE
                     APQLKGFFVGAGFNSMGIASSGGAGMALAEWIVAGEPTLDLWPVDIRRFAGFHGNDAW
                     LRARVAETLGLHYKMPWPQREHESGRPFRRSPLYDRLKARGAWFGNKMGWERPNWFAG
                     VGKTPDMQYGWGRGAWFDAVASEHRATREDVTVVDETSFGKILVQGRDAEAALQRLAA
                     NDVAVPVGRTVYTGILNERGTFESDLTIARLARDKFLIITGSAQPVRDMDWIGKHIAS
                     AHVTLADVTSGWTVLSLMGPKSRALLHKVSRADFSNEGFAFATIREVGVGHATVLASR
                     RTYMGELGWELYVPVEFAVTVFETLHEAGAELGLRDAGYYAVETLRLEKGYRAWGREL
                     TPDDTPFQAGLGWAVKLDKPGGFIGQKALVEAKAKPLARRLVSVVVADSEPLLWGGET
                     LLRDGRPVGDLTSAGYGHTVGASVGLGYVRREDGAPIDAAWLESGRFEVDLAGTRLKS
                     KVSLRCPYDPAGARIKG"
     gene            complement(12213..13892)
                     /locus_tag="VF991_18315"
     CDS             complement(12213..13892)
                     /locus_tag="VF991_18315"
                     /inference="COORDINATES: protein motif:HMM:TIGR00704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005436 - sodium:phosphate symporter
                     activity [Evidence IEA];
                     GO_process: GO:0044341 - sodium-dependent phosphate
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HEX9558453.1"
                     /translation="MHGVETILNVLGSVALLLWGVRMVRTGLTRAFGAALRRAIAACS
                     RNRFTAFLGGIAVTGLLQSSTATSLLVSSFAGRGLIPLSIAFAIMLGADIGTTIAAQI
                     LSFDLGWVSPLLIGAGVIAFLSAQSDKPRHLGRVAIGLGLMLLSLKLLALATQPLRGA
                     PAFMALLQGLQDEYVIAVVVGTLATWFVHSSLSTVLLVMSFAGGGLIEPKLALALVIG
                     ANIGGALAPYMAQSGADVDARRVPLANLMTRAIVGVALLPFLGPAVEWLSLIDPSATR
                     LPVNFHTLFNVLAALVFLPLVDVVAWACRRLLPAKPAVDDPGKPRHLDPNVLDSPTEA
                     LGCALRETLNLGDRVADMLRQTIDVFERNDPKAVKAIEAADDAVDRLYEAIKLYLIQT
                     SRTELGEEDGRRYVEILTFTTNLEHIGDIVDKNLMELAAKKIRNRYAFSPEGMAELRA
                     FHARVLENLKLALNVFTTRDIALARRLVAEKTAMREAESKAADSHFARLREGRPESIE
                     TSSIHMDVIRDLKRINGHLASVAYPILEAAGELADTRLKTAQPLMRAPAGS"
     gene            complement(13948..14814)
                     /locus_tag="VF991_18320"
     CDS             complement(13948..14814)
                     /locus_tag="VF991_18320"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9558454.1"
                     /translation="MTPSQLRAFHLVAESGSFSAAARASGLSQPNLSGQVTALEKAYG
                     VRLFDRRGRSVTPTQSGRQLHGVTTRLFALQDEARALLAGEQALTRGHLRIAADSAHH
                     VVPIMAALRRRADGLTFTLSIDNSAVVLERLLRHEADVAVMAKSVSDPRLHAVRLRTD
                     RLVLFVPARHALAKRGRVPLGALAGQELVLRERGSITREVLEQAMAAADIQPGAIVEV
                     QTREGVREAVAAGFGIGAVFASELGDDRRFRRILVTDADLDVAEYAVSLQERRRVALV
                     RAFMEEASRQGA"
     gene            14887..16041
                     /locus_tag="VF991_18325"
     CDS             14887..16041
                     /locus_tag="VF991_18325"
                     /EC_number="2.6.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047304 - 2-aminoethylphosphonate-pyruvate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0019700 - organic phosphonate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-aminoethylphosphonate--pyruvate transaminase"
                     /protein_id="HEX9558455.1"
                     /translation="MQPTTPAASETGDPLLLTPGPLTTSASVKQAMVHDWGSRDAGFL
                     RVNRMVLDKIVELAGGQGSHVTVPVQGSGTFAVEAMITSFVPKSGKLLVLINGAYGQR
                     ARRIVEIAGRAAASLEMPEDMPPDLPLLERMLAEDKAITHVFAVHCETTSGILNPIVE
                     IAAIVASHRRRLLVDSMSAFGALPIDAREIRYDALAASSNKCLEGVPGLGFVICRNEA
                     LEECEGNATTLVLDLFDQAEAFARTGQYRYTPPIHVIVALGKAIEEHAAEGGVLGRGR
                     RYRDNAKVLIDGMRAMGFRTLLPDRLQAPIIVTFHMPTDPKFVFQRFYDGLKDRGYVI
                     YPGKLTVADSFRMGCIGRLYPEHMKGALAAVREVLDEMRVSNGGPALAAE"
     gene            16050..>16806
                     /locus_tag="VF991_18330"
     CDS             16050..>16806
                     /locus_tag="VF991_18330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX9558456.1"
                     /translation="MAPDSLNTAGGDVTVNGRRYRLPKQPTVVVCVDGSEPGYIERAV
                     EAGRAPWFGKVLTQGTSLTADCVVPSFTNPNNLSIVTGQPPAVHGICGNYFLDPDSGE
                     EVMMNDPKFLRVETLFPSFQRAGCRIAVVTAKDKLRGLLGKGLELGAGKAFSFSSEKS
                     DKATLAENGIDKVNDLVGMAVPDVYSAGLSEFVFAAGVKIMERDRPQIMYLSTTDYIQ
                     HKHAPGTPVANDFYAMMDRYMAKLDALGCTIVLT"
BASE COUNT         2824 a         5570 c         5654 g         2758 t
ORIGIN      
        1 gagcccagcg gcacgctcga ccagcgcgcg ccgcgctgct gcacggcctg ctggatgatc
       61 ggccgcagcc catagcgttc gcgttgccgg catttcagcc ggagcgagca atcgatgacg
      121 tgatcggcga tcacgatcat gccgtcacgg gcgaagagct gggcgccctc gccgttgggc
      181 gccaggaagg tgcgctcgtc gccttcgagt cgttgcgggc ggtgcacggt cacgccctcg
      241 cgcgccaccc ggtcggccag cgcatcgacc tggcgctcga tgcgtccggc ccgctcggcg
      301 tcgatgtcga tcaggcggcg gccggcatgg ttgcggctga aggcgtcgcc gggcgggacc
      361 agccagcgct gcgagtcttc gtagaaaacg acgaaatcct cggctgggga aatgccgatc
      421 acgacctcgc tgagcttgcc ccactcgtgg tggacgccga aggaggaagc catgcgccgg
      481 tcagacccgc gcgtagatgt cttcgtagcg cgtgatgtcg tcttcctcga gatagtcgcc
      541 ggtctgcact tcgacgactt cgagcggctc actgccggga ttgctcagcc gatggatgcc
      601 gccgatcggg atatagaccg attcgttttc gtgcagggtc atgatcctgc cgtcgagcac
      661 cacctcggcg atgcccttga ccaccaccca atgctcggcc cggcgcttgt ggctctgcag
      721 gctgagcttg ccgccgggct tgacgctgag ccgcttggcg cgaaagcgct cgccacggtc
      781 gatgtcctgg tagctgcccc acggccggtg cattacggcg tgctcggtgg cggccttgtg
      841 cttgccgtcc gacatgcgct gcacgacgtc cttcagccgc ggaaggttgt cgcgatggcc
      901 gaccagcacg gcatcgttca tcgccacgac gaccacttcc tcgacgccga tcaccgcggt
      961 gagcggcccg tcggagcgga cgtaggagtt gcgcacatgg tcgatctcga ccgggccttc
     1021 ggtgacgttg ccggcgctgt cggcctggcc gacatcgagc agcgcgtccc aggtgccgag
     1081 gtcggaccag cggaacttcg ccggcaccac ccagcacttg tcggtgcgct ccatgaccgc
     1141 gtagtcgatc gatttggctg gcgccttgtc gaaagcctcg gcgtcgagaa acaccgtcga
     1201 gccggtcttc ctggccttgg cgacagcctc ttcggcggcg gcggcgatgg ccggctcgaa
     1261 gcgggtcatc tcggccagca gcagctcggg cgggaacagg aagttgccgc tgttccacag
     1321 caggccctcg gcgatgtagc gcaacgccgt ctgggcattg ggcttttcga cgaaggcggc
     1381 gaccttctgc accgggccga tctgctcgct gcccggccgg atgtagccgt aatcggtctt
     1441 gggttcggtc ggcgggatgc cgaaggtgac gatgccgccc tgctgcacgg cggccaggcc
     1501 ttcgcggcag gcggcgcgga attcctcggc accgatcacc agatggtccg atgccagggc
     1561 cagcacggcc ttggcgccct ggttgcgggt gtaggccgca gcggcagcca tcgccggtcc
     1621 cgaatcgcgc cgcgacggct cgaccaggat atcgatctcc atgccgatat ccttggcctg
     1681 ctgctcggcc atgaagcggt aggcctcgtt ggtggcgacc accggacggg cgaacaggct
     1741 gcggtcggct acgcgctcca gggtctgctg gaaggtcgac tggctgccca gaagcggcac
     1801 gaactgcttg ggcatgcttt cgcgcgacag cggccacagg cgcttgccgg agcctccgac
     1861 caggatgacg ggcgtgatga gcgacatcgg actttcttta cggaatggcc tcgccattgg
     1921 ggcgcgccgc gatatagccg aaggcgggga gcgggccaat ggccctgaaa tcggtttcga
     1981 tcatcgcttc gtctcgctcg cctggcgacc gagattctcc tcgcggcggc gccgcgcctc
     2041 gacttcaacg gcttcggcaa gtgccggaat atgcgaggcg atctcgtaga agtcgctggc
     2101 ataaaggaca agcagcgtgg tcggcttggt ggtcgccacc gaggcggtgc gcggctgacg
     2161 ctcgagcagg gccatctcgc cgaagaaggc gccgtcgccc agccgcaccg acccgccgtt
     2221 gggcaggcgg acctcgactt cgccgccgga gatgaagaac atcgaatcgc cggggtcgcc
     2281 gcggcggacc acggtgatgc gcccgggata gtagcgggtc ctgagcttgc ccacgatctc
     2341 cgacagcgtg acgacgccca gcgaggcgaa aatcggcacg cgcgccacct gctcccatac
     2401 cctgagatat tcccgccgcc gctcctcctg ggcgaaaccg gtggcgagca cgccggtcat
     2461 cagcgccagc accgcgatgc cgctgatcat cagcatcgcg ccgatcatgc gcccgccgac
     2521 cgtgagcggc acgacgtcgc catagccggt cgtggtcagc gtcacgactg cccaccacat
     2581 cgcccccggc aggctgccga actgctcggg ctggcggacc cgttccagca tgtgggccgc
     2641 ggtggcggcg atcatcagga tgatgccgaa gatgatcagc acgctggcca gcggagcgcg
     2701 ctcgttcgac acgactcggg agagcgtgcc gaaggcgggc gcatgcaggc caagcttgag
     2761 gatccacagg atgcagaaca ccgatgcggt atcggagccg gtgatgccgt agccgcccgc
     2821 ctgcatgacc gccggcatga tggcgagcag cccgaccagg ccctgcgccg atgtcgccca
     2881 gtgcaggcgc gccatggcgg acgacagctg gtcgaaacgc gcggcctccg gcgctatcca
     2941 tagccgcacc acgtactcga cgaagaagac gatggcgacc aacacgatgg tcagccgcag
     3001 cccgtacttg gtcggcttgg gcaattcgtc gatcgacagc aggatgacgg cgagcaggcc
     3061 gatgcacagc acggacaggt ggatggcccg ccaccgccgg ccggcggggc tgggatcggt
     3121 gtagcgcagc gcggtgtaga tccgtgcgcg cagcgtctgg gccctatccg tcaccgggtg
     3181 accataggcg gcatggcctg caaattgcaa cgcggctgaa ctggggctac ggtcgcgtcc
     3241 ggggaaccaa caagcaaatg gggacttcca tgagactggg acgcaggact gccttgaagg
     3301 caggcgtggg agcaggcgtg gcgatgctgg gcgcgccggc cgtcgtgcag gctcaggcgg
     3361 cgctgaaact gccgctgtcg acggtgtggc cggacggcaa tttccacacg atcaatgcca
     3421 agcgcttcgc cgacgaggtc aagacggcga cctcgggcgc ggttgacatc gaggtcaagt
     3481 cgggcggtca gttgggcttc aaggggcccg agcagctgcg cgccgtgcgc gacgggctgg
     3541 tgccgatggc cgacatcctc aacatccagc agatcggtga cgagccgatc atgggcgtcg
     3601 agggcatccc gttcatctcg aacaacgtcg acgagctcaa ggttttgcac aaatacctgc
     3661 ggcccgagta cgagaaggtg gcgctcagga acaaccagac cattctctac atggtgccgt
     3721 ggccgaccca gtacctgcac ctcaaggtga aagccgagtc gctcgacgcc ctcaagggca
     3781 tcaagatccg cgtgcccgac aagaacgccc aggacatgtg cagcgccatc ggcatggcgc
     3841 cggcgctgat cccgtggggc gagaccattg cggcgctgtc gtcgggcgtc gtgtcgggtg
     3901 tctcgacctc gtcggtatcg ggcgtcgacg gaaagttctg ggaattcctc aagttcttcc
     3961 accagaccaa ccatgcctgg tcgtgccaga tcgtcaccat caacaacgac acctggaaga
     4021 agatttcgcc ggccaatcag aaggccatga ccgacctcgc caagaagctc gagccggact
     4081 tctgggcatc gtcgctgaag gccgacgccg acagcagcaa gaagctcagc gacggcggca
     4141 tgcagatggt gattccgccg ccgcagatga tggccgacct gcgcaagaag accgaaccga
     4201 tgatcgccga cttcatcaag cgcgtgccgg ccgccgaaaa gccgatcaag gcctacctcg
     4261 tcgaaatgaa acgcgcgtga ggccagctac cggctcgggc gaacacatgt gatgaggccg
     4321 tcatgacgat gcgacggaga caggcgctca aggcgggcgt cggtgcattg gcaggtattg
     4381 tcggcacgcc ggcgatcgcg caggcccagg cggctctgaa actgccgttg tcgacggctt
     4441 ggcccgacgg caactttcac gtcgtcaatg ccagacgctt cgccgaggag gtcaagaagg
     4501 cgaccggcgg ggcggtcgat atcgacgtaa agtcgggcgg ccagctgggc ttcaaggggc
     4561 cggaacatct gcgtgccgtg cgcgacggcc tggtgccgat ggccgatatc ctcaatgtcc
     4621 agcaggtcgg cgacgaaccg ctcatgggca tcgaaggcat tcccttcctg gccgggtcgc
     4681 cggatgagct gaaggtgctg cagaagcact tgcggcccga atacgaaagg atcgccgcca
     4741 agaacaacca gacgattctc tacatcgtgc cgtggccgaa ccaatacctg cacctcaggg
     4801 tgaaggccga gaccgtcgag gcgttgaagg gcatcaagat ccgtactgcc gacaagaatg
     4861 cccaggaaat gtggaacact gtgggcatgg cggccgtcgt gatcccgtgg ggcgagacga
     4921 tcccggcgtt gtcgtcgggc gcggtgtcgg gcgtgtcgac ctcggcggtg tcgggcgtcg
     4981 acggcaagtt ctgggagttc ctgaaattct ttcacgccac caatcatcag tggtcttcgc
     5041 agctcgtgac catcaacaac gacgcctgga agaagatcaa acccgagcac cagaaggcaa
     5101 tcgccgacct cggcaagaag ctcgagccgg agttctgggt ttccgccttt caggccgaca
     5161 aggacagctc gaagaagatg atcgaaagcg gcatgacgcg ggtcaccgtg ccggagccca
     5221 tgatggccga cctgcgcaag cgcaccgccg gtctgctggc tgatttcatg aagcgcgtgc
     5281 cgtcctcgca ggcgccgatc aaggcctatc tcgccgaaat gaagcgggca tgacgcacgg
     5341 gcaggggagc cccaacgcag gggcgccgcc gctgctgcgt tcgctgctcg atggcatcga
     5401 tgtgctgagc cgcctcgacg gctggctcgg cgtgggctgt ctggtgacgc tgacggggct
     5461 catgctggcc gaagtggcgg tgcgtgccct gtcgaacgtc tttccctggg ttcccgccga
     5521 tattcccgtc gcctgggagt acagctccta cctcatggcg gcgagcttca ccttcggcgc
     5581 cgcgatgacc ctgcgggcgg gtggccacat ccgtgtcacg ctggtcttgg cgcgtgtgtc
     5641 gccggcggcg cgccgacgga tggagacggt gctcgcggcg ttgggggcgt gcttctgcgg
     5701 ctaccttgcc tgggcgatgg cctacttcac ctggcgcagc ttcgatagcg gccagacctc
     5761 ggtgtcgagc ggcacgctgg tctggattcc gcaggccttc gtcgccttcg gcatcgttct
     5821 tctgacggtg cagttcgtcg cccgcttctt tcaggccgcc ctcggcttgc cgctcgagga
     5881 catcaacatg cgtgccggcg cggtcgccga atgacgctga gcgcgatgcg tagccggcca
     5941 tgctgatcat cgtcgccacc atgttcgtgg tgctgttcgc cttcctggcg ggcggcctgt
     6001 ggatcggctg gacgctcgcc gtcaccggca cgatccttct ggcgctgttc cgcgacatcc
     6061 cgctcgacaa gcttttagcg cagtacgcct ggaacatcct gaccacgcag gaactgctgg
     6121 cgctgccgct gttcatcctg atgggcgaga tcctgttccg cacccggctg tcgcagtcgc
     6181 tgttcagggg cctttcgccg tgggcggcat tgctgccggg ccggctgctg cacgtcaacg
     6241 tcatcggctg cacgatcttc gccgccatct ccggctcgtc cgcggcgact acccaggtgg
     6301 tcggccggat ctccctcgcc gaactgctga agcgcggcta ttccaaggac gtcgccatcg
     6361 ggtctcttgc cggcgccggc acgctcggct ttttgatccc gccctccaac atcatgatca
     6421 tctacggcgt gctgggcgat gtctcgatcg ccaagctgtt caccgcgggc ttcatcccgg
     6481 gctttctgct cgctgggtgc ttcatggtct ggatcatgat ccacaccgcg atcaagccgt
     6541 cgctggtgcc agccgcggaa cgcaaggtgc ggatcgcgtc gatggcggaa tatctcgcct
     6601 cgatcaggga actgggacct gcggtgttcc tgatcctgtg cgtgctgggc tcgatgtatg
     6661 gcggcctcgc cacgccctcc gaagcggccg gcgttggcgt gttcggcgcg ttgatcgtcg
     6721 cccgcctgca gggcgagctc aaatggccgg ctttgcgcgc catcggcatc ggcgcggtcc
     6781 agacctgttc gatgatcgca ctgatcgtgc tcggcgcctc gattctcggc agtgctgcgg
     6841 ccttcctcag cattccggcc gcggtcgcgg agatggtgac cagcctcaat ctttcgccct
     6901 tcatgctgat cgtggccttg atcgtcttct atctgatcct cggctgcttt ctcgacggct
     6961 tcagcatgat cgtcatgacg ctccccatcg tcatgccgat cgtgaaggtc gccggcttcg
     7021 atccgatctg gttcggcatc ttcctggtgc tggtggtcga gatggcccag atcaccccgc
     7081 cggtcggctt caatttgttc gtgatccagg gtctcaccga ggacgggctg ggctatatcg
     7141 cccgcgtgac cttgccttac ctcttgatca tggtcggctt caccatggtc atcacgctac
     7201 tccccgacat tgccctctgg cttccgcgct acctcagcag ctagtctgcc gttcgtcaga
     7261 aggggagagc gatggaagcg cgccaggtca gaacagcggc cgacgcccgc aggatcgtca
     7321 aggaacgcgg gctcagccac gtcaaggtgg gcgtccacga catcgacggc atcctgcgcg
     7381 gcaagtacat ccacatcgac aagttccatt cggcgctcga gggcggcatg ggcttctgcg
     7441 acgtcgtgct gggctgggac gccaacgacc agctctacga caacgtcacc tacaccggct
     7501 ggcacaccgc ctatcccgac gccatggtgc gcctgctgcc ggaaacctgc cgcgagatcg
     7561 cgaccgagcc cggcaatctc ctgttcctct gcgaattcgt cgagcgcgcc gaggagcttt
     7621 gcccgcgcgg cgtgctgcgc cgcgtgctgg cgcgcgccca cgagatgggc ttcgaggtca
     7681 aggtcggctt cgaatacgaa ttcttcgtct ttgccgaaac ccccttctcg atccgcgaga
     7741 agggctaccg caacctgaag ccgatctcgc ccggtttctt cggctattcg gtgctgcgca
     7801 actccgtcct gtccgactgg tacaaggacc tgctggcgat gtgcgaaacc atggacatgg
     7861 gcatcgaggg cctgcacacc gagaccggcg ccggcgtgct ggaagccgcc cttcgcgtcc
     7921 aggacggcct gcgcgccgcc gacggcgccg ccctgttcaa gctctacacc aaagtgctgg
     7981 cgcagaagcg cgactggctc gccaccttca tggccaaatg gtcgaaggat tggccgggct
     8041 gcggcggcca catgcacatg tcgctctgga agggcggcaa gtcggccttt tatgacgaca
     8101 aggcgccgca tcacatgaac accaccatgc gccacttcgt cggcggccag caggctctga
     8161 tgcccgagct tttggccatg gtggcgtcca acgtgaactc ctaccgccgg ctcatcccgg
     8221 gcttctgggc acccaccgtg tcgagctggg gcgtcgagaa ccgcacgacg tcgctgcgtg
     8281 tcatcccggg ctcggccaag tcgacccgcg tcgagtatcg agtcgccgcc gccgatgcca
     8341 acccctatct ggcgctcgcc gccgcggtcg ggtcgggcct atggggcatc gaaaacaaga
     8401 tcgaccccgg cgagccgatc aaggggaact catacgacaa gaaacatccg gcaaagtcgc
     8461 agcttccgcg caccttgatg gaggcggcag gacggctcaa agcctccaag ccggcgcgcg
     8521 agctgttcgg cgaggctttc gtcgatcact attcggcaac gcgtgaatgg gaagagcgag
     8581 agttccgcaa ggccatcacg gactgggaac tcgaccgcta catggaaatc atctgatgtc
     8641 gcagcctctc gtcggcaact ggagctaccc gacctcgatc cgtttcggcg ccggccgcat
     8701 tcgcgagctg cccgacgcag ccaaggccgt gggcttgaag cggccgctgc tggtcaccga
     8761 tccgggcctt gccaagctgc cgatgatcgc cgacgccatg gtggcgctgc gcaaggcggg
     8821 cctcgaggtc gccttgttca gcgacgtcaa gcccaacccg atcgcgcgca acgtcgaagc
     8881 cggcgtaaaa gtgctgcgcg ccggcaagca tgacggcgtg atcgcctggg gcggcggctc
     8941 gggcatcgac gccgccaagg cgatcgcctt catggccggc cagacgcggc cgatgtggga
     9001 cttcgaggat atcggcgact ggtggacgcg cgccaatcca gccgggatct atccgtcgat
     9061 cgccgtgccg accacggcgg gcaccggctc ggagaccggc cgcgcctcgg tgatcaccaa
     9121 cgaggagacg cacaccaaga aagtgatctt ccatcccaag atgatgccgt cgatcgtcat
     9181 cgccgatccc gagctgacgg tcggcctgcc gcccaagctg accgccggca ccggcatgga
     9241 cgccttcatc cattgcctgg aagcctattg cgcgccgggc tatcaccctt acgccgaggg
     9301 catcgccgtc gaggggatgc ggctggtgaa ggagaacctc gcgcgcgccg tcgaggacgg
     9361 ccgggacatc gaggcgcgcg gtcacatgct ggcggcctcg cagatgggct cgacggcctt
     9421 ccagaagggg ctgggtgcca tccattcgct gtcgcacccg gtcggcgcca cgctcgacac
     9481 ccatcacggc ctcaccaacg ccgtcgccat gccctatgtg ctaaaattca accggccggc
     9541 catcgacgac aagatccagc ggctgtcgcg ctggctcggc ctgcgcaacc cgaccttcga
     9601 cggctttatg gactggagcc tcgagctgcg ccgccagatc ggcatcccgc ataccctggc
     9661 cgagctcggc gtcacggaaa gccatctcga aaagttctcc gagatggccg ccgtcgatcc
     9721 gacggccggc ggcaatccgg tgaaggcggg tgtgccggag atgcgcagga tgtatgaggc
     9781 cgcgctcgcg ggaaggctgt gagcacgttc cccacccagg cccgcgtcgt catcgtcggc
     9841 ggcggcatca tgggctgctc gacggcctat cacctggcca agctcggctg gaaggacgtg
     9901 gtgctgctgg agcagggacg cctcagcggc ggcacgacct ggcacgcggc gggcctggtc
     9961 ggccagctgc gcagctacca gaacctgacc cgcctgatcc gctacagcac cgagctctat
    10021 tccaagctcg aggccgagac cggcctggcc acgggctgga agcagtgcgg ctcgctctcg
    10081 gtggcgcgca ccgaggagcg catggtgctg ctgcgccgct ccgccgccat ggccaacgcc
    10141 cagggcgtcg actgcgaggc gctgacgccc aaacaggccg gtgagaagta cccgatcatg
    10201 cgcaccgacg atcttgtcgg cgcggtgtgg ctgccgggcg acggcaaggc caatcccgcc
    10261 gacatcaccc aggcgctggc caggggggcg cgcaccggcg gcgtgcgcat cttcgagaag
    10321 acgcgagtca cgtcggtcga caccaaggac ggatgcgtga ccggggtgca gaccaccgag
    10381 ggcccgatca cggccgagat cgtcgtcaat tgcgccggcc aatgggcgcg ccagctcggc
    10441 cgctcggtcg gcgccaccgt gccgctttat tcctgcgagc acatgtacat cgtcaccgag
    10501 aagatggagg gcgtgccgcg cgacctgccg gtgatgcgcg accccgacgg ttacatctac
    10561 ttcaaggagg aggtcggcgg gctgctgatg ggcggcttcg agcccgaggc caagccgtgg
    10621 aacaaggaca tcattcccga cgatttcgag ttcggcatgc tgccggacga ctgggaccag
    10681 ttccagatcc tgatggacaa tgcgctgatc cgcgtgccgg cgctggagaa gaccggcgtc
    10741 aagacgttca tgaacggccc ggagagcttt acgcccgacc tcaactacat cctgggcgag
    10801 gcgccgcagc taaagggctt tttcgtcggc gccgggttca actcgatggg catcgccagc
    10861 tccggcggcg ccggcatggc gctggccgaa tggatcgtgg ccggcgagcc gacgctcgac
    10921 ctgtggccgg tcgacatccg ccgctttgcc ggcttccacg gcaacgatgc ctggctgcgc
    10981 gcgcgcgtcg ccgagacgct tggcctgcac tacaagatgc cgtggccgca gcgcgagcat
    11041 gaaagcggcc ggccgttccg ccgctcgccg ctctacgacc ggctgaaagc gcgcggcgcc
    11101 tggttcggca acaagatggg ctgggagcgg cccaactggt tcgccggggt cggcaagacg
    11161 cccgacatgc agtacggctg gggccgcggc gcctggttcg atgcggtcgc atcagagcat
    11221 cgcgccacgc gcgaggacgt gaccgtggtc gacgagacct cgttcggcaa gatcctggtg
    11281 cagggccgcg acgccgaagc cgcgctgcag cggctggcgg ccaacgacgt cgccgtgccg
    11341 gtcgggcgca cggtctatac cggcatttta aacgagcggg gcaccttcga gagtgacctg
    11401 acgatcgcgc ggctggcgcg cgacaagttc ctgatcatca ccggttcggc acagccggtg
    11461 cgcgacatgg actggatcgg caagcacatc gcctccgcgc acgtcacctt ggcggacgtg
    11521 acctcgggct ggaccgtgct gtcgctgatg gggccgaaga gccgcgcgct gctgcacaag
    11581 gtgagccgcg ccgacttctc caacgagggc tttgccttcg ccaccatccg cgaagtcggc
    11641 gtcggccacg ccacggtgct cgcttcgcgc cgtacctaca tgggcgagct gggctgggag
    11701 ctctacgtcc cggtcgagtt cgccgtcacg gtgttcgaaa ccctgcacga ggctggcgca
    11761 gagctcggcc tgcgcgatgc gggctactat gccgtcgaga ccttgcgtct ggagaagggc
    11821 taccgcgcct ggggtcgcga gctcacgccc gacgacaccc ccttccaggc gggtctcggc
    11881 tgggccgtga agctcgacaa gccgggcggc ttcatcgggc aaaaggcgct ggtcgaggcg
    11941 aaggccaagc cgctggcacg ccgcctggtg tcggtggtgg tggcggacag cgagcctctg
    12001 ttgtggggcg gcgagacctt gctgcgcgac ggccggccgg tcggcgacct cacctcggcg
    12061 ggctacggcc acacggtggg ggcgtcggtc ggcctgggct acgtcagacg cgaggacggt
    12121 gcgccaatcg atgcggcgtg gctggaaagc ggccggttcg aggtcgactt ggccggcacg
    12181 cggctcaagt caaaggtctc gctgcgctgc ccctacgatc ccgccggcgc gcgcatcaag
    12241 ggctgagcgg tcttgagccg cgtgtcggcg agctcgccgg ccgcctcgag gatcggatag
    12301 gccaccgaag cgaggtggcc gttgatgcgc ttgaggtcgc ggatcacgtc catgtggatc
    12361 gagctggtct cgatcgattc cggccggcct tcgcgcaggc gggcgaagtg gctgtcggcc
    12421 gccttggatt cagcctcgcg catggcagtc ttctccgcca ccagccggcg cgccagcgca
    12481 atgtcgcgcg tggtgaagac gttcagcgcc agcttcaagt tctccagcac gcgggcatgg
    12541 aaggcgcgca gctcggccat gccttcgggc gaaaaggcgt agcggttgcg gatcttcttg
    12601 gcggcgagct ccatcaggtt cttgtcgacg atgtcgccga tgtgctcgag gttggtggtg
    12661 aaggtcagga tctcgacata gcgccggccg tcctcctcgc cgagctccgt gcgcgacgtc
    12721 tggatgagat agagcttgat cgcctcgtag agccggtcga cggcgtcgtc ggcggcttcg
    12781 atcgccttca ccgccttggg atcgttgcgc tcgaacacgt cgatggtctg gcgcagcatg
    12841 tcggccacgc gatcgccgag attgagcgtc tcgcgcaacg cgcagcccag cgcctcggtc
    12901 ggcgaatcga gcacgttggg atcgaggtgg cgcggcttgc cgggatcgtc gaccgcgggc
    12961 ttcgccggca agaggcggcg gcacgcccag gcgacaacgt cgaccagcgg caggaagacc
    13021 agcgccgcca ggacgttgaa caatgtatgg aagttgaccg gcaggcgcgt cgccgatgga
    13081 tcgatcagcg acagccactc gaccgccggg ccgaggaagg gcagcagcgc cacgccgacg
    13141 atggcccgcg tcatcaggtt ggcgagcggc acgcggcgcg cgtcgacgtc ggcgccggac
    13201 tgcgccatgt agggcgccag cgccccgccg atattggcgc cgatcaccag ggccagcgcg
    13261 agtttgggct cgatcaggcc gccgccggcg aacgacatga ccagcagcac cgtcgacagg
    13321 ctcgaatgga cgaaccaggt ggcgagcgtg ccgacgacga cggcgatgac gtactcgtcc
    13381 tgcaggccct gcagcagcgc catgaaggcc ggtgcaccgc gcagcggctg ggtggcgagc
    13441 gccagcagtt tcagcgacag cagcatcagg ccgagcccga tggcgacgcg gccgagatgg
    13501 cgcggcttgt cggactgagc tgacaggaag gcgatgacgc cggcgccgat caacagcggc
    13561 gagacccaac ccaggtcgaa cgacaggatc tgggccgcga tggtggtgcc gatatcggcg
    13621 cccagcatga tggcgaaggc gatcgacagc gggatcaggc cgcggccggc gaaggaggac
    13681 accagcaacg acgtggccgt gctcgactgc agcaggccgg tgacggcgat accgcccagg
    13741 aaggcggtga agcggttgcg cgagcaggcg gcgatggcgc ggcgcagggc ggcgccgaaa
    13801 gcgcgcgtca gtcccgtgcg gaccatgcgc acgccccaca gcagcagcgc cacgctgccc
    13861 agcacgttca ggatcgtctc gacgccatgc atgatggccg gacactacgc ctggcaagcc
    13921 gcgggttaaa gttttttgac tggtccgtta cgcaccctgc cggctcgcct cttccatgaa
    13981 ggcccgcacc agcgccacgc ggcggcgctc ctgcaggctc acggcatact cggcgacgtc
    14041 gaggtcggcg tcggtgacaa gaatgcgtcg aaagcgccgg tcgtcgccca gttcgctggc
    14101 gaataccgcg ccgatgccga agcccgccgc gaccgcctca cgcacgcctt cgcgcgtctg
    14161 cacttcgacg atggcgccgg gctggatatc ggcggcggcc atcgcctgct cgagcacctc
    14221 gcgggtgatc gagccgcgct cgcgcaacac cagctcctgg ccggcgagcg cgcccagcgg
    14281 cacgcggccg cgcttggcca gcgcatgacg cgccgggacg aacagcacca gccggtcggt
    14341 gcgcaggcgc acggcgtgca gccgtgggtc cgacacgctc ttggccatca ccgcaacgtc
    14401 ggcctcatgg cgcagcaggc gctccagcac gacggcggaa ttgtcgatcg acagcgtgaa
    14461 ggtgagcccg tcggcgcgcc ggcgcagcgc cgccatgatc ggcacgacgt ggtgcgccga
    14521 atccgccgcg atccgcagat gtccgcgcgt cagcgcctgc tcgcccgcca gcaacgcccg
    14581 cgcctcgtcc tgcagggcga acagtcgggt cgtgacgcca tggagctgcc gcccgctttg
    14641 ggttggcgtg acgctgcggc cgcgccggtc gaacaggcgc acgccgtagg ccttctccaa
    14701 tgcagtgacc tggcccgaga gattgggctg gctcaggccg gaggcgcggg cggcggcgga
    14761 gaacgagccc gattcggcca cgagatggaa ggcgcggagc tggctgggtg tcatatcagt
    14821 ttcatcgata ggtcgcatag agtttatata ctggacggat agataacgcg agccgatcat
    14881 ccgcccatgc aaccgacgac gcccgccgct tccgaaaccg gcgatccgct gctgctgacg
    14941 cctgggccac tcaccacctc ggccagcgtg aagcaggcca tggtccacga ctggggctcg
    15001 cgcgatgccg gattcctgcg cgtcaacagg atggtgttgg acaagatcgt cgagctggcg
    15061 ggcggtcagg gctcgcatgt gaccgtcccg gtgcagggct cgggcacctt cgccgtcgag
    15121 gcgatgatca cctcgttcgt gcccaagtcc ggcaagctct tggtgctgat caacggcgcc
    15181 tacggccagc gtgcgcgcag gatcgtcgag atcgccggcc gcgcggcggc gtcgctcgag
    15241 atgccggagg acatgccgcc cgatttgcct ctgctggaga ggatgctggc cgaggacaaa
    15301 gcgatcaccc acgtcttcgc cgtccattgc gagaccacct cgggcatcct caatcccatt
    15361 gtcgaaatcg cggcgatcgt ggccagccac cgccgccgcc tgctggtcga ttccatgagc
    15421 gccttcggcg cgctcccgat cgacgcccgc gagatccgct acgacgccct ggcggcctct
    15481 tccaacaaat gcctggaggg cgtgccgggc ctgggcttcg tgatctgccg caacgaggcg
    15541 ctggaggaat gcgaaggcaa cgcgaccacc ctggtgctcg acctgttcga ccaggccgag
    15601 gcgttcgcgc gcacgggcca gtaccgctat acgccgccca tccatgtcat cgtggcgctg
    15661 ggcaaggcaa tcgaggagca tgccgccgaa ggcggcgttt taggccgcgg ccggcgctac
    15721 cgcgacaatg ccaaggtgct gatcgacggc atgcgcgcca tgggctttcg caccctgctg
    15781 cccgatcgcc tgcaggcgcc gatcatcgtc accttccaca tgccgaccga cccgaagttc
    15841 gtcttccagc gcttctatga cgggctaaag gatcgcggct acgtgatcta tcccggcaag
    15901 ctcacggtcg cggactcctt ccgcatgggc tgcatcggcc gcctttatcc cgagcatatg
    15961 aagggtgcct tggcggccgt gcgcgaggtc ctggacgaaa tgcgggtcag caacggcggc
    16021 ccggcgctgg cggccgagta gggggaacga tggcacccga cagtctcaac accgcgggcg
    16081 gcgacgtcac cgtcaacggc cgtcgctacc gcctgcccaa gcagcccacc gtcgtggtct
    16141 gcgtcgacgg ctcggagccc ggctacatcg agcgcgccgt cgaggccggc cgcgcgccgt
    16201 ggttcggcaa ggtgcttacc cagggcacca gcctgacggc cgactgcgtc gtgcccagct
    16261 tcaccaatcc caacaacctc tccatcgtta ccggccagcc gcctgccgtg cacggcattt
    16321 gcggcaacta cttcctcgat cccgacagcg gcgaagaggt gatgatgaac gacccgaagt
    16381 tcctgcgggt cgagacgctg ttcccgtcgt tccagcgcgc cggctgccgc atcgccgtcg
    16441 tcaccgccaa ggacaagctg cgcgggcttt tgggcaaagg gctggagctg ggcgccggca
    16501 aggcttttag cttctcctcg gagaaatccg acaaggcgac cttggcggag aacggcatcg
    16561 acaaggtcaa cgacttggtc ggcatggccg tgccggacgt ctatagcgcc ggcctgtcgg
    16621 agttcgtgtt cgccgccggc gtaaaaatca tggaacggga ccggccacag atcatgtatc
    16681 tctcgaccac cgactacatc cagcacaagc acgcgcccgg cacgccggtc gccaacgatt
    16741 tttacgccat gatggaccgc tacatggcca agctggacgc gctcggctgc accatcgtgc
    16801 tgacgg
//
LOCUS       DASWGA010000786         4006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1991793, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000786 DASWGA010000000
VERSION     DASWGA010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4006
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1991793"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VF991_18335"
     CDS             <1..564
                     /locus_tag="VF991_18335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6537 domain-containing protein"
                     /protein_id="HEX9558457.1"
                     /translation="AKAEKEKAPGRRGLAEVVAKSLYKLMAYKDEYEVGRLYSDGEFL
                     KKLGGQFEGDYKLTFHLAPPLFAKRDPLSGELKKREYGAWVMPLFGFLASLKRLRGTR
                     FDVFGYTAERRMERRLIGEYEATIETLLATLDQNNHALAVQIAALPETMRGFGHVKEK
                     NVKAAKEREAGLLASYRNPALQSVAAE"
     gene            complement(856..1455)
                     /locus_tag="VF991_18340"
     CDS             complement(856..1455)
                     /locus_tag="VF991_18340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEX9558458.1"
                     /translation="MPGSASPAASLAGRFLVAAPSMPDERFQKSVVFICKHDDDGALG
                     IIVNNKVEDLPLGQVYKQLGIEVPETTAERAVLFGGPVETSRGLVLHSADYKREETLL
                     IDGGMALTASLEILKDMAGGSGPKEAWLALGHSGWAPGQLDREMQDNAWLVVDGDAAL
                     VFDADFAAKWQRALDRLGGKTGAGGRIDPASFSHQSGRA"
     gene            1612..2094
                     /locus_tag="VF991_18345"
     CDS             1612..2094
                     /locus_tag="VF991_18345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX9558459.1"
                     /translation="MAKVGDKVPSATLRMLGPEGPKAVTTEELFAPGKKVVAFALPGA
                     FTPTCSAKHVPGFVAEAEALKKKGVDTIACISVNDAFVMGAWGKDQKAGDKVMMLGDG
                     NGEFTQAMGLTMDGSKFGLGTRSQRYAMIVENGVIKDLFVEKPGAFEVSSAENVLKHL
                     "
     gene            complement(2162..2923)
                     /locus_tag="VF991_18350"
     CDS             complement(2162..2923)
                     /locus_tag="VF991_18350"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9558460.1"
                     /translation="MSSSSRVILITGASSGIGAATARALAAPDAAIVLHARNNRAGAD
                     KVAGLVRDAGGEALVLAGDLAVAGTARRLVEETAQKFGRLDVVVSNAGFADRRLVGEL
                     DRAGWDASLGAMTSAFFELASTAKPWLVKAGAAGRMVGVSSFVAHAYARGLPSFPASA
                     AAKAGMEALARALAVEIASSGGTVNCVAPGLIEKDADAHAAISRDRMAQMSALVPMGR
                     YGKPAEVAAVIAFLCSPAASYVTGQTIHVNGGVTL"
     gene            complement(2951..>4006)
                     /locus_tag="VF991_18355"
     CDS             complement(2951..>4006)
                     /locus_tag="VF991_18355"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HEX9558461.1"
                     /translation="WLAAAVLALAVIDFGWGVGSYALRQYTIGVMSLLPPDKVEPARF
                     QWHALLQAVPVPSLQFTSATGLSISHTSEGTRGKDPAPGSLQGRTVVATFGGSTTYDI
                     GAAEGDTWSDRLGETLGPDRFFIVNHGVPGYTTVEHLIQTVFYQIKFGKQPRCALYYV
                     GWNDLRNAHIADLDSAYADFHLPSQVDSLKTRRVGGSHVTISPLLTMLMRLVSANVDT
                     VRYFADPYGKEPVTGDDPALDALYERNIRAISAINRQRGVVTIWVGQLLNRESLLGDG
                     RYGWLPLVRDRDLWPMQQKFNALLSRTAKELGDVYVDVPAGAFTNADFVDNGHFSGPG
                     ARRFVDYLAPAVREACR"
BASE COUNT          738 a         1292 c         1375 g          601 t
ORIGIN      
        1 gccaaggccg agaaggaaaa ggcgccgggc cggcgcgggc tcgccgaggt ggtcgccaag
       61 tcgctctaca agctgatggc ctacaaggac gagtacgagg tcgggcggct ctacagcgac
      121 ggcgagttcc tgaagaagct cggcggccag ttcgaaggcg actacaagct caccttccac
      181 ctggcgccgc cgctgttcgc caagcgcgat ccgctaagcg gcgagctcaa gaagcgtgaa
      241 tatggcgcct gggtgatgcc gctgttcggc ttcctcgcct cgctgaagcg cctgcgcggc
      301 acgcggttcg atgtcttcgg ctacaccgcg gagcggcgca tggagcgtcg gctgatcggc
      361 gaatacgagg ccaccatcga aaccttgctg gccacgctcg accagaacaa tcatgcactg
      421 gccgtccaga tcgccgcgct gcccgagacg atgcgcggct tcggccacgt caaggaaaag
      481 aacgtgaagg cggccaagga gcgcgaagcc ggcctgctgg ccagctaccg caatccggcg
      541 ctgcagtcgg tcgccgccga atagcgcgcc gaaaacgaag cgggacgccc gcgcttccat
      601 tggggttggg gaaggaagcg aaggcgtccc gggtacacgc gccgtccgcg aagggaggtt
      661 ggcggcggcg caattcggct ataggccgat ttgcctgggg aaagtaagca caatctgcgg
      721 tcgcaaatgc acacctgatg gcatcccgac gaaggcccga agggccgcac ggagggaaat
      781 tttctctacg ccacggttgt cgaggcaaag tctgtcgact gcgctgtcct ccggcggctt
      841 cgctcgggac aggcgtcagg cgcgtccgga ctgatgcgaa aaggacgcgg ggtcgatccg
      901 tccgccggcg ccggtcttgc cgcccagccg atcgagggcg cgctgccatt tggcggcaaa
      961 atcggcgtcg aataccagag cagcatcgcc gtcgaccacc agccacgcat tgtcctgcat
     1021 ctcgcggtcg agctggccgg gcgcccagcc cgaatggccg agagccagcc aggcctcctt
     1081 gggtccgctg ccgccggcca tgtccttgag gatctcgagc gaagcggtga gcgccatgcc
     1141 gccgtcgatc agcagagtct cctcgcgctt gtagtcggcc gagtgcagca ccaggccgcg
     1201 cgaggtttcg acggggccgc cgaacagcac cgcccgctcg gccgtcgtct ccggcacctc
     1261 gatgccgagc tgcttgtaga cttggccgag cggcaggtcc tcgaccttgt tgttgacgat
     1321 gatgcccaac gcgccgtcgt cgtcgtgctt gcaaatgaac acgacgctct tctggaagcg
     1381 ttcgtccggc atggacggcg cggcgaccag gaagcggccg gccaacgaag cggcgggaga
     1441 ggctgacccg ggcatgatgt gatgatcctc caaatccatg gggattgtcc ggctaaagat
     1501 caagccggaa gatcgagcga gggagggcca atggacaaat tgtgacccct cgcctagggt
     1561 ccgccggttc gtgagcctgc ccgaggcagg cggcaattgg aggagcaaat aatggcgaaa
     1621 gtcggcgaca aggtgcccag cgccacgttg cgcatgctgg gcccggaagg acccaaagcg
     1681 gtcaccaccg aagaactctt cgcgcccggc aagaaggttg tggccttcgc cctgccgggc
     1741 gccttcacac ccacttgttc agcaaagcac gtgcccgggt tcgtggccga agcagaggcg
     1801 ctgaagaaaa agggtgtcga caccattgcc tgcatttccg tcaatgacgc gttcgtgatg
     1861 ggtgcctggg gcaaggacca gaaggccggc gacaaggtca tgatgctggg cgacggcaac
     1921 ggcgagttca cccaggcgat ggggctgacc atggacggct ccaagttcgg gctgggcacg
     1981 cgcagccagc gctatgccat gatcgtcgag aacggcgtca tcaaggacct gttcgtcgag
     2041 aagccgggcg ccttcgaggt gtcgtcggcc gagaacgtgc taaaacacct ctagccgctt
     2101 ttcaagcgcg gccaggatcg acggcggggc aaaggccccg ccgtttcatt tggcagtcgc
     2161 gctacagcgt cacgccacca ttcacgtgga tcgtctggcc ggtgacgtag ctcgccgccg
     2221 gcgagcacag gaaggcgatc acggccgcca cctccgccgg cttgccgtaa cggcccatcg
     2281 gcaccagcgc gctcatctgc gccatgcggt cgcgcgaaat cgcggcgtgc gcatcggcat
     2341 ccttctcgat caggccgggc gccacgcaat tgaccgtgcc gcccgaagag gcgatctcga
     2401 ccgccaaggc acgcgccagc gcttccatgc ccgccttggc cgcggccgac gcgggaaagc
     2461 tcggcagccc gcgcgcatag gcgtgggcca cgaacgacga cacgccgacc atgcggcctg
     2521 cggcgcccgc cttgaccagc cacggcttgg ccgtgctggc gagctcgaag aaggccgagg
     2581 tcatggcgcc caggctcgca tcccagccgg cgcggtcgag ctcgcccacc aggcggcggt
     2641 cggcgaagcc cgcgttgctc accacgacgt cgagccggcc gaatttttgc gcggtctcct
     2701 cgaccagtcg ccgcgccgtg cccgccacgg cgagatcgcc cgcgaggacc agcgcctcac
     2761 caccggcgtc gcgcaccagg cccgcaacct tgtcggcgcc ggctcggttg ttgcgagcat
     2821 ggagcacgat cgcggcatcg ggcgcggcga gcgcccgtgc ggtcgcagcg ccgatgccgg
     2881 aagaggcgcc ggtgatcagg atgactcgag aagaagagga catgggtcga agcagtaaaa
     2941 tgccgcgcgc ctagcggcaa gcctcacgca cggccggcgc caggtaatcc acgaagcgcc
     3001 gcgctcccgg cccggagaaa tgcccgttgt cgacgaagtc ggcattggtg aaggcgccgg
     3061 ccggcacgtc aacatagaca tcgcccagct ccttcgccgt gcgggacagc aaagcattga
     3121 acttttgctg catcggccag aggtcgcggt cgcgtaccag cggcagccag ccatagcggc
     3181 cgtcgcctaa aaggctctcg cggttgagga gctggccgac ccagatcgtg acgacgccgc
     3241 gttggcggtt aatcgccgag atcgcgcgga tattgcgctc gtagagcgcg tcgagcgccg
     3301 gatcgtctcc tgtcaccggc tccttgccgt aggggtcggc gaaatagcgg acggtgtcga
     3361 cgttggcgct gaccaggcgc atcagcatgg tgagcagcgg cgagatcgtg acgtgcgagc
     3421 cgccgacccg gcgagtcttg agcgagtcga cctggctcgg caggtggaag tcggcatagg
     3481 cggaatcgag atcggcgatg tgcgcgttgc gcaagtcgtt ccagccgaca tagtagagcg
     3541 cgcagcgcgg ctgcttgccg aacttgatct gatagaacac cgtctggatc agatgctcga
     3601 cggtggtgta gcccggcacg ccgtgattga cgatgaagaa ccgatcggga ccaagcgtct
     3661 cgcccagtcg atcgctccag gtgtcgcctt cggcggcgcc gatatcgtag gtcgtcgagc
     3721 cgccgaacgt cgccacgacc gtgcggccct ggaggctgcc cggcgccggg tcctttccac
     3781 gcgttccctc cgaggtgtgg ctgatcgaga ggccggtggc gctggtgaac tgcagcgagg
     3841 ggacaggaac ggcttgcagc agggcatgcc attgaaagcg cgcgggctcg accttgtcgg
     3901 gaggcagaag ggacatgacg ccgatcgtgt actggcgcag ggcgtaggaa ccgacgcccc
     3961 agccgaagtc gatcaccgcg agcgccagca cggcggcggc cagcca
//
LOCUS       DASWGA010000787        15592 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_463716, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000787 DASWGA010000000
VERSION     DASWGA010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 15592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15592
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463716"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VF991_18360"
     CDS             <1..466
                     /locus_tag="VF991_18360"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9558462.1"
                     /translation="SRGGSTWFCNMHSVYEALPQAVRQRIDGLRAIHGYDTPRARNRP
                     SPRTPQEIAETPDVEHPLVRTHPETGRKALYLNPNRLDHIVGLERAESDALLDELADE
                     ARKPQHHFGHVWQVGDIVVWDNRATMHRVMIDYPVGEKRIMQRVLIEGDRPV"
     gene            complement(620..1813)
                     /locus_tag="VF991_18365"
     CDS             complement(620..1813)
                     /locus_tag="VF991_18365"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9558463.1"
                     /translation="MSGGPLAGVRVVDLTTVVVGPICSRTLADYGADVIKVEAPGGDL
                     LRTMAEGNRNPGMSGKFINFNRNKRSIVLDLKKPQGHAALLRLIARADVFVSNVRPEG
                     LARAGLDHASLAKDNPKLIHCSILAFGRGGRYFNRPAYDPVIQSLSGVAGTIARATGE
                     PRFVPMVMSDHTSGLIAAQCIGFALYRREKTGKGEAIDVPMLENMASFVSSEHLGAAT
                     FDPAVGPTGDGRLLSPNYRPLPTKDGYITIRPNTNPQAFAFFDAIGRPELKTDPRFNS
                     AAARTKNAPAYFEVQKEGLDQKTTDEWVELFDKLDVPAARYNSIDDLLTDPHLKDVGF
                     YKEEDHPTEGRLRRTRLANIFSGGAREDETHAPRLGEHTREVLAEAGYAPGEIDDLLA
                     AGAAH"
     gene            complement(1810..2655)
                     /locus_tag="VF991_18370"
     CDS             complement(1810..2655)
                     /locus_tag="VF991_18370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558464.1"
                     /translation="MTELRPWIGRVRIVEDDIGLMAVRRAAGAFDMDPESFKRGSELP
                     PHWFTIFFAETVRQREVGPDGHPNKGIVLPPIPMPRRMGAGRRVKIMGRLRAGEPALK
                     KAEVADIVPKSGRSGDIFVLTMRHTIEQGGKIIAVDTFDAIYRPAVPPGQKTTATVPT
                     SARTDHAWSDKTALTNALNFRYSALTWNAHRIHYDGDYTRSEEGYPALVSNGGLSMHL
                     MVDAALRHTKGTLTGYTARLVHPLWVGDLIDVRGEEQNDGKLKIWAADKNGVLCGEMD
                     LEFAA"
     gene            complement(2870..4279)
                     /gene="glnA"
                     /locus_tag="VF991_18375"
     CDS             complement(2870..4279)
                     /gene="glnA"
                     /locus_tag="VF991_18375"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018094964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEX9558465.1"
                     /translation="MMDAKQVLAMIKEKDVKFVDFRFTDPRGKWQHTARMASATDEGS
                     FVDGVMFDGSSIAGWKAINDSDMILMPDPATAVLDPFTAQTTLIVNCDVVEPSTGQLY
                     ARCPRSTAKRAEAFMKSSGIGDTAVFGPELEFFVFDDVRFDVQMNGSFYKLSHSESPW
                     NTGAEFEGGNMGHRPGIKGGYFPVQPVDSMNDLRAEMMSVCADMGLTMEIHHHEVAPS
                     QNELGFRFDTLVKTADNVQKYKYTLHNVAHSYGKTLTFMPKPLYGDNGSGMHTHQSVW
                     KDNKPLFAGSGYADLSEAALYYIGGIIKHAKALNAFCNASTNSYKRVVPGFEAPVLLA
                     YSSRNRSASCRIPYASSPKGKRVEVRFPDSSANPYLAFAAMLMAGIDGIQNKIHPGDP
                     MDKNLYDLPPEELSKVPTVAGSLREALNCLDGDRTFLTKGGVFTDDQIDAYMELKWEE
                     VYNWEHQPAPIEYKMYYSV"
     gene            complement(4333..4671)
                     /locus_tag="VF991_18380"
     CDS             complement(4333..4671)
                     /locus_tag="VF991_18380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX9558466.1"
                     /translation="MKKIEAIIKPFKLDEVKDALNQIGLKGITVLEAKGFGRQKGHTE
                     LYRGAEYVVDFLPKVKIELIIEDEMVEKAVEAIRSSAHTGRIGDGKIFVSSIDDAIRI
                     RTGERGDAAV"
     gene            4871..6037
                     /locus_tag="VF991_18385"
     CDS             4871..6037
                     /locus_tag="VF991_18385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HEX9558467.1"
                     /translation="MKPANSLMSGLGTTVFEVMSALAREHQSVNLGQGFPDDKGPDAV
                     RSAAADYLMNGHNQYPPMMGLPELRQAVAEHARRFQGLEADWQSEVLVTSGATEALGD
                     CLFGLIESGDEVVLIEPLYDSYLPIVRRAGGIPKLVRLEPPTWRLPREELAAAFSART
                     KLILFNTPMNPCSKVFDREELDFIAGLCLEHDVYAVCDEVYEHIIFDDRRHLSIMTLP
                     GMRERTARIGSAGKSFSLTGWKVGYVTAAPELMKSIAKTHQFMTFTTPPNLQWGAATG
                     LRLADDYFSTLAADMQRKRDRLGNALSDIGFEVLPAHGTYFVTTDFRPLGFNGTDEDF
                     CRHITVEAGVTAVPVSAFYDDPARAPRHFARFCFCKHDATLDSAIDRLGRHFLR"
     gene            6292..6849
                     /locus_tag="VF991_18390"
     CDS             6292..6849
                     /locus_tag="VF991_18390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558468.1"
                     /translation="MIIEAYLALLRENPVVPLPTAARIAKRAGYSVRSVFERFPDLGK
                     LRLAATDYALAQAAALAPPRNIDGDRPTRIRSQVETRAGTCERGVALWRVLIASVAED
                     DALKDRVRISRERTIERLEIMYRPELSTLSDQEHKHMLIALEAITDIESWARMRELHG
                     LSFDRACDVWISAIDRMLPPTPQAA"
     gene            6957..7535
                     /locus_tag="VF991_18395"
     CDS             6957..7535
                     /locus_tag="VF991_18395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9558469.1"
                     /translation="MRSQRTQQLIIEAYLALAGENSPQVPTAAQIAERAGYSVRSVFE
                     RFPDIHSLQVAAVDHALAQIAAPLPCHDAGADRETRIRSQVEGRGRTCERWLPLWRSL
                     VVNQGVSTELRQRVASLRERVVERMESIYAPELSPLPAVERRHLLIVLEALTDVESWA
                     RMKEFFGLSFEEACAAWVQAIDRLLPPTPAGS"
     gene            7535..8188
                     /locus_tag="VF991_18400"
     CDS             7535..8188
                     /locus_tag="VF991_18400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558470.1"
                     /translation="MTAADDTSTGNSSPAAAAPVPRIDGRHLRSARTKQVIIEAYLAL
                     LRENPQVPTAARIAERAGYSVRSVFERFADLHALRVAATDYALARGNAQAAAGDVAGN
                     REARLKAHVETRAGICEQWLPLWRALNANQGDSAELKSRILLVRQAILKRIELMYRTE
                     LATLEEREHRQILIAIETLVDFESWAHMREHKGLSFAEACAVWIRAIDRLLPPTPVS"
     gene            8244..8320
                     /locus_tag="VF991_18405"
     tRNA            8244..8320
                     /locus_tag="VF991_18405"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8278..8280,aa:His,seq:gtg)
     gene            8335..9846
                     /locus_tag="VF991_18410"
     CDS             8335..9846
                     /locus_tag="VF991_18410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEX9558471.1"
                     /translation="MVADPTVRDLAPHDDFVLLSCAQMAKADAAAIAGGIAGSALMEA
                     AGRAVAEAAVGRYRPRPVVVLCGPGNNGGDGFVAARHLEAAGWPVRVGLLGPRDALKG
                     DAAWAAQSWRGPVEPLSLGLLDGRPLVVDALFGAGLTRAIDGVAGEAIDRINREALAV
                     IAVDVPSGLHGDSGEVMGRAPCAERTVTFFRAKPGHYSLEGLRRCGVLGVADIGIPLA
                     MLKEIAPLLWLNHPSLWRQHLRRDGLADHKYARGHLTILGGAAATGAARLAALAGRRA
                     GAGLATIATPRVAMAIFQAAEPGNLVSESEDGAGFARLLEDERRTAALIGPGSGLNER
                     TRASVLAALTTGRAVVLDADAITVFAQAPKSLFDAVKGPALLTPHEGEFRRLFPDLAK
                     LPGKVERAREAARRSGATVLLKGPDTVIAAPDGRAVINIHAPASLATAGSGDVLSGIA
                     GGLMAQGLAPLAAGAAAAWLHGESALRFGRPGLIAEDLVDCLPDALQTIVKPD"
     gene            9984..10068
                     /locus_tag="VF991_18415"
     tRNA            9984..10068
                     /locus_tag="VF991_18415"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10018..10020,aa:Leu,seq:tag)
     gene            10096..11454
                     /gene="tig"
                     /locus_tag="VF991_18420"
     CDS             10096..11454
                     /gene="tig"
                     /locus_tag="VF991_18420"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEX9558472.1"
                     /translation="MTELAADGLKRQFKIVVPAGDLSAKVDERLVEMARTAQMPGFRP
                     GKVPVGLLKKQYGQALFGEAVEQAVNSSTAKAIEDRGLKPALQPRVDLKQLEEGKDVE
                     FEVAIEVLPEIGKLDFSDIELERLKAVVPDKDVDEAIERIAKANREQKPVDPPRPAQK
                     GDAIKLDFVGSVDGTEFPGGAAQDYTLELGSASFIPGFEDQLIGAEVGKPVDVKVTFP
                     ADYGNTELAGKEAVFKCTIKEIHEFVDKPADDELAKKNNFENLEAMRKAVGERIGQDY
                     ARISRSMIKRQLLDKLAEAHKFAVPEGLVEGEFKAIWQRIEEAKKAGEKLEDDEDKMR
                     QEYRDIAERRVRLGLLLADVGRSNSIEVTPEELNQAVMREAMRYPGQERQVLEFYGKN
                     AELKEQLRAPIFEEKTVDFILELAKVADKPVTPEELLKAARETEEKEEKDDEKPAEAA
                     TN"
     gene            11543..12190
                     /locus_tag="VF991_18425"
     CDS             11543..12190
                     /locus_tag="VF991_18425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEX9558473.1"
                     /translation="MRRDRDPLEVYNNYYVPMVVEQSARGERGYDIWSRLLKERIIFM
                     NGPIEDNVAGLVCAQLLYLEAENPTKDISFYINSPGGVVTSGMAIYDTMQYVRPQIST
                     LVFGQAASAGSLLLMAGAKGKRFALPNARIMIHQPSGGAQGQATDIEIHAREILSTRA
                     RLNQMYVVHTGRTIEEIERAMERDKFFSPPEAKEFGLIDDVLEKRPTPTIQAAAS"
     gene            12333..13604
                     /gene="clpX"
                     /locus_tag="VF991_18430"
     CDS             12333..13604
                     /gene="clpX"
                     /locus_tag="VF991_18430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEX9558474.1"
                     /translation="MPAAKSGGDSRNTLYCSFCGKSQHEVRKLIAGPTVFICDECVEL
                     CMDIIREESKTTLVKSKDGVPSPKEIRQILDDYVIGQDQAKRILAVAVHNHYKRLSHG
                     GKANDVEIAKSNIMLIGPTGCGKTLLAQTLARMLDVPFTMADATTLTEAGYVGEDVEN
                     IILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT
                     VASVPPQGGRKHPQQEFLQVDTTNILFICGGAFSGLDKIISMRRQGTSIGFGAEVRGP
                     EDRRTGEVLRDLEPEDLLKYGLIPEFVGRLPVVATLEDLDEGALIEILTRPKNALLKQ
                     YQRLFDMESVKLKFSDDALRAVAQKAILRKTGARGLRSIMETVLLDTMYDLPSLDGVE
                     EVVINREVIEGRAQPLYVHGERKEGIAAAPA"
     gene            13779..>15592
                     /gene="lon"
                     /locus_tag="VF991_18435"
     CDS             13779..>15592
                     /gene="lon"
                     /locus_tag="VF991_18435"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014285958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEX9558475.1"
                     /translation="MNAPTQGTVYPVLPLRDIVVFPGMIVPLFVGREKSVKALEEVMK
                     DDKQILLIAQKNASQDDPGPDDIYTIGTLGTVLQLLKLPDDTVKVLVEGGRRVKIVGY
                     TGKTEFFEANAIDMEETAGESAELQAAARTVVSEFENYVKLNKKVPPEVVVSINKIEE
                     PAKLADTISAHLALKVAEKQQLLELDAVSKRLERILGLMEGEIGVLQVEKKIRNRVKR
                     QMEKTQREYYLNEQMKAIQKELGETEDGRDEISELEKRIKKTRFSKEAREKANNELKK
                     LRTMSPMSAEATVVRNYLDWLLSIPWRKPTKIIKDLKYAEDILNADHHGLEKVKERIL
                     EYLAVQQRVDKMKGPILCLVGPPGVGKTSLGKSVAKATGRNFVRMSLGGVRDEAEIRG
                     HRRTYIGSLPGKVLQSMKKAKSSNPLFLLDEVDKLGADFRGDPSSALLEVLDPEQNST
                     FNDHYLEVDYDLSNVMFITTANSLRMAQPLMDRMEIIRLAGYTEDEKVAIARKHLIMK
                     QIEANGLREGELDIHDDAVRDLVRYYTREAGVRNLEREIANLARKATKEILMKGVSKV
                     KIRAKNLDKYAGVRRFRYGEAELVDLVGITTGLAWTEVG"
BASE COUNT         2762 a         4946 c         5250 g         2634 t
ORIGIN      
        1 cagtcgcggc gggtcgacct ggttctgcaa catgcattcg gtttacgagg cattgcccca
       61 agccgtgcgc cagcgcatcg acggcctgcg ggccatccac ggctacgaca cgccgcgggc
      121 gcgcaaccgg ccttcgccgc gcacgccgca ggagatcgcc gagacgcccg atgtcgagca
      181 tccgctggtg cgcacccatc cggaaaccgg tcgcaaggcg ctttatctca atcccaaccg
      241 cctcgaccat attgtcggac tcgagcgggc ggagagcgac gctctgctcg acgagctggc
      301 cgacgaggcg cgcaagccgc agcatcattt cggccatgtc tggcaggtcg gcgacatcgt
      361 ggtgtgggac aaccgcgcca ccatgcatcg cgtcatgatc gactacccgg tcggcgagaa
      421 acgcatcatg caacgcgtgc tgatcgaagg ggataggccg gtctgatcca gactgcgcgg
      481 ctgcggcgtc ctgtcatgcg gagcgtagcg aagcatctca tggcagaagt ggcgatgaga
      541 tccttcgcta cgcttcagtg cggggactac cccgcgcgcg atgacaagaa aagcagccga
      601 tgccaaagtc tggacgggtt caatgggcgg cgccggcggc aagaaggtcg tcgatttcgc
      661 ccggcgcgta gccggcttcg gcgagcacct cgcgggtgtg ttcgcccagg cgcggggcgt
      721 gggtctcgtc ttcccgggcg ccgcctgaga aaatgttggc gagccgcgtg cgccgcagcc
      781 ggccttcagt cggatgatct tcttccttgt agaacccgac atccttgagg tgcggatcgg
      841 tcagcagatc gtcgatagaa ttgtagcggg cggccggcac gtcgagcttg tcgaacagct
      901 cgacccattc gtcggtcgtc ttctggtcga ggccttcctt ctggacctcg aaataggccg
      961 gggcattctt tgtccgggcc gccgcgctgt tgaagcgcgg atcggtcttg agctccggcc
     1021 ggccgatcgc gtcgaagaag gcgaaggcct gggggttggt gttgggccga atggtgatgt
     1081 agccgtcctt ggtcggcagc gggcgatagt tggggctgag cagccgcccg tcgccggtgg
     1141 gaccgactgc cggatcgaag gtggcggcgc cgagatgctc gctcgacacg aacgacgcca
     1201 tgttctcgag catcggcacg tcgatcgcct cgcccttgcc ggtcttctcg cggcgataca
     1261 gcgcgaagcc gatgcattgg gcggcgatga ggccgctggt gtgatcgctc atgaccatcg
     1321 gcacgaagcg cggctcgccg gtggcgcgcg cgatcgtgcc ggcgacaccc gacaggctct
     1381 ggatcacggg atcgtaggcc ggccggttga agtaacggcc gccgcggcca aaggcgagga
     1441 tcgagcagtg gatcagcttc ggattgtcct tggcgaggct tgcatggtcg aggccggcgc
     1501 gagccagtcc ctccggccgc acgttactca cgaagacatc ggcccgcgcg atgaggcgga
     1561 gcagggcggc atgaccctga ggcttcttga ggtccagcac gatcgagcgc ttgttgcggt
     1621 tgaagttgat gaacttgccc gacatgccgg ggttgcggtt gccctcggcc atggtgcgca
     1681 acagatcgcc gccgggcgcc tcgaccttga tgacgtcggc gccgtagtcg gcgagggtgc
     1741 ggctgcagat cggcccgacg acaacggtcg tcagatcgac cacgcggacg ccggcgagcg
     1801 ggccgccgct catgccgcga actccagatc catctcgccg cacagcacgc cgttcttgtc
     1861 ggccgcccag atttttagct tgccgtcgtt ctgttcctcg ccacgcacgt cgatcagatc
     1921 gccgacccac agcggatgga cgaggcgggc ggtatagccg gtgagggtgc ccttggtgtg
     1981 gcgcagggcg gcgtcgacca tgaggtgcat cgacaggccg ccgttggaga cgagggcagg
     2041 gtagccttcc tcgctacgtg tgtagtcgcc gtcataatgg atgcgatgcg cattccaggt
     2101 gagcgcggag tagcggaagt tgagtgcgtt ggtgagcgcg gtcttgtcgc tccaggcgtg
     2161 atcggtgcgg gcggacgtcg gcaccgtcgc cgtcgtcttc tggcccggcg gcaccgccgg
     2221 ccggtagatc gcgtcgaacg tgtcgacggc gatgatcttg ccgccttgct cgatggtgtg
     2281 gcgcatggtg agcacgaaga tgtcgcccga gcggccgctc ttggggacga tgtcggccac
     2341 ctcggccttc ttgagcgcgg gctcgccagc cctgaggcgg cccatgatct tcacgcggcg
     2401 gccggcgccc atgcggcgcg gcatggggat gggcggcagc acgatgccct tgttgggatg
     2461 gccgtcgggc ccgacctcgc gctggcgcac cgtctcggcg aagaagatcg tgaaccagtg
     2521 cggcggcagt tcgctgccgc gcttgaaact ttcgggatcc atgtcgaacg cgccggcggc
     2581 gcgccgcacc gccatcaggc cgatatcgtc ctcgacgatg cgcacccggc cgatccaagg
     2641 gcgcagttcc gtcatcgctt cgtccatcca gcctgccatg gcgctcgttc cccggttcga
     2701 tttaggcgca gccttgcacg caggcccgaa aagaagaagg gcccgccatg gcgggccctt
     2761 ccgattcgga attccagtca accagaaacc tgtcatcccg aggccgtagg ccgagggatc
     2821 tttgctgttg ccgtaaagat ccctcgctcc gctcgggatg acagatatat cagaccgagt
     2881 aatacatctt gtactcgatc ggcgccggct ggtgttccca gttgtagacc tcttcccact
     2941 tgagctccat gtaggcgtcg atctggtcgt cggtgaacac gccgcccttg gtgaggaagg
     3001 tgcggtcgcc gtcgaggcag ttcagcgcct cgcgcagcga gcccgccacg gtcggcacct
     3061 tggacagttc ctccggcggc aggtcgtaga ggttcttgtc catcgggtcg cccggatgga
     3121 tcttgttctg gatgccgtcg atgccggcca tcagcatcgc cgcgaaggcg aggtagggat
     3181 tggccgagga atccgggaag cggacttcga cgcgcttgcc cttgggcgag gacgcgtagg
     3241 ggatgcggca cgaggccgag cggttgcgcg aggagtaggc gagcagcacc ggcgcctcga
     3301 agcccggcac gacacgcttg taggagttgg tgctggcgtt gcagaaggcg ttgagcgcct
     3361 tggcgtgctt gatgatgccg ccgatgtagt agagcgccgc ctccgacagg tcggcgtaac
     3421 ccgagccggc gaacaacggc ttgttgtcct tccacaccga ctggtgggtg tgcatgcccg
     3481 agccgttgtc gccgtagagc ggcttgggca tgaaggtcag tgtcttgccg tagctgtggg
     3541 cgacgttgtg cagggtgtac ttgtacttct gcacgttgtc ggcggtcttc accagggtgt
     3601 cgaagcggaa gcccagctcg ttctggctgg gtgccacctc atggtggtgg atttccatgg
     3661 tcagccccat gtcggcgcag accgacatca tctcggcacg caggtcgttc atggaatcga
     3721 cgggctgcac cgggaagtag ccgcctttga tgcccgggcg atggcccatg ttgccgccct
     3781 cgaactcggc gccggtattc cacggcgatt cgctgtggct cagcttgtag aagctgccgt
     3841 tcatctgcac atcgaagcgc acgtcgtcga acacgaagaa ttccagctcg ggcccgaaca
     3901 ccgcggtatc gccgatgccc gacgacttca tgaacgcctc ggcgcgcttg gcggtcgagc
     3961 gcgggcaacg cgcatagagc tggccggtcg agggctcgac gacgtcgcag ttgacgatca
     4021 gcgtggtctg cgcagtgaag ggatcgagga cggcggtggc gggatcgggc atgaggatca
     4081 tgtccgagtc gttgatcgcc ttccagccgg cgatcgacga tccgtcgaac atcacgccgt
     4141 cgacgaacga gccttcgtcg gtggccgacg ccatgcgggc cgtatgctgc cacttgccgc
     4201 gcggatcggt gaagcggaag tcaacgaact tgacatcctt ttccttgatc atcgcgagaa
     4261 cctgtttcgc gtccatgatt cgttcgtccc tcttttgtgg tctacttcct catgccccca
     4321 aaggccgagt tctcatacgg cggcgtcgcc gcgctcgcca gtgcgaattc ggatggcgtc
     4381 gtcgatgctc gacacgaaga tcttgccgtc gccgatgcgg ccggtatggg ccgagctgcg
     4441 gatcgcctcg accgccttct cgaccatctc atcctcgatg atgagctcga tcttcacttt
     4501 gggcaggaag tcgacaacgt actcggcgcc gcgatagagc tcggtatggc ccttctgccg
     4561 tccgaacccc ttggcttcca ggacggtgat gcccttgagc ccgatctggt tcagtgcgtc
     4621 cttcacttcg tcgagcttga agggcttgat gatcgcttcg atcttcttca ttggcttgag
     4681 atatccccac gcacaagcgc cggtgctgcc ggtcggggca acccgcacgc gcctaggtca
     4741 gcagattcta tgccatactt cttcacagtg cgggggcgtg aattggaaac aggactgacc
     4801 gttgcgtggg cgaagtgaac gaatacaagg caaaagtctg cataaaacaa gagcagggac
     4861 aggatttccc atgaagccgg ccaattcttt gatgtccggc ctcggaacga cggttttcga
     4921 ggtgatgtcg gcactcgccc gcgagcatca gtcggtcaac ctcggccagg gctttcccga
     4981 cgacaaggga ccggatgccg tgaggtccgc ggcggccgac tatctgatga acggccacaa
     5041 ccagtatccg ccgatgatgg gccttcccga gctgcgccag gccgtcgccg agcatgcccg
     5101 gcggttccag gggctggagg ccgactggca aagcgaggtg ctggtgacct ccggggctac
     5161 cgaagcactg ggcgattgcc tgttcggctt gatcgagtcg ggcgacgaag tcgtgctgat
     5221 cgaaccgctt tacgattcct atctgccgat cgtgcggcgg gccggcggca tccccaagct
     5281 ggtgcggctc gagccgccga cctggcgcct gccgcgcgag gaactggccg cggcgttcag
     5341 cgcgcgcacc aagctgatcc tgttcaacac gccgatgaac ccgtgctcga aggtcttcga
     5401 ccgcgaggag ctcgacttca tcgccggcct ttgcctggag cacgacgtct atgccgtgtg
     5461 cgacgaggtc tatgagcaca tcattttcga cgaccggcgg cacctctcga tcatgacctt
     5521 gccgggaatg cgcgaacgca ccgcgcgcat cggttcggcc ggcaagagtt tcagcctgac
     5581 cggctggaag gtcggctatg tcacggctgc gcccgagttg atgaagtcga tcgccaagac
     5641 gcaccagttc atgaccttca cgacgccgcc caacctgcaa tggggcgcgg cgacgggcct
     5701 gcggctggcc gacgattact tctcgaccct cgccgccgac atgcagcgca agcgcgaccg
     5761 gctgggcaat gccctgtccg acatcggctt cgaggtcttg ccggcgcacg gcacttattt
     5821 cgtgacgacc gactttcgcc cgctcggctt caacggcacc gacgaagatt tctgccgcca
     5881 tatcacggtc gaagccggtg tgaccgccgt gccggtcagt gccttctacg acgatccggc
     5941 tcgcgcgccg cgccactttg cacgcttctg cttttgcaag cacgacgcca cgctggacag
     6001 tgccatcgat cggcttggtc ggcattttct caggtaatca gcggcttaga accgtttttc
     6061 gaaaccgttg caaacgatac atttgtaacc ccgacacaac cgcagatgta tttgatactg
     6121 agcgcgtcgg ccgatcgccg gcatcctgca gccgaccgag ctgaaacata caggttcatg
     6181 tctgagacca gcgccggcat gggctccaac gagagcgttg tgtccgtatc gagagcttcc
     6241 agacctgccc gaatcgacgg ccgccgcttg cgcagcgagc ggaccaggca gttgatcatc
     6301 gaggcttacc tggcgttgct gcgggagaac cccgtggtgc ccctgccgac cgcggcccgg
     6361 atcgccaagc gcgcgggcta ttccgtgcga tcggtgttcg agcggttccc cgatctcggc
     6421 aagttgcgcc ttgccgcgac cgactacgcc cttgcgcagg cggcggccct tgcaccgccg
     6481 cgcaatatcg acggcgatcg cccgacccgg atcaggtccc aggtcgagac ccgcgccgga
     6541 acctgcgaac gcggcgtggc gctgtggcgc gtgctgattg ccagcgtcgc cgaggacgac
     6601 gcgctgaagg accgcgtccg catcagccgc gagcggacga tcgaacggct ggagatcatg
     6661 taccggccgg agctctcgac tctttccgat caggagcaca agcacatgct gatcgcgctc
     6721 gaagcgatta ccgacatcga aagctgggcg cgcatgcgcg aactgcacgg cctcagcttc
     6781 gaccgggcct gcgacgtctg gatcagcgcg atcgatcgca tgctgccgcc gacgccgcag
     6841 gctgcttgac gggccggcgc accgcatggg atgcgatctt gcgtcagcca ggcaggactg
     6901 agatggcttt gcccaaacgg tctgctctca agggcccccg gatcgacggc cgccgcttgc
     6961 gaagtcagcg gacccagcag ttgatcatcg aggcctatct cgcccttgcg ggcgagaact
     7021 cgccgcaggt gccgacggcc gctcagattg ccgagcgcgc cggctactcg gtgcgctcgg
     7081 tgttcgagcg ctttcccgac atccatagcc tgcaggtggc ggcggtcgac cacgcgctcg
     7141 cccagatcgc cgctccgctg ccttgccacg atgccggcgc tgaccgcgag acccggatca
     7201 ggagccaggt cgaggggcgg ggccgcacct gcgaacgctg gctgccgctg tggcgatccc
     7261 tggtcgtgaa ccagggcgtg tcgaccgagc tcaggcagcg ggtggcgagc ttgcgcgaac
     7321 gcgtcgtcga gcgcatggag tcgatatacg ctccggaact gtcgcccctg ccggccgtcg
     7381 aacgccggca tctgctgatc gtcctcgagg ccttgacgga cgtcgaaagt tgggcgcgca
     7441 tgaaggaatt ctttggcctg tccttcgagg aggcctgcgc cgcctgggtg caggccatcg
     7501 atcgcctgtt gccgccgaca ccggctggtt cgtgatgaca gccgccgacg acacttcgac
     7561 gggaaattcc tcgccggccg cggccgcgcc cgtccctcgg atcgacggcc gccacctgcg
     7621 aagcgcgcga accaagcagg tgatcatcga ggcctacctg gcgctgctgc gcgaaaatcc
     7681 acaggtcccg accgcggcgc ggatcgccga acgagccggc tattcggtgc gctcggtgtt
     7741 cgagcgcttc gccgacctgc atgcgctgcg cgtggcggcg accgactacg ccctggcgcg
     7801 gggtaacgcc caggcggcgg cgggcgatgt cgcgggcaac cgcgaagcgc ggctcaaggc
     7861 ccatgtcgag acgcgggccg ggatctgcga acagtggctg ccgctgtggc gggcgctcaa
     7921 cgccaatcag ggcgactcgg cagagctcaa gtcgcggatc cttctcgtgc gccaggcgat
     7981 cctcaagcgg atcgagctga tgtaccggac ggagcttgcg acgttggagg agcgggagca
     8041 tcggcagatt ctgatcgcta tcgaaaccct ggtcgatttc gaaagctggg cgcacatgcg
     8101 cgagcacaaa ggcctgtcct tcgccgaggc ctgcgccgtc tggatccgcg cgatcgaccg
     8161 gctgctgccg ccgacgccgg tttcttgacg ctccggccgg gcaagcgtag gaaggcgcgc
     8221 ttcgtcggga gcgacccacg atggcggccg tagctcaggt ggttagagcg ccagattgtg
     8281 attctggatg tcgccggttc aagtccggtc ggccgcccca gtggctctcg taccatggtc
     8341 gctgatccaa ccgtgcgcga cctcgcgccc cacgacgatt ttgtcctgtt gagctgcgcg
     8401 cagatggcca aggccgacgc tgcagcaatt gccggcggca tcgccgggag cgcgctcatg
     8461 gaggctgcgg gacgggcggt cgccgaggcg gcggtggggc gttaccggcc acggccggtc
     8521 gtcgtactgt gcgggcccgg caataatggc ggcgacggtt tcgtggcggc gcgccatctc
     8581 gaggcggccg gctggcccgt tcgggtcggg ctgctcggcc cgcgcgacgc cttgaaaggc
     8641 gatgcggcgt gggcggcgca gtcgtggcga ggtccggtcg agccgctctc gctcggcctt
     8701 ctcgatggcc gaccgctggt ggtcgacgcc ttgttcggcg cagggctcac gcgcgccatc
     8761 gacggcgttg ccggcgaggc gatcgacagg atcaaccgcg aggcgcttgc cgtgatcgcc
     8821 gtcgacgtgc cgagcgggct gcatggcgac agcggcgaag tgatgggccg ggcgccgtgc
     8881 gccgagcgca cggtgacgtt ctttcgcgcc aagcccggcc actattcgct cgaaggcttg
     8941 cggcgctgcg gtgtgctcgg cgtggccgac atcggcattc cgctggcgat gctgaaggag
     9001 atcgcaccgc ttttgtggct gaaccatccg tcgctgtggc gccagcattt gcggcgcgac
     9061 ggtcttgccg accacaagta cgcccgcggt cacctcacca tcctgggggg cgccgccgcg
     9121 acgggcgcgg cgcgtttggc ggcgctggct gggcggcggg ccggcgcggg cctggccacc
     9181 atcgccacgc cgcgcgtcgc gatggcgatc ttccaggcgg ccgaaccggg caacctcgtc
     9241 agcgagagcg aggacggcgc tggctttgcg cgcctcctgg aggacgagcg gcgcactgcg
     9301 gccttgatcg gccccggctc gggcctcaac gaacggaccc gggcgtcggt cttggcggcg
     9361 ctgacgacgg gccgcgccgt cgtgctcgac gccgacgcca tcaccgtctt cgcccaggcg
     9421 cctaaaagtc tgttcgacgc ggtcaaggga ccggctttgc tgacgcccca tgagggcgag
     9481 ttcaggcgat tgttccccga tctggcgaag ctgccgggaa aggtcgagcg cgcccgcgag
     9541 gcagccaggc ggagcggcgc cacggtgctc ttgaagggcc ccgatacggt gatcgcagcc
     9601 cccgacggcc gggccgtcat caacatccac gcgccggcga gcctcgccac cgcaggctcg
     9661 ggcgatgtgc tgtccggcat cgccggcggc ttgatggcgc aaggcttggc gccgctggcg
     9721 gccggcgcgg ccgccgcctg gctccatggc gaaagcgccc tgcgcttcgg ccggccgggc
     9781 ctcattgccg aggacctggt cgactgcctg cccgacgctc tgcagacgat cgtgaaaccc
     9841 gattgacctg cctcccccgt atgacggggg aggcaaatga tccgcttcaa ttgaccgccc
     9901 ggcgggcgcg ggctaagagg cgcgcgattc ggcccttgcg gcgcggcccg aaggccctgg
     9961 ctcgtactgg ggcctggcgt cgggcgggcg tggtggaatt ggcagacacg cgagatttag
    10021 gttctcgtgc cgcaaggcgt gggggttcaa gtccctccgc ccgcaccaga cggaaatgga
    10081 agtgagacga tgcaagtgac ggaactcgca gccgatgggc tgaagcggca attcaagatc
    10141 gtcgtgccgg ccggcgacct gtcggccaag gtcgacgagc gcctggtcga gatggcgcgc
    10201 accgcccaga tgccgggctt tcgtccgggc aaggtgccgg tcggcctgct gaagaagcag
    10261 tacggccagg cactgttcgg cgaagcggtc gagcaggcgg tcaattccag caccgccaag
    10321 gcgatcgagg atcgcgggct aaaacctgcg ctgcagccgc gcgtcgatct caagcagctc
    10381 gaggagggca aggacgtcga gttcgaggtc gccatcgaag tgctgccgga aatcggcaaa
    10441 ttggattttt ccgatatcga gctcgagcgc ctgaaggcgg tcgtgccgga caaggacgtc
    10501 gacgaggcga tcgaacgcat cgccaaggcc aaccgtgagc agaagccggt cgatccgccg
    10561 cgcccggcgc agaagggtga cgcgatcaag ctcgacttcg tgggctcggt cgacggcacg
    10621 gaatttcccg gcggcgcggc gcaggactac acgctcgagc ttggctcggc gtcgttcatc
    10681 ccgggcttcg aggaccagct gatcggcgcc gaggtcggca agccggtcga cgtcaaggtg
    10741 accttcccgg ccgactacgg caataccgag ctcgccggca aggaggccgt cttcaagtgc
    10801 acgatcaagg agatccacga gttcgtcgac aagccggccg acgatgagct ggcgaagaag
    10861 aacaacttcg agaacctcga ggcgatgcgc aaagccgtcg gcgagcgcat cggccaggac
    10921 tatgcccgca tctcccgctc gatgatcaag cgccagctgc tcgacaagct ggcggaggcg
    10981 cacaagttcg ccgtacccga ggggctggtc gagggcgaat tcaaggccat ctggcagcgc
    11041 atcgaggagg ccaaaaaggc cggcgagaag ctcgaggatg acgaggacaa gatgcgccag
    11101 gaataccgcg acatcgccga gcgccgggtt cgcctgggcc tgctgctggc cgatgtcgga
    11161 cgttccaaca gcatcgaagt gacgcccgag gagctcaacc aggcggtgat gcgcgaggcc
    11221 atgcgctatc ccggccagga gcgccaggtg ctggaattct acggcaagaa cgccgagctg
    11281 aaggaacagc tcagggcgcc gatcttcgag gaaaagacgg tcgacttcat cctcgagctg
    11341 gccaaggtcg ccgacaagcc ggttacgccc gaggaactgc tcaaggcggc ccgcgagacg
    11401 gaagaaaagg aagaaaagga cgacgagaag ccggcggaag cggcgacgaa ttgatccagg
    11461 gacggccatc gggggccggc ggtcttgaac cggccggctg gcgctgccac ttttaaacga
    11521 cagtcacaca agggggcccg caatgcggcg cgaccgcgat ccgttggaag tctacaataa
    11581 ctactatgtg ccgatggtcg tcgagcagtc ggcgcgcggc gagcgcggct acgacatctg
    11641 gtcgaggctg ctgaaagagc ggatcatctt catgaacggt ccgatcgagg acaatgtcgc
    11701 gggcctggtc tgcgcccagc tgctctatct ggaagccgag aacccgacca aggacatctc
    11761 gttctatatc aactcgccgg gtggcgtggt gacgtccggc atggcgattt acgacaccat
    11821 gcagtatgtg cgcccgcaaa tctcgaccct ggtgttcggc caggccgcct cggccggctc
    11881 gctgctgctg atggcggggg ccaagggcaa gcggttcgcg ctgcccaacg cgcggatcat
    11941 gatccaccag ccgtcgggcg gcgcccaggg ccaggccacc gatatcgaaa ttcatgcccg
    12001 ggaaatcttg tcgaccaggg cacggctgaa ccagatgtac gttgtccaca cgggccgtac
    12061 cattgaggag atcgaacggg cgatggagcg cgacaagttc ttctcgcccc cggaagccaa
    12121 ggagttcggg ttaatcgacg atgtgctcga aaaacgcccg actccgacca tccaggcggc
    12181 tgcctcctga gaggcagttg cgaccaattg tttctcgtca acccgccgac acaccatatt
    12241 ttgaggttgt ggcgatccgg gggtcgcgtt taacatagtc ttgcgtgcgg gctcgcaggt
    12301 ggcgggcccc ccaagcggag gtgcgttacg aaatgccagc cgccaaatcc gggggcgact
    12361 cccgcaacac cctatattgc agcttctgtg gcaagagcca gcatgaggtc cgcaagctca
    12421 ttgccgggcc cacggtgttc atctgcgatg aatgcgtcga gctctgcatg gacatcatcc
    12481 gggaggagag caagaccacc ctggtgaagt ccaaggacgg cgtgccgtcg cccaaggaga
    12541 tccgccagat cctcgacgac tatgtgatcg gccaggacca ggccaagcgc atcctcgctg
    12601 ttgcagtgca caatcactac aagcggctga gccatggcgg caaggccaac gacgtcgaga
    12661 tcgccaagtc caacatcatg ctgatcggcc cgaccggctg cggcaagacc ctgctggccc
    12721 agacgctggc gcgcatgctg gacgtgccgt tcaccatggc cgacgccacg acgctcaccg
    12781 aagcgggcta tgtcggcgag gacgtcgaga acatcatcct gaagctgctg cagtcggccg
    12841 actacaacgt cgagcgggcg cagcgcggca tcgtctatat cgacgaggtc gacaagatca
    12901 gccgcaagtc cgacaacccg tcgatcacgc gcgacgtgtc gggcgagggc gtgcagcagg
    12961 cgctgctcaa gatcatggag ggcactgtcg cctcggtgcc gccgcaaggc ggacgcaaac
    13021 acccgcagca ggagttcctg caggtcgata cgaccaacat cctgttcatc tgcggtggcg
    13081 ccttctcggg cctcgacaag atcatctcga tgcgccgcca gggcacgtcg atcggctttg
    13141 gcgccgaagt gcgcgggccg gaagatcgtc gcaccggcga ggtgctgcgc gatctcgagc
    13201 cggaagacct gttgaagtac ggcctgatcc ccgagttcgt cggccgcctg ccggtggtcg
    13261 ccacgctgga agacctcgac gagggcgccc tgatcgagat cctgaccagg cccaagaacg
    13321 cgctgctgaa gcaataccag cggctgttcg acatggagag cgtaaagctc aaattctccg
    13381 acgacgcgct gcgcgcggtc gcccagaagg cgattctgcg caaaaccggg gcgcgcggcc
    13441 tgcgctcgat catggagacc gtgctgctcg acaccatgta cgacctgccc tcgctcgacg
    13501 gcgtggagga agtggtgatc aaccgcgaag tcatcgaagg gcgggcccaa ccgctctatg
    13561 tgcatggtga gcgcaaggaa ggcattgccg ctgcgccagc ctgagttttg ctgcgccggc
    13621 ggcagccgct gccggcggtc ccgccgatgg gcttgaacaa ccctctgttc aggccaatct
    13681 ctgctcacga gcgcgcgtgc ccgcgggccc gtaaatcgcc cattcgggga ttacggccgg
    13741 ggtgcgggtg gctctaacag cgtacgtagc gaggcatcat gaacgccccc acccaaggaa
    13801 ccgtctatcc cgtcctgccg ttgcgcgaca tcgtcgtgtt ccccggcatg atcgtgccgc
    13861 ttttcgtcgg ccgggagaag agcgtgaagg ccctcgaaga ggtcatgaag gacgacaagc
    13921 aaatcctgct gatcgcgcag aagaacgcca gccaggacga tcccggcccc gacgacatct
    13981 acaccatcgg cacgctcggc accgtgctgc agctcctgaa gctgcccgac gacaccgtga
    14041 aggtgctggt cgagggcggc cgtcgcgtga agatcgtcgg ctacaccggc aagaccgaat
    14101 tcttcgaggc caacgccatc gacatggagg agacggcggg cgaatcggcc gagctgcagg
    14161 cggccgcgcg cactgtggtc tcggagttcg agaactacgt caagctcaac aagaaggtgc
    14221 cgcccgaggt ggtcgtctcg atcaacaaga tcgaggagcc ggccaagctc gccgacacga
    14281 tctccgccca cctggcgctc aaggtcgccg agaagcagca gctgctcgag ctcgatgcgg
    14341 tgtcgaagcg gctggagcgc atcctcggcc tgatggaagg cgagatcggc gtgttgcagg
    14401 tcgagaagaa gatccgcaac cgcgtcaagc gccagatgga gaagacgcag cgcgagtatt
    14461 acctcaacga gcagatgaag gcgatccaga aggagcttgg cgagaccgag gacggtcgcg
    14521 acgagatctc cgagctggag aagcgcatca agaagacgcg gttttccaag gaagcccgcg
    14581 agaaggccaa caacgagctg aagaaacttc ggaccatgag cccgatgtcg gccgaggcga
    14641 cggtggtgcg caactacctc gattggctgc tgtcgattcc gtggcgcaag ccgaccaaga
    14701 tcatcaagga cctgaagtac gccgaggaca tcctcaacgc cgaccaccac ggcctcgaga
    14761 aggtcaagga gcgcatcctc gagtatctcg cggtccagca gcgcgtcgac aagatgaagg
    14821 gtccgatcct ctgcctggtc ggccctccgg gcgtcggcaa gacctcgctc ggcaagtcgg
    14881 tcgccaaggc gaccggccgc aacttcgtgc gcatgtccct gggcggcgtg cgtgatgagg
    14941 ccgagatccg cggtcatcgg cggacctata tcggctctct gccgggcaag gtcctgcaga
    15001 gcatgaagaa ggcgaagtcg tcgaatccgc tcttcttgct cgacgaggtc gacaagctcg
    15061 gcgcggactt ccgcggcgac ccgtcgtcgg cgctgctcga ggtgctcgac ccggagcaga
    15121 actcgacctt caacgaccac tacctcgagg tcgactacga cctgtcgaac gtgatgttca
    15181 tcaccacggc caactcgctg cgcatggcgc agccgctgat ggaccgcatg gagatcatcc
    15241 ggctggccgg ctacaccgag gacgagaagg tggcgatcgc ccgcaagcac ctgatcatga
    15301 agcagatcga ggcgaacggc ctcagggagg gcgagctcga catccacgac gacgccgtgc
    15361 gcgacctcgt gcgctactac acgcgcgagg cgggcgtgcg caatctcgag cgcgagatcg
    15421 ccaacctcgc ccgcaaggcg accaaggaaa tcctgatgaa gggggtttcc aaggtgaaga
    15481 tccgtgccaa gaacctcgac aagtacgcgg gcgttcgtcg cttccgctac ggcgaggccg
    15541 agctcgtgga tctcgtcggc atcacgacgg gcctggcctg gaccgaggtc gg
//
LOCUS       DASWGA010000788         2773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_979858, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000788 DASWGA010000000
VERSION     DASWGA010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_979858"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..1632
                     /locus_tag="VF991_18440"
     CDS             94..1632
                     /locus_tag="VF991_18440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558476.1"
                     /translation="MGIGTVLRGITRVVLIAGMIGMFAAAAAAPKPGGSITVGLEVDI
                     PGLDPLKVGVYDTAAEIAAALLFDTLTTLDDSGKAVPKLAESWTHSDDYKTWTFKLRP
                     GVKFHDGTPFNAQAVAFNYARQKDPNNHCRCAFYIQFINKVEAVDDLTVAFQLRDPSV
                     DLPAVISPAAVNNPIHSPAAIQKLGDDYNRNPVGTGPFVLKSWTAGDRLVLERNPDYW
                     NKGHPYLDRVVLRPLPDAQARFASLQSGESDLVWDDEFDADNILRARNDPALVVQSYT
                     GSGATVYAFNTKLAPFDDVRVRQALVMAIDRKKWSQVVTNGLAKPATNPYGDGSWVKC
                     SDDGALPYDPGKAKQLIADYGKPVEFKMIATATPRGRANGQVLQQFWKQVGADMEIEQ
                     VDQTTVVTRAFMRQFQLTPWRIIDLADPDPQMYANFHTGSPVALANYSNPELDKLLEH
                     ARVTADKELRTDDYCAISRLINKEAIWFWTFQNTYYAIAKSKLKGVPKLYSGIIDVSD
                     AWLE"
     gene            1639..2589
                     /locus_tag="VF991_18445"
     CDS             1639..2589
                     /locus_tag="VF991_18445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558477.1"
                     /translation="MLGYIGRRLLHLFPVLLAVTLLTFLIASLLPGDLAYAILGDQAT
                     PDKVAALRAQMGLDQPIAWRYLHWLGGVIQGDLGRSFRTGETVLAAIGARLPVSLQLM
                     LMAEVAGLLIGVPLGIFCAVRQGGSFDRLLTGGAFGMLSVPAFLWAILLIYLFAVRLR
                     VLPATGWVPFEEDAVGNLRSFVLPALTLALGEWPVLMRVLRSDMIATLQEDYIAMAMA
                     KGLKPARILLVHALKPSSLTLVTVTGINIGRLIGGAVIVESIFALPGIGRLLVGAIYA
                     RDFIILQGVVLFVAVGFVAVNFIVDMLYAVLDPRIRHGRA"
     gene            2576..>2773
                     /locus_tag="VF991_18450"
     CDS             2576..>2773
                     /locus_tag="VF991_18450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558478.1"
                     /translation="MAALDAALDAAVAPRRRRRLSNIFWAAAAWIAVVVLAAILANFL
                     PIPSPTEMDMLARRMPPDAQHW"
BASE COUNT          453 a          950 c          881 g          489 t
ORIGIN      
        1 caatcccccc ctcaacaagc ggacggaatt cgtcctaaga tgccggccaa cgacggcggc
       61 aagaattccg ccgcggaccg ggaggaacct gccatgggaa tcgggactgt tctgcgcggc
      121 atcacgcgcg tcgtgcttat cgccggcatg atcggcatgt tcgcggccgc cgccgcggcg
      181 ccgaagccgg gcggcagcat cacggtcggg ctcgaggtcg acattcccgg cctcgatccg
      241 ctcaaggtcg gcgtctacga taccgcggcg gagatcgcgg cggcgctgct gttcgacacg
      301 ctcaccacgc tcgacgacag cggcaaggcg gtaccgaagc tcgcggagtc ctggacccat
      361 tccgacgact acaagacctg gaccttcaag ctgcggccgg gcgtgaagtt tcacgacggc
      421 acgccgttca acgcccaggc cgtcgccttc aattatgcgc ggcagaagga cccgaacaat
      481 cactgccgct gcgcgttcta catccaattc atcaacaagg tcgaagccgt cgacgacctg
      541 accgtcgcct tccagctccg cgatccttcg gtcgatctgc cggcggtgat atcgcctgct
      601 gccgtgaaca atccgatcca ttcgccggcg gcgatccaaa aactcggcga cgattacaat
      661 cgcaatccgg tcggcaccgg gccgttcgtg ctgaaatcct ggaccgcggg cgaccggctg
      721 gtgctcgagc gcaatccgga ttactggaac aagggacacc cgtatctcga tcgcgtcgtg
      781 ttgcggccgt tgcctgacgc gcaggcgcga ttcgcgagcc tgcagtccgg cgaatccgat
      841 ctcgtctggg acgacgaatt cgatgccgac aacatcctgc gggcgaggaa cgatcccgcg
      901 ctggtggtgc aaagctatac cggctccggc gccacggtgt acgccttcaa caccaagctg
      961 gcgccgttcg acgacgtgcg cgtgcgtcag gcgctggtga tggccatcga ccgcaagaag
     1021 tggtcccaag tggtcaccaa tggcctggcc aagccggcga ccaatcccta cggtgacggc
     1081 tcgtgggtca agtgcagcga cgacggcgcg ctgccctacg atccgggcaa ggccaagcag
     1141 ctcatcgccg attacggcaa gccggtcgag ttcaagatga tcgcgaccgc gactccgcgt
     1201 ggacgcgcca atggccaggt cctgcagcag ttctggaagc aggtcggtgc cgacatggag
     1261 atcgagcagg tcgaccagac cacggtcgtc acccgcgcct tcatgcgcca gttccagctc
     1321 acgccgtggc gcatcatcga cctcgccgat ccggatccgc agatgtacgc caatttccac
     1381 accggcagcc cagtggcgct cgccaattat tccaatccgg agctggacaa gctgctggag
     1441 cacgcgcgcg tcacggccga caaggaactg cggacggacg attattgcgc gatcagccgc
     1501 ctcatcaaca aggaggcgat ctggttctgg actttccaga acacctatta cgccatcgcc
     1561 aagagcaagc tgaagggcgt ccccaagctc tacagcggga tcatcgacgt ctccgacgcc
     1621 tggctcgagt agccgacgat gctcggctac atcgggcgcc ggctgctgca tctcttcccg
     1681 gtgctgctgg cggtgaccct gctgacgttc ctgatcgcgt cgctcttgcc cggcgatctc
     1741 gcctacgcga tcctcggcga ccaggcgacc cccgacaagg tcgcggcgct gcgggcgcag
     1801 atgggcctcg accagccgat cgcctggcgc tacctgcatt ggctcggcgg cgtgatccag
     1861 ggcgatctcg gccgctcctt ccgcaccggc gagacggtgc tcgccgccat cggggcccgc
     1921 ctgccggttt cgctgcagct gatgctgatg gcggaggttg ccggtctgct gatcggcgtg
     1981 ccgctcggga ttttttgcgc ggtgcgccag ggcggcagct tcgaccgact gctgaccggg
     2041 ggcgcgttcg gcatgctctc ggtgccggcg ttcctgtggg cgatcctcct gatctatctg
     2101 ttcgcggtgc gcctgcgcgt gctgccggcg accggctggg tgccgttcga ggaggacgct
     2161 gtcggcaacc tgcgcagctt cgtgctgccg gcgctcacgt tggcgctcgg cgaatggccg
     2221 gtgctgatgc gcgtgctccg cagcgacatg atcgccaccc tgcaggaaga ctacatcgcc
     2281 atggccatgg ccaaggggct gaaacccgcg cgcattctgc tggtgcacgc gctcaagccc
     2341 tcctcgctca cgctggtgac cgtcaccggc atcaacatcg gccgcttgat cggcggcgcc
     2401 gtcatcgtcg agtcgatctt cgccctgccc ggcatcggcc ggctgctggt cggcgccatc
     2461 tatgcgcgcg acttcatcat cctgcagggc gtggtgctgt tcgtcgccgt gggcttcgtg
     2521 gccgtcaact tcatcgtcga catgctctac gccgtgctcg atcccaggat ccgccatggc
     2581 cgcgcttgac gccgcgctcg acgccgcggt tgcgccacgc cggcggcggc gcctgagcaa
     2641 catattctgg gcggcggcgg cctggatcgc cgtcgtggtc ctcgccgcga tattggcgaa
     2701 ttttctgccg atcccgagcc cgaccgagat ggacatgctc gcccgccgca tgccgccgga
     2761 cgcgcagcat tgg
//
LOCUS       DASWGA010000789         1727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2232525, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000789 DASWGA010000000
VERSION     DASWGA010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2232525"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..729
                     /locus_tag="VF991_18455"
     CDS             172..729
                     /locus_tag="VF991_18455"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEX9558479.1"
                     /translation="MSTSAPSGVAGRYANALFELADNARSLDQVAQDLTTFRTMAGES
                     PDLARLLASPVIGRALQGKALLAVLDAAGITGLTRNFIGAVAANGRARELVAMATAFL
                     AELASRRGETTATVTSAVPLSPQQLQQLNDSLRAVLGGAKVSIDARVEPEILGGLVVK
                     VGSRLFDSSIRSKLQRLQLAMKGVA"
     gene            729..>1727
                     /gene="atpA"
                     /locus_tag="VF991_18460"
     CDS             729..>1727
                     /gene="atpA"
                     /locus_tag="VF991_18460"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEX9558480.1"
                     /translation="MDIRAAEISAILKQQIANFGTEAEVAEVGQVLSVGDGIARVYGL
                     DSVKAGEMVEFPGGIKGMALNLESDNVGVVIFGEDRTIREGDTVKRTGAIVDVPVGKG
                     LLGRVVDGLGNPIDGKGPIATTERRLVEVKAPGIIPRKSVSEPMQTGLKALDSLVPVG
                     RGQRELIIGDRQTGKTAVAIDTFLNQKTINQGTDESRKLYCVYVAIGQKRSTVAQIVK
                     TLEDNGAMEYCIVVAATASDPAPMQFLAPYTGCAMGEYFRDNGMHAVIVYDDLSKQAV
                     SYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNEKNGSGSLTALPVIETQAGD"
BASE COUNT          303 a          604 c          544 g          276 t
ORIGIN      
        1 gctccgcgct gaaaaaccgc ggtaatacag ggctttggca atcttgcgcc tgggaaaaca
       61 gcatggtagc aacgcgcgct tttccgggtg gggcgactgc gttgcctggg aaaagcgaca
      121 gggattcaac ggtttgccag cctgccaccg cggcttggag aggctctcga cgtgtcaact
      181 tccgccccat caggcgttgc cggccgctat gccaacgctc ttttcgagtt ggcggacaat
      241 gcccggtccc tcgaccaggt agcccaggac ctcaccactt tccgcaccat ggccggcgaa
      301 agccccgacc tcgcccgcct attggcaagc ccggtgatcg gccgcgccct gcagggcaag
      361 gcgctgctgg ccgtgctcga cgccgccggc atcacgggtc tcacccgcaa tttcatcggc
      421 gcggtggcgg ccaacggacg cgcccgcgag ctggtcgcca tggccacggc cttcctcgcc
      481 gaactggcga gccggcgcgg cgagaccacc gccaccgtga cctcggccgt gccgctttcg
      541 ccccaacagc tgcagcagct caacgattcg ctgcgcgccg tgctgggcgg cgccaaggtt
      601 tcaatcgatg cgcgcgtaga acccgagatc ctgggcggcc tggtcgtcaa ggtcggctcg
      661 cgcctgttcg attcgtccat ccgcagcaag ctgcagcgcc tgcagcttgc catgaagggg
      721 gttgcttaat ggatatccgt gccgccgaaa tctcggccat tctcaagcag cagatcgcca
      781 atttcggcac cgaggccgaa gtggccgagg tcggccaggt gctgtcggtc ggtgacggca
      841 tcgcccgcgt ctatggcctc gacagcgtca aggccggcga gatggtcgag ttccccggcg
      901 gcatcaaggg aatggcgctc aatctcgaga gcgacaatgt cggcgtcgtg atcttcggcg
      961 aagaccgcac catccgcgaa ggcgacaccg tcaagcgcac cggcgccatc gtcgacgtgc
     1021 cggtaggcaa gggcctgctc ggccgcgtgg tcgatggtct cggcaatccg atcgacggca
     1081 agggcccgat cgccacgacc gagcgccgcc tggtcgaggt gaaggcgccc ggcatcattc
     1141 cccgcaagtc ggtgagcgag ccgatgcaga ccgggctcaa agccctcgat tcgctggtgc
     1201 cggtcgggcg cggccagcgc gagctgatca tcggcgatcg ccagaccggc aagaccgccg
     1261 tcgccatcga caccttcctc aaccagaaga cgatcaacca gggtaccgac gagagccgca
     1321 agctctactg cgtctatgtc gccatcggcc agaagcgctc gaccgtcgcc cagatcgtca
     1381 agacgctgga ggacaacggc gcgatggaat actgcatcgt cgtcgccgcc accgcctccg
     1441 acccggcgcc catgcagttc ctggcgccct acacaggctg cgccatgggc gaatacttcc
     1501 gcgacaacgg catgcatgcc gtcatcgtct acgacgacct gtccaagcag gccgtctcgt
     1561 accgccagat gtcgctgttg ctgcgccgcc cgcccggccg cgaagcctat ccgggcgacg
     1621 tcttctatct ccattcgcgc ctgctcgagc gggccgccaa gctcaacgag aagaacggct
     1681 cgggctcgct gacggcgctg ccggtcatcg agacccaggc cggcgac
//
LOCUS       DASWGA010000790         4708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_90904, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000790 DASWGA010000000
VERSION     DASWGA010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4708
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90904"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="VF991_18465"
     CDS             <1..263
                     /locus_tag="VF991_18465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX9558481.1"
                     /translation="VALSGEEIPLRSGEFELLKLFAENPNRPLSRDWLLETTSHREME
                     AFDRAIDIRILRIRRKIEVDPARPTSIRTVRSAGYMFVPPDD"
     gene            354..752
                     /locus_tag="VF991_18470"
     CDS             354..752
                     /locus_tag="VF991_18470"
                     /inference="COORDINATES: protein motif:HMM:TIGR04535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX9558482.1"
                     /translation="MSSEALHEDATKLGPEVIDQHRAIVSLMEELEAVDWYNQRAKAT
                     ANPDLRAILEHNRDEEKEHASMVLEWLRRSDPKLMQHLKTYLFTEEPVTEIEAEVVQA
                     GGAAEGNESVSADGSLGIGSLRPAPGQVPK"
     gene            752..1579
                     /locus_tag="VF991_18475"
     CDS             752..1579
                     /locus_tag="VF991_18475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0140737 - encapsulin nanocompartment
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 encapsulin nanocompartment shell
                     protein"
                     /protein_id="HEX9558483.1"
                     /translation="MKNHLFRDRAPITEAGWAEIEKEAKRTLRALLAARRVVDFRGPL
                     GWDDSDVEIGRADPIAAPTGSNAVQAHLRRVQPLVELRIPFDMSRAELDAIDRGARDP
                     DLDAVTAAAREIAIAEDRAIFHGYKAAQIIGICQARAATAVPLGSSHADYPGAVSAAL
                     TKLRDDGVEGPFAVVLNEQLYKDLASRTDGGYPILSHVQRLIDGEIVWAPGLDGGLVI
                     SMRGGDFELTVGQDFSIGYLEHNLERVRLYIEESFTFLILTEQAAIPLTTGGGGKKG"
     gene            complement(1802..2137)
                     /locus_tag="VF991_18480"
     CDS             complement(1802..2137)
                     /locus_tag="VF991_18480"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEX9558484.1"
                     /translation="MPTFDQFDVVSVPFPYTDRPVRQRRPALVVSAPAYEQATGLVWV
                     VMITAAENRRWSSDVHLADARRAGLSIPSVVRPTKIATIEAGQASPIGTIAPAERRAV
                     RAAISEILG"
     gene            complement(2124..2348)
                     /locus_tag="VF991_18485"
     CDS             complement(2124..2348)
                     /locus_tag="VF991_18485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEX9558485.1"
                     /translation="MPASIRKVRLGAKAQVVLPKEARQALGLKPGDSFAFVIDGDDVR
                     VVRVPADGDDPFACFSEWASDADRKGYADL"
     gene            complement(2419..3462)
                     /gene="holA"
                     /locus_tag="VF991_18490"
     CDS             complement(2419..3462)
                     /gene="holA"
                     /locus_tag="VF991_18490"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEX9558486.1"
                     /translation="MKIEPRQAEAFLKRPDPKIRGVVVYGNDDGLVAERAMALAKTVC
                     EDLKDPFRVVDIAGDALKADPARLADEFSALSLMGGRRVIRVRPAGEESTAALENLVD
                     ATAGDALIVIESGNLTPRSGLRALAEAEACLAALPCYMDNEAALEGLVESAARARGLG
                     VDADALDWIVERLGGDRGQSRSEVDKLLLYKEGDGTKTVSLGDALAVLGDSAAIGVDD
                     VIAATFDGELIALDRALDRVFAEGGNPVQVVRALQRHVDQLHLVSGHAANGGSVEGAM
                     FKARGLARGGPVRQRFERHVRAWPLKRLSDALQAILKAEQECKSTGYPDEAIARRLCL
                     ALASWAKAARQRQ"
     gene            complement(3479..3649)
                     /locus_tag="VF991_18495"
     CDS             complement(3479..3649)
                     /locus_tag="VF991_18495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558487.1"
                     /translation="MARKPNYEFERRERDRLKAIKVAEKAQAKKEARERARLENAGEA
                     PPADGEPDPEKT"
     gene            complement(3671..>4708)
                     /locus_tag="VF991_18500"
     CDS             complement(3671..>4708)
                     /locus_tag="VF991_18500"
                     /inference="COORDINATES: protein motif:HMM:NF019869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX9558488.1"
                     /translation="QLETAPFDREEDNYWMPVDQYIGGIEHAILHLLYSRFWTRAMRE
                     VQMTSRDEPFDGLFTQGMVLHETYRATDGSWLMPEEVERTPGGNVVRASDKSPVEVGR
                     SEKMSKSKKNVVDPDQIIHDYGADTARWFMLSDSPPERDLEWTESGVTGAWRFQQRLF
                     RIASTALADLPPVGTAKPAELCDAAIELRRAAHRAIAGVSTDIEAFHFNKAVARLYEL
                     ANAIDSTEPNDQGTRWALREALEIFVRLAGPMTPHLAEELWQGLGHTSLLADSPWPLA
                     EEQLLVDDTVTIALQVNGKLRGTIQMPKDSSKEANTTAALANTDVQRAMAGKPQKRVI
                     VVPNRIVNIVV"
BASE COUNT          764 a         1586 c         1563 g          795 t
ORIGIN      
        1 ttgtcgcgct ttcgggcgag gaaatcccgc tgcgctcagg cgagttcgaa ctgctgaagc
       61 tgttcgctga aaatcccaac cgcccgctca gccgcgactg gctgctggag accaccagcc
      121 accgcgagat ggaagccttc gaccgcgcca tcgacatccg tatcctgcgg atcagacgca
      181 agatcgaggt cgatccggcc cgtccgacgt cgatccgcac ggtgcgcagc gcgggctaca
      241 tgttcgtgcc gccggacgac taggcgaccg caaaggaacc gtaacaggca gcgggcgttt
      301 accgcggcag gcggtcggac tagtgttcgc ccgaaccact ggagggtgca cgcatgtcga
      361 gtgaagcgct gcacgaagac gccaccaagc tcgggccgga agtcatcgac cagcaccgcg
      421 ccatcgtttc cctgatggaa gagctcgagg ccgtcgactg gtacaatcag cgcgccaagg
      481 cgacggccaa tcccgacttg cgcgccatcc tcgagcacaa tcgcgacgag gagaaagagc
      541 atgcgtcgat ggtgctggaa tggctgcgcc gcagcgatcc caagctgatg cagcatctca
      601 aaacctatct gttcaccgag gaaccggtca ccgagatcga ggccgaggtg gtgcaagccg
      661 gcggcgccgc cgaagggaac gagagcgtga gtgcggatgg cagcctgggc atcggcagct
      721 tgcgccccgc tccgggacag gtgccgaaat gatgaagaac catctcttcc gcgaccgcgc
      781 gccgatcacc gaagccggct gggcggaaat cgaaaaagag gccaagcgca ccctgcgcgc
      841 cctgctggcg gcgcgccgtg tcgtcgattt tcgcggaccc ctgggctggg acgattccga
      901 cgtcgagatc ggccgcgccg atccgatcgc cgcgccgacc ggcagcaacg ccgtgcaggc
      961 gcacctgcgt cgtgtccagc cgctagtcga gttgcgcatt cccttcgaca tgagtcgcgc
     1021 cgagctcgac gccatcgacc gcggcgcgcg cgatcccgat ctcgacgcgg tgacggcggc
     1081 ggcgcgcgaa atcgccatcg ccgaggatcg cgcgatcttc cacggctaca aggccgccca
     1141 gatcatcggc atctgccagg cgcgcgccgc gacggcggtg ccgctgggct ccagccatgc
     1201 cgactatccc ggcgccgtct ccgccgccct caccaagctg cgcgacgacg gcgttgaagg
     1261 cccgttcgcg gtggtgctga acgagcagct ctacaaggat ctcgcctcgc gcaccgatgg
     1321 cggctatccg atcctgagcc acgtccagcg cctgatcgac ggcgagatcg tgtgggcgcc
     1381 cggtctcgat ggcggcctgg tgatctcgat gcgcggcggc gacttcgagc tcacggtcgg
     1441 ccaggatttc tcgatcggct acctcgagca caacctcgaa cgcgtgcggc tctacatcga
     1501 ggagagcttt accttcctga tcctgaccga gcaggcggcg atcccgctca ctaccggggg
     1561 cggcggcaag aagggctagc agcgcaactc ctcaggcgaa gtagccttcg ccttgtgtcg
     1621 cgcgtcttcg cttgcatcaa caatgaccgc gccacttcag cgcggaggtt actccgcgcg
     1681 cagcggcgcg cccccagccc taacctgccg cgaaggtcgg tactgcgtcg cggtcgtgat
     1741 cggccggtct cggtcgacgt cggctgccat cgctgttgtc aatcgatccg agccgtagtg
     1801 ctcagccgag gatctcgcta atcgccgcgc gcacagcgcg ccgttcggcc ggagcgatag
     1861 taccgatggg agaggcctgc ccggcttcga ttgtggcgat cttggtcggc cgaacaaccg
     1921 atgggatcga caggccggct cgccgggcat cggcaagatg gacatcgctg gaccatcgcc
     1981 ggttctccgc cgccgtgatc atgaccaccc agacgaggcc ggtcgcctgc tcgtatgccg
     2041 gcgcggacac gaccaacgcc ggccgacgct ggcgtaccgg ccgatcagtg taaggaaacg
     2101 gcaccgagac gacgtcgaac tggtcaaagg tcggcataac ccttccggtc ggcatcggag
     2161 gcccattcgg agaagcaggc gaagggatca tcgccgtcgg ccggcacacg gacgacccgg
     2221 acatcatcgc cgtcgatgac aaaggcgaag ctgtcgcccg gcttcaagcc gagggcttgg
     2281 cgggcttcct tggggaggac gacttgggcc ttggctccaa ggcgcacttt gcggatcgag
     2341 gcgggcatcg ctgatctcct atgtcggacg gtatgacagt aggaattcat actgaaatgt
     2401 gcaagagcga ctcagcgtct actgccgctg ccgtgcggcc ttagcccacg aggcgagcgc
     2461 caggcaaaga cgccgcgcga tcgcctcgtc gggatagcct gtcgatttgc attcctgctc
     2521 ggcttttaga atggcctgca gggcatcgct cagccgcttg agcggccagg cgcggacgtg
     2581 gcgctcgaag cgctggcgca ccggcccgcc gcgcgccagg ccgcgcgcct tgaacatcgc
     2641 cccttccacg ctgccgccgt tggcggcatg gccgctcacc agatgaagct ggtcgacatg
     2701 gcgctgcagg gcgcgcacga cctgcaccgg gttgccgccc tcggcgaaca cccggtcgag
     2761 cgcgcgatcg agcgctataa gctcgccgtc aaaggtggcg gcgatgacgt cgtcgacgcc
     2821 gatggcggcg ctgtcgccga ggacggcgag cgcatcgccg agcgagacgg tcttggtgcc
     2881 gtcgccttcc ttgtagagca gcagcttgtc gacctcgctg cggctctggc cgcgatcgcc
     2941 gcccagccgt tcgacgatcc agtcgagggc atcggcatcg acgcccagcc cgcgtgcccg
     3001 cgcggcgctc tcgaccaggc cttcgagagc agcctcattg tccatgtagc agggcagcgc
     3061 cgccaggcag gcctcggctt cggccagcgc gcgcaggccc gagcgcggcg tgagattgcc
     3121 gctctcgatc acgatcagcg cgtcgccggc ggtggcgtcg accaggtttt ccagcgccgc
     3181 cgtcgactcc tcgccggccg gccgcacgcg gatcacccgc cggccgccca tcaacgacag
     3241 ggcggagaat tcgtcggcca ggcgcgccgg gtcagccttg agcgcgtcgc cggcgatatc
     3301 gacgacgcgg aacgggtcct tgaggtcctc gcacaccgtc ttggcaagcg ccatcgcccg
     3361 ctcggcgacc aggccgtcgt cgttgccata gaccaccacg ccgcggatct tggggtctgg
     3421 tctcttgagg aacgcttccg cctgacgcgg ctcgatcttc acgccgcccc cgtgggtatc
     3481 aggtcttctc cggatcaggc tcgccgtcgg ccggcggcgc ctcgccggcg ttctccagtc
     3541 gcgcgcgttc ccgggcctct ttcttggcct gggctttttc ggcgaccttg atggccttga
     3601 gccgatcgcg ctcgcggcgt tcgaattcat agttcggttt gcgcgccatt gatggcctcc
     3661 aggcttctcg ttacaccacg atgttgacga tgcggttggg caccacgatc acccgctttt
     3721 gcggcttgcc ggccatcgcc ctttgaacgt cggtattcgc cagcgcggcc gtagtattgg
     3781 cctccttcga ggagtccttt ggcatttgta tggtgccgcg tagcttgcca ttgacctgca
     3841 aggcgatcgt caccgtatcg tcgaccagaa gctgctcctc ggccagcggc cagggcgaat
     3901 cggccagcag cgaggtgtgg cccagcccct gccacagttc ctcggcgagg tgcggtgtca
     3961 tcgggccggc caggcgcacg aagatctcga gcgcctcgcg cagcgcccac cgggtgccct
     4021 ggtcgttcgg ttcggtcgaa tcgatggcgt tggcaagctc gtagagccgc gccaccgcct
     4081 tgttgaaatg gaaggcttcg atgtcggtcg acacgccggc gatggcgcgg tgcgcggcgc
     4141 ggcgcagctc gatcgcggcg tcgcaaagtt cggccggctt ggccgtgccg accggcggca
     4201 ggtcggccag cgccgtgctg gcgatgcgaa acaggcgttg ctggaagcgc caggcgccgg
     4261 tgacgcccga ctcggtccat tcgagatcgc gctcgggcgg gctgtccgac agcatgaacc
     4321 agcgcgcggt gtcggcgccg tagtcgtgga tgatctggtc cgggtcgacg acgttcttct
     4381 tcgacttgga catcttttcg gagcggccga cctcgaccgg gcttttgtcg gaggcgcgca
     4441 cgacattgcc gcccggcgtg cgctcgactt cttcgggcat cagccaggag ccgtcggtcg
     4501 cgcggtaggt ctcgtggaga accatgccct gggtgaacag gccgtcgaac ggttcgtcgc
     4561 ggctggtcat ctgcacttcg cgcatggcgc gggtccagaa gcgcgaatag agcaggtgca
     4621 ggatcgcatg ctcgatgcca ccgatatatt gatcgaccgg catccagtaa ttgtcctcct
     4681 cgcggtcgaa cggcgccgtc tcaagctg
//
LOCUS       DASWGA010000791         1845 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_980322, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000791 DASWGA010000000
VERSION     DASWGA010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_980322"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1727
                     /locus_tag="VF991_18505"
     CDS             <1..1727
                     /locus_tag="VF991_18505"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9558489.1"
                     /translation="ENVAAYVAGSALHQNGWRDLQSSDIQNMFADIGWRSQKAELHFN
                     ATAANSNLNGPGTAPVQLLAAAPNAQFTAPNLIANTYAAANLSANIDLGDALSLQALG
                     YYRYFQQRVVNGNAPNDTPCRDDDNAGLLCFSGGLSTTVGGGLISDFLAGGQYGQLDT
                     QSTSTHGYGGSLQLTDTGKLFGRDNHFVVGASLDIGRTQFNAASFVGGLTASDRSFVG
                     PGVVIAEPGINSPVSVAVNSAGWGLYMTDTWRLTPRLALTASGRLNIATITLSDLAGG
                     DLSGSHNFVHFNPAGGLAYEIAPWLTAYGGFAVANRTPTPAELSCAGPSNSCSLANFF
                     VGDPDLKQVVSRTFEAGLRGSLPVFEKGRLRYSLALYRSDLDDDIAFINSPVQGRAFF
                     ANIGSTRRQGLDAELRLTTDRWLAYINYSFIDATFQNTFVEASGNNPAADLNGNITVQ
                     PGSRLPGIPAHQLKVGASYKVTDKWTLGANLVAASSVYLVGDEANLTAPLPPYATLDL
                     TTSYRPLPNVEVFAWARNVTNSWYYSFGTFSPTSSVAIAQAPGATATPSYSLAAPASV
                     FAGVRITF"
BASE COUNT          335 a          663 c          529 g          318 t
ORIGIN      
        1 gcgaaaacgt tgcggcatat gtcgccggca gcgccctgca ccagaacggt tggcgcgacc
       61 tgcagtcgtc cgacatccag aacatgttcg ccgacatcgg ctggcgcagt cagaaggccg
      121 agctgcactt caacgcaaca gccgcaaatt caaacctgaa cggacccggc accgcgcccg
      181 tccagctcct cgccgccgcg ccgaatgcgc aatttacggc gcccaacttg atcgccaaca
      241 cctatgcggc cgcaaacctg tcggccaata tcgacttggg cgacgcgctg tcgctgcagg
      301 cgctgggcta ctaccgctac ttccagcaaa gggtggtcaa tggcaatgcg cccaacgaca
      361 cgccgtgccg ggacgacgac aatgccggct tgctgtgctt ttcgggaggg ctgagcacga
      421 ccgtcggcgg cggcttgatc agcgacttcc tggccggcgg gcaatacggt cagctcgaca
      481 cccagagcac gagcacgcat ggctacggcg gcagcctgca gctcaccgat accggcaagc
      541 tgttcggccg cgacaatcac tttgtcgtcg gtgcgagcct ggacatcggt cggacgcagt
      601 tcaatgcggc gtcattcgtc ggcggcctga ccgcgagcga caggagcttc gtcggtcccg
      661 gcgtggtgat cgccgagccc ggcatcaatt cgcccgtcag cgtcgccgtc aacagcgccg
      721 gctggggcct ctacatgacc gacacctggc ggctcacgcc gcggctggcg ctgacggcgt
      781 ccggccgcct gaatatcgcg accatcactc tcagcgatct cgccggcggc gacctcagcg
      841 gctcgcacaa cttcgtgcac ttcaatcccg ccggcggctt ggcctatgag atcgcgccct
      901 ggctcacggc ctatggcggc tttgccgttg ccaaccgcac gccgacgccc gccgaactct
      961 cctgcgccgg tccgtcgaat tcctgcagcc tcgccaattt cttcgtcggc gacccggacc
     1021 tcaagcaggt ggtgtcgcgc accttcgaag caggcctgcg gggaagcctt ccggtcttcg
     1081 agaagggccg cctgcgctac agtctcgcgc tttaccgcag cgacctcgac gacgacatcg
     1141 ccttcatcaa cagccccgtc cagggccggg ccttcttcgc caatatcggc agcacgcgtc
     1201 gccagggcct cgacgccgag ctgcggctca ccaccgaccg ctggctcgcc tatatcaact
     1261 attccttcat cgacgccacg ttccagaaca cgttcgtcga agcctcaggc aacaaccccg
     1321 ccgccgatct caacggcaac atcaccgtgc agccaggcag ccgactgccc ggcatcccgg
     1381 cccatcagct gaaagtgggg gcctcctaca aggtgaccga caagtggaca ctcggcgcaa
     1441 acctcgtggc cgccagcagc gtctacctgg tcggcgacga ggccaacctg accgcgccgc
     1501 ttccgcctta cgccacgctc gatctgacga cgagctacag gcccctgccc aatgtcgagg
     1561 tctttgcctg ggcacgcaat gtgacgaaca gctggtacta cagcttcggc acgttctccc
     1621 cgacgtcgtc agtcgcgatc gcgcaagcgc cgggggcaac cgccacgccc agctacagtc
     1681 ttgctgcgcc ggccagcgta ttcgcgggtg tgcgaatcac cttctaggta aggccatgac
     1741 atcggtcggc gtcgatttag gacagtactg ctgactgaat ttcctcccgc gcatttcgca
     1801 tgacccccgt tcattccttg cgtatcgtct agatcaacaa catgg
//
LOCUS       DASWGA010000792         2047 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_980380, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000792 DASWGA010000000
VERSION     DASWGA010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_980380"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..290)
                     /locus_tag="VF991_18510"
     CDS             complement(<1..290)
                     /locus_tag="VF991_18510"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9558490.1"
                     /translation="MRVFTTLPQEDLRKVGPAAQAIEAAGYTGVSTQENRHDPFLALA
                     VAGAATRRIELHTGVAIAFARSPMTVANVGWDLAASFGGARVTLGIGSQVRA"
     gene            complement(294..1928)
                     /gene="gcvPB"
                     /locus_tag="VF991_18515"
     CDS             complement(294..1928)
                     /gene="gcvPB"
                     /locus_tag="VF991_18515"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HEX9558491.1"
                     /translation="MVQSLDRSQGRIGGAAADTTVALAPATFTGNRALQIEEPLIFEM
                     GQAGRCGVDLPEPPKVKDRLNGLRRSGEIGLPGLSEPQVVQHYTRLSQKNYAIDMGVY
                     PLGSCTMKHNPRINEKVARLPGIGDLHPLQPVSTVQGALALIDRLAHWLKTLTGMPAV
                     AMSPAAGAHGEMCGMMAIAAALEARGERARRKVVLAPESAHGTNPATAAALGFIVKPI
                     PANERGRVDLAALKAALGPDVAAIMLTNPNTCGLFESEIVEISKAVHEAGAFFYCDGA
                     NFNAIVGRVRPGDLGVDCMHINLHKTFSTPHGGGGPGAGPVVLSAALAPYAPYPWIVK
                     DGDSSLGDKSPSDRWRVAEEGTRLEGAPLGRLKAFHGQMGMFTRALAYIMSHGADGLK
                     QVAEDAVLSANYVMASLKDTMSPAFEGPCMHEALFDDSFLKDTGISTLDFAKAMIDEG
                     YHPMTMYFPLVVHGAMLIEPTESQAKEDLDLFIATLRSLAERAKTGNAAEAFKAAPRF
                     APRRRLDETLAARKPVLRWRPSNNPPEGDPMKQAAE"
BASE COUNT          302 a          703 c          703 g          339 t
ORIGIN      
        1 tgggcgcgga cctggctgcc gatccccaac gtgacgcgcg cgccgccgaa gcttgcagcc
       61 aggtcccagc cgacattggc cacggtcatc ggcgagcgtg cgaaggcgat ggcgacgccg
      121 gtgtgcagtt cgatgcgtcg ggtcgcggcg ccggcgacag cgagcgccaa gaacgggtcg
      181 tgcctgtttt cctgggtgct gacgccggtg tagcccgccg cctcgatcgc ctgggcggcc
      241 ggcccgacct tgcgcagatc ctcttgcggc agcgtcgtaa acacgcgcac gagctactcc
      301 gccgcctgct tcatcgggtc gccttcgggc gggttgttcg agggccgcca gcgcagcacc
      361 ggcttgcggg cggccagcgt ttcgtcgagc cgccggcgcg gcgcgaagcg tggcgccgcc
      421 ttgaacgcct ccgccgcatt tcctgtcttg gcgcgctcgg caagcgaacg cagcgtggcg
      481 atgaagaggt cgaggtcctc cttggcctgg ctctcggtcg gctcgatcag catggcgcca
      541 tgcaccacca gcgggaagta catggtcatc ggatgataac cctcgtcgat catcgccttg
      601 gcgaagtcga gggtgctgat gccggtgtcc ttgaggaagc tgtcgtcgaa cagcgcttcg
      661 tgcatgcacg gtccttcgaa ggctgggctc atggtgtcct tcagcgaggc catcacgtaa
      721 ttggcggaga gcaccgcatc ctcggccacc tgcttcagac cgtcggcgcc gtggctcatg
      781 atgtaggcca gcgcgcgggt gaacatgccc atctggccgt ggaaggcttt cagcctcccc
      841 aacggcgcgc cctcgagcct ggtcccttcc tccgcgaccc gccaccggtc gcttggcgac
      901 ttgtcgccaa gcgacgagtc gccgtccttc acgatccagg gatagggcgc gtagggcgcc
      961 agcgccgccg acagcacgac ggggccggcg cccggcccgc cgccgccatg cggcgtcgag
     1021 aaggttttat gcaggttgat gtgcatgcag tcgacgccga ggtcgcccgg ccggacgcgg
     1081 ccgacgatgg cgttgaagtt ggcgccgtcg cagtagaaga aagcgcccgc ctcgtgcacg
     1141 gccttggaaa tctcgacgat ctcgctctcg aacaggccgc aggtattggg attggtcagc
     1201 atgatcgccg cgacgtcagg ccccagcgca gccttgagcg cggcaagatc gacccgcccg
     1261 cgttcgttgg ccgggatcgg cttcacgatg aagccaagcg cggccgccgt cgcggggttg
     1321 gtgccgtgcg ccgattcggg cgccagcacc accttgcgcc gggcgcgttc gccgcgcgcc
     1381 tctaacgccg cggcgatcgc catcatgccg cacatctcgc catgcgcgcc ggcggccggc
     1441 gacatcgcca cggccggcat gccggtcaag gtcttcagcc agtgcgcgag acggtcgatc
     1501 agcgcgagcg cgccctgcac ggtcgagacc ggctgcaagg gatgcaagtc gccgatgccg
     1561 ggcagccgcg ccaccttctc gttgatccgg ggattgtgct tcatggtgca cgaacccagg
     1621 ggatagacgc ccatgtcgat ggcatagttc ttctggctga gccgcgtgta gtgctgcacg
     1681 acctgaggct cgctcagccc cggcaggccg atctcgccgc tgcggcgcaa gccgttcagg
     1741 cggtccttca ccttgggcgg ttccggcagg tcgacgccgc agcggccggc ctggcccatt
     1801 tcgaagatca acggctcctc gatctggagc gcccggttgc cggtgaaggt cgcgggtgcc
     1861 aacgcgaccg tcgtatcggc ggctgcgccg ccgatacgac cttgcgagcg gtcgagcgac
     1921 tggaccatca cagcacctcc ttcagaccgg cgaccagcgg gcccatgccc tgctccgtcg
     1981 cggtctcggt cgcggccagc agcaacaggt tctcgaccgc gggatcgtcc gggatgaggc
     2041 gcgagac
//
LOCUS       DASWGA010000793         3174 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2374577, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000793 DASWGA010000000
VERSION     DASWGA010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3174
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2374577"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..803)
                     /locus_tag="VF991_18520"
     CDS             complement(<1..803)
                     /locus_tag="VF991_18520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558492.1"
                     /translation="MTRNRLLATAAVLALCIGAPAAQAQYSDGTIKIGVLNDRSGTYA
                     DLSGQGSVWAARKAVEDFCAANKCHDKIEILAADHQNKPDIGANIARQWYDVDKVDVI
                     VDVPTSSVVLAVHKITQEKNKVLLVSTGASSDVTGKDCTPNTIHWTYDTWALANGTGQ
                     AIVKTGGDTWFFLTADYAFGHALERDTEAVVVKNGGKVLGKVRHPFPTQDFSSFLLQA
                     QASKAKIIGLANAGADTTNAIKQASEFGLVKGGQKLAGMLVFITDVNALG"
     gene            840..977
                     /locus_tag="VF991_18525"
     CDS             840..977
                     /locus_tag="VF991_18525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558493.1"
                     /translation="MPPAVVRQLNRLELRNIGLTRETPTYAIMEESKAGSRFGLTAAG
                     L"
     gene            1012..1389
                     /locus_tag="VF991_18530"
     CDS             1012..1389
                     /locus_tag="VF991_18530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9558494.1"
                     /translation="MTPSARLDATFAALADPTRRAILARLATGEASVTELARPFDMSQ
                     PAISKHLKVLQRAGLISRGRDAQRRPCHLAAKPLADANEWLERYRQFWEASFERLDSL
                     LEEMKAKEQARAKARRKAKGAKR"
     gene            1386..1904
                     /locus_tag="VF991_18535"
     CDS             1386..1904
                     /locus_tag="VF991_18535"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX9558495.1"
                     /translation="MKYAGTLAIAARGDREIAMTRRFDAPRPMVFEAFTIPGLMKRWM
                     LGPPGTTLPVCEIDFRVGGAYRSVWCDAQGGEMSAAGVYREIDAPRRFVATERFDPPW
                     YPGEALITIDFVEQDGGTEVTTTMRYESTAGRDGVLKTPMAVGITQSYDRLAAILEGN
                     KSGEIERVRKRA"
     gene            1901..3142
                     /locus_tag="VF991_18540"
     CDS             1901..3142
                     /locus_tag="VF991_18540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558496.1"
                     /translation="MTRSHGTAYGWVIVSAGALMTCVGMGTMFSLAVFLQPMSIDTGW
                     TRTGISTAMTIDFLVMGVAAFFWGAISDRYGTRLVVLLGSLLLGTGLVLASRATSLLE
                     FQLLFGVIVGLAAGSFYAPMMAAVTAWFEHNRSLAVSLVSAGMGVAPLTVAPFARWLI
                     TTYEWRPAMLVIGITAWILLIPASLLVRRAPMLATAAAPAPGVATPIASLRVEPAMSV
                     GEALRTPQFAALALAHFACCAAHSGPIFHMVTYAMGCGIPAMAAVSVYGVAGFSGLGG
                     RLLLGVMADRVGAKPVLVVGLMVQALAAGTYLFVAQLGEFYALAIVFGIAYGGVMPLY
                     AILAREYFGVRIMGTTFGAISMAASLGMALGPWAGGWVFDTYTSYAWLYIFSFAIGLA
                     AVAVALTFKPVPAAAKLRMAA"
BASE COUNT          480 a         1044 c         1070 g          580 t
ORIGIN      
        1 ccgagcgcgt tcacgtcggt gatgaagacg agcataccgg cgagcttctg cccgcccttg
       61 acgaggccga actcggacgc ctgcttgatg gcgttggtgg tgtcggcgcc ggcattggcg
      121 aggccgatga tcttggcctt cgaggcctgc gcttgcagca ggaacgagga gaagtcctgg
      181 gtcgggaacg gatggcgcac cttgcccagc accttgccgc cgttcttgac cacgaccgcc
      241 tcggtgtcgc gctccagcgc atggccgaag gcatagtcgg cggtgaggaa gaaccacgtg
      301 tcgccgccgg tcttcacgat cgcctggccg gtgccgttgg ccagcgccca ggtgtcgtag
      361 gtccagtgga tggtattggg cgtgcagtcc ttgcccgtga cgtcggacga ggcgccggtc
      421 gagacgagaa ggaccttgtt cttctcctgg gtgatcttgt gcaccgcgag gacgaccgac
      481 gaggtcggca cgtcgacgat cacgtcgacc ttgtcgacgt cgtaccactg gcgcgcgatg
      541 ttggcgccga tatcgggctt gttctggtgg tcggccgcca agatctcgat cttgtcgtgg
      601 cacttgttgg cggcgcagaa atcctccacc gccttgcgcg cggcccatac cgagccctgg
      661 ccggacaggt cggcataggt gccggagcgg tcgttcagca cgccgatctt gatcgtgccg
      721 tcgctgtatt gcgcctgcgc agccggagcg ccaatgcaca gcgccaggac ggccgccgtt
      781 gccaataacc ggtttctcgt catcttcccc tccctggtga aacgcgacag caggctagcg
      841 tgccgcccgc cgttgttcga cagttgaatc gcctggaact ccgcaatatc ggcctgacgc
      901 gtgaaacgcc cacctatgcg atcatggaag aaagcaaggc cggctcgcgc ttcggtttga
      961 cagcggcagg cctataatat aactttatgg ttatataaca atatggttca catgacgcct
     1021 tcggcccggc tcgacgccac cttcgccgcc ctcgccgacc cgacacggcg ggcgatcctg
     1081 gcgcggctgg cgacgggcga ggcgtcggtc accgagctgg cgcggccctt cgacatgagc
     1141 caaccggcta tctccaagca cctcaaggtg ctgcagcgcg ccggcctgat ctcgcggggc
     1201 cgcgacgccc agcgccggcc ctgccatctc gcggccaagc ccctggccga tgccaacgaa
     1261 tggctcgagc gctaccggca gttctgggaa gcgagcttcg agcgcctcga cagtcttctg
     1321 gaagagatga aagccaagga gcaggcgcgc gccaaagcca ggcgcaaagc gaaaggagcc
     1381 aagcgatgaa atacgccgga accctggcga tcgctgcccg cggcgatcgt gagatcgcca
     1441 tgacccgccg cttcgacgca ccgcggccga tggtgttcga ggccttcacc atacccgggc
     1501 tgatgaagcg ctggatgctc ggtccgccgg gcacgaccct gccggtgtgc gaaatcgatt
     1561 tcagggtggg cggcgcctat cgctcggtct ggtgcgatgc ccaaggcggc gagatgagtg
     1621 cggccggcgt gtatcgcgag atcgacgcgc cgcgccgctt cgtcgccacg gaacgcttcg
     1681 atccaccgtg gtatccgggc gaggcactga tcaccatcga cttcgtcgaa caggacggcg
     1741 gcaccgaagt gacgaccacc atgcgctacg agtcgaccgc aggacgcgac ggcgtgctca
     1801 agacaccgat ggcggtcggc atcacgcaga gctacgatcg gctggcggcg atcctggaag
     1861 gcaacaagtc cggggaaatc gaacgggtac ggaaacgggc atgacgcggt cccatggcac
     1921 ggcgtatggc tgggtgatcg tcagcgctgg cgcgctgatg acctgcgttg gcatgggcac
     1981 gatgttctcg ctggcggtgt tcctccagcc gatgtcgatc gacaccggct ggacacgcac
     2041 cggcatctcg accgccatga cgatcgactt cctggtgatg ggcgtcgccg ccttcttctg
     2101 gggcgcgatc agcgaccgct acggtacccg gctcgtcgtg ctgctgggca gcctgctgct
     2161 gggcacgggc ctagtgctgg ccagccgcgc caccagcctg ctcgagttcc agctcctgtt
     2221 cggcgtgatc gtgggcctcg ccgcgggcag cttctatgcg ccgatgatgg cggcggtcac
     2281 cgcctggttc gagcacaacc gcagcctcgc cgtgtcgctg gtctcggccg gcatgggcgt
     2341 ggcaccgctc accgtggcgc cgttcgcgcg ctggctgatc acgacctacg agtggcggcc
     2401 ggcgatgctg gtgatcggca tcaccgcctg gatcctgttg attccggcct cgctgctggt
     2461 gcgccgcgca cccatgctgg cgacggcggc cgcgcctgct ccgggcgtgg cgacgcccat
     2521 cgcttccctg cgcgtcgagc ccgcgatgag cgtgggcgaa gcgctgcgca cgccgcagtt
     2581 cgccgcgctg gccctcgccc acttcgcctg ctgtgccgcg cattccgggc cgatcttcca
     2641 catggtgacc tacgccatgg gttgcggcat tccggcgatg gcagcggtca gcgtctatgg
     2701 cgtggccggc ttctccgggc tgggcggccg cctgctgctg ggtgtgatgg ccgacagggt
     2761 cggcgccaag ccggttctgg tggtcgggct catggtgcag gccttggcgg ccggcaccta
     2821 tcttttcgtc gcgcagctcg gcgagttcta tgccttggcg atcgtgttcg gcatcgccta
     2881 tggcggcgtg atgccgctct acgccattct ggcgcgcgag tatttcggcg tgcgcatcat
     2941 gggcacgacc ttcggcgcca tctcgatggc ggcaagcctt ggcatggcgc tcggcccatg
     3001 ggccggcggc tgggtgttcg acacctacac cagctacgcc tggctctata tcttctcgtt
     3061 cgccatcggc ctcgccgccg tggcggtggc acttaccttc aagccggtgc cggcggcggc
     3121 caagctcagg atggcggcgt agcgcgtgtg cgcaactcct gtagatcgct gtac
//
LOCUS       DASWGA010000794         3054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1864587, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000794 DASWGA010000000
VERSION     DASWGA010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3054
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1864587"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            273..818
                     /locus_tag="VF991_18545"
     CDS             273..818
                     /locus_tag="VF991_18545"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009760225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX9558497.1"
                     /translation="MRLALTPLFVAISLMFTGATAAMDKENTLYIDLKDGRVVIEMRP
                     DLAPNHVQQIKKLAREGKYDGVVFHRVIEGFMAQTGDPDGTGSGGMGEPLKAEFSKEP
                     HVRGSVSMARTSDPNSARSQFFIVFKDSNFLDGQYTVWGKVVSGMEFVDKIKRGAAGS
                     GAVAAPADKMIKVQVAADAKS"
     gene            complement(942..1322)
                     /locus_tag="VF991_18550"
     CDS             complement(942..1322)
                     /locus_tag="VF991_18550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9558498.1"
                     /translation="MSSDVAAIEQVLKVYFDGLYEGDTKKLGEAFHPAAHLYSAGGDG
                     KAADWPRTDWFKMVDGRPSAKAKGSARADRIVSIDFSGPATAFAKVECQLPPRYFTDY
                     LTLLKVDGRWQIIAKAFHTVTKEG"
     gene            complement(1340..2329)
                     /locus_tag="VF991_18555"
     CDS             complement(1340..2329)
                     /locus_tag="VF991_18555"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HEX9558499.1"
                     /translation="MKQVLIDRYGTPWDVARCADVADVGDPAADEVVFDVLAFPINPA
                     DMWFCKGSYRLKPPLPATPGAECVGRVAAVGAAVKHVKTGDLVINLQRENWAQRRKVK
                     GDDAIPLPAGIDLKQAAMVRINPPTALLMLSDFVDLKPGDWVIQNVANSAVGRLLIVL
                     ARQRGLRTVNVVRRAPLADELKALGADVVVVDGDDLGQRVDKATGDAAIRLGVEAIGG
                     SATGRLADCIATDGTLVHYGSMSGEDPKVGRSNFIYRGVRLTGFMLGRFLGRRSPEKI
                     REIYAELAGQVMAGKLSAPVDTVYPIEKIKEALAHADKGGRSGKILVSPNGAI"
     gene            2437..>3054
                     /locus_tag="VF991_18560"
     CDS             2437..>3054
                     /locus_tag="VF991_18560"
                     /inference="COORDINATES: protein motif:HMM:NF016090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEX9558500.1"
                     /translation="MNSATDSVRAPYRGVADWLARTSPEKVAATRHEVDLFYRRHGIT
                     FGAYGSVDGSETTIPFDIIPRVIAWDEWEFLHKGLTQRVRALNAFLADAYGEREICRA
                     GVIPEQQVLMNAEFVAMAQGLELPGGVHAHIAGIDLVRVGEKDFYVLEDNVRTPSGVS
                     YVLENREVMMRLAPELFSAMRVLPVADYSEELLATLRSVSFSDDAE"
BASE COUNT          510 a         1020 c          979 g          545 t
ORIGIN      
        1 cccgttcctc gccgctcacg gcggtcatcg aacaatccgt taaagaatga cttcccacta
       61 tcgcagccgg accggcaacc cctccgatcg gcccaatcgc gcgcacacct tagccgccgg
      121 tgccgcgcaa actccatggc aaacaatgca cagcctgcgg cgcttcaata gcttatcggc
      181 cctgtcggac ccacaacctg aggtgagcgc ttgtctttcc tgcctcggcc agtatggtcg
      241 cgcccggcct ggtgaagaga gaggattccg tgatgcgtct tgcactgacg cctttgttcg
      301 tcgccatctc actcatgttc acaggagcga cagccgccat ggacaaggaa aacacgctct
      361 atatcgatct caaggacggt cgcgtcgtga tcgagatgcg tcccgacctg gcgcccaacc
      421 acgtccagca gatcaagaag ctggcgcgcg aaggcaaata tgacggtgtc gtcttccatc
      481 gcgtcatcga gggcttcatg gcccagaccg gcgatcccga cggtaccggc tcgggcggca
      541 tgggcgagcc gctcaaggcc gagttctcca aggagccgca cgtgcgcggt tcggtttcga
      601 tggcgcgcac cagcgacccc aacagcgcgc gcagccagtt cttcatcgtg ttcaaggatt
      661 cgaacttcct cgacggccag tacacggtgt ggggcaaggt cgtgtcgggc atggagttcg
      721 tcgacaagat caagcgcggc gccgccggct cgggcgcggt cgcagcgcct gccgacaaga
      781 tgatcaaggt ccaggtcgcg gccgacgcga agagctagaa gctacggaaa tggtgtcatc
      841 ccgagcgtaa gcgagggacc tttaaagccg cagcaaaggt ccctcgctgc gctcgggatg
      901 acaattttgc ctgcggcgag cgtcgtgcgc cgctcgctgt ctcacccttc tttggtcacc
      961 gtgtggaacg ccttggcgat gatctgccag cggccgtcca ctttcagcag cgtcaggtag
     1021 tcggtgaagt agcgcggcgg gagctggcat tcgaccttgg cgaaggcggt cgccgggccg
     1081 gagaagtcga tcgacacgat gcgatcggcg cgtgcgctgc ccttggcctt ggccgacggc
     1141 cggccgtcca ccatcttgaa ccagtcggtg cgcggccagt cggcggcctt gccgtcgccg
     1201 ccggcgctgt agagatgcgc agccggatgg aacgcctcgc cgagcttctt ggtgtcgcct
     1261 tcgtagagac catcgaaata aacttttagc acctgctcga ttgccgcgac gtccgaactc
     1321 atttctcttc ctccctcgtt caaatcgccc cgttggggct caccaggatc ttgccgctgc
     1381 gcccaccctt gtcggcatgg gccagcgcct ccttgatctt ctcgatcgga tagaccgtgt
     1441 cgaccggcgc cgacagcttg cctgccatca cctgcccggc aagctcggca tagatctcgc
     1501 ggatcttctc ggggctgcgt cggcccagaa agcggcccag catgaagccg gtaagcctga
     1561 ccccgcggta gatgaaattg ctgcggccga ccttgggatc ctcgccgctc atcgagccat
     1621 aatggaccag ggtgccgtcg gtggcgatgc aatcggcgag ccgcccggtc gccgagccac
     1681 cgatcgcctc gacgccgagc cggatcgctg catcgcccgt cgccttgtcg accctctggc
     1741 cgaggtcgtc gccgtcaacg accacgacat cggcgccgag cgccttcagc tcgtccgcca
     1801 gtggagctcg ccgcaccacg ttgaccgtgc gcaggccgcg ttgccgggcc agcacgatca
     1861 gcaggcgccc gacggccgag ttggcgacgt tctggatcac ccagtcgccc ggcttgaggt
     1921 cgacgaagtc cgacagcatg agcagcgcgg tcggcggatt gatgcggacc atcgccgcct
     1981 gcttgagatc gatgccggcg ggcagcggga tcgcgtcgtc gcccttgacc ttgcgccgtt
     2041 gggcccagtt ctcccgttgc aggttgatga cgaggtcgcc cgtcttgacg tgcttcaccg
     2101 ccgcgccgac cgccgcgacc cggccgacgc attcggcgcc cggcgtggcg ggcagcggcg
     2161 gcttcagccg atagcttccc ttgcagaacc acatgtcggc cgggttgatg ggaaaggcca
     2221 gcacgtcgaa cacgacctcg tcggcagccg ggtcgccgac gtcggccaca tcggcgcagc
     2281 gcgcgacgtc ccacggcgtt ccgtaacggt cgatcagcac ctgcttcacg cggttcctcc
     2341 gccgcaagtc caaggccact ttgttggccc gtcgattgct tatatggtga ttcgccaggg
     2401 ggtgaaatgc cggaggcggc caaggcattt gacgagatga attcggcaac ggactccgtc
     2461 cgcgcgccgt atcgcggcgt ggccgactgg ctggcgcgga cctcgccgga aaaggtcgcg
     2521 gcgacgcgcc acgaggtcga cctcttctat cgccgccacg gcataacgtt cggtgcctat
     2581 gggtcggtcg acggcagcga gacgacgatc ccgttcgaca tcatcccgcg ggtcatcgcc
     2641 tgggacgaat gggagttcct gcacaagggc ctgacgcagc gcgtgcgcgc gctgaacgcc
     2701 ttcctcgccg acgcctacgg cgagcgcgag atctgccgtg ccggcgtgat ccccgagcag
     2761 caggtgctga tgaacgccga gttcgtcgcc atggcgcagg ggctggaact gccgggcggc
     2821 gtgcatgcgc atatcgccgg catcgacctg gtgcgcgtcg gcgagaagga cttttatgtc
     2881 ctggaagaca acgtgcgcac gccgtcgggc gtgtcctacg tgctggagaa ccgcgaggtc
     2941 atgatgcggc tggcgcccga gctgttctcg gccatgcgcg tgctgccggt cgccgactac
     3001 tccgaagagc ttttggcgac cctgcgctcg gtgtcgttca gcgacgacgc cgag
//
LOCUS       DASWGA010000795         3445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1745992, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000795 DASWGA010000000
VERSION     DASWGA010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3445
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1745992"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..420)
                     /locus_tag="VF991_18565"
     CDS             complement(<1..420)
                     /locus_tag="VF991_18565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011982731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX9558501.1"
                     /translation="MQMPPLDPAILARRSEIVAALRAIVPAEGVIDETDGMRPYECDA
                     LSAYRQMPLVVVLPETVAQVSSILRYCQDNKVKVVPRGAGTSLSGGAMPVGDAILLGL
                     GKFSRVLEIDYANRCARVQPGVTNLGISKAVEHEGFYY"
     gene            complement(509..634)
                     /gene="ykgO"
                     /locus_tag="VF991_18570"
     CDS             complement(509..634)
                     /gene="ykgO"
                     /locus_tag="VF991_18570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012177066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEX9558502.1"
                     /translation="MKIRHSLKSVKARHKDSRIVRRKGRVYVINKTNPRFKARQG"
     gene            810..1811
                     /locus_tag="VF991_18575"
     CDS             810..1811
                     /locus_tag="VF991_18575"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558503.1"
                     /translation="MVTIYRRRLLAHATITTVLGVGLGPSRASAQATPFPARPIRILV
                     GFAAGGGNDVIARILAQKLSEGPLGPVLVDNRTGASGLIAADMLAKAPPDGTTLMVAS
                     QTTYAVAPVLYKSATFDAQRDVAGVAMLGASPLVLVANPSFAAKSVQELIDMAKARPG
                     TINFASGGVGTTPHMAAELFLFNAGIRMTHVSYRGEAPAIADVLAGQLPLVFANVSVV
                     TGQVKAGALRALAVTSPKRAPSLPDVPTLAESGVQGADVETWFGLTAPAATPREIVQR
                     LNAEVLKALATPDLQRRFSELSLSVDPSTPEELDAKIKSEAVRWAEVIRRAGIRAVD"
     gene            1883..2164
                     /locus_tag="VF991_18580"
     CDS             1883..2164
                     /locus_tag="VF991_18580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051983 - regulation of chromosome
                     segregation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HEX9558504.1"
                     /translation="MPKVSKRTFSLPAEHAAFIDAKVSSGAYASGSEVVRAGLRALQE
                     RDAAMERWLHDEVAPTYDAMKENPKRGLPAKSVFAEARARFAGRRKARR"
     gene            2179..2457
                     /locus_tag="VF991_18585"
     CDS             2179..2457
                     /locus_tag="VF991_18585"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX9558505.1"
                     /translation="MFSPEARADLLCLLDWIAERAGNKVALAYINRLEAYCQGFEFAS
                     ERGHRRDDIRPGLRVVGFERRVAITFTVDPLEVTILRLYYGGRDLKPG"
     gene            2555..>3445
                     /locus_tag="VF991_18590"
     CDS             2555..>3445
                     /locus_tag="VF991_18590"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX9558506.1"
                     /translation="MAERYDPIALELFKNAIFSIADEMALTVFRTTYSGVLKDNMDYS
                     TGFADADGKLAAQGLTLPGHLGSVPTAMEAIMRHFRDDMAPGDVFIMNDPFDGGMHLP
                     DIFVFKPLYHQGERLGFACTVCHHIDVGGRVAGSNASDSTEIYAEGLRIAPMKLYEAG
                     KLNQTIMTFIEKNVRLPVQLFGDLRAQLAACHIGEKQFAEIVARYGPQQTKSYLREVI
                     DYAERLTRAALAELPDGEWSFEDWIDDDGVDYGQPIRLFVTIRKTGGHMVVDWTGTNP
                     QVKGAINNTLSFTKAASYTGV"
BASE COUNT          612 a         1144 c         1093 g          596 t
ORIGIN      
        1 gtagtagaag ccttcgtgct cgaccgcctt ggagatgccg aggttagtga ccccgggctg
       61 cacgcgggcg caacggttgg cgtagtcgat ctcgagcacg cggctgaact tgcccaggcc
      121 cagcaggatg gcgtcgccca cgggcatggc gccgcccgac agcgacgtgc cggcgccgcg
      181 cggcacgacc ttgaccttgt tgtcctggca atagcgcagg atggaagaga cctgggccac
      241 cgtctcgggc agcacgacca cgagcggcat ctggcggtag gccgacagcg cgtcgcattc
      301 gtagggacgc atgccgtcag tttcgtcgat cacgccctcg gccggcacga tggcgcgcag
      361 cgcggccacg atctccgacc ggcgggccag gatggcggga tcgagcggcg gcatttgcat
      421 gcttcggtca tacgccaaat gaaaaagcgg cggaagccga agccccgccg cccctattgg
      481 tccagaacgt ccgtcccgga cgcttgagtc agccctggcg ggccttgaag cgcgggttgg
      541 tcttgttgat gacgtagacg cggcccttgc ggcgcacgat gcggctgtcc ttgtggcgag
      601 ccttcacgga cttgagggaa tggcggatct tcatggttct tctcaacaaa agccccggcc
      661 gagccggggg aatctttaaa gcgggcggaa aatagggacc tgggacgctg ccgtcaaccc
      721 ttcgactggc ggcaaatccc ccaatgatct gaacgacttc tggccaatcc ggggtagatt
      781 gcccgggccc gcacccaggg agcggcttca tggtcacgat ataccgccga cgcctgctcg
      841 cccacgcgac gatcaccact gtgctcggcg tgggactcgg cccgtcgcgc gcctcagccc
      901 aggccacgcc cttccctgcc cgtccgatcc gtatcctggt ggggttcgcc gccggcggcg
      961 gcaacgacgt gatcgcccgc atcctggcgc aaaaactgtc ggaaggccca ctcggccccg
     1021 tgctggtcga caatcgcacc ggcgcgagcg gcctgatcgc cgccgatatg ctggccaagg
     1081 cgccgcccga tggcaccacc ctgatggtgg cctcgcagac gacctacgcg gtggcgcccg
     1141 tgctctacaa gtcggcgacc ttcgacgccc agcgcgacgt cgcgggtgtg gccatgctcg
     1201 gggcctcgcc attggtgctg gtcgccaacc cgtcatttgc cgccaagtca gtgcaggagc
     1261 tgatcgacat ggccaaggct cggccgggca cgatcaactt cgcctcgggc ggcgtcggca
     1321 cgacgccgca catggcggcc gagctgttcc tgttcaatgc cggcatccgc atgacccacg
     1381 tctcctaccg cggcgaggca cccgccatcg ccgacgtgct ggccgggcaa ttgccgctgg
     1441 tgttcgccaa cgtctcggtg gtgaccggcc aggtgaaggc gggcgcgctg cgagcgcttg
     1501 ccgtcacctc gcccaagcgc gcaccgagcc tgcccgacgt tccgacgctc gccgagtcag
     1561 gcgtgcaagg agccgacgtc gagacgtggt tcggcctcac tgcgcccgcc gcgacgccgc
     1621 gcgagatcgt gcaacgcctc aacgccgagg tcctgaaggc gctggcgacg cccgatcttc
     1681 aacggcgttt cagcgagctc agcctgtcgg tcgatcccag cacgccggaa gagctcgatg
     1741 ccaagatcaa gtcggaggcc gtgcgctggg ccgaggtgat ccgccgcgcc ggcattcgcg
     1801 cggtcgactg aggggcttct acgacatcga catcaagcgg tcatcgatgg tatgatttgg
     1861 tcatacccct gcaggaatgg acatgccgaa agtctcgaag cgaactttta gcctgccggc
     1921 cgagcacgcc gccttcatcg acgcaaaagt gtcgtcgggc gcctacgcct cgggcagcga
     1981 agtcgtccgc gccggcctgc gcgccctcca ggaacgcgac gcagcgatgg agcgatggct
     2041 gcacgatgaa gtggcgccga cctacgacgc catgaaggaa aatcccaagc gtggattgcc
     2101 cgccaaatcg gtatttgccg aagcccgcgc tcgctttgct ggtcgtcgca aggcgcgtcg
     2161 ttgaaacgtc gaacggtcgt gttttcgccc gaagcgcggg ctgatctcct atgcctgctc
     2221 gactggatag cagagcgagc gggaaacaaa gtagccttgg catacatcaa ccgactggag
     2281 gcttactgtc agggtttcga gttcgcctct gaacgcggac atcgccggga tgacattcgt
     2341 ccgggccttc gcgttgtcgg cttcgaacgt cgagtggcta tcactttcac tgttgaccct
     2401 ttggaagtga caattttgcg cctctactac ggtggccgtg acttgaaacc cggttaactg
     2461 ttatgcgccg ctcgacgaat ctgccgagat gcatgacact cggcacggct attgcgtcgc
     2521 cgggtaggtc cgtatgagca agggagagtc gaaagtggcc gagcgttacg atccgatcgc
     2581 gctggagcta ttcaagaacg cgatcttctc gattgccgac gaaatggcgc tcacggtctt
     2641 tcgcacgacc tattccggcg tgctcaagga caacatggac tattcgacgg gcttcgccga
     2701 tgccgacggc aagctcgccg cgcagggcct gaccttgccg ggccatctcg gctcggtgcc
     2761 gacggcgatg gaagcgatca tgcgtcactt ccgcgacgac atggcgccgg gcgacgtctt
     2821 cattatgaac gacccgttcg acggcggcat gcacctgccc gacatcttcg tcttcaagcc
     2881 gctctatcac cagggtgagc ggttgggctt cgcctgcacg gtctgccatc acatcgatgt
     2941 cggcggccgc gtcgccggat cgaatgcctc cgattcgacc gagatctacg ccgagggcct
     3001 gcgcatcgcg ccgatgaaac tctacgaggc cggcaagctc aaccagacca tcatgacgtt
     3061 catcgagaag aacgtccgcc tgccggtcca gctgttcggc gacctgcgcg cccagctcgc
     3121 cgcctgccac atcggcgaaa agcagtttgc cgagatcgtc gcccgttacg gcccgcagca
     3181 gaccaagtcc tacctcaggg aagtcatcga ctatgccgag cggctgacgc gcgccgcgct
     3241 cgccgagctg cccgacggcg aatggagctt cgaggactgg atcgacgacg acggcgtcga
     3301 ttacggccag ccgatccgcc tgttcgtcac catccgcaag accggcggtc acatggtggt
     3361 cgactggacc ggcaccaacc cgcaggtcaa gggcgcgatc aacaacaccc tgtcgttcac
     3421 caaggccgct tcctacaccg gcgtg
//
LOCUS       DASWGA010000796         2335 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_616333, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000796 DASWGA010000000
VERSION     DASWGA010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_616333"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..803)
                     /locus_tag="VF991_18595"
     CDS             complement(<1..803)
                     /locus_tag="VF991_18595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /protein_id="HEX9558507.1"
                     /translation="MTGQSTTPLLDKVDIPADIRRLRADQLRQLADELRQETISAVSV
                     TGGHLGAGLGVVELTVALHYVFDTPKDRLIWDVGHQAYPHKIVTGRRGRIRTLRQEGG
                     LSGFTRRSESEYDPFGAAHSSTSISSGLGMAVARDLAGGSNHVVAVTGDGAMSAGMAY
                     EAMNNAGALRSRLIVVLNDNDMSIAPPVGAMSAHLSRLLSGRPYVTLRNLGRTVAEAL
                     PKPLELAAKRAEEFARGLVAGGTLFEELGFYYVGPVDGHNLDHLLPVLK"
     gene            complement(831..1751)
                     /locus_tag="VF991_18600"
     CDS             complement(831..1751)
                     /locus_tag="VF991_18600"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004337 - geranyltranstransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="farnesyl diphosphate synthase"
                     /protein_id="HEX9558508.1"
                     /translation="MPLSSHRRFDAALVHAAQSVERTMDRLLPHSFPGDDTGEARVFD
                     AMRYSSLEGGKRLRAFFVLAGATLFKVAALSAFRTASAIEFVHAYSLIHDDLPAMDDD
                     DLRRGKPSCHKQFDEATAILAGDALQALAFEVLAHEDTHGDPAVRAALVAELAKAAGA
                     HGMVGGQMLDLLAEGQGPDMSIGAITRLQRLKTGALISFSCTSGAILGKASEPMRAAL
                     AAYAHDLGLAFQIVDDLLDIEGSAAELGKTPGKDEAAGKATFVSILGKERARAQADLL
                     ARQAAAHLEPFGGAADLLKQAAEFVVARRT"
     gene            complement(1766..2020)
                     /locus_tag="VF991_18605"
     CDS             complement(1766..2020)
                     /locus_tag="VF991_18605"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002963588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEX9558509.1"
                     /translation="MAKEPTLPKDIAALSFEDALKELEGIVQQLERGQVKLDEAITAY
                     ERGALLKKHCEQKLAEAKMKVDKIVFSADGTVGSQPADLG"
     gene            complement(2081..>2335)
                     /locus_tag="VF991_18610"
     CDS             complement(2081..>2335)
                     /locus_tag="VF991_18610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558510.1"
                     /translation="LDRALEGRGSRDEMADVAHERSPVNGRLFRCGAERAIASPLPQC
                     AGRGFDLRTCKAAMSQVRESLSTVEKARIIARNRAFCGLP"
BASE COUNT          395 a          801 c          759 g          380 t
ORIGIN      
        1 ttcttcagca ccggcagcag atggtcgaga ttgtgcccat cgaccgggcc gacatagtag
       61 aagcccaatt cctcgaacag cgtgcctccg gccaccaagc cgcgcgcgaa ttcctcggcg
      121 cgcttggccg ccagttcgag cggcttgggc agcgcctcgg cgacggtgcg gccgagattg
      181 cgcaaggtga cgtaaggccg tccggacaag agccgcgaca ggtgagccga catggcgccg
      241 accggcggcg cgatcgacat gtcgttgtcg ttcaacacca cgatcaatcg gctgcgcagt
      301 gcgccggcgt tgttcatcgc ctcgtaggcc atgccggcgc tcatggcgcc gtcgccggtc
      361 acggcgacca cgtggttgct gccgccggcc aaatcgcgcg ccacggccat gcccaggccg
      421 gacgagatcg aggtcgagga atgcgccgcg ccgaacgggt catattcgct ttcgctgcgg
      481 cgggtgaagc ccgacaagcc gccctcctgg cgcaaggtgc ggatgcggcc gcgccgtccg
      541 gtgacgatct tgtgcggata ggcctggtgg ccgacgtccc agatcagccg gtccttcggc
      601 gtgtcgaaca cgtagtgcag cgccaccgtg agctcgacca cgcccagccc ggcgccgaga
      661 tggccgccgg tcaccgacac ggccgagatc gtctcctggc gcagctcgtc ggccagttga
      721 cgcaattggt cggcgcgcag ccgacggatg tcggccggaa tgtcgacttt atcgagaagc
      781 ggcgtcgtgc tctgcccggt catgacacta ctatactccc gcgcgacggc tcacgtccgt
      841 cgcgcaacca cgaattcagc cgcctgcttt agcaaatccg ccgccccgcc gaacggttcg
      901 agatgcgcgg cggcctgtcg cgccaaaagg tcggcctggg cgcgggcgcg ctccttgccg
      961 aggatcgaca cgaaggtggc cttgcccgcc gcctcgtcct tgcccggggt cttgccaagc
     1021 tcggccgcac tgccctcgat gtccaaaagg tcgtcgacga tctgaaaggc caggccgaga
     1081 tcgtgggcat aggccgccag cgccgcccgc atgggctcgc tcgccttgcc caggatcgcc
     1141 cccgatgtgc aggagaagga gatcagcgcg ccggtcttca gccgctgcag gcgagtgatg
     1201 gcgccgatcg acatgtccgg cccctggcct tcggccaaaa ggtcgagcat ctggccgccc
     1261 accatgccgt gcgcgccggc tgccttggca agctcggcga ccagggcggc gcgcaccgcg
     1321 ggatcgccgt gcgtatcctc atgcgccagc acttcgaagg ccagcgcctg cagggcatcg
     1381 cccgccagga tggccgtggc ctcgtcgaac tgcttgtggc aggacggctt gccgcgccgc
     1441 aggtcgtcgt cgtccatcgc cggcaggtcg tcgtggatca gcgaataggc gtgcacgaat
     1501 tcaatggcgc tggcggttct gaacgccgac aacgcggcga ccttgaacaa cgtcgccccg
     1561 gccagcacga aaaacgcccg caaccgcttg ccgccctcga ggctcgaata gcgcatggcg
     1621 tcgaacacgc gcgcctctcc cgtgtcgtcg cctggaaagg aatgcggcaa caggcgatcc
     1681 atggtgcgct cgaccgactg ggcggcatgc accaacgcgg cgtcgaaccg gcgatgtgac
     1741 gacagcggca tgacggcagg gaagactaac cgagatcggc gggctggctg ccgaccgtgc
     1801 cgtcggccga gaacacgatc ttatcgacct tcatcttggc ctcggcgagt ttctgctcgc
     1861 agtgcttctt caggagcgcc ccgcgctcgt aagccgtgat cgcctcgtcg agcttcacct
     1921 ggccgcgttc gagctgctgg acgatgccct cgagctcctt cagcgcgtcc tcgaaagaca
     1981 gtgcggcgat atccttgggc agggtcggtt ctttggccaa ttgcgcctct cagggggtgt
     2041 agcccgatgg tacccaaccc cggcggccgg ggccagccgg tcacggaagg ccgcaaaatg
     2101 cccgattccg cgcgatgatt cgcgctttct caactgtgga tagcgattca cgcacctgcg
     2161 acatggccgc tttgcatgtt cgcaggtcaa aaccccggcc cgcgcattgc ggcagtggcg
     2221 atgcaatggc acgttccgcc ccgcaacgaa ataaacggcc attcacagga gaacgctcat
     2281 gggcaacgtc agccatctcg tcacgcgaac cgcggccttc cagagctcgg tcgag
//
LOCUS       DASWGA010000797         2280 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2233031, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000797 DASWGA010000000
VERSION     DASWGA010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2233031"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1208)
                     /locus_tag="VF991_18615"
     CDS             complement(<1..1208)
                     /locus_tag="VF991_18615"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEX9558511.1"
                     /translation="MNPIAAAVFAVVLIVAVALFGRRAILIYRLIRMGKPAARFDDIR
                     GRARTEAVVVIGQSKLLQRLLPGLMHAAIFWGFIVLLPTIAIAMIGVVDQHATLPWLG
                     RQGWYALLVDVFAALVLAGVITAFVIRKVQRPRRFAGSHVREADLILLLIAGIVVSLF
                     LWHASQIALGINEYPAVWAPISSLIAQGLHHPWTPYLERAAVWAHVLFILAFLVYLPY
                     SKHLHIFVAAINVFFGRTRARGRLEPINFETPTDADVRFGAATAADLTWKQMLDTVSC
                     TECGRCQDVCPAYNTGKELSPKLLIMALRDQLLSGASTPLVPNAVTDNVVWDCVTCGA
                     CVRECPVGIEHIDHIVDLRRNLVMVESRFPNEAATMLRDVDRAANPWGKPQSDRAHWA
                     DGLGVRVLNAG"
     gene            complement(1205..2077)
                     /locus_tag="VF991_18620"
     CDS             complement(1205..2077)
                     /locus_tag="VF991_18620"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEX9558512.1"
                     /translation="MTVLVLMENNDASLQMLTVARKFGQPLRSVPMDAIQPFAPDAIA
                     AILARAANELAVSSVFAAGTDRGNDVIARLAARSGLPFAANCIAAEPGDPVGVVRQRW
                     GGSLLEHALLRGPRALITVAPHTVRVTEGPAPIDVDLKPYLAQIEPADLVVQVKGHVD
                     GAGGGVSLAEAKVVVSGGRGVGSKEGFAIIEELAGLLGGAVGCSRVVTSAGWRPHSDQ
                     VGQTGTKIAPELYIACGISGATQHMAGCKGAKRILAINVDAEAPIMQNADYAVVGDLK
                     EIVPAISAEIRKTR"
     gene            complement(2074..>2280)
                     /locus_tag="VF991_18625"
     CDS             complement(2074..>2280)
                     /locus_tag="VF991_18625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558513.1"
                     /translation="LPRYPSVPGRMRAGRKPIATSTPTRPPVRLELVRLEVPPGQGRR
                     AEALGNGAAAAPAVVEMLRSVGVL"
BASE COUNT          393 a          758 c          789 g          340 t
ORIGIN      
        1 ccggcattga gcacgcgaac gccaaggccg tccgcccaat gggcgcggtc cgactgcggc
       61 ttgccccatg ggttggccgc ccgatcgacg tcgcgcagca tcgtcgccgc ctcgttggga
      121 aaacgcgact cgaccatgac caggttgcgt cggaggtcga cgatatggtc gatgtgctcg
      181 atccccaccg ggcattcgcg cacacacgcg ccgcaggtga cgcagtccca cacgacgttg
      241 tcggtgaccg cgttgggcac gagtggcgtt gacgcgccgc tcaagagctg gtcgcgcagc
      301 gccatgatca aaagcttcgg cgacagctct ttgccggtgt tgtaagcagg gcacacgtcc
      361 tggcaccggc cgcactcggt gcaggacacg gtgtcgagca tctgcttcca ggtgaggtcg
      421 gctgccgtgg cggcgccgaa tcggacatcc gcgtccgtgg gcgtttcgaa gttgatcggc
      481 tccagccgcc cgcgcgcgcg cgtgcggccg aagaaaacgt taatggccgc gacgaagatg
      541 tggaggtgtt tcgagtacgg caggtagacc aggaaggcga ggatgaacag cacgtgcgcc
      601 cacaccgcgg cgcgctcgag gtagggcgtc catgggtgat ggagcccctg agcaatcaag
      661 ctcgagatcg gagcccatac cgctggatac tcgttgatgc caagagcgat ctggctcgcg
      721 tgccacagga agagcgacac gacgatgccg gcgatcagca gcaggatgag gtcggcctca
      781 cgaacgtggc tgcccgcgaa gcgtcgcggg cgctgcacct tgcggatcac gaaagcggtg
      841 atcacgcccg cgagcaccag cgccgcgaag acgtcgacca gcagcgcgta ccagccctgg
      901 cggccgagcc acggcagcgt cgcgtgctgg tcgacgacgc cgatcatggc gatggcgatg
      961 gtcgggagca gcacgatgaa gccccagaag attgcggcgt gcatgaggcc gggcaggagc
     1021 cgctgcagca gcttgctctg tccgatgacg actactgctt cggtccgcgc ccgaccccgg
     1081 atgtcgtcga atcgcgctgc gggcttgccc atacggatga gccggtagat caggatcgcc
     1141 cggcgcccga acagcgcgac cgccacgatc agcacgacgg cgaaaaccgc ggcggcgatc
     1201 gggttcacct ggttttccgg atctcggccg agatggccgg cacgatctcc ttgaggtcgc
     1261 cgaccaccgc gtagtcggcg ttctgcatga tcggcgcctc ggcgtcgacg ttgatggcga
     1321 ggatgcgttt cgcgcccttg cagccggcca tgtgctgggt ggccccggag ataccacacg
     1381 cgatgtacag ctcgggagcg atcttggtgc cggtctgccc gacctggtcg gagtgcggcc
     1441 gccagccggc gcttgtgacc acacgcgaac agccgaccgc gccgcccagc aagccggcca
     1501 gctcctcgat gatcgcgaag ccctccttgg agccaacccc gcggccaccg ctgacgacga
     1561 ccttcgcctc ggcaagcgaa acgccaccgc cggcgccgtc gacgtggcct ttgacttgca
     1621 ccacgaggtc cgcgggttcg atctgcgcca gatagggctt caggtcgacg tcgatgggcg
     1681 ccgggccctc ggtcacgcga acggtgtgcg gggcaacggt gatcagggca cgaggacctc
     1741 ggagcagcgc gtgctcgagc aggctgccac cccatcgctg gcggacgacc cccaccgggt
     1801 cgcctggctc ggccgcgatg cagttggcgg cgaagggtag gccgctgcgt gccgccagcc
     1861 gcgcgatgac gtcattgcca cgatccgtgc ccgccgcgaa cactgatgac acggccagct
     1921 cgttagcggc tcgggcaagg atggccgcga tggcgtcggg cgcaaacggc tgaatcgcgt
     1981 ccattggaac gctgcgcaac ggttggccga acttgcgggc gaccgtgagc atctggagcg
     2041 aagcgtcgtt gttctccatc aggacaagaa cggtcacaaa acacccacac ttcgcagcat
     2101 ctcgaccaca gccggtgcgg ccgccgcccc gttgcccaac gcctcggcgc gcctgccctg
     2161 gccgggcggc acctcgaggc gcacgagttc aaggcgcacc ggtgggcgcg tcggcgtcga
     2221 agtcgcgatc ggtttgcggc cggcgcgcat gcggccgggc accgatggat atcgcggcag
//
LOCUS       DASWGA010000798         3022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1865080, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000798 DASWGA010000000
VERSION     DASWGA010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1865080"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1186
                     /locus_tag="VF991_18630"
     CDS             <1..1186
                     /locus_tag="VF991_18630"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR01349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex dihydrolipoamide
                     acetyltransferase"
                     /protein_id="HEX9558514.1"
                     /translation="DEGKIGQIVVPEGAEGIAVNAVIAILLEEGETSVPAGAAPAPAA
                     KPAAAPAPPAAPKPVPAAPAAAAQAPAAQAAVAPAPAAAAPAAKPATAPSGGRIFASP
                     LAKRIAAEKGLDLSNIKGSGPNGRIVKADVESAKPGAAPAAAPVAVGAPRPAPPSGGQ
                     PVFVAPGDTRVPHTAVRKVIARRMLESKQTVPHFYLTVDLEIDALLAARQAINAVAEK
                     KGTKVSVNDMVIKACAKALRDHPECNASWTEDEMILYGAVDISVAVATERGLITPIVR
                     NADMKGLAQIAAEMKDLAARAKTGKLKLDEFQGGGFTISNLGMFGINSFAAIINPPQA
                     MILAVGVGEERPVVRKGQVVVRNMMSCTLAVDHRAVDGAMGAQFLQTLRGYIEQPAAM
                     LV"
     gene            1198..2610
                     /gene="lpdA"
                     /locus_tag="VF991_18635"
     CDS             1198..2610
                     /gene="lpdA"
                     /locus_tag="VF991_18635"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX9558515.1"
                     /translation="MAETSFDIIIVGGGPGGYVAAIRAAQLGMKAAVVERENMGGICL
                     NWGCIPTKALLRTSEVYDLIKHADSFGLSVKDVAYDAKKIVERSRKVANQLSNGVKGL
                     MRKNKITVFEGSAKLAGNDGGQRKLAVAMNDKSNLTLTAKNVILATGARARQLPGLES
                     DGKLVWTYREAMVPPEFPKSLLVIGSGAIGIEFASFYRTMGAEVTVAEVVDRILPVED
                     EEVSAFAKRQFEKQGMKILTGATVGNLKKANDKVTATITAGAKSQEITVDRVISAVGI
                     VGNVEDLGLEGTKVKVDKTHIVIDQWGLTGEPNVYAIGDVAGPPWLAHKAMHEGVVVV
                     EKIAGVKGVHPLNTANIPGCTYCQPQVASIGLTEAAAKAKGLQVKVGKFPFIGNGKAI
                     ALGEPEGFVKTVFDAKTGELLGAHMIGAEVTELIQGYSIAKTLETTEAELMATVFPHP
                     TLSEMMHEAVLAAYGRTLHI"
     gene            2617..>3022
                     /locus_tag="VF991_18640"
     CDS             2617..>3022
                     /locus_tag="VF991_18640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007693464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEX9558516.1"
                     /translation="MDGTFDKPPLSRAERHPEKAHRPDNPIRRKPDWIRVRAPNSPEY
                     AETKRLMRQYGLTTVCEEAACPNIGECWKHKHATFMIMGEVCTRACAFCNVATGKPGA
                     LNPHEPANIAEAVGKLGLGHVVVTSVDRDDLLD"
BASE COUNT          558 a         1012 c         1018 g          434 t
ORIGIN      
        1 cgacgaaggc aagatcggcc agatcgtcgt gccggaaggc gccgagggga tcgcggtcaa
       61 cgccgtgatc gcgatcctgc tggaggaggg tgagacttcc gtgccagccg gcgcagcgcc
      121 cgctccggct gccaaacccg ctgccgcgcc agcgccgccg gcggccccca agcctgttcc
      181 ggccgcacct gccgctgcag ctcaggcccc tgcagctcag gccgctgtag ccccggcgcc
      241 tgccgcagcg gcgcccgcag cgaagccggc gacggcaccg agcggcggcc gcatcttcgc
      301 ctcgccgctc gccaagcgca tcgccgcgga gaaggggctc gatctctcca acatcaaggg
      361 cagcgggccg aacggccgca tcgtcaaggc ggacgtcgag tccgccaagc cgggtgcggc
      421 gcccgccgcc gctcccgttg cggtcggggc gcccaggccc gcaccaccgt ccggcgggca
      481 gccggtgttc gtggcgccgg gcgacacgcg cgtgccgcac accgcggtcc gcaaggtgat
      541 tgcacggcgc atgctcgagt ccaagcagac cgtgccgcac ttctacctga cggtggactt
      601 ggagatcgat gcgctgctgg ccgcgcgcca ggcgatcaat gcggtggccg agaagaaggg
      661 caccaaggtc tcggtcaacg acatggtgat caaggcctgc gctaaggcgt tgcgcgacca
      721 tcccgagtgc aacgcctcgt ggaccgagga cgagatgatc ctgtacggcg cggtcgacat
      781 ttcggtcgcc gtcgccaccg agcgcggcct gatcacgccg atcgtgcgca atgccgacat
      841 gaagggcctg gcgcagatcg cggcggagat gaaggacctc gccgcccgcg ccaagaccgg
      901 caagctcaag ctcgacgagt tccaaggcgg cggcttcacc atctccaatc tcggcatgtt
      961 cggcatcaac agctttgccg ccatcatcaa cccgccgcag gcgatgatcc tcgccgtcgg
     1021 cgtgggggag gagcggccgg tggtgcgcaa gggccaggtg gtggtgcgca acatgatgag
     1081 ctgcaccttg gcggtcgacc atcgtgcggt cgacggtgcg atgggcgcgc agttcctcca
     1141 gacgctgcgc ggctatatcg agcagccggc cgcgatgctg gtgtaggagt acccgcgatg
     1201 gccgagacga gcttcgacat cattattgtc ggcggcggac ccggcggcta tgtcgccgcc
     1261 atccgtgccg cccagcttgg catgaaggcc gccgtcgtcg agcgcgagaa tatgggcggc
     1321 atctgcctca actggggctg tatcccgacc aaggcgttgc tgcgcacctc cgaggtctac
     1381 gacctgatca agcacgccga ttccttcggc ctgtcggtca aggacgtcgc ctatgatgcc
     1441 aagaagatcg tcgagcgctc gcgcaaggtc gcgaaccagc tcagcaacgg cgtcaaaggc
     1501 ctgatgagga agaacaagat cacggtgttc gagggcagcg ccaagctcgc cggcaacgac
     1561 ggcggccagc gcaagcttgc ggtggcgatg aacgacaaga gcaacctgac cttgacggcc
     1621 aagaacgtga tcctggcgac cggcgcgcgc gcgcgccagc ttcccggcct ggagtccgac
     1681 ggcaagctcg tctggactta tcgggaagcg atggtgccgc cggagttccc caagtctctg
     1741 ctggtgattg gctcgggcgc gatcggcatc gagttcgcga gcttctaccg cacgatgggc
     1801 gccgaggtga cggtggccga ggtggtcgac cgcatccttc ccgtcgagga cgaggaggtc
     1861 tccgccttcg ccaagcggca gttcgagaag cagggcatga agatcctgac cggcgccacg
     1921 gtcggcaact tgaagaaggc caacgacaag gtgacggcca ccatcacggc cggcgccaag
     1981 agccaggaga tcaccgtcga tcgcgtcatc agcgccgtcg gcatcgtcgg caatgtcgaa
     2041 gatttgggcc tcgaaggcac caaggtgaaa gtcgacaaga cccacatcgt gatcgaccag
     2101 tggggcctca ccggcgagcc caatgtctac gccatcggcg acgtcgcggg cccgccgtgg
     2161 ctcgcccaca aggcgatgca cgagggcgtg gtggtggtcg agaagatcgc gggcgtaaag
     2221 ggcgttcacc cgctgaacac cgccaacatc ccgggctgca cctattgcca gccgcaggtc
     2281 gccagcatcg gcctcaccga ggcggcggcc aaggccaagg ggctgcaggt caaggtcggc
     2341 aagttcccct tcatcggcaa cggcaaggcg atcgcgctcg gcgagcccga gggcttcgtc
     2401 aagaccgtgt tcgacgccaa gaccggcgag cttttgggcg cccatatgat cggtgcggaa
     2461 gtcaccgaac tgatccaggg ctacagcatc gccaagacgc tcgaaaccac cgaggccgag
     2521 ctgatggcca cggtgttccc gcaccctacg ctctcggaaa tgatgcacga ggcggtactg
     2581 gcggcctacg ggcgcacgct ccatatctag gccgcgatgg acggcacctt cgacaagccc
     2641 ccgctgagcc gcgccgaacg ccaccccgag aaggcgcacc ggccggacaa tcccatccgg
     2701 cgcaagccgg attggatcag ggtgcgtgcg ccaaactcgc cggaatatgc cgagaccaaa
     2761 cgcctgatgc gtcagtacgg cctgaccacg gtgtgcgagg aggcggcctg ccccaatatc
     2821 ggcgagtgct ggaagcacaa gcacgcgacc ttcatgatca tgggcgaggt ctgcacgcgg
     2881 gcctgcgctt tttgcaacgt cgccaccggc aagccgggcg cgctcaaccc gcacgagccg
     2941 gccaacatcg ccgaagcggt cggcaagctc gggctcggcc acgtcgtggt gacctcggtc
     3001 gatcgcgacg accttttgga tg
//
LOCUS       DASWGA010000799         2521 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1746206, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000799 DASWGA010000000
VERSION     DASWGA010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1746206"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..745)
                     /locus_tag="VF991_18645"
     CDS             complement(<1..745)
                     /locus_tag="VF991_18645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9558517.1"
                     /translation="MTNDLWKLTAVEAVALLKKREISPLDLVEASAKRIADVEPAVNA
                     LPTLCLDRARDHAKRIMAGKSCEAAGEAGWLAGLPVSIKDLADVAGVRTTYGSPLFAD
                     HVPAKSHPLVERIERKGGIVVAKSNTPEFGAGGSTFNEVFGRTRNPWNTSLTCGGSTG
                     GGAVSLATGEVWLAHGSDHGGSLRRPGTYCSVVGLRPSPGRVTRGTSNNLYLPLSVQG
                     PMARTVSDLALFLDTMAGLDLQDPMTFDAP"
     gene            complement(752..1963)
                     /locus_tag="VF991_18650"
     CDS             complement(752..1963)
                     /locus_tag="VF991_18650"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558518.1"
                     /translation="MAATGLSHRVDSPYAWRLAFVSMFCIGLGGGAIYLPVVGLREIA
                     AEFGDRRAVPSMAYMLGFFAMGVGGVMMGWLADRTSPRVPLLIAGASIFAGGWLASSG
                     GELALYVGYMIPLGFLGNAATFTPAMNNIQGWFDRRRSTAVSIISVGPAVSGFVWPQV
                     YRWLLPDVGWRETLVIYGVVAGTLLFLCAFYVRPSPVVRRVGKRAAEDLSVLRLPSLA
                     IMGLLSAAGFCCCVAMAIPFVHMVAFCGDLGFAAARGSEAVSLVLLTAVASTFAMGRL
                     ADYIGPIRVSLLCAVIQIASLLGFVFVQSLSGIYTLSVIHGIPYIAIVQGYALILRQL
                     YGPAIAGWRLGVVMLFAMAGMAIGGWLGGAIFDATLSYRSAFQAALAFNLLNLMLLGA
                     LFFAHRRRVFA"
     gene            2053..>2521
                     /locus_tag="VF991_18655"
     CDS             2053..>2521
                     /locus_tag="VF991_18655"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9558519.1"
                     /translation="MAQFTSDGLALAYDAFGPTDARKAIVLVHGFSSNRYENWKRMGW
                     YDAIAGKGLRGLALDCRGHGESAKPHDPEKYDRAAMARDVFNLMDHAGIERAHLLGFS
                     MGAHIALTAAMADGGRIDHLVVAGVGARIFESAREPDAMAKAMEAVTPDEIADP"
BASE COUNT          468 a          836 c          882 g          335 t
ORIGIN      
        1 gcggcgcgtc gaaggtcatc gggtcctgca ggtcgaggcc ggccatggtg tcgaggaaca
       61 gcgccaggtc ggaaacggtg cgcgccatcg gcccctgcac cgaaagcggc aggtagagat
      121 tgttggaggt gccgcgcgtc acccgtcccg gcgagggccg cagccccacc accgagcaat
      181 aggtgccggg ccggcgcagc gagccgccat ggtcggagcc gtgcgccagc cagacttcgc
      241 cggtcgccag cgacaccgcg ccgccgccgg tcgagccgcc gcaggtcagc gacgtgttcc
      301 acggattgcg cgtccggccg aacacctcgt tgaaggtgct gccgccggcg ccgaactccg
      361 gcgtgttgga cttggcgacc acgatgccgc ctttgcgttc gatgcgctcg accagcggat
      421 gcgacttggc gggcacatgg tcggcgaaca gcggagagcc gtaggtcgtg cgcacgcccg
      481 cgacgtcggc caggtccttg atcgagacgg gcagcccggc gagccatcct gcttcgccgg
      541 cggcttcgca ggatttgccg gccatgatgc gcttggcgtg atcgcgggcg cggtcgaggc
      601 agagggtcgg cagcgcgttc accgcgggct cgacgtcggc gatgcgcttg gccgaagcct
      661 cgacgaggtc gagcggcgag atctcgcgtt tcttgagcag ggcgaccgct tcgacggcgg
      721 tcaatttcca gagatcgttg gtcatggtcc cctaggcaaa gacacggcgg cggtgggcga
      781 aaaagagcgc gccgagcagc ataaggttca agaggttgaa ggccaacgcc gcctggaagg
      841 ccgagcggta ggacagggtg gcgtcgaaga tggcgccgcc cagccagccg ccgatcgcca
      901 tgccggccat ggcgaacagc atgaccacgc cgagccgcca gccggcgatg gccggcccat
      961 agagctggcg caggatcagc gcataaccct ggacgatggc gatgtaggga atgccgtgga
     1021 tcaccgagag ggtgtagatg cccgaaaggc tttgcacgaa cacgaagccc agcagcgagg
     1081 cgatctggat gacggcgcag agcaggctga cccggatcgg cccgatatag tcggccagcc
     1141 gtcccatggc gaaggtcgag gccacggccg tcagcagcac cagcgacacc gcctccgacc
     1201 cgcgcgcggc ggcaaacccc aggtcgccgc agaacgccac catgtgcacg aagggaatcg
     1261 ccatcgccac gcagcagcag aagcccgccg ccgacaacag ccccatgatc gcgagcgacg
     1321 gcaggcgcag gaccgagaga tcttcggcgg cgcgcttgcc gacgcggcgc acgaccggcg
     1381 agggccgcac gtagaaggcg cagaggaaca acagcgtgcc cgcgaccacg ccgtagatca
     1441 ccagggtctc gcgccagccg acgtcgggca acagccagcg atagacctgc ggccacacga
     1501 agcccgagac cgccgggccc accgagatga tggaaacagc ggtgctgcgg cggcggtcga
     1561 accagccctg gatgttgttc atggccggcg tgaaggtggc ggcattgccg agaaagccga
     1621 gcgggatcat gtagccgacg tagagcgcca gctcgccgcc gctgctggcc agccagccgc
     1681 cggcgaagat cgacgcgccc gcgatcagga gcggcacgcg gggactggtg cgatcggcca
     1741 gccaacccat catcacgccg cccacgccca tggcgaagaa gcccagcatg taggccatcg
     1801 acggcacggc gcggcggtcg ccgaattcgg cggcgatttc ccgcaagccg acgaccggca
     1861 gatagatcgc gccgccgccc aggccgatgc agaacatcga cacgaaagcc agccgccagg
     1921 cgtaggggct gtcgaccctg tgggacaggc ccgttgcggc catgcgtttg gtttcctccg
     1981 ttgccgtcct tgtccggcat ccgtgcgtcg caatcaactt gtgacctctc atggctcggg
     2041 ctagggaaag ttatggctca gttcacgtcc gacgggctgg cgctcgccta cgacgcattc
     2101 ggtccaaccg acgcccgcaa agcgatcgtg ctggtgcacg gcttctcgtc caatcgctac
     2161 gaaaactgga agcgcatggg ctggtacgac gccatcgcgg gcaagggcct gcgcgggctc
     2221 gccttggact gccgcggcca cggcgaaagc gccaagccgc acgatcccga gaagtatgac
     2281 cgcgcggcaa tggcccgcga tgtgttcaac ctgatggacc atgccggcat cgagcgcgcg
     2341 catcttttgg gtttctcgat gggcgcgcat atcgcgctca ccgccgcgat ggccgatggc
     2401 ggacggatcg atcatctggt cgtggccggc gtcggcgcca ggatcttcga atcggcgcgg
     2461 gagcccgacg ccatggccaa ggcgatggaa gcagtgacgc ccgacgagat cgccgatccc
     2521 a
//
LOCUS       DASWGA010000800         1974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1233904, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000800 DASWGA010000000
VERSION     DASWGA010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1233904"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VF991_18660"
     CDS             <1..400
                     /locus_tag="VF991_18660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558520.1"
                     /translation="ETGPGSGIGALELRRAAIETAGCRERFDQREWVGTGGGGGEASW
                     RFEVTSRDMMLSLGGGQPVQRVAHGGPQKLGGAVSYAAADDAEFTVMIDERRCIDPQS
                     GSMFAYAVEVRSEGRTFAGCAVHNPAMPAP"
     gene            420..1166
                     /locus_tag="VF991_18665"
     CDS             420..1166
                     /locus_tag="VF991_18665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HEX9558521.1"
                     /translation="MDDIERLRDMIGSAKRIVAFTGAGISTESGIPDFRSPGGIWTRY
                     KPIYFDDFMASDEMRRESWRRKFATDETMLKAEPNAGHRALAKLVEQGRMSAIITQNV
                     DGLHQRSGVPDSKVIELHGNATYASCLDCGHRHELEPIKKAFLGAGKLPLCLKCDGIV
                     KTATISFGQAMPEIPMARAQDETLGCDLFMVLGSSLVVYPAAGFPRIAKRKGAKLVIL
                     NRDPTDQDDEADMVIHGEIGPTMSRAVGVN"
     gene            1228..>1974
                     /locus_tag="VF991_18670"
     CDS             1228..>1974
                     /locus_tag="VF991_18670"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEX9558522.1"
                     /translation="MIINRRAALLGGLGAALGGLPTAAQQDITFFRIGTGGTAGTYFP
                     IGGLIANAISNPPGSRTCADGGSCGVPGLVATAVASNGSVNNVTAIAADSMQSGFVQS
                     DVAYWAYNGTGIYDGRPKVDVLRAIANLYPESFHLAARKGSGIKTIKDLQGKRVSLDE
                     PGSGTLVDARLILAAYGMTEKDIKAEYLKPQQSADKLRDGALDALFSVAGWPEGAIAE
                     LAATTGIELVPIDGPQADNLIKQFSFFAADE"
BASE COUNT          335 a          666 c          674 g          299 t
ORIGIN      
        1 cgagaccggg ccggggtcgg gcatcggcgc gctcgagctg cgccgggcgg cgatcgagac
       61 cgccggctgt cgcgaacggt tcgaccagcg cgaatgggtc ggcaccggcg gtggcggcgg
      121 cgaggcgtcg tggcgcttcg aggtcacctc gcgcgacatg atgctgagcc ttggcggcgg
      181 ccagccggtg cagcgcgtcg cccatggcgg gccgcagaag ctcggtggcg cggtgagcta
      241 tgcggcggcc gacgatgcgg agttcaccgt catgatcgac gagcggcgct gcatcgatcc
      301 ccagtccggc tcgatgttcg cctatgccgt cgaggtgaga agcgagggcc ggacattcgc
      361 cggctgcgcc gtgcacaatc cggccatgcc ggcaccgtga tcgcaggtag gagaccgaca
      421 tggacgatat cgagcggctg cgggacatga tcggctcggc caagcgcatc gtcgccttca
      481 ccggggccgg catctcgacg gagtcgggga ttcccgactt ccgctcgccc ggcggcatct
      541 ggacccgcta caagccgatc tacttcgacg atttcatggc gtcggacgag atgcggcggg
      601 aatcgtggcg gcgcaagttc gcgaccgacg agaccatgct caaggccgag cccaatgccg
      661 gccaccgcgc gctcgccaag ctggtcgagc aggggcgcat gagcgccatc atcacccaga
      721 atgtcgacgg cctgcaccag cgctccggcg tgcccgattc caaggtgatc gagctgcatg
      781 gcaacgccac ctatgcgagc tgtctcgact gcggccatcg ccacgagctg gagccgatca
      841 agaaggcgtt cctcggcgcc ggcaagctgc cgctttgcct caaatgcgac ggcatcgtga
      901 agaccgccac catctcgttc ggccaggcga tgccggaaat cccgatggcg cgcgcccagg
      961 acgagaccct gggctgcgac ctcttcatgg tgctgggcag ttccctggtg gtctatccgg
     1021 cagcgggttt cccgcgcatc gccaagcgca agggggcgaa gctggtcatt ctcaatcgcg
     1081 acccgaccga ccaggacgac gaggcggaca tggtgatcca tggcgagatt ggcccgacca
     1141 tgagcagggc tgttggcgtc aactgacgct cttcgttgcg gctggcgaag ggacgcggtt
     1201 taatcgatcc ggtcagggag gccgacgatg atcatcaatc gcagggccgc gctgctgggc
     1261 gggctgggcg cggcgctggg cggcctgccg acggcggcgc agcaggacat cacgttcttc
     1321 cgtatcggca ccggcggcac cgccggcacc tattttccga tcggcggcct gatcgccaac
     1381 gcgatctcca accctcccgg ctcgcgcacc tgcgccgacg gcggctcgtg cggcgtgccc
     1441 ggcctggtcg ccaccgcggt cgcctccaac ggctcggtca acaacgtcac cgccatcgcc
     1501 gcggactcca tgcaatcggg cttcgtccag tcggacgtcg cctattgggc ttacaacggc
     1561 accggcatct atgacggccg gcccaaggtc gacgtgttgc gcgccatcgc caacctctat
     1621 cccgagagct tccacctggc ggcgcgcaag ggctcgggca tcaagacgat caaggacctc
     1681 cagggcaagc gcgtctcgct cgacgagccg ggctcgggaa cgctggtcga tgcccgcttg
     1741 atcctggcgg cctacggcat gaccgagaag gacatcaagg ccgaatacct gaagccgcag
     1801 cagtcggccg acaagctcag agacggcgcg ctcgacgcgc tgttcagcgt cgccggctgg
     1861 ccagagggcg cgatcgcgga actggcagca acgaccggca tcgagctcgt gccgatcgac
     1921 ggcccgcaag cggacaacct gatcaagcag ttcagcttct tcgccgccga cgag
//
LOCUS       DASWGA010000801         3478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_730832, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000801 DASWGA010000000
VERSION     DASWGA010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3478
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730832"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            471..2231
                     /locus_tag="VF991_18675"
     CDS             471..2231
                     /locus_tag="VF991_18675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9558523.1"
                     /translation="MTTVRNGRSAAEPLGLAGEGFRPNLYDLAIFVLIAGAFVALAHG
                     AREMTAPAARLVVEPITLDPANLPEYALRTTLRMFAAILASLLFTFVVATLAAKSRKA
                     ELVIIPALDILQSVPVLGFLTFTVVFFVGLFPGSEFGAECAAIFAIFTSQAWNMAFSF
                     YQSLRTVPRDLEEVSRHFGLSPWLRFWRLEAPFAAPGLIWNTMMSMSGGWFFVVASEA
                     ITVGDTTIKLPGIGSWLAVAIEAKDIHAVLLAVATMAVVILIYDQLVFRPIVAWADKF
                     RFEQTAAQQRPRSWLYDLWRRGRLIRQLARSTAWLGGRVSRLPLRLALPPRARTLPAA
                     GPAAGRLADRLWQLVVLVLVALALWRIVVFVRASLGWHDLLTALGLGLLTFTRVAILI
                     ALASVVWVPIGVWIGLRPVVATRVQPLAQFLAAFPANVLFPIAVVAIVSFHLDPDIWL
                     SPLMVLGTQWYILFNVIAGASAFPTDLREASTLFRLRTWQWWRQVILPGILPYYVTGA
                     LTATGGSWNASIVAEVASWGDTRLEAAGLGSCIADASAAGDYPRVVLGIAVMSVMVVA
                     CNRLVWRPLYRLAERRFRLE"
     gene            2243..>3478
                     /locus_tag="VF991_18680"
     CDS             2243..>3478
                     /locus_tag="VF991_18680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/sulfonate/bicarbonate ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9558524.1"
                     /translation="MESTTVPVDTSSLVVVDGVRQLYPKGSGDNVLVLDDVRLTLRSN
                     EIVSLLGRSGCGKSSLLRIVAGLMPASAGQVSIGGRPVAGPAPEVAMVFQTFALFPWL
                     TVLENVEIGLEAQRIEPAERHKRALAAIDLIGLDGYESAYPKELSGGMRQRVGLARAL
                     VVHPKVLLMDEPFSALDVLTAETLRTDLLDLWCEGRMPISSILLVTHNIEEAVLMSDR
                     ILVFSSNPGRVVAEIPVTLPMPRNRLDPAFRQMVDDIYALMTARPAGKQAQGVFPGTG
                     ISMLLPRVSPNLMAGLMETVAAEPYKGHADLPALAGPLQMEIDDLFPVAETLQLMRFA
                     ELAEGDLRLTEAGRRFVDLDPDGRKQLFAQHLLAYVPLAGHIRRVLDERGAHRAPASR
                     FHDELEDHMSEQFADQTLRS"
BASE COUNT          486 a         1225 c         1115 g          652 t
ORIGIN      
        1 tcggcagcga gcgccgacag aggcgccagc aatgccgtga ccaaggccgc cgcccgccca
       61 agccgcgccc cgggatacca gcccgacttc ccgctcattc cccgaatctc caccgtcttc
      121 actgtcgtct tcgcatcttg aattaccgca tgcgtggcgg ccagtccggc aaaacgcaac
      181 ttcgctctct tggttgcttt tttgtgtgat cgccctggcg ctcacggcat gtcgaccgcg
      241 cttgacggat tttccatcgg ggcgtattgg cccgcgcaac gatcatcaca agggactcga
      301 tgaacccgcg atctagcaac gttccggccg attgccacag tcgccgtgcg actgcgacca
      361 aggtcggggc tatcacccgg gaaaacgaga tcccgagagt ccgcctgccc taggcaccct
      421 cgctcgcgct tccggatcgg tgcaaccgaa cggacatgaa ggaagcgcgg atgacgacag
      481 tccgcaacgg ccgctcggcc gccgagccac tcgggctcgc gggcgagggg ttccgcccca
      541 acctctacga tctcgcgatc tttgttctga tcgcgggggc gttcgtcgcg ctggcccacg
      601 gcgcgcgcga aatgacggcg cccgccgcgc ggcttgtcgt ggagccgatc acgctcgatc
      661 cggccaacct gccggaatat gcgctgcgta cgaccttgcg catgttcgcc gccatcctgg
      721 cctcgctgct gttcaccttc gtcgtggcca cgctcgccgc caagagccgc aaggccgagc
      781 tcgtcatcat cccagcgctc gatatcctgc agtcggtgcc ggtgctgggc ttcctcacct
      841 tcacggtggt cttcttcgtc gggttgtttc caggaagcga gttcggtgcc gaatgtgcgg
      901 cgatcttcgc catcttcacc agccaggcgt ggaacatggc cttcagcttc taccagtcgc
      961 tgcgcaccgt gccgcgcgac ctggaggagg tcagccggca tttcggcctc tcgccgtggc
     1021 tgcgcttctg gcggctcgag gcgccgttcg ccgcgcccgg gctcatctgg aacactatga
     1081 tgtcgatgtc gggcggctgg ttcttcgtgg tcgcctcgga agccataacg gtcggcgaca
     1141 ccacgataaa actgccgggc atcggctcgt ggcttgccgt ggcgatcgaa gccaaggaca
     1201 tacatgccgt gctgctcgcg gtcgcgacca tggccgtcgt catcctcatc tacgaccagc
     1261 tcgtgttccg gcccatcgtg gcctgggccg acaagttccg cttcgagcag accgccgccc
     1321 agcaacggcc gcgctcctgg ctgtacgatc tgtggaggcg cgggcggctg atccgccagc
     1381 tcgcgcgctc cactgcttgg ctgggcggcc gcgtctcgag gctgccgctt cgccttgccc
     1441 tgccgccgcg ggcccggacg ttgccggccg ccgggccggc cgccggccgg ctggccgatc
     1501 gcctgtggca gctggtcgtt ctcgtcctcg tggccttggc gttgtggcgc atcgtcgtct
     1561 tcgtgcgcgc ctcgctgggc tggcacgatc tcttgacggc actgggcttg ggcttgctga
     1621 cgttcacccg cgtcgccatc ctgatcgcgc tcgcgagcgt tgtctgggtg ccgatcggcg
     1681 tgtggatcgg cctgcgcccc gtggtcgcca cgcgcgtgca gccgctcgcc cagttcctgg
     1741 cggcgttccc ggccaacgtg ctgtttccca tcgccgtggt cgccatcgtg tcgttccatc
     1801 tcgatcccga catctggctg agcccgctga tggtgctggg cacgcagtgg tacatcctgt
     1861 tcaacgtgat tgccggcgcc agcgcctttc ccaccgacct gcgcgaggcg tcgacgttgt
     1921 tccgtctgcg gacgtggcaa tggtggcgcc aggtcatcct gccggggatc ctgccctatt
     1981 acgtcaccgg cgcgctgacg gccacgggcg gttcgtggaa cgccagcatc gtcgccgagg
     2041 tggcgagctg gggcgacacc aggctggagg ccgccggcct cggatcctgc atcgccgacg
     2101 caagcgctgc gggcgactat ccgcgcgtcg tgctgggcat cgccgtcatg tcggtcatgg
     2161 tcgtggcctg taatcggctg gtgtggcgac cgctctaccg tctcgccgaa cggcgctttc
     2221 gtctcgagta aggagatccg tcatggaatc gacgacagtc ccggtcgaca cgtcctcgct
     2281 ggtcgtggtc gacggcgtgc gccagctcta ccccaagggc agcggcgaca acgtgctggt
     2341 gctcgacgat gtcaggctga cgctgcgcag caacgagatt gtctcgctgc tcggccgctc
     2401 aggttgcggc aagtcttcgt tgctgcgcat cgtcgccggc ctgatgccgg ccagcgccgg
     2461 gcaggtgtcg attggcggcc gcccggtggc gggaccggcg cccgaggtcg cgatggtgtt
     2521 ccagaccttc gccctcttcc cctggctgac cgtcctggag aacgtcgaga tcggactgga
     2581 ggcgcaacgc atcgagccgg ccgagcgcca caagcgcgca ctcgccgcca tcgacctgat
     2641 cggcctcgac ggctacgaga gcgcctatcc caaggaattg tcgggcggca tgcgccagag
     2701 ggtcgggctg gcccgcgcgc tggtggtcca tcccaaggtg ctgctgatgg acgagccgtt
     2761 ctccgcgctc gacgtgctga ccgccgagac cctgcgcacc gacctgctcg acttgtggtg
     2821 cgaggggcgc atgccgattt cctccatcct gctggtgacg cacaacatcg aggaggcggt
     2881 gctgatgtcc gaccgcatcc tcgtcttctc ctccaacccc ggtcgcgttg ttgcggagat
     2941 tccggtcacc ttgccgatgc cgcgcaaccg gctggacccg gcgttccgcc aaatggtcga
     3001 cgacatctac gcgctgatga cggccagacc ggccggcaag caggcccagg gcgtctttcc
     3061 gggcaccggc atctccatgc ttctgccgcg cgtgtcgccc aacctgatgg ccggcctgat
     3121 ggagacggtg gccgccgagc cctacaaggg ccacgccgat ctgcccgctt tggcagggcc
     3181 attgcaaatg gaaatcgacg acctgtttcc ggtggccgag accctgcagc tcatgcgctt
     3241 cgccgagctg gcagaaggcg atctcaggct caccgaagcc ggccgccgct tcgtcgatct
     3301 cgatcccgac ggtcgcaagc agctgttcgc ccagcatctt ctggcctacg tgccgctcgc
     3361 cggccacatc aggcgcgtgc tcgacgagcg cggcgcccat cgcgcgccgg ccagccgctt
     3421 ccacgacgag ctcgaagacc acatgtccga acagttcgcc gaccagaccc tgcgctcg
//
LOCUS       DASWGA010000802        11436 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1105219, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000802 DASWGA010000000
VERSION     DASWGA010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 11436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11436
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1105219"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VF991_18685"
     CDS             <1..269
                     /locus_tag="VF991_18685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558525.1"
                     /translation="DRTQVEYMRVDGRRFEVRVTPADDVGVYRLLVVRATLVIDPDPE
                     AERSRGWNVARQVMDRTCKGRPYQVLEDNLVDNVNLYTRFRCAA"
     gene            354..800
                     /locus_tag="VF991_18690"
     CDS             354..800
                     /locus_tag="VF991_18690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003527841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPC domain-containing DNA-binding protein"
                     /protein_id="HEX9558526.1"
                     /translation="MQSKLVWENAGERTFVLVLDAGEEAFAAIVGFAARSDLSAASLT
                     ALGAFERATVGWFDLARKTYKPIEIDSQCEGLSLLGDIATGDDGKPSLHMHAVLGLSD
                     GTTRGGHFLKGIARPTLEVTIVETPARLRRRKRPELGIALIDLSKS"
     gene            complement(880..1947)
                     /locus_tag="VF991_18695"
     CDS             complement(880..1947)
                     /locus_tag="VF991_18695"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HEX9558527.1"
                     /translation="MKIDLPQPQRPTGLRNVTPPPRPPPADSNEFASFAAQLAARSEK
                     HRVDAASAAAPTPSIDRAEAASPSLLSLLASRRAGPIGAGVLLLATASVAALAVWGLP
                     FQASTLWPSNHAEQAKGHGPSTGKLEAKILPPVSTPPAATPLASATPAPPRTASPPPP
                     LSPAAAPPLPVAAPPAPKELVRSAPEFVPSAPQIASTTQPGSAPLTADEIRELQGKLK
                     AAGFNPGPIDGVVGRQTRGAVREYGQARALPNADATRELFVRLKAEPAATVSSPSVTP
                     PPVTPAPVAQQADKPTTPDGASPLTPDEIRILQDRLKAAGFNPGAVDGVMGRQTRSAV
                     RDYAEAQGIPTAEATRDLLLR"
     gene            complement(2139..3266)
                     /locus_tag="VF991_18700"
     CDS             complement(2139..3266)
                     /locus_tag="VF991_18700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX9558528.1"
                     /translation="MGALNIAIIGAGMGGLAAAAALRKQGIAVTVYEQAKQFTRLGAG
                     IQIGCNAMHVLRGLGLEPGLRAETFYPRSWNNRHWQTGEVLFDMLFGPSAEQKYGAPY
                     LLAHRGDLHAALAGAVPADCIRLNHRLVGLEQTPSGVRLSFANGETAEADALIGADGV
                     NSIVRKSLSNDGEPRFTGRIAYRTTYPARRLGGFDIGDCTKWWGEDRHIVMYPVKADR
                     SEVYFVTSQPEPESGRESWSEMGDVKVLRAAFESFHPDVQRVLAACPEVHKRVLVDRE
                     PLERWVEGKVALLGDACHPMTPYMAQGAAMAIEDAAILSRCLADAGRADIAEALERYE
                     ATRQERTARVQLTSRQNSWGKGVTDTDWVYGYNAWTAPLAN"
     gene            complement(3364..4434)
                     /locus_tag="VF991_18705"
     CDS             complement(3364..4434)
                     /locus_tag="VF991_18705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558529.1"
                     /translation="MPYKIMIMGASYGSLLASKILFGSHQLHLICLPAEADLINTEGF
                     RVRMPIRGRKDPIEIDSRKLPGKVTAGGTAGVYPADYDLVGLAMQEPQYRSPGVRELL
                     DAVAKSRVPCMSIMNMPPLPYIKRIPGLNYELLKPAYTDPTVWDSFDAERLTLCSPDP
                     QAIRPPEEKVNVLQVTLPTNFKVAKLKDDKATGMLRQLEKDIDAVRFDAGAEKIELPV
                     KLRVYDSLFVPLAKWAMLLAGNYRCVTKDGMRTAQEAVHSDIATSRSVYNFVNDLCVK
                     LGANPDDLVPFEKYAAAAQSLTRPASAARALNNGLPNIERADKLVQLIAKQKGLSHPV
                     IDAGVALVDARLDANRKKAAAA"
     gene            complement(4598..6910)
                     /locus_tag="VF991_18710"
     CDS             complement(4598..6910)
                     /locus_tag="VF991_18710"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033922 - peptidoglycan
                     beta-N-acetylmuramidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exo-beta-N-acetylmuramidase NamZ
                     domain-containing protein"
                     /protein_id="HEX9558530.1"
                     /translation="MTSSPRRPSRAAALCLLIVGLLCQAVISCTSATTPAAAAPPTNP
                     SSSGAAQAISNIVNEEIAAGHLPGAVVVLGINDKIVLRQAYGQRALMPAVKPTTLDTI
                     YDAASLTKVMVTAVAIQQLVERGQIDLDRPAAAYWPAFANNGKGNITVRQLSTHYAGL
                     PAGIPTRGWSDTAGALDTIVGLKPVAPAGSRFVYSDVDFIVLGEIVQRVSGEPLESYA
                     AKHIFQPLGMRDTFFHPPTALRDRIAPADVEGAELRWGEVQDPIAYRMGGVAGNAGVF
                     TTADDLTKFAQMMLAGGQSVLKPASVAAMTQPQSPPGGAALRGLGWDIDSPYAVWFAP
                     SFSTRSYGHTGYTGVAIWIDPETKTFLIVLTNRLHPDGRGDILPMLRRIAEVAGAAAR
                     GGQAHVLSGIDVLEAYGFRQLAGRRVGLVTNRSARDSAGRRTADVLHQAAGPKLVALF
                     SPEHGLDASAEGKIASGRDAATGLPVLSLYGSTMRPTSDMLAGLDALIFDMQDVGARY
                     YTYPTTMAYAMEAAARDKVDFFVLDRPDPITASIVQGAVLDPDLVSFITYMPLPVRHG
                     MTLAELARLFNAEKQLGARLHVITMRRYQRAMWFDQTGFAWVPPSPNLRKLEQAILYP
                     GVGMIEAANVSVGRGTDTPFEVVGAPWIDGKALADALNTRGIPGVRIEPTTFTPREWV
                     YPGQACGGVRITLTDRNRLDSPLLGLELMATLWRLYGSQFQIDRTVSMLGSRASLEAV
                     KAGGDPRDIARSWTPGLDDFLQLRRKHLLY"
     gene            complement(6885..8162)
                     /locus_tag="VF991_18715"
     CDS             complement(6885..8162)
                     /locus_tag="VF991_18715"
                     /inference="COORDINATES: protein motif:HMM:NF024598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative glycoside hydrolase"
                     /protein_id="HEX9558531.1"
                     /translation="MKLLVAAVAACSLLLPMAYAQDRKEAAREVEREGTVVDGTTGAP
                     VAGAIVTVGDKALLTDAQGLYRVDGTLAIKVRAAGYARETVALDESASPHTVKLTPLL
                     PKALYLTVYGIGAPFLLDPALEVIQKSKLNALVIDVKGDRGLIPYPSALPLAAKAGAL
                     KLRTIPDLKELVSTLKAKNLYLIARIVVFKDDLLVNVHPEWAVRNTGGGIWKDREGLA
                     WIDPYRKEAWDYTIGVAEEVAAAGFDEVQFDYVRFPDASQGVVFSQPSTENGRVAAIT
                     DFLREARRRLVPYNVFVAMDSFGYVCWNQNDTGIGQRVEDLATAVDIISPMLYPSGFQ
                     FGIPGYRNPVQNPYEIVYRSLEECKKRTADKPARYRPWLQAFTDYAFGGVVFGPDQIG
                     KQVKASRDAGTVGWMMWNPRNVYSTNDIKPETP"
     gene            complement(8172..8954)
                     /locus_tag="VF991_18720"
     CDS             complement(8172..8954)
                     /locus_tag="VF991_18720"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9558532.1"
                     /translation="MGRWLAALVTALVVTSSFLCPASEAAEPPLNVPILLYHRLGPVL
                     TDDMTVTTPVVESQLKLIQERGYQVIPLRKLLEAYNEPEAPPPERSVVLVADDGHRSV
                     YTDLFPLIKRFQIPVTLFIYPSAISNPSAPYAMTWEQLAEVKASGLVDIQSHTFWHPN
                     FKVDKKRLAPAAYEKFVQDQLVKSKTVLDQRLGLKVDLLAWPFGIYDDDLIKAASEAG
                     YVAAFSIERRPVTRTEKVMSLPRFIVTDADRGDRFERLLPAK"
     gene            complement(9007..>11436)
                     /locus_tag="VF991_18725"
     CDS             complement(9007..>11436)
                     /locus_tag="VF991_18725"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HEX9558533.1"
                     /translation="MAALASPEMKDTALAMARGQWAWGADVLAALGLDQVAGKPRPGA
                     GLDVWRNLPIWEEPPPQPPPASNPVEPREARLRLAQLIAAGPNLAEARPTQSDYASAA
                     SQAFAPREQEDKPNVVLVEAGTGVGKTLGYVAPASLWAEKNGAPVWIATYTRNLQRQI
                     DNELDRLHRDSAEKRRRVVIRKGRENYLCLLNFQEAVMRTGLVPENAVGLGLLARWAL
                     NSRDGDMVGGDLPAWLLDLLGRSRITRLADRRGECIYSACEHYRKCFVERTIRRARQA
                     DIVIANHALVMIQAAMGGLDDATRPLRYVFDEGHHLFDAADSAFGAHLSGVEASDLRR
                     WLLGAEGRRGSRARGLERRLNDLLGDNLDAQQALRRLLSLAQQLPSPNWQTRLVDGTV
                     LGPAEEFLALVRQQVRARASGEDQGFGQECDVRPLNHGLLEAADRLGEALELMLAPVR
                     QLRAALRAKLEGEADKLDSGQRARIEGVARSLANRCELTLEAWRAMLRGLHNEPDPAF
                     VDWFAIEKSQNREIDVGMYRHYLDPTEPFINAVVRPAHGAVITSATLRDSLGVPAAAN
                     DEDAEALADWTVAEARTGTRHLSLPAMRAAMASPFDYVDATRVLIVRDVKRDDFGQVA
                     AAYRELFVASGGGALGLFTAIGRLRAVHQRIAPALEEAGLPLYAQHVGGMDAATLVDI
                     FRAEEHSCLLGTDAVRDGVDVPGRSLRLIVFDRVPWPRPDILHRARKEAWKKAGAGAN
                     AYDDMLARLRLKQAYGRLIRRADDRGVFVMLDSRLPTRLLGAFPPGVSIERVGIADAV
                     IAVREFCNRER"
BASE COUNT         1803 a         3736 c         4019 g         1878 t
ORIGIN      
        1 tcgatcgcac tcaggtcgag tatatgcggg tcgacggaag acgcttcgaa gtgcgcgtca
       61 cgccggccga tgacgtgggc gtctatcgcc tgctcgtcgt gcgcgccacc ctcgtcatcg
      121 accccgatcc cgaggccgaa cgcagccgcg gctggaacgt ggcgcggcag gtcatggaca
      181 ggacctgcaa gggtcggccc taccaagtgc tcgaggataa cctcgtcgac aacgtcaatc
      241 tctacacgcg cttccgctgc gccgcctgac gcgggcgcgg cgcaacgatc ccgcgggtca
      301 cgagttgact cctccgcggc ggccccctgc cgcacgcaac tcaggagccc gccatgcaat
      361 ccaagctcgt ctgggaaaat gccggcgaac gcaccttcgt cctcgtcctc gacgccggtg
      421 aggaggcctt cgccgccatc gtgggcttcg ccgcgcgctc cgacctttcc gccgcgtcgt
      481 tgacggcgct gggcgccttc gagcgcgcga cggtcggctg gttcgatctc gccaggaaga
      541 cctacaagcc gatcgagatc gacagccagt gcgaaggatt gagccttttg ggcgacatcg
      601 ccaccggcga cgacggcaag cccagcctgc acatgcacgc cgtgctgggc ctgagcgacg
      661 gcaccacccg cggcggccat ttcctcaagg gcatcgcgcg gccgactctg gaagtgacta
      721 ttgttgaaac cccggctcgg ctgcgccgcc gcaagcggcc ggagctcggc atcgctctca
      781 tcgatctgtc gaaatcgtga cgtcttctcc tccctcgtca tacgagggga ggtggccgcg
      841 tgagcgtctc agacggcgca gaggcgcgga cgggcgcact caacgcaaga gcaaatccct
      901 tgtcgcttct gcggtcggaa tgccctgcgc ctcagcgtag tcacgaacag cgctgcgcgt
      961 ctggcggccc atgactccgt cgacggcccc ggggttgaag ccggccgcct tgagcctgtc
     1021 ctgcaggatg cggatttcgt cgggcgtcag cggtgacgca ccgtccggcg tcgtcggttt
     1081 gtcggcttgt tgggcgacag gcgccggggt gacgggtggc ggggtgaccg acggcgacga
     1141 gaccgttgcc gcgggttctg ccttcagacg cacgaacagc tctcttgtcg cgtcggcgtt
     1201 cggcagggcc cgcgcctggc cgtattcgcg aacggcaccc cgtgtctggc ggccgacgac
     1261 tccgtcaatc ggtccggggt tgaagccggc ggccttcagc ttgccctgca gctcgcgaat
     1321 ctcgtcggcc gtcaggggcg ccgaaccggg ctgtgtggtc gatgctattt gcggtgccga
     1381 tgggacgaat tccggcgccg atctgacaag ctctttcggc gcaggcggcg cggcgaccgg
     1441 tagcggggga gctgccgcag gcgagagcgg cggcggcggc gaggccgttc gaggaggggc
     1501 cggcgtcgca gaggcgagcg gcgtggcggc aggcggtgtg gaaaccggcg gcaggatctt
     1561 tgcttccagc ttgcccgtcg aggggccgtg gcctttcgct tgttcggcat ggttcgatgg
     1621 ccagagtgtc gaggcctgaa aaggcaggcc ccagacggcc agggcagcca cgctcgccgt
     1681 cgccagcagc aagacgccgg ccccgatggg accggcgcga cgcgaggcga gcagagacaa
     1741 gagcgaaggg ctggccgctt ccgcgcgatc gatgctgggc gttggcgccg ccgccgaggc
     1801 ggcgtcgacg cgatgtttct cgcttcgcgc cgcgagctgc gcggcgaacg acgcaaactc
     1861 attactatcg gccggcggcg gccttggcgg gggtgtcaca ttgcgcagtc cagtcggacg
     1921 ttgcggttgc ggcagatcga tcttcatcca acgcaccgat ggttgtgcac gatcgcaaca
     1981 aggttaccgc cgccgccaca tcaaaggtgt gatcaagtgg gggcatcccc ctggggctgc
     2041 gtgacatcga aacgtcatgt ccgggccggc ccgggcgtcc tcgttccctg acttgcagga
     2101 gaatcgagat atgccagtcc gcccacggtt gccgacattc agttggccag tggcgccgtc
     2161 caggcgttgt agccatagac ccagtcggtg tccgtgacgc ccttgcccca actgttctgg
     2221 cgcgaggtga gctggacccg cgccgtccgt tcctggcgcg tcgcctcgta tcgttcgagc
     2281 gcctcggcaa tgtcggcgcg gcccgcgtcg gccaggcaac gagagaggat cgccgcatcc
     2341 tcgatcgcca tcgccgcgcc ctgcgccatg tagggcgtca tcggatggca ggcgtcgccc
     2401 agcagcgcca ccttgccctc gacccagcgt tcgagcggct cgcggtcgac cagcacgcgc
     2461 ttgtggacct cggggcaggc ggcgagcacg cgctgcacgt cgggatggaa gctctcgaag
     2521 gccgcgcgca gcacttttac gtcgcccatt tccgaccacg attcgcgacc ggactcgggc
     2581 tcgggctggc tggtcacgaa gtagacttcg ctgcggtcgg ccttcaccgg gtacatgacg
     2641 atgtggcggt cctcgcccca ccatttggtg cagtcgccga tatcgaagcc acccagccgg
     2701 cgcgccggat aggtcgtgcg ataggcgatg cgcccggtga agcggggctc gccgtcgttg
     2761 gacagggatt tgcgcacgat cgagttgacg ccgtcggcgc cgatcagcgc gtccgcctct
     2821 gccgtctcgc cgttggcgaa gctgagacgc acgccgcttg gcgtctgctc caggccgacc
     2881 agccgatgat tgagccggat acagtcggcc ggcacggcgc ccgccagcgc cgcgtgcagg
     2941 tcgccgcgat gggcgagaag atacggcgcg ccgtattttt gttcggccga ggggccgaac
     3001 agcatgtcga acagaacctc gccggtctgc caatgccggt tgttccacga gcgcggatag
     3061 aaggtctcgg cgcgcagccc cggctccagc ccgagcccgc gcagcacatg catggcgttg
     3121 cagccgatct ggatgcccgc gcccagccgc gtgaactgct tggcctgctc atagaccgtg
     3181 acggcgatgc cctgcttgcg cagcgccgct gcggccgcca gcccacccat gccggcgccg
     3241 atgatggcga tgttgagagc gcccatgcct tcatttgtca tcctgagcgt aagcgaagga
     3301 tctcatcgcc ggttgccgcg ggcatgagat ccttcgctgc gctcaggatg acggctgtcg
     3361 ccgtcaagcc gccgccgcct tcttgcggtt ggcgtcgagc cttgcatcaa ccagggcgac
     3421 gccggcgtcg atcaccggat ggctgaggcc cttctgcttg gcgatgagct gcaccagctt
     3481 gtcggcgcgc tcgatgttgg gcaggccgtt gttgagcgcg cgcgccgccg aggccggacg
     3541 cgtgaggctc tgcgcggcgg cggcatattt ctcgaacggc accaggtcgt ccggattggc
     3601 gcccagcttg acgcagagat cgttgacgaa attatagacc gagcgcgagg tcgcgatgtc
     3661 gctatggacg gcttcctggg ccgtccgcat gccgtccttg gtcacgcagc gatagttgcc
     3721 ggcgagcagc atcgcccatt tggcgagcgg cacgaagagc gagtcgtaga cccggagctt
     3781 gaccggcagc tcgatcttct cagccccggc gtcgaagcgc acggcgtcga tgtccttctc
     3841 gagctggcgc agcatgccgg tcgccttgtc gtccttgagc ttggcgacct tgaagttggt
     3901 cggcagggtg acctgcagga cattgacctt ctcctccggc gggcggatcg cctgcgggtc
     3961 ggggctgcag agcgtcagtc gctcggcatc gaagctgtcc cacaccgtgg ggtcggtata
     4021 ggcgggcttc agcagctcgt agttgaggcc ggggatgcgt ttgatgtagg gcagcggcgg
     4081 catgttcatg atcgacatgc agggcacccg cgacttggcc acagcgtcca gaagctcgcg
     4141 cacgcccggt gagcggtatt gcggctcctg catggcgagc ccgacgaggt cgtagtcggc
     4201 gggatacacg ccggcggtcc cgcccgccgt cactttgccc ggcagcttgc gcgaatcgat
     4261 ctcgatcggg tccttgcggc cgcgaatcgg catgcgcacg cgaaagccct ctgtattgat
     4321 caggtcggcc tcggcgggca ggcagatcag gtgcagctga tggctgccga aaagaatctt
     4381 ggaggcaagc agcgacccgt aggacgcgcc catgatcatg atcttgtacg gcattttcgc
     4441 tccctcgcgg cgtttgccgg cattgtcgcg tcaagttcgg ctgccgtcaa agcccgcggg
     4501 cttcatgctc ttccggaccg cgcgcttcca gcgcgctcat gattcatgag cgagccagag
     4561 gctcgcggtc cggaagacca tgacaggccg acagccctca atacagcagg tgcttccgcc
     4621 gcagctggag gaagtcgtcg aggcccggcg tccacgagcg ggcgatgtcg cgcggatcgc
     4681 cgccggcctt caccgcctcg agggaggccc gcgaaccgag catgctgacc gtgcggtcga
     4741 tctggaactg gctgccatag aggcgccaga gtgtcgccat cagctcgagg ccgagcaggg
     4801 gactatccag ccggttgcga tcggtgaggg tgatgcggac gccgccacag gcctgtcccg
     4861 gatagaccca ttcgcgcggc gtgaaggtcg tgggctcgat gcgcacaccc gggatgccgc
     4921 gcgtattcag ggcatcggcc agcgccttgc cgtcgatcca gggcgcgccc accacctcga
     4981 acggcgtgtc ggtaccgcgc ccgacgctga cattggcggc ttcgatcatg ccgacgccgg
     5041 gatagaggat cgcctgctcg agcttgcgca gattgggcga gggcggcacc caggcaaagc
     5101 cggtctggtc gaaccacatg gcgcgctggt agcggcgcat ggtgatcacg tgcagcctgg
     5161 cgccgagctg tttctcggcg ttgaacaggc gcgcaagctc ggcgagcgtc atgccgtggc
     5221 gcaccggcag cggcatgtaa gtgatgaagg agacgaggtc cgggtcgagc accgccccct
     5281 gcacgatcga ggcggtgatc gggtcgggcc ggtcgagcac gaagaagtcg accttgtcgc
     5341 gcgccgccgc ctccatggca taggccatgg tcgtgggata ggtgtagtag cgcgccccga
     5401 cgtcctgcat gtcgaagatc agggcatcga gcccggccag catgtcggat gtcggccgca
     5461 tggtgctgcc gtacaggctg agcaccggca agccggtcgc ggcatcgcgg cccgaagcga
     5521 tcttgccctc ggccgaggca tcgagcccgt gctcggggct gaacagcgcc accagtttgg
     5581 gcccggccgc ctggtgcagg acatcggcgg tgcgccgccc cgccgaatcg cgcgccgagc
     5641 ggttggttac aaggccgacg cggcgcccgg cgagctggcg aaagccgtag gcttccagga
     5701 cgtcgatgcc cgacaaaacg tgggcttgcc cgccgcgcgc cgccgcgccc gcgacctcgg
     5761 cgatccgcct gagcatgggc aggatgtcgc ccctgccgtc gggatggagc cggttggtga
     5821 gtacgatcag gaaggtcttg gtctcgggat cgatccagat cgccacgccg gtgtagccgg
     5881 tatggccata ggagcgggtc gagaaggagg gcgcgaacca tacggcgtag ggcgaatcaa
     5941 tgtcccagcc gaggccgcgc aaggccgccc cgccgggcgg gctctgcggt tgcgtcatgg
     6001 ccgccaccga tgcgggcttc agcacgctct ggccgcccgc cagcatcatc tgggcgaatt
     6061 tggtgaggtc gtcggcggtg gtgaacaccc cggcattgcc tgccacgccg cccatgcggt
     6121 aggcgatcgg atcctgcacc tcgccccagc gcagctcggc gccttcgacg tcggccggcg
     6181 cgatgcggtc cctgagcgcg gtcggcgggt ggaagaacgt gtcgcgcatg ccgagcggct
     6241 ggaagatgtg cttggcggcg tagctctcca gcggctcgcc cgagacccgc tgcacgatct
     6301 cgcccagcac gatgaaatcg acgtcgctgt agacgaagcg cgagccggcg ggcgccacgg
     6361 gtttcagccc gacgatggta tcgagcgcgc ccgcggtgtc ggaccagccg cgcgtcggaa
     6421 tgccggcggg caggccggcg tagtgggtcg aaagctgacg gacggtgatg ttgcccttgc
     6481 cgttgttggc aaaggccggc cagtaggcgg cggccggccg gtcgagatcg atctgcccgc
     6541 gttcgacgag ctgctggatg gcgacggccg tcaccatcac cttggtgagc gaggcggcat
     6601 cgtagatcgt atccagggtg gtgggcttga ccgccggcat cagcgcgcgc tggccgtagg
     6661 cctggcgcag cacgatcttg tcattgatgc ccagcacgac cacggcgccg ggcaggtggc
     6721 cggccgcgat ctcctcgttg acgatgttgc tgatcgcctg cgcggcgccg ctcgacgatg
     6781 ggttggtggg cggcgccgcg gcggccggcg tcgtcgccga cgtgcaggaa atcaccgcct
     6841 ggcagagaag gccgacgatc agcaggcaaa gcgcggcggc gcggctaggg cgtctcgggc
     6901 ttgatgtcat tggtcgagta gacgttgcgt gggttccaca tcatccagcc gaccgtgccg
     6961 gcgtcgcgcg aggccttgac ctgtttgccg atttggtcgg gcccgaaaac cacgccgccg
     7021 aaggcatagt cggtgaaggc ctgcagccag ggccgatagc gcgccggctt gtcggccgtg
     7081 cgctttttgc actcctcgag cgagcggtaa acgatctcat aggggttctg gaccgggttg
     7141 cggtagccgg ggatgccgaa ctggaagccc gatggataga gcatcggaga aataatatcg
     7201 accgccgtcg ccaggtcctc gacccgctgg ccgatgccgg tatcgttctg gttccagcag
     7261 acgtagccga aggagtccat cgccacgaac acgttgtacg gcaccagccg gcgccgcgcc
     7321 tcgcgcagga agtcggtgat cgccgctacg cgtccgttct cggtcgatgg ctgcgaaaag
     7381 accaccccct gcgaggcatc ggggaagcgc acatagtcga actggacttc gtcgaacccg
     7441 gcggcggcaa cctcctcggc gactccgatc gtgtagtccc aggcttcctt gcggtaggga
     7501 tcgatccagg cgagcccctc gcgatccttc cagatgccgc cgcccgtgtt gcgaacggcc
     7561 cattcgggat ggacgttgac cagcaggtcg tccttgaaca cgacgatgcg cgcgatcagg
     7621 tagaggtttt tggccttgag cgtgctcacc agttccttga gatcgggaat ggtgcggagc
     7681 ttgagcgcgc ctgccttggc ggcgagcggc agcgcgctgg gataggggat gaggccgcgg
     7741 tcgcccttca cgtcgatgac aagggcattg agcttgcttt tctggatcac ctcgagggcc
     7801 ggatcgagca gaaagggggc gccgatgccg tagacggtga gatagagcgc cttgggcaga
     7861 agcggcgtga gcttgaccgt atggggcgat gccgactcgt cgagagcgac ggtctcgcgg
     7921 gcgtaaccgg ccgcgcggac cttgattgcc agggtgccgt ccacccggta gagcccttgg
     7981 gcatcggtga gaagggcctt gtcgcccacg gtgacgatgg cgccggcaac cggcgcgcca
     8041 gtcgtgccgt cgacgaccgt gccctcgcgc tccacctcgc gcgccgcctc ttttcgatcc
     8101 tgggcgtaag ccattggcag caggagagaa caagcagcga cggcggcaac aagcagtttc
     8161 attgggagtc cttatttagc gggcagcagc ctttcgaagc ggtcgccgcg atcggcgtcg
     8221 gtgacgatga agcgcggcag gctcatgacc ttttcggtcc gcgtgacggg ccggcgctcg
     8281 attgagaagg cggcgacgta ccctgcttcc gaggccgcct tgatgaggtc gtcatcgtag
     8341 atgccgaacg gccaggccag cagatcgacc ttcagcccga ggcgctggtc gagcacggtc
     8401 ttggacttga ccaactggtc ctgcacgaac ttctcatagg ccgccggcgc caggcgcttc
     8461 ttgtcgacct tgaagttggg gtgccagaac gtgtgggact ggatgtcgac caggccggac
     8521 gccttcacct ccgccagctg ctcccaggtc atcgcatagg gggcgctggg attggagatc
     8581 gccgagggat agatgaacag ggtgacggga atctggaagc gtttgatcag tggaaacagg
     8641 tccgtgtaga cgctgcgatg gccgtcatcg gcaactagca ccacggaacg ttccggcggc
     8701 ggcgcttcgg gctcgttgta ggcttccagc agcttgcgca ggggaatgac ctgatagccg
     8761 cgctcctgga tcagcttgag ctggctctcg accaccgggg tcgtcaccgt catgtcgtcg
     8821 gtgagcacgg gaccgagccg atgatagagc aggatgggaa cgttgagcgg cggctctgcc
     8881 gcctcgctgg ccggacaaag aaacgacgac gtgaccacca gagccgtcac tagtgccgcc
     8941 agccaacgac ccatgaacca tcctgtcaaa ctcgacgccg aagtatctca aagaatttgg
     9001 ttattgtcat cgttcacgat tgcagaactc acggaccgcg atcacagcgt cggctattcc
     9061 gacacgttca atggaaacgc ccggcggaaa cgcgcccaac agccgcgtcg gcagccgcga
     9121 gtccagcatg acgaacacgc cgcgatcgtc ggcgcgccgg atcagccggc cataggcctg
     9181 cttcaagcgc agccgcgcca gcatgtcgtc ataggcattg gcgccggcgc cggccttctt
     9241 ccacgcctct ttgcgcgcac ggtggaggat gtcgggccgc ggccacggca cgcggtcgaa
     9301 cacgatcagg cgcagcgagc ggccaggcac atcgacgccg tcgcgcacgg catcggtgcc
     9361 gagcaggcag gaatgttcct cggcacggaa aatatcgacc agggtggcgg catccatgcc
     9421 gccgacatgc tgggcataaa gcggcaggcc ggcctcctcg agcgccggcg cgatcctctg
     9481 gtggacggcg cgcaggcggc cgatggcggt gaacaggccg agcgcgccgc cgcctgatgc
     9541 cacgaacagc tcgcgatagg cggcggccac ctgaccgaaa tcgtcgcgct tgacgtcgcg
     9601 cacgatcaag acgcgcgtgg cgtcgacata atcgaagggc gaggccatgg cggcgcgcat
     9661 cgccggcagg ctgaggtggc gcgtgccggt gcgagcctcg gccaccgtcc agtcggccag
     9721 cgcctcggcg tcctcgtcgt tggcggcggc cggcacgccc agcgaatcgc gcagcgtcgc
     9781 cgaggtgatg accgcgccat gggccggccg caccaccgca ttgatgaacg gctcggtggg
     9841 atcgagatag tggcggtaca tgccgacatc gatctcgcgg ttctggctct tttcgatggc
     9901 gaaccagtcg acgaaggcgg gatcgggctc gttatgcagg ccgcgcaaca tggcgcgcca
     9961 ggcttccagc gtgagctcgc agcggttggc gagcgagcgc gccacgccct cgatgcgcgc
    10021 gcgctgcccc gaatcgagct tgtcggcttc gccctcgagc ttggcgcgca aggcggcgcg
    10081 cagctggcgc accggcgcca gcatcagctc cagcgcctcg cccagccgat cggccgcttc
    10141 cagcaggccg tgattgagcg ggcgcacgtc gcattcctgg ccgaagccct ggtcctcgcc
    10201 ggacgcccgc gcgcgcacct gctggcgcac cagggccaaa aactcctcgg ccggtcccag
    10261 caccgtgccg tcgaccagcc gcgtctgcca gttgggcgag ggcagctgtt gcgccaggct
    10321 gagcaggcgg cgcagcgcct gctgggcgtc gaggttgtcg cctaaaaggt cgttgaggcg
    10381 gcgttccagc ccgcgggcgc ggctgccgcg gcggccctcg gcgcctagca gccagcggcg
    10441 caggtcggag gcttcgacgc cgctcaggtg cgcgccgaag gccgaatcgg cggcgtcgaa
    10501 caggtgatgg ccctcgtcga acacgtagcg cagcgggcgc gtagcgtcgt cgagcccgcc
    10561 catcgccgcc tggatcatga ccagcgcgtg gttggcgatc acgatgtcgg cctggcgggc
    10621 gcgccggatg gtgcgttcga cgaaacattt gcggtagtgc tcgcaggccg aatagatgca
    10681 ttcgccgcgc cggtcggcca gccgggtgat gcggctgcgg ccgagaaggt cgagcagcca
    10741 ggccggcagg tcgccgccga ccatgtcgcc gtcgcggctg ttgagcgccc agcgcgccag
    10801 caggcccaag ccgacggcgt tctcgggcac caagccggtg cgcatcaccg cctcctggaa
    10861 attcaacagg cagagatagt tctcgcggcc cttgcggatc accacccggc ggcgcttctc
    10921 ggccgaatcg cggtgcaggc ggtcgagctc gttgtcgatc tggcgctgca ggttgcgggt
    10981 gtaggtggcg atccagaccg gcgcgccgtt cttctccgcc catagcgagg ccggcgcgac
    11041 atagcccagg gtcttgccga ctcccgtgcc ggcctcgacc agcacgacgt tcggcttgtc
    11101 ctcctgctcg cgcggcgcga aggcctggct ggcggcggag gcgtagtcgc tttgcgtcgg
    11161 ccgcgcctcg gccaggttgg ggccggcggc gatcagctgg gcgagccgca ggcgggcctc
    11221 gcgcggctcg accggattgc tggcgggcgg cggttgcggc ggcggctctt cccagatcgg
    11281 caggttcctc cagacatcga ggccggcgcc gggtcgcggc ttcccggcga cctggtcgag
    11341 gccgagcgcc gcgagcacgt ccgcgcccca cgcccactgg ccgcgcgcca tggcaagcgc
    11401 ggtgtccttc atctcgggcg aggcgagcgc cgccat
//
LOCUS       DASWGA010000803         7681 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_465272, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000803 DASWGA010000000
VERSION     DASWGA010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7681
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465272"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VF991_18730"
     CDS             <1..330
                     /locus_tag="VF991_18730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance MFS efflux pump"
                     /protein_id="HEX9558534.1"
                     /translation="MVIYAVAPTGPWFWLGVPVMALWGVVGPSLQDMMTRRVSPSEQG
                     QLQGANSSSRSVAGLVGPGIFTATFAYLIDWLPGAPFLLAAFLLVAAAGVTWVVTAPP
                     PRADPAR"
     gene            complement(293..652)
                     /locus_tag="VF991_18735"
     CDS             complement(293..652)
                     /locus_tag="VF991_18735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558535.1"
                     /translation="MLFGEGPLASASSEGDAAVFADRDIARHQTRSFDIFAFNDNELE
                     DDLPTLHELLYLRRGLAQPGGKLPLFDLDGQNVDAAIVRRCLERGWAEPWFNNPLKPD
                     WLVCKLTEQGRRAAAGP"
     gene            complement(792..1325)
                     /locus_tag="VF991_18740"
     CDS             complement(792..1325)
                     /locus_tag="VF991_18740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEX9558536.1"
                     /translation="MAVSVQTAERRIEKSAQAFRTISEVASELDVPQHVLRFWESKFS
                     QVRPLKRGGGRRYYRPEDIDLLRRIRTLLYEDGYTIKGVQRLLKEGRGRLPQQQRIDL
                     AAESALENLRIVSARAEAMTGGGTRQPLPRTGPQPSTTTPRAAMLDLHKRREIETVLE
                     DLEQALTQLRSTLKANN"
     gene            complement(1354..1665)
                     /locus_tag="VF991_18745"
     CDS             complement(1354..1665)
                     /locus_tag="VF991_18745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEX9558537.1"
                     /translation="MEGRTITRADLSESVFQEVGLSRNESSDLVETILSEVVEALARG
                     ESVKISSFGSFTVRDKGQRVGRNPKTGQEVPILPRRVLVFRASNVLKSLINGASGESK
                     G"
     gene            complement(1802..2773)
                     /locus_tag="VF991_18750"
     CDS             complement(1802..2773)
                     /locus_tag="VF991_18750"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEX9558538.1"
                     /translation="MIRSVVQGCGAYLPDRVVTNDELAKKVDTSDEWIQQRTGIKQRH
                     IAADGEFTSHLAIKAAQRALDDAGLKASDLDLIVLGTATPDETFPATATRVQSGLGMT
                     RGAAFDVQAVCAGFIYGVSVADSMIRSGIASTALVIGAETFSRILDWNDRGTCVLFGD
                     GAGAIVLRGEEGKGTSADRGVLANALHSDGRQHDILYVDGGPSSTRTTGYLRMEGREV
                     FKHAVVNMAAVVGEVLDQAGLQPRDIDWLVPHQANKRIIDSTGRKLGLAPERVVVTVD
                     RHANTSAASIPLALDTAVKDGRIKRGDLLLLEGIGGGLAWGASLVRW"
     gene            complement(2770..3849)
                     /gene="plsX"
                     /locus_tag="VF991_18755"
     CDS             complement(2770..3849)
                     /gene="plsX"
                     /locus_tag="VF991_18755"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEX9558539.1"
                     /translation="MSAGKIVLALDGMGGDHAPDVVVNGADIARERYPGTSFLLFGDP
                     ARLKPLVDKRKGLAKVLEIVPAEDAVLAEDKPSFALRRRRKSSMWLAVDAAAHGRADT
                     VVSAGNTGALLAISMFAMRMVEGAHRPALASFLPTFRGETVMLDLGANLECDADNLAE
                     FAVMGSVFAQVLLGLDRPKVGLLNVGSEELKGHEELRQAAGWLRRKGSPIDFHGFVEG
                     NDITSGMIDVVVADGFTGNVALKSIEGTAKLYTQFVRDTFRTSTFAKIGYLFAAGALI
                     KMSKRVDPRRYNGGVFLGLDGICVKSHGGTDALGFAYAIGVAVDLVRYEYKNKLVEGL
                     AKLRQVTSAAETPSSPALRASGGAE"
     gene            complement(3900..4094)
                     /gene="rpmF"
                     /locus_tag="VF991_18760"
     CDS             complement(3900..4094)
                     /gene="rpmF"
                     /locus_tag="VF991_18760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEX9558540.1"
                     /translation="MAVPKKKVSKSRRNMRRSHHALPSMAYVECKNCGELKRPHSVCS
                     HCGYYREDMPVLADSASAEK"
     gene            complement(4210..4710)
                     /locus_tag="VF991_18765"
     CDS             complement(4210..4710)
                     /locus_tag="VF991_18765"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEX9558541.1"
                     /translation="MDIVASDGERAALAKRFGFLGLPAFSARVTVDHRPGGQIVVEGR
                     LRGRIVQACVLSLDPVPQDLDDTFRVVFKKDLAEERDPESGEAVLNAQADAPEPLTGN
                     LLDVGEIVAEQLSLAADPYPRRPGAKLEDVLPKPRREGRKGPTEPRRHPFAGLAALRD
                     KPRRGR"
     gene            complement(4804..5298)
                     /locus_tag="VF991_18770"
     CDS             complement(4804..5298)
                     /locus_tag="VF991_18770"
                     /inference="COORDINATES: protein motif:HMM:NF015914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome C chaperone family protein"
                     /protein_id="HEX9558542.1"
                     /translation="MFRRRKSEETFAAALYARTAEEARAPDLFEACGIPDTLDGRFDS
                     LALHAALMIGRLQREADGEALAQAFFDAMFRHLDLTLREIGVQDLGVGRRIKIMAEGL
                     HGRALAYREALAGGPTPLSEVLRRNAYGGRPPAESEPVSRLEARVRRYADQLAARSRE
                     DLII"
     gene            5393..5875
                     /gene="bamE"
                     /locus_tag="VF991_18775"
     CDS             5393..5875
                     /gene="bamE"
                     /locus_tag="VF991_18775"
                     /inference="COORDINATES: protein motif:HMM:NF016258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEX9558543.1"
                     /translation="MRRTVSLGMFPLALAVVMLAACDNIADLRGFAPTPGTVDKLEVG
                     TQSREDIQRLIGSPSSVATFNPNVWYYISEKQEYWGPSRPWISEQSVIQITFNETGRV
                     QNIKYFDLKDAQNITMVARITPTSGKELTVLEQILGNVGKFSGPRQQGNPGAPTTGGP
                     "
     gene            complement(5930..>7681)
                     /locus_tag="VF991_18780"
     CDS             complement(5930..>7681)
                     /locus_tag="VF991_18780"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HEX9558544.1"
                     /translation="DIAFKSGAITGMLVVGLGLLGVSIYYFILRANMVGTDLRPVLEA
                     MVALGFGASLISIFARLGGGIFTKGADVGGDMVGKVEAGIPEDDPRNPATIADNVGDN
                     VGDCAGMAADLFETYAVTTVATMVLASIFFAADPALLAKVMMFPLAIGGACIITSIIG
                     TYFVRLGSDGGIMWAMYKGVIVAAVLSIPAIWFVTSYLIGMDTVLKVGDRSFTGMSLF
                     WCSLVGLAITGLIVWITEYYTGTDYRPVKAVAQASVTGHGTNVIAGLAMSMEATALPA
                     LLICAGIVICYVLAGLFGIAIATTAMLALAGMVVALDAYGPVTDNAGGIAEMAGLPKE
                     VRKNTDALDAVGNTTKAVTKGYAIASAGLGALVLFAAYTSDLAYFIAQGKLGVKAVSF
                     SLQNPYVVVGLLIGGGLPYLFGGMSMLAVGRAAQSVVEEVRRQFREKPGIMKGTDRPD
                     YGRAVDMLTKAAIKEMMIPSLLPVLSPIVLYFVIAAIAGKADAFAAVGAMLLGVIVTG
                     IFVAISMTAGGGAWDNAKKYIEEGHFGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPM
                     IKITNIVALLLLAVLAH"
BASE COUNT         1308 a         2567 c         2514 g         1292 t
ORIGIN      
        1 atggtgatct atgccgtcgc gcccaccggc ccgtggtttt ggctcggcgt gccggtgatg
       61 gcgctgtggg gcgtggtcgg cccctctctg caggacatga tgacccgccg ggtcagtccg
      121 tcggaacagg gccagctgca gggcgccaac agttcatcgc gcagcgttgc cgggctggtc
      181 ggacccggca ttttcaccgc gaccttcgcc tacttgatcg attggctgcc cggcgcaccg
      241 tttctgctcg ccgctttcct gttggtcgcg gcggccggcg tgacctgggt ggttacggcc
      301 ccgccgccgc gcgccgaccc tgctcggtga gcttgcacac cagccagtcg ggcttcagcg
      361 gattgttgaa ccatggctcg gcccagccgc gctccaggca acggcgcacg atggcggcgt
      421 cgacattctg gccgtcgagg tcgaatagcg gcaacttccc acccggctgg gcgagcccgc
      481 ggcgcaggta aagcagctca tgcagagtcg gaagatcgtc ctccaactca ttgtcgttga
      541 atgcaaatat atcgaatgag cgcgtctgat gacgcgcgat atcacgatca gcaaacacgg
      601 cggcgtcccc ctctgacgat gccgaggcca acggtccctc gccgaacagc ataccctcgt
      661 tcggcggaaa accaagaaaa atcaggcagt tgccgctgtt tcctgcggcc gtcacccgat
      721 ctggtggctg actgaactca acgcgccaag tccttggatc gccgcccccc ggcgggatcc
      781 gcggacttga gttagttgtt cgctttcagc gtgctgcgca gctgcgtcag cgcctgctcg
      841 aggtcttcga gcaccgtttc gatctcgcgc cgcttgtgca ggtcgagcat ggcggcgcgc
      901 ggcgtggtgg tcgacggctg cgggccagtg cgcggcagtg gctggcgcgt cccgccgccg
      961 gtcatcgctt cggcgcgagc cgatacgatg cgcaggttct cgagcgcgct ttcggccgcc
     1021 aggtcgatcc gctgctgctg tggcaggcgc ccacgaccct ccttcaagag acgctgcacg
     1081 cccttgatgg tgtagccgtc ctcgtagagc agcgtgcgaa tgcggcgcag aagatcgatg
     1141 tcctccgggc ggtagtaacg ccggccgccg ccccgcttga gcggacggac ctggctgaac
     1201 ttgctttccc agaaccgcag cacatgctgc ggcacgtcga gctcgctcgc gacttcgctg
     1261 atggtgcgaa acgcttgcgc cgacttctca atccgccttt ccgcggtctg aaccgatacg
     1321 gccatgacaa gacccccaca ttaatttccc caattacccc ttgctctcgc cggacgcccc
     1381 gttgatcaaa gacttcagga cgttcgacgc gcgaaagacg agtacgcggc gcggcaggat
     1441 cggaacttcc tgccccgtct tcggattgcg gcccacgcgt tggcccttgt cgcgaaccgt
     1501 gaagctcccg aacgacgaga ttttcaccga ttcgccacgc gccagtgcct ccacgacttc
     1561 ggagagaatc gtctccacga gatcgctcga ttcgttgcga gacaggccca cttcctggaa
     1621 caccgactcg cttaaatcgg cacgcgtgat agtccggcct tccatccggt acccttcctt
     1681 cccccagtta atccttactc taaggttgga aagcggtcaa tatcagtagg atagaggctg
     1741 gccttgaatc gccgtctgtt ctcgttccgt tgcgcaggga attgtttcat tcgtcggcag
     1801 gctaccagcg gacgagcgag gctccccagg cgaggccgcc gccaatcccc tccagcagca
     1861 aaagatcgcc ccgtttgatg cggccgtcct tgaccgccgt gtcgagcgcc agcgggatcg
     1921 acgcagccga cgtattggcg tggcggtcga ccgtgaccac cacgcgctcc ggcgccaggc
     1981 caagcttgcg gccggtgctg tcgatgatgc gcttgttggc ctggtggggc accagccagt
     2041 cgatgtccct gggctgcagg ccggcctggt ccaacacctc gccgaccacc gcggccatgt
     2101 tgaccaccgc gtgcttgaac acctcgcggc cttccatgcg cagatagccg gtcgtcctgg
     2161 tcgacgacgg accgccgtcg acgtagagga tgtcgtgctg gcggccgtcg gaatgcagcg
     2221 cgttggcgag cacgccgcgg tcggccgaag tgcccttgcc ctcctcgccg cgcagcacga
     2281 tggcgccggc gccgtcgccg aacagcacgc aggtgccgcg gtcgttccag tcgaggatgc
     2341 gcgagaaagt ctccgcaccg atcaccagcg ccgtcgaagc gatgccgctt cggatcatgc
     2401 tgtcagccac cgacacgcca tagatgaagc cggcgcaaac ggcctgcacg tcgaaggccg
     2461 cgcccctggt catgccgagc cctgactgca cgcgtgtcgc ggtggcggga aacgtctcgt
     2521 cgggggtcgc cgtccccagc acgatgagat cgaggtcgga cgccttcagg ccggcatcgt
     2581 cgagcgcccg ctgcgcggcc ttgatggcga gatgcgaggt gaactcgccg tcggccgcga
     2641 tatggcgctg cttgatgccg gtgcgttgct ggatccactc gtcggaggtg tcgacttttt
     2701 ttgccagctc gtcgttggtg acgaccctgt ccggcagata ggcgccgcac ccctgaacga
     2761 cggaacggat cactcggctc ctccgcttgc ccgcaacgcc ggcgaagacg gcgtctcggc
     2821 agccgacgtc acctggcgca gcttggccag gccctcgacc agcttgttct tgtattcgta
     2881 gcggaccaga tcgaccgcaa cgccgatggc ataggcgaag cccagggcat cggtgccgcc
     2941 gtggctcttg acgcagatcc cgtcgagacc caggaacacg ccgccattgt aacggcgcgg
     3001 atcgactcgc ttgctcatct tgatcaaggc gccggcggcg aacaggtagc cgatcttggc
     3061 gaaggtcgag gtccggaagg tgtcgcgcac gaactgggta tagagcttgg cggtgccctc
     3121 gatcgacttc agcgcgacat tgccggtgaa accgtcggcc accacgacgt cgatcatgcc
     3181 cgaggtgatg tcgttgccct cgacgaagcc atggaagtcg atcggcgaac ccttgcggcg
     3241 cagccagccg gccgcctgac gcaactcctc gtgacccttg agctcctcgg agccgacgtt
     3301 cagcagcccg accttgggcc ggtcgaggcc aagcaggacc tgggcgaaga cgctgcccat
     3361 gaccgcgaac tcggcgagat tgtcggcgtc gcattctagg ttggcaccga gatcgagcat
     3421 caccgtctcg ccgcgaaagg tcggcaggaa cgaggcgagc gccggccgat gcgcgccctc
     3481 caccatgcgc atggcgaaca tcgaaatagc gagcagcgcg ccggtgttgc cggccgacac
     3541 tacggtgtcg gcgcgaccgt gggccgccgc gtcgacggcc agccacatgc tcgacttgcg
     3601 gcggcggcgc agcgcaaagg atggcttgtc ctcggccagc accgcatcct cggctggcac
     3661 gatctcgagc accttggcca gacccttgcg cttgtcgacc aggggcttga gccgcgccgg
     3721 atcgccgaac agcaggaacg acgtgccggg atagcgctcg cgcgcgatat cggcgccgtt
     3781 gacgacgacg tcgggcgcgt gatcgccgcc catgccgtcg agcgccagga cgatcttgcc
     3841 ggcgctcatc gggatgctct gcctgtcggg tgccagcgca tggccggcgg cgtgctggat
     3901 tacttctcgg ccgacgcgct gtcggccagg acaggcatgt cctcgcggta gtaaccgcaa
     3961 tgcgagcaca ccgagtgcgg ccgcttcagc tcgccgcaat tcttgcactc gacataagcc
     4021 atcgagggca gcgcgtgatg ggaccggcgc atgttgcggc gggacttcga aaccttcttc
     4081 ttgggaacgg ccatgacgat ctccacgaga gggcggcggc tgtcgcctgg ccccaaaaaa
     4141 gctgcggccg cgctctatag gcgcggcagg cggccttctc tagccaaaac gtcccgccgc
     4201 cgcaacaatt tagcgcccgc ggcgcggctt gtccctgagc gcggccaggc cggcgaaagg
     4261 atgacgccgc ggctcggttg ggcctttacg gccctcgcga cggggtttag gcagcacgtc
     4321 ttccagcttg gcgccgggcc gccgcggata gggatcggcg gccagggaaa gctgctcggc
     4381 cacgatctcg ccgacatcaa gcagatttcc cgtcagtggc tcgggtgcgt cggcctgggc
     4441 attcaacacc gcctcaccgc tctccggatc gcgctcctcg gccaggtcct tcttgaagac
     4501 gacccgaaag gtgtcgtcga ggtcctgcgg caccgggtct agcgagagca cgcaggcctg
     4561 cacgatcctg ccgcgcaacc gaccctcgac cacgatctgg cctcccggac gatgatcgac
     4621 ggtgacccgg gcggaaaacg ccggcaggcc caggaaaccg aagcgtttgg cgagggcggc
     4681 gcgctcgcca tcgctggcga caatatccaa ccccgttccc gcggttccca tccggtcgag
     4741 atcgacgatt ctttcgatct cagatttctg tttattttcc gtatattggg acattttctt
     4801 aaactatatt atcaagtcct cgcgagagcg cgccgcgagc tggtcggcat agcggcgaac
     4861 acgcgcttcg agccgcgaca ccggctcgct ctcggctggc ggcctaccgc cataggcgtt
     4921 gcggcgcaag acctcgctga gcggggttgg cccgccggcc agggcttcgc ggtaggccag
     4981 cgcccggcca tgcaggccct cggccatgat cttgatgcgc cggccgacgc ccagatcctg
     5041 cacgccgatc tcgcgcaggg tgaggtcgag atggcggaac atggcgtcga agaaggcttg
     5101 cgccagcgcc tcgccgtcag cctcgcgctg cagccggccg atcatgaggg cggcgtgcag
     5161 ggccagcgaa tcgaagcggc catcgagcgt gtcgggaatg ccgcaggcct cgaacaggtc
     5221 gggcgcgcgc gcctcctcgg ccgtgcgcgc ataaagggcg gcggcgaagg tttcctctga
     5281 tttgcgacgg cgaaacactg gtcctgtccc ccggcagcgc gccacagttg acccggcgcg
     5341 agggtcacga catcttggcg agcctctttc cgacgaaccc aagaagccgt ccatgcgtcg
     5401 cacagtctcg ctcggtatgt tcccgcttgc ccttgccgtc gtcatgctgg cggcctgcga
     5461 caacattgcc gatctccggg gcttcgcgcc gacgccgggg acggtcgaca agctcgaggt
     5521 cggcacgcag agccgcgagg acatccagcg cctgatcggc tcgccgtcgt cggtggcgac
     5581 gttcaatccg aacgtctggt actacatcag cgagaagcag gaatactggg gcccgtcgcg
     5641 gccgtggatc agcgagcaga gcgtcatcca gatcacgttc aacgaaaccg gccgggtcca
     5701 gaacatcaag tatttcgacc tcaaggatgc gcagaacatc accatggtgg cgcgcatcac
     5761 gccgacctcc ggcaaggagc tgacggtgct cgagcagatc ctgggcaacg tcggcaagtt
     5821 cagcggtccc aggcagcagg gcaacccggg cgcgccgacc accggcggtc cctgacaaag
     5881 aaaagccccg gcttgaggcc ggggcttttg cgctggcttg acctgcagct cagtgcgcga
     5941 gcacggcgag cagcagcagg gccacgatgt tggtgatctt gatcatcggg ttcacggcgg
     6001 ggcccgccgt gtccttgtag ggatcgccca cggtatcgcc ggtcacggcg gccttgtggg
     6061 cctccgaccc cttgccgccg aaatggccct cttcgatgta cttcttggca ttgtcccagg
     6121 cgccgccgcc cgccgtcatc gagatggcga cgaagatgcc ggtgacgatc acgccgagca
     6181 gcatggcgcc gaccgccgcg aaagcgtcgg ccttgccggc gatggcggcg atcacgaagt
     6241 acagcacgat cggcgacagc accggcagca gcgaggggat catcatttcc ttgatcgccg
     6301 ccttggtcag catgtcgacg gcgcggccgt aatccgggcg gtcggtgccc ttcatgatgc
     6361 cgggcttctc cctgaactgg cggcgaacct cctcgaccac cgactgggcg gcgcggccga
     6421 cggccagcat cgacatgccg ccgaacaggt acggcaggcc gccgccgatc aacaggccga
     6481 ccacgacgta ggggttctgc agcgagaagc tcaccgcctt cacgccgagc ttgccctggg
     6541 cgatgaagta ggcgaggtcc gaggtgtagg ccgcgaacag caccagcgca ccaagaccgg
     6601 ccgaggcgat ggcgtagccc ttggtgacgg ccttggtggt gttgccgacg gcgtcgagcg
     6661 cgtcggtgtt cttgcgcact tccttcggca ggcccgccat ttcggcaatg ccgccggcat
     6721 tgtcggtgac cgggccatag gcgtcgagcg ccaccaccat gccggccagc gccagcatgg
     6781 cggtggtggc gatggcgatg ccgaacaggc cggccagcac gtagcaaatc acgatgccgg
     6841 cgcagatcag cagcgccggc agcgccgtcg cctccatcga catcgccaga ccggcgatga
     6901 cgttggtgcc gtggccggtg accgaggcct gcgccacggc cttgaccggc cgatagtcgg
     6961 tgccggtgta gtactcggtg atccacacga tcaggccggt gatggccagc cccaccagcg
     7021 agcaccagaa cagcgacatg ccggtgaacg accggtcgcc gaccttgagc accgtgtcca
     7081 tgccgatgag gtagctggtg acgaaccaga tcgccgggat cgacagcacg gcggccacga
     7141 tcacgccctt gtacatcgcc cacatgatgc cgccatcgga gccgaggcgg acgaagtagg
     7201 tgccgatgat cgaggtgatg atgcaggcgc cgccgatggc cagcgggaac atcatcacct
     7261 tggccagcag tgcgggatcg gccgcgaaaa agatcgaggc cagcaccatg gtggcgacgg
     7321 tcgtcaccgc gtaggtctcg aacaggtcgg cggccatgcc ggcgcagtcg ccgacattgt
     7381 cgccgacgtt gtcggcgatg gtggccgggt tgcgcgggtc gtcctcggga atgccggctt
     7441 cgaccttgcc gaccatgtcg ccgccgacgt cggcgccctt ggtgaagatg ccgccgccca
     7501 agcgggcgaa gatcgagatc agcgaggcgc cgaagcccag cgcgaccatc gcctccagca
     7561 ccgggcgcag atcggtgccg accatgttgg cgcgcaggat gaaatagtag atggagacgc
     7621 cgagcaggcc gaggccgacc accagcatgc cggtgatggc gccggatttg aaggcgatgt
     7681 c
//
LOCUS       DASWGA010000804         7788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_731151, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000804 DASWGA010000000
VERSION     DASWGA010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7788
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_731151"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..663)
                     /locus_tag="VF991_18785"
     CDS             complement(<1..663)
                     /locus_tag="VF991_18785"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: protein motif:HMM:NF009896.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEX9558545.1"
                     /translation="MDTLTYWNGTWHEGNPAILGPRDHAFWLGSMVFDGGRAFEGCGP
                     DLDLHAERVVRSARSLGLNPTKTAKEILDLMHEAIRRFGPKAELYVRPMFWAMKGGPG
                     PISVDADSCQFLLCVYHAPMRAGTPLTLGLCRTIRRPTPESAPTDAKASCLYPNSSRG
                     VAEMLKRGFQNGVVLDALGNVAETCSSNLFLAKDGKVATPVPNGSFLAGITRNRTIKL
                     LRS"
     gene            1018..1473
                     /locus_tag="VF991_18790"
     CDS             1018..1473
                     /locus_tag="VF991_18790"
                     /inference="COORDINATES: protein motif:HMM:NF024189.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YXWGXW repeat-containing protein"
                     /protein_id="HEX9558546.1"
                     /translation="MLKRIAITSLAAAAFLSTAVASASLTPAAAQLSITFGSPPPPPV
                     YEMVPAPRVGYVWAPGHYVLVNDRYVWTRGQWMAERPGYRYVSPTWERVYIGGREQWR
                     HVPARWDRNGDGIPDRYQRQSERGPWGDRDHDGIPNAFDRYDNRYDYRR"
     gene            1607..3115
                     /locus_tag="VF991_18795"
     CDS             1607..3115
                     /locus_tag="VF991_18795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase family protein"
                     /protein_id="HEX9558547.1"
                     /translation="MASLTIRLHPADNVVVARMDVLPGTNIEGEVAAATRVPPGHKIL
                     TRSVKKGEPLRKYNQIIGFATEDLEPGAHIHTHNCVMGDFERDYAFCADAHPTDHITP
                     PATFQGYRRADGRAATRNYLGIVTTVNCSAATSRMIAKRIEPMLAEFPNIDGVVPLTH
                     GGGCGMAASGLEMDVLRRTLAGYVRHPNMAAVVVLGLGCEANQISGLMNAEGLKEGPK
                     LIPMAIQDEGGVSKTVMRATGFLKELLPEANDVTREPIPASELILALQCGGSDGYSGI
                     SANPALGAAVDLLVRHGGTAVLSETPEIYGAEHLLTRRAASRAVGEKIVERIRWWEEH
                     CARTGGEMNNNPSPGNKAGGLTTILEKSLGAVAKGGTTNLVDVYKYAEPITAKGFVYM
                     DSPGYDPVSATGQVAGGANVLCFTTGRGSVFGCKPTPSLKLATNSSLYRRMTDDMDIN
                     CGTIVDGEETIEDNGRRIFELILRTASGQKTKSEALGIGDDEFEPWKIGATM"
     gene            3353..3559
                     /locus_tag="VF991_18800"
     CDS             3353..3559
                     /locus_tag="VF991_18800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX9558548.1"
                     /translation="MATGTVKWFNATKGFGFIQPSDGGKDVFVHISAVERAGLNGLNE
                     GQKVSYEIATERGRSAAVNLKAAE"
     gene            3855..5246
                     /locus_tag="VF991_18805"
     CDS             3855..5246
                     /locus_tag="VF991_18805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9558549.1"
                     /translation="MPADLHYLSLDEVARRLKARTLSSVEATRAILDRIDKIDPKLKS
                     YATLTPERALQDAARLDAETAAGTSRGSLHGVPIAVKDLCNTAGVATAAGMAIHRRNV
                     PDKDATVVARLKRAGAVILGKLQMTEGAYGLHHPTVDPPVNPWNAAYWTGVSSSGSGV
                     ATAAGLCFASLGSDTGGSIRFPSAMNGLTGLKPTWGRVSRAGVFPLAESLDHIGPMCR
                     SALDAALVLGVIAGADPDDPTASPQPVPDYAAAIGAGVTGRRLGMPTNLLGMDADSRR
                     AVDGAAMTLQSQGATLVDVALPELDEATLKWIPLCGLEAALAHEATFPSRRAEYGPDL
                     AALIDLGRGLGGLELGKLQLVRARVKGEIERLLASVDLLLMPVMGAATPTLAMLKAVA
                     RTSQHIAARLRYTAPFDMSGHPTLTLPGGITSDGVPVGFQIVGRAFDEATILAAGHAY
                     QQVTDWHLRRPPL"
     gene            5348..7432
                     /locus_tag="VF991_18810"
     CDS             5348..7432
                     /locus_tag="VF991_18810"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9558550.1"
                     /translation="MISIFRKHPRLKPTILTAFFFLTVPVFFTIIAVTYYSNDDIARK
                     NARQLVERFRTDALENIQDDFDPLKSLVRSAATLGEQSPDFYASDQSLKYFYSILLHS
                     PKIVSVYVALADGAFRQTRRVDPAAMIQDKLPPQGTRYAYRWVLPKAGAPTLDRYLFL
                     DTDLRELGSTEQPTDYDPRTRLWYRSAVRAGTTMISDPDIFAALGLIGFTVAAPFSSN
                     GKLIGVAAADITLDDLGAYLADRKVSPRTLSYILDGQGRVIAASDLSKTYTSVVDGRL
                     ELRHISSLDDTLPAVAFAARPRGSEDMFSLKHDGTEYLASVSTLASEFGKKWQLFIIT
                     PLSDFTGPFQRNNDYLVAFGLAATVIQILIIYLLTSVISAPLEKLAFKVGKIQELGTE
                     QLPSINSPIREISVLSKAIDTLDVAVKSFSAFVPVGLVTQLLQTEQKLELGGHSRFLT
                     IFFSDLEAFSSLSEEVPSQELLLRVSAYLELVTKTVNQEHGTIDKFLGDGVMAFWGAP
                     ALLEDHAWRACVAALRIQRGMEALNERWRAEGMKPLNIRVGIHSDAVLVGNIGSKERM
                     SYTVMGDGVNVAARLEGINKEYRTHICISHAVFKEAGERLCVRPIDDVTVKGRRSKIP
                     IYELLGVFGADDPGLEPDAATLKLCRMTRLAYEALIQEDFVLAARRYREILAEFPDDP
                     VASALAGRLVRA"
     gene            7469..>7788
                     /locus_tag="VF991_18815"
     CDS             7469..>7788
                     /locus_tag="VF991_18815"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX9558551.1"
                     /translation="MVSSKPREVPDPRSGLALAALRPSEYTAALIQVLQAKRTCVQGA
                     RVLEIGSGSGVVLAALGALGAASLCGIDIEEDAVTSGMLLLDELGHGKVAEFHQGDMW
                     LPVG"
BASE COUNT         1307 a         2633 c         2542 g         1306 t
ORIGIN      
        1 cgagcgcagg agcttgatcg tgcggttgcg ggtgatgccg gccaggaaac tgccgttggg
       61 caccggggtc gccaccttgc cgtccttggc caggaagagg ttggagctgc aggtctcggc
      121 cacgttgcca agtgcatcga gcacgacgcc gttctggaag ccgcgcttca gcatctcggc
      181 cacgccgcgt gaggaattgg gatagaggca cgaggccttg gcgtcggtcg gcgcgctctc
      241 cggcgtcggc cggcggatgg tgcggcagag gccgagcgtc agcggcgtgc cggcgcgcat
      301 cggcgcgtga tagacgcaga gcaggaactg gcaggaatcg gcgtcgaccg agatcgggcc
      361 cggcccgcct ttcatcgccc agaacatcgg ccgcacatag agctcggctt tgggcccgaa
      421 gcggcggatc gcctcgtgca tcaggtcgag gatctccttg gccgtcttgg tcgggttcag
      481 ccccagcgac cgggccgagc gcacgacgcg ttccgcatgg aggtcgaggt ccggcccgca
      541 gccctcgaag gcgcggccac cgtcgaatac catcgagccc agccagaagg cgtgatcgcg
      601 cgggcccagg atcgccgggt tgccctcgtg ccacgtgcca ttccagtagg tgagcgtgtc
      661 cattgccaaa agtctccgcg tcggaagcgg gcgcttctag cagaccatga gcggcgcggc
      721 caacctcgcc ccctccctgt tggcactgag tgcggcattc tgcttcgccg tcggcctgat
      781 cctgacctag tacggcctgc gcacggtgcc gtcctgccgc gtcggctcga ccgcgctggc
      841 gccgccgctg gtcaagctct ggggttattt tgctgctggc cggaacctga gcgtggcgga
      901 aaaagggcgg aatgggcgcg cgaattcctc caatccgccc gaaacgcccc aggggtgatt
      961 tgcgtaattc ttatcaggcg cgagcccata ccgggttgcg cctgaaggag gcaagtcatg
     1021 ttgaagcgta ttgcgatcac gtcccttgcc gccgccgcat tcctttctac ggcggtggcc
     1081 tcggcgtcgt tgacgccggc agccgcgcag ctgagcatca ccttcggctc gccgccgccg
     1141 ccgccggtct atgagatggt cccggcgccg cgtgtcggct acgtctgggc cccgggtcac
     1201 tacgtgctgg tgaacgaccg gtacgtgtgg accagggggc agtggatggc ggagcgtccg
     1261 ggctatcgct acgtgtcgcc gacctgggag cgcgtctata tcggcggccg cgagcagtgg
     1321 cggcacgtgc ccgcgcgctg ggaccgcaac ggtgacggca tccccgaccg ctaccaacgc
     1381 cagagcgagc gtgggccgtg gggtgaccgg gatcacgacg gcattcccaa tgcctttgat
     1441 cgttacgata accgctacga ctaccgccgc taggctgaac acctgaaccg acgaggaggc
     1501 gggctcgcgc aagcgggccc gctttctttt tggcccgcgg tccgatgacc ctctgttgat
     1561 ggacctcgca aacggctacg cttcagcctc tcgggaggaa cgaacaatgg catcccttac
     1621 catccggctg catcccgccg acaacgtcgt cgtggcgcgc atggacgtcc tgcccggcac
     1681 caacatcgag ggcgaggtcg cggcggccac gcgcgtgccg cccggccaca agatcctgac
     1741 ccggtcggtc aaaaagggcg agccgctgcg caagtacaac cagatcatcg gctttgccac
     1801 cgaggacctc gagccgggcg ctcatatcca cacccacaac tgcgtcatgg gcgacttcga
     1861 gcgcgactat gctttctgcg ccgatgccca tccgaccgac cacatcacgc cgccggctac
     1921 ctttcagggc taccggcgcg ccgacggccg cgccgcgacg cgcaactatc tcggcatcgt
     1981 caccacggtg aattgctcgg ctgcgaccag ccgcatgatc gccaagcgca tcgagccgat
     2041 gttggccgag tttcccaata tcgacggcgt cgtgccgctg acccatggcg gcggctgcgg
     2101 catggccgca tcgggcctgg agatggatgt gctgcgccgc accctggcgg gctatgtgcg
     2161 ccatcccaac atggcggcgg tggtcgtgct cggactgggc tgcgaggcca accagatctc
     2221 cggcctgatg aatgccgaag gcctgaagga gggccccaag ctcattccca tggccatcca
     2281 ggacgaaggc ggggtgagca agaccgtgat gcgcgccact ggcttcctga aggaactgtt
     2341 gcccgaggcc aacgatgtga cgcgcgagcc gatcccggcc agcgagctca tcctggcgct
     2401 gcaatgcggc ggttcggacg gctattccgg catctcggcc aatccggcgc tgggcgctgc
     2461 ggtcgacctg ctggtgcgcc atggcggcac ggcggtgctg tcggagacgc cggagatcta
     2521 tggcgccgag cacctgctga cacgccgcgc cgcctcgcgc gcggtcggcg agaagatcgt
     2581 cgagcgcatc cgctggtggg aggagcattg cgccaggacc ggcggcgaga tgaacaacaa
     2641 tccctcgccc ggcaacaagg ccggcgggct cacgaccatc ctcgaaaagt ccctgggtgc
     2701 agtcgcgaag ggtggcacga cgaacctggt cgacgtctac aaatatgccg agccgatcac
     2761 ggcaaaaggg ttcgtctata tggattcgcc gggctacgac ccggtgtccg ccacggggca
     2821 ggtggccggc ggtgccaatg ttttgtgctt cacgacgggc cgcggcagcg ttttcggctg
     2881 caagccgaca ccgtcgctca agcttgcgac gaatagctcc ctctatcggc gcatgactga
     2941 cgacatggac atcaattgcg ggaccatcgt cgacggcgag gaaacgattg aggataacgg
     3001 ccggcgcatc ttcgagctga tcctgcgcac ggcgtccggc cagaagacca aatccgaggc
     3061 gctgggcatc ggcgacgacg aattcgagcc ctggaagatc ggtgccacaa tgtaaacaca
     3121 accctggcaa ccaatcttga ctaatagacg ttacctgccc atatgcggcc ctacgacttg
     3181 cgaacttgcg aacttggcca tgccttggcg gcccagccca cagcggctac ggacttaccc
     3241 ccacgcgcta attccaaatt cttcgagttg tcgcggaccg ttgcaacgag cgcgcgggtc
     3301 gcgcgtggtt ctgtgtgtaa ggctcgacca actgactgcc aaggagacgt agatggcgac
     3361 aggtacggtg aagtggttca acgccaccaa gggttttggt ttcatccagc cgagcgacgg
     3421 cggcaaggat gtcttcgttc atatcagcgc ggtcgagcgg gcgggtctga acggcctcaa
     3481 cgagggccag aaggtgagct acgagatcgc caccgagcgc ggccgttcgg ccgcggtcaa
     3541 cctcaaggcg gccgaatagt cgtttgaaat cgtcccgctt gccgagcggg ccattccaat
     3601 tcgcaagaag atgaacgccg accgcgtgcc ggtcggcgtt tgtcgttctc gatgaggctc
     3661 tgccgcgctt gagcggcacg acaatcgcgg cgaacatatc cagtcgatga ataaaagttt
     3721 gtcgtctcgc gcggggtcac cccgcgctga agcgaagcga aggacctcat cgccgcttgc
     3781 cacgggcatg agatccttcg cttcgcttca gggcgggggt taccccgccc gcgatgacag
     3841 cctgggagtg agcaatgccg gccgatctgc actacctgtc gctcgacgag gtcgcgcggc
     3901 gcctgaaggc gcgcacgctg tcgtcggtcg aggcgacgcg ggcgatcctc gaccgcatcg
     3961 acaagatcga tcccaagctc aagagctacg ccacgctcac gcccgagcgt gcgctgcagg
     4021 acgccgcgcg cctggacgcc gagacggcgg ccggcacctc gcgcggttcg ctgcacggcg
     4081 tgccgattgc ggtaaaggat ctctgcaata ccgccggcgt ggcgacggcc gccggcatgg
     4141 ccatccaccg ccgcaacgtg ccggacaagg atgccaccgt ggtggcgcgg ctgaagcggg
     4201 ccggcgcggt gatcctcggc aagctgcaga tgaccgaagg cgcttacggg ctgcatcatc
     4261 ccaccgtcga tccgccggtg aacccatgga acgccgccta ctggaccggc gtctcctcgt
     4321 cgggttcggg cgtggcgacc gcggccggcc tctgctttgc ctcgctgggc tccgataccg
     4381 gcggatcgat ccgctttccc tcggccatga acggcctcac gggcctcaag ccgacctggg
     4441 gccgggtgag ccgcgccggt gtcttcccgc tcgccgaatc gctcgaccat atcggcccga
     4501 tgtgccgcag cgcgctcgat gcggcgctgg tgctgggcgt gattgccggc gccgatcccg
     4561 acgatccgac cgcctcgccg caacccgtgc ccgactatgc cgccgccatc ggcgccggcg
     4621 tgacgggccg caggctcggc atgccgacca acctgctcgg catggacgcc gattcccgcc
     4681 gcgccgtcga cggcgcggcg atgacgctgc agagccaggg cgcgacgctg gtcgatgtcg
     4741 ccttgcccga gctcgacgaa gcgacgctga aatggattcc cctgtgcggt ctcgaggcgg
     4801 cgctcgccca tgaggcgacc tttccgtcgc ggcgtgccga atacggaccc gacctcgccg
     4861 ccctgatcga tctcggacgc ggcttgggcg gcctcgagct cggcaagctg cagctcgtgc
     4921 gtgcccgcgt caaaggcgag atcgagcgct tgctggcgtc ggtcgacctg ctgctgatgc
     4981 cggtgatggg cgcggcgacg cccacgctcg cgatgctgaa ggcggtcgcc cgcacgtccc
     5041 agcacatcgc cgcgcgcctg cgctacaccg cgccgttcga catgagcggc catcccacgc
     5101 tcaccctgcc gggtggcatc acgtctgacg gggtgcccgt cggcttccag atcgtcggcc
     5161 gcgccttcga cgaggccacc atcctggccg ccggccacgc ctatcagcag gtcaccgact
     5221 ggcatctgcg gcgcccgccg ctctgatcag cggacccggc gcattcagat gcgccgggtt
     5281 cgctgatcgt tgcgtggacg ctgaatcgcc gatgctgtag gatacgccat tcgccacgac
     5341 ggccggcatg atcagcatct tcaggaaaca tccgcggcta aaacccacca tcctgacggc
     5401 tttcttcttt ctcaccgtcc ctgtcttctt caccatcatc gccgttacct actattcgaa
     5461 cgacgacatc gcgcgaaaga acgccaggca actcgtcgaa cgcttccgaa ccgatgcgct
     5521 ggagaacatc caggacgatt tcgatccgct gaaatcgctg gtccgctcgg cagcgacgct
     5581 cggcgaacag tcgccggact tttacgcctc cgaccaaagc ctgaaatact tctacagcat
     5641 cctgctgcac agcccgaaga tcgtcagcgt ctatgtcgcc ctggccgacg gcgcctttcg
     5701 ccagacccgc cgggtcgatc ccgccgcgat gatccaggac aagctgccgc cgcaaggcac
     5761 ccgctacgcc tatcgctggg tgctgcccaa agccggagcg ccgacgctcg atcgctacct
     5821 cttcctcgat accgatctcc gggagctcgg cagcaccgag cagccgacgg actacgatcc
     5881 gcgcacccgg ctgtggtatc gcagcgccgt tcgcgccggc acgaccatga tctccgaccc
     5941 cgatatcttc gcggcattgg gattgatcgg cttcaccgtg gccgcgccgt tctcgtcgaa
     6001 cggcaagctc atcggggtgg cggcggccga catcacgctg gacgatctcg gcgcctacct
     6061 cgccgaccgc aaggtcagcc cgcggacgct gagctacatc ctcgacggcc agggccgggt
     6121 gatcgccgcg tccgatctgt cgaagaccta taccagcgtc gtcgacggca ggctcgagct
     6181 tcgccatatc agctcgctcg acgacactct gcccgcggtc gctttcgcgg cgcgcccgcg
     6241 cggcagcgag gacatgttct ccctcaagca tgacggcacg gagtatctcg ccagcgtgtc
     6301 gacgctggcg tccgaattcg gcaagaaatg gcagcttttc atcatcacgc cgctgtcgga
     6361 ctttaccgga ccgttccagc gcaacaacga ctacctggtg gcgttcgggc tggcagcgac
     6421 cgtcatccag atcctgatca tctacctgct caccagcgtg atctccgcgc cgctcgagaa
     6481 gctcgccttc aaggtcggca agatccagga gctcggcacc gagcagctgc cgtccatcaa
     6541 ctcgccgatc cgcgagatct cggtcctgtc gaaggcgatc gacaccctcg atgtcgccgt
     6601 caagtcgttc tcggccttcg tgccggtcgg cctggtcacc cagctcctgc agacggaaca
     6661 gaagctggag ctcggcggcc acagccgctt cctcaccatc ttcttctccg acctcgaagc
     6721 cttttccagc ctctccgagg aagtgccgtc gcaggagctc ctgcttcgcg tgtcggccta
     6781 tctcgagctc gtcaccaaga ccgtcaacca ggagcacggc acgatcgaca agttcctggg
     6841 cgacggcgtg atggccttct ggggcgcgcc ggcgctgctc gaagaccacg cctggcgggc
     6901 ctgcgtggcg gcgttgcgca tccagcgcgg catggaggcg ctgaacgagc gctggcgggc
     6961 cgaggggatg aagccgctca acatccgggt cggcatccat agcgacgccg tcctggtcgg
     7021 caatatcggc tccaaggagc gcatgagcta caccgtgatg ggcgatggcg tgaacgtcgc
     7081 cgcccgcctg gagggcatca acaaggaata ccgcacccac atctgcatca gccacgcggt
     7141 gttcaaggaa gccggcgagc ggctctgcgt gcggccgatc gacgacgtga cggtcaaggg
     7201 gcggcggtcg aaaatcccga tctacgagct tttgggcgtg ttcggcgccg acgatccggg
     7261 cctcgagccc gatgccgcga cgctgaaatt gtgccggatg acgcggctcg cctacgaggc
     7321 gctgatccag gaagacttcg tcttggcggc gcggcgctat cgcgagatat tggccgagtt
     7381 tcccgacgat ccggtggcgt ctgccctggc cggacggctc gtcagggcat gacgggcgcg
     7441 gccgtgcggg cagggcgcgg ttgggggtat ggtgtcgtcg aagcctagag aggtaccgga
     7501 ccctcggtcc ggcctggcgc tcgccgcgct gcggcccagc gaatacacgg cggcgctgat
     7561 ccaggtgctg caggccaagc ggacgtgcgt gcagggcgcg cgcgtgctcg agatcggctc
     7621 gggcagcggg gtcgtgctgg ccgccctcgg tgcgctcggt gccgcttccc tgtgcggcat
     7681 cgacatcgag gaagacgccg tcacctcggg catgctgctg ctcgacgaac tcggccacgg
     7741 caaggtcgcg gagttccatc agggcgacat gtggctgccg gtgggcga
//
LOCUS       DASWGA010000805         5527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2496015, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000805 DASWGA010000000
VERSION     DASWGA010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5527
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2496015"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..647
                     /locus_tag="VF991_18820"
     CDS             <1..647
                     /locus_tag="VF991_18820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558552.1"
                     /translation="SVAGALLGLPAAERLAAGQIVILQRREPRIFYPNREAARDDLYD
                     VEPGDICPRTQRVNRMGGLRGFGREMWRQIALRPGTQPEPRVVTVPLQQFTAAQLHAM
                     IAEAALVVPSFGYRSTMLPIFDEDGARLALSAEEGGTAVGEDCRLLLSDGTSPPNLFG
                     IGLGTGYRLPASMGGEPNFNGQANSLWLYQNDIGAVIYRAIHELLRQPAAAIAA"
     gene            808..1938
                     /locus_tag="VF991_18825"
     CDS             808..1938
                     /locus_tag="VF991_18825"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX9558553.1"
                     /translation="MTERDRFIPPERRHVPTDRARLAGVDVLRGYAAAAVMLHHHGDY
                     YDVLYRGRTPFTFDLSPGHFGVELFFIISGFVILMTSERKNTVLEFALSRATRLMPAF
                     LAALVLATALLILWPMPPLDTPTLRQFLANLTMAPSLFGEAEIDPPYWTLTYELVFYA
                     FMALILRFGLLRSIEWFGLLGVAVGCVFLTTIDVPLHRRSAIMLMVGYSNFFLIGICL
                     YRIHGRAARPVTYLALGCAIAVTALGGGERAFYAPGYLYLPLTAAFAIVVWFAASKHG
                     KWLASPPLVFLGRISYPLYLVHVVLGYSIIRFGVEQGWSTLGGVIAAAIASVVVATLL
                     HYLVEVPGERWSRTLFMRKKPLTPAILTPLPEPVEQRRPPCP"
     gene            complement(1960..2379)
                     /locus_tag="VF991_18830"
     CDS             complement(1960..2379)
                     /locus_tag="VF991_18830"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEX9558554.1"
                     /translation="MPLSSRHEITVEWGDCDPAGIVYYPSYFRWCDEATYRLFLKAGM
                     RRDDISSGQWKEGTPLVAAECSFRRASQTGEKLVIESHVSRFGRSSFTISHVFRDASG
                     EVAAEGTETRIWARKDGDARSLKSVPIPEDVKHRLGG"
     gene            complement(2366..3883)
                     /locus_tag="VF991_18835"
     CDS             complement(2366..3883)
                     /locus_tag="VF991_18835"
                     /inference="COORDINATES: protein motif:HMM:NF006179.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate oxidoreductase subunit beta
                     family protein"
                     /protein_id="HEX9558555.1"
                     /translation="MKPVTILVGALGGDGGGVLCDWIVAAAQSQGLGVQATQIPGVAQ
                     RTGATTYYLEVMPSPGAGAPVLALNPAIGEVDVALATELLEAGRMIFNGFVTPDRTTL
                     IASTHRVLAIGERTAMGDGSFDVGRLLRAVKERSRQQILFDMDQAAEESGGVINAVLL
                     GALAGSGRLPIGDVAFEAAIRHAGKSVDTNLAAFAFGRGHARGELDQAVREHRKRQAA
                     ARDVEDLIEQARQSYPASSLDMVEEGIRRLAGYQDRRYVALYLHRLDRVKALASPELL
                     RDTARHLAVRMSFEDVIRVAQAKVSAERFARVRAEVRAKPGEPLEITEHFKPGIEEIA
                     AILPPAMARRLIAWAERPDRRGRPRLGRVYFSMHVRTTTILGFARLRLLAGLRWWRPH
                     TWRYAEEQAEIERWLQQIRAAAPLSIDLAREIAECARLIKGYGDTHKRGLANYRRIAD
                     QVIAPALAGKMAPRAAADAVANARVAALADPEGDTLSKTLAAIAVSSATLRHAAE"
     gene            complement(3936..>5527)
                     /locus_tag="VF991_18840"
     CDS             complement(3936..>5527)
                     /locus_tag="VF991_18840"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9558556.1"
                     /translation="SEATNTPVMMELRIRACHVTGEFLAKDNKPPAISRNQRLANPAA
                     HNYDRISHPPSTYAHEKIKVEVRQPAAQRFIVDHGLNELLPGERADLGIIVQGGITNV
                     LLRGLDRLEIDGRIPTLVLNVTHPLVPDQIADFCKGKRAVLVVEEGAPDYIEQAIHAI
                     LRKRDIDTRLYGKDVLPMAGEYTAEAVTDGLLKFFAQSANDIDLSRPRERFEAARAGR
                     AEAQRLLGGSLPLRPPGFCVGCPERPVFSAIKLLEREFGKVHISSDIGCHSFATLAPF
                     NLGNSILGFGMSLAAAGAVAPVMEKRTLSVMGDGGFWHNGLLSGVASSMFNRGDRVLV
                     IMQNGYTSATGAQFIPNTAGNRRDGETTSDIAATLKAMGVKWLRTIRTYNVGTMLKTL
                     REAMSTDDKGLKVIVADGECQLARQRRIRPEIAARLKRGERVVRTRFGVDDEVCTGDH
                     SCIRLSGCPSLVVKPNPDPLRSDPVAHVNNGCVGCGLCGEVADAAVLCPSFYKADIVQ
                     NATWWDRLKWRARSAVIGAMA"
BASE COUNT          856 a         1842 c         1857 g          972 t
ORIGIN      
        1 attcggtggc cggggcgttg ctcggactgc cggcggccga gcggctggcg gccgggcaga
       61 tcgtcatcct ccagcgccgc gagccgcgca tcttctatcc caaccgcgag gcggctcgcg
      121 acgacctcta cgacgtcgag ccgggcgaca tctgcccgcg cacccaaagg gtcaaccgca
      181 tgggcggcct gcgcggtttc ggtcgcgaga tgtggcgcca gatcgcgctt cgtcccggga
      241 cacagcccga gccgcgcgtc gtcaccgtgc ccctgcagca gttcaccgcc gcccagctgc
      301 acgcgatgat cgcggaagcg gcgctggtcg tgccctcttt cggctatcgc tcgacaatgc
      361 tgccgatctt cgatgaggat ggcgcgcggc tggcgctcag cgccgaggag ggcggcacgg
      421 ccgtgggcga ggactgccgc ctgctgctca gcgacggaac gagcccgccc aacctgttcg
      481 gcatcggcct cggcaccggc tacaggctgc ccgccagcat gggcggtgag cccaatttca
      541 acggccaggc caacagcctg tggctctatc agaacgatat cggcgcagtg atctatcgtg
      601 ccatccacga gctcctgcgc cagcccgcgg ccgccatcgc cgcctagcca tctttccctt
      661 cacgtccgcg gcgaccggca agacatgact gccggttgca agggctacgg ccgggtcgag
      721 ccttggtcac gagctggcca ccgcagatcc aggcaaacga ggctatggct tggtccatcg
      781 cgatgttttg atgaagctcg cgatgttttg acggaacgcg accgctttat cccgccggag
      841 agaagacacg tgccaacaga tcgagcacgc cttgccggcg tcgatgtgct tcggggttat
      901 gctgccgccg cagtgatgtt gcaccatcat ggagactact acgacgtgct ctatcgagga
      961 cggacgccgt tcaccttcga cctgtcgcca ggtcattttg gcgtcgagct gtttttcatc
     1021 atcagcggct tcgtcatcct gatgacgagc gagcgcaaga acacggtcct cgaattcgcc
     1081 ctctcgcgcg ccacccggct gatgccggcg ttcctcgccg cgctggtcct ggcgaccgcg
     1141 cttctgatcc tgtggccgat gccgccgctg gataccccga cgcttcggca attcctcgcg
     1201 aatctcacca tggcgcccag cttgttcggc gaggccgaga tcgacccgcc ctattggacg
     1261 ttgacctacg aactggtctt ctatgcgttc atggcgctga tcctgcgctt cggtctgcta
     1321 cgctcgatcg aatggttcgg cctcctggga gtcgcagtcg gctgcgtgtt cttgacgacg
     1381 attgatgtgc cgctccatcg tcgcagcgcg atcatgctga tggtcggcta cagcaacttc
     1441 ttcctgatcg ggatctgcct ctatcgcatc catgggcggg cggcccggcc ggttacctac
     1501 ctcgcgctcg gttgcgccat tgcggtaacc gcgctcggcg gcggcgagcg tgcattctac
     1561 gcacctggct acctctattt gccgctgact gcggcgtttg ccatcgtcgt ctggtttgcg
     1621 gcaagcaagc atggcaagtg gctcgcctcg ccgccgttgg tctttctcgg acggatatcc
     1681 tatccgctct atctcgttca cgtcgtgttg ggatactcga tcattcgctt tggcgtggag
     1741 caaggctgga gcacgctcgg cggcgtcatc gcggccgcga tcgcctccgt agtcgtggcg
     1801 accctgctgc actatctcgt ggaagttccc ggtgagcggt ggtcacggac cctgttcatg
     1861 cggaagaaac cgctgacgcc cgcgattttg actccgctgc cggagcccgt agagcaacgc
     1921 aggccacctt gtccatgagc ggcgccctgg cttgctcgcc tagccgccca gcctgtgttt
     1981 cacgtcctcg gggatcggca ccgacttcag cgagcgcgca tcaccgtctt tgcgtgccca
     2041 aatgcgcgtc tccgtgccct ccgccgcgac ctcgcccgag gcgtcgcgga aaacgtggct
     2101 gatggtgaag gagctgcggc caaatcgcga gacgtggctt tcgatcacca gcttctcgcc
     2161 ggtctgcgag gcacggcgga aggaacattc ggcggcgacc agcggcgtgc cctccttcca
     2221 ttggccgctg ctgatgtcgt cacgacgcat gccggccttc aggaacagcc gataggtcgc
     2281 ctcgtcgcac cagcggaaat aggacgggta gtagacgatg ccggccggat cgcagtcgcc
     2341 ccactcgacg gtgatttcgt gacgactact cagcggcatg acgcagcgtg gcagaggaca
     2401 ccgcgattgc cgccagcgtt ttggacagcg tatcgccttc cggatcggca agtgcggcca
     2461 cccgcgcatt ggcgaccgcg tcggccgccg cgcgcggtgc cattttgccg gcgagcgccg
     2521 gcgcgatcac ctggtcggcg atgcggcgat agttggcgag gccacgcttg tgggtgtcgc
     2581 catagccctt gatcaggcgc gcgcactcgg cgatctcgcg ggcgagatcg atgctgagcg
     2641 gcgcggcggc gcggatctgc tgcagccagc gctcgatctc ggcctgctcc tcggcatagc
     2701 gccaggtgtg cggccgccac cagcgcaggc ccgccagcag gcgcaagcgg gcaaagccca
     2761 ggatcgtggt ggtgcgcaca tgcatggaga aatagaccct gcccaggcgg ggcctgccgc
     2821 gccgatccgg gcgctcggcc caggcgatga ggcgccgcgc catcgccggc ggcaggatgg
     2881 cggcaatttc ctcgatgccg ggcttgaaat gttcggtgat ctccagcggc tcgccgggct
     2941 tggcgcgcac ctcggcgcgc acgcgggcga agcgctccgc cgagaccttg gcttgggcga
     3001 cccggatcac gtcctcgaac gacatgcgca ccgcgagatg gcgcgcggtg tcgcgcaaca
     3061 gctcgggcga ggccagcgcc ttcacgcgat cgagccgatg aagatagagc gcgacgtagc
     3121 ggcgatcctg gtagccggcg aggcggcgaa tgccctcctc caccatgtcg aggctgctgg
     3181 cgggatacga ctggcgcgcc tgctcgatga gatcctcgac gtcgcgcgcc gccgcctggc
     3241 gcttgcgatg ctcgcgcacc gcctggtcga gctcgccgcg ggcgtggccc cggccgaagg
     3301 cgaaggccgc aagattggtg tcgaccgatt tgccggcgtg acggatcgcg gcctcgaagg
     3361 cgacatcgcc aatcggcagc cggcccgaac cggcaagcgc gcccagcagc acggcgttga
     3421 tgacgccgcc cgattcctcg gcggcctgat ccatgtcgaa caggatctgt tgcctgctgc
     3481 gctccttgac cgcacgcaac agccggccga cgtcgaagct gccgtcgccc atcgccgtgc
     3541 gctcgccgat agccagcacg cggtgggtcg aggcgatcag cgtcgtgcga tcgggcgtga
     3601 cgaagccgtt gaagatcatg cggccggctt ccaagagctc ggtcgccagc gccacgtcga
     3661 cttcaccgat ggccggattg agcgccagga ccggagcgcc cgcgcccggc gacggcatga
     3721 cctcgagata gtaagtcgtg gccccggtgc gctgggcgac ccccgggatt tgcgtcgcct
     3781 gcacgcccag tccctggctt tgcgcggcgg cgacgatcca gtcgcacagc acgccgccac
     3841 cgtcgccgcc cagggcaccg accaggatgg tgacgggttt cactttatgg ctctcggcga
     3901 aggccggttg ttcacgcacc ctgtcatatt gctgatcacg ccatcgcccc gatgacagcc
     3961 gaccgggcac gccatttcag ccggtcccac cacgtcgcgt tctgcacaat atcggccttg
     4021 taaaaggacg ggcagagcac ggcggcatcg gcgacctcgc cgcacagccc gcagccgacg
     4081 cagccgttgt tgacatgcgc caccggatcg gagcgcagcg gatcggggtt gggcttcacc
     4141 accagcgacg ggcagcccga cagccggatg caggaatgat cgccggtgca gacctcgtcg
     4201 tcgacgccga aacgggtgcg cacgacccgc tcgccgcgct tgagccgggc ggcgatctcg
     4261 ggccggatgc ggcgctggcg ggcgagctgg cattcgccgt cggcgacgat caccttgagg
     4321 cccttgtcgt cggtgctcat cgcctcgcgc agggttttga gcatggtgcc gacgttgtag
     4381 gtgcggatgg tgcgcagcca tttcacgccc atggctttca gcgtggcggc gatatcggag
     4441 gtggtctcgc cgtcgcgccg gttgccggcg gtgttgggga tgaactgcgc gccggtggcc
     4501 gaggtgtagc cgttctgcat gatcaccagc acgcggtcgc cgcggttgaa catcgaagag
     4561 gcgacgccgc ttaaaaggcc gttatgccag aagccgccgt cgcccatcac cgagagggtg
     4621 cgcttctcca tcaccggcgc caccgcgccg gccgcggcga gcgacatgcc gaagcccagg
     4681 atcgagttgc cgagattgaa cggcgccagg gtggcgaagg agtggcagcc gatgtcgctc
     4741 gagatgtgaa ccttgccgaa ttcacgctcc aaaagcttga tcgccgagaa caccggccgt
     4801 tcgggacagc cgacgcagaa gccgggcggc cgcagcggca gtgagccgcc gagcaggcgc
     4861 tgggcctcgg cgcggccggc gcgcgccgcc tcgaagcgct cgcgcggccg ggaaaggtcg
     4921 atgtcgttgg ccgactgggc gaagaacttc agcaggccgt cggtcaccgc ctcggcggtg
     4981 tattcgcccg ccatcggcag cacgtccttg ccgtaaagcc tggtatcgat gtcgcgcttg
     5041 cgcaggatgg cgtggatcgc ctgctcgata tagtcgggcg cgccctcctc gaccaccagc
     5101 acggcgcgct tgcccttgca gaaatcggcg atctggtccg gtaccagcgg atgggtgacg
     5161 ttcaggacca gggtcgggat cctgccgtcg atctcgagcc ggtcgaggcc gcgcagcagg
     5221 acgttggtga tgccgccctg cacgatgatg ccgaggtcgg cacgttcgcc agggagcaat
     5281 tcgttcaggc catggtcgac gataaagcgc tgggcggcag gctggcgcac ttcgaccttg
     5341 atcttctcgt gcgcgtaggt cgaaggcggg tgcgagatgc ggtcgtagtt gtgcgccgcc
     5401 gggttggcca ggcgctggtt gcgcgagatc gcgggcggct tgttgtcctt ggctaaaaat
     5461 tcgccggtga cgtggcaggc gcggatgcgc agttccatca tcaccggcgt gttggttgcc
     5521 tcggaaa
//
LOCUS       DASWGA010000806         7114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2375809, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000806 DASWGA010000000
VERSION     DASWGA010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7114
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2375809"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..850)
                     /locus_tag="VF991_18845"
     CDS             complement(77..850)
                     /locus_tag="VF991_18845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558557.1"
                     /translation="MPSASSIEVRHLRKVYGEIVAVDDLTFSVPPGKVLGLLGGNGAG
                     KTTTIAMLLGLLEPTAGEISVLGIDMLRRRYAALPRMNFSSPYVDLPHRLTVRQNLLF
                     YGRLYGVRNLGRRIGEIAEHMQIGPFLDRQAGKLSAGQKTRVALAKALINRPDVLLLD
                     EPTASLDPDTADWVRGYLKDYQHETAATILLASHNMSEVERLCDDVILLQAGRVFERG
                     SPRDLIERFGRDDMEEVFLDMARGRGRGLDALSNKEAAS"
     gene            complement(858..2054)
                     /locus_tag="VF991_18850"
     CDS             complement(858..2054)
                     /locus_tag="VF991_18850"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF004770.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX9558558.1"
                     /translation="MQTASRFQAPGLGASLSRPIAELRDTHITEVAMSVFGDPEVIPL
                     WFGEGDLVTPDFVREAAATGLQAGETFYTWQRGIPELRAALSAYTERLYGIDCPVDRI
                     SVTTGGMQAILLSCQLLLDPGDNIVIVSPIWPNITSATRLVRGEPKYVALDRKPDGAW
                     KLDLQKVFDSVDARTRAIFVNSPGNPTGWTMSADEQRALLEFARKHGIWIMADEVYAR
                     LIYTRPVAPSFLELAGPDDPLLVLNSFSKPWAMTGWRIGWLTHPARLGEQFAKLVQIN
                     TSGVPHFLQRGAIAALEKGDGFIGAMVERCRAGGELVFQRLSAHPRITIARPEAAFYA
                     FFAIDGVSDTLAFCKSLAKDYKVGLAPGEAFGPGGQGNVRLCFASGAERLSRGLDRIE
                     AAIKAL"
     gene            2178..2465
                     /gene="bamE"
                     /locus_tag="VF991_18855"
     CDS             2178..2465
                     /gene="bamE"
                     /locus_tag="VF991_18855"
                     /inference="COORDINATES: protein motif:HMM:NF016258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEX9558559.1"
                     /translation="MKRLALALSMASLAAGCAVPARNMEQIHAGMTHDQVQSIMGQPQ
                     AIAYSAGKQCAYYALLKDFWSRVPWSVSESYYVCYDDGKVETFGKVDAPTS"
     gene            2511..3461
                     /locus_tag="VF991_18860"
     CDS             2511..3461
                     /locus_tag="VF991_18860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558560.1"
                     /translation="MADEQQKLMLPEWLAEHRQGTYIDGRRFDEIGFLQCKLILKPDR
                     FTSAHVFKEFATLVQRAAEKTGIGYRHTPKLQQRPEVREVLFLDTGAFHLYNNAFIVR
                     RRIAYEDGFPIGDPEIVFKYRSADMMVAQGMDVRPNISGKYKIKFKLEVMPLKEHIGG
                     MRRLLSHNVEFGLSQAPEADRMAMASLGHMSLPELQDLFPPLKTISCDGPEDVSLVNQ
                     CIVEELLQDICDLDFGHHTAATANLGLWRSRGDHHPFVGEFAYQLRFDGPTAIGHKSL
                     QACERFFVELQQTAADWLALTTTKTGAVYRLKGNPPQAHE"
     gene            3458..4039
                     /locus_tag="VF991_18865"
     CDS             3458..4039
                     /locus_tag="VF991_18865"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX9558561.1"
                     /translation="MSAPSSSSASPAPSLGKIFWIFLVMGATSLGGGVVGYLRTGLVV
                     RQRWLDDVTFVELLSISQTLPGLNATNMAILVGDRLRGWPGALLAMLGMCLPGAALMT
                     AAAFAYSVGGDDPWSKAFLHGIAAGAVGLIVVVMVQLGSRVLKGLADYVFVLATAAAV
                     AGFGVQVPYALLAAGALAIWWHRPRRRDGGDAK"
     gene            4036..4578
                     /locus_tag="VF991_18870"
     CDS             4036..4578
                     /locus_tag="VF991_18870"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX9558562.1"
                     /translation="MKQLGDIAGVFAYLSLLTVGGGMAAFPELKTLTVDVYHWVTFPE
                     LLHFYSLGQLAPGPNMMMVASIGAVVAGLPGAAVALVAFFLPTGLLTFAIGRLWSHLA
                     TWRWRPAVQLGLGSVSVGLVLAGAIIMGRGALTDLLYVALAVVVFFLLLRTKINPAYP
                     IVASGLIGLLAHWLEYTPAS"
     gene            complement(4575..5117)
                     /locus_tag="VF991_18875"
     CDS             complement(4575..5117)
                     /locus_tag="VF991_18875"
                     /inference="COORDINATES: protein motif:HMM:NF014543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558563.1"
                     /translation="MIASALLAAGPVFAQEIALTRGKPQCPPGEPDSLQISWTAPCDS
                     GTWLFEPGVGCRMWDWHPEPEDSVVWRGACRAGLPDGKGEAQWFEHGRPIDRFIGMYV
                     NGKREGEGHYQWNDTVRFDGFYANDLPQGYGVVEIEGEIVAGDWNKGCLKAAGKVVAI
                     GVQRASCGPVSGKRGEVVKR"
     gene            5243..5815
                     /locus_tag="VF991_18880"
     CDS             5243..5815
                     /locus_tag="VF991_18880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HEX9558564.1"
                     /translation="MSILILGLVIFLGIHTLTTLRPARAAVIGRLGEGPYKGLYSFVS
                     AVGLVLIVWGFGRYRSAGYIAVWDPPFTIFHPIALMLLWFAFVALASAYAPPSKIKAT
                     LRHPMLVAVKVWALSHLLVNGDLGSMLLFGALLAWAIYDRIAVKRRGDQGAPPVARFG
                     RNDAIVIAIGTVAYFAILWLHESLIGVAAA"
     gene            5951..6268
                     /locus_tag="VF991_18885"
     CDS             5951..6268
                     /locus_tag="VF991_18885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEX9558565.1"
                     /translation="MMKRPLIALVLVLAAAATQAQARSPIGGATMPRDPLQVDPLGPR
                     SDPTPTVGEAVARVQIEKSGYTSVRGLSRSADGTWRGKARNAGNAPVTVALDGQGKVV
                     ETR"
     gene            6378..7013
                     /locus_tag="VF991_18890"
     CDS             6378..7013
                     /locus_tag="VF991_18890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX9558566.1"
                     /translation="MTDDYQRRSYGEIPVGTGDKPGIVVVDFQLGFTDPQYPLGGAPL
                     VMRAVENTAKLLKVARRLGVPVAVCNTAYMNEREMPYWKITAVKETFLHSHPSTALDP
                     RIYQPDYDLKVTKKGPSIFFETGVANYFMKERADTMIVTGCNTSGCIRGSALDSFSHR
                     FRTLVPEDCVGDIEEQPHRDNLRDIGRRYVDVVDLAFCIDYLERWGKRNAA"
BASE COUNT         1162 a         2409 c         2306 g         1237 t
ORIGIN      
        1 accagccgca tgatcgaact gcgccagatg tggatgtggc gcatcaccag ggcatagatg
       61 cgttcggccg agccgttcac gacgccgcct ccttgttgct gagcgcgtcg agcccgcggc
      121 cgcggccgcg cgccatgtcc aaaaacactt cctccatgtc gtcgcggccg aagcgctcga
      181 tcaggtcgcg cggcgaaccg cgctcgaaga cgcggccggc ctgcagcagg atcacgtcgt
      241 cgcacagccg ctcgacctcg ctcatattgt gcgaggcgag caggatcgtg gcggcggtct
      301 cgtgctggta atccttgagg tagccgcgca cccagtcggc ggtatcgggg tcgagcgagg
      361 cggtgggctc gtcgagcagc agcacgtcag ggcggttgat cagcgccttg gccagcgcca
      421 cgcgcgtctt ttggccggct gaaagcttgc ctgcctggcg atcgagaaaa ggcccgatct
      481 gcatgtgctc ggcgatctcg ccgatgcgcc ggccgaggtt gcgcacgccg tagaggcgac
      541 cgtagaacaa caggttctgg cgcaccgtca ggcgatgcgg caggtcgaca taaggcgacg
      601 agaagttcat gcgcggcagg gcggcgtagc ggcggcgcag catgtcgatg cccagcacgc
      661 tgatctcgcc ggccgtcggc tcgagcagcc ccagcagcat ggcgatggtc gtggtcttgc
      721 cggcgccatt gccgcccagc agcccgagca ccttgccggg cggcacggag aacgtcagat
      781 cgtcgaccgc gacgatctcg ccgtacacct tgcgcaggtg ccggacctcg atggaagagg
      841 cgctgggcat ggccgcatca tagcgccttg atcgcggctt cgatgcggtc gaggccccgg
      901 ctcagtcgtt ctgcacccga tgcgaagcaa agtcgcacat tgccctgccc gcccggtcca
      961 aaggcctcgc ccggcgccag gccgaccttg tagtccttgg ccaggctctt gcagaaggcc
     1021 agcgtatcgc tgacgccgtc gatggcaaag aaggcgtaga aagccgcctc cggccgcgcg
     1081 atggtgatgc gcggatgcgc cgacaggcgc tggaacacca gctcgccgcc ggcccggcag
     1141 cgctcgacca ttgcgccgat gaagccgtcg cccttttcga gcgccgcgat cgcgccgcgc
     1201 tgcaggaagt gcggcacacc cgaagtgttg atctgcacca gcttggcgaa ctgctcgccc
     1261 agccgcgcgg gatgggtcag ccagccgatg cgccagcccg tcatggccca cggcttggag
     1321 aacgagttga gcacgagcag cggatcgtcc ggtccggcca actcgaggaa cgacggcgcc
     1381 accggccgcg tatagatcag gcgcgcatag acctcgtcgg ccatgatcca gatgccgtgc
     1441 ttgcgggcga attcgagcaa tgcccgctgc tcgtcggcgc tcatcgtcca gcccgtggga
     1501 ttgcccggcg aattgacgaa gatcgcgcgc gtgcgggcat cgactgaatc gaacaccttc
     1561 tgcaggtcga gcttccaggc gccgtccggt ttgcggtcga gcgccacgta tttcggctcg
     1621 ccgcgcacca gcctggtggc cgaggtgatg ttgggccaga tcggcgagac gatgacgatg
     1681 ttgtcgccgg gatcgagcag gagctggcag ctcagcagga tcgcctgcat gccgccggtg
     1741 gtcaccgaaa tgcggtcgac gggacagtcg atgccataaa gccgttcggt gtaggcgctg
     1801 agcgcggcgc gcagctcggg aatgccgcgc tgccaggtat agaaggtctc gccggcctgc
     1861 aggccagtgg ctgccgcctc gcgcacgaag tcgggcgtca ccaggtcgcc ctcgccgaac
     1921 cacagcggga tcacctcggg atcgccgaac acgctcatcg ccacttccgt gatgtgcgtg
     1981 tcgcgaagct cggcgatcgg gcggctgagc gacgcgccaa ggccgggcgc ctggaaacgg
     2041 gaagcggtct gcatgcctgg gacctagcgc atcggcgctc gtttcgccag ccgaaggcct
     2101 gcccgacaat tgttggcggc gaggccaagg ctaacttatc gctcgcgagc gtgcgcaatg
     2161 ttgggcagag tcgaccgatg aagcgccttg cccttgcact atcgatggcc agccttgccg
     2221 caggctgcgc cgtgcccgcc cggaacatgg aacagatcca tgccggcatg acccacgatc
     2281 aggtccagtc gatcatgggc cagccgcagg ccatcgccta ctcggcgggc aagcaatgcg
     2341 cctactacgc gctgctcaag gatttctgga gccgcgtgcc gtggagcgtg tcggagagct
     2401 attatgtttg ttacgacgac ggcaaagtcg aaaccttcgg caaggtcgac gcaccgacgt
     2461 cgtgatgaca ggacggtgaa cgcacgatac ggtgcggccg gggaggacga atggcggacg
     2521 aacagcagaa attgatgctg ccggagtggc tcgccgagca ccggcaggga acctacatcg
     2581 acggcaggcg cttcgacgag atcggcttcc tgcagtgcaa attgattctc aagcccgacc
     2641 gcttcacctc ggcccacgtc ttcaaggaat tcgccaccct cgtccaacgc gccgccgaga
     2701 agaccggcat cggctatcgt cacacgccga aactgcagca gcggcccgag gtgcgcgagg
     2761 tgctgttcct cgataccggc gccttccacc tctacaacaa cgccttcatc gtgcgccgcc
     2821 gtatcgccta tgaagacggt ttcccgatcg gcgatcccga gatcgtcttc aagtaccgca
     2881 gcgccgacat gatggtcgcc cagggaatgg acgtccggcc gaacatcagc ggcaagtata
     2941 agatcaagtt caagctcgag gtcatgccgc tcaaggagca tatcggcggt atgcgacgtc
     3001 tgctgtcgca caatgtcgag ttcggcctga gccaggcgcc cgaggcggac cgcatggcca
     3061 tggcctcgct cggtcacatg agcctgccgg agctgcagga cctctttccg ccgctcaaga
     3121 cgatctcgtg cgatgggccc gaggacgtat cgctggtcaa ccaatgcatc gtcgaggagc
     3181 tgctgcagga tatctgcgat ctcgatttcg gtcaccacac ggcggccacc gccaatctcg
     3241 gcctgtggcg ctcgcgcggc gaccatcatc ccttcgtcgg cgagttcgcc taccagctgc
     3301 gcttcgatgg ccccaccgcc atcggccaca agtcgctgca ggcctgcgag cgcttcttcg
     3361 tcgagctgca gcagacggcc gccgactggc tggcgctcac caccaccaag accggcgcgg
     3421 tctaccgcct gaagggcaat cctccgcaag cccacgaatg agcgcgcctt cttcttcatc
     3481 ggcatcgccc gcgccgtcgc tgggcaagat cttctggata ttcctggtga tgggcgcgac
     3541 cagcctgggc ggcggcgtgg tcggctacct gcgcaccggc ctggtcgtgc gccagcgctg
     3601 gctggacgac gtcaccttcg tcgagctgct gtcgatcagc cagaccctgc ccggcctcaa
     3661 cgccaccaac atggcgatcc tggtcggcga ccgcctgcgc ggctggcctg gcgcactgct
     3721 ggcgatgctc ggcatgtgcc tgcccggcgc cgcgctgatg accgcggcgg ccttcgccta
     3781 cagcgtcggc ggcgacgatc cctggtcgaa ggcgtttttg cacggcatcg ccgccggcgc
     3841 cgtcgggctg atcgtggtgg tcatggtgca gctcggttct agggtgctga agggcctcgc
     3901 cgactacgtc ttcgtcctgg ccaccgccgc cgccgtggcg ggctttggcg tgcaggtgcc
     3961 ctatgccttg ctggcggccg gcgcgctcgc catctggtgg caccggccgc gccggcgcga
     4021 cggcggcgac gccaaatgaa gcagctgggc gatatcgcgg gcgtcttcgc ctatctctcg
     4081 ctgctgaccg tcggcggcgg catggcggct ttccccgagc tcaagacgct gaccgtcgac
     4141 gtctatcatt gggtgacgtt tcccgagctg ctgcacttct acagcctggg ccagctcgcc
     4201 cccggcccca acatgatgat ggtggcctcg atcggcgccg tggtcgcggg cttgcccggc
     4261 gcggcggtgg ccctggtcgc cttcttcctg ccgaccggtc tcttgacctt cgccatcggt
     4321 cggctgtgga gccatctcgc cacttggcgc tggcggccgg cggtccagct cgggctcggc
     4381 tcggtttcgg tcggtctcgt gctcgccggc gccatcatca tgggccgcgg cgcactcacc
     4441 gacctgctct acgttgcgct ggccgtcgtc gtgttctttc tgttgctacg caccaagatc
     4501 aatccggcct atccgatcgt ggcgtcgggc ctgatcgggc ttttggcgca ttggcttgag
     4561 tacaccccgg ccagttagcg tttcacgacc tctccgcgct tgccgctgac cgggccgcac
     4621 gaggcgcgct gcacgccgat cgccacgacc ttgccggcgg ccttgaggca gcccttgttc
     4681 cagtcgccgg ccacgatctc gccctcgatc tcaaccacgc cgtagccctg cggcaggtcg
     4741 ttggcataaa aaccgtcgaa gcggacagtg tcgttccact ggtagtgtcc ttcgccttcg
     4801 cgcttgccgt tgacgtacat gccgatgaaa cggtcgatcg gacggccatg ctcgaaccat
     4861 tgcgcctcgc ccttgccgtc cggcaggcca gcgcggcagg cgccgcgcca gacgacgctg
     4921 tcttccggct cgggatgcca atcccacatg cggcagccca cgccgggctc gaacagccag
     4981 gtgccgctat cgcacggcgc cgtccagctg atctgcagcg aatcgggctc gccgggcggg
     5041 cactgcggct tgccgcgcgt cagcgcaatc tcctgcgcaa acaccggccc tgccgccagc
     5101 agcgctgagg caatcatgac aggtataagt cgcattctac gcccccgaat ccacctcggg
     5161 tggatatggg gacaacgcct ggactttgcc aacggttgcc ctgttttcgc ccgaaatcgt
     5221 gccgtgctaa ccttgggaca caatgagcat cctgatccta ggcctagtca tcttcctcgg
     5281 cattcacact ttgaccacgc ttcgcccggc gcgcgcggcg gtgatcggcc gactgggcga
     5341 aggaccctac aaagggcttt actcgtttgt atcagcggtc ggcctggtgt tgatcgtctg
     5401 gggtttcggc cgctatcgca gcgccggcta tatcgcggtc tgggatccgc ccttcaccat
     5461 cttccatccc attgcgctga tgttgctgtg gtttgccttc gtggcgctgg cttcggccta
     5521 tgcgccgccc agcaagatca aggcgacgct gcgccatccc atgctggtgg cggtgaaggt
     5581 ctgggcgctc tcccacctgc tggtgaacgg cgatctcggc tcgatgctgc tgttcggcgc
     5641 cctgctcgcc tgggcgatct acgatcgcat tgccgtgaag cggcgcggcg accaaggcgc
     5701 gccgccggtc gcgcggttcg gccgcaacga cgcgatcgtg atcgcgatcg gaacggtcgc
     5761 ctatttcgcc atcctgtggc tgcacgaatc gctgatcggc gtcgctgccg cgtaaattct
     5821 cgacagtcgc agcacggttg atgcggcggt gatcattcgc gccgctgggc gcccctacca
     5881 caaagcggcc gcaatgctgg tcaggatcac gcccgtccgc aaggacgagt cgtaaacaag
     5941 gagtagttga atgatgaagc gtcccctcat tgctttggtt ctggtgctcg cagcggcggc
     6001 cacacaagcc caggcgcgct cgccgatcgg cggcgcgacc atgccgcgcg atcccctgca
     6061 ggtcgatccg ttgggcccgc gcagcgaccc cacgcccacc gtcggcgaag ccgtcgcacg
     6121 cgtgcagatc gagaagagcg gctacaccag cgtgcgcggc ctgtcgcgca gcgccgacgg
     6181 cacctggcgc ggcaaggcgc gcaacgccgg caacgcaccc gtcacggtcg ccctcgacgg
     6241 ccagggcaag gtcgtcgaga cgcgctaggc gctctcggga tcgcccaata gaggcccgcc
     6301 ccgtcgtcga cggggcgggc ttttgcttgc gcccggcgtt gatggtcaaa tggccgcgcc
     6361 agcctgaagg agtgcccatg accgacgact accagcgccg cagctacggc gagatcccgg
     6421 tggggaccgg cgacaagccc ggcatcgtcg tcgtcgattt ccagctcgga ttcaccgatc
     6481 cgcaatatcc gctgggcggc gcgccgctgg tgatgcgcgc ggtcgagaat accgcgaagc
     6541 tcctgaaggt cgcgcggcgg ctcggcgtgc cggtggcggt atgcaacacc gcctacatga
     6601 acgagcgcga gatgccgtac tggaagatca cggcggtcaa ggagaccttc ctgcacagcc
     6661 atcccagcac ggcgctcgat ccgcgcatct accagcccga ttacgatctc aaggtgacca
     6721 agaaaggccc gtcgatcttc ttcgagaccg gcgtcgccaa ctatttcatg aaggaacggg
     6781 ccgacaccat gatcgtgacc ggatgcaaca cctcgggctg catccgcggc agcgcgctcg
     6841 acagtttcag ccatcgcttc cgcactctgg tgccggaaga ctgcgtcggc gacatcgagg
     6901 agcagccgca tcgcgacaat ctgcgcgata tcggccggcg ctatgtcgat gtcgtcgatc
     6961 tggcgttttg catcgactac ctcgagcgct ggggcaagcg caacgccgcc tgagctagcc
     7021 cgcgctggcg cagacatcga cccattacgc ctcgaccagc tcggccaggc gcagtggatt
     7081 gatgcgcaac gcgctgcggg ctgagccggc ggcc
//
LOCUS       DASWGA010000807         3956 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2118207, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000807 DASWGA010000000
VERSION     DASWGA010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3956
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2118207"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..832)
                     /locus_tag="VF991_18895"
     CDS             complement(83..832)
                     /locus_tag="VF991_18895"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9558567.1"
                     /translation="MKKFSSIVITGASSGIGEALALDYADRGVALALTGRDAGRLEAV
                     AAACRAKGATVVADTVDVVDRDKLGAWLTAFDDAHPVDLVIANAGISIDKNNSSLDDF
                     SVIRKTFDVNVGGVLNTVEPLLARLIKRKRGQIAVVASLASFIGLPYSASYNASKAAV
                     RVWGESIRYVLQKDGIGVSVICPGFVVSRMTANAPFPMPFLMTAERASAIIRHGLAHN
                     HARIAFPIGTKAAVWFGQSLPGRWTARLLGA"
     gene            944..1828
                     /locus_tag="VF991_18900"
     CDS             944..1828
                     /locus_tag="VF991_18900"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HEX9558568.1"
                     /translation="MTGYARTQGSDDQRRWVWEARSVNGRNLEIRCRVPQGFDRLENP
                     ARTAVGSRLKRGNVSLTLTIASDRQGKPLRINRALLAELGALVEEVRKGTGAAAPTAD
                     GLLRVRGVIEEDDEAVESEEALAVLDKALTATLEEVLKALAAARAAEGRALAGVIDRH
                     IDEIEALCGRAADRAAAQIGTLKTRFDSQLAELLERAPALSEERFAQEVALLVGKADV
                     REELDRLAAHIAQARTLLADARPDNPVGRKFDFLCQEFNREANTLCSKSADIELTRIG
                     IDLKGAIERLREQVQNVE"
     gene            1818..2468
                     /gene="gmk"
                     /locus_tag="VF991_18905"
     CDS             1818..2468
                     /gene="gmk"
                     /locus_tag="VF991_18905"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEX9558569.1"
                     /translation="MSSNVEAPAIQRRGLMLVLSSPSGAGKTTLSRQLLENDSHIQLS
                     VSCTTRAKRPGEKDGVDYKFIDTPSFRSMIERGEFLEHARVFDHYYGTPRAPVEAALQ
                     GGRDMLFDIDWQGTQQLKEKGREDLVTVFILPPSTRDLEKRLITRAQDSPDIVARRMA
                     KAADEMSHWAEYDYVVINRDIATSLMQIKSILTAERLKRERQQGLESFVKALREGR"
     gene            complement(2443..3246)
                     /locus_tag="VF991_18910"
     CDS             complement(2443..3246)
                     /locus_tag="VF991_18910"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX9558570.1"
                     /translation="MIRSIAFNIYFYSFTFVAAIIGVVLLPIPTPVVLRGLLHYWARG
                     VVWGMRWIGGMKVEIRGRENIPVRGPALLANKHHSESDGIFLAANIPGIAFVAMQELF
                     RYPVIGAILYRLQMIRVDACGGGKEREHLAQFAKRAYDSGRHIAIYPEGNLMAPGERE
                     RYRSGIYYLYRDLGLPVTPVATSLGLLWNRRDWWKKPGRAAIEFLPAIETGLDKQTFM
                     QRLEKTIETASDRLIAEFSGKPFAASQLVLRSQGQSGNDQPATAPRAAL"
     gene            complement(3358..>3956)
                     /gene="rsmA"
                     /locus_tag="VF991_18915"
     CDS             complement(3358..>3956)
                     /gene="rsmA"
                     /locus_tag="VF991_18915"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEX9558571.1"
                     /translation="AITALQDLQDAAPGRLDLLEADALEVDLAGLGSPPRRIVANLPY
                     NVSTALLVRWLHQAGQIADMVLMFQKEVADRLAAMPRSKDYGRLSVLAQHVCIVQRLF
                     DVAPSAFVPPPKVTSSVVRLTPRPVGDRLVDLAILERVTAAAFGQRRKMLRRSLAGLF
                     ADPAAVLTGLGLRPTARAEELGVADFVRLAELLRAEAR"
BASE COUNT          713 a         1262 c         1387 g          594 t
ORIGIN      
        1 tccatctgcg ccagatcttc cgccaggagc tgccggcgcg ctggagcgtg gcggactcgc
       61 cctatatcgc ccgtcgggtc gactaggcgc cgagcaagcg tgcggtccag cgccccggca
      121 gggactggcc gaaccagaca gcggccttgg tgccgatcgg gaaggcgatg cgcgcgtggt
      181 tgtgggcgag gccgtgccgg atgatggcgg aggcgcgctc ggcggtcatc aggaagggca
      241 tggggaaggg cgcgttggcg gtcatgcggc tcaccacgaa gcccggacag atgacgctga
      301 cgccgatgcc gtccttctgc aggacgtagc ggatgctctc gccccacacg cgaacggcgg
      361 ccttgctggc gttgtaggag gccgagtagg gcagtccgat gaagctcgcg agcgaggcga
      421 cgacggcgat ctggccgcgc ttgcgcttta tcagccgtgc cagcagcggc tcgacggtgt
      481 tcagcacgcc gccgacattg acgtcgaacg tcttgcggat caccgagaaa tcgtcgagcg
      541 aggaattgtt cttgtcgatc gagatgccgg cattggcgat cacgagatcg accggatgcg
      601 cgtcgtcgaa ggcggtgagc caggcgccga gcttgtcgcg gtcgacgaca tcgaccgtat
      661 cggccaccac cgtagcgccc ttggcgcgac aggcggcggc gaccgcctcg aggcggcccg
      721 cgtcgcggcc ggtcagcgcc agcgccacgc cacggtcggc atagtcgagc gccagcgcct
      781 cgccaatgcc gctcgacgca ccggtgatga caatgcttga gaactttttc atgggataac
      841 cttcgggcgg atcgcgttgt ctgcgctagg agccgatact agagtgcctc gccgtggcgc
      901 ggccagtggt gtggcaagtg gagtgtcgtt attgattgca agcatgacgg gatacgcccg
      961 gacgcagggg tcggatgacc agcggcgctg ggtctgggaa gcgcgcagcg tcaacggccg
     1021 caacctggaa atccgctgcc gcgtgccgca gggcttcgac cgtctggaga atccggcgcg
     1081 tactgcggtc ggctcccgcc tgaagcgcgg caacgtttcc ttgacgctga ccatcgccag
     1141 cgaccgccag ggcaagccat tgcgcatcaa ccgcgccctc ctcgccgagc tgggcgcgct
     1201 ggtcgaggaa gtgcgcaagg gcaccggcgc ggccgcgccg acggcggatg ggctgctgcg
     1261 cgtgcgcggc gtcatcgagg aggatgacga ggccgttgaa agcgaggaag cgctcgcggt
     1321 actcgacaag gcgctgacgg cgaccctcga ggaggtcctg aaggcgctag ccgccgcacg
     1381 ggcggcggag ggccgggcgc tggctggcgt gatcgatcgc cacatcgacg agatcgaagc
     1441 cctgtgcgga cgggcagccg atcgggcagc cgcccagatc ggcaccttga agacccggtt
     1501 cgacagccag cttgccgagc tgctggagcg cgcgccggcg ctttcggagg agcgctttgc
     1561 ccaggaggtg gcgctgctgg tcggcaaggc cgacgtgcgc gaggaactgg accggctggc
     1621 cgcccacatt gcgcaggcgc ggaccctgct cgccgacgcc cgtcccgaca atccggtggg
     1681 ccgcaagttc gatttcctct gccaggaatt caaccgcgag gccaacacgc tgtgctcgaa
     1741 gtcggccgac atcgagctga cgcggatcgg catcgatttg aagggcgcca tcgagcgcct
     1801 acgggagcaa gtgcagaatg tcgagtaacg tcgaggcgcc ggccatccag cggcgcggcc
     1861 tgatgctggt gctgtcctcg ccgtcgggcg cgggcaagac gaccctgtcg cggcagctcc
     1921 tggaaaacga ttcgcacatc cagctcagcg tctcctgcac gacgcgcgcc aagcggccgg
     1981 gcgagaagga cggggtcgac tacaagttca tcgacacgcc gagcttccgc agcatgatcg
     2041 agcgcggcga atttttggaa catgcccgcg tgttcgatca ctactacggc acgccgcgcg
     2101 cgccggtcga agcagcgctg cagggcggcc gcgacatgct gttcgacatc gactggcagg
     2161 gcacgcagca actcaaggag aagggccgcg aggacctggt gacggtgttc atcctgccgc
     2221 cgtcgacgcg cgacctcgaa aagcggctga tcacgcgcgc ccaggattcg cccgacatcg
     2281 tggcccgccg catggccaag gcggccgacg agatgagcca ttgggcggag tacgactacg
     2341 tcgtcatcaa ccgcgacatc gccaccagcc tgatgcagat caaatccatc ctgacggccg
     2401 agcggctcaa gcgcgaacgc cagcaggggc tcgagagctt cgtcaaagcg ctgcgcgagg
     2461 ggcggtagcc ggctggtcat tgccgctttg accctgcgaa cgcagcacga gctgcgaggc
     2521 cgcaaagggc ttgccggaga attcggcgat cagccggtcg ctcgccgttt cgatcgtctt
     2581 ctccaaccgc tgcatgaagg tctgcttgtc gaggccggtc tcgatcgccg gcaggaactc
     2641 gatggcggcg cggccgggct tcttccacca gtcgcggcgg ttccacaaca ggccgagcga
     2701 agtggcgacc ggcgtcaccg gcaggccgag atcgcggtag agatagtaga tgcccgagcg
     2761 gtagcgctcg cgctcgcccg gcgccatcag attgccctcc ggatagatcg cgatgtggcg
     2821 accgctgtca taggcgcgct tggcgaactg ggcgaggtgc tcgcgctcct tgccgccgcc
     2881 gcaggcgtcg acgcggatca tctgcaggcg atagaggatg gcgccgatca ccggatagcg
     2941 gaacaactcc tgcatggcga cgaaggcgat gccgggaatg ttggccgcca agaagatgcc
     3001 gtcgctctcg ctgtgatgct tgttggcgag cagggcaggg ccgcgaacag gaatgttctc
     3061 gcggccgcgg atctcgacct tcatgccgcc gatccagcgc atgccccaga ccacgccgcg
     3121 ggcccagtaa tgcagcaggc cgcgcaacac caccggcgtc gggatcggca gcaggacgac
     3181 accgatgatc gcggccacaa aggtgaagct gtagaagtag atgttgaagg cgatggagcg
     3241 gatcatgatg ataagtatgt gagcactcac tcattttgtc aataggccac atgaccgagg
     3301 attctcgagg gtggccggcc agttcgccgt ccattcggcc atccttcgaa tggccaatta
     3361 gcgtgcttcg gcccgcaaga gctcagccag acggacgaag tcggccacgc cgagttcttc
     3421 ggcgcgggcc gttggccgca acccaaggcc ggtcaggacc gccgcaggat cggcaaagag
     3481 acccgccagg ctgcggcgca gcatcttgcg gcgctggccg aaggctgccg cggtaactct
     3541 ctccaggatc gccaaatcga ccagccggtc gccgacgggc cgaggcgtca gccgtaccac
     3601 cgaggaggta accttgggcg ggggaacgaa cgccgagggc gccacgtcga acaaccgctg
     3661 cacgatacag acatgctggg cgaggaccga cagccggcca tagtccttgc tgcgcggcat
     3721 ggccgccagg cgatcggcga cctccttctg gaacatcagg accatgtcgg cgatctgccc
     3781 cgcctggtgc agccagcgca ccagcaacgc ggtcgagaca ttgtagggca ggttggcgac
     3841 gatccgacgg ggcggcgagc ccaagcccgc caggtcgacc tcgagcgcgt cggcttcgag
     3901 gaggtcgagg cgacctgggg cggcgtcctg caagtcctgc aaggctgtga tagccc
//
LOCUS       DASWGA010000808         1715 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1747150, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000808 DASWGA010000000
VERSION     DASWGA010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1747150"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..928)
                     /locus_tag="VF991_18920"
     CDS             complement(110..928)
                     /locus_tag="VF991_18920"
                     /inference="COORDINATES: protein motif:HMM:NF024762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HEX9558572.1"
                     /translation="MRLDRLRELCAGDGERLDILEAALVLSVLRSGEARDLTPFRQHV
                     AAMASDLGDLVRRRGPSPDSLAEVVARSYAYRGDSDSYDDLQNADLVRVIERRKGLPV
                     ALSILYLHVARAQGWDADGLAFPAHFLIRVGIEGARHVIDPFHDGTVREAADLRVLLR
                     QVLGPDAELHPQHFDPVTDRDVLLRLENNVRLRLAKREDWTGAALSLERMPAIAPDRP
                     ALLFEAGQLNARLDKRRAAIAAFERFLDLEGDGGDPDLRQRASALLQELRHGLN"
     gene            complement(928..1293)
                     /locus_tag="VF991_18925"
     CDS             complement(928..1293)
                     /locus_tag="VF991_18925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007008097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEX9558573.1"
                     /translation="MTTEARQAAYRLGHVAEWRAVWRLRLAGYSVLARRYKTKLGEID
                     IVVRRGGVLAFVEVKARADVPTATDALGGRQFGRVARAASLFLARHPRYAAHSVRFDA
                     VLVGSLWPRHLPDVWRPPE"
     gene            complement(1290..>1715)
                     /locus_tag="VF991_18930"
     CDS             complement(1290..>1715)
                     /locus_tag="VF991_18930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEX9558574.1"
                     /translation="KEVERRRAISAAASVPSTLVFFEAPHRLAASLVDLADLLGPRPA
                     AIARELTKLFEEVRRAPLTELADHYARHPEVKGEIAIVIGPPDEAVAPAAAKLDKALL
                     TAMAGASLKDAAAEVAARYGLKRRDVYARALELKREAVS"
BASE COUNT          280 a          598 c          608 g          229 t
ORIGIN      
        1 agcacgaagg tcgaatcgcc gtcgatgtcg atggtcgaca catggtccat ctggatggcg
       61 acgttgagct tcatgggcag gtcctggggc aaatcctgga gcgggacggt cagttaagcc
      121 cgtggcgcaa ttcctgcaac agcgccgacg cccgctggcg caggtcggga tcgccgccat
      181 cgccctcgag gtcgagaaag cgctcgaaag cggcgatggc ggcgcgccgc ttgtcgagcc
      241 gcgcgttcag ctgtcccgcc tcgaacagca gcgccggccg gtccggcgcg atcgccggca
      301 tgcgttcgag cgacagcgcc gcgcccgtcc aatcctcgcg cttggcgagc ctcaggcgga
      361 cgttgttctc cagccgcagc agcacgtcgc gatcggttac ggggtcgaaa tgctgcggat
      421 gcagttcggc atccggaccc agcacctgcc gcaacaggac gcgcaagtcg gcggcctctc
      481 gcaccgtgcc gtcatggaag ggatcgatca cgtgccgcgc gccttcgatg ccgacgcgga
      541 tcaggaaatg cgccgggaag gccagcccgt cggcgtccca gccctgggcg cgggcgacgt
      601 gcagatagag gatcgacagc gccaccggca ggcccttgcg ccgttcgatc acgcgcacga
      661 ggtcggcatt ctgcagatcg tcgtaggagt cgctgtcgcc gcgataggcg taggagcgcg
      721 cgacgacctc cgccagcgag tcgggcgagg gaccgcgccg gcgcaccagg tcgccgagat
      781 cggacgccat cgccgccaca tgctggcgga acggcgtaag gtcgcgcgcc tcgccgctcc
      841 tgagcacgct caacaccagc gccgcttcca gaatatcgag gcgctcgccg tcgccggcgc
      901 aaagctcgcg caaacggtcc agtcgcatca ctccggcggc cgccagacgt cgggcaggtg
      961 gcgcggccac aggctgccca ccagcacggc gtcgaaacgc accgaatggg cggcgtagcg
     1021 cggatggcgg gccaggaaca ggctggcggc ccgcgccacg cggccgaact ggcggccgcc
     1081 cagggcgtcg gtggcggtcg gaacgtcggc gcgcgccttg acctcgacaa aggccagcac
     1141 gccgccgcgc cgcacgacga tgtcgatttc gccgagcttg gtcttgtagc gccgggccag
     1201 gacagaataa ccggccagcc gcagccgcca caccgcgcgc cattcggcga catggccgag
     1261 ccggtaagcc gcctggcggg cctcggtcgt cacgagacgg cctcgcgctt gagctcgagc
     1321 gcccgcgcat agacgtcgcg gcgtttcaag ccatagcgcg ccgccacctc ggccgcggcg
     1381 tccttcagcg aggcgccggc catcgccgtc agcagcgcct tgtcgagctt ggccgcggca
     1441 ggcgccacag cctcgtccgg cggaccgatg acaatggcga tttcgccttt cacctcggga
     1501 tgccgggcat agtggtcggc cagctcggtg agcggcgcgc gccggacctc ctcgaagagc
     1561 ttggtgagtt cgcgcgcgat ggcagccggc cgcggcccca gaagatcggc gagatcaacc
     1621 aaggaggcgg cgagccggtg cggcgcttcg aagaagacca gggtggacgg cacgctcgcg
     1681 gcggcggaga tggcgcgccg acgttcgact tcctt
//
LOCUS       DASWGA010000809        13811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_336693, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000809 DASWGA010000000
VERSION     DASWGA010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 13811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13811
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336693"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="VF991_18935"
     CDS             <1..314
                     /locus_tag="VF991_18935"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX9558575.1"
                     /translation="RLGSRAFDILAALVERAGEVVGKEQLMARAWPQTFVEDANVKIQ
                     VSALRRALGDGQGGHRYIATVSGRGYNFVAPVRRSRYWPHQLHQSSRRRSTICPSPSP
                     A"
     gene            679..1068
                     /locus_tag="VF991_18940"
     CDS             679..1068
                     /locus_tag="VF991_18940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558576.1"
                     /translation="MFDIYVCEPRRIVLIRFRGQLSEADFTALDASARATPQAGEYDC
                     IFDFTGVEKAELATDFVSRRGDLPQAFQDRERIYVVAHDDLKLLMRLYAAYQTSKEWR
                     VPVIVEKLDDVFERLGVTLSDFRRRER"
     gene            complement(1148..2059)
                     /locus_tag="VF991_18945"
     CDS             complement(1148..2059)
                     /locus_tag="VF991_18945"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9558577.1"
                     /translation="MIRYRKLGYVELMVTDLERSAAFYRDIVGLEPAGEGADGERRFR
                     CSEDPYAVVLHQAEQPGFKRGGWMLEDERQFASLHAALKSAGVAFEALSDAECKGRGL
                     GRATRTVEPNMGTTLEFYLLPAATRLELFSPTLAKIQRLGHVVWATPHYEAANAFFRD
                     VLNFAESDRLGEGITFYRAFPNPYHHGIGIGRSARNHFHHLNFMVTEIDDVGRGLARL
                     KSKDVPVVYGPGRHPASTSVFLYFLDPDGMTLEYSYGMEEFPEIGARAPRRLEPTPAN
                     FDSWGSWRDPRMSTTGEIAAYKVTGAA"
     gene            complement(2145..3704)
                     /locus_tag="VF991_18950"
     CDS             complement(2145..3704)
                     /locus_tag="VF991_18950"
                     /inference="COORDINATES: protein motif:HMM:NF023580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3592 domain-containing protein"
                     /protein_id="HEX9558578.1"
                     /translation="MSGTNADRGNAVPELLRACVGALLALSALALWSYRDVVSSWFAT
                     SYTATIELTTTTERDDKRVERAFATAQSARPGEATFELVPGLSQIRHSVVHVTGPSRT
                     EAIAAAESLSQSMVAAFDAEGSGRLDASVRRRAYPAPGPTSTAVLAILAYGAPLLALV
                     GIALLWLGWRDWPADADGMPRAAVFTAIGFVSLSLVPFVMPGWMVMALFAMAIPGAIA
                     GTIVYKMRELRRTAQWPSAQGRIVRSGMRTVRRKQAGEATKVGNVPAVEYVFSVDGVE
                     YSGHRIGVGDITASSPQAEAVLERYRVGRTGPVFYNPDKPEEAVLERDPPARPAVVYG
                     IAAGVMLVGLAVVVTFTQASEIIGWLEPYFPPGAVVQGVLFCTAAGILMALFLVSDRR
                     TATAAARWPTTPGTILSSIAESHRTLVPRGRGQTIVVWSPVVEYSYGVDGRNYHSSRL
                     AFGGDVASSRAFADEIVARYPVGHEVTVHFDPANPSFAVLEPRVAFAWSTFLLTVAFF
                     AAALFFSGWRG"
     gene            3875..5083
                     /locus_tag="VF991_18955"
     CDS             3875..5083
                     /locus_tag="VF991_18955"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX9558579.1"
                     /translation="MAAASVLAPRILWAEQGEAPGVAAGVGTFEEVWRTVRDRFYDPH
                     LHGLDWPAVRERHLPDAERATSDEALARVINSMLSGLQASHTHYYTADEPEYYQLAGI
                     FAGALRRRGLDRAFPGGRVGYPGIGILSRADRHGRSTITGVIDGTPARQAGLIAGDAI
                     ISADGAPFKPVRSFRGKVGQPVMLGLSRADAFRQAAVTPVDIEPNKMFLDGLKASARI
                     VPANGRRIGYVHVWSYAGYAYQRALEDLVSEGALRDADALIWDLRDGWGGAMPQYLDL
                     FNTRAPTMQFTDRNGARGFEGVKWRKPVAMLVNGGTRSGKEVLAYGFKKYRLGEVIGT
                     RTEGAVLAATAFLIGGGLLLLAVSDVLVDGERLEGVGVAPTIDVQAGPPSVDGDDPQL
                     DRAVAVLSGT"
     gene            5202..6827
                     /locus_tag="VF991_18960"
     CDS             5202..6827
                     /locus_tag="VF991_18960"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HEX9558580.1"
                     /translation="MPSRRTLMRTSLAALAVAPLDAAVARADDGPVADTASGKVRGVT
                     SDGVRVFKGIPYGASTAGANRFMPPRKPEPWAGVRDAIAYAGRSPQASGAAQRPELAA
                     VWGPVDKLPVGEDCLTLHVWTPNLDNAKRPVMVWLHGGAFSYGSANSPRYDGSRIARR
                     NDVVVVAVNHRLNIFGHLDLSGTGDERFAASGNVGVLDLVAALEWVREHAAGFGGDPG
                     NVTIFGQSGGAGKVSALLAMPRAKGLFHKAIIQSGAGVRFAERERTTRLADAVLKQLE
                     LGPRQLDDLQALPLARLQEAIVPAQKTLPRPRYALLDRYNFGPVIDGQVLPAHPFDPA
                     ASALSDDVPVMIGGTKDESAIFLAPDDAVWNRTLGEEELRKRIAAVAGDAAASLLAYY
                     KRRDPAATPADLLIAGQTASNFHVRSTMLAERKAQHGKAAVWMYRFDWETPAFGGRLK
                     APHSMDVPFVFDTLDVIGEAHRKPHAQDLADRVSATWASFARNGDPGNKSIPTWPVYT
                     ADKRATMVFNDECRVVGDPDGEVRPLWSKIATT"
     gene            complement(6935..7804)
                     /locus_tag="VF991_18965"
     CDS             complement(6935..7804)
                     /locus_tag="VF991_18965"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9558581.1"
                     /translation="MTSQAVLYRRTVRNIAIAVAAVVLLVWTVFPFVWILLTSFKSPG
                     DIISVPPTFTFTPTIDNYAALVIGERGGQYSSTRPDFPRFFLNSMIISIGAVALSVVA
                     GIPAAYALARFTFPMKGAFGFVLMSFRFVPFIAFVIPLYVLYQQFGLYNTHAGLIFAY
                     QLITLPFTIWMLRSFFMEIPLEIQEAAKIDGASWLGVLTRVILPLSMPGISVTVILGF
                     MFSWNAFNYPLMLAGRQTFPVTVGAIQFISYEQVLWGQMAAATIVAALPQLVLSLMVQ
                     KYIVRGLTMGAVK"
     gene            complement(7804..8706)
                     /locus_tag="VF991_18970"
     CDS             complement(7804..8706)
                     /locus_tag="VF991_18970"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9558582.1"
                     /translation="MTTARRRRHWRRERFLPYLLLAPALVLLVGMVYPFGLGLYYSFT
                     SYWLQYPNRFRFVWFDNYVDLIGEPLFARALEFTLGFTLVAVVVQVGLGLAVALFLHA
                     RIPGRGAIRALMLLPLMMPPVITALMWKIMMASTNAGILNYLLSFLGVDPINWFGSTQ
                     GAIVSVLIIDTWGNLPFVALVLLGGLQALPTEPYEAARVDGAGPADILRYVTLPLLSP
                     FIVLAVLFRTMDSLRIFDVIYATTLGGPNEATTNLQIMAYQYSFQWYQMGKGMAQAIV
                     LLLLVVIVSYLLMRLWNRAAESTS"
     gene            complement(8720..10126)
                     /locus_tag="VF991_18975"
     CDS             complement(8720..10126)
                     /locus_tag="VF991_18975"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEX9558583.1"
                     /translation="MRLQRRRLSRLLLATPFTMGAVLSASAQNDEALAYYRQAKINWR
                     QAEGQSLTIGLNKHPFTESLLPLIPEFRRLTGINVDYLILPEAEYFTKLVADLSQQRG
                     EFSVIMTGPVRNWQYVPPNWILPLDDFLNNPKLTDLGWYKLEDFYPPLIAANRWNGKT
                     GGGVGEGPLYSLPVLEESYILAYRKDIFDQYNIKVPTTLEEMAEAARLVKKNAGIPGI
                     VARGTPSVASMGTGFMSGLKSYTDGQWSEFDDKLNANFHDPRSVKFTETWIAMVRDSG
                     PPNWANMQWYDAMEAFTAGQAGMIADADFFAANYEDPKKSKVAGKVGYALIPAGPGGK
                     PYAGLWTWALGINKATKNKDAAWLFVQWATAPRTLLNATIGYRNYNPARVSIMNDPRV
                     QEIMGSWGGGSYLKTVAKNLETARVAWIPQPERGRAGDIWARALHEIYFQRMSAADAL
                     KKASVEVDKVLKEAGIKP"
     gene            10283..10759
                     /locus_tag="VF991_18980"
     CDS             10283..10759
                     /locus_tag="VF991_18980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558584.1"
                     /translation="MGDNAEPGLSAAEIRDLRDIAGTMIPESPEHGVPGADDPAILDD
                     IARSLGRDLPVVRAALAAIAGKSGGAFAGMERHRREALIDDYYTSGGAPAVALGRVIL
                     GAYYRDDRVLLALKMEARPPFPKGYTLEQGDWSLLDAVRHRPPFWRDDRPSAAGKR"
     gene            10761..12377
                     /locus_tag="VF991_18985"
     CDS             10761..12377
                     /locus_tag="VF991_18985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX9558585.1"
                     /translation="MAQNQRVNERVDVLIIGSGASGAAVAWSLAETRMRILCLEQGDW
                     VRSTDFPSNGRDWEARRYTDFDISPNRRGRDTDYPVNDDNSVMKIANFNGVGGGTVIY
                     TAHWPRMHPSDFRVRSLDGVADDWPVDYWALERFYDENDRMMGVSGLAGDPGVPPRNP
                     PMPAIPLGKTGVRYAQAMNRLGWHWWPSDTTIATTDYDGRAACINLGHCTPGCAQGAK
                     ASTDITYWPLAIRAGVELRTRCRVREITTNEHGMAAGVVYYDADGREHFQPAEVVIVA
                     CNGVGTPRLLLNSTSARFPNGLANSSGLVGKNLMLHPWPIVSGYVDEALDGGRAPITS
                     MWSKQFYETDPERGFVRGYTLQFNRGTGPVNEAITSAATGRLPWGRDHHRVYRELFGY
                     RVSIGVACEDLPEEHNRVTLDPVLKDSHGIPAPRIDYTISENTRRMMEHGIARAQQIL
                     TEAGATRLHASRTVLNSPGHLLGTARMGEDPERSVVNAWGRCHDVKNLFIVDGSIWVT
                     SGGVNPTSTIQALALYIADQMKQRLATLFD"
     gene            12451..>13811
                     /locus_tag="VF991_18990"
     CDS             12451..>13811
                     /locus_tag="VF991_18990"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX9558586.1"
                     /translation="MPGYVASWDVIVAGAGPVGLTLAIDLGRRGARCLLIERSPTTLP
                     YPKMDRSNARTMEFYRRIGIADRVRALGYPADNPMDVFLTTRLSDPPIAVLKYPSVAE
                     RRQQIAESPNGAFLLEPYQLVSQNKLEPLLKEVAEATPNVTVRYGCGLEDFAQDDEGV
                     TVQARTASGAREELRASYLAGCDGGASTVRKKAGIRLEGQGRIRALVQVIFRSDELYG
                     KIVTGRGRHYNFVDANASTLIAQGCRTEFTLHTSLPADTDFRPVIQDLIGFPCAFEIT
                     HIVSWHHNLLLAEHYRDRRVFLAGDAVHLVIPSGGLGMNTGVGDAFDLAWKLAGTIHG
                     WGGPELLDGYERERRPIGRRNVDAAGWAAAGVPIWRALVTPEAYKDTPAGAEVRARLA
                     AAFDVEHRRMHGMVGVESGYSYAGSPLIADEPAAAWETSRYEPKALPGARIPHMWLDD
                     GQAL"
BASE COUNT         2452 a         4526 c         4624 g         2209 t
ORIGIN      
        1 tgcggctcgg cagccgcgcc ttcgacatcc tggcggctct ggtcgaacgc gccggcgagg
       61 tggtcggcaa agagcaactg atggcccgcg cgtggccgca gacattcgtc gaagacgcga
      121 acgtgaagat tcaggtaagc gcgctgcgcc gcgccctcgg cgacggccaa ggcggccatc
      181 gctacatcgc caccgtttca ggacggggtt acaactttgt tgccccggtg cggagaagcc
      241 gctactggcc tcaccagttg caccagtcgt cccggcgccg aagcacaatc tgcccttcgc
      301 cgtcacccgc atgatcggcc gcgaggaagc ggcggccgcg cgtcagggac tcagtgatgc
      361 aaagggaccc acgcggggcc atttggccta gatctgaccg ctgagaatcg gggctttttc
      421 gatgaacccc aaaattagga aaccgctgct ctatccagct gagctacggg gacgtgcctg
      481 agcactaaca aaatagacgc cgcctgtcag gttttccggc ctcgatcaga tagcgtcagc
      541 cgagccagcg gctcgcagtc gcgcagctca gatgtgcgcg gcagggttct tgcggtgctg
      601 gacagcatac ccctaccttg gccgcggtca cgtcgagagg ggggagggaa cgggaaagac
      661 tagtcacggg acagcagcat gttcgacatc tacgtttgcg agccccgtcg gatcgtcctc
      721 attcgcttcc ggggacaatt gtcggaggct gacttcacgg cgctcgatgc gtcagcgcga
      781 gctacacccc aagcagggga gtatgattgc atcttcgatt tcaccggagt cgagaaggcg
      841 gagctggcga cggatttcgt ttccaggcgc ggcgaccttc cgcaggcctt ccaggaccgc
      901 gagcggatct acgtcgtcgc ccacgacgac ctcaagttgc taatgcggct atatgcggcc
      961 tatcagacat ccaaggaatg gcgcgtcccc gtcattgtcg agaagctgga cgacgtattt
     1021 gagaggttgg gcgtgacact ctcggacttt cggcggcgag agcgctgaca atcaggatgc
     1081 caagcgcggt ctgagattct actcgatcac ctcgtcggcg gccgtgagga tcactgcggc
     1141 acggtggcta ggcggcgccc gtgaccttgt aggcagcgat ctcgcccgtc gtcgacatcc
     1201 gtggatcgcg ccaggagccc caggagtcga agttggccgg cgtcggttcc agccggcgcg
     1261 gcgcacgcgc gccgatttcg ggaaattcct ccatgccgta gctgtattcc agcgtcatgc
     1321 cgtcgggatc gagaaaatac aggaacacgc tggtcgatgc cggatggcgg ccgggcccgt
     1381 acaccaccgg cacgtccttc gacttcaggc gcgccaggcc gcggccgaca tcgtcgatct
     1441 cggtcaccat gaagttcagg tgatggaagt gattgcgcgc gctgcggccg atgccgatgc
     1501 catggtgata ggggttggga aaggcgcgat agaaggtgat gccctcgccg aggcggtcgg
     1561 actcggcgaa gttcagcacg tcgcggaaga acgcattggc cgcctcgtag tgcggcgttg
     1621 cccagacgac atggccgagc cgctggatct tggccaaggt cggtgaaaaa agttctagcc
     1681 tagtggcagc gggcagcagg tagaattcca acgtcgtccc catgttcggc tcgacggtgc
     1741 gcgtggcgcg acccagcccg cggcccttgc actccgcatc gctcagcgct tcgaaggcga
     1801 cgccggcgct cttgagcgcc gcatggaggc tcgcgaactg ccgctcgtcc tcgagcatcc
     1861 agccgccgcg cttgaagccc ggctgctcgg cctggtggag cacgacggca tagggatcct
     1921 ccgagcagcg gaagcgccgc tcaccgtcgg ccccctcgcc cgccggttcg aggccgacga
     1981 tgtcgcgata gaaggcggcg gagcgctcga ggtcggtgac catgagctcg acatagccca
     2041 gtttgcggta acggatcatg gcggccagtt cccttggaat gatgccgagc ttgccacagg
     2101 gccgatcgac ctggatagcc tgcaacgggt tccatgcccg ccgatcatcc gcgccagccc
     2161 gagaaaaaca gtgccgcggc aaaaaaagcc acggtcagca ggaaggtcga ccaggcgaag
     2221 gcgacgcggg gctcgagcac agcgaaggaa ggattggcgg gatcgaaatg aaccgtcacc
     2281 tcgtggccga cgggataacg ggcgacgatc tcgtcggcaa aggcgcgcga ggatgcgaca
     2341 tcgccgccga acgcgaggcg agagctgtga tagttgcgcc cgtcgacgcc gtagctgtac
     2401 tcgaccaccg gcgaccatac gacgatcgtc tgcccacggc cgcgtggcac gagcgtgcgg
     2461 tgcgattcgg cgatgctcga caggatcgtc cctggcgtcg ttggccagcg tgctgcggcc
     2521 gtagcggtgc gccggtcgga cacgaggaat agcgccatca ggattccggc ggctgtgcag
     2581 aacaacacgc cctgaacgac ggcgccgggc ggaaaatacg gctccagcca accgatgatc
     2641 tcgctggctt gggtgaaggt gacgacgacg gcaaggccaa caagcatcac ccccgcggcg
     2701 atgccgtaca ctaccgccgg gcgggccggc gggtcgcgct ccagcacggc ctcctcgggc
     2761 ttgtcgggat tgtagaagac cggcccggtg cggccgacac gatagcgctc gagcaccgcc
     2821 tcggcttgcg gactgctggc ggtgatgtcg ccgacaccaa tccggtgtcc cgagtattcg
     2881 acaccgtcga cggaaaagac atattcgacc gccggcacgt tgccgacctt ggttgcttcg
     2941 ccggcctgct tacgccgaac ggtgcgcatc ccggagcgca cgatgcgccc ttgagccgac
     3001 ggccattggg cggtgcgccg cagctcgcgc atcttgtaga cgatcgtccc ggcaatcgcg
     3061 ccgggaatcg ccatggcaaa cagcgccatc accatccatc caggcatgac gaagggcacg
     3121 agagacaacg agacgaagcc gatcgcagtg aagacggccg cccgaggcat cccatcggcg
     3181 tcggccggcc agtcacgcca gccgagccaa agcaaggcga tgccgaccag cgcgagcagc
     3241 ggagcgccgt aggcgagaat ggccagaacg gcggtgctcg tcgggccagg cgcggggtag
     3301 gcccggcggc gcacgctggc gtcgagtcga ccggagcctt cggcgtcgaa agcggcgacc
     3361 atggattgcg acagggattc ggcggcagcg atcgcctcgg tgcgggacgg ccccgtcaca
     3421 tggacgacac tatggcggat ctggctcagg ccgggcacca gctcgaaggt tgcctcgccc
     3481 ggccgcgccg attgcgcggt ggcgaaggcg cgctcgacgc gcttgtcgtc gcgttcggtc
     3541 gtcgtggtga gctcgatcgt cgctgtgtag gatgttgcga accaggacga gacgacgtcc
     3601 cggtacgacc agagtgccag cgcggacagc gccagcagcg ctccgacgca ggccctgagc
     3661 aattccggca cggcgttacc gcgatcggca tttgtcccgc tcatggcaac caatctagcc
     3721 aaatatcgcc gacaattcga ccagctccca tcgtctgccc tcacgccggc ttaattcccg
     3781 gtcaatagga aaagagcttc actcgcgagg tcgcccgttg aaccagctca tgcacgccgc
     3841 cccgccgcgg cgccactttt tgcggctgac ggcaatggcc gcggcatccg tcctggcgcc
     3901 gagaatcctg tgggccgagc agggcgaagc gcccggcgtc gccgcaggcg tcggcacgtt
     3961 cgaagaggtt tggcggaccg tgcgcgaccg gttctacgat ccgcatctgc acgggctgga
     4021 ctggccggcg gtgcgggaac gccatttgcc ggacgccgaa cgggcgacct ccgacgaggc
     4081 gctggcccgc gtcatcaaca gcatgctgtc cgggctgcag gcctcgcaca cgcactatta
     4141 cacggcggac gagccggagt actaccagct cgcgggtatc tttgccggcg cgctgcggcg
     4201 gcgcggactg gatcgggctt ttccgggcgg ccgcgtcggg tatcccggca tcggcatcct
     4261 gtcgcgcgcc gacaggcatg gccgcagcac gatcaccggc gtcatcgacg gcacgccggc
     4321 ccggcaggcc ggcctaatcg ccggcgatgc gatcatctcg gccgacggtg cgccgttcaa
     4381 gccggtgcga tcgtttcgcg gcaaggtcgg ccagccggtc atgctgggtc tcagccgtgc
     4441 cgacgctttc aggcaagcag cggtgacgcc ggtcgatatc gagccaaaca agatgttcct
     4501 ggacggcttg aaagccagcg cccgcatcgt gccggccaac gggcggcgca tcggctatgt
     4561 ccatgtctgg agctacgccg gctacgccta tcagcgggcg ctcgaggatc ttgtctcgga
     4621 gggtgcgctc agggatgccg acgcgctgat ctgggacctg cgcgacggct ggggcggcgc
     4681 aatgccccag tatctcgacc tgttcaacac gcgggcgccg accatgcagt tcaccgaccg
     4741 caacggcgcc cggggattcg agggcgtgaa gtggcgcaag cccgtcgcta tgctggtcaa
     4801 cggcggcacc cgcagcggca aggaggtctt ggcctacggc ttcaagaaat accggctggg
     4861 cgaggtgatc ggcacgcgga ccgagggcgc cgtgctggcg gcgacggcat tcctgatcgg
     4921 cggcggcttg ctgctgctgg ccgtcagcga cgtgctggtc gacggcgagc ggctggaagg
     4981 cgtcggtgtc gccccgacga tcgacgtgca ggccggcccg ccgtccgtgg acggcgatga
     5041 tcctcagctc gatcgcgcgg tcgcggtcct gtccgggact tgaactccca tcggcggcgc
     5101 gtggtggagc tcttacccct gcccatcatg aggctcctct tgccctagcg cgggagagga
     5161 atttgagttg tagttcgctg gcctgctgga aagggagcgc catgccgagc cgtcgaacct
     5221 tgatgcgtac gtcgctggcc gcgctggccg tggcccctct cgacgccgcc gtcgcgcggg
     5281 ccgacgacgg gcccgttgcc gacaccgcct cgggcaaagt tcgcggcgtc acgtcggacg
     5341 gcgtgcgggt cttcaaaggc attccctatg gcgcctcgac cgccggcgcc aaccgcttca
     5401 tgccgccccg caagcccgaa ccctgggcgg gcgttcgcga cgcgatcgcc tatgccggcc
     5461 gttcgcccca ggcgagcggc gccgcgcagc gcccggaact ggcagccgtc tggggaccgg
     5521 tcgacaagct gccggtcggc gaggattgcc tgacgctgca cgtctggacc cccaacctcg
     5581 acaatgcgaa gcgtcccgtc atggtctggc tgcatggcgg cgccttctcc tacggatcgg
     5641 ccaactcgcc acgctatgac ggcagccgaa tcgcccggcg caatgacgtc gtcgtcgtcg
     5701 ccgtcaacca ccggctcaac atcttcggcc acctcgatct gtcgggcacc ggcgacgagc
     5761 ggttcgccgc gtcgggaaac gtcggcgttc tcgatctcgt ggcggcgctg gagtgggtgc
     5821 gcgagcacgc tgcaggcttc ggcggcgatc cgggcaacgt caccatcttc ggccagtccg
     5881 gtggcgccgg gaaggtcagc gcgctgcttg cgatgccccg cgccaaggga ctcttccaca
     5941 aggcgatcat tcaaagcggc gccggcgtgc gcttcgccga gcgcgagcga acgacgcgcc
     6001 ttgccgatgc cgtcttgaaa cagctcgagc tcggtccccg gcagctcgac gacctgcagg
     6061 cgctgccgct cgcgcgcctg caggaagcca tcgtacctgc gcagaagacc ctgccgcgac
     6121 cgcgctatgc gctgctcgac cgctacaatt tcgggccggt gatcgacggg caggtgctgc
     6181 cggcccatcc cttcgatccg gccgcctccg ccttgtcgga cgacgtaccg gtcatgatcg
     6241 gtgggaccaa ggacgagtcg gcgatcttcc tggcgccgga cgatgccgtg tggaaccgca
     6301 cgctcggcga ggaggagctg cgcaagcgca tcgcagccgt cgccggcgac gcggccgcga
     6361 gcctgctggc gtattacaag cggcgcgatc ccgccgcgac tccggcggat cttctgatcg
     6421 ccgggcagac cgcatcgaac ttccacgtgc gctcgacgat gctggcggag cgcaaggccc
     6481 agcacggcaa ggcagccgtc tggatgtacc ggttcgactg ggagacgccg gcgttcggcg
     6541 gtcggctgaa ggcgccgcac tcgatggatg tgccgttcgt cttcgatacg cttgacgtga
     6601 tcggcgaggc acaccgcaag ccacacgcgc aggatctcgc cgaccgggtt tcagcgacct
     6661 gggccagctt tgcgcgcaac ggcgatcccg gcaacaagtc gatcccgacg tggcccgtct
     6721 acaccgccga caagcgcgcc acgatggtgt tcaacgacga gtgccgggtc gtaggcgacc
     6781 cggatggtga agtgaggccg ctgtggagca agatcgcaac cacttgacga cgttttaggc
     6841 tggcgcgtca tggtcttccg gaccgcgagc gtctcgctcg ctcatgatca tgagcgagcg
     6901 agacgctcac ggtccaaaag agcaagataa agactcattt caccgcgccc atggtgaggc
     6961 cgcgaacgat atacttctgc accatcaggc tgagcaccag ttgcggcagg gctgcgacga
     7021 tcgtcgccgc ggccatctgt ccccacagca cctgctcata ggagatgaac tggatggccc
     7081 cgaccgtcac cgggaacgtc tggcggcccg cgagcatcag cggatagttg aacgcattcc
     7141 agctgaacat gaaccccagg atgaccgtga ccgagatgcc cggcatgctc agcggcagga
     7201 tcacccgggt gagaacaccc agccaggaag cgccgtcgat ctttgccgct tcctggattt
     7261 ccaaggggat ctccatgaag aagctgcgca gcatccagat ggtgaatggc agggtgatga
     7321 gctgataggc gaagatcagc ccggcatgcg tgttgtacag tccaaactgc tggtagagga
     7381 cgtagagcgg gatcacgaag gcgatgaacg gcacgaaccg gaagctcatg aggacgaagc
     7441 cgaacgcccc cttcatcggg aaggtgaagc gggccaatgc gtaggcggcg gggatgccgg
     7501 ccacgaccga cagcgccact gcgccgatcg agatgatcat gctgttcagg aagaaccgcg
     7561 gaaagtccgg gcgcgtggag gagtactgtc ccccccgctc gccgatgacc agcgccgcgt
     7621 agttgtcgat cgtcggcgtg aaggtgaacg tcggcggcac cgagatgatg tcgcccgggc
     7681 tcttaaacga cgtcagcagg atccagacga acggaaagac ggtccagacg aggagcacga
     7741 ccgccgccac cgcgatggcg atattgcgca cggtgcgccg gtagagcacg gcctgagacg
     7801 tcatcaggac gtgctctctg ctgcacgatt ccaaagccgc atcagcaagt agctgacgat
     7861 gacaaccagc aggagcagca caatggcttg ggccatgcct ttgcccatct ggtaccactg
     7921 gaaggaatat tggtacgcca tgatctggag gttggtggtc gcctcgttcg gcccgcccaa
     7981 cgtggtggcg tagatcacgt cgaagatccg cagcgaatcc atcgtccgga agaggacggc
     8041 gagcacgatg aacgggctca ggagcggcaa cgtgacatag cgcaggatgt cggcagggcc
     8101 ggcgccgtcg acccgagccg cttcgtacgg ttcggtgggc agagcctgca gcccaccgag
     8161 cagcaccaag gcgacgaacg gcaggttgcc ccacgtatcg atgatgagga ccgagacgat
     8221 tgccccttgc gtggagccga accagttgat gggatcgacg ccgagaaacg acagcaggta
     8281 gttcaggatg ccggcattcg tcgaggccat catgatcttc cacatcagcg ctgtgatcac
     8341 cggcggcatc atcaacggca ggagcatcag cgcgcggatc gcgccgcgcc cagggatacg
     8401 cgcatgcaag aacagcgcca ccgcgagccc cagcccgacc tggaccacga ccgccaccag
     8461 cgtgaatccg agcgtgaact cgagcgcgcg ggcgaacagc ggctcgccga tcaggtcgac
     8521 gtagttgtcg aaccaaacga agcggaaacg attgggatac tgcaaccaat agctggtgaa
     8581 actgtagtac agccccaagc caaatgggta caccattccc acgaggagga ccaaagccgg
     8641 cgccagcaac agatacggca gaaacctctc ccgccgccag tgccggcgcc ttcgcgcggt
     8701 ggtcacctgc ctggcgccgc tacggcttga taccggcttc cttgagcacc ttgtcgactt
     8761 cgacgctcgc cttcttgagc gcgtcggccg cggacatgcg ctggaagtag atctcgtgca
     8821 gcgcgcgcgc ccagatgtcg ccggcccgcc cgcgctcggg ctggggtatc cacgcaaccc
     8881 gcgccgtttc gaggttcttc gcgacggtct tcaggtagct gccgccgccc cacgacccca
     8941 tgatctcctg gacgcgcgga tcgttcatga tcgacacacg ggccggattg tagttgcgat
     9001 agccgatggt ggcgttgagc agggtgcgcg gcgcggtcgc ccactgcacg aagagccagg
     9061 ctgcgtcctt gttcttggtc gccttgttga ttcccagcgc ccacgtccaa aggccggcgt
     9121 acggtttgcc gcccgggccg gccgggataa gcgcgtagcc gaccttgccg gcgaccttcg
     9181 acttcttggg gtcttcgtaa ttggcggcga agaagtcggc gtcggcgatc atgccggcct
     9241 gaccggccgt gaaggcctcc attgcgtcat accactgcat gttggcccag ttcggcggac
     9301 cgctgtcgcg gaccatagcg atccacgtct ccgtgaactt caccgagcgc ggatcgtgga
     9361 agttggcgtt cagcttgtcg tcgaactcgc tccactggcc gtcggtgtat gacttcagcc
     9421 cgctcatgaa gccggtgccc atgctcgcca cgctcggcgt gccgcgggcc acgataccgg
     9481 ggattccggc gttcttcttc accagtcgcg ccgcctcggc catctcttcg agggtcgtcg
     9541 gcaccttgat attgtactgg tcgaagatgt ctttgcggta cgccaggatg tagctctcct
     9601 cgagcaccgg aagcgaatag agcgggccct cgccgacgcc gccgccggtc ttgccgttcc
     9661 agcggttggc ggcgatcagc ggcggataga agtcctcgag cttgtaccag ccgagatcgg
     9721 tcagcttcgg attgttgagg aagtcgtcca gcggcaggat ccagttcggc ggcacgtatt
     9781 gccagttgcg gaccgggccg gtcatgatga ccgagaattc cccgcgctgc tgcgagagat
     9841 cggcgacgag cttggtgaag tattccgcct cgggcagaat caggtaatcg acattgatgc
     9901 ctgtcaggcg cctgaactca gggatgagcg gcagcagcga ttcggtaaac gggtgcttgt
     9961 tcaacccgat cgtgagcgac tggccctcgg cctgccgcca gttgatcttg gcctggcggt
    10021 agtacgcaag ggcctcgtcg ttctgtgccg acgcgctcag gacggctccc atcgtgaagg
    10081 gcgtggcgag taacagacgg ctgagccgtc gacgctgtaa gcgcatgcgt tctccctttt
    10141 acagccgatt gttattgaat gggcagatct ggctaaccga gccgctggcc catctggctg
    10201 gtgaggttaa ccggcttggc acggcctgcc aaacggtgtg taaacccgct gtagaccgac
    10261 tccgcacgca agcaggactc tcatgggcga caacgccgaa cccggactct ccgccgctga
    10321 aatccgcgac ctgcgcgaca tcgccgggac gatgatcccc gaaagccccg agcacggcgt
    10381 gcccggcgcc gacgatcccg ccatcctgga cgatatcgcg aggtccctgg gccgcgacct
    10441 tcccgtggtc cgcgcggccc tcgcggcgat cgccggaaag tcgggcggcg ccttcgccgg
    10501 catggaacgc cacagaaggg aagcgctgat cgacgactac tacacgagcg gcggcgcccc
    10561 ggcagtggcc ctcgggcggg tgatccttgg cgcctattac cgcgatgacc gtgtcctgct
    10621 ggcgctgaag atggaggccc gcccgccctt cccgaagggc tacaccctgg aacagggaga
    10681 ctggtccctg ctcgacgcgg tgcgccatcg cccgccgttc tggcgggacg accgcccttc
    10741 agctgccggg aaacgctgag atggcccaga atcagcgggt caacgagcgg gtcgatgtcc
    10801 tgatcatcgg gtccggcgcc tccggtgcgg cggtggcctg gagcctggcc gaaacccgga
    10861 tgcgcatcct gtgcctggaa cagggcgact gggtcaggtc gaccgacttc cccagcaatg
    10921 gccgcgactg ggaggccagg cgctacacgg atttcgacat cagcccgaac cgccgggggc
    10981 gcgacaccga ctatccagtg aacgacgaca actcggtgat gaagatcgcc aacttcaacg
    11041 gtgtcggcgg cggcacggtg atctacacgg cgcactggcc gcgcatgcac ccgtcggact
    11101 tccgcgtcag gtccctggat ggcgtggcgg acgactggcc ggtcgactac tgggcgctcg
    11161 aacgcttcta cgacgagaac gaccgcatga tgggcgtgtc cggcctcgcc ggagaccccg
    11221 gcgtgccgcc gcgcaacccg ccgatgccgg cgatcccgct gggcaagacc ggcgtgcgct
    11281 atgcgcaggc gatgaacagg ctgggctggc actggtggcc atccgacacc accatcgcaa
    11341 ccaccgacta tgacggccgg gcagcctgca tcaatctcgg gcactgcacg ccgggctgcg
    11401 cgcagggggc caaggccagc accgacatca cctactggcc gctcgccatc cgcgccgggg
    11461 tggagctgcg cacgcgctgc cgcgtgcggg agatcaccac caacgagcac ggcatggccg
    11521 ccggcgtcgt ctactacgat gccgacggcc gcgagcactt ccagccggcc gaggtcgtga
    11581 tcgtggcctg caatggcgtc ggcacgccgc gcctgctgct gaactcgacg tcggcacggt
    11641 ttcccaacgg gctcgccaac tcctccggcc tggtcggcaa gaacctgatg ctgcatccct
    11701 ggccgatcgt gtccggctat gtcgacgagg cgctggatgg cgggcgtgcg ccgatcacct
    11761 cgatgtggag caagcagttc tacgagaccg atcccgagcg cggcttcgtg cgcggctaca
    11821 cgctgcaatt caaccgcggc accggcccag tgaacgaggc gatcaccagc gccgcgaccg
    11881 gccgcctgcc ctgggggcgc gaccatcatc gcgtctaccg cgagctgttc ggctaccgtg
    11941 taagcatcgg cgtcgcctgc gaggatcttc ccgaggagca taaccgcgtc accctggatc
    12001 ccgtgctgaa ggacagccac ggcatccccg caccgcggat cgactacacg atcagcgaga
    12061 acacgcgccg catgatggag cacggcatcg cccgggccca gcaaatcctg accgaagccg
    12121 gcgccacgag gctgcatgcg tcgcgcaccg tgctgaacag cccgggccac ctgctgggca
    12181 cggcgaggat gggcgaggat ccggaacggt cggtggtgaa tgcgtggggc cgttgccatg
    12241 acgtgaagaa cctgttcatc gtcgatggca gcatctgggt gacctcgggc ggcgtgaacc
    12301 cgacctccac gatccaggct ctggcgctct atatcgcgga tcagatgaaa caacggctgg
    12361 cgacgctgtt cgattgacgc aatgtcgatg aacatgacag tgccgtccgt ggtgctacac
    12421 tttacggact caaagggggg tggaacgccg ttgcctggct atgttgcctc ttgggacgtg
    12481 atcgttgccg gcgccgggcc ggtcggcctg acgctggcca tcgaccttgg ccggcgcggc
    12541 gcgcgctgcc tgctgatcga gcgcagcccg accacgctgc cctatccgaa gatggaccgc
    12601 tcgaacgcgc gcaccatgga gttctatcgc cgcatcggca tcgccgatcg ggtgcgggcg
    12661 ctgggttatc cggccgacaa cccaatggac gtgttcctga ccacgcggct cagcgatcca
    12721 ccgatcgcgg tgctgaagta cccctcggtg gcggagcgtc gccagcagat cgccgagagt
    12781 ccgaacggcg ccttcctgct ggaaccctac caactggtgt cgcagaacaa gctggagccg
    12841 ctcctgaagg aggtggccga ggcgacgccc aacgtcaccg tgcgctacgg ctgcgggctg
    12901 gaggacttcg cccaggacga cgagggcgtg acggtgcagg cccgcaccgc ttccggcgca
    12961 cgtgaggaac tgcgggcgag ctacctcgcc ggctgcgacg gcggcgccag cacggtgcgc
    13021 aagaaggccg gcatcaggct ggaaggccag gggcgcatcc gcgcgctggt gcaggtgatc
    13081 ttccgctccg acgagctcta cggcaagatc gtcaccggcc gggggcgaca ctacaatttc
    13141 gtcgacgcca atgcctcgac cctgatcgcg cagggctgcc gcacggaatt caccctgcat
    13201 acatcgctgc cggcggatac cgacttccgg ccggtgatcc aggacctgat cggtttcccc
    13261 tgcgccttcg agatcacgca catcgtgtcg tggcaccaca acctgctgct cgccgagcac
    13321 tatcgcgacc gccgcgtctt cctggccggc gacgcggtgc atctggtgat cccgagcggc
    13381 gggctcggca tgaacacggg agtcggcgac gccttcgacc tggcgtggaa gctcgccggc
    13441 acgatccatg gctggggcgg accggaattg ctcgacggct atgagcgcga gcgtcgcccg
    13501 atcggccggc gcaacgtcga cgccgccggc tgggcggcgg ctggcgtgcc gatctggcgc
    13561 gccctggtga cgccggaggc ctataaggac acgcccgccg gcgcggaggt gcgcgcccgg
    13621 ctggcggcgg cgttcgacgt cgagcaccgg cgcatgcacg gcatggtggg agtcgaatca
    13681 ggctattcct acgccggctc gcccttgatc gccgacgagc cggcggcggc gtgggagacc
    13741 agccgctacg agcccaaggc gctgcccggc gcacgcatcc cgcatatgtg gctggacgac
    13801 ggccaagcgc t
//
LOCUS       DASWGA010000810         4517 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1486922, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000810 DASWGA010000000
VERSION     DASWGA010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4517
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1486922"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..964)
                     /locus_tag="VF991_18995"
     CDS             complement(<1..964)
                     /locus_tag="VF991_18995"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9558587.1"
                     /translation="MTELLDQGAAAIAAAVRTGSTSARDMAEAAIARVGARNKALTAI
                     VDFDPTEARAAADAVDARRKQGFDGPILGVPYTVKDTTWVKGRRVTNGSLLWKDFRPP
                     RDAVAVERLRNAGGVFLGMTNTPEMAAKGHTENKVYGPSRHPMNLAMTPGGSSGGAAA
                     ALAAGFTPIALGTDGGGSGRRPASHCGVVGLKTSAGAIPSPFGFGGAYGPLYGVTAPM
                     GRTVADARVAFEVMAGPDPRDPHSVALLDVPPPANPRIAVSPRLGLNVAVDADVMAAF
                     DAAIARLRATGWRIEEADVTWPDNTTETAFTAVNAAASALLYGER"
     gene            1011..1667
                     /locus_tag="VF991_19000"
     CDS             1011..1667
                     /locus_tag="VF991_19000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007816498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2161 family putative PD-(D/E)XK-type
                     phosphodiesterase"
                     /protein_id="HEX9558588.1"
                     /translation="MPLESDLYAPVKALLEGQGYVVKGEVRGCDVVAVRGAEPPVIVE
                     LKRAFGLGLVLQGIDRLAVSDRVYLAVGQWPKRMKNVRKLCRRLGLGLMVVAGTRADI
                     VLDPVPYRPRLDKHKTGRLLGEHQRRVGDPNRGGSTTKVPMMTAYRQEALRCAELLAS
                     NGPMKLAALRAAADAPRAATILQQDVYGWFERVERGIYTISPAGRRGLQMFARPSASI
                     "
     gene            1731..2687
                     /locus_tag="VF991_19005"
     CDS             1731..2687
                     /locus_tag="VF991_19005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX9558589.1"
                     /translation="MRRLEIVHRTRYDYSAPVTLGEHRLMFRPRDSRDLRLLHTGLAI
                     EPAAQVRGIHDPFGNSIAIAAFEGPTQALELTSTIRLEHFGLPPELPPIEEYARKLPF
                     AYLAEEAPDLTRYVERHYPDPNAALSSWTKQFLEGEEGGADTFATLTRMCNGIQETLK
                     YAMRFEPGTQPPATTLESGSGTCRDYALLMIEGARAFGLAARFITGYLYDPALDEAAG
                     GTANPAFAHAWMEVYLPGAGWVEFDPTNGIIGSERLIRVAVGRDPEQAMPIKGTFTGA
                     ADVAVNTMVDVQVKTLAPLAAAEAPGPAPAPAAAPQEPITQS"
     gene            2742..3356
                     /locus_tag="VF991_19010"
     CDS             2742..3356
                     /locus_tag="VF991_19010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558590.1"
                     /translation="MNPARLLAACLAAVVAFAVAAAAVAQSPPTRLRGSIAAIDGKTA
                     TIATREGSSVKVNLADNWVVMLVSPMTMADIKENSFVGIASAKGPDGSLNALEVLVFP
                     EAARGSNEGHYPWDLQPESMMTNATVATVASASDGQTLTLKYKDGTQTIKVKPGTPIV
                     TFAPGDRADAKVGAKVFLGATKGADGSLTAARLLVGKDGLTPPM"
     gene            complement(3363..>4517)
                     /locus_tag="VF991_19015"
     CDS             complement(3363..>4517)
                     /locus_tag="VF991_19015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEX9558591.1"
                     /translation="HGHDRTGEIGKAALLADGLRFSGTAEDLRLADFHIVTVPTPIDV
                     SKQPNLEPLKQASATLGGILKPGDIVVYESTVYPGVTEDVCIPVLEQSSGLKWRTDFN
                     VGYSPERINPGDRERRFETILKVVSADTPETLEIVDAVYRSAVRAGTHRAPSIRVAEF
                     AKVLENTQRDVNIALINEVALICDRLGVDTRDVLQAAGTKWNFLPFRPGLVGGHCIGV
                     DPFYIAHKAESVGYHPEVIHSGRRVNDGMGFYVANRVARSIMRSAGNGRPLVTVLGVT
                     FKENVPDIRNTRVIDIVRELADFGIAVQLHDPMADGELLRAEYRLSLTPFGELKPADA
                     VVLAVAHRAYRDGGWDLVQPLLKSSQGFVADVPALLDRATVPAGVTLWRL"
BASE COUNT          736 a         1509 c         1575 g          697 t
ORIGIN      
        1 gacgctcgcc gtagagcaga gcgcttgccg cggcgttgac cgcggtgaag gcggtttcgg
       61 ttgtgttatc aggccacgtc acgtccgctt cctcgatgcg ccagccggtg gcgcgcagtc
      121 tcgcgatcgc ggcgtcgaaa gccgccatga cgtcggcatc gaccgcgaca ttgagaccga
      181 gccgcggact gaccgcgatg cgcgggttgg cgggcggtgg cacgtcgagc aatgccaccg
      241 aatgcggatc gcgcgggtcg ggtccggcca tgacctcgaa cgccaccctg gcatcggcga
      301 cggtgcggcc catcggcgcc gtcacgccat agagcgggcc ataggcgccg ccgaaaccga
      361 agggcgaggg gatggcgccg gccgaggttt tcagcccgac gacaccgcaa tgcgaagcgg
      421 gccggcgtcc cgagccgccg ccgtcggtgc ccagggcgat gggggtgaag cccgcggcaa
      481 gggcagcggc cgcaccgcct gacgagccgc ctggagtcat cgccaggttc atgggatggc
      541 gggagggacc atagaccttg ttttcggtat ggcccttggc cgccatctcc ggcgtgttgg
      601 tcatgccgag gaacacgccg cccgcgttgc gcagccgctc caccgcgacg gcatcgcgcg
      661 gcggcctgaa atccttccac agcagcgagc cgttagtgac ccggcggcct tttacccagg
      721 tcgtatcctt cacggtgtag ggcacgccga ggatcggccc gtcgaaaccc tgcttgcgcc
      781 gggcgtcgac ggcatcggct gcggcgcgcg cctcggtggg atcgaaatcg acgatggcgg
      841 tgagcgcctt gttgcgcgcc ccgactcgcg caatggccgc ctcggccatg tcgcgcgcgc
      901 tcgtactgcc cgtccgcact gcggcggcaa tggcggcggc accctgatcc agcaactcgg
      961 tcatgcttat cccccgtggc gtctttctta gcatgatacg gtgtgccgcc atgccgttgg
     1021 agagcgacct ctatgcgccc gtgaaggcgc tgctcgaggg acagggatat gtcgtgaagg
     1081 gcgaggtgcg cggctgcgat gtggtggccg tgcgtggcgc cgagccgccg gtgatcgtcg
     1141 agctgaagcg cgccttcggg ctgggactgg tcctgcaggg catcgaccgg ctggcggtga
     1201 gcgaccgcgt ctacctcgcc gtcggccagt ggcccaagcg gatgaagaac gtgagaaaac
     1261 tctgtcgccg gctggggctt ggcctgatgg tggtggccgg cacgcgcgcc gacatcgtgc
     1321 tcgatcccgt gccctaccgg ccgcggctcg acaagcacaa gacaggcagg cttttgggcg
     1381 agcaccagcg tcgcgtcggc gatcccaacc gcggcggctc gacaaccaag gtgccgatga
     1441 tgacggccta tcgccaggag gcgttgcgct gcgccgagct cttagccagc aacggtccca
     1501 tgaagttggc ggccttgcgc gcggcggccg acgcgccgcg cgcggccacc atcctgcagc
     1561 aggacgtcta tggctggttc gagcgggtcg agcgcggcat ctatacgatc agccccgccg
     1621 gccggcgcgg cctgcagatg ttcgcgcgcc cgagcgcttc gatttgagca gcggcgcggc
     1681 ctcgccgctc gggctgcaac catcgtcgcc gtggtgcatt atcccagccc atgcgcaggc
     1741 tcgagatcgt ccatcgcacg cgctacgact attcggcgcc ggtgacgttg ggcgagcatc
     1801 gcctgatgtt taggccgcgc gacagccgcg atctgcgctt gctgcatacg ggtctcgcga
     1861 tcgagccggc cgcacaggtg cgcgggatcc acgacccttt cggcaattcg atcgccatcg
     1921 ccgccttcga gggcccgacc caggcgctgg aactcaccag caccatacgg ctggagcatt
     1981 tcggcctgcc gcccgaactg ccgccgatcg aggaatatgc ccgcaagctg cccttcgcct
     2041 atctcgccga ggaagcgccc gacctcacgc gttatgtcga gcgccactat cccgatccca
     2101 acgccgcgct gagcagctgg accaagcagt tcctggaggg cgaggaggga ggcgccgaca
     2161 ccttcgccac gctcacgcgc atgtgcaacg gcatccagga aacgctgaaa tacgccatgc
     2221 gctttgagcc cggcacccag ccgccggcga cgacgctgga gagcggcagc ggcacctgcc
     2281 gcgactacgc gctgctgatg atcgaaggcg cgcgcgcgtt cggcctggcg gcgcgcttca
     2341 tcaccggcta cctctacgat ccggcgctcg acgaggcggc cggcggcacg gcgaacccgg
     2401 cgttcgccca cgcctggatg gaagtctatc tgccgggcgc cggctgggtc gagttcgacc
     2461 cgaccaacgg catcatcggc agcgagcggc tgatccgcgt ggccgtcggc cgcgatcccg
     2521 aacaggccat gccgatcaag ggcactttca ccggcgccgc cgacgtggcg gtcaatacga
     2581 tggtcgacgt ccaggtcaag acgctcgcgc cgctggcggc agcggaagct cccgggccgg
     2641 caccggcacc ggcagcggcg cctcaagagc ccatcacgca atcgtaagca gccgcctgtg
     2701 ggctgccgtg ccagagttcg gtgtcgccag ggaggatgcc gatgaacccc gctcgcctgc
     2761 ttgctgcttg cctcgccgcc gttgttgcct tcgccgtcgc cgcggcggcc gtggcgcaaa
     2821 gcccgcccac gcggctgcgc ggatcgatcg cggccatcga cggcaagacc gcgaccatcg
     2881 ccacgcgcga aggctcgagc gtcaaggtga acctggccga caattgggtc gtcatgctgg
     2941 tgagcccgat gaccatggcc gatatcaagg aaaacagctt cgtcggcatc gcctcggcga
     3001 agggtccgga cggctccttg aacgccctcg aagtgctggt cttcccagag gcggcgcgcg
     3061 gcagcaacga aggccactat ccatgggacc tgcagcccga gagcatgatg accaacgcca
     3121 cggtggccac agtggcctcg gcgagcgacg gacagacgct gacgctgaaa tacaaggacg
     3181 gcacgcagac catcaaggtg aagcccggca cgccgatcgt caccttcgcg ccgggcgatc
     3241 gggcggacgc caaggtcgga gccaaggtgt tcttgggcgc caccaagggt gccgacggca
     3301 gcctgacggc cgcccgcctg ctggtcggca aggacgggct gacgccgccg atgtaggcgg
     3361 ctctagagcc gccagagcgt gacgccggcg ggaacggttg cgcgatcgag cagggcgggc
     3421 acatcggcca cgaagccttg cgaagatttc agcaacggct gcaccagatc ccagccaccg
     3481 tcgcgatagg cgcggtgggc gacggccagg acgacggcgt cggctggctt gagttcgccg
     3541 aacggcgtca gcgacaagcg gtattccgcc cgcagcagct caccgtcggc catcggatcg
     3601 tgaagctgca cggcgatgcc gaaatcggcg agttcgcgca cgatgtcgat cacgcgggtg
     3661 ttgcggatgt cgggcacgtt ctccttgaag gtgacgccca gcaccgtcac cagcggccgg
     3721 ccgttgcccg cactgcgcat gatgctgcgc gccacgcggt tggcgacata gaagcccatg
     3781 ccgtcgttga cccggcggcc ggaatggatg acctcggggt ggtagcccac cgactcggcc
     3841 ttatgagcga tgtagaaggg gtcgacgccg atgcagtggc cgccgaccag gccgggccgg
     3901 aacggcagga agttccactt ggtgccggcg gcctgcagga cgtcgcgggt atcgacgccc
     3961 agccggtcgc agatcagggc gacctcgttg atcagtgcga tgttgacgtc gcgctgggta
     4021 ttttccagca ccttggcgaa ctcggcgacc ctgatcgagg gcgcccgatg ggtgccggcg
     4081 cgcacggcgc tgcgatagac ggcatcgacg atctcgagcg tttcaggcgt gtcggccgac
     4141 acgaccttga ggatggtctc gaagcgccgc tcgcggtcgc ccgggttgat gcgctcgggc
     4201 gaatagccga cgttgaagtc ggtgcgccat ttcagcccgg aactttgctc gagcacggga
     4261 atgcagacgt cttcggtgac gccgggatag accgtcgatt cgtagaccac gatgtcgccc
     4321 ggcttgagga tgccgccgag ggtcgccgag gcctgcttga gcggctcgag gttcggctgc
     4381 ttgctgacat cgatcggtgt cggcacggtg acgatgtgga agtcggccaa ccgcagatcc
     4441 tcggcggtgc cggaaaagcg caggccatcc gccaagagcg ctgccttgcc gatttcgccg
     4501 gtgcggtcat ggccgtg
//
LOCUS       DASWGA010000811         2084 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2496728, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000811 DASWGA010000000
VERSION     DASWGA010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2496728"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..857)
                     /locus_tag="VF991_19020"
     CDS             complement(<1..857)
                     /locus_tag="VF991_19020"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558592.1"
                     /translation="MSGIDSAYAWRRLAASVTLSTVGGIGMWCLAVALPIVQVDLGVS
                     RADISFAYTMNMLGFFAGGVLAGRLVDRRGIVVTAILSAVGLSLGFALAPTTSSLALF
                     AAAQILIGFSAAATFAPLVADVSHWFEKRRGVAVAIAASGNYIAGAIWPPIVELMIRD
                     YGWRTTYLSAAALCLATMIPLALTLKRRPPDHAETQIAAVARRSQAALGLSPNALQAL
                     LAVAGIACCVAMSMPQVHIVAYCADLGYGVARGAEMLSLMLGFGIVSRVLTGWIADRV
                     GGVSTLLLGS"
     gene            complement(864..1808)
                     /locus_tag="VF991_19025"
     CDS             complement(864..1808)
                     /locus_tag="VF991_19025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX9558593.1"
                     /translation="MWQANERYPDSSVRVLDASFAKYRLALASVERLYTGCRWSEGPV
                     YFGDGRYLLWSDIPNNRVLRWDEETGVVSIFRKPSNNANGHTRDRRGRLIACEHDARR
                     VVRFEYDGAITVLADSYNGKPLNSPNDVVVKSDGSVWFTDPTFGILGYYEGHKAESEN
                     EPAVYRLDAATGKLTVMADDIPGPNGLAFSPDEKKLYVVASRAEPHRTIVSYDLSADG
                     MTLSNGKVLIDAGPGGSPDGFRVDVDGNLWCGWGMGSAELDGVRVFNPAGKPIGHIDL
                     PERAANLCFGGRHRNRLFIAASHSLYALYVNTQGVAGG"
     gene            complement(1825..>2084)
                     /locus_tag="VF991_19030"
     CDS             complement(1825..>2084)
                     /locus_tag="VF991_19030"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9558594.1"
                     /translation="KRFAASFTAASAPFLILHGKSDAIVGVLAAQRLDAIATKAGAPH
                     QLVIYPDAGHRFERDFSAVGNQAAAHDAWQRTAAFFKTYLQ"
BASE COUNT          362 a          677 c          741 g          304 t
ORIGIN      
        1 gagcccagca gcagcgtgct gacgccgccg acccggtcgg cgatccagcc ggtcagcacg
       61 cggctcacga tgccgaagcc cagcatcagc gacagcatct ccgcgccgcg cgccacgccg
      121 tagccgagat cggcgcagta ggcgacgata tggacctgcg gcatcgacat ggcgacgcag
      181 caggcgatgc cggccaccgc caagagcgcc tgcagcgcat tgggcgacag gccgagtgct
      241 gcctgcgagc ggcgcgcgac ggcggcgatc tgcgtctccg cgtggtccgg cggccggcgt
      301 ttcagcgtca gcgccagcgg gatcatcgtc gccaggcaca aagcggcggc tgaaagatag
      361 gtcgtccgcc agccgtagtc gcggatcatc agctcgacga tgggcggcca gatggcgccg
      421 gcgatgtagt tgcccgaggc ggcgatggcg acggcgacgc cgcggcgctt ctcgaaccag
      481 tgcgagacgt cggcgaccag cggcgcgaag gtggcggcgg cgctgaagcc gatcaggatc
      541 tgggcggcgg cgaacagcgc caacgaggag gtggtgggcg cgagcgcgaa gcccagcgac
      601 agtccgacgg cgctcaggat cgcggtgacg acgatgccgc gccggtcgac cagccggccg
      661 gccaggacac cgcccgcgaa gaagcccagc atgttcatgg tgtaagcgaa ggagatgtcg
      721 gcgcggctga cgccgagatc gacctggacg atgggcagcg ccaccgcgag gcaccacatg
      781 ccgatgccgc ccaccgtgct caaggtcacg ctggcggcca gccgccgcca ggcgtacgcc
      841 gaatcgatac ccgacattta tgatcagccg ccggccacgc cctgcgtgtt gacgtagagc
      901 gcgtagagcg aatggcttgc cgcgatgaac agccggttgc gatggcggcc gccgaaacag
      961 aggttggcgg cacgttccgg caggtcgatg tggccgatcg gcttgcccgc cggattgaac
     1021 acgcgcacgc cgtcgagctc ggccgaaccc atgccccagc cgcaccacag attgccgtcg
     1081 acatcgaccc ggaagccgtc gggtgagccg cccggcccgg catcgatcag caccttgccg
     1141 ttgctcaatg tcatgccgtc ggcgctgaga tcgtaggaca cgatggtgcg atgcggctcg
     1201 gcgcgcgagg ccacgacata gagcttcttc tcgtcgggcg agaaggccag cccgttggga
     1261 ccggggatgt cgtcggccat caccgtgagc ttgccggtcg cggcgtcgag gcgatagacc
     1321 gcgggctcgt tctcgctctc ggccttgtgg ccctcgtagt agcccaggat gccgaaggtc
     1381 ggatcggtga accacaccga accgtccgat ttcaccacga cgtcgttggg cgagttcaag
     1441 ggcttgccgt tgtaggaatc ggccagcacc gtgatcgcgc cgtcatactc gaagcgcacg
     1501 acgcggcgcg catcgtgctc gcaggcgatc agccggccgc ggcggtcgcg ggtatggcca
     1561 ttggcattgt tcgacggctt gcggaagatc gagaccacgc cggtctcctc gtcccagcgc
     1621 agcacgcggt tgttgggaat gtcgctccac aagagatagc ggccgtcgcc gaagtagacc
     1681 ggcccctcgg accagcggca ccccgtgtag agccgctcca cggaggcaag cgccagccga
     1741 tatttggcga acgacgcgtc gagcacgcgt acggaagaat cgggatagcg ctcgttggct
     1801 tgccacattt tgatttcctc gttgctattg caggtaggtc ttgaagaacg ccgctgtgcg
     1861 ctgccaggca tcgtgggcgg ccgcctggtt gccgacggcc gagaagtcgc gctcgaagcg
     1921 gtggccggcg tcggggtaga tcacaagttg atgcggcgcg ccggccttgg tggcaatggc
     1981 gtcgagccgc tgggcggcga gcacgcccac gatcgcgtcg ctcttgccat gcaggatcag
     2041 gaacggcgcg ctggcggcgg tgaagctcgc ggcaaaccgc ttga
//
LOCUS       DASWGA010000812         1633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_466105, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000812 DASWGA010000000
VERSION     DASWGA010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466105"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..>1633
                     /locus_tag="VF991_19035"
     CDS             3..>1633
                     /locus_tag="VF991_19035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9558595.1"
                     /translation="MNLPGQAHAVMVRSPVAHGVLKGIDTRAASAMPGVLEILTHADL
                     EAAGFGPLKCPLNIPQRDGSPMKTPPRPSLAKGRVRFVGEAVACVVAETAVQAKDAAE
                     AVELDIEELPAVTTPADALKEGAPQIHAEAPGNLALDFHYGDAEAVKKAFAEAAHVTR
                     LEIVSNRIIVNPMEPRSAIGSYDPKTERFTLHVGCQGVIGLRGGLARDVLKMPADKVR
                     VLTGNVGGSFGMKSQVYPEYGPLLLASKRLGRPVKWTDERSESFLSDHHGRDHQRVAE
                     LALDKDGRFLAVRLSGTGNAGAYIYPPMPATTNAVKNVIDVYKTPAMEVNSKVVFTNT
                     TPIGAYRGAGRPEGNYYMERLIDTAAREMGIDRVELRRLNHIAPGQMPYKAPSGMNYD
                     SGEFTTVLDKALLAADWQGFDKRKAESKARNKLRGRGIGSYLEVTGPPAKEYGGIRFE
                     EDGKITMLSGTLDYGQGHATPFAQVLSDKLGVPFERFQLLQGDSDQLKVGGGTGGSKS
                     ALVASQAFLEAGDKLIEQGKQIAAHVLEASAVDIE"
BASE COUNT          301 a          556 c          543 g          233 t
ORIGIN      
        1 acatcaacct accgggccag gcgcatgccg tgatggtgcg cagtccggtg gcgcacggtg
       61 tcctgaaagg catcgacacc agagcggcat ccgccatgcc gggcgtgctc gagatcctga
      121 cccatgccga tctcgaagcg gcgggtttcg ggccgctgaa atgcccactc aacataccgc
      181 agcgcgacgg ctcgccgatg aagacgccgc ccaggccttc gctcgccaag ggccgcgtcc
      241 gtttcgtcgg cgaggcggtg gcctgcgtcg tcgccgagac cgccgtgcag gccaaggatg
      301 ccgccgaggc cgtcgagctc gacatcgagg agctgcccgc cgtcaccacg ccggccgatg
      361 ccctgaaaga gggcgcaccg cagatccatg ccgaggcgcc gggcaacctg gcgctcgact
      421 tccattacgg cgacgccgaa gcggtgaaga aggccttcgc cgaggccgcg cacgtcaccc
      481 ggctcgagat cgtttccaac cgcatcatcg tcaacccgat ggagccgcgc tcggcgatcg
      541 gctcctacga tcccaagacc gagcgtttta ccctgcatgt cggctgccag ggcgtgatcg
      601 gcctgcgcgg cgggctcgcc agggacgtgc tgaaaatgcc ggccgacaag gtgcgcgtgc
      661 tgaccggcaa tgtcggcggc tcgttcggca tgaagtcgca ggtctatccc gagtacggcc
      721 cgcttttgct ggccagcaag cggcttggcc ggccggtgaa atggaccgac gagcgctccg
      781 aaagcttttt gagcgaccat cacggccgcg atcaccagcg cgtggccgag ctggcgctcg
      841 acaaggacgg caggtttttg gccgtgcggc tcagcggcac cggcaacgcc ggcgcctaca
      901 tctatccgcc gatgcccgcg accaccaacg cggtgaaaaa cgtcatcgac gtctacaaga
      961 caccggcgat ggaggtgaac tccaaggtgg tgttcaccaa caccacgccg atcggcgcct
     1021 atcgcggcgc cggccgcccc gagggcaact actacatgga gcgcctgatc gacacggcgg
     1081 cgcgcgagat gggcatcgac cgggtcgagc tgcggcgact gaaccacatc gcgcccgggc
     1141 agatgccgta caaggcgccg tcgggcatga actacgattc gggcgagttc accaccgtgc
     1201 tcgacaaggc gcttttagcc gccgactggc agggcttcga caagcgcaag gccgagagca
     1261 aggcccgcaa caagctgcgc ggccgcggca tcggctccta cctcgaggtc acaggaccgc
     1321 cggccaagga gtatggcggc atccgcttcg aagaagacgg caagatcacc atgctgagcg
     1381 gcacgctcga ttacgggcag ggccacgcca cgcccttcgc ccaggtgctg agcgacaagc
     1441 tcggcgtccc gttcgagcgc tttcagctgc tgcagggcga ttccgaccag ctcaaggtgg
     1501 gcggcggcac cggcggctcg aagtcggcgc tggtcgccag ccaggccttc ctcgaggccg
     1561 gcgacaagct gatcgagcag ggcaagcaga tcgcggccca cgtgctcgag gcgtcggccg
     1621 tggacatcga att
//
LOCUS       DASWGA010000813         7082 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1487222, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000813 DASWGA010000000
VERSION     DASWGA010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7082
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1487222"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1497)
                     /locus_tag="VF991_19040"
     CDS             complement(<1..1497)
                     /locus_tag="VF991_19040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX9558596.1"
                     /translation="MPDRDDRGSAWKVPPSRYLAGRPAEHRVGTPRSLYVTMPDGCRL
                     AVDIHLPDGDGGKRWPTVLILTPYVRRFEVAAGSNVEPSPNSYKYRDMFVPRGYAVVV
                     VDARGTGASFGTRDSFRSPRERDDYRAIADWITAQPWSDGRIGATGISYLGAACDFLA
                     STGHKAVKAIAPLFAVWDTWADNYYPGGLLIKRLALVYDELMLALDHDRRDLRAQFSY
                     FAHPALHGPMPVDDDKDGVLAREAVKGHLANFRMPDFITEFKFRDDPLPYDPSFTSAS
                     FSPYNYLDEIPQDVAVYAISGWMDGAGYANGTLSRFLTLPNAERRIMLGPWDHGARVN
                     ASPWRSRVEPELPVLGEVLRFFDQHLAGRATGLGDEDPIHYFTVHAEEWRSAKQWPPV
                     KGSRQFFTAPGHQLASARPNDGTSEPYQADFTVGSGSQTRYERIAGIEATSYYADWSE
                     RERRLPGFTSEPLDQPFEIAGHPVVSLWLASSEPDAAIFIYLSEVEADG"
     gene            1551..2549
                     /locus_tag="VF991_19045"
     CDS             1551..2549
                     /locus_tag="VF991_19045"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558597.1"
                     /translation="MTNKNTLSRRHTLALAGSAFAAPMIASGIARAADDWPAKPVRYI
                     NSFPAGGPTDVLSRIACQKLGEMTGQQFIVENKGGSGGNVGAEAIAHATPDGYTIGLY
                     SVASHAIAPSLYDKLPFNAGKDFTAVSMLWSLPNLLIVRPGVPAKTVPELIALARANP
                     GKYSFASSGSGTTVHLSGELFKVMAKIDLLHVPYRGSAPAIQDLLAGQVDMIFDNIPG
                     SLAQMRGGKAVGLAVTSLKRSPAAPEIAAMAEFLPGFDVNSWGGICGPAGLPPAVVEK
                     LSALCQKALESSDLKTAYLKQGATPMWLDPIDTAAYRAADEKRLAPVIKASGAKVD"
     gene            2744..3265
                     /locus_tag="VF991_19050"
     CDS             2744..3265
                     /locus_tag="VF991_19050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558598.1"
                     /translation="MIRSVSLAALLSLALAGAQAVQAQQWIDHRPNGGGYRVAFPAQP
                     IEDGRNVDTTLGAVKMRTTAVEIDGRIFMTIDSVYPSNLPMGDPEGDLDIVRDGGVRN
                     VNGKLLSEERLSIGNAPARRVVIDIPHSNQAAEALIVLDDHRLFQAVYVGPRGTQSTE
                     EAKRFLSSFALER"
     gene            3335..4330
                     /locus_tag="VF991_19055"
     CDS             3335..4330
                     /locus_tag="VF991_19055"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558599.1"
                     /translation="MLRVVLPRRRALAALGGALATPMIASGLARAQNDWPNKSVRYIN
                     LFPAGGATDVLSRVVCQELSELTGQQFIVENKGGSGGNVGADAIAKSAPDGYTVGLLS
                     IASHAISPTLYARLPFDADKDFTPISMLWSVPNLLVVKLDIPATTVPELIELVRANPG
                     KYSFASGGSGTSPHICGEMLKQRTHIDMFHVPYRGGAPALQDMLAGQVDMMFDNIPGP
                     LAQVKAGKLRPLAVTSVERSPIAPDVPTMSEYLPGFQITSWGGLCGPAGLPPAMVEKA
                     AALTKKALASNALKTAFLAQGATPMWMSPADTAAFRRSEEKQLAPVIRASGAKVD"
     gene            complement(4454..5890)
                     /locus_tag="VF991_19060"
     CDS             complement(4454..5890)
                     /locus_tag="VF991_19060"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX9558600.1"
                     /translation="MTYSDVSLMIDGAWTKGASGRTIPVVNPATEEVIGQVAHAETSD
                     LDRALAAADKGFKQWRKVSAYERYKIMRKAADLMRQRLDEICTIMTTEQGKPLFEAKV
                     ETNLAADIIDWMAEEGRRTYGRIVPARADNVYQLVTKEPVGPVAAFTPWNFPINQVVR
                     KASAALATGCSIIIKGPEDTPASCAQLVKAFVDAGVPAGVIQLVYGVPSEISEYLIPH
                     PVIRKVTFTGSTPVGKQLAALAGAHMKRVTMELGGHAPAIVFEDADLEQAVNVLGANK
                     FRNAGQVCVAPTRFLVHEKVYPEFVERFTAYAKNLKVGNGLEADTKMGPLVAERRLHA
                     MDTFVSDAIAKGAQVKTGGQRKGNKGYFYEPTVLTDVPLSARIMNEEPFGPLAPISPF
                     KDFDGVVKEANRLAWGLAAYAYTKNTKTAAAIGAAFESGMVSINHHGLALPEVPFGGV
                     KDSGYGSEGGLEALEAYLNTKFVSQLGM"
     gene            complement(5903..6784)
                     /gene="uraD"
                     /locus_tag="VF991_19065"
     CDS             complement(5903..6784)
                     /gene="uraD"
                     /locus_tag="VF991_19065"
                     /EC_number="4.1.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline
                     decarboxylase"
                     /protein_id="HEX9558601.1"
                     /translation="MPLTLDQLNRMSAAEFAACLGDTFERAPWVAEAASTRRPFATVT
                     ALHEAMIGALRAASRERQLDFLRGHPDLAGKAARAGALTHDSKSEQASVGLDSLSEDE
                     FARFHRLNDAYKAKFGFPFMISVRRHTRDSILAQFERRAGNDVASEFAAALQEVFFIT
                     RLRIAGKVSGDGMPQVIGRLSTHVLDTHAGRPAAGIAIDLYEFAGERAHRIATAVTNS
                     DGRTDQPLIGGRPLPIGRYELRFAVGNHFRSRGIDVGDPPFLDIVPLRFSIAEPEGHY
                     HVPLLCTPWSYSTYRGS"
     gene            6852..>7082
                     /locus_tag="VF991_19070"
     CDS             6852..>7082
                     /locus_tag="VF991_19070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558602.1"
                     /translation="MTQHITFTRRRLGTAALAGATLIGAPLPLRQAAAQAPANLKVGL
                     LLPTSGLQAQIGQACRRGADVANDVFADMKMAV"
BASE COUNT         1166 a         2388 c         2355 g         1173 t
ORIGIN      
        1 gccgtcggcc tcgacctcgg agagatagat gaagatcgcc gcatcgggct cgctcgaggc
       61 gagccacagc gacaccaccg gatggccggc gatctcgaag ggctgatcca gcggctcgct
      121 ggtgaagccg ggcagccggc gctcgcgctc gctccaatcg gcgtagtacg acgtggcctc
      181 gatgccggcg atgcgctcgt agcgcgtctg cgaaccgctg cccaccgtga agtcggcctg
      241 gtacggctcc gacgtgccgt cgttgggccg cgccgatgcg agctgatggc cgggcgcggt
      301 gaagaactgc cggctgccct ttaccggcgg ccattgcttg gccgagcgcc attcctcggc
      361 gtgcacggtg aagtagtgga tcggatcctc gtcgccaaga ccggtcgcgc ggccggcgag
      421 atgctggtcg aagaagcgca gcacttcacc cagcaccggc agctcgggct cgacgcgcga
      481 gcgccacggc gaggcgttga cccgcgcgcc gtggtcccac ggccccagca tgatcctgcg
      541 ctcggcattg ggcagcgtca ggaagcgcga cagcgtgccg ttggcgtagc ccgcgccgtc
      601 catccagccg gagatggcgt agaccgccac gtcctgaggg atctcgtcga gatagttgta
      661 gggactgaac gaggcgctgg tgaacgacgg atcgtaaggc agcggatcgt cgcggaattt
      721 gaactcggtg atgaagtcgg gcatgcggaa gttcgcgaga tggcccttga ccgcttcgcg
      781 ggcgagcacg ccatccttgt cgtcgtcgac cggcatcggc ccgtgcagcg ccggatgggc
      841 gaagtagctg aactgggcgc gcagatcgcg ccggtcgtga tcgagcgcca gcatcagctc
      901 gtcgtagacc agcgccagcc gcttgatcag cagcccaccg ggataatagt tgtcggccca
      961 ggtgtcccac accgcgaaca agggcgcgat cgccttgacc gccttgtggc cggtgctggc
     1021 gaggaagtcg caggccgccc ccaggtagga gatgccggtg gcgccgatcc tgccgtcgct
     1081 ccacggctgg gcggtgatcc agtcggcgat ggcgcggtag tcgtcgcgct cgcgcgggct
     1141 gcggaaggaa tcgcgcgtgc cgaagctcgc acccgtgccg cgcgcatcga ccacgaccac
     1201 ggcatagccg cgcggcacga acatgtcgcg atacttataa ctgttgggcg acggctcgac
     1261 gttgctgccg gccgccacct cgaagcggcg cacatagggc gtcaggatga gcacggtggg
     1321 ccagcgcttg ccgccatcgc cgtccggcag gtggatgtcg accgccaagc ggcagccgtc
     1381 gggcatggtc acatagaggg agcgcggcgt gccgacgcga tgctcggccg gccggccggc
     1441 aaggtagcgg ctgggcggca ctttccaggc cgaccctcgg tcgtcgcgat ccggcatggt
     1501 cggtcctttc cgatctggca attgccgcca tcctcaccat gtaccctgtc atgacgaaca
     1561 agaacaccct ctcccgccgc cacacgctcg cgctcgcagg cagcgcgttt gccgcaccta
     1621 tgatcgcctc cggcatcgcc cgcgccgccg acgactggcc tgccaagccg gtgcgctaca
     1681 tcaactcctt cccggccggc gggccgaccg acgtgctctc gcgcatcgcc tgccagaagc
     1741 tcggcgagat gacgggccag cagttcatcg tcgagaacaa gggcggctcg ggcggcaatg
     1801 tcggcgccga ggcgatcgcc catgccacgc ccgacggcta cacgatcggc ctctacagcg
     1861 tcgccagcca cgccatcgcg ccctcgctct acgacaagct gccgttcaac gccggcaagg
     1921 actttaccgc cgtcagcatg ctgtggtcgc tgcccaacct cctgatcgtg cggccgggcg
     1981 tgcccgccaa aaccgtgccg gagctgatcg cgctcgcgcg ggccaatccc ggcaagtatt
     2041 ccttcgcctc gtccggctcg ggcacgaccg ttcatctgag cggcgagctc ttcaaggtca
     2101 tggccaagat cgacctttta cacgtgccct accgcggcag cgcgccggcg atccaggacc
     2161 tgctggcggg ccaggtcgac atgatcttcg acaacatccc gggctcgctc gcccagatgc
     2221 gcggcggcaa ggcggtcggg cttgccgtca cgtcgctgaa gcgcagcccg gcggcgccgg
     2281 agattgccgc catggccgag ttcctgccgg gcttcgacgt caattcgtgg ggcggcatct
     2341 gcgggcccgc cggcctgccg ccggccgtgg tcgagaagct ctcggcgctg tgccagaaag
     2401 cgctggagag cagcgacctc aagacggcct acctcaagca gggtgcgacg ccgatgtggc
     2461 tcgacccgat cgacaccgcc gcctaccgcg ccgccgacga aaaacgcctg gcgccggtaa
     2521 tcaaggcctc cggcgccaag gtggattgat cgcgccagcg atcaatccac cctgagcgct
     2581 catattcctc tcccccgcta gggggagagg ttaggtgagg gggttgcacg agctgtcgaa
     2641 gccgcctcac ccgtcctctc cccctagcgg gggagaggag tctgaaggca acctccgaga
     2701 gggcggcagc gtttctggga tagatcagcc acaggagcag gccatgatcc ggtcggtttc
     2761 gcttgccgcg ctgctctccc tggcgctcgc cggcgcgcaa gccgtacaag ctcaacaatg
     2821 gatcgatcac cgcccgaacg gcggcggcta tcgcgtggcg tttcccgccc agccgatcga
     2881 agacggccgc aacgtcgaca cgaccctcgg cgcggtcaag atgcggacca cggcggtcga
     2941 aatcgacggc aggatcttca tgaccatcga ttcggtctat ccctccaatc tgccgatggg
     3001 cgatcctgag ggcgacctcg acatcgttcg cgacggcggc gtgcgcaacg tcaacggcaa
     3061 gctgctgtcg gaagagcggc tgagcatcgg caatgcgccg gctcgccgcg tggtgatcga
     3121 catcccgcac agcaaccagg cagccgaggc cttgatcgtg ctggacgacc atcgtctctt
     3181 tcaggcggtc tatgtcggtc cgcgcggcac ccagagcacg gaagaagcca agcgcttcct
     3241 gtcgtcgttc gcgctggagc gctaattccc tccccatcga tcggcgtgcc ggtataagat
     3301 accgcctata aaaaagtaaa tgggaggtac cggcatgctc agggtggtct tgccccgtcg
     3361 tcgcgcgctc gccgccttgg gcggcgcgct ggccacgccg atgatcgcct cgggtctggc
     3421 gcgggcgcaa aacgactggc ccaacaaatc ggtgcgctat atcaacctgt tcccggccgg
     3481 cggtgcgacc gacgtgctct cgcgcgtcgt ctgccaggag ctgagcgagc tcaccggcca
     3541 gcagttcatc gtcgagaaca agggcggctc gggcggcaat gtcggcgccg acgcgatcgc
     3601 caagtcggcg cccgacggct acacggtcgg gcttttgagc atcgcctcgc acgccatttc
     3661 gccgacgctc tacgcccggc tgccgttcga tgccgacaag gacttcacac ccatcagcat
     3721 gctgtggtcg gtgcccaacc tcctggtcgt gaagctcgac attccggcca cgacggttcc
     3781 ggaattgatc gaattggtca gggcaaatcc cggcaagtat tccttcgcgt ccggcggctc
     3841 gggcaccagt ccccatatct gcggcgagat gctgaaacag cgcacccaca tcgacatgtt
     3901 ccacgtgccc tatcgcggcg gcgcgccggc gttgcaggac atgctggcag gtcaggtcga
     3961 catgatgttc gacaacatcc ctgggccgct cgcccaggtg aaggccggca agttgcggcc
     4021 gcttgccgtg acgtccgtcg aacgcagccc gatcgcaccg gatgtgccca ccatgtcgga
     4081 gtatctgccg ggctttcaga tcacctcatg gggcggcctt tgcgggccgg ccggcctgcc
     4141 gccggccatg gtggaaaaag ccgcggcgct caccaagaag gcgctggcga gcaacgcgct
     4201 gaagaccgcg ttcctcgctc agggcgcgac accgatgtgg atgagcccgg ccgacaccgc
     4261 cgcgtttcgc cgatccgagg agaaacagct ggccccggtg atcagggcgt cgggcgccaa
     4321 agtcgattga gcttcttgtc gtcctgagcg taagcgaagg acctcatcgc cgcttgccac
     4381 cggcaagaga tccttcgctt cgcttcagcg cggggattac cccgcgcgcg atgacaggcg
     4441 gcgttgccgc ctgtcacatc ccgagctggc tcacgaactt ggtgttgagg taggcctcga
     4501 gcgcctccag gccgccctcc gagccgtagc ctgaatcctt gacgccgccg aacggcactt
     4561 ccggcagggc gaggccatgg tggttgatcg acaccatgcc gctttcgaac gccgcaccga
     4621 tcgccgccgc ggtcttggtg tttttggtgt aggcgtaggc ggcgagtccc caggccaggc
     4681 gattggcctc cttcaccacg ccgtcgaaat ccttgaacgg gcttataggc gccagcgggc
     4741 cgaacggctc ctcgttcatg atcctggcgc taagcggcac gtcggtcagc acagtgggct
     4801 cgtagaagta gcccttgttg cctttgcgct gcccgccggt cttgacctgg gcgcccttgg
     4861 cgatggcgtc gctgacgaac gtatccatgg catgcaggcg gcgttcggcc accagcggac
     4921 ccatcttggt gtcggcttcg agcccgttgc cgaccttcag gttcttggcg taggcggtga
     4981 agcgctcgac gaactcggga tagaccttct cgtggaccag gaagcgcgtc ggcgcgacgc
     5041 agacctggcc ggcgttgcgg aacttgttgg cgccgaggac attcaccgcc tgctcgagat
     5101 cggcgtcctc gaacacgatg gccggcgcgt ggccgcccag ctccatggtc acgcgcttca
     5161 tgtgcgcgcc ggccagtgcg gcgagctgct tgccgaccgg cgtcgagccg gtgaaggtga
     5221 ccttcctgat gacgggatgg gggatcaggt actcgctgat ctccgacggc acgccataga
     5281 ccagctggat cacgcccgcc ggcacgccgg catcgacgaa cgccttgacg agctgggcac
     5341 acgaggcggg cgtgtcctcc ggtcccttga tgatgatcga gcagccggtc gccagcgccg
     5401 ccgaggcctt gcgcacgacc tggttgatcg ggaagttcca cggcgtgaaa gccgcgaccg
     5461 ggccgaccgg ctccttggtc acgagctggt acacgttgtc ggcgcgcgcc ggcacgatgc
     5521 ggccgtaggt gcggcggcct tcctcggcca tccagtcgat gatgtcggcg gcgaggttgg
     5581 tctcgacctt ggcctcgaac aggggcttgc cctgctccgt ggtcatgatc gtgcagatct
     5641 cgtcgaggcg ttggcgcatc aggtcggccg ccttgcgcat gatcttgtag cgctcatagg
     5701 ccgagacctt gcgccactgt ttgaatccct tgtcggcggc ggcgagcgcg cggtcgagat
     5761 cgctcgtctc ggcatgcgcc acctggccga tcacttcctc ggtcgccgga ttgacgaccg
     5821 gaatggtgcg accgctggcg cccttggtcc aggcgccgtc gatcatcagg gagacgtcgc
     5881 tgtaggtcat ttcttcctcc tcttaacttc cgcgataggt cgaatagctc cagggcgtgc
     5941 agagcaatgg gacgtgataa tgcccctccg gctcggcaat ggaaaagcgc aaaggcacga
     6001 tgtcgagaaa cggcggatcg ccaacatcga tacccctgct gcgaaaatgg ttgcccacgg
     6061 caaagcgcaa ttcatagcgg ccgatcggca acggccggcc gccgatcagc ggctggtcgg
     6121 tgcgtccgtc cgaattggtg accgccgtcg cgatgcggtg ggcgcgttcg cccgcgaact
     6181 cgtacaggtc gatcgcaatt cccgccgccg gccggccggc atgggtgtcg agcacatggg
     6241 tgctgaggcg gccgatgacc tgcggcatgc cgtctcccga aaccttgccg gcgatcctga
     6301 gccgcgtgat gaaaaagacc tcctgcaggg cggccgcgaa ctcgctggcc acgtcgttgc
     6361 cggctcgccg ctcgaactgc gccaggatcg aatcacgggt gtggcggcgc acggagatca
     6421 tgaaaggaaa accgaacttc gccttgtagg cgtcgttcag gcgatggaag cgcgcgaact
     6481 cgtcctcgct caagctgtcg aggccgacgc tggcctgctc gcttttggaa tcgtgggtca
     6541 gcgcgccggc gcgggcagcc ttgccggcaa gatcgggatg gccgcgcagg aagtcgagtt
     6601 gccgctcgcg ggaggcggca cgcagcgcgc cgatcatggc ctcgtgcaag gccgtcaccg
     6661 tggcgaaggg ccgcctggtc gacgccgcct cggccaccca gggcgcccgt tcgaaggtat
     6721 cgccgagaca agcggcgaat tccgcagcgc tcatccgatt gagctggtcg agtgtgagcg
     6781 gcatgccggc cgacctagca cggcctgccg gccgtctcta tagtccggcc agaaaatcag
     6841 ggagactcgc aatgacccaa cacatcacct tcacccgccg ccgcctcggc acggcagctc
     6901 tcgcgggcgc caccctgatc ggggcgccgc tgccgctgcg ccaggccgcg gcgcaggcgc
     6961 cggccaacct caaggtcggc ctgctgctgc cgacctcggg cctgcaggcg cagatcggcc
     7021 aggcctgccg gcgcggcgcc gacgtcgcca acgacgtgtt cgccgacatg aagatggccg
     7081 tg
//
LOCUS       DASWGA010000814         4703 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_337187, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000814 DASWGA010000000
VERSION     DASWGA010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4703
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337187"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VF991_19075"
     CDS             complement(<1..189)
                     /locus_tag="VF991_19075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020479358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin"
                     /protein_id="HEX9558603.1"
                     /translation="MTKYLVLLPLLLATAACGDTWGQRAVTGGGIGAGSGALIGAVTP
                     LGVLPGALVGGAVGAGVGA"
     gene            complement(201..410)
                     /locus_tag="VF991_19080"
     CDS             complement(201..410)
                     /locus_tag="VF991_19080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558604.1"
                     /translation="MAKYVVLAAILLGTVACGDTWGQRAVTGGGIGAGSGALIGALTP
                     LGVLPGLLVGGAVGAGVGAATTPQR"
     gene            523..819
                     /locus_tag="VF991_19085"
     CDS             523..819
                     /locus_tag="VF991_19085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558605.1"
                     /translation="MSNDTEVWLLFAPFWLLGIAALVGAIWHMAHAALHIRRAQAAGH
                     VRKTSLFSKRLAWHELTDAGRHHLKRALIAFAAFWVLCLLGVGVGAAVGLLLGR"
     gene            complement(1029..1622)
                     /locus_tag="VF991_19090"
     CDS             complement(1029..1622)
                     /locus_tag="VF991_19090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX9558606.1"
                     /translation="MLIQVVHCHPLTESYDHALFRTIVQTLEQNGHRVVATDLYREGF
                     DPTMTVEERRTYMSNDYDHRAVAPYVDILKKADGVILCFPHWWFSMPAMLKGWVDRVW
                     GPGVAFTYDPKDGHLAPNLKNIRLFGVVTSYGSPWWIVRIFAGDAGRMVLMRGMKPLC
                     ARDARSFYLAHYGMDSSTPRSRQAFLDKVRRTVAAVA"
     gene            complement(1671..2453)
                     /locus_tag="VF991_19095"
     CDS             complement(1671..2453)
                     /locus_tag="VF991_19095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9558607.1"
                     /translation="MNGKPELQGKRALVTGGTKGIGEAVVATLREAGAIVLTTARSRP
                     QTLDNADQFVTADVSTAEGCIAVAQAVHDRLGGVDIIVHVVGGSSAPAGGFAALDDSQ
                     WNDALNQNLLAAVRLDRALLPSMVAQGAGVIIHITSIQRQLPLPEATLAYAAAKAALS
                     TYSKGLSKEVSPRGVRVVRVSPGWVETAGAVGLVEEIARRNATDYEGARKIVMASLGG
                     IPLGRPAKPREVADLVAFLASPRAAAITGAEYVIDGGTVPTA"
     gene            2513..2914
                     /locus_tag="VF991_19100"
     CDS             2513..2914
                     /locus_tag="VF991_19100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006204841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9558608.1"
                     /translation="MTRTHEKVGYPPAGKARQYTPATAASGVEQAFKVLEGRWKLVIL
                     FHLFGGKTLRFSELERAIPAISQKMLTQQLRQLEKDGMVRRTIHPEVPPRVEYRLTAW
                     GQALCPALDALLEWTAGREVYTGAQLKTGVP"
     gene            2911..4578
                     /locus_tag="VF991_19105"
     CDS             2911..4578
                     /locus_tag="VF991_19105"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9558609.1"
                     /translation="MTITAEVPRTREATGVGARPEPIERWEVVVIGAGLAGMYQLLRL
                     RELGFKARVYEAGHGVGGTWYWNRYPGARFDSESWTYGFSFSDELLGEWDWKEHFSGQ
                     PENLRYCNFIADKFDLRRDITFGARARSACWDEADKEWEVAFEDGRRARARFLITAIG
                     PLSAPTMPLIAGVEDFKGEAYHTGLWPHEPVSFAGKRVAVIGTGASGVQAITEIAKTV
                     GHMTVFQRTPNWCAPLRNGPIDAEAMGKIRANYTDIFARCRETYGCFIHAADPRNATE
                     VSADEREAFYEKLYNQPGFAFWQGNFRDSLVDKAANDTMTAFVTRKIRARVKDHKVAD
                     KLIPTNHGFGTRRVPLESGYYEVYNQPNVELIDLRETPIERITEKGIRTSDGERAFDM
                     IIFATGFDAITGSFDRIDIRGRGGQRLKDKWADGPQTYLGLNVEGFPNMLTLVGPHNA
                     ATFCNLPRCIEQNVEWVSDLLAYMRDRRLTRVEATEAAERDWTAHVHETAARLLLTQV
                     DSWMTGVNKNVAGRHKRTFMAYAGGAPKYRQKCDEVVAQGYDGFTLA"
BASE COUNT          830 a         1558 c         1560 g          755 t
ORIGIN      
        1 cgcacccacg ccggcgccga ccgcgccgcc caccagagcg ccgggcagca cgccgagtgg
       61 cgtcaccgcg ccgatcaggg cgcccgaacc ggcgccgatg ccgccgccgg tgacggcgcg
      121 ctggccccag gtgtcgccgc aggccgccgt ggcaagcagc agagggagga gcacgagata
      181 cttggtcatg gcggggccgc tcagcgctgc ggcgtcgtgg ccgcgccgac gccggcgccg
      241 accgcgccgc cgaccagcag gcctggcagg acgccgagcg gtgtcagggc accgatcaag
      301 gcgcccgagc ccgcgccaat gccaccgccg gtcacggccc gctggcccca agtgtcgccg
      361 caggcgacgg tacccagcag aatggccgcc aaaaccacat atttcgccat gtgaatcccc
      421 gtttgcaaaa cttcgtcccc gtattacggg aatgagcgac ctttcgtgct gtggccaact
      481 tgtgaccgga ggggaaacgt tgacgttggt gggagggttg cagtgagcaa cgacacggaa
      541 gtctggctgc tgttcgcccc tttctggctg ctcggcatcg ccgctttggt cggcgcgatc
      601 tggcatatgg cgcatgccgc cctgcacatc cggcgcgccc aagcggccgg ccatgtgcgc
      661 aaaacgtcgt tgttttccaa gaggttggcc tggcacgagc tgaccgacgc cggtcgccat
      721 catctcaagc gggcgctgat tgcctttgcg gctttctggg tcctctgtct tttgggcgtc
      781 ggagtaggtg cggccgttgg gctgttgctg ggtcgctagg cgggtcgatc tcgcctactc
      841 ggcgaccagg gcgacgacct cgtagtcccc cgccgagggc ttggcgacca ggacctcttg
      901 ctcgcaggcg cttagcgccg cggccagaag tcccaatgtc ataaatagcg cccgccacat
      961 gacggcctcc ctcccctgag caacgtcggg ctggcttggg ggttgcaggg cgactgactt
     1021 tctttgcctc aggcgacggc ggcgacggtg cgccggacct tgtccaggaa agcctgccgc
     1081 gagcgcggcg tggagctgtc catgccgtaa tgggcgagat agaacgagcg cgcgtcgcgg
     1141 gcgcacaacg gtttcatgcc gcgcatcagc accatgcggc cggcgtcgcc ggcgaagatg
     1201 cgcacgatcc accatggcga gccgtagctc gtcaccacgc cgaacagccg gatattttta
     1261 agattgggtg cgaggtggcc gtccttggga tcgtaggtga aggccacgcc cggcccccac
     1321 acgcggtcga cccagccctt gagcatggcc ggcatggaaa accaccagtg cggaaagcac
     1381 agaatgacgc cgtcggcctt cttcaggatg tcgacataag gcgcgaccgc gcgatggtcg
     1441 tagtcgttgc tcatataggt gcgccgctct tcgaccgtca tcgtcggatc gaagccctcg
     1501 cgatagaggt cggttgccac gacccgatgt ccgttctgct cgagcgtttg cacgatggtg
     1561 cgaaacagcg cgtggtcgta gctctcagtc aggggatggc aatggacgac ctggatcagc
     1621 atgacgccaa caacgctggc gccaccgcgg ccgttcccgg atcgtcgccg ctaggcggtc
     1681 ggcacggtgc cgccgtcgat cacatattct gcgccggtga tggcggcggc tcgcggcgag
     1741 gcgaggaagg caacgaggtc ggccacttcg cgaggcttcg ccgggcggcc gagcggaatg
     1801 ccgcccagcg acgccatgac gatcttgcgc gcgccttcgt agtcggtggc gttgcggcgc
     1861 gcgatttcct cgacgaggcc gaccgcgccg gcggtctcga cccaaccggg cgagacgcgt
     1921 accacgcgca cgcccctggg gctgacttcc ttggacaggc ccttgctgta ggtcgagagc
     1981 gccgccttgg cggctgcata ggcaagcgtc gcttcaggca gcggcaattg gcgctggatc
     2041 gaggtgatat ggatgatcac gccagcgccc tgcgcgacca tcgaaggcag cagcgcgcgg
     2101 tccaggcgga cggcggccaa aaggttctgg ttgagcgcgt cgttccattg gctgtcgtcg
     2161 agcgccgcga agccgccggc cggcgcggag gagccgccga cgacgtgcac gatgatgtcg
     2221 actccgccca ggcgatcatg gacagcctgc gcgaccgcga tacagccttc ggcggtcgat
     2281 acgtccgccg tgacgaactg atcggcattg tcgagagttt ggggccgcga acgcgcggtc
     2341 gtgaggacga tcgcgccggc ctcgcgcagg gtcgcgacga ccgcttcacc gatgcctttg
     2401 gtgccgcccg tgacgagcgc ccgctttccc tggagttccg gcttgccgtt cattgatgaa
     2461 tcccctgaga tgctgaattc gcgccgcccg cagatggcga taggctcttg caatgacaag
     2521 aacgcacgaa aaagtagggt acccaccggc cggtaaggcc cggcagtaca cgcccgccac
     2581 cgccgccagc ggtgtcgagc aggcgttcaa ggtcctcgaa ggccgatgga agctggtgat
     2641 cctcttccac ctgttcggcg gaaagaccct gcgattttcc gagctcgaac gggccatccc
     2701 cgcgatctcg caaaagatgc tgacccagca gcttcgtcag ctggagaagg atggcatggt
     2761 gcggcggacc atccacccag aagtcccgcc cagggtcgaa tatcgcctga cggcgtgggg
     2821 acaggcgctg tgcccggcgc tcgacgcgct gctggaatgg acggcaggcc gtgaggtgta
     2881 tactggagcc caactcaaaa cgggtgtgcc atgacgatca ccgctgaagt gccgcgcacg
     2941 cgcgaggcaa ccggcgtcgg cgcgcgccca gagccaatcg agcgctggga ggtcgttgtc
     3001 atcggcgcgg gccttgccgg gatgtaccag ctcctgcgtc tgcgcgaact cggcttcaag
     3061 gcgcgtgtct acgaggcggg ccacggcgtc ggcggcacct ggtactggaa ccgctatccc
     3121 ggcgcgcgct tcgattcgga aagctggacc tatggcttct ccttctccga cgagctttta
     3181 ggcgaatggg attggaagga gcacttctcc ggacagccgg agaacctgcg ctactgcaat
     3241 ttcatcgccg acaagttcga cctgcgccgc gacatcacct tcggcgcccg cgccaggtcg
     3301 gcttgctggg acgaggccga caaggagtgg gaagtcgcct tcgaggacgg ccggcgcgcc
     3361 cgcgcccgat tcctgatcac ggcgatcggc ccgttgtcgg cgccgaccat gccgctgatc
     3421 gcgggtgtcg aggacttcaa gggcgaggcc taccacaccg gcctgtggcc gcacgagccg
     3481 gtgagcttcg cgggcaagcg cgtggcggtg atcggcaccg gtgcctcggg cgtgcaggcg
     3541 atcaccgaga tcgccaagac cgtgggccac atgaccgtgt tccagcgcac gcccaactgg
     3601 tgcgcgccgc tgcgcaacgg gccgatcgac gccgaggcca tgggcaagat cagggcgaac
     3661 tacaccgata tcttcgcccg ctgccgcgag acctacggct gcttcatcca tgccgccgat
     3721 ccgcgcaacg ccaccgaggt ttcagccgac gagcgcgaag ccttctacga aaaactctac
     3781 aaccagccgg gctttgcctt ctggcaaggc aatttccgcg attcgctcgt cgacaaggcg
     3841 gccaacgaca ccatgacggc tttcgtcacc aggaagatcc gcgcccgcgt caaggaccac
     3901 aaggtggccg acaagctgat cccgaccaac cacggcttcg gcacgcgccg ggtgccgctc
     3961 gagagcggct actacgaagt ctacaaccag cccaatgtcg agctgatcga tctgcgcgaa
     4021 acgccgatcg aacgcatcac cgaaaaaggc atcaggacca gcgacggcga gcgcgccttc
     4081 gacatgatca tcttcgccac cggcttcgac gccatcaccg gctcgttcga ccgcatcgac
     4141 atcaggggtc gcggcggcca acggctcaag gacaagtggg ccgacggtcc gcagacctat
     4201 ctcggactga acgtcgaagg ctttcccaac atgctgaccc tggttggccc gcacaatgcg
     4261 gcgaccttct gcaatctgcc gcgttgcatc gagcagaacg tcgaatgggt gagcgacctg
     4321 ctggcctaca tgcgcgaccg gaggctgacg cgcgtcgagg cgacggaagc ggccgagcgc
     4381 gactggacag cgcatgtgca cgagacagcc gcgcgcctgc tgctgacgca ggtcgactcc
     4441 tggatgaccg gcgtcaacaa gaacgtcgcc ggccgccaca agcgcacctt catggcctat
     4501 gcaggtggtg ccccgaaata ccgccagaaa tgcgacgagg ttgtggccca aggctacgac
     4561 ggcttcacgc tggcgtgatt tgccgacatc ggtgcggccg gtgatgacga gcctccccgc
     4621 cgcgcaagga aaccgatgtc gtccgtcctc gctatccagc cgtcaaccga ggccagcatg
     4681 ggggcgagcc ttctgtccgt cgg
//
LOCUS       DASWGA010000815         3326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_856874, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000815 DASWGA010000000
VERSION     DASWGA010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3326
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_856874"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1131
                     /locus_tag="VF991_19110"
     CDS             <1..1131
                     /locus_tag="VF991_19110"
                     /inference="COORDINATES: protein motif:HMM:TIGR01844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family outer membrane protein"
                     /protein_id="HEX9558610.1"
                     /translation="TLQLVQPLFRGGKTVADTKAAQANIQAQRATLADTEQNVLLAAV
                     TSYADLVQNIAIADARRNNVRVLIQQLDATRERFRVGELTITDVSQAEARLEGARADL
                     VQAEAQIRISEAAFQRTIGQKPGRLGEMPFVGGLPVSEEEAISLAMDAGPRAVSAQYR
                     ISAASYGVNSAIGDLLPQVNLVGVIQQQFDLQVPTDQFYTYGVRVQATVPIYQNGSEW
                     SRVRQAKELVGQRRNELDSARRAQAENVIRAWRQLDASRSRVTSFEAQVRANEVALNG
                     VRQEALVGSRTTLDVLNAEQELLNAQVSLVQARHDTQVSYYGVLAGIGRLTARTLALP
                     VEYYDEERYYNEVGSRWIGWGTGDSGAKPAPAPTTTTSSGSR"
     gene            1131..1691
                     /locus_tag="VF991_19115"
     CDS             1131..1691
                     /locus_tag="VF991_19115"
                     /inference="COORDINATES: protein motif:HMM:NF022155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2497 domain-containing protein"
                     /protein_id="HEX9558611.1"
                     /translation="MSDSRSANNDPSMDDILASIRKIISDDEARAQVNRQQGNNQQAA
                     SQPSDHPASASDVLLLTDLIEDPKSGAEGAGPSPIPLPRIDPADAAEMPQPSVGPPGD
                     ASLIGPAVAGAATSAFGRLNQAVQDSAPPPTAPDPGPAMSSNGKTVEDLVKEMLRPML
                     KEWLDRNLPPMVERFVEREIVRLTRR"
     gene            1758..>3326
                     /locus_tag="VF991_19120"
     CDS             1758..>3326
                     /locus_tag="VF991_19120"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008934032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEX9558612.1"
                     /translation="MLDKTYDPKEIEARRYPEWEQSGAFRAHPESNKPPYCIVIPPPN
                     VTGSLHMGHALTFTLQDVLIRWRRMKGDDVLWQPGTDHAGIATQMVVVRNLEQEGIGL
                     AVEGADKGDGNKQLLSRDEFIAKVWEWKAYSGGAITNQLRRLGASCDWSRERFTMDEG
                     LSRAVLKVFVDLYKAGLIYKDNRLVNWDPKMLTAISDLEVESREVKGSLWYFRYPIEG
                     SDEHIVVATTRPETMLGDTGVAVHPDDPKWKHLLGKHAILPLVGRRIPIVADEYSDPE
                     KGSGAVKITPAHDFNDFEVGRRHGLEAISIFDKFARLNDNAPATYRGLDRFDARKKIV
                     ADMEALGLVEKVEPHTHAVPYGDRGGVPVEPFLTEQWYADAKKLAQAPIAAAHDGRVK
                     FVPERGRDEFFRWMENIEPWCISRQLWWGHQIPAWYGPDRQVFVALSEEEAQQEARRH
                     YGREVTLERDPDVLDTWFSSALWPFATLGWPDETPDLSYFYPGHLQTTAREIIRLWEN
                     RMIFSGLEMMGEIPF"
BASE COUNT          597 a         1147 c         1099 g          483 t
ORIGIN      
        1 acgctccaat tggtccagcc gctgtttcgc ggcggcaaga ccgtggccga caccaaggcg
       61 gcccaggcca acatccaggc acagcgagcg acgcttgccg acaccgagca aaatgtccta
      121 ctggcggccg tgacctcgta tgccgacctg gtccagaaca tcgccatcgc cgatgcccgg
      181 cgcaacaacg tgcgggtgct catccagcag ctcgacgcca cgcgcgaacg cttccgcgtc
      241 ggtgagctca cgatcaccga cgtctcccag gccgaagcgc gcctcgaggg ggcccgggcc
      301 gacctcgtcc aggccgaggc gcagatacgg atctccgagg cggcgttcca gcgcacgatc
      361 ggccagaagc cgggccggtt gggcgagatg cccttcgtcg gcggcctgcc ggtcagcgag
      421 gaagaggcga tttcgctggc catggacgcc gggccgcgcg ccgtcagcgc ccaataccgc
      481 atctccgccg cgagctacgg tgtgaacagc gccatcggcg acctgctgcc ccaggtcaat
      541 ctcgtcggcg tcatccagca gcagttcgac ctgcaggttc cgaccgacca gttctatacc
      601 tacggcgtgc gcgtgcaggc gacggtgccg atctaccaga acggcagcga gtggtcgcgc
      661 gtgcggcagg ccaaggaact ggtcggccag cgccgcaacg agctcgacag tgcacgccgg
      721 gcccaggccg agaacgtgat ccgcgcctgg cgccagctcg acgcctcgcg ctcgcgcgtg
      781 acttccttcg aggcccaggt ccgcgccaac gaagtcgccc tgaacggcgt gcgccaggaa
      841 gcgctggtcg gctcgcgcac cacgctcgac gtgctgaacg ccgagcagga gctgctcaac
      901 gcccaggtca gcctggtgca ggcccggcac gacacgcagg tgtcctacta tggcgtcctg
      961 gccgggatcg gccgcctgac cgcccgcacc ctggcgctgc cggtcgagta ttacgacgag
     1021 gagaggtatt ataacgaggt gggctcgcgc tggatcggct ggggaaccgg cgattcgggc
     1081 gccaagcccg cgccggcgcc cacgacgacg accagctccg ggagcaggtg atgagcgact
     1141 ccagaagcgc caacaacgac ccatcgatgg acgacatctt ggcctccatc cgcaagatca
     1201 tctccgacga cgaggcccgc gcccaggtga acagacagca gggcaacaac cagcaggcgg
     1261 ccagccagcc ctccgatcac cctgcctcgg catcggatgt cctgctgctc accgacctga
     1321 tcgaggatcc caagtccggc gctgagggcg ccggcccatc gccaatcccg ctgccgcgca
     1381 tcgatcccgc cgatgccgcc gagatgcccc agccttcggt cgggccgccg ggtgacgcct
     1441 cgctgatcgg gcccgccgtc gccggtgcgg cgacctcggc ctttgggcgc ctcaaccagg
     1501 cggttcagga cagcgcgccg ccgcccaccg cccccgatcc gggtccggcc atgagcagca
     1561 acggcaagac cgtcgaggac ctggtcaagg agatgctgcg gccgatgctc aaggaatggc
     1621 tcgaccgcaa cctgccgccg atggtcgagc gcttcgtcga acgcgagatc gtccggctga
     1681 cccgccgctg accccaggcg ccaccgaatc gaacgccacg gcgccatccc gtggcgtttt
     1741 tcgttataag gctagaaatg ctcgacaaga cctacgaccc caaggagatc gaagcccgcc
     1801 gctacccgga gtgggagcag agcggcgcgt tccgcgccca tccggagtcg aacaagccgc
     1861 cgtactgcat cgtcatcccg ccgcccaacg tcacgggcag cctgcatatg ggccacgcgc
     1921 tcaccttcac cttgcaggac gtgctgatcc gctggcgtcg catgaagggc gacgacgtgc
     1981 tgtggcagcc cggcaccgat cacgccggca tcgccaccca gatggtggtg gtgcgcaacc
     2041 tcgagcagga gggcatcggg cttgccgtcg aaggcgccga taagggtgat ggcaacaagc
     2101 agctgctgag ccgcgacgag ttcatcgcca aggtctggga gtggaaagcc tattcgggcg
     2161 gcgccatcac gaatcagctc aggaggctgg gcgcgtcgtg cgactggtcg cgcgagcgct
     2221 tcaccatgga cgagggcctg tcgcgcgccg tcctgaaggt gttcgtcgat ctctacaagg
     2281 ccggcctgat ctacaaggac aaccggctgg tcaactggga tcccaagatg ctgacggcga
     2341 tctccgatct cgaggtcgaa tcgcgcgagg tcaagggcag cctgtggtac ttccgctatc
     2401 ccatcgaggg cagcgacgag catatcgtgg tggcgacgac ccggcccgag acgatgctgg
     2461 gtgacaccgg cgtggcagtg catcccgacg atcccaagtg gaagcacctt ttgggcaagc
     2521 acgcgatcct gccgctggtc ggccgccgca tcccgatcgt ggccgacgaa tattccgatc
     2581 cggagaaggg ctcgggcgcg gtgaagatca cgccggcgca cgactttaac gatttcgagg
     2641 tcggccgccg gcatgggctc gaagccatca gcatcttcga caagttcgcg cggctcaatg
     2701 acaacgcgcc ggcgacgtat cgcgggctcg accgcttcga cgcgcgcaag aagatcgtgg
     2761 cggacatgga ggcgctgggg ctggtcgaga aggtcgagcc gcacacccat gccgtgccct
     2821 acggcgaccg cggcggcgtc cccgtcgagc ccttcctgac cgagcaatgg tatgccgacg
     2881 ccaagaagct cgcccaggcg ccgatcgcgg cggcgcacga cggccgcgtg aagttcgtac
     2941 cggagcgcgg gcgcgatgag ttcttccgct ggatggagaa catcgagcca tggtgcatct
     3001 cgcgccagct ctggtggggc catcagatcc ccgcctggta cggcccggac agacaggtgt
     3061 tcgtcgcact gtcggaggag gaggcccagc aagaggcacg ccggcactac ggccgggagg
     3121 tgacgctgga gcgcgatccc gacgtgctcg acacctggtt cagctcggcg ctgtggccgt
     3181 tcgcgaccct cggttggccg gacgagaccc cggacctgtc gtacttttac ccggggcacc
     3241 tgcagacgac ggctcgcgag atcatccgcc tctgggagaa ccggatgatc ttctccggcc
     3301 tcgagatgat gggcgagatc ccgttc
//
LOCUS       DASWGA010000816         3088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1487772, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000816 DASWGA010000000
VERSION     DASWGA010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1487772"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..843)
                     /locus_tag="VF991_19125"
     CDS             complement(178..843)
                     /locus_tag="VF991_19125"
                     /inference="COORDINATES: protein motif:HMM:NF015945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HEX9558613.1"
                     /translation="MGLLERVGTLVRANLNDLIDKAEHPSKMIKQVILDMENQLLQVK
                     TQVAISIADQHMLEKKEKETGDKAADWLRKAELAVDRGQDDLARAALARHKAGERMQT
                     SFREQVADQRAQVVTLKAAFAKLEQKLAEAQSKSDMLLAQHRRARALGKASDARIAIG
                     GHSTIRTFERMKEKVNRHEAVSQAKSELAGDDLDDRFQQLERDDEVDRLLLDLKAKRG
                     MTA"
     gene            complement(1045..2478)
                     /locus_tag="VF991_19130"
     CDS             complement(1045..2478)
                     /locus_tag="VF991_19130"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX9558614.1"
                     /translation="MGLGITTGVGVTVGLMALTVILLTSILATLYRKAGPHEALVVYG
                     FRGCRVVKGHGTVIFPMIEACRQLSLELMSFDVAPVQDLYTKQGVAVTVEAVAQIKVK
                     SDPISIQTASEQFLTKSPDQREGLIRLVMEGHLRGIIGQLTVEQIVKEPEMVADRMRG
                     TCADDLSKMGLEVISFTIKEVRDKNEYIVNMGRPDVARIKRDADVAAAEADRDTAIKR
                     AEATRASAIAKAQADQERVLAETLSQAKQAEATRDLEIKKAQYVEIVKRQQAQADKAY
                     EIQTNVMLQQVTAEAVKVQQIEREQQIKVQEAEIVRRERELVATVLKPAEVERQRIET
                     LASAEKMRLTVEAEGSAAATRARGDAEADIIFKKGDAEARAMNNKAEAFQEYNQAAVL
                     DRLLVSLPDVVAALATPLSKVDKITVISTGNGDAAGVNKITGDITKMAAQVPALFEAL
                     SGMPLSELMSRVRKIGDKADHPGALGS"
     gene            complement(2487..>3088)
                     /locus_tag="VF991_19135"
     CDS             complement(2487..>3088)
                     /locus_tag="VF991_19135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558615.1"
                     /translation="FLLGFSLSAVSWLFGVLHLHGHLPHVGHGHGGAAAHAHSGHGGH
                     GAHAGHGVSVHSAPSPFNVATLTAFLAWFGGAGYLLTRYAEIWPLAALLLAIIAGCAG
                     ASLIFWFMAKVLWAPDENLDPDDYDVVGLLGVVSSPIRAGGTGEVLFSQAGARRGAGA
                     RSEDGQAIDKGVEVVITRQQNGLVYVRTWTELAADERPT"
BASE COUNT          478 a         1105 c          912 g          593 t
ORIGIN      
        1 gtcgtggcgc cgaacatgcc cgcgatcgtc gagttcttcg acgcgcaccg gaaaacggcg
       61 aaggcgactt cgcagcagtg acactcgtca tggctaatgg ctgagggcta atggcttatg
      121 ggagatggtc cgtccatgaa ccatagccat cagccatcag ccatggctga gcgaagctta
      181 agcggtcatg ccccgcttcg ctttcagatc cagcagcagg cgatccactt catcgtcgcg
      241 ctcgagctgc tggaagcgat cgtcgaggtc gtccccggca agctcggatt tggcctggct
      301 caccgcctcg tggcggttga ccttctcttt catgcgctcg aacgttctga tcgtcgaatg
      361 cccaccgatg gcgatccgtg cgtcgctggc cttccccagc gcgcgcgccc gccgatgctg
      421 cgccagcagc atgtcgctct tcgactgcgc ctcggcgagc ttctgttcga gcttggcgaa
      481 cgcggccttc agggtcacga cctgcgcccg ctgatcggcg acctgctcgc gaaagctcgt
      541 ttgcatccgc tcgccggcct tgtgccgcgc gagcgccgcg cgcgccagat cgtcctggcc
      601 gcggtcgacg gcgagctccg ctttccgcag ccagtcggcc gccttgtccc cggtctcctt
      661 ctctttcttc tcgagcatgt gctggtcggc gatcgaaatc gcgacctgcg tcttcacctg
      721 cagcaattga ttctccatgt cgagaatcac ctgcttgatc atcttcgacg ggtgctccgc
      781 cttgtcgatc agatcgttga ggttcgcccg taccagcgtt cccacgcgtt ccagtaatcc
      841 catcgtcgtg ctcctcaaat cgtccgcctg aaggcggaca ctacgagtga tgaaagcgcc
      901 tgaaaccgga cgctaagcgt gtcgcggaat tactcgtagc gccagccctt cagggctgcc
      961 aaagcggccg tctgcaggcc taaaggcctg cgctacgagc ggccgtcgtt ttattcccgc
     1021 aacgctcttc aagcatgctg accactacga gccaagggcc ccggggtgat ccgccttgtc
     1081 gccgatcttg cgcaccctgg acatcagctc cgacaacggc atccccgaca acgcctcgaa
     1141 cagcgccggc acttgggccg ccattttggt gatgtcgccg gtgatcttgt tcaccccggc
     1201 cgcatcgccg tttcccgttg agatcacggt gatcttgtcg accttgctga gcggcgtcgc
     1261 gagcgcggcg acgacgtccg gcaggctcac gagcagacgg tcgaggaccg ccgcctggtt
     1321 gtattcctgg aaggcttccg ccttgttatt catcgcgcgg gcctccgcgt cgcccttctt
     1381 gaagatgatg tccgcctcgg catcccctcg cgcgcgcgtc gcggcggctg aaccctcggc
     1441 ctcgacggtc aggcgcattt tctccgcgct ggccagcgtc tcgatccgct gccgctcgac
     1501 ctcggccggc ttcaggacgg tcgccaccag ctcccgttcg cgccggacga tctcggcttc
     1561 ctgcaccttg atctgctgct cccgctcgat ctgctgcacc ttcaccgcct ccgccgtcac
     1621 ctgctgcagc atcacgttgg tctgaatctc gtacgccttg tcggcctgcg cctgctgccg
     1681 cttcacgatc tcgacgtact gcgccttctt gatctcgaga tcgcgcgtcg cctcggcctg
     1741 cttggcctgc gacagcgtct ccgccagcac ccgctcctga tcggcctgcg ccttggcaat
     1801 ggccgaggcg cgggtggctt ccgcgcgctt gatcgccgtg tcgcgatcgg cttcagccgc
     1861 ggcgacgtcg gcgtcgcgtt tgatgcgcgc cacatcgggc cggcccatat tgacgatgta
     1921 ctcgttcttg tcgcggacct ccttgatcgt gaacgagatc acttccaggc ccatcttgct
     1981 caggtcgtcg gcgcacgttc cgcgcatgcg atcggcgacc atctccggct ccttcacgat
     2041 ctgctcgacg gtgagctggc cgatgatgcc gcgcagatgg ccttccatca ccagccggat
     2101 gagcccttca cgctgatcgg gcgacttggt caggaactgc tccgacgccg tctgaatcga
     2161 gatcggatcc gacttcacct tgatctgcgc cacggcctcc accgtgacgg ccacgccctg
     2221 cttcgtgtac aggtcctgca ccggcgccac gtcgaacgac atgagctcca gcgacaactg
     2281 gcggcacgct tcgatcatcg ggaatatcac cgtgccgtgg cccttcacca cgcgacaacc
     2341 tcggaagccg tacacgacca gcgcctcgtg cggacccgcc tttcgataca gcgtggccag
     2401 gatgctcgtg agaagaatca cggtgagcgc catcagcccc accgtgacac cgacgccggt
     2461 tgtgatgccc agacccatga cgcctcctat gtgggccgtt cgtccgccgc aagctccgtc
     2521 cacgtgcgga cgtacacgag cccgttctgc tgcctcgtga tgaccacctc gacgcccttg
     2581 tcgatcgcct ggccgtcctc gctgcgcgcg ccggcgccgc gtcgcgcccc cgcctgcgaa
     2641 aagagcacct ccccggtccc accggcacgg atcgggctgc tgacgacgcc gagcaggccg
     2701 accacgtcgt agtcgtccgg atccagattc tcgtccggcg cccacagcac cttcgccatg
     2761 aaccagaaga tgagcgacgc gccggcgcat ccggcgatga tcgccagcag cagtgcggca
     2821 agcggccaga tctcggcata ccgcgtgagc aggtacccgg cgccgccgaa ccatgcgaga
     2881 aaggccgtca aggtcgcgac gttgaacggc gacggcgcgc tgtgaacgct gacgccgtgc
     2941 ccggcgtgcg cgccgtggcc gccgtgcccg ctatgggcgt gcgccgcggc gccgccgtgg
     3001 ccgtggccca catgcggcag gtgcccgtga aggtggagga ctccaaacag ccaggaaacg
     3061 gcactgagcg agaaccccag caaaaagc
//
LOCUS       DASWGA010000817         1851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_466535, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000817 DASWGA010000000
VERSION     DASWGA010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466535"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..622
                     /locus_tag="VF991_19140"
     CDS             <1..622
                     /locus_tag="VF991_19140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558616.1"
                     /translation="FGARISLTVGLGATLAGGILGVTIGLMSGYLGGTVDLITQRLMD
                     IMQSLPLLVMALVMAAALGPSLENTIIAIAIPLVPTVARVVRSSTLSLREQPFVEAAR
                     AVGMGEVRIAMRHVLPNTLAPLIVLGTAQLGSAILVEASLSFLGLGIPEPYPSWGRML
                     SESAAEYVRTAPWLVIFPGVAISLTVFGTNLLGDALRDILDPRQRS"
     gene            634..1623
                     /locus_tag="VF991_19145"
     CDS             634..1623
                     /locus_tag="VF991_19145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558617.1"
                     /translation="MSALLEVEDLGTWFYTRQGIVKAVDSVDFQVASGETLAIVGESG
                     CGKSMTALSLMRLIPDPPGRIVSGVVKLGGRDLLKLSEEEMRRVRGNDISMIFQEPMT
                     SLNPVMTIGKQIAEALILHRDMNRKEALARAVEMLDLVRIPEPAQRAKEYPHQLSGGM
                     RQRAMIAMALACNPKLLIADEPTTALDVTIQAQILELILELQREFGAAVILITHDLGV
                     VAETARRVIVMYAGRKVEEAEVGELFSRPLHPYTVGLLASIPRLDLLRGEVRNATDRL
                     QEIPGIVPPLFDLPEGCAFAPRCPKADDLCRRERPVYKQTRPDHWAACWHSDA"
     gene            1616..>1851
                     /locus_tag="VF991_19150"
     CDS             1616..>1851
                     /locus_tag="VF991_19150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9558618.1"
                     /translation="MPEANMPVLEVKGLKKHFPVRKGLLRRTVGQVYAVDGISFAIGV
                     GETLGLVGESGCGKTTAGRAVLRLIEPTSGSIEVG"
BASE COUNT          276 a          661 c          607 g          307 t
ORIGIN      
        1 cttcggcgcg cgcatttcgc tcaccgtcgg cctcggcgcg acccttgccg gcggcatcct
       61 cggcgtgacc atcggcctga tgagcggcta tctcggcggc accgtcgatc tcatcaccca
      121 gcgcctgatg gacatcatgc agtcgctgcc gctcctggtg atggcgctgg tcatggcggc
      181 ggcgctcggc ccgtcgctcg agaataccat catcgccatc gccatcccgc tggtgccgac
      241 cgtggcccgc gtcgtgcgct ccagcacctt gtcgttgcgc gaacaaccct tcgtcgaggc
      301 ggcgcgcgcc gtcggcatgg gcgaggtgcg catcgccatg cgccacgtgc tgcccaacac
      361 cctggcgccg ctgatcgtgc tcggaacggc gcagctcggc tcggccatcc tggtcgaggc
      421 ctcgctgtcc ttcctcgggc tgggcatccc cgagccctat ccgtcgtggg gccgcatgct
      481 gtcggaatcg gccgccgaat acgtgcgcac ggcgccgtgg ctggtgatct tcccgggcgt
      541 cgccatcagc ctcacggtgt tcggcaccaa ccttttgggc gacgcgctgc gcgacatcct
      601 cgatccccgt cagcgatcct gagagcagcg ttcatgagcg cacttctcga ggtcgaagac
      661 ctcggcacct ggttctatac aaggcagggt atcgtcaagg cagtcgacag cgtcgacttc
      721 caggtcgctt cgggcgagac cctggcgatc gtgggcgaat cgggctgcgg caagagcatg
      781 accgccttgt cgctgatgcg cctgatcccc gatccgccgg gccgcatcgt ctcgggcgtg
      841 gtcaagctcg gcggccgcga cctcttgaag ctcagcgaag aagagatgcg ccgggtgcgc
      901 ggcaacgaca tctcgatgat cttccaggag ccgatgacgt cgctcaatcc ggtgatgacc
      961 atcggcaagc agatcgccga ggcgctgatc ctgcaccgcg acatgaaccg caaggaggcg
     1021 cttgcgcgcg ccgtcgagat gctcgacctg gtgcgcatcc ccgagcccgc ccagcgcgcc
     1081 aaggaatatc cgcaccagct gtcgggcggc atgcgccagc gcgccatgat cgccatggcg
     1141 ctggcctgca atcccaagct gctgatcgcc gacgagccga cgacggcgct cgacgtcacc
     1201 atccaggcgc agatcctcga gctgatcctc gagctgcagc gcgagttcgg cgccgccgtg
     1261 atcctgatca cccacgatct cggggtcgtc gccgagaccg cccgccgggt catcgtcatg
     1321 tacgccggcc gcaaggtcga ggaggccgag gtcggcgagc tgttcagccg gccgctgcat
     1381 ccctacacgg tgggcctgct cgcctcgatc ccgcggctcg acctgctgcg cggcgaggtc
     1441 aggaacgcca ccgaccggct gcaggagatt cccggcatcg tgccgccgct gtttgacctg
     1501 cccgagggct gcgccttcgc gccccgttgt cccaaggccg acgatctttg ccggcgcgag
     1561 cggccggtct acaagcagac acggccggac cactgggcgg cctgctggca cagcgatgcc
     1621 tgaagccaac atgcccgtgc tcgaggtcaa gggcctcaag aagcacttcc cggtgcgcaa
     1681 gggcctgttg cgccgcacgg tcggccaggt ctacgccgtc gacggcatca gcttcgccat
     1741 cggcgtcggc gagaccttgg ggctggtggg cgagagcggc tgcggcaaga ccaccgccgg
     1801 ccgcgccgtt ctgcgcctga tcgagcccac gtccggctcg atcgaggtcg g
//
LOCUS       DASWGA010000818         2383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_617962, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000818 DASWGA010000000
VERSION     DASWGA010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_617962"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..825)
                     /locus_tag="VF991_19155"
     CDS             complement(13..825)
                     /locus_tag="VF991_19155"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEX9558619.1"
                     /translation="MAFSLGPRASSAGYRLAAFDRIGSTNAEAMARARDGERGPMWFV
                     TSEQTAGRGRRHRPWIAPRGNLASSVLEVVDVSPAVAATLGFAAGVALEAALQKVSIE
                     ASLRSAGSDHMKFSLKWPNDVLAGRQKLAGILLEAEAVAGDRLAVVVGVGTNVVAAPE
                     GTPTPATSLAALGVHIGAEELFATLSDAWAEFRGIWDNGRGFGVIRGLWLERAAGLGE
                     AVAIQAGGSVVEGTFDTIDDTGCLIVRTADGRRMPISAGDVYFGSAASAGAA"
     gene            complement(926..2365)
                     /gene="nuoN"
                     /locus_tag="VF991_19160"
     CDS             complement(926..2365)
                     /gene="nuoN"
                     /locus_tag="VF991_19160"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEX9558620.1"
                     /translation="MSFESAGYPLLSVLPELVLAAGAMVLLMLGAYRGQQTTSLVTGL
                     AICLMVLVGGLELLLPAGKLTTFAGGFIVDDFARFLKILTLIGSVATLVLSAEYLADP
                     SRRIFEYSILVLLSTLGMMVLISAGDLIMLYLGLELMSLALYVVAASNRDNLKSTEAG
                     LKYFVLGALSSGMLLYGASLIYGFTGTVSFAGIAAATKAGTSVGIVFGLVFLLAGLCF
                     KVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMAVFTRATLTAFPGILSQWQQIVV
                     FVAIASMALGSFAAIGQKNIKRLMAYSSIGHMGFALVGLAAGTAEGTQGVLVYIAIYV
                     SMTLGSFAVILTMKRNGHHVEDISALSGLSRTNPLLAFFFAMLLFSLAGIPPLAGFFA
                     KWYVFVAAIKAGLFTLAVVGVLTSVVGAYYYLSIIKVMYFDEPLVRLDPMRMELRTVL
                     AVAGLFNIFFFVYPGPLVSVATAAAKSLF"
BASE COUNT          511 a          797 c          711 g          364 t
ORIGIN      
        1 ccggtcccgc catcaggctg cccccgccga cgctgccgag ccgaaataga cgtcgcccgc
       61 cgatatgggc atccgcctgc catcggccgt ccggacgatc aggcagcctg tgtcatcgat
      121 ggtgtcgaat gtcccttcca cgacggagcc gccggcctgg atcgcgaccg cctctccaag
      181 cccggcggcg cgctccagcc agagcccccg gatcacgcca aagccacggc cattgtccca
      241 gatgccgcgg aattccgccc aggcgtccga cagcgtagca aataattcct ccgcgccgat
      301 atggacaccc agcgctgcca gtgaggtcgc tggcgttggc gtgccttccg gcgccgcgac
      361 gacgttggtg ccgacgccga ccaccacggc cagtcgatcg cccgctacgg cttccgcttc
      421 cagcagaatg ccggcgagct tctgtcgtcc cgccaggacg tcgttgggcc atttcagcga
      481 aaacttcata tgatccgatc ccgccgacct cagcgacgcc tcaatgctca ccttctgcag
      541 cgccgcctcc agcgcaaccc ccgcggcaaa acccagcgtc gccgcgaccg caggggacac
      601 gtcaaccact tcgaggacgc tgctggcgag gttaccacgg ggcgcgatcc aggggcgatg
      661 ccgccgtccg cgtccagccg tctgctccga tgtcacgaac cacatcggtc cgcgctcgcc
      721 gtcccgcgcc cgcgccatgg cttccgcgtt ggtcgagccg atacgatcga aggcggcgag
      781 ccggtagccg gccgaactgg ctcgaggacc gagcgagaat gccatctcag ggctgatccg
      841 gcttagccaa agccggctgg gtgtcgatgt tctttttggg catgatcttc tccgaaaacc
      901 gggatccact tttcggggtc atgccctaaa agagcgactt cgcggcagcc gtcgccacgc
      961 tgaccagcgg ccccggatag acgaagaaga agatgttgaa caggcccgcg accgccagca
     1021 ccgtgcgcaa ttccatgcgc atcgggtcga gcctgaccag cggctcgtcg aaatacatca
     1081 ccttgataat ggagagatag taatacgcgc caaccacgct ggtgagcacg ccgacgacgg
     1141 cgagtgtgaa caatcccgcc ttgatcgccg caacgaacac gtaccatttt gcgaagaagc
     1201 cagcgagcgg cggaatgccc gccagcgaga acagcagcat cgcgaagaag aatgccagca
     1261 agggattggt gcgcgataat ccggacaagg cgctgatgtc ctcgacatgg tgaccgttgc
     1321 gcttcatggt caggatgaca gcgaaagagc cgagcgtcat cgacacatag atcgcgatgt
     1381 agaccagcac gccctgcgtc ccctctgccg tgcctgcagc caggccaacc agggcaaaac
     1441 ccatatggcc gatcgaggaa taggccatca gtcgcttgat gttcttctgg ccgatggcgg
     1501 cgaacgatcc cagcgccatc gaggcgatcg cgacgaacac cacgatctgc tgccattgcg
     1561 agaggatgcc ggggaatgca gtgagcgtcg cgcgtgtgaa caccgccatc gccgcgacct
     1621 tcggcgcgga ggcaaagaac gccgtcaccg gcgtcggtgc cccctcatag acgtcgggcg
     1681 tccacatatg aaagggcacc gccgaaacct tgaagcagag cccggcgagc aggaacacca
     1741 ggccgaacac gatgccgaca ctggtgcccg cctttgtggc cgccgcgatg cctgcaaaac
     1801 tcacggtgcc ggtgaagcca tagatcaatg aggcgccgta cagcagcatc cccgacgata
     1861 gcgcgcccag cacgaagtac ttcaagccgg cttcggtgga tttgaggttg tcgcgattgc
     1921 tcgccgccac cacgtaaagc gcgagagaca tcagctcaag cccgagatag agcatgatca
     1981 ggtcgccggc cgagatcagc accatcatcc ccagggtcga gagcagcacc aggatcgagt
     2041 actcgaagat gcgccgggat ggatcggcca gatattccgc cgaaagaacg agcgtcgcca
     2101 ccgatccgat cagcgtcagg attttcagga agcgggcaaa gtcgtcgaca atgaagccgc
     2161 cggcaaatgt cgtcagtttg cccgcgggca gcagcagctc cagcccgccg acgagcacca
     2221 taagacaaat tgcaaggccg gtgacgaggc tggtcgtctg ctggccccga taggcgccta
     2281 acatcaagag caccatggcg cctgcggcca gcacaagctc cggcagcacg gacagcaagg
     2341 gatatcctgc actctcaaag ctcatgacgc gttgtcctga aca
//
LOCUS       DASWGA010000819         1901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1994954, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000819 DASWGA010000000
VERSION     DASWGA010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1994954"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VF991_19165"
     CDS             <1..199
                     /locus_tag="VF991_19165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017990069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX9558621.1"
                     /translation="LNLVAAGLGITIVPASLSRLPLERVTYRTLKGRPALKVPLNLAC
                     RADERSAATLGFIELVRRLGE"
     gene            complement(168..1016)
                     /locus_tag="VF991_19170"
     CDS             complement(168..1016)
                     /locus_tag="VF991_19170"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX9558622.1"
                     /translation="MELRHLRYFVAVAHEGHITRAAEKLHIQQPPLSQQIKALEAEIG
                     AALFVRHPRGVALTDAGRSFQADAEAILASVDRAAQRARRTARGETGRIAVGFTTSAP
                     FHPLVARAIREFRTTRPDVSFVLEESSSSDLLAGLREERLDIAFIRSGLADPQGLTVH
                     ALLQEDMAVALPSRHRLARRPHLALKDLAAETFILYRRPDGRGLYDVIIAAVPDRQTG
                     VASGINNTVASVANLFAIAAFGALALHGALADGIRLAMLVAAGLALAGAACAALAIRR
                     GVAPAR"
     gene            1168..>1901
                     /locus_tag="VF991_19175"
     CDS             1168..>1901
                     /locus_tag="VF991_19175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9558623.1"
                     /translation="MTTLLAASLSLLMIFTAFLSGIFGMAGGLILIGVLLVVFPLPTA
                     MVLHAVTQMASNGWRALLWWRHIVWKNTAFYVAGCLVSVGLWSIWLYVPDKAVALLML
                     GLSPFIIRAVPERILPRSFGPLQVAATGLLSMMLMLLTGVTGPLLDTMFLRSPLERRQ
                     IIATKASCQVFGHGFKLVYFGALIEQAGQVEPWFLAIAVASSMIGTSAGKLLLEKLTD
                     QQFRTWSNRIITVLATYYVGYGLVLLA"
BASE COUNT          276 a          650 c          637 g          338 t
ORIGIN      
        1 gctgaacctg gtggcggccg gtctcggcat caccatcgtg ccggcctcac tcagccgcct
       61 gcccctggag cgcgtgacct accgcacgct gaagggccgg ccggcgctaa aggtgccgct
      121 caacctcgcc tgccgcgccg acgaacgctc ggccgcgacg cttggcttca tcgagctggt
      181 gcgacgcctc ggcgaatagc cagcgccgcg caggccgcgc cggccagcgc cagcccggcc
      241 gcgaccagca tggccagccg gatgccgtcg gccagcgcgc cgtgcagcgc cagggcgccg
      301 aaggctgcga tggcaaacag gttggccacc gaggccacgg tattgttgat gcccgacgcc
      361 acgccggtct gccggtcggg cacggcggcg atgatcacgt catagaggcc gcgtccgtcc
      421 ggccgccggt agaggatgaa ggtctcggcc gcgagatcct tcaaggccag gtgcggccgg
      481 cgcgccagcc gatggcgcga gggcagggcc accgccatgt cctcctgcag gagtgcgtgg
      541 acggtcaacc cttggggatc ggccagcccg gaccggatga aggcgatgtc cagccgttcc
      601 tcgcgcaggc cggccaaaag atcgctggag ctgctttcct ccagcacgaa ggagacgtcg
      661 ggccgcgtcg tcctgaactc gcggatggcg cgtgccacca ggggatggaa gggcgccgag
      721 gtggtgaagc ccacggcgat gcggccggtc tcgccgcgcg ccgtgcggcg tgcgcgctgg
      781 gcggcgcgat cgaccgaagc caggatcgcc tcggcatcgg cctggaagga gcggccggcg
      841 tcggtcagcg ccacgccgcg cggatggcgc acgaacaggg ccgcgccgat ctccgcttcg
      901 agcgccttga tctgctgcga caagggcggc tgctggatat gcagcttctc ggccgcgcgc
      961 gtgatgtggc cttcatgggc gacggcgacg aaatagcgga gatgacgcag ttccatttct
     1021 gtcgtcctga gcgaagcgaa ggatctcatc gccgcttgcc acggcatgag atgcttcgct
     1081 tcgctcagca tgacatatgt tttttatatc gagtaggcat ttatcatata tttgatgtgt
     1141 gcagtctgcg cgtccatcgt cgccgccatg accaccctgc tggccgcgag cctctccctc
     1201 ctgatgatct tcaccgcctt cctctcgggc attttcggca tggccggggg cctcatcctg
     1261 atcggcgtgc tgctggtcgt cttcccgctg cccaccgcca tggtgctgca cgcggtgacg
     1321 caaatggcct ccaacggctg gcgcgcgctc ctgtggtggc ggcacatcgt gtggaagaac
     1381 acggcgttct acgtcgccgg ctgcctggtc tcggtcggcc tgtggtcgat ctggctctac
     1441 gtccccgaca aggcggtggc gctgctgatg ctggggctgt cgccgttcat catccgcgcc
     1501 gtccccgaac gcatcctgcc gcgcagcttc gggccactgc aggtggcggc gaccggactc
     1561 ttatcgatga tgctgatgct gctgaccggc gtcaccggcc cgttgctcga caccatgttc
     1621 ctgcgctcgc cgctcgagcg gcggcagatc atcgccacca aggcctcgtg ccaggtgttc
     1681 ggccacggct tcaagctggt ttacttcggc gccttgatcg agcaggccgg ccaggtcgag
     1741 ccgtggttcc tcgccatcgc cgtcgcctcg tcgatgatcg gcacgtcggc gggcaagctt
     1801 ttgctcgaga agctcaccga ccagcagttc cgcacctggt cgaaccgcat catcaccgtg
     1861 ctcgccacct actatgtcgg ctacggcttg gtgctgctgg c
//
LOCUS       DASWGA010000820         6767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_618699, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000820 DASWGA010000000
VERSION     DASWGA010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6767
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618699"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="VF991_19180"
     CDS             complement(<1..356)
                     /locus_tag="VF991_19180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558624.1"
                     /translation="MTLLTAEALRPRRNWQAIITLVILLVVGFLVILPMVFLVGESLN
                     IGDPMSFPPEAYGIRNYLAIFDEDITVLWNTVIIAVMATVMAILIGFTLAWILTRTNV
                     PGRDKLERLMELPYYMT"
     gene            complement(364..1440)
                     /locus_tag="VF991_19185"
     CDS             complement(364..1440)
                     /locus_tag="VF991_19185"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9558625.1"
                     /translation="MKLFVAAAVALGAIAWSAGASAENGAKLCAKPRQMEGFKTCADV
                     DKAEAEGAFVLYSTDPEQGQAKLLASFNKMFPKIKTNYVRLQAGALYAKVRTERQAKS
                     YLVDVIQISDMGMILDFQRQGGFRQYISPEMAAFKPEYKSQPEGFWTWGSVIMAGIAY
                     NPNNVTAAEAPKKWEDLLDPKWKDAINVKVSNSGLQHGVWYMLKPILAKDYFKKFAEQ
                     KPRAFDSYVQQYGRLVDGQDKVIMGAQYSGYIEFKAKGAPLAFVFPETGVPAVSETYG
                     IVADGPHPNAAQLFMDWFLSPIGQQALAEALLLHSPRTDVPAPAGSVPLKDMKLLIPA
                     DWNAFEKDRAEFAKEWDRIVGARR"
     gene            complement(1526..2638)
                     /locus_tag="VF991_19190"
     CDS             complement(1526..2638)
                     /locus_tag="VF991_19190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX9558626.1"
                     /translation="MPSQTNAFTIPKTMKAWVLGGPDELSLVEKPVPEPGRAEVLVRI
                     DAIAVCATDIEIIKHGLPAIIDGGSPFNKGFTPGHEYMGTIVKLGPTVDEFEIGDRIT
                     VEVHAGCGRCQRCREGMYTSCLNYGYREKGHRANGFSTDGGFAEYAVNSVNTMVHVPD
                     DMSDEEATLVVTAGTAMYGLDVMGGIIAGEPVVVIGPGPIGLMGVGVAKALGASPVIL
                     TGTRERRLEMGKRLGADHVIDVTKEDAVAAVARLTGGKGVHYVLECSGAPNALNEAAR
                     MVNRGGRICLAAFPAEPVPVDLAYLVRNNIYVFGIRGEGKSATHRAAALMAQKRFDAK
                     LIHTHTFGLPEVPTAIKYARERIEDAIKVVVKMSAS"
     gene            2774..3751
                     /locus_tag="VF991_19195"
     CDS             2774..3751
                     /locus_tag="VF991_19195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020607779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558627.1"
                     /translation="MRRRAFLRIATLPAIGWPVGSKAQAFPTKPVTIIVPFSAGGPLD
                     TLCRILAEPMQAALGQAVLIEDVTGAGGAIGITRVARSPADGYTIISGNQGSHITLGA
                     MQQVSFDLLRDFAPVAMFATTSQLVLVRNSLDVANLRELLALIRANPGKLTDGGGGYG
                     TVAHTSVLYFMQLSGTTVQFVPYRGAAPALQDLMAGQIDMMIDQPSNSLPQVLAGKVR
                     ALAVTAPNRIAAAPDIPTTDEAGLPGFYTSVWQAMWVRRGTPDAVVETLNKAVREALA
                     DPKVKQRFADLGQEIPPAEQQTARWLAEFQKAEVDKWVPLVKAAKVKAD"
     gene            3839..4066
                     /locus_tag="VF991_19200"
     CDS             3839..4066
                     /locus_tag="VF991_19200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558628.1"
                     /translation="MTKLLEKALEAVRRLPPDSQDEIALAMLTLSGNEGEPEDVAAAH
                     LPAVLEGLAQAKRREFAADAEIEAAFRRFER"
     gene            4063..4248
                     /locus_tag="VF991_19205"
     CDS             4063..4248
                     /locus_tag="VF991_19205"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX9558629.1"
                     /translation="MKLRFTRQATQDLNSIADYVSERNPNAALRVRAAIVESLQTLVL
                     FPHIGRRQKAEGVSASS"
     gene            complement(4420..6057)
                     /locus_tag="VF991_19210"
     CDS             complement(4420..6057)
                     /locus_tag="VF991_19210"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX9558630.1"
                     /translation="MAHTFDPIELELLWRRLISMVDEAAAAMVRTSFSTLVRESYDFS
                     CVITDAAGQSLVQASESIPSFIGTLPETVKHFLRFFPPDQLAPGDVLITNDIWLGTGH
                     LPDITLAKPIFKDGKLVAFSATTAHAPDIGGKIRSPEPREVFEEGLQIPPMKMIAAGK
                     TDETLVTIIRKNVRTPDQTMGDLWAQVVALDLMEDRLRVLMDAYGLPDLTDLAREIQG
                     RCETAMRTAIRELPDGTYRSALQTDGLMDKPITLKMALTIKGDEIVMDFAGTDSQVDR
                     AINCALCYTNAMAMYGVKVCTSPNLPNNEGAWRPITLKAPEGCIVNPQFPAPGGSRML
                     IGHYVPMLVFGCLGQIVPERVMAACGSPMWGMNQSGVRDDGKGGGKPYANMFFYNGGM
                     GGNTQRDGVTCLSWPSNVSSTSIEISEHIAPLRFHHKKLRPDSGGPGRHRGGLGQEIL
                     IESRSDTPIAVSFLAERTIFPAFGIEGGKDGAPGELLINGEKTDPKKQYVVHKGDTVS
                     LGTPGGGGHGDPRRRDAAALAADVAAGYVSDRKVYGT"
     gene            complement(6057..>6767)
                     /locus_tag="VF991_19215"
     CDS             complement(6057..>6767)
                     /locus_tag="VF991_19215"
                     /inference="COORDINATES: protein motif:HMM:NF039581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9558631.1"
                     /translation="ALLATGGAGPVHAWHVARKLGIKRVVCPPGAGAGSTIGMLMAPA
                     RVDRVASFNVPLAGADFAAAGRVFAALEKEALDVLRLTGADIESRSVRRLADMRYIGQ
                     GSEITVALPQPLGEADVKEAFEAAYKGLFARTPPGAASQFVALRLSVSAPMPGSGGAL
                     ELPRHPSVSALKGTRSVFFPDAGKMLPTQVWDRYALEPGVHIDGPAVFEEDESTFIVG
                     PGAKARLLGDGSILAEVG"
BASE COUNT         1142 a         2206 c         2228 g         1191 t
ORIGIN      
        1 gtcatgtagt agggcagctc catcagccgc tcgagcttgt cgcggcccgg cacgttggtg
       61 cgcgtcagga tccaggccag cgtgaagccg atcaggatgg ccatcacggt ggccatcacc
      121 gcgatgatca cggtgttcca gaggaccgtg atgtcctcgt cgaagatcgc gaggtagttc
      181 ctgatcccgt acgcttcggg cgggaacgac atcggatcgc cgatgttgag ggattccccg
      241 accaggaaca ccatcggcag gatgacgagg aagcccacga ccagcaggat caccagcgtg
      301 atgatcgcct gccagttgcg acgcggccgc aaggcctccg cggttagcag cgtcaaggcc
      361 ggctcagcgc cgcgcgccga cgatgcggtc ccactccttg gcgaactccg cacggtcctt
      421 ctcgaaagcg ttccagtcgg ccggaatgag cagcttcatg tccttgagcg gcacgctgcc
      481 ggctggcgcc ggcacgtcgg tgcgcggcga gtgcagcagc agcgcctcgg caagcgcctg
      541 ctggccgatc ggcgagagga accagtccat gaacagctgg gcggcattgg gatgcgggcc
      601 gtcggccacg atgccgtagg tttccgacac cgccggcacg ccggtctcgg ggaagacgaa
      661 ggcgagcggc gcgcccttgg ccttgaactc gatatagccc gagtactgcg cccccatgat
      721 gaccttgtcc tggccgtcga ccaggcggcc atattgctgg acgtaggaat cgaaggcgcg
      781 cggcttctgc tcggcgaact tcttgaagta atccttggcg aggatcggct tcagcatata
      841 ccacacgccg tgctgcaggc ccgagttgga caccttgacg ttgatcgcgt ccttccactt
      901 cggatcgagc aggtcttccc atttcttggg cgcttcggcc gccgtcacgt tgttgggatt
      961 gtaggcgatg ccagccatga tgaccgagcc ccaggtccag aagccttcgg gctggctctt
     1021 gtactcgggc ttgaaggccg ccatctcggg cgagatgtac tggcggaagc cgccctgcct
     1081 ctggaagtcg aggatcatgc ccatgtcgga gatctggatg acgtcgacca ggtaggactt
     1141 ggcctggcgt tccgtgcgga ccttggcgta gagcgcgccc gcctgcaggc gcacatagtt
     1201 ggtcttgatc ttggggaaca tcttgttgaa ggacgccagc agcttggcct ggccttgctc
     1261 gggatcggtc gaatagagca cgaaggcgcc ctcggcctcg gccttgtcga cgtcggcgca
     1321 ggtcttaaaa ccctccatct ggcggggctt ggcgcagagt ttggctccgt tctcggcgga
     1381 cgccccggcg ctccaggcga tggcgccgag cgcaacggcc gcggcaacaa acagcttcat
     1441 tgaactcctc ccttcacaca cgttgcaatg agcgtaacga tcgatgaagg gaggttcaat
     1501 cgccgtgttc cgctggccgc gccggctagc ttgcggacat tttcacgacc accttgatcg
     1561 cgtcctcgat ccgctcgcgc gcatacttga tggcggtcgg cacctcggga aggccgaagg
     1621 tgtgggtgtg gatcagcttg gcgtcgaaac gcttctgggc catcagggcc gccgcccggt
     1681 gcgtggcgct cttgccttcg ccgcggatgc cgaacacata gatgttgttg cgcacgagat
     1741 aggcgagatc gaccggcacg ggctcggcgg ggaaggccgc gagacagatg cggccgccgc
     1801 ggttcaccat gcgcgccgct tcgttcagcg cgttgggtgc gcctgagcac tccaggacat
     1861 aatgcacgcc cttgccgccg gtgaggcggg caaccgccgc gacggcgtcc tccttggtga
     1921 cgtcgatcac atggtcggcg cccagccgct tgcccatctc gagccggcgc tcgcgcgtcc
     1981 cggtgaggat caccggcgag gcgcccagcg ccttggcaac gccgacgccc atcaggccga
     2041 tcggcccggg accgatcacg acgaccggct cgccggcaat gatgccgccc atgacgtcga
     2101 ggccatacat ggcggttccc gccgtgacga ccagcgtcgc ctcctcatcc gacatgtcgt
     2161 cgggaacgtg gaccatggtg ttgacgctgt tgacggcgta ttcggcaaag ccgccgtccg
     2221 tgctgaagcc gttggcgcga tggcccttct cgcggtagcc gtagttgagg caggaggtgt
     2281 acatgccctc gcggcagcgc tggcagcggc cacagccggc gtgcacctcg accgtaatgc
     2341 gatcgccgat ctcgaactca tcgacggtcg gaccgagctt cacgatcgtg cccatgtatt
     2401 catggcccgg cgtaaagcct ttgttgaaag gcgatccgcc gtcgatgatc gcgggcagcc
     2461 catgcttgat gatctcgatg tcggtggcgc agacggcgat ggcgtcgatg cgcaccagca
     2521 cttcggcgcg gccgggctcg ggcaccggct tttcgaccag actgagctcg tcggggcctc
     2581 cgaggaccca cgctttcatg gtcttgggaa tcgtgaacgc atttgtctgc gacggcatgg
     2641 gcgagctccc gcgcgagagt gtcgcccagt atagggcgag gcgcgcgatc cttgccagcg
     2701 tccggcgcca atgcaagtct ttatgaaagc gcgttgcgtt gtgactagaa atcccaagca
     2761 gctggaggcc acgatgcgac ggcgtgcttt cctgcggatc gcgacccttc ccgcaatcgg
     2821 ctggccggtc ggctcgaagg cgcaggcctt tccgaccaag cctgtgacca tcatcgtgcc
     2881 gttctcggcg ggcggtccgc tggacactct gtgccgcatc cttgccgagc ccatgcaggc
     2941 ggcactcggc caagccgtcc tgatcgaaga tgtcaccggc gccggcggcg caatcggcat
     3001 cacgcgcgtg gcgcggtccc ctgccgacgg ctacacgatc atttcgggca atcagggctc
     3061 gcacatcacg ctcggcgcca tgcagcaggt gtccttcgat ctgttgcggg acttcgcgcc
     3121 ggtcgcgatg ttcgccacca cctcgcagct ggtcctcgtc aggaattcgc tggacgtggc
     3181 gaacctgcgc gagctgctgg ccttgatccg ggcaaatccc ggcaagctga cggacggcgg
     3241 tggcggctac ggcacggtgg cgcacacctc ggtgctctat ttcatgcagc tgagcggcac
     3301 gacggtgcag ttcgtaccct atcgcggcgc cgccccggca ctgcaggacc tgatggccgg
     3361 gcagatcgac atgatgatcg accagccgtc gaacagcctg ccccaggtgc ttgccggcaa
     3421 ggtcagggcg ctcgccgtca cggcgcccaa ccggatcgcg gccgcgcccg acatccccac
     3481 caccgacgaa gccggcctgc ccggtttcta cacctcggtg tggcaggcga tgtgggtgcg
     3541 acgcggcacg cccgacgcgg tggtcgagac gctgaacaag gcggtgcgcg aggcgctggc
     3601 cgaccccaag gtcaagcagc ggttcgctga cctggggcag gagatcccgc ccgccgagca
     3661 gcaaaccgcg cgctggctgg ccgagttcca gaaggccgag gtcgacaagt gggtgccgct
     3721 ggtcaaggcg gcgaaggtca aagcggacta aggtcgatag ccgatcatcc atgcgatgat
     3781 gctagctagg actgggagtg gtcttcattt tgcgccggga agcgtctatc gtacaaatat
     3841 gacgaagctc cttgaaaaag ctcttgaagc ggtgcggcgt ctcccgccag acagtcagga
     3901 tgaaatcgcg ctcgccatgc tcacgctgag cggaaacgag ggcgagcccg aagatgtcgc
     3961 cgctgcgcac ttgcctgccg tcttggaggg cctcgctcaa gccaagcgtc gcgagttcgc
     4021 cgctgatgcc gagatcgaag cggcgttccg ccgcttcgag cgatgaaact tcgcttcact
     4081 cgtcaagcaa cacaagatct caacagcatt gccgactacg tcagcgagcg aaatccaaac
     4141 gccgcgttgc gtgtccgcgc cgcgatcgtc gagtcactcc agacgcttgt tctttttccg
     4201 cacatcggcc ggcgacagaa ggctgaaggt gtgtccgcaa gctcgtgacc cgtcgctatc
     4261 catatctcgt ttactacata atcgacgagg catcggaaga aatcgtgatc atcgcgatcc
     4321 agcacccggc tcgcgagcgc gaagactcgg atgcatagtt acgccagaga tcggcgctcg
     4381 ctttcgatga agcagcgacg ggaaccatat cgacgttcct catgtcccat aaaccttacg
     4441 atccgacaca tacccggccg ccacgtcggc ggcgagcgcc gccgcgtcgc gccggcgcgg
     4501 atcgccgtga ccgccgccgc ccggcgtacc cagcgagacg gtgtcgccct tgtgcacgac
     4561 gtactgtttc ttgggatcgg tcttctcgcc gttgattaaa agttcgccgg gcgcgccgtc
     4621 cttgccgccc tcgatgccga aggcgggaaa gatcgtccgc tcggcgagga atgagaccgc
     4681 gatcggcgtg tcgctgcggc tttcgatcag gatctcctgc cccaagccgc cgcgatggcg
     4741 gccgggaccg cccgaatcgg gccgcagctt cttgtgatgg aagcgcagcg gcgcgatgtg
     4801 ctcgctgatc tcgatcgagg tcgagctcac gttcgacggc cacgacaggc aagtgacgcc
     4861 atccctctgc gtgttgccgc ccatgccgcc gttgtagaag aacatgttgg cgtagggctt
     4921 gccgcccccc ttgccgtcgt cgcgcacgcc cgactggttc atgccccaca tcggcgagcc
     4981 gcaggccgcc atcacgcgct cgggcacgat ctggcccagg cagccgaaca ccagcatcgg
     5041 cacgtagtga ccgatcagca tgcgcgaccc accgggtgcg gggaattgcg gattgacgat
     5101 gcagccttcc ggcgccttca aggtgatcgg ccgccaggcg ccctcgttgt tgggcaggtt
     5161 ggggctggtg cagaccttga ccccgtacat cgccatggcg ttggtgtagc aaagcgcgca
     5221 gttgatggcg cgatcgacct gggagtcggt gccggcgaag tccatcacga tctcgtcgcc
     5281 cttgatggtg agtgccatct tgagcgtgat cggcttgtcc atcaggccgt cggtctgaag
     5341 cgcgctgcga taggtgccgt cgggaagctc gcggatcgcc gtccgcatcg ccgtctcgca
     5401 gcggccctgg atctcgcgcg ccagatcggt gaggtcgggc aggccgtagg catccatcag
     5461 gacgcgtagc cggtcttcca tcaggtcgag cgcgacaacc tgcgcccaca gatcgcccat
     5521 cgtctggtcg ggcgtgcgca cgttcttgcg gatgatggtg accagggtct cgtcggtctt
     5581 gccggcggcg atcatcttca tcggcgggat ctgcaggcct tcctcgaaga cctcgcgtgg
     5641 ttcgggactc ctgatcttgc cgccgatatc gggcgcatgc gcggtggtgg cgctgaaagc
     5701 caccagcttg ccgtccttga agatcggctt ggccagggtg atgtccggca agtggccggt
     5761 gcccagccag atgtcgttgg tgattaaaac gtcgcccggc gcgagctggt cgggcgggaa
     5821 gaagcgcagg aagtgcttca ccgtctccgg cagggtaccg atgaagctcg ggatgctttc
     5881 gctcgcctgc accagcgatt ggcccgccgc atcggtgatg acgcaggaga agtcgtagct
     5941 ctcgcgcacc agggtggaga agctggtgcg caccatggcg gccgcggcct cgtcgaccat
     6001 ggagatcagc cgccgccata ggagctcgag ctcgatggga tcgaaggtgt gcgccatcaa
     6061 ccgacctccg ccaggatgga accgtcgccc agcagccgcg ccttggcgcc ggggccgacg
     6121 atgaaggtgc tctcgtcttc ctcgaatacc gcgggcccgt cgatgtggac gccgggctcg
     6181 agcgcgtagc gatcccacac ctgcgtcggc agcatcttgc cggcatcggg gaagaacacc
     6241 gaccgcgttc ccttgagcgc cgatacagag ggatgacgcg gcagttcgag cgcgccgccg
     6301 ctgccaggca tcggcgcgct gaccgaaagc cgcagcgcca cgaactggct cgccgcgccc
     6361 ggcggcgtgc gggcaaataa tcccttgtag gctgcctcga aggcttcctt cacgtcagcc
     6421 tcgccgagcg gctgcggcaa cgcgacggtg atctcgctgc cctgcccgat atagcgcatg
     6481 tcggcgagac gccgaacgct gcggctctcg atgtcagcgc cggtgagacg cagcacgtcg
     6541 agcgcctcct tctccagcgc ggcgaacacg cgtccggcgg cggcaaaatc ggcgccggcc
     6601 aacggcacat tgaagctcgc cacgcgatcg acccgggccg gcgccatcag catgccgatg
     6661 gtgctgccgg cgcccgcgcc cggcggacag acgacgcgct tgatcccgag cttgcgggcg
     6721 acgtgccagg catggacggg tcccgccccg ccggtcgcca gcagcgc
//
LOCUS       DASWGA010000821         1745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1867864, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000821 DASWGA010000000
VERSION     DASWGA010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1867864"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..353
                     /locus_tag="VF991_19220"
     CDS             <1..353
                     /locus_tag="VF991_19220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017991243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9558632.1"
                     /translation="AASGAFLIGGGWTAGLDERQKLARALRSSVEGNLWVASRVVPAL
                     AHLHVLRIWAGMNVNIDRAPILGEVPGLPGFYNCVSSNGYTLAPVLARLTAEMMSGRQ
                     TSLPVEPYSLRRFG"
     gene            complement(369..>1745)
                     /gene="hydA"
                     /locus_tag="VF991_19225"
     CDS             complement(369..>1745)
                     /gene="hydA"
                     /locus_tag="VF991_19225"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004157 - dihydropyrimidinase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HEX9558633.1"
                     /translation="IGVSSGRVVALGERLDKGRKEIDATTLIAVPGGIDAHVHFDQDT
                     ADGSVFCDDFESGSRAAAAGGTTTIIPFAYQSRGQSLRDAVNRYHKRAEGKSLIDYAF
                     HVILSDPSEKIMGQDFPALVADGYTSFKVYMTYDDVKLTDREMLDALAASRREQAMLM
                     IHAENSDCIGWLTERLELKGMTAAKFHATSRPFVVEREATHRAISLAELLDVPVLLVH
                     VSAKEAMHEIQRAQARGLKVFGETCPQYLFLSEEDFEKPGDEGSKCVCSPPPRGTENQ
                     EHIWTGLSANTFQVLSSDHAAFKYDDVRGKKLPGAAKSFRKIPNGVPGVETRLPLLFS
                     EGVNKGRLTLQQFVALSSTNAAKIYGLHPRKGTIAVGADADIVLWDPKRRVSLTNSIL
                     HHNCDYTPYEGRELLGYPVMTLSRGEVVMEEAKMSGSAGRGLFQKCDRPQAARPRGKP
                     LIDPSIFN"
BASE COUNT          275 a          552 c          598 g          320 t
ORIGIN      
        1 aggcggcatc gggtgccttc ctgatcggcg gcggctggac agcgggactg gacgagcgcc
       61 aaaagctcgc gcgcgcgctg cgctccagcg tcgaaggcaa tctctgggtg gcgagccggg
      121 tcgtgccggc gctcgcccac ctgcacgtcc tccgcatctg ggccggcatg aacgtcaata
      181 tcgaccgcgc acccattctc ggcgaggtgc cggggctgcc gggattttat aattgcgtca
      241 gctccaacgg ctatacgctg gcgccggtgc tggcgcggct gacagcggag atgatgtcgg
      301 gccgccaaac gagtctgccg gtcgagcctt attccttgcg ccgcttcggc tgatggctgc
      361 cggatgattc aattgaagat cgatggatcg atcagcggct tgccgcgcgg acgggcggcc
      421 tggggccggt cgcacttctg gaacaggccg cggccggccg agccgctcat cttggcttcc
      481 tccatcacga cctcgccgcg cgacagggtc atgaccgggt agcctaaaag ctcacggccc
      541 tcgtagggcg tgtagtcgca attgtgatgg aggatcgaat tggtgagact cacgcggcgc
      601 ttgggatccc acagcacgat gtcggcatcg gcgcccaccg cgatcgtgcc cttgcgcgga
      661 tgcaggccgt agatcttggc ggcgttggtc gaggagagcg ccacgaactg ctgcaaggtg
      721 aggcggccct tgttgacgcc ctcggagaac aacagcggca ggcgcgtctc gacgcccggc
      781 acgccgttgg ggatcttgcg gaagcttttc gcggcgcccg gcagcttctt gccgcgcacg
      841 tcatcgtact tgaaggcggc gtggtccgac gacaggacct ggaaggtgtt ggccgaaagc
      901 ccggtccaga tatgctcctg gttctcggtg ccgcgcggcg gcggcgaaca cacgcatttg
      961 ctgccctcgt cgcccggttt ttcgaaatcc tcttcgctca ggaacaggta ttgcgggcag
     1021 gtctcgccaa aaaccttcaa tccgcgggcc tgggcgcgct ggatctcgtg catcgcctcc
     1081 ttggccgaga cgtgcaccag cagcaccggc acgtctaaaa gctcggccag cgagatggcg
     1141 cggtgcgtgg cctctcgttc gaccacgaac ggtctggagg tggcgtggaa cttggcggcc
     1201 gtcatgccct tgagctccag gcgctcggtc agccagccga tgcagtcgga gttctcggcg
     1261 tggatcatca gcatcgcctg ctcgcgccgc gacgcagcca aggcatcgag catctcgcgg
     1321 tcggtgagct tcacgtcgtc gtaggtcatg tagaccttga acgaggtata gccgtcggcc
     1381 accagggccg ggaaatcctg gcccatgatc ttttcgctgg ggtccgacag gatgacatgg
     1441 aaggcatagt cgatcagcga cttgccctcg gcgcgcttgt gatagcggtt gaccgcatcg
     1501 cgcagcgact ggccgcggct ctggtaggcg aaggggatga tggtggtggt gccgccggcc
     1561 gccgccgccc ggctgccgct ttcgaaatcg tcgcagaaca ccgacccgtc ggcggtgtcc
     1621 tggtcgaaat ggacgtgggc gtcgatgccg cccggcacgg cgatcagggt cgtggcgtcg
     1681 atctccttgc ggcccttgtc gagccgctcg ccgagcgcca cgacgcggcc gctcgatacg
     1741 ccgat
//
LOCUS       DASWGA010000822         2890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2377368, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000822 DASWGA010000000
VERSION     DASWGA010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2377368"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="VF991_19230"
     CDS             <1..641
                     /locus_tag="VF991_19230"
                     /inference="COORDINATES: protein motif:HMM:NF025114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9558634.1"
                     /translation="NRPPLDGIEAYEGKSVFYYVTQRENFRGKRVVIAGGGDTAVDWA
                     LSLAEVADRVSVIHRRDKFRAAPESEAQLKALVKAGKIDLVVPYQLQALEGANGQLKA
                     VTVATLDGATRRIEADTLLPFFGLSMSLGPIAEWSLALQHNQVAIDASTTVTSKPGIF
                     AIGDVVTYPGKLKLILTGFAEAAIAARSAYALVHPETPLHFEYSTMSGVPSV"
     gene            complement(660..1802)
                     /locus_tag="VF991_19235"
     CDS             complement(660..1802)
                     /locus_tag="VF991_19235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase"
                     /protein_id="HEX9558635.1"
                     /translation="MSTDVKPFRIAVGSEVLEDLTSRLRKTRWPEAAPVDDWSQGVPL
                     KWIEEVCRYWANDYDWRRREALLNRFPQFTTAIDGLDIHFMHVRSPHPGAMPLILTHG
                     WPGSVVEFHKVIEPLVDPAAHGGDPADAFHVVCPSLPGFGFSGKPKTTGWGIDRIAAA
                     WAQLMDRLGYARYGAQGGDWGSAVTTALGALDAEHCAGIHITLAMSARPNVDGAPTPE
                     EARALKGIKYYADWDSGYSKQQSTRPQTLGYGLTDSPAGQAAWILEKFWAWTDCDGHP
                     ENILGRDELLDNVMLYWVTASAASSARLYWESFGPERRTIHKVAVPTGVAVFPREIVT
                     PVRRWMEGNFTNIRHWNEMPRGGHFAAFEQPELFVGDVRTFFRPLR"
     gene            1865..2143
                     /locus_tag="VF991_19240"
     CDS             1865..2143
                     /locus_tag="VF991_19240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558636.1"
                     /translation="MDDAELIAEVGQALWGPAWKGPMAEAVRHHKNAVGDWASGRLRV
                     PAGIWSELKEHMRRRRHELDRLAPRVQRAHDAALQRTVEQTKVGKRSS"
     gene            complement(2148..2594)
                     /locus_tag="VF991_19245"
     CDS             complement(2148..2594)
                     /locus_tag="VF991_19245"
                     /inference="COORDINATES: protein motif:HMM:NF024375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9558637.1"
                     /translation="MALPQDIRPVNNELADSITRSSEIPWIETKPGEAWTKVLWVGQE
                     SGRWAVLLKWKKGYVAPPHKHLSAAFAFVLSGKLQVRDNVYGPGDFLHEVNGMVHGAT
                     TALEDTEYLFFCDGPVLFFDKDGFTGYRGWEQVLRMQQTALPKAAE"
     gene            complement(2625..>2890)
                     /locus_tag="VF991_19250"
     CDS             complement(2625..>2890)
                     /locus_tag="VF991_19250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558638.1"
                     /translation="AHEPVRSLIYSAGDRAIRHVYVDGRQVVRDGKVLTIDVEAATAG
                     LVAGQRKRLKTVNQRDWAGRTAEQLAPPVYGTRERLPQARPVT"
BASE COUNT          467 a          965 c          986 g          472 t
ORIGIN      
        1 ccaaccggcc gccgctcgac ggcatcgagg cctacgaggg taagagcgtc ttctactacg
       61 tgacgcagcg cgagaatttc cgcggcaagc gggtggtgat cgcgggtggc ggcgataccg
      121 ccgtcgactg ggcgctgtcg ctggccgagg tcgcggaccg cgtctcggtg atccaccgcc
      181 gcgacaagtt ccgcgccgcg cccgagagcg aggcccagct caaggcgctg gtcaaggcgg
      241 gcaagatcga tctcgtcgtg ccctaccagc tgcaggcgct ggaaggcgcc aatggccagc
      301 tcaaggcggt gaccgtggcc acgctcgacg gcgccacccg gcgcatcgag gccgacacgc
      361 tcctgccgtt cttcgggctc tccatgtcgc tgggtccgat cgccgagtgg agcctggcgc
      421 tgcagcacaa ccaggtcgcc atcgatgcct cgacgacggt gaccagcaag cccggcatct
      481 tcgccatcgg cgacgtcgtc acctatcccg gcaagctgaa gctgatcctg accggcttcg
      541 ccgaggccgc catcgccgcg cgctcggcct atgcgctggt ccatcccgaa acgccgctgc
      601 acttcgaata ttccacgatg tccggcgtgc cgtcggtcta ggcgcgccgc cggcggtctt
      661 tagcgcaacg gccgaaagaa ggtgcggacg tcgccgacga acagctcggg ctgctcgaag
      721 gcggcgaagt gtccgccccg aggcatttcg ttccaatgac ggatgttggt gaagttgcct
      781 tccatccagc gccgtaccgg cgtcacgatc tcgcggggaa acacggccac gccggtcggc
      841 acggcgacct tgtggatggt gcggcgctcc ggaccgaaac tctcccagta gagccgggcc
      901 gacgaagccg ctgacgcggt cacccagtac agcatgacat tgtccagcaa ctcgtcacga
      961 ccgaggatgt tttcggggtg tccgtcgcag tctgtccacg cccagaactt ctcgaggatc
     1021 catgccgctt gaccggcggg cgagtcggtc aggccgtagc ccagggtctg aggccgggtc
     1081 gactgctgct tggagtagcc ggagtcccag tcggcatagt atttgatgcc cttgagcgcc
     1141 cttgcctctt cgggcgtggg tgcgccgtcg acgtttggcc gcgccgacat ggccagagtg
     1201 atatggatgc cggcgcaatg ctcggcgtcc agtgcgccga gcgcggtcgt caccgcggag
     1261 ccccagtcgc cgccctgcgc gccatagcgc gcgtagccca ggcgatccat caactgggcc
     1321 caggcggcag cgatgcgatc gatgccccag ccggtggttt tgggcttgcc cgagaaaccg
     1381 aagccgggaa gcgacggaca gaccacgtgg aaggcgtcgg cgggatcgcc gccgtgggcg
     1441 gccgggtcga ccagcggttc aatgaccttg tggaattcga ccaccgagcc cggccagccg
     1501 tgggtgagga tcagcggcat ggccccgggg tgcggcgagc gcacgtgcat gaaatgaatg
     1561 tcgagcccgt cgattgcggt ggtgaactga gggaagcgat tgagcaacgc ttcccggcgg
     1621 cgccaatcgt aatcgttggc ccagtaccgg cagacctcct cgatccactt cagcggcacg
     1681 ccctggctcc agtcgtcgac cggcgcggcc tccggccagc gggtcttgcg caaccgcgac
     1741 gtgaggtctt ccaggacctc gctgccgacg gcgatgcgaa aaggctttac gtcggtgctc
     1801 atggtgggct cctcgctggt ctattggagt agagtgtcgg ctgcgttggc ggagggcaat
     1861 gcggatggac gacgccgagc tgatcgccga agtcgggcag gcgctgtggg gccccgcctg
     1921 gaaggggccg atggccgagg ccgtgcgcca tcacaagaac gccgtcggcg actgggcctc
     1981 cggccgcctg cgcgtcccag cgggcatctg gagcgagttg aaggagcaca tgcgcaggcg
     2041 ccggcacgaa ctcgatcgtc tggcgccgcg ggtccagaga gcccacgacg cggctctgca
     2101 gcggaccgtc gagcagacga aggtcgggaa gcgaagttcc taagccttca ctccgccgcc
     2161 ttcggcagcg ccgtctgttg catgcgcaag acctgctccc agccgcgata gccggtgaag
     2221 ccgtccttgt cgaagaacag gaccgggccg tcgcagaaga acaggtactc ggtatcctcc
     2281 agcgccgtcg tggcgccatg caccatgccg ttcacctcgt gcaggaagtc gcccgggccg
     2341 tagacgttgt cgcgaacctg cagcttgccg gacagcacga aggcgaatgc cgccgacagg
     2401 tgcttgtgcg gcggcgcgac gtagcccttt ttccacttca gcaggacggc ccaacggccg
     2461 gactcctggc cgacccacag gaccttggtc caggcctcgc cgggcttggt ttcgatccag
     2521 gggatttccg acgaccgcgt gatcgaatcg gccagttcat tgttcaccgg gcggatgtct
     2581 tgaggcaggg ccacgatttc ctccgtgctt cttgttggac aatactacgt caccggccgc
     2641 gcctgcggca ggcgctcgcg cgtgccgtag accggcgggg cgagctgctc ggccgtgcgg
     2701 ccggcccagt cgcgctggtt caccgtcttg agccgcttgc gctggcccgc gaccaggccc
     2761 gccgtagccg cctcgacatc gatggtcagc accttgccgt cgcgcacgac ctgccggccg
     2821 tcgacataga cgtggcggat ggcgcggtca cccgccgaat agatcaggct gcgcaccggc
     2881 tcgtgcgccg
//
LOCUS       DASWGA010000823         8412 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1107757, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000823 DASWGA010000000
VERSION     DASWGA010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8412
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1107757"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VF991_19255"
     CDS             <1..573
                     /locus_tag="VF991_19255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX9558639.1"
                     /translation="AFWTRFAAIDNVVAIKVAPFNRYRTLDVAVGIAQAAAEERITLY
                     TGNDDHIVADLITPMVVRTGNREVTLRFQGGLLGHWSVWTRGAVKMLERLKLSVSAGA
                     IPREVLALDSFVTDCNSVVFDVDHDFAGCIPGCHEILRRQGLMTSIECLDPHETLSPG
                     QSAGIDRLYATYPELNDDAFVAANLERWRN"
     gene            576..1979
                     /locus_tag="VF991_19260"
     CDS             576..1979
                     /locus_tag="VF991_19260"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9558640.1"
                     /translation="MDDLFATHDAFAVAQLVKTRKIGAREVLDGTLKKLRTINASLNA
                     ITDFYEGDLLEKSVAAAGEGPFQGVPFVVKQLMAECAGTPTTLGSRFFAKQPVAAADS
                     AAVVRMRRAGLVIVGRTNTSEFGLAPTTEPAFGGATVSPWREDLSPGGSSGGSAAVVA
                     ARCLPVAHATDGGGSIRIPASLCGLFGLKPSRGRVSLAPIGETLAGAGAQHCVSISVR
                     DSAALLDAIAGGEPGDPYRAPPAGSFLAAVQRSPGKLRVAFMRKPVGGAPIDPVLVAA
                     VERTARLLEELGHHVEEAAPDYDAAATGAAFGVVMCANTFTNLQVRAGGRIAGPDDLE
                     PATRRHAEIGQGISAHDYIRAVQTFHRTGRQLGQFLERHDVLLSPTIARTHLPLGAVR
                     MDGSLEQYQESLAPMVAFTSVCNVTGAPAMSVPLAWTDDGLPIGLHFVARFGAEEMLF
                     SLAAELERAQPWRERRP"
     gene            1976..2416
                     /locus_tag="VF991_19265"
     CDS             1976..2416
                     /locus_tag="VF991_19265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558641.1"
                     /translation="MTDWMRTVLVGFIAGAVSVLIFHQAGFWIANELGYTRVPLYSLR
                     PLPPWNVPTILSQAFWGGLWGVTVAFLVPRLPRPLNGALGWILFAGIIVTLVNWFIVL
                     PIKGLPMGNGFRMPGPIVLPLDYALWGFGMWLIAGLTRRLFGWR"
     gene            2427..3263
                     /locus_tag="VF991_19270"
     CDS             2427..3263
                     /locus_tag="VF991_19270"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9558642.1"
                     /translation="MKIVDAQVHIWAANTPQRPWPARGEPHRAPLGKDELLAAMDKAG
                     VDGVVIVPPSWEGDRNDLAVEAATAHPDRFCIMGRFNPDAPGARKQIAGWKKHKGMLG
                     VRFTFHTEILRQPLIDGRFDWVWGEMEKAGISAMVLFHHEYMPLADRIAERYPGLRLV
                     LDHCGLKSGKDVAEAENFATLDKMLALAKRSNVAAKVTAMPCYADDKTYPFRSVHPQI
                     RRIFDAFGPKRTFWGTDWSRLPCTYRQGITMFTEEMPWLKGDDLDSVMGRGVCEWIGW
                     RI"
     gene            3263..3454
                     /locus_tag="VF991_19275"
     CDS             3263..3454
                     /locus_tag="VF991_19275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558643.1"
                     /translation="MLGSKQTIPFWQQKRRLLTLERALAPDRKDSSSSAITAQAIARA
                     RVRDRMAAGSKKKARFSEH"
     gene            3513..3773
                     /locus_tag="VF991_19280"
     CDS             3513..3773
                     /locus_tag="VF991_19280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051983 - regulation of chromosome
                     segregation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HEX9558644.1"
                     /translation="MASSVDLGRQLEKFVSSLVSSGRYNSKSEVLREGLRLLQEREKR
                     LAALDLALDRGLADAKAGKLKPAEQVFARLEAKYRKMAKSRA"
     gene            3770..4078
                     /locus_tag="VF991_19285"
     CDS             3770..4078
                     /locus_tag="VF991_19285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003541977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX9558645.1"
                     /translation="MKVLFTEAAESDLEVIGDWIAKDNPGRAATFVRELRRSCVDIGP
                     RPLGYPLVEHRRNDGIRRKVHGNHLIFYRIWLDAVEILRVLHGARDYARILFSDNDLD
                     "
     gene            complement(4070..5041)
                     /locus_tag="VF991_19290"
     CDS             complement(4070..5041)
                     /locus_tag="VF991_19290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558646.1"
                     /translation="MSDWCGWPVVDEQTGWESAQQILTDAELSDGLPLVPPTRRRLDA
                     MVAGIKGRSESRSLMPPMFGDITAESIAYQCVIAGCRPAELPVVLAAAEATLDADFNL
                     LGVATTTGTACVALCVHGPIARQLGVNAGTNCLGPGNRANASIGRALQLTIRNIGGAR
                     PEVGDMATMGQPGKYTLCFAERNDGPFPTLTSRRGLGADTSAITVMGVSGTAEVLPGD
                     GEGATPEAILSPIVTAMRAAIVMSSMSRKNERGEQVVLLPLEMAQKIVRHDGWDLLRV
                     QRYMFDEGQGVARAPDAIHPIVTGGAGYKMTYLPIWGGGSQTVTRLI"
     gene            complement(5038..6075)
                     /locus_tag="VF991_19295"
     CDS             complement(5038..6075)
                     /locus_tag="VF991_19295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558647.1"
                     /translation="MTDTAEQEIIEIGDLDVEAFNEYATEQGWSDGMPLYIPTEDKVT
                     RFVDTVRGDNRPYPPVPPRQIVPTLKSLAANAVMAGCKPEYFPVVTAAMRGVLDPDYN
                     LHGTLATTHSCAPMVMVSGPIRHQLGINCGSNCFGQGWRSNATIGRALGLMLLNIAGA
                     KPGEMDRSTQGNPAKFTFCFGENEEENPWTPYHVRRGFAPSDSVVTVMSGEGPHNLND
                     HGSTTGIGLLTTFAGGMATPGANTVYGKGPMFVIIGPEHAATLKRDGFTIESIQEELH
                     KRARVHTSRISPENQETYISTGHKPDGDWFTVARTPQDIHITVAGGPGKHSAFIPSFG
                     GTTVASVRIAP"
     gene            complement(6072..6242)
                     /locus_tag="VF991_19300"
     CDS             complement(6072..6242)
                     /locus_tag="VF991_19300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558648.1"
                     /translation="MIATETFKPLVLAQAKARKVEPRLIVVKHPIGGLNADELRERIE
                     AATKGLSEATQT"
     gene            complement(6309..6590)
                     /locus_tag="VF991_19305"
     CDS             complement(6309..6590)
                     /locus_tag="VF991_19305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558649.1"
                     /translation="MRIVNPTFGLSAAVGETVALKSVNWKSDAIALVSNSKPNARELL
                     DGIRSKLGAFRPVDNIDFLSKNSASQPAPKDLLEQVAANYRGALLAIAD"
     gene            complement(6603..7457)
                     /locus_tag="VF991_19310"
     CDS             complement(6603..7457)
                     /locus_tag="VF991_19310"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9558650.1"
                     /translation="MIVIGAGPAGLAAATEAARAGLRTLCLDKLAPGGVLINLSQLHG
                     VAEASDGPQMASQLTDQATAAGAEIGFGEVVRLSGSGPWTVETAEGERHSGRAVVIAT
                     GLGKGRLGLPGEDKYEGRGLSHCASCDGPLYAGQPVVVAGAGGWASYEADELKGFASE
                     VTVVDTVAAQVPEGVRHIEGRIVGLEGGEGLQAIVVESAGARKTIPASAVFVYVGQSP
                     AAEFVPDSLARDATGHIVVDEGGRTSAASAFAAGDVRAGAQHSLAEAIADGQRAAQAV
                     VLALGKTN"
     gene            7680..>8412
                     /locus_tag="VF991_19315"
     CDS             7680..>8412
                     /locus_tag="VF991_19315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663086.1"
                     /note="LivHMGF is the membrane component of the LIV-I/LS
                     branched-chain amino acid transporter; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease LivH"
                     /protein_id="HEX9558651.1"
                     /translation="MAYFSQQLINAITLGAIYGLIAIGYTMVYGIIGMINFAHGEVFM
                     IGAFISLIGFMICSLLGIGSAPVAIVLVLLLAMAFSAVYGWAIERAAYRPLRGSFRLA
                     PLISAIGVSIALQNYVQLVQGARPKPGGQIVSGGFSLFSADDFDVRVSWLQIIIVVVT
                     VVLMAGFTWLIASTPLGRQQRACEQDMKMAALLGVDVDRTISFTFVLGAALAAVAGML
                     FLMYYGVIDFFIGFLAGIKAFTAAVL"
BASE COUNT         1326 a         2740 c         2824 g         1522 t
ORIGIN      
        1 gccttctgga cgcgcttcgc ggccatcgat aacgtcgtgg cgatcaaggt ggcgccgttc
       61 aaccgctacc gcacgctcga cgtcgccgtc ggcatcgccc aggcggcggc cgaggagcgc
      121 atcacgctct acaccggcaa cgacgaccac atcgtggccg atcttataac acccatggtg
      181 gtgcgcaccg gcaatcgcga ggtgaccctt cgtttccagg gcgggctgct ggggcactgg
      241 agcgtgtgga cgcgcggcgc ggtcaagatg ttggagcggc taaaactttc ggtgtcggcc
      301 ggcgccattc cgcgcgaggt gctggcgctc gattccttcg tcaccgactg caactcggtc
      361 gtcttcgatg tcgaccacga tttcgccggc tgcatccccg gctgccatga aattctgcgc
      421 cgtcagggcc tgatgacctc gatcgagtgt ctcgatccgc acgagacgtt gagtcccggc
      481 cagagtgccg gcatcgatcg cctttacgcg acctatcccg agctgaacga cgatgccttc
      541 gtcgcggcca atctcgagcg ctggcggaac tagaggtgga tgacctgttc gcgactcacg
      601 acgcgttcgc cgtcgcccaa ctggtcaaga cgcgcaagat cggcgcccgc gaggtgctcg
      661 acgggacact gaagaagctt cggacgatca acgcgtcgct gaacgccatc accgacttct
      721 acgaaggaga cctgctggag aaatcggtcg ctgcggcggg cgaggggccg ttccagggcg
      781 tgccttttgt cgtcaagcag ctcatggccg agtgcgccgg cacgccgacg acgctcggct
      841 cgcggttctt cgccaaacag cctgtggcgg cggctgatag cgcggccgtc gtccgtatgc
      901 ggcgtgccgg actggtgatc gtgggccgga ccaataccag cgagttcggt ttggcgccga
      961 ccaccgagcc ggctttcggc ggcgccacgg tgagcccgtg gcgcgaggat ctctctcccg
     1021 gcggatcgtc aggcggttcg gcggcggttg tggcggcgcg ttgcctgccg gtggcccatg
     1081 ccaccgacgg cggcggctcg atccgcattc cggcgtcact atgcgggctg ttcgggctaa
     1141 agccttcgcg cgggcgggtg agcttggccc ccatcggcga gaccctggcc ggcgcgggcg
     1201 cccagcattg cgtgtcgatc tcggtgcgcg acagcgccgc gctgctcgac gcgatcgcgg
     1261 gcggcgagcc cggcgatccc tatcgcgcgc cgccggcggg atcttttctg gcagcggtgc
     1321 agcgttcacc aggcaagttg cgcgtggcgt tcatgcgaaa gcccgtcggc ggggcgccga
     1381 tcgatcccgt gctggttgcc gccgtcgagc ggacggccag gctgctggaa gagctcgggc
     1441 atcatgtcga ggaagcggcg cccgactacg atgccgccgc gaccggcgcc gccttcggcg
     1501 tggtgatgtg cgccaacacc ttcaccaacc tccaggtgcg cgccggcggc cgcatcgcgg
     1561 ggccggacga tctcgagccg gcgacgcgcc ggcacgccga gattggccaa ggcatcagcg
     1621 cgcacgacta tatccgtgcc gtgcagacct tccaccgcac cggccgacag ctcggccaat
     1681 tcctggaaag gcacgacgta ctgctgtcgc ccaccatcgc gcgaacgcat ctgccattgg
     1741 gcgcggtcag gatggatggc tcactcgagc agtaccagga gagcctggcg ccgatggtgg
     1801 ccttcacgtc ggtgtgcaac gtcacgggcg cgccggcgat gtcggtgccg ctggcttgga
     1861 ccgacgacgg gctgccgatc ggcctgcact ttgtcgcccg cttcggggcc gaggagatgc
     1921 tgttttcgct ggccgccgag ctcgagcgcg cccagccgtg gcgggagcgt aggccatgac
     1981 cgattggatg cgaacagtgc tcgtgggctt catcgccggc gcggtgagtg tgctgatctt
     2041 tcatcaggcc ggcttctgga ttgccaacga gctgggctat acccgcgtgc cgctctacag
     2101 cctgcggccg ctgccgccgt ggaacgtgcc gaccattctc tcgcaggcct tctggggcgg
     2161 gctgtggggc gtcacggtcg cgttcctggt gccgcgcttg ccacggcccc tgaatggcgc
     2221 cctgggctgg atcctcttcg ccggcatcat cgtgacgctg gtcaactggt tcatcgtgct
     2281 gccgatcaag ggcctgccga tgggcaacgg ctttcgcatg cccgggccca tcgtgctgcc
     2341 gctggactac gcgctgtggg gtttcggcat gtggctgatc gccgggctga cgcgtcgcct
     2401 gttcggctgg cgctagggga gaggacatga agatcgtcga tgcccaggtc catatctggg
     2461 ccgccaacac accccaacgt ccgtggcccg cgcgcggcga gccgcaccgc gcaccgctcg
     2521 gcaaggacga gcttttagct gcaatggaca aggccggcgt cgacggcgtg gtcatcgtgc
     2581 caccatcatg ggagggcgac cgcaacgacc tcgccgtcga agcggcgacg gcgcatcccg
     2641 atcgcttctg catcatgggc cgcttcaacc ccgacgcacc cggcgcgcgc aagcagatcg
     2701 ccggttggaa aaagcacaag ggcatgctcg gcgtgcgctt cactttccac accgagattt
     2761 tgcgccagcc gttgatcgac ggccgcttcg actgggtgtg gggcgagatg gaaaaggcgg
     2821 gcatttccgc catggtgctg ttccatcacg aatacatgcc tctggccgac cggatcgccg
     2881 aacgctaccc gggcctgcgg ttggtgctcg accattgcgg actgaagagc ggcaaggacg
     2941 tcgccgaggc tgaaaacttc gccacactcg acaagatgct ggcgctcgcc aagcggtcca
     3001 acgtggcggc caaggtcaca gcgatgccat gctacgccga cgacaagacc tatcccttcc
     3061 gctccgtgca tccgcagatc cgccgcatct tcgacgcttt cggccccaaa cgcacgttct
     3121 ggggaaccga ctggtcgcgc ctcccttgca cttaccggca gggcatcacc atgttcaccg
     3181 aagagatgcc gtggctcaaa ggcgacgacc tggactcggt catgggccgc ggcgtgtgcg
     3241 agtggatcgg atggaggatt tgatgcttgg atcgaagcag accattccat tctggcagca
     3301 aaagaggcgg ctgctgaccc tcgaacgggc gttggcaccc gatcgcaagg acagcagcag
     3361 cagcgcgata acggcgcaag ccattgcaag agcacgggtc cgggatcgaa tggcggccgg
     3421 gtcgaagaag aaggcacggt tctccgagca ctgatcgccg tttgataata gttattggtc
     3481 gggctaagct gccgatgacc atggagggtc gcatggcgag cagcgttgac ctcggccgcc
     3541 aactggaaaa gttcgtctct tcgctcgtgt caagcggccg ctacaattcc aagagtgaag
     3601 tcctgcgcga gggcttgcgc cttctgcagg agcgggaaaa acggctggct gcactcgacc
     3661 tcgcgttgga tcgtggcttg gcagatgcaa aggcaggaaa gctcaaaccc gcggagcagg
     3721 tctttgcccg tctcgaggcc aagtatcgca agatggcgaa atccagggcg tgaaagttct
     3781 cttcaccgag gccgccgagt ccgacctcga ggtgatcggc gattggatcg caaaagacaa
     3841 tccggggaga gcggcgacct tcgtacggga attgcgccga tcctgtgtcg acatcggccc
     3901 acggccgctc ggttatccgc ttgtcgagca ccgtcgtaac gacggcatcc ggcgaaaagt
     3961 ccacggcaac cacctgatct tttatcgcat atggctcgat gccgtcgaaa tcctgcgtgt
     4021 gctccacggc gctcgtgact acgcccggat cctcttcagc gacaacgatt tagattagcc
     4081 gcgtcaccgt ctgcgaaccg ccgccccaga tcggcaggta ggtcatcttg tacccggcgc
     4141 cgccggtgac gatcggatgg atggcgtcgg gcgcgcgggc gacgccttgg ccctcgtcga
     4201 acatgtagcg ctgcacgcgt aagaggtccc aaccatcgtg gcggacgatc ttctgcgcca
     4261 tctccaatgg cagcaggacg acctgctcgc cgcgctcgtt cttgcggctc atgctcgaca
     4321 tgacgatggc ggcccgcatc gccgtcacga tcggcgagag aatggcctcg ggcgtggcgc
     4381 cttcgccgtc gccgggcaac acctcggcgg tgccggacac gcccatgacc gtgatggcgc
     4441 tggtgtccgc gccgagcccg cggcgtgacg tcaaggtcgg gaagggcccg tcgttgcgct
     4501 cggcgaagca cagcgtgtac ttgccgggct ggcccatggt cgccatgtcg ccgacctcgg
     4561 gccgggcgcc gccgatgttg cggatggtga gctgcaaggc gcggccgatg ctggcgttgg
     4621 cgcggttgcc gggccccagg caattggtgc cggcattgac gccaagctgg cgcgcgatcg
     4681 ggccgtgcac gcagagcgcc acgcaggccg tgccggtcgt ggtggcgacg cccaaaaggt
     4741 tgaaatcggc atcgagcgtc gcctcggccg cggccagcac caccggaagc tcggccggcc
     4801 ggcaaccggc gatgacgcat tgataggcga tcgattcggc cgtgatgtcg ccgaacatcg
     4861 gcggcatgag gctgcgcgat tcgctgcggc ccttgatgcc ggccaccatg gcgtcgagcc
     4921 ggcgcctggt cggcggtacc agcggcaggc cgtccgacaa ttcagcgtcg gtcaggatct
     4981 gttgtgcgct ctcccagccc gtctgctcat cgacgaccgg ccagccgcac cagtcactca
     5041 cggcgcgatt cgcaccgacg caacggtcgt gccgccgaag gacgggatga aggccgagtg
     5101 cttgcccggg cccccggcca cggtgatgtg gatgtcctgc ggcgtccgcg cgaccgtgaa
     5161 ccagtcgccg tccggcttgt ggccggtgct gatgtaggtc tcctggttct ccggcgaaat
     5221 ccgcgaggta tgcacgcgcg cgcgcttgtg cagttcctcc tggatgctct cgatggtgaa
     5281 gccgtcgcgt ttcagcgtcg cggcatgctc gggcccgatg atgacgaaca tcgggccttt
     5341 gccgtagacc gtgttggcgc ccggcgtcgc catgccgccg gcgaaggtcg tcagcaggcc
     5401 gatgccggtc gtgctgccgt ggtcgttgag gttgtgcgga ccctcgcccg acatcaccgt
     5461 gaccacgctg tcgctcggcg caaagccgcg gcgcacgtga tagggcgtcc agggattctc
     5521 ttcctcgttc tcgccgaagc agaaggtgaa cttggcggga ttgccctggg tcgagcggtc
     5581 catctcgccg ggcttggcgc cggcgatgtt caaaagcatc aggccgagcg cgcggccgat
     5641 cgtggcgttg gaccgccagc cctggccgaa gcaattggag ccgcaattga tgccgagctg
     5701 atggcggatc ggcccgctca ccatgaccat gggcgcgcag gagtgcgtgg tggcgagcgt
     5761 accgtgcaga ttgtagtcgg gatcgagcac cccgcgcatc gccgccgtca ccaccggaaa
     5821 gtattccggc ttgcagccgg ccatcaccgc gttggcggcg aggctcttca gggtcggcac
     5881 gatctggcgc ggcggcaccg gcgggtaggg ccggttgtcg ccgcgcaccg tgtcgacgaa
     5941 cctcgtcacc ttgtcctcgg tcgggatgta gagcggcatg ccgtcgctcc agccctgctc
     6001 ggtggcgtat tcgttgaacg cctcgacgtc gagatcgccg atctcgatga tctcctgctc
     6061 ggccgtgtcc gtcatgtctg ggtcgcctcg gacaatccct tggttgccgc ttcgatgcgt
     6121 tcacgcagtt cgtcggcgtt cagcccgccg atcggatgct tgaccacgat cagccgcggt
     6181 tcgaccttgc gtgccttggc ctgcgcgagc acgagcggct tgaacgtctc agtggcgatc
     6241 acgtaggccg tgatgccgcg cttctcgagt tcgatgctgt cgtggaaact ccacgatgaa
     6301 cagcttcctc aatcggcgat ggctaaaagc gctccccggt agttggccgc cacctgttcg
     6361 agcaggtcct tcggcgcggg ctggctggcg ctgttcttcg acaggaagtc gatattgtcg
     6421 actggccgga aggcgccgag tttcgagcgg atgccgtcta aaagctcgcg cgcgttgggc
     6481 ttggaattcg agaccagcgc gatggcgtcg ctcttccagt tgaccgattt caaggccacg
     6541 gtctcgccga cggcggcgga caggccgaag gtgggattga cgatgcgcat gctcgttgct
     6601 cctcaattcg ttttgccgag ggccaacacg acggcctgcg cggcacgctg gccatcggcg
     6661 atggcctcgg ccagggagtg ttgcgcgccg gcccgcacgt cgcccgcggc gaacgccgaa
     6721 gcagcggagg tgcggccccc ttcgtcgacc acgatatgcc cggtggcgtc gcgtgcaagc
     6781 gaatccggca cgaattccgc agcgggagac tggccgacat agacgaacac cgcgctggcc
     6841 ggaatggttt tccgcgcgcc cgcgctctcg accacgatcg cctgtagccc ttcgccgccc
     6901 tccaggccga cgatacggcc ctcgatatgc cggacaccct cgggcacttg ggccgcgacc
     6961 gtgtcgacga cggtgacttc gctggcaaat cccttcagct cgtcggcttc gtaggatgcc
     7021 cagccgccgg cgccggccac gacgaccggc tgtccggcat agagcgggcc gtcgcaagag
     7081 gcgcaatgcg aaaggccgcg tccttcgtac ttgtcctcgc cgggcaggcc gagccggccc
     7141 ttgccaaggc cggtggcgat cacgaccgcg cggccgctat gacgctcgcc ttcggcggtc
     7201 tccaccgtcc acggtccgct gccggacagg cgtacaactt cgccgaagcc gatctcggcg
     7261 ccggcggcgg tcgcctggtc ggtaagttgc gacgccatct gggggccgtc ggacgcctcc
     7321 gcgacaccgt gcagttggct gagattgatg aggacaccgc ctggcgccag cttgtcgagg
     7381 cagagcgtcc tgaggccggc acgcgcggcc tcagtggcgg cggcgaggcc ggcgggtccg
     7441 gcaccgatca cgatcacatc gaaagaggta tccatcggcg cactaataca cggggttaag
     7501 cgtgttgtcg cacagggcgc gtcgagaaat cgttgtcatc ccgggcccct atgtggtccg
     7561 cgatttgcac gcggatcatt ttgagatcgt ccattcaatt cctcccaaac cggtgaatag
     7621 ttcgcttgca cggcccgccg gaagcgtcgt aggtcgcagg gtaggggaaa cgcaagggca
     7681 tggcgtattt ttcgcaacaa ctgatcaacg ccatcacgct gggcgccatc tacggcctga
     7741 tcgccatcgg ttacacgatg gtctacggca tcatcggcat gatcaacttc gcgcacggcg
     7801 aagtgttcat gatcggcgcc ttcatctccc tgatcggctt catgatctgc agcctgctcg
     7861 gcatcggctc ggcgccggtg gcgatcgtgt tggtgttgtt gctcgccatg gctttctcgg
     7921 cggtctatgg ctgggcgatc gagcgcgcgg cctatcggcc gttgcgcggc tcgttccggc
     7981 tggcgccgct gatctcggcg atcggcgtgt cgattgcgct gcagaactac gtgcagctcg
     8041 tgcagggcgc gcggcccaag ccgggcggac agatcgtctc gggcggcttc agcctgttca
     8101 gcgccgacga cttcgacgtt cgcgtgagct ggctgcagat cattatcgtc gtggtcacgg
     8161 tcgtgctgat ggcgggcttc acctggctga tcgcctcgac gccgctcggc cgccagcagc
     8221 gcgcctgcga gcaggacatg aagatggcgg cgctgctcgg cgtcgacgtc gaccgcacca
     8281 tctcgttcac cttcgtgctg ggtgccgcgc tcgccgccgt cgccggcatg ctgttcctga
     8341 tgtactacgg cgtcatcgat ttcttcatcg gcttcctggc cggcataaaa gccttcaccg
     8401 ccgcggtgct gg
//
LOCUS       DASWGA010000824         5470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_733291, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000824 DASWGA010000000
VERSION     DASWGA010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5470
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_733291"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VF991_19320"
     CDS             <1..252
                     /locus_tag="VF991_19320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019444009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9558652.1"
                     /translation="FIAIGHSPNTELFKGKLAMDSEGYLLTKPDSTATDIDGVYASGD
                     VQDKIFRQAVTAAGTGCMAALEAEKWLARQEARVAEAAE"
     gene            256..1146
                     /locus_tag="VF991_19325"
     CDS             256..1146
                     /locus_tag="VF991_19325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX9558653.1"
                     /translation="MDWDKLRIFQAVADAGSFTHAGEGLKLSQSAISRQIGALEEQLG
                     VMLFHRHARGLILTEQGELLYRTARDMAGKVNTAEALLRANQDKPAGRLKIHATVGFG
                     STWLTAQMHEFITMYPDIDVSLVLSDNELDLGMREADVAIRMMMPRQPGLVQRHLLTV
                     RSHVYASHSYIQKYGKPQAVEELDQHRLIIFGEDARAPVQDVNWLLREGNVDQSGRVV
                     VLRVNNVYGIFRAVESGLGIASLPDYLARESTKIETVLTDLNVRTTDVYFTYPEELRH
                     SKRIAVFRDFLLRKVAETRF"
     gene            1517..2395
                     /locus_tag="VF991_19330"
     CDS             1517..2395
                     /locus_tag="VF991_19330"
                     /inference="COORDINATES: protein motif:HMM:NF039471.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6492 family protein"
                     /protein_id="HEX9558654.1"
                     /translation="MFSEVRQAILPLALRKMQRRGDLERAGLLIESLAKHWRDSKPFK
                     LLIVSPGGDTHLLRTSLPRFPNIDVSVRRESDFISPFSPFYMMTGWYRQQIIKLKVPA
                     VLGFGGYLTLDSDVCCVGDFDATTFVEDRRGLSRWEPKVHHDWWRNAAEVVGSSYDGK
                     GHGLSVTPNLLHGRLAAQTLEHVANGAQDATTSLLLWKARKLLGVPWTEYSLYTSVAE
                     LKGNLFDYHIDWNTCYAADVHLFSEQSCVWGADDFERLVKLPNGTDPGGKFIIVQSHA
                     RIPLERVREYCLSFAS"
     gene            complement(2399..3517)
                     /locus_tag="VF991_19335"
     CDS             complement(2399..3517)
                     /locus_tag="VF991_19335"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9558655.1"
                     /translation="MSQPLAGIKVVEFGQNLAGPYCGQILAFLGADVVKVERPEGDDA
                     RKWGPPFLAGDALGFIALNRGKRSITCDLADKAEREALIERIGLADIFVHNLRADVPA
                     QFGIDGAALTRRFPRLIYADLGAFGHLGPWKDRPGYEPIIQAVAGLISLNGDPAGPEA
                     RIGVSIIDLSTGMWTAIGVLAALARRAATGRGSLVNTSLFESGLMWASNHVASYSVTG
                     RMAERQGTGHPSLTPYQAFECSDGPLMVCPGNDRLWRKFAEALGHPEWPDEPRFKTNV
                     ERMQHRDLLLGMIAGIMKGESRAHWSARLDALGVPNGPLNTVPQVLELAQTAALDMFA
                     KPYAGSGALFHGLPVSFDGVRAGGSDVAPKIGEHSGRE"
     gene            complement(3514..4680)
                     /locus_tag="VF991_19340"
     CDS             complement(3514..4680)
                     /locus_tag="VF991_19340"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9558656.1"
                     /translation="MDFEPSSEQQMLIDQVRRYVREEIIPLEAKLDPDAAELDPADHA
                     RLVEKTKAMGLFGIDIPKQFGGPDIDIVTRVLLAIEMAQHRAGLYAPCYGTFGGAGLA
                     QIFEANEDQKQRYLYPTLRGEKKPFFGLTEPSGGSDPARAIQTRAERKDNGWVLNGAK
                     LFISGADRAQYGIVFARTDASKGRGGITCFIVDADTPGFYVRRVVHTLRSSSYATELE
                     FKDCWVSDHQVLGEVNKGFAVANDRLTRQRIPYAAGCIGVAIAAHEMAIEWAKMRSTF
                     GEKLANRQAVQWMLVDNEIDIRSARHFTLEAAEKARRGLPFRTEAAIAKLIASEGGGR
                     VVDRSMQIHGGMGMTKDLPLERWYREMRIRRVGEGPSEVQRMVIAREILGSNLR"
     gene            complement(4834..5169)
                     /locus_tag="VF991_19345"
     CDS             complement(4834..5169)
                     /locus_tag="VF991_19345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558657.1"
                     /translation="MRLRLDKPWRPLTAEEAARLPGQLGVYQVADAQGTIVYIGQAGA
                     RSPFGLRSELQREARERGAGHQFRVEVNQQYRTRWFELLMVHKAEHGSLPPDNAKNPP
                     PALGRLSPA"
     gene            complement(5177..>5470)
                     /locus_tag="VF991_19350"
     CDS             complement(5177..>5470)
                     /locus_tag="VF991_19350"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9558658.1"
                     /translation="LGEPLPSTKLYALGLIARCVPADQLEAEASKVIDRLAANAPLSL
                     KAMKALTVRQLEFRDAIKHDDVDALVRAAMQSQDAQEGMKARLEKRTAKFQGK"
BASE COUNT          890 a         1804 c         1795 g          981 t
ORIGIN      
        1 ttcatcgcca tcggccattc gcccaacacc gagctgttca agggcaagct cgccatggat
       61 tcggagggct acctcctcac caagcccgac tcgacggcca ctgacatcga cggcgtctat
      121 gcctccggcg acgtgcagga caagatcttc cgtcaggcgg tcaccgccgc cggcacgggc
      181 tgcatggctg cgctggaggc agagaaatgg ctggcgcgcc aggaggcgcg cgtcgccgag
      241 gcggcggagt agggaatgga ctgggacaag ctgcggatct tccaggcggt cgcggacgcc
      301 ggcagcttca cgcatgccgg cgaggggctg aagctcagcc agtcggcgat ctcgcgccag
      361 attggtgcgc tcgaggagca gctcggcgtc atgctgttcc accgccatgc gcgcggcctc
      421 atcctgaccg agcagggcga gttgctctat cgcaccgcgc gcgacatggc gggcaaggtc
      481 aacaccgccg aggcgctgtt gcgcgccaac caggacaaac cggccggccg gctcaagatc
      541 cacgctacgg tcggcttcgg ctcgacctgg ctcaccgccc agatgcacga attcatcacc
      601 atgtatccgg atatcgacgt cagcctggta ctgtcggaca acgagctcga tctcggcatg
      661 cgcgaagccg atgtcgccat ccgcatgatg atgccgcgcc agcccggcct ggtgcagcgc
      721 catctcctga cagtgcgcag ccacgtctac gcctcgcaca gctacatcca gaagtacggc
      781 aagccgcagg cggtcgagga gctcgatcag caccgtctga tcatcttcgg cgaggatgca
      841 cgggcgccgg tgcaggacgt caattggctg ctgcgcgaag gcaatgtcga tcagtcgggc
      901 cgcgtcgtgg tgctgcgggt caacaacgtc tacggcattt tccgcgccgt cgaatcgggc
      961 ctcggcatcg cctcgctgcc ggactatctg gcccgcgaat cgaccaagat cgagaccgtc
     1021 ctgacggacc tgaatgtccg cacgaccgat gtgtatttca cgtatcccga ggagctgcgc
     1081 cattccaagc gcatcgccgt ctttcgcgat ttcttgttgc ggaaggtcgc ggagacacgg
     1141 ttttaactgc cagatgtgca ggactgcaca gccagtgaaa ggcatgcgct catcgcatgc
     1201 cagtctccgg aaatcccccc ctagcaatgg cgcccttgag gaataggttg gcgtcaggtc
     1261 ttcgacacga gcggtttcgg ctgatcgcgt tgaaactcgg gatcctcatg atcccacgtc
     1321 tcccagacgt gaagcctccc tgtttgactc gccgggcctt agggcccggc ttcttttttc
     1381 gtgcaatccc ctgcagttca tcaacctttg cctgtgtggg acgttctgcc gctggtaggt
     1441 cgcatcacgg gcgacatcca tcgattgatg tggaacgctt gcgataccac atgtattttc
     1501 agagccaacc aagacgatgt tttccgaagt ccgccaagcc attctccctc tggctctgcg
     1561 caaaatgcag cgccggggcg atttggagcg cgcgggtctc ttgatcgaat cgctggccaa
     1621 gcactggcgc gattccaagc cgttcaagct gctgatcgtc tcgccgggtg gcgatactca
     1681 cctgttgcgc actagtttgc cgcgctttcc caatatcgac gtctcggtcc ggcgggagag
     1741 cgatttcatc tcgccgttca gccctttcta catgatgacc ggctggtacc ggcagcagat
     1801 catcaagctc aaggtgccgg ccgtgctggg cttcggcggc tatctgaccc tcgattcgga
     1861 cgtctgctgc gtcggcgact tcgatgcgac gacgttcgtc gaggatcgcc gcggcctgtc
     1921 gcgctgggaa cccaaggtgc atcacgattg gtggcgcaac gccgccgagg tcgtgggctc
     1981 gtcgtacgat ggcaagggcc acggcctgtc ggtgacgccc aacctgctgc acggcaggct
     2041 cgcggcgcag acgctggagc acgtcgccaa cggcgcgcag gacgccacga cgtcgctgtt
     2101 gctgtggaag gcgcgcaagc tgctcggcgt gccgtggacc gagtattcgc tctacaccag
     2161 cgtcgccgaa ctgaagggca acctgttcga ctatcacatc gactggaaca cctgctacgc
     2221 cgccgacgtg cacctgttct ccgagcaatc ctgcgtgtgg ggcgccgacg acttcgagcg
     2281 cctggtcaag ctgcccaacg gcaccgatcc gggcggcaaa ttcatcatcg tccagagcca
     2341 tgcgcgcatt ccactggagc gcgtccgcga gtactgcctg agcttcgcga gttagggttc
     2401 actcccggcc gctatgctcg ccgatcttcg gcgcgacgtc ggatcctccc gcccgaacgc
     2461 cgtcgaaact gaccggcagg ccgtggaaca acgcgcctga gccggcgtag ggcttggcga
     2521 acatgtcgag cgcggccgtc tgcgccagct cgagcacctg cggcaccgtg ttgagcggac
     2581 cgttgggcac gcccagcgca tcgagcctgg ccgaccaatg cgcgcggctc tcgcccttca
     2641 tgatcccggc aatcatgccg agcagcagat cgcgatgctg catgcgctcg acattggtct
     2701 tgaagcgcgg ctcgtcgggc cattcgggat ggcccagcgc ctcggcgaac ttgcgccata
     2761 gccggtcgtt gccgggacag accatcagcg gcccgtcgct gcactcgaag gcctggtagg
     2821 gcgtgagcga gggatggccg gtgccctgac gctccgccat gcgtcccgtc accgaatagg
     2881 acgcgacatg gttggacgcc cacatcagcc cgctttcgaa cagcgaggtg ttgaccaggc
     2941 tgccccgacc ggtggccgcg cgccgggcca acgccgccaa aacgccgatc gccgtccaca
     3001 tgccggtcga cagatcgatg atcgagacgc cgatgcgtgc ctccgggccg gcgggatcgc
     3061 cgttcagcga gatcagcccc gccaccgcct ggatgatcgg ctcgtagccc ggccggtcct
     3121 tccacgggcc gaggtggccg aacgcgccca ggtcggcata gatcagccgc ggaaaacgcc
     3181 gggtgagcgc agcaccgtcg atgccgaact gggccggcac gtcggcccgc agattgtgca
     3241 cgaagatgtc ggccaacccg atgcgctcga tcagagcctc gcgttcggcc ttgtcggcga
     3301 ggtcgcaggt gatcgacctc ttgccgcggt tgagcgcgat gaagcccagc gcatcgccgg
     3361 cgagaaaagg cggtccccat ttgcgcgcat cgtcgccctc cggccgctcg accttcacga
     3421 catcggcgcc caggaaggcg aggatctggc cgcaataggg gccggccagg ttctggccga
     3481 actcgacgac ttttatgcct gcgagaggct ggctcatcgc aggttgcttc ccaggatctc
     3541 gcgcgcgatc accatacgct gcacctcgct cggtccctcg ccgacgcgcc ggatgcgcat
     3601 ttcgcgatac cagcgctcga gcggcaggtc cttggtcatg cccatgccgc catggatctg
     3661 catcgagcgg tcgacgaccc ggccgccgcc ctccgaggcg atcagcttgg cgatggcggc
     3721 ctcggtgcgg aagggaagcc ctcgacgggc cttctcggcg gcctcgaggg tgaaatggcg
     3781 ggcgcttcgg atgtcgatct cgttgtcgac cagcatccat tgaacggcct ggcggttggc
     3841 gagcttctcg ccgaaggtgc tgcgcatctt ggcccattcg atcgccattt cgtgcgcggc
     3901 gatggcgacg ccgatgcagc ccgcggcgta gggaatgcgc tggcgcgtca gccggtcgtt
     3961 ggcgacggcg aagcccttgt tgacctcgcc cagcacctgg tggtccgaca cccagcaatc
     4021 cttgaattcg agctcggtgg cgtagctcga ggaacgcagc gtgtgcacga cacggcgcac
     4081 gtagaaccct ggcgtgtcgg catcaacgat gaagcaggtg atgccgccgc gtcctttcga
     4141 ggcgtcggtg cgggcgaaca cgatgccgta ctgcgcgcgg tcggcaccgg agatgaaaag
     4201 cttggcgccg ttcagcaccc aaccattgtc cttgcgctcg gccctggtct ggatggcgcg
     4261 cgccggatcg ctgccgcccg acggctcggt cagtccgaag aacggcttct tctcgccgcg
     4321 cagggtggga tagaggtagc gctgcttctg gtcctcgttg gcctcgaaga tctgcgccag
     4381 gccggcgccg ccgaacgtgc cgtagcacgg cgcgtagagc ccggcgcgat gctgggccat
     4441 ctcgatcgcc agcaggacgc gggtgacgat gtcgatgtcg ggcccgccga actgcttggg
     4501 gatgtcgatg ccgaacaggc ccatcgcctt ggtcttttcg accaggcgcg cgtggtcggc
     4561 aggatcgagt tcggcggcgt cgggatcgag cttggcctcg agcggaatga tctcctcacg
     4621 cacgtagcgg cggacctggt cgatcagcat ctgctgttcg gagctgggct cgaaatccat
     4681 gggcgtttcc tcagtatgac ccgaccgtca cctcatattc ctctcccccg ctggggcgag
     4741 aggttaggtg agggggcagc gacgggtgta acccgctcac ccagcctctc cccctagcgg
     4801 gggagaggag gaagaggcgg ttgtcgttaa tgttcatgcc gggctcagcc tgcccaaggc
     4861 aggcggcggg ttcttggcgt tgtcgggcgg taggctgccg tgttcggcct tgtgcaccat
     4921 caggagctcg aaccagcgtg tgcggtactg ctggttcacc tcgacccgga actggtggcc
     4981 ggcgccgcgc tcgcgcgcct cgcgttgcag ctcgctgcgc aggccgaagg gtgagcgggc
     5041 gccggcctgg ccgatataga cgatggtgcc ctgggcatcg gcgacctggt agacgccgag
     5101 ctggccgggc aggcgcgcgg cttcctcggc ggtgagcggc cgccacggct tgtcgaggcg
     5161 cagccgcatc gccacgctac ttgccctgga acttcgcggt gcgcttctcc aggcgggcct
     5221 tcatgccctc ctgggcgtcc tggctctgca tcgccgcccg caccagcgcg tcgacgtcgt
     5281 cgtgcttgat ggcgtcgcgg aactcgagct ggcgcacggt gagcgccttc atggccttga
     5341 gcgacagcgg cgcgttggcc gccaggcgat cgatcacctt gctcgcctcg gcctcgagct
     5401 ggtcggccgg cacgcagcgg gcgatcaggc ccagagcata gagcttggtc gacggtagcg
     5461 gctcgcccag
//
LOCUS       DASWGA010000825         1851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_985787, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000825 DASWGA010000000
VERSION     DASWGA010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_985787"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="VF991_19355"
     CDS             <1..410
                     /locus_tag="VF991_19355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HEX9558659.1"
                     /translation="RVRYVAGMFDGYSETGSAQGLSVGRRTLQDFEERGELDVSRVTT
                     FFGGDHSLKTNLHGGVIALQRAGDTTINAVLIGQNLAFATPGSGSTVGWVAGAGFDYH
                     TNKNVALFGAVEGTMMSDQSRTITAKGGLRAAF"
     gene            804..>1851
                     /locus_tag="VF991_19360"
     CDS             804..>1851
                     /locus_tag="VF991_19360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558660.1"
                     /translation="MKSAKPKLLTGRRALMLAVTIAALAAIDRAEANCDRVTSSASPL
                     INQTVNCIGTTTQNGTTGFGVAEDIGNTINVGSEVQPKASVTGTNVGIQITGSGDFAN
                     DTETVNNFGTISGAFGIAGSSGKVNNKAGATISGTGTGSGFDGFGIQILATGVVANSG
                     TISGTNRGVQIQNGTVTNMSGGAISGGFIGVEILDNGTTGNPALFNAGTIKGGTFAVS
                     FLSVNGFPGELINSDLISATGTAGVAVSFGSSGTVTNSHMIQATATGGIAIQAAGTVT
                     VNNSIGGLITGDKFAVNAATVNVTGNAGTIEATGRDGVAIHDSTVNFTGTVNVTGNAG
                     AIQATGTFGIGIKAG"
BASE COUNT          386 a          572 c          564 g          329 t
ORIGIN      
        1 cgcgcgtgcg ctatgtcgca gggatgttcg acggctactc tgagaccggt tcggcgcagg
       61 ggctatcggt cggccgccgc acgctgcagg atttcgagga acgcggcgag ctcgacgtgt
      121 ccagagtgac gacgttcttc ggcggcgatc acagcttgaa gaccaatctg catggcggcg
      181 tgatcgcgct gcagcgggca ggcgacacca ccatcaacgc cgtcttgatc ggccaaaacc
      241 tcgccttcgc gacgccgggc agcggcagca ccgtcggctg ggtcgccggc gccggcttcg
      301 actatcacac caacaagaac gtcgcgctgt tcggcgcggt cgagggcacg atgatgtcgg
      361 accagagccg caccatcacc gccaagggcg gcctccgcgc cgcgttctga gatcgaagag
      421 aaggctcaag tgcgatagct gatatcgcct gccagggcga tgcgctgcga tgggacgatc
      481 gtcgcagcgt tgccccgtgt cccgttctca tcatgcccga tccgaagcat tggatatcaa
      541 tgacgggccc gtgtcatcgt tccagcctga cgcttgcgtc aatcgggtcg cgtggttcca
      601 tcacgacaac ggttgagccg atccggccgc gacggcgcaa gttcgtgtcg caaaattgca
      661 tcagccgccg acaatagcgc gactgtgcat ttgggtccaa gccgcccgcg cctccgtcca
      721 agtcctgaat cgccaaccca tctactcagt tggtcgacgt cggcgacacg ccgaactgag
      781 tctggcctgg gctggagatg ataatgaagt cggcgaaacc gaagctgttg acgggacgac
      841 gcgcgctgat gctggcggtg acgatcgcgg cgttggcggc gatcgatcgg gccgaggcga
      901 actgtgatcg ggtcacctcg tcggcgagcc cgctcatcaa ccaaaccgtc aactgcatcg
      961 gcacgaccac ccagaacggc accaccggtt tcggcgtcgc agaggatatt ggcaacacca
     1021 tcaacgtcgg gtctgaagtc cagcccaagg cgtcggtgac tggaacaaac gttgggatcc
     1081 agataactgg cagtggtgat tttgctaacg acaccgaaac cgtcaacaat ttcggcacca
     1141 tttcgggggc gttcggcatc gccggttcca gcgggaaagt gaacaacaag gccggcgcca
     1201 ccatttcagg gacagggaca gggtcggggt ttgacgggtt cggtatccaa atccttgcta
     1261 cgggcgtcgt ggccaactcc gggacgattt caggaactaa ccgcggcgtt caaattcaaa
     1321 acggcaccgt gaccaacatg agcggcggcg cgatttcagg tgggtttatt ggtgttgaga
     1381 ttctggacaa tggtacaacc ggcaaccccg ctttattcaa tgccggcacc atcaagggcg
     1441 gcacattcgc ggttagcttc cttagtgtaa atggcttccc cggcgaattg atcaacagcg
     1501 acctcatctc ggcgacgggt acggccggcg tcgccgtctc ctttggcagt tcaggcaccg
     1561 taaccaattc ccacatgata caagcgaccg ccaccggcgg catcgcgatc caggcggctg
     1621 gcactgtcac cgtgaacaat tccattggcg gcctcatcac gggcgacaaa ttcgccgtca
     1681 atgccgcaac cgtcaatgtc accggcaatg ccggcacgat agaagcaacg ggcagggatg
     1741 gggtcgccat ccacgacagc accgtcaact tcaccggtac cgtcaacgtc accggcaacg
     1801 ccggcgcgat acaagcgacc ggcacgttcg gcatcggcat taaagccggc a
//
LOCUS       DASWGA010000826         3512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2236114, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000826 DASWGA010000000
VERSION     DASWGA010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3512
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2236114"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..367
                     /locus_tag="VF991_19365"
     CDS             <1..367
                     /locus_tag="VF991_19365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017994997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9558661.1"
                     /translation="VLAQIGFVVLVGLAAKNAILIVEFARQAEEDGATPSAAAVSAAR
                     TRLRPILMTSLAFILGVVPLVVATGAGAEMRQSLGTAVFSGMLGVTAFGLLFTPAFYT
                     VVRKFGRKTAQPAKAAPVT"
     gene            complement(429..812)
                     /locus_tag="VF991_19370"
     CDS             complement(429..812)
                     /locus_tag="VF991_19370"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX9558662.1"
                     /translation="MSGWRRILFNRFVLVPAAIVLVVAVWNVYVATHNHGLITGRVVD
                     SAGRPVADATVALWVFNFTTYEEKERVKTDADGVFRFTNNPSHKIQLSAEKPGVGRSP
                     RIPVFLYFRAQDTTLDSPLRFTGAG"
     gene            complement(817..1629)
                     /locus_tag="VF991_19375"
     CDS             complement(817..1629)
                     /locus_tag="VF991_19375"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9558663.1"
                     /translation="MHRYPRWPVHLALMLAGFVMLVPFYWVLKTSVSGENIYAYPPSI
                     VPANVNPFYYVDVWYAIPFARYFLNSVAVSLIAVAGNVVFNAMAGYALSHGFRGRNLV
                     LVLFLSCMMVPFQATIIPAYLITGQLGLLDSWLGLALPQCSTIVCIFVFKASFDAVPR
                     SLIDAARIDGLSEWRIIWHIMMPLSKSAIATNVILAFIWSWNNFLWPLIMTRSADMQT
                     LPLGLARFLSYQEDTTGALYAFCIMVLAPSLLLFLLAQKEFIRGLTSGATKG"
     gene            complement(1629..2561)
                     /locus_tag="VF991_19380"
     CDS             complement(1629..2561)
                     /locus_tag="VF991_19380"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9558664.1"
                     /translation="MAVAVDSVRPRARARIRYRTRRALLFWCFLAPSLAIFLLYRIIP
                     VVWNLVLSFQYWSPLKEAEPAGFDHYEDLWTDDVFWQALWNTLIVIASAPVGIVIALA
                     LALLVNADIRGRDVYRTIIFLSYPLMTVAVAIIWRWMFDERVGLINYAARAFDLVDKP
                     IPFLNSFTWALPSVIAANIWQMLGFYMIILLTGLQNIPPELHEAAAIDGAGAVHRFRR
                     ITLPLLRPAIFLAFVIGMLNSITSFDLVYVMTGGGPGRATEILVTYIYKLGFVQTKFD
                     DAAAVTVVFFVLLIATTWLANRLAGGNVGAAETE"
     gene            complement(2622..>3512)
                     /locus_tag="VF991_19385"
     CDS             complement(2622..>3512)
                     /locus_tag="VF991_19385"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9558665.1"
                     /translation="ADYLNGWVYQGKTYLLPFYVAKTLLYYNKTMFKEAGLASPPQSF
                     GELVGFSEKMAKAEKTGFLTLNFDWLYWPLFKMNGVELLSPDGKKAAFNTPPAVDALT
                     QLAKATASGGINKISWTGRWVEPNGAFASGTVGMLHAHSASYFFVKGQGPWINDQTLG
                     AAEAPGFWSTPTNHGFAISKGSKNPDLAWSFIKFMTSDKCASAFFKTRSVLTANVAAD
                     KEGLAALEKTEPLAAAVLKTQIAHTDKLTGNWPLPYDAELKDTFWPEIQNAALGRKDA
                     KTALADAERAVNRLLSRKKA"
BASE COUNT          679 a         1055 c         1181 g          597 t
ORIGIN      
        1 tgtcctggcc cagattggtt ttgttgtgct ggtgggccta gcagccaaga atgcgattct
       61 gattgtggag ttcgcccggc aggctgaaga agatggcgct acgccaagtg cagcggccgt
      121 cagcgccgcg cgcacgaggc tccggccgat tctcatgaca tcgcttgcgt ttatcctggg
      181 cgtcgttccg ctcgtggtcg ccacgggcgc gggcgccgag atgcggcaat cacttgggac
      241 cgccgtcttc tccggcatgc tgggcgtgac cgcgttcggt ctcctgttca cgccggcctt
      301 ctataccgta gtccgcaagt tcggccgcaa gacagcccag cctgcgaaag ccgctcctgt
      361 aacctgaggc caatcggttc caagccttaa gcgattcgta gtctagagtg atcatagagt
      421 cgttctcatc aacctgcgcc agtgaatcgc aacggcgagt cgagcgtcgt gtcctgggct
      481 ctgaaataga gaaagaccgg tatgcgcgga gagcggccga cgcctggctt ctcggcgctg
      541 agctggatct tgtgcgacgg attgttggtg aagcggaaga cgccgtcggc gtcggtcttc
      601 acccgctcct tctcttcata ggtcgtgaag ttgaacaccc acagcgccac ggtcgcgtcg
      661 gccactggac ggccggcgga gtcgacgacg cggccggtga tgaggccgtg attgtgcgtg
      721 gcgacgtaga cgttccagac ggcgacgacg agcacgatcg cggccggcac gagcacgaag
      781 cggttgaaca ggatgcgccg ccagccgctc atggcgtcat cccttggtgg cgccggaggt
      841 gagaccgcgg atgaactcct tctgcgccag caggaagagc agcaggctgg gcgccagcac
      901 catgatgcag aaggcataga gcgcgccggt cgtgtcctcc tggtaggaca ggaaccgcgc
      961 cagcccgagc ggcaaggtct gcatgtcggc cgatcgcgtc atgatcagcg gccacaggaa
     1021 attgttccag gaccagatga aggccaggat gacgttggtg gcgatggccg atttcgacaa
     1081 tggcatcatg atgtgccaga tgatgcgcca ttccgacagc ccgtcgatgc gcgcggcgtc
     1141 gatcaaggag cgcggcacgg cgtcgaagct cgccttgaag acgaagatgc agacgatggt
     1201 cgagcactgc ggcagggcga gccccagcca ggaatcgagc agccccagtt gcccggtgat
     1261 gagataggcc gggatgatgg tcgcctggaa cggcaccatc atgcacgaca ggaacagcac
     1321 caggacgagg ttgcggccgc gaaagccgtg gctcagcgca tagcccgcca tggcgttgaa
     1381 gacgacgttg cccgccacgg cgatcagcga gacggcgacg ctgttcagga aatagcgcgc
     1441 gaacggaatg gcgtaccaga catcgacata atagaaaggg ttgacgttcg ccggcacgat
     1501 cgagggcgga taggcataga tgttctcgcc cgatacgctg gtcttcagca cccagtagaa
     1561 cggcaccagc atgacgaagc ccgccagcat cagtgcgagg tgaaccggcc agcgcggata
     1621 gcggtgcatc actcggtttc cgccgcgccc acattgccgc ccgccaggcg attggccaac
     1681 caggtcgtgg cgatcagcag cacgaaaaag accacggtga ccgcggcggc atcgtcgaac
     1741 ttggtctgca cgaagcccag cttgtagatg taggtgacga ggatctcggt ggcccgcccg
     1801 ggaccgccgc ccgtcatgac gtagacgagg tcgaaactgg tgatcgagtt cagcatgccg
     1861 atcacgaagg cgaggaagat cgcgggtctc agcaacggca aggtgatgcg gcgaaagcga
     1921 tgaaccgcgc cggcgccgtc gatcgccgcc gcctcgtgca gctccggcgg aatgttctgc
     1981 aggccggtga gcaggatgat catgtagaag cccagcatct gccagatatt ggcggcgatc
     2041 accgacggca gcgcccaggt aaacgaattg aggaacggga tcggcttgtc gacgaggtcg
     2101 aaggcgcgcg ccgcatagtt gatgaggccg acccgttcgt cgaacatcca gcgccagatg
     2161 atggcgacgg cgacggtcat caggggatac gacaggaaga tgatggtgcg atagacgtcg
     2221 cggccgcgga tgtcggcatt gaccaggagc gccagcgcca gcgcgatcac gatgccgacc
     2281 ggggcgctgg cgatgacgat cagagtgttc cacagcgcct gccagaacac gtcgtccgtc
     2341 cagagatcct cgtagtggtc gaagcccgcc ggctccgcct ccttgagcgg cgaccagtac
     2401 tggaacgaca ggacgagatt ccagaccacc ggaatgatgc ggtagagcag aaagatggcg
     2461 agcgacggcg cgaggaagca ccagaacagg agggcccgcc gcgtccggta gcggatgcgt
     2521 gcccgagctc gtgggcgcac ggagtcgacg gctacggcca tcgctgaggg tggcgcgtca
     2581 tgagaagatc gcgccactgg agtggcgcgc cccacgcaac atcacgcttt cttccgcgac
     2641 agcaggcggt tgaccgcgcg ctcggcgtcg gcaagcgccg tcttggcgtc ctttcggccc
     2701 agggccgcgt tctggatctc cggccagaac gtatctttca gctcggcatc gtagggcagc
     2761 ggccagttgc cggtgagctt gtcggtgtgg gcgatctggg ttttcaggac ggcggcggcc
     2821 agcggctcgg tcttctccag ggccgccagg ccctccttgt cggccgcgac gtttgccgtc
     2881 agcacgctcc gcgtcttgaa gaaggccgag gcgcatttgt cgctggtcat gaatttgatg
     2941 aagctccagg cgaggtcggg attcttggac cccttggaga tggcgaagcc gtggttggtc
     3001 ggcgtcgacc agaagcctgg cgcctcggcg gcccccagag tctgatcgtt gatccacggc
     3061 ccctggccct taacgaagaa ataggacgcc gagtgcgcat gcagcatgcc gaccgtgccc
     3121 gaggcgaagg cgccgttggg ctcgacccag cggccggtcc acgagatctt gttgatgccg
     3181 cccgacgccg tcgccttggc aagctgcgtc agcgcatcca ctgccggcgg cgtgttgaag
     3241 gccgccttct tgccgtcggg cgacagcagc tcgacgccgt tcatcttgaa caacggccag
     3301 taaagccagt cgaagttgag cgtcaggaag ccggtcttct ccgccttcgc catcttctcg
     3361 gaaaagccta caagctcgcc gaagctctgc ggcgggctgg ccagccccgc ctccttgaac
     3421 atcgtcttgt tgtaatagag cagcgtcttg gcgacgtaga acggcagcag gtaggtcttg
     3481 ccctggtaga cccagccgtt gagatagtcc gc
//
LOCUS       DASWGA010000827         2008 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_95339, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000827 DASWGA010000000
VERSION     DASWGA010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95339"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..1266)
                     /locus_tag="VF991_19390"
     CDS             complement(43..1266)
                     /locus_tag="VF991_19390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9558666.1"
                     /translation="MDFNDTPQEAAFRKEVRAWLDANATRKSDDKQSFRARNDDPELL
                     RKAKEWQDKKAAAGYARITWPKEYGGRGGSPILQVIYQQEEANYLVPLGFFDIGLGMC
                     IPTMMAYAAPEHLKRYVKPALHGQEVWCQLFSEPAAGSDVAGIRTRAERDGEGWVING
                     QKVWTSGAHYSDYGIIITRTDPNVPKHAGLTMFFLSMKTPGVEVRPIKQMSGGANFNE
                     VFFTDVRIPDSQRLGKVGEGWKAALTTLMNERLAVGLPSGGLDVDELMELARDTELED
                     GPAIRNQQVRGKIADWYVQQQGLKLTRYRTLTALSKGQTPGPESSIIKIVAAPKMQDM
                     GAFAMELMGPAGIMKEEVPHAAGFQAQWIGGAGFRIAGGTDEIMRNIVAERVLGLPAD
                     IRVDKDVPFNKLGKG"
     gene            complement(1390..>2008)
                     /locus_tag="VF991_19395"
     CDS             complement(1390..>2008)
                     /locus_tag="VF991_19395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9558667.1"
                     /translation="GQGDRAVSLVLVDLKQSAVSRKRVETIDPARKHAELTFKDAAAE
                     LLGAEGEGWRLLERLYDAAAVYFAFAQVGGAEAAMWMARDYALQRRAFGRAIGSYQAI
                     KHKLADCYVKLELARSNAYYGAMMLTDGGADLPLAAAAARIAATEAYDFASKENIQTH
                     GGIGFTWEADTQFHYRRARVMALSLGGPMAWKDKLVTRLEQKNVT"
BASE COUNT          293 a          694 c          649 g          372 t
ORIGIN      
        1 caagcggcga tgaggtcctt cgctgcgctc aggacgacag cttcagccct tccccaactt
       61 gttgaacggc acgtccttgt cgacgcggat gtcggccggc aggccgagca cgcgctcggc
      121 cacgatattg cgcataatct cgtcggtgcc gccggcgatg cggaagccgg cgccgccgat
      181 ccactgcgcc tggaagcccg cggcgtgcgg cacctcctcc ttcatgatgc cggccgggcc
      241 catcagctcc atggcgaagg cgcccatgtc ctgcatcttg ggcgccgcca cgatcttgat
      301 gatcgaggat tctggcccgg gcgtctggcc cttggagagc gcggtgagcg tgcgatagcg
      361 cgtgagcttc agcccctgct gctggacgta ccagtcggcg atcttgccgc gcacctgctg
      421 gttgcggatc gccggtccat cctcgagctc ggtgtcgcgc gccagttcca tcagctcgtc
      481 gacatcgagg ccgcccgacg gcaggccgac cgccagccgc tcgttcatca gcgtggtgag
      541 cgccgccttc cagccctcgc cgaccttgcc cagccgctgg ctgtcgggga tgcgcacgtc
      601 ggtgaagaac acctcgttga agttggcgcc gcccgacatc tgcttgatcg gccgcacctc
      661 gacgcccggc gtcttcatcg acaggaagaa catggtgagg ccggcgtgct tgggcacgtt
      721 gggatcggtg cgggtgatga tgatgccgta gtcgctgtaa tgcgcgcccg aggtccacac
      781 cttctggccg ttgatcaccc agccctcgcc gtcgcgctcg gcgcgggtgc ggatgccggc
      841 cacgtcggag cctgccgccg gctcggagaa aagctggcac cacacttcct ggccgtgcag
      901 cgccggcttg acgtagcgtt ttaggtgctc gggcgcggcg taggccatca tggtgggaat
      961 gcacatgccc agcccgatgt cgaagaagcc gagcggcacc aggtagttgg cctcttcctg
     1021 ctggtagatc acctgcagga tgggcgagcc gccgcggccg ccatattcct tgggccaagt
     1081 gatgcgcgca tagccggcgg cggccttctt gtcctgccat tccttggctt tcctcagcag
     1141 ctcgggatcg tcgttgcgcg ccctgaaact ctgcttgtcg tcgctcttgc gcgtggcgtt
     1201 ggcgtcgagc caggcgcgta cttccttgcg gaacgcggct tcttgcggcg tgtcgttgaa
     1261 atccatgact tcctccaaaa atccggcatc ccgaccggag cgaagcggag tggagggacc
     1321 ttttcatgtg actggcgcca tatgactcgg tccctccact acgggcctgc ggccctccgg
     1381 tcgggatgac tacgtcacat tcttctgctc cagcctcgtc accagcttgt ccttccaggc
     1441 catcggcccg cccagcgaca gcgccatcac gcgcgcgcgc cggtagtgga attgcgtgtc
     1501 ggcctcccag gtgaagccga tgccgccatg ggtctggatg ttctccttcg aggcgaagtc
     1561 gtaagcctcg gtcgccgcga tgcgcgccgc cgccgccgcc agcggcaggt cggccccacc
     1621 gtcggtcagc atcatggcgc cgtaataggc gttggaccgc gccagctcga gcttcacata
     1681 gcagtcggcg agcttgtgct tgatcgcctg gtaggagccg atggcgcggc cgaaggcccg
     1741 gcgctgcagg gcgtagtcgc gcgccatcca catcgccgct tccgcgccgc ccacttgcgc
     1801 gaaggcgaaa tagacggcgg cggcatcgta gagtcgctcc agcagccgcc agccctcgcc
     1861 ctcggcgccc aaaagctcag ccgcagcgtc cttgaaggtg agctcggcat gcttgcgcgc
     1921 cgggtcgatc gtttcgaccc gcttgcggct caccgccgac tgcttcagat cgaccagcac
     1981 cagcgagacg gcgcgatcgc cctggccg
//
LOCUS       DASWGA010000828         2019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_95385, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000828 DASWGA010000000
VERSION     DASWGA010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95385"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..1160)
                     /locus_tag="VF991_19400"
     CDS             complement(135..1160)
                     /locus_tag="VF991_19400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006937948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9558668.1"
                     /translation="MNSTKRVNLALQGGGSHGAFTWGVLDALIEDGRLEFEALSGTSA
                     GAINAAIMMQGWSQGGGPGARQALRAFWDELGTVAVASPIQRTPLDRLQGNWNLDDSP
                     AALWADLIQRTLSPWQRNPLKFDPLRELLRRHFDEKAVRACHEIKAFIAATNVETGKV
                     RIFTREELSVDALLASACLPNVHDAVVIDGVPYWDGGYRGNPPIWPFIYNSDSADVVL
                     VEVDPPSRQGIPKSNAEVADRLNEITFGGALMAEMRAIAFVQELIEKDAITGAFSGRL
                     KRILVHSIADPASLTPLGAVSKFNIEPEFLDHLFDLGRKAATLWLASTFDSLGAKSTI
                     DIRARFL"
     gene            1294..>2019
                     /locus_tag="VF991_19405"
     CDS             1294..>2019
                     /locus_tag="VF991_19405"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558669.1"
                     /translation="MLSFGQLISWGLVYYTFPLFVVPMTQELGWSRSAMFGALSAGLL
                     VAGLCSIPVGAWIDRGHGRMLMTGGSLLAAALLIVWSRVGSLPIFYALWIGLGACQAV
                     ILYETAFAVITRVYGPRYRQAILLMTFLGGLASTFGIPFAQLLIERIGWRPTLEVMAA
                     INLGVGVLIHWLFIPGPHEKPVPIAEVKPPAEGTKKQSPLAAAVRVPAFWGLVVAFAG
                     YGLAFSAMSFHLIPLLDDRHVPIA"
BASE COUNT          294 a          664 c          687 g          374 t
ORIGIN      
        1 gccgccgaga tcgatgccga tccgcatggg ctcactagta ccctgaatcg tttctgtcgt
       61 cctgagcgga gcgaaggacc tcatcgccgc gtgctgaggg catgagatcc ttcgcttcgc
      121 tcaggatgac aaactcacag aaaacgtgcg cggatgtcga tggtgctctt ggcgccgagc
      181 gagtcgaacg tcgacgccag ccacagggtt gccgccttgc gcccgagatc gaacaagtgg
      241 tccaaaaatt ccggctcgat gttgaacttg ctgacggcgc ccagcggcgt cagcgatgcg
      301 gggtcggcga tcgaatggac gaggatgcgc ttcaaccgcc cgctgaacgc gccggtgatg
      361 gcgtccttct cgatcagctc ctgcacgaag gcgatggcgc gcatctcggc catcagcgcg
      421 ccgccgaagg tgatctcgtt cagccggtcg gcgacctcgg cgttggattt cggaatgcct
      481 tggcgcgacg gcggatcgac ctcgaccagg accacgtcgg cgctgtcgct gttgtagatg
      541 aacggccaga tcggcgggtt gccgcgatag ccgccgtccc agtagggcac gccgtcgatc
      601 accacggcgt cgtgcacgtt gggcaggcag gccgaggcga gcagggcgtc gactgacagt
      661 tcctcgcgcg taaaaatccg caccttgccg gtctcgacat tggtggcggc gatgaacgcc
      721 ttgatctcgt ggcaggcgcg caccgctttc tcgtcgaagt gccggcgcaa cagttcgcgc
      781 aaggggtcga acttcagcgg attgcgctgc cacggcgaga gcgtgcgctg gatcaggtcg
      841 gcccacaggg cggccggcga atcgtcgagg ttccagttgc cttgcaggcg gtcgagcggc
      901 gtgcgctgga tcgggctcgc caccgccacc gtgccgagct cgtcccagaa ggcgcgcaag
      961 gcctggcgcg cgcccggccc gccgccctgc gaccagccct gcatcatgat ggcggcgttg
     1021 atggcgccgg cgctggtgcc gctcagcgcc tcgaattcca gccttccgtc ctcgatcaag
     1081 gcgtcgagca cgccccacgt gaaggcgccg tgcgagccgc cgccctgcag ggcgagattg
     1141 acgcgcttgg tcgaattcat gcggctattc tccacggcgc gtcggcgcta cgttcatcgt
     1201 cgtgtaacag aaggacggcg aggggcggcg ttcattatgg cgaagggcgg ggcggaggga
     1261 gcgtggcgaa agcgcccgtc ggccattctt tggatgctct cgtttggcca gctgatctcg
     1321 tggggtctgg tctactacac ctttccgctg ttcgtcgtgc cgatgacgca ggagctcggt
     1381 tggtcgcgca gcgccatgtt cggcgcgctg tcggccggcc tgctggtcgc cgggctgtgc
     1441 tcgatcccgg tcggcgcctg gatcgatcgc gggcatggcc gcatgctgat gaccggcggc
     1501 tcgctgctgg ccgcggccct cctcattgtg tggtcgaggg tcggttcact gccgatattc
     1561 tacgcgctgt ggatcgggct cggcgcctgc caggccgtca tcctctacga gacggccttc
     1621 gccgtgatca cccgggtcta cgggccgcgc taccggcagg cgatcctgtt gatgaccttc
     1681 ctgggcggcc tggccagcac cttcggcatt ccgttcgccc agctcctgat cgagcgcatc
     1741 ggctggcgtc cgacgctgga agtgatggcg gcgatcaatc tcggcgtcgg cgtgctgatc
     1801 cactggctgt tcattcccgg cccgcacgag aagcccgtgc cgatcgccga ggtgaaaccg
     1861 cccgccgagg gcacgaagaa gcagagcccg ctcgccgcgg ccgtgcgggt gccggccttc
     1921 tggggcctgg tcgtggcctt cgccggctac ggtctcgcct tctccgccat gagctttcac
     1981 ctgatcccct tgctcgacga ccgccacgtg ccgatcgcc
//
LOCUS       DASWGA010000829         4925 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_860065, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000829 DASWGA010000000
VERSION     DASWGA010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4925
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860065"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VF991_19410"
     CDS             complement(<1..270)
                     /locus_tag="VF991_19410"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013417982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HEX9558670.1"
                     /translation="MTFVLLIAPLAVGVVRRVKARLMRRQGPPLLQAYLDLAKLLRKE
                     SVVAESASWLFRSAPYLIFALTWVAAALVPSFASGLMFNWAADVVA"
     gene            complement(312..2318)
                     /gene="hyfB"
                     /locus_tag="VF991_19415"
     CDS             complement(312..2318)
                     /gene="hyfB"
                     /locus_tag="VF991_19415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
                     /protein_id="HEX9558671.1"
                     /translation="MPELFVLGVALGALTVAAFLAALTRGPALALVYPVSALAAITLG
                     VVDLRVLLAGADVAARLPIGLPGIGLHLRLDSLSAFFGIVINGGVLAASVYGMGFDRA
                     KEMTPRVEPLFPLFAAAMNLVLIADDAYAFLFSWELMSLASWALVVARHTDPESRRAA
                     HLYLVMAAIGTAALLFAFGGLAGPAGGYAFDTVRADPPQPMVAALVLVAALVGCGSKG
                     GLIPLHAWLPLAHPAAPSHVSALMSGVMTKVAIYGFVRIAFDLLGPPVWWWALPPIIL
                     GAMTAVLGLLYAVLDRDLKRVLAYSTIENVGVIFVALGLALAFSANGQREGAAVAMAA
                     ALLHVLNHSWFKSLLFLGAGAVLHATGRRDLDGLGGLIHRMPRTAAFFLVGALAISAL
                     PPLNGFVSEWLLFQAVIAAPALPQAALHFASPAIGAMLALAAALAAACFVRVYGTAFL
                     GRPRSAEATGAHDVPLAQQLAMGGLALLCILGGLMGSVLAIALAPVLDQLVGGGLPGA
                     GSGPTLFSLVAFDPARSVYDAPIIALFVAIASLTTLIVVHRLSERRTRRGPAWDCGFR
                     DPSPATQYTASSFAQPLRRVYGAVAFTARETVEMPAPGDTRPARFSVVVVDHLWRAFY
                     AAPGRAVLGLSERLNVLQFLTIRRYLVLMFAALIILLSIAAVTT"
     gene            2488..3483
                     /locus_tag="VF991_19420"
     CDS             2488..3483
                     /locus_tag="VF991_19420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9558672.1"
                     /translation="MQRRMLVGGLAASAVAAPFVGAARAQAPITLNGAVQFNDDHAFN
                     KALLRFEELVKKYYGKPINFVLHRNSALGLEKQYFEYMAQGKAVDYGIVSPAHMSTFS
                     KAAPFIDAPFLFRDLAHWNKVLDADLLKPVADEIAQKADVMLIGYAGGGTRNIFVNKP
                     VSNLAEIKGLKVRVQGAPIWSKTFAAAGMSPTVIAYNEVYNAIQNNVIAAGENEAAGV
                     ETMKFYEVAPNLAMTEHAITIRPICFSGKTFKTLPKDLQEAILKAGKEAGAYGRQVES
                     SEDEQKLVAMEKAGKLKRIAFKDRAPMKKLVDPVMEAYAKEIGADAIFAQIVALN"
     gene            3553..4068
                     /locus_tag="VF991_19425"
     CDS             3553..4068
                     /locus_tag="VF991_19425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEX9558673.1"
                     /translation="MSLPVAPPHNLWRRFTATYARILTAALALSVAILVIPVTLQMIA
                     RYTDLIPAYIWTEEMARFLFIWMIMIGAMVGVRESAHFEVDVWPTLSRRAEAAVRILA
                     RLGILAMSLIFVVGGIEFTRFAWYRTSELADLPLWLIHIAWPAAGITWIVFLGEQFVD
                     ETRILLGRTNP"
     gene            4065..>4925
                     /locus_tag="VF991_19430"
     CDS             4065..>4925
                     /locus_tag="VF991_19430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX9558674.1"
                     /translation="MTASVFTSGEAAAILFGVFAFLLVLRVPVAFALGLACLPLFYVE
                     PRLSTMMLAQETFNAYNSFILLAVPFFLLTANLMSVGGITDRLVTLSRALVGSWPGSL
                     AQINVVLSVFFAGISGSSTADAASQSKIFIDAQTKEGYDLSFSIAITAVSAVLAVIIP
                     PSILMIVWGGLISTSIGALYLAGVIPGLLIAGAQMATVHVYAVRRGYPTYPRSTFRQL
                     LCATWVSLPALMTPFIIVGGILLGWFTATESACVAVLYSVLLSVIVYREMGPRQLYSA
                     LLDTGRLAAVA"
BASE COUNT          885 a         1659 c         1629 g          752 t
ORIGIN      
        1 cgcgaccacg tcggccgccc agttgaacat caggcccgag gcgaagctcg gcaccagggc
       61 ggccgccacc caggtgagcg cgaagatcag atagggcgcg ctgcgaaaca gccaggaggc
      121 gctttccgcg accaccgatt ccttgcgcag gagcttggcg aggtcgaggt aggcctgaag
      181 cagcggcggc ccctggcggc gcatcagccg cgccttgacc cgccgcacga cgccgacggc
      241 gagtggcgcg atcagcagca cgaaggtcat ctgggtgccc tgcgccagca gctgcaccaa
      301 aagatcgcgc gtcacgtcgt caccgccgcg atcgacagca ggatgatgag ggcggcgaac
      361 atcagcacca gatagcgccg gatggtgagg aactgcagca cgttcaggcg ctcggagagc
      421 ccgaggacgg cgcggccggg cgcggcgtaa aacgcccgcc acagatggtc gaccacgacg
      481 accgagaagc gcgcgggccg cgtatccccg ggcgccggca tctcgaccgt ctcgcgcgcg
      541 gtgaaggcca cggcgccata tacgcggcgc aatggctggg cgaagctcga ggcggtgtat
      601 tgcgtggccg gcgaagggtc gcgaaagccg cagtcccagg ccgggccgcg gcgggtccgg
      661 cgctcggaca ggcgatggac cacgatcagc gtcgtcagcg aggcgatggc gacgaacagc
      721 gcaatgatcg gcgcatcgta gacgctgcgc gccggatcga aggcgacgag cgagaacagc
      781 gtgggcccgc tgcccgcccc tggcaggccg ccgcccacga gctggtccag caccggcgcc
      841 agcgcgatcg ccagcacgct gcccatgagc ccgcccagga tgcagagcag cgcgagtccg
      901 cccatggcga gctgctgggc gagcggcacg tcgtgcgcgc cggtggcttc ggcgctgcgc
      961 ggccggccga ggaaggccgt gccgtagacc cgcacgaagc aggcggccgc gagcgccgcg
     1021 gccagcgcca gcatggcgcc gatcgcgggc gacgcgaaat gtagcgccgc ctgcggcagc
     1081 gccggcgcgg caatgaccgc ctggaacagc agccactcgg acacaaagcc gttgagcggc
     1141 ggcaaggccg agatggcgag cgcccccacc aggaagaagg cggcggtgcg cggcatgcga
     1201 tggatcagtc cacccagccc gtcgaggtcg cgccggccgg tggcatgcag gaccgcgccc
     1261 gccccgagga agagcagcga cttgaaccag gaatggttga ggacatgcag cagcgccgcg
     1321 gccatcgcca ccgccgcgcc ttcacgctgg ccgttggcgc tgaaagcgag ggcaaggccc
     1381 agggccacga agatcacgcc gacattctcg attgtcgaat aggcaaggac gcgcttgaga
     1441 tcgcggtcga gcacggcata gagcaggccc agcacggcgg tcatcgcgcc caggatgatg
     1501 ggcggcagcg cccaccacca gacgggcggt cccaagagat cgaaggcgat gcgcacgaag
     1561 ccgtagatcg ccaccttggt catgacgccg ctcatcaggg cggagacgtg gctcggcgct
     1621 gccggatggg cgagcggcag ccaggcatgc agcgggatca ggccgccctt cgagccgcag
     1681 ccgacaagag cagcgaccag gacgagggcg gccaccatcg gctgaggcgg atcggcgcgg
     1741 acggtgtcga aggcatagcc gccggccggt ccggcgagtc cgccgaaggc gaacagaagt
     1801 gccgccgtcc cgatcgccgc catgacgagg tagagatggg cggcccgccg gctttcgggg
     1861 tcggtatggc gggcgacgac cagcgcccac gatgccagcg acatcagttc ccaggagaac
     1921 aggaaggcat aggcatcgtc ggcgatcagc acgagattca tcgccgcggc gaacaggggg
     1981 aacaagggtt cgacccgcgg cgtcatctcc ttggcccgat cgaagcccat gccgtagaca
     2041 ctggccgcca gcacgccgcc gttgatcacg atgccgaaga acgccgacag gctatccagc
     2101 cgcaggtgca gaccgatgcc cggcaggccg atcggcaggc gggcagcgac gtcggccccc
     2161 gccagcagaa cgcgcaagtc gacgacgccg agcgtgatcg ccgccagggc gctcacggga
     2221 taaaccaatg ccagggccgg gccgcgcgtc agcgccgcga ggaaagcggc aacagtcaat
     2281 gcccccaaag cgacgcctaa cacaaacaat tccggcacga ctgcctcggt atctcgtcct
     2341 tggttccatt attactagat ttttgtgtct aatctagcgg ccttgggtgc ttcggccgtt
     2401 ttctggcctg acagtccgtt cccatgcata gttcatgcga aggtcgatca cagcagccga
     2461 aaaaaagcga cctcgggagg aaaatcgatg caacgcagaa tgctggtggg cggccttgcc
     2521 gcctcggccg tcgccgcgcc gttcgtcggc gccgcccgcg cccaagcgcc gatcacgctg
     2581 aacggtgccg tccaattcaa tgacgatcac gccttcaaca aggcgctgct caggttcgaa
     2641 gaactggtga agaaatacta cggcaagccg atcaacttcg tgctccatcg caattccgcg
     2701 ctcggcctgg agaagcagta tttcgagtac atggcgcagg gcaaggcggt cgattacggc
     2761 atcgtctcgc cggcgcacat gtcgaccttc tcgaaggcgg cgccgttcat cgacgcgccg
     2821 ttcctgttcc gcgacctggc gcactggaac aaggtgctcg acgccgacct cctgaagccg
     2881 gtggccgacg agatcgccca gaaggccgac gtcatgctga tcggctatgc cggcggcggc
     2941 actcgcaaca tcttcgtcaa caagccggta tcgaacctgg ccgagatcaa gggactcaag
     3001 gtccgcgtcc agggcgcacc gatctggtcc aagacctttg ccgcggccgg catgtcgccg
     3061 accgtcatcg cctacaacga ggtctacaac gccatccaga acaacgtcat cgccgccggc
     3121 gagaacgagg cggccggcgt ggagaccatg aagttctacg aagtggcgcc caatctcgcg
     3181 atgaccgagc acgccatcac catccggccg atctgcttct cgggcaagac cttcaagacg
     3241 ctgccgaagg acctgcagga agcgatcctc aaggcgggca aggaagccgg cgcctacggc
     3301 cggcaggtcg agagttcgga ggacgagcag aagctggtgg caatggaaaa ggccggcaag
     3361 ttgaaacgca tcgccttcaa ggatcgcgcg cccatgaaga agctggtcga tccagtgatg
     3421 gaagcctacg ccaaggagat cggcgccgac gcgatattcg cccagatcgt ggcgctgaac
     3481 tgacaagcgg ggcgcagcgg gcgcgctgcc cgctgcagtc gcgcccgtcg tcctctttct
     3541 tgcggttttc ccatgtccct accagtcgcc ccgccacata acctgtggcg ccggttcacg
     3601 gccacctatg cccggatcct gacggccgcg ctggccttgt cggtggcgat ccttgtcatc
     3661 cccgtcaccc tgcaaatgat cgcgcgctac accgacctga tcccggccta catctggacc
     3721 gaggagatgg cgcgcttcct gttcatctgg atgatcatga tcggcgccat ggtcggggtg
     3781 cgcgagagcg cgcacttcga ggtcgacgtc tggccgaccc tgtcgcggcg cgccgaggcg
     3841 gccgtccgca tcctggcgcg cctcggcata ctggcgatgt cattgatctt cgtggtgggc
     3901 ggcatcgagt tcacgcgctt cgcctggtac cgcacgtccg agctggccga tctgccgttg
     3961 tggctgatcc atatcgcctg gccggcggcc ggcatcacct ggatcgtctt cctcggcgag
     4021 cagttcgtcg acgaaaccag gattctgctc ggcaggacca acccatgacc gcgtccgtct
     4081 tcacctcggg agaggcggcg gcgatcctgt tcggtgtctt cgcctttctg ctggtgctgc
     4141 gcgtgccggt ggcctttgcg cttggcctgg cctgcctgcc gctcttctac gtcgagccca
     4201 ggctttcgac catgatgctc gcgcaggaga ccttcaacgc ctacaactcc ttcatcctgc
     4261 tggcggtgcc gttcttcctg ctgaccgcca acttgatgag cgtgggcggc atcaccgatc
     4321 ggctggtgac tctctcgcgg gcgctggtcg gaagctggcc aggctcgctc gcgcagatca
     4381 acgtcgtgct gtcggtgttc ttcgccggca tctccggctc gtcgaccgcc gacgcggcga
     4441 gccagagcaa gatcttcatc gatgcccaga ccaaggaggg ctacgacctt tccttctcga
     4501 tcgccatcac cgcggtatcc gccgtgctcg cggtcatcat cccaccctcg atcctgatga
     4561 tcgtgtgggg cggcctgatc tcgacctcga tcggcgccct ctaccttgcc ggcgtcattc
     4621 ccggtctgct gatcgccggc gcgcagatgg cgacggtgca tgtctacgcc gtgcggcgcg
     4681 gctacccgac ctatccgcgc tcgaccttcc gccagctcct gtgcgccacc tgggtgtcgc
     4741 tgccggcact gatgacgcct ttcatcatcg tcggtggcat cctgctcggc tggttcaccg
     4801 ccaccgaatc ggcctgcgtc gccgtgcttt attcggtgct gctgtcggtc atcgtctatc
     4861 gcgagatggg accgcgccag ctctactcgg cactgctcga caccggccgg ttggccgcgg
     4921 tggcg
//
LOCUS       DASWGA010000830         2245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2122620, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000830 DASWGA010000000
VERSION     DASWGA010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2122620"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..392
                     /locus_tag="VF991_19435"
     CDS             <1..392
                     /locus_tag="VF991_19435"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9558675.1"
                     /translation="APPFLGPYVASKHAVVGLSESLAAELALIRSAIRVSVVCPGHVQ
                     SRIAESERNRPAAFAAASKTPADMLARIRAGFEQALGEPMPAPALAERVLAGIEADDF
                     LILTHADLNGQVRARLASIERAARKAA"
     gene            complement(389..1249)
                     /locus_tag="VF991_19440"
     CDS             complement(389..1249)
                     /locus_tag="VF991_19440"
                     /inference="COORDINATES: protein motif:HMM:NF024844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9558676.1"
                     /translation="MTIDIAPLRKEIGRKIADEDVVTEAPIKAMIATFDRPDKVPAPG
                     EPIAPGWHLCFLHSYARRASLGADGAAVEGGVLPKIPMPRRMYAGSTFTFDGDIRMGD
                     KLRRELEFTDIQLRQGSTGTLLVTTQTRRIFTPRGLALTEAASTVFREEVKAGDKSGV
                     PVRDAAPADVPWRRTIKPDPVMLFRYLAITFNPHRIHYDRTYCIETEGYPGLVVHGPF
                     AQQCLFDLLRDSMAGRRIKTFAVRARAPLFDTAPFDVIGRPTADGQGAELWTVTPKGT
                     IAAQATATLA"
     gene            complement(1294..1638)
                     /locus_tag="VF991_19445"
     CDS             complement(1294..1638)
                     /locus_tag="VF991_19445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEX9558677.1"
                     /translation="MTPASFRRIALSLEGATEGAHGGHADFRAGGKVFASLGYPGKEW
                     GMVKLAPDQQKMLVAAEPGIFVAVKGTWGQRGATSVRLAAADARTMLSALTMALRNVT
                     APKPKKARRAAA"
     gene            complement(1635..>2245)
                     /locus_tag="VF991_19450"
     CDS             complement(1635..>2245)
                     /locus_tag="VF991_19450"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9558678.1"
                     /translation="PTDDRQRLYNLGNRLWHTDSSFKRLPAYCSMLHARSIPPIGGQT
                     EFADMRAAYDALPEATQRRIAGLVAEHSIMTSRAKLGFSDFDESEREAFKPVPQVLVR
                     RLQDSGRMSLYVASHAGAIRGMPDGEARKLLEELTEHATQRQFVYSHRWRVKDLVIWD
                     DRCTMHRGLAFDDQRYQRDMRRATVSDVAPTCEQMGLAIAAE"
BASE COUNT          337 a          761 c          768 g          379 t
ORIGIN      
        1 ccgcaccacc cttcctcggc ccctatgtag cgtccaagca cgccgtcgtc gggctgtccg
       61 agagtctggc cgccgagcta gcgttgatca ggtccgccat tcgcgtctcg gtcgtctgcc
      121 ccggccacgt gcaatcccgc atcgccgaat cggagcgcaa ccggccggcg gcatttgccg
      181 ccgcgtcgaa gacccccgcg gacatgctgg cgcgcatccg cgccggcttc gagcaggcgc
      241 tgggagagcc gatgccagcc cccgctcttg ccgagcgggt tctcgccggc atcgaggccg
      301 acgacttcct gatcctcacc cacgccgatc tcaacggtca ggtgcgcgct cgactggcat
      361 cgattgaacg ggcggcgcgc aaggccgcct aggccagcgt cgccgtcgcc tgcgccgcga
      421 tcgtgccctt gggtgtcacc gtccatagtt cggcgccctg gccgtcggcg gtcggccggc
      481 cgatgacgtc gaacggcgcg gtatcgaaca gcggcgcgcg ggcgcgcacg gcgaaggtct
      541 tgatccggcg gcccgccatc gaatcgcgta aaaggtcgaa caggcattgc tgggcgaacg
      601 ggccgtgcac caccaggccg ggataaccct cggtctcgat gcagtaggtg cggtcgtagt
      661 ggatgcggtg cgggttgaaa gtgatcgcca aatagcggaa cagcatcacc ggatcaggct
      721 tgatggtgcg ccgccatgga acgtcagcgg gcgcggcatc gcgtacgggc acgccgctct
      781 tgtcgcccgc cttcacttcc tcacggaaca ccgtgctggc ggcctcggtg agtgcgaggc
      841 cgcgcggcgt gaaaatgcgg cgggtctggg tcgtgacgag cagcgtgccg gtgctgccct
      901 gacggagctg gatgtcggtg aattcgagct cacgcctgag cttgtcgccc atccggatgt
      961 cgccgtcgaa ggtgaaggtc gaaccggcat acattcgtcg cggcatcggg atcttgggca
     1021 gcacgccgcc ttcgacggca gcgccgtccg cccccagcga ggcgcggcgg gcataggaat
     1081 gcaggaagca gagatgccag cccggcgcga tcggctcgcc cggcgccggc actttgtcgg
     1141 gccggtcgaa ggtggcgatc atggccttga tgggcgcttc ggtgacgacg tcctcgtccg
     1201 cgatcttgcg cccgatctct ttcctgagcg gcgcgatgtc gatggtcatg gctcttcctc
     1261 ccggtcttgg ccatccgccg tggcggccga cgatcatgca gcggcgcgcc tagccttttt
     1321 cggcttcggc gcggtcacat tccgcaacgc catggtaagc gcgctcagca ttgtccgcgc
     1381 atcggcggcg gccagccgca cgctggtggc gccgcgctgg ccccaagtgc ccttgacggc
     1441 cacgaatatc ccgggctccg ccgcaaccag cattttctgc tggtccggag cgagctttac
     1501 catgccccat tccttgccgg gatagccgag cgaggcgaag acttttccgc cggcgcgaaa
     1561 gtcggcgtgc ccgccatgcg ccccttccgt cgcgccctcc agcgagagcg caatcctgcg
     1621 gaacgaggcc ggcgtcattc ggcagcgatg gccagtccca tctgctcgca ggtcggcgcc
     1681 acgtcggaga ccgtggcgcg gcgcatgtcg cgctgatagc gctggtcgtc gaacgccagg
     1741 ccgcgatgca tggtgcagcg gtcgtcccag atcacgaggt ccttgacccg ccagcgatgg
     1801 ctgtagacga actggcgttg cgtggcgtgc tcggtcagct cttccaggag cttcctggcc
     1861 tcgccgtcag gcatgccgcg gatcgcaccg gcgtggctgg cgacataaag gctcatgcgg
     1921 cctgagtcct ggagccggcg caccagcacc tgcggcaccg gcttgaacgc ctcgcgctcg
     1981 ctctcgtcga aatcgctgaa acccaacttg gcgcgcgacg tcatgatcga atgctcggcc
     2041 acaaggcccg cgatgcggcg ttgcgtggcc tcgggcagcg catcgtaggc cgcacgcatg
     2101 tcggcgaact cggtctggcc gccgatcggc gggatcgagc gggcatgcag catggagcaa
     2161 taggccggca ggcgcttgaa cgaggaatcg gtgtgccaca gccggttgcc gagattgtag
     2221 agccgctggc ggtcgtcggt cggca
//
LOCUS       DASWGA010000831         1855 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1354096, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000831 DASWGA010000000
VERSION     DASWGA010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1354096"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..>1855)
                     /gene="sdhA"
                     /locus_tag="VF991_19455"
     CDS             complement(148..>1855)
                     /gene="sdhA"
                     /locus_tag="VF991_19455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEX9558679.1"
                     /translation="TFGMAAKGLKTACITKVFPTRSHTVSAQGGISAALGNMGPDDWR
                     WHMYDTIKGSDWLGDQDAIEYMCRDGIPAVIELEHFGVPFSRTPEGKIYQRPFGGMTT
                     EYGKGIAHRTCAAADRTGHAMLHTLYQQSLRNHAEFFIEYFALDLIMDEGVCRGVMAW
                     NLDDGTIHRFRAHKTVLATGGYGRAYFTCTSAHTCTGDGGAMALRAGLPTQDMEFIQF
                     HPTGIYGAGCLITEGVRGEGGYVTNGTGERFMERYAPSAKDLASRDVVSRSMTIEIRE
                     GRGCGPNKDYIELHVEHLDPKVIHERLPGIAETARIFAGVDVTRQPIPILPTCHYNMG
                     GIPTNYHCEVMTVKDGDPNTVVPGLMALGEAASVSVHGANRLGSNSLLELVVFGRSAA
                     NRAAELLTPGEPHKQLPHAGEEAIARLDRLRHASGGTPTAQLRLNMQRTMQNDCAVFR
                     TQQSLDEGCKNLEKVFDGRSDIRVKDRSLIWNSDLMETLEFENLILLAQATIRSAANR
                     KESRGAHAREDYPERDDKEWLKHTVIWVADSGKTRIDYRPVKLQPMSNDVQSFPPKAR
                     VY"
BASE COUNT          281 a          584 c          636 g          354 t
ORIGIN      
        1 gtctagcgag ggattcttgc cgtcgtccgg cgtccagcga tagaccttga accgcctgag
       61 gttcttggta gccggcgccg cggcataggt ctggccgact ccgatcttgg aattggcggg
      121 cagtgcaaac tcagccattg cttcctctta gtagacgcgc gccttgggcg gaaacgactg
      181 cacgtcgttg ctcatcggct gcagcttcac gggccggtag tcgatgcggg tcttgccgct
      241 gtcggccacc cagatcaccg tgtgcttcag ccattccttg tcgtcgcgct cgggatagtc
      301 ctcgcgggcg tgcgcgccgc ggctctcctt gcggttggcc gccgagcgaa tggtcgcttg
      361 cgccagtaga ataagattct cgaactccag ggtctccatg aggtcggagt tccaaatcag
      421 cgaacggtcc ttgaccctga tgtccgaacg gccgtcaaac accttctcga gattcttgca
      481 accctcgtcc aggctctgct gggtgcggaa caccgcacag tcgttctgca tggtgcgctg
      541 catgttgagg cgtagttgtg ccgtgggcgt gccgccggaa gcgtggcgca gccggtccag
      601 gcgcgcgatc gcctcttcgc cggcatgcgg gagctgcttg tgcggctcgc ccggtgtgag
      661 cagctcggcg gcgcgattgg cggcggagcg gccgaacacc acgagctcga gcagcgagtt
      721 ggacccgagt cgattggcgc catgcacgct gaccgaggcc gcctcgccga gcgccatcaa
      781 gcccggcacc acggtgttgg gatcgccgtc cttcaccgtc atgacttcgc agtgatagtt
      841 cgtcgggatg ccgcccatgt tgtagtggca ggtcggcagg atggggatcg gctgccgcgt
      901 gacgtcgacg ccggcgaaga tgcgcgccgt ctcggcgatg ccgggcagcc gctcgtgaat
      961 caccttgggg tcgagatgct cgacgtgcag ctcgatgtaa tccttgttgg gaccgcagcc
     1021 gcgcccctcg cggatctcga tggtcatcga gcggctgacg acgtcgcgcg aggcgaggtc
     1081 cttggccgac ggcgcataac gctccatgaa gcgctcgccg gtgccgttgg tgacgtagcc
     1141 gccttcgccg cgcacgccct cggtgatcag gcagcccgcg ccgtagatgc cggtcggatg
     1201 gaactggatg aactccatgt cctgggtcgg caggccggca cgcagcgcca tggcgccgcc
     1261 atcgccggtg caggtgtgcg ccgaggtgca ggtgaaatag gcgcggccgt agccgccggt
     1321 cgccagcacc gtcttgtggg cacggaaacg atggatggtg ccgtcgtcga ggttccacgc
     1381 catgacgccg cggcacacgc cctcgtccat gatcaggtcc agggcgaaat actcgatgaa
     1441 gaactcggcg tggttcctga gcgactgctg atagagcgtg tgcagcatgg cgtggccggt
     1501 gcggtcggcc gccgcgcagg tgcgatgcgc gatgcccttg ccgtactccg tcgtcatgcc
     1561 gccgaagggg cgctggtaga tcttgccttc gggcgtgcgg ctgaacggca cgccgaaatg
     1621 ctcgagctcg atgaccgcgg gaatgccgtc gcggcacatg tattcaatgg cgtcctggtc
     1681 gcccagccag tccgagccct tgatggtgtc gtacatatgc cagcgccagt cgtccggccc
     1741 catgttgccg agtgcagccg agataccgcc ctgcgccgat acggtgtggc tgcgggtcgg
     1801 gaacaccttg gtgatgcagg ccgtcttcag tcccttggcc gccatgccga aggtg
//
LOCUS       DASWGA010000832         2163 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_860664, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000832 DASWGA010000000
VERSION     DASWGA010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860664"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VF991_19460"
     CDS             <1..212
                     /locus_tag="VF991_19460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558680.1"
                     /translation="TWVTVASELSATVVLYSGPWRTMTVVMFQALEGSGAGIATAAAS
                     TLIVVTLLPIVLLYRLVRRYELSMS"
     gene            315..1214
                     /locus_tag="VF991_19465"
     CDS             315..1214
                     /locus_tag="VF991_19465"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558681.1"
                     /translation="MADDWPSRQIKVVIPYPPGGPTDISTRIVMEKVGQVLGQPILFD
                     NKGGASGMIGAEYAKTQPADGYTFLATTVAMLTITRHLQPIPFDPEKDFLTVARMSTS
                     WAALAIHPSVPANDMAEFIAYVKANPGKVNYGSAGLATITHLYGEILNLEAGIKLVHV
                     PYKGSAQATQDLLGGQIQAQFDQTVLPHVLAGRLKGLAIISDSRWPHKPEIPTLREAG
                     YGKEGGESWFGILAPAGTPQPIVDKMARAIEEALKSSDVLDKLDKGGAKATYLGPADM
                     RAQVTKEGAMFGDIIRRGNVKTQ"
     gene            1305..2009
                     /locus_tag="VF991_19470"
     CDS             1305..2009
                     /locus_tag="VF991_19470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEX9558682.1"
                     /translation="MCNLCLNVGLSRRLFVHAGAAALATAPLIGTVHAQPARTADTPD
                     AALNLLLEGNARYAANQMRERDFSANRAARAQGQAPFAAILGCADSRVAPELAFDQPP
                     GELFVVRVAGNFVTPDGLGSLEYGVAVLGTKVIMVLGHTSCGAVNATTAALQKGNTLP
                     GHIADLVRAMKPAIEPALKETGGDLAQRAVIANVRYNVQRLKEATPILADMVASGKLR
                     VVGGVYDLATGKIAVV"
BASE COUNT          397 a          731 c          698 g          337 t
ORIGIN      
        1 tgacctgggt caccgtggcc tcggagctca gcgccaccgt ggtgctctac agcgggccct
       61 ggcggaccat gaccgtcgtg atgttccagg cgctcgaagg cagcggcgcg ggcatcgcca
      121 ccgcggcggc gtcgacccta atcgtcgtca ccctgctgcc gatcgtgttg ctctatcgcc
      181 tggtccgtcg ctacgaattg tcgatgtcat agtcatcgag aaaaccaggt ctccggaagg
      241 actccatgcg tcgtcgcgtt ttcaccgcct ctgccttggc ggcactttct gcgcccgctt
      301 tgcccacgac tgtcttggcg gatgattggc cgagccgcca gatcaaggtg gtgatcccct
      361 atccgccggg cggtccgacc gacatctcga cgcgcatcgt catggaaaag gtgggtcagg
      421 tcctgggcca acccatcctg ttcgacaaca agggcggcgc ttcgggcatg atcggcgcgg
      481 aatacgccaa gacccagccg gccgacggtt acaccttcct cgccaccacg gtggcgatgc
      541 tcaccatcac ccgtcacctc cagcccattc ccttcgatcc ggagaaggac ttcctcaccg
      601 tggcgcgcat gtcgacctcg tgggcggccc tggccatcca tccctcggtg ccggccaacg
      661 acatggcgga gttcatcgcc tacgtgaaag ccaaccccgg caaggtgaac tatggctcag
      721 cgggtctcgc cacgatcacc catctctatg gcgagatcct gaacctcgag gccggcatca
      781 agctggtgca cgtgccctac aagggcagcg cgcaggcgac gcaggacctg ctgggcggcc
      841 agatccaggc gcagttcgac cagaccgtgc tgccgcacgt cctggccggc cgcctgaagg
      901 gactggcgat catttcggac tcgcgctggc cgcacaagcc ggagatcccg acgctcaggg
      961 aggcgggcta cggcaaggaa ggcggcgaga gctggttcgg catcctggcg cccgccggca
     1021 cgccgcagcc catcgtcgac aagatggccc gggcgatcga ggaagcgctg aaatcgtccg
     1081 atgtgctcga caagctcgac aagggcggcg ccaaggcgac ctatctcggc cccgccgaca
     1141 tgcgcgccca agtcaccaag gaaggcgcga tgttcggcga catcatccgg cgcggcaacg
     1201 tcaagacaca atgagtgcaa ggctcgagca tcgctcgcgc ggcttgcacg aaggcgaaat
     1261 aattgagaag attcaaccga cacatacgag ggggagataa ggtcatgtgc aacctttgtc
     1321 ttaatgttgg actatctcgt cgcctgttcg tccacgccgg cgccgcggcg ctggcaaccg
     1381 caccgctgat cggcaccgta cacgcccagc ccgcgcgcac cgccgacacg cccgacgcgg
     1441 cgctcaacct tttgctcgaa ggaaatgcac gctacgcggc aaaccagatg cgcgaacgcg
     1501 acttttccgc caaccgggcc gcccgggcgc agggccaggc gccgttcgcc gcgattttgg
     1561 gttgcgccga ttcgcgagtc gcgccggagc tggccttcga tcaaccgccg ggcgagctgt
     1621 tcgtggttcg cgtcgccggc aacttcgtca cgcccgatgg gctgggcagc ctggagtatg
     1681 gcgtagccgt gctcggcacg aaggtgatca tggtgctggg tcacaccagt tgcggcgccg
     1741 tcaacgccac gacggcggcg cttcagaagg gcaacaccct gccaggtcac atcgccgacc
     1801 tggtgcgggc gatgaagccg gccatcgagc cggccttgaa ggagaccggc ggcgacctgg
     1861 cgcagcgcgc ggtcatcgcc aacgtgcgct acaacgtgca gcgcctgaag gaagccacgc
     1921 ccatcctggc cgacatggtc gccagcggta agcttcgcgt ggtcggcggc gtttatgatc
     1981 tggcgacagg caagatcgcc gtcgtgtagg caccggtcag cggcggaacc aggcgcgcgg
     2041 ccatagacag gagagagcca gcgccatcag cagaccgccg cccgccgcca ggaaggcgaa
     2101 gcgatagccg gccaggaagc cgtcggcggc gccgtgggcg taaagcgcgg tcagcaccga
     2161 agc
//
LOCUS       DASWGA010000833         3348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1490964, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000833 DASWGA010000000
VERSION     DASWGA010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3348
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490964"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VF991_19475"
     CDS             <1..429
                     /locus_tag="VF991_19475"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9558683.1"
                     /translation="PSLARTRTVMRWHLSYRPRHYVLWAIEERTAKKGDGRGAIGMIN
                     YHRRDLREKRVDVGWLMLPQHQGKGYAAEAGRALLRYLVDELGIHKVEALIAPENKPS
                     AALAKRLGFRLEGGPIRDRWFVSGRWLSVMLYGLLAGEER"
     gene            429..1598
                     /locus_tag="VF991_19480"
     CDS             429..1598
                     /locus_tag="VF991_19480"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9558684.1"
                     /translation="MRPVFDPSTVHHLKHKGAVDADGHVLEDAGLWDRYIEAKYRDRA
                     LRMKRDADGLEYLEIGGMPSKRTRKGYPATLGRMGQKDLDAFKPHPDKTYAANMPYGA
                     CNAEERLKLLDAEGLDAAVLYPTLGILWEAELTDTELSQAYCRAYNRWIGDFCRESKG
                     RLIPIAHLSLGDPAAAAIELERAVKDGCHGAFVVPFASTHKAHGDPAHDAIFAKAVEL
                     DVPIAIHPAFEPFELRSPRFENGHRLSLLAAATAGDGVRQAFTTFFDFATFDRFPKLK
                     LVLLESGAGWIGYWLDRLDGVSTATFLGGRAPLKMKPSDYFRRQVWISGDPDERTLPA
                     MMKTYGADRFFWASDYPHPDHTGDYLQALEEMVDAVPSPARAGLLGGNVRQAFGF"
     gene            1807..>3348
                     /locus_tag="VF991_19485"
     CDS             1807..>3348
                     /locus_tag="VF991_19485"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9558685.1"
                     /translation="MDIDAWLGGLGMERYARTFRENDINAKALTELTDDDLRELGVSL
                     GHRRVLLKAIRELAAATAASDAPEHPLVEEPAQAPLPAAHAAASGSERRRLTVLICDL
                     VGSTALAARLDPEEMGGILRRWQDTISEPTTRFGGYVARFMGDGMLAYFGWPQAHEDD
                     AERAVRAGLAIAAATASLPVPGGEPLAVRVGIATGLVVVGELIGMGAAKEQVVVGETP
                     NLAARLQAEAAPGQVVIAEATRRLVAGGFDVTSLGARALKGLAERVEAHIVLGERRTT
                     NRFEARAEGALHPLYGRDHELAQLMGRWRQAQAGEGQGVLLVGEAGIGKSRIVRALLD
                     ALKHEPHTRLQYQCSPYHADSAFWPVTQQLALAAGFEPGDAPERRLDRLEALLAQAGT
                     AAAADAPLVAPLMGLDGAARYGPLTLAPAALRTHTLQALTRQVLGLAARRPVVVVVED
                     AHWIDPTTLELVERVIDAVAEAPVLVVLTSRSDNQPSLASHPHVTQLALYRLAREGAE
                     AIVRRL"
BASE COUNT          530 a         1135 c         1160 g          523 t
ORIGIN      
        1 cccagcctcg cccgcacgcg cacggtgatg cgttggcatc tctcctatcg gccacgacat
       61 tacgtgctgt gggcgatcga ggaacgcacc gccaagaaag gcgacggtcg cggcgccatc
      121 ggcatgatca actaccatcg ccgcgacctg cgggaaaaac gagtcgatgt cggctggctg
      181 atgctgccgc agcaccaggg caagggctac gcggccgagg ccggccgcgc gctcctgcgc
      241 tatctggtcg acgagctcgg catacacaag gtcgaggcgc tgatcgcgcc ggaaaacaag
      301 ccgtcggcgg cactcgccaa gcgcctgggc tttcgtctgg agggcgggcc gatccgcgac
      361 cgctggttcg tctcgggccg ctggcttagc gtcatgctct acggcctgct cgccggggag
      421 gaacggtaat gcgaccggta ttcgatccca gcacggttca ccacctgaag cataagggcg
      481 ccgtcgatgc cgacggccat gtgctggaag atgcgggcct gtgggaccgc tacatcgaag
      541 ccaaatatcg tgaccgcgcg ctgcgcatga agcgcgacgc cgacggcctg gaatatctcg
      601 agatcggcgg gatgcccagc aagcgcacgc gcaagggcta tccggccacg ctcggccgca
      661 tgggccagaa ggacctcgac gccttcaagc cgcatcccga caagacctac gccgccaaca
      721 tgccgtatgg cgcctgcaat gccgaggaac gtctgaaact gctggacgcc gaggggctcg
      781 atgcggcggt gctctatccc acgctcggca tcctgtggga ggccgagctg accgatacag
      841 agctgagcca ggcctactgc cgcgcctaca accgctggat cggcgatttc tgtcgggagt
      901 cgaaaggccg cctcattcca atcgctcacc tttccctcgg cgatccggcg gcggccgcca
      961 tcgaactgga gcgcgcggtg aaggacggct gccacggcgc cttcgtcgtg cccttcgcct
     1021 cgacgcacaa ggcgcacggc gatccggcgc acgatgcgat cttcgccaag gccgtcgagc
     1081 tcgacgtgcc gatcgccatc catccggcct tcgagccctt cgagctgcgc tcgccgcgct
     1141 tcgagaacgg ccatcgcctt tcgctgctgg cggcggcgac ggcaggcgac ggcgtgcgcc
     1201 aggccttcac caccttcttc gacttcgcga ccttcgatcg cttccccaag ctgaagctcg
     1261 tgctgctgga atcgggcgcc ggctggatcg gctactggct cgaccggctg gacggcgtgt
     1321 cgaccgccac cttcctgggc ggccgcgcgc ccttgaagat gaaaccgagc gactattttc
     1381 gccgccaggt ctggatctcg ggcgatcccg acgagcggac gctgcccgcc atgatgaaga
     1441 cctacggcgc cgaccgcttc ttctgggcgt cggactatcc ccaccccgac cacaccggcg
     1501 attacctgca ggcgctggag gagatggtgg acgcggtccc ctcgccggcc cgcgccggcc
     1561 ttttaggcgg caatgtgcgc caggctttcg gcttctgaga gggtcgctgc ccgggcctgg
     1621 atccgcgata cgctctcccc aggacattgc tcgaagagct gtagtgaaca gttgacgaaa
     1681 aaatgagcaa cgcgccgcgc gcggccggca acgtcgtgct cgtcgctcga cccgggacat
     1741 gcttcctttt tccacttatg ctccgaatag tcgcacggtc cgacaggtcg ggaaggaagt
     1801 agcggcgtgg atatagatgc atggctaggc ggcttaggca tggagcgtta cgctcggacg
     1861 ttccgagaga acgacatcaa tgccaaggcg ctgacggagc tgaccgacga cgacctgcgt
     1921 gagctcggcg tgtcgctcgg ccaccgccgc gtgctgctga aagcaatccg cgagcttgcc
     1981 gcggcgacgg ctgcctccga tgcgccagag catccactcg tcgaagagcc cgcccaagcg
     2041 ccgttgcccg ccgcgcacgc cgccgcaagt ggctccgagc ggcggcgtct gacggtgctg
     2101 atatgtgatc tcgtcggctc gacggcgctg gcggcgcggc tcgacccgga agagatgggc
     2161 gggatactgc gcaggtggca ggacacgatc tcggagccca ccacgcgctt cggcggctat
     2221 gtcgcgaggt tcatgggcga tggcatgctg gcctatttcg gctggccgca ggcgcatgag
     2281 gacgacgccg agcgggcggt gcgtgccggc ctcgccattg cagcggcgac cgcttccttg
     2341 cccgtgcccg gcggcgagcc gctggccgtg cgggtgggca tcgcgaccgg tctcgtcgtg
     2401 gtgggcgagc tgatcggtat gggtgcggcg aaagagcagg tggtggtcgg cgagacgccc
     2461 aacctcgccg cgcgcctaca ggcagaggca gcacccgggc aggtggtgat cgccgaggcg
     2521 acgcggcggc tggtggctgg cggcttcgac gtcacgtcgc tgggcgcgcg cgcgctgaag
     2581 ggcctggccg agcgagtcga ggcccatatc gtgctcggcg agcggcgcac gaccaaccgc
     2641 ttcgaggccc gcgccgaggg cgcactgcac ccgctgtacg gccgcgacca tgaactggcg
     2701 cagctcatgg ggcgctggcg gcaggcccag gccggggaag gtcagggcgt gctgctggtc
     2761 ggcgaggcgg gcatcggcaa gtcgcgcatc gtgcgcgcat tgctcgacgc gctgaaacac
     2821 gagccccaca cccgcctgca gtaccagtgc tcgccctacc atgctgacag cgccttctgg
     2881 ccggtaactc agcagctcgc cttggccgcg ggcttcgagc ccggtgacgc gcccgagcga
     2941 cggctcgaca gactcgaagc cttgctggcg caggcgggga cggcggcggc ggccgacgcg
     3001 ccgctggttg caccattgat gggactcgac ggtgccgcgc gctatggccc gctgaccctg
     3061 gcgcccgcgg cgctgcggac gcacacacta caggcgttga cgcggcaggt gctgggcctt
     3121 gccgcgcggc gtccggtggt ggtggtggtg gaggatgcgc actggatcga cccgaccacg
     3181 ctggagttgg tcgagcgggt gatcgacgcc gtggctgagg cgccggtgct ggtcgtgctg
     3241 acctcgcggt ccgacaacca gcccagcctc gccagccatc cccatgtcac ccagttggcg
     3301 ctctaccggc tcgcccgcga gggcgcggag gcaatcgtcc gccgcctc
//
LOCUS       DASWGA010000834         1724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_986737, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000834 DASWGA010000000
VERSION     DASWGA010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986737"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..754
                     /locus_tag="VF991_19490"
     CDS             200..754
                     /locus_tag="VF991_19490"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEX9558686.1"
                     /translation="MAADDAQPQQRVCEQPGCRLCGEYRAPRARDRLTDYRWFCLEHV
                     REYNKKWDYFAGLGADQIEAHIRADTTWRRPVWPLGARRNGGPYIHIVDPFDLADDAG
                     LGERYQPRHDGSEQLTPAERNALDVLELSWPSTRADVKSRYKELVKLHHPDANGGARE
                     AEEKLKQINAAYSTLRASEHLPAA"
     gene            865..>1724
                     /locus_tag="VF991_19495"
     CDS             865..>1724
                     /locus_tag="VF991_19495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9558687.1"
                     /translation="MASTTTAARQNASGMPDIKVSARQLFGIDTDMEVPAFSQASEHV
                     PEVDDAYLFDSDTTMAILAGFAHNRRVMVQGYHGTGKSTHIEQVAARLNWPCLRINLD
                     SHISRIDLIGKDAIVLRDGKQITEFREGILPWALQNPTALVFDEYDAGRADVMFVIQR
                     VLEVDGKLTLLDQNKVIRPHPAFRLFSTANTVGLGDTTGLYHGTQQINQGQMDRWSIV
                     TTLNYLPHDQEVNIVIAKTPTYDTDDGRKIVSAMVALADLTRAGFIAGDISTVMSPRT
                     VITWAENAKI"
BASE COUNT          331 a          584 c          513 g          296 t
ORIGIN      
        1 gtctcgccgc cctcgcgcca gccggcatgg ccatgatgac gcgacgattc gtcctcgacg
       61 gcaagacgcg ccggggcgaa gcggttcctg agcttgttgt caattgctat cgcgaccttg
      121 cccatcgctc gcctctcttg cctcgctgca gtgttgaaca catattatcc gaatgtctcg
      181 acggcgagcg aaacccttga tggcagccga cgacgcccag ccgcagcagc gggtgtgtga
      241 gcagccgggc tgccggctgt gcggcgagta tcgtgcgccg cgggcgcgcg atcgcctcac
      301 cgactatcgc tggttctgcc tggaacacgt ccgcgaatac aacaagaagt gggactattt
      361 cgccggcctc ggcgccgacc agatcgaagc ccatatccgc gccgacacga catggcgccg
      421 cccggtgtgg ccgttgggcg cgcgccgcaa tggtggtccc tacatccaca tcgtcgatcc
      481 cttcgacctc gccgacgacg caggcctcgg cgaacgctat caaccgcgcc acgatggcag
      541 cgagcaactg acaccggcgg agcgcaacgc cctggacgtg cttgaacttt catggccctc
      601 gacccgggcc gacgtgaaat ctcgttacaa ggaactggtc aaattgcatc atcccgatgc
      661 caatggcggg gcgcgggagg ccgaagaaaa actcaagcaa atcaacgccg cctattccac
      721 cctgcgggcc tctgagcatc tcccggctgc gtgattagcc cggctcgggg cagccccgcc
      781 aattggtcgc ttgcagtgca caattcggcc tgcgagtata atttaaaccc gcaatttggc
      841 gggctttgtt ttgtaggaca tgtgatggcc tctacgacga ccgcggctcg gcagaacgcg
      901 tcgggcatgc cggatatcaa ggtttccgcc cgtcagctgt tcggcatcga caccgacatg
      961 gaagttcctg ccttcagcca ggccagcgaa cacgtgccgg aggtcgacga cgcctacctt
     1021 ttcgattccg acaccacgat ggccatcctg gcgggcttcg cccacaaccg gagggtcatg
     1081 gtccagggct atcacggcac cggcaagtcg acccatatcg agcaggtcgc cgcccggctc
     1141 aactggccct gcctgcgcat caacctcgac agccatatca gccgtatcga cctgatcggc
     1201 aaggacgcga tcgtgctgcg cgacggcaag cagattaccg agttccgcga gggcatcctg
     1261 ccatgggcgc tgcagaaccc gacggcgctg gtgttcgacg aatacgacgc cggccgcgcc
     1321 gacgtcatgt tcgtgatcca gcgcgtgctc gaggtcgacg gcaagctcac cctgctcgac
     1381 cagaacaagg tgatccggcc ccatccggcg tttcgcctgt tctcgaccgc caacacggtg
     1441 ggtctcggcg acacgaccgg cctctatcac ggcacgcagc agatcaacca gggccagatg
     1501 gaccgctggt cgatcgtgac cacgctgaac tacctgccgc acgaccagga agtgaacatc
     1561 gtgatcgcca agacgccgac ctacgacacc gacgacggcc gcaagatcgt atcggccatg
     1621 gtggcgctgg ccgatctcac gcgcgcgggc ttcatcgccg gcgacatctc gaccgtgatg
     1681 tcgccgcgca cggtgatcac ctgggcggag aacgccaaga tctt
//
LOCUS       DASWGA010000835         4670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_621495, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000835 DASWGA010000000
VERSION     DASWGA010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4670
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621495"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1993)
                     /gene="glgP"
                     /locus_tag="VF991_19500"
     CDS             complement(<1..1993)
                     /gene="glgP"
                     /locus_tag="VF991_19500"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HEX9558688.1"
                     /translation="MVALPLPDLPPEISALRALALDLRWTWSHEADALWERVDARLWR
                     RTKNPWSVLQSASAWRLQRLAADAAFRKQLAGFVAARQEYLERPGWFVANYGQAALTR
                     VAYLSMEFGLGAALPLYAGGLGILAGDYLKTASDLDVPALGVGLLYQEGYFRQIVDAD
                     GIQQELYPHNDPAMMPVEPVILEDGGWLRIRLKLPGRMLHLRVWQATVGHVKLYLLDS
                     NDPLNSPADRGITAKLYGGGSEARLMQEIVLGVGGWRVVEALHPDTEICHINEGHAAF
                     AIIERARHFAVKANLTFWQALWATRAGNVFTTHTPVAAGFDSFSPSLLRKYLPLLRRY
                     LPFGGGKSDGRGVTPNDILGLGRIDPLNQDEPFNMAYLAQRGSALCLGVSRLHGEFSR
                     RIFQPLFPRWPASEIPIGYITNGVHMPTWDSIEADTIWTEACGKERWRGMPDKLGERI
                     ACVPDEELWAMRGNGRQRIVGFVRRHLGTQLRERGLDPGLVHQADSVLDPNLLTLGFA
                     RRFTAYKRPNLLLRDPARLDSLLFNDRRPVQLVLAGKAHPADYEGKSMIRAWIDLARQ
                     PRYRSRVVFLEDYDIALAQELVQGVDVWINTPRRPWEACGTSGMKVLVNGGINCSILD
                     GWWDEAYQADVGWAIGDGRGGDAAEVDERDAASLYDTLEQ"
     gene            complement(2080..3384)
                     /locus_tag="VF991_19505"
     CDS             complement(2080..3384)
                     /locus_tag="VF991_19505"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388921.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX9558689.1"
                     /translation="MKKPFHLAWFLSQGWGPKSWRGDWPGSDVERWMMPDLFVDLARG
                     MERACFDYIIIEDSSNVPYTYKGSHDTYLQYAASAPKLDPAVLVPYLAQATKHLGLVP
                     TLSVSEYPPYLMARLVNSLDHVTEGRIGWNCVTGSNDGAAQNYGRDKHLPHDERYDIA
                     DEFADIVTRLWEAWEPDAVVLDRDKPMFANGSKVHPINHEGKYFRCRGPLNAPRSPQG
                     RVPICQAGGSPRGQRFASRWADTIITEGGGSVDSMKAYRDRVRQQAAEYGRNPDDIKV
                     LFLAHPIIDVTMEAARERTRLEQLEAEKHLDLHLSGMSRLTGIDFSKFDLDKPLPDTL
                     TTNGHQSALAKWIGKTPRSILQSYARKAGIDFTGTADHVAGMMQEIMEEVGGDGFLIF
                     NSYFDRRYVIEVCDGLVPELQRRGVTRKAYAHRHLRDNLLEF"
     gene            complement(3381..4085)
                     /locus_tag="VF991_19510"
     CDS             complement(3381..4085)
                     /locus_tag="VF991_19510"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HEX9558690.1"
                     /translation="MTYSIIARCPKTGRLGLGIATFSIGVGGRCEGIMAGVGICKTQA
                     YTNRGNDPLAIELLAQGFGPAHVLGVLEQSDPNHAYRQIAILDREGNGVAHTGSGTRP
                     WSGHKIGAGYVAFGNVLAGPQVIEAIAAGFMAEPDGALELRLLAALEGGRKAGGQVGA
                     EGHLIERSAAVRVVADPDYPDIDVRVDLHDAAVAELRRVLEEFKRYEVFYRERGRDPS
                     TAITQAQFVARLEGRA"
     gene            complement(4086..>4670)
                     /locus_tag="VF991_19515"
     CDS             complement(4086..>4670)
                     /locus_tag="VF991_19515"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HEX9558691.1"
                     /translation="SQAFANERNNALALRLLAQGLGAGLVLSQLMANDRYFDYRQIGV
                     IDRSGTAVAYTGPRTLGWSGHVTGDNHVAFGNGLVGPEVADAIAAGFMAEPDADLEHR
                     LLMGIEAGRDAGGQGTRQEHKAERSAALRVYSQHPYADIDLRVDLHATAVEELRRVWS
                     EYKKYEAYYRDRERNPRGAIGQEAFMATLRAAEA"
BASE COUNT          770 a         1572 c         1514 g          814 t
ORIGIN      
        1 tttgctcgag ggtatcgtac aggctcgccg cgtcgcgctc gtcgacttcc gcggcatcgc
       61 cgccccgccc atcgccgatc gcccagccga cgtcggcctg gtaggcctcg tcccaccagc
      121 cgtcgaggat cgaacagttg atgccgccat tgaccagcac cttcatgccg ctcgtgccgc
      181 aggcttccca cggccgccgt ggcgtgttga tccacacatc gacgccttgg acaagctcct
      241 gtgcgagggc gatgtcgtaa tcttcgagga acacgacgcg gctgcgatag cgcggctggc
      301 gcgccaggtc gatccacgcc cggatcatcg acttgccttc gtagtcggcg gggtgcgcct
      361 tgcccgccag gacgagctgc accggccgcc tgtcgttgaa aagcaggctg tccaaccggg
      421 ccggatccct cagcaggagg ttgggccgct tgtatgcggt gaatcgccgg gcaaagccca
      481 gggtgagcag gttgggatcg agcacgctgt cggcctgatg gacgagtcca gggtcgagtc
      541 cgcgctcgcg tagctgggtc ccgagatgac ggcgcacgaa gccgacgatc cgctgacgtc
      601 cgttgccgcg catcgcccac aactcttcgt ccggcacgca ggcgatgcgc tcgccgagct
      661 tgtccggcat gccccgccag cgttccttgc cgcaggcctc ggtccagatc gtgtccgcct
      721 cgatcgaatc ccaggtcggc atatgaacgc cgttggtgat gtagccgatc ggaatttcgg
      781 aggctggcca gcgtggaaac aaaggctgga agatccgccg gctgaattca ccgtgcaggc
      841 ggctgacacc gagacagagc gcggacccgc gctgcgccag ataagccatg ttgaaaggct
      901 cgtcctggtt caggggatcg atgcggccca accccagaat gtcgttcggc gtcacgcccc
      961 ggccgtccga tttgcctccg ccgaacggca agtacctgcg cagaagcggc aggtacttgc
     1021 gcagcaggct gggcgaaaac gaatcgaaac cggccgccac cggcgtgtgg gtggtgaaga
     1081 cattgccggc gcgcgtcgcc cacagcgcct gccagaaagt cagattcgcc ttgacggcga
     1141 agtgacgcgc ccgctcgatg atggcgaatg ccgcatgtcc ttcgttgatg tggcagatct
     1201 cggtatccgg atggagtgcc tcgacgacgc gccagccgcc gacgccaagc acgatctcct
     1261 gcatcagtcg tgcctcgctg ccgccgccat agagctttgc cgttatgccg cggtcggccg
     1321 ggctgttgag cggatcgttg ctgtccagca aatagagctt cacgtgcccg acggtcgcct
     1381 gccacacgcg cagatggagc atgcgacccg gcagtttgag ccgtatccgc agccatcccc
     1441 cgtcctcgag aatgaccggc tcgaccggca tcatcgccgg atcattgtgc gggtagagct
     1501 cttgctggat gccgtcggcg tcgacgatct ggcgaaaata cccttcctga tacaacagcc
     1561 cgactccaag cgccgggacg tcgagatcgc tggccgtctt cagataatcg ccggccagga
     1621 tgccgagccc gccggcatag agcggcaatg ccgcgccgag accgaattcc atgctgagat
     1681 aggcaacccg ggtaagcgcc gcctggccgt agttcgcaac gaaccatccg ggccgttcga
     1741 gatattcctg ccgcgccgcc acgaagccgg cgagctgctt gcgaaaggca gcatccgcgg
     1801 ccaatcgctg caatcgccac gccgatgcgc tttgcaggac gctccaggga tttttcgtgc
     1861 gacgccacag ccgcgcatcg acgcgctccc aaagagcgtc ggcttcgtgg ctccaggtcc
     1921 agcgcaggtc gagcgcaagc gcccgcaagg cggagatttc cggcggcaga tccggcagag
     1981 gcaatgcgac catgaaatcc gcctctatgt tctttggctt gccgagacta ttttcccggc
     2041 ggaccggctg taaaggcgcc gggctgaaac aatcgccggc tagaattcca ggagattgtc
     2101 gcgcaagtgg cggtgcgcat aggcctttcg cgtcacgccg cggcgctgca gctcgggcac
     2161 cagcccgtcg cacacctcga tgacgtagcg ccggtcgaag tagctgttga aaatcaggaa
     2221 gccatcgccg ccgacctcct ccatgatctc ctgcatcatg cccgccacgt ggtctgcggt
     2281 gccggtgaag tcgatgcccg ccttcctggc atagctctgc aggatcgagc gcggcgtctt
     2341 gccgatccat ttggcgagcg cggattgatg gccgttggtg gtgagcgtgt ccggcagcgg
     2401 cttgtcgaga tcgaacttgg agaagtcgat gccggtaagg cgcgacatcc ccgacagatg
     2461 caggtccaga tgcttctcgg cttcaagctg ctccagccgc gtgcgttcgc gcgccgcttc
     2521 catcgtgacg tcgatgatcg gatgggcgag gaatagcacc ttgatgtcgt cggggttgcg
     2581 gccgtactcg gccgcctgct ggcgcaccct gtcgcgatag gccttcatgc tgtcgacgct
     2641 gccgccgccc tcggtgatga tggtgtcggc ccagcgcgag gcgaagcgct gtccgcgcgg
     2701 cgagccgccg gcctggcaga tcggcacgcg gccctgcggc gagcgcggcg cgttcaaggg
     2761 cccgcggcag cggaagtatt tgccttcgtg gttgatggga tggaccttgc tgccgttggc
     2821 gaacatcggc ttgtcgcgat cgagcaccac tgcgtcgggc tcccacgctt cccacagccg
     2881 ggtgacgatg tcggcgaact cgtcggcgat gtcgtagcgc tcgtcgtgcg gcaggtgctt
     2941 gtcgcggccg tagttctgcg ccgcgccgtc gttgctgccg gtcacgcagt tccagccgat
     3001 gcggccttcg gtgacgtgat cgagcgagtt gaccagccgc gccatcaggt aaggcggata
     3061 ctccgatacc gacagcgtcg gcacgagtcc caggtgcttg gtcgcctggg cgagatacgg
     3121 caccagcacg gccgggtcga gcttgggcgc actggccgcg tattgcagat aggtgtcgtg
     3181 cgagcccttg taggtatagg gcacgttcga ggaatcctcg atgatgatgt agtcgaagca
     3241 ggcccgctcc atgcccctcg ccaggtcgac gaacaaatcg ggcatcatcc agcgctcgac
     3301 gtcgctgccc ggccagtcgc cgcgccagct cttgggcccc cagccttgcg acaggaacca
     3361 ggcgagatgg aagggcttct tcatgccctg ccctccagtc tcgccacgaa ctgggcttgc
     3421 gtgatcgcgg tcgaggggtc gcgcccacgc tcgcgataga acacctcgta gcgcttgaac
     3481 tcctccagga ctcgccgcag ctcggccacg gcggcgtcgt gcaaatcgac cctgacgtcg
     3541 atgtcgggat agtcgggatc ggccaccacg cggacggcag ccgagcgctc gatcaaatga
     3601 ccctcagcgc cgacctggcc gccggccttg cggccgccct cgagcgccgc cagcagccgg
     3661 agttccagcg ccccgtccgg ctcggccatg aacccggcgg cgatcgcctc gatgacctgc
     3721 ggcccggcca gcacattgcc gaaggcgaca tagcccgcgc cgatcttgtg gcctgaccac
     3781 ggccgcgttc ccgatccggt gtgcgctacg ccattgccct cgcgatcgag gatggcgatc
     3841 tgccggtagg cgtgattggg gtcgctctgt tcgagtaccc ccagcacgtg cgccggaccg
     3901 aagccctgcg ccagaagctc gatcgccagc ggatcgttgc cgcgattggt gtaggcctgc
     3961 gtcttgcaga tgccgacgcc cgccatgatg ccctcgcaac gtccgccgac gccgatcgag
     4021 aaagtcgcga tgccgaggcc gagccggccg gtcttggggc agcgcgcgat gatcgagtag
     4081 gtcatctatg cctccgccgc ccgcaacgtc gccatgaagg cttcctgccc gatcgcgccg
     4141 cgtggattgc gctcgcggtc gcgatagtag gcctcgtact tcttgtattc gctccacacg
     4201 cggcgcagct cctcgaccgc ggtcgcatgc agatcgacac gcagatcgat gtcggcatag
     4261 gggtgctgcg aatagacccg caacgccgcc gaacgctcgg ccttgtgctc ctggcgcgtg
     4321 ccctgcccgc cggcatcgcg gccggcttcg atgcccatca gcaggcgatg ctcgaggtcg
     4381 gcgtccggct cggccatgaa accggcggcg atcgcatcgg ccacttccgg tccaaccagc
     4441 ccgttgccga aggcgacatg gttgtcgccc gtcacgtggc ccgaccagcc aagcgtgcgc
     4501 ggcccggtgt aggcgacggc cgtcccgctg cgatcgatga cgccgatctg gcggtagtcg
     4561 aaatagcggt cattggccat cagctgcgac agcaccaagc ccgcccccaa cccctgcgcc
     4621 agcagcctga gcgccagcgc gttgttgcgc tcattggcaa acgcctggct
//
LOCUS       DASWGA010000836         5646 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2501127, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000836 DASWGA010000000
VERSION     DASWGA010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5646
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2501127"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VF991_19520"
     CDS             <1..289
                     /locus_tag="VF991_19520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEX9558692.1"
                     /translation="SYLESVTDDPDGEEGGLGLPGEGEEGESDQLYDQAIALVARERK
                     CSTSFIQRYLQIGYNRAARIVERMEREGVVSPANHVGKREVLARDIDNRER"
     gene            389..2080
                     /locus_tag="VF991_19525"
     CDS             389..2080
                     /locus_tag="VF991_19525"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX9558693.1"
                     /translation="MSDSGKPAELPTAGAQRRRRFPLIWIVPLVTALIAAWLAWDTFS
                     KRGPTIVISFDSAAGLTAGQSQLKYKNVVMGTVKSIGLSPDVTRVLVTVETVHEAVPF
                     LTDKTIFWVVKPELFAGNITGLETLISGSYIGMRPSSEKGATRHHFIGEQDPPVLQAW
                     AKGTTFRLQSKRLGSISLGSPIFFRDLEVGTVLGWQLGDLASDVTIHAFVRAPYDQYV
                     HDDTSFWNASGVSVKFGSQGVSVQMESLRALLLGGVAFDTPSDSKLPVAAADHKFSLY
                     ATFEAAKSAGFGHQLQLISYFPGSVAGLEVGADVTLYGLKVGEVTHVSLVYDPQKDRI
                     VVPVQYRVEAGRIVNMAASQGLDPATLAAEMVKRGLRATLQSPSLITGQKIISLERLP
                     DAPAATLEREGDLFVIPTSEVGGFDSITRSANELLSKINRIDFDRIGKSLSGAAAGLD
                     DTINGPQLKKTLAALEKAMVDVQDITRKLDQDATPAMKRLPEIANQLQDALTKANRLF
                     GSLNTGYGDDSRFRRDLDRLLPQLTDTARSIRALSDLLSRHPEALIQGRTNTGKE"
     gene            2084..2668
                     /locus_tag="VF991_19530"
     CDS             2084..2668
                     /locus_tag="VF991_19530"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiC family protein"
                     /protein_id="HEX9558694.1"
                     /translation="MLLGRRRFTGLALALLAPLALDACSSSPNPNYYSVAVRSGPTFP
                     AGPKIVLLKDIGLASYLDRREIVRSSEGYRLDVMSNDWWGESLGGMLGRVLVLELSQR
                     LPASTVYGESGAIAADHNVMVGVNIQRLDADKAGKLILIAQVAAEFNRPRRMAARTFT
                     LSRPLATQDTPGLVAAISDAMGELADGVAALLQP"
     gene            2665..4062
                     /locus_tag="VF991_19535"
     CDS             2665..4062
                     /locus_tag="VF991_19535"
                     /inference="COORDINATES: protein motif:HMM:TIGR00155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiA/YebS family transporter subunit"
                     /protein_id="HEX9558695.1"
                     /translation="MRLPSFGPRASRPAHAHDAGLEARGPLTTPQLRECPGCGQFQVV
                     PALGPNMRSNCVRCGTVLRLTRADPFNHHLALTFAALLLFGVVWLGMLMRVSAFGIVH
                     ETTLDSGPIELVNRGLWPLALAVAFATALAPLGKFVGTLYVLLGLKLRRLPPNLRGVF
                     LVARRLGTWSMLEVLLLGVFVAFVKLGDLVNIELGPAVYALGVLTIVIVWAELALDPQ
                     AVWEEIERRGQTHAPMPAVAPLDFRPGAAGCESCGLVCVPAESDGRCPRCGARVHERR
                     PDSIVRTWAFVIAAAILYIPANVYPVLTVIQLGAGQPSTILGGVEDLLASGLYPLALL
                     VFFASILVPMFKLIGLSAMLLTTQFAGPDSGAAVLLRERTRLYYVVAWIGRWSMVDIF
                     MESLLGALVQFGRAVTIEPGFGAVAFCAVVFVTIFAAEAFDPRLMWDAAARNAHRPLP
                     SGRARPDTAAATAVS"
     gene            complement(4055..4780)
                     /locus_tag="VF991_19540"
     CDS             complement(4055..4780)
                     /locus_tag="VF991_19540"
                     /inference="COORDINATES: protein motif:HMM:NF022142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2490 domain-containing protein"
                     /protein_id="HEX9558696.1"
                     /translation="MHAFMGRNGRALILALALAAFGAVPAAAQRQQARQQAQQRQIND
                     DFRLSPELGFEYRLSPQWRLTFDTRLVLNQAMSNVHKLEMQPGVEYALSPNWSVAGGY
                     VQYQRLPAQVSTTRGPYEDVAYGTTFGRLEIANRLRMEELFYDNNGALLIRMRYRLSL
                     QHPIPETPWAVLVSNELYFNLKTDGTTLPAGYDRNKLYGGLVVEIGRGAKASAGYELT
                     SYEPRGDLHQVHTLRLGFAFALN"
     gene            4886..>5646
                     /locus_tag="VF991_19545"
     CDS             4886..>5646
                     /locus_tag="VF991_19545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HEX9558697.1"
                     /translation="MAKEILCGFGIDVDAVAGWLGSYGGEDSPDDISRGLFAGEVGSP
                     RLLRMFERLGIKTTWFIPGHSIETFPEEMKAVADADHEIGIHGYSHENPIAMTREQET
                     EILDKCIDLVTRLSGKRPTGYVAPWWEFSPVTNELLLERGIKYDHSLMHNDHQPYYVR
                     VGDRWTKIDYAKKPSEWMVPLQRGRETGLIEIPASWYLDDLPPMMFIKKSPNSHGFVN
                     PRDIEEMWRDQFDWVYREYDYAVFPMTIHPDVSGRP"
BASE COUNT          889 a         1921 c         1841 g          995 t
ORIGIN      
        1 gtcctacctc gaatcggtga ccgacgatcc cgatggcgag gaaggcgggc tcgggctgcc
       61 gggcgagggg gaggagggcg agagcgacca gctctacgac caggcgatcg ccctggtggc
      121 gcgcgagcgc aagtgcagca ccagcttcat ccagcgctac ctgcagatcg gctacaaccg
      181 cgccgcccgc atcgtcgagc gcatggagcg cgagggcgtg gtgagcccgg ccaatcatgt
      241 cggcaagcgc gaggtcttgg cgcgcgacat cgacaatcgg gaacgctgaa agtcacgatg
      301 tttctgcagt gtcagacgcg ccggcggcgg ttgcagaccg gatgatttga gttaccctgc
      361 gggggcgggg acagagcggg accgactaat gagcgacagc ggaaagccgg cagagctgcc
      421 gacggcgggc gcccagcgcc gccggcgctt tccgctgatc tggatcgtgc cgctggtcac
      481 ggccctcatc gcggcgtggc tggcctggga caccttctcc aagcgcggtc ccacgatcgt
      541 catttccttc gacagcgccg ccggcctcac cgcgggccag tcccagctca aatacaagaa
      601 cgtcgtcatg ggcacggtga agagcatcgg cctgtcgccc gacgtgaccc gcgtgctggt
      661 cacagtggag acggtgcacg aggccgtgcc gttcctgacc gacaagacga tcttctgggt
      721 ggtcaagccc gagcttttcg ccggcaacat caccgggctg gagacgctca tctccggttc
      781 ctacatcggc atgcggccat cgagcgaaaa gggcgcgacg cgtcatcatt tcatcggcga
      841 gcaggatccg ccggtcctgc aagcgtgggc caagggcacc actttccggc tgcagagcaa
      901 acggctgggt tcgatcagcc tgggctcgcc gatcttcttt cgcgacctcg aggtcggcac
      961 cgttcttggc tggcagctcg gcgatctggc cagcgacgtc accattcacg ccttcgtgcg
     1021 cgcgccctac gatcagtacg tgcatgacga cacgtccttc tggaacgcct cgggcgtgtc
     1081 ggtgaagttc ggttcccaag gcgtctcggt gcagatggaa tcgctgcgcg ccctgctatt
     1141 gggcggcgtc gccttcgaca cgccgtccga ttccaagctg ccggtggccg cggccgacca
     1201 caagttctcg ctctatgcca ccttcgaggc ggcgaagtcc gcgggcttcg gccaccagct
     1261 tcagctcatt tcctactttc cgggctcggt cgccggcctc gaagtcggcg ccgacgtcac
     1321 cttgtacggc ctgaaggtcg gcgaggtgac ccatgtcagc ctagtctacg acccgcaaaa
     1381 ggatcgcatc gtggtgccgg tgcagtatcg tgtcgaggcc ggtcgcatcg tcaatatggc
     1441 ggcatcgcaa ggcctcgatc cggcgacgct ggcggcggag atggtcaagc gcggcctgcg
     1501 cgccaccttg cagtcgccaa gcctgatcac cggccagaag atcatctccc tggagcgcct
     1561 gcccgatgcg ccggcggcaa cgctcgagcg cgaaggcgac ctgtttgtca ttccgacgtc
     1621 ggaggtcggc ggcttcgaca gcatcacccg ctcggccaac gagcttctgt ccaagatcaa
     1681 ccggatcgat ttcgaccgca tcggcaagag cctgtccggc gccgcggcgg ggctggacga
     1741 caccatcaac ggcccgcagc tcaagaagac cctggcggcg cttgagaagg cgatggtcga
     1801 cgtccaggac atcacccgca agctcgacca ggatgccacg ccggcgatga agcgcctgcc
     1861 cgaaatcgcc aaccagctgc aggacgcgct gaccaaggcc aaccgcctgt tcggctcgct
     1921 caacaccggc tacggcgacg attcgcgctt tcgccgcgac ctcgatcgcc tgctgccgca
     1981 gctcaccgat acggcccgct cgatccgcgc gctgagcgac ctgctgtcgc ggcatcccga
     2041 ggccttgatc cagggccgca ccaacaccgg caaggaataa tcgatgttgc ttggccgccg
     2101 ccgcttcacc ggccttgcgc tggcgctgct agcaccgctg gctctggacg cctgcagttc
     2161 ctcgcccaat ccgaactact actcggtcgc cgtccgcagc gggccgacct ttccggccgg
     2221 tcccaagatc gtgctgctga aggatatcgg gctggcaagc tacctcgacc gccgcgagat
     2281 cgtgcgctcc tccgagggct acaggctcga cgtcatgtcg aacgattggt ggggcgagtc
     2341 gttgggcggc atgctgggcc gcgtgctggt gctcgagctt tcgcagcgcc tgccagccag
     2401 cacggtctat ggcgaaagcg gcgccatcgc cgccgaccat aacgtcatgg tcggcgtcaa
     2461 catccagcgg ctcgatgccg acaaggccgg aaagctgatc ctgatcgccc aggtcgccgc
     2521 cgaattcaac cggccacgcc gcatggcggc gcgcaccttc accctctcca ggccactggc
     2581 gacgcaggac actcccggcc tggtggcggc gatcagcgat gccatgggcg aactcgccga
     2641 cggcgtcgcg gcgttgctgc agccgtgagg ctcccgtcat ttggaccgcg ggcctccagg
     2701 cccgctcatg ctcatgatgc gggcctggag gcccgcggtc cgctgaccac gccgcagctt
     2761 cgcgaatgtc ccggctgcgg ccagttccag gtcgtgccgg cgctcgggcc caacatgcgt
     2821 tccaactgcg tgcgctgcgg caccgttctg cggctcaccc gcgccgatcc gttcaaccat
     2881 cacctggcgc tcaccttcgc tgccctgctg ctgttcggcg tcgtgtggct cggcatgctg
     2941 atgagggtct cggccttcgg catcgtgcac gagacgacct tggactccgg gccgatcgaa
     3001 ctggtcaacc gcggcctgtg gccgttggcg ctggccgtcg ctttcgccac ggcgttggcg
     3061 ccgctgggca aattcgtggg cacgctctac gtgctgctcg ggctgaagct gcgccgcctg
     3121 ccgcccaacc tgcgcggtgt cttcctggtg gcgcgccggc tcggcacgtg gtcgatgctc
     3181 gaagtgctgc tgctcggtgt gttcgtggcc ttcgtcaagc tcggcgacct ggtgaacatc
     3241 gaactcggtc ccgccgtcta tgcgctgggc gtgctcacca ttgtcatcgt ctgggccgag
     3301 ctggcgctcg acccccaggc ggtgtgggag gagatcgagc gccgtggcca gacccatgcg
     3361 ccgatgccgg cggtggcgcc cctcgacttc cgacccggcg cggcgggctg cgagagctgc
     3421 ggcctggtct gcgtgccggc cgagagcgac ggccgttgcc cgcgctgcgg tgcgcgggtc
     3481 catgagcgca ggcccgacag tatcgtacgc acctgggcct tcgtgatcgc cgccgccatc
     3541 ctctacattc ccgccaacgt ctatccggtg ctcaccgtca tccagctcgg cgccggccag
     3601 cccagcacca tcctgggcgg cgtcgaggac ctgcttgcct cgggcctcta cccgctggcg
     3661 ctgctggtgt tcttcgcctc gatcctggtg ccgatgttca agttgatcgg gctttcggcc
     3721 atgctgctga cgacccagtt cgccggtccc gactcgggcg ccgccgtgct gctgcgcgag
     3781 cgcacgcgac tctactatgt ggtggcgtgg atcggccgct ggtcgatggt cgatatcttc
     3841 atggaatcgc tgctcggggc gctcgtccag ttcggccgcg ccgtcaccat cgagcccggc
     3901 ttcggcgccg tcgccttctg cgccgtggtc ttcgtcacca tcttcgccgc cgaagccttc
     3961 gatccgcgcc tgatgtggga cgccgccgcc cgcaacgccc atcgcccgct gccgtcggga
     4021 cgcgcgcgtc ccgacaccgc ggcggcgacc gccgtcagtt gagggcgaag gcgaagccga
     4081 gcctaagcgt gtgcacctgg tggagatcgc cgcgcggctc gtaggaggtg agctcgtagc
     4141 ccgccgacgc cttggcgccg cgcccgattt ccacgaccag cccgccatag agcttgttcc
     4201 ggtcgtagcc ggccggcagc gtcgtgccgt cggtcttgag attgaagtag agctcgttcg
     4261 acaccaggac ggcccacggc gtttccggga tcgggtgctg aaggctgagc cgataccgca
     4321 tgcggatcag cagcgcgccg ttgttgtcgt aaaacagctc ttccatgcgc agccggttgg
     4381 cgatctccag ccggccgaac gtcgtgccgt aggcgacgtc ctcgtacggc ccgcgggtgg
     4441 tcgagacctg ggccggaagg cgctggtact ggacgtaacc ccccgcgacc gaccagttcg
     4501 gcgagagggc gtactccacg ccgggctgca tttcgagttt gtgcacgttg ctcatcgctt
     4561 ggttgaggac caagcgggta tcgaacgtca gccgccactg cgggctcagg cggtactcga
     4621 agcccaattc cggcgatagc ctgaaatcgt cgttaatctg ccgttgctgg gcctgctgtc
     4681 gcgcctgttg gcgttgtgcg gcagcgggaa cggcgccgaa ggccgccagt gcgagggcca
     4741 ggatcagggc ccggccgttc ctgcccatga acgcgtgcat gactggcctc tactatcaca
     4801 aatctgtcat gcattgggtc tgcagccttg cctgccggaa cgcttcttgc tggtttgcct
     4861 cgactggacc tcgaggagca gcaagatggc caaggaaatt ctgtgcggct tcggcatcga
     4921 cgtcgacgcc gtggcgggct ggctcggcag ctatggcggt gaggattcgc cggacgacat
     4981 ctcgcgcggc ctgttcgccg gcgaagtcgg cagccccagg cttctcagga tgttcgagcg
     5041 gctgggcatc aagaccacct ggttcatccc cggccattcg atcgagacct ttcccgagga
     5101 gatgaaggcg gtggccgacg ccgaccacga gatcggcatc cacggctaca gccacgagaa
     5161 cccgatcgcc atgacgcgcg agcaggagac cgagatcctc gacaagtgca tcgatctcgt
     5221 caccaggctc tcgggcaagc ggccgaccgg ctacgtggcg ccgtggtggg agttctcgcc
     5281 ggtcaccaac gagctgctgc tcgagcgcgg catcaagtac gaccactcgc tgatgcacaa
     5341 cgatcaccag ccgtactacg tgcgcgtcgg tgaccgctgg accaagatcg actacgccaa
     5401 gaagcccagc gaatggatgg tgccgctgca gcgcggccgg gagaccggcc tgatcgagat
     5461 cccggcgagc tggtatctcg acgacttgcc gcccatgatg ttcatcaaga agtcgcccaa
     5521 cagtcacggc ttcgtcaatc cgcgcgacat cgaggagatg tggcgcgacc agttcgactg
     5581 ggtctatcgc gaatacgact atgcggtgtt ccccatgacc atccatcccg acgtgtcggg
     5641 tcggcc
//
LOCUS       DASWGA010000837         4901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_861267, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000837 DASWGA010000000
VERSION     DASWGA010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4901
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_861267"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..1321
                     /locus_tag="VF991_19550"
     CDS             194..1321
                     /locus_tag="VF991_19550"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9558698.1"
                     /translation="MREQRSGTAALVAACLLAAFAGSPSRAQQGAPPPAVLVQPAILK
                     PIASQAEFIGRAAAVDKVELRARVKGFLGPRKFSDGDEVKKGQVLFTIEPEPYQAAVD
                     QKIAQRDAARAALTNAELQLKRAAELLRTNTGTQVTYDQRLSEQLQAKAQLEDANAQV
                     RDAEIQLSYTEIKSPIDGRIGRASASPGNIVGPDSGILATVVSENPIRVLFPVTQREL
                     LEARRDSSASDPPIVRVRLADGTLYKEKGKLDFIDVTVDPKTDGQIVRATFDNKDSTL
                     TDGQTVRVVIEDANAPSVVAIPQAAIAIDQAGSYVYVINDKNVAEQRRVKTGVSRDGM
                     VAVTEGLKAGEKVIIQGQQRVRPGMTVTPTVAPPAAAAAKQ"
     gene            1326..4487
                     /locus_tag="VF991_19555"
     CDS             1326..4487
                     /locus_tag="VF991_19555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HEX9558699.1"
                     /translation="MTISSLFIRRPRLAFVVSTVITIAGLIAMTALPVAQFPDIVPPQ
                     VSVATLYPGASAQAVEESVAQVIEAQVNGVERMLYMKSTSGGDGSYGLSVSFEVGSDP
                     DLNTVNVTNRVNQALALLPPEVQRNGVTTRKQSSALLQVVAVYSPKGSKDGLFLSNFA
                     TINLLDTLRRVPGVGNASLFGTLDYAMRVWLNLERMASLDITANDVVKAVQAQNVQAA
                     VGLVGAAPLMDNVDFQLNITTQGRLTTVEEFENIVVRATPDGALVKVKDIARVELGSK
                     SSDSIGRYNGKPATGIQTFQLPGANALATAQGVRKALKELESRFPDDVAYDVMYDTTV
                     FVQATIKSVITTLIEAFVLVSIVVFVFLGNLRATIIPVIAVPVALIGTFAVMLAMGFS
                     ANTISLLALVLAIGIVVDDAIVVVEAVEHILEHEPGLTPAEATEKAMGQVTGPIIAIT
                     LVLLSVFIPTAFIPGISGKLYQQFAVAVSVSMIISAINALSLSPALCSLILRHRQKSK
                     GIMAWMQNGIDRSRAGYVRLVTPLARRGLVALLLVAGFVAATGGLGVLVPQGFLPDED
                     QGAFMAEVQLPDAASTSRTLAAVDEVEAAIEGKPWLKSIFTVTGYSLLDGLALPNRAL
                     VVVAMKPFDERKDAKLSVFHALEEMNTAFTQIASANVFAFNLPPIMGLGNSAGFEFQL
                     QSLAGAPPTELAAVARGLMVAAQQVPQLDSVFTTYGAATPQINLKLDRERAQALGVSI
                     SDIFSALQTAMGGTYTNDFNLFGRTWQVKVQAEAADRATVNDVYRVRVRSSSGELVPL
                     QAVADVELITAPSSVIRYNNLRSVTLNGAPAPGYSSGDAIAAMERLAVTTLPAGYGYE
                     WTGTALQEKAASGQTGFILGLAVVFAYLFLVGLYESTAIPLAALLSVTVGLFGALAAL
                     YVSGLDNNIYAQIGIVVLIALAAKNAILIIEFAMAERAQGKDIVTAATTAAALRFRAV
                     MMTSFAFILGLVPLVIASGAGAATQRAVGTAVFGGMIAASCLGIFVIPGLYVAFQTFR
                     EKVKGMGRNPKPAEPAPGDSTVR"
     gene            complement(4473..>4901)
                     /locus_tag="VF991_19560"
     CDS             complement(4473..>4901)
                     /locus_tag="VF991_19560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9558700.1"
                     /translation="FVASAAAAEKLAFRPCLKCRPETAPGSAAWRGTATTVARGMRLI
                     QSGFLDAHDVDQLAGKLGIGPRHLSRLFRRHVGASPSDVAGTRRVQIAKRLVTDTARP
                     LGEIALEAGFRSVRRFNDAFRKTYKRPPSSLRRGRTLSNR"
BASE COUNT          842 a         1706 c         1550 g          803 t
ORIGIN      
        1 cggattctgg aagctcttgc gatcctgggc ggcgagatcg cttgccacga cggcaaccgc
       61 cagcatcaac gccagaacga accaacgcac cactgccaat gcaattcctt tccctgctgc
      121 gattggaaat accgtgacgg ttttgtcgaa ttaaggcagt gtccgaaggt tactacgagc
      181 ggggacgaag acaatgcgtg agcagcgttc aggaacggca gcgctcgtcg cggcatgcct
      241 gttggcggca tttgcgggct cgcctagccg cgcccagcag ggcgccccgc cgcccgccgt
      301 gctggtgcag cccgccatcc tgaagccgat cgcgtcgcag gccgagttca tcggccgcgc
      361 cgccgccgtc gacaaggtcg agctgcgcgc ccgcgtcaag ggcttcctcg gcccgcgcaa
      421 gttcagcgac ggcgacgagg tgaaaaaagg tcaagtcctg ttcaccatcg aaccggaacc
      481 ctaccaggcg gcggtcgacc agaagatcgc ccagcgcgat gccgcgcgcg ccgcgctgac
      541 caacgccgag ctgcaactca agcgtgccgc cgagctgttg cgcaccaaca ccggcacgca
      601 ggtgacctac gaccagcggc tgagcgaaca gctccaggca aaggcgcagc tcgaggacgc
      661 caacgcccag gtgcgcgacg ccgagatcca gctgtcctac accgagatca agtcgccgat
      721 cgacggccgc atcggccgcg cctcggcgtc gcccggcaac atcgtcggac ccgacagcgg
      781 catcctggcc accgtggtga gcgagaatcc gatccgcgtg ctctttccgg tgacgcaacg
      841 cgaactgctc gaagccaggc gcgatagcag cgccagcgac ccgccgatcg tgcgagtgcg
      901 actggccgac ggcaccctct acaaggaaaa gggcaagctc gacttcatcg acgtcaccgt
      961 cgaccccaag accgatggcc agatcgtgcg cgcaactttc gacaacaagg acagcacgct
     1021 gaccgacggc cagaccgtgc gcgtggtcat cgaggatgcg aacgcgccgt ccgtggtcgc
     1081 catcccgcag gcggccatcg ccatcgacca ggcgggctcc tacgtctacg tcatcaacga
     1141 caagaacgtg gccgagcagc gccgagtgaa gaccggcgtg tcgcgcgacg gcatggtcgc
     1201 cgtcaccgag ggactgaagg cgggcgagaa ggtgatcatc cagggccagc agcgtgtgcg
     1261 gccgggcatg accgtgacgc cgacagtggc gcccccagct gccgccgcgg cgaagcagtg
     1321 atcccatgac gatctcgtcg ctgttcatcc gccggccgcg gctcgccttc gtcgtctcga
     1381 cggtcatcac catcgccggc ctgatcgcca tgacggcgct gccggtggcg cagtttcccg
     1441 acatcgtgcc gccgcaggtt tcggtcgcca ccctttaccc cggcgcctcg gcccaggcgg
     1501 tcgaggagag cgtcgcgcaa gtcatcgagg cgcaggtcaa tggcgtcgag cgcatgctct
     1561 acatgaaatc gacctcgggc ggtgatggca gctacggtct ctccgtcagc ttcgaggtcg
     1621 gatccgaccc cgacctcaac accgtgaatg tgaccaatcg cgtcaaccag gcgctggcgc
     1681 tgctgccacc cgaggtgcag cgcaatggcg tcaccaccag aaaacagtcc tcggcgctcc
     1741 tccaggtggt cgcggtctat tcgcccaagg gcagcaagga cgggctattc ctgtccaact
     1801 tcgccaccat caacctcctg gacacgctgc gccgcgtgcc gggtgtgggc aatgcctcgt
     1861 tgttcggcac gctcgactac gccatgcgcg tgtggctgaa cctcgagcgc atggcgagcc
     1921 tcgacatcac cgccaacgac gtggtcaagg cggtgcaggc gcagaacgtg caggccgcgg
     1981 tcggcctggt cggcgccgcg ccgctgatgg acaacgtcga tttccagctc aacatcacca
     2041 cccagggccg gctcaccacc gtcgaggaat tcgagaacat cgtggtgcgc gccacccccg
     2101 acggggcact ggtcaaggtc aaggacatcg cccgggtcga gctcggctcc aagtccagcg
     2161 attcgatcgg ccgctacaac ggcaaacccg ccaccggcat ccagaccttc cagctccccg
     2221 gcgccaatgc gctcgctacc gcccagggcg tgcgcaaggc gctgaaggag ctcgaatcgc
     2281 gctttcccga cgatgtcgcc tatgacgtga tgtacgacac caccgtgttc gtccaggcga
     2341 cgatcaagag cgtcatcacg acactgatcg aagctttcgt gctggtctcg atcgtggttt
     2401 tcgtcttcct cggcaacctg cgcgccacga tcatcccggt cattgccgtg ccggtggccc
     2461 tgatcggcac cttcgccgtc atgctggcga tgggcttctc ggccaatacg atctcgctgc
     2521 tggcgctggt gttggcgatc ggcatcgtcg tcgacgatgc cattgtcgtg gtcgaggctg
     2581 tcgaacacat cctggaacac gagcctggcc tgacgccggc cgaggcgacc gagaaggcga
     2641 tgggccaggt cacggggccg atcatcgcca tcacgctcgt gctgctgtcc gtcttcatcc
     2701 cgaccgcctt cattcccggc atctcgggca agctctacca gcagttcgcg gtggccgtgt
     2761 cggtgtcgat gatcatctcg gccatcaacg cgctgtcgct ctcgcccgcg ctctgttccc
     2821 tgatcctgcg ccatcgccag aagtccaagg gcatcatggc ctggatgcag aacggcatag
     2881 accgaagccg cgccggttat gtccggctcg tgacaccgct cgcccgccgc ggtctcgtcg
     2941 ccctgctgct ggtcgcgggc tttgtcgccg ctaccggcgg actcggcgtg ctggtgcctc
     3001 agggctttct gcccgacgag gaccaaggcg ccttcatggc agaggtccag cttcccgacg
     3061 ctgcttcgac cagccgcacg ctggccgcgg ttgacgaggt cgaagccgcc atcgaaggca
     3121 agccgtggct caagagcatc ttcacggtga ccggatacag cctgctcgat ggcctcgcac
     3181 tgcccaaccg ggcgctggtc gtggtcgcca tgaagccgtt cgacgagcgc aaggacgcca
     3241 agctctcggt cttccacgcc ctggaggaga tgaacacggc cttcacccag atcgcgtcgg
     3301 ccaacgtctt cgccttcaac ctgccgccga tcatgggtct cggcaattcg gcgggcttcg
     3361 agttccagct ccagagcctc gccggtgcgc cgccgaccga gctcgccgcc gtggcgcgcg
     3421 gcctgatggt ggcggcccag caagtgccgc agctcgacag cgtgttcacg acctatggtg
     3481 ctgcgacgcc gcagatcaac ctcaagctcg accgcgagcg cgcccaggcc ctgggcgtca
     3541 gcatctccga catcttctcg gccctgcaga ccgccatggg cggcacctac accaacgact
     3601 tcaacctgtt cggccgcacc tggcaggtga aggtgcaggc cgaggcggcc gaccgcgcca
     3661 ctgtcaacga cgtctatcgt gtgcgcgtgc gctcctccag cggcgagctg gtgccgttgc
     3721 aggcggtggc cgacgtcgag ttgataaccg ctccctcgtc ggtcatccgc tacaacaatc
     3781 tgcggtcggt gacgctgaac ggcgcgccgg cgcccggcta ttcctcgggc gacgccatcg
     3841 ccgccatgga gcgcctggcc gtgaccacgc tgcccgccgg ctacggctac gaatggacgg
     3901 gcacggcctt gcaggaaaag gcggcgagcg gccagacggg attcatcctc gggctagcgg
     3961 tcgtcttcgc ctacctgttc ctggtcggcc tctatgaaag cacggcgatt cctctggccg
     4021 cccttctgtc ggtcacggtt ggcctgttcg gcgccctggc ggcgctctat gtgagcgggc
     4081 tcgacaacaa catctacgcc cagatcggca tcgtcgtgct gatcgcgctt gcggccaaga
     4141 acgccatcct gatcatcgag ttcgccatgg cggagcgcgc gcagggcaag gacatcgtga
     4201 cggcggcgac gaccgccgca gccttgcgct tccgcgccgt gatgatgacc tccttcgcct
     4261 tcatcctggg cttggtgccg ctggtcatcg cctcgggcgc cggtgccgcc acccaacgcg
     4321 cggtcggcac cgccgtgttc ggcggtatga tcgcggcttc gtgcctcggc attttcgtga
     4381 tcccgggcct gtacgtggcc ttccagacgt tccgcgagaa agtcaaaggc atgggacgca
     4441 atccgaagcc ggcggaaccc gcgcccggag actcaacggt tcgatagcgt gcgccctcgg
     4501 cggaggctag acggcggacg cttataagtc ttgcgaaagg catcgttgaa acggcggacg
     4561 ctgcggaagc cggcctccag ggcgatctcg ccgaggggcc gagcggtgtc ggttacaagc
     4621 cttttcgcga tctgaacccg ccgcgtgcca gcgacatcgc tcggcgaagc gccgacatgc
     4681 cgccggaaaa gccgcgacag gtgtcgggga ccgatgccga gcttgcccgc caattggtcg
     4741 acgtcgtggg cgtctaaaaa acccgactga atcaggcgca tgccacgcgc gacggtcgtc
     4801 gccgtgccgc gccaggccgc gctgcccggg gccgtctcgg gccggcactt caagcaaggg
     4861 cgaaaggcca gcttctcggc ggccgcggcg ctcgccacga a
//
LOCUS       DASWGA010000838         1800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_621933, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000838 DASWGA010000000
VERSION     DASWGA010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621933"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1587)
                     /locus_tag="VF991_19565"
     CDS             complement(1..1587)
                     /locus_tag="VF991_19565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558701.1"
                     /translation="MIKTSFAIAAAAAAGLSLAQPAFGQSDDKKLGKVNFETSCKPEA
                     QKLFNRAMLYQHSFWYRASQQAFEDVLKADPECGIAYWGIALSLLWNPHVPAPAKNLA
                     EGAAALAKAKSVGAKSQRERDYLDALGAVYADFEKANHSTRMQAYAKAMEQLAQRYPS
                     DDEAQIHYALALNTSASPADKTYANQLKGAAILEPIFKRQPQHPGVAHYLIHLYDAPP
                     IAEKGLEAARRYAKIAPGAAHAQHMPSHIFTRVGYWQESIASNIVSQRVAKESKDFHD
                     QLHSMDYLVYAYLQLGQDKKAKAVIDEMMTVTGFTETFLPGPYALAVSPARYAIDRGD
                     WKAASELQVRPSPLAHVQAITHFARALGAARSGNPEAAKADIAKLGELRDKLRQAKDA
                     YWSEQVDIQVQVASAWVLYAEGKHDDALKAMSAAADAEDKTEKHPVTPGVPKPARELY
                     GVMLLERGNAKEALAAFEATLKKEPNRLGAYVGAATAAEKSGDNAKARDYYKKILATA
                     GGADKTRTEVADARASLKKH"
BASE COUNT          307 a          542 c          568 g          383 t
ORIGIN      
        1 tcagtgcttc ttcagggacg cgcgcgcgtc ggcaacctcg gtccgggtct tgtccgcgcc
       61 accggcggtc gcgaggatct tcttgtaata gtcccgagcc ttggcgttgt caccggactt
      121 ttcggcggcc gtggccgcgc ccacataagc gccgagccgg ttcggctcct tcttcagcgt
      181 cgcttcaaag gcggcgagcg cctccttggc attgccgcgc tcgagcagca tgacgccata
      241 gagttcgcgc gccggcttgg gcacgcccgg cgtcaccgga tgcttttcgg tcttgtcctc
      301 ggcatcggcg gcggcgctca tggctttcag cgcgtcgtcg tgcttgccct cggcatagag
      361 cacccaggcg gaggcgacct gcacctggat atcgacctgc tcggaccaat aggcgtcttt
      421 ggcctgacgc agcttgtccc gcagctcgcc gagcttggcg atgtccgcct tggcggcttc
      481 aggattgccc gagcgggccg ctccgagtgc gcgcgcaaaa tgcgtgatgg cctgcacgtg
      541 agccagcggg ctcggccgaa cctgaagctc cgaagcggcc ttccagtcgc cgcggtctat
      601 cgcgtagcgc gccggcgaaa cggcaagcgc atatgggccg ggaagaaaag tttcggtgaa
      661 gccggtgacc gtcatcatct cgtcgatgac ggccttggcc ttcttgtcct gcccgagttg
      721 cagataggca tagaccaggt agtccatgga atgcagctgg tcgtggaaat ccttggattc
      781 cttcgcgaca cgctgcgaga cgatgttgga ggcgatcgac tcctgccaat atccgacgcg
      841 ggtgaagatg tgcgacggca tatgttgcgc gtgcgccgcg ccgggggcga tcttggcgta
      901 acgcctggcc gcttcgagcc ctttctccgc aataggcgga gcatcgtaga gatggatcag
      961 gtaatgcgcc acgcccggat gctgcggctg gcgcttgaag atcggttcta gaatagccgc
     1021 ccctttgagc tgattggcat aggtcttgtc ggccggcgaa gccgaggtgt tgagcgcgag
     1081 cgcatagtgg atttgcgcct cgtcatcgct cggatagcgt tgtgccaact gttccatcgc
     1141 cttggcatag gcttgcatac gcgtgctgtg gttggccttt tcgaaatccg cgtacacggc
     1201 gcccagcgcg tcgagatagt cgcgctcgcg ttggctcttg gcgccgacgc tctttgcctt
     1261 cgccagcgcg gcagcaccct cggcgagatt cttcgcgggc gccgggacgt gcgggttcca
     1321 gagcaggctc aacgcaatgc cccaataggc gatgccgcac tcgggatcgg ccttcaacac
     1381 atcctcgaat gcttgttgcg acgcgcggta ccagaacgag tgctggtaca gcatcgcgcg
     1441 gttgaacagc ttctgcgctt ccggcttgca cgatgtttcg aaattcacct tgccgagctt
     1501 cttgtcgtcg gattgtccga acgccggttg cgcgagcgaa agtcccgccg cggccgcagc
     1561 ggcaattgcg aatgacgttt tgatcatgat ccagctcctg gtcagcatcg gatttcgacc
     1621 gagcgtagag cattttccgg cgaagtgtga aacggttcgc cgcagaaaat gcgacatatc
     1681 taaagaatct agagcatgtc ccaattccag cagatcggga catgctctag cggagcattg
     1741 tggcaatcac tcgaggctga ctatgcattt tccgcatcgg tatgcaaaag tcgtcgagaa
//
LOCUS       DASWGA010000839         2143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1237820, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000839 DASWGA010000000
VERSION     DASWGA010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1237820"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VF991_19570"
     CDS             complement(<1..325)
                     /locus_tag="VF991_19570"
                     /inference="COORDINATES: protein motif:HMM:NF045350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558702.1"
                     /translation="MPLPFVDRSSSSLPVQFVARPKWRAWLKEQSAVRRGWIESSGIA
                     GSAGDLVVLPGRDGTAAGAVLVLSAKPTLWDFGALATRLPAGTWRLASDTAPVPATDA
                     AVAIGL"
     gene            427..1095
                     /locus_tag="VF991_19575"
     CDS             427..1095
                     /locus_tag="VF991_19575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014766328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9558703.1"
                     /translation="MADFTLVIGNKNYSSRSLRGWLMAKTAGIEFEEIVVPLDLPETQ
                     PTIRKHSPSGRLPVLLHRGLAVWESLAIAEYLNELKPEAGLWPAAVAARAHARAISSE
                     MHAGFADLRNNMPVNIRASYPGKGLTPAVRADIERITSMWRDCRKRFAGAAPKDDGFL
                     FGTFGAADAMYAPVVTRLRTYGVTVDSDSDAYCKAVLAHPAMKEWTDAAKNEPWLIAA
                     YELA"
     gene            complement(1139..1402)
                     /locus_tag="VF991_19580"
     CDS             complement(1139..1402)
                     /locus_tag="VF991_19580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558704.1"
                     /translation="MAIQYFARVKSASDHEAFQRIVRHYPSCSYEEWHFREAKKMADW
                     RSRRHVCKMVDITPAEFSEYCERTGAKPDISTFLKVLSDKAVF"
     gene            1566..1961
                     /locus_tag="VF991_19585"
     CDS             1566..1961
                     /locus_tag="VF991_19585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018898983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin Xre-like helix-turn-helix
                     domain-containing protein"
                     /protein_id="HEX9558705.1"
                     /translation="MEAAMPSSRSLAKAKPDKAAVLTKAVLRAASHLGLSNKVLAAVI
                     GLSEATVSRMRAGEYMLQPGHKPFELAVLFVRLYRSLDAIVGGDDAVAGSWLKNRNTL
                     LDAEPLALMQTVSGLMNVIQYLDARRAVV"
     gene            1921..>2143
                     /locus_tag="VF991_19590"
     CDS             1921..>2143
                     /locus_tag="VF991_19590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES domain-containing protein"
                     /protein_id="HEX9558706.1"
                     /translation="MSSSTSTPAGLSSDTLSSDAGALAGICWRLVEAQHRVSTLKLVD
                     SVDEQETLEDLIQASKPSVPPECQHLHYLL"
BASE COUNT          388 a          710 c          681 g          364 t
ORIGIN      
        1 cgagaccgat cgcaaccgcg gcgtccgtcg ccgggaccgg cgcggtgtcc gacgccagcc
       61 gccaggtgcc ggccggcagc cgggtcgcca gtgcgccgaa atcccacaag gtcggcttgg
      121 ccgacagcac aaggactgca cctgcagccg tgccgtcacg gcccggcaac acgacgagat
      181 cgccggcact gccggcgatg cctgacgatt cgatccagcc gcgccgcacc gcgctttgtt
      241 ccttgagcca agcccgccat ttcggccggg cgacaaactg cacgggaaga gaagaagagg
      301 agcgatcgac gaaaggcaac ggcatggaca tgctcaccaa actgtagtgc aaggagtaac
      361 attgccggcc aaagtgatcg gctggcaagg gacgcgactg gtaagcgacg ttaaacggga
      421 gggcgtatgg ccgacttcac cctcgtgatc ggcaacaaga actattcgtc gcggtcgctg
      481 cgcggttggc tgatggccaa gaccgccggc atcgagttcg aggagatcgt ggtgcccctc
      541 gacctgccgg agacgcagcc gacgatccgc aagcactcgc cctccggccg cttgccggtg
      601 ctgctgcatc gcgggctcgc cgtctgggag tcgctggcga tcgccgaata cctcaacgaa
      661 ctcaagcccg aggccggact gtggccggcc gccgtggcgg cgcgcgcgca tgcccgcgcc
      721 atctcgagcg agatgcatgc gggcttcgcc gacctgcgca acaacatgcc ggtcaacatc
      781 cgcgcgtcct atcccggcaa gggcctgacg ccggcggtgc gcgccgacat cgagcgcatc
      841 acctcgatgt ggcgcgactg ccgcaagcgc ttcgccggcg cggcgcccaa ggatgacggc
      901 ttcctgttcg gcaccttcgg cgcggccgac gccatgtatg caccggtcgt gacgcggctg
      961 cgcacctatg gcgtgacggt ggattccgac tccgacgcct actgcaaggc ggtgctcgcc
     1021 catccggcga tgaaggaatg gaccgacgcg gccaagaacg agccgtggct gatcgcggcc
     1081 tacgaactcg cgtaggcctc aggcgccgcg tagaggcttt ccagccgaga ggaaatccct
     1141 aaaagaccgc cttgtcggag aggaccttca gaaaagtgct gatgtcgggc tttgccccgg
     1201 tgcgctcgca atattcgctg aactcggcgg gcgtgatgtc gaccatcttg cagacatgcc
     1261 ggcggctcct ccagtcggcc atcttcttgg cttcgcgaaa gtgccattcc tcgtagctgc
     1321 aggacgggta gtgccgcacg atccgctgga aggcctcgtg gtccgaggcg gatttgactc
     1381 gcgcaaaata ctgaatcgcc atcgtgttct ttccctgaat gcgcacgagt gctgcggacg
     1441 ctcgccgacg cccggtcgcg cgctttctag cccgcgacgc cgagacctgc cagcgtccat
     1501 ggcgcttcaa gccatgttaa gctacctttc ctcagaaagg atactggtat attattgcac
     1561 cagaaatgga ggctgccatg ccctcatcga gatcccttgc caaagccaag ccggacaaag
     1621 ccgcggtcct gaccaaggcg gtcctccggg cggccagcca tctcggcctg agcaacaagg
     1681 tgctcgcggc ggtgatcggc ctctccgaag cgaccgtctc gcgcatgcgc gccggcgagt
     1741 acatgcttca gccagggcac aagccgttcg agctcgcggt gctttttgtc cgcctctacc
     1801 gttcgctgga tgcgatcgtc ggcggcgacg atgcggttgc aggctcgtgg ctcaagaaca
     1861 ggaataccct gctcgatgcc gagccgcttg ccctcatgca gaccgtttcg gggctgatga
     1921 atgtcatcca gtacctcgac gcccgccggg ctgtcgtctg acacgctgtc gtccgatgcc
     1981 ggcgcgctgg ccggcatctg ctggcggctt gtcgaggcgc aacatcgtgt ctcgacgctg
     2041 aagctcgtcg attcggtcga cgagcaggag acgctcgaag acctgataca ggcgagcaag
     2101 ccgtcagtgc cgcccgagtg ccagcatctg cactaccttc tgt
//
LOCUS       DASWGA010000840         2886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1111037, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000840 DASWGA010000000
VERSION     DASWGA010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2886
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1111037"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..951
                     /locus_tag="VF991_19595"
     CDS             <1..951
                     /locus_tag="VF991_19595"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558707.1"
                     /translation="DYPAWYRRHGGAVLSMAINKYCYIGTGFLPPFFGIRHRIIWSHI
                     EPVGAIAEIQHPAVRAGLQVLGFDDSEGVELFHQGDLPARSGIGSSSAFAVGLMNVLN
                     AMRGKQLDAHALAVSATDLEQNKLKESVGCQDQIASAYGGMNVIKFERDDSFSITPVG
                     LSETQRGDFEKWLMLFYTGSSRISSEFAKRLISKLDANAEHMTRMRDMVEVAVDMLHA
                     GRLAEFGQLLHESWALKRRLTDGTSTTMIDRTYDDARRAGALGGKLLGAGGTGFMVFV
                     VPPDRQAAVRAALSHLITVPISTDFTGSTIVYRKEELLSS"
     gene            1052..1576
                     /gene="rfbC"
                     /locus_tag="VF991_19600"
     CDS             1052..1576
                     /gene="rfbC"
                     /locus_tag="VF991_19600"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: protein motif:HMM:NF013103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEX9558708.1"
                     /translation="MTAAMEVFTTKLESVLLIKPPTVFEDFRGHYIETYNRNAYFTAG
                     IPIDFIQDDISVSHRHVLRGIHGDSTTWKLISCLQGSFYLVVVNNDPNSSQYREWAAF
                     TLSDSNRLQILVPPNFGNGHLVMSERAIFHYKQSTEYDRAGQFTLLWNDPALKIWWPI
                     DNPILSERDQGHRR"
     gene            complement(1564..2757)
                     /locus_tag="VF991_19605"
     CDS             complement(1564..2757)
                     /locus_tag="VF991_19605"
                     /inference="COORDINATES: protein motif:HMM:NF018877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AGE family epimerase/isomerase"
                     /protein_id="HEX9558709.1"
                     /translation="MPARLTSAADALRDWATGAALPLWATAGFDVQPGRFEERLTLRA
                     ERLPDVPLRLMSQARQIYAYAVAARRGWYPDAGQLVEHAYASMVRDYHGRDDRSGWIF
                     SIRRDGAVADARRDLYTHAFVLLAIAAYVKATGKHQALGLADETLGFIERHMTAPQGG
                     GFVEELPSAGGSRRQNPHMHLFEAMLLLWECSGDARYLARAGTLFDLFASRFFRSDPG
                     VLGEHFTPSLTPAEGIAGRVVEPGHHYEWIWLLRRFERASGRSMQRYVDALYAHADRH
                     GFDEAGLIVDELLIDGSHHKRSRRIWPIAEAIRANVVEARWARAGSAAKAASLAVRLR
                     QRFLTTDPAGGWFDKLDADGACISRFMPASTLYHLVGAIDELDQPAASASDARQGAME
                     SVQRR"
BASE COUNT          538 a          951 c          907 g          490 t
ORIGIN      
        1 gactacccgg cctggtaccg caggcatggc ggcgccgtgc tgtcgatggc catcaacaaa
       61 tactgctaca tcggcaccgg cttcttgccg ccgttcttcg gcatccgcca tcgcatcatc
      121 tggtcgcata tcgagccggt cggtgcgatc gccgagatcc agcatcccgc cgtgcgcgcc
      181 ggtctgcagg tgctgggctt cgacgacagc gagggcgtcg agcttttcca tcagggcgac
      241 ctgccggcac gctccgggat cggctcgagc tcggccttcg ccgtcgggtt gatgaacgtg
      301 ctgaacgcca tgcgcggcaa gcagctcgac gctcatgcgc tcgccgtgag cgccaccgac
      361 ctcgagcaga acaagctcaa ggaaagcgtc ggctgccagg accagatcgc cagcgcctac
      421 ggcggcatga acgtcatcaa gttcgagcgc gacgactcgt tctcgatcac gcccgtgggc
      481 ctcagcgaga cccagcgcgg cgatttcgag aaatggctga tgctcttcta tacgggcagc
      541 agccgcatct cctcggagtt tgccaagaga ctgatcagca agctcgatgc caatgccgag
      601 cacatgacgc gcatgcgcga catggtcgag gtggccgtcg acatgctgca tgccggccga
      661 ctggccgaat tcggccagct cctgcacgaa agctgggcgc tgaaacggcg cctgaccgac
      721 ggcaccagca cgacgatgat cgaccgcacc tacgacgacg cgcggcgcgc cggtgcgctg
      781 ggcggcaagc tgctcggcgc cggcggcacg ggcttcatgg tgttcgtggt gcctccggat
      841 cgccaggccg ccgtgcgcgc cgcgctgtca catctcatca cggtgccgat ttccaccgac
      901 ttcacgggct cgacgatcgt ctatcggaag gaagaattgc tgtcatcctg agcgcagcga
      961 aggatctcat gccgattgca gccggcatgc tcgttgaaat gccatgaggt ccttcgctgc
     1021 gctcaggacg acggaaatag ggagcgaggg aatgacagca gcaatggaag tgttcaccac
     1081 caaactcgaa tcggtgctgc tgatcaagcc gccgacggtc ttcgaggact ttcgcggtca
     1141 ttacatcgag acctacaatc gcaacgccta cttcaccgcc ggcattccga tcgacttcat
     1201 ccaggacgac atttcggtgt cgcaccgcca cgtgctgcgc ggcatccacg gtgacagcac
     1261 gacctggaag ctgatctcct gcctgcaggg cagcttctac ctggtggtgg tcaataacga
     1321 tccgaactcg tcgcagtacc gcgaatgggc ggcgttcacc ctctcggaca gcaatcgtct
     1381 gcagatcctg gtgccaccga acttcggcaa cggacacctg gtgatgagcg agcgggcgat
     1441 cttccactac aagcaaagca ccgagtacga ccgcgccggc caattcacgc ttttgtggaa
     1501 cgatccggca ctgaagatct ggtggccgat cgacaatccg atcctgtccg aacgcgacca
     1561 gggtcatcgt cgctgaacgg actccatcgc accctgcctg gcgtcgcttg ccgacgcggc
     1621 cggctgatcc agttcatcga tcgcgccgac caggtggtac aacgtgctgg ccggcatgaa
     1681 tcgactgatg cacgcgccgt cggcgtcgag cttgtcgaac cagccgccgg cgggatcagt
     1741 cgtcaagaac cgttggcgta accggacggc cagggaagct gcctttgccg cagatcctgc
     1801 gcgcgcccat cgagcctcga cgacgtttgc ccggatcgct tcggcgatcg gccagatgcg
     1861 gcgcgatcgc ttgtggtggg agccgtcgat gagcagctca tcgacgatca gacccgcctc
     1921 gtcgaatccg tgtcgatcgg cgtgcgcgta gagcgcgtcg acatatcgct gcatcgagcg
     1981 gccgctggcg cgctcgaagc gccgcagcag ccagatccat tcatagtgat ggcccggttc
     2041 cacgaccctg ccggcgatgc cttccgccgg cgtcagggag ggcgtgaaat gttcaccgag
     2101 aacgcccgga tcggaccgaa agaagcgcga ggcgaagaga tcgaagagcg tgccggcacg
     2161 cgccaggtat cgggcatcgc ccgaacactc ccacagcaaa agcatcgctt cgaacagatg
     2221 catgtgcggg ttctgccggc ggctgccgcc ggccgacggc agctcctcga cgaagccacc
     2281 gccttgtggt gcggtcatat ggcgttcgat gaaccccagg gtctcgtcgg ccagaccaag
     2341 cgcctggtgc tttcccgttg ctttgacata cgccgcgatt gccagaagca cgaaggcgtg
     2401 ggtgtaaaga tcccggcgcg catcggccac tgcgccatcg cgccggatcg agaatatcca
     2461 accgcttcga tcgtcccgtc cgtgatagtc ccgcaccatc gaggcatagg cgtgctcgac
     2521 cagttggcct gcgtcggggt accagcctct cctggccgcc acggcgtagg cgtaaatctg
     2581 gcgcgcctgc gacatcaacc taaggggaac gtcgggcaac cgctcggcac gcaacgtcaa
     2641 ccgctcctcg aatcgtccgg gctggacgtc gaaacctgcg gtcgcccaca gcggaagggc
     2701 cgcgccggtt gcccagtcgc gaagggcgtc cgccgccgaa gtgagccgtg ctggcatccc
     2761 gaagaacgcc tctggtcgcg agcctaggct gccgagatcg cgtcggcgac acgctcgccg
     2821 ggtatggcga cgacgttggc cgagagcggg tcgccgtcgc gcggccgttc aagtaggccg
     2881 gtcacc
//
LOCUS       DASWGA010000841         1689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1623566, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000841 DASWGA010000000
VERSION     DASWGA010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1623566"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            216..1178
                     /gene="fmt"
                     /locus_tag="VF991_19610"
     CDS             216..1178
                     /gene="fmt"
                     /locus_tag="VF991_19610"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEX9558710.1"
                     /translation="MKLGFLGTSEFAVPALGALVDAGHDVIAVYTRAPKPAGRGQQER
                     RTPVHERALALGLPVRTPKSLRSDDEAQAFKALDLDAAVVVSYGHILPKSFLDAPVLG
                     CINIHGSLLPRWRGAAPIHRAILAGDAETGVTTMRMDEGLDTGPMLLAERTPISAADT
                     AETVHDRLAELGARLIVSTLDGLVAKTIEAVPQPAEGVTYAHKLGKEEGALDWRRPAA
                     ELERKVRAFHPWPGTWFEATSEEGGERIKLLEAGLALAGGAPGTVSVARDGFPIVACG
                     VGGLKLLKLQRAGRSAQPADAFLRGFALPAGTVLAPPAVVPLPT"
     gene            1185..>1689
                     /locus_tag="VF991_19615"
     CDS             1185..>1689
                     /locus_tag="VF991_19615"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine synthase A"
                     /protein_id="HEX9558711.1"
                     /translation="MACYKLTIEYDGAPFVGWQRQDNGPSVQVALEEAVLAFSGERAI
                     VQGAGRTDAGVHALGQVAHLDLANERPAETVRAALNFHLKPHPIAVVEAEIVPGDFHA
                     RFSATWRRYRYRILNRRAPPAFDRGHVWHVPVPLAVDAMADAAAALVGHHDFNSFRSA
                     SCQAPSPV"
BASE COUNT          237 a          593 c          598 g          261 t
ORIGIN      
        1 gcgatggcgg cgagctggtc gtagaccgcc tgcagccgct gcacgacccg ttcctgcacc
       61 ggatcgggat ggacttcgcc cgcggcgcgg cgggcggcta ggttggcggc ggggcctttg
      121 cccttgatca agggggcccc gatagagggc atcgctgctt ccattgtcgg cgcataccta
      181 gctcaccggc gcgcggctgc ctataaggtc cggcgatgaa gctcggcttt ctcggcactt
      241 ccgaattcgc cgtgccggcg ctcggcgcgc tggtcgacgc cggtcacgac gtgatcgccg
      301 tctacacgcg cgcgcccaag cccgccggtc gcggccagca ggagcgccgc acgccggtgc
      361 acgagcgcgc gctggcgctc ggcctgccgg tgcgcacgcc caagagcctg aggagcgacg
      421 acgaagcgca ggcgttcaag gcgctcgatc tcgacgcggc cgtggtcgtc tcctatggcc
      481 acatcctgcc caaaagcttt ctcgatgcgc cggtgctggg gtgcatcaat atccacggct
      541 cgctgctgcc gcgctggcgc ggcgcggcgc ccatccatcg cgccatcctc gcgggagacg
      601 ccgagaccgg cgtcaccacc atgcgcatgg acgaaggact cgacaccggc cccatgctgc
      661 tggccgagcg cacgccgatc tcggccgccg acacggccga gacggtgcac gaccggctgg
      721 cggaactggg cgcgcggctc atcgtgtcga ccctggacgg gctggtggcg aagaccatcg
      781 aggcagtgcc tcagccggcg gaaggcgtca cctacgccca caagctcggc aaggaggaag
      841 gcgcgctcga ctggcgacgg ccggccgccg agctcgagcg caaggtgcgc gcgttccatc
      901 cctggcccgg cacctggttc gaagccacaa gcgaggaagg cggcgagcgc atcaagcttc
      961 tcgaagccgg gttggcgctg gctggcggcg cgccggggac ggtgagcgtg gcgcgcgatg
     1021 gtttcccgat cgtcgcctgc ggtgtcggcg ggttgaagct tttgaagctg cagcgcgccg
     1081 gcaggtcggc gcaaccggcg gatgccttcc tgcgcggctt tgccctgccg gccggcacgg
     1141 tgctggcgcc gccggccgtc gttccgttgc cgacctgagg gcgcgtggcg tgctacaagc
     1201 tcaccatcga atatgacggc gcgccgttcg tcggctggca gcgccaggac aatggcccgt
     1261 cggtgcaggt cgctctcgag gaggcggtgt tagccttcag cggagagcgc gcaatcgtgc
     1321 agggggcggg acgcaccgat gccggcgtcc atgcgctggg ccaagtggcg cacctcgatc
     1381 tcgcgaacga gaggccggcc gaaacggtgc gggccgcgct caactttcat ctaaagcccc
     1441 atccgatcgc cgtcgtcgaa gccgagatcg tgccgggcga cttccatgcc cgtttttcgg
     1501 cgacctggcg gcgctatcgc taccggatcc tgaaccggcg cgcgccgccc gccttcgatc
     1561 gcggccatgt ctggcacgtt ccggtgccgc ttgctgtcga tgccatggcc gacgccgccg
     1621 cggcgctggt cggccaccat gacttcaaca gcttccggtc ggcttcctgc caggcgccct
     1681 cgcccgtca
//
LOCUS       DASWGA010000842         4063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1623638, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000842 DASWGA010000000
VERSION     DASWGA010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4063
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1623638"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..649)
                     /locus_tag="VF991_19620"
     CDS             complement(<1..649)
                     /locus_tag="VF991_19620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase-like protein"
                     /protein_id="HEX9558712.1"
                     /translation="MNALASRYLGLDLAHPIIASASPMTATFDGMRRLEDANAAVVVM
                     ASLFEEQVRAEDTRYAMFTEYTAHSSAEAASYFPQLPDYRYGVSGHLETLRRAAEALD
                     IPVIASLNGVTDDGWLDYAVQLEQAGAAALELNLFLLPTDPAVSGADVEHRYLDIVGH
                     VKRKVGIPVSVKLPPYVSAVANFVARLESIGTDGVVLFNRFYRPDLDVRTLSVQRR"
     gene            complement(652..>4063)
                     /gene="nifJ"
                     /locus_tag="VF991_19625"
     CDS             complement(652..>4063)
                     /gene="nifJ"
                     /locus_tag="VF991_19625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEX9558713.1"
                     /translation="VQQMQSEGGAAGAVHGSLQSGALTTTFTASQGFLLMLPNMYKIA
                     GELTSCVFHVAARAVATQALSIFGDHSDVMSARMTGFALLSASSVQEAHDLALVAQAA
                     TLEARVPIVFFFDGFRTSHEENTTTLIPDEQIRAMIDDDLVRAHRARAMSPERPTLRG
                     TAHNPDTFFQARETVNPYYDKVPGIVQKAMDRLAKLTGRPHRLFRYAGHPEAERVVVA
                     IGSAVEVLDETAAWLEANAGEKVGVLKVALYRPWDGEAFLAAMPRSVKAVAVLDRTKE
                     VGAPGEPLYVDVISTYARASSAGKIASMPRIVGGRYGLSSKDFDPAMAKAVFDELKKA
                     EPKHGFTVGITDDVMHTSLPVDRHFDIEGPDTVRAMFYGLGADGTVGANKNSTKILAS
                     EPGRYAQGYFVYDSKKSGSYTISHLRFGSKPIRAPYLLKSANFVGVHKFDYLFKIDTL
                     AAAAQGATVLINSPFGPAEVWNELPRTVQQQIIDKRLKLHVIDASKVAFSLGLGSRTN
                     TLLQTCFFALSGVMPRDEAIAAIKKATEKTYARKGKEVIRKNFEAIDAALANLFEVKI
                     PGAVTGTLEPYKMVPDNAPAFVRDVTSVMLGLHGDDLPVSALPVDGVYPTATAQYEKR
                     NIAEEVPVWDPDLCIQCGQCAVVCPHSVIRAKYYHADHLADAPAGFKAAPINARGYPD
                     SRYTLEIYVEDCTGCGVCVENCPSHAADKFDIRAINMKPRLPEVEPARKSIEFFEKLP
                     WADRTQVDFANVRGAQFLQPLFEFSGACAGCGETPYLKMLSQLFGDRLQIANATGCSS
                     IYGGNLPTTPWAKNREGRGPAWANSLFEDNAEFGLGYRLAIDKQTELAHVLARKLAPQ
                     IGEDLVRALIEAPQVTESDFRTQRQRVVALKDKLAPLGADDVAANLIALADHFVRRSV
                     WLVGGDGWAYDIGYGGLDHVLASGRNVNVLVLDTEMYSNTGGQASKATPIGASAKFAA
                     AGKRTPRKDLALMAIAYGNVYVAQISMGANSEQALIAMREAEAYPGPSLILCYSQCIS
                     HGIDMRFGMKQAARATASGYWPLFRFDPTMRQRDMNPFRLDSTRPRIPLEEYRYNEVR
                     FKSLTQTRPDDARRMLAQAQLELEEKYRIYEDMAARDGSRFHPHWEDV"
BASE COUNT          671 a         1289 c         1403 g          700 t
ORIGIN      
        1 gccggcgttg cacactgagc gtcctcacgt ccaaatcggg ccgatagaag cgattgaaca
       61 gcaccacgcc gtccgtgccg atcgattcga gtcgggcgac aaagttggcg actgcgctga
      121 catagggcgg cagcttgacc gaaaccggga ttcccacctt gcgtttcacg tggccgacaa
      181 tgtcgagata gcgatgctcg acatccgcgc cgctcaccgc gggatcggtg ggcaggagga
      241 agagattgag ctcgagggcc gcggcccccg cctgctcgag ctggacggca tagtccagcc
      301 agccgtcgtc ggtgacgccg ttcaggctgg cgatcaccgg gatgtcgagc gcctcggccg
      361 cgcgccgcag cgtctcgaga tggcccgaga cgccgtaacg gtagtcgggc agctggggaa
      421 agtagctcgc cgcctcggcg ctggaatgcg ccgtgtactc ggtgaacatg gcgtagcgcg
      481 tgtcctcggc gcggacctgc tcctcgaaca gcgacgccat cacgacgacg gcggcgttgg
      541 cgtcttccag gcgtcgcatg ccgtcgaagg tcgccgtcat cggcgacgcc gatgcgatga
      601 tcggatgcgc gaggtcgagg ccgagataac ggctggcaag tgcgttcatg atcagacgtc
      661 ctcccagtgc gggtggaaac ggctgccgtc gcgggccgcc atgtcctcgt agatgcgata
      721 cttctcctcg agctcgagct gcgcctgggc gagcatgcgg cgcgcatcgt cgggccgtgt
      781 ctgggtcagc gacttgaagc gcacctcgtt gtagcgatac tcctccaggg gaatgcgcgg
      841 gcgcgtcgag tcgagccgga agggattcat gtcccgctga cgcatggtcg gatcgaaccg
      901 gaacaagggc cagtagccgc tcgcggtggc gcgcgccgcc tgcttcatgc cgaaccgcat
      961 gtcgatgcca tgcgagatgc actgcgagta gcaaaggatc agcgacgggc cgggataggc
     1021 ttccgcctcg cgcatggcga tcagcgcctg ctcgctgttg gcgcccatcg atatctgcgc
     1081 cacgtagacg ttgccatagg cgatcgccat cagcgcgaga tccttgcgtg gagtacgctt
     1141 gccggcggcg gcgaatttgg cggaagcgcc gatcggcgtc gctttcgacg cctggccgcc
     1201 ggtgttggag tacatctcgg tatccagcac caggacattg acgttgcggc cagaggccag
     1261 tacgtggtcg aggccgccgt agccgatgtc gtaggcccag ccatcgccgc cgacgagcca
     1321 taccgagcgc cggacgaagt ggtcggcaag cgcgatgagg ttggcggcga catcatcggc
     1381 gcccaacggc gcaagcttgt ccttcagggc cacgacccgc tggcgctggg tgcggaagtc
     1441 cgactcggtg acctgcgggg cctcgatcag tgcgcgaacc agatcctcgc caatctgggg
     1501 cgcgagcttg cgcgccaaca cgtgggcgag ctcggtctgc ttgtcgatgg ccaggcgata
     1561 gccgagcccg aactcggcat tgtcctcgaa cagcgagttt gcccacgccg gcccgcgccc
     1621 ttcgcgattc ttcgcccacg gggtggtcgg cagattgccg ccgtagatcg aggagcatcc
     1681 ggtcgcgttg gcgatctgca ggcggtcgcc gaaaagctgc gacagcatct tcaggtacgg
     1741 cgtctcgccg caccccgcgc aggcaccgct gaactcgaac agcggctgca ggaactgcgc
     1801 gccgcgcaca ttggcgaaat ccacctgcgt gcggtcggcc cacggcagtt tttcgaagaa
     1861 ctcgatgctc ttgcgcgccg gctcgacctc gggcagccgc ggcttcatgt tgatcgcgcg
     1921 gatgtcgaac ttgtcggcag cgtgggacgg gcagttttcg acgcacacgc cgcagccggt
     1981 gcagtcctcg acgtagatct ccagcgtata gcgggagtcc gggtagccgc gggcgttgat
     2041 cggagcggcc ttgaatccgg ccggcgcgtc ggccagatgg tccgcgtggt agtacttggc
     2101 gcggatgacg ctgtgcgggc agaccaccgc gcattggccg cactggatgc agagatcggg
     2161 atcccagacc ggcacttcct cggcgatatt gcgcttttcg tactgcgccg tcgccgtcgg
     2221 atagacgccg tccaccggca gggcgctgac cggcagatcg tcgccgtgca ggcccagcat
     2281 gaccgaggtc acgtcgcgga cgaaggcggg ggcgttgtcg ggcaccatct tgtagggctc
     2341 gagcgtgccg gtcacggcgc cggggatctt gacctcgaac aggttggcca gtgccgcatc
     2401 gatggcctcg aagttcttcc tgatcacctc cttgcccttg cgggcgtagg tcttctcggt
     2461 ggccttcttg atcgcggcga tcgcctcgtc gcgcggcatc acgccggaca gggcgaagaa
     2521 gcaggtctgc agcagggtgt tggtgcgcga gcccaacccc agcgagaaag ccaccttcga
     2581 cgcgtcgatg acgtgcagtt tgagccgctt gtcgatgatc tgttgctgca ccgtgcgcgg
     2641 cagctcgttc cagacctcgg ccgggccgaa cgggctgttg atcagcaccg tggcgccctg
     2701 ggccgcggcg gcgagcgtgt cgatcttgaa cagatagtcg aacttgtgca cgccgacgaa
     2761 gtttgccgac ttcagaagat agggcgcacg aatgggcttc gaaccgaagc gcagatggga
     2821 gatcgtgtac gaacccgact tcttggagtc gtagacgaag tatccctggg cgtagcggcc
     2881 aggctcggag gcgaggatct tggtcgagtt cttgttggcc ccgaccgttc cgtcggcgcc
     2941 cagcccgtag aacatcgccc gcacggtgtc cggtccttcg atgtcgaaat ggcgatcgac
     3001 cggcaggctg gtgtgcatca cgtcgtcggt gatgccgacg gtgaagccat gcttgggttc
     3061 ggccttcttc agctcgtcga acaccgcctt ggccatcgcc ggatcgaagt ccttcgacga
     3121 caggccgtag cggccgccga cgatcctcgg catcgaggcg atcttgcccg cgctgctggc
     3181 ccgcgcgtag gtcgagatca cgtcgacata gagcggctcg cccggcgccc cgacctcctt
     3241 ggtgcgatcg agcacggcta ccgccttcac gctcctcggc atggcggcga gaaaggcctc
     3301 gccgtcccac ggccgataga gcgccacctt cagtacgccc accttctcgc cggcattggc
     3361 ctcgagccag gcggcggtct cgtcgaggac ctccacggcc gagccgatgg cgacgacgac
     3421 tcgctcggcc tcgggatggc cggcgtagcg gaacagccga tgaggacgcc cggtcagctt
     3481 ggccaggcga tccatcgcct tctgcacgat gccggggacc ttgtcgtaat acgggttgac
     3541 ggtttcgcgg gcctggaaaa aggtgtcggg attgtgcgcc gttccgcgca gcgtcggacg
     3601 ttccggcgac atcgcgcggg cgcgatgggc gcgcaccagg tcgtcgtcga tcatggcgcg
     3661 gatctgctcg tcggggatga gggtggtggt gttctcctcg tgcgaggtcc ggaagccatc
     3721 gaagaagaag acgatgggca cgcgggcctc cagcgtcgcc gcctgcgcca ccagcgcaag
     3781 atcgtgcgct tcctggacgg aggaggccga gagcaaggcg aagccggtca tgcgcgcgct
     3841 catgacgtcg gaatggtcgc cgaagatcga cagcgcctgg gtcgcgacgg cacgcgccgc
     3901 gacatggaac acgcacgagg tgagctcgcc cgcgatcttg tacatgttag gcagcatcag
     3961 caggaaaccc tgcgaggcgg tgaaagtcgt ggtcagcgcg ccgctttgca gggagccatg
     4021 gacggcgccc gcggcgccgc cctcggactg catctgctgc acg
//
LOCUS       DASWGA010000843         1560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2237973, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000843 DASWGA010000000
VERSION     DASWGA010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2237973"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VF991_19630"
     CDS             complement(<1..278)
                     /locus_tag="VF991_19630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016919359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HEX9558714.1"
                     /translation="MTLHKPTGVALAVAIAMLAPSLAAQQPSPSWNGFYAGLNAGGIW
                     SSTSAPFGMNNTGGELDGVGSGFAGGAQAGYNYLMGPVLLGAEIDFQGS"
     gene            471..>1560
                     /locus_tag="VF991_19635"
     CDS             471..>1560
                     /locus_tag="VF991_19635"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecQ family ATP-dependent DNA helicase"
                     /protein_id="HEX9558715.1"
                     /translation="MSDALSTASALLHSVFGFSEFRPGQEEIVRAVLTGENVLAVMPT
                     GSGKSLCYQLPAIARPGLTLVVSPLIALMRDQVRALSAAGVAAGSLNSSNEPAETARV
                     LGLLRRRELRLLYVAPERLARPDMVEMLAESHVTLMAIDEAHCVSQWGHDFRPEYLTL
                     GSLARQIGGRLQTLALTATADAPTRGDIVDKLFAAPPRVFVRSFDRPNLRLAFKPKER
                     SARQALAFVAAHQGESGIVYCASRRKVEELATALAAAGVRALPYHAGLDKAVRDANQD
                     AFQQEDGVVMTATVAFGMGIDKPDVRFVCHADLPANVEAYYQEIGRAGRDSLPADTLT
                     LYSLGDIELRRRQIEEGDKTPERRRIEQD"
BASE COUNT          260 a          527 c          517 g          256 t
ORIGIN      
        1 gagccctgga agtcaatctc ggcgccaagc aggacgggcc ccatgaggta gttgtaaccg
       61 gcctgagcgc cgcccgcgaa gccgctgccg acgccgtcga gttcgccgcc ggtattgttc
      121 atgccgaagg gtgccgacgt cgagctccat atgccgccag cattgagacc ggcatagaag
      181 ccgttccacg acgggctggg ctgctgtgcg gcgagggaag gcgccagcat cgcgattgca
      241 accgcaaggg cgacgccggt cggtttgtgc agggtcatgc tactactcca ctactgttga
      301 ccctgagcga tacgcgacga tcatcggaga tcttcctact gcgacggcag ccggcgcgtg
      361 tatgtggctg cgccgacacg aaccgttggt gaatcgaatg gggctgaatt gcgtcgcgtg
      421 cttcttccac atgcgacgtg cgctcgagcg atgatactgt gaccgggaaa atgtccgacg
      481 ccctgtccac cgcatcagcc ctgctgcatt ccgtcttcgg cttcagcgag tttcgtcccg
      541 gccaggaaga aatcgtgcgc gccgtgttga cgggcgagaa cgtgctcgcg gtgatgccga
      601 cgggcagcgg caagtcgctg tgctaccagc ttcccgccat cgcccggccg ggcctcactt
      661 tggtggtgtc gccgctgatc gcgctgatgc gcgaccaggt gcgcgcgctc agcgctgcgg
      721 gcgtcgcggc gggcagtctc aattcgtcca acgaaccagc cgagactgcg cgcgtgctcg
      781 gtctgctgcg ccggcgcgag ctgcgtttgc tctatgtcgc accggaacgg ctggcgcggc
      841 ccgacatggt cgagatgctg gccgaaagcc acgtcacgct gatggcgatc gacgaagcgc
      901 attgcgtctc gcaatggggc cacgattttc ggcccgagta cctcacgctg ggcagcctcg
      961 cgcgccagat cggcggccgc ctgcagacgc tggcgctgac cgcgacggcc gacgcgccga
     1021 cgcgcggcga catcgtcgac aaattgttcg ccgcgccgcc gcgcgtgttc gtccggagct
     1081 tcgaccggcc gaacctcagg ctcgccttca agcccaagga gcgttccgcg cgccaggcgc
     1141 tggccttcgt ggctgcccac caaggcgaaa gcggcatcgt ctattgcgcg tcgcgccgca
     1201 aagtcgagga gctggccacc gccctggcgg cggccggagt ccgcgcgttg ccctatcacg
     1261 ccgggctcga caaggcggtg cgcgatgcca accaggacgc cttccagcaa gaggacggcg
     1321 tggtgatgac cgccaccgtc gccttcggca tgggcatcga caagcccgac gtgcgtttcg
     1381 tctgccatgc cgacctgccg gccaatgtcg aagcctacta ccaggagatc ggccgcgccg
     1441 gccgcgacag cctgcccgcc gacacactga cgctttacag cctcggcgac attgaattgc
     1501 gccgccgcca gatcgaggaa ggcgacaaga cgccggagcg tcgccgcatc gagcaggaca
//
LOCUS       DASWGA010000844         3910 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_737661, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000844 DASWGA010000000
VERSION     DASWGA010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3910
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_737661"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1273
                     /gene="gatB"
                     /locus_tag="VF991_19640"
     CDS             <1..1273
                     /gene="gatB"
                     /locus_tag="VF991_19640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEX9558716.1"
                     /translation="NERCVEQAVRTGLGLNARINLRSVFDRKNYFYADLPAGYQISQY
                     KDPIVGEGVVEIDLPDGQTRKVGIERLHLEQDAAKSLHDQHPSQTYVDLNRSGVALME
                     IVSKPDMRSADEAAAYLTKLRSIVRYLGTCDGNMDEGSMRCDVNVSVRKPGGELGTRC
                     EIKNVNSIRFVKQAIEYEARRQVELIEDGGRIVQETRLFDPGRGETRSMRSKEDAHDY
                     RYFPDPDLLPLVLTTDYVEKIKASLPELPDARKNRFINDYGLSPYDAGVLVAEKDTAE
                     FFETVAQGRDAKRATNWVTGDLFAMLNRRGVGIGESPVSARSLGKLLDLIADGTISGR
                     IAKDLFVAMEETGKDPAALVEERGLKQVTDTGAIEAAIKAVIDANPGQLAAYKAKPTL
                     FGWFVGQVMKSTGGKANPKVVNELLKKALDG"
     gene            complement(1239..3167)
                     /locus_tag="VF991_19645"
     CDS             complement(1239..3167)
                     /locus_tag="VF991_19645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEX9558717.1"
                     /translation="MNAPVESYGLIGDCQTAALVGLDGSIDWLCWPRFDSDACFAALL
                     GKPSNGRWLITPSCEAVDVSRRYRRDTLVLETTFRTESGSATLIDFMLPRGHTSDLIR
                     VVRGDEGEVPMCMELVLRFGYGLTIPWVSRLEDGTLRAVAGPDMVALRTPVALWGENF
                     KTAAMFTVAKGKTVPFVLSYGPSHLPVPQPVVAEAALEDCVKFWCDWTATTKCDGLHG
                     EAIKRSLITLKALTYAPSGGIVAAPTTSLPEREGGSRNWDYRYCWIRDSTLTLLALMN
                     AGVYDEATAWRDWLQRAVAGNPADMQIMYGIMGERRLTEWEVEWLPGYLDSKPVRIGN
                     AAHQQFQLDVYGELMDTFEQARKSALAPAESGWELQRALVKHVDLTWAEPDYGIWETR
                     GPPRHFTYSKVMAWVAFDRAIKAVERHGLPGPVDEWRVTRARIHAEICALGFDAERNT
                     FRSAYGETTLDASLLLLAQVGFIDCQDPRYLGTLEAIEKSLLVDGFVKRYNTAEADDG
                     LEPGEGAFLACSFWLADAYVSVGRQEDADRVFKRLLSIRNDLGLLAEEYNAENGRLVG
                     NFPQAFSHVGLINTAFNLTRAVRPAEQRAKVNGSGVQSSEAPKPPQRPGTGPPVAEPG
                     SQNVSRDLSRPEPSSKAR"
     gene            complement(3164..>3910)
                     /locus_tag="VF991_19650"
     CDS             complement(3164..>3910)
                     /locus_tag="VF991_19650"
                     /inference="COORDINATES: protein motif:HMM:NF028222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558718.1"
                     /translation="VGEWDMCRNGLYTERGIKAVDGYGAERIRLEPDYAVKVLPALGA
                     SGVLLEPASVLAKAWDHIERIGRRTKSWRPKSALITGAGPVGLLAALMAVQRGLELHV
                     LDLAESGPKPVLVRALGGTYHARDLPKDLDADITIECTGAPQLVIDVMCRAGGNGVVC
                     LTGGSTGGRTIAFDPGNFNRSMVLQNDVVFGSVNANRRHYEAGAAALAAADPAWLASL
                     ITRRVPLARWAEAFERRDEDIKVVLMFEEP"
BASE COUNT          665 a         1299 c         1323 g          623 t
ORIGIN      
        1 caacgagcgc tgcgtcgagc aggccgtgcg caccgggctg gggctcaatg cccggatcaa
       61 cctgcgctcg gtgttcgatc gcaagaacta cttttatgcc gacctgccgg cgggctacca
      121 gatctcgcag tacaaggatc cgatcgtggg cgagggcgtg gtcgagatcg acctgcccga
      181 cggccagacg cgcaaggtcg gcatcgagcg cctgcatctg gagcaggatg ccgccaagag
      241 cctgcacgac cagcatccca gccagaccta cgtcgacttg aaccgctcgg gcgtggcgct
      301 gatggagatc gtgagcaagc ccgacatgcg cagcgccgac gaggccgccg cctatctcac
      361 caagctgcgc tcgatcgtgc gctatctcgg cacctgcgac ggcaacatgg acgagggctc
      421 gatgcgctgc gacgtcaacg tctcggtgcg caagccgggc ggcgagctgg gcacgcgctg
      481 cgagatcaag aacgtgaact cgatccgctt cgtcaagcag gccatcgaat acgaggcgcg
      541 gcgccaggtc gagctgatcg aggacggcgg caggatcgtg caggagacgc gtctgttcga
      601 tcccggccgc ggcgagacgc gctcgatgcg ctccaaggag gatgcccacg actaccgcta
      661 cttccccgat cccgacctgc tgccgctggt cctgaccacg gactatgtcg agaagatcaa
      721 ggccagcctg cccgagctgc ccgacgcccg gaagaaccgc ttcatcaacg actatggcct
      781 gtcgccctac gatgccggcg tgctggtggc ggagaaggac acggcggagt tcttcgagac
      841 cgtcgcccag ggccgcgatg ccaagcgggc gaccaactgg gtcaccggcg acttgttcgc
      901 catgctgaac cgccgcggcg tgggcatcgg cgagtctccg gtgagcgccc gatcgctcgg
      961 caagcttttg gacctgatcg ccgacggcac gatctcgggc cgcatcgcca aggacctgtt
     1021 cgtcgccatg gaggagacgg gcaaggatcc ggcagcgctg gtcgaggagc gcgggctgaa
     1081 gcaggtcacc gacaccggcg ccatcgaggc cgccatcaag gccgtgatcg atgccaaccc
     1141 cggtcagctc gcggcctaca aggccaagcc cactctgttc ggctggttcg tcggccaggt
     1201 gatgaagtcg accggcggca aggccaatcc caaagtcgtc aacgagcttt tgaagaaggc
     1261 tctggacggc tgagatcacg gctgacgttc tgcgagccgg gctcggccac gggcgggccc
     1321 gtgccgggcc gctgcggcgg cttgggcgcc tccgacgatt gaacgcccga gccattgacc
     1381 ttggcgcgct gctcggcggg gcggaccgcg cgggtcaggt tgaaggcggt gttgatcagg
     1441 ccgacatgcg agaacgcctg cgggaagttg ccgaccagcc ggccattttc cgcattatat
     1501 tcctcggcga gcaggccgag atcgttgcgg atcgacagca ggcgcttgaa caccctgtcg
     1561 gcgtcctctt gtcggccgac cgagacatag gcatcggcga gccagaaact gcaggcgagg
     1621 aaggcgcctt cgccgggttc caggccgtcg tcggcttcgg cggtgttgta gcgtttgacg
     1681 aagccatcga ccaacaggct tttctcgatc gcttcgagcg tgccgaggta gcgcggatct
     1741 tgacagtcga tgaagccaac ttgcgccagc agcagcaggc tcgcgtccag ggtcgtctcg
     1801 ccataggcag agcggaaggt attgcgctcc gcgtcgaagc cgagggcgca gatttcggca
     1861 tggatcctgg cgcgggtgac gcgccactca tcgaccggac cgggcagccc gtgtcgctcg
     1921 accgccttga tggcgcgatc aaacgccacc caggccatca ccttggagta ggtgaaatgg
     1981 cgcggtggac cgcgcgtctc ccagatgccg tagtcgggct cggcccaggt aaggtcgaca
     2041 tgcttgacca gcgcgcgctg cagttcccag ccgctctcgg cgggcgcgag tgcgctcttg
     2101 cgcgcctgtt cgaacgtatc catgagctcg ccatagacat cgagctggaa ttgctgatgc
     2161 gccgcgttgc cgatccgcac cggcttggag tcgagatagc ccggcagcca ctcgacctcc
     2221 cattccgtca atcgccgctc gcccatgatt ccgtacatga tctgcatgtc ggcgggattg
     2281 ccggcgacgg cgcgctgcag ccagtcgcgc catgccgtcg cctcgtcgta gacgccggcg
     2341 ttcatcaagg cgagcagggt gagagtcgaa tcgcggatcc agcagtagcg atagtcccag
     2401 ttgcgcgacc cgccttcgcg ctcaggcagc gacgtcgtgg gcgccgcgac gatgccgccg
     2461 ctcggcgcat aggtcagcgc cttgagcgtg atcagcgagc gcttgatggc ctcgccatgc
     2521 agtccgtcgc acttggtggt ggcggtccag tcgcaccaga acttcacgca atcctccagc
     2581 gccgcctcgg cgacgacggg ctgcggcacc ggcaaatgcg agggcccgta gctcagcacg
     2641 aacggcacgg tcttgccctt ggcgacagtg aacattgcgg cggtcttgaa gttctcgccc
     2701 cacagggcga cgggggtgcg cagcgcgacc atgtcggggc cggcgacggc gcgcagcgtg
     2761 ccgtcctcga gacggctcac ccagggaatc gtgaggccgt agccgaagcg cagcaccagc
     2821 tccatgcaca tcgggacttc gccctcgtcg ccgcggacca cgcggatcag gtccgacgtg
     2881 tggccgcgcg gcagcatgaa atcgatcagc gtggcgctgc cgctctcggt tctgaaggtg
     2941 gtttcgagga ccagcgtgtc gcgccggtag cggcgcgata cgtcgaccgc ctcgcacgac
     3001 ggcgtgatca gccagcggcc gttggagggc ttgccgagca gggcggcgaa gcaggcatcg
     3061 gagtcgaaac gcggccagca cagccagtcg atcgagccgt cgagcccgac cagggcggcg
     3121 gtctggcaat cgccgatcaa cccatagctt tcgaccggcg cgttcatggc tcttcgaaca
     3181 ttagcacgac cttgatgtcc tcgtcgcgtc gctcgaacgc ctcggcccag cgcgccagcg
     3241 gcacgcgcct tgtgatgagg ctggccagcc acgccgggtc ggcggccgcc agtgccgcgg
     3301 cgcccgcctc gtagtgacgg cggttggcgt tgaccgagcc gaacaccacg tcgttctgca
     3361 gcaccatgct gcgattgaaa ttgccggggt cgaaggcaat cgtccgccca cccgtcgacc
     3421 cgccggtcag gcagacgacg ccgttgccgc ccgcgcggca catcacgtcg atcacgagct
     3481 gcggggcgcc ggtgcattcg atggtgatgt cggcgtcgag gtccttgggc aggtcgcggg
     3541 catgataggt gccgccgagg gcacgcacga gcacaggctt gggcccgctc tccgccaggt
     3601 cgagcacgtg gagctccaga ccgcgctgca ccgccatcag ggcggccagc aggccgaccg
     3661 gtcccgcgcc ggtgatcagc gcgcttttcg gtcgccagct cttggtccgc cgaccgatgc
     3721 gctcgatatg gtcccacgcc ttggcgagca cgctggcagg ttcgagaagc acgcccgacg
     3781 ccccgagagc gggcagcacc ttcacggcat agtcgggttc gagccggatg cgttcggcgc
     3841 cgtagccgtc gaccgccttg atgccgcgtt cggtatagag accgttgcgg cacatgtccc
     3901 attcgcccac
//
LOCUS       DASWGA010000845         5751 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1111465, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000845 DASWGA010000000
VERSION     DASWGA010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5751
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1111465"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1124)
                     /locus_tag="VF991_19655"
     CDS             complement(<1..1124)
                     /locus_tag="VF991_19655"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HEX9558719.1"
                     /translation="MKYRFRDVSGEADADLDATWWRVARALAAPESDPELWAGRFHEA
                     LSGFKFLPAGRVIAGAGTGRSVTLFNCFVMGTIPDDMSGIFENLREAALTMQQGGGIG
                     HDFSTLRPQGAPVKGVGADASGPLSFMDVWDSMCRTIMSAGSRRGAMMATLRCDHPDI
                     EAFVDAKRDPRRLRMFNVSVLVTDAFMKAVKDDADWDLVFGGKVFRTLRARALWERIM
                     RATYDYAEPGVIFIDRVNQRNNLHYCETIQATNPCGEQPLPPYGACLLGSINLAALVK
                     DPFGPGARLDMEALERLVPLAVRMLDNVVDVSRFPLPQQEKEAKAKRRIGLGVTGLAD
                     ALIFCGVRYGSPEAVKLTREWLAAVERLSYLASADIAAEKG"
     gene            complement(1203..1940)
                     /locus_tag="VF991_19660"
     CDS             complement(1203..1940)
                     /locus_tag="VF991_19660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX9558720.1"
                     /translation="MTGFSLWLRSLCFNVGWYAGTVTIALLGAPILLLPRRAVVAWAK
                     FWIRFCLWWLRITVGLTHRLSGLENLPAGPVIIASKHQSSWETLAYTLLFSDAAIVLK
                     RELLFIPVVGWAMARAGNIAVERGDGAAALRGLVRQAKAVIADGRSILIFPEGTRVAV
                     GDERPYQVGTAALYRQLGVPVVPVALNSGLFWGRRQFIKRPGIIDVEMLPAIPPGLSR
                     DAFMTTLRAHIEGATERLIERAQGRNE"
     gene            2012..2698
                     /locus_tag="VF991_19665"
     CDS             2012..2698
                     /locus_tag="VF991_19665"
                     /inference="COORDINATES: protein motif:HMM:NF025094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HEX9558721.1"
                     /translation="MQVTCPNCGARYAVDPLAIGPTGRTVQCARCSHRWFETIKPAPA
                     APSTPPPSVRPAPDFVIRPQPHYSAGLPAIATPRPKIHWRRWATALVMLVFLAGAAGF
                     AYRHEIRSRLPTEWRAILSLEAARGLFASPAKAIPTATPRLEIDLAASKVELVDGRYV
                     VRGELLNSGRAAASTTALRLVFRKGDDVLGERVYSLVEGPIAPGGRLSFSRPLDDPPD
                     GTTNIVPIVE"
     gene            2710..3249
                     /gene="hpt"
                     /locus_tag="VF991_19670"
     CDS             2710..3249
                     /gene="hpt"
                     /locus_tag="VF991_19670"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HEX9558722.1"
                     /translation="MPDRPTVSIRFSAAQIAGRVDVMAAELAAKLPADTLVVSVLKGS
                     FVFAADLIRALSRAGADWSMDFLTLSSYGTGTETTGRVRVVRDIVDDVRDREVLLVDD
                     ILESGFTLSFAKNLLIERGARHVSVCTLLDKPGKRRAKLEADFVGFQCGDEFLVGYGL
                     DWAHRFRGLPYIGVVEKTS"
     gene            complement(3366..>5751)
                     /locus_tag="VF991_19675"
     CDS             complement(3366..>5751)
                     /locus_tag="VF991_19675"
                     /inference="COORDINATES: protein motif:HMM:NF025152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR02302 family protein"
                     /protein_id="HEX9558723.1"
                     /translation="LHTGLLAVLALALGTLGWWRLRDFAWPAREAAVRRLERDSGVPH
                     RPLVAVQDRLAAGENDSMAAALWEAHRRREAERLAGLSNKPARPGLAVLDTWALRFVP
                     ILALVVAIVSAGGWRSERMAAAFTPAFPPPPPVVANLWIAPPAYTGKPPIYLDMAEHD
                     KLLRVPVGSKLAGFVDDVRGRKPPQLVIDGKGTEFATVGKGKYQVEQLITEGKQITLQ
                     ARGDEQARWKLHVIPDLAPTIEFAKPIGVDKWSTKIEYIAGDDFGVTGVQLQVRLHGS
                     VLGDDMFGDDEEPEVLRVDLPVAGNAKKVADTFVRDLTSHPWAGLKVTVMLFASDALG
                     QKGRSSVETFLLPERVFNDPTARALIVLRKALTRNPKGLRLDVADGMRLVQVKPESYR
                     NDPVVQLGLRVGASRLAQNGDKPTITDTQKLLWDLAMRLESGSMSDAERALEQARQEL
                     RDAMQRQAGDEEIERLIQQLYDAMARWQKELADRMQDPEERRRMMEQAEKMDPNNTIT
                     GDDLQKMLDKIREMAKNGQREEAKRLLEELRKMMENATPMMAGPNQQRQPGQRGQQGQ
                     GNQQGREMMNQLDRLSRRQNQLLGESEREGRQQQGRQGQQGQRGQQGQQGQQGQQGQG
                     QQPGDGQWGEQQRGQQEGLRRQLGEFMNRLDEHGMPMPESLGRAERSMREAEDALRRG
                     DPRDASRSQRRALDNLQQGMGDLAEQMRNRGPGNGQDLAEIEERERRSEDRDPLGRSD
                     GNYGDAVDTGVDKVPLELERQRSREILDELRRRAGEQQRPKEELDYIDRLLKTY"
BASE COUNT          873 a         2001 c         1918 g          959 t
ORIGIN      
        1 cccttctcgg cggcgatgtc ggctgacgcc aggtacgaca ggcgctcgac cgcggccagc
       61 cactcgcgcg tgagcttcac cgcctcgggc gagccgtagc gcacgccgca gaagatcaag
      121 gcgtcggcca gcccggtgac gccaagcccg atgcggcgtt tggccttggc ttccttctcc
      181 tgttgcggca gcgggaagcg cgagacatcg accacgttgt cgagcatgcg cacggccagc
      241 ggcaccagcc gctccaatgc ctccatgtcg agacgcgcgc ccggcccgaa cggatccttc
      301 accaacgcgg caaggttgat cgagcccagc aggcaagcgc catacggcgg caacggttgc
      361 tcaccacacg ggttcgtggc ctggatggtt tcgcaatagt gaaggttgtt ccgctgattg
      421 acccggtcga tgaagatcac gccgggctcg gcatagtcgt aggtcgcgcg catgatgcgt
      481 tcccacagcg cgcgcgccct cagcgtgcgg aagaccttgc cgccgaacac gaggtcccag
      541 tcggcgtcgt ccttcaccgc tttcatgaaa gcgtcggtga ccagcaccga gacgttgaac
      601 atgcgcagcc gcctgggatc gcgcttggcg tcgacgaagg cctcgatgtc gggatgatcg
      661 cagcgcaggg tcgccatcat ggcgccgcgg cgcgagcccg cgctcatgat ggtgcggcac
      721 atcgaatccc acacgtccat gaaggagagc ggtcccgaag cgtcggcgcc gacgcctttc
      781 accggcgcgc cttgcgggcg cagggtggag aagtcgtggc cgatgccgcc gccttgctgc
      841 atggtgagcg ctgcttcgcg caaattctcg aagatgcccg acatgtcgtc ggggatcgtg
      901 cccatgacga agcaattgaa gagggtgacg ctgcggccgg tgccggcgcc ggcgatcacc
      961 cggccggccg gcaggaactt gaaaccggaa agcgcctcat ggaagcggcc ggcccacagt
     1021 tcggggtcgc tttccggcgc cgccaaggcc cgcgccaccc gccaccacgt ggcatcgagg
     1081 tcggcgtcgg cctcccccga aacgtcgcga aagcggtatt tcatgtccca gatccgctgg
     1141 gaaaccgaag cccattccat tgtcaaaacg taggcttgga ccccctagat atcaacagtt
     1201 ctttattcgt tcctgccctg agcacgctcg atcaaccgct ccgtcgcccc ctcgatgtgc
     1261 gcgcgcaggg tcgtcatgaa agcatcgcgg ctgaggcccg gcgggatggc gggcagcatc
     1321 tcgacgtcga tgatgcccgg ccgcttgatg aactggcggc gtccccagaa cagaccggaa
     1381 ttgagagcga ccggcacgac cggcacgccg agctgccggt agagcgccgc cgtgcccacc
     1441 tggtacggcc gctcgtcgcc gaccgcgacg cgtgtgccct cggggaagat caggatcgag
     1501 cggccgtcgg cgatgaccgc cttggcctgg cgcaccagac cgcgcaaggc cgcggcgccg
     1561 tcgccgcgtt cgacggcgat gttgccggcg cgggccatcg cccagccgac gacgggaatg
     1621 aacagcaact cgcgcttgag cacgattgcc gcatcggaaa acaacagggt ataggccagc
     1681 gtctcccacg acgactggtg cttggaggcg atgatcaccg ggccggccgg caaattctcc
     1741 aatccactca gccgatgcgt cagcccgacc gttatccgca accaccacag gcaaaagcgg
     1801 atccagaatt tcgcccaggc gaccaccgcg cggcgcggca acagcaggat cggcgcgccg
     1861 aggagcgcga tcgtgacggt gcccgcgtac cagccgacgt tgaagcaaag cgagcgcagc
     1921 cagagggaaa agcctgtcat gcttgtaagc ccagttttag gggcctaatg tccgcccgca
     1981 agcacatcta gtgggcaatc ccccgctcct catgcaagtc acttgtccca attgcggggc
     2041 gcgatacgcc gtcgatccgt tggccatagg tcccaccggg cgcaccgtcc agtgcgcacg
     2101 ctgcagccat cgctggttcg aaacgatcaa gcccgcgccc gcggcgccgt caacgccgcc
     2161 acccagcgtg cggccggcgc ctgatttcgt gattcgcccg cagccgcact acagcgcggg
     2221 actgccggcg attgccacgc cgcgacccaa aatccattgg cgacggtggg cgaccgcctt
     2281 ggtcatgctg gtcttcttgg cgggcgccgc cggcttcgcc taccgccacg agatccgaag
     2341 caggctgccg accgaatggc gggcaatcct gagcctggag gctgcacgcg gcctctttgc
     2401 ctcgcccgcc aaagcgatac caaccgccac accgcggctc gaaatcgacc tcgccgccag
     2461 caaggtcgaa ctcgtcgacg gccgctacgt cgtgcgcggc gagcttctca attcgggccg
     2521 cgcggcggcc tcgaccacgg cgctcagact ggtcttccgc aagggcgacg acgtgttggg
     2581 cgaacgcgtc tattccctgg tcgaagggcc gatcgcaccg ggcgggcggt tgagcttcag
     2641 ccggccgctc gacgatccgc ccgacggcac gaccaacatc gtaccgatcg tggaatgatg
     2701 agtttgtcca tgcccgaccg tcccaccgtc tcgatccgct tctccgccgc ccagatcgcc
     2761 ggccgcgtcg acgtcatggc ggcggagctc gccgccaagc tgccggccga cacgctggtg
     2821 gtgtcggtgc tcaagggcag cttcgtgttc gccgccgacc tgatccgtgc gctgagccgc
     2881 gccggcgccg actggtcgat ggatttcctg accctgtcga gctacggcac gggcacggag
     2941 accaccggcc gggtgcgcgt ggtgcgcgac atcgtcgacg atgtgcgcga ccgcgaggtc
     3001 ctgctggtcg acgacatcct ggaatcggga tttacgctga gcttcgccaa gaacctcctg
     3061 atcgagcgcg gcgcgcgcca tgtctcggtc tgcacgctgc tcgacaagcc cggcaagcgg
     3121 cgcgccaagc tcgaggccga tttcgtcggc ttccaatgcg gcgacgagtt tctcgtcggc
     3181 tacgggctcg actgggcgca ccggtttcgc gggctgcctt atatcggggt ggtggagaag
     3241 acgagctagg cagacggaat tttgtcatcg cgcgcggggt aacccccgcg ctgaagcgaa
     3301 gcgaaggatc tcatgccggt tgcaagcggc gatgaggtcc ttcgcttcgc tcaggacgac
     3361 agaaactagt acgtcttcag caggcggtcg atgtaatcga gctcttcctt cggccgctgc
     3421 tgttcgccgg cgcggcggcg cagctcgtcg aggatctcgc ggctgcgctg gcgctccagt
     3481 tcgagcggca ccttgtcgac cccggtgtcg accgcgtcgc cgtagttgcc gtcggaccgg
     3541 ccgagcggat cgcggtcctc gctgcgccgc tcgcgctcct cgatctcggc gaggtcctgg
     3601 ccgttgcccg gcccgcggtt gcgcatctgc tcggcgaggt cgcccatgcc ctgctgcagg
     3661 ttgtcgagcg cgcggcgctg ggagcgcgag gcgtcgcgcg gatcgccgcg gcgcagcgca
     3721 tcctcggcct cgcgcatcga acgttcggcg cggcccagcg actcgggcat cggcatgccg
     3781 tgctcgtcga gccggttcat gaactcgccg agctgacggc gcaggccttc ctgctggccg
     3841 cgctgctgct cgccccattg gccgtcgccc ggctgctggc cctggccctg ctgcccctgc
     3901 tggccttgct gaccctgctg gccgcgctgt ccctgctgac cctggcggcc ctgctgctgg
     3961 cgcccctcgc gctcggactc gcccagaagc tggttctggc ggcgcgacag gcggtcgagc
     4021 tggttcatca tctcgcggcc ctgctggttg ccctggccct gctggccgcg ctgcccgggc
     4081 tggcgctgct ggttgggccc ggccatcatc ggcgtggcgt tttccatcat cttgcgcagc
     4141 tcttcgagca ggcgcttggc ttcctcgcgc tggccgttct tggccatctc gcggatcttg
     4201 tcgagcatct tctgcaggtc gtcgcccgtg atggtgttgt tgggatccat cttctccgcc
     4261 tgctccatca tgcggcggcg ttcctcggga tcctgcatgc ggtcggccag ctccttctgc
     4321 cagcgcgcca tcgcgtcata gagctgctgg atcaggcgct cgatctcctc gtcgccggcc
     4381 tggcgttgca tggcgtcgcg caattcctgg cgcgcctgct cgagcgcccg ctcggcgtcc
     4441 gacatcgagc cgctctccag gcgcatggcg agatcccaca gcagcttctg ggtgtcggtg
     4501 atggtcggct tgtcgccgtt ctgcgccagt cgcgacgcgc cgacgcgcaa gccgagctgc
     4561 accaccgggt cgttgcggta gctttcgggc ttgacctgga ccaggcgcat gccgtcggcg
     4621 acgtcgaggc gcagcccctt gggattgcgc gtcagggcct tgcgcagcac gatcagcgcc
     4681 cgggccgtcg ggtcgttgaa cacgcgctcg ggcagcagga aggtctcgac cgagctgcgg
     4741 cccttctggc ccagcgcatc ggaggcaaac agcatcaccg tgaccttgag gccggcccac
     4801 ggatggctgg tcaggtcgcg cacgaaagtg tcggcgacct tcttggcgtt gccggcgacc
     4861 ggcaggtcga cgcgcagcac ctcgggctcc tcgtcgtcgc cgaacatgtc gtcgcccagc
     4921 acgctgccgt gcaggcggac ctggagctgg accccggtca cgccgaagtc gtcgccggcg
     4981 atgtactcta tcttggtcga ccacttgtcg acgccgatcg gcttggcgaa ttcgatggtc
     5041 ggcgccaggt cggggatgac gtgcagcttc cagcgcgcct gctcgtcgcc gcgcgcctgc
     5101 agggtgatct gcttgccttc ggtgatgagc tgctcgacct ggtacttgcc cttgccgaca
     5161 gtcgcgaact cggtgccctt gccgtcgatc accagctgcg gcggcttgcg gccacgcacg
     5221 tcgtcgacga agcccgcgag cttgctgccg accggcacgc gcagaagctt gtcgtgttcg
     5281 gccatgtcga gatagatcgg cggcttgccg gtataggccg gcggcgcgat ccacaggttg
     5341 gcgaccaccg gcggcggcgg cggaaaggcc ggcgtgaagg ctgccgccat gcgctcgctg
     5401 cgccagccgc cggcactgac gatggccacg accaaggcaa ggatcggcac gaaccgcagc
     5461 gcccaggtgt cgagaaccgc cagcccggga cgggcgggct tgttgctgag accggccagc
     5521 cgctcggctt cgcggcgacg atgggcctcc cacagggcgg ctgccatcga atcgttctcg
     5581 ccggccgcga ggcgatcctg cacggccacg agaggccggt gcggcacgcc gctgtcgcgc
     5641 tcgaggcggc ggaccgccgc ttcacgcgcg ggccaggcaa aatcccgcag ccgccaccag
     5701 ccgagcgtac ccagggcgag cgccaggacg gccaaaaggc cggtatggag c
//
LOCUS       DASWGA010000846         1678 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_623704, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000846 DASWGA010000000
VERSION     DASWGA010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_623704"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..826)
                     /locus_tag="VF991_19680"
     CDS             complement(<1..826)
                     /locus_tag="VF991_19680"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9558724.1"
                     /translation="MASKVGFIGLGAMGGPMALNLAKAGFALVVHDIDETKTEPLKAR
                     GAEVAASAQSVAASADRTIVIVETTEQAESVIIGAHGIIRGAKPGHIVLCMSTIDPFA
                     ARSIADRLAALGIAMLDAPVSGGTGRAQSGELSVIAGGAAEVFAKCEDLFGAMGSRSF
                     HVGALGSGLAMKLVNNMLVQVNTVAVAEALVLGVKAGLDAQTIYEVVRVSTGASAAWE
                     LRVPRILAGDFAPGGTIDISYKDQELETAFAKRLGVPLLLANVTQQVYQMARAQGLN"
     gene            complement(848..1624)
                     /locus_tag="VF991_19685"
     CDS             complement(848..1624)
                     /locus_tag="VF991_19685"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9558725.1"
                     /translation="MRFKNKVALITAAANGIGRATATIMAREGATVIAVDNHQGRLDE
                     AVPALRQAGGKSGGKVESKLVDALDADQVDKLVADVARDHGRIDILVNAVGGSTVIDK
                     PAATTEQLTLADWQKLIAFNLDATFLCTHAVIPVMKRQRSGKIVNLASIAGRGVSANS
                     SSAYAAAKGGIIAFTRKLAHELGPEGINVNAIAPSVTLTERIRPHWEKRSQASQAEEI
                     ERTPLRRVAEAVDQANVICFLASADADFVTGLTIDVTGGV"
BASE COUNT          234 a          589 c          566 g          289 t
ORIGIN      
        1 tgttcagccc ttgcgcgcgg gccatctggt agacctgctg cgtcacattg gcgagcagca
       61 gcggcacgcc cagccgcttg gcgaaggcgg tctcgagttc ctggtccttg taggaaatgt
      121 cgatcgtccc gcccggcgcg aagtcgccgg cgaggatgcg cggcacgcgc agctcccacg
      181 ccgcactggc gccggtcgag acgcgcacca cctcgtagat cgtctgtgcg tcgagtcctg
      241 ccttgacgcc cagcaccagg gcctccgcca ccgccacggt gttgacctgg accagcatgt
      301 tgttgaccag cttcatggcc aacccgctgc ccagagcgcc gacatggaac gaccggctgc
      361 ccattgcacc gaacaggtcc tcgcacttgg cgaacacctc cgcggcgccg cccgcgatca
      421 ccgagagctc gcccgattgg gcccgcccgg tgccgccgct caccggcgca tcgagcatgg
      481 cgatgccgag cgccgccagg cggtcggcga tgctgcgcgc ggcgaacggg tcgatggtcg
      541 acatgcagag cacgatgtgt ccgggcttgg cgccgcggat gatgccgtgc gcgccgatga
      601 tcaccgattc ggcctgctcg gtggtctcga cgatgacgat ggtgcggtcc gccgacgcgg
      661 ccaccgattg cgccgaggcg gccacctcgg cgcccctggc cttcaacggt tcggtcttgg
      721 tctcgtcgat gtcatgaacc accagggcaa acccggcctt cgccaggttg agcgccatcg
      781 gcccgcccat ggcgcccagc ccgatgaatc cgaccttgct ggccatgctt cctcctcagg
      841 tgagcggcta cacgccgccg gtgacgtcga tggtgaggcc ggtgacgaaa tcggcgtcgg
      901 ccgacgcgag aaagcagatc acgttggcct ggtcgaccgc ttcggcgacg cggcgcaggg
      961 gcgtgcgttc gatctcctcg gcctgcgacg cctgggagcg cttctcccaa tgcggccgga
     1021 tgcgctcggt cagggtgacg ctgggggcga tggcattgac gttgatgccc tcggggccga
     1081 gctcgtgggc gagcttgcgg gtgaaggcga tgatgccgcc cttggccgcg gcataggcgc
     1141 tggaactgtt cgcgctcacg ccgcgccccg cgatcgaggc caggttgacg atcttgccgc
     1201 tgcgctggcg cttcatcacc ggaatgaccg cgtgggtgca gaggaacgtg gcgtcgaggt
     1261 tgaaggcgat cagcttctgc cagtcggcca gggtgagttg ctcggtggtc gccgcgggct
     1321 tgtcgatcac cgtgctgccg ccgacggcgt tgaccaggat gtcgatacga ccatggtcgc
     1381 gcgcgacatc agccaccagc ttgtcgacct gatcggcgtc cagcgcgtcg accagcttgc
     1441 tctccacctt gccgcccgac ttgccgccgg cctggcgcag cgccggcacc gcctcgtcca
     1501 gccggccctg gtggttgtcg acggcgatca ccgtcgcgcc ttcgcgcgcc atgatcgtgg
     1561 cggtggcccg gccgatgccg ttcgccgccg cagtgatcag cgccaccttg ttcttgaagc
     1621 gcatggtcaa gccgcccttc tcacgctgct tgcgcggcct tcaccggctc ccacgact
//
LOCUS       DASWGA010000847         4356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1355580, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000847 DASWGA010000000
VERSION     DASWGA010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4356
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1355580"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..935
                     /locus_tag="VF991_19690"
     CDS             <1..935
                     /locus_tag="VF991_19690"
                     /inference="COORDINATES: protein motif:HMM:NF020036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
                     /protein_id="HEX9558726.1"
                     /translation="AHQYDVANDRAQRSPQIRRILGAGDSDEVSTFESGLAFVHPDDR
                     DRTRLRKQQIIAGAQDRYELEYRIRRPDGQVRWVMDRGQVIREPRHKQATRIVGVLLD
                     ITELKAAEQRQRLLFDELNHRVKNTLSIVQSLAQQTLRTRPDPQAFARAFEDRLQSLA
                     RAHDLLTRDSWQGAPLDEIVAAALAPFLDESRPIRIAGESLMIAASTTITLSLMLHEL
                     ATNAAKYGALSVSDGRMSIRWAVAEAGASLAVDLHWLEENGPAVSPPQHKGFGSRLLA
                     ASALQLSAQFDLDYAPGGLRCRIRFTVPRQRGFL"
     gene            complement(948..2216)
                     /locus_tag="VF991_19695"
     CDS             complement(948..2216)
                     /locus_tag="VF991_19695"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9558727.1"
                     /translation="MRLLIDGARVWDGTGSPPFPGKVLVDGERIVTVATQAEKVEADG
                     AERIDAAGKFLMPGLVEGHAHLSFVDTPRGTALGELPPEDHALLTMDAARKLLGAGFT
                     SACSAAAAKIRLDVAVRDAIAQGMVDGPRLLAASPELTVTSGLGDGRRLHLHQESFGI
                     PVDGPDEVRRMARLCLREGVDTIKLNISGDFGTESALAEATVMTDAEVAAGVDAAHTI
                     GRRVAAHARASASVKRAVKHGVDVIYHCDYADEEALDLLEAAKDRVFTGPAIGLVVAR
                     LDSLRGDNSAQGRIHLERLKPLYEATCRTHDAMRRRGIRIVVGGDYGFAANPQGTNAR
                     DLQHFVTHFGFSPSAALQAATRTGGEIMQRGHELGLVKEGYLADLLLVDGDPLEDVRL
                     LQDNKRFAFVMKGGVRYLPCEGPPHVRRLH"
     gene            2374..3717
                     /locus_tag="VF991_19700"
     CDS             2374..3717
                     /locus_tag="VF991_19700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9558728.1"
                     /translation="MASSKIARRRFVVGTAAASTAFVAAPFVRGAHAAGKLTVGFWDH
                     WVPGANKGSEAITRAWAEKEKVDLQIDYITSQGNKLILTAAAEGQARSGHDILVLGSW
                     DCARYSDQLVPVDDIMGPLTKQNGEASAITQYLGKIEGKWLGVPATPGAQFKGPCSRI
                     DLLKQHAGIDIQAMYPAGGPPKADNWTYDTFLKAAAACHKAGFPFGIGLGTTADSVDT
                     CGAIFQGFDAELVNAKGEITVKSDNVKKALEYWKQLVAYLPTDAPSWDDASNNKMFVA
                     GKTALIMNPPSAWAVARRDRPEVAEQTWHHGMAAGPAGRYGPFTTPFWGIWNFSKNQS
                     AAKSLLAALSQADAIESMVKASAGYDIPPFANMTMLKVWEEEGPPKGTLYHYPNPYNH
                     QILSIAAAPAPHKIAVQIYRQGLQTQMVVRYGIKGEPMDKVLAWAEHELEGYMRS"
BASE COUNT          779 a         1449 c         1414 g          714 t
ORIGIN      
        1 gggctcacca atacgacgtc gccaacgacc gcgcgcagcg ctcgccgcag atccggcgga
       61 ttctgggcgc tggtgattcc gacgaagtat cgaccttcga atccggcctg gccttcgtcc
      121 atcccgacga ccgcgacagg acgaggctgc gcaagcagca aatcatcgcc ggcgcgcaag
      181 atcgctacga gctcgaatac cgcatccggc gacccgatgg ccaggtgcgc tgggtgatgg
      241 accgcggcca ggtcatccgc gagccgcggc acaagcaggc gacaaggatc gtcggcgtgc
      301 tgctcgacat caccgagctc aaggcggccg aacagcgcca gcgcctgttg ttcgacgagc
      361 tcaatcatcg cgtcaagaac acgctgtcga tcgtgcagtc gctcgcccag cagaccttgc
      421 gcacccgccc ggacccgcaa gcgttcgccc gggctttcga agaccggctg cagtcgctgg
      481 cgcgcgccca cgatctcttg acgcgcgact cctggcaggg cgcgccgctc gacgagatcg
      541 tcgccgccgc gctggcgccc ttcctcgacg agagccgccc gatccgcatc gcgggcgagt
      601 cgctgatgat tgcggccagc acgaccatca cgctgagcct gatgctgcac gaactggcga
      661 ccaatgccgc gaagtacggt gccctgtcgg tttcggacgg gcggatgtcc atccgctggg
      721 ccgtggcgga agccggcgca tcgcttgccg tcgacctgca ctggctggaa gagaatggcc
      781 cggcggtgtc gccgccgcag cacaagggct tcggctcgcg cctgctggcg gcgagcgcgc
      841 tgcagctcag cgcccagttc gatctcgact acgcgccggg cggcttgcgc tgccgcattc
      901 gcttcaccgt gccgcgccag cgtggctttc tctagcgatg acaggcttta atgcagccgg
      961 cgcacgtgcg gcgggccttc gcagggcagg taacgcacgc cgcccttcat gacgaaggcg
     1021 aagcgcttgt tgtcctgcag caggcgcaca tcctcgaggg gatcgccgtc gaccagcagc
     1081 agatcggcaa gatagccctc cttcaccagg ccgagctcgt ggccgcgttg catgatctca
     1141 ccgccggtgc gcgtcgccgc ctgcagcgcc gcgctcgggc tgaagccgaa atgagtgacg
     1201 aagtgctgca agtcacgggc attggtgccc tgcggattgg cggcgaagcc gtaatcgccg
     1261 ccgaccacga tgcgaatgcc gcgccggcgc atggcgtcgt gcgtgcggca ggtcgcctcg
     1321 tagagcggct tcagccgctc gagatggatc cggccctggg ccgaattgtc gccgcgcagg
     1381 ctgtccaggc gcgccaccac cagcccgatg gcgggcccgg tgaagacgcg atccttcgcc
     1441 gcctccagga ggtcgagggc ttcctcgtcg gcatagtcgc aatggtagat cacatcgacg
     1501 ccgtgcttga cggcgcgctt caccgaggcc gaagcgcggg catgggcggc aacccggcgg
     1561 ccgatcgtgt gcgcggcgtc gacgccggcg gcgacctcgg catcggtcat gaccgtcgct
     1621 tcggccagcg ccgactcggt gccgaagtcg cccgagatgt tgagcttgat ggtatcgacg
     1681 ccctcgcgca ggcagagccg cgccatgcgg cgcacctcgt cgggcccgtc gacggggatg
     1741 ccgaagctct cctggtgcag gtgcaggcgc cggccgtcgc ccagcccgct ggtgacggtg
     1801 agctcgggac tggcggccag caggcgcggc ccgtcgacca tgccttgggc gatggcatcg
     1861 cgtaccgcga cgtcgaggcg gatcttggcg gccgcggccg agcaggcgct ggtgaagccc
     1921 gcgcccagaa gcttgcgggc ggcgtccatg gtcagcagcg catggtcctc cggcggcagc
     1981 tcgcccagcg ccgtgccgcg cggcgtgtcg acgaaggaga gatgagcgtg gccctcgacc
     2041 aggccaggca tcagaaactt gcccgcggca tcgatgcgct ccgcgccgtc agcctcgacc
     2101 ttctcggcct gggttgccac cgtcacgatc cgctcgccgt cgaccaggac cttgccagga
     2161 aacggcgggc tcccggttcc atcccagacc ctggccccgt ctatcaacag gcgcatcgtt
     2221 tcctccgctt ttggcttgcg gtcatcatag cggttcgacg gttttctgta agtcgaggtg
     2281 cggaattccg ttgcccgaac cggtcgaggc tcctagcgtt ctcgcaaggt cccaagaagg
     2341 accaggcgat cgatcgccac tcgggaggaa aacatggctt catcgaagat tgcgcgtcgt
     2401 cgatttgtcg tcggtaccgc tgcagcatca acagcctttg ttgccgcgcc tttcgtgcgg
     2461 ggcgctcatg ccgcaggcaa gctaacggtc ggcttctggg accattgggt gcctggcgcc
     2521 aacaagggct ccgaggccat caccagggca tgggcggaga aggagaaggt cgacctgcag
     2581 atcgactaca tcacatcgca gggcaacaag ctgatcttga ccgcggccgc cgagggtcag
     2641 gcgcggtcgg gccacgacat cctggtgctc gggagctggg attgtgctcg atactcagat
     2701 cagctcgtgc cagtggacga tatcatgggg ccgctgacca agcagaacgg cgaggccagc
     2761 gcgatcaccc agtatcttgg caaaatcgag ggcaagtggc ttggcgtgcc ggcaacccca
     2821 ggcgcccagt tcaagggccc ctgctcgcgc atcgatctct tgaaacaaca tgccggcatc
     2881 gacatccagg ccatgtatcc ggctggcgga ccgcccaagg ccgacaattg gacctatgac
     2941 accttcctca aggcggctgc tgcctgccac aaggcgggct ttccttttgg tatcgggctc
     3001 ggcacgacag ccgattcggt cgatacctgc ggcgccatct tccagggctt cgatgcggag
     3061 ctggtgaacg ccaagggcga gatcacggtc aagagcgaca acgtcaagaa agcgctcgag
     3121 tactggaagc agctcgtcgc ctatctgccg acggatgcgc catcctggga cgacgccagc
     3181 aacaacaaga tgttcgtcgc cggcaagact gcgctgatca tgaacccgcc cagcgcctgg
     3241 gcagtcgcgc ggcgcgacag gccggaggta gccgagcaga cctggcacca cggcatggcc
     3301 gccggccccg ccggacgtta cggcccgttc acgacaccgt tctgggggat ctggaacttc
     3361 agcaagaacc agagcgccgc aaagagcctg ctggccgcgc tgtctcaggc agatgcgatc
     3421 gagtcgatgg tgaaagccag tgccggctac gacatcccgc cgtttgccaa tatgacgatg
     3481 ctgaaagtgt gggaagagga gggaccaccc aagggcacgc tctatcacta ccccaacccg
     3541 tacaaccacc agatcctgtc gatcgccgcc gcacccgcgc cgcacaagat cgcagtgcag
     3601 atctatcggc aggggcttca gacccagatg gtggtgcgtt acggcatcaa gggcgaaccg
     3661 atggacaagg tgctggcctg ggcggagcac gagctcgagg gctacatgcg cagttaacca
     3721 ggactggtgc tgccggacag gattgaattg cccgacgaca ccggaagttc gagtggcgcg
     3781 aatatcacga cggtccgtca ccagagcccg agcgatccat ccttcgtcgg ttcagctctc
     3841 gccattccca agcgggcacg cacttgtgtg cgtggaggcc gacgccgttt gttgccgctc
     3901 gtctctctac gtccacgtac gccgccgagt cgcgaacgga cgcccacgcc aaacctcgct
     3961 ccaccatcgc ggccgagaga tcagtgtcat cgacgaagca acgagagata ggacccttgt
     4021 ttcgcccgtc ccaatcgacc tgctcacacc tcacggggcg gtctgcgatg agcctccgaa
     4081 gagcctcctt cgcaatcctt ccggcagccc atacgccgtt atcgcaagtc tgtgtcagct
     4141 cgggtgcgtc gatcccgaac agtcgtaccc gctggtcgcc gaacttcagc agatcgccgc
     4201 ctgtgatctt cgggacctgt tgggaagtgg ccgagaacca gatgaggaga accccgaggg
     4261 tggcgaggac gcgcacgtca ggggcgctcc ttatcgagtt tctggaggcg tgagcggatt
     4321 ttcatcaaac tgtctcggca atctcagagc cgctga
//
LOCUS       DASWGA010000848         1568 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2238349, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000848 DASWGA010000000
VERSION     DASWGA010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2238349"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..92)
                     /locus_tag="VF991_19705"
     CDS             complement(<1..92)
                     /locus_tag="VF991_19705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pseudouridine synthase"
                     /protein_id="HEX9558729.1"
                     /translation="MRKPPPLSAADIQARVLYRDGLILVIDKPAG"
     gene            complement(172..>1568)
                     /locus_tag="VF991_19710"
     CDS             complement(172..>1568)
                     /locus_tag="VF991_19710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008141051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9558730.1"
                     /translation="SVLRGHIAAKRVSPVELTEAVLARAEKLQPVLNCFITLVADQAM
                     AAARQAEDAVMQGKPLGLLHGIPFAAKDLVNTAGVRTTFGSLHHDENVPQEDAVSAAR
                     MKAAGAILFGKTTTPEFGHKALTDSPLFGQTRNAWSAEHTSGGSSGGAAVAVAAGIGP
                     IGIATDGGGSTRIPAAANGVVGLKQSNGVIPHSQVADAFGNYTYVTPMTRTVMDTALM
                     LQAMAGPHPSDPWSIGIVPQDYVAAARPEGDLSGKRILYSATLGNKVVAKDVALAFER
                     ALGKLRELGAELVELDGNLPDMEPIWKVINHTTWRARFEDLFRRDDNRLTPSLVRQIA
                     MASEWTGVDYQRAMFRRTDLFRMVQRWFETADYLVTPTLSRTALPIDQDLFEPIRIDG
                     IEVGELRRNWFPYTMPFNITGHPALTVCCGYGSESLPIGLQFVGHFRDEASVLRAAAL
                     YEASEDWLKRWPDL"
BASE COUNT          240 a          529 c          538 g          261 t
ORIGIN      
        1 ccggccggct tgtcgatcac caggatcagc ccgtcgcgat agagaacccg cgcctggata
       61 tctgcggcgc tcagcggcgg cggttttctc atgttcttcc ggaccgcgcg cgtcccgcgc
      121 gctcatgatc ttgagcgggc cagaggcccg cggtccggaa gaccatgagc gctagaggtc
      181 gggccatcgc ttgagccagt cctcgcttgc ctcgtaaagc gccgccgccc gcagcaccga
      241 ggcctcgtcg cggaaatggc cgacgaattg caggccgatc ggcaggctct ccgaaccgta
      301 gccacagcac accgtcagcg ccgggtggcc ggtgatgttg aacggcatgg tgtaggggaa
      361 ccagttgcgc ctgagctcac ccacctcgat gccgtcgatc ctgatcggct cgaacagatc
      421 ctggtcgatc ggcagcgcgg tgcgcgagag cgtcggcgtc accaggtagt cggccgtctc
      481 gaaccagcgc tgcaccatgc ggaagaggtc ggtgcgccgg aacatggcgc gctgatagtc
      541 gacgccggtc cattccgacg ccatcgctat ctggcgcacc agcgaaggcg taagacgatt
      601 gtcgtcgcgc cggaacagat cctcgaagcg tgcccgccac gtcgtgtggt tgatcacctt
      661 ccagatcggc tccatgtcgg gcaggttgcc gtcgagctcg accagctcgg cgccgagctc
      721 gcgcaacttg cccaacgcgc gttcgaacgc gagcgccacg tccttggcca cgaccttgtt
      781 gcccagggtc gcgctgtaga ggattcgctt gcccgaaaga tcgccctcgg ggcgcgccgc
      841 ggcgacataa tcctgcggca cgatgccgat cgaccacgga tcggagggat gcgggccggc
      901 catggcctgc agcatgaggg cggtgtccat caccgtgcgc gtcatcggcg tgacgtaggt
      961 gtagttgccg aaagcgtcgg ccacctggct gtgcgggatc acgccgttgc tttgcttcag
     1021 tccgaccacg ccgttggctg cggcgggaat gcgcgtcgag ccgccgccgt cggtggcgat
     1081 gccgatcggc ccgatgccgg ccgccaccgc gaccgcggcg ccgccgctcg agccgccaga
     1141 cgtgtgctcg gcgctccagg cgttgcgcgt ttggccgaac aacggcgagt cggtcagcgc
     1201 cttgtggccg aactccggcg tcgtggtctt gccgaacagg atggcgccgg ccgccttcat
     1261 gcgcgcggcg gagacggcgt cttcctgggg cacgttctcg tcgtggtgca gcgagccgaa
     1321 cgtcgtgcgc acgcccgcgg tgttcacgag gtccttggcg gcaaagggaa tgccgtgcag
     1381 caggccgagc ggcttgccct gcatgacggc atcctcggcc tgccgggccg ccgccatcgc
     1441 ctggtcggcc acgagggtga tgaagcagtt cagcaccggc tgcagcttct ccgcgcgtgc
     1501 caggacggct tcggtcagct cgaccggaga gactctcttg gcggcaatgt gcccacgcaa
     1561 cacggacg
//
LOCUS       DASWGA010000849         2001 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_222896, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000849 DASWGA010000000
VERSION     DASWGA010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222896"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..546
                     /locus_tag="VF991_19715"
     CDS             <1..546
                     /locus_tag="VF991_19715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9558731.1"
                     /translation="EELDLATGHVAVGNGRLELNEYLQSVSNPLVYAAGDAASMGPPL
                     TPVSGHDGKVVAGNILEGNRHKPDYRGVPSVAFTVPPIASVGLNESQAQQQGLKFKVK
                     SENTPNWFTARRLAERVYGYKTLVEEGTGQILGAHIVGPHADEVINLFALAIRHDLTA
                     RDLQTTMFAYPTGASDIGYMV"
     gene            634..>2001
                     /locus_tag="VF991_19720"
     CDS             634..>2001
                     /locus_tag="VF991_19720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HEX9558732.1"
                     /translation="MLDKTTKDIEPAPGWRFLQFLGFGNNRDTAVEPKAKKPPKEPEE
                     RKHQFATWYIFAAFLGVMLIQSLWLSFTQVETIPYSQFEQLLAENKISEVLVGTETIE
                     GTLKEPFPDGRKLFHTVRVDPGLADKLKEHGVTITGAPSSSFLSTILSWVLPIFIFYL
                     IWTYGIRHMAERQGFGGLMAIGKSRAKVYVETDTKVTFRDVAGVDEAKYELQEVVAFL
                     RDPRSFGRLGARIPKGVLLIGPPGTGKTLLARAVAGEAGVPYFSISGAQFVEMFVGVG
                     AARVRDLFEQARKAAPCIIFIDELDALGRSRMPGAYGGYDEKEQTLNQLLAELDGFDP
                     STGVILLGATNRPEVLDPALLRPGRFDRQVLVDRPDRSGRLEILKVHVAKVRLAPGVD
                     LNQIAGLTTGFTGADLANLVNEAAIVATRRNGDAVTLDDFTAAIERIVAGLEKKSRVL
                     GPAERS"
BASE COUNT          377 a          628 c          644 g          352 t
ORIGIN      
        1 gaggagctgg atttagcgac ggggcacgtc gcggtcggca acggccgcct cgaactgaat
       61 gaatatctcc agagcgtatc caatcctctg gtttatgcag ccggcgacgc cgcaagtatg
      121 gggccgccct taacgcccgt atccggccac gacggtaagg tcgtcgctgg caatattctg
      181 gagggtaacc gtcataaacc agattatcgg ggggtcccga gtgtagcttt cacggtgccg
      241 ccaattgcct ccgtgggttt gaacgagagc caggcgcagc agcaaggatt gaagttcaaa
      301 gtcaagtcgg agaacacgcc aaattggttt accgcccgcc gtctcgcgga gcgggtgtat
      361 ggctataaaa cgttggtcga agagggaacg ggtcagatcc tcggcgcgca tatcgtcggt
      421 ccccacgccg acgaggtaat caatctcttt gcgctcgcaa tccggcatga tctaaccgcg
      481 agggatctgc agacgactat gtttgcttat ccgaccggtg cgtcagacat cggatatatg
      541 gtttagcttt gccggccggc atccagaata tcgagcacgg ggcagcctgc atcctcgata
      601 gttgcccagg ctgcgccagc acaggagacc gacatgctcg acaagacgac caaggacatc
      661 gaaccggcgc ccggttggcg cttcctgcag tttctcggct ttggcaacaa ccgcgacacg
      721 gcggtagagc cgaaagctaa gaagccgccc aaggagccag aggagcgcaa gcaccagttc
      781 gccacctggt acatctttgc ggccttcctt ggcgtgatgc tgatccagtc cctgtggctg
      841 agcttcaccc aggtcgagac cattccgtac agtcagttcg agcagctgct cgcagagaac
      901 aaaatctccg aagtcctggt cggcaccgag accatcgagg gcacactgaa ggagccgttt
      961 cccgacgggc ggaagctgtt ccacacggtc cgtgtcgatc ccgggctggc cgacaagctg
     1021 aaggaacatg gcgtcaccat cacgggcgca ccgtcgagca gtttcctctc aacgatcttg
     1081 tcctgggtac tgccgatctt catcttctac ctgatctgga cttacggcat ccgccacatg
     1141 gcggagcgcc aggggttcgg cggcctgatg gcgatcggaa aatcgcgcgc caaggtctat
     1201 gtcgagaccg acaccaaggt gacgttccgg gacgtcgccg gcgtcgacga ggcgaaatac
     1261 gagctgcagg aggtcgtcgc cttcctgcgc gatccgagat cgttcggccg gctgggcgct
     1321 cgcatcccca agggcgtgct gctgatcggg ccgccgggca ccggaaagac gctgctggcg
     1381 cgcgcggtcg ccggcgaggc gggcgtgccg tatttctcga tctcgggcgc ccagttcgtc
     1441 gagatgttcg tcggcgtcgg cgccgcgcgc gtccgcgacc tgttcgagca ggcgcggaag
     1501 gcggccccct gcatcatctt catcgacgag ctcgacgcac tggggcgaag ccgcatgccc
     1561 ggcgcgtacg gcggctacga cgagaaggag cagacgctca accagctgct cgccgagctc
     1621 gacggcttcg acccgagcac cggcgtgatc ctgctcggcg ccaccaatcg cccggaggtg
     1681 ctcgatccgg ccctgctgcg gcccgggcgg ttcgaccgcc aggtgctggt cgaccggccg
     1741 gaccgctcgg ggcggctgga aatcctcaag gtgcatgtcg ccaaggtgcg gcttgctccg
     1801 ggcgtcgatc tcaaccagat cgccgggctg accaccgggt ttaccggcgc cgacctcgcc
     1861 aatctggtca atgaggccgc catcgtggcg acgcggcgca acggcgacgc ggtcacgctc
     1921 gatgatttca ccgcggcgat cgaacgcatc gtcgcggggc tcgagaagaa gagccgtgtc
     1981 ctcggcccgg cggagcgtag c
//
LOCUS       DASWGA010000850         2509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2124686, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000850 DASWGA010000000
VERSION     DASWGA010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2509
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2124686"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1481)
                     /locus_tag="VF991_19725"
     CDS             complement(<1..1481)
                     /locus_tag="VF991_19725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HEX9558733.1"
                     /translation="MLAEPAVLALSLAYVGLLFAVAYFGDRHARAWSASSVAPAVYGL
                     SLAIYCTSWTFYGAVGRAATSGIDFILIYTGPALVVVAGYPMLRKMVRLAKQHNVTSI
                     ADFLASRYGKSRAVGVIATLFATVGVLPYIALQLQAVSSTFRTIAAPTPLPGSMTGVV
                     QTDTSLIVAALMAVFTILFGVRHVQASEQHRGMMLAIAFESVVKLLALLTVGPFVLFV
                     LFSGPADLLAQVESVAAVADRIGREGSPLTWVVTTLLSAMAFLCLPRQFHVAVVEHGH
                     PASLRTARWLFPLYLVLINLFVVPIAAAGLLLLGSQVNPDLYVLQLPLANGESWLSAF
                     VFIGGLSAATSMVIVACMALSGMIGNELVMPYLLRRQGRWGAGAARDMGPLVVFVRRA
                     AVVLILMAGYAYERIISGYLPLASIGLISFCAVANFAPGLVLGLYWRRAHRYGVVAGL
                     AGGFVVWLYALLLPTLRQSAGGGQGAPLQPYLPAPLAALDAVG"
     gene            1590..>2509
                     /locus_tag="VF991_19730"
     CDS             1590..>2509
                     /locus_tag="VF991_19730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9558734.1"
                     /translation="MAAYQYIYVMKGLNKTFPGGKQVLKDIWLSFLPGAKIGVLGLNG
                     AGKSTLLKLMSGHDDNFTGEAWAAEGARVGMLEQEPQLDAKKDVLGNVMEGAGDMARL
                     LARFEEVSNAFSDPDADMDKLIAEQAELQEKIDAGNGWDLQRTVEIAMDALRCPPPEA
                     EVETLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLERHLKEFPGTVVAVT
                     HDRYFLDNVAGWILELDRGAGIPWEGNYTSWLKQKDQRLALEEKASDARRRTLQRELE
                     WMGQSAQARRTKSKARIAAYEQMVAEEKQAT"
BASE COUNT          499 a          847 c          868 g          295 t
ORIGIN      
        1 tgaccaacgg cgtcgagcgc ggcgagcggc gccggcagat acggctgtag cggcgccccc
       61 tggccgccac cggcgctctg gcgcagggtc ggcagcagca gcgcgtagag ccagacgacg
      121 aagccgccgg ccaggcccgc cacgacgccg tagcgatggg cacgccgcca atagaggccc
      181 agcaccaagc caggcgcaaa attggcgacg gcgcagaagc tgatcaggcc gatcgaggcg
      241 agcggcagat accccgagat gatgcgctcg taggcgtagc ccgccatcag gatcagcacg
      301 acggcagcgc ggcgcacgaa caccaccaac gggcccatgt cgcgcgcggc gccggccccc
      361 caacgacctt gccggcgcag caggtagggc atcaccagct cgttgccgat catgccggag
      421 agcgccatgc aggccacgat caccatcgag gtcgccgccg acaggccgcc gatgaagacg
      481 aaggccgaca gccagctctc gccgttggca agcggcagct gcaggacgta gaggtcggga
      541 ttgacctgcg agccgagcag cagcaagccg gccgccgcga tcggcacgac gaacaggttg
      601 atcagcacca ggtagagcgg gaacagccag cgcgccgtcc tgaggctcgc cggatggccg
      661 tgctcgacca ccgcgacgtg gaactggcgc ggcaggcaga gaaaggccat cgccgagagc
      721 agcgtggtga ccacccaggt gagcggcgag ccctcgcggc cgatacggtc ggcgacggcg
      781 gctacgctct cgacctgggc cagcaggtcg gccggtccgc tgaacagcac gaacagcacg
      841 aacggtccga cggtgagcag cgccagcagc ttgaccaccg attcaaaggc gatcgccagc
      901 atcatgccgc gatgctgctc ggaagcctgc acgtggcgca cgccgaacag gatggtgaac
      961 accgccatca gggcggcaac gatcagcgac gtgtcggtct gcaccactcc cgtcatgctg
     1021 cccggcagcg gcgtgggcgc ggcgatcgtg cggaaggtcg acgacaccgc ctggagctgc
     1081 agcgcgatgt agggcagcac gcccaccgtg gcgaacaggg tggcgatgac gccgacagcg
     1141 cggctcttgc catagcgcga ggcgagaaaa tcggcgatcg aggtgacgtt gtgctgcttg
     1201 gccagccgca ccatcttgcg cagcatcggg tagcccgcga ccaccaccag ggcaggcccg
     1261 gtatagatca ggatgaagtc gatgccgctg gtggcggcgc ggccgaccgc gccgtagaag
     1321 gtccacgacg tgcagtagat ggcaagcgac aggccgtaga cggccggcgc caccgagctt
     1381 gccgaccagg cccgcgcatg ccggtcgccg aaataggcga cggcgaacag caggccgaca
     1441 taggccagcg acagggcgag gacggctggt tccgccagca tgcgtaaagc gtttctcccg
     1501 ttgtcattga acccgttcga cggggccgct acaagcgcgc cgacccagat ccaacccgga
     1561 tccaacccag atcccaggcg gagccaccga tggccgcgta ccagtacatc tacgtcatga
     1621 agggcctgaa caagaccttc ccgggcggca agcaggtcct gaaggacatc tggctgtcct
     1681 tcctgccggg cgccaaaatc ggcgtgctcg gcctgaacgg cgccggaaaa tcgaccctgc
     1741 tcaagctcat gtccggccac gacgacaatt tcaccggcga ggcctgggcg gccgagggcg
     1801 cccgggtcgg catgctggag caggagcccc agctcgacgc caagaaagac gttttgggca
     1861 acgtcatgga aggcgccggc gacatggcgc gtctgctggc gcgcttcgag gaggtgtcga
     1921 acgccttctc cgaccccgac gccgacatgg acaagctgat cgccgagcag gccgagctgc
     1981 aggagaagat cgacgccggc aacggctggg acctccagcg cacggtcgag atcgccatgg
     2041 acgcgttgcg ctgcccgccg cccgaggccg aggtcgagac actgtcgggc ggcgagcgcc
     2101 gccgcgtggc gctctgccgg ctgctcttga gcaagcccga catgctgctg ctcgacgagc
     2161 cgaccaacca tctcgacgcc gaatcggtgg cctggctgga gcgccatctc aaggaattcc
     2221 ccggcaccgt ggtggccgtc acccacgacc gctacttcct cgacaacgtg gccggctgga
     2281 tcctcgagct cgaccgcggc gccggcatcc cgtgggaggg caactacacc tcgtggctga
     2341 agcagaagga ccagcggctg gcgctcgagg aaaaagcgtc ggatgcgcgc cgccgcaccc
     2401 tgcagcgcga actggaatgg atgggccaga gcgcccaggc gcggcgcacc aagagcaagg
     2461 cgcgcatcgc ggcctacgag cagatggtgg ccgaggagaa gcaggcgac
//
LOCUS       DASWGA010000851         2192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2124715, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000851 DASWGA010000000
VERSION     DASWGA010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2124715"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..1334)
                     /locus_tag="VF991_19735"
     CDS             complement(87..1334)
                     /locus_tag="VF991_19735"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558735.1"
                     /translation="MTPHTRRIVAAGAIGNVLGWYDFAIYGYFAASIGRTFFPQTDHV
                     AQVLAAFGVFAIGYLMRPLGGAVTGYIGDRFGRPTALTVSVVAMAVPTFLVGALPGYQ
                     TLGIAAPILLTLLRMIQGLSVGGECTTSFTFMIEYAAPGRRGLSGAVASAGDTLGILL
                     GSATGAVLSAAMSTADLDSWGWRVPFLLGLVVGGAGFLLRRNISDDAPSACSGSPIAE
                     VLRHHGGLLARLAGLAAFGAVGFYLMFLYIVSWLQFIDGVSPAQALGINTASMVAMIP
                     VGLSAGWLSDRVGRKPVLLGAMALACASAVPLLWLMHHANPVLILAGQMGFVLTISTA
                     LAVQPAFMVEATPREVRCTAIAVGYNLTFGVMGGLTPLAATWLVHRTELDLSPAFMVM
                     ATAAISFATVLLFKERQRSVAVV"
     gene            1481..>2192
                     /locus_tag="VF991_19740"
     CDS             1481..>2192
                     /locus_tag="VF991_19740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9558736.1"
                     /translation="MASPLFDLTGKVAVVTGSSKGIGKSIALHLALQGARVVVSSRKQ
                     PACEEAAAEIRKAGGEAIVIPCNISDKSQCQNLIAETKKQLGPVDVLVCNAATNPYYG
                     PTEKMPDEAFTKIMQNNILSNIWLINLCLPDMRARKDGSVIIVSSIGGVRGTAVLGAY
                     GISKAADIALSRNLAVELGPDNIRVNTIAPGLVRTDFARALWENPEYLDKRLQTAPLR
                     RIGEPDDIGGIAVMLAGKA"
BASE COUNT          407 a          733 c          746 g          306 t
ORIGIN      
        1 cgccttggct gatctgctcg tcgtttgcgg ctgcatcgct cggtcctctg ctatggcgat
       61 acgctatcac gcgctgcaga gacgggctag acgacggcga ccgaacgctg cctctctttg
      121 aacagcagca ccgtcgcgaa cgagatcgcc gcagtcgcca tgaccatgaa ggccgggctt
      181 aggtcgagct ccgtgcggtg gaccagccag gtcgcggcga gcggggtcag cccgcccatc
      241 acgccgaagg tgaggttgta gccgaccgcg atcgccgtgc agcggacctc gcgcggcgtc
      301 gcctcgacca tgaaagcggg ctgcacggcg agcgccgtgc tgatggtgag cacgaagccc
      361 atctggccgg ccaggatcag cacgggattg gcgtgatgca tcagccacaa cagcggcacg
      421 gcgctggcgc aggcgagcgc catggcgccg agcagcaccg gcttgcggcc gacccggtcg
      481 gagagccagc ccgcgctcag cccgaccggg atcatggcga ccatgctggc ggtgttgatg
      541 ccgagcgcct gcgccggcga cacgccgtcg atgaactgca gccagctcac gatatagagg
      601 aacatcagat agaagccgac ggcaccgaag gccgcgagtc cggccagccg cgccagcagc
      661 ccgccatgat ggcgcagcac ctcggcgatc ggcgagccgc tgcacgccga cggtgcatcg
      721 tccgaaatgt tacgccgcag caggaagccc gcgccgccga ccaccagccc gagcaggaac
      781 ggcacgcgcc agccccagct atcgagatcg gcggtcgaca tcgcggccga gagcacggcg
      841 ccggtcgccg atcccagcag gatgccgagc gtgtcgccgg ccgaggcgac ggcgccgctc
      901 agcccgcggc ggccgggcgc tgcgtactcg atcatgaagg tgaaggatgt cgtgcattcg
      961 ccgccgaccg agaggccctg gatcatgcgc aacagcgtga gcaggattgg cgctgcgatg
     1021 cccagcgtct ggtagcccgg cagggcgccg accaggaagg tcggcacggc catcgccacc
     1081 accgagacgg tgagcgcggt aggccggccg aagcgatcgc cgatatagcc ggtcacggcg
     1141 ccgccgagcg gccgcatcag gtagccgatg gcgaagacgc cgaaggccgc cagcacctgg
     1201 gccacgtgat ccgtctgggg aaagaaggtg cggccgatcg aggcggcgaa gtagccgtag
     1261 atcgcgaaat cgtaccaccc gagcacgttg ccgatggcac cggcggcaac gatgcggcga
     1321 gtgtgaggag tcatcgcgct ccttatcccg cagcacggga ctggcatcaa gtcgggtctg
     1381 cctagagtgc ggcgtgcgca gtggcgccct ccggcctttg cttttcgccg gcttgtgcga
     1441 cacaacaggc actgaaacga ctgcgttcgg aggaaaccgc atggcatcgc cgcttttcga
     1501 cctcaccggc aaggtcgccg tcgtcaccgg ctcgagcaag ggcatcggca agtcgatcgc
     1561 gctgcatctg gccctgcagg gcgccagggt cgtggtgtcg agccgcaaac agccggcctg
     1621 cgaggaagcg gcggccgaga tccgcaaggc tggcggcgag gcgatcgtca ttccctgcaa
     1681 catctcggac aagagccagt gccagaactt gatcgccgag accaagaagc agctcggtcc
     1741 ggtcgacgtg ctggtctgca acgcggcgac caatccctat tacgggccga ccgagaagat
     1801 gccggacgag gccttcacca agatcatgca gaacaacatc ctgtccaaca tctggctgat
     1861 caatttgtgc ctgcccgaca tgcgcgccag aaaggacgga tcggtgatca tcgtgtcgtc
     1921 gatcggcggc gtgcgcggca cggcggtact cggggcttac ggcatctcca aggcggccga
     1981 cattgcgctg tcgcgcaacc tcgcggtcga gctcggtccc gacaatatcc gcgtcaacac
     2041 catcgcgccc ggcctggtca ggaccgactt tgcccgcgcc ttgtgggaga accccgagta
     2101 tctcgacaag cggctgcaga ccgcgcctct gcggcgcatc ggcgagcccg acgatatcgg
     2161 cggcatcgcc gtcatgctgg ccggcaaggc cg
//
LOCUS       DASWGA010000852         2543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_624695, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000852 DASWGA010000000
VERSION     DASWGA010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_624695"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1054)
                     /locus_tag="VF991_19745"
     CDS             complement(<1..1054)
                     /locus_tag="VF991_19745"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558737.1"
                     /translation="MTSRSYWTAVWCGFLVLTIGLGVRQSFGIFLKPVSAELQVGREL
                     FSFGTALSMLLMGAIAPLSGRLCDRFGSAPTIAAGGVLYVLGMIATATMHDGFMLILG
                     NILVGIGLSAATFGPVLGVVLRVAPPAKQALAVGICSAGGSFGQFFIVPLAAVLQNYF
                     GDWRPTMWALTGIAVLIILLSVGLNDSKEIAAAKRASGGRQSAGEALSEAFAQRSYVL
                     LVIGYFVCGFHVAFVGGHLPAYISDKGIGLSLFGISLSPAELGGWAIGMVGLFNIAGA
                     IVWSSMGVRYKRKNLLALLYLLRSLVFLGFIVAPLSAASVLIFAGALGFLWLGTVPLT
                     TSLVSYIFGPVHLTMLN"
     gene            1185..>2543
                     /locus_tag="VF991_19750"
     CDS             1185..>2543
                     /locus_tag="VF991_19750"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9558738.1"
                     /translation="MAVFLLILAESAVAAPRLERERCTFKPPRGDRIECFVLVVPENR
                     EQPEGREVRLKVAVLKAKRTAGAEPLVYLSGGPGDAPLVASSPGADALSEGDWWNETA
                     AIRRRRDVVILSQRGAGGSTPNLDCFDPRTSDPAKARRRAVTEQQEQDILVRCRAGFD
                     KRKIDLSMYTTPALADDVADLARSMSLGKINLYGVSYGTRWGLEVMRRHPGLVRAAVL
                     DGVYPPPVNGEQNEPEIIRRAFEQLYAECTADALCRERHPGLRGSVEGAIEAAEHKPI
                     ELTLQLEDGPQSVRLDGPKLLMVLLHMMREGEPALIPEALAATQRNDLRLLKMFAEDL
                     ESGDGGLLEQNAQQFDGLYNSIECRETWATVDRAARRKMIESSGVYGFNARTSKSPAF
                     CPVWRVPAAPASERQPVQSAIPTLLLSGNFDWLTPPAWGREAARSLSASRHVVFRAQG
                     HGV"
BASE COUNT          461 a          858 c          865 g          359 t
ORIGIN      
        1 cgttcagcat ggtgagatgg accggcccga agatgtagct gaccagcgag gtggtgagcg
       61 gcacggtgcc gagccacagg aagcccagcg cgccggcaaa gatcagcacc gaggcggccg
      121 acaggggcgc cacgatgaag cccaggaaca ccagcgagcg cagcaggtag agcagcgcca
      181 gaaggttctt gcgcttgtag cggacgccca tcgagctcca aacgatggcg cccgcgatgt
      241 tgaacagccc gaccatgccg atcgcccagc cgccgagctc ggccggcgac aggctgatgc
      301 cgaacagcga caggccgatg cccttgtcgg agatgtaggc cggcagatgg ccgccgacga
      361 aggcgacgtg gaagccgcag acgaagtagc cgatcaccag cagcacgtag ctgcgctggg
      421 cgaacgcctc ggacagcgct tcgcccgcgc tctggcggcc gccgctcgcc cgcttggcgg
      481 cggcaatctc cttgctgtcg ttcagcccga ccgacagcag gatgatcagc acggcaatgc
      541 cggtcagcgc ccacatggtc ggccgccagt cgccgaaata gttctgcagc accgccgcca
      601 aaggcacgat gaagaactgg ccgaacgagc cgccggccga gcagatgccg accgccagcg
      661 cctgcttggc cgggggcgcc acccgcagga ccactcccag gacaggcccg aaggtcgccg
      721 ccgacaggcc gatacccacc aggatgttgc ccaggatcag catgaagccg tcatgcatgg
      781 tcgccgtggc gatcatgccc agcacgtaga gcacgccgcc ggcggcgatg gtcggcgccg
      841 agccgaagcg gtcgcacagc cggcccgaga ggggcgcgat ggcgcccatc agcagcatgg
      901 acagcgcggt gccgaaggag aacagctcgc ggccaacctg gagctcggcc gacacgggct
      961 tgaggaagat accgaagctc tggcgtacgc cgagaccaat ggtgaggacg aggaaaccgc
     1021 accaaacggc ggtccagtag gaacgggagg tcatggttgc caacttgcgg tcggctttgg
     1081 ggcctgacaa ggcgtcggcc gctgtccttg catagaatta cttcatgccg tcacaagctc
     1141 tcatgtggca caacacgtcc atggcccgac tgtttcgatg cggcttggca gtattcctgc
     1201 tgattttggc agaaagcgcc gtggccgcgc cgcggctcga gcgcgagcgc tgcactttca
     1261 agccgccgcg cggcgacagg atcgaatgct tcgtcctggt ggtgcctgag aatcgcgagc
     1321 agcccgaggg ccgcgaggtg cggctcaagg tggcggttct caaggccaag cggacggccg
     1381 gcgccgagcc cctggtctat ctctcgggcg gtcccggcga tgcgccgctg gtcgcctcga
     1441 gccccggcgc cgacgccctc tccgaaggcg actggtggaa cgagaccgcc gccatccgcc
     1501 gtcgccgcga cgtcgtcatc ctgagccagc gcggcgccgg cggatcgacg cccaatctcg
     1561 actgcttcga tccgcgcacc agcgaccctg ccaaggcgcg ccgccgggcg gtgaccgaac
     1621 agcaggagca agacatcctg gtgcgctgcc gcgccggctt cgacaaacgc aaaatagatc
     1681 tgtcgatgta caccacgccg gcgcttgctg acgacgtggc cgacctggcg cgttcgatgt
     1741 cgcttgggaa gatcaacctc tatggcgtgt cctacggcac gcgctggggg ctggaggtga
     1801 tgcgccgcca tcccggcctg gtgcgggcgg cggtgctgga cggcgtctat ccgcccccgg
     1861 tcaatggcga gcagaacgag cccgagatca tccgccgtgc cttcgagcag ctctatgccg
     1921 agtgcaccgc cgacgcgctt tgccgcgagc gccatcccgg tctgcgcggc agcgtcgagg
     1981 gcgccatcga agcggccgag cacaagccga tcgaactcac ccttcagctc gaggacggtc
     2041 cgcaatcagt ccggctcgac gggccgaagc tcctgatggt gctgctgcac atgatgcgcg
     2101 agggcgagcc ggccttgatc cccgaggccc tcgccgcgac acagcggaat gacctcaggc
     2161 tgcttaaaat gttcgcagag gatctggaga gcggcgacgg cgggctcttg gaacagaacg
     2221 cccagcagtt cgacgggctt tacaacagca tcgagtgccg cgagacctgg gcgaccgtcg
     2281 atcgagcggc gcgccgcaag atgatcgaaa gcagcggcgt ttacggcttc aatgcccgga
     2341 ccagcaagtc gccggcattc tgcccggtgt ggcgcgtgcc ggccgccccg gcgtccgagc
     2401 gccagccggt gcaatcggcc attccgaccc tgttgttgag cggcaatttc gactggctca
     2461 cgccgccggc gtgggggcgt gaggcggcgc gctccctctc cgcttcgcgc cacgtcgtct
     2521 ttcgcgccca gggccacggc gtg
//
LOCUS       DASWGA010000853         2869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_624844, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000853 DASWGA010000000
VERSION     DASWGA010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_624844"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="VF991_19755"
     CDS             <1..336
                     /locus_tag="VF991_19755"
                     /inference="COORDINATES: protein motif:HMM:NF023780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558739.1"
                     /translation="PEPQAPPDLAARLAETLGRWTGRRWIASVSSDAGKPTLTAQKTA
                     NADSLRSQAEADPTVQAILKTFPGAKLDAVRRKGDQKSLVAGLAGAGEEPPAADEYPA
                     DDDIPESEF"
     gene            336..665
                     /locus_tag="VF991_19760"
     CDS             336..665
                     /locus_tag="VF991_19760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEX9558740.1"
                     /translation="MFDKLKDLGGLMQQAQAMQQKMQELQTTLEGLEIVGSSGAGLVK
                     VTVNGKNETRKVEIDASLFVPADKGVVEDLIVAAANDARTKVEQTVQEQMRGITGGLP
                     LPPGFKL"
     gene            759..1352
                     /gene="recR"
                     /locus_tag="VF991_19765"
     CDS             759..1352
                     /gene="recR"
                     /locus_tag="VF991_19765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019222220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HEX9558741.1"
                     /translation="MNGPEIERLIQLLGRLPGLGPRSARRAALHLLKKRETLMQPLGT
                     ALADAARTIRACSVCGNLDTVDPCSICADPTRDQGLICVVEDVGDLWAMERGRIFSGR
                     YHVLGGSLSALDGIGPDELNIAGLVDRVAASGVREVIVATNATVDGQTTAHYLAERLS
                     QLGVPLTRLAHGVPVGGELDWLDDGTLATAFKARRAL"
     gene            1393..1995
                     /locus_tag="VF991_19770"
     CDS             1393..1995
                     /locus_tag="VF991_19770"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HEX9558742.1"
                     /translation="MSAETLAALAVALGAGWASGLNVYAAVLVLGGAERLGLVSLPHD
                     LQMLASPWVLGVAALLFALNFFADKIPYIDSINDMLHTFIRIPAGALLAYGAAAGLSP
                     EVAIIAGLLGGTLAAGTHIAKTGSRALINTSPEPFSNVAASLAEDVSVLGGLALAIAH
                     PITFLCLLAVFAALLVWLLPKLVRLALTPFRRMARSRQKS"
     gene            2033..2809
                     /locus_tag="VF991_19775"
     CDS             2033..2809
                     /locus_tag="VF991_19775"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016919832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004057 - arginyl-tRNA--protein
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016598 - protein arginylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEX9558743.1"
                     /translation="MLSFVDRHATLISTMFIRQNIQTLRFFRTTPAMRCPYLPHRLET
                     KLVTELSGPDAISQHDTLTDAGFRRSHHFVYKPLCDGCRACVPVRIRVRDFEPSRAQR
                     RILRRNEHVHAVETQPLATGEQYALFSRYVLTRHRDGDMADMDFDDYRAMVEESPVET
                     AIIEFRDDSAEGRLVGACLVDWLSSGVSAVYSFFDPQHPRRGLGTHMILWLADAAARR
                     GLPYVYLGYWIADSSKMAYKRAFRPLEFFGPEGWTELPTA"
BASE COUNT          446 a         1002 c          948 g          473 t
ORIGIN      
        1 cccgagccgc aggcgccgcc cgatctcgcg gcgcgcctcg ccgaaacgct gggccgctgg
       61 accggccggc gctggatcgc ctcggtatcg agcgacgcgg gcaaaccgac gctcacggcc
      121 cagaagacgg ccaacgccga ttcgctgcgc agccaggccg aggctgatcc gacggtgcag
      181 gccatcctta agacatttcc cggcgccaag ctcgatgccg tgcggcgcaa gggcgaccag
      241 aagtccctgg tggcaggcct cgccggcgcg ggcgaggagc cgcccgcggc agatgagtac
      301 cccgccgacg acgacattcc ggaaagcgag ttctgatgtt cgacaaactc aaggatctgg
      361 gcggcctgat gcagcaggcc caggccatgc aacagaagat gcaggagctg cagacgacgc
      421 tcgaaggcct cgagatcgtc ggcagctccg gcgccggcct ggtcaaggtc acggtcaacg
      481 gcaagaacga gacgcgcaag gtcgagatcg acgcctcgct gttcgtgccg gccgacaagg
      541 gcgtggtcga ggacctgatc gtggccgcgg ccaacgatgc gcgcaccaag gtcgagcaga
      601 cggtgcagga gcagatgcgc ggcatcaccg gcggcctgcc cctgccgccg gggttcaagc
      661 tttgactcgg tgtcatcccg agcgcagcga gggacctttc gcagcgccga tcaaaggtcc
      721 ctcgctgcgc tcgcgatgac agttttggtg taccacccat gaacggcccc gagatcgagc
      781 ggctgatcca gttgctgggc cggctgcctg gcctggggcc gcgttcggcc cgccgggcgg
      841 cgctgcatct tttgaagaaa cgcgagaccc tgatgcaacc gctcggcacg gcgctggccg
      901 acgcggcgcg gacgatccgc gcctgctcgg tctgcggcaa cctcgacacg gtcgatccct
      961 gctcgatctg cgccgatccg acgcgcgacc agggcctgat ctgcgtcgtc gaggatgtcg
     1021 gcgatttgtg ggccatggag cgcggcagga tcttctccgg ccgctaccac gtgctgggcg
     1081 gctcgctgtc ggcgctcgac ggcatcggcc cggacgagct caacatcgcc ggcttggtcg
     1141 atcgcgtcgc ggcgagcggc gtgcgcgagg tgatcgtggc gaccaacgcc acggtcgacg
     1201 gccagaccac cgcccactat ctcgccgaac ggctgtccca gcttggcgtg ccgctgaccc
     1261 gcctcgccca cggcgtgccg gtcggcggcg agctcgactg gctcgacgac ggcacgctgg
     1321 cgaccgcgtt caaggcgcgg cgcgcccttt gaccctccca aagcatgagg ggccgagcat
     1381 gagcagccga ccatgagcgc cgagacgctg gccgccctcg ccgtggcgtt gggcgccggc
     1441 tgggcgagcg ggctcaacgt ctacgccgcc gtgctggtgc tgggcggtgc cgagcgcctc
     1501 ggcctggtca gcctgccgca cgacctgcag atgctggcct cgccctgggt cctgggcgtg
     1561 gcggcgctgc tgttcgcact caacttcttt gccgacaaga tcccctatat cgacagcatc
     1621 aacgacatgc tgcacacctt catccgcatc ccggcgggcg ccctgctggc ctatggtgcg
     1681 gcggccgggc tcagccccga agtcgccatc atcgccggcc tgctgggcgg caccctggcg
     1741 gcgggcaccc acatcgccaa gaccggctcg cgggcgctga tcaacacctc gcccgagccg
     1801 ttcagcaacg tcgccgcctc gctcgccgaa gatgtctcgg tgttgggcgg cctggcgctc
     1861 gcgatcgccc atccgatcac atttttgtgc ctgctggcgg tcttcgccgc cctgctggtg
     1921 tggctgttgc cgaaactggt gcggcttgcc ttgacaccgt ttcgccgcat ggctcgcagc
     1981 cgacaaaagt cttgacttgt cgtctcacca tcgaccttgg tcgagaacac gagtgctttc
     2041 cttcgtcgac cggcacgcta cactcatctc aaccatgttc atccgccaga acatccagac
     2101 cctgcggttt tttcgcacga cgccggcgat gcgctgcccc tatctgccgc atcggctgga
     2161 gaccaaactc gtcaccgagc tgagcgggcc ggatgcgatc tcccagcacg acaccctgac
     2221 cgacgcaggc ttcaggcggt cacaccattt cgtctacaag ccgctgtgcg acggctgccg
     2281 cgcctgcgtg ccggtacgca tccgcgtgcg cgacttcgag ccgagccgcg cccagcgccg
     2341 gatcctgcgc cgcaacgagc acgttcacgc ggtcgagacc cagccgcttg ccaccggcga
     2401 gcagtacgcg cttttttcac gctacgtgct gacccgccat cgcgacggcg acatggccga
     2461 catggatttc gacgactatc gggcgatggt cgaggagagc ccggtcgaga ccgcgatcat
     2521 cgagtttcgc gacgactcgg ctgaaggccg gctggtcggc gcctgcctgg tcgactggct
     2581 gtcgagcggc gtttcggcgg tctacagctt cttcgatccg cagcatccgc ggcgcggatt
     2641 gggcacccat atgatcctgt ggctggccga cgccgcggcg cggcgcgggc tgccctatgt
     2701 ctatctgggt tactggatcg ccgattcgag caagatggcc tacaagcgcg ccttccggcc
     2761 gttggagttc ttcggtcccg agggttggac cgagttgcct acagcgtagg cagtcgaggc
     2821 gaggtggagc gacttgacgc accccctgct ccgccgtgac ggttccaag
//
LOCUS       DASWGA010000854         5385 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1112091, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000854 DASWGA010000000
VERSION     DASWGA010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5385
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1112091"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VF991_19780"
     CDS             complement(<1..443)
                     /locus_tag="VF991_19780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEX9558744.1"
                     /translation="MVRRRALLGGLAATAALGLSPSAFAKLFIVERRRVEAFTLANGL
                     DVVVLPSSRAPIVSQTVVYKVGSADEVPGKTGVAHFLEHMMFKGTATVAPTEFSRTVS
                     KNGGRDNAYTSFDSTGYYQTVAPDRLELVMRMEADRMANLRISEK"
     gene            complement(455..1057)
                     /locus_tag="VF991_19785"
     CDS             complement(455..1057)
                     /locus_tag="VF991_19785"
                     /inference="COORDINATES: protein motif:HMM:NF022679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3035 domain-containing protein"
                     /protein_id="HEX9558745.1"
                     /translation="MRRTRLKPATFLVFSATLCSLALGGCSAFENLGGGKKISPDEFK
                     IVSHSPLTMPPNAELRPPRPGEPRPQEVTPADQAKEALSPALAGRTQQRVTGTGGGAA
                     AAPGRTGSEQALVAKAGGGNIDPNIRSRVNQDTRTINDSDKSFIDSLIFWQESAPSGV
                     VLDPSKEQQRLRDAQAAGQPASGNTPTITRRKRGLLEGVF"
     gene            complement(1104..1586)
                     /gene="lspA"
                     /locus_tag="VF991_19790"
     CDS             complement(1104..1586)
                     /gene="lspA"
                     /locus_tag="VF991_19790"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEX9558746.1"
                     /translation="MRPIERQAMVLVIATLVADQASKQLLLGYLVKAGAIVPVIEGFF
                     RLVIVWNRGVSFGLLSGDSALPAWILSAVAVAVCVGLFVWLRRTDRVLTGWGIGLVMG
                     GAIGNVIDRARWGAVFDFADFHISHWHWPAFNIADSAIVVGVALMLIDSLVGEKQRAP
                     "
     gene            complement(1583..4432)
                     /gene="ileS"
                     /locus_tag="VF991_19795"
     CDS             complement(1583..4432)
                     /gene="ileS"
                     /locus_tag="VF991_19795"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEX9558747.1"
                     /translation="MTTDYKSSVFLPKTDFPMRAGLAKKEPELLKRWADMRLFERLRA
                     ESKGRPKFVLHDGPPYANGNLHIGHALNKILKDLVSRTQQMMGKDSHYVPGWDCHGLP
                     IEWKIEEDYRARNQDKDAVPVGEFRRQCRAFADHWIGVQREEFKRLGVDGDWDHYYST
                     MAYDSEAVIVAELGKFLMNGGLYKGSKAVLWSVVEKTALAEAEIEYHDHTSDTVHVRF
                     PVLKSTGGKLDGASILIWTTTPWTIPGNRALAYGPDIAYVLVEVAAAGEGSRAHVGEK
                     MVLAKELVGAVAEAAKFTPKFLGDVAAADFEGLIASHPLRGQGYEFEVRLLPGAFVMA
                     DAGTGFVHIAPGHGADDYELGVANGVEVPDTVAEDGSYYPHVPLFAGRRVYTSQGVRG
                     DANRSVTEALDKAGKLLAAGRIRHSYPHSWRSKAPVIFRNAPQWFIAMDKPIAEIGGT
                     LRQKALEAIDATRFVPRAGYNRLRSMIEQRPDWCVSRQRAWGVPIAVFVDKATGEPLR
                     DPEVMDRVVEAFRQEGADVWFESPPERFLGNKYNAQDYEQVTDILDVWFDSGCTHVFT
                     LEGNPELKWPADLYLEGSDQHRGWFHSSLLESCGTRGRAPYDGVLTHGFTLDEQGRKM
                     SKSLGNITAPQEVCDQYGADILRLWVVGTDYTEDQRIGPEILKHQAEAYRRLRNTLRY
                     LLGSLAGYSAAEKVAYADMPELERWVLHRMAELDAAFRPAVEDFDFHKIATELHNFCA
                     VDLSAFYFDIRKDAIYCDAAKALRRRAARTVMAELFSFLTAWLAPITCFTAEEAWLAR
                     PHDMPDGAQESVHLRLYPEIPPEWLDVALGDKWKTVRALRRVVTGALELERAEKRIGS
                     SLQAAPRVHVAPEYLAAFKGLDLAEISITSGGELVEGKGPAGAFTLPDVAGVAVEPLP
                     AHGNKCARCWQVLEEVGKSAGHPLLCRRCEDAVSS"
     gene            4746..5285
                     /locus_tag="VF991_19800"
     CDS             4746..5285
                     /locus_tag="VF991_19800"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9558748.1"
                     /translation="MSFWTDLRVPTEQELLIGFYDLRGYMRYAETAEPRQLLDIMSGY
                     FTVTGQIIQGAGGRLVKTLGDAGLAAFPAELVDPAVRAFQSLQSQGRDWLAERNYKSH
                     VIVKLHLGPVALGRVGGPGEEIIDVYGKTVNVAASLPSSGLAMTPAVFRSLQPDTRKL
                     FKKHTPPITYIDAADPRPT"
BASE COUNT          879 a         1810 c         1821 g          875 t
ORIGIN      
        1 tccttctcgc tgatgcgcag attggccatg cggtcggcct ccatgcgcat caccagctcg
       61 agccggtcgg gcgccaccgt ctggtagtag ccggtggaat cgaagctcgt ataggcgttg
      121 tcgcgcccgc cgttcttcga cacggtgcgc gagaactcgg tgggcgccac ggtggccgtg
      181 cccttgaaca tcatgtgctc gaggaagtgc gccacgccgg tcttgcccgg cacctcatcg
      241 gcgctgccga ccttgtagac caccgtctgg ctgacgatcg gcgcgcggct cgagggcagc
      301 acgaccacgt ccaggccgtt ggccagggtg aaggcctcga cgcgccgccg ctcgacgatg
      361 aacaacttgg cgaacgccga cggcgagagg ccgagcgcag cggtcgcagc gaggccgccg
      421 agcagagcgc ggcggcggac catcgatggc ggcctcagaa gacgccttcg agcaggccgc
      481 gcttgcgccg cgtgatggtc ggcgtgttgc cgctcgcggg ctgcccggca gcctgggcgt
      541 cacgcagacg ctgctgctcc ttgctgggat cgagcacgac gccactgggc gccgactcct
      601 gccagaagat caggctgtcg atgaacgact tgtcgctgtc gttgatcgtc ctggtgtcct
      661 ggttgacccg gctgcggatg ttggggtcga tgttgccgcc gcccgccttg gcgaccagcg
      721 cctgctccga gccggtgcga ccgggcgccg ccgccgcgcc gccaccggtg ccggtgacgc
      781 gctgctgggt tcggccggcc aacgccggcg acagcgcctc cttggcctga tcggcgggcg
      841 tcacttcctg cggcctgggc tcgcccggcc gcggcggacg cagctcggcg ttgggcggca
      901 tggtgagcgg cgaatgcgag acgatcttga actcgtcggg cgaaatcttc ttgccgccgc
      961 ccaggttctc gaaagcgctg cagccaccga gcgccaggct gcacagcgtg gcgctgaaca
     1021 caagaaaggt tgccggcttc agtctcgtgc gtcgcatcgt ttgtccttcg gggtcccgct
     1081 tctgtccgct gatcatggcc gcatcagggc gcgcgctgtt tctcgccgac gagagaatcg
     1141 atgagcatca gcgcgacgcc aacgacgatc gccgaatcgg cgatgttgaa ggccggccaa
     1201 tgccaatgac ttatatggaa atcggcgaaa tcgaacaccg ctccccaacg ggcacggtcg
     1261 ataacattgc cgatagcgcc gcccatgaca aggccgatgc cccagcctgt gagtacccgg
     1321 tcggttcgtc gcagccacac gaacagcccg acgcagaccg cgaccgccac cgccgagagg
     1381 atccaggcgg gcaaggcgct gtcgccgctc agcaaaccga agctcacgcc gcggttccac
     1441 acgatcacca gccggaagaa gccctcgatc accggcacga tggcgcccgc cttcaccaga
     1501 tagcccagca ggagctgctt ggacgcctgg tcggccacca aggtcgcgat gaccaggacc
     1561 atcgcctggc gctcgatcgg cctcatgaac ttaccgcgtc ttcgcagcgc cgacagagca
     1621 gtggatggcc ggccgacttg ccgacctcct cgaggacctg ccagcagcgc gcgcatttgt
     1681 tgccgtgggc cggcagcggc tcgacggcga caccggccac atccgggaga gtgaacgcac
     1741 cggccgggcc cttgccctcg accagctcgc cacccgaggt gatgctgatc tcggcgaggt
     1801 cgaggccctt gaaggccgcg agatattccg gcgcgacgtg gacgcgcggg gcggcctgca
     1861 ggctcgaccc gatgcgcttc tcggcgcgct cgagctcgag cgcgccggtg acgacgcggc
     1921 gcagcgcccg caccgtcttc catttgtcgc ccaaggcgac atcgagccat tctggcggga
     1981 tctcgggata gagccgcaga tgcacgctct cctgggcgcc gtccggcatg tcgtggggcc
     2041 gcgccagcca ggcctcctcg gcggtgaagc aggtgatggg ggcaagccag gcggtgagga
     2101 aggagaacag ctcggccatc accgtacggg cggcgcgccg gcgcagcgcc ttggccgcat
     2161 cgcagtagat cgcgtccttg cggatgtcga aatagaaggc cgacaggtcg acggcgcaga
     2221 aattgtgcag ctctgtcgcg atcttgtgga agtcgaaatc ctcgaccgcc ggccggaagg
     2281 cggcatcgag ctcggccatc cgatggagca cccagcgctc gagctcgggc atgtcggcat
     2341 aggccacctt ctccgccgcc gaatagccgg cgaggctgcc cagcaggtag cgcagcgtgt
     2401 tgcgcaggcg gcgataggcc tcggcctggt gcttcaggat ctccggcccg atgcgctggt
     2461 cctcggtgta gtcggtgccg accacccaca ggcgcaggat gtcggcgccg tactggtcgc
     2521 acacttcctg cggcgcggtg atgttgccca gcgacttcga catcttgcgg ccctgctcgt
     2581 cgagcgtgaa gccgtgcgtc agcacgccgt catagggcgc gcggccgcgc gtgccgcagc
     2641 tttccagcag cgaggagtgg aaccagccgc gatgctggtc ggagccttcg agatagaggt
     2701 cggccggcca tttcagctcg ggattgccct cgagggtgaa gacgtgggtg cagcccgagt
     2761 cgaaccagac gtcgaggatg tccgtcacct gctcgtaatc ctgggcgttg tacttgttgc
     2821 cgaggaagcg ctcgggtggg ctctcgaacc acacgtcggc accttcctgg cggaacgcct
     2881 cgaccacgcg gtccatcacc tcggggtcgc gcaacggctc gccggtcgcc ttgtcgacga
     2941 acaccgcgat cggcacgccc caggcgcgct ggcgcgacac acaccagtcc ggccgctgct
     3001 cgatcatgct gcgcaggcgg ttgtagccgg cgcgcggcac aaaacgagtc gcgtcgatcg
     3061 cctcgagcgc tttctggcgc aaggtgccgc cgatctcggc gatcggcttg tccatggcga
     3121 tgaaccattg cggcgcgttg cggaagatca ccggcgcctt cgaccgccag gaatgcggat
     3181 agctgtgccg gatgcggccc gctgccaaga gcttgcccgc cttgtcgagc gcctcggtca
     3241 cgctgcggtt ggcgtcgccc ctgacgccct gcgaggtgta gacgcggcgc ccggcgaaca
     3301 gcggcacgtg cggatagtag ctgccatcct cggccacagt gtcgggcact tccacgccgt
     3361 tggcgacgcc cagctcgtag tcgtcggcgc cgtggccggg cgcgatatgc acgaagcccg
     3421 tgccggcatc ggccatcacg aaagcgccgg gcagcaggcg cacctcgaac tcgtagccct
     3481 ggccgcgcag cggatgggac gcgatcagcc cttcgaaatc ggcggcggcg acgtcgccta
     3541 aaaacttggg cgtgaacttg gcggcctcgg cgacggcgcc caccagttcc ttggccagca
     3601 ccatcttctc gccgacatgg gcgcggctgc cctcgcccgc cgcggcgacc tcgaccagca
     3661 cgtaggcgat gtcgggccca taggcgagcg cgcggttgcc cgggatggtc cagggagtcg
     3721 tggtccagat caagatcgac gcgccgtcga gcttgccgcc tgtcgacttc agcacgggga
     3781 agcggacatg gacggtatcg gaggtgtggt cgtgatattc gatctcggcc tcggccagcg
     3841 ccgttttctc gaccacgctc cacagcacgg ccttggagcc cttgtagagc ccgccattca
     3901 tcaggaactt gccgagctcg gccacgatca cggcctcgga gtcgtaggcc atggtcgagt
     3961 agtaatgatc ccagtcgccg tcgacgccga gccgcttgaa ctcctcgcgc tgcacgccga
     4021 tccagtgatc ggcgaaggcg cggcattggc ggcggaactc gccgaccggc acggcatcct
     4081 tgtcctggtt gcgggcgcgg tagtcctcct cgatcttcca ttcgatcggc aggccgtggc
     4141 agtcccagcc cggcacgtag tggctgtcct tgcccatcat ctgctgggtg cggctcacca
     4201 ggtccttcag gatcttgttg agcgcgtggc cgatatggag gttgccgttg gcgtagggcg
     4261 ggccgtcatg cagcacgaat ttcggccggc ccttgctctc ggcgcgcagg cgctcgaaca
     4321 ggcgcatgtc ggcccagcgc ttcagcagct cgggctcctt cttggccagg ccggcgcgca
     4381 tggggaagtc ggtcttgggc aggaagacgc tggatttata atcggttgtc acgagaaact
     4441 cggcgcaaaa ggagcgatgg ccgcccgccg gtcaggcagg cacgagcagg cagaacgacc
     4501 cggccgcggt cagcggaccg gcccgataat tcgctcctgg agggccccgg tagacatagg
     4561 gcgggcaatc tagggacggg ggtgcggggg gtcaaggcgg cccgacttga cgcttgccgg
     4621 gcggcgttcc gataattccg ccattgccgg acatcagggc cggcgatttc ctgcatcact
     4681 ggcggaccgc cttcagggcg aacacaggcc gcttgctcac gaaccaacgg caaggagaga
     4741 caaccatgtc cttttggaca gacctgcgcg tgccgacgga gcaggagctc ctgatcggtt
     4801 tctatgacct gcgcggctat atgcgctacg ccgaaacggc cgaaccgcgg cagctcctcg
     4861 acatcatgtc gggttatttc accgtgacgg ggcagatcat ccagggcgcc ggcggccgcc
     4921 tggtcaagac gctgggcgat gcgggcctcg cggccttccc agccgaactc gtggacccgg
     4981 cggttcgcgc cttccagtcc ctgcagtcgc agggccggga ctggctcgcc gagcgcaact
     5041 acaagagcca cgtcatcgtc aagctgcacc tgggacccgt cgcactcggt cgcgtcggcg
     5101 gccccggcga agagatcatc gacgtctacg gcaagaccgt gaatgtcgcg gccagtctcc
     5161 ccagcagcgg tctcgccatg acgccggcag tgttccgcag cctgcagccc gacacgcgca
     5221 aattgttcaa gaagcatacg ccgccgatca cctatatcga cgcagccgac ccgcgcccga
     5281 cctgaccgac ggagcagacc ccaacgaagc ggcaggagcc tgattgcgag gctcctgcgt
     5341 gggggtgcgg atgccaggct tttcaatggg ttggaaatcc tgggc
//
LOCUS       DASWGA010000855         2181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1356058, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000855 DASWGA010000000
VERSION     DASWGA010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1356058"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..761
                     /locus_tag="VF991_19805"
     CDS             <1..761
                     /locus_tag="VF991_19805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013533320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558749.1"
                     /translation="RQTHHPLGYVEQLYTFADRNRAAAGSGWRIVSISYLGLTRERAR
                     AGTREPGWHSWYRYFPWEDWRDGAPKLLAAAILPRLGQWIDQAADAATKRGRRQRVEG
                     TFDEQAWNEDLVLQRYELLYEAGLVPEAGRPRKPVADPVPGEPMRYDHRRILATGIAR
                     LRAKIKYRPVVFELMPPDFTLGQLQLAVEALAGRRLHKQNFRRLVEQQGLVEETGAMS
                     VGTGGRPAKLYRFRREILLERALAGTKLPLARPA"
     gene            863..1837
                     /gene="nadA"
                     /locus_tag="VF991_19810"
     CDS             863..1837
                     /gene="nadA"
                     /locus_tag="VF991_19810"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEX9558750.1"
                     /translation="MSVSPQAAQLYDKVKSVILPAEWSEFAPDVDAILALKRERNAVI
                     LAHNYQTPEIFHGVADIVGDSLALAREAMKVDAEVIVLAGVHFMAETAKLLNPAKRVL
                     IPDLRAGCSLAASITAEDVRLLRQRWPGVPIVTYVNTSAAVKAESDICCTSGNARKVV
                     ESLGVPKVIMLPDEYLAQNIAAETKVEIVTWAGHCEVHERFSAADVRQLRAGHPGVVV
                     LAHPECPPEVVAEADFAGSTAAMAEYVTREQPARVVLMTECSMSDNIAALNPGIDFVR
                     PCNLCPHMKRITLPKIRRALETLEHEVTIDPAVAVAARRAVERMLAIH"
     gene            1847..>2181
                     /locus_tag="VF991_19815"
     CDS             1847..>2181
                     /locus_tag="VF991_19815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9558751.1"
                     /translation="METIRSELAGAPVIIGGGLAGLMTALRLAPQPVILLAKTPLAQG
                     AASAWAQGGVAAAVGEGDDPALHAADTLAAGDGLSDPAVAARIAAAAPAAVAELQRYG
                     VMFDRDVQGR"
BASE COUNT          349 a          788 c          715 g          329 t
ORIGIN      
        1 agcgccagac ccatcatcca ctgggctatg tcgagcagct ctacaccttc gccgaccgca
       61 accgcgccgc agcaggttcc ggttggcgca tcgtgtcaat ctcctatctc ggactgacgc
      121 gcgagcgcgc ccgggcgggc acgcgcgagc cgggctggca cagttggtat cgctacttcc
      181 cgtgggagga ttggcgcgac ggcgcgccca agctgctggc agcggcgatc ctcccgcgac
      241 tgggccaatg gatcgaccag gcagcggacg cggcaaccaa gcgcgggcgg cgccagcgcg
      301 tcgaggggac cttcgacgag caggcatgga acgaggatct ggtgctgcag cgctacgagc
      361 ttttatacga ggcggggctg gtgccggagg cgggacggcc gcgcaagccc gttgccgatc
      421 cggtccccgg cgaaccgatg cgctacgatc atcgccgcat cctcgccacc ggcatcgccc
      481 gcctgcgcgc caagatcaaa taccggccgg tcgtgttcga gctgatgccg cccgacttca
      541 ccctcggcca gttgcagctc gcggtcgagg cattggccgg gcgccgcctg cacaagcaga
      601 atttccgccg tctggtcgag cagcaggggt tggtcgagga gaccggcgcc atgtccgtcg
      661 gcaccggcgg ccggccggcc aagctctacc gtttccgccg cgagatcctg ctcgagcgcg
      721 ccctggccgg caccaagctc ccgctggctc gccccgcctg acggcacgat cgctagaagt
      781 cacagaacca ccccttgacg gcctcttatg ctcaggtcta gcataaccga ataatgctca
      841 aatagagcat aagaggtgcc ccatgtccgt ctcccctcaa gctgcccagc tctatgacaa
      901 ggtgaagtcg gtgatcctgc cggccgaatg gtcggaattc gcgcccgatg tcgacgccat
      961 cctggcgctg aagcgcgagc gcaacgccgt catcctcgcc cacaactacc agacgcccga
     1021 gatcttccat ggcgtcgccg acatcgtggg cgacagtctc gcccttgctc gcgaggccat
     1081 gaaggtcgac gccgaggtga tcgtgctggc cggcgtgcac ttcatggccg agaccgccaa
     1141 gcttctcaat ccggccaagc gcgtgctgat tcccgatctc agggcgggct gctcgctcgc
     1201 cgcctcgatc acggctgagg acgtgcggct gctgcgccag cgctggcccg gcgtgccgat
     1261 cgtgacctac gtcaacacgt ccgcggcggt gaaggccgag agcgacatct gctgcacctc
     1321 gggcaacgcc cgcaaggtcg tcgaaagcct cggcgtgccg aaggtgatca tgctgcccga
     1381 cgaatacctg gcgcagaaca tcgccgccga gaccaaggtc gagatcgtga cctgggccgg
     1441 ccattgcgag gtccacgagc gcttttccgc cgcggacgtg cgccagcttc gcgccggcca
     1501 tcccggcgta gtcgtgctgg cccatcccga atgcccgccc gaggtggtgg ccgaagccga
     1561 cttcgcaggc tcgaccgcgg cgatggccga gtatgtgacg cgcgagcagc ccgcccgcgt
     1621 cgtgctgatg accgagtgct cgatgagcga caacatcgcc gccctcaatc ccggcatcga
     1681 cttcgtgcgg ccgtgcaatc tctgtccgca catgaagcgc atcaccctcc ccaagatccg
     1741 ccgcgcgctc gagaccctgg agcacgaagt gacgatcgat cccgccgtcg ccgtggccgc
     1801 ccgccgcgcc gtcgagcgca tgctggcgat ccattaggag gacgcgatgg aaacgatccg
     1861 ctcggaattg gccggcgcgc cggtcatcat cggcggcggc ctggccggtc tcatgacggc
     1921 gctgcggctg gcgccgcagc ccgtgatcct gctcgccaag acgccgctcg cccaaggcgc
     1981 cgcctcggcc tgggcgcagg gcggcgtcgc cgccgccgtg ggcgagggcg acgatccggc
     2041 gctgcatgcc gccgacactc tggcggccgg ggacgggctc agcgaccccg ccgtcgctgc
     2101 ccgcatcgcc gcagcggcgc cggccgccgt cgccgagctc cagcgttacg gcgtcatgtt
     2161 cgaccgcgac gtccagggcc g
//
LOCUS       DASWGA010000856         2640 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1998906, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000856 DASWGA010000000
VERSION     DASWGA010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1998906"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..528)
                     /locus_tag="VF991_19820"
     CDS             complement(<1..528)
                     /locus_tag="VF991_19820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006325507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX9558752.1"
                     /translation="MTFESWAAFTAASTVLLIIPGPTVLLVVSYALGQGWRTALPMAV
                     GVALGDFTAMTLSMLGLGALLAASATLFTLLKWVGAAYLIYLGVKLWRAGGALEAAPR
                     TDAVSAGRMLGHAWLVTALNPKSITFFVAFLPAFLDPQADFLTQMLVFETTFVVLAFA
                     NSFTYALVASRARGLV"
     gene            complement(578..1516)
                     /locus_tag="VF991_19825"
     CDS             complement(578..1516)
                     /locus_tag="VF991_19825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9558753.1"
                     /translation="MLDIAAPAPSRRRILGSTTLGAAAGLLTGLAAGVALALPPRAAP
                     VPPQPGRRRFDGKVVVITGATSGIGRAAALAFAAEGGKVAFCGRRTDLGQEVEHAIKA
                     AGGEALYVKADVLVEDEVRAFIDRAVSAYGRLDVAFNNAGITIEKPLHDYSAEEWDRV
                     NNTNLRGVFLAMKYEIPPMLRAGGGAIVVTSSSNAIATQAKRSAYTASKRALVGLVQA
                     AALDYAQQGIRVNTLIPGTTDTPFLRKAAGMENVPDAVWRVGLNQWVKNNVPGLGRLA
                     TAEEVAGLALTLASDDHPFMTGAQIVLDGGKTAKAG"
     gene            1624..2244
                     /locus_tag="VF991_19830"
     CDS             1624..2244
                     /locus_tag="VF991_19830"
                     /inference="COORDINATES: protein motif:HMM:NF024701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9558754.1"
                     /translation="MARAKTAKPYHHGELREALVAAGRKLLEEKGLRGFTLRECARRA
                     AVSHAAPAHHFASIDDLLAEIATRGYHDLAAAMAAEARRSNGDAAARLVGQGVGYMAF
                     AAANPVLFQLMFSREANHFETPALAAAAKSAYHLHREAVEAVIPQASGEVKERMVDFA
                     WAAVHGFITLVLEGQLGEKDSSRALKARGLAALSAMVEAVVRAGGA"
     gene            complement(2241..>2640)
                     /locus_tag="VF991_19835"
     CDS             complement(2241..>2640)
                     /locus_tag="VF991_19835"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006338167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9558755.1"
                     /translation="DREAKGGPITLPDGSQAPRLPGYRRWIWDGAFCGSVGFRWQPGT
                     SALPPYVLGHIGYSVVPWKQRRGYATRALALLLAEARRESLDYVELTTDPDNLPSQKV
                     ITANGGVLVKRFRKEAAYGGADALLFRIAL"
BASE COUNT          436 a          880 c          936 g          388 t
ORIGIN      
        1 gaccaggccg cgcgcccgcg acgccaccag cgcgtaggtg aaggagttgg cgaaggccag
       61 caccacgaat gtcgtctcga acaccagcat ctgggtcagg aagtcggcct ggggatcgag
      121 gaaggccggc aggaaggcca cgaagaaggt gatgctcttg ggattgagcg ccgtgaccag
      181 ccaggcatgg cccagcatgc ggccggccga caccgcatcg gtgcgcggcg ctgcctccaa
      241 ggcgccgccg gcccgccaga gcttgacgcc gagatagatg agataggccg cgccgaccca
      301 cttcagcagg gtgaacaggg tggcggaggc cgcgagcagg gcgcccagcc ccagcatgga
      361 gagcgtcatg gcggtaaaat cgcccagggc cacgccgacc gccataggca gcgccgtccg
      421 ccagccctgg cccagcgcat aggagacgac cagcaggacg gtcggccccg ggatgatcaa
      481 cagcaccgtc gaggcggcgg taaaggcggc ccagctctcg aatgtcatgt gcttcctccg
      541 gcgagcctgg cgataaagcc acaggcgccg gcggaggtca gccggctttt gccgtcttgc
      601 cgccgtcgag cacgatctgc gcaccggtca tgaaggggtg atcgtcggag gcaagcgtga
      661 gcgccagccc ggcgacttcc tcggcggtgg ccagccgccc gaggcccggg acgttgtttt
      721 tcacccattg gttcaggccg acccgccaca cggcatccgg cacgttctcc atgccggccg
      781 ccttgcgcag gaacggcgtg tcggtcgtgc cggggatcag ggtgttcacg cggatgcctt
      841 gctgcgcgta gtcgagcgcc gcggcctgga ccaggccgac cagggcccgc ttgctcgccg
      901 tgtaggccga gcgcttggct tgggtggcga tggcgttgga cgacgaggtg acgacgatgg
      961 cgccgccgcc tgccctcagc atgggcggga tctcgtactt catggcgagg aacacgcccc
     1021 gtaggttggt gttgttgacg cggtcccatt cctcggcgct gtagtcgtgc agcggctttt
     1081 cgatggtgat cccggcattg ttgaaggcga cgtcgagacg gccataggcg ctcaccgcac
     1141 gatcgatgaa ggcacgcacc tcgtcctcga ccaggacgtc ggctttgacg taaagcgcct
     1201 cgccgcccgc cgccttgatc gcgtgctcga cctcctggcc gagatcggtg cggcgaccgc
     1261 aaaaagcaac cttgccgccc tcggctgcga aggccaacgc tgcggcgcgg ccgatcccgg
     1321 aggtggcgcc agtgatgacg acgaccttgc catcgaagcg ccgccgcccc ggctggggcg
     1381 gcaccggtgc ggccctgggt ggcaaggcga gggcgacacc ggcggccaga ccggtgagga
     1441 ggccggctgc agcgccgaga gtagtggagc ccaggatgcg gcggcggctg ggagcggggg
     1501 cggcgatatc gagcatggct aactccaatc ttgtcgtcgt ctagataaaa tacatcgaat
     1561 ctagacaatg acaagtccca tgtgattcct tgacatgaag atggctgcat gggcggatgg
     1621 ttcatggccc gggcaaagac tgcgaagccc tatcaccacg gcgaactgcg cgaggcgctg
     1681 gtcgcggcgg gccgcaagct gttggaagag aagggcttgc gcggcttcac cctgcgcgaa
     1741 tgcgcgcgcc gggccgcggt ctcgcatgcc gcccccgccc accactttgc ctcgatcgac
     1801 gacctgctgg ccgagatcgc cacccgcggc tatcacgacc ttgcggcggc gatggcggct
     1861 gaagcgcgcc gctcgaacgg cgacgccgcg gcgcgcctgg tcggccaggg cgtgggctac
     1921 atggcctttg ccgccgccaa cccggtccta ttccagctca tgttcagccg cgaggccaac
     1981 cacttcgaga cgccggcatt ggctgcggcg gccaagtcgg cctatcacct gcaccgcgaa
     2041 gcggtcgagg cggtcatccc gcaggcctcg ggcgaggtca aggaacgcat ggtcgacttc
     2101 gcctgggccg ccgtgcacgg cttcatcacc ctggtcctcg aaggccagct cggcgagaag
     2161 gattcgtcgc gcgcgctcaa ggcgcgcggg ctggccgcgc tgtcggcgat ggtcgaggcc
     2221 gtcgtgcgcg ccggcggcgc ctaaagcgca atccggaaca gcagggcgtc ggccccgccg
     2281 taggctgcct ccttgcggaa gcgtttcacc agaacgccgc cgttggcggt gatgaccttc
     2341 tgcgagggca ggttgtcggg atcggtggtc agctcgacat agtcgaggct ctcccggcgc
     2401 gcctccgcga gcagcagcgc cagcgcccgc gtggcatagc cgcggcgctg cttccacggc
     2461 acgacgctgt agccgatatg gcccaggaca tacggcggca gggccgaggt gccgggctgc
     2521 cagcgaaagc ccaccgaacc gcagaacgcg ccgtcccaga tccagcgccg atagcccggc
     2581 aggcgcggcg cctgcgatcc gtcgggcagg gtgataggtc cgcccttggc ttcgcggtcg
//
LOCUS       DASWGA010000857         4709 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1494723, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000857 DASWGA010000000
VERSION     DASWGA010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4709
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1494723"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VF991_19840"
     CDS             <1..201
                     /locus_tag="VF991_19840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558756.1"
                     /translation="ERPVGSGGVTSAPAFPAIRVRTASLADYDALVALFDELDELHRQ
                     ARPDFSGPLTGRRARVRRSSSG"
     gene            219..524
                     /locus_tag="VF991_19845"
     CDS             219..524
                     /locus_tag="VF991_19845"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9558757.1"
                     /translation="MLVAESGEGAIGLAVVLTRPPASFAGAVPRKVIELDNLVVRADQ
                     RGRRIGRHLLAAVVDWSRQCGASHIEVAVHAFNQDAKRFYENFGFAPSIDRLVLAAR"
     gene            664..2262
                     /locus_tag="VF991_19850"
     CDS             664..2262
                     /locus_tag="VF991_19850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558758.1"
                     /translation="MARIPTAILAGIALLLALAPLRPAAAQKAGGVLKVYFFDSPASM
                     SIHEESTIAGQGPMMGVFNNLVMYDQSVPQSGMKSVVPDLASAWSWDEAGTELTFKLR
                     RGVKWHDGKPFTARDVKCTWDLLQGKASETLRVNPRKEWYRNLDTVLVKADDEVTFKL
                     KRRQPAFVALLASGFSPVYPCHVPAAEMRRRPIGTGPFKFVEFKPNELIRVARNPNYW
                     KPGRPYLDGIEYTIIKNPSTGMLSFVAGTVDMTSPYFLQVPMLADVKAQAPQATCVLV
                     STNVQRNVMINREAVPFNKPELRRAVAMTLDRPAFIDTLTQGKGTIGGVLLAPPEGIW
                     GMPADLMQKLPGYDPDVAKNRAEARKIMEEAGYGPGNRLKLKVSTRNIAPYRDPAVIL
                     LDQLKKIYIDAELELLETTQWYPKVRRRDYSIGANLTGNGIDDPDQTFYENYACDSES
                     NYDGYCNPKIDELFDQQSMEVDQEKRKKMVWDIERRLAEDVARPVLYHSRSGTCWQPY
                     VKNYVPMINSIYNGLRMEDVWLDK"
     gene            2273..2560
                     /locus_tag="VF991_19855"
     CDS             2273..2560
                     /locus_tag="VF991_19855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558759.1"
                     /translation="MRSKATFLVGLTAFCLGACTSGAANLYRSSNQPRTIEHGQSVTV
                     MNVANETEALPFAEQYCQARDRIAHFNRMEILSYHRVASRSAVFDCVPHSG"
     gene            2572..3984
                     /locus_tag="VF991_19860"
     CDS             2572..3984
                     /locus_tag="VF991_19860"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9558760.1"
                     /translation="MPLKALATILPIAGWSDAQDRAAAVAFTGGTDPVLPTPFRIGVA
                     GAATVAAAGLAAAALWEARTGRRQQVSVDLRQATASLRSGTYMKLGDGELPHRRHAIM
                     GCYPTKDGRWSYLHCNFPNHRAAALGVLGVAEDRDAVARAVATWNAADLEEAIIAAKG
                     AGGMVRTHAEWASHPQAAAIAALPLMEIVRIGDSPPEKLPAGDRPLHGIRVLDLTRVL
                     AGPTGARTLAEHGADVMKITAAHLPNLGYQEWDTGHGKLSTQLDLRAPGEVETLRGLV
                     READVFSQGYRPGTLGGRGLSPAELAALRPGLVYVSLSAFGHTGPWASRRGFDTVVQT
                     VSGMTARQAEIVPGKTAGPQFYPVSAIDYCTGYLMAFGAMVALARRAQEGGSWLVRIS
                     LAQVGKWMVDLGEVPAASLKGVPEEFSEAELLSWSTTSETPSGRLRHLRPVAQMSETP
                     AHWARPSVPLGYHRPVWPQD"
     gene            complement(3975..>4709)
                     /locus_tag="VF991_19865"
     CDS             complement(3975..>4709)
                     /locus_tag="VF991_19865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008142796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEX9558761.1"
                     /translation="VTRAVAILRLLGRNRAPMGVKSIAQALDLVPSTSLHILRALVVE
                     QLVKVDPLTKQYSLGAGMLPLARAVLENSDFTSLVRPRLDELSKRHGVTAIGVEVPNL
                     DHMIVIALSRAQAPMRIHVDVGSRFPALISATGRCLAAFGEHPWSEVEKRFRSLRWHN
                     APSYETWRKEIETVRRQGFSIDRGNYIAGVTIVAVPVLGARGTLSHTIAGVGLGSQLD
                     RAAAIALARDMRTAAAALASQLMPQS"
BASE COUNT          795 a         1578 c         1591 g          745 t
ORIGIN      
        1 gaacgaccgg ttggttctgg gggcgtgacc tcggctccgg cctttcccgc gatccgggtg
       61 cgcacggcga gcctcgccga ctacgacgct ctggtcgcgc tgttcgacga gctcgacgag
      121 ttgcatcgcc aggcgcggcc ggatttttcc ggccctttga cgggccggcg cgcacgcgtg
      181 cgcagatcga gcagtggctg accgcgccgg cgtcgacggt gctggtggcg gaaagcggcg
      241 agggcgcgat cggtcttgcc gtcgtgttga cgcggccgcc cgcttccttc gccggcgccg
      301 tgccgcgcaa ggtgatcgag ctcgacaatc tcgtggtccg cgccgaccag cgcggccggc
      361 gcatcggtcg gcatctgctg gcggccgtcg tcgactggtc gcggcagtgc ggcgccagcc
      421 atatcgaggt ggccgtgcac gccttcaacc aggatgccaa gcgcttctac gagaattttg
      481 gtttcgcccc gtcgatcgac cggctagtgc tggccgcccg ctgaggcgat tgctaggatg
      541 accaaacggg cgcgcatcgc gtcgcccgca tgagccgatc cgtcgcgtcc gcttcagtga
      601 cccggtaagc gtaccaacca gcgtaaagcc tgcctgcacc tgatgacttg aacaggggga
      661 cccatggcgc gcatcccaac ggccattctc gccggcatcg ccctgttgct ggcgctggcg
      721 ccgctccgtc cggcggcggc gcagaaggcg ggcggcgtcc tgaaggtcta cttcttcgac
      781 agcccggcca gcatgtcgat ccacgaggaa tccaccatcg ccggacaggg gccgatgatg
      841 ggggtcttca acaacctcgt gatgtacgac cagagcgtgc cgcaaagcgg catgaagtcg
      901 gtcgttcccg atcttgccag cgcgtggtcg tgggacgagg ccgggaccga actgacgttt
      961 aaattgcgcc gcggcgtcaa atggcacgac ggcaagccgt tcaccgcccg cgacgtcaaa
     1021 tgcacctggg atctgctgca gggcaaggcc agcgagacgc tgcgcgtcaa cccgcgcaag
     1081 gagtggtacc gcaacctcga cacggtgctc gtcaaggccg acgatgaggt gacgttcaag
     1141 ctgaaacgtc ggcagcccgc cttcgtggcg ctgctcgcct cgggcttctc gccggtctat
     1201 ccgtgccacg tgccggccgc cgagatgcgg cgacggccga tcggcaccgg cccgttcaag
     1261 ttcgtcgaat tcaagcccaa tgagctgatc agggtcgccc gcaaccccaa ctactggaag
     1321 ccgggacgcc cctatctcga tggcatcgag tacaccatca tcaagaaccc gtcgaccgga
     1381 atgcttagct tcgtcgccgg caccgtcgac atgacctcgc cctatttcct ccaggtcccg
     1441 atgctcgccg atgtcaaggc tcaggcgccg caggcgacct gcgtcctggt gtcgacgaac
     1501 gtgcagcgca acgtcatgat caatcgcgag gcagtgccgt tcaacaaacc cgaactgcgc
     1561 cgggcggtgg cgatgactct cgatcgcccc gccttcatcg acactctgac ccagggcaag
     1621 ggcacgatcg gcggcgtgct gctcgccccg cccgagggca tctggggcat gccggccgac
     1681 ctgatgcaga agctgccggg ctacgacccc gacgttgcaa agaaccgggc ggaagcgcgc
     1741 aagatcatgg aggaggcggg ctatgggccg ggcaaccggc tgaagctcaa agtgtcgacg
     1801 cgcaacattg cgccctaccg cgacccggcg gtgatcctgc tcgaccagct caagaagatc
     1861 tatatcgacg ccgagctcga actgctcgaa accacccagt ggtatcccaa ggtgaggcgc
     1921 cgcgactatt cgatcggcgc caacctgacc ggcaacggca tcgacgatcc cgaccagacg
     1981 ttttacgaaa actatgcctg cgattcggaa agcaactacg acggctactg caaccccaag
     2041 atcgacgaac tattcgacca gcagtcgatg gaggtcgacc aggaaaagcg caagaagatg
     2101 gtctgggaca ttgaacgccg cttggccgaa gacgtcgcgc gtccggtcct ctatcacagc
     2161 cgctcgggga cctgctggca gccgtacgtg aagaactacg tgccgatgat caacagcatc
     2221 tacaacggac tgcggatgga agacgtctgg ctggacaagt aggggcgttg caatgcgatc
     2281 caaggcgaca ttcctggtgg ggctgacggc cttctgcctc ggcgcgtgca cgtcgggcgc
     2341 ggcgaatctc taccgaagtt caaatcagcc gcggaccatc gaacatgggc agtccgtaac
     2401 cgtgatgaac gtcgcgaacg aaaccgaagc cctgccgttc gccgaacagt attgccaggc
     2461 gcgtgacagg atcgcccatt tcaatcggat ggaaatcctg agctatcacc gcgtcgcgtc
     2521 caggagcgct gtgttcgact gcgtgccaca ctccgggtag agttcgcgac catgccgcta
     2581 aaagccttgg ccaccatcct gccgatcgcg ggatggtccg acgcccaaga tcgcgccgcc
     2641 gccgtcgcct tcaccggcgg caccgacccc gtgctgccga cgccgttccg catcggcgtg
     2701 gccggtgcgg cgaccgtggc cgccgcgggc ctcgccgccg ccgccttgtg ggaagcgcgg
     2761 accgggcggc gtcagcaggt gagcgtcgat ctgcgccagg ccacggcatc gctgcgcagc
     2821 gggacctaca tgaagctcgg cgacggcgag ctgccgcatc ggcgccacgc catcatgggc
     2881 tgctatccca ccaaggacgg gcgctggagc tacctgcact gcaacttccc caaccatcgc
     2941 gcggcggccc tgggcgtgct cggcgtggcg gaggatcgcg acgcggtggc gcgtgcggtt
     3001 gccacgtgga acgccgccga tctcgaggag gcgatcatcg ccgccaaggg cgccggcggc
     3061 atggtgcgca cgcacgccga atgggccagt catccgcagg ctgccgccat cgcggccttg
     3121 ccgctgatgg agatcgttcg catcggcgac agcccgccgg agaagctgcc ggccggcgac
     3181 cgaccgctgc acggcatccg cgtgctcgac ctcacgcgcg tgctggccgg gccgaccggc
     3241 gcgcgcacgc tcgccgagca cggcgccgac gtgatgaaga tcacggccgc gcacctgccc
     3301 aacctcggtt accaggaatg ggacaccggg catggcaagc tctcgaccca gctcgatctg
     3361 cgcgcaccgg gagaggtcga gaccctgcgt ggactggtgc gcgaggcgga tgtgttttcg
     3421 cagggctatc gtcccggcac cctgggcggc cgcggcctgt cgcccgcgga attggccgcg
     3481 ctgcggccgg ggcttgtcta tgtctcgctc tcggcgttcg gccacaccgg cccgtgggcc
     3541 tcgcggcgcg gcttcgacac cgtggtgcag acggtgagcg gcatgaccgc ccgccaggcg
     3601 gagatcgtgc cgggcaagac ggccgggccg caattctatc cggtgtcggc gatcgactat
     3661 tgcaccggct acctgatggc gttcggcgcc atggtggcgc tggcgcgccg cgcgcaggag
     3721 ggcggaagct ggctggtgcg gatctcgctt gcccaggtcg gcaagtggat ggtcgatctc
     3781 ggcgaggtgc cggcggcgtc gctcaagggt gtgccggaag agttcagcga ggccgagctt
     3841 ttaagctggt cgacgaccag cgaaacgccg tccggccggc tgcgccatct ccggcccgtc
     3901 gcgcagatgt cggaaacgcc ggcgcactgg gcgcggcctt ccgttcccct cggctatcat
     3961 cgtccggtgt ggcctcagga ttgaggcatc agctgcgagg ccagcgctgc cgccgccgtc
     4021 cgcatgtcgc gggccagcgc aatcgcggcc gcgcgatcga gctggctgcc gagcccgacg
     4081 ccggcgatgg tgtgcgagag cgtgccgcgc gcgcccaaca ccggcaccgc gacgatggtg
     4141 acgccggcga tgtagttgcc gcgatcgatg ctgaaaccct ggcgccgcac ggtctcgatt
     4201 tccttgcgcc aggtttcgta ggacggcgca ttgtgccaac gcagcgaccg gaaacgcttc
     4261 tcgacctcgc tccacggatg ttcgccgaag gcggcgaggc agcggccggt cgcgctgatc
     4321 agcgccggaa agcggctgcc gacgtcgaca tggatgcgca ttggcgcctg ggcgcgcgac
     4381 agcgcgatca cgatcatgtg gtcgagattg gggacttcta caccgatcgc ggtcacgcca
     4441 tggcgctttg acagctcgtc gagcctgggc cgcaccaggc tcgtgaagtc gctgttctcg
     4501 agcacggcgc gcgcgagcgg cagcatgccg gcgcccaggc tgtactgctt ggtgagcgga
     4561 tcgaccttca ccagctgctc gacgacgagg gcgcgcagga tgtgcaggct cgtgctggga
     4621 acgagatcaa gcgcctgggc gatcgacttg acccccatcg gcgcccggtt gcggccgagc
     4681 aggcgaagga tggcgacggc gcgcgtgac
//
LOCUS       DASWGA010000858         6301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_100941, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000858 DASWGA010000000
VERSION     DASWGA010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6301
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100941"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VF991_19870"
     CDS             complement(<1..186)
                     /locus_tag="VF991_19870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008142796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9558762.1"
                     /translation="MKTEPTGPRVRPVPAVTRAVAILRLLGRNRAPMGVKSIAQALDL
                     VPSTSLHILRALVVEQLV"
     gene            250..1797
                     /locus_tag="VF991_19875"
     CDS             250..1797
                     /locus_tag="VF991_19875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018066298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEX9558763.1"
                     /translation="MTRLTEYASYADAQAHFSADKLWELFDGDRQRLNIAHECIDRHV
                     GQAHPAVIVIHADGDDEVLSFRRIARDSSRFAHYLAAQGVKPGDRVAIMLEPSRAFYM
                     AVFGTMKLGAIAVPLFTLFGPDGVKLRVDDCSPRLIVTNTEKAPLLATTGPRVVVADA
                     DFIASLERFEPHVVADTAADALAIFQYTSGTTRELPEAVKHSHRSIVTLMVAALYGTG
                     LRPGDRYICPSSPAWGHGLWHGTLAPLALGITVGAYAGRFNAERLLKALQDHGFTNLS
                     AAATHYRMMRNSGAAARYRYSLKKLSFTGEPIDSETAAFAEATFGSPPCSMYGTTEIG
                     VILVSYPGAEDFVVKPSSLGKPIPGGRVEVHDGAGRPCSPGVTGELKVWRRNGWIATK
                     DLGRTDEDGYFYHGGRADDVIISAGWTMSAVEIEDAILKHPDVREAAAIGVADPLRGQ
                     VVKAFVVADRSGDEAFVREIQDLVRRRLSQHEYPRLIEFAAELPKTPAGKVNRKILRT
                     REHAHVG"
     gene            1787..2929
                     /locus_tag="VF991_19880"
     CDS             1787..2929
                     /locus_tag="VF991_19880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008142792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9558764.1"
                     /translation="MSAKAMERSFPKITEKGMDELRQRIGVKIGVTAEPWCHEATRDN
                     IRHYAHGIGDDNPLWCVPEYARKTKFGDVIALPSFLFATSRIVSGYVGGLPGIHAMWS
                     GSDWNWHKTVRRNDEVRTEAWLKDLIVHQTKFAGRAVQQIYHVDFFNQKGELVADADS
                     WCFRTERDHAREQGTKYKEVKARPPRRYSEKELADAYRLYAEEKIRGAEKRYWQDVAE
                     GEELPTMLKGPMTVTGFIAYAQGWGGLYIRANKIAWKLVDAHPGLGIANRFGIPDCPE
                     RVHWEEEFAHEVGAPGAYDYGPERASWLTHHLTNWMGDDGFLRSASCKIRRHNPAGDI
                     LFIKGKVKRKYVEDGRHLVEIEQEARNQDDELSVLGSGVVELLSRS"
     gene            2937..4175
                     /locus_tag="VF991_19885"
     CDS             2937..4175
                     /locus_tag="VF991_19885"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9558765.1"
                     /translation="MPATDLSRGALTGLRVVDLSRVLAGPLCTQMLADHGADVVKIEP
                     PSGDETRLLGPPFDDAGDAAYFGAVNRGKQAFGLDLSRPEGRAVLEALLAKADVLIEN
                     FLPGTMERWGLGYEDVLSGRYPRLVYCAISGFGADGPLGGLPGYDAVLQAMCGLMSIN
                     GTPESGAVRVGIPIVDYVTGYNALTGILLALSARRETSKGQKVEVALFDTALSLLVPH
                     AANWLCSGKTPGRLGSAHPNIAPYDKFSAGDGEVFLGIVNDGQFRRFCRQVKREDLLD
                     DPCFASNAARLQHVDALRLEIERTLAGFKVEELCRDLMRNGVPAGAVNTVPQAFAQPH
                     VAHRQMLMEKDGRRAPGIPVKLGRTPGRPGLRPPRFGEHARVVLAEAGFDDDAIGRLF
                     ASGVLAPSIQQQGDHKERKQ"
     gene            4172..5137
                     /locus_tag="VF991_19890"
     CDS             4172..5137
                     /locus_tag="VF991_19890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008142789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558766.1"
                     /translation="MTLKAMACALAVLAGVTAGTAAAETYPAKPVRIIVPYQAGQGTD
                     VAARYFAEHLSKALGQNFYVDNKPGAGGNIGAEAAAHAVADGYTLLMGTNATQTMNEF
                     MYTSTGFDPAKDFAPIILVGMLPMVIAANPSFAANSVEELIAAAKAKPDKVDVALPSN
                     SARLVFELLKDRAGAPLFGIPYKGSGTAMTEVMGGQVQLIIDTVTATRGHVASGKLKA
                     LGITTLKASELLPGVKSVAEQGVAGFEMAGWNAFYAPRGTPQPVVDLLNAEVTKILAQ
                     PEARQRLLGLGFEAAGGTPGSLAKFEQRERSKWAPLIKAAGLKGD"
     gene            5160..6107
                     /locus_tag="VF991_19895"
     CDS             5160..6107
                     /locus_tag="VF991_19895"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9558767.1"
                     /translation="MPRLGYLLPTRERVMEGHPETASLLALAERAEGLGFDSVWVGDS
                     LLARPRHDPLTLLAAVAARTRKVELGTAVLLPALRNPVVLAQQVSTLDRISEGRLILG
                     VGIAPDVPNVRAEFEAAGVPFDKRVGRLVEGLALARALWTGKPVDWPRAAEGRWKVKS
                     GVLGPTPQRPGGPPIWIAGAVAASRERAGKLFDGWFPNTPLATEYAAQWAEVQAAARA
                     AGRDPAALTAAMYLTLAIDDDAGRADARLNAYLERYYGVDPLETRKQQKSFAGPAAGA
                     AAWIKSYADAGAGHLVLRFAGDHDRHLETAARLRRELGW"
     gene            complement(6121..>6301)
                     /locus_tag="VF991_19900"
     CDS             complement(6121..>6301)
                     /locus_tag="VF991_19900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006312247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HEX9558768.1"
                     /translation="HLVGGRFTVADINVAEIVRYAQPAPELFEPVPRVKAWLAACQAR
                     PAFQKMWEARAKEPA"
BASE COUNT         1056 a         2089 c         2164 g          992 t
ORIGIN      
        1 caccagctgc tcgacgacga gggcgcgcag gatgtgcagg ctcgtgctgg gaacgagatc
       61 aagcgcctgg gcgatcgact tgacccccat cggcgcccgg ttgcggccga gcaggcgaag
      121 gatggcgacg gcgcgcgtga ccgcggggac gggacggacg cgggggcctg taggttcggt
      181 tttcatgatt gtatatatac aattaatgaa cctgttgtac aaccacgcgg ctttgctcat
      241 agtgccgcca tgaccaggct gacggagtac gcgagctacg cggatgccca ggcgcatttt
      301 tccgcagaca agctctggga gctcttcgac ggcgaccgcc agcgcctgaa catcgcgcac
      361 gagtgcatcg accgtcatgt cggtcaggcg catccggcgg tgatcgtgat ccacgccgac
      421 ggcgacgacg aggtgttgag cttccggcgg atcgcccgcg actcttcacg cttcgcccat
      481 tacctcgccg cccagggtgt gaagccaggc gatcgtgtcg cgatcatgct cgaaccgtca
      541 cgcgccttct acatggcggt attcggcacc atgaagctcg gcgccatcgc ggttccgctg
      601 ttcacgctgt tcggccccga cggcgtgaag ctcagggtcg acgactgctc gccacgtctg
      661 atcgtgacca acaccgagaa ggcgccactt ctcgcgacga cgggcccccg tgtcgtggtc
      721 gccgacgcgg acttcatcgc gagcctcgag cggttcgagc cgcacgtcgt ggccgacacc
      781 gcggccgatg cgctggcgat cttccaatac acgtccggaa cgacgcgcga gcttcccgaa
      841 gccgtcaagc acagccaccg ctcgatcgtc accctcatgg tggccgccct ctatggcacc
      901 ggcttgcggc ccggcgatcg ctacatctgc ccgtcgtcgc cggcatgggg gcacggcctg
      961 tggcacggca cgctggcgcc gcttgctttg gggatcaccg tcggcgccta tgccggccgg
     1021 ttcaatgccg agcggctgtt gaaagcgctg caggaccacg gcttcaccaa cctctcggcg
     1081 gcggcgaccc actatcggat gatgcgcaat tcgggcgcgg cggcgcgcta ccggtattcg
     1141 ctcaagaaac tgtccttcac cggcgagccg atcgacagcg agacggcggc cttcgccgag
     1201 gcgaccttcg gcagcccgcc ctgtagcatg tacgggacca ccgagatcgg cgtgatcctg
     1261 gtcagctatc cgggcgcgga ggatttcgtc gttaagccga gctcgcttgg caagccgatc
     1321 ccgggcggtc gcgtcgaggt ccatgacggg gcagggcgcc cttgttcgcc tggcgtgacg
     1381 ggcgagctga aagtctggcg gcgcaatggc tggatcgcga ccaaggactt gggacgcacc
     1441 gacgaggacg gctacttcta tcacggcggt cgcgccgacg acgtcatcat ctcggccggc
     1501 tggacgatga gcgccgtcga gatcgaggat gcgatcctga agcatcccga cgtgcgcgaa
     1561 gccgccgcga tcggcgtcgc ggatccactg cgcgggcagg tcgtgaaggc cttcgtcgtt
     1621 gccgatcgtt cgggcgacga ggccttcgtg cgcgagatac aggatctcgt gcgtcggcgc
     1681 ctcagccagc acgagtaccc gcgcctcatc gagttcgccg ccgagctgcc caagacgccg
     1741 gccggcaagg tcaaccgcaa gatcctacgc acgagggaac acgctcatgt cggctaaagc
     1801 catggaacgc agctttccga agatcaccga gaagggcatg gacgagctgc gccagcgcat
     1861 cggtgtgaag atcggcgtga ccgccgagcc gtggtgccac gaggccacgc gcgacaacat
     1921 ccgccactac gcgcacggca tcggcgacga caatccgctg tggtgcgtgc cggaatatgc
     1981 ccgcaagacg aagttcggcg acgtgatcgc gctgccgagc ttcctgttcg ccaccagccg
     2041 catcgtctcg ggctatgtcg gcggcctgcc tggcatccat gccatgtggt cgggctcgga
     2101 ctggaactgg cacaagaccg tgcgtcgcaa cgacgaggtc aggaccgagg cctggctaaa
     2161 agacttgatc gtgcaccaga ccaagtttgc cggccgcgcc gtgcaacaga tctatcacgt
     2221 cgatttcttc aatcagaagg gcgagctggt ggccgatgcc gacagctggt gctttcgcac
     2281 cgagcgcgac catgcccgcg agcagggcac caagtacaag gaggtgaagg cccgcccgcc
     2341 gcgccgctac agcgaaaagg agttggccga cgcctaccgg ctctatgccg aggagaagat
     2401 ccgcggtgca gagaagcgct actggcagga cgtcgccgaa ggcgaggaat tgcccaccat
     2461 gctgaagggc ccgatgacgg tgacgggctt catcgcctat gcccagggct ggggcggcct
     2521 ctatatccgc gccaacaaga tcgcctggaa gctggtcgac gcccatcccg gtttggggat
     2581 cgccaaccgc ttcggcattc ccgactgccc cgagcgcgtg cattgggagg aagagttcgc
     2641 ccacgaagtc ggcgcgcccg gcgcctatga ctacggcccc gagcgcgctt cttggctgac
     2701 gcatcacctc accaactgga tgggcgacga cggtttcctg cgcagcgcga gctgcaagat
     2761 ccgccggcac aatccggcgg gggacatcct gttcatcaag ggcaaggtga agcgcaagta
     2821 cgtcgaggac ggccggcacc tggtcgagat cgagcaggag gcgcgcaacc aggacgacga
     2881 gctgtcggtg ctgggatcgg gcgtggtgga actgctgagc cgctcctgac gcccgcatgc
     2941 ccgcaaccga tctctcgcgc ggcgcgctca ccggccttcg agtcgtcgac ctctcgcgcg
     3001 tgctggccgg gccgctctgc acccagatgc tggcggacca cggcgccgac gtcgtcaaga
     3061 tcgagccgcc gtcgggcgac gagacgcggc tcctcggccc gccgttcgat gacgccggcg
     3121 acgccgccta tttcggcgcg gtcaatcgcg gcaagcaggc cttcggcctc gacctatcgc
     3181 ggccggaagg acgggccgtg ctcgaggcgc tgctggccaa ggccgacgtc ctgatcgaga
     3241 atttccttcc cggcacgatg gagcgctggg gcctcggcta cgaggacgtg ctgtcggggc
     3301 gctatccgcg cctggtgtac tgcgccatct cgggttttgg cgccgatgga ccgttgggcg
     3361 gcctgcccgg ctacgacgcc gtgctgcagg cgatgtgcgg gctgatgagc atcaacggca
     3421 cacccgaatc gggcgccgtg cgcgtcggca ttcccatcgt cgactatgtg accggctaca
     3481 acgcgctcac cggcattctg ctcgccttgt cggcgcgccg cgagaccagc aaaggccaga
     3541 aggtcgaggt cgcgctgttc gataccgcgc tcagccttct cgtcccgcat gccgcgaact
     3601 ggctgtgttc gggcaagacg ccgggccgcc tcggcagcgc ccatcccaat atcgcgccct
     3661 acgacaagtt ctcggccggc gacggcgagg tcttcctcgg catcgtcaat gacgggcagt
     3721 tcaggcgctt ctgccggcag gtcaagcgcg aggacctgct ggacgatccg tgtttcgcaa
     3781 gcaacgccgc acggctgcag catgtcgatg cgctgcggtt ggagatcgaa cgcacgctgg
     3841 ccggcttcaa ggtcgaggaa ctctgccgcg acctgatgcg caacggcgtg ccggcgggcg
     3901 ccgtcaacac cgtaccgcag gcattcgcac aacctcacgt cgcccatcgc cagatgctga
     3961 tggaaaagga cggacggcgc gcgcccggca ttccggtgaa gctcggccgc acgccgggcc
     4021 ggccggggct gcggccgccg cgtttcggcg agcatgcgcg agtggtcctg gccgaggccg
     4081 ggttcgatga cgacgcgatc gggaggctgt tcgcgtcggg cgtcctcgcc ccatcgatcc
     4141 aacaacaagg cgatcacaag gagaggaaac aatgaccctg aaagccatgg cctgcgccct
     4201 ggccgtgctg gccggcgtga cggccggcac ggcggccgcc gagacctatc cggccaagcc
     4261 ggtgcgcatc atcgtgcctt accaggcggg acagggcacc gacgtcgccg cccgttactt
     4321 cgccgagcac ctgtcgaagg cgctggggca gaatttctat gtcgacaaca agcccggcgc
     4381 cggcggcaat atcggcgccg aagcggcggc acatgccgtg gccgacggct acacgctgct
     4441 gatgggaacc aacgccacgc agaccatgaa cgagttcatg tacacgtcga cgggcttcga
     4501 tccggccaag gatttcgccc ccatcatcct ggtcggcatg ctgcccatgg tgatcgcggc
     4561 aaatccgtcg tttgcggcga attcggtgga agagctgatc gcggcagcca aggctaagcc
     4621 cgacaaggtc gatgtcgccc tgcccagcaa cagcgcccgg ctggtcttcg agctcctgaa
     4681 ggaccgcgcc ggcgccccgc tgttcgggat tccctacaag gggtccggca cggcgatgac
     4741 ggaagtgatg ggcggccagg tccagctcat catcgatacg gtgacggcga cccgcggcca
     4801 tgtcgcgtcc ggcaagctga aggcgctcgg catcacgacc ctgaaggcga gcgagctgct
     4861 gcccggcgtg aagtcggtcg ccgagcaggg cgtggcgggc ttcgaaatgg cggggtggaa
     4921 cgccttttat gcgccgcgcg gcacgcccca gcccgtggtc gatctgctga acgccgaagt
     4981 gacgaagatc ctggctcagc ccgaggcgcg gcaacgcctg ctgggactag gcttcgaagc
     5041 cgcgggcggc acgcccggaa gtctggcaaa gttcgagcaa cgggaacgga gcaagtgggc
     5101 gccgctgata aaggcggcgg ggctcaaggg cgactgaacc atcgaaccag ggagaaccga
     5161 tgccgcgatt gggatacctg ttgccgaccc gcgagcgggt catggagggt catcccgaaa
     5221 ccgcgtcgtt gctggccttg gccgagcgcg ccgaggggct gggtttcgat tcggtctggg
     5281 tcggcgattc gctgctggcc cggccgcggc acgatccgct gaccctgctg gccgccgtcg
     5341 cggcgcgcac gcgcaaagtc gaactgggta cggcggtgct gttgccggcc ttgcgtaatc
     5401 ccgtcgtgct cgcccagcag gtctcgacgc tcgatcgcat ttccgagggc cggctgatcc
     5461 tgggcgtcgg catcgccccg gacgtgccga acgtgcgggc cgaattcgag gcggcgggcg
     5521 tgccgttcga caagcgggtc ggccggttgg tcgaaggcct ggcgctggcc cgcgccctgt
     5581 ggaccggcaa gccggtcgat tggccgaggg ctgccgaggg gcgctggaag gtcaaatcag
     5641 gcgtgctcgg accgacgccg cagcggccgg gcgggccgcc gatctggatc gcgggtgccg
     5701 tcgcggcatc gcgcgagcgc gcgggtaagc tgtttgacgg ctggttcccc aacaccccgc
     5761 tggcgaccga gtatgccgcg caatgggcgg aggtgcaggc ggcggcgcgc gccgcggggc
     5821 gcgatccggc cgcgctcacg gcggcgatgt acctgacgct cgcgatcgac gacgacgcgg
     5881 gccgagccga tgcccggctc aacgcctatc tcgagcggta ttacggcgtg gatccgctgg
     5941 agacacgcaa gcagcagaag agtttcgccg gcccggctgc cggcgcggcc gcctggatca
     6001 agtcctatgc cgatgccggc gccggccatc tggtgctgcg cttcgccggc gaccacgacc
     6061 gtcatctcga gaccgcggcg cgcttgcgcc gcgagctggg ctggtagtca tcgctgggcc
     6121 tcaagccggt tccttcgcgc gcgcctccca catcttctgg aaagccggcc gtgcctggca
     6181 ggcggcgagc caggccttca ccctgggcac cggttcgaac agctccggtg ccggctgggc
     6241 gtagcgaacg atctcggcca cgttgatgtc ggccacggta aagcggccgc ccacgagatg
     6301 g
//
LOCUS       DASWGA010000859         2798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1495805, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000859 DASWGA010000000
VERSION     DASWGA010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1495805"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..369
                     /locus_tag="VF991_19905"
     CDS             <1..369
                     /locus_tag="VF991_19905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9558769.1"
                     /translation="LTRTKKFYCEVLGLENGDRPPLGFPGYWLYSGGVATVHLLGPRK
                     PREGIVVRGTKKKFKDTGRFDHIAFAASDLPSVRKRLKSKKVKFREQIVPRTGAAQIF
                     LYDPDGVGVELNFPPEEAKA"
     gene            370..2253
                     /locus_tag="VF991_19910"
     CDS             370..2253
                     /locus_tag="VF991_19910"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HEX9558770.1"
                     /translation="MLLSLAIERIEPLADGAPFGEVGAYERVIGRAKGEVDPRDPANK
                     GIALIDKAPRNGRGKVEYATDIFILRPKDSTRGNGRILYEVNNRGRKMLFGNIADGPQ
                     GVNDPKTAADVGNGFPLRRGYTLVWSGWDPDAPRANMGLALTAPVATDNGQPIVKTVR
                     DEFCSGTRGGALEVFKLSYEANTLEQPRVRLTVRERADDEPHELPLNQWSFVDARSIK
                     LSDGTKPKPGYLYEFHYDAKNPKVLGLGFAATRDVISWLRYDPAAIAATGRPISHALA
                     IGFSQAGRYLRNHISEGFNRDEQGRKVFDGIHSHIAGIGRIFFNTPFGQPARTGTQHE
                     DHDFPENEFPFSTATLADPLTGRKGSLFRGDGSDPKLIETNTSTEYWQKGASLLHTDP
                     LGKQDVTLPDNSRVYMIAGTQHGGRAGATTDPGPNINPRNPHNPMPAVRALLVALDEW
                     VVSGKEPPASRVPTLAAGTLVEPDKTGFPVVPGAVVVKVTNRVTPPGDWVHPKPADKA
                     YRTLVCKVDADGNEAAGVRLPDIAVPLATYSGWNEYKPPYPKGELADRDGSCLPFALD
                     KAARQAAGDPRPSVAERYASGADYLAKVQAAVTALMNDRLLLAEDAERYLERARREPR
                     VAP"
     gene            2266..>2798
                     /locus_tag="VF991_19915"
     CDS             2266..>2798
                     /locus_tag="VF991_19915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9558771.1"
                     /translation="MPKLDRDGVKIHYEIHGSGPTLLLSHGYSSTARMWDGQVAALKD
                     RYQVIVWDMRGHGDSDYPSDAKLYSEALTVGDMKALLDLAGAKKAIVAGLSLGGYMSL
                     AFNASHPDRVRALMLFDTGPGFKKDEARARWNETAHQRAATFDAKGLAALNSSDEVKL
                     TRHRDATGLAGAARGMLA"
BASE COUNT          493 a          993 c          894 g          418 t
ORIGIN      
        1 ctcacgcgca ccaagaagtt ctattgcgag gtgctgggcc tcgaaaatgg cgatcgcccg
       61 ccgctcggct ttcccggcta ctggctctat tcgggcggcg tcgccaccgt gcacctgctg
      121 ggcccgcgca agccgcgcga gggcatcgtc gtgcgcggca cgaaaaagaa gttcaaggat
      181 accggccgct tcgaccacat cgctttcgcc gcgtcggatc tgccaagtgt gcgcaagcgc
      241 ctgaaatcca agaaggtgaa attccgcgag cagatcgtgc cgcgcaccgg cgccgcccag
      301 atcttcctct acgatcccga cggcgtcggc gtggaattga atttccctcc tgaggaagcc
      361 aaggcctaag tgctgctgtc gctcgccatc gaacgcatcg aacccctggc cgacggcgcg
      421 ccgttcggcg aggtcggcgc ctatgagcgc gtgatcggcc gggccaaggg cgaggtcgat
      481 ccgcgcgacc ctgccaacaa gggcatcgcc ctgatcgaca aggcgccgag gaacggccgc
      541 ggcaaggtcg agtacgcgac cgacattttc atcctgcggc ccaaggattc tacgcgcggc
      601 aatgggcgca ttctgtacga agtgaacaat cgcggccgca agatgctgtt cggcaacatc
      661 gccgatggcc cgcagggcgt gaacgatccc aagaccgccg ccgatgtcgg caacggcttt
      721 ccgctgcgac ggggctacac cctcgtctgg tcgggctggg accccgatgc gccgcgcgcc
      781 aatatggggc tggcactgac cgcgccggtc gctaccgaca acggccagcc catcgtcaag
      841 accgtgcgcg acgaattctg ctcgggcacg cgcggcggcg cgctcgaggt cttcaagctc
      901 tcctacgagg ccaacacgct cgagcagccg cgggtgcggc tgacggtgcg cgagcgcgcc
      961 gacgacgagc cgcacgagct gccgctcaac cagtggtcct tcgtcgacgc ccgctcgatc
     1021 aagctcagcg acggcaccaa gcccaagccg ggctatctct atgaattcca ctacgacgcc
     1081 aagaatccca aggtgctggg cctgggcttc gccgccacgc gcgacgtcat aagctggctg
     1141 cgttacgacc cggcggcgat cgccgccacc ggccggccga tcagccatgc gctggccatc
     1201 ggtttctccc aggccggccg ctatctgcgc aaccacatct ccgagggttt caaccgcgac
     1261 gaacagggtc gcaaggtgtt cgatggcatc cattcgcaca tcgccggcat cggccgcatc
     1321 ttcttcaata cgccgttcgg ccaaccggcg cgtaccggca cccagcacga ggatcacgat
     1381 tttccggaga acgagttccc gttctcgacg gcgacgcttg ccgacccgct gaccggcagg
     1441 aagggctcct tgttccgcgg tgacggttcc gatcccaagc tgatcgagac caacacctcg
     1501 accgagtact ggcagaaggg tgcctcgctg ctgcacaccg atccgctcgg caagcaggac
     1561 gtgacgctgc cggacaactc gcgcgtctac atgatcgccg gcacccagca tggcggccgc
     1621 gccggggcca ccaccgatcc cggccccaac atcaacccgc gcaacccgca caatcccatg
     1681 ccggccgtgc gcgctctgct ggtggcgctc gacgagtggg tggtatcggg caaggaaccg
     1741 ccggccagcc gcgtgccgac gctggccgcc ggcaccctgg tcgagcccga caagaccggc
     1801 tttcccgtcg tgccgggtgc cgtcgtggtc aaggtcacga accgggtgac gccgcccggc
     1861 gactgggttc atcccaagcc cgccgacaag gcctaccgca cgctggtctg caaggtcgac
     1921 gccgacggca acgaggcggc gggcgtgcgg ctgcccgaca tcgccgtgcc gcttgccacc
     1981 tattccggct ggaacgagta caagccgccc tatcccaaag gcgagctcgc cgaccgcgac
     2041 ggcagctgcc tgccgttcgc cctcgacaag gcggcgcggc aggcggcggg cgatccgcgg
     2101 ccctcggtcg ccgagcgcta tgccagcggc gccgattact tggccaaggt gcaggccgcg
     2161 gtcactgccc tgatgaacga tcggctgctg ctggccgagg atgccgaacg ctatctcgag
     2221 cgagcccgcc gcgagccgcg cgttgcgccg taaaggaagc cagtcatgcc caagctcgat
     2281 cgcgacggcg tcaagatcca ctacgagatc cacggttccg gaccgacgct gctgctcagc
     2341 cacggctaca gctcgaccgc acgcatgtgg gacggccagg tcgccgcctt gaaggaccgt
     2401 taccaggtca tcgtctggga catgcgcggc cacggtgact cggactatcc cagcgatgcc
     2461 aagctttatt ccgaggcgct gaccgtgggc gacatgaagg cgctgctcga tctggcaggc
     2521 gccaagaagg cgatcgtcgc cggcctgtcg ctgggcggct acatgtcgct cgccttcaac
     2581 gccagccatc ccgaccgggt gcgcgcgctg atgctgttcg acaccggtcc gggcttcaag
     2641 aaggacgaag cgcgcgccag gtggaacgag acggcgcacc agcgcgcggc caccttcgat
     2701 gccaagggac tggcggcgct caattcgtca gacgaggtca agctcacgcg ccatcgcgac
     2761 gccaccggcc tggccggcgc cgcgcgcggc atgctggc
//
LOCUS       DASWGA010000860         5053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1239718, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000860 DASWGA010000000
VERSION     DASWGA010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5053
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1239718"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..119
                     /locus_tag="VF991_19920"
     CDS             <1..119
                     /locus_tag="VF991_19920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012709196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEX9558772.1"
                     /translation="APRLKVLKVEEPPKRKSGIKVKTVAELIDKLRNEAGVI"
     gene            121..1056
                     /locus_tag="VF991_19925"
     CDS             121..1056
                     /locus_tag="VF991_19925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX9558773.1"
                     /translation="MAVLVVAAHDGKTVRNNVANTVTAALQMGPDVQVLVAGSNAGEA
                     AKSAAAIQGVAKVLDAEDAAYANWLAEDVAPLVVKLAPAYSHIVMAADSVGKNLAPRV
                     AALLDVAQISEAIKVVSPDTFVRPIYAGNAMATVQTADKIKVVTIRPTNFKAAAAGGS
                     APVEQIGGTGAGGLATYVGAELSKSERPELTSAKIVVSGGRGLASGENFKMLEALADK
                     LGAGLGASRAAVDAGYVPNDYQVGQTGKVVAPDLYSAVGISGAIQHLAGMKDSKTIVA
                     INKDEEAPIFQVADYGIVGDLFQIVPELTAAVEKK"
     gene            1081..1953
                     /locus_tag="VF991_19930"
     CDS             1081..1953
                     /locus_tag="VF991_19930"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HEX9558774.1"
                     /translation="MIKRIGVIGAGQMGSGIAHVCALKGFDIRLADVDQAHLDKGIEA
                     IGHNMDRQIGRGMIRPEEKDSALKRIAPAVDYKQFADCDLIVEAATENEAVKREIFKK
                     VCEGLPPNVLLATNTSSISVTRLASVTDRPGKFMGMHFMNPVPMMGLVELIRGIATEE
                     ETFRAVREVVVRLDKKPVNAEDFPAFIVNRILLPMINEAVYALYEGVGNVEAIDTGMK
                     LGANHPMGPLELADFIGLDTCLSVMQVLHEGLADSKYRPCPLLVKYVEAGWVGRKVKR
                     GFYDYSGERPVPTR"
     gene            complement(2230..3342)
                     /locus_tag="VF991_19935"
     CDS             complement(2230..3342)
                     /locus_tag="VF991_19935"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9558775.1"
                     /translation="MTNRVIDADGHICEPPAVWNDYIEKRYRADAIRVERDPDGRDWI
                     SVNGAMRRNLRPAAACVPWGMDDPNKVPSWEDILPGSYEGGARAKVLEEEGIERSLLF
                     PSLYLLAGDIEDPAVAAAACYGYNEWIADMCRDGNGKLSAVGIVPLQNPEAAAREAEH
                     IARLGLKGACFRPERYKGLALYDDSLRPFWQAVAGNGLFAAVHGSFGSLMPSFATSRY
                     DNLFFSHMICHPFEQMAACLDIVAGGVLERHPNLRVAFLESGLGWLEYWLDRLDGHFE
                     SMRHHVPWLTRRPTELFREQCFISIESDEAHRLPRLGEMGLEHCVFWGADYPHYDCTY
                     PGAVKELEKNLAPLPAALADGVRWRTAERFLGLAGE"
     gene            3407..4891
                     /locus_tag="VF991_19940"
     CDS             3407..4891
                     /locus_tag="VF991_19940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M81 family metallopeptidase"
                     /protein_id="HEX9558776.1"
                     /translation="MTRRPIRIAVLHFAHETVTFLNNDTTLDDFIYKGSPAKGEALLT
                     HDRKSYMGGFVKVAREFDGVELVGIESPLWPKTGTGSGWVTREAYETFVGKMIAEIEA
                     QGRFDGVYLSLHGAMGVRGVPRPEAELARRVREVVGRDAFIVGTFDPHGNEDEEFLRH
                     ADMAFTVKYFPHYDSYLQGERAARMLVRAIRGDYKPATVTVRVPIISPTVLQWTGASP
                     WMDLVQRALTWEAREPDVYVNFFFGFPFADVPDVGMTFQVMTNGDAALARRVADDMAS
                     ATWRRRERLLGSTKVHTIAEGVKHAKEAVARGATPVVLADHSDRSGSATWLLKEIIEQ
                     DLSDVLIATLADAEASDALKAKVVKAGDPFDMEVGGRVDESAGAPVRIQGTVLNAVEG
                     YGQFWVVVKFGRGNVLVLSRYLVQVMEPEPLNALGFDVAAFKVIAIKSRVHFRRGFDD
                     SGFAKTILLVEPVEPFLGTVRLDGLPYQNVDLKRFYPYGEPQFP"
BASE COUNT          900 a         1632 c         1681 g          840 t
ORIGIN      
        1 tcgcgccgcg gctcaaggtg ctgaaggtcg aggagccgcc caagcgcaag tccggcatca
       61 aggtgaagac cgtggccgag cttatagaca agctgcgcaa cgaagcggga gtgatctgac
      121 atggccgtcc tggttgtcgc cgcgcatgac ggcaagaccg ttcgcaacaa cgtcgcgaac
      181 acggtgacgg ccgccctgca gatggggccc gacgtgcagg tgctggtcgc cggaagcaat
      241 gccggcgagg ccgccaagtc ggccgccgcc atccagggcg tggccaaggt gctggatgcc
      301 gaggatgcgg cctacgccaa ctggctggcc gaggacgtgg cgccgctcgt ggtcaagctc
      361 gcgccggcct acagccacat cgtgatggcc gccgattccg tgggcaagaa cctcgcgccg
      421 cgcgtggcgg ccctgctcga cgtggcgcag atctccgagg cgatcaaggt cgtctcgccc
      481 gacaccttcg tgcgcccgat ctatgccggc aacgccatgg ccaccgtgca gacggccgac
      541 aagatcaagg tcgtcaccat ccgcccgacc aacttcaagg cggcggcagc cggcggctcg
      601 gcaccggtcg agcagatcgg cggcaccggc gcgggcggcc ttgccaccta tgtcggcgcc
      661 gagctctcca agagcgagcg gcccgagctg accagtgcca agatcgtcgt atcgggcggc
      721 cgcggcctgg cgagcggcga gaacttcaag atgctggagg cgctggccga caagctgggg
      781 gccggcctcg gcgccagccg cgccgccgtc gacgcgggct acgtgcccaa cgactaccag
      841 gtcggccaga ccggcaaggt cgtggcgccc gacctctaca gcgccgtcgg catctccggc
      901 gcgatccagc acctcgccgg catgaaggac agcaagacca tcgtggcgat caacaaggac
      961 gaggaagcgc cgatcttcca ggtggccgac tacggcatcg tcggcgatct cttccagatc
     1021 gtgccggagc tgaccgccgc ggttgaaaag aagtaagtca gggattccgg agtacccatc
     1081 atgatcaagc gcatcggcgt catcggcgcc ggccagatgg gcagcggcat cgcccatgtc
     1141 tgcgcgctca aggggttcga tatccgtctc gcggacgtcg atcaggcgca cctcgacaag
     1201 ggcatcgagg cgatcggcca caacatggac cgccagatcg gccgcggcat gatccggccc
     1261 gaggaaaagg actcggcact gaaacgcatc gcccccgccg tcgactacaa gcagttcgcc
     1321 gactgcgacc tgatcgtcga ggcggcgacc gagaacgagg cggtcaagcg cgagatcttc
     1381 aagaaggtct gcgagggcct gccgcccaac gtgctgttgg ccaccaacac ctcgtcgatc
     1441 tcggtgacgc ggcttgcctc ggtgaccgac cggccgggca agttcatggg catgcacttc
     1501 atgaacccgg tgccgatgat gggcctggtc gagctgatcc gcggcatcgc caccgaggag
     1561 gagaccttcc gcgccgtgcg cgaggtggtg gtgcggctcg acaagaagcc ggtcaacgcc
     1621 gaggacttcc cggctttcat cgtcaaccgc atcctgctgc cgatgatcaa cgaggcggtc
     1681 tacgcgctct acgagggcgt cggcaatgtc gaggcgatcg acaccggcat gaagctcggc
     1741 gccaaccacc cgatggggcc gctcgagctc gccgacttca tcggcctcga cacctgtctt
     1801 tcagtgatgc aggtgctgca cgaaggcctg gccgattcga agtatcgccc atgcccgctg
     1861 ctcgtgaagt acgtcgaggc cggctgggtc ggccgcaagg tcaagcgcgg cttctacgac
     1921 tattccggcg agcgtccggt tccgacgcgg tgattgccgt tttgtcatcc tgagcgaagc
     1981 caaggatctc atgccggtgg caagcggcga tgagttcagt gacatcatga agaagctggt
     2041 acctcacatt actgtcgtgg cagttctcgc cgccttagtg tcgacggtcc ttcccgcggg
     2101 tctgcaaggc aatgaacaag cactgcgagg tcggcgactg attttttcct aagtgcctgg
     2161 aatagaacgt tttttatgct tctatttcga tatttacgga aatagccttt acccgtcaac
     2221 ggtgcttgct tattcgcctg cgaggccgag aaagcgctcc gccgtccgcc agcgcacgcc
     2281 atccgcgagc gcggccggca gcggtgccag gttcttctcc agctccttca ccgcgccggg
     2341 ataggtgcag tcgtaatggg gatagtcggc gccccagaac acgcagtgct ccaggcccat
     2401 ttcacccagc cgcggcaggc gatgggcctc gtccgattcg atcgagatga agcactgctc
     2461 gcggaacagc tcggtcggcc ggcgggtgag ccacggcacg tggtggcgca tcgactcgaa
     2521 atggccgtcc agccggtcga gccaatattc cagccagccc aggcccgatt ccagaaaggc
     2581 gacgcgcagg ttcggatgcc gctcgagcac gccgccggcc acgatgtcga ggcaggccgc
     2641 catctgctcg aagggatggc agatcatgtg gctgaagaag agattgtcgt agcggctggt
     2701 ggcgaagctc ggcatcagcg agccgaagct gccgtgcacg gcagcgaaca ggccgttgcc
     2761 ggcgaccgcc tgccagaacg gtcgcagtga atcgtcgtag agagccaagc ccttgtagcg
     2821 ttcgggacgg aagcaggcgc ccttcagtcc gaggcgggcg atgtgctcgg cctcgcgcgc
     2881 ggcagcctcg gggttttgca gcggcacgat gcccacggct gaaagcttgc cgtttccgtc
     2941 gcggcacatg tcggcgatcc attcgttgta gccgtagcag gccgcggcgg cgaccgctgg
     3001 atcctcgatg tcgccggcca agagatagag cgacgggaac agcagggagc gctcgatgcc
     3061 ttcctcctcc aagactttgg cacgcgcgcc gccttcgtat gaaccgggca ggatgtcctc
     3121 ccagctcggc accttgttgg gatcgtccat gccccacggc acgcaggccg ccgcgggacg
     3181 gaggttgcgg cgcatcgcgc cgttgaccga gatccagtcg cggccgtcgg ggtcgcgctc
     3241 gacccggatg gcgtcggcgc ggtagcgctt ctcgatatag tcgttccaca cggcgggggg
     3301 ctcgcagata tgcccatccg cgtcgatgac gcggtttgtc atttgtttcc tccctgatct
     3361 cttgcgagac ttcgcttgcc gccctctcgg cgcaaggaaa aatcgtatga ctcgccggcc
     3421 gatccgcatc gcggtcctgc acttcgccca tgagacggtg acgttcctca acaacgacac
     3481 gacgctcgat gatttcatct acaagggctc gccggccaag ggcgaggcgc tgctgacgca
     3541 cgaccgcaag tcctacatgg gcggtttcgt gaaggtggcg cgcgagttcg acggcgtcga
     3601 acttgtcggc atcgaatcgc cgctctggcc caagaccggg accggatccg gctgggtgac
     3661 gcgcgaagcc tacgagacgt tcgtcggcaa gatgattgcg gagatcgagg cgcaaggccg
     3721 cttcgatggc gtctatctca gcctgcatgg cgccatgggc gtgcgcggcg tgccgcggcc
     3781 cgaggccgaa ctggcgcggc gggtccgcga ggtcgtgggc cgcgatgcct tcatcgtcgg
     3841 caccttcgat ccgcacggca acgaggacga ggaattcctg cgtcacgccg acatggcgtt
     3901 cacggtcaaa tacttcccgc actacgacag ctacctgcag ggcgagcgcg cggcgcgcat
     3961 gctggtgcgg gcgatccgcg gcgactacaa gcccgccacc gtcacggtac gcgtgccaat
     4021 catctcgcca accgtgctgc aatggaccgg cgcgtcgccg tggatggacc tcgtgcagcg
     4081 cgccctcacc tgggaggcgc gcgagcccga cgtctatgta aacttcttct tcggctttcc
     4141 cttcgccgac gtgccggatg tcggcatgac cttccaggtc atgaccaacg gcgatgccgc
     4201 cttggcgcgc cgggtggccg acgacatggc gtcggccacc tggcgccgac gcgagaggct
     4261 gctcggctcg accaaggtcc acaccattgc ggagggcgtg aagcatgcaa aggaggccgt
     4321 ggcgcgcggc gcgacgccgg tggtgctggc cgaccacagc gaccgatcgg gctcggccac
     4381 ctggctcctg aaggagatca tcgaacagga tctttccgat gtgctgatcg ctaccttggc
     4441 cgacgccgag gcgagcgacg ctctaaaggc caaagtcgtg aaggcgggcg atccgttcga
     4501 catggaagtg ggcggacgtg tcgacgaatc ggccggcgcg ccggtgcgca tccaaggcac
     4561 cgtgctgaat gccgtcgagg gctatggcca gttctgggtg gtcgtgaagt ttggccgcgg
     4621 caacgtcctg gtgctcagcc gctacctcgt gcaggtgatg gagccggagc cgctgaacgc
     4681 gctcggcttc gatgtcgccg ccttcaaggt gatcgccatc aagtcgcgcg tgcacttccg
     4741 gcgcggcttc gacgacagcg gctttgccaa gacgatcctg ctggtcgaac cggtcgagcc
     4801 gttcctcggc acggtgcggc tcgacgggct gccgtaccag aacgtcgatc tgaagaggtt
     4861 ctatccctac ggcgagccgc agttccccta gaagcccgag cgcgtcggcg ccacgacgat
     4921 gtcgcggatg cagatcgtgg gcggcagctt ccagcaatag agcacgacct cggccagctc
     4981 ctcggcggac aggaaagcag gattgccgag gagacggcaa tattcctcga agctgatgcc
     5041 catgccctgg tgg
//
LOCUS       DASWGA010000861         7430 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_865390, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000861 DASWGA010000000
VERSION     DASWGA010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7430
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865390"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(277..1791)
                     /locus_tag="VF991_19945"
     CDS             complement(277..1791)
                     /locus_tag="VF991_19945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558777.1"
                     /translation="MKQPVRSAALAFVLSLAATTAFAQTHLRIGLGDDPDGLDPTTSR
                     FYTTRIVFAALCDKLFDIDEKSNIVPQLALSHETSADGKTVTIKLRPGVKFHDGEPFN
                     AEAAKYSLERHMNMKGSFRKPELAAVDSVETAGPLAIKLNLKQPFSPLLSQLTDRAGM
                     MVSPKVAEAAGDKFALKPVCAGPYKFVERVAQDRIVVEKFADYWNKEHVFIDKITYLP
                     IVDSTVRLANLRSGGLDMMERVLATDIKTVRDDPKLKLSKAVSLGFFALLINVANGPK
                     ADNPLGKDARVRRALELSIDREALNQVVFNGEFVPGNQWVNPQSPYYQQAFPIPKRDV
                     AKAQALMKEAGVTGRLSIDFMIANSPEIRAVGEVLQSMTAEAGFDLKLRVVEAATALK
                     TAEDGDFQLYENNWSGRIDPDGNTVLYQTCGSPLNTGRYCDKDIDAWHREVRASSDFA
                     TRKAVYEKITAKFLAEGWMIYLFHPQYLIAHTARLENFKPMPDGLIRVMDMRLK"
     gene            complement(1916..2881)
                     /locus_tag="VF991_19950"
     CDS             complement(1916..2881)
                     /locus_tag="VF991_19950"
                     /inference="COORDINATES: protein motif:HMM:NF013589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEX9558778.1"
                     /translation="MSGESEGPRSSDDDQTLPFQLDALGVRGRLVRLGASLDAVIERH
                     GYPLAVARPLAEAMVLCAALATSLKYDGIFTLQISGDGPIRLLVTDLTTEGALRGYAQ
                     FDSWKLAVALGAGTSEAPEGYVPKLFGHGRLAFTVDQGQHTERYQGVVPLEGATLADC
                     AHIYFRQSEQLPTGIKIAARRIVEKGAAHWRAAALMVQQMPEFDAGRIDVDHEQREDD
                     WRKAVILMASATEAEMLDASLPGTALLHRLFHAERPRLFTRRAFTARCRCSRRRIDRV
                     LRSIKREELDDLRDKSGRVVVKCEFCSTEYAYDDRDLDRIYASAA"
     gene            complement(2892..3818)
                     /gene="argF"
                     /locus_tag="VF991_19955"
     CDS             complement(2892..3818)
                     /gene="argF"
                     /locus_tag="VF991_19955"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEX9558779.1"
                     /translation="MAVPKHFLDLDQVDPKTLRQILDRGKAMKTARSNGGHDKPLGGK
                     TLAMIFEKPSTRTRVSFEVGMRELGGQTVMLGRTDTQLGRGETIADTARVLSRYVDII
                     MMRTTVEEKLFEMAKYATVPVINGLTDKTHPCQLMADVMTYEEHRGPIQGKAIAWSGD
                     GNNMATSWIHAAVQFDFELRVACPPELKPPADVLAWAEKSKGRITIGHDPEAIVRDAD
                     CVVTDTWVSMGDEDPHSPSAARRHNLLRGYQVDQRLMKQAKSDAIFMHCLPAHRGEEV
                     TAEVIDGPQSVVFDEAENRLHAQKSILAWCLS"
     gene            complement(3823..5010)
                     /locus_tag="VF991_19960"
     CDS             complement(3823..5010)
                     /locus_tag="VF991_19960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX9558780.1"
                     /translation="MPTYGRKDVVFERGEGNYLYAADGRRFLDFTSGIAVNALGHCHP
                     TLVKALAEQGARLWHTSNLYRVGNGEKLAKRLVELTFADTMFFCNSGAEAIEGGIKLI
                     RKYQYVNGKPKRYKLICFQAAFHGRLLNALAATGNEKYLEGFGPPAPGYRHAPLNNAN
                     VVRDMIDDETAGILVEPIQGEGGVRGTTPEFLKALRAMCEEFGLLLFYDEIHTGFGRT
                     GKLFAYEWSGVAPDVMAVAKGMGGGFPIGAFMATEKAAVGMVPGTHGSTYGGNPLATG
                     VANAVLDVLLQPGFIDGVHERGEYLKGKLQALIAKHPKVFAEGRGTGFLQGLRCEVPA
                     GEMVDRLLSLGMLVPIAGENVVRLFPALIADKAALDEGVAILEKAAQSFEAAGQGANK
                     AAE"
     gene            5356..7098
                     /locus_tag="VF991_19965"
     CDS             5356..7098
                     /locus_tag="VF991_19965"
                     /inference="COORDINATES: protein motif:HMM:NF006624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acyl-AMP ligase"
                     /protein_id="HEX9558781.1"
                     /translation="MNALPTRNSQLALRRANFRSVAEMLDYAAGGETGIAFYDVRGES
                     LSTLPWRDVRARAQVTARRLIGAGFAPGERILITADTWPGFFDTFFGAQYAGLLPVPV
                     SIPVGIGGKDAYLDQLRRQLAASGAVAAVGIDDLAGFLADAAREFPAVRLHGGMAAIE
                     ALPEKQVDLRPLGADDLCYIQFSSGSTRHPHGVQITQRALMANLAGMTGPAGLDVVAG
                     DRAVSWLPLYHDMGLIGFLMAPLSSQLSIDYLTPRDFARRPTQWLNLISRNRGTIAYS
                     PSFGYDLATRRAANQVPADLDLSSWRHAGIGGDMIRPDVLERFAEAFGGAGFSAKAFI
                     PSYGMAEVCLAITFCPHGTGVRTDTVDRTALADSQRAQPAAEPADAHRARRFVVCGKV
                     LPGHRLEVRGEDGKVLADREVGRIFVNGPSIMPGYFAEPEATREVLSDDGWLDTGDLG
                     YMLAGEIVVTGRAKDLIIVNGRNIWPQDIEWAIEAKRVVKNGDVAAFSVDTAEGERVV
                     VAVLARVSGEEARQALARDVAGAVREVVAVDCDVVLVPPAIGLPTTSSGKLARARVRA
                     NYLAGLYSPKTEAA"
BASE COUNT         1151 a         2450 c         2511 g         1318 t
ORIGIN      
        1 cgccaccgag gccggcatct tccgcaagac gctcggcgtg ccgaccgtgg tgtgcgggcc
       61 gggcgacatc gcccaggcgc accagcccaa cgagttcatc ctcgcctcgc agatcgacgc
      121 ctgcgagggc ttcatgcggc gcatggtgga atgggcctgc cgggactaag aggtgctgtc
      181 atcccgagcg cagcgaggga cctttgatcg acatcgcgaa aggtccctcg cttcgctcgg
      241 gatgacaccg agcgcttact cgctctcgac cccgcgctac ttcagccgca tgtccatcac
      301 acggatcagg ccgtcgggca tcggcttgaa attctccagt cgcgccgtgt gggcgatcag
      361 gtattgcgga tggaagagat agatcatcca tccctcggcc aggaacttgg cggtgatctt
      421 ctcgtagacc gctttgcgcg tcgcgaagtc actggaggcc cggacctcgc gatgccaggc
      481 atcgatgtcc ttgtcgcagt aacggcccgt gttcagcggc gagccgcagg tctggtagag
      541 gaccgtgttg ccgtcggggt cgatgcggcc gctccagttg ttttcgtaga gctggaaatc
      601 gccgtcctcg gccgtcttga gcgccgtcgc cgcctcaacg acacgcagct tcaggtcgaa
      661 gccagcctcg gccgtcatcg actgcaggac ttcgccgacg gcgcggatct cggggctgtt
      721 ggctatcatg aagtcgatcg aaagccgccc tgtgacgccg gcctccttca tcaaggcctg
      781 ggccttggcg acgtcgcgtt tggggatggg gaaggcctgc tggtagtacg ggctctgcgg
      841 gttgacccac tgattgcccg gcacgaactc gccgttgaac acgacctggt tcagcgcctc
      901 gcggtcgatc gacagttcca gcgcgcggcg cacgcgggca tccttgccca gcgggttatc
      961 ggccttgggg ccgttggcga cgttgatcag aagggcaaag aagcccagcg aaacggcctt
     1021 gctaagcttt agcttgggat cgtcgcgcac cgtcttgatg tcggtcgcca gcacgcgctc
     1081 catcatgtcc agcccgcccg acctcaagtt ggccagccgc acggtgctgt cgacgatcgg
     1141 caggtaggtg atcttgtcga tgaaaacgtg ttccttgttc cagtagtcgg cgaacttctc
     1201 gaccacgatg cggtcctgcg cgacgcgctc gacgaacttg taggggccgg cgcaaaccgg
     1261 cttgagcgcg aacttgtcgc cggctgcctc cgccaccttg ggcgagacca tcatgccggc
     1321 gcgatcggtg agctgggaaa gcagtggcga gaagggctgc ttgaggttga gcttgatggc
     1381 gagcggaccc gccgtctcga cgctgtccac ggcggcaagc tcgggcttgc ggaacgaccc
     1441 tttcatgttc atgtgccgct cgaggctgta cttggccgct tcggcattga atggctcgcc
     1501 gtcgtgaaac ttcacgccag ggcggagctt gatcgtgacc gtcttgccgt cagccgatgt
     1561 ctcgtggctg agcgcgagct gcggcacgat gttcgacttt tcgtcgatgt cgaacagctt
     1621 gtcgcacagc gcggcaaaga caatgcgggt ggtgtagaag cgcgacgtgg tgggatcgag
     1681 gccgtccgga tcatcaccga ggccgatgcg caggtgggtc tgggcgaagg cggtggttgc
     1741 tgccaacgaa aggacgaaag ccaatgcggc tgagcggact ggttgcttca tggtgcctcc
     1801 ccaaaacact ctgtcatccc gagcgcagcg agggaacttt gatcggcgtc gcgaaaggtc
     1861 cctcgcttcg ctcgggatga caaggcgcgc tgcacacgcc atgccattcg gctttttacg
     1921 ccgccgaggc gtagatccgg tcgaggtcgc gatcgtcgta agcgtattcg gtcgagcaga
     1981 attcgcactt cacgaccacg cgaccgctct tgtcgcgcag atcgtcgagc tcctcgcgct
     2041 tgatggaacg cagcacgcgg tcgatgcgcc ggcggctgca gcggcagcgc gcggtgaagg
     2101 cgcggcgggt gaacagccgc ggccgttcag cgtgaaacag ccgatggagc agggcggttc
     2161 cgggcaggct cgcgtccagc atctcggctt cggtcgccga ggccatcagg atcaccgcct
     2221 tgcgccagtc gtcctcgcgc tgctcgtgat cgacgtcgat gcggccggca tcgaactcgg
     2281 gcatctgctg caccatcagc gccgccgccc gccagtgcgc cgcgcccttt tcgacgatgc
     2341 gccgggcggc gatcttgatg ccggtcggca actgctcgga ctggcgaaaa tagatgtggg
     2401 cgcagtcggc gagcgtggcg ccctcgagcg gcaccacgcc ttggtagcgc tcggtgtgct
     2461 ggccctgatc gacggtgaag gcgagccggc cgtggccgaa cagcttcggc acgtagcctt
     2521 ccggcgcttc gctggtgccg gcgcccagcg ccacggcaag cttccaggag tcgaactggg
     2581 cgtagccgcg cagcgcgccc tcggtcgtga ggtcggtgac cagcaggcgg atcggcccgt
     2641 cgcccgagat ctgcagggtg aagatgccgt cgtatttcag cgatgtcgcc agggcggcgc
     2701 acagcaccat cgcctcggcg agaggccgcg ccacggccaa gggatagcca tggcgttcga
     2761 tgacggcgtc gagtgacgcg ccgagccgca ccagccggcc gcgcactccc agcgcatcga
     2821 gctggaaggg cagggtctgg tcgtcgtcgg aagagcgagg gccttccgac tcgccgctca
     2881 cgatggcgtg ctcatgacag gcaccacgcg agaatgctct tctgggcgtg caggcggttt
     2941 tccgcctcgt cgaacaccac cgactgcggc ccgtcgatca cctcggcggt gacctcctcg
     3001 ccgcgatgcg ccggcaggca gtgcatgaag atggcgtccg atttggcctg cttcatcagc
     3061 cgctggtcga cctggtagcc gcgcaaaagg ttgtgccggc gggcggcact cgggctgtgc
     3121 ggatcctcgt cgcccatcga cacccaggtg tcggtgacga cgcaatcggc gtcgcgcacg
     3181 atcgcctcgg gatcatggcc gatggtgatg cggcccttcg acttctcggc ccacgccagc
     3241 acgtcggccg gcggtttgag ctcgggcggg caggccacgc gcagctcgaa gtcgaactgc
     3301 acggcggcgt ggatccagct cgtcgccatg ttgttgccgt cgcccgacca ggcgatcgcc
     3361 ttgccctgga tcgggccgcg atgctcctcg taggtcatca cgtcggccat cagctggcag
     3421 ggatgcgtct tgtcggtgag cccgttgatc accggcacgg tcgcatactt ggccatctcg
     3481 aacagcttct cctcgaccgt ggtgcgcatc atgatgatgt caacgtagcg gctgagcaca
     3541 cgcgcggtgt cggcgatggt ctcgccgcgg ccaagctggg tatcggtgcg gccgagcatg
     3601 acggtctggc cgccgagctc gcgcatgccg acctcgaacg acacgcgggt gcgggtcgac
     3661 ggcttctcga agatcatggc cagcgtcttg ccgcccagcg gcttgtcgtg cccgccgttg
     3721 gagcgcgccg ttttcatcgc cttgccgcga tcgaggatct ggcgaagcgt cttgggatcg
     3781 acctggtcga ggtcgaggaa atgcttgggg accgccatga cgctactcgg cggccttgtt
     3841 cgcaccttgg ccggcggcct cgaacgactg cgcggccttc tcgaggatgg cgacgccctc
     3901 gtcgagtgcg gccttgtcgg cgatcagcgc cgggaagagg cggaccacgt tctcgcccgc
     3961 gatcggcacc agcatgccga gcgacagcag gcggtcgacc atctcgcccg ccggcacctc
     4021 gcagcgcaag ccctgcagga agcccgtgcc gcgcccttcg gcgaacacct tgggatgctt
     4081 ggcgatcagc gcctgcagct tgcccttgag gtactcgccg cgctcgtgga cgccgtcgat
     4141 gaaacccggc tgcaaaagca cgtcgagcac ggcgttggcc acgccggtgg ccagcgggtt
     4201 gccgccgtag gtcgagccat gggtgcccgg caccatgccg acggcggcct tctcggtcgc
     4261 catgaaggcg ccgatcggga agccgccgcc catgcccttg gcgaccgcca tgacgtcggg
     4321 cgccacgccc gaccattcgt aggcgaacag cttgccggtc cggccgaaac ccgtgtggat
     4381 ctcgtcgtag aacaagagca ggccgaactc ctcgcacatc gcgcgcagcg ccttcaggaa
     4441 ctcgggcgtc gtgccgcgca cgccgccctc gccctggatc ggctcgacca ggatgccggc
     4501 ggtctcgtcg tcgatcatgt cgcgcacgac gttggcgttg ttgagcggcg catggcggta
     4561 gcccggcgcc ggcggaccga agccttcgag gtacttctcg ttgccggtgg cggcgagcgc
     4621 gttcaacagg cgaccgtgga atgccgcctg gaagcagatc agcttgtagc gcttgggctt
     4681 gccgttgacg tactggtact tgcggatgag ttttatgccg ccctcgatcg cctcggcgcc
     4741 cgagttgcag aagaacatcg tgtcggcgaa ggtcagctcg accagccgct tggccagctt
     4801 ctcgccgttg cccacccgat agaggttgga ggtgtgccac agcctggcgc cctgctcggc
     4861 caacgccttg accagagtgg ggtggcagtg gcccagcgca ttcacggcga tgccggacgt
     4921 gaagtcgagg aaacgtcggc cgtccgccgc gtagagatag ttgccctctc cgcgttcgaa
     4981 cacgacgtcc ttgcgaccgt acgtcggcat aacagccgta atcacgagac cctccacaaa
     5041 agaaatgccc gctcttcgac cacggctccg gaacggattg accggggttg agcgggggcc
     5101 ggcactatct taccggggtc ggggtgtgtc aacttggccc accgtctcac catgtcccct
     5161 caaattcctc tccccccgct agggcgagag gctagcttca tgctcctctc ccccttgggg
     5221 gagaggttgg gtgagggggt tacgcacggc ctttgacccc cctcacctgg cctctccccc
     5281 aagggggaga ggagcatgag ccaacctctc cccctagcgg gggagaggag cttggtgcta
     5341 ggagagccgg cttccatgaa tgcgctgccc acccgcaatt cccagctcgc cttgcgtcgc
     5401 gccaacttcc ggtcggtggc cgagatgctg gactatgcgg ccggcggcga gaccggcatc
     5461 gccttttatg atgtccgggg cgagagtctc tcgaccctgc cgtggcgcga cgtccgcgcc
     5521 cgcgcccagg tcacggcccg ccggctgatc ggcgcgggct tcgcccccgg tgaacgaatc
     5581 ctgatcacgg ccgacacctg gcccggcttt ttcgacacct tcttcggggc gcagtatgcc
     5641 ggcctgctgc cggtgccggt ctcgatcccg gtcggcatcg gcggcaagga cgcctatctc
     5701 gaccagctgc gccgccagct tgcggcctcc ggtgcggtgg cggcggtggg catcgacgat
     5761 ctcgcgggct tcctggccga cgccgcccgg gaattcccgg cggttcgctt gcacggcggc
     5821 atggccgcga tcgaggcgct gccggagaag caggtcgatc tcaggccgct cggcgccgac
     5881 gacctttgct acatccagtt ctcctcgggc agcacgcgcc atccgcatgg tgtgcagatc
     5941 acccagcgcg ccctgatggc caatctcgcc ggcatgaccg ggccggccgg cctcgacgtg
     6001 gtcgccggcg accgcgcggt gagctggctg ccgctctatc acgacatggg cctgatcggc
     6061 ttcttgatgg cgccgctgtc gagccagctt tcgatcgact atctgacgcc gcgcgacttc
     6121 gcgcgccggc cgacgcagtg gctcaatctc atctcgcgca accgcggcac catcgcctac
     6181 agcccgagct tcggctacga cctcgccacc cgccgcgccg ccaaccaggt gccggccgat
     6241 ctcgacctgt cgagctggcg gcatgccggc atcggcggcg acatgatccg gcccgatgtc
     6301 ctcgagcgat tcgctgaagc gtttggcggc gcgggcttca gcgccaaggc cttcatcccg
     6361 agctacggca tggccgaagt ctgcctggcc atcaccttct gcccgcacgg cacgggggtg
     6421 cgcaccgaca ccgtcgaccg taccgcgctg gccgacagcc agcgtgccca gccggccgcc
     6481 gagccggcgg atgcgcatcg cgcgcgccgc ttcgtggtgt gcggcaaggt gctgcccggc
     6541 catcgcctgg aggtgcgcgg cgaggacggc aaggtgctgg ccgaccgcga ggtcggacgc
     6601 atcttcgtca acggtcccag catcatgccg ggctatttcg ccgagcccga ggccacgcgc
     6661 gaggtgctgt cggacgacgg ttggctcgat accggcgatc ttggttacat gctggcgggc
     6721 gagatcgtcg tcaccggccg cgccaaggat ctgatcatcg tcaacggccg caacatctgg
     6781 ccgcaggaca tcgagtgggc gatcgaagcc aagcgcgtgg tcaagaacgg cgacgtggcg
     6841 gccttctcgg tcgataccgc cgagggcgag cgggtcgtgg tggcagtgct ggcgcgcgtg
     6901 tcgggcgagg aggcgcgcca ggcgctggcg cgcgacgtgg ccggcgccgt gcgcgaggtg
     6961 gtggcggtcg actgcgacgt cgtgctggtg ccgcccgcca tcggcctgcc gacgacgtcg
     7021 tcgggcaagc tcgcgcgcgc gcgcgtcagg gccaattatc ttgccggctt gtattcccca
     7081 aagaccgaag cggcgtgagc ctgcctctat tcctccccgt cgcggagtcc gcgacgggga
     7141 ggtgtcgccg tcatacggcg acggaggggt catgagtcga aggttcactg ttgcccatga
     7201 cccctccgtc cgctgcgcgg acacctcccc ttcgcggact ctgttcagac cggagagaag
     7261 gtaaacgggt gttcggggac atgggtaaca catctcagat tagctcagtt tattgatttg
     7321 agatcgactg acctgacgct gacgtggcgg aagacgaggt cgaagacgcc atcggttggc
     7381 gttggtcgca gagccacgtc tttcctgacg agcgctctgg aagctttgag
//
LOCUS       DASWGA010000862         6017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1752524, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000862 DASWGA010000000
VERSION     DASWGA010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6017
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1752524"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VF991_19970"
     CDS             complement(<1..352)
                     /locus_tag="VF991_19970"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9558782.1"
                     /translation="MRLYSGPLSMFGAKAEIAAHEKGLAFELIMVPFEMKTLYQPKHP
                     EVLRINPKRQVPVLIDGDLEIFDSTQIFEYFETIKPEPALWPADAKARARARLLEHKS
                     DEVYFPPIVRLMGLQ"
     gene            424..1545
                     /locus_tag="VF991_19975"
     CDS             424..1545
                     /locus_tag="VF991_19975"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9558783.1"
                     /translation="MALLALVASPASVLAGEPKVCGAPIALNDGWTLAAQAEVGLDAA
                     RLCELDSFVAQWPDANIHAVVVVRNGKLAMERYFSGEDERWGDKLGRVTYGPEGKHAL
                     RSISKSVTSLLVGIALSEGKFPALDSPVFDAFPDYADLRTPEKARITFRHLLTMSAGL
                     AWDENRPWNDPRNNEAGMILAADPFRYILSQPVAHPAGTVYAYSGGGTSLLGETLVRS
                     TGRSLRDYAREKLFVPIDAPDFEWLDAGVSRKLGAFGSLRLRPRDAAKLGRLLLTDGQ
                     WNGQQVVPAGWAAESIKPRINGEGLFFYGYQWWLGRSFRNGGELVWAAGVGLGGQRLY
                     VVPALDLVVMINAGHYSGPLQGVIPAGIFNRVVLPAVKD"
     gene            complement(1549..3543)
                     /locus_tag="VF991_19980"
     CDS             complement(1549..3543)
                     /locus_tag="VF991_19980"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9558784.1"
                     /translation="MTRIRLGRRGFILAGSLAASTHGVSAQPAPSLIPRRLLFAGPER
                     ARVTISPDGKLIAFLGPVDGVLNVWLAPVGDPAAARPLTRITDRDVQYQLWWPHDNRH
                     VVFFREQGGDENWQAHRVDIATGEIRALTPGPGVKSYVQQVSAHFPGEMLIAHNQRDK
                     RYSDIYRINVATGESTLLQRNDAFAWMFSDPQFRVPWGVRYRPDGGFDMVKVGGEDTG
                     SLFRRIEAADTFTTQPIEISDDGRTLYWRDSKDRDRAAIVAQDLESGRLSVMAEDAEA
                     DFAEPLLDPVSRVPIAAPVVYTKRRWQTLDPAASGDLERMVTSGEGELAWFGTSNDRG
                     NWIGYVEPAGAPGRYIHYERSSGRVRRLFSSRPALESAPLVPLRPLVVSARDGLKLVC
                     YLSQPREAAAGRPGPMVLLVHGGPWGRDFPDFNTTHQWLANRGYSVLSVNFRGSTGFG
                     KSFVNAADREWAGKMHDDLIDAVDWAIAQRIADPARVAIYGASYGGYSALVGATFTPQ
                     KFVCAVDLFGISNLVTFVNAIPPYWRSWESIWKVRMGDHTTEEGRRFLASRSPLTFVD
                     RIVRPLLIGQGANDVRVTVAESDQIVAEMQRRNIPVTYVHYSDEGHGFRRVENRRSFT
                     AVVEAFLAQHLGGSCEPVGEDFAGSSIEFRAGRNLIPSLG"
     gene            complement(3586..4872)
                     /locus_tag="VF991_19985"
     CDS             complement(3586..4872)
                     /locus_tag="VF991_19985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEX9558785.1"
                     /translation="MSVAQSRLGERLSLETLFKKLGPGVITGAADDDPSGIATYSQAG
                     AQAGFNLLWTVVLTWPLMVAVQSISARIGRVTGRGLAGNFALVFPPSVVTTLVLLLFI
                     ANTINLGADLAAMGAAVRLMLGWGSPHVYTFGFALFSLLAVVFIPYHRYVGLLKWFTF
                     SLLAYVGVVFTVKIDWQAVAVGALVPKFELSGEALTLVVAIFGTTISPYLFFWQCSQE
                     VEDEEADPEAGPLIDRPEQADHELNRIGWETWAGMAISNLIAFFIILTTAVTLHAAGK
                     TDIQSAEQAAEALRPIAGDAAFVLFSLGLIGTGLLAVPVLAGSVAYAVGEARGWRTGL
                     ERPLNEARPFYLVIALAIVVGIAVDFMGLDPIKALVWSAVVNGVIVVPIMAAMMVVAS
                     RRKLMGEFVAARWQRVLGWAATAIMAAAAIAMFFLM"
     gene            complement(4869..5672)
                     /locus_tag="VF991_19990"
     CDS             complement(4869..5672)
                     /locus_tag="VF991_19990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HEX9558786.1"
                     /translation="MLIAQISDMHVKAEGKLLYRRIDTAGFLERAVAHVNALDPRPDI
                     VLATGDLVDGGKSEEYAHLRRLLAPLAMPVHLIPGNHDARDALREAFPDHAYLPPTGF
                     LQYTIENLPVRLIALDTLVPGKPHGELCAERLDWLEARLDESDRPTVLFMHHPPFDCG
                     IAAFDNSRLSQGDARLAELVRRHDNVERLMCGHVHRPIQMRWAGAMASIAPSTAHQAT
                     LDLHDGATLSMMMEPPGLALHLWRPGTGLITHVSYIGTFDGPQPFRTLS"
     gene            complement(5778..>6017)
                     /locus_tag="VF991_19995"
     CDS             complement(5778..>6017)
                     /locus_tag="VF991_19995"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012708228.1"
                     /note="NH(3)-dependent; catalyzes the formation of
                     nicotinamide adenine dinucleotide (NAD) from nicotinic
                     acid adenine dinucleotide (NAAD) using either ammonia or
                     glutamine as the amide donor and ATP; ammonia-utilizing
                     enzymes include the ones from Bacillus and Escherichia
                     coli while glutamine-utilizing enzymes include the
                     Mycobacterial one; forms homodimers; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEX9558787.1"
                     /translation="EDSLPPYPVLDAILKGLIERDLGAEELAAEGHDLATVNRVWRLL
                     ESAEYKRRQAPPGVKITSRLISKERRYPIVNGFRG"
BASE COUNT         1029 a         2006 c         2023 g          959 t
ORIGIN      
        1 cctgcaggcc catcaggcgg acgatgggcg ggaaatagac ctcgtcggac ttgtgctcga
       61 gcagccgagc gcgggcgcgc gccttggcat cggccggcca cagcgccggc tcgggcttga
      121 tggtctcgaa atactcgaag atctgagtcg aatcgaagat ttccagatcg ccgtcgatca
      181 aaaccggcac ttggcgcttg ggattgatgc gcagcacctc gggatgcttg ggctggtaga
      241 gcgtcttcat ctcgaacggc accatgatca gctcgaacgc gagccccttc tcatgggctg
      301 caatctcggc cttggcgccg aacatgctga gcggtccgga atagagcctc atgcgcgaac
      361 gctaacacgc ccttgccggc cgccgcgcac gacgtaagtt aagtctggat gataagactg
      421 ttcatggctc tgctggcgct cgtcgcttcg ccggcctcgg tgctcgccgg agagccgaaa
      481 gtctgcggcg ctccaatcgc gctcaacgac ggttggaccc tcgccgcgca agccgaggtc
      541 gggctcgatg ccgccaggct gtgcgagctc gattccttcg tcgcccagtg gcccgacgcc
      601 aacatccacg ccgtcgtagt ggtgcgcaac ggcaaactcg cgatggagcg ctatttcagc
      661 ggcgaggacg agcgttgggg cgacaagctc ggccgcgtaa cctacggccc cgagggcaag
      721 cacgcccttc gctcgatctc caagagcgtg acgtcgctgc tggtcggcat cgcgctcagc
      781 gaaggcaaat tccccgcgct cgattccccg gtgttcgacg cctttcccga ctacgccgac
      841 ttacgcacgc cggagaaggc gcgcatcacc ttccgccacc tgctcaccat gtcggccgga
      901 ctggcttggg acgagaaccg gccgtggaat gatccgcgca acaacgaggc agggatgatc
      961 ctcgcggccg atcccttccg ctacatcctc tcacagccgg tcgcccatcc agcgggcacg
     1021 gtctacgcct attcgggcgg cgggacatcg ctgctcggcg agacgctggt gcgatccacc
     1081 ggccgcagct tgcgcgacta tgcccgcgaa aaactctttg tgccgatcga cgcgcccgac
     1141 ttcgaatggc tcgacgccgg agtcagccgc aagctcggcg ccttcggcag cctgcgattg
     1201 agaccgcgcg atgccgccaa gctcggccgc ctcttgctga ccgacggcca gtggaacggc
     1261 cagcaggtcg tgccggcggg ctgggcggcg gagtcgatca agccgcgcat caacggcgag
     1321 ggactgttct tctacggcta tcaatggtgg ctcggccgct ccttccgcaa cggcggcgag
     1381 ctcgtctggg cggccggcgt cggcttgggc ggccaacgct tgtacgtcgt gccggcgctc
     1441 gacctcgtgg tcatgataaa cgccggccat tacagcgggc cgctgcaggg cgtcatcccc
     1501 gccggcatct tcaacagggt cgtgctgccg gcggtgaagg attagcgcct aacccaggct
     1561 tgggatcagg ttgcggccgg cgcgaaattc gatgctcgag ccggcgaagt cctcgccgac
     1621 cggctcgcag ctgccgccga gatgctgggc gaggaaggcc tcgaccacgg cggtgaagga
     1681 gcggcggttc tcgacgcggc ggaaaccgtg gccctcgtcg ctgtagtgga cataggtcac
     1741 cggtatgttg cgacgctgca tctcggctac gatctgatcc gattcggcca ccgtcacgcg
     1801 cacgtcgttg gcgccctggc cgatcagcaa gggccgcacg atgcgatcga caaaggtgag
     1861 cggcgagcgg ctggccagga acctgcggcc ctcctcggtc gtatgatcgc ccatgcgcac
     1921 cttccatatc gactcccagc tccgccaata gggtgggatg gcattgacga atgtcaccag
     1981 gttggagatg ccgaacagat cgacggcaca gacgaatttc tgcggcgtga aggtggcgcc
     2041 gaccagcgcc gagtagccgc cgtagctcgc accgtagatg gcgacccgcg ccggatcggc
     2101 gatgcgctgg gcgatcgccc agtcgacggc gtctataagg tcgtcatgca tcttgcccgc
     2161 ccattcgcgg tcggcggcat tgacgaacga cttgccgaag ccggtcgagc cgcggaaatt
     2221 gacgctgagc acgctatagc cgcgattggc gagccattga tgcgttgtgt tgaagtcggg
     2281 gaagtcgcga ccccacggcc cgccatggac cagcagcacc atcggccccg gtcggccggc
     2341 cgccgcctcg cgcggctgcg acaggtagca gacgagtttt agcccgtcgc gcgcgctcac
     2401 gacgagcggc cgcagcggca ccaaaggcgc gctctcgagc gccggccggc tcgagaacag
     2461 ccggcgcacg cgtccgcttg agcgttcgta gtggatgtaa cgtccgggcg cgccggcggg
     2521 ctcgacatag ccgatccagt tgccgcgatc gttcgacgtg ccgaaccagg cgagctcgcc
     2581 ctcacccgac gtgaccatcc gctcgaggtc gccgctcgcc gcgggatcga gcgtctgcca
     2641 gcgccgcttg gtgtagacga ccggcgcggc gatcggcacg cggctcaccg gatcgagcaa
     2701 gggctcggcg aaatcggcct cggcgtcctc ggccatgacg ctcagccggc cgctctcgag
     2761 gtcctgcgcc acgatggcag cgcggtcgcg gtccttcgaa tcgcgccaat agagcgtgcg
     2821 gccgtcgtcg gatatttcga tcggctgggt ggtgaaggtg tcggctgcct cgatgcgcct
     2881 gaacaacgag ccggtgtctt cgccgcccac cttgaccatg tcgaagccgc cgtcggggcg
     2941 gtagcgcacg ccccaaggca cgcggaactg tgggtcgctg aacatccagg cgaaggcgtc
     3001 attgcgctgc agcagcgtgc tctcgccggt cgcgacgttg atgcgataga tgtcggagta
     3061 gcgcttgtcg cgctgattgt gggcgatcag catctcgccc ggaaaatgcg ccgacacctg
     3121 ctggacgtag gacttgacgc cgggtcccgg cgtcagcgcg cggatctcgc cggtcgcgat
     3181 gtcgacgcgg tgggcctgcc agttctcgtc accgccctgc tcgcggaaga acacgacgtg
     3241 gcgattgtcg tgcggccacc acagctggta ctggacatcg cggtcggtga tgcgcgtcag
     3301 cggccgcgcc gccgccgggt cgccgaccgg cgccagccag acgttcagca cgccatcgac
     3361 cgggcccagg aaggcgatga gcttgccgtc ggggctgatg gtgacgcgcg cgcgctcggg
     3421 cccggcgaac agcagccggc gcgggatcag cgacggcgcc ggctgggccg aaacgccgtg
     3481 cgtcgacgcg gccaagctgc cggccaggat gaagccgcgc cgccccaaac gaatgcgcgt
     3541 catgacgggt ccccctgcga tcggcggaag actagcgccg gagcctcaca tgaggaagaa
     3601 catcgcgatg gcggcagccg ccatgatggc cgtcgccgcc cagcccagca cgcgttgcca
     3661 gcgcgcggcg acgaactcgc ccatcagctt gcgccggctg gccacgacca tcatcgccgc
     3721 catgatcggc acgacgatga cgccgttcac caccgcgctc cacaccagcg ccttgatcgg
     3781 gtctagcccc atgaagtcga cggcgatgcc gacgacgatg gcgagcgcga tcacgaggta
     3841 gaacggccgc gcctcgttca gcggccgctc cagcccggtg cgccagccgc gcgcctcgcc
     3901 caccgcatag gccacggagc ccgcgagaac cggaacggcc agcagcccgg tgccgatcag
     3961 gccgaggctg aacagcacga acgccgcgtc gcccgcgatc ggccgtagcg cttcggcggc
     4021 ctgctcggcc gactggatgt cggtcttgcc cgccgcgtgc agggtcaccg ccgtcgtcag
     4081 gatgatgaag aaggcgatca ggttggagat cgccatgccg gcccaggttt cccagccgat
     4141 gcgattgagc tcgtgatccg cctgctccgg tcgatcgatc agcggaccgg cctcggggtc
     4201 ggcctcctcg tcctcgactt cctgcgagca ctgccagaag aagagatagg ggctgatggt
     4261 ggtgccgaat atcgccacga ccagggtgag cgcctctccg gaaagctcga acttcggcac
     4321 cagcgcccct accgccaccg cctgccaatc gatcttcacc gtgaacacca cgccgacata
     4381 ggccagcagc gagaaggtga accacttcag caggccgaca tagcggtggt agggaatgaa
     4441 tacgaccgcc agcagcgaga agagcgcgaa gccaaacgtg tagacgtgcg ggctgcccca
     4501 gcccaacatc agccgtaccg cggcgcccat ggcggcgagg tcggcgccga gattgatggt
     4561 gttggcgatg aacagcagca gcaccagtgt ggtcacgacg ctgggcggga acaccagcgc
     4621 gaagttgccg gcgagtcccc ggccggtgac cctgccgata cgcgcgctga tggactgaac
     4681 cgccaccatc agcggccagg tcagcaccac ggtccacaag aggttgaagc cagcctgcgc
     4741 gccggcctgc gaataggtgg cgatgccgct tggatcgtcg tcggccgcgc cggtgatcac
     4801 gcccggcccc agcttcttga acagtgtctc gagactaagc cgttcgccga ggcgggattg
     4861 cgcgacgctc atgacagggt gcgaaacggc tgcggaccgt cgaaggttcc gatgtagctc
     4921 acatgcgtga tcaggccggt gccggggcgc cacagatgca gcgcgaggcc cggcggttcc
     4981 atcatcatcg acagcgttgc gccgtcgtgc aggtcgagcg tcgcctgatg ggccgtgctg
     5041 ggcgcaatcg acgccatggc gccggcccat cgcatttgaa tcggccgatg gacatggccg
     5101 cacatcaggc gctcgacgtt gtcgtgacgg cgaacgagct ccgccagccg cgcgtcgccc
     5161 tggctcagtc gcgaattgtc gaacgcggcg atgccgcagt cgaacggcgg gtgatgcatg
     5221 aagaggacgg tcggccggtc gctttcgtcc aaccgcgcct ccagccagtc gagccgttcg
     5281 gcgcagagct cgccgtgcgg cttgccgggc accagggtat cgagcgcgat caggcgcacc
     5341 ggcagatttt cgatcgtgta ttgcaggaag ccggtcggcg gcagataggc gtggtcgggg
     5401 aaggcctcgc gtaacgcatc gcgcgcgtca tggttgccgg gaatcaaatg gaccggcatg
     5461 gcgagcggcg ccagcagccg ccggagatgg gcgtattcct ctgatttgcc gccatcgacc
     5521 aggtcgccgg tggcgagcac gatgtcgggt cgcggatcga gcgcattcac atgcgccacc
     5581 gcccgctcca ggaagccggc cgtgtcgatg cggcggtaga gcagcttgcc ctccgccttg
     5641 acgtgcatgt cggagatctg ggcgatcagc atggcgttcc ctccgtcatc ctgagcgtag
     5701 cgaaggatct catcgccatc tccatcggca cgcttgttga agcggcatga gatccttcgc
     5761 ttcggtcagg atgacaatta cccacgaaag ccgttcacga tcggataacg ccgctccttg
     5821 ctgatcaggc gcgaggtaat cttcaccccg ggcggcgcct ggcggcgctt gtactcggcg
     5881 ctttcgagca ggcgccacac acggttgacg gttgcgagat cgtggccttc ggcggcgagc
     5941 tcctcggcgc cgaggtcgcg ctcgatcagg cccttcagga tggcgtcgag caccggatag
     6001 ggcggcagcg aatcctc
//
LOCUS       DASWGA010000863         1809 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1496243, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000863 DASWGA010000000
VERSION     DASWGA010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1809
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1496243"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VF991_20000"
     CDS             <1..256
                     /locus_tag="VF991_20000"
                     /inference="COORDINATES: protein motif:HMM:NF024965.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEX9558788.1"
                     /translation="RRVIVKSGQNGPAKVFIGTPLDSALFKDLTLTKATFANVSLAGA
                     KFDDIDFSNTVITSNCNFAGMQIAGVGVKELFAAYEQRRR"
     gene            complement(444..1244)
                     /locus_tag="VF991_20005"
     CDS             complement(444..1244)
                     /locus_tag="VF991_20005"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9558789.1"
                     /translation="MNRLPALLVLLMLVLGLGAPAQAQDRIGVIFLHGKQGSPQKTQG
                     LGVITSSLESAGAKVVTPTMAWSAGGWDNINLTVEQVFAQLDAQAAALRSQGAGRIVV
                     GGHSLGAAVALAYAVARGNLAGLVMVGPGHQPAGAYRSNASIHAAVDRARALVEQGRG
                     NDSFSGPDSNQGTTFTVSTTAAAYYSWMNPDGLASMHVQAPRLPATTPLLLVIGRKDP
                     FFERAESLVYRPAAKNPYSKYVVVEADHVQTPFVAAKQISDWILGLPR"
     gene            complement(1289..>1809)
                     /locus_tag="VF991_20010"
     CDS             complement(1289..>1809)
                     /locus_tag="VF991_20010"
                     /inference="COORDINATES: protein motif:HMM:NF044751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558790.1"
                     /translation="GLLASYESERRPVGYRNRLASERHTGVRLKIAELYQNERDPDAL
                     ARGIAALGNAENESWGIEFGYRYDGIEGDPVTYEPTTAPGARLPSTFLADGSALYDRL
                     GPWFTLLVFGGADPSALIDSAPAPLDTVMVDDPVAPIYQAKLVLVRPDTHVAWRGNAC
                     ADGRAVWKKVLA"
BASE COUNT          297 a          588 c          630 g          294 t
ORIGIN      
        1 ccgccgtgtg atcgtcaagt ccgggcagaa cggccccgcc aaggtcttca tcggcacgcc
       61 gctcgacagc gccctcttca aggacctgac gctcaccaag gcgacattcg ccaatgtgag
      121 cctggccggg gcgaaattcg acgacatcga cttcagcaac acggtcatca cgtcgaactg
      181 caatttcgcc ggcatgcaga tcgcgggcgt cggcgtcaaa gagctctttg ccgcctatga
      241 acaacgcagg cgataaggtg ctcccgtcat cccgaccgga gcgaagcgga gtggagggac
      301 ctcctctttg tcgggcacat ggggaggtcc ctccacttcg cctcgtggag tttaccccga
      361 gggtttccga ggggctcggc ttcggtcggg atgacgggtg gttggtcacg ccggcacctt
      421 cttccggacc atgcgcctgt cgctcaacgc ggcaggccaa ggatccagtc cgagatctgc
      481 ttggccgcga cgaacggcgt ctggacatgg tcggcttcga ccacgacgta cttgctgtag
      541 gggttcttgg cggcaggccg atagaccagg ctctcggcgc gctcgaaaaa aggatccttg
      601 cggccgatca ccagcaggag cggcgtggtc gcgggcaggc gcggcgcctg cacgtgcatc
      661 gacgccaggc cgtcgggatt catccacgaa tagtaggccg ccgccgtcgt cgagacggtg
      721 aacgtggtgc cctggttgct gtcgggcccg ctgaacgaat cgttgccgcg gccctgctcg
      781 accaaggcgc gggcgcggtc gaccgcggcg tggatcgagg cgttactgcg ataggcgccg
      841 gcgggttgat ggccgggccc gaccatgacc aggccggcga gattgccgcg cgccacggca
      901 taggccagtg ccacggcggc gccgaggctg tggccgccga cgacgatgcg gccggcaccc
      961 tggctgcgca gggcagcggc ctgggcgtcg agctgggcga acacctgctc gaccgtgagg
     1021 ttgatgttgt cccagccgcc ggccgaccag gccatggtcg gcgtgacgac cttcgcgccg
     1081 gcgctctcga gcgaggaggt gatcacgccc agcccttgcg tcttctgcgg cgaaccctgc
     1141 ttgccatgca ggaagatgac gccgatgcga tcctgcgcct gcgccggcgc gccgaggccg
     1201 aggaccaaca tcaagagaac aagcagtgcc ggtagccgat tcatgcacac ctctcctttc
     1261 gatgctctct tgaaccgcaa gaacatgctt acgccaagac ctttttccaa accgcgcgac
     1321 cgtcggcgca ggcgttgccg cgccaggcga cgtgggtgtc ggggcgcacc agcacgagct
     1381 tggcctggta gatcggcgcg accgggtcgt cgaccatgac ggtgtcgagc ggcgccggcg
     1441 ctgaatcgat caaggccgac ggatcggcgc cgccgaagac cagcagggtg aaccaggggc
     1501 cgagcctgtc gtagagggca gagccgtccg ccaagaaggt gctgggcaga cgcgcgcccg
     1561 gcgccgtcgt cggctcgtac gtcacgggat cgccctcgat gccgtcgtag cgatagccga
     1621 actcgatgcc ccagctctcg ttctcggcat tgcccagggc ggcgatgccg cgcgccaggg
     1681 cgtcggggtc gcgttcgttc tggtagagct cggcgatttt caggcgcacg ccggtgtggc
     1741 gttccgaggc gaggcgattg cgatagccga ccgggcgtcg ctcgctttcg taggaggcga
     1801 gcaggcccg
//
LOCUS       DASWGA010000864         5586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1112847, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000864 DASWGA010000000
VERSION     DASWGA010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5586
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1112847"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /locus_tag="VF991_20015"
     CDS             <1..507
                     /locus_tag="VF991_20015"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9558791.1"
                     /translation="KVEQIDLPQLDELPAINAKGGFAASESYAWHKDLLARRGNEYDS
                     LVAPRIRRGADMSAADYIELLGKRADLQKRVAAVTSNYDAVAMPTCAITAPTLDEVST
                     PEGFTKKNMLLLRNTTVGNFLDRCAISLPCHASGELPVGFMLMGEAMADKRVLAMARS
                     VAPVVKPP"
     gene            complement(619..1254)
                     /locus_tag="VF991_20020"
     CDS             complement(619..1254)
                     /locus_tag="VF991_20020"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018427749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEX9558792.1"
                     /translation="MFYDAAKRDHGLGQDPLKSLIVPRPIGWISTVDRQGRINLAPYS
                     FYNGVSEYPPMVYFAITGTYGDTPTKHSRMNAESTGEFVVNMVSENLKEQMNVTTTMV
                     AFGVDELKLAGLTAASCRLVKPPRVKESPVALECKYWRTIELPVEKGHEAKRGSVVFG
                     QVVGVHIDDSIIKDRRIDTLAFKPVARLGYSEYTTTDNVWRMRRPDDPRYQ"
     gene            1344..1922
                     /locus_tag="VF991_20025"
     CDS             1344..1922
                     /locus_tag="VF991_20025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEX9558793.1"
                     /translation="MSRTMKALLAVWIAALAAAAGWIGWDAFHGDRPAIGGPFALTDQ
                     DGRTVTSDSLKGKPTLIYFGFTYCPDVCPTSLLLMETAIEKLGPDAAKKVNLVFITVD
                     PERDTPKLLKGYVENFGPTFIGLTGTPQQIADVARAYRVYYQKVPGKDGGPYLMDHSS
                     IVYLLDRNGRFVTHFTHEAKAEAIAASVGRLL"
     gene            2008..3243
                     /gene="phaZ"
                     /locus_tag="VF991_20030"
     CDS             2008..3243
                     /gene="phaZ"
                     /locus_tag="VF991_20030"
                     /inference="COORDINATES: protein motif:HMM:TIGR01849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HEX9558794.1"
                     /translation="MLYYAYELQRQLAKPVRIWANTLEQVYSSPYNPLSDTWFGKSVA
                     ASAEIVARLTQNYGKPAFGLKTTQVGNETAAVNEEILLRKPFCQLLHFHRDHFHLGNG
                     RRDPKVLVVAPMSGHFATLLRGTVEALLPEHDVYITDWVDAREVGLSQGNFDLDDYID
                     YVIEFCRYIGPDLHVIAVCQPSVPVLAAAALMAEAKDRRQPRSITLMGGPIDSRVSPT
                     TPNDLAMRNSMMWFRQNVISTVPLNYPGALRRVYPGFLQLTSFISMNLDRHINAHMRQ
                     FEYLVKGDDDNADSHRAFYDEYLAVMDLTAEFYLQTVEVVFKEHLLPRGEWVSRGRKV
                     DPAAIETALMTVEGELDDISGIGQTKAAHALTPNIPGARHVHWEQPRVGHYGIFNGRK
                     WREQILPRVRDFIRDNDAH"
     gene            3294..4106
                     /locus_tag="VF991_20035"
     CDS             3294..4106
                     /locus_tag="VF991_20035"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEX9558795.1"
                     /translation="MDLEAQWSHAANVAVTVVTTYGLRVIGAIIILVVGWIASRLLYR
                     AVVRVCERSPHIDRTVVLFLGNGVRYTALVITFVAVLTTFGIATTSFVAVLGALGIAI
                     GLALQGTLSNLAAGIMLVLFRPFHVGDRIETGGVSGTTRVINLFYTEIDSDDKARIVI
                     PNGKLWGEIVRVPSQGDTARIDLRYPRPANDDVGAAIARLKELIQRDKRVLGVAAIGV
                     ESIGDGTYTLAAQALVSRSEEVAVRFDLNRTVKEEFERRAPKAPTAVERRAG"
     gene            4123..4989
                     /locus_tag="VF991_20040"
     CDS             4123..4989
                     /locus_tag="VF991_20040"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX9558796.1"
                     /translation="MDTALKVPVEIAEWKSAPFDLAGETVFAVGDVHGCAEELRALLG
                     TIGELAKESCNHKRLIYLGDLINRGPDSIGVLDLWAHDEAAHGVDHIDRLMGNHEIMM
                     LLAAIGGPHAHKAETMWLSKRMGGQVLLDQMRAQAGQPAARATLALLEASLGDQVMHR
                     LYAMRSHVRLGNTLFVHGGLDPHADLDEFLTRPWTLFTEARWAWINHGFLDWRGGFHG
                     TLVVHGHTPPDKHKAISGMDDPHLFEGDRLGLDGGSARTGIVTAAEITDGRYRVLKAG
                     IPFEHPVSSAEE"
     gene            complement(5003..>5586)
                     /locus_tag="VF991_20045"
     CDS             complement(5003..>5586)
                     /locus_tag="VF991_20045"
                     /inference="COORDINATES: protein motif:HMM:NF020939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043138 - 3'-5' DNA helicase activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RQC domain-containing protein"
                     /protein_id="HEX9558797.1"
                     /translation="RTGERFGVEHLVAILLGERTDNVVKFNHDRLPTFGVGRDRKPAE
                     WRSIFRQLSATGLIAQDLMEHGRWWVTDQGRLVLKGQARIELRTALASSAAGKSTRRD
                     KRAATPSAIVGDADAALLEALKTLRTKLAQAQKVPAYIVFSDRTLAELATHRPSSPRA
                     MREIHGVGDAKLERYGAAFLEVIRGGAKDGVAS"
BASE COUNT          983 a         1893 c         1734 g          976 t
ORIGIN      
        1 aaggtcgagc agatcgacct gccccagctc gacgaactgc cggccatcaa cgccaagggc
       61 ggcttcgccg cctccgaatc ctacgcctgg cataaggacc tgctggcacg ccgcggcaac
      121 gagtacgact cgttggtagc gccgcgcatt cgccgaggcg ccgacatgag cgccgccgac
      181 tacatcgagc ttttaggcaa gcgggccgac ttgcagaagc gcgtggcggc agtcacgtcg
      241 aactacgacg ccgtggccat gccgacctgc gccatcacgg caccgaccct cgacgaggtt
      301 tccacgcccg agggcttcac caagaagaac atgctgctgc tgcgcaacac cacggttggc
      361 aattttttag accgctgcgc catcagcctg ccctgtcacg cgtcaggcga attgccggtg
      421 ggcttcatgc tgatgggcga ggcgatggcc gacaagcgcg tgctggcgat ggcgcgctcg
      481 gtggcgcctg tcgtgaagcc tccgtgactc atgttccttt cctcgcttgg gagaggctag
      541 gtgagggggc tctcaaaatc tcgtgcaacc ccctcaccca acctctcccc ctatcggggg
      601 agaggagtcc gaaggacatc actgatagcg aggatcgtcg ggccgacgca tgcgccagac
      661 gttgtccgtc gtggtgtatt cgctataacc cagccgcgcg accggcttga aggccagggt
      721 gtcgatgcgg cgatccttga tgatgctgtc gtcgatatgc acgcccacca cctggccgaa
      781 caccaccgag ccgcgcttgg cctcgtgacc cttctcgacc ggcaattcga tggtgcgcca
      841 gtacttgcac tccagcgcca ccggcgattc cttgaccctc ggcggcttca cgagacggca
      901 ggatgcggcg gtaaggcccg ccagtttcag ctcatcgacg ccgaacgcca ccatcgtggt
      961 ggtgacgttc atctgctcct tgaggttttc gctcaccatg ttgaccacga actcacccgt
     1021 cgattcggcg ttcatgcggc tgtgcttggt cggcgtgtcg ccgtaggtgc cggtgatggc
     1081 gaaatagacc atgggcgggt attcgctgac gccgttgtag aagctgtagg gtgcgagatt
     1141 gatcctgccc tgacggtcga ccgtcgagat ccagccgatc ggccgcggca cgatcagcga
     1201 cttcagcgga tcctggccaa gcccgtggtc gcgcttggca gcgtcgtaga acatcgtctt
     1261 ctccttgggg cgttcatcaa ctcctgttgt gcgaccagtg gtccggcttg tcgagccgcc
     1321 ggctgcggcc catgttcgga tccatgtcac gtaccatgaa ggcgctgttg gcggtgtgga
     1381 tcgcagccct cgccgccgcc gccggctgga tcggctggga tgcctttcac ggcgaccggc
     1441 cggcgatcgg tgggcccttt gcgctgaccg accaggatgg ccgcaccgtc accagcgaca
     1501 gcctcaaggg caagccgacc ttgatctatt tcggcttcac ctattgcccc gacgtctgcc
     1561 cgacttcgct gctgctgatg gagacggcga tcgagaagct gggaccggac gcggccaaga
     1621 aggtgaacct ggttttcatc accgtcgatc ccgagcgcga tacgcccaag ctgctcaagg
     1681 gctatgtcga gaatttcggc cccaccttca tcggcttgac cggcacgccg cagcagatcg
     1741 ccgacgtcgc acgcgcctat cgcgtctact accagaaagt gccgggcaag gatggcgggc
     1801 cttacctgat ggaccattcc tcgatcgttt acctgctcga ccgcaacggc cggttcgtca
     1861 cccatttcac ccatgaggcc aaagccgagg cgatcgcggc ttctgtggga cggttgctat
     1921 agtctcaaat aagccactga aatcccacga tttgtgcacc gcggaatagg gtgacaagca
     1981 ccccgcgatg cgtacaatcc gcggcccatg ctttattacg cctacgaact ccagcgccaa
     2041 ctcgccaagc cggtccgcat ctgggccaac acgctggagc aggtctattc cagtccctac
     2101 aacccgctgt ccgacacctg gttcggcaag tcggtcgccg ccagcgcgga gatcgtggcg
     2161 cgcctcaccc agaactacgg caagcccgcc ttcggactga agacgaccca ggtcggcaac
     2221 gagaccgccg cggtcaacga ggaaatcctt ttacgcaagc cgttctgcca gctcctgcac
     2281 ttccatcgcg accattttca tctcggaaat gggcgacgcg atcccaaggt gctggtcgta
     2341 gcgccgatga gcgggcactt cgccaccctg ctgcgcggca cggtcgaagc gctgttgccc
     2401 gagcacgacg tgtacatcac cgactgggtc gacgcccgcg aggtcgggtt gtcccaaggc
     2461 aacttcgacc tcgacgacta tatcgactac gtcatcgagt tctgtcgcta tatcggcccc
     2521 gatctgcacg tcatcgccgt ctgccagccc tcggtgccgg tcctcgccgc ggccgcgctg
     2581 atggccgaag ccaaggaccg gcgccagccc aggtcgatca ccctgatggg cggcccgatc
     2641 gatagccgag tcagcccgac cacgcccaat gatctggcga tgcgcaactc gatgatgtgg
     2701 tttcgccaga acgtgatctc gacagtgccg ctcaactatc cgggcgcgct gcgccgggtc
     2761 tatccgggct tcctccagct cacgtccttc atcagcatga atctcgaccg gcacatcaac
     2821 gcccacatgc gccagttcga atacctggtc aaaggcgacg acgacaacgc cgactcccac
     2881 cgcgccttct acgacgaata tctcgccgtc atggacctca cggccgagtt ctacctgcag
     2941 accgtcgagg tcgtgttcaa ggaacacctg ttgccgcgcg gcgaatgggt gagccgcggc
     3001 cgcaaggtcg atcccgccgc catcgagacc gccctgatga cggtcgaggg cgaactcgac
     3061 gacatttccg gcatcggcca gacaaaggcc gcccatgcgt tgacgcccaa catcccgggc
     3121 gcccgccacg tccattggga gcaaccgcgc gtcggccatt acggcatctt caacggtcgc
     3181 aagtggcgcg agcagatcct gcccagggtt cgcgacttca tccgcgacaa cgacgcgcac
     3241 tgaagcccgc cccgccccgc aactcctaag cgtggcggca cgttggtacc gtcatggacc
     3301 tcgaagccca atggagccac gcggccaacg tggccgtgac cgtggtcacc acctatggcc
     3361 tgcgcgtcat cggagccatc atcatcctgg tggtgggctg gatcgcctcg cgtctgcttt
     3421 atagggcggt ggtgcgggtt tgcgagagat cgccgcatat cgaccgcacc gtggtgctct
     3481 tcctgggcaa cggcgtgcga tacaccgcgc tggtcatcac ctttgtcgcc gtgctgacca
     3541 ccttcggcat tgccaccacg agcttcgtgg ccgtgctggg cgcgctcggc atcgccatcg
     3601 ggttagccct gcagggcacg ctcagcaacc ttgccgccgg catcatgctg gtgttgttcc
     3661 ggccgttcca tgtcggcgat cgcatcgaga ccggcggcgt ctcaggcacg acgcgggtga
     3721 tcaacctctt ctacaccgag atcgacagcg acgacaaagc ccgcatcgtc atccccaacg
     3781 gcaagctgtg gggcgagatc gttcgcgtgc cgagccaagg cgacacggca cgcatcgact
     3841 tgcgttatcc gcgtccagcc aacgacgatg tcggcgcggc gatcgcccgc ctgaaggagc
     3901 tgatccagcg cgacaagcgg gtgctcggcg tggcggcgat cggcgtcgaa tcgatcggcg
     3961 acggcaccta cacgctggcg gctcaggctc tcgtctcccg gtccgaagaa gtggcggttc
     4021 gcttcgacct caatcgcacg gtgaaggagg agttcgaacg ccgcgctccc aaggccccga
     4081 cggcggtgga gcgccgcgcc ggatagcgct agcatcgcgg ccatggatac cgccctgaaa
     4141 gttccagtgg aaatcgccga gtggaagtcc gcgcccttcg accttgccgg cgaaacagtg
     4201 ttcgccgtcg gcgacgtgca tggctgcgcc gaagagttgc gcgccctcct cggcacgatc
     4261 ggcgagctgg cgaaggaaag ctgcaaccac aagcggctga tctatcttgg cgacctgatc
     4321 aaccgcgggc ccgacagcat cggcgtgctc gacctgtggg cccacgacga ggcggctcac
     4381 ggtgtcgacc atatcgaccg gctgatgggc aatcacgaga tcatgatgct gctggccgcg
     4441 atcggtggcc cgcatgccca caaggccgag accatgtggc tcagcaagcg catgggcggc
     4501 caggtgctgc tggaccagat gcgcgcgcaa gccggccagc cggcggcacg tgcaaccctg
     4561 gcgctgctcg aggcgtcgct gggcgatcag gtcatgcatc ggctctacgc catgcgctcc
     4621 cacgtcaggc tgggcaacac gctgttcgtc catggcgggc tcgacccgca tgctgacctc
     4681 gacgagttcc tgacccggcc ctggaccctc ttcaccgagg cgcgctgggc ctggatcaac
     4741 catggcttcc tcgactggag gggcggcttc cacgggacct tggtggtgca cggccatacc
     4801 ccgcccgaca agcacaaggc gatcagcggc atggacgatc cgcacctttt cgagggcgac
     4861 cggctggggc tggacggcgg cagcgcccgc accggcatcg tcaccgccgc ggaaatcacg
     4921 gatggccgct accgcgtcct gaaggccggc attccgttcg agcacccggt ctcgtctgcc
     4981 gaggaatagc ggccgacgag cttcacgacg cgacaccatc cttggcaccg ccccggatca
     5041 cctcgagaaa ggcggcgcca tagcgttcga gcttggcgtc gccgacccca tggatctcgc
     5101 gcatggcgcg cgggcttgac ggccggtggg tggcgagttc ggccagggtg cgatcggaga
     5161 acacgatata ggccggcacc ttctgcgcct gggcgagctt ggtgcgtaac gtcttcaggg
     5221 cctcgagcag ggctgcatcg gcatcgccga cgatggccga aggcgtcgcg gcgcgcttgt
     5281 cgcggcgcgt actcttgccc gccgccgacg acgcgagggc agtgcgcagc tcgatccgcg
     5341 cctggccctt cagcacgagc cggccctggt cagtgaccca ccagcgaccg tgctccatca
     5401 ggtcctgggc aatcaggccg gtggccgaga gctggcggaa gatcgagcgc cattcggccg
     5461 gcttgcggtc ccggccgacg ccgaaggtcg gcaaccggtc atggttgaac ttcaccacgt
     5521 tgtccgtgcg ctcacccaac aggatggcga ccagatgttc cacgccgaag cgctcgccgg
     5581 tgcgca
//
LOCUS       DASWGA010000865         2279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_223994, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000865 DASWGA010000000
VERSION     DASWGA010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223994"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..1245)
                     /locus_tag="VF991_20050"
     CDS             complement(238..1245)
                     /locus_tag="VF991_20050"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003960 - NADPH:quinone reductase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase family protein"
                     /protein_id="HEX9558798.1"
                     /translation="MRAVVCDRLGDPSVLKIEERPIPQPGPADVLIKVGAASVNFPDV
                     LMLSAGYQHKPELPFVPGMEGAGTIEAVGVEVKNWRVGDRVIFGVRPGAFAEYVRLPA
                     TGNLMHTPAGWSDAEAAAFRVGATTAYHSLVHRARLKPREILLVHGASGGVGLAAVQL
                     GKHLGARVIATGSDDARLAVVSDNGADLVINYRTDDFVSVVKGVTDGHGADVVYDPVG
                     GEVLEKSLRAAAYGARLLVVGFASGGPTKIMSNHVLIKGLSILGVRAGETVRRQSPEL
                     GQDYASELPRLAALGVMRPHISHRFPMERAADAFRALIDRKVVGKAVIEMTAQRSSRA
                     G"
     gene            complement(1377..>2279)
                     /locus_tag="VF991_20055"
     CDS             complement(1377..>2279)
                     /locus_tag="VF991_20055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011976109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9558799.1"
                     /translation="LNCVANGKLLRERLFDGIWVQPAAGDAGGAVGAAFAAYHGYLGQ
                     ARQLNGHLDGMAGSYLGPEYSDDEIAQRLTAAGAKLIRLPREKTIEHTAQALADSKAV
                     GWMQGRMEFGPRALGGRSILGDARSPTMQKTLNLKVKYRESFRPFAPAVLREDVSDYF
                     DIKTDSPYMLMVAPVVEKRRRAMNEAEQALFGIDKLNVPRSDIPAVTHVDYSARIQTV
                     HKETNPAFHDLLESFKAKTGCAVLVNTSFNVRGEPIVCTPEDAFRCFMGSEIEVLVVG
                     NCFLRKEDQDPALKLDYKNAFELD"
BASE COUNT          373 a          762 c          765 g          379 t
ORIGIN      
        1 cgcgcacagg ccgtggcggc cgagctggtc caggctggtt atccggccaa cgacatcgtg
       61 atcgccgccg accccgaagc cttcggcaat ctcagtctgg gcgtctccga cgcccaggag
      121 agggaccggc gcgtgacgat cgtgttttcg cgctagtctg tcgtcctgag cctagcgaag
      181 gacctcatcg ccgcttgtca cgggcataag atccttcgct tcgcttcagc gcgggggtta
      241 ccccgcgcgc gatgaccgct gcgcggtcat ctcgatcacc gccttgccga cgaccttgcg
      301 gtcgatcagc gcgcggaagg catcggccgc gcgctccatc ggaaagcgat gcgaaatgtg
      361 cggtcgcatg acgccgagcg cagcaaggcg cggcagttcg ctggcgtagt cctgcccgag
      421 ctcgggcgac tggcgtcgca cggtctcgcc ggcgcgcacg cccaggatcg acaggccctt
      481 gatcagcaca tggttggaca tgatcttggt cgggccgccc gacgcgaaac ccacgaccaa
      541 gagccgcgcg ccgtaggcgg ccgcgcgcag ggatttttcc aaaacctcgc cgcccaccgg
      601 atcgtagacc acgtcggcgc catggccgtc ggtcacgcct ttgacgaccg acacgaagtc
      661 gtcggtccgg tagttgatca ccaggtcggc gccgttgtcg ctgaccacgg caagacgggc
      721 atcgtcgctg ccggtggcga tcacccgcgc gccgagatgc ttaccgagct gcacggcggc
      781 caggccgacg ccgcccgatg cgccgtgcac cagcaagatc tcgcgcggct tgagtcgggc
      841 gcgatggacc agcgaatggt aggcggtcgt cgcaccgacg cgaaaggccg cagcctcggc
      901 gtcggaccag ccggccggcg tgtgcatcag gttgccggtc gccggcaggc gcacgtattc
      961 cgcgaaagcg ccgggccgca cgccgaagat cacgcgatcg ccgacccgcc agttcttcac
     1021 ctcgacgccg accgcctcga tcgtgccggc cccttccatg cccggcacga agggcagctc
     1081 cggcttgtgc tggtagccgg cggacagcat caggacatcg ggaaagttga ccgaggccgc
     1141 accgaccttg atcagcacgt cggccggccc gggctggggg atcggccgct cctcgatctt
     1201 caggaccgac ggatcgccca ggcgatcgca gacgacggcg cgcacggtgc aggagcctta
     1261 gtgcgtgctg tcatcctgag tcgcgcggat cagatccgcg cttaagcgaa ggatctcatg
     1321 ccggtggcaa gcggcgatga ggtccttcgc tgcgctcagg acgacaagag cgtacactag
     1381 tcgagctcga aggcgttctt gtagtcgagc ttcagcgccg gatcctggtc ttccttgcgg
     1441 aggaagcagt tgccgaccac cagcacctcg atctcgctgc ccatgaagca gcggaaggcg
     1501 tcctccggcg tgcacacgat cggctcgccg cgcacgttga acgaggtgtt caccaggacc
     1561 gcgcagccgg tcttggcctt gaacgattcc aggagatcgt gaaaggccgg gttggtctcc
     1621 ttgtgcacgg tctggatgcg cgccgaatag tcgacatggg tcaccgccgg gatgtcggag
     1681 cgcggcacgt tcagcttgtc gatgccgaac agcgcctgtt cggcctcatt catggcgcgg
     1741 cggcgcttct ccaccaccgg cgctaccatc agcatgtagg ggctgtcggt cttgatgtcg
     1801 aaatagtccg agacgtcctc gcgcaacacc gccggcgcga agggccggaa ggactcgcgg
     1861 tatttgacct tgagattgag cgtcttctgc atggtgggcg agcgtgcgtc gcccaggatc
     1921 gagcggccgc ccagcgccct cggtccgaat tccatgcggc cctgcatcca gccgaccgcc
     1981 ttggagtcgg ctaaggcctg ggccgtgtgc tcgatcgtct tctcgcgcgg caagcggatg
     2041 agcttggcgc cggctgcagt aagacgctgg gcgatctcgt cgtcggaata ttccgggccg
     2101 agatagctgc cggccatgcc gtcgagatgg ccgttgagct ggcgcgcctg gccgagatag
     2161 ccgtgatagg cggcgaaggc cgcgccgacc gcgccgccgg catcgccggc cgccggctgc
     2221 acccagatgc cgtcgaacag cctttcgcgc aatagcttgc cgttggcgac gcagttcag
//
LOCUS       DASWGA010000866         2735 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_739116, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000866 DASWGA010000000
VERSION     DASWGA010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_739116"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VF991_20060"
     CDS             complement(<1..197)
                     /locus_tag="VF991_20060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEX9558800.1"
                     /translation="MIDRRALLKQSGAALATLGAASIFDPLRAFAGTVKLPFENGERP
                     LVKYPQKRPMIGLTSRPPQLET"
     gene            complement(247..1038)
                     /locus_tag="VF991_20065"
     CDS             complement(247..1038)
                     /locus_tag="VF991_20065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011974521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9558801.1"
                     /translation="MLGRARFAIAVLAFGYAFLYLPIALVIAYSFNESRLVTVWAGFS
                     TKWWSALFANEAMLSAAWLSLRIAVVSATAAALLGLAAGYVLARVPSFFGRTLFGSLV
                     IAPMVMPEVVMGISMLLLFVGSERLLGGPERGFLTIAIAHTTFSIAFVAIVVQARLAD
                     FDRSLEEAAMDLGATPWVTFLTITLPLIAPAVGSGWLLAFTLSLDDLILTQFVAGAQS
                     QTLPMRVYSSVRLGVDPQINVLATVIMAIAASALILSGWLTRRRA"
     gene            complement(1038..1901)
                     /locus_tag="VF991_20070"
     CDS             complement(1038..1901)
                     /locus_tag="VF991_20070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9558802.1"
                     /translation="MSRRALSLGMRFVIALPYAWLVVFFLLPFALVLAIALGTNAPDS
                     APPVELGLSLANFALLFTDTLYIGAWLASIRIAATATLVALLLGYPMAYAVARAEPRR
                     RPLLLMLVILPFWTSFLIRVYAWMGLLAENGNLNQFLRWTGLVEDPGTILGTEWAILL
                     GMVYAYLPFMVLPLYAALEKLDVGLLEAAADLGARPFAAFLTVTLPLSRPGIAAGCLL
                     VFIPAVGEFVIPDLLGGTGALMIGKVLWDEFFTNSDGPLASAMAIWLLVLLVGPIALF
                     QRQQARSLERR"
     gene            complement(1894..>2735)
                     /locus_tag="VF991_20075"
     CDS             complement(1894..>2735)
                     /locus_tag="VF991_20075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558803.1"
                     /translation="GFEMPDAGRVVIDGQDMTGVPPHRRPVNMMFQSYALFPHMNVAE
                     NVGYGLRREGMAKPEIGRRVAEALEQVRLSDYAARRPAQLSGGQRQRVALARALVKRP
                     KLLLLDEPLAALDRKLREGTRFEMVRLQEELGLTFVMVTHDQEEAMSMASRLAVMDLG
                     RIVQVGTPHDVYERPRSRFVAGFIGIANILPLDGGKRWLALRPEKIGLFAARPSTEQA
                     EAGRIVDVAYEGDRSLYRVATDDGSMLLVATANVAREGGSWQRGQDVWLGWSADAGHE
                     LDE"
BASE COUNT          509 a          895 c          974 g          357 t
ORIGIN      
        1 gtttcgagtt gtggtggccg gctggtcaac ccgatcatcg gccgcttttg cgggtacttc
       61 acgagcggtc gctcgccgtt ctcgaagggc aacttgaccg taccggcaaa cgcgcgcagc
      121 ggatcgaaga tcgaggctgc gccaagcgtc gccagggcgg cgccggactg cttgagcagg
      181 gctcttctgt cgatcatggc tgcttcctcc cgggctcttc catttttgga tgacgcccac
      241 gatagcctaa gccctgcgtc gcgtcagcca gccggaaaga atcagggcgg aggcagcgat
      301 cgccatgatg acggtggcga gcacgttgat ctgcgggtcg acgcccagcc gcacgctgga
      361 atagacccgc atcggcaggg tctgcgactg cgcgccggcg acgaactggg tcaggatgag
      421 atcgtccagc gacaaggtga aggcaagcag ccagcccgaa ccgaccgccg gcgcgatcag
      481 cggtaacgtt atggtgagga aggtgaccca cggggtggcg ccgaggtcca tcgccgcctc
      541 ctcgagcgag cggtcgaagt cggcgagtcg cgcctgcacg acgatggcga cgaaggcgat
      601 ggagaaagtc gtgtgggcga tggcgatcgt aaggaagccg cgctcgggcc cgcccagcaa
      661 gcgctcggag ccgacgaaca gcagcagcat ggagatgccc atcaccacct cgggcatcac
      721 catgggggcg atgaccaggc tgccgaacag ggtgcggccg aaaaaggacg gcacgcgtgc
      781 cagcacatag cccgcggcga gaccgagcag cgccgccgcc gtcgcgctca ccacggcgat
      841 gcgcagcgac agccaggcgg cggaaagcat cgcctcgttg gcgaacaagg cgctccacca
      901 tttagtcgag aagcccgccc acaccgtgac caggcgcgat tcgttgaagg agtaggcgat
      961 caccagcgcg atcggcaggt agagaaaggc atagccgaag gccagcacgg cgatagcgaa
     1021 gcgggcgcgg ccgagcatca gcgccgctcc aggcttctcg cctgctggcg ctggaacagg
     1081 gcgatcggcc ccaccagcag caccagcagc cagatcgcca tcgccgaggc gagcggcccg
     1141 tctgaattgg tgaagaactc gtcccacagg accttgccga tcatcagcgc gccggtgccg
     1201 cccaggaggt cggggatcac gaactcgccg accgccggga tgaagaccag caggcagccg
     1261 gccgcgatcc cgggccgcga cagcggcagg gtgacggtga ggaaggcggc gaacggcctg
     1321 gcgccgaggt cggcggccgc ctccagcaag ccgacatcga gcttctccag cgcggcatag
     1381 agcggcagca ccatgaaagg caggtaggcg tagaccatgc cgagcaggat cgcccattcg
     1441 gtgccgagga tggtgccggg atcctcgacc aggccggtcc agcgcaggaa ctggttgagg
     1501 ttgccgttct cggccagcag tcccatccag gcgtagacgc ggatcaggaa ggacgtccag
     1561 aagggcagga tgaccagcat cagcagcagc ggccggcgcc gcggctcggc gcgcgccacg
     1621 gcataggcca tgggatagcc cagcagcagc gcgaccaggg tcgccgtggc ggcgatcctg
     1681 atcgaggcga gccacgcgcc gatgtagaga gtgtcggtga agagcagcgc gaagttggcg
     1741 aggctcaagc cgagctcgac cggcggcgcg gagtccggcg cgttcgtgcc gagcgcgatc
     1801 gccagcacca gcgcaaacgg cagcaggaag aagacgacca gccaggcgta gggcagggcg
     1861 atgacgaagc gcatgccgag actgagggcc cgtctactca tccagctcgt gccctgcgtc
     1921 ggcggaccag ccgagccaga cgtcctgacc gcgctgccag gacccgcctt cacgcgcaac
     1981 attggcggtg gcgaccagca gcatggagcc gtcgtcggtg gcgacgcggt agagcgagcg
     2041 gtcgccttcg taggcgacgt cgacgatgcg gccggcctcg gcctgctcgg tgctgggccg
     2101 cgcggcgaac agtccgatct tctccggccg gagcgccagc cagcgctttc caccgtcgag
     2161 cggaaggatg ttggcgatgc cgatgaagcc cgcgacgaag cgcgagcgcg gccgctcgta
     2221 gacgtcgtgc ggcgtgccga cctggacgat ccggccgaga tccatgacgg caagccggct
     2281 cgccatcgac atggcttctt cctggtcgtg ggtcaccatg acgaaggtga gcccaagctc
     2341 ctcctgcagg cgcaccatct cgaagcgcgt gccctcgcgc agcttgcggt cgagcgccgc
     2401 cagcggctcg tcgagcagca ggagcttggg ccgcttgacc agcgcgcggg cgagcgccac
     2461 gcgctggcgc tggccgcccg agagctgggc cggccggcgc gcggcatagt ccgacaaccg
     2521 cacctgctcc agcgcctcgg cgacgcgccg gccaatctcg ggcttggcca tgccttcgcg
     2581 gcgcaggccg tagcccacgt tctccgccac gttcatgtgc ggaaagaggg cgtaggactg
     2641 gaacatcatg ttgaccggcc ggcgatgggg cggcacgccg gtcatgtcct ggccgtcgat
     2701 gacgacgcga ccggcatcgg gcatttcgaa gcccg
//
LOCUS       DASWGA010000867         3930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2125987, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000867 DASWGA010000000
VERSION     DASWGA010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3930
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2125987"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="VF991_20080"
     CDS             <1..709
                     /locus_tag="VF991_20080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558804.1"
                     /translation="ALALMRQEGRPDDPRALYYLGLHEAQSGDSRAALERWRALEAKS
                     PPNAPYLPMLRAEIERVAKAAGIDLPPSAKSPSREQVEAMQNLAPEQRQQAIRGMVEG
                     LAARLKDNPQDRAGWLRLANAWKVLGENAAATDAYAKADALGPVDARLLADWAEAHVR
                     QLAPGQAPSPESVAVLQRLEKAEPRNALALFYLGAASFAAGDKPAAAQRWKTLLALLP
                     ADAPIRDMLEQRIKEAD"
     gene            932..1081
                     /locus_tag="VF991_20085"
     CDS             932..1081
                     /locus_tag="VF991_20085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558805.1"
                     /translation="MSEATAEPTEGEPKSLEGFEKSPEPDVVPIESFVTDVKVETSDD
                     AIPSS"
     gene            1113..1397
                     /locus_tag="VF991_20090"
     CDS             1113..1397
                     /locus_tag="VF991_20090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558806.1"
                     /translation="MQFEIPDDRYRELETLIKEAGFKSKADFFDNPIALFKWTVKHAK
                     KGNIIAAVDEREHKYIELQMPYLDRVTPQFAYEATVRGSSSSSSGNESAA"
     gene            1394..1873
                     /locus_tag="VF991_20095"
     CDS             1394..1873
                     /locus_tag="VF991_20095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558807.1"
                     /translation="MSGRPSGLEAAVAEGVAKALEGYRKERETVVAEHIVVVVVVQPP
                     APDFRIVAVCVLVVLSPVGVLICFGGNVENHIAAIIGLALAAVAIALTFAFRDVTPLQ
                     RQMLLALFALAGGAIATEIPGFLDIKLTLGEKTAIGAGGALGVFVLLYRFSAAKPPE"
     gene            complement(1894..3696)
                     /locus_tag="VF991_20100"
     CDS             complement(1894..3696)
                     /locus_tag="VF991_20100"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9558808.1"
                     /translation="MARKRTVAIANKDQANRRLVVVVAFDVVGFSALVEADEDKVLAA
                     WRALRREIDPPIVRGGGRIFKSLGDGLLVEFSSPVDATRAALEVQAAVAKMATEPGVR
                     LELRCAIHMGEVTVEGMDLLGDGINVVSRLQDHAPIGGVLVSATVMDLISGRIDQPIE
                     DLGTLQLKNISRPVHAYAVGPGKRPKTAPAIDSFERRRPSIAVLPFVDQSAATADPSA
                     ETANSYFSDGLVEDIISALSCLPELIVISRASVLRYRGTVPDPRQIRRDLDVRYMLTG
                     SVRRAGKKVRLSAELADCESGTAIWSDRFSGEAGDLFELQDELSARVVATIAPQVQES
                     ELRRVQRKHPESLDAYECVLRGLDLLYRFDDDKFMQALPMFERAMTLDPAYATAYALA
                     ATCHGERFYQGESPDPVADTKEAERLSRLALTLDRFDPLALSLCGHIRSWLFHDYDHA
                     IELFDRALAANPSSAIAWLRSSATFSYIGETREARRRADIGLRLSPYDAHVFFSYGLV
                     ALSSYAAGDYADSAQWGRRSMALNPRFVGNIRFLAASLAASGQIDEARQVGQDLLRLN
                     PKFSARRFAEGHAFKDPDKRRLFGEHLIKAGLPE"
BASE COUNT          660 a         1351 c         1289 g          630 t
ORIGIN      
        1 ggccttggcc ctcatgcgcc aagagggccg gcccgacgat ccgcgcgctc tctattatct
       61 cggactgcat gaggcgcaga gcggcgacag ccgcgccgcg ctcgaacgct ggcgcgcgct
      121 ggaggccaag agtccaccga acgcgcccta cctgcccatg ctgcgcgccg agatcgagcg
      181 ggtggccaag gccgccggca tcgacctgcc cccctcggcc aaatcgccct cgcgcgagca
      241 ggtcgaggcg atgcagaacc tggcgcccga gcagcgccag caggcgatcc gcggcatggt
      301 cgagggcctg gccgcgcgtc tcaaggacaa cccgcaggat cgcgccggct ggctgcgcct
      361 cgccaacgcc tggaaagtct tgggcgagaa cgccgccgcc accgacgcct atgccaaggc
      421 cgacgcgctg ggcccggtcg acgcccgcct gctcgccgac tgggccgagg cccatgtccg
      481 ccagctcgcg cccggccagg cgccgtcgcc cgagtccgtc gccgtgctgc agcgcctgga
      541 gaaggccgag cctagaaatg cgctggcgct gttctatctc ggcgcggcgt cattcgcggc
      601 cggcgacaag cccgcggcgg cccagcgctg gaagacgctg ctcgccctgc tgcccgccga
      661 cgcccccatc cgcgacatgc tggagcagcg catcaaggaa gccgactagg cgggtctgcg
      721 ggggtatttt gtttattttc aagaatttag agacctgttg accggcatcg acctgatgcg
      781 tatatccaat tccactcggt tttacctcgt aaaaccctcg gaacaggagt aagacttcta
      841 acgttatcgg tgggatatgc cgatctgccc tcgtaactct cggtagcaat gtcttatagt
      901 tgcacactac tgacggtcga aaggggcggg gatgtcggaa gccacagcgg aaccgacgga
      961 aggcgagccc aagagcctgg agggtttcga gaaatcgccc gagccggacg tcgttcccat
     1021 cgaaagcttc gtgacggatg tcaaggtcga gaccagcgac gacgccattc ccagcagcta
     1081 gccgcagcgg cccacaggag aaagtcatgc gtatgcagtt cgagattccc gacgacaggt
     1141 atcgcgagct cgaaaccctg atcaaggagg ccggcttcaa gagcaaggcc gatttcttcg
     1201 acaatccgat cgccctcttc aagtggacag tgaagcacgc aaagaaggga aacattatcg
     1261 ccgccgtcga cgagcgcgag cacaagtaca tcgaacttca gatgccttac ctcgatcgcg
     1321 tcaccccgca gttcgcgtac gaggctacgg tgcgcggcag cagctctagc tcttctggaa
     1381 acgaaagcgc cgcttgagcg gccggccaag cgggctggaa gcggctgttg ccgaaggtgt
     1441 tgccaaggcg ctcgaaggct accgcaagga gcgcgagacg gtggtggcgg agcacatcgt
     1501 ggtcgtcgtc gtcgttcagc cgccggcgcc cgacttccgc atcgtcgcgg tttgcgtgct
     1561 ggttgtcctc agtccggttg gcgttctgat ctgtttcgga ggaaacgtgg agaatcacat
     1621 cgctgccatc atcgggctcg ctctagcggc ggtggcgatt gccctcacct tcgcctttcg
     1681 cgacgtgacg ccgttgcagc ggcagatgct gctggctctc tttgcgctcg ccggcggcgc
     1741 gatcgcgacc gagatccccg gcttcctcga catcaagctg acgctgggcg agaagaccgc
     1801 catcggcgcg ggcggcgcgc tgggcgtctt cgtcctgtta tacaggttct cggcggccaa
     1861 gccgccggag tagaccgccc gccgccgacg cctctactcg ggcagccctg ccttgatgag
     1921 atgctcgccg aacagccgcc gcttgtcggg atccttgaag gcatggcctt cggcgaaacg
     1981 ccgggcgctg aacttggggt tgagacgcag caggtcctgg ccgacctggc gcgcctcgtc
     2041 gatctggccg ctggccgcca ggctcgccgc gaggaagcgg atgttgccca cgaagcgcgg
     2101 attgagcgcc atcgaccggc gcccccactg ggccgagtcg gcatagtcgc cggccgcgta
     2161 gctcgacagc gcgaccagcc cgtagctgaa gaagacgtgc gcgtcgtagg gcgacaagcg
     2221 cagcccgata tcggcgcgcc gccgcgcctc gcgcgtctcg ccgatgtagc tgaaggtggc
     2281 gctgctgcgc agccaggcga tcgccgagct ggggttcgcc gccagcgcgc ggtcgaacag
     2341 ttcgatcgcg tggtcgtagt cgtggaacag ccaggaacgg atgtggccgc acagcgagag
     2401 cgcgagcggg tcgaagcggt cgagcgtcag cgccagccgg ctcagccgct ccgcctcctt
     2461 ggtgtcggcg accggatcgg gtgactcgcc ctggtagaag cgctcgccat ggcaggtcgc
     2521 ggccagcgcg tacgccgtcg cataggctgg atcgagcgtc atggctcgct cgaacatcgg
     2581 cagcgcctgc atgaacttgt cgtcgtcgaa gcgatacagc agatcgagcc cgcgcagcac
     2641 gcattcatag gcgtcgaggc tttccgggtg cttgcgctgc acgcggcgca gctcggattc
     2701 ctggacctgc ggcgcgatcg tcgccaccac ccgcgcgctg agctcgtcct gcaactcgaa
     2761 gagatcgccc gcctcgccgg agaagcggtc gctccagatc gccgtgccgc tctcgcaatc
     2821 cgccagttcg gccgacagcc ggaccttctt gccggcccgt cgcacgctgc ccgtcaacat
     2881 gtagcgcacg tcgagatcgc gccggatctg ccgcggatcc ggcaccgtgc cgcggtagcg
     2941 cagcaccgag gcgcgcgaga tcacgatcag ctcgggcagg cacgacagcg ccgagatgat
     3001 gtcctcgacc agcccgtcgc tgaaatacga gttcgccgtc tcggccgacg ggtccgccgt
     3061 cgcggccgac tggtcgacga acggcagcac cgcgatcgac ggccggcgcc gctcgaagct
     3121 gtcgatcgcc ggcgccgtct tgggccgctt gccggggccc accgcatagg cgtgcaccgg
     3181 ccggctgatg ttcttgagct gcagcgtgcc caggtcctcg atcggctggt cgatgcggcc
     3241 gctgatcagg tccatgaccg tggccgacac cagcacgccg ccgatcggcg catgatcctg
     3301 caatcgcgac acgacgttga tgccgtcgcc cagcaggtcc atgccttcga ccgtcacctc
     3361 gcccatgtgg atggcgcagc gcagctccag ccggacgccg ggctcggtcg ccatcttggc
     3421 gacggcggcc tggacctcga gcgccgcccg cgtcgcgtcg accgggctgc tgaactcgac
     3481 cagcaggccg tcgcccagcg acttgaagat gcggccgccg ccgcggacga tcggcggatc
     3541 gatctcgcgc cgcagcgccc gccaggccgc gagcaccttg tcctcgtcgg cttcgacgag
     3601 cgcgctgaag cccaccacgt cgaacgccac caccacgacg agccggcggt tggcttgatc
     3661 cttgttggcg atcgccactg tacgcttgcg agccatcgtc aatccccgcg tcgaaaaaga
     3721 gcatatcacc catgcgtcac aaccgtggcg caatggcggc aatggtgctc cccgagcgtt
     3781 gccgaaagat cacacacgcc ggcatgcgcg acggtcgcgc gctggcgcct cccgcgtctg
     3841 tgcgcttcct cactctggca ggccggcgtt caccagatgc tcggcgaaca gccggcgttt
     3901 gtcggggtcc ttgaacgcat ggccctcgac
//
LOCUS       DASWGA010000868         2760 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1113118, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000868 DASWGA010000000
VERSION     DASWGA010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113118"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1683
                     /gene="rnr"
                     /locus_tag="VF991_20105"
     CDS             <1..1683
                     /gene="rnr"
                     /locus_tag="VF991_20105"
                     /inference="COORDINATES: protein motif:HMM:TIGR02063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEX9558809.1"
                     /translation="EPMGGALSRHARVIERVGAMSDPRTISLISIAANDIPVDFPPAA
                     VEEADRAHAAPLGHRLDLREVPLVTIDGEDARDFDDAVFAEPDPSHPGGWRLLVAIAD
                     VAWYVRHDKPLDRAAYRRGTSVYFPDRVVPMLPEALSNHWCSLVPREDRPVLVAEMSI
                     DAEGHLKRHRFHRAMMRSAARLTYTRVQHAIDGAPDAEIAPLMETVIRPLYGAYKVLL
                     AARDKRGALDLDLPERQVSLGGDGRIAEIGVRERLDSHKLIEEFMVLANVAAAQALEQ
                     RQAPCLYRVHDQPDAAKIEALREFLATLGIALPAAPRLRPGDLNGVLGAVRAAPVARL
                     VNETVLRSQSQAVYSPDNLGHFGLALARYAHFTSPIRRYPDLIVHRSLIAAYGLGEGG
                     LAEADKGRFVEFGEHLSMCERRAVAAERSAMDRYVAAYMAAHVGATFPGRVTSVTRFG
                     LFASLDGTGADGLIPIRSLGQEFFRHDEGRQILVGERTGETYGLGDRLRLKLVEADAA
                     TAGLLFEIVDVIERVERHALPRGRQHPRGEGRARRPVAHRGPPRDKRSRRRK"
     gene            1706..2110
                     /locus_tag="VF991_20110"
     CDS             1706..2110
                     /locus_tag="VF991_20110"
                     /inference="COORDINATES: protein motif:HMM:NF017935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HEX9558810.1"
                     /translation="MSMPPARVELWTTLLRGWHGKCPRCGVGGLFGSFLKMRSHCPAC
                     DLALEPYRADDAPAYFTILVVGHIVVPLVLALERYGDHPPLWFHAVLWLPLSVVLALY
                     LLPHIKGTIIALLWAHRMPAPKPSTGSVDSSA"
     gene            2327..>2760
                     /locus_tag="VF991_20115"
     CDS             2327..>2760
                     /locus_tag="VF991_20115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558811.1"
                     /translation="MLQAYRAIGDRHLFEPNFRNLSAETYRGFAGPDPALSLETSDGA
                     FTVKRDGREVLSRPAPADPADGRAWGGMLAELMAGSMTASQLLQQTDRQVLIHDAMTA
                     TTKQLDRNTRYADPDEARDNRFQRDGGGGIGITVERTDDKKIL"
BASE COUNT          398 a         1008 c          912 g          442 t
ORIGIN      
        1 gagccgatgg gcggcgcgct atcgcgccac gcgcgcgtga tcgagcgcgt cggcgccatg
       61 agcgatccgc gcacgatcag cctgatctcc atcgccgcca acgacattcc cgtcgacttc
      121 ccgccggcgg cggtcgaaga agccgaccgc gcgcacgccg caccgctcgg ccaccggctc
      181 gacctgcgcg aggtgccgtt ggtcaccatc gacggcgagg acgcacgcga cttcgacgac
      241 gcggtgtttg ccgagcccga cccgtcccat cccggcggct ggcgcctcct ggtcgccatc
      301 gccgatgtcg cctggtacgt gcgccacgac aagccgctcg accgcgccgc ctatcgccgc
      361 ggcacgtcgg tctatttccc cgaccgcgtc gtgccgatgc tgcccgaggc gctctccaac
      421 cattggtgct cgctggtgcc gcgcgaggac cggccggtgc tggtggccga gatgtcgatc
      481 gacgcggagg gccacctcaa gcgtcaccgt ttccaccgcg ccatgatgcg ctcggcggca
      541 cggctcacct acacgcgcgt ccagcacgcc atcgacggcg cgcccgacgc cgagatcgcg
      601 cccttgatgg agacggtgat ccgcccgctc tacggcgcct acaaggtgct gctggcggcg
      661 cgcgacaagc gcggcgcgct cgacctcgat ctgccggagc gccaggtgag cctgggcggc
      721 gacggccgca tcgccgaaat cggcgtgcgc gagcggctcg acagccacaa gctgatcgag
      781 gagttcatgg tgctggccaa tgtcgcggcg gcgcaggcgc tcgagcagcg ccaggcgccc
      841 tgcctctacc gcgtccacga ccagcccgat gccgccaaga tcgaggcgct gcgcgagttt
      901 ttggccacgc tcggcatcgc cttgccggcc gccccgcggc tgagaccggg cgatctcaac
      961 ggcgtgctcg gcgccgtcag ggccgcgccg gtggcgcgcc tggtcaacga gaccgtgctg
     1021 cgcagccaga gccaggccgt ctacagtccc gacaatctcg ggcatttcgg gctggcgctg
     1081 gcgcgctacg cccacttcac ttcgccgatc cggcgctatc ccgacctgat cgtccatcgc
     1141 tccctgatcg ccgcctacgg gctgggcgaa ggcggcctgg ccgaggccga caagggccgg
     1201 tttgtcgaat tcggcgagca cctgtcgatg tgcgagcggc gcgccgtcgc cgccgaacgc
     1261 agcgccatgg atcgttatgt cgcggcctat atggcggccc atgtcggcgc cactttcccc
     1321 ggccgggtca ccagcgtcac ccgtttcggc ctgttcgcct cgctcgacgg caccggcgcc
     1381 gacggcctca ttcccatccg ctcgctcggc caggaattct tccgccacga cgagggccgc
     1441 cagatcctgg tcggcgaacg caccggcgag acctacgggc tgggcgaccg gctgcggctg
     1501 aagctggtcg aggccgacgc cgcgaccgcc ggcctgttgt tcgagatcgt cgacgtcatc
     1561 gaacgggtcg agcgccacgc cctgccgcgc ggccgccaac acccgcgcgg cgaaggccgg
     1621 gcgcggcgtc cggtcgcgca tcgcggaccg cctcgggaca aacggtcgcg acgacgaaag
     1681 taagccgagc gcccatgttg tcggcatgag catgccgccc gcccgggttg agttgtggac
     1741 gaccctgttg cgcggttggc acggaaagtg tccgcgctgc ggcgtcggcg gcctgttcgg
     1801 cagctttctc aagatgcgca gccattgccc ggcctgcgat ctggcgctcg agccctatcg
     1861 ggccgacgac gcgccggcct atttcaccat cctggtcgtc ggccacatcg tggtgccgct
     1921 ggtgctcgcc ctggagcgct acggcgacca tccgccgctg tggtttcacg ccgttttatg
     1981 gctgccgctg tcggtagtgc ttgctctcta cctgttgcct cacataaaag gcacaattat
     2041 tgcgctctta tgggcgcacc ggatgcccgc tcccaagccg tcgaccggga gcgtcgactc
     2101 ttcagcttga actatggccg cccgccagcg gcttgtgcta ttgttgtcgc ctgcgggggt
     2161 atacaaagaa gtgccgctta tccgtttgtt tcgctgggca ctgccgcgtg cggcaggcgc
     2221 cctgttcgct gcctctctgg tcgtctcctg tgcgacgtcg accgaaccgt ctcagacgca
     2281 aggccgtaac ccagcggttg ccgccgacgt caatatcgag agggtggtgc tgcaggccta
     2341 tcgcgcgatc ggcgatcgcc acctgttcga gcccaatttc cgcaatctgt cggccgagac
     2401 ctaccgcggc tttgccggcc ccgacccggc gctgtcgctc gagacgtcgg acggagcctt
     2461 cacggtcaag cgcgacggcc gcgaggtgct gagccggccg gcgcccgccg atccggccga
     2521 cggccgggcg tggggcggca tgctggccga gctgatggca ggctcgatga cggcctcgca
     2581 gctcttgcag cagaccgacc gccaggtgct gatccacgac gccatgacgg ccaccaccaa
     2641 gcagctcgac cgcaacaccc gctatgccga tcccgacgag gcgcgcgaca atcgcttcca
     2701 gcgcgacggc ggcggcggca tcggcatcac ggtcgagcgc accgacgaca agaagatcct
//
LOCUS       DASWGA010000869         7362 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2381572, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000869 DASWGA010000000
VERSION     DASWGA010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7362
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2381572"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..642
                     /locus_tag="VF991_20120"
     CDS             <1..642
                     /locus_tag="VF991_20120"
                     /inference="COORDINATES: protein motif:HMM:NF013357.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 25 protein"
                     /protein_id="HEX9558812.1"
                     /translation="GTNSIIDISSFQGLPDFKKIKAAGIVGVLHKATEGVGFHDSTYA
                     ANKKAARAEGLLWGAYHFGKGSDPAKQAEEFVRVADVADDELLVLDYETNEHGTQMKV
                     RGAKQFINRVLELTGRRPGLYSGNTIRDDLGNTADPDLAKCWLWVAHYDSPPAAPKIH
                     KTWSKWTLWQYTDGQAGPDPHSITGFGRCDRDTFNGDEVALDKFWKSGGTIHP"
     gene            complement(697..1599)
                     /locus_tag="VF991_20125"
     CDS             complement(697..1599)
                     /locus_tag="VF991_20125"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9558813.1"
                     /translation="MPKTLFIDSNQDIDRVWKRVHGPGDVEIAINMGPLAEADIPERV
                     EGYDTVINDATYFNETTLKLCRGLKHIVFLGTGAASFVDLAAASRLGIKVSTISGYGD
                     TTVAEHAMGLVFAAARHIATMHGIVRGGAWRPMQGMELRGKILGVVGLGGIGREMARI
                     ASGVGLEVIAYNRSVRPGASVSMMGIDELLRQSDIVSLHLALNDETRGFLDRARLQRT
                     KRGVIIVNTARAGVVDEPALIDLLKSGHVGHYATDVLAKEPPNPDEPLLKLDNVTLTA
                     HAGYNTPEAAMTMYRRAIDLAKAG"
     gene            complement(1627..2508)
                     /locus_tag="VF991_20130"
     CDS             complement(1627..2508)
                     /locus_tag="VF991_20130"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX9558814.1"
                     /translation="MAKRINRAIELLEADQALYYDGAHTGHVLTYEQGRKDARTWADY
                     INVGMEHGAFDMTALGEYMRGLVDGGPTNSGHRTPTVIVEAPVNGIDGPNVAFNAWQF
                     RQILGRGVHGILLCQAESADAVKEFVRACRFPHHKLGTDKLGIGSRGRGSEPTAAPVW
                     GIDQQEYFARCEPWPLNPAGELLLGVKIESPPGVAHCEEILAVPGLGFAELGPGDLGL
                     SLGYTALQRRPYPAEMEEARARVFAACRKNKLAFLEGATPDRIVASLDEGVRVIAGHN
                     PETAKVGRAHQKRTMPV"
     gene            2589..3275
                     /locus_tag="VF991_20135"
     CDS             2589..3275
                     /locus_tag="VF991_20135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9558815.1"
                     /translation="MIKFFYNLAPNPTKVALCLEDMGLPYEVAPIDTRKGEQHTPAFL
                     AINPNAKVPAIVDGDATVFDSNAILLYLAEKTGKFLPGTSLKARGEMLSWLMFVASGI
                     GPFSGQAVHFKNVAPEPKDYAVNRYTFEAQRHWGILEARLGKHRYMCGDAYSIVDMAV
                     WGWSRLIPNVLGPDAAKQLPNLQRHLGEINARPAAARALALKDKHSFKTEMDETARLA
                     MFPHLAKKVA"
     gene            3297..3743
                     /locus_tag="VF991_20140"
     CDS             3297..3743
                     /locus_tag="VF991_20140"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9558816.1"
                     /translation="MRERPHHAAAVAERIWNAFWRHKGTPFARIRDGLDAIVKVEDGV
                     PFALVAEIDGQPCGNALVIGNDEPAKPELTPWLAALWVDEAMRGKGIAGALLDTAASR
                     CHTLGVPRLYLTSRPALRGFYTERGWRIEEETVGKAALTLYSRTLQ"
     gene            complement(3772..4668)
                     /locus_tag="VF991_20145"
     CDS             complement(3772..4668)
                     /locus_tag="VF991_20145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558817.1"
                     /translation="MQLIDIVNSGNSVAFVNLGAFKDLVVELQTILGRTGLLDPPADG
                     KFGQVSKWALNEAVKALKQAPKSEIDAALARALLDADPASLLPIKPKADFAGKIASYM
                     MSRNLWLNRHPACVNIVYVEGSELDGTANANVPNQFNDVRAILRVAPQTGVPEIVQAW
                     EATTEPGRFYTEVKIENPGGAARIGFGQYKSWAVGMHGAGNGAHEALVQVDDVTVYRD
                     ANRDYKRAGDLPDTGMFGINQHWGYDLPRTDIQNASAGCLVGRLKNGHREFMKLVKDD
                     QRYLQNHGYRFMATVIDRSALN"
     gene            4808..6019
                     /locus_tag="VF991_20150"
     CDS             4808..6019
                     /locus_tag="VF991_20150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9558818.1"
                     /translation="MDLTFGKEELAFQQEVRTWLKENLTPEITGETKVGRNAYMPKER
                     LVDWQKRLAKKGWLCTGWPKEFGGPGFTTTQKYIFEMEMARAGAPGTSPFGPKMCAPV
                     IMKYGSAEQKARHLPPMLNSDLIWCQGYSEPGSGSDLASLRTKAVREGDHYVVNGQKT
                     WTTLAQTADWIFCLVRTSNEGKPQEGISFLLVDMKTPGISVEPIITADGNRAGTQEVN
                     SVFFTDVKVPVENRVGEENKGWTYAKYLLEFERGGNPYSPRLRSAFERLKKLSQAMPD
                     GEASIMADVSWREKLARMDIEISGLEMFEQEFYSRLASGQNPGPLSSMIKLRGTEVMQ
                     QVQESAVEAAGYYSQPFPEQRAWNANVEPIGPEGVDVLAPRYFNGRKMTIYGGSSEVQ
                     RGIMSKVMLGL"
     gene            6143..>7362
                     /locus_tag="VF991_20155"
     CDS             6143..>7362
                     /locus_tag="VF991_20155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9558819.1"
                     /translation="MRLAFTDEELAFQREVRDWIAANMPPEVAEESRRSRTSHVSKER
                     LLQWQKKLASKGWLCPNWPEEHGGPGWNSTQKFIFEMEMARADSPYLSSFSIKMVAPV
                     LMKYGSAAQKKRFLPKIAAAEELWCQGYSEPGSGSDLASLRTKAERRNDETGDHYLVN
                     GQKIWTTNAHFADWIFCLVRTSNEGKRQEGISFLLIDMKSPGIRIDPIYLVDGTRTPM
                     RHEVNQVFFTDVRVPVENLVGEENKGWTYAKYLLEFERGGQAHGPRLRKAFRHLQTLS
                     KTQLDAGAPLSANPEWREKMAALEMEIDAVEMNELMFYSSLKTGDAPGNMGSVVKMRG
                     TEVGQKVTELAVEAVGWYAAPFTELRNYDSNIVPVGGEYVDDVSPRYFNTRKTTIYGG
                     SSEVQRNVLAKAML"
BASE COUNT         1349 a         2306 c         2443 g         1264 t
ORIGIN      
        1 ggaaccaaca gcatcatcga catttcatcg tttcagggcc ttccggattt caagaagatc
       61 aaggccgcgg gcattgtcgg cgtccttcac aaggcgacgg aaggcgtggg ctttcacgac
      121 tcgacctacg ctgccaacaa gaaggcggcg agggccgagg gattgctatg gggcgcctat
      181 catttcggca agggatcgga tccggccaaa caggccgagg aattcgtacg agtcgccgac
      241 gtggccgacg acgagctgct cgtgctcgac tacgagacca acgagcacgg cacgcaaatg
      301 aaggttcggg gcgccaagca gttcataaac cgggtgctcg agctgaccgg ccggcggccc
      361 ggcctctatt cgggaaacac catccgggat gacttgggaa ataccgccga tccggatttg
      421 gccaaatgct ggttatgggt cgcccactac gacagccccc cggccgcccc gaaaatccac
      481 aagacatggt ccaagtggac cctgtggcaa tacaccgacg ggcaggctgg tccggatccg
      541 cattcgatca ccgggttcgg caggtgcgac cgcgacacct tcaacggcga cgaggtggcc
      601 ctcgacaaat tctggaagag cggcggaaca atccatccgt gaagcccggc cgctaggccg
      661 gcgtcgtccg cttctcgcca gtgccgtgtt ggctggtcag cctgccttcg ccaggtcgat
      721 ggcgcgacga tacatggtca tcgccgcttc gggtgtgttg tagcctgcgt gcgcggtgag
      781 cgtgacattg tcgagcttca gcaatggctc gtcggggttg ggcggctcct tggcgaggac
      841 gtcggtcgcg tagtggccga catggcctga cttcagaaga tcgatcagag ccggctcgtc
      901 gaccacgccg gcgcgagcgg tgttgacgat gatcacgccg cgcttggtcc tctgaagtct
      961 tgcccggtcg aggaagccgc gcgtctcatc gttcagggca agatgcaggc tcacgatgtc
     1021 cgattgccgg agcagctcgt cgatgcccat catcgacacg gacgcaccgg ggcgcacgga
     1081 ccggttatag gcaatgactt cgagtccgac acctgatgcg atgcgcgcca tctcgcggcc
     1141 gatgccgccc agtccgacga cgcccaggat cttgccgcga agctccatgc cctgcattgg
     1201 ccgccaggcg ccgccgcgaa cgatcccgtg catggtcgcg atgtgacggg cggcggcgaa
     1261 caccagaccc atggcatgct cggcaaccgt cgtgtcgcca tagccgctga tggttgagac
     1321 cttgatgccg agccgcgacg ctgccgccag atcgacgaag cttgccgcgc ccgtgccgag
     1381 aaagacgatg tgcttcaggc cgcggcagag cttgagcgtc gtctcgttga aatacgtcgc
     1441 gtcgttgatc accgtatcat agccttcgac ccgctcggga atatcggctt cggcgagggg
     1501 gcccatattg atcgcgatct cgacatcgcc cgggccatgg acccttttcc acacgcgatc
     1561 gatgtcctga ttcgaatcga tgaagagcgt cttgggcatg gtttgcttcc tcgaaactgc
     1621 aggcgctcag accggcatcg tgcgcttctg gtgggcgcgg ccgaccttgg cggtctcggg
     1681 attgtggccg gcgatcacgc gcacgccttc gtcgaggctg gcgacgatcc tgtccggggt
     1741 ggcgccctcg aggaaggcga gcttgttctt ccggcaggcg gcgaagaccc tggcgcgggc
     1801 ctcttccatt tcggctgggt agggacgacg ctgcagggcc gtgtagccca gtgaaaggcc
     1861 gagatcgccc ggccccagct cggcaaaacc caatccaggc accgccaaga tctcctcgca
     1921 atgggccacc ccgggcggac tctcgatctt gacgccgagc agaagctcgc ccgccggatt
     1981 gagcggccac ggctcgcagc gggcgaaata ctcttgctga tcaatgcccc agaccggggc
     2041 cgccgtcggc tccgagccgc ggccgcggct gccgatgccg agcttgtcgg tgccaagttt
     2101 gtggtgcggg aagcggcagg cacgcacgaa ctccttcacg gcgtcggccg attccgcctg
     2161 gcacaacaga atgccgtgca cgccgcgtcc caggatctgg cggaactgcc aggcgttgaa
     2221 ggcgacgttg gggccgtcga tgccgttgac cggcgcctcg acgatgacgg tgggggtgcg
     2281 gtggccggag ttggtcggcc cgccatcgac caggccgcgc atgtattcgc cgagcgccgt
     2341 catgtcgaag gcgccgtgct ccatgccgac attgatgtag tcggcccagg tcctggcatc
     2401 cttgcggccc tgctcgtagg tcagcacatg gccggtatgc gcgccgtcat aatagagggc
     2461 ctggtcggcc tccaaaagct cgatggcgcg gttgatgcgc ttggccatac gtttcctccg
     2521 tttgcttggc cccagcatag ccgtagagtg ccgcccatag caggaaacaa ctcgacgagg
     2581 aggaagccat gatcaagttt ttctacaatc tcgcgcccaa tccgacgaag gtggccttgt
     2641 gcctggagga catgggcctg ccttacgagg tcgcgccgat cgacacgcgc aagggcgagc
     2701 agcacacgcc ggccttcctg gcgatcaacc cgaacgccaa ggttcccgcc atcgtcgacg
     2761 gtgacgccac cgtcttcgac agcaacgcga tcctgctcta tctcgcggaa aagaccggaa
     2821 agttcctgcc cggcacgtcg ctcaaggcgc gcggcgagat gctgtcgtgg ctgatgttcg
     2881 tcgcctccgg catcggcccg ttctcgggcc aggccgtgca tttcaagaac gtcgcgcccg
     2941 agcccaagga ctatgcggtc aatcgctaca ccttcgaggc gcagcgtcac tggggcatcc
     3001 tcgaggcaag gctgggcaag catcgttaca tgtgcggcga tgcctacagc atcgtcgaca
     3061 tggcggtgtg gggctggtcg cgcctgatcc ccaacgtgct ggggccggac gccgccaagc
     3121 agctgccgaa cctgcagcgc catctcggcg agatcaacgc gcgcccggcg gctgctcggg
     3181 cgctggcctt gaaggacaag cacagcttca agacggagat ggacgagacc gcacggctcg
     3241 cgatgttccc gcatctggcc aagaaggtcg cttgaggccg gcgcccggca tctttcttgc
     3301 gcgagcggcc gcaccatgcg gccgcggtcg cggagcgcat ctggaatgcc ttctggcggc
     3361 acaagggaac gccgttcgcc aggattcgcg acggactgga cgccattgta aaagttgagg
     3421 atggcgtgcc gttcgcgctg gttgccgaga tcgacgggca gccctgcgga aacgccctgg
     3481 tgatcggcaa cgacgagccg gcgaagcccg agctcacgcc ctggctcgcc gcgctctggg
     3541 tcgacgaggc catgcggggc aagggcatcg ccggcgcgct gctcgacacg gcggcgagcc
     3601 gctgccacac actcggcgtg ccgcgtctct atcttacgtc gcgtccggcg ttgcgcggct
     3661 tctacaccga gcgcggctgg cggatcgagg aggagacggt cggcaaggcg gccctcacgc
     3721 tctattcgcg gacgctgcag tgagcggggt gcaggcgatg ccgctatcct gctaattcaa
     3781 tgcgctgcgg tcgatgaccg tcgccatgaa gcgatagccg tggttttgaa ggtacctctg
     3841 atcgtccttg accagcttca tgaactcgcg gtgcccgttc ttcagacgcc cgaccaggca
     3901 gccggcgctg gcgttctgga tgtcggtgcg gggcaggtcg taaccccagt gctgattgat
     3961 gccgaacatg ccggtatccg gcagatcgcc ggcgcgcttg tagtcccggt tggcatcgcg
     4021 gtagaccgtg acgtcgtcca cctggacaag cgcttcatgg gcaccgttgc cggcgccgtg
     4081 cattccgacc gcccaggact tgtattggcc aaagccgatg cgcgccgcgc cgccgggatt
     4141 ctcgatcttg acctcagtat agaagcggcc gggttcggtc gtcgcctccc aggcttggac
     4201 gatctccggc acgccggtct gcggcgcaac ccgcaggatc gcgcgaacgt cgttgaactg
     4261 gttcggcaca ttggcattgg cggtgccgtc gagttccgag ccctcgacat agacgatgtt
     4321 gacgcaagcc gggtgccgat tgagccacag gttcctcgac atcatgtagc tggcgatctt
     4381 gcccgcgaaa tcggccttgg gcttgatcgg gagcaagctg gcaggatcgg cgtcgaggag
     4441 ggcgcgggcg agcgctgcgt cgatctccga cttgggcgcc tgcttgagag ccttgacggc
     4501 ttcgttcagc gcccatttcg acacctggcc gaacttgccg tccgccggcg ggtcgagtag
     4561 cccggtgcgg cccaggatcg tctgcagctc cacgacgaga tccttgaagg cgccgagatt
     4621 gacgaaggcg acggagttgc cggagttgac gatgtcgatg agctgcatgg aagtccccac
     4681 aatggctcgc tgacagggta gtacactgta taggcttttc aacagggagt agcaatatcg
     4741 ccgaagccct cagcttgatc ggcagagggg ggatgagtag cgtggcatca acacccgagg
     4801 agctttcatg gatctgacat tcggcaagga agagctggcc ttccagcagg aagtgcggac
     4861 ttggctgaag gagaacctga cgcccgagat cacgggcgag accaaggtcg gccgcaacgc
     4921 ctacatgccc aaggagcggc tggtcgactg gcagaagcgg ctggcgaaga agggctggct
     4981 gtgcaccggc tggcccaagg aattcggcgg gccgggcttc accacgacgc agaagtacat
     5041 cttcgagatg gagatggcgc gcgccggcgc gcccggcacc tcgccgttcg gccccaagat
     5101 gtgcgcgccg gtgatcatga aatacggctc ggccgagcag aaggcgcgtc atctgccgcc
     5161 gatgctgaac tccgacctga tctggtgcca gggttactcc gagccgggct cggggtcgga
     5221 cctcgcgtcg ttgcgcacca aggcggtgcg cgagggggat cattacgtcg tcaacggcca
     5281 gaagacctgg acgacgctcg cccagaccgc cgactggatt ttctgcctgg tgcgcacctc
     5341 gaacgagggc aagccgcagg agggcatctc cttcctgctg gtcgacatga agacgccggg
     5401 catttcggtc gaaccgatca tcaccgccga cggcaaccgc gccggcacgc aggaggtgaa
     5461 ctcggtgttc ttcaccgacg tcaaggtgcc ggtcgagaac cgggtcggcg aggagaacaa
     5521 gggctggacc tacgccaagt acctgctcga gttcgagcgc ggcggcaatc cgtacagtcc
     5581 gcgcctgcgc tcggccttcg agcggctgaa gaagctgtcg caggccatgc cggacggcga
     5641 ggcctcgatc atggccgacg tctcctggcg cgagaagctg gcgcgcatgg acatcgagat
     5701 ctccggcctg gaaatgttcg agcaggaatt ctattcgcgg ctggcgtcgg gccagaaccc
     5761 gggcccgctg tcgtcgatga tcaagctgcg cggcaccgag gtgatgcagc aggtgcagga
     5821 atccgccgtc gaggccgccg gctattatag ccagccgttt cccgagcagc gcgcctggaa
     5881 cgccaatgtc gagccgatcg ggcccgaggg cgtcgacgtg ctggcgccgc gctacttcaa
     5941 cggccgcaag atgacgatct acggcggctc gtcggaagtg cagcgcggga tcatgtcgaa
     6001 ggtgatgctg gggctttagg cgctcgtcgt cccgagcgta agcgaaggac ctcatcgccg
     6061 cttgccacgg acatgagagc cgtcgcttcg cttcagcgcg ggggttaccc cgcgcgcgat
     6121 gacaaccgta gcggagcaag agatgcgttt ggccttcacc gacgaggaac tcgcgttcca
     6181 acgcgaagtg cgcgactgga tcgcggccaa catgccgccg gaggtggcgg aggagagccg
     6241 ccgcagccgc accagccacg tctccaagga gcggttgctg caatggcaga agaagctcgc
     6301 cagcaagggt tggctttgcc ccaactggcc cgaggaacat ggcgggccgg gctggaattc
     6361 gacccagaaa ttcatcttcg agatggagat ggcgcgcgcc gattcgccct atctctcgtc
     6421 cttcagcatc aagatggtgg cgccggtcct gatgaaatac ggcagcgccg cgcagaagaa
     6481 acgcttcttg cccaagatcg ccgccgccga ggagctgtgg tgccagggct attccgagcc
     6541 gggctcgggg tccgaccttg ccagcctgcg caccaaggcc gagcggcgta acgatgaaac
     6601 gggcgaccat taccttgtca acggccagaa gatctggacc accaacgccc atttcgccga
     6661 ctggatcttc tgcctggtta gaacctcgaa cgagggcaag cgccaggagg gcatctcctt
     6721 cctgctgatc gacatgaaat ccccgggcat tcgcatcgat ccgatctacc tggtcgacgg
     6781 cacgcgcacg ccgatgcggc acgaggtcaa ccaggtcttt ttcaccgacg tcagggtgcc
     6841 ggtcgagaac ctggtgggcg aggagaacaa gggttggacc tacgccaagt acctgctcga
     6901 gttcgagcgc ggcggccagg cgcacgggcc gcgcctgcgc aaggcctttc gtcacctgca
     6961 gaccttgtcg aagacgcagc tcgatgcggg cgcgccgctg tccgccaatc ccgagtggcg
     7021 cgagaagatg gcggcgctgg agatggagat cgacgccgtc gagatgaacg agctgatgtt
     7081 ctattccagc ctcaagaccg gcgatgcgcc cggcaacatg ggctcggtgg tcaagatgcg
     7141 cggcaccgag gtcggccaga aggtgaccga actcgccgtc gaggcggtcg gctggtacgc
     7201 cgcgccgttc accgagctgc gcaactacga cagcaacatc gtgccggtcg gcggcgagta
     7261 tgtagacgac gtgtcgccgc gatacttcaa tacccgcaag accacgatct atggcggatc
     7321 gtcggaagtg caacgcaacg tgctcgccaa agcaatgctg ga
//
LOCUS       DASWGA010000870         3280 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2126197, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000870 DASWGA010000000
VERSION     DASWGA010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3280
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2126197"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..1725)
                     /locus_tag="VF991_20160"
     CDS             complement(148..1725)
                     /locus_tag="VF991_20160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558820.1"
                     /translation="MPTVTTKPPLIPPRVERLLLVPLFALPILWLAGYFFPPINHDVA
                     AILDVSARWAGGEKLYVEVIDENLPLTFIVHALPVLTAKILPGGVTFWFTAWVVAGIF
                     ASFWACRRLVRLVPSADHALTEALLPPVLLFLFTVLPNEHFGQREHIMFVACAPYLIA
                     SMARAEGVALGRGSAIAIGLVAGVAFAMKPHFLAIPATLELYLLVRRGWRATVIDPIP
                     WSIGVVAVAHVVSMYTIFSDYGRFVMPLAVEAYAPIGEEGWRGVLTSNVLGPTLIALV
                     IFGVIAVVFTKTISARVLVVFGIGAAISAIAQAKGWPYHVLPALSAAILLAALTVSQT
                     VDRYLPISRSGHHLPVSVISATLMVLLYFQAALSTPPFYKQRQFEDSIGGRLQHIIEQ
                     NAPHRTILALSPGIYPWWPLVNYIGGRMDMRFLSMWVLQGVYATCDDFPALYNPPDTM
                     GDSEKFVFDAVSEDFVREQPDLVIVDRVAGIPRCQGKEFDYLEYFMQNRVFADAFEGY
                     EHLMDFDRYRIYRHKKK"
     gene            1812..2528
                     /locus_tag="VF991_20165"
     CDS             1812..2528
                     /locus_tag="VF991_20165"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX9558821.1"
                     /translation="MHELEDRMWWYRGLRALAAQLLGRTLARSSVFGPVLDAGCGTGG
                     MLLKLGAAVSDRPTLGLEYDTLAATLAAAKAGRPVAAGSVNEMPLGDGTLGAYLSLDV
                     LCHGAVEPALALKEAHRCLRPGAIALFNLPAYGWLLSAHDRRVHNVRRFTGGQARALL
                     VGHGFRVLRSSYWNTLLFPLMLLHRLVGRDDAESDVRDYPRWLDGLFAAALAVERAVI
                     ATGISLPFGGSLIIVAARDG"
     gene            2521..>3280
                     /locus_tag="VF991_20170"
     CDS             2521..>3280
                     /locus_tag="VF991_20170"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX9558822.1"
                     /translation="MAEAPALSVVIPVYNGAATIGELVQALRGLDVEGGLEIVLVVDC
                     SPDNSLEVCKQLVAEPGPPVTVLSLSRNFGEHNAVMAGLYRARGAYAITMDDDLQNPP
                     SEVKRLFEHARDGGYDAVYTYYEEKQHATWRNWGSRFTNWCADRLIDKPPGLYLSSFR
                     CISAFVRERIVASYEGPYPYVDGLVLQVTQNIGRLQVKHLPRIEGRSNYTLRRLVRLW
                     LSMFLNFSVMPLRLATLFGLGFGALGALAAIIVVA"
BASE COUNT          570 a         1053 c         1132 g          525 t
ORIGIN      
        1 gccggatgtc gacaagatcc ccgaggcgat gcgggccaag gtgatgagca agtgggggca
       61 atgagcaaaa ctgtcatccc gagcgcagcg agggaccttt cctgcggcct taaagatccc
      121 tcgcttcgct cgggatgaca ctgcgtgtca cttcttctta tgccggtaga tccggtagcg
      181 atcgaaatcc atcaggtgtt cgtagccttc gaaggcgtcg gcgaacacgc ggttctgcat
      241 gaagtattcg aggtaatcga attccttgcc ctggcagcgc gggatgccgg cgacgcggtc
      301 gacgatcacg aggtcgggct gctcgcggac gaaatcctcg ctcacagcgt cgaatacgaa
      361 tttctccgaa tcgcccatcg tgtcgggcgg attgtaaagc gcgggaaaat cgtcgcaggt
      421 ggcgtacacg ccctgcagca cccacatgct gaggaagcgc atgtccatgc gcccgccgat
      481 atagttgacc agcggccacc atggatagat gccgggcgaa agcgccagga tcgtgcgatg
      541 cggggcgttc tgctcgatga tgtgctgcag cctgccgccg atcgaatcct cgaactggcg
      601 ctgcttgtag aaaggcggcg tggaaagcgc cgcctggaag tagagcagca ccatcagggt
      661 ggccgagatc accgacaccg gcaggtgatg gccgctgcgg ctgatcggca ggtagcggtc
      721 gacggtctgc gatacggtga gtgcggcgag caggatcgcc gccgagaggg ccggcagcac
      781 gtgatagggc cagcccttgg cctgggcgat ggccgagatc gccgcgccga tgccgaacac
      841 cacgagcacg cgcgccgaaa tggtcttggt gaagaccacg gcgatgacgc cgaagatcac
      901 gagcgcgatc agggtgggcc cgagcacgtt gctggtcagc acgccgcgcc agccctcctc
      961 gccgatcggc gcataggcct cgacggcgag cggcattacg aagcggccgt agtcggagaa
     1021 gatcgtgtac atcgacacca cgtgcgcgac tgccacgacg ccgatcgacc atgggatggg
     1081 atcgatgacg gtcgctcgcc agccgcggcg gaccagcagg tagagttcca gcgtcgccgg
     1141 gatggcgagg aagtgcggct tcatggcgaa cgccacgccc gccaccaggc cgatcgcgat
     1201 ggccgaaccg cgccccagcg ccacgccttc ggcgcgggcc atcgaggcga tcaaataggg
     1261 cgcgcaggcc acgaacatga tgtgctcgcg ctggccgaaa tgctcgttgg gcagcaccgt
     1321 gaacaggaac agcagcaccg gcggcagcag cgcctcggtc agcgcatggt cggccgacgg
     1381 gacgagccgc accaggcgac ggcaggccca gaaggaggcg aagatgccgg ccaccaccca
     1441 ggcggtgaac cagaaggtga cgccgcccgg caggatcttc gccgtcagca ccggcagggc
     1501 gtgcacgatg aaggtgagcg gcaggttctc gtcgatcacc tcgacataaa gcttctcgcc
     1561 gccggcccag cgcgccgaga cgtcgaggat cgcggcgacg tcgtggttga tgggcggaaa
     1621 gaagtagccg gccagccaca ggatgggcag ggcaaacagc ggcaccagca gcagccgttc
     1681 gacacgcggc ggaatgagcg ggggcttggt cgtgacggtt ggcaaggcag ggtgaagata
     1741 tcataagcgg gcgggcggaa gacacttgcc gggaggggac tgagggcgtg gagcgggctg
     1801 aatacgagcg catgcacgag cttgaggacc gcatgtggtg gtatcgcggc ctgcgtgcgc
     1861 ttgccgcgca gcttctcggc cgtacgcttg cccgctcctc ggttttcggt ccggtgctcg
     1921 acgccggctg cggcaccggc ggcatgctgc tgaagctggg cgctgcggtg tcggatcggc
     1981 ccacccttgg cctggaatac gacacccttg ccgctaccct cgccgccgcc aaggctggcc
     2041 gcccggtggc cgcgggttcg gtcaacgaaa tgccgctcgg cgatggcacg ctcggcgcct
     2101 acctgtcgct cgacgtcctc tgccacggcg ccgtcgaacc ggccctcgcc ctgaaagagg
     2161 cgcatcgctg cctccggccg ggcgcgatcg cgctgttcaa tctgccggcc tacggctggc
     2221 tgttgtcggc acatgaccgg cgcgtgcaca atgttcgccg cttcaccggc ggccaggcgc
     2281 gcgccctgct cgtcggccac ggctttcgcg tcctgagatc gagctactgg aacaccctgt
     2341 tgtttcccct gatgctgctg caccgcctgg tcggacgcga cgacgccgaa agcgatgtgc
     2401 gcgactatcc gcgctggctc gacgggctgt tcgcggcggc gctcgccgtc gaacgtgccg
     2461 tgatcgcgac cggcatcagc ctgccgttcg gcggctccct gatcatcgtg gcggcgcgtg
     2521 atggctgagg cgccggcact ttctgtcgtg atcccggtct acaacggcgc cgccacgatc
     2581 ggcgagctgg tgcaggcgct gcgcgggctc gacgtcgaag gcgggctgga gatcgtgttg
     2641 gtggtcgact gcagcccgga caacagcctg gaggtctgca agcagctcgt cgccgagccg
     2701 gggccgccgg tcaccgtgct gagcctcagc cgaaatttcg gcgagcacaa cgcggtgatg
     2761 gccgggcttt accgcgcgcg cggcgcctac gccatcacca tggacgacga cctgcagaac
     2821 ccgccatccg aggtcaagcg cctgttcgag cacgcccgcg acggcggcta cgatgcggtc
     2881 tacacctact acgaggagaa gcagcacgcg acctggcgca actggggcag ccgcttcacc
     2941 aactggtgcg ccgaccggct gatcgacaag ccgcccggcc tctatctctc gagcttccgc
     3001 tgcatctccg ccttcgtgcg cgagcgcatc gtggcaagct acgaggggcc ctatccctat
     3061 gtcgacggcc tggtgttaca ggtgacgcag aatatcggcc gcctgcaggt caagcacctg
     3121 ccgcgcatcg agggacggtc gaactacacg ctgcgccggc tggtgcggct gtggctgtcg
     3181 atgttcctca atttctcggt gatgccgctg cgtctcgcca ctttgttcgg actgggcttc
     3241 ggcgcgctgg gcgcgctggc cgcgatcatt gtcgtagccg
//
LOCUS       DASWGA010000871         7863 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1753154, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000871 DASWGA010000000
VERSION     DASWGA010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7863
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1753154"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VF991_20175"
     CDS             <1..490
                     /locus_tag="VF991_20175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEX9558823.1"
                     /translation="FGHVRSRFDRFLDPSSGDNYQVNTSLEAFMNGSLFGRGPGEGTV
                     KAQLPDAHTDFVMAVAGEEFGLIVCLMILALFAFVTLRALSRASKETSLFITLAATGL
                     AVQFGLQAAINMASTIQLIPAKGMTLPFISYGGSSALAMAICVGMMLSLTREHAGLRE
                     AV"
     gene            490..1623
                     /gene="murG"
                     /locus_tag="VF991_20180"
     CDS             490..1623
                     /gene="murG"
                     /locus_tag="VF991_20180"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006725939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEX9558824.1"
                     /translation="MEPRPPHGPVVLAAGGTGGHVFPAEALAGELEARGVPFTLVTDS
                     RGRQWQGALAHRPIHYIHSASPTGSLGQRLQAMMALGRGLFDAWWALGRIGPSAVVGF
                     GGYASVPTMIAARLRRLPSMLHEQNAVLGKANRLVLGGAARVATSFARTRYIPENDHR
                     ARVVGNPVRESVRALRSSPYRAPGEGRVFDLLVFGGSQGAASFSQVVPDAALSLPAAL
                     RQRLRLVQQCRPEDLDRVRRSYARAGIVVELAPFFADLPQRLAAAHLVIGRAGASTVA
                     ELATIGRPSILVPYPYAADDHQTANARAFEAAGACIVIPHAAFTAAALAGHLTALIET
                     PQRLADMAAAAHAAGRPDAAARLADLVGEMATGPILSPSGVAA"
     gene            1620..3098
                     /gene="murC"
                     /locus_tag="VF991_20185"
     CDS             1620..3098
                     /gene="murC"
                     /locus_tag="VF991_20185"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEX9558825.1"
                     /translation="MRALPLDIGLIHFVGIGGIGMSGIAEVLHNLGYRVQGSDLSEGA
                     NTRRLAELGIKVAIGHRADNIANAQVVVVSSAVKKDNPEVLAARARLVPVVRRAEMLG
                     ELMRLKWSIAVGGTHGKTTTTSMVAAVLDAGGLDPTVINGGIINAYGTNARLGAGDWM
                     VVESDESDGSFLRLPATIAVVTNVDPEHLDHYGTFDALRDAFVRFVENIPFYGFAVLC
                     SDHPEVQALIPRVADRRIITYGLGANADVRAINLRLDRGGADFDVMIENRATNESRTI
                     IGLRLPMFGQHNVQNALAAIAVAQEMGLPDETIRRALGAFAGVKRRFTKTGEAHGITV
                     IDDYGHHPVEIAAVLRAARQAYGGSGRVIAVMQPHRYTRLSSLKAEFATCFTDADAVL
                     IADVYAAGETPIDGVNRDMLVGLVQRAGHRDVTPLGGPGDLPGLIWQAARPGDVVVCL
                     GAGNITAWAHALPGQIQQLAAEHAGPRAIANDPGPLNSGSAA"
     gene            3098..4036
                     /gene="murB"
                     /locus_tag="VF991_20190"
     CDS             3098..4036
                     /gene="murB"
                     /locus_tag="VF991_20190"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEX9558826.1"
                     /translation="MALATSHAHLIDRLPKPRGRLVADAPLGPQTWFRTGGPAEVLFR
                     PADPEDLATFLSALPADVPVTVLGVGSNLLVRDGGVKGVVIRLMRGFTAIAVDGNEVL
                     AGAGAPDLNVALTARAHALTGLEFLSGIPGTIGGAVAMNAGAYGGELSEVLISAEAVD
                     RGGKLHPVMAAELGFGYRHVSAPADWIFTSVRLKAQPGDPAEIARRITEIDAARTESQ
                     PRSRTGGSTFVNPPGHKAWELIDQAGCRGLRIGQAQVSEKHCNFLINRGAATASDIET
                     LGEEVRRRVLENSGVRLDWEIRRIGVLAPVLSGAER"
     gene            4033..4965
                     /locus_tag="VF991_20195"
     CDS             4033..4965
                     /locus_tag="VF991_20195"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEX9558827.1"
                     /translation="MSRKVAVLMGGWSPEREVSLVSGKACAAGLRDGGHDVVEYDVKR
                     DLRALVDFLRPAGGGGPDVVFNALHGKYGEDGCIQGVLEILAVPYTHSGVLASAIAMD
                     KPMARHVFTSLGLRVAPGKVIERRSLAAGDPMPRPYVVKPIDQGSSVGVHIVREGDNL
                     AAVEVAEAAFGETVLVEQFVPGRELTVAVMDDRAVAVTELRPRTRFYDYEAKYTDGIT
                     EHLVPAPIPAEVYELARQWALTAHQALGCSGLSRADLRWDDSKTGTTGLVLLELNTQP
                     GMTPLSLAPEQAKWAGISWPELMTWMVDHARQPI"
     gene            4962..5828
                     /locus_tag="VF991_20200"
     CDS             4962..5828
                     /locus_tag="VF991_20200"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HEX9558828.1"
                     /translation="MSAAPNKTPVRRRDYDRRKKRGPIRKTGRPFWQKPMLLGLAVLL
                     MGSGGGGGWWAWREGWLVEARNRLEVVSRSVVGAITPFKLADVTVEGRDYVERSAILA
                     ALDVKPGDSLLGIDLQASRQKLEAIDWVASATVERRLPDTLYVTLKERRAVAIWQNSG
                     EYTLIDRDGRTVRASRMPPGAETLLLLGGAGAPEHVGELLLLLAYEPAVVRQLRAAVW
                     VGQRRWNLILNNGVEIWLPEEDAVAALKQLAKLDTQHKLLSREFGIVDLRLPDKLYLK
                     KRSSGEPMQGPA"
     gene            5874..7109
                     /gene="ftsA"
                     /locus_tag="VF991_20205"
     CDS             5874..7109
                     /gene="ftsA"
                     /locus_tag="VF991_20205"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEX9558829.1"
                     /translation="MAKARNGVIAALDIGTSKVVCFVARVDGQGLRVVGIGHQPAQGM
                     RSGNIVDMEAATRAISSAVSTAEEMCGEHVREVIVGVSGGSAASHNQSLDVAIGHHEI
                     GERDVRRVQQHIHLPAETADRDIIHSEAIGYSVDGTAVRDARGMFGERLGVDVHLVTA
                     ASGAMRNLQVCVRRAHLEIADRVVAAHAAGLSSLVSDERDLGVTLIDMGGGTTSIAVF
                     YEGHLVHVDTIPVGGEHVTRDIARGLSTPLAHAERMKTQIGRAVAKPNDEYDIIDVPL
                     IGEEDRTRPNHIPRSILVGIIRPRIEETFELVRNRLEASGVDKLAGGRAVIVGGACQL
                     DGVPDVGAAILNKKVRTGGPLRLAGLADSTGGPAFSAAAGLLTFALHHHAAAQAQPVA
                     MEAPSSRIGRIGSWIRENF"
     gene            7255..>7863
                     /locus_tag="VF991_20210"
     CDS             7255..>7863
                     /locus_tag="VF991_20210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEX9558830.1"
                     /translation="MTINLSLPQKESEIKPRITVIGVGGAGGNAVNNMISAALEGVEF
                     IVANTDAQALGQSLADRRVQLGITITQGLGAGARPEVGRQAAEEALPEILQLLDGANM
                     VFVTAGMGGGTGTGAAPVIAAAAREQGILTIGVVTKPFHFEGRRRMQSAEQGILELEK
                     VVDTLIVIPNQNLFKIANEKTTFADAFKMADDVLHMGVRGVTD"
BASE COUNT         1198 a         2770 c         2682 g         1213 t
ORIGIN      
        1 gttcggccac gtgcgcagcc gcttcgaccg cttcctcgat ccctcgtcgg gcgacaacta
       61 ccaggtcaac acctcgctcg aagcgttcat gaacggctcg ctgttcggcc gcggcccggg
      121 cgagggcacg gtgaaggcgc agcttcccga cgcccacacc gatttcgtga tggccgtcgc
      181 cggcgaggaa ttcggcctga tcgtctgcct gatgatcctc gccttgttcg ccttcgtgac
      241 cctgcgcgcg ctgtcacgcg cctcgaagga gaccagcctg ttcatcaccc tggcggcgac
      301 cgggttggcc gtgcagttcg gcctgcaggc ggccatcaac atggcctcga ccatccagct
      361 cattcccgcc aagggcatga ccctgccgtt catttcctat ggcgggtcct cggcactggc
      421 gatggcgatc tgcgtcggca tgatgctgtc gctcacccgc gagcatgccg ggttgaggga
      481 ggcggtgtga tggaaccgcg tcccccccat gggcctgtcg tcctggcggc cggcggtacc
      541 ggcgggcacg tgttccccgc cgaggcgctg gccggcgagc tcgaggcgcg cggcgtgccg
      601 ttcacactgg tcaccgattc gcgcggccgg cagtggcagg gcgcgctggc gcatcggccg
      661 atccactaca tccattcggc cagccccacc ggctcgctgg gccagcgcct gcaagcgatg
      721 atggcgctgg ggcgcggcct gttcgacgcc tggtgggcgc tcggccgcat cggcccgtcg
      781 gccgtcgtcg gcttcggcgg ctatgcctcg gtgccgacca tgatcgccgc ccgcctgcgc
      841 cggctgccgt cgatgctgca cgagcagaat gccgttttgg gcaaggccaa ccgactcgtg
      901 ctgggtgggg cggcgcgggt cgcgacctcg ttcgcccgca cccgctacat ccccgagaac
      961 gaccaccgcg cgcgcgtcgt cggcaatccg gtgcgcgagt cggtgcgtgc cttgcgcagc
     1021 tcgccctatc gcgcgcccgg cgagggccgg gtgttcgatc tcctggtctt cggcggcagc
     1081 cagggcgcgg cctcgttcag ccaggtcgtg cccgatgccg cgctgtccct gccggcggcg
     1141 ctgcgtcagc gcctgcgcct ggtccagcag tgccggccgg aagatctcga tcgggtgcgc
     1201 cggagctacg cccgcgccgg catcgtggtc gagctggcgc cgttcttcgc cgacctgccg
     1261 cagcgcctcg ccgccgccca tctggtgatc ggccgcgccg gtgcctcgac cgtggccgag
     1321 ctcgccacca tcggccggcc gtcgatcctg gtgccctatc cctatgccgc cgacgatcac
     1381 cagaccgcca atgcccgtgc cttcgaagcc gccggcgcct gcatcgtgat cccgcacgcc
     1441 gccttcaccg cggccgccct ggccggacat ctgacggcgc tgatcgagac gccgcagcgc
     1501 ctcgccgaca tggccgccgc cgcgcacgcc gccggccgtc ccgacgccgc ggcgcgcctt
     1561 gccgacctgg tcggcgaaat ggcgaccggt cccatccttt cgccgtcagg agtcgccgca
     1621 tgagggcgct gccgctcgat atcggtctca tccatttcgt cggcatcggc ggcatcggca
     1681 tgtccggcat cgccgaggtg ctgcacaatc tcggctacag ggtgcagggc agcgacctct
     1741 ccgaaggcgc caacacgcgc cggctggccg agctcggcat caaggtcgcg atcggccatc
     1801 gcgccgacaa catcgccaac gcccaggtcg tggtcgtgtc gagcgcggtc aagaaggaca
     1861 atcccgaggt gctggccgcg cgggcacggc tggtgccggt ggtgcgccgc gccgaaatgc
     1921 tgggcgagct gatgcgtctc aaatggtcga tcgcggtcgg cggcacgcat ggcaagacca
     1981 cgacgacatc gatggtcgcc gccgtgctcg acgccggcgg gctcgacccg acggtgatca
     2041 acggcggcat catcaatgcc tacggcacca atgcccggct gggcgccggc gactggatgg
     2101 tggtggagtc ggacgaatcg gacggctcgt tcctgcgcct gccggcgacc atcgccgtgg
     2161 tcaccaacgt cgatcccgag catctcgacc attacggcac gttcgatgcc ctgcgcgacg
     2221 ccttcgtgcg cttcgtcgag aacatcccgt tctacggctt cgccgtttta tgctccgacc
     2281 atcccgaggt gcaggcgctg atcccacggg tcgccgaccg gcgcatcatc acctacggcc
     2341 tcggcgccaa tgccgacgtg cgcgcgatca acctccggct cgaccgcggc ggcgctgatt
     2401 tcgatgtcat gatcgagaac cgcgcgacca acgaatcgcg caccatcatc ggtctgcgcc
     2461 tgccgatgtt cggccagcac aacgtgcaga atgcgctggc cgccatcgcc gtggcgcagg
     2521 aaatgggact gcccgacgag accatccgcc gtgccctcgg cgccttcgcc ggcgtcaagc
     2581 ggcgcttcac caagaccggc gaggcgcacg gcatcaccgt gatcgacgac tacggccacc
     2641 atccagtcga gatcgccgcc gtgctgcgcg cggcgcgtca ggcctacggc ggctcgggac
     2701 gggtgatcgc ggtcatgcag ccgcaccgtt acacccggct gtcctcgctc aaggccgagt
     2761 tcgcgacatg cttcaccgac gccgacgccg tgctgatcgc cgacgtctat gccgccggcg
     2821 agacgccgat cgacggcgtc aaccgcgaca tgctggtcgg gctggtgcag cgcgccggcc
     2881 atcgcgacgt cacgccgctc ggcgggccgg gcgacctgcc cgggctgatc tggcaggcgg
     2941 cgcggccggg cgacgtcgtg gtctgcctgg gtgccggcaa catcacggcg tgggcgcatg
     3001 cgctgcctgg ccagatccag cagctcgccg ccgagcacgc cggcccgcgc gccatcgcca
     3061 acgatcccgg ccccctcaac agcggttcgg cggcatgatg gcgctggcga cctcgcacgc
     3121 tcatctcatc gaccggctgc ccaagccgcg cggccggctg gttgccgacg cgccgctcgg
     3181 cccgcagacc tggttccgca ccggcggacc ggccgaagtg ctgttccggc cggccgatcc
     3241 ggaggatctc gcgaccttcc tgagcgcgct gcccgccgac gtgccggtca ccgtgctggg
     3301 cgtcggctcg aacctgctgg tgcgcgacgg cggcgtgaaa ggcgtggtga tccgcctgat
     3361 gcgcggcttc acagccatcg cggtcgacgg caacgaggtg ttggccggcg cgggcgcgcc
     3421 cgatctcaat gtcgcgctga cggcgcgcgc ccatgcgctg accgggctgg agttcctgag
     3481 cggcatcccc ggcaccatcg gcggcgccgt ggcgatgaat gccggcgcct atggcggcga
     3541 gctgagcgag gtcctgatat cggccgaagc cgtcgaccgc ggcggcaagc tgcaccctgt
     3601 catggccgcc gaactcggct tcggctaccg tcatgtcagc gcgccggccg actggatctt
     3661 cacctcggtc cggctcaaag cccaaccggg cgatcccgcc gagatcgccc gccgcatcac
     3721 cgagatcgac gccgcccgca ccgaatcgca gccgcgcagc cgcaccggcg gctcgacctt
     3781 cgtcaatccg cccggccaca aggcgtggga actgatcgac caggccggct gccgcggctt
     3841 gcgcatcggc caggcgcagg tctccgagaa gcattgcaac ttcctgatca atcgcggcgc
     3901 cgccaccgcg tccgacatcg agacgctggg cgaggaggtg cgccggcgcg tgctcgaaaa
     3961 cagcggcgtg cgtctcgact gggagatccg ccgcatcggg gtactcgcac ctgttctgag
     4021 cggagccgaa cgatgagccg caaggtcgcg gtcctgatgg gcggctggtc gcccgagcgc
     4081 gaggtctcgc tggtgagcgg caaggcctgc gccgccgggc tgcgcgacgg cggacacgat
     4141 gtcgtcgagt acgacgtcaa gcgcgacctg cgcgcgctgg tcgatttcct gcggcctgcc
     4201 ggcggcggcg gccctgacgt cgtgttcaac gccctgcacg gcaagtacgg cgaggatggc
     4261 tgcatccagg gcgtgctcga gatcctggcg gtgccctaca cccattccgg cgtgcttgcc
     4321 tcggcgatcg ccatggacaa gccgatggcg cgccacgtct tcacctcgct cggcctgcgc
     4381 gtcgcccccg gcaaggtgat cgaacgccgc tcgctggccg ccggcgatcc catgccgcga
     4441 ccctatgtcg tgaagccgat cgaccagggt tccagcgtcg gcgtgcatat cgtgcgtgag
     4501 ggcgacaatc tcgccgcggt cgaagtggcc gaggcggcgt tcggcgagac ggtgctggtc
     4561 gaacagttcg tgcccggccg cgagctcacc gtggcggtga tggacgatcg cgccgtcgcc
     4621 gtcaccgagc tgcgcccgcg cacgcgcttt tacgactacg aggccaagta caccgacggc
     4681 atcaccgagc atctcgtgcc ggcgccgatc ccggccgagg tctacgagct cgcccggcag
     4741 tgggcgctga ccgcccacca ggcgctgggc tgcagtggtc tcagccgcgc cgacctgcgg
     4801 tgggacgatt ccaaaaccgg cacaacgggc ctggtcctcc tcgaactcaa cacccagccc
     4861 ggcatgacgc cgctgtcgct ggcgcccgag caggccaagt gggccggcat ctcgtggccc
     4921 gaactcatga cttggatggt cgatcacgcg aggcagccga tatgagcgcc gcgccgaaca
     4981 aaacgcccgt ccggcggcgc gactacgacc gccgcaagaa gcgcgggccg atccgcaaga
     5041 cgggccgtcc gttctggcaa aagccgatgc tgctcggcct tgccgtgctg ctgatgggca
     5101 gcggcggcgg cggcggctgg tgggcgtggc gcgagggctg gcttgtcgag gcgcgcaatc
     5161 gcctcgaggt cgtctcgcgc agcgtcgtcg gcgcgatcac gcccttcaag ctggccgacg
     5221 tcaccgtcga aggccgcgac tatgtcgaac gcagcgccat cctggccgcg ctcgacgtca
     5281 agccgggcga ttcgttgctc ggcatcgacc tgcaggcctc gcgccagaag ctcgaggcga
     5341 tcgactgggt ggcgagcgcc accgtcgagc gccgcctgcc cgacacgctc tatgtgacgc
     5401 tgaaggagcg ccgtgccgtc gccatctggc agaacagcgg cgaatacacc ctgatcgacc
     5461 gcgacggccg cacggtgcgc gccagccgca tgcccccagg cgccgagacg cttctgctgc
     5521 tgggcggcgc cggcgcgccc gagcatgtcg gcgagctgct gctgctgctg gcctacgagc
     5581 ccgccgtcgt ccgccagctg cgcgccgccg tgtgggtcgg ccagcggcgt tggaatttga
     5641 tcctgaacaa cggcgtcgag atctggctac ccgaagagga cgcggttgcc gcgctaaagc
     5701 agctcgccaa gctcgacacc cagcacaaat tgttgtcgcg cgagttcggc attgtcgatc
     5761 tcaggctgcc ggacaagcta tatctcaaga aacgcagctc gggcgagccg atgcaagggc
     5821 cggcgtaagt ggcggcgaaa cctcaagtgt acgcgtagcg acgggggaac aacgtggcga
     5881 aggcaagaaa cggtgtgatt gcggcgctcg atatcggtac cagcaaggtc gtttgtttcg
     5941 tggcccgcgt cgacggccag ggactgcggg tggtcggcat cggccatcag ccggcccagg
     6001 gcatgcgctc gggcaatatc gtcgacatgg aggcggccac ccgcgccatc tcgtcggcgg
     6061 tgtcgacagc cgaggagatg tgtggcgagc atgtgcgcga ggtcatcgtc ggcgtgagcg
     6121 gcggttccgc cgcttcgcac aaccagagcc tcgatgtcgc gatcggccac cacgagatcg
     6181 gcgagcgcga cgtgcggcgg gtccagcagc acatccacct gccggccgaa acggcggacc
     6241 gcgacatcat ccattccgag gcgatcggct attcggtcga cggcacggcg gtgcgcgacg
     6301 cgcgcggcat gttcggcgag cggctgggcg tcgacgtgca tctggtcacg gcggcgagcg
     6361 gcgcgatgcg caacctgcag gtctgcgtgc gccgcgccca tctcgagatc gccgatcgcg
     6421 tcgtggcggc ccacgccgcg gggctgagct cgctggtgtc tgacgagcgc gacttgggcg
     6481 tcaccctgat cgacatgggc ggcggcacga cctcgatcgc cgtcttctac gaaggccatc
     6541 tggtgcatgt cgacaccatc ccggtcggcg gcgagcacgt cacccgcgac atcgcccgtg
     6601 ggctgtcgac accgcttgcc catgccgagc gcatgaagac ccagatcggc cgcgccgtcg
     6661 ccaagcccaa cgacgagtac gacatcatcg acgtgccgct gatcggcgag gaggatcgca
     6721 cgcggcccaa ccacatcccg cgctcgatcc tggtcggcat catccgtccg cggatcgagg
     6781 agaccttcga actggtgcgc aaccggctcg aggccagcgg tgtggataag ttggccggcg
     6841 gacgggcggt gatcgtcggc ggtgcctgtc agctcgacgg cgtgcccgat gtcggggcgg
     6901 cgattctcaa caaaaaggtg cgtaccggcg gtcccctgcg acttgccggg ctggctgatt
     6961 cgactggcgg gccggccttt tcggcggccg cgggcctgct caccttcgcg ctccatcatc
     7021 atgccgccgc gcaagcacaa ccggtcgcta tggaggcgcc atcgagtcga atcgggcgga
     7081 ttggcagttg gattagggag aacttttagg caatatgttg tgtggggata ggcagtcccc
     7141 acaggctgtt gagataagaa gtaagaaaag ccggtggtgg tgaagggtct ctctagaaac
     7201 ggcccgcgcc gtcgctccga gcagataacc ccctcgtttg cgtggagaag cctaatgaca
     7261 atcaacctca gtctccccca aaaggagtcc gagattaagc cgcgtatcac cgtcattggc
     7321 gtcggtggcg caggcggaaa cgccgtcaac aacatgatca gcgccgcgct ggaaggcgtg
     7381 gaattcatcg tcgccaacac cgacgcgcag gcgctcggcc agtcgctcgc cgaccgccgc
     7441 gtccagctcg gcatcaccat cacccagggc ctgggggcgg gggcgcggcc cgaggtcggc
     7501 cgccaggcgg cggaagaagc gttgccggag atcctgcaac tgctcgacgg cgccaacatg
     7561 gtgttcgtca ccgccggcat gggcggcggc accggtacgg gggccgcgcc ggtcatcgcc
     7621 gcggcggcgc gcgagcaagg catcctcacc atcggcgtgg tcaccaagcc gttccacttc
     7681 gagggtcgcc gccgcatgca gtcggccgag cagggcatcc tggaactgga gaaggtggtc
     7741 gacacgctga tcgtcattcc caaccagaac ctgttcaaga tcgccaacga gaagacgacc
     7801 ttcgccgacg ccttcaagat ggccgacgac gtgctgcaca tgggcgtgcg cggcgtcacc
     7861 gac
//
LOCUS       DASWGA010000872         2374 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_627642, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000872 DASWGA010000000
VERSION     DASWGA010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627642"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..940)
                     /locus_tag="VF991_20215"
     CDS             complement(<1..940)
                     /locus_tag="VF991_20215"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558831.1"
                     /translation="MAEAATGADAAGHRSIESRASWRAAFMTLAILSISFGSTLLIVV
                     GMKPMQEALGTERAALALAGSLLWIGTGAGGILMGWLADRIGLRTTVAIGACMIAGGL
                     ALSSTGPLWALYIGQGLMVGFLGSGGVYPPLLVYVSRWFDRRRGTAIALISSGQYVAG
                     VVWPSVFERGISGVGWQATMLAYAGVVLVVILPLTLMLRPAPIPPAPPRQPALMAARR
                     HRVAGLHPNVVQALLCLAGFCCCIPMSVPQAHLVAFCSDIGISPARSAVMLSVMLASA
                     FLARQAWGALADRIGGLRTILAGSAFQAVTIACFLLT"
     gene            1039..2004
                     /locus_tag="VF991_20220"
     CDS             1039..2004
                     /locus_tag="VF991_20220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558832.1"
                     /translation="MRWTMKFLLAMTALAALSAPATAQSWPTKPVRIVVPFGPGGPAD
                     VYARILGQELGEVLKQQFVVENKAGAGGTIGADIVAKAAPDGYTLLMMSNTLTTNETL
                     LANKPYVLMRDLVAVAPVNSSDLVMVVSPSVKAKTLPELIALAKAEPGKLAYASAGPG
                     TPYHLAGELFKTMTGTDILHVPHKNSGEARNDVMGGHVQIMFDAVTAMKGNIDAGQVR
                     ALGTTGERRSAVLPDVPTMSEAVPGYETTIWLGIMAPKGTPPEIVERLNAEIAKIMAK
                     PAIREAWAKQGAVPMTMTPAQFDTYLKGDIDKWAKVIQQAGIKAQ"
     gene            2001..>2374
                     /locus_tag="VF991_20225"
     CDS             2001..>2374
                     /locus_tag="VF991_20225"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX9558833.1"
                     /translation="MKSVRVLSGGAAQGLVEVLRPSFEAKTGWRIDGAFGAVGGMTAR
                     LLAGEPADVMILSRALIDGLARDGHVVAASAKDIGAVQTAIAVRRGDPRPAVASAAEL
                     RAALLGADAIHLPDPEQATAGI"
BASE COUNT          425 a          817 c          824 g          308 t
ORIGIN      
        1 gggtcagcag gaagcaggcg atggtgaccg cctggaaggc cgacccggcc aggatcgtgc
       61 gcaacccgcc gatccgatcg gcgagcgcgc cccaggcctg gcgcgcgagg aaggccgagg
      121 ccagcatcac cgacagcatg accgcgctgc gggcggggct gatgccgatg tcgctgcaga
      181 aggccacgag atgggcctgg ggcaccgaca tgggaatgca gcaacagaag cccgcgaggc
      241 agagcagcgc ctgcacgacg ttgggatgca ggccggcgac gcgatggcgg cgcgccgcca
      301 tcaacgcagg ctgccgtggc ggcgccggcg ggatcggcgc gggccgaagc atcaaggtca
      361 gcggaagaat gacgaccagc acgacgccgg cataggccag catggtggcc tgccagccaa
      421 cgcccgagat gccgcgctcg aacaccgacg gccagaccac gccggcgaca tactggcccg
      481 acgagatcag ggcgatcgcc gtgccccgcc ggcggtcgaa ccagcggctg acatagacca
      541 gcagcggcgg atagacgccg ccgctgccta aaaacccgac catcagcccc tggccgatat
      601 agagggccca gagcgggccg gtcgaggaaa gggcgaggcc gcccgcgatc atgcaggcgc
      661 cgatggcgac ggtggtgcgc agcccaatgc ggtcggccag ccagcccatc aggattccgc
      721 cggcgccggt gccgatccaa agcagcgagc cggcgagcgc cagcgccgca cgctcggtcc
      781 ccagcgcctc ctgcatcggc ttcatgccaa ccacgatcaa cagcgtcgag ccgaacgaga
      841 tcgacaggat ggcgagcgtc atgaaggccg cccgccacga tgcgcggctt tcgatgctgc
      901 ggtgccccgc agcgtccgcg ccggtcgcgg cctcggccat tcccccccaa ctcctgttct
      961 ttgttgtctc cgttctagtc tgttcgattt gccgcggcca tggcatcact ggggcaacga
     1021 taatcctggg aggctgacat gcgctggacg atgaagttcc ttctcgcaat gaccgcactt
     1081 gcggcactgt cggcgccggc caccgcgcaa tcatggccga ccaagccggt gcgcatcgtc
     1141 gtgccgttcg gccccggcgg tccggccgac gtctatgccc gcatcctggg ccaggagctg
     1201 ggcgaggtgc tgaagcagca gttcgtggtc gagaacaagg cgggcgcggg cggcacgatc
     1261 ggcgccgaca tcgtcgccaa ggccgcgccc gacggctaca cgctgctcat gatgtccaac
     1321 acgctgacca ccaacgagac gctgctcgcc aacaagcctt atgtgctgat gcgcgacctc
     1381 gtggcggtgg cgccggtcaa ttcatcggac ttggtgatgg tggtctcgcc ctcggtgaag
     1441 gccaagacgc tgcccgagct catcgcgctc gccaaggccg agcccggcaa gctcgcctat
     1501 gcctcggccg ggccgggcac gccctatcac ctggcgggtg agctgttcaa gaccatgacc
     1561 ggcaccgata tcctccacgt gccgcacaag aacagcggcg aggcgcgcaa cgacgtgatg
     1621 ggcggccatg tgcagatcat gttcgatgcc gtcaccgcga tgaagggcaa catcgatgcc
     1681 ggccaggtgc gcgcgctcgg caccacgggc gagaggcgct cggccgtgct gcccgacgtg
     1741 ccgacgatga gcgaggccgt gccgggctac gagaccacga tctggctcgg catcatggcg
     1801 cccaagggga caccgccgga gatcgtcgag cggctgaatg cggagatcgc caagatcatg
     1861 gccaagccgg cgatccgcga ggcctgggcc aagcagggcg cggtgcccat gaccatgacg
     1921 ccggcgcagt tcgacaccta cctcaagggc gacatcgaca agtgggccaa ggtcatccag
     1981 caggccggca tcaaggcgca gtgaagagcg tcagggtcct gagcggcggc gcggctcaag
     2041 gtctggtcga agtccttcgc ccgtcgttcg aagccaagac cggctggagg atcgacggcg
     2101 ccttcggcgc ggtgggcggc atgacggccc gcctgctggc gggcgagccg gccgacgtca
     2161 tgatcctgag ccgcgccctg atcgatgggc tggcgcgcga cggccacgtc gtggcggcgt
     2221 cggccaagga tatcggcgcc gtccagaccg ccatcgccgt gcgacgcggc gatcctcggc
     2281 ccgcggtcgc cagcgcggcc gaattgcgcg cggcactgct tggcgccgac gccatccact
     2341 tgcccgatcc cgaacaggcg accgccggca tcca
//
LOCUS       DASWGA010000873         2620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2381796, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000873 DASWGA010000000
VERSION     DASWGA010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2381796"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1988)
                     /locus_tag="VF991_20230"
     CDS             complement(<1..1988)
                     /locus_tag="VF991_20230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HEX9558834.1"
                     /translation="MIAGLIRWSARNLLLIFVGTLALTGGGLYAVGRVSLDAIPDLSD
                     TQVIVYTEMPGQAPQVVEDQVTYPLTTAMLAVPRSRAVRGFSFFGVSFVYIIFEDGTD
                     IYWARSRVLEYLNSGAQKLPADVKPTLGPDATGVGWVYQYVVVGANRTLAELRSLQDW
                     YIRFGLAKAEGVAEVASVGGFVRQYNVVVDPAKLRSFGVPLGRVIAAIRASNREVGGR
                     VVEMAETKFMVRGRGYIKSTADLEHIVLRADGPVPVLLRDVARVEFGPDERRGVAELD
                     GEGDVVSGIVLQRFGQNALDVIANVKAKVKEIAAGLPEGVRIEPVYDRSDLIHRAIDT
                     LIRTLVEESVVVALVCFVFLLHARSALVAIVTLPIGVLMAFLAMHLVGIGSNIMSLGG
                     IAIAIGAMIDAAIVMIENAHKHLERLKPGQSRSEAIIAAAVEVGPALFFSLLVITVSF
                     LPIFTLEAQEGRMFKPLAWTKSLSMAAAALLSVTLVPALMLLFVRGRILPERRNPVNR
                     VLIWLYRPAIDLVLRARLLTIALALAALAVTAWPAMRIGSEFMPALDEGTLFYMPTTL
                     PGLSVTKSAELLQTQDKIIRSFPEVASVYGKGGRAGTATDPAPLEMFETVINLKPKSQ
                     WRAGMNVDSLITELDRALQFPGVSNAWTMPIKARTDMLA"
     gene            complement(1985..>2620)
                     /locus_tag="VF991_20235"
     CDS             complement(1985..>2620)
                     /locus_tag="VF991_20235"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9558835.1"
                     /translation="LEKLRRGERPPRTIAVPAPTAGTVVEKMAVEGMRYQPGETLFRI
                     VDTSTMWVLAEVYEQDLAFVKVGDMAKVTVNTWPDRSFPGRVTFIYPSVGKESRTAKL
                     RIEVANPGGLLRADMAATVEIEGPIAGRWVAVPDSAVIDSGKRQIVLVERGEGRYEPR
                     PVKLGARVPGYVQVLEGLKPGERIVTSATFLIDAESNLRAALGAFTAGDGK"
BASE COUNT          437 a          887 c          894 g          402 t
ORIGIN      
        1 gccagcatgt cggtgcgggc cttgatcggc atggtccacg cattgctgac gccggggaac
       61 tgcaatgccc ggtcgagctc ggtgatcagg ctgtcgacgt tcatgcccgc ccgccactgc
      121 gatttgggct tgaggttgat caccgtttcg aacatctcga gcggcgcggg atcggtggcg
      181 gtgccggcgc ggccgccctt gccgtagacc gaggccacct cggggaacga ccggatgatc
      241 ttgtcctgag tctgcagcag ctcggccgac ttggtgacgg agaggccggg cagggtggtc
      301 ggcatgtaga acagcgtgcc ctcgtcgagg gccggcatga actcgctgcc gatccgcatc
      361 gccggccacg cggtgacggc cagcgccgcc agcgccagag cgatcgtgag caggcgtgcc
      421 cgcaacacca gatcgatggc cggccggtac agccagatca gcacccgatt cactggattg
      481 cggcgctccg gcaggatgcg gccgcgcacg aacagaagca tcaacgccgg caccagcgtg
      541 acagacagca gcgccgccgc cgccatcgac aggctcttgg tccaggccag cggcttgaac
      601 atccggccct cctgcgcctc gagcgtgaag atcggcagga acgacacggt gatgaccagc
      661 aggctgaaga acagggccgg accgacctcg accgccgccg cgatgatcgc ctcgctgcgc
      721 gattgaccgg gcttcagccg ttccagatgc ttgtgggcgt tctcgatcat gacgatggcg
      781 gcgtcgatca tggcgccgat ggcgatggcg atgccgccga ggctcatgat gttggagccg
      841 atgcctacga ggtgcatggc caggaacgcc atcagcacgc cgatcggcaa ggtgacgatt
      901 gccaccagcg ccgagcgcgc atgcagcagg aacacgaagc agaccagcgc caccacgacg
      961 ctctcctcga ccagcgtgcg gatgagcgtg tcgatggcgc gatggatcag gtcggagcgg
     1021 tcgtagaccg gctctatgcg cacgccctcc ggcaggccgg ctgcgatctc cttcaccttg
     1081 gccttgacgt tggcgatcac gtcgagcgca ttctggccga agcgctgcag gacgatgccg
     1141 ctcaccacgt cgccttcgcc gtcgagctcg gcgacgccgc gccgttcgtc agggccgaac
     1201 tcgactcgcg caacatcgcg cagcaggacg ggcaccggcc cgtcggcgcg cagcacaatg
     1261 tgctcgaggt ccgccgtgct cttgatatag ccgcgaccgc gcaccatgaa cttggtctcg
     1321 gccatctcga cgacccggcc gccgacctcg cggttggagg cgcggatcgc cgcgatgacg
     1381 cggccgagag gcacgccgaa gctgcgcagc ttcgccggat cgaccacgac gttgtattgc
     1441 cgcacgaagc caccgacgct cgccacctcg gccacgccct cggccttggc gaggccgaag
     1501 cggatgtacc agtcctgcag cgagcgcagc tcggccagcg tgcgattcgc gccgaccacg
     1561 acgtattgat agacccagcc gacgccggtc gcgtcggggc ccagggtcgg cttgacgtcg
     1621 gccggcagct tctgggcgcc cgagttgagg tattccagca cgcggctgcg cgcccagtag
     1681 atgtcggtgc cgtcctcgaa gatgatgtag acgaacgaca cgccgaagaa ggagaagccg
     1741 cgcacggcac ggctgcgggg caccgccagc atcgccgtgg tcagcggata ggtgacctgg
     1801 tcctcgacca cttgcggcgc ctggcccggc atctcggtgt agacgatcac ctgggtgtcg
     1861 gagaggtcgg ggatggcgtc gagcgagacg cggccgacgg catagagtcc gccgccggtg
     1921 agcgccagcg tgccgacgaa gatcagcaga aggttgcgcg ctgaccagcg gatgaggccg
     1981 gcgatcattt gccgtctccc gcggtgaacg ctccgagggc ggcccgaagg ttgctctcgg
     2041 cgtcgatcag gaaggtggcc gacgtgacga tgcgctcgcc cggcttcagc ccttccagca
     2101 cctgcacata gcctggtacg cgcgccccga gtttcaccgg ccgcggctcg tagcggccct
     2161 cgccgcgctc gaccagcacg atctggcgct tgccgctgtc gatgaccgcc gagtcgggca
     2221 ccgcgaccca tcggcccgca atgggcccct cgatctcgac cgtggccgcc atgtcggcac
     2281 gcagcagccc accaggattg gcgacctcga tgcggagctt cgccgtgcgg ctttccttgc
     2341 cgacgctggg atagatgaag gtcacgcgtc cggggaagga tcggtcgggc caggtgttga
     2401 ccgtgacctt ggccatgtcg cccaccttca cgaaggcgag gtcctgctcg tagacctcgg
     2461 ccagaaccca catggtcgac gtatcgacga tgcggaacag cgtctcgccg ggctggtagc
     2521 gcatgccctc gaccgccatc ttttccacga ccgtgccggc cgtcggcgcg ggcacggcga
     2581 tggtgcgcgg cgggcgttca ccgcggcgca gcttctcgag
//
LOCUS       DASWGA010000874         1821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2240646, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000874 DASWGA010000000
VERSION     DASWGA010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2240646"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..578
                     /locus_tag="VF991_20240"
     CDS             <1..578
                     /locus_tag="VF991_20240"
                     /inference="COORDINATES: protein motif:HMM:TIGR03317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HEX9558836.1"
                     /translation="LEVAVAYGPDAAETLPIDGVIGFVDPRLAELGLRVIAPTGTAAS
                     ALQSRGFSAAPIEAYDALRLQFGVPDGSRDLIVEKALLLENGFDELNGVDWQKGCYMG
                     QELTARTKYRALIRKRLFPVRIEGVLPAPGTAIFNDGQEVGELRSGSGERALAMLRLD
                     AVKPGQKLTAGGAGILPEIPGWMRLPETTDP"
     gene            639..>1821
                     /locus_tag="VF991_20245"
     CDS             639..>1821
                     /locus_tag="VF991_20245"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9558837.1"
                     /translation="MNRINPNPFTTRPEIVGTFGVVASTHWIATAVGMAILERGGNAF
                     DAAVATAFTLQVVEPHLCGPGGDVPLILHDTRRNRTEVICGQGSMPAGATIAHYKGLG
                     LDLIPGTGMLPACIPGTFDAYMLLLRDYGTMRLADVLSSAIGYWLNGHPLAERASATI
                     ATVTEQFRTHWKTSAAVFMPDNKVPAPGSLFRNPTVGNTYARILKEAEAGSGGREAEI
                     ERARKTWSQGFIAEAIDKFCRTQEVMDVSGRHNKAVLTGHDMAKWQATVESPLTYDYG
                     RYTVCKAGTWTQGPVALQQLALLKGFDLDGMDPTSADFIHLQIECLKLAYADREAFYG
                     DPAFVDVPMKTLLSDAYNADRRKLVDAKHASLDQRPGKVDGYGGVVKLRRADGVRLGV
                     AA"
BASE COUNT          312 a          638 c          576 g          295 t
ORIGIN      
        1 agcttgaagt cgccgtggcg tacggccccg acgccgccga gacgctgccg atcgacggcg
       61 tcatcggctt cgtcgatccg cgcttggccg agcttggcct gcgcgtcatc gcgccgaccg
      121 gcactgccgc ttccgccctg cagtcgcgtg gcttctcggc ggcgccgatc gaagcgtatg
      181 acgctctgcg cctgcaattc ggcgtgcccg acggcagccg cgacctcatt gtcgagaagg
      241 cgctattgct ggagaacggc ttcgacgagc tgaacggcgt ggattggcag aagggctgct
      301 acatggggca ggaactgacg gcccgcacca agtaccgcgc tctgatccga aaacgcctgt
      361 tcccggtcag gatcgagggt gtcctgccgg cacccggtac ggccatcttc aacgatggcc
      421 aggaagtcgg cgaactgcgt tcgggctcgg gcgagcgcgc tcttgccatg ctgcgcctcg
      481 atgcggtgaa gccgggtcaa aagctgacgg cgggcggggc cggaattttg ccggagatcc
      541 ccggctggat gcggcttccc gagaccaccg acccctagcc gccccgccga gtcgggctta
      601 aggtcgcccc gcgccagaca tgcgaggaga gcggcccctt gaatcggatc aatcccaacc
      661 ccttcaccac ccgtcccgag atcgtcggca ccttcggcgt ggtcgcttcc acacactgga
      721 tcgccacggc ggtcggcatg gccatcctcg aacggggcgg caacgccttc gatgcggcgg
      781 tggccaccgc tttcaccctg caggtcgtcg agccgcatct ctgcgggccg ggcggcgacg
      841 ttccgctgat cctgcacgac acacgccgca accggaccga agtgatctgc ggccagggct
      901 cgatgccggc cggcgccacc atcgcccact acaagggtct cggcctcgat cttatccccg
      961 gcaccggcat gctgccggcc tgcattcccg gcaccttcga cgcctacatg ctgctgttgc
     1021 gcgactacgg cacgatgcgc ctcgccgacg tgctctcgtc ggccatcggt tactggctga
     1081 acggccatcc cctggccgag cgcgcctcgg ccaccattgc caccgtgacc gagcagttcc
     1141 gcacccactg gaaaacctcg gcggcagtgt tcatgccgga caacaaggtg ccggcgccgg
     1201 gttcgctgtt ccgcaatcca accgtcggca acacttatgc tcgcatcctg aaagaagccg
     1261 aagccggcag cggcggccgc gaagccgaga tcgagcgggc gcgcaaaacc tggagccaag
     1321 gcttcatcgc cgaggcaatc gacaaattct gccgcaccca ggaggtcatg gacgtctcgg
     1381 gccggcacaa caaggccgtg ctgaccggcc acgacatggc caagtggcaa gccacggtcg
     1441 agtcgccgct cacctacgat tacggccggt acactgtttg caaggcaggc acgtggacgc
     1501 agggcccagt ggctctgcag caactcgccc tgctcaaggg ttttgacctc gacggcatgg
     1561 acccgaccag cgccgatttc atccatctgc agatcgagtg cctgaagctc gcctatgccg
     1621 accgcgaggc cttttacggc gatccggcgt tcgtcgatgt tccgatgaaa accctcctgt
     1681 ccgacgccta caacgccgac cgtcgcaagc tggtggacgc caagcacgcc tccctcgacc
     1741 agcgtccggg caaggtcgac ggctatggcg gcgtggtgaa actgcgccgc gccgacggcg
     1801 tgaggctggg tgtggcggca a
//
LOCUS       DASWGA010000875         3873 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1497490, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000875 DASWGA010000000
VERSION     DASWGA010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3873
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1497490"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1259
                     /locus_tag="VF991_20250"
     CDS             <1..1259
                     /locus_tag="VF991_20250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007756331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HEX9558838.1"
                     /translation="TNGREIVNIMRRAFSLLRNGRGSPVIVELPADAYAEDAPDPLNY
                     EPVVVTKYGPDPAAVAEAAKVLMAAKRPVIYAGQGVHWAEAYAELRELAEFLAIPVCT
                     SLEGKSCFNETHPLALGSGGRAYPKAVRSFLDRSDVILGIGCSFTETNFGISMPQGKT
                     IIHATLDPAHLNKDVKIKYGLLGDAKLTLAALVAAAKAAGATKRDPSAIVAEIKSITD
                     EWLKEWMPKLTNNEAPLNPYRVLWDLQHTVDVANTIITHDAGSPRDQLSPFWRTTQPH
                     TYIGWGKTTQLGYGLGLAMGAKLAMPDKLCINVWGDAAIGFTGMDFETAVRERIPIMS
                     VLLNNFSMAIELHIMKVSTEKYRSTDISGDYAAMARAFGGYGERITKTEEIVPAIKRG
                     IEQTQKGVPVLLEFITSKEVTISVPK"
     gene            1281..2339
                     /locus_tag="VF991_20255"
     CDS             1281..2339
                     /locus_tag="VF991_20255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_263500017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:1668..1670,aa:Sec)
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEX9558839.1"
                     /translation="MTTILTPTAEHKVSAHDGLWMSAADAAKLTGWTLKPEGMCRDER
                     CVPLPAAAVKGNDVDVEAFWQKLGGPVIASQDGDVWALGAPADERNAALEGLQAPDFT
                     LPDIDGTPRSLSQLRGKKVFLATWASWUGCRLDLPVWQSLYDELKDKGFMVVAVAEES
                     RGAEHARPWIEQAKSSYWQLIDTEHRLSDLYNLVNVPQAVWIDEQGRIARPPETAGST
                     DHFRRMDLKTRTMSPEDQAERLAARQAYLDAVRAWVNTGKHALPADQARAGLPKVTQA
                     IAEARARFRLGVWLRDNGRTTEGDRQMNAASGLHPESWSMWRQAADLDEVGKASGPDF
                     WKRVQALGDRPYYPPPKL"
     gene            2641..3090
                     /locus_tag="VF991_20260"
     CDS             2641..3090
                     /locus_tag="VF991_20260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9558840.1"
                     /translation="MAVLNVNGKSVNTTADPRTPLLWVLREQLGLTGTKYGCGIAQCG
                     ACTVHIDGVATRSCQVPLNSVGAKKVVTIEGLAANGTLNKIQAAWVSLDVPQCGYCQS
                     GMVMAATALLAAKPKPTDADIDAAMTNICRCGTYQQVREAIHAAAKA"
     gene            3107..>3873
                     /locus_tag="VF991_20265"
     CDS             3107..>3873
                     /locus_tag="VF991_20265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9558841.1"
                     /translation="MTIQTSLGRKPLRRRGFLVSGAAVAGGFSLGFRIPIGDGAAHAA
                     EVKEINAWVVIHPDDKVVIRIARSEMGQGTLTGLAQLVAEELECDWNKVTTEYPTPGE
                     NLKRSRVWKNYSTGGSRGIRESNQYVREGGAVARQMLIAAAAAEWKVPANECTAANSI
                     VMHKSGKKLGYGHLAAAAAKLEPPKEVKLKDPKDWKIAGKPLKRLDTLPKLTGQMIYG
                     IDVRLPNMLTATVKACPVIGGKLKSFEAARVEKMPGV"
BASE COUNT          718 a         1314 c         1259 g          582 t
ORIGIN      
        1 tcaccaatgg ccgcgagatc gtcaacatca tgcgccgcgc cttcagcctg ctgcgcaacg
       61 gccgcggctc gccggtgatc gtcgagttgc cggccgacgc ctatgccgag gacgcgcccg
      121 atccgctgaa ctacgagccg gtggtcgtca ccaagtacgg gcccgatccg gcggcggtcg
      181 ccgaggccgc caaggtgctg atggccgcca agcgtcctgt catctatgcc ggccagggcg
      241 tgcactgggc cgaggcctat gccgagctga gagagctggc cgaatttttg gcgatcccgg
      301 tctgcaccag cctcgagggc aagagctgtt ttaacgaaac gcatccgctg gcgctggggt
      361 cgggcggccg cgcctatccc aaggcggtgc gaagcttcct cgaccgctcc gacgtcatcc
      421 tgggcatcgg ctgctcgttc accgagacca acttcggcat ctccatgccg cagggcaaga
      481 ccatcatcca cgccacgctc gatccggcgc atctcaacaa ggacgtcaag atcaagtacg
      541 gcctgttggg cgacgccaag ctgacgcttg ccgccctggt cgctgcggcc aaggcggccg
      601 gagcgaccaa gcgtgatccg tcggcgatcg tggccgagat caagtcgatc accgacgagt
      661 ggctgaagga gtggatgccc aagctcacca acaacgaggc gccgctcaat ccctaccgcg
      721 tgctgtggga cctgcaacat accgtcgatg tcgccaacac catcatcacc cacgacgccg
      781 gcagcccgcg cgaccagctc tcgccgttct ggcgcaccac gcagccgcat acctatatcg
      841 gctggggcaa gaccacgcag ctcggctacg ggctgggtct cgccatgggc gccaagctcg
      901 ccatgccgga caagctctgc atcaacgtgt ggggcgacgc ggcgatcggc ttcaccggca
      961 tggatttcga gacggcggtg cgcgagcgca ttcccatcat gtcggtgctg ctcaacaact
     1021 tctcgatggc gatcgagctg cacatcatga aggtctcgac cgagaagtac cgttcgaccg
     1081 acatctccgg cgactatgcc gccatggcgc gcgccttcgg tggctacggc gagcgcatca
     1141 ccaagaccga agagatcgtg cccgccatca agcgcggcat cgagcagacc cagaaaggtg
     1201 tgccggtgct gctcgagttc atcacgtcca aggaagtcac gatctcggtg ccgaagtaag
     1261 ccagcccgac ggaggtttcc atgaccacga ttctcacgcc aactgccgag cacaaagtct
     1321 cggcccacga cggcctgtgg atgagcgccg ccgacgccgc gaagctcacc ggctggacgc
     1381 tgaagcccga gggcatgtgc cgcgacgaac gctgcgtgcc cttgccggct gctgccgtga
     1441 aaggcaacga cgtcgatgtc gaggcttttt ggcaaaagct cggcggcccg gtgatcgcca
     1501 gccaggacgg cgacgtgtgg gcgctgggcg cacccgccga cgagcgcaat gccgcgctcg
     1561 agggcttgca ggcgcccgac ttcaccttgc cggatatcga tggcacgccg cgcagcctgt
     1621 cgcagctcag gggcaagaag gtctttctcg ccacctgggc cagttggtga ggctgccgct
     1681 tagacttgcc cgtgtggcag tccctctacg atgagctgaa ggacaagggt ttcatggtgg
     1741 tggccgtggc cgaggaaagc cgcggcgccg agcacgcgcg gccgtggatc gagcaggcca
     1801 agtcgagcta ctggcaactg atcgatacag agcaccggct gagcgatctc tacaacctcg
     1861 tgaacgtgcc gcaggcggtg tggatcgacg aacagggccg gatcgcgcgg ccgcccgaga
     1921 cggcgggctc gaccgatcat ttccgccgca tggacctcaa gacccgcacc atgtcgccgg
     1981 aggatcaggc cgaacgcctg gccgcccgcc aggcctatct cgatgctgtg cgcgcctggg
     2041 tcaacaccgg caagcacgcg ctgccggccg accaggcgcg cgccggcctg cccaaggtga
     2101 cgcaagcgat cgccgaggcg cgcgcgcgtt ttcgtctcgg cgtctggctg cgcgacaacg
     2161 gccgcaccac cgagggcgat cgccagatga atgccgcgag cggcctgcat cccgaatcgt
     2221 ggagcatgtg gcgccaggcc gccgacctcg acgaagtcgg caaggcatcc gggccggact
     2281 tctggaagcg cgtgcaggcg ctgggcgatc ggccgtatta tccgccgccc aagctttagg
     2341 attcgatgcg cctgtcctgg cacgatctcg gaacgccacg ggccgacaag gcgagcggaa
     2401 agccggtcga gctctcgggc tttccactga cggcgctgcc gacccgcagc gcttgcagtc
     2461 gccctgcgcg ggaaatttac agcggaggaa acggcaaagc tgcttggcgg caactatcgg
     2521 cgcgttttcg aagcctgcct gggctgagca tcacacctcc gtgaagccgg tccggtcact
     2581 ggttcgctgc ggcgcgctcg gctaggctcc cgcgtacttt ccaaacgacg ggagactggg
     2641 atggctgtcc tcaacgtcaa cggcaagtcc gtgaacacca cggctgatcc gcgcacgccg
     2701 cttttgtggg tcctgcgcga gcagctcggc ctcaccggca ccaagtacgg ctgtggcatc
     2761 gcccagtgcg gcgcctgcac cgtgcatatc gacggcgtgg cgacgcgctc ctgccaggtg
     2821 ccgctgaact cggtcggcgc caagaaggtc gtcaccatcg agggcctcgc cgccaacggc
     2881 acgctgaaca agatccaggc ggcctgggtg tcgctggacg tgccccaatg cggctactgc
     2941 cagagcggca tggtcatggc ggccaccgcc ctgcttgccg ccaagcccaa gccgaccgat
     3001 gccgacatcg atgcggccat gaccaacatc tgtcgctgcg gcacctacca gcaagtgcgc
     3061 gaagcgatcc acgccgcggc caaggcctga taggggagga cgactcatga cgatccagac
     3121 ctcgctcggc cgcaagcccc tccgtcgccg cggcttcctt gtcagcggcg cggccgtcgc
     3181 cggcggtttc tcgctcggct tccgcattcc catcggcgac ggcgccgcgc atgccgccga
     3241 agtcaaggag atcaatgcct gggtggtgat ccatccggac gacaaggtgg tgatccgcat
     3301 cgcccgctcg gagatggggc agggcacgct caccggtctc gcccagctcg tcgccgagga
     3361 gctcgagtgc gactggaaca aagtgacgac ggaatatccg acgcccggcg agaacctgaa
     3421 gcgcagccgg gtctggaaga actactcgac cggcggcagc cgcggcatcc gcgagagcaa
     3481 ccagtatgtc cgcgaaggcg gcgccgtggc acgccagatg ctgatcgcgg cggcggcggc
     3541 cgaatggaaa gtgccggcca acgaatgcac cgcggccaac agcatcgtca tgcacaagtc
     3601 gggcaagaag ctcggctacg gccatctcgc ggccgccgcg gccaagctcg agccgcccaa
     3661 ggaggtcaag ctcaaggacc cgaaggactg gaagatcgct ggcaagcccc tcaagcggct
     3721 cgacaccctg cccaagctca ccggccagat gatctacggc atcgacgtgc gcctgcccaa
     3781 catgctgacg gccacggtca aggcctgtcc ggtgatcggc ggcaagctca agagcttcga
     3841 ggccgcgaga gtcgagaaga tgcccggcgt gaa
//
LOCUS       DASWGA010000876         1745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1497591, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000876 DASWGA010000000
VERSION     DASWGA010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1497591"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1348)
                     /locus_tag="VF991_20270"
     CDS             complement(149..1348)
                     /locus_tag="VF991_20270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008192857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEX9558842.1"
                     /translation="MARGIKDKVAILGMGCSKFGERWDAGAEELMLESYKECLADAGI
                     DAKQLNAAWFSTAIDEVHVGKSGIPLSTTLRLPNIPVTHVENMCASGTEAFRGACYAV
                     ASGAADFALALGVEKLKDTGYGGLPGGRGGPLQALWNANGTAPGNFAQLATAYMAAHN
                     VSGEDLKKAIGHVSWKSHQNGAKNPKAHLQKAVEMDTILNAPMIASPLGLFDCCGVSD
                     GAAAAIVTTPEIAKAMGKQNLVSVKALQLSVSNGSESGHNSWDGSYFHTTRIASKKAY
                     EEAGIKNPRDEISMFEVHDCFSVTELVTMEDLHISETGKGWKDVLDGFYDADGKIPCQ
                     IDGGLKCFGHPIGASGLRMLYEMYLQFQGRAGARQLKDPRIGMTHNLGGAPRENVSSV
                     AIVGRYE"
     gene            complement(1476..>1745)
                     /locus_tag="VF991_20275"
     CDS             complement(1476..>1745)
                     /locus_tag="VF991_20275"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX9558843.1"
                     /translation="IDSQEPYAMAGLEANVMSFTADSLVYSPDPPGYYGMITFPEGGR
                     FMADFTDSDKDQVKVGAKMRMTFRIRDNDTMRGGFKRYFWKAAPV"
BASE COUNT          274 a          531 c          604 g          336 t
ORIGIN      
        1 cttgggggag aggttgggtg agggggttga agcgaaggct gtgtggcacc ccctcaccta
       61 gcctctcccc caagtcgcgc ctgtgaaggc gctgagggag agaaacatga agggatgagt
      121 gaagagataa gctaacgaga agtgcgcgtt actcgtagcg gccgacgatg gccacgctgg
      181 acacgttctc gcgcggcgcg ccgccgaggt tgtgggtcat gccgatgcgc gggtctttca
      241 gctggcgggc gccggcgcgg ccctggaact gcaggtacat ctcgtagagc atgcgcaggc
      301 ccgaggcgcc gatcggatgg ccgaagcatt tcaggccgcc gtcgatctgg caggggatct
      361 tgccgtcggc gtcgtagaag ccgtctaaaa cgtccttcca gcccttgccg gtctcggaga
      421 tgtgcaggtc ttccatggtc accagctcgg tgaccgagaa gcagtcgtgc acctcgaaca
      481 tcgagatctc gtcgcgcggg ttcttgatgc cggcctcttc ataggccttc ttcgaggcga
      541 tgcgcgtggt gtggaagtag ctgccgtccc acgagttgtg acccgactcc gagccgttcg
      601 agaccgagag ctgcagcgcc ttgacgctca ccaggttctg cttgcccatc gccttggcga
      661 tctcgggcgt ggtgacgatg gccgcggccg cgccgtccga gacgccgcag cagtcgaaca
      721 ggccgagcgg cgaggcgatc atcggcgcgt tcaggatggt gtccatctcg accgccttct
      781 gcagatgcgc cttgggattc ttggcgccgt tctgatggct cttccacgag acgtggccga
      841 tcgccttctt gaggtcctcg ccgctgacgt tgtgggcggc catgtaggcg gtggcgagct
      901 gggcgaagtt gcccggtgcc gtgccgttgg cgttccacag cgcctgcaag gggccgccgc
      961 ggccgcccgg caggccgccg tagccggtgt ccttcagctt ctcgacgccg agggcgagcg
     1021 cgaagtcggc cgcaccggag gcgacggcgt agcaggcgcc gcggaaggcc tcggtgcccg
     1081 aagcgcacat gttctcgacg tgcgtcaccg ggatgttggg caggcgcagc gtcgtcgaca
     1141 gcggaatgcc cgacttgccg acatggacct cgtcgatggc ggtcgagaac caggcggcgt
     1201 tgagctgctt ggcgtcgatg ccggcgtcgg ccaggcattc cttgtaggac tcgagcatca
     1261 gctcttcggc gccggcgtcc cagcgttcgc cgaacttgga gcagcccatg ccgagaatcg
     1321 cgaccttgtc cttgatacca cgagccattg ctggtctcct tggtggttgg gggttcagac
     1381 tacacgtaaa ctctttttgc tgggagcgcg ccactccgtg gcgctcttct cttcaatcat
     1441 gatgcgccac ggagtggcgc gctcccagca atgaatcaaa cgggtgccgc tttccagaag
     1501 tagcgcttga agccgccgcg catggtgtcg ttgtcgcgga tgcggaaggt catgcgcatc
     1561 ttggcgccga ccttgacctg gtccttgtcg ctgtcggtga agtcggccat gaagcggccg
     1621 ccctcgggga aggtgatcat gccgtaatag cccggcgggt ccggcgagta gaccagcgag
     1681 tcggcggtga acgacatcac gttcgcctcc agcccggcca tggcgtaggg ctcctggctg
     1741 tcgat
//
LOCUS       DASWGA010000877         3090 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2240909, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000877 DASWGA010000000
VERSION     DASWGA010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3090
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2240909"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="VF991_20280"
     CDS             <1..332
                     /locus_tag="VF991_20280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ornithine--acyl-ACP N-acyltransferase OlsB"
                     /protein_id="HEX9558844.1"
                     /translation="PGTDPSQHAQALSYLYHHHLAPPQIRVRALASRYVKMDVLAPDS
                     YDTRKAMARVPPLIKGYLRLGGFVGEGAVIDPEFNTTDVFITVKTEIITEKYIRHYER
                     GMRDQDV"
     gene            349..1167
                     /locus_tag="VF991_20285"
     CDS             349..1167
                     /locus_tag="VF991_20285"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX9558845.1"
                     /translation="MWIGSPLRGAFRLLSYLALTLVLVPIYLLAMALRINPIVRWMPV
                     AYHRIVCIVLGIRVRVHGQRSTVTPTLYVCNHVSYLDIEVLGGLIPGSFVAKAEVATW
                     PFFSTLAKAQRTIFIERRTGKTSTSRDQMMNRLNTGDNLMLFPEGTSSDGTRVLPFRS
                     ALFGVAQLRRDDKPITVQSVAIAYTRLDGIPLGRYWRPLFAWFGDLDLVPHLWQMVCL
                     GETEAVVTFFPPVDIDRLGDRKKLADYCFRQVSTGVQLANSGRLEQLPPPKKAA"
     gene            1367..2779
                     /gene="miaB"
                     /locus_tag="VF991_20290"
     CDS             1367..2779
                     /gene="miaB"
                     /locus_tag="VF991_20290"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006935416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEX9558846.1"
                     /translation="MTNVRTDGQRKRVFIRTYGCQMNVYDSNRMADVLRPLGYALADG
                     PEQADLVVLNTCHIREHASEKVYSELGRLRDAKYQRRAEGRDLTIAVAGCVAQAEGEE
                     IVRRQPAVDIVVGPQAYHRLPELLAEAERKASIRRAGKRLPGAGVLDTDFPTESKFDH
                     LPAPQGVRAGSAFLSIQEGCDKFCTFCVVPYTRGAEYSRPASAVLAEARQLLAAGAIE
                     ITLLGQNVNAYHGEAADGSTWSLARLIRALSEIDGVARIRYTTSHPRDMDDDLIAAHS
                     DVPQLMPYLHLPVQSGSDRILEAMNRRHGRDLFLRLVDRLRHAQSDLALSSDFIVGFP
                     GESDADFDETMRLIDEVGFASAFSFKYSRRPGTPGSAMPDQVPETVKAARLAALQALL
                     ARQARAFNASKVGATVPVLFAETGRKPGQIVGKTPWLQSVYADGDPRLIGRIVDVRLT
                     EGHANSLAGEIAVPSCEAAA"
     gene            2776..>3090
                     /locus_tag="VF991_20295"
     CDS             2776..>3090
                     /locus_tag="VF991_20295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558847.1"
                     /translation="MSDPTAVGGRSADVRRMTFDDNALLAVLYGNHDRHLVRIEQLAN
                     VQLSARGNQLAIAGAPDDAAVAHKALAGLYERLKRGLSIEMADIDAAVRFARSGADGG
                     DDG"
BASE COUNT          498 a         1072 c          986 g          534 t
ORIGIN      
        1 tgccgggcac cgatccctcg cagcacgccc aggcgctgtc atatctttat catcatcacc
       61 tcgcgccgcc gcagatccgg gtgcgcgcgc tggccagccg atacgtgaag atggacgtgc
      121 tggcgcccga cagctacgac acgcgcaagg cgatggcgcg cgtgccaccg ctgatcaagg
      181 gctacctgcg gctgggcggg ttcgtcggcg agggcgcggt gatcgatccg gaattcaaca
      241 ccaccgacgt cttcatcacc gtcaagacgg aaatcatcac agagaagtac atccgccact
      301 acgaacgcgg gatgcgcgat caggacgttt gacgcctgca ttgcagcgat gtggatcggt
      361 tctcccctgc gtggcgcgtt tcggctgctg agttaccttg cgctcacgct ggtgctggta
      421 ccgatctacc tgctggcgat ggcgctgcgc atcaatccga tcgtgcgctg gatgccggtc
      481 gcctatcacc gcatcgtctg catcgtcctg ggcatccgcg tgcgtgtcca cggccagcgc
      541 tcgaccgtca cgcccaccct ctatgtctgc aaccacgtct cctacctcga catcgaggtg
      601 ctgggcgggc tgatcccggg cagcttcgtc gccaaggccg aggtcgcgac ctggccgttc
      661 ttcagcacgc tggccaaggc gcagcgcacc atcttcatcg agcggcgcac cggcaagacc
      721 agcaccagcc gcgaccagat gatgaaccgg ctcaacaccg gcgacaatct catgctgttc
      781 cccgaaggca ccagcagcga cggcacgcgc gtgctgccct tccgcagcgc cttgttcggc
      841 gtcgcccagc ttcgccgcga cgacaagccg atcaccgtgc agtcggtggc gatcgcctac
      901 acccggctcg acggcattcc gctcggccgc tactggcgcc cgctgttcgc gtggttcggc
      961 gatctcgatc tggttcccca tctttggcag atggtctgcc tcggcgagac cgaggcggtt
     1021 gtcaccttct ttccaccagt cgacatcgac cgcctgggcg atcgcaagaa gctcgccgat
     1081 tattgcttcc gccaggtgtc caccggcgtg cagctcgcga attccggccg actggagcaa
     1141 ttgccgccgc ccaagaaggc ggcgtagcag gcatgactct ctagaatcgg attcctctcc
     1201 cccgcttggg ggagaggcta ggtgaggggg caacaacgtg cctatccccc tcacccaacc
     1261 tctcccccaa gcgggggaga ggagcccgat tcgttgggag gaaagcgcgg ctctcgaccg
     1321 tggtcgctcc gggtgttaga aaccgccgtt ccagcaacgg agacagatga cgaacgtccg
     1381 cactgacggg cagcgcaagc gcgtgttcat ccgcacctac gggtgccaga tgaacgtcta
     1441 tgattcgaac cgcatggccg atgtcctgcg gccgctcggc tatgccctgg ccgatgggcc
     1501 cgagcaggcc gatctggtcg tgctgaacac ctgccacatc cgcgagcacg cctcggaaaa
     1561 agtctattcc gagctcggcc gcctgcgcga cgccaagtac cagcgccggg ccgaaggccg
     1621 cgatctcacc atcgccgtcg ccggctgcgt cgcccaggcc gagggcgagg agatcgtgcg
     1681 ccgccagccg gccgtcgaca tcgtcgtcgg cccccaggcc tatcaccgtt tgcccgagct
     1741 gctggccgag gccgagcgca aggcatcgat ccggcgtgcc ggcaagcgcc tgccgggtgc
     1801 cggtgtgctc gacaccgatt tcccaaccga gagcaagttc gatcacttgc cggcgccgca
     1861 gggcgtgcgc gccggctcgg cgttcctgtc gatccaggaa ggctgcgaca agttctgcac
     1921 cttctgcgtc gtgccctata cacgcggcgc cgaatattcg cggccggcgt cggcggtcct
     1981 cgccgaggcg cgccagctgc tcgccgccgg cgcgatcgag atcacgctcc tcggccagaa
     2041 cgtcaacgcc tatcacggcg aggcggcgga tggctcgact tggtcgctgg cacgattgat
     2101 tcgcgccttg tcggagatcg atggcgtggc gcgaattcgc tacacgacct cccatccgcg
     2161 cgacatggac gacgatctga tcgccgctca tagcgacgtg ccgcagctca tgccgtatct
     2221 gcacctgcct gtgcagtcgg gctccgatcg catcctcgag gcgatgaacc gccgtcacgg
     2281 acgcgatctc ttcctgcgcc tggtcgatcg cctgcgccat gcacagtccg accttgcgct
     2341 gtcgtccgac ttcattgtcg gcttccccgg cgagagcgac gccgatttcg acgaaacgat
     2401 gcgtctgatc gacgaggtgg gatttgcctc ggccttctcg ttcaagtaca gccgccggcc
     2461 gggcacgccc gggtcggcga tgcccgatca ggtgccggag acggtgaagg cggcgcggct
     2521 cgccgcgctg caggctctgc tggctaggca ggcgcgcgct ttcaacgcct cgaaggtcgg
     2581 cgccaccgtg ccggtgctgt tcgccgagac cggccgcaaa cccggccaga tcgtcggcaa
     2641 gacgccctgg ctgcagtcgg tctatgccga cggcgatccg cgcctgatcg gccgtatcgt
     2701 cgacgtgcgt ctgaccgagg gccatgccaa cagcctggcg ggcgagatcg ccgtgccatc
     2761 gtgcgaggcc gccgcgtgag cgatccgaca gccgttggcg gccgctcggc cgacgtgcgc
     2821 cgcatgacct tcgacgacaa tgccttgctg gcggtgctct atggcaatca cgaccgtcat
     2881 ctcgtgcgca tagaacagct cgccaatgtg cagttgagcg cgcgcggcaa ccagcttgcc
     2941 attgccgggg cgccggacga tgccgcggtg gcgcacaagg cgctggccgg gctttacgag
     3001 cggctgaagc gcgggctgtc catcgagatg gccgatatcg atgccgccgt gcgctttgcc
     3061 cgcagcggcg ccgatggtgg cgacgacggc
//
LOCUS       DASWGA010000878         2063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1240619, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000878 DASWGA010000000
VERSION     DASWGA010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1240619"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..1204
                     /locus_tag="VF991_20300"
     CDS             59..1204
                     /locus_tag="VF991_20300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX9558848.1"
                     /translation="MGDRRIGVIINGATGRMGTTQHMAHLLAIAAEGGLKLENGDRLI
                     PELLLVGRDAGRLAKLAAAHGKQRWTTKLAEALAGPEQIFMDCAATGDRPARVRQAIE
                     AGKHIHIEKPTAPTVDEAMDLARLAERAGLKHGVIQDKLFLPGFAKLLSVSKSGFFGR
                     FLSVRIDAGSWIFDGTEQECQRPSWNYRKSEGGGLALDMMAHWRYMIDRLVAPITDVC
                     ALMTTAIPARVDEGGRKYAVDAEDTNYALLKMQGGAVGMITNSWATRPRRDDTMVVQI
                     DGTEGSAVAGRFRCFTQSAAETPEAFTAAARPGGVDLMADWREVPDIEASKNPFRQCW
                     ETFLRHVGEDAPYLPTLVVGAKAVQLADLAYRSMAEQRWMAVPDLKL"
     gene            complement(1209..1559)
                     /locus_tag="VF991_20305"
     CDS             complement(1209..1559)
                     /locus_tag="VF991_20305"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX9558849.1"
                     /translation="MVTLLATLVLLMNASRADAHVPPLREDPALQARAQARAEMLCAN
                     RQFSHDGYEVAYRGLNYRAMGENLAMGQRDARSVHAQLMASPGHRANILSREFGAVGV
                     GRACNITVELFGGR"
     gene            complement(1684..>2063)
                     /locus_tag="VF991_20310"
     CDS             complement(1684..>2063)
                     /locus_tag="VF991_20310"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9558850.1"
                     /translation="TKAVGPVMKRQGSGRIVNISSVAGLGPTGSSIAYAVSKAGLIHL
                     TKCMAVALAPEVLVNCVAPGLLEGTRATANLRPEQVATGRKASLLGKAADKDDVADQV
                     VTMCRTNTMTGQTLVIDSGRTFH"
BASE COUNT          346 a          666 c          728 g          323 t
ORIGIN      
        1 tgcaggtttt gccggggtga taactgcggg gacgcaacac cgcttggagc aggcagacat
       61 gggcgatcgt cgaatcggcg tcatcatcaa cggcgccacg ggccgcatgg ggacgaccca
      121 gcacatggcc catctcttgg ccattgccgc agagggcgga ctgaaactcg agaacggcga
      181 ccggctgatc ccggagctgc tgctggtcgg ccgcgacgcc ggccgcctcg ccaagctcgc
      241 ggccgcgcac ggcaagcagc gctggacgac gaagctggca gaggcactgg ccggtccgga
      301 gcagatcttc atggattgcg ccgccaccgg cgatcggcct gcgcgcgtcc ggcaggccat
      361 cgaagcgggc aagcacatcc acattgagaa gcccacggcg ccgacggtcg acgaggcgat
      421 ggatctggcg agattggccg agcgcgccgg cctcaagcat ggcgtcatcc aggacaagct
      481 gttcctgccc ggcttcgcca agcttttgtc tgtcagcaag tcgggattct tcggccgctt
      541 cctgtcggtc aggatcgatg ccggctcgtg gatcttcgac ggcaccgagc aggaatgcca
      601 gcgtccgagc tggaactacc gcaagagcga gggcggcggg ctggcgctcg atatgatggc
      661 gcattggcgg tacatgatcg accgcctggt ggcgccgatc accgatgtct gcgcgctgat
      721 gaccacggcc atcccggcgc gggtcgacga aggcgggcgc aaatatgccg tcgatgccga
      781 agacaccaac tacgccctgt tgaagatgca aggcggtgcg gtcggcatga tcaccaacag
      841 ttgggcgaca cggccgcgtc gcgacgacac catggtggtg cagatcgacg gcacggaggg
      901 ctcggcggtg gccgggcgtt ttcgctgctt cacgcagtcg gcggccgaga cgccggaagc
      961 cttcacggcg gccgcccggc cgggcggcgt cgacttgatg gcggactggc gggaagtgcc
     1021 ggatatcgaa gccagcaaga atcccttccg ccagtgctgg gagacgttcc tgcggcacgt
     1081 cggcgaagac gcgccctatc tgccgacgct ggtcgtgggc gccaaggcgg tgcagcttgc
     1141 cgatctggcg tatcgcagca tggccgagca acgctggatg gccgtgccgg acttgaagct
     1201 gtaaccggct acctgccgcc gaacaactcg accgtgatgt tgcaggcgcg gccgaccccg
     1261 accgcgccga attcccggct caggatattg gcgcggtggc ccggcgaggc catgagctgg
     1321 gcatggaccg accgcgcgtc gcgctggccc atcgccaggt tctcgcccat tgccctgtag
     1381 ttcagccccc ggtaggccac ctcgtagccg tcatgggaga actggcggtt ggcgcacagc
     1441 atttccgcgc gcgcctgggc acgggcctgc aaagcggggt cctcccgcag cggtgggacg
     1501 tgcgcgtcgg cccgcgacgc gttcatgagc aggaccagcg ttgccagcag cgtaaccata
     1561 gcggcttata cgagagccga catggcgcga tcgggacggc aagatgtcga tcgtgcggcg
     1621 acgttggtgc ggcccgccgt caacaggatg ccgccggcgg agcactgatt ggatcatcgg
     1681 tgctcaatgg aaggtgcggc ccgaatcgat caccagggtc tggccggtca tggtgttggt
     1741 gcggcacatc gtgacgacct ggtcggcgac gtcgtccttg tcggcggcct tgccgagcag
     1801 cgacgccttg cggccggtcg cgacctgctc gggccgcaga ttggcggtcg cgcgcgtgcc
     1861 ctcgagcagg ccgggcgcca cgcaattcac cagcacctcg ggcgccagcg ccacggccat
     1921 gcacttggtg agatggatca ggcctgcctt ggagacggca taggcgatcg aggatcccgt
     1981 cggcccgagc cccgcgaccg aggagatgtt gacgatccgc ccgctgccct ggcgcttcat
     2041 gaccggtccc acggccttgg tca
//
LOCUS       DASWGA010000879         3039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_628310, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000879 DASWGA010000000
VERSION     DASWGA010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628310"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VF991_20315"
     CDS             complement(<1..480)
                     /locus_tag="VF991_20315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9558851.1"
                     /translation="MNDLNGMPGPTSRHFFSQRLRLHYVDWGNPEAPPLLLVHGGRDH
                     CRNWDWVAQALRKDWHIICPDLRGHGDSQWSPDGNYAMSSYIYDLDQLIHQQGLAPVT
                     IIAHSLGGNICLRYAGIYPAKVRKLVAIEGLGPSPKVIATRGSKSMGERMREWVDEQR
                     "
     gene            709..2040
                     /locus_tag="VF991_20320"
     CDS             709..2040
                     /locus_tag="VF991_20320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX9558852.1"
                     /translation="MMSPEQNELITRTGPGTKCGGLMRHYWHPVALADELPAERPAKA
                     VRVLGQDFVLFRDERGRHGLLDRDCPHRGADLAYGRLEDGGLRCLFHGWLFDVDGRCL
                     ETPAEPEGSVLCQRVRQRSYPVMVKNGIIFAYLGEGEAPAFPDFDCFLAPGTHAFAFK
                     GLIDCNWLQALEVGIDPAHASYLHRFYEDEDTGAAYGKQFRSASSDSDIPMTRLLREH
                     TRPKLDVEATDYGLRLFALRRLDDRHTHVRVTNLVFPHAFVIPMSAEMTITQWHVPID
                     DVSCYWYAIFTSFGAPVDHAAMREQRLKLYELPDYRPRLGRHNSWGYNVGEQASQTFT
                     GMGFDINVHDQWAIESQGRIADRTREHLGTTDKAIVAYRRMLLSAIGQVANGEKPPMW
                     LDRVRAARIRGPIAIDGMGPTEGWQSYWKDVDARRRIGSSWAAKTIPPLVA"
     gene            2047..>3039
                     /locus_tag="VF991_20325"
     CDS             2047..>3039
                     /locus_tag="VF991_20325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HEX9558853.1"
                     /translation="MTLVERAGLWTEDRKAATREAERRIRAGEMSVVRLAFADQHGVL
                     RGKTLVAGEVDAALKNGVGFTTTMLLKDTAHRTVFPVWQPGGGFGMKELEGAADAVML
                     PDPTTFRALPWAPHSGWMLCDIHFADGRPMPLCTRHIYRSALKTLADRGYDFIAGLEV
                     EFHLFKLEKARLGVADAGQPGEPPDVSLLNQGYQYLTEQRYDEMDPILEILRTNIVDL
                     GLPLRTIEVEFGPSQVEFTFRAGTGMEPADAMVLFRSATKQVAQRHGFHATFMCRPKL
                     ANVMSSGWHLHQSLKDRKTGANAFMDGREPLSALGTHFMAGLLDHARAAAAFSTP"
BASE COUNT          506 a         1046 c          993 g          494 t
ORIGIN      
        1 gcgctgctcg tcgacccatt cgcgcatccg ctcgcccatc gacttggagc cgcgtgtggc
       61 gatcaccttc ggcgacgggc ccagcccttc gatagcgacc agcttgcgta ccttggcagg
      121 gtagatgccg gcataacgca ggcagatgtt gccgcccagc gagtgggcaa tgatggtcac
      181 gggcgccagc ccctgctgat ggatgagctg gtcgaggtcg tagatgtagg acgacatcgc
      241 atagttgccg tcgggcgacc attggctgtc gccatggccg cgcaggtcgg gacagatgat
      301 gtgccagtcc ttgcgcagcg cctgggcgac ccagtcccag ttgcggcaat ggtcgcgccc
      361 gccatgcacc agcagcagcg gaggcgcttc gggattgccc cagtcgacgt agtgaagacg
      421 cagacgctga gagaagaagt ggcgggaggt cggtcccggc atgccgttca gatcattcat
      481 gcctagctgt atagccggcc gaccggccgc ttgcctcccc gtcatgagct acggggtgga
      541 cacaactcaa attcctctcc cccgctaggg ggagaggcta ggtgaggggg taaagacgtg
      601 cgtatccccc tcacccgccc tctcccccta gcgggggaga ggagcctgat tcgacgatga
      661 tttcggcgct cggatgacag gaatgttcat ttgcgcaaca cttgcgccat gatgagtccc
      721 gagcagaacg agctgatcac ccgcaccggg ccgggcacca aatgcggcgg gctgatgcgg
      781 cattactggc atccggtggc gctcgccgac gaactgccgg ccgagcgtcc ggccaaggcg
      841 gtgcgcgtgc tcggccagga cttcgtgctg ttccgcgacg agcgcggtcg ccacggcctg
      901 ctcgaccgcg actgccccca tcgcggcgcc gatctcgcct acggccggct cgaggacggc
      961 ggcctgcgtt gcctgttcca tggctggctg ttcgacgtcg acggccggtg cctggaaact
     1021 cccgccgaac ccgaaggcag cgtgctctgc cagcgggtgc gccagcgctc ctatcctgtg
     1081 atggtgaaga acggcatcat cttcgcctat ctcggcgaag gcgaagcgcc cgccttcccc
     1141 gacttcgact gctttctcgc gcccggcacg catgccttcg ccttcaaggg cctgatcgac
     1201 tgcaactggc tgcaggcgct ggaggtcggc atcgatcccg cgcatgcctc ctatctgcac
     1261 cgcttctacg aggatgagga tacgggcgca gcttacggca agcagttccg ctccgcttca
     1321 tcggactccg acatcccgat gacgcgcctg ctgcgcgagc acacgcggcc caagctcgac
     1381 gtcgaggcga cggactacgg cctgcgcctg ttcgccttgc gccggctcga cgaccggcac
     1441 acccatgtgc gggtgaccaa cctcgtcttt ccccacgcct tcgtgatccc gatgagcgcg
     1501 gagatgacca tcacccagtg gcacgtgccg atcgacgacg tgtcctgcta ctggtacgca
     1561 atcttcacca gcttcggcgc gccggtcgat cacgccgcga tgcgcgaaca gcggctaaaa
     1621 ctttacgagc tgcccgacta ccgtccgcgc ctcggccggc acaattcgtg gggctacaat
     1681 gtcggcgagc aggccagcca gaccttcacc ggcatgggct tcgacatcaa cgtccacgac
     1741 cagtgggcga tcgaaagtca gggccgcatc gccgaccgca cgcgcgagca tctcggcacc
     1801 accgacaagg cgatcgtggc ctaccggcgc atgctgctgt cggccatcgg ccaggtggcg
     1861 aacggcgaga aaccgccgat gtggctcgat cgggtgcgcg ccgcccgcat ccgcggcccg
     1921 attgctatcg acggcatggg cccgaccgag ggctggcagt cctactggaa ggacgtcgat
     1981 gcacgccgcc gcatcggctc gagctgggcg gccaagacca tcccgcctct ggtcgcgtag
     2041 ggccgcatga ccctggtcga acgcgcgggc ctgtggacgg aggaccgcaa ggccgcgacg
     2101 cgcgaggcgg agcgccgcat ccgggccggc gagatgtcgg tcgtgcggct ggccttcgcc
     2161 gaccagcacg gcgtgctgcg cggcaagacc ctggtggcgg gtgaggtcga tgcggcgctg
     2221 aagaacggcg tcgggttcac cacgacgatg ctgttgaagg acaccgcgca ccgcacggtg
     2281 ttcccggtct ggcagccggg cggcggcttc ggcatgaagg agctggaggg cgcggctgac
     2341 gcggtcatgc tgcccgatcc cacaaccttc cgggcgctgc cgtgggcgcc gcattcgggc
     2401 tggatgctgt gcgacatcca ttttgccgac ggccgtccga tgccgctctg cacgcggcac
     2461 atctaccgga gcgcgctgaa gaccttggcc gaccgcggct acgatttcat cgccggcctc
     2521 gaagtcgaat tccatctctt caagctggag aaagcccggc tcggcgtcgc cgacgccggc
     2581 cagcccggcg agccgcccga cgtgtcgctg ctcaaccagg gctaccagta cctgaccgag
     2641 cagcgctacg acgagatgga cccgattctg gaaatcctgc gcaccaacat cgtcgatctc
     2701 ggcctgccgc tgcgcaccat cgaggtcgag ttcggcccca gccaggtcga gttcaccttc
     2761 cgcgccggga ccggcatgga gcccgccgac gccatggtgc tgttcagaag cgccaccaag
     2821 caggtggcgc agcgccacgg ctttcatgcc accttcatgt gccggcccaa gcttgccaac
     2881 gtcatgtcga gcggctggca cctgcaccag tcgctgaaag acaggaagac cggggccaac
     2941 gccttcatgg acggacgcga gccgttgtcg gcgctgggca cgcacttcat ggccggcctg
     3001 ctggaccacg cgcgcgccgc cgccgccttc agcacgccg
//
LOCUS       DASWGA010000880         5625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2002331, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000880 DASWGA010000000
VERSION     DASWGA010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5625
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2002331"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..918)
                     /locus_tag="VF991_20330"
     CDS             complement(<1..918)
                     /locus_tag="VF991_20330"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9558854.1"
                     /translation="MRMLGLLAGMAVALAMPAAAQDYPTKPIRIVVPFGPGTATDIVA
                     RTVGAEIASRTGQAVVIDNKPGAEGQIGAQAAATSAPDGYTLFITTQTTQAINIHVYK
                     SLPYDPVKSFAPVSGLSLGAQVVMVKNELSAKTIGELIALARKQPGKLSFGSGNGSSR
                     GGAELFRIMAKVDLLGVPYKTQPQAVSDLLGGRIDVIFCDFTTGLPPVLDGRARGLAV
                     TSKKRIAGLDQFPTVDETVPGFEMWAWTAAYLPAGTPQPIVDKLNALVREAVASEAYR
                     TLTRTTYGVPFAGSPDELAAFQASETKKWG"
     gene            1154..1828
                     /locus_tag="VF991_20335"
     CDS             1154..1828
                     /locus_tag="VF991_20335"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX9558855.1"
                     /translation="MKLYTHPVSTTSRPVMQFIADNNIAVDMQVVDILKGEHHQPAYS
                     DINPNRLIPMLEDGDFRLTESAAILRYLAEKTGSPAYPKDLKQRARVNEVMDWFNSNF
                     YRDWGYGLIYPQLFPHLKREDAKVQEGVIAWGKEKSKEWLKVLNDHFIGPKNQYLCGN
                     EITIADYFGAALVTAGELVHCNLSAYPNVERWLANVKKRPSYAKVYETFNGFCASTKG
                     QPWQAI"
     gene            1842..2345
                     /locus_tag="VF991_20340"
     CDS             1842..2345
                     /locus_tag="VF991_20340"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9558856.1"
                     /translation="MIKGLHHNAYRCRDSEETRRFYEDFLGLPLVHTLKIEETMTGRK
                     TGAGVLHTFFQLDDGSCLAFFEAPDMPFEFKDQHDFDLHIALEVEPEALDTMFAKGKA
                     EGREVRGVSDHKFIRSIYFRDPNGYVIELTAKVPGKESAMDPGKNHARDMLKAWQAAK
                     RQPATVA"
     gene            2371..3474
                     /locus_tag="VF991_20345"
     CDS             2371..3474
                     /locus_tag="VF991_20345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558857.1"
                     /translation="MKRGPWAALAALLGVVAFSSSSVAADPPQFQVDPFWPKPLPNNW
                     ILGQAASVATDSNDHVWVLQRPRSLTEDEKGATLNPPRNKCCAPAPSVMEFDADGNFI
                     QGWGSPDTKPWVTNEHGIHVDRKGFVWIAGNAETDSAIFKYTKDGKLVLTIGKLGPTG
                     GSNDKTLFGRPADIQVDEGTNEVYVADGYGNRRVIVVDSETGAYKRHWGAYGKTPSDD
                     KTPKYDPAAPVSQQFANPVHCAKVSRDGLVYVCDRTNNRIQVFKKDGSFVTEWFYEKS
                     TLGAGAVWDLNFWPDANQTWLFNIDGENNLLRILRRSDGAVVGGFGRSGRNAGQFHWV
                     HSIAVDSKGNIYTGEVDTGKRVQKFKPTSGPPR"
     gene            complement(3505..3975)
                     /locus_tag="VF991_20350"
     CDS             complement(3505..3975)
                     /locus_tag="VF991_20350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558858.1"
                     /translation="MRSIAVYALVAALAACANSDPGWSSLDAERDACAARAMASPESQ
                     ALQHRLQGGATADKATPTEATQMTTFHHDYLRPCQEIELEIAGRTHPSLPALYNEAAA
                     KADDNIAKLVSYQISWAEYARNGIAIRLELNARLEAARIALRLPSLNQLNQPRP"
     gene            complement(4053..4790)
                     /locus_tag="VF991_20355"
     CDS             complement(4053..4790)
                     /locus_tag="VF991_20355"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9558859.1"
                     /translation="MIEKTLDIPTKDGAVETFVCHPERGSYPPVLFLMDAPGIREELL
                     DMARRLATVGYYVLLPNLYYRAGKDTKYGPDVLTHGSEEHGRMRAVRTKMTIPPVMED
                     VAALIAFADSQKESKKGPVGAHGYCMSGPYALAAAARFPDRIAAAASFYGTWLVSDAV
                     ESPHLTLGKAKGELYISCAEHDDLAPPDMVKKLKALFDKSGNPGELEIQAGVHHGFAF
                     PQRWCYDKPAAERHWERLIALYRRRLG"
     gene            4870..>5625
                     /locus_tag="VF991_20360"
     CDS             4870..>5625
                     /locus_tag="VF991_20360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558860.1"
                     /translation="MRRLVFCGAALALAAWAAPAPAQQLTDGVVKLGVLTDMSSLYSD
                     INGIGAVVAVQMAIDEFGGSIGGKKIEIVQADVQNKADVAATVAGRWFDTEQVDVILG
                     TGASSASIATSRVANDKKKIYLATDPASSDLTGKLCNAYTVHWTYDTFALANGTGSAV
                     VKAGGKSWFFLTADYAFGYALERDVTAVVNKAGGTVLGGVKHPINSSDFSSYLLQAQA
                     SKAQVIGLANAGGDTVNAIKQASEFGIVKGGQKL"
BASE COUNT         1037 a         1874 c         1763 g          951 t
ORIGIN      
        1 gccccacttc ttcgtctcgc tggcttggaa cgctgcgagc tcgtcgggcg agccagcgaa
       61 cggcacgccg taggtcgtgc gcgtgagcgt gcggtaggcc tccgatgcca ccgcctcgcg
      121 caccagcgcg ttcagcttgt cgacgatcgg ctgcggcgtg cccgccggca ggtaggccgc
      181 agtccacgcc cacatctcga agcccggcac ggtttcgtcg accgtcggga actggtcgag
      241 cccggcgatg cgcttcttgc tggtcaccgc cagcccgcgc gcccgaccgt cgagcaccgg
      301 cggcaggccg gtggtgaagt cgcagaagat cacatcgatc cggccgccta aaaggtcgct
      361 gacggcctgc ggctgggtct tgtagggcac gcccaaaagg tcgaccttgg ccatgatgcg
      421 aaacagctcg gcgccaccgc ggctcgaacc gttgccgctg ccgaagctga gcttgcccgg
      481 ctgtttgcgc gcgagcgcga tcagctcgcc gatggtcttc gctgacaatt cattcttcac
      541 catcaccacc tgggcgccga gcgacaggcc ggagactggc gcaaagctct tcaccggatc
      601 gtagggcagc gacttgtaga catggatgtt gatcgcctgc gtggtctgcg tcgtgatgaa
      661 cagcgtgtag ccgtcgggcg ccgatgtcgc cgcggcctgc gcgccgatct ggccctcggc
      721 gccgggcttg ttgtcgatca ccaccgcctg gccggtgcgg ctggcgatct ccgcgcccac
      781 cgtgcgcgcc acgatgtcgg tcgccgttcc cggcccgaac ggcaccacga tgcggatcgg
      841 cttcgtagga taatcctgtg ccgcggccgg catcgccagc gccacggcca ttcccgccag
      901 caaaccgagc attcgcatgc gcctagccta cgccacgcgg ccgtgaggtg atagcgcgga
      961 ggtcagaggg ccgcggttcg aggacgtctg gctcgaccgc tgatctgccc ggcatcgcac
     1021 aaccgtgatg aagaagaggt tgtcatcgcg agcgaagcga gggacctttc cgttcgccgt
     1081 agaagatccc gcgcttcgct cgagatgaca gcgggcggga ccggacggca acacaccatc
     1141 gagggaggaa acgatgaagc tctacacgca tccggtttcg acgacgtcgc gtccggtgat
     1201 gcagttcatc gccgacaaca acattgcggt cgacatgcag gtcgtcgaca tcctcaaggg
     1261 cgagcatcat cagcccgcct acagcgacat caatccaaac cgcctgatcc cgatgctgga
     1321 ggatggcgac ttccggctca ccgagagtgc cgcgatcctg cgctatctcg cggaaaagac
     1381 cggctcgccc gcctacccga aggacctcaa gcagcgcgcc agggtcaacg aggtgatgga
     1441 ctggttcaac tccaacttct accgcgactg gggctatggc ctgatctatc cgcagctctt
     1501 cccccatctc aagcgcgagg acgccaaggt gcaggaaggc gtgatcgcct ggggcaagga
     1561 aaagtccaag gaatggctaa aagtcctgaa cgaccacttc atcggcccca agaaccagta
     1621 tctctgcggt aacgagatca ccatcgcgga ttacttcggc gccgcgctcg tgacggcggg
     1681 cgagcttgtg cattgcaatc tctcggccta tcccaatgtc gagcgctggc tcgccaacgt
     1741 caaaaagcgg ccgagctacg ccaaagtcta cgaaaccttc aacggcttct gcgcctcgac
     1801 caagggccag ccctggcagg cgatctgagc aggagatccc gatgatcaag ggtctgcatc
     1861 acaacgccta tcggtgccgc gattccgagg agacgcggcg cttctacgag gacttcctcg
     1921 gcctgccgct ggtgcacacg ctcaagatcg aggagaccat gaccggccgc aagaccggcg
     1981 ccggcgtgct gcacaccttc ttccagctcg acgacggctc gtgcctcgcc tttttcgagg
     2041 cgcccgacat gccgttcgag ttcaaggacc agcacgactt cgacctgcac attgcgctcg
     2101 aggtcgagcc cgaggcgctc gacacgatgt tcgccaaggg caaggccgag ggccgcgagg
     2161 tgcgcggtgt gagcgaccat aagttcattc gctcgatcta tttccgcgac cccaacggct
     2221 atgtcatcga actgacggcc aaggtcccgg gcaaggaaag cgcgatggat cccgggaaga
     2281 accatgcccg tgacatgctg aaggcgtggc aggccgccaa gcgccaaccg gcgacggtgg
     2341 cgtaacgacc aagaaacgac ggaggagacg atgaagcgtg ggccatgggc ggcgttggcc
     2401 gcccttttgg gcgttgttgc gttttcgtcg tcctccgtcg cggccgaccc gccgcaattc
     2461 caggtcgatc cgttctggcc caagcccctg cccaacaact ggatcttggg tcaggcggcg
     2521 agcgtcgcca cggattcgaa tgaccacgtt tgggtcctgc agcgtccgcg ctctctcacc
     2581 gaggatgaga aaggcgccac gctcaatccg ccgcgcaaca agtgctgcgc gcctgcgccg
     2641 tcggtcatgg agttcgacgc cgacggcaat ttcatccagg gttggggcag tcccgacacc
     2701 aagccgtggg tcaccaacga gcacggcatc cacgtcgatc gcaagggctt cgtctggatc
     2761 gccggcaacg ccgagaccga cagcgccatc ttcaagtaca ccaaggacgg caagctggtc
     2821 ttgacgatcg gcaagctcgg cccgaccggc ggcagcaacg acaagaccct gttcggccgg
     2881 cccgccgata tccaggtcga cgagggcacg aacgaagtct acgtcgccga cggctacggc
     2941 aaccgccggg tcatcgtcgt cgattcggag accggcgcct acaagcgcca ctggggcgcc
     3001 tacggcaaga cgccgtcgga cgacaagacg cccaaatacg atccggccgc gccggtctcc
     3061 cagcagttcg ccaaccccgt gcattgcgcc aaggtctcgc gcgacggctt ggtctatgtc
     3121 tgcgaccgca ccaacaaccg catccaggtc ttcaagaagg acggcagctt cgtcaccgag
     3181 tggttttacg agaagtccac gctcggcgcc ggcgcggtgt gggacctcaa cttctggccc
     3241 gacgccaacc agacctggct gttcaacatc gacggcgaga acaacctttt gcgcatcctg
     3301 cgccgcagcg acggcgccgt ggtcggcggc ttcggccgct ccggccgcaa cgccggccaa
     3361 ttccactggg tccacagcat cgccgtcgat tccaagggca acatctacac gggcgaagtc
     3421 gacaccggca aacgcgtgca gaagttcaag ccgaccagcg gcccgccgcg gtgattgctg
     3481 cgcgaaggac aagctcctcc aattttatgg tcgcggctgg ttcagctggt tgagcgacgg
     3541 cagccgcagg gcgatccgcg cggcttccaa tcgggcgttt aattcgagcc tgatggcgat
     3601 gccgttgcgg gcatattccg cccacgagat ctggtagctc acgagctttg cgatattgtc
     3661 atccgccttt gccgccgcct cgttgtagag cgccggcaac gaaggatgcg tcctgcccgc
     3721 gatctcgagc tcgatctcct ggcacgggcg gagatagtcg tggtgaaacg ttgtcatctg
     3781 ggtagcttcg gttggcgtcg ccttgtcggc cgtcgcgccg ccttgaagcc tgtgctgcag
     3841 cgcctgagat tcggggctgg ccattgcccg ggccgcgcag gcgtcgcgtt cggcatccag
     3901 agacgaccag cccgggtcgc tgttggcaca ggccgccaag gccgccacga gagcataaac
     3961 agcaatggat cgcatgaaac agcctcctgt caggaaggag acgactgttc cccgactttc
     4021 gttacaaagg gctgctgagg gccgaagggc ggctatccca accgccgccg ataaagcgcg
     4081 atcaggcgtt cccagtgccg ctcggcggcc ggcttgtcat agcaccagcg ctgtgggaag
     4141 gcgaagccat gatggacgcc ggcctgaatc tcgagctcgc ccggattgcc cgacttgtcg
     4201 aacagcgcct tcagcttctt caccatgtcg ggcggcgcca gatcgtcgtg ctcggcgcac
     4261 gagatgtaga gctctccctt ggccttgccc aaggtgagat gcgggctctc gaccgcgtcg
     4321 ctcaccagcc aggtgccgta gaacgacgcg gcggcggcga tgcggtcggg aaagcgcgcg
     4381 gcggcggcca gcgcataggg tccgctcatg caatagccgt gcgcgccgac cggtcccttc
     4441 ttcgactcct tctggctgtc ggcgaaggcg atcagcgccg cgacatcctc catcaccggc
     4501 ggaatggtca tcttggtgcg caccgcgcgc atacggccgt gctcctcgct gccgtgcgtc
     4561 agcacatcag gcccgtactt ggtgtccttg ccggcgcggt aatagaggtt gggcagcagc
     4621 acgtagtaac ccaccgtcgc cagccggcgc gccatgtcca aaagctcctc gcgaatgccg
     4681 ggcgcgtcca tcaggaacag caccggcgga taggaaccgc gttccggatg gcagacgaag
     4741 gtttcgacag cgccatcctt ggtcgggatg tccagagtct tctcgatcat gcccctgctc
     4801 ctcgtgcttt gcggccatgc cagcaccttg ctaggctcgg ctcaatagca aaacctaggg
     4861 agtgaaacga tgaggcgtct tgtgttctgc ggcgcggctt tggcccttgc ggcgtgggcc
     4921 gcgcccgcgc cggcccagca attgaccgac ggcgtggtga agctgggcgt gctcaccgac
     4981 atgtcgagcc tctactccga catcaacggc atcggcgccg tcgttgccgt gcagatggcg
     5041 atcgacgaat tcggcggcag catcggcggc aagaagatcg agatcgtgca ggccgacgtg
     5101 cagaacaagg ccgacgtggc cgcgaccgtc gctggacgct ggttcgacac cgagcaggtc
     5161 gacgtcatcc tgggcaccgg cgcgtcgtcc gcgtcgatcg ccacctcgcg cgtcgccaac
     5221 gacaagaaga agatctatct cgcgaccgat cccgcctcgt cggaccttac cggcaagctg
     5281 tgcaacgcct acaccgtgca ctggacctac gataccttcg cgctcgccaa cggcaccggt
     5341 tcggccgtcg tcaaagccgg cggcaagagc tggttcttcc tcaccgccga ctacgccttc
     5401 ggctatgcgc tggagcgcga cgtcaccgcc gtcgtgaaca aggccggcgg caccgtctta
     5461 ggcggcgtca agcacccgat caacagcagc gatttctcgt cgtaccttct gcaggcgcaa
     5521 gcctccaagg cgcaagtcat cggcctcgcc aacgccggcg gcgacactgt taacgcgatc
     5581 aagcaggcgt ccgagttcgg catcgtcaag ggcggccaga agctc
//
LOCUS       DASWGA010000881         1576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1753997, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000881 DASWGA010000000
VERSION     DASWGA010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1753997"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1576
                     /locus_tag="VF991_20365"
     CDS             <1..>1576
                     /locus_tag="VF991_20365"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HEX9558861.1"
                     /translation="ENDRKKFEPPFITLTAPDTNEAGKSHLEWGGDQVKDTALPLRAQ
                     LQARVFEPGGGRATRADKTLPMRTRNVYLGIRPTFEGRYAREGAVTEFDIVAVDATGK
                     QLARPAVEYRIERIDYNYQWYQVDGKWRWQSTQSERLLTTDTLALKADQPTRLSRQLS
                     WGQYKLTIVDSEHKALSSLSFYVGWYGGGNETEETPDTLRVASDKQNYAPGESARLRI
                     EPPFAGEALIAIATDRIVATYPVQVPAGGTTFEIPIKSEWGAGAYALVTAWRPLSTPA
                     DRTPTRAIGAAWLGIDPALRTLGVQIGAPEKVTPRQRIEVPIKVANLQNEEAFVTLAA
                     VDEGILQLTRFRLPNPADYYFGKRKLGIAMRDDYGRLLEANVDDLGRIRTGGDSGDIG
                     GLDVVPTRTVALFSGPVKLDDKGEAKIAFDIPDFVGQLRLMAVAYAKTRVGSTEQRLF
                     VRDAVTAEVVLPRFLAPNDRGRVALSLHNVDGQAGDYRVILEATGAVALERAVSETRK
                     LAANQRELLTWDLKAG"
BASE COUNT          280 a          576 c          509 g          211 t
ORIGIN      
        1 cggagaacga ccgcaagaag ttcgaaccgc ccttcatcac gctcaccgcg cccgacacca
       61 acgaggccgg caagtcgcac ctcgaatggg gcggcgatca ggtcaaggac acggcgctgc
      121 cgctgcgcgc tcagctccag gcccgcgtct tcgagcccgg cggcggccgc gccacgcgcg
      181 ccgacaagac gctgccgatg cgcacccgca acgtctatct cggcattcgt ccgaccttcg
      241 agggccgcta cgcccgcgag ggcgctgtga ccgagttcga catcgtggcg gtcgacgcca
      301 cgggcaagca gctcgcccgg ccggcggtcg agtaccgcat cgagcgcatc gactataact
      361 accagtggta ccaggtcgac gggaaatggc gctggcagtc gactcaaagc gaacggctgc
      421 tcaccaccga cacactcgcg ctcaaggccg accagccgac gcgcctgtcg cgacagctga
      481 gctggggcca gtacaagctg acgatcgtcg acagcgagca caaggccttg agcagcctgt
      541 cgttctacgt cggctggtac ggcggcggca acgagaccga agagacgccc gacacgctgc
      601 gcgtggcgag cgacaagcag aactacgcac cgggcgagag cgcgcgactg cgcatcgagc
      661 cgcccttcgc cggcgaggcg ctgatcgcca ttgccaccga ccgcatcgtc gccacctacc
      721 ccgtgcaggt tcccgccggc ggcacgacct tcgagatccc gatcaaatca gagtggggcg
      781 ccggcgccta tgcgctggtc accgcctggc gacctctgtc gacgcccgcc gaccgcacgc
      841 cgacccgcgc catcggcgcg gcgtggctcg gcatcgaccc cgccctgcgc acgctcggcg
      901 tgcagatcgg cgcgcccgag aaggtgacgc cgcgccagcg catcgaagtg cccatcaagg
      961 ttgccaacct gcagaacgag gaggcgttcg tcaccctcgc cgcggtcgac gaaggcatcc
     1021 tgcagctcac gcgtttccgc ctgcccaacc cggccgatta ttacttcggc aaacgcaagc
     1081 tgggcatcgc catgcgcgac gattatggcc gcctgctcga agccaacgtc gacgatctcg
     1141 gccgcatccg caccggcggc gattccggcg acatcggcgg cctcgacgtg gtgccgaccc
     1201 gcacggtcgc cttgttcagc ggaccggtaa aactcgacga caagggcgag gccaagatcg
     1261 cgttcgacat ccccgacttc gtcggccagc tcaggctgat ggcggtggcc tacgccaaga
     1321 cccgcgtcgg ctcgaccgag cagcgcctgt tcgtgcgcga cgcggtgacc gccgaggtgg
     1381 tcttgccgcg cttcctcgcg cccaacgacc gcggccgcgt ggccctgtcg ctgcacaatg
     1441 tcgacggcca agccggcgac tatcgcgtga tcctggaggc gaccggcgca gtcgcgctcg
     1501 aacgggcggt ctccgagact cgaaagctgg cggcgaacca gcgcgagctg ctgacctggg
     1561 atctcaaggc gggcga
//
LOCUS       DASWGA010000882         3137 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1498829, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000882 DASWGA010000000
VERSION     DASWGA010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3137
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1498829"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..362)
                     /locus_tag="VF991_20370"
     CDS             complement(<1..362)
                     /locus_tag="VF991_20370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX9558862.1"
                     /translation="MSSAETKMRDAICTLGAKLAARGLCPGTSGNISVKIADGWLMTP
                     TNSSLGELDPAQLSKLDSNGKHVGGDPPTKEALLHRSVYDVRPKDGAIVHLHCTHAVA
                     ISCLDPSCHHNEETTLPP"
     gene            complement(359..1615)
                     /gene="otnK"
                     /locus_tag="VF991_20375"
     CDS             complement(359..1615)
                     /gene="otnK"
                     /locus_tag="VF991_20375"
                     /EC_number="2.7.1.217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxo-tetronate kinase"
                     /protein_id="HEX9558863.1"
                     /translation="MTVLGVIADDFTGATDIAGMLVKGGMRTIQTIGVLDKTTIPGDV
                     DAIVVALKTRSIAAKDAVAQSLAALEVLRAGGCARFFFKYCSTFDSTDAGNIGPVGDA
                     LLDALKAKQAIYCPAFPENGRTIFFGHLFVGDVLLSDSHMRHHPLNPMTDASLVRVLA
                     RQTKHKVGLVALKQVQSGSATLRAALDKLASEGVRHVIVDAVADTDLGIIGEAVGDDL
                     LVTGGSGVALGLPAAYRRRGLLSHKANVDSLPKVAGAAAVLAGSCSAATLGQIAAFKG
                     PHLHLDTDAICRGEPVGEEALAWARDKLGNGPILLSASDKPDAVKALQSKYGVEKSSQ
                     AIEKTMAALAKGLVAAGVGRLVVAGGETSGAVVGALDVTALRIGPEIDPGVPWTASVG
                     AKPLLLALKSGNFGAPDFFTKAFQRL"
     gene            complement(1625..2044)
                     /locus_tag="VF991_20380"
     CDS             complement(1625..2044)
                     /locus_tag="VF991_20380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558864.1"
                     /translation="MTIYAGSCHCGAVKIQFTSDKTPEEMRIGRCDCGFCRRHGARTM
                     GDPAGSVEFRAAPSDLSRYRFALGITDYLLCAKCGTYVGAIMPDQGGTIGVVNVNSLD
                     IRDTFDPAPPLRHYEGEDEAARRARRRKFWMTARVIA"
     gene            complement(2041..>3137)
                     /locus_tag="VF991_20385"
     CDS             complement(2041..>3137)
                     /locus_tag="VF991_20385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003613257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEX9558865.1"
                     /translation="EGLVVTRYGYGEACKRIEIVEAAHPVPDDKGRAAAGRMLDKVKG
                     LRPDDLVLCLISGGASALLALPAPGLSLADKQEVNRALLKSGANIGEMNTVRKHLSAI
                     KGGRLAIAAQPARVLSWLISDVPNDDPGVIGSGPTVADRTTFADALAVLAKYRIDPPP
                     AVRAHLEKGAAGRIEETPKPGDPRLARVETIVVATPKRSLEAAAAVAKKRGLDVVLLG
                     DNLEGEARELGASHARQALDLARRAAKPPTKPIVILSGGETTVTMRGKGRGGRNVEYL
                     LAEAIAAGGAAGIWGLAADTDGVDGAEDIAGAVFAPDSLSRATALGRDPKAMLDDNDG
                     HSFFEMLGDSLVTGPTRTNVNDFRATLIAP"
BASE COUNT          476 a         1036 c         1111 g          514 t
ORIGIN      
        1 atcggcggca gcgtcgtctc ctcgttatgg tggcacgatg gatcgaggca ggagatcgcc
       61 acggcgtgcg tgcaatgaag gtgcacgatc gcgccgtcct tcggccgcac gtcgtagacc
      121 gagcggtgca gcagcgcctc cttggtggga ggatcgccgc cgacatgctt gccgttgctg
      181 tcgagcttgg agagttgcgc cggatcgagc tcgcccagcg aggagttggt cggcgtcatc
      241 agccagccgt cggcgatctt cacgctgata ttgcccgacg tgccggggca gaggccgcgc
      301 gcggcgagct tggcgcccag cgtgcagatc gcgtcgcgca tcttggtttc ggcgctgctc
      361 ataggcgctg gaaggctttg gtgaaaaagt ccggcgcgcc gaagttgccc gacttcagcg
      421 ccaacagaag gggcttggcg ccgaccgacg ccgtccatgg cacgccggga tcgatctccg
      481 gcccgatgcg gagcgcggtc acgtcgagcg cgccgactac ggcgcccgat gtctcgccgc
      541 cggccaccac cagccggccg actccggccg cgaccaggcc cttcgccagc gccgccatcg
      601 tcttttcgat cgcctggctc gatttctcga cgccgtactt ggattgcagc gccttcaccg
      661 cgtccggctt gtcgctcgcc gacagcagga tcggtccgtt gccgagcttg tccctggccc
      721 aggccagagc ctcctcgccg accggctcgc cgcggcagat ggcgtcggtg tcgagatgaa
      781 ggtgcgggcc cttgaaggcc gcgatctggc cgagggtcgc cgccgagcac gagccggcga
      841 gcacggcggc ggcgccggca accttcggca gcgagtcgac attggccttg tgggataaaa
      901 gtccgcggcg gcgataggcg gcaggcaagc cgagtgccac gcccgagccg ccggtgacca
      961 agaggtcgtc gccgactgcc tcgccgatga tgccgagatc ggtgtcggcc acggcgtcga
     1021 cgatgacatg gcgcacgcct tcagatgcga gcttgtcgag cgcggcgcgc aaggtcgccg
     1081 agcccgactg cacttgcttg agcgccacca gcccgacctt gtgtttggtc tggcgcgcca
     1141 gcacgcgcac caggctggcg tcggtcatgg ggttcagcgg atggtggcgc atgtgggagt
     1201 ccgacaacag cacgtcgccc acgaacagat ggccgaagaa gatggtgcgg ccgttctccg
     1261 gaaaggccgg acaatagatc gcctgcttgg cctttagcgc gtcgagcagc gcatcgccga
     1321 cgggaccgat gttgccggca tcggtcgaat cgaacgtcga acaatacttg aagaagaagc
     1381 gtgcgcagcc ccccgcccgc aggacctcga gcgcagcgag cgactgggcg accgcgtcct
     1441 ttgcggcaat cgagcgcgtc ttcagtgcca ccacgatggc gtcgacatcg ccggggatgg
     1501 tcgtcttgtc cagcacgccg atggtctgga tcgtgcgcat gccgcccttg accagcatgc
     1561 ccgcgatgtc ggtggcaccg gtgaagtcgt cagcgatcac tccgagaacg gtcatggcgc
     1621 gacgttaggc gatgacccgc gccgtcatcc agaactttcg gcggcgggcg cggcgggcgg
     1681 cctcgtcctc gccctcgtaa tggcgcagcg gcggggccgg atcgaacgta tcgcgaatat
     1741 cgagggaatt gacgttgacg acaccgatcg tcccgccttg gtccggcatg atggcgccaa
     1801 cataggtgcc gcacttggcg cagagcagat agtcggtaat gcctagcgcg aagcggtagc
     1861 gcgacaagtc gctcggcgcg gcgcggaact cgaccgatcc cgccggatcg cccatggtgc
     1921 gcgcgccgtg gcggcggcag aagccacagt cgcagcggcc gatccgcatc tcctccggcg
     1981 tcttgtccga ggtgaactgg atcttcacgg cgccgcaatg gcaggaaccg gcatagatgg
     2041 tcatggtgcg atcaaggttg ccctgaagtc attgacgttg gtgcgcgtcg gcccggtgac
     2101 aaggctgtca cccagcattt cgaagaagct gtgcccgtca ttgtcgtcga gcatcgcctt
     2161 ggggtcgcgg ccgagggcgg tggcgcggct gagcgaatcg ggtgcgaaga ccgcgccggc
     2221 gatgtcctcg gcgccgtcga cgccgtcggt gtcggccgcc aggccccaga tgccggccgc
     2281 gccgcccgcg gcgatcgcct cggccagcag gtattcgaca ttgcgtccgc cgcggccctt
     2341 gccgcgcatg gtgacggtgg tctcgccgcc cgacaggatc acaatgggct tggtgggcgg
     2401 cttggcggcg cgtcgggcga gatcgagcgc ctggcgtgcg tggctggcgc cgagctcgcg
     2461 cgcctcgccc tcgagattgt cgcccagcag cacgacgtcg agaccgcgtt tcttggcgac
     2521 agcagcggcg gcctcgagcg agcgcttggg cgtggcgacc acgatcgtct cgacgcgtgc
     2581 gaggcgagga tcgcctggct tgggcgtttc ctcgatccgg ccggccgcgc ctttctccag
     2641 atgggcccgc acggcgggcg gcggatcgat gcggtatttg gcgagcaccg ccagcgcgtc
     2701 ggcgaaggtc gtgcggtcgg ccacggtcgg ccccgagccg atcacgccgg gatcgtcgtt
     2761 gggcacgtcg gagatcagcc agctcaagac gcgcgcgggc tgggcggcga tggcgagacg
     2821 gccgcccttg atggcggaga ggtgctttcg caccgtgttc atctcgccga tgttggcgcc
     2881 cgacttcagg agcgcgcgat tgacctcttg cttgtcggcc aagctgagac cgggcgccgg
     2941 cagggcgagc agcgccgagg cgccgcccga gatcaggcag aggacgagat cgtccggcct
     3001 cagtcccttc actttgtcga gcatgcggcc agcggcggcg cggcctttgt cgtcgggtac
     3061 cgggtgcgcc gcctcgacga tctcgatcct cttgcacgcc tcgccatagc cgtagcgcgt
     3121 caccaccagg ccctcca
//
LOCUS       DASWGA010000883         3317 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2242447, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000883 DASWGA010000000
VERSION     DASWGA010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3317
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2242447"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1519
                     /gene="tssM"
                     /locus_tag="VF991_20390"
     CDS             <1..1519
                     /gene="tssM"
                     /locus_tag="VF991_20390"
                     /inference="COORDINATES: protein motif:HMM:TIGR03348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type VI secretion system membrane subunit TssM"
                     /protein_id="HEX9558866.1"
                     /translation="AGVRVFTRASGKKLSDGVPGFFTVDGFHKVLLPALPAATREVAS
                     ESWVMGQKVPVSLDNAQQAELANSVVKQYLDDYAKAWDGLIQDLEIVPLRSLPQAAQD
                     LYVLASPQSPLKDLLTAIARQVTLSEPPKPSTAVAAAEAAAKKAAAAAAPGATRGAAA
                     LSSILAGQPGAAPALPPGHEIDERYKQLRDLVAASGGAPIDQVLKLLNDLQQQLAKLN
                     AAGVGAPVAPIGNDPSLALRAESQRQPQPLGRWLAAMAESSTALRGGGARQQVIAAYN
                     GSGGPAALCPLAVNGRFPFVPGSSLETPLDDFAKLFAPGGLIDGFFNTQLRPYVDTTG
                     KVWKPQSVDGVAAPVSQADIAQFQRAAVIRDLFFAAGSTTIAVRFDIMPVQLDPGAAQ
                     VSLEFDGTSINYAHGPSRSTQITWPGPNHMQNVRLVFDPPPAGGTGVLSETGPWAMFR
                     LFSRGTLQQAGSPERYTLTFSLGERSATFELRAGSVMNPFAPGVLQDFRCPAVRG"
     gene            1527..2168
                     /gene="tagF"
                     /locus_tag="VF991_20395"
     CDS             1527..2168
                     /gene="tagF"
                     /locus_tag="VF991_20395"
                     /inference="COORDINATES: protein motif:HMM:TIGR03373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated protein
                     TagF"
                     /protein_id="HEX9558867.1"
                     /translation="MSALPHDARVGLFGKLPARGDFVRENLPRDFADAWDAWWQRGLA
                     ETQGRPHDEWLDAWLEAPVWRFVLPPGLCGANGVLGLWMPSVDKAGRYFPLTIAATAL
                     SDWLPCVGPMMRFLEGAEEAGRDALEQDLSPVALLERIQGIFIADDAPGSPPDFVAGQ
                     AAWWTEGGPRVAARMEAGAVLPEGSRFAALIDDGWGQAQPAEALATNGETEVS"
     gene            2168..3055
                     /locus_tag="VF991_20400"
     CDS             2168..3055
                     /locus_tag="VF991_20400"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEX9558868.1"
                     /translation="MSDTGIAQNIARFGSFRSRAASHAGTAGRHNEDAYLNRPDLGLW
                     AVADGAGGHQSGEVASAEVVDLLQGIEAGLSATDMLQEVRSRLETAHARLRAAALRRG
                     ADVIMATTAVVVLARDDYFACLWAGDSPAYLLRANTLTKITRDHSLVQDLVESGIISE
                     TEATNHPQANVITRAVGADADALNLDKRTGRLVLGDRLLLCSDGLSKTLSNERLAELL
                     SGGGDTSAERLVMAALDAQAIDNVTAVIIDFDADNGSTTLQASPSSVPASTAAEASAG
                     SSADEHRGVAHNDGPPVGA"
     gene            complement(2999..>3317)
                     /locus_tag="VF991_20405"
     CDS             complement(2999..>3317)
                     /locus_tag="VF991_20405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020096084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HEX9558869.1"
                     /translation="RPDRTGERLMGLPAARVGDMHVCPMVTVLVPHVGGPVLPPGAIT
                     TLIGGMPAARVGDMLVCVGPPDVIALGSFTTLIGGMPAAQLGSLCAHGGAIVMGYPTV
                     LIG"
BASE COUNT          536 a         1105 c         1136 g          540 t
ORIGIN      
        1 ggccggcgtg cgcgttttca caagggcgtc gggcaagaag ctgagcgacg gcgtcccggg
       61 cttctttacc gtcgatggat ttcacaaggt gctgctgccg gcattgccgg cagcgacgcg
      121 cgaggtcgcc tcggaaagct gggtgatggg gcaaaaagtg cccgtcagcc tcgacaacgc
      181 ccagcaggcc gaactcgcca acagcgtggt caagcagtac ctcgacgact acgccaaggc
      241 gtgggacggc ctgatacagg acctcgagat cgtgccgctg cgcagcctgc cgcaggcggc
      301 tcaggatctg tacgtcctgg cttcgccgca atcgccgctg aaggacctgc tgacggcgat
      361 cgctcgtcag gtcacgctgt cggagccgcc gaagccctcc accgcggtgg cggcggcgga
      421 agcggcggca aagaaggcgg ctgccgccgc cgcgccgggg gcgacaagag gcgccgccgc
      481 actttcatcg atactggcgg gccagccagg tgccgcaccc gcgctgccgc ctggccatga
      541 gatcgacgaa cgatacaagc aactgcgcga cctggtcgcc gccagcggcg gcgcaccgat
      601 cgaccaggtg ctgaaactgc tcaacgacct gcagcagcag ctggcgaagt tgaacgccgc
      661 cggcgttggt gcgcccgtcg caccgatcgg caacgatcct tcgctcgcgc tcagggcgga
      721 gtcccagcgg cagcctcaac cgcttggccg ctggctggcc gccatggccg aatcaagcac
      781 cgcgttgcgc ggcggtggtg cccgccagca ggtgattgcg gcctataacg gttccggcgg
      841 gccggcggcg ctttgtccgc tcgccgtgaa cggacgcttt ccgttcgtgc cgggcagttc
      901 gctcgaaacg cctctcgacg actttgccaa gctgtttgcg ccgggcggcc tgatcgacgg
      961 ctttttcaac acccaactgc ggccctatgt cgacacgacg gggaaggtct ggaaaccgca
     1021 gtccgtcgat ggcgtggcgg cgccggtctc gcaggcggac atcgcccagt tccagcgcgc
     1081 cgccgtcatt cgtgacctct tcttcgcggc tggttcgacg acgattgcgg ttcgcttcga
     1141 catcatgccc gtccagctcg atccgggcgc tgcccaggtc agcctggaat tcgacggcac
     1201 gtcgataaac tacgcgcatg ggccgtcgcg ctcgacccag atcacctggc cgggccccaa
     1261 ccatatgcag aatgtccggc tggtgttcga tccgccgccc gccggcggca cgggggtcct
     1321 gtcggagacc gggccgtggg cgatgttccg gctgttcagc cgcggaacgc tgcagcaagc
     1381 tggttcgccg gagcgctaca ccctgacctt ctcgctcggc gagcgtagcg cgaccttcga
     1441 acttcgcgcc ggctcggtca tgaatccttt cgccccggga gtcctgcagg acttccgctg
     1501 cccggcggtt cgaggctagc cgagcgatgt ccgcgctgcc gcacgatgca cgtgtcggcc
     1561 tgttcggcaa gctgccggcg cgcggcgact ttgtgcgtga gaatttgccg cgcgattttg
     1621 ccgacgcctg ggacgcctgg tggcagcgtg gcttggccga aacgcagggt cggccccacg
     1681 acgagtggct tgatgcatgg ctggaagcgc cggtctggcg cttcgtattg ccgcccgggc
     1741 tgtgcggcgc aaacggcgtg ctcggacttt ggatgcccag cgtcgacaag gcgggacgct
     1801 actttccgct gaccatcgcg gctacggcgc tgagcgattg gctgccctgt gtcgggccga
     1861 tgatgcgatt cctggagggc gcggaggaag ccgggcgcga tgccctcgag caggatctct
     1921 cgccggtcgc actgctggaa cgcattcagg gcatcttcat cgccgacgat gcaccagggt
     1981 cgccgcccga tttcgtggcc gggcaggcgg cttggtggac cgagggtggc ccgcgcgtcg
     2041 ctgcgcgcat ggaggcgggc gcagtgctgc ccgagggcag tcgctttgcc gcccttatcg
     2101 atgatggctg gggccaagcg cagccggcag aggcgctcgc gacgaacggc gaaacggagg
     2161 tctcgtgatg tccgacaccg gcatcgctca gaatatcgcc cggttcggca gcttccgctc
     2221 gcgagccgca agccatgccg ggacggccgg acggcacaac gaggacgcct atctcaaccg
     2281 acccgatctc ggcctgtggg ccgtcgccga cggcgcgggc ggccatcagt cgggcgaagt
     2341 cgcatcggcc gaagtggtcg atctgttgca aggtatcgag gctggcctgt ctgccaccga
     2401 catgctccag gaagtgcgat cacgcctcga gacggcgcat gcccgtctgc gcgctgcggc
     2461 gttgcgccgt ggggccgacg tgatcatggc gaccaccgcc gtggtggtcc tggcgcgaga
     2521 cgactatttt gcctgcctgt gggcgggaga ttctccagct tacctgctgc gcgccaatac
     2581 gttgaccaag atcacgcgcg accacagcct ggtgcaggac ctggtcgaga gcggcatcat
     2641 cagcgagacc gaagccacaa atcatccgca ggccaatgtc atcacgcgcg ctgtcggtgc
     2701 cgacgccgac gcgctcaatc tggacaagcg gacaggacgg ctcgtgctcg gagatcgcct
     2761 gttgctgtgc agtgatggcc tgtcgaaaac cctatccaac gaacggcttg ccgagcttct
     2821 ttctggcggc ggggacacca gcgccgagcg cctggtcatg gctgcgctgg acgcgcaagc
     2881 gatcgacaat gtcacggcgg ttatcatcga cttcgatgcc gacaacggct cgaccacctt
     2941 gcaagcgagc ccgagcagcg tacctgcctc cactgcggca gaggcgagcg cgggctcgtc
     3001 agccgatgag caccgtgggg tagcccataa cgatggcccc cccgtgggcg catagcgagc
     3061 ccagctgggc ggcgggcatg ccgccgatca gcgtggtgaa agatcccagt gcgatcacgt
     3121 cgggcggccc gacacagacc aacatgtcgc cgacgcgcgc tgccggcatg ccgccaatca
     3181 gcgtggttat ggcgccgggc ggcaggacgg ggccgccgac atgcggaacc aggacggtga
     3241 ccatcgggca gacatgcatg tcgcccacgc gtgcggcagg cagacccatc agtcgctctc
     3301 cggttcgatc cggccgg
//
LOCUS       DASWGA010000884         3136 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1754474, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000884 DASWGA010000000
VERSION     DASWGA010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3136
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1754474"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..286
                     /locus_tag="VF991_20410"
     tRNA            210..286
                     /locus_tag="VF991_20410"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:244..246,aa:Pro,seq:cgg)
     gene            complement(331..624)
                     /locus_tag="VF991_20415"
     CDS             complement(331..624)
                     /locus_tag="VF991_20415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558870.1"
                     /translation="MRTVSFSLVVCVLAASLSGAARADDEFMKECLVTATQKMCDCIS
                     AKMPADKRAAAIAGMRKSNAATQPGGNLLDPSTLSQEQMQGLDAVVIAQASCM"
     gene            complement(697..1665)
                     /locus_tag="VF991_20420"
     CDS             complement(697..1665)
                     /locus_tag="VF991_20420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019996147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9558871.1"
                     /translation="MRRIAALFFAALLALPAAAQEPYPSHAITLISPYPPGGATDFLA
                     RTLAEGLKNQLNQTVIVQNVGGAGGTVGALQAAKAKPDGYTLVLHHIGMSTIPVLYKK
                     LAFDPLAAFEFIGVFAEAPMMFLARRDFAPKDFAELVAYAKANREKATVASAGMGSVT
                     HLCAMLFQEALGVPLTIVQYKGGGPAMVDVRSGQVDFICDLPTTTSGAIRSGELKAYV
                     LTAPQRMATMPDVPTAAEVGMPSLAIGVWFGLYAPRGTPKSVVEALNKALREVMADKT
                     VAAQLEKIETVLLPLDEVTPEAHRRKLASQIELWRPIIEKAGIQAE"
     gene            1764..2612
                     /locus_tag="VF991_20425"
     CDS             1764..2612
                     /locus_tag="VF991_20425"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9558872.1"
                     /translation="MKLEKPDPRIGAIATGVDVRALSDADWKALYRAWLDGIVLVVRG
                     QTLSMEEFLAYSRRFGRLKPHRVKKTRHVQYPELTVMGLGTRKPDGQVDPAIYNRGGD
                     WHTDSPWDTEICKATQLYGIAIPSLGGDTLFANMYEAYETLPETLKKRIDGLKAEHAY
                     GGRKRKGHELLEPEDRLRPPAVHPVVRLHEETGRKSLYANPTHILRIQGLGDAESDAL
                     IKELTDHMVATPAQYRHKWAVGDIVIWDNRCALHSATGGYPIEEQRIHWRVTIMQDAA
                     EAQRAA"
     gene            complement(2777..>3136)
                     /locus_tag="VF991_20430"
     CDS             complement(2777..>3136)
                     /locus_tag="VF991_20430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558873.1"
                     /translation="GVAVGAVSGAMMATTSIGGPPVLLYLLSGNDPPQVNRANIVTYY
                     FLTQFLLIVIVLATGVAGLDALARAAVLFPVMVLGAWAGGRLFHGLASERLYRNVALV
                     ILFATGLFGLLRNWLFG"
BASE COUNT          568 a         1037 c         1041 g          490 t
ORIGIN      
        1 aaagacgtcg aacagcgtct ggctgatggc gccatagccg atcagcgcga ttttcagccg
       61 cttcttcctt gccatgcgtg ccccccgcct gcccttgaac ggcacgacta tagcgggcgg
      121 gtgccgctcc agcgaccata cttgcgacct tggggggtgg cggctataac ccgcctcgcc
      181 aaacggccgg gtgaactctg cttttctgac ggagtgtagc tcagcctggt agagcactag
      241 cttcgggagc taggggccgg aggttcgaat cctctcactc cgaccaattg gcaaagagac
      301 ggcgcgcagc gatgcgcgcc gttttgctgt ctacatgcat gacgcctggg cgatgaccac
      361 ggcatcgagg ccctgcatct gctcctgcga cagcgtcgag ggatcgagca ggttgccgcc
      421 cggctgggtc gcggcgttgg acttgcgcat gccggcgatg gcggcggcgc gtttgtcggc
      481 cggcatcttg gccgatatgc aatcgcacat tttctgcgtc gccgtaacca gacactcctt
      541 catgaactcg tcgtcggcac gcgcggctcc cgaaaggctg gcggccagga cgcaaacgac
      601 aagactgaag gaaaccgtac gcatcaggtc gctccccgaa gacgaccgcc cccgcggcgg
      661 cacgagcgag acaatatcgc ggcgccaggc tgttgcctat tccgcctgga tgccggcctt
      721 ctcgatgatc ggccgccaca gctcgatctg cgaggcgagc ttgcggcgat gggcctcggg
      781 cgtgacctcg tcgagcggca gcaggacggt ctcgatcttc tcgagctggg cggcgaccgt
      841 cttgtcggcc atgacctcgc gcagcgcctt gttcagcgcc tcgacgacgg acttcggcgt
      901 gccgcgcggc gcgtagagtc cgaaccagac accgatggcg aggctcggca tgccgacctc
      961 ggccgcggtc ggcacgtcgg gcatcgtcgc catccgctgc ggcgcggtca gcacataggc
     1021 cttgagctcg cccgagcgaa tggcgcccga ggtggtcgtc ggcaggtcgc aaatgaagtc
     1081 gacctggccc gaacgcacat cgaccatggc cggcccgccg cccttgtact gcacgatcgt
     1141 gagcggcacg ccgagcgcct cctggaacag catggcgcag aggtgcgtca cgctgcccat
     1201 gccggccgag gcaacggtgg ctttctcccg gttggctttg gcgtaggcga ccagctcggc
     1261 gaagtccttc ggcgcgaagt cgcggcgggc caggaacatc atcggcgcct cggcgaacac
     1321 gccgatgaac tcgaaggccg caagcggatc gaaggcgagc ttcttgtaga gcaccgggat
     1381 ggtcgacatg ccgatatgat gcagcaccag ggtgtagccg tcgggcttgg ccttggccgc
     1441 ctgcagcgcg cccaccgtgc cgccggcgcc gccgacattc tggacgatca cggtctgatt
     1501 cagctgattc ttcagcccct cggcgagcgt gcgcgccagg aagtcagtgg cgccacccgg
     1561 cgggtatggc gagatcagag tgatggcatg gctgggataa ggctcctgcg ccgccgcggg
     1621 cagggcgagc agagccgcga aaaacaaagc cgcgatgcgg cgcatctttt cctccccaat
     1681 cttctgctgg tctccttgtt ggcggcaatg ctgggccaag ccggcggcct ttaccagcgc
     1741 ggcgaagggc gtaagcttgc gcgatgaaac tcgaaaagcc ggatccccgc atcggcgcca
     1801 tcgccaccgg ggtcgatgtg cgtgccctgt cggatgccga ctggaaggcg ctctatcgcg
     1861 cctggctcga cggcattgtg ctggtggtgc gcggccagac gctgagcatg gaggagtttt
     1921 tagcctactc gcgccgcttc ggccggttga agccgcaccg cgtgaagaag acgcgtcatg
     1981 tccaatatcc cgagctcacg gtgatgggac tgggcacgcg caagcccgac ggccaggtcg
     2041 acccggcgat ctacaatcgc ggcggcgact ggcacaccga ttcgccatgg gacaccgaga
     2101 tctgcaaggc cacgcagctc tacggcatcg ccattccgtc gctgggcggc gacacgctgt
     2161 tcgccaacat gtacgaggcc tacgagacgc ttcccgagac gctcaagaag cgcatcgacg
     2221 ggctcaaggc cgagcacgcc tatggcgggc gcaagcgcaa gggccacgag ctgctggaac
     2281 ccgaggaccg gctgcggccg ccggcggtcc atcccgtcgt gcgcctccac gaagagaccg
     2341 gccgcaagtc gctctatgcc aaccccaccc acatcctgcg catccagggc ctgggcgatg
     2401 ccgaaagcga cgcgctgatc aaggagctca ccgatcacat ggtggcgacg ccggcgcagt
     2461 accgccacaa gtgggcggtg ggcgacatcg tgatctggga taaccggtgc gcgctgcact
     2521 cggcgaccgg cggctatccg atcgaggaac aacgcatcca ctggcgcgtc accatcatgc
     2581 aggacgcagc cgaagcccag cgcgcggctt aactaagctt cctccccagc gaagctgggg
     2641 aggtgtcgcc gtcacacggc ttgtaaccaa gccgctgagg cgacggaggg tcataaacgc
     2701 tacaagagaa gcgcatgacc cctccgtccg cttcgcggac acctcccctc gtatgaacga
     2761 ggggaggagt tgaggcttag ccgaacagcc agttcctcag caggccgaac aggccggtgg
     2821 cgaacaggat gacgagcgcc acgttgcgat agaggcgttc gctggccagg ccgtggaaca
     2881 gccgcccgcc cgcccacgcg cccagcacca tgacaggaaa cagcacggcg gcccgggcca
     2941 gcgcgtcgag gcccgcgacg ccggtcgcca gcacgatcac gatcagcagg aactgcgtca
     3001 ggaaatagta ggtgacgatg ttggcgcggt tgacctgtgg cggatcgttg cccgacagca
     3061 ggtagagcag caccggcggg ccgccgatgc tggtggtggc catcatcgcg cccgacaccg
     3121 cgccgaccgc gacgcc
//
LOCUS       DASWGA010000885         1605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2242934, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000885 DASWGA010000000
VERSION     DASWGA010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2242934"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..1111
                     /locus_tag="VF991_20435"
     CDS             113..1111
                     /locus_tag="VF991_20435"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9558874.1"
                     /translation="MPLTRVKTVTAEIVDFAPPVTLTGVVEARIRTDLSFRLSGKISE
                     RLVNVGEHVAKGQLLARLDPDEQQAELVSAEASVASAEAMVRQSAAAFERQKELLGRG
                     NTTRRDYDQADASLRSAHAQLDQARSDLKLAQDQLSYTELRADADGIITALKAEVGQV
                     VAQAQPIYTLARDGPRDALFNVHDWAMANLATDNGLAVSLVSDPAVKTLGDVREISPA
                     VNPSTETVTMKVGLRETPQAMVLGALVNGTGPMKQKRVVLVPWPSLFEVDGKPAVYVV
                     APGSNVVSLKPITIYRYTRDRIAVSSGLTSGDTVVSAGVQMLRPGQKVEIAAETRR"
     gene            1108..>1605
                     /locus_tag="VF991_20440"
     CDS             1108..>1605
                     /locus_tag="VF991_20440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter periplasmic adaptor subunit"
                     /protein_id="HEX9558875.1"
                     /translation="MRSAHSRLALLALLAALAACKEEQQTSIEPAVRPVLSVVAVVRT
                     TDTFGPFAGTIEPRYKTDLGFRIFGRMVARFVDVGSIVRKGQELAALDPAVQALGVRS
                     AEATLASAEAQYANAEAEETRQRDLVQRNFTPQAQFDLVQRNRETAAANLTRARASLR
                     KAKDLL"
BASE COUNT          253 a          565 c          545 g          242 t
ORIGIN      
        1 atgccgcacc tgatagcatc gggcaaaagg gggctttggg attcctcgtt caacgatctg
       61 gctggtctgc ttcggccttc tggcggggtg caaggacgac ggcggcgccc cagtgccgct
      121 gacccgggtc aagacggtga ccgcggagat cgtcgatttc gcgccgcccg tcacgctcac
      181 cggcgtggtg gaggcccgca ttcgcaccga cctctccttc cgcttgagcg gcaagatcag
      241 cgagcggctg gtcaatgtcg gcgagcacgt cgcgaagggc cagttgctgg cccgcctgga
      301 tcccgacgag cagcaggccg agcttgtttc ggccgaggcc agcgtggcgt cggccgaggc
      361 gatggtgcgc cagtcggcgg ccgccttcga gcgccagaag gagctgctcg gccgcggcaa
      421 caccacgcgc cgtgactacg accaggccga cgcctcgctg cgctcggccc atgcgcagct
      481 cgaccaggcc cgttccgacc tcaagctggc gcaggaccag ctctcctaca ccgagctgcg
      541 cgccgacgcc gacggcatca tcactgcgct caaggccgag gtcggccagg tggtggcgca
      601 ggctcagccg atctacaccc tggcgcgcga tggcccacgc gatgcgctgt tcaacgtcca
      661 tgactgggcg atggccaatc tcgccaccga caacggcctt gccgtatcgc tggtatccga
      721 cccggcggtg aagacgctgg gcgacgtgcg cgagatctcg ccggcggtca atcccagcac
      781 cgagaccgtg accatgaagg tggggctgcg cgagacgccg caggccatgg tcctcggggc
      841 gctggtcaac ggcaccggcc cgatgaagca gaaaagggtt gtcctggtac cgtggccttc
      901 gttgttcgag gtcgacggca agccggcggt ctacgtggtc gctcccggca gcaacgtcgt
      961 gtcgctgaag cccatcacca tctatcgcta caccagggac cgtatcgccg tgtcgagcgg
     1021 gctcacgtcg ggcgacactg tggtcagcgc cggcgtgcag atgctgcgcc cggggcagaa
     1081 ggtcgagatc gccgcggaga ccaggcgatg aggtcggccc attcccggct ggcgctgctg
     1141 gcgttgctcg ccgcactcgc ggcctgcaag gaagagcagc agacgtcgat cgagcccgcg
     1201 gtccgtccgg tgctctcggt cgtggccgtc gtgcgcacca ccgacacgtt cggtcccttc
     1261 gccggcacca tcgagccgcg ctacaagacc gatctcggct tccgcatctt cggccgcatg
     1321 gtggcgcgct tcgtcgatgt cgggtcgatc gtgcgcaagg gccaggagct ggccgcgctc
     1381 gatcccgccg tgcaggcgct gggcgtgcgc agcgccgaag ccacgctcgc cagcgccgag
     1441 gcgcagtacg ccaacgccga ggccgaggag acccgccagc gcgacctcgt gcagcgcaac
     1501 ttcacgccgc aggcccagtt cgacctggtc cagcgcaacc gcgagaccgc cgccgccaac
     1561 ctcacccggg cacgcgcctc cctgcgcaag gccaaggatt tgctt
//
LOCUS       DASWGA010000886         3691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1500206, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000886 DASWGA010000000
VERSION     DASWGA010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3691
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1500206"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..1544
                     /gene="ugpB"
                     /locus_tag="VF991_20445"
     CDS             228..1544
                     /gene="ugpB"
                     /locus_tag="VF991_20445"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     substrate-binding protein UgpB"
                     /protein_id="HEX9558876.1"
                     /translation="MTRILLSSVVTAAVLASASGASAQTEIQWWHAMGGNLGETVNEI
                     AAGFNKTQTEYKVVPVYKGSYTEALTAAIAAFRAKQAPHIVQVLEVGTANMMAAKGAI
                     YPIYQLMADAKEPFDPKVFIAPVYGYYSTTDGKLLSMPFNSSTPVLYWNKELLAKAGY
                     DPNKPPATWPELGEMAKKAVAAGAKCGFTPQWQTWTLIENYGAWHDLPYATKANGFGG
                     TDIELKFNDAPRVKLIQMLADWGKDKTFVYGGREGKSTALFTAGDCVFHIASSATASA
                     IDKALGTDKFGIAMMPYSPDVRPKPQNSIIGGATLWVLQGRPKEEYKGVAKFLTYLSS
                     APVQAKWHQETGYVPVTLAAAKLTEESGFYKKFPGRDVAVEELTLNPPTENSKGLRIG
                     NFVQIRDVVDEELEAVWSGKKAAKAALDEAVKRGNELLRKFETANR"
     gene            1643..2524
                     /gene="ugpA"
                     /locus_tag="VF991_20450"
     CDS             1643..2524
                     /gene="ugpA"
                     /locus_tag="VF991_20450"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpA"
                     /protein_id="HEX9558877.1"
                     /translation="MEKRVTFNERWLPYLLVAPQIVITLVFFFWPSGQAIWQSVLVED
                     AFGGNSKFVWFDNFTQLFYDSNYYASARLTLVFSALVASIGLAVSLLLAVMADRVIRG
                     ASVYKTFLVWPYAVAPAVAGVLWGFLFNPSVGVVAWMLQSIGIEFNYVSNGNQALLLV
                     VIAAVWNQVSYNFLFFLAGLQSIPKSLIEAAAIDGAGPGRRFWDIMFPLLSPTGFFLL
                     VINILYAFFGTFGVVDALTKGGPGQATNILVYKVYNDGFRGQDLGGSSAQSVILMLVV
                     IVLTFVQFRFIERRVHY"
     gene            2524..3375
                     /gene="ugpE"
                     /locus_tag="VF991_20455"
     CDS             2524..3375
                     /gene="ugpE"
                     /locus_tag="VF991_20455"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018480638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015794 - glycerol-3-phosphate
                     transmembrane transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpE"
                     /protein_id="HEX9558878.1"
                     /translation="MVENRPFLTWLSHAILILGVIIIAFPVWMTFVASTHDQATMLRA
                     PVPMLPGPDLIDNYSKVLTAGFGRGFGETPIWLTLMNSLIMALGVALGKIAISIISAF
                     AIVYFRFPLRMIFFWAIFVTLMLPVEVRIVPTYGVVANLGMLDSYPGLIIPLIASATA
                     TFLFRQFFLSVPDELAEAARVDGASPMRFFWDILLPMSRTTIAALFVIQFIYGWNQYL
                     WPLLITTKESFYTVVMTVSRQANAVDATPSWNLLMAMAMLAMLPPVLVVVFMQRLFVR
                     GLVETEK"
     gene            3396..>3691
                     /locus_tag="VF991_20460"
     CDS             3396..>3691
                     /locus_tag="VF991_20460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010973682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9558879.1"
                     /translation="MAQVHLRGVKKSYDKLEVIHGIDMEIADGEFIVIVGPSGCGKST
                     LLRMVAGLERITGGQVAIGERVVNELEPKDRDIAMVFQNYALYPHMSVYDNMAYG"
BASE COUNT          638 a         1201 c         1154 g          698 t
ORIGIN      
        1 cgacgacggc gacgtggcca gggccctggt cggcatgggg gcggactgca tcatcaccga
       61 cgcgcccgac gtaatcctgg cggcgcttgg ctgacgtgag gccaaattga ggggttgcgt
      121 tctctacaca ggcttggtgg actgtcatca gaccgcaaca aaatagacac atcgcagtct
      181 tgcggcccgt cgatacatcg gcgggggttt cagggaggtt tttggcaatg acacggattc
      241 ttctatcgtc cgtcgtgacg gcggcggtgc tcgcgagtgc gtccggcgcc tcggcgcaga
      301 ccgaaatcca gtggtggcac gccatgggcg gcaatctggg cgaaacggtc aacgaaatcg
      361 ccgcgggctt caacaagacc cagaccgaat acaaggtcgt accggtctat aagggctcct
      421 acaccgaggc cctgaccgcc gcgatcgccg ccttccgcgc caagcaggcg ccgcacatcg
      481 tgcaggtctt ggaggtaggc accgccaaca tgatggccgc caagggcgcg atctatccga
      541 tctaccagct catggccgac gccaaggagc cgttcgatcc caaggtcttt atcgcacccg
      601 tctacggcta ctattcgacg accgacggca agctcttgtc catgccgttc aactcctcga
      661 ccccggtgct ctactggaac aaggagctgc tggccaaggc gggctacgat cccaacaagc
      721 cgccggcaac ctggccggag ctgggcgaga tggccaagaa ggcggtcgcc gccggcgcca
      781 agtgcgggtt cacgccgcaa tggcagacct ggacgctgat cgagaattac ggcgcctggc
      841 acgacctgcc gtacgccacc aaggccaacg gcttcggcgg caccgacatc gagctcaagt
      901 tcaacgacgc cccgcgggta aaactcatcc agatgctggc cgactggggc aaggacaaga
      961 cgttcgtcta tggcggccgc gagggcaagt cgacggcgct gttcaccgcc ggtgactgcg
     1021 tgttccatat cgcctcgtcg gccaccgcct cggcgatcga caaggcgctg ggcaccgaca
     1081 agttcggcat cgccatgatg ccttattcgc cggacgtgcg gcccaagccg cagaactcga
     1141 tcatcggcgg cgccaccctg tgggtgctgc agggccgccc gaaggaagag tacaagggcg
     1201 tcgccaaatt cctgacgtat ctgtcgagcg cgccggtgca agcgaagtgg caccaggaga
     1261 cgggctacgt gccggtcacg ttggccgccg ccaagctcac cgaggagtcg ggcttctaca
     1321 agaagttccc cggccgcgac gttgccgtcg aggagctcac cctcaacccg ccgaccgaaa
     1381 actccaaggg cctgcgcatc ggcaacttcg tgcagatccg cgacgtcgtc gacgaggagc
     1441 tcgaggcggt gtggtccggc aagaaggccg ccaaggccgc cctcgacgag gccgtgaagc
     1501 gcggcaatga actgctgcgc aagttcgaaa cggccaacag gtaggcttcc tcccggcctc
     1561 ccccgcttcg cgggggaggc ggcccccctt gtttgatgag gggcccggag ggcatggcgg
     1621 cgggggagag agatctaggg ggatggaaaa gcgtgtcacc ttcaacgagc ggtggttgcc
     1681 ctacctcctg gtggcgccgc agatcgtcat caccctggtc tttttcttct ggccctcggg
     1741 ccaggcgatc tggcagtcgg tgctggtcga ggacgcgttc ggcggcaatt ccaagttcgt
     1801 ctggttcgac aacttcaccc agctcttcta cgatagcaac tactacgcct cggcgcggct
     1861 caccctggtg ttcagcgccc tcgtcgcctc gatcgggctt gcggtttcgc tgctgctggc
     1921 ggtgatggcc gaccgcgtca tccgcggcgc cagcgtctac aagaccttcc tggtctggcc
     1981 ctatgcggtg gcgccggcgg tggccggcgt gttgtggggc ttcctgttca acccttcggt
     2041 cggcgtcgtc gcctggatgc tgcagagcat cggcatcgag ttcaactatg tgagcaacgg
     2101 caaccaggcg ctgctgctgg tggtgatcgc cgcggtgtgg aaccaggtga gctacaattt
     2161 cctgtttttc ctggccggcc tgcagtcgat cccgaaatcg ctgatcgaag cggccgccat
     2221 cgacggggcg gggccgggtc ggcgcttctg ggacatcatg ttcccgctgc tttcgcccac
     2281 cggcttcttc ctgctggtga tcaacatcct ctacgccttc ttcggcacct tcggcgtggt
     2341 cgatgcgctg accaagggcg ggccgggcca agccaccaac atcctggtct acaaggtcta
     2401 caacgacggc ttccgcggcc aggacctcgg cggctcatcg gcgcagtcgg tgatcctgat
     2461 gctcgtggtg atcgtgctca cctttgtgca gttccgtttc atcgagcgca gggtccacta
     2521 ctgatggtcg agaaccggcc gttcctcacc tggctgagcc acgccatcct catcctgggc
     2581 gtgatcatca tcgccttccc ggtgtggatg accttcgtcg cctcgaccca cgaccaggcg
     2641 accatgctgc gcgcgcccgt gcccatgctg cccggtccgg atctgatcga caactactcg
     2701 aaggtcttga ccgcgggctt cggccgcggc ttcggcgaaa cgccgatctg gctcacgctg
     2761 atgaacagcc tgatcatggc gctgggcgtc gccctgggaa agatcgcgat ctccatcatc
     2821 tccgccttcg ccatcgtcta tttccgcttc ccgctgcgca tgattttctt ctgggcgatc
     2881 ttcgtcaccc tgatgctgcc ggtggaagtg cgtatcgtgc cgacctacgg cgtggtcgcc
     2941 aatctcggca tgctcgattc ctatcccggc ctgatcatcc cgttgatcgc ctcggccacc
     3001 gcgaccttcc tgttccggca gttcttcctc agcgtgcccg acgaactcgc cgaggcggcg
     3061 cgcgtcgatg gtgcttcgcc catgcggttc ttctgggaca tcctgctgcc gatgagtcgc
     3121 accacgatcg cggccctgtt cgtgatccag ttcatctacg gctggaacca gtacctgtgg
     3181 cccttgctga tcaccaccaa ggaaagcttc tacaccgtgg tcatgacggt ctcgcgccag
     3241 gccaacgcgg tcgatgcgac gccgagctgg aacctgctga tggccatggc gatgctcgcc
     3301 atgctgccgc cggttctggt cgtggtcttc atgcagcgcc tgttcgtgcg cggcctggtt
     3361 gaaaccgaga agtaggcgag acggagaaat aggccatggc gcaagtccac ctgcgcggcg
     3421 tcaagaagag ctacgacaag ctcgaggtca ttcacggcat cgacatggag atcgccgacg
     3481 gcgagttcat cgtcatcgtg ggcccctcgg gctgcggcaa gtccacgctc ttgcgcatgg
     3541 tggcgggact ggagcgcatc accggcggcc aagtggcgat cggcgagcgc gtggtcaacg
     3601 agctcgaacc caaggaccgc gacatcgcca tggtgttcca gaactacgcg ctctatccgc
     3661 acatgagcgt ctacgacaac atggcgtacg g
//
LOCUS       DASWGA010000887         4586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_631026, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000887 DASWGA010000000
VERSION     DASWGA010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4586
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_631026"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1775)
                     /locus_tag="VF991_20465"
     CDS             complement(<1..1775)
                     /locus_tag="VF991_20465"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HEX9558880.1"
                     /translation="MNPLFASAFKKPPIGRCVGRRVGSSLAFAASLAFALQPSLSLAQ
                     VQMSDPDRVQTKPNPPAPAKKTVRKHDPTDNVSDDLNRREAERVEQAVRAMIAPPAAA
                     SPAVAPAAMTTAGSSADTKPVGTNAAGESLLPTVAAIPPRAPITRASLTPDVGLTPPA
                     PAMPQPPVASPPAVERTPPASPPPKFAQAPTPQPTPAPVPIQPPAAGTPAPVTGGAPG
                     RPFGQSQVVPTEQPTLSLEINKGTALKLPGPAATVFVAAPDIADVQVRSPTMVYVFAK
                     KPGDTVLYAVDAQDRVLLNTIVRVTSPLSRIKGALDAIHPGNGVIFDNQGETIVLTGS
                     VRSAVVAEDARRLALQQVNGNAAKVISNIQIDAPTQVQLRVKVAEVKRDALKRVGINW
                     QNINSIALFGTGAILGGFAVRTISATGGAASGALAFQTSDNGLNTLIDFLATQSQATV
                     LAEPNLIAMSGETASFLAGGEIPLIVPQGGTLVGTITVQYKQVGVSLAFTPTIIGERI
                     NLKVAPEVSQITTQGQVSVPITATATVIIPAVETRKASTTVELGSGQSFAIAGLLNHT
                     SQQDITKVPWLGDIPVLGTLFKSDA"
     gene            complement(1772..2767)
                     /gene="cpaB"
                     /locus_tag="VF991_20470"
     CDS             complement(1772..2767)
                     /gene="cpaB"
                     /locus_tag="VF991_20470"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX9558881.1"
                     /translation="MNSKRIVFLLLAVIVAGTTAFLARAWLQSERAAMAAQMGGQRQV
                     SAKSAVQVLVARNVLRTGQIIKPDDLRWQPWPAGALPPTYIVEGKRAIADVAGAVVRS
                     QFHVGAPIVETEIVMPGSRGFLAAVLKPGMRAVSMPVTATTAVSGFIYAGDRVDVLLT
                     HTLTSANGQHHATETILRNARVIAMDQKLDFAPGDKPDVAKTATLELTTKQAEIVTLA
                     VKMGELSLSLRSLQDPADEERDQTSGEEATAELGETYTHDSQVSRLIKDPPPPKTPDA
                     AKPAVFVLRGNARIKQELDGSVAADVGQPPSESEATKPNASRATPFTRTNPSVPQ"
     gene            complement(2789..3295)
                     /locus_tag="VF991_20475"
     CDS             complement(2789..3295)
                     /locus_tag="VF991_20475"
                     /EC_number="3.4.23.43"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEX9558882.1"
                     /translation="MSLFALLQIGCLVAFALLLLLAAWQDLRTMRIADSLSLAIVAVF
                     AVWALGGVALGTLSLSTIGLAVVCAVVLFGAGAAAFAVGAFGGGDVKLLAAASLFAGP
                     ALISDFLMVTALAGGALGVAILAGAPIGPDVPAADATVRARLRGGLPYGPAIAAGGLW
                     VAGLLVLR"
     gene            complement(3642..3788)
                     /locus_tag="VF991_20480"
     CDS             complement(3642..3788)
                     /locus_tag="VF991_20480"
                     /inference="COORDINATES: protein motif:HMM:NF016828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX9558883.1"
                     /translation="MLSLFRSLVKNQQGATVVEFTLIVSLIAVAAIASMRSVSSKVSN
                     VLTN"
     gene            complement(4004..>4586)
                     /locus_tag="VF991_20485"
     CDS             complement(4004..>4586)
                     /locus_tag="VF991_20485"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011974344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEX9558884.1"
                     /translation="WVDPPLDRAGAWLAERGASAHAMTIVGLAIGLLAVPLLAGAHYG
                     WALVVILLNRLIDGLDGAIARRGSPSPFGGYLDIVCDMAFYAAVPFGFALARPANALW
                     AALLLASFVCTAASFLGRAVMAAQRGETDDGAHGHKAFFYAAGIIEGSETILAFVLFC
                     LFPQAFPWLAGVLAVLCLWTAAARVIAAFQSSP"
BASE COUNT          795 a         1463 c         1607 g          721 t
ORIGIN      
        1 taggcgtcgg acttgaagag cgtgcccagc accgggatgt cgcccagcca cggcaccttg
       61 gtgatgtcct gctgcgacgt gtgattgagc aggccggcga tggcgaagct ctggccgctg
      121 ccgagctcga cggtggtcga cgctttgcgt gtttcgacgg cggggatgat caccgtcgcg
      181 gtggcggtga tcggcacgct cacctgcccc tgggtggtga tctggctcac ttccggcgca
      241 accttgagat tgatgcgctc gccgatgatg gtcggcgtga aggcgaggct gacgccgacc
      301 tgcttgtatt gcacggtgat ggtgccgacc agggtgccgc cctgcggcac gatcagcggg
      361 atctcgccac cggccaggaa gctcgccgtc tcgcccgaca tggcgatcag gttgggctcg
      421 gccagcacgg tggcctggct ctgggtggcg aggaagtcga tcagcgtgtt gaggccgttg
      481 tcggaggtct ggaaggcgag cgcgcccgag gcggcgccgc cggtcgccga gatggtgcgc
      541 acggcgaagc cgcccaggat ggcgccggtg ccgaacaggg cgatgctgtt gatgttctgc
      601 cagttgatgc cgacgcgctt cagggcatcg cgcttgacct cggcgacctt gacgcggagc
      661 tggacctggg tcggcgcatc gatctggatg ttgctgatca ccttggcggc gttgccgttg
      721 acctgctgca gggcgagccg ccgggcatcc tcggcgacca ccgccgagcg cacgctgccg
      781 gtcagcacga tagtctcgcc ctgattgtcg aagatgacgc cattgcccgg atgaatcgcg
      841 tcgagcgcgc ccttgatgcg gctgagcggc gaggtcacgc gcacgatggt gttgagcagc
      901 acgcggtcct gggcatcgac ggcatagagc acggtgtcgc ccggcttctt ggcgaagaca
      961 tagaccatgg tgggcgagcg cacctgcacg tcggcgatgt cgggcgcggc cacgaacacc
     1021 gtcgcggcgg ggcccggcag cttgagcgcc gtgcccttgt tgatctcgag cgagagcgtc
     1081 ggctgctccg tcggcacgac ctggctctgg ccgaacggac ggccgggcgc gccgcccgtg
     1141 accggcgcgg gcgtgccggc tgccggcggt tgaatcggca cgggtgcggg cgtgggctgc
     1201 ggcgtcggcg cctgggcgaa cttcggcggc ggcgaggccg gtggtgtgcg ctcgaccgcg
     1261 ggcgggctcg cgaccggcgg ctgcggcatg gccggtgccg gcggcgtcag gccgacatcg
     1321 ggagtgagcg aggcacgcgt gatgggcgcg cgtggcggga tggcggcgac cgtcggcagc
     1381 aacgactcgc cggcggcgtt tgtcccgacc ggcttggtgt cggcggaact gccggcggtg
     1441 gtcatggccg ccggcgcaac cgccggcgag gccgccgccg gcggggcaat catcgcccgc
     1501 acggcctgct cgacgcgctc agcttcgcgg cggttgagat cgtccgagac gttgtcggtg
     1561 ggatcgtgct tgcgcaccgt cttcttggcg ggtgccggcg ggttgggctt ggtctggacg
     1621 cggtcgggat cgctcatctg gacctgggcg agcgagagcg acggctgcaa cgcgaaggcg
     1681 agcgacgcgg cgaacgccag cgacgagccg acgcggcggc caacgcagcg gccaatcggc
     1741 ggcttcttga acgcagaggc gaacaggggg ttcattgcgg cacgctcggg ttggttcggg
     1801 taaagggggt cgcgcggctg gcgttcggct tggtggcttc ggattccgat ggcggctggc
     1861 caacgtcggc ggcgacgctg ccgtcgagtt cctgcttgat gcgggcgttg ccgcgcagca
     1921 cgaagaccgc cggcttggcg gcgtccggcg tcttgggcgg agggggatcc ttgatgaggc
     1981 ggctgacctg gctgtcgtgc gtataggtct cgccaagctc ggcggtggcc tcctcgccgc
     2041 tcgtctggtc gcgctcctcg tcggccgggt cctgaaggct gcgcagcgac agcgacagct
     2101 cgcccatctt gaccgccagc gtgacgatct cggcctgctt ggtggtgagc tccagcgtcg
     2161 cggtcttggc gacgtcgggc ttgtcgcccg gcgcgaagtc gagcttctgg tccatggcga
     2221 tcacgcgggc attgcgcagg atcgtctcgg tggcgtggtg ctggccgttg gcgctggtca
     2281 gcgtgtgggt gagcaggacg tcgacgcgat cgccggcata gatgaagccc gacaccgccg
     2341 tggtcgccgt gaccggcatg ctgacggcgc gcatccccgg cttcaggacg gccgcgagga
     2401 agccgcgcga acccggcatg acgatttcgg tctcgacgat cggcgcgccg acatggaact
     2461 ggctgcggac gaccgcgccc gccacgtcgg caatcgcccg cttgccttcg acgatgtagg
     2521 tcggcggcaa ggcgcccgcc ggccacggct gccagcgcag gtcgtcgggc ttgatgatct
     2581 ggccggtccg cagcacgttg cgcgcgacca gcacctgcac tgcggacttg gccgagacct
     2641 ggcgctgccc gcccatttgc gcggccatcg ccgcccgttc ggactgcagc caagcgcggg
     2701 ccaggaaagc cgtcgtgccg gcgacaatca cggcaagcag caggaaaacg atgcgtttgc
     2761 tattcatggc gcttccccaa cccctgcctc atcgcagcac cagcaagccg gcaacccaca
     2821 ggccgccggc ggcgatcgcc gggccatagg gcaggccgcc gcgcagccgc gcgcgcaccg
     2881 ttgcgtcggc ggccggcaca tccggaccga tcggcgcgcc agccaggatg gccacgccca
     2941 gcgcgccgcc ggccagtgcg gtgaccatca ggaaatccga gatcagggcg ggaccggcga
     3001 acaggctcgc ggcggccagc agcttgacgt cgccaccgcc gaatgcgccg accgcgaagg
     3061 cggcggcgcc ggcgccgaac agcaccacgg cacagacgac cgccagcccg atggtggaca
     3121 aagacaaggt gccgagagcg acgccgccca gcgcccacac ggcaaagacc gcgacaatcg
     3181 ccagcgacag actgtcggcg atgcgcatcg tgcgcagatc ctgccaggcc gccagcagca
     3241 gcagcagcgc gaaggcgacc agacagccga tctgaagaag cgcaaacagc gacatccaac
     3301 acccatccga cgcttcgacc ggggccgccg agacaggctt cgatgcctgc tccgacctgc
     3361 ccggaggtgc cgctatcctt ggactcgtct gaatgccgcc gcgcacgtag cgctggaaat
     3421 tacccttgac gcctaatttc caaaccaatg cacaaacaac aaataaagac taaaggacag
     3481 cgaataaaat cgttacaaag atattttcag tgatacctca agtcaagctc gtagtgcgtt
     3541 atttctaaag gaaaatatcc cttcgtaaca cttctaatgg tggtttaaaa gaatgggcga
     3601 tccactgctg gattgccggc cgtgcaccgg gcaaacaagg ctcagttcgt gagcacgttg
     3661 gagaccttgc tgctgaccga acgcatcgag gcgatcgccg cgaccgcgat cagcgacacg
     3721 atcaaagtga attcgaccac cgtcgcccct tgctggtttt tcaccaaact gcggaacagt
     3781 gacagcatga ggtctccgat ttcattgcta agcagcctcc aggggtgagg cagcgcttcg
     3841 ttgttgcaaa cggtacttaa agtggaatct taggtcaatt gtatttaggc aaaaacatga
     3901 agaaaattag ttatttattt gattgtattg tcttttcttc agatcagact caagcagtga
     3961 gaggtcgtcc accggcatcc accacatatc gctgaagctt cgatcaagga ctcgattgga
     4021 aagcagcgat gacgcgcgct gccgccgtcc acaagcacag cacggcgagc acgccggcaa
     4081 gccacggaaa ggcctgcggg aacaggcaga acagaacaaa cgccaggatg gtctcgctgc
     4141 cctcgataat gccggcggcg taaaagaaag ccttgtgccc gtgcgcgcca tcgtcggtct
     4201 cgccgcgctg ggccgccatc acggcgcggc cgaggaacga ggcggcggtg cagacgaacg
     4261 acgccagcag cagcgccgcc caaagcgcgt tcgccggccg ggccagggca aagccgaagg
     4321 gcacggcggc ataaaacgcc atgtcgcaaa cgatatcgag gtagccgccg aacggcgacg
     4381 gactgccgcg ccgcgcgatc gcgccgtcca gcccgtcgat cagtcgattg agcaggatga
     4441 ccaccagcgc ccagccgtaa tgggcgcccg ccagcagcgg caccgccagc agtccgatgg
     4501 ccagtccgac aatggtcatc gcatgggccg aagcgccgcg ctcggcgagc catgcgccgg
     4561 cgcggtcgag cggcggatcg acccac
//
LOCUS       DASWGA010000888         2758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1500985, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000888 DASWGA010000000
VERSION     DASWGA010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2758
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1500985"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..638)
                     /locus_tag="VF991_20490"
     CDS             complement(<1..638)
                     /locus_tag="VF991_20490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX9558885.1"
                     /translation="MNGAESLVRTLVKGGVEVCFANPGTSEMHFVGALDRVEGMRCVL
                     GLFEGVCSGAADGYYRMTDKPASTLLHLGPGLANAAANLHNAKKAGSGIVNIVGEHAL
                     YHIKYDTPLTADIEGIARPFSHWVKTSPTAKTVATDGAAAIQAARVAPGQIATLILPA
                     DTAWTEADGAAETPETPQPQKPANEAVVAAAKALKEGGAAAMLFIGGRALRAR"
     gene            820..1263
                     /locus_tag="VF991_20495"
     CDS             820..1263
                     /locus_tag="VF991_20495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558886.1"
                     /translation="MSHSVPSESSVIDTTFLVGTDLVEFDHRDLPIYQTAEARWDCFD
                     EQPYGVPLDRLFGEPGDVHIDGAMREPPQDIAALGHDPLVVLASLSDGLILPGSEPLA
                     ALETSVHIQPEAATNFDFGADAHTVVHLHDGWSWDMAGADWMFGA"
     gene            complement(1260..2453)
                     /locus_tag="VF991_20500"
     CDS             complement(1260..2453)
                     /locus_tag="VF991_20500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012650731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20 aminoacylase family protein"
                     /protein_id="HEX9558887.1"
                     /translation="MTRFTPDLLAADHAGLTAIRRDIHRHPETAFEEQRTSQIVADKL
                     QSWGIEIHRGLAKTGVVGTLKGNRPGQKTIGLRADMDALHLQEKNEFEYASVNANKMH
                     ACGHDGHTTMLLGAAKHLAASPDFAGTVHFIFQPAEEGLGGARVMIEEGLFDQFNCDA
                     VYGMHNMPGIPTGRFAIRSGAMLASSDSWQVTFKGTGGHGAMPDRGTDPTYVAAQFIV
                     AMQGIIGRNVAPSQAAVLSVGHIAGGNAGSTNVIPSEVLVSGTARSFSPAVRALLERR
                     LAELAAGIAQAGGCAAESKYFRRYPALINAVEQTSLAVEAAALTVGRENVEPNTPPIS
                     GAEDFAFMLEKKPGAYIMIGNGGTEEGGCHNVHSPLYDFNDEILTTGAAYWVNLVQLE
                     LGDSA"
BASE COUNT          435 a          914 c          923 g          486 t
ORIGIN      
        1 cgggcgcgca acgcgcggcc gccaatgaac agcatcgccg ccgcgccgcc ttccttcagc
       61 gccttggccg ccgcgacaac cgcctcgttg gcgggcttct gcggctgcgg cgtctcgggc
      121 gtctcggcgg cgccatcggc ttcggtccat gccgtgtcgg cgggcaggat cagggtggcg
      181 atctggccgg gcgccacgcg cgccgcctgg atggcggccg ccccgtcggt cgccacggtc
      241 ttggcggtgg gcgaggtttt cacccaatgc gagaacggcc gcgcgatgcc ttcgatgtcg
      301 gcggtgagcg gcgtgtcgta cttgatgtga tagagcgcgt gctcgcccac gatgttgacg
      361 atgcccgagc ccgccttctt ggcgttgtgc aggttggccg ccgcattggc gaggccggga
      421 ccgagatgca gcagcgtcga ggccggcttg tcggtcatgc ggtagtagcc gtcggcggcg
      481 ccgctgcaca cgccttcgaa caggccgagc acgcagcgca tgccttcgac gcgatcgagg
      541 gcgccgacga aatgcatctc cgacgtgccg ggattggcaa aacagacttc gacgccgccc
      601 ttgaccaggg tcctgaccag actctccgct ccgttcattg acgcccccga acgctgagaa
      661 gtaacaagaa ggggtgcacc ctaggacgtt gatgccggcc aaaccattgc gattgctcgc
      721 gaatccatgg cgaattccgg caagcgacgt tcttgcttta ttctcaacgg attattcagt
      781 atacttgaac caataatttc agaacgaaag tcattaccca tgagccattc ggtcccctcc
      841 gagagctcgg tcatcgacac gacattcctc gtcggcaccg acctcgtcga attcgatcat
      901 cgcgacctgc cgatctacca gacagctgaa gcccgctggg attgcttcga cgagcagccg
      961 tacggcgtgc cgctcgaccg cctgttcggc gagccgggcg atgtccacat cgatggcgcc
     1021 atgcgcgagc cgccacagga cattgccgcc ttaggccacg acccgctggt ggttctcgcc
     1081 tcgctttccg atggcctgat ccttccgggg tccgaaccgc tggcggcgct cgagacctcc
     1141 gtccacatcc agcccgaggc agcgacgaac ttcgatttcg gcgccgacgc ccacaccgtc
     1201 gtccatcttc acgacggctg gagctgggac atggctggcg ccgactggat gttcggcgcc
     1261 taggcggagt cgccgagctc gagctggacg aggttcaccc agtaggccgc gccggtcgtc
     1321 aggatctcgt cgttgaagtc gtagagcggc gagtgcacgt tgtggcaccc gccctcctcg
     1381 gtgccgccgt tgccgatcat gatgtaggca ccgggcttct tctccagcat gaaggcaaag
     1441 tcctcggcgc cggagatcgg cggcgtgttg ggctcgacat tctcgcggcc gaccgtcagc
     1501 gccgccgcct caaccgccag cgaggtctgc tcgacggcgt tgatcagggc gggatagcgc
     1561 cggaaatact tgctttccgc cgcgcagccg ccggcctgcg cgatgcccgc cgccagctcc
     1621 gccaagcggc gctccagcag cgcccgcacg gctggagaga agctgcgcgc ggtcccgctg
     1681 acaagcacct ccgacgggat gacattggtc gagccggcgt ttccgcctgc gatatggccg
     1741 acgctcagca ccgccgcctg gctgggcgct acgttgcgtc cgatgatgcc ctgcatcgcc
     1801 acgatgaatt gcgcggcgac gtaggtcgga tcggtgccgc gatcgggcat ggcgccatgg
     1861 ccgccggtgc ccttgaaggt gacctgccaa ctgtcggagg aagccagcat agcgccggag
     1921 cggatggcga agcggccggt cgggatgccc ggcatattgt gcatgccgta gacggcgtcg
     1981 cagttgaact ggtcgaatag gccttcctcg atcatcaccc gcgcgccgcc cagcccttcc
     2041 tcggcgggct ggaagatgaa atgcacggtg ccggcgaaat cgggcgacgc cgcgagatgc
     2101 ttggccgcgc ccagcagcat cgtcgtgtgg ccgtcatggc cgcaggcatg catcttgttg
     2161 gcgttcaccg acgcatactc gaactcgttc ttctcctgca ggtgcagcgc atccatgtca
     2221 gcacgcaaac cgatcgtctt ctggcccggc cggttgccct tcaaggtgcc gacgacgccg
     2281 gtcttggcca gcccgcgatg gatttcgatc ccccaggatt gaagcttgtc ggcgacgatc
     2341 tgcgaggtcc gctgctcctc gaaggcggtc tcgggatggc ggtggatgtc gcggcggatg
     2401 gcggtgaggc cggcgtggtc ggccgccagg agatcgggcg tgaatcgggt catggtcttc
     2461 ctttcgcagg agccaagact agccgccgcg cgggcgtccc gtcgagcaag ccggtcggcg
     2521 ccaggcgcta caagtgactg tcgcgcggac ggcgcccggc ctatagagtg ggggccggtc
     2581 cgcagcgggt cgcagagaag ggaacttcgc atgacctaca gactgtggtg gaccgtcggt
     2641 tacacctgca cgacggagcg gcagtttctc gcggccaagc cccgtctggt cccggccgtc
     2701 tacgagatgc tggacgatgc gctgcgccgg gccgcgcaag tcgcccgggc gggcggtg
//
LOCUS       DASWGA010000889         2289 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_631618, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000889 DASWGA010000000
VERSION     DASWGA010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_631618"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..886
                     /gene="pdhA"
                     /locus_tag="VF991_20505"
     CDS             <1..886
                     /gene="pdhA"
                     /locus_tag="VF991_20505"
                     /inference="COORDINATES: protein motif:HMM:TIGR03182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEX9558888.1"
                     /translation="AAKIGGFCHLNIGEEATIVGTISTLRPKDYVYSTYREHGHAIAK
                     GIDPKAVMAELFGKETGTSRGRGGSMHLFSQEHRFYGGYAIVGQALPIACGSAYAITY
                     EEKDEVVMSIFGDGATNIGAFHESLNVAKLWHLPIVFVCVNNLYGMGTAVSRASAVTE
                     IWKKACAYDMTGERVDGMDVLAVRRITDQLVAQAREKHEPSLLECLTYRYRGHSMSDP
                     DTYRGKDEIKEWQTRDAILSLGDYMKKQKMLGDQEIQKIDEEVTAQVEEAVKFAEESP
                     EPDPKDLYRDVYADEVAS"
     gene            886..1866
                     /locus_tag="VF991_20510"
     CDS             886..1866
                     /locus_tag="VF991_20510"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEX9558889.1"
                     /translation="MAILAMRDALNQALREEMKRDEAVFLLGEDIGLYDGSFKVTRGL
                     MKEFGEKRVLDTPIAEEIIIGTAIGAAMSGLRPVAEMMTVNFIMVAMDQVVNAAAHIR
                     YMFGGGTKVPLVIRTPGGGGHQLGAQHSHSHENWFAHVPGLKVVAPGTPADAKGMLKS
                     AIRDDNPVMFIENEGTYAVKGEVPDGEHLVPLDKNEVKRPGEHITICAHSRMLIVAMD
                     AAAELEKEGISAEVVDMRALRPLDMTPVIESVKKTSRLITVEEGWRSYGVGSEIASRV
                     YEEAFDYLDAPVARIGAAEVPAPYNKRLEKIAFPGKADVIVTAKALLGKN"
     gene            1907..>2289
                     /locus_tag="VF991_20515"
     CDS             1907..>2289
                     /locus_tag="VF991_20515"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX9558890.1"
                     /translation="METGKILRWLKKEGEDVKKGEPLVEIESDKANIEVEAYASGKLS
                     KIVVPEGESAPIGAVIAEIGDGASAPSAETPAAPQGQAPAAAPEQGAKPATAEAPKPQ
                     PTTPASHVAQADRAAAAAAQTAADAG"
BASE COUNT          461 a          745 c          768 g          315 t
ORIGIN      
        1 ggcggccaag atcggcggct tctgccacct caacatcggc gaggaggcga ccatcgtcgg
       61 cacgatctcg accctgcgcc ccaaggacta cgtctacagc acgtaccgcg agcatggcca
      121 cgctatcgcc aaagggatcg atccgaaggc agtgatggcc gagctcttcg gcaaggagac
      181 cggcacctcg cgtggccggg gcgggtcgat gcacctcttc agccaggagc atcgctttta
      241 cggcggctac gccatcgtcg gccaggccct cccaatcgcc tgcggcagcg cctacgccat
      301 cacctacgag gaaaaggacg aggtggtgat gagcatcttc ggggacggcg cgaccaatat
      361 cggcgccttt cacgagtcgc tcaacgtcgc caagctgtgg cacctgccga tcgtgttcgt
      421 ctgcgtcaac aacctctatg gaatgggcac ggcggtcagc cgcgcttcgg cggtcacgga
      481 gatctggaag aaggcctgcg cctacgacat gaccggcgag cgggtcgacg gcatggacgt
      541 gctggcagtg cgccggatca ccgaccagct ggtggcccag gcccgggaga aacacgagcc
      601 cagcctgctc gagtgcctga cctaccggta ccgcggccat tcgatgtccg accccgatac
      661 ctatcggggc aaggacgaga tcaaggagtg gcagacgcgc gacgccatcc tcagcctcgg
      721 cgactacatg aagaagcaga agatgcttgg cgaccaggag atccagaaga tcgacgagga
      781 ggtcaccgcc caggtcgagg aggcggtgaa gttcgccgag gagagcccgg agcccgatcc
      841 taaggacctc taccgcgacg tctacgccga cgaggtagcg agctgatggc catccttgcc
      901 atgcgcgacg ccctcaacca ggcgctccga gaggagatga agcgggacga ggccgtcttc
      961 ctgctggggg aggacatcgg cctctacgac ggatcattca aagtcacccg cggcctgatg
     1021 aaggagtttg gcgagaagcg cgtactcgac acgccgatcg ccgaagagat catcatcggc
     1081 accgcgatcg gtgccgcgat gtcgggactg cggccagtcg ccgagatgat gacggtcaac
     1141 ttcatcatgg tggcgatgga ccaggtggtc aacgccgccg cgcacatccg ctacatgttc
     1201 ggcggcggca ccaaggtgcc gctggtgatc cgcaccccgg gcggtggcgg gcaccagttg
     1261 ggggcgcagc actcgcacag ccatgagaat tggttcgccc atgtgcccgg gctgaaggtc
     1321 gtcgccccgg ggaccccagc cgacgccaag gggatgctga agtccgccat ccgcgacgac
     1381 aatcccgtga tgttcatcga gaacgaaggc acctacgctg tcaaaggcga agttcccgat
     1441 ggggagcacc tggtgccgtt ggacaagaac gaggtgaagc gccccggcga gcacatcacg
     1501 atctgcgccc attcgcgcat gctgatcgtc gccatggacg ccgccgccga actcgagaag
     1561 gaaggcatca gcgccgaggt cgtcgacatg cgggcgctgc ggccgctcga catgacgccc
     1621 gtgatcgagt ccgtcaagaa gaccagccgc ttgatcaccg tcgaagaggg ctggcgctcc
     1681 tacggggtcg gctcggagat cgcctcgcgc gtctacgagg aggccttcga ttacctcgat
     1741 gccccagtgg cgcggatcgg cgccgccgaa gtgccggcac cgtacaacaa gcggctggag
     1801 aagatcgcct tccccggcaa ggccgacgtg atcgtgacgg cgaaagccct actcggaaag
     1861 aactagaccc atggccagcg ttcaaatgcc gcgcctgtcg gactcgatgg agaccggcaa
     1921 gatcctgcgc tggctcaaga aagagggcga ggacgtcaag aagggcgagc cgctggtcga
     1981 gatcgaaagc gacaaggcca acatcgaggt cgaggcgtac gcctccggca agctgagcaa
     2041 gatcgtggtt cccgagggcg agagcgcccc catcggcgcc gtgatcgccg agattggcga
     2101 tggcgcctcg gctccgtcgg ccgagacacc cgcggcgccg caggggcagg cgccggccgc
     2161 cgcgccggag caaggcgcca agccggccac cgcggaagct ccgaagcccc agcccaccac
     2221 gcctgcgtcg cacgtggcgc aggcggatcg agccgcggcc gcagccgcgc agacggccgc
     2281 cgacgccgg
//
LOCUS       DASWGA010000890         9553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_344744, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000890 DASWGA010000000
VERSION     DASWGA010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9553
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344744"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VF991_20520"
     CDS             complement(<1..182)
                     /locus_tag="VF991_20520"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HEX9558891.1"
                     /translation="MTYTILGRCQRTGRLGIGIATFSITVGRYCYGVKSMTGVTVSQA
                     FANERNNALALRLLAQG"
     gene            284..1303
                     /locus_tag="VF991_20525"
     CDS             284..1303
                     /locus_tag="VF991_20525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014528843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate cyclase domain-containing protein"
                     /protein_id="HEX9558892.1"
                     /translation="MVDMVGEAVDRLITIEAKNRGMPHGILQPMYDAARKAAGNKPVT
                     MAAAKGLKKHLGHGDVVFIMTGAGYEPTMPKGESDGPPGAASLARILYRGLGAIPVFV
                     NEECHAHPIIASSEAAGLMVKPFDQARDRHLGAAIVNAPTQQSKVKAWISRLYADYKP
                     KAVVATERLGAGANGNVHTATGLPLTGPKSKFQGCIDIGDVVTEANRRNIFSVGIGDH
                     GNELGFGTIYDAVVNTMPKGKALATVVKTDVVVPAMMSNWGCYGIEACLAYLLRKPQL
                     IHSPEMEKRIVQACLDAGGLEAMYCTTDFLVDGLDGETSMACMQFLSNIVRKNLEPPG
                     TGLTH"
     gene            1435..2463
                     /locus_tag="VF991_20530"
     CDS             1435..2463
                     /locus_tag="VF991_20530"
                     /inference="COORDINATES: protein motif:HMM:NF025694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate cyclase domain-containing protein"
                     /protein_id="HEX9558893.1"
                     /translation="MAIDEIVGDSIDRAVNIEMRFRAGLPRGVTYPLYEAARKKQKKP
                     LTWLAAKLLKDKVKAGQHVFVVTGAGTPPSLPAGETDGPPGAAAIARAIEFGLGAKPV
                     LISEARNMPAVIKSTEAAGIAVVDEALFRQRRSCALAIDYPLGDAAGKKAAAALCKKF
                     KPAAMIFIEKVGPNTKGIYHSIMGTPRTPDKIASAYHLADFAKANGIPTIGVGDGGNE
                     IGCGVIKEAVREIQPFGKDCGCPCHGGVGTVTECDVLVFAAVSNWGAYGIAAALAGHL
                     GDREVLHDEATELRIVHASVAGGAMDGAYSRLIPYVDGTSDRVQVSLITLLHQIVENG
                     LKEYDRGF"
     gene            2487..4049
                     /locus_tag="VF991_20535"
     CDS             2487..4049
                     /locus_tag="VF991_20535"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9558894.1"
                     /translation="MTKGSRLSSGQGVTRRGFTAGALGSGLILGSGRAPAIAQGRRDL
                     RVGVFGGEFGNLSPVIRYDIQGGLVLYNIFDSLVEIDFDKRTIEPMLALEWANPDPTT
                     WRIKLREGVKWQKGFGEFTAEDVVYTWNFHLESKSFQVGTALFPLDSVKADGKYVIEV
                     KTKAPFGAFPGITLGYGGTPLSAKAHKEMGNQNYSAMPVGNGAFQIESKRGTEVTLAK
                     NPDYWRPGRPKLDRVVYRAIPDSTTRLQALVKNEFDFITHPDPKDLGEVRKNTNFTVK
                     STPGWEWDYQQFNLKKPDMPYHNKLVRQAISYAIDREAIVKEIFYGEALATDNQIPAG
                     YMGYRAPFLRYPKNGDLKKAKELMAQSGMKGYEVEVITSDKDWLRKELELVAAMVSQI
                     GITYKIKNMDMGGYNNLWLNQRFEQVLEDITLVAPDPDATSWWFLHSKGTASGYNSPA
                     MDTLLDGARSELDKTKREAMYHKIVDITLDECPLIYHCNANNIQVFNKNLTGFVPTPQ
                     EYMEKLDTVAWG"
     gene            4345..5295
                     /locus_tag="VF991_20540"
     CDS             4345..5295
                     /locus_tag="VF991_20540"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558895.1"
                     /translation="MWRYLGRRLIQVPLVLLVVSLMTFLITRATPGDPVQIMLGMQTS
                     PEAAAAMRAEFNLDRSLPEQYALWIAKVVTGDLGRSIRVNDQVTALLAERFPVSLQLA
                     AAAMIFALCVSIPLGVIAALRRNSWIDYLATGYTVLGFAVPNFGLALILIYVFSIKLD
                     WLPITGIGSSEAAAGGWWTYIRPFIVPAVALGTLQTAMLTRLLRSSMIDVLSQDYMRT
                     ARAKGLLPATIVVVHALKNAMIPFVTMVAVQFGYMIGIQVTIEYIFAVPGMGSAVLNA
                     VVTRDFPVIQGFTLVISAFFLFANIVADMLYALLDPRIRY"
     gene            5299..6231
                     /locus_tag="VF991_20545"
     CDS             5299..6231
                     /locus_tag="VF991_20545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019997763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9558896.1"
                     /translation="MALAQSPSPESPAPDAAGPRITGSLRLAARQFPRHRAAMLGLIC
                     LALICLAAALAPWVAPYDPVQIKLSAKLKPPSFEHWIGTDHFGRDVFSRLLYGGRTSL
                     SVGLLVVGFAFVMGVPLGLASGYFGGRVDNLLMRLVDAFLTFPPLLLAVALVGLLGPD
                     IQNVMLALGLVQAPVLARMVRGSTLAVREDVYVTAARALGAGPARIVLSHLLRNVMSP
                     IVVQLTIVFAAAVVAEASLSFLGFGTQPPQPSWGRDMSEARRFLGDAPWMFLAPTVAI
                     MLCVLSINFMGDGLRDALDPRAWRTRRTVTQAES"
     gene            6237..7232
                     /locus_tag="VF991_20550"
     CDS             6237..7232
                     /locus_tag="VF991_20550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007757929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558897.1"
                     /translation="MPLLSVRNLKTRFATDRGTVRAVDGVSFDLEEGEVLGLVGESGS
                     GKSVTALSIMRLVPEPPGQVTADAMTLDGTDLLALSEAEAREIRGARMAMIFQDPMRS
                     LNPVLTIGRQMTEVLRRHQKLGGAAARRRAVELLETVGIPMPEKRLRAYPHQFSGGMR
                     QRVMIAIALSCNPRLLIADEATTALDVTIQAQIIDLVKRLTRERGTSVIWISHDLGVV
                     AGLCDRVNVMYAGAIVEAGPIRELFHRPSHGYTLGLMGSTPRVDGQGPTKGARRLTPI
                     EGMPPNLIDPIPLCPFLPRCRVSVAACRARPPAPRQFGAGHWASCFADLAPRSAP"
     gene            7229..8194
                     /locus_tag="VF991_20555"
     CDS             7229..8194
                     /locus_tag="VF991_20555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9558898.1"
                     /translation="MSGLLEVEDLDVHYGLPGAAGTVKAVDGVSLSVERGRTLGLVGE
                     SGCGKSTTGYAILQLVQPSAGRVLFDGTDLCRLDKRSLRRMRRKLQIIFQDSHASLNP
                     RMPIGDLVGEALDIHGLFPGAARAGRIRELLDMVGLAGHLMERYPHELSGGQAQRVAI
                     CRALAVEPELIVCDEPVSALDVSIQAQIVNLLQDLQERLGLAYIFISHDLSVVRHVSD
                     DIAVMYLGKIVELAGKDEIYANPAHPYTQSLLSAVPVPDPDIESRRQRIILKGDLPDP
                     AHPPSGCRFRTRCPVAIAECAAVDPMQYPLAPGHWAKCIRLAEEA"
     gene            8371..8745
                     /locus_tag="VF991_20560"
     CDS             8371..8745
                     /locus_tag="VF991_20560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014283037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 truncated hemoglobin"
                     /protein_id="HEX9558899.1"
                     /translation="MSNDKKTLYERLGGYAAIAAVANDLLPRLRTDPQLGRFWAHRGE
                     DGVMREKQLLIDFLCATTGGPMYYRGRDMVLTHRGMRISDSDWTVFLGHAAATLAKFQ
                     VPEAEQRDVVAFVQGLKKEIVE"
     gene            8895..>9553
                     /locus_tag="VF991_20565"
     CDS             8895..>9553
                     /locus_tag="VF991_20565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558900.1"
                     /translation="MVAPPRTRLQFSISAIFALLILPALGAIIAFSYYENVRNLNNVA
                     QRSIDRARDEAVRMGADFFEPVAATIRLVAEVATAHPEFFRTEESRDTLYAALISAPQ
                     IDAVYTSFEDGYHRVVTRMDEDRRRSDSRIPALANWHSSYIDAYAAGAERARHRTFFE
                     KWPEAIGGYSEVSKFNVQALPHYNEARDNIGFAITEPIINPDTGYPIISMAYPIRVDG
                     K"
BASE COUNT         1672 a         3223 c         3031 g         1627 t
ORIGIN      
        1 ccctgcgcca gcagcctgag cgccagcgcg ttgttgcgct cattggcaaa cgcctggctc
       61 accgtgacgc ccgtcatcga cttcacgccg tagcaataac ggccgacggt gatcgagaac
      121 gtcgcgatcc cgatccccag ccgcccggtt ctctggcaac ggcccaatat ggtgtaggtc
      181 atgtgatctc ctgggagcgc gctcacttta acgccgaaat cggacttgtg cgatcaccgg
      241 cgaaggtgcc caattccctg gggaaaataa gaagggggac gccatggtcg atatggttgg
      301 cgaagccgtg gaccggctga tcaccatcga agccaagaac cgcggcatgc cgcacggcat
      361 tctgcagccg atgtacgatg cggcgcgcaa ggccgccggc aacaagcctg tcaccatggc
      421 cgccgccaag ggactgaaga agcacctggg ccacggcgac gtggtcttca tcatgaccgg
      481 cgcgggctat gagccgacca tgcccaaggg cgaaagcgac ggcccgccgg gcgcggcgtc
      541 gctggcgcgc atcctctatc gcggactggg cgccatcccc gtgttcgtga acgaggaatg
      601 ccacgcccat cccatcatcg cctcgagcga agccgccgga ttgatggtca agcccttcga
      661 ccaggcgcgc gaccgccatc tcggggcggc gatcgtcaac gcgccgaccc agcagtcgaa
      721 ggtcaaggcc tggatctcca ggctctatgc cgactacaag cccaaggccg tggtcgccac
      781 cgagcggttg ggcgccggcg ccaacggcaa cgtccatacg gccacgggcc tgccgctgac
      841 cggcccgaaa tccaagttcc aaggctgtat cgacatcggc gatgtcgtga ccgaggccaa
      901 ccggcgcaat atcttttccg tcggcatcgg cgatcacggc aacgagctgg gcttcggcac
      961 gatctatgac gcggtcgtca acaccatgcc caagggcaag gcgctcgcca ccgtggtgaa
     1021 gaccgacgtg gtcgtgccgg cgatgatgtc caactggggc tgctacggca tcgaagcctg
     1081 cctcgcctat ctgctgcgca agccgcagct cattcattca cccgagatgg aaaagcgcat
     1141 cgtccaggcc tgcctcgacg ccggcgggct ggaggcgatg tactgcacca ccgacttcct
     1201 ggtcgacggg ctcgatggcg agacctcgat ggcctgcatg cagttcctct ccaacatcgt
     1261 gcgcaagaac ctcgaaccgc cgggcaccgg actgacgcac tagcgttgcc ggaccgcggg
     1321 cttggtcttt cggaccgcgc gcctcatgag aagaagcggg tctggaggcc ctcaggcgca
     1381 tgtgaatgcg ccgagaccgg cgagatttga tcggggtatg taccaggaga cgtcatggcc
     1441 atagacgaaa tcgtcggcga ctcgatcgat cgggcggtca acatcgagat gcgctttcgg
     1501 gccggactgc cgcgcggcgt cacctatccg ctctacgagg cggcgcgcaa gaagcagaag
     1561 aagccgctca cctggctggc ggcgaagctc ctgaaggaca aggtgaaagc cggccagcac
     1621 gtcttcgtcg tgaccggcgc cggcacgccg cccagcctgc cggcgggcga gaccgatggc
     1681 ccgccgggcg cggcggcgat cgcccgcgcc atcgagttcg gacttggcgc caagccggtc
     1741 ctgatcagcg aagcgcgcaa catgccggcc gtcatcaagt cgaccgaagc ggcaggcatc
     1801 gccgtcgtcg acgaggccct gttcaggcag cgccgctcgt gtgcgcttgc catcgactac
     1861 cccctgggcg acgccgccgg caagaaggcg gccgcggcac tttgcaagaa gttcaagccg
     1921 gcggcgatga tcttcatcga gaaggtcggc ccgaacacca agggcatcta tcactcgatc
     1981 atgggaacgc cgcgcacgcc ggacaagatc gccagcgcct accatcttgc cgacttcgcc
     2041 aaggccaacg gcattcccac gatcggcgtc ggcgacggcg gcaacgagat cggctgcggc
     2101 gtcatcaagg aggcggtgcg cgagatccag ccattcggca aggattgcgg ttgcccctgc
     2161 catggcggcg ttggcacggt tactgaatgc gacgtgctgg tgttcgccgc ggtgtcgaat
     2221 tggggagctt acggtatcgc cgcggccctg gccggtcact tgggagaccg tgaggtgctg
     2281 cacgacgagg caacggaatt gcgtatcgtg cacgccagcg tcgccggtgg ggcgatggac
     2341 ggagcctatt cccgtctcat tccctatgtc gacggcacat cggacagggt gcaggtgagc
     2401 ctgatcacgc tgctgcacca gatcgtggaa aatggactga aggaatacga cagaggtttc
     2461 taaaaaaact tcaacaggag gcggcgatga ccaagggctc caggctctca agcgggcaag
     2521 gcgtaacgcg tcgcggtttc acggctggag cgctcggcag cggcctcatc ctcggcagcg
     2581 gccgcgcgcc ggcgatcgcc cagggcaggc gcgatctccg ggtcggggtg tttggcggcg
     2641 agttcggcaa cttgagcccg gtgatccgct acgacatcca gggcgggctg gtgctctaca
     2701 acatcttcga cagcctggtc gagatcgact tcgacaagcg caccatcgag cccatgctgg
     2761 cgctcgaatg ggccaatccc gacccgacga cctggcgcat caagctgcgc gagggcgtga
     2821 agtggcagaa gggcttcggc gagttcaccg ccgaggatgt ggtctacacc tggaacttcc
     2881 atctcgaatc gaagagcttc caggtcggca ccgcgctgtt tccgctcgac tcggtgaagg
     2941 ccgatggcaa gtacgtcatc gaggtcaaga ccaaggcgcc gttcggcgcc ttccccggca
     3001 tcaccctggg ctatggcggc acgccgctca gcgccaaggc gcacaaggag atgggcaacc
     3061 agaactacag cgctatgccg gtcggcaacg gcgccttcca gatcgagagc aagcgcggta
     3121 ccgaggtcac gctggccaag aacccggact actggcggcc gggacgtccc aagctcgaca
     3181 gggtggtcta ccgcgccatc cccgattcga cgacgcgcct gcaggcgctg gtcaagaacg
     3241 agttcgactt catcacccat cccgacccca aggacctggg cgaggtgcgc aagaacacca
     3301 acttcacggt caagtcgacg ccgggctggg aatgggacta ccagcagttc aacctcaaga
     3361 agcccgacat gccctaccac aacaagctgg tgcgccaggc gatctcctat gccatcgacc
     3421 gcgaggcgat cgtcaaggag atcttctacg gcgaggcgct ggcgaccgac aaccagatcc
     3481 cggccggcta catgggctac cgcgcgccct tcctgcgcta tcccaagaac ggcgatctga
     3541 agaaggccaa ggagctgatg gcccagtccg gcatgaaggg ttacgaggtc gaggtcatca
     3601 cctcggacaa ggactggctg cgcaaggagc tcgagctggt cgccgccatg gtgagccaga
     3661 tcggcatcac ctacaaaatc aagaatatgg acatgggcgg atacaacaac ctgtggctca
     3721 accagcgctt cgagcaggtg ctcgaggaca tcaccctggt ggcgcccgat cccgacgcca
     3781 cctcgtggtg gttcctgcac agcaagggca ccgcctcggg ctacaacagc ccggcgatgg
     3841 acaccctgct cgacggcgcg cgcagcgagc tcgacaagac caagcgcgag gcgatgtacc
     3901 acaagatcgt cgacatcacg ctcgacgaat gcccgctgat ctatcactgc aacgccaaca
     3961 acatccaggt gttcaacaag aacctgaccg gcttcgtgcc gacgccgcag gaatacatgg
     4021 agaagctcga caccgtggca tggggttgat gactgccttt tccttgcacg cctcgcccct
     4081 ctccgccgcg cagcggggga gagggagggg cccgcgcgta gcgcgcgagg gtgaggtggg
     4141 tcttgtcatc ctgagcgaag cgaaggacct catcgccgct tgcaatcggc atgagatcct
     4201 tcgcttcgct caggatgaca gagaggccgt ctttgcatcg aacaccacct cacctccccc
     4261 attgcttcgc aatgggtccc cttcctctcc cccgctgagc ggcggagagg acaatgagct
     4321 tcgtcgcgct cgcgcgtaac cgccatgtgg cgctaccttg gccgtcgtct gatccaggtt
     4381 ccgctggtcc tgctcgtcgt ctcgctgatg actttcctga tcacgcgggc gacgccgggc
     4441 gatccggtgc agatcatgct cggcatgcag acctcgcccg aggcggcggc ggcgatgcgg
     4501 gccgaattca acctcgaccg gtcgctaccc gagcaatacg cgctgtggat cgccaaggtc
     4561 gtgaccggcg atctcggccg atcgatccgc gtcaacgatc aggtgaccgc ccttctcgcc
     4621 gagcgcttcc cggtgagcct gcagctcgcc gccgcggcca tgatcttcgc gctttgcgtg
     4681 tcgatcccgc tcggcgtcat cgcggcgctg aggcgcaata gctggatcga ctatcttgcc
     4741 accggctaca cggtgctggg cttcgcggtg cccaatttcg gcctcgcgct catcctgatc
     4801 tacgtctttt cgatcaagct cgactggctg ccgatcaccg gcatcggctc gtccgaagcc
     4861 gcggccggcg gctggtggac ttacatccgg ccgttcatcg tcccggcggt ggcgctcggc
     4921 acgctgcaga ccgccatgct gacccgcctg ctgcgttcca gcatgatcga cgtgctgtcg
     4981 caggactaca tgcgcacggc gcgggcgaag gggctgctgc ccgccaccat cgtggtcgtc
     5041 catgcgctca agaacgccat gatcccgttc gtcaccatgg tggccgtcca gttcggctac
     5101 atgatcggca tccaggtcac gatcgaatac atcttcgccg ttcccggcat gggctcggcg
     5161 gtgctgaacg cggtggtcac ccgcgacttc ccggtgatcc agggcttcac cctggtgatc
     5221 tcggccttct tcctgttcgc caacatcgtc gccgacatgc tctacgccct gctcgacccg
     5281 cgcatccggt actgagcgat ggcgctggcg caatccccct ctccagagtc ccctgctccc
     5341 gatgctgccg gcccgcgcat caccggctcg ctccggctgg cggcccgcca gttcccgcgt
     5401 catcgcgccg ccatgctggg cctgatctgc ctggcgttga tctgcctggc ggcggcgctg
     5461 gcgccgtggg tcgcgcctta tgatcccgtc cagatcaagc tttcggccaa gctcaagccg
     5521 ccgtccttcg agcactggat cggcaccgac catttcggcc gcgacgtctt ttcgcgcctg
     5581 ctctatggcg gacgcacctc gctttcggtc ggcctgctgg tggtcggctt cgccttcgtg
     5641 atgggcgtgc cgctcggcct cgcttccggc tatttcggcg gccgagtcga caacctgctg
     5701 atgcggctgg tcgatgcctt cctgactttc ccgcccctgc ttctggccgt ggcgctggtc
     5761 ggcctgctgg ggccggacat ccagaacgtc atgctggcgc tggggctggt gcaggcgccc
     5821 gtgctggcgc gcatggtgcg cggcagcacg ctggccgtcc gcgaggacgt ctacgtgacc
     5881 gccgcgcggg cgctcggcgc cgggcccgcc cgcatcgtgc tgtcccatct cttgcgcaac
     5941 gtcatgtcgc cgatcgtcgt ccagctcacc atcgttttcg ccgcggcggt cgtcgccgag
     6001 gcctcgctga gctttttggg cttcggcacg caaccgccgc aaccgagctg ggggcgcgac
     6061 atgagcgagg cgcgccgctt cctgggcgac gcgccttgga tgttcctggc gcccaccgtc
     6121 gccatcatgc tctgcgtgct cagcatcaac ttcatgggcg acggcctgcg cgatgccctc
     6181 gacccgcgcg cctggcgcac gcggcgcacc gtcacccagg cggagtcctg aaagacgtgc
     6241 ccctgctcag cgtccgcaac ctgaaaaccc ggttcgccac cgaccgcggc accgtgcgcg
     6301 cggtcgacgg cgtgtccttc gacctcgagg agggcgaggt gctgggcctg gtcggcgaaa
     6361 gcggcagcgg caagagcgtg acggcgctct ccatcatgcg actggtgccc gagccgccgg
     6421 gccaggtcac ggccgacgcc atgaccctgg acggcaccga cttgctggcc ctcagtgaag
     6481 ccgaggcgcg cgagatccgc ggcgcgcgca tggccatgat cttccaggat ccgatgcgct
     6541 cgctcaatcc ggtgctcacg atcggccgcc agatgaccga ggtgctgcgc cgccaccaga
     6601 agcttggcgg cgccgcggcg cgccggcgcg ccgtcgagct cctcgagacc gtcggcattc
     6661 cgatgcccga gaaacgcctg cgcgcctatc cccaccagtt ctccggcggc atgcgccagc
     6721 gcgtcatgat cgccatcgcg ctgtcctgca atccgcgcct gctgatcgcc gacgaggcga
     6781 cgacggcgct cgacgtcacg atccaggcgc agatcatcga tctggtgaag cgcctgaccc
     6841 gcgagcgcgg cacgtcggtg atctggatca gccacgacct cggcgtggtc gccggcctgt
     6901 gcgatcgggt caacgtcatg tatgccggcg ccatcgtcga agcggggccg atccgcgagt
     6961 tgttccaccg gccgagccat ggctatacgc tgggcctcat gggctcgacg ccgcgggtcg
     7021 acggccaggg accgaccaag ggcgcgcgcc gcctgacgcc gatcgagggc atgccgccca
     7081 acctgatcga cccgatccct ctctgcccgt tcctgccgcg ctgccgcgtc tcggtcgccg
     7141 cctgccgggc gcggccgccg gcccctcgcc agttcggcgc cggccactgg gcctcctgtt
     7201 tcgccgacct cgcgcccaga tccgcgccat gagcgggctt ctcgaagtcg aggatctcga
     7261 cgtccattat ggcctgcccg gcgcggccgg cacggtgaag gcggtcgatg gcgtgagcct
     7321 cagcgtcgag cgcggccgca ccctgggcct ggtcggcgaa tcgggctgcg gcaagtcgac
     7381 gaccggctac gccatcctcc agctcgtcca acccagcgcc ggccgggtgc tgttcgacgg
     7441 caccgatctc tgccggctcg acaagcgcag cctgcgccgc atgcgtcgca agctgcagat
     7501 catcttccag gactcgcatg cctcgctcaa tccgcgcatg ccgatcggcg accttgtcgg
     7561 cgaagcgctc gatatccacg gcctcttccc cggcgctgcg cgcgccggcc gcatccgcga
     7621 gcttttagac atggtgggcc ttgccggcca tctcatggaa cgctatccgc atgagctgag
     7681 cggcggccag gcgcagcggg tcgcgatttg ccgcgcgctg gccgtcgagc ccgagctgat
     7741 cgtgtgcgat gagccggtgt cggcgctcga tgtctcgatc caggcgcaga tcgtgaacct
     7801 cctgcaggac ctgcaggagc gcctcgggtt ggcctacatc ttcatctcgc acgacttgag
     7861 cgttgtccgt catgtcagcg acgacatcgc ggtgatgtac ctgggcaaga tcgtcgagct
     7921 ggccggcaag gacgagatct atgccaaccc tgcccatccc tacacccagt cgctgctgtc
     7981 ggcggtgccg gtgcccgatc ccgacatcga gagccggcgc cagcgcatca tcctgaaggg
     8041 cgacctgccc gatcccgcgc acccgccctc gggctgccgc ttccgcacgc gttgtccggt
     8101 ggccatcgcc gagtgcgccg cggtcgaccc gatgcaatac ccgctcgcgc cgggccactg
     8161 ggccaaatgc atccggctcg ccgaggaagc gtgactgcga gaggcgacgc acaaaatcaa
     8221 tgtcggtgta tatgctgccg ttgagcgcga cggcacaatc cgccgcggtg atccggtcag
     8281 gattgactag cgtgccactc tgaagacgag caggctggtc tatggaggat gattggcctc
     8341 cagagtttcc tcggacttga ggagaacacc atgagcaacg acaagaagac cctttatgag
     8401 cgccttggtg ggtacgccgc gatcgcggcg gtggcgaatg atctgctgcc caggctccgg
     8461 accgacccgc agctcggccg gttctgggcc catcgcgggg aagacggcgt tatgcgcgag
     8521 aagcagctcc tcatcgattt cctctgcgcg accaccggcg gaccgatgta ctatcgcggc
     8581 agggacatgg tgctcaccca ccgcggcatg cgcatcagcg atagcgactg gaccgtgttc
     8641 ctcggtcatg ccgccgcaac cctggcgaag ttccaggtgc ccgaggccga acagcgcgac
     8701 gtggtcgcgt ttgttcaggg tctcaagaaa gagatcgttg aataaaaaag acaccgagcg
     8761 cctttgtgaa cgcgctgcgc ccgcgccggc ggaaatggta caaggagacg cgagagcggg
     8821 actctaactc ttgaaagtcg ggctcgctgg acaatgtcgc gattcacggt cgcgtggtga
     8881 tgaggagaag tgcattggtg gcacctccga gaaccaggct tcaattcagc atcagcgcga
     8941 tcttcgcgct gctgatcctg ccggccttgg gcgcgatcat tgcgttcagc tactacgaaa
     9001 acgtccgtaa tctgaacaac gtggcgcaac gctccatcga ccgtgccaga gacgaagcgg
     9061 tcaggatggg ggcggacttt ttcgaacctg tcgcggcgac aatacggctc gtggcggagg
     9121 ttgctacggc gcatcccgag tttttccgaa ccgaggaaag ccgggacacc ctctatgcag
     9181 cgttgatctc ggccccgcaa atcgacgcgg tctacaccag tttcgaggac gggtaccacc
     9241 gtgtcgtaac ccgcatggat gaagaccggc ggcgtagcga ttcgcgtatt cccgcccttg
     9301 ccaactggca ctccagctat atcgacgcct atgcggctgg cgcggagcgc gcacggcacc
     9361 gtacgttctt cgagaagtgg cctgaggcga tcggcggcta ctcggaggtg tcgaagttca
     9421 acgtccaggc actaccccac tataacgagg cgcgagataa catcgggttc gcaattacag
     9481 agccgatcat taacccagac accggctatc cgatcatctc gatggcctat cctattcgcg
     9541 tcgacggaaa att
//
LOCUS       DASWGA010000891         8367 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_344883, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000891 DASWGA010000000
VERSION     DASWGA010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8367
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344883"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VF991_20570"
     CDS             complement(<1..458)
                     /locus_tag="VF991_20570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558901.1"
                     /translation="MTRQALLIVGFLIAASTAHAQQQKVGDPPEASNMRLVGWSDLQA
                     RSAYQPTIHQQGNRWIAYIGHHGGTDDIPAPLNPMTGKAEPNGTSIVDVSDPANPKYL
                     RHLPGLPGTYEAGGAQMVRVCDGSRLPQGGADRAAVYMLRTFGGEAHEIW"
     gene            511..804
                     /locus_tag="VF991_20575"
     CDS             511..804
                     /locus_tag="VF991_20575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558902.1"
                     /translation="MSIENLFLFFLACGAATFPLALMALRFAASLSPAGRWSRKVGGA
                     FETALSLALVIWIVGALLFYVAALHIERQKPCDEQHTNQLTAHCKKELGAIDP"
     gene            1012..1482
                     /locus_tag="VF991_20580"
     CDS             1012..1482
                     /locus_tag="VF991_20580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007616069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9558903.1"
                     /translation="MITLTVNGQPRQVDTADDTPLLWVIREQLQMIGTKFGCGAGLCG
                     ACTVHLDGVAVRSCQTAVKQAAGKKVTTIEGLGAGKPHALQVAWEAEQVPQCGYCQSG
                     QIMQAASLLAKNPDPTRQEIVDHMDGNLCRCMTYGRIQRAIVRAAADMRAKSGA"
     gene            1486..3771
                     /locus_tag="VF991_20585"
     CDS             1486..3771
                     /locus_tag="VF991_20585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9558904.1"
                     /translation="MTHIDRKGLPLDLNRRNFLIGSSAAGLAFGYVAVTGVQGISEAL
                     AAGKFEPTAWYSIAPDGKITVMVGKAEMGQHVSSAMAQIVAEELEADWRMMNIQLVDN
                     DPKYNDPVLGALITGGSWSVRMNFDAMSRAGAAGRITLIEAGAAMMGVPAGECRASNS
                     QVIHSKTGKKVSYAKIVADGKASKVWTADELKAIKLKTPGQYTLVGQSVPQLDVPPKI
                     NGTAKYGIDAMVPGMVYGKPVMPPVRYGAKVTAVDDSAAKKVPGFVKAVTLDDKTGTT
                     SGWVVAVATSYPAAKKAAEALKVTYDKGPYATVSDQTLIDEAKRLQKDGSSGQLFVKK
                     GDQAAAIAGAAKVLEAEYFTSINIHAPLEPMNALAYEKDGVWHVHSGNQFASRTGGIA
                     AGALGIDPKHVVVHQYFIGGGFGRRLDADMVIPAVLASKAVAKPVKLIYGREDDMAMD
                     FTRPLTYQKVQAGLDANGKLVGLAHDVVCAWPTARWGIPDFLTPSVDKKGPLDGFTVN
                     GADFWYTVPNHQVRAILNELAQKATPSGQLRSVAPGWTFWAVESMIDELALAAGKDPV
                     DFRLALLDGAGDNAVGAKKLANALRTAVGRSGYGAVKLPKNSGIGVACVSSQERATAT
                     WTACAAQVEVNPNTGEFKVNRLTLAMDLGTVVNPDGVKAQIEGSALWGMSLALFEKAP
                     LKDGALQVANFNDYTPLRMSQMPDLDISIIANNDPPSGCGEPGVTVIAPAIANAIFNA
                     VGARVRSLPMTAEAVKAAMKT"
     gene            4047..5309
                     /locus_tag="VF991_20590"
     CDS             4047..5309
                     /locus_tag="VF991_20590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558905.1"
                     /translation="MTTVDHVQAAPESGPRRPHVGFKDLVWQFWVDVFGKEVQSATTY
                     SYVWMADQAGHVCLGIVLTFLLATLARWIGIMPDWSVIGGALLCSLVVSYWEFRAYRK
                     SVEDATGLFPLDRELLRANAIIAASYMVLGAGIAFFFHQSDYWLVLGLVVLGFIGLAL
                     APPWLRQKIIWQRAGLPFLFRLANAQRAVANEVAKQLQDLIEEETPSATTPRQVIVGG
                     PIGSGRTAIAAGIGTEFAFKKAMVRYVSLAALLEFAAQPPNPDYADDAGPENIRYWRW
                     SQAQVLIIDDIGPLIAAKDEAGQADLKQFELTLKHGLGPIAAVLAKCHTVWVIGDLRA
                     NGQSAMKGGTLDDFARAITKLCDAELPALVVELSNDAAAGTGPEAPRKTAVVPRVAHI
                     REVPHHESGIGSADRHITVDEAGRVTTS"
     gene            complement(5306..6727)
                     /locus_tag="VF991_20595"
     CDS             complement(5306..6727)
                     /locus_tag="VF991_20595"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF004815.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9558906.1"
                     /translation="MTADLALMPAHQLVKLYKAREASPVEAVRAALARIEAFNPQLNA
                     FQHLDPDGALRAARASEKRWKKGGKRLSDIDGVPVTIKDMVLTKGMPTRMGSLATDAE
                     GPWTVDAPAAQRLREAGTVLLGKTTSPEYGWKGVTDSALYGVTHNPWKIGRTPGGSSG
                     GGVAAEAVGMGNLAVGTDGAGSVRIPCSFTGLFGLKPTQGRVPLWPPSAQGTLSHIGP
                     MTRAVRDAALTMNVMARPDPRDLYGRPDDEEDYLKGFDKGVKGLHIAYSPTLGFVERD
                     KIDRDVAVAVENAVKVFKTLGAKVVEDSPDLQGLDPRKILNAHWQSNVAILVKTFSAE
                     KREMMDPGLLKAAEFGAHLGQEAVVTAIHQRQQLGTIMNQFMAKYDLLLTPTMPMTAF
                     AVNENAAWGGDGVDIGWTPFTLTFNLTRQPAATIPCGLDREGLPIGLQIVSGHARDAL
                     VLRAAAAYERVRPIPAPPMAHQV"
     gene            complement(6724..8136)
                     /locus_tag="VF991_20600"
     CDS             complement(6724..8136)
                     /locus_tag="VF991_20600"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF004815.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9558907.1"
                     /translation="MTDELTQQSAARLSTLYRKGKVSPVETMKAVLERTERINPEINA
                     FCRIDRALALKMARASQRRWKKGEPLSALDGVPVSVKELVRVKGWPASMGSKLTDKMP
                     ADTDAPAVARLRAAGAIVFAQSTSSEYGHKGVTDSPLNGITRNPWNIARTPGGSSGGA
                     GAAVAAGLGPIAIGTDGGGSVRIPASFTGLVGLKATFGRVPAWPPSLTGELSNTGPMA
                     RTALDCALLMNVITRPDARDAYALPEDGTNYAKKLDGKLKKLRVGFVLRFGDHPLDIE
                     VAALVTKAARDFEKLGCKVEEAHAPFSYAEAGRTFVVHWLAALQRLLQIYPESRHGEF
                     DPNLLASAKAGLRYSLQDVVNAQASRRELAIAWNLFFAKYDLLLSPAVAVQPFEIGKN
                     LPDGPDGKANALWSPYTSQFNLSRHPAATVPCGLGRDGLPIGLQIASGHYKDALVLRA
                     AARYADAHPLKFPVLPEIKP"
     gene            complement(8133..>8367)
                     /locus_tag="VF991_20605"
     CDS             complement(8133..>8367)
                     /locus_tag="VF991_20605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558908.1"
                     /translation="AQRALFGAIHLDALMKSGWNDAALAILQADDRERPTVPWTKRSL
                     GDLYRRVGRTEQALAAEYQAEQLARHYGRGKPT"
BASE COUNT         1350 a         2757 c         2882 g         1378 t
ORIGIN      
        1 ttccagatct catgcgcctc gccgccgaag gtgcgcagca tgtagaccgc cgcgcgatcg
       61 gcgccgcctt gcggcagccg gctgccgtcg cacacccgca ccatctgcgc gccgcccgcc
      121 tcgtaggtgc cgggcaggcc cggcaggtgg cgcagatatt tcggattggc gggatcgctg
      181 acgtcgacga tcgacgtgcc attgggctcg gccttgccgg tcatggggtt gagcggcgcc
      241 gggatgtcgt cggtgccgcc gtgatggccg atataggcga tccagcggtt gccctgctga
      301 tggatcgtcg gctggtaggc gctgcgtgcc tgcagatcgc tccagccgac cagccgcatg
      361 ttggaggctt ccggcgggtc gcccaccttc tgctgctggg cgtgtgcggt actcgctgcg
      421 atcaagaaac cgacgataag caatgcctgc cgcgtcatgg cgtttctccc tggttgacgg
      481 gattatacgg cgaaagcatc ttgcccggcg atgagcattg aaaacctgtt cctgttcttc
      541 ctcgcctgcg gagcggcgac ctttccgctc gctctgatgg cgctgcgctt tgcagcctcg
      601 ctgagtccgg ccggccggtg gtcgcgcaag gtcggcggcg ccttcgagac tgcgctcagc
      661 ctcgcgctgg tgatctggat cgtcggcgcc ttgctttttt acgtcgccgc cttgcacatc
      721 gagcgccaga agccgtgtga cgagcagcac accaatcaat tgacggcgca ctgcaagaag
      781 gagctgggcg ccatcgaccc gtgaacggct gcgtcgcttg acggccgtgc gttggcggga
      841 tcaagatcgc cgccaagtag aagaaacggc gctaccaaca ccaagcgtgc ggcatccggg
      901 aggaagccgt gaaccgtcgt ccgaacgggc ggtgctcgtg cggcgcgttc aaaagcttcg
      961 tgacctctcg gcctgccgat cggcgctctc ggcatcagcc acggaggaaa catgattacg
     1021 ctcaccgtca acggccagcc gcgccaggtc gacacggccg acgatacgcc cttgctctgg
     1081 gtcatccgcg agcagctgca gatgatcggc accaagttcg gctgcggcgc cggcctgtgc
     1141 ggcgcttgca ccgtgcatct cgacggcgtc gccgtgcgct cgtgccagac cgccgtcaag
     1201 caggccgcgg gcaagaaggt caccaccatc gaaggtctgg gcgccggcaa gccgcatgcg
     1261 ctgcaggtgg cgtgggaggc cgagcaggtg ccgcaatgcg gctactgcca gtccggccag
     1321 atcatgcagg ccgcgtcgct gctcgccaag aatcccgatc cgaccaggca ggagatcgtt
     1381 gaccacatgg acggcaatct ctgtcgctgc atgacctacg gccgcatcca gcgcgcgatc
     1441 gtgcgcgctg ctgccgatat gcgcgccaag tcgggagcct gagccatgac gcacatcgat
     1501 cgcaaaggtc tgccgctcga cctcaatcgg cggaatttcc tcatcggttc cagcgccgcc
     1561 ggcttggctt tcggctatgt cgcggtgaca ggcgtgcagg gcatcagcga ggcgctggcg
     1621 gccggcaagt tcgagccgac cgcatggtac tcgatcgcgc cggacggcaa gatcaccgtg
     1681 atggtcggca aggccgagat gggccagcac gtgtcgtcgg ccatggcaca gatcgtcgcc
     1741 gaggagctcg aggccgactg gcggatgatg aacatccagc tggtcgacaa cgaccccaag
     1801 tacaacgatc ccgtgctggg cgcgctgatc accggcggct cgtggagcgt gcgcatgaac
     1861 ttcgacgcga tgagccgggc gggcgccgcc gggcgcatca ccctgatcga agccggtgcg
     1921 gcgatgatgg gcgtgccggc cggcgaatgc cgcgcctcca acagccaggt catccattcc
     1981 aagaccggca agaaggtgag ctatgccaag atcgtcgccg acggcaaggc gagcaaggtg
     2041 tggaccgccg acgagctgaa ggcgatcaag ctcaagacgc ccggccagta cacgctggtt
     2101 ggccagtcgg tgccgcaact cgacgtgccg cccaagatca acggcacggc caagtacggc
     2161 atcgacgcga tggtgccggg catggtctac ggcaagcccg tgatgccgcc ggtgcgctac
     2221 ggcgccaagg tcacggcggt ggacgattcc gcggcgaaga aggtgccggg cttcgtcaag
     2281 gcggtgacgc tcgacgacaa gaccggcacg acctcgggct gggtggtggc ggtcgcgacg
     2341 agctatccgg cggcgaagaa ggcggccgag gcgctcaaag tcacctacga caaggggcct
     2401 tacgccaccg tctccgacca gacgctgatc gacgaggcca agcggctgca gaaggacggc
     2461 agctcgggcc agctcttcgt caagaagggc gatcaggccg cggcgatcgc cggcgcggcc
     2521 aaggtgctgg aggcggagta tttcacctcg atcaacatcc acgcgccgct cgagccgatg
     2581 aacgcgctgg cctacgaaaa ggacggcgtg tggcatgtcc acagcggcaa ccagttcgcc
     2641 agccgcaccg gcggtatcgc cgccggtgcg ctgggtatcg atcccaagca cgtcgtggtg
     2701 caccaatact tcatcggcgg cggcttcggc cggcgcctcg atgccgacat ggtgatcccg
     2761 gcggtgctgg cgtccaaggc cgtcgccaaa ccggtgaagc tgatctatgg ccgcgaagac
     2821 gacatggcga tggatttcac ccggccgctc acctaccaga aggtgcaggc cgggctcgat
     2881 gccaacggca agctcgtcgg cctggcccac gacgtggtgt gcgcctggcc gaccgcgcgc
     2941 tggggcatcc cggacttcct gacgccctcg gtcgacaaga agggcccgct cgacggcttc
     3001 accgtgaacg gcgcggactt ctggtacacc gtgcccaacc atcaggtccg cgccatcctg
     3061 aatgagctgg cgcagaaggc gacgccgtcg ggccagctgc gctcggtggc gccgggttgg
     3121 accttctggg cggtcgaaag catgatcgac gagctcgccc ttgccgcggg caaggatccg
     3181 gtcgacttcc ggctggccct gctcgacggc gcgggcgaca acgcggtcgg cgccaagaag
     3241 ctcgccaatg cgctccgcac cgccgtcggc cgctcgggct atggcgcggt gaaattgccc
     3301 aagaacagcg gtatcggcgt tgcctgcgtg agctcgcagg agcgcgcgac ggcgacctgg
     3361 acggcctgtg ccgcccaggt cgaggtcaat cccaacaccg gcgagttcaa ggtcaatcgc
     3421 ctcaccctcg ccatggatct cggcacggtg gtcaatcccg acggcgtaaa agcccagatc
     3481 gagggctcgg cgctgtgggg catgtcgctc gcactgttcg aaaaggcgcc gttgaaagac
     3541 ggtgcgcttc aggtcgccaa cttcaacgac tacacgccgc tgcgtatgag ccagatgccg
     3601 gacctcgaca tctccatcat cgccaacaac gacccgccgt cgggctgcgg tgagcccggc
     3661 gtcacggtga tcgcgccggc tatcgccaac gccatcttca atgccgtcgg cgcgcgcgtg
     3721 cgctcgctgc cgatgacggc ggaggcggtg aaggcggcga tgaagacctg acgccgccgg
     3781 cggcgattga aagccagagg cggcccgtgc ataccggacg ggctgcctcc tgtttttgag
     3841 cagccggggg ttgctttttt attgaaacat gcaatcctca catcgtggat tgcccgtggc
     3901 cgggtgttgg gcaggctcgt tctggccgcg tgagggggac ggaaaatacc gatggtacgc
     3961 caccacggct gtagccgtgt ccacttcacg gcgccagggg catcttaggg gcaagggatc
     4021 gtccaacgga cggaagggga tgcgtcatga cgacagtcga tcacgtgcaa gcagcgccgg
     4081 aaagcggccc gcggcggcca cacgtcggct tcaaggacct ggtttggcag ttctgggtcg
     4141 acgtcttcgg caaggaggtg cagagcgcca ccacctactc ctacgtctgg atggccgacc
     4201 aggcgggcca tgtctgcctg ggcatcgtat tgaccttctt gttggccacg cttgcgcgct
     4261 ggatcgggat catgcccgat tggagcgtca tcggcggcgc gctgctgtgc tctcttgtcg
     4321 tatcgtattg ggagttccgg gcctatcgga agtccgtcga ggacgcgacc ggcctctttc
     4381 ccctcgaccg cgagctgctg cgtgccaatg ccatcatcgc cgcgagctac atggtgctgg
     4441 gcgcgggcat cgctttcttt ttccaccagt ccgactattg gctcgtgctg ggcttggtcg
     4501 tgctcggctt tatcggcttg gccctggcgc cgccctggct gcgccagaag atcatctggc
     4561 agagggcggg cctgccgttc ctgttccgtc tcgccaacgc acagcgcgcg gtggccaacg
     4621 aggtggcaaa gcagctccag gacctgatcg aggaggaaac gccatcggcc acgactcctc
     4681 gccaggtgat cgtcggcggg ccgatcggct cgggacgcac ggcgatcgcc gccggcatcg
     4741 gcaccgaatt cgccttcaag aaggcgatgg tacgctacgt gagcctggca gcgttgctcg
     4801 aattcgccgc acagccgccg aacccggatt acgccgacga tgccggcccg gagaacatcc
     4861 gctactggcg ctggagtcag gcgcaggtcc ttatcatcga cgacatcggt ccgttgatcg
     4921 ccgcgaagga tgaggccggc caggcggatc taaagcagtt cgagctgacg ctcaagcacg
     4981 gcctcggacc gatcgctgcg gtgctcgcga agtgccacac cgtgtgggtg atcggcgacc
     5041 ttcgggccaa cgggcagtcg gcgatgaaag gcgggaccct cgacgatttc gcccgcgcga
     5101 tcaccaagct ctgcgacgcc gagctgccgg ccctggtggt cgagctgtcg aacgacgccg
     5161 cggccggcac gggtcccgag gcgccgcgca agacagccgt cgtgccgcgg gtcgcgcata
     5221 ttcgcgaggt cccgcatcac gagagcggca tcggctccgc ggaccggcat atcactgtcg
     5281 acgaggcagg ccgggtcacg acctcctaga cctgatgcgc catcggcggc gccgggatcg
     5341 ggcgcacacg ctcgtaggcc gccgccgcgc gcagcaccag cgcgtcgcgg gcatggcccg
     5401 acacgatctg cagtccgatc ggcaggccct cgcggtcgag gccgcagggg atggtggcgg
     5461 caggctggcg cgtcaggttg aaggtcaagg tgaagggcgt ccagccgata tcgacgccgt
     5521 cgccgcccca cgccgcgttc tcgttcaccg cgaaggccgt catcggcatg gtgggggtga
     5581 gcagcagatc gtacttggcc atgaactggt tcatgatcgt gccgagctgc tggcgctggt
     5641 ggatcgcggt gaccaccgcc tcctggccga gatgggcgcc gaattcggcg gccttcagca
     5701 ggccgggatc catcatctcg cgcttctccg cgctgaaggt cttcaccagg atggcgacgt
     5761 tggactgcca gtgcgcattc aggatcttgc gcgggtcgag cccctgcagg tcgggcgagt
     5821 cctcgaccac cttggcgccg agggttttga acaccttcac ggcgttttcg accgcgactg
     5881 ccacgtcgcg gtcgatcttg tcgcgctcga cgaatcccag ggtgggcgaa taggcgatgt
     5941 gcaggccctt cacgcccttg tcgaagcctt ttagataatc ctcctcgtcg tcgggccggc
     6001 catagaggtc gcgcggatcg ggccgcgcca tgacgttcat cgtcagcgcc gcgtcgcgca
     6061 cggcgcgggt catcgggccg atatgagaga gcgtgccttg cgccgacggc ggccacagcg
     6121 gcacgcgccc ctgcgtcggt ttcaggccga acaggccggt gaaggagcag ggaatgcgta
     6181 ccgagcccgc gccgtcggtg ccgacggcga ggttgcccat gccgaccgcc tcggccgcca
     6241 cgccgccgcc cgacgagccg cccggcgtgc ggccgatctt ccagggattg tgcgtgacac
     6301 cgtacagcgc cgaatcggtg acgcccttcc agccatattc cggcgaggtc gtcttgccga
     6361 gcaggacggt gccggcctcg cgcaggcgct gcgccgccgg cgcatcgacg gtccacgggc
     6421 cctcggcgtc ggtggcgagg ctgcccatgc gcgtcggcat gcccttggtc agcaccatgt
     6481 ccttgatggt gaccggcacg ccgtcgatgt cgctaagacg cttgccgccc ttcttccagc
     6541 gcttctccga ggcgcgcgcc gcgcgcaatg cgccgtcggg atcgaggtgc tggaaggcgt
     6601 tgagctgcgg attgaacgcc tcgatgcgcg ccagcgccgc gcgcacggcc tcgaccggcg
     6661 aggcctcgcg cgccttgtag agtttcacca gctggtgggc cggcatcagc gccaggtcgg
     6721 cggtcatggc ttgatctccg gaaggacagg gaatttcaac ggatgggcgt cggcatagcg
     6781 cgccgcggcg cgcagcacga gcgcatcctt gtaatggcct gatgcgatct gcaggccgat
     6841 cggcaggccg tcgcggccga gcccgcacgg caccgtagcc gcgggatggc ggctcaggtt
     6901 gaactgcgag gtatagggcg accacagcgc attggccttg ccgtccggcc cgtcgggcag
     6961 gttcttgccg atctcgaagg gctgcacggc gacggccggc gacagcagca ggtcgtactt
     7021 ggcgaagaac aggttccagg cgatcgccag ctcgcggcgc gacgcctggg cattgaccac
     7081 gtcctgcagc gagtagcgca agcccgcctt ggccgaggcc agcaggttgg ggtcgaactc
     7141 gccatggcgg ctttcgggat agatctgcag caggcgctgc agggcggcga gccaatgcac
     7201 gacgaaggtg cggccggctt cggcataaga gaagggagcg tgagcctcct cgaccttgca
     7261 gccgagcttc tcgaagtcgc gtgccgcctt ggtgacgagc gccgccacct cgatgtcgag
     7321 cgggtgatcg ccgaagcgca gcacgaagcc cactctaagc ttcttcagct tgccatcgag
     7381 tttcttggcg tagttcgtgc cgtcctccgg cagcgcatag gcgtcgcgcg cgtcgggccg
     7441 ggtgatcaca ttcatcagca gcgcgcagtc gagcgcggtg cgggccatcg ggccggtatt
     7501 ggaaagctcg ccggtcagcg agggcggcca ggccggcacg cggccgaacg tggctttcag
     7561 cccgaccagg ccggtgaagc tcgcggggat gcgcaccgag ccgccgccgt cggtgccgat
     7621 ggcgatcggt cccagccccg ccgccaccgc ggcgcccgcg ccgcccgacg agccgcccgg
     7681 cgtgcgcgcg atgttccagg gattgcgggt gatgccgttc agcggagaat cggtgacgcc
     7741 cttgtggccg tattccgagc tcgtgctctg ggcgaagacg atggcgcccg ctgcgcgcag
     7801 ccgcgccacc gcgggtgcgt ctgtatcggc cggcatcttg tcggtgagct tgctgcccat
     7861 cgaggcgggc cagcccttca cccgcaccag ctccttgacc gacaccggca cgccgtcgag
     7921 cgccgatagg ggctcgccct tcttccagcg ccgttgcgac gcgcgcgcca tcttgagcgc
     7981 cagcgcgcga tcgatgcggc agaaggcgtt tatctcggga ttgatccgtt cggtgcgctc
     8041 gagcaccgcc ttcatggtct cgaccggcga gaccttgccc ttgcggtaga gcgtggagag
     8101 tcgcgcggcg ctctgctgcg tcagctcgtc ggtcatgtcg gtttccccct gccataatgc
     8161 cgcgccagct gctcggcctg gtattcggcg gcgagcgcct gctcggtccg gccgacccgg
     8221 cgatagagat cgccgagcga gcgcttggtc cacggcacgg tcggccgctc gcggtcgtcg
     8281 gcctgcagga tggcgagggc ggcgtcgttc cagcccgact tcatcagggc gtcgagatga
     8341 atggcgccga acagcgcgcg ctgggcg
//
LOCUS       DASWGA010000892         1881 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_991490, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000892 DASWGA010000000
VERSION     DASWGA010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_991490"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1296
                     /locus_tag="VF991_20610"
     CDS             <1..1296
                     /locus_tag="VF991_20610"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX9558909.1"
                     /translation="PPGIFWVYAVTFRVFGTYQMTAIHAIALLTIAATCVLIFVAGRQ
                     LAGNRVGILAAIFYGVMTAAGNPRLLAANTEAFMMLPLTASLLLMLRRHWVWSGLLLA
                     AAGAFRQSAAVDVLLLPLAIVYFEPRESRVRGSALFIGGLAAGLLAGAVLIALTGSFT
                     GFWRWTIATLTGYASGNWAPGLVWARAKDSVVPFVVDMAVLWVAAIAWAVRWRRLDSG
                     QRLIVAWLVVSMLGSLAGGHLSWHYFIQVMGPLALLSALAVDAALRTPMRKHVAWIVA
                     IGVAVPAVGWAAYNVFADPLTYDFSPAVPQHEPVATYIRTHAGPGDRVFVWGDWPALY
                     VESDRLMASRFPGFLRGFARGSNLPPNNWDTSPEVWPELKSDLERNPPVLIVDTAAAG
                     WSDFAMYPMRNYPALQDLVASRYHLIAVVDGVGIYALNS"
     gene            complement(1293..>1881)
                     /locus_tag="VF991_20615"
     CDS             complement(1293..>1881)
                     /locus_tag="VF991_20615"
                     /inference="COORDINATES: protein motif:HMM:NF019886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HEX9558910.1"
                     /translation="QAVDEALNSLPAGHKQAVKLAYFGGMTNEAIAKHLGVGTGVVRK
                     RLRDALAVVSAHVETGAALGRKVIYGIAALAAVRWTIDFLRRIPFPATDQVAQAAVVL
                     ACGVMTASVLSASSPPPAQLTQVDRGRLSAPAPGVPLKVSTSPVAPVIGSVPIPTPAV
                     PALPTMPAVSLPVTLPVTIPSPPPIPTPLPIRRVP"
BASE COUNT          281 a          623 c          635 g          342 t
ORIGIN      
        1 ccgccgggca tcttctgggt ttacgccgtc acgttccgcg tattcggcac gtaccagatg
       61 accgcaatcc atgcgatcgc attgctgacg atcgccgcca catgcgtcct catctttgtg
      121 gccggaaggc agctggcggg caaccgagtg gggatcctcg cagcgatctt ctacggcgtc
      181 atgacggcgg cgggcaatcc gcgactcctg gctgccaaca cggaagcgtt catgatgctg
      241 ccgctcactg cgtcgctctt gttgatgctc cgccgccatt gggtctggtc gggattgctg
      301 ctcgcggccg ccggcgcatt ccggcaatcg gccgcggtcg acgtgttgct gctgccgctg
      361 gcgatcgtct acttcgagcc acgcgaaagt cgcgtgcgcg ggtcagctct gttcatcggc
      421 ggcctggccg cagggctgct ggcgggcgcc gtgctgatcg cgcttaccgg ttcctttacc
      481 ggcttctggc ggtggactat cgcgaccctg accggatatg cgagcggcaa ctgggctccc
      541 ggactggttt gggcccgggc gaaggacagc gtcgtgccat tcgtggtcga catggcagtc
      601 ctgtgggtag ccgcgatcgc gtgggctgtg cgctggagac gactggattc ggggcagcgg
      661 ctgatcgttg cctggctggt cgtgtcgatg ctgggatcgc tcgcaggcgg ccatctctcg
      721 tggcactact tcattcaggt gatgggcccc ctggctctgc tctcggcgct ggcggtcgac
      781 gcggccctcc gcacgccgat gagaaagcac gttgcctgga tcgtcgccat cggcgtcgcc
      841 gtgcccgccg tcggatgggc tgcgtacaac gtttttgccg acccgctgac ctacgacttc
      901 agcccggccg tcccgcaaca cgaaccggtc gcgacctata tccggaccca cgccggccct
      961 ggcgatcgcg tgttcgtctg gggcgactgg ccggccctat acgtcgagtc ggaccggctg
     1021 atggcgagcc ggttccccgg attcctccgc ggatttgcgc ggggttcgaa cctacccccg
     1081 aacaactggg acacgtcccc tgaagtgtgg ccggaattga agtcagatct ggagcgcaac
     1141 ccgccggtcc tgatcgtcga caccgccgcc gccggctgga gcgactttgc gatgtatccg
     1201 atgcgcaact acccggcgct ccaggacctg gtcgcgagcc gatatcacct gatcgcggtg
     1261 gtcgacggtg tcgggatcta cgccctcaat agctaaggca ctcgccgaat tggcaacggc
     1321 gtggggatgg gcggtggcga gggtatcgtc acgggcagtg tcaccggcaa gctgaccgca
     1381 ggcatggtcg gaagcgccgg cacagcgggt gttgggatcg gcaccgagcc gatcaccggc
     1441 gcgaccggcg acgtcgagac cttgagcggc acaccgggcg ccggagcgct gagccggccc
     1501 ctgtcgacct gggtcagctg agccggcggc ggggaggagg cgctgaggac cgaagcggtc
     1561 atcacgccgc aggccaggac gacggccgcc tgcgccacct gatcggtcgc cggaaagggt
     1621 atgcgccgta gaaaatcaat cgtccagcga accgccgcca acgccgcaat cccgtagatg
     1681 accttgcgac ccaatgccgc cccggtctcg acgtgcgcgc tcacaaccgc cagcgcgtcc
     1741 cgcagtcgct tgcggaccac gcctgttccg acgccgaggt gtttggcgat cgcctcgttc
     1801 gtcatgccgc cgaagtaggc gagcttgacg gcctgcttgt ggccggcagg caacgagttc
     1861 aacgcctcgt ctaccgcctg g
//
LOCUS       DASWGA010000893         3015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_991517, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000893 DASWGA010000000
VERSION     DASWGA010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_991517"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..1193)
                     /locus_tag="VF991_20620"
     CDS             complement(87..1193)
                     /locus_tag="VF991_20620"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9558911.1"
                     /translation="MQFGYFAMPSHPPERPLKDGHEWDLQVIRWLDELDFAEAWIGEH
                     HTAPWEPHPAPDLVVAQALMQTENIRLGPGGFLLPYHHPAELANRVAMLDHISGGRLN
                     FGVAASGLPSDWAMFNVDGMSGVNRDMTRESLEIILKLWSSPEPFDYKGKFWHVTKPD
                     TMFGFLKPHLKPLQSPHPPIGVAGLSKGSDTLKLAGEKGYLPMSLNLNPAYVGSHWES
                     VEIGAAKSGRTPDRGQWRMVREVFVADTDEEAMRLSAGSYMGRMMREYFLPLLGQFGF
                     LDYLKHDPSAADSDVTPEYCAKHNWVVGSPKTVVEKIEKIYDEVGGFGQLLVFGFDYA
                     DNPKAWQHSLELLSKEVLPNVQHLKPKQRKLAAE"
     gene            1268..2530
                     /locus_tag="VF991_20625"
     CDS             1268..2530
                     /locus_tag="VF991_20625"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX9558912.1"
                     /translation="MTRSRVVFVCCDGLGRDWVRPDTTPVLHELARASLWCAEHNAVF
                     PSVTRVSAASVSTGCFPARHGLHGNRMGLIEDGRIVVRDVGQPDFRAHMRRATGGTLL
                     VPALAERIADAGGCIAFSNVSPGAAYFLDPEHFGHVYHRAGSYAPGGKCIAGADALEV
                     SHDAAGDWTMTQRFCREVLCDRRPAAALLWLCDPDHTLHGVPLGSPAHADALRGAERC
                     VAEVLRTVERLRAEGDEILLLVGSDHGQETIGDCVDLEDWLASRGLEGALAAGDVAVA
                     GQGTAALLYATERGRAGLIAVLDEMRQEPWAADVVIGESLAGRGFAARGGVVAAVNMA
                     RQPEANPYGVPGRRWVAAEAGKPAPIGSGQHGGWGPDETRPFLMANDAGRSSGTVRHP
                     TSLTDIAPTIARFLGLSLEGFDGSPLHG"
     gene            2523..>3015
                     /locus_tag="VF991_20630"
     CDS             2523..>3015
                     /locus_tag="VF991_20630"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008833688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HEX9558913.1"
                     /translation="MADVLILIDQQKAMAHPKWGPRNNPDAERNIARLLAAWRERGWP
                     IIHVKHDSTFPDSPFRPGQDGNDFTPLTAPRPGETVVAKRVHSAFIGTDLAERLKAMR
                     SPPLVICGVLLANSVEATVRVAANLGFTVRLPADACWSCDKRDLTGRLWPAEDVHQLT
                     LALL"
BASE COUNT          447 a         1004 c         1064 g          500 t
ORIGIN      
        1 gttatcggcg ggatacaggc cgcccatcac cgcgttgaaa ctgcccagcg cggcggcggg
       61 cggattgagc cgtgttaagg ccaagcctat tcggccgcca gcttgcgctg cttgggcttg
      121 aggtgctgca cgttgggcag gacctctttc gacagcagct cgagcgagtg ctgccaagcc
      181 ttcgggttgt cggcatagtc gaagccgaac accagcaact ggccgaagcc gccgacctcg
      241 tcgtagatct tctcgatctt ctcgacgacg gttttaggcg agcccacgac ccagttgtgc
      301 ttggcgcaat attccggcgt gacgtccgaa tcggcggcgc tcgggtcgtg cttcagatag
      361 tccaggaagc cgaactggcc gagcagcggg aggaaatact cccgcatcat gcggcccatg
      421 taggagccgg ccgacaggcg catcgcctcc tcgtcggtgt cggcgacgaa cacctcgcgc
      481 accatgcgcc actggccgcg atcgggcgtg cggcctgact tggcggcgcc gatctcgacc
      541 gactcccagt ggctgccgac ataggccggg ttgaggttga gactcatcgg caggtagccc
      601 ttttcgccag cgagcttcaa agtgtcggag cccttgctga ggccggcgac gccgatcggc
      661 gggtgcgggc tctgcagcgg cttgaggtgc ggcttcagga acccgaacat cgtgtcgggc
      721 ttggtgacgt gccagaattt gcccttgtag tcgaacggtt cgggcgagct ccagagcttc
      781 aggatgatct cgagcgactc gcgcgtcatg tcgcggttga cgcccgacat gccgtcgacg
      841 ttgaacatcg cccagtcgct cggcaggccc gaggcggcga cgccgaaatt gagccggccg
      901 cccgagatgt ggtcgagcat ggcgacccgg ttggcgagct cggcggggtg atgatagggc
      961 agcagaaagc cgccggggcc gagacggatg ttctcggtct gcatcagggc ttgcgccacc
     1021 accaggtcgg gcgcgggatg gggctcccac ggcgcggtgt gatgctcgcc gatccaggcc
     1081 tcggcgaagt ccagctcgtc gagccagcgg atcacctgca gatcccattc gtggccgtcc
     1141 ttgaggggcc gttcgggcgg atgcgacggc atggcgaagt atccgaactg catcgtttcc
     1201 tcctgggttg ttggccgaag tcgactacca tcggcggcag cgcgcaagag ggtgagggag
     1261 ttttggcatg acaaggtccc gggtcgtgtt cgtgtgctgc gacggtctcg gccgcgactg
     1321 ggtgcggccc gacacgacgc cggtgttgca cgagcttgcc cgcgccagcc tgtggtgcgc
     1381 cgagcacaac gcggtcttcc cgtcggtcac gcgggtgtcg gcggcgtcgg tgtcgaccgg
     1441 ctgctttccc gcgcgccacg gcctgcacgg caaccgcatg gggctgatcg aggacggccg
     1501 gatcgtcgtg cgcgacgtcg gccaacccga cttccgcgcg cacatgcgcc gcgccaccgg
     1561 cggcacgctg ctcgtgccgg cgctggccga gcgcatcgcc gatgccggcg gctgcatcgc
     1621 cttttcaaac gtctcgccgg gcgccgccta cttcctcgac cccgagcatt tcggccacgt
     1681 ctatcaccgg gccggctcct acgcgcccgg cggcaagtgc atcgcgggcg ccgatgcgct
     1741 cgaggtcagc cacgatgcgg cgggcgactg gaccatgacg caacgcttct gccgcgaggt
     1801 gctgtgcgat cgtcggccgg ccgcggcgtt gctgtggctt tgcgacccgg accacacgtt
     1861 gcacggcgtg ccgctcggtt cgcccgcgca tgccgacgca ctgcgcggcg ccgaacgctg
     1921 cgtcgccgag gttctccgca ccgtcgagcg attgcgcgcc gagggcgacg agatcctgct
     1981 gctcgtaggg tccgatcacg gccaggaaac gatcggcgac tgcgtcgacc tcgaggactg
     2041 gctggcatcg cgcggtctgg agggcgcgct tgcagccggc gacgtggcgg tggcgggcca
     2101 gggcacggcc gcgctgctct atgcgacgga gcgcggacgc gccgggctga tcgcggtcct
     2161 cgacgagatg cggcaggagc cgtgggcggc cgacgtcgtc attggcgaaa gcctggccgg
     2221 ccgcggcttt gccgcgcgtg gcggcgtcgt cgccgcggtc aacatggcgc ggcagcctga
     2281 agcaaatccc tacggcgttc ccggcaggcg ctgggtggcc gccgaggcag gcaagcctgc
     2341 gcccatcggc agcggccagc atggcggctg gggacccgat gagacgcgac cgttcctgat
     2401 ggccaacgat gcgggtcgtt cgtcgggaac ggtgcggcat ccgaccagcc tcaccgacat
     2461 cgcgccgacg atcgcgcgct tcctcggcct ttcgctcgag ggcttcgacg gatcgccgct
     2521 tcatggctga cgttctgatc ctgatcgacc agcagaaggc gatggcgcat cccaagtggg
     2581 gaccgcgcaa caatcccgac gcggaacgca acatcgcgcg cctgctggcg gcgtggcgcg
     2641 agcgtggctg gccgatcatc cacgtgaagc acgattcgac ttttccggac tcgccgttcc
     2701 ggcccggcca ggacggcaac gacttcacgc ctttgaccgc gccgcggccc ggcgaaacgg
     2761 tggtcgccaa gcgcgtgcac agcgccttca tcggcaccga cctcgcagag cggctgaagg
     2821 cgatgagaag tccgccgttg gtcatctgcg gcgtgctgct cgccaactcg gtcgaggcca
     2881 ccgtgcgggt cgccgccaat ctcggcttca cggtgcgcct gccggccgat gcctgctggt
     2941 cgtgcgacaa gcgcgacctg acgggccggc tatggccggc cgaggacgtc catcagctca
     3001 cgctggcact gctcg
//
LOCUS       DASWGA010000894         1756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_226468, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000894 DASWGA010000000
VERSION     DASWGA010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226468"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1046)
                     /locus_tag="VF991_20635"
     CDS             complement(<1..1046)
                     /locus_tag="VF991_20635"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEX9558914.1"
                     /translation="MPEAKKTLPYRVLARKYRPVDFTTLVGQEAMVRTLRNAIASGRI
                     AHAFMLTGVRGVGKTTTARIIARALNCVGPDGKGSATVDPCGVCDNCKVITEDRHVDV
                     IEMDAASRTGIDDVRELIEGVRYRPVSARYKVYIIDEVHMLSEKAFNALLKTLEEPPP
                     HVKFIFATTEIRKVPVTVLSRCQRFDLKRVPQETLIAHFGRIAAAEKVEISPEALTLL
                     ARAADGSVRDGLSMLDQAIAHGGGVVDAAQVRDMLGLADRSRVLELFEKTMRGDAPSV
                     MAALAEMHDSGADPVVILQDLLELTHWVTRLKVAHEAAATSADSERAHGLAMAAKLSM
                     ASLTRAWTLLLKGL"
     gene            complement(1141..1235)
                     /gene="ffs"
                     /locus_tag="VF991_20640"
     ncRNA           complement(1141..1235)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VF991_20640"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(1339..>1756)
                     /locus_tag="VF991_20645"
     CDS             complement(1339..>1756)
                     /locus_tag="VF991_20645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012483315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitrilotriacetate monooxygenase"
                     /protein_id="HEX9558915.1"
                     /translation="SDRLGTDMSVYPLDAPVPELPETEHLKSRAALLLEMARRERLSL
                     RQLFHRVAAARGHLLLIGNPVQIADVLESWFRSGAADGFNVMPPFFPGQFDNFVGLVV
                     PILQERGLFRADYAGTTLREHLGLQRPARRPATSSP"
BASE COUNT          273 a          588 c          616 g          279 t
ORIGIN      
        1 tgcaggcctt tcagcagcag cgtccaggcg cgtgtcaggg acgccatcga cagcttggcg
       61 gccatcgcca ggccgtgggc gcgttcgctg tcggccgagg tcgccgcagc ctcgtgcgcc
      121 accttgagcc gcgtcaccca gtgggtgagc tcgagcaggt cctgcaggat gaccaccggg
      181 tcggcgcccg aatcgtgcat ctcggccagc gccgccatga ccgagggcgc atcgccgcgc
      241 atggtcttct cgaacagctc gagcacgcgg ctgcggtcgg ccaggcccag catgtcgcgc
      301 acctgcgcgg catcgaccac gccgccgcca tgggcgatcg cctggtcgag catggaaagc
      361 ccgtcgcgca ccgagccgtc ggcggcgcgc gccagcaagg tcaaggcctc gggcgagatc
      421 tcgaccttct cggcggcggc gatcctgccg aaatgcgcga tcagcgtctc ctgcggcacg
      481 cgcttgaggt caaagcgctg gcagcggctc agcaccgtca ccggcacctt gcggatctcg
      541 gtggtggcga agatgaactt cacgtgcggc ggcggctctt ccagcgtctt cagcagcgcg
      601 ttgaaggcct tctccgacag catgtgcact tcgtcgatga tgtagacctt gtagcgcgcc
      661 gagacggggc gatagcgcac gccctcgatc agctcgcgca cgtcgtcgat gccggtccgc
      721 gaggccgcgt ccatctcgat cacgtcgacg tggcggtcct cggtgatcac cttgcaattg
      781 tcgcagacgc cgcagggatc gacggtcgct gagcccttgc cgtcgggccc gacgcagttg
      841 agcgcccggg cgatgatgcg ggcggtcgtg gtcttgccga cgccgcgcac gccggtcagc
      901 atgaaggcgt gcgcgatgcg gccgctggcg atggcgttgc gcagggtgcg caccatggct
      961 tcctggccga ccagggtggt gaaatcgacg ggacggtatt tgcgggccag tacccggtag
     1021 ggaagcgtct tcttggcttc cggcatggcg ttcacccgct cagcggccgc ggccccattc
     1081 aggcccggcg gtcgtcgcgc ccggccagcc gtccgccgcg gcggcaggcg cggaagaacg
     1141 ggtgagagac cggcatgacc cgaagcgaat tcgttacggc tgcttccttc cggatctgac
     1201 cgggttggcg actgctccgc ccacaccggc ccctcgaggc ggttatatca ggagtcggac
     1261 caccgggcgc aagggaggaa gtggacggtt ttccgctctt gcgcgcacga gccgtgcgcg
     1321 gtggatttgg ccaccgaatc aagggcttga ggttgctggt cgcctggcag ggcgttgcag
     1381 gccgagatgc tcgcgcagcg tcgttccggc atagtcggcg cgaaacaggc cgcgctcctg
     1441 caagatcggc accaccagcc cgacaaagtt gtcgaattgc ccgggaaaga acggcggcat
     1501 cacgttgaag ccgtcggcgg cgccggagcg gaaccagctt tccagaacgt cggcgatctg
     1561 caccggattg ccgatcagca gcagatggcc gcgcgccgcc gccacccgat ggaagagctg
     1621 gcgcaggctc agcctttcgc gccgcgccat ctccagcagg agggcggcgc ggctcttgag
     1681 atgctcggtc tcgggcagct caggcaccgg agcgtccagc ggatagaccg acatgtccgt
     1741 gcccagccgg tcggac
//
LOCUS       DASWGA010000895         3752 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1116779, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000895 DASWGA010000000
VERSION     DASWGA010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3752
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1116779"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1053
                     /locus_tag="VF991_20650"
     CDS             <1..1053
                     /locus_tag="VF991_20650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9558916.1"
                     /translation="NYTGGTTGKSKGAIRRHRSTAAMSVAVAADFELPEVPRYLAAAP
                     ITHVSGTKVLPSLLKGGTVHLLKGFEPEKFLATLSREKINCTLMVPTMIYVLLDHPRL
                     DKTDLSSLELILYGASPMSPTRLVEGLQRIGPIFSQLYGQTECYPVSVLRKADHDTRR
                     PELFASCGFPIASCSVTLRDEDNNEVKAGEAGEICVRAPHAMEQYWKRPEQTAETFKG
                     GWLHTGDIARADERGYLYIVDRKKDMIVSGGFNIFPREVEDVLSSHPGVAMAAVIGVP
                     HEKWGEAVTALIVAKPGVRPTAEALMQLVKDRKGGPHAPKQVEFVDSLPLTAVGKVDK
                     KVLRAKYWAGQTRQVG"
     gene            1353..1835
                     /locus_tag="VF991_20655"
     CDS             1353..1835
                     /locus_tag="VF991_20655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558917.1"
                     /translation="MAARRIASGAALAAAAFLIAGCQLGAPPPQTASLAPTVDARQKE
                     IDDRKDEMIRQLAHCESGGWGPSDRPIYGGRGAYLGRLQFTVQTVIGYQLKRDGTRLS
                     RQEAIDLAHDYDRAASLAKYMIFELEEPFHWPLCSRKIALRNEMANIKELTNQAALVR
                     "
     gene            complement(1899..3101)
                     /locus_tag="VF991_20660"
     CDS             complement(1899..3101)
                     /locus_tag="VF991_20660"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003572205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX9558918.1"
                     /translation="MFEVAERLRNVKVSASAAMTRKVRELRAQGVKIVGLSSGEPDFP
                     TPTHAIEAAHKAALAGDTKYPPIDGVKPLKEAIQRKFKRDNHLDYALEEIMVSNGSKQ
                     IMYDALMASVNPGDEVIIPAPGWISYADQATVAGAKPVPVSCPENNHFKLRAADLDAA
                     ITPSTKWVVLNFPNNPTGAVCSRAEMREVADVLLGHPHVLVMADDVYEHLTYDGFGFC
                     TVAEVEPRLKERTLTVNGASKAYAMTGWRVGFAGGPRPLIAAMANMQGQIGSGISTIG
                     QAAATAALDGPQGLIKERAADYQKRRDEVVDMLRQAKGITCHKPEGAFYVFPNIAGCI
                     GKTTPGGRRIATDTDFVTALLEEKHVATVQGAAYGMSPYFRISYATDMASLREGCRRI
                     QEFCSELK"
     gene            complement(3107..>3752)
                     /locus_tag="VF991_20665"
     CDS             complement(3107..>3752)
                     /locus_tag="VF991_20665"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9558919.1"
                     /translation="SWPMAAMLSAYAAFFSFAYRDLTAATGAVLLFGAIQLTMMGYGL
                     WTGERLRGLSLVGLAITLAGLVGLLLPGLAAPPPLAALLMLGAGVAWGVYSLLGRGAG
                     EPIAATGGNFLRSVPFAALLALSAAGRETADLTGTLYAVVSGAVTSGLGYVLWYAALP
                     ALRATSAATIQLSVPAIAAIGGVVLLAEPITMRLLLASVAILGGIALTIHRKDS"
BASE COUNT          639 a         1265 c         1250 g          598 t
ORIGIN      
        1 aactacaccg gcggcacgac gggcaagtcc aagggcgcga tccgccgcca ccgctcgacc
       61 gccgccatgt cggtggcggt ggccgccgac ttcgagttgc ccgaggtgcc gcgctacctg
      121 gcggcggcgc ccatcaccca cgtttccggc accaaggtcc tgccctcgct gctcaagggc
      181 ggcacggtgc atctgttgaa aggcttcgag ccagaaaaat tcctggccac cctctcacgc
      241 gaaaagatca actgcaccct gatggtgccg accatgatct acgtgttgct ggatcatccc
      301 cggctggaca agaccgacct ctcctcgctc gagctgatcc tctacggcgc ctcgccaatg
      361 tcgccgacgc ggctggtcga ggggctgcag cgcatcgggc cgatcttcag ccagctctac
      421 ggccagaccg aatgttatcc ggtgagcgtt ctgcgcaagg ccgatcacga caccagacgt
      481 cccgagctgt tcgcctcctg cggctttccc atcgcctcgt gcagcgtgac cttgcgcgac
      541 gaggataaca acgaagtgaa agcgggcgag gcgggcgaga tctgcgtgcg cgccccgcac
      601 gccatggagc agtactggaa gcggcccgag cagacggccg agaccttcaa gggcggctgg
      661 ttgcataccg gcgacatcgc ccgcgccgac gagcggggct atctctacat cgtcgatcgc
      721 aagaaggaca tgatcgtgtc gggcggcttc aacatctttc cgcgcgaggt cgaggacgtg
      781 ctgtcatcgc atcccggcgt cgccatggcc gccgtgatcg gcgtgccgca cgagaagtgg
      841 ggcgaggcgg tgaccgcctt gatcgtcgcc aagcccggcg tgcggccgac ggccgaggcg
      901 ctgatgcagc tcgtcaagga ccgcaagggc ggcccgcacg cgcccaagca ggtcgaattc
      961 gtcgacagcc tgccgctcac cgccgtcggc aaggtcgaca agaaggtgct gcgcgcgaag
     1021 tactgggcgg gacagacgcg gcaggtcggc tgatctcgtt cgctgtcatc tcgggcggag
     1081 taacctccgc cctgaagcgc agcgaaggat ctcatcgcca gcagagatcg acgacaccgt
     1141 cgccttggaa gcggcgaacg tgtttggctt ccatgagatg cttcgctgcg ctcagcatga
     1201 cagaaggcag cacctgacag aggcaacctg tcgcagacag tggatgactc ggcggaagtt
     1261 cacgacgcgt tcccgcttcg gtcaccatca tcgcaccaca atcttggcct gcagggttta
     1321 cctcggcccc ggagtcgtgg cagcagtggc tgatggcagc acgacgaata gcttccggcg
     1381 ccgccctcgc ggccgccgcc ttcctcattg ccggatgcca gctcggcgca ccaccgccgc
     1441 agaccgcgtc gctcgcaccc acggtcgatg cccgccagaa agaaatcgat gaccgcaagg
     1501 acgagatgat ccgccagctc gctcattgcg aaagcggcgg ctggggcccg tcggaccggc
     1561 cgatctatgg cggccgcggc gcctatctcg ggcggctgca gttcaccgtg cagaccgtga
     1621 tcggctacca gctcaagcgc gacggcaccc ggctctcacg ccaggaggcg atcgacctcg
     1681 cccacgacta cgaccgcgcg gcgtcgctcg ccaagtacat gatcttcgag ctcgaggagc
     1741 cgtttcactg gccgctgtgc tcgcgcaaga tcgccctgcg caacgagatg gccaacatca
     1801 aagaattgac gaatcaggcg gctttggtcc gctgaccgct gcgccgcttg cgcgccgatg
     1861 ccgagcgcgc cgcactggcg cacgctggtt gccctgagct acttgagctc gctacagaat
     1921 tcctgaatgc gccggcagcc ctcgcgcaag ctcgccatgt cggtcgcgta ggagatgcgg
     1981 aagtagggac tcatgccgta ggccgcgccc tgcacggtgg cgacatgctt ttcctcgaga
     2041 agcgccgtga cgaaatcggt gtcggtggcg atccgccgac cacccggcgt cgtcttgccg
     2101 atgcagcccg cgatgttggg gaagacatag aacgcgcctt cgggcttgtg gcaggtgatg
     2161 cccttggcct ggcgcagcat gtccaccacc tcgtcgcgcc gcttctggta gtcggccgcg
     2221 cgttccttga tcaggccctg cggcccgtcg agtgccgcgg tggcggcggc ctggccgatg
     2281 gtcgagatgc ccgagccgat ctggccctgc atgttggcca tggcggcgat cagcggccgc
     2341 ggtccgccgg cgaagccgac ccgccagccg gtcatggcat aggccttcga cgcgccgttc
     2401 accgtgagcg tgcgctcttt caggcgcggc tcgacctcgg ccacggtgca gaagccgaag
     2461 ccgtcatagg tcaggtgctc gtagacgtcg tcggccatga ccagcacgtg cggatggccg
     2521 agcagcacgt cggcgacctc gcgcatttcg gcgcgcgagc agaccgcgcc ggtgggattg
     2581 ttgggaaagt tcagcaccac ccatttggtg ctgggcgtga tggccgcatc gaggtcggcg
     2641 gcacgcagct tgaaatggtt gttctccggg cacgacaccg gcaccggctt ggcgcccgcc
     2701 accgtcgctt ggtcggcata ggagatccag cccggcgcgg ggatgatcac ctcgtcgccc
     2761 gggttcacgc tcgccatcag ggcgtcgtac atgatctgct tgctgccgtt ggagaccatg
     2821 atctcctcca gcgcatagtc gaggtgattg tcgcgcttga acttgcgctg gatcgcctcc
     2881 ttcaagggct tcacgccatc gatcggcgga tacttggtgt cgccggcgag tgccgccttg
     2941 tgcgcggcct cgatggcatg cgtcggcgtg gggaaatcgg gctcgccgga cgacaggccg
     3001 acgatcttca cgccctgggc gcgcagctcg cgcaccttgc gggtcatggc ggccgaggcc
     3061 gacactttta cgttcctgag gcgctcggcg acttcgaaca tgatcgttat gaatccttcc
     3121 tgtgtatcgt gagcgcgatg ccgcccagga tcgccaccga ggccaacagt agccgcatgg
     3181 tgatcggctc ggcgagtagc actacgccgc cgatcgccgc aatggccggc acgctgagct
     3241 ggatggtcgc ggccgaggtc gcccggagcg ccggcagggc ggcgtaccac aggacatagc
     3301 ccagtcccga ggtcaccgcg cccgacacca cggcatagag ggtgcccgta agatcggctg
     3361 tttcccggcc ggcggccgac agggcgagca gcgcggcgaa cgggacggag cgcaggaaat
     3421 tgccacccgt cgcggcgatg ggctcgccgg cgcctcttcc gagcagcgaa tagacgcccc
     3481 acgccacgcc cgcgcccagc atcagcagcg cggcgagcgg cggcggcgcg gcgagacccg
     3541 gcagcagcag gccgaccagg ccggccagcg tgatggcaag gccgaccagg ctcagcccgc
     3601 gcaggcgctc gcccgtccat agcccgtagc ccatcatggt gagctggatg gcgccgaaca
     3661 gcaggaccgc gccggtcgcg gccgtaaggt cgcggtaggc gaaggagaag aaggcggcat
     3721 aggccgacag catggcggcc atcggccagc tt
//
LOCUS       DASWGA010000896         3892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_105005, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000896 DASWGA010000000
VERSION     DASWGA010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105005"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..977)
                     /locus_tag="VF991_20670"
     CDS             complement(<1..977)
                     /locus_tag="VF991_20670"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEX9558920.1"
                     /translation="MADTRDDLEGIAARSAAMPHEIDAAKAAAQKINTGRELTPPEQF
                     ALEAIIIPDKRPAVDIIGGDFHISHPLWTHFETDPAIKQRLLRVIPSVGRIELPGHPS
                     LPYGGTGFVVGSDLLMTNRHVAEIFATGLGNRMISFKAGSAAGIDFKRERDRPDSLFL
                     KVVEVVMIHPYWDMALLRVAGLGPAQVPLTLSLRNPQDMVDQDVAVIGYPAFDPRNDA
                     AVQNKVFDGVYYVKRLQPGKLRPRERVDSFGNNVLAAAHDSSTLGGNSGSAVFDAATG
                     QVIALHFGGVYLKSNFGVPACELARDERVIAAKVKFDEGAKAQPIEWDDA"
     gene            1391..3592
                     /locus_tag="VF991_20675"
     CDS             1391..3592
                     /locus_tag="VF991_20675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HEX9558921.1"
                     /translation="MSTDQAQSAAALPDDVVAETPFYIPATGTATRPRRTLKYGDTFA
                     VVDTYGDIGASAGDADGLFHDDTRFLSHLELLVDGQPPLLLGSNLRDDNSLLSIDLTN
                     PDFYVDGRIVLQKDLLHISRTIFLWRDAAYQRLAVRNHGDRSIALSLSILYRSDFADV
                     FEVRGLHRPRRGSTTQRVIGAERVLLLYSGLDGASRSTTLTFDPPPSELAPGKAVYRL
                     DLAPGEMRPIFLVVGCNQPADRRPVGFTKGLLSVRRELREDTREGTTVETSNALMNEI
                     LCQAAADLQMLMTETPQGRYPYAGIPWYSTTFGRDGLITALQMLWYDPGVAQGVLRRL
                     AAYQATKIDPLSDAQPGKILHEMRRGEMAALHEVPFGLYYGSVDATPLFVLLAGLYGE
                     RTNDLETVAGLWPAIEAALGWIDGLGDPDGDGFIEYRRATELGLLNQGWKDSYDAIFH
                     ADGRLAEGQIALAEVQGYVFAAKTVIARCARRLGRVDDARRLEDDAKRLARRFDAAFW
                     CPELGTYALALDGAKQPCRVRTSNAGQLLFTGIMPADRAAEVAAGLLQPHFFSGWGIR
                     TVAKGEARYNPMSYHNGSVWPHDNALIALGLARYGLKRPVERLFKALFDAATYMDLRR
                     LPELFCGFQRQPSRGPTLYPVACSPQAWASATPFSLIEASLGLVLDPRHHEVRFCNPG
                     LPAFLDEVTLRNLRLGDSSVDIKVRRHRDDVSLEILRTHGTKLQISLVSSR"
     gene            3683..>3892
                     /locus_tag="VF991_20680"
     CDS             3683..>3892
                     /locus_tag="VF991_20680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX9558922.1"
                     /translation="MAFAIVAAAAQTTPTEGVGTPSVTVLDKQEVQGILGRDVRSTAD
                     ENMGRIVDVLVDGAGTARAAIIDFGG"
BASE COUNT          630 a         1333 c         1261 g          668 t
ORIGIN      
        1 gcatcgtccc attcgatggg ctgggccttg gcgccttcgt cgaacttgac cttcgccgcg
       61 atcacgcgct cgtcgcgcgc gagctcgcac gccggcacgc cgaagttgga tttcaaatag
      121 accccgccga agtgcagggc gatcacctgc ccggtcgcgg catcaaagac ggcagagccc
      181 gagttgccgc ccaaggtgga actatcgtgc gcggctgcga gcacgttgtt gccgaagctg
      241 tcgacccgtt cgcgcggccg cagcttgccg ggctgcaggc gcttcacgta gtacaccccg
      301 tcgaatacct tgttctgcac cgccgcatcg ttgcgcgggt cgaacgccgg atagccgatc
      361 accgcgacat cctggtcgac catgtcctgc ggattgcgca gggaaagcgt gagggggacc
      421 tgggccggcc cgaggcccgc gacacgcaac agcgccatgt cccaataggg gtggatcatc
      481 accacctcga ccaccttgag gaacaggctg tcgggtcgat cccgctcgcg cttgaagtct
      541 atgccggccg ccgagcccgc cttgaacgaa atcatccggt tgccgaggcc ggtcgcgaag
      601 atctcggcga cgtgccggtt ggtcatcagc agatcgctgc cgacgacaaa accggtcccg
      661 ccatagggca gcgagggatg gcccggcagc tcgatgcgtc caaccgacgg aatgacccga
      721 agaaggcgct gcttgatggc cgggtcggtt tcgaaatgcg tccatagcgg gtggctgatg
      781 tggaagtcgc cgccgatgat gtcgacggcc ggccgcttgt ccggaatgat gatggcctcc
      841 agcgcaaact gctccggagg cgtcagctcg cgacccgtgt tgatcttttg agccgctgcc
      901 ttggcggcgt cgatttcatg cggcatagcg gcgctacgcg ctgcgatgcc ttccaaatcg
      961 tcgcgggtgt cggccatcgc ttcgagaccg ccggttggcg agacctggcg gaggaattgc
     1021 ttggctattt cggtgcgatc gtgagccatg ctggcgctcc ctgttgcggc gaccgatatc
     1081 gcgcttcggc ctacgactcc ccccttcgac cgatactaag cacaatcctc aagtcatgca
     1141 accacaagtc gcagattgtc cgatcgctaa accggctcga ggcggagctt tgccggcttt
     1201 ccgtacagct cggcgccgcc ggagaatggc aaaactgccc cgatcccgat gggctcggcg
     1261 gaatttgcag gggttgaccc ggcagtgcgc tcgccccttg atgttggcga gcttatcgcc
     1321 ttagtcctgg agcctgaagc atcgtaagac gttaacgcgc ggaactcccg ggccaaccga
     1381 tcgaggtacc atgtcgaccg atcaagctca gagcgcggcg gcactgcccg acgacgtcgt
     1441 cgccgagacg ccgttttaca ttccggcgac gggaacggcg acccggccgc gccgcacctt
     1501 gaagtacggc gacacttttg ccgtcgtcga cacctacggc gacatcggcg cttccgccgg
     1561 agatgccgac gggctgtttc acgacgacac gcgttttctg tcgcacctcg agctgctggt
     1621 ggatggccag ccgccattgc tgctcggctc caacttgcgc gacgacaaca gcctgctgtc
     1681 gatcgacctc accaatccgg acttctacgt cgatgggcgg atcgtgctgc agaaggacct
     1741 gctgcacatc tcgcgcacga tcttcctgtg gcgcgatgcc gcctatcagc ggctggcggt
     1801 gcgcaatcac ggcgaccgca gcatcgctct ctcgctgtcg attttgtacc gaagcgattt
     1861 cgccgatgtg ttcgaggtcc gcggcctgca ccgcccgcgc cgcggcagca ccacgcaacg
     1921 cgtgatcggc gccgagcgcg tgctgctgct gtacagcggc ctcgacggcg cctcgcgcag
     1981 caccacgctg accttcgacc cgccgcccag cgagctcgcc cccggcaagg ccgtctatcg
     2041 gctcgacctg gcgccgggag aaatgcgtcc gatcttcctg gtcgtcggct gcaaccagcc
     2101 ggctgaccgg cgccccgtgg gattcaccaa aggcctgctg agcgtgcggc gcgaactgcg
     2161 cgaggacacg cgcgagggca cgacggtcga gacgtccaac gcgctcatga acgagattct
     2221 gtgccaggcc gccgccgatc tgcagatgct gatgaccgag acgccccaag gtcgttatcc
     2281 ctatgccggc atcccctggt attcgaccac gttcgggcgg gacggcctca tcaccgcctt
     2341 gcagatgctg tggtacgatc ccggcgtggc gcagggcgtg ctgcgccggc tggccgccta
     2401 tcaggccacg aagatcgacc ccttgtcgga tgcccagccg ggcaagatcc ttcacgaaat
     2461 gcgccgcggc gagatggccg ccctgcacga agtgccgttc gggctctact acggcagcgt
     2521 cgacgccacg cccctgttcg tcctgctggc cggcctctat ggcgagcgca ccaacgacct
     2581 cgagacggtc gccgggcttt ggcctgccat cgaggcggcg ctgggctgga tcgacgggct
     2641 gggcgatccg gacggcgacg gcttcatcga gtatcggcgc gcgaccgagc tggggctgct
     2701 caaccagggc tggaaagatt cctacgacgc gatctttcac gccgacggcc gcctggccga
     2761 aggccagatc gcactggccg aagtccaggg ctacgtcttt gccgccaaga cggtgatcgc
     2821 gcgctgtgcg cgccgcctcg gccgggtcga cgacgcgcgc cggctcgaag acgacgccaa
     2881 gcggctggcc cggcgcttcg acgcggcgtt ctggtgcccc gagctcggca cctacgccct
     2941 ggcgctcgac ggcgccaagc agccctgccg cgtgcgcacc tccaatgccg ggcagttgct
     3001 gttcaccggc atcatgccgg ccgaccgcgc cgctgaggtt gcggcaggcc tgctgcagcc
     3061 gcacttcttc tcgggctggg gaattcgcac cgtggccaag ggcgaggcgc gctacaaccc
     3121 gatgtcctac cacaacggtt cggtgtggcc gcacgacaac gcgctgatcg cgctcggcct
     3181 ggcgcgctac ggcctgaagc gaccggtcga acggctgttc aaggccctgt tcgacgccgc
     3241 gacctacatg gacctgcggc gcctgccgga actgttctgc ggcttccagc gccagcccag
     3301 ccgcgggccg accctctatc ccgtcgcctg ctcgccccag gcgtgggcga gcgccacgcc
     3361 gttctcgctg atcgaggcct cgctggggct cgtgctcgat ccgcgacatc acgaagtgcg
     3421 cttctgcaat ccgggactgc cggcgtttct cgacgaggtg accttgcgca atctgcggct
     3481 cggcgattcg agcgtcgaca tcaaggttcg ccgccaccgc gacgacgtct cgctggaaat
     3541 cctgcggacg cacggcacca aactgcagat ttcgctcgtc tcctcgcgct gaggcgcggc
     3601 aaccccgccc cggcgcgagg agttgatcca acggcccgtg gaggcgtcga tgtgcaagag
     3661 gttggcgatt gtccttctga cgatggcgtt cgccattgtc gccgcggcgg cccagacgac
     3721 cccgaccgaa ggcgtcggaa cgccgtcggt gaccgtcctc gacaagcagg aagtgcaggg
     3781 tattctcggc cgcgacgtgc gcagcaccgc ggatgagaac atggggcgga tcgtcgacgt
     3841 gctggtcgat ggcgcgggca ccgcccgcgc cgccatcata gacttcggcg gg
//
LOCUS       DASWGA010000897         1565 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_871344, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000897 DASWGA010000000
VERSION     DASWGA010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_871344"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..811)
                     /locus_tag="VF991_20685"
     CDS             complement(<1..811)
                     /locus_tag="VF991_20685"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX9558923.1"
                     /translation="MRRNLLRERLNAGKPSVGTHILSAWPTLVELIGHSRQYDYVEFT
                     AEYAPFDLHDLDNLGRAFELTGMSGMIKSEQTQYTHQAMRAIGAGFQSVLFADIRTVE
                     DARTAVNAVRAETTMAKGVRGRGLLGVGMRRDVGIVRQGGSPAYVDALNEVVIAIMVE
                     KKSCVDDLDAVLSVPGIDMVQFGASDFSMSIGKTGQYGHPDVLAAETRTIQTALRKGL
                     HPRVELRDPSQAPRYLEMGVKHFCIGWDVRILADWWDTKGAEMRKLLRAKPK"
     gene            884..>1565
                     /locus_tag="VF991_20690"
     CDS             884..>1565
                     /locus_tag="VF991_20690"
                     /inference="COORDINATES: protein motif:HMM:NF014766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX9558924.1"
                     /translation="MKQIKITAMTVFVTDIPVRLMRRHGSGDVAGSVKNAILKLDTDA
                     GITGWGDAAPWAVFTGTIEANVAALNVYLRPLLLGADPFRIEALMLAADHAVVGHPEA
                     KAAMEMALFDIAGQASGLPVAELLGGRCRDDIPLSFSVADPDFNRDMEMVKRLYGEGL
                     RLFKMKTGFAGHAVDLKRMERFRRELPADAELRIDYNQGMDTHEAIRQLRDVEAFRPT
                     FIEQPVPGH"
BASE COUNT          248 a          520 c          521 g          276 t
ORIGIN      
        1 tcttcggctt ggcgcgcagc agcttgcgca tctccgcgcc cttggtgtcc caccagtcgg
       61 ccaggatgcg cacgtcccag ccgatgcaga aatgttttac gcccatttcg agatagcgcg
      121 gcgcctggct ggggtcgcgc aattcgacgc gcggatgcag gcccttcctg agcgccgtct
      181 ggatggtcct ggtctcggcc gccagcacgt cgggatggcc atactggccg gtcttgccga
      241 tgctcatgga gaagtccgag gcgccgaact gcaccatgtc gatgcccggc accgagagga
      301 cggcgtcgag atcgtccacg cacgacttct tctccaccat gatggcgatc acgacctcgt
      361 tcagcgcatc gacataggcg ggtgatccgc cctggcgcac gatgccgacg tcgcgccgca
      421 tgccgacgcc taaaaggccg cggccgcgca cgcccttggc catggtcgtc tcggcccgca
      481 ccgcattcac cgccgtccgc gcgtcctcga cggtgcggat gtcggcgaac agcacgctct
      541 ggaagcccgc gccgatcgcc cgcatcgcct ggtgcgtgta ctgcgtctgc tcgctcttga
      601 tcatgccgct catgcccgtg agctcgaagg cgcggccgag attgtcgaga tcgtgtaggt
      661 cgaacggggc gtattcggcg gtgaactcga catagtcgta ctgcctggaa tggccgatca
      721 gctcgaccag ggtcggccac gctgacagga tatgcgtgcc cacgctcggc ttgccggcgt
      781 tcaggcgttc acgaagcaga ttgcggcgca tggcgtttcc ccgttgtggt tggcacgcat
      841 agtgcgcgat agactgaagc ggggaaagcg gggaggcggc cttttgaagc agatcaagat
      901 cacggcgatg acggtcttcg tcaccgacat tccggtgcgc ctgatgcgcc gccacggctc
      961 gggcgacgtc gcgggctcgg tcaagaacgc catcctgaag ctcgataccg acgccggcat
     1021 caccggctgg ggcgatgccg cgccgtgggc ggtgttcacc ggcaccatcg aggccaacgt
     1081 cgccgcgctc aacgtctatc tgcggccgct gctgcttggc gccgacccgt ttcgcatcga
     1141 ggcgctgatg ctggcggccg atcatgcggt ggtcggccat cccgaagcga aggccgcgat
     1201 ggagatggcg ctgttcgaca tcgcgggcca ggcgtcgggc ctgccggtcg ccgagcttct
     1261 gggcggccgc tgccgcgacg acataccctt gtccttctcc gtcgccgatc cggacttcaa
     1321 ccgcgacatg gagatggtga agcggctcta cggcgagggc ctgcggctgt tcaagatgaa
     1381 gaccgggttc gccggccatg ccgtcgactt gaagcgcatg gagcgcttcc gccgggagct
     1441 gccggccgat gccgaactgc gcatcgacta taaccagggc atggacacgc acgaggcgat
     1501 ccgccagctg cgcgacgtcg aggccttcag gccgaccttc atcgagcagc cggtgccggg
     1561 tcacc
//
LOCUS       DASWGA010000898         6160 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1117239, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000898 DASWGA010000000
VERSION     DASWGA010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6160
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1117239"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1102
                     /locus_tag="VF991_20695"
     CDS             <1..1102
                     /locus_tag="VF991_20695"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX9558925.1"
                     /translation="DAVSLVVHALVIACGAAALFSALFLLAGPSLYGLLGGRGPILAA
                     ALEYSNVIFAGALAYWAASALTSAVRGTGHAGVLAVVYLGAEALHIMLVPALVFGFGP
                     VPALGITGAGIATVTSFSASALVLAWYLASGRTAVTLSLRGVRLDRRLFAEILRVGAP
                     LSLHPILNNTALAAITAYAGMLGTTALASFGAAVRLEYLLYPINFGLGAAVLAMVGTN
                     IGARQYARAARIAWIATGLSACVMACLGLLVIARPDAWTALFSSDPAVLAMAASYLCI
                     VGVAYPFISPNTLISAFQSTGQPGWPLASATCRLLVVVIGGWILIHTPDASLAGLASV
                     TAAGLAVMGTILAVSFRRYARLRPPPVERPSP"
     gene            1099..2034
                     /locus_tag="VF991_20700"
     CDS             1099..2034
                     /locus_tag="VF991_20700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558926.1"
                     /translation="MTSSPLSLAGYVTLPEHKGSGGFDHADVHAATGTVYVAHTANDA
                     VDVFDPVSARHLFSIPHLPGVAGALVSNDGQIVITSNRAENTIGVFAPGRDPEVLKIP
                     VGMKPNGLAYDPTRRLVLVANVGDPAIAGSHTLSMVRLDDRAVTELPVPGRTRWTVFD
                     PDAELFYVNIADPALIVMVDAKKPGRVAGTWAIPSAGPHGLDFDRSTHRLFCACDAGR
                     LVTLDAGSGKVLSEQPLSGTPDVVFFNRMRQQLYVAVGNPGVIDVFDTATMKSLGRVE
                     TEKGAHTLAFAPSGDRVYAFLPATRRAAIYKVGDI"
     gene            2034..3050
                     /locus_tag="VF991_20705"
     CDS             2034..3050
                     /locus_tag="VF991_20705"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HEX9558927.1"
                     /translation="MAARDVIGTNAEDLLILSRADIVRLMDYADYVDAVAAAFRAAIE
                     GRAVAPPASALHVPNGSFHAKGAALLGDDSKVAIKINGNFPGNPAVNGLPTVQGVIYL
                     ADGANGRPLAVMDSIEVTINRTAAATTLAARHLARADSRVATICGAGVQGRIQLTAIA
                     AAAKLERVHVWDVNQDAVASFARDMAARLSLDVRASPDLGPVRDSDIVVACTSARRAY
                     LTPDLVRPGTFISAVGADNSDKSEIDPHLYAGSLVVVDSLEQCAEIGDLHHALAAGTV
                     TREHVHATLGEIIAGRKRGRSDPRSITLFDSSGMGLQDVAAAVAIYRRALEAGVGTRL
                     TNLY"
     gene            complement(3261..4349)
                     /locus_tag="VF991_20710"
     CDS             complement(3261..4349)
                     /locus_tag="VF991_20710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX9558928.1"
                     /translation="MKRRKFLKASGIGLATSAVAAPAIAQSVPSIKWRLTASWPKSLD
                     TIYGACETIAKFVSEATDGKFQILTFAAGEIVPALQVLDSVQNGTVEMGHTANYYYIG
                     KDPTWALFCATPFGLNARQQNAWFYDGEGTKLIDAFAQKFNVKCLSAGNTGCQMGGWL
                     NKELKEPADLNGLKFRMGGWAGQTLQKLGVVPQMIAGGDIYPALERGTIDAAEWVGPY
                     DDEKLGFHKVVKFYYYPGWWEGGTTLHLMVNLGKWNELPKSYQTIVTAAAGFANVEMQ
                     ARYDARNPLALKRLVAAGTQLRAFPQSIMEACLKASIEVNTETSAANADYKKVWDSIQ
                     AFRDDEYLWWQVAEYTYDSFMIRQRRRN"
     gene            complement(4463..5215)
                     /locus_tag="VF991_20715"
     CDS             complement(4463..5215)
                     /locus_tag="VF991_20715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9558929.1"
                     /translation="MGDIVVLDLALFIGATFAAALVAGMAGFAFGLVAAAVWLHVLTP
                     LQTTTLIVAFGLIVQGYSVWKLRRALKPARLLPFLLGGAIGLPLGVELLRWAPAAHVR
                     TAVGVCLVLFSVWSLAKPQLRRISAGGRLADGGVGVLSGILGGMTGFGGILPTIWSGL
                     RGWPKDEQRAVFQPTGVAIFLGTALMLGGTGSITADTTRLFLIGLPALLAGSWLGLKL
                     YGRLDEAGFRRVVLVLLLASGAALVAPALIGG"
     gene            complement(5234..5893)
                     /locus_tag="VF991_20720"
     CDS             complement(5234..5893)
                     /locus_tag="VF991_20720"
                     /inference="COORDINATES: protein motif:HMM:NF045135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558930.1"
                     /translation="MQRLLAIIFGMALAAVSLGVVLAADTVELVSVWNPTGALPDGCT
                     PALTGRGGAVKWVIIDSEPDGPRGVAEVSADPTDYRFPLCIADGMAFSSLGNVDASVR
                     FRAVAGKVDQAGGLAVRVKDANNYYVVRANALEDNVRLYAVIDGDRRQFAGKSVKVAT
                     NQWHTLRLRAIGDRFTVYFDGAALFEATDRRIVEPGRVALWSKADSVTEFVDLAIEPL
                     P"
BASE COUNT         1014 a         2164 c         1952 g         1030 t
ORIGIN      
        1 cgacgccgtt tccctcgtcg tccatgccct ggtgatcgcc tgcggcgcgg cggcgctgtt
       61 cagcgcgctg ttccttctcg cggggccaag cctctacggc ctgctgggcg gccgtggccc
      121 catcctcgcc gcggccctgg aatactccaa cgtgatcttc gccggggcgc tcgcctattg
      181 ggccgcgagc gcgctcacca gcgccgtgcg cggcaccggc catgcgggcg tgctggccgt
      241 ggtttacctc ggtgccgagg cgttgcacat catgctggtg cccgctctgg tcttcggctt
      301 cggtcccgtg ccggcgctcg gcatcaccgg ggccgggatc gcgaccgtga cgtctttcag
      361 cgcctcggca cttgtgctcg cctggtatct cgcttctggt cgaaccgcgg tcacgctctc
      421 gctccgcggt gtccgcctcg accgccggct gttcgccgag atcctgcgcg tcggcgcacc
      481 gctatcgctt catccgatcc tgaacaatac cgcgctggcg gcgatcaccg cctatgccgg
      541 catgctgggc acgacggcgc tcgcgagctt cggcgccgcg gtacggctgg aatatctgct
      601 ctatcccatc aatttcggcc tgggcgccgc cgtgctggcc atggtcggca ccaatatcgg
      661 cgcccgccag tacgcccgcg cggcgcgcat cgcctggatc gccaccggcc tgtcggcctg
      721 cgtgatggcc tgtctcggcc tgctggtgat cgcccggccg gacgcctgga ccgccctgtt
      781 cagcagcgat cctgcggtcc tcgcgatggc ggccagctat ctctgcatcg tcggagtcgc
      841 ctacccgttc atatcgccca atacgctgat ctcggccttc cagtcgacgg gacagcccgg
      901 gtggccgctg gcctccgcga catgccgtct gctggtcgtg gttatcggcg gatggatcct
      961 gatccacacc cccgatgcga gcctggccgg tcttgccagc gtgaccgcgg caggactcgc
     1021 ggtgatgggg accatccttg ccgtctcgtt tcgccgctat gcgcggctgc gtccccctcc
     1081 cgtggaaagg ccatccccat gacaagcagc cccctcagtc tcgccggata cgtcaccctg
     1141 ccggaacaca agggcagcgg cgggttcgac cacgccgacg tccacgccgc gaccgggacc
     1201 gtctacgtgg cgcacaccgc caacgacgcc gtcgacgtct tcgatccggt gtctgccagg
     1261 cacctgttct cgatcccgca cctgcccggc gttgccggtg cgctggtcag caacgacggc
     1321 cagatcgtca tcacctcgaa ccgcgccgag aacacgatcg gcgtgttcgc gccgggccgc
     1381 gatcccgaag tgctgaagat ccccgtcggc atgaagccga acgggcttgc ctacgatccc
     1441 acgcgacggc tggtcctggt cgccaatgtc ggcgatccgg cgatcgcggg ttcgcacacg
     1501 ctctccatgg tgcggctcga cgaccgcgcg gtcacggagc tccccgtgcc gggccgcacg
     1561 cgctggaccg tcttcgaccc cgatgcggag ctcttctatg tcaacatcgc cgatcccgcg
     1621 ctgatcgtca tggtcgatgc caaaaagccc ggccgcgttg ccggcacgtg ggcgattccc
     1681 tcggcaggcc cccacgggct cgacttcgac cgcagcacgc atcgcctgtt ctgcgcctgc
     1741 gatgccggcc ggctcgtcac cctcgatgcc ggatcaggaa aggtcctgag cgagcagccg
     1801 ctcagcggca cgcccgacgt cgtcttcttc aaccgcatgc gccagcagct ttacgtggcg
     1861 gtcggcaacc cgggcgtcat cgacgtcttc gacaccgcga ccatgaagag cctgggccgg
     1921 gtcgagacgg aaaagggcgc acacaccctg gcgttcgcgc cctccggcga ccgcgtctac
     1981 gcctttctgc ccgcgacccg tcgggcggcg atctacaaag ttggcgacat ctgatggccg
     2041 cccgagatgt catcggcacc aacgccgagg acctgctgat cctgtcccgt gccgatatcg
     2101 tgcggctgat ggactacgcc gactatgtcg acgcggtcgc agcggccttc cgcgcggcca
     2161 tcgagggccg ggccgtggcg ccgcctgcct cggccctcca tgtccccaac ggctcctttc
     2221 acgccaaggg cgccgcgctg ctgggcgatg acagcaaagt cgccatcaag atcaacggca
     2281 acttcccggg caacccggcc gtcaacggcc tgccgacggt gcagggcgtc atctacctgg
     2341 ccgacggtgc caacggccgg ccgctcgccg tgatggattc gatcgaggtc accatcaacc
     2401 gtacggctgc ggccacgacg ctcgccgccc gtcacctggc acgcgccgat tcgcgggtgg
     2461 cgacgatctg tggcgcaggc gtgcagggcc gcatccagct cacggccatc gccgcggcgg
     2521 ccaagctgga acgcgtccat gtctgggacg tcaatcagga tgccgtggcc tcgttcgccc
     2581 gcgacatggc agcaaggctc tcgctcgacg tgcgggcgag ccccgatctc ggcccggtcc
     2641 gcgacagcga catcgtcgtg gcctgcacat cggcgcgccg cgcctacctc acgcccgatc
     2701 tcgtgcggcc cggcactttc atctcggccg tcggcgctga caattccgac aaatcggaga
     2761 tcgacccgca tctgtacgcc ggcagtctcg tggtcgtcga ttcgctggag cagtgcgcgg
     2821 agatcggcga cctgcaccat gccctcgccg ccggcaccgt cacgcgcgag cacgtgcacg
     2881 ccacgctggg cgagatcatc gccggccgca agcgcggacg cagcgacccg cgctcgatca
     2941 ccctgttcga cagctccggc atgggcctgc aggacgtcgc ggccgccgtc gcaatctatc
     3001 ggcgtgcgct cgaagccggc gtcggaacgc gtctcaccaa cctttattga ccacgccttc
     3061 gctttcacct gaccaggatc gccggtgcaa taagtgcaac accggacggc gggcttcgac
     3121 gcccgctcca tggcgggcgg ccattacgcc cggaaggcgg ccggcggcaa ggtgcggcgg
     3181 gtcgagtaga ttgccgggag cgtgccactc cagcggcgcg ctcccagcga agacgtgcac
     3241 tcaaagaggc tgacgcgcct tcagttccgc ctgcgctggc ggatcatgaa gctgtcgtag
     3301 gtgtactccg cgacctgcca ccagagatat tcgtcgtcgc ggaacgcctg tatcgagtcc
     3361 caaaccttct tgtagtcggc gttggccgca gacgtctcgg tgttgacctc gatcgacgcc
     3421 ttcaaacagg cttccatgat cgactgcggg aacgcacgca attgcgtgcc cgccgcgacc
     3481 agacgcttca aggccagagg attgcgggca tcgtatctcg cctgcatttc aacgttggca
     3541 aaccccgcgg ccgcggtaac gatcgtctgg tagcttttcg gcagctcgtt ccatttgccg
     3601 aggttcacca tcaggtggag cgtggtgccg ccttcccacc aaccggggta gtaatagaat
     3661 ttcaccacct tgtggaagcc gagcttctca tcgtcgtaag gtccgaccca ttcggcagcg
     3721 tcgatggtac ccctttcgag cgccgggtag atgtcgccgc cggcgatcat ctgcgggacc
     3781 acgccgagct tctgcagcgt ctggcccgcc cagccaccca tgcggaactt gagaccattc
     3841 aagtccgccg gctccttgag ctccttgttg agccagcctc ccatctgaca gccggtattg
     3901 ccggcagaca gacacttcac attgaatttc tgggcgaagg cgtcgatcag cttcgtgccc
     3961 tcgccatcgt agaaccaggc attctgctgg cgggcattga ggccgaacgg cgtggcgcag
     4021 aacagcgccc aggtcgggtc cttgccgata tagtagtagt tggcggtatg gcccatctcg
     4081 acggtgccgt tttgcactga atcgagcact tgcaatgcgg gtacgatctc gcccgcagca
     4141 aaggtcagga tctggaattt gccgtcggtc gcctcggaaa caaatttggc gatcgtctca
     4201 caagcgccgt aaatcgtgtc gagtgatttc ggccagcttg ccgtcaatcg ccatttgatg
     4261 gacggtaccg attgggcgat agccggcgcg gcgaccgccg acgtggcgag gccgataccc
     4321 gacgctttca agaatttgcg acgtttcatg gcgttccccc atcccacttc ccaaagatga
     4381 cgcccgaact ggcatgaaca atagcaattt gccgggttgc ttggaagcca gtggcgcgga
     4441 cgggtatcga gccgcctatt tctcaaccgc cgattagcgc cggcgcgacc aaggcggcgc
     4501 ccgaggccag cagcaggacc agcacgacac ggcgaaaccc cgcctcgtcg agccggccgt
     4561 agagttttag cccgagccag ctcccggcga gcagcgccgg cagcccgatc aggaacaagc
     4621 gcgtcgtatc ggccgtgatc gatccggttc cacccagcat cagcgccgtg ccgagaaaga
     4681 tggcgacgcc ggtcggctgg aagaccgcac gctgctcgtc cttgggccag ccgcgcaggc
     4741 ccgaccagat cgtgggcagg atgccgccga acccggtcat gccgcctaaa atgccgctca
     4801 ggactccgac gccgccgtcg gccagccggc cgccggcaga gatacgccgc agctgcggct
     4861 tggcgagact ccagacgctg aacaggacga gacaaacgcc gaccgcggtc ctgacatggg
     4921 ccgccggcgc ccagcgcagc aactcgacgc cgagcggcag gccgatcgcg ccgcccagca
     4981 ggaagggcag aaggcgggcg ggcttcagcg cccgccgcag cttccacacc gaatagccct
     5041 gcacgatcag gccgaaggcg acgatcaggg tggtggtctg caagggcgtg agcacatgca
     5101 gccagaccgc cgccgcgacc aggccgaagg cgaagcccgc catgcccgcg accagcgccg
     5161 ccgcgaaggt cgcgccgatg aacagcgcga gatccagaac gacgatgtca cccatgacgg
     5221 accacgcacg gtttcacggc aacggctcga tcgcaagatc gacgaactcg gtcacgctgt
     5281 cggccttgga ccacaaagcg acccgacccg gctcgacgat gcgccggtcg gtcgcctcga
     5341 acagggctgc gccgtcgaaa tacacggtga agcggtcgcc gatcgcgcgc aggcgcaggg
     5401 tgtgccactg gttggtggcg accttcacgc tcttgccggc aaactgccgg cggtcgccat
     5461 cgatgacggc atagagccgg acattgtcct cgagcgcgtt ggcccgcacg acgtagtagt
     5521 tgttggcgtc cttcacccgg accgcgaggc cgccggcctg atcgaccttg ccggccacgg
     5581 cgcggaagcg gacgctcgca tcgacattgc cgagcgagga aaaggccatc ccgtcggcga
     5641 tgcagagtgg gaagcgatag tcggtcgggt cggcgctgac ctcggcgacg ccgcgcggac
     5701 cgtccggctc gctatcgata atcacccact ttaccgcgcc gccgcgcccg gtcagggccg
     5761 gcgtgcagcc gtcgggcaat gcgcccgtcg gattccacac cgacaccagc tcgacggtgt
     5821 cggcggcaag aaccaccccg agcgagacgg ccgccagggc cataccgaag atgatcgcaa
     5881 gcaatcgctg catgtcgccc tccatgtgtt gcgtcaccgg catcatggcg gccgattctg
     5941 agggcacggc gagcgcaaca tgagaaatca atgagaagct tgcttttctt tctcgccggg
     6001 agagactcga gagcgacatc gttagtcatg cagtggagag gtgatcgcat gcggctgctg
     6061 gtcgtcgagg acgaacgcgg catcgccagt gcgctgcgcc agggcctggg cgaatccggc
     6121 tatgccgtag accttgcgcg cgacggcatc gaggcgcgcg
//
LOCUS       DASWGA010000899         2866 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2384074, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000899 DASWGA010000000
VERSION     DASWGA010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2866
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2384074"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1009
                     /locus_tag="VF991_20725"
     CDS             <1..1009
                     /locus_tag="VF991_20725"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558931.1"
                     /translation="IAIALTAPFTGTIADVLGRKRVITAAMLAVVVPMAGAALAQDVQ
                     VLIAWRFVQGLLLPPVFAVTIAYIGDEWPPAQVAGVAGVYIAGSSIGGFCGRFIPGVL
                     GDLVGWRGAFLALAGLSFMGAILVALMLPREKGFVRSDGLRASARQMLRHLKNPQLLA
                     TYAIGFGVLFNFIAVFTYVSFHLAAPPYLFSSTLLGAIFVTYLVGTVVSPMTGWAIAR
                     LGRRRFILAVIAAWACGAVLLLAPPVSAIIAGLVLCAACGMLCQTISTGYVTAIAKDG
                     RSSAVGLYVTSFYIGGSMGAFLPGLAWNSGGWPACIAMVIAMLAGMALIATLAYGRVT
                     A"
     gene            1042..1728
                     /locus_tag="VF991_20730"
     CDS             1042..1728
                     /locus_tag="VF991_20730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX9558932.1"
                     /translation="MTTPTQSQLDFLQSIDTPTVCNLIEIVAPERRGFGYTVKHLHCP
                     FPELPPIVGFAKTVTFKAKDAVPLGDGGYMQKRLDYLDYVAGSPRPSIMVMEDLDGEH
                     VGYGAFWGEVQSNVHKALGALGVVTNGSIRDIPMIAPGFQMLAGSIVPSHAYVHVVDY
                     GIDVNVVGMAVKSGDLIHADRHGAIVVPTDKIDAMKTALEGLSAREAKIIAAAKAGGD
                     VAAIKAAMKG"
     gene            1757..>2866
                     /locus_tag="VF991_20735"
     CDS             1757..>2866
                     /locus_tag="VF991_20735"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9558933.1"
                     /translation="MDRRDTNPAFSTRRLKLGTFQTNLDSGCVMSDLDGRLDITWPNT
                     VALARLAEEMEFEALVPVARWQGFGGATNPQGPGFEAYTWAAGIAASTATPGVFATSH
                     ISLNHPIVAAKQSTVIDHISGGRYALNIVTGWNQPEIDMFGSPMMGHADRYACAEEWL
                     AIVKRMWTEDDAFDHEGKFYKIAKGYLQPKPIQAPHPAVMNAGASERGRHFATKYADL
                     VFTVIRAGSLDECQAHVQAYHKLAREEYGREVRVWTLANIVQGETERVARDLYRYYVH
                     QKGDWQAAKNMIDTFSLEINARVIPPERLKAYQEAFIAGWGGFPLIGTKEQIVDGLQA
                     LSRAGLDGVLLCWPRFEQGMREFRDVTYPLVEQAGL"
BASE COUNT          469 a          976 c          914 g          507 t
ORIGIN      
        1 catcgccatc gccttgaccg cgccgttcac cggcaccatc gccgacgtgc tcggaagaaa
       61 gcgtgtcatc accgcggcga tgcttgccgt ggtcgtgccc atggcgggcg cggcgctcgc
      121 ccaggacgtg caggtgctca tcgcctggcg ctttgttcag ggcttgctgc tgccgccggt
      181 cttcgccgtg accatcgcct atatcggcga cgaatggccg ccggcgcagg tggcgggggt
      241 cgccggcgtc tacatcgcgg gatcgagcat cggcggcttc tgcggccgct tcatccccgg
      301 cgtgctcggc gatctcgtcg gctggcgcgg cgccttcctg gcactcgcgg gattgtcgtt
      361 catgggcgcc atcttggtcg cgctgatgct gccgcgggaa aaggggttcg tgcgctcgga
      421 cggccttcgc gcctcggcgc ggcagatgct gcggcatttg aaaaacccgc agctgcttgc
      481 gacctacgcg atcggcttcg gcgtgctctt caacttcatc gcggtcttca cctatgtgag
      541 cttccacctc gccgcgccgc cctatctctt ttcctcgacg ctgctcggcg cgattttcgt
      601 gacctacctc gtcggcaccg tggtctcgcc gatgacgggc tgggcgatcg ccaggctcgg
      661 acgccggcgt ttcatcctgg cggtcattgc cgcctgggcg tgcggcgctg tgctgttgct
      721 cgcaccgccg gtttccgcga tcatcgcggg gctcgtcctc tgcgccgcct gcggcatgct
      781 gtgccagacc atctcgaccg gctacgtcac cgcgatcgca aaggacggac gctcatcggc
      841 tgtcggcctc tacgtcacat cgttctatat cggcggcagc atgggcgcct tcctgcccgg
      901 cctcgcctgg aattccggcg gatggccggc ctgcatcgcc atggtgattg ccatgcttgc
      961 cggcatggcg ttgattgcga cgctcgccta tggccgcgtg acggcttaat attcaagcac
     1021 gatatcagtc ggggggaacg aatgacgacg ccgacccaaa gccagctcga ttttctgcaa
     1081 tcgatcgaca cgcccacggt gtgcaacctg atcgagatcg tcgcgcccga gcgccgcggc
     1141 ttcggctaca ccgtcaagca cctgcattgc ccgtttccgg agctgccgcc catcgtcggc
     1201 ttcgccaaga cggtgacgtt caaggccaag gacgcggtgc cgctcggcga cggcggctac
     1261 atgcagaagc ggctcgatta cctcgactac gtcgccggct cgccgcggcc cagcatcatg
     1321 gtgatggagg acctcgacgg cgagcacgtc ggctatggcg cgttctgggg cgaggtgcag
     1381 tcgaacgtgc acaaagcgct gggcgcgctc ggcgtcgtca ccaatggctc gatccgcgac
     1441 atcccgatga tcgcgccggg cttccagatg ctggcgggct cgatcgtgcc gtcgcacgcc
     1501 tatgtccacg tcgtcgatta cggcatcgac gtgaacgtcg tcggcatggc ggtcaagagc
     1561 ggcgacctca tccacgccga ccgtcacggc gccatcgtgg tgcctaccga caagatcgac
     1621 gccatgaaaa cggcgctcga gggactttcg gcccgcgaag ccaagatcat cgcggcggcc
     1681 aaggccggcg gcgacgtcgc ggccatcaag gcggcgatga agggctagat tcgtgaccac
     1741 gcctaccagc cggcgaatgg atcggcgcga taccaatccg gctttcagca cccgcaggct
     1801 gaagctcggg accttccaga ccaacctcga cagcggctgc gtgatgtcgg acctcgacgg
     1861 ccggctcgac atcacctggc ccaataccgt cgcgctcgcc cggctcgccg aggagatgga
     1921 gttcgaggcg ctggtgccgg tcgctcgctg gcaaggcttc ggcggcgcca ccaatccgca
     1981 aggccccggc ttcgaggcct atacctgggc ggcaggcatc gccgcctcga ccgcgacgcc
     2041 cggcgtgttc gccacctcgc acatttccct gaaccatccc atcgtcgccg ccaagcagtc
     2101 cacggtgatc gaccatattt ccggcggccg ctacgcgctc aacatcgtga ccggatggaa
     2161 ccagccggaa atcgacatgt tcggcagccc gatgatggga cacgccgacc gctacgcctg
     2221 cgccgaggag tggctcgcca tcgtcaagcg gatgtggacc gaggacgacg cattcgacca
     2281 cgagggcaag ttctacaaaa tcgccaaagg ttacctgcaa ccgaaaccga tccaggcgcc
     2341 ccatcccgcg gtcatgaacg ccggggcttc cgagcgcggc cgccacttcg cgacgaaata
     2401 cgccgacctg gtctttacgg tcatccgagc cggcagcctc gacgaatgcc aggcgcacgt
     2461 gcaggcctac cacaagctcg cgcgcgaaga atacggccgc gaggtccggg tctggacgct
     2521 cgccaatatc gtgcagggcg agaccgaaag agtggcgcgc gacctctatc ggtattacgt
     2581 ccaccagaag ggcgactggc aagccgccaa gaacatgatc gacacgttct cgctcgagat
     2641 caatgcgcgg gtcattccgc cggaacgcct gaaagcgtat caggaggcct tcatcgccgg
     2701 ctggggcggc tttccgctga tcggcacgaa agagcagatc gtcgacggat tgcaggcctt
     2761 gtcgcgcgcc ggcctcgacg gcgttctgct gtgctggccg cgcttcgagc agggcatgcg
     2821 cgaattccgc gacgtgacct atccgctggt cgagcaggcg gggctg
//
LOCUS       DASWGA010000900        17656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1756077, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000900 DASWGA010000000
VERSION     DASWGA010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 17656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17656
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1756077"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VF991_20740"
     CDS             complement(<1..303)
                     /locus_tag="VF991_20740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558934.1"
                     /translation="MVDRRQVLVGAAGAAGMLAAEAVAQTSPAPAATPPESPYAITYI
                     EVEPARADASRRLLARYQEALKDKAAVEFAVFEQIGRPNHFAIVEQWPSAKAREDNA"
     gene            complement(309..695)
                     /locus_tag="VF991_20745"
     CDS             complement(309..695)
                     /locus_tag="VF991_20745"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9558935.1"
                     /translation="MPVVKNEEAQEIPWRPGYRNYVLAGQAQGVSVSSSMGVLEQGAG
                     APLHFHEDVDEVIVVVEGTLDVRIGDERLLVGKNQTISIPARTPHAFTVVSPEGARFI
                     AFLPKQGAHMATKYLEGGPPLGANLK"
     gene            835..1119
                     /locus_tag="VF991_20750"
     CDS             835..1119
                     /locus_tag="VF991_20750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HEX9558936.1"
                     /translation="MCRNNRNLYNFKPPATEEEIRASSLQFVRKLSGFNRPSKANEEA
                     FDRAVEAVAHVARELISSLVTTAPPRDREVEAEKARARAAVRFARPAGAG"
     gene            1203..2516
                     /locus_tag="VF991_20755"
     CDS             1203..2516
                     /locus_tag="VF991_20755"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX9558937.1"
                     /translation="MAVDIGLDVAKAVEPDRVHRSVYSEPAIFELEMERIFNKVWTYV
                     GHESQVPAVGDYWTVQIGRQPMIMVRHSDRSVRVLYNRCPHRGTMLYGNRCGNVGKGI
                     ICSYHSWQFDTDGRCKAIPLDKGYQGTRLTPGDASCNVKTAARVGSYRGFVFASLADD
                     GPSLVEWLGPAKIAFDDMCDRAPEGEVEVVPTCFRVIQQSNWKIFLENQLDALHPAVT
                     HESTGRAAGEVEEAIQKKGGSAPLSYHFLSAFATPISKWDAFQTIGYRHGHCILTGYM
                     GLRPRDPDTVAYEKVMEKAYGKKRMEEILGVNIHHVLLYPGLSVQSPLQQLRAVRPLG
                     VDKTLTEIWHFRLKGAPEAIYRRALGYYNLVNSPSTMVNADDLWNFWKSHKGLESQGG
                     DWVSFHRNAGQDLETNDVTTSVIGTSEQPMRNQFKAWTQYMNGAN"
     gene            2516..3112
                     /locus_tag="VF991_20760"
     CDS             2516..3112
                     /locus_tag="VF991_20760"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic-ring-hydroxylating dioxygenase subunit
                     beta"
                     /protein_id="HEX9558938.1"
                     /translation="MAKKTKPNAKSVARKSAAKKSTAAATRAAARGTKPSGPNGRDTL
                     REVEQLLYRQAECLDGKRWQEFIELFTEDGTYWMPAAPEQTTGEGVPSIFWEDRNLMT
                     VRAKRLAHPRAWSQKTAWGTNHVIGNVTVEKEDANGDLVVRSRFHMMEFRNDTTRHFA
                     GSYIHHLKKTKGGHRIKLQRVDMVNAEGPYEYVLQAWV"
     gene            3296..4335
                     /locus_tag="VF991_20765"
                     /pseudo
     CDS             3296..4335
                     /locus_tag="VF991_20765"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            4438..5355
                     /locus_tag="VF991_20770"
     CDS             4438..5355
                     /locus_tag="VF991_20770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9558939.1"
                     /translation="MPLSLIAEQLLNGLQLGLMLFLLAAGLTLVFGIMDMINLAHGSL
                     YMIGAYIAAAVVEASGSFLLGIAGAIAGTALVGAALEMTLLRRLYRRSHLSQVLATFA
                     LILIANEIVRMIWGSQPILLNMPPALSGPAELSGFRYPAYRLVVIGVGLAMALFLWLL
                     VTRTRAGMWVRAGASDREMAEVMGVDTRTLFTLVFAIGAALCAVAGALLGPLLAVQVG
                     MGENILILAFVVISIGGIGSIRGALIGSLLVGLVDTAGRAFLPLLFRKLFPAAVASEA
                     GPAVASVLIYMLMAAVLYFRPSGLFPARG"
     gene            5355..6317
                     /locus_tag="VF991_20775"
     CDS             5355..6317
                     /locus_tag="VF991_20775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9558940.1"
                     /translation="MRDTLRIPLRPWPTLAAVAALVLLPLVALAVGQPFYLVFATRVL
                     IYALIATSLNLLIGYGGMVSFGHAAFVGAGAYTVAVLMPAGMVSAWLLWPASLLGGAL
                     LAFLIGALSLRTRGVGFIMITLAFAQMAYYLVLSLRVLGSDDGLTLGVRPSLGFLDLN
                     SDFAFYYVALTILLATLAAMRALLNAPLGRALQGIRDNETRMEAIGFPTYRLKLLVFV
                     IAGAAAGLGGGLLASLNGLVGPNLLHWTESGLLMIMVILGGAGRLLGGVLGAAVLLGA
                     EEAIAEHTIHWPLGIGVVLLAVVFFAPEGLSGLARRRRADRAGT"
     gene            6314..7060
                     /locus_tag="VF991_20780"
     CDS             6314..7060
                     /locus_tag="VF991_20780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558941.1"
                     /translation="MTAPVLRVTAMRRRFGGVLAVDDVSLDLAEGELHAVIGPNGAGK
                     TTLIHLLSGALRPSAGTIVLDGRDITGLAMHRRVRLGLARSYQITSLFPNFTVLENLA
                     LALQGTGQGRGGPDDRDRARAELDAVGLGNRADQLAGALAHGERRQLELGLALATGAR
                     ILLLDEPMAGMGPEEAARITSLIESLKRRRTILLVEHDMEAVFRLADRISTLVYGRLI
                     ASGAPDEIRRHPEVRRAYLGEAYLGEEGPA"
     gene            7057..7764
                     /locus_tag="VF991_20785"
     CDS             7057..7764
                     /locus_tag="VF991_20785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558942.1"
                     /translation="MTPLLEVEGVQAGYDTLPVLFGVDLLIKPGEAVTLLGRNGMGKT
                     TTVRCIVGLSRPTSGTIRFEGRRIDGWTADRIGRAGIALVPEGRRIFPNLSVRENLIA
                     FAANRGAVPPWTLERVYALFPRLAERAGNMGLELSGGEQQMLAIGRALMTNPKLLILD
                     EATEGLAPLLREEIWRVLAELSRSGLAILAIDKYVDRLVKLCERHTILERGRVAWAGA
                     SAELAADRGLWERYLGV"
     gene            complement(7819..9087)
                     /locus_tag="VF991_20790"
     CDS             complement(7819..9087)
                     /locus_tag="VF991_20790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558943.1"
                     /translation="MTAATIPIWIAVIAMTCTVACQSSRSDPIGNRIGNPGAVNERSI
                     GFDDIAPAGFTLKQCWNALGMDSQQRIYIGFTSRRADAREDFVVFRYDLSTGERRFLG
                     TFMDASQAAGNLQPAEEIPKGHTRMLEIDGKMVMGSQGFHDLKAAIDTLPNYRGSHLY
                     AYDLSRGNLQDISRPLPGGVVTEHQGLIALSHAPGSDLLVGLAHPSSDIVLFDHKHGR
                     VQQIVPGIPWRLGNPLSREVVVTRKGKIYTYRGTEDPAQRQEVHRIWVYDWKSKASSE
                     TSYTATGGFWNGQTSTRDGETIYLATVNGELYKLDVETEVFTHLGHFLPRQEYAAGVR
                     VNSLYGISLSADEKRIYGIPRRSRSGGSNLYSYEIATGAVTLVGALEPAIYTGSQMRD
                     SRGNIYFARFGDGQSSEGKVRLVIVHPSSP"
     gene            complement(9267..9620)
                     /locus_tag="VF991_20795"
     CDS             complement(9267..9620)
                     /locus_tag="VF991_20795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HEX9558944.1"
                     /translation="MSYIDGFVAAVPTANRDAYKQHAQKAAPIFKEHGALKMVECWGD
                     DVPDGKLTSFPMAVQKKDDETVVFSWIVWPSKQARDEGMKKVMADPRIQPDVNPMPFD
                     GKRLIFGGFEVLVEA"
     gene            complement(9705..10397)
                     /locus_tag="VF991_20800"
     CDS             complement(9705..10397)
                     /locus_tag="VF991_20800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558945.1"
                     /translation="MPTLWEDRIRNRNPRQLTVFVAPRLNKPWRRAFDDALKTFNQLS
                     QSNQLGVTMVESTTKPDPDGAGGADVQFDMGKGDLTYTALGATTVVKGYSGTSMHGNT
                     QLVSMQFGNQPKRIQRAFVFVPETPMVNALMQVGRGKFDQVQREAGHGIKHFIAAHEL
                     IHVCGLLNSDHTHLGANADLFVEQPQPDSGPFSKPDEDRILLHLTSPKNVVSPPIFLK
                     KATADLIKNNWS"
     gene            complement(10515..11918)
                     /locus_tag="VF991_20805"
     CDS             complement(10515..11918)
                     /locus_tag="VF991_20805"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9558946.1"
                     /translation="MIPYADYTPLTFHDAARRFTDGNDSPRAYLERCLETIAEREPVV
                     KALTALNETGARAAADASAARWKAGRPMSPIDGMPVGIKDLLETRDMPTEMGCAAMKG
                     NFPKRDNAGVWALRQAGAVILAKTVTAELGGSQPGPTTNPFDPRRTPGGSSSGSAAAV
                     GANMMPAAIGTQVGGSIIRPAAYCGNFALKPTQGGINRGERLATSQSTHGPHAGCLED
                     MWQVAIEIAKRCGGDRGAIGLMGPDTLPAAIKPNRLIVLQTEGWADLDPASKAGFAQL
                     LSRLEAAGVTLIHRTDHPFVEALEKAIANGRAICNGVTSWENRWYQRGMLDAAPDGIS
                     GGISARGQATLKRAEAMTPDDYRASLLARQQAQLAHAAVAQLADAAITLSCPGPAPLW
                     SGDVPGQPLAPRPTGDFVFNAPSSMLFAPVVTVPLISVGGLPVGVQLMGQQHEDARIT
                     GLARWFSENLQRVAASA"
     gene            12097..12459
                     /locus_tag="VF991_20810"
     CDS             12097..12459
                     /locus_tag="VF991_20810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558947.1"
                     /translation="MALLPPMYTTNADRRRTQAAKPKSKSLLKAEAKHAKFLKRMGVG
                     DLGRKITVPAPAPAYARPSPDIPSMNTLSGTTAKPEPKVYSGKRQLLGVATMHKSNMV
                     PVFADKPEEATEIAKMRR"
     gene            complement(12482..12922)
                     /locus_tag="VF991_20815"
     CDS             complement(12482..12922)
                     /locus_tag="VF991_20815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX9558948.1"
                     /translation="MKIEGGCHCGSIRFEAEVDPATVVICHCTDCQTFSGSAFRTVVL
                     TTPGTFVLLAGAPTVYVKTAESGNRRQQTFCPTCGTPIYSAPVSGDTTVVVLRVGAIR
                     QRDQLVPRDQYWFRSSQAWLPNLSTIMKQDKQPVFDETRRRRDS"
     gene            13230..14000
                     /locus_tag="VF991_20820"
     CDS             13230..14000
                     /locus_tag="VF991_20820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558949.1"
                     /translation="MVDSSYLYICVIAFVAMFGGALIGLFTARALPDHHLSSESATVV
                     KLSAAVVVSLTSLVLALMLSSANSSFSVNAGIVKKLSSDLIHLDHMLRTYGPEANEAR
                     ANLRAYATKKNEELFPVSDVPSTSNRETSDLLDALLDAILSLSPSDRRHTVLISQALT
                     VTDNIYNERWLLWENPGTTVPVQFLFVLIFWLFLIFVSFGLFAPVNLMVVTSFFLSSL
                     AVTGAILMLLELGDPMHHSWLQVSSEPMRRALLEIGRP"
     gene            complement(14036..14782)
                     /locus_tag="VF991_20825"
     CDS             complement(14036..14782)
                     /locus_tag="VF991_20825"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9558950.1"
                     /translation="MAKAKKAALVTGGGRNIGRACVLGLAEDGFDVAINGSSDRAACE
                     KVAKEAEKLGARTLVVMGDVGKSEECKRIAEEVIKQFGAVDVLINNAALRPNKPFLEM
                     SEADWRRVISVDLDAAVWLSRACLPGMLNKGWGRIVNFTGMNAIHGHAGRTPVSVAKH
                     GVWGLTKALAVEFGPRNITANAISPGPIAPDVEETNASAQARQQTLARVPLGRMGRPV
                     EVAAAARLLVSDAGAYINGQMIQVNGGAET"
     gene            complement(14782..15963)
                     /locus_tag="VF991_20830"
     CDS             complement(14782..15963)
                     /locus_tag="VF991_20830"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007612609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9558951.1"
                     /translation="MTTLPLSHISVLDLTAHRAGPTAVRQLADWGAHVIKIEPPSEGK
                     TDAMGGHRHGFDFQNLHRNKKAMTLNLKSPQGHAIFMKLAEKADVIVENYRSDVKHRL
                     KVDYDTVAKINPRIVYGSIAGFGQSGPDAARPGVDQIAQGMGGLMSITGEPGRGPMRV
                     GIPIADLTSGLLLAQAIILALYNRERTGKGQWVHTSLLEAQIFMLDFQAARWLIKGEV
                     PKQAGNDHPTGIPTGVFPTSDGHINIAASGENLWKRCAKALGAPELLDHPEHATPSLR
                     SQHRKAVNERIAAVTRTNTSAHWMEALNKAGVPCGPINTIDQTFAEPQVKYLGIARAV
                     KHPKLGDIKVVGQPINLSDAPQPKELRPTPELGEHTDEVLASLGYDGKAIAALKAGGV
                     I"
     gene            complement(16057..16845)
                     /locus_tag="VF991_20835"
     CDS             complement(16057..16845)
                     /locus_tag="VF991_20835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX9558952.1"
                     /translation="MEEQKIYGRRDGAVGHLVFNNPAKLNAVSLDMWDAFVGILKDYE
                     RDPEIRCVVVSGAGGKAFVSGADISKFESERANADAQVRYDAISRQGYEALYDFAKPT
                     IAKITGYCIGGGMNLAACCDMRYCNEGARFGVPAAKLGLGYGFQRIERLSRIVGLPRA
                     MEFLFTAKQYSSQEAYDMGLVNGVAADAELDALVGQITAAIAQNAPLTIALAKAAARE
                     IAKPESKQDHKRLEKMTQACFDSDDYKEGRRAFMEKRKPAFKGR"
     gene            16925..>17656
                     /locus_tag="VF991_20840"
     CDS             16925..>17656
                     /locus_tag="VF991_20840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9558953.1"
                     /translation="MASVELKGLSKHYGNAVAVDGVSLRVEHGQLVCLLGPSGCGKTT
                     TLRLIAGFIEPSAGEIVVGGKVLSSPSRTVPPEGRNMSMIFQSYALWPHMTVAENVAY
                     GLKIRKLDRATIEAKLKAILSTAHLEALADRYPGELSGGQQQRVSLARALVVEPETLL
                     LDEPLSNLDANLREEMRFEIRRLHDRYRYTTIYVTHDQAEAMTTADLIAVMNHGKVEQ
                     LGPPEEIYNRPRSEFVARFIGGANIL"
BASE COUNT         2844 a         5754 c         5846 g         3212 t
ORIGIN      
        1 ggcgttgtcc tcgcgcgcct tggcgctcgg ccactgctcg acgatggcga agtggttggg
       61 tcggccgatc tgctcgaaca cggcgaactc gaccgcagcc ttatccttga gcgcctcttg
      121 gtagcgcgcc agcaggcggc gcgaggcatc ggcccgggcc ggctcgactt cgatgtaggt
      181 gatcgcgtac ggcgactctg gcggtgttgc cgccggggcc ggcgacgttt gcgccacggc
      241 ctcggccgcc agcatgcccg cagcaccggc tgcacccaca aggacctgac gacggtcgac
      301 catacgtcct acttcagatt ggcgcccaaa ggcggcccgc cctcgagata ctttgtcgcc
      361 atgtgcgctc cctgcttggg aagaaaagcg atgaagcgcg ccccttcagg gctgaccacg
      421 gtgaaggcgt gcggcgtgcg agcgggaatg gagatggtct ggttcttgcc aacgaggagg
      481 cgctcgtcgc caatccgcac gtcgagcgtt ccttcgacga cgacaatcac ctcatcgacg
      541 tcctcgtgga aatgcaacgg tgcgccggcc ccttgttcca ggacgcccat gcttgaactt
      601 acggaaacgc cctgcgcctg gccggcaaga acatagttac gatagcccgg gcgccagggg
      661 atctcctggg cttcctcgtt cttcaccacc ggcatgtcga cctcctgtaa tgcagtgcgt
      721 ggcgacgtcg cactctagtc cgtccgatcc ccggtccgcc actggcgttc cggcttgatg
      781 cggtccccag ccgcgtgcca gcatgatccg aatactttgc gcgagaggtg tcttatgtgc
      841 cgcaacaacc ggaacctcta caacttcaag ccgcctgcaa cggaggagga gatccgcgcg
      901 tcgtcgctgc agttcgtccg caagctgagc ggcttcaacc ggccgtccaa ggccaacgag
      961 gaggccttcg accgcgccgt ggaagcggtg gcccacgtgg cgcgtgagct gatcagctcg
     1021 ctggtcacga ccgcgccgcc gcgcgaccgc gaggtcgagg ccgagaaggc gcgcgcccgc
     1081 gcggcggtgc gcttcgcccg tccggcaggg gctgggtgat gagttcctct ccccccgtta
     1141 gggggagagg agcgtgattg gcgatgtgcc cacactgtag atgggcttag agggagatcc
     1201 cgatggcagt cgatatcggc ctggatgtcg ccaaggcggt ggagcccgat cgcgttcatc
     1261 gcagcgtcta ttccgagcct gcgattttcg agctcgagat ggagcgcatc ttcaacaagg
     1321 tgtggaccta tgtcgggcac gagagccagg tgccggcggt cggcgactac tggacggtgc
     1381 agatcggccg ccagccgatg atcatggtcc gccattccga ccgctcggtg cgcgtgctct
     1441 acaaccgctg cccgcatcgc ggcaccatgc tctacggcaa ccgctgcggc aatgtcggca
     1501 agggcatcat ctgctcctac cattcctggc agttcgacac cgatggccgc tgcaaggcga
     1561 tcccgctcga caagggctat caaggcacgc ggctcacgcc gggcgacgcc agctgcaacg
     1621 tcaagacggc ggcgcgcgtc gggtcttatc gcggcttcgt gtttgcgagc ctcgcggacg
     1681 acgggccgtc gctggtggag tggctcgggc cggccaagat cgctttcgac gacatgtgcg
     1741 accgcgcgcc ggagggcgag gtcgaggtgg tgccgacctg cttccgcgtg atccagcaat
     1801 cgaactggaa gatcttcctg gagaaccagc tcgacgcact gcacccggcg gtgacgcacg
     1861 aatcgaccgg tcgcgcggcc ggcgaggtcg aggaggcgat ccagaagaaa ggcggcagcg
     1921 cgccgctcag ctatcacttc ctctccgcct tcgcgacgcc gatcagcaaa tgggatgcgt
     1981 tccagaccat cggctatcgc cacggccatt gcatcctcac cggctacatg gggctgcggc
     2041 cgcgcgaccc cgacacggtg gcctacgaga aggtgatgga gaaggcctat ggcaagaagc
     2101 gcatggagga gatcctcggc gtcaatatcc accatgtgct gctctatccc ggcctctcgg
     2161 tgcagtcgcc gctgcagcag ctgcgcgccg tgcggccgct cggtgtcgac aagacgctga
     2221 ccgagatctg gcattttcgt ctaaaaggcg cgcccgaggc gatctaccgc cgcgcgctcg
     2281 gctactacaa cctcgtcaac tcgccgtcga cgatggtcaa tgccgacgac ctgtggaact
     2341 tctggaagtc ccacaaaggc ctcgaatcgc agggcggcga ctgggtgagc ttccaccgca
     2401 acgccgggca agacctcgag accaacgacg tgacgacctc ggtcatcggc acctccgagc
     2461 agccgatgcg caaccagttc aaggcctgga cccagtacat gaacggggcg aactgatggc
     2521 gaagaagacc aagccgaacg ccaagagcgt ggccaggaag agcgcggcca agaagagcac
     2581 ggcggcggcg acgagagccg ctgccagagg gacgaaacca agcgggccga atggtcgcga
     2641 tacgctgcgt gaggtcgagc agctcctcta ccgccaggcc gaatgcctcg acggcaagcg
     2701 ctggcaggag ttcatcgagc tgttcaccga ggacggcacc tactggatgc cggcggcccc
     2761 cgagcagacc accggcgagg gcgtgccgtc gatcttctgg gaagaccgca acctgatgac
     2821 cgtgcgggcg aaacggctcg cccacccgcg cgcctggtcg cagaagacgg cgtggggcac
     2881 caatcacgtc atcggcaacg tgaccgtcga gaaggaggac gcaaacggcg atctcgtcgt
     2941 ccgctcgcgc ttccacatga tggagttccg caacgacaca acccgccatt tcgccggctc
     3001 ctacattcat cacctgaaga agacgaaggg gggccatcgc atcaagctcc agcgcgtcga
     3061 catggtgaac gctgaggggc cgtacgaata cgtactgcag gcgtgggtgt gatatcattg
     3121 ccgagagcgc agcgatgacg aacgagggga ggccgtcatg aggagactga tatcggcgct
     3181 gctgctaggg gcggtggcgg ctctgccggc agctctaccg gcctgggcgg ccgacaaggt
     3241 caaggtcggg tttctgagca cattgtcggg ccccggcggc gcgctcggcg tcgacatgcg
     3301 cgacggcttc ctgctggcgg tgaagctggg cggcggcaag ctcggcggcc tgcccgccga
     3361 agtcgacgtg gtcgacgacc aacagaagcc ggatgtcgcc cgccaggcgg tcgagcgctt
     3421 caccaagcgc gaccatgtcg acctcatcac cggcatggtg ttctcgaacg tgctgttgcc
     3481 ggtcatgccg gcgatcctcg agagcggcac gatctatctc agcaccaaca ccggccccga
     3541 agactatgcg ggcgagaagt gcaacccgaa cttcttcgcc gtggcctggc agaacgagga
     3601 catccccggc gccatgggcg aggtgatgaa ccagaggggc ttgaagaacg tctacctgat
     3661 cgcgcccaac tatccgggcg ggcgcgagac gctcgctggc ttcaagcgat tctacaaggg
     3721 caagatcgcc gacgaagtct acgtcaagct cggccagctc gactacgcgg cggagatcgc
     3781 caacatgcgc gccgccagcc cgacgccgtg ttcttcttcc tgccgggcgg catgggcatc
     3841 aacttcgtca agcagtacgt cgccgccggt gccgacaagg acgccaagct ctacacgccc
     3901 ggcttctcgg ccgacgagga cacgatcaag gcggtcggcg agccgatgat cggcatcctc
     3961 aacacctcgc agtgggccgc cgacctcgac aacgcggcca acaagaagtt cgtccaggag
     4021 ttccagaagg aatacggccg catgccgacc atgtacgcct cgcaggccta cgacgtggcg
     4081 ctgctggtcg acgccgcgct caagcagatc ggcggcaagg tcgaggacaa ggacgcgctg
     4141 cgcaaggcgc tcagcgcggc gaagttcgac gccacgcgtg gcaagttccg cttcaacaag
     4201 aacaactttc cgatccagga ctactacctg cgcgaggtct accgggatgc gagcggtcgc
     4261 atcaccaaca agacggtcgg caaggtgttc agcgatttcc aggacgtcca cgccgccaag
     4321 tgcaagatga agtagtgtct ttgctgggag cgcgccactc cgtggcgctc atgtggcgtc
     4381 caagacaaca aagacgcgcc atcggagtgg cgcgctccca gcaatgagag gaacaggttg
     4441 cctctctccc tgatcgccga gcagctgctg aacgggctgc agctcgggtt gatgctgttc
     4501 ctgctggccg ccgggctgac gctcgtcttc ggcatcatgg acatgatcaa cctggcgcac
     4561 ggctcgctct acatgatcgg cgcctacatc gccgcggcgg tggtcgaggc gtcgggctcg
     4621 ttccttctcg ggatcgcggg cgccatcgcc ggcacggcgt tggtcggcgc ggcgctcgaa
     4681 atgaccctgc tgcgccggct ctatcggcgc tcgcacctgt cgcaggtcct ggcgaccttc
     4741 gccctgatcc tgatcgccaa cgagatcgtg cgcatgatct ggggcagcca gccgatcctg
     4801 ctcaacatgc cgccggcgct gtcgggcccg gccgagcttt caggctttcg ctatcccgcc
     4861 tatcgcctgg tggtgatcgg cgtcggcctg gcgatggccc tcttcctctg gctgctggtg
     4921 acgcggacgc gcgccggcat gtgggtgcgc gccggtgctt cggaccgcga gatggcggag
     4981 gtcatgggcg tcgacacgcg cacgttgttc acgctcgtct tcgcgatcgg ggcggcgctc
     5041 tgcgcggtgg cgggcgcgct gctcgggccc ttgctcgccg ttcaggtcgg catgggcgag
     5101 aacatcctca tcctcgcctt cgtcgtcatc agcatcggcg gcatcggctc gatccgcggc
     5161 gcgctcatcg ggtctctgct ggtcggactg gtcgacaccg ccggccgcgc cttcctgccg
     5221 ttgctgttcc gcaagctgtt tcccgcggcg gtcgcgtcgg aggcgggccc ggccgtggcc
     5281 tcggtgctga tctatatgct gatggcggcg gtgctctatt tccgaccctc cggcctgttc
     5341 ccggcgcgcg gctgatgcgg gacacgctta gaatcccgct gcgaccttgg ccgacgctcg
     5401 ccgctgtcgc ggcgctagtg ctgctgccgc tcgtcgccct ggcggtcggc cagccgttct
     5461 acctggtgtt cgcaacgcgc gtgctgatct acgccctgat cgccaccagc ctcaatctgc
     5521 tgatcggcta tggcggcatg gtgagcttcg gccacgccgc cttcgtcggc gccggcgcct
     5581 acacggtcgc ggtgctgatg ccggcgggga tggtctcggc ctggctgctg tggccggcgt
     5641 cgctgctcgg cggcgcgctc ctggcgttcc tgatcggcgc gctgagcctg cgcacgcgcg
     5701 gtgtgggctt catcatgatc acgctggcct ttgcccagat ggcctactac ctcgtgctgt
     5761 cgctgcgcgt tctgggcagc gacgacgggc tgacgctcgg cgtccggccg tcgcttggct
     5821 ttctcgatct caacagcgac tttgcgttct actacgtcgc tctgacgatc ctgctggcga
     5881 cgctggcggc aatgcgcgcc ttgctcaacg cgccgctcgg ccgggcgctg cagggcattc
     5941 gcgacaacga gacgcgcatg gaggcgatcg gctttcccac ctaccgcctc aagctgctcg
     6001 tcttcgtcat cgccggcgct gcggccggcc tgggcggcgg gcttttggcc agtctcaacg
     6061 ggctggtcgg gcccaacctg ctgcattgga ccgagtcggg actgctgatg atcatggtga
     6121 tcctgggcgg cgccggccgg ctgctgggcg gtgtcctggg cgccgccgtg ctgctcggcg
     6181 ccgaagaggc gatcgccgag cacacgatcc actggccgct cggcatcggc gtggtgctgc
     6241 tcgccgtggt gttcttcgcg ccagagggcc tctctggcct ggctcgccga cggcgcgccg
     6301 atcgggccgg gacatgaccg cgcctgtttt gcgcgtcacc gccatgcgga ggcgcttcgg
     6361 cggcgtgctg gcggtcgacg acgtcagcct ggacctcgcc gagggcgagc tgcacgcggt
     6421 catcggcccg aacggcgccg gcaaaacgac gctgatccat ctcctgtcgg gcgcgctcag
     6481 gcccagcgcc ggcacgatcg tgctcgacgg ccgtgacatc actggcctcg ccatgcaccg
     6541 gcgcgtccgg ctcgggctgg cgcgctccta ccagatcacc agcctgtttc cgaacttcac
     6601 ggtgctggaa aacctggcgc tcgctctcca agggacgggc caaggaaggg gcggcccgga
     6661 tgaccgggat cgcgcccgcg ccgagctcga cgccgttggg ctcggcaacc gcgccgatca
     6721 gctcgccggc gcgctggcgc atggcgagcg ccggcagctt gagctcggcc ttgcgctggc
     6781 gaccggcgcg cggatcctgc tgctcgacga gccgatggcg gggatgggac ccgaggaggc
     6841 ggcgcgcatc acgagcctca tcgaatcgct caaacgccgg cggactattc tgctggtcga
     6901 gcacgacatg gaggccgtgt tccgcctcgc cgaccggatc tcgaccctgg tctatggccg
     6961 cctcatcgcc agcggcgcgc ccgatgagat tcgtcgccat ccggaggtgc ggcgtgccta
     7021 tttgggtgag gcctatttgg gcgaggaggg gcccgcatga ccccgttgct cgaagtcgag
     7081 ggcgtgcagg ccggctacga caccctcccc gtcctgttcg gcgtcgacct tttaatcaag
     7141 ccgggcgagg cggtgacgct gcttggccgc aacggcatgg gcaagaccac gaccgtgcgc
     7201 tgcatcgtcg ggctgtcgag gccgacctcc ggcacgatcc gcttcgaggg ccggcgcatc
     7261 gacgggtgga cggcggaccg catcggccgc gccggcatcg cgctcgttcc cgaaggccgg
     7321 cggatcttcc ccaatctcag cgtgcgcgaa aacctgattg ccttcgccgc caaccgcggt
     7381 gccgtcccgc cgtggacgct cgagcgcgtc tacgccctgt ttccacgtct tgccgagcgc
     7441 gccggcaaca tgggcttgga actctccggc ggcgagcagc agatgctggc catcggccgc
     7501 gccctgatga ccaaccccaa gctcctcatc ctcgacgagg cgacggaagg cctggcgccg
     7561 ctcttgcgcg aagagatctg gcgcgtgctc gccgagctca gccgcagcgg tctcgccatt
     7621 ctggcgatcg acaagtatgt cgaccggctg gtgaagctct gcgagcgcca caccatcctg
     7681 gagcgcgggc gggtcgcctg ggccggcgcc tcggccgagc tcgccgccga ccgcggcttg
     7741 tgggagcgct atctcggcgt ctagagaggg ccaagcacgc cttgtgaaac ggcgccgaat
     7801 cgccatgtgc gtggcgcgtc agggtgagga gggatgcacg atgacgagac gcactttacc
     7861 ttccgaggac tggccgtcgc cgaacctggc aaagtagata ttgccccgcg aatcacgcat
     7921 ctggctgccg gtgtagatgg ctggctccaa tgcgcccacc aaagtaaccg cgcccgtggc
     7981 aatctcatag gaatacaaat tcgacccgcc ggaacggctg cggcggggaa tgccgtagat
     8041 ccgcttctcg tcggcggaca ggctaatccc atacaaggaa ttcacccgca ccccggccgc
     8101 gtactcttgc cgtggcagga agtgaccgag atgcgtgaag acctccgtct cgacatccag
     8161 cttgtagagc tccccgttga ccgtcgcgag atagatcgtc tcgccgtcgc gagtcgaggt
     8221 ctgcccgttc cagaagcctc cggtcgccgt ataggaggtc tcgctgcttg cttttgactt
     8281 ccagtcatac acccaaatgc ggtgcacctc ttgccgctgt gccgggtctt ccgttccccg
     8341 ataggtatag atcttgccct tccgggtaac gacgacttcg cggctcaacg ggttgcccag
     8401 ccgccacggg atgccgggaa cgatctgttg cacccggccg tgcttgtggt cgaaaagcac
     8461 gatgtcgctc gagggatggg ccaggccgac caggagatcg gaccccggcg cgtgggacag
     8521 cgcgatgagg ccctggtgct ccgtcaccac gccgccggga agtgggcggc tgatgtcttg
     8581 caagttcccg cgggaaagat cgtaggcata cagatgcgat ccccggtagt tggggagcgt
     8641 gtcgatcgcc gccttgagat catgaaagcc ctgcgagccc atgaccatct tgccatcgat
     8701 ctcgagcata cgcgtgtgcc ctttggggat ctcttccgcg ggctgcagat tgccggccgc
     8761 ctgcgaggcg tccatgaaag tgccgaggaa gcgacgctcg ccggtggaca ggtcgtagcg
     8821 gaagaccacg aaatcctccc gcgcgtcggc acgccggctg gtgaagccga tgtagatccg
     8881 ttgctggctg tccatgccca gcgcgttcca gcattgcttc agcgtgaaac ccgcgggggc
     8941 aatgtcgtca aagccaatcg atcgttcgtt gaccgccccc gggttgccga tccggttgcc
     9001 gatcgggtcg ctgcgagacg actgacaggc gacggtgcaa gtcatggcga tcacggcgat
     9061 ccaaatcggt atcgttgctg ccgtcatgat cggttccctc ctgtgccgtc gattgccgcc
     9121 cttcgggcgg ctccgttcgg gacgacggac cctccggcag caggacggta cggccgaagt
     9181 tcaaggtcta gcgctgacgg cgttcgccat ggcgccttgg tcgtgcaggg gccgagcgcc
     9241 gcttgcgctc ccctgccgac cttggttcag gcctcgacca gaacctcgaa gccgccgaag
     9301 atcagccgct tgccgtcgaa aggcatcggg ttgacgtcgg gctgaatacg agggtctgcc
     9361 atcacctttt tcatgccctc gtcgcgggcc tgtttcgacg gccacacgat ccaggaaaag
     9421 acaaccgtct cgtcgtcctt cttctggacg gccatcggga aggacgtaag ctttccgtcc
     9481 gggacgtcgt cgccccagca ttcgaccatt ttcagggcac catgctcctt gaagatcggt
     9541 gcggcctttt gggcatgctg cttataggcg tcgcggttcg cggtcggcac cgccgcgacg
     9601 aatccatcga tgtagctcat ggtcgtcggt ccccttgata gttaaccata tagtaaagtg
     9661 ttggaccagg ccgagcgggc tgtcaagccc gggcctcttc ccggctaact ccagttgttc
     9721 ttgatcaagt cggccgtcgc cttcttcagg aagatcggcg gcgagacgac attcttgggc
     9781 gacgtaaggt gaagcaatat cctgtcctcg tcgggcttgc tgaacggacc ggaatcgggc
     9841 tgcggctgtt cgacgaacaa atcggcgttc gccccgaggt gtgtatggtc cgagttcagc
     9901 aagccgcaaa cgtggatgag ctcgtgagcg gcgatgaaat gcttgatgcc gtgtcccgcc
     9961 tccctctgca cctgatcgaa cttgccgcgg ccaacctgca tcagggcgtt caccatgggg
    10021 gtttcaggca cgaacacgaa agctctctgg atccgcttgg gttgattgcc gaattgcatg
    10081 gatacgagtt gcgtatttcc gtgcatcgac gtgccggaat agcccttgac cacggtcgtc
    10141 gcgccaaggg cggtgtaggt cagatcgcct tttcccatgt cgaactgcac gtcggctccg
    10201 cctgcgccgt ccgggtccgg ctttgtcgtg ctttccacca tcgtcacgcc gagctggttg
    10261 gactgagaca actggttgaa cgtcttgagg gcgtcatcga acgcccggcg ccatggcttg
    10321 ttcaacctgg gcgcgacgaa gaccgtcagt tgccgggggt tgcgattcct gatcctgtct
    10381 tcccagagcg taggcatggg gaatccctcc tgccatggcc cgaaagttgt tctacgatcg
    10441 attggcctcg tcaacttggt tgatcgcaga tgcagtcagt cagacggggc acgtcgattg
    10501 cgctcctggc gagatcaagc cgacgcagcg acccgctgca aattttcgct gaaccagcgc
    10561 gcgaggccgg tgatgcgggc gtcttcgtgc tgctggccca tgagctgcac gccgaccggc
    10621 aggccgccga cgctgatcag cggcaccgtc acgaccggcg cgaacagcat cgaggagggc
    10681 gcgttgaaca cgaagtcgcc ggtcggccgc ggcgccaggg gctggcccgg cacgtcgccc
    10741 gaccagagcg gcgccggacc ggggcaggag agcgtgatcg cggcgtcggc cagttgggcc
    10801 acggccgcgt gcgcaagctg cgcctgctgg cgggcgagca ggctggcgcg atagtcgtcc
    10861 ggcgtcatgg cttcggcgcg cttcagcgtc gcctggccgc gcgcgctgat gccgccgcta
    10921 atgccatctg gcgcggcgtc gagcatgccg cgctggtacc agcggttctc ccagctggtg
    10981 acgccgttgc agatggcgcg gccgttggcg atcgccttct ccagagcctc gacgaacgga
    11041 tggtcggtgc ggtggatcag ggtgacgccg gccgcctcga gccggctcag cagctgggcg
    11101 aagcccgcct tgctcgccgg gtcgaggtcg gcccagcctt cggtttgcag cacgatcagc
    11161 cggttgggtt ttatcgcggc ggggagtgtg tccggcccca tcaggccgat cgcgccgcgg
    11221 tcgccgccgc agcgcttggc gatctcgatc gcgacctgcc acatgtcctc gaggcagccg
    11281 gcgtgcggcc cgtgcgtgct ctggctggtg gcgagccgct cgccgcgatt gatgccgcct
    11341 tgcgtgggtt tcagcgcgaa gttcccgcaa taggcggccg ggcggatgat cgagccgccg
    11401 acctgcgtgc cgatcgcggc cggcatcatg ttggcgccca ccgcggccgc cgagccggag
    11461 gacgagccgc ccggcgtgcg cctgggatcg aacggattgg tggtcggccc cggctgcgag
    11521 ccgccgagct ccgccgtcac cgtcttggcg aggatcaccg cgcccgcctg gcgcaacgcc
    11581 cagacgccgg cattgtcgcg cttggggaag ttgcccttca tcgccgcaca gcccatctcg
    11641 gtgggcatgt cccgggtctc gagcagatcc ttgataccga ccggcatgcc gtcgatcggc
    11701 gacatgggcc ggccggcctt ccagcgcgcg gcgctcgcat cggcggcggc gcgcgcgccg
    11761 gtctcgttga gggccgtgag cgccttcacc accggttcgc gctcggcgat ggtctccagg
    11821 cagcgctcga gataggcgcg cgggctgtcg ttgccatcgg tgaagcggcg ggcggcgtcg
    11881 tggaaggtga gcggcgtgta gtcggcgtaa gggatcattc ggggacccta gcacgaggtg
    11941 atacgccggc ggcagaaccg tcgcggcttt cgtttgcagc gcggtttagt ccgtgacctt
    12001 gcgcggcgcg gtctggatcg tgtcccgggt cggcgacgcc ttgtgaaacg gcgccgaatc
    12061 gccatctaga tgtctgttgc acgagcagga tgaccgatgg ctctgctgcc cccgatgtac
    12121 acgaccaacg ccgacaggcg caggacgcaa gccgccaagc ccaagtccaa atcgttgctg
    12181 aaggcggagg ccaagcacgc caagttcctg aaacgcatgg gcgtgggaga tctggggcgc
    12241 aagatcacgg tgccggcccc ggcgccggca tatgccaggc catcgcccga cattccgtca
    12301 atgaataccc tttcgggaac gaccgcgaag cccgaaccca aggtgtacag cggtaagcgt
    12361 cagctgttgg gcgtagccac catgcacaaa tcgaacatgg tgccggtgtt tgccgataag
    12421 cccgaagagg cgaccgaaat cgccaagatg aggcggtagg cgccgcaatt gtcaggcgcc
    12481 gtcaggagtc gcgtcggcga cgcgtctcgt cgaagaccgg ctgcttgtct tgcttcatta
    12541 tcgtcgacag gttcggcagc caggcctgcg acgagcggaa ccaatattga tcgcgcggga
    12601 cgagctggtc gcgctgacga atggcgccga cacgcagcac gaccaccgtg gtgtccccgc
    12661 tgacgggagc ggagtagatc ggcgtgccgc acgtcgggca gaacgtttgc tggcgtctgt
    12721 tgccgctctc ggccgtcttc acgtagaccg tgggagcgcc ggcaagaagc acaaacgtgc
    12781 ccggcgtcgt cagcacgacc gtgcggaagg cggagcccga aaaagtctgg cagtccgtgc
    12841 aatggcaaat aacgaccgtg gcggggtcga cctccgcctc gaatcggatg ctgccgcaat
    12901 ggcagccgcc ttcgatcttc atggcttctt cctttccacg tcaccgcccg cggttcaaat
    12961 gtgcgccagc tcaaattcct ctcccctagc gggggagagg agcctgattg ggaggagcct
    13021 gatcacgccg tgcgaacgag gctgagcacg gctccgccat cgcgaccctg gcccttcgct
    13081 tcctcctctt caacgacctg cggttgagct gggccgcgag cgtgctaggg ttctggcaat
    13141 gcgcgctgga tctccagcgc cgagccggtt cttgctacgc cacgaattga ttccctcgcc
    13201 gtttattggt ctttttggtg tgaagtccga tggtcgatag ttcttacttg tatatctgtg
    13261 taattgcctt cgttgcgatg ttcggtggcg ctctgatcgg gctcttcacg gcgcgggctc
    13321 taccagacca tcacctgagc agcgagtcag cgaccgtggt caagctgtca gccgctgttg
    13381 tcgtgtcgct tacgtctttg gtccttgccc tgatgttgtc atcggcgaac agttctttct
    13441 cggtcaatgc ggggatcgtg aagaaactca gttccgacct cattcatctg gatcacatgc
    13501 tgcggactta cgggccggaa gcgaatgagg cgcgtgcgaa tctgcgcgcc tatgcgacca
    13561 agaagaatga ggaattgttt cccgtgtcag acgtgccatc aacttccaat cgagagacct
    13621 ccgatctgtt ggacgcgctt ctcgacgcta tcctgtcgct gtcacccagc gaccgacgac
    13681 atactgtgct gatctcacag gctctgaccg tcacagacaa tatttacaat gaacgatggt
    13741 tgttatggga gaatcccggc accacagttc ccgtacaatt cctctttgtg ctgatcttct
    13801 ggctctttct catcttcgtc agcttcgggt tgttcgcacc cgtcaatctc atggtggtca
    13861 caagtttttt cctctcctcg ctcgctgtca caggagcaat tcttatgctc cttgaactgg
    13921 gtgatccgat gcaccacagc tggcttcaag tatccagtga gccaatgcgc cgcgcgctgc
    13981 tcgagatcgg ccgtccatag agagctgcgg tcgtccatcg gggcatcgga gacggtcaag
    14041 tctcggcgcc gccgttcacc tgaatcatct ggccgttgat gtaggcgccc gcgtcggaca
    14101 ccagcaggcg cgccgcggcg gcgacctcga ccggcctgcc catgcggccg agcggcactc
    14161 gggccagcgt ctgctggcgg gcctgcgcag aggcattggt ttcctcgacg tcgggcgcga
    14221 tcggtccggg cgagatggcg ttggccgtga tgttcctggg cccgaattcc acggccagcg
    14281 ccttggtgag cccccatacg ccgtgcttgg cgaccgacac cggcgtgcgt ccggcatggc
    14341 cgtggatggc gttcatgccg gtaaaattga cgatgcggcc ccagcccttg ttcagcatgc
    14401 cgggcaggca ggcgcgcgac agccacaccg cggcatcgag atcgacggag atgacgcgcc
    14461 gccagtcggc ctcgctcatc tccaggaacg gcttgttggg gcggagagct gcattgttga
    14521 tcagcacgtc gaccgcgccg aactgcttga tgacctcctc ggcgatgcgc ttgcactcct
    14581 ctgatttgcc gacatcgccc atgacaacca gcgtcctggc gccaagtttc tcggcctcct
    14641 tggcgacctt ctcgcaggcg gcgcgatcgc tcgagccgtt gatggcgacg tcgaagccat
    14701 cctcggccag gcccagcacg caggcgcgcc cgatgttgcg cccgccgccg gtgaccagcg
    14761 cggccttctt ggccttggcc atcagatcac gccgccggcc ttgagcgctg cgatcgcctt
    14821 gccgtcgtag cccaggctcg ccagcacctc gtcggtatgc tcgccgagct cgggcgtggg
    14881 ccgcagctcc ttgggctgcg gcgcgtcgga gaggttgatc ggctggccga ccaccttgat
    14941 gtcgccgagc ttgggatgct tcaccgcccg ggcgatgccg agatatttca cctgcggctc
    15001 ggcgaaggtc tggtcgatgg tgttgatcgg cccgcacggc acgcccgcct tgttcagcgc
    15061 ttccatccag tgcgccgacg tgttggtcct ggtgacggcg gcgatgcgct cgttcaccgc
    15121 cttgcggtgc tgcgagcgca ggctgggcgt ggcgtgctcg ggatggtcca aaagctcggg
    15181 cgcgcccagc gccttggcgc agcgcttcca cagattctcg cctgacgcgg cgatgttgat
    15241 gtggccgtcg ctggtcggga acacgccggt cgggatgccg gtgggatggt cgttgccggc
    15301 ctgcttgggc acctcgccct tgatcagcca gcgcgcggcc tggaagtcga gcatgaagat
    15361 ctgcgcctcg agcagcgagg tgtgaaccca ctggcccttg ccggtgcgct cgcggttgta
    15421 gagcgccagg atgatggcct gggcgagcag caggcccgag gtcaggtcgg cgatgggaat
    15481 gccgacccgc atcggcccgc ggccgggctc tcccgtgatc gacatcagcc cgcccatgcc
    15541 ctgggcgatc tggtcgacgc cggggcgcgc cgcatcgggg ccgctctggc cgaagcccgc
    15601 gatcgagccg tagacgatgc gcggattgat cttggccacc gtgtcgtagt cgaccttcag
    15661 gcgatgtttt acgtcggacc ggtagttctc gacgatgacg tcggccttct cggcgagctt
    15721 catgaagatc gcatggcctt gcgggctctt gaggttgagc gtcatcgcct tcttgttgcg
    15781 atgcaggttc tggaagtcga agccatggcg gtggccgccc atggcatcgg tcttgccctc
    15841 ggaggggggc tcgatcttga tcacatgcgc gccccagtcg gcgagctggc gcaccgcggt
    15901 cggcccggcg cggtgcgccg tgaggtcgag gacggaaatg tgggacaggg ggagcgtggt
    15961 catcagtggt tcctctttgc tgggagcgcg ccactccgtg gcgcaatctt ctcttcggcg
    16021 gggcatgggc gccactggag tggcgcgctc ccagcactaa cgtcctttga aagccggctt
    16081 gcgtttctcc atgaaagccc ggcggccttc cttgtagtcg tcgctgtcga agcaggcctg
    16141 ggtcatcttc tccagccgct tgtggtcctg cttggattcg ggcttggcga tctcgcgggc
    16201 ggccgccttg gcaagggcga tggtgagcgg ggcgttctgg gcgatggctg cggtgatctg
    16261 gccgaccagg gcatcgagct cggcgtccgc cgccacgccg ttcaccagac ccatgtcgta
    16321 ggcctcctgc gaggagtact gcttggcggt gaacaggaac tccatggcgc gcggcaggcc
    16381 gacgatgcgc gacagccgct cgatccgctg gaacccgtag cccaggccga gcttggccgc
    16441 cggcacgccg aagcgggcgc cttcgttgca atagcgcatg tcgcagcagg ccgcgaggtt
    16501 catgccgccg ccgatgcagt agccggtgat cttggcgatg gtcggcttgg caaagtcgta
    16561 gagcgcttcg tagccttgcc tggagatggc gtcgtagcgc acctgggcat cggcattggc
    16621 gcgttcgctc tcgaacttgg agatgtcggc gcccgacacg aacgccttgc cgccggcgcc
    16681 gctcaccacg acgcagcgga tctcggggtc cctctcgtag tccttgagga tgccgacaaa
    16741 ggcatcccac atgtcgagcg acacggcgtt gagcttggcc gggttgttga agacgaggtg
    16801 accgacagcg ccgtcgcgcc ggccgtagat cttctgttct tccatgacgc cgttcctccc
    16861 ggtgatgccg gcaatatagc gcgcgtccgg cgatttgaat aaggtgggct ggcagggagg
    16921 aaacatggcc tcagtcgaac tgaagggcct cagcaagcac tacggcaacg ccgtcgcggt
    16981 tgatggcgtg tcgctgcgcg tcgagcacgg ccagctcgtc tgcctgctcg gcccgtcagg
    17041 ctgcggcaag accacgacct tgcggctgat cgcgggcttc atcgagccct cggcaggcga
    17101 aatcgtggtc ggcggcaagg tgctgtcctc gccttctcgc acggtgccgc cggaaggccg
    17161 caacatgtcg atgatcttcc agagctatgc gctgtggccg cacatgacgg tggccgagaa
    17221 cgtggcctat ggcctgaaaa tccgcaagct cgacagggcc acgatcgagg ccaagctgaa
    17281 ggcgatcctg tcgacggcgc acctggaagc cctggccgac cgctaccccg gcgaactctc
    17341 gggcggccag cagcagcgcg tctcgctcgc ccgcgccctg gtggtcgagc ccgagaccct
    17401 gctgctcgac gaaccgctca gtaacctcga cgccaacctg cgcgaggaga tgcgcttcga
    17461 gatccgccgc ctgcacgacc gctaccgcta caccaccatc tacgtcaccc acgaccaggc
    17521 cgaggccatg accacggccg acctgatcgc cgtcatgaac cacggcaagg tcgagcagct
    17581 cgggccgccg gaggagattt ataaccgccc gcgctcggaa ttcgtggcgc gcttcatcgg
    17641 cggcgccaac atcctg
//
LOCUS       DASWGA010000901         2366 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1878048, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000901 DASWGA010000000
VERSION     DASWGA010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1878048"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="VF991_20845"
     CDS             complement(<1..395)
                     /locus_tag="VF991_20845"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9558954.1"
                     /translation="MAGRPHIVVVEDEAAGRQLLTGYLTARGYRVTAFASGVGLRRLV
                     ERELPTLVLLDIGLPGEDGLALARWLREKSNKICIIMVTSAGETVDRIVGLESGADDY
                     LPKPFEPRELLARIKSVLRRTNGMPPATPA"
     gene            complement(531..>2366)
                     /locus_tag="VF991_20850"
     CDS             complement(531..>2366)
                     /locus_tag="VF991_20850"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9558955.1"
                     /translation="TGCAQPTTPEWEMLVGKVARDRRTVHVSDAAADPAYGAGEAVGP
                     ERARSMLGIPMSRDGRLVGVLALARHHGEAFSEKQAEVAMLFADQAAIAIENVRLIDE
                     IRDKSRQLEKALKHKSQFLATMSHELRTPMNGVLGMIDVLEAEGPGKDQKHTLMMMRE
                     SAQVLLRNINDLLDYSRIEAGGLRLEELPFLLKDLIDGAVEVFQPQAARKGLSLLGVV
                     TPGSADAFLGDPTRVRQIIFNLLSNALKFTDRGGIMLRAGAEPANGDFARVTLSVRDT
                     GIGISAEQQSRLFRPFTQVDNSITRRFGGSGLGLSIVKQLAELMSGDVTVHSLPGSGA
                     TFTVTLKLKPAFADLRPGGVSNLQFAAPQPIAALPANIRGRALVVDDNPINCEVLLRQ
                     LKVLGIAAEPAADGFAGFSAWRAGDYDVVFADVHMPLMDGFTMTAEIRSIETNERRQR
                     TPIIAVTADALAGEEERCRAAGMDDYLAKPVGLDSLRKVLQRWLPDKDAKAPAIDPTV
                     LDPWVENDGSARRNILLKFSETVSSSSHDIEKAIATGDLATLRSAAHRLRSGALAVGA
                     RTLSESAAALESAAKTGDRPACEGQFGQLVAEMDRVRTQIDAQAP"
BASE COUNT          380 a          796 c          791 g          399 t
ORIGIN      
        1 gcgggcgtcg cgggcggcat tccgttggtg cgacgcagca cgctcttgat gcgcgccaga
       61 agctcgcgcg gctcgaacgg cttgggaaga tagtcgtcgg ccccgctttc gagaccgacg
      121 atgcgatcga ccgtttcgcc ggccgacgtc accatgatga tgcagatctt gttgcttttt
      181 tcccgcagcc agcgcgccaa ggccaagccg tcctcgccgg gcaggccgat gtcgagcaac
      241 accagcgtcg gcagctcacg ctcgaccagg cgacgcaagc cgacgcccga ggcgaaggcg
      301 gtcacgcgat agcctcgggc cgtcaggtag ccggtcaata actgacggcc ggccgcctca
      361 tcctcgacca cgacgatatg gggacgccca gccatgacag gactaatttt ttgcagatgc
      421 gcggaaaata atgcccagag gctaatgcaa ttcgcaggcc gcgccaagcc gtgtcggacg
      481 gccgctgggc tgtgccaacc ggggaaatat cgatcggtct ggtcgcccgg ctagggggcc
      541 tgggcgtcga tttgcgtgcg cacgcggtcc atttcggcga ccagctggcc gaactgaccc
      601 tcgcaggccg gtcgatcgcc ggtcttggcc gcgctctcca gcgccgccgc cgattcgctc
      661 aatgttctcg ccccgacggc cagcgcgccg ctgcgcagcc ggtgcgcagc cgacctgagc
      721 gtggcgaggt cgcccgtggc gatcgccttc tctatatcat gggacgacga cgacaccgtt
      781 tcgctgaatt tcagcagtat attgcgccgc gcactgccgt cattctcgac ccacgggtcg
      841 agcacggtcg ggtcgatggc cggcgccttg gcgtccttgt cgggaagcca gcgctgcaac
      901 accttgcgca ggctgtcgag gccgaccggc ttggcaagat agtcgtccat gcccgccgcg
      961 cggcaacgtt cctcttcgcc ggccagcgca tcggccgtca cggcgatgat cggcgtccgc
     1021 tggcggcgtt cgttggtctc gatcgagcga atctcggcgg tcatggtgaa gccgtccatc
     1081 agcggcatgt ggacgtcggc aaacaccacg tcgtaatcgc cggcgcgcca ggcgctgaag
     1141 ccggcaaatc cgtcggccgc cggttcggcg gcaatgccca ggaccttgag ctggcgcaac
     1201 aggacttcgc agttgatcgg attgtcgtcg acgaccagcg cgcggccacg gatgttggcc
     1261 ggcagcgcgg cgatcggctg gggagcggcg aactgcaggt tggaaacgcc gccgggccgc
     1321 aaatcggcga aggccggctt cagtttcaat gtcacggtga acgtcgcgcc ggagccgggc
     1381 aggctgtgca ccgtgacgtc gccggacatc agttcggcaa gctgcttgac gatcgacagc
     1441 cccagtccgc tgccgccgaa gcggcgcgtg atcgagttgt cgacctgcgt gaacggcctg
     1501 aacaggcggg actgctgctc ggcgctgatg ccgatgccgg tgtccctcac cgacaaggtc
     1561 acgcgggcaa agtcgccatt ggccggctcg gcgccggcgc gcagcatgat gccgccgcgg
     1621 tcggtgaact tgagcgcgtt ggagagaaga ttgaaaatga tctggcgcac ccgcgtcgga
     1681 tcacccagga aggcgtcggc cgagcccggc gtgacgaccc cgagcagcga cagccccttg
     1741 cgcgcggcct gcggctggaa gacttcgacc gcgccgtcga tcagatcctt gagcaggaac
     1801 ggcagctcct cgagccgcag ccctccggcc tcgatcctgg agtaatcgag cagatcgttg
     1861 atgttgcgca gcagcacttg cgccgattcg cgcatcatca tcagggtatg cttctggtcc
     1921 ttgcccgggc cctcggcctc gagaacgtcg atcatgccga ggacgccgtt catcggcgtg
     1981 cgcagttcgt ggctcatggt cgcgaggaac tgcgacttgt gcttcagcgc cttctcgagc
     2041 tgccggctct tgtcgcgaat ttcgtcgatc aggcgcacgt tctcgatggc gatggcggcc
     2101 tggtcggcaa acagcatggc cacctcggcc tgcttttccg agaacgcctc gccgtgatgg
     2161 cgggcgaggg ccaggacgcc gaccagccgg ccgtcgcggc tcatcggaat gccgagcatc
     2221 gagcgcgccc tctccggccc caccgcctcg ccggcgccat aggcagggtc ggccgccgca
     2281 tcgctgacgt gcaccgtccg gcgatcgcgc gccaccttgc cgaccagcat ctcccactcc
     2341 ggcgtggtcg gctgggcgca gccggt
//
LOCUS       DASWGA010000902         5342 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_227054, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000902 DASWGA010000000
VERSION     DASWGA010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5342
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227054"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..994)
                     /locus_tag="VF991_20855"
     CDS             complement(<1..994)
                     /locus_tag="VF991_20855"
                     /inference="COORDINATES: protein motif:HMM:NF024748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9558956.1"
                     /translation="MDLYRRRLPLLAASALVASPIGVRAQAPGGGGRLQAAIGRFAAL
                     PAASCLIVADHPASPWQASHQPATRLFVGSAIKTFILAQYLRDVEEGRLSEDKQMAIN
                     DSVRSLNSPVFRALSGTTPAVSVLEAMITHSDNTATDVAMGAVGADRVRGLIAQAGLK
                     STQIPESTRRLFSYLAGAPEGVDVGWPGVQRLADAAPGSAGSGAAGRPALNDRQTMAS
                     TAEDMVHWYRQALIGAFFKKPGTLVEFKRIQAMADALVHVVPTDSVAYGKGGSIDWQG
                     FHCFCLPGQMIVGKVPVTFCFTINWTGPADGVGAVFQSYRTAIADTLQEAARAVG"
     gene            1348..1542
                     /locus_tag="VF991_20860"
     CDS             1348..1542
                     /locus_tag="VF991_20860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558957.1"
                     /translation="MVDDFIMRAIFEEELGLRYKSPSGDDPVPAVEALRGGLPETAAL
                     ERGLLRRLLAEAGTFKGTKL"
     gene            1539..3011
                     /locus_tag="VF991_20865"
     CDS             1539..3011
                     /locus_tag="VF991_20865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HEX9558958.1"
                     /translation="MTDTAVVARDASPVELSEDWLAVIVGIGIFALCLLGTVGPDLVG
                     WVVTTSVWTTPDKALAPFSKAYASLSSFGSLLVTYGALLAVLGAAAVSLKTDIRRFAI
                     AFTVVFFLAYGSWIVGSQANLAAVTPADLAKFGLSWSLRLTNEGGYIVALVLGLVIAN
                     FFPRFADWLSAAIRPELYIKIAIVIIGASLAVTAVGKLNLATSLLLRGVAAIIEAYLI
                     YWAVVYFVARKWFGFSREWSAPLASGISICGVAAAIATGGAIRARPVVPVLVSSLVVI
                     FAVVEVLVLPFLAQTFLWHEPLVAGAWLGLAVKTDGAALAAGGITDALIVAKAAGEGI
                     NYQPGWILGTTATVKVFIDIFIGVWTFILGYVWTNHINKVAGSARARPVEIWQRFPKF
                     ILGFLVTFIVGLAVALSIDGSMTARFNSAVAESNVFRVIFFILTFFSIGVLSDFRKLW
                     QQGLGKLAAVYFVSLFGFVIWVGLLISWLFFAGVKPPTAG"
     gene            3032..3187
                     /locus_tag="VF991_20870"
     CDS             3032..3187
                     /locus_tag="VF991_20870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558959.1"
                     /translation="MSDLHSLKQELSKNEVEPLLSIEKKLIGWSLGLGIGLLVGLAVL
                     NRLFPFL"
     gene            complement(3207..4049)
                     /locus_tag="VF991_20875"
     CDS             complement(3207..4049)
                     /locus_tag="VF991_20875"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9558960.1"
                     /translation="MATIDVQVHCYERNHPGRPWAAVLAGPPEVTAADMVKAMDEVGV
                     DGGLLVSVWTMYRWDASYALAVRKAHPGRFAVIKPVDPNDPKVADTIADWAKTDGTVA
                     IRIMMAPDVSTDAADPGINRVLAAAAKHDLPVNLMCRGRLEQVGKMAASHPDTTLVID
                     HLGLEQPFKPPAPAQPWIELPKLLALAAHKNIVVKISGACTLSHQKFPYKDIWDPLCR
                     IFDTFGLNRCMWGTDWTRATALLTYKEGVDSFRVTDRLSDSDRAILMGGTLQKVYGWA
                     PSKA"
     gene            complement(4233..4889)
                     /locus_tag="VF991_20880"
     CDS             complement(4233..4889)
                     /locus_tag="VF991_20880"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007532219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX9558961.1"
                     /translation="MLSIGSQAPDFEAETTEGPIRFHDWIGDKWAVLFSHPKDFTPVC
                     TTELGYMARIKPEFDYRGVKIIGLSVDPVQSHSGWARDIKETQGFAPNYPLIGDTDLK
                     VSKLYGMLPAEVPGQAEGRTPIDNQTVRNVFVIGPDKNIKLILVYPMTTGRNFDEVLR
                     VIDSLQLTAKHKVATPVNWRQGEDVIIAGSVSDEEARKRYPAGWRAPKPYLRIVPQPS
                     "
     gene            5084..>5342
                     /locus_tag="VF991_20885"
     CDS             5084..>5342
                     /locus_tag="VF991_20885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX9558962.1"
                     /translation="MIFRINRCTVDTAAFELRRDEAVVAVQPQVFDLLVFLLENRHRV
                     VTKDEIFERIWKNRIVSEAALSSRIKAVRQAIGDDGTEQGCI"
BASE COUNT          862 a         1750 c         1700 g         1030 t
ORIGIN      
        1 atccgaccgc tcgggccgcc tcctgcaggg tgtcggcgat ggcggtcctg taggactgga
       61 agacggcgcc gacgccgtcc gccgggcccg tccagttgat ggtgaagcag aaggtgacgg
      121 gcaccttgcc gacgatcatc tggcccggca ggcagaagca gtggaagcct tgccaatcga
      181 tgctgccgcc cttgccgtag gccaccgagt cggtgggcac gacgtggacc agcgcatcgg
      241 ccatcgcctg gatgcgcttg aactcgacca gcgtgccggg cttcttgaaa aaggcgccaa
      301 tcagggcctg ccggtaccag tgcaccatgt cctcggcggt gctcgccatc gtctggcggt
      361 cgttgagcgc cgggcggccg gcggcgcctg aaccggcact gccgggcgct gcgtcggcga
      421 ggcgctgcac gcctggccag ccgacatcca ccccttccgg cgcgccggca agataggaga
      481 acagccgccg agtcgattcg gggatctgcg tcgacttcag gccggcttgg gcgatcagcc
      541 cgcgcacgcg atcggcgccg accgcgccca tcgccacgtc ggtcgcggtg ttgtcgctgt
      601 gggtgatcat ggcctccagc acgctcaccg ccggcgtcgt gccgctgagc gcgcgaaaca
      661 ccgggctgtt gagcgacctt accgaatcgt ttatcgccat ctgcttgtct tcgctgagcc
      721 ggccctcttc gacgtcgcgc agatactgcg ccaggatgaa ggtcttgatc gcgctgccga
      781 cgaacaggcg cgtcgctggc tgatgcgacg cctgccacgg actggcggga tgatcggcga
      841 cgatcaggca actcgcggcc ggcagcgcag cgaagcggcc aatcgccgcc tggaggcggc
      901 cgccaccacc cggcgcctgg gcgcgcacgc cgatcggcga agccaccagc gccgacgcgg
      961 caagcaatgg caggcggcgg cgataaagat ccatgatggc tatcctcgac tgacagggcg
     1021 ctaccggccg aagaatgggc cgacggcgat gttcgagtcc acatcctagc gcgtggacca
     1081 agcgcaaacg caccaatttc cagcgctgca tcgaaccaaa gcatatcgtt ccgcccggct
     1141 cggcaaatcg atcgactcgt ttcattgacc gacaatggag tcgcagccaa ttgtttagct
     1201 gatactggag tcgatccatg aacgtgtttt cgtccgctcg tcgtcgctgt ccgggctcgt
     1261 cgcgcttcac cgcctgacct cgcggcccat cgcggccgcc ccatcgttcc gtcccagcct
     1321 tccaggccca gcgcaaggag ccctgacatg gtcgacgact tcatcatgcg cgcgatcttc
     1381 gaggaggagc tggggcttcg ctacaaatcc cccagcggag acgaccctgt accggcagtt
     1441 gaggcactgc gcggcggcct acccgagacc gccgcgttgg agcgcggcct cctgcgtcgc
     1501 ctcttggccg aggccggcac cttcaagggg accaagctat gacggatacc gctgttgttg
     1561 cccgcgatgc ttcccctgtg gagctgagtg aagactggct cgccgtcatc gtgggcattg
     1621 gcatctttgc actttgcctg ctgggcactg tcggtcccga ccttgtgggc tgggtcgtca
     1681 cgacatcggt ctggacgacg ccggacaagg ccctcgcgcc gttctccaaa gcctacgctt
     1741 cgctgagcag cttcggttcc ctgcttgtca cctatggggc gcttctcgcc gtccttggtg
     1801 ccgccgcggt ctccttgaag acggacatcc ggcgcttcgc gatcgctttc accgtcgtct
     1861 tcttcctcgc atacggaagc tggatcgtcg gcagccaggc gaacctcgcc gccgtcacgc
     1921 cggccgatct cgccaagttc ggtctttcat ggtcgctcag gctcacgaac gaaggcggat
     1981 acatcgtggc cctcgtgctt ggcctggtga tcgccaattt ctttccgcgc ttcgccgatt
     2041 ggctcagcgc cgcgatccgt cccgaactct acatcaagat tgcgatcgtg atcatcggcg
     2101 cgtcgctcgc cgtgaccgcg gtcggcaagc tcaacctcgc gacctcgctg ttgctgcgcg
     2161 gcgtcgcagc catcatcgaa gcctatctga tctattgggc cgtggtctat ttcgtggcgc
     2221 gcaaatggtt cggcttcagc cgcgaatggt cggcgccgct ggcgtcaggc atctcgatct
     2281 gcggcgttgc ggcagcgatt gcgacaggcg gcgccatccg cgcccgcccc gtcgtgcccg
     2341 tactcgtctc ctctctcgtg gtgattttcg ccgtcgtcga ggtgctcgtc ctgccgttcc
     2401 tcgcgcagac cttcctgtgg cacgaaccct tggtcgcggg cgcctggctt ggccttgccg
     2461 tcaagaccga cggcgcggcc ctggcggcgg gcggcatcac cgacgcgctc atcgtggcga
     2521 aggccgccgg cgaaggcata aattaccagc cgggctggat cctcggcacc acggccacgg
     2581 tgaaggtgtt catcgacatc ttcatcggcg tctggacatt catcctgggc tacgtctgga
     2641 ccaaccacat caacaaagtc gcgggcagcg cccgcgccag gccggtcgaa atctggcagc
     2701 gctttcccaa gttcattctg ggattcctgg tcaccttcat tgtcggcctc gccgtcgcgc
     2761 tgtcgatcga cggcagcatg acggcgcgtt tcaacagcgc tgtcgccgag agcaatgtct
     2821 tccgggtgat cttcttcatc ctcaccttct tttccatcgg cgtgctgtcg gacttccgca
     2881 agctctggca gcagggcttg ggaaagctgg cggcggtcta tttcgtcagc ctgttcggct
     2941 tcgtgatctg ggtcggattg ctgatctcgt ggctgttctt tgccggcgtg aagccgccga
     3001 ccgccggctg actcggaagg gaatggtcgt catgtcggat ctgcactctc tcaagcagga
     3061 gctgtccaag aatgaggtcg agccgctcct gtcgatcgag aaaaagctca tcggctggag
     3121 cctgggcctc ggcatcggct tgctggtcgg actggctgtc ctcaaccggc tgtttccgtt
     3181 cctttgagcc tatcctgagc gatccatcac gcctttgatg gcgcccagcc gtagaccttc
     3241 tgcaaagtgc cgcccatgag aatggcccgg tcgctgtcgg acaggcggtc ggtgacgcgg
     3301 aaggagtcga ctccctcttt gtacgtcagc agcgccgtgg cgcgggtcca gtcggtgccc
     3361 cacatgcagc ggttcagacc gaacgtatcg aagatgcggc acagcggatc ccagatgtcc
     3421 ttgtagggaa acttctggtg gctgagcgtg caggcgccgc tgatcttgac cacgatgttc
     3481 ttgtgggccg ccaatgccag aagcttcggc agctcgatcc agggctgcgc cggcgccggc
     3541 ggcttgaagg gctgctcgag gccaaggtgg tcgatcacca gggtcgtgtc gggatggctc
     3601 gccgccatct tgccgacctg ctcgaggcgg ccgcggcaca tcaggttgac cggcaggtcg
     3661 tgcttggccg cggcggccag cacgcggttg atgccggggt cggcggcgtc ggtcgacacg
     3721 tcgggcgcca tcatgatgcg gatggcgacg gtgccgtcgg tcttggccca gtcggcgatg
     3781 gtgtcggcca ccttgggatc gttgggatcg accggcttga tcaccgcgaa gcggccggga
     3841 tgcgccttgc gcacggcgag cgcgtagctc gcatcccagc gatacatcgt ccataccgag
     3901 accagcaagc cgccgtcgac gccgacctcg tccatcgcct tcaccatgtc cgcagccgtc
     3961 acctcgggcg gcccggcgag aaccgcggcc catggccggc cggggtgatt gcgctcatag
     4021 caatgaacct ggacatcgat cgtcgccatg aggtctcctc ccgttcaatc gacggcgagg
     4081 ctagggcgcg gccccatggc attcaagcat ggccgcctga caatgtttga ccggagaaac
     4141 ggcagctact cggtctccag cacgcgtctt gacgcccagc ccgccggcat tcggcgtcgc
     4201 gacgatcgcg cgctccttct gttccccggc gtctagctgg gttgaggcac gatccgcaga
     4261 tagggcttgg gcgcccgcca gcctgccggg tagcgcttgc gcgcctcctc gtcggagacc
     4321 gagcccgcga tgatcacgtc ctcgccctgc cgccaattga ccggcgtcgc caccttgtgt
     4381 ttggccgtga gctgaagcga gtcgatgacc cgcaggacct cgtcgaagtt gcgacccgtc
     4441 gtcatgggat agaccaggat cagcttgatg ttcttgtccg gaccgatgac gaacacattg
     4501 cgcaccgtct ggttgtcgat cggtgtgcga ccctcggcct ggccgggaac ctccgccggc
     4561 agcatgccgt agagcttgga gaccttcaga tcggtatcgc cgatcagcgg atagttgggc
     4621 gcaaagccct gcgtttcctt gatgtcgcgc gcccagccgc tatggctctg caccggatcg
     4681 accgacaagc cgatgatctt cacgcctcgg tagtcgaatt ccggcttgat ccgggccatg
     4741 tatcccagtt cggtggtgca aacaggcgtg aaatccttcg gatgcgagaa caggacggcc
     4801 catttgtcgc cgatccagtc atgaaaccgg attgggccct cggtggtttc ggcctcgaag
     4861 tcgggcgcct ggctgccaat ggagagcatg ggaatctcct tcaatcggag gttgaaggcc
     4921 ggagagcggc cacccccatt gatgcgacat tgcgcaagac gggaattgac gaaaacgtgg
     4981 attctagctg gagaaaacct ggattctcgc cgttgccggc cgatcggcca cgcctggctt
     5041 gttgccttgg cccaccggcg catgagacac aggcggcaag gccatgattt tcaggataaa
     5101 ccgctgcacg gtcgacaccg ctgccttcga actgcggcgg gacgaagccg tcgttgctgt
     5161 acaaccccag gttttcgacc tgctggtgtt cctgctcgaa aaccggcacc gcgtcgtcac
     5221 caaggacgag atcttcgagc gcatctggaa gaaccgcatc gtgtccgagg cggcgttgag
     5281 cagccgcatc aaggcggtcc ggcaggcgat cggcgacgac ggcaccgagc agggttgcat
     5341 ca
//
LOCUS       DASWGA010000903         3073 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2006345, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000903 DASWGA010000000
VERSION     DASWGA010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3073
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2006345"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..547)
                     /locus_tag="VF991_20890"
     CDS             complement(101..547)
                     /locus_tag="VF991_20890"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9558963.1"
                     /translation="MTEHYSGPTNGEEPASAQPRLLIVEDELMIAWALVDTVRELGWK
                     VCATVRTQEAAVESASQLKPDAILMDYRLGDGGDGLAAARRIREVADIPIIFCTAYVA
                     GLRPEMLSLPRAQLVAKPVRPSSLREALAWATDIAKLEEGRPQLTR"
     gene            complement(634..1932)
                     /locus_tag="VF991_20895"
     CDS             complement(634..1932)
                     /locus_tag="VF991_20895"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558964.1"
                     /translation="MTRSRYRWFIVFLLFAITVVNYIDRAAISYAIPLMQRDLDLSPA
                     DTGTILGAFGIGYALSTLVGGFAVDRYGARVVLTVAAVLWSLSIGATALAGGLAVLYA
                     ARVLLGLSEGPNFPALTGAVSHWLSPHERATALGNALLAVPLALAIGGPLVSALLGWL
                     DWRLTFAALFILSVAWVPLWYFLFRDSPADSGHVNAAELAHIRTSDPAVSASPHAVLK
                     SWPEPGVLKALLTNPTLLANYWAFFVFGYFLFFFMTWLPSYLERAYGLNLAAVGLFTV
                     LPWLAAALLLWLLGRWSDHLLKTTGRLRIARSYLIAGSQLVAALAVVPVALTNNLAVA
                     IAGITVAVAASMGANAAYYAVNVDIVPQRAATALGIMDFGFAIAGFLAPALTGWMLDL
                     RGSFADCFLLMTGLALSSVLVVLLFHRPDRDRESPAGSMA"
     gene            complement(1940..2551)
                     /locus_tag="VF991_20900"
     CDS             complement(1940..2551)
                     /locus_tag="VF991_20900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX9558965.1"
                     /translation="MSIDFLLTSLIVVVSPGIGVLFTLATGLSRGGRASVVAAFGCTL
                     GIVPHMAAAIMGLAALLHTSAIAFQTLKYLGVAYLLYMAWMTLKEHGALQVDKEVGAK
                     SATQVIVQAILINILNPKLSIFFFAFLPQFVSADEAQPLLRMSELSAVFMLLTFVVFV
                     GYGLFAASIRNHVISRPRVLVWMRRAFAGAFAALGAKLALADR"
     gene            complement(2560..2916)
                     /locus_tag="VF991_20905"
     CDS             complement(2560..2916)
                     /locus_tag="VF991_20905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9558966.1"
                     /translation="MKHSCPVTAFQKLINGKYKLRIVWDLQDGPRRYSEIRNGLLRGA
                     EGSREIAPRVLSRELKALVLSGLIDRKDYGVVPPRVEYRLTRKGRSFVPVIAAIRNWG
                     ARHLAAGGEDYGIAAE"
BASE COUNT          632 a          958 c         1049 g          434 t
ORIGIN      
        1 gaacgggctg atcaagctgg aagccgtcgg ccggacgatc cttctgaatg acaaggcgag
       61 cctgaggcgg ctcaatgcct gagcggggcg ccgaccgaag ctagcgagtg agctgcggtc
      121 ggccttcctc cagctttgca atgtccgttg cccaggcgag agcctcccgc aatgaagacg
      181 gtcgcacggg cttggcgacg agctgggcgc gcggcagcga tagcatctcg ggacgcaggc
      241 cggccacgta ggccgtgcaa aagatgatgg gaatgtcggc aacttcgcga attcgacgcg
      301 cggcggcgag tccgtcaccg ccgtctccca gccggtagtc catcaagatg gcatccggct
      361 tcagctgcga tgccgactcg acggcggcct cctgggtcct gaccgtcgcg cacaccttcc
      421 agcccagctc gcggaccgta tcgaccagcg cccacgcgat catcagctca tcctcgacga
      481 tcagcagccg cggttgcgcg gaggccggct cttctccatt ggttgggcca gaatagtgtt
      541 cagtcatcaa acaaataggg cgtttcccga tccagctaac gctcgggacg cacaatcgtt
      601 acatcctaaa gatggcgtcg ccgggcctcc ccgttaagcc atcgagcctg ccgggctctc
      661 gcgatccctg tcgggccgat ggaacaagag cacgaccagc accgacgaca gggcgaggcc
      721 cgtcatcagg agaaagcagt cggcgaacga gccgcgcaga tccagcatcc agccggtgag
      781 ggccggcgcg aggaagcccg cgatggcgaa gccgaaatcc atgatgccga gcgccgttgc
      841 cgcccgctgc gggacgatat cgacgttcac ggcgtagtag gcggcgttgg cgcccatcga
      901 ggcggcgacc gccaccgtga tgccggcgat ggccaccgcg aggttgttgg tcagggccac
      961 cggaacgacg gcgagcgctg cgacgagctg gctgcccgcg atgagatagg agcgggcgat
     1021 gcgcaggcgg ccggtggtct tcagaagatg gtccgaccag cgcccgagca gccacagcag
     1081 cagcgcggcc gcaagccacg gcagcaccgt gaacagcccc acggccgcga ggttgagccc
     1141 atacgcccgt tccagatagc tcggcagcca ggtcatgaag aaaaacagga aataaccgaa
     1201 gacgaagaag gcccaatagt tggcaagcag cgtcgggttg gtgaggagcg ccttcagcac
     1261 gcccggctcg ggccaggatt tcaggacggc atgcggcgag gcggagaccg cgggatcgct
     1321 cgtccggata tgggcgagct cagccgcatt gacgtggccg gagtcggccg gactgtcgcg
     1381 gaacaggaaa taccacagcg gcacccaggc gacggacagg atgaacaggg ccgcgaacgt
     1441 gaggcgccag tcgagccagc ctaaaagcgc gctgacgagg ggcccgccga tggcaagcgc
     1501 cagcggcacg gcgagcaggg cgttgcccag cgcggtggcc ctttcgtgag gcgaaagcca
     1561 gtgactgacc gcgccggtga gcgcggggaa gttgggacct tccgacaagc ccagcagcac
     1621 gcgcgccgcg tagagaacgg cgagaccgcc cgcgagcgcg gtggcgccga tcgacaggct
     1681 ccacaagacg gcggcgacgg tgagcaccac gcgcgcgccg taacgatcga cggcaaagcc
     1741 gccgaccagg gtggagaggg catagccgat gccgaacgcc ccgagaatgg tgccggtgtc
     1801 cgccggcgag aggtcgaggt cacgctgcat caggggaatg gcataggaga tggcggcgcg
     1861 atcgatgtag ttgacgacgg tgatggcgaa caaaaggaag acgatgaacc agcggtaccg
     1921 gctacgcgtc atccgttgct cagcgatcgg cgagggcgag cttggccccc agggcggcaa
     1981 acgcgccggc gaaggcgcgg cgcatccaga ccagcacgcg cggccgcgag atcacgtggt
     2041 tgcggatcga agcggcgaac aggccgtagc cgacgaaaac aacgaaggtc agcagcatga
     2101 acacggcact gagctcggac atgcgcagca gcggctgggc ttcgtcggca ctcacgaact
     2161 gcggcaggaa ggcgaagaag aagatcgaga gcttggggtt gaggatattg atgagaatgg
     2221 cctggacgat cacctgcgtc gccgatttgg cgccgacctc cttgtcgacc tggagcgcgc
     2281 cgtgctcctt caacgtcatc caggccatgt agaggagata ggccacgccg agatacttca
     2341 gggtctggaa ggcgatcgca ctggtatgca gcagcgccgc cagtcccatg atggccgccg
     2401 ccatgtgcgg cacgatgccc agcgtgcagc cgaaggccgc gacgacgctg gcgcgcccgc
     2461 cacgcgacag gccggtggcc agggtaaaca gaacgccgat gcccggcgag acgacgacga
     2521 tcagggacgt cagcagaaaa tcgatgctca tggcgttacc tactccgctg caatcccgta
     2581 gtcctcgccc ccggcagcga ggtggcgcgc gccccagttg cggatggcgg cgatgacggg
     2641 aacgaaactt cttcccttgc gcgtcaggcg atactcgacc ctgggcggta cgacgccata
     2701 atccttgcgg tcgatcaagc ccgacagtac gagcgccttc aattcgcggc tgagaacgcg
     2761 cggcgcaatc tcgcggctgc cctcggcgcc gcgcaacagg ccgttcctga tctcgctgta
     2821 gcggcgcggg ccgtcctgca aatcccacac gatccgcagc ttgtatttgc cattgattag
     2881 tttctggaag gccgtgaccg ggcaactgtg cttcatggtc gtgctccgcg ttccgggccg
     2941 acagtatcat ttttgtccat acttgcgcga atgctcctta ggccgccaaa tgaccggcac
     3001 cgaggatcga ccgcaggagc gcgcgatgaa gcagtttctc atcaagtacc ggttcagcaa
     3061 ggggacgaag gag
//
LOCUS       DASWGA010000904         2957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1118507, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000904 DASWGA010000000
VERSION     DASWGA010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2957
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1118507"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VF991_20910"
     CDS             <1..631
                     /locus_tag="VF991_20910"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008123364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9558967.1"
                     /translation="GAFAGMARGSIFVDNTTASADIARELHAEGKKGGIDFIDAPVSG
                     GQAGAENGQLTVMCGGEQGPFDKAKPVADSYAKAVTLIGGPGAGQLTKMMNQMCIAGI
                     VQGLAEAINLGQKAGVDMDKAIGAISKGAAQSWQMDNRWKAMVEGKFEFGFAVDWMRK
                     DLGISLAEGKRDKAQMPLVALVDQFYARVQERGGGRWDTCSLIQLLQKP"
     gene            642..1274
                     /locus_tag="VF991_20915"
     CDS             642..1274
                     /locus_tag="VF991_20915"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEX9558968.1"
                     /translation="MTYKLYGRAGWGSTIVETQLVWYGLPFTFEPVDDLFKSPEARRR
                     LEKVNPLAQVPTLVMPDGSVMSESAAITLLLADITGKDTLVPSAGAPERAKFLRWLVF
                     LVANIYPTFTYADDPSRFISLTAARDPFRAATDAYAQKLWRQIDGEVGSPWFLGIRFS
                     ALDIYLDVMSRWRPKRGWFETETPHLFAIARRTDQVPELAEVWKRNFPAG"
     gene            1286..1960
                     /locus_tag="VF991_20920"
     CDS             1286..1960
                     /locus_tag="VF991_20920"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047689 - aspartate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HEX9558969.1"
                     /translation="MTCVGIVGGLGVGATVHYYEKITASCKARGVVPDLVIVHADVDR
                     GQGLVRAGKLDELADYLAAFIDRLGRAGATAAALPAVTPHICIAELMKRTRLPLINIV
                     DPIAAELRAREIGRVALFGTTFTMEGGLWGQLAGVEIVKPRPDEIAVIGAAYQRILDT
                     QTADAGDAAALRRIAGDLARRDGVEAILLAGTDLALMFDEATAGFPAIDVARLHIDAI
                     VERLAE"
     gene            complement(2076..2345)
                     /locus_tag="VF991_20925"
     CDS             complement(2076..2345)
                     /locus_tag="VF991_20925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558970.1"
                     /translation="MSAVPSSAVLALKRNSSTVRYCFEADAEPGVLPRALELLAKRGL
                     VPARVFAQADADLLSVEIEVEGLEPDTADHVGRCLGEIVGVRQTF"
     gene            2515..>2957
                     /locus_tag="VF991_20930"
     CDS             2515..>2957
                     /locus_tag="VF991_20930"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9558971.1"
                     /translation="MRSTPIYEVHAVKYAHLPRKAWEVQITPDPHDADFPMDYFVWAA
                     IPLDESGHRTIGGKPIVIDTGFNAAVGKKRGREVKTNPADLLGHLDIDATEVEDVIIT
                     HLHYDHVGNWDRFPKARFHLQDKEMQFATGRHVCHGTFRHAFEIE"
BASE COUNT          517 a         1010 c          984 g          446 t
ORIGIN      
        1 cggggcgttc gccggcatgg cccggggctc gatctttgtc gacaacacca cggcctcggc
       61 cgacatcgcc cgcgaactgc atgccgaggg caagaagggg ggcatcgact tcatcgacgc
      121 gccggtgtcg ggcggccagg ccggggcgga gaacggccag ctcaccgtga tgtgcggcgg
      181 cgagcaaggc ccgttcgaca aggcgaagcc agtggccgat tcctacgcca aggcggtcac
      241 cctgatcggc gggccgggcg cgggccagct caccaagatg atgaaccaga tgtgcatcgc
      301 cggcatcgtc cagggactgg ccgaggcgat caatctcggc cagaaggcgg gcgtcgacat
      361 ggacaaggcg atcggcgcca tctccaaggg cgcggcgcaa agctggcaga tggacaaccg
      421 ctggaaggcc atggtcgagg gcaagttcga gttcggcttc gccgtcgact ggatgcgcaa
      481 ggacctcggc atctcgctcg ccgagggcaa gcgcgacaag gcgcagatgc cgctggtcgc
      541 cctggtcgac cagttctacg cccgcgtgca ggagcgcggc ggcgggcgct gggatacctg
      601 cagcctgatc cagctcttgc agaaaccctg acgggaaaaa catgacctac aagctctacg
      661 gccgcgccgg ctggggctcg accatcgtcg agacccagct cgtgtggtac ggcctgccct
      721 tcaccttcga gccggtcgac gacctgttca agtcgcccga ggcgcgccgc aggctcgaga
      781 aggtcaatcc gctggcccag gtaccgacgc tggtgatgcc cgacggcagc gtgatgagcg
      841 agagtgccgc catcacgctc ttgctggccg acatcacggg caaggacacg ctggtgccgt
      901 cggcgggcgc gccggaacgg gcgaagttcc tgcgctggct ggtgttcctg gtcgccaata
      961 tctatcccac cttcacctac gccgacgatc cgtcgcgctt catctcgctc accgcggcgc
     1021 gcgatccgtt ccgcgccgcg accgacgcct atgcccagaa gctgtggcgc cagatcgacg
     1081 gcgaggtcgg cagtccgtgg ttcttgggca ttcgcttttc cgcgctcgac atctacctcg
     1141 acgtcatgag ccgttggcga cccaagcgcg gctggttcga gaccgagacg ccgcacctct
     1201 tcgccatcgc ccgccgcacc gatcaggtgc ccgagctggc cgaggtgtgg aagcgcaact
     1261 ttccggcggg ctgaagtctc gcggcatgac ttgtgtcggg atcgtcggtg ggctgggcgt
     1321 cggcgccacg gtccactact acgagaagat caccgcttcg tgcaaagccc gcggcgtggt
     1381 gcccgacctg gtgatcgtcc atgccgacgt cgatcgcggg caaggcctgg tccgcgccgg
     1441 caagctcgac gagctggccg actatctcgc cgccttcatc gaccggctcg gccgcgccgg
     1501 cgcgaccgcc gcggcgctgc ccgcggtcac cccgcacatc tgcatcgccg agctgatgaa
     1561 gcgcacgcgc ctgccgctca tcaacatcgt cgatccgatc gccgcggagc tgcgggcgcg
     1621 cgagatcgga cgcgtggcgt tgttcggcac gaccttcacc atggaaggcg gcctgtgggg
     1681 ccagcttgcc ggcgtcgaga tcgtgaagcc ccggcccgac gagatcgccg tcatcggcgc
     1741 cgcctatcaa cgcatcctcg acacgcagac ggccgatgcc ggcgatgccg cagccctgcg
     1801 ccgcattgcc ggcgacctgg ctcgccgcga cggcgtcgag gcgatcctgc tcgccggcac
     1861 cgaccttgcg ctgatgttcg acgaggcgac ggccggcttc cccgccatcg acgtcgcccg
     1921 cctgcacatc gacgcgatcg tcgagcggtt ggctgaatag cgatcggcgc gtcatggtct
     1981 tccggaccgc gcgcatcttg cgcgctcatg agcgagcggg acgctcgcgg tccggaaaaa
     2041 tatgatcgcg cgactggagt cgcgcgcccc cagcatcaaa atgtctgcct caccccgacg
     2101 atctcgccga ggcagcggcc gacatggtcg gcggtgtcgg gctcgagccc ctcgacctcg
     2161 atctcgaccg aaagaagatc ggcatcggcc tgggcgaaga cgcgcgccgg caccaggccg
     2221 cgcttggcca agagctcgag cgcgcgcggc agcacgcccg gttcggcgtc ggcttcgaaa
     2281 cagtatcgaa cggtggaaga attacgcttg agcgccagga cggcggatga aggcacggcg
     2341 gacatggaac gactccccgg atgacggacg aacagcaacg ggccggtttg cagggcaaac
     2401 cggcgtgcta attcgccgag cgaggaggtc caggcgggcc atcccggcac tatagtcccg
     2461 gacgcggccg gcgggctagg ctcggcttgg cgatcccacg ggaaggaaac aaaaatgcgt
     2521 tcgacgccca tctacgaggt gcatgctgtc aaatacgccc atctgccgcg caaggcttgg
     2581 gaagtgcaga tcactccgga cccgcacgac gccgacttcc cgatggacta tttcgtctgg
     2641 gcggcgatcc cgctcgacga gagcggccat cgcacgatcg gcggcaagcc gatcgtgatc
     2701 gacaccggct tcaacgccgc ggtcggcaag aagcgcggcc gcgaggtcaa gaccaatccc
     2761 gccgacctgc tcggccatct cgacatcgac gccacggagg tcgaggacgt catcatcacc
     2821 catctgcatt acgaccatgt cggcaactgg gaccgcttcc ccaaggcgcg cttccatctg
     2881 caggacaagg agatgcagtt cgccaccggc cggcatgtgt gccacggcac gttccgccac
     2941 gccttcgaga tcgagga
//
LOCUS       DASWGA010000905         2538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_346054, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000905 DASWGA010000000
VERSION     DASWGA010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346054"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VF991_20935"
     CDS             <1..572
                     /locus_tag="VF991_20935"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HEX9558972.1"
                     /translation="ITITITAFGRVPRGRGLTRAGARAGDRLWVSGTIGDGALGLLAA
                     RGRIDSAFLEDRFRRPRPRTTLGPRLVGIASAAADVSDGLLADSGHIGEASRLGVVIK
                     RDRVPVSVAARRTLAAEPALWANVLGGGDDYELVIAVPPRKRTALLAAARAADVPVTE
                     IGHFERGRGVQLMVAGRPARAPRQGYVHF"
     gene            651..1880
                     /locus_tag="VF991_20940"
     CDS             651..1880
                     /locus_tag="VF991_20940"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9558973.1"
                     /translation="MDGSIKLGETAAASGAMPPRALRNIALLAICQALTQSSNTLMFA
                     SSALAVLTIVSPDMRMWANLPVTMQHLGVMLSVFPASMLMMRRGRKVGFRSGSAMGMV
                     GASCAALGLGLGSFPVMCLGGLLLGYGIASMQLYRFAAVELAPGHFRAQAISYVTAGG
                     VLAGIIGPSLARFTPDLWLPTFQASFCAVIVVHAVVFVVLGFIEFPTVKTEDSTGPQR
                     PLIEIVTQPAYMVAAAGAIIAFGVMSFVMAASPLAIVMCGLDKTEAPVTIFVHVMGMF
                     VPAFFTGHLIARHGVFNTMMAGIALLIAGVIVALMGVTEWHFRIALCLNGVGWNFLFV
                     GATTLLTTTYRPTERGKAQAFNDFMVFGTTTVASLMASVVLELEGWAVLNYLALALVL
                     VAFLVIGLFRLRHPAGA"
     gene            2037..>2538
                     /locus_tag="VF991_20945"
     CDS             2037..>2538
                     /locus_tag="VF991_20945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HEX9558974.1"
                     /translation="MSTVLWAVVACGVIAVLYGVVTASRVMAADAGTPRMQEIAQAIQ
                     EGAGAYLRRQYTTIAIVGVVVLVVLAILLGKYSAVGFLIGAVLSGATGFIGMNVSVRA
                     NVRTAVAAQKSLGAGLALAFQAGAVTGMLVAGLALLGVAGYYGVLLNIGVPNGSRDMI
                     DAMVSLG"
BASE COUNT          325 a          866 c          881 g          466 t
ORIGIN      
        1 cgatcaccat taccatcacc gccttcggcc gcgtgccgcg cggccgcggc ctgacgcggg
       61 ccggtgcgcg cgcgggtgat cggctgtggg tgagcggcac gatcggcgac ggcgccttgg
      121 gcctgctcgc cgcgcgcggg cggatcgaca gtgcgtttct ggaagaccgg ttcaggcgac
      181 cgcggccgcg cacgaccctg gggcctcgcc tggtcggcat cgcctcggcg gcggccgatg
      241 tttccgacgg gctgctggcc gactcggggc acatcggcga ggcctcgcga cttggcgtgg
      301 tgatcaaacg cgaccgcgtg ccggtgtcgg tcgcggcgcg ccggacactc gccgccgaac
      361 cggcgctgtg ggccaacgtc ttgggcggcg gcgacgacta cgaactggtg atcgcggtgc
      421 cgccgcgcaa gcggaccgcc ttgctcgcgg cggcgcgtgc agccgatgtg ccggtgacgg
      481 agatcggcca tttcgaacgc gggcggggcg tgcagctgat ggtcgccggt cgaccggcgc
      541 gcgcaccgcg ccagggttac gttcacttct gagtcgcgcg tccttcgcgc atctgaatcg
      601 cgccaccgga gtggcgcgcg cccggcacgg gcgactagag tgcgcgccca atggacggct
      661 cgatcaagct gggggaaacg gcggcagcat ccggcgccat gccgccgcgc gcgctgcgca
      721 acatcgcact gctggcgatc tgccaggcgc tgacccagag cagcaacacc ctgatgttcg
      781 cctcctcggc gctggcggtg ctgaccatcg tgtcgcccga catgcggatg tgggccaacc
      841 tgccggtcac catgcagcat ctcggcgtca tgctgtcggt gtttcccgcc tcgatgctga
      901 tgatgcggcg cggccgcaag gtcggtttcc gctcgggctc ggcgatgggc atggtcggcg
      961 cctcgtgcgc cgcgcttggg ctcgggctgg gcagctttcc ggtgatgtgc ctgggcgggc
     1021 tattgctggg ctacggcatc gccagcatgc agctctaccg cttcgccgcc gtcgaactgg
     1081 cacccggcca tttccgcgcc caggcgatct cctacgtgac ggcgggcggc gtgctggccg
     1141 gcatcatcgg ccccagcctg gcgcgcttca cgcccgatct ctggctgccg accttccagg
     1201 cgagcttctg cgccgtcatc gtcgtccacg ccgtcgtctt cgtcgtgctg ggcttcatcg
     1261 agttcccgac ggtgaagacg gaagactcga ccggcccgca gcgtccgctg atcgagatcg
     1321 tcacccagcc ggcctacatg gtggctgccg ccggcgccat catcgccttc ggcgtgatgt
     1381 cgttcgtgat ggcggcgtcg ccgctcgcca tcgtgatgtg cggcctcgac aagaccgaag
     1441 cgccggtcac gatcttcgtc catgtcatgg gcatgttcgt gccggccttc ttcaccggcc
     1501 acctgatcgc ccgccatggc gtgttcaaca cgatgatggc gggcattgcg ctgttgattg
     1561 ccggtgtgat cgtggccttg atgggcgtca ccgagtggca cttccgcatc gcgctttgcc
     1621 tgaacggcgt cggctggaac ttcctgttcg tcggcgccac gaccctgctc accaccacct
     1681 accggccgac cgagcgcggc aaggcccagg ccttcaacga tttcatggtg ttcggcacga
     1741 ccacggtggc gagcctgatg gcgagcgtcg tgctggagct cgagggctgg gccgtcctca
     1801 actacctggc gctggccctg gtgctcgtgg cgttcctggt gatcggcctg ttccggctgc
     1861 gccatccggc cggcgcctga ggcccaagcc tttgaggaaa cggggctttt cccaggtccg
     1921 ggttgcgaag attgaggcgt tctgccattt tccgcccgcc tcgcgccggg ggaggtcctg
     1981 tacttcggca aagcgccagg cttttgaacg ccgttaaaac aataggttag ccaaaaatgt
     2041 ctaccgttct ttgggccgtc gtcgcttgcg gtgtcatcgc cgtgctgtac ggcgtcgtca
     2101 ccgcatcgcg ggtcatggcc gccgacgccg gcaccccgcg catgcaggag atcgcgcagg
     2161 cgatacaaga gggcgccggc gcctatctgc gccgccagta caccaccatc gccatcgtcg
     2221 gcgtggtcgt gctcgtggtg ctcgccatcc tgctcggcaa atattccgcc gtcggcttcc
     2281 tgatcggcgc ggtgctgtcc ggcgcgacgg gcttcatcgg catgaacgtg tcggtgcgcg
     2341 ccaacgtgcg cacggcggtg gcggcgcaga agagcctggg cgcaggcctc gcccttgcct
     2401 tccaggcggg cgcggtcacc ggcatgctgg tggcgggcct cgcgctgctg ggcgtcgccg
     2461 gctactacgg cgtgctgctc aatatcggcg tgccgaacgg cagccgcgac atgatcgatg
     2521 cgatggtctc gctgggct
//
LOCUS       DASWGA010000906         1651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_227375, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000906 DASWGA010000000
VERSION     DASWGA010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227375"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VF991_20950"
     CDS             <1..273
                     /locus_tag="VF991_20950"
                     /inference="COORDINATES: protein motif:HMM:NF013773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558975.1"
                     /translation="VTRRHFAARGVQAECVKLSGAMELAPSLGLSHRIVDLVDSGRTL
                     KDNGLVEIEHIADITSRFIVNRAALKTQPERIGHWIDRFREISRAA"
     gene            263..1570
                     /gene="hisD"
                     /locus_tag="VF991_20955"
     CDS             263..1570
                     /gene="hisD"
                     /locus_tag="VF991_20955"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX9558976.1"
                     /translation="MPPKRLDASAPGFEKEFSAFLGRNRDTDENVDRVVADIVADVRA
                     RGDAALVEYTRKFDRVETDAAGLRIADAERKSAAATVPAAQREALAFAAQRIEAFHRA
                     LLPQDVDFTDSTGTRLGARYRPIDSVGVYVPGGTAAYPSSVLMNVVPAKVAGVPRVVM
                     VVPTPDGVINPLVMLAAEIAGADEVWRIGGAQAVAALAYGTQSIKPVDKITGPGNAYV
                     AAAKRRVFGQVGIDLIAGPSEILVVADNRNDPAWIAADLLSQAEHDVSSQSVLLADDR
                     AFADAVARAVDDELKTTARRDIAAASWRDNGAIILVPDVAACAPIVDRIAAEHVELAM
                     ETAAAEVLADKIRHAGAIFLGRHTPEAIGDYVAGTNHVLPTSRAARFSGGLGVADFMK
                     RTSLVACTPDALAALAPAALALAHAEGLGAHGRSISIRLNRRG"
BASE COUNT          245 a          600 c          564 g          242 t
ORIGIN      
        1 gtgacgcgcc gccacttcgc cgcgcgcggc gtgcaggccg agtgcgtgaa gctgtcgggc
       61 gccatggagc tggcgccgtc gctggggctc agccaccgca tcgtcgacct cgtcgattcg
      121 ggccgcacgc tcaaggacaa cggcctggtc gaaatcgagc acatcgccga catcacctcg
      181 cgcttcatcg tcaaccgcgc cgcgctcaag acgcagccgg agcggatcgg tcactggatc
      241 gaccgcttcc gcgagatctc ccgtgccgcc taaaaggctc gatgcctcgg cgccgggctt
      301 cgaaaaggaa ttctcggcct tcctcgggcg caatcgggac accgacgaga acgtcgaccg
      361 agtcgtggcc gacatcgtgg ccgatgtgcg cgcccgcggc gatgccgctc tcgtcgaata
      421 caccaggaag ttcgacaggg tcgagaccga cgctgcggga ctgcgcatcg ccgacgccga
      481 acgcaagtca gcggcggcga cggtgccggc ggcgcaacgc gaggcgctgg cgtttgccgc
      541 gcagcgcatc gaggcgtttc accgcgcgtt gctgccccag gacgtcgact tcaccgactc
      601 aaccggcacg cggctgggcg cgcgctatcg gccgatcgac tcggtcggcg tctatgtgcc
      661 gggcggcacg gcggcctatc cgtcgtcggt gctgatgaac gtcgtgccgg ccaaggtggc
      721 gggcgtgccg cgcgtcgtca tggtcgtgcc gacgccggac ggcgtcataa acccgctggt
      781 catgctggcg gccgagatcg ccggcgccga cgaggtctgg cgtatcggcg gcgcccaggc
      841 cgtggcggcg ctggcctatg gcacgcagtc gatcaagccg gtcgacaaga tcaccggccc
      901 gggcaacgcc tatgtcgccg ccgccaagcg ccgcgtcttc ggccaggtcg gcatcgacct
      961 gatcgccggc ccctcggaga tcctggtcgt ggccgacaac aggaacgatc cggcctggat
     1021 cgccgccgac ctgttgtccc aggccgagca cgacgtctcc tcgcagtcgg tgcttttagc
     1081 cgacgatcga gccttcgccg acgccgtggc gcgcgccgtg gacgacgaac tcaagaccac
     1141 ggcgcggcgc gacatcgccg ctgcaagctg gcgcgacaac ggcgccatca tcctggtgcc
     1201 ggacgtcgcc gcttgcgccc ccatcgtcga tcgcatcgcc gccgagcatg tcgagctggc
     1261 gatggagacc gctgccgccg aggtgctggc cgacaagata cgccatgccg gggcgatttt
     1321 cctcggccgc catacgccgg aggcgatcgg cgactacgtc gccggcacca accacgtcct
     1381 gccgacgtcg cgcgcggcgc gcttctcggg cgggcttggc gtcgccgact tcatgaagcg
     1441 cacgtcgttg gtcgcctgca cgcccgacgc gctggccgcc ctggcccccg cggccctggc
     1501 gctcgcccac gccgagggcc tgggcgcgca tggccggtcg atctcgatcc ggctcaaccg
     1561 ccgcggctga cacggccatg ccgcaacggc gttgcatcgt cgacatcgtg ctggacgaag
     1621 actccgtcgc gcgccgcacg ccggaagtcg a
//
LOCUS       DASWGA010000907         1709 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2006738, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000907 DASWGA010000000
VERSION     DASWGA010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2006738"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1635
                     /locus_tag="VF991_20960"
     CDS             <1..1635
                     /locus_tag="VF991_20960"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX9558977.1"
                     /translation="MRAMGLDDAAIAKPMVGVVSMKGEQTPCNMTHGFQVDAAKEGIA
                     EAGGTPREFTTISMSDGIGMNHEGMKFSLVTRELIADSIEAVVHGLAYDGLVGFGGCD
                     KTLPGVMMGMVRCNVPAVFVYGGSALPGHFAGRDVTILDSYEAVGAVMTGDMDEASLA
                     LLERACLPTVGACAGQFTANTMAMVSEALGLSVPNVSMIPGVYAARAAYARRAGALVM
                     AAIERGGPLPRDIVTRAALGNACAVVAATGGSTNAALHIPAIAHEAGIAFDIDDVGRV
                     FERTPLIADLRPGGRFTAKHVHEIGGTAVILRALLDGGYLDGDCLTVTGETIAQVYGD
                     AAALDGTVVRAATAPLMPDGGLAVLKGNLCPDGALLKIAGLKTLVHEGPARVFECEED
                     CARVVEARAYQTGEVLIIRNEGPVGGPGMQEMLGVTALIYGQQMGEKVALVTDGRFSG
                     ATHGICVGYVAPEAAIGGPLALVQDGDIVRIDAVGRRMDLLVEDRVLAERRAAWRAPA
                     PRHRAGLLAKYARLVGQANKGAVTHEGGAEWPWFDR"
BASE COUNT          264 a          548 c          625 g          272 t
ORIGIN      
        1 atgcgggcga tggggctgga cgatgcggcg atcgccaagc cgatggtcgg ggtcgtcagc
       61 atgaagggcg agcagacgcc ctgcaacatg acgcacggtt ttcaggtcga tgcggccaag
      121 gaggggatcg ccgaggccgg cggcacgccg cgcgaattca ccacgatctc gatgtcggac
      181 ggcatcggga tgaaccatga gggcatgaaa ttctcgctgg tcacgcggga attgatcgcg
      241 gactcgatcg aggcggtggt tcacggcctc gcctatgacg ggcttgttgg ctttggcggc
      301 tgcgacaaga cgctgccggg cgtcatgatg gggatggtcc ggtgcaacgt gccggcggtc
      361 ttcgtctatg gcggcagcgc cctgccgggc catttcgccg gccgggatgt gacgatcctg
      421 gattcctacg aagcggtcgg cgccgtgatg accggcgaca tggacgaggc ctccttggcg
      481 ctcctcgaac gtgcctgcct gccgacggtc ggcgcctgtg ccgggcaatt caccgccaac
      541 acgatggcga tggtgtcgga ggccctcggc ctcagcgtac cgaacgtgtc gatgatcccc
      601 ggggtttatg ccgcgcgcgc cgcctatgca cggcgcgccg gcgccctggt gatggcggcg
      661 atcgagcgcg gtgggccgct gccgcgcgac atcgttacgc gagccgcgct cggaaacgcc
      721 tgcgcggtcg tcgccgcgac cggcggctcg accaatgcgg ccctgcatat cccggcgatc
      781 gcgcacgagg cgggcatcgc cttcgatatc gatgatgtgg gacgcgtctt cgagcgcacg
      841 ccgctgatcg ccgatttgcg tcccggcggg cgctttaccg ccaagcacgt gcatgagatc
      901 ggcggcaccg cggtcatcct gcgcgcgctg ctcgatggcg gctatctcga tggcgactgc
      961 ctgaccgtga ccggcgaaac gattgcgcag gtctatggcg acgccgccgc gctggacggc
     1021 acggtggtgc gtgccgcgac tgcaccgttg atgccggatg gcggcctcgc cgtgctcaag
     1081 ggcaatttgt gccccgacgg tgcgctactc aaaatcgccg ggctcaagac gctggtgcat
     1141 gaaggcccgg cgcgggtctt cgaatgcgag gaagattgcg cccgggtggt cgaagcgcgc
     1201 gcctaccaga cgggcgaggt gctgatcatc cgcaacgaag ggccggtcgg cggacccggg
     1261 atgcaggaga tgctgggtgt caccgcgctg atctacggcc agcagatggg cgagaaggtg
     1321 gcactggtca ccgacggccg gttttccggc gcgacacacg ggatctgcgt cggctatgtc
     1381 gcgccggagg cggcgatcgg cggcccgctg gcgctggtgc aagacggcga tatcgttcgc
     1441 atcgatgccg tcggccggcg catggacctg ctcgtcgagg accgcgtcct ggccgagcgc
     1501 cgggccgcct ggcgagcccc cgcgccacgg cacagggccg ggttgctggc gaaatatgcc
     1561 cgcctcgtcg gccaggcgaa caagggcgcc gtcacccacg agggtggcgc cgagtggccc
     1621 tggttcgacc gctgagcagc caaggtcgag caactcgcca tcgaccgggc agccccggct
     1681 taccggttgc gcgccgccaa caacagtaa
//
LOCUS       DASWGA010000908         7923 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1243706, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000908 DASWGA010000000
VERSION     DASWGA010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7923
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243706"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1993)
                     /gene="rpoD"
                     /locus_tag="VF991_20965"
                     /pseudo
     CDS             complement(1..1993)
                     /gene="rpoD"
                     /locus_tag="VF991_20965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387037.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
     gene            complement(2180..4066)
                     /gene="dnaG"
                     /locus_tag="VF991_20970"
     CDS             complement(2180..4066)
                     /gene="dnaG"
                     /locus_tag="VF991_20970"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEX9558978.1"
                     /translation="MAFPPGFLDELRARLSLSDIVGRKVSLKRRSGAEYAGLCPFHNE
                     KTPSFTVNDKKGFFHCFGCGVHGDAVGFVMKTEGLSFPEAVEKLAREVGLPVPRATPA
                     ERERADRIATLQQVAEEAARWFQKQLRLPVGRQGLDYLRGRGLDEATIDDFRLGFAPD
                     SRDGLLAALKREGVPVDKIVEAGLVIRPEDDREAYDRFRGRVMFPITDRRGRVIAFGG
                     RVMGAGEPKYLNSPETPLFHKGANLYCLDRARVAAIKDQPVIVAEGYMDVIALHGAGF
                     VGAVAPLGTALTEGQLGELWKLADEPYLCFDGDNAGRRAAARAAERALPLLRAGKSLR
                     FLALPAGEDPDSLIRSRGADAIRRILDLARPLSDVVWDMETEGKVADTPERRASLQRA
                     VEQRVAEIADPVVRDYYRTDMRDRFARLRRAAAPPWQPGGRRPFRGPGPEPAPFAAGA
                     AARRAGADLEGSRQERALLGALIERPALLHVLAEDLAALPIAHPELARLRSGLLDALS
                     LAPFGVDPAVDEALAEGSAENTPLEARLIEEHLERCGLGRVAASAQAKAREVFRDHPA
                     DTEGWVGQWRRAARHLSQLTADPEELKRAEQALAEDMNEENLRRLQAILDRMRRESLE
                     SGTG"
     gene            complement(4199..4660)
                     /locus_tag="VF991_20975"
     CDS             complement(4199..4660)
                     /locus_tag="VF991_20975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEX9558979.1"
                     /translation="MLRDKLNEALKDAMRARDMASVGAIRLILAKLKEVDIAARTETS
                     REGVADERILSMLQGMIKQRNESVALYEKGNRPDLADKEKAEIVVIERFLPRQMDDSA
                     VEAAVREAVAAAGAKTVKDMGGVMAALKAKYAGQMDFAKASAAVKRALTSS"
     gene            4862..6046
                     /gene="carA"
                     /locus_tag="VF991_20980"
     CDS             4862..6046
                     /gene="carA"
                     /locus_tag="VF991_20980"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEX9558980.1"
                     /translation="MTSPKTAGATDAAPRWATAALVLGDGAVFWGKGVGAPRHAVGEV
                     CFNTSMTGYQEIITDPSYAGQIITFTFPHIGNVGTNLEDIESINPAARGVVLRGDITE
                     PANWRAAKPLDDWLRSHNLPGICGVDTRAITRRIRDGGAPNGVVVHAPDGKFDIAKLH
                     QLAEAWPGLDGMDLAVEVTTKQTYNWDETKWALGKGYGKLAKPKYHVVAVDYGAKRNI
                     LRCLANTGCKVTVVPATATAEDILRHKPDGVFLSNGPGDPAATAGYSVPAIQGVLDKK
                     VPLFGICLGHQILALTLGGKTRKMERGHRGANQPVKDLTTGKVEITSQNHGFCVVPES
                     LPDTVEVTHVSLFDGTNEGLRCTDKLAFSVQYHPEASPGPTDSHYLFDRFVEMIDKSK
                     GK"
     gene            6053..>7923
                     /gene="carB"
                     /locus_tag="VF991_20985"
     CDS             6053..>7923
                     /gene="carB"
                     /locus_tag="VF991_20985"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEX9558981.1"
                     /translation="MPKRTDIKSILVIGAGPIVIGQACEFDYSGVQACKALKEEGYRV
                     VLVNSNPATIMTDPGLADATYVEPITPDMVARIIEKERPDAILPTMGGQTALNTAMAL
                     HRDGRLKKFKVELIGANAEAIDKAEDRLLFREAMTKIGLECPKSEVVHNREEAMSAVD
                     HVGLPAIIRPSFTLGGTGGGIAYNRDEYFDIVQGGIDASPVGEVLVEESVLGWKEYEM
                     EVVRDRRDNCIVICSIENIDPMGIHTGDSVTVAPALTLTDKEYQIMRDASIACLREIG
                     VDTGGSNVQFAVDPASGRMVVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDE
                     LLNDITGTTPASFEPTIDYVVTKMPRFAFEKFPGAEALLTTSMKSVGEAMSIGRTFQE
                     SLQKALRSMETGLTGLNEIDIMGAPEKTAVVGALSRATPDRILVIAQAFRFGLSVDEV
                     AHACKYEPWFLRQIEQLVKIEAEVRDHGLPKDAKGLLDLKKKGFSDERLAELTGQSAA
                     DVARKRRGLGIRPVFKRIDTCAAEFESHTPYLYSCYEGDGLHSAECEARPTGRRKVII
                     LGGGPNRIGQGIEFDYCCVHAVYALREAGYETIMVNCNPETVSTDYDTADRLYFEPLT
                     "
BASE COUNT         1269 a         2670 c         2616 g         1368 t
ORIGIN      
        1 gcatgcgcga gcggctgggg tgcttcagct tgcgtaacgc cttggcctcg atctggcgga
       61 tgcgctcgcg ggtcaccgag aactgctggc cgacctcttc caaggtgtgg tcggtgttca
      121 tgccgatgcc gaagcgcatg cgcagcacgc gctcctcgcg cggcgtgagg gtggccagca
      181 cccgggtggt gctctcgcgc aggttgccct ggatcgcggc ttccagcggg atcaccgcgt
      241 tcgggtcctg gatgaagtcg ccgagatggg aatcctcctc gtcgccgatc ggcgtctcga
      301 ggctgatcgg ctccttggcg atcttcagca ccttgcgcac cttctcgagc ggcatgccga
      361 gcttctcggc cagctcctcg ggctgcggct cgcggccgat ctcgtgcagc atctggcggc
      421 tggtgcggac cagcttgttg atggtctcga tcatgtgcac cgggatgcgg atggtgcgcg
      481 cctggtcggc gatcgagcgc gtgatggcct ggcggatcca ccacgtggcg taggtcgaga
      541 acttgtagcc gcggcggtac tcgaacttgt cgaccgcctt catcaggccg atgttgcctt
      601 cctggatcag gtcgaggaac tgcaggccgc ggttggtgta cttcttggcg atggagatca
      661 ccagccgcag gttggcctcg atcatctcct tcttggcgcg catcatctcg cgctcgccgt
      721 cctgcacggt cttgcacatg cggcggaatt cgaagatcgg tgcgcccgag gcttcggaga
      781 tcgccttgat ctcggcgcgg atctactcga cgtcgaccat cttcttcttg gcgaagtcct
      841 tccagccccg gcccgacagc ttgccgacct tgtcgagcca gttcggatcg atctcgtggg
      901 tcaggtagtt gtcgaggaag tcctggcgcg ggatgcggaa gccctcggcc agcctgagca
      961 gcctgccttc gagcatcatc agcttgcgat tgaggtcgta gagcgcaagc ttcagctgct
     1021 cgatgcgatg ggcattgatg tgcaccgtac gcaccagctc gacgatcttc ttgcggtgct
     1081 tctcgtagct cttctcgaat tccgcgctgg gcttctggcc gcggctcaag gtcgacaggc
     1141 gccggttctg caccttcgac atctcgacat agaccttggc gatgcgcgtc agcgtgcgca
     1201 gcacctcggg cttgagcttc tcctcgagcg ccgacagcga cagcgcgttc tcgtcgtcgt
     1261 cctcgccgcc ttcggtggct gcgacttcgc ctgcctcgcc gttcaccgcc ggcgctggcg
     1321 ccggcgccgg ccgcaccagc ttgggcggcg ccggccgcgg catcggcgga gcgcccggga
     1381 ccggcgccgc gatgacgccc ttgccttcgc cgggggcgcc gccctgcgtc gcctcgaggt
     1441 cgatcacgtc gcgcagcagg atgcggcctt cattgatcgc gtcgcgccag gccagcagcg
     1501 ccgtgatcgt catcgggctc tcgcagatgc cgccgatcat cttgtcctgg ccggcttcga
     1561 tgcgcttggc gatctcgatc tcgccctcgc ggctcagaag ctcgacgctg cccatctcgc
     1621 gcaaatacat gcgcacgggg tcgtcggtgc ggccgagttc ctcgtcctcg ccggtcgctt
     1681 cggcggcgac cacggcggtc ttggccggct cggccggggt ggcggcgggg gcttcttcct
     1741 gttcttcggc ctcgatgacg ttgacgccgg cttccgacag catcgccatg gtgtcctcga
     1801 tctgctcgga ggacacttcg tcgggcggca gggcggcgtt cagctcgtcg taggtaacgt
     1861 agccgcgctc cttgcccttc tggacgagct tcttcagctc ggcgcccagg gtgtcgagca
     1921 acggggcgtc gggcccctct tcgcgggcgt cggtggcttc gggctgggcg gcgggggcgg
     1981 tcttggtcgc cattctttat ccttggctgt acaaacgaat aaaacggccg gttttggccg
     2041 tggttcaagc tgcaagaagg ggaggcggag agggcggccc cgctaactac ccttctacta
     2101 tatggggctt aagttcaagc tgcgataggg gttacagggc tgattcggcg gcactccgcc
     2161 taattcggcg gcactccggc tagcccgtcc cggattcgag gctttcccgc cgcattcggt
     2221 ccagaattgc ctgcaagcga cgcaaattct cctcattcat gtcctcggcc agggcctgtt
     2281 cggcccgttt cagctcctcg ggatcggccg tcaactggct gagatggcgg gcggcccgcc
     2341 gccactgacc gacccagccc tcggtatcgg ccggatggtc gcggaacacc tcccgggcct
     2401 tggcctgggc tgaagccgcc acgcggccca gtccgcagcg ctccaggtgt tcctcgatca
     2461 gccgggcttc aagaggggta ttttccgcgc tgccctcggc cagcgcctcg tcgaccgccg
     2521 gatcgacccc gaagggggcc agtgagagcg cgtccaaaag gccgctgcgc aggcgggcaa
     2581 gttcgggatg ggcgatcggc aaggccgcca gatcctcggc cagaacgtgc agcagggccg
     2641 gccgctcgat cagggcgccc agcagagccc gctcctggcg cgagccctcg agatcggcac
     2701 cggcacgccg ggctgcggcg cctgcggcaa agggcgcggg ctcggggccg ggcccgcgaa
     2761 acggccgccg tccgccgggc tgccaaggcg gcgccgcggc acgcctgagg cgggcgaacc
     2821 ggtcgcgcat gtcggtccgg taatagtcgc gaacgaccgg atcggcgatc tcggccactc
     2881 gctgctcgac ggcgcgctgc aggctggcgc ggcgctccgg cgtgtcggcg accttgcctt
     2941 cggtctccat gtcccacacc acgtcagaca gcggacgggc gagatcgagg atgcggcgga
     3001 tggcgtcggc accgcggcta cggatcaggc tgtcgggatc ctcgccggcc ggcagggcga
     3061 gaaaacgcag gctcttgccg gcgcgcaata gcggcaacgc gcgctcggcg gcgcgggccg
     3121 ccgcgcgccg tccggcattg tcgccgtcga agcatagata cggttcgtcg gcgagtttcc
     3181 acagttcgcc gagctggccc tcggtcagcg ccgtgccgag gggggccacc gcgccgacga
     3241 aacccgcgcc atgcagcgcg atgacgtcca tgtagccctc ggccacgatc accggctggt
     3301 ccttgatcgc cgccacgcgg gcgcggtcga ggcaatagag attggcaccc ttgtgaaaca
     3361 gcggcgtctc gggcgagttg agatacttgg gctcgcccgc gcccatcacg cgcccgccga
     3421 aggcgatcac ccggccgcgg cggtcggtga tgggaaacat cacgcggccg cggaaccggt
     3481 cgtaggcctc gcgatcgtcc tcgggccgga tgacgaggcc tgcttcaacg atcttgtcga
     3541 ccggcacgcc ttcacgtttc agcgcggcca aaagcccgtc gcgtgaatcg ggggcgaagc
     3601 ccaggcggaa atcgtcgatg gtcgcctcgt cgaggccgcg gccgcgcaaa tagtccaggc
     3661 cctgccgtcc gaccggcagg cgaagctgct tctggaacca gcgcgcggcc tcctcggcga
     3721 cctgctgcag ggtggcgatg cggtcggcgc gctcgcgttc ggcgggcgtg gcgcgcggca
     3781 ccggcaggcc aacctcgcgc gcgagcttct ctaccgcttc ggggaaggac aggccctcgg
     3841 tcttcatgac gaagcccacg gcgtcgccgt gcacgccgca gccgaagcag tggaagaagc
     3901 ccttcttgtc gttgacggtg aaggacggcg tcttctcgtt gtggaacggg cagaggccgg
     3961 catactccgc gcccgagcgg cgcttcagcg agaccttgcg gccgacgata tcggacaggc
     4021 tgaggcgcgc gcgcagttcg tcgaggaagc ccggggggaa ggccatcgcc ttaaaatgac
     4081 gatcagactc gagatgcgcc agagacggga cagaggatag cggggacttt cctgtcatcc
     4141 tgagcgtagc gaaggatctc atcgccgctt gctaccggca tgagatcctt cgctacgctc
     4201 aggatgacgt aagtgctctc tttaccgccg ccgaggcctt ggcaaaatcc atctggccgg
     4261 catatttggc tttcagcgcc gccatcacgc cgcccatgtc cttgaccgtc ttggcgccgg
     4321 ccgccgccac cgcctcacgg acggcggcct cgaccgctga atcgtccatt tgccggggca
     4381 ggaaacgctc gatgacgacg atctcggcct tttccttgtc ggcgaggtcg gggcggttgc
     4441 ctttctcgta gagggcgacc gattcattgc gctgtttgat catgccctgc agcatcgaca
     4501 ggatgcgctc gtcggccacg ccctcgcggc tggtttcggt gcgagcggcg atgtcgactt
     4561 ccttgagctt ggccaggatc aggcgaatgg cgccgaccga cgccatgtcg cgggcgcgca
     4621 tggcatcctt cagcgcctcg ttcagtttgt cgcgcagcat ggtctttgtc ccgatcgatc
     4681 gaaggccgga aactaatcgc ccggcgcgct gttggcaaag caaataagct attgaaaaag
     4741 ctcataaatt agcagttcgc agcaccttga ccccctgcga ccgcttggtt acaacgccgc
     4801 gcggcttgcc ggtcgcctct ccgggcgggg tcggcgggcc gtacgaacgg gcaaattcag
     4861 catgacctct ccgaagaccg ccggcgcgac tgacgccgcg ccgcgttggg ccacggccgc
     4921 cctggtgctg ggcgatggcg cggtcttttg gggcaagggc gtgggcgcgc cgcgccatgc
     4981 ggtgggcgag gtgtgcttca acacctcgat gaccggctat caggagatca tcaccgatcc
     5041 ctcctatgcc ggccagatca tcaccttcac ctttccgcac atcggcaacg tcggcaccaa
     5101 tctcgaggat atcgagagca tcaatcctgc cgcgcgcgga gtcgtgctgc gcggcgacat
     5161 caccgagcct gccaactggc gcgccgccaa gccgctcgac gactggctgc ggagccacaa
     5221 tctgcccggc atctgcggtg tcgacacgcg ggcgatcacg cggcgtatcc gcgacggcgg
     5281 cgcgcccaac ggcgtggtcg tgcacgcgcc ggacggcaag ttcgacattg ccaagctgca
     5341 ccagctcgcc gaggcgtggc ccggcctcga cggcatggat ctcgccgtcg aagtcaccac
     5401 caagcagacc tacaattggg acgagaccaa gtgggcgctg ggcaagggct acggcaagct
     5461 cgccaagccc aagtaccatg tcgtcgccgt ggactacggc gccaagcgca acatcctgcg
     5521 ctgcctcgcc aataccggct gcaaggtcac ggtcgttccg gcgaccgcca cggccgagga
     5581 tatcctgcgc cacaagcccg acggcgtgtt cctgtccaac ggtcccggcg atccggcggc
     5641 gacggcgggc tacagcgtgc ccgccatcca gggcgtgctc gacaagaagg tgccgctgtt
     5701 cggcatttgc ctcggccacc agatcctggc gctcacgctt ggcggcaaga cgcgcaagat
     5761 ggagcgcggc caccgcggcg ccaatcagcc agtcaaggac ctgaccaccg gcaaggtcga
     5821 gatcacctcg cagaaccatg gcttttgcgt cgttcccgaa tcgctgcccg acactgtcga
     5881 ggtgacccac gtctcgctgt tcgacggcac caacgaaggc ctgcgctgca ccgacaagct
     5941 ggccttttcg gtgcagtacc atcccgaagc ctcgcccggc ccgaccgaca gccactacct
     6001 cttcgaccgc ttcgtcgaga tgatcgacaa gagcaagggc aaataggccg gcatgcccaa
     6061 gcgcaccgac atcaagagca ttctggtcat tggcgccggc cccatcgtga tcggccaggc
     6121 ctgcgagttc gactattccg gcgtgcaggc ctgcaaggcg ctgaaggagg agggttatcg
     6181 cgtcgtcctg gtgaactcca acccggccac gatcatgacc gatcccggcc tggccgacgc
     6241 cacctatgtc gagccgatca cgcccgacat ggtcgccagg atcatcgaga aggagcggcc
     6301 cgacgccatc ctgccgacca tgggcggaca gaccgcgctc aacacggcga tggcgctgca
     6361 tcgcgacggc cgtctcaaga agttcaaggt cgagctgatc ggcgccaacg ccgaggcgat
     6421 cgacaaggcc gaggatcgcc tgctgttccg cgaggccatg accaagatcg gcctggagtg
     6481 ccccaagagc gaggtcgtgc acaaccgcga ggaggcgatg agcgcggtcg accatgtcgg
     6541 cctgcccgcc atcatccggc cgtccttcac cctgggcggc accggcggcg gcatcgccta
     6601 caatcgcgac gaatatttcg acatcgtgca gggcggcatc gacgcctcgc cggtcggcga
     6661 ggtgctggtc gaggaatcgg tgctcggctg gaaagaatac gagatggagg tggtgcgcga
     6721 ccgccgtgac aactgcatcg tcatctgctc gatcgagaac atcgatccga tggggattca
     6781 cactggcgat tcggtgacgg tggcgccggc gctgacgctg accgacaagg aataccagat
     6841 catgcgcgac gcctcgatcg cgtgcctgcg cgagatcggc gtcgataccg gcggttcgaa
     6901 cgtgcagttc gcggtcgatc ccgcgagcgg ccgcatggtg gtgatcgaga tgaacccgcg
     6961 cgtgtcgcgc tcctcggcgc tggcgtcgaa ggccaccggc ttcccgatcg ccaaggtcgc
     7021 ggcgcggctc gccgtcggct acacgctcga cgagcttttg aacgacatca ccggcacgac
     7081 ccccgcctcg ttcgaaccga ccatcgacta cgtcgtcacc aagatgccgc gcttcgcctt
     7141 cgagaaattc cccggcgcgg aggcgctgct cacgacctcg atgaagagcg tgggcgaggc
     7201 gatgtcgatc gggcggacct tccaggagtc cttgcagaag gcgctgcgct cgatggagac
     7261 gggcctgacc gggctgaacg aaatcgacat catgggcgcg cccgaaaaga ccgccgtcgt
     7321 cggcgccttg tcacgggcca cgcccgatcg catcctggtg atcgcccagg ccttccgttt
     7381 cggcctctcg gtcgacgagg tggcccatgc ctgcaagtac gagccgtggt tcctccgcca
     7441 gatcgaacag ctggtgaaga tcgaggcgga agtccgcgac catggcctgc ccaaggacgc
     7501 caagggcctg ctcgacctca agaagaaggg cttttccgac gagcgcctgg ccgagctcac
     7561 tggccagtcg gccgccgatg tcgccaggaa gcggcgcggc ctcggcatcc ggccggtgtt
     7621 caagcgcatc gacacctgcg ccgccgagtt cgaatcgcac acgccctatc tctactcctg
     7681 ctacgagggc gacggcctgc attccgccga atgcgaggcc cggccgaccg gtcgccgcaa
     7741 ggtcatcatc ctgggtggcg ggcccaaccg catcggccag ggcatcgagt tcgactattg
     7801 ctgcgtgcac gccgtctacg ccctgcgcga ggccggctac gagaccatca tggtcaactg
     7861 caatcccgag acggtgtcga ccgactacga caccgccgac cggctctact tcgaaccgct
     7921 gac
//
LOCUS       DASWGA010000909         3962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1503937, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000909 DASWGA010000000
VERSION     DASWGA010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3962
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1503937"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VF991_20990"
     CDS             <1..189
                     /locus_tag="VF991_20990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558982.1"
                     /translation="FVLAFTLARMVYGATEAAMHLGMSMGLREMVVALVACMIMTVVS
                     SLFAIRRLWKVDPIMLFE"
     gene            192..911
                     /locus_tag="VF991_20995"
     CDS             192..911
                     /locus_tag="VF991_20995"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9558983.1"
                     /translation="MSTDNPHNFGPPVVEAIDVHHHYGEGPQRADVLFDINMQVREGE
                     LLIVTGPSGSGKTTLLTILGTMRRPSEGKLRLLGSDLFGLGGRELDILRNRVRFLFQK
                     RNLLSSLTALQNVMAGVSTTPLSDPAWDEPRARHLLSLLGLTDKADAWPDELSGGQQQ
                     RVAIARVMIGLPDLIIADEPTSALDRVAGRLVVDQLKDLAMRAKCAVVLSTHDERIFD
                     VASRRLHIEDGRCFEVPIHYH"
     gene            925..2169
                     /locus_tag="VF991_21000"
     CDS             925..2169
                     /locus_tag="VF991_21000"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX9558984.1"
                     /translation="MLLSAIDFVVFLSLAVQFAIAGYFLYLVYWLIEMAPAEAVPPAL
                     PEELPRVLVQIPVYNEPLVVERALVAAGALDWPHELLTIQLLDDSTDITTDIAVHAVA
                     RLKRDGVDVVHVRRADRSGFKAGALAAGLAVSDAPYVAVFDADFVPPSAWLRGAMAAI
                     LAEPKAAFVQTRIEWGNGERNWLTRAQRLMQDAHFAVEQDIRARRGVPFQFNGTGGIW
                     RRAAVEEAGGWSHDTLSEDLDLVLRTYLKGWRGVFLMEPHVVGELPSKLDDFSAQQGR
                     WSKGFMQVARKLLGPIWAADWPAEAKLTTTVALGQQLIFPVLAVGIVALILSVIGHGH
                     LLGFFRFLLWLWFIVLLAVLFGMTWGAYRRLRRGDLVRYLVTAASIPALIVYLAAANA
                     GAIIGAGLGRKTEFNRTPKTGT"
     gene            2174..3472
                     /locus_tag="VF991_21005"
     CDS             2174..3472
                     /locus_tag="VF991_21005"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9558985.1"
                     /translation="MALSAALALLFAAIFAVCCGLLAAFVGSLLYMVVLHHRLKESGL
                     RREAALLATRLPPDSELPHVVVQIPSFNEGGVLRRGVEAAARLDWPRDKLHIQVLDDS
                     TDETAQLARTVVAELSAQGHDIAALQRTDRSGFKGGALHEAMQRTPHDYFAIFDVDYV
                     PSPDFLRVCMRPFFANPRWAFVQARFDFLNPHDNALTEMQMVTLDAHLGIEQATRCWA
                     GHPLPFNGTCGIWQRAAIEAGGGWKGDTVTEDLDLTYRGWVKGWRALFLTSVAVPGEL
                     PADTKTWLRQQQRWQDGFRHVSLRMVPAILRSGDITPSSKAAALLHLCMSLNQPVLLV
                     GVVSGLVAAVLAPSLIALLLTLFLLTLAWVLFCAATFLRAGHNFIRGGAMSPMRFTLV
                     LLRFVGGQLAVLVRSLAVHLAKLLNRPKPIVFDRTPKRGA"
     gene            complement(3469..>3962)
                     /locus_tag="VF991_21010"
     CDS             complement(3469..>3962)
                     /locus_tag="VF991_21010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="amidinotransferase"
                     /protein_id="HEX9558986.1"
                     /translation="ACVDGPFLEGGDTLLNGYEIYVGISGCASDLAGADWLQALLGEK
                     YRVIPVAMRSNVLHLDCALALIKPGLLVYCPEKLIDGLPMSLRGWDKIAVATDEANRL
                     ATNALVLEEGRVIVDTDNGRVIEELRQRKIDVIALPFDGPISIGGGLRCAHHPLLRES
                     VLA"
BASE COUNT          553 a         1396 c         1312 g          701 t
ORIGIN      
        1 ttcgtgctgg ccttcacgct ggcccgcatg gtctacggcg ccaccgaagc ggccatgcat
       61 ctcggcatgt cgatgggcct gcgcgagatg gtggtggcac tggtcgcctg catgatcatg
      121 accgtggtgt cgagcctgtt cgcgatccgc cggctgtgga aggtcgaccc catcatgctg
      181 ttcgagtgac catgtcgacc gacaatcctc acaacttcgg accaccagtc gtcgaggcga
      241 tcgacgtcca tcaccactac ggcgaagggc cgcagcgggc cgacgtgctg ttcgacatca
      301 acatgcaggt ccgcgagggc gagctgctga tcgtcaccgg accgtccggt tcgggaaaga
      361 cgacgctgct caccatcctc ggcaccatgc gccgcccgtc cgaaggcaag ctccgcctgc
      421 tcggtagcga ccttttcggc ttgggcggga gagagctcga tatcctgcgc aatcgcgtgc
      481 ggttcctgtt ccagaagcgc aaccttctgt cgtcgctgac ggcgctgcag aacgtcatgg
      541 ccggcgtctc gactacgccg ctgtcggacc cggcctggga cgagccgcgc gcgcgccact
      601 tgctgagcct gctcggcctt accgacaagg ccgacgcctg gccggacgag ctgtccggcg
      661 gccagcagca gcgcgtcgcc atcgctcgcg tcatgatcgg gctgcccgac ctcatcatcg
      721 ccgatgagcc gacgtcggcg ctcgaccgcg tcgccggccg gctggtggtc gatcagctga
      781 aggacctcgc tatgcgcgcc aagtgcgccg tcgtgctgtc gacccacgat gagcgcatct
      841 tcgatgttgc gtcgcgccgc ctccacatcg aggacggccg ctgcttcgaa gtgccgatcc
      901 actaccattg accggcggga tgtcgtgctg ctctcggcca tcgatttcgt cgtctttctc
      961 agtctggccg tgcagttcgc catcgccggc tacttcctct acctcgtcta ttggctgatc
     1021 gagatggccc cggcggaggc cgtcccgccg gcgctgcccg aggagctgcc gcgcgtgctg
     1081 gtgcagatcc cggtctacaa cgagccgctg gttgtcgagc gcgcgttggt tgccgccggc
     1141 gcactcgact ggccgcacga gctgttgacg atccaacttc tcgacgacag caccgacatc
     1201 accaccgata tcgcggtcca tgccgtggcg cggctcaagc gcgacggcgt cgacgtcgta
     1261 catgtgcggc gggccgaccg cagcggcttc aaggcggggg cgctggcggc gggcctggct
     1321 gtttcggacg cgccctatgt cgcggtgttc gacgccgact tcgtgccgcc gtccgcctgg
     1381 ctgcgcggcg ccatggcggc gatcctggcc gagccgaagg cggctttcgt gcagacgagg
     1441 atcgaatggg gcaacggcga gcgcaattgg ctgacccgcg cccagcgcct gatgcaggac
     1501 gcgcacttcg ccgtcgagca ggacatccgc gcccggcgcg gcgtgccctt ccagttcaac
     1561 ggcacgggcg gcatctggcg ccgcgccgcg gtcgaggagg ccggcggctg gtcgcatgac
     1621 accttgtcgg aggatctcga cctggtgctg cgcacctatc tcaagggctg gcgcggcgtg
     1681 ttcctgatgg agccgcacgt ggtcggcgag ctgcccagca agctcgacga tttcagcgcc
     1741 cagcagggcc gctggtcgaa gggtttcatg caggtcgcgc gcaagctgct cgggccgatc
     1801 tgggccgccg attggccggc cgaagccaag ctcacgacca ccgtggcgtt gggccagcag
     1861 ctcatctttc cggtcctggc ggtgggcatc gtggcactga tcctgtcggt gatcggccac
     1921 ggtcacctgc tgggcttctt ccgcttcctg ctgtggctgt ggttcatcgt cctgctggcc
     1981 gtgttgttcg gcatgacctg gggcgcctat cgccgcttgc ggcgcggcga tctcgtgcgc
     2041 tacctggtca cggccgcgag catccccgcc ctgatcgtct atctcgccgc ggccaacgcc
     2101 ggcgccatca ttggcgcggg cctcggccgc aagaccgaat tcaaccgcac gcccaagacg
     2161 ggcacctgag ccgatggccc tgtccgctgc cctggccctg ctgttcgccg cgatcttcgc
     2221 cgtctgctgc gggctgctcg ccgccttcgt cggcagcctg ctctatatgg tcgtgctgca
     2281 tcaccgcctg aaggagagcg ggcttcgccg cgaggcggcg ctgctggcca cgcggttgcc
     2341 gcccgactcc gagctgccgc acgtcgtggt gcagatcccg tccttcaacg agggcggcgt
     2401 gctgcggcgc ggcgtcgagg cggcggcccg gctcgattgg ccgcgcgaca agctgcacat
     2461 ccaggtcctt gacgacagca ccgacgagac tgcccaactc gcgcgcacag tcgtggccga
     2521 gctcagcgcc cagggccacg acatcgccgc cctgcagcgc accgaccgca gcggcttcaa
     2581 gggcggcgcg ctgcacgagg cgatgcagag gacgccgcac gactatttcg ccatcttcga
     2641 cgtcgactac gtgccgtcgc ctgacttcct gcgcgtctgc atgcggccgt tcttcgccaa
     2701 tccgcgctgg gccttcgtgc aggcgcggtt cgacttcctc aatccgcacg acaatgcgct
     2761 caccgagatg cagatggtga cgctcgacgc ccatctcggc atcgagcagg cgacccgctg
     2821 ctgggccggc catccgctgc cgttcaacgg cacctgcggc atctggcagc gcgccgccat
     2881 cgaggccggc ggcggctgga agggcgacac cgtcaccgag gatctcgacc tcacctatcg
     2941 cggctgggtc aagggctggc gcgcgctgtt cctgaccagc gtcgccgtgc ccggcgagct
     3001 gccggccgac accaagacct ggctgcgcca gcagcagcgc tggcaggacg gcttccgcca
     3061 cgtctcgctg cgcatggtcc cggcgatcct caggagcggc gacatcacgc cgtcgtcgaa
     3121 ggcggccgcg ctgctgcatc tctgcatgtc gctgaaccag cctgtgctgc tggtcggcgt
     3181 cgtgtcgggc ttggtggccg ccgtgctggc accatcgctg atcgcactgc tgctgacgct
     3241 gttcctactg acgctggcct gggtgctgtt ctgcgccgcc accttcctgc gcgccggcca
     3301 caacttcatt cgcggcggcg cgatgtcgcc aatgcgtttc accctggtgc tgctgcgctt
     3361 cgtcggcggt cagctcgccg tgctggtgcg ctcgcttgcc gtgcacctcg caaagctcct
     3421 gaaccggccc aagcccatcg tcttcgaccg cacgcccaag cgcggcgcct aggcgagcac
     3481 gctctcgcgc agcagcggat ggtgggcgca gcgcagaccg ccgccgatcg agatcgggcc
     3541 gtcgaacggc agggcgatga cgtcgatctt gcgctggcgc agctcctcga tgactcggcc
     3601 gttgtcggtg tcgacgatga cgcggccctc ctcgaggacc agcgcgttgg tggccagccg
     3661 attggcctcg tcggtcgcca ccgcgatctt gtcccagccg cgcagtgaca tcggcaggcc
     3721 gtctataagc ttctccgggc aatagaccag caggccgggt ttgatcagcg ccagggcgca
     3781 gtcgaggtgg agcacgttcg acctcatggc caccggaatc acccggtatt tctcgcctag
     3841 cagggcctgc agccagtcgg cgccggcgag gtcggaggcg cagcccgaga tgccgacata
     3901 gatctcatag ccgttcagta gcgtgtcgcc gccttcgagg aacggcccgt cgacgcaggc
     3961 cg
//
LOCUS       DASWGA010000910        11027 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1361174, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000910 DASWGA010000000
VERSION     DASWGA010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 11027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11027
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361174"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VF991_21015"
     CDS             complement(<1..470)
                     /locus_tag="VF991_21015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9558987.1"
                     /translation="MGFTAGEIAAMLKSGATKMAQTIATRAAGRNGMIVRATRREVLR
                     YGSAAAAATALSSAALAEESWPSKPIRIICGYPAGGLTDIFARAYGDYISQKTGQPVY
                     VENKAGASGAIAAEQVKSAAPDGYTLMWTISTTMVMNKVLFKKLPYDPDKDFVL"
     gene            512..1612
                     /locus_tag="VF991_21020"
     CDS             512..1612
                     /locus_tag="VF991_21020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558988.1"
                     /translation="MTILQNCRRLRSIVVALALFSPCAAQAQSPGEARNDQGVCDTVA
                     KTILVVEPPGGSRGPWQAPLSALSKASPGVVSIDKEGWRGKGKEDALDKWRREYRAEP
                     SLVEALGKLAGDDWTFPLYRFGRSSLHMAKIIEGSASCQGFLFFDAPPTAAAHPIAAP
                     PVVQTAEPFAFCYRTTAYAGEIVGVPAFIVETDQDSTVELSFTPWRDGGWQRECRVTI
                     RFRDVFEVTDRFCKGVDCQEMANQALSLVKKVDQRPQAAQEDASGGGEKFQAMKELAD
                     KEPGSIQSFPTFGSSIRGLDSAEFAPDPVVLPIVVGGETYLARLGHSAVGWRTYPDYL
                     LAAYRMVGNSLEPVAGLLITMTRGKPISATVN"
     gene            complement(1640..2626)
                     /locus_tag="VF991_21025"
     CDS             complement(1640..2626)
                     /locus_tag="VF991_21025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9558989.1"
                     /translation="MIVRPTRRDVLRYGSAAALAALPVPAIAQAWPNRPIRIVCTYPA
                     GGLTDVFARAYGEYIAQKTGQPVVVENKAGAAGAIGAEIVKAAPADGYTLMFTNSTTM
                     IMNKVLFKKLPYDPDKDFVLIAWFNTGHLPTIINKDVPATNVAEFAAWARGRKVSLAT
                     YGAGSYAHVVAETLNRHYGLTMEAVHYRGEALMWQDVASGAVQGASGSYATASPVLQS
                     GAGRAIAVPTMERMRKLPDVATFHEQGLTEKAFQVRGWVGCSAPAGTPEAIVQRLSDL
                     MVEGGKTERIQKIIDTFGIDEAARDRAYFKKVLDEEGPVWLDVIKSLNIEPQ"
     gene            complement(2680..3873)
                     /locus_tag="VF991_21030"
     CDS             complement(2680..3873)
                     /locus_tag="VF991_21030"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9558990.1"
                     /translation="MAGPLAGVRILDCTTVVLGPWAAQQLGDLGADVIKIEPPEGDTT
                     RQLGPARHPGMAAFYLGCNRSKRSIVLDLKQESGRAALFKLAETADVLMHNYRPDPAK
                     RLGVEYEAFEKINPRLVYLATYGYRSAGPMGAKAAYDDIIQAGSGLASLQAVVAGQPR
                     FLPTIVADKTSSNGVVSAVLAALFARERTGLGQAVEVPMFETLVSFVMVEHLYGETFR
                     PALETAGYKRVLNKERRPYPSKDGYFALLPYTDSHWKEFCGLVGREDLAKDPRFTSLA
                     NRLKNVEHYYATLAEICATRTNAEWVELLRTSNVPHGPVNTLEDLFVDPQLQATGFWK
                     EVEHPTEGRLRMPDIPPRFSKTKPEITRLQPGLGEHSVEVLREAGFTAGEIDAMLKSG
                     ATKTA"
     gene            4210..4527
                     /locus_tag="VF991_21035"
     CDS             4210..4527
                     /locus_tag="VF991_21035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558991.1"
                     /translation="MRGFEWRTVLAAAIAASGMFLAAGAQAHDDDEWRWKHRHHDHGR
                     WHHEPERRFVYERPVVYERPVYVQRQPVYVAPAPVMMAPMAPMYSQPVDPSLNFNFQI
                     PLR"
     gene            4808..6502
                     /gene="leuA"
                     /locus_tag="VF991_21040"
     CDS             4808..6502
                     /gene="leuA"
                     /locus_tag="VF991_21040"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEX9558992.1"
                     /translation="MSPQKPMMPTAGEKYVAFKPIQLSDRQWPTKTITKPPIWCAVDL
                     RDGNQALIEPMDSDRKTRMFKLLCQMGFKEIEVGFPAASETDFDFVRELIEKKMIPDD
                     VTIQVLTQCRPELIERTFESCRGAKRAIVHLYNSTSTLQRRVVFGMDYSGIVDIAVSA
                     ARLVKQLADADPNTEWVFEYSPESFTGTELEFARDICAAVADVFKPTPQNKLIINLPA
                     TVEMASANIYADQIEWCHRNFKYRDSIVLSLHPHNDRGTGVAAAELGYMAGADRIEGC
                     LFGNGERTGNVDLVTLGLNMFTQGVDPEIDFSNINEIRQTVEYCNQLPVHPRHPYGGD
                     LVFTAFSGSHQDAINKGFKALEASNSKVWEVPYLPIDPADLGRTYEAIIRINSQSGKG
                     GIAYILKSDYGIDMPRLLQVEFSKVIQQIADETGKEILPTLIWDTFRKEYLENVTPVD
                     FISHTTVPDPDRPDVRLLDAKVVYNGKAQTVSGRGNGPIAGYVDALAKNCGVGIKVRD
                     YHQHATGAGSDAQAVSFIEAETGDGRVLWGVGMDSNIVTASLKAVTSAANRAVADK"
     gene            6585..6836
                     /locus_tag="VF991_21045"
     CDS             6585..6836
                     /locus_tag="VF991_21045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558993.1"
                     /translation="MSRCRPKTPAAWLLIGVAVGAVVGACAAGANQPNMQAALGSLQA
                     ARAELIRAIPNKGGHRERAIGFVDSAIAETRAGISYAGP"
     gene            6888..8291
                     /locus_tag="VF991_21050"
     CDS             6888..8291
                     /locus_tag="VF991_21050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HEX9558994.1"
                     /translation="MAKAKKTKAKKSPRKSPPRKHPAGAPDVNLLADLMKWAKAAGAD
                     AADALYVNGESISVAQRMGKREKLESSEGRDLGLRVFVGQRQAFVSSTDFAPKALRIL
                     AERAVDMARAVPEDPVCGIAPADLLAESWPDLDLDDKRRPSAKALLAMAAEAEDAARA
                     VKGVTNSEGAEAGWGRTSVVLAASNGFCGGYRRSGYSLSCAVLGGEGTGMERDYEWSS
                     AVHLEDLMAPARVGRNAGKFVVRRLNPRKARSARVPVVYDRRVSGGLIGHLAGAINGR
                     AVARGTSFLKDKMGEKIFADGLRILDNPHRKRGLGSRPFDAEGLATKRLAVIDDGRLT
                     TWLLDLAAARQLKLKPTGHATRGTSGPPSPTTSNFYLERGKLPVEELISDIKSGLFIT
                     DLIGFGINGVTGDYSRGASGFWIENGKLAWPVSGITVAGNLKDMFLNMTPANDLQFKG
                     ATNAPTVRIEGMTVAGS"
     gene            8305..9504
                     /locus_tag="VF991_21055"
     CDS             8305..9504
                     /locus_tag="VF991_21055"
                     /inference="COORDINATES: protein motif:HMM:TIGR02283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEX9558995.1"
                     /translation="MIPLARIAFLAATTVLLAGPAFAQSEFQACLQNIQAEATRQGVP
                     AQLADRAFQGLTPDQKVVDLDSRQPEFSLTYAKYVGASVTPERVVKGQQKMAQHRALL
                     DALQAEYGVPPQYIMSFWGMETNYGGFMGDFQVVRSVATLGCLTKRQAFFSNETVQAL
                     RILAMNHMTREQMRGSWAGAMGNMQFMPSTFVKWGVDRDGNGRIDLWNSLPDAFASAA
                     NFLRGIGFRPGLPSSEEVVLPQGFALDQADSTIEKPVRAWAAMGVKKAGGAPLANVDD
                     PSSIILPAGWRGPAFILYPNFKAVMNWNRSTLYALAVGVLARQIAGGPPVMQAPPADD
                     EPLSRDTVIDLQARLAKHGLYTDETDGLLGPKTRSAVRLFQKQVGLPADGHPTPDMVR
                     RLQQTVR"
     gene            9518..10231
                     /locus_tag="VF991_21060"
     CDS             9518..10231
                     /locus_tag="VF991_21060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558996.1"
                     /translation="MTAFVVLNNRSGVHGVAGTTLPAVETWCMTHFRRDVLQFTQVLT
                     ARFNGGLIVLRVISADRLLVRARIYQAGVHIATVALRFDPRLRQAHISWFVVVMAGRG
                     STAAKHLLQNLLLIQRDCGVRRITLQAALTHGGYVWATHGFLPATNTKWQVLAKRLAA
                     KFTVLAANFAPAEVTAIERLLQAQDRLALRAIAAIATRHGSTTLGKHLLMGERWDGEL
                     DLSDEPSALIYFRRIGLIA"
     gene            10228..10575
                     /locus_tag="VF991_21065"
     CDS             10228..10575
                     /locus_tag="VF991_21065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558997.1"
                     /translation="MTKKPGPDVPSLVVAANAEPKRGVRLAVAARAPSKARPAATRSG
                     SRAFVAVEDVLFAGMGKRVLAAVFTDAEIERLATLFGLSADEVAELYRPADLRPVAAS
                     APRRRRVRSTPAG"
     gene            complement(10514..>11027)
                     /locus_tag="VF991_21070"
     CDS             complement(10514..>11027)
                     /locus_tag="VF991_21070"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558998.1"
                     /translation="PRCFSLMAGAGFDAKVVAGVSAPFKRRWGRAAYVWRSLIEARRY
                     RPVRYGVEIDGVRHEASSVIVTRSRHYAGPYIVAPDAALDEPLLHVCLFERWGRSHTL
                     RFGLALLLGRLPRTGGYRVVCGREVHVSVLSDAGEDGLQPVQIDGDNALTLPVSIGLA
                     AGAVRLLRPA"
BASE COUNT         1919 a         3685 c         3549 g         1874 t
ORIGIN      
        1 atcagcacga agtccttgtc cgggtcgtag ggcagtttct tgaacagcac cttgttcatg
       61 accatcgtgg tcgagatggt ccacatcagc gtgtagccgt cgggggcggc gctcttcacc
      121 tgctcggctg cgatggcgcc gctcgcgccg gccttgttct cgacgtacac cggctgtccc
      181 gtcttctgcg agatgtagtc gccataggcg cgcgcgaaga tgtcggtgag gccgccggcg
      241 ggatagccgc agatgatgcg gatcggcttg cttggccagg attcttccgc caaggccgct
      301 gacgacagag ccgtcgcagc cgctgcggca gaaccataac gcagcacctc gcgccgcgtc
      361 gcacggacga tcattccatt cctccctgcg gcgcgcgttg cgatggtctg ggccatcttg
      421 gtcgcgccgg atttcagcat ggcggcgatt tctccggcgg taaagcccac cgcacgttat
      481 agtggcagct ctggccgatc gggtgctggc gatgacgatc ctgcagaact gtcgaaggct
      541 tcggtcgata gtggtcgcgc tggcgctctt ctcgccgtgc gccgcccaag cgcagtcgcc
      601 gggtgaagcg cgcaacgatc agggcgtttg cgacaccgtc gccaagacca ttcttgtggt
      661 tgaaccccct ggcggttcgc gcggcccctg gcaggcaccg ctttccgcgc tgagcaaagc
      721 atcgccgggc gtggtcagca ttgataagga gggatggcgc ggaaagggga aagaggacgc
      781 gctggacaag tggcgccgcg agtatcgagc cgagccaagc ctggtggagg cgctcggaaa
      841 gctggcaggc gacgactgga cttttccgct ttaccgcttt ggcagaagtt ccctgcatat
      901 ggccaagatc atcgagggat cggcaagctg tcagggcttt ttgttcttcg atgctccgcc
      961 cacggcggcg gcgcacccga ttgctgcccc acctgttgtc cagaccgcgg aaccattcgc
     1021 gttctgctac aggacgacgg cctatgccgg agagatagtg ggcgtgccgg cttttatcgt
     1081 cgagaccgat caagacagca cggtcgagtt gtcctttacg ccctggcggg acggcggctg
     1141 gcaacgagag tgtcgagtta ccattcgctt cagggacgta ttcgaagtga ccgaccggtt
     1201 ctgcaagggc gtggactgcc aagagatggc gaaccaggcc ctgtcgctcg tcaagaaggt
     1261 cgaccagcgc ccgcaagccg cgcaggagga tgccagcggc ggaggcgaaa aattccaggc
     1321 catgaaagaa ctggccgaca aagaaccagg cagcatccaa tcatttccga ccttcggcag
     1381 cagcattcgc ggactcgact cggctgaatt tgcgcccgat ccggtcgttc tgccgatcgt
     1441 cgtcgggggc gagacttacc tcgcccgtct gggccactcg gcggtgggtt ggcgaaccta
     1501 tccagattac ttgttggctg cctataggat ggtcggcaac agcctcgagc cggtggccgg
     1561 cctcctcatc accatgacgc gcggcaagcc gataagcgca acggtcaact gagagcttgc
     1621 tctagaaaac ggcggccgct cactgcggct cgatgttcag gctcttgatc acgtcgagcc
     1681 agaccggccc ttcctcgtcg aggaccttct tgaaataggc cctgtcgcgc gccgcttcgt
     1741 cgatgccgaa ggtgtcgatg atcttctgga tgcgctcggt cttgccgcct tcgaccatca
     1801 gatcggagag cctctgcacg attgcctccg gcgtgcccgc cggcgccgaa cagccgaccc
     1861 agccgcgcac ctggaatgcc ttctcggtga gaccctgctc gtggaaggtt gcgacgtccg
     1921 gcagcttcct catgcgctcc atggtcggca cggcgattgc ccggccggcg cccgactgca
     1981 gcacggggct tgccgtggcg tagctgccgc tcgcgccctg gacggcgcca gaagccacgt
     2041 cctgccacat caacgcctca ccgcggtagt ggacggcctc catcgtgagc ccatagtggc
     2101 gattgagcgt ttcagccacg acatgggcgt aggaacccgc gccgtaggtg gcgagcgaaa
     2161 ccttgcgtcc gcgtgcccag gcggcgaact ccgcgacgtt ggtcgccggc acgtccttgt
     2221 tgatgatcgt cggcagatgg ccggtgttga accacgcgat cagcacgaag tccttgtccg
     2281 ggtcgtacgg cagtttcttg aacagcacct tgttcatgat catggtcgtc gagttcgtga
     2341 acatcagcgt gtagccgtcg gctggtgcgg ccttgacgat ctccgcgccg atcgcgcccg
     2401 ccgcacccgc cttgttctcg acgaccaccg gctggccggt cttctgcgcg atgtactcgc
     2461 cgtaggcgcg ggcaaaaacg tcggtcaggc cacccgccgg ataggtgcag acgatacgga
     2521 tcggcctgtt cggccaggcc tgcgcgatgg ccggcaccgg caaagcggcc agcgccgccg
     2581 ccgaaccgta gcgcaacaca tcgcgccgcg tcgggcggac gatcattgtt ccctcccctt
     2641 tggggtccct tggcgcgcca ctccaaggtt aggacggtct cacgccgtct tggtcgcgcc
     2701 cgatttcagc atggcgtcga tttcgccggc ggtaaagccg gcctcgcgca gcacttcgac
     2761 actgtgctcg ccgagccccg gctgcaggcg cgtgatctcg ggcttggtct tgctgaagcg
     2821 cggcgggatg tcgggcatgc gcagccgtcc ctcggtcgga tgctcgactt ccttccagaa
     2881 gccggtcgcc tggagctgcg ggtcgacgaa cagatcctcc agcgtgttga ccggtccgtg
     2941 cgggacgttg gaggtcctca gcaattcgac ccactcggcg ttggtgcgcg tggcgcagat
     3001 ctcagccagg gtggcgtagt aatgctcgac attcttgagg cgattggcga gcgaggtgaa
     3061 gcgcggatcc ttcgccagat cttcgcgacc gaccaggccg cagaattcct tccagtggct
     3121 gtcggtgtaa ggcagcaagg cgaagtaacc gtccttggaa ggatagggcc ggcgctcctt
     3181 gttgagcacg cgcttgtagc ccgccgtctc gagcgccggc cggaacgtct cgccgtagag
     3241 atgctcgacc atgacgaagg agaccagggt ttcgaacatc ggcacttcga ccgcctggcc
     3301 caggccggtg cgctcgcgcg cgaatagtgc cgccagcacg gccgagacga cgccgttgga
     3361 actggtcttg tcggcgacga tggtcggcag gaagcgcggc tggccggcga ccacggcctg
     3421 cagcgacgcc aggcccgatc ctgcctggat gatgtcgtcg taggctgcct tggcgcccat
     3481 cggcccggcc gagcgatagc cgtaggtcgc gagatagacc agtcgcggat tgatcttctc
     3541 gaacgcctcg tactccacgc ccagccgctt ggcgggatcg ggccgatagt tgtgcatcag
     3601 cacgtcggcg gtttcagcga gcttgaacag cgcggcgcgg ccggactcct gcttgaggtc
     3661 gagcacgatc gaacgcttgg aacgattgca gccgagatag aaggcagcca tgcccggatg
     3721 gcgcgccggt ccgagctggc gcgtggtgtc gccttcgggc ggctcgatct tgatgacatc
     3781 ggcgccgaga tcgccgagct gctgagcggc ccacggcccc aacaccaccg tcgtgcagtc
     3841 gagaatcctc acgccagcca atggacctgc catcgagcgc atcctccctt gctttgtccc
     3901 ggactaccac aaaccggtca caaccgtgtg ggaaacatgg cgggctggcg gtcctcatgg
     3961 ccgccacaat gcaaatgcaa cggtccttgt agtccgggtt ttttcgggag tgatcgaagg
     4021 aggccgccct gcacgagacc ggattgcgaa acacgatgcg ataacaacag ccactggccg
     4081 gtcacggcca cccgcgagat atatcggggg gagggccggc aaattcctcc gtgtcgtcac
     4141 aattccccac gtatcccctt gcatcgggaa gacaacaacg cgtcatccct gttgtcacag
     4201 gaggcagtaa tgcgtggatt tgagtggagg accgtcctgg ccgccgcgat tgcggcttcc
     4261 ggtatgtttc tggccgccgg tgctcaggcc catgacgacg acgagtggcg ctggaagcat
     4321 cggcatcacg atcacggccg ctggcaccac gagccggaac gccgcttcgt ttacgagcgt
     4381 cccgtcgtct acgagcgtcc cgtctacgtc cagcgccagc ccgtttacgt cgcccccgcc
     4441 ccggtcatga tggcgcccat ggcgccgatg tactcgcagc cggtcgatcc cagcctgaac
     4501 ttcaacttcc agatccctct gcgctgatat ttcatggact tgggacccgc cggacggacg
     4561 tccgtccggc gggttgactc ccgccgcggg gcccttattg tggcgccccc atgctgcgac
     4621 tgacgacgct tcgacttatt ggctgatccg ccgccccatc ccgggatcct tggaggggcc
     4681 ctgcggatcg tttgtcgttc gtctcatccc accaccagtc gccgccagcc tttcctgcca
     4741 tcgcagtatt cgtcttgagc catagtcccg agtcaaaggg cccgtgcgcg gcgcgaggag
     4801 tccatcgatg tcaccccaga aacccatgat gccgaccgcg ggcgagaagt acgtcgcctt
     4861 caagcccatc cagctcagcg accgacaatg gccgaccaag accatcacca agccgccgat
     4921 ctggtgcgcg gtcgacctgc gcgacggcaa ccaggcgctg atcgagccga tggattccga
     4981 ccgcaagacg cggatgttca agctgctctg ccagatgggc ttcaaggaga tcgaagtcgg
     5041 cttcccggcg gcgtcggaga ccgacttcga cttcgtgcgc gagctgatcg agaagaagat
     5101 gatcccggac gacgtcacca tccaggtgct gacgcagtgc cggccggagc tgatcgagcg
     5161 caccttcgaa tcgtgccgcg gcgccaaacg cgccatcgtc catctctaca actcgacctc
     5221 gaccctgcag cgccgggtcg tgttcggcat ggattacagc ggcatcgtcg acatcgccgt
     5281 gtcggccgcc aggctcgtga agcagctcgc cgacgccgat cccaataccg agtgggtgtt
     5341 cgagtattcg cccgagagct tcaccggcac cgagctcgag ttcgcgcgcg acatctgcgc
     5401 cgccgtggcc gacgtcttca agccgacgcc gcagaacaag ctgattatca acctgccggc
     5461 gacggtcgag atggcctcgg ccaacatcta tgccgaccag atcgaatggt gccatcgcaa
     5521 cttcaagtac cgcgattcga tcgtgctcag cctgcacccg cacaacgacc gcggcaccgg
     5581 cgtggcggcg gccgagctcg gctacatggc cggcgccgac cgcatcgagg gctgcctgtt
     5641 cggcaacggc gagcgcaccg gcaatgtcga cctggtgact ctggggctca acatgttcac
     5701 ccagggcgtc gatccggaga tcgacttctc gaacatcaac gagatccgcc agaccgtcga
     5761 atactgcaac cagctgccgg ttcatccgcg ccatccctat ggcggcgacc tggtgttcac
     5821 cgccttctcg ggctcgcacc aggacgccat caacaagggc ttcaaggcgc tcgaggcgtc
     5881 gaacagcaag gtctgggaag tgccctacct gccgatcgac ccggccgatc tcggccgcac
     5941 ctatgaggcg atcatccgga tcaacagcca gtcgggcaaa ggcggcatcg cctacatcct
     6001 gaagagcgac tacggcatcg acatgccgcg ccttctccag gtcgagttct ccaaggtgat
     6061 ccagcagatc gccgacgaga ccggcaagga gatcctgccg accttgatct gggacacctt
     6121 ccgcaaggag tatctcgaaa acgtcacacc cgtggacttc atcagccaca ccacggtgcc
     6181 cgatcccgac cgtcccgacg tgcgtcttct cgacgccaag gtcgtctaca acggcaaggc
     6241 gcagaccgta agcggccgcg gcaacggtcc gatcgcgggc tatgtcgacg cgctcgccaa
     6301 gaattgcgga gtcggcatca aggtgcgcga ctaccatcaa cacgccacgg gcgccggctc
     6361 cgacgcgcag gccgtcagtt tcatcgaagc tgaaaccggt gacggccggg tcctgtgggg
     6421 tgtcggcatg gactccaaca tcgtgacggc gtcgctcaag gccgtgacgt cggcggccaa
     6481 tcgcgcggtc gccgacaaat agcggtttcg tcccgcaacc gcgttctcta cgatctcgaa
     6541 tgggcgggcg cattcccgcc cgttcaacgt tggagataca atcgatgtcc cgctgccgtc
     6601 ccaagacgcc cgctgcctgg ctgctgatag gcgtcgccgt cggtgccgtg gttggcgcct
     6661 gcgccgcagg ggcgaaccag cccaacatgc aagctgccct cggttcgctg caggcggcgc
     6721 gcgccgagtt gatccgggca atacccaaca agggcggcca tcgcgaacgg gcgatcggct
     6781 tcgtcgactc cgcgatcgcc gagaccaggg ccggcatcag ctacgccggc ccctgatgtc
     6841 ggctgtggtc tcgacggcac ggcccgttag cgcgtagaac ggcggtcatg gccaaagcga
     6901 agaagaccaa agcgaagaag tcaccgcgga agtcgccacc caggaagcat ccggcgggcg
     6961 cgccggacgt caacctgctt gccgacctga tgaaatgggc caaggcagcg ggcgccgacg
     7021 ccgccgacgc gctttacgtc aatggcgagt cgatctccgt cgcccagcgc atgggcaagc
     7081 gcgagaagct cgagagcagc gagggccgcg atctcggcct gcgcgtcttc gtcggccagc
     7141 gccaagcctt cgtctcttcg accgacttcg cgcccaaggc gctgcgcatc ctggcggagc
     7201 gggcggtcga catggcgcgc gccgtgccgg aggatccggt ctgcggcatc gcgccggcgg
     7261 acctgctggc cgagagctgg cccgacctcg acctcgacga caagcgacgg ccgtcggcca
     7321 aggcactgct ggcgatggcc gccgaagccg aggacgccgc gcgcgccgtc aagggcgtga
     7381 ccaattccga aggcgccgag gcgggctggg gccgcacatc ggtcgtgctg gccgccagca
     7441 acggcttttg cggaggctat cggcgcagcg gctattcgct gtcctgcgcg gtgctgggcg
     7501 gcgagggcac cggcatggag cgcgactatg aatggtcgag cgcggtgcat ttggaggacc
     7561 tcatggcgcc ggcgcgggtc ggccgcaacg ccggcaagtt cgtcgtccgc cggctcaacc
     7621 cgcgcaaggc gcgcagcgct cgggtgccgg tggtctacga ccgccgcgtg tcaggcgggc
     7681 tgatcggcca tctcgcgggc gccatcaacg gccgcgccgt ggcccgcggc acgtccttcc
     7741 tgaaggacaa gatgggcgaa aagattttcg ccgacggcct ccgcattctc gacaatccgc
     7801 atcgcaagcg cgggctgggc agccggccgt tcgacgccga gggcctggcg accaaacgcc
     7861 tcgccgtgat cgacgatggc cggctcacga cctggctgct cgacctggct gcagcccgcc
     7921 agctcaagct caagccgacc ggccatgcca cacgcggcac ctcgggcccg ccctcgccca
     7981 ccacctcgaa tttctacctg gagagaggca agctcccggt cgaggaactg atctccgata
     8041 tcaagagcgg tctcttcatc accgacctga tcggctttgg catcaacggc gtcaccggcg
     8101 actacagccg tggcgcgtcg ggcttctgga tcgagaacgg caagctcgcc tggccggtga
     8161 gcggcatcac ggtggcgggc aacctcaagg acatgttcct caacatgacg ccggccaacg
     8221 acctgcagtt caagggcgcc accaacgcgc cgacggtgcg aatcgaaggc atgaccgtcg
     8281 ccggctcgtg ataaactcgc cggcatgatc cctcttgcaa gaatcgcgtt tctcgccgca
     8341 acgacggtgc tcctggccgg accagcattc gctcaaagtg agttccaggc ctgtcttcag
     8401 aacatccagg ccgaagcgac gcgccagggc gtgccggcac agctcgccga ccgcgccttc
     8461 cagggcctca cgcccgacca gaaggtcgtc gacctcgatt cacgccagcc ggaattctcg
     8521 ctgacctacg ccaagtacgt cggcgcctcg gtgacgcccg agcgcgtcgt caagggccag
     8581 cagaagatgg cgcagcaccg cgccctgctc gacgccctgc aggccgagta cggcgtgccg
     8641 ccacaataca tcatgtcgtt ctggggcatg gagaccaact acggcggctt catgggcgac
     8701 ttccaggtcg tgcgctcggt ggcgacgctc ggctgcctga ccaagcgtca ggcgttcttc
     8761 agcaacgaga cggtgcaggc actgcgcatc cttgccatga accatatgac ccgcgagcag
     8821 atgcgcggct catgggccgg cgccatgggc aacatgcagt tcatgccctc gaccttcgtg
     8881 aaatggggcg tcgaccgcga cggcaacggc cgcatcgacc tctggaacag cctgcccgac
     8941 gccttcgcct cggccgccaa ttttttgcgc ggcatcggct tcaggccggg cctgccgtcg
     9001 agcgaggagg tcgtcttgcc gcagggcttt gcgctcgacc aagccgacag cacgatcgaa
     9061 aaaccggtgc gtgcctgggc ggcgatgggc gtgaagaagg cgggcggcgc gccgctggcc
     9121 aatgtagacg atccatcctc gatcatcctg ccggcgggct ggcgcggccc cgccttcatc
     9181 ctctatccca acttcaaggc ggtgatgaac tggaaccgct cgacgctcta tgccctggcg
     9241 gtcggcgtcc tggcgcgcca gatcgccggc ggtccgccgg tcatgcaggc gccgccggcc
     9301 gacgacgagc cattgtcgcg cgataccgtc atcgacctgc aggcgcggct ggccaagcac
     9361 ggcctctata ccgacgagac cgatgggctg ttgggcccca agacacgctc ggcggtgcgg
     9421 ctgttccaga aacaggtcgg cttgccggcc gacggtcatc cgacgcccga catggtgcgc
     9481 cgcctgcagc agacggtgcg gtaggcgccg gcgccctgtg acggcgttcg tcgtattgaa
     9541 caatcgaagc ggggtgcatg gcgtcgccgg aaccactctg ccggccgtcg agacgtggtg
     9601 catgacgcat ttccgccgcg acgtgctcca gttcactcag gtgcttacgg cacgcttcaa
     9661 cggcggtctg attgtattac gggttatctc cgccgaccgg ctgctcgtgc gagcccggat
     9721 ctaccaggcc ggtgttcaca tagcgacggt cgcccttcgc ttcgatccgc gactgcgaca
     9781 agcgcacata agctggttcg tcgtcgtcat ggccggccgc ggcagtacgg ccgccaagca
     9841 tctgctgcag aacctgctcc tgatccagcg ggattgcggc gtcaggcgca tcacccttca
     9901 agcggctctc acccatggcg gttacgtttg ggccacacat ggcttcctgc cggcaaccaa
     9961 caccaagtgg caggtgctcg ccaaacgcct ggcagcgaag ttcacagtct tggcggcgaa
    10021 cttcgcgccg gcagaggtga cggcgatcga gcggctcctg caggcgcagg atcgcctggc
    10081 tctgcgggcg atcgcggcca tcgccacgcg ccatggcagc acgacgctcg gcaagcatct
    10141 gctgatgggc gagcgctggg acggcgagct cgatctttcc gacgagcctt ccgcactcat
    10201 atattttcgg cgtataggat tgatcgcatg accaagaagc ctggacccga tgtgccgagc
    10261 ctcgtcgtgg cggcaaatgc cgagccgaaa cgtggcgtcc ggctggctgt cgccgcgcgc
    10321 gcgccgtcga aggccaggcc ggcggcaacg cgttcgggga gtcgggcgtt cgttgccgtg
    10381 gaagacgtgc tgtttgccgg catgggcaag cgggttttgg ccgctgtctt caccgacgcc
    10441 gaaatcgagc ggcttgcgac gctgttcggc ctgtccgccg atgaggtggc ggagctctac
    10501 cggcctgccg acctcaggcc ggtcgcagca agcgcaccgc gccggcggcg agtccgatcg
    10561 acaccggcag ggtgagagcg ttatcgccat cgatctgcac cggctggagg ccgtcctcgc
    10621 cggcgtcgct cagcaccgag acgtgcactt cgcggccgca aaccacgcga tagccgccgg
    10681 tccgcggcag gcggcccagc agcagggcga gcccgaaacg cagcgtgtgc gaacggcccc
    10741 agcgctcgaa caggcagaca tgcagcagcg gctcgtcgag cgcggcgtcg ggcgccacga
    10801 tataaggccc ggcataatgg cggctgcggg tgacgatcac cgacgacgcc tcgtgccgca
    10861 cgccatcgat ttccacgcca tagcgcaccg gtcgatagcg gcgtgcttcg atcagcgagc
    10921 gccacacata ggcggcgcgc ccccagcgcc gcttgaaggg cgcgctgacg ccagccacca
    10981 ccttggcatc gaagcccgcg cccgccatca gcgagaagca gcgcggg
//
LOCUS       DASWGA010000911         3150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2385684, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000911 DASWGA010000000
VERSION     DASWGA010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3150
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2385684"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..951
                     /locus_tag="VF991_21075"
     CDS             <1..951
                     /locus_tag="VF991_21075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9558999.1"
                     /translation="NPNPNPNPNPNPNPNPNPNPNPAPPGPPRTSQTLTGYSSGVFTI
                     SRQTGGEEHAARVRVLKQGAVSITTDATNSQAKATITANGLNGSTATLQLGGVGGLGA
                     PNSGFADDNTYVIGTQVNDPSRLSSLRRGDNTQRLNDQTLLASANAAQNTLPANPGCK
                     CEFLSWGWWASSIPDPQHEGRTYTALGTYVVGKVPTVPLPQTGSATYTGFMAGVAQNA
                     RDAPHLASGSYQNVWNFQSRTGVFNGSFDSRNYAGTTQATGGPGSTTFAGSFSGGNRS
                     GKLSGGFFASPSDPAAYQAGTFSVGGHSHYRATGIFAGQR"
     gene            complement(942..1457)
                     /gene="mobB"
                     /locus_tag="VF991_21080"
     CDS             complement(942..1457)
                     /gene="mobB"
                     /locus_tag="VF991_21080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015915896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEX9559000.1"
                     /translation="MSREGVSQRLVFGVTGWKNSGKTTLVERLVSEFVRRGWTVATVK
                     HAHHDVDIDQPGTDSYRHRAAGATEVALVGGLRYAIMREQDEPGLAEVLARLSPADLV
                     LVEGFKRERHPKIEVRSGNDEVTAPPLAPKDPSIVAIAADQPLGDQRLPCFRRDDIAA
                     IADFIAGLRQR"
     gene            complement(1454..2260)
                     /gene="fdhD"
                     /locus_tag="VF991_21085"
     CDS             complement(1454..2260)
                     /gene="fdhD"
                     /locus_tag="VF991_21085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEX9559001.1"
                     /translation="MSDQGSVRRAARRLTAAGDEALDEIVAQEVAVALVYNGISHAVM
                     MATPCDLEDFARGFSLTEHIVEKPSEIYDIEVEPVPRGIEVRLTIAGQRMAGLQERRR
                     TLAGRTGCGLCGVDSIDEAMRPVAVSASRVTVSRRAIERAMAALPGEQRINRLNGATH
                     AAGWAAADGTLLAVREDVGRHNALDQLGGAIARLEGARAAPGNFVVVTSRCSYEMVHK
                     TAALEAAAIAAVSAPTSLAIEIAEQAGIALVAFVRDGRLTVYANPQRIVS"
     gene            complement(2257..2628)
                     /locus_tag="VF991_21090"
     CDS             complement(2257..2628)
                     /locus_tag="VF991_21090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559002.1"
                     /translation="MKADFEQWLAAQFADTGPFTALIVLVRIAGEEVVPLKSSYAHLV
                     GDDMAWSEMRALLDRARAPWDGVAFFVGLGHAGGPLPDAVAARKLKNVEADIKADPLA
                     LNRGLFFDREGRHLRIDEVAR"
     gene            complement(2630..>3150)
                     /locus_tag="VF991_21095"
     CDS             complement(2630..>3150)
                     /locus_tag="VF991_21095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559003.1"
                     /translation="RSGQLGPVMPSATGTLIARLQADCTAAEATERAVRANVEAQLKE
                     AERARAFAWRRLSALRDMARIAALEPDRAVAVERQLAALFRDIGWIENGLEELGEGAR
                     PLLDWLRPIAEALHAGSHPDEAAGGTVEPPPVADPIAAFLAFEAWYEADRGQPFLQVF
                     ERYVPPTPLVEF"
BASE COUNT          536 a         1138 c         1024 g          452 t
ORIGIN      
        1 aaccccaacc cgaaccccaa cccgaacccc aacccgaacc ccaaccctaa tccgaacccc
       61 aatccagccc cgcctggccc accgcgcacc agccagacct tgacgggcta ttccagcgga
      121 gtcttcacga tcagccggca aacggggggc gaagagcacg cagcgcgcgt gcgtgtcctg
      181 aaacagggcg ctgtctcgat cacaaccgac gcgaccaaca gccaggccaa ggccacgatc
      241 acggccaacg gcctcaatgg ctcgacagcc accctgcagc ttggcggcgt aggcgggctg
      301 ggcgctccga acagcggatt cgccgacgac aacacctatg tcatcgggac ccaggtcaac
      361 gatccttcgc ggctgtcgag cttgcgacgg ggcgacaaca cccagcggct gaacgaccaa
      421 acattactgg cgagcgccaa cgccgctcag aatacgttgc cggccaatcc cggctgcaag
      481 tgcgaatttc tcagttgggg ttggtgggcc agcagcatcc ccgaccccca gcacgaaggc
      541 agaacctata ccgccctcgg aacctacgtc gtcggcaagg tgcccaccgt gccgctgccg
      601 cagacgggga gcgcgaccta cactggcttc atggccggcg tcgctcagaa cgcccgggat
      661 gccccccatc tcgcgtccgg cagctaccag aatgtctgga attttcagag ccgcaccggg
      721 gtcttcaacg gcagcttcga cagcagaaac tatgccggca cgactcaggc gaccggcgga
      781 ccgggcagca cgacgttcgc cggcagcttc agcggcggca accgctcggg caagctgagc
      841 ggcggcttct tcgcctcgcc gagcgatccc gctgcgtatc aggctggcac gttctcggtc
      901 ggtggccatt cgcactacag agccaccggc attttcgccg gtcagcgctg acgaagtccg
      961 gcgataaagt cggcgatggc ggcaatatcg tcgcgccgga agcacggtag ccgctgatcg
     1021 ccgagcggct gatcggcggc gatggcgacg atgctgggat ctttcggcgc cagaggcggc
     1081 gctgtcacct catcgttgcc tgagcgcacc tcgatcttgg gatgccgctc gcgtttaaaa
     1141 ccctcgacca ggacgaggtc ggcgggcgac agccgggcca acacctcggc aagcccgggc
     1201 tcgtcctgct cgcgcatgat ggcgtagcgc aggccgccga ccagggccac ttcggtcgcg
     1261 ccggcggcgc gatggcgata ggaatcagtg ccgggctggt cgatgtcgac gtcgtggtgt
     1321 gcatgcttga cggtggcgac cgtccagccg cgccgcacga attcggaaac cagccgctcg
     1381 accagggtcg tcttgccgga attcttccag ccggtcacgc cgaacaccag ccgctggctc
     1441 acgccctctc ggctcacgac acgattcgtt ggggattggc gtagaccgtg agccggccgt
     1501 cgcgcacgaa ggccaccagg gcgatgccag cctgctcggc gatttcgatg gcgagcgagg
     1561 tcggcgccga caccgccgcg atggccgctg cttccagtgc cgccgtcttg tgcaccatct
     1621 cgtaggagca ccggctggtc accacgacga agttgcccgg cgcagcgcgt gcgccctcca
     1681 ggcgggcaat cgcgccgccc agctggtcga gcgcgttgtg acggccgaca tcctcgcgca
     1741 ccgccagcag cgttccgtcc gccgccgccc agcccgcggc atgggtggcg ccgttcagcc
     1801 ggttgatgcg ctgctcgccc ggcagcgccg ccatcgcccg ctcgatcgcc cggcgcgaca
     1861 ccgttacgcg cgacgccgat accgcaaccg gccgcatcgc ctcatcgata ctgtcgaccc
     1921 cgcacaagcc gcagccggtg cggccggcca gggtgcggcg ccgctcctgc aggcccgcca
     1981 tgcgctgccc ggcgatcgtg agacgaacct cgatgccgcg cgggaccggt tcgacttcga
     2041 tgtcgtagat ctccgacggc ttttccacga tgtgttcggt gagcgagaag ccgcgcgcga
     2101 aatcctcgag gtcgcagggc gtggccatca tcaccgcatg actgatgccg ttgtagacca
     2161 gcgccaccgc cacctcctgg gcgacgatct cgtcgagcgc ctcatcgccg gcggccgtca
     2221 gccggcgcgc ggcgcgacgg accgatccct ggtcactcat cgcgcgacct cgtcgatgcg
     2281 caaatgccga ccctcgcggt cgaagaacag tccgcgattg agggcgagcg gatcggcttt
     2341 gatgtcggct tcgacattct tcagcttgcg cgccgccacc gcgtcgggca gcggtccgcc
     2401 ggcatggccc aggccgacga agaaggcgac gccgtcccat ggcgcgcgcg cgcggtcgag
     2461 cagggcgcgc atctcgctcc acgccatgtc gtcgccgacc aggtgggcat agctcgactt
     2521 caacggcacg acctcctcgc ctgcgatgcg caccagcacg atcaaggccg tgaacggccc
     2581 ggtgtcggcg aactgggcgg cgagccactg ctcgaagtcg gccttcatcc tagaactcga
     2641 cgagaggcgt cggcggcacg tagcgctcga acacttgcag gaagggctgg ccacggtcgg
     2701 cctcgtacca ggcctcgaag gcgagaaacg ccgcaatggg atcggccacc ggcggcggct
     2761 cgacggtccc gccagccgcc tcatccgggt gcgagccggc atgcagcgcc tcggcgatcg
     2821 gccgcagcca gtcgagcagc ggccgggcac cctcgcccag ttcctccagg ccattctcga
     2881 tccagccgat gtcgcgaaac aaggcggcca gctggcgctc gacagcgacg gcgcggtcgg
     2941 gctcgagggc ggcgatgcgc gccatatccc tcaaggcgct gagccggcgc caggcaaagg
     3001 cccgcgcccg ctcagcctcc ttgagctgag cctcgacgtt cgcccgcacg gcgcgctcgg
     3061 tcgcctcggc ggcggtgcaa tcggcctgca ggcgggcgat cagggtaccg gtggcggacg
     3121 gcatgacggg tccaagttga cccgaccggc
//
LOCUS       DASWGA010000912         2351 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_743202, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000912 DASWGA010000000
VERSION     DASWGA010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_743202"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..810
                     /locus_tag="VF991_21100"
     CDS             <1..810
                     /locus_tag="VF991_21100"
                     /inference="COORDINATES: protein motif:HMM:TIGR01988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX9559004.1"
                     /translation="DPDRADLTLKSGRRLAARLVASAEGRFGTMREEAGIGARAWSYH
                     QIAIVLVAHHERPHRGVAQEKFLPGGPFAILPMRDGANGQHRSSIVWTERADLARRLL
                     ELDGPRFQAEFARRFGDHLGRVEPAGPRWWYPLGLVHAERYIDTRLVLVGDAAHGIHP
                     IAGQGYNLGVRDIAALVEVLVDTKRLGLDIGAADTLERYARWRRADNMAMVAATDLLN
                     RLFSNDIKPLRLIRDIGLAAVNRAPPLRRFFARHAMGLVGDLPRLIRGERP"
     gene            987..1952
                     /locus_tag="VF991_21105"
     CDS             987..1952
                     /locus_tag="VF991_21105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX9559005.1"
                     /translation="MAQAQVPVTVLTGYLGAGKTTLLNRILSEQHGKKYAVIVNEFGE
                     LGIDNDLVVNADEEVFEMNNGCICCTVRGDLIRIIEGLMKRKDRFDGILVETTGLADP
                     GPVAQTFFTDDEVKARTRLDAIVTVVDAKHFLGQLEQGDEAEEQVAFADVILLNKTDL
                     VSADDLKKVEDKIRSINPFARLHRTQKSQVELGAILDKGAFDLKRILEFEPDFLEHGH
                     DHDHEEEVKSVAFSADRPVDPDKFQKWMGALLQLRGGDIFRSKGVLAIDGAPRRYVYQ
                     GVHMMMDSDWGSPWKDSEKRSSKLVFIGRNLDGDNLKRGFEDCLK"
     gene            1957..>2351
                     /locus_tag="VF991_21110"
     CDS             1957..>2351
                     /locus_tag="VF991_21110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559006.1"
                     /translation="MKLDLANPAWRQTLPPARTVTADAPAAACAFSRDGATAAFALGD
                     GSVRSLPADIAASAPEANPPVHGGAVLALVGDPAGDGFVSGGDDGRLLRLGADGAATE
                     LVNQKGKWVEHLAAHRTGAIAAAIGKSAFV"
BASE COUNT          412 a          816 c          757 g          366 t
ORIGIN      
        1 gatcccgacc gcgccgacct tacgctcaag agtggccgcc ggcttgcggc gcggctggtg
       61 gcgtcggccg agggccgctt cggcaccatg cgcgaggaag ccggcatcgg agcgcgcgcc
      121 tggtcctacc accagatcgc catcgtgctg gtggcgcacc acgagcggcc acatcgcggc
      181 gtcgcccagg agaagttcct gcccggcggg cctttcgcca tcctgccgat gcgtgacggc
      241 gccaacggcc agcaccgctc gtcgatcgtt tggaccgagc gcgccgacct ggcgcgtcgc
      301 ctgctcgagc tcgacggccc acgcttccag gccgaattcg cgcgccgctt cggcgatcat
      361 ctcggccggg tcgagccggc cggtccgcgc tggtggtacc cgctgggcct ggtgcacgcc
      421 gagcgctaca tcgacacccg gctggtgctg gtcggcgacg ccgcgcacgg catccatccg
      481 attgcaggcc agggctacaa tctcggcgtg cgcgatatcg cagcgctggt cgaggtcttg
      541 gtcgatacca agcggctggg cctcgacatc ggcgccgccg atacgctcga gcgctatgca
      601 cgatggcggc gggccgacaa tatggccatg gtcgccgcca ccgacctgtt gaaccgcctg
      661 ttctccaacg acatcaagcc gctgcggctg atccgcgata tcggcttggc ggccgtcaac
      721 cgtgcgccgc cgctgcgccg cttctttgcc cgccatgcca tggggttggt gggtgatctc
      781 cccaggctga tcaggggtga aagaccttaa actctcatcg tcatcccgac cgaagccgag
      841 cgcagcgagg cgtagcggag ggacctgttc atttgctcga cgaagacaag gtccctccac
      901 tccgcttcgc tccggtcggg atgacggagg cctagactca aagcccccgc caccctatct
      961 caggggccaa ttttcgagga ctcttcatgg ctcaagcgca agtgcccgtg accgtgctga
     1021 ccggctatct cggcgccggc aaaaccaccc tgctcaaccg tatcctgagc gagcagcacg
     1081 gcaagaaata cgccgtcatc gtcaacgaat tcggcgagct cggcatcgac aacgacctcg
     1141 tggtcaatgc cgacgaggaa gtgttcgaga tgaacaacgg ctgcatctgc tgcaccgtgc
     1201 gcggcgattt gatccgcatc atcgaagggc tgatgaagcg caaggacagg ttcgacggca
     1261 ttttggtcga gaccacgggc ctcgccgatc ccggcccggt ggcgcagacc ttcttcaccg
     1321 acgacgaggt caaggcccgg acccggctcg acgccatcgt gaccgtggtc gacgccaagc
     1381 acttcctcgg ccagctcgaa cagggcgacg aagcggagga acaggtggcc ttcgccgacg
     1441 tgatcctact caacaagacc gatctggtga gcgccgacga cctcaagaag gtcgaggaca
     1501 agatccgctc gatcaacccg ttcgcccgcc tgcaccgcac gcagaagagc caggtcgagc
     1561 tcggcgccat cctcgacaag ggcgccttcg acctcaagcg catcctcgaa ttcgagccgg
     1621 acttcctcga acatggccac gatcacgacc atgaggagga ggtgaaaagc gtggcgttca
     1681 gcgccgaccg cccggtcgat cccgacaagt tccagaaatg gatgggcgcg ctgctgcagc
     1741 tgcgcggcgg cgacatcttc cgcagcaagg gcgttttggc catcgacggt gcgccgcggc
     1801 gctacgtcta ccagggcgtc cacatgatga tggacagcga ctggggctcg ccgtggaaag
     1861 acagcgagaa gcgttcgagc aagctcgtgt tcatcggccg caacctcgac ggcgacaatc
     1921 tcaagcgtgg tttcgaagac tgcctgaaat agccgcgtga aactcgatct cgcaaatccg
     1981 gcctggcgcc agaccctgcc cccggcgcgc acggtcacgg ccgatgcgcc cgccgccgcc
     2041 tgcgccttca gccgcgacgg cgcgaccgcg gcctttgccc tgggcgatgg cagcgtgcgc
     2101 tcgctcccgg ccgatatcgc cgcatcagcg cctgaggcca atccgccggt gcacggcggc
     2161 gcggtgctgg cgctggtcgg cgatccggcg ggcgacggct ttgtgagcgg cggcgacgac
     2221 ggccgcctgc tgcgcctcgg cgccgacggc gccgcgacgg agctcgtcaa ccagaagggc
     2281 aaatgggtcg agcaccttgc cgcccaccga accggcgcca tcgccgccgc gatcggcaag
     2341 agcgccttcg t
//
LOCUS       DASWGA010000913         3011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2385930, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000913 DASWGA010000000
VERSION     DASWGA010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2385930"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..974)
                     /locus_tag="VF991_21115"
     CDS             complement(81..974)
                     /locus_tag="VF991_21115"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9559007.1"
                     /translation="MTRLAGKVAIVTGGASGMGRATVMRFLADGAKVVVADLNEANGA
                     ETVAVAKRQGHGDSIAFVRGDVAKESDVAATVAAAEKRFGRLDIAYLNAGVGGAFGPI
                     AETSVEDWDYTFAVLTRSVFLGMKHAALAMKKHGPDGEKRGGVILVTASIAGMVGGAG
                     SHAYSAAKAAVISLIENVAAELGPDRVRVVGIAPGVVSTPLVHRGRPEKYDKQFRHQP
                     WPDRGEPDCIADVVAFLASDEARFITGETVKVDGGLLAQGIALWGTGKDNTFMKSAGV
                     NRGTTGEAMVVRNLQTGDHKK"
     gene            1063..2196
                     /locus_tag="VF991_21120"
     CDS             1063..2196
                     /locus_tag="VF991_21120"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9559008.1"
                     /translation="MKFGLFYEISIPRPWTPEKERTVYNNCLEQVKLADELGFDHVWA
                     VEHHFLEEYSHCSAPELFLTACAVLTKRIQVGHGIVVCVPEFNHPIKIAERTATLDIL
                     SGGRLHVGTGRSATWTELGGFGANPDTTKKSWDEFVRCLPKMWMQETFSYQGEFWSMP
                     ERTILPKPYQKPHPPMWVAVTSPGTEIDAADRGLGSLGLSFAGFDEQEKKIKEYRRRI
                     QSCEPVGAFVNEQVATTNFLFCHEDEKYGVEIGKKLGNTFNYLATQLISTREVFSSPS
                     YQSLGLLPALRRAATGPDASEQQTEGMAYGDPARIIRACKKWESLGVDCINFILNANE
                     VVPQDQVMASLKLFAKEVMPVFAKKPANTALSAEALSARAAAE"
     gene            2202..2972
                     /locus_tag="VF991_21125"
     CDS             2202..2972
                     /locus_tag="VF991_21125"
                     /inference="COORDINATES: protein motif:HMM:NF018066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate decarboxylase family protein"
                     /protein_id="HEX9559009.1"
                     /translation="MPLYGTLDITRKAAALPTLANLDTEAWTLPKADMLQLLIEVPRS
                     STDGLLPKAMHPALPSYVILAFTRYSESPVGPFTLAMLRLGSRAGAHPRGFMLGAVAS
                     SDAAARELRGRWGFPIESGEVKFLRRHDRVMGTVKKDGKTILDCALVDPQPVSGTDVQ
                     YINWVTAANAPLDGQTQPMLIQVDPKYTFYKAERGKPQIAVFDAAAWNAGGLKLAEPI
                     VGTCCTVDTDLPRIRFVMDPLKPVFQGTRRIRESRTDE"
BASE COUNT          518 a         1021 c          970 g          502 t
ORIGIN      
        1 gagcaccagg gcgggcgtgt tcagcgaacg gcgcgagccc tgctggccga tgagatgacg
       61 gtgaagacgc tcggcttcgc tcatttcttg tgatctccgg tttgaaggtt gcgcacgacc
      121 atggcctcgc cggtcgtgcc gcgattgacg ccggcgcttt tcatgaaggt gttgtccttg
      181 ccggtgcccc acagcgcaat gccctgcgcc aagagcccgc catcgacctt caccgtctcg
      241 ccagtgatga agcgcgcctc gtcggacgcg aggaaggcca ccacgtcggc gatgcagtcc
      301 ggctcgccgc ggtcgggcca cggctggtgc ctgaactgct tgtcgtactt ctccgggcgg
      361 ccgcgatgaa ccaggggcgt cgagaccacg ccgggcgcga tgccgaccac gcggacgcgg
      421 tcgggcccga gctcggctgc gacgttctcg atcaggctga tgacagcggc cttggccgcc
      481 gaataggcgt ggctgccggc gccacccacc atgccggcga tcgaggcggt gaccaggatc
      541 acgccgcccc tcttctcgcc atctgggcca tgcttcttca tggcgagcgc ggcgtgcttc
      601 atgcctaaaa agaccgaacg cgtcaggacg gcgaaggtgt agtcccaatc ctcgacgctg
      661 gtctcggcga tcggcccgaa ggcaccgccg actccggcat tgaggtaggc gatgtcgagc
      721 cggccgaaac gtttctcggc ggcggcgacg gtcgccgcga cgtcgctctc cttggcgacg
      781 tcgccgcgca cgaaggcgat gctgtcgccg tggccttggc gcttggcgac ggccacggtc
      841 tccgcgccgt tggcctcgtt gaggtcagcc acgacgacct tcgcgccgtc ggccaggaag
      901 cgcatcaccg tggcgcggcc catgccgctt gccccaccgg tgacgatcgc caccttgccc
      961 gccagtcgtg tcatgtcgat ttcgccctcc gatgccatgg tgctgttgcg tcgccccgcc
     1021 ggcaagccta gcgtttcgcg agggacaaga ggagacttcg gaatgaagtt cggcctgttc
     1081 tacgagattt cgatcccgcg tccgtggacg ccggaaaaag agcgcaccgt ctacaacaac
     1141 tgcctggagc aggtgaagct ggccgacgaa ctgggcttcg atcatgtctg ggcagtcgag
     1201 caccatttcc tcgaggaata ctcccactgc tcggcgcccg agctgttcct gacggcctgc
     1261 gcggtgctga ccaagcgcat ccaggtcggc cacggcatcg tggtctgcgt gccggaattc
     1321 aaccatccga tcaagatcgc tgagcgcacg gccaccctcg atatcctgtc gggcggccgc
     1381 ctgcatgtcg gcacgggccg ctcggccacc tggaccgagc tcggcggctt tggcgcgaac
     1441 cccgacacca ccaagaaaag ctgggacgag ttcgtgcgct gcctgcccaa gatgtggatg
     1501 caggagacct tctcctacca gggcgaattc tggtcgatgc ccgagcgcac catcctgccc
     1561 aagccctacc agaagccgca tccgccgatg tgggtggcgg tgaccagccc gggcaccgag
     1621 atcgacgccg ccgaccgcgg cctgggcagc cttggcctct ccttcgcggg cttcgacgag
     1681 caggagaaga agatcaagga ataccgccgg cgcatccagt cgtgcgagcc ggtcggcgcc
     1741 ttcgtgaacg agcaggtcgc caccaccaac ttcctgttct gccacgaaga cgagaaatac
     1801 ggcgtcgaga tcggcaagaa gctcggcaac accttcaact atctcgcgac gcagctcatc
     1861 tcgacccgcg aggtcttctc ctcgccgtcc taccagtcgc tcggcctgtt gccggcgctg
     1921 cgccgcgccg ccaccggccc cgacgcgtcg gagcagcaga ccgagggcat ggcctatggc
     1981 gatcccgcgc gcatcatccg cgcctgcaag aagtgggagt ccctgggcgt cgattgcatc
     2041 aacttcatcc tgaacgccaa cgaggtcgta ccgcaggacc aggtgatggc gagcctaaag
     2101 ctgttcgcca aggaagtgat gccggtgttc gccaagaagc cggcaaatac ggcgctaagc
     2161 gctgaagcgc ttagcgcccg agcggcggcg gagtagcgac catgccgctc tacggaacgc
     2221 tcgacatcac ccggaaagcc gccgcgctgc cgacgctcgc caacctcgac accgaggcct
     2281 ggacgctgcc caaggcggac atgctgcagc tcctgatcga ggtgccgaga agctcgaccg
     2341 acgggctgct gcccaaggcg atgcatcctg ccctgccgtc ctacgtgatc ctggcgttca
     2401 cgcgttattc cgagagcccg gtcgggccgt tcacgctggc gatgctgcgg ctgggcagcc
     2461 gggccggcgc gcatccgcgc ggcttcatgc tgggcgcggt cgccagcagc gacgcggcgg
     2521 ccagggagtt gcgcggccgc tggggtttcc ccatcgaatc gggtgaggtg aagttcctgc
     2581 gccgccacga tcgcgtcatg ggaacggtga agaaggacgg caagaccatc ctcgactgcg
     2641 cgctggtcga tccgcagccg gtgtcgggca ccgacgtgca atacatcaac tgggtgacgg
     2701 cggcgaacgc gccgctcgac ggccagaccc agccgatgct gatccaggtc gatcccaagt
     2761 acaccttcta caaggccgaa cgcggcaagc cgcagatcgc cgtgttcgac gcggcggcgt
     2821 ggaatgcggg tgggctaaaa ctcgccgagc cgatcgtcgg cacctgctgc accgtcgaca
     2881 ccgacctgcc acgcatccgc ttcgtgatgg acccactgaa gccggtgttt caggggacgc
     2941 ggcggatcag ggagtcccgc accgacgaat aaggtatcgt ctgttatttc agcttttctc
     3001 tctttccagc a
//
LOCUS       DASWGA010000914         3731 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2130228, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000914 DASWGA010000000
VERSION     DASWGA010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3731
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2130228"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VF991_21130"
     CDS             complement(<1..338)
                     /locus_tag="VF991_21130"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9559010.1"
                     /translation="MPDVTAANPDVATPELMKAISAAFNSRDVDRIVSHFTDDATFCL
                     ARGPEPVGRTLKGKETIRKTLAARFKVIPDMRWDHKEYIFAANRAVSVWTVKGKGADG
                     EELNYQGCDI"
     gene            complement(468..998)
                     /locus_tag="VF991_21135"
     CDS             complement(468..998)
                     /locus_tag="VF991_21135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559011.1"
                     /translation="MKRTLVTLALMAAAGTAGAQTVTTPSVGGATVTPPSVGPGTVTT
                     PPASPPAVSTPAVPSRSVGAAGATVTTPPVSGGAVTPPATGAARVTTPGVNPPSVSTP
                     GVPSRSVSAPDTANAPAIPNAKGSANAQAKIKADGYTNVQGLSRNRDGSWSGKAMRGS
                     TTVDVGVDARGNVITK"
     gene            1144..2847
                     /locus_tag="VF991_21140"
     CDS             1144..2847
                     /locus_tag="VF991_21140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014440068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX9559012.1"
                     /translation="MYDYIIVGGGSAGSVMAHRLSAKSANKVLLCEAGQDTPPGKEPP
                     EITDSYSGTAYFDPRFHWTELKVHTQVVSHNNPQENRPPLRKYEQARVLGGGSSINGQ
                     MANRGAPTDYAEWANRGAIGWGWNDVLPYFKKVERDLDFDGPLHGKDGRIPVRRIPPE
                     HWTGHAKAVAEGFAAKGYKFLPDQNGEFVDGYFPVTHSNAEERRVSAAMGYLDAETRT
                     RANLTISTDTQVKSLLFEGARCVGVTAMVAGHEQEFRAREVILSSGAIHSPAHLMRAG
                     IGPAGHLSELGIPVVAALPGVGQRLMDHPSIALSSFIRRGARMNQHTRRHIHLGLRYS
                     SNLPGVPKGDMFVAVISKSAWHAVGEQIASLLTFINKTYSETGQVRLASCDYRSEPVV
                     EFNLLSDKRDLDRLMSGFKLMAAVQMTDALKNVTDAPFPAAYSDRVRAIGVVNTKNRI
                     LTSIVAQCLEGPAALRRFMIDKFVVEGFTFDQVMTDDEALEAFVRKSAIGVWHASCTC
                     RMGEADDPMSVVDTQGRVKGVQGLRVVDASVFPVVPCANTNFPTLMTAEKISAAMTLS
                     S"
     gene            2867..>3731
                     /locus_tag="VF991_21145"
     CDS             2867..>3731
                     /locus_tag="VF991_21145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEX9559013.1"
                     /translation="MSVILGSGEHRYRVVENWAKLPDGWEFRDVAAVAVDSKDRIYVF
                     NRGQHPMIVFDRDGNFLRSWGEGLFSRAHGIHVDSDDNLYCTDDGDHTVRKMSTEGKV
                     LMTIGVPNQPAPFLSGKLFNRCTHTALSPKGEIYVSDGYGNSCVHKYSPDGKHLMCWG
                     TTGTDPGQFNIAHNIATDDDGWVYVADRENHRVQVFDGNGKYELQWNNMHRPCALYCC
                     AGGGKNPQFIIGELGPGMRVNSKHTNIGPRLAIVDKKGGLIARLGGEHGPGQETGRFL
                     SPHGLAVDSKGD"
BASE COUNT          641 a         1244 c         1237 g          609 t
ORIGIN      
        1 tagatgtcgc agccctggta gttcagctcc tcgccgtcgg cgcccttgcc tttcaccgtc
       61 cataccgaga ccgcgcggtt ggctgcgaag atgtactcct tgtggtccca gcgcatgtcg
      121 gggatcacct tgaagcgcgc ggccaaggtt ttgcggatcg tttccttgcc cttgagcgtg
      181 cggccgaccg gctcgggccc gcgcgccagg cagaacgtgg cgtcgtcggt gaaatgcgag
      241 acgatgcggt cgacgtcgcg actgttgaag gcggcggaga tcgccttcat gagctccggc
      301 gtggcgacat cgggatttgc ggctgtgacg tccggcatac gaaacctccc gcgctgcaat
      361 ggagcgaacg attgcaggcc tgacgcctgg cggcaagtcg gacgcagaaa cccgccccgt
      421 cttgcgacag ggcgggttcg agctgagctg agggcggacg ggttggacta tttggtgatc
      481 acgttgccac gggcgtcgac gccgacgtcg accgtggtgc tgccgcgcat cgccttgcca
      541 ctccagctgc cgtcccgatt gcggctcaga ccctggacgt tcgtgtagcc gtccgccttg
      601 atcttggcct gggcgttggc ggagcctttg gcattgggta tcgccggggc gttggccgtg
      661 tccggcgcgc tgaccgaccg cgagggtacg cccggggtgc tgacgctcgg cggattgacg
      721 cccggcgtgg tcacgcgggc ggcgccagtc gccggaggcg tcaccgcacc gccgctgacc
      781 ggcggggtgg tcacggtcgc gccggccgcg ccgactgacc gcgagggaac ggccggcgtg
      841 ctgaccgcag gcgggctggc cggcggcgtc gtcacggtac cgggtccgac cgacggtggg
      901 gtgacggtgg cgccgcccac cgacggcgtg gtgacggtct gggctccggc ggtaccggca
      961 gcggccatga gggccagggt cacaagggta cgcttcatca gagtgcctcc tctctgcttt
     1021 gggcactgac gaaacgccgg agtaggagga gcgttgcgcc tcgcaaatct tggtttcgcc
     1081 acattggccc gcaggcgtgc tagcgtccga caacaaacga gaccaacaac tgaggaaacg
     1141 cccgtgtacg actacatcat cgtcggcggc ggctcggccg gctcggtcat ggcccaccgg
     1201 ctgtcggcta aaagcgccaa caaggtgctg ctgtgcgagg ccggccagga cacgccgccg
     1261 ggcaaggaac cgcccgagat caccgacagc tattccggca ccgcctactt cgatccgcgc
     1321 tttcactgga ccgagctgaa agtccacacc caggtcgtgt cgcataacaa tccgcaggag
     1381 aaccgcccgc cgctgcgcaa gtacgagcag gctcgcgtgc tgggcggcgg ctcgtcgatc
     1441 aacggccaga tggccaatcg cggtgcgccc accgactacg ccgaatgggc caaccgcggc
     1501 gccatcggat ggggctggaa cgacgtgctg ccctatttca agaaggtcga gcgcgacctc
     1561 gacttcgacg ggccgttgca cggcaaggac ggccgcatcc ccgtgcgccg catcccgccc
     1621 gagcactgga ccggccacgc caaggcggtg gccgagggct tcgcggccaa gggctataaa
     1681 ttcttgcccg atcagaacgg cgaattcgtc gacggttatt tcccggtcac gcattcgaac
     1741 gccgaggagc ggcgcgtgtc ggcggcgatg ggctatctcg atgccgaaac gcgcacgcgc
     1801 gccaacctca cgatctcgac cgacacccag gtgaagtcgc tgttgttcga gggcgcgcgc
     1861 tgcgtcggcg tcaccgccat ggtggcgggc cacgagcagg agttccgcgc ccgcgaggtc
     1921 atcctgtcgt cgggcgccat ccattcgccg gctcatctta tgcgcgccgg catcggcccg
     1981 gcgggacatc tgagcgagct cggcatcccc gtggtcgccg ccctgccggg cgtcggccag
     2041 cggctgatgg accatccctc gatcgcgctg tcgtccttca tccgccgcgg cgcgcgcatg
     2101 aaccaacaca cgcgccgcca catccatctc ggcctgcgct actcctccaa cctgcctggc
     2161 gtgccgaaag gcgacatgtt tgtcgcggtg atcagcaagt cggcctggca tgcggtcggt
     2221 gagcagatcg cctcgctgct caccttcatc aacaagacct actccgagac cggccaggtc
     2281 aggctggcgt cgtgcgatta ccgaagcgag ccggtggtcg agttcaacct cttgtccgac
     2341 aagcgcgacc tcgaccggct gatgagcggc ttcaagctga tggcggcggt gcagatgacc
     2401 gacgcgctga agaacgtgac cgacgccccc ttccctgccg cctacagcga tcgcgtgcgc
     2461 gcgatcggcg tggtcaacac caagaacagg atcctgacca gcatcgtggc gcaatgcctc
     2521 gaaggaccgg ccgcgctgcg ccgcttcatg atcgacaagt tcgtggtcga aggcttcacc
     2581 ttcgaccagg tgatgaccga cgacgaggcg ctcgaggcct ttgtgcgcaa gtcggcgatc
     2641 ggcgtgtggc acgcctcctg cacctgccgc atgggcgagg ccgacgatcc gatgtcggtg
     2701 gtcgacaccc agggacgcgt caagggcgtg caagggctgc gcgtcgtcga tgcctcggtg
     2761 tttccggtgg tgccttgcgc caacaccaat ttcccgacgc tgatgacggc ggagaagatt
     2821 tcggcggcga tgacattgtc gtcctgagcg acagaaagga taagagatgt cagtcattct
     2881 aggcagcggc gagcatcgct atcgcgtggt cgagaactgg gcgaagctgc ccgacggctg
     2941 ggagttccgc gacgtcgcgg cagtggccgt cgacagcaag gaccgcatct atgtcttcaa
     3001 tcgcgggcag catccgatga tcgtgttcga ccgcgacggc aacttcctgc gctcgtgggg
     3061 cgaagggctg ttcagccgcg cccacggcat ccatgtcgac agcgacgaca acctctactg
     3121 caccgacgac ggcgaccata cggttcgcaa gatgagcacc gagggcaagg tgctgatgac
     3181 catcggcgtg cccaaccagc ccgccccctt cctgagcggc aagctgttca accgctgcac
     3241 ccacaccgcg ctctcgccca agggcgagat ctacgtttcc gacggctacg gcaattcctg
     3301 cgtccacaag tattcgccgg acggcaagca cctgatgtgc tggggcacca ccggcaccga
     3361 tccgggccag ttcaacatcg cccacaacat cgccaccgac gatgacggct gggtctatgt
     3421 cgccgaccgc gagaaccatc gcgtccaggt gttcgacggc aacggcaagt acgagctgca
     3481 gtggaacaac atgcaccgcc cttgcgcgct ctattgctgc gccggcggcg gcaagaaccc
     3541 ccagttcatc atcggcgagc tggggcccgg catgcgcgtc aacagcaagc acaccaacat
     3601 cggtccgcgc ctcgcgatcg tcgacaagaa gggcggcctg atcgcgcggc tgggcggcga
     3661 gcacggccct gggcaggaga ccggccgctt cctgtcgccg cacggcctcg cagtcgacag
     3721 caagggcgac a
//
LOCUS       DASWGA010000915         2987 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_475483, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000915 DASWGA010000000
VERSION     DASWGA010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2987
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475483"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VF991_21150"
     CDS             complement(<1..423)
                     /locus_tag="VF991_21150"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX9559014.1"
                     /translation="MKIISWNLLRLTGAAVEDVGALLGREKPDVLLMQEATQHIEALP
                     SLVGGHFHRLSWLGRVHGLAVWSPHRFAQPRALSLPASRLPGRLPRRRAQLVQVGDIT
                     FANVHLSHGQLLNRRQLVRIAGALRGRPSAIVGDYNAVG"
     gene            complement(431..2236)
                     /locus_tag="VF991_21155"
     CDS             complement(431..2236)
                     /locus_tag="VF991_21155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX9559015.1"
                     /translation="MAGTNELFVFKDVLILLGTAAVVAPVVHRLKISPVLGFLLVGAT
                     LGPHGLGRLAEHSRAIDWFTVTGERQIAFIADLGIVFLLFFIGLELSMRRLLTMRRLV
                     FGLGGLQIFLAALAIGLGALWLGQPGAAALIIGFCLALSSTAIVMELLSGQRRMMSAT
                     GRTSFAVLLAQDLAVVPLLFLIGVLGGHEEGSSVVQGAVVAVVEAALAIGAIAVVGRV
                     VLKPLFRLAAGTDNPEFFMAATLLISVGSGVVAAYAGLSMALGAFIAGLLLAETEYRR
                     AVEAMIDPFRGLLLGVFFFSVGMHIDLGFIWHQPLLVAAAFVGMIVAKTVLLAPLCRL
                     FGVPWAASVETSLLLAPGGEFAFIGIGLAAQVGLVAGDVAAGVLAVVSLTMATLPFVA
                     LFARRAGHAFAKQASSDPLFTVLPPDDHARRVIVVGHGRVGQLVCDLLEKHAIAYIAC
                     DRDTVLVERWRRLGRPLYFGDASNPLFLRRCGVDEAVGVIVTLDTAAVDDVVKAVRAR
                     RPDVMIVARAHDAQHARHLYTLGVTDTVPETIEASLQLAESALVGLGVPMGLVIASIH
                     ERRETVRRELQAAAGSAAVLTEQIRQARRDRAARP"
     gene            2356..>2987
                     /locus_tag="VF991_21160"
     CDS             2356..>2987
                     /locus_tag="VF991_21160"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX9559016.1"
                     /translation="MKVVITGGAGFLGKKLARRLLQGSIASPDGKAERVSELVLFDVG
                     KASGPGLDDQRVKTVAGDIANFATVQSIVQGAATVFHFAAVVSAGAEADFDLGYRVNL
                     DGTRNVLESCRALGSNPRVVFTSSLAAYGGDLPKAVTDDTPLTPQTSYGSQKSIGEFL
                     IRDYTRKGFLRGTAVRLPTICVRTGLPNKAASTWASSVVREPLTGVDVVCP"
BASE COUNT          547 a         1016 c         1056 g          368 t
ORIGIN      
        1 gccgacggcg ttgtagtcgc cgacgatcgc cgagggccgg ccgcgcaggg cgccggcgat
       61 gcgcaccagc tggcggcggt ttaaaagctg gccgtggctg agatggacgt tggcgaaggt
      121 gatgtcgccc acctgcacga gctgggcacg ccggcgcggc aggcggccgg gcaggcgcga
      181 cgccggcagc gacagcgcgc gcggctgggc gaagcggtgc ggactccaca cggcgagccc
      241 gtgcacgcgg ccgagccacg acagccggtg gaagtggccg ccgaccagcg acggcagcgc
      301 ctcgatgtgc tgcgtcgcct cctgcatcag cagcacatcc ggcttctcgc gtccgagcag
      361 cgccccgacg tcctcgacag ccgcgccggt gaggcgcagc aggttccagc tgatgatttt
      421 caagcgctcc tcatggtctg gcggcgcggt cgcgccgcgc ctggcggatc tgctcggtga
      481 gcaccgcggc gctgccggca gccgcctgca actcgcgccg gacggtctcg cgccgctcgt
      541 ggatggaggc gatcaccagg cccatcggca cgcccaaccc aacgagcgcc gactcggcaa
      601 gttgcaggct cgcctcgatc gtctccggca ccgtatcggt gacgccgagc gtgtagagat
      661 ggcgggcgtg ctgggcgtcg tgggcgcgcg ccacgatcat cacgtcgggc cgccgcgcgc
      721 ggaccgcctt caccacgtca tcgacggcgg ccgtgtcgag ggtgacgatc acgcccaccg
      781 cctcgtcgac gccgcagcgc cgcaggaaaa gcgggttgga tgcatcgccg aagtagagcg
      841 gccggcccag gcggcgccaa cgctccacca ggacggtatc gcgatcgcag gcgatgtagg
      901 cgatggcgtg cttctccaga aggtcacaga cgagctggcc caccctgccg tggccgacga
      961 cgatgacacg cctggcatga tcgtccggcg gcagcacggt gaagagcgga tcggacgagg
     1021 cttgcttggc gaaggcgtgt ccggcgcggc gggcgaacag ggcgacgaag ggcagcgtcg
     1081 ccatggtcag cgacaccacg gccaggacgc ctgccgcgac gtcgcccgcc accagaccga
     1141 cctgggcggc aaggccgatg ccgatgaaag cgaattcgcc gcccggcgcc agcagcaggc
     1201 tggtttcgac actggccgcc catggcacgc cgaacagccg gcagagcggg gcgagcagca
     1261 cggtcttggc cacgatcatg ccgacaaatg ccgccgccac caagagcggc tggtgccaga
     1321 tgaagccgag atcgatgtgc atgccgaccg agaaaaagaa gacaccgagc agcaggccgc
     1381 ggaacggatc gatcatcgcc tcgaccgcgc gacgatactc ggtctcggcc agcagcaatc
     1441 cagcgatgaa ggcgccgagc gccatcgata ggccggcata ggccgcgacc acgcccgagc
     1501 cgaccgagat cagcagggtg gcggccatga agaattccgg gttgtcggtg ccggcggcca
     1561 ggcggaacag cggcttcagc acgacccgcc cgacgacggc gatcgcaccg atcgcgaggg
     1621 cggcctcgac caccgccacg acggcgcctt ggaccaccga agatccttcc tcgtgcccgc
     1681 cgagcacgcc gatcaggaaa agcagcggga ccaccgccag gtcctgggcg agcaggacgg
     1741 cgaagctggt gcggccggtc gccgacatca tgcgacgctg accggacagc agctccatga
     1801 cgatggcggt cgaggacagc gccaggcaga agccgatgat cagcgccgcc gcccccggct
     1861 ggccgagcca cagcgcgccg aggccgatgg cgagggcggc gaggaagatc tgcagcccgc
     1921 ccaggccgaa caccaggcgg cgcatggtga gcaggcgccg catcgacagt tcgagcccga
     1981 tgaagaacag caggaagaca atgcccaggt cggcgatgaa ggcgatctgc cgctcgccgg
     2041 tgacggtgaa ccagtcgatg gcgcgcgaat gctcggccag ccggcccagc ccatgcgggc
     2101 cgagcgtggc cccgacgagg aggaaaccga gcaccggact gatcttgagg cggtgcacca
     2161 ccggcgccac gaccgccgcc gtgccgagca ggatcaggac gtccttgaag acgaagagtt
     2221 cgttcgttcc cgccattgca cgcaacatag actgcgaacg ccgatctgtg cacactttac
     2281 atcggcgggg aaaaattggc ccagaggcaa agggcccaga gaccaagggc ccagaggcaa
     2341 agggatggag acgacatgaa ggtggtgatc accggcggtg cgggcttcct cggcaagaag
     2401 ctggcgcgac gcctcctgca aggctcgatc gcaagcccgg acggcaaagc cgaacgcgtg
     2461 agcgagctcg tgttgttcga cgtcggcaag gcgagcggac cggggctcga cgatcagcgg
     2521 gtcaagactg tcgccggcga catcgccaac ttcgccacgg ttcaatcgat cgtgcagggc
     2581 gccgccacgg tgttccattt cgccgcggtc gtcagcgccg gcgccgaggc ggatttcgac
     2641 ctcggctacc gggtcaatct cgacggcacg cgcaacgtgc tggagtcctg ccgcgcgctc
     2701 ggcagcaatc cgcgcgtggt gttcacctcc tcgctggcgg cctatggcgg cgacctgccg
     2761 aaggcggtga ccgacgacac gccgctcacg ccgcagacgt cgtacggctc ccagaagtcg
     2821 atcggcgagt tcctgatccg cgactacacg cgcaagggat tcttgcgcgg cacggccgtg
     2881 cggttgccga cgatctgcgt gcgcaccggc ctgcccaaca aagccgcttc gacctgggcg
     2941 agctcggtgg tgcgcgagcc gctgaccggc gtcgacgtcg tctgccc
//
LOCUS       DASWGA010000916         2232 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1757745, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000916 DASWGA010000000
VERSION     DASWGA010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1757745"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..397
                     /locus_tag="VF991_21165"
     CDS             <1..397
                     /locus_tag="VF991_21165"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9559017.1"
                     /translation="TPEWQVFGGYAYLDGRIIDGVGAGTTGMVPLNTPRDSANIWTTY
                     TFKETYEIGGGVTYIGQRYANNTNTVQVPDFARVDLTAAYRQPTYDLRLNVFNLLNTM
                     YYEQVIASDGGRAVAGSGLTAMLTYTHRL"
     gene            401..1084
                     /locus_tag="VF991_21170"
     CDS             401..1084
                     /locus_tag="VF991_21170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016706 - 2-oxoglutarate-dependent
                     dioxygenase activity [Evidence IEA];
                     GO_function: GO:0031418 - L-ascorbic acid binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-dependent dioxygenase"
                     /protein_id="HEX9559018.1"
                     /translation="MLVCVPSVLDAAQLVSLRERLDRANAWVDGRVTAGYQGAPVKFN
                     QQIDERSEVALACQRIVVSALERHPIFISAVLPNTIYPPMFNRYSEGMKFGAHVDGSV
                     RLHPHDGRKLRTDVSATLFLTNPDDYDGGELQVEDTYGRHSVKLAAGDMVVYPATSLH
                     QVAPITRGVRTACFFWVQSLIRDDVKRALLYEMDSAIQRLNQTNADEIARRSLIGCYH
                     NLVRQWSET"
     gene            1084..1767
                     /locus_tag="VF991_21175"
     CDS             1084..1767
                     /locus_tag="VF991_21175"
                     /inference="COORDINATES: protein motif:HMM:NF027675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HEX9559019.1"
                     /translation="MADAAATTLTSNRINRRQAFVRWLRRTHGWFGLWGAILGLLMGF
                     SGIWLNHRTVLKLQLPDQQQINAQLELTDPRPATIDALAAWLQQALTLDRPASNMRVE
                     RSRPVAWSEKGAGEGRPLTQPERWTLSFGGPDKVIQVEYWVGNKSVGVRTTENGFVAT
                     LTNLHKGVGMPVPWILLIDSLAGSLIFLSLSGAVLWWETNRRRLVGLAIFGISVTVTA
                     VIAMSPLQW"
     gene            1801..>2232
                     /locus_tag="VF991_21180"
     CDS             1801..>2232
                     /locus_tag="VF991_21180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559020.1"
                     /translation="MPRLGGEITAAYREPLTPTVKRALLALVIFFHVGGGWALTQVEP
                     AKLVVGDIAPMEVRMVAAEQPAQPDLPFEEPPPPPDLKPPPPELATVVEPPPTDLPPP
                     VFPIEAPPPRPPEPQKPKPPPKPVQRPPSTPQAPVDAQPQQA"
BASE COUNT          391 a          789 c          713 g          339 t
ORIGIN      
        1 cacgccggaa tggcaggtgt tcggcggcta tgcctatctc gacggccgca tcatcgacgg
       61 cgtcggcgcc ggcacgacag gcatggtgcc gctcaacacg ccccgcgact cggccaacat
      121 ctggacgacc tacaccttca aggaaaccta cgagatcggc ggcggcgtca cctatatcgg
      181 ccagcgctac gccaacaaca ccaacaccgt ccaggtgccg gacttcgccc gcgtcgacct
      241 gacggcagcc taccggcagc cgacctacga cctgcgcctc aacgtcttca acctgctcaa
      301 cacgatgtac tacgagcagg tcatcgcctc ggacggcggc cgcgcggtcg ccggctcggg
      361 cctgacggcg atgctgacct acacccaccg tttgtaagcc atgctggtct gcgttcccag
      421 cgttctcgat gccgcgcaac tggtgagcct gcgcgagcga ctcgaccgcg ccaacgcgtg
      481 ggtcgacggt cgcgtcaccg ccggctacca gggcgcaccg gtgaagttca accagcagat
      541 cgacgagcgc tccgaggtgg cgctcgcctg ccagcgcatc gtcgtgtcgg cgctcgagcg
      601 ccacccgatc ttcatcagcg ccgtgctgcc caacacgatc tacccgccga tgttcaaccg
      661 ctacagcgaa ggcatgaaat tcggcgccca tgtcgacggc agcgtgcggc tgcatccgca
      721 cgacggccgc aagctcagga ccgatgtgtc ggccacgctc tttctcacca atcccgacga
      781 ctacgacggc ggcgagctgc aggtcgagga cacctacggc cggcacagcg tcaagctggc
      841 ggcgggcgac atggtggtct acccggccac cagcctgcac caggtggcgc cgatcacgcg
      901 cggcgtgcgc acggcctgct tcttctgggt gcagagcctg atccgcgacg acgtcaagcg
      961 ggcgctgctc tacgaaatgg acagcgccat ccagcgcctc aaccagacca atgccgacga
     1021 gattgcgcgg cgaagcttga tcggctgcta tcacaacctc gtcaggcagt ggagcgagac
     1081 ctgatggccg atgctgccgc cacgacgctg accagcaacc ggatcaaccg gcggcaggcg
     1141 ttcgtgcgct ggctgcgccg cacgcacggc tggttcgggt tgtggggcgc gattctcgga
     1201 cttctgatgg gcttcagcgg tatctggctc aatcatcgca ctgtcttgaa gctgcagttg
     1261 cccgaccagc agcagatcaa cgctcagctc gagctgaccg acccgcggcc cgcgacgatc
     1321 gacgccctgg ccgcttggct ccagcaggcg ctcacgctcg atcgcccggc cagcaacatg
     1381 cgggtcgagc gctcgcgccc cgtggcatgg tcggaaaagg gggccggcga gggccggccg
     1441 ctgacgcagc ccgaacgctg gacgctcagt ttcggcggac cggacaaggt catccaggtc
     1501 gagtactggg tcggcaacaa atcggtcggc gtgcggacca cggagaatgg cttcgtcgcg
     1561 accttgacca atctgcacaa gggcgtgggc atgccggtgc cgtggatcct gctgatcgac
     1621 agcctggcgg gcagcctgat cttcctgtcg ctgagcggtg ctgtcctgtg gtgggaaacg
     1681 aaccgccggc gtctcgtcgg gctagcgatc ttcggcatat cggtgacggt gacggcggtg
     1741 atcgcgatgt cgccgctgca gtggtaagca agctccgtga gcgagcaatc cacgcctctg
     1801 atgccacgcc tcggcggcga gatcaccgca gcctacaggg agccgctgac gccgaccgtg
     1861 aagcgcgctc tgctggcgct ggtgatcttc ttccatgtcg gcggcggctg ggcactgacc
     1921 caggtcgagc cggcgaagct cgtggtcggc gacatcgcgc ccatggaagt gcgcatggtc
     1981 gcggccgagc agccggcgca acctgacctg ccgttcgagg aaccaccccc gccgcccgac
     2041 ttgaaaccac cgccgccgga actcgccacg gtggtcgaac cgccgccaac cgatctgccg
     2101 ccgccggtct ttccgatcga ggcgccgcca ccgcggccgc ctgaaccgca aaagcccaag
     2161 ccgccgccga agccggtgca gcggccacct tcgacgccgc aagcacccgt cgatgcccag
     2221 ccgcagcagg cg
//
LOCUS       DASWGA010000917         2299 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1121344, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000917 DASWGA010000000
VERSION     DASWGA010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1121344"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2299)
                     /locus_tag="VF991_21185"
     CDS             complement(<1..>2299)
                     /locus_tag="VF991_21185"
                     /inference="COORDINATES: protein motif:HMM:NF015737.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HEX9559021.1"
                     /translation="IGLTGSGGLTKTGGGALFLTGASTYTGGTTVSGGLINFAAANNF
                     GSGAITLDGGGLQWSTGNTADISARLAPLGAGGGTIDTNGNVVRFATGLTGSGGLTKT
                     GGGALFLTGANTYTGGTTVNNGILHIGAEGGPAGSIVGTATVNGADSHLAFLSTSSAG
                     NLAVTLNGGTMHFFGDSTAANATITANAGSTAFVQDRGSGGQARFIINGGGTFDISPL
                     AIAGTTAGSIEGAGSFRLGGKQLSVGANNLSTTVSGVLADGGLNGGSGGSLVKVGTGT
                     LTLAGNNTYSGGTTLNAGGLVVNGSLASGVTVNAGTLSGSGTIGGLVLNGGIVAPGNS
                     IGTLTVNGSFVQNAGSVYQVEANSAGQSDRINVNGPATINGASVQVLAQSGTYARNTT
                     YTILSATAGVTGAYSGVSSNFAFLTPSLSYDANNVYLLLFQKAGAFAAGAQTPNQYAV
                     GTALDQVNATTTGDFGAVLNALSVLSTQQGPAALNAISGQQYADFGTLNVQSGALFMN
                     TVAQQMAVARGGAGGGQRQALAQACEIASCDAASPWSAWASALGGLGTVAGNGNSSTL
                     TYNFGGGAAGVDYRVDPRFLVGLSAGYAAGNQWVDSFMGRGWTDSVSVMAYGSFTQAG
                     FYADALAGYAWSGNQMQRQILIAGLQPRTANGSTGANQFLGQVETGYRLPVFAPASAS
                     VTPFARLQGSTVNQNAFSEWGANSLSLNVAQQTTNSLRTTFGADLAGAIGLSDARKLD
                     LALRLGWLHDYADTGRPITAAFAGAP"
BASE COUNT          310 a          778 c          832 g          379 t
ORIGIN      
        1 ggcgcgccgg cgaaggccgc cgtgatcggc cggccggtgt cggcatagtc atgcagccag
       61 cccagccgca gcgcgagatc gagcttcctg gcgtcgctga gtccgatcgc gcctgcgagg
      121 tcggcgccga aggtcgtgcg cagcgagttg gtcgtctgct gcgccacgtt gaggctgagc
      181 gagttggcgc cccattcgga gaaggcgttc tggttgacgg tcgaaccctg cagacgggcg
      241 aacggcgtga cgctcgccga cgccggcgcg aacaccggca gccgatagcc ggtctcgacc
      301 tggcctaaaa actggttggc gccggtgctg ccgttggcgg tgcgtggctg caggccggcg
      361 atcaggatct ggcgctgcat ctggttgccc gaccaggcgt agcccgccag cgcatcggca
      421 tagaagcccg cctgcgtgaa gctgccgtag gccatgacgc tgacgctgtc ggtccagccg
      481 cggcccatga agctgtcgac ccactggttg ccggcggcgt agccggcgct gaggccgacg
      541 aggaagcgcg ggtcgacgcg atagtcgacg cccgccgcgc cgccgccgaa gttgtaggtg
      601 agcgtcgagc tattgccgtt gccggcgacc gtgcccagcc cgcccagcgc gctcgcccag
      661 gcgctccatg ggctcgctgc atcgcagctc gcgatctcgc aggcctgggc cagcgcctgg
      721 cgctggccgc cgcccgcgcc gccgcgcgcc accgccatct gctgggcgac cgtattcatg
      781 aacagcgcgc cgctctggac attgagcgtg ccgaagtcgg cgtactgctg gccgctgatg
      841 gcgttcagcg ccgccgggcc ctgctgcgtg ctgaggacgc tgagcgcatt cagcacggca
      901 ccgaaatctc cggtggtggt cgcgttgacc tgatcgagcg cggtgccgac ggcgtactgg
      961 ttgggcgtct gcgcgccggc ggcgaaggcg cccgccttct ggaacagcag cagatagacg
     1021 ttgttggcgt cgtagctgag gctgggcgtc aggaaggcga agttgctgct cacgcccgaa
     1081 taggcgcccg tcaccccggc ggtggcgctc aggatcgtgt aggtcgtgtt gcgcgcatag
     1141 gtgccgctct gcgccagcac ctgcaccgaa gcgccgttga tggtggcagg gccgttgacg
     1201 ttgatgcggt cgctctggcc ggcgctgttc gcctcgacct gatagacgct gccggcgttc
     1261 tgcacgaagc tgccgttcac cgtcagcgtg ccgatcgagt tgcccggcgc cacgatgccg
     1321 ccgttgagga cgaggccgcc gatagtgccg ctgccgctga gggtgcccgc gttcaccgtg
     1381 acgccgctcg ccaggctgcc gttcaccacc agcccgccgg cattgagcgt cgtgccgccg
     1441 ctgtaggtgt tgttgccggc aagcgtcagc gtacccgtgc cgaccttgac cagtgagccg
     1501 ccgctgccgc cattgagacc gccatcggcc aagacaccgc tcactgtggt cgagaggttg
     1561 ttggcgccga cgctaagctg cttgccgccg agccggaagg atcccgcgcc ctcgatcgat
     1621 cccgccgtgg tgccggcgat cgccagcggt gaaatgtcga acgtgccgcc gccattgatg
     1681 atgaagcgcg cctgcccgcc gctgccgcgg tcctgcacga acgccgtcga tcccgcattg
     1741 gcggtgatgg tggcgttggc ggcggtgctg tcgccgaaaa agtgcatggt cccgccattg
     1801 agggtgacgg cgaggttgcc ggccgagctc gtcgacagga aggcgagatg gctgtcggcg
     1861 ccgttgaccg tcgctgtccc cacgatcgag cccgccggcc cgccctccgc gccgatatgc
     1921 aggatgccgt tattgaccgt ggtgccgccg gtgtaggtgt tggcgccggt caggaacagc
     1981 gcgccgccgc cggtcttggt gaggccgccg ctgcccgtga gcccggtcgc gaaccgcacg
     2041 acgttgccgt tggtgtcgat ggtgcccccg ccggcgccga gcggcgccag ccgcgcggaa
     2101 atgtcggcgg tgttgccggt cgaccattgc aggccgccgc cgtccagcgt gatcgcaccg
     2161 ctaccgaaat tgttggctgc ggcgaagttg atcaggccgc ccgagacggt ggtgccgccg
     2221 gtgtaggtgc tggcgccggt caggaacagc gcgccgccgc cggtcttggt gaggccgccg
     2281 ctgcccgtga gcccgatcg
//
LOCUS       DASWGA010000918         2463 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2009047, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000918 DASWGA010000000
VERSION     DASWGA010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2463
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2009047"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1100
                     /locus_tag="VF991_21190"
     CDS             <1..1100
                     /locus_tag="VF991_21190"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9559022.1"
                     /translation="TANTVERLTAAGMVPLGKLHMVEFAFGGWGTNPLMGAPWNPWDL
                     ATHRVPGGSSSGTGVAVAARLAPAGIGSDTGGSVRIPAAFNGLVGLKVTFGRIGLSGT
                     MLLSWTLDSIGPMARCVEDCASMLNALAAPDPRDPTTLGQPLEDFTLATQPGSIEGMR
                     VAIPDTKQLPAFMHADVTKAWQAAGRTFESLGATVEAVRLPNWYFDLSRPAGTIIASE
                     AYALHRDHIENLGQAIGPGVRMRAQTAKSFLPGAYAEELRIMAERRRAFTDWVKPYDA
                     ILLPTMAVPAIPLAEVDEASPIPGYLTRPANYLGLCSLAMPSGQSGGLPIGIQIVGKP
                     FAERDVLRLGKAFQDATDYHRRAPDLSALSL"
     gene            complement(1121..2059)
                     /locus_tag="VF991_21195"
     CDS             complement(1121..2059)
                     /locus_tag="VF991_21195"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9559023.1"
                     /translation="MTGRNGNLGASRASAQAADFAALPQLARRLGVTFEDPRPPRHLT
                     LIGAGGIRLHGLDWGGDGPPALFLHGGRLTARTWDYVCLGMRGQIRAVALDMRGHGDS
                     DWADDYTLDARVADVGAVLDELGWSTAHLVGMSLGGFTAAHFAAANPHRVASLVTVDV
                     GPGVVFEATAGMRGFFQEIQASDGPETVVDAAMQISSLSDRERVAYRMAAILRLTESG
                     DWAWAFDNRRPTDYPTLLAKVEDMAAAAERLAAPCLVVRGGRSQIFSDEAAARFAAHF
                     ATGEWVVVPDAGHNVQEDNPAGLIAALTQFWSRHAR"
     gene            2074..>2463
                     /locus_tag="VF991_21200"
     CDS             2074..>2463
                     /locus_tag="VF991_21200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9559024.1"
                     /translation="MATKATKRIRRSPEASKLAILEAAERRLIKDGPDGVRVQRIAAD
                     LGMTDAALHYHFGNREALVKALMRFSAKRLVDDIGSALEAWDVDRLDLHQLGALFRKS
                     YAERGVARLVLSVLAGRRPRGAGMLRRL"
BASE COUNT          388 a          868 c          830 g          377 t
ORIGIN      
        1 agaccgccaa cacggttgaa cgcctgaccg cggccggcat ggtgccgctc ggcaagctgc
       61 acatggtcga gttcgccttc ggcggctggg gcaccaatcc cctgatgggc gcgccgtgga
      121 atccctggga cctcgcgacc catcgcgtgc ccggcggctc ctcgagcggc accggggtgg
      181 ccgtcgccgc ccgcctggcg ccggccggca tcggcagcga caccggcggc tcggtgcgta
      241 tcccggcggc gttcaacggc ctggtcggcc tgaaagtcac gttcggccgc atcgggctct
      301 ccggcacgat gctgttgagc tggacgctcg attcgatcgg cccgatggcg cgctgcgtcg
      361 aggactgcgc gtcgatgctg aatgcgctgg ccgcgcccga cccgcgcgat ccgacgacgc
      421 tcggccagcc gctggaagat ttcaccctcg ccacccagcc gggctcgatc gaaggcatgc
      481 gcgtggccat ccccgacacc aaacagctgc cggcgttcat gcatgccgac gtgaccaagg
      541 cttggcaggc cgccggccgc accttcgaga gcctgggcgc cacggtcgag gcggtgcgcc
      601 tgcccaactg gtatttcgat ctgtcgcggc cggccgggac catcatcgcc tcggaggcct
      661 acgcgctgca ccgcgaccac atcgagaacc tcggccaggc gatcggcccc ggcgtgcgta
      721 tgcgcgcgca aaccgccaag agcttcctgc ccggcgccta tgccgaggag ctgcgcatca
      781 tggccgagcg ccggcgggcc ttcaccgact gggtcaagcc ctacgatgcg atcctgctgc
      841 cgaccatggc cgtgccggcg atcccgctcg ccgaggtcga cgaggcctcg ccgatcccgg
      901 gctatctcac gcggccggcc aactatctcg gcctgtgcag ccttgccatg ccgtccggcc
      961 agtcgggcgg attgccgatc ggcatccaga tcgtcggcaa gccgttcgcc gaacgtgacg
     1021 tgctgcgatt gggcaaggcc ttccaggacg cgaccgacta ccaccgccgc gcgcccgatc
     1081 tttcggcgct gagcctctag gggcgacaag acttggctgt ctatctggcg tgacgcgacc
     1141 agaactgcgt cagtgccgcg atcaggccag ctggattgtc ctcctgcaca ttgtggccgg
     1201 catccggcac gacgacccac tctccggtgg cgaagtgagc ggcgaagcga gcggccgcct
     1261 cgtcggagaa aatttggctg cggccgccac ggaccaccag acagggtgcg gccagtcgct
     1321 cggcggcggc ggccatgtct tctaccttgg cgaggagcgt cggatagtcg gtcgggcgac
     1381 gattgtcgaa ggcccaggcc caatcgccgg actcggtgag gcgcagtatg gccgccatgc
     1441 gataggcgac acgttcgcgg tcgctcaggg agctgatctg catggcggcg tcgacgaccg
     1501 tctcagggcc atcgctggct tggatttcct ggaagaaccc gcgcatgccc gcggtcgctt
     1561 cgaagacgac gccgggcccc acatcgaccg tcaccaaact ggcgactcgg tgtgggttag
     1621 cggcagcgaa gtgggcggca gtaaatccgc ccagcgacat cccgaccagg tgagccgtcg
     1681 accagcccaa ctcatcgagg acagcgccga cgtcggccac gcgggcgtcg agcgtgtagt
     1741 cgtcggccca atcgctatcg ccatgtccgc gcatgtcgag ggccacggcg cgaatctggc
     1801 cgcgcatgcc gaggcacacg taatcccagg tgcgcgccgt gagcctgccg ccatgcagga
     1861 agagcgccgg cggtccatcg ccgccccagt cgagcccatg caaccgtatt ccccccgcgc
     1921 cgatcaaggt cagatgccga ggcggcctcg gatcttcgaa cgtgacgccg agccggcgcg
     1981 cgagctgcgg cagggcggcg aaatcagccg cttgtgcgct cgcacggctt gctcctaggt
     2041 tgccgtttcg accggtcaca ctgggcaccc cgcatggcca caaaggcgac aaagcgcatc
     2101 cggcgcagcc cggaagcctc caagctcgcc attctcgaag cggcggagcg gcgactgatc
     2161 aaggacggac ccgacggcgt gcgcgtgcag cgcatcgccg ccgatctcgg catgaccgac
     2221 gctgcgttgc actatcactt cggcaaccgc gaggcactgg tgaaggcgct gatgcgcttt
     2281 tccgccaagc gtctggtgga cgatatcggg agcgccctcg aagcctggga cgtcgatcgg
     2341 ctcgatctgc atcagctcgg cgcgctgttt cgcaagagct atgccgagcg cggcgtcgcc
     2401 cgactcgtgc tctctgtgct cgccggccgc aggccacggg gggcgggcat gctgcggcgg
     2461 ctg
//
LOCUS       DASWGA010000919         2799 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_228867, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000919 DASWGA010000000
VERSION     DASWGA010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2799
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228867"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VF991_21205"
     CDS             <1..351
                     /locus_tag="VF991_21205"
                     /inference="COORDINATES: protein motif:HMM:NF013247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HEX9559025.1"
                     /translation="QNGIVLDALGNVAETCSSNIFLAKNGIVSTPIPNGTFLAGITRN
                     RTVKLLRNAGVPVEERTVTLADLDDADELFTTGNAGKVQPVSRYESRDLQPGPIARQA
                     HDLYMAYSRTQRVI"
     gene            complement(363..2147)
                     /locus_tag="VF991_21210"
     CDS             complement(363..2147)
                     /locus_tag="VF991_21210"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018460153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9559026.1"
                     /translation="MASKRLDRRLSAILAADVAGYSQLVGADEEGTIGQLKAHRALLF
                     DPKLAEHDGRLVKTTGDGLLAEFASVVDAVRCAVDVQRGMVSRNADVPEAKRIEFRIG
                     VHVGDIIVEDDDIFGDGVNVAARLEGLAEPGGICVSARVQEDVEGRLDVGFMDEGEQQ
                     LKNIARPIRVYRVALDGAEARIEAKARVASPGTGAVPDMPSIAVLPFQNMSADPDQEF
                     FADGMVEDIITDLSRYRNIFVIARNSTFTYKGRAVDVKQVGRELGVRYVLEGSVRRAG
                     SRIRITGQLIDAATAVHIWADRFEGGLEDIFDLQDRVAASVVGAIVPQLRQAEVERAK
                     RKPTENLDAHLCLMRGLASFQRWGRESIDEALRLALRAIELDPNYSTPYGLAVTCYVV
                     RKTNGWMVDPALEIAETARLAARAAQVGSDDAFTLSSTGFAIANILGDLDNGAALIDR
                     ALALIPNSALALVQSGYVRVWLGEPDRAIEQVQQAMRLSPVDALMFMMQGAMAFAHFT
                     AGRYDEAFAWAEKALQRNPFVSPATRIATASAAFLGRPLEARKYLALLRQLDPGLVVS
                     NLHERVNLRRPDDLARLAEGLRKAGLPE"
     gene            complement(2221..>2799)
                     /locus_tag="VF991_21215"
     CDS             complement(2221..>2799)
                     /locus_tag="VF991_21215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559027.1"
                     /translation="ELERRVDGRILMAGGFALFAVGLGWSAFQTWETDFDEMLVPQIL
                     RGSAIMFCLLPPTRLALGRFPPDRVADASGLFNLMRNLGGAIGLALIDTVLFGRAPIL
                     AEQIGQRLKQGDVSVAPLTGIPAETVASAATRVIDATVIETVRPLVERAGLVSAINEA
                     WAMLAAITALALLVLPFIVTAPGRRWWQAPQP"
BASE COUNT          483 a          966 c          914 g          436 t
ORIGIN      
        1 cagaacggca tcgtgctcga tgcgctgggc aacgtggcgg agacctgcag ctccaatatc
       61 ttcctcgcca agaacggcat cgtcagcacg ccgataccca acggcacgtt cctggccggc
      121 atcacgcgca accgcaccgt caagttgctg cgcaatgccg gcgtgccggt cgaggagcgc
      181 acggtgacgc tggctgatct cgacgacgcc gacgagctct tcaccaccgg caatgccggc
      241 aaggtccagc cggtcagccg ttacgaaagc cgcgacctgc agcccggccc gatcgcccgc
      301 caggcgcacg atctctacat ggcgtattcg aggacgcagc gggtcattta ggccgtcatc
      361 ggttattccg gcagcccggc cttgcgcagg ccctcggcca gccgggcgag gtcgtcgggc
      421 cggcgcaggt tgactcgctc gtggaggttc gaaaccacca gtccgggatc gagctggcgc
      481 agaagggcga gatatttcct ggcctccaac ggccgcccga gaaaggcggc actggcggtc
      541 gcgattcggg tcgccggcga aacgaagggg ttgcgctgaa gtgccttctc ggcccaggca
      601 aaggcctcgt cgtatcggcc ggcggtgaaa tgagcgaacg ccatcgcgcc ttgcatcatg
      661 aacatcagcg cgtcgaccgg gctcagccgc atggcctgct gaacctgttc gatcgcccgg
      721 tcgggctcgc cgagccagac cctcacatag ccgctttgca ccaaggcgag cgccgagttc
      781 ggtatcagcg ccagcgcccg atcgatcagg gcggcgccgt tatcgaggtc gccgagaatg
      841 ttggcgatcg cgaagccggt cgaagagagc gtgaaggcat cgtccgaacc gacctgagcc
      901 gcccgcgccg ccagtcgcgc cgtttcggcg atttccagcg cgggatcgac catccagcca
      961 ttcgtcttgc gcacgacgta gcaggtcacg gccaggccat atggcgtgct gtagttcgga
     1021 tcgagctcga tggcgcgaag agccaggcgc agggcttcat cgatgctctc cctgccccag
     1081 cgctggaagc tggccagccc gcgcatcaag cacaggtggg cgtcgagatt ctcggtcggc
     1141 ttgcgcttgg cccgctcgac ctcggcctgc ctgagctgcg gcacgatcgc gccgacgacg
     1201 ctcgccgcca cgcgatcctg cagatcgaat atgtcctcga gcccgccctc gaagcgatcg
     1261 gcccagatat gcaccgccgt cgcagcatcg atgagctgcc cagtgatgcg gatgcgcgat
     1321 cccgcccggc gcacactgcc ttcgagcacg tagcgcacgc cgagctcgcg gccgacctgc
     1381 ttcacgtcga cagcgcggcc cttgtaggtg aaggttgagt tgcgcgcgat gacgaatatg
     1441 ttccggtagc gggacagatc cgtgatgatg tcctcgacca tcccgtcggc aaagaattcc
     1501 tgatcgggat ccgcgctcat gttctggaac ggcaggaccg caatcgacgg catgtcggga
     1561 acggcgccgg ttccgggtga ggccacccgg gccttcgcct cgattcgcgc ctccgcgccg
     1621 tcgagcgcaa cgcggtagac gcggatcggc cgggcgatat tcttgagctg ctgctcgccc
     1681 tcgtccatga agccgacatc cagccggcct tcgacgtctt cctggacacg cgccgacacg
     1741 cagataccgc ccggctcggc cagtccctcg aggcgggcag ccacgttcac gccgtcgccg
     1801 aaaatatcgt catcctcgac gatgatgtcg ccgacatgca cgccgatgcg gaactcgatg
     1861 cgcttggcct cgggcacgtc ggcattgcgg gagaccatcc cacgttgcac gtcgacggcg
     1921 cagcggacgg cgtcgacgac gctggcgaac tcggccagca gcccgtcgcc cgtcgtcttc
     1981 accagccgtc cgtcgtgctc ggcgagcttg ggatcgaaca agagggcgcg atgggccttc
     2041 aactgtccga tcgtgccttc ctcgtcggca cccaccagct ggctgtagcc ggcaacatcg
     2101 gccgccagaa tggccgagag ccgcctgtcc aaacgcttgc ttgccaagga taactccgag
     2161 gggtagcggg ctgacggtcc tacacttagc ccagaaatgt tccgcgcgtc gcctgtggaa
     2221 ctagggctgc ggggcttgcc accagcgccg gcccggcgca gtcacgatga agggcaacac
     2281 caagagcgcc agcgcagtaa tcgccgccag catcgcccag gcctcgttga tggcgctcac
     2341 caggccggcc cgttcgacca gcgggcgcac cgtctcgatg acggtggcgt caatcacgcg
     2401 cgtggcggcg ctcgccaccg tctcagccgg gatgccggtc agcggcgcca ccgagacgtc
     2461 gccctgcttc aaccgttggc cgatctgctc ggccaggatc ggcgcgcggc cgaacaggac
     2521 ggtgtcgatc agcgccagcc cgatggcgcc gcccaggttg cgcatcaggt tgaacaggcc
     2581 gctggcgtcg gcgacgcggt cgggcggaaa gcggccgagc gccagccggg tcggcggcag
     2641 caggcagaac atgatggccg agccgcgcag gatctgcggt accagcatct cgtcgaaatc
     2701 ggtctcccag gtctggaagg cgctccagcc cagccccacg gcgaacaggg cgaagccgcc
     2761 ggccatcagg atgcgcccgt cgacccggcg ctcgagttc
//
LOCUS       DASWGA010000920         2036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_744426, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000920 DASWGA010000000
VERSION     DASWGA010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744426"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..583)
                     /locus_tag="VF991_21220"
     CDS             complement(<1..583)
                     /locus_tag="VF991_21220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559028.1"
                     /translation="MNRNIRLGAALLALVLAAPAEAANKKPSSGATLKFDDAQEYAAC
                     MTLARRKPDEGLESALTWQSRGGAEAAEHCAAVALIGLGETSEAATRLEKLGTRLAAG
                     RPGLAAEVLAQSGQAWLMAGKADRAYAVQTTALKLAPRDVDLLVDRAVTLGQAKNYWE
                     AIDDLNRAHELAPKRSDVLVYRASAYRFVDSPDL"
     gene            722..1891
                     /locus_tag="VF991_21225"
     CDS             722..1891
                     /locus_tag="VF991_21225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HEX9559029.1"
                     /translation="MSVASAEFGQKSRLRALLDHFSRIDDPREAWRVAHPLPEILLLV
                     VCGTIADCDDYDTIAAWGEQRLGFLRRFLPYHHGVPGARWLTLLMNRIDPALFSACFT
                     AWVREVWPDRPELIAIDGKTSRRSHNRPAGKAPLHLVSAFATTGRLVLGQEAVDEKSN
                     ETTAIPVLLERLAEGGALKGAIVTIDAIACNSTIATAITDAGAHYLLAVKENQPTLRA
                     EIETFFADAPPTSLDSFTDLDKGHGRIEQRTVTLAREVDWLTGDRRFPGELRLPGVAA
                     VIKVAARTELKDRGRFDTRYYVSSASLTAHAAAQAVRGHWGIENRLHWVLDVVFKEDQ
                     SRLRTGHGARNMAVVRHFAINLVRAATDKKSIKLRRKIAGWADDYLASILNAKTR"
BASE COUNT          322 a          732 c          650 g          332 t
ORIGIN      
        1 ccaggtcggg gctgtcgacg aaccggtagg cgctggcccg gtagaccagg acgtcggatc
       61 gcttgggggc cagctcgtgg gcgcggttga gatcgtcgat cgcctcccaa tagttcttgg
      121 cctggcccag cgtgaccgca cggtcgacca gcaggtcgac gtcccggggc gccagcttga
      181 gcgcggtggt ctgcacggca taggcccgat cggccttgcc ggccatcagc caggcctgcc
      241 cggactgggc gaggacctcg gcggccagcc ccggccggcc cgccgccagc cgcgtgccga
      301 gcttctccag ccgggtcgcc gcctcgctgg tttcgccgag cccgatcagc gccacggccg
      361 cgcagtgctc ggccgcctcg gcgccgccgc gcgactgcca ggtgagcgcg ctctcgagtc
      421 cctcgtccgg cttgcggcgg gccagcgtca tgcaggcggc atattcctgc gcatcgtcga
      481 acttcagcgt agcgccgctg ctcggcttct tgttcgcggc ctccgccggg gccgccagga
      541 ccagcgccag cagcgccgcc ccgagccgga tgttgcgatt catggcccag gtctagcagt
      601 cggccgcagg gcaatcaatt gggcgcgccg gcgccgcagg gccctgaact cgggttaatg
      661 gcgatttacg gattgccttg gatctgattc ggtggggcag attgattcgg gagcccccat
      721 catgagcgtt gccagtgccg agtttggtca gaagtcccgt cttcgcgctc ttctggatca
      781 cttttcgagg atcgacgatc cgcgcgaggc gtggcgggtc gcccatccgc ttccggagat
      841 cctgctgctg gtcgtttgcg gcacgattgc cgactgcgac gactacgaca cgatcgccgc
      901 gtggggcgag cagcgtctgg ggtttctccg ccgcttcctg ccgtaccatc acggcgtgcc
      961 tggggcgcgc tggctgacgc tgctgatgaa ccggatcgac ccggcgctgt tctcggcctg
     1021 cttcaccgcc tgggttcgcg aggtctggcc cgaccggccc gagttgatcg ccatcgacgg
     1081 caaaacctcg cggcgcagcc acaatcgccc ggccggaaag gctccgctcc atctcgtctc
     1141 ggccttcgcc accaccggcc ggctggtcct cggccaggaa gcggtcgacg agaagtcgaa
     1201 cgagacgacg gccattccgg tcctcctcga gcgtctcgcc gagggcggtg cgctgaaggg
     1261 cgccatcgtc accatcgacg ccatcgcctg caattcgacc atcgccacgg cgatcaccga
     1321 tgccggcgcc cactacctgc tcgccgtcaa ggaaaaccag ccgacgcttc gcgccgagat
     1381 cgaaaccttc ttcgccgacg ccccgcccac cagcctcgac agcttcaccg atctcgacaa
     1441 aggccacggc cgcatcgagc agcgaaccgt caccctcgcc cgcgaggtcg attggctcac
     1501 cggcgacagg cgcttccccg gcgaactccg cctgccaggc gtcgccgccg tcatcaaggt
     1561 cgccgcgcgc accgagctca aggatcgcgg acgcttcgac acccgatact acgtctcctc
     1621 cgcaagcctc acagcccacg ccgccgccca ggccgtgcgc ggccactggg gcatcgaaaa
     1681 ccgcctccac tgggtgctcg acgtcgtctt caaggaagac cagtcacgtc tcaggaccgg
     1741 gcatggcgca cgaaacatgg ccgtcgtcag gcacttcgcc atcaacctcg tgcgcgccgc
     1801 aaccgataag aaaagcatca agctgcgccg aaaaatcgcc ggctgggccg acgactacct
     1861 cgcctcaatc ctcaacgcca aaacgcgtta acccggattc ggagccctgg ttcttggggc
     1921 gggagcggcc gccgattgat gggcacgact cggcgccacg gggcggtgcg tcctctacct
     1981 catgcttcga caagactcgg catgtggtag aggaaaggcc gtaggggatt ggagat
//
LOCUS       DASWGA010000921         8041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_348757, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000921 DASWGA010000000
VERSION     DASWGA010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8041
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348757"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..890)
                     /locus_tag="VF991_21230"
     CDS             complement(<1..890)
                     /locus_tag="VF991_21230"
                     /inference="COORDINATES: protein motif:HMM:NF022447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2817 domain-containing protein"
                     /protein_id="HEX9559030.1"
                     /translation="MPNIQSFAADYGEARDKFLSAARLAGAITHRYDNPTKGPKGEAL
                     STDVAWLGQHDAAKLVVTISSTHGVEGYCGSGFQVDWLASVGAYGLPPDTAALFVHAI
                     NPYGFAWTRRVTEEGNDLNRNYVEHGKPYPVNEGYLEIADLLVPADFSKPGIEAADAK
                     LAAYRKKVGDVAYFRAVSGGQYSHPDGMFFGGGGPCWSNRTLHAITDKFLKGRADVAV
                     IDFHTGLGPYGYGEPITHYDIDTPASRRVRAFWGESVTESKRGQTASQARDGLGHYGL
                     NRVLLEPETRLTMCTLEFGT"
     gene            complement(902..1657)
                     /locus_tag="VF991_21235"
     CDS             complement(902..1657)
                     /locus_tag="VF991_21235"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9559031.1"
                     /translation="MARLAGKIAIVTGAASGIGAASAKLFADEGAQVLAVDRPESAIE
                     QTHAGNNAVVALACDITGDDAPKRIVAAALSKFGALDILFNNAGVSGRALVEEMTDEH
                     WDRVNGVNVRAMFRLCREAIPALKARAKEKGRARIVNTASVMAFDTDYGLAAYCASKA
                     GVGGLTRTLALELGKFNITANYVCPGAIYTGMTRTNFDNPEIRAVWEKKAALRRLGQP
                     IDIARGALLLASDDADFITGHELVVDGGLTLRT"
     gene            complement(2039..3004)
                     /locus_tag="VF991_21240"
     CDS             complement(2039..3004)
                     /locus_tag="VF991_21240"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9559032.1"
                     /translation="MIGRRRLAVLGASLLSLPARADDFPARPITLVVPFAAGGSIDVL
                     ARLAAQQAGTTLGQPVVVDNRGGAAGLIGAASVARAEPDGYTLLMASAAQVTIPPWIN
                     RSLTFDPPKDLAPVAHLVDTPMVLIVSANSKMQSIDDFIAEARAHRGGLNYASTGVGT
                     ISHLVMESLKLAADIDVVHVPYRGAAPALNDLYAGQVQGMFTSTASAAPMVAAGKLRP
                     LAVTTASRSPLLPEVPTMAEAGWPAAEVVVWAGVMAPSGVPRTIMRQLERAFVDAALA
                     PEVRERLVGLGADPVGHGAKAFAEVLQRDLALWQRVALASGVKVE"
     gene            complement(3012..3989)
                     /locus_tag="VF991_21245"
     CDS             complement(3012..3989)
                     /locus_tag="VF991_21245"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009464359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003960 - NADPH:quinone reductase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase family protein"
                     /protein_id="HEX9559033.1"
                     /translation="MRAMLSETPGGPESLKLMELPSKPPGKGQVRVAIRAAGVNFPDT
                     LIIADKYQFKPPRPFAPGHEIGGDVVEVGEGVSGYKVGDRVIGMIGHGGYASEAVVDQ
                     ANLLPMPQNMSYEDGAAFTMTYGTSYYALKQRSSYKPGETLLVTGASGGVGLTAVELG
                     ARMGLKVIAAVGSDEKMEICKKYGATMFVNYAKEKMRDKVKELTGGNGADIIYDAVGG
                     DAFDEAIRCIAWYGRLLVVGFAAGRIPSLPANLALLKSCDVRGVFYGAWRGREPAEAR
                     KNFDELLKWYGEGKLKPHISMRFPLEKGADAMNALLSRKATGKVVLTVA"
     gene            4107..4562
                     /locus_tag="VF991_21250"
     CDS             4107..4562
                     /locus_tag="VF991_21250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX9559034.1"
                     /translation="MAGLYFEEFVVDRVFDHAWTRTVTEMDNVLFSSLTMNVQPLHLD
                     EEFAAKTEFGQRIVNSLFTLGLMIGITVNDTTLGTTVANLGMTDVRFPKPVFHGDTLR
                     VQTKVLSVRESKSRPDAGIVEFAHTAVNQRGETVAQCTRQALMRKKPKD"
     gene            4567..5430
                     /locus_tag="VF991_21255"
     CDS             4567..5430
                     /locus_tag="VF991_21255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX9559035.1"
                     /translation="MRSFLFVPADSERKLARGPSFGADGLILDLEDSVAADRKKIARD
                     MALAYLRAVDRTGPKLYVRVNALDTGLTLGDLAVVMQGRPDGIVFPKCVGQANLDLLG
                     NYLDAFEARESIDAGATKILTIATESAAAVLALTAAPAKHARLMGHSWGGEDLMADLG
                     ALAKGPAPGTYDDTFRLARTVNLMAAVAAGVTAYDTVYPDIKNVEGLRAEATEARRMG
                     YGGKIAIHPDQVAIIHEVFTPSAQEIDWAKRVVATFENSPSAGVLTLDGKMLDRPHFV
                     LARRLLARAGG"
     gene            5427..6050
                     /locus_tag="VF991_21260"
     CDS             5427..6050
                     /locus_tag="VF991_21260"
                     /inference="COORDINATES: protein motif:HMM:NF017833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis protein"
                     /protein_id="HEX9559036.1"
                     /translation="MKDNFALLETLDRLFEGSRESVLTLDDFLGGLQGRSYAFAILLL
                     DLPNCLPTGIPWLSTVTGLPMLLLLFQFFSGRPAPSLPKMIGRRGLRRGKLQDFLGRG
                     RRHIARLENAVHARHEWLVTGMPRRLLQIAWALNVLVLALPIPFDNLLPAFAILFFCL
                     ALIEDDGVMALLGWLFSLITVVWTIFLLIIGRTAIVAAMETVHQFLF"
     gene            complement(6167..7597)
                     /locus_tag="VF991_21265"
     CDS             complement(6167..7597)
                     /locus_tag="VF991_21265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEX9559037.1"
                     /translation="MASARTVVAFRPKPGSRAKDELAFLPAALEVVETPPSPVGRAVA
                     AAIIAFFCLALAWACWGEVDIIASASGKIIPSGKIKTIQPFETGVIRAIHVQDGQRVK
                     AGDSLIELDPTMNAAELGHLQSDLVATQLELARLRAVLVENGDPLAEFHPPAGASPAQ
                     VETQRRFLVSQDGEFRAKLAVLDRQQEQKEAERATIGAAIAKLEATLPVVEQRFEVRK
                     TLFGKELGAKLQYLEALQQLVEQQQDLLLQKSRYREATAALAANTETRAQTLAEYRRT
                     RFGEFAEAERKMAGLQQDLIKAEQRTKLQLLTAPVDGIVQQLAVHTVGGVVTPAQALL
                     VLVPVDGRLEIEATVPNRDIGFVAAGQDAEIKVDTFNFTRYGILHGKVLSVSQDAIAR
                     DKPPDRPNDKSKGTESGNSEPQGQELGYAARVSLDRTRMQVGDNLVNLSPGMAVTVEI
                     KTGSRTVMSYLLSPLLRYKQDSLRER"
     gene            complement(7584..>8041)
                     /locus_tag="VF991_21270"
     CDS             complement(7584..>8041)
                     /locus_tag="VF991_21270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9559038.1"
                     /translation="ENIALATPGLPRAQVIAVARLAGADEFISKLPLGYDTQIQERGA
                     NLSGGQRQRVAIARALVTQPRILIFDEATSALDYESERAIQQNMQQIAQGRTVFIIAH
                     RLSTVRRTDRIITIDRGRLVEDGTHEDLVRTGGRYATLFRLQGGLHGVR"
BASE COUNT         1262 a         2691 c         2681 g         1407 t
ORIGIN      
        1 aacgtgccga attccagggt gcacatggtg agccgcgtct cgggctccag cagcacacgg
       61 ttgaggccgt agtggccgag cccgtcgcgc gcctgcgagg cggtctggcc gcgtttggac
      121 tcggtcaccg actcgcccca gaaggcgcgc acccgtcgcg aggccggcgt gtcgatgtcg
      181 tagtgggtga tcggctcgcc gtagccgtac ggccccaggc cggtatggaa atcgatgacg
      241 gcgacgtcgg cgcggccttt gaggaatttg tcggtgatgg cgtgcaaggt gcggttcgac
      301 cagcacgggc cgccgccgcc gaagaacatg ccgtcgggat ggctgtactg gccgcccgag
      361 acggcgcgga aataggcgac gtcgcccacc ttcttgcgat aggcggcgag cttggcgtcg
      421 gccgcctcga tgccgggctt gctgaagtcg gccggcacca ggagatcggc gatctcgaga
      481 tagccctcgt tcaccggata gggcttgccg tgttcgacgt agttgcggtt gaggtcgttg
      541 ccctcctccg tcacccgccg cgtccaggca aagccgtagg gattgatggc gtggacgaac
      601 agcgcggcgg tatccggtgg caggccatag gccccgacgc tcgccagcca gtcgacctga
      661 aagcccgaac cgcagtaccc ctcgacgccg tgcgtgctgg aaatcgtgac caccagcttg
      721 gcggcgtcgt gctgacccag ccaggcgaca tcggtcgaga gcgcttcacc tttggggccc
      781 ttggtcggat tgtcgtagcg atgggtaatg gcaccggcca aacgcgcggc ggacaggaac
      841 ttgtcgcgcg cttcgccgta gtcggcggca aatgactgga tattgggcat gaaacaacaa
      901 cctaggttct gagcgtcagc ccgccgtcga ccaccagctc gtggccggtg atgaagtcgg
      961 cgtcgtccga cgccagcagg agcgcgccgc gggcaatatc gatcggttgg ccgagccggc
     1021 gcaaggccgc cttcttctcc cacaccgccc ggatttcggg attgtcgaag ttggtgcggg
     1081 tcatgccggt atagatcgca ccggggcaga catagttggc cgtgatgttg aatttgccga
     1141 gctcgagcgc cagcgtgcgc gtcaacccgc cgacgcccgc cttggaggcg cagtaggcgg
     1201 caagcccgta gtcggtgtcg aaggccatca ccgaggcggt gttgacgatg cgcgcccggc
     1261 ccttctcctt ggcccgtgcc ttgagcgccg gaatggcctc gcggcagagc cggaacatcg
     1321 cccgcacgtt gacgccgttg acgcgatccc aatgctcgtc ggtcatctcc tcgaccaagg
     1381 cgcggccgct caccccggca ttgttgaaca ggatgtcgag ggcgccgaac ttcgagaggg
     1441 cggcggccac gatcctcttg ggagcatcat cgccggtgat gtcgcaggcg agggcaacca
     1501 cggcattgtt gcccgcgtgg gtctgctcga tcgccgattc gggccgatcc acggccagca
     1561 cctgcgcgcc ctcgtcggcg aagagcttgg cggaggccgc gccgatgccc gacgcggcgc
     1621 cggtaacgat cgcgatcttg cccgccaatc tagccacagc agcctcccgt gtgcgaattg
     1681 cgcgacactc tgttgcgaca gggcattgcg cgacgccacc cccgtcttgc cttcggctcg
     1741 tccactgtct cacccatggg atgcaccgcg gcgggcgttt tcgcaatttc cgcaatttcc
     1801 gcaagcgcta cgccaatcag cgtctgggat gcactccctg aggtgagaca gcaaactgcg
     1861 gtgcggcgac gacgagcgaa ttcacggaga cggccgttgg catgacgatg ctcctgcatc
     1921 tgatgatcgg agtataaagt ttcactcctt aagtgtcaag tactatttca gagcgacttg
     1981 aacgaatttc tgcgcaccat actgcgcaga aattcgactc gcctacccgg tgggagggtc
     2041 attcgacctt gacgcccgag gcgagcgcca cgcgctgcca cagcgccagg tctctttgca
     2101 gcacctcggc aaaagccttg gccccatgcc cgaccgggtc ggcgccgagg ccgaccagcc
     2161 gctcgcgcac ctcgggcgcg agcgcggcat cgacgaaggc gcgctcgagc tggcgcatga
     2221 tcgtgcgcgg cacgccgctc ggcgccatca cgccggccca caccacgacc tcggccgccg
     2281 gccagccggc ttcggccatg gtcggcacct cgggcagcag cggcgagcgg ctggccgtgg
     2341 tcacggcgag cggccgaagc ttgccggcag ccaccatcgg cgcggccgac gcggtgctgg
     2401 tgaacatgcc ctggacctgt cccgcataca ggtcgttcag cgccggcgcg gcgccgcgat
     2461 agggcacgtg gaccacgtcg atgtcggcgg caagcttcag gctctccatg acgaggtgcg
     2521 agatcgtgcc gacgccggtc gaggcgtagt tgaggccacc gcggtgtgcc cgggcctcgg
     2581 cgatgaagtc gtcgatgctc tgcatcttcg aattggccga cacgatcagg accatcggcg
     2641 tgtcgacaag gtgtgccacc ggcgccaggt ccttgggcgg atcgaaggtg agcgagcggt
     2701 tgatccaggg cgggatcgtc acctgcgccg ccgaggccat cagcagcgtg tagccgtcgg
     2761 gctcggcccg cgcgaccgac gccgcgccga tcagaccagc ggcgccgccg cgattgtcga
     2821 ccacgaccgg ctgaccgagg gtggtgcctg cctgctgggc ggcgagccgg gccagtacgt
     2881 cgatcgagcc gccggccgcg aacggcacga cgagcgtgat cggccgggct gggaaatcat
     2941 cggcgcgcgc cggcagcgac aggagcgacg cgccgaggac ggcgagacgg cgccggccga
     3001 tcatcgccgg ctcatgccac ggtcaggacg accttgcccg tcgccttgcg cgacagcagc
     3061 gcattcatgg cgtcggcccc cttctcgagc ggaaagcgca tggagatgtg cggcttgagc
     3121 ttgccctcgc cgtaccattt caagagctcg tcgaagttct tgcgcgcctc agccggctca
     3181 cggccgcgcc aggcgccgta gaacacaccg cgcacgtcgc agctcttgag cagcgccagg
     3241 ttggccggca gcgaggggat gcggccggcg gcgaagccca ccaccagcag gcggccgtac
     3301 caggcgatgc agcggatcgc ctcgtcgaag gcatcgccgc cgacggcgtc gtagatgatg
     3361 tccgcgccgt tgccgccggt cagctccttc accttgtcgc gcatcttctc cttggcgtag
     3421 ttcacgaaca tcgtggcgcc gtactttttg cagatctcca tcttctcgtc ggagccgacg
     3481 gcggcgatca cttttagccc catccgcgcg cccagctcga ccgcggtcag gccaacgccg
     3541 cccgaggcgc cggtcaccag cagcgtctcg ccgggcttgt agctgctgcg ttgcttcagg
     3601 gcgtagtagg acgtgccgta ggtcatggtg aaggcggcac cgtcctcgta gctcatgttc
     3661 tggggcatcg gcagcaggtt ggcctggtcg accacggcct cgctggcgta gccgccatgg
     3721 ccgatcatgc cgatcacgcg gtcgcccacc ttgtacccgc tcacgccttc acccacttcg
     3781 acgacgtcgc cgccgatctc gtgaccgggg gcgaaggggc gcggcggctt gaactgatac
     3841 ttgtcggcga tgatcagcgt gtcgggaaaa ttgacgccgg ccgcgcggat cgcgacgcgc
     3901 acctggccct tgcccggcgg cttggagggc agctccatca gcttcagact ctcgggcccg
     3961 cctggtgttt cgctcagcat cgcgcgcatg tgcttaagct ccgtctcgct gtttcgtcct
     4021 gtggcggcat tgatacgatg gcggcccctc accgtccatg gcagcgtcca ttcgtgctag
     4081 aagagctgac tttcgcgagg aggaagatgg cggggctgta tttcgaggag tttgtggtcg
     4141 accgggtgtt cgaccacgcc tggacgcgca cggtcacgga gatggacaac gtgctgttca
     4201 gctcgctcac catgaacgtg cagccgcttc atctcgacga ggagttcgcc gccaagaccg
     4261 agttcggcca gcgcatcgtc aacagcctgt tcacgctcgg tctgatgatc ggcatcaccg
     4321 tgaacgacac cacgctcggc acgacggtgg ccaatctcgg catgaccgac gtgcgcttcc
     4381 ccaagccggt cttccacggc gacacgctgc gcgtgcagac caaggtcttg agcgtgcgcg
     4441 agagcaagtc gcggcccgac gccggcatcg tcgaattcgc ccacaccgcc gtcaaccagc
     4501 gcggcgagac cgtcgcccag tgcacgcgcc aggcgctgat gcgcaagaaa cccaaggact
     4561 gagccgatgc gttccttcct gttcgtgccc gccgactcgg aacgcaagct cgccagggga
     4621 ccctcgttcg gtgcggacgg gctgatcctc gacctcgagg actccgtcgc cgccgatcgc
     4681 aagaagatcg cccgcgacat ggcgctggcc tacctcaggg ccgtcgatcg caccggcccc
     4741 aagctctatg tgcgggtgaa cgcgctcgat accggcctta ccctgggcga tctcgcggtc
     4801 gtcatgcagg gccgacccga cggcatcgtg ttccccaaat gcgtgggcca ggccaatctc
     4861 gacctgctgg ggaactatct cgacgcattc gaagcgcgcg aaagcatcga cgccggcgcg
     4921 acgaagatcc tgaccatcgc caccgaaagc gccgccgccg tgctggcgct gaccgccgcg
     4981 ccggccaagc atgcgcgcct gatgggccat tcctggggcg gcgaggatct gatggccgat
     5041 ctcggcgcgc tggccaaggg cccggcgccg ggcacctacg acgatacttt caggctggcg
     5101 cgcactgtca acctgatggc cgcggtcgcg gcgggtgtca ccgcctacga tacggtctat
     5161 cccgacatca agaacgtcga gggcctgcgc gccgaggcga ccgaggccag gcgcatgggc
     5221 tatggcggca agatcgccat ccatcccgac caggtcgcga tcatccacga ggtgttcacg
     5281 ccgtcggcgc aggagatcga ctgggccaag cgggtggtcg ccaccttcga gaacagtcca
     5341 agtgccggcg tgctcacgct cgacggcaag atgctcgacc gaccgcattt cgtgctggcg
     5401 cgccgcctgc tggcgcgggc cggaggatga aagacaattt tgccctcctc gagacgctcg
     5461 acaggctgtt cgagggttcc cgcgagtccg tcctgacgct cgacgatttc ctcggcggcc
     5521 tgcagggccg ttcctacgcc ttcgccatcc tgctgctcga cctgcccaat tgcctgccga
     5581 caggcatccc gtggctgtcg accgtaacag gcctgccgat gctgctgctg ctgtttcaat
     5641 tcttctccgg ccggcccgcg ccatcgctgc cgaaaatgat cggccggcgc ggcctgcggc
     5701 gcggcaagct gcaggatttc ctgggccgcg ggcgccgcca tatcgcgcgg ctcgaaaacg
     5761 ccgtccacgc gcgccacgaa tggttggtga ccggcatgcc gcggcggctg ctgcaaatcg
     5821 cctgggcgct caacgtgctg gtgctggccc tgcccatccc tttcgacaat ctgcttccgg
     5881 ccttcgctat cctgttcttc tgcctcgccc tgatcgaaga tgacggcgtg atggcgctgc
     5941 tgggctggct gttcagcctg atcaccgtcg tctggacgat attcctgctg atcatcggac
     6001 gcacggcgat cgtggcggcg atggagactg ttcaccagtt ccttttttga ttaggccggc
     6061 gaacccgccc gcgtggtgct gtcgtcctga gcgcagcgaa ggacctcatc gccgcttgcc
     6121 acgggcatga gatccttcgc tgcgctcagg atgacagcgg acgtcgctat ctttcgcgca
     6181 ggctgtcctg cttgtacctc agcagcggtg acagcaggta gctcatcacc gtgcgcgatc
     6241 ccgtcttgat ctcgaccgtg acggccatgc cgggcgagag attgaccaga ttgtcgccga
     6301 cctgcatccg ggtgcgatcg agcgatacgc gcgcggcgta gcccagctcc tggccttgcg
     6361 gctcgctgtt gccgctctcc gtccccttcg acttgtcgtt cggcctgtcc ggcggcttgt
     6421 cgcgggcgat ggcgtcctgc gagacgctca gcaccttgcc gtggaggatg ccgtagcggg
     6481 tgaaattgaa ggtgtcgacc ttgatctcgg catcctggcc ggcagcgaca aagccgatgt
     6541 cgcggttggg caccgtcgcc tcgatctcga gccggccgtc gaccggcacc agcaccagca
     6601 atgcctgggc cggcgtcacg acgccgccga ccgtgtggac ggcgagctgc tggacaatgc
     6661 cgtcgaccgg cgccgtcagg agctgcagct tggtccgctg ttcggccttg atcaggtcct
     6721 gctgtaggcc cgccatcttg cgctcggcct cggcgaattc gccgaagcgg gtgcgccggt
     6781 attcggcaag cgtctgtgcg cgggtctcgg tgttcgccgc cagggcggcc gtcgcctcgc
     6841 ggtagcggct cttctggagg aggaggtcct gctgctgctc gaccagctgc tgcagcgcct
     6901 cgagatattg cagcttggcg ccgagttcct tgccaaacag cgttttacgg acctcgaacc
     6961 gttgctcgac gacgggaagc gtcgcttcca gcttggcgat cgccgcaccg atcgtggcgc
     7021 gctcggcttc cttttgctcc tgctggcggt cgagtaccgc gagcttggcc cggaactcgc
     7081 cgtcctggct gaccaggaac cggcgctgtg tctccacttg ggccgggctg gcgccggccg
     7141 gcggatggaa ctcggccagc ggatcgccat tctcgaccag caccgcccgc aggcgcgcca
     7201 gctcgagctg ggtcgcaacc aggtcgctct gcagatggcc gagctcggcg gcattcatcg
     7261 tcgggtcgag ctcgatcagg ctgtcgcctg ccttgacccg ctggccgtcc tggacatgga
     7321 tcgccctgat cacgccggtc tcgaagggtt ggatggtctt gatcttgcca ctcgggatga
     7381 tcttgcccga cgccgaagcg atgatgtcga cctcgcccca gcacgcccag gccagcgcca
     7441 ggcagaagaa agcgatgatc gcggcggcga cggcgcggcc gacgggcgac ggcggcgtct
     7501 cgacaacctc cagcgccgcc ggcaggaaag cgagctcgtc cttggcgcgg ctgccgggtt
     7561 tcggccggaa ggcgacgacg gtcctagcgg acgccatgga gaccaccctg caggcggaaa
     7621 agcgtggcgt agcggccgcc cgtgcgcacg agatcttcgt gggtcccgtc ctccacgagc
     7681 cggccgcggt cgatggtgat gatgcggtcg gtgcggcgca cggtagagag gcggtgagcg
     7741 atgatgaaca ctgtgcggcc ctgagcgatc tgctgcatgt tctgctggat cgcccgctcg
     7801 ctctcgtagt cgagggcgct ggtcgcctcg tcgaagatca ggatgcgggg ttgtgttacc
     7861 aaagcgcgcg cgatggcgac gcgctggcgt tgaccaccag agagattagc gccgcgttcc
     7921 tgtatctggg tgtcgtaacc aagcggaagc ttggagatga attcgtccgc gcccgccagt
     7981 cgcgccaccg ctatgacctg cgcgcgcggc agccccggcg tcgcgagcgc gatgttttca
     8041 t
//
LOCUS       DASWGA010000922         3951 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1759520, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000922 DASWGA010000000
VERSION     DASWGA010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3951
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1759520"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VF991_21275"
     CDS             complement(<1..234)
                     /locus_tag="VF991_21275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559039.1"
                     /translation="MMVPGFNVRDGGPVQPVNMQQLALAGFRPPPVMSMPGLPQAPQA
                     GPTPGFNVDDAAGLLKAALGAFGKDDPGAAAQAA"
     gene            complement(231..1232)
                     /locus_tag="VF991_21280"
     CDS             complement(231..1232)
                     /locus_tag="VF991_21280"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098024 - virus tail, fiber [Evidence
                     IEA];
                     GO_process: GO:0019062 - virion attachment to host cell
                     [Evidence IEA];
                     GO_process: GO:0046718 - viral entry into host cell
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEX9559040.1"
                     /translation="MKQLVGNVGNLFDKNPSAPAYYPGQTVATPSVATQSYQQTLRDL
                     GTNGLGYGIDAASRQNAADTLAGKYLDPANNPWLQKSLAAGFGTQNEQFNNTVVPSLR
                     SQFAAAGRTGASEDFNTTMRAAKDLGQTQANAAANAELGAYNNERGIQQQVQGMLPSF
                     QGMDLQRAAALGQSGQGIDAYNQALIDDQIKRYTYDKTANLNYWSDIAQRLLGMYPGG
                     TTSGTGTSSGYTQSIQGTNPLATVLNAGMKGASMVLPYLFASDERLKTDIRPVGRLND
                     GQNVYSYRFHGSPRTQIGLLAQEVEKKYPDAVATHPAGYKMVHYGRATAAAAPGGLM"
     gene            complement(1322..1792)
                     /locus_tag="VF991_21285"
     CDS             complement(1322..1792)
                     /locus_tag="VF991_21285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559041.1"
                     /translation="MIAGGIPLRDLHLVWHELWPLLEPAVKRSPNYSAVTRAGADAEW
                     LLARLIARDAQLWAVYEGATPVAAIITTVQVAAHSTSSGQAEKRCLIWLVGGSRLGEW
                     AADFLAKVEAWARSLGCVALWGAGRKGWTRMAEKFGGRSIGIIDGQLAWERRFA"
     gene            complement(1789..2367)
                     /locus_tag="VF991_21290"
     CDS             complement(1789..2367)
                     /locus_tag="VF991_21290"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEX9559042.1"
                     /translation="MSLPALPPEADTRSITERLNVLIRDYNQALRTPPGVILPFAGGA
                     APDGFLLCFGQAVSRDTYSDLFAAIGTTYGAGDGSTTFNLPDLRGRVIAGKDDMGGTA
                     ANRITNGGSGIVGTTLGANGGAETHTLTTAQIPAHSHTILGGDTTPASFTNRAGQGDG
                     NNNHNWNSGSAGGGGAHNNTQPTLILNHIIST"
     gene            complement(2364..3860)
                     /locus_tag="VF991_21295"
     CDS             complement(2364..3860)
                     /locus_tag="VF991_21295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559043.1"
                     /translation="MPVIPFAEWRPDMPDLSQWAREALNVIPAEESYRPLNALSSVTN
                     ALTARAQGAAWFRGTAGAVKMFAGDTTKLYLLAGTTWSDVSRTVGGAYAPGADGAWRF
                     TQFGTLAIAVNGVDAPQKFDLAAGTNWTALGGSPPIGTYICTVKNFVLMGKIGSTPQR
                     VQYSGIDNAEIWGAVAANQAGFQAGDVAAVGQVLEAGLVGGELGVIFQEAAVRRMTYE
                     GAPVVFRIDKIANDLGCSVPGSVAGLLDRAFFVHKSGFYMVQGGQAITPIGRGKVDRT
                     FWAEFDETNQFRCSAAIDPVRGLYIFAYPANGNGGVPNRLLIYNWTTERWAHAQVACE
                     LVFGGVSQQGYTVEQLDPFGTVDTLPYSTDSSFWTGTVSLLLFAFDTSHKSGSFSGPT
                     LAATVETGEFNPSAMLGTGPGNGMRSVIRGCRPLIDGGSPQIQLGCRETQQVAANYGP
                     IVGLTPAGLAPVLQSGRYFRARASMPAGATWSNMQGIDDVDARPAGGQ"
BASE COUNT          557 a         1318 c         1415 g          661 t
ORIGIN      
        1 cgccgcctgg gcggcggcac ccggatcgtc cttgccgaac gcgcccagcg ccgccttgag
       61 gagccccgcg gcatcgtcca cgttgaagcc cggcgtcggg ccggcttgcg gggcctgagg
      121 cagcccgggc atgctcatga ccggcggcgg ccgaaagccc gcgagcgcaa gctgctgcat
      181 gttgaccggc tgcacgggcc cgccgtcgcg aacgttgaaa cctggaacca tcacatcagc
      241 cctccgggtg cggccgctgc ggtggcgcgg ccgtagtgga ccatcttgta gccggccgga
      301 tgcgtggcga cggcgtcggg gtatttcttc tcgacctcct gcgccagcag gccgatctgc
      361 gtgcgcgggc tgccgtggaa gcgatagctg tagacgttct ggccgtcgtt cagcctgccg
      421 acgggcctga tgtcggtctt cagccgctcg tccgacgcga aaaggtaggg cagcaccatg
      481 ctcgcgccct tcatccccgc gttgagcacg gttgcgagcg gattggtgcc ctggatggac
      541 tgcgtatagc ccgagctggt gccggtgccg ctggtcgtgc cgccgggata catgccgagc
      601 agccgctggg cgatgtcgct ccagtaattg agattggcgg tcttgtcgta ggtatagcgc
      661 ttgatctggt cgtcgatcag cgcctggttg taggcgtcga tgccctgccc ggactggccg
      721 agcgccgccg cgcgctgcag atccatgccc tggaacgacg gcagcatgcc ctgcacctgc
      781 tgctggatgc cgcgctcgtt gttgtaggcg ccgagctcgg cgttcgccgc ggcattggcc
      841 tgtgtctggc cgaggtcctt ggcggcgcgc atcgtcgtat tgaagtcttc gctcgccccg
      901 gtgcgcccgg ccgccgcgaa ctggctgcgc aggctcggca cgacggtgtt gttgaactgc
      961 tcgttctgcg tcccgaagcc cgcggccagc gacttctgca gccacggatt gttggccgga
     1021 tcgaggtact tgccggcgag cgtgtcggcg gcgttctgcc ggctcgccgc gtcgatgccg
     1081 tagcccaggc cgttggtgcc gagatcgcgc agcgtctgct ggtacgattg cgtcgccacg
     1141 gacggcgtcg ccacggtctg gcccggataa taggccggcg cgctgggatt cttgtcgaag
     1201 agattgccca cgttgccgac cagctgcttc aagtacggct ggaggaacgg cgagggctcg
     1261 ctcgtgctcg tggtctgctg tgtctgatac gagttcgatt gactcggtgt ctggccgccg
     1321 ctcatgcaaa cctccgttcc caagcgagtt gtccgtcgat gatgccgatg ctcctgccgc
     1381 cgaatttctc cgccatccgc gtccagccct tgcggcccgc gccccacagc gcgacgcatc
     1441 cgagcgagcg cgcccacgcc tcgaccttgg cgaggaaatc ggccgcccat tcgccgagcc
     1501 gcgagccgcc gaccagccag atcaggcagc gcttttctgc ctgccctgag cttgtcgaat
     1561 gggctgcgac ctggaccgtg gtgatgatcg cggccaccgg cgtggcgccc tcgtagaccg
     1621 cccagagctg ggcatcgcgc gcgatcaggc gcgccagcaa ccattcggcg tcggccccag
     1681 cgcgggtgac cgcgctgtag ttgggcgagc gcttcaccgc gggctcgagc aacggccaga
     1741 gctcgtgcca gaccaggtgg aggtcgcgca aagggatgcc gccggcaatc atgtgctgat
     1801 gatgtggttg aggatgaggg tgggctgcgt gttgttgtgc gcgcccccgc cgccggccga
     1861 accggaattc cagttgtggt tgttgttgcc gtcgccctgg ccagcgcggt tggtgaacga
     1921 ggcgggcgtc gtgtcgccgc ccaggatggt gtggctgtgg gcagggatct gcgccgtcgt
     1981 gagggtgtgc gtctcggcgc cgccattggc gcccagggtg gtgccgacga tccccgaacc
     2041 gccgttggtg atccggttgg cggccgtgcc gcccatgtcg tccttgccgg cgatgacgcg
     2101 gccgcgaaga tcggggaggt tgaacgtggt cgacccgtcg ccggcgccgt aggtcgtgcc
     2161 gatcgcggcg aacagatcgg aataggtgtc gcgcgacacc gcctggccga agcagagcag
     2221 gaagccgtcg ggcgccgccc caccggcaaa cggcaggatc acgcccggcg gcgtgcgcag
     2281 cgcctggttg tagtcgcgga tcagcacgtt cagccgctcg gtgatcgagc gcgtatcggc
     2341 ctcgggcggc agggcgggca ggctcattgg ccacctgccg gccgggcatc aacgtcgtcg
     2401 atgccctgca tgttcgacca ggtggcgcct gccggcatgc tcgcgcgcgc ccggaaatag
     2461 cggccgctct gcagcaccgg cgccaggccc gcgggcgtga gcccgacgat ggggccgtag
     2521 ttggccgcca cctgctgggt ttcgcgacag ccgagctgga tctgcgggct gccgccgtcg
     2581 atcagcggcc ggcagccgcg gatcaccgac cgcatgccgt tgccgggacc tgtcccgagc
     2641 atcgccgagg gattgaactc gccggtctcc acggtcgccg ccaaggtcgg gccggagaac
     2701 gagccgctct tgtggctggt gtcgaaagcg aacagcagca gcgagaccgt gccggtccag
     2761 aacgaggagt cggtcgagta gggcagcgtg tcgaccgtgc cgaacggatc gagctgctcg
     2821 accgtgtagc cctgctggct gacgccgccg aacaccagct cgcaggcgac ctgggcgtgg
     2881 gcccagcgct cggtggtcca gttgtagatc agcagccgat tgggcacgcc gccgttgccg
     2941 ttcgccggat aggcgaagat gtagagcccg cgcaccggat cgatggccgc gctgcagcgg
     3001 aactggttgg tttcgtcgaa ctcggcccag aaggtgcggt cgaccttgcc gcggccgatc
     3061 ggcgtgatcg cctggccgcc ctgcaccatg tagaagcccg acttgtgcac gaagaacgcc
     3121 cggtcgagca ggccggcgac gctgcccggc acgctgcagc ccagatcgtt ggcgatcttg
     3181 tcgatgcgga agacgaccgg cgcgccctca taggtcatgc gccgcaccgc ggcctcctgg
     3241 aagatcacgc cgagctcgcc gccgaccagg ccggcttcca ggacctgccc gacggcggca
     3301 acgtcaccgg cctggaagcc ggcctggttg gccgccaccg cgccccatat ctcggcattg
     3361 tcgatgccgg aatactgcac gcgctgcggc gtcgagccga tcttgcccat cagcacgaaa
     3421 ttcttgaccg tgcagatgta ggtgccgatc ggcgggctgc cgcccagcgc ggtccagttg
     3481 gtgccggcgg cgaggtcgaa cttctgcggc gcgtcgacgc cgttcaccgc gatcgccagc
     3541 gtgccgaact gggtgaagcg ccaggcgccg tcggctcccg gcgcgtaggc gccgccgacg
     3601 gtgcgggaaa cgtcgctcca ggtcgtgccc gccagcaggt agagcttggt ggtgtcgccg
     3661 gcgaacatct tcaccgcgcc ggcggtgccg cggaaccagg ccgcgccctg ggcgcgcgcg
     3721 gtcagggcgt tggtcacact gctgagcgca ttgagcggcc gatagctctc ctcggccggg
     3781 atgacgttca acgcctcgcg cgcccactgg ctgagatcgg gcatgtcggg gcgccattcg
     3841 gcgaagggga tcacgggcat cagaactcca tctccgccgc ggagcggccg accttgatgg
     3901 ggacgcgaaa gccgggctcg gacggcggcg cgacgttaaa gccgggcgtc g
//
LOCUS       DASWGA010000923         1958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_477040, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000923 DASWGA010000000
VERSION     DASWGA010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477040"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VF991_21300"
     CDS             <1..272
                     /locus_tag="VF991_21300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559044.1"
                     /translation="PPGTLLLLPTAPSIAPLRFLRGAAADRFYQTALTLSSVAGHAGL
                     PAVSLPIVALQECPLGLCALAGLGEDEALLAWTSRLEQESNVKFA"
     gene            357..839
                     /locus_tag="VF991_21305"
     CDS             357..839
                     /locus_tag="VF991_21305"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEX9559045.1"
                     /translation="MPENVPKPMTPSAFTPFGGEFDQLFDRMVRAWSFGLLEPAANGQ
                     PRALRAFDNAPKVEVQENGKTYTINVELPGLDQKDVKVVVEDDMLTVSGEKNVERVDE
                     KIHYTERNYGSFTRAFTLPSDADRNGITANFAKGVLTLQVPKSADSHQRAKEIEVRPS
                     "
     gene            complement(857..>1958)
                     /locus_tag="VF991_21310"
     CDS             complement(857..>1958)
                     /locus_tag="VF991_21310"
                     /inference="COORDINATES: protein motif:HMM:NF024592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4010 domain-containing protein"
                     /protein_id="HEX9559046.1"
                     /translation="AIAAGGELLLAAAALGVVAFAGLSYWRARDSDPGLTTETALVLV
                     TLLGGLAIREPAFAAALGVVVAVLLAARSALHRFVRAVLTDQEISSLLIFAGATLVVL
                     PLLPDRAIGPYGALNLHTIWIVVILVMAVSALGYIAVRAVGVHFGLALAGLASGFISS
                     SATIATMGARAKSDQALLSPAVAGAVLSSVATVVQLAILIAVTSMETLQAFWLPLVLS
                     GMVAALYGGGFTLWALEHTAEKREQAGSAFSLVTALTFAAILAVVLFAAAAAQHWFGE
                     TGVVVAGAVVGFADTHSAAISVASLVTDKKIEASLAIIPILAAFTTNTVTKIVFAVTA
                     GGRTFAVYVIPGLILMAAAAWAGAFIAGPLRF"
BASE COUNT          372 a          647 c          661 g          278 t
ORIGIN      
        1 tgccgcccgg cacgttgctc ctgctgccca ctgcgccgtc cattgcgcca ttgcgcttcc
       61 tgcgcggcgc tgctgccgat cgcttctacc aaacggcgct cactctgagt tccgtggcgg
      121 gccatgccgg cctgccggca gtgagcctgc ccatcgtcgc tttgcaagaa tgcccgctcg
      181 gtctctgcgc attggcaggg ctgggcgaag atgaggcgct gctcgcttgg acgtcccgcc
      241 tcgagcaaga atcgaacgtg aagtttgcat gaatgtcgcg gcatccaaat cggctgtgct
      301 agcattacct cgagcggggc acacatttcc gaatccatga accgaggagg acggcaatgc
      361 ccgagaacgt tcccaaaccc atgacgccca gcgctttcac gccgtttggc ggcgaattcg
      421 accagctctt cgatcgcatg gtgcgggcct ggtcgttcgg cctgctcgag ccggccgcca
      481 acggccagcc gcgcgccctg cgcgccttcg ataacgcccc gaaagtcgag gtccaggaga
      541 acggcaagac ctacaccatc aacgtcgagt tgccgggcct cgaccagaag gatgtgaagg
      601 tcgttgtcga ggatgacatg ctgaccgtgt ccggtgaaaa gaacgtcgaa cgggtcgacg
      661 agaaaatcca ctacaccgag cgcaactacg gcagcttcac gcgggccttc accctgccgt
      721 ccgacgccga ccgcaacggc atcacggcga acttcgccaa gggcgtgctg accttgcagg
      781 ttcccaagtc cgccgacagc caccagcggg ccaaggaaat cgaggtcagg ccgtcctgag
      841 gtcttggaac cgcacgctag aagcgaaggg ggccggcgat gaaagcgccg gcccaggccg
      901 cggccgccat caggatcagg ccggggatca catagacagc gaaggtgcgc ccgcccgcgg
      961 tgacggcgaa gactatcttg gtgacagtgt tggtggtgaa ggccgcgaga atggggatga
     1021 tcgccaacga cgcttcgatc ttcttgtccg tcaccagcga ggccaccgag attgcggccg
     1081 aatgggtgtc ggcgaatcct acgaccgccc ccgccacgac aacgccggtc tcgccgaacc
     1141 aatgctgggc tgcggcggcg gcgaacagga cgaccgcaag gattgcggcg aaggtgagcg
     1201 ccgtgacaag gctgaaggcg ctgccggcct gttcacgctt ctcggcggta tgttccaggg
     1261 cccacagggt gaagccgccg ccatagagag cggccaccat gccggacaaa accagcggca
     1321 gccagaacgc ctgtagcgtt tccatgctgg tgacggcgat caggatggca agttgcacga
     1381 cggtggcgac ggaggaaaga acggcgccgg ccaccgccgg gctcagcagc gcctggtcgc
     1441 tcttggcccg tgcgcccatc gtggcgatgg tggcgctgct cgagatgaag cccgaggcca
     1501 ggcccgccag cgccaggccg aagtgcacgc cgaccgcgcg gacggcgatg tagcccagcg
     1561 cgctcaccgc catcaccagg atcaccacga tccagatcgt gtgcaggttg agcgcgccgt
     1621 aggggccgat cgcacggtcg ggcagcaggg gcagcaccac cagggtggcg ccggcgaaga
     1681 tcaggagact gctgatctcc tggtcggtca gcacggcgcg cacgaagcga tgcaacgccg
     1741 agcgggcggc gagcagcacg gccacgacga cacccagcgc cgccgcgaaa gcgggttcgc
     1801 ggatcgccag cccgccgagc agggtcacga gcaccagggc cgtctcggtg gtgaggccgg
     1861 gatcgctgtc gcgtgcgcgc cagtatgaca ggccggcgaa ggccacgact cccagcgcgg
     1921 cggccgcgag cagcagctcg ccgccggcgg cgatggcg
//
LOCUS       DASWGA010000924         2636 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2249156, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000924 DASWGA010000000
VERSION     DASWGA010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2249156"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..540)
                     /locus_tag="VF991_21315"
     CDS             complement(<1..540)
                     /locus_tag="VF991_21315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011160345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559047.1"
                     /translation="MSFAKTIRYTGALTAAVGLTVAALAIAQAQAPAPLKIGVTEGFS
                     GVYADLNLGEVEAAQMAVDDFGGKVLGRPIEILSADHQTKPDVGAAIARRWYDVDGVK
                     MITGLGTSSVALAVRKIAQEKGMIDINTGAASADLTGPACSETGAHWVYDTYALAKVT
                     GGAIVKGGGDSWFFLTADYA"
     gene            663..1421
                     /locus_tag="VF991_21320"
     CDS             663..1421
                     /locus_tag="VF991_21320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9559048.1"
                     /translation="MAEEDVILEAEGLTKEFKGFVALKNVDLRVRRHTIHALIGPNGA
                     GKTTCFNLLTHFLVPTAGRIHFKGRNITGSSPAAIARLGLARSFQISAVFPHLSVREN
                     VRVALQRKLGNSFQFWRSEAVLEKLDGRAMELVAAVGLTAFAELPAVELPYGRKRALE
                     IATTLALEPEMMLLDEPMAGLGQEDIKRIAALIRAVAKDRTVLMVEHNMSVVADLSDT
                     ITVLARGEVLAEGPYATVSRDPAVVEAYVGTGHG"
     gene            1414..2133
                     /locus_tag="VF991_21325"
     CDS             1414..2133
                     /locus_tag="VF991_21325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9559049.1"
                     /translation="MAEALPKVPLLKVDGLQAWYGESHILHGVGFEIGRGELVTLLGR
                     NGAGKTTTLKSVMGIVERREGSVTFEGRETVGHPSDAIARLGLAYCPEERGIFSSLNV
                     EENLLLPPLVKPGGMSLSEIYQLFPNLQERRRSQGTKLSGGEQQMLAIGRILRTGATL
                     LLLDEPTEGLAPVIVQRIGEIIRQLKGRGFTILLVEQNFHFAATVADRHYVMEDGRVV
                     DMIASADVQQSIGKLQAYLGV"
     gene            2137..>2636
                     /locus_tag="VF991_21330"
     CDS             2137..>2636
                     /locus_tag="VF991_21330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012707178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9559050.1"
                     /translation="MAQVALGLVNGAFYAMLSLGLAVIFGMLNVINFTHGAQFMMGAF
                     AAWLLLGTLDVPFWASLVLAPLIVGLFGVVIERLMLKRIYHLDHLYGFLLTFGLALII
                     EGLFQWKWGSSGAPYPAPISGSTDLGFMFMPNYRLFVVVAALIICLATWYGIERTKLG
                     AYLRAAT"
BASE COUNT          422 a          879 c          863 g          472 t
ORIGIN      
        1 cgcgtagtcg gcggtgagga agaaccacga atcgccgccg cccttgacga tggcgccgcc
       61 ggtcaccttg gccagcgcat aggtgtcgta gacccagtgc gcgccggtct ccgagcaggc
      121 cgggcccgtc aggtcggccg acgccgcgcc ggtgttgatg tcgatcatgc ccttttcctg
      181 ggcgatcttc cgcaccgcga gggccaccga ggaggtgccg aggccggtga tcattttcac
      241 gccatcgacg tcgtaccagc gacgggcgat cgcggcgccg acatcgggct tggtctgatg
      301 gtcggccgac aggatctcga tcggccggcc gagcaccttg ccgccgaaat cgtcgaccgc
      361 catctgcgcg gcctcgacct cgccgaggtt gagatcggcg tagacaccgg agaatccttc
      421 cgtcacgccg atcttgagcg gcgcgggcgc ctgggcctgc gcgatggcga gggcggcaac
      481 ggtcagcccg accgcggccg tcagcgcgcc ggtgtaccgg atggttttgg caaaactcat
      541 aactctaatc cttccagaag cggttccccc cgcaaggcgc gaaatctagc gaccgtgcgc
      601 gccccgcgcc agtgctgctg gacagcggcg ccaagcttcg attaattcgc cataggaagc
      661 gcatggctga agaagatgta attctcgagg cggaagggct gacgaaggag ttcaagggct
      721 tcgtcgcgct caagaacgtc gatctgcgcg tccggcgcca taccattcat gccctgatcg
      781 ggcccaatgg cgccggcaag acgacctgct tcaacctgct cacccatttc ctcgtcccga
      841 cagcgggccg catccacttc aagggccgca acatcaccgg cagctcgccg gcggcgatcg
      901 cccgcttggg gctcgcccgc tcgttccaga tctccgccgt cttcccccat ctttcggtgc
      961 gcgagaacgt ccgtgtcgcc ctgcaacgca agctcggcaa ttctttccaa ttctggcggt
     1021 ccgaagcggt cctggaaaag ctcgacggcc gggcgatgga actggtcgcc gcggtcgggc
     1081 tgacggcctt tgccgagttg ccggcggtcg agctgcccta tggccgcaag cgggcgctcg
     1141 agatcgccac cacgctggcg ctcgagcccg agatgatgct gctcgacgaa ccgatggcgg
     1201 ggctcggcca ggaagacatc aagcgcatcg ccgcgctgat ccgcgcggtc gccaaggatc
     1261 gcaccgtgct gatggtcgag cacaacatgt ccgtcgtcgc cgatctctcc gataccatca
     1321 cggtgctggc gcgcggcgag gttttggccg aggggcccta cgccacggtg tcgagggatc
     1381 ccgccgtggt cgaggcctat gtcgggaccg gccatggctg aggcattgcc caaggtcccc
     1441 ttgctcaagg tggacggcct gcaggcctgg tacggcgaat cgcatatcct gcacggggtg
     1501 ggcttcgaga tcggccgcgg cgagctggtg accctgctgg ggcgcaacgg cgccggcaag
     1561 acgacgacgc tgaaatcggt catgggcatc gtcgagaggc gcgagggttc ggtgaccttc
     1621 gaaggccgcg agacggtagg ccatccgtcc gatgcgatcg cccggctggg gcttgcctac
     1681 tgccccgagg agcgcggcat cttctccagc ctcaatgtcg aggagaacct gttgctgccg
     1741 ccgctggtca agccgggcgg catgagcctc agcgagatct atcagctgtt tcccaacctg
     1801 caggagcggc ggcgcagcca gggcaccaag ctgtcgggcg gcgagcagca gatgctggcg
     1861 atcggccgca tcctgcgcac cggggccacg ctgctgctgc tcgatgaacc gaccgagggg
     1921 ctggcgccgg tcatcgtcca gcgcatcggc gagatcatcc gccagctcaa gggccgcggc
     1981 ttcaccatcc tgctggtcga gcagaatttc cacttcgccg ccaccgtcgc cgaccgccac
     2041 tacgtgatgg aggacggccg cgtcgtcgac atgatcgcct cggccgacgt gcagcagagc
     2101 atcggcaagc tgcaagccta tctgggagtg tgagggatgg cacaggtcgc gctcggcctc
     2161 gtcaacggcg ccttctacgc catgttgagc ctcgggcttg ccgtcatctt cggcatgctg
     2221 aacgtcatca acttcacgca tggcgcgcaa ttcatgatgg gcgccttcgc cgcctggttg
     2281 ctgctcggca ccctcgacgt gccgttctgg gcgtcgctgg tgctggcgcc gctgatcgtc
     2341 ggcctgttcg gcgtcgtgat cgaacggctg atgctgaagc ggatctacca tctcgaccat
     2401 ctctacggtt tcctgctgac cttcggcctg gcgttgatca tagagggact tttccagtgg
     2461 aagtgggggt cgtccggggc gccttatccc gcgcccatct cgggcagcac ggacctgggc
     2521 ttcatgttca tgcccaatta ccgcctgttc gtcgtggtcg cggccctgat catctgcctc
     2581 gccacctggt acggcatcga acgcaccaag ctcggtgcct acctgcgcgc ggcgac
//
LOCUS       DASWGA010000925         3899 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_349366, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000925 DASWGA010000000
VERSION     DASWGA010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3899
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349366"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..347)
                     /locus_tag="VF991_21335"
     CDS             complement(<1..347)
                     /locus_tag="VF991_21335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559051.1"
                     /translation="MTNRLVEDHAPSLPLTLVDALAFWLRNQFVFWLTALPIAGLGAG
                     VTYVLEADRQFIDWRNHWGWDFLFALIYAMFLDRWIKESLLEGASPCDEVDELRRSTI
                     AVRFLTFAAVLCLL"
     gene            complement(372..1388)
                     /locus_tag="VF991_21340"
     CDS             complement(372..1388)
                     /locus_tag="VF991_21340"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEX9559052.1"
                     /translation="MFETTLAGSLPKPSWLATPNVLWAPWTLSGPPLFEAKDDATLLA
                     IRRQEEAGIDIVSDGEQARQHFVHGFLAEVDGVDFDKKVRMGIRNNRYDADCPTVTAK
                     LKRRRFVHEREARVARAATQRKLKFTLPGPMTLIDTLADGYYGDRVKMAFAFAELLNQ
                     EARDLERLGVDVVQFDEPAFNVYLGETIEWGVPALEKAAEGLKCATAVHICYGYGIEA
                     NIKWKQTLGDSWRQYEQTFPALDRSKIEQVSLECRQSHVPPELMKLLKTKTVLVGAID
                     VASNKIETPEQVAETLKLATKFVDAERIQACTNCGMAPMTLAVAYGKLRALAQGAALA
                     RKTL"
     gene            complement(1398..2795)
                     /locus_tag="VF991_21345"
     CDS             complement(1398..2795)
                     /locus_tag="VF991_21345"
                     /inference="COORDINATES: protein motif:HMM:NF018875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis HemY N-terminal
                     domain-containing protein"
                     /protein_id="HEX9559053.1"
                     /translation="MTILRTLIWFVIAAAAMLGAVWLAERPGTVTAEWHGWRLDTSVG
                     ALLVAIIVLILVCLALWLLYRWIVGAPGALLEGWGESRRRRGYRELTQGLAAVAAGDG
                     VEAQKHARKAEQLLSEPPLTLLLSAQAAQLTGDRESAARAFSAMLDDEQTAFLGLRGL
                     IGQALREGDQAKALAYAERAFRLRPQTPWVVHSLFDMQAQIGQWEAAQETLDTGLRRK
                     VVTQDKGRTLKALLLVERSRAAEHNGGAADALALAREAFGLAPERIAVSSRLAELQIK
                     TGDSKRAMKTLERGWALAPHPDLAELYVKASGETEALKRVGVVRRLVSQKPDDIEGHL
                     ALAQASLDAGLWGEARRHLEAAGGVNPTVRVCRMMAEVEERAQSDQAKVHEWLARATH
                     APADRAWRCSACGAHHESWRSVCENCGAFGTLHWRAPGTFGHVLTPEAETALTPSPAG
                     PPGHLARLAGEAGRG"
     gene            complement(2800..>3899)
                     /locus_tag="VF991_21350"
     CDS             complement(2800..>3899)
                     /locus_tag="VF991_21350"
                     /inference="COORDINATES: protein motif:HMM:NF021264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="mitofilin family membrane protein"
                     /protein_id="HEX9559054.1"
                     /translation="DAQPVKVRRGLGVFGAFLTGLIAAVTVLAAALISLPYWPPEARA
                     LWPGQAVPPPAPKPGADLATVRAEATKIANTAVDAAKRELNGRLDDLEKRLRALSATA
                     AERPAAADPAIGELRSKVEALENRPAAQPPAATSAGDADKEVAALRTDIAGLRTALQT
                     LDQAVSLQREQTKTLSDAVGNRGAAEQKALTAARASAVIGIAARLSSALDSGLPFAGD
                     LALLMPLIQGDAKLGEIATALQPYAQTGVASRAALTADFPAVAKAALADDLADDSFGE
                     RLLGKLKSIVSLRRVGDVQGDSVEAKLARAEAALDGSDLAKAVEIVKSLPAQTAKATA
                     AWLARAETHLAAKRGVDQLAAHAVALLGTAR"
BASE COUNT          588 a         1326 c         1370 g          615 t
ORIGIN      
        1 agcaggcaga ggaccgcggc aaaggtgagg aaacgcacgg cgatggtcga acggcgcagc
       61 tcgtcgactt catcgcacgg gcttgcgccc tcgagcagcg attccttgat ccagcgatcg
      121 agaaacatgg cgtagatcag cgcgaacagg aaatcccaac cccaatggtt gcgccagtcg
      181 atgaattgcc ggtcggcttc gagcacgtag gtgacgccgg cgccgaggcc cgcgatcggc
      241 aaggccgtca gccagaacac gaattgattg cgcagccaga aggcgagcgc atcgaccagc
      301 gtgagcggaa gcgacggcgc gtggtcttca acgagtcggt tggtcatcgc actcccaact
      361 acagaggccg gctacagggt cttgcgcgcc aacgcggcgc cctgtgcaag tgcccgcagc
      421 ttaccgtaag cgacggccaa cgtcatcggc gccatgccgc aattggtgca ggcctggatt
      481 cgttcagcgt cgacgaactt tgttgcgagc ttcagagtct ccgcaacttg ttccggcgtc
      541 tcgatcttgt tcgaagcgac atcgatcgcg ccgaccagca cggtcttggt cttcaagagc
      601 ttcatcagct caggcggcac gtggctttgg cggcattcga gcgagacctg ctcgatcttg
      661 ctgcgatcga gtgcggggaa ggtctgttcg tactggcgcc agctgtcgcc cagcgtctgc
      721 ttccacttga tattggcctc gatgccgtag ccgtagcaga tgtgcacggc ggtggcgcat
      781 ttgagaccct cggcggcctt ctccagcgcc ggcacgcccc attcgatggt ctcgccgaga
      841 tagacgttga aggcgggttc gtcgaactgc acgacatcga cgccgagtct ctcgaggtcg
      901 cgcgcctcct ggttcaaaag ctcggcgaag gcgaaggcca tcttcacgcg atcgccgtag
      961 tagccgtcgg ccagggtgtc gatcagggtc atcggcccgg gcagggtgaa tttgagcttg
     1021 cgctgggtgg cggcgcgggc gacgcgcgcc tcgcgttcgt gcacgaaacg ccggcgcttg
     1081 agcttggcgg tgacggtcgg gcaatcggca tcatagcggt tgttgcggat gcccatgcgc
     1141 accttcttgt cgaagtcgac gccgtcgacc tcggccagga agccgtgcac gaaatgctgc
     1201 cgcgcctgct cgccgtcgct cacgatgtcg atgccggcct cttcctggcg gcggatggcg
     1261 agcagggtgg cgtcgtcctt ggcctcgaac agcggcgggc cgctcaaggt ccagggcgcc
     1321 cacagaacgt tgggcgtggc cagccacgaa ggcttgggca ggctgcctgc cagcgtcgtc
     1381 tcgaacatgt tccctcccta ccccctaccg gcctcccccg ccaagcgggc gaggtggccc
     1441 ggagggccgg cgggggaagg cgtcagggcc gtctcggcct cgggcgtcag gacgtgaccg
     1501 aacgtgccgg gcgcgcgcca atgcagcgtg ccgaacgcac cgcaattctc gcagaccgag
     1561 cgccagctct cgtgatgggc gccgcaggcc gagcagcgcc aggcgcgatc ggctggcgcg
     1621 tgggtcgccc gcgccagcca ctcatgcacc ttggcctggt cggactgcgc gcgctcctcg
     1681 acttccgcca tcatgcggca gacgcggacc gtcgggttga cgcccccggc cgcctcgaga
     1741 tggcgccgcg cctcgcccca cagcccggca tccagggagg cctgagccag cgccagatgg
     1801 ccttcaatgt cgtcgggttt ttgcgagacc agccgtcgca cgacgccgac tctcttcaag
     1861 gcctcggtct cgcccgacgc cttgacatag agttcggcga gatcgggatg gggcgccaat
     1921 gcccagccgc gctcgagcgt tttcatggcg cgcttgctgt cgcctgtctt gatctgcaac
     1981 tcggccagcc ggctgctgac cgcgattcgc tccggcgcca ggccgaacgc ctcgcgcgcc
     2041 agcgccagcg cgtcggcggc accgccattg tgctcggcgg cgcggctgcg ctcgaccagc
     2101 agcaaggctt tcaaggtgcg acccttgtct tgcgtcacga ccttgcggcg caggccggta
     2161 tccagcgtct cctgggccgc ctcccattgg ccgatctgcg cctgcatgtc gaacagcgag
     2221 tggaccaccc acggcgtctg cggcctcagc cgaaaggcgc gctcggcgta ggccaacgcc
     2281 ttggcctgat cgccctcgcg cagcgcctgg ccgatcaagc cgcgcaggcc gaggaaggcc
     2341 gtctgttcgt cgtcgagcat ggcgctgaaa gcgcgcgcgg cgctttcgcg atcgccggtg
     2401 agctgggccg cctgtgccga cagcagcagc gtgagcggcg gctcggacag cagctgctcg
     2461 gccttgcgcg catgcttctg cgcctccacc ccgtcgccgg ccgcgaccgc cgccaggccc
     2521 tgggtcaact cgcggtagcc gcggcgacgg cggctctcgc cccagccttc gagcagcgcg
     2581 ccgggcgcgc cgacgatcca gcggtagaga agccacaggg cgagacagac caggatcagg
     2641 acgatgatgg cgacgagcag cgcgccgacg ctggtgtcca gacgccagcc gtgccattcg
     2701 gcggtcaccg tgccgggccg ttcggcgagc caaaccgcgc ccagcatggc ggcggcggcg
     2761 atgacgaacc agatcagcgt gcgcaggatg gtcatcggat caacgcgccg tgccgagcag
     2821 cgccacggca tgggccgcca gctggtcgac gccgcgtttg gcggcgagat gcgtctcggc
     2881 gcgcgccagc caggccgccg tggccttggc ggtctgcgcc ggcaaggact tcacgatctc
     2941 gacggccttg gcgaggtcgc tgccatcgag ggcggcttcg gcgcgggcaa gcttggcttc
     3001 caccgaatcg ccctgcacgt cgccgacccg gcgcagcgag acgatgctct tgagcttgcc
     3061 taaaagccgc tcgccgaacg aatcgtcggc aaggtcgtcg gccagggccg ctttggcgac
     3121 ggcgggaaag tcggcggtaa gggcggcgcg cgaggcgacg cccgtctggg cataaggctg
     3181 cagcgccgtg gcgatctcgc cgagcttggc gtcgccctgg attagcggca tcagcagggc
     3241 gagatcgccg gcgaacggca ggccggagtc gagcgcggag ctcagccgcg cggcgatgcc
     3301 gatcaccgcc gaggcgcgtg ccgcggtaag cgccttctgc tcggccgcgc cgcggttgcc
     3361 cacggcatcg ctcagcgtct tggtctgctc gcgctgaagg gaaaccgcct gatcgagcgt
     3421 ctgcagggcg gtgcgcaggc cggcgatgtc ggttcgcagc gccgctacct ccttgtcggc
     3481 gtcgccggcc gatgtcgcgg cgggcggctg ggccgccggc cggttctcca gcgcctcgac
     3541 cttgctgcgc aattcaccga tcgccgggtc ggccgcggcc ggccgttcgg cggctgtggc
     3601 cgagagcgcg cgcaggcgct tttcgagatc gtcgaggcgg ccgttgagct cgcgcttggc
     3661 ggcatcgacc gcggtattgg cgatcttggt ggcctcggcg cgcacggttg ccaagtcggc
     3721 gcccggcttg ggcgcgggcg gcggaacggc ctggccaggc catagcgcgc gcgcctctgg
     3781 cggccagtag ggcagtgaaa tcagcgccgc ggccagcacg gtcacggcgg cgatcaggcc
     3841 cgtcaggaag gcgccgaaca cgccgagacc gcggcggacc tttaccggct gagcgtcga
//
LOCUS       DASWGA010000926         1707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_995680, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000926 DASWGA010000000
VERSION     DASWGA010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_995680"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..298
                     /locus_tag="VF991_21355"
     CDS             32..298
                     /locus_tag="VF991_21355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559055.1"
                     /translation="MDRQSFEAGLKRDGYEILTNTTPGVKVNPEHSHPFDVRAMVLKG
                     AITITSGSQAKTYRPGDTWDLARGCLHAESYGPEGAVVLLGRKS"
     gene            362..>1707
                     /locus_tag="VF991_21360"
     CDS             362..>1707
                     /locus_tag="VF991_21360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559056.1"
                     /translation="MASGDEVLRCAQDDRRAPAWQLLLTFVLSLVALCSLIAWLQNVH
                     IVTTNGMYKSIQAEPWIADPARASLDPSNYLYFPLYGALSRGLDALGILRGVPWKQFA
                     YLNALWASLCVVFVYAFIYRVTANAWAAVLAAAFHLGSGYFLLLSVINEDIMPGYALV
                     LGAMVLAGLWFDRPTDSRVGLVGLLFTLGWLIEWRLIFPTLPALVLALALSDGRLLQR
                     LRRIGTLLATILAVSGLVQLLWEGHNGAVGLLDILWTGKGVLTGWAGLSWDKASMMLS
                     GIGNYFLIVGGWVDPLSAKQAAAPLAVSVFLQMAIFVASVVVLWPRRSDRRLRAIAVV
                     FLGTLGAGQVLNIYSQPQDPQMQINVMPWLTVAWGLLLGALIPRSRVVAAVLAVLSLM
                     PLAWNAGQLARFRGGDTVAVAALAALEQRFPPASTVFVYWGFEPITTWQYALWSHT"
BASE COUNT          251 a          546 c          570 g          340 t
ORIGIN      
        1 cgcaagggcg cgtgaacgaa aggggatgga tatggaccga cagagctttg aagccgggct
       61 gaagcgcgac ggctatgaaa tcctcaccaa caccacgccg ggcgtgaagg tgaatcccga
      121 gcacagccat ccgttcgacg tcagggcgat ggtgctgaag ggcgccatca ccatcacgtc
      181 gggcagccaa gccaagacct ataggcccgg cgacacctgg gacctggcgc gcggctgcct
      241 gcatgcggag agctatggtc cggaaggcgc agtggtcctg ctcggccgca agtcctagca
      301 cttcgtctgt cgtcctgagc gaagcgctgt catcctgagc gaagcgaagg atctcatccc
      361 tgtggcgagc ggcgatgagg tccttcgctg cgctcaggac gacagaaggg caccggcctg
      421 gcagctcttg cttacgttcg tgctgtcgct cgtggcgctg tgcagcctga tcgcctggct
      481 gcagaacgtc cacatcgtca ccaccaacgg catgtacaaa agcatccagg ccgagccctg
      541 gatcgccgat cccgcccgcg ccagcctcga tccgtcgaac tacctctact tcccgctcta
      601 cggcgccttg agccgcggcc tcgatgcgct gggcatcctg cgcggggtgc cgtggaagca
      661 gttcgcctat ctcaacgcct tgtgggcgag cctctgcgtc gtctttgtct acgccttcat
      721 ctaccgcgtg accgcgaacg cctgggcggc ggtcctggcg gcagccttcc atctgggaag
      781 cggctatttc ctcctgctgt cggtcatcaa cgaggacatc atgccaggct acgccctggt
      841 cctgggtgcg atggtgttgg ccggcctgtg gttcgaccgg ccgaccgaca gccgggtcgg
      901 actggtcggc ctgctcttca ccttgggctg gctgatcgaa tggcggctga tcttcccgac
      961 ccttcccgcc ttggtgctgg cgctcgcgtt gtcggacggg cggctgctgc agcggctgag
     1021 gcggatcggc accttgctcg cgacgatcct ggccgtctcg ggactcgtgc agctcctgtg
     1081 ggagggccac aacggcgccg tcgggctttt ggacatcctg tggaccggca agggcgttct
     1141 gaccggctgg gcagggctgt cctgggacaa ggcctcgatg atgctttccg gcattggcaa
     1201 ctatttcctg atcgtcggcg gctgggtcga tccgctgtcg gccaagcagg cggccgcgcc
     1261 gcttgccgtg tcggtctttc tgcagatggc catcttcgtt gccagcgtcg tggtgttgtg
     1321 gccgcgtcga agcgaccgaa ggctgcgcgc tatcgcggtc gtcttcctcg gcaccctggg
     1381 tgcaggccag gtgctgaata tctattcgca gccgcaggat ccgcagatgc agatcaacgt
     1441 catgccgtgg ttgacggtgg cgtggggcct gctgctgggg gcgttgatcc cgagatcgcg
     1501 cgtcgtggct gcggtcctcg ccgtgttgtc attgatgccg ctcgcctgga acgcaggcca
     1561 actcgcacgc tttcgcggcg gcgacacggt ggcggtggca gcacttgccg cgctcgagca
     1621 gcgctttccg ccggcgtcga cggtgttcgt ctattggggc ttcgagccga tcacgacctg
     1681 gcagtacgcc ctgtggagcc acacctg
//
LOCUS       DASWGA010000927         2403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_745893, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000927 DASWGA010000000
VERSION     DASWGA010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_745893"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..778
                     /locus_tag="VF991_21365"
     CDS             <1..778
                     /locus_tag="VF991_21365"
                     /inference="COORDINATES: protein motif:HMM:NF039902.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEX9559057.1"
                     /translation="QAQLYQACGWSTPSFAHIPLIHGADGAKLSKRHGALGVDAYREM
                     GYLPEALRNYLLRLGWGHGDAEIIPTEQAIEWFDLAGVGRSASRFDLAKLTNLNAHYL
                     REMADAELLPMVLPRIEAAIGGKLDPVGLERITRGLDGVKQRSRTLVELADNLVFYAR
                     SGTPPIADDKARGQLTVEAKTLLAKLAAALEAEAANWSEKQVEDAIRRFAESQGVKLG
                     QVAQPLRVALTGSTVSPGIFEVLAILGPAETRARLLAASG"
     gene            899..2197
                     /gene="gltA"
                     /locus_tag="VF991_21370"
     CDS             899..2197
                     /gene="gltA"
                     /locus_tag="VF991_21370"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018097750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEX9559058.1"
                     /translation="MAKSTATLTDNETGKSYEMPIIHGTIGPRLVDVRKFYGDSGMFT
                     YDPGFTSTGSCASTITYIDGDEGILLYRGYNIAELAEQSDFMECCYLLMKGELPNKPQ
                     KEKFVRDITNHTMVHEQLSQFYRGFRRDAHPMAVCCGVVGALSAFYHDSLDIHDPHQR
                     MVASYRLIAKMPTIAAMAYKYSIGQPFVYPRNDLSYAANFLRMMFSVPAEEYEVNPVL
                     EKAVDRILMLHADHEQNASTSTVRLAGSSGANPFACIAAGIASLWGPSHGGANEAVIN
                     MLNEIGGKQNIPGFLSRVKDKQDHTRLMGFGHRVYKNYDPRAKVMRQTCHEVLTSLGI
                     EHDPLLELAMEMEQIALKDDYFISKKLYPNVDFYSGIIFRAIGIPTSMFTVLFAVART
                     VGWISQWNEMIEDPDQKIGRPRQLYNGQTERPYKPLHLRN"
BASE COUNT          457 a          825 c          725 g          396 t
ORIGIN      
        1 ccaggcccag ctctatcagg cttgcggctg gagcacgccg tcattcgccc atattccgct
       61 gatccacggc gccgacgggg ccaaactatc gaagcgtcac ggcgccttgg gcgtcgacgc
      121 ctatcgcgag atgggctacc tgcccgaggc cctgcgcaac tacctgctcc gactcggctg
      181 gggccatggc gacgcggaga tcatcccgac cgagcaggcg atcgaatggt tcgaccttgc
      241 cggcgtcggc cgctcggcct cgcgcttcga cctcgccaag ctcaccaacc tcaacgcgca
      301 ttacctgcgc gagatggccg atgccgagct ccttcccatg gtgctgccgc gcatagaagc
      361 cgcgatcggc ggcaagcttg atcctgtcgg cctggagcgc atcacgcgcg gtctggatgg
      421 cgtaaaacag cgctcgcgca cgctggtcga gctggccgac aacctcgtct tctacgcccg
      481 cagcggcaca ccgccgatcg ccgacgacaa ggcgcgcggc cagctcacgg tcgaggccaa
      541 aacgctgctc gccaagctcg cggcggcact cgaggccgag gccgccaact ggagcgagaa
      601 gcaggtcgag gacgcgatcc gccgctttgc cgagagccaa ggcgtgaagc tcggccaggt
      661 tgcccagccc ttgcgcgtgg cgctgaccgg ctcgaccgtg tcgcccggca tcttcgaggt
      721 gctggcgatc ctggggccgg ccgaaaccag ggcgagattg ctggccgcca gcggctaaaa
      781 cggcgcgccg gtgccggcga tgccccgcga aatagcggtt tggctgtaca attgcgcctc
      841 cggaggcggc ttgttagggt gccgccgaac ccgccaattc gagccgaaag agttgaaaat
      901 ggccaaatcg accgcgacgc tcaccgacaa cgaaaccggc aaatcctacg aaatgccgat
      961 catccacggg accatcgggc cgcgtctggt cgacgtccgc aagttctacg gcgattcggg
     1021 gatgttcacc tacgacccgg gtttcacctc gaccggctcg tgcgcttcca cgatcaccta
     1081 catcgacggc gacgaaggca tcctgctcta tcgcggctac aacatcgccg agctcgccga
     1141 gcagagcgat ttcatggagt gctgctatct cctgatgaag ggcgagctgc cgaacaagcc
     1201 gcagaaggaa aaattcgtca gggacatcac caaccacacg atggttcacg agcagctcag
     1261 ccagttctat cgcggcttcc ggcgcgacgc ccatccgatg gcggtgtgct gcggcgtggt
     1321 cggcgcgctc tcggccttct atcacgactc cctcgacatc cacgatccgc accagcgcat
     1381 ggtcgcttcc taccggctga tcgccaagat gccgaccatc gccgcgatgg cctacaagta
     1441 ttcgatcggc cagcccttcg tctatccgcg caacgacctg agctacgccg ccaacttcct
     1501 gcgcatgatg ttctccgtgc cggccgagga atacgaggtc aatccggtgc tcgagaaagc
     1561 ggtcgaccgc atcctgatgc tgcatgccga ccacgagcag aacgcctcga cgtcgaccgt
     1621 ccgccttgcc ggctcgtcag gcgccaatcc attcgcctgc atcgccgccg gcatcgcctc
     1681 gctgtggggc ccgagccacg gcggcgccaa cgaggccgtg atcaacatgc tgaacgagat
     1741 cggcggcaag cagaacatcc cgggcttcct gtcgcgggtc aaggacaagc aggaccatac
     1801 ccgcctgatg ggcttcggcc atcgcgtcta caagaactac gatccacgcg ccaaggtcat
     1861 gcgccagacc tgccacgagg tgctgacctc gctcggcatc gagcacgatc cgctgctcga
     1921 gctcgccatg gagatggagc agatcgcgct caaggacgac tacttcattt ccaagaagct
     1981 ctatcccaat gtcgatttct actccggcat catcttccgg gcgatcggca tcccgacttc
     2041 gatgttcacc gtgctgttcg ccgtggcgcg gacggtcggc tggatctcgc aatggaacga
     2101 aatgatcgaa gatcccgacc agaagatcgg ccggccgcgt cagctctaca acggccagac
     2161 cgagcggccc tacaagccgc tgcatttgcg gaactaagtc gctatccggg gggaaagcga
     2221 gaggacatgg caagatcgtc gcatggacca cgccaggcaa cgacctgggc agtcactcac
     2281 aaaccgcggc cggtgccgcg cgttgtgcgg ctcggccggc cggcaaacga caatttccgc
     2341 caacccagcg tgctggtgcg cctgttcgtg gtggccctgg cggccgcgct cgcattgctg
     2401 gcc
//
LOCUS       DASWGA010000928         2244 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2013130, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000928 DASWGA010000000
VERSION     DASWGA010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2013130"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VF991_21375"
     CDS             <1..248
                     /locus_tag="VF991_21375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="macro domain-containing protein"
                     /protein_id="HEX9559059.1"
                     /translation="ELLARCYRSSLALAEQHGLKSIAFPAISTGVYGYPRDQATEIAV
                     REVKAHAGGLDRVIFCCFGADMAALYRGVTARSASRP"
     gene            complement(220..795)
                     /locus_tag="VF991_21380"
     CDS             complement(220..795)
                     /locus_tag="VF991_21380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF924 family protein"
                     /protein_id="HEX9559060.1"
                     /translation="MTDSPSIRDVLDFWFLPLDDPGHGKPREVWWEGPAEFDAEIRFH
                     FGAAFDRAVDGAFDSWRQSPDGALALILLCDQFPRNMHRKTARAFAGDAKALETARVA
                     MARSYPAAFNPTMRLFFYMPFQHSEALSDQELGCALFAAFEDAELTKHALEHRDVITR
                     FGRFPHRNDVLGRACTQDELDYLKDAKRFGQ"
     gene            949..>2244
                     /locus_tag="VF991_21385"
     CDS             949..>2244
                     /locus_tag="VF991_21385"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEX9559061.1"
                     /translation="MGKVKNVLFIMCDQLRADHLSCAGHPHLKTPAIDGLARHGVLFP
                     RAYVQSGVCGPSRMSYYTGRYMFSHGATWNRVPLSVRERTIGDYLFPTGMRVALAGKT
                     HVLPDTDGLERYGIEGGSALAALMRTGRFEELDRYDGHSPPGTESGYAAYLRSHGYTS
                     DDPWSDYVISADGPDGKIVSGWHMRNVHLPARVAEEHSETAYMTREAMRFVDDMGERP
                     WFLHLSYVKPHWPYMAPAPYHALYGAKDCLPLNRDESEWADQHPVLAAYRRHEESQSF
                     QRPEAPGTVRPAYMGLIKQIDDWLGRLFDHLAKLGRFDDTLILFTSDHGDFLGDHWLG
                     EKEMFYEEALRVPFIVYDPDPAADPSRGTVDRRFVEAVDVVPTMLAALNQPPYEHLVE
                     GRSLLPLLRGGPTEGWRDAVFSELDYSFREARKLLGRKPQ"
BASE COUNT          372 a          745 c          744 g          383 t
ORIGIN      
        1 ccgagctgct ggcgcgctgc taccgcagca gcctggcgct cgccgagcag cacggcttga
       61 agagcatcgc cttcccggcg atctcgaccg gcgtctacgg ctatcccagg gaccaggcga
      121 cggagatcgc ggtgcgcgaa gtcaaggccc acgcgggcgg cctagatcgc gtgatcttct
      181 gctgcttcgg cgccgacatg gcggcgctct atcgcggcgt cactgcccga agcgcttcgc
      241 gtccttgaga tagtcgagtt cgtcttgcgt gcaggcgcgg cccagcacgt cgttgcgatg
      301 ggggaagcgg ccgaagcggg tgatgacgtc gcggtgctcc agagcgtgct tcgtaagctc
      361 cgcgtcctcg aaggcagcga acagggcgca gcccagctcc tggtctgaca gcgcctcgct
      421 gtgctggaac ggcatgtaga agaagagccg catggtggga ttgaatgccg ccggatagga
      481 ccgcgccatc gccacgcgcg ccgtctcgag cgccttggcg tcgccggcga aggcgcgcgc
      541 cgtcttgcga tgcatgttgc gtgggaactg gtcgcataaa aggatcaggg ccagcgcgcc
      601 gtcgggcgac tgccgccagg aatcgaaggc cccgtcgacc gcccggtcga aggcggcgcc
      661 gaagtggaag cggatctcgg cgtcgaactc tgccgggcct tcccaccaga cctcgcgcgg
      721 cttgccgtgg cccggatcgt cgagcggcag aaaccagaaa tcgaggacgt cgcggatgga
      781 cgggctatcg gtcattgaag caatgtagtc gctgtacgca cagtgtcatc ctgagcgaag
      841 cgaaggcctg ccctgagcgt agccgaaggg atctcatgcc cttggcaagc ggcgatgagg
      901 tccttcgctt acgctcagga cgacagatgt acttgggagg acacaagcgt gggcaaggtc
      961 aagaacgtcc tgttcatcat gtgcgatcag ctgcgcgccg atcacctgtc gtgtgccggc
     1021 catccgcatc ttaagacgcc cgcgatagac ggcttggccc gccatggtgt gctgttcccg
     1081 cgcgcctacg tgcaatcggg cgtctgcggt ccctcgcgca tgagctacta caccggacgt
     1141 tacatgttca gccatggcgc cacctggaac cgcgtgccgc tgtcggtgcg cgaaaggacg
     1201 atcggcgact acctgtttcc caccggcatg cgcgtcgcgc tggccggcaa gacgcatgtg
     1261 ctgcccgaca ccgacgggct ggagcgctac ggcatcgaag gcggctcggc gctggccgcc
     1321 ctgatgcgca cggggcgctt cgaggagctc gaccgctatg acggtcattc gccgcccggc
     1381 accgagagcg gctatgccgc ttatctgcgc tcgcacggct acacttccga cgatccgtgg
     1441 agcgactacg tcatctcggc cgacggtccc gatggcaaga tcgtatcggg ctggcacatg
     1501 cgcaacgtgc atctgccggc gcgcgtcgcc gaggagcatt ccgagaccgc ctacatgacc
     1561 cgcgaggcca tgcgcttcgt cgacgacatg ggcgagaggc catggttcct gcatctcagt
     1621 tacgtcaagc cgcactggcc ctacatggcg ccggcgcctt atcacgcgct gtacggcgcc
     1681 aaggactgcc tgccgctgaa ccgcgacgaa tcggagtggg ccgaccagca tccggtgctg
     1741 gcggcctatc gccggcacga ggaatcgcag tccttccagc gccccgaagc gcccggcacg
     1801 gtgcggccgg cctatatggg cctgatcaag cagatcgacg actggctcgg ccgcctgttc
     1861 gatcatctgg cgaagctcgg ccgcttcgac gacacgctga tcttgttcac ctcggaccac
     1921 ggcgattttt tgggcgacca ttggctgggc gaaaaggaga tgttctacga ggaggcgctg
     1981 cgcgtgccct tcatcgtcta cgaccccgac ccggccgccg atccttcgcg cggcaccgtc
     2041 gatcggcgct tcgtcgaagc tgtcgacgtc gtgccgacga tgctggccgc cctcaaccag
     2101 ccgccctacg agcacctcgt cgaaggccgc tcgctgttgc cgctattgcg cggcggcccg
     2161 accgagggct ggcgtgacgc ggtgttttcc gagctcgact attccttccg cgaggcgcgc
     2221 aagctgctcg gccgcaagcc gcag
//
LOCUS       DASWGA010000929         4914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2249401, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000929 DASWGA010000000
VERSION     DASWGA010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4914
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2249401"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VF991_21390"
     CDS             complement(<1..380)
                     /locus_tag="VF991_21390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559062.1"
                     /translation="MSARLAPSAAASPWRDPVALLAAPAVLYLLALYAMPLVWLLAKS
                     FVGPAGPTLGPYVDFFSDPFNWRVVGNTLSVAAWVTVVCLAVGYPASFALARAGAALQ
                     IAMLVAIILPLSIGVVVKAFAWQIV"
     gene            complement(377..1441)
                     /locus_tag="VF991_21395"
     CDS             complement(377..1441)
                     /locus_tag="VF991_21395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9559063.1"
                     /translation="METRSFLEVSQAEKSFGAATVLGGVDLGVDAGEFVSLLGPSGCG
                     KTTLLRIVAGLLAADRGTVRLDGENITAKPPHKRDVGVVFQNYALFPHLSVAENVAFG
                     LRARRRSTADTRETVRRFLDLVHLTEFADRSVRVLSGGQQQRVAVARALAVRPKLLLL
                     DEPFSALDRKLRETMQIELRRLLRELGTTSVFVTHDQDEALTMSDRIAVMNRGAIEQF
                     AAPEAIYRQPETAFVLEFVGLSTRLAGKVAVSMDGTVAVDTALGRLRGRGRFVIGADV
                     LLAVRPERIKVGESAENSATATVRDAVFQGSKVQLHFDARPGDQLMVETADLAGGAPS
                     SGTWLTLGWAVADTLVYPAP"
     gene            complement(1450..2502)
                     /locus_tag="VF991_21400"
     CDS             complement(1450..2502)
                     /locus_tag="VF991_21400"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9559064.1"
                     /translation="MPVNRNKLSRRRVLAGTGAAGLTMVGFPNIVRAQAKEVVVGGAA
                     SMASWMNGTFATFFQDKYKCKLTFEGTRSLVNLEKMQKNKDKQYLSVVLMDDPVMILA
                     VQEGLLEKLTPAAIPNLAKTRPNAIHMDGMWANYLQPWQGVATNTKAVPAGVATWAEL
                     YDAKYKGRLVLPSLQNTEGLANLVMAAHLETGKPIADAQFDIDAGFKKIKTLKPNILT
                     IYTQIPQAFNLLEQGEAWAIPSAFSSVVVPREKDKAPIKMNVPKEGIFVGPAGIAMVK
                     NGPAPELARALTNELLAADVQAKLQPETYAFPSNVDAPPPPGIPADTKVHSLDWQFVA
                     KERDGWVKRWDREMAI"
     gene            2586..3548
                     /locus_tag="VF991_21405"
     CDS             2586..3548
                     /locus_tag="VF991_21405"
                     /inference="COORDINATES: protein motif:HMM:NF025587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HEX9559065.1"
                     /translation="MTDRVTIPVLDLALDDRVLATRLDAAFRDIGFVALVDHGVPPAV
                     TDALYAAANAFFDLPLAAKRQVARPRPDQNRGYIGRGDETLARLAGQQTPPDHKEIFS
                     IGPFDLPDEPYYTAPAAYPSFAPNLWPQAPAALQPAMRAYWHEVTALARRVLGIAALA
                     LGLPADYFAATTDRHISMLRLICYPPYAGTPEDGQLRAGVHTDLNMLTLVHANSDTGG
                     LEVRARDGSWIAPSASGDAYVVNVGDILMRWTNDRWVSTPHRVANPPSGWSERRLSIP
                     FFFQANYDTIVECLPPCLAAGERPKYPPVSVGAYRAERYARTAG"
     gene            complement(3617..4207)
                     /locus_tag="VF991_21410"
     CDS             complement(3617..4207)
                     /locus_tag="VF991_21410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX9559066.1"
                     /translation="MDEADDVMFSPAVKAEQTRLGSRSMFEGRDFKSEITDDLRQFLA
                     VVDTFFFATASADGRPYVQHRGGPPGFLKPIGTHMLAFADFAGNRQYITLGHLKENDR
                     VHIFIPHFATQQRVKLWGRARVVEGDLALMERLVDPAYKARPERAVVFTLEAWDANCP
                     QHIVPRYSEAEIAPAIDKLAQRIKELEEEVERLKRS"
     gene            complement(4210..>4914)
                     /locus_tag="VF991_21415"
     CDS             complement(4210..>4914)
                     /locus_tag="VF991_21415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9559067.1"
                     /translation="SLDLLMGVDRQKETLLENTRRFAKGRPANNALLWGSRGAGKSSI
                     VKAVHAHVNREMGGPPGPLALVEIHREDIPSLPALLGMIRHSERRFLVFCDDLSFDGQ
                     DAAYKSLKAVLEGGIEGRPDNVVFYATSNRRHLMPRDMIENERSTAISPSEAVEEKVS
                     LSDRFGLWLGFHNADQDTFFAMIEGYAAHYKLGVPVETLRKQAVEWSVTRGARSGRVA
                     WQFIQEVAGQLGKTLE"
BASE COUNT          764 a         1671 c         1667 g          812 t
ORIGIN      
        1 acgatctgcc aggcgaaggc cttgaccacg acgccgatgg agagcggcag gatgatggcg
       61 accagcatcg cgatctgcag cgcggcgccg gcgcgggcca gcgcgaacga ggccgggtag
      121 ccgacggcga ggcagaccac cgtcacccac gccgcgacgc tgagcgtatt gccgacgacg
      181 cgccaattga acgggtcgga gaagaaatcg acgtacggac caagcgtcgg gccagccggt
      241 ccgacgaagc ttttcgccag cagccacaca agcggcatcg cgtacagggc caggagatag
      301 agaaccgccg gcgccgcgag cagggcgacc ggatcgcgcc acggcgaggc agcggccgat
      361 ggggccaggc gcgcgctcat ggcgccggat agaccaacgt gtcggcgacg gcccagccga
      421 gcgtcagcca ggtgccggac gacggtgcgc cgccggcgag atcggccgtc tcgaccatga
      481 gctggtcgcc cgggcgcgcg tcgaaatgga gctggacctt ggagccctgg aacaccgcat
      541 cgcgcaccgt cgcggtcgcg ctgttctcgg cggactcgcc gaccttgatg cgctcgggcc
      601 gcaccgccag gagcacgtcg gcgccgatca cgaagcggcc gcgtccgcgc agacggccga
      661 gcgcggtatc gaccgcgacg gtgccgtcca tgctcaccgc gaccttgccg gcaagccggg
      721 tcgaaagtcc gacgaattcc agcacgaacg ccgtctcggg ctgccggtag atcgcctcgg
      781 gtgcggcgaa ctgctcgatc gcgccgcggt tcatcaccgc gatgcggtcc gacatggtga
      841 gcgcctcgtc ctggtcgtgc gtcacgaaca ccgacgtcgt gccgagctcg cgcagcaggc
      901 gcctgagctc gatctgcatg gtctcgcgca gcttgcggtc gagcgccgaa aacggttcgt
      961 ccagcagcag aagcttgggt cgcaccgcga gcgcgcgggc caccgccacg cgctgctgct
     1021 ggccacccga caggacgcgc acggagcggt cggcgaactc ggtgagatgg acgaggtcga
     1081 ggaagcgccg cacagtctcg cgcgtgtcgg cggtgctgcg ccgtcgcgct cggaggccga
     1141 aggcgacgtt ctcggccacg ctgaggtgag ggaacagggc gtagttctgg aacaccacgc
     1201 cgacatcgcg cttgtgcggc ggcttggccg tgatgttctc gccgtcgagc cggacggtgc
     1261 cgcggtcggc cgccagaagg ccggcgacga tgcgcagcaa ggtggtcttg ccgcagcccg
     1321 atggccccag cagcgagacg aattcgccgg cgtcaacgcc gagatcgacg ccgcccagca
     1381 cggtggcggc gccgaacgac ttctccgcct ggctgacctc gagaaacgac cgggtctcca
     1441 cgcccgccct tagatggcca tttcgcgatc ccagcgtttg acccagccgt cgcgttcctt
     1501 ggcgacgaac tgccaatcga ggctgtgcac cttggtgtcg gcgggaatgc ccggcggcgg
     1561 cggcgcatcg acgttggacg ggaaggcgta ggtctcgggc tgcagcttgg cctgcacgtc
     1621 cgccgccagc agctcgttgg tgagcgcacg cgccagctcc ggcgcggggc cgttcttgac
     1681 catggcgatg cccgctggcc cgacgaagat gccttccttc ggcacgttca tcttgatcgg
     1741 cgccttgtcc ttctcgcgcg gcaccacgac ggaggagaag gcgctgggga tcgcccacgc
     1801 ctcgccctgc tccaggagat tgaaggcctg cgggatctgc gtgtagatcg tgaggatgtt
     1861 gggcttcagc gtcttgatct tcttgaagcc tgcgtcgata tcgaactggg cgtcggcgat
     1921 cggcttgccg gtctccaggt gcgcggccat caccaggttg gccaggccct cggtgttctg
     1981 cagcgagggc agcaccaggc ggcccttgta cttggcatcg tagagctcgg cccaggtcgc
     2041 gacgccggcc gggacggcct tggtgttggt ggcgacgccc tgccagggct gcaggtagtt
     2101 ggcccacatg ccgtccatgt ggatggcgtt cggacgcgtc ttggcgaggt tggggatggc
     2161 cgccggcgtc agcttttcca ggagcccctc ctggaccgcc aggatcatca ccggatcgtc
     2221 catcagcacg acgctgagat actgcttgtc cttgttcttc tgcatctttt cgaggttgac
     2281 cagcgagcgc gtgccctcga acgtcagctt gcacttgtat ttgtcctgga agaacgtggc
     2341 gaaggtgccg ttcatccacg acgccatgct ggccgcgccg ccgaccacga cttccttggc
     2401 ctgggcacgc acaatgttgg gaaagccgac catggtgagc ccggcggcac ccgtacccgc
     2461 cagaacgcga cgacgcgaca gcttgtttcg attgaccggc atggcgctgt tctccctcgg
     2521 caatttccct gaagcgggca gtgcaatcgt tgtgccaacc ctcgatcgat ggcatcgggc
     2581 ttgctatgac cgatcgcgtg acgatccccg tgctcgacct cgcgctcgac gaccgcgtgc
     2641 tggccacccg gctggatgcg gcgttccgcg acatcggctt cgtggcgctg gtcgatcacg
     2701 gcgtgccgcc ggcggtgacc gacgccttgt acgccgccgc caacgcgttc ttcgatctgc
     2761 cgcttgccgc caagcgtcag gtggcgcggc ctcggccgga ccagaaccgc ggctatatcg
     2821 gcaggggcga cgagacactc gcccggctgg ccggccaaca gacgcccccg gatcacaagg
     2881 agatcttctc gatcggcccg ttcgacctgc cggacgagcc ttactacacg gcgcccgccg
     2941 cctatccctc gttcgcgccc aacctgtggc cgcaagcccc ggcggccctg cagccggcga
     3001 tgcgggccta ctggcatgag gtcaccgcgt tggcgcgccg cgtgctcggc atcgccgccc
     3061 tggcgcttgg cttgccggcc gactacttcg cggcgacgac cgaccgccac atcagcatgc
     3121 tgcggctgat ctgctatccg ccctacgcgg gcacgccgga ggacggccag ctccgcgccg
     3181 gcgtccacac cgatctcaac atgctgacct tggtgcacgc caattcagac accggcgggc
     3241 tcgaggtgcg ggcgcgcgac ggctcgtgga tcgcgccgtc ggcctcgggc gacgcctatg
     3301 tcgtcaatgt cggcgacatc ctgatgcgct ggacgaacga tcgctgggtg tcgacgccgc
     3361 accgcgtcgc caatccgccg tccggctggt ccgaacggcg gctgtcgatc ccgttcttct
     3421 ttcaggccaa ctacgacacg atcgtcgagt gtctgccgcc ctgtcttgcg gccggcgaga
     3481 ggccgaagta tccgccggtc agcgtcggcg cctaccgcgc cgagcgctat gcgcgtacgg
     3541 ccggatagct catggtcttc tggaccgcgc gcgccgcgcg ctcttgaggc gcgcgagacg
     3601 cgcgcggtcc gaaagatcat gaacgtttga ggcgctcgac ttcctcttcc agctccttga
     3661 tgcgctgcgc gagcttgtcg atcgccgggg cgatctcggc ctcgctgtag cgcggcacga
     3721 tgtgctgagg gcaattggca tcccaggctt cgagggtgaa gaccaccgcc cgctcgggcc
     3781 ttgccttgta ggcggggtcg accaggcgct ccatcagcgc gagatcgccc tcgaccaccc
     3841 tcgcgcggcc ccacagcttc acgcgctgct gggtagcgaa atgcgggatg aagatgtgga
     3901 cgcggtcgtt ctccttgaga tgcccgagcg tgatgtactg gcggttgccg gcgaaatcgg
     3961 cgaaggccag catgtgcgtg ccgatcggtt ttagaaatcc cggtggcccg ccgcggtgct
     4021 gcacataggg ccggccgtcg gcgcttgccg tggcaaagaa gaaggtgtcg acgaccgcta
     4081 aaaactggcg caggtcgtcg gtgatctcgg acttgaagtc gcgcccctcg aacatcgagc
     4141 gcgaacccag acgtgtctgc tccgccttga ccgcgggcga gaacatcacg tcgtctgctt
     4201 cgtccatgcc tactccagtg tcttgccgag ctgtcccgcc acttcctgga tgaactgcca
     4261 ggcgacgcgg cccgagcgcg cgccgcgcgt caccgaccac tcgaccgcct gcttgcgcaa
     4321 ggtctcgacc ggcacgccga gcttatagtg ggccgcgtag ccctcgatca tggcgaagaa
     4381 cgtgtcctgg tcggcattgt ggaagccgag ccacaggccg aagcggtcgg acaacgacac
     4441 cttctcttcg accgcctccg acggactgat cgccgtcgag cgctcgttct cgatcatgtc
     4501 gcgcggcatc aggtggcggc ggttggaggt ggcatagaag acgacgttgt cgggccggcc
     4561 ctcgatgccg ccctcgagca cggccttcag cgacttgtag gctgcgtcct ggccgtcgaa
     4621 ggagaggtcg tcgcagaaca ccaggaagcg gcgctccgaa tggcggatca tcccgagcag
     4681 cgccggcagc gaggggatgt cctcgcgatg gatctcgacc agcgccagcg gtccgggcgg
     4741 cccgcccatc tcgcggttca cgtgggcgtg gacggccttc acgatcgagc tcttgccggc
     4801 gccgcgcgag ccccacagga gtgcattgtt ggccggccgg cccttggcga agcgccgcgt
     4861 gttctccagc agcgtctcct tctggcggtc gacgcccatc agcaggtcga ggct
//
LOCUS       DASWGA010000930         1649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1364008, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000930 DASWGA010000000
VERSION     DASWGA010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1364008"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..1020
                     /locus_tag="VF991_21420"
     CDS             1..1020
                     /locus_tag="VF991_21420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEX9559068.1"
                     /translation="MATVVSLDGKRKVPSLEPLLSLCADDMAQVDREILARMRSPVAL
                     IPELANHLVGAGGKRMRPLLTVAAARLCGYASAADRHIKLATCVEFIHSATLLHDDVV
                     DVSALRRGRPSANSVWGDKASVLVGDFLFTRAFELMVDVGSLDILAVMSRASSTIAEG
                     EVLQLTSQRDTSTPEATYLEVIKAKTAKLFAAATEVGAMVAGRNGPERVALESFGLNL
                     GIAFQLVDDALDYSGREAQLGKTVGDDFREGKITLPVILAFLRGRTVEREFWKRTIEK
                     LEQRTGDLEQAQTLIDRHGALADTLERARHYGAMARDALGLFPDTPLKAALLEAVDFA
                     IDRAH"
     gene            1035..>1649
                     /locus_tag="VF991_21425"
     CDS             1035..>1649
                     /locus_tag="VF991_21425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HEX9559069.1"
                     /translation="MAARHVLAIDQGTTSTRAIVFDAAGRPVASAQKELPQIFPKSGW
                     VEHDPEEIWSATLEVCRGALARAKLDAGALAGIGITNQRETTVVWDRATGKPIHNAIV
                     WQDRRTADRCEELRRAGHEGEVSARTGLILDPYFSGTKIAWILDHVAGSRAAAERGAL
                     AAGTIECFLLWRLTGGKVHASDATNACRSLLLDIHKGAWDSDLLK"
BASE COUNT          259 a          579 c          551 g          260 t
ORIGIN      
        1 atggccacgg tcgtctccct cgacggcaag cgcaaggtgc cgagcctgga gccgctgcta
       61 tcgctctgcg ccgacgacat ggcgcaggtc gaccgcgaga tcctggcgcg catgcgctcg
      121 ccggtggcct tgattcccga actcgccaac cacttggtcg gcgccggcgg caagcgcatg
      181 cggccgctgc tcacggtcgc ggcggcgcgg ctgtgcggct atgcctccgc cgccgatcgc
      241 catatcaagc tcgcgacctg cgtcgaattc atccattccg ccacgctgct gcatgacgac
      301 gtggtcgatg tcagcgcgct ccgccgcggc aggccgtcgg ccaattcggt gtggggcgac
      361 aaggcctcgg tgctggtcgg cgacttcctg ttcacgcgcg ctttcgaatt gatggtcgat
      421 gtcggctcgc tcgatatcct ggccgtgatg tcgcgcgcct cctcgaccat cgccgagggc
      481 gaggtgctgc agctcaccag ccagcgcgat accagcacgc cggaggcgac ctatctcgag
      541 gtaatcaagg ccaagaccgc caaattgttc gcagcggcca ccgaagtcgg cgccatggtc
      601 gccgggcgca acggtccgga gagggtggcg ctggagagtt ttggcctcaa cctcggcatc
      661 gccttccagc tcgtcgacga cgccctggac tactcgggcc gcgaggctca gctcggcaag
      721 acggtgggcg acgatttccg cgagggcaag atcaccctgc cggtgatcct ggccttcctg
      781 cgcggccgca ctgtcgaacg tgagttctgg aagcgcacta tcgagaagct cgagcagcgc
      841 acgggcgatc tcgagcaggc gcagaccttg atcgaccgtc atggcgcgct cgccgacacg
      901 ctggagcgcg cgcgtcacta tggcgccatg gcgcgcgatg cgcttggcct cttccccgac
      961 acgccgctca aggccgcgct cctcgaagcg gtcgatttcg ccatcgaccg cgcgcactga
     1021 gccgccggca cgcgatggct gccaggcacg ttctcgccat cgaccagggc acgaccagca
     1081 cgcgcgccat cgtgttcgac gccgcgggtc ggccggtcgc atcggcgcag aaggagctgc
     1141 cgcagatctt tcccaaatcc ggctgggtcg agcacgatcc cgaggagatc tggtcggcca
     1201 cgctcgaggt ctgccgcggg gcgctggccc gggcgaagct cgatgccggg gcgctggccg
     1261 gcatcggcat caccaaccaa cgcgagacca cggtcgtgtg ggaccgcgcc accggcaagc
     1321 cgattcacaa cgccatcgtc tggcaggatc gccgcaccgc cgaccgctgc gaggagctgc
     1381 ggcgggccgg gcatgagggc gaggtctcgg cccgcaccgg cctgatcctc gatccgtatt
     1441 tttccggcac caagatcgcc tggatcctcg atcacgtggc tggcagccgg gccgcggcgg
     1501 aaagaggcgc gctcgccgcc ggcaccatcg aatgcttcct gctgtggcgg ctgacgggcg
     1561 gcaaggtgca tgccagcgac gccaccaatg cctgccgcag cctgctgctc gacatccaca
     1621 agggcgcgtg ggactccgat ctcctgaag
//
LOCUS       DASWGA010000931         2753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_109672, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000931 DASWGA010000000
VERSION     DASWGA010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109672"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..884
                     /gene="gcvT"
                     /locus_tag="VF991_21430"
     CDS             <1..884
                     /gene="gcvT"
                     /locus_tag="VF991_21430"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEX9559070.1"
                     /translation="VPGDIAGLQPGQQRYTQFTNDQGGITDDLMVTSTGDHLLLVINA
                     ACKDADLAHLQKHLSAVCEVEPMFSRGLLALQGPQAAPALARLAPQVASMKFMTGAFV
                     VIDGARCYVTRSGYTGGDGYEISTPADATEAIARRLLAQPEVKPIGLGARDSLRLEAG
                     LCLYGHDIDTTTTPIEAGLLWSIGKERRVHGGFPGAAVIQKQIAEGAPRKRVGLLPEG
                     KAIAREGAEIAIAGQTEGTVTSGGFAPTLGRAIAMGYVARAQSANATKVDLFVRGKPV
                     PAEIVPMPFVKHAYYRG"
     gene            894..1271
                     /gene="gcvH"
                     /locus_tag="VF991_21435"
     CDS             894..1271
                     /gene="gcvH"
                     /locus_tag="VF991_21435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEX9559071.1"
                     /translation="MASVKYSQEHEWIRVEGDVGTIGISQYAQEQLGDVVFVEVPQAG
                     RKVAKGEACAVVESVKAASDIYAPVSGEVVEANAALADAPGDVNAEPMGKGWFFKLRL
                     ADKGELDGLMDEAAYGAFVKSLG"
     gene            1284..2630
                     /gene="gcvPA"
                     /locus_tag="VF991_21440"
     CDS             1284..2630
                     /gene="gcvPA"
                     /locus_tag="VF991_21440"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HEX9559072.1"
                     /translation="MRYLPLTEADRRDMLAVIGAKSVDELFKDVPQSARLPAKIAGLP
                     DHQGELEVERAFQAYAAKNLSPSSAPFFIGAGAYRHHVPSAVDYLIQRGEFLTSYTPY
                     QPEITQGTLQYLFEFQTQVTLLTGMEVANASMYDGSTGASEAVLMANRITRRHKALTS
                     GGLHPQYRRVIETAARWEGFGAVAGTADPDGLEDLIAQVDKETSCVVVQNPSFFGHVR
                     DFSQLAAACHAAGALLIVVVTEVVSLGLIKPPGEMGADIVVCEGQSIGNGLGFGGPYV
                     GLFATRDKYVRQMPGRLVGETVDADGKRGFVLTLSTREQHIRREKATSNICTNAGLCA
                     LAFTVHLTLLGEAGFRRLAELNHAKASELADRVSSLPGVKLLNDSFFNEFTVRLPKRA
                     APVVEALAAKRLLAGVPVSRLIPHESSVENLLLLAATETTTEHGMAPLIAGLKEVL"
BASE COUNT          455 a          949 c          914 g          435 t
ORIGIN      
        1 tggtgccggg cgatatcgcg ggcctgcagc ccggacagca gcgctacacc cagttcacca
       61 acgaccaagg cggtataaca gacgatctga tggtgaccag caccggcgat catctcctgc
      121 tggtgatcaa cgccgcctgc aaggacgccg atcttgcgca cctccagaag catctctcgg
      181 ccgtctgcga ggtcgagccg atgttctccc gcggcctgct cgctctgcag ggaccgcagg
      241 cggcgccggc tttggcgcga ctggccccgc aggtcgcgtc gatgaagttc atgaccggcg
      301 ccttcgtcgt gatcgacggc gcgcgctgct acgtcacgcg ctcgggctac accggcggcg
      361 acggctacga gatctcgaca ccggccgatg ccacggaagc catcgcccgc aggcttctgg
      421 cccagcccga ggtcaagccg atcgggctcg gcgcacgcga ttcgctgcgc ctggaggcgg
      481 gcctctgcct ctacggccac gacatcgata ccaccacgac gcccatcgag gccggcctgt
      541 tgtggagcat cggcaaggag cgccgcgtcc acggcggctt tcccggcgcc gccgtcatcc
      601 agaagcagat cgccgaaggg gcgccgcgca agcgggtcgg ccttctgccc gagggcaagg
      661 cgatcgcccg cgagggcgcg gagatcgcga ttgccggcca gaccgagggc acggtgacgt
      721 cgggtggctt cgctcccacg ctcgggcgcg ccatcgccat gggctatgtc gcgcgcgccc
      781 agtccgccaa cgccaccaag gtcgacctct tcgtgcgcgg caaaccggtg ccggccgaga
      841 tcgtgcccat gcccttcgtc aaacatgcct actaccgcgg ttaggagttt tggatggcca
      901 gtgtcaaata cagccaagag cacgaatgga tccgcgtcga aggcgacgtc ggcacgatcg
      961 gcatcagcca atatgcccag gagcagctgg gcgacgtggt cttcgtcgag gtgccgcagg
     1021 ccggccgcaa ggtcgccaag ggcgaggcct gcgcggtcgt cgaatcggtg aaggccgcct
     1081 ccgacatcta cgcgccggtg tcgggcgaag tggtcgaagc caatgccgcc ctggccgatg
     1141 cgccgggcga cgtcaatgcg gagccgatgg gcaagggctg gttcttcaag cttcggcttg
     1201 ccgacaaggg cgagctcgac gggctgatgg acgaagcggc ctacggcgcc ttcgttaaaa
     1261 gcctgggctg agcgaggccg atcatgcgct atctccccct caccgaggcc gaccgccgcg
     1321 acatgctggc ggtgatcggc gccaagtcgg tcgacgagct gttcaaggat gtgcctcagt
     1381 cggcgcgatt gcccgccaag atcgcgggcc tgcccgacca ccagggcgag ctcgaggtcg
     1441 aacgcgcctt ccaggcctat gcggcgaaga acctgtcgcc gtcgtcggcg ccgttcttca
     1501 tcggcgccgg cgcttatcgc caccacgtgc cctcggccgt cgactacttg atccagcgcg
     1561 gcgagttttt gacgtcctac acgccctacc agccggagat cacgcaaggc acgctgcaat
     1621 acctgttcga gttccagacc caggtgacct tgctgaccgg catggaggtg gccaacgcct
     1681 cgatgtacga cggctcgacc ggagcgtcgg aggccgtgct gatggccaac cgcatcacgc
     1741 gccgccacaa ggcgctgacc tcgggcgggc tgcatccgca gtatcgccgc gtcatcgaga
     1801 cggcggcccg ctgggaaggt tttggcgccg tcgccggcac ggccgatccg gacgggctgg
     1861 aagacctgat cgcccaggtc gacaaggaga cgtcctgcgt cgtcgtgcag aacccgagct
     1921 tcttcggcca tgtgcgcgac ttcagccaac tcgccgcagc ctgccatgca gcgggcgcgc
     1981 tgctgatcgt ggtggtgacc gaggtcgtct cgctcggcct catcaagccg ccgggcgaga
     2041 tgggcgccga catcgtggtc tgcgaaggcc agtcgatcgg caacgggctg ggcttcggcg
     2101 gcccctatgt cggcctgttc gcgacccgcg acaagtacgt gcgccagatg ccgggccggc
     2161 tggtcggcga aaccgtcgat gccgacggca aacgcggttt cgtgctgaca ctcagcacgc
     2221 gcgagcagca tatccgccgc gagaaggcga cctccaacat ctgcaccaat gccggcctgt
     2281 gtgcgcttgc cttcaccgtg catctcactc tgctgggcga ggcagggttc aggcgcctgg
     2341 ccgaactcaa ccacgccaag gccagcgagc tcgccgaccg cgtctcttcg ctgccgggcg
     2401 tgaagctgct gaacgacagc ttcttcaatg aattcaccgt gcgcctgccc aagcgcgcgg
     2461 cgccggtggt cgaggcgctg gccgccaagc gcctcctggc aggcgtgccg gtctcgcgcc
     2521 tgatcccgca tgagtcctcg gtcgaaaacc tgctgctgct ggccgcgacc gaaaccacga
     2581 ccgagcacgg catggctccg ctgatcgccg gcctgaaaga ggtgctgtga tggtccagtc
     2641 gctcgaccgt tcgcagggcc gtgctggcgg aatcgtcgcc gacgcgccgg ccgccgctac
     2701 cttcaccggc aaccgcgcgc tgcagatcga ggaaccgctg atcttcgaga tgg
//
LOCUS       DASWGA010000932         4020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2249943, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000932 DASWGA010000000
VERSION     DASWGA010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4020
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2249943"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1528)
                     /locus_tag="VF991_21445"
     CDS             complement(<1..1528)
                     /locus_tag="VF991_21445"
                     /inference="COORDINATES: protein motif:HMM:NF045284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559073.1"
                     /translation="MAIALAPRVYGLDAICAAALQTGGGDEAASFARRLFGRVADKDL
                     AAAPADQRAAAAIALLAFARRRLPGVAKVRVFNPSAQDHGFESRHTIVQIVNDDMPFL
                     VDSITNEFDRREIAVHLLAHPVLAARRDLDGDLSGFAPEASERARPESMMHIEIDRQA
                     DPVLLDELAAALTRVLAEVRLAVEDWRPMRRAGLDAIADLGPSRSPNLPEYEEFLRWL
                     EANHFTFLGHRRYRYVDDAAQPGGLRYDLMPGSALGILRRDEVRLFEAGLGGGEAMAR
                     FARGPHNIMIVKTDRPSLVHRIGPMDCVIVKTYDADSRVTGERRLVGLFTSAAYHALV
                     HDVPLLRGRVDNILRRSRLDANSHDGKALLAILDAYPRDELFQIEEDTLYDHVLGILQ
                     LQERRRVALFARRDAVGRFASCLVFAPRERFDAALSERFSAILERAWHAKVTSVASSI
                     SSDSALAQSLYTLKLEAPDSATPDLGELEHALADAATSWSDRFRAALQTSLGEVDGRA
                     A"
     gene            2227..>4020
                     /locus_tag="VF991_21450"
     CDS             2227..>4020
                     /locus_tag="VF991_21450"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF006577.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEX9559074.1"
                     /translation="MFDVVQVRSGARVVTDASRDSRLTVFGKATLSDRYLLPGESYQE
                     MFARVASAYADDDGHAQRLYDYISNLWFMPATPVLSNGGTKRGLPISCFLNEASDSLE
                     GIVGLWNENVWLAARGGGIGSYWGNLRSIGEKVGMNGKTSGVVPFIRVMDSLTLAISQ
                     GSLRRGSAAVYLPVNHPEIEEFIEIRRPTGGDPNRKALNLHHGLLVSDAFMRAVENDE
                     EWALVSPKDGAVQRKVSARHLWIRILTARIETGEPYLIFVDHVNNARPEHHKLAGLEV
                     KTSNLCSEITLPTGIDHHGKQRTAVCCLSSLNLESYLEWHEHPTFIEDVMRFLDNVLQ
                     GFIDDAGTDFARATYAAMRERSVGLGVMGFHSFLQQNNIPLESVMAKVWNKKMFKHVR
                     GQCDAASKALAKERGACPDAADFGVEERFSNKLAIAPTASISIICGGASPGIEPSAAN
                     VYNHKTLSGSFVVHNPYLEKVLTQKGKNDEDTWTSITISQGSVQHLDCLDDHEKAVFK
                     TAFEIDQRWLVEHAADRAPYICQSQSLNIFLPADVHKRDLHQIHMMAWKRGVKSLYYC
                     RSLSIQRAESVAGEALTAAPLGDQNLSAPRLD"
BASE COUNT          705 a         1295 c         1330 g          690 t
ORIGIN      
        1 cggcggcgcg gccgtcgact tcgccgaggc tggtttgcag cgcggcgcga aagcgatcgc
       61 tccacgaggt cgcggcgtcg gccagcgcgt gttcgagttc gccgagatcg ggcgtggctg
      121 agtccggcgc ctcgagcttc agggtgtaga gcgactgggc gagcgctgaa tcgctgctga
      181 tcgaggaggc gaccgatgtc accttggcat gccaggcccg ttcgaggatg gcgctgaagc
      241 gctcgctcag cgccgcatcg aagcgctcgc gtggcgcgaa caccaggcag ctggcaaagc
      301 ggccgaccgc gtcgcggcgg gcgaacaggg cgacgcgccg acgctcctgc agctgcagga
      361 tgcccaggac atggtcgtag agcgtgtcct cctcgatctg gaacagctcg tcgcgcggat
      421 aggcgtcgag gatcgccagc agcgccttgc cgtcgtggct gttggcgtcg aggcgggagc
      481 ggcgcaggat attgtcgacc cgcccgcgca gcagcggcac gtcgtgcacc agggcatgat
      541 aggcggccga cgtgaacagc ccgaccaggc gccgttcgcc ggtcaccctg ctgtcggcgt
      601 cgtaggtctt cacgatcacg caatccatcg gcccgatgcg atgcaccagc gacggccggt
      661 cggtcttgac gatcatgatg ttgtgcggcc cgcgggcgaa gcgggccatc gcctcgccgc
      721 cgcccaggcc cgcctcgaac aggcgcacct cgtcgcggcg caggatgccg agcgccgacc
      781 ccggcatcag gtcgtagcgc agcccgcccg gctgcgccgc atcgtcgacg tagcggtagc
      841 ggcgatggcc gaggaaggtg aaatggttgg cttccagcca gcgcaggaat tcctcgtact
      901 ccgggaggtt gggcgagcgg ctggggccga ggtcggcgat ggcgtcgagg ccggcgcgcc
      961 gcatcggccg ccagtcctcg accgcgaggc gtacctcggc cagcacgcgg gtgagcgccg
     1021 cggcaagctc gtcgagcagg acgggatcgg cctggcggtc gatctcgata tgcatcatcg
     1081 attcaggccg cgcccgctcg ctggcctcgg gcgcgaagcc cgaaaggtcg ccgtcgaggt
     1141 cgcgccgcgc cgccagcacg ggatgggcca gcagatgcac ggcgatctcg cggcgatcga
     1201 actcgttggt gatcgagtcg accaggaacg gcatgtcgtc gttgacgatc tgcacgatgg
     1261 tgtgacggct ttcgaagccg tggtcctggg ccgagggatt gaacacccgg accttggcga
     1321 cgccgggcag ccggcggcgg gcgaaggcga gcagcgcgat tgccgcggcg gcacgctggt
     1381 cggcgggggc cgccgccaag tccttgtcgg cgacgcggcc gaacagacgg cgggcgaacg
     1441 aggctgcctc atcgccgccg ccggtctgca gggcggcggc gcagatggcg tccagaccgt
     1501 agacacgcgg cgccagtgcg atggccatgt tcctcggttc cttcccgttg acggccggta
     1561 gggtttccgg cgtttccggc gtttccggta gtcattttcg atgaggtgct tggcgtgcac
     1621 ccccggttga gacagtaaaa ctccggctac ggcgctcaaa tccgaaagat gtgacgttgg
     1681 cgcgttgtca cggcggggaa gttaagtgat atttttcaga aagtccagtt tttcttcgag
     1741 aataatcatc tcgccggcgc cgcaaacgga ataagtgcgc accattcggg gggtaaagct
     1801 gttgcgatgt gtcggcgggc aggccgccgg cgcaacggcc gaaagtcggc gacgcgggaa
     1861 gtgcccatcg cttcgggcat tttgaccggt gcgtccccgc gggtctgccg aatggctgga
     1921 gtttctgtcg agggtccttg gattccgcgg caaagcgcgc tttgttctgg ttccatgctg
     1981 caattgcgaa ggtccgacta cgcttcgcaa catgaatcgc ctaaaggaaa tttattgctg
     2041 cttttcaagc ggttaggcct catttcctga gattcacaac caaggtagaa atttggcgat
     2101 gacatgtctt ttgggagacg tatcatcaat ggctagtggg atggctgagc cactccccaa
     2161 gatgtaggtg tcttccacag agtgttttat ccactgctgt ggacaaaaag ataatggggg
     2221 ccgcaagtgt ttgatgttgt tcaagttcga agcggtgcgc gcgttgttac tgacgcctct
     2281 cgggactccc gcctgacggt ctttggcaag gccaccctgt ccgaccgcta cctcctgccc
     2341 ggcgagagtt accaggagat gttcgcccgg gtcgcctcgg cctatgccga cgacgacggc
     2401 catgcccagc ggctctacga ctacatcagc aatctgtggt tcatgccggc cacgccggtg
     2461 ctcagcaacg gcgggaccaa acgcggcctg ccgatctcgt gcttcctgaa cgaggccagc
     2521 gattcgctcg aaggcattgt cggcctgtgg aacgagaacg tctggctggc ggcgcgcggc
     2581 ggcggcatcg gctcctactg gggcaacctg cgctcgatcg gcgaaaaagt cggcatgaac
     2641 ggcaagacgt cgggcgtggt gccgttcatc cgggtgatgg actcgctgac gctggccatc
     2701 agccagggct cgctgcgccg cggctcggcc gcggtctacc tgccggtcaa ccatcccgag
     2761 atcgaggaat tcatcgaaat ccgccggccg accggcggcg accccaatcg caaggcgctc
     2821 aacctgcatc acggtctgct ggtctccgac gccttcatgc gcgccgtcga gaacgacgag
     2881 gagtgggcgc tggtcagccc caaggacggc gccgtgcagc gcaaggtctc agcgcggcat
     2941 ctgtggatcc gcatcctgac ggcgcgcatc gagaccggcg agccttacct gatcttcgtc
     3001 gatcacgtga acaacgcccg gcccgagcac cacaagctgg ccggcctcga ggtcaagacc
     3061 tcgaacctgt gcagcgagat cacgctgccc accggcatcg accatcacgg caagcagcgc
     3121 accgcggtgt gctgcctcag ctcgctcaat ctggaatcct atctcgagtg gcacgagcat
     3181 ccgaccttca tcgaggacgt gatgcgcttc ctcgacaacg tgctgcaggg cttcatcgac
     3241 gacgccggca cggacttcgc ccgcgccacc tacgccgcca tgcgcgagcg ttcggtcggg
     3301 ctgggcgtca tgggcttcca ctccttcctg cagcagaaca acatcccgct cgaatcggtg
     3361 atggccaagg tgtggaacaa gaagatgttc aagcacgtcc gtggccagtg cgacgcggcg
     3421 tcgaaggcgc tcgccaagga gcgcggcgcc tgcccggacg ccgccgattt cggcgtcgag
     3481 gagcgtttct ccaacaagct cgcgatcgcg ccgaccgcct cgatctcgat catctgcggc
     3541 ggcgcctcgc ccggcatcga accctcggcg gccaatgtct acaatcacaa gaccctgtcg
     3601 ggctcgttcg tggtgcacaa cccgtatctc gagaaggtgc tgacccagaa gggcaagaac
     3661 gacgaggaca cctggacgtc gatcaccatc agccagggct cggtgcagca tctcgactgc
     3721 ctcgacgacc acgagaaggc ggtgttcaag accgccttcg aaatcgacca gcgctggctg
     3781 gtcgagcatg ccgccgaccg cgcgccctac atctgccaga gccagtcgct caacatcttc
     3841 ctgccggccg acgtccacaa gcgcgacctg caccagatcc acatgatggc ctggaagcgc
     3901 ggcgtgaaga gcctctatta ctgccgctcg ctttccatcc agcgcgccga atcggttgcc
     3961 ggcgaggcgc tcaccgcagc accactcggc gatcaaaacc tttcagcccc cagactcgac
//
LOCUS       DASWGA010000933         2706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2133105, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000933 DASWGA010000000
VERSION     DASWGA010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2133105"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VF991_21455"
     CDS             complement(<1..437)
                     /locus_tag="VF991_21455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9559075.1"
                     /translation="MAALLEVKGLKAFYGQTQSLYDVGFDIPAGGITTLLGANGAGKT
                     TTLRAICNMVRTEGVVRFDGKDLGGMATEEIVRLRIAHVPEGRGTFTTLTVDENLRIA
                     AYTRSDKAGVQADLDRVFTYFPRLKERVQQQAGTLSGGEQQMLA"
     gene            complement(437..1225)
                     /locus_tag="VF991_21460"
     CDS             complement(437..1225)
                     /locus_tag="VF991_21460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9559076.1"
                     /translation="MAGPSSSSSPPLLSVRDVSVRFGGIVALDGVTFDVVSGQIAGLI
                     GPNGAGKTTLFNCLSRLYTPNGGDILFEGASILGRQRYNIPQIGIGRTFQNVALFDRM
                     SVLDNVKVGCHSRSSTSFFDNALRLAKVAPEEAHISERAHELIAFMDLVPFTNAIAGG
                     LPFPIRKRVELARALASSPKLLLLDEPAAGLNHEEIDVLKGQIRRVRDMQHVTVLLVE
                     HHMSLVMSVSDKVVAIDFGKKIADGTPSEVQRDPEVIRAYLGTS"
     gene            1662..2624
                     /locus_tag="VF991_21465"
     CDS             1662..2624
                     /locus_tag="VF991_21465"
                     /inference="COORDINATES: protein motif:HMM:NF024600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559077.1"
                     /translation="MPAAPGAPQGQPATGTPGPVPLPHWFAEIDTDKKGEVTRAEFLK
                     YRMKSFDELDANKDGKLSLEEFLKIAEPPFSGDVPGGPTLEERRNRAKAEFQNLDTNR
                     DGLIERAEAEAVVHSEFNQYDTDRDNKVTEPELRLIIQRSLAREAAERQQIEQRRRQG
                     MLTISDFIDMQLREADKLDKNNDGKVSQQEYVVLAGPADGEQAKNLLPYDIRRQLVMR
                     KFQEIDTNKDGQLDRVEYTGYAVKQFIEMDTNKDRFLTEEEFKKAQEAETKKMRAIIQ
                     AMQPAQPAQPRPAPAPAPPRGTVQPQPGPAAPQGLAPGLPQGTR"
BASE COUNT          487 a          941 c          875 g          403 t
ORIGIN      
        1 gccagcattt gctgctcgcc gcccgacagc gtcccggcct gctgctgcac gcgctccttg
       61 agccgcggaa aataggtgaa gacgcggtcg aggtcggcct ggacgcccgc cttgtcactg
      121 cgcgtgtagg cggcgatgcg caggttttcg tcgaccgtca gcgtcgtgaa ggtgccgcgg
      181 ccctcgggca cgtgggcgat ccgcagacgc acgatctcct cggtcgccat gccgcccagg
      241 tccttgccgt cgaagcggac cacgccttcg gtgcgcacca tgttgcagat cgccctgagc
      301 gtcgtcgtct tgccggcgcc gttggcgccc agcagggtgg tgatgccgcc ggccgggata
      361 tcgaagccga cgtcgtagag cgactgcgtc tggccgtaga acgccttcag ccctttcact
      421 tcgagcagcg cggccatcac gaggtcccca ggtaggcgcg gatcacctcg ggatcgcgtt
      481 gcacttcgga cggggtgccg tcggcgatct tcttgccgaa gtcgatggcg acgaccttgt
      541 ccgacaccga catgacgagg ctcatgtgat gctcgaccag cagcacggtg acgtgctgca
      601 tgtcgcgcac ccgtctgatc tggcccttca ggacgtcgat ctcctcgtga ttgaggccgg
      661 ccgccggctc gtcaagcagc agcagcttgg ggctcgaggc gagcgcgcgc gcgagttcga
      721 cccgcttgcg gatggggaac ggcaggccgc cggcgatcgc gttggtgaac ggcacgaggt
      781 ccatgaaggc gatcagctcg tgcgcgcgct ccgagatgtg cgcctcttcc ggggcgacct
      841 tggccaggcg cagcgcgttg tcgaagaagc tggtcgagct gcggctgtgg cagccgacct
      901 tgacgttgtc gagcaccgac atgcgatcga acagcgccac gttctggaag gtgcggccga
      961 tgccgatctg cgggatgttg tagcgctggc ggccgaggat cgacgcgccc tcgaacagga
     1021 tgtcgccgcc gttgggcgtg tagagccggc tgagacagtt gaagagggtg gtcttgccgg
     1081 cgccgttggg accgatcagg cccgcgatct ggccggagac gacgtcgaaa gtcacgccat
     1141 cgagcgccac gatgccgccg aaacggaccg agacatcgcg cacactgagc agcggtgggc
     1201 tgctggatga ggacggtcct gccatgttca cgctggtttc gttggccggc ccattcaacg
     1261 cgccggcacc gcgaaattac ccttgcctcc caagtacttg cgacccttct ccggagtctg
     1321 caccccggtc acgatggcct atccgactgg gcgacgcaac tcaaatggcg ccgcgcgcca
     1381 tgctttgggc gcgattgcgc cgcaggattg atccgcaccg cggacgttga cacgccaagc
     1441 attgccgccg atacgaagcg acctctctca atgcgggttc accgccgatg aagcgcctac
     1501 tcagtccaat tctcttcact gcactcgtcc tcactctgcc ggccgccgcg caaaccccac
     1561 cgacccaagg ttggccggcc aaccgtccgc ccgatccctc cgcccctcaa gccaagccgc
     1621 cgcagccgtc cgcacccgcc gctccaggcg ggcaggcctc cgtgccggcc gctcccggcg
     1681 cgccgcaagg ccaaccggcg accggcacgc ccgggccggt gccgctgccg cactggttcg
     1741 ccgagatcga taccgacaag aaaggcgagg tcacccgcgc ggagttcttg aagtaccgca
     1801 tgaaatcgtt cgatgagctc gacgccaaca aggacggcaa gctgtcgctc gaggaattcc
     1861 tcaagatcgc cgagccgccg ttctcgggcg acgtgccggg cgggccgacg ctcgaggaac
     1921 gccgcaaccg ggccaaggcg gagttccaga atctcgacac caaccgcgac ggcctcatcg
     1981 agcgcgccga ggccgaggcc gtggtccact ccgaattcaa tcagtacgac acggaccgcg
     2041 acaacaaggt gaccgaaccc gagttgcgcc tgatcatcca gcgctcgctg gcgcgcgagg
     2101 ccgccgagcg ccagcagatc gagcagcgcc gccgccaggg catgctgaca atcagcgact
     2161 tcatcgacat gcagctgcgc gaggccgaca agctcgacaa gaacaacgac ggcaaggtga
     2221 gccagcagga atatgtcgtg ctggcggggc cggcggacgg cgagcaggcc aagaacctgc
     2281 tgccctacga catccgccgc cagctcgtca tgcgcaaatt ccaggaaatc gacaccaaca
     2341 aggacggcca gctcgatcgc gtcgagtaca ccggctatgc ggtcaagcag ttcatcgaaa
     2401 tggataccaa caaggaccgc ttcctcaccg aggaggagtt caagaaggcg caggaagccg
     2461 aaaccaagaa gatgcgcgcc atcatccagg cgatgcagcc ggcgcaaccc gcccagcccc
     2521 gcccggcgcc cgcgccggcc ccgccgcgcg gcactgtcca gccgcaaccc gggccggccg
     2581 cgccgcaagg cctggcgccc ggcctgccgc aaggcacgcg ttagcagggc gcgcgactcc
     2641 agtcgcgcat ctttgccggc accacaggaa gaccgcgcct ctggagtggc gcgcccccag
     2701 cgctat
//
LOCUS       DASWGA010000934         2098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1882305, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000934 DASWGA010000000
VERSION     DASWGA010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1882305"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VF991_21470"
     CDS             complement(<1..508)
                     /locus_tag="VF991_21470"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HEX9559078.1"
                     /translation="MPGFLLAAVALAGSPGPATLSLTATGAAFGARRGAAYLAGIVVG
                     MMAVMAIVASGLVGLLLAVPGATPVVTVLAAAYFLYLAWRIATAPPLSEAAGQRRAPT
                     FTGGLLLSLANPKGYAAMAALYSGFVLVHDRRALDVAAKMVVLVLIITAVNVAWLFAG
                     AAMTRLFRR"
     gene            complement(566..844)
                     /locus_tag="VF991_21475"
     CDS             complement(566..844)
                     /locus_tag="VF991_21475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559079.1"
                     /translation="MKHATAPALDRLEPLLAKLRRHSGLKEKSRGVFYVKARPTLHFH
                     EDPKGLFADFRSTGDQWQRFAVNTADEQTAFLRVVAAYLARTTPGRLY"
     gene            complement(841..1749)
                     /locus_tag="VF991_21480"
     CDS             complement(841..1749)
                     /locus_tag="VF991_21480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007565903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HEX9559080.1"
                     /translation="MNYPKKVRLVEVGPRDGLQNEAKPVPVEAKVALIDALTAAGHSA
                     VEAGSFVSPKWVPQMANTDEVMARIQRKPGVGYPVLVPNKQGMNGAIEAKCEEIAVFT
                     AASEAFCRKNTNCSIDESFERFAPVMEAAHKHGMKVRGYVSTVIACPYDGKVAPAKVA
                     EVSERLFKMGCYEVSLGDTIGVGTPADCVAMVDAVAAGVPREKLAAHFHDTYGQSLAN
                     IMAVMERGIAVFDTAVAGLGGCPYAKGASGNVGTEDVIYLLNGLGIEHGVDLDAIAKA
                     GRAICTALGREPASKVAQALKAKVAA"
     gene            complement(1761..>2098)
                     /locus_tag="VF991_21485"
     CDS             complement(1761..>2098)
                     /locus_tag="VF991_21485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559081.1"
                     /translation="KPAVSMDEARDARHCFCRMGPMRSYAKSIALYERTRKHLAGGVS
                     SNDEVIVTSFIAGKYDTVPKKMFNELILEVNPTITAVATLLIGLTVLALAAVTVILSR
                     AGKLKQTLV"
BASE COUNT          343 a          723 c          688 g          344 t
ORIGIN      
        1 gtcggcggaa caggcgcgtc atggcagcgc ccgcgaaaag ccaggcgacg ttgaccgccg
       61 tgataatcag gaccaagacg accatcttgg cggcgacgtc gagcgcccgc cggtcgtgca
      121 ccagcacgaa gccggaatag agcgccgcca tcgcggcata gcccttggga ttggccagcg
      181 acagcagcag cccgcccgtg aaagtggggg cgcggcgctg tcccgcagcc tcgctgagcg
      241 gcggcgccgt ggcgatgcgc caggcgaggt agaggaaata agccgcggcc agcacggtca
      301 cgaccggcgt cgcgccgggc accgccagca gcaggccgac caggccgctg gcgacgatgg
      361 ccatcaccgc catcatgccg accacgatgc cggccagata ggcggcgccg cggcgcgcgc
      421 cgaaagcggc gccggtggcg gtgaggctca aggtcgccgg tcccggactg ccggccagcg
      481 cgaccgcggc gaggaggaac ccgggcaatg cttccaccgc gccgttgtgg cggtggacgc
      541 gctcaccgtc ttgaacgttc gtgcgtcagt agagtctgcc aggggtcgtc ctggccaggt
      601 acgcggcaac gacccgcagg aacgccgtct gctcgtcggc cgtgttcacc gcaaagcgct
      661 gccactgatc gccggttgat ctaaaatcgg caaacaagcc cttgggatcc tcgtggaaat
      721 gaagagtcgg cctcgccttg acgtagaaca cgccgcgcga cttctccttc agcccgctgt
      781 gccggcgcag cttcgccagc agcggttcca gccggtcgag cgccggggcc gttgcatgct
      841 tcacgccgcc accttcgctt tcagcgcctg cgccaccttc gacgcgggct cgcggccgag
      901 cgcggtgcag atcgcgcggc cggccttggc gatggcgtcg aggtcgaccc catgctcgat
      961 gccgagcccg ttcagcaggt agatcacgtc ctcggtgccg acattgcccg aagcgccctt
     1021 ggcgtagggg caaccgccca agccggcgac agcggtgtcg aacacggcga tgccgcgctc
     1081 catcaccgcc atgatgttgg ccagcgactg gccgtaggtg tcgtggaaat gcgccgccag
     1141 cttttcgcgc ggcaccccgg ccgcgacggc atcgaccatg gccacgcagt cggccggcgt
     1201 gccgacgccg atcgtgtcgc ccagcgagac ttcgtagcag cccatcttga acagccgctc
     1261 cgacacctcg gcgactttcg ccggcgccac cttgccgtcg taggggcagg cgatcacggt
     1321 ggaaacgtag ccgcggacct tcatgccgtg cttgtgcgcc gcttccatga ccggcgcaaa
     1381 acgctcgaag ctctcgtcga tcgaacagtt ggtgttcttg cggcagaacg cctccgaagc
     1441 ggcggtgaac accgcgatct cctcgcactt ggcctcgatg gcgccgttca tgccctgctt
     1501 gttggggacc agcacggggt agccgacgcc gggcttgcgc tggatgcggg ccatcacctc
     1561 gtcggtgttg gccatctgcg gcacccattt gggcgacacg aagctgccgg cctcgaccgc
     1621 cgaatggccg gccgccgtca gcgcatcgat cagcgccacc ttggcctcga cgggcaccgg
     1681 ctttgcctcg ttctgcaagc catcgcgcgg acccacttcg accagccgca ccttcttcgg
     1741 gtagttcatg gtttccgtcc ctacaccagc gtctgcttga gcttgccggc gcggctcagg
     1801 atgaccgtta cggccgccaa cgccaagacc gtcaagccga tgagcagggt tgcaactgcg
     1861 gtgatggtcg gatttacctc gaggatcagc tcgttgaaca tcttcttcgg cacggtgtcg
     1921 tacttgccgg cgatgaagga ggtgacgatc acctcgtcgt tgctgctgac gccgcctgcc
     1981 agatgcttcc tggtgcgttc gtagagtgcg atcgacttgg cgtagctgcg catggggccc
     2041 atccggcaaa aacaatgcct agcgtcccgc gcctcgtcca tactgacagc cggcttcg
//
LOCUS       DASWGA010000935         1517 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1248035, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000935 DASWGA010000000
VERSION     DASWGA010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248035"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(274..>1517)
                     /locus_tag="VF991_21490"
     CDS             complement(274..>1517)
                     /locus_tag="VF991_21490"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RecQ family ATP-dependent DNA helicase"
                     /protein_id="HEX9559082.1"
                     /translation="APKAEPARQLLDLLRTEHAGEAGIVYCLSRASVDKTAELLERSG
                     ITALPYHAGLDARTRTANQARFLREDGLIMVATIAFGMGIDKPDVRFVAHLDLPKSVE
                     GYYQETGRAGRDGLPSTAWLAYGLQDVVLQRRLIDGSEGDSAHRRRLAAHLDAMLALC
                     ETVECRRAQLLGYFGEAAGPCGNCDTCLSPPQSWDGTIAAQKLLSAVFRLNRERRQRF
                     GAGQVIDILLGRKTAKVIEHDHASLTVFGIGADLREADWRGVVRQLLARGLLAVEGNY
                     GTLALTDASSDVLGGRRQVMLRREPERAARAARPARAAKAASAAAELPAAAEAMFQQL
                     RAWRAATAKELGMPAYVIFHDATLRQIAVESPATLAELGMVSGVGESKLARYGQVILD
                     CLHHGSADKGRSVPDGPSTSS"
BASE COUNT          225 a          507 c          535 g          250 t
ORIGIN      
        1 tcatgtaagt cgggcaaccg aagctctatg accagggcag acatgatggg ccttatgagc
       61 ctgggggaac ttcgggttag aggccggtgc cctggattcc gtcgagggcg ccggagttgg
      121 tggcgaacca ttcggtttcg ccgccggggt gcggcaggat cagcccgtac tccatcgtga
      181 cgtccgagtc gatctcgttg aggccggcga ggagctgctt ttccggctgg ccggtgatcc
      241 taaaccatga tgccgagatg ttcttgatca gcttcagctt gacgtggagg ggccgtccgg
      301 cacggatcgc cccttgtctg cagagccatg gtgcagacag tccaggatta cctgcccata
      361 cctggccagc ttgctttcgc cgacgccact caccatgccg agctcggcca gggtcgccgg
      421 tgactcaacg gcgatctggc gcaatgtcgc gtcgtggaag atcacgtagg cgggcatgcc
      481 cagttccttg gcggtcgcag cgcgccaggc gcgcagctgc tggaacattg cctcggccgc
      541 cgcgggcagc tccgcagccg cacttgcggc cttcgccgcg cgggcgggcc tcgccgcccg
      601 tgcggcgcgc tcaggctcgc ggcgcagcat gacctggcgc cgcccgccca gtacgtcgct
      661 gcttgcgtcg gtgagcgcca gcgtgccgta atttccctcg acggccagca ggccccgggc
      721 cagcagctgc cgcacgactc cgcgccaatc ggcctcgcgc agatcggcgc cgattccgaa
      781 gacggtcagg gacgcatggt cgtgctcgat gaccttggct gtcttcctgc cgagcaggat
      841 gtcgatcacc tggcccgcgc cgaatctctg gcgccgctct cggttcagcc ggaacacggc
      901 cgacaggagc ttctgcgctg cgatcgtgcc gtcccaggac tgcggcggcg acaggcaggt
      961 gtcgcagttg ccgcacgggc cggcggcctc gccgaaatag cccagcagtt gcgcccggcg
     1021 gcactcgacg gtctcgcaaa gggccagcat ggcatcgagg tgggcggcca ggcggcggcg
     1081 gtgcgcgctg tcgccctcgg agccgtcgat cagcctgcgc tgcagcacga catcctgcag
     1141 gccgtaggca agccaggcag tggagggcag gccgtcccgc ccggcccggc cggtttcctg
     1201 gtaatagccc tcaacggact tgggcaagtc gaggtgcgcg acgaagcgca catcgggctt
     1261 gtcgatgccc atgccgaagg cgatcgtggc caccatgatc aggccgtcct cgcgcaggaa
     1321 gcgggcctgg ttggcggtgc gggtacgtgc gtcgagaccg gcgtgatacg gcagcgcggt
     1381 gatgccgctg cgctcgagca gctcggcggt cttgtcgacc gaggcgcgcg acaggcagta
     1441 gacgatgccc gcctcgcccg cgtgctcagt gcgcagcagg tccagcagct ggcgcgcagg
     1501 ctcggccttc ggcgcga
//
LOCUS       DASWGA010000936         8235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2250228, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000936 DASWGA010000000
VERSION     DASWGA010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8235
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2250228"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /locus_tag="VF991_21495"
     CDS             <1..779
                     /locus_tag="VF991_21495"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559083.1"
                     /translation="NVFRLKPGFGVCVDDGIASLGALNKAAGGIAKSAVIVHESGEFG
                     TGTAKLLQGKLPSIGIEAKELIAHDNPTRNFDNIALRIRSLAPDIIMMSNYGNEYMLL
                     ARTLYQQKVNVAGFYSILGGGFNYKFVKEMPDVSQYMMDVNHWYNPKSAKAVALKKRV
                     EDGGALFTFEVYLTYTNVMLLADALERAASADKEKLLAALASSTFKAELMPYGPTKFV
                     NGQNQGGKPGVMQSLKGDIEVIAPEEFASAKAVFPRPKLT"
     gene            783..1655
                     /locus_tag="VF991_21500"
     CDS             783..1655
                     /locus_tag="VF991_21500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9559084.1"
                     /translation="MLDSGIIFAGVLNGFLAGGIYVLVAVGLTLIYGVLHIINFAHGS
                     LLMLAMYAVFYLWRLVGIDPYVALPLVIAGAFVFGFVLYRLLIGRLSHGRDENILLIT
                     LGLSIVIDNAALLFFGGDTQTIDVPYAGSFVELGAAFLPLPKIISFGASLLLCAVLGL
                     YIAKSDTGKAIRAVAKERQGARLVGIDVDNIFAVSYGIGIACLGAAACLLMPTYYVTP
                     SSGHAFVLVAFTIVVLGGMGSFVGAAIGGFIIGITEALGGLLLGEQLGQIGISLIFIV
                     ILLLKPTGLFGSKA"
     gene            1652..2614
                     /locus_tag="VF991_21505"
     CDS             1652..2614
                     /locus_tag="VF991_21505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX9559085.1"
                     /translation="MSPRALPCLAGLAAAVLFPLLAPNYLVNVGMMVFFIAFIGQSWN
                     IAGGFAGQTSFGHVVFFGTGAYTSTILQVTYGWNPWLAWPVAMAAGGAVGWMIAVLSF
                     RAGLRGSYFALITLAFAEVFRILANSVPFTRGGLGMLIKADPRPINFQFRDPIWIYYL
                     ALLLCVVSILIAWQLTRSRFGARLVAIRENEDAARALGIDVFAEKVKVLALSGAMCAA
                     GGTFYAQKYLYIDPNIAFGVDKSVEMLLVSMVGGAGTIFGPLIGSFALTGINEVTRWL
                     ASVVPALKNVQPLSLVVYGIMLVLIVARLPDGLMGLFGRKPRHA"
     gene            2776..3504
                     /locus_tag="VF991_21510"
     CDS             2776..3504
                     /locus_tag="VF991_21510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9559086.1"
                     /translation="MLEVRELSKSFGGLKAVDQASLDVRQGEIVGLIGPNGAGKTTLF
                     AAIAGFHAPDAGRVAFEGRDITGLAPHEICAAGMVRTFQITQPFAKISVRENIMVGAY
                     LRTADRRLAEREAETVADTVGMAGQLDQMGSDLTVAGRKRLELARALATNPRLLLLDE
                     VMAGLNPTEIVEIVEVIKGIREAGVTILLIEHVMQAVTSLAERVYVLNQGRMIAEGTP
                     ASIAENPEVIEAYLGHGAAKVLRA"
     gene            3497..4198
                     /locus_tag="VF991_21515"
     CDS             3497..4198
                     /locus_tag="VF991_21515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9559087.1"
                     /translation="MLEVKSLKAGYGAIEVLRGVDLAVAPGEIVALLGSNGAGKSTLN
                     NNISGLYRPFDGTIRFDGREIAGAPSMRIVEAGLVQVPEGRRVFPNLSVRENLELGSY
                     RRGRAARAKNLEHVLSVFPRLEERLAQAAGTLSGGEQQMLAIGRGLMGEPRLLILDEP
                     SLGLSPLLVEEVFALIGRLNRGGLAILLVEQNVVQSLAIAHRAYVLENGRVTLSGKAA
                     DLAQDPDLRRSYLGH"
     gene            complement(4195..5346)
                     /locus_tag="VF991_21520"
     CDS             complement(4195..5346)
                     /locus_tag="VF991_21520"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018856830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9559088.1"
                     /translation="MSRRDFDVIVAGAGAAGLMCALRAGQRGRSVLLLEHADKVGKKI
                     LISGGGRCNFTNLLSRPEAFLSANPRFCKSALARYTQHDFIALVETHRIAWHEKTLGQ
                     LFCDGSARQIVAMLLAECAAAGVDVRVAHRITDIAKADGFMVSTDHGAFSSASLVLAT
                     GGLSIPKMGATGFAHDVARRFGLALTETRPALVPLTVKVPELSGVSLDVVARLGRAGF
                     REAMLFTHRGLSGPAILQISSYWREGQEICIDLLPDTDAASFLKERKRTRPKAELRTV
                     LAEALPQRLAHWLAPEGTMAARRDRDLEALAARLKAWKIVPDGTEGYAKAEVTVGGID
                     TSGLSSRTMEARQVPGLYVIGEAVDVTGWLGGYNFQWAWSSGWAAGEAV"
     gene            complement(5403..5864)
                     /locus_tag="VF991_21525"
     CDS             complement(5403..5864)
                     /locus_tag="VF991_21525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome family protein"
                     /protein_id="HEX9559089.1"
                     /translation="MMLARSILVLALALPTAASAQTPPAYRPGLGDLMTMTVQPRHLK
                     LALAGREKNWAYAAYEWHELEEALEHIAKQVPKWRELDIGQLMAATVKQPLDDLEAAI
                     KASDGQRFNTAFRQLTDACNACHKSANLAVIVIKVPDESAFPNQDFRATKP"
     gene            complement(5883..6635)
                     /locus_tag="VF991_21530"
     CDS             complement(5883..6635)
                     /locus_tag="VF991_21530"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9559090.1"
                     /translation="MSSPLQGKVALVSGAGKNIGRAIALALARDGASIVVNGRADRAA
                     VDAVVREIEAMGGKAAAAMGDVSDPAVPPRLADEASKAFGGVDILVSNAGLRRQTSFL
                     DMSYEEWRQILSVALDGAFLLGKAIVPQMVARGGGAFVALSGISTHVGTPNRCHVSAS
                     KSGLEGLMRALAVELAPHKITCNALSPGAIDTARGGAAAPAPVNRLNRPIPLKRFGTV
                     EEIAAMVRLLVGPEGTFITGQTIHVNGGEFLT"
     gene            complement(6704..7135)
                     /locus_tag="VF991_21535"
     CDS             complement(6704..7135)
                     /locus_tag="VF991_21535"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX9559091.1"
                     /translation="MFVSDILGQKGGLVFTVTPGTSVAQISQQLSTRRIGSVLVLDDD
                     SSVAGIVSERDLVRAFASHGAKAMELEARHVMTRDVVTCDPDDSIDQVMGTMTRGRFR
                     HLPVVRHGELLGLVSIGDVVKARLEEAAHETEALKAYIVAG"
     gene            7216..7929
                     /gene="queC"
                     /locus_tag="VF991_21540"
     CDS             7216..7929
                     /gene="queC"
                     /locus_tag="VF991_21540"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEX9559092.1"
                     /translation="MNAARSALVLFSGGQDSTTCLAWALERFAHVETVAFDYRQRHRI
                     ELDQRLVVLDEVRRRFPQWTSRLGEDHFIDMGVLGQISETSLTRDVGFAMKNDGLPNT
                     FVPGRNLLFFTFAAAVAWRRGIRNLVGGMCETDFSGYPDCRDNTIKALQVALNLGMDR
                     SFVLHTPLMWLDKAETWSLAQQLGGEALVEVILEHTHTCYESERGPREAWGHGCGVCP
                     ACALRKRGYIAWREGRTVV"
     gene            7988..>8235
                     /locus_tag="VF991_21545"
     CDS             7988..>8235
                     /locus_tag="VF991_21545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VUT family protein"
                     /protein_id="HEX9559093.1"
                     /translation="MTLNRSKAASIGYFLAFIACIPIANWMIGHVGTVCAPSHGPCLV
                     PVAPWGPDGHPLMAPSGVLMIGIALVLRDLVQRRLGLG"
BASE COUNT         1315 a         2756 c         2705 g         1459 t
ORIGIN      
        1 agaacgtgtt ccggctgaag cccggtttcg gtgtctgcgt cgacgacggc atcgcctcgc
       61 tgggcgcgct caacaaggcg gccggcggaa tcgccaagtc agcggtgatc gtccatgaat
      121 cgggcgagtt cgggaccggc accgccaagc tcctgcaagg caagctgccg tcgatcggca
      181 tcgaggccaa ggagctgatc gcccacgaca acccgacgcg caacttcgac aacattgcgc
      241 tgcgcatccg ctcgctggcg cccgacatca tcatgatgtc gaactacggc aacgagtaca
      301 tgctgctggc gcgcacgctc tatcagcaga aggtgaacgt cgccggcttc tattcgatcc
      361 tgggcggcgg cttcaactac aagttcgtca aggagatgcc cgacgtctcg caatacatga
      421 tggacgtgaa ccactggtac aatccaaaga gcgccaaggc ggtggcgctc aagaagcggg
      481 tcgaggacgg cggagcgttg ttcaccttcg aggtctacct gacctacacc aacgtcatgc
      541 tgctggccga cgcactggag cgcgcggcct cggccgacaa ggagaagctg cttgcggcac
      601 ttgccagctc gaccttcaag gccgagctga tgccctacgg accaaccaag ttcgtcaacg
      661 gccagaacca gggcggcaag cccggggtca tgcagtcgct gaaaggcgac atcgaagtga
      721 tcgcgccgga ggaattcgcc tcggccaagg ccgtgttccc gcggccaaag ctcacctgag
      781 gcgtgctcga ctcgggaatc atcttcgccg gcgtcctgaa cggctttttg gccggcggca
      841 tctatgtgct ggttgccgtc gggctgactc tgatctacgg cgtcctgcac atcatcaact
      901 tcgcccatgg cagcctcctg atgctggcca tgtacgccgt cttctatctg tggcggctcg
      961 tgggcatcga tccctacgtc gccctgccgc tggtgatcgc cggcgccttc gtcttcggct
     1021 tcgtgctcta tcgcttgctg atcggccgcc tgagccacgg tcgcgatgag aacatcctgt
     1081 tgatcacgct cggcctctcg atcgtgatcg acaatgcggc acttctcttc ttcggcggtg
     1141 atacccagac catcgacgtg ccctacgccg gctccttcgt cgagctgggc gcggccttcc
     1201 tgcccctgcc caagatcatc tcgtttggcg catcgctact gctctgcgcg gtgctcggcc
     1261 tctacatcgc caagagcgac accggcaagg cgatccgcgc ggtggccaag gagcggcagg
     1321 gcgcacgcct ggtcggcatc gacgtcgata atatcttcgc cgtctcctac ggcatcggca
     1381 tcgcctgcct gggcgcggca gcgtgcctgc tgatgccgac ctactacgtg acaccgtcct
     1441 cgggccatgc cttcgtgctg gtcgccttca ccatcgtggt gctgggcggc atgggaagct
     1501 tcgtcggggc ggcgatcggc ggcttcatca tcggcatcac cgaagcgctg ggcggcctct
     1561 tgctgggcga gcagctgggc cagatcggca tctcgctgat cttcatcgtg atcctgctgc
     1621 tgaaacccac cggcctgttc gggagcaagg catgagcccg cgtgccctgc cctgcctggc
     1681 gggtctcgcc gccgccgtgc tcttcccgct gttggcgccg aactacctgg tgaatgtcgg
     1741 catgatggtg ttcttcatcg ccttcatcgg ccagtcgtgg aacatcgccg ggggcttcgc
     1801 cggccaaacc tcgttcggcc atgtcgtgtt cttcggcacc ggcgcctaca cctcgaccat
     1861 cctgcaggtg acctacggct ggaacccctg gctcgcctgg ccggtcgcca tggcggcggg
     1921 cggagcggtg ggctggatga tcgccgtgct gtcgttccgt gccggcctgc ggggttccta
     1981 cttcgcgctg atcacgctgg cctttgccga ggtgttccgc atccttgcca actccgtgcc
     2041 gttcacgcgc ggcgggctcg gcatgctgat caaggccgat ccgcggccga tcaatttcca
     2101 gttcagggac ccgatctgga tctactacct cgcgctcctg ctctgcgtcg tttcgatcct
     2161 gatcgcctgg cagctcacgc gaagccgctt cggcgctcgc ctggtcgcca tccgggagaa
     2221 cgaggacgct gcccgcgcgc tcggcatcga cgtcttcgcc gagaaggtga aggtgctcgc
     2281 cttgtcgggc gccatgtgcg cggcgggcgg cacgttctat gcccagaaat atctctacat
     2341 cgatcccaac atcgcttttg gcgtcgacaa atcggtcgag atgctgctgg tcagcatggt
     2401 cggcggcgcc ggcaccatct tcggtccgtt gatcggctcg tttgccctga ccggcatcaa
     2461 cgaggtgacg cgctggctcg ccagcgtcgt gccggcgctg aagaacgtgc agccgctcag
     2521 cctggtggtc tacggcatca tgctggtgct gatcgtggcc cgcctgcctg acggcttgat
     2581 gggcctgttc gggcgaaagc cgcgccatgc ttgagcgcca cgatcgcctg cccgtcttcc
     2641 tcctctcccc cgctaggggg agaggctggg cgaggaggtt acgcccgtcg attccccctc
     2701 acctaacctc tccccctagc gggggagagg aacttgagga gcgatgcgcg aggcatgtga
     2761 tgcttgagcc gcgccatgct tgaggtacgg gaactctcca agtcgtttgg cgggctgaaa
     2821 gccgtcgacc aagcctcgct cgacgtgcgc cagggcgaga tcgtcggcct gatcgggccc
     2881 aatggagcgg gcaaaacgac gctgttcgcc gccatcgcgg gtttccacgc gcccgatgcc
     2941 ggccgggtcg ccttcgaggg ccgggacatc accgggctgg cgccgcacga gatctgcgcg
     3001 gcgggcatgg tgcgcacctt ccaaatcacc cagcctttcg cgaaaatcag cgtgcgcgag
     3061 aacatcatgg tcggcgccta tttgcgcacc gccgaccgcc ggctggccga gcgcgaagcc
     3121 gagacggtgg ccgacacggt cggcatggcc gggcaactgg atcagatggg gtccgacctt
     3181 accgtcgccg gtcgcaagcg gctggagctc gcccgcgcgc tcgccaccaa cccgcggctc
     3241 ttgttgctcg acgaggtgat ggcgggcctc aatcccaccg agatcgtcga aatcgtcgag
     3301 gtcatcaagg gcatccgcga agccggcgtc acgatcctgc tgatcgagca cgtcatgcag
     3361 gccgtgacct cgctcgccga gcgggtttat gtgctgaacc agggccgcat gatcgccgag
     3421 ggaacgccgg cgtcgatcgc ggagaaccct gaggtgatcg aagcctatct cggtcacggt
     3481 gccgccaagg tgctgcgtgc ttgaggtgaa gtccctgaaa gcgggctacg gcgccataga
     3541 agtgctgcgc ggcgtcgacc tcgcggtcgc gccaggcgag atcgtggcgc tgctgggcag
     3601 caacggcgcc ggcaagtcga ctctcaacaa taatatctcg ggcctttatc ggccgttcga
     3661 cggcacgatc cgcttcgacg gccgggagat cgccggcgcg ccgtccatgc gcatcgtcga
     3721 ggccggcctt gtccaggtgc cggagggccg gcgcgtcttc cccaaccttt cggtgcgcga
     3781 gaacctcgag ctcggcagct atcgccgcgg tcgcgccgcg cgggcgaaga acctggagca
     3841 cgttctatcg gtctttccgc gactcgagga gcggctggcc caggccgccg gcacgctctc
     3901 gggcggcgag cagcagatgc tggcgatcgg acggggcctc atgggcgagc ccagactcct
     3961 gatactggac gagccatcgc tcggcctctc gccgctgctc gtggaggagg tgttcgccct
     4021 gatcggccga ctcaatcgcg gagggcttgc catcctgctg gtcgagcaga acgtggtgca
     4081 atcgctggcc attgcgcatc gcgcctatgt gctggagaac ggccgggtca cgctgtccgg
     4141 caaggcggcc gacctggccc aagatcccga cctgcgcagg agctatctcg ggcattaaac
     4201 cgcttcgccg gccgcccagc ccgacgacca agcccactgg aagttgtagc cgcccagcca
     4261 acccgtgacg tcaaccgcct cgccgatgac gtagaggccc ggcacctggc gtgcctccat
     4321 ggtgcgcgag gagagccctg acgtgtcgat gccgcccacg gtcacttccg ccttggcgta
     4381 accctcggtg ccgtcgggca cgatcttcca ggctttcaac cgggccgcca acgcctccag
     4441 atcgcgatcg cgccgggccg ccatcgtgcc ctcgggcgcc agccaatgcg ccagtcgctg
     4501 cggcagcgct tcggccagca cggtgcgcag ctccgccttg ggccgcgtgc gtttgcgctc
     4561 cttcaggaac gaggcggcgt cggtatcggg cagcaggtcg atgcaaatct cctgcccctc
     4621 gcgccagtag gaggaaatct gcaagatcgc cgggcccgac aggccgcgat gggtgaacag
     4681 catggcttcg cggaagcctg cccggccaag ccgcgccacg acgtccagcg atacgccgct
     4741 cagctcgggt accttcacgg tgagcggcac cagggcgggc cgcgtctcgg tcaacgccag
     4801 tccgaaacgg cgtgcgacgt cgtgcgcgaa gccggtggcg cccatcttcg ggatcgacag
     4861 gccgccggtc gccagcacca gcgaggccga agagaacgcg ccatggtcgg tgctcaccat
     4921 gaagccgtcg gccttggcga tgtcagtgat gcgatgggcc acccgtacat cgacgccggc
     4981 ggcggcgcac tcggccagca acatggcgac gatctggcgt gccgaaccgt cgcagaaaag
     5041 ctggcccagg gtcttttcgt gccaggcgat gcggtgcgtc tccaccaggg cgatgaaatc
     5101 gtgctgggtg taacgcgcca gcgccgattt gcagaaacgc gggttggccg acagaaaggc
     5161 ttccggccgg ctcaaaaggt tggtgaaatt gcagcgcccg ccgcccgaga tcaggatctt
     5221 cttgccgacc ttgtcggcat gctccagcag caggacgctg cggccgcgct ggccggcgcg
     5281 cagcgcgcac atcaggcccg cggcgccggc gcccgcgacg atgacgtcga aatcgcgccg
     5341 gctcacgccg gcgccatcgt caccacgagg tacggcatca tttcccgcgt cccctcgttc
     5401 tcctagggct tcgtcgcgcg gaagtcctgg ttgggaaagg ccgattcgtc cggcaccttg
     5461 atgacgatca ccgcgagatt ggcgctcttg tggcaagcgt tgcaggcatc ggtgagttgg
     5521 cggaaggccg tgttgaagcg ctgcccgtcg cttgccttga tcgccgcttc gaggtcgtcg
     5581 agcggctgct tgaccgtggc cgccatgagc tggccgatgt cgagctcgcg ccatttcggc
     5641 acctgcttgg cgatgtgctc gagcgcctcc tcgagttcgt gccattcgta ggcggcatag
     5701 gcccagttct tttcccggcc ggccagcgcc agtttcagat ggcgtggttg caccgtcatc
     5761 gtcatcaggt cgccgaggcc gggccggtag gccggtggcg tctgagcgga cgccgccgtc
     5821 ggaagggcga gcgccaggac aaggatcgag cgcgcgagca tcatcgtcgt ctcctctttg
     5881 gcttacgtca gaaactcgcc gccattcacg tgaatggtct ggccggtgat gaaggtgcct
     5941 tcgggcccga ccagcaggcg caccatggcg gcgatctcct cgaccgtgcc gaagcgcttt
     6001 agcgggatcg gccggttgag ccggttgacc ggcgccggcg ccgccgcgcc gccgcgcgcg
     6061 gtgtcgatgg ccccgggcga cagcgcattg caggtgatct tgtgcggcgc gagctcgacg
     6121 gcgagcgcgc gcatcaggcc ttcgaggccc gacttggaag ccgagacgtg gcagcggttg
     6181 ggcgtgccga catgggtcga gatgcccgac agggcgacga aggcgccgcc gccgcgcgcc
     6241 accatctgcg gcacgatcgc cttgcccagc aggaaggcgc cgtcgagcgc caccgacagg
     6301 atttgtcgcc actcctcgta ggacatatcg aggaaggagg tctgccgtct gagccccgcg
     6361 ttgctcacca ggatgtcgac gccgccgaac gccttgctgg cctcgtcggc caggcgcggc
     6421 ggcaccgcgg gatccgagac gtcgcccatc gccgcggccg ccttgccacc catcgcctcg
     6481 atctcgcgca cgacggcgtc gaccgccgcg cggtcggcac gaccgttgac gacgatcgag
     6541 gcgccgtcgc gcgcgagggc aagcgctatc gctcgaccga tattcttgcc ggcgcccgaa
     6601 acgagcgcga ccttgccttg caggggtgat gacatgcgat ctccggacga ggggtcgccc
     6661 ggaccctagc ggagatcgtc ctggaactta agagacgtcg ggatcagcct gcgacgatgt
     6721 aggctttgag cgcctcggtc tcgtgcgcag cctcttccag ccgggctttc accacgtcgc
     6781 cgatcgagac caagccgagc aactcgccgt ggcggacaac cgggaggtgg cggaagcggc
     6841 cgcgggtcat ggttcccatc acctggtcga tcgaatcgtc gggatcgcag gtgacgacat
     6901 cgcgggtcat gacatgccgc gcttccagct ccatcgcctt ggcgccgtga ctggcgaatg
     6961 cacgcacgag atcgcgctcg gagacgatgc cggcaaccga gctgtcgtcg tcgagcacga
     7021 ggaccgagcc gatacgccgc gtactgagct gctgggaaat ctgcgcgacc gaggtgcccg
     7081 gcgtcacggt gaataccagg ccgcccttct gcccgagaat gtcggagacg aacatggttc
     7141 cctcctcacc gaatagggac gttgagaaaa gcaacgcggt ggcgcggaga aaggttgcag
     7201 gccataaagc cctccatgaa cgccgctcga tcggccctcg tcctgttctc cggtggccag
     7261 gattccacca cgtgtctggc ctgggcgcta gagcgatttg cgcatgtcga gacggtcgct
     7321 tttgactacc ggcaaaggca tcgaatcgaa ctggatcaac gacttgtggt gctggacgaa
     7381 gtccgccggc ggttcccgca gtggacgagc cgcctgggtg aggaccattt catcgacatg
     7441 ggcgtgctgg gccagatcag cgaaacctcg ctcacccgcg acgtcggctt cgcgatgaag
     7501 aacgacggcc tgcccaacac cttcgtgccc ggccgcaatc tcctgttctt caccttcgcc
     7561 gccgccgtcg cctggcggcg cggcatccgt aacctggtgg gcggcatgtg cgagacggat
     7621 ttctccggtt atcccgactg ccgcgacaac accatcaagg cgctgcaggt cgcgctgaac
     7681 ctcggcatgg accgcagctt cgtgctgcac acgccgctga tgtggctcga caaggcggag
     7741 acctggtcgc tcgcccagca gctcggcggc gaggcgctgg tcgaggtcat cctcgagcac
     7801 acccacacct gctatgaaag cgaacgcggg ccgcgcgagg cctggggcca tggctgcggc
     7861 gtctgcccgg cctgcgcctt gcgcaagcgc ggctacatcg cctggcgcga aggcaggacg
     7921 gtcgtctagc gggttcccga tggcgccgag acctgctagg gagcggcccg ccatgacgac
     7981 caaacatatg accctcaatc gcagcaaggc tgcgtcgatc ggctattttt tggccttcat
     8041 tgcctgcatc cccatcgcca actggatgat cggccatgtc ggcacggtct gtgcgccatc
     8101 tcatggtccc tgcttggtgc cggtggcgcc gtggggcccg gacgggcatc cgctgatggc
     8161 gccgtccggc gtgctgatga tcggcatcgc tctggtgctg cgcgatctcg tgcagcggcg
     8221 gctcggcctc ggcat
//
LOCUS       DASWGA010000937         2875 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1882698, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000937 DASWGA010000000
VERSION     DASWGA010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1882698"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..766)
                     /locus_tag="VF991_21550"
     CDS             complement(<1..766)
                     /locus_tag="VF991_21550"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9559094.1"
                     /translation="MSAIAVTNDNSRGWLGVTLVVLSACAFSTAGFFTRLIDTDVWTM
                     LFWRGLFGGLFIAGYVVWRERAGALAALRRIGVPGLVAAGCSTAATICFVNALRQTTV
                     ADVLVINATAPFITAALAWAWTGDRERWTTLAASGVALLGVVVTVGAAVGAGRLFGDV
                     LALLMTILISAMMVVIRRHRAVSMLPAAALSAFLCAVVVWPWADPASATGWNFVNLIL
                     FGTTQFGLGLLLLTLGTRLISAPRSALIGALETPLAP"
     gene            824..1522
                     /locus_tag="VF991_21555"
     CDS             824..1522
                     /locus_tag="VF991_21555"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family protein"
                     /protein_id="HEX9559095.1"
                     /translation="MRRADRLFDVIQVLRTARKPVTAATLAEELEVTVRTVYRDVATL
                     QARRVPIEGAPGLGYVLRKGFDLPPLMFTVDEIEAVTVGARMVQRLRDPELQAAARRV
                     LDKVTVVLPESLRGHVADAPFYVSQGEAATPRGVDMAEVRSAIRDRRKLRIAYVDEKH
                     RRTRRTVWPLAMAYYVDVTLVGAWCELRKDLRNFRVERIAASRVLAERFQDHNGRLLA
                     QWLALPKDRPVSRL"
     gene            1519..1845
                     /locus_tag="VF991_21560"
     CDS             1519..1845
                     /locus_tag="VF991_21560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559096.1"
                     /translation="MIAGIVPAIDIEAGGRQPGMTERGELRAIEDEERRRDRVETEGV
                     AFSQHHAGGLAPDFDDERFGHGGISLVRLTWSRSNESTRVEIVEAAPARSKDLSCGIN
                     VAMNSF"
     gene            2239..>2875
                     /locus_tag="VF991_21565"
     CDS             2239..>2875
                     /locus_tag="VF991_21565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9559097.1"
                     /translation="MHQRKIPSSGEMLPVVGCGTWRTFDVGAKPEERAPLAEVLRLLF
                     DAGGSVIDSSPMYGAAEGMVGDLLAAAATRDKAFIATKVWTSGRDNGIAQMKKSMALL
                     KADRLDLMQIHNLVDWRAHLPTLRAWKAEGRIRYLGVTHYTQSAHAELESVLRAEKWD
                     FVQINYALDDRAVERSLLPLAAERGTAVIVNQPFGGGGLLRRLSGRTLPDWA"
BASE COUNT          499 a          965 c          985 g          426 t
ORIGIN      
        1 ccggcgccag cggcgtttcg agcgcaccga tgagagccga ccgcggcgcc gagatcaggc
       61 gcgtgccgag ggtgagcagc agaaggccga ggccgaactg ggtggtgccg aaaaggatga
      121 gattaacgaa attccaaccg gtggcgctcg ccggatcggc ccacggccag acgacgacgg
      181 cgcacaggaa ggccgagagc gccgccgccg gcagcataga gacggcgcga tggcggcgga
      241 tcaccaccat catggccgag atcaggatcg tcatgaggag cgccaggacg tcgccgaaca
      301 ggcgaccggc gccgacggcg gcgccgaccg tgaccaccac gccgagaagc gccacgccac
      361 tcgccgccag cgtcgtccag cgctcgcggt cgcccgtcca cgcccaggcg agggccgcgg
      421 tgatgaaggg cgcggtggcg ttgatcacca gcacgtcggc caccgtcgtc tggcgcagcg
      481 cattgacgaa gcagatggtg gccgccgtcg agcagccggc cgcgacgagg cccggcacgc
      541 cgatacggcg tagcgccgcc agggcgcctg cgcgctctcg ccagacgacg tagcccgcga
      601 tgaacaggcc gccgaaaagg ccgcgccaga acagcatggt ccagacgtcg gtgtcgatca
      661 ggcgggtgaa aaagccagcc gtgctgaaag cgcaggccga gagcacgacc agggtgacgc
      721 ccagccagcc tcggctgttg tcgttcgtca cggcgatagc ggacactgat tcacctccga
      781 aacgacccta gcgcaggcct cctgacatcg ttatgtcagg agcatgcgcc gcgccgaccg
      841 attgttcgac gtcatccaag tcctgcgcac ggccaggaag ccggtcacgg cggccaccct
      901 ggccgaggag ctggaagtga ccgtgcgcac ggtctatcgc gacgtggcga ccctgcaggc
      961 ccgccgcgtg ccgatcgagg gcgcgcccgg cctgggctac gtgctgcgca agggcttcga
     1021 cctgccgccg ctgatgttca cggtcgacga gatcgaagcc gtcacggtcg gcgcccgcat
     1081 ggtgcagcgc ctgcgcgatc cggagttgca ggccgccgcc cgccgcgtgc tcgacaaggt
     1141 gacggtcgtg ctgcccgaga gcctgcgcgg ccatgtcgcc gatgcgccgt tttacgtctc
     1201 gcagggagaa gccgcgacgc cgcgcggcgt cgatatggcc gaggtgcgca gcgccatccg
     1261 cgaccgccgc aagctgcgca ttgcctatgt cgacgagaag caccggcgca cgcgccgcac
     1321 cgtctggccg ctcgccatgg cctactacgt cgacgtcacg ctggtcggcg cctggtgcga
     1381 gctccggaag gacttgcgca acttccgcgt cgagcggatc gccgcgtcac gggtgctggc
     1441 cgagcgcttc caggatcaca acggcaggct gctggcgcaa tggctcgccc tgcccaagga
     1501 tcggcctgtt tccaggctgt gatcgccggg atcgtgcccg cgatcgacat cgaggcgggc
     1561 ggccgccagc ctggcatgac cgagcgtggt gaattgcgcg ccatcgagga cgaagaacgg
     1621 cggcgcgatc gcgtggaaac ggaaggcgtc gccttctctc agcaccacgc cggcgggctt
     1681 gccccagact tcgacgacga acggttcggt catggcggga tctccctggt caggctgact
     1741 tggtctcgat ccaacgagtc gacaagggtg gagattgtcg aagctgcccc ggcacgaagc
     1801 aaagacctct cgtgcggcat caatgtggca atgaattctt tttgatatga cgagacgatg
     1861 aacccttcac ccgttctgca caggcggcat cgctcttttg agatctgcct gcgtataagg
     1921 cttgcgcatg aaggtgatgt gcccgtcgtg ggcgaaccgt cggcgtagat caggatcgtc
     1981 gtaaccgctc gccacgacga tcggcagatc gggacggcgc gcgtagctcg gccaccagca
     2041 catcgccttt gacgtcgggc tcgggccttg cgatggtgcc caaggtgatc ctgaatggcc
     2101 aaccggccga tgtccgcgcc gacggacaaa cgttccagat ttcgctcgcc tgacatgaac
     2161 ttgaagcgct cgactttcct cggccttgcc ggcgccggct tgttcgcacg ccggacgatg
     2221 gcgcaacccg ggagccgcat gcatcaacgc aagatcccgt cctccggcga gatgctgccg
     2281 gttgtcggct gcggcacctg gcggaccttc gacgtcggcg ccaagccgga ggaacgcgca
     2341 ccgctcgccg aggtgctgcg cctgctgttc gacgcgggcg gctcggtgat cgactcgtcg
     2401 ccgatgtacg gcgccgccga gggcatggtc ggcgatttgc tggcggctgc cgcgacgcgc
     2461 gacaaggcct tcatcgccac caaggtctgg acctcgggcc gcgacaacgg catcgcccag
     2521 atgaagaagt cgatggcgct gttgaaggcc gaccgcctcg acctgatgca gatccacaat
     2581 ctggtcgact ggcgcgcgca tctgccgacc ctgcgcgcct ggaaggccga ggggcgcatc
     2641 cgctatctcg gcgtgaccca ttacacgcaa agcgcccacg ccgagctcga atcggtgctg
     2701 cgcgcggaga aatgggattt cgtgcagatc aactatgcgc tcgacgatcg cgcggtcgag
     2761 cgcagcctgc tgccgctcgc agccgaacgc ggtacggccg tgatcgtcaa ccagccgttc
     2821 ggcggcggcg gcctgctgcg ccggctttca ggccgcacgc tgccggactg ggcgg
//
LOCUS       DASWGA010000938         6323 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_110446, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000938 DASWGA010000000
VERSION     DASWGA010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6323
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110446"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..388
                     /locus_tag="VF991_21570"
     CDS             <1..388
                     /locus_tag="VF991_21570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX9559098.1"
                     /translation="EGLCGVVLIHHPPLTTESRFKRLTDAAAFQAMIRRTGCELVLHG
                     HNHRSEVARITGLDGPVPVIGVTSASAAPGSKYGRARYHLIHVERENEGWRIGVELRA
                     LRKDGAGCEPDGDLVFHSGRALAVVA"
     gene            393..1541
                     /locus_tag="VF991_21575"
     CDS             393..1541
                     /locus_tag="VF991_21575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="dATP pyrophosphohydrolase"
                     /protein_id="HEX9559099.1"
                     /translation="MASPDIVVSPVGGKSDLKAFIDLPKRLYAGHKGYIAHLNVERQE
                     AFSPQKNPLFRHVEVQFFLARRAGRVVGRITAQVDRAYLERYADDTGHFGCLVAEDDP
                     AIFAALFAAAEAWLGAKGMKRVTGPFSLSVNEEVGLLVWGFDSRPVLMVPYDPPYAGS
                     RVEGCGYAKIKDLFSYDYDVQNAPETIGAKLMARAGMTGRVKVRTANMKMFDAEVRTL
                     VGIFNDAWSDNWGFVPFTQAEIDHASKAFGPVIVPDLAVFVEVDDEAVAFIVALTNLN
                     EAIQDFDGRLGPINLAKLLWRLKIAGVGSTRVPLMGVKKKFRHHPLMGAGLAMMAIDQ
                     LRQNGKRLGKTSAELGWILEDNKATNNIIRSVGGVHYKTHRLYEKALG"
     gene            1538..2788
                     /locus_tag="VF991_21580"
     CDS             1538..2788
                     /locus_tag="VF991_21580"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559100.1"
                     /translation="MNAPPPRPAVRPPSAFTPFANRAFLALWMANVLSNVGGWMQSTG
                     AAWEMTSLTPEPIFVALLAAAGTLPMFLFCFLAGILADRFERRRYIIVCQVWMMGVAA
                     TLAVLAYYGRLTHWNLLALAFCMGLGNAMNAPAWHAVVPEIVSGPMLRPAIALNSAGF
                     NLARTVGPVIGQILLSLVGVFLLFAINACTYIGVIFAMSRWRRPAEARAAQRREGFVE
                     AARTGIAFVRNSAELKAIFGRGLCFFVPGIAIGTLLPVIGRFELGLDEFAFGILYAVF
                     GVGAVAGAILMPTVNRLLGPDRANIWAMGLHAAATLIAALVMTPYVVGACIALLGACW
                     ITVMANNTTAIQSILPNFMRARGMAVHQMVFFGAMVAGSLLWGKIATLFGTQTSLIVS
                     AAALIPATMLAASIRLPGSTLPRG"
     gene            3202..4332
                     /locus_tag="VF991_21585"
     CDS             3202..4332
                     /locus_tag="VF991_21585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HEX9559101.1"
                     /translation="MTERIFRYLREQQPETPCLVIDLDVVENNFRRMRELLPAAHIFY
                     AVKANPAAQILSRLSGLGSKFDTASRGEIELVQATGVAVDRISFGNTIKKEKDIAWAY
                     QQGVRLFAFDSEAELQKLSRAAPGSRVFCRVLVDCGGAEWPLSKKFGCAPEMAKDLLR
                     KAKDWGLEAYGISFHVGSQQTDLEQWDKALGQVSQMFFALAEEGVDLRMVNLGGGFPA
                     RYRAEVSSIEAYCEAVGRALVRHFGNRMPEVIIEPGRSMVGDAGVIQSEVVLVSRKAA
                     NDRKRWVYLDIGKFSGLAETMGESIKYRLRTGRDGTRVGPVVLAGPTCDSADILYEKT
                     EYKLPLALKPGDKVEILSTGAYTTTYSSVAFNGFAPLKAICI"
     gene            4431..5861
                     /locus_tag="VF991_21590"
     CDS             4431..5861
                     /locus_tag="VF991_21590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9559102.1"
                     /translation="MAKNVAGRKYLDFKGRMVMIGFGSIGQGVLPLILRHIGIKPSQI
                     TIIAEDDRGGLPETERYGVEFIKQRLTQANYAKILAGRLAKGDFLVNLSVEVASTALV
                     ELCQEQGALYIDTCIEPWPGGYTDPNLSVSLRSNYALRENMLKLAPKYRGGPTAVIAH
                     GANPGLVSHFVKQALMNVAKDSGVNAKVPADREGWGRLARRLGVKVIHIAERDTQVSP
                     IPKEVGEFVNTWSIDGFVSEGSQPAEMGWGTHEKALPRDGARHKFGCGAAIYLDRPGL
                     LTRARTWTPLEGPFHGFIITHNESISIADYFTLRDGGKVVYRPTVHYAYHPCDQAIMS
                     MHEIAGKNLHQQKRQRLIVDEITSGRDELGVLLMGHKKGAYWYGSQLDIDETRELAPY
                     NNATSIQVCAPVLSGIIWALENPDRGIVEADEMDFARNLEICMPYLGPVVGEYSDWTP
                     LQDRGRLFPEDVDRSDPWQFKNFRVV"
     gene            5942..>6323
                     /locus_tag="VF991_21595"
     CDS             5942..>6323
                     /locus_tag="VF991_21595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559103.1"
                     /translation="MGESGRMSRRGLLQASLLGGGVLAGCSTAPGGSSFDAGPPLVPI
                     RARTDRIFDIAVCLRPFRPAGPRVDVERLGDTLVVHNYGHGGSGWSLSWGSSARAVRL
                     EGRARHLLPHRREVRSGGIGERNAR"
BASE COUNT         1012 a         2154 c         2068 g         1089 t
ORIGIN      
        1 cgagggtttg tgtggggtcg ttctgatcca ccatccgccg ctcaccaccg agagccgctt
       61 caagcgcctg accgacgccg ccgccttcca ggcgatgatc cgccgcacgg gctgcgagct
      121 cgtcctgcac ggccacaatc accgcagcga agtggcgcgc attaccggac tggacggacc
      181 ggtgcccgtg atcggcgtca cctcggcctc ggcggcgccg ggcagcaagt acggccgcgc
      241 gcgctaccac ttgattcacg tcgagcgcga gaacgagggc tggcggatcg gcgtcgaatt
      301 gcgcgcgctg cgcaaagatg gcgcgggctg cgagcccgat ggcgacctcg tgtttcacag
      361 cggccgggcg cttgccgtgg tagcttgagg caatggcctc tcctgacatc gtcgtgtcgc
      421 cggttggcgg caagtccgac ctcaaagcgt tcatcgatct gcccaagcgg ctctatgccg
      481 gccacaaggg ctacatcgcc cacctcaatg tcgagcgcca ggaagccttc tcgccgcaga
      541 agaacccgct gttccgccac gtcgaggtgc agttcttcct ggcgcgccgc gccggccgcg
      601 tggtcgggcg catcaccgcc caggtcgacc gcgcctatct cgagcgctat gccgacgaca
      661 ccggccattt cggctgcctg gtggccgagg acgacccggc gattttcgcc gccctgttcg
      721 ccgccgccga ggcctggctc ggcgccaagg gcatgaagcg ggtgaccggc ccgttcagcc
      781 tgtcggtcaa cgaggaggtc gggctgctgg tgtggggctt cgacagccgc ccggtgctga
      841 tggtgcccta cgatccgcct tatgccggca gccgcgtcga gggctgtggc tacgccaaga
      901 tcaaggatct cttctcctac gactacgacg tccagaacgc gccggagacg atcggcgcca
      961 agctgatggc gcgcgccggg atgaccggcc gggtcaaggt gcgcaccgcc aacatgaaga
     1021 tgttcgacgc cgaggttcgc accctggtcg gcatcttcaa cgacgcctgg agcgacaatt
     1081 ggggcttcgt gcctttcacc caggccgaga tcgaccacgc ctccaaggcg ttcggaccgg
     1141 tgatcgtgcc cgacctcgcg gtgttcgtgg aggtcgacga cgaggcggtg gccttcatcg
     1201 tggcgctcac caacctcaac gaggcgatcc aggacttcga cggccggctg gggccgatca
     1261 acttggccaa gctgctgtgg cggctgaaaa tcgccggcgt cggcagcacg cgggtgccgc
     1321 tgatgggggt gaagaagaag ttccgccatc atccgctgat gggcgcgggg cttgccatga
     1381 tggcgatcga ccagctccgg cagaacggca agcggctggg caagaccagc gccgagctgg
     1441 gctggatcct cgaggacaac aaggcgacca acaacatcat ccgctcggtc ggcggcgtgc
     1501 actacaagac ccatcggctt tacgaaaagg cgttggggtg aacgctccgc cgccgcgccc
     1561 ggccgtccgg ccgccgtcag ccttcacccc gttcgccaac cgcgccttcc tggcattgtg
     1621 gatggccaac gtgctgtcca acgtcggcgg ctggatgcag agcaccgggg cggcctggga
     1681 gatgaccagc ctgacccccg agccgatctt cgtcgccctg ctggcggcgg ccggcacctt
     1741 gccgatgttc ctgttctgct ttctcgccgg catcctggcc gaccggttcg agcgccggcg
     1801 ctacatcatc gtctgccagg tctggatgat gggcgtcgcc gcgaccctgg cggtgcttgc
     1861 ctattacggc cggctgaccc actggaacct tttggcgcta gccttctgca tgggcctggg
     1921 caacgccatg aacgcgccgg cctggcacgc cgtggtgccc gagatcgtct ccggcccgat
     1981 gctgcggccg gccattgcgc tcaacagcgc gggcttcaac ctcgcccgca ccgtcggccc
     2041 ggtgatcggc cagatcctgc tcagcctggt cggcgtcttc ctgctgttcg ccatcaacgc
     2101 ctgcacctac atcggcgtga tcttcgccat gtcgaggtgg cggcggccgg ccgaggcgcg
     2161 cgccgcccag cgccgcgagg gcttcgtcga ggccgcccgc accggcatcg ccttcgtacg
     2221 gaactcggcc gagctcaagg ccatcttcgg tcgcggcctc tgcttcttcg tgcccggcat
     2281 tgccatcggc accctgctgc cggtgatcgg ccgcttcgag ctcggcctcg acgagttcgc
     2341 cttcggcatc ctctacgcgg tgttcggcgt cggcgcggtg gccggcgcca tcctgatgcc
     2401 gacggtgaac cgcctgctcg gccccgaccg cgccaacatc tgggcaatgg gcctgcatgc
     2461 ggcggcgacg ctgatcgcgg cgctggtcat gacgccctac gtggtgggcg cttgcatcgc
     2521 cctcttgggc gcctgctgga tcaccgtgat ggccaacaac accaccgcca tccagtcgat
     2581 cctccccaac ttcatgcggg ctcgaggcat ggcggtacac cagatggtgt ttttcggcgc
     2641 catggtcgca ggctcgctgc tgtgggggaa gatcgccaca ctgttcggca cgcagacctc
     2701 gctgatcgtg tcggccgcgg cgctgatacc ggcgacgatg ctggccgcgt cgatccgctt
     2761 gccaggctcg acgctgcctc gcggctgaca ccgttgtgtg ccatttgcaa cacaagacac
     2821 caaagaattc cccatgcggg gaagaatctc cttgtaactg cgtcgattag ttgtatttac
     2881 gaaatcaaga cgcccacgca cgtgccgctg gcccttagtg gttacgcaac gacggaaagt
     2941 gttctttttg gcagtgccgg cttcgagccg ggtccgggaa ggagcttctg atatgtttgc
     3001 ttaccgcgcg gggcgcattc cccgctatca agtcaattgc ccggtgagtt cagaccgggc
     3061 cgccttgttc gatcttccgc ttctgcggac caagaccccg tcgagtatcg gctgacgcgc
     3121 gctgcctgtt tagcaccgtc cgtcccgttc gacgttttcc accgaaccag cctgacctga
     3181 ttgacgggga accccccagc gatgaccgag cgtatttttc gttatctccg agagcagcag
     3241 cccgagacgc cgtgcctggt gatcgacctt gacgtggtcg agaacaattt tcggcgcatg
     3301 cgcgagttgc tgccggcggc ccacatcttc tacgccgtga aggccaaccc ggcggcgcag
     3361 atcctgtctc gcctgtccgg cctcggctcc aagttcgaca ccgcaagccg cggcgagatc
     3421 gagctcgtgc aggccaccgg cgtcgccgtc gaccgcatct ccttcggcaa caccatcaag
     3481 aaggagaagg acatcgcctg ggcctaccag cagggcgtgc gcctgttcgc cttcgacagc
     3541 gaggccgagc tgcagaagct cagccgcgcg gcgcccggct cgcgggtgtt ctgccgcgtg
     3601 ctggtcgact gcggcggcgc cgaatggccg ctcagcaaga agttcggctg cgcgccggag
     3661 atggccaagg acctcctgcg caaggccaag gactgggggc tcgaggccta cggcatctcc
     3721 ttccatgtcg gcagccagca gaccgacctc gagcagtggg acaaggcgct gggccaggtc
     3781 tcgcagatgt tcttcgcgct cgccgaagag ggcgtcgacc tgcgcatggt caacctgggt
     3841 ggcggcttcc cggcccgcta ccgcgccgag gtgagcagca tagaagccta ctgcgaggcg
     3901 gtcggccgcg ccctggtgcg ccatttcggt aaccgcatgc ccgaggtcat catcgagccc
     3961 ggccgctcca tggtgggcga tgccggcgtg atccagagcg aggtcgtgct ggtctcgcgc
     4021 aaggcggcca acgaccgcaa gcgctgggtc tacctcgaca tcggcaagtt cagcgggctg
     4081 gccgagacca tgggcgagag catcaagtac cggctgcgca ccggccgcga cggcacgcgc
     4141 gtcggaccgg tggtgctcgc cggcccgacc tgcgactcgg ccgacatcct ctacgagaag
     4201 accgagtaca agctgccgct ggcgctgaag cccggcgaca aggtcgagat cctgtcgacc
     4261 ggcgcctaca cgacgaccta ctcgtcggtc gctttcaatg gcttcgcgcc gctcaaggcg
     4321 atctgcatct gatcctccca gcttcgctgg cgaggtgaca ccgacggggc cttgagaaag
     4381 gccccgtcgc cgtttatcga ccactcaccg aaacaggcgg gggcgctgga atggcgaaga
     4441 acgtcgcggg caggaagtat ctcgacttca agggccgcat ggtcatgatc ggcttcggct
     4501 cgatcggcca gggcgtgctg ccgctcatcc tgcgccatat cggcatcaag cccagccaga
     4561 tcaccatcat cgccgaggac gaccgcggcg gcctgcccga gaccgagcgc tacggcgtcg
     4621 agttcatcaa gcagcgcctg acccaggcca actacgccaa gatcctggcg ggtcggctcg
     4681 ccaagggcga tttcctggtc aatctctcgg tcgaggtcgc ctcgacggcg ctggtcgagc
     4741 tctgccagga gcagggcgcg ctctacatcg acacctgcat cgagccttgg ccgggcggct
     4801 acaccgatcc caacctgtcg gtgtcgctgc gctccaacta cgcgttgcgc gaaaacatgt
     4861 tgaagcttgc gcccaagtac cgcggcggcc cgacggcggt gatcgcccat ggcgccaatc
     4921 ccgggctggt ctcgcacttc gtgaagcagg cgctgatgaa cgtcgccaag gatagcggcg
     4981 tgaacgcgaa ggtgccggct gaccgcgagg gctggggccg gctggcgcgg cggctgggcg
     5041 tcaaggtgat ccacatcgcc gagcgcgata cccaggtttc gccgatcccg aaggaggtcg
     5101 gcgagttcgt caacacctgg tcgatcgacg gcttcgtctc cgagggcagc cagcccgccg
     5161 agatgggttg gggcacgcac gagaaggcgc tgccgcgcga tggcgctcgc cacaagttcg
     5221 gctgcggcgc ggcgatctat ctcgaccggc caggcctact cacccgcgca cgcacctgga
     5281 cgccgctcga ggggccgttc cacggcttca tcatcaccca caacgagtcg atctcgatcg
     5341 ccgactactt cacgctgcgt gacggcggca aggtcgtcta ccggccgacc gtgcattatg
     5401 cctatcaccc gtgcgaccag gcgatcatgt ccatgcacga gatcgccggc aagaacctgc
     5461 atcagcagaa gcgccagcgc ctgatcgtcg acgagatcac gtccggccgc gacgagctcg
     5521 gcgtgctgct gatgggccac aagaagggcg cctactggta cggctcgcag ctcgacatcg
     5581 acgagacgcg cgagcttgcc ccctacaaca acgccacctc gatccaggtt tgcgcgccgg
     5641 tcctgtcggg catcatctgg gcgctcgaga accccgaccg cggcatcgtc gaggccgacg
     5701 aaatggattt cgcccgcaac ctcgagatct gcatgcccta tctcggaccg gtggtcggcg
     5761 agtacagcga ctggacgccg cttcaggatc gcggccggct gttccccgag gacgtcgatc
     5821 gctccgaccc gtggcagttc aagaacttcc gcgtcgtctg atctgggtct cctcaggatt
     5881 tgaactgcat ccaggggcgg gccaatcttg gacgcttcga tcagattgga gagggtgaga
     5941 cgtgggcgaa agcgggcgga tgagccggcg cgggctgctg caggcgtcgc tgctgggcgg
     6001 cggcgtgttg gcaggctgtt cgacggcgcc cggcggatcg tccttcgatg ccggcccgcc
     6061 gctcgtgccg atccgcgcgc ggactgaccg gatcttcgac atcgccgtct gcctgcgccc
     6121 gtttcgtccc gccgggccga gagtggacgt cgagcgcctg ggcgacactc tggtcgtgca
     6181 caactacggc catggtggca gtggctggtc gctctcctgg ggctccagcg cccgggcggt
     6241 gcgccttgaa ggccgtgcgc gccatcttct cccacaccgc cgcgaagtcc ggtccggcgg
     6301 cattggcgag cgcaatgcgc gag
//
LOCUS       DASWGA010000939         3513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2015159, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000939 DASWGA010000000
VERSION     DASWGA010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3513
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2015159"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1166
                     /gene="xseA"
                     /locus_tag="VF991_21600"
     CDS             <1..1166
                     /gene="xseA"
                     /locus_tag="VF991_21600"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:NF014640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEX9559104.1"
                     /translation="KLLEDRRKKLAAEGLFDLDRKRELPFLPEVIGVVTSPSGAVIRD
                     ILHRLADRFPCHVLVWPVAVQGEKAAGEVAAAIAGFNRLSVEGAVPRPDILIVARGGG
                     SLEDLWAFNEEIVVRAAAASTIPLISAVGHETDTTLIDFAADRRAPTPTAAAEMAVPV
                     RADLIAQTLDFGKRTMACMNRVLREATLAVTGLARGLGDPLRLIEERQQRLDVSGERL
                     ALATRQLVERRGHQLAAARLVGPQRVMDAKQQLLDSEVRALRSAGERFKADTLQKAEH
                     MLERLEQYGERLKRHGGDLLQQGRRQVDQLGKLLESYSFHSVLSRGFALVRDQDGHPV
                     LAAAKTQAGDTLSIEFADGRIGAKVIDGAGSAPRPAAAPRRRDGGSGNQGSLL"
     gene            1179..1910
                     /locus_tag="VF991_21605"
     CDS             1179..1910
                     /locus_tag="VF991_21605"
                     /inference="COORDINATES: protein motif:HMM:NF006093.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEX9559105.1"
                     /translation="MTTAPLAAETIKNFLYASTATVSMQMLKRGFRNAAVNGVRPLNP
                     KATRLVGPAYTLRYIPGREDLDKPPTPNDPPSAQRAAIEETPAGCVLVIGTEGNTRSG
                     TLGDILALRLKVRGVAGVLSDGAIRDTPVIGKFDFPVFCSAAAAPPSMNHLHPVEVQT
                     PVGICGVAVYPGDVIVADEDGAIVVPRHLADEVARDSFEQERLEKFVAIRIGQGKPIT
                     GTYPPNDETKALYQAWIKAGEPPNG"
     gene            complement(1882..2412)
                     /locus_tag="VF991_21610"
     CDS             complement(1882..2412)
                     /locus_tag="VF991_21610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX9559106.1"
                     /translation="MPKPDLDAIDRRIVSALQADGRLTNIDLAGRVGLSPSPCLRRVK
                     RLERDGYIEAYRAVLRRDRVGLGFSVFVGVKIDGHANQRALGFEKAIAAMPEVVACHL
                     VSGEADYFLEIVVPDLDNYRRFLVDKLLDLPIVREVRSNIAIQTVKAGAPLPLDHLDP
                     PRAVRPGASRSAARRP"
     gene            2546..2953
                     /locus_tag="VF991_21615"
     CDS             2546..2953
                     /locus_tag="VF991_21615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9559107.1"
                     /translation="MAYRSEASVAAIDTLRGAVTRYFDLMYDSDILRFDQVFRSTAQL
                     HGMRNGEMRVLTAEAYREALARTPSPASQNAPREEEILLIDVTSNSQALVKVRVRIKA
                     IVYVDYLSYHHIDGDWLITSKAFHVESEGIPPA"
     gene            3017..3451
                     /locus_tag="VF991_21620"
     CDS             3017..3451
                     /locus_tag="VF991_21620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559108.1"
                     /translation="MRQALLGGLMLALAGCGAAQVAMAPPNQDVAGKQFNPPPAGMAA
                     IYFYNPVTTGPAINVREGPMFIGQLAPMTWMRIETTPGWHAMHCATSDSANWSSIRLA
                     PGEIGFVDVEMSPGSLVCSIQQTGPDAGRAGVLAGSRALQQR"
BASE COUNT          597 a         1136 c         1214 g          566 t
ORIGIN      
        1 tcaagctgct ggaagaccgg cgcaagaagc ttgcggccga gggcctgttc gacctcgaca
       61 ggaagcgcga gctgccgttc ctgcccgagg tgatcggcgt ggtgacctcg ccctcgggcg
      121 cggtgatccg cgacatcctg catcgcctgg ccgaccgctt cccctgccac gtgctggttt
      181 ggccggtcgc cgtgcagggc gagaaggcgg cgggcgaggt ggctgccgcc atcgcgggct
      241 tcaaccgcct gtccgtggaa ggggcggtgc cgcggccgga tatcctgatc gtggcgcgcg
      301 gcggcggcag cctggaagac ctctgggcct tcaacgagga gatcgtggtg cgcgccgccg
      361 cggcttcgac cattccgctg atctcggcgg tgggccatga gaccgacacc accctgatcg
      421 atttcgccgc cgaccgccgc gcaccgacgc cgacagccgc ggccgagatg gcggtgccgg
      481 tgcgcgccga cctgatcgcc cagacactcg atttcggcaa gcgcaccatg gcctgcatga
      541 accgcgtcct gcgcgaggcg acgctggcgg tgaccggctt ggcgcgcggg cttggcgatc
      601 cgctgcgcct gatcgaggaa cgccagcagc ggctcgatgt cagcggcgag cggctggcac
      661 tcgccacgcg ccagctcgtc gagcgccgcg gccatcaact ggcggcggcg cggcttgtcg
      721 gtccgcagcg ggtgatggac gcgaagcagc aattgctgga cagcgaagtc cgggcactga
      781 ggtcggcagg cgagcgcttt aaggccgaca cgctgcaaaa ggccgagcac atgctcgaac
      841 ggctcgagca atacggcgag cggctgaagc gccatggtgg cgacttgttg cagcagggcc
      901 ggcgccaggt cgaccagctc ggcaagcttc tggaaagcta ctccttccat tccgtgctga
      961 gccgcggctt tgccctggtg cgcgaccagg acggccatcc cgtgctggcg gcggccaaga
     1021 cccaggcggg cgacacgctc agcatcgaat tcgccgacgg ccgcatcggc gccaaggtga
     1081 ttgacggtgc aggaagcgca ccgcgtcccg ccgcggcgcc tcgccgccgc gacggcggca
     1141 gcggcaatca ggggtcgttg ttgtagagag ggagcatcat gaccaccgcg ccgctggctg
     1201 ccgagaccat caagaatttc ctgtatgcga gcacggccac cgtctccatg cagatgctga
     1261 agcgcggctt tcgtaatgcg gcggtgaacg gcgtgcggcc gctcaatccg aaagccacgc
     1321 gactggtcgg gccggcctat acgttgcgct acattcccgg acgcgaggat ctcgacaagc
     1381 cgccgacgcc caacgatccg ccgagcgccc aacgcgccgc catcgaggag acgccggccg
     1441 gctgcgtgct ggtgatcggc accgaaggca acacgcgatc cggcacgctg ggcgacatcc
     1501 tggcgctgcg gctcaaggtg cgcggcgtgg cgggcgtgct ctccgacggc gccatccgcg
     1561 acacgccggt catcggcaag ttcgactttc ccgtgttctg ctcggctgcc gccgcgccac
     1621 ccagcatgaa tcatcttcat ccggtggaag tgcagacgcc ggtcggcatc tgcggcgtgg
     1681 cagtctatcc cggcgacgtg atcgtggccg acgaggacgg cgccatcgtc gtgccgcgcc
     1741 atctcgccga cgaggtggcg cgcgattcct tcgagcagga gcggctggag aaattcgtcg
     1801 ccatccgtat cggccagggc aagccgatca cgggtaccta tccgcccaac gacgagacca
     1861 aggcgctcta tcaggcctgg atcaaggccg gcgagccgcc gaacggctag cgccgggccg
     1921 gaccgcgcgc ggcggatcga gatggtcgag cggcagaggc gccccggctt tcaccgtctg
     1981 gatggcgatg ttgctgcgca cttcccggac gatcggcagg tcgaggagct tgtcgaccag
     2041 gaaccgccgg tagttgtcga ggtcggggac gacgatttcc aggaaatagt cggcctcgcc
     2101 tgaaacgaga tgacaggcga cgacctcggg catggcggcg atggccttct cgaagccgag
     2161 cgcccgctgg ttggcgtggc cgtcgatctt gacgccgacg aatacggaaa agcccaggcc
     2221 gacacggtcg cgccgcagca cggcgcgata ggcctcgata tagccgtccc tctccaatcg
     2281 cttcacacgg cgcaggcaag gtgagggtga caagccgacc ctgccggcga ggtcgatatt
     2341 ggtgagcctg ccatcggctt gcagcgctga gacgatgcgg cggtcgatgg catccaggtc
     2401 aggttttggc ataagtgcgc atcctgcggt tcgagtgggg cacaacgttg cgaatgcctg
     2461 ccctggcttg gcgtatttcg caaggactcg cttcggtttc gtctgagatg gtgcgccgcg
     2521 caacaccaca gacgaggaat ttgccatggc ataccggtca gaggcgtccg tcgccgccat
     2581 cgacacgttg agaggcgcag taacgcgcta tttcgacctg atgtatgatt cggatatctt
     2641 gcgcttcgat caggtcttcc gatcgaccgc ccagcttcat ggcatgcgca acggtgagat
     2701 gcgggttctg acagccgagg cctatcgcga agcactggcc cgcacgccgt caccggcgtc
     2761 gcagaacgcg ccgcgcgagg aagaaattct cctgatcgac gtcacgtcca acagtcaggc
     2821 gctggtcaag gtgcgcgtca ggatcaaggc gatcgtctat gtcgactacc tcagctacca
     2881 tcacatcgat ggcgactggt tgatcacctc caaggccttc cacgtcgaaa gcgaaggcat
     2941 tccgccggcg tgatcgaggc ctttgtcgac gtcgttgtcg gtggcacact cggcggacga
     3001 cgaacggggg gattcgatgc gacaggcgct tttgggggga ctgatgctgg cgctcgccgg
     3061 ctgcggggcg gcccaggtgg cgatggcgcc gcccaaccag gacgtggctg gaaagcagtt
     3121 caacccgccg ccggccggca tggcggcgat ctatttctac aatcccgtaa ccaccggacc
     3181 ggccatcaac gtgagggaag gtccgatgtt catcggccaa ctggcgccga tgacctggat
     3241 gcggatcgaa accacgccgg gatggcatgc catgcactgc gccacgtctg actcggccaa
     3301 ctggtcgtcg atcaggctgg cgcccggcga gataggcttc gtcgatgtcg agatgtcgcc
     3361 cggctcgctg gtctgcagca tccagcagac cggcccggat gccggccggg ccggcgtgct
     3421 ggcgggcagc cgcgcgctgc agcagcggta gcgctcagcc gggcagctcg ccgtagggct
     3481 tggtgatcag ctcgagcagg tggccgttgg ggt
//
LOCUS       DASWGA010000940         6496 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2250682, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000940 DASWGA010000000
VERSION     DASWGA010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6496
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2250682"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1497
                     /gene="glgB"
                     /locus_tag="VF991_21625"
     CDS             <1..1497
                     /gene="glgB"
                     /locus_tag="VF991_21625"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011428582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HEX9559109.1"
                     /translation="DRWMAGRAARQSPTAPISIYEAHIGSWMRPADDRASIWDLAAER
                     LIPYLAELGFTHLELLPITEHPFGGSWGYQPLGLFAPSARYGPPESLARFVDALHAAN
                     IALLLDWVPAHFPTDAHGLARFDGTALYEHLDPREGFHRDWNTFIYNFGRREVQGFLI
                     ASALHWLERYHVDGLRVDAVASMLYRDYSRPADGWIPNVYGGRENLEAIGLLRHLNAV
                     VGERCPGAIVVAEESTAWPGVTAPVPDGLGFSFKWNMGWMHDTLRYMEHQPIHRAFHH
                     DDMTFGLLYAFSEKFILPISHDEVVYGKHSLLGKMPGDRWQRFANLRAYLGFMWAHPG
                     KKLLFMGSEIAQEREWNHDAEIDWPLLGDPAHAGVQRLVRDLNRLYGAEPALHVRDAR
                     ADGFRWLVGDDRANSVFAFLRLADEGSAPVLVVCNMTPVPRHGYSIGVPNAGRWREIA
                     NTDSRFYGGSDLGNDGEVHTLEQPAHGQPHSVQLMLPPLATVILRAAG"
     gene            1501..3609
                     /gene="glgX"
                     /locus_tag="VF991_21630"
     CDS             1501..3609
                     /gene="glgX"
                     /locus_tag="VF991_21630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HEX9559110.1"
                     /translation="MPTWPDRLLPGVPYPLGATWDGLGTNFAVFSAHAVKIELCLFDP
                     SGRREIARFELPEWTDEVWHGYLPNARTGLIYGYRAHGPYEPQRGHRFNHHKLLLDPY
                     ARRVAGELRMSDALFGYRVNSPRADLSFDRRDSAPGVMKAVVADDNFNWADDRPPAVP
                     WADTVIYEVHVRGLSMLRHELRPNERGTFAALGEPWFIDHLRRLGVTTVELLPVHAFV
                     QDRPLLQKGLRNYWGYNSLGFFAPEPRYLSDNTADEMRIAIRQLHAAGLEVILDVVYN
                     HTGEGSEMGPTLCFRGLDNASYYRLVADNPRHCVNDTGTGNTLNLSTPRVLQMVMDSL
                     RYWVTAFRVDGFRFDLGVALGREAHGFDPHSGFFDAIRQDPVLARVKLIAEPWDVGPG
                     GYQLGQHPPGFAEWNDRFRDGVRRYWRGDAGQRADFAVRLAGSSDLFDKQARRPWASI
                     NYVASHDGFTLADVVSYAERHNEANGEGNNDGHAENYSANWGVEGPTDDPAILDARRR
                     LQRAFLATLFLAQGTPMLLGGDEFGRTQRGNNNAYCQDNEISWLDWRLADSPDGRVLT
                     TFVQRMIALRHRHAVLRAPRFLHGQDELAPDIRDIAWFDAEGVPVSNGSWNNPEERRL
                     VLRRAGRNGDGKVSILTAFFNAGAEEQRFRLPPPGRPARLLVDSAAPDAPEREFEGEE
                     IVVGARSVVLILSTRKDDGG"
     gene            3606..5372
                     /gene="treZ"
                     /locus_tag="VF991_21635"
     CDS             3606..5372
                     /gene="treZ"
                     /locus_tag="VF991_21635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HEX9559111.1"
                     /translation="MTSFARDLPFGASLIAPDRTRFRLWAPACQAVAVEIDDRVPMPM
                     QRSPEGWFEAEVRCGMETRYRYRLDDGLAVPDPASRAQDDDVHDPSVVVDPRAYRWQH
                     PGWRGRKWRETVLYELHVGALGGFADVRAALPGLAELGITAVELMPINDFPGQRYWGY
                     DGVLPFAPDRAYGTPDELKALVDAAHSSGLMIFLDVVYNHFGPDGNYLARYAPGFFRN
                     DIATPWGAAIDFRRAEVRRFFTENALYWLMEYRFDGLRLDAVHAISEADWLDDMAAEV
                     RATVEPGRHVHLVLEHDGNAAEHLRRRFDAQWNDDAHHVLHVLLTGERDGYYADYAER
                     PADKLARCLAEGFIYQGEPSAYRKGRRRGSPSTDLPPTAFVFFLQNHDQIGNRPFGDR
                     LVDRVDPATLEAAIALQLLCPQIPLIFMGEEDASRTPFLYFTDHHGDLGKAVREGRRR
                     EFAAFAGFQEGETAQAIPDPNVLQTFDSSRPVTGGRRGAGRRALYKKLLGLRTAALMP
                     RLTGARAIAARSVGPAAVMVRWRLEDGAVFSLVSNLGGELCPIEQPAGDLLFESRAGA
                     GKEMRRGRLQGPVTAAFLEAPG"
     gene            5369..>6496
                     /locus_tag="VF991_21640"
     CDS             5369..>6496
                     /locus_tag="VF991_21640"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF014499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEX9559112.1"
                     /translation="MNEEAIRAHARQVGIAVDWIDATGRPQRVRTESLRRLLEALHDA
                     DDGPDLPPLITARLNARTSLPNLSLEADIPAELALEDGNVRRLTLRSGKGASVPAIAQ
                     PGYHRLRFADREITLAVAPARCLTLDDIGAGRRMWGVAAQIYGLRRSGDGGIGDAGAV
                     RDLAEAAARRGADAVALSPLHSLFPADPSRYSPYSPSSRLFLNPLYADPSATFTADRI
                     AACTPSGRQALEGAPSIDWAAAAAAKFAVLRCLFDDFANRDLAAGSVLAADFERFVRE
                     GGEALREHALFDALHDERPGNWTEWPAGWRQPRDAAAVRYHLFLQWLTARSFAAAQTA
                     ARAAGMRIGLIGDLAIGMDRSGSHAWARQSDLLLGLAIGAPP"
BASE COUNT          963 a         2294 c         2152 g         1087 t
ORIGIN      
        1 gatcgctgga tggcagggcg tgccgcgcgg caatcgccga ccgcgccgat ttccatctac
       61 gaggcccata tcggatcatg gatgcgaccg gccgacgatc gcgcctcgat ctgggatctc
      121 gccgccgaac gactcattcc ctatctcgcc gagctcggct tcacccacct cgagctgctg
      181 ccgatcaccg agcacccgtt cggcggctcg tggggttacc agccgctcgg cctgttcgcc
      241 ccgagcgctc gctatggtcc gccggagtcc ttggcccgct tcgtcgacgc gctgcacgcg
      301 gcgaatatcg ctctcctgct cgactgggtg ccggcgcact ttccgaccga tgcgcatggc
      361 ctcgcgcgct tcgatggcac ggccctttac gagcatctcg atccgcgcga gggcttccat
      421 cgcgactgga acaccttcat ctacaatttc ggccggcgcg aagttcaggg gttcctgatt
      481 gccagcgcgt tgcactggct ggagcgctat cacgtcgacg gcctgcgggt cgatgccgtg
      541 gcctccatgc tctaccgcga ttacagccgg cccgccgatg gttggatccc caacgtctat
      601 ggcggccgcg agaacctcga ggccatcggc ttgctgcgcc acctcaatgc ggtggtcggc
      661 gagcgctgcc ccggcgccat cgtcgtcgcc gaggaatcga ccgcctggcc cggcgtgacg
      721 gcacccgtgc cggacgggct gggcttctcc ttcaagtgga acatgggctg gatgcacgac
      781 actttacgct acatggaaca ccagccgatc catcgtgcct tccaccacga cgacatgacc
      841 ttcggcctgc tctacgcgtt ctccgagaaa ttcatcctgc cgatctcgca cgacgaggtc
      901 gtctacggca aacactcgct gctcggcaag atgccgggcg accgctggca gcgcttcgcc
      961 aatctgcgtg cctatctcgg tttcatgtgg gcccatcccg gcaagaagct gttgttcatg
     1021 ggcagcgaga tcgcccagga gcgcgaatgg aaccatgacg ccgagatcga ctggccgctg
     1081 ctcggcgatc ccgcccatgc cggcgtgcag cgcctggtgc gcgatctcaa ccggctctat
     1141 ggcgccgaac ccgcgctgca tgtacgcgat gcccgcgccg acggctttcg ctggctggtc
     1201 ggcgacgacc gcgccaactc ggtcttcgcc ttcctgcgct tggccgacga gggcagcgcg
     1261 ccggtccttg tcgtctgcaa catgaccccg gtgccgcggc acggctattc gatcggcgtg
     1321 ccgaatgccg gccgctggcg cgagatcgcc aataccgatt cgcgtttcta tggcggcagc
     1381 gatctcggca atgacggcga agtccacacg ctcgagcaac ccgcgcacgg ccagcctcat
     1441 agcgtgcagc tcatgctgcc accgctggcg acggtgatac tgcgcgccgc aggctaaagc
     1501 atgccgacct ggcccgatcg cctgctgccc ggcgtgccct atccgctggg cgccacctgg
     1561 gatggtcttg gcaccaactt cgcggtgttc tccgcgcacg ccgtcaagat cgaactttgc
     1621 ctgttcgatc cgtcgggccg gcgcgagatc gcccgtttcg aactgccgga atggaccgac
     1681 gaggtctggc atggctatct gcccaatgcg cgcaccggac tgatctacgg ctatcgcgcg
     1741 cacggccctt acgagccgca gcgcggccac cgcttcaacc atcacaagct gctgctcgat
     1801 ccctatgccc gccgcgtcgc cggcgagttg cgcatgtcgg acgcgctgtt cggctatcgc
     1861 gtgaattcgc cgcgcgccga cctgtccttc gaccggcgcg acagcgcgcc gggcgtgatg
     1921 aaggcggtgg tggctgacga caacttcaac tgggccgacg accggccgcc cgccgtgccg
     1981 tgggccgaca cggtgatcta cgaagtccat gtgcgcggtc tcagcatgct gcgccacgag
     2041 ttgcggccca acgagcgcgg cacttttgcc gcgctcggcg agccgtggtt catcgatcac
     2101 ctgaggcggc tcggcgtgac caccgtggaa ctgctgccgg tccacgcctt cgtacaggac
     2161 cgccccctgc tgcagaaggg cctgcgcaac tactggggct acaacagcct cggcttcttc
     2221 gcgcccgagc cacgctatct ctcggacaac accgccgacg agatgcgtat cgccatccgc
     2281 caactgcatg ccgccggcct cgaggtgatc ctcgacgtcg tctacaacca caccggcgag
     2341 ggcagcgaga tgggcccgac cctgtgcttt cgcggcctcg acaatgccag ctactaccgg
     2401 ctggtcgccg acaatccgcg ccattgcgtc aacgacaccg gcaccggcaa cacgctgaac
     2461 ctgtcgacgc cgcgcgtgtt gcagatggtg atggattccc tgcgctactg ggtgaccgcc
     2521 tttcgcgtcg acggctttcg cttcgatctc ggcgtggctc tcggccgcga ggcgcacggc
     2581 ttcgaccccc attcgggctt cttcgacgcc atccgccagg atccggtgct ggcgcgggtc
     2641 aagctgatcg ccgagccgtg ggacgtcggc ccgggaggct accagctcgg ccagcatccg
     2701 ccgggcttcg ccgaatggaa cgaccgcttt cgcgacggcg tgcgccgcta ttggcgcggc
     2761 gatgccggtc agcgtgccga tttcgccgtc cgcctggccg gctcgagcga cctgttcgac
     2821 aagcaggcgc gccggccgtg ggcctcgatc aactacgttg ccagccacga cggcttcacg
     2881 ctggccgacg tggtgagcta tgccgagcgc cacaacgagg ccaacggtga gggcaacaat
     2941 gacggccacg ccgaaaacta ttcggccaac tggggcgtcg aggggccgac cgacgatccg
     3001 gcgatcctcg acgcgagacg gcgcctgcag cgcgcgttcc tcgccaccct gttcctggcg
     3061 cagggcacgc ccatgctgct gggcggcgac gaattcggcc gcacccagcg cggcaacaac
     3121 aacgcctact gccaggacaa cgagatctcg tggctcgact ggcggctggc cgacagcccc
     3181 gacggccgcg tgctcacgac cttcgtgcaa cggatgatcg cgctgcgcca ccgccacgcc
     3241 gtgctgcgtg cgccgcgctt cctgcacggc caggatgagc tggcgcccga tatccgcgac
     3301 atcgcctggt tcgatgccga gggcgtgccg gtctccaacg ggtcctggaa caatccggag
     3361 gagcggcgct tggtgctgcg gcgcgccggc cgcaacggcg acggcaaggt gtcgatcctg
     3421 acggcattct tcaatgccgg cgccgaggaa cagcgctttc gcctgccgcc gcccggccgg
     3481 ccggcgcgct tgctggtcga cagcgcggcg cccgacgcgc ccgagcgcga gttcgagggc
     3541 gaggagatcg tggtcggcgc gcgcagcgtc gtgctgatcc tgagcacgcg caaggacgac
     3601 ggcgggtgac cagcttcgcc cgcgacctgc cgttcggcgc cagcctgatc gcgcccgacc
     3661 gcacgcgctt tcggctgtgg gcgccggctt gccaagcggt tgccgtggag atcgacgacc
     3721 gggtgcctat gccgatgcag cgatctccgg aaggctggtt cgaggccgag gtgcgctgtg
     3781 gaatggagac gcgttatcgc tatcggctgg acgacggtct tgccgtgccg gatccggcgt
     3841 cgcgcgccca ggacgacgat gttcatgacc cgagcgtggt cgtcgatccg cgcgcttatc
     3901 gctggcagca tcccggctgg cgcggacgga aatggcgcga gaccgtcttg tacgagctgc
     3961 atgtcggcgc cttgggcggc tttgccgacg tgcgggccgc cttgccgggc cttgccgagc
     4021 tcgggatcac cgccgtcgag ttgatgccga tcaacgattt tccgggccag cgctactggg
     4081 gctatgacgg cgtgctgccc ttcgcccccg accgcgccta cggcacgccc gacgagctga
     4141 aggcgctggt cgacgccgcc cattcaagcg gcctgatgat ctttctcgac gtggtctaca
     4201 atcacttcgg gccggacggg aactatctcg cgcgctacgc gccgggcttc ttccgcaacg
     4261 acatcgccac gccgtggggg gcggcgatcg atttccggcg cgccgaagtc cgccgcttct
     4321 tcaccgagaa cgcgctctat tggctgatgg aataccgctt cgacggactg cgcctggacg
     4381 ccgtgcatgc gatctccgaa gccgattggc tggacgacat ggcggccgag gtgcgggcca
     4441 cggtcgagcc tggccggcac gtccatctcg tgctcgagca tgacggcaat gcggccgagc
     4501 atctgcgccg ccggttcgat gcgcagtgga acgacgatgc gcatcatgtc ctgcatgtcc
     4561 tgctgaccgg cgagcgcgac ggctactacg ccgactatgc cgagcggccg gccgacaagc
     4621 tggcacgctg cctggccgaa ggcttcattt accagggtga accctcggcc tatcgcaaag
     4681 gccggcggcg cggctcgccc agcaccgatc tgccgccgac cgccttcgtg ttcttcctgc
     4741 agaaccacga ccagatcggc aaccggccgt tcggcgaccg gctggtcgac agggtcgatc
     4801 ccgcaacgct ggaggccgcc atcgccctcc agcttctctg tccacagatc cccctgatct
     4861 tcatgggcga ggaggatgcc agccgcacgc ccttccttta cttcaccgac catcacggcg
     4921 acctgggaaa agccgtgcgc gagggcaggc ggcgcgagtt cgccgccttc gcgggcttcc
     4981 aagagggcga gacggctcag gcgattcccg atcccaatgt cctgcagaca ttcgactcca
     5041 gccggccggt gacgggcggc aggcgcggcg ccgggcggcg cgcgctctac aagaaattgc
     5101 tgggattgcg gacggcggcc ctgatgccgc gtctgacggg cgcccgggcg attgcggcga
     5161 gatcggtcgg accggccgcc gtcatggtgc gctggcgcct ggaggatggc gccgtgttca
     5221 gcctcgtcag caatctcggc ggagagcttt gccccatcga gcagcctgcc ggtgacctgt
     5281 tgttcgaatc gcgcgccggc gccggcaagg agatgcgacg gggccgcctg caagggccgg
     5341 tgacggcggc cttccttgag gcgccgggat gaatgaagag gcgattcgcg cccatgcgcg
     5401 ccaagtgggg atcgccgtcg actggatcga tgcgacgggc cgcccccagc gcgtcaggac
     5461 ggaatcgctt cgccgcctgc tcgaggctct gcacgacgcc gacgatgggc cggacttgcc
     5521 gccgctcatc acggcgcgac tcaatgcgcg cacgagcctg ccgaacctgt cgctcgaggc
     5581 cgacattccg gccgagttgg cgctggaaga cggcaatgtc cgccgcctga cgttgcgcag
     5641 cggcaagggc gcgagcgtcc ccgccatcgc gcagccgggc taccaccgcc tgcgctttgc
     5701 cgaccgcgag atcacgctcg cggtggcgcc ggcgcgctgc ctcacgctcg acgacatcgg
     5761 cgccggtcgc cggatgtggg gtgtggccgc gcagatctat ggcttgcgcc gcagcggcga
     5821 cggcggcatc ggcgacgcag gcgccgtgcg cgatcttgcc gaagcggcgg cccgtcgagg
     5881 cgccgatgcg gttgcgctca gcccgctgca cagcctgttt ccggccgacc cgtcacgata
     5941 tagcccctat tcgccatcga gccggctgtt tctcaatccg ctgtacgccg atccgtccgc
     6001 cacctttacg gccgaccgaa tcgccgcctg cacgccgagc gggcgccagg cattggaagg
     6061 cgcgccttcg atcgactggg cggctgcggc agcggcgaag ttcgccgtgt tgcgttgcct
     6121 gttcgacgat ttcgccaatc gcgacctcgc cgccggcagc gtgctcgcgg ccgacttcga
     6181 gcgtttcgtg cgtgaaggcg gcgaggcctt gcgcgagcat gcgctgttcg acgcgctgca
     6241 tgacgagcgg ccgggcaact ggacggaatg gcccgccggg tggcgccagc cgcgcgatgc
     6301 cgccgcggtg cgctaccacc tctttctgca atggctgacg gcgcgctcct tcgccgccgc
     6361 gcaaacggcg gcccgcgccg cgggcatgcg gatcggcctg atcggcgatc tggcgatcgg
     6421 catggaccgt tcgggcagcc atgcgtgggc gcggcagtcc gacctgctgc tggggctcgc
     6481 catcggcgcg ccgccc
//
LOCUS       DASWGA010000941         2130 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1761895, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000941 DASWGA010000000
VERSION     DASWGA010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1761895"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..814)
                     /locus_tag="VF991_21645"
     CDS             complement(<1..814)
                     /locus_tag="VF991_21645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559113.1"
                     /translation="MNTRRALAFIFCTVTLDVLALGVMIPVLPTLVLGFMGGDTASAA
                     EMFGLFATAWGLMQFLCSPLLGALSDRYGRRPVILISCLGLGLDYIFMAIAPSLTLLF
                     VGRIISGITAATISTAFAYIADVTPPDGRAKAFGLVGMAFGLGFVVGPALGGLLGGLD
                     PRLPFWLSAAACLANAAFGWFVLPESLPPERRMAFAWKRANPVGSLNLLRSQRPLLGL
                     AAIDFIVNVAHQVLPSVFVLYAGYRYGWSETTVGLTLAFVGFCAALVQGLVVG"
     gene            complement(842..918)
                     /locus_tag="VF991_21650"
     tRNA            complement(842..918)
                     /locus_tag="VF991_21650"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(882..884),aa:Pro,seq:ggg)
     gene            1021..>2130
                     /locus_tag="VF991_21655"
     CDS             1021..>2130
                     /locus_tag="VF991_21655"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559114.1"
                     /translation="MDAAAALARRVLVFSSIGHALMHLMTAFYAVIVLTLAVAWDLPP
                     ESLLELYAPAAILLGVMSLPAGWASDRFGAPLMMMVMFAGLGLSSIACGLVAERDTLS
                     LMLALCGLGIFGAIYHSAGIGWIIRTAREQGHAMGVNGLWGSAGLALYGVVPGVLITL
                     ASWRAAFIVPGIVCLGVGAALAWQIRQGRVGDRPMPRTPGVQTGRREFWRVFSVLSVT
                     MALEGILWQAVMFGAAMVFEARLADDISRLREGLASWGVATQAVLWVGLATSMIYVVS
                     GIAQYAMGRTIIDRYSLKSTYVVASALQVGAMAALAMGNGYVALAGAIASAVLSSATG
                     PVENILIARYTPGRYHGLGFGAKFVVAFGASPLAIL"
BASE COUNT          343 a          716 c          745 g          326 t
ORIGIN      
        1 ggccgaccac cagaccctgc acgagagcgg cacagaagcc gacgaaggcg agcgtcaggc
       61 cgaccgtcgt ctcgctccag ccatagcgat agccggcata gagcacgaac accgaaggca
      121 acacctgatg ggcgacgttg acgatgaagt cgatggcggc caggcccagc aacgggcgct
      181 gcgagcgcag gagattgagc gaacccacgg ggttggcgcg cttccaggcg aatgccatgc
      241 ggcgctccgg cggcagcgat tcgggcagca cgaaccagcc gaacgcggca ttggccaggc
      301 aggccgcggc cgacagccag aacggcagac gcggatcgag cccacccagc aggccgccaa
      361 gcgccgggcc gaccacgaag cccagaccga aggccatgcc gaccaggccg aatgccttgg
      421 cgcggccgtc gggcggtgtc acatcggcga tgtaggcgaa ggcggtgctg atcgtggccg
      481 ccgtgatgcc ggagatgatg cgacccacga acaagagcgt gagcgagggc gcgatcgcca
      541 tgaagatgta gtcgaggcca agaccgagac aggaaatcag gatcaccggc cggcgcccgt
      601 agcggtccga cagcgcgccc aggagtggcg agcagaggaa ctgcatcaga ccccacgccg
      661 tggcgaacaa gccgaacatc tcggccgcgc tcgccgtgtc gccgcccatg aagcccagca
      721 caagagtcgg cagcaccggg atcatcaccc ccagcgccag tacgtcgagc gtcaccgtgc
      781 agaagatgaa ggcaagcgcg cgccgggtgt tcattgcgac gtcatttggg gtgggaagaa
      841 atggtcgggg cgacaggatt tgaacctgcg acccccagtc ccccagactg atgcgctacc
      901 aggctgcgct acgccccgac cggatgccgc ggcacgccgc agcagggggg ctttagcgcg
      961 aatggcagcg atgccgcaag ccggcttgca cgccagtcgg cgaggaccga tacaggcgcc
     1021 atggatgccg ctgccgcctt ggcccgccgg gtcttggtct tttcctcgat cggccacgcg
     1081 ctgatgcact tgatgaccgc cttctacgcg gtgatcgtgc tgacgctggc cgtcgcctgg
     1141 gacctgccgc ccgaaagcct gctcgagctc tatgcgccgg cggcgatcct gctcggcgtc
     1201 atgtcgctgc cggccggctg ggcgtcggac cgcttcggcg cgcccttgat gatgatggtg
     1261 atgttcgcgg ggctcggcct gtcgtcgatc gcctgcggcc tggtcgccga acgcgacacg
     1321 ctttcgctca tgctggcgct ctgcgggctc ggcattttcg gcgccatcta ccactcggcc
     1381 ggcatcggct ggatcatccg caccgcgcgc gagcagggcc acgccatggg cgtgaacggc
     1441 ctttggggca gcgcgggcct tgctctttac ggcgtcgtgc cgggcgtgct gatcacgctc
     1501 gcctcgtggc gcgcggcctt catcgtgccg ggcatcgtct gccttggcgt cggcgcggcg
     1561 ctcgcctggc agatcaggca gggccgggtc ggcgacaggc caatgccgcg gacgcccggc
     1621 gtgcagactg gccgccgcga gttctggcgc gtcttctccg tgctctcggt caccatggcg
     1681 ctcgaaggca ttctctggca ggcggtgatg ttcggcgcgg cgatggtgtt cgaggccagg
     1741 ctggccgacg acatctcccg cctgcgcgag gggcttgcct catggggcgt ggcgacccag
     1801 gccgtgctgt gggtcgggct cgcgacgtcg atgatctacg tggtgtcggg catcgcgcag
     1861 tacgccatgg gccgcaccat catcgatcgc tattcgctga aatcgaccta tgtcgtggcc
     1921 tccgcgctgc aggtcggcgc gatggcagcg ctggccatgg gcaacggcta cgtggcgctc
     1981 gccggtgcca tcgcttcggc ggtgctgagc tcggcgaccg gaccggtcga gaacatcctg
     2041 atcgcccgct acacgcccgg ccgctatcac ggtctgggct tcggcgcgaa gttcgtcgtc
     2101 gccttcggcg cgagcccgct cgccatcctc
//
LOCUS       DASWGA010000942         2641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2016099, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000942 DASWGA010000000
VERSION     DASWGA010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2641
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2016099"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VF991_21660"
     CDS             complement(<1..268)
                     /locus_tag="VF991_21660"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008594040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9559115.1"
                     /translation="MIRRRLLAVALLLGAFRAEACLAAPQSMVAAANPLAVEAGLDVL
                     RRGGSAVDAAIAVQMVLGVVEPQASGIGGGGFLLHYDAASGATAV"
     gene            complement(265..1068)
                     /locus_tag="VF991_21665"
     CDS             complement(265..1068)
                     /locus_tag="VF991_21665"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX9559116.1"
                     /translation="MNELKSPTWDANLYLKFVDHRLRPALDLMGRLDPANGGRPGHAI
                     YDLGCGAGNITRILAERFAKVPVVGIDSSDEMLAKARAQIGDERVTFSKGDLAHFKPG
                     LPPSILYSNAAYQWVENHIDYFPGLLKLLPSGGQLAIQMPRNHEAPSHALMKKAAEAG
                     PWRDKLAKVGGIRSVYEPARYYDVLKPSCSDLEVWESIYQQPLTGKDPVAQYTAGTGL
                     RPYMEVLDEQERTGFYDTYAGLLAEAYPMRADGITLFPFRRLFIVARRA"
     gene            complement(1071..1502)
                     /locus_tag="VF991_21670"
     CDS             complement(1071..1502)
                     /locus_tag="VF991_21670"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX9559117.1"
                     /translation="MAKLIEYKDMSPRAKAVVEGIAQARGIDPADINNVWKALARHSS
                     VMERFAAEMKAVFAPGKLASSGASRHLPHEVGEAGRGNLAVSIANQCDYCTASHGAMA
                     RRKGMTEEMYEEFRAVVLAAQMGNKIATGYRVPVDAAFEEK"
     gene            complement(1567..2292)
                     /gene="phbB"
                     /locus_tag="VF991_21675"
     CDS             complement(1567..2292)
                     /gene="phbB"
                     /locus_tag="VF991_21675"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018454 - acetoacetyl-CoA reductase
                     activity [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HEX9559118.1"
                     /translation="MAGRVAVVTGGTRGIGAAVSRMLKDKGYKVAATYAGNDDAAKKF
                     KAETGIAVYKFDVGDFAACQTVISQIENDLGPIEVLVNNAGITRDSTMRKLTRDMWDS
                     VIDTNLGSCFNMSKAVWEGMNERGFGRIVNIGSINGQGGQYGQVNYAAAKSGIHGFTK
                     ALAQEGASKGITVNAIAPGYTETDMVSAVPPHVLEKIVAKIPVGRLGKADEIARGVMF
                     LIADDAGFITGSTLSINGGQHMY"
     gene            2417..>2641
                     /locus_tag="VF991_21680"
     CDS             2417..>2641
                     /locus_tag="VF991_21680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559119.1"
                     /translation="MKPFTALFGAAAGTHAADQLALATLPLTATLVLGAGPDVLGLLV
                     AAQSAAWLLISLPAGAWIDRMPRRTLLIVGL"
BASE COUNT          436 a          876 c          866 g          463 t
ORIGIN      
        1 aaacggcggt ggcacccgag gcggcgtcgt agtgcagcag gaagccgccg ccgccgatgc
       61 ccgaagcctg cggctcgacg acgcccagca ccatctgcac ggcgatcgcg gcatcgaccg
      121 ccgatccacc acgccgcagg acatccaatc cagcctcgac cgccagtgga ttggccgccg
      181 ccaccatgct ctgcggcgcc gcaaggcagg cctcggcccg aaaggcgccg agcagcagcg
      241 cgacggcgag caggcggcga cggatcatgc gcgccgggcc acgatgaaca ggcggcggaa
      301 gggaaagagc gtgatgccgt cggcgcgcat cggataggcc tcggccagca gcccagcgta
      361 ggtatcgtaa aagccggtgc gctcctgctc gtccagcact tccatgtacg gcctgaggcc
      421 agtgcccgcg gtgtattgcg ccaccggatc cttgccagtg agcggctgct ggtaaatcga
      481 ttcccagact tcgaggtccg agcacgaggg cttcagcacg tcgtagtagc gtgcgggctc
      541 gtacaccgag cggatgccgc cgaccttggc gagcttgtcg cgccacgggc ccgcctcggc
      601 agccttcttc atcagcgcat gcgacggtgc ctcatggttg cgcggcatct ggatcgcaag
      661 ctggccgccc gacggcagaa gtttcagcag gccgggaaaa tagtcgatgt ggttttcgac
      721 ccactgatag gcggcgttgc tgtagaggat cgacggcggc aggccgggct tgaagtgggc
      781 gagatcgccc ttgctgaagg tcacgcgctc gtcgccgatc tgggcgcgcg ccttggccag
      841 catctcgtca gacgaatcga taccgacgac cggcaccttg gcaaaacgct cggccaggat
      901 gcgcgtgatg ttgccggcgc cgcagccgag atcgtagatc gcgtggcccg gccgaccgcc
      961 gttggcggga tcgagccggc ccatgagatc gagcgcgggc ctcaggcgat gatcgacgaa
     1021 cttgaggtag agattggcat cccaggtcgg ggatttcagc tcgttcacgg tcacttctcc
     1081 tcgaacgcgg cgtcgacggg cacgcgatag ccggtggcga tcttgttgcc catctgcgcc
     1141 gccagcacca cggccctgaa ctcctcgtac atctcctcgg tcatgccctt gcggcgcgcc
     1201 atggcgccgt gcgaggccgt gcaatagtcg cactgattgg cgatgctgac cgcgagattc
     1261 cccctcccgg cctcccccac ttcgtggggg aggtggcgcg aagcgccgga ggaggcgagc
     1321 ttgcccgggg cgaagactgc cttcatctcc gccgcgaaac gctccatcac cgacgaatgg
     1381 cgcgccaggg ccttccagac attgttgatg tcggcgggat cgatgccgcg ggcctgggcg
     1441 atgccctcga cgacggcctt cgcgcgcggg ctcatgtcct tgtattcgat cagcttggcc
     1501 atggtctctc ctgcaaacga caagggccgg cgcagggccg gccctcatca tggcgcatcc
     1561 gagcccttag tacatatgct ggccgccatt gatcgacagc gtcgagccgg tgatgaaacc
     1621 ggcatcgtcg gcgatcagga acatcacgcc gcgggcgatt tcatcggcct tgccgagccg
     1681 gccgaccggg atcttggcga cgatcttctc cagcacgtgg ggcggcaccg ccgagaccat
     1741 atcggtctcg gtgtagccgg gcgcgatggc gttcacggtg atgcccttgg acgcgccttc
     1801 ctgggccagt gccttggtga agccgtgaat gcccgacttg gcggcggcgt agttgacctg
     1861 gccgtactgg ccgccctggc cgttgatcga accgatattg acgatacggc cgaagccgcg
     1921 ctcgttcatg ccctcccaca ccgccttgga catgttgaag caggagccga gattggtgtc
     1981 gatcacggag tcccacatgt cgcgcgtcag cttgcgcatg gtcgaatcac gggtgatgcc
     2041 ggcgttgttc accagcactt cgatcggacc gagatcgttc tcgatctggg agatgaccgt
     2101 ttgacaggcg gcgaaatcgc cgacgtcgaa cttgtagacg gcgatgccgg tctccgcctt
     2161 gaacttcttc gccgcgtcat cgttgccggc gtaggtggcc gccaccttgt agcctttgtc
     2221 cttcagcatg cgcgaaacag cggcgccgat gccgcgcgtt ccgcccgtca cgactgcaac
     2281 acgtcccgcc attttttcct cccttacgtt acgccgacat actctagccg gttctgcggg
     2341 gtcgcgggca agagagacga attggtgggc ggcggcggat aacggtgagc ccgacgccgg
     2401 tcatagaacg gcaaccatga agcccttcac cgccctgttc ggcgctgccg ccggaaccca
     2461 cgccgccgac caactggcgc tcgcaaccct gccgctgacc gcgaccctgg ttctgggcgc
     2521 gggacctgac gtgctcggcc tgctggtcgc cgcacaaagt gcagcctggc tgctgatctc
     2581 gctgccggcc ggtgcttgga tcgatcgcat gccgcgccgc accctgctga tcgtggggct
     2641 g
//
LOCUS       DASWGA010000943         6037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2016136, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000943 DASWGA010000000
VERSION     DASWGA010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6037
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2016136"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..1501)
                     /locus_tag="VF991_21685"
     CDS             complement(86..1501)
                     /locus_tag="VF991_21685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9559120.1"
                     /translation="MINDDLALRDLSEIADAIAAGRITSVQATEACLARIKVWQPRIN
                     AFLRLHREKALEQARAMDKELAAGRRRGPLHGVPMAHKDMYYRKGEISTGGSEIRRDW
                     VAPVTATVLRKLDAAGVVELGFLNMAEFAAGPTGHNVHHGHCRNPWDQTRVTGGSSSG
                     SGASVAARLVYGALGSDTGGSIRLPAAACGVVGMKATYGRVSRAGAVARSWSLDHVGP
                     LTRTVRDNARMLGIVAGHDPDDSTTSEKPVPDYEALLEGGVSGLRIGLALPDALEPID
                     TQVGSAVQAAADTLAKLGAKIAPAKLPDFTTLYRAAEVIVKCEAAAMHRPWMEADAPY
                     ANQVRTRMEAGFFIPATQYIDALRLRAHFVREFLETAMEDIDAVLLPAIPFPIPTLEE
                     TDVEKSGGPATLSMVARFTGLTRPFNTLGLPAFSVPGGFDSNGAPIGLQLVGRPFDEA
                     LLYRIGHAYQSATDHHRKAPA"
     gene            complement(1498..1695)
                     /locus_tag="VF991_21690"
     CDS             complement(1498..1695)
                     /locus_tag="VF991_21690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559121.1"
                     /translation="MDDKTRLAAGIARHLQGLDYDDKRLAEIAAEVEVLNDAVRKAAA
                     ARLTFDDEPAAFASVIAREAK"
     gene            complement(1705..2607)
                     /locus_tag="VF991_21695"
     CDS             complement(1705..2607)
                     /locus_tag="VF991_21695"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX9559122.1"
                     /translation="MSSPGLIPTFSTAVNTWQCDENDHLNVQFYTEFGHEASAHLLAG
                     LGLGPRAQRAARLEPCVAWDHVRYLREFRAVDPVEVLSAPVEVGERHLVAYHEIRNSF
                     DGTVAATLRRRIDSDRPWPPSFREHAEAAQVSLPDHARPRSVGRLALPELALGEARRV
                     GLVDVGRTVITPAECDEHGTFLPHHQFGRYSDGAPVLWNHLGFDRAAMQERQEGSVIV
                     EMLNHYRRPLHAGDLLVVMSGLASFTDRVLSFTHFLFEAETGTLAACAEAVGMKFDQK
                     ARKIMTFTAEDQARLGKRKLRLAA"
     gene            2795..3103
                     /locus_tag="VF991_21700"
     CDS             2795..3103
                     /locus_tag="VF991_21700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX9559123.1"
                     /translation="MATAPTTKPTVPTVPLSKVAAELAEKTGMTKKDATGALDDFVGL
                     IVKHLKKGNKVRITGLGILQVRNRPARMGRNPATGEAIKIKASKKVAFRVAKDLKEAI
                     "
     gene            3212..4012
                     /locus_tag="VF991_21705"
     CDS             3212..4012
                     /locus_tag="VF991_21705"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEX9559124.1"
                     /translation="MTSFIILKILAQLASPMGILVAGLVAGAVLTLLRLRRLGRLVAA
                     LAIAQLIIFSFSAVADALLGPLEDMARSEAAAAPVCCYEAIVVLGGSIGPAVPPLRPD
                     PKLSDSSDRVWHAARLFHRGVAPRIIVSGGSYAVQTGEAPPSQTEAMAMRQFLLALGV
                     PDDRIVMEGKSLNTIENMRETRALVGAAPVALVTSAYHMPRALRLARRAGLNAGAFPT
                     DWHVLPGTSPWWESLWPSVGALTASGVALREYLALAFDNRSVNVKTEP"
     gene            4009..5046
                     /locus_tag="VF991_21710"
     CDS             4009..5046
                     /locus_tag="VF991_21710"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559125.1"
                     /translation="MTRTAYGLDRRSALRAAAGFALAAPLLVPLARRPRAQSLDKLSF
                     HTDWRAQAEHGGYYQAIAAGLYRQAGIECDLRQGGPSLNISQLLLGGRVDMTMTNSFE
                     AFAFVREDAPFYIIAAIFQKDPQVLIGHPDTGLDGFEKLHGRTLLIGGGGRITYWPYL
                     RRKYGLSDSQLRPYNFNMAPFLADKNAIQQGFLSSEPFSIAQALGRPPAVLLIADAGF
                     SAYQNAIAISRKMASEKRDLVQRFVDASLNGWAQYLKGGPEIAAANALIKQANPEQTD
                     DRIAYAIKVMNERGIVLSGDALQNGIGAMTDRRWRNFYDSMVEVDVLPKGVDVARAYT
                     LEFVNKGIGKA"
     gene            5056..>6037
                     /locus_tag="VF991_21715"
     CDS             5056..>6037
                     /locus_tag="VF991_21715"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9559126.1"
                     /translation="MYKVSEEHTMLRDLVKKFVRNELMPLEKNILDRFAAGQPAALSD
                     EENAKLFKQCKELGLWALDVPEEVGGANLPAVALVGVNEELGYTSVPFTFPPDSPNLH
                     MLLATANPEQRKKYLEPYAAGETISAIAISEPGAGGDPAGMKTKAVKDGGDWVINGRK
                     IWISRIAKADFTIVMAVTDSNLGARGGITAFLVDKGTKGLVVARAIPMLAGQRTYEVV
                     FEDCRVPETQVLGRIGAGFAPMQLRLTVRRLQMGAWCIGMTQRALDMLVEHANQRVTF
                     GQKLADRQAIQWWVADAATKLHACRLMVMDAAVKQDEGRDVRMEASMIKVF"
BASE COUNT         1014 a         2005 c         2018 g         1000 t
ORIGIN      
        1 ggtcgggacg gctgcctcga gatcggcggc ttcatccgga gcaggacggc ctgatcctgc
       61 tgggcgtggg cgatagcgac cgtcgctacg ccggcgcctt ccggtgatgg tcggtcgcgc
      121 tttggtaggc gtggccgatg cggtagagca gcgcctcgtc gaacgggcgg ccgacgagct
      181 gcaggccgat cggcgcgccg ttcgaatcga agccgccggg caccgagaac gcgggcaggc
      241 caagcgtgtt gaacggccgc gtcaatccgg tgaagcgcgc gaccatgctg agggtggcgg
      301 gaccgccgga tttctcgacg tcggtctcct cgagggtcgg gatggggaag gggatcgccg
      361 gcagcagcac ggcgtcgatg tcctccatcg ccgtctcgag gaactcgcgc acgaaatgcg
      421 cgcgcaggcg caacgcgtcg atatactgcg tcgccgggat gaagaaccca gcctccatgc
      481 gcgtgcgcac ctggttggca tagggcgcgt cggcctccat ccatggccgg tgcatggcgg
      541 ctgcctcgca cttcacgatc acctcggccg cgcgatagag cgtcgtgaaa tcgggaagct
      601 tcgccggcgc gatcttggcg ccgagcttgg cgagtgtatc agccgccgcc tgcaccgcgc
      661 tgccgacctg ggtgtcgatg ggctccagcg cgtcgggcag tgcgaggccg atcctgaggc
      721 cgcttacgcc gccttcgagc aaagcctcgt agtccggcac cggcttttcg ctggtcgtcg
      781 aatcgtcggg atcgtggccg gcgacaatgc ccagcatgcg ggcgttgtcg cgcacggtgc
      841 gcgtcagcgg cccgacatgg tcgaggctcc acgagcgcgc cacggcgccg gcgcggctca
      901 cgcggccgta ggtcgccttc atgccgacga cgccgcaggc tgcggccggc aggcggatcg
      961 agccgccggt gtcggagccc aacgcgccat agaccaagcg ggcggcgacc gaggcgcccg
     1021 agccgctcga gctgccgccg gtgacgcgcg tttggtccca cggattgcgg cagtggccgt
     1081 gatggacgtt gtggccggtc gggccggcag cgaactcggc catgttgagg aagcccagct
     1141 cgaccacgcc ggccgcatcg agcttacgca gcaccgtcgc cgtgacgggc gccacccagt
     1201 cgcgcctgat ctcgctgccg ccggtcgaga tctcgccctt gcggtagtac atgtccttgt
     1261 gcgccatcgg cacgccgtgc agcgggccgc gccgtcggcc ggcggcaagc tccttgtcca
     1321 tggcgcgggc ctgttccagc gccttctccc ggtgaaggcg caggaaggca ttgatgcgcg
     1381 gctgccagac ttttatgcgc gccaggcacg cttcggtcgc ctgcaccgaa gtgatgcggc
     1441 cggcggcgat ggcgtcggcg atctcgctga gatcgcgcag tgccagatcg tcgtttatca
     1501 tttcgcctcg cgcgcgatga cgctggcaaa ggccgccggc tcgtcgtcga aggtgagccg
     1561 cgccgctgcc gccttgcgga cggcatcgtt caacacctcg acctcggccg caatctcggc
     1621 cagccgcttg tcgtcgtagt cgagcccttg caggtgccgc gcgatgccgg cggcgaggcg
     1681 agtcttgtcg tccatgaaac ctcctcaggc agccaggcgg agcttgcgct tgcccaaccg
     1741 cgcctggtcc tcggccgtga atgtcatgat cttgcgggcc ttctggtcga acttcatgcc
     1801 gacggcttcc gcgcaagcag caagcgtgcc ggtttcggcc tcgaacagga agtgggtgaa
     1861 gctcagcacc ctgtcggtga aggaggcgag cccgctcatc accaccagaa ggtcgccggc
     1921 atggagcggc cggcgatagt ggttcagcat ctcgacaatg accgaacctt cctggcgctc
     1981 ctgcatggcg gcgcggtcga agccgagatg gttccacagc accggcgcgc cgtcggagta
     2041 gcggccgaat tgatggtggg gcaggaacgt cccgtgctcg tcgcattcag cgggcgtgat
     2101 caccgtgcgc cccacgtcga cgaggccgac gcgccgggcc tcgccgagcg ccagctcggg
     2161 caaggcaagc cggccgacgc tgcgcggcct cgcatggtcg ggcagcgaca cttgcgccgc
     2221 ttcggcgtgc tcacgaaaag acggcggcca gggcctgtcg ctgtcgatcc gccgacgcag
     2281 cgtcgcggcg accgtgccgt cgaacgaatt gcggatttcg tgataggcga ccagatgccg
     2341 ctcaccgacc tcgaccggcg ccgacagcac ctcgacggga tcgaccgccc ggaactcgcg
     2401 cagatagcgg acatggtccc aggcgacgca gggctcgagc cgggcggcgc gttgcgcgcg
     2461 cggtccgagg cccagaccgg cgagcaggtg ggccgacgcc tcgtggccga attcggtgta
     2521 gaactggacg ttcagatgat cgttttcatc gcactgccaa gtgtttacgg cggtgctgaa
     2581 agtcgggatc aggccggggc tcgacacgcc acgctctctc tgcagtctgt ggatgactgc
     2641 ccaaatggcc aaaaaagccc caagaatcga catttttcgt gcattggggg cttgcgggac
     2701 gtcgattcgt ggataacctt ggatttcgtc aacgctaccc tggggcgtca ggaagacgtt
     2761 ggcgaaacga aaaaacgcaa gggacccctc cactatggca accgcaccca caaccaaacc
     2821 gacagttcca accgttccgc tttccaaggt cgcggccgag ttggccgaga agaccggcat
     2881 gaccaagaag gacgcgaccg gcgccctcga cgatttcgtc ggcctgatcg tgaagcatct
     2941 gaagaagggc aacaaggtcc gcatcacggg cctcggcatc cttcaggtgc gcaaccgtcc
     3001 ggcgcgcatg ggccgcaacc cggcaaccgg cgaggcgatc aagatcaagg cgtcgaagaa
     3061 ggtcgccttc cgcgtcgcca aggatctcaa ggaagcgatc tgacccgttt ctgacggaga
     3121 aagatcgggc gggtaccgcg aagcggaccc gcccttcttt ttgcccgcga tcgatccggc
     3181 gtagtatggc ccacgcgatc gacggggtga cgtgacaagc ttcattattc tgaagattct
     3241 ggcgcagctc gcctcgccaa tgggcatcct cgtcgcggga ctggtcgcgg gcgccgtgct
     3301 gacgctgctt cggttgcggc gcctcggccg gctggttgcc gccctggcga ttgcgcagct
     3361 catcatcttt tccttcagcg cggttgccga cgctctgctc ggtccgctgg aggacatggc
     3421 gcgtagcgaa gctgccgcgg cgccggtctg ttgttacgag gccatcgtcg tgctgggcgg
     3481 cagcatcggc ccggccgtgc cgccattgcg tcccgacccc aaactctccg acagctccga
     3541 tcgcgtatgg cacgccgccc gcctgttcca tcgcggcgtg gctccgcgca tcatcgtgag
     3601 cggcggatcc tatgcggtgc agaccggcga ggcgccgccc agccagacgg aagcgatggc
     3661 gatgcgccaa ttcctgctcg cgctcggcgt gcccgacgac cgcatcgtca tggaagggaa
     3721 gtcgctgaac accatcgaga atatgcgcga gacccgcgcc ctggtcggcg cggcgcctgt
     3781 cgctctggtc acctcggcct atcacatgcc gcgggcgctc cgtttggcgc gccgggcggg
     3841 cctcaatgcc ggggcttttc ccacggattg gcacgtgctg ccgggaacgt cgccgtggtg
     3901 ggagtccctt tggccatcgg taggcgcgct caccgcctcg ggcgtcgctt tgagggagta
     3961 cctggcgctc gccttcgaca accgcagcgt caacgtgaaa accgagccat gacgcgcacc
     4021 gcctatggtc tcgaccgccg ctccgcgctg cgcgccgctg caggctttgc tctcgccgca
     4081 ccgctgcttg tgccgctcgc ccgccggccg cgcgcccaat cgctcgacaa gctgagcttc
     4141 cacaccgatt ggcgcgccca ggccgagcat ggcggttact atcaggcgat cgccgccggc
     4201 ctctaccgcc aggcgggcat cgagtgcgac ctgcgccagg gtgggcccag cctcaatatc
     4261 agccagctgc tcctcggcgg ccgcgtcgac atgaccatga cgaacagttt cgaagccttc
     4321 gccttcgtgc gcgaagacgc gccgttctac atcattgccg ccatcttcca gaaggatccg
     4381 caggtgctga tcggccatcc cgacacgggc ctcgacggct tcgagaagct gcatgggcgc
     4441 accctgttga tcggcggcgg cgggcgcatc acctactggc cctatctcag gcgcaagtac
     4501 ggcctctccg acagccaact caggccctac aatttcaaca tggcgccgtt cctcgccgac
     4561 aagaacgcga tccagcaggg cttcctctca tccgagccgt tttcgatcgc ccaggcgctc
     4621 ggccggccgc cggctgtgct gctgatcgcc gatgcaggtt tcagcgcata ccagaacgcc
     4681 atcgcgatct cgcgcaagat ggcgagcgag aagcgtgacc tggtgcagcg cttcgtcgat
     4741 gcctcgctca acgggtgggc gcaatatctc aagggtgggc ccgagatcgc cgcggcgaac
     4801 gcgctcatca agcaggccaa ccctgaacag accgacgatc gcatcgccta tgccatcaaa
     4861 gtgatgaacg agcgcggcat cgtcttgtcg ggcgacgccc tccagaatgg catcggtgcc
     4921 atgactgacc gacgctggag aaacttctac gattccatgg tcgaggtcga tgtgctgccc
     4981 aagggagtgg acgtcgcccg cgcctacaca ctggaattcg tcaacaaggg tatcggaaag
     5041 gcataggaga gcggcatgta caaggtcagc gaagaacaca cgatgctgcg cgatctggtg
     5101 aagaagttcg tgcgcaacga gctgatgccg ctggaaaaga acatcctcga ccgcttcgcg
     5161 gccggccagc cggcggcgct ctccgacgag gagaacgcca agcttttcaa gcagtgcaag
     5221 gagctcggcc tgtgggcact cgacgtgccg gaggaagtgg gcggcgccaa cctgccggcg
     5281 gtggcgctgg tcggtgtcaa cgaggagctg ggctatacct cggtgccctt caccttcccg
     5341 ccggattccc cgaacttgca catgctgttg gccacggcca atcccgagca gcgcaagaaa
     5401 tatctcgaac cctatgccgc gggcgagacg atctcggcca tcgccatctc cgaaccgggc
     5461 gcgggcggcg atcccgccgg catgaagacc aaagcggtca aggacggcgg cgactgggtg
     5521 atcaacggcc gcaagatctg gatcagccgc atcgccaagg ccgatttcac gatcgtcatg
     5581 gcggtaaccg attccaatct cggcgcgagg ggcggcatca ccgccttcct ggtcgacaaa
     5641 ggcaccaagg gcctggtggt ggcgcgcgcc atccccatgc tggccggcca gcgcacctac
     5701 gaggtcgtgt tcgaggattg ccgcgtgccc gagacgcagg tgctgggtcg catcggcgcg
     5761 ggctttgcgc ccatgcagct tcgcctcacg gtacgccgcc tgcagatggg cgcctggtgc
     5821 atcggcatga cgcagcgcgc gctcgacatg ctggtcgagc acgccaacca gcgggtcact
     5881 ttcggccaaa agctcgccga ccgtcaggcc atccagtggt gggtggcgga tgcggcgacc
     5941 aagctgcatg cctgccggtt gatggtgatg gacgccgcgg tcaagcagga cgagggccgc
     6001 gacgtgcgca tggaggcctc gatgatcaag gtctttg
//
LOCUS       DASWGA010000944         2112 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2016394, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000944 DASWGA010000000
VERSION     DASWGA010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2016394"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1163)
                     /locus_tag="VF991_21720"
     CDS             complement(<1..1163)
                     /locus_tag="VF991_21720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9559127.1"
                     /translation="MLADRYGLPISTSSETARDAYIAGCDGLLSAFPGDAAHLARALA
                     ADPRFALAHAALARARFLMADVPGARESAARAREFAATATARERAHVDALCLAIEGKP
                     VEALAATRAHLDQHPHDAMVASPATGVFGLIGFSGRQGREPEQVAFLEALKPHLADDW
                     WFQAVYAFALEEVGRLDEAQGLIERSMAKNPRNAHGAHIKAHVLYEQGEDRAALDYLE
                     SWLPAYPREGLMHCHISWHVALFALMVGDATRAWQVYEAQVHPGGAWGPALNVATDSA
                     AFLWRAELAGHARRPQLWREAHDYAQKSFPKPGIAFVDVHRALAHVAVGDRDGIEGIV
                     SELEQRAASGRSPAGDVVPRLAAGLAAYGRGDWAAAIATLEPALAETVRIGGSR"
     gene            1314..2078
                     /locus_tag="VF991_21725"
     CDS             1314..2078
                     /locus_tag="VF991_21725"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008189443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9559128.1"
                     /translation="MSQELNGKVALVTGASRGLGEGTACALAAGGAAVMLVARDGALV
                     SRVARDIAAKGGRAEALSCDVSNYLAVEKVVAQAKARLGGLDILINNAGVIEPIAEVA
                     ASDPAAWAQNISINLIGAYHVLRAVLPGMLAGGGGSIVNVSSGAAYRPLEGWSAYCAG
                     KAGLAMLTRSIALETAGKGIRLFGFSPGTIDTDMQVKIRASGINMISRIPRGELSPVA
                     HAVRGLMYLCTRASDDLLGQDASMRDEAFRTRIGLA"
BASE COUNT          312 a          743 c          747 g          310 t
ORIGIN      
        1 cggctgccgc cgatccgcac cgtctcggcc agcgccggtt cgagcgtggc gatggcagcc
       61 gcccaatcgc ctcttccata ggccgcaaga ccggccgcca ggcgcggcac cacatcgccg
      121 gccggcgaac ggcccgaggc ggcgcgctgc tcgagctccg acacgatgcc ttcgatgccg
      181 tcacggtcgc cgacggcgac atgcgcgagc gcgcgatgga catcgacgaa ggcgatgccg
      241 ggcttgggaa aggatttttg cgcgtagtcg tgcgcctcac gccacaactg aggccgccgc
      301 gcgtgaccgg ccagctcggc gcgccacagg aaggcggcgg agtcggtggc gacgttcagc
      361 gccggacccc aggcgccgcc gggatggacc tgcgcctcgt agacctgcca ggcgcgtgtc
      421 gcgtcgccca ccatcagcgc gaacagcgcc acgtgccagg agatgtggca gtgcatcagc
      481 ccctcgcgcg gataggccgg cagccacgat tcgagataat ccaacgcggc gcggtcctcg
      541 ccctgttcgt acagcacgtg cgccttgata tgggcgccat gcgcgttgcg tggattcttg
      601 gccatgctgc gctcgatcaa gccctgcgcc tcgtcgagcc ggccgacctc ctccagggca
      661 aaggcgtaga ccgcctggaa ccaccagtcg tcggcgaggt ggggtttgag cgcttcgagg
      721 aacgccacct gttcgggctc gcggccctgg cggccgctga agcctatgag gccgaacacg
      781 ccggtcgccg gcgaggcgac catggcgtcg tgcggatgct ggtcgagatg ggcgcgcgtc
      841 gccgccagcg cctcgaccgg cttgccctcg atggcaaggc agagcgcgtc gacatgggcc
      901 cgctcgcgcg ccgtagccgt cgccgcgaat tcgcgggcgc gcgccgccga ttcccgcgcg
      961 ccgggcacat cggccatcag gaagcgcgcg cgggccagcg ccgcgtgggc gagcgcaaag
     1021 cggggatcgg cggccagggc gcgcgccaga tgggcggcgt cgccggggaa ggccgacagc
     1081 aggccgtcgc agccggcgat gtaggcgtcg cgcgcggtct cggaagacgt gctgatcggc
     1141 agcccgtatc ggtcggcgag catgaagacg gttcctcctg atgttgcgcc gatcttcagg
     1201 gcaagcgggc cgccaatgca acgccctttc gagaagcgaa cgccgaatga tgccggcccc
     1261 atgagaccaa tggtattgct gcaacgtcat tgccctcagg cgcaggaggt ctcgtgtccc
     1321 aggaattgaa cggaaaggtc gcgctcgtca ccggcgccag ccgcggcttg ggcgagggca
     1381 cggcctgcgc gctcgcggct ggcggggccg ccgtcatgct ggtggcgcgc gatggcgcgc
     1441 tggtctcgcg cgtggcgcgc gacatcgccg ccaagggcgg ccgcgccgaa gccctgtcgt
     1501 gcgatgtctc gaactactta gccgtcgaga aggtcgtcgc ccaggccaag gcgcgcttgg
     1561 gcggcctcga catcctgatc aacaacgccg gcgtgatcga gcccatcgcc gaggtcgccg
     1621 cgtccgatcc ggcggcgtgg gcgcagaaca tctcgatcaa tcttataggc gcctaccatg
     1681 tcctgcgcgc cgtgctgccc ggcatgctgg cgggcggcgg cgggtcgatc gtcaacgtct
     1741 cgtcgggcgc cgcctaccgg ccgctcgagg gctggagcgc ctactgtgcc ggcaaggccg
     1801 ggctggcgat gctcacccgg tcgatcgcgc tcgagaccgc cggcaagggc atccgcctct
     1861 tcggcttctc gcccggcacc atcgacaccg acatgcaggt caagatccgc gcgtccggca
     1921 tcaacatgat cagccgcatc ccgcgcggcg agctctcgcc ggtcgcgcat gccgtgcgcg
     1981 gcctgatgta tctgtgcacg cgggccagtg acgatctttt gggccaggac gcctcgatgc
     2041 gcgacgaggc cttccgcacc cgcatcggct tggcttgagc tcatcctctt ccggaccgcg
     2101 ggcgtctcgc cc
//
LOCUS       DASWGA010000945         4081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1127385, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000945 DASWGA010000000
VERSION     DASWGA010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4081
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1127385"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VF991_21730"
     CDS             <1..192
                     /locus_tag="VF991_21730"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF013356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEX9559129.1"
                     /translation="EVRITMTYPVIESSRQVAFLVAGKEKAAIFKAIRAGGSDVPAAR
                     VNPVGELVWFVDRAAAGES"
     gene            197..883
                     /gene="rpe"
                     /locus_tag="VF991_21735"
     CDS             197..883
                     /gene="rpe"
                     /locus_tag="VF991_21735"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEX9559130.1"
                     /translation="MAAAILVAPSVLSADFTRLGEEVRAVDAAGADWIHVDVMDGRFV
                     PNITIGPVVLQAIRQSTAKPLNVHLMIVEPERYLAAFAEAGADHLLVQAEPGSTIHLH
                     RTLGQIRALGKKAGVVLDPASPPELIEYVLHLCDIILVMTVNPGFGGQSFLPEMLPKI
                     RRLRAMCAQRGLAPVIEVDGGENATTAGQAAAAGATAIVAGSAIFGSKDYKAAIAAIR
                     ASAAAGAAKP"
     gene            880..2145
                     /gene="rpiA"
                     /locus_tag="VF991_21740"
     CDS             880..2145
                     /gene="rpiA"
                     /locus_tag="VF991_21740"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF001924.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEX9559131.1"
                     /translation="MSAARPADANRDALKRAAAEAAVELVQEGMVVGLGTGSTAAFAV
                     DALARRHRQGLRFVGIATSERTAAQAKAAGLPLTSFAEHRLIDLTIDGADEVERGTLN
                     LIKGLGGALLREKIVAVASRRLAIVVDGAKLVDRLGSSGPVPVEVVAFGLEATRATLE
                     VLGASVRPRLSPAGEPFVTDSGNRILDCSFGPIADPARLEERIGRVVGVVESGLFISR
                     AGPVFVADQTGVHRLDSPRAHRGTPPILVIMGVSGAGKSTIARELAARLGWAFEEGDA
                     LHPEANVAKMHAGIPLTDADRQPWLERVAAWIDDQRARKQPGIITCSALKRSYRRIVI
                     GDRPEVRLVYLRGGRDLIAEHLAGRERHFMPPSLLQSQIDTLEEPSPDEDPLTVDVGP
                     PAAQVADEIIRLLGASATVGSVHAGQRQA"
     gene            2123..>4081
                     /locus_tag="VF991_21745"
     CDS             2123..>4081
                     /locus_tag="VF991_21745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020096140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HEX9559132.1"
                     /translation="MPANAKPEQQRLDEANARRQAWRNWGPYVSERQWGTVREDYSAD
                     GDAWNYFSHEHARSRAYRWGEDGIGGFCDAKQTLCMAVALWNGKDPILKERMFGLSNR
                     QGNHGEDVKELYYYLDAAPTYSYARMLYKYPQAEFPYDLLVQENARRTRQEPEFEILD
                     TGIFDADRYFDVDIEYAKAGAEDILLRLTVTNRGPEEAAIHVLPHVWFRNTWSWFTDR
                     PKPSLVRVHNDVVVNHEKLGIYAVQFDRPDEIKFCENETNIAKLFGGQETGQPCKDGL
                     HDYVVRGRKDAVDPAKGTKAAGIYRRTIAAGASTTIRVRLSPGPAKPAPFADFEQIFD
                     LRKSEADAFYAELQRKVLDEDLRRIQRQAFAGVLWSKQYFYLDVTEWLDGDPAQPKPP
                     RTRFAGRNCEWVHANMEDIVSMPDKWEFPWFAAWDWAFHLTTLAYLDLEDAKHQLILL
                     GQSWYMHPNGQLPAYEWNFSDVNPPVQAWAALRVYDAERRRNGKGDRKFLERVFTKLL
                     LNFTWWVNRKDPHGLNVFEGGFLGMDNIGVFDRSGPLPVNGTLVQSDGTSWMAMFSLN
                     MLRIAIELAQEDDAYQDIATKFFEHFLMIGGAMTNLGGEGLSLWDDGDNFFYDWLVMS
                     NGEATPLRVRSLVGLIPMFAVETADMALL"
BASE COUNT          690 a         1354 c         1345 g          692 t
ORIGIN      
        1 gaggtccgca tcaccatgac ttatccggtg atcgagagca gccggcaggt cgcgttcctg
       61 gtggcgggca aggagaaggc ggcgatcttc aaggcgatcc gtgccggcgg cagcgacgtg
      121 ccggcggcgc gcgtcaaccc cgtcggcgag ctcgtctggt tcgtcgaccg ggcagccgcg
      181 ggcgagagtt agagcgatgg ccgccgccat cctcgtggca ccctccgtcc tgtcggccga
      241 tttcacccgc ttgggcgagg aggtccgcgc cgtcgacgcc gccggtgcgg actggatcca
      301 cgtcgatgtc atggacggcc gcttcgtgcc caacatcacc atcgggcccg tcgtgctcca
      361 ggccatccgc caatcgacgg caaagccgct caacgtccat ctgatgatcg tcgagccgga
      421 gcgctatctc gccgccttcg ccgaggccgg cgccgaccac ctgctggtcc aggccgagcc
      481 tggctcgacc atccatctgc atcgcacgct cggccagatc cgcgcgctcg gcaagaaggc
      541 aggcgtggtg ctcgacccgg cgagcccgcc ggagctcatc gaatatgtcc tgcatctctg
      601 cgacatcatc ctggtgatga cggtcaatcc cgggttcggc gggcagtcct tcctgcccga
      661 gatgctgccc aagatccgcc gcctgcgcgc gatgtgcgcc caacgcggcc tcgctccggt
      721 gatcgaggtc gatggcggcg agaacgcgac gacggcggga caagcggccg cggccggcgc
      781 cactgcgatc gtggccggct cggcgatctt cggcagcaag gactacaagg ctgccatcgc
      841 ggcgatccgc gccagcgccg ccgccggcgc ggccaagcca tgagtgccgc gcgcccggcc
      901 gatgccaatc gcgatgcgct gaagcgcgcc gcggcggagg cggcggtcga gctggtccag
      961 gagggcatgg tcgtcgggct cggcaccggc tcgacggcgg ctttcgccgt cgacgcgctc
     1021 gcccgccgtc atcgacaggg tctgcgcttt gtcggcattg ccacgtcgga acggacggcg
     1081 gcgcaggcca aggcggcggg cctcccgctc acctcgttcg ccgagcatcg gctgatcgat
     1141 ctcacgatcg acggcgccga cgaggtcgaa cgcggcactc tcaacctgat caagggactg
     1201 ggcggcgccc tgttgcgcga gaagatcgtc gccgtcgcca gccgccgcct cgccatcgtc
     1261 gtcgacggcg ccaagctggt ggatcggctg gggtcatcgg gaccggttcc cgtggaagtc
     1321 gtcgccttcg ggctggaagc gacccgggcg acgctcgagg tgctgggcgc cagcgtccga
     1381 ccgcgcctgt cgccggccgg cgagcccttc gtcaccgaca gcggcaaccg catcctcgac
     1441 tgcagcttcg gtccgattgc cgatccggcg cggctcgagg agcgcatcgg gcgcgtcgtc
     1501 ggcgtggtcg aaagcggcct tttcatcagc cgtgccggtc cggtcttcgt cgccgaccaa
     1561 accggcgtcc atcgtctcga cagcccgcgt gcccatcgcg gcacgccgcc gatcctggtg
     1621 atcatggggg tctcgggagc gggcaagtcg acgatcgcgc gggaactggc ggcgcggctg
     1681 ggctgggcct tcgaggaggg cgatgcgctc catcctgagg ccaacgtcgc caagatgcat
     1741 gctggaattc ccttgaccga cgccgaccgc cagccctggc tcgagcgcgt ggccgcctgg
     1801 atcgacgatc agcgggcgag gaagcagccg gggatcatca cctgctcggc gctcaagcgg
     1861 tcctatcgcc ggatcgtcat cggcgaccgc ccggaagtcc ggctggtcta ccttcgcggc
     1921 gggcgcgatc tcatcgccga gcacctggcc gggcgcgagc gccatttcat gccgcccagc
     1981 ctgctgcaaa gccagatcga taccctcgag gagccgtcgc cggacgagga tcccctgacc
     2041 gtcgatgtcg gcccgccggc ggctcaggtg gccgacgaga tcatccgcct gctcggcgct
     2101 tctgcaacgg taggatcggt gcatgccggc caacgccaag cctgaacagc agcgcctgga
     2161 cgaggcgaac gcgcgccggc aggcctggcg caactggggt ccttatgtca gcgagcgcca
     2221 gtggggcacc gtgcgcgagg actacagcgc cgatggcgac gcctggaatt acttctccca
     2281 cgagcatgcg cgcagccgtg cgtatcgctg gggcgaggat ggcatcggcg ggttttgcga
     2341 cgccaagcag acgctgtgca tggcggtcgc cttgtggaac ggcaaggacc cgatcctgaa
     2401 ggagcgcatg ttcggcctga gcaaccgcca gggcaatcac ggcgaagacg tcaaggagct
     2461 ctactactat ctcgacgcgg cgccgaccta cagctacgcc cgcatgctct acaagtatcc
     2521 tcaggccgaa tttccctacg accttctggt gcaggagaac gcgcggcgca ccaggcagga
     2581 gccggagttc gagatcctcg ataccggcat cttcgacgcc gaccgctatt tcgatgtcga
     2641 tatcgagtat gccaaggcgg gtgccgagga catcctgctg cggctcaccg tcaccaatcg
     2701 cggccccgag gaagcggcga tccatgttct gccgcacgtc tggttccgca acacctggag
     2761 ctggttcacc gatcgtccaa agccctcgct cgtgcgcgtc cacaacgatg tcgtggtcaa
     2821 ccatgagaag ctcgggatct atgccgtcca gttcgaccgg ccggacgaga tcaagttttg
     2881 cgagaacgaa accaacatcg cgaaactctt tggcgggcag gagacaggac agccatgcaa
     2941 ggatggtctt cacgactacg tcgtcagggg ccgcaaggac gcagttgatc ccgccaaggg
     3001 caccaaggcg gctggtattt accggcgcac gattgccgcg ggcgccagca cgaccattcg
     3061 ggtccggctg agcccaggtc ctgccaagcc cgcacccttc gccgacttcg agcagatctt
     3121 cgatctgcgc aaatccgagg cggatgcctt ctatgcggag ctgcaacgca aggtgttgga
     3181 cgaggatctc cggcgcattc aacgccaggc tttcgccggc gtcctgtggt cgaagcaata
     3241 tttctactta gacgtcacgg agtggctgga cggcgatccg gcgcaaccca agccaccccg
     3301 gactcgcttc gccggccgca actgcgagtg ggttcatgcc aatatggaag atatcgtctc
     3361 gatgccggac aaatgggagt ttccctggtt cgcggcgtgg gactgggcct ttcatctgac
     3421 cacgctcgct tatctcgatc tggaggacgc caagcatcaa ctgatcctgc tcggccaatc
     3481 ctggtacatg cacccgaacg gacagctgcc cgcctacgaa tggaacttca gtgacgtcaa
     3541 cccgcccgtg caggcctggg cggccttgcg cgtctacgat gccgagcggc ggcgcaacgg
     3601 caaaggtgac cgcaagtttc tcgagagagt cttcaccaag ttgttgctca atttcacctg
     3661 gtgggtgaat cgcaaggacc cgcacggcct gaacgtcttc gagggcggct ttctcggcat
     3721 ggacaatatc ggcgtcttcg accggtcggg tccgctgccg gtgaacggca cgctggtgca
     3781 gtccgacggc acatcgtgga tggcgatgtt cagtctgaac atgctgcgca tcgccatcga
     3841 gctggcgcag gaggatgatg cctatcagga catcgcgacc aagttcttcg agcattttct
     3901 gatgatcggc ggcgcgatga ccaacttggg cggtgagggt ctgagtttgt gggacgacgg
     3961 cgacaatttc ttttacgact ggctcgtgat gagcaatggc gaggcgacac ccctgcgcgt
     4021 tcgctccctg gtcggcctga ttccgatgtt cgccgtcgag accgcagaca tggccttgct
     4081 g
//
LOCUS       DASWGA010000946         2706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_878540, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000946 DASWGA010000000
VERSION     DASWGA010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_878540"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1083
                     /locus_tag="VF991_21750"
     CDS             <1..1083
                     /locus_tag="VF991_21750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9559133.1"
                     /translation="KYGLISAALVVFTLVITDFGIAKVIGGNFNVLATDVYKQVIGQQ
                     NFSMGAVIGMVLLAPAALAFVVDRVVQRKQVALLTARAVPLIPKPKPGRDALFTAFCT
                     VISFAILGILGMAAWGSLIKYWPYNLGLTLANYNFANFDANGWDSYFNSLEMAAGAAI
                     FGTAVMFVGAWLNEKTRGFGAVRGIVQLLAFLPMAVPGLVLGLGYIFFFNAPGNPLNF
                     LYATMAILVINTVAHFYTVGHLTATTALKQIDPEFESVSASLKVPIWRTFTRVTAPIC
                     LPAILDIAIYLFVNAMTTVSSVIFLYAPDTKLASVAAVNIEEAGTTAAAAALCMVIVV
                     TSAAVKALHVLADRFLLGHLQAWRRR"
     gene            complement(1087..1326)
                     /locus_tag="VF991_21755"
     CDS             complement(1087..1326)
                     /locus_tag="VF991_21755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559134.1"
                     /translation="MTKRKPDRAKTPRIVVTPEMIEAGVSTLNYWGKATKSDLAAAIY
                     RAMSMAAPPNRDGYAGADPTMLDALQLLGHRLPKK"
     gene            complement(1367..2095)
                     /locus_tag="VF991_21760"
     CDS             complement(1367..2095)
                     /locus_tag="VF991_21760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9559135.1"
                     /translation="MRILVVEDDGELVVLLAKALARAGLDVDSARNAADAEASLRSMH
                     YAAVVLDLGLPDADGLVVLDRMRRRRDATPVLILSARGGLDDRITGLDKGASVYLVKP
                     FATEELVARLQALLRRSPASEGQRLTLGNLSLEIETRQAAVAGKMLTLPAREADLLEV
                     LLKRSGRVVSHEALEGQVFGASQGVSSNAIEVYIHRLRRLLAEAAANVVIHTIRGAGY
                     LMDVDKNGPQQSGQDSVIGSDRSV"
     gene            2267..>2706
                     /locus_tag="VF991_21765"
     CDS             2267..>2706
                     /locus_tag="VF991_21765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004783077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrpF domain-containing protein"
                     /protein_id="HEX9559136.1"
                     /translation="MNQLRIPAVYMRGGTSKGVFFLAEDLPSDPQMRDRILMRVIGSP
                     DRYGKHTDGMGGATSSTSKVVILSKSRREDCDVDYRFGQVAIDAPVIDWSGNCGNLSA
                     AVGPFAISMGLVGAPADGTATVRIWQADIKKKIVSHVPMSGGEVR"
BASE COUNT          445 a          903 c          845 g          513 t
ORIGIN      
        1 aagtatggcc tgatcagcgc cgcgctggtc gtgttcaccc tggtgatcac cgatttcggc
       61 atcgccaagg tgatcggcgg caatttcaac gtcctggcga ccgacgttta caagcaggtg
      121 atcggccagc agaatttttc catgggcgcc gtgatcggca tggtgctgct ggcgcccgcg
      181 gcgctggcct tcgtcgtcga ccgagtggtg cagcgcaagc aggtggcgtt gctcacggcg
      241 cgcgccgtgc cgctgatccc caagccaaaa ccgggccgcg acgccttgtt caccgccttc
      301 tgcacggtga tctccttcgc catcctcggc atcctcggca tggcggcgtg gggctcgctg
      361 atcaagtact ggccgtacaa tctcggcctg acgctcgcca actacaactt cgccaatttc
      421 gacgccaacg gctgggattc ctatttcaac tcgctcgaga tggcggcggg ggcggcgatc
      481 ttcggcaccg cggtgatgtt cgtcggcgcc tggctgaacg agaagacccg gggcttcggc
      541 gcggtgcgcg gcatcgtgca gttgctcgcc ttcctgccca tggcggtgcc cggcctggtg
      601 ctgggcctgg gctacatctt cttcttcaac gcccccggca atccgctgaa cttcctctac
      661 gccaccatgg ccatcctggt gatcaacacc gtcgcgcatt tctacacggt cggccatctc
      721 acggcgacga cggcactgaa gcagatcgat cccgagttcg aatcggtctc cgcctcgcta
      781 aaagtgccga tatggcgcac cttcacgcgc gtgaccgcgc cgatctgcct gccggccatc
      841 ctcgacattg cgatctacct gttcgtcaac gccatgacga ccgtgtcgtc ggtgatcttc
      901 ctctacgccc ccgacaccaa gctcgcttcg gtggcggcgg tgaacatcga ggaagccggc
      961 acgaccgcgg ctgcggcggc gctctgcatg gtgatcgtcg tcacctcggc cgcggtcaag
     1021 gccctgcacg tgctggccga ccgcttcctg ctgggccatt tgcaggcctg gcggaggcgc
     1081 tgagggtcat tttttcggca atcgatggcc aagcagctgc aaggcgtcga gcatggttgg
     1141 atcggcgccg gcgtagccgt cgcggttcgg cggcgcggcc atcgacatgg cacggtagat
     1201 cgccgccgcc aggtcggact tcgtggcctt tccccagtag ttgagcgtac tgacgccggc
     1261 ctcgatcatc tcgggcgtga cgacgattcg cggcgtcttg gcccgatccg gttttcgctt
     1321 tgtcatgggc acaccatgaa ttgcggccga aaatggcagg aaaggcttac accgacctgt
     1381 cgcttccaat gacactgtct tgcccgctct gctgcgggcc gttcttgtcg acgtccatca
     1441 ggtagcccgc cccccggatc gtgtggatca cgacattcgc ggcggcttcg gccagcagtc
     1501 gacgaaggcg atggatatag acctcgatcg cgttcgacga gacaccctgc gacgctccga
     1561 agacctggcc ctcaagcgct tcgtgcgaga cgacccggcc gctgcgcttc agcaagactt
     1621 ccagcaggtc ggcttcgcgc gccggcaggg tgagcatttt gccggcaacg gcggcttgcc
     1681 gggtctcgat ctccagcgac agattgccga gcgtgagccg ttggccctcg gaagcgggcg
     1741 atcggcgcag cagcgcctgc aggcgcgcga ccagttcctc cgtggcaaac ggcttcacca
     1801 ggtagacgct ggcgcctttg tccaatccgg tgatccgatc gtccaacccg ccgcgtgccg
     1861 aaagtatgag gaccggcgtg gcgtcccgcc gtcgccgcat ccggtcgagc acgacaagac
     1921 cgtcagcatc gggaagaccg aggtccagga cgacggcggc atagtgcatc gagcgcagcg
     1981 aggcttcggc atcggctgcg ttgcgcgccg aatcgacgtc gaggccggcg cgtgccaggg
     2041 ccttcgcaag aaggacaacg agctcgccgt cgtcctcgac caccagtatc cgcattttcc
     2101 tcggcgcctc gacgctctgg gattgcgcca cagtagatcg ctgcaaaacg gccgtcgaga
     2161 tcacgcacgc tcgtggtcag gcagttgtaa tttgtccgcc gtcttgttca ctcgcagtgc
     2221 tgccgcgcta tattgccggc ttcagcatat cgacgtcgag gcgcccatga accaactccg
     2281 catcccagcc gtctacatgc gcggcggcac cagcaagggc gtcttcttcc tcgcggagga
     2341 cctgccgtct gatccgcaga tgcgcgatcg catcctgatg cgcgtgatcg gcagccccga
     2401 ccgctacggc aagcacaccg acggcatggg cggcgcgacc tcgagcacga gcaaggtcgt
     2461 catcctgtcg aaatcccggc gtgaggactg cgacgtcgac tatcgtttcg gccaggtggc
     2521 catcgatgcg ccagtaatcg actggtctgg caattgcggc aacctcagcg ccgcggtcgg
     2581 tccttttgcg atcagcatgg gcctggtcgg cgcgccggcg gacggcaccg ccactgtccg
     2641 catctggcag gccgacatca agaagaagat cgtcagccac gttcccatga gcggcggcga
     2701 agttcg
//
LOCUS       DASWGA010000947         4603 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_878657, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000947 DASWGA010000000
VERSION     DASWGA010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4603
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_878657"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1231)
                     /locus_tag="VF991_21770"
     CDS             complement(<1..1231)
                     /locus_tag="VF991_21770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559137.1"
                     /translation="MALADGELGGHDRTSALQTSLAGLVLLAGLPVLAAMWALLSPNL
                     VLSHEMTWDFLYNLSGAWQLRHGHVAHVDFHEPVGALNFVLTRLGFEVFGPTPFAFLA
                     GATIIAVGVFASATAAAMRRLPLVPATLFVIFVSLLVLMPANVGDKPNAYSFAMSYNR
                     YGWSLLSILALILFLPPRDRLKRDQIDVVNAGLLLAVLFYLKVTYFAAGLAFLGLAIM
                     ICPHVQARLAAWLAVGSLVVANALAPWNHAYLVDILQTASAAGAVRNSLGFHLNNFFA
                     SVEGYAPYAAGVVVAAWMWRRGMAPPRLPLAVAAIVVIGGFVLSQNHQSHGLPVGIVI
                     AFLLYDQIRERFGSAVPGLPVLMIFPLFSIGASALSLSGYRAFAGREELLHVVGHTQL
                     KGLAVPSEREGLLAAFAD"
     gene            complement(1309..1530)
                     /locus_tag="VF991_21775"
     CDS             complement(1309..1530)
                     /locus_tag="VF991_21775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559138.1"
                     /translation="MVDAFNDPHVAAQELRAHRQTFHGFSKLVLFAILHIGLVLACLA
                     LAFLGNSPLIALILGIGGTAALIAAFAVF"
     gene            1618..2124
                     /locus_tag="VF991_21780"
     CDS             1618..2124
                     /locus_tag="VF991_21780"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9559139.1"
                     /translation="MNAVVAALMALLLVVPPVAAQTSLEADLRAAAAAYERKDMATAA
                     HLWKIWAEKGNAEARTLLGALYWSGEGLPRDHGQAARLYLLAANQGYARAQNDIGFML
                     GFGEGVPPRDDIEAYKWLSLAIEHYTLRNEDRLEQAKRDLASLAARMAPAEIAEAERR
                     AKAWKPVP"
     gene            2331..3761
                     /locus_tag="VF991_21785"
     CDS             2331..3761
                     /locus_tag="VF991_21785"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX9559140.1"
                     /translation="MRGLAQSRLAVRRVRKLSELGGLMKRAWLAAAFAASLLFGSMSA
                     AIAADDMSFDDSCLENARVTEERLLGSAGEAAQFAAYQVFTREIAATGVVTETFDAAL
                     ADAGVPAAAMLEARQALATVIDLGHDMAAGDRFHVRYEQAFTAEGVPIGVGRVLWAEL
                     GTKAKGTVAIHRFRPSGGIERFWLANGEAATPPSMRLPLDVVSVSSGFGLRHDPLDKP
                     SGTMVAMGPLPDQPPSSAAANASAPAPAPAPAPPRQEPVQAKPASRNVVRGGVIAGQF
                     AFGQTTPHAMLDVGRFEREVAKARRAVAPPPVDAPPDTAAAVEQAHVAKPQPAPRARR
                     LFMHDGADLVAWVGTPIYAACDGVVVGAAPNGGYGNWIRIDHPGKLSTVYGHLSEFAP
                     GIEAGVSVSRGELIGFVGNTGRSTGAHLHFEILSSGKAVDPLAYPELKRAQLRGADLE
                     RFRKQVKRALADRDRETAVALSSSGL"
     gene            3888..>4603
                     /locus_tag="VF991_21790"
     CDS             3888..>4603
                     /locus_tag="VF991_21790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559141.1"
                     /translation="MNRASVAAAFAASLCFGSLSAAMAEDACSEEVLAAEQRLLGDAD
                     EAARFAAYQPFTREIAADGVVTESLDASLAQAGVAAATMLEARQALGDAISLERDVRP
                     GDRFHVRYEQTFTAQGAPIGVGRVLWVELRTKAKGTVAIHRFRGFDKSERFWLANGQA
                     ATPPSMRLPLEIISVSSGFGLRADPFDQPPPVSVSGKPAPMGGPKRSASLPPGLPTGG
                     VSGNSPALTANMATPLGAAFG"
BASE COUNT          793 a         1517 c         1606 g          687 t
ORIGIN      
        1 cgtcggcgaa ggcggcaagc aggccctccc gctcgctcgg cacggcaagc cctttgagct
       61 gagtgtgccc gaccacatgc agaagctcct cgcggccggc gaatgcacgg tagcccgaca
      121 ggctgagcgc cgaagcgccg atgctgaaca gcgggaagat catcagcacc ggcaggcccg
      181 gcaccgctga tccgaaacgc tcgcggatct ggtcgtacag caggaaggcg atgacgatgc
      241 cgaccggcag gccgtgcgac tggtggttct gcgacagcac gaagccaccg atcacgacga
      301 tggcggcgac ggcaagcggc aggcgcggcg gggccatgcc gcgccgccac atccaggcgg
      361 cgaccaccac gccggcggca tagggcgcat agccttcgac gctggcgaaa aagttgttga
      421 ggtggaagcc tagactgttg cgcacggcgc cggcggcgct ggcggtctgc aggatgtcga
      481 ccaggtaggc gtggttccac ggcgccaggg cattggcgac caccaggctg ccgaccgcca
      541 accaggccgc cagacgggcc tgaacgtgcg ggcagatcat gatggcaagt ccgagaaagg
      601 cgagcccggc tgcgaagtag gtcaccttca gatagaacag cacggcgagc agcaggccgg
      661 cgttgacgac atcgatctgg tcacgcttga ggcgatcgcg cggcggcagg aacaggatca
      721 gcgccaggat ggaaagcagg ctccagccgt agcggttgta ggacatggcg aaggaatagg
      781 cgttcggctt gtcgccgaca ttggccggca tcagcaccag caggctgacg aagatcacga
      841 acagcgtggc cggcaccagc ggcagacgac gcatcgctgc cgccgtcgcc gaagcgaaaa
      901 cgcccacggc gatgatggtc gctccggcca ggaaggcaaa aggcgttggc ccgaacacct
      961 cgaagccgag ccgggtcagc acgaaattga gcgcgcccac cggctcgtgg aagtcgacgt
     1021 gggcgacatg gccgtggcgc agctgccagg cgccggagag attgtagagg aagtcccagg
     1081 tcatctcgtg cgacagcacg agattggggg agaggagggc ccacatcgcc gccagcacgg
     1141 gcaagccggc cagcagcacg aggccggcga gcgacgtctg aagcgccgag gtccggtcgt
     1201 gtccgcccaa ctcgccgtcg gcaagcgcca taactccctg cctccattga agaaggcgag
     1261 cctagcgttg ccgctgtggc ctacccgcga ccaagctgtg ttcgtgggtc agaagacggc
     1321 gaaagcggcg atcagggcgg ccgtgccgcc gatgcccagg atcagcgcaa tcagcggcga
     1381 attgccgaga aaagccaacg ccaggcaggc cagcaccagc ccgatatgga ggatggcaaa
     1441 cagcacgagc ttgctgaaac catggaaagt ctgccggtgc gcgcgcaatt cctgggcggc
     1501 gacatgagga tcgttaaagg cgtcgaccat gcaatgcctc cctggcgagg attgccggga
     1561 aacgccaatg gtgtggcgag gttgcgcgcg tcggcgcaga cggcgatacc ttcggctatg
     1621 aacgccgtcg ttgccgccct gatggcgctg cttctcgtgg tcccacccgt cgccgcccag
     1681 acgtcgctcg aagccgacct gcgcgccgcc gccgcggcct acgagcgcaa ggatatggcg
     1741 acggcggccc acctttggaa aatttgggcg gaaaagggca atgccgaggc gcgcaccctg
     1801 ctgggcgccc tgtactggag cggcgagggc ctgccgcgcg accatggcca agccgcgcgc
     1861 ctctatctgt tggcggccaa ccagggctat gcccgcgccc agaacgatat cggcttcatg
     1921 ctgggcttcg gcgaaggcgt cccgccgcgc gatgacatcg aggcctacaa atggctgtcg
     1981 ctcgccatcg agcactatac gttgcgcaac gaggaccggc tcgagcaggc gaagagggat
     2041 ctcgccagcc ttgccgcgcg tatggcccca gccgagatcg ccgaggccga acggcgggcg
     2101 aaagcctgga agcccgtacc gtagctgcgc cagaattacg caggcatcgc tttatcatcg
     2161 gagggggctg gcggacgcga cgatttcggc gctaaaaacg cgttcgacga ggcgcgatcg
     2221 cttcgggttg gggtagatcc aggcttttgt gctgaggagc cgctgtgggg cggcttggaa
     2281 atggggcggg gaatcccccg tgtgtggaat atccaggatt gatgcggtcc ttgcgcggcc
     2341 ttgcccagtc gcgcctggcg gtgaggcgcg tccgtaaact gtcggaattg ggggggctca
     2401 tgaagagggc atggcttgcc gcggcgttcg ccgcttcgct gcttttcggc tcgatgtccg
     2461 cggccatcgc cgcggacgat atgtcgttcg acgatagctg tcttgaaaac gcgcgcgtca
     2521 cggaggagcg tctgttgggc tccgccggtg aagccgcgca gttcgccgcc taccaggtct
     2581 tcacgcgcga gatcgccgcg accggcgtcg tcactgaaac gttcgacgca gcgctggccg
     2641 acgcgggcgt gccggcggct gcaatgctcg aagcgcggca ggccctcgcc acggtgatcg
     2701 accttggcca cgacatggcc gccggcgatc gtttccatgt gcgctacgaa caagccttca
     2761 ccgcggaggg cgtgccgatc ggcgtcggcc gcgtgctgtg ggccgaactc ggcaccaagg
     2821 ccaagggcac ggtggccatc catcgcttcc gcccgtcagg cgggatcgag cggttctggc
     2881 tcgcgaacgg ggaggcggca acgccgccgt caatgcgcct gccgctcgac gtggtgagcg
     2941 tctcgtcggg cttcggcctt cggcacgatc cgctcgacaa gccttcggga acgatggtcg
     3001 cgatgggtcc gctgcccgat cagccaccgt cgagcgcggc agcgaacgca agcgcccctg
     3061 cccctgcgcc agcaccagcg ccgccgcggc aggagccggt gcaagcgaag cccgccagcc
     3121 gcaacgtcgt gcgcggcggc gtgatcgccg gacagttcgc cttcgggcag accaccccgc
     3181 atgccatgct cgatgtcggc cggtttgagc gcgaggttgc caaggcccgc cgcgctgttg
     3241 cgccgccgcc tgtcgacgcg ccgcctgaca cggcggcggc cgtcgagcag gcgcacgtcg
     3301 ccaagccgca gcctgcgccg cgcgcgcgcc ggttgttcat gcatgacggc gccgatctcg
     3361 tcgcatgggt cggcacgccg atatacgccg cttgcgacgg cgtcgtggtg ggcgcggcac
     3421 ccaatggcgg ctatggcaac tggatccgga tcgaccatcc gggcaagctc tcgacggtct
     3481 acgggcacct ctccgaattc gcgccgggca tcgaagcggg cgtgtctgta agccggggcg
     3541 agctgatcgg ctttgtcggc aataccggcc gctcgaccgg tgcccacctg catttcgaga
     3601 tcttgagcag cggcaaggcg gtcgatccgc tcgcttatcc ggagctcaag cgcgcgcaac
     3661 tgcgcggcgc cgatctcgaa cgcttccgca agcaggtaaa gcgtgcgctc gccgaccgcg
     3721 accgcgagac ggcggtcgcg ctgtcgtcct ccggcttgtg acagttcgca cctgcagcgc
     3781 aggggggggt ccttcggcgc ggcttaagct atagtttatg taagtcactc tcttgtcact
     3841 atgatcgcac tggcagcggc gaccatacag ggactacaaa aggactcatg aacagggcct
     3901 cggtcgccgc ggcgttcgcc gcttcgctgt gtttcggatc actatccgcc gccatggcag
     3961 aggacgcctg ctcggaggag gtattagccg ccgagcagcg cctgttgggc gatgccgacg
     4021 aggcggcgcg gttcgcagcc taccagccct tcacgcgcga gatcgccgcc gacggcgtcg
     4081 tcaccgaatc gctcgatgcc tcgctcgccc aggccggcgt ggcggcggca acgatgttgg
     4141 aggcgcggca ggcgctgggc gacgcgatca gcctcgagcg cgacgtgcgg cccggcgatc
     4201 gtttccatgt gcgctacgag cagaccttca ccgcccaagg cgcgccgatc ggcgtcggtc
     4261 gcgtgctgtg ggtcgagttg cgcaccaagg ccaagggtac cgtcgccatc catcgcttcc
     4321 gcggcttcga caagagcgag cgcttctggc tggccaatgg ccaagcggcg acgccgccct
     4381 cgatgcgcct gccgctcgag atcatctccg tctcgtcggg cttcgggctg cgcgccgatc
     4441 cgttcgacca gccgccgccg gtctcggtgt ccggcaagcc cgcgccgatg ggcggcccca
     4501 agcgcagcgc ctcgttgccg cccggcctgc cgacgggcgg cgtgagcggc aacagtccgg
     4561 ccctgacggc caacatggcc acgccgctcg gcgccgcgtt cgg
//
LOCUS       DASWGA010000948         3650 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2390828, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000948 DASWGA010000000
VERSION     DASWGA010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3650
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2390828"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..737
                     /locus_tag="VF991_21795"
     CDS             96..737
                     /locus_tag="VF991_21795"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HEX9559142.1"
                     /translation="MTVQAPMPPGRLGGMACCVDFHFDFSSPYGFIAAMKIDEVAKAA
                     CRRLTWRPFLLGAVYKRFGQSPLEHPLKRRYVLEVDVPRVGRRDGLDIKVPMGFPQHS
                     LPAARLFYWIASQAPDKAPEFAKAAYRRYWLDGCSTADPQTAVEVAAGLGFDRQKVEA
                     GMQESSVKLKLTLENEQAIAKGVFGSPFIFVDGEPFWGSDRLDHVAERLAAKD"
     gene            737..1966
                     /locus_tag="VF991_21800"
     CDS             737..1966
                     /locus_tag="VF991_21800"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559143.1"
                     /translation="MRTAVSGARLVAIVCAAQVFVQIGAYFWPALLPGMMQRWSLSNS
                     EAGWITAIFYAAYMVSVPVLVTLTDRIDAKRVYLFGVGCSVAGHLLFGLFADGFWSAM
                     ATRALTGLGWAGTYMTGLKLLADQVDAKMMSRAVTGHAASIGVSGALSFLLGDLIAEH
                     FGWQAAFLLAASTALVAWLAVALTVPGRPPPARPATAPGLFDFRPVLRNRSAMAYAMA
                     YCVHTLEMNALRGWGVAFLAFVAAHTGLSGETLSPTLVVTALALIGTAASVAGNEAAI
                     RFGRRRLVCGAMMLSILVAAMLGIFGTLSYTVAVGLLLVYGLVVWLDSSSLTAGAAGT
                     AEPARRGATLAVHSMLGYGGGFVGPLAVGWTLDLAGGMSPLAWGLAFLVVAVLMALAL
                     AIFVAIRPRELLGDRHG"
     gene            2013..3650
                     /locus_tag="VF991_21805"
     CDS             2013..3650
                     /locus_tag="VF991_21805"
                     /inference="COORDINATES: protein motif:HMM:NF006122.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9559144.1"
                     /translation="MQTLTTAQAVVSMLEVNGIDTIFCLPGVQNDAFFDALYDRTNAI
                     RPIHARHEQACAYMALGYAMASGSPSAYVVVPGPGFLNTTAALSTAYAVNAPVLALTG
                     QIQQAMIGRNVGLLHELPDQLSIMRGLTKWADRIHAPAEAPGLVNEAFRRLLSGRRRP
                     VGLECAMDTWGRRAPVELIATPAKADPCPVDDEAVERAAKLLGSAQRPMIVVGGGAQD
                     AGEPVRAIAEMLDAPVMTGRMGQGVLDGRHKLSVTMPAGYRLWGEADVVLAVGTRMQP
                     QQQNWGMDDALKIIRIDVDSEELDRQRKPEIGIVGDAAVTLKVLADKLGKHNAKRNGR
                     AEVVAETKAAAAKTVRDKLAPQLAYLDAIRKALPDDGILVDELTQMGYAARLAYPTYK
                     PRTFLSPGYQGTLGWGYATSLGAKVAKPDTPVVSISGDGGFLFTAMEMATAAQHGIGV
                     VAVVFSDGAYGNVKRIQQQAFNNRTIASDLRNPDFVKLGESFGIAAERVKSPEELGAA
                     ISRGIARGGPTLIDCPVGELRDPWSLVQVPRNRPRKS"
BASE COUNT          529 a         1252 c         1242 g          627 t
ORIGIN      
        1 ggctgctgcg gcggtccggc gccggccaag gccgacgcct gctgcgtggc cgacgtcgaa
       61 gccaagcagg aaggcaagac gggctgcggc tgcgcatgac ggtacaggcg ccgatgccac
      121 cgggacggct cggcggcatg gcgtgctgtg tcgactttca tttcgacttt tcgtcgccct
      181 atggcttcat cgctgcgatg aagatcgatg aggtggcgaa ggctgcatgt cgtcgcctga
      241 catggcgtcc cttcttgttg ggcgccgtct acaagaggtt cgggcagtcg cccctcgagc
      301 acccgctgaa gcgccgctat gtgcttgaag tggacgtgcc gcgcgtcggc cgacgcgatg
      361 ggctcgacat caaggtgccg atgggctttc cccagcattc gttgcccgcc gcgcgcctct
      421 tctactggat cgcgtcacag gcgccggaca aggcgcccga attcgccaaa gccgcgtatc
      481 gcaggtattg gctcgacggg tgcagcacgg ccgatccgca aacggctgtc gaggtcgcgg
      541 ccggcttggg cttcgaccgc cagaaggtcg aagccggcat gcaggagtcg tccgtgaagc
      601 tcaagctcac cttggagaac gaacaagcca tcgccaaggg cgtcttcggc tcgcccttca
      661 tcttcgtcga tggcgaaccg ttctggggca gcgaccgcct cgatcacgtc gccgagcgcc
      721 tggcagcgaa ggattaatgc gaacggcagt ctcgggcgcc cgcctggtcg cgatcgtctg
      781 cgccgcccag gtcttcgtcc agatcggcgc ctacttctgg ccggccctgt tgcccggcat
      841 gatgcagcgc tggtcgctca gcaacagcga agcgggctgg atcacggcga tcttttatgc
      901 cgcctacatg gtctcggtgc cggtgctggt caccctcacc gaccgcatcg atgccaagcg
      961 cgtctatctg ttcggggtcg gctgctcggt cgccggccat cttctgttcg gcctcttcgc
     1021 cgacggcttc tggtcggcga tggcgacgcg ggcgctcacc ggcttgggct gggccggcac
     1081 ctatatgacc gggctgaaac tgctggccga ccaggtcgac gccaagatga tgtcgcgtgc
     1141 ggtcaccggg cacgccgcca gcatcggcgt gtcgggcgcg ctgtcgtttc tgctgggcga
     1201 cctgatcgcc gagcattttg gctggcaagc ggccttcctg ctcgcggcga gcaccgcgct
     1261 ggtggcgtgg ctcgccgtcg cgctcaccgt gccggggcgt ccgcccccgg cgcggccggc
     1321 cacggccccg ggcttgttcg atttccgccc ggtgctgcgc aatcgctcgg ccatggccta
     1381 tgcgatggcc tattgcgtgc acacgctgga gatgaacgcg ctgcgcggct ggggtgtggc
     1441 gttcctcgcc ttcgtcgcgg cccataccgg cctctccggt gaaaccctgt cgccgaccct
     1501 ggtggtgacg gcgctcgcct tgatcggcac ggcggccagc gtcgccggca atgaagccgc
     1561 gatccgcttc ggccggcgcc ggctggtatg cggcgccatg atgctctcga tcctggtcgc
     1621 ggcgatgctg ggcattttcg gcactctgtc ctacaccgtc gccgtcgggc tgctgctggt
     1681 ctacggtctg gtggtgtggc tcgactcgtc gtcgctgacc gccggtgctg ccggcactgc
     1741 cgagccggcg cgtcgaggcg ccacgctcgc cgtccattcg atgctgggct atggcggcgg
     1801 cttcgtcggc ccgctcgccg tcggctggac gctcgacctc gccggcggaa tgtcgccgct
     1861 cgcctggggg ctcgcctttc tggtcgtcgc cgtgctcatg gccttggcgc tcgcgatctt
     1921 cgtggcgatc cggccgcgcg aacttttagg cgatcgccac ggctgagatt ttcaggttcc
     1981 cgacggcgag ccaaacagca taggctcgtc ccatgcaaac cctcaccacc gctcaagccg
     2041 tcgtgtcgat gctggaagtg aacggcatcg acaccatctt ctgcctgccc ggcgtgcaga
     2101 acgatgcgtt cttcgacgcc ctctacgacc gcaccaacgc catccggccg atccatgccc
     2161 gccacgagca ggcctgcgcc tacatggcgc tgggctatgc gatggcgagc ggcagtccgt
     2221 cggcctatgt cgtggtgccg gggccgggct tcctcaacac cacggcggcg ctgtcgaccg
     2281 cctatgcggt gaatgcaccg gtgctggcgc tcaccggcca gatccagcag gcgatgatcg
     2341 gccgcaatgt cggcctgctg cacgagctgc ccgaccagct ttcgatcatg cgcggcctca
     2401 ccaagtgggc cgaccgcatc catgcgccgg cggaggcgcc gggcctcgta aacgaggcgt
     2461 tccgccgctt gctgtcgggc cgccgccgac cggtcgggct ggaatgcgcc atggacacct
     2521 ggggacggcg cgcgccggtc gaattgatcg caacgccggc aaaggccgac ccctgcccgg
     2581 tcgacgatga ggcggtcgag cgcgcggcca agctgttggg ttcggcgcag cgtccgatga
     2641 tcgtggtcgg cggcggcgcg caggacgcgg gcgagcctgt gcgcgccatc gccgagatgc
     2701 tcgacgcgcc ggtcatgacc ggccgcatgg gccagggcgt tttggacggc cggcacaagc
     2761 tctcggtcac catgccggcc ggctaccgct tgtggggcga ggccgacgtc gtgctggccg
     2821 tcggcacgcg gatgcagccg cagcagcaga actggggcat ggacgatgcg ctgaagatca
     2881 tccgcatcga tgtcgacagc gaggagctcg accgccagcg caagccggag atcggcatcg
     2941 tcggcgacgc cgcggtgacc ttgaaggtgc tggccgacaa gctcggcaag cacaacgcca
     3001 agcgcaacgg ccgcgccgaa gtggtggccg agaccaaggc ggcggcggcc aagaccgtgc
     3061 gcgacaagct cgcgccgcag ctcgcctatc tcgacgccat ccgcaaggcg ctgcccgacg
     3121 acggcatttt agtcgatgag ctgactcaga tgggctacgc cgcccgcctc gcctatccga
     3181 cctacaagcc gcgcacgttc ctctcgccgg gctaccaggg caccttgggc tggggctacg
     3241 ccacgtcgct cggcgcaaag gtcgccaagc ccgacacgcc ggtcgtgtcg atcagcggcg
     3301 acggcggctt cctgttcacc gccatggaga tggcgacggc cgcccagcac ggcatcggcg
     3361 tcgtcgccgt cgtgttcagc gacggcgcct acggcaacgt caagcgcatc cagcagcagg
     3421 ccttcaacaa ccgcaccatc gccagcgacc tgcgcaaccc ggatttcgtc aagctgggcg
     3481 aaagcttcgg catcgcggcg gagagggtga aatcgcctga ggaactcggc gccgcgatct
     3541 cgcgtggcat cgcccggggc ggtccgacgt tgatcgattg cccggtcggc gagcttcgcg
     3601 acccatggtc gctggtccaa gtgccgcgga acaggccgcg caagtcttag
//
LOCUS       DASWGA010000949         4084 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1249432, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000949 DASWGA010000000
VERSION     DASWGA010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4084
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249432"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..928
                     /gene="meaB"
                     /locus_tag="VF991_21810"
     CDS             <1..928
                     /gene="meaB"
                     /locus_tag="VF991_21810"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HEX9559145.1"
                     /translation="RALAQAITLIESTRADHRERADTLLASVLPHTGKSVRLGITGVP
                     GVGKSTFIERFGLSLLERGRSLAVLAIDPSSKRGGGSILGDKTRMEELSRRHAAFIRP
                     SPAGATLGGVARRTREAMLLVEAAGFDTVIVETVGVGQSETAVADMVDMFIVLLLPAG
                     GDDLQGIKRGVIELADLIVVNKADGDFLPAARRAASDYQHALRMLRSPTAGWTPEVTT
                     CSALSGQGVAEIWQTIERFLAAVGEKGIARRRAEQARAWMWNEVGETLLAELRKHPEV
                     KKLVAGLEREVESGRATPAAAARRMLEAFHGR"
     gene            918..1400
                     /locus_tag="VF991_21815"
     CDS             918..1400
                     /locus_tag="VF991_21815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018329562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HEX9559146.1"
                     /translation="MAAKSFLKRARRAAAAQDLPFWQRKTLARMTKQEWESLCDGCGL
                     CCVNKLEYEDTGELAQTDTCCKLLDPKTARCRDYKNRKKIGPDCIQLTPKVVEKMDWL
                     PKTCAYRLVHFRQDLYWWHPLISGDPETVHQAGISARGRVIPEDQVEDISERVVDWFA
                     "
     gene            1514..1819
                     /gene="rpmB"
                     /locus_tag="VF991_21820"
     CDS             1514..1819
                     /gene="rpmB"
                     /locus_tag="VF991_21820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008503607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEX9559147.1"
                     /translation="MPRRCALSGKSVQYGNNVSHANNKTRRRFMSNLQVGSVLSDALG
                     HTVRLRITPRGMKTIEHNGGIDAYLLGTNDSKLSPEMKVLKRRVTSAKAKKDAKTAA"
     gene            complement(1816..2820)
                     /locus_tag="VF991_21825"
     CDS             complement(1816..2820)
                     /locus_tag="VF991_21825"
                     /inference="COORDINATES: protein motif:HMM:NF024841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HEX9559148.1"
                     /translation="MFSALRSLIAFCLLAAACTSASLPPAGAQERPLDIHSSALPFKL
                     DDQAANTVGQLLWRGGISMKANSPRFGGWSDLHVAPDGRSLTSISDEGAWLTATIDYD
                     AKGNLAGLSNARIGPLRGLDGQPLAAKVESDAEGLARLPDGSWLVAFEHHHRLWRYPT
                     LDATPVPFEGPAEIARQPKNGGIETLTALGDGRVIAISEEYSVRPGTVMGWIGEPIQG
                     GRYAWRTFDYATIPDFYPTAIARLPDGSFATIERAFDFVHGVRCRVMRFEASQLKPDG
                     TVRAQELARLAVPYAVDNLEGLAATKGARGETLLWLISDDNFNPLQRNILLLFELTAP
                     "
     gene            complement(2983..>4084)
                     /locus_tag="VF991_21830"
     CDS             complement(2983..>4084)
                     /locus_tag="VF991_21830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HEX9559149.1"
                     /translation="QTEMQMGSGDEEEPGRAERPWLPPGALSNEPLGQQYHAYTVKFD
                     EIVEADHLCDAEELGRLRNHLDQQLSHLQGVIGKLANRLQRRLMAQQNRSWDFDLDEG
                     TLDAARLARIVANPMHALSFKKEKDTTFRDTVVSLLIDNSGSMRGRPITVAAMSADIL
                     ARTLERCGVKVEILGFTTRAWKGGQSREQWLAAGKPANPGRLNDLRHIIYKSADAPWR
                     RARKNLGLMLREGILKENIDGEALLWAHNRLLSRTEERKILMVISDGAPVDDSTLSVN
                     PGNYLERHLRDVIEWIESRSPIELIAIGIGHDVTRYYRRAVTIVDADQLGGTMMEQLA
                     SLFDEEEAKNLRAKAGRRRGTSSGAKSGRRAA"
BASE COUNT          661 a         1357 c         1407 g          659 t
ORIGIN      
        1 ccgcgccctg gcacaggcca tcaccctgat cgagtcgacg cgcgctgacc atcgcgagcg
       61 cgccgacacg ctcctggctt cggtgctgcc gcataccggc aaatcggtgc ggctcggcat
      121 caccggcgtg ccgggcgtcg gcaagtcgac cttcatcgag cgcttcggcc tgtcgctgct
      181 cgagcgcggc cgctcgctcg ccgtgctggc catcgatccc tcgtccaagc gcggcggcgg
      241 ctcgatcctg ggcgacaaga cgcgcatgga ggaactgtcg cgccggcacg ccgccttcat
      301 ccggccctcg ccggcgggcg ccaccctggg cggcgtggcg cggcgcacgc gcgaggcgat
      361 gctgctggtc gaggcggcgg gcttcgacac ggtgatcgtc gagaccgtgg gcgtcggcca
      421 gtccgagacc gcggtcgccg acatggtcga catgttcatc gtcctgctgc tgccggcggg
      481 cggcgacgac ctgcagggca tcaagcgcgg cgtgatcgag ctcgccgacc tgatcgtggt
      541 caacaaggcc gacggcgact ttctgcccgc cgcccgccgc gccgcctcgg actatcagca
      601 tgcgctgcgc atgctgcgct cgcccaccgc tggctggacg cccgaggtca cgacctgctc
      661 ggcgctgagc ggccagggcg tggccgagat ctggcagacc atcgagcgct tcctcgccgc
      721 ggtgggcgag aaggggatcg cccgccggcg cgccgagcag gcccgcgcct ggatgtggaa
      781 cgaggtcggc gagaccctgc tggccgagct gcgcaagcac cccgaggtga aaaagctggt
      841 ggctgggctg gaacgcgagg tcgaaagtgg ccgcgcaacc cccgccgcgg cggcgcgtcg
      901 tatgctagaa gcattccatg gccgctaagt cgttcctcaa acgcgcccgt cgggccgccg
      961 ccgcccagga cctgccgttc tggcagcgca agacgctcgc ccggatgacc aagcaggagt
     1021 gggagtcgct atgcgacggc tgcggcctgt gctgcgtcaa caagctggaa tacgaggaca
     1081 ccggggaact cgcccagacc gacacctgct gcaagcttct ggaccccaag accgcccgct
     1141 gccgggacta caagaatcgc aagaagatcg gcccggactg catccagctc accccaaagg
     1201 tggtggaaaa gatggactgg ctgcccaaga cctgtgctta ccggctggtc catttccgcc
     1261 aggacctcta ttggtggcac cccctgatct cgggcgaccc ggaaaccgtg caccaggcgg
     1321 gaatctcggc ccgcggacgg gtgattcccg aggaccaggt cgaggatatc agcgaacggg
     1381 tggttgattg gttcgcgtaa ccgcgaactg gttcgcgtaa tcgcgaactg gttcgcttga
     1441 cgggcctgct ttcggcccgt aaaaagccgg ccttcccgcc ctcaggcggg atcgtttttt
     1501 agcggatgtc gccatgcctc gtcgttgcgc cctgtcgggc aaatcagtgc aatacggcaa
     1561 caatgtgagc cacgccaaca acaagacccg gcgccggttc atgtccaacc tgcaggtcgg
     1621 ctcggtcctg tccgacgcgc tgggccacac ggtccgcctg cggataacgc cgcgcggcat
     1681 gaagaccatc gagcataatg gcggcatcga tgcctacctg ctcggcacca acgacagcaa
     1741 gctcagcccg gagatgaagg tgctgaagcg ccgcgtcacg tcggccaagg ccaagaagga
     1801 cgcgaagacg gccgcttaag gggccgtgag ctcgaacagc agcagaatgt tgcgctgaag
     1861 cggattgaaa ttgtcgtccg agatcagcca aagcagcgtc tcgccccgcg cccccttggt
     1921 ggcggccaag ccttcgagat tgtcgaccgc atagggcacg gccagccgcg ccaactcttg
     1981 ggcgcgcaca gtgccatccg gtttgagctg tgaggcctcg aaccgcatga cacggcagcg
     2041 cacgccgtgg acaaagtcga aggcccgttc gatggtggcg aatgagccgt cgggcaaccg
     2101 ggcgattgcc gtcggataga agtcgggaat ggtggcgtag tcgaacgtgc gccaggcata
     2161 gcggccgcct tggatcggct cgccgatcca gcccatcacc gtgcctggcc ggacgctgta
     2221 ttcctcgctg atcgcaatga cccggccgtc gcccagcgcc gtcagggttt cgatgccgcc
     2281 gtttttgggc tgacgggcaa tctcggccgg cccttcgaac ggcaccgggg tggcgtcgag
     2341 cgtcgggtag cgccatagcc ggtggtggtg ctcgaaggcg accagccagg acccatcggg
     2401 caggcgcgcc aggccttcgg catcggactc gaccttggct gcgagcggct ggccatcgag
     2461 gccgcgcaac gggccgatcc gggcgttgct cagccccgcc agattgccct tggcgtcgta
     2521 gtcgatggtg gccgtgagcc acgcgccctc gtcggaaatg ctggtgaggc tccgcccgtc
     2581 gggcgcgaca tggaggtccg accagccgcc gaaacggggc gaattggcct tcatcgaaat
     2641 gccgccgcgc cacagcagct ggccgacggt gttggcggct tggtcgtcga gcttgaacgg
     2701 cagcgccgag ctgtggatgt cgagcggccg ctcctgtgcc ccggcgggcg gcagcgacgc
     2761 gctggtgcag gcggcggcga gcaggcagaa cgcgatgaga gaacgaaggg cggaaaacaa
     2821 gatgcgcccg tctagcagac ggccgggtag accgccatgc gtaggatcac tgaggcagcg
     2881 cgcttctcat ggtcttctgg accgcgcgct tccagcgcgc tttcggcgca ttcacatgcg
     2941 cctgaagcgg gccagaggcc cgcggtccgg aagatatgac gcttaagcgg cgcgccggcc
     3001 cgatttggcg ccgctggacg tgccgcgtcg ccggccggcc ttggcccgca ggtttttcgc
     3061 ctcctcctcg tcgaacaagg aggcgagctg ctccatcatc gtgccgccga gctggtcggc
     3121 gtcgacaatg gtgacggcgc ggcggtagta gcgcgtgacg tcgtggccga tgccgatggc
     3181 gatgagctcg atcggcgagc gcgactcgat ccattcgatg acgtcgcgca gatggcgctc
     3241 gaggtagttg ccggggttga ccgacagggt cgaatcgtcg accggcgcgc cgtcggagat
     3301 caccatcagg atcttgcgct cctcggtacg cgacagcagg cggttatgcg cccacaacag
     3361 cgcctcgccg tcgatattct ccttgaggat tccttcgcgc agcatcaggc cgaggttctt
     3421 gcgcgcccgc cgccatggcg catcggccga tttgtagatg atgtggcgca ggtcgttgag
     3481 gcggccggga ttggcgggct tgccggcggc gagccactgc tcgcggctct ggccgccctt
     3541 ccaggcacgc gtggtgaagc ccaggatctc gaccttgacg ccgcagcgct cgagcgtgcg
     3601 ggcgaggatg tcggcgctca tcgccgccac cgtgatcggc cggccgcgca tcgagcccga
     3661 attgtcgatc agcagcgaca ccacggtgtc gcggaaggtg gtgtcctttt ccttcttgaa
     3721 cgacagcgca tgcatgggat tggcgacgat gcgcgccagc cgcgccgcgt cgagcgtgcc
     3781 ctcgtcgagg tcgaaatccc acgaacggtt ctgctgggcc atcaggcggc gctgcaggcg
     3841 gttggcgagc ttgccgatca cgccctgcag gtgcgagagc tgctggtcga gatggttgcg
     3901 cagccggccg agttcctcgg cgtcgcacag atggtcggcc tcgacgatct cgtcgaactt
     3961 caccgtatag gcgtgatact gctggcccag cggctcgttg ctgagcgccc ccggcggcag
     4021 ccacggacgc tcggcgcggc ccggctcctc ctcgtcgccc gagcccatct gcatctcggt
     4081 ctgc
//
LOCUS       DASWGA010000950         3767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2134873, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000950 DASWGA010000000
VERSION     DASWGA010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3767
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2134873"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VF991_21835"
     CDS             <1..613
                     /locus_tag="VF991_21835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003577591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9559150.1"
                     /translation="HPQAFETAAGRHLALSGAALTAAMALALPLALVLVRWHRAAGAV
                     IAAVNVLRTIPSLALLAAALPLLGTGFLPAVIALTLYGLPAILINTHTALGEVDPDVV
                     EAGLGQGMTGRQVMRRIRIPLGLPVIFAGIRTAAVQIVSAATLAAFIGGGGLGELITA
                     GMGTLNIAQLVLGGLAVAALAMATELAFAGIEWSVRRSTGAAA"
     gene            610..1560
                     /locus_tag="VF991_21840"
     CDS             610..1560
                     /locus_tag="VF991_21840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9559151.1"
                     /translation="MIRLEAVSKTFPGAPRPAVDRLDLDVPDGTTCVLIGPSGCGKTT
                     TMRIVNRLIEPSAGRIVVEGQDVTHVDAVELRRRIGYVIQQVGLFPHMTIAQNVATVP
                     QLLGWPSPRIAKRVEEMLSLVGLDPDQFLDRYPRHLSGGQRQRVGVARALAADPPVML
                     MDEPFGAVDPIVRAGLQAELLGILRRLAKTVIFVTHDIDEAIRMGDLIAIMKDGRLVQ
                     CARPETLLSAPKDAFVADFVGADRALKRLTLTTAGEAATPTPAGPGAPVVPAATSLRD
                     VLSLLLACGADAAAVIDVDGTSSGAISLATIRERAAARTS"
     gene            complement(1911..2144)
                     /locus_tag="VF991_21845"
     CDS             complement(1911..2144)
                     /locus_tag="VF991_21845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003213503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559152.1"
                     /translation="MNQRTFLATAAAIFAAGTLATVAHAETVHCGGTNACKGQSACKG
                     ASNACKGQNACKGQGFTETSDQASCTAKGGKVL"
     gene            2369..2845
                     /locus_tag="VF991_21850"
     CDS             2369..2845
                     /locus_tag="VF991_21850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013950438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX9559153.1"
                     /translation="MNGFVTVFYDWSRIVASYLTWAAPLAVRVVVGWVFLWSGWEKLQ
                     VLPRMIENFRSWGIPAPEIVTPFVSGVEFIGGLLLLFGLLTRFAAVPMMIVMLVAILA
                     AKASQIDSLETLLGFEEVSYFVMFAWLAIAGPGPISLDRLVLKALRPDRPAAEYGA"
     gene            2903..3529
                     /locus_tag="VF991_21855"
     CDS             2903..3529
                     /locus_tag="VF991_21855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020096411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9559154.1"
                     /translation="MARLKAFDEDRALDSAVDCFWARGYEATSVRDLAEAMGIGGASL
                     YNAYGDKRELFIRSLERYANRSMRERIARIEARFEPRPAIGAFLAEIVDRSAKDADCK
                     GCLLVNSALDVAPHDAEIGRLVAAYLGEIRAFFKRSLLAARQAGQVHKRLDVDAASAH
                     LLGVMLGIRVLVRTGAKRKLLESVAKPALALLDGAAVPARRKSHIKTK"
     gene            3541..>3767
                     /locus_tag="VF991_21860"
     CDS             3541..>3767
                     /locus_tag="VF991_21860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AhpC/TSA family protein"
                     /protein_id="HEX9559155.1"
                     /translation="MSLEQKLAATRAASAGRIPPDRQAIMHRATEDLRKSGILDRIVP
                     VGGRAPAFELANHDGRRVASAELLAGGPMVLS"
BASE COUNT          543 a         1309 c         1265 g          650 t
ORIGIN      
        1 ccacccgcag gccttcgaaa ccgcggccgg ccggcatctc gccctctcag gtgcggccct
       61 gaccgcggcc atggcgctgg ccttgccgct ggcgctcgtg ctggtgcgct ggcaccgcgc
      121 ggcgggggcg gtgatcgccg cggtcaacgt gctgcgcacg atccccagcc tcgccttgct
      181 ggccgccgcc ctgccgctgc tcggcaccgg cttcctgccc gccgtcatcg cgctcacgct
      241 ctacggcctg ccggcgatcc tcatcaacac ccatactgcg ctcggagagg tcgatcccga
      301 cgtggtcgag gccgggctcg gacaaggcat gaccggtcgc caggtcatgc gccgcatcag
      361 gattccgctc ggcctgcccg tgatcttcgc cggcatccgc acggccgccg tgcagatcgt
      421 gtcggccgcg acgctggcgg ccttcatcgg cggcggcggg ctgggcgagc tgatcaccgc
      481 cggcatgggc acgctcaaca tcgcccagct cgtgctcggc ggcctggcgg tggcggcgct
      541 ggcgatggcg accgagcttg ctttcgccgg tatcgaatgg agcgtccgcc gctcgacagg
      601 ggccgcggca tgatccggct cgaggctgtc agcaagacct tccccggcgc gccgcggccg
      661 gcggtcgatc ggctcgatct cgacgtgccc gacggcacga cctgcgtgct gatcggaccg
      721 tcgggctgcg gcaagaccac gaccatgcgc atcgtcaacc ggctgatcga gcccagcgcc
      781 ggtcgtatcg tcgtcgaggg ccaggacgtc acgcacgtcg acgccgtcga gctgcgccgc
      841 cgcatcggct acgtcatcca gcaggtcggc ctgtttccgc acatgacgat cgcccagaac
      901 gtcgcgaccg tgccgcagct cctgggctgg cccagcccgc gcattgccaa gcgagtcgag
      961 gagatgctgt cgctggtcgg gctcgatccc gaccagttcc ttgaccgcta tccgcgccac
     1021 ctgtcgggcg ggcagcgcca gcgggtcggc gtggcgcgcg cgctcgccgc cgacccgccg
     1081 gtcatgctga tggacgagcc gttcggcgcg gtcgacccga tcgtgcgggc ggggctgcag
     1141 gccgagctgc tcggcatttt gcgccgcctt gccaagaccg tgatcttcgt cacccatgac
     1201 atcgacgaag cgattcgcat gggcgacctg atcgccatca tgaaggacgg acggctggtg
     1261 caatgcgccc gtcccgagac gcttctctcg gcaccgaaag acgccttcgt cgccgatttc
     1321 gtgggcgccg accgggcgct caagcgcctc acgctgacga cagcgggtga ggcggcgaca
     1381 ccgacaccgg ccggccccgg tgcgcctgtc gtgccggcgg caacctcgct gcgcgatgtc
     1441 ctctcgctgc tgctggcttg cggcgccgac gctgctgcgg tcatcgatgt cgacggcaca
     1501 tcctccggcg ccatctcgct ggcgacgatt cgcgagcggg cggcggcccg gacgtcctga
     1561 gggctttctc cttcaaaacg cgacggtgtg gcggatcggg aagccgccca gcaactccgc
     1621 gcaccgcttc acgatcgctt cccgcggcgc gccggacggt gcggtgacct gcaccgccgc
     1681 cagcatgcca tgggtgggat cgtcgcggac cgtgacggca gccgtcgtcc cctcctcccg
     1741 cagcggcgcg atggccgcct cggcgcgttc gcgccggttc tgccggcgcc gctcctacaa
     1801 gttatggccg aaaacgccgt cgaaggccgg tctgcggggg agcgactgcc ttcgacggcg
     1861 ccggcggcag gtcgtggggc agatctcgac ctgccgtttt aaaagtgagg ctagaggacc
     1921 ttgccgccct tggccgtgca agacgcctgg tccgacgttt cggtaaagcc ctgacccttg
     1981 caggcgttct ggcccttgca ggcgttagac gcgcccttgc aggcactctg gcccttgcag
     2041 gcattggtgc cgccacagtg gacggtctcg gcatgagcaa ccgtggcgag cgtgccggcg
     2101 gcgaagatcg ccgcggccgt agcgaggaac gtacgctggt tcatgtgaca gtctccctaa
     2161 gctggctgtg cgtgcgtccg aatggacgct cgcccaacct acggccgtcg atcgcccacg
     2221 ggccagtcaa ggttaggcga tcaaatacac acgccgggta aagaatcagt gaggttggtt
     2281 attttggatc gactgctcca caatcatgct tgacagcatt tttggcatgc aacaattgtc
     2341 gcccatgagc aacccaggga aagccgacat gaacgggttc gtcacggtgt tttatgactg
     2401 gtcgcggatc gtcgcgagtt acctgacgtg ggcagcaccg ctcgccgtgc gcgtcgtcgt
     2461 gggctgggtc tttctgtgga gcggctggga gaagctgcag gtcctgccgc gcatgatcga
     2521 gaacttcaga agctggggca ttccggcgcc cgagatcgtc acgccgttcg tgtcgggcgt
     2581 ggagtttatc ggcggccttt tgctgctgtt cggcctgctc acccgcttcg ccgcggtgcc
     2641 gatgatgatc gtcatgctgg tcgcgatcct ggccgccaag gccagccaga tcgattcgct
     2701 cgaaaccctg ctcggcttcg aggaggtctc ctacttcgtc atgttcgcct ggctcgccat
     2761 cgccggtccc ggtccgatct cgctcgatcg cctggtgctc aaggcccttc gtcccgaccg
     2821 gcctgccgcg gagtatggag cgtaatgcgg ctgaggtgtc ctattttgta gcattcgatc
     2881 aagaaatatg gtcgactgcg acatggcccg cctgaaagcc ttcgacgaag atcgcgccct
     2941 tgactccgcc gtcgattgct tctgggcgcg cggctacgag gcgacctcgg tgcgcgacct
     3001 cgccgaggcg atgggcatcg gcggcgccag cctctacaac gcctacggcg acaagcgcga
     3061 actgttcatc cgctcgctgg aacgctacgc caaccgctcg atgcgcgaga ggatcgcgcg
     3121 gatcgaggcc cggttcgagc ccaggccggc gatcggcgct ttcctggccg agatcgtcga
     3181 ccgctcggcg aaggacgccg actgcaaggg ctgcctgctg gtcaactccg cgctcgacgt
     3241 ggcgccgcac gatgccgaga tcggccggct ggtggcggcc tatctgggcg agatacgcgc
     3301 cttcttcaaa cgcagccttt tggcggcgcg gcaggcgggc caggtgcaca agcgtctcga
     3361 cgtcgacgcg gcgtcggccc atctgctggg cgtgatgctg ggcatccgcg tgctggtgcg
     3421 caccggcgcc aagcgcaagc tgctggagag cgtggccaag cccgccctcg ccctgctcga
     3481 tggcgcggcg gtgcccgcgc ggcgcaaaag tcatatcaaa accaagtgaa ggagtgatcg
     3541 atgtccctcg agcaaaagct ggccgccacc cgcgccgcct ccgccggccg catcccgccc
     3601 gaccgccagg cgatcatgca ccgcgcgacc gaggatctgc gcaagtcggg cattctcgac
     3661 cgcatcgtgc cggtcggtgg ccgggcgccg gcgttcgagc tcgccaacca cgatggtcgc
     3721 cgtgtcgcct cagccgagct cctcgccggc gggccgatgg tgctgtc
//
LOCUS       DASWGA010000951         2938 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1367678, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000951 DASWGA010000000
VERSION     DASWGA010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2938
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1367678"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(183..1154)
                     /locus_tag="VF991_21865"
     CDS             complement(183..1154)
                     /locus_tag="VF991_21865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007754613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HEX9559156.1"
                     /translation="MPTSRNYTLRNKRVWVAGDRGLVGSALVRRLQGEGCEIVKAPRE
                     AVDLRRPDQVERWMADAKPQAVFLAAARVGGIYANDTRPAEFIYDNLMIQSNVVEACR
                     RAGVEKLMLLGSSCIYPRLAPQPIPESALLTGPLEPTNQWYAVAKIAGIKLGQAYRRQ
                     YGCDFISVMPTNLYGPGDNFDLMQSHVVPALLVKAHAAMRARAPAIEVWGTGAVRREF
                     LYVDDAADGMVFLMQNYSDEAIVNLGPGSDVSIVDLVGLICKVVGYQGGVKFDASRPD
                     GVPRKMVDTSFAASLGWKPRTSLREGLAATYRWYVDNVVPERQRAVA"
     gene            complement(1120..2208)
                     /gene="gmd"
                     /locus_tag="VF991_21870"
     CDS             complement(1120..2208)
                     /gene="gmd"
                     /locus_tag="VF991_21870"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006199483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEX9559157.1"
                     /translation="MSSKVALITGITGQDGAYLADFLLSQGYIVHGIKRRSSLLNTER
                     IDYLYRDRHDAGVRLFLHYGDMTDSTNLLRLLGEVKPTEVYNLAAQSHVQVSFETPEY
                     TANTDALGTLRLLEAIRILSMNDDVRFYQASTSELFGKVQETPQRELTPFYPRSPYAV
                     AKLYAYWITVNYREAYGMHASNGILFNHESPIRGETFVTRKITRAVAAIERGYQDCLY
                     LGNIDAKRDWGHARDYVEGMWRILQQDEPDDYVLATGETHTVREFVELAFHHIGRPIV
                     WRGAGDGEQGCCRRSGRVLVAIDGAYRRPTEVDLLLGDPAKALSKLGWRHRTSFAELV
                     AEMVEADRLVMKRMGANNAYEPKLYAAQ"
     gene            complement(2235..>2938)
                     /locus_tag="VF991_21875"
     CDS             complement(2235..>2938)
                     /locus_tag="VF991_21875"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9559158.1"
                     /translation="FSKRAKAAFDRAEREALCGLAHVFTFGAYVRDNLIGHYGLPTDR
                     VTVVGSGMGAIEPYDGPKAYDKPTLMFVAKHLFQAKGGILLLEAFELARRRRPDLSLT
                     IVGDERSRAFVGDRPGITFRAYLPWQALQQLYRDTTLLVQPMLNDPWGQVYLEAMASR
                     TPVMGLNRNGLPEIVDGGRHGFLVDRADPAALAEAILCAVSDPQRLERMATAAQRHVL
                     QNYSWNRVAERIAYS"
BASE COUNT          511 a          943 c          988 g          496 t
ORIGIN      
        1 tgccgagcga ggcgaccatg gcgagcaggc cgaaggcaaa tggcggcagc agccgcgcca
       61 ggacgaccag ggttgccact tgtccgagca cgcgaatcgc ctgcgccgcc agaaggatcg
      121 ctccgccgcg gcgggacctg cgcccgatgt cctcgatcag gtggtcggtg gcgaacgccg
      181 cctcaggcga cggcgcgttg tctctcggga acgacgttgt caacgtacca ccggtaggtc
      241 gcggccagcc cctcgcgcaa cgaggtgcgc ggcttccagc cgagggatgc ggcgaacgac
      301 gtatccacca tcttgcgcgg cacgccgtcg ggacggctgg catcgaactt cacgccgccc
      361 tggtagccca cgaccttgca gatcaagccg acgagatcga cgatcgacac gtcggaaccg
      421 gggccgagat tgacgatcgc ctcgtcggaa tagttctgca tcaggaacac catgccgtcc
      481 gcggcatcgt cgacatagag gaactcccgg cgcaccgcgc cggtgcccca gacctcgatg
      541 gccggcgcgc gggcgcgcat ggccgcatgc gccttgacca gcagcgccgg cacgacatgg
      601 ctttgcatga ggtcgaaatt gtcgccggga ccgtacaggt tggtcggcat gaccgagatg
      661 aaatcgcagc catattgccg gcgataggcc tggccgagct tgatgccggc gatcttggcc
      721 accgcatacc attgattggt cggttcgagc ggcccggtga gcagcgccga ttcgggaatc
      781 ggctggggcg ccagccgcgg atagatgcag gacgagccga gcagcatcag cttctcgaca
      841 ccggcccgtc ggcaggcctc gacgacgttg ctctggatca tcaggttgtc gtagatgaat
      901 tcggccggcc gcgtgtcgtt ggcatagatg ccaccgaccc gcgcggcggc gaggaatacc
      961 gcctgcggct tggcgtcggc catccagcgt tcgacctgat cgggacggcg caaatccacc
     1021 gcctcgcgtg gcgccttgac gatctcgcag ccttcgcctt gcagtcggcg gacgagcgcg
     1081 ctgccgacca ggccgcggtc gccggcgacc cagacccgct tattgcgcag cgtatagttt
     1141 cggctcgtag gcattattgg ctcccattct cttcatcacc aagcgatcgg cttcgaccat
     1201 ttcggccacc agctcggcga aactcgtacg atgccgccag ccgagcttgc tcagggcctt
     1261 ggcgggatca ccaagcaaca ggtcgacttc ggtcggccgc cggtaggcgc cgtcgatcgc
     1321 gaccagcacc cggccggagc gccggcagca accctgctcg ccgtcgccgg caccgcgcca
     1381 cacgatcgga cggccgatgt gatggaaggc aagctcgacg aattcccgca cggtatgcgt
     1441 ctcgccggtc gccagcacgt aatcgtcggg ctcgtcctgc tgcaggatcc gccacatgcc
     1501 ttcgacatag tcgcgggcat ggccccagtc gcgcttggcg tcgatgttgc cgagatagag
     1561 acagtcctgg tagccgcgct cgatggcagc caccgcgcgc gtgatcttgc gcgtgacgaa
     1621 ggtctcgccg cggatcggcg attcgtggtt gaacaggatg ccgttggagg catgcatgcc
     1681 ataggcttcg cggtagttga ccgtgatcca gtaggcatag agcttggcca ccgcataggg
     1741 gctgcgcgga tagaacggcg tcagctcgcg ctgcggcgtc tcctgcacct tgccgaacag
     1801 ctccgaggtc gaggcctgat agaagcgcac gtcgtcgttc atgctgagga tgcggatcgc
     1861 ctcgagcagg cgcaaggtgc ccagcgcatc ggtgttggcg gtgtattccg gcgtctcgaa
     1921 actgacctgc acgtggcttt gcgccgcgag gttgtagacc tccgtcggct tgacctcgcc
     1981 gagcagcctg agaaggttcg tcgagtccgt catgtcgccg taatgcagga aaagcctgac
     2041 gccggcgtcg tggcggtcgc gatagaggta atcgatgcgc tcggtgttca acagcgagga
     2101 acggcgcttg atgccgtgca cgatatagcc ctgcgacagc aggaaatcgg cgagataggc
     2161 gccatcctga ccggtgatcc cggtaatgag cgcgacttta ctggacatat gccgaccttt
     2221 cgattgctga gccgtcagga ataggcgatc cgttcggcca cccggttcca cgagtagttc
     2281 tgcaagacat ggcgctgggc ggccgtcgcc atgcgctcga gtcgctgcgg gtcggagacg
     2341 gcgcacagga tggcttcggc gagcgctgcc ggatcggcgc gatcgaccag gaagccatgc
     2401 cgcccgccgt cgacgatttc cggcaagccg ttgcggttga gacccatcac gggcgtgcgc
     2461 gacgccatgg cctcgagata gacctggccc cacgggtcgt tcagcatcgg ctgaaccagc
     2521 agggtggtgt cgcgatagag ctgctgcagc gcctgccacg gaagataggc gcggaacgtg
     2581 atgccgggcc ggtcgccgac aaaggcgcgg ctacgttcgt cgccgacgat ggtcaggctg
     2641 agatccggcc gtcgccggcg cgccagttcg aacgcctcga gcagcaggat gccgcccttg
     2701 gcctggaaca ggtgcttggc gacgaacatc agcgtcggct tgtcataggc cttcggtccg
     2761 tcgtacggct cgatggcgcc catgccggag ccgacgacgg tgacgcggtc ggtcggcagt
     2821 ccgtagtgcc cgatcaggtt gtcgcgcacg taggcaccga acgtgaagac atgggcaagc
     2881 ccgcacagcg cttcgcgctc ggcgcgatcg aaggccgcct tggcccgctt gctgaatc
//
LOCUS       DASWGA010000952         2631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2135123, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000952 DASWGA010000000
VERSION     DASWGA010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2135123"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VF991_21880"
     CDS             <1..276
                     /locus_tag="VF991_21880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX9559159.1"
                     /translation="KQCRMLRSAFTEAWNEPGAPPALPMPLQSMLVGEARARIERARN
                     KDYMTYYVGQIVGDMREETSVRGVIRDMLEELADTCERFERQLGGGS"
     gene            273..1493
                     /locus_tag="VF991_21885"
     CDS             273..1493
                     /locus_tag="VF991_21885"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX9559160.1"
                     /translation="MNPSPRPLAGIRVADFSSMIAGPYCSRLLADCGAEVLKIEERTG
                     DHMRTGRPLRDGHSAYFGHLNCGKKSLAIDLKAPEGRAIAADLVLASDVVLENYRPGV
                     MKRLGLDYGGLAKRRPELIYCSISGFGQSGPRAGQPAYAPVVHAASGFDHTQFAYQDG
                     QDRPAKTGIFVADVLAAVYAFGAIQTALIGRLRHGIGQFIDVALMDSMINLLIFECQE
                     AQFPGDVQRHLYVPLPARDGFVIVAPISQRNFEQLADAIGHPEWKTDARFATAQGRST
                     HWTLLMDEVECWTRKRPARECEDTLMAAGVPCSRYLTVAEAIGDPQTLSRGTMATVKD
                     AAGPFLVPNPPFKFADGSVGAQSEVPLLGQDTRTVLADILKMDAGQIERLVERSVLGA
                     PQMVPTSGWAATAQ"
     gene            complement(1462..>2631)
                     /locus_tag="VF991_21890"
     CDS             complement(1462..>2631)
                     /locus_tag="VF991_21890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX9559161.1"
                     /translation="PALKLVGQTSMRTVTDYQFGVIPMFLLMGAFVSNSGVSRELFRA
                     ANTFVGHLRGGLGLATIVSCGGFAAISGSSVATAATFSTVAYPEMRRYGYPQSFATGV
                     IAAGGTLGAMLPPSTVLAVYGLITQQDIGKLFMAGILPGLLAMTMYMATIAVICRAKP
                     DFLPIAAKASWAERLEGLRDVWAPVVLFVFVIGGLYGGVFTPTEAGGVGAAGAFLLGL
                     LRGRLGRAEIRASLLQATRTAAAVFTVLIGALLFGYFLTITQVPQKVTEFLTGLGIGA
                     YGVLALIMVMYLILGCLMDAMAMIILTVPIIFPLVTALGFDPIWFGVIIVMTVELGLI
                     HPPVGMNVFVIKSVVQDVSFASIFKGVLPFIATDILRLVILIAFPVIALWLPNQM"
BASE COUNT          474 a          879 c          896 g          382 t
ORIGIN      
        1 aagcagtgcc gcatgctgcg cagcgccttc accgaggcgt ggaacgagcc cggcgcgccg
       61 ccggcgctgc cgatgccgtt gcagtcgatg ctggtcggcg aagcgcgcgc ccgcatcgag
      121 cgcgcccgca acaaggacta catgacctac tatgtcggcc agatcgtcgg cgacatgcgc
      181 gaggagacct cggtgcgcgg cgtcatccgc gacatgctgg aggaactcgc cgacacctgc
      241 gagcgcttcg agcgccagct tggcggcggc tcatgaatcc ctccccccgc ccgctcgccg
      301 gcatccgcgt cgccgatttc agcagcatga tcgccggccc ctactgctcg cgcctgctgg
      361 ccgattgcgg cgccgaagtg ctgaagatcg aggaacgcac gggcgatcac atgcgcaccg
      421 gccggccgct gcgcgacggg cacagcgcct atttcggcca tctcaactgc ggcaagaaga
      481 gtctcgccat cgatctgaag gcgccggagg gccgcgccat cgccgccgac ctcgtgttgg
      541 caagcgacgt cgtgctggag aattaccggc ccggcgtgat gaagcggctc ggcctcgact
      601 atggcgggct ggccaagcgg cggcccgagc tcatctactg ctcgatctcg ggcttcggcc
      661 aatcggggcc gcgcgccggc cagcccgcct acgcccccgt ggtgcatgcc gccagcggct
      721 tcgaccacac gcaattcgcc tatcaggacg gccaggaccg cccggccaag accggcatct
      781 tcgtcgccga cgtgctggcc gcggtctatg ccttcggcgc gatccagacg gcgctgatcg
      841 ggcggctgcg tcacggcatc ggccagttca tcgacgtggc gttgatggat tcgatgatca
      901 atctcctgat cttcgagtgc caggaggcgc agtttcccgg cgacgttcag cgccatctct
      961 atgtgccgct gccggcgcgc gacggcttcg tcatcgtggc gccgatcagc cagcgcaatt
     1021 tcgaacagct tgccgacgcc atcggccatc cggagtggaa gaccgacgca cgtttcgcca
     1081 cggcgcaggg acgctccacc cactggaccc tgctgatgga cgaggtcgag tgctggacca
     1141 ggaagcggcc ggcgcgggaa tgcgaggaca cgctgatggc ggcgggcgtg ccgtgctcgc
     1201 gctatctcac ggtggccgag gcgatcggtg atccgcagac gctctcccgc ggcacgatgg
     1261 cgacggtgaa ggacgccgcc ggtccgttcc tggtgcccaa tccacccttc aagttcgccg
     1321 acggctcggt gggcgcgcag tccgaggttc cgctgctggg ccaggatacg cgaaccgtgc
     1381 tggccgatat cctgaagatg gatgccggcc agatcgagcg gcttgtcgag cgatccgtgc
     1441 tcggtgcgcc acagatggtg cctacatctg gttgggcagc cacagcgcaa tgacgggaaa
     1501 ggcgatcagg atcaccagcc gcaggatgtc ggtggcgatg aagggcagca cgcccttgaa
     1561 gatcgacgcg aagctcacat cctgcacgac gctcttgatg acgaacacgt tcatgccgac
     1621 cggtggatgg atcagcccga gctcgacggt catgacgatg atcacgccga accagatcgg
     1681 gtcgaagccc aacgcggtca ccagcgggaa gatgatgggc acggtgagga tgatcatcgc
     1741 catggcgtcc atcaggcagc ccaggatcaa gtacatgacc atgatcaggg cgagcacgcc
     1801 gtaggcgccg atgccgaggc cggttaaaaa ctccgtcacc ttctgcggca cctgggtgat
     1861 ggtgaggaaa tagccgaaca acagcgcgcc gatcagcacg gtgaacaccg ccgccgcggt
     1921 gcgcgtggcc tgcagcagcg aggcgcggat ctcggcgcgg cccagccgcc cgcgcaggag
     1981 gccgagcagg aaggcgccgg ccgcgccgac accgcccgct tcggtcggcg tgaagacgcc
     2041 gccgtagagc ccgccgatca cgaacacgaa cagcaccacc ggcgcccaga cgtcgcgcaa
     2101 gccctccaac cgctcggccc acgacgcctt ggcggcgatc ggcaggaaat cgggtttcgc
     2161 ccggcagatc accgcgatcg tggccatgta catggtcatg gctagcaggc cgggcaggat
     2221 gccggccatg aagagcttgc cgatatcctg ctgggtgatg aggccgtaga cggcgagcac
     2281 ggtcgagggc ggcagcatgg cgcccaaggt gccgccggcc gcgatcacgc cggtggcgaa
     2341 gctttgcgga tagccgtagc ggcgcatctc gggataggcc accgtcgaga aggtggcggc
     2401 ggtcgccacc gacgagcccg agatcgccgc gaagccgccg cacgagacga tggtggcgag
     2461 gcccagccca ccgcgcaaat gtccgacgaa ggtgttggcg gcacggaaca gctcgcggct
     2521 gacgccggag ttcgacacga aggcgcccat cagcaggaac atcgggatga cgccgaactg
     2581 gtagtcggtg accgtgcgca tcgacgtctg gccgaccagt ttcagcgccg g
//
LOCUS       DASWGA010000953         5250 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1509925, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000953 DASWGA010000000
VERSION     DASWGA010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5250
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1509925"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VF991_21895"
     CDS             complement(<1..393)
                     /locus_tag="VF991_21895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9559162.1"
                     /translation="MFDLSGKAALVTGASGGIGGAIARALHRQGATVTLSGTRADALE
                     QLKSSLGERAHVVAARMDDAADIDRLAKEAEAAMGKLDILVNNAGITRDNISMRMKDE
                     EWEKVLQVNLTGTFRLTRAAMRGMMRRRF"
     gene            complement(531..1472)
                     /gene="fabD"
                     /locus_tag="VF991_21900"
     CDS             complement(531..1472)
                     /gene="fabD"
                     /locus_tag="VF991_21900"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEX9559163.1"
                     /translation="MSRAFVFPGQGSQAVGMGSDLAGAFATARDVFQEVDEALQQNLS
                     KLMREGPESELVLTENAQPALMAVSMAVARILEKDGGKPLSSLASHVAGHSLGEYSAL
                     AAAGALQLADTARLLKLRGQSMQKAVPVGVGAMAALLGIELEPAQEACKEAALGEVVA
                     VANDNGGGQVVVSGHKDAVERTIEVAKTKGAKRGMLLPVSAPFHCPLMQPAADAMKAA
                     LETVSLATPRVPLVANVLAAEVTEPGAIKQRLVEQVTGLVRWRESVQYMKSQHVEMLV
                     ECGSGKVLSGLVRRIDKDMTGLALNTPADIEAFLKTA"
     gene            1750..2199
                     /gene="rpsF"
                     /locus_tag="VF991_21905"
     CDS             1750..2199
                     /gene="rpsF"
                     /locus_tag="VF991_21905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEX9559164.1"
                     /translation="MALYENVFIARQDVPTTQVETLTNQFAELVTGLGGTVSKKEYWG
                     LRSLTYRIKKNRKGHYTLLNIDAPSAAVKELERTMSINEDIIRFLTVRVDALEEGPSA
                     IMIRSAEKSDRPGGDRGDRWGDRPPRRERPRFGDEVAPIAAVAGEEE"
     gene            2196..2429
                     /gene="rpsR"
                     /locus_tag="VF991_21910"
     CDS             2196..2429
                     /gene="rpsR"
                     /locus_tag="VF991_21910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016917696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEX9559165.1"
                     /translation="MSAQRRPFTRRRKSCPFSGANAPKIDYKDVRLLQRFVSERGKIV
                     PSRISAVSSKKQRELAQAIKRARFLALLPYLIA"
     gene            2445..3101
                     /gene="rplI"
                     /locus_tag="VF991_21915"
     CDS             2445..3101
                     /gene="rplI"
                     /locus_tag="VF991_21915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEX9559166.1"
                     /translation="MPINVILLERVPKLGQMGDVVKVKPGFARNYLLPQKKALRATKD
                     NITYFESQRKTLEAQNLERRQEAEAVAGKMSDLKVTLIRQASEALQLYGSVTSRDIAD
                     AADAQGVKLERGQVELDKPIKSLGAHKIKIHLHPEVTVEITALVGRSPDEAEFLAKGG
                     TLVAETERAQLEAAEAARRAAEQAAALFEAKSVQANKPAEGETAEAAAATGEEPAEKS
                     "
     gene            3348..4589
                     /locus_tag="VF991_21920"
     CDS             3348..4589
                     /locus_tag="VF991_21920"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008594386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEX9559167.1"
                     /translation="MLLARVLAPVLGEGQLTIIDEAGRLHRIEGPRAGPSVTLRIHTW
                     WTGMRLALRPRLALGEAYMDGTLTVEEGSDIYDLLDLIGRNITALEATPMVRLSFTVQ
                     RWLRVLEQYNPIGRAQRNVAHHYDLKDQLYDFFLDRDRQYSCAYFKTGEEPLEQAQLD
                     KKRHIAAKLLLQPGQRVLDIGSGWGGMGLFLSQQFGVDVTGVTLSKEQHAVSSRRALE
                     GGIADKVRFKLLDYRREPGRYDRIVSVGMFEHVGVAHYVEFFTKVKELLTDDGVMLLH
                     AIGRMEPPGATNTWLGKYIFPGGYTPAMSEVLAAIEKVGLWVTDIEVLRLHYAETLRH
                     WRHRFLANREKIKQMAGYDDRFCRMWEFYLAGCEVAFRYMHQMVFQIQLARRQDAVPL
                     TRHYLIDAENSIAAPRSIAAE"
     gene            4838..5080
                     /locus_tag="VF991_21925"
                     /pseudo
     CDS             4838..5080
                     /locus_tag="VF991_21925"
                     /inference="COORDINATES: protein motif:HMM:NF012974.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
BASE COUNT          941 a         1776 c         1624 g          909 t
ORIGIN      
        1 gaagcggcgc cgcatcatgc cgcgcatcgc cgcgcgcgtc aggcggaacg tgccggtgag
       61 gttgacctgc agcaccttct cccactcctc gtccttcatg cgcatggaga tgttgtcgcg
      121 cgtgatgccg gcgttgttca ccaggatgtc gagcttgccc atggccgcct cggcttcctt
      181 ggccaggcgg tcgatgtcgg ccgcatcgtc cattcgtgcg gcaaccacat gggcgcgttc
      241 gcccagcgaa gacttgagct gctccagggc atcggcccgt gtccccgaaa gcgtgacggt
      301 ggcgccctgc ctgtgcagcg cgcgggcaat ggcgccaccg atgccgcccg atgcgcctgt
      361 caccaatgca gctttgccgg aaagatcgaa catctggtct ccttaatcag tcctcctctc
      421 ccccgctagg gggagaggtt gggtgagggg gatgcgcacg tcgttgcccc ctcacctagc
      481 ctctcccccc agcgggggag aggaatatga gttgtgttag ccgccatccc ctatgccgtc
      541 ttgaggaagg cttcgatgtc ggccggcgtg ttgagcgcca gccctgtcat gtccttgtcg
      601 atgcgcctga ccagccccga cagcaccttg ccggagccgc attcgaccag catctcgacg
      661 tgctgcgatt tcatgtattg cacgctttcg cgccaacgca cgaggccggt cacctgttcc
      721 accagccgct gcttgatggc gccaggctcc gtgacttcgg cagccagcac attggcgacc
      781 agcggcacgc gcggcgtcgc cagcgacacg gtttcgagcg cggccttcat cgcgtcggcg
      841 gcgggctgca tcaacggaca atgaaagggc gcgctcaccg gcaacagcat gccgcgcttg
      901 gcacctttgg tcttggcgac ttcgatggtc cgctcgacgg cgtccttgtg gccgctcacc
      961 acgacctggc cgccgccatt gtcgttggcg accgcgacca cctcgccgag ggctgcttcc
     1021 ttgcaggcct cctgggcggg ctcgagctcg atgccgagca gggccgccat ggcgccgacg
     1081 ccgaccggca cggccttctg catggactgc ccgcgcagct tcaacagccg cgcggtgtct
     1141 gcgagttgca gggcaccggc tgccgccagg gcggagtatt cgccgagcga atggccggcg
     1201 acatggctgg ccaggctgga caagggcttg ccgccatcct tttccaggat ccgcgccacg
     1261 gccatgctga cggccatcaa ggcgggctgc gcgttctcgg tcaggacgag ctcggattcg
     1321 ggcccttcgc gcatcaattt cgacagattc tgctgcagcg cctcgtcgac ttcctggaag
     1381 acatcgcgcg ccgtggcgaa cgccccggcg aggtcggatc ccatgccgac ggcttgggaa
     1441 ccctgtccgg gaaagacgaa agcgcgactc atgggccgat ttccccctgt ttctggccgc
     1501 aagcgggcct ctccataccc cactcacggc gcggccggaa cgccttgatt ttaggggatt
     1561 tgcctgtata accgccgctc ttcgggacct cagtcgattc cgatctcctt gccgatccaa
     1621 gccttgcgcg ccaagcgttg aggaaagggc cggctagatc cgggcggttg ccggtcgagc
     1681 cattgctcat gacgagtgat ggcgcgacga acgccgggtc atcaacagcc ataaggagcc
     1741 gatagttaca tggcactcta cgaaaacgtc ttcattgcgc gtcaggacgt cccgacgacg
     1801 caggtggaga cactcaccaa ccagttcgcc gaactggtca cgggtctggg cggcaccgtc
     1861 tccaagaagg agtactgggg gctgcgctcg ctcacctacc gcatcaagaa gaaccgcaag
     1921 ggccactaca ccctgctcaa catcgacgcc ccatcggcgg cggtgaagga gctggagcgc
     1981 acgatgtcga tcaacgagga catcatccgc ttcctcaccg tgcgcgtcga tgcgctcgag
     2041 gaaggcccgt cggccatcat gattcgcagc gccgagaaat cggatcgtcc gggtggcgat
     2101 cgcggcgacc gctggggcga ccgcccgccg cgccgcgagc ggccacgttt tggcgatgag
     2161 gtggcgccca ttgccgccgt cgcaggagaa gaagaatgag cgcccaacgt cgccccttca
     2221 cccgccgccg caagagctgc ccgttctccg gcgccaatgc gccgaagatc gactacaagg
     2281 acgtgcgcct cctgcagcgc ttcgtctcgg agcgcggcaa gatcgtgccc agccgcatct
     2341 cggcggtatc gtccaagaag cagcgcgagc tcgcccaggc gatcaagcgc gcccgcttcc
     2401 tggcgctcct gccctacctc atcgcctagc cgggagacgc tgccatgccg atcaacgtca
     2461 tcctgctcga acgcgtgccc aagctcggcc agatgggcga cgtcgtgaag gtgaagccgg
     2521 gcttcgcccg caactacctg ctgccgcaga agaaggcgct gcgcgccacc aaggacaaca
     2581 tcacctactt cgaatcgcag cgtaagacgc tggaggccca gaacctcgaa cgccgccagg
     2641 aagccgaagc ggttgccggc aagatgagcg acctcaaggt caccctcatc cgccaggcct
     2701 ccgaggcgct gcagctctat ggctcggtga cctcgcgcga catcgccgat gcggccgacg
     2761 cccagggcgt caagctcgag cgcggccagg tcgagctcga caagccgatc aagagcctgg
     2821 gcgcgcacaa gatcaagatc cacctccacc cggaggtcac ggtcgagatc accgccctgg
     2881 tcggtcgctc ccccgacgag gccgagttcc tcgccaaggg cggcaccctg gtcgccgaga
     2941 ccgagcgcgc ccagctcgag gcggcggaag ccgcccggcg cgccgccgag caggccgccg
     3001 ccctgttcga agccaagtcc gtccaagcca acaagcccgc cgagggcgag acggccgagg
     3061 cggctgccgc gaccggggaa gagcccgccg aaaagagcta aaacgccggc cgcaaagggt
     3121 ccggcgtctg ttccaaacgc atgtcatcgc gccgcgatgg catgcgtttt cttttgtatt
     3181 gcagcactcg ctgtgcgatt tcgacccagc cgggcataaa atagttatcg cgcgcgaaac
     3241 ctttgccttg aaattgccat tagtattaac atttcgacca agcaccactc ggagtcatgc
     3301 caagtgcttg ggttcttcct acagcgcatt gccttggggg aatgacgatg ctgctcgccc
     3361 gggtccttgc tccggtattg ggcgaaggcc aactgaccat catcgatgag gccggccggc
     3421 tgcatcgcat cgagggcccc cgggcgggcc cctctgtcac tctgcgtatc cacacctggt
     3481 ggaccggcat gaggctggcg ctacgtcccc ggctggcgct gggcgaggcc tatatggatg
     3541 gcacgctgac cgtcgaggaa ggctccgaca tctacgacct tctcgacctg atcggccgca
     3601 acatcaccgc actcgaagcg acgccgatgg tacgcttgtc ctttaccgtg cagcgctggc
     3661 tgcgggtgct cgagcagtac aatccgatcg gcagggcgca gcgcaacgtc gcgcatcact
     3721 acgatctcaa ggaccagctc tacgatttct tcctcgaccg cgaccgccag tattcctgcg
     3781 cctatttcaa gacgggcgag gagccgctgg aacaggccca gctcgacaag aagcgccaca
     3841 tcgcggccaa gctcctgctg caacccggcc agcgcgtgct cgacatcggc tcgggttggg
     3901 gcggcatggg cctctttctc agccagcagt tcggcgtcga cgtgaccggc gtcaccctgt
     3961 ccaaggagca gcatgccgtg tcgagccgcc gcgcgctcga aggcggcatt gccgacaagg
     4021 tgcgcttcaa gctgctcgac tatcgccggg aacccggcag gtacgaccgc atcgtttcgg
     4081 tcggcatgtt cgagcatgtc ggcgtcgccc attacgtcga gttcttcacc aaggtgaagg
     4141 agctcctgac cgacgacggc gtgatgctgc tgcacgcgat cggccgcatg gagccgcccg
     4201 gcgccaccaa cacctggctc ggcaaataca tcttccccgg cggctacacg ccggcgatgt
     4261 cggaagtgct ggcggcgatc gagaaggtcg ggctgtgggt aaccgacatc gaggttttgc
     4321 gactccatta cgcagagacc ttgcgccact ggcgccaccg ctttctcgcc aatcgcgaaa
     4381 agatcaagca gatggccggc tacgacgatc gcttctgccg gatgtgggag ttctatctcg
     4441 ctggctgcga agtggccttc cgctacatgc atcagatggt cttccagatc cagctcgccc
     4501 gccgccagga cgccgtgccg ctgacgcgcc actacctgat cgacgccgaa aacagcatcg
     4561 ccgcgccgcg ctcgatagcg gcggagtgac ggcctgacag cccgtggctg tcatcccgag
     4621 cttttgcgag ggacctttcc ttggccgtca tcccgaggcc ggaggccgag ggacctttaa
     4681 ggccatgagc aaaggtccct cgctgcgctc gggatgacag tctgttcgta caggacacat
     4741 cgagcactag ggttgtcccc acctttcagg gtattgtgag cgcgccgccg catttgcggt
     4801 ggtgaacgac ccctctcgtc cttaacaagg ctctgccatg gagccccaga aagactcgtc
     4861 caacatcacg cgcctgcccg gcgccgaaga catccgcctg cgcgagccgc cgcacaattt
     4921 cgaggcggag caggcgctgc tgggcgccat cctcgtcaac aacgccgcct accagcgcgt
     4981 cgccgaattc ctgcggcccg agcatttcgc cgacccgttg cacggcaagc tgttcgatac
     5041 gctgtcgcgg ctgatcgagc gcggccaggt ggtgagcgcc atgacgctca agacctatgt
     5101 cgagcaggac gaggacatga aggcggcggg cgatctggat ctggaagacc atttgattca
     5161 tataacggaa ggccacttcg cagccggcga ggtagaaatc ccacatccgg cagaaacgat
     5221 cgtcgtagcc ggccatctgt ttgatgtttt
//
LOCUS       DASWGA010000954         2312 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2252360, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000954 DASWGA010000000
VERSION     DASWGA010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2252360"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..616
                     /locus_tag="VF991_21930"
     CDS             <1..616
                     /locus_tag="VF991_21930"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9559168.1"
                     /translation="GGAQKALGVTPDLCILAKIVAGGLPGGAVAGKREILDQIDHAAS
                     AAKKRDKISHPGTYNANPLSAAAAVAALSLVRDEDLAEKANRTAAELRNALRQVLIEE
                     SVPWGIYGQSSTFLIYPNPTGEAVDPATFDPLKLGFAKLKGARSGPLTGKIRMGLMSH
                     GVDVMGAPGGFVSATHGGAEIEKTVHALRRTVRALKAEREVKAA"
     gene            complement(659..1060)
                     /locus_tag="VF991_21935"
     CDS             complement(659..1060)
                     /locus_tag="VF991_21935"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX9559169.1"
                     /translation="MTIRRVTSPAVPEPPPERWSNCLVSDGIAYVSGMTARGTDPKVL
                     AGLDEYEQAKQIFGKIKGMVEAAGGTMADVVKVTIYVTDIKNNVKVWAARREFFTGDF
                     PASTLVEVSALAAPEILVEIEAIAHIGKGKR"
     gene            complement(1071..2033)
                     /locus_tag="VF991_21940"
     CDS             complement(1071..2033)
                     /locus_tag="VF991_21940"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9559170.1"
                     /translation="MLPRRTFVAAALAAALPAGAQAWPAKPIRLVVPYAPGGTTDVIA
                     RMVAEYLGQRLGQNVIVDNKPGKGAMVGTALVAKAPPDGYTLLMSTISGLSISPTLYG
                     GGDFDPMADFVHVSLASRNPSVLVVNPNFAAKTLKDYVEYARANPGKLAYATAGAGSS
                     NHLLGARLEQVIGAALVHVPYRGAGPAMIDTITGNVPSMFDSLPSAAPHIKAGKVRAL
                     AVSGEQRSPAFPDVPTMKEQGYPDLISYSWFGISVPAKTPASIVDRLASEMQAVLREP
                     AVVKRWEEIGAEASTMTPAEIGRFVQAEIDKWTPVVKASGAKPE"
     gene            2085..>2312
                     /locus_tag="VF991_21945"
     CDS             2085..>2312
                     /locus_tag="VF991_21945"
                     /inference="COORDINATES: protein motif:HMM:NF024773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEX9559171.1"
                     /translation="MITLFQALFEPRRIALIGASADEKKTTSRPQRFLRKHGFSGEIL
                     PVNPSRSEILGERAYKDLDAIAGDIDHAYILL"
BASE COUNT          384 a          745 c          792 g          391 t
ORIGIN      
        1 gggcggcgcc cagaaggcgt tgggtgtcac gcccgacctt tgcatcctgg cgaagatcgt
       61 ggccggcggc ctgccgggcg gcgccgtcgc cggcaagcgc gagattttgg atcagatcga
      121 ccacgccgcc tcggcggcga agaagcggga caagatctcc catcccggca cctacaacgc
      181 caatccgctg tcggccgccg ccgccgtcgc cgcgctgtcg ctggtgcgcg acgaggacct
      241 ggccgagaag gccaaccgca ccgcggccga gctgcgcaac gcgttgcgcc aggtgctgat
      301 cgaggagagc gtgccgtggg gcatctacgg ccagtcctcg accttcctga tctatcccaa
      361 cccgaccggc gaggctgtcg atcccgcgac cttcgatccc ctgaagctgg gcttcgccaa
      421 gctgaagggc gcgcgctccg gtccgctcac cggcaagatc cgcatgggcc tgatgagcca
      481 cggcgtcgac gtcatgggcg cgcccggcgg cttcgtgtcg gcgacgcatg gcggggccga
      541 gatcgaaaag accgtgcacg cgttgcgccg gaccgtgcgg gcgctcaagg ctgagcgcga
      601 ggtgaaagcg gcgtgagcat cttctcctct cccgtcatac agggaggaga agaggactct
      661 agcgcttacc cttgccgata tgcgcgatgg cctcgatctc gaccaggatc tcgggcgcgg
      721 cgagcgcgct cacctcgaca agggtggaag ccgggaagtc gccggtgaag aactcgcggc
      781 gcgccgccca taccttgacg ttgttcttga tgtcggtgac gtagatcgtg accttgacca
      841 cgtcggccat ggtcccgccc gccgcctcga ccatgccctt gatcttgccg aagatctgct
      901 tggcctgttc gtactcgtcc aggccggcga gcaccttcgg atcggtgccg cgggccgtca
      961 tgccggacac gtaggcgatc ccgtcggaga ccaggcagtt cgaccagcgc tcaggcggcg
     1021 gctcgggcac ggcgggcgat gtcacgcggc ggatggtcat ggtcgtctcc tcattcgggt
     1081 ttggcgccgg aagctttcac gacgggcgtc catttgtcga tctcggcctg gacgaagcgg
     1141 ccgatctcgg cgggggtcat ggtgcttgcc tcggcgccga tctcttccca gcgcttgacg
     1201 acggcgggct ccctcagcac ggcctgcatc tcgctcgcca gacggtcgac aatggacgcc
     1261 ggagtcttgg cgggcaccga gatgccgaac caggagtagg agatcaggtc gggatagccc
     1321 tgctccttca tcgtgggaac gtcgggaaaa gccgggctgc gctgctcgcc gctgacggcc
     1381 agggcgcgga ctttgccggc cttgatgtgg ggtgccgccg atggcagcga atcgaacatc
     1441 gacggcacgt tgcccgtgat ggtgtcgatc atcgccggtc cggcgccgcg atagggcacg
     1501 tggacgaggg ccgcaccgat cacttgttcg agccgcgcgc ccagcaagtg attgctcgag
     1561 cccgcacctg cggtggcgta ggcgagcttg ccggggttgg ccctggcata ctcgacatag
     1621 tccttgagcg tcttggccgc gaaattggga ttcaccacca gcacgctggg attgcgcgag
     1681 gcgagtgaga catggacgaa gtccgccatg gggtcgaagt cgccgccgcc atagagcgtg
     1741 ggcgagatcg acaggccgga gatcgtcgac atcagcagcg tgtagccgtc gggcggcgcc
     1801 ttggcgacca gggcggtgcc caccatcgcc cctttgcccg gcttgttgtc gacgatgacg
     1861 ttctggccga gccgctggcc gagatattcg gcgaccatgc gggcgatgac atccgtcgtg
     1921 ccgcccggcg cataaggcac gacgagccgg atgggcttgg caggccaggc ctgtgcgcct
     1981 gccggcaaag cggcggcaag cgctgcggca acgaaagtgc ggcgagggag catgcgccga
     2041 aatatagcgc ctgttgtcat gacagctatg gtgtactcga aaccatgatt acgctctttc
     2101 aagccctgtt tgaacccagg cgcatcgccc tgatcggcgc ctcggccgat gagaagaaaa
     2161 cgacctcgcg gccgcagcgc ttcctgcgca agcacggttt ttccggcgag atcctgccgg
     2221 tgaatccgtc gcgcagcgaa atcctgggcg agagggctta caaggatctc gacgccatcg
     2281 cgggcgacat cgatcacgcc tacatcctgt tg
//
LOCUS       DASWGA010000955         4980 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_999240, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000955 DASWGA010000000
VERSION     DASWGA010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4980
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_999240"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VF991_21950"
     CDS             complement(<1..833)
                     /locus_tag="VF991_21950"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9559172.1"
                     /translation="MLSESNASLRTRLRRNRLWVAAGGVAVAAAVLVGLWANIGPGNA
                     VAPPEKPSRDADGAFRPSDTQWASLRLATVRQVAFRDERATDGKIAINEDTTTPVFSP
                     YSGRVSKLIARPGDFVERGQPLFAIEASEFVQGHNDLVTAVAGVEKAQSRLVLAQAVE
                     KRQRELLAIRGGAMKDLEQAQSDLVAAQGDLRAAQITRAAVRNRLSILGRSDEEIARL
                     EKLDRIGAETIVAAPIGGTIIQRKVGLGQYINAGANDPVITVGNLSTVWLIANVRESD
                     AP"
     gene            976..1656
                     /locus_tag="VF991_21955"
     CDS             976..1656
                     /locus_tag="VF991_21955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9559173.1"
                     /translation="MRVLLVEDNTELVSLLKKGLTHGGFDADSVGNAADAAHVMATMR
                     YAAIVLDLGLPDEDGISLLRDMRRRGDSTPVLVLTARDGVSDRVTGLREGADDYMAKP
                     FAMEELVARLQALLRRPGNLLGKRLTFGNVALDTEGRQVIVDGAVRAFPARETAVLEI
                     LLRRSGNVAPKRLFEDHLFGLSGDVGSNAVEVYVHRLRKMLADAGATVKIHTVRGVGY
                     LMAEEKGG"
     gene            1653..3026
                     /locus_tag="VF991_21960"
     CDS             1653..3026
                     /locus_tag="VF991_21960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9559174.1"
                     /translation="MKRFRSIISRVVALHVVAIGITSILMPLALYWLLNQAANSLHRD
                     ALRGQAATIAGFLRPQPDGGVVLDIPTDIQPLYSGGYGLYAYAVLDSSGRVLFSSRSD
                     GSALFTLEESSSGDWIIRRRSTGSVLFGVSVARPVGQRLYWIQVGQDLSHRDVIIDDV
                     VSSFFPRVAWITFPILLLLLLIDILIFRRALEPVREASTTAAAIGPARTDVRLPEQVM
                     PTEIVPLVHAVNQAFDRLEAGFRAQRDFTADMAHELRTPLAIMRARIDALEPGPVRDA
                     LRTDIVNMTRTVSQVLDIAELESFVIGGQARADLHAVCAEAVAFMAPLAVDASKTIAL
                     TGAEGPVWVRGHSEALFRAVRNLIENALKHTPHGGSIEVDVSADGVVRVTDDGPGVPE
                     AERESIFRRFWRRDRTQAESRGLGLAIVARVAETHHGTVTVENRPAGGAVFTLSLRPV
                     AGLTAAN"
     gene            3112..>4980
                     /locus_tag="VF991_21965"
     CDS             3112..>4980
                     /locus_tag="VF991_21965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9559175.1"
                     /translation="MTTGATGSATDARDTFPKLLAERARTSPRRPAYREKEHGIWQTY
                     DWADVAAEVGRLAAGLADLGFKRGDRLIVIGDNRPRLYWSMCAAQSLGGIPVPVYQDS
                     VAAELAYVVEHAGARFALAENQEQVDKLLEVRRKVPSLATVIYDDPRGLRHYDGLLSF
                     AEVQGLGDKALAATPDVVSAEVAKGRGSDDAIMLYTSGTTGRPKGAVLSYDNLVWAAR
                     AGAEFDGLKEGDELLSYLPMAWVGDHIFSYAQGYVVGLVVNCPESAATVMTDLREIGP
                     TYYFAPPRVLENLITQVTIRMEDAGLLKRRLFQAFMALARRVGPALLDKRPVAALDRL
                     LYALGGVLVYGPLKNTLGMSRVRVAYTAGEAVGPEIFNFYRALGVNMKQLYGQTEASV
                     FVTIHPNGEVFSDTVGKPVSNVELRIAESGEVLYRSPGVFKEYFKNPEATNDTKTADG
                     WVHTGDAGYLDERGHLRIIDRAKDVGKLNDGTLFAPKFIENKLKFFPHINEAVAFGHG
                     RDYVAVFVNIDMAAVGDWAERRNIAYASYQELARAKAVYDLVQSEIERVNRDLAADPR
                     MAGAQIRRFLILHKALEADDGELTRTNKVRRGFIGERYKTLVDALYSGAKDVHIKVD"
BASE COUNT          780 a         1724 c         1682 g          794 t
ORIGIN      
        1 ggcgcgtccg attcacgcac attggcgatc agccaaactg tcgagagatt gccgacggtg
       61 atcaccggat cgttggcgcc ggcgttaata tattggccca ggcccacctt gcgttggatg
      121 atggtgccgc cgatcggcgc agcaacgatg gtctcggcgc cgatacggtc gagcttctcg
      181 agccgggcga tctcctcgtc gcttcggccg aggatgctca gccggttgcg taccgccgcg
      241 cgggtgatct gcgcggcgcg caggtcgcct tgtgcggcca ccagatcgga ctgagcctgc
      301 tcgagatcct tcatcgcgcc gccacggatc gccagcagct cgcgctggcg cttctcgacg
      361 gcctgcgcca gcaccagccg cgattgcgcc ttctcgacgc ccgcgacggc ggtgacgaga
      421 tcgttgtggc cctgcacgaa ttcgctggct tcgatggcga acagcggctg gccgcgctcg
      481 acgaagtcgc cgggccgggc gatcagcttg ctgacccggc cggaataggg cgagaacacc
      541 ggcgtcgtgg tgtcctcgtt gatggcgatc ttgccgtcgg tcgcgcgctc gtcgcgaaag
      601 gcgacctggc gaaccgtcgc cagccgcaga ctcgcccact gcgtgtcgga gggccggaag
      661 gcgccgtcgg cgtcgcgcga cggcttctcc ggcggcgcca ccgcattgcc cggaccgatg
      721 ttggcccaca ggcccaccag cacggccgcc gcgaccgcga cgccgcccgc cgcgacccac
      781 aggcggtttc gcctgaggcg cgtcctcaac gaggcgttgg actccgagag catgagcttg
      841 gcggtcctgt cggatgttcc gggagacgag ccaaacctag tcctttccga ttacgtcaac
      901 ctgacggggc catgccgcaa ttgccgtgct aggatcgccc cgaagccagc ctgcgaatcg
      961 gaggcgcgca cgtcgatgag ggtgcttctc gtcgaagaca acaccgaact cgtttccctg
     1021 ctgaaaaaag gcctcaccca cggcggtttt gacgccgatt cggtgggcaa cgcggccgac
     1081 gccgcgcacg ttatggcaac gatgcgctac gccgcgatcg tgctcgatct cggcttgccc
     1141 gacgaagacg gaatttccct gctgcgcgac atgcgacggc gcggcgattc gacgccggtg
     1201 ctcgtgctca cggcgcgcga cggcgtcagc gaccgcgtca ccgggctgcg cgagggcgcc
     1261 gacgattaca tggccaagcc gttcgccatg gaagagctgg tcgcgcgcct gcaggcgctg
     1321 ctgcgccggc ccggcaacct gctcggcaag cggctgacct tcggcaacgt ggcgctcgac
     1381 accgagggac ggcaggtgat cgtcgacggg gcggtgcgcg ccttcccggc gcgcgagacc
     1441 gcggtgctgg aaatcctgct caggcgcagc ggcaacgtgg cgcccaagcg cttgttcgag
     1501 gaccacctgt tcggcctgtc gggcgacgtc ggctcgaacg ccgtcgaagt ctatgtccat
     1561 cgcctgcgca agatgctggc cgacgcaggc gccacggtga agatccatac ggtgcgcggc
     1621 gtcggctacc tgatggccga ggaaaagggc gggtgaagcg cttccgctcg atcatctcgc
     1681 gggtcgtggc gctgcatgtc gtggcgatcg gcatcacctc catattgatg ccgctcgctc
     1741 tctactggct gctcaaccag gccgccaaca gcctgcaccg cgacgccctg cgcggccagg
     1801 ccgcgaccat tgcgggcttc ctgcgcccgc agcccgacgg cggcgtcgtg ctcgacattc
     1861 cgaccgacat ccagccgctc tattccggcg gctacgggct ctacgcctat gcggtgctcg
     1921 actcgtcggg ccgcgtcctg ttttcctcgc gcagcgacgg cagcgcgctg ttcacgctcg
     1981 aagagtcgag cagcggcgac tggatcatcc gccggcgcag cacgggctcc gtgctgttcg
     2041 gcgtcagcgt ggcgcgcccg gtcggccagc gcctgtactg gatccaggtc ggacaggacc
     2101 tgtcgcaccg cgacgtcatc atcgacgacg tcgtcagttc gttctttccg cgtgtggcgt
     2161 ggatcacctt cccgatcctg ctgctgctgc ttctgatcga catcctgatc tttcgtcgcg
     2221 cgctcgaacc ggtgcgcgag gcctcgacca cggcggcggc gatcgggccg gcgcggaccg
     2281 acgtgcgcct gcccgagcag gtgatgccga ccgagatcgt gccgctggtc cacgccgtca
     2341 accaggcgtt cgaccgcctc gaggcgggct ttcgcgccca gcgcgacttc accgccgaca
     2401 tggcgcacga gctgcgcacg ccgcttgcca tcatgcgcgc gcgcatcgac gccctcgagc
     2461 ccgggccggt gcgcgacgcg ctgcgcaccg acatcgtcaa catgacgcgc accgtgagcc
     2521 aggtgctcga catcgcggag ctcgagagct tcgtcatcgg cggccaggcc agggccgacc
     2581 tgcacgccgt ctgcgccgag gcggtggcct tcatggcgcc gcttgccgtc gacgcatcca
     2641 agaccatcgc gctcaccggc gcggaaggcc cggtctgggt gcgcggccat tccgaggcgc
     2701 tgttccgcgc cgtgcgcaac ctcatcgaga acgcgctcaa gcacacgccg cacggcggct
     2761 cgatcgaggt cgatgtctcg gccgacggcg tcgtgcgggt caccgacgac ggccccggcg
     2821 tgcccgaggc ggagcgcgaa tcgatcttcc gccgcttctg gcggcgcgat cgcacgcagg
     2881 ccgaaagccg tgggctcggc ctggcgatcg tggcccgcgt cgccgagacc caccacggca
     2941 ccgtcacggt cgagaaccgg ccggccggcg gcgccgtctt cacgctgagc ctgcggccgg
     3001 tcgctggctt gaccgctgca aattgactat ggctatctgc ggctatctgc ctgccgaaat
     3061 cgctgcacag aaccaacaag cggacggcgg accgagggag cacggagtgg gatgacgacg
     3121 ggggcgacag gcagcgcgac cgacgctcgg gatacgtttc ccaagcttct ggcggagcgc
     3181 gcccgcacca gcccgcgccg cccggcctat cgcgagaagg aacacggcat ctggcagacc
     3241 tacgactggg ccgatgtcgc ggccgaggtc gggcggctgg cggccggcct ggccgacctc
     3301 ggattcaagc gcggcgaccg gctgatcgtg atcggcgaca accgtccgcg gctctactgg
     3361 tcgatgtgcg cggcgcagtc cctgggcggg ataccggtgc cggtctacca ggactcggta
     3421 gccgccgagc ttgcctatgt cgtcgagcat gccggcgcgc gcttcgcgct cgccgagaat
     3481 caggagcagg tcgacaagct cctggaggtc cgccgcaagg tgccgtcgct cgctaccgtc
     3541 atctacgacg acccgcgcgg gctcaggcac tacgatggcc tgttgtcctt cgccgaggtc
     3601 caggggctgg gcgacaaggc gctggcggcg acgccggacg tagtgtcggc cgaggtcgcc
     3661 aagggccgcg gctcggacga cgccatcatg ctttatacgt cgggcacgac gggccggccc
     3721 aagggcgcgg tgttgagcta cgacaacctg gtatgggcgg cgcgcgccgg cgccgaattc
     3781 gatggcctca aggaagggga cgagcttctc tcctacctgc cgatggcctg ggtcggcgat
     3841 cacatcttct cctacgctca ggggtacgtt gtcggcctgg tggtgaactg tcccgaatcg
     3901 gccgccacgg tgatgaccga tctgcgcgaa atcggcccga cctattactt tgcgccgccg
     3961 cgcgtgctcg agaacctgat cacgcaggtc accatccgca tggaggacgc gggcctcctg
     4021 aagcgccgcc tgttccaggc cttcatggcg ctcgcccgcc gggtcgggcc ggcgctcctc
     4081 gacaagcggc ccgtcgccgc gctcgaccgc ctgctctatg cgctgggcgg cgtgctggtc
     4141 tacgggccgc tcaagaacac gctgggcatg agccgggtgc gcgtcgccta caccgcgggc
     4201 gaggcggtcg gacccgagat cttcaacttc taccgcgcgc tcggcgtcaa catgaagcag
     4261 ctctacggcc agaccgaggc ctcggtgttc gtcaccatcc atcccaacgg cgaggtcttc
     4321 tccgacacgg tcggcaagcc ggtctccaac gtcgagctca ggatcgccga gtcgggcgag
     4381 gtgctctatc gcagccccgg cgtgttcaag gagtatttca agaaccccga ggcgaccaac
     4441 gacaccaaga cggcggacgg ctgggtgcat accggcgatg ccggctacct cgacgagcgc
     4501 ggccacttgc gcatcatcga ccgcgccaag gatgtcggga agctgaacga cggcacgctg
     4561 ttcgcgccga aattcatcga gaacaagctg aagttcttcc cgcacatcaa cgaggcggtg
     4621 gcgttcggcc acggccgcga ctatgtcgcg gtcttcgtca atatcgacat ggcggcggtc
     4681 ggcgactggg ccgagcggcg caatatcgcc tatgcgagct accaggagct ggcgcgcgcc
     4741 aaggcggtct acgacctggt gcaaagcgag atcgagcggg tcaaccgcga cctcgccgcc
     4801 gatccgcgca tggcgggcgc ccagatccgc cgattcctga tcctgcacaa ggcgctcgag
     4861 gccgacgacg gcgagctgac gcgcaccaac aaggtgcgcc gcgggttcat cggtgagcgc
     4921 tataagaccc tggtcgatgc gctctacagc ggcgccaagg acgtccatat caaggtcgac
//
LOCUS       DASWGA010000956         2655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_751329, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000956 DASWGA010000000
VERSION     DASWGA010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_751329"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..509
                     /locus_tag="VF991_21970"
     CDS             57..509
                     /locus_tag="VF991_21970"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018207851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(deoxy)nucleoside triphosphate
                     pyrophosphohydrolase"
                     /protein_id="HEX9559176.1"
                     /translation="MSPTFDEECPGGPPPLGDRPLVLVAAVALVDRDGRVLIAQRPAG
                     KPMAGLWEFPGGKVDPGETPEEALVRELHEELGIETATSCLAPIAFASHGYDKFHLLM
                     PVFACRKWNGLPRPREGQALRWVPPVELSRYPMPPADLPLVGLLRDLL"
     gene            complement(504..1316)
                     /locus_tag="VF991_21975"
     CDS             complement(504..1316)
                     /locus_tag="VF991_21975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559177.1"
                     /translation="MKLSFSDVLSEGFSFFFGRLRLFFHLVTIPWIVSVAIRLVGAAL
                     APDSLIAVLVEKALDVVPTVMFMVAWQRVVLLGPSRVGRLPGLGWSPREWAYLVHLIK
                     VAGVTFVLIGALVLTVGSLDPAALTPGAPLDPEATRQQAMAPPLAAGFIVSMLLALRV
                     SYGLAATAVDVPFSPRLSWAHSRGNAWTVIAALFLTGFAGALVTAMATLVMLGLMSGV
                     LGAREAAAVVTWTVGILVSYAAAGIVATVQAVIFRRLLGWREGSTLPALAGS"
     gene            complement(1329..2243)
                     /locus_tag="VF991_21980"
     CDS             complement(1329..2243)
                     /locus_tag="VF991_21980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX9559178.1"
                     /translation="MTSADPLLVFDRVLLRRRRERAARDWDRRAFLKREIAERLVERL
                     DDVRRSFPLALDIGSHGDEIASALGPRKTVECLVRLDLGHGFARRARGPAVVADEEFL
                     PFAPQSFDLVMSAMDLHWVNDLPGTLIQIGRILKPDGLLLGAMLGGSTLWQLREALAA
                     AESEVEGGLSPRVSPFADLRDAAGLLQRAGFALPVADGETIDVEYDNALALMRDLGAM
                     GESNLIVERRRGLARRATLLRAAEIYGERFALPSGRVAASFEVLFLHGWRPDASQPKP
                     IKPGSAAARLADALGSTEESAGEKVGRG"
     gene            2371..>2655
                     /locus_tag="VF991_21985"
     CDS             2371..>2655
                     /locus_tag="VF991_21985"
                     /inference="COORDINATES: protein motif:HMM:NF039185.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="double zinc ribbon domain-containing protein"
                     /protein_id="HEX9559179.1"
                     /translation="MLLDSVLPPLCLGCNEIVETPGTLCAACWQGFSFIAPPYCARCS
                     APFAEDLGEDALCGACLARPPRYRRARAALVYDTRSRRLVLPFKHGDRTDI"
BASE COUNT          428 a          931 c          925 g          371 t
ORIGIN      
        1 gtctggacct gcgatctgac gcacggctac atcgacatca acggcagcta ccgtacttga
       61 gcccgacctt cgacgaagag tgtccgggcg gcccgccgcc gctcggcgat cgtcccttgg
      121 tgctggtcgc ggcggtggcg ctggtcgaca gggatggccg cgtgctgatc gcccagcggc
      181 cggcgggaaa gccgatggcc gggctgtggg agtttcccgg cggcaaggtc gatcccggcg
      241 agactcccga agaggcgctg gtgcgcgaac tgcatgagga gctcggcatc gagacggcga
      301 cgagttgcct ggcgccgatc gctttcgcca gccacggcta cgacaagttc catctgctga
      361 tgccggtctt cgcctgtcgc aagtggaacg gcctgccgcg gccgcgcgaa ggccaggcgc
      421 tgaggtgggt cccgccggtc gagctctcgc gctatcccat gccgccggcc gacctgccgc
      481 tggtcgggct gctgcgcgac cttctatgat ccggcaagag cgggcagggt gctgccttcg
      541 cgccagccga gcagccggcg gaagatgacg gcctggaccg tcgccacgat gccggcggcg
      601 gcgtaggaga ccaggatccc taccgtccag gtgacgaccg ccgcggcctc ccgcgcgccc
      661 agcaccccgc tcatcaggcc gagcatgacc agcgtcgcca tggccgtaac cagtgcgccg
      721 gcgaagccgg tgaggaaaag cgcggcgatg acggtccagg cgttgccgcg gctgtgggcc
      781 cacgacaggc gcggcgagaa cggcacatcg acggcggtgg cggccaggcc gtagctgacg
      841 cgcagcgcca gcagcatcga cacgatgaag ccggccgcca gcggcggcgc catcgcctgc
      901 tggcgtgtcg cttccggatc gagcggggcg cccggcgtga gcgccgcggg atcgagcgag
      961 cccacggtga ggacgagggc cccgatcagg acgaaggtga cgccggcgac cttgatcaga
     1021 tgcacgagat aggcccactc gcgcggcgac cagcccagtc cgggcaggcg gccgacgcgg
     1081 ctcggcccca acagaacaac cctctgccag gcgaccatga acatcacggt cggcacgaca
     1141 tcgagcgcct tctcgaccag caccgcgatc agggaatccg gcgcgagcgc ggcgccgacc
     1201 aggcggatgg cgaccgagac gatccacgga atggtgacga ggtggaagaa caggcggagc
     1261 ctgccgaaga agaagctgaa tccctccgac agcacgtcgc tgaacgacaa tttcacggcc
     1321 ggcacgatct agccccgccc caccttctcg ccggcgctct cctcggtgct gcccagcgcg
     1381 tcggccaggc gggccgcggc actgcccggc ttgatgggct tgggctgcga ggcatcgggc
     1441 cgccagccgt gcaggaacag cacctcgaag cttgcggcga cccggccgga cggcagcgcg
     1501 aagcgctcgc cgtagatctc ggccgcgcgc aacagtgtgg cgcgccgcgc cagcccgcga
     1561 cggcgttcga cgatcaggtt gctttcgccc atggcgccga ggtcgcgcat caaggcgagc
     1621 gcattgtcgt attcgacgtc gatcgtttcg ccgtcggcca ccggcagggc aaagccggcg
     1681 cgctgcagca gacccgcggc gtcgcgcaga tccgcaaacg gcgagacgcg cgggctgagg
     1741 ccgccttcga cctcgctttc cgcagcggcc agggcctcgc gcaattgcca caacgtggag
     1801 ccgcccagca tggcgccgag cagcagtccg tccggcttca ggatgcggcc gatctggatc
     1861 agcgtacccg gcaggtcgtt gacccaatgc aggtccatcg cgctcatcac cagatcgaag
     1921 ctttgcggcg cgaaaggcag gaactcttcg tcggctacca ccgccggccc gcgcgcgcgg
     1981 cgggcaaagc catggccgag gtccaaccgc accaggcact ccacggtctt gcgtggcccg
     2041 agcgccgagg cgatttcatc gccatgcgag ccgatgtcga gggcgagggg aaagctgcgg
     2101 cgcacgtcgt ccagacgctc gaccaggcgc tcggcgatct cgcgtttgag gaaggctcgg
     2161 cgatcccaat cgcgcgctgc ccgctcacgc ctgcggcgaa gcaggacgcg gtcgaagacc
     2221 aggagagggt cggcggacgt cacgcccgtg tatgtagggc caaagtcctg cgcccggtag
     2281 gggagccgcc atcctgtcgg cgcatttcga cggtctgatg ccggcatgtt gcccgctgga
     2341 ttgagccacg cctgtgccca agcgggccgc ttgttgctcg attcagtgct gccgccgctt
     2401 tgcctcggat gcaacgagat cgtcgagacg ccgggcacat tgtgcgcggc ctgctggcaa
     2461 ggcttttcct tcatcgcgcc gccctactgc gcacgctgct ccgctccgtt cgccgaggat
     2521 ctgggcgaag acgcgctgtg cggcgcctgc ctcgcccgcc cgccgcgcta tcggcgcgcc
     2581 cgcgccgcgc tggtctacga cacgcgcagc cgtcgcctgg tcctgccgtt caagcacggc
     2641 gatcgcaccg acatt
//
LOCUS       DASWGA010000957         1953 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2135798, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000957 DASWGA010000000
VERSION     DASWGA010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1953
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2135798"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..442)
                     /gene="fusA"
                     /locus_tag="VF991_21990"
     CDS             complement(<1..442)
                     /gene="fusA"
                     /locus_tag="VF991_21990"
                     /inference="COORDINATES: protein motif:HMM:NF015706.4"
                     /note="EF-G; promotes GTP-dependent translocation of the
                     ribosome during translation; many organisms have multiple
                     copies of this gene; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX9559180.1"
                     /translation="MLIELAIEPWSRADQEKLSAALQSLVRQEASFGATTDPETGQTV
                     VKGETEDQLERIIKRLTSEFGIAITAGSPQVAYRETPGCKAEIDYTHKRQSGGWGQFA
                     RVKLVFEPGAPGSGYSFESKIVGGTVPKEFIPGVEKGLAASRESG"
     gene            complement(459..1931)
                     /gene="gatA"
                     /locus_tag="VF991_21995"
     CDS             complement(459..1931)
                     /gene="gatA"
                     /locus_tag="VF991_21995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEX9559181.1"
                     /translation="MAALTDLTIAELTAVLAQKKASAIEVADAHLKKLDEHRALNAFI
                     TETPDKAREMAKASDARRAKGQAGLLDGVPLAIKDLFCTEGVQTTAGSHILEGFVPPY
                     ESTVTANLWKAGAVMVGKTNLDEFAMGSSNMTSHFGGVENPWKRKGDNRKLVPGGSSG
                     GSAAAVAAYMVPGSTGTDTGGSIRQPASFCGIVGLKPTYGRCSRWGVVAFASSLDQPG
                     PLARTVEDSALLLQGMAGHDPKDSTSAPLAVPDFAAAARNPDIKGLRIGIPKEYRVDG
                     TSPEIVALWEEGIEMMKAAGAMPVEISLPHTKYALPAYYIVAPAECSSNLARYDGVRF
                     GLRVPGKDLIDMYQNTRGAGFGKETRRRILIGTYVLSAGYYDAYYKKAQQIRALIARD
                     FKQAFEKCDVLLTPTAPTAAFAAGEKMDDPVTMYLNDMFTIPASMAGLPGISVPAGLD
                     KDGLPLGLQIIGRAFDEETMLRAAAALEKAAAFNQRPPGY"
BASE COUNT          290 a          676 c          636 g          351 t
ORIGIN      
        1 cgcctgactc gcgcgaagcc gccaggccct tctcgacgcc gggaatgaac tccttcggca
       61 ccgtaccgcc cacgatcttg ctctcgaagc tgtagcccga gcccggcgca cccggctcga
      121 acaccagctt cacgcgcgcg aactggcccc agccgccgct ctgtctcttg tgggtgtaat
      181 caatttccgc cttgcaccct ggcgtctcac gataggcaac ctgcggcgag ccggcagtga
      241 tcgcaatgcc gaactcgctc gtcaggcgct taatgatccg ttcgagttga tcctctgtct
      301 cacctttgac gacggtctgc ccagtctcag gatcggtagt cgcgccgaac gatgcctctt
      361 gccggaccag actttgcagt gcggcgctga gcttctcctg gtccgctctc gaccagggct
      421 cgatggcgag ttcgatcagc atcggcacgg ccgcctgttc agtagcccgg cggccgctgg
      481 ttgaacgccg ccgccttctc cagcgccgcc gccgcgcgca gcatcgtctc ctcgtcgaag
      541 gcgcggccga tgatctgcag tccgagtggc aggccgtcct tgtcgaggcc ggccggcacg
      601 gaaatgccgg gcaggcccgc catcgaggcc ggaatggtga acatgtcgtt gagatacatg
      661 gtcaccggat cgtccatctt ctcgccggcg gcgaacgccg ccgtgggcgc ggtcggtgtc
      721 agcagcacgt cgcatttctc gaaggcctgc ttgaagtcgc gggcgatcag tgcgcggatc
      781 tgttgggcct tcttgtaata ggcgtcgtag tagccggccg acagcacata ggtgccgatc
      841 aggatgcgcc ggcgggtttc cttgccgaag cccgcgccgc gcgtgttctg gtacatatcg
      901 atcaggtcct tgccggggac ccgaagcccg aaacgcaccc cgtcgtaacg cgccaggttc
      961 gacgaacact ccgccggggc cacgatatag taagccggca acgcgtactt ggtgtgcggc
     1021 agcgagatct cgaccggcat cgcgcccgcg gccttcatca tctcgatgcc ctcttcccac
     1081 agcgccacga tctcgggcga cgtgccgtcg actcgatact ccttcggaat gccgatccgt
     1141 agccccttga tgtcggggtt gcgcgccgcc gcggcgaagt ccggcacggc aagcggcgcg
     1201 gaggtagaat ccttgggatc gtggccggcc atgccctgca gcaggagcgc gctatcctcg
     1261 acggtgcggg cgagcggacc cggctggtcg agcgagctgg cgaaggccac gacgccccag
     1321 cgcgagcagc ggccgtaggt cggcttcagc ccgacgatgc cgcagaacga cgccggctgg
     1381 cggatcgagc cgccggtgtc ggtgccggtg ctgcccggca ccatgtaggc cgcaaccgcg
     1441 gcggccgaac cgcccgacga gccgcccggc accagcttgc ggttgtcgcc cttccgcttc
     1501 cacggattct cgacgccgcc gaaatggctg gtcatgttgg acgagcccat ggcgaactcg
     1561 tcgaggttgg tcttgccgac catgaccgcg cccgccttcc atagattggc ggtcaccgtg
     1621 ctctcgtagg gcggcacgaa gccttcgagg atgtgggagc cggccgtggt ctgcacgccc
     1681 tcggtgcaga acaggtcctt gatggccagc ggcacgccgt cgagcaggcc cgcctggccc
     1741 ttcgcgcgcc gcgcgtcgga ggccttggcc atctcgcgcg ccttgtcggg cgtctcggtg
     1801 atgaaggcgt tgagcgcgcg gtgctcgtcg agcttcttca gatgcgcgtc cgccacctcg
     1861 atggcgctcg cctttttctg cgccagcacc gccgtgagct cggcaatggt gaggtcggtg
     1921 agggccgcca tcgcctactc caccaccttg ggc
//
LOCUS       DASWGA010000958         1838 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1368945, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000958 DASWGA010000000
VERSION     DASWGA010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1368945"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1585
                     /locus_tag="VF991_22000"
     CDS             <1..1585
                     /locus_tag="VF991_22000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008142893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559182.1"
                     /translation="KATAAAGAAATAAPAIWSDAKAQARNETLLIVGESPPNSMDIHG
                     VGANRPAYEVSWNTHDRLMTYGAKKDDKGNDHYDYTKLEPELATDWNVTPTSATFKLR
                     KDAKFHDGTPITARDVKWSFDRAVTVGGFPTFQMAAGSLTKPEQFVVVDDNTFRVDFL
                     RADKLTMPDIGVPVPVIMNSELCKKNATAADPWAMEWCKNNHASGGAYKVDRWQPGQE
                     VVYLRNDDWKNGPLPKVKRVIMRIIPSAGNRRALLERGDADLSFDLPSKDFAELKSSP
                     KLTVIGTPIENAMMYIGMNVNQKPFDNVKVRQAVAWAVPYQQIMDSVLFGQAIPLYGG
                     ADNKFKGVSWPQKDGYKTDIAKAKALMAEAGYPAGFETTLSFDLGLASTNEPLTVLVQ
                     ESLAQIGIKTTINKVPGANWRGELLKKNMPMITNAFGGWLNYPEYFFFWCYHGQNAVF
                     NTMGYKNPTMDALIDKARFTTGPEYEAAVKGFIDIAFEEVPRVPIFQPLLNVAMQKNV
                     TGYRYWFHRQLDYRQLAKG"
     gene            1585..>1838
                     /locus_tag="VF991_22005"
     CDS             1585..>1838
                     /locus_tag="VF991_22005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9559183.1"
                     /translation="MLKLLLSRLATAIPSIVGVVVVTFMLTRLLPGDPAAYFAGLAAS
                     PQAIAEIRSKLGLDKSLPEQFVGYIADLAHGNLGNSLSTG"
BASE COUNT          366 a          600 c          579 g          293 t
ORIGIN      
        1 caaggccacc gcggctgccg gcgcagccgc cacggccgca cccgccatct ggtcggacgc
       61 caaggcgcag gcgcgcaacg agacgctgct gatcgtgggc gagagcccgc ccaactcgat
      121 ggacatccac ggcgtcggcg ccaaccggcc ggcctacgaa gtgtcgtgga acacccacga
      181 ccggctgatg acctatggcg ccaagaagga cgacaaaggc aacgaccatt acgactacac
      241 caagctcgag cccgagcttg cgaccgactg gaacgtcacg ccgacctcgg ccaccttcaa
      301 gttgcgcaag gatgccaagt tccacgacgg cacgccgatc accgcccggg acgtgaagtg
      361 gtcgttcgac cgcgccgtca cggtgggggg cttcccgacc ttccagatgg cggcgggctc
      421 gttgacgaag cccgagcagt tcgtggtggt cgacgacaac accttccgcg tcgacttcct
      481 gcgcgccgac aagctcacca tgcccgacat cggcgtgccg gtgccggtga tcatgaactc
      541 ggagctttgc aagaagaacg cgacggcggc cgatccatgg gcgatggaat ggtgcaagaa
      601 caaccacgct tcgggcggcg cctacaaggt cgaccgctgg cagcccggcc aggaggtcgt
      661 ctacctccgc aacgacgact ggaagaacgg cccgctgccc aaggtcaagc gcgtcatcat
      721 gcgcatcatc ccgtcggcgg ggaaccggcg ggcgctgctc gagcgcggcg atgccgatct
      781 ttccttcgat ttgccgtcaa aggatttcgc cgagctgaaa tcgtcgccca agctcaccgt
      841 gatcggcacg ccgatcgaga acgcgatgat gtatatcggc atgaacgtca accagaagcc
      901 gttcgacaac gtcaaggtgc gccaggccgt ggcctgggcg gtgccctacc agcagatcat
      961 ggactcggtg ctgttcggcc aggcgatccc gctctacggc ggcgccgaca acaagttcaa
     1021 gggcgtctcc tggccgcaga aggacggcta caagacggac atcgccaagg ccaaggcgct
     1081 gatggccgag gcaggctatc ccgccggctt tgagaccacg ttgtcgtttg acttgggcct
     1141 cgccagcacc aatgagccgc tcaccgtgct ggtgcaggag agcctggcgc agatcggcat
     1201 caagaccacg atcaacaagg tgccgggcgc caactggcgc ggcgagctgt tgaagaagaa
     1261 catgccgatg atcaccaacg ccttcggcgg atggctgaat tatccggagt acttcttttt
     1321 ctggtgctat cacggccaga acgccgtgtt caacaccatg ggctacaaga acccgacgat
     1381 ggatgccttg atcgacaagg cgcgcttcac gaccgggccc gagtacgagg cggcggtcaa
     1441 gggtttcatc gacatcgcct tcgaggaggt gccgcgggtg ccgatcttcc agccgctctt
     1501 gaacgtggcg atgcagaaga acgtcaccgg ctaccgttac tggttccacc gccagctcga
     1561 ctatcgccag ctcgcgaagg ggtgatgctg aaactgctgc tgtcgcggct ggcgacggcg
     1621 atcccgagca tcgtcggggt cgtcgtcgtg accttcatgc tgacccggct gctgccgggc
     1681 gacccggcag cctatttcgc agggttagcg gcgagcccgc aggcgatcgc agagatccgt
     1741 agcaagcttg gcctcgacaa gtcgctgccc gagcagttcg tgggctacat cgccgacctg
     1801 gcgcacggca atctcggcaa ttccctcagc accggcca
//
LOCUS       DASWGA010000959         2864 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_112629, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000959 DASWGA010000000
VERSION     DASWGA010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112629"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1077
                     /locus_tag="VF991_22010"
     CDS             <1..1077
                     /locus_tag="VF991_22010"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9559184.1"
                     /translation="QAQSRLKMIEKLGPIASVPIEERIAFKFPSPELLASPIETLDEV
                     AVGYAGGPPILRGLDLRVDMEDRIALLGQNGNGKSTFIRLLSDRLQPRAGRVRRVPRL
                     RIGYFSQDQEESLDYEATPFQHMSSALGSGAGETKVRAQLGRFGFSRDRANLKVGVLS
                     GGEKTRLLLSLATRNAPHLLLLDEPTNHLDMDARASLVEAINDFEGAVVLVSHDTHLV
                     KMIADQLWLVAGGKVTPFDGDIDDYQAKLLRERGNGKAAKRKEAPAPVAESAPKKDQR
                     KQSADARAKRAPLKRALESLEKNIARLNKQRDDIEARLADPEIYSDPAINVADLQREK
                     VQLEREIAHAEHEWLVAQDAYEAA"
     gene            complement(1088..2311)
                     /locus_tag="VF991_22015"
     CDS             complement(1088..2311)
                     /locus_tag="VF991_22015"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559185.1"
                     /translation="MSAATAPLNRDVRVIGLIGIAHGVSHYYQLAFVTMLLIVRQEAG
                     FTYTDVGLLAGIFYGVSGISQTAAGFAVDRFGARPILAGGLATIGVALGLISVVHSFP
                     GFAAIAVIAGLGNCVFHPADFALLNSSVDQGRLGRAYSVHGVGGSLGWAAAPVMYFLD
                     SMFGWVGAALIGAMPGLLLAALVWLHRDELVDHRVKVRAAAGGHATTPTLSLFLQPAI
                     LLCMVYFALLSANTTGIQQFAVPAWASMFGISENYAALCLIVFIVGSAGGVLVGGLFA
                     DRVRRHDRVATLGLLAAAAFTVPIATQTVTPALLLPLLALGGAAGGLTNPSRDMIVRS
                     ATPPGASGKVFGFVYSGLDVGSFLAPPVFGFLMSAGIPSIIFWIAVALYIVNAVLVMA
                     IRQTTVPTVATAAAE"
     gene            2447..>2864
                     /locus_tag="VF991_22020"
     CDS             2447..>2864
                     /locus_tag="VF991_22020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX9559186.1"
                     /translation="MKRWKYRPEGSTWGDWGDDDQLGRLNLITPKKVLEGVAEVKEGI
                     SFCLSLPLDLPGGNVLNPRRLPPVLSPTGDENGWRFNFLTNTINPLFRDVASDDRVIL
                     TLQYSTQWDTLAHVGGMFDADGDGVPEPLYYNGFKAG"
BASE COUNT          579 a          936 c          971 g          378 t
ORIGIN      
        1 caggcccaat cgcgcctcaa gatgatcgag aaactgggtc cgatcgcctc agtgccgatc
       61 gaggagcgca tcgccttcaa gttcccgtca cccgagctgc tggcctcgcc gatcgagacg
      121 ctcgacgagg tcgcggtcgg ctacgccggc ggaccgccga tcctgcgcgg cctcgatctg
      181 cgcgtcgaca tggaagaccg catcgccttg ctgggccaga acggcaacgg caagtcgacc
      241 ttcatccgcc tgctgtcgga ccgcctgcag ccgcgcgcgg ggcgggtcag gcgcgtgccg
      301 cggctgcgca tcggctactt ctcgcaggac caggaggaga gcctcgacta cgaggcgacg
      361 ccgttccagc acatgagcag cgccctggga tcgggcgccg gcgagaccaa ggtgcgcgcc
      421 cagctcggcc gcttcggctt ctcgcgcgat cgcgccaacc tcaaggtcgg ggtgctgtcg
      481 ggtggcgaga agacgcggct tctgctgtcg ctcgccaccc gcaacgcacc acatctgctg
      541 ctgctcgacg agccgaccaa tcatctcgac atggatgcgc gcgcgtccct ggtcgaggcc
      601 atcaacgatt tcgagggcgc agtcgtgctg gtgagccacg acacccacct ggtgaaaatg
      661 atcgccgatc agctctggct ggtcgcaggc ggcaaggtga cgccattcga cggcgacatc
      721 gacgactacc aggcgaagct gctgcgcgaa cgcggcaacg gcaaggcggc caagcgcaag
      781 gaagcgccgg cgcccgtcgc cgaatcggcg cccaagaagg accagcgcaa gcagtcggcc
      841 gacgcgcgcg ccaaacgggc gccgctcaag cgggcgctgg aaagcctgga gaagaacatc
      901 gccaggctca acaagcagcg cgacgacatc gaagcgagat tggccgatcc ggagatttac
      961 agcgatccgg cgatcaacgt cgccgaccta cagcgagaga aggtccagct ggaacgcgag
     1021 attgcccacg ccgagcacga atggctggtg gcgcaggacg cctacgaagc cgcctagttg
     1081 ctggcggcta ctcggccgct gcggtagcca ccgtgggcac cgtcgtctgg cgaatggcca
     1141 tcaccagcac cgcgttgacg atgtagagcg ccacggcgat ccagaagatg atgctcggga
     1201 tgccggccga catcaggaag ccgaacaccg gcggcgccag gaacgagccg acgtcgaggc
     1261 cggagtagac gaagccgaag accttgcccg aggcgccggg cggcgtggcg ctgcgcacga
     1321 tcatgtcacg cgacgggttg gtgaggccgc cggcggcacc gcccagggcg agcaacggca
     1381 gcagcaacgc gggcgtgact gtctgggtgg cgatcggcac ggtgaaggcc gccgccgcga
     1441 gcagacccag cgtcgcgaca cggtcatggc gacgcacccg gtcggcaaac agtccgccca
     1501 ccagcacgcc gcccgccgag ccgacgatga acacgatcag gcagagcgcg gcgtagtttt
     1561 cgctgatgcc gaacatgctg gcccaggccg gcacggcgaa ttgctggatg cccgtggtgt
     1621 tggccgacag cagggcgaaa tagaccatgc agagcaggat cgcgggctgc aggaagagcg
     1681 acagggtcgg agtcgtggcg tgcccgccgg cagcggcgcg caccttgacg cgatggtcga
     1741 cgagttcgtc gcgatgcagc cacaccaatg ctgcgagcag caggccgggc atcgcgccga
     1801 tcagcgccgc cccgacccag ccgaacatgc tgtcgagaaa gtacatcacc ggcgcggccg
     1861 cccaaccaag cgagccgccg acgccatgaa cgctgtaggc gcggccaagc cggccctggt
     1921 caaccgacga attcagaagc gcgaaatctg caggatggaa cacgcagttg ccgaggcctg
     1981 cgatcacggc gatggcggca aagcctggga acgaatggac gacggagatc aggccaagcg
     2041 ccacaccgat ggtcgcaagc ccgccggcca ggatcggccg ggcaccgaaa cgatcgaccg
     2101 caaagcccgc tgccgtctgc gagatgccgg atacgccgta gaagatgccg gccagcaggc
     2161 cgacatcggt gtaggtgaag cccgcctcct ggcgcacgat cagcagcatc gtgacgaagg
     2221 cgagctgata gtagtggctg acgccatggg cgatgccgat caggccgatg accctgacgt
     2281 cgcgattgag cggagcggtc gctgcggaca tgaaaacctc ttcgagacgg atgatagacg
     2341 atccgccgtg cgaacgtttg cggaattgcg cggaggagcc atgcgtgcgt ggtgacgcac
     2401 ggccgaaacg caaggtagtc tccacccagc cacagggaga tcacgaatga agcgctggaa
     2461 gtaccgtccg gaaggctcga cctggggcga ttggggtgac gacgatcaac tcggccggct
     2521 caatctgatc acgccgaaga aagtgctcga aggcgtcgcc gaagtgaagg aaggcatctc
     2581 cttctgcctc agcttgccgc tcgatctgcc cggcggcaac gtgctgaacc cgcggcggct
     2641 gccgcccgtg ctttcgccga cgggcgacga gaacggctgg cggttcaact tcctcaccaa
     2701 cacgatcaac ccgctgttca gggacgtggc gagcgacgac cgcgtgatcc tgaccctgca
     2761 atactccacg cagtgggaca cgctcgccca tgtcggcggc atgttcgatg ccgatggcga
     2821 cggcgtaccc gagccgctct actacaacgg cttcaaggcg ggct
//
LOCUS       DASWGA010000960         1809 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2019785, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000960 DASWGA010000000
VERSION     DASWGA010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1809
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2019785"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..1667
                     /locus_tag="VF991_22025"
     CDS             78..1667
                     /locus_tag="VF991_22025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX9559187.1"
                     /translation="MRRQKKFYAWGYADEDLTPEEIKPWEAEIAQRYGLNSFDVTPPP
                     KPEEITLRAPRVSVPPGLQSIVRTDHLTRLEHSYGKAGFDTTRMFMRSVPHPPDAVAF
                     PENESDIVRLLDWCDEIGAKAIPYGGGSSVVKGIEPPAAAEKVLTISTRHMDKVLEVD
                     AVSQAARIQGGVYGPAIEDQLRDTPFTMRHYMQAYRCSTLGGWIATRSGGHYATLYTH
                     IDDFVESTRVVTPAGTLETRRLPGSGAGPSPDRMFLGSEGILGIITEAWVRLRKKPTF
                     RASASVRFKNFFAGADAVRGITQAGLYPANCRLLEAREALPGIPWSSEEAVLVLAFES
                     ADHPLDAWMARALEICRDHGGVADPTADDENAHRSGAAGAWRNKFIRAPHYGEHAVAR
                     GILSSTFETSMTWERFRDFHQKISQITRDTIKRVTGRDGTVTCRFTHVYPDGPCLYFT
                     FGGILDKRIALDQLMEVLSTCTAATVEHGGTTTHHHAVGRFHRPFYDKQRPELFARAL
                     RGAKRELDPKGMMNPGVLIDP"
BASE COUNT          307 a          637 c          579 g          286 t
ORIGIN      
        1 tcgcatcatg catcgcaccc agatcaaggg cggcagcaag ccgatggcct tcgccgcctg
       61 aacacaagga caacagcatg agacggcaga agaagtttta cgcctggggc tatgccgacg
      121 aggacctgac gccggaagaa atcaagccgt gggaagccga gatcgcccag cgctacggcc
      181 tcaacagttt tgacgtgacg ccgccgccca agcccgaaga gatcaccttg cgcgccccgc
      241 gcgtctcggt gccgcccgga ctgcagtcga tcgttcggac cgaccacctg acgcggctgg
      301 aacacagcta cggcaaggcg ggcttcgaca ccacgcgcat gttcatgcgc tcggtgcccc
      361 atccgccgga cgccgtggcg tttcccgaga acgagtccga catcgtgcgc ctgctcgact
      421 ggtgcgatga gatcggcgcc aaggcgatcc cctatggcgg cggctcctcg gtggtgaagg
      481 gcatcgagcc gccggccgcg gccgagaagg ttttaaccat ctcgacgcgc cacatggaca
      541 aggtgctgga ggtcgacgcg gtgagccagg ccgcgcgcat ccagggtggc gtctacggtc
      601 cggccatcga ggaccagttg cgcgacacgc ccttcaccat gcgccactac atgcaggcct
      661 atcgctgctc gacccttggc ggctggatcg ccacgcgctc gggcggccac tacgccacgc
      721 tctacaccca catcgacgac ttcgtcgaaa gcacccgggt ggtgacgccg gccggcacct
      781 tggagacgcg ccgcctgccg ggctccggcg cggggcccag ccctgaccgg atgtttttag
      841 gctccgaggg gattttgggc atcatcaccg aagcctgggt gcggctgcgc aagaagccga
      901 ccttccgcgc ctcggcgtcg gtacgcttca aaaatttttt cgccggtgcc gacgcggtgc
      961 gtggcatcac ccaggcaggc ctctatcccg ccaattgccg attgctcgaa gcacgcgagg
     1021 cgctacccgg cattccgtgg agcagcgagg aggcggtgct ggtgctggcc ttcgaatcgg
     1081 ccgatcaccc gctcgatgcc tggatggcgc gggcgctgga gatctgccgc gaccatggcg
     1141 gcgtggccga tccgacggcc gacgacgaga acgcgcaccg ctccggcgcc gccggtgcgt
     1201 ggcgtaacaa gttcatccgc gcgccacact atggcgagca tgccgtggcc cgcggcatcc
     1261 tgtcctcgac cttcgagacc tcgatgacct gggagcgctt ccgcgacttc caccagaaga
     1321 tctcccagat cacccgggac acgatcaagc gcgtgacggg ccgcgacggc acggtcacct
     1381 gccgcttcac ccatgtctat cccgacgggc cctgcctcta cttcaccttc ggtggcattt
     1441 tggacaagcg catcgcgctc gatcagctca tggaagtgct gtcgacctgc acggcggcga
     1501 cggtcgagca cggcggcacc accacgcacc atcacgccgt cggccgcttc caccggccgt
     1561 tctatgacaa gcagcggccc gagctgtttg cccgcgcgtt gcgcggcgcc aagcgcgagc
     1621 tcgatcctaa ggggatgatg aatcccggcg tgctgatcga cccctgagat ggacggtctc
     1681 agcggtcccc tgttggcgtt cctcggcatc tccgccctgg tgatcgcgac gccggggccg
     1741 gacaccgcca tcaccattcg caacagcctg gcgggtggcc gcgccgccgg cctggcgacg
     1801 gcggccggc
//
LOCUS       DASWGA010000961         2775 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_234170, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000961 DASWGA010000000
VERSION     DASWGA010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2775
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234170"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..923
                     /locus_tag="VF991_22030"
     CDS             30..923
                     /locus_tag="VF991_22030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEX9559188.1"
                     /translation="MPARGQPMKIRLGTATPGGGFPVYGAAFVEGVRRFDPDLEIEAV
                     NTKGSTENVPMLEAGTLDIALVQGEVVHEALSGIGRPPADLKVITAMYPTAGMFVVRA
                     DSSYRRVADLKGKPIAWGAQGSGLVILGRYAMDGLGLDAQKDFQPIYLERAGDGPAMV
                     LDGRAAALWGGGTGWPGFMTVAKSERGARFIAPDADDIRRILAKHSFLKPVTQAAGSF
                     PGQSEAIASVGSWSFVLARPGLDEMAAYRLAKALHELERSGNPPPQLVDTTTKNTLAA
                     APPGRLHAGVARYFREAGLGK"
     gene            973..1206
                     /locus_tag="VF991_22035"
     CDS             973..1206
                     /locus_tag="VF991_22035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559189.1"
                     /translation="MADKPKKDGKIEGEGSYSGTRAYNEATAKFLKGKVDEAARDAER
                     ALESKEGADLKAAEAKGKAGDPKGWEKASSRPK"
     gene            1253..>2775
                     /locus_tag="VF991_22040"
     CDS             1253..>2775
                     /locus_tag="VF991_22040"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEX9559190.1"
                     /translation="MALSTNPRRRMVRRQIASRGIDDRRVLAAMETVPREAFLADAMR
                     EFAYEDTPLPIEEGQTISQPYIVARMAEAAHVGPGDRVLEIGAGSGYAAAVLGELAQR
                     VFTIERHAALADLARARLRQLGSDNVEVRTGDGTLGWPEQAPFDAIIATAAGPRIPET
                     LRAQLAVGGRLVMPVGKTRSAQKLIRLTRTGPDTWHQEEIEEVRFVPLIGEQGWAEDE
                     AREAPAQRPPAGLPQLIQAAARPLPEFDDPEFAATFDRYGDRKVVLLGEASHGTSEFY
                     RARAAITRRLIERHGFSFLAVEADWPDALTIDRYVRHLPVRPGARPAFRRFPTWMWRN
                     TDVEAFVEWLRGHNDGVAPDRRAGFFGLDIYSLSDSIAAVLAYLDKVDPEGAKIARER
                     YGCLTPWQHDPAVYGRAVLSERYRQCEADVVAALGDLLTKRLEYAHRDGEQFFDATQN
                     ARLVAAAERYYRAMYYGSAESWNLRDRHMFDTLHQLLEHRGPDAKAVVWAHNSHIGDA
                     "
BASE COUNT          448 a          972 c          937 g          418 t
ORIGIN      
        1 tgttcgccgc cgccgcttcc gtcgcggcgc tgccggcgcg aggccagccg atgaagatcc
       61 gcctgggcac cgccacgccc ggcggcggct tcccggtcta tggcgccgcc ttcgtcgagg
      121 gcgtgcgccg cttcgatccc gacctggaga tcgaggccgt caacaccaag ggcagcaccg
      181 agaacgtgcc gatgctggaa gccggcacgc tcgacatcgc cctggtgcag ggcgaggtgg
      241 tgcacgaagc gctgtcgggc atcggccggc cgccggcgga tctaaaagtc atcacggcga
      301 tgtatcccac cgcgggcatg ttcgtcgtgc gcgccgattc aagctatcgc cgcgttgccg
      361 atctcaaggg caagcccatc gcctgggggg cgcaagggtc gggcctggtg atcctcggcc
      421 gttatgccat ggatgggctg ggcctcgacg cccagaagga tttccagccg atctatctcg
      481 agcgcgcggg cgacgggccg gccatggtgc tcgacggccg cgccgcggcg ttgtggggcg
      541 gcggcaccgg ctggccggga ttcatgacgg tggccaagag cgagcggggt gcccgcttca
      601 ttgcgcccga tgccgacgac atccgccgca ttctcgccaa acattccttc ctcaagccgg
      661 tgacgcaggc cgccggcagc ttccccggcc agagcgaggc gatcgcctcg gtgggctctt
      721 ggagcttcgt gctggcgcga cccggcctcg acgagatggc ggcctatcgc ctcgccaagg
      781 cgctgcacga gctggagcgg tccggaaatc cgccgccgca gctcgttgat accacgacaa
      841 agaatacgct cgccgccgcg ccgcccgggc gcctgcatgc cggcgtggcg cgctatttcc
      901 gcgaagcagg cctcggcaaa tagcccgtaa ccttgtgctt ttggttgcgt tcctcgaacc
      961 caggagcgcg cgatggctga caaaccgaaa aaggacggca aaatcgaggg cgagggcagc
     1021 tacagcggca cccgtgccta caacgaggcg accgccaaat tcctgaaggg caaggtcgat
     1081 gaagccgccc gcgatgccga gcgcgcgctc gagtccaagg aaggcgccga cctgaaagcg
     1141 gccgaagcca agggcaaagc cggcgatccc aagggctggg agaaggcttc cagccgcccg
     1201 aaatagccgc ctaaaaccgg caactcccgt cggcgcgggt cgtttgggac tcatggccct
     1261 gtcgaccaac ccgcgccggc ggatggtccg ccgtcagatc gccagccgcg gcatcgacga
     1321 ccggcgcgtg ctcgcggcga tggagacggt accgcgcgag gctttcctgg ccgatgcgat
     1381 gcgtgagttc gcctacgaag acacgcctct gcccatcgag gaaggccaga ccatttcgca
     1441 gccgtacatc gtggcgcgca tggccgaagc ggcccatgtc ggtcccggtg accgcgtcct
     1501 cgagatcggc gcaggatcgg gctatgcggc cgcggtgctg ggcgaactcg cccagcgcgt
     1561 cttcaccatc gagcgtcatg ccgcgctggc cgatctggcg cgcgcccgcc tgcgccagtt
     1621 gggatccgac aatgtcgagg tgcgcaccgg cgacggcacc ttgggctggc ccgagcaggc
     1681 accgttcgac gccatcatcg ccaccgccgc cggcccgcgc atccccgaga cgctgcgcgc
     1741 ccagctcgct gtcggcggcc ggctggtgat gccggtcggc aagacgcgca gcgcccagaa
     1801 gctgatccgc ctcacccgca ccggccccga cacctggcac caggaggaaa tcgaagaggt
     1861 ccgcttcgtg ccgttgatcg gcgaacaggg ctgggccgag gacgaggcgc gggaagcgcc
     1921 ggcacaacgt ccgccggccg gcttgccgca gctgatccag gccgccgcgc ggccgctgcc
     1981 cgagttcgac gatccggagt tcgccgccac cttcgatcgc tatggcgatc gcaaggtggt
     2041 gctgctgggc gaggcgagcc acggcacgtc ggagttctat cgcgcgcgcg ccgccatcac
     2101 gcggcgcttg atcgagcgcc acggtttcag cttcctcgcc gtcgaggccg actggcccga
     2161 cgcgctcacc atcgatcgct atgtgcgcca tctgccggtg cggcccggcg cgcgcccggc
     2221 gttccgccgt ttcccgacct ggatgtggcg caataccgac gtcgaggcct tcgtcgaatg
     2281 gctgcgcggc cacaacgacg gcgttgcccc ggatcgccgc gccggcttct tcggcctcga
     2341 catctacagt ctgtcggatt cgatcgccgc cgttctggcc tatctcgaca aggtcgatcc
     2401 cgagggggcc aagatcgcgc gcgagcgcta cggctgcctc acgccctggc agcacgatcc
     2461 ggcggtctat ggccgagccg tgttgagcga gcgctatcgc cagtgcgaag ccgacgtcgt
     2521 cgctgccctc ggggatcttc tgaccaagcg gctggaatac gcccatcgcg acggcgagca
     2581 gttcttcgac gctacgcaaa atgcccgcct ggtggcggcg gccgagcgct actaccgcgc
     2641 catgtactat ggcagcgccg agagctggaa cctgcgcgat cgccacatgt tcgacacgct
     2701 gcatcagctg ctcgaacatc gaggacccga tgccaaggca gtggtctggg cgcacaattc
     2761 ccatatcggc gatgc
//
LOCUS       DASWGA010000962         2108 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2517160, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000962 DASWGA010000000
VERSION     DASWGA010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2517160"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VF991_22045"
     CDS             complement(<1..207)
                     /locus_tag="VF991_22045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559191.1"
                     /translation="MRPPLFPRLLVPRLPFFYGWVVLCCICLAGFARQGPAVAVLSVF
                     VVPMTDAFGWSRTEMSGAVSLGGVL"
     gene            340..930
                     /locus_tag="VF991_22050"
     CDS             340..930
                     /locus_tag="VF991_22050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea carboxylase-associated family protein"
                     /protein_id="HEX9559192.1"
                     /translation="METIPARRGKASYLKRGQSIRIVNTHGTQVVDTWAFTAGMLTEF
                     MSMEHTRATLVSMRPKVGDGLYTNRRRKILTMTEDTSRGDHDTLMAACDSERYILLGV
                     KEYHDNCTDNLFAAMQALGLTPPECPSPLNLFMNIPWTPAGGLSFDPPTTKPGDFVTL
                     RAELDCIVAMSACPQDILPINGKTGTTTEAHYEIVG"
     gene            934..1590
                     /locus_tag="VF991_22055"
     CDS             934..1590
                     /locus_tag="VF991_22055"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HEX9559193.1"
                     /translation="MTFSIAGRCVRTGMLGAVVTTSSMAVGSRCAWAEANVGAVLTQH
                     RTDPRLGPKILERLKTGSSPEAILRDLEGADPDLQWRQLAVIDAKGKGAFFNGAKILS
                     ASKGKVGRNCVAAGNILRSTAVVDAMISSFEENEAQPLAERLVRAIEAGDAAGGELKQ
                     LKSAGLLVVHRESFPFVDLRVDLNSQPLVELRFLWELYQPTADNYVVRALDPDKAPGG
                     "
     gene            1593..>2108
                     /locus_tag="VF991_22060"
     CDS             1593..>2108
                     /locus_tag="VF991_22060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559194.1"
                     /translation="MAKLTLSVAVGDYDRTWPLIDGTVQIDGVDPIIMTLSPEEIFFR
                     AFRDAPFDICELSLSSFAVKTAAGDCPYVGVPAFLSRAFRHTSIYVRKDRIARPHDLK
                     GRRIGVAEYQLTANVWARALLADHGVSPSDVVWITGGLEEPGRLEKVAVALPPAIRRE
                     AAPDGATLSGLL"
BASE COUNT          402 a          733 c          654 g          319 t
ORIGIN      
        1 cagcacgccg cccagcgaca ccgcgcccga catctcggtg cgcgaccagc cgaaggcatc
       61 ggtcatcggc acgacaaaaa ccgacagcac ggccacggcc ggcccctggc gcgcgaagcc
      121 ggccaggcaa atgcagcaca gcacgaccca accgtagaaa aacggcaggc gcggcacgag
      181 caggcgggga aaaagcggcg ggcgcatcgg cgtggccgcc caccctactg cgcagaccag
      241 tggggaccaa cgcttccggc cgacaaagtt cacatgaggt caaacgggac gggctaagat
      301 caaacggcgt tctgatcagc gagtgaaggg acccgagcga tggagaccat ccctgcgcgc
      361 cgcggcaagg ccagctacct caagcgcggc cagtcgatcc gcatcgtcaa cacgcatggc
      421 acgcaggtgg tggatacctg ggcgttcacc gccggcatgc tcaccgagtt catgtccatg
      481 gaacacaccc gcgccacgct cgtcagcatg cgcccgaagg tgggtgacgg gctctacacc
      541 aaccgccgcc gcaagatact gacgatgacc gaagacacca gccgcggcga ccacgacacg
      601 ctgatggcgg cgtgcgacag cgaacgctat atcttgctgg gcgtgaagga ataccacgac
      661 aactgcaccg acaacctgtt cgcggcaatg caggccctcg gtctgacacc gccggaatgc
      721 ccgagcccgc tgaacctgtt catgaacatt ccctggacgc ccgccggcgg gctttccttc
      781 gatccgccga cgaccaagcc cggcgacttc gtgaccttgc gggccgagct cgactgcatc
      841 gtggccatgt cggcctgtcc gcaggacatc ctgccgatca acggcaagac cggcaccacg
      901 accgaggcgc actacgagat cgtcggctga accatgactt tttccatcgc cgggcggtgc
      961 gtcaggacag gaatgctggg cgccgtcgtc accacttcat ccatggcggt cggcagccga
     1021 tgcgcgtggg ccgaggccaa tgtgggcgcc gtcctgacgc agcatcgtac cgatccgcgc
     1081 ctcggcccca agattctcga acggctcaaa accgggtcct cgcccgaggc aatcctccgg
     1141 gacctcgagg gagccgatcc ggacctgcaa tggcggcagc tcgccgttat tgacgcaaag
     1201 gggaaaggcg ccttcttcaa cggtgccaag atcctctcgg cgtcgaaggg caaggtcggc
     1261 cgcaattgcg tggcagcggg caacatcctg cgcagcaccg ccgttgtcga cgccatgatt
     1321 tcgagcttcg aggaaaacga agcccagcct ttggcggagc ggctcgtgcg tgccatcgag
     1381 gccggcgacg ccgccggcgg tgaactgaag caattgaagt ccgccggcct tctcgtcgtg
     1441 caccgggaaa gctttccctt cgtcgacttg cgcgtcgatc tcaattccca gcctctcgtc
     1501 gaactacgtt tcctgtggga gctttaccag ccgacggcgg acaactatgt cgtgcgcgcc
     1561 ctcgatccgg acaaagcgcc agggggatga tgatggccaa gctcaccctg tccgtcgcgg
     1621 tcggagacta cgaccgcacc tggccgctga tcgacggcac ggtccagatc gacggcgtcg
     1681 acccgatcat tatgacgctc agccccgagg agatcttctt ccgcgccttt cgcgacgcgc
     1741 ccttcgacat ctgcgagctc tcgctgtcga gtttcgcggt caagacggcc gccggcgatt
     1801 gcccctatgt cggcgtgccg gccttcctgt cgcgcgcgtt ccgccacacc tcgatctacg
     1861 tgcgcaagga tcggatcgcg cgaccgcacg acctgaaggg acgacggatc ggcgtcgccg
     1921 agtaccagtt gaccgccaat gtatgggccc gcgccctcct cgccgaccat ggcgtgtcgc
     1981 cgtccgacgt cgtctggatc acgggcggcc tcgaggagcc cggacgcctc gagaaggtcg
     2041 ccgtggcgct accgccggcg atacgccgcg aagcggcgcc cgacggcgcc acgctttcag
     2101 gcctgctc
//
LOCUS       DASWGA010000963         2523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1001072, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000963 DASWGA010000000
VERSION     DASWGA010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001072"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2523
                     /locus_tag="VF991_22065"
     CDS             <1..>2523
                     /locus_tag="VF991_22065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9559195.1"
                     /translation="SLPMSVQAQGVVVQKKSTAILEIVALTSPDGRYDSLYMSNYATI
                     NLINELARLPGVGNTQVLGVGQYSMRVWLDPQKLYTYGLTPSEVTLVIQQQSQPVTAG
                     QVGIPPAPKGQDFQYTVDVQGRLGTPEEFGNIIVKTDQGSGGRILRLKDIARVELGAQ
                     TYAQTFKLDGKQGAGIAIYQLPEANALDVANRVKAKMAELAKAFPQGLAYGVPFDTTE
                     FVKTSINEVFMTLIEAGILVLIVIMVFLQDWRAMLVPATTIPVTIIGAFAAMAALGFT
                     INTTTMFGIVLAIGIVVDDAIVIVEGVARHIERGMSSHDAAIQAMRELFGPVIGITLV
                     LMSVFLPAAFVPGLTGKMFAQFALVIAATAFISAVNAATLKPTQCAMWLRPTVPPEQR
                     NFFYRGFNNVYQRVENGYAGLVGAMVRRSGLMVLLAFVMAGLGGWGVARLPTAFIPNE
                     DQGYMLVGLLLPDGASLERTDAALAQVSAIAQATPGVQQVVAISGLSVLDNNSALANA
                     GVAYVILKDWGVREKQDGHDLRSIVGHIAREAQALQDGRAFPLVPPPIQGIGNAGGFQ
                     MQVEQRDGSFDYAKLQDATANVIEQAGTQSGLSNLITSFRAGAPHVRVEVDRSKAETL
                     KVSIGEVFTTLSSYLGSTFVNRFNKFGLSLQVFLQADSPYRTKPEDILKLQVRNADGQ
                     MVPIGALATLKQDQGPPLISLYNLYPSAAIVGSPAPGFSSGEAIALMDQIADQRLPPG
                     TGFEWTAMSYQENVVGNQLLYVFALAILLVYLCLAGQYESWVLPLAVILAVPLALIGP
                     AAALGAVGLANNLYTQIGLMLLIALGAKNAILIVEVAREARKI"
BASE COUNT          412 a          899 c          797 g          415 t
ORIGIN      
        1 tccctgccca tgtcggtgca ggcgcagggc gtcgtcgtgc aaaagaaatc gacggcgatc
       61 ctcgagatcg ttgcgctcac ctcgcccgac gggcgctacg acagcctgta catgagcaac
      121 tacgccacca tcaacctgat caacgagctg gcgcgcctgc ccggcgtcgg caacacgcag
      181 gtgctgggcg tcggtcaata ctcgatgcgc gtctggctcg acccgcagaa gctctacacc
      241 tatgggctca cgccgtcgga ggtgaccctg gttatccagc agcagagcca gccggtgacg
      301 gcgggccagg tcggcatccc gccggcgccc aagggccagg atttccagta caccgtcgac
      361 gtccagggcc gcctcggcac gccggaggag ttcggcaaca tcatcgtcaa gaccgaccag
      421 ggcagcggcg gacgcatcct gcgcctcaag gacatcgccc gcgtcgagct cggcgcccag
      481 acctacgccc agaccttcaa gctcgacggc aagcaaggcg ccggcatcgc catctaccag
      541 cttcccgagg ccaacgcgct cgacgtcgcc aaccgggtca aggccaagat ggccgagctt
      601 gccaaggcct tcccgcaggg cctcgcctac ggcgtgccgt tcgacaccac ggagttcgtg
      661 aagacctcga tcaacgaggt gttcatgacc ctgatcgagg ccggcatcct ggtgctgatc
      721 gtgatcatgg tgttcctgca ggactggcgc gccatgctgg tgccggcgac gaccatcccg
      781 gtgaccatca tcggcgcctt cgccgccatg gcggcactcg gcttcaccat caacacgacg
      841 accatgttcg gcatcgtgct ggcgatcggc atcgtcgtcg acgacgcgat cgtgatcgtc
      901 gaaggcgtgg cccgccatat cgagcgcggc atgtcgagcc acgacgccgc catccaggcg
      961 atgcgcgagc tgttcgggcc ggtgatcggc atcacgctgg tgctgatgtc ggtcttcctg
     1021 ccggcggcgt tcgtgcccgg cctgaccggc aagatgttcg cccagttcgc gctggtcatc
     1081 gccgccaccg cgttcatcag cgcggtcaac gccgccacgc tgaagcccac ccagtgcgcc
     1141 atgtggctca ggcccaccgt gccgcccgag cagcgcaact tcttctaccg cggcttcaac
     1201 aacgtctacc agcgcgtcga gaacggctat gccggcctgg tcggcgccat ggtgcggcgc
     1261 tcgggcctca tggtcctgct cgccttcgtc atggccggcc tgggcggctg gggcgtcgcg
     1321 cggctgccga cggcgttcat tcccaacgaa gaccagggct acatgctggt cggcctgctg
     1381 cttcccgacg gcgcctcgct ggagcgcact gacgccgccc tcgcccaggt cagcgcgatc
     1441 gcccaggcga cgcccggcgt gcagcaggtc gtggcgatct ccggcctgtc ggtgctcgac
     1501 aacaactccg ccttggccaa tgccggcgtc gcctacgtga tcctcaagga ttggggcgtg
     1561 cgcgagaagc aggacggcca cgacctgcgg tcgatcgtcg ggcacatcgc gcgcgaagct
     1621 caggcgctgc aggacggccg ggccttcccg ctggtgccgc cgccgatcca gggcatcggc
     1681 aatgccggcg gcttccagat gcaggtcgag caacgcgacg gcagcttcga ctacgccaag
     1741 ctgcaggacg cgacggcgaa cgtcatcgag caagccggca cgcagtcggg tctttcgaac
     1801 ctcatcacct cgttccgcgc cggcgcgccg catgtccgcg tcgaggtcga ccgctccaag
     1861 gcggagacct tgaaggtgtc gatcggcgag gtgttcacga cgctgtcgtc ctacctcggc
     1921 tcgaccttcg tcaaccgctt caacaagttc ggcttgagcc tgcaggtttt cctccaggcc
     1981 gattcgccct accggaccaa gcccgaggac atcctgaaac tgcaggtccg caacgccgac
     2041 ggccagatgg tgccgatcgg cgcgctcgcc accctgaagc aggaccaggg cccgccgctg
     2101 atcagcctct acaatctcta tccgtcggcg gcgatcgtgg gctcgccggc gccgggcttc
     2161 agctcgggcg aggcgatcgc gctgatggac cagatcgccg accagaggct gccgcccggc
     2221 accggcttcg aatggacggc gatgtcgtat caggagaacg tcgtcggcaa tcagctgctc
     2281 tacgtcttcg ccctggcgat cctgctggtc tatctctgcc tcgccggcca atacgagagc
     2341 tgggtcctgc cgctggccgt gatcctggcc gtgccgctgg cgctgatcgg tcctgcggcc
     2401 gcgctcggcg ccgttgggct cgccaacaac ctctacaccc agatcggcct gatgctgctg
     2461 atcgcactcg gcgccaagaa cgccatcctg atcgtcgagg tcgcgcgcga agcccgcaag
     2521 atc
//
LOCUS       DASWGA010000964         3131 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2020813, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000964 DASWGA010000000
VERSION     DASWGA010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3131
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2020813"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2153)
                     /locus_tag="VF991_22070"
     CDS             complement(<1..2153)
                     /locus_tag="VF991_22070"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX9559196.1"
                     /translation="MSAVDALVLATEAQRRATTPGHSAWVEANAGTGKTKVLTDRVTR
                     LLLDGVKPERILCLTFTKAAAAEMRNRLASQLGRWALADEHRLDQEIELLIDRPPGPA
                     ERIVARRLFARVLDAPGGINILTIHAFCQALLKRFPLEAGVAPGFEVLDETEAQALLR
                     HAQDEQMEALARPDAPTVLVDALASVAGRISVTEYADLMLKLLGERAWLLARVGNDAG
                     LRGVRDRLAREMGCAPDDTADGLRSNACLEAAFDAPGLRAALQALAKGSPQDAERAEL
                     LAAWLAADDRPALLSAYAKAFFTESGKIRERLATKAAISAMPGIEGVLRAEAERLAEV
                     LDRINGAELVERTLALLRLGLDIAERYSRAKRRRATLDYDDLIVATRRLLESASSAAW
                     VLYKLDGGIDHVLVDEAQDTNPDQWEVIRRLTEEFFVGQGAVERSRTVFAVGDTKQSI
                     FGFQRADPRKLKEMREWFEGKSRIAEQRFVPVALNVSFRSTPAVLDAVDWVFGQPDSA
                     RGVAEPGLLSHLPSRKEEPGRVELWPLVSAPEAEIDTTDIEGRQSALALPHQRLARLI
                     AAHAKGLIGKERRARKGELLHAGHFMVLVRRRNAFVNALVQALKREGIEVAGVDRLNL
                     GEELAIQDLLALARFVLLPQDDLNLACLLKSPLIGLDEEQLFTLAWKRTGHLWRALRE
                     RAGEKPFAAAHARLAGWLKRADYITPFDFFAEALGP"
     gene            complement(2150..>3131)
                     /locus_tag="VF991_22075"
     CDS             complement(2150..>3131)
                     /locus_tag="VF991_22075"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEX9559197.1"
                     /translation="FGYEPGSTAPPPEYIQRGRRSYLAWADALDRPESYRPWPRPEPR
                     PPLEARPTRLSVSSIEQWRRDPYGLYARRILGLEALDPLEAELGAADRGLALHDALDE
                     FLRAYPSGLLPAEAIAEFEELGERHLAKLLIAPAERAFWWPRFQRLARWFVGTENARR
                     AAGTRLLASETNGAITVGPTGRPLRIEARADRIDEIEPGGWEIIDYKTGRVPSPKELD
                     GLFAPQLLLEAAMAEQGGFEGIKGKARAVHLSYWQANGLGNGGEVKEIKDGEQLVPAM
                     LALVARMAEHFANPSTPYAALPWPEFIPHFNDYAHLERIAEWSTAGGGEE"
BASE COUNT          481 a         1101 c         1056 g          493 t
ORIGIN      
        1 ggaccgagcg cctcggcaaa gaaatcgaac ggcgtgatgt agtccgcgcg cttcagccag
       61 ccggcgagcc gcgcatgggc cgcggcgaac ggcttctcgc cggcgcgctc gcgcagcgcg
      121 cgccatagat ggccggtccg cttccacgcc aacgtgaaaa gctgttcttc gtcgaggccg
      181 atcaacggcg acttcagcag gcaggcgagg ttgagatcgt cctgcggcaa cagcacgaag
      241 cgcgccagcg ccagcagatc ctggatcgcc agctcctcgc ccaggttcag gcggtcgacg
      301 cccgccacct cgataccctc gcgcttcagc gcctgcacca gtgcattgac gaacgcgttg
      361 cgccgccgca ccaacaccat gaaatgaccg gcatgcagca gctcgccctt gcgggcgcgg
      421 cgttccttgc cgatcaggcc cttggcatgc gccgcgatca gccgcgccag acgctggtgc
      481 ggcagcgcca gcgcgctttg cctgccctcg atgtcggtcg tgtcgatttc ggcctcgggt
      541 gcgctcacca gcggccatag ctcgacccgg ccgggctcct ccttgcggct ggggaggtgg
      601 ctcaagaggc ccggctcggc cacgccgcgt gcagagtcgg gctggccgaa cacccagtcg
      661 acggcgtcga gcacggcagg cgtcgaacgg aacgagacat tgagggcgac gggcacgaag
      721 cgctgctcgg cgatgcggct cttgccctcg aaccactcgc gcatttcctt gagcttgcgc
      781 ggatcggccc gctggaagcc gaagatcgac tgcttggtgt cgccgacggc gaacaccgtg
      841 cggctgcgct cgaccgcgcc ttggcctaca aagaattcct cggtcagacg gcggatcacc
      901 tcccactggt cgggattggt gtcctgcgct tcgtcgacca gcacatggtc gatgccgccg
      961 tcgagcttgt agagcaccca ggccgcactc gaagcacttt ccaaaaggcg gcgcgtcgcg
     1021 acgatcaggt cgtcatagtc aagcgtggcc cgccgccgct tggcgcggct gtagcgctcg
     1081 gcgatgtcga ggccgagccg cagcagcgcc agggtgcgtt cgaccaattc agcgccgttg
     1141 atgcgatcga gcacctcggc cagccgctcg gcctcggcgc gcagcacgcc ttcgatgccg
     1201 ggcatcgccg agatggcggc tttggtggcg agccgctcgc gaatcttgcc gctttcggtg
     1261 aagaaggctt tggcgtaggc ggacagaagc gccggccggt cgtcggccgc caaccaagcg
     1321 gcgagcagtt ccgcgcgctc ggcatcctgc ggactacctt tggcgagcgc ttgcaacgcc
     1381 gcgcgaaggc cgggcgcgtc gaacgccgct tcgaggcagg cattactcct caggccgtcc
     1441 gccgtgtcgt ccggcgcgca gcccatctcc cgggccaggc ggtcgcgcac cccgcgaagt
     1501 cccgcgtcat tgccgacgcg cgccaacagc caggcgcgtt cgcccaaaag cttcagcatg
     1561 aggtcggcat actcggtgac tgaaatccgg ccggcgaccg aggccagcgc gtcgaccaag
     1621 acggtcggcg cgtcgggccg ggccagcgcc tccatctgct cgtcctgggc atgacgcagc
     1681 agggcctggg cctctgtttc gtcgagcacc tcgaaacccg gcgccacgcc tgcttccagg
     1741 ggaaagcgtt tcaacaacgc ctggcagaag gcatggatgg tgaggatgtt gatgccgccg
     1801 ggcgcgtcga gcacccgggc gaacagccgg cgcgccacga tccgctccgc aggccccggc
     1861 gggcggtcga tcagaagctc gatttcctgg tcgagcctgt gctcgtctgc cagcgcccag
     1921 cggccgagct ggctcgccag tcgattgcgc atctcggcag cggccgcctt ggtgaaggtg
     1981 aggcagagga tgcgctcggg tttcacgcca tccagcagca gcctggtcac gcgatcggtc
     2041 agcaccttgg tcttgccggt gccggcattg gcctcgaccc aggccgagtg acccggtgtc
     2101 gtggcgcgcc gttgcgcctc ggtcgccagc accagcgcgt ccaccgcgct cactcctcgc
     2161 ctccgcccgc cgtcgaccat tcggcgatgc gctcgagatg agcgtagtcg ttgaagtgcg
     2221 ggatgaattc gggccatggc agggcggcat agggcgtcga gggattggcg aagtgctcgg
     2281 ccattctggc gaccagcgcc agcattgccg gcaccagttg ctcgccgtcc ttgatctcct
     2341 tgacctcgcc gccattgccc aggccgttgg cctgccaata ggagaggtgc acggcgcgcg
     2401 ccttaccctt gattccctcg aagccgccct gctcggccat cgccgcttcg agcagcaact
     2461 gtggagcgaa caggccgtcg agctccttgg gcgagggcac gcggccggtc ttgtagtcga
     2521 taatctccca gccgcccggt tcgatctcgt cgatgcggtc ggcccgcgcc tcgatgcgca
     2581 acggtcgacc ggtcgggccg acggtgatgg cgccgttcgt ctcgctcgcc agcagcctgg
     2641 tgcccgccgc gcggcgggcg ttctcggtgc ccacgaacca acgcgccaga cgctgaaacc
     2701 gcggccacca gaaggcgcgt tccgccggcg cgatcaaaag cttggcgaga tgtctctccc
     2761 ccagctcctc gaattcggcg atcgcctcgg ccggcaaaag acccgacgga tacgcgcgca
     2821 ggaactcgtc gagcgcatcg tgcagcgcca agccgcggtc ggccgcgccg agttcggctt
     2881 ccagcggatc gagcgcctcc agccccagga tgcgccgcgc atagagtccg tacggatcgc
     2941 gccgccactg ttcgatgctc gagaccgaga gccgcgtcgg ccgcgcttcg agcggcggcc
     3001 ggggctcggg gcgcggccat ggccgatagc tttcaggccg atcgagcgcg tcggcccagg
     3061 caaggtagct gcggcgcccg cgctggatat attccggcgg cggcgcggta ctgccgggct
     3121 cgtagccgaa c
//
LOCUS       DASWGA010000965         3955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_753149, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000965 DASWGA010000000
VERSION     DASWGA010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3955
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_753149"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VF991_22080"
     CDS             complement(<1..317)
                     /locus_tag="VF991_22080"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9559198.1"
                     /translation="MRIRPNVRPARAAMLCALAIGLGVASNARSQSLIEALSTTYNSN
                     PDLLASRALLRQTDETLAQAVANWRPRVTLSLEYNKIEQDSLPVVRAPTYFLLNGRFT
                     TLQ"
     gene            complement(399..1055)
                     /locus_tag="VF991_22085"
     CDS             complement(399..1055)
                     /locus_tag="VF991_22085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEX9559199.1"
                     /translation="MTDFALARRNMIDSQLRPNRVTNAQLLAAIGELPRERFLPEAMR
                     SVAYSDDDVPLGNGRYLMEPMVLARLIQTLQTVADDRALVVGSGRGYGAALLARLTAS
                     VVAVESDPLLAAAAEQTAKGLGLGGIRQIVGPLEQGAPPGPYDAILIEGAVQLVPQAI
                     FDQLAEGGRLTTVVAGPPGAMGVAQLFVKEGGVTSGRPLFDAGTPSLPGFAPPPRFTF
                     "
     gene            1181..1254
                     /locus_tag="VF991_22090"
     tRNA            1181..1254
                     /locus_tag="VF991_22090"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1213..1215,aa:Cys,seq:gca)
     gene            1343..1417
                     /locus_tag="VF991_22095"
     tRNA            1343..1417
                     /locus_tag="VF991_22095"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1375..1377,aa:Asn,seq:gtt)
     gene            1471..2085
                     /locus_tag="VF991_22100"
     CDS             1471..2085
                     /locus_tag="VF991_22100"
                     /inference="COORDINATES: protein motif:HMM:TIGR00052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX9559200.1"
                     /translation="MPTPPLPNETVELVDHAVAFQGYFRVGRYFFRHGLYQGGQSGIL
                     KREVFERGHAAAVLPYDPLRDEIVLIRQFRAGAYVAGRHPWTWEIVAGILEGDESPEQ
                     LIRREAVEEAALEIRDVIPMHAVVLSPGACSETCATYLGRVDSAKAGGVYGLESEGEN
                     ILVKVLPFSEARAMLDRDEIGNALGVIALQWLALHRDEVRARWR"
     gene            2159..3160
                     /locus_tag="VF991_22105"
     CDS             2159..3160
                     /locus_tag="VF991_22105"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEX9559201.1"
                     /translation="MDVRSGFIDSIGNTPLIKLRAASDATGCNIYGKAEFLNPGGSVK
                     DRAALAIIEDAEKRGQLRPGGVIVEGTAGNTGIGIALVANARGYRSVIVMPETQSQEK
                     KDMLRLCGADLRLVPALPYANPGNYVRYSGTLAEELAAKEPNGAIWANQFDNVANRDG
                     HYRTTGPEIWDQTNGKVDGFTCSVGTGGTLGGVARALKERNPNVKIALSDPMGSAFYN
                     WHTKGELKAEGSSITEGIGNSRVTANLEGTPIDMVYQITDEEALPVLFDLIEHEGLVL
                     GGSTAINIVGAIRLARDLGPGKTVVTILADGGQRYQSKLFNPAFLREKNLPLPPWMK"
     gene            3171..>3955
                     /locus_tag="VF991_22110"
     CDS             3171..>3955
                     /locus_tag="VF991_22110"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019200 - carbohydrate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HEX9559202.1"
                     /translation="MSRVVVCGSLNMDVVVQSARRPAPGETLLGAAVSFLPGGKGLNQ
                     AVAAARLGAPTAMIGAVGNDAFANSLRGFLADNDVDSSGVRELDGPATGVALIQVAGK
                     DNAITVASGANLHFTKAMVRQAPQRHEVWVAQFETPLEVTEAILKRAQSAGARTVLNL
                     APFLPHPDRLMKVVDVAVLNEIELAQATRTKLQAASAMRDIVGACRKLHAKGARAVVA
                     TLGARGAVVVTAEDVVTVPALKAKVVDTTGAGDCFVGALAARM"
BASE COUNT          681 a         1343 c         1296 g          635 t
ORIGIN      
        1 aattggagcg tggtgaagcg gccgttcaac aagaagtagg tcggcgcgcg gacgaccggg
       61 agggagtcct gctcgatctt gttgtactcg agcgaaagcg tcaccctcgg tcgccagttg
      121 gcgaccgcct gggccagcgt ctcgtcggtc tggcgcagca gcgcccggct ggccagcagg
      181 tccggattgc tgttgtaggt cgtcgacagc gcctcgatca ggctctgcga cctggcattg
      241 gaagcgaccc ccaacccgat cgcgagggcg cacagcattg ctgcgcgcgc gggcctcacg
      301 ttgggccgga tacgcattta attaccctca tttgtgatcg gcaccctacc attggtcgga
      361 acggcattgg tagccccaga actgaccgac cgcggccatc aaaaagtgaa ccgtggcggg
      421 ggtgcgaagc ctgggagcga cggcgtgccg gcatcgaaaa gtggacggcc ggaggtcacg
      481 ccgccttcct tcacgaagag ctgcgcgacg cccatcgcgc cgggcgggcc ggcaacgacg
      541 gtcgtcaacc gtccaccctc cgccaactgg tcgaagatcg cctgcggcac tagctgaacg
      601 gcgccttcga tcaggatcgc atcgtaagga cccggaggag cgccctgctc cagcggaccg
      661 acgatctggc ggataccgcc aaggcccaat ccctttgccg tctgctcggc cgctgccgcc
      721 agcagcgggt cgctctcgac cgccacgacc gacgccgtca agcgggccag caacgcggcg
      781 ccgtagccgc ggcccgatcc gaccaccagg gcgcggtcat cggcgaccgt ttgcagggtc
      841 tggatcagcc gggcaagcac catgggctcc atgaggtagc gtccgttgcc gagcggcacg
      901 tcgtcgtccg agtaggcgac cgaccgcatc gcctcgggca ggaaccgctc cctcggcagc
      961 tcgccgatcg ccgccagcaa ctgggcattg gtcacccggt tgggcctcag ctggctgtcg
     1021 atcatgttgc ggcgcgcgag cgcaaaatcc gtcatcggct gacctctaca tattgagcag
     1081 ttttataggg ggcgcccgcc gatagcgtca aagggcgctc ggtcgcggcc gcttgaccct
     1141 tgttgcgcag catgcgtata gcaccgcccg ctcctcgtgc ggcctggtgg cagagtggct
     1201 atgcagcgga ctgcaaatcc gcgtatgccg gttcgattcc ggcccaggcc tccaggaatc
     1261 ctatcgggcc ttgcatggcc ggggatgctc tgtcaaaaca ccgcgcctcg cgacggtatt
     1321 accgcgccgg cgcgatttct gatccggagt agctcagcgg tagagcaggc ggctgttaac
     1381 cgccgggtcg gcggttcgaa tccgtcctcc ggagccactt ctgggccgct ctcgttcggg
     1441 agcggccctt tttgcatcgg gagtttctcc atgccgacgc ctcccctgcc caacgaaacg
     1501 gttgaactcg tcgaccatgc cgtggcgttc caaggttact tccgcgtcgg ccgctatttc
     1561 ttccgccatg gcctgtatca gggtggccag agcggcatcc tcaagcgcga agtcttcgag
     1621 cgcggacacg ctgccgcggt gctgccctac gatcctctgc gcgacgagat cgtcctgatc
     1681 cgccagttca gggcgggcgc ctacgtcgcc ggacggcatc cctggacgtg ggagatcgtc
     1741 gccgggatcc tcgaaggaga tgaatcgccg gaacaactca tccgccgcga ggccgtcgag
     1801 gaagccgccc tcgagattcg cgatgtcatc cccatgcacg ccgtcgtgct gagtccaggc
     1861 gcctgctcgg agacctgcgc cacctacctg ggccgcgtcg acagcgcgaa agccggcggg
     1921 gtctatggct tggaatcgga gggcgagaac atcctggtca aagtcctccc cttcagcgaa
     1981 gcgcgcgcca tgctcgatcg cgacgaaatc ggcaacgccc tcggcgtgat cgccctgcag
     2041 tggctggcgc tgcaccgcga cgaggtgcgt gcccgctggc gttgagcggt tgcgtaaatg
     2101 ccatctccct gtctaccgtc tggccaggga agcgcagggc cagcagagcg agcacaccat
     2161 ggacgtccgg tcgggtttca ttgacagcat cggcaacacg ccgctgatca agctgcgcgc
     2221 cgcgtcggac gcgaccggtt gcaacatcta cggcaaggcc gagttcctca atcccggcgg
     2281 ttcggtgaaa gatcgcgccg cccttgccat catcgaggat gccgagaagc ggggacagct
     2341 ccggcccggg ggcgtgatcg tcgaaggcac ggccggcaac accggcatcg gcatcgcgct
     2401 ggtcgccaac gcacgcggct atcgttcggt gatcgtgatg cccgaaacgc aaagccagga
     2461 aaagaaggac atgctgcgcc tgtgcggcgc cgacctgcga ctggtgccgg ccctgcccta
     2521 cgccaatccc ggcaactatg tgcgctactc cggcacgctc gccgaggagc tcgccgccaa
     2581 ggagccgaac ggcgcgatct gggccaacca gttcgacaat gtcgccaacc gcgacggcca
     2641 ctatcgcacc accggaccgg agatctggga ccagaccaac ggcaaggtcg acggcttcac
     2701 ctgctcggtc ggcaccggcg ggaccctggg cggagtcgcg cgcgcgctca aggagcgcaa
     2761 tcccaacgtc aagattgcgc tcagcgaccc gatgggctcg gcgttctaca actggcacac
     2821 caagggtgaa ctgaaagccg aaggaagctc gatcaccgag ggcattggca acagtcgcgt
     2881 caccgccaac ctcgagggga cgccgatcga catggtctat cagatcacgg acgaggaggc
     2941 cctgcccgtc ttgttcgacc tgatcgagca cgagggcctc gtgctgggcg gttcgacggc
     3001 catcaacatc gtcggagcca ttcggctcgc ccgcgacctc ggtccgggca agaccgtggt
     3061 caccatcctg gccgacggcg gccagcgcta tcagtccaag ctgttcaatc cggctttcct
     3121 gcgcgagaag aatctgccgc tgccgccctg gatgaaatga gccgcccccg atgagtcggg
     3181 tcgtggtctg cggcagcctc aacatggacg tcgtcgtgca gagcgcgcga cgcccggccc
     3241 cgggcgaaac gctgctgggc gccgcggtgt cgtttcttcc cggcggcaag ggcctcaatc
     3301 aggccgtcgc cgccgcccgc ctcggcgcgc cgacggcgat gatcggcgcg gtcggcaacg
     3361 atgcgttcgc caacagcctg cgcggctttc tcgccgacaa cgacgtcgac agttccggcg
     3421 tgcgcgagct cgatggaccc gccaccggcg tcgcgctgat ccaggtcgcc ggcaaggaca
     3481 acgccatcac cgtcgcctcc ggcgccaatc ttcacttcac caaggccatg gtgcggcagg
     3541 cgccgcaacg ccacgaagtg tgggttgccc agttcgagac gcccctcgag gtgacggaag
     3601 ccatcctgaa acgggcgcag tcggcgggtg cgcgcaccgt gctcaatctc gcgccgttcc
     3661 tgccgcatcc cgatcgcttg atgaaggtgg tcgacgtcgc cgtgctgaac gagatcgagc
     3721 ttgcgcaggc cacgcgcacg aagctccagg ccgccagcgc aatgcgggac atcgtcggcg
     3781 cctgccggaa actgcatgcc aaaggcgccc gggccgtggt ggcgacgctc ggtgcacgcg
     3841 gcgccgtcgt ggtgacggcc gaggacgtgg tcacggtgcc ggccctcaag gccaaggtcg
     3901 tcgacacgac cggcgcgggc gactgcttcg tgggcgcact ggccgctcgc atgat
//
LOCUS       DASWGA010000966         9005 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1001933, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000966 DASWGA010000000
VERSION     DASWGA010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9005
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001933"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="VF991_22115"
     CDS             complement(<1..444)
                     /locus_tag="VF991_22115"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX9559203.1"
                     /translation="MAPATLTPSSAADAATPPHSKAAAGLLVGALGVVFGDIGTSPLY
                     ALRESFLHGSGMAPTPEHVLGVLSVLFWAVTLTVTIKYVTLIMRADNKGEGGVLALAT
                     LATHGLNGGGFRIRHAITLLAVVSLALFYGDAIITPAITVMSAIEG"
     gene            579..1796
                     /locus_tag="VF991_22120"
     CDS             579..1796
                     /locus_tag="VF991_22120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX9559204.1"
                     /translation="MAEPASDFGDVSNPRLYREDSWRPHFALMRREDPVHRHEESPYG
                     PYWSVTRYADIMRVELDPATYSSASELGGIQIADQPKGQELPNFIRMDPPRHTAQRKT
                     VAPIVAPSNLANMEATIRRRTQSVLDGLPRGQPFDWVDRVSTELTAMMLATLFDFPWE
                     DRRKLTHWSDVAIANIEAPDAVVKSEAERMAELRRMGETMAALWQERASQPPKFDLIS
                     MMAHAEATQNMPLNEFIGTFGLLIVGGNDTTRNSMTGGLIAVLDNPAELAKVKADAGL
                     LDSLVAEIIRWQTPVIHMRRTATRDAELAGKSIKQGDKVVMWYVSGNRDEAAIEEPER
                     FRVGRPKARQHLAFGAGIHRCVGDRLAEMQLKILWEEILKRDLALEVAGPPVRLYSNF
                     IRGIRSLPVVIRA"
     gene            complement(1783..2151)
                     /locus_tag="VF991_22125"
     CDS             complement(1783..2151)
                     /locus_tag="VF991_22125"
                     /inference="COORDINATES: protein motif:HMM:NF016854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HEX9559205.1"
                     /translation="MKGTWKKSPPGLVATFDAAIAGKPGVVRRQMFSYPCAFLNGNLL
                     SGLFQDQMMVRLSEADRVKAVVKAGAKPFAPGGRPMREYVVLPPGIVADKRKLGVWLK
                     RAVAHVETLPAKAAKKPRRG"
     gene            2276..2902
                     /locus_tag="VF991_22130"
     CDS             2276..2902
                     /locus_tag="VF991_22130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9559206.1"
                     /translation="MKLYYMPGACSIGIHVLLEEIGKPYDLHKIDGAKQEQYGPDFVK
                     LNPKSKVPTLQRDDGSVLTEFPAIATWLARKNPDKGLLPSDPDGEARALEAMDYVVST
                     MHMQGFSRMFRPVNYAPTEADHDKVKARGKEIMEKGLALMDKALEGKEYITGKFSVAD
                     AALFYVEFWASARMKMPLPKNCAAHYERMKNRPAVKRVLEQEGLAAAA"
     gene            3040..3876
                     /locus_tag="VF991_22135"
     CDS             3040..3876
                     /locus_tag="VF991_22135"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9559207.1"
                     /translation="MSAALLYGLVIGSAIAHAVWNALVKSAGDRTLTMVAIRVAGLAL
                     GLMALPFVDWPSSESWKWLGLTAAVQFGYYALLIRSYAAGDMSVVYPLARGLAPVLTT
                     IGAFLAIGETLSTGQIVAVVLISLGIMALSFGAGASRHAVGFALATGVAVATYSFFAG
                     LGVRTAGTVLGFQACLEIVTGLGMVGYALLARRADLLGYARRHGAVGLLAGAVSVLGF
                     LAYLVAARSLPLGPVTALRETSVIFGAVLGTIVLREGFGLRRIGAAVLVMSGIMLLAI
                     LR"
     gene            3891..4856
                     /locus_tag="VF991_22140"
     CDS             3891..4856
                     /locus_tag="VF991_22140"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX9559208.1"
                     /translation="MSLPAALMSRLRLPLIAAPMFLVSGPALVKAACRSGIIGSFPTA
                     NCRTVEELDRWLADMSADLLRAAHETGRAPAPLCPNLIVHRSNPRLPDDLAAVLRHKA
                     EIVITSVGSPEPVLKPLKDAGCLVLADVASVRHAEKAAAAGVDGLVLLTAGAGGQTGW
                     VNPFAFVRAVRTFWDGIVVMAGGMADGQAVAAAQTLGCDLAYMGTKFIATRESLAKES
                     YKQMLVKSRLDDVLLTRAFTGLETNMLRPSIEAAGLDPDDLPVRGAIDIAKDINAAER
                     DKPDAKRWKDIWSAGHSVSGVSDIPSVAELVERTEAEYRSARQGV"
     gene            complement(4861..8040)
                     /locus_tag="VF991_22145"
     CDS             complement(4861..8040)
                     /locus_tag="VF991_22145"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559209.1"
                     /translation="MPQNTPTPALSGPDALKWRCIGPPRGGRVVAVSGDPHDRMTFYF
                     GACAGGIWKTVDGGVFWRCVSDGFMSSAALGAITVAPSDSNVIYAGTGETAIRLDVSY
                     GDGIYKSTDAGRTWSHSGLKQTKFIGRICVHPTNPDLVYVAALGDVFGPNRERGVFRS
                     KDGGKSWEKVLYRSDVAGAVEISMDRNNPRILFAAFWEARRNFWNVSSGGPGSGLFRS
                     RDGGDTWEEVSGKPGFAERPLGKLGVAVSPVRAGRVWALVEAEGDKTGLYRSDDYGER
                     WVLTATNRDLMHRPWYYTHVFADTGHADTVFVTNLQMWKSTDGGTSFAEITTRHGDNH
                     DLWIDPNDPNRMIEGNDGGANISFNGGQSWSTIYNQKTAQFYRLDIDDQYPYRVYGTQ
                     QDNTSIAVPSASEWGVITLADCTYPGTGESGFIAVNPKDHNIVYIGAIGSSPGGSGAL
                     QRYDHRTRQIQLVNVWPEESTGVSPKDLKYRFAWTYPIVFSPHDPDTLYVGGNCVFRT
                     RNEGMDWEKISPDLSLNDRSRQGHSGGDITRESAGAEVHATCACVVESPHRRGEIWAS
                     TDDGLVHVTRDAGKAWKNVTPKALPELAYVGCVEISPHHADTIYLAATRYKLADYKPY
                     LFKSSDGGRSWKSIKGDLPAGEITRVVRADPVRKGLLYIGTETGVFFSLDDGAHWTRM
                     AGGFPVVPVYDLKLKDSDLIAATHGRSFWVLDDVSALRGMADGRKSTRLFTPRTAIRT
                     KLHWSAGANVRGGIAYGPAFGIDGSMLVIDKADGSKGREFLDVGENPPNGAIVYYWLA
                     EDATKPVVLTVRDGAGRRIVAYSSDDKAAPPQRRPDTKRGLNRFVWDLKYPGPTKLDP
                     ALAPPRPKPLVPDPENPSGPAVVPGAYAVDLAVGDKSWSAKFTVAKDPRLGTSAAAYA
                     AQFALHKELIASLSKLNAAVNRLRTMKRQLGELGGNAGKPQRGMKSRAKALVERLSAI
                     ESILVDPKRMSARDVLRHPAGLNDTLLDMIAMTTTADAAPTTQTRAVSQEIMGKIDEQ
                     IAKLDALVARDIAPLNAMLAKARIGHIAA"
     gene            complement(8149..8415)
                     /locus_tag="VF991_22150"
     CDS             complement(8149..8415)
                     /locus_tag="VF991_22150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559210.1"
                     /translation="MDRSFVVQLNDYRITTAEILYWMPDHTHVLQSFVWQNLDLAPQF
                     PNLTRFLDFWQRNLEGKLHRVRVANTRLIKPAEYKFASGFYELH"
     gene            8688..9005
                     /gene="groES"
                     /locus_tag="VF991_22155"
     CDS             8688..9005
                     /gene="groES"
                     /locus_tag="VF991_22155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013850608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEX9559211.1"
                     /translation="MKFRPLHDRVVVKRVEEEGKTKGGIIIPDTAKEKPMEGEIIAVG
                     PGARDEKGTLVPLDVKKGDRILFGKWSGTEIKLDGDDLLIMKESDIMGIIEGPSAAVR
                     KAA"
BASE COUNT         1429 a         2936 c         3100 g         1540 t
ORIGIN      
        1 gccctcgata gcgctcatga ccgtgatcgc cggtgtgatg atggcgtcgc cgtagaacag
       61 cgccaggctg accacggcca ggagcgtgat ggcatggcgg atcctgaagc ctccgccgtt
      121 caatccgtgc gtggccagcg tcgccagggc gagcacgccg ccctcgccct tgttgtcggc
      181 gcgcatgatc agggtgacgt acttgatggt gacggtgagc gtcaccgccc agaacagcac
      241 cgacagcacg cccagcacgt gctcgggcgt cggcgccatg ccgctgccgt gcaggaagga
      301 ttcgcgaagg gcgtagagcg ggctggtgcc gatgtcgccg aacaccacgc ccagcgcgcc
      361 caccagcaag ccggcggcgg ccttgctgtg gggcggagtc gcggcgtcgg cggcggacga
      421 tggtgtaagg gtggcagggg ccatgaggtc gaacgccgcc aaggacggcg gcggcgcgac
      481 ggtttgcgcc cccgctttcc gcctgtcaac gcgccaaatc ggggccagtt gcgacgaaag
      541 ggcttgactt gggcctggcc aaaaggcggc gttggcgcat ggccgagcct gcctccgact
      601 ttggcgatgt cagcaatccg cgcctgtatc gcgaagattc gtggcgcccg cactttgcgc
      661 tgatgcggcg tgaagacccg gtccatcgcc acgaggagag cccctacggg ccctattggt
      721 cggtgacgcg ctacgccgac atcatgcggg tcgagctcga tcctgcgacc tattcgtcgg
      781 cctccgagct cggcggcatc cagatcgccg accagcccaa gggccaggaa cttcccaact
      841 tcatccgcat ggacccgccg cgccataccg cgcagcgcaa gacggtggcg ccgatcgtgg
      901 cgccctccaa cctcgccaac atggaggcga cgatccgccg gcgcacccag tcggtgctcg
      961 acggtctgcc gcgcggccag ccgttcgact gggtcgaccg cgtctcgacc gagctcaccg
     1021 ccatgatgct ggcgacgctg ttcgactttc cctgggagga ccgccgcaag ctcacccatt
     1081 ggtcggacgt cgccatcgcc aacatcgaag cccccgacgc cgtggtgaaa agcgaggccg
     1141 agcgcatggc cgagctcagg cggatgggcg agacgatggc ggcgctgtgg caggagcggg
     1201 cgtcacagcc gcccaaattc gacctgatct cgatgatggc ccacgccgag gcgacccaga
     1261 acatgccgct caacgagttc atcggcacgt tcggtctgct gatcgtgggc ggcaacgaca
     1321 cgacgcgcaa ttcgatgacc ggcgggctga tcgcggtgct cgacaacccc gccgagctcg
     1381 ccaaggtcaa ggccgacgcc ggcctgctcg acagcctggt ggcggaaatc atccgctggc
     1441 agacgccggt gatccacatg cgccgcacgg ccacgcggga cgccgagctt gccggcaagt
     1501 cgatcaagca gggcgacaag gtggtgatgt ggtacgtctc gggcaatcgc gacgaggcgg
     1561 cgatcgagga gcccgaacgc ttcagggtcg gccgacccaa ggcgcgccag catctcgcgt
     1621 tcggcgccgg catccatcgc tgcgtcggcg accggctggc cgagatgcag ctaaaaatcc
     1681 tgtgggagga gatcctgaag cgcgaccttg cgctcgaggt cgccggtccg ccggtgcgac
     1741 tctactccaa cttcatccgc ggcattcgtt cgctgccggt ggtcatccgc gcctaggctt
     1801 tttcgctgcc ttggccggca gcgtctcgac gtgggcgacg gcgcgcttca gccagacgcc
     1861 gagcttcctt ttgtcggcga cgatgcccgg cggcagcacg acatattcgc gcatcggccg
     1921 tccacccggc gcgaacggct tggcgccggc cttgacgacg gccttgacgc gatcggcttc
     1981 ggacagccgc accatcatct ggtcctggaa cagtcccgac agcaggttgc cgttcaggaa
     2041 ggcacaggga tagctgaaca tctgccggcg cacgacgccc ggcttgcccg cgatcgcggc
     2101 atcgaaggtg gcgacgaggc cgggcggcga tttcttccac gtgcctttca tgggccgttc
     2161 ctcaaatgcg gacgtgtcgt ccagcgagcg caggttcgcc cttgctgttt cccgctcgcg
     2221 cgccggatgc tagcgttacc cgtcttgttt ggacatccac ctttgggagg taacgatgaa
     2281 gctctattac atgcccggcg cgtgctcgat cggcatccac gtcctgctcg aggagatcgg
     2341 caagccctat gacctgcaca agatcgacgg cgccaagcag gagcagtacg ggccggactt
     2401 cgtcaagctc aaccccaagt ccaaggtgcc gaccctgcag cgcgacgacg gctcggtgct
     2461 gaccgagttc ccggcgatcg ccacctggct cgcccgcaag aacccggaca agggcctgct
     2521 gccatccgat cccgacggcg aggcgcgcgc gctcgaagcc atggattatg tcgtctcgac
     2581 catgcacatg cagggtttct cgcgcatgtt ccggccggtc aactacgcgc cgaccgaagc
     2641 cgatcacgac aaggtcaagg cgcgcggcaa ggagatcatg gaaaagggcc tggcgctgat
     2701 ggacaaggcg ctggagggca aggagtacat caccggcaag ttctcggtcg ccgatgccgc
     2761 actcttctat gtcgagttct gggcgtcggc ccgcatgaag atgccgctgc ccaagaactg
     2821 cgccgcccac tacgagcgca tgaagaaccg gcccgcggtc aagcgcgtgc tggagcagga
     2881 aggcctcgcc gccgcggcgt aggtcattgg accgcgggcc ggaggcccgc ggtcccctca
     2941 ttcctcctcg cggcttgcac ggggagcggc gtttgcgtgg cggcttgccg gcatcggcgt
     3001 cattgacgct gtcggaaggc cgcccgctaa tcgggcgaca tgtccgcggc gctgctctac
     3061 ggcctcgtca tcgggtcggc gatcgcccac gccgtctgga atgcgctggt gaagtcggcc
     3121 ggcgatcgca cgctcaccat ggtggcgatc cgggtggcgg gcctggcgct cggcctcatg
     3181 gctttgccct tcgtcgactg gccgtcgtcc gagagctgga agtggcttgg cctcaccgcg
     3241 gcggtgcagt tcggctacta cgccttgctg atccgctcct atgccgccgg cgacatgagc
     3301 gtcgtctatc ccctggcgcg cgggctggcg ccggtgctga cgaccatcgg ggccttcctg
     3361 gcgatcggcg agacgctgag cacgggccag atcgtcgccg tcgtcctgat ctcgctcggc
     3421 atcatggcct tgtcgttcgg cgccggtgcg agccgtcacg ccgtgggctt tgcgctggcg
     3481 accggcgtcg ccgtcgccac ctacagcttc ttcgccgggc tcggtgtgcg caccgccggc
     3541 acggtgctgg gcttccaggc ctgtctcgag atcgtcaccg ggctcggcat ggtgggctac
     3601 gccttgctgg cgcgccgcgc cgacctttta ggttatgccc gccgccacgg cgcagtcggt
     3661 ctgctggccg gcgcggtgtc ggtgctgggc ttcctggcct atctggtggc ggccagaagc
     3721 ctgccgctcg gtccggtgac ggccttgcgc gagaccagcg tgatcttcgg cgcggtgctg
     3781 ggcacgatcg tgctcaggga gggcttcggc ctgcgccgga tcggcgcggc ggtgctcgtc
     3841 atgagcggga tcatgcttct cgccatcttg cgctgaggta atctggcgat atgtcgctgc
     3901 ccgccgcgct aatgagccgc ctgcgcctgc cgctgatcgc ggcgccgatg ttcctggtgt
     3961 cggggccggc gctggtgaag gccgcgtgtc gcagcggcat catcggctcg ttcccgaccg
     4021 ccaactgccg caccgtcgag gagctcgacc gctggctggc cgacatgagc gccgatctat
     4081 tgcgcgccgc ccacgaaacg ggccgcgcgc cggcgccgct ttgtcccaac ctgatcgtgc
     4141 atcgctccaa cccgcggctg cccgatgatc tcgccgcggt cctgcgtcac aaggcggaga
     4201 tcgtgatcac gtcggtcggc tcgcccgagc cggtgctgaa gccgctgaag gacgccggct
     4261 gcctggtgct ggccgacgtc gcttcggtgc gccatgccga gaaggcggcg gcggccggcg
     4321 tcgacgggct ggtgctgctg accgccggcg ccggcgggca gaccggctgg gtcaatccct
     4381 tcgccttcgt gcgcgccgtg cggacgttct gggacggcat cgtggtgatg gcgggcggca
     4441 tggccgacgg ccaggcggtg gcggcggcgc aaacgctggg ctgcgacctg gcctacatgg
     4501 gcaccaagtt catcgccacc cgcgagagtc tggccaagga gtcgtataag cagatgctgg
     4561 tgaagagccg gctcgacgac gtgctgctga cccgcgcctt caccgggctc gagaccaaca
     4621 tgctgcgccc ctcgatcgaa gcggcggggc tcgatcccga cgatctgccg gtgcgcggcg
     4681 ccatcgacat cgccaaggac atcaatgccg ccgagcgcga caagccggat gccaaacgct
     4741 ggaaggacat ctggagcgcc gggcattcgg tgtcgggcgt ctccgacatc ccgtcggtcg
     4801 ccgagctggt cgagcgaacc gaagcggaat accgctcggc gcgtcagggc gtctgaacgc
     4861 ctaggcggca atgtggccga tgcgggcctt ggccagcatg gcgttcagcg gggcgatgtc
     4921 gcgggcgacc agcgcgtcga gcttggcgat ctgttcgtcg atcttgccca tgatctcctg
     4981 cgacaccgcc cgggtttgcg tggtcggtgc ggcgtcggcg gtcgtcgtca tggcgatcat
     5041 gtcgagcagc gtgtcgttga gaccggccgg atggcgcagc acgtcgcgcg ccgacatgcg
     5101 cttgggatcg accaggatgc tctcgatggc cgacagccgc tcgacgagcg ccttggcgcg
     5161 gctcttcatg ccgcgttgcg gcttgcccgc gttgccgccg agctcgccaa gctggcgctt
     5221 catcgtgcgc agccggttga ccgccgcgtt gagcttcgag agcgacgcga tcagctcctt
     5281 gtgcaaggcg aactgcgcgg cgtaggcggc ggccgaggtg ccgagccgcg ggtccttggc
     5341 gacggtgaat ttcgccgacc acgacttgtc gccgacggcc agatcgacag cgtaggcgcc
     5401 gggaacgacc gccgggccgg acgggttctc gggatcgggc accaggggct tgggccgcgg
     5461 tggggcgagc gcgggatcga gcttggtcgg tccgggatat tttagatccc agacaaagcg
     5521 gttgagcccg cgcttggtgt ccggccggcg ctgcggtggg gccgccttgt cgtcgctgct
     5581 gtaggccacg atcctgcggc cggcgccgtc gcggacggtg agcacgaccg gcttggtggc
     5641 gtcctcggcg agccagtaat agacgatggc gccgttcggc gggttctcgc cgacgtcgag
     5701 aaactcgcgg cccttcgagc cgtcggcctt gtcgatcacc agcatgctgc cgtcgatgcc
     5761 gaacgcagga ccgtaggcga tgccgccgcg gacgttggcg ccggcgctcc aatgcagctt
     5821 ggtgcggatg gccgtgcgcg gcgtgaacag gcgggtgctc ttgcggccgt cggccatgcc
     5881 gcgcagcgcg ctcacgtcgt cgaggaccca gaacgagcgg ccgtgcgtgg cggctataag
     5941 gtcgctatcc ttgagcttga ggtcgtatac cggcacgacc ggaaagccgc cggccatgcg
     6001 cgtccagtgc gcgccgtcgt cgaggctgaa gaagacgccg gtctcggttc cgatgtagag
     6061 caggcccttg cgcaccggat cggcgcgcac gacgcgggtg atctcgcccg ccggcaggtc
     6121 gcccttgatc gacttccagc tccgcccgcc gtcgctgctc ttgaacaggt acggtttgta
     6181 atcggccagc ttgtagcgcg tcgcggcgag gtagatcgtg tcggcgtggt gcggcgagat
     6241 ctcgacgcag ccgacatagg cgagctccgg tagtgccttg ggcgtcacgt tcttccacgc
     6301 cttgccggcg tcgcgcgtca catgcaccag cccgtcgtcg gtcgaggccc agatctcgcc
     6361 gcgccggtgc ggcgattcga cgacgcaggc gcaggtcgcg tggacttcgg cgccggcgct
     6421 ctcgcgcgtg atgtcgccgc cggaatggcc ctggcgcgag cggtcgttga ggctgaggtc
     6481 gggcgatatc ttctcccagt ccatgccctc gttgcgggtg cggaagacgc agttgccgcc
     6541 gacatagagc gtgtcgggat cgtgcggcga gaacacgatc gggtaggtcc aagcgaagcg
     6601 gtatttgagg tccttgggcg agacgccggt cgattcctcg ggccacacgt tgacgagctg
     6661 gatctgacgc gtgcgatggt cgtagcgctg cagcgcgccg ctgccgcccg gactcgaacc
     6721 aatggcgccg atatagacga tgttgtggtc cttcggattg acggcgatga agccgctctc
     6781 gccggtgccc ggataggtgc agtcggccag cgtgatgacg ccccattcgg aagcgctcgg
     6841 cacggcgatc gaggtgttgt cctgctgcgt gccgtagacg cggtagggat actggtcgtc
     6901 gatgtcgagg cggtagaact gcgcggtctt ctggttgtag atcgtcgacc acgattggcc
     6961 gccgttgaac gagatgttgg cgccgccgtc attgccctcg atcatgcggt tgggatcgtt
     7021 ggggtcgatc cacagatcgt ggttgtcgcc gtgccgcgtc gtgatctcgg cgaagctcgt
     7081 gccgccgtcg gtcgacttcc acatctgcag gttggtgacg aacacggtgt cggcgtggcc
     7141 ggtgtcggcg aagacgtggg tgtaatacca gggccggtgc atcaggtcgc ggttggtcgc
     7201 ggtcagcacc cagcgctcgc cgtaatcgtc ggagcggtag aggccggtct tgtcgccctc
     7261 ggcctcgacc agcgcccaca cgcgaccggc acgcaccggc gatacggcga cgcccagctt
     7321 gccgagcggc cgctcggcga agcccggctt gccggaaacc tcttcccagg tgtcgccgcc
     7381 gtcgcgcgag cggaacaggc cgctgcccgg tccgccgctc gacacgttcc agaagttgcg
     7441 ccgcgcctcc cagaacgccg cgaacaggat gcgcgggttg ttgcggtcca tcgagatctc
     7501 gaccgcgccc gcgacgtcgc tgcgataaag caccttctcc cagctcttgc cgccatcctt
     7561 ggagcggaac acgccacgct cgcggttggg gccgaacacg tcgcccagag cggcgacgta
     7621 gacgaggtcg ggattggtcg ggtgcacgca gatgcggccg atgaacttgg tctgcttgag
     7681 gccgctatga ctccaggtgc ggccggcgtc ggtcgatttg tagatgccgt cgccatagga
     7741 gacgtcgagg cggatcgccg tctcgccggt gccggcgtag atcacgttgg agtcggaggg
     7801 cgccacggtg atcgcgccga gcgccgccga actcatgaag ccgtccgaca cgcaacgcca
     7861 gaacacgccg ccatcgaccg tcttccagat gccgccggcg cacgcgccga aatagaacgt
     7921 catgcggtcg tgcggatcgc ctgacacggc gacgacgcgg ccgccgcgcg gcgggccgat
     7981 gcaacgccat ttcaacgcgt cggggcccga caaggcgggc gtaggtgtgt tctggggcat
     8041 gaagggggcg ccgatctcca acgtgaaagc cggcgcgacc gtaagtcagg gatgcgcggc
     8101 aaggcaaccg cgcccctgtg cgtcatccgc ctgtgcagac ccttgtggtc agtgcagctc
     8161 gtagaagccg ctggcgaact tgtactcggc cggcttgatc aaccgggtgt tggccacccg
     8221 cacccgatgc agcttgccct cgagattgcg ctgccagaaa tcgaggaagc gggtgaggtt
     8281 gggaaattgg ggggccagat ccaggttttg ccagacgaag ctttgaagaa cgtgcgtgtg
     8341 atcgggcatc cagtagagga tttcggcggt cgtgatgcgg tagtcattga gttgcacaac
     8401 aaaactacga tccatcgagc actccttgac acaacactct caaaggaata atcacgcacc
     8461 ttcaacgaaa aaccaataaa attcttttca catcaatggg ttatcagcac tctctcgcga
     8521 ttgctgccag tgcgaagtga ctttgttccc gcaccttgac tcgcgctgcc cataccccta
     8581 aatcccgtgc gccgttggca ctctccctag gagagtgctg atagcaatcc attcatcgcg
     8641 gccagccggc cgcggaggct caaccaggga tcattggagg aagaaccatg aagttccgtc
     8701 cgcttcacga ccgcgtcgtg gtcaagcgtg tcgaggaaga aggcaagacc aagggcggca
     8761 tcatcattcc cgacaccgcc aaggaaaagc cgatggaagg cgagatcatc gccgtcggcc
     8821 cgggcgcccg ggacgaaaag ggcacgctcg ttccgctcga cgtcaagaag ggcgaccgca
     8881 tcctgttcgg caagtggtcc ggcaccgaga tcaagctcga tggtgacgat ctcctgatca
     8941 tgaaggagtc cgacatcatg gggatcatcg aaggtcccag cgccgcggtc cgcaaggccg
     9001 cctga
//
LOCUS       DASWGA010000967         2387 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1130061, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000967 DASWGA010000000
VERSION     DASWGA010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1130061"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1068
                     /locus_tag="VF991_22160"
     CDS             <1..1068
                     /locus_tag="VF991_22160"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559212.1"
                     /translation="RIAKTPGSEQVKEIIGSGPYKFRADLHEPGVKIVLEKFADYKPR
                     SEPSNWASGGKVARLDRVEMLGIPDAQTQVSALIRGEVDYLERVPADLLPLIDAKSGA
                     KAEVVSKFGFQAIMRMNHLQPPFDNLKVRQAIARAVDRSMYAAVVAGDPSFATDCAAI
                     FGCGMPYESKDGIPARDVAAARAMLKEAGVDMSKPIVMLHVANAPGIAALGNVTRQLL
                     VDLGFQVDMQAMDFQTFATRRLNTKPVSEGGWNIAHTTNTVPDQGNPLSNPFLVALGP
                     PASAWGWPTDPKTEALRLKFATASDAAYRKAVAAEIQARAYEQVLYLPLAQFTTPSAW
                     RNNLVGVLKSPAMLLYNIDKK"
     gene            1077..2144
                     /gene="add"
                     /locus_tag="VF991_22165"
     CDS             1077..2144
                     /gene="add"
                     /locus_tag="VF991_22165"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004000 - adenosine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0043101 - purine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HEX9559213.1"
                     /translation="MAKAVADDYLRRIPKAELHCHLAGTLRATTVAELAQRAGLALPR
                     PADKLYQWPDFYGFLDVLRLTALVLRTPEDFARAVYEYVEDAVRDGNLRHVEFFFNPD
                     YFYPNGIDYPAMVDGMIAGIAAAEKTFGVSSLLICSIDRSTNTPAQAVEIVETAIAHR
                     RDHVVGIGLDGAERAGPPATFAEAYALAHKAGLHRTAHCCEDNQTLVEAPPTNYLICR
                     DVLGCDRIDHGYNMLASDWVMAEARRDGLYFTPCAWTSLVHNRPHRPQRIRRMVEAGL
                     NVTINTDDPAMFETNLGHGFTTLFESIGWGPDMARKFSLNSVEGSWLSESDKGALRIA
                     FRRELAALDKQFGYEAAAPAV"
     gene            complement(2224..>2387)
                     /locus_tag="VF991_22170"
     CDS             complement(2224..>2387)
                     /locus_tag="VF991_22170"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
                     /protein_id="HEX9559214.1"
                     /translation="NHMGAITTEILDAPAFYYAEHYHQQYLAKNPGGYCGLGGTGVSC
                     PIGLGVAAE"
BASE COUNT          412 a          827 c          770 g          378 t
ORIGIN      
        1 cgcatcgcca agacgccggg cagcgagcag gtgaaggaga tcatcggctc cggtccctac
       61 aagtttcgcg ccgacctgca cgagccgggc gtaaagatcg ttctggagaa gtttgccgac
      121 tacaagccgc gcagcgagcc gtccaattgg gcctccggcg gcaaggtcgc caggctcgac
      181 cgggtcgaga tgctgggcat acccgacgcg cagacccagg tgagcgcgct gatccgcggt
      241 gaagtcgact atctcgagcg ggtgccggcc gatctgctgc cgctgatcga cgcaaagtcg
      301 ggcgccaagg cggaggtggt gagcaagttc ggcttccagg cgatcatgcg catgaatcac
      361 ctgcagccgc cgttcgacaa tctcaaggtg cgccaggcca tcgcccgggc ggtcgaccgc
      421 tcgatgtacg ccgccgtggt ggcgggcgac ccgagcttcg ccacggattg cgccgccatc
      481 ttcggctgcg gcatgccgta cgagagcaag gacggcattc cggcgcgcga cgtggccgcc
      541 gccagggcga tgctgaagga ggcgggtgtc gatatgtcca agccgatcgt gatgctgcac
      601 gtcgccaacg cgccgggcat cgctgcgctg ggcaacgtca cccgccagct tctggtcgat
      661 ctcggtttcc aggtcgacat gcaggcgatg gatttccaga ccttcgccac gcgccggctc
      721 aataccaagc cggtgagcga aggcggctgg aacatcgccc acacgaccaa caccgtgccc
      781 gatcagggca atccgctcag caacccgttc ctcgtggcac tgggtccgcc cgcctcggcc
      841 tggggctggc cgaccgatcc caagaccgag gcgttgcgcc tgaagttcgc caccgcctcc
      901 gacgccgcct accgcaaggc cgttgctgcc gaaatccagg cgcgggccta cgagcaggtg
      961 ctttacctgc cgctggcgca gttcacgacg ccgtcggcgt ggcgcaacaa cctggtgggt
     1021 gtgctgaagt cgccggcgat gctgctctac aacatcgaca agaagtgaga ccggcgatgg
     1081 ccaaggcggt tgccgacgac tatctcaggc gcattcccaa ggccgagctg cattgccacc
     1141 tggctggcac cctgcgcgcc accacggtgg ccgagctcgc ccagcgcgcc gggctcgccc
     1201 tgccgcggcc ggccgacaag ctctatcagt ggcccgactt ctacggcttc ctcgacgtgt
     1261 tgcgcctgac ggcgctggtg ctgcgcacgc ccgaagactt tgcgcgcgcc gtctatgagt
     1321 atgtcgagga cgcggtgcgc gacggcaatc tcaggcacgt cgagttcttc ttcaacccgg
     1381 actacttcta tcccaacggc atcgactatc ctgcgatggt cgacggcatg atcgcaggca
     1441 tcgcggcagc cgagaagacg ttcggcgtat cgagcctgtt gatctgctcc atcgaccgat
     1501 cgaccaacac gccggcgcag gccgtcgaga tcgtcgagac ggcgatcgcg caccgccgcg
     1561 accatgtggt cggcatcggc ctcgacggcg ccgagcgcgc cgggccgccg gcgaccttcg
     1621 ccgaggccta tgcgctggcc cacaaggccg gcttgcatcg caccgcgcat tgctgcgagg
     1681 acaaccagac cctggtcgag gcgccgccca ccaactacct gatctgccgc gacgtgctgg
     1741 gatgcgaccg catcgaccac ggctacaaca tgctggcgtc ggattgggtc atggccgagg
     1801 cgcggcgcga cggcctgtat ttcacgccct gcgcctggac cagcctggtg cacaaccggc
     1861 cgcaccggcc gcagcgcatc cggcgcatgg tcgaagccgg cctcaacgtc accatcaaca
     1921 ccgacgatcc ggcgatgttc gaaaccaacc tcggccacgg cttcacgacc ctgttcgagt
     1981 cgatcggatg ggggcccgac atggcccgca aattcagcct gaactcggtc gagggctcct
     2041 ggctttccga aagcgacaag ggcgcactca ggatagcgtt ccgccgcgag ctcgccgccc
     2101 tcgacaagca gttcggatac gaggccgccg cgccggcagt ctaagctggg ggcgcgcgac
     2161 tccagtcgcg cgtcttccgt cggatgatga agatcgcgcc actggagtgg cgcgccccag
     2221 caactattcc gccgcgaccc ccagcccgat cgggcagctg acgcccgtgc cgcccagccc
     2281 gcagtagccg ccgggattct tggcgaggta ctgctggtga tagtgctcgg cgtaatagaa
     2341 cgccggagcg tccaggatct ccgtcgtgat cgcgcccatg tggttct
//
LOCUS       DASWGA010000968         1751 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_482752, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000968 DASWGA010000000
VERSION     DASWGA010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_482752"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /gene="msrA"
                     /locus_tag="VF991_22175"
     CDS             <1..409
                     /gene="msrA"
                     /locus_tag="VF991_22175"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX9559215.1"
                     /translation="EEVSSGRTGHYEALQVEYDPARVTYQRLLEVFWRNIDPLDTDGQ
                     FCDKGRQYRSAIFVAGDEQRALAEASKAALETSGKLPGRIMTEILPATAFYPAEAEHQ
                     DYYRKNPVRYAYYRWTCGRDRRLEQLWGAPPTQ"
     gene            complement(411..1148)
                     /locus_tag="VF991_22180"
     CDS             complement(411..1148)
                     /locus_tag="VF991_22180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003520994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX9559216.1"
                     /translation="MEDLLALAATPQAWAALATLVVMEVVLGIDNLIFISILTNKLPE
                     HQRSRARRVGIGLAVILRLGLLASVAIIAQLTQPLFSLFDHGFSWRDLILIAGGLFLI
                     WKATSEIHDNVAGETEPEPTPAGVAGMTMAGAIGQILLLDLVFSLDSIITAVGMTDDI
                     PIMVLAVLIAVGLMLMAADPLARFIGNNPTIVMLALGFLLMIGGSLLAEGMGVHVPKG
                     YIYAAMAFSALIEGLNMLARRRRKRPR"
     gene            complement(1162..>1751)
                     /locus_tag="VF991_22185"
     CDS             complement(1162..>1751)
                     /locus_tag="VF991_22185"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9559217.1"
                     /translation="PHTPMEETMYSLDQLVRSGKVRYIGGSTMPAYKFAQMVMIADWK
                     GYARPIAMQNLYNLIQREEEREMNRLCHEQGVGLIPYSPLARGFLAANRSKEGGGATE
                     RSKNDVQVQAGTYRDCDWEIAERLKKVAVGKNASPAQAALAWLLSKPYMGSPIIGATN
                     LDQLTSAAQSTEIALTSDESKMLEEPYQFRVSPMN"
BASE COUNT          311 a          549 c          586 g          305 t
ORIGIN      
        1 cgaggaagta tcgagtggac gcaccggcca ctacgaggct ctgcaggtcg agtacgaccc
       61 ggcacgcgtg acgtatcaac ggctgctcga ggtgttctgg cgcaacatcg atcccctgga
      121 tacagacggt cagttctgcg acaagggacg gcaatatcgc tcggccattt tcgtcgccgg
      181 cgacgagcaa cgtgcgctgg cggaagcctc gaaggcagcg ctcgagacgt cgggcaagct
      241 tcccggacgc atcatgaccg agatcctgcc ggcaaccgcg ttctatccgg ccgaggctga
      301 gcaccaggac tattaccgga agaatccggt gcgttacgcc tattatcgct ggacctgcgg
      361 ccgcgaccgg cggctcgaac agctttgggg cgcgccaccg actcagtgag tcagcgcggc
      421 ctcttcctcc ggcgacgcgc cagcatgttc agcccctcga tcagggcgga gaaggccatg
      481 gcggcgtaga tgtagccctt gggcacgtgc acgcccatgc cttcggccag cagcgagccg
      541 ccgatcatca gcaggaagcc cagcgccagc atgacgatgg tcggattgtt gccgatgaag
      601 cgcgccagcg gatcggccgc catcagcatc aggccgaccg cgatcagcac ggccagtacc
      661 atgatcggga tgtcgtcggt catgccgacg gcggtgatga tgctgtcgag cgagaacacc
      721 aggtcgagca gcaggatctg gccgatggcg cccgccatgg tcatgccggc gacgcctgcg
      781 ggcgtcggct cgggctcggt ctcgcccgcg acattgtcgt ggatctcgct cgtggccttc
      841 cagatcagga acaggccgcc cgcgatcagg atcaggtcgc gccaggagaa gccgtggtcg
      901 aacaggctga acagcggttg ggtgagctgg gcgatgatcg ccacgctggc caaaagtccc
      961 agccgcagga tcaccgcgag cccgatgccg acgcggcgcg cccgcgagcg ctgatgctcc
     1021 ggcagcttgt tggtcaggat ggaaatgaag atcaggttgt cgatgccgag caccacctcc
     1081 atcaccacca atgtggcgag cgccgcccag gcttgagggg tggccgcaag agcgagcagg
     1141 tcttccatca gcccactgtg ctcaattcat cggcgaaacg cggaactgat acggctcctc
     1201 gagcatcttc gattcgtcgg acgtgagcgc gatctccgtc gattgagccg cggacgtgag
     1261 ctggtcgagg ttggtggcgc cgatgatggg cgagcccatg tagggcttgc tgagcagcca
     1321 ggcgagtgcc gcttgggcgg gcgatgcgtt cttgccaacg gcgaccttct tcagccgctc
     1381 ggcgatctcc cagtcgcaat cgcgataggt gccggcctgg acctgcacgt cgttcttgga
     1441 gcgctcggtg gcgccgccgc cttccttgct gcgattggcg gcgaggaagc cgcgcgccag
     1501 cggcgagtac gggatcaaac cgacgccctg ctcgtggcac aggcgattca tctcgcgctc
     1561 ttcttcgcgc tggatcaggt tgtagaggtt ctgcatcgca atcggccgcg catagccttt
     1621 ccagtcggcg atcatgacca tctgggcgaa cttgtaggcc ggcatggtcg agccgccgat
     1681 gtaacggacc ttgcccgagc gcacgagctg gtcgagcgag tacatggtct cttccatcgg
     1741 cgtgtgcggg t
//
LOCUS       DASWGA010000969         4254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1511665, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000969 DASWGA010000000
VERSION     DASWGA010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4254
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1511665"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1283
                     /locus_tag="VF991_22190"
     CDS             <1..1283
                     /locus_tag="VF991_22190"
                     /inference="COORDINATES: protein motif:HMM:NF019011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M81 family metallopeptidase"
                     /protein_id="HEX9559218.1"
                     /translation="SGLVTKAAYEQMTTAIVEAIKKGCDAVLLALHGAMVAEHYDDGE
                     GELLNRIRKIAPDVPIAVALDFHTQMTDAMVKGATIITGYRTYPHIDMADTARRAGRT
                     LMRALAGEVEPKMVWGNRPIMSSSLVHTPSREPMKTLMGMANQAEDSGHVLNASVFGG
                     FPQADIPHLALSSVIVCDKRTAEGEVVLNKILDTAWEKREGFLFHPEPLSVQVARAKS
                     LNGGPVVMADHGDNTASGGTQDVMSVIEEAMKQGLDDACAGPICDPACVAKMVEAGVG
                     AEVTLDLGGKVDMPAMGLKGKPLKVTGKVKAITDGQFIVTGPMATGTMVRMGRTAVLD
                     TGKMQIVVSEKRAEPFDLGVFTHCGIDPRRKTYVLIKSRQHFRAGFEPIAKHIVMCDG
                     DGCTASDLKLFKYSRVKRPLYPFDLDMRLGRNDA"
     gene            1430..2890
                     /locus_tag="VF991_22195"
     CDS             1430..2890
                     /locus_tag="VF991_22195"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047420 - N-acyl-D-amino-acid deacylase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HEX9559219.1"
                     /translation="MAAYDVVIRNGQVADGTGRKLFAADVALRGDRIAAVEAPGTLSS
                     DNEIDAKGKVVAPGFIDVHTHDDTALIDNPTMAMKASQGVTTVICGNCGVSASPYLRS
                     DIGHFLSLIVKKPENVSRSFAEFAGKVDAAKPAINGAFLIGHGTLRMNAMGDDLGRSA
                     TAAEIGVMRDLLDQSLEQGAIGMSSGLFYAVANAASTDEVAEIAKPLGKWGGVYTAHM
                     RDEGDDILKAMDETFEIGRRAGASIIVSHHKCSGRSNFGRMKETLPKFSEAMKSQDIA
                     FDVYPYVAGSTILRSDMLERADKVLITWSDKVPGVSGRDLKEIAQEMGCSMREAADRL
                     QPAGAIYFMMDEKDVQSAMAHPGAMIGSDGIPFDTHPHPRLWGTFPRVLGHYSRELKL
                     FPLEDAVRRMTSYSAQRFKLARRGELKPGFYADICVFDPATVIDTATFDKPISAAKGI
                     DTVLCNGEIVWRDGKPGGGRKGRVLMRQDMQAEAKV"
     gene            complement(3044..3469)
                     /gene="dksA"
                     /locus_tag="VF991_22200"
     CDS             complement(3044..3469)
                     /gene="dksA"
                     /locus_tag="VF991_22200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEX9559220.1"
                     /translation="MSITLPQNYRPTEREPFMNPMQQEYFRQKLLKWKGELIEESNQT
                     LQNMQEESLAQPDLADRATAETDRSLELRTRDRFRKLISKIDQALKSIEEGTYGYCEE
                     TGEPISLKRLEARPIATLSVEAQERHERLERTRRDEGAD"
     gene            complement(3670..>4254)
                     /locus_tag="VF991_22205"
     CDS             complement(3670..>4254)
                     /locus_tag="VF991_22205"
                     /inference="COORDINATES: protein motif:HMM:NF021364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding domain-containing protein"
                     /protein_id="HEX9559221.1"
                     /translation="QALVGADFFRRLARDFVTLSLPAQPVLAEYGAGLPAFIAGYEPA
                     GGLPYLIDIARLDWALNLAFHAPEARRLAAADLSAIAAERLPSMSLALSAGAALLHSC
                     YPLDRIWQASQPGAAGETVDLNSGGADLLILRRAHDAAFVSLSAGEAALISSLVEDKS
                     LEVAAGAALQVEPAFDLSVSFARLLGLGAFAALQ"
BASE COUNT          786 a         1404 c         1386 g          678 t
ORIGIN      
        1 cctcgggtct cgtgaccaag gccgcctacg agcagatgac gacggcgatc gtcgaggcga
       61 tcaaaaaggg ctgcgacgcc gtcctgctcg ccctgcatgg cgccatggtc gccgaacact
      121 acgacgacgg tgaaggcgag cttttaaatc gcatccgcaa gatcgcgccc gacgtgccga
      181 tcgccgtggc gctcgacttc cacacccaga tgaccgacgc catggtcaag ggcgccacca
      241 tcatcaccgg ctaccgtacc tatccgcaca tcgacatggc cgacacggcg cgccgtgccg
      301 gccgcacctt gatgcgcgcg ctggcgggcg aggtcgagcc gaagatggtg tggggcaacc
      361 ggccgatcat gagcagctcg ctggtccaca cgccgtcgcg cgagccgatg aagacgctga
      421 tgggcatggc caaccaggcc gaggattcgg gccacgtgct gaacgcctcg gtgttcggtg
      481 gcttcccgca ggccgacatc ccgcacctcg cactttcctc ggtgatcgtc tgcgacaagc
      541 gcacggccga aggcgaggtc gtgttgaaca agatcctcga tacggcgtgg gagaagcgcg
      601 agggctttct gttccatccc gagccgctgt ccgtccaggt ggcgcgcgcc aagtcgctga
      661 acggcggtcc cgtggtcatg gctgaccatg gcgacaacac cgcgtcgggc ggcacgcagg
      721 acgtgatgag cgtgatcgag gaggcgatga agcagggcct cgacgatgcc tgcgccgggc
      781 cgatctgcga tccggcctgc gttgcgaaga tggtcgaggc cggcgtcggc gccgaggtga
      841 ccttggacct gggcggcaag gtcgacatgc cggctatggg gctgaagggc aagccgctca
      901 aggtcacggg caaggtcaag gccatcaccg acggacagtt catcgtcacc gggccgatgg
      961 ccaccggcac catggtgcgc atgggccgca ccgccgtgct cgacaccggc aagatgcaga
     1021 tcgtggtgtc ggagaagcgc gccgagccct tcgacctcgg cgtgttcacc cattgcggca
     1081 tcgacccgcg ccgcaagacg tacgtgctga tcaagtcgcg ccagcatttc cgcgccggct
     1141 tcgagccgat cgccaagcac atcgtcatgt gcgacggcga cggctgcacg gcgtcggacc
     1201 tgaaactgtt caaatattcc agggtcaagc ggccgcttta cccgttcgac ctcgacatgc
     1261 ggctcggccg caacgacgcg tagacgtccg gccgctatgt taagaaaacg ctgtcatccc
     1321 gaggccgaag gccgaggccc ctttccggat cagtaaaggt ccctcgctgc gctcgggatg
     1381 acagcagggc tgatcaacgc gctatcgaat tcgctctagg agtaccacca tggctgctta
     1441 cgacgtcgtc atccgcaatg gccaggtcgc cgacggcacg ggcaggaagc tgttcgccgc
     1501 cgacgtcgcg ctcaggggcg atcgcatcgc cgccgtcgag gcgccgggca cgctgagcag
     1561 cgacaacgag atcgatgcca agggcaaggt ggtcgcgccg ggcttcatcg acgtgcatac
     1621 ccacgacgac accgcgctga tcgacaatcc gaccatggcg atgaaggcga gccagggcgt
     1681 gaccacggtg atctgcggca attgcggcgt ttcggcctcg ccgtacctgc gctccgacat
     1741 cggccatttc ctctcgctga tcgtcaagaa gccggagaac gtctccagaa gcttcgcgga
     1801 gttcgccggc aaggtcgatg cggccaagcc cgccatcaac ggcgccttcc tgatcggcca
     1861 cggcacgctg cgcatgaacg ccatgggcga cgaccttggc cgtagcgcga cggcggccga
     1921 gatcggcgtg atgcgcgacc tgctcgacca gagcctcgaa caaggcgcca tcggcatgtc
     1981 gagcgggctc ttctatgccg tcgccaacgc cgcctcgacc gacgaagtgg ccgagatcgc
     2041 caagccgctc ggcaagtggg gcggcgtcta caccgcgcac atgcgcgacg agggcgacga
     2101 catcctgaag gcgatggacg aaaccttcga gatcggccgg cgcgccggcg cctcgatcat
     2161 cgtctcgcat cacaaatgct cgggccgttc caatttcggc cgcatgaagg aaaccctgcc
     2221 caagttcagc gaggcgatga aaagccagga catcgccttc gacgtctatc cctacgtcgc
     2281 cggctcgacg atcctgcgca gcgacatgct cgagcgcgcc gacaaggtgc tgatcacctg
     2341 gtccgacaag gtgccgggcg tgagcggccg cgacctcaag gagatcgccc aggagatggg
     2401 ctgctcgatg cgcgaggccg ccgaccgcct gcagccggcc ggcgccatct acttcatgat
     2461 ggacgagaag gacgtgcaaa gcgccatggc gcaccccggc gcgatgatcg gctcggacgg
     2521 cattcccttc gacacccacc cgcatccgcg cctgtggggc accttcccgc gcgtgctcgg
     2581 ccactattcg cgcgagctga agctcttccc gctggaagac gcggtgcggc gcatgacgtc
     2641 gtactcggcg cagcgcttca agctcgcccg gcgcggcgag ctcaagcccg gcttctatgc
     2701 cgacatctgc gtgttcgacc cggcgacggt gatcgacacc gcgacgttcg acaagccgat
     2761 ctcagccgcc aagggcatcg acacggtgct atgcaacggc gagatcgtgt ggcgcgacgg
     2821 caagcccggc ggcggccgca agggccgtgt gctcatgcgc caggacatgc aggccgaggc
     2881 gaaggtctaa gtcttagctg ggagcgcgcc actccagtgg cgctcatgtc atgctctttt
     2941 ggaccgcgag cctccggctc gctcggactc atgagcgagc cggaggctcg cggtccggaa
     3001 gactatgagc gccactggag tggcgcgctc ccagcaatga gcgtcagtcc gcgccttcgt
     3061 cgcgtcgggt gcgttcaagc cgctcgtggc gctcctgcgc ctcgaccgac agggtggcga
     3121 tcggccgggc ttcgaggcgc ttcagcgaga tcggctcgcc ggtctcctcg cagtatccgt
     3181 aggtgccctc ttcgatcgac ttcagcgcct ggtcgatctt ggagatcagc ttgcggaagc
     3241 gatcgcgggt gcgcagttcg agagagcggt cggtctcggc ggtggcacga tcggcgagat
     3301 cgggctgcgc caagctctcc tcctgcatgt tctgcaacgt ctgattggac tcttcgatca
     3361 gttcgccctt ccacttcagc agcttctgcc ggaaatactc ctgctgcatc gggttcatga
     3421 aaggctcgcg ttccgtcggc cggtaattct gcggcaacgt aatcgacatc gtcggcaact
     3481 ccactcgcag caactacatg tccgccttgg ggggcaggcg gctcttgaag cgcgcggagt
     3541 atagggatgg ccgatgacgc cgcaacatcg ttcacgctcg aaggccgact cttgtcgtgc
     3601 agtgcagcaa acggccgatc gaagaatttg cctaaaccac gcgcaattac ggcatcggca
     3661 aggctagcct tattgcagcg cagcaaaagc gcctaaaccc aacaaccgcg cgaaagagac
     3721 gctcagatcg aatgcgggct cgacctgcag ggccgctcct gcggcgacct ccaaggactt
     3781 gtcctcaact aaggacgaga tgagggccgc ttcccctgca ctcaggctga cgaacgccgc
     3841 gtcgtgggcg cgtcgcaata tcagaagatc ggcgccccct gaattcagat cgactgtctc
     3901 gcctgcggcc ccgggctggc tggcctgcca gatgcgatca aggggatagc acgagtggag
     3961 caacgctgcg cctgccgaca gcgccagcga catcgacggc aggcgttcgg cggcaatggc
     4021 ggaaaggtcc gcggccgcca gccggcgggc ttccggggca tggaaggcca ggttcaaggc
     4081 ccagtccagc cgcgcgatgt ctatcagata cggcagaccg ccggccggtt cgtagccggc
     4141 gatgaaggcc ggcaagccgg cgccgtattc ggccaacacc ggctgcgccg gcagcgacag
     4201 ggtgacgaaa tcgcgtgcga gacggcggaa gaagtccgct cccaccagcg cctg
//
LOCUS       DASWGA010000970         2128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1002309, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000970 DASWGA010000000
VERSION     DASWGA010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002309"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..259)
                     /locus_tag="VF991_22210"
     CDS             complement(<1..259)
                     /locus_tag="VF991_22210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9559222.1"
                     /translation="MKHSCPVTAFQKLINGKYKLRIVWDLQDGPRRYSEIRNGLLRGA
                     EGSREIAPRVLSRELKALVLSGLIDRKDYGVVPPRVEYRLTR"
     gene            369..680
                     /locus_tag="VF991_22215"
     CDS             369..680
                     /locus_tag="VF991_22215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559223.1"
                     /translation="MKQFLIKYRFSKGTKEEWHRDIAEFIANLDSDPVLKGRISYRCM
                     KNAKDSDYYHLARAADEQAPKDLQQRDWFKRYTEKTRLVAGGEVEVLPLEIIAETATP
                     A"
     gene            complement(690..1967)
                     /locus_tag="VF991_22220"
     CDS             complement(690..1967)
                     /locus_tag="VF991_22220"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEX9559224.1"
                     /translation="MPRPDDIWLAAGVRTPFAKVDGALAAFDAIELSVPVARHMVDRL
                     KGGKPDFAVWGVVVPSLTFSNIAREVLMDAGIDATVPAFSTVMACSTSMMGAIEAAGM
                     IDGDSYNLALVGGVDSLSRIQIGLGQRLSDWLRKFQQARSLGQKIDQVTHVQLKDIRL
                     FIPAIVNRTTGLSMGEHTEITAKEWQIGRQEQDEIALESHQHAVAGWDKGFFDDLVIP
                     LGGVTRDTIPRQDTSLEKLARLPPSFDRTSGKGSLTAGNSSPLTDGAAAIWVASSKGL
                     ERLSATTPRVKLVDWEIGSVDFRVEGLLMAPAFAIPRLLARHDLSYADIHLWEIHEAF
                     AAQVAFHLKALQNADFLRDKAKVPRDFGVFPTERMNPNGGSTAIGHPFGATGARIISQ
                     AVKELAAMPRGRRAIVSICADGGQGSVLLLEAA"
BASE COUNT          362 a          690 c          701 g          375 t
ORIGIN      
        1 tgcgcgtcag gcgatactcg accctgggcg gtacgacgcc ataatccttg cggtcgatca
       61 agcccgacag tacgagcgcc ttcaattcgc ggctgagaac gcgcggcgcg atctcgcggc
      121 tgccctcggc gccacgtaac aggccgttcc tgatctcgct gtagcggcgc gggccgtcct
      181 gcaggtccca cacgatccgc agcttgtatt tgccattgat tagtttttgg aaggccgtga
      241 ccgggcagct gtgcttcatg gtcgtgctcc gcgttccggg cctacagtat catttttgtc
      301 catacttgcg cgaatgctcc ttaagccgcc aaatgacagg caccgaggat cgaccgcagg
      361 agcgcgcgat gaagcagttt ctcatcaagt accggttcag caaggggacg aaggaggaat
      421 ggcaccgcga catcgccgaa ttcattgcca atctcgacag cgatcccgtc ctgaaaggcc
      481 ggatttccta tcgctgcatg aagaacgcca aggattccga ctactatcat cttgcccgcg
      541 ccgccgacga gcaggcgccc aaggacctcc agcagcgcga ctggttcaag cgctacacgg
      601 aaaagacccg gctcgtggcc ggcggcgagg tcgaggtgct gccgctcgag atcatcgccg
      661 agaccgccac gccggcgtga cggcaacgat caggcggcct cgagcagcag gacactgccc
      721 tggccgccgt cggcgcagat gctgacgatg gcgcgccggc ccctcggcat ggccgcgagc
      781 tccttcaccg cctggctgat gatgcgggcg ccggtggcgc cgaagggatg gccgatcgcc
      841 gtgctgccgc cgttggggtt catgcgctcg gtcggaaaga cgccgaaatc gcgcggcacc
      901 ttggccttgt cgcgcaggaa gtcggcgttc tgaagcgcct tcaggtgaaa ggccacctgc
      961 gcggcgaagg cctcgtggat ctcccagaga tggatgtcgg catagctgag atcgtggcgt
     1021 gccagcagcc gcgggatggc gaaggccggc gccatcaaga gaccctcgac gcggaaatcg
     1081 accgagccga tctcccaatc aaccaatttt acacgcggcg tcgtggcgga aagccgctcg
     1141 agccctttcg acgaggcgac ccagatggcc gccgcgccgt cggtgagcgg cgaggagttg
     1201 ccggccgtca ggctgccctt gccgctggtg cggtcgaacg acggcggcag gcgcgcgagc
     1261 ttttccagcg aggtgtcctg gcgcgggatg gtgtcgcgcg tcacgccgcc cagcgggatc
     1321 acgagatcgt cgaagaagcc cttgtcccag ccagccaccg catgctggtg gctttcaagc
     1381 gcgatctcgt cctgctcctg ccggccgatc tgccattcct tggcggtgat ctcggtgtgc
     1441 tcgcccatgc tgaggcccgt cgtgcgattg acgatcgccg ggatgaagag cctgatgtcc
     1501 ttgagctgga cgtgcgtcac ctggtcgatc ttctggccga gcgagcgggc ctgctggaac
     1561 ttgcgcagcc agtccgacag gcgctgtccc aggccgatct ggatgcggct caaactgtct
     1621 acgccgccca ccagggcgag attataggag tcgccgtcga tcatgccggc ggcctcgatg
     1681 gcgcccatca tgctggtcga gcaggccatg acggtagaga acgccggcac cgtggcgtcg
     1741 atgccggcgt ccatcagcac ttcgcgggcg atattgctga aggtcaggct gggtacgacg
     1801 acgccccaca ccgcgaagtc gggcttgccg cccttgagcc ggtcgaccat gtggcgcgcc
     1861 accggcaccg acagctcgat ggcgtcgaag gccgccagcg cgccgtcgac cttggcgaac
     1921 ggcgtgcgca cccctgcggc aagccagatg tcgtcgggtc gcggcatctc tagtggctta
     1981 tcatgcgtag ggctcgatcg gcgtcgtcgc gaagtcgccg aggacctctt ctatcgcgcc
     2041 catggttacg ccgcctgctc aagcgttgag gcgacgtcgc gtgtggtgac gcgcctgata
     2101 tcacggatcc tcgtcgtgtc gaacggcc
//
LOCUS       DASWGA010000971        10516 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_754395, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000971 DASWGA010000000
VERSION     DASWGA010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10516
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_754395"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..694)
                     /locus_tag="VF991_22225"
     CDS             complement(<1..694)
                     /locus_tag="VF991_22225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011976109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9559225.1"
                     /translation="MRVLGISAFYHDSAAALIEDGQLVGAAQEERFTRKKHDSGFPQN
                     AVQFCLDTAGIKLGDVDYVAFYDKPFLKFERLLETYLAYAPRGFNSFRMAMPLWLKEK
                     LFQKTLLSDEMKRWQPDFDWQKRLLFGEHHQSHAASAFFPSPYEEAAVLCMDGVGEWA
                     TTSLGWGQGNKLEMLKELHFPHSLGLLYSAFTYYTGFKVNSGEYKVMGLAPYGEPKFK
                     DTILTNIVDLKED"
     gene            complement(712..864)
                     /locus_tag="VF991_22230"
     CDS             complement(712..864)
                     /locus_tag="VF991_22230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5989 family protein"
                     /protein_id="HEX9559226.1"
                     /translation="MGSVIVELWAFMRERKKFWLLPILIMMVIFGGLIVLTKGSAIAP
                     FIYTLF"
     gene            complement(882..1313)
                     /locus_tag="VF991_22235"
     CDS             complement(882..1313)
                     /locus_tag="VF991_22235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SxtJ family membrane protein"
                     /protein_id="HEX9559227.1"
                     /translation="MATSQLHEDFSREEHVKAGTDRGFGLVFAGAFALISALSWWRDH
                     TGWHWTLPVAVAFLVVAYTFPKALSPLNKLWLKFGLLLYKVMNPLILGLLFFITITPI
                     GLVMRLFGKDFLRLRMDRQAKSYWIDRTPPGPPPQSMRNQF"
     gene            complement(1405..2088)
                     /locus_tag="VF991_22240"
     CDS             complement(1405..2088)
                     /locus_tag="VF991_22240"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9559228.1"
                     /translation="MSEAAVLPRGSAVAHSNEARGEAHMGQTGRTDGRNRRAAETRRK
                     IIAAAKAMISETSTAPTVVAVAKRADVSVRSVFQHFGDVESLFVTVVDSVRGDLVVLP
                     PTPTNRPLPNRIASVVDNLAHAFDRIVPLRVAAGQFANHPALIERGLTSKNELRQATF
                     EVFAPEFALLSEAAREELADAIGAAMSLDAWIVLRRRDGMSFERATAVWRRTLTALLA
                     YGSVVPAAE"
     gene            2208..2873
                     /locus_tag="VF991_22245"
     CDS             2208..2873
                     /locus_tag="VF991_22245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX9559229.1"
                     /translation="MNTSLAKNPLAVLWDFGGVILSSPFEAFNRYEGEAGLPRDFIRS
                     LNARNPDSNAWAKMERSEVSLDGFVTLFEEEARQQGYTLDGWRILQALSGDIRPQMVE
                     ALRRCKAAFRVACITNNMKSGEGPGMARSPEKAQAVAEIMALFEHVVESSKLGLRKPD
                     PLIYQHACDLLGVPPERCVYLDDLGINLKPARALGMRTIKVGDPDAAIDELQAMVGIP
                     LRG"
     gene            2877..4424
                     /locus_tag="VF991_22250"
     CDS             2877..4424
                     /locus_tag="VF991_22250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX9559230.1"
                     /translation="MSWQPEIDDLRRREELAHRMGGPDKIKRQHDGGKLTVRERIERL
                     LDPGSFHEIGAIAGKAQYDEAGNLTDFMASNFVMGRGRIDGRTVSVGGDDFTVRGGAA
                     DASIWEKQMLSEQMAGELGIPMVRLVDGTGGGGSVKTYETSGFTYVPRNPAWEHVVNN
                     LAKVPVVALGLGSVAGLGSARLVTSHYSLMVKGISQMFVAGPPVVARLGEKVTKEELG
                     GTDIHARNGAVDDEVESEDEAFARTRRFLSYLPSSIEGLSERTPTNDDAGRREASLLD
                     TVPRDRRKVYRIRPIVEACVDRGSFFEIGKMWGRSVVTGLARLDGWPVAVLASDPFFY
                     GGGWTADASHKVIRFVDFAETFHLPVVHFVDIPGFVIGVTAEKAATIRHGARALAAIY
                     QSKAPWCSILMRKSFGVAGAAHQNWQKYNFRYAWPSGDWGSLPLEGGIEAAYKAELAA
                     SPDPAAHLAAIEARLNKVRSPFRTAERFGVEEIIDPRDTRPLLCEFANLAAPMRKPGP
                     RSFGYRP"
     gene            4436..4990
                     /locus_tag="VF991_22255"
     CDS             4436..4990
                     /locus_tag="VF991_22255"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecX family transcriptional regulator"
                     /protein_id="HEX9559231.1"
                     /translation="MKRTARPITAKYLQNAAMFYLERYPSTAEGLRRILNRRVRKARM
                     LDAPVMDNVGQAIDAIVAKFVDSGVVDDKAFAQTKARALHRRGTSTRLTRQKLKLAGI
                     DGDTLDKAMAGLDEELHTDPARREWRGAVALARRRRLGPFRPAKDRKDTRARDLAAMA
                     RAGFDYDVAKKVIDAPTPDALDDA"
     gene            5012..5362
                     /gene="arsC"
                     /locus_tag="VF991_22260"
     CDS             5012..5362
                     /gene="arsC"
                     /locus_tag="VF991_22260"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00014.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HEX9559232.1"
                     /translation="MTITIWRNPRCSKSRQTLELLRNRGIEPAIREYLKQPPDKADVE
                     SLMDLVGGDARDLIRDGEPEFKQFGRKKAELSRAEVARAIAAHPVLLQRPIVVAGKRA
                     AIGRPPEAVLPVVK"
     gene            5367..7034
                     /locus_tag="VF991_22265"
     CDS             5367..7034
                     /locus_tag="VF991_22265"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9559233.1"
                     /translation="MVGRLRLWSGYILFFYVVTHLLNHALGLISLRVLEVGRLGFVFL
                     WHNPIGQTVLYGALFSHFLLALWSLYRRRALKLSHWEWTQWILGALIVPLGALHVVGT
                     RLAHELYGVDPGYPWVLGSLITSDWTSIARQFLLPLVVWLHACIGLHFAWRLKSWYRT
                     SLPALYAVALLVPVAGIVGAAIALRDVADLAQQPGFLENLFARVHAPPPADVANLYAI
                     SRNLQISALVLLVGVLGARRLRDLWERRLGVVRLDYDERRSVAEPAGLSILEMSRIAG
                     IPHASVCGGRGRCSTCRVRIGGPDRTRLPPPSAEEQKVLARVGVPANVRLACQLRPPP
                     GHYRITPLLPATAGPVEAYRRQPQAHGGERYVAILFADIRGFTSISEGKLPYDVVFLL
                     NRYFRATGQAIEAAGGRVDKFIGDGVMAIFGLDSEPRVACRQALDAARRMAEALDDLN
                     EALSGDLDQPLRIGIGLHSGPTIVGEMGYERATQLTAIGDTVNIASRLESLTKDFAVE
                     LVVSQELLDRADIDLAAYQSHDVEIRGRQERLAVRAIKKARELTAMS"
     gene            7094..7579
                     /locus_tag="VF991_22270"
     CDS             7094..7579
                     /locus_tag="VF991_22270"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9559234.1"
                     /translation="MRSTLFAMMAVLSLGFSAGALAAGGGADPQPAAQTKPVDPNFAQ
                     AKAMIEARNYKGALPLLQQVVAKDPRNADAYNLMGYATRSSGDPNGSLQYYQQALAID
                     ARHIGAHEYIGEAYLMLNRPADAQQHLARLDSLCVFGCTEYRMLKTAIANYNAGKRPT
                     N"
     gene            complement(7576..8406)
                     /locus_tag="VF991_22275"
     CDS             complement(7576..8406)
                     /locus_tag="VF991_22275"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX9559235.1"
                     /translation="MGYKTILVHCDTGRGTAARLKVALDLADRFDAHVIGLHVRQAFQ
                     APAFTDAGPAMDSLYRSYETAVKADEAIAAGVFRETVGKGYSSEWRVADGYVDQILVA
                     QARYADLVVVGQAEPDSPAVSTPSNLAETVTMAGERPVLIVPHIGVAKPPGKTAMLCW
                     NDSREATRAATAALPLLKAAEKTIVLVVDPKSGVGRDEAGADVAQWLARHGVNVTVQR
                     DTAGDSDVGGVILSRAADHDVDLIVMGIYGHSRMREWVLGGASRTLLASMTAPLLVTH
                     "
     gene            8574..>10516
                     /locus_tag="VF991_22280"
     CDS             8574..>10516
                     /locus_tag="VF991_22280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006330005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HEX9559236.1"
                     /translation="MSTPVPLVFGDYALEDRYRLDKGRVYLTGIQALVRLPMMQRQRD
                     LAAGLNTGGFISGYRGSPLGMYDHALWTAKRYLKENNIHFQPGLNEDLAATAVWGTQQ
                     VNLFPGATVDGVFSIWYGKGPGVDRSMDVLKHGNAAGSSPHGGVLVLAGDDHGCQSST
                     LPHQSEQVFAAAMIPVVNPANVQEYLDFGMLGFALSRYSGCWIGFKAISETVESGASV
                     WVDPERIRIAMPTDFQLPPGGLGIRNPDPPLDAEKRLHGPKMAAVKAFVRANGFDKMV
                     IDPPHARIGIMTTGKAYLDTRQALEDLGIDEARARALGIRVYKVGMTWPLEPEGAQRF
                     AAGLQEVIVIEEKRSNLEDQLVRLLYNLPADRRPLVIGKTDESGRIILPSEGELTPTG
                     VAMVIAARLMKHGGESPELRQRLARLESKEKLLAAPPAKVARTPFFCSGCPHNTSTRV
                     PEGSRAMAGIGCHGMAIWMPERRTALISHMGGEGVGWIGQAPFSADKHIFQNLGDGTY
                     YHSGLMAIRQAAAAGVNITYKILFNDAVATTGGQPHDGPLNVPDITKQVAAEGAKKVV
                     VVTDEPDKYPLNADFAPGVTVRHRDELDAVQRELREIPGLTVLVYDQTCAAEKRRRRK
                     RGTFPDPAKRVFINDAVCEGCGD"
BASE COUNT         1793 a         3546 c         3444 g         1733 t
ORIGIN      
        1 cgtcttcctt gaggtcgacg atgttggtga ggatcgtgtc cttgaacttg ggttcgccat
       61 agggcgccaa ccccatgacc ttgtactcgc cggaattgac cttgaagccc gtgtagtagg
      121 tgaaggccga gtaaagcagc cccagcgagt gcgggaagtg cagctccttc agcatctcga
      181 gcttgttgcc ctggccccag ccgagcgacg tcgtggccca ttcgccgacg ccgtccatgc
      241 acagcacggc ggcctcctcg tagggcgagg ggaagaaggc cgaggcggcg tggctctggt
      301 ggtgctcgcc gaacagcagg cgcttctgcc agtcgaagtc gggctgccag cgcttcatct
      361 cgtcgctcag cagcgtcttc tggaagagct tttccttcag ccacagcggc atggccatgc
      421 ggaacgagtt gaagccgcgc ggcgcgtagg cgaggtaggt ctcgagcagg cgctcgaact
      481 tcaggaacgg cttgtcgtag aaggcgacat agtcgacgtc gcccagcttg atgccggccg
      541 tgtcgaggca gaactggacg gcgttctgcg gaaagcccga atcgtgcttc ttgcgggtga
      601 agcgttcctc ctgcgcggcg ccgacgagct ggccgtcctc gatcagcgcc gcggcgctgt
      661 catggtagaa agccgaaatg ccgagcacgc gcatggcggc gatccgatgt tttagaacag
      721 cgtgtagatg aacggcgcga tcgccgagcc cttggtcagc acgatcaggc cgccgaagat
      781 caccatcatg atcaggatcg gcaacagcca gaacttcttg cgctcccgca tgaaggccca
      841 gagttcgacg ataacagatc ccattgccgg tcctttcggt atcagaattg gttgcgcatg
      901 gattggggcg gcggccccgg cggagtgcgg tcgatccagt agctcttggc ctgccgatcc
      961 atcctgagcc gcaggaagtc cttgccgaac aggcgcatga cgagcccgat cggtgtgatg
     1021 gtaatgaaaa acagcagccc caggatgagc gggttcatca ccttgtagag cagcagcccg
     1081 aacttcaacc aaagcttgtt gagtgggctc aacgccttgg ggaaagtata ggccacgacc
     1141 aggaaggcca ccgccaccgg cagggtccaa tgccagccgg tgtggtcacg ccaccacgac
     1201 agcgcgctga tgagggcgaa ggcgccggcg aagaccaggc caaagccgcg gtcggtgccg
     1261 gctttgacat gctcttcgcg cgaaaagtcc tcgtgaagct ggctggtcgc catttgccga
     1321 aaggtgcctg gtcagaaagc cgtcttttgc gggcccttaa ctcactgatc ccaaacgcca
     1381 agtcaattgc cgacccgttg aaagctattc cgccgcgggg acaaccgaac cataggccag
     1441 aagcgccgtc agggtgcgcc gccagaccgc cgtcgcgcgt tcgaagctca tgccgtcgcg
     1501 acggcgcagc acgatccagg cgtcgagaga catcgccgcg ccgatggcgt cggccaactc
     1561 ctcgcgcgcg gcttcgctga gcagcgcgaa ttccggcgcg aacacctcga aagtggcctg
     1621 ccgcaactcg ttcttcgacg tcaggccgcg ctcgatcagg gccggatggt tggcgaactg
     1681 gccggcggcg acgcgcagcg gcacgatcct gtcgaaagcg tgggccagat tgtcgacgac
     1741 cgaggcgatc cggttcggca gcggccggtt ggtcggggtc ggcggcagga caacgaggtc
     1801 gccccggacg ctgtccacga cagttacaaa aagtgactca acatcaccga aatgctggaa
     1861 aacggatcgg accgagacgt cggcccgctt ggccacggcg accaccgtgg gggcggtact
     1921 ggtctcgctg atcatcgcct tggcggcggc aatgatcttg cggcgggttt ccgctgcgcg
     1981 tcggttgcgt ccgtcagtgc gacctgtctg gcccatatgc gcctcgccgc gtgcctcgtt
     2041 tgagtgtgcc actgcgctgc cgcgcggcag taccgctgct tcgctcattt ccgtattcct
     2101 aagccggagt aacgacgaac ggtggccaat ggccgacccg tcgcctatgg agagcgtcaa
     2161 ataagggccg actgcggcag gaacaaggta aagaccgtcg cacctccatg aatacgagcc
     2221 ttgcaaaaaa ccccctcgcc gtcctgtggg atttcggcgg ggtcattctc agcagcccct
     2281 tcgaggcttt taaccgctac gaaggcgagg ccggcctgcc cagggacttc atccgcagcc
     2341 tcaatgcgcg caatcccgac agcaatgcgt gggcgaaaat ggaacgcagc gaggtttcgc
     2401 tcgacggctt cgtcaccctg ttcgaggaag aagcgcgcca gcagggctac acgctcgacg
     2461 gctggcgcat cctgcaggcg ctgagcggcg acattcggcc gcagatggtc gaggcgctgc
     2521 gccgctgcaa ggcggcgttc cgggtggcct gcatcaccaa caacatgaag tcgggcgaag
     2581 gcccgggcat ggcgcgcagc ccggagaagg cgcaagccgt cgccgagatc atggccctgt
     2641 ttgagcacgt cgtggaatcg agcaagctcg gcctgcgcaa gcccgacccg ctcatctacc
     2701 agcacgcctg cgaccttttg ggcgtgccgc ccgagcgctg cgtctatctc gacgacctcg
     2761 gcatcaacct gaagccggcg cgcgcgctcg gcatgcgcac cataaaggtc ggcgatcccg
     2821 acgccgcgat cgacgagctg caagcgatgg tgggaattcc tttgcgaggc tgagcgatga
     2881 gctggcaacc cgagatcgac gacctgcgcc gccgcgaaga gctggcgcac cgcatgggcg
     2941 gccccgacaa gatcaagcgc cagcatgacg gcggcaagct caccgtgcgc gagcgtatcg
     3001 agcgcctgct cgatcccggc tcgttccacg agatcggcgc catcgccggc aaggcgcagt
     3061 acgacgaggc cggcaacctc accgacttca tggcatccaa cttcgtcatg ggccgcggcc
     3121 gcatcgacgg ccgcaccgtg tcggtgggcg gcgacgactt caccgtgcgc ggcggcgccg
     3181 ccgacgcctc gatctgggaa aagcagatgc tgtcggaaca gatggcgggc gaactcggta
     3241 tcccgatggt gcgcctggtc gacggcaccg gcggcggcgg ctcggtgaag acctacgaga
     3301 cgtcgggttt cacctacgtg ccgcgcaatc cggcgtggga gcacgtcgtt aacaatctcg
     3361 ccaaagtgcc ggtggtggcg ctcggcctgg gctcggtcgc cggtttgggc tcggcgcgcc
     3421 tggtcacctc gcactattcg ctgatggtga agggcatctc gcagatgttc gtggccggcc
     3481 cgccggtggt ggcgcggctc ggcgagaagg tcaccaagga ggagctgggc ggcaccgaca
     3541 tccatgccag gaacggcgcg gtcgacgacg aggtcgagag cgaagacgaa gcctttgccc
     3601 gcacgcgccg gtttctctcc tacctgccgt cctcgatcga gggcttgagc gagcgcacgc
     3661 cgaccaacga cgatgccggc cgccgcgaag cgtccctgct cgatacagtg ccgcgcgatc
     3721 ggcgcaaggt ctatcgcatc cggccgatcg tcgaagcctg cgtcgaccgc ggctcgttct
     3781 tcgagatcgg caagatgtgg ggccgttcgg tcgtcaccgg cctggcgcgg ctcgacggct
     3841 ggccggtcgc cgtgctggcg agcgatccct tcttctatgg cggcggctgg acggccgacg
     3901 ccagccacaa ggtcatccgc ttcgtcgact tcgccgaaac cttccatttg ccggtggtgc
     3961 atttcgtcga catcccgggc ttcgtgatcg gcgtcacggc tgagaaggcc gccaccatcc
     4021 gccatggcgc gcgggcactg gcggcgatct atcaatcgaa ggcgccgtgg tgctcgatct
     4081 tgatgcgcaa gtcgttcggc gtggcgggcg cggcgcacca gaactggcag aagtacaact
     4141 tccgctatgc ctggccgtcg ggcgattggg gttcgctgcc gctggagggc ggcatcgagg
     4201 ccgcctacaa ggctgagctg gcggcgtcgc ccgatccggc ggcccacctc gccgccatcg
     4261 aggcgcggct gaacaaggtg cgctcgccct tccgcaccgc cgagcgcttc ggcgtcgagg
     4321 agatcatcga tccgcgcgac acacgcccgc tgctgtgcga gttcgccaac cttgccgcgc
     4381 ccatgcgcaa gcccggaccg cgcagcttcg gctaccgacc gtaaagagag cgtccgtgaa
     4441 acgcacggcg cgtccgatca ccgccaaata tctgcagaac gccgccatgt tctacctcga
     4501 acgctatccc agcaccgccg aagggctgcg gcggatcctc aaccggcgag tgcgcaaagc
     4561 tcggatgctc gacgcgccgg tgatggacaa cgtcggacag gcgatcgacg ccatcgtcgc
     4621 caaattcgtc gattcaggcg tggtcgacga caaggctttc gcccagacca aggcgcgcgc
     4681 gctccatcgc cgcggcacgt cgaccaggct cactcggcag aagctcaagc tcgccggcat
     4741 cgacggcgat acgctcgaca aggcgatggc cggactggac gaggaactgc acaccgatcc
     4801 cgcgcgacgc gaatggcggg gggcggtggc gctggcgcgg cggcgccgcc tcgggccctt
     4861 tcggccggcc aaggaccgca aggacacgcg ggcccgcgat ctggcggcga tggcgcgcgc
     4921 cggcttcgac tacgacgttg ccaaaaaggt gatcgacgca ccgacgcccg atgcactgga
     4981 cgatgcctga cggcaaagcc atggttcgcc gatgaccatc acgatctggc gcaacccgcg
     5041 ctgcagcaaa tcccggcaga cgctcgagct gctgcgcaat cgaggaatag aacccgcgat
     5101 ccgggagtat ctcaagcagc cgcccgacaa ggccgacgtg gaaagtctga tggacctggt
     5161 gggcggcgat gcgagggatc tgattcgcga tggcgaacct gagttcaagc agttcggcag
     5221 gaagaaggcc gagctttccc gcgccgaggt cgcccgggcg atcgccgctc atccggtcct
     5281 gctgcagcgg cccatcgtcg tggcgggcaa gcgcgcggcg atcggccggc cgcccgaagc
     5341 ggtgctgccg gttgtgaaat agcgccatgg tcgggcggct ccgtctctgg tcgggctaca
     5401 tcctcttctt ctatgtcgtc acgcacctgc tcaatcacgc gctcggcctg atctcgctgc
     5461 gcgtgctcga agttggccgg ctgggattcg tcttcctctg gcacaatccg atcggacaga
     5521 ccgttctcta cggcgcgctg ttcagccatt tcttgttggc gctgtggtcg ctctaccggc
     5581 gccgcgcgct aaaactctcg cactgggaat ggacgcagtg gatcctgggc gcgttgatcg
     5641 tgccgctggg cgcgctgcat gtcgtgggca cgcgcctggc gcatgagctc tatggcgtcg
     5701 acccgggcta tccctgggtg ctgggatcgc tgatcacaag cgactggacc tcgatcgccc
     5761 gccagttctt gctgcccctc gtcgtctggc tgcatgcctg catcggcctg cacttcgcgt
     5821 ggcgcctgaa atcctggtac cgcacctcgc tgccggcgct ctatgcggtc gcgctgctcg
     5881 tgcccgtcgc cggcatcgtc ggcgcggcca tcgccctgcg cgacgtcgcc gatctcgccc
     5941 agcagccggg cttcctcgag aacctgttcg cccgcgtgca tgccccgccg ccggccgacg
     6001 tcgccaacct ctatgcgatt tcgcgcaacc tgcagatcag cgcgttggtg ttgcttgtcg
     6061 gcgtcctcgg cgcgcgccgg ctgcgcgatc tctgggaacg acggctcggc gtcgtgcgcc
     6121 tggactacga cgaacgccgc agcgtggccg agccggcggg cctttcgatc ctcgagatga
     6181 gccgcatcgc cggcattccg catgcctcgg tgtgcggcgg ccgcggtcgc tgctcgacct
     6241 gcagggttcg catcggcggt cccgatcgca ccaggttgcc gccgccttcg gcggaagaac
     6301 agaaggtgct ggcgagggtc ggcgtaccgg ccaatgtgcg gttggcctgc cagctgcggc
     6361 cgccgcccgg ccactaccgc atcacgccgc tcttgccggc gacggccggc ccggtcgagg
     6421 cctatcgccg ccagccgcag gctcatggcg gcgagcgcta tgtcgcgatc ctgttcgccg
     6481 atatccgcgg cttcacctcg atctcggagg gcaagctgcc ctacgacgtg gtgttcctgc
     6541 tcaaccgtta tttccgcgcc accgggcagg ccatcgaggc ggccggcgga cgcgtcgata
     6601 aattcatcgg cgatggcgtg atggcgatct tcggactgga cagcgagccg cgggtggcct
     6661 gccggcaggc gctcgatgct gcccggcgca tggccgaggc gctcgatgac ctcaacgagg
     6721 cgctgtcggg cgacctcgat cagcccctgc gcatcggcat cggcctgcat tcgggtccga
     6781 cgatcgtcgg cgagatgggc tatgagcggg cgacccagct caccgccatc ggcgacaccg
     6841 tcaatatcgc cagtcgcctg gagtcgctga ccaaggattt cgccgtcgaa ctggtcgttt
     6901 cacaggaact gctcgaccgt gcggacatcg atcttgcggc ctaccagagc catgacgtcg
     6961 aaatccgcgg ccggcaggag cggctggcgg tgcgcgcgat caagaaagcg cgcgaactca
     7021 cggcaatgtc ataagaattt cgttgctcag aacaagccgc gagcaacaat gcccgcgaca
     7081 tcaggaggtg accatgcgct cgaccctttt tgccatgatg gccgtgctgt ctctgggttt
     7141 ttcggccggc gcgttggcgg ccggcggcgg cgccgatccc cagcccgccg cgcagaccaa
     7201 gccggtcgac cccaacttcg cgcaagccaa ggcgatgatc gaagccagga actacaaggg
     7261 cgccttgccg ctcctgcagc aggtggtcgc caaagatccc cgcaatgccg acgcctataa
     7321 cctgatgggt tatgcgacgc gcagttccgg cgaccccaac ggctcgctgc agtactacca
     7381 gcaggcgctc gccatcgatg cccggcatat cggggcgcac gaatatatcg gcgaggccta
     7441 tctgatgctc aaccggccgg ccgatgccca gcagcacctg gcgcggctcg attcgctctg
     7501 cgtgttcggc tgcaccgagt accgcatgct caagaccgcg atcgccaact acaacgcggg
     7561 caagcggccg acgaactagt gcgtgacgag cagcggcgcc gtcatgctgg ccagcagcgt
     7621 gcggctggcc ccacccagca cccattcacg catgcgcgaa tggccgtaga tccccatcac
     7681 gatcagatcg acgtcgtgat cggcggcgcg tgacaggatc acgccgccga cgtcggagtc
     7741 gccggccgtg tcgcgctgca ccgtcacgtt cacgccatga cgggcgagcc actgggcgac
     7801 atcggctccc gcttcgtcac gaccgacccc actcttggga tcgacgacca ggacgatggt
     7861 cttttcggca gccttgagca gcggcaacgc cgcggtggcc gcccgcgtgg cctcgcggct
     7921 gtcgttccag cacagcatcg ccgtcttgcc cggcggcttt gcaacgccga tatgcggcac
     7981 gatcagcacc ggacgttcgc ccgccatcgt gacagtttcc gccaggttgg atggtgtgga
     8041 gactgccgga gagtccggct cggcttggcc gaccacgacc aagtcggcgt agcgcgcctg
     8101 tgctaccagg atttggtcga catagccgtc ggccacgcgc cattcgctgg aatatccctt
     8161 gccgactgtt tccctgaaaa cgcccgcggc gatcgcctcg tcggccttca ccgcggtctc
     8221 gtaagacctg tagagactgt ccatcgccgg gccggcatcg gtgaaggccg gcgcctggaa
     8281 cgcctgccgc acatgcaagc cgatcacatg ggcgtcgaaa cgatccgcca gatcgagagc
     8341 gaccttcagg cgtgcggccg tcccgcggcc ggtgtcgcaa tgcaccagga tggtcttgta
     8401 gcccatggcg cccctcctcg gatggtccaa cgtacaacgg gacacggcat ggggggatgc
     8461 ggaattggct cccgtgcgct gcgtgcatgg cgtttcccct gacggccggg gccgctatgc
     8521 tcacccgcgg ataaacgccc gttcacgccg ccgtcttcag aggccttttc gcgatgagca
     8581 cgcccgttcc cctggttttc ggtgattacg cgctggaaga ccgctatcgg ctcgacaagg
     8641 gccgcgtcta tctgaccggc atccaggctc tggtgcgcct gcccatgatg cagcgccagc
     8701 gcgacctcgc cgccggcctc aacaccggcg gcttcatctc cgggtatcgc ggctcgccgc
     8761 ttggcatgta cgaccacgcg ctgtggacgg cgaaacgcta cctcaaggaa aacaacatcc
     8821 atttccagcc cggcctgaac gaggacctcg ccgccaccgc ggtgtggggc acccagcagg
     8881 tcaacctgtt ccccggcgcc accgtcgatg gcgtgttctc gatctggtac ggcaagggcc
     8941 ccggcgtcga ccgctcgatg gacgtgctga agcacggcaa tgccgccggc agctcgccgc
     9001 atggcggcgt gctcgtgctg gcgggcgacg atcatggctg ccagtcctcg accctgccgc
     9061 atcagagcga gcaggtgttc gccgccgcga tgatcccggt ggtcaatccg gccaacgtcc
     9121 aggagtatct cgacttcggc atgctgggct tcgcgctgtc gcgctattcg ggctgctgga
     9181 tcggcttcaa ggcgatctcc gagacggtgg aatcgggcgc ctcggtgtgg gtcgaccccg
     9241 agcgcatccg catcgcgatg ccgaccgatt tccagctgcc gccgggcggg ctcggcatcc
     9301 gcaatcccga tccgccgctc gacgcggaga agcgcctgca cggaccgaag atggcggcgg
     9361 tgaaggcctt cgtgcgcgcc aacggcttcg acaagatggt gatcgatccg cctcacgcgc
     9421 gcatcggcat catgacgacg ggcaaggcct atctcgacac ccgccaggcg ctggaggatc
     9481 tcggcatcga cgaggcgcgc gcccgcgccc tcggcatccg cgtctacaag gtcggcatga
     9541 cctggccgct cgagccggaa ggcgcgcagc gcttcgccgc cggcctccag gaagtgatcg
     9601 tcatcgagga gaagcgctcc aacctcgagg accagctcgt ccgcctgctc tacaacctgc
     9661 cggccgaccg ccggccgctg gtcatcggca agaccgacga gagcggccgc atcatcctgc
     9721 cgagcgaagg cgagctgacg ccgaccggcg tcgccatggt gatcgcggct cggctgatga
     9781 agcatggcgg cgaatcgccg gagctgcgcc agcgtctcgc ccgcctcgag agcaaggaaa
     9841 agctgttggc cgcgccgccg gccaaggtgg cgcgcacgcc attcttctgt tcgggctgcc
     9901 cgcacaacac atcgacgcgc gtcccggaag gtagccgggc gatggcgggc atcggctgcc
     9961 acggcatggc gatctggatg cccgagcgcc gcacggcgct gatcagccac atgggcggcg
    10021 aaggcgtcgg ctggatcggc caggcgccgt tcagcgccga caagcacatc ttccagaatc
    10081 tcggcgacgg cacctattac cattccggcc tgatggcgat ccgccaggcc gccgccgccg
    10141 gcgtcaacat cacctacaag atcctgttca acgatgccgt cgccacgacc ggcggccagc
    10201 cgcatgacgg cccgctgaac gttcccgaca tcaccaagca ggtcgcggcc gagggcgcca
    10261 agaaggtcgt ggtggtcacc gacgagccgg acaagtatcc gctgaacgcc gacttcgcgc
    10321 ctggcgtcac cgtccgccat cgcgacgagc tcgatgccgt gcagcgcgag ctgcgcgaga
    10381 tcccgggcct caccgtgctg gtctacgacc agacctgcgc ggccgagaag cgccgccggc
    10441 gcaagcgcgg caccttcccc gatcccgcca agcgcgtgtt catcaacgac gccgtttgcg
    10501 agggctgcgg cgactg
//
LOCUS       DASWGA010000972         7633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1512070, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000972 DASWGA010000000
VERSION     DASWGA010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7633
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512070"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VF991_22285"
     CDS             complement(<1..669)
                     /locus_tag="VF991_22285"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9559237.1"
                     /translation="MQTTVAANPWLAAVEPSPIGETRRWVLGRTFPADRPLIDLSQAV
                     PGYPPALELRRHLGELLLDPTMHGYTPTLGLPALREDYAAHLGRFYGAAITAGEVGIT
                     SGCNQAFCLALMSLARAGDQVILPRPHYFNHDMWIRMQGIEPVALDFRPGSGAVPDPE
                     DAEKLIGPKTRAIVLISPNNPTGAVYPPATIHAFFELAKKHKIALLLDETYKDFLPEG
                     ERPHE"
     gene            924..2264
                     /locus_tag="VF991_22290"
     CDS             924..2264
                     /locus_tag="VF991_22290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9559238.1"
                     /translation="MVSRKVSRRRFVAATAAASTAFVAAPFVRGAYAAGKLNVGFWDH
                     WVPGANAATETLIKEWADKEKVEVQVDFITSQGNKLLLTIAAESQAKSGHDILAMATF
                     LPARYSEQLTPMNDVVEQLIKDNGKVNATVEYLGKVGGKWLAVPATVGSQMKGPCSRI
                     DLMKDLAGIDIQAMYPAGAPPKADGWTLDTFLKAAEACQKGGKPFGIGLGTTSDSVDT
                     IGAVFHSFGAVLVDAKGEIVLKNDQVRQALDYYKKLIAFLPPDVPSWDDSSNNKWLIA
                     GQGALIMNPPSAWAVAKRDAPKVAEQCWTHGFPAGPKGRFGPFLPFFWGTWSFSKNQS
                     AAKSLLAYLSQASSAEKMVVASGGYDLPSFEKLTTFKTWAEEGPPKGTLYHYPNPHNH
                     QILSIAAAPAPHKIAEQIYTQGIMTQMAVRYYRGEAMDKTLDWAAKEIEGFMRN"
     gene            2370..3299
                     /locus_tag="VF991_22295"
     CDS             2370..3299
                     /locus_tag="VF991_22295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9559239.1"
                     /translation="MADIAARGPVAITTGGRSSLHKLMQRKSTIAFLMALPLILLITL
                     LVAYPAGYAVYLATLNKGMTRFVGLGNFDFLFGRDTFWMVVYQSCLFAITAVIFKAII
                     GFVVAHFVHNIPSKGQRKWRGMLLVPWVIPPAMSTLAWLWLFDPSYSAFNWIFEHIGL
                     DHIAWLGETGWARFSVILVNVWIGAPFFMIMYLAALKSVPEQLYEAASIDGATWWQRI
                     WYVTLPMMRNIIAITALFSLIVTFANFDIVRVLTKGDPLNTTHIFGTWAFRVGIESGD
                     IPLGATVSLFMVPILAVAATFILRDITKRGSEV"
     gene            3299..4216
                     /locus_tag="VF991_22300"
     CDS             3299..4216
                     /locus_tag="VF991_22300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9559240.1"
                     /translation="MADAAIAARTASTRSRTGYGSISRDRRWALRWSYFFLVLFAIFF
                     LLPPLYMLITSLKSSAEISAATNPWWVYSPTLSNYIELLTQNQYLTFFRNSAIVSVFV
                     VAITMSISVIAAFALARMRFWGSATLATGVFLTYLVPETLLFIPLFKMFAWVNETFDI
                     QLMNHWWTLMILYPTLTVPFATWIMIGYFASIPKELDEAALIDGASWMQTLTKIFIPV
                     ALPGIIAATIFTFTVAWAQFLYPLAFTTSTTELVLPVGIVTTLIKGDVFNWGQIMTGA
                     LLGAAPPLIIYAFLMDYYIAGLTAGATKG"
     gene            4225..5325
                     /gene="ugpC"
                     /locus_tag="VF991_22305"
     CDS             4225..5325
                     /gene="ugpC"
                     /locus_tag="VF991_22305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX9559241.1"
                     /translation="MAQVTLRKVIKKYDEVLAVRGIDLDITDKEFIVLVGPSGCGKST
                     TLRMIAGLEEISDGDIAIGGHVVNDVPPKDRDIAMVFQNYALYPHMNVYENMSFGLKL
                     KRTPKDEIDRRVKQAAQILDITELLDRKPKQLSGGQRQRVAMGRAIVRDPKVFLFDEP
                     LSNLDAKLRVQMRTEIKKVHQKVRTTTVYVTHDQVEAMTLADRVVVMNAGLIEQVGSP
                     NDLYHSPATKFVAGFIGSPAMNFIPCHLEQAAGALRVRLSDTLAFPVPADRTARYTSH
                     VGKANLILGLRPEHIIETRPHVEPNQHDFENVIDVVEPMGMETLVYFTIVGAEICGRV
                     NPNAGATAGKVMKLRADLSNMHLIDDGTGKVL"
     gene            5450..6217
                     /locus_tag="VF991_22310"
     CDS             5450..6217
                     /locus_tag="VF991_22310"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9559242.1"
                     /translation="MASLTGKVAWVTGAGSGIGQAAAIALAKEGATVVLTGRRKEPLD
                     ATAAAIKQAGGKAIVKPGDLMKASSVTRIANDIDKKFGRCDILVNNAGLNILERKWSQ
                     LTPAGAELVIDGNLSSAFYCSTAVLPLMRKRKDGVLIHTSSMAGRQASILSGAAYSAA
                     KHGVVAMSHTINMEECVNGIRSCVVCPGEVATPILDKRPVPVTKEERARMAQSEDVGD
                     LIRYIACLPPHIVINEVMINPTWNRGYVANLQRTGRA"
     gene            6316..7443
                     /locus_tag="VF991_22315"
     CDS             6316..7443
                     /locus_tag="VF991_22315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate/lactate/ureidoglycolate dehydrogenase"
                     /protein_id="HEX9559243.1"
                     /translation="MTVTIKAKALEAFVADIFASAGCSKDEGGRIGRYLVSANLSGHD
                     SHGVVRVPRYAAQKKNGTVVADVTVDVLVDTPVIAVIDGKYGFGQTVTPQAVRIGIDK
                     CRRNGLSAVTLRNAGHVGRVGDWAEMAAEAGLVSIHFVNASGSVLVAPYGGVQRRFST
                     APYCVGVPWPGHDPLVLDFATSVVAEGKVLVASQGGKKVPEGALIGPDGEPSSDPHLL
                     YGDYTPTGPRDHSKGTGAIQAFGDHKGSGLAFMCEILGGALSGTGTTDPKRGRFANGM
                     LSFYVDPSAFDPVGFFPADIAKYVDFVKSAQPSAPGGEVLVPGEPEVRMRATRLAEGV
                     PLPDDTWAATVACSRSASKAIFAFSAASIFRLVLWVIFRSV"
BASE COUNT         1364 a         2533 c         2410 g         1326 t
ORIGIN      
        1 ctcgtgcggc cgctcgcctt cgggcaggaa atccttgtag gtctcgtcga gcagcagtgc
       61 gatcttgtgc ttcttcgcga gctcgaagaa ggcgtggatg gtggccggcg gatagacggc
      121 gccggtcggg ttgttgggcg agatcagcac gatggcgcgc gtcttggggc cgatcagctt
      181 ttcggcatcc tcggggtcgg gcacggcgcc cgaaccggga cgaaaatcga gcgccaccgg
      241 ctcgatgccc tgcatgcgta tccacatgtc gtgattgaag tagtgcggac ggggcaggat
      301 cacctggtcg ccggcgcggg ccaggctcat cagggcgaga cagaaggcct ggttgcaacc
      361 cgacgtgatg ccgacctcgc cggccgtgat ggcagcgcca tagaagcggc cgagatgggc
      421 ggcataatcc tcgcgcaacg ccggcaggcc cagggtcggc gtgtagccgt gcatcgtcgg
      481 atcgagcagc agctcgccga ggtggcgtcg cagctcgagc gccggcggat agcccggcac
      541 cgcctggctg aggtcgatca gcggccggtc ggcagggaag gtgcgcccga gcacccagcg
      601 tctggtctcg ccgatcggcg aaggctcgac agcggcaagc cacggattgg cggcgacagt
      661 ggtctgcatg tcagtcgatc acggtcgcct ggcgatttcg atcgtggcga aagcaagacc
      721 catggatcga tttcacagtc ttttttcgca cgatggtcct ttcgccgttg ccgccggccg
      781 gagcatccgg gtcctctcgg aagctgtcaa acagctgaca aagcccgtct atccggaaat
      841 gcattgcttg atccgaggct tatgcatagc atccccgtca agactccctc tgagagtcaa
      901 cgaaacgcgc aggaggaaat cgcatggtat cccggaaagt cagccgtcgt cggtttgtgg
      961 ctgcgaccgc ggccgcatcg acggcgttcg tcgccgcgcc cttcgttcgc ggcgcctatg
     1021 ccgcgggcaa gctgaacgtg ggcttctggg accattgggt gcccggtgcc aacgcggcca
     1081 ccgaaacgct gatcaaggaa tgggccgaca aggagaaggt cgaggtccag gtcgatttca
     1141 tcacctcgca aggcaacaag ctcctgctga ccatcgcggc agagtcccag gcgaagtcgg
     1201 gtcacgacat cctggcgatg gccaccttcc tgccggcgcg ctactctgag cagctgacgc
     1261 cgatgaacga cgtcgtcgag cagctgatca aggataacgg caaggtgaac gccaccgtcg
     1321 agtatctcgg caaggtcggc ggcaagtggc ttgccgtgcc ggcgacggtt ggcagccaga
     1381 tgaaggggcc gtgctcgcgc atcgatctca tgaaggacct ggccggcatc gacatccagg
     1441 cgatgtatcc tgccggtgcg ccacccaagg ccgacggctg gaccctcgac accttcctca
     1501 aggctgccga ggcttgccag aagggcggca aaccgttcgg catcgggctc ggcaccacct
     1561 cggactcggt cgacacgatc ggcgcggtct tccactcctt cggcgccgtc ctcgtcgatg
     1621 ccaagggaga gatcgtcctc aagaacgatc aagtgcgcca agccctcgac tactacaaga
     1681 agctgatagc cttcctgccg cccgacgtac cgtcatggga cgattcgtcc aacaacaagt
     1741 ggctgatcgc gggacagggc gcactgatca tgaacccgcc cagcgcctgg gcggtggcca
     1801 agcgagatgc gcccaaggtc gccgaacagt gctggacgca cggcttcccc gccggcccca
     1861 agggccgctt cgggccgttc ctgccgttct tctggggcac ctggagcttc agcaagaacc
     1921 agtcggcggc caagagcctg ctcgcctatc tctcgcaggc ttcgtcggcc gagaagatgg
     1981 tggtcgccag cggcggctat gacctgccgt cgttcgagaa gctcaccacc ttcaagacct
     2041 gggccgagga agggccgccc aagggcacgc tctaccacta tcccaacccg cacaatcacc
     2101 agatcctctc gatcgccgcg gcgcccgcgc cgcacaagat cgccgagcag atctacaccc
     2161 agggcatcat gacccagatg gccgtccgct attacagggg cgaggccatg gacaagacgc
     2221 tcgactgggc ggccaaggag atcgaaggct ttatgcgcaa ctaggcaggg cccggggatc
     2281 atcggcgggg cgcggttcgg cgctccgccg cctgagcctc cgggagcgcc aagagacctg
     2341 caacgtcgga gctagagtcg gagctagata tggcagatat tgccgccaga ggaccggtcg
     2401 cgatcaccac aggcggccgc agcagcctgc acaagctgat gcagcgcaaa tcgaccatcg
     2461 ccttcctgat ggcgctgccg ttgatcctgc tgatcaccct gctcgtggcc tatccggcgg
     2521 gctacgccgt ctatttggcg acgctcaaca agggcatgac ccgcttcgtc gggctcggca
     2581 acttcgactt tctgttcggc cgcgacacct tctggatggt ggtctaccag tcctgcctgt
     2641 tcgcgatcac cgccgtgatc ttcaaggcga tcatcggttt cgtggtcgcc catttcgtgc
     2701 acaacatccc gagcaagggc cagcgcaagt ggcgcggcat gctgttggtt ccgtgggtca
     2761 ttccaccggc catgagcacg ctcgcctggc tgtggctgtt cgacccgtcc tactcggcct
     2821 tcaactggat cttcgagcat atcggcctcg accacatcgc ctggctgggc gagaccggct
     2881 gggcgcgctt ctcggtcatc ctggtgaacg tgtggatcgg cgcgccgttc ttcatgatca
     2941 tgtacctggc ggcgctgaaa tctgtgcccg agcagctcta cgaggcggcg tcgatcgacg
     3001 gcgccacctg gtggcagcgc atctggtacg tgaccctgcc gatgatgcgc aacatcatcg
     3061 ccatcaccgc gctgttctcg ctgatcgtca ccttcgccaa cttcgacatc gtgcgcgtct
     3121 tgaccaaggg cgatccgctc aacaccacgc acatcttcgg cacctgggcg ttccgcgtcg
     3181 gcatcgaaag cggcgacatc ccgctgggcg ccaccgtctc gctgttcatg gtgccgatcc
     3241 tggcggtcgc cgcgaccttc atcctgcgcg acatcaccaa gcgggggagt gaagtctgat
     3301 ggccgacgcc gcgatcgccg cccgcaccgc ctcgacgcgg tcccgcaccg gatacggcag
     3361 catcagccgc gaccgccgct gggcgctgcg ctggtcctat ttcttcctgg tgctgttcgc
     3421 catcttcttc ctgctgccgc cgctctacat gctgatcacg tcgctgaaat ccagcgccga
     3481 gatctcggcc gcgaccaatc cgtggtgggt ctattcgccg accttgtcca actacatcga
     3541 gctgctgacg cagaaccagt acctcacctt cttccgtaac tcggcgatcg tctcggtgtt
     3601 cgtggtggcg atcaccatgt cgatcagcgt catcgccgcc ttcgcgctcg cccgcatgcg
     3661 gttctggggc tcggccacct tggcgaccgg cgtcttcctg acctacctgg tccccgagac
     3721 gctgctgttc atcccgctgt tcaagatgtt cgcctgggtc aacgagacct tcgacatcca
     3781 gctgatgaac cactggtgga cgttgatgat cctctatccg acgctcaccg tgccgttcgc
     3841 cacctggatc atgatcggct acttcgcctc gatccccaag gagctcgacg aggcggcgct
     3901 gatcgacggc gcctcgtgga tgcagacgct gaccaagatc ttcatcccgg tggcgctgcc
     3961 cggcatcatc gccgccacca tcttcacctt caccgtggcg tgggcgcagt tcctctatcc
     4021 gctggccttc accacctcga cgaccgagct ggtgctgccg gtcggcatcg tcaccaccct
     4081 gatcaagggc gacgtgttca actggggcca gatcatgacc ggcgcgctcc ttggcgcggc
     4141 gccaccgctg atcatctacg ccttcctcat ggactactac attgcgggtc tgacggccgg
     4201 cgcgaccaaa gggtaaggga tacaatggct caggtaacgt tgcgtaaagt catcaagaaa
     4261 tacgacgaag tcctggccgt tcgcggcatc gacctcgaca tcaccgacaa ggagttcatc
     4321 gtgctggtcg ggccctcggg ctgcggcaag agcacgacct tgcgcatgat cgccggtctc
     4381 gaggagatca gcgacggcga catcgcaatc ggcggccacg tcgtcaacga cgtgccgccc
     4441 aaggatcgcg acatcgccat ggtgttccag aactacgcgc tctacccgca catgaacgtc
     4501 tacgagaaca tgtcgttcgg gctgaagctc aagcgcacgc ccaaggacga gatcgaccgg
     4561 cgggtcaagc aggccgccca gatcctcgac atcaccgagc ttctcgatcg caagcccaag
     4621 cagctctcgg gcggccagcg ccagcgcgtc gccatgggcc gcgccatcgt gcgcgatccc
     4681 aaggtgttcc tgttcgacga gccgctttcc aacctcgacg ccaagctgcg cgtgcagatg
     4741 cgcaccgaga tcaagaaggt ccaccagaag gtgcgcacca ccacggtcta cgtgacccac
     4801 gaccaggtcg aggcgatgac gctggccgac cgcgtggtgg tgatgaatgc cggcctgatc
     4861 gagcaggtcg gctcgcccaa cgacctctat cattcgccgg ccaccaagtt cgtggcgggc
     4921 ttcatcggct cgccggcgat gaacttcatc ccctgccatc tcgagcaggc cgccggcgcg
     4981 ttgcgcgtgc ggctgagcga cacgctcgcc tttccggtgc cggccgaccg cacggcgcgc
     5041 tacaccagcc atgtcggcaa ggccaacctc atcctcggcc ttcgtcccga gcacatcatc
     5101 gagacccgtc cgcatgtcga acccaaccag cacgatttcg aaaacgtgat cgacgtcgtc
     5161 gagccgatgg gcatggaaac actggtctat ttcaccatcg tcggggcgga gatctgcggc
     5221 cgggtcaatc ccaacgccgg ggcgacggcg ggcaaggtca tgaagctcag ggccgacctc
     5281 agcaacatgc acctgatcga cgacggcacg ggcaaggtgc tttaatgaca ggggcgggcc
     5341 gtccggcccg cccctgtcat cccgaacgaa gtgagggatc ttttctgaga ctccaaagat
     5401 ccctcgccgt gctcgggatg acaaatgttc aaaattcaag gagacatcga tggcttcgtt
     5461 gacgggcaag gtcgcctggg tgaccggtgc tggctccggt atcggtcagg cggcggcgat
     5521 cgcgctcgcc aaggaaggcg ccaccgtggt gttgaccgga cggcgcaagg agccgctcga
     5581 cgcgaccgcc gcagccatca agcaggcggg cggcaaggcc atcgtgaagc cgggcgatct
     5641 gatgaaggcc tcttcggtga cccgcatcgc caacgacatc gataaaaagt tcggccgctg
     5701 cgacatcctg gtgaacaatg ccggcctcaa catcctggag cggaagtgga gccagctcac
     5761 cccggcgggt gccgagctgg tgatcgatgg caacctgtcg agcgccttct actgctcgac
     5821 cgcggtgctg ccgctgatgc gcaagcgcaa ggacggcgtg ctgatccata cttcgtcgat
     5881 ggcgggccga caggcgagca tcctgagcgg tgcggcctat tcggcggcca agcacggcgt
     5941 ggtggcgatg agccacacga tcaacatgga ggaatgcgtc aacggcatcc gctcctgcgt
     6001 ggtctgcccg ggcgaggtcg cgacgccgat cctcgacaag cggccggtgc ccgtcaccaa
     6061 ggaagagcgc gcacgcatgg cccagtcgga ggatgtcggc gacctgatcc gctacatcgc
     6121 ctgcctgccg ccgcacatcg tgatcaacga ggtcatgatc aacccgacct ggaaccgcgg
     6181 ctacgtcgcc aacttgcaac gcaccggcag ggcttaatct ttcggactcg gcgcattcac
     6241 atgcgcctga gggcgtcccg cccgctcatg agcgggcggg acgcccgcgg tccgaaagac
     6301 aatgaggaag agcgtatgac ggtgaccatc aaggcgaagg cgctggaagc tttcgtcgcc
     6361 gacatctttg cctcggcggg ctgctccaag gacgagggcg gccgtatcgg ccgctacctg
     6421 gtgagcgcca atctatcggg ccacgacagc cacggtgtcg tgcgcgtgcc gcgctacgcg
     6481 gcgcagaaaa agaacggcac cgtggtggcc gacgtcacgg tcgatgtctt ggtcgacacg
     6541 ccggtgatcg ccgtgatcga cggcaagtat ggcttcggcc agaccgtgac tccgcaggcg
     6601 gtccgcatcg gcatcgacaa gtgccgcagg aacggcctct ccgcggtgac cctgcgcaat
     6661 gccggtcatg tcggccgggt cggcgactgg gccgagatgg cggccgaggc gggactggtc
     6721 tcgatccatt tcgtcaatgc ctcgggcagc gtgctggtgg cgccctatgg cggcgtgcag
     6781 cggcgcttct cgacggcgcc ctattgtgtg ggcgtgccgt ggccgggtca cgacccgctg
     6841 gtgctcgact tcgccacctc ggtcgtggcc gagggcaagg tgctggtggc gagccagggc
     6901 ggcaagaagg tgcccgaggg cgcgctgatc gggcccgacg gcgagcccag cagcgacccg
     6961 cacctgctct atggcgacta cacgccgacc ggcccgcgcg accacagcaa gggcaccggc
     7021 gccatccagg ccttcggcga ccacaagggc tcggggctgg ccttcatgtg cgagatcctg
     7081 ggcggggcgc tgtcgggcac cggcacgacc gatcccaagc gcggccgctt cgccaacggc
     7141 atgctgtcct tctacgtcga tccctcggcg ttcgacccgg tgggcttctt ccccgccgac
     7201 atcgccaagt acgtcgactt cgtgaagagc gcccagcctt cggcgcctgg cggcgaggtg
     7261 ctggtgccgg gcgagcccga ggtgcgcatg cgtgccacgc ggctggccga gggcgtgccg
     7321 ctgcccgacg acacctgggc cgccaccgtc gcctgctctc gcagcgcctc caaggcaatc
     7381 ttcgccttca gcgccgcatc gatcttccgt ctcgtcctct gggtcatatt ccgctccgtc
     7441 tagcatgacg gaacggctca cgctccaact atgcccctgg tcccaaaaat ggggcccact
     7501 tcaaaggcag caagacaagg aggacaatcc accatggaac cggccttgac tgcgggagat
     7561 tcggctgggg gatcggcgct gggtcaaact ctctccatgt tacgaatggc ggcagcgggc
     7621 gaccgtgaat aca
//
LOCUS       DASWGA010000973         2567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1765260, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000973 DASWGA010000000
VERSION     DASWGA010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1765260"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="VF991_22320"
     CDS             complement(<1..560)
                     /locus_tag="VF991_22320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9559244.1"
                     /translation="MTAYIIRRLLATLPVMAVVALFVFFLLRLAPGDPAAIIAGEDAT
                     SEAIAAVRAKLGLDRPVAEQFVVWLWSLLQGDMGVSIFSNLPVTRLIGQRLEPTVALT
                     LSTLFVAVALAVPIGVVAAWKARKLVDRLVMGFAVLGFAMPGFVLAYVLIYFFAVQWQ
                     LLPVQGYQPMSAGLWPFAERLILPSVA"
     gene            complement(691..2268)
                     /locus_tag="VF991_22325"
     CDS             complement(691..2268)
                     /locus_tag="VF991_22325"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559245.1"
                     /translation="MMLRLLIALVALVLPLSAMAQEKVLRAVLHADVRVIDPIWTTQT
                     IANIHGALVYDTLFGNDADQKPQPQMVGKYEISPDRLTYTFTLRDGLKFHDGAPVTTK
                     DVIASLKRWGAKDGVGQRLMGYVTGLDAIDDKTFKMVLREPYGMVLESLGKTGSSIAA
                     IMREKEAQTDPQQQVKESIGSGPFVFAKDQWVPGSKAVYLKNKDYVPRPGNEPPSGFA
                     GSKVPGVDRIELVWISDPQTAMSALVNGEIDFYENPNTDFLPLLAKAKGVKLLKTGQI
                     DSTQGMIRLNHLHPPFDNVKARQAMYYLINQEDFLRAIVGDPKYYRVCPGLLTCGGPY
                     ENDGGTAFMKEYNPKKALQLLKEAGYKGEPITVLAATDHATITPATQVLIQAMREAGI
                     NLDVQSMDWGSVVSRRAKKEPPAQGGWNIFVTTSGGVGSANPVLHTWIGAACDKGLFG
                     WPCDPEIEKLRNAFGMAASEDERKKIAKELQTRAMEDVVFLPFGQWDQPLAFRADRID
                     GIVPNTGLTVLWGITKK"
BASE COUNT          449 a          842 c          823 g          453 t
ORIGIN      
        1 gccaccgagg gcaggatcag tctttcggcg aacggccaca ggcccgcact catcggctga
       61 tagccctgca ccggcaggag ctgccattgc acggcgaaga agtagatcag gacataggcc
      121 agcacgaacc ccggcatggc gaaacccagc acggcgaagc ccatgacaag gcggtcgacc
      181 agcttgcgcg ccttccaggc ggcgacgacg ccgatgggaa cggcaagcgc caccgccacg
      241 aacagcgtcg acagcgtgag cgccaccgtc ggctcgagcc gctggccgat cagccgcgtc
      301 actggcaggt tggagaagat cgacacgccc atgtcgccct gcagcaggga ccacagccac
      361 acgacgaact gctcggcgac cggccggtcc agcccgagct tggcgcgcac ggcggcgatc
      421 gcttcgctcg tggcgtcctc accggcgatg atcgccgctg gatcgcccgg cgccaggcgc
      481 aacaggaaga acacgaacag cgccaccacc gccatgacgg gcagcgtggc gagcagacga
      541 cggatgatgt aggcggtcac gacggcgaag ccgtcaccct gagcagagcg aagcgaagtc
      601 gaagggtctc tcttcgctgg acggcaagaa gagatccctc cactgcgcct cgctgcgctc
      661 ggcttcggtc gggatgacga ccttcgttcg tcacttcttc gtaattcccc acaacaccgt
      721 caatccagta ttgggcacga tgccgtcgat cctgtcggcg cggaaggcga gcggctggtc
      781 ccattggccg aacggcagga acaccacgtc ttccatggcg cgggtctgca gctccttggc
      841 gatcttcttg cgctcgtcct cgctggccgc catgccgaag gcgttgcgca acttttcgat
      901 ctcgggatcg cagggccagc cgaacaggcc cttgtcgcag gcggcaccga tccaggtatg
      961 gaggaccgga ttggccgagc cgacgccgcc cgaggtggtg acgaagatgt tccagccgcc
     1021 ctgcgccggc ggctccttct tggcgcgccg cgacacgaca gagccccagt ccatcgactg
     1081 gacatcgagg ttgatgccgg cctctcgcat cgcctggatc aggacctgtg tggccggcgt
     1141 gatggtggcg tggtcggtgg cggccagcac ggtgatcggc tcgcccttgt agccggcctc
     1201 cttcaggagc tgcagcgcct tcttgggatt gtattccttc atgaaggcgg tgccgccgtc
     1261 gttctcgtaa ggaccgccgc aggtcagcag gcccgggcag acgcggtagt atttcggatc
     1321 gccgacgatg gcgcgcagga aatcctcctg gttgatcagg tagtacatcg cctgccgcgc
     1381 cttcacgttg tcgaacggcg gatgcaggtg attgagccgg atcatgccct gcgtgctgtc
     1441 gatctggccg gtcttcaaca gttttacgcc cttggccttg gcgagcagcg gcaggaagtc
     1501 ggtgttggga ttttcgtaga aatcgatctc gccgttgacc agcgccgaca tcgccgtctg
     1561 cggatcggag atccacacca gctcgatgcg gtcgacgccg gggaccttcg agccggcgaa
     1621 gcccgacggc ggctcgttgc cgggccgcgg cacgtagtcc ttgttcttga gatagaccgc
     1681 cttgctgccc ggcacccact ggtccttggc gaagacgaac ggaccggagc cgatcgattc
     1741 cttgacctgc tgctgcgggt cggtctgcgc ttccttctcg cgcatgatgg cggcgatcga
     1801 gctgccggtc ttgccgagcg attccagcac catgccgtag ggttcgcgca gcaccatctt
     1861 gaaggtcttg tcgtcgatgg cgtccagccc cgtgacatag cccatcaggc gctggccgac
     1921 gccgtccttg gcaccccagc gcttcagcga ggcaatcacg tccttggtgg tgaccggcgc
     1981 gccgtcgtgg aatttcaggc cgtcgcgcag ggtgaaggtg taggtcagcc ggtccgggct
     2041 gatctcgtac ttgccgacca tctgcggctg cggcttctgg tcggcgtcgt tgccgaacag
     2101 cgtgtcgtag accagcgcgc cgtggatgtt ggcgatggtc tgggtggtcc agatcggatc
     2161 gatcacccgc acgtcggcat gcaacaccgc gcgcagcacc ttttcctgcg ccattgccga
     2221 cagcggcagg accaacgcga ccaaggcgat cagcagtcgc aacatcatga cagccccctg
     2281 aaactcataa actccccgtg cacaaagtat gcaaagcggc gcgcttgtcc agcacgctgt
     2341 catgctcttc cggaccgcga gcctccggct cgctcatgat catgagcgcg cgagacgcgc
     2401 gcggtccgga aaactaaaag atcaacccca gcggcttggc gttctcgtcg agcggccaga
     2461 tcggccgctg cacctttgta tagggcacct tgcgatggtc gcgacgcagc ggcccgctcg
     2521 attcgacgta gatcaccttc ttggcgatcg ggccataggc cgccatg
//
LOCUS       DASWGA010000974         1777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_114573, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000974 DASWGA010000000
VERSION     DASWGA010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114573"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..920
                     /locus_tag="VF991_22330"
     CDS             <1..920
                     /locus_tag="VF991_22330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9559246.1"
                     /translation="RVADRVAILERGTIVEEAPSGRIFRQPAHDYTRRLVAAVPRPER
                     RLVGDRPSPQALLAADRIAVRYRRKRLLRAAPPPATADVALDIRRGEILGIVGESGSG
                     KSSIARALTGLADYSGTITLAGRRIGSAADMDRGYRRAVQIVFQHPDSSLNPRHTVGD
                     ILARPIKLFGGALSAIPALLEEVRLPASFARRYPHQLSGGEKQRVAIARAFAAKPDLV
                     ICDEITAPLDVSVQASVVELLLRLREANGTAYLFITHDLNLVQQVAHRIAVMKDGAIV
                     DLLDIDALRSGKMGAYTRELIAASPAPVG"
     gene            934..>1777
                     /locus_tag="VF991_22335"
     CDS             934..>1777
                     /locus_tag="VF991_22335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007812281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9559247.1"
                     /translation="MQAKDILARLDTSFCLKFLSRMVQHKSYSQSEGERVLAGWMAEQ
                     MQGLGLEVELTPVEGERVNAVGRLRGSGGGKSLLFNGHIDTNPVTEGWTVDPWGGKVD
                     DKFIYGIGVSNMKSGDAAYFCALKTLIDAGAKLKGDVILTYVVGELQGGVGTVALLKQ
                     GWRADYFVNSEPTDLQALTMHAAAFVFTVELVGDTRHLSKREEAVDALVAACDLVPRL
                     NALKFSGAASPEHAKINRVHVGVMHAALGKELHEWRPPQVADFVRIKGSGRYAPGQSD
                     EGALA"
BASE COUNT          288 a          637 c          598 g          254 t
ORIGIN      
        1 cgcgcgtcgc cgaccgagtc gccatcctgg agcgcggaac gatcgtcgag gaggcgccga
       61 gcgggcgcat cttccgccag cccgcgcacg actacacgcg acggctggtc gccgccgtgc
      121 cgcggcccga gcggcggctg gtcggcgacc ggccgtcgcc gcaggcgcta ctggccgccg
      181 acaggatcgc cgtgcgctac cggcgcaagc gcctgttgcg ggccgcaccc ccgcccgcca
      241 cggccgacgt cgcactcgac atcaggcgcg gcgagattct aggcatcgtg ggcgaatcag
      301 ggtcgggcaa gtcgtcgatc gcccgcgctc tgaccgggct cgccgactac agcggcacca
      361 ttacgctcgc cggccggcgc atcggctcgg ccgccgacat ggaccgcggc tatcgccggg
      421 cggtgcagat cgtcttccag cacccggatt cctcgctcaa cccgcgccac accgtaggcg
      481 atatcctggc ccgcccaatc aagctctttg gcggggcgct gtcggcgatc cccgcccttc
      541 tggaagaggt ccgcctgccg gcgagcttcg ccaggcgcta tccgcaccag ctctcgggcg
      601 gcgagaagca gcgcgtagcg atcgcgcgcg ccttcgcggc caagcccgac ctggtgatct
      661 gcgacgagat caccgccccg ctcgatgtct cggtgcaggc ctcggtggtc gagctgctgc
      721 tgcgcctgcg cgaagccaac ggcacggcct acctcttcat cacccacgac ctcaacctgg
      781 tgcagcaggt cgcccaccgc atcgccgtca tgaaggacgg cgcgatcgtc gatcttttgg
      841 acatcgacgc gctgcgttcg ggcaagatgg gggcctacac gcgcgagctg atcgcggcct
      901 cgccggcacc ggttggctga acaggagacg accatgcaag ccaaggacat cctcgccagg
      961 ctcgacacca gcttctgcct aaaattcctg agccgcatgg tgcagcacaa gagttacagc
     1021 cagagcgagg gcgagcgcgt gctggccggc tggatggccg agcagatgca gggcctcggg
     1081 ctggaggtag agctcacgcc ggtcgagggc gagcgcgtca acgcggtcgg ccggctgcgc
     1141 ggcagcggcg gcggcaagag cctgctgttc aacggccaca tcgacaccaa tcccgtcacc
     1201 gaaggctgga ccgtcgatcc ctggggcggc aaggtcgacg acaagttcat ctacggcatc
     1261 ggcgtctcca acatgaagtc gggcgacgcc gcctacttct gcgcgctgaa gacgctgatc
     1321 gacgccggcg ccaagctcaa gggcgacgtc atcctgacct acgtggtggg cgagctgcag
     1381 ggcggcgtcg gcacggtggc gctgctgaag caaggctggc gcgccgacta tttcgtcaac
     1441 agcgaaccga ccgacctgca ggcgctcacc atgcatgccg cggccttcgt cttcaccgtc
     1501 gagctggtag gcgacacgcg ccacctctcc aagcgcgagg aggcggtcga tgccctggtc
     1561 gccgcctgcg acctcgtccc gcggctgaac gcgctgaaat tctccggcgc cgcctcgccc
     1621 gagcacgcca agatcaaccg tgtgcatgtc ggcgtcatgc acgccgccct cggcaaggag
     1681 ctgcatgaat ggcggccgcc ccaggtcgcc gacttcgtca ggatcaaggg ctcgggccgc
     1741 tatgccccgg ggcagagcga cgagggggcg ctggccg
//
LOCUS       DASWGA010000975         9040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1252802, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000975 DASWGA010000000
VERSION     DASWGA010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 9040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9040
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1252802"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..1641
                     /locus_tag="VF991_22340"
     CDS             118..1641
                     /locus_tag="VF991_22340"
                     /inference="COORDINATES: protein motif:HMM:NF019011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M81 family metallopeptidase"
                     /protein_id="HEX9559248.1"
                     /translation="MARIAVGGFQHETNTFAPQQATWEDFLRADAWPPLLRGPEMIAG
                     VEGFNVPISGAVKRLPELGHEIVPLAWASAPPASYVTEDAYEKMWALFKEDLAKLGPF
                     DAIYLDLHGAMVAENTEDGEGELLRRIRGVVGNDLPIVASLDYHANLTPDMAKLATAL
                     VGYRTYPHIDMAATGRRAADLLDRLLKEKRPVYRAYRQLDFLIPLVWQCTFIEPAKAI
                     FDFVGELEAGEKSHNQGIVSVTHTPGFPPADIAQCGPALVVYGHDREAVEAAADKLAQ
                     TVKAQEKAFAGELLDPDAATLRALELSKKAKKPIVLADVQDNPGAGGTSDTVGLLAAL
                     IRHKAKGAVIGMIVDEEAAKAAVETGEGNTMHRGIGAVVGYAGETPVVADWRVVKLGD
                     GKFTGTGPFYGGARFQIGPMALVTDEASGVSAVLASKRIQAADQEMFRHVGVEPSDVP
                     ILGLKSTVHFRADFQPIAETILVVQSPGAHITDPVEMPYKHLRKGIKLRPMGPVWGG"
     gene            1692..2669
                     /locus_tag="VF991_22345"
     CDS             1692..2669
                     /locus_tag="VF991_22345"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559249.1"
                     /translation="MRRRAAFRLLSGAAIWPFTAFAQGNRLYRIGVLETVPAERNAAN
                     LDALRRGLRELGYIEGQNLQIEYRSAAGRADRFPELADELLRHRVDLIVTRGTPAALA
                     AKAATTTVPIVMAAIGEPLGVGVVASLARPGGNITGLSAFVTELTAKRLELLKESFPL
                     IGRLGFMQNMGNPVSPPQWEASQAAARALGISVELLDVRTAQDIRGAFELIRERKLDA
                     LSVGVDAIMQAEADLIVELVAQRRLVTAYPAREFVEVGGLLSYGPSYPDLYFRAAAMI
                     DKIFKGARPGDLPVEQPTKLELVINLKTARTLGIVMPPILLARADEVIE"
     gene            complement(2719..3891)
                     /locus_tag="VF991_22350"
     CDS             complement(2719..3891)
                     /locus_tag="VF991_22350"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559250.1"
                     /translation="MTVAVSSPASSRRTLTVCGGAHALHDGFTDLLNVLYPLLQAQFG
                     LSYAAIGALKTVYSGAMASGQIPSGKLAVRFGGVRVLAIGTALVAVGYALAGLTGSLY
                     GVIAGLLLAGLGGSTQHPIGSSLVSAAFPGLSSRTALGTYNFTGDVGKMLLPALFAVI
                     AAWLGWQQAMVVVGALAIAGAGVILASLKPMALHGNANEIKAMAGQDRPWAYWLLFSI
                     HIADDLVRTGFMIFLPFLLRDKGADLPTIGLGLSLLFAGGAAGKLVMGWVGAKLGVVP
                     SVILTEVATTLLILVLLPLSLPLALVLLPVVGLMLNGTSSVLYGTVPEFVSPARRTHA
                     FAIFYTGGSVAGATGPLLAGLLGDAVGLPIALATVSCIALTTVPMVWALRPAFRSG"
     gene            complement(3907..4395)
                     /locus_tag="VF991_22355"
     CDS             complement(3907..4395)
                     /locus_tag="VF991_22355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559251.1"
                     /translation="MPTSTFSRRALFGAALCLPAAVSIGACSQMSGKPRYTLSPRGDR
                     LVRWLQNEGKDTMLAPDALALMGITNEDRWIPARQFGEDGPDGRYVVSLVNIRNIHEF
                     VFHRRQGDVLILHNSDTAFKRLTSVRWARNGKPTVITDTAFADSDFQQQTAFWFSRLP
                     GR"
     gene            complement(4398..4820)
                     /gene="hisI"
                     /locus_tag="VF991_22360"
     CDS             complement(4398..4820)
                     /gene="hisI"
                     /locus_tag="VF991_22360"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017406167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEX9559252.1"
                     /translation="MPTHETITYSPSAIDTFIAAIQFDSQGLVPAIAQQHDTGEVLMV
                     AWMDRDAVAETMRTGRVCYWSRSRQAPWRKGDTSGHIQTLVELRVDCDGDTLLALVDQ
                     TGAACHTGRHSCFFRAIREGSLQTIAPILVDMSPTDKE"
     gene            4887..5372
                     /locus_tag="VF991_22365"
     CDS             4887..5372
                     /locus_tag="VF991_22365"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX9559253.1"
                     /translation="MKKPAKAAAPSHDHRHCVEDALAAAEKVCAEKDLRFTPLRRRVL
                     ELVWSSHKPVGAYALLDELRNEDLGSAPPTIYRTLDFLIENGLIHRIERMNAFVGCSH
                     PGEAHRGFFLICSECGNAEELQSDGLAETISRSADRRGFAARDMTLEVTGTCAECRKS
                     A"
     gene            complement(5489..6682)
                     /gene="metC"
                     /locus_tag="VF991_22370"
     CDS             complement(5489..6682)
                     /gene="metC"
                     /locus_tag="VF991_22370"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEX9559254.1"
                     /translation="MTAKKTYTRPDTVLAVAGRDPANNFGIVNPPVYHASTILSPTME
                     KFENRVPFEGFGYGRNGTPTQKALEDAVAAIEGAHRSIAVQSGLGAVTGAIVGFLKTG
                     DHMLLTDNAYGPARRFANTTLKNFGVETTFFDPMIGADIERLIRPNTKVVYLEAPGSQ
                     TFEVQDVDAIAGVAKKHGAAVLVDNTWATPLYFKPFDHGCDLSIHAGTKYIVGHSDAM
                     MGIISCVTRQMFETAKTACQNLGFHAAPDDCYLALRGLRTMGVRLRHHEKSGIEVAHW
                     LKGRPEVDKVLHPALPDCPGHDNWKKQFKGSSGLFSFTLRDGYSKNALAAMLDGMDIF
                     GMGASWGGYESLMIPAHPDQYRTAVPWPKGKHLLRVHIGLEDVEDLKTDLAEGFDRLN
                     RAHNA"
     gene            complement(6704..7303)
                     /locus_tag="VF991_22375"
     CDS             complement(6704..7303)
                     /locus_tag="VF991_22375"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9559255.1"
                     /translation="MPTRPSPPVPELFAHQPPPRADGRLPITITHLEMARADWTRRGR
                     SPDIDVLLEHAAAPAVAVYRELYDRVGRPWLWYERRLLSDAELGALLAEPGHELHVAR
                     HDGDLVGYFELAGDELSFFGLTLAYVGRGIGSWLLDRAIERAFTRGTTRLCLNTNTLD
                     HPRALDTYRKAGFRSVRSERTELQDPRVQWPDLYRWPPK"
     gene            complement(7272..8129)
                     /gene="sseA"
                     /locus_tag="VF991_22380"
     CDS             complement(7272..8129)
                     /gene="sseA"
                     /locus_tag="VF991_22380"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004792 - thiosulfate sulfurtransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HEX9559256.1"
                     /translation="MDYARPDALVSTDWLAARLDAPDIRLVDGSFYLPVQKRDPRKEF
                     EHQHISGAVFFDIDEIADTTSPLPHMLPPPEKFSARVRKLGLGDGNKIVVYDTTPMLG
                     ATRVWWMFRAMGHRDVAVLDGGLPKWAAEGRPVTDDPTPPRERHFTARLDNTLVRSID
                     DVKALLDGKREQIVDARAANRFRGEVPEPRAGLRAGHMPGAYNLPYNDLIDPKTGTML
                     PADKLAARIAASGIDPSKKVTASCGSGVSACVVALGLYLTGAPEAAIYDGSWTEWGGR
                     ADTPIATGP"
     gene            complement(8141..8842)
                     /locus_tag="VF991_22385"
     CDS             complement(8141..8842)
                     /locus_tag="VF991_22385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanyl-tRNA editing protein"
                     /protein_id="HEX9559257.1"
                     /translation="MVEELFRQDAYLKQADATVTALEERGLRLDRSIFYPTGGGQPGD
                     TGILRWDGGEARVVDAVKADGGDVLHVLAPDSVRPQVGTKIQASLDWDRRLLHMRMHT
                     ALHVMSAVIKGDVTGGQVGADKSRLDFNLLGDVPAKEWVTEEINKLIALDRPVTPQWI
                     TDEELAARPELVKTMSVRPPMGAGRVRLLAIEGIDLQACGGTHVVRTGEIGRVECIKI
                     ENKGKMNRRFIIALA"
     gene            complement(8853..>9040)
                     /locus_tag="VF991_22390"
     CDS             complement(8853..>9040)
                     /locus_tag="VF991_22390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX9559258.1"
                     /translation="VDTTGAGDCFVGALAARMSAGATLVEAARYASAAAACSVERLGA
                     APSMPTVREVAARLARA"
BASE COUNT         1538 a         2909 c         3128 g         1465 t
ORIGIN      
        1 ctgatggagc gcgccgtcga gctgggttac gacaaggaat attggccggt gctgctgcgc
       61 gccatcgagg acgccgcggc gaagaagtga cagcgtagca agggggagag gggtttcatg
      121 gcgcgtatcg ctgtgggtgg ctttcagcac gagaccaata cgttcgcgcc gcaacaggcg
      181 acctgggaag atttcttgcg cgccgatgct tggccgccat tgctgcgcgg accggagatg
      241 atcgcaggcg tcgaaggctt taatgtcccg atctccggcg cggtaaagcg gctgccggag
      301 ctgggacacg agatcgtgcc gctggcctgg gcgtcggcgc cgccggcatc ctacgtcacc
      361 gaagacgcct acgaaaagat gtgggcgctg ttcaaagagg atctcgcgaa gctcgggccg
      421 ttcgatgcca tctatctcga cctgcatggc gccatggtgg cggaaaacac cgaggacggc
      481 gaaggcgagc tgctgcgccg catcaggggc gtcgttggca atgacctgcc gatcgtggcg
      541 agcctcgact atcacgccaa cctcacgccc gacatggcga agcttgccac tgcgctggtc
      601 ggctaccgca cctatccgca catcgacatg gcggcgacgg gcaggcgcgc ggctgacctg
      661 ttggaccggc tgctgaagga gaaacgcccg gtctatcgcg cctaccgcca gctcgacttc
      721 ttgatcccgc tggtctggca gtgcactttc atcgagcccg ccaaggccat cttcgatttc
      781 gtgggcgagc tcgaggccgg cgagaagagc cacaaccagg gcatcgtcag cgtcacccac
      841 acgccgggct tcccgccggc cgacatcgcg cagtgcgggc cggcgctggt ggtctacggt
      901 cacgacaggg aagcggtcga agcggcggcc gacaagcttg cccagaccgt gaaggcgcag
      961 gagaaggcgt tcgccggcga actgctcgat cccgatgccg ccacgctgcg cgccctcgag
     1021 ctttcgaaga aggccaagaa gccgatcgtt ctcgccgacg tccaggacaa tcccggcgcc
     1081 ggcggcacat ccgacacggt gggcttgctg gcggcgttga tacgccacaa agccaaaggt
     1141 gcagtgatcg gcatgatcgt cgacgaagag gcggccaagg cggccgtcga gaccggcgaa
     1201 ggcaatacga tgcatcgcgg catcggcgcc gtggtgggct acgccggcga gacgcccgtc
     1261 gtggccgact ggcgcgtcgt caagctgggc gacggcaagt ttaccggcac cggtccgttc
     1321 tacggcggcg cgcgcttcca gatcgggccg atggcgctgg tgaccgacga ggcaagcggc
     1381 gtgtcggcgg tgctggccag caagcgcatt caggcggccg accaggagat gtttcgccat
     1441 gtcggcgtcg agccgtctga cgtgccgatc ctcggcctga aatcgacggt gcatttccgc
     1501 gccgacttcc agcccattgc cgagaccatc ctggtggtcc agtcgcccgg cgcgcacatc
     1561 accgacccgg tcgagatgcc ctacaagcac ttgcgcaagg gcatcaagct ccggcccatg
     1621 ggcccggtgt ggggcggcta gggcctcttc atgccgccca cgatggtcgc cgccgacgac
     1681 ggggtgaccg aatgaggcgg cgtgccgctt tcaggctgct gagcggcgcg gcgatatggc
     1741 cgttcacagc attcgcgcaa ggcaaccgcc tctaccgtat cggcgtgctg gagaccgtgc
     1801 cagccgagcg aaatgccgca aacctcgacg ccttgcggcg cggcctgcgc gagcttggct
     1861 acatcgaggg ccagaatctc cagatcgaat accggtcggc ggcgggccga gcagaccgct
     1921 tccccgaact cgcggatgag ctcctgcggc accgcgttga tctcatcgtg actcgtggaa
     1981 cgccggcggc gctggcggcc aaggcggcga caacgacggt cccgatcgtg atggcggcga
     2041 tcggtgaacc gctcggtgtc ggggtcgtcg ccagcttggc gaggccgggc ggcaacatta
     2101 cgggcttgag cgcgttcgtg acggagctca ccgccaagcg cctcgaactg ctgaaggagt
     2161 cattcccctt gatcgggcgc ctgggcttca tgcagaacat gggcaatccg gtctcgccgc
     2221 cgcaatggga agccagccag gcggcggccc gggccctcgg tatttcggtg gaactgctcg
     2281 atgtgcgcac cgcccaggac atcaggggcg cgttcgaact catccgcgag cgaaaactcg
     2341 acgcgctgtc ggtcggggtc gacgccataa tgcaagccga agccgatttg atcgtcgaat
     2401 tggtcgcaca gcgccgtttg gttaccgcct atccggcgcg cgagttcgtc gaggtcggtg
     2461 gccttttgag ctatggaccg agctatcccg atctgtactt ccgggcggcc gccatgatcg
     2521 acaagatctt caagggcgcg cgccccggcg acctgcccgt ggagcaaccc acgaagctcg
     2581 aactggtgat caatctgaag accgcaagaa cactgggtat tgtgatgccg ccgatcctgc
     2641 ttgcccgcgc cgacgaggtg atcgaatgag gcggtggcat ccgttggctt tgaccggcgg
     2701 cgcggcctgc gccgcaactt agcccgaccg gaacgccggg cgcagcgccc acaccatcgg
     2761 caccgtcgtg agggcaatgc aagacaccgt cgccaaggcg atcggcagtc cgacggcatc
     2821 acccaacaag ccggcgagga gcgggccggt ggcgcccgcc accgaaccgc cggtgtagaa
     2881 gatggcgaag gcgtgcgtgc gccgcgccgg gctcacgaac tcgggcacgg tgccgtagag
     2941 caccgacgag gtgccgttca gcatcaggcc gacgaccggc agcagaacca gcgcaagcgg
     3001 cagcgacagc ggcaggagaa cgaggatcag cagcgtcgtc gccacttcgg tgaggatgac
     3061 cgagggcacc acaccgagtt ttgcgccgac ccagcccatc accagcttgc ccgccgcgcc
     3121 gccggcgaac agcagcgaca ggccgagccc gatggtcggc aggtctgcgc ccttgtcgcg
     3181 caacaggaag ggcagaaaga tcatgaagcc ggtccgcacc aggtcgtcgg cgatgtggat
     3241 ggagaacagc agccaatagg cccacggccg gtcctggccc gccatcgcct tgatttcgtt
     3301 ggcgttgcca tgcagcgcca tcggcttcag ggaggcgagg atgacgcccg cgcccgcaat
     3361 ggcgagcgcg ccgacgacga ccattgcctg ctgccagccg agccaagcgg cgatcaccgc
     3421 gaacagcgcc ggcaatagca tcttgccgac gtcgccggtg aagttgtagg tgccgagcgc
     3481 ggtgcgcgag ctgaggccgg ggaacgccgc cgagaccagg ctcgaaccga tgggatgctg
     3541 cgtgctgccg ccgaggcccg ccagcagcag ccccgcgatc acgccgtaga gcgagccggt
     3601 gaggccggcc agggcataac ccacggcaac cagtgccgtg ccgatggcca gcacgcgcac
     3661 gccgccgaag cgcaccgcca gcttgcccga cgggatttgt ccgcttgcca tggcgccgga
     3721 atagaccgtc ttcagcgcac cgatggcggc gtagctcagg ccaaactggg cctgcagcag
     3781 cggataaagg acattgagca ggtcggtgaa gccgtcgtgc agcgcatgcg ccccgccgca
     3841 gaccgtgagc gtccggcggg acgaggcagg tgaggagacg gcgactgtca tctcccggtc
     3901 acattactac cgtccgggca ggcggctgaa ccaaaaagcg gtctgctgct ggaagtcgct
     3961 gtcggcgaag gcggtatcgg tgatgaccgt cggcttgccg ttgcgcgccc agcgcacgct
     4021 ggtcaggcgc ttgaaggccg tatcgctgtt gtggaggatc agcacgtcgc cctggcggcg
     4081 gtggaacacg aattcgtgga tgttgcggat attgaccagg ctcacgacgt agcggccgtc
     4141 cggtccgtct tcgccgaact gacgcgccgg aatccagcgg tcctcattgg tgatgcccat
     4201 caaagccagc gcgtcgggcg ccagcatggt gtccttgcct tcattctgga gccagcgcac
     4261 cagccggtcg ccgcgtggcg agagcgtgta ccgcggcttg ccggacatct ggctgcaggc
     4321 gccgatcgac acggcggccg gcaggcagag ggcggcgccg aataaagcgc gccgcgagaa
     4381 ggtgctggtg ggcaagctca ctccttgtcg gtgggactca tgtcgacgag gatcggcgcg
     4441 atcgtctgca gcgagccctc gcggatggcg cggaagaagc agctgtggcg accggtatgg
     4501 caagccgcgc cggtctgatc gaccagggcc agcagcgtgt cgccgtcgca gtcgaccctg
     4561 agctcgacca gcgtctgaat gtggccggaa gtgtcgccct tgcgccacgg tgcctggcgc
     4621 gagcgcgacc agtagcagac gcggccggtg cgcatcgtct cggcgacggc gtcgcgatcc
     4681 atccaggcca ccatcagcac ttcgcccgtg tcgtgctgct gggcgatagc gggcacgagg
     4741 ccctgggagt cgaactggat ggcggcgatg aaagtgtcga ttgcgctggg tgagtaggtg
     4801 atggtctcgt gagtgggcat ggcttggcct tacgaagaaa cggggcctat aatcaccttg
     4861 taactgcttg gcaaatcggc actctcgtga agaaaccggc gaaagccgcc gcccccagcc
     4921 atgatcaccg gcactgcgtg gaggatgccc tcgccgcggc cgagaaggtg tgcgccgaga
     4981 aggatctccg cttcacgccg ctgcgccggc gcgtgctcga gctggtgtgg tcgagtcaca
     5041 agccggtcgg cgcctatgcg ctgctcgacg aactgcgcaa cgaggatttg ggctcggcgc
     5101 cgcccaccat ctaccggacg ctcgattttt tgatcgagaa cgggctgatc caccgcatcg
     5161 agcgcatgaa tgccttcgtc ggctgcagcc atccgggcga ggcgcatcgc ggcttcttcc
     5221 tgatctgcag cgagtgcggc aatgccgagg aactgcagag cgacgggctg gccgagacga
     5281 tctcgcgcag cgccgaccgc cgcggctttg ccgcccgcga catgacgctc gaggtgacgg
     5341 gaacctgcgc ggagtgccgg aagtcagcct gagcgcagcg cctgtcctga gcgaagccga
     5401 aggaaaggat ctcttgccgt tgcaagcggc gatgaggtcc ttcgctgcgc ttcagcgcgg
     5461 gggttacccc gcgcgcgacg acaaaaatct aagcgttgtg cgcccggttc agccggtcga
     5521 agccctcggc gagatcggtc ttgagatcct cgacatcctc cagcccgata tgcacgcgca
     5581 gcaggtgctt gcccttgggc cacggaacgg cggtgcggta ctggtcggga tgggcgggga
     5641 tcatcaggct ttcatagccg ccccagctcg cgcccatgcc gaagatgtcc atgccgtcca
     5701 gcatcgccgc cagtgcgttc ttgctgtagc cgtcgcgcag ggtgaaggag aacaggccgg
     5761 acgagccttt gaactgcttc ttccagttat cgtgaccggg acagtcgggc agggcggggt
     5821 gcagcacctt gtcgacttcg ggccggcctt tcagccaatg ggcgacctcg atgccgctct
     5881 tctcgtgatg gcgcagccgc acgcccatgg tgcgcaggcc gcgcagcgcc aggtagcaat
     5941 cgtcaggcgc ggcgtggaag ccgagattct ggcacgccgt cttggccgtt tcgaacatct
     6001 gccgcgtgac gcaggagatg atgcccatca tggcgtcgga gtgcccgacg atgtacttgg
     6061 tgccggcgtg gatggagagg tcgcagccgt ggtcgaacgg tttgaaataa agcggcgtcg
     6121 cccaggtatt gtcgaccagc acggcggcgc catgcttctt ggcgacgccg gcgatggcat
     6181 cgacgtcctg cacctcgaag gtctgcgagc cgggcgcctc gagatagacc accttggtat
     6241 tgggccgtat cagcctttcg atgtcggctc cgatcatggg atcgaagaag gtcgtctcga
     6301 cgccgaagtt cttcagcgtg gtgttggcga agcgccgtgc cggaccgtag gcgttgtcgg
     6361 tcagcagcat gtgatcgcct gtcttcaaaa acccgacgat cgcgccggtg acggcgccga
     6421 ggccggactg cacggcgatc gagcgatggg cgccttcgat ggcggcgacc gcatcctcca
     6481 gggccttctg cgtcggcgtg ccattgcggc cgtagccaaa gccctcgaac ggcacgcggt
     6541 tctcgaactt ctccatggtc ggcgagagaa tggtcgaggc gtgatagacc ggcggattga
     6601 cgatgccgaa attgttggcg ggatcgcggc cggcgacggc taaaacggtg tcgggtctgg
     6661 tataagtttt cttcgcggtc atatcggcac tatggcacag gctttacttg ggcggccagc
     6721 gatagaggtc gggccattgc acgcgcggat cctgcaattc cgtgcgctcg ctgcgcaccg
     6781 agcgaaagcc cgccttgcgg tacgtgtcga gcgcgcgcgg gtgatcgagc gtgttggtgt
     6841 tgaggcaaag ccgcgtcgtg ccgcgcgtaa aagcccgctc gatcgcccga tcgagcagcc
     6901 atgagccgat cccgcggccg acataagcca gcgtgaggcc gaagaaggaa agttcgtcgc
     6961 cggccagttc gaaatagccg accagatcgc cgtcgtgtcg ggcgacgtgc agctcatggc
     7021 cgggctcggc cagcagagcg ccgagctcgg cgtcgctcag caggcgccgc tcataccaca
     7081 gccacggtcg accgacgcga tcgtagagct cgcggtagac agcgacggcg ggcgcggcag
     7141 cgtgctcgag caagacatcg atgtcgggcg accgcccgcg gcgggtccag tcggcccgcg
     7201 ccatctcgag atgcgtgatg gtgatcggca gcctgccgtc ggcgcgcggc ggtggctgat
     7261 gggcaaacag ctcagggacc ggtggcgatg ggcgtgtcgg cacggcctcc ccattcggtc
     7321 cacgagccgt cgtagatcgc cgcttccggc gcgccggtga gatagaggcc gagcgccacc
     7381 acgcaggcgc tgacccccga gccgcagctc gccgtcacct ttttcgacgg atcgatgccg
     7441 gacgcggcga tgcgtgcggc gagcttgtcg gccggcagca tcgtgccggt cttgggatcg
     7501 atcagatcgt tgtagggcag gttgtaggcg cccggcatgt ggccggcgcg caggccggcg
     7561 cgcggctcgg gcacctcgcc gcggaagcgg ttggcggcgc gggcgtcgac gatctgttcg
     7621 cgcttgccgt ccaaaagggc tttcacgtcg tcgatcgagc gcaccagcgt gttgtcgagc
     7681 cgcgccgtga agtgccgctc gcgcggcggc gtcggatcgt cggtgaccgg ccggccttcg
     7741 gccgcccact tgggcagccc gccgtcgagc acggcgacgt ccctgtggcc catggcgcgg
     7801 aacatccacc acacgcgtgt ggcgccgagc atcggtgtgg tgtcgtagac cacgatcttg
     7861 ttgccgtcgc ccaggccgag cttgcgcacg cgcgccgaga atttttccgg cggcggcaac
     7921 atgtggggca gtgggctcgt ggtatcggcg atctcgtcga tgtcgaagaa caccgcgccg
     7981 gaaatgtgct ggtgttcgaa ctccttcctg gggtcgcgct tctgcaccgg cagatagaac
     8041 gagccgtcga ccaggcgtat gtccggcgcg tcgagccggg cggccagcca gtcggtgctg
     8101 accagcgcat cgggtctggc gtaatccatg agcgtttccc ctacgcgagc gcaatgatga
     8161 accgccggtt catcttgccc ttgttctcga tctttatgca ctcgacccgg ccgatctcgc
     8221 cggtgcgcac cacgtgcgtg ccgccgcagg cctgcaggtc gatgccctcg atggcgagca
     8281 gccgcacccg tcccgcgccc atcggcgggc gcacgctcat ggtcttcacc agctccggtc
     8341 gcgccgccaa ctcctcgtcg gtgatccatt gcggcgtgac ggggcggtcg agcgcgatca
     8401 gcttgttgat ttcctcggtg acccattcct tggccgggac gtcgcctaaa agattgaaat
     8461 cgagccggct cttgtcggcg ccgacctggc cgccggtgac gtcacccttg atcaccgccg
     8521 acatgacgtg gagcgcggtg tgcatgcgca tgtgcagcag gcgacgatcc cagtcgagac
     8581 tggcctgaat cttcgtgccg acctggggcc gcaccgagtc gggcgccaac acgtgcagca
     8641 cgtcgccgcc gtcggctttc accgcatcga ccacgcgcgc ctcgccgccg tcccagcgca
     8701 ggatgccggt gtcgccgggc tgaccgccgc ctgtgggata gaagatcgag cggtcgagtc
     8761 gcagcccgcg ctcctcgagt gcggtcacgg tggcgtcggc ttgcttgaga taggcgtcct
     8821 gccggaagag ttcttcgacc atgagagggg atttaggccc tcgccagccg cgccgcaact
     8881 tcccgcaccg tcggcatcga aggcgccgcg cccagccgct cgacggaaca ggcggccgcg
     8941 gcgctggcat agcgtgcggc ctcgacgagc gtggcacccg ccgacatccg ggcggcgagc
     9001 gcgcccacga agcagtcgcc ggcgccggtc gtatcgacga
//
LOCUS       DASWGA010000976         3062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2254834, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000976 DASWGA010000000
VERSION     DASWGA010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2254834"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2314
                     /gene="rpoB"
                     /locus_tag="VF991_22395"
     CDS             <1..2314
                     /gene="rpoB"
                     /locus_tag="VF991_22395"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEX9559259.1"
                     /translation="FIESPYRKVVGSRVTDEVVYLSAMEEGRYTVAQANAEIDARGRF
                     TADLVQCRKGGEYILGRPETIDFVDVSPKQIVSVAAALIPFLENDDANRALMGSNMQR
                     QAVPLIQAESPLVGTGMEEVVARDSGVAIAARRTGIVDQVDAMRIVVRATEDVGPNRP
                     AVDIYNLLKFQRSNQSTCITQKPLVKVGDQVKKGDIVADGPSTRDGELALGRNVLVAF
                     MPWNGYNFEDSILLSERIVRDDVFTSIHIEEFEVMARDTKLGQEEISRDIPNVGEEAL
                     KNLDEAGIVYIGAEVKAGDILVGKVTPKGESPMTPEEKLLRAIFGEKAADVRDTSLKV
                     PPGVEGTVVEVRVFNRRGVDKDERALAIERDEIERLAKDRDDEKAILERSFYSQIQEM
                     LMNQTVAGGLKGLKPGTRITDKVLGEYTPGQWRTIAVKTDKRQSEIEASNKQFDESMK
                     RLQDRFDSKVDKLQRGDELPPGVMKMVKVFVATKRKLQPGDKMAGRHGNKGVISRIMP
                     LEDMPYLEDGTPVDIVLNPLGVPSRMNVGQILETHLGWAAAGLGKKIGDMVNGTRDAS
                     IAQVRKQLREVYGEKGYKADIADLDDESTVELAKNLSTGVPFASPVFDGAHEADIVGM
                     LEMAGLDKSGQVNLVDGRTGEAFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQ
                     QPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVAGRTKVYEAIVRGDDT
                     FEAGIPESFNVLVKELRSLGLNVELNQSAT"
     gene            2374..>3062
                     /locus_tag="VF991_22400"
     CDS             2374..>3062
                     /locus_tag="VF991_22400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEX9559260.1"
                     /translation="MTDLINVLGQPQGTPTFDEIRISIASPERIRTWSHGEIKKPETI
                     NYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKFRGITCEKCGVEVTLTKVRRERM
                     GHIELASPVAHIWFLKSLPSRIGLLLDMTLRDLERILYFENYVVTEPGLTPLKYRELL
                     NEDQYLNALDEYGDDSFRADIGAEAIRAMLQVIDLNEERPRLREELRETTSEAKRKKL
                     VKRLKLCESFI"
BASE COUNT          612 a         1021 c          987 g          442 t
ORIGIN      
        1 cttcatcgag agcccgtatc gcaaggtcgt gggcagccgc gtcaccgacg aggtcgtcta
       61 cctctcggcg atggaggaag gccgctacac ggtggcccag gccaacgccg agatcgacgc
      121 gcgcggccgc ttcaccgccg acctggtgca gtgccgcaag ggcggcgagt acatcctcgg
      181 ccggcccgag acgatcgact tcgtcgacgt ctcgcccaag cagatcgtct cggtcgccgc
      241 ggcgctgatc ccgttcctcg agaacgacga cgccaaccgc gcactgatgg gctccaacat
      301 gcagcgccag gcggtgccgc tgatccaggc cgaatcgccg ctggtcggca ccggcatgga
      361 agaagtggtg gcccgcgatt cgggcgtggc gatcgcggcg cgccgcaccg gcatcgtcga
      421 ccaggtcgat gccatgcgca tcgtcgtgcg cgccaccgag gatgtcggcc ccaaccgccc
      481 ggcggtcgac atctacaacc tcttgaagtt ccagcgctcc aaccagagca cctgcattac
      541 ccagaagccg cttgtgaagg tcggcgacca ggtgaagaag ggcgacatcg tggccgacgg
      601 tccgtcgacc cgcgatggcg agctggcgct cggccgcaac gtcctcgtcg ccttcatgcc
      661 gtggaacggc tacaacttcg aggactcgat cctgctctca gagcgcattg tgcgcgatga
      721 cgtcttcacc tcgatccata tcgaggagtt cgaggtcatg gcccgcgaca ccaagctcgg
      781 ccaggaggag atcagccgcg acatccccaa cgtcggcgag gaagcgctaa aaaacctcga
      841 cgaggcgggc atcgtctata tcggcgccga ggtgaaggcg ggcgacatcc tggtcggcaa
      901 ggtgacgccg aagggcgaga gcccgatgac cccggaagag aagctgttgc gcgccatctt
      961 cggcgagaag gccgccgacg tgcgcgacac ctcgctcaag gtgccgccgg gcgtcgaggg
     1021 cacggtcgtc gaggtccgcg tcttcaaccg ccgcggcgtc gacaaggacg agcgcgcgct
     1081 cgccatcgag cgcgacgaga tcgagcgtct ggccaaggac cgcgacgacg aaaaggccat
     1141 cctggagcgc agcttctaca gccagatcca ggaaatgctg atgaaccaga cggtggccgg
     1201 cgggctgaag ggcctgaagc cgggcacgcg catcaccgac aaggtgctgg gcgagtacac
     1261 gccgggccag tggcgcacga tcgccgtcaa gaccgacaag cggcagtccg agatcgaggc
     1321 gtcgaacaag cagttcgacg aatcgatgaa gcgcctgcag gaccgcttcg acagcaaggt
     1381 cgacaagctg cagcgcggcg acgagctgcc gccgggcgtg atgaagatgg tcaaggtctt
     1441 cgtcgccacc aagcgcaagc tgcagccggg cgacaagatg gctggccgcc acggcaacaa
     1501 gggcgtgatc tcgcgcatca tgccgctcga ggacatgccg tatctcgagg acggcacgcc
     1561 ggtcgacatc gtgctcaacc cgctcggcgt gccgagccgc atgaacgtcg gccagatcct
     1621 ggaaactcac ctcggctggg ccgcggcggg tctcggcaag aagatcggcg acatggtcaa
     1681 cggcacgcgc gacgcgtcga tcgcccaggt ccgcaagcag ctccgcgagg tctatggcga
     1741 gaagggctac aaggccgata tcgccgacct cgacgacgag agcacggtcg agctcgccaa
     1801 gaacctaagc accggcgttc cattcgcctc gccggtgttc gacggcgcgc acgaggccga
     1861 catcgtcggc atgctagaga tggccggtct cgacaagtcg gggcaggtca acctggtcga
     1921 cggccgcacc ggcgaggcat tcgatcgcaa ggtgaccgtg ggctacatct acatgctgaa
     1981 gctgcaccat ctcgtggacg acaagatcca cgcccgttcg atcggtccct acagcctggt
     2041 cacccagcag ccgctgggcg gcaaggcgca gttcggcggc cagcgcttcg gcgagatgga
     2101 agtgtgggcg ctcgaggcct atggcgcggc ctacaccctg caggagatcc tcaccgtcaa
     2161 gtcggacgac gttgccggcc gcaccaaggt ctacgaggcc atcgtgcgcg gcgacgacac
     2221 cttcgaggcg ggcatccccg aatccttcaa cgttctggtc aaggagctgc gctcgctcgg
     2281 cctcaacgtc gaactcaacc agtcggccac ctgagggtgg ccgacctctc tactttcgcc
     2341 aatcacgtcc accgaacccc ctaggacaca aagatgaccg acctcatcaa cgtactgggc
     2401 cagccgcagg gcactccgac cttcgacgag atccgcatct cgatcgccag cccggagcgc
     2461 atccgcacct ggagccacgg cgagatcaag aagccggaga ccatcaacta ccgcaccttc
     2521 aagccggagc gggacgggct gttctgcgcc cgcatcttcg gaccgatcaa ggactacgag
     2581 tgcctgtgcg gcaagtacaa gcgcatgaag ttccgcggca tcacctgcga gaagtgcggc
     2641 gtcgaggtga cgctgaccaa ggtgcgccgc gagcgcatgg gccacatcga gctcgcctcg
     2701 ccggtggcgc acatctggtt cctgaagtcg ctgccgagcc gcatcgggct gttgctcgac
     2761 atgaccctgc gcgacctcga acgcattctc tatttcgaga actacgtggt gaccgagccc
     2821 ggcctgacgc cgctcaagta ccgcgagctc ctgaacgagg accagtatct caacgcgctc
     2881 gacgagtacg gcgacgattc gttccgcgcc gacatcggcg ccgaggcgat ccgcgccatg
     2941 ctgcaggtca tcgacctcaa cgaggagcgg ccgcgcctgc gcgaggagct gcgcgagacg
     3001 acctcggaag ccaagcgcaa gaagctggtg aagcgcctca agctctgcga aagcttcatc
     3061 ga
//
LOCUS       DASWGA010000977         6449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2022650, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000977 DASWGA010000000
VERSION     DASWGA010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6449
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2022650"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..818)
                     /locus_tag="VF991_22405"
     CDS             complement(<1..818)
                     /locus_tag="VF991_22405"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX9559261.1"
                     /translation="MANRDFFRRLGLADEVAVSTLAKLKQPKTLRRILLTLGPALALA
                     GGLFAYMAGGRYVSTDNAYVHAGKLTVATDVSGIVANVAVHESQTVEKGQVLFTLDQE
                     PFRIALAGAEANLGTVRNQLITLQATYRQKQTQIAQARTDVAYYETTYQRQQDLLKRG
                     VASQAAFDQAKRDLDAARERVLMAQHDAEATLGQLGGNPDSRIEENAAYLVAQAQVDK
                     AKRDLLRTTVLAPIPGIVTNVDALQVGEYLPAAQAAFSLVSSADVWIEANPKES"
     gene            complement(811..1278)
                     /locus_tag="VF991_22410"
     CDS             complement(811..1278)
                     /locus_tag="VF991_22410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018073683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX9559262.1"
                     /translation="MELPERNIGFLLHDVARLMRKRFEQNARDLGLTRSQCQVLAHLS
                     RHEGIQQGSLAEILEVEPITLTRILDRLEEAGLVERGAHPTDRRVRLLRLTKRAHPML
                     NEIFAIGAITRSEALDGVAEAERDRLFAILASMKANLLGKAASANGDRRASHG"
     gene            complement(1561..1761)
                     /locus_tag="VF991_22415"
     CDS             complement(1561..1761)
                     /locus_tag="VF991_22415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-associated domain-containing
                     protein"
                     /protein_id="HEX9559263.1"
                     /translation="MAQELILKVTGMDCDGCVKAVTRAATGAGTAPISVDLKSGEMRL
                     PEGADLPAITKAIERAGFGVQS"
     gene            1831..2844
                     /gene="trpD"
                     /locus_tag="VF991_22420"
     CDS             1831..2844
                     /gene="trpD"
                     /locus_tag="VF991_22420"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEX9559264.1"
                     /translation="MGDFRGLLAKVGNGETLTADEAERAFDIMTSGDATPAQMGAFLM
                     GLKVRGETAQELAGGARALRAKMHRVTAPDGAIDIVGTGGDHHGTYNVSSCSAFVVAG
                     AGVPVAKHGNRAFTSKSGAADVLAALGIGLELPIEKLEQALVEAKICFLMAPRHHSAM
                     RNVAGPRVELAPSRTIFNLLGPLSNPALVKRQLVGVFDRRWLKPVAEALGQLGLERAL
                     VVHGQDGMDELTTTTKSWAASLEDGKVCEIEIAPEEIGLKRARMAELKGGDAAHNAQA
                     IHKVLAGEKNAFRDIVLLNSAAALMVAGKARDLKAGAALAVQSIDSGRAKAALETLKR
                     ICA"
     gene            2841..3644
                     /gene="trpC"
                     /locus_tag="VF991_22425"
     CDS             2841..3644
                     /gene="trpC"
                     /locus_tag="VF991_22425"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019966283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEX9559265.1"
                     /translation="MSGDTLDKIIADKRRHVAGRMSHRPLRMVEALARDNDSPRGFAK
                     ALKAAIAAGRYGLIAEIKKASPSKGLIRADFDPPALARAYERGGATCLSILTDGPYFQ
                     GKDEFLTQARQVTKLPVLRKDFMIDPYQVPEARALGADCILLIMACLDDRLAAELTKL
                     AHKWGMDVLVEVHDAAELERALKIDSDLIGVNNRNLKTLAVDLATTEQLAPLVPKDRV
                     VVAESGLGSPADLLRMAKVGASAFLIGESFMRKPDVEAAVRALLEREAA"
     gene            3641..4123
                     /gene="moaC"
                     /locus_tag="VF991_22430"
     CDS             3641..4123
                     /gene="moaC"
                     /locus_tag="VF991_22430"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEX9559266.1"
                     /translation="MSKKALTHFDEAGNARMVDVGAKDITERVAVARASVTMQAATLK
                     LIRDKKAAKGDVLAVAQLAGIMAAKKTPDLIPLCHPLALSSVDVQLTLDAKRNAVDIE
                     ATCKLKGRTGVEMEALTAASVAALTVYDMCKSVDRGMVISDIRLLHKSGGKSGTYEAR
                     "
     gene            4236..5450
                     /gene="glp"
                     /locus_tag="VF991_22435"
     CDS             4236..5450
                     /gene="glp"
                     /locus_tag="VF991_22435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEX9559267.1"
                     /translation="MLSVRDAHARVIAAFEALPAETVSVAEAAGRVLAQSPQARLTQP
                     PADLSAMDGYAVRAEDVPAAPTTLTLVGQAPAGGSYDHALKPGETVRIFTGAPLPMGA
                     DAIVIQEDTKADGKKITILEAPRIGRHIRKAGLDFAAGDRPFTAGRRLTTRDVALAAA
                     MNLPWLSVHRKPRVAILSTGDELVMPGEPIGRNQIVSSSGIAVAALVRGWGGEPTLFD
                     IARDDAKLIEDRIAAGAQHDLLITLGGASVGDHDLVQAALKSLGFTMDFWRIAMRPGK
                     PLMFAAKERARVLGLPGNPVSTMVCALMFLKPALDRMLGQPGDLVATEPARLAVDLKA
                     NDTREDYVRSKLTRSPDGGLTVEPHPVQDSSMLSVLAWSSGLLVRPAHDPARKAGEVV
                     QVIDLSVLSGGY"
     gene            5570..6310
                     /gene="lexA"
                     /locus_tag="VF991_22440"
     CDS             5570..6310
                     /gene="lexA"
                     /locus_tag="VF991_22440"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003528303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEX9559268.1"
                     /translation="MLTRKQNELLMFINKRLNDDGVSPSFDEMKDALRLKSKSGIHRL
                     ITGLEERGFLRRLPHRARALQVLKLPDAAAMPALNVTPLLARAGFAEGREGFVPQVIR
                     GERVPLAGAIQVANEAQALSLPLYGRIAAGTPIEALRDNSTTVDVPVTLLGSGAHYCL
                     EVQGDSMVEAGIQNGDIAIIKSADTAESGEIVVALIDDTEATLKRLRKKGASIALEPA
                     NAAYETRIFGPDRVKIQGRLAGLYRRYN"
BASE COUNT         1059 a         2226 c         2129 g         1035 t
ORIGIN      
        1 tcggactcct tggggttggc ctcgatccac acgtcggccg aggagaccag gctgaacgcc
       61 gcctgcgccg ccggcaggta ctcgccgacc tgcagcgcat cgacgttggt gacgatgccg
      121 gggatcggcg ccagcacggt cgtgcgtaaa aggtcgcgct tggccttgtc gacctgcgct
      181 tgcgcgacga gataggcggc attctcctcg atgcgcgaat cggggttgcc gccgagctgg
      241 cccagggtcg cttcggcgtc gtgctgcgcc atcagcacgc gctcgcgcgc cgcgtcgagg
      301 tcgcgcttgg cctggtcgaa cgccgcctgc gaggcgacgc cgcgcttcag cagatcctgc
      361 tggcgctggt aggtcgtctc gtaataggcg acgtcggtcc tggcctgcgc gatctgcgtc
      421 tgcttctggc gataggtcgc ctgcagggtg atgagctggt tgcgcaccgt gccgagattg
      481 gcctcggcgc cggccagcgc gatcctaaac ggctcctggt cgagggtgaa cagcacctgc
      541 cccttctcga ccgtctggct ttcgtgcacg gccacgttgg cgacgatgcc cgagacgtcg
      601 gtggcgacgg tgagtttgcc ggcatggaca taggcgttgt cggtcgacac gtagcggccg
      661 cccgccatgt aggcgaacag gccgcccgcc agcgcgagcg caggcccgag cgtcagcagg
      721 atgcgccgca gcgtcttggg ctgtttcagc ttggcgagag tagatacggc gacctcatcg
      781 gcgaggccga gccgccggaa gaagtcccgg ttagccatgg cttgctctcc tgtcgccgtt
      841 tgcgcttgcg gcctttccga gaaggttggc cttcatgctg gcgaggatcg cgaacaggcg
      901 atcgcgttcc gcctcggcca ccccatccag cgcctcgctg cgggtaatcg ccccgatggc
      961 gaagatttcg ttcagcatcg ggtgcgccct tttggtgaga cgcagcagcc ggacgcgacg
     1021 gtcggtggga tgggcgcccc gctcgaccag acccgcctcc tccaggcggt cgaggatgcg
     1081 ggtcaaggtg atcggctcga cctcgaggat ctcggccagg ctgccctgct ggatgccttc
     1141 atggcgcgac aggtgcgcca gcacctggca ctgcgagcgc gtcagcccca ggtcgcgcgc
     1201 attctgctcg aagcgcttgc gcatcaggcg ggccacgtcg tgcagcagga agccgatatt
     1261 gcgttcaggc agttccatat cgatctccta agcacactta atataagctt gcttagtatc
     1321 tttgcaagac tatcgctgtg gaacccctaa ccccttgaaa ataatcaact taaagcgcga
     1381 cgggccgtaa ctcgccgcgc gtatttccaa atttgtggaa gtacccaaaa gaggcccaac
     1441 ggtgcgtact tattccggct gccattgccg atgtttaagg gcgcaaacct tggccgccgc
     1501 ggtcggccgg caaggccgcg tcgcttggcg cggcgtcgct ccgccttggt cggagagccc
     1561 ctaggactgg acgccgaagc cggcgcgctc gatcgccttg gtgatggcgg gcaggtcggc
     1621 gccttccggc aggcgcattt cgccgctctt gagatcgacc gagatcggcg cggtgccggc
     1681 gcccgtggcg gcccgggtga cggctttgac gcagccgtcg caatccatgc cggtgacctt
     1741 gaggatgagt tcttgagcca tgtgatatag ctacccgcgc accggcccgg ccggcaagcg
     1801 gcaaaaaatg gggatttggt gagcggcgac atcggcgatt ttcgtggtct tttggccaag
     1861 gtcggcaacg gcgagacgct gaccgccgac gaggccgagc gcgccttcga catcatgacc
     1921 tcgggcgatg ccaccccggc ccagatgggc gccttcctga tgggcctgaa ggtgcggggc
     1981 gagaccgccc aggagctggc cggcggcgcc cgcgcgctgc gcgccaagat gcaccgggtc
     2041 acggcacccg acggcgccat cgacatcgtc ggcacaggcg gtgaccacca cggcacctac
     2101 aacgtctcgt cgtgctcggc cttcgtcgtc gccggcgccg gcgtgccagt cgccaagcac
     2161 ggcaaccgcg ccttcacctc caagtcgggc gccgccgacg tgctggccgc cctcggcatc
     2221 ggcctggaac tgccgatcga aaagctcgag caggcgctgg tcgaagccaa gatctgcttc
     2281 ctgatggcgc cgcgccatca cagcgccatg cgcaatgtcg ccggcccccg ggtcgagctg
     2341 gcgcccagcc gcaccatctt caatctcctg ggcccgctgt cgaaccccgc cctggtcaag
     2401 cgccagctcg tcggcgtgtt cgaccggcgc tggctaaaac ccgtcgccga ggcgctgggc
     2461 cagttggggc tggagcgtgc cctggtcgtg cacggccagg acggcatgga cgagctcacg
     2521 accacgacca aaagctgggc cgcctcgctg gaggacggca aggtctgcga gatcgagatc
     2581 gcgccggagg agatcggcct caagcgcgcc cggatggccg agctcaaggg cggcgatgcc
     2641 gcgcacaacg cccaagccat ccacaaggtc ctcgccggcg agaagaacgc cttccgcgac
     2701 atcgtgctgc tgaacagcgc cgcggccttg atggtcgccg gcaaggcgcg cgacttgaag
     2761 gcgggcgccg cgctcgccgt ccaatcgatc gactcggggc gcgccaaggc cgcgctcgaa
     2821 accctgaaga ggatctgcgc atgagcggcg atacgttgga caagatcatc gccgacaagc
     2881 gcaggcatgt cgccggccgc atgtcgcatc ggccgttgcg catggtcgaa gccctggcgc
     2941 gcgacaacga ttcgccgcgc ggcttcgcca aggcgctcaa ggctgcgatc gccgcgggcc
     3001 gctacgggct gatcgccgag atcaagaagg cgtcgcccag caagggcctg atccgcgccg
     3061 acttcgatcc tcccgccctc gcccgcgcct acgaacgcgg cggcgccacc tgcctctcga
     3121 tcctgaccga cggcccctac ttccagggca aggacgaatt tttgacccag gcgcgccagg
     3181 tgaccaagct gccggtgctg cgcaaggatt tcatgatcga tccctaccag gtgcccgagg
     3241 cgcgggcgct gggggcggac tgcatcctgc tgatcatggc ctgcctcgac gataggctgg
     3301 ctgccgagct gacgaagctc gcgcacaaat ggggcatgga cgtcctggtc gaggtccacg
     3361 acgcggccga gctcgagcgc gcgctgaaaa tcgacagcga tcttataggc gtgaacaacc
     3421 gcaacctgaa aaccctcgcc gtcgacctcg ccacgaccga gcagcttgcg cccctggtgc
     3481 caaaagaccg cgtggtggtg gcggagagcg ggctgggctc gcccgccgac cttttgcgca
     3541 tggccaaggt cggcgcctcg gcgttcctga tcggcgagag tttcatgcgt aagcccgacg
     3601 tcgaggccgc cgtgcgcgcg ctgctcgagc gcgaggcggc atgagcaaga aggcgctcac
     3661 gcatttcgac gaggccggca acgcccgcat ggtcgatgtc ggcgccaagg acatcaccga
     3721 gcgggtggcg gtggcgcgcg ccagcgtcac catgcaggcc gccacgctaa agctcatccg
     3781 ggacaagaag gccgccaagg gcgatgtcct ggccgtggcc cagcttgccg gcatcatggc
     3841 ggccaagaag acgcccgacc tgatcccgct ctgccatcct ctggcgctga gttcggtgga
     3901 cgtgcagctc accctcgacg ccaagcgcaa tgccgtcgat atcgaggcga cctgcaagct
     3961 caagggccgc accggcgtcg aaatggaggc gctgaccgcc gcctcggtgg ccgcgctcac
     4021 cgtctacgac atgtgcaagt cggtcgaccg cggcatggtg atttccgaca tccgcctcct
     4081 acataagtca ggcggcaagt ccgggaccta cgaggctcgg tgatgctacg cgcacattgt
     4141 catcccgagc gcagcgaggg acctttcctg cagcctcaaa ggtccctcgg ccttcggcct
     4201 cgggatgaca gcacctttga tgcggacaac ttctgatgct ctccgttcgc gatgcccacg
     4261 cccgcgtgat cgcggcgttc gaggccttgc cggccgagac ggtctcggtg gccgaggcgg
     4321 ccgggcgcgt gctggcccag tcgccacaag cgcgtctgac ccagccgccc gccgacctct
     4381 cggcgatgga cggctacgcc gtgcgcgccg aggacgtccc ggcggcgccg acgacgctca
     4441 cgctggtcgg ccaggcgccc gccggcggct cctacgacca cgcactgaag cccggcgaga
     4501 cggtgcgcat cttcaccggc gcgccgctgc cgatgggcgc cgatgcgatc gtcatccagg
     4561 aggacaccaa ggctgacggc aagaagatca ccatcctcga ggcaccgcgc atcggccgcc
     4621 acatccgcaa ggccgggctc gacttcgccg ccggcgaccg gccgttcacg gcaggccgca
     4681 ggctgaccac gcgcgacgtg gcgctggccg ccgccatgaa cctgccctgg ctgtcggtgc
     4741 atcgaaagcc gcgcgtcgcc atcctctcga ccggcgacga gctggtgatg ccgggcgagc
     4801 cgatcggccg caaccagatc gtctcgtcct caggcatcgc cgtggcggcg ctggtgcgcg
     4861 gctggggcgg cgagcccacc ctgttcgaca tcgcccgcga cgatgccaag ctgatcgagg
     4921 accgcatcgc cgccggcgcg cagcacgacc ttttgatcac cttgggcggc gcctcggtcg
     4981 gcgaccacga tctcgtccag gccgcgctca agtcgctggg cttcaccatg gatttctggc
     5041 gcatcgccat gcggccggga aagcccttga tgttcgccgc caaggagcgc gcccgcgtgc
     5101 tcggcctgcc gggcaatccg gtctcgacca tggtctgcgc gctgatgttc ctgaagcccg
     5161 cgctcgaccg catgctgggc cagcccggcg accttgtagc caccgagccg gcgcggctgg
     5221 ccgtcgacct caaggcgaac gacacgcgcg aagactatgt ccgctccaag ctgacgcgga
     5281 gccccgacgg cggcctgacc gtcgagccgc atccggtgca ggacagctcc atgctctcgg
     5341 tactggcctg gtcgtccggc ctgctagtgc ggccggccca cgaccctgcc cgcaaggccg
     5401 gcgaggtcgt ccaggtcatc gatctttctg ttctttccgg gggttactga tcccgacgtc
     5461 atccccaagt ccctcgggaa aacttgaccg cgggccagaa ctaaactaga acaagcgtcg
     5521 ggtttcagga tttgttccga aatctgctag gcgttctggg gagaagacgg tgctaacccg
     5581 caagcaaaac gaactcctga tgttcatcaa caagcgcctc aacgacgacg gcgtctcgcc
     5641 gtcgttcgac gagatgaaag atgcgctgcg gctcaaatca aaatcgggca tccatcggct
     5701 gatcaccggc ctggaggagc gcggcttcct gcgccgcctg ccgcatcgcg cgcgggctct
     5761 gcaggttctg aaactgcccg acgccgcagc gatgcccgca ctcaatgtca cgccgctgct
     5821 cgcccgtgcc ggtttcgccg agggccgcga aggcttcgtg ccgcaggtca tccgcggcga
     5881 gcgcgtgccg ctggccggcg ccatccaggt cgccaacgag gcgcaggcgc tcagcctgcc
     5941 gctctatggc cggatcgccg ccggcacgcc gatcgaggcg ctgcgcgaca actcaacgac
     6001 cgtcgacgtg cccgtcaccc tactcggctc gggcgcgcac tattgcctcg aggtacaggg
     6061 cgattcgatg gtcgaggccg gcatccagaa cggcgacatc gccatcatca agagcgccga
     6121 caccgccgag tcgggcgaaa tcgtcgtggc gttgattgac gacaccgagg ccaccttgaa
     6181 gcgcctgcgc aagaagggcg cctcgatcgc actcgagccg gccaacgccg cctacgagac
     6241 gcgcatcttc ggaccagacc gcgtcaagat ccagggtcgc ctggccggac tctaccgccg
     6301 ctacaattaa gcgcccgact actggcccgt gcaggctttt agctgggccg tgcgcgcgat
     6361 gtgtcggtca aatgcccggc gctttcactt gcgccgcctg ccgcgtcgag ctgttgggca
     6421 cccagggacg gtcgccgcga cggccgttg
//
LOCUS       DASWGA010000978         2385 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1512387, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000978 DASWGA010000000
VERSION     DASWGA010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2385
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512387"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..178)
                     /locus_tag="VF991_22445"
     CDS             complement(<1..178)
                     /locus_tag="VF991_22445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX9559269.1"
                     /translation="MGDRPLVLVAAVALVDVDGRVLIAQRPAGKAMAGLWEFPGGKVD
                     PGETPEEALVRELHE"
     gene            complement(220..1458)
                     /gene="argJ"
                     /locus_tag="VF991_22450"
     CDS             complement(220..1458)
                     /gene="argJ"
                     /locus_tag="VF991_22450"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEX9559270.1"
                     /translation="MAVKHAQSPLAPKMTPTLPRVAGVKLAAARSGGRYKDRDDVMLV
                     VVPAGAAIAGVLTRSKTSSAPVDWCRKNLARGKVRAIVANAGNANAFTGKAGDKAVEE
                     STRAIAQALGCPRNEVFMASTGVIGQPLDWEKIAAVVPSLIKSAREDGWSAAAAAIMT
                     TDTFPKLATRQAKIGERTVSINGFLKGSGMIAPDMATMLAFVFTDAKVPSGVLQKLVA
                     DAADKSLNCVTVDGDTSTSDTLLVVATGAARHAPIEEADDPVLVDFKRALDEVLIDLA
                     QLLARDGEGATKFVTINVGGASSNGAARKIGLSVANSPLVKTAIAGEDANWGRIVMAV
                     GKSGERADRDKLRISIGGVRITDGGQVVPHYDETPVVKHIKGTDIVIDIDLGIGRGRA
                     TVWTCDLTHGYIDINGSYRS"
     gene            complement(1543..>2385)
                     /locus_tag="VF991_22455"
     CDS             complement(1543..>2385)
                     /locus_tag="VF991_22455"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX9559271.1"
                     /translation="QAAQPLKDPIVATVNGQPVRLSELEVAQQALPQQYRNMPLQAVF
                     PALLDRIIDSKLVVQEGKKTKVSDDPAFKKRMAFVEDQVLQDFWIQREVARKVTPEKL
                     QQRYEERLKSMPSEEEVHARHILVSTEDEAKAIIADLKKGTAFDKLAKEKSTDKASGA
                     EGGDLGWFKKSDMVKEFADAAFALKKDELTETPVKTQFGYHVIKLEDRRKAPPPAFEE
                     MADQLREEMAREVVTAQLDQLRSGAKIEKFTMDGGKPDAAPAKPATPPAPPAPARPPA
                     TPGK"
BASE COUNT          342 a          819 c          801 g          423 t
ORIGIN      
        1 cctcatgcag ttcgcgcacc agcgcctctt cgggagtctc gccgggatcg accttgccgc
       61 cgggaaattc ccaaagcccg gccatcgcct tgccggcggg ccgctgggcg atcaggacgc
      121 gcccatcgac atcgaccagc gccaccgcgg cgaccagcac gagcggccgg tcacccagcg
      181 gcggcgggcc ccccgggcac tcctggtcaa acgcggcact caagaacgat agctgccgtt
      241 gatgtcgatg tagccgtgcg tcagatcgca ggtccagaca gtggcgcggc cgcggccgat
      301 gccgagatcg atgtcgatga cgatgtcggt gcccttgatg tgcttgacca ccggcgtctc
      361 gtcatagtgg ggcacgacct ggccgccgtc ggtgatgcgc acgccgccga tcgagatccg
      421 gagcttgtcg cggtcggcgc gctcgcccga cttgccgacc gccatgacga tgcggcccca
      481 gttggcgtct tcgccggcga tcgcggtctt gaccagcggc gaattggcga ccgagagccc
      541 gatcttgcgc gccgcgccgt tcgacgaggc gccgccgaca ttgatggtca cgaacttggt
      601 ggcgccctcg ccgtctcgcg ccagaagctg cgccaggtcg atcagcacct cgtcgagggc
      661 gcgcttgaaa tcgaccagga cggggtcgtc cgcctcctcg atcggcgcgt ggcgggccgc
      721 gccggtggcg accaccaaga gcgtgtcgct ggtcgaggtg tcgccgtcga cggtgacgca
      781 gttcagcgac ttgtcggcgg catcggccac cagcttctgc agcacgccgc tcggcacctt
      841 ggcatcggtg aagacgaagg ccagcatggt ggccatatcg ggcgcgatca tgcccgatcc
      901 cttgaggaag ccattgatgg aaacggtcct ctcgccgatc ttggcctggc gcgtggcgag
      961 cttggggaaa gtgtcggtgg tcatgatcgc ggcggccgcc gccgaccagc catcctcgcg
     1021 cgccgacttg atgaggctgg gcacgacggc ggcgatcttc tcccagtcga gcggctggcc
     1081 gatcacgccg gtcgaggcca tgaacacttc gttgcgcgga cagcccagcg cctgggcaat
     1141 ggcgcgcgtg ctctcctcga ccgccttgtc gccggccttg ccggtgaagg cattggcgtt
     1201 gccggcattg gcgacgatgg cgcgcacctt gccgcgggcc aggttcttgc ggcaccagtc
     1261 gaccggcgcc gacgatgtct tggagcgcgt cagcacgccg gcgatcgcgg cgcccgccgg
     1321 caccaccacc agcatcacgt catcgcggtc cttgtagcgc ccgcccgatc gagcagccgc
     1381 cagcttgacg ccggcgacgc gcggcagcgt cggcgtcatc ttcggcgcga gcggcgattg
     1441 ggcgtgcttg acagccatga gactcccctt gcggacgacc gagcaacacc cggtcgctcc
     1501 gaacggggga gcctacacca gaaacgccca aaaacgtgag ttttacttgc caggcgtggc
     1561 cggtggacgc gccggcgctg gcggagccgg cggcgtggcc ggcttggccg gcgcggcgtc
     1621 gggcttgccg ccatccatgg tgaacttctc gatcttggcg ccggaacgca gctggtcgag
     1681 ctgcgccgtc acgacctcgc gggccatttc ctcgcgcagc tgatcggcca tctcctcgaa
     1741 cgccggcggc ggcgccttgc ggcggtcctc gagcttgatg acgtggtagc cgaactgcgt
     1801 cttgaccggc gtctcggtga gctcgtcctt cttgagcgca aaggccgcgt cggcgaactc
     1861 tttcaccatg tccgacttct tgaaccagcc gaggtcgccg ccctccgcgc cggacgcctt
     1921 gtcggtcgac ttctccttgg cgagcttgtc gaaggcggta cccttcttga ggtcggcgat
     1981 gatcgccttg gcctcgtcct cggtcgatac caggatgtga cgcgcgtgca cctcctcctc
     2041 cgatggcatc gacttcagcc gctcctcgta acgctgctgc agcttctcgg gcgtgacctt
     2101 gcgcgccact tcgcgctgga tccagaaatc ctgcagcacc tggtcctcga cgaaggccat
     2161 gcgcttcttg aaggccgggt cgtcgctgac cttggtcttc ttgccttcct ggaccaccag
     2221 cttgctgtcg atgatgcggt cgagcagggc gggaaacacc gcctgcagcg gcatgttgcg
     2281 gtattgttgc ggcagcgcct gctgggcgac ctcgagttcc gacaaccgca cgggctggcc
     2341 gttgaccgtg gcgacgatcg ggtccttgag cggctgggcc gcttg
//
LOCUS       DASWGA010000979         2227 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_755111, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000979 DASWGA010000000
VERSION     DASWGA010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2227
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_755111"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VF991_22460"
     CDS             complement(<1..296)
                     /locus_tag="VF991_22460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559272.1"
                     /translation="MTAPLTGYADRISVRAGEKIAFKVSSAGPGPYNAMLVRIIRGDP
                     NPGGLPPKLEDQSELFDARFASRQQHAWPGSYALVEKAKDVTLPAALAVEALIWP"
     gene            419..1462
                     /locus_tag="VF991_22465"
     CDS             419..1462
                     /locus_tag="VF991_22465"
                     /inference="COORDINATES: protein motif:HMM:NF014212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559273.1"
                     /translation="MSPGDLKGKIQTVLGPIAPETLGRTLMHEHVLCDIRPPGTRSDN
                     DLGPEITLENVWQINYGRGLKRAGRKYMLDLEDIATREVRMMKHQGGDAIVELTCGGL
                     SPDPNGLRRIAAGTGVHLIMGCGYYVNDYQDPRNHARTVDDFAAEMVGQILDGAWGTD
                     VRAGMIGEIGCQAPWTDTEKKVMQAALIAAAETGAAINVHPGRAPDQPQEVADFIKTA
                     GRSTERAVVSHIDRTIFDEQRLLRLADTGVTIEFDLFGQEASYYGLSNIDMPNDATRL
                     KLIRALIDRGHLDRVVISHDICYRTRLASFGGHGYGHIFRNVVPMMKERGYSEDEIDA
                     ILVRNPRRLLTFA"
     gene            complement(1468..2163)
                     /locus_tag="VF991_22470"
     CDS             complement(1468..2163)
                     /locus_tag="VF991_22470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX9559274.1"
                     /translation="MKPHVICHMVSSIDGRILSSRMRPKGANSGSLFERLHDELKGDA
                     WLIGRVTGREFAKQESYPATAGQAFAREHWFARRDAAAWGIALDRHGKIAWGRSDIGG
                     DPIVVVLSEQVSDVHLAGLRSEQVSYIFAGKHEIDLALALEILNRELGIKRLLLEGGG
                     GSNGAFLRAGLVDEISLAILPAVDGSKGAPSVFDSSEKEAGMPAPIESMTLQSSQVLD
                     GGAVWLRYQLRNG"
BASE COUNT          403 a          748 c          722 g          354 t
ORIGIN      
        1 ggccagatca gcgcctcgac ggcgagtgcc gccggcagcg tcacgtcttt tgccttctcc
       61 accagcgcat aggagccggg ccaggcgtgc tgctggcgcg aggcgaagcg ggcatcgaac
      121 agttcggatt ggtcttcgag cttgggcggc aatccgccgg gattgggatc gccgcggatg
      181 atgcgcacca gcatggcgtt gtagggccca gggcctgcgc tcgagacctt gaaggcgatc
      241 ttttcgccgg cccggaccga gatgcggtcg gcatagccgg tcagcggtgc tgtcacgttt
      301 gtctcccctc cagccgccga tatagtcgcc caaggagagg gaggaacgcc atgaccaaga
      361 tgatgcgccg ccgcactgcg atggcgggcg cgcttgttgc ccccatgctg gagctgcaat
      421 gagccctggc gacctgaagg gaaagatcca gaccgtgttg gggccgatcg cgcccgaaac
      481 gctcggccgc acgctgatgc acgagcacgt gctgtgcgac atccgtccgc ccgggacgcg
      541 ctcggacaac gatctcgggc ccgagatcac gctcgagaat gtctggcaga tcaattacgg
      601 ccgcgggctg aagcgcgccg gccgcaagta catgctcgac ctcgaggaca tcgccacccg
      661 cgaggtgcgc atgatgaagc accagggcgg cgacgccatc gtcgaactca cgtgcggcgg
      721 tctctcgccc gatccaaacg gcctccggcg cattgccgcc ggcacgggcg tgcacctgat
      781 catgggctgc ggctattacg tcaacgacta ccaggacccg cgcaatcacg cgcgcaccgt
      841 cgacgatttc gccgccgaga tggtgggcca gatcctcgac ggcgcctggg gcaccgatgt
      901 ccgcgccggc atgatcggcg agatcggctg ccaggcgccg tggaccgaca ccgagaagaa
      961 ggtgatgcaa gccgcgctca ttgccgcggc ggagacggga gcggcgatca acgtccatcc
     1021 cggccgcgct cccgaccagc cgcaggaggt cgccgacttc atcaagacgg cgggccgatc
     1081 caccgagcgc gccgtcgtca gccacatcga ccgcaccatc ttcgacgagc aacggctgct
     1141 gcggctggcc gatacaggcg tcaccatcga gttcgacctg ttcggccagg aggcgagcta
     1201 ttacgggctg tccaacatcg acatgccgaa tgacgcgacg cggctgaaac tgatccgcgc
     1261 cctgatcgat cgcggccatc tcgatcgggt cgtgatcagc cacgacatct gctaccgcac
     1321 ccgcctcgcc agcttcggcg gccacggcta cggccatatc ttcaggaacg tcgtgcccat
     1381 gatgaaggag cgcggctaca gcgaagacga gatcgacgcc atcctggtgc gcaatccgcg
     1441 gcggctgctg acgttcgcct aggagagcta tccgttgcga agctggtagc gcagccagac
     1501 cgcgccgccg tccagcactt ggctgctttg caacgtcatg gattcgatcg gcgcgggcat
     1561 gccggcctct ttttcgctgg aatcgaagac gctcggcgca cccttggagc catcgacggc
     1621 cgggaggatc gccaaactga tttcatcgac gaggccggcg cgcaggaaag cgccgttcga
     1681 gccgccgccg ccttccagca acaggcgctt gatcccgagc tcccggttaa ggatctccag
     1741 cgccagcgcg agatcgatct cgtgcttgcc ggcgaagatg taggacacct gctcggagcg
     1801 aagacccgcg agatggacgt ccgagacctg ctccgacagc accacgacga ttggatcgcc
     1861 gccgatgtcg gagcggcccc aggcgatctt gccgtgccga tcgagagcga tcccccaggc
     1921 ggccgcgtcg cgccgtgcga accagtgttc gcgcgcaaac gcctggccag ccgtcgccgg
     1981 ataagactcc tgcttggcga attcgcggcc ggtcacgcgg ccgatcagcc aggcatcgcc
     2041 cttgagctcg tcgtgcagac gctcgaacag gctacccgag ttggcgccct tcggccgcat
     2101 gcggctcgac aggatgcggc cgtcgatgct cgagaccatg tggcagatca cgtgaggttt
     2161 catcgatgtc ctctatgaac agtacttgtc gcacacgcag ccttcgccgg tgcaacccgc
     2221 ggagatt
//
LOCUS       DASWGA010000980         1768 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1638178, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000980 DASWGA010000000
VERSION     DASWGA010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1638178"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VF991_22475"
     CDS             complement(<1..737)
                     /locus_tag="VF991_22475"
                     /inference="COORDINATES: protein motif:HMM:NF014766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX9559275.1"
                     /translation="MKIARIDSHSIKVPFTFGGNPTGYGGRNWTTNNILLVRVETDNG
                     LVGWGEAFCYGCTDAVRAALHHMIAPIAVGQDAGDIARLSYDLQQKLHLFGRYGLTIF
                     ALSGLDIALWDIAGKAANLPLHRLLGGAGRERLPAYASLLKYRDPEKVAARTKQAVQQ
                     GYRHIKLHETEEAEVKAARLAAGDDVAIMVDTNCPWTPEQARHMTLKLRRYDLHWLEE
                     PIFPPEDFSALARLRAGTGVALAAGEN"
     gene            complement(734..1273)
                     /locus_tag="VF991_22480"
     CDS             complement(734..1273)
                     /locus_tag="VF991_22480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEX9559276.1"
                     /translation="MPIENERKFVLDDDGKLETLLAQVPGVTRSLLQQAYLDVSGLRI
                     RAVEGGGARRHIFTYKREVDGQVVEIETEISAADFGRLWSQRRETLQKARYSWDDGRF
                     HWDVDFFKTDEGRTYFAQAEVEMPEQQRSPPPLPECLAGHLLATAPAGDQRFTSKRLA
                     DQVHAEKLLADIRRKGRVE"
     gene            1288..>1768
                     /locus_tag="VF991_22485"
     CDS             1288..>1768
                     /locus_tag="VF991_22485"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX9559277.1"
                     /translation="MSSQTIDDLPTPALILDRAILSRNLKRMSDRLRNAGVMLRPHLK
                     TAKSIEVGRKAVEGHDGRITVSTLAEARYFAKGGFTDILYGVGVVPSKLPAIAELRRQ
                     GVNLRMVTDNLAVARAIAAAATNGDSFSVLIEIDSGAGRAGLPYRELPGLLDIARVLH
                     "
BASE COUNT          269 a          623 c          576 g          300 t
ORIGIN      
        1 ttgttctcgc ccgccgccag cgccacgccg gtgccggcgc gcagccgcgc cagggccgaa
       61 aaatcctcgg gcggaaagat cggctcctcg agccagtgga gatcgtagcg gcgtagcttc
      121 agggtcatgt gccgcgcctg ctcgggcgtc cacgggcagt tggtgtcgac catgatggcc
      181 acgtcgtcgc ccgccgcgag ccgtgccgcc ttcacctccg cctcctcggt ctcatgcagc
      241 ttgatgtggc gatagccctg ctggaccgcc tgcttggtgc gcgccgccac tttctcggga
      301 tcgcgatact tcagcaggct ggcataggcc ggcaggcgct cgcgcccggc cccgccgagc
      361 agccgatgca gcggcaagtt ggctgccttg ccggcgatgt cccacagcgc gatgtcgagg
      421 cccgacagcg cgaagatggt gaggccgtaa cggccgaaca aatgcagctt ctgctgcagg
      481 tcgtaggaga gccgcgcgat gtcgccggcg tcctggccga ccgcgatcgg cgcgatcatg
      541 tgatgcagcg cggcgcgcac cgcgtcggtg cagccgtagc agaacgcctc gccccagccg
      601 accaggccat tgtcggtctc gacccgcacc agcaggatgt tgttggtcgt ccagttgcgc
      661 ccgccatagc ccgtcggatt gccgccgaag gtgaacggca ccttgatcga atggctgtcg
      721 atgcgcgcga tcttcactcg acccttccct tccggcggat gtcggccagc agtttctcgg
      781 cgtgcacctg gtcggcgagc cgcttggagg tgaaacgctg gtcgccggcc ggcgccgtcg
      841 ccagcaggtg gccggccagg cactcgggca gcggcggcgg cgatctctgc tgttccggca
      901 tctcgacctc ggcctgggcg aaataggtgc ggccctcgtc ggtcttgaag aaatcgacgt
      961 cccagtggaa ccggccgtcg tcccacgagt accgcgcctt ctgcagggtc tcgcgccgtt
     1021 gcgaccacag ccggccgaaa tcggcggcgc tgatctcggt ctcgatctcg accacctggc
     1081 cgtcgacctc gcgcttgtag gtaaagatgt gacgcctggc tccgccgccc tccacggcgc
     1141 ggatgcgcag gccggacacg tcgagatagg cctgctgcag caggctccgc gtcacgccgg
     1201 gaacttgcgc cagcagcgtc tcgagcttgc cgtcgtcgtc cagcacaaac ttgcgctcat
     1261 tctcgatcgg catgttagaa tcgcaccatg tccagccaga caatcgacga cctgccgacg
     1321 cctgcgctca ttctcgaccg ggcgatcctg agccgcaacc tcaagcgcat gagcgatcgc
     1381 ctgcgtaacg ctggcgtcat gctgcggccg catctcaaga cggccaaatc gatcgaggtc
     1441 ggccgcaagg cggtcgaggg ccatgacggg cgcattaccg tgtcgaccct ggccgaggcg
     1501 cgctatttcg ccaagggcgg cttcaccgac atcctctatg gcgtgggcgt cgtgccgtcc
     1561 aagctgccgg ccatcgccga gctgcgccgc caaggcgtca acctgcggat ggtgacggac
     1621 aatctcgccg tcgcccgggc gatcgccgcc gcggcgacca acggcgatag cttctcggtg
     1681 ctgatcgaga tcgacagcgg cgccggccgc gccggcctgc cttaccgcga actgcccggc
     1741 ctcctcgata tcgcccgtgt cttgcaca
//
LOCUS       DASWGA010000981         4416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1887151, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000981 DASWGA010000000
VERSION     DASWGA010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4416
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1887151"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VF991_22490"
     CDS             <1..283
                     /locus_tag="VF991_22490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkanesulfonate monooxygenase"
                     /protein_id="HEX9559278.1"
                     /translation="SARRLLDFAAAGETHDERLWMPIAEATGAMGNTSCLVGTAEQVA
                     RALLEYYKLGIHSFLIRGFDPFEDTVDFGRELIPRLRAGAEELDRAKAA"
     gene            complement(382..2112)
                     /locus_tag="VF991_22495"
     CDS             complement(382..2112)
                     /locus_tag="VF991_22495"
                     /inference="COORDINATES: protein motif:HMM:NF017775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEX9559279.1"
                     /translation="MKRVGSFIGDWWHLVIPYFKSEEWPIAIPLLIGAIALTFSGVGL
                     EVLFNEWNRRFYDSIQNKDEAVFWQEIIFFSWLAAMFIAVFVARAIVSPYLRLRWRRW
                     LTRYYLAHWLDGRGYYRIELQRTVDNADQRIAEDLRQLGEYTMTLMLGLLGAVATLIS
                     FLFILWTLSGPLSLAAIGLDVTIPGYMAWVCLIYAIVGTFLANIVGRRLIPLNFQKQR
                     FEANFRFSLVRVRENAEGIALYRGEQREADQLNARFADVFANGWRVLFTQAQLAFYQS
                     GYAQLAIIFPYVVTAPRFFAGAITFGVMTQTASAFGQVQSALSFFVDNYTSLAELRAV
                     MDRLRGLQAATDAKPESAIDLVPDADRTDVGALDLTLGLPNGQALLRDATLILPQGRS
                     TLITGASGSGKSTLFRALAGIWPFGKGHVHVPAGARVLFLPQKPYIPIATLSDAVKYP
                     DEQSKASDGEIVAALEATQLGHLAGRLKEVEHWANTLSGGEQQRLAVARALVFKPDWL
                     FLDEATASLDEAMEAAIYDELKRRLPATTIVSIGHRPSLRRWHDRRIELQRKPGEEGR
                     LVEATAASPA"
     gene            2292..3560
                     /locus_tag="VF991_22500"
     CDS             2292..3560
                     /locus_tag="VF991_22500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase/deacetylase family
                     metallohydrolase"
                     /protein_id="HEX9559280.1"
                     /translation="MDDVTRRRLLQGTGAAIAAVGLLDEAAARTAAFGPADPYDLVIR
                     GGEVLDPSQGLRGRRDIGIRNAAIAAVEPEIAAERGTQAFDAAGQLVLPGLIDFHAHV
                     LPGGGIGLSGDELVPYTGTTTYVSAGDAGVGSFSAFKHFGIAQSRTRILAFLHISSIG
                     LSGFPVGEMLNIDHARVDAAAKMLAENPDVLLGIKVRESLDVVGNNGLEPLKRAIAAT
                     ERSGVEGARVMCHIGNAPGNLSELLDLLRPGDVLTHAYSGAGNNTVVDGKVLDAALAA
                     KRRGVLIDVGHGGGSFDYTVCEAALQQGFTPDIISSDIHAVSVNTPGKPFLPWVMSKF
                     LNLGMPLEQVVTLATAAPAKAIGRVPKLGTLQIGAPADLSMVEIVEGPVDFVDTRRNQ
                     RTGRRWIKPVQTVKAGRPFGRPYPQPFAWP"
     gene            3575..4084
                     /locus_tag="VF991_22505"
     CDS             3575..4084
                     /locus_tag="VF991_22505"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX9559281.1"
                     /translation="MDGTTTRRDPRALQASLPAGTVIVASTGAGPFDQVMLDGRHILQ
                     ADEPVAAGGGDAGPGPYELLLMALGSCTSMTVHLYAARKKWPLEQVVVRLRHAKVHAE
                     DCADCEKPTAKIDRIDKSLEFIGPLDDAQRSRLVEIAEQCPVNRTLTSKIDIRTVLEP
                     TSGSAATAR"
     gene            complement(4053..>4416)
                     /locus_tag="VF991_22510"
     CDS             complement(4053..>4416)
                     /locus_tag="VF991_22510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX9559282.1"
                     /translation="TGLGIGAYGVLALIMVMYLILGCLMDAMAMIILTVPIIFPLVTA
                     LGFDPIWFGVIIVMTVELGLIHPPVGMNVFVIKSVVQDVSFASIFKGVLPFIATDILR
                     LIILIAFPVIALWLPSQM"
BASE COUNT          787 a         1456 c         1488 g          685 t
ORIGIN      
        1 gtcggcgcgg cgcctgctcg attttgccgc cgccggcgag acgcatgacg agcggctatg
       61 gatgccgatc gccgaagcga ccggtgcgat gggcaacaca tcgtgcctgg tcggcaccgc
      121 cgagcaggtc gcccgcgccc tgctggaata ctacaagctc ggcatccact cgttcctgat
      181 ccgcggtttc gatccgttcg aggacaccgt cgatttcggc cgcgagctga tcccgcgcct
      241 gcgcgccggc gccgaggagc tggaccgcgc caaagcggcg tgacggctgc agctctgtcg
      301 tcctgagcgt aagcgaagga cctcatcgcc gcttgccacg ggcatgagat ccttcgcttt
      361 cgctcaggac gacagtaggc gctacgccgg cgacgccgcc gtcgcctcga ccagccgccc
      421 ctcctcgccg ggcttgcgct gcagctcgat ccggcgatcg tgccagcggc gcagcgacgg
      481 ccgatggccg atcgacacga tggttgtcgc cggcagtcgg cgcttcagct cgtcatagat
      541 cgcggcctcc atcgcctcgt cgagcgaggc cgtggcctcg tcgaggaaca gccagtcggg
      601 cttgaacacc agggcgcgcg ccaccgccag cctctgctgc tcgccgcccg acagcgtatt
      661 ggcccagtgc tccacttctt tcaggcgacc ggcgagatgg ccgagctggg tcgcctccag
      721 cgccgcgacg atctcgccgt cactggcctt ggactgctcg tcgggatatt tcaccgcgtc
      781 gctcaaggtg gcgatcggga tgtagggctt ctgcggcagg aacagtacgc gcgcgcctgc
      841 cggcacatgg acatggccct tgccgaacgg ccagatgccg gccagggcgc ggaacagcgt
      901 gctcttgccc gagccgctcg ccccggtgat caaggtcgag cgaccttgcg gcaggatcag
      961 ggtggcatcg cgcagcagcg cctggccgtt gggcaggccg agcgtgaggt cgagcgcgcc
     1021 gacgtcggtg cggtcggcat cgggcaccag gtcgatggcg ctctccggct tggcgtcggt
     1081 cgcggcctgc aggcccctca gacgatccat gacggcgcgc aattcggcga gagacgtgta
     1141 gttgtcgacg aagaacgaca gggcggactg cacctggccg aaggccgagg cggtctgggt
     1201 catgacgccg aaggtgatgg cgccggcaaa gaatcgcggg gcggtcacga cgtaggggaa
     1261 gatgatggcg agctgggcgt agccgctttg atagaaggcg agttgggcct gggtgaacaa
     1321 gacccgccag ccgttggcaa agacatcggc gaacctcgcg ttcaactgat cggcctcgcg
     1381 ctgctcgccg cgatagaggg cgatgccctc ggcattctcg cgcacgcgca ccagcgagaa
     1441 acggaaattc gcctcgaaac gctgcttctg gaagttgagg ggaatcagcc ggcggccgac
     1501 gatgttggcc aggaaggtgc cgacgatggc atagatcagg cagacccacg ccatgtatcc
     1561 cggaatggtg acatccagtc cgatcgcggc cagcgacagg ggaccggaga gggtccacag
     1621 aatgaaaagg aacgagatca gcgtcgcgac cgcaccgagc aggccgagca taagcgtcat
     1681 ggtgtactcg ccgagctggc gcagatcctc ggcgatgcgc tggtcggcat tgtcgacggt
     1741 tcgctgcaac tcgatgcgat aatagcctcg cccgtccagc cagtgggcga gatagtagcg
     1801 cgtcagccag cggcgccagc gcaggcgcag gtaggggctg acgatggccc gcgccacgaa
     1861 gacggcgatg aacatcgccg cgagccagga aaagaaaatg atctcctgcc agaagacggc
     1921 ttcgtccttg ttctggatgc tgtcgtagaa gcgccggttc cactcgttga acaacacttc
     1981 caggccgaca ccgctgaacg tgagcgcaat ggcgccgatc agcagcggaa tggcaatggg
     2041 ccactcctcg gacttgaaat agggaatgac gaggtgccac cagtcgccga tgaacgagcc
     2101 tactcttttc atgcgggaat cctttcggcg cgcacagtag cgccacgcct gactggatac
     2161 atctcccgag atttgtcggc ctcgttcgcg accatcggcc gcgcctggtc gcgttgccgg
     2221 cggcggctcg ccttggcggc ggcattgtgg tgaactcggc ggacaacaaa agccctcggg
     2281 agggaacgac catggatgat gtgacccgca gaaggttgtt gcagggcacc ggcgcggcca
     2341 ttgccgcggt gggcctcctc gacgaggcgg cggcgcgcac cgccgcgttc ggcccggccg
     2401 acccttacga tctcgtcatc cgcggcggtg aggtgctcga tcccagccag ggcctgcgcg
     2461 ggcggcgcga catcggcatc cgcaatgccg cgatcgctgc cgtcgagccc gagatcgcgg
     2521 cggagcgcgg cacccaggcg ttcgacgccg ccggccagct cgtgctgccc ggcctcatcg
     2581 acttccatgc ccatgtcctg ccgggcggcg gcatcggtct ctccggcgac gagctggtgc
     2641 cctacaccgg caccacgacc tacgtgagcg cgggcgacgc cggcgtcggc agcttctcgg
     2701 ctttcaagca tttcggcatc gcccagtcgc gcacccgcat cctcgccttc ctgcacatct
     2761 cgtcgatcgg cctgtcgggc tttccggtcg gcgagatgct caacatcgat cacgccaggg
     2821 tcgatgccgc ggcgaagatg ctggcggaga accccgacgt gctgctcggc ataaaagtcc
     2881 gcgagagcct cgacgtggtc ggcaacaacg ggctcgagcc gctgaagcgc gccatcgccg
     2941 caaccgagcg ctccggcgtc gagggcgcgc gggtcatgtg ccacatcggc aacgcgccgg
     3001 gcaatctctc ggaactgctc gacctcctgc gcccgggcga tgtgctgacg catgcctata
     3061 gcggcgcggg caacaatacc gtggtcgacg gcaaggtgct cgacgccgcc ctcgctgcca
     3121 agcggcgcgg cgtgctgatc gatgtcggcc atggcggcgg cagcttcgac tacacggtgt
     3181 gcgaggcggc cctccagcag ggtttcacgc cggacatcat cagcagcgac atccacgccg
     3241 tcagcgtcaa cacgccgggc aagccgttcc tgccctgggt gatgagcaag ttcctcaatc
     3301 tcggcatgcc gctcgagcag gtggtgacgt tggcgacggc cgcgccggcc aaggcgatcg
     3361 gccgcgtgcc caagctcggc acgctgcaga tcggcgcgcc ggccgacctc tcgatggtcg
     3421 agatcgtcga gggcccggtc gacttcgtcg acacccgccg caaccagcgc accggccggc
     3481 gctggatcaa gccggtgcag acggtcaagg cgggccgccc gttcggccgg ccttatccgc
     3541 agcccttcgc ctggccgtaa acaaggaggt cgacatggac ggaacgacaa cacggcgcga
     3601 tccgcgcgcg ctccaggctt cgctgccggc gggaaccgtc atcgtggcgt cgaccggcgc
     3661 cggtccgttc gaccaggtca tgctggacgg acgtcatatc ttgcaggccg acgagccggt
     3721 cgccgccggc ggcggcgacg ccgggcccgg tccctacgag ctgcttctga tggcgctcgg
     3781 cagctgcacc tcgatgaccg tccatctcta cgccgcgcgc aagaaatggc cgctcgagca
     3841 ggtcgtcgtg cggttgcgcc atgccaaggt tcatgccgag gactgcgccg attgcgagaa
     3901 gcccacagcc aagatcgacc gcatcgacaa gagcctggaa ttcatcgggc cgctggacga
     3961 cgcgcagcga agccgactgg tcgagatcgc cgaacagtgc ccggtcaacc gaacgctgac
     4021 atcgaaaatc gacattcgca cggtgctcga acctacatct ggctcggcag ccacagcgcg
     4081 atgacgggaa aggcgatcag gatgatcagc cggaggatgt cggtggcgat gaagggtagc
     4141 acgcccttga agatcgacgc gaagctcacg tcctgcacca cgctcttgat gacgaatacg
     4201 ttcatgccga ccggcggatg gatcaggccc aattcgacgg tcatgacgat gatcacgccg
     4261 aaccagatcg ggtcgaagcc gagcgcggtc accagcggga agatgatggg cacggtgagg
     4321 atgatcatcg ccatggcgtc catcaggcag cccaggatca agtacatgac catgatcagg
     4381 gcgagcacgc cgtaggcgcc gatgccgagg ccggtt
//
LOCUS       DASWGA010000982         1585 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1765770, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000982 DASWGA010000000
VERSION     DASWGA010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1765770"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VF991_22515"
     CDS             complement(<1..681)
                     /locus_tag="VF991_22515"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX9559283.1"
                     /translation="MAKALRAIDRRLLLAAVLLAVSLSGCDMVEGWFGKSKQPLPGER
                     VPVFAERGELEPDKEMASVPVVLPAPTVNTSWPQSGGFANYAMHNLAVGDSPQIIWTA
                     DIGAGSSSSRVLTTPPVVAEGKVFVKDAQSTVSAFNADTGQLVWRVTLKPEKARDADE
                     FGGGLAYYGGRLFVTTGFAAVFSLDPSDGKEIWNSMVSAPVRGAPLVFGDRVFAISID
                     NRLQALAAI"
     gene            complement(686..1333)
                     /locus_tag="VF991_22520"
     CDS             complement(686..1333)
                     /locus_tag="VF991_22520"
                     /inference="COORDINATES: protein motif:HMM:NF021492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9559284.1"
                     /translation="MSDSAAFHEVDEAVRKDEIRAWWGRYGSWVVAAAVVAVVAVAGL
                     VGWRQYDTAQRAQASAAYSAALAKLAQDPAAARAEFDRQASSAPEPYRSLANLIAAQL
                     REPADAQVSALLAVAPTLSTSELADLATVIAGYKSVDSPKAEEMVAKLEPLAGPDRPF
                     RLSVRELEALVAARKGDAKRARDLWSEIAKDPAAPQGAAQRAAAMLNFYGAAEAK"
BASE COUNT          246 a          554 c          541 g          244 t
ORIGIN      
        1 gatggcggcc agcgcctgca ggcggttgtc gatgctgatg gcgaacacgc gatcgccgaa
       61 caccagcggc gcaccgcgca ccggcgcgct caccatcgag ttccagatct ccttgccgtc
      121 gctcggatcg agcgagaaca ccgccgcgaa cccggtggtc acgaacagcc ggccgccgta
      181 ataggcgagc ccgccgccga attcgtcggc gtcgcgagct ttttcgggct tgagcgtcac
      241 ccgccagacc agctggccgg tgtcggcgtt gaaggccgag acggtgcttt gggcatcctt
      301 cacgaagacc ttgccctcgg ccacaaccgg cggcgtggtc aggacgcgcg acgaggacga
      361 gcccgcgccg atatcggccg tccagatgat ctgcggtgaa tcgccgaccg ccaggttgtg
      421 catggcgtag ttggcgaaac cgccggactg cggccacgac gtgttgaccg tcggcgccgg
      481 caggacgacc ggcacgctgg ccatctcctt gtcgggctcg agctcgccgc gttcggcaaa
      541 gaccgggacg cgctcgcccg gcaacggctg cttgctcttg ccgaaccagc cctcgaccat
      601 gtcgcaaccg gacagcgaca cggcgagcag gacagcggca agcaggaggc gacggtcgat
      661 cgcacgcaac gctttcgcca tgacgctact tcgcctccgc cgcgccgtag aagttcagca
      721 tcgcggcggc gcgttgggcg gcgccttggg gggcggccgg atccttggcg atctcgctcc
      781 acagatcgcg cgcccgcttg gcgtcgccct tgcgcgccgc caccaacgcc tccagttcgc
      841 ggacgctcag ccggaacggc cggtcgggcc cggcgagcgg ctcgagcttg gcgaccatct
      901 cctcggcctt gggcgaatcg acgctcttgt agccggcgat cacggtggca aggtcggcga
      961 gctcggacgt cgacagcgtc ggcgccacgg ccagcagggc gctgacctgg gcgtcggcgg
     1021 gctcgcgcaa ctgggcggcg atcaggttgg ccagcgaacg atagggttcg ggcgcactgc
     1081 tggcctgcct gtcgaattcc gcccgcgccg cggcggggtc ttgggcaagc ttggccagcg
     1141 ccgccgaata tgcggcactc gcctgggcgc gctgggcggt gtcgtactgg cgccagccga
     1201 ccaggccggc cacggcgacg acggcgacca cggcggcggc cacgacccag ctgccgtagc
     1261 ggccccacca cgccctgatc tcgtccttgc ggacggcttc gtcgacctca tggaaagcgg
     1321 cggaatcgga caacaatcgg ctcccggatt atcgcggaat atcaacagct tcagcggcgg
     1381 ttcatagccc cggccccggg ctttggcaaa ccgccggccg gccgtgttgg gggcgcttta
     1441 ccctggccgg cggttctgca acaattcgcc cgcacgagat gattccaacc gcggctgcat
     1501 gaccaacttg tatcgtttcg ccgaccaaag ggcgcggcgc cggattgtct cattcgatcg
     1561 gcgggaactg tcccggcttc tcagc
//
LOCUS       DASWGA010000983         2928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1512710, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000983 DASWGA010000000
VERSION     DASWGA010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2928
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512710"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VF991_22525"
     CDS             <1..255
                     /locus_tag="VF991_22525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-hexosaminidase"
                     /protein_id="HEX9559285.1"
                     /translation="KALGGSLGERAERALAAGCDLGLHCNGRREEMEDIVQCTGPLTD
                     AAQRRFQAGRDALQRHRAPLGRAGLVDASQRLAALLPEWG"
     gene            311..1117
                     /locus_tag="VF991_22530"
     CDS             311..1117
                     /locus_tag="VF991_22530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HEX9559286.1"
                     /translation="MDEPAHPANPDGFTADGPDVIAPGEGELIVNLEGFEGPLDLLLS
                     LARDQKVDLRRISMVALVDQYLAHVAQARRMRLELAADYLVMAAWLAYLKSRLLLPEP
                     PAGEELSGQEMADALQWQLRRLEAMQEAGVRLMARPQLGKDIFSRGQPEGVIVVRRAI
                     WDVKLYDLLAAYGHPLRPKDADTYQIEPMQFFSVEEAAERLGRMLGIAIDWQSLEAFL
                     PAGLTDPTRRRSALAATFVAGLQLAKEGSVDLRQAERFGPIYLRKRNEQR"
     gene            1130..1798
                     /gene="scpB"
                     /locus_tag="VF991_22535"
     CDS             1130..1798
                     /gene="scpB"
                     /locus_tag="VF991_22535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEX9559287.1"
                     /translation="MAQTDPEKVTDVVSPDHAQHLRLLEALIFAGTQALDEQELADRL
                     PNDADVKRLLADLAEMYAGRGVNLVQVAGGYAFRTASDLSEKLKIERPVTRKLSRAAI
                     ETLAIIAYHQPVTRAEIEEVRGVGLSKGTLDLLFEQNWIRPVGRRRAPGRPVTWGTTD
                     FFLEHFGLPSLDDLPGQEELKAAGLLDPRAQPPIFRPEEPDLPLEPADDEAEEPLAAD
                     ETGH"
     gene            1895..2158
                     /locus_tag="VF991_22540"
     CDS             1895..2158
                     /locus_tag="VF991_22540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEX9559288.1"
                     /translation="MGSFSVWHWLIVLAVVLLLFGGRGKISQLMGDFGKGLSAFKKGV
                     GAQQEETPPAQAGQPGDSAKPITAQTTTTPPGGQVHQDTAAKV"
     gene            2185..2706
                     /gene="tatB"
                     /locus_tag="VF991_22545"
     CDS             2185..2706
                     /gene="tatB"
                     /locus_tag="VF991_22545"
                     /inference="COORDINATES: protein motif:HMM:TIGR01410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HEX9559289.1"
                     /translation="MFGIDSPELLVIAVVALIVIGPKELPGMLRSWGKWMAKARGMAA
                     EFRGHVDEMVRQSELDEVKKQLEGPSGLDLKSLDPTREIKSAIQEGMAEGEKAVAEAK
                     GTFDNPLAEPESAPQIAVEPAAEPTPEVAPTIAVEPPPEPAPATAEATPPSPAESSPP
                     AEQEKPAKAVAAG"
BASE COUNT          513 a          992 c          964 g          459 t
ORIGIN      
        1 aaggcgctgg gcgggtcgct cggcgagcgc gccgagcgtg ccctggcggc gggctgcgac
       61 cttggcctgc attgcaacgg tcgccgggag gagatggagg atattgtcca gtgcaccggt
      121 ccgctgaccg atgccgccca acggcgcttc caggccggtc gcgacgcgct gcagcgccat
      181 cgtgcgccgc tcggcagggc cggcctggtt gatgcatccc aaaggcttgc ggcgcttttg
      241 cccgaatggg gataaggccc ggccaaatca tgtggcggta tgcgccacca ctggattaaa
      301 cccaagctgc atggacgaac ccgctcaccc cgccaaccca gacggcttca ccgccgacgg
      361 ccccgacgtg atcgcgccgg gcgagggcga gctgatcgtc aatctggaag gcttcgaagg
      421 cccgctcgac ctgctgctca gcctggcgcg cgaccagaag gtcgatcttc gccgcatctc
      481 catggtggcc ctggtcgacc agtatctggc gcacgtggcg caggctcgcc gcatgaggct
      541 cgagctcgcc gccgactatc tcgtcatggc ggcgtggctt gcctacctca agtcgcgcct
      601 gttgctgccc gaaccgccgg ccggcgagga actgtcgggc caggagatgg ccgacgcgtt
      661 gcaatggcaa ttgcgccggc tcgaggcgat gcaggaagcc ggtgtgcgcc tgatggcccg
      721 tccgcagctc ggcaaggata tcttctcgcg cggccagccc gagggcgtca tcgtcgtgcg
      781 ccgcgccatc tgggacgtga agctctacga tctgctcgcc gcctacggcc atccgctcag
      841 gcccaaggac gccgacacct atcagatcga gcccatgcag ttcttctcgg tcgaggaagc
      901 ggccgagcgg ctgggccgca tgctgggcat cgccatcgac tggcagtcgc tcgaggcgtt
      961 cctgccggct ggcctcaccg acccgacgcg ccgccgctcg gcgctggccg cgactttcgt
     1021 ggcgggcctg cagctcgcca aggagggttc ggtcgacctg cgccaggccg aacgcttcgg
     1081 gccgatctat ttgcgcaaac gcaacgagca acggtgacgg tgctaaaaaa tggcccagac
     1141 cgatcctgaa aaagtgaccg acgtcgtctc tcccgaccat gcccagcatc tcaggctcct
     1201 cgaggcgctg atctttgccg gcacccaggc gctcgacgag caggagctgg ccgaccggct
     1261 gcccaacgat gccgacgtca agcgcctgct ggccgatctc gccgagatgt atgccggccg
     1321 cggcgtcaat ctcgtgcagg tggcaggcgg ctacgccttc cgcaccgcgt ccgatctctc
     1381 cgagaagctc aagatcgagc ggccggtgac gcgcaagctg tcgcgggcgg cgatcgagac
     1441 cttggccatt atcgcctatc accagccggt gacgcgggcg gagatcgaag aagtgcgcgg
     1501 cgtcggtctc agcaagggca cgctcgatct tttgttcgag cagaactgga tcaggccggt
     1561 cggccgccgc cgcgcgccgg gcaggccggt gacctggggc acgaccgact tcttcctcga
     1621 gcatttcggc ctgcccagcc tcgatgacct gccgggccag gaggaactga aagccgcagg
     1681 gctcttggac ccgcgcgccc agccccccat attcaggccg gaagagcccg atctgccgct
     1741 tgagccggcc gacgacgagg ccgaggaacc gctcgccgcc gacgaaaccg ggcactgagc
     1801 cgcaatacgg ccttattagg caggttgccg gcccttcgca cgcggtgtca taatcagctg
     1861 acgccgatcg caaacgtatt gggagcattt tcacatgggt agcttcagcg tatggcactg
     1921 gctcatcgtg ctggccgtcg tgctgctgct gttcggcggt cgcggtaaga tctcgcagct
     1981 catgggcgac ttcggcaagg gcctgtcggc cttcaagaag ggcgtgggcg cgcagcagga
     2041 agagacgccg ccggcgcagg ccggtcagcc gggcgacagc gccaagccga tcacggccca
     2101 gaccacgacc accccgccag gcggtcaggt ccaccaggac accgccgcca aggtctgacg
     2161 gcgcgcggcc gagcgtgaac gccgatgttc ggtatcgaca gccctgagct tctggtcatt
     2221 gcggtcgtgg cgctgatcgt catcggcccc aaggagctgc ccggtatgct gcgcagctgg
     2281 ggcaagtgga tggccaaggc gcgcggcatg gcggctgagt tccgcggcca tgtcgacgag
     2341 atggtccgcc agtccgagct cgacgaggtg aagaagcagc tcgagggtcc atccgggctg
     2401 gacctgaagt cgctcgatcc gacccgggag atcaagagcg ccatccagga aggcatggcc
     2461 gagggcgaga aggccgtggc cgaggccaag ggcacgttcg acaatccgct cgccgagccg
     2521 gaatcggcgc cgcaaattgc cgtggaaccc gcggccgaac cgacgcctga agtggcgccc
     2581 acaatcgccg ttgaaccccc gcccgagccc gcgcctgcaa ccgccgaagc aaccccgcca
     2641 tcgccggcgg aatcgtcgcc tcctgcagag caagagaagc cagcaaaagc cgtcgctgcc
     2701 ggataattga cctcttgccg gagcgcttcg gcaagaagtg ccaattagcg ctttgaattg
     2761 ggccgcaaag ggcggcataa cgcgccactc atgccgcgat tccgactttg acccaggcgc
     2821 acgacggacc cgaagacgac aagccgatgc cgctgctcga tcacctgatc gagctgcgca
     2881 aacgcctgat ctatgccctg ctgggcttct tcttcgtctt cttcatca
//
LOCUS       DASWGA010000984         5351 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2023290, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000984 DASWGA010000000
VERSION     DASWGA010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5351
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2023290"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..993)
                     /locus_tag="VF991_22550"
     CDS             complement(88..993)
                     /locus_tag="VF991_22550"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9559290.1"
                     /translation="MPLWIPITVAAALFQNIRTTMQQKIRGVLSVDGANFVRYLYGAP
                     LALAALTFLVFGTGRHVPTISMAFLGLVTIAGVAQIVATSLMIHSFSLRNYAVGTVYS
                     KTETVFVALFATFIAHEPLRLGAWIGILVCLGGVAILSVRGSFANVRSVLADLTHKGA
                     LYGILAGAIFAIAAGTIREASKHLPDGDFMVRGITVLACMNTIQVVLMAAYLARRDRP
                     QLAKVWVNWRSSIWVGIFSVLGSAGWALAMTLENAALVRAVGQIELVFTFIASHVVLK
                     ERPSTGEWVGSILVVGGVVLILIAR"
     gene            1056..2123
                     /locus_tag="VF991_22555"
     CDS             1056..2123
                     /locus_tag="VF991_22555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_263865015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:1764..1766,aa:Sec)
                     /transl_table=11
                     /product="alkylhydroperoxidase-related (seleno)protein"
                     /protein_id="HEX9559291.1"
                     /translation="MRQELGDALSTAWFALGKPGVWWAGAERVKIAGETRAARSCALC
                     RKRKTALSPHAVSGSHDAASELSESAIEAIHRIVSDPGRLSEAWYRRTTSSGLSDEAY
                     VELLSVVAITTAIDTFDRACGAPPRPLPAPLPGAPTQQRPAGAKPGLGWMPMLAPEDV
                     MSDDPPLYTSGGRIGGNVHRALSLVPSAMMQFWDMFETMYLPQDAMRDFAREYRAISH
                     AQIEMLAARVAVRNQCVYUITSHLALLRGSGRHSGTDYGFDGIVHGAGGSGVAHEAEL
                     LAFADAAIGEDGPLAEVRAALVASIGEEAMADAAAVVGGFDAITRVADGSGIPLEPPK
                     AEATAEWRASLGIDAFWTMKV"
     gene            2192..3943
                     /gene="ilvD"
                     /locus_tag="VF991_22560"
     CDS             2192..3943
                     /gene="ilvD"
                     /locus_tag="VF991_22560"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX9559292.1"
                     /translation="MAKKKQPKLHPNPTFDKSKMPSRHTTVGPERAPHRSYLYAMGLN
                     EKQIAQPIVGVATCWNEAAPCNIALSRQAQAVKIGVDRGGGTPREFTTITVTDGIAMG
                     HQGMKSSLASRDLIADSVELTMRGHCYDAMVTLAGCDKSLPGMMMAMLRLNVPSVFMY
                     GGSILPGKFRGKDVTVVDVFEGVGMHAAGKFSDADLHELECAACPSAGSCGGQFTANT
                     MACVSEAIGLALPGSAGAPAPYETRDQYAEASGEAAMNLLRLGIRPRDICSREAFENA
                     AVVVAATGGSTNAGLHLPAMAHECGIKFDLHDVAKIFKKTPYIADLKPGGKYVAFDLY
                     NVGGIPVVIKELLDAGLLHGDVLTATGKTLAENHKEVKFPDNQDVVYRVKDCITPTGG
                     VVGLKGNLAPDGAIVKVAGMHRLVFTGPARCYDSEEAAFEAVVKGKFKTGDVIVIRYE
                     GPKGGPGMREMLSTTAALYGLGVGETVALITDGRFSGGTRGFCVGHVGPEAHVGGPIG
                     LLKNGDIITIDAVKGRLSVDLSDKELKKRRKAFKPRKNGYTAGALWKYAELVGPAVDG
                     AVTHPGAKKESHVFADI"
     gene            3953..4915
                     /locus_tag="VF991_22565"
     CDS             3953..4915
                     /locus_tag="VF991_22565"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX9559293.1"
                     /translation="MLRRAVLAAALATPFAARAETTWPTKPIRIVVPFNPGGAIDALV
                     RVIADGLTTRLGQQVLVDPKPGANTIVGSEIVAKAAPDGYTFLITTNSTHTNNPTLYA
                     KLPFDPAKDLMPVSLVSLGTILLVVKADAPFSDLRGMAAWVKQLGRPASYGSWGIGSS
                     GHLYGLMFEKALGGYYNHVPYRGDVPALQDVANGTLDITWASPTSAKTQIAAGRVKPI
                     AAAGSNRSASMPELTTFAEQLIAGFDLNLFVAAYAPAGTPTAIVDRLQREIRLVISQP
                     DVTEKLIAQGQTPVGSTPKELADVLVRETPIWADLIRQSGAKVE"
     gene            4926..>5351
                     /locus_tag="VF991_22570"
     CDS             4926..>5351
                     /locus_tag="VF991_22570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX9559294.1"
                     /translation="MSASTDIRSAYTLQPPTYNARLTEVGRGTPMGELLRRYWHPVGL
                     SEDAGTTPRAVKILGEELILFRDGQGRPGLVYPRCCHRGTTLYYGKIEERGIRCCYHG
                     WLFDVEGHCLEMPCEPNPAGGQCQRVRQPWYPVEERYGLL"
BASE COUNT          932 a         1790 c         1816 g          813 t
ORIGIN      
        1 cggctgcaat gcgggccggc gatggtggtg gagaagtcca ggatgcgcag gccgtgcagc
       61 ggccgggggt tcgtttccgt catcgggtca ccgggcaatc aggatgagta cgaccccgcc
      121 gaccaccagg atgctgccga cccactcgcc ggtggacggc ctttccttga gcacgacgtg
      181 cgaggcgatg aaggtgaaga cgagttcgat ctggccgacg gcgcgcacca gggcggcgtt
      241 ctcgagcgtc atggcgagcg cccagccggc cgagcccagc acgctgaaaa tgccgaccca
      301 gatcgaggaa cgccagttga cccagacctt ggcgagctgc ggccggtcgc ggcgcgcgag
      361 ataggccgcc atcagcacga cctggatggt gttcatgcag gccagcaccg tgatgccgcg
      421 caccatgaag tcgccgtctg gcaggtgctt ggacgcctcg cggatggtgc cggcggcgat
      481 ggcgaagatc gcgccggcca ggatgccgta gagcgcgccc ttgtgcgtga ggtcggccag
      541 cacgctgcgg acattggcga acgagccgcg cacgctcagg atcgccacgc cgcccaggca
      601 gaccaggatg ccgatccagg cgccgaggcg gagcggctcg tgggcgatga aggtggcgaa
      661 cagggccacg aacaccgtct cggtcttgga gtagaccgtg ccgacggcat agttgcgcag
      721 cgagaaggag tggatcatca gcgaggtcgc cacgatctgg gcgacgcccg caatggtgac
      781 caggcccagg aaagccatcg agatcgtcgg cacgtggcgg ccggtgccga acaccaggaa
      841 ggtcagcgcc gccagggcca agggagcgcc gtagaggtaa cggacgaaat tggcgccatc
      901 gacgctcagc acgccacgaa tcttctgctg catcgtcgtg cggatgttct gaaacagcgc
      961 agcggcgacg gttatcggta tccagagcgg cacgattcct cccccagcca gtgtatggcc
     1021 tcgacgggcc gccgtctgcc gcctagattt tcacgatgcg acaagaattg ggagacgcgc
     1081 tgtcgactgc ctggtttgcg ctaggcaagc ccggcgtgtg gtgggccggc gcagaacgcg
     1141 tgaagattgc cggcgagacg cgtgcggcgc ggtcctgcgc cctgtgccgg aagcgcaaga
     1201 ccgcactgtc gcctcatgcc gtatccggat cgcacgacgc ggcgagcgaa ctctcggaat
     1261 cggcaatcga ggccattcat cgcatcgttt ccgatcccgg ccgcctgtcg gaggcgtggt
     1321 atcgccggac gacgtcgtct ggcctcagtg acgaagccta tgtcgagctg ctgagcgtgg
     1381 tggcgatcac gaccgcgatc gacacgttcg accgggcgtg cggcgcgccg ccgcggcctc
     1441 tgcccgcccc gttgccgggc gcgccgaccc agcagcgccc tgcgggggcg aagccgggac
     1501 tgggctggat gccgatgctc gcgcccgagg atgtcatgtc cgacgatccg ccgctctaca
     1561 cctcgggcgg ccgcatcggc ggcaacgtgc accgcgcctt gagcctggtg ccgagcgcga
     1621 tgatgcaatt ctgggacatg ttcgagacca tgtatctgcc gcaggacgcg atgcgggact
     1681 tcgcacggga gtatcgcgcg atcagtcatg cccaaatcga gatgctggct gccagggtcg
     1741 ccgtccgaaa ccaatgcgtc tattgaatca ccagccatct ggccttgctc cgggggagcg
     1801 gcaggcatag cggtacggac tacggcttcg acggcatcgt ccacggcgcg ggtggcagcg
     1861 gggtcgccca cgaggcggaa ttgctcgcct tcgccgatgc agccatcggc gaggacggcc
     1921 cgctcgccga ggtccgggcg gcgcttgtgg cgtcgatcgg cgaggaggcg atggcggacg
     1981 cggctgccgt ggttggcggc ttcgatgcca ttacgcgcgt ggcggacggg tcgggcattc
     2041 cgctggagcc gcccaaggcc gaagccaccg ccgagtggcg ggccagcttg ggcatcgatg
     2101 ccttctggac catgaaggtg taacgcctag gcattaccgg cgcgcatcgc taaagtcgcc
     2161 gccgattcag aaaaggcgga gacacggcgc catggccaag aagaagcaac ccaagctgca
     2221 tcccaatccc accttcgaca agtcgaagat gccgagccgg catacgacgg tcgggcccga
     2281 gcgcgcgccg catcggtcgt atctctacgc catgggcctc aacgagaagc agatcgccca
     2341 gcccatcgtc ggcgtagcga cctgctggaa cgaggccgcg ccctgcaaca tcgcgctcag
     2401 ccgccaggcc caggccgtca agatcggcgt cgatcgcggc ggcggcacgc cgcgcgagtt
     2461 caccaccatc acggtgaccg acggcatcgc catgggccac cagggcatga agtcctcgct
     2521 cgccagccgc gaccttatag ccgactcggt tgagctcacc atgcgcggcc attgctacga
     2581 cgccatggtg accctggcgg gctgcgacaa gtcgctgccc ggcatgatga tggccatgct
     2641 gcggctgaat gtgccgtcgg tgttcatgta tggcggctct atcctgcccg gcaagttccg
     2701 cggcaaggac gtcaccgtgg tcgacgtgtt cgagggcgtc ggcatgcatg ccgccggcaa
     2761 gttctcggat gccgacctgc atgagctcga atgcgcggcc tgtccgtcgg ccggctcgtg
     2821 cggcggccag ttcaccgcca acaccatggc ctgcgtctcc gaggcgatcg gcctggcgtt
     2881 gccaggctcg gccggggcgc cggcacctta tgagacgcgc gaccaatatg ccgaggcctc
     2941 gggcgaggcg gcgatgaacc tgctgcgcct cggcatccgg ccgcgcgaca tctgctcgcg
     3001 cgaggccttc gagaacgccg cggtcgtggt cgccgccacc ggcggctcga ccaatgccgg
     3061 cctgcacctg ccggcgatgg cgcatgaatg cggcatcaag ttcgacctgc acgacgtcgc
     3121 caagatcttc aagaagacgc cgtacatcgc cgacctcaag ccgggcggaa agtacgtcgc
     3181 cttcgatctt tacaatgtcg gtggcattcc cgttgtcatc aaggaactgc tcgatgccgg
     3241 cctgctgcat ggcgacgtgc tcacggcgac cggcaagacg ctggccgaga accacaagga
     3301 ggtgaagttc ccggacaacc aggacgtggt ctatcgcgtg aaagactgca tcacgccgac
     3361 cggcggcgtg gtcggcctca agggcaatct tgcgcccgac ggcgccatcg tgaaggtggc
     3421 cggcatgcac cgcctggtct tcaccgggcc ggcgcgctgc tacgacagcg aggaggcggc
     3481 gttcgaggcc gtcgtgaaag gcaagttcaa gaccggcgac gtgatcgtca tccgctacga
     3541 aggtcccaag ggcggcccgg gcatgcgcga gatgctgtcg accacggcgg cgctctatgg
     3601 tcttggcgtc ggcgagacgg tggcgctgat caccgatggg cgcttctccg gcggcacgcg
     3661 cggcttctgc gtcggccatg tcggccccga agcccacgtc ggcggcccga tcgggctttt
     3721 gaagaacggc gacatcatca ccatcgacgc cgtgaagggc cggctttcgg tcgacctttc
     3781 agacaaggag ctgaagaagc ggcgcaaggc gttcaagccc cggaagaacg gctacacggc
     3841 gggcgcgctc tggaaatacg ccgagctcgt cggcccggcg gtcgacggcg cggtgacgca
     3901 tccgggcgcg aagaaggaaa gtcacgtctt cgcggacatc tagggagctg aaatgctgag
     3961 acgcgccgtc ctcgcagccg ccctcgcgac gccgttcgct gcgcgggccg agacgacctg
     4021 gccgaccaag ccgatccgca tcgtcgttcc gttcaatccc ggcggcgcga tcgatgccct
     4081 ggtgcgggtg atcgccgacg gcctgacgac gcggctcggc cagcaggtcc tggtcgatcc
     4141 caagccgggc gccaacacca tcgtcggctc cgagatcgtc gccaaggcag cccccgacgg
     4201 ctacaccttc ctgatcacca ccaactcgac ccacaccaac aacccgacgc tctacgccaa
     4261 gctgccgttc gatccggcca aggacctgat gccggtgtcg ctggtatcgc tgggcaccat
     4321 cctgctggtg gtcaaggcgg acgcgccgtt cagcgacctc cggggcatgg ccgcctgggt
     4381 caagcagctc ggccggccgg cgagctatgg cagctggggc atcggctcga gcggccatct
     4441 ctatggcctg atgttcgaga aggcgctggg cggctactac aaccacgtac cctatcgcgg
     4501 cgacgtgccg gcgctgcagg atgtcgccaa cggcacgctc gacatcacct gggccagtcc
     4561 gaccagcgcc aagacgcaga tcgccgccgg ccgggtcaag ccgatcgccg cggccggttc
     4621 caatcgctcg gcatccatgc ccgagctcac cacctttgcc gagcagctga ttgccggctt
     4681 cgacctcaac ctgttcgtcg cggcctatgc gccggcgggc acgccgaccg caatcgtcga
     4741 tcgcctgcag cgcgagatca ggttggtgat cagccagccg gacgtcaccg agaagctgat
     4801 cgcgcaaggc cagacacctg tcggctcgac gcccaaggaa ctggccgacg ttttggtgcg
     4861 cgagacgccg atctgggccg acctgatcag gcagtccggc gccaaggtcg agtagggagc
     4921 cggccatgag cgcgtcgacc gatatccgct ccgcctacac gctgcagccg ccgacctaca
     4981 acgccaggct gaccgaggtc ggccgcggca cgccgatggg cgagctgctg cgccgctatt
     5041 ggcatcccgt cgggctcagc gaagatgccg gcaccacgcc gcgcgcggtg aaaatcctgg
     5101 gcgaggagct gatcctgttc cgcgacggcc agggccgccc cgggctcgtc tatccgcgct
     5161 gctgccaccg cggcaccacg ctgtactacg gcaagatcga ggaacgcggc atccgctgct
     5221 gctatcacgg ctggctgttc gacgtcgaag gccactgcct cgaaatgccg tgcgagccca
     5281 atccggccgg cggccaatgc caacgcgtgc gccagccctg gtatcccgtc gaggaacgct
     5341 atgggctgct g
//
LOCUS       DASWGA010000985         2340 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1638490, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000985 DASWGA010000000
VERSION     DASWGA010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1638490"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2340)
                     /locus_tag="VF991_22575"
     CDS             complement(<1..>2340)
                     /locus_tag="VF991_22575"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEX9559295.1"
                     /translation="EATLDAATATLTTATLTARPFTLAASGRYDRAADRLDATATLQS
                     GEPGPLGPLVAGARWRDLRLGAHAVLDGLAKQPQGTVVVNGSAEDLAVPALDGRLPAL
                     GRVAFDGKLGVQRDGSLTLDSLDATSALGSLKGNGGSYRPKTGAGEVKATVDLPSLAP
                     FSALAERELAGRAHLELSARNDAQGLTLGWRGTLADVGAPGVPPGLVAREVTLSGTGT
                     LRRDDSWSLADVRVASEAGSFGLSGRGQGSTGRFDLSVELQQLAALRAGLAGAIAVSS
                     TIELRPDGTTGGSLTARGDAEGQPLSVAGRFDVDAAGGIVVPSFEGHWAGAVLSVADL
                     AVARDRTSGSARLRVERLQDIGALLNTALAGSLEAEISTDPQLAAARLQARVRGHGLQ
                     TGGIAAGSLQIDATIDDPMGSAAVDAKIAGGGLRGVAGIGRLEGTVKGDRQSGFDVAL
                     KASGTQSDANLAAKVELLADEVRVALARFEGRHQGIPVALNAPSRLGIAGARIRIDPT
                     SLRLGGGRLSLQGVVDPVASDLRLELAGLPLSLLDTLAPGSGLDGSLQARAHVVGPMA
                     NPRIDATYAASNVRLRRPEAKLLPSLAVQGSGALAGGQATFDSRLSAGTASSLALKGK
                     LATASLAGSVAVTGAIDVAPFAPLLGNQVRNIAGTLRSNLTIDIAGAKVSGAGSIDFA
                     DGALSFPEMGLRLSGGTGRLVLQGDSLQLQQLSFQTGRNGALTASGTIRLDAVQGAAL
                     DLAVTSRRALLANRADLVATVSSDLKVTGSTGAGIDVVGP"
BASE COUNT          328 a          864 c          846 g          302 t
ORIGIN      
        1 cgggcccacc acgtcgatcc ccgcgccggt cgagcccgtc actttgaggt cgctcgatac
       61 ggtcgccacg aggtccgccc gattggccag gagggcgcgg cggctggtca ccgcaagatc
      121 gagcgccgcg ccttggaccg cgtcgagccg gatggtgccg ctcgccgtca gcgcgccgtt
      181 gcgcccggtc tggaaggaga gttgctggag ctgcaggctg tcgccttgca gcaccagccg
      241 gccggtgccg ccgctcagcc gcaggcccat ctcgggaaag ctgagagcgc cgtcggcgaa
      301 atcgatcgaa cccgcgcccg agaccttggc gccggcgatg tcgatcgtga ggttgctgcg
      361 caaggtgccg gcgatgttgc gcacctggtt gccgagcagc ggcgcgaagg gcgcgacgtc
      421 gatcgcgccc gttaccgcga ccgagccggc aagcgaggcc gtcgccagct tgcccttgag
      481 cgcgaggctg ctcgccgtgc cggcactcag ccgcgaatcg aaggtcgcct ggccgccggc
      541 cagcgcgccc gagccctgca cggcaagcga cggcagcaac ttcgcctcgg gccggcgcag
      601 ccgcacattc gaggcggcat aggtcgcgtc gatccgcggg ttggccatcg gaccgacgac
      661 gtgcgcccgc gcctgcaggc tgccgtcgag gccgctgccc ggcgccagtg tgtcgagcag
      721 cgacagcggc agcccggcaa gctcgagcct gagatcgctc gccacgggat cgacgacgcc
      781 ttgcagcgaa agccgcccgc cgcccaggcg caggctcgtc ggatcgatcc tgattcgcgc
      841 gccggcgatg ccgagccgcg acggcgcatt gagcgccacc gggatgccct ggtgacgtcc
      901 ctcgaaacgc gcgagcgcga cgcggacctc gtcggccaag agctcgacct tggccgccag
      961 gttcgcgtcg ctctgcgtgc ccgaggcttt cagcgcaacg tcgaagccgc tctgccggtc
     1021 gcctttcacc gtgccctcga gccggccgat accggcgacg ccgcgcaggc cgccgccggc
     1081 gatcttggcg tcgaccgccg cactgcccat cggatcgtcg atcgtggcgt cgatctgcag
     1141 ggagcccgcg gcgatgccgc cggtctgcaa gccgtggcca cggacgcgcg cttgcaggcg
     1201 agctgccgcg agctgcggat cggtgctgat ctcggcctcg agcgaaccgg ccagcgcggt
     1261 attgagcagc gcgccgatat cctgcagccg ctcgaccctg agccgcgcgc tgcccgacgt
     1321 gcgatcgcgc gccacggcga gatcggcgac gctcagcacc gcacctgccc aatggccctc
     1381 gaagctcggc acgacgatgc cgcccgctgc atcgacgtcg aagcggccgg ccacagacag
     1441 cggttggccc tcggcgtcgc cccgagccgt gaggctgccg ccggtcgttc cgtcgggccg
     1501 caactcgatg gtcgaggaga cggcaatggc gcccgcgagg ccggcgcgca gcgccgcaag
     1561 ctgctgcagc tcgacggaaa ggtcgaaccg gccggtcgaa ccctgaccgc ggccggagag
     1621 tccgaaggag cccgcttcgc tcgccacgcg tacatcggcg agcgaccagc tgtcgtcgcg
     1681 ccgcaacgtg ccggtaccgg acagcgtcac ctcgcgcgcc accagtccgg gcggcacgcc
     1741 gggcgcgccg acatcggcga gcgtgccccg ccagccgagc gtcaggcctt gtgcatcgtt
     1801 gcgcgccgac agctcgagat gcgcgcgtcc cgccaactcc cgttcggcca gcgccgagaa
     1861 gggcgccagg ctgggcaggt cgaccgtcgc cttgacctcg ccggcgccgg tcttgggccg
     1921 gtaggagccg ccgttgcctt tcagcgaacc cagggccgac gtcgcgtcca gcgagtcgag
     1981 cgtcaggctg ccgtcgcgct gcacgcccag cttgccgtcg aaggcgacgc gacccaacgc
     2041 cggcaggcgg ccgtcgaggg cggggacggc gagatcctcg gcgctgccgt tcacaacgac
     2101 cgtgccctgg ggttgcttgg ccaagccatc gaggacggcg tgggcgccaa gccgcaggtc
     2161 acgccagcgc gcgccggcca caagcgggcc gagcggaccc ggctcgccgg attgcagggt
     2221 cgccgtggcg tcgagccggt cggcagcgcg gtcgtagcgt cccgacgcgg cgagcgtgaa
     2281 cgggcgcgcc gtcagcgtcg cggtggtgag cgtcgcggtt gcggcatcga gcgttgcctc
//
LOCUS       DASWGA010000986         3930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1512827, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000986 DASWGA010000000
VERSION     DASWGA010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3930
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512827"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VF991_22580"
     CDS             complement(<1..217)
                     /locus_tag="VF991_22580"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEX9559296.1"
                     /translation="MSPDTGPLGTPFSLSTTEFPARAPQRLKVSFEFFPPKSEAMEKT
                     LWEAVTRLAPLRPSFFSVTYGAGGSTRQ"
     gene            complement(214..1188)
                     /locus_tag="VF991_22585"
     CDS             complement(214..1188)
                     /locus_tag="VF991_22585"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX9559297.1"
                     /translation="MDHLLTLLRAAAEDTRLRILALAAREDLTVSDYVHVLGQSQPRV
                     SRHLKLLVEAGLLERFREAQFTRFRLVTSGDDALLVREFVRRLDPKHARIAADRARLD
                     ALQQRRQTAAVRFFRDNAQRWDELRALHVADREIERALAHHLPVGARRLLDIGTGTGR
                     LLEVLAPKVEQAVGIDQSREMLALARANLARAGIDNADIRQGDMYALPFEADSFDVVT
                     IHHVLHYADDPAAALSEAARVVRPGGIVLVVDFSPHDLVELKREHAHVHLGFADNQVQ
                     GWLRSAGLNALEPIHFPGRRIMTGIWRGEREIAHRAGRTTTLAQGALR"
     gene            1422..2222
                     /locus_tag="VF991_22590"
     CDS             1422..2222
                     /locus_tag="VF991_22590"
                     /inference="COORDINATES: protein motif:HMM:NF016236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEX9559298.1"
                     /translation="MPKSVTAGVRRSAVTAALIAILVGGCASGDTGAAEPWDPIETPN
                     RFMFAINRTVDMIAIRPLAVMYRDGVPERAQKGVRNLLDNLGEPVTAINEVFQGDPSR
                     AATTMARFLVNSTLGLAGLFDVATMLGMKRTKEDAGQTIGMWAAKGVEPENGGFYLVL
                     PLVGPSNARDATGLMIDYAIDPFQILPIALNVDWFYYSGPRYALSVIDYRSRTMFALD
                     DLEKNSVDYYAALRSAYTQNRAELIRAKREKTDTKGELERRDNLALVK"
     gene            2274..2879
                     /locus_tag="VF991_22595"
     CDS             2274..2879
                     /locus_tag="VF991_22595"
                     /inference="COORDINATES: protein motif:HMM:NF017319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559299.1"
                     /translation="MLLLVCRRVVLGLAAGAVAALLAVSPAAADPAGDLIQSTAVEVI
                     DIIKSTTPGAARQAAIQRVLQTRFDLPYMGQTALGANWNKTSEAQRARFLKAAETAEA
                     RAYSERFGQYGGQTLVVVKVTSRPNGVSIVDSRLNQSNGQPLKLEWEVRDAGQGLRIT
                     DVKIEGVSMVMTRRSDFNSYIQNNGGTVEPLINELEARAAR"
     gene            2991..3800
                     /gene="cysE"
                     /locus_tag="VF991_22600"
     CDS             2991..3800
                     /gene="cysE"
                     /locus_tag="VF991_22600"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEX9559300.1"
                     /translation="MDSALVKNAAEPRSVDPVWTRIREAAQAAAADEPILAGTLHATI
                     LSQPKFESALSYHLARLASTTEVPAALIRQVFDEALSADPAIGLAARADIVAVAERDP
                     ACTSHLDPLLWFKGYHALQTSRVAHWLWKQGRRTLAHFLQSRSSALFGVDIHPGAVIG
                     KGIFIDHGTGVVIGETAVVEDGVSMLHGVTLGGTGKERGDRHPKVRRGVLLGAGAKVL
                     GNIEIGACAKIAAGSVVLEPVPAGCTAAGVPARIIGCVDVPEPALEMDQRI"
BASE COUNT          675 a         1295 c         1329 g          631 t
ORIGIN      
        1 gctggcgcgt cgagccgccg gcgccgtacg tcacggagaa gaacgacgga cgcaggggcg
       61 cgagcctggt caccgcttcc cacaaggtct tttccatcgc ctcgctcttg ggcgggaaga
      121 actcgaagga gacttttagg cgctgtggcg cgcgggccgg gaactccgtc gtcgacaggc
      181 tgaacggggt accgagcgga ccggtatcgg gactcatcgt aacgctccct gcgcaagggt
      241 ggtggtgcgg ccggcgcggt gggcgatctc gcgttcgccg cgccagatgc cggtcatgat
      301 ccgtcggccg ggaaagtgga tcggctcgag ggcattgagg cccgcgctcc tgagccagcc
      361 ctggacctga ttgtcggcga aaccgagatg gacatgggca tgctcgcgct tgagctcgac
      421 caggtcgtgc ggcgagaaat cgaccaccag cacgatgccg cccggacgca cgacccgcgc
      481 cgcctcggaa agagcggccg ccggatcgtc ggcgtagtgc agcacgtgat ggatggtgac
      541 gacgtcgaag ctgtcggcct cgaagggcag ggcatacatg tcgccctggc ggatgtcggc
      601 attgtcgatg ccggcgcggg cgaggttggc gcgggccagc gccagcatct cgcgcgactg
      661 gtcgatgcca accgcctgct cgaccttggg cgccagcact tcgagcagcc ggccggtgcc
      721 ggtgccgatg tcgagcagcc ggcgggcgcc gaccggaaga tgatgggcga gcgcccgttc
      781 gatctcgcgg tcggcgacat gcagcgcgcg cagttcgtcc cagcgctggg cattgtcgcg
      841 gaagaagcgc actgccgcgg tctggcgccg ctgctgcagg gcgtcgagcc gggcgcggtc
      901 ggcggcgatg cgggcatgct tggggtcgag ccggcgcacg aactcgcgca ccaggagagc
      961 atcgtcgccc gaggtgacca ggcggaagcg ggtgaactgg gcttcgcgga aacgctccag
     1021 gaggcccgct tcgaccaaaa gcttgagatg gcgggacacg cgcggctggc tctggcccag
     1081 cacatggacg tagtcgctga cggtcaggtc ttcgcgcgcc gccaaggcca ggatgcgcag
     1141 ccgcgtgtct tcggcggcgg cccgcaggag ggtgagaagg tgatccatgg aatgaagaat
     1201 ataagcatat ctttatgtat gcaaggccgt ttagcagagc aaaaattgtg gccgggacgc
     1261 cacaagacgg ccccctcttt gctatgcact tcaaagtgca ggcgccctgt gcgacactgg
     1321 cctttgaaca gcggcgagga gccacgccgc ttggtgcgtt tcggccccgc gttccctggg
     1381 ccggcgaatt ggacgcgggg ttggcgttga tgattgcaag cgtgcccaag tcggtgacgg
     1441 ccggcgttcg ccgttcggct gtgacggctg ccctgattgc aatcctggtg ggtggctgcg
     1501 cgtcgggcga tacgggtgcc gccgaaccct gggacccgat cgagacgccc aaccggttca
     1561 tgtttgcgat caatcgtacc gtcgacatga ttgcgatccg gcccctcgcg gtaatgtatc
     1621 gcgacggggt gccggagcgg gcgcaaaagg gcgtccgcaa cctgctcgac aatctcggcg
     1681 agccggtcac cgccatcaac gaggtcttcc agggtgaccc cagtcgcgcc gccaccacca
     1741 tggcgcgctt cctggtgaat tcgacgctgg gccttgctgg cctgttcgat gtcgccacca
     1801 tgctcggcat gaagcgcacc aaggaagatg ccggccagac catcggtatg tgggcggcca
     1861 aaggcgtcga gccggagaac ggcggcttct acctcgtgct gccgctggtc ggtccttcca
     1921 acgcccgcga cgccaccggc ctgatgatcg actatgccat cgacccgttc caaatcctgc
     1981 cgatcgccct caacgtcgac tggttttact attccgggcc gcgctacgcg ctttccgtca
     2041 tcgactatcg ctcgcgcacc atgttcgccc tcgacgatct cgagaagaac agcgtcgact
     2101 actatgccgc gttgcgttcg gcctacaccc agaaccgcgc cgaactgatc cgcgcgaagc
     2161 gtgagaaaac cgacaccaag ggcgagctcg agcgtcgcga caacctcgcg ctggtcaagt
     2221 aagactccca cgctcagact gcccgcctaa aagtcctagc aaaggagcga acggtgctgc
     2281 tgcttgtctg tcgtcgtgtc gtcctcggcc ttgctgccgg cgctgtcgcc gcgctgctcg
     2341 ccgtctcccc cgccgccgcc gatcccgccg gcgacctgat ccagagcacg gcggtcgagg
     2401 tcatcgacat catcaagagc acaacccccg gggcggcccg ccaagccgcc atccagcggg
     2461 tcctgcagac caggttcgac ttgccctaca tgggccagac agccctggga gcgaactgga
     2521 acaagacaag cgaagcgcag cgcgcccgtt tcctgaaggc cgccgagacc gccgaggcgc
     2581 gcgcttacag cgagcgtttc ggacagtatg gcggccagac cctcgtcgtc gtcaaggtga
     2641 cgagccggcc caacggcgtg tccatcgtcg acagccggct gaaccagagc aacggccagc
     2701 ctctcaagct cgaatgggag gtgcgcgacg ccggccaggg cctgcgcatc accgacgtca
     2761 agatcgaggg tgtcagcatg gtcatgacta gacgttccga tttcaattcc tacattcaga
     2821 acaacggcgg tacggtcgag ccgctgatca acgagctcga agcgcgagcc gcccgctaag
     2881 aggcggcccg ccgattgcac ttgtaatgcg tcagacgtag agttccggcg ggaggcgtat
     2941 cgatcggccc tccggggtta gggatcccgg ccgggtcgaa ggagagcgcc atggatagcg
     3001 cactggtcaa gaatgcggcc gagcctcgct cggtcgatcc ggtctggacg aggattcgcg
     3061 aagcagccca agcggcggcg gccgacgagc cgatcctcgc cgggacgctg catgccacca
     3121 tcctcagcca gcctaaattc gaaagcgctc tcagctatca cctggcgcga ctcgccagca
     3181 ccaccgaggt gcccgcggcc ctgatccgtc aggtgttcga cgaggcgctg agcgccgatc
     3241 cggcgatcgg gctggccgcc cgggccgata tcgttgcggt cgccgagcgc gatcccgcct
     3301 gcacctcgca tctcgacccg ctgctgtggt tcaagggcta tcacgcgctg cagacctcgc
     3361 gcgtggcgca ttggctgtgg aagcagggcc gtcgcacgct cgcgcatttc ctgcagagcc
     3421 gctcgagcgc gctgttcggc gtcgacatcc atcccggcgc ggtgatcggc aagggcatct
     3481 tcatcgacca cggcaccggc gtggtgatcg gcgagaccgc cgtcgtcgag gacggcgtct
     3541 ccatgctgca cggcgtgacg ctcggcggca ccggcaagga gcgcggcgac cgccatccca
     3601 aggtgcggcg cggcgtgctt ttgggcgccg gcgccaaggt gctgggcaat atcgagatcg
     3661 gcgcctgtgc caagatcgcc gccggcagcg tggtgctcga accggtgccc gccggctgca
     3721 cggcggccgg cgtgccggcg cgcatcatcg gctgtgtcga cgtgccggaa ccggcgctcg
     3781 agatggatca gcggatctag gggccgccga cgtccgctgg cttggcgatc ggccagatct
     3841 tcgacatcaa ccagctcacc agcaggccca ccaagcagcc gaacagcact tcgccgacct
     3901 tgtgcaggcc gtgctcgatg gcgctcagct
//
LOCUS       DASWGA010000987         4688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_484385, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000987 DASWGA010000000
VERSION     DASWGA010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4688
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484385"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VF991_22605"
     CDS             <1..433
                     /locus_tag="VF991_22605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559301.1"
                     /translation="SDTPGAAPAMASEATTASLPKADKPPMPAGAKPATAAWSTAPEV
                     PRPTASEVPGNPEAARLMARASLLLRQGDIGAARIVLERAADNGSIPALLALAETYDP
                     VVLSEWGTVGTQGDVAKARDLYSRASAGGVHEAKDRLKALP"
     gene            complement(455..1741)
                     /locus_tag="VF991_22610"
     CDS             complement(455..1741)
                     /locus_tag="VF991_22610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase family protein"
                     /protein_id="HEX9559302.1"
                     /translation="MPAPRPSKTHIGNHALKPETLMLGYGYDPALSEGAVKPPVFLTS
                     TFVFRTAEEGRDFFDYVSGRKQPPAGSGAGLVYSRFNHPNSEIVEDRLAIYEGAEACV
                     LFSSGMSAITTTILAFARPGDVILHSQPLYGGTETLLSRMMAGLGIGAVGFIDGVSEP
                     AVRAAAQEARSKGRVSLILIETPANPTNTLVDIKLLRQIADEIGTAQGFRPILVCDNT
                     LLGPVFQHPLAHGADVSVYSLTKYVGGHSDLIAGATLGSKATIGPIKALRGSIGTQLD
                     PHSCWMLGRSLETLAIRMERSNANARLVAEFLRDHRKVAKVHHLGFLEEGSKAQALYA
                     RQCSGAGSTFSFDIKGGEKEAFAFLNALEVFKLAVSLGGTESLASHPAAMTHSGVPAE
                     VRDRIGVLDTTIRLSVGIEHADDLIADLAQALAATA"
     gene            1930..2334
                     /locus_tag="VF991_22615"
     CDS             1930..2334
                     /locus_tag="VF991_22615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559303.1"
                     /translation="MKFLLAFERRHRVLRAKAAGVIASQDLLDLDNASIAFLAREETA
                     DRPSIRGLYDFSEVAAIAVPQTKAAERGSRSAIVRGQRVMVQSRTIACSLVETFVQSQ
                     RLAGDNLLAVVDSLDEAHALLGLNAPHFEVIG"
     gene            complement(2538..4169)
                     /locus_tag="VF991_22620"
     CDS             complement(2538..4169)
                     /locus_tag="VF991_22620"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9559304.1"
                     /translation="MTTDRPRRFGDLADDIAARLPDREGLVFGASRHTFREVAAQIDE
                     AARRLIAAGVGHGEHVALWLNNSDDWIFIAFAVQKIGAVLVPINTRFRSRDLSYVLAQ
                     SDSVFLITHDRSGPVDYAGMVREAVALPAAGDTVRDPCFPLLRRVILLGQSPQPGTVD
                     WASLAEPAAHVSADHLANRARAVDPTATAFIMYTSGTTGFPKGVVRTHELIRNVEERA
                     ALMAITADDTILNYLPLFHAFGLSEGAWMSLVTGARQILTRGFDPEESLDLIEKERAT
                     IVHGFEAHMKGLAEAQEAKPRDVSSLRTGIFAAGMLSATPVVRRGMRALAPLKNLSGF
                     GMTETWIGVGLSSLDDDETHRSEASGWPGRSYELRIVDDGSGEVLGPGVAGELQVRGW
                     AVMTEYYNKPAETAAAFTEDGWFRTGDAAMWLADGCLRFLGRYKDMLKVGGENVDPME
                     TEGLLLEHPAVQQVAVVGLPDERLGEVAVAYVECRAGATIDADDVVSHCRGKVASFKL
                     PRHVVFVEAFPMTESGKIRKAALREDARRRFAGSG"
     gene            complement(4398..>4688)
                     /locus_tag="VF991_22625"
     CDS             complement(4398..>4688)
                     /locus_tag="VF991_22625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559305.1"
                     /translation="SSPKDFFADPWEPLATTVVAFEGKGGSPMKPLMIAVLAASGLTS
                     ACMATDDKVYFPAQADLQAEARAPKPFFRPDPVNQSVQITGTRITPPTTSSH"
BASE COUNT          801 a         1504 c         1601 g          782 t
ORIGIN      
        1 gtcggatacg ccaggcgcgg cgcccgcaat ggcgagtgaa gccacgaccg cctcgctccc
       61 caaggcggac aagccgccga tgccggcggg cgccaagccg gcgactgcgg cgtggtcgac
      121 cgcgccggag gtgccgcggc cgacggcgtc ggaggtgccc ggcaatccgg aagcggctcg
      181 cctgatggcg cgcgccagcc tgctgctgag gcagggcgac atcggcgcgg cccggatcgt
      241 gctcgagcgc gcggccgaca acggcagcat cccggccctg ctcgcattgg ccgagacgta
      301 cgacccggtc gtcctgtcag agtggggaac cgtcggcacc caaggcgatg tcgcgaaggc
      361 acgggacctc tatagcaggg cgtctgccgg cggcgttcac gaggcgaagg atcgattgaa
      421 ggcgttgccg tagtgacgcc ctccagcaat gaattcatgc ggtcgctgcc aatgcctgcg
      481 cgagatcggc aatcaggtcg tcggcatgct cgatgccgac cgacaagcgg atcgtcgtgt
      541 ccagcacacc gatacggtcg cgcacctcgg ccggaacgcc ggagtgtgtc atggcggcag
      601 gatggctcgc cagcgactcg gtgccgccca ggctgaccgc cagcttgaag acctccagcg
      661 cattgaggaa ggcgaacgcc tccttctctc cgcccttgat gtcgaaggag aaggtggagc
      721 cggcaccgct gcattgccgg gcatagagcg cctgtgcttt cgagccctcc tccaggaacc
      781 ccagatggtg aaccttggcg accttgcgat gatcgcggag aaattcggcg accagcctgg
      841 cgttggcgtt ggaccgttcc atcctgatcg cgagcgtctc gagcgagcgc cccagcatcc
      901 agcaggagtg agggtcgagc tgcgtgccga tgctgccgcg cagcgccttg atcggcccga
      961 tggtcgcctt cgagccaagc gtggcgccgg cgatgaggtc ggagtgaccg ccgacatact
     1021 tggtcagcga gtagaccgag acatcggcgc cgtgggccag gggatgctgg aataccgggc
     1081 ccagcaaggt gttgtcgcac accaggatgg gccggaaacc ctgggccgtt ccgatctcgt
     1141 cggcgatctg ccgcaggagc ttgatatcga ccagcgtatt ggtcggattg gccggcgtct
     1201 cgatcaggat gagcgatacc cgccctttgc ttcgtgcctc ttgcgcggcg gcacgcacgg
     1261 cgggctcgct cacgccgtcg ataaatccga cggcgccgat gccgagacct gccatcatgc
     1321 gtgacaggag tgtttccgtt ccgccgtaga gcggctggga atgcaggatg acgtcgccgg
     1381 gccgggcgaa ggccaggatc gtcgtggtga tcgccgacat gccggatgaa aacagcacgc
     1441 aggcctccgc cccctcgtag atcgcgagcc tgtcctcgac aatctcgctg ttgggatggt
     1501 tgaagcgcga gtagacgagg ccggcgccgc tgcccgcggg cggttgcttg cggcctgaga
     1561 catagtcgaa gaagtcgcga ccttcctcag ccgtgcggaa cacgaaggtc gacgtgagga
     1621 agaccggcgg cttcaccgca ccctccgaca acgccggatc gtagccgtag cccagcatca
     1681 gggtctcggg cttcagggca tggttgccga tatgggtctt ggacgggcgc ggcgctggca
     1741 tggcttgtct cctgtcaccg gggttggcga cgcaggatac tccaggccga ggggccaggg
     1801 catgtgggtg cgctgacggc aggtgattcc ttcagctaat caatacggat aaggtattcg
     1861 gtacacagag ggcgcatcca aaagtatgat aaggcattcg ctgattgcac gaacacggtc
     1921 gcaaaactca tgaagttcct tttggctttc gagcgtaggc atcgggtgct cagggcaaag
     1981 gctgcaggcg tgattgccag tcaagatctg ctggatctcg acaatgcatc gatcgccttt
     2041 ctcgcccgcg aggagacggc agatcggcca tcgattcgcg gcctctacga ctttagcgag
     2101 gttgccgcga ttgcggtgcc gcagacaaag gccgcggagc gcggcagccg ttcggcaatc
     2161 gtgcggggac agcgcgtgat ggtgcaatcc cgaacgatag cgtgcagcct cgtggaaacg
     2221 ttcgtgcaaa gccagagact ggctggagac aatctccttg ccgttgtgga ttcacttgac
     2281 gaagcccatg ctctgctcgg cttgaacgcg ccgcacttcg aagtcattgg gtagcgaaga
     2341 cgagaccacc gcttcgcatg atgaggtcat tgcggcacgg gcgccgacca tggcgaccgt
     2401 gcctgacctc gtgccggatg gcgcgttttc tcatgctcat tcggaccgcg agcctctggc
     2461 tcgctcatga tcatgagcga gccagaggct cgcggtccgg aagactatga cgcgccactg
     2521 gagtggcgca cccccagcta gccggacccc gcgaatcgcc tgcgggcgtc ctcgcgcaga
     2581 gcggccttcc tgatcttgcc cgattcggtc atcggaaagg cttcgacgaa caccacatgc
     2641 cgcggcagct tgaagctggc gaccttgccg cggcagtggc tgaccacgtc gtcggcgtcg
     2701 atcgtggccc ccgctctgca ctcgacatag gccacggcga cctcgcccag gcgctcgtcg
     2761 ggcaggccga ccacggcgac ctgctgcacg gcggggtgtt ccagcagcaa cccctcggtc
     2821 tccatcgggt cgacgttctc gccgccgacc ttcagcatgt ccttgtagcg accgaggaag
     2881 cggagacagc cgtcggccag ccacatcgcc gcgtcgccgg tgcggaacca gccgtcctcg
     2941 gtgaaggcag ccgcggtctc ggccggcttg ttgtagtact ccgtcatcac cgcccagccg
     3001 cgcacctgca gctcgcccgc cacgcccggc cctaaaacct cgccgctgcc gtcgtcgacg
     3061 atgcgcagct cgtagctccg gccgggccag cccgatgcct cgctgcgatg ggtttcgtca
     3121 tcgtcgagcg acgacaggcc gacgccgatc cacgtctcgg tcatgccgaa gccgctgagg
     3181 ttcttgagcg gcgccagcgc ccgcatgccg cggcgcacga ccggcgtggc gctcagcatg
     3241 ccggcggcga agatccccgt gcgtaagctg gagacatcgc gcggcttggc ctcctgcgcc
     3301 tcggcgagac ccttcatgtg cgcctcgaag ccgtggacga tggtcgcgcg ctccttctcg
     3361 atcaggtcga gactctcctc gggatcgaag ccgcgcgtga ggatctgccg cgccccggtg
     3421 accagcgaca tccacgcccc ttccgacagg ccgaaggcgt ggaacagcgg caggtagttc
     3481 aggatggtgt cgtcggccgt gatggccatc agcgcggcgc gttcctcgac gttgcggatg
     3541 agctcgtgcg tgcgcaccac gcccttgggg aatcccgtcg tgcccgaggt gtacatgatg
     3601 aacgccgtcg ccgtcggatc gacggcgcgg gcgcggttgg ccagatgatc ggcggagacg
     3661 tgggccgccg gctcggcgag cgaggcccag tcgacggttc cgggctgcgg cgattggccg
     3721 agcaggatga cgcgccgcag caacggaaag cagggatcgc gcacggtatc gccggcggcc
     3781 ggcagggcga cggcttcgcg caccatgccg gcatagtcga ccggcccgga acgatcgtgc
     3841 gtgatcagga aaacgctgtc ggactgcgcc aggacgtacg acagatcgcg cgagcggaag
     3901 cgcgtgttga tcggcacgag caccgcgccg atcttctgga cggcaaaggc gatgaagatc
     3961 cagtcgtcgc tgttgttgag ccacaaggcg acatgctcgc cgtggccgac gccggcggcg
     4021 atcaggcggc gcgccgcctc gtcgatctgc gccgcaacct cgcgaaacgt atggcgcgat
     4081 gccccgaaca ccagcccctc gcggtccggc aggcgggcgg cgatgtcgtc cgcaagatcg
     4141 ccgaagcggc gtgggcgatc tgtcgtcatg gcaggtcgtc tcccttgtcc ccctggtcgc
     4201 agtttgtcgg tgagcgcgcg ggatagccac tggcaaagtg acaagcgtgg tctcgcaggg
     4261 ccgcgacgcc agcaaagtgc ttgcgctgca cagagcaaca cgcgacgccc gctcctcttg
     4321 ccacggcgct caagccaacc gctcggcgcg gcgagcacgc gcgccactac gatgggagtt
     4381 ggttggggat cgccggctta gtgcgaggaa gtggtcggtg gggtgattct cgttccggtg
     4441 atctggaccg attggttcac ggggtcaggt cgaaagaacg gcttgggcgc gcgggcctcg
     4501 gcttgtagat cggcctgtgc ggggaaatag accttgtcgt ccgtggccat gcaggcgctg
     4561 gtcagtccac tcgccgcgag gacggcgatc atgagaggct tcatgggcga acctcctttt
     4621 ccctcaaacg caacgaccgt cgtcgccagc ggttcccatg gatcggcgaa aaagtccttt
     4681 ggcgatga
//
LOCUS       DASWGA010000988         5048 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2024210, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000988 DASWGA010000000
VERSION     DASWGA010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5048
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2024210"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2479)
                     /locus_tag="VF991_22630"
     CDS             complement(<1..2479)
                     /locus_tag="VF991_22630"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HEX9559306.1"
                     /translation="MRLERRYTQAGKSPFAGMAFHAVDSEIRNPDGSIVFQLNSIDVP
                     AEWSQVAADILAQKYFRRAGVPARLIRIAEADVPQWLWRAVPDEAALAELAPGDRFGG
                     EHSAAQVFHRMAGAWTYWGWKGGYFDSEDDARTFYDEHCYMLAAQICAPNSPQWFNTG
                     LHWAYGIDGPGQGHWFVDHRDGIAYPSSSAYERPQPHACFIQSVDDDLVNEGGIMDLW
                     VREARLFKYGSGTGSNFSALRGEGERLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRR
                     AAKMVSVDIDHPDIEDFIAWKMREEQKVAALVAGSRLANRHLNAVMRACLDGEMDGEA
                     AFDPRQNPKLRREIVAARGAELPENYIQRVIQFARQGYRHIEFPAFDTDWESEAYLTV
                     SGQNANNSVRVTDAFLHAVEADRQWALTERTTGKVAKTVSARALWDSIAEAAWHSADP
                     GVQYDTTINDWHTCPESGRINASNPCSEYMFLDDTACNLASLNLVRFRSTDGSLDVGA
                     LEHATRLWTVVLEISVMMAQYPSRRIAELSYQYRTLGLGYANLGALLMASGLGYDSAR
                     GRAIAGAVTAVMTGAAYATSAEMARFMGPFPGFAANREAMLRVIRNHRRAAHGEAAGY
                     ESLAIAPVALDTAHCPDAPLVAAAKQVWDRALALGEQHGFRNAQVSVIAPTGTIGLVM
                     DCDTTGIEPDFSLVKFKKLAGGGYFKIINQTVPEALRTLGYDEAAIARIVAYAVGHGS
                     LAKAPAINPETLAARGFDDGTIERVEKSIGTAFDIRFAFSRYTLGDEFLRDTLGISQK
                     QLDSTGFDVLTALGFTRTQIDEANLFVC"
     gene            2780..3130
                     /locus_tag="VF991_22635"
     CDS             2780..3130
                     /locus_tag="VF991_22635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0010257 - NADH dehydrogenase complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone oxidoreductase subunit NDUFA12"
                     /protein_id="HEX9559307.1"
                     /translation="MTFGTWLFTKMRGELVGTDAEGNRYYQEKRPIPGRRRKRWVMYN
                     GIVEASRVPPDWDGWLHHTTDAVPPPGGLPRQSWQKEHVANLTGTDLAYRPPGHTLAV
                     GDKPKPPYEAWRPG"
     gene            3157..3606
                     /gene="mlaD"
                     /locus_tag="VF991_22640"
     CDS             3157..3606
                     /gene="mlaD"
                     /locus_tag="VF991_22640"
                     /inference="COORDINATES: protein motif:HMM:TIGR04430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HEX9559308.1"
                     /translation="MGRNIIETIVGALVLLVAGVFVFYAFAKSDRNGPSGYDIIARFG
                     RVDGLKRGADITLSGVKIGTVTAVDLDRKTYQAVVHMAVASNVDLPIDTNAKIVSESL
                     LGGLVVVLEPGGDKQMIKNGGEIDKTQDAISLTELIAKMMYGSVNKP"
     gene            3603..3833
                     /locus_tag="VF991_22645"
     CDS             3603..3833
                     /locus_tag="VF991_22645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559309.1"
                     /translation="MKAQSSKTPPTWRQADGKPVSCLEKIKVLNQNIQEIESLCADAL
                     EDGVLMGCDVDQIKAALHELIDGLEAPHTDKK"
     gene            3836..4282
                     /locus_tag="VF991_22650"
     CDS             3836..4282
                     /locus_tag="VF991_22650"
                     /inference="COORDINATES: protein motif:HMM:NF021444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2155 domain-containing protein"
                     /protein_id="HEX9559310.1"
                     /translation="MRALLAIAALAAAIGAAAAQAQPAAAPPGNANLRPIPDGVGKRV
                     AELQGLDKVTARTQRFYAPVGQATRFGTLEITVGDCLVNVPEAPPESVAYLTIIDHKP
                     GQAAEKLFAGWMFASTPSLSALDHGVYDVRVLACTMAQGSAPPSSR"
     gene            complement(4219..4869)
                     /gene="aat"
                     /locus_tag="VF991_22655"
     CDS             complement(4219..4869)
                     /gene="aat"
                     /locus_tag="VF991_22655"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEX9559311.1"
                     /translation="MLEITPELLLQAYRIGVFPMGERRDDPKLYWLDPRLRAVLPLDG
                     FHLPQRLARTIRAGRFEVSADTAFADIVRACAEPRPGHPESWINAPIVELYSELHRRG
                     HAHSVECRIDGRLVGGLYGVSVGAAFFGESMFSRERDASKVALVHLVARLIKGGFRLL
                     DCQFMTEHLRSFGAVEIAREEFRALLAEAIDGTASFQRELGGADPCAIVQASTRTS"
BASE COUNT          882 a         1634 c         1710 g          822 t
ORIGIN      
        1 cgcaaacgaa taggttggct tcgtcgatct gcgtccgcgt gaagccgaga gccgtcagca
       61 cgtcgaagcc cgtggaatcg agctgcttct gcgagattcc caaagtatcg cggaggaact
      121 cgtcgcccag cgtgtatcgc gagaaggcga agcggatgtc gaaggcggtg ccgatcgact
      181 tctcgacccg ttcgatcgtt ccgtcatcga aaccgcgcgc cgccagcgtc tcgggattga
      241 tcgccggcgc cttggcgagc gagccatggc ccaccgcata ggcgacgatg cgggcaatcg
      301 ccgcctcgtc gtaacctagc gtgcgcagcg cctccgggac ggtctggttg atgatcttga
      361 agtagccgcc gcccgccagc ttcttgaact tgaccagcga gaagtcgggt tcgatgccgg
      421 tggtatcgca atccatcacc aggccgatcg tgccggtggg ggcgatcacg gagacctggg
      481 cattgcggaa gccgtgctgc tcgcccaggg cgagcgcacg gtcccacacc tgcttggctg
      541 cggcgacgag gggggcgtcg gggcagtgcg ccgtgtcgag cgcgaccggc gcgatggcaa
      601 ggctttcgta gcccgccgcc tcgccatggg cggcgcggcg gtggttgcgg atgacccgca
      661 gcatggcctc gcggttggcg gcgaagccgg ggaaggggcc catgaagcgc gccatctcgg
      721 ccgacgtggc gtacgccgcg ccggtcatga cggcggtcac ggcgccggcg atcgcccggc
      781 cgcgggcgct gtcatagccc aggcccgacg ccatcaggag cgcgccgaga ttggcgtaac
      841 ccaggccgag cgtgcggtat tggtacgaca gctcggcgat gcggcgcgac gggtactgcg
      901 ccatcatcac cgagatttcc agcacgacgg tccacagccg cgtcgcatgc tcgagcgcgc
      961 cgacatcgag cgagccgtct gtactgcgga accgcaccag gttcagcgac gccagattgc
     1021 acgccgtgtc gtcgaggaac atgtactccg agcacgggtt ggaggcgttg atgcgtccgg
     1081 actcggggca ggtgtgccag tcgttgatcg tcgtgtcgta ctgcacgccg gggtcggccg
     1141 aatgccacgc cgcctcggcg atgctgtccc acagcgcccg cgcgctcacg gtcttcgcga
     1201 ccttgcccgt ggtgcgctcg gtcagcgccc attggcggtc ggcttcgacc gcgtgcagga
     1261 aggcgtcggt gacgcgcacc gagttgttgg cgttctggcc cgacacggtc aggtaggctt
     1321 ccgactccca atcggtgtcg aaggccggga actcgatgtg gcgatagcct tggcgggcga
     1381 actggatgac ccgctggatg taattttccg gcagttcggc cccgcgggcg gcgacgatct
     1441 cgcgacgcag cttgggattc tgcctgggat cgaaggcggc ctcgccgtcc atctcgccgt
     1501 cgaggcaggc gcgcatcacg gcgttgagat ggcggttggc gagccgggag ccggcgacca
     1561 gcgccgcgac cttctgttcc tcgcgcatct tccaggcgat gaagtcctcg atgtcgggat
     1621 ggtcgatatc gaccgaaacc atcttggccg cccgccgcgt cgtgccgccc gacttgatgg
     1681 cgcccgccgc acggtcgccg atcttgagga atgacatcag gccggacgac cggccgccgc
     1741 ccgacaggcg ctcgccctcg ccgcgcaagg ccgagaagtt ggaacccgtg ccggagccgt
     1801 acttgaacag gcgcgcctcg cgcacccaga ggtccatgat gccgccctcg ttcaccaggt
     1861 catcgtcgac gctctggatg aagcaggcgt gcggctgcgg ccgctcgtag gcggacgagg
     1921 agggataggc gatcccgtcc cgatggtcga cgaaccaatg gccctgcccc ggaccgtcga
     1981 tgccgtaggc ccaatgcagg ccggtattga accattgcgg cgagttcggc gcgcagatct
     2041 gcgccgccag catgtagcag tgctcgtcgt agaaggtgcg ggcgtcatcc tcgctgtcga
     2101 agtagccgcc cttccagccc cagtaggtcc aggcgccggc catgcgatgg aagacttggg
     2161 ccgcactgtg ctcgccgccg aagcggtcgc ccggcgccaa ctcggcgaga gcggcttcat
     2221 cgggcaccgc gcgccacagc cattgcggta cgtcggcttc ggcgatcctg atcagtcgcg
     2281 cgggcacgcc ggcacggcga aaatattttt gcgcgaggat gtcggcggcg acttgcgacc
     2341 actcggccgg cacgtcgatg ctgttcagtt gaaagacgat cgaaccgtcg ggattgcgga
     2401 tttcggaatc gacagcatga aacgccattc ctgcgaacgg tgattttcct gcctgcgtat
     2461 accgacgctc caagcgcatc gacgatcccc cgtgcccaat tcccgtcatt tatgtcctgt
     2521 gcggggagtg ctcggtcgcg atcgagcacg tacatatagg caccaagtga tagtaaatta
     2581 caaaatcttg tgtgcgcaac tacattttgt agaccaatgt gttgatgata ctagatgatg
     2641 caagcgcgca acaggtcatc gaatcgggtg attcgcatgc cgacgaacga tgtgaacagc
     2701 tccgccgatc gcgtcgcgtt gcgcgcgctg aagcgcccgc gtacaagcgg cgcggtcaca
     2761 ctccaagcgt ggtttgctca tgactttcgg cacctggctt ttcaccaaga tgcgcggcga
     2821 actcgtcggc accgatgccg aaggcaatcg ctactaccag gagaagcgcc cgattcccgg
     2881 ccgtcggcgc aagcgttggg tgatgtacaa tggcatcgtc gaagcctcgc gcgtgccacc
     2941 cgattgggac ggctggctgc atcacacgac cgacgcggtg ccgccgcccg gcggcttgcc
     3001 gcgccaatct tggcagaagg aacacgtggc caacctcacc ggcaccgacc ttgcctaccg
     3061 tccgcccggc cacacactcg ccgtcggcga caagcccaag ccgccctatg aggcgtggcg
     3121 tccgggctga gatgcgcgag cacgaggaga cagggcgtgg gtcgtaatat catcgagacg
     3181 atcgtgggcg cgttggtgct gctggtggcc ggcgtgttcg tgttctatgc cttcgccaag
     3241 tcggaccgca acgggcccag cggctatgac atcatcgccc gtttcggtcg cgtcgacgga
     3301 ctgaagcgcg gcgccgacat taccttgagc ggcgtgaaga tcggcacggt cacggccgtc
     3361 gacctcgacc gcaagaccta ccaggcggtc gtgcatatgg cggtggcgtc gaacgtcgac
     3421 ctgccgatcg ataccaacgc caagatcgtg agcgagtcgc tactgggcgg cctggtcgtg
     3481 gtgctcgagc ctggcggcga caagcagatg atcaagaacg gcggggagat cgacaagacg
     3541 caggacgcca tctcgctcac cgaactgatc gccaaaatga tgtacggaag cgtcaacaag
     3601 ccatgaaagc acagtcctcc aaaacgccgc cgacctggcg gcaagccgac ggcaagccgg
     3661 tgtcctgcct cgaaaagatc aaagtcctga accagaacat ccaggaaatc gagagcctct
     3721 gtgccgatgc gctggaggac ggagtcctga tgggatgcga cgtcgatcag atcaaggcag
     3781 ccctgcacga gctgatcgac gggctcgagg caccccacac cgacaagaag tgagcgtgcg
     3841 cgccctgctg gccatcgcgg cgctggcagc cgccatcggc gccgccgcgg cgcaagccca
     3901 gccggctgcc gcgccgcccg gcaacgccaa tctgcggccg attccggacg gcgtaggcaa
     3961 gcgggtcgcc gagctgcaag ggctcgacaa ggtgacggcg cgcactcagc gcttctatgc
     4021 tccggtcggc caggcgaccc gcttcggcac gctcgagatc acggtgggcg actgcctggt
     4081 caacgtcccg gaggcgccgc cggagtcggt ggcctatctc accatcatcg accacaagcc
     4141 tggccaggcc gcggagaagc tgttcgcggg ctggatgttc gcctcgacgc cgtcgctgtc
     4201 ggcgctcgat catggcgtct acgacgtgcg ggtgctcgcc tgcacgatgg cacagggatc
     4261 ggcgccgccg agctcgcgct gaaagctcgc cgtgccgtcg atcgcctcgg ccaagagggc
     4321 gcggaactcc tcgcgcgcga tctcgaccgc gccgaagctg cgcagatgct cggtcatgaa
     4381 ctggcaatcg agcaggcgga agccgccttt gatcagccgt gccacgagat ggaccagcgc
     4441 caccttcgag gcgtcgcgtt cgcggctgaa catgctctcg ccgaagaacg ccgcgccgac
     4501 cgagacgccg tagagcccgc cgaccagccg gccgtcgatc cggcattcga cgctgtgggc
     4561 gtggccgcgc cggtgcagct cgctatagag ctcgacgatc ggcgcgttga tccagctctc
     4621 gggatggccc ggccgcggct cggcgcaggc gcgcacgatg tcggcgaagg cggtgtcggc
     4681 gctgacctcg aagcggccgg cgcggatggt gcgggccagt cgctgcggca ggtggaagcc
     4741 gtcgagcggc aggacggcgc gcaggcgggg atcgagccaa tagagcttgg gatcgtcgcg
     4801 ccgctcgccc atcgggaaga cgccgatgcg ataggcctgc agcagtagtt cgggcgttat
     4861 ttccagcatg cgtagcgctg ggggcgcgcg acagggcgct tgtaaccaag cgccgtagtc
     4921 gcgcggttgg accggcacca agaaagatca cgccattcgc ggcggagtaa cctccgcctt
     4981 ggtggcgcgc ccccagcaaa gagcgaggtc gtcggcatgc ttacgagggt atcctacttc
     5041 ttcaggcc
//
LOCUS       DASWGA010000989         3439 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_356087, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000989 DASWGA010000000
VERSION     DASWGA010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3439
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356087"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..1349)
                     /locus_tag="VF991_22660"
     CDS             complement(57..1349)
                     /locus_tag="VF991_22660"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEX9559312.1"
                     /translation="MANVAVIGAQWGDEGKGKIVDWLSERAEVVVRFQGGHNAGHTLV
                     TGNQTYKLALLPSGVVRQGKLSIIGNGVVVDPWHFLEEVKKVSSQGVSVTPDNLKIAN
                     HAVLILPLHRDLDGWREDVPGTIKIGTTRRGIGPAYEDKVGRRAIRVGDLGEPDYLVK
                     KVDTLLAHHNALRQGLGRPTVDPKALLADLLALAPKILPFAEDVWERLDGLRAAGKRI
                     LFEGAQATMLDVDHGTYPFVTSSNTVAAQAMIGSGLGNGAVGYVLGIAKAYTTRVGNG
                     PFPTELSDQIGQLLGDRGNEFGTNTGRRRRCGWFDAVMVRQAVKLSGIDGIALTKLDV
                     LDGLTEIKVCVGYELDGKRIERFPFTMGAQAKLKPVWETFEGWGESTRGARSFAELPA
                     TCIKYVRRIEELVGCPVALLSTSPEREDTILMTDPFRD"
     gene            1599..1850
                     /locus_tag="VF991_22665"
     CDS             1599..1850
                     /locus_tag="VF991_22665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559313.1"
                     /translation="MTNAMAIEVGRKPRRRGLSTRQKASSLFRLWHSIQDIKEDAEHM
                     NDEELALLVGMIELLVEERAAGLGRRGAALAGADTTRPN"
     gene            complement(1903..3084)
                     /locus_tag="VF991_22670"
     CDS             complement(1903..3084)
                     /locus_tag="VF991_22670"
                     /inference="COORDINATES: protein motif:HMM:NF024785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEX9559314.1"
                     /translation="MTANDNNHRGLLPAGLADLLPPDAAREAHAIGVAIERFAAFGYE
                     RVKPPLVEFEESLLGGPGAALASQTFRLMDPVSQRMMGVRPDMTVQVARIAVTRLKHE
                     PRPLRLSYGGNVIRVRGGALKPERQFAQVGTELIGVDSAQADAEAVLLAVDALRAIGV
                     ADLTVDLNLPTLVTAVGTGLKLSADTLRRTRRALDRKDEGGLAKALGEDKKGDAGKAA
                     DLFVGLLRAAGPAERCIAKLTAMKLPAAAAAEAARLAEVLKLLRAADEDLPMTIDPVE
                     YRGLEYQTGVSFSVFAQKGRQELARGGRYSAGYPEDGVSEPATGFTLYMDAVLAASEA
                     APERPRLFLPPGTPWRDGAPWQAKGYAVVRGVTAVDDPRTEARRLRCSHALIDDEAVP
                     L"
BASE COUNT          527 a         1170 c         1197 g          545 t
ORIGIN      
        1 gagggggttg cgacgcccgt gcgcaatacc tgccgcgcgg gcgcgtatga acgcgcctaa
       61 tccctgaacg gatccgtcat caggatcgtg tcctcgcgct cggggctggt gctgagcagc
      121 gccaccgggc agccgactag ctcctcgatg cggcgcacgt acttgatgca ggtcgccggc
      181 agctcggcga aggagcgtgc gccgcgtgtg ctctcgcccc agccctcgaa ggtctcccac
      241 accggcttga gcttggcctg ggcgcccatg gtgaagggga agcgctcgat ccgcttgccg
      301 tcgagctcgt agccgacgca gaccttgatt tccgtcagcc catcgagcac gtcgagcttg
      361 gtgagcgcga tgccgtcgat gccgctcagc ttcaccgcct ggcgcaccat gacggcgtcg
      421 aaccagccgc agcgccggcg ccggccggtg ttggtgccga actcgttgcc gcggtcgccc
      481 aaaagctggc cgatctggtc gctgagctcg gtcgggaagg ggccgttgcc gacccgcgtg
      541 gtgtaggcct tggcgatgcc cagcacgtag ccgaccgcgc cgttgcccag gccgctgccg
      601 atcatggcct gcgccgccac cgtgttggac gaggtgacga acgggtaggt gccgtgatcg
      661 acgtcgagca tggtggcctg cgcgccctcg aacaggatgc gcttgccggc ggcgcgcagg
      721 ccgtccagcc gctcccacac atcctcggcg aagggcagga tcttgggcgc cagcgccagc
      781 aggtcggcca gcagggcctt cgggtcgacc gtcggccggc ccagcccctg gcgcagggcg
      841 ttgtgatggg cgagcagggt gtcgaccttc ttcacgagat agtccggctc accgagatcg
      901 ccgacgcgaa tcgcgcggcg gccgaccttg tcctcgtagg ccggcccgat gccgcgccgc
      961 gtcgtgccga tcttgatggt ccccggcacg tcctcgcgcc agccgtcgag gtcgcggtgc
     1021 agcggcagga tcagcacggc gtggttggcg atcttgagat tgtcgggcgt caccgacacg
     1081 ccctggctcg acaccttctt cacctcctcg aggaagtgcc agggatcgac cacgacgccg
     1141 ttgccgatga tcgagagctt gccctggcgg accacgcccg agggcagcag cgcgagcttg
     1201 taggtctggt tgccggtgac cagggtatgg ccggcattgt ggccgccctg gaaacgcacc
     1261 accacctcgg cgcgttcgct cagccaatcg acgatcttgc ccttgccctc gtcgccccac
     1321 tgggcgccga tcactgccac gttggccatt gcctgtcctg gggtcggcgt tcacgcacga
     1381 aaacgcctcc ccgggccgac tggcttcaat cggcccggag aggcgtgagt ttgcttagca
     1441 cgcgggaggg aggaacacga aggaaaacct tcgcccgcgt ccacggcata aatagtcgaa
     1501 tcaatcctac cgttatgtgc gttttgccac cgagcggcgg cgcgaaatgc ggtcttctcc
     1561 ctatcgcggt cacaggccga ccgccgagga gggggcaaat gaccaacgca atggctatcg
     1621 aagttgggcg caagccgcgc aggcgcggcc tttcgaccag gcagaaggct tccagcctgt
     1681 tccgtctgtg gcacagcatc caggacatca aggaagacgc cgagcatatg aacgacgagg
     1741 aactcgccct gctggtcggc atgatcgaac tgctggtcga ggagcgggcg gccggcctcg
     1801 gccgccgggg cgcggcgctg gccggggccg acacgacgcg gccgaactag gcgggacgac
     1861 ccacgctgcg ttggggcgcg gacttggggt gcgcgccccc ggctacagcg gcacggcctc
     1921 gtcgtcgatg agggcgtggc tgcagcgcag ccgtctcgct tccgtgcgcg gatcgtccac
     1981 cgctgtgacg ccgcgcacca cggcatagcc tttggcctgc cagggcgcgc cgtcgcgcca
     2041 cggcgtgccg ggcggcagga agagtcgcgg ccgttccggc gccgcctccg aggcggcgag
     2101 aacggcatcc atgtaaagcg tgaagccggt cgcaggctcg ctcacgccat cctcgggata
     2161 gccggcggaa tagcgcccgc cgcgcgccag ctcctggcgg cccttttgcg cgaacaccga
     2221 gaacgacacg ccggtctgat attcaaggcc gcgatattcg acgggatcga tcgtcatcgg
     2281 caggtcctcg tcggcggcgc gcaaaagctt caagacctcg gcaagccgcg ccgcttcggc
     2341 cgccgccgcc gccggcagct tcatggcggt caacttggcg atgcagcgct cggccgggcc
     2401 ggccgcgcgc aacaggccga cgaacaggtc ggcggccttc ccggcgtcgc ccttcttgtc
     2461 ttcgccgagg gccttggcga ggccgccttc gtccttgcgg tcgagcgcgc ggcgggtgcg
     2521 gcgcaaggtg tcggcggaca gctttaggcc ggtgccgacg gccgtcacca aggtcggcag
     2581 gttgagatcg acggtaaggt cggccacgcc gatggcgcgc agcgcatcga ccgccagcag
     2641 cacggcctcg gcatcggctt gggccgaatc gacgccgatc agctcggtgc cgacctgggc
     2701 gaactggcgc tcgggcttca gcgcgccgcc gcgcacgcgg atgacgttgc cgccgtagga
     2761 caggcgcagc ggccgcggtt cgtgcttcag ccgggtcacg gcgatgcggg cgacctgcac
     2821 ggtcatgtcc ggccgcacgc ccatcatgcg ctgcgacacc ggatccatga ggcggaaggt
     2881 ctgcgaggcg agcgccgcgc ccgggccgcc gagcagcgat tcctcgaact cgaccagcgg
     2941 cggcttcacc ctttcgtagc cgaaagccgc gaagcgctcg atggcaactc cgatggcgtg
     3001 cgcttcgcga gccgcgtcgg gcggcagcag atcggccagc ccggccggca gcaggccgcg
     3061 atggttgttg tcgttggcag tcatggaagg gttgatagct cataaccctc ccccgtcata
     3121 cgggtctgcg ttttggcccc tcgggccaaa acgcacaggt ggcccgcagg gccggagggg
     3181 gagggccgca aactgaagcg cgggcgagtt tcaggtcatg aatttgatca tgaatacggt
     3241 ggaaatctcc cctgttgcct tccccctccg tccccttcgg gggcacctcc cccgattacg
     3301 gggggaggaa ggctggcggc cgcgaaggac aacggttatt gctcccagcg atgaccaaga
     3361 ctgctcgccc ggcgctttcc gtggtggccc cttgctacga tgagcaggat gccctgcccg
     3421 agttcgtgcg ccgcgtcgg
//
LOCUS       DASWGA010000990         4624 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1513643, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000990 DASWGA010000000
VERSION     DASWGA010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4624
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513643"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VF991_22675"
     CDS             complement(<1..454)
                     /locus_tag="VF991_22675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018244034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX9559315.1"
                     /translation="MQTLRTLEALEREGLVANDPRLAAAAEAMAIAVTPEMLALIDRS
                     DPARDPIARQFVPSAAETEVSSDELADPIGDEARSPVKGIVHRYPDRVLLKPLHVCPV
                     YCRFCFRREKVGPGGEALTAAELAAALAYIRARPEIWEVILTGGDPLML"
     gene            691..1590
                     /locus_tag="VF991_22680"
     CDS             691..1590
                     /locus_tag="VF991_22680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9559316.1"
                     /translation="MSITTARRPIFGEQQRFMLFLIAPAALLLGLFQVVPIVIGANAS
                     FRNWALYNPKKDWIGLDHYRAVITDPAFLEVVLPNTFVFMVLSVAGSLVLGLALALLL
                     NRPFAGQKLVQTVLLVPLMVAPVIAAIMMRWMFNDQFGIVNAVLEGLGLEGQPWLVER
                     WSAFGVILLTDIWLWTPWFTLLLLAGLQSLPREPFEAAAIDGTSAWRVFSHLTLPMLR
                     PVIVVCVVIRAIDAFRTFDIVWTLTGGGPGRSTELFSLYAYVLAFLNLDFGRGSAAAI
                     IGGLIILVVGIGLYRLVDRIAKA"
     gene            1599..2429
                     /locus_tag="VF991_22685"
     CDS             1599..2429
                     /locus_tag="VF991_22685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9559317.1"
                     /translation="MVRTPLMFARLPAGSRRALFALALGGICFAFAFPVLWLILTSLR
                     PESGVYYVHRGTEFTLASFAEVLRDERLVQAFVNSALIATLATVFSLLVTVSSGYMLS
                     RFRGPAASTWFGTIYVFRCVPYISWVLPLYFVTQSWGIYDTYIGLLLPHIAVHICFFS
                     WLMKGFFDGIDPSMEHAALIDGCTRWGAFLRVALPSAIPAIAALAVLCWLFTWNEFLF
                     ALILTGNRVPVITVVMAQFVTEMGLRWNLMAATAVMALVPAFLLALFGQKYVIRGLRI
                     "
     gene            2480..3769
                     /locus_tag="VF991_22690"
     CDS             2480..3769
                     /locus_tag="VF991_22690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9559318.1"
                     /translation="MGRRTIAAAAAAAGLLAASGAYAQAVKELRIGYQPSPLQDASVA
                     MFETWGAKNGVKIVKVPNSYGVYVEKMTASLTSNSDQYDVIWHNDDWGQLWAHLLEPT
                     DDIPGLQFAEKWGMDKVVFGNAQGQNTVVPMGQTFSVFFYRTDLLQPNEVPKTQAEVV
                     EVSKKLQAANKVKWGYVGGMSMNHTWFTWFWSMWGNNCDVLMPFYERDNKVLAQNGWK
                     SSLNEPCMKQTVEYWWDAINTHKISPRGMPAYDRTEANAIFTSGDAAFTVADSLWWGS
                     FNDPAKSKVAGKIAAARFPLGPNRTKNFAWDDIWGWAIPKSISPERKKLAKEMLAAMM
                     VDEEGQMKLWKATGAPPPNTQFWPKIAAQDPFMKLLKEAALDSPDKVRGAYYFAQWPA
                     VHKAFNDAVTKAVTGKREDIAKVLSENAPLVSKAAQQ"
     gene            3944..>4624
                     /locus_tag="VF991_22695"
     CDS             3944..>4624
                     /locus_tag="VF991_22695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9559319.1"
                     /translation="MAAIVLIKLNKHYGSLHHAVKDVDLSIADREFVALVGPSGCGKS
                     TTLRMIAGLEDISSGEIRIGERVVNHLPPRDRDVAMVFQNYALYQHMSVYDNLAFGLR
                     NKKMPERDIKAAIDRAAEMLGLHDLLKRRPRQLSGGQQQRVALGRCIVRNPLVFLFDE
                     PLSNLDAKLRAQMRIEIKRLHAQLPTTSVFVTHDQVEAMTLGDRVVVMRDGRVQQAGT
                     PLVVYNNPV"
BASE COUNT          796 a         1528 c         1494 g          806 t
ORIGIN      
        1 ccagcatcag cggatcgccg ccagtcagga tcacttccca gatttccggc cgggcgcgga
       61 tataggccag cgccgccgcg agctcggccg cggtcaaggc ctcgccgccg ggcccgacct
      121 tctcgcggcg aaagcagaac cggcaataga ccgggcagac atgcaacggc ttcagcagca
      181 cgcggtcggg atagcgatgc acgatgccct tcaccggcga gcgcgcctca tcgccgatcg
      241 gatcggccag ctcgtcggac gagacctcgg tttcggcggc gctcggcacg aattggcggg
      301 cgatcggatc gcgcgcggga tcgctgcggt cgatcagcgc cagcatttcc ggcgtgacgg
      361 cgatcgccat ggcctcggcc gccgccgcga ggcgcggatc gttggcgacc agcccctcgc
      421 gttcgagggc ctccagagtg cgcaaggtct gcatgacgcg cccaaatagc tcgaaacgcg
      481 ccttccaacc agttcggaaa accaccatca tcgggcaaga caaacaaccc atgttcctct
      541 cccctcagcg ccttcacagg cgcgactagg gggagaggct aggtgagggg caatcgacgt
      601 gcgtggcccc ctcacccaac ctctccccct cagcgccttc agaggcgcgc cgggggagag
      661 gagcgtaaag acaaaggggt gaggggagca ttgagcatca cgacggcgcg gcgtcccata
      721 ttcggcgagc agcagcgctt catgctgttt ttgatcgcgc ccgccgcgct gctgctgggc
      781 ctgttccagg tcgtgccgat cgtgatcggc gccaatgcca gcttccgcaa ctgggcgctc
      841 tacaatccga agaaggactg gatcggcctc gaccactatc gcgccgtgat caccgatccg
      901 gcgttcctcg aagtggtcct gcccaacacc ttcgtcttca tggtgctgag cgtggccgga
      961 tcgttggtcc tgggtcttgc gctggcgctg ctgctcaacc gcccgttcgc cggccagaag
     1021 ctggtgcaga ccgtgctcct ggtgccgctg atggtggcgc cggtgatcgc cgccatcatg
     1081 atgcgctgga tgttcaacga ccagttcggc atcgtgaacg ccgtgctcga ggggctgggg
     1141 ctcgagggcc agccctggct ggtcgagcgc tggagcgcct tcggcgtcat cctgctgacc
     1201 gacatctggt tgtggacgcc gtggttcacc ctgctgctgc tggccggcct gcagagcctg
     1261 ccgcgcgagc cgttcgaggc cgccgcgatc gacggcacgt cggcgtggcg ggtgttcagc
     1321 catctcacgc tgccgatgct gcggccggtg atcgtggtct gcgtcgtgat ccgcgccatc
     1381 gacgccttcc gcaccttcga catcgtatgg accctgaccg gcggcggccc ggggcgctcg
     1441 accgagctgt tcagcctcta cgcctacgtg ctggccttcc tcaatctcga tttcggccgc
     1501 ggctcggcgg cggcgatcat cggcggcctc atcatcctgg tggtcggcat cggcctgtat
     1561 cggctcgtcg accgcatcgc caaggcctga cgatggcgat ggtccgcacg cccctgatgt
     1621 tcgcccgcct gccggcgggc agccggcgcg cgctgtttgc gctggcgctc ggcggcatct
     1681 gcttcgcctt cgcctttccc gtgctgtggc tgatcctgac ctcgctcagg cccgaatcgg
     1741 gcgtctatta cgtccatcgc ggcaccgagt tcaccctggc gagtttcgcc gaggtgctgc
     1801 gcgacgagcg gctggtccag gcgttcgtca attcggcgct gattgccacc ttggccaccg
     1861 tcttctcgct gctggtgacg gtgtcgagcg gctatatgct gtcgcgcttc cgcgggcccg
     1921 ccgccagcac ctggttcggc accatctatg tgttccgctg cgtgccctac atctcctggg
     1981 tgctgccgct ctacttcgtg acccagagct ggggcatcta cgacacctat atcggcctgc
     2041 tgctgccgca catcgcggtg cacatctgct tcttctcgtg gctgatgaag ggctttttcg
     2101 acggcatcga tccctctatg gagcatgccg cgctgatcga cggctgcacg cgctggggcg
     2161 ccttcctgcg ggtggcgctg ccctcggcga tcccggcgat cgccgccctc gccgtgctgt
     2221 gctggctgtt cacctggaac gagttcctgt tcgccctgat cctgaccggc aaccgcgtgc
     2281 cggtgatcac cgtggtgatg gcccagttcg tcaccgagat ggggctgcgc tggaacctga
     2341 tggccgccac ggcggtcatg gcgctggtgc cggctttcct gctggcgctg ttcggccaga
     2401 aatacgtgat ccgtggcctc aggatttaga ggggctggat ctgaattcag aactagacgg
     2461 aggaaacgca atgtaccgaa tgggaagaag gacaatagcc gcggccgctg ccgccgccgg
     2521 actgctcgcc gcaagcggcg cctacgctca ggcggtcaag gaactgcgga tcggctacca
     2581 gccgagcccg ctgcaggacg cctcggttgc catgttcgag acctggggag ccaagaacgg
     2641 cgtcaagatc gtcaaggtgc cgaactccta cggcgtctat gtcgagaaga tgaccgcctc
     2701 gctcacctcg aactccgacc agtacgacgt gatctggcac aacgacgatt ggggtcagct
     2761 atgggcccac ctgctcgagc cgaccgacga tattcccgga ctgcaattcg ccgagaagtg
     2821 gggcatggac aaggtcgtgt tcggcaatgc ccagggccag aacaccgtgg tgccgatggg
     2881 ccagacgttc agcgtgttct tctaccgcac cgacctgctg cagcccaacg aggtgcccaa
     2941 gacccaggcc gaagtggtgg aggtgagcaa gaagctgcag gccgccaaca aggtgaagtg
     3001 gggctatgtc ggcggcatgt cgatgaacca cacctggttc acctggttct ggtcgatgtg
     3061 gggcaacaac tgcgacgtgc tgatgccgtt ctacgagcgc gacaacaagg tgctggcgca
     3121 gaacggctgg aagtcgagcc tgaacgaacc ctgcatgaag cagacggtcg agtactggtg
     3181 ggatgccatc aacacccaca agatctcgcc gcgcggcatg ccggcttatg atcgcaccga
     3241 ggccaacgcc atcttcacgt cgggggacgc cgccttcacg gtggccgatt cgctgtggtg
     3301 gggttccttc aacgatccgg ccaagtcgaa ggtcgcgggc aagatcgcgg cggcacgttt
     3361 cccgctcggg ccgaaccgca ccaagaactt cgcctgggac gacatctggg gctgggcgat
     3421 cccgaagtcg atctcgcccg agcgcaagaa gctcgccaag gagatgctgg ccgccatgat
     3481 ggtcgacgag gaaggccaga tgaagctgtg gaaggcgacc ggtgcgccgc cgcccaacac
     3541 ccagttctgg cccaagatcg ccgcccagga tcccttcatg aagctcctga aggaagccgc
     3601 gctcgattcc cccgacaagg tgcgcggcgc ctactacttc gcgcagtggc cggccgtgca
     3661 caaggcgttc aacgacgccg tgaccaaggc cgtcaccggc aagcgcgagg acatcgccaa
     3721 ggtgctgtcc gagaatgccc cgctggtcag caaggcagcg cagcagtagc ggcgctcgct
     3781 agcctctcct ctcatattcc tctccccctt gggggagagg ttaggtgagg gggaagcgac
     3841 gggcgtaacc ccctcaccca gcctctcccc caagggggag aggaggaaga gcaagaaaga
     3901 gtacgagaag aaagactacg acgagcaaag agtaagcgag tccatggcag ccatcgttct
     3961 catcaagctc aacaagcact acggttcgct ccaccacgcg gtgaaggacg tcgatctatc
     4021 catcgccgac cgcgagttcg tggccctggt cggcccgtcg ggctgcggca agtcgacgac
     4081 cttgcgcatg atcgccgggc tggaggacat ctcgagcggc gagatcagga tcggcgagcg
     4141 ggtggtcaac cacctgccgc cgcgcgaccg cgacgtcgcc atggtgttcc agaactacgc
     4201 gctctaccag cacatgagcg tctacgacaa tctcgccttc gggctgcgca acaagaagat
     4261 gcccgaacgc gacatcaagg cggcgatcga ccgcgccgcc gagatgctgg gcctgcatga
     4321 cttgctgaag cgccgcccgc gccagctctc gggcggccag cagcagaggg tggcgctcgg
     4381 ccgctgcatc gtgcgcaacc cgctggtctt cctgttcgac gagccgctca gcaatctcga
     4441 cgccaagctg cgcgcccaga tgcgcatcga gatcaagcgg ctgcatgccc agctgccgac
     4501 gacctcggtg ttcgtgaccc acgaccaggt cgaagccatg accctgggcg accgcgtggt
     4561 cgtgatgcgc gacgggcggg tccagcaggc cggcacgccg ctggtggtct acaacaatcc
     4621 ggtc
//
LOCUS       DASWGA010000991         2806 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2024847, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000991 DASWGA010000000
VERSION     DASWGA010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2024847"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..928)
                     /locus_tag="VF991_22700"
     CDS             complement(<1..928)
                     /locus_tag="VF991_22700"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9559320.1"
                     /translation="MDRDTRDMLLETADRFFTQRCGRDVVNGVEKGAWPADLWQEIED
                     MGLPLIAVPQDKGGAGGTLADMLALLRLAGAHAVPVPLGETALANLLIAAAGGEPKPG
                     PATLALGNLSLNGGRLGGKVERVPFAAVAERVVAVVGNTLAVVAKANAKVEAKPSHAG
                     EPYGTVTFDNAVAEFSAASPASAERAFELGAVMRAMQMAGAADKVLAIAVEYSKQRVQ
                     FGRSISTFQAIQHMLAELASCVAATIASAEAAARDADEGGLLDGGRFSIAAAKSQASE
                     FAQRIAAISHQSMGAMGFTHEHILHHYTRRLWV"
     gene            complement(944..2101)
                     /locus_tag="VF991_22705"
     CDS             complement(944..2101)
                     /locus_tag="VF991_22705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002710946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9559321.1"
                     /translation="MSIPKLEFPPFHLPPEAEALRVEVRAFLKQTLPRLKTEDRFASW
                     NTRSPEFSKAMGKKGWIGITWPKQYGGSERSFLDRYVITEELLGNGAPAGAHWVADRQ
                     SGPLLLRFGSEEQRQAILPRITAGECYFSIGMSEPDSGSDLASVRTRAEPVQGGFRVN
                     GTKVWTSGAHRNHYCITLVRTSGQHGDRHKGLSQLLVDLKTPGITIRPIINLAGRHDW
                     NEVTFTDTFIPESCLIGNEGDGWLQVTSELAFERSGPERFMQNFYILRELVRVLGRQP
                     AKRASAILGRLVARLWTLRQMSVAVAGMMQGGKSPAIEAALVKDLGTIYQQDLPEIAR
                     AIAESDATTEQDMADFLDVAQYATMMAPSYTIQGGTTQVLRGIVARGLGLR"
     gene            2178..2648
                     /locus_tag="VF991_22710"
     CDS             2178..2648
                     /locus_tag="VF991_22710"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9559322.1"
                     /translation="MPRRPTRPPPLLAEFDDEEREAVLAANRAFYRAFAEHDPQAMDR
                     IWAPTGALVCLHPGQAPLHERIEIMASWRAILRHPEAPKVRCLGEWVMGRPGLAIVVC
                     REILPEGQLMATNTFVRLSEGWRMVGHHSGPVPPVETGQTTVASAPMRDRRKLH"
BASE COUNT          412 a          954 c          995 g          445 t
ORIGIN      
        1 acacccagag ccggcgcgtg tagtggtgca ggatgtgctc gtgggtgaaa cccatggcgc
       61 ccatcgactg gtgcgagatg gcggcgatgc gctgggcgaa ctcggaggcc tggctcttgg
      121 cggcggcgat cgagaagcgt ccgccgtcca acaggccgcc ctcgtcggcg tcgcgcgccg
      181 ccgcctcggc cgaggcgatg gtggcggcga cgcagctcgc gagctcggcc agcatgtgct
      241 ggatcgcctg gaaggtcgag atcgagcggc cgaactgcac gcgctgcttg gaatattcga
      301 cggcgatcgc cagcaccttg tcggccgcgc ccgccatctg catggcccgc atgacggcgc
      361 ccagctcgaa cgcccgctcg gcgctcgccg gcgaggcggc gctgaactcg gccacggcat
      421 tgtcgaacgt caccgtgccg tagggttcgc cggcgtggct cggcttggcc tcgaccttgg
      481 cgttggcctt ggcgaccacg gccagcgtat tgccgacgac ggcaacgacg cgctcggcga
      541 ccgcggcgaa gggcacgcgc tcgaccttgc cacccagccg tccgccgttc agggaaagat
      601 tgccgagcgc cagcgtcgcc gggccgggct tgggctcgcc gccagccgcc gcgatcaaca
      661 ggttggccaa cgcggtctcg ccgagcggca ccggcacggc gtgcgcaccg gcgagcctga
      721 gcagcgccag catgtcggcc agggtgccgc ccgcgccgcc tttgtcctgg ggcacagcga
      781 tcagcggcag gcccatgtcc tcgatctcct gccagagatc ggccggccag gcgcccttct
      841 cgacgccgtt cacgacgtcg cggccgcagc gctgggtgaa aaagcggtcg gcggtctcca
      901 gcagcatgtc gcgggtgtct cggtccatcg ctcttctccc tgctcagcgc agaccgaggc
      961 cgcgcgcgac gatgccgcgc agcacctggg tcgtgccgcc ctggatggtg taggagggcg
     1021 ccatcatggt ggcgtactgg gcgacgtcga ggaaatcggc catgtcctgc tcggtcgtgg
     1081 cgtccgattc ggcgatcgcg cgggcgatct ccggcaggtc ctgctggtag atcgtgccga
     1141 gatccttcac gagcgccgcc tcgatggcgg gcgacttgcc gccctgcatc atgccggcga
     1201 cggcgaccga catctggcgc agcgtccaca ggcgcgcgac caggcggccg aggatcgcgc
     1261 tggcgcgctt ggccggctgg cggccgagca cgcgcaccag ctcacgcagg atgtagaaat
     1321 tctgcatgaa gcgctcggga cccgagcgtt cgaaggcgag ctcgctggtg acctgcagcc
     1381 agccgtcgcc ctcgttgccg atcaggcagc tctcgggaat gaaggtgtcg gtgaaggtca
     1441 cctcgttcca gtcgtggcgg ccggcgaggt tgatgatggg acggatggtg atgcccggcg
     1501 tcttgaggtc gaccaggagc tggctcagcc ccttgtggcg atcgccatgc tggcccgaag
     1561 tgcggaccag ggtgatgcaa tagtggttgc gatgggcgcc cgaggtccag accttggtgc
     1621 cgttgacccg aaagccgcct tgcaccggct cggcccgggt ccggaccgag gcgaggtcgg
     1681 agcccgagtc gggctcgctc atgccgatcg agaaatagca ttcgccggcg gtgatgcgcg
     1741 gcaggatcgc ctggcgctgc tcctcgctgc cgaagcgcag cagcaacggt cccgactggc
     1801 ggtcggccac ccagtgggcg ccggccggcg cgccgttgcc cagaagctcc tcggtgatga
     1861 cgtagcggtc gaggaaactg cgttcgctgc cgccgtattg cttgggccag gtgatgccga
     1921 tccagccctt cttgcccatc gccttgctga actcgggcga gcgcgtgttc cagctcgcaa
     1981 agcggtcctc ggtcttgagc cgcggcagcg tctgcttgag gaaggcgcgg acttccacgc
     2041 gcagcgcctc ggcctcaggc ggcagatgga acggcggaaa ttcgagcttg gggatcgaca
     2101 tcgtcatctc ggcggttgga tgtcccttct ctgtcggcta atcctaggcc gcgcaacccg
     2161 ggagtttcga gagacgaatg ccgcgccgtc cgacccgccc gccgccgctc ctggcggaat
     2221 tcgacgacga ggagcgcgag gccgtgctcg ccgccaaccg cgccttctat cgcgccttcg
     2281 ccgagcacga cccccaggcg atggaccgga tctgggcgcc gaccggcgcc ctggtgtgcc
     2341 tgcatcccgg ccaggcgccg ttgcacgagc gcatcgagat catggcgagc tggcgcgcca
     2401 tcctgcgcca tcccgaggcg cccaaggtgc gctgcctggg cgaatgggtg atgggccgcc
     2461 ccgggctggc catcgtggtc tgccgcgaga tcctgcccga gggccagctc atggcgacca
     2521 acaccttcgt ccgcctgagc gaaggctggc gcatggtcgg ccatcattcc ggcccggtgc
     2581 cgccggtcga gaccggacag acgactgtgg catcggcgcc gatgcgcgac cggcgcaagc
     2641 tgcactaggg catggactca ctagcacgca gcagcgatca gcttactcga tcgtctcatc
     2701 ggcgcgggcg aggatcgagg gtggcatcgt gaggcccagc gcctcggccg cgtgcagatt
     2761 caccatcagc tcgaaattgg tcggccgctc gatcggcagg tttgcc
//
LOCUS       DASWGA010000992         3962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1375008, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000992 DASWGA010000000
VERSION     DASWGA010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3962
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1375008"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..819)
                     /locus_tag="VF991_22715"
     CDS             complement(<1..819)
                     /locus_tag="VF991_22715"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX9559323.1"
                     /translation="MSRQPGLFEPAEKPPRARAPAAEVRPAWDSPLLQAPVLPTDIRL
                     GTSSWFFPGWRGLVYDGVHPQVTLSRKGLAAYAEIPLLRTVSLDRTFYAPLSAVEYLR
                     YAHQVPDHFSFVVKAPALVCDALMRDEQGRGKVANPHFLDAAIAAREFVVPCLEGLGA
                     KAGPLVFQVSPLPRALVEEAAILVERLAAFFAALPRELGKHRPLYALELRNSELLTPR
                     LMKMLGGADVRYCIGLHDRMPEVERQEAALKALDTDAPGPLVVRWNLHRGFLYQA"
     gene            complement(816..>3962)
                     /gene="dnaE"
                     /locus_tag="VF991_22720"
     CDS             complement(816..>3962)
                     /gene="dnaE"
                     /locus_tag="VF991_22720"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004226.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX9559324.1"
                     /translation="GYLNLMRLVSRAHLEFKSGSLAALPLSELLGNTDGLLALVGSTG
                     SVVGRLLLAGQVPAAAHQLERLEGLFDGRLYIELQRHGEEAERRIEGPLLELAYGRGL
                     PLVATNDVHFPKASMYEAHDVLLCIEQGAHIEDPNRRRLTPEHYFKSAAEMRALFADL
                     PEACDNTLAIARRCAYMPVPRKPILPRYTKLGGRAEKDALKEMAESGLAALKKGDRLS
                     PDIDFKKYHDRLAYELDMIETMGFSGYFLIVADFIQWAKDNGIPVGPGRGSGAGSLVA
                     WALKITDLDPLRWGLLFERFLNPERVSMPDFDIDFCQDKRDRVIRYVRDEYGHDRVAA
                     IITFGKLQARAVLRDVGRVLGMPYGQVDRICKLVPNNPAKPVTLAQALESEQLLKEQY
                     AADEEIKRLIDLALQLEGLYRNASTHAAGVVIGDRPLDQLVPLYRDTDNKESLPATQF
                     NMKWVETAGLVKFDFLGLKTLTVIEKACEQIGRAKIDIAKIPLDDEPTFRMLAKGDAY
                     GVFQMEGSGMRDILAKLKPNRFEDLIALVALYRPGPMDDIPTYISVKNGQERADYLHP
                     SLKGILEETYGIMVYQEQVMEIAQVLSGYSLGGADLLRRAMGKKIQSEMDAQRATFIE
                     GARKNDVEEARASMIFDKVAKFAGYGFNKCHSAPYALVAYQTAYLKANYPVEFFAASM
                     TLDMGNADKIGNFRRELERLKIPLLAPDINRSMAEFAVEALPDGQKGVRYALAAIKGV
                     GRDAMARLAEERERGGPFKDLFDVAERLDQRVINKRLLESLVKAGAFDSLNKNRAQTF
                     GAVETLSRHSQATHEARGSNQNSLFGDDTAQRRSALPKVPDWAPMGKLQNEFAAIGFY
                     LSSHPLAAYERSLQRLGVSRAADLAVLLARGAPGRIKLAGTIIDRQERTSAKGNRFAF
                     VQCSDQSGAFELTVFSELLGSKRNLLEPGQAVLVTADGRLDGEQVKLTAQSIEKLEDA
                     VANAAAGLRIVLSDLAALEALRKTLEGKRGRGRVTLVVPMPDDAEAEVTLPGTYSIAG
                     GLRDAIGGLPGIAQVEEI"
BASE COUNT          630 a         1302 c         1341 g          689 t
ORIGIN      
        1 agcctgatag aggaagccgc ggtgcaggtt ccagcgcacc acgagcggcc cgggcgcgtc
       61 cgtatcgagc gctttgagcg ccgcctcctg gcgctcgacc tccggcatgc ggtcgtgcag
      121 gcctatgcag taacgtacgt ctgcgccgcc cagcatcttc attaggcgcg gcgtcagcag
      181 ctctgaattg cgcagctcca gggcatagag cggccgatgc ttgccgagct cgcgcggcag
      241 ggcggcgaag aaggcggcca ggcgttcgac gaggatggct gcctcctcga ccagggcacg
      301 cggcagcggc gagacctgga agaccagcgg ccccgccttg gcgcccaagc cttcgaggca
      361 gggcacgacg aattcgcggg cggcaatggc ggcatcgagg aaatgcggat tggccacctt
      421 ccccctgccc tgctcgtcgc gcatgagggc atcgcacacc agggccggcg ccttgacgac
      481 gaagctgaaa tgatcgggca cctggtgggc gtagcgcagg tattcgacgg cggagagcgg
      541 ggcgtagaac gtgcggtcga ggctgacggt gcgcagcagc gggatttcgg cataggccgc
      601 caagcctttg cggctgagcg tgacctgggg atggacgccg tcataaacca ggccgcgcca
      661 gccgggaaag aaccacgacg atgtgccgag ccggatgtcg gtcggcagca ccggcgcctg
      721 caggagcggt gaatcccagg ccggcctcac ctctgccgcc ggcgcgcgcg cccttggcgg
      781 tttttctgcc ggttcgaaca ggccgggctg gcggctcaaa tctcctccac ctgtgcgatg
      841 cccggcaggc cgccgatggc gtcgcgcagg ccgcccgcga tcgaataggt gccgggcaag
      901 gtgacctcgg cttcggcgtc atccggcatc ggcacgacca gggtgacccg gccgcggccg
      961 cgcttgcctt ccagggtctt gcgcagcgcc tctagcgcgg cgagatcgga cagcacgatg
     1021 cgcaggccgg ccgccgcatt ggccaccgcg tcttcgagct tctcgatcga ctgcgcggtg
     1081 agcttgacct gctcgccgtc gagccggccg tcggccgtaa ccagcaccgc ctgccccggt
     1141 tccagcagat tacgcttgct gcccaaaagc tcgctgaaca cggtgagctc gaaagccccc
     1201 gactgatcgg aacactgcac gaaggcgaag cggttgccct tggccgaggt gcgttcctgg
     1261 cggtcgatga tggtgccggc gagcttgatg cggcccggcg caccgcgcgc cagcagcacg
     1321 gccaagtcgg ctgcccggct cacgcccaga cgctgcaggc tgcgctcgta ggccgccagc
     1381 ggatgcgagg agagataaaa accgatggcg gcgaactcgt tctgcagctt ccccatcggc
     1441 gcccagtccg gcaccttggg cagcgccgac cgccgttgcg cggtatcgtc accgaatagg
     1501 ctgttctgat tgctgccgcg cgcctcgtgc gtggcctggg agtggcgcga caaggtctcg
     1561 acggcgccga aggtctgggc ccggttcttg ttgagcgaat cgaaggcgcc ggccttcacc
     1621 aggctttcga gcaggcgctt gttgatcacc cgctggtcga gccgctcagc aacgtcgaac
     1681 aggtccttga acgggccgcc gcgctcgcgc tcttcggcca gccgggccat cgcgtcgcgg
     1741 ccgacgccct tgatcgccgc caacgcgtag cgcacgccct tctggccatc cggcagggct
     1801 tcaacggcga actcggccat cgacctgttg atgtcgggcg ccagcagcgg gattttcagg
     1861 cgctccagct cgcggcggaa attgccgatc ttgtcggcat tgcccatgtc cagcgtcatc
     1921 gacgcggcga agaattcgac cggatagttc gccttcaggt aagccgtctg gtaggcgacc
     1981 agcgcgtacg gcgcggagtg gcatttgttg aagccgtagc ctgcgaattt cgccaccttg
     2041 tcgaagatca tcgaggcgcg cgcctcctcg acgtcgttct tgcgcgcgcc ctcgatgaag
     2101 gtcgcgcgct gggcgtccat ctcggactgg atcttcttgc ccatggcgcg gcgcaaaagg
     2161 tcggcgccgc ccagcgaata gcccgacagg acctgggcga tctccatcac ctgttcctgg
     2221 tagaccatga tgccgtaggt ctcttcgagg atgcccttca gcgacggatg caggtagtcg
     2281 gctctttcct ggccattctt gacgctgata taggtcggga tgtcgtccat cgggccgggc
     2341 cgatagagcg ccaccagggc gatcaggtcc tcgaagcggt tgggtttcag cttggccagg
     2401 atgtcgcgca tgccgctgcc ttccatctgg aagaccccgt aggcatcgcc cttggccagc
     2461 atcctgaagg tcggctcgtc gtcgagcggg atcttggcaa tgtctatttt ggctcggccg
     2521 atctgctcgc aggccttttc gatcacggtc agcgtcttca gcccgaggaa gtcgaacttc
     2581 accagacccg ccgtctcgac ccatttcatg ttgaactggg tggccggcag cgattccttg
     2641 ttgtcggtat cgcgatagag cggcacgagc tggtcgagcg ggcggtcgcc gatcaccacg
     2701 ccggcggcgt gcgtcgaggc gttgcggtac agcccctcga gctgcagcgc gagatcgatc
     2761 aggcgcttga tttcctcgtc ggcggcatat tgctccttca ggagctgctc gctctccagc
     2821 gcttgtgcga gggtcaccgg cttcgccggg ttgttcggca ccagcttgca gatgcggtcg
     2881 acctggccat acggcatgcc cagcacgcgg ccgacgtcgc gcaatacggc gcgcgcctgc
     2941 agcttgccga aggtgatgat cgcggcgacg cggtcgtggc cgtactcgtc gcgcacatag
     3001 cggatcaccc ggtcgcgctt gtcctggcag aagtcgatgt cgaagtcggg catcgacacg
     3061 cgctcggggt tgaggaagcg ctcgaacagc aggccccagc gcaacgggtc gaggtcggtg
     3121 atcttgagcg cccaggcgac cagcgaaccc gcgcccgagc cgcgtccggg cccgaccggg
     3181 atgccgttgt ccttggccca ctggatgaag tcggcgacga tcaggaagta gcccgaaaat
     3241 cccatcgtct cgatcatgtc gagctcgtag gcgagacggt cgtggtattt cttgaagtcg
     3301 atgtcgggcg acagccggtc gccttttttc agggcggcaa ggccgctctc ggccatttcc
     3361 ttcagcgcgt ccttctcggc gcggccgcca agcttggtgt agcgcggcag gatcggcttg
     3421 cgcggcaccg gcatgtaggc gcagcgccgg gcgatcgcca gggtgttgtc gcacgcttcc
     3481 ggcaggtcgg cgaacagcgc gcgcatctcg gccgccgatt tgaaatagtg ctccggcgtc
     3541 agcctgcggc ggttgggatc ctcgatatgg gcgccctgct cgatgcacag cagcacgtca
     3601 tgcgcctcgt acatcgaggc cttggggaaa tgcacgtcgt tggtcgcgac cagcggcagg
     3661 ccgcgcccat aggcaagctc gagcagcggc ccctcgatac gccgctcggc ctcctcgcca
     3721 tggcgctgca gctcgatata gagcctgccg tcgaacaggc cctctaggcg ttcgagctgg
     3781 tgggccgcgg ccgggacctg gcccgccagc aaaagccggc caacgacgct gccggtgctg
     3841 ccgaccaggg cgagcaggcc gtcggtattg cccaaaagct cggacagcgg cagcgccgcc
     3901 agcgatccgc tcttgaattc gaggtgggcg cggctcacca gccgcatcag gttgaggtag
     3961 cc
//
LOCUS       DASWGA010000993         5358 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2520976, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000993 DASWGA010000000
VERSION     DASWGA010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5358
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2520976"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="VF991_22725"
     CDS             complement(<1..261)
                     /locus_tag="VF991_22725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559325.1"
                     /translation="MTARLRVLSPLAALALAGCGGSGPVDAGPPTDVRLDQANQAGTQ
                     ALTMDMPSVAVRQYEVALSRAYERDDVGAIADVSYNLALAQMK"
     gene            complement(258..1253)
                     /locus_tag="VF991_22730"
     CDS             complement(258..1253)
                     /locus_tag="VF991_22730"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX9559326.1"
                     /translation="MKRSIFGVYQLDEIVGAVVLACIGVFIAVLINAGLLKDWFQPSF
                     TLRILLPDEGVSGLAPGAEVQVLGTRAGEVRRIVIDPNQRMHAVARVEDQMRPFIRRD
                     SVVSIRRQFGVAGAAFIDISRGSGPELDWSYAVIAATSERATTDTIGQMVDELRAKIM
                     PLIDDVQKAVLAFTVVAQRAVDPAGPLEQTLASAAGIARRVETGEGVAGRLIANDKMA
                     ADLEQTLVNVREFAAQLERTSKDPRIAQILQKTDAVLTSLQATTRNLAATTPQITRNM
                     AETTDALPATLLQAQIAARELELLLGQLRHHWLLGGSSAPSAPASRRAPAVEVRP"
     gene            complement(1250..1954)
                     /locus_tag="VF991_22735"
     CDS             complement(1250..1954)
                     /locus_tag="VF991_22735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559327.1"
                     /translation="MALRPSRPVLSLQGVALVERQFSATPARLDFELLRSELAMVQVD
                     DEADAAALVDLCVGLVDPGAGQVRFLGVDWTTRTPRERLHRRRRIGAVVQTDVWPAHM
                     TVLDSVLVASAYHFDRPPTEVIADATALARLFGLPGLPTGRRETTPRRALVRAACVRG
                     FLGSPDLIVVQDQTLDQASDLAVPLAQAISAARDRGGAVLWITASLVAQAAQFVQAEH
                     LFRLGEHGLVRMRRSR"
     gene            complement(1955..2782)
                     /locus_tag="VF991_22740"
     CDS             complement(1955..2782)
                     /locus_tag="VF991_22740"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9559328.1"
                     /translation="MIAGAQRRSVAVRWPRRAMATLGTATISTTRRLLLYLALAATVL
                     IVAMRRGAWRGPVWIEFKRVLHEVAVRSLPTTVATGVLVGFALVSQAVYWLAQTGTTG
                     LVGQVIVILLIREFVPILVGLIVFGRSGTATLIELGEAQTKGWLRLLEIQGLDPLALL
                     VLPRAFGFALGAFCLATVLLLATLSTGYLVAHGLGLVAYSIWDFSDLVLRAMKVEDFI
                     FPPLKCITIGFAVALACCATGLGRRDETDELQRLVPRGFVRSALAILVVNSVFDLVV"
     gene            complement(2779..5178)
                     /locus_tag="VF991_22745"
     CDS             complement(2779..5178)
                     /locus_tag="VF991_22745"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEX9559329.1"
                     /translation="MARPPASASRIVAPVLTTFSGAVRRDRRRSGPGAWLRHSLPVLG
                     VVLVVMLVSAIAYFVYDSNRRGAAILGNDLITAIDRRVAVQMHSYLSPAQQFLELADA
                     AAAGRGVFGGGRAAQQFAMHALGTITSVTAFSYADPEGNFLFVLRNDKGGFDSKTVDR
                     RDGGRIVTWTRRDAQGNVTAIEDDPSDTFDPRTRPWYQGAESTKKPFWTDTYLFFTLK
                     KPGITFSIPHFDAEGKLTSVMGVDIELATLCAFLKKLDIGLSGRALIIDRNGRVVAYP
                     SDNWLPADRSDAKAPMLDDLGDPILARAYSRLRVEGYGRQVLDFGDKRIIVSSEPVSM
                     MTDRNWVVLIVVPETDFLGFVSDSAVAALVMSVLVVLIVAGLSGLLAWRNVMAERRAN
                     AAAARQQSIETRTRTFVELARASGPADGAQDEGLETALEAVAADSAAKRVAVWRLNPD
                     RTTLLCEDCFDQISHDHTSGMELHRDQVPDLFASLGSGTPIDAVDASQERQTADLFDT
                     YLKPLHISSVYIVPIIANGRLMGMLTVEDPQRGDHTAAMVGFCDALSVVLALRYAAAA
                     PPIPVAARAAVAAASASAGGAAPFESFAERQSQLERTLMQHNISLEELDESAIDRAAI
                     AVLQLPAWTTVSQRPAGCEERTAMDAIIDELRRTIEKSGVSYAALLDDQIVLAAFSPD
                     KAAVAGNAHCVATAVLDLRDRLFELEEKWNISLDFRLAIDVGTIMSSAVATDPPSRNV
                     WGGAVGIAKVLAATAARRTIAASETTYDLLSDRFLFRSRGSYFLPETGNMRTFVLVGR
                     I"
BASE COUNT          885 a         1773 c         1919 g          781 t
ORIGIN      
        1 cttcatctgg gcaagcgcca aattgtagga aacgtcggcg atggcgccga catcgtcgcg
       61 ctcataggcg cgcgacagcg ccacctcgta ttggcgcacc gcaacgctcg gcatgtccat
      121 cgtcagggct tgcgtgccgg cctgattggc ctggtcgagc ctgacatcgg tgggcgggcc
      181 ggcgtcgacc gggccgctgc cgccacagcc tgccagcgcc agcgcggcga gcggcgacag
      241 gacgcgaagc cgtgccgtca cggccgcacc tcgaccgccg gcgcgcggcg gctcgcgggc
      301 gcagacggcg cgctggagcc gcccaacagc cagtgatggc ggagctggcc cagcagcagc
      361 tcgagctcgc gcgcggcgat ctgggcctgc agcagcgtgg ccggcagggc gtcggtggtt
      421 tcagccatgt tgcgcgtgat ctgcggcgtc gtggcggcga ggttgcgcgt cgtcgcctgc
      481 agcgaggtca ggacagcgtc ggtcttctgc aggatctggg cgatgcgtgg atccttcgag
      541 gtccgttcga gctgggcggc aaactcgcgg acgttgacca gcgtctgctc gaggtcggcc
      601 gccatcttgt cgttggcgat caggcggccg gccacgccct cgccggtctc gacgcgccgg
      661 gcgatgccgg cggccgaggc cagcgtctgt tcgagcggtc ccgccggatc gacggcgcgc
      721 tgggcgacga cggtgaaggc cagcaccgcc ttctgcacgt cgtcgatcag cggcatgatc
      781 ttggcgcgca gctcgtccac catctggccg atcgtgtcgg tcgtcgcccg ctcgctggtg
      841 gcggcgatga ccgcgtagga ccagtcgagc tccgggccgc tgccgcgcga aatgtcgatg
      901 aaggccgcac ccgccacgcc gaactggcgg cggatcgaga ccaccgagtc gcggcggatg
      961 aagggccgca tctggtcctc gacccgggcg acggcatgca tgcgctggtt gggatcgatg
     1021 acgatgcggc gcacttcgcc ggcgcgggtg cccagcactt ggacctcggc gccgggcgcc
     1081 aggcccgaga cgccctcgtc gggcagcagg atgcgcaagg tgaaggacgg ttggaaccag
     1141 tctttcagca ggccggcatt gatcagcacg gcgatgaaca cgccgatgca ggccagcacc
     1201 acggcgccga cgatctcgtc gagctggtag acgccgaaga tggagcgctt catcgcgacc
     1261 tccgcatccg caccaggcca tgctcgccca gccggaacag gtgctccgcc tggacgaatt
     1321 gcgcagcctg cgccaccagg ctggcggtga tccacagcac cgcaccgccg cggtcgcgcg
     1381 ccgccgagat cgcctgcgcc aggggcacgg cgaggtcgga cgcctggtcg agcgtctgat
     1441 cctgtaccac gatcaggtcg ggcgagccga ggaatccgcg cacgcaggcg gcgcggacca
     1501 gggcgcgccg gggggtcgtt tcgcgccgtc cggtcggcag gccgggcagg ccgaacaggc
     1561 gggcgagtgc cgtggcgtcg gcgatcacct cggtgggcgg ccggtcgaag tgataggcgc
     1621 tcgccaccag gaccgaatcg agcacggtca tgtgcgccgg ccagacgtcg gtctgcacga
     1681 ccgcgccgat acggcggcgg cggtgcagcc gctcgcgcgg cgtgcgcgtc gtccagtcga
     1741 cgccgaggaa gcgcacctgc cccgcgccag ggtcgaccaa tccgacgcaa agatcgacca
     1801 gtgccgcggc gtcggcctcg tcgtcaacct gcaccattgc cagctcgctg cgcagcagtt
     1861 cgaaatcgag tcgcgccggc gtggccgaga actgacgttc gaccagggcg acaccctgca
     1921 gcgaaaggac cggacggcta ggcctgagcg ccatctagac caccaagtcg aacacgctgt
     1981 tgaccacgag gatggcgagc gccgagcgca cgaagccgcg cggcaccagc cgctgcagct
     2041 cgtcggtctc gtcgcgccgc cccagccccg tggcgcagca ggcgagcgcc accgcgaagc
     2101 cgatggtgat gcatttgagc ggcgggaaga tgaagtcctc caccttcatg gcgcgcagca
     2161 ccagatcgga gaaatcccag atcgaatagg cgaccagtcc cagcccatgc gccacgaggt
     2221 agcccgtcga cagggtggcg agcagcagca cagtggcgag gcagaaggcg cccagcgcga
     2281 atccgaaggc gcgcggcagc accaatagcg cgagggggtc gaggccctgg atctcgagca
     2341 gacgcagcca acccttggtc tgcgcttcgc ccagttcgat cagggtggcg gtaccgctgc
     2401 ggccgaacac gatcaggccg accaggatcg gtacgaactc gcgaatcagg aggatcacga
     2461 tgacctggcc gaccaggccg gtcgttccgg tctgcgccag ccagtagacg gcctgcgaca
     2521 ccaaagcgaa gcccaccagc acgccggtgg cgacggtggt cggcagcgaa cgcaccgcga
     2581 cctcgtgcag cacgcgcttg aactcgatcc agaccggccc gcgccaggcg ccgcgccgca
     2641 tcgccacgat cagaacggtg gcggcgagcg ccaaatagag cagcaaccgg cgcgtggtgg
     2701 aaatggtggc ggtgcccagc gtggccatgg cgcggcgcgg ccagcgcacg gccacgctgc
     2761 ggcgttgggc gccggcgatc atatgcggcc gaccagcacg aaagtgcgca tgttgccggt
     2821 ctcgggcagg aaatagctgc cacgcgatcg gaacaggaac ctgtccgaga gaagatcgta
     2881 agtcgtctcc gacgccgcga tggtgcgccg tgccgcggtg gcggccagga ccttggcgat
     2941 gccgactgcg ccgccccaca cgttacggct gggtggatcg gtggcgacgg ccgagctcat
     3001 gatggtgccg acatcgatgg ccagccggaa gtcgaggctg atgttccatt tctcctcgag
     3061 ctcgaacagg cgatcacgca ggtcgagtac cgccgtcgcc acgcaatgcg cgttgcccgc
     3121 aaccgcagcc ttgtccggcg agaaggctgc caggacgatc tggtcgtcga gcagggccgc
     3181 gtagctgacg ccgcttttct cgatcgtgcg gcgtagctcg tcgatgatcg cgtccatcgc
     3241 cgtgcgctcc tcgcaaccgg cgggccgctg cgacaccgtg gtccaggccg gcaactggag
     3301 aacggcgatg gctgcccgat cgatcgcgct ctcgtcgagt tcctcgagcg agatgttgtg
     3361 ctgcatcaac gtgcgctcca gctgcgactg gcgctcggca aaactttcga acggcgcggc
     3421 tccgcccgcg ctggcgcttg cggcggcgac ggcggcccgc gcggcgacgg gaatgggcgg
     3481 ggcggcggcg gcatagcgca gcgcgagcac caccgagagg gcgtcgcaga aacccaccat
     3541 cgcggccgtg tgatcgccgc gctgcggatc ctcgaccgtc agcatgccca tcagccggcc
     3601 gttcgcgatg atgggcacga tgtagacact gctgatgtgc agcggcttca ggtaggtgtc
     3661 gaacagatcc gccgtctgcc gttcctggct tgcgtcgacg gcgtcgatcg gcgttccact
     3721 gcccagcgag gcgaacaggt cggggacctg gtcgcggtgc agctccatgc cgctggtgtg
     3781 gtcgtgcgag atctggtcga agcagtcctc gcacaggagc gtggtgcggt cgggattgag
     3841 ccgccacacg gcaacccgct tggcggcgct atccgcggcg acggcttcca gcgccgtttc
     3901 cagaccttcg tcttgggcgc catcggctgg gccgctggcg cgcgccagct cgacgaaggt
     3961 gcgcgtgcgg gtctcgatcg actgctgccg tgctgcggct gcattggcgc gacgctcggc
     4021 catgacattg cgccaggcca gcaggccgct gaggccggcg acgatcagca cgacgagcac
     4081 cgacatcacc agggcggcga cggcgctgtc cgagacgaag cccaggaagt cggtctcggg
     4141 cacgacgatc agtaccaccc agttgcgatc ggtcatcatg ctcaccggct cggacgacac
     4201 gatgatgcgc ttgtcgccga aatcgagcac ctggcggccg tagccctcga cacgcagccg
     4261 gctgtaggct cgagccaaga ttggatcgcc gagatcgtca agcatcggcg ccttggcatc
     4321 ggaccggtcg gccggcagcc agttgtcgct cggataggcg acgacgcgac cgttgcgatc
     4381 gatgatgagc gcccgtccgc ttagcccgat gtcgagcttc ttcaggaagg cgcagagagt
     4441 cgccagctct atgtcgacgc ccatcacgct cgtaagcttg ccctcggcgt cgaagtgcgg
     4501 gatggagaaa gtgatgccgg gcttcttcag ggtgaagaag agataggtgt cggtccagaa
     4561 cggcttcttg gtggattccg cgccctggta ccagggccgc gtcctggggt cgaaggtatc
     4621 ggacggatcg tcctcgatcg cggttacgtt gccttgggca tcgcgcctgg tccaggtgac
     4681 gatgcgccca ccgtcgcgcc ggtcgacggt cttgctgtcg aagcctccct tgtcgttgcg
     4741 cagcacgaac aggaagttgc cctccgggtc ggcgtaactg aaggcggtga ccgacgtgat
     4801 ggtgccgagc gcgtgcatgg cgaactgctg agcggcacgg ccgccgccga agacgccgcg
     4861 tccggccgcg gcggcgtctg caagctcgag gaactgctgg gcgggggaca gataggagtg
     4921 catctgcacg gcgacgcgcc ggtcgatcgc cgtgatcagg tcgttgccga ggatggcggc
     4981 gccgcgacgg ttgctgtcgt agacgaagta ggcgatggcg ctgaccagca tcaccaccaa
     5041 caccacgccg agcaccggca ggctgtggcg cagccaagcc cccgggccgg accggcgccg
     5101 gtcgcgcctg acagctcccg aaaaggtcgt caggacgggc gcgacgatgc gcgacgcaga
     5161 agcgggcgga cgagccatgc ggtgatcatc ttaccgcatc agctcgccgt ggtagagcgg
     5221 cagctagtgg cggtttctgg gctcgcccgg ctggcgcggc aggaatgccg tcagcagccc
     5281 gagcagcagc aggaacggtg tgagcttgta gaccgtctcg atactggtgg cgtcggcgag
     5341 ctggccgagc gccgcggc
//
LOCUS       DASWGA010000994         4500 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_485514, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000994 DASWGA010000000
VERSION     DASWGA010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4500
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_485514"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /locus_tag="VF991_22750"
     CDS             <1..812
                     /locus_tag="VF991_22750"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9559330.1"
                     /translation="FVSGGSPVNIPYEYIVAPYNDVEGTRALLAKHGEELFAVLLEPM
                     QGSHGCLPGDVGFLRMVREETKARGITMIFDEVMTSRLAPGGLQEKTGVIPDMTTLGK
                     YIGGGMSFGAFGGRRDIMELFDPTKPDHLPHAGTFNNNALTMAAGAAGYGEVYTPAAA
                     KALNERGEKIRTRLNAICAREGVAFRFSGIGSMMTAHATARPIRTAADIASGNQDAKE
                     LFFFDMMAAGIWIARRGFVALNIMIGDSEGDRFVAAVEEFVTARKALLQPQ"
     gene            831..1817
                     /gene="speB"
                     /locus_tag="VF991_22755"
     CDS             831..1817
                     /gene="speB"
                     /locus_tag="VF991_22755"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEX9559331.1"
                     /translation="MNDASHPSKPAFPQPVSGTVVPRFGDVATFMRMPLFRDPADVEI
                     GMVGVPWDGGTTNRPGARHGPRQMRDLSTMMRRVHHVTGVAPYELAKCGDLGDAPVNP
                     ASLDDSLKRIETFFTKIHEAGAVPLSAGGDHLITLPIMRAIAKAGPLGMVHFDAHSDT
                     WDTYFGGYKYTHGTPFRRAVEEGLLDPKRVVQIGIRGSLYKRDDNLWAVEQGMRVITI
                     EEYFDLGVDKVIAEARRVVGDGPTYVSFDVDGLDPAFAPGTGTPEIGGYTPHEAQRML
                     RGLRGLDLVGGDVVEVSPPFDMSGNTALVGVTMMWEILCLLAESVARRKGRL"
     gene            complement(1964..2329)
                     /locus_tag="VF991_22760"
     CDS             complement(1964..2329)
                     /locus_tag="VF991_22760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009802170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX9559332.1"
                     /translation="MTEKTKVGIATHHELRERALQIARGERRRRPSEPKIWFTSLESL
                     AKVLSEPNRKLLRIIDERRPSSIAELEVLTGRRASNLSRTLKTMSQYGLVKLVPGKRG
                     SVAPKVLVREVQMDLSIVG"
     gene            complement(2322..2687)
                     /locus_tag="VF991_22765"
     CDS             complement(2322..2687)
                     /locus_tag="VF991_22765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003052370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6516 family protein"
                     /protein_id="HEX9559333.1"
                     /translation="MPGEDETLAYLLDLDGEEIIYDGGYVARFTVKRIAATPEKPHGV
                     SYSLTFHAADGRRLMGYDNAHRVPHRGGRFVSRHAAFDHWHRNETDEGQPYRFVSAEK
                     LIADFFDEIARILKEPNDD"
     gene            2857..3750
                     /locus_tag="VF991_22770"
     CDS             2857..3750
                     /locus_tag="VF991_22770"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9559334.1"
                     /translation="MASPRRRLSAILHADLAGFVRLTEGEEDLTFAHLKSARSDVWRP
                     AIETAGGSLVHSAGDAMLVEFSSALAAVTAAIDIQERMARFNEALDEDQQMLFRIGVH
                     LGEVIVDEESHDLFGDGVNLAARIQVMAEPGGVAVSRAVRDVTELQVDYAFIDGGEHR
                     AKNVSRPLHIFHVRAQVGVSTQTTTSVLPHTKLRFHGADMAGRRFGFDLQFERLMTKR
                     EGFVIGRDVDHCDAVLSHPTVSRRHARLVLADNVLQIEDLGSTNGTAIDGAAVGAGAQ
                     RPLAAGATLRIGDIELAFRYS"
     gene            3968..>4500
                     /locus_tag="VF991_22775"
     CDS             3968..>4500
                     /locus_tag="VF991_22775"
                     /inference="COORDINATES: protein motif:HMM:NF024547.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3987 domain-containing protein"
                     /protein_id="HEX9559335.1"
                     /translation="MPNDIHSVTSTATGGWPEIEPSLHEDGRPLVPSFPLDVLPQPWR
                     GWVADTAHSAGAPDDYVAQALLSAVAGLCGAGVRAQVTSAWSEPLVLWQALVGGPSSG
                     KTAALETIRQPLATVEKLLQRDAAAANTERHLRIVTGDAALSALTGALKDRPAGVLLW
                     RDDPSAWLAGLGRDAKT"
BASE COUNT          743 a         1534 c         1472 g          751 t
ORIGIN      
        1 atttcgtgag cggcggcagc ccggtcaaca ttccctacga atacatcgtg gcgccctaca
       61 acgacgtcga aggcacgcgc gcgctgctgg ccaagcacgg cgaggagctg ttcgccgtcc
      121 tgctcgagcc gatgcagggc agccacggct gcctgccggg cgacgtcggc ttcctcagga
      181 tggtgcgcga ggagaccaag gcccgcggca tcaccatgat cttcgacgag gtcatgacct
      241 cgcgcctggc gccgggcggg ttgcaggaga agaccggcgt catccccgac atgaccaccc
      301 tgggcaaata tatcggcggc ggcatgtcgt tcggcgcctt cggcggccgg cgcgacatca
      361 tggagctgtt cgacccgacc aagccggacc acctgccgca cgccggcacc ttcaacaaca
      421 acgccctcac catggcggcg ggcgcggcgg gctacggcga ggtctacaca ccggcggcgg
      481 ccaaggcgct gaacgagcgc ggcgagaaga tccgcaccag gctgaacgcg atctgcgccc
      541 gcgagggggt ggcgttccgg ttctccggca tcggctcgat gatgaccgcg cacgccacgg
      601 cgcggccgat ccggacggcc gccgacatcg ccagcggcaa ccaggacgcc aaggagctgt
      661 tcttcttcga catgatggcc gccggcatct ggatcgcccg ccgcggcttc gtggcgctca
      721 acatcatgat cggcgattca gaaggtgacc gctttgtggc ggcggtcgag gagttcgtca
      781 cggcacgaaa ggctcttttg cagccgcaat aaatacctac ataggcgcgc atgaacgacg
      841 cttcgcaccc ctccaagcct gccttcccgc agccggtctc gggcacggtg gtgccgcgct
      901 tcggcgacgt cgccactttc atgcgcatgc cgctgttccg cgatcctgcc gacgtcgaga
      961 tcggcatggt cggcgtgccg tgggacggcg gcacgaccaa ccggccgggc gcccgccacg
     1021 gcccgcgcca gatgcgcgac ctctcgacca tgatgcgccg ggtccaccac gtcaccggcg
     1081 tggcgcccta tgaactcgcc aaatgcggcg atctcggcga cgcgccggtc aatccggcga
     1141 gcctcgacga ttcgctgaag cggatcgaga ccttcttcac caagatccac gaagccggcg
     1201 ccgtgccctt gtcggccggc ggcgaccatc tgatcacgct gcccatcatg cgcgccatcg
     1261 ccaaagcggg cccgctcggc atggtgcatt tcgacgccca cagcgacacc tgggacacct
     1321 atttcggcgg ctacaagtac acccacggca cgccgttccg ccgcgccgtc gaggagggtc
     1381 tgctcgatcc caagcgcgtc gtgcagatcg gcatcagggg ctcgctctac aagcgcgacg
     1441 acaatctgtg ggcggtcgag cagggcatgc gggtgatcac catcgaggag tatttcgact
     1501 tgggcgtcga caaggtgatc gccgaggccc gccgcgtcgt gggcgacggc ccgacctatg
     1561 tcagcttcga cgtcgacggg ctggatcccg cctttgcccc cggcaccggc acgcccgaga
     1621 tcggcggcta caccccgcac gaggcccagc gcatgctgcg cggcctgcgc ggcctcgacc
     1681 tggtcggcgg cgacgtggtc gaggtctcgc cgcccttcga catgagcggc aacaccgcgc
     1741 tcgtgggcgt caccatgatg tgggagatcc tctgcctgct cgccgaatcg gtggccaggc
     1801 gcaagggccg cctctgaccc tcatggtctt ccggaccgcg cgcttccagt gcgctcatgt
     1861 cggcgcattc acatgcgcct catgagcggg ccagaggccc gcggtccgga agagcttgat
     1921 tcgctgttat tcgacgtcga cgctgcggca tcgccaccac cgcctatccc acaatggaaa
     1981 ggtccatctg cacttcgcgc accagcacct tgggagcgac ggagccgcgc ttgccgggaa
     2041 cgagctttac caagccgtac tggctcatgg tcttgagcgt gcgcgataga ttgctcgctc
     2101 tcctgccggt cagcacctcc agctccgcga tcgaagaggg gcgccgctcg tcaatgatcc
     2161 gcagcagctt gcggttcggc tccgatagga cctttgcaag ggactccagc gacgtgaacc
     2221 aaattttggg ttcactcggc cgccgacggc gctccccgcg cgcgatctgc aaagcgcgct
     2281 cacgaagctc atgatgggtc gcaatgccga ccttggtttt ctcagtcatc gttcggctcc
     2341 tttaggatgc gcgcgatttc atcgaagaaa tcggcaatca gcttctcggc gctcacgaac
     2401 cggtagggct gcccttcgtc ggtttcgtta cggtgccaat ggtcgaacgc cgcgtgccga
     2461 ctgacaaacc tgccgccacg gtgaggaacc ctgtgggcat tgtcgtaacc catcagccgc
     2521 cgcccatccg cggcatggaa ggtcagcgaa tacgaaacac cgtgaggctt ctctggcgtc
     2581 gcggcgatcc gcttgaccgt gaaccgtgct acgtatccgc cgtcgtaaat gatctcttcg
     2641 ccgtcgaggt cgagtaggta ggcaagagtt tcgtcctcgc caggcattgc ctatccatat
     2701 cagttagtga taggagtcgg caagcgcgcc gaagcgatcg ccaggcgcaa ggggcggctt
     2761 tagggtcttc ccacgcggcg gcgggggcca tgggccgttt ggcgcgtttc ggctcttgaa
     2821 tcgcgaggct ttccgtcctt tgctggcgtc gacgccatgg ctagccctcg tcgccgcctt
     2881 tccgcaatcc tccacgccga tctcgccggc ttcgtccggc tgaccgaagg cgaggaggat
     2941 ctcaccttcg cccatctcaa gtcggcgcga agcgacgtct ggcggccggc catcgagacc
     3001 gccggcggct cgctggtcca cagcgcgggc gatgccatgc tggtcgagtt cagttcggcc
     3061 cttgccgcgg tcacggcggc aatcgacatc caggagcgca tggcgcgatt caacgaggcg
     3121 ctggacgagg accagcaaat gttgtttcgc atcggggtgc atctgggcga ggtcatcgtc
     3181 gacgaggaga gccacgacct gttcggcgac ggcgtgaacc tcgccgcacg catccaggtc
     3241 atggccgagc cgggcggcgt cgccgtgtcg cgcgcggtgc gcgacgtcac cgagctgcag
     3301 gtcgactacg cgttcatcga tggcggcgag caccgggcga agaatgtgag ccggccgctt
     3361 cacatcttcc atgtgcgggc tcaggtaggc gtctcgacgc agaccacgac ctcggtcctg
     3421 ccgcacacga agctgcgatt ccacggcgcc gacatggcgg gccgcaggtt cggcttcgac
     3481 ctgcaattcg agaggctgat gaccaagcgg gaaggcttcg tgattggccg cgatgtggac
     3541 cactgcgacg cggttctgtc gcatccgacc gtgtcgcggc gccatgcgcg gctggttctt
     3601 gccgacaacg tcctgcagat cgaggacctc ggctcgacca acggtacggc gatcgacggc
     3661 gccgccgtgg gggccggcgc gcagcggccg cttgcggccg gcgccacgct caggatcggc
     3721 gatatcgaac tcgccttccg ctacagctga agggcgcgga atctcgcgtg gcgccgctgg
     3781 ccgcgaaccg cgccggtcgg cgctgcgtcc ggcaggctgc caaggcagcg cggccggggg
     3841 cgaccgccca aagacctctc atagtgatac taatgaaaga gtttgaccat atttaagaat
     3901 atgcttatcc tacgctcgaa cgcgtctcac cccagtgggg cagaggcgac gacgaaagga
     3961 ttggcatatg cccaatgaca ttcactccgt gacctccacc gccaccggcg gctggcccga
     4021 gatcgagccc agcctgcacg aggacggccg gccgctcgtc ccgtcgttcc cgctcgatgt
     4081 cctgccgcag ccatggcgcg gctgggtcgc agacaccgcg catagtgccg gcgcgcccga
     4141 cgactacgtc gcgcaggcct tgctgtccgc cgtggccggc ctctgcggcg cgggcgtgcg
     4201 cgcacaggtg acttcggcat ggtccgagcc gctagtgctg tggcaggcgc tggtcggcgg
     4261 gccgtcgagc ggcaagacgg cggcgctgga gacgatccgc cagccgctcg ccaccgtcga
     4321 gaagctgctg cagcgtgacg ccgccgcggc gaataccgag cgacacctgc gaattgtgac
     4381 cggcgatgcc gcgctttcag cgctgacggg ggccttgaag gaccgtcccg cgggcgtgct
     4441 gttgtggcgc gacgatccct cggcctggct cgccggcctc ggccgcgacg ccaagaccaa
//
LOCUS       DASWGA010000995         3582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1514455, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000995 DASWGA010000000
VERSION     DASWGA010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1514455"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..930)
                     /locus_tag="VF991_22780"
     CDS             complement(<1..930)
                     /locus_tag="VF991_22780"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX9559336.1"
                     /translation="MTTARRSISAASAWDRVCSGVGYHLDNLGRWLIVNAPSIGSAYA
                     AFLAPGVPRLKPRPGWMFAEEYYDQRRWLACRRGALWEAAREKELAVPITVRWHGGTT
                     VDLTLGNDNSLCLYVCGSFEPNEFAFLDRVLRPGMVFVDVGANDGYYTLFAARRVGPS
                     GRVVAAEPSSRERAHLQRNLGRNGLDNVSVVPAAIGAAAGLADLHLAHGVHAGHNTLG
                     GFAHDDVVRASLERVPIEPLDAVVARLGLAKVDFVKIDVEGAEARVIAGATAMLTSMR
                     PLMLIEVNDKALRAQDNCADALMATLREDLRYEI"
     gene            1081..2379
                     /locus_tag="VF991_22785"
     CDS             1081..2379
                     /locus_tag="VF991_22785"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX9559337.1"
                     /translation="MSIPHHPAGAMSALFLRTLLVIVVTLSPAVALAQGLRVVARVND
                     DAITDFDLSQRVLFAIRTTGLQDSPELRQRMATQILRQMIDEHLQIQDAKRLGLKTTD
                     GELQQRFGDIERAAGMSRGQFRQYLQSVGVPYEIAVQQIDAQIAWTKIIRRKVRPQVD
                     VSEAEIDDAMSRMRSNVGKTEARVAEIFVPIDRAELADEAKRSADRIVEQLKRGAPFG
                     AVAQQFSQGATAQAGGELGWVLPGSLDPSLDGSIEKLQVRQYSEPIRSSSGWHIVYVI
                     DRRQFAATRADDMRLNLTQMTLPLPVNATPDEVAKATAEAQKAMAGVKGCTDLHARSR
                     ELKGATSGDLTGVRVGDLAANRQMFEEIPKLNVGSTAGPFRVAEGLQVVALCGKVGGD
                     GLPTRDVVGQQILLQKLEGAGRRYMRDLRRQATIDVKQPS"
     gene            2376..3374
                     /gene="pdxA"
                     /locus_tag="VF991_22790"
     CDS             2376..3374
                     /gene="pdxA"
                     /locus_tag="VF991_22790"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEX9559338.1"
                     /translation="MTVAAPLAVTMGEPAGIGGELTLKAWSLRGPGARPFFAIDDGAR
                     LSGLAAKLGLDVAVREIARPSDAGLVFETALPVLPVRLRIPVQAGHPDPVNAPATLEA
                     IERAAKLALAGEVAGMVTNPIQKKTLQDAGFGHPGHTEYLAELAGGVEVAMMLACPEL
                     RVVPVTIHLSLAEAVRTLDTAKIVRAGRIAAAGLRSLFGIARPRLAVAGLNPHAGEQG
                     SMGDEEARVIAPAIEILRRDGLDASGPAPADTLFHPAARARYDAALCMYHDQALIPIK
                     TVDFAGGVNVTLGLPFVRTSPDHGTALDIAGTGRADPASLLAALSMADDMARRRQT"
     gene            3389..>3582
                     /locus_tag="VF991_22795"
     CDS             3389..>3582
                     /locus_tag="VF991_22795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014327834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HEX9559339.1"
                     /translation="MDALARLPPLRETIAAHGLDARKRLGQHFLLDLNLTRRIARAAA
                     PLGEGTVIEVGPGPGGLTRAL"
BASE COUNT          583 a         1234 c         1200 g          565 t
ORIGIN      
        1 tatctcgtag cgcagatcct cgcgcagcgt cgccatgagg gcatcggcgc agttgtcctg
       61 ggcgcgcagt gccttgtcgt tgacctcgat cagcatcagc ggacgcatcg aggtcagcat
      121 ggccgtcgcg ccggcaatga cgcgcgcctc ggcgccctcg acgtcgatct tgacgaagtc
      181 gaccttggcc aggccgaggc gggcgaccac cgcgtcgagc ggctcgatcg gcacccgctc
      241 gaggctggcg cgcaccacgt cgtcgtgcgc aaagccgccc agcgtgttgt ggccggcatg
      301 aacaccgtgg gccagatgaa ggtcggcaag cccggcggcg gcgccgatgg cggccggcac
      361 gaccgagacg ttgtccaggc cgttgcgtcc cagattgcgc tgcagatgcg cgcgctcgcg
      421 cgaactgggc tcggccgcca cgacccggcc cgacggcccg acgcggcgcg cggcgaacag
      481 cgtgtaatag ccgtcgttgg cgccgacatc gacgaagacc atgcccggtc gcagcacgcg
      541 atccaggaag gcgaattcgt tgggttcgaa ggagccgcag acataaaggc aaaggctgtt
      601 gtcgttgccc agcgtcaggt cgaccgtggt gccgccgtgc cagcgcacgg tgatcggcac
      661 ggcgagctcc ttctcccggg cggcttccca cagggcgccg cgccggcagg cgagccaccg
      721 gcgctgatcg tagtactcct cggcaaacat ccagcccggc cggggtttca ggcgcggcac
      781 gcccggtgcc aggaaggccg cgtaggccga tccgatcgac ggagcgttca cgatcagcca
      841 ccggccgaga ttatcgaggt gatagcctac gcccgagcaa acgcggtccc atgcgctggc
      901 ggcgctgatc gagcggcgcg cggtggtcat tcggtggatc gttgccccct ttatcccctg
      961 cccgatgtgc cgtgttcggc taaaccaccg gctgcctagc gtcaagcgcg cctgtatctt
     1021 gccatagtcc cactctaagg gctcgcgttc cgttgcagca aaactgtcgc ggaacatata
     1081 atgtcgatcc ctcatcaccc tgccggtgca atgtccgcgc tgttcctccg cactcttctc
     1141 gtcatcgtcg tcacgttgtc tccagctgtc gcattggccc aaggcctgcg cgtggtggcg
     1201 cgggtgaacg acgacgccat caccgatttc gacctgtccc agcgggtgct gttcgccatt
     1261 cggacgacgg gcctgcagga cagtccggag ctgcgtcagc gcatggccac ccagatcctg
     1321 cgccagatga tcgatgaaca cctgcagatc caggacgcca agcggctggg gctgaagacc
     1381 accgacggcg agctgcagca gcgctttggc gacatcgagc gtgccgcggg catgtcacgt
     1441 ggccagttcc ggcaatacct gcagagcgtc ggcgtcccct acgagatcgc cgtccagcag
     1501 atcgatgcgc agatcgcctg gaccaagatc atccgccgga aagtcaggcc ccaggtcgac
     1561 gtctcggaag ccgagatcga tgatgcgatg agccggatgc gatcgaacgt cggcaagacc
     1621 gaagcgcggg tggccgagat cttcgtgccc attgaccggg ccgagctcgc cgatgaagcc
     1681 aagcgcagcg ccgaccgcat tgtcgagcag ctcaagcgcg gggcgccgtt cggcgccgtc
     1741 gcccaacagt tctcgcaggg cgcgacggcc caggcgggcg gcgagctcgg ctgggtattg
     1801 cccggatcgc tcgatcccag cctcgacggc tcgatcgaaa agctgcaggt caggcagtat
     1861 tcagagccga tccgcagcag ctcgggctgg catattgtct acgtgatcga ccgccgccag
     1921 tttgcggcga cgcgagccga cgacatgcgt ctcaacctga cgcagatgac gctgcccctg
     1981 ccggtcaacg ccacgccgga tgaggtcgcc aaggcgaccg ccgaggccca gaaggcgatg
     2041 gccggcgtaa aaggctgcac cgacctccat gccagatcgc gcgagctcaa gggcgcgacc
     2101 tcgggcgatc tcaccggcgt ccgggtcggc gatctggcgg ccaatcgcca gatgttcgag
     2161 gagattccca agctgaacgt gggcagcacg gccgggccat tccgggtcgc cgaaggactg
     2221 caggtcgtgg cgctgtgcgg caaggtcggt ggcgacggcc tgccgacgcg cgacgtagtt
     2281 ggccagcaga ttctgctgca gaaactcgaa ggtgccgggc gtcgctacat gcgcgacctg
     2341 cgccgccagg cgaccatcga cgtcaagcag ccatcatgac cgtcgccgcg ccgctcgccg
     2401 tgacgatggg cgagccggcc ggcatcggcg gcgaactcac cctaaaagcc tggtcgttac
     2461 gcgggcccgg tgcgcggccg ttctttgcga tcgacgatgg cgcgcgcttg agcggtctcg
     2521 ccgccaagct cggtctcgac gtcgctgtgc gagaaatcgc gcggccgtcg gacgccggtc
     2581 ttgtcttcga aacagcgttg cctgtcttgc cggttcggct gcgcatcccc gtgcaggctg
     2641 gccatcccga tcccgtcaac gcgccggcaa ccctcgaggc gatcgagcgc gccgccaagc
     2701 tcgcccttgc cggggaggtt gccggcatgg tgaccaatcc catccagaag aagaccctcc
     2761 aggatgcggg cttcggacat cccggccaca cggaatacct cgccgagctg gccggcggcg
     2821 tcgaggtcgc catgatgctg gcttgccccg agctgcgggt cgtgccggta accatccacc
     2881 tgtcgctggc cgaagcggtg cgcacgcttg acaccgccaa gattgtgcgg gcgggccgca
     2941 tcgccgcggc ggggttgcgg tccttgttcg gcattgcgcg cccccggctt gccgttgccg
     3001 gactcaatcc tcatgccggt gagcaaggct cgatgggtga tgaggaagcc cgggtgatcg
     3061 cgccggcgat cgagatcctg aggcgtgacg gcctcgacgc cagcggtccg gcgccggccg
     3121 atacgttgtt ccatccggct gcccgcgcgc gctatgacgc ggccctctgc atgtatcacg
     3181 accaggctct gatcccgatc aagaccgtgg attttgccgg cggcgtcaac gtcacgctgg
     3241 gcctgccctt cgtgcggacg tcgccggacc acggcacagc gctcgatatc gctgggaccg
     3301 gccgcgccga tccggcaagc ctgctcgcgg cgctcagcat ggcggacgac atggcccgcc
     3361 ggcgccagac ctgaacgccc gaccggacat ggacgcgctc gcccggctgc cgccgttgcg
     3421 cgagaccatc gccgcccatg gcctcgacgc gcgcaagcgc ctgggccagc atttcctgct
     3481 tgacctcaac ctcactcggc gcattgcccg cgccgccgcg ccgcttggcg agggaacggt
     3541 gatcgaggtc ggacccggtc ccggcggact gacgcgcgca ct
//
LOCUS       DASWGA010000996         3408 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1514719, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000996 DASWGA010000000
VERSION     DASWGA010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3408
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1514719"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1059)
                     /locus_tag="VF991_22800"
     CDS             complement(<1..1059)
                     /locus_tag="VF991_22800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HEX9559340.1"
                     /translation="MPEGRAAAPQPRHPGSSRRKGRTVPKGRQVEPAALEEVRALLGD
                     AERRRDLLIEFLHLIQDKYRHLSARHLVALADELHMAQAEVYEVATFYAHFDVVREGE
                     TPPPPLTIRVCDSLSCALAGAEDLLAALQSSRESGVRVVRAPCVGHCQAAPVAEVGHH
                     FVDHADPAKVAQAVKEHRHHPEIPSYIDLAAYRAAGGYRTLARLRSGELSREKLVEIV
                     DQAGLRGCGGAGFPTARKWRSVLGEPGPRLMAVNADEGEPGTFKDRYFLETDPHRVLE
                     GMLIGAHLVEAPEIYFYLRDEYPACREILMREIAALEAAGLASHATIHLRRGAGAYIC
                     GEESAMLESIEGRRGLPRH"
     gene            1164..2021
                     /locus_tag="VF991_22805"
     CDS             1164..2021
                     /locus_tag="VF991_22805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9559341.1"
                     /translation="MSVHPALAAGRVAVVSGAASGIGLAAARRFASMGLKVCLADLSA
                     EALERAAAEVAAVATAGPTSVLAVPTDVSRLDSVQALQERVYAAFGEVAVLMNNAGTA
                     PGGGPWDHIDRWRRVLEVNLWGVIHGVQTFAPAMLAQKSPGAIVNTGSKQGITCPPGD
                     TAYNVSKAGVKVLTEALAHSLRNEEGARISAHLLIPGSTFTGMTSRGRTEKPAGAWTP
                     DQVIDMLIAGMNQDDFYILCPDNDVTREIDNRRILWAAQDITENRPPLSRWHADYKVA
                     FDQFLHAEK"
     gene            2024..2752
                     /gene="msrA"
                     /locus_tag="VF991_22810"
     CDS             2024..2752
                     /gene="msrA"
                     /locus_tag="VF991_22810"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX9559342.1"
                     /translation="MSASPLVRQTVPLLVIGTLLVLTAFGLGILPTSAETARVVPAPA
                     ADEPAGPATAETAVLAGGCFWGVQGVFQHVEGVTSAVSGYAGGAKETAGYDKVGSGRT
                     GHAEAVRIAYDPRKITFGRLLQIYFSVAHDPTELNRQGPDVGPQYRSTIFPTNDEQAR
                     VAKAYIEQLDLAKIFGAKVVTTIEPGRAFYPAEAYHQDYLTLHPNQPYIVIHDLPKVA
                     NLKRLFAESYRAEPVLVARTGPSN"
     gene            complement(2774..3229)
                     /locus_tag="VF991_22815"
     CDS             complement(2774..3229)
                     /locus_tag="VF991_22815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9559343.1"
                     /translation="MAKPIPEGYHAVTPYLMVRHGAKAIEFYVNAFGAVERDRMQDPS
                     GKIRHAEITIGDSRVMLADEHPESGALAPETIGGSPVGLHLYVEDVDAVVAKAVAAGA
                     TLTRPVADQFYGDRVGGITDPFGHRWFIATHKEDLTMDEIRQRAAAQGH"
BASE COUNT          551 a         1169 c         1133 g          555 t
ORIGIN      
        1 gtgccgcggc agtccgcgcc ggccttcgat gctttcgagc attgccgatt cttcgccgca
       61 gatataagcg ccggcgccgc ggcggagatg gatcgtcgcg tgcgatgcga gccccgccgc
      121 ctcgagggcg gcgatctcgc gcatgaggat ttcccggcag gccgggtatt cgtcgcggag
      181 atagaagtag atctccggcg cctcgaccag gtgcgcgccg atcagcatgc cctccaagac
      241 gcggtgcgga tcggtctcca ggaaataacg atccttgaag gtgccgggct cgccttcgtc
      301 ggcattgacc gccatcaagc gcggcccggg ttcgcccagc accgaccgcc atttgcgcgc
      361 cgtcgggaag cccgcgccgc cgcagccgcg caagcctgcc tggtcgacga tctccaccag
      421 cttctcgcgg ctcagctcgc cgctgcgaag acgtgccagc gtgcgataac cgccggcagc
      481 gcgataggct gcgagatcga tgtacgacgg aatctcggga tggtgccgat gctctttgac
      541 cgcctgggcc accttggccg ggtcggcatg gtcgacgaag tgatggccga cttcggcgac
      601 cggcgcggcc tggcaatggc cgacgcaggg cgcccgcacc acgcggactc ccgattcccg
      661 gcttgattgc agcgccgcga gcagatcctc ggcgccggca agcgcgcagg acaggctgtc
      721 gcagacccgg atggtgagcg gaggtggcgg cgtctcgcct tcgcgcacca catcgaaatg
      781 cgcataaaag gtcgcgacct catagacctc ggcctgggcc atgtgcagct cgtcggccag
      841 ggccaccaga tggcgcgccg agagatggcg gtatttgtcc tggatgaggt gcaggaattc
      901 gatcaggaga tcgcgccgcc gctcggcgtc gccgagcagg gcccggactt cctccagcgc
      961 ggccggttcg acctggcggc ccttcgggac cgttcgcccc ttgcggcgac tcgagccggg
     1021 atggcgcggc tgaggcgcgg cagctcggcc ttcaggcaaa atccattctc cttgacacac
     1081 gcagtgtatg tgaccctaac gctgcccgct cggcagcgtc aacgcggcca atgtatgatg
     1141 agaccaaccg aaggagtagc ccgatgagcg ttcatcctgc ccttgccgcc ggtcgcgtcg
     1201 cggtcgtgtc cggggcagcg agcggcatcg gcctcgcggc cgcgcgccgc ttcgcctcga
     1261 tgggcctgaa agtgtgcctg gccgacttgt cggcggaggc gctcgagcgc gccgccgcgg
     1321 aggtcgccgc cgtggcgacg gcgggaccga cgtcggtcct cgccgtgccg accgatgtca
     1381 gccgcctcga cagcgtgcag gccctccagg agcgggtcta tgccgcgttc ggcgaggtcg
     1441 cggttctgat gaacaatgct ggcaccgcgc cgggcggcgg gccgtgggac catatcgacc
     1501 gctggcggcg cgtgctggag gtcaatctct ggggcgtcat ccacggcgtg cagaccttcg
     1561 cgcccgccat gctggcgcag aagagccccg gcgccatcgt caataccggc tccaagcagg
     1621 gcatcacctg tccgccgggc gacaccgcct acaacgtcag caaggccggc gtgaaggtgc
     1681 tgacggaagc gctggcgcac agcctgcgca acgaggaagg cgcgcgcatc tcggcgcatc
     1741 tgctgatccc gggctcgacc ttcaccggca tgaccagccg cggccgcacc gagaagccgg
     1801 ccggcgcctg gacgccggac caagtaatcg acatgctgat cgcggggatg aaccaggacg
     1861 atttctatat cctctgcccc gacaatgacg tgacgcgcga gatcgataac cgccgcatcc
     1921 tgtgggcggc gcaggacatc accgagaacc gtccgcccct gtcgcgctgg catgcggact
     1981 acaaggtcgc cttcgaccag ttcctgcacg cggagaaata gccatgtctg cttcgcccct
     2041 tgttcgtcag accgtcccgc tcctggtcat tgggacgctg ttggtgctga cggccttcgg
     2101 cctgggaatc ctgcccacct ccgccgagac cgcgcgcgtc gttcccgcac cggcggccga
     2161 cgagcccgcc gggccggcga cggctgagac ggccgtcctc gccggcggct gcttctgggg
     2221 cgtacagggc gtgttccagc atgtcgaggg cgtgaccagc gccgtctccg gctacgccgg
     2281 cggcgccaag gagacggccg gctacgacaa ggtcggcagc gggcgcaccg gccatgccga
     2341 agcggtgcgc atcgcctacg acccgcgcaa gatcaccttc ggccgcctgc tgcagatcta
     2401 cttctcggtc gcccacgatc cgaccgagct caatcgccag ggtcccgatg tcggcccgca
     2461 atatcgctcg acgatcttcc cgaccaacga cgaacaggcg cgcgtggcca aggcctacat
     2521 cgagcagctc gacctggcga agatcttcgg tgccaaggtc gtcaccacca tcgagcccgg
     2581 ccgcgccttc tatcccgccg aggcctatca tcaggattac ctgacgctgc atcccaacca
     2641 accctacatc gtcatccacg atctgccgaa ggtggccaat ctgaagcgcc tgttcgcgga
     2701 gtcctatcgc gccgagccgg tgctggtcgc caggacaggc ccgtcgaact gacggaagcc
     2761 cattgcgact tgctcaatgg ccttgcgcgg cggcgcgctg gcggatttcg tccatggtga
     2821 ggtcctcctt gtgcgtggcg atgaaccagc gatggccgaa cggatcggtg atgccgccga
     2881 cccgatcgcc atagaactga tcggccaccg gacgcgtgag cgtggctccc gcggcgaccg
     2941 ccttggcgac gacggcatcg acatcctcga catagagatg gaggccgacc ggcgagccgc
     3001 cgatggtctc aggcgcgagc gcgccgctct ccggatgctc gtccgccagc atcacgcgcg
     3061 aatcgccgat ggtgatctcg gcgtggcgga tcttgccgct ggggtcctgc atcctgtcgc
     3121 gctcgaccgc gccgaaggcg ttgacgtaga actcgatcgc cttggcgcca tgcctgacca
     3181 tgaggtacgg cgtgaccgcg tgatagccct cgggaatggg tttggccatg cagctctcct
     3241 ttgcagggct ccattctgat gccagcgaga cgacgcgtat tgtaggtttt ttaccgggcc
     3301 cgcctgccga cggaaccagc cgtcactgcg gcacgtggtt catgtgctcc gtccggcgcg
     3361 agagatagtt ggcggggctc aagccggcaa agtcgcgaaa gtcgtgat
//
LOCUS       DASWGA010000997         4207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_119552, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000997 DASWGA010000000
VERSION     DASWGA010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4207
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119552"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..658)
                     /locus_tag="VF991_22820"
     CDS             complement(<1..658)
                     /locus_tag="VF991_22820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX9559344.1"
                     /translation="MPASHATHRSQLELILRAWGMPEATAASTAEIMSWADLHGIDTH
                     GISMVPPYDERRRAGRIDMGAQPTVARETPVSALIDGGGGLGHANARRAMALAIDKAK
                     ASGIGVCAVRNSAHFGACGFYALMAVEAGLIGMVTTSASGIQVAPTFGAQARFGTDPI
                     AFAAPGRPGEPFLLDMATTTVAAGKIRNKANENLPTPLGWLVTSDGKPSTDPREVSKG
                     G"
     gene            839..2428
                     /locus_tag="VF991_22825"
     CDS             839..2428
                     /locus_tag="VF991_22825"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HEX9559345.1"
                     /translation="MAGDIAIRTERPPHTTTSPVVETASGCVKGVTSDGVHVFKGIPY
                     GASTAGANRFMPPRKPEPWTGVRETIAYAGRSPQAAANAQRPELATVWGPVDTLPVDE
                     DCLTLHVWTPALDNSKRPVMVWLHGGAFSYGSANSPRYDSTRLARRNDVVVVAVNHRL
                     NVFGHLDLSEIGGERFAQSGNAGLLDLVLALEWVREHAARFGGDPGNVTIFGQSGGGG
                     KASALLAMRGAKGLFHKAIIQSGASVRFAERERTTRLADAVLKHLGLRPDQLDALQAL
                     PLARLQEAVAPAQATLPRPRHPLLDRYNFGPVIDGSVLPNQPFDPAAPAVSDGVPIMI
                     GGTKDEASIFLAPDDAVWNRTVTEDDLGKRIASVASDAAGGLLAYYKRRDPASSPSDR
                     LITALTASNFGVRSVLLAERKAARARAPVWMYSFDWETPAFDGRLKAPHSVDVPFVFD
                     TLGVIGEGHRTPAAQALADRVSKTWATFARNGDPANDAIPAWSAYAAGRRATMLLDDA
                     CKVVDDPDGEVRPLWSKVATA"
     gene            2439..3170
                     /locus_tag="VF991_22830"
     CDS             2439..3170
                     /locus_tag="VF991_22830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HEX9559346.1"
                     /translation="MNAHPDPAALDKLRTRIQGLRAKTIDNGCTEGEALAAAAKVAEL
                     LDRYDLSLTDVELRHAPCERRAYETHRKKRIPLDDCIGAIADFCDCRVWREKNRAGEA
                     RYVFFGLRSDIEVAHYLTELIDTAVRSELGRYKTTSDYQRFRHQERHVANASFALGMV
                     ASIADKLTAMKVARDEANIRTGRDLVVLKAAVVDGELEKLGLKLQIVSRTSRMVSTMA
                     YEAGEASGAALAFDPGIRKTYGSGS"
     gene            3471..>4207
                     /locus_tag="VF991_22835"
     CDS             3471..>4207
                     /locus_tag="VF991_22835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559347.1"
                     /translation="MELCVNHKFTTSPSADDIAHAIDATPHPEDWYLVLDADDGSYID
                     AAARPDGTYRVTASDGAHDLQVNAPLEANRVKEILFKFLAGDGGWRDMGFSPVPDSGA
                     KDGTAAAATGSGSPLPAWALAIVIGSIAIVVLAALLPVRAYLPFADSDYFYVGLVAAP
                     LVVLLIVAALAKMLDVRRAATWSTVAGRIVKADTQARRHRFAGEATTVKTVPVVEYEF
                     SAGGRTWRGSRISIGDDAGGAHTEATLR"
BASE COUNT          671 a         1454 c         1404 g          678 t
ORIGIN      
        1 atccgccctt gctgacctcg cgcggatcgg tgctgggctt tccgtccgac gtgaccagcc
       61 agccgagcgg cgtcggcaga ttctcgttgg ccttgttgcg gatcttgccg gcggccaccg
      121 tggtggtcgc catgtcgagc aggaagggct cgcccggacg gccgggtgcg gcaaaggcga
      181 tcgggtcggt gccgaagcgg gcctgggcgc cgaaggtggg cgcgacctgg atgccgctgg
      241 ccgacgtcgt caccatgccg atcaggcccg cctcgaccgc catcagggca tagaagccgc
      301 aggccccgaa atgcgccgag ttgcgcacgg cgcaaacgcc gatgccgctg gctttcgcct
      361 tgtcgatggc aagcgccatg gcgcgccgcg cattggcatg gcccagaccg ccgccgccat
      421 cgatcagcgc ggagaccggc gtttcgcggg cgacggtcgg ctgggcgccc atgtcgatcc
      481 ggccggcgcg gcggcgttcg tcgtagggcg gcaccatcga gatgccgtgc gtgtcgatgc
      541 cgtgcaggtc ggcccagctc atgatctcgg cggtgctggc ggcggtcgct tcgggcatgc
      601 cccaggcccg caggataagt tcgagctggc ttcgatgggt cgcgtgggac gcaggcatct
      661 tgtcttccct tggttggctt ccggagctgc atgaccttag caccggcgat cctgcgcccg
      721 tccatcagcg tgacaccctc gacagcagcg gttcgcagtg cggcggcgga cgcgcagcgt
      781 tgacggcgtc cggaggcgcg cgcaggctcc ggcaaacagc aacatgggag aacgcgtagt
      841 ggccggtgat atcgctattc ggacggagcg gccccctcac accacgacct cgccggtcgt
      901 cgagaccgca tccggctgcg tcaagggcgt cacgtctgat ggcgtgcacg tcttcaaggg
      961 catcccctac ggcgcctcga cggccggcgc caaccgtttc atgccgccgc gcaagcccga
     1021 gccgtggacc ggtgtccgcg agacgatcgc ctatgccggc cgttcgccgc aggcggccgc
     1081 caacgcacag cgaccggaac tggcgacggt ctggggaccg gtcgacacgc tgccggtcga
     1141 cgaggactgc ctgacgctgc acgtctggac gcccgcgctc gataattcga agcgcccggt
     1201 catggtctgg ctgcacggcg gcgccttctc ctacggctcg gccaactcgc cgcgctacga
     1261 cagcaccagg cttgcccggc gtaacgacgt ggtggtcgtc gccgtcaatc atcggctgaa
     1321 tgtcttcggc cacctcgatc tttccgagat cggcggcgag cgtttcgccc aatccggcaa
     1381 tgccggcctg ctcgatctgg tgctggcgct cgagtgggtg cgcgagcacg ccgcgcggtt
     1441 cggcggcgat ccgggcaatg tgacgatctt cggccagtcg ggcggaggcg ggaaggcgag
     1501 cgcactactg gcgatgcggg gcgcaaaggg gctcttccac aaggcgatca tccagagcgg
     1561 cgccagcgtg cgctttgccg agcgcgagcg cacgacgcgg ctcgccgacg cggtgctgaa
     1621 acatctcggc ctgcgtcccg accagctcga cgcgctacag gcgttgccgc tggcgcgcct
     1681 gcaggaggcg gtcgcgccgg cgcaggcgac gctgccgcgt ccgcgtcatc cgctgctcga
     1741 ccgctacaat ttcgggccgg tgatcgacgg aagcgtgctg cccaaccagc ccttcgatcc
     1801 cgccgcaccg gccgtgtccg acggcgtgcc gatcatgatc ggcggcacca aggacgaggc
     1861 ttcgatcttc ctcgcgcccg acgatgcggt gtggaaccgc accgtcaccg aggacgatct
     1921 cggcaagcgc atcgcttccg tcgccagcga cgcggccggc ggcctgctgg cctactacaa
     1981 gcggcgcgat cccgcctcga gcccctccga ccggctgatc acggcgctca ccgcatcgaa
     2041 cttcggcgtc cgctcggtgc tcctggccga gcgcaaggcc gcccgcgcca gggcgcccgt
     2101 ctggatgtac agcttcgact gggagacgcc ggcgttcgat gggcggctga aggcgccgca
     2161 ctccgtcgac gtgccgttcg tcttcgatac gctcggcgtg atcggcgagg gtcaccgcac
     2221 gccagccgct caggcgctgg ccgaccgcgt ctcgaagacg tgggctacct tcgcgcgcaa
     2281 tggcgatccg gccaacgatg cgatcccggc gtggtcggcc tatgccgccg ggcggcgcgc
     2341 cacgatgctt ctcgacgacg cgtgcaaggt cgtggacgat cccgatggcg aggtgcggcc
     2401 gctctggagc aaggttgcga ccgcctgacg ctgcatccgt gaacgcacac cccgatccgg
     2461 ccgccctcga caagctcagg acgcgaatcc aggggctgcg cgccaagacc atcgacaacg
     2521 gctgcaccga aggcgaggcc ctggccgccg ccgccaaggt cgccgagctg ctcgaccgct
     2581 acgacctgtc gctgaccgac gtcgaactcc gccatgcgcc gtgcgagcga cgcgcctatg
     2641 agacgcaccg caagaagcgt attcccctcg acgactgcat cggcgccatc gcggatttct
     2701 gcgattgccg cgtctggcgc gaaaagaacc gcgccggcga agcgcgatac gtgttcttcg
     2761 gcctgcgctc cgacatcgaa gtggcgcact atctgaccga gctgatcgat acagcggtcc
     2821 ggtccgagct cggccgctac aagaccacct cagactatca gcggttccgg caccaggagc
     2881 ggcacgtggc gaatgcgtct tttgcgctgg gcatggtcgc gtccatcgcc gacaaactga
     2941 cggcaatgaa ggtggcgcga gatgaggcga acatccgcac agggcgcgac ctcgtcgtcc
     3001 tcaaggcagc ggtcgtcgac ggcgaactcg aaaaactcgg tctgaagctg caaatcgtaa
     3061 gccgcaccag ccggatggtg tcgacgatgg cctacgaggc cggtgaggct tcaggcgcag
     3121 cactggcctt cgatccggga atccgaaaga catatggatc gggctcatga gggcacgctg
     3181 cgctcgagtt atccagaaac agaataggca cccatcggga gcgaccaaat tggggtctgg
     3241 cctgactgat gcgaccctcg gtggccgccc ccggcgtgcc gtccgtatgt tcccgctatg
     3301 ctgatgcccg aacgtgtgcg ccagcaatcg tcgcggcacg ttcacccggt ggaagcatct
     3361 aaacctccgt gtcggacctc agatccagga atccagccac gagacggccc tcctgtcaac
     3421 gtcgtgcgag gtgttatcgt agcgatgcga tcatagcgca ggccacgcct gtggaacttt
     3481 gcgtcaacca caagttcaca accagtccgt ccgccgacga catcgcacat gcgatcgacg
     3541 ccacgccgca ccccgaggac tggtaccttg ttctcgatgc cgacgacggc tcctacatcg
     3601 acgcagccgc ccggcccgac ggcacatacc gcgtcaccgc gtccgatgga gcacacgatc
     3661 tgcaggtcaa cgcgccgctc gaggcgaacc gggtaaagga gatcctgttc aagttcctcg
     3721 caggcgatgg cggctggcgc gacatgggct tttcgccggt ccccgactcg ggggccaagg
     3781 acgggactgc cgccgccgct actggcagcg gatctccact gccggcctgg gcgctggcga
     3841 tcgttatcgg ctcgattgcc atcgtcgtcc tcgccgccct gcttccggtg cgggcctatc
     3901 ttccgtttgc cgattccgac tacttctatg tcgggctggt cgccgcgccg ctggtcgtgc
     3961 tgttgattgt cgccgcgctc gccaagatgc tcgacgtgcg gcgggctgcc acctggtcga
     4021 ccgtggccgg ccggatcgtg aaggccgata cgcaagcgcg ccgccatcgc ttcgccggcg
     4081 aggccacgac ggttaaaacc gtcccggtcg tcgaatacga attctccgcg ggcggtcgca
     4141 cctggcgcgg cagccgcatc agcattggcg acgatgccgg cggcgcccat accgaggcga
     4201 cgcttcg
//
LOCUS       DASWGA010000998         2524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1256267, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000998 DASWGA010000000
VERSION     DASWGA010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256267"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..994
                     /locus_tag="VF991_22840"
     CDS             59..994
                     /locus_tag="VF991_22840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9559348.1"
                     /translation="MSPATSLAIDVHDLVKRFGSRTVVDRLSLSIEQGRICGFLGPNG
                     SGKTTTLRMICGLLTPDGGGGTCLGHDLVRERAAIKRHTGYMTQRFGLYEDLTIRENL
                     EFVGRVYDLDRVKERVDASLDRLGLATRQNQLAGALSGGWKQRLALAACVLHEPRLLL
                     LDEPTAGVDPKARRAFWDEIHGYAAQGITVLVSTHYMDEAERCHEIAYIAYGELMARG
                     TAADIIRQSGLIAFVASGPGADRLAATLRDAPGVTAAAAFGTTLHVCGPDRAALLKAI
                     EPYRGDPSLKWEESEPTLEDIFIHLMGKARDNADA"
     gene            1022..2158
                     /locus_tag="VF991_22845"
     CDS             1022..2158
                     /locus_tag="VF991_22845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9559349.1"
                     /translation="MLLTGFWRRLAAIISKEVLQLRRDRLTFAMMFGMPIAQLLLFGY
                     AIDADPHRLPTAVLAADQSQITRTVLAALANTGYMRFTHRPKSEAEANALLESGEVQF
                     VITIPSDFTRRLVRGERAQVLIDADATDPMAAANPLAAATPAINQALARDLVGPLIGL
                     RDKAESVDVVLQRRYNPEGKSRLNIVPGLLAVILTMTMVMMTALAVTRERERGTMENL
                     LAMPVRPIEVMIGKIVPYIAIGAVQVVVILVVSWLLFGVGVRGSLVLFCLGTALFITA
                     NLAIGFTISTLTQNQLQAMQASFFMMLPSILLSGFMFPFRGMPQWAQWIGEGLPATHF
                     MRIVRGLMLKGAGFGSISAELAALLAILLIVSTLAISRYRVTLD"
     gene            complement(2137..>2524)
                     /locus_tag="VF991_22850"
     CDS             complement(2137..>2524)
                     /locus_tag="VF991_22850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559350.1"
                     /translation="APAEYVATLLEAAALLDNGRHRPGGVVVLDQVNPLPFMLGWAPP
                     RGGNLWSGPAAPVQPAAQQFAEADYVLIPKFSTYSAWTERARLEYGDYLAQNFPNREE
                     SQSWILLSRAAASAAEHGPPQSSVTR"
BASE COUNT          379 a          886 c          835 g          424 t
ORIGIN      
        1 aatcgccctt gccggctggc ctgccggtca gcgtggagcc gctgacggac agccagccat
       61 gagtccagca acgagcctgg cgatcgacgt gcacgatctc gtcaagcgct tcggatcgcg
      121 caccgtggtc gaccgtttga gcctgtcgat cgagcagggc cgcatctgcg gcttcctggg
      181 gcccaacggc tcgggcaaga ccacgacctt gcgcatgatc tgcggcctgc tgacgcccga
      241 cggcggtggc ggcacctgcc tcggccacga cctggtgcgc gagcgcgcgg cgatcaagcg
      301 ccacaccggc tacatgaccc agcgcttcgg cctctacgag gatctcacca tccgcgagaa
      361 cctcgaattc gtcggccgcg tctacgatct cgaccgcgtc aaggagcggg tcgatgcctc
      421 gctcgaccgg ctcggcttgg cgacgcggca gaaccagctg gcgggtgccc tgtcgggcgg
      481 ctggaagcag cggctggcgc tggccgcctg cgtgctgcac gagccgcgcc tgctcttgct
      541 cgacgagccg accgccggcg tcgatcccaa ggcgcgtcgc gcgttctggg acgaaatcca
      601 tggctatgcc gctcagggca tcaccgtgct ggtctcgacc cattacatgg acgaggccga
      661 gcgctgtcat gagatcgcct acatcgccta cggcgagctg atggcgcgcg gcaccgccgc
      721 cgacatcatc cgccagtccg gcctcatcgc cttcgtcgcc agcggccccg gcgccgaccg
      781 cctggcggcg accttgcgtg acgcgcccgg cgtgaccgcc gcggcggcct tcggcacgac
      841 gcttcatgtc tgcggccccg atcgcgcggc gctattgaag gcgatcgagc cctatcgcgg
      901 cgatccctct ctcaagtggg aggagtcgga gcccacgctc gaggacatct tcatccatct
      961 gatgggcaag gcgcgagaca atgcggacgc ttgatctcat tggagcgcgg agagatcagc
     1021 catgttgctg acgggcttct ggcggcggtt ggccgccatc atctccaagg aagtgttgca
     1081 gctgcggcgc gaccggctga ccttcgccat gatgttcggc atgccgatcg cccagctcct
     1141 gctgttcggc tacgcgatcg atgccgatcc gcaccgcctg ccgaccgccg tcctggcggc
     1201 cgaccagagc cagatcacgc gcaccgttct cgccgccctc gccaacaccg gctacatgcg
     1261 cttcacccac cggcccaaga gcgaggccga ggccaacgcg ctgttggaga gcggcgaggt
     1321 gcagttcgta atcaccatcc cctcggactt cacgcgccgg ctggtgcgcg gcgagcgcgc
     1381 acaggtgctg atcgacgccg acgccaccga cccgatggcg gcggccaatc cgctggccgc
     1441 ggcgacgccg gccatcaatc aggcactggc gcgcgacctg gtcgggccgt tgatcggcct
     1501 gcgcgacaag gccgagtcgg tcgatgtcgt gctgcagcgc cgctacaatc cggagggcaa
     1561 gtcgcggctc aacatcgtgc ccggcctgct cgcggtgatc ctcaccatga ccatggtgat
     1621 gatgacggcg ctcgccgtca cccgcgagcg cgagcgcggc accatggaga atttgctcgc
     1681 catgccggtg cggccgatcg aggtcatgat cggcaagatc gtgccctata tcgccatcgg
     1741 cgcggtccag gtcgtggtca tcctggtggt ctcctggctg ctgttcggcg tcggcgtgcg
     1801 gggcagcctc gtcctgtttt gcctcggcac ggcgctgttc atcaccgcca acctggccat
     1861 cggcttcacc atctcgacgc tgacccagaa ccagctccag gccatgcaag cctcgttctt
     1921 catgatgctg ccgtcgatcc tgctgtcggg cttcatgttc ccgttccgcg gcatgccaca
     1981 atgggcgcaa tggatcggcg aagggctgcc ggccacccac ttcatgcgga tcgtgcgcgg
     2041 cctgatgttg aagggcgcgg gcttcggcag catctccgcc gagctggccg cgctgctggc
     2101 gatcctgctg atcgtgtcga ccctggcgat cagccgctat cgcgtgacgc tcgactgagg
     2161 aggcccgtgc tcggccgcgc tggcagccgc gcggctcagc aggatccagc tctggctctc
     2221 ctcgcggttg ggaaaattct gcgccaggta gtcgccgtat tcgagccgcg cgcgctcggt
     2281 ccacgcactg taggtcgaga atttcgggat caggacatag tccgcctcgg cgaactgctg
     2341 ggccgccggc tgcaccggcg ccgccggtcc ggaccaaaga ttgccgccgc gcggcggtgc
     2401 ccagcccagc atgaagggca agggattgac ctggtcgagg accacgacgc cgccgggtcg
     2461 gtggcggccg ttgtcgagca aggctgccgc ctccagcagg gtggcgacat actcggccgg
     2521 cgcg
//
LOCUS       DASWGA010000999         4874 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_357589, whole
            genome shotgun sequence.
ACCESSION   DASWGA010000999 DASWGA010000000
VERSION     DASWGA010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4874
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357589"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1976
                     /locus_tag="VF991_22855"
     CDS             <1..1976
                     /locus_tag="VF991_22855"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX9559351.1"
                     /translation="QETGGKPIVAAINGTALGGGFEICLACHYRIAAANPRAKVGQPE
                     VKIGLLPGGGGTQRIPRLIGVMNAAPILLEGKDLTVDAAKGLGLIHEVVPANELLAKA
                     KAWLMAPATGQVVPEYAGKGAKPIDGRAVQPWDRKGFKTPGFPGGQVWSPPGVQTFIG
                     GNAMIAAKTNGVYPAPKAIMSCVYEGLQLPIDAALRVETRYFVSLLRDPVAKSMIRTL
                     FFGLQEANKLARRPKGVPKQEYKKIGVLGAGLMGSGIATVASQAGLEIVLIDKDQASA
                     DKGKAHIAAELDKLVKRGRLTQDKRDETLARVAATPDFGALKGCQLVVEAVFENREVK
                     AEATKKAEAVLAADAVFASNTSTLPITGLAEASARPQNFIGLHFFSPVEKMPLVEIIV
                     GKKTSPETLARAMDFVQKIRKTPIVVNDSRGFFTSRVCGAFISEGHRMLKEGVPAAMI
                     ENCARFAGMPVGPLALNDEVAIDLSWKIMDQARRDAEAAGHKFEGGGTEDILELMVKK
                     LERFGRKNGKGFYEYPADGKKRLWPELQKYFPADPKLLYGEGEDKRAKENEIKKRLLY
                     VQSVDTARCLEANVLTNPQDGDVGSIMGLGFAPQTGGAVSLIDQVGIKTFVAECDELA
                     KKYGPQFEVPKLLRDMAAKGQGFYANYHPAKAA"
     gene            2115..2909
                     /locus_tag="VF991_22860"
     CDS             2115..2909
                     /locus_tag="VF991_22860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559352.1"
                     /translation="MNAKEIGALADRIAEARRGRRVMDFLAAATADLSEADSYKVQFA
                     VHDRLTGSGQDRMAGWKVAFTLPVQYKPLKLSGPVFAGIYQSGVRTSGAVFAKGWPIK
                     SGIEPELVARMASDVTAGSGPYTADTIRPFVANLYCGMELVENRYPDVTKVSGPGRIA
                     DDVLQAACVLGTEIKDWQKLDFANLKGRSTLDGKELAAGPGSAVMGGAMISLAWLANK
                     LIEHGKYLQAGDLILTGSVHPPAFLPGPGVAKTEFVGLGGSEITIN"
     gene            3432..3887
                     /locus_tag="VF991_22865"
     CDS             3432..3887
                     /locus_tag="VF991_22865"
                     /inference="COORDINATES: protein motif:HMM:NF018184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HEX9559353.1"
                     /translation="MSCRIVTVERQLTAVIKAKVPFAEIPDAQRSARAAVNAALSSLD
                     AESTGRPCTRFRTPANGALEMEIGTIVSRPFTAKGEVVPSDLPAGRAAHFLLKGPFDG
                     MPGAWQTLFNRCKAEQLELAGINWEIYMPWQGVDPAKLETDLYALLAQN"
     gene            complement(3935..>4874)
                     /locus_tag="VF991_22870"
     CDS             complement(3935..>4874)
                     /locus_tag="VF991_22870"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEX9559354.1"
                     /translation="RKTPMGNVSHLVTRTAALQSSVENGLAEGLPAKDRQFVTALARG
                     LDILRAFHAGEGMLGNQEIAHRTGLPKPTVARLTHTLTELGYLNYIRRFRKYELGASV
                     LALGYAAISSMDVRRASRQPLEQLAHALNASTALGGRDRHSMIYLEACRGPSVVAITH
                     DVGTRVPMASTAIGRAYLFSLPDVDRNKQIDAIRRRWRDDWTKVKTGLERSFKELTDR
                     GFCVTWGEWLPELCGVGAPLRNSDGTAAYAINASAPIYQISRDRLEADWGPRLVKVAR
                     DIRTGMAAQPSTAPTATAMRPATNGQRPPMSAMARR"
BASE COUNT          859 a         1596 c         1665 g          754 t
ORIGIN      
        1 accaggagac cggcggcaag ccgatcgtgg cggcgatcaa cggcaccgcc ctgggcggcg
       61 gcttcgagat ctgtctcgcc tgccactatc gcatcgccgc tgccaacccg cgcgccaagg
      121 tcggccagcc cgaggtcaag atcggcctgc tgccgggcgg cggcggcacg cagcgcatcc
      181 cgcgcctgat cggcgtgatg aacgccgcac ccatcctgct cgaaggcaag gacctcacgg
      241 tcgatgccgc caagggcctc ggcctgatcc acgaggtcgt gccggccaac gagcttctgg
      301 ccaaggccaa ggcctggctg atggcgccgg ccaccggaca ggtcgtgccg gaatatgccg
      361 gcaaaggcgc caagccgatc gacggccgcg ccgtgcaacc ctgggaccgc aaggggttca
      421 agactcccgg ctttcccggt ggccaggtgt ggagcccgcc gggcgtgcag accttcatcg
      481 gcggcaacgc catgatcgcg gccaagacca acggcgtcta tcccgcgccc aaggcgatca
      541 tgagctgcgt ctacgagggc ctgcagctgc cgatcgatgc ggcgctgcgc gtcgagaccc
      601 gctacttcgt ctcgctgctg cgcgatcccg tggccaaaag catgatccgc acgctgttct
      661 tcggcttgca ggaggccaac aagctcgccc gccgacccaa gggcgtgccc aagcaggagt
      721 acaagaagat cggcgttttg ggcgccggcc tgatgggctc gggcatcgcc acggtggcct
      781 cgcaggctgg cctcgagatc gtgctgatcg acaaggacca ggcgtcggcc gacaagggca
      841 aggcgcatat cgcggctgag ctcgacaagc tggtgaagcg tggccggctc acccaggaca
      901 agcgcgacga gaccttggcg cgcgtcgccg ccacgccgga tttcggcgcg ctgaagggct
      961 gccagctcgt ggtcgaggcg gtgttcgaga atcgcgaggt caaggccgag gcgaccaaga
     1021 aggccgaggc ggtgctcgcc gccgacgcgg tgttcgcctc caacacttcg accttgccga
     1081 tcaccggtct cgccgaagct tcggcacggc cgcagaactt catcgggctc catttcttct
     1141 cgccggtcga gaagatgccg ctggtcgaga tcatcgtcgg caagaagacc tcgccggaga
     1201 cgctggcgcg cgccatggac ttcgtccaga agatccgcaa gacgccgatc gtggtcaacg
     1261 acagccgcgg cttcttcacc tctcgcgtgt gcggcgcctt catcagcgaa ggccatcgca
     1321 tgctgaagga gggcgtgccg gccgccatga tcgagaactg cgcccgcttc gccggcatgc
     1381 cggtgggccc gctggcgctc aacgacgagg tggcgatcga cctgtcgtgg aagatcatgg
     1441 accaggcgcg gcgcgacgcc gaagcggccg gccacaagtt cgagggcggc ggtaccgagg
     1501 acatcctcga gctgatggtg aagaagctcg agcgcttcgg ccgcaagaac ggcaagggct
     1561 tttatgaata tccggccgac ggcaagaagc gcctgtggcc cgagctgcag aaatactttc
     1621 cggccgatcc caagctgctt tacggcgagg gcgaggacaa gcgcgccaag gagaacgaga
     1681 tcaagaagcg cctgctctac gtccagtcgg tcgacaccgc gcgctgcctg gaggccaacg
     1741 tgctcaccaa cccgcaggac ggcgacgtcg gctcgatcat gggcctgggc ttcgcgcccc
     1801 agaccggcgg cgccgtcagc ctcatagacc aggtcggcat caagacgttc gtcgccgagt
     1861 gcgacgagct cgccaagaag tacggacctc agttcgaggt gccgaagctc ctgcgcgaca
     1921 tggccgccaa gggccagggc ttttacgcca actatcatcc ggccaaggcg gcgtaaaaaa
     1981 ccaccgtcat cccgaccgga gcgaagcgga gtggaggggc ctaatcttgt cgtcaccgag
     2041 cgcatgagga ggtccctccg cttcgcctcg cgacgctcgg cttcggtcgg gatgacggaa
     2101 gtagggagac aaaaatgaac gccaaggaaa tcggggctct cgccgatcgc atcgccgagg
     2161 cccggcgcgg ccgcagggtg atggactttc tcgccgccgc aacggccgat ctctccgagg
     2221 ccgactccta caaggtgcag ttcgccgtgc acgaccggct caccggcagc ggccaggacc
     2281 gcatggccgg ctggaaggtg gcgttcacgc tcccggtgca gtacaagccg ctcaagctgt
     2341 cgggcccagt cttcgccggc atctaccaga gcggcgtgcg cacgagcggc gcggtgttcg
     2401 cgaagggttg gccgatcaag tcgggcatcg agcccgagct ggtggcgcgc atggccagcg
     2461 acgtgacggc cggtagcggc ccgtatacgg ccgatacgat caggcccttc gtcgccaatc
     2521 tctattgcgg catggaactg gtcgagaacc gctatcccga cgtcaccaag gtgagcggcc
     2581 ccggccgcat cgccgacgac gtgctgcagg ctgcctgcgt gctcggcacc gagatcaagg
     2641 actggcagaa gctcgacttc gccaacctga aaggccgctc gactctggac ggcaaggaac
     2701 tcgccgcggg gccgggcagc gccgtcatgg gtggcgccat gatctcgctc gcctggctcg
     2761 ccaacaagct gatcgagcac ggcaagtacc tgcaggccgg cgacctcatc ctgaccggct
     2821 cggtccatcc gccggcgttc ctgccgggac cgggtgtggc gaagacggag ttcgtcggcc
     2881 tgggcgggtc ggagatcacg atcaattagc ttttcgcttt ctcaacaaaa cgcttggcgt
     2941 ggtgatgaga agcgccagga tgaacgccgt gaacaggagg tgtcgaaggt cgctccatag
     3001 ggttctgcag cgaccccggc ccgccatcga tccgcgaggc caagacccgc agtcctggcc
     3061 ccgcgagcac cgacttcact gggggaatct cgggcgaggc atcctcggca tgccaaagaa
     3121 ggcgttcttc cacggcccgt ccggggcgct ccagccggcg acgtaggcgg cgacagtcgc
     3181 gccaatctgg ctcgcacccc catcgccggg cgacttgacc tggccagggc caagtatcgc
     3241 aaggatcatg gctgctacgg aaaacatcgc ttgcatggct ctctcccttt cagctgagac
     3301 cggcatgagc gccgttctcg ctggggagac ggaagccgac gacgaggcgt tacacgcaaa
     3361 acgacatttg acagaattcg gcggctctcc tatcacttaa ccataaggtt aagtgatagg
     3421 aggctggatc gatgagctgc aggatcgtga cggtggagcg tcagctcacc gccgtcatca
     3481 aggccaaggt gccgttcgcc gaaattcccg acgcccagcg ctcggcgcgc gcagccgtga
     3541 atgccgcctt gtcatcgctc gatgccgagt cgacaggccg gccctgtacg cgcttccgga
     3601 cgccggcgaa cggcgcgctc gagatggaaa taggcacgat cgtgtcgcgg cccttcacag
     3661 ccaaaggcga ggtcgtgccg tccgatctgc cggcgggccg cgccgcccat ttcctgctga
     3721 aagggccgtt cgatggcatg ccgggcgcct ggcagacgct gttcaaccgt tgcaaggcgg
     3781 agcagctcga actcgccggc atcaattggg agatttacat gccctggcag ggcgtcgatc
     3841 ccgccaagct cgagaccgat ctctacgcgc tgctggccca aaactgaacc gcgggcaacg
     3901 ggcccgcggt ccgatcgtcc gaagtctgtt cgttctagcg gcgcgccatc gccgacatcg
     3961 gcggccgctg gccgttggtg gcgggccgca tcgccgttgc cgttggcgcc gtggacggct
     4021 gggcagccat gccggtgcgg atgtcgcgcg ccaccttgac caggcgcgga ccccaatcgg
     4081 cctcgagccg gtcgcggctg atctggtaga tcggcgccga ggcgttgatg gcgtaggcgg
     4141 cggtgccgtc ggaattgcgc agcggcgcgc cgacgccaca cagctcgggc agccattcgc
     4201 cccaggtgac gcagaagccg cggtcggtca gctccttgaa cgagcgctcg agcccggtct
     4261 tcaccttggt ccagtcgtcg cgccagcggc ggcggatggc gtcgatctgc ttgttgcggt
     4321 cgacgtcggg cagcgagaag aggtaagcgc ggccgatcgc ggtgctggcc atcggcacgc
     4381 gcgtgccgac atcgtgggtg atcgccacga ccgaggggcc gcggcaggcc tcgagataga
     4441 tcatcgaatg gcggtcgcgg ccgcccagcg ccgtcgaggc attgagcgca tgcgcgagct
     4501 gttcgagcgg ctggcgcgag gcgcggcgca catccatgct cgagatcgcc gcatagccca
     4561 gcgccagcac cgaggcgccc agctcgtact tgcggaagcg acgaatgtag ttgaggtagc
     4621 cgagctcggt cagcgtatgg gtgaggcggg ccacggtcgg cttgggcagg ccggtgcggt
     4681 gggcgatctc ctggttgccc agcatgcctt cgccggcatg gaaggcgcgc aggatatcga
     4741 ggccgcgggc gagcgccgtg acgaactggc ggtccttggc gggcaggccc tccgcaagtc
     4801 cgttctcgac ggagctctgc agggcggcgg tgcgggtgac gaggtggcta acgttgccca
     4861 tgggcgtttt tctc
//
LOCUS       DASWGA010001000         7075 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2258985, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001000 DASWGA010000000
VERSION     DASWGA010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7075
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2258985"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..595
                     /locus_tag="VF991_22875"
     CDS             <1..595
                     /locus_tag="VF991_22875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RES family NAD+ phosphorylase"
                     /protein_id="HEX9559355.1"
                     /translation="ECQHLHYLLSTPFRYGAAYPIGSRFRRAGLTDGVFYAGESPEIA
                     VAEMAFYRLLFYGESPGTPWPANPAEYTAFSAEYATRKAIDLSKGRYVRDKAAWMHLT
                     DYAPCQAFADIARAAKIEVIRYRSVRDPQQGMNLALHTCRTFAKPKPTGQQTWHIRLS
                     AAGAHAVCESPNSRMTYRREAFAADPRIARLRWDRDR"
     gene            complement(606..1754)
                     /locus_tag="VF991_22880"
     CDS             complement(606..1754)
                     /locus_tag="VF991_22880"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9559356.1"
                     /translation="MQHKLISGDNHIDLTYCPADLWSSQAPIKWKKAAPRVEERNDGQ
                     HWFVDDKDRGMWNGVGPGFLPYTKGAFDHIDEMKDDGFEWDSFPGARPRPTTPELRLA
                     DLDRDGLEKEIIYGCLMVNDLIEDADLRVWVDARYNDWAADFAKRSDPNRVFPLAIIP
                     NTDPAAAAAEVRRCARMGLKGGDLAFKRMSLPLYHHAWYALWEAAAECRFPISFHSTG
                     FKALRAPDTPEMEKEYSTQFRLVRSALFQLDTMEVLVSLLASGACEKYPDFNFVLGES
                     GVTWLPYVFDRLDTEYHDRARSLGFKLKPSDYFRRQGFVTYQQDKYLEPIVPLIGEDN
                     IIWGADYPHPDCIWPKSRETLSRNLAGFPDGVQKKIVHDNVARLYGLN"
     gene            complement(1866..2495)
                     /locus_tag="VF991_22885"
     CDS             complement(1866..2495)
                     /locus_tag="VF991_22885"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX9559357.1"
                     /translation="MPELFEIIETCRAMRRLKPDPVPDELISKILKAGICAPNGGNTQ
                     RWRFLVIKDRKIKQAVQVLYKRAFDEVIGPRYLTSEPPPGVTKERYLRQHAAVAYLTD
                     HFHEAPVWIVACLEDGPNPNRAAGSSIYPAVQNMVLAARALGLGTTLTTRHLLFEKEA
                     EAALGLPSGVHSYAILPIGYPMGKFGPVGRGPLNEIVYQDRWGEPYRGV"
     gene            complement(2549..2803)
                     /locus_tag="VF991_22890"
     CDS             complement(2549..2803)
                     /locus_tag="VF991_22890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559358.1"
                     /translation="MAREQRRLAAIVSADVAGYSRLMGQDESGTLAALTSVPLEAGRQ
                     LAAGIPGARFVSFASESHIFMHGEPSAECFFEEIRLFLAK"
     gene            complement(2885..3622)
                     /locus_tag="VF991_22895"
     CDS             complement(2885..3622)
                     /locus_tag="VF991_22895"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX9559359.1"
                     /translation="MFQGTVDAVHFTEDQPHDVDIAAQAMPFLKSLSDSRLKARARES
                     ERAFRELIAPIAGATFTGGEDVTREQLVTMGRFSSLVLIGRPGADAENISPATVKAAL
                     YDCARPVMIAPPDLPKGPISSVIVAWNGSVQAARAVGAALPLLAKARTVTLLVAGGKP
                     DDLGTPLLLRNLGRRGIAATVETMDSGAVSGRARGRALLAYAKEKGADLLVMGAYGHG
                     GLTNFLGLGGATAKVIAACPVPLLLAH"
     gene            complement(3787..4839)
                     /locus_tag="VF991_22900"
     CDS             complement(3787..4839)
                     /locus_tag="VF991_22900"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEX9559360.1"
                     /translation="MGQVLVIAAVTLALDFVLTATLLDNLKRAFAEAAAENHLVYQPA
                     PHHHDLVPDVKTTRLWGNMFYPWQTDRYGFRTGTCGPGEAEKAWPAIFVVGDSFTEAL
                     GSSYEQSFVGLMACDAARQKKAVWNLGVASYSPIIYHRKIRAAAQRLGVKPAEIFVFL
                     DLSDIDDEANVYRVAEDGTVKYATTSEPTNQLPFDLVQFLINNLTTARLLHDLYLTSM
                     FSYSLSIGRPRARWTVDNALLESWGKRGLELASANLDKVVGLCREWQCRLTLIVYPWP
                     DNIVEHDKDSIQVRYWRAWAAERGVRFIDGFAPFFREPADEALRRYYFAGDVHFTEQG
                     NRLLYQAVKDAVGGDW"
     gene            5000..5950
                     /locus_tag="VF991_22905"
     CDS             5000..5950
                     /locus_tag="VF991_22905"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HEX9559361.1"
                     /translation="MAHAISTSSFRSDHMSPSALALAVLLHALVALALWSIALNPRQP
                     PAEEPIDVTFEQPKPEPPPPPPPQPKVQPPLPASALEFGLRPPAPITSDKPTQVPPAG
                     ERPKEPPAPPPPPLRDVLPQPEPQAAPPTPAELAKPTPPLPVPQEHAPGPQQALVAPP
                     QHPPLPTQPAHPQPQARPQLEPPELRPSPLTTAPPHRPPGGKPAEDASPSPFVNPADT
                     YNRARVADNYLWQVVSKLIGYRYEAHVSARQGLTVVRVVIARDGRLLDVQVARSSGYP
                     EFDRGVVAGVHAGSPYTPLPPEIHGDSATFDLPLVSVNRQ"
     gene            complement(6052..>7075)
                     /locus_tag="VF991_22910"
     CDS             complement(6052..>7075)
                     /locus_tag="VF991_22910"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9559362.1"
                     /translation="NIGGRRGMKLGLYMATQWRQGADLGPELANLIAQVRAARASGLA
                     SLMVGQHFVSSPLQMFQAMPLLARLAAEAEGMKLGPGLLLLPLLNPVIVAEETATLDW
                     LTGGNAIIGLGLGYRQEEFLSIGVPIKERVPRFVEGVEVIRKLWRDDVVEHKGRFHTL
                     SKVQASIKPKQPGGPPIWMAGDSEAPVKRAAKLADAWMPSPMVSEGGVGKLNALFRET
                     RAAAGLAPAAEYPIIRECHVGSGTGKALDEVREPLSFKYEAYASWGGASGFVPADRIR
                     GDFDKFAANRFIIGSENEVVDQIGRYGERTGTDHILLRVQWPGLGQKTVLGTLERLGR
                     VVEKLK"
BASE COUNT         1210 a         2417 c         2278 g         1170 t
ORIGIN      
        1 cgagtgccag catctgcact atctcctgtc gacgcccttt cgctacggcg cggcttatcc
       61 catcggctct cgcttccggc gggcaggcct gacggacggc gtcttctacg ccggcgaatc
      121 gccggagatc gccgtcgccg aaatggcgtt ctatcgcctg ctcttctatg gcgagtcgcc
      181 gggcacgccg tggcctgcga atcccgccga atacacggcg ttttccgcgg agtatgcgac
      241 cagaaaggcg atcgacctta gcaagggcag gtacgtcagg gacaaagcgg cctggatgca
      301 cctgaccgac tatgcgcctt gccaggcgtt tgccgatatc gcgcgagccg caaagatcga
      361 ggtcatccgc tacaggtcgg ttcgcgaccc gcagcaagga atgaaccttg cgctgcacac
      421 ttgccgaacc ttcgccaagc ccaagccgac agggcagcag acctggcata ttcgtctcag
      481 tgccgccggg gcccatgcgg tctgcgaatc gccgaactcc cgcatgacct atcgccgcga
      541 ggcttttgcc gcagatccgc gcattgccag gctacggtgg gacagggatc gctagatcgt
      601 acggatcagt tcagcccgta gagccgcgcg acgttgtcgt gaacgatctt cttttgcacg
      661 ccgtccggga aaccggcgag gttgcggctc aaggtctcgc gcgacttcgg ccagatgcag
      721 tcggggtgcg gataatcggc gccccagatg atgttgtcct cgccgatcag cggcacgatc
      781 ggttccaggt acttgtcctg ctggtaggtg acgaagccct ggcgccggaa atagtcgctg
      841 ggcttcagct tgaagccgag gctgcgggcg cggtcgtgat attcggtgtc gagacggtcg
      901 aacacgtaag gcagccaggt cacgcccgat tcgcccagga cgaaattgaa gtcggggtac
      961 ttctcgcagg cgcccgaggc caacagcgag accagcactt ccatcgtgtc gagctggaac
     1021 agcgcggagc gcaccagccg gaactgggtc gaatattcct tctccatctc gggcgtgtcg
     1081 ggcgcgcgca acgccttgaa gccggtcgaa tggaaggaga tcgggaacct gcactccgcc
     1141 gccgcctccc acagcgcgta ccaggcatga tggtaaagcg gcaggctcat gcgcttgaag
     1201 gcaaggtcgc cgcccttcag ccccatgcga gcgcaacgcc gcacctcggc cgcggcggcg
     1261 gccgggtcgg tattgggaat gatggccagc ggaaacacgc gattgggatc ggagcgcttg
     1321 gcgaagtcgg cggcccagtc gttgtagcgc gcatcgaccc agacgcgcag gtcggcgtcc
     1381 tcgatcaggt cgttgaccat caggcagccg tagatgatct ccttttcaag tccatcgcgg
     1441 tcgagatcgg ccaggcgcag ctccggcgtg gtcggccgag gcctggcgcc ggggaagctg
     1501 tcccattcga agccgtcgtc cttcatctcg tcgatatggt cgaacgcgcc cttggtgtag
     1561 ggcaggaagc ccggaccgac gccgttccac atgccgcggt ccttgtcgtc gacgaaccag
     1621 tgctgcccgt cgttgcgctc ctcgacgcgc ggcgcggcct tcttccattt gatgggcgcc
     1681 tgcgacgacc acagatcggc ggggcaatag gtgagatcga tgtgattgtc gccggaaatg
     1741 agcttgtgtt gcatggcgcg ttcctagtcg gcgagacagt tcagggcagg gcgctggcgc
     1801 ccccatcgta cgggcggccc atggcacgcg ccatggcgtt tttccgccca gcggggcgtc
     1861 gcgctctaga cgccgcgata gggctcgccc cagcgatcct ggtagacgat ctcgttgagc
     1921 gggccgcggc cgaccggtcc gaacttgccc atcgggtagc cgatcgggag gatggcgtag
     1981 gagtgcacgc cgctcggcag gcccagcgcg gcctcggctt ccttttcgaa gagcagatgc
     2041 cgggtcgtca gcgtggtgcc gaggccgagc gcgcgtgccg ccagcaccat gttctgaacc
     2101 gccgggtaga tggacgagcc ggccgcccgg ttgggattgg ggccatcctc caggcaggcg
     2161 acgatccaca ccggcgcctc gtggaagtgg tcggtcaaat aggccaccgc ggcgtgctgg
     2221 cggaggtagc gttccttggt cacgccgggc ggcggctcgc tggtgaggta gcgcgggccg
     2281 atcacctcgt cgaaggcgcg cttgtacaaa acctgcaccg cttgcttgat cttcctgtcc
     2341 ttgatcacca ggaaacgcca gcgctgggta ttgccgccgt tcggcgcgca gatgccggct
     2401 ttcaggatct tggagatcaa ttcatcgggc accgggtcgg gcttcagacg ccgcatcgca
     2461 cggcacgtct cgatgatctc gaacagctcg ggcattgcat cctccctcta acttcagttt
     2521 cgccacgcca ttgcaggcgc aggccgcgct acttggcaag aaacaggcga atctcctcga
     2581 agaagcactc cgcggagggc tcgccgtgca tgaagatgtg actctcgctc gcaaacgata
     2641 cgaatcgcgc gccggggatg ccggccgcca actgacgtcc ggcttcgagc gggacactcg
     2701 tcagcgcagc cagcgtgccg ctctcgtcct gccccatcag ccgggaatag ccggcgacgt
     2761 cggcggatac gattgccgcg aggcggcgct gctccctggc caagctctct cctcccgacg
     2821 tcacgacagg cgttgcacgc tacagccggc cccgggcgcg tgacaacggc tcatccatcc
     2881 gagctcagtg cgccagcaag agcggtaccg ggcaggcggc gatcaccttc gcggtggcgc
     2941 cgcccagccc caggaagttc gtcagcccgc catgtccgta ggcgcccatc accagaaggt
     3001 cggcgccttt ttccttggca taggcgagca aagctcggcc gcgggcgcgg cctgagacgg
     3061 cgccagaatc catcgtttcc accgtcgcgg cgatgccgcg gcggccgaga ttgcgcaaca
     3121 gcaaaggggt ccccaaatcg tcgggtttgc cgccggcgac aaggagcgtc accgtgcgcg
     3181 ctttggcgag aagcggcagc gccgcgccaa cggcacgcgc cgcctggacg ctgccattcc
     3241 aggcaacgat gaccgacgag atcggccctt tcggcaaatc gggcggtgcg atcatgaccg
     3301 gacgcgcaca gtcatacagg gcagccttca cggtggccgg cgagatgttt tccgcatcgg
     3361 cgccgggcct gccgatcagc accaggctgg agaaccggcc catcgtcacg agctgctctc
     3421 gcgtcacatc ctcgccgccg gtgaaagtgg cgcctgcgat cggcgcgatc agttcacgaa
     3481 aggcgcgctc ggactcccgg gcgcgggcct tcagcctgct gtcggacaag gatttgagga
     3541 agggcatggc ctgggcagcg atatcgacgt cgtgcggttg gtcctcggtg aaatgaactg
     3601 catcgacggt gccctggaac atcgcggcga tcctggcggc gagaccgaac gacatcgccg
     3661 cgtccgggcc gccctcggaa attgcaagaa tagacttgta catcgactcg aatcccccgc
     3721 tccggccgtc cagccgacct ggcgcgctgc cagcaatatc ccatgccgcg cacgtgcgga
     3781 atggcgttac cagtcgccgc caaccgcgtc cttcacggct tggtagagca ggcggttgcc
     3841 ttgctcggtg aagtgtacgt cacccgcgaa gtaatagcgg cgcaatgcct cgtcggcggg
     3901 ttcgcggaag aagggcgcga agccatcaat gaagcgcacg ccgcgctccg ccgcccaggc
     3961 gcgccagtaa cgaacctgga tgctgtcctt atcgtgctcg acgatgttgt ccggccaggg
     4021 gtagacgatc aacgtaagac ggcactgcca ctcccggcaa agccccacga ccttatcgag
     4081 attggcgctg gccagctcga ggccacgctt gccccagctc tccaggagcg cgttgtcgac
     4141 cgtccaccgc gcccgcgggc ggccgatcga cagcgaatag ctgaacatcg aggtgagata
     4201 gaggtcgtgc agcaggcgag ccgtcgtgag gttgttgatc aggaactgga cgagatcgaa
     4261 cggcagctgg ttcgtgggct cgctcgtggt ggcgtacttc acggtgccgt cttcggcgac
     4321 gcgatagacg ttggcctcgt cgtcgatgtc cgacagatcg aggaagacga agatctcggc
     4381 gggcttcacc cccagtcgct gggcggcggc gcggatcttg cgatgataga tgatcggact
     4441 gtaggaggcg acgccgaggt tccacaccgc cttcttttgc cgggccgcgt cgcaggccat
     4501 caggccgacg aaactctgct catagctcga gcccagcgcc tcggtgaacg agtcgccgac
     4561 gacgaaaatg gccggccacg ccttctccgc ctcgccgggc ccgcaggtgc cggtgcgaaa
     4621 gccatagcgg tcggtctgcc acggatagaa catgttgccc cacagccgcg tggtcttcac
     4681 gtcgggaacg aggtcgtggt gatgcggggc cggctggtaa accaggtggt tttccgccgc
     4741 ggcctccgcg aacgcccgct tcaggttgtc aagcagcgtc gccgtaagaa cgaaatccag
     4801 ggccaatgtt acggcggcaa tgaccaagac ctggcccaca aaccgcaaaa ttcttctcat
     4861 cgcgcgctct gtctccccct gcgccatgat cgccaaaacg ccttcggtac gtcaacaaaa
     4921 ctgcagtgca aagcttcgca gcgggtgcgc aagggacggg ctggcggggc ggcgcgcggc
     4981 atcctacaag aaagacgttg tggcccacgc catcagcacc tcttcttttc gttccgacca
     5041 catgtcgcct tcggcgctgg cgttggcggt gctgctgcat gccctggttg cgctcgcgct
     5101 ttggtcgata gcgctcaatc cgcgccaacc gccggcggaa gaaccgatcg acgtcacctt
     5161 cgagcagccc aaaccggagc caccgccgcc gcctccaccc cagccgaagg tgcagccgcc
     5221 cctgccggcc tcggcactcg agttcggcct gcgcccgccc gctcctatca cctcggacaa
     5281 gccgacacag gtgccgccgg cgggcgagcg gcccaaggag cctccggcgc ccccgccacc
     5341 acccttgcgg gacgtcctgc cgcagcccga gccgcaggcg gcgccaccga cgcctgcgga
     5401 actcgccaag cccacgccac ccttgccggt accgcaggag catgcgccgg gaccgcagca
     5461 ggctctggta gcgccgccgc agcacccgcc gctgccaacc cagccggcgc acccccagcc
     5521 gcaagcgcga ccgcaactgg aaccgccgga gctgcggcca tcgccgctca ccaccgcccc
     5581 accgcaccgt ccgccgggcg gcaagcccgc agaggatgct tcgccctcgc ccttcgtgaa
     5641 cccggcggac acctacaacc gcgcccgggt cgccgacaat tatctctggc aggtcgtcag
     5701 caagctgatc ggctaccgtt acgaggcgca cgtgagtgca cgccaaggtc tcaccgtggt
     5761 gcgcgtcgtc attgcccgcg acggccggct gctcgatgtc caggtcgccc gctcgagcgg
     5821 ctacccggag ttcgaccgag gcgtcgtcgc cggcgtccac gccggctcgc cctacacccc
     5881 gctgccgccc gagatccatg gcgacagcgc caccttcgac ctgccgctgg tatcggtgaa
     5941 tcggcagtaa tgatgctctt gccggagcgc gggcctccag gcccgctcat gattcattaa
     6001 tgcgggcctg gaggccctca ggcgcatgtg aatgcgccga gtccggcaag actacttcag
     6061 cttttcgaca acccggccca gccgttccag ggtgcccaaa accgtcttct ggcccagccc
     6121 gggccattgc acgcgcagca ggatgtggtc ggtgccggtg cgttcgccgt agcggccgat
     6181 ctggtcgacc acctcgttct ccgagccgat gatgaagcgg ttggcggcga acttgtcgaa
     6241 gtcgccgcgg atgcggtcgg ccggcacgaa gcccgaagcg ccgccccagc tcgcataagc
     6301 ttcgtacttg aaggacagcg gttcgcgcac ctcgtcgagc gccttgcccg tgccgctgcc
     6361 gacatggcac tcgcggatga tcggatactc ggcggccggc gccagcccgg cggccgcacg
     6421 ggtctcgcgg aacagcgcat tcaacttgcc cacgccgccc tcgctcacca tcggcgaggg
     6481 catccaagcg tcggcgagct tggccgcgcg cttgaccggc gcctccgaat cgcccgccat
     6541 ccagatcggc ggaccgccgg gctgcttggg ctttatgctg gcctgcacct tgctgagcgt
     6601 atggaagcgg cccttgtgct cgacgacatc gtcgcgccac agcttgcgga tcacctcgac
     6661 gccctcgacg aagcgcggca cgcgctcctt gatgggcacg ccgatggata aaaactcctc
     6721 ctggcgatag cccaggccca ggccgatgat ggcgttgcca cccgtcagcc agtcgagcgt
     6781 cgcggtttcc tcggcgacga tcaccggatt gagcagcggc aggagcagca gccccggtcc
     6841 cagcttcatg ccctcggcct cggccgcgag ccgcgccagc aacggcatgg cctggaacat
     6901 ctgcaacggg ctcgacacga aatgctggcc gaccatcagc gaggcaaggc cgctggcgcg
     6961 cgccgcccgc acctgcgcga tcaggttggc aagctcgggc ccgaggtcgg cgccctgccg
     7021 ccattgcgtc gccatgtaga ggccgagctt catgcctctc ctcccgccga tgttg
//
LOCUS       DASWGA010001001         2420 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_239257, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001001 DASWGA010000000
VERSION     DASWGA010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239257"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="VF991_22915"
     CDS             complement(<1..218)
                     /locus_tag="VF991_22915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEX9559363.1"
                     /translation="MAHLPILTAPEPRLKKKSKPVDTVDAEVRQLMDDMLETMYAAPG
                     IGLAAPQVGALKRVIVLDIDREDVKTGPL"
     gene            complement(260..1174)
                     /gene="argB"
                     /locus_tag="VF991_22920"
     CDS             complement(260..1174)
                     /gene="argB"
                     /locus_tag="VF991_22920"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043878847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEX9559364.1"
                     /translation="MAEPVQTDKEQRRLIRMAETISKALPYMRRHNDATFVVKYGGHA
                     MTDPKLGDLVARDIVLMKQVGMNPIVVHGGGPQISKMLERVGIASNFVNGLRVTDAAT
                     MEIVEMVLAGSINKAIVADINECGGIAVGICGKDGNLILARKVTEMRDPQTGELLKVD
                     LKQVGEPAKINVMVLEQLRRADVIPVVAPIGFGVDDELTYNINADTSAGAIAGAMRAK
                     RLLFLTDVPGVLDKNGQLIQDITVEEARALIADGTISGGMIPKVENCIDAVNSGVEAA
                     VIMDGRVPHALLLEVFTEAGVGTMVTRS"
     gene            1292..1963
                     /locus_tag="VF991_22925"
     CDS             1292..1963
                     /locus_tag="VF991_22925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006201482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX9559365.1"
                     /translation="MIDIDSLADRGFTVVPGLIGPEQCRMLANLWPDKARFRSHVIMQ
                     RHGYGQGEYQYFTYPLPEPVEKLRQALYPELAQVANRWNEQLGSTKRFPVTLQAWLRQ
                     CHQGGQQRPTPLLLHYGPGDYNCLHRDLYGELVFPLQVTVLLSDPRRDFSGGEFMLVE
                     QRPRMQSRGEVVPLAQGDAVIFAVNQRPVKGTRGFHRTAMRHGVSSLRDGERFTLGII
                     FHDAA"
     gene            2062..>2420
                     /locus_tag="VF991_22930"
     CDS             2062..>2420
                     /locus_tag="VF991_22930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559366.1"
                     /translation="MGPAIAWSAPVPDCGDVARLEDGWTVAAPQEQALDPQLICAIGP
                     RLAGLKEANAHGVVIARHGAIVYEAYLPGEDQHWPQKHWKEPLAMANHDVRTNMTCNR
                     SARALLRCWSVQRATAA"
BASE COUNT          402 a          780 c          806 g          432 t
ORIGIN      
        1 agcgggccgg tcttgacgtc ctcgcggtcg atatcgagca cgatcacgcg cttcagggcg
       61 ccgacctgcg gcgccgccag gccgatgccg ggcgcggcgt acatcgtctc cagcatgtcg
      121 tccatgagct ggcgtacctc ggcgtcgacc gtgtcgaccg gcttggactt cttcttgagg
      181 cgcggttccg gcgccgtgag gatgggcaaa tgggccatgg tgcctaaata tgcagcgaaa
      241 tcagcggttt caagcccgtt caggagcggg tgaccatggt gccgacgccg gcctcggtga
      301 agacttcgag cagcagggcg tggggcaccc ggccgtccat gatcacggcg gcctcgacgc
      361 cgctgttcac cgcgtcgatg cagttctcga ccttggggat catgccgccg gaaatggtgc
      421 cgtcggcgat cagggcgcgc gcctcttcga ccgtgatgtc ctggatgagc tggccgttct
      481 tgtccaagac gcccggcacg tcggtcagga acaacagccg cttggcccgc atggcgccgg
      541 cgatcgcccc ggccgaggtg tcggcattga tgttgtaggt gagctcgtca tcgacgccga
      601 agccgatcgg cgccaccacc gggatgacgt cggcgcggcg caattgctcg agcaccatga
      661 cgttgatctt ggccggctcg ccgacctgct tgaggtcgac cttcaggagc tcgccggtct
      721 gggggtcgcg catctccgtg accttgcggg caaggatcag gttgccgtcc ttgccgcaga
      781 tgccgacggc gatgccgccg cattcgttga tgtcggccac gatcgccttg ttgatcgagc
      841 cggccaggac catctcgacg atttccatgg tggcggcgtc ggtcacgcgg agcccattca
      901 cgaagttgct ggcgatgccg acccgctcca gcatcttgct gatctgcggg ccgccgccat
      961 ggaccacgat cgggttcatg ccgacctgtt tcatcagcac gatgtcgcgg gccaccagat
     1021 cgcccagctt ggggtcggtc atggcgtgac cgccatactt cacgacgaag gtggcgtcgt
     1081 tgtgccggcg catgtagggc agcgccttgg aaatggtctc cgccatgcgg ataagccgcc
     1141 tctgctcctt gtcggtctgg accggctcgg ccatttctgc gcttcccacg ttgacaaaag
     1201 ccctctccgc gccgggagag ggctaaggcg gcatcatata tcaggcggcc ggcggataga
     1261 agaagagctg gcggcgcggc aggatgtccc catgatcgat atcgactccc tggccgaccg
     1321 cggcttcacc gtggtgccag gcctgatcgg ccccgagcag tgccggatgc tggccaatct
     1381 atggccagac aaggcccgct ttcgcagcca cgtgatcatg cagcgccacg gctatggtca
     1441 gggcgaatac cagtacttca cctacccgct gcccgagccg gtggaaaagc tgcgccaggc
     1501 gctttatccc gagctggccc aagtcgccaa tcgctggaac gaacagctcg gcagcaccaa
     1561 gcgctttccg gtgaccctgc aggcgtggct gcggcaatgc caccagggcg gccagcagcg
     1621 gccgacgccg ctgctgctgc actacggacc gggcgactac aactgcctgc accgcgacct
     1681 ctatggcgag ctggtgttcc cgctgcaggt gaccgtgctt ctaagcgatc cccgacgcga
     1741 cttcagcggc ggcgagttca tgctggtcga gcagcggccg cgcatgcagt cgcgcggcga
     1801 ggtcgtgccg ctggcccaag gcgacgcggt gatcttcgcc gtcaaccagc ggccggtgaa
     1861 gggcacgcgc ggcttccacc gcacggcgat gcgccacggc gtctcgagcc tgcgcgacgg
     1921 cgagcgattc acgctcggca tcatcttcca cgacgcggct taggtctgcc ccttgatggc
     1981 ttcggaaatc ctccgctata ggaattctcc agaggaggac atgccataca gtggagcgga
     2041 ttactggcgc tgggtctcgt cttgggcccg gccatcgcgt ggagcgcacc cgttccggac
     2101 tgtggcgatg tcgccaggct cgaggacgga tggacggtcg ccgcaccgca ggaacaggcc
     2161 ctcgatccgc agctgatttg tgccataggt ccacgactgg ccggactcaa ggaagccaat
     2221 gcacacgggg tggtgatcgc ccggcacggt gcgattgtct atgaggcgta cttgccgggc
     2281 gaggaccagc actggccaca gaagcactgg aaagagccgc tggcgatggc caaccacgat
     2341 gtgcggacga acatgacgtg caatcgatca gcaagagcgt tgttgcgctg ttggtcggtg
     2401 cagcgcgcga ccgcggcctg
//
LOCUS       DASWGA010001002         5390 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1889789, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001002 DASWGA010000000
VERSION     DASWGA010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5390
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1889789"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VF991_22935"
     CDS             <1..267
                     /locus_tag="VF991_22935"
                     /inference="COORDINATES: protein motif:HMM:NF018391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HEX9559367.1"
                     /translation="APSPEQQQMAALARHMPKELREALLKVREQVEKNCEPVGDKFAE
                     EARKIHYGESDKRGIYGETSKEEAEALAEEGIEFGRLPWIPRGN"
     gene            complement(275..1072)
                     /gene="ubiG"
                     /locus_tag="VF991_22940"
     CDS             complement(275..1072)
                     /gene="ubiG"
                     /locus_tag="VF991_22940"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEX9559368.1"
                     /translation="MAEPAHTTVDPAEIERFSRISEEWWDPAGKFAPLHRLNPLRIGY
                     IRDRAANRWQRDPLSGTPLHGLSLLDIGCGGGLLSEPMARLGAAVTGVDAAARNIGVA
                     NLHAEKQGLRIDYRQGTAETLAQAGAQFDIVLALEIVEHVADAPLFLKSCGRLVRPGG
                     LLFLSTLNRTAKAWVLAIAGAEYLLGWLPRGTHDWKKFLKPSEVANGLREGGVEAQEI
                     VGVVYNPLSRAWALSKRDLDVNYMLYGTAQGAKDPSLQRRSDPRDSG"
     gene            1131..2378
                     /locus_tag="VF991_22945"
     CDS             1131..2378
                     /locus_tag="VF991_22945"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEX9559369.1"
                     /translation="MARIVLKFGGTSVGDTERIKNVARKVKAEVDRGNEVAVVVSAMS
                     GATNQLVKWVNEIAPLHDAREYDVVVATGEQVTIGLLAMALQQVGVKARSWMSWQIPI
                     RTDGTHAKARIVDIETAAMACAMEAGEVPIVPGFQGLSPDGRLTTLGRGGSDTTAVAL
                     AAALGAERCDIYTDVDGVYTTDPRIVEKARKIDQVTYEEMLEMASQGSKVLQTRSVEL
                     AMNHHVRVQVLSSFDSAVGSDLPGTMVVDEEEIMAQGLEKSVVSGIAFSKDEAKITVT
                     RVADRPGVAAAIFGPLADANINVDMIVQNVSLDGSSTDITFTVPRADLVRAVERLERA
                     KADLKFAEIKSDTNVAKLSVIGVGMRSHAGVALKMFQTLAAKGINIQVISTSEIKISV
                     LVAAEYTELAVRALHIAYELDAA"
     gene            2661..4865
                     /gene="ptsP"
                     /locus_tag="VF991_22950"
     CDS             2661..4865
                     /gene="ptsP"
                     /locus_tag="VF991_22950"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEX9559370.1"
                     /translation="MARADTVDDPLGEVVRLVANEMVAEVCSIYLLRAGEVLELFATQ
                     GLNPSAVHRTRLRVGEGLVGDIAAHARPLALDDAQSHPQFAYRPETGEEIYHSLAGVP
                     IVRAGRVLGVVVVQNRTRRLYDEEEIETLQTIAMVLAELISAGHFVSPNEMQQVDGLG
                     LLPLRVDGVQLTPGVAIGRAVLHEPRIAIQKVVAEDIGQELKRFEDAAHGVREDVDRM
                     LEAHDMQSGEQREILETFRMFIDDRGWLERVREAVGSGLTAEAGVQRAFDDIRTRLGQ
                     SSDPYIRERLSDLQDLTNRLLLRLSGRIAADPSSLPDDMIVIARDMGPAELLDYDRTR
                     LRGLVLEEGSAMSHVAIVARALDIPVVGRAPDVLARIEAGDSIVVDGDNAQVLVRPAE
                     DILQTVYAAIDARAERRRKYAALRDLPSATRDQARISLHMNAGLLIDMQHLDDSGADG
                     VGLYRTEIPFMVRSEFPDVDAQAWLYGRVLDLADGRPVTFRTLDVGGDKVLPYVGAFG
                     DDNPAMGWRAIRIGLDRPAMLRRQLRALIQAANGRPLSVMFPMIAEVSELLSARQLLD
                     LELERGKRRGQAVPERLRVGVMFEVPALAWQLDSLLPHVDFLSVGTNDLLQFLYAADR
                     GNSRVAGRYDSLSPPLLRLLHFVVEKARPAGVDLAVCGEMAGRPVEALALLAIGVRTL
                     SMSPGAIGPVKAMIRSLDLNEATGFMTAALSQPDRPMRETLRLFAADHAIEI"
     gene            4965..>5390
                     /locus_tag="VF991_22955"
     CDS             4965..>5390
                     /locus_tag="VF991_22955"
                     /inference="COORDINATES: protein motif:HMM:NF024805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9559371.1"
                     /translation="MPDQVDWRALEREASPGRAVGRLLRDQREARGLALPDIEKNLRI
                     RLSHLEAIEEGRFDKLPGAAYIPAFLRAYAAHVGLDPEKVLTAYHLSGPVPIKRPVAL
                     PADFPIVEKRAPIGLAVLTILLVVGAGYAAWHYLPREQSV"
BASE COUNT          891 a         1754 c         1823 g          922 t
ORIGIN      
        1 gccccgtccc ctgaacagca gcagatggca gctcttgcca ggcatatgcc gaaggaattg
       61 cgcgaggctc tgctcaaggt gcgcgagcag gtcgagaaga actgcgagcc tgtcggcgac
      121 aagttcgccg aggaagcgcg caagatccat tatggcgaga gcgacaagcg cggcatctac
      181 ggcgagacca gcaaagagga agccgaggcg ctggccgagg aaggcatcga gttcggccgc
      241 ctgccttgga tcccgagggg aaattagacg gctgtcatcc cgagtcgcgc ggatcagatc
      301 ggcgctgaag cgagggatct ttcgcgccct gcgccgttcc gtaaagcatg tagttcacgt
      361 cgaggtcgcg cttgctgagc gcccaggcgc ggctcagcgg attgtagacc acgcccacga
      421 tctcctgcgc ctcgacgcca ccttcgcgca ggccgttggc gacttccgaa ggtttcagga
      481 acttcttcca gtcgtgtgtg ccgcgcggca gccagcccag caggtattcg gcgccggcga
      541 tggccagcac ccaggccttg gcggtgcgat tgagcgtcga caggaagagc aggccgcctg
      601 gcctcaccag tcggccgcag gatttcagga acagcggggc gtcggccacg tgctcgacga
      661 tctccagtgc cagcacgatg tcgaactggg cgcccgcttg ggccagcgtc tcggccgttc
      721 cctggcggta gtcgatccgc agcccctgct tctcggcatg caggttggcg accccgatgt
      781 tgcgcgccgc cgcatcgacc cccgtgacgg cggcgcccaa ccgggccatc ggctcgctga
      841 gcaggccgcc gccgcacccg atatcgagca gcgacaggcc gtgcagcggg gtgcccgaga
      901 gcggatcgcg ctgccaacgg ttggcggcgc gatcgcggat atagccgatc cgcagcggat
      961 tcagccggtg cagcggcgcg aacttgccgg ctggatccca ccattcctct gatatgcgcg
     1021 aaaagcgctc gatctcggca ggatcgacgg tggtatgcgc tggctcggcc atggctgccc
     1081 ttgaccccga tggtgccccc ggtgtctata ccccgctttc gagcaggtcc atggcgcgca
     1141 tcgttctgaa attcggcggt acttcggtcg gcgacaccga gcgcatcaag aatgtcgcgc
     1201 gcaaggtcaa agccgaggtc gaccgtggca acgaggttgc cgtcgtggtc tcggccatgt
     1261 cgggcgccac caatcagctc gtcaagtggg tcaacgagat cgcgcccttg cacgatgccc
     1321 gcgagtacga cgtcgtggtg gcgaccggcg agcaggtgac gatcgggctt ttggcgatgg
     1381 cgctgcagca ggtgggcgtg aaggcgcgct cctggatgtc gtggcagatc ccgatccgca
     1441 ccgacgggac ccatgccaaa gcgcgcatcg tcgacatcga gactgccgcg atggcctgcg
     1501 cgatggaagc gggcgaggtg ccgatcgtgc cgggtttcca gggcctctcg ccggacggcc
     1561 ggctgacgac gctcggccgc ggcggctcgg acaccacggc ggtggcgctg gcggcggcac
     1621 tcggggccga gcgctgcgat atctacaccg acgtcgacgg cgtctacacg accgatccca
     1681 ggatcgtcga gaaggcgcgc aagatcgacc aggtgacgta cgaggaaatg ctcgagatgg
     1741 cgtcgcaggg ctccaaggtg ttgcagacgc gctcggtcga gctggcgatg aaccatcacg
     1801 tgcgtgtgca ggtgctgtcg tcgttcgact ccgccgtggg cagcgacctg cccggcacga
     1861 tggttgtgga tgaggaagag atcatggccc aggggctgga aaaatccgtc gtgagcggca
     1921 tcgccttctc caaggacgag gccaagatca cggtgacgcg ggtcgccgac cggccgggcg
     1981 tggcggcggc gatcttcggt ccgctggccg acgccaacat caacgtcgac atgatcgtgc
     2041 agaacgtgtc gctcgacggc agctcgaccg acatcacctt caccgtgccg cgcgccgacc
     2101 tggtacgggc ggtcgagcgg ctcgagcggg ccaaggccga cctgaagttc gccgagatca
     2161 agtccgacac caatgtcgcc aagctgtcgg tgatcggcgt cggcatgcgc agtcacgccg
     2221 gcgtggcgct caagatgttc caaaccctgg ccgccaaggg gataaatatc caggtgatct
     2281 ccacctccga gatcaagatc agcgtgctcg tcgccgccga gtacaccgag ctcgccgtcc
     2341 gcgccctgca tatcgcctac gagctcgacg ccgcctgacg caggcgtttc cgtttcgctt
     2401 atgcgaacaa gccggtaggc agttcggcgc gggtcttgct ataagcacgc catgcgcgcc
     2461 aaaagcctgc ataaggcctg ccgaaacgtc cgccggaccc gccaatcggc gaaagggtcc
     2521 gcgccggcat ggcgcgtctg cgcgtgcgtg atcgaccgta gctttgtcgt catccgactc
     2581 aagcatttag cggtctgacc atggagcgaa caactcctcc ggccggatcg cgaatgctcc
     2641 taaagcggct ccgggacacg atggcgcgtg ccgacaccgt cgacgacccg ctgggtgagg
     2701 tcgtgcgcct ggtcgccaac gagatggtgg ccgaggtgtg ctcgatctac ctgctgcgcg
     2761 ccggcgaagt gctggaactg ttcgccaccc agggcctcaa cccctcggcc gtgcaccgca
     2821 cgcggctgcg ggtcggcgaa ggcctggtcg gcgacatcgc cgcccatgcg aggcccctgg
     2881 cgctcgacga cgcgcagagc catccccagt tcgcctatcg gccggagacc ggcgaggaga
     2941 tctatcactc gctggccggc gtgccgatcg tgcgcgccgg ccgcgtgctg ggcgtggtgg
     3001 tcgtccagaa ccggacgcgc cgcctgtacg acgaagaaga gatcgagact ctacagacca
     3061 tcgccatggt gctggccgag ctgatttcgg cgggtcattt cgtcagtccc aacgagatgc
     3121 agcaggtcga cgggctgggg cttctgccgc tgcgcgtcga cggcgtgcag ctgacgccgg
     3181 gagtcgccat cggccgcgcc gtgctgcacg aaccgcgcat cgccatccag aaggtcgtgg
     3241 ccgaggatat cggccaggag ctgaagcgct ttgaggatgc cgcacacggc gtgcgcgagg
     3301 acgtcgaccg catgctcgag gcgcacgaca tgcagtcggg cgagcagcgc gagatcctcg
     3361 agacctttcg catgttcatc gacgatcgcg gctggctcga gcgcgtgcgc gaggcggtgg
     3421 gctcgggcct gaccgccgaa gccggcgtcc agcgcgcctt cgacgacata cggacacggc
     3481 tcggccaatc gagcgatcct tacatccgcg agcggctgag cgatttgcag gatctcacca
     3541 accggctgct gctgcggctg agcggccgca tcgccgccga tcccagttcg ctgcccgacg
     3601 acatgatcgt catcgcccgc gacatgggtc ccgcggagct gctcgactac gaccgcacgc
     3661 ggctgcgcgg gctggtcctc gaggagggct cggcgatgag ccatgtcgcg atcgtggcgc
     3721 gggcgctcga cattccggtg gtcggccgcg cgcccgacgt gctggcgcgc atcgaggcgg
     3781 gcgactcgat cgtggtcgac ggcgacaacg cccaggtgct ggtgcggccg gccgaggaca
     3841 tcctgcagac cgtctatgcc gcgatcgacg cgcgcgccga gcggcggcgc aagtatgccg
     3901 ccctgcgcga cctgccgtcg gcgacgcgcg atcaagcgcg catctccttg cacatgaatg
     3961 ccggcctgtt gatcgacatg cagcatctcg acgacagcgg cgccgacggc gtcggcctct
     4021 atcgcaccga gattccgttc atggtgcggt cggagtttcc cgatgtcgat gcccaggcct
     4081 ggctctacgg tcgcgtgctc gatctggccg acggccggcc ggtaactttt cgcacgctcg
     4141 atgtcggcgg cgacaaggtc ctgccctatg tcggggcttt cggcgacgac aatcccgcca
     4201 tgggctggcg ggccatccgc atcggcctcg accggccggc catgctgcgc cggcaattgc
     4261 gtgcgctgat ccaggcggcc aatggccggc cgttgtcggt gatgtttccg atgatcgccg
     4321 aggtgagcga gcttttgagc gcccgccaac tgctcgacct tgaattggag cgcggcaagc
     4381 ggcgcgggca ggccgtgccc gagcgtttgc gggtcggcgt gatgttcgag gtgccggcgc
     4441 tggcgtggca gctcgacagc ctgctgccgc acgtcgactt cctttcggtg gggacgaacg
     4501 atcttttgca gtttctttat gccgccgatc gcgggaacag ccgcgtggcc ggacgctacg
     4561 acagtttgtc cccgccgctg cttcgactgc tacattttgt ggtcgagaag gcaagaccgg
     4621 ccggcgtgga cctggccgtg tgcggcgaga tggcgggccg gccggtcgag gcgctcgccc
     4681 tgttggcgat cggcgtgcgc acgctatcga tgtcgccggg cgccattgga ccggtgaaag
     4741 ccatgattcg ctcgctcgac ctcaacgagg caactggttt catgaccgct gcgctttcac
     4801 aacccgatcg acccatgcgc gagaccttgc gtctctttgc tgcagatcac gccatcgaaa
     4861 tttgaacatc acactcgaaa tctgactgtc acagtcgaat cgcttttgcc ctgtcatggc
     4921 gcgtctgcta aaaatgagtt gagaggggaa cagcagggtt catcatgccg gatcaggttg
     4981 attggcgtgc gctagaacgc gaggcctcgc caggtcgcgc ggttggccgg ttgctgcgcg
     5041 accagcgtga agcgcgcggg cttgccctgc ccgatatcga gaagaacctg cgcattcgtc
     5101 tttcccatct cgaggccatc gaggagggcc gcttcgacaa gctgcccggc gccgcctaca
     5161 tcccggcctt cctgcgcgcc tatgcagcac atgttgggct cgatcccgaa aaggtcctga
     5221 cggcctatca tctttccggc ccggtaccga tcaagcgtcc cgtcgccttg ccggccgact
     5281 ttccgattgt cgaaaagcgc gcgccgatcg gccttgcggt gctgaccatc ctgttggtcg
     5341 tcggcgcggg ttacgcggcg tggcattatt tgccgcgcga gcagtcggtc
//
LOCUS       DASWGA010001003         6687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1768612, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001003 DASWGA010000000
VERSION     DASWGA010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6687
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1768612"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..907
                     /locus_tag="VF991_22960"
     CDS             <1..907
                     /locus_tag="VF991_22960"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HEX9559372.1"
                     /translation="AADLAALAIPPRADQHSRRMASTALVANARMYSVSPETARAWHR
                     LFDWLAGASGVPLSVVEHGYPARLADLWARPDLGAAFVCGWPYASRLRDLQIVAAPIP
                     RHERAAGRAVYWTDMVVRADRPFRTLADTFGGRIAFTSKDSHSGFNAVRRLLMQHAPS
                     RHDALYSSAIGPLVTPRRSLESVLNGDADVAPVDAYAHLLLQRHCPELTAGVRTIAMT
                     ETAPIPLLVASAGTDSEPIARMRAALVGAGHDPAARGLLDDLVLEGFAEAEPADYDVT
                     QSWARDAERAGWLGLASREQAPAAG"
     gene            918..1919
                     /locus_tag="VF991_22965"
     CDS             918..1919
                     /locus_tag="VF991_22965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017991374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HEX9559373.1"
                     /translation="MPPIYITFLNRLDIEELALSDEEILAAIETSLAAQGRGQTVIEP
                     RVHLAPGQSNGHFNVLRGAINAPVDRAGIKVVGDFVDNYKLGFPSELGVVLLLDPRTG
                     APQAILDGAGITDMRTGAMTAVGAKYLARKNSKILGHIGARGSAYWNVRLLDHLFDFD
                     EIRVHSKRPESRNGFAERLARDLGKKVTATADWRACVEGADIVVEASRLMAPEPLLKT
                     EWIKPTAFIVPYGTMSAVELSLTDIASKLVVDDWGQCKGGPFGSLRAHVNAGKLSEKT
                     LHAEMGQIVAGLKPGRERDDETIIFWHRGLSLSDIALAHAMIEKSTRLGIGQKLRFS"
     gene            complement(1932..3137)
                     /gene="hutI"
                     /locus_tag="VF991_22970"
     CDS             complement(1932..3137)
                     /gene="hutI"
                     /locus_tag="VF991_22970"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HEX9559374.1"
                     /translation="MHCDRLWTGARLATMVEGKPGLGIVEKGLLAARDGRIVYAGAAA
                     DAPTCTAPEVVDCEGRWITPGLVDCHTHIVYGGNRAHEFELRLAGASYEEIARAGGGI
                     VSTMHATRAASEDELVAAALPRVDALLREGVTTMEVKSGYGLDRPSEMKSLRAARRLG
                     DERQLSVSTTFLGAHALPPEAAGDKDAYITSVCEDMLPAVAAAGLADSVDAFCETIGF
                     TPAQVARVFDKAKSLGLPVKLHAEQLSNQRGAELAARFGALSADHLEHVDERGVAALA
                     KSGVVAVLLPGAFYFVRETHKPPVETLRGHGVRIAIASDCNPGTSPLTSLLLAMNMGA
                     TLFRLTVDECLAGVTREAARALGRLGSVGTLEAGKSCDLAIWDIERPAELIYRMGFNP
                     LHQRVWKGR"
     gene            3278..4159
                     /locus_tag="VF991_22975"
     CDS             3278..4159
                     /locus_tag="VF991_22975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012649956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX9559375.1"
                     /translation="MGKGFAAVALAVVAFIGPASAQTLKVGSKNFTEQFIVAELYAAS
                     LEAAGFKVERKINLGATLVAHEALRTGAIDLYPEYTGTGLGAVMKAQGATETDPQKVY
                     QMVKAFYEKEYKLTWLKPSGVDNGYALIVRPETAQAMNLKTLSDLAKVAGKLKLGAGP
                     EFGDRRDGIKGLKEVYGIEFGEFRQFAALRLRYDALMQKQIDVANGFATDWQIAAEKF
                     APLKDDKGLFPPYFLAPVVRMDTVAGNPKAVEALERVGALIDNPTMQELNRQVEVDKK
                     EPRAVAAAFLKAKGVIR"
     gene            4201..5673
                     /locus_tag="VF991_22980"
     CDS             4201..5673
                     /locus_tag="VF991_22980"
                     /inference="COORDINATES: protein motif:HMM:NF012447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid ammonia-lyase"
                     /protein_id="HEX9559376.1"
                     /translation="MADVVAVARAGAPVRIAPGVAARLKRARRIVERFAAGDRAVYGL
                     NTGLGAAVDTALTQDEVAAFQRQAVMARAVGVGGFLATDEVRATLFVRLVGVARGASG
                     LSPAFATVIRDMLGKGLHPRARRIGTLGEADLSPLAQIFLPLVGHGEAELGGRVMPGR
                     EALRAANIEAPVLGPKDAIALLNANAYSVGTGALALHDSGLVLQAQTAAGALSLEAAG
                     ANLSPIDPRVVALRPAPGQAEASRLLLSLVKGSDLLKAKRSRRVQDPLSFRCLAPVNG
                     AAFEQLARASAAIAADLNGAGDSPAVLVDDEELMSTVNFDTTATSLAFEGLGLGLSHV
                     AAIATFRIAKLMSPGFSGLPRFLTPKAAGARTGFATVQKTVSALEAEIRHLALPLGAM
                     TAPVADGVEDYAPMTPRVVEKTHDIVRRLARLAAIELVVAAQAIDLSDGPNLGRGTSR
                     AFAFVRRHVARLDEDRPTGLDFERLAVAILAGELGAALAA"
     gene            5670..6299
                     /locus_tag="VF991_22985"
     CDS             5670..6299
                     /locus_tag="VF991_22985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9559377.1"
                     /translation="MNWALENYDRLAVALGEHVVLVGTALAISLVIALPLGIWTARRP
                     ALYVAVMTATGVLYTIPALALFALLIPFMGLGKAPAITALVLYSLLILVRNIAIGIRE
                     VPAELIEAADGMGYGKGRRLLRIELPMALPVIVAGIRITVVTQIAVATVAAYINAGGL
                     GDIIFQGITQDFGEKIAAGAVLTSLLAIAADESLKGVERRLRAATSERM"
     gene            6319..>6687
                     /locus_tag="VF991_22990"
     CDS             6319..>6687
                     /locus_tag="VF991_22990"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9559378.1"
                     /translation="MLGDVLAWLADHPQAFETAASRHIALSATALAAAMMLALPLALV
                     LVRWHRAAGPVIASVNVLRTIPSLALLAAALPLVGTGFLPSVIALTLYGLPAILINTH
                     TALREIDADVVEAGLGQGMTD"
BASE COUNT         1031 a         2342 c         2230 g         1084 t
ORIGIN      
        1 cgccgccgac ctggcagcgc ttgccattcc gccacgggcc gatcagcata gccgcagaat
       61 ggcgtcgaca gccttggtgg ccaacgcccg catgtactcg gtttcgcccg agaccgcccg
      121 cgcatggcat cgtcttttcg actggctggc cggggcaagc ggcgtgccgc tcagcgtcgt
      181 cgagcatggc tatcccgccc gcctggccga tctttgggcg aggcccgatc ttggcgccgc
      241 cttcgtctgt ggctggccct atgccagccg gttgcgcgat ttgcagatcg tcgccgcgcc
      301 aatcccccgc catgaacgag ccgctgggcg tgccgtttac tggaccgaca tggtcgtcag
      361 ggccgatcga cccttccgaa cgctcgcaga cactttcggc ggacgcatcg ccttcaccag
      421 caaggactcc cactccggtt tcaatgcggt gcgccggctc ttgatgcagc acgcgccgtc
      481 gcggcacgac gcgctctatt catcggccat cggaccgctc gtcaccccca ggcgctccct
      541 cgaatcggtc ctgaacggcg atgccgatgt cgctcccgtg gatgcctacg cgcatttgtt
      601 gcttcagcgc cattgccccg agctgacggc cggcgtgcgc acgatcgcca tgaccgaaac
      661 agcgccgatc cccttgctgg tggcgagcgc cggtaccgac agcgagccga tcgccaggat
      721 gcgcgccgcc ttggtcggcg ccgggcacga cccggcggcg cgcgggttgc tcgacgacct
      781 cgtgctcgag ggttttgccg aagccgagcc tgcggactat gacgtgacgc aatcgtgggc
      841 gcgcgacgcc gaacgcgccg gctggctcgg cctggcgtcc cgcgagcaag cgcccgccgc
      901 gggttgaaga ggtgacgatg ccgccgatct acatcacctt tctcaaccgc ctcgatatcg
      961 aggagcttgc gctcagcgac gaggagatcc tggcggcgat cgagaccagc ctggcggcgc
     1021 aaggccgtgg ccaaaccgtg atcgagccgc gcgtccacct ggcgcccggc caatcgaacg
     1081 gccatttcaa cgtcctgcgc ggggccatca acgccccggt cgaccgcgcc ggcatcaagg
     1141 tcgtgggcga cttcgtcgac aactacaagc tgggctttcc gtcggagctc ggcgtcgtcc
     1201 tgctgctcga tccgcggacc ggcgcgccgc aggccattct cgacggcgcc gggatcaccg
     1261 acatgcgcac cggcgccatg acggcggtcg gtgccaagta tctcgcgcgc aagaactcga
     1321 agatcctggg ccacatcggc gcccgcggct cggcctactg gaacgtccgc ctgctcgacc
     1381 acctcttcga cttcgacgag atccgcgtcc attccaagcg accggaaagc cgcaacggct
     1441 ttgccgaacg cttggcacgc gacctcggca agaaggtcac ggcgacggcc gattggcgcg
     1501 cttgcgtgga aggcgccgac atcgtcgtcg aggcgtcgcg gctgatggcg ccggagccgc
     1561 tcttgaagac cgagtggatc aagcccaccg ccttcatcgt tccctacggc acgatgagcg
     1621 ccgtcgagct gtcgctgacc gatatcgcct ccaagctcgt cgtcgacgat tgggggcaat
     1681 gcaagggcgg tccgttcggc agcctgcggg cgcatgtcaa cgccggcaag ctgtcggaga
     1741 agaccctgca tgccgagatg ggtcagatcg tcgccggcct gaagcccggc cgggagcgcg
     1801 acgacgagac gatcatcttc tggcaccgtg ggctgtcgct ctccgacatc gcgctcgccc
     1861 atgccatgat cgaaaagagc acgcggctcg gcatcggcca aaagctgcgc ttctcttgac
     1921 cggccgaacc gtcagcgccc cttccagacc cgctgatgca gcgggttgaa gcccatgcgg
     1981 tagatcagct cggcgggacg ttcgatgtcc cagatcgcca gatcgcagga tttgcccgct
     2041 tcgagcgtgc cgacgctgcc cagccggccg agcgcgcggg cggcttcgcg ggtgacgccc
     2101 gccaggcatt catcgacggt gaggcggaac agcgtggcgc ccatgttcat cgccagcagc
     2161 agtgacgtga gaggcgatgt gccgggattg cagtccgagg caatggcgat gcgaacgccg
     2221 tgcccgcgca gtgtctcgac cggtggcttg tgcgtctcgc gcacgaaata gaaggcgccg
     2281 ggcagcagca ccgccaccac gcccgacttt gccaaagcag cgacgcccct ttcgtcgaca
     2341 tgctcgaggt ggtcggccga caacgcgccg aagcgcgcgg cgagctcggc gcccctctgg
     2401 ttggacaatt gctcggcgtg cagcttcacc ggtaggccga gggacttggc cttgtcgaaa
     2461 acgcgcgcga cctgcgccgg ggtgaaaccg atggtctcgc agaaggcgtc gaccgagtcg
     2521 gcaagccccg ccgcggcaac ggccggcagc atgtcctcgc agaccgacgt gatataggca
     2581 tccttgtcgc cggccgcttc cggcggcagc gcatgggcgc cgaggaacgt cgtcgacacc
     2641 gagagttgcc gctcgtcgcc cagccgccgc gccgcgcgca gcgacttcat ctcgcttggc
     2701 cggtcgagcc cgtagcccga cttcacttcc atggtcgtta cgccctcgcg cagcagggca
     2761 tcgacgcgcg gcagggcagc ggccaccagc tcatcctcgc tggccgcccg ggtcgcatgc
     2821 atggtcgaaa cgatgccgcc gccggcgcgc gcgatctcct cgtagctcgc acctgcgagc
     2881 ctcagctcga attcatgggc gcggttgccg ccatagacga tgtgggtgtg gcagtcgacc
     2941 agccccggcg tgatccagcg gccctcgcag tcaacaactt ccggcgcggt gcaggtgggc
     3001 gcatcggccg cggcaccggc gtagacgatg cggccatcgc gcgccgctaa aagtcccttt
     3061 tcgacgatcc cgagacccgg cttgccctct accattgtgg ccaggcgggc gcccgtccag
     3121 aggcgatcac agtgcatgtc ggtaccaaac cactcttggc cgtacgacgc tagacccggt
     3181 cccttaagcg acgaggctac tgcgtgcgca gtagcgcgct ccccgtgggc tgcgctaggc
     3241 tgccgcacgc acaaacgggg gtaagcggat gggaattatg ggcaaagggt tcgccgccgt
     3301 ggcgctcgcc gtggtggcgt tcatcggtcc tgcgtcggcg cagacgctga aggtcggctc
     3361 caagaacttc accgaacagt tcatcgtcgc cgagctctac gccgcctcgc tcgaggcggc
     3421 cggcttcaag gtcgagcgca agatcaacct cggcgcgacg ctggtggcgc atgaggcgct
     3481 gcgcaccggc gccatcgacc tctatcccga atacaccggc acgggtctgg gcgcggtcat
     3541 gaaggcgcaa ggcgcaacgg agaccgaccc gcagaaggtc tatcagatgg tgaaggcctt
     3601 ctacgagaag gagtacaagc tcacctggtt aaagccctcc ggcgtggaca acggctatgc
     3661 cctcatcgtg cgtccggaga cggcgcaggc gatgaacctc aagacgctga gcgacctcgc
     3721 caaggtcgcg ggcaagctca agctcggcgc cgggccggaa ttcggcgacc gccgcgacgg
     3781 catcaagggc ctgaaggagg tctacggcat cgagttcggc gagttccgac agttcgctgc
     3841 gctgcggctg cgctacgacg cgctgatgca aaagcagatc gacgtcgcca acggttttgc
     3901 caccgactgg cagatcgcgg cggagaagtt cgccccgctc aaggacgaca agggcctctt
     3961 cccgccttac ttcctggcgc cggtggtgcg catggatacc gtggcgggca atcccaaagc
     4021 cgtcgaggcg ctcgagcgtg tcggcgcgct gatcgacaac ccgacgatgc aggagctcaa
     4081 ccgccaggtc gaggtcgaca agaaggaacc gcgcgccgtc gcggccgcct tcctcaaagc
     4141 caaaggggtg atccgctgac gcccaaccgg gcggtcgagg tcggcaagcg agcgatcgac
     4201 atcgccgacg tcgtggcggt ggcgcgcgcc ggagcccctg tgcggattgc gccgggagtc
     4261 gcggcacgtc tcaaacgcgc gcgccggatc gtcgagcgct ttgccgccgg cgatcgcgcg
     4321 gtctatggcc tgaataccgg cttgggcgcc gcggtcgaca cggcgctcac ccaggatgag
     4381 gtcgcagcct tccagcgtca ggccgtgatg gcgcgcgcgg tcggcgtcgg cggcttcctc
     4441 gccaccgacg aagttcgggc gacgctgttc gtgcgcttgg tcggcgtcgc ccgcggcgct
     4501 tcgggtcttt cgcccgcctt cgccaccgtc attcgcgaca tgctgggcaa gggccttcat
     4561 ccccgcgcgc gccgcatcgg aacgctgggc gaggcggatt tgagcccgtt ggcccagatt
     4621 ttcctgcctc tggtcggcca cggcgaggcc gaactcggcg gccgcgtcat gcccgggcgc
     4681 gaggcattgc gcgcggcgaa catcgaagcg ccggtgcttg gtcccaagga tgcgatcgcg
     4741 ctcctgaatg ccaatgccta cagcgtcggc acaggcgcgc tcgcgctgca cgattcaggg
     4801 ctggtgctgc aagcgcagac cgcggccggc gcgttgtcgc tcgaggcggc cggcgccaac
     4861 ctctcgccga tcgatccgcg cgtggtcgcg ctgcggcccg cgcccggaca ggccgaggcc
     4921 tcgcgactgc tgctgtcgct cgtcaagggc agcgatctcc tcaaggcaaa acgttcgcga
     4981 agggtgcagg atccgctgtc gtttcgttgc ctcgccccgg tgaacggcgc ggccttcgag
     5041 cagcttgccc gcgcatcggc ggcgattgcg gccgacctca acggcgccgg cgacagcccg
     5101 gccgtgctgg tcgacgacga ggagctgatg tcgacggtga atttcgacac gacggcgacg
     5161 tcgcttgcct tcgaaggcct ggggctcggg ctgtcgcacg tcgccgccat cgccaccttc
     5221 cgcatcgcca agctgatgtc gcccggcttc tccggcctgc cgcgctttct cacgcccaag
     5281 gcggccggcg cgcgcaccgg cttcgccacc gtccagaaga ctgtatcggc gctggaggcc
     5341 gagatccgcc atctcgcctt gccgcttggc gccatgaccg cgcccgtggc cgacggcgtc
     5401 gaggactacg cccccatgac cccgcgcgtg gtcgagaaga cgcatgacat tgtgcgccgc
     5461 ctcgcgcgcc tggcggcgat cgagctcgtc gtcgcagccc aggcgatcga tctcagcgat
     5521 ggaccaaatc tcggtcgcgg cacgagccgg gcctttgcct tcgtgcgcag gcacgtcgcc
     5581 aggctcgacg aagatcgtcc gactggtctc gacttcgagc gtctcgccgt agccatcctt
     5641 gccggcgagc tcggcgccgc gctcgcggca tgaactgggc actcgagaac tacgatcggc
     5701 tggccgtcgc cctcggtgag cacgtcgtgc tggtggggac agcgcttgcg atctcgctgg
     5761 tgatcgcctt gccgctcggc atctggacgg cgcggcggcc ggcgctctat gtcgccgtca
     5821 tgacggcgac gggtgtgctc tacaccattc cggcgctggc gctgttcgcg ctcctcatcc
     5881 ccttcatggg gctgggcaag gcgccggcga tcacggcgct ggtgctctac tcgctcctca
     5941 ttctggtgcg caacatcgcg atcggcatcc gcgaggtgcc ggccgagctg atcgaagccg
     6001 ccgacggcat gggctacggc aagggacggc ggctgctcag gatcgagctg ccgatggcgc
     6061 tgcccgtcat cgtggccggc atccgcatca ccgtggtcac gcagatcgcg gtcgccaccg
     6121 ttgccgccta tatcaatgcc ggcgggctgg gcgacatcat cttccagggc atcacccagg
     6181 atttcggcga gaagatcgcg gccggcgccg tgctcacctc gctgctggcg atcgcggccg
     6241 acgagtcgct gaagggggtc gaacggcgcc tgcgcgccgc cacctcggag cgcatgtgat
     6301 gcgctcggag cgcctctgat gctgggcgac gtcctcgcct ggcttgccga ccacccgcag
     6361 gccttcgaaa cggcggccag ccgacatatc gccctctcgg ccacggccct ggctgcggcc
     6421 atgatgctgg ccctgccgct ggcgctcgtg ctggtgcgct ggcaccgcgc ggcggggccg
     6481 gtaatcgcat cggtcaatgt gctgcgcacc atccccagcc tcgccttgct ggcggccgcc
     6541 ctgccgctgg tcggcaccgg cttcctgccg tctgtcatcg cgctcacgct ctacggtctg
     6601 ccggcgatcc tcatcaacac ccatacggcg ctgcgggaga tcgatgccga cgtggtcgaa
     6661 gccgggctcg gacagggcat gaccgac
//
LOCUS       DASWGA010001004         2891 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_120901, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001004 DASWGA010000000
VERSION     DASWGA010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120901"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VF991_22995"
     CDS             complement(<1..435)
                     /locus_tag="VF991_22995"
                     /inference="COORDINATES: protein motif:HMM:NF024801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9559379.1"
                     /translation="MELFASPMACSLASHITAIEAGLPVKVRFVENKKTDDGGDYYKI
                     SAKGYVPALRLDDGQVLNEGPSVLQYLADAAPKSELAPAWGTLERYQLIDTLNYLSTE
                     VHKRIFANVFNPNAAEPTKQAAKALFEPTLDYLAQRLGSSEYL"
     gene            503..1108
                     /locus_tag="VF991_23000"
     CDS             503..1108
                     /locus_tag="VF991_23000"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9559380.1"
                     /translation="MRSSTEITTRSRGRPRAFIPSEVLDRVRTVFLEKGFAAASLDEL
                     AAASGLNRPSLYAAFGDKEELYIATLRFYGARSVEGLEAVLNGPGTIRQRLGTVYKMA
                     IDLYTAPPHRPGCMIVGTAAVEAPTHPRIAAVANALLVMIEKHLERAFAASGLPKKPS
                     PAARAHMAGAILHAIAIRARLGTKAVDLRAFAASMVPTICG"
     gene            1131..2546
                     /locus_tag="VF991_23005"
     CDS             1131..2546
                     /locus_tag="VF991_23005"
                     /inference="COORDINATES: protein motif:HMM:NF015043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid oxygenase family protein"
                     /protein_id="HEX9559381.1"
                     /translation="MTGKAAYPWSAGFRTLDEEHSYRIDEIDGQVPAGLRGTLFRNGS
                     GRNELAGQWFPHWFDGDGMISAIRFDDGGIHYRNRYVATDNYRDETRAGRIVHRGFGK
                     MRPGGFLANAFRQPANVSNTSVVMEHGRLLSLWEGGPPVALDPATLDTLGVEVFGGTV
                     KAFSAHPKIDPETGELFNFGIDYGAKTTLTPYRIDKGIVTRLPQVTLPYPVMNHDFVL
                     TKNHLAFCIGPILVLPLKFLLGFSSFDGALHWEAKRPTLILLVPRDGRGKPRIIETDA
                     FFQFHFANGFEEDGALVLDLARYPDYHTIGQVLRDYWKSEWPSRGMAALTRLRVDLST
                     GKVESRTYDSGTGNEFPRINPAYTGKRQRYAYIACNPADRVQGLQQQLARVDLETGTV
                     SRHDFGPDGYPGEPLFVATRPGGAEDDGVVVTLVFDAARQRSDIVGLDARDLGAKPLF
                     VARLKHHVPFPLHGTFTPRLF"
     gene            complement(2557..>2891)
                     /locus_tag="VF991_23010"
     CDS             complement(2557..>2891)
                     /locus_tag="VF991_23010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9559382.1"
                     /translation="VDAARALGFSHARIVLRHMVPNVVAPFLILLSAFVGQAILAEAS
                     LSYLGLGVQEPVAAWGLMLQGGAEEYATTAPWIAVFPGLAIVLTVLGISLFGDALRDA
                     IDPKLRDR"
BASE COUNT          492 a          975 c          932 g          492 t
ORIGIN      
        1 gaggtattcg ctgctgccca ggcgctgggc gagataatcg agcgtcggct cgaacagcgc
       61 cttggccgct tgcttggtgg gctccgcggc attgggattg aagacgttgg cgaagatgcg
      121 cttgtgcact tcggtcgaga ggtagttcag cgtgtcgatg agctggtagc gctcgagcgt
      181 gccccaggcc ggcgccagct ctgacttggg cgcggcgtcg gccaggtact gcagcaccga
      241 cggcccctcg ttcaggacct ggccgtcgtc gagccgcagc gccggcacgt agcccttggc
      301 cgagatcttg tagtagtcgc cgccgtcgtc ggtcttcttg ttctcgacga agcggacctt
      361 gaccggcaga ccggcctcga ttgccgtgat atgcgaggcg agcgagcagg ccatgggtga
      421 ggcgaagagt tccataacgt cctccttgtt tttgtgcgat acagtacaga attacaaagg
      481 gccgagtgcg tcaaggataa ttatgcgaag cagtacagaa ataacgacac ggtcacgcgg
      541 ccggccacgc gccttcattc cctccgaggt acttgaccgc gtacgcacgg tgttcctgga
      601 aaagggcttc gccgccgcct cgctcgacga gctggccgcc gcctcgggcc tcaaccggcc
      661 gagcctctac gccgcgttcg gcgacaagga ggaactctac atcgccaccc tgcgcttcta
      721 tggcgcccgc agcgtcgagg gcctcgaggc cgtcctgaac ggaccgggca cgatcaggca
      781 gcgcctcggc acggtctaca agatggcgat cgatctctac accgcgccgc cgcaccggcc
      841 gggctgcatg atcgtgggca ccgcggccgt cgaagcgccc acccatccgc ggatcgccgc
      901 cgtcgccaac gcgcttttgg tgatgatcga gaagcacctc gaacgtgcct tcgccgcgag
      961 cggtctgccg aagaagcctt cgcccgccgc ccgcgcgcac atggccggcg ccatcctgca
     1021 cgccatcgcc atccgcgcgc ggctgggaac caaggccgtc gatctccgcg cctttgccgc
     1081 ctcgatggtg ccgacgatct gtggatgaag tcgtgctaca gtgcgggcgt atgaccggca
     1141 aagccgccta tccctggagc gcggggtttc gcacgctcga cgaagagcac agctacagga
     1201 tcgacgagat cgacggccag gtgccggcgg gcctgcgcgg cacgctgttc cgcaacggct
     1261 cgggccgcaa tgagcttgcc ggccagtggt tcccgcactg gttcgatggc gacggcatga
     1321 tctcggcgat ccgcttcgac gacggcggca tccactatcg caaccgctat gtcgcgaccg
     1381 acaactaccg cgacgagacc cgcgccggcc gcatcgtcca tcgcggcttc ggcaagatgc
     1441 ggcccggtgg ttttttagcc aacgcctttc gacaaccggc caacgtctcc aacacatcgg
     1501 tcgtcatgga gcacggacgg ctgctttcgc tgtgggaggg cggtccgccc gtcgcgctcg
     1561 atccggcgac gctcgatacg ctgggcgtcg aagttttcgg tggcaccgtg aaggctttct
     1621 cggcccatcc caaaatcgac cccgagaccg gcgagctgtt caatttcggc atcgactacg
     1681 gcgccaagac cacgctcacg ccctatcgca tcgacaaggg catcgtgacg cgtctgccgc
     1741 aggtcaccct gccctacccg gtcatgaacc acgatttcgt gctgaccaag aaccacctgg
     1801 cgttctgcat cggcccgatc ctggtgttgc cgctgaaatt cctgctgggc ttctcgagtt
     1861 tcgacggcgc gctccactgg gaggccaagc ggccgaccct gatcctgctg gtgccgcgcg
     1921 acggacgggg caagccgcgc atcatcgaga ccgacgcctt cttccagttc cacttcgcca
     1981 acggtttcga ggaggacggc gcgctggtct tggacctggc gcgctatccc gactaccaca
     2041 cgatcggcca ggtgctgcgc gattactgga agtcggagtg gccgagccgc ggcatggccg
     2101 cccttacccg gctgcgggtc gatctgtcga ctggcaaggt cgagagccgg acctacgata
     2161 gcggcacggg caacgagttc ccgcgcatca atccggccta taccggcaag cgtcagcgct
     2221 acgcttacat cgcctgcaat ccggcagacc gtgtacaggg cctgcagcag cagctcgccc
     2281 gcgtcgatct tgagaccggc acagtgtcgc ggcacgattt cggcccggac ggttatcccg
     2341 gcgagccgct ctttgttgcg acgcgtcccg gcggcgcgga ggatgatggc gtggtggtaa
     2401 cgctagtctt cgatgccgcc cgccagcgca gcgacattgt cggcctcgat gcgcgcgacc
     2461 ttggtgcgaa gccgttgttc gtggccaggc tcaagcacca cgtgccgttc cccctgcacg
     2521 gcaccttcac gccacgcctg ttctgaggcc agccggtcaa cggtcgcgca gcttgggatc
     2581 gatggcgtcg cgtagcgcgt cgccgaacag gctgatgcca agcacggtga gcacgatcgc
     2641 gaggccggga aagaccgcga tccacggcgc ggtggtggcg tattcctcgg cgccgccctg
     2701 cagcatcagg ccccaagccg ccaccggctc ctgcacgccg aggccgagat acgacagcga
     2761 cgcctctgcc aggatggcct ggccgacgaa ggccgacaac aggatcagga acggcgccac
     2821 gacattgggc accatgtggc gcagcacgat gcgggcgtgg ctgaagccga gcgcgcgggc
     2881 agcgtcgaca a
//
LOCUS       DASWGA010001005         1959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1889978, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001005 DASWGA010000000
VERSION     DASWGA010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1889978"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1959)
                     /gene="alaS"
                     /locus_tag="VF991_23015"
     CDS             complement(<1..>1959)
                     /gene="alaS"
                     /locus_tag="VF991_23015"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012651592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEX9559383.1"
                     /translation="CSEIFFDHGEGIPGGPPGSPDADGDRFIEIWNLVFMQYEQLTKD
                     QRVNLPKPSIDTGMGLERIAAVLQGKHNNYDIDLFRALIEAVAHETGVDPDGPQSASH
                     KVIADHLRTTSFLIADGVLPSNEGRGYVLRRIMRRAMRHAHILGASEPMVFKLVPTLV
                     HEMGDAFPELVRAQPLITETLKLEEGRFKKTLGTGLKLLDDETRNLAAGGTLKGDVAF
                     KLYDTYGFPLDLTQDVLRARGITVDTAGFEKAMDEQRAKARAAWAGSGETADQAIWFD
                     VRQKAGATEFLGYDTERAEGQIKAIVLDGKEVSSLKAGQTGWLVANQTPFYAESGGQL
                     GDTGRFVGANGEAAITDVQKMVGDLHAHHAKVEKGELKVGDDVVMTIDPIRRAQLRAH
                     HSATHLLHEALRRHLGEHVTQKGSLVAPDRLRFDISHTKPISLEELRKIEDEVNERIR
                     LNSPVDTRLMTPEEAIAAGAVALFGEKYGDEVRVLSMGGENGEQYSVELCGGTHARRT
                     GDIGLFKIVGEGAVSAGVRRIEALAGAAAEEHVRHQVQLLNEAAAALKVRPEDLPARL
                     AALMEGQRKIERELSEARKALALAGGSASSAAADEVRDVGGIKLIGRVLNGVPGKDLK
                     GMADEFKKKLGSGVVALMGVEDGKASAVV"
BASE COUNT          274 a          691 c          640 g          354 t
ORIGIN      
        1 accaccgccg atgccttgcc atcctccacg cccatcaatg cgaccacgcc tgagcccagc
       61 ttcttcttga actcgtcggc catgcccttg aggtccttgc ccggcacgcc attcagaacc
      121 cggccgatca gctttatgcc gcccacgtcg cgcacctcgt cggccgccgc gctggacgcg
      181 ctgccgccgg ccagcgccag cgccttgcgc gcctcgctga gctcacgctc gatcttgcgt
      241 tggccttcca tcagggccgc cagccgtgcc ggcagatcct cgggccgcac tttcagcgcc
      301 gccgccgcct cgttcaaaag ctggacctga tggcgcacat gctcctcggc cgccgcaccg
      361 gccagagcct cgatgcgccg cacaccggcc gacacggcgc cttcgccgac gatcttgaac
      421 aggccgatgt cgccggtgcg cctggcatgg gtgccgccgc agagttcgac ggagtattgc
      481 tcgccattct caccgcccat cgacagcaca cgcacttcgt cgccatactt ctcgccgaag
      541 agcgccacgg cgccggcggc gatcgcctcc tccggcgtca tcagccgcgt gtcgaccggg
      601 ctgttcagcc ggatgcgctc gttgacctcg tcctcgatct tgcgcagctc ctcgagcgag
      661 atcggcttgg tgtggctgat gtcgaagcgc agccggtcgg gcgccaccag cgagcccttc
      721 tgggtgacgt gctcgccgag atggcggcgc agcgcctcgt gcagcaggtg cgtcgccgaa
      781 tggtgggcgc gcagctgggc gcggcggatc gggtcgatgg tcatgaccac gtcgtcgccg
      841 accttcagct cgcccttctc gaccttggcg tgatgggcat gcagatcgcc caccatcttt
      901 tgcacgtcgg tgatcgcggc ctcgccgttc gctccgacga agcgaccggt gtcgccgagc
      961 tggccgcccg actcggcgta gaacggggtc tggttggcga cgagccagcc ggtctgtccg
     1021 gccttcagcg acgagacctc cttgccgtcg agcacgatcg ccttgatctg gccctcggcg
     1081 cgttctgtgt cgtagcccag gaactcggtg gcacccgcct tctgccgaac gtcgaaccag
     1141 atcgcctggt cggcggtctc gcccgagccc gcccaggcgg cgcgcgcctt ggcgcgctgc
     1201 tcgtccatcg ccttctcgaa gccggccgtg tcgacggtga tgccgcgcgc gcgcaaaacg
     1261 tcctgcgtca ggtcgagcgg gaagccgtag gtgtcgtaga gcttgaaggc gacgtcgccc
     1321 ttgagcgtgc cgccggcggc gaggttcctt gtctcgtcgt ccagaagctt caacccggtg
     1381 cccagggtct tcttgaagcg gccctcctcg agcttcagcg tctcggtgat cagcggttgc
     1441 gcgcggacca gctcgggaaa ggcgtcgccc atctcgtgca cgagcgtggg caccagcttg
     1501 aacaccatcg gctcgctggc ccccaggatg tgggcatgcc gcatcgcccg acgcatgatg
     1561 cggcgcagca cgtagccgcg gccttcgttc gagggcagaa cgccgtcggc gatcaggaac
     1621 gaggtggtgc gcaaatgatc ggcgatcacc ttgtgcgagg ccgattgcgg gccgtcggga
     1681 tcgacgccgg tctcgtgcgc caccgcctcg atcaaggcgc ggaacaggtc gatgtcgtag
     1741 ttgttgtgct tgccctgcag gacggcggcg atgcgctcca gccccatgcc ggtgtcgatc
     1801 gagggcttgg gcaggttgac acgctggtct ttggtcagct gctcgtactg catgaagacc
     1861 aggttccaga tctcgatgaa gcgatcgccg tcggcgtcgg ggctgcccgg tgggccgccg
     1921 gggatgcctt cgccgtggtc gaagaagatc tccgagcac
//
LOCUS       DASWGA010001006         2842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1257228, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001006 DASWGA010000000
VERSION     DASWGA010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2842
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1257228"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(244..1062)
                     /locus_tag="VF991_23020"
     CDS             complement(244..1062)
                     /locus_tag="VF991_23020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX9559384.1"
                     /translation="MPYETIDVRKLTPAIGAEISGVDLGNPLSNRQASELHDALMAHQ
                     VIFFRDQHMSVEQHKAFGRLFGELLVHPAARAEVEGHPEIRVVHADEKTKVATGEVWH
                     SDLSCEPEPPMGSILYLHQTPPVGGDTAFANMYLAYETLSAPIKRLVEGLSAFHTSAH
                     VYSRDDYGRSDKKFPEAVHPMVRTHPVTGRKCLFVNRGFTKRIEGLGKHESDALLEML
                     VRHCETPEFQCRFRWDRQSVAFWDNRCVMHRATFDYHPHVRHGHRVTIKGDRPY"
     gene            complement(1088..1741)
                     /locus_tag="VF991_23025"
     CDS             complement(1088..1741)
                     /locus_tag="VF991_23025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559385.1"
                     /translation="MKILIAFLLISFLAAGRALAQIPPEWQAAAQAVIGELERDTPQA
                     AKPWGNELTQGWHLARAWRKHNNGNVEIILAEYLTFVVLCRRGCAGNTIEGQGYLAMA
                     EQVKALRLQQGGPYGVAVNANAWLAGLPDPTGAAAKNANLWSKDLDVAAADFATGNLY
                     ALAWLLARTRPTPAEQADTFARFAILVQGKGWIGARCLDISKVATVLDAPPRIENCK"
     gene            complement(1754..2419)
                     /locus_tag="VF991_23030"
     CDS             complement(1754..2419)
                     /locus_tag="VF991_23030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559386.1"
                     /translation="MRVSKRHPRPAEIGLAAEEGRILRALTTPQHIQEFVIGLHANFE
                     ESGDTLRSVRGVLRHRRAHCIEAAFVAACALWLHGEPPLIVDMTAKRDSDHVIAVFRR
                     NGCWGAISKSNHVWLRWRDPVYRSLRELAMSYFHEYTNKQRKSLRTYSAPVDLRRFPT
                     EMWVSNEEDCWEVGAALDDVRHYRLITPAQARRLVPRDATELRADDLVQYDSRDRKRA
                     RRY"
     gene            complement(2467..2542)
                     /locus_tag="VF991_23035"
     tRNA            complement(2467..2542)
                     /locus_tag="VF991_23035"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2507..2509),aa:Ala,seq:cgc)
     gene            2659..>2842
                     /locus_tag="VF991_23040"
     CDS             2659..>2842
                     /locus_tag="VF991_23040"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HEX9559387.1"
                     /translation="MANSSKKVVQSDAAPKALGPYSQAIVANGMVFCAGQIPLDPATG
                     DLVAGGIAEQTHQVLKN"
BASE COUNT          486 a          881 c          978 g          497 t
ORIGIN      
        1 caaggtgcaa aaggcgctgg gcgacatggg cgtgatggaa tacgccaaga tcgacgtcga
       61 aaagctttta ggcaacgacc tcaaggtcgc cgaggatttc gacgccaaga agttcgtgaa
      121 ggacgcgatc gccgccgaat agcggcagtt gtcatcccga gggcgaagcc cgagggacct
      181 ttaaggcaac aggaaaggtc cctcgctgcg ttcgggatga caagttgtaa cgcctctcgt
      241 gcgtcagtag ggcctgtcac ccttgatcgt cacgcgatgg ccgtggcgca cgtgcgggtg
      301 atagtcgaac gtggcgcggt gcatgacgca gcgattgtcc cagaaggcga cggactggcg
      361 gtcccagcgg aagcggcact ggaattccgg cgtctcgcag tggcgcacca gcatctcgag
      421 cagcgcgtcg ctctcgtgct tgccgagccc ttcgatgcgc ttggtgaagc cgcggttgac
      481 gaacaggcat ttgcgccccg tcaccggatg ggtgcgcacc atgggatgga ccgcctcggg
      541 aaacttcttg tcgctgcggc cgtagtcgtc gcgtgaatag acgtgggcgc tggtgtggaa
      601 cgcactcaag ccctcgacca ggcgcttgat cggcgccgac agcgtctcgt aggcgaggta
      661 catgttggcg aaggcggtgt cgccgccgac cggcggcgtc tggtgcaggt aaaggatcga
      721 gcccatcggc ggctcgggct cgcacgacag gtcggagtgc cagacttcgc cggtcgccac
      781 cttggtcttt tcgtcggcat ggacgacgcg gatctcggga tgtccctcga cctcggcccg
      841 ggcggcggga tggactagaa gctcgccgaa caggcggccg aacgccttgt gctgctcgac
      901 gctcatgtgc tggtcgcgga agaagatcac ctggtgcgcc atcaacgcgt cgtgcagctc
      961 gctcgcctgg cgattcgata gcgggttgcc gaggtcgacg ccggaaatct ccgcgccgat
     1021 tgccggggtg agcttgcgaa cgtcgatcgt ctcgtagggc atggcgcgat gatccgctct
     1081 cggccggcta tttgcaattc tcgatccgcg gcggcgcgtc gagcaccgtc gccaccttgg
     1141 agatgtcgag gcaacgcgcg ccgatccagc ccttgccctg caccaggatg gcgaagcgcg
     1201 cgaatgtatc ggcctgctcg gctggagtcg gccgggtccg ggccagcaac caggccagcg
     1261 cgtagaggtt gccggtagcg aaatcggcgg ccgccacatc gaggtccttg ctccacagat
     1321 tggcgttctt ggcggcggca cccgtcggat caggcaggcc cgccagccag gcgttcgcat
     1381 tgacggccac gccgtatggc ccgccctgct ggaggcgcag cgccttcacc tgctcggcca
     1441 tggccaagta gccctgtccc tcgatcgtgt tgccggcgca gccgcggcgg cacaggacga
     1501 cgaaggtgag gtactccgcc aggatgatct cgacgttgcc gttgttgtgc ttgcgccacg
     1561 cgcgcgccag atgccagcct tgggtgagct cgttgcccca cggcttggcg gcctgcggcg
     1621 tgtcgcgctc caattcgccg atcaccgcct gggccgcggc ctgccattcc ggcgggatct
     1681 gggccaaggc gcgtccagcg gcgaggaagg agatgagcag gaatgcgatc aggattttca
     1741 tcgcgaggcc tcttcagtat cggcgggcac gcttgcggtc gcggctatcg tactgcacca
     1801 aatcgtcggc cctgagctcg gtggcgtcgc gcggcaccag gcggcgtgcc tgggccggcg
     1861 tgatcagccg atagtggcgc acgtcgtcga gcgcggcgcc gacctcccag cagtcttcct
     1921 cgttggagac ccacatctcg gtcgggaagc gccgcaagtc gaccggggct gagtaggtgc
     1981 gcagcgattt acgctgcttg ttggtgtatt cgtggaagta cgacatcgcc agttcgcgca
     2041 ggctgcgata gaccggatcg cgccagcgca accagacatg gttgctcttg gagatggcgc
     2101 cccagcagcc gttacggcga aagacagcga tgacgtgatc ggaatcgcgc ttggcggtca
     2161 tgtcgacgat cagcggcggc tcgccgtgca gccacagcgc gcaggcggcg acgaaggcgg
     2221 cttcgatgca gtgcgcgcgg cggtggcgca gcacgccgcg gaccgagcgc agcgtgtcgc
     2281 cgctttcctc gaaattggcg tgcaggccga tgacgaattc ttggatgtgt tgcggcgtgg
     2341 tgagcgcgcg caggatacgc ccttcttcgg cggcgaggcc gatctcggcc ggccgaggat
     2401 ggcgtttgga aacacgcatg ggaccctgag ggtccctcgc cacggtcggg atgacaacag
     2461 tccggttggt ggagctgagg gggatcgaac ccctgacctc ctcattgcga acgaggcgct
     2521 ctcccagctg agctacagcc ccccatcaac cgaaacaaaa agggtccaag gaaggcgcgg
     2581 ataatggttg ccgcctccgc tgtcaagcaa accgccctgt gttagcgtct ttgccgatcc
     2641 ttcagggaga gttggcccgt ggcaaacagc agcaaaaagg tcgtccagtc ggacgccgcg
     2701 cccaaggcgc ttggtcctta ttcccaggcg atcgtggcca acggcatggt gttctgcgcc
     2761 ggccagatcc cgctcgatcc cgcgaccggc gatctggtcg ccggcggcat cgccgagcag
     2821 acgcatcagg tgcttaaaaa cc
//
LOCUS       DASWGA010001007         1736 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2397643, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001007 DASWGA010000000
VERSION     DASWGA010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2397643"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..1349)
                     /locus_tag="VF991_23045"
                     /pseudo
     CDS             complement(36..1349)
                     /locus_tag="VF991_23045"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
     gene            1451..>1736
                     /locus_tag="VF991_23050"
     CDS             1451..>1736
                     /locus_tag="VF991_23050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEX9559388.1"
                     /translation="MATDFDAVVVGAGFGGMYMLHRLRLKGFSVRVFEAGQGVGGTWY
                     WNRYPGARCDVESVQYSYQFSPELQQEWEWTERYATQPEILRYANHVADRF"
BASE COUNT          258 a          611 c          597 g          270 t
ORIGIN      
        1 ctaattcgct ccttggtcag ggcccgggct cggcctcagg tcctcagcgt ctccgcgttc
       61 ctggcctgtc tcttctcgtc ccaccaatcg ctggcctgca gctgccaata gacgagctgc
      121 gtggcgaggc ggcccaacgg accgccggcc cagcggacgc cgaacggctc gaatagccgc
      181 cagcggtcgt cctcgccggc gatgccggcg gccacggcat cggccccggc cgccgtctgg
      241 gccagcccgt ggccgccgaa cgccgagcac acccacaggc cgggttcgat ctcgccgacc
      301 tgcggcatca tgtgcggcgc gtagcccatg atgccgggcc aggcatattc gatcgcgatg
      361 tcgccgagct gcggatagac cgcgagcatg tcggcccgca tcatcgcccg cagccggggc
      421 ggttcgcggg tatccgtggt gattcggccg ccccagagaa gacggtcgcc atcgacgacg
      481 cgatagtaat cgccggcgcg gcgggtgtcg gagatcgcgc cgggccaacg gatggcttcg
      541 gcgagccggg gaccgatctt cgccgtcacc gcgacatagg tcgccaccgg caggacggcg
      601 cgcgcaagcc gcggctgcac ccggccgaga tcggcgttgc ccgcgagcac gacgtgacgc
      661 gcggcgatct cgccgtccgg cgtgcgcagg cgccagacgg ccccttgctg gtcgaggtcg
      721 atcgcctcgc tgcgctcatg gacctgtccg ccgcgccgtt cgatgtcgct tgccagggcc
      781 agcgcgaggt tgagcggatg gatgtgaaag gattgcggat cgtggatcgc ctggtgatag
      841 cgctcgctta cgagcagggc gcgcacgcgc gcgctctccc acggctcgaa gctggcgccg
      901 agcttttcgg ccagcgcgcg cgtgcgctcg gcgaagcctg cgccctggtc ggtgcgcgag
      961 accgtgagct tgcccgaccc catgcggatg tcaggccggc ccaggtcgtc gattgccgcg
     1021 cgcacgatcg ccacgccgcg ctgcgactgg gcgtagagcc tgcgcgcatg gtccaacccc
     1081 aatctgtcga tcagcgcgcc cgaccgcgcg gcgaagcccg ggctgacgaa gccgccgttg
     1141 cgtccggagg cgcctcagcc gatgcgccga cgctcgacca gcacgacctt gaagccgcgc
     1201 atcgccagca gccgcgcggt gtgcaggccg gcaaagccgc cgccgccgac cgccacgtcg
     1261 gcctcgacct tgcccgatag cggcggccga tcggggctaa aatctcgcgt ggcggcatac
     1321 cagcttgccg gatagtcggt gtcggccatc tcgggttgtc tccgcggcaa ctggtgccac
     1381 aggaaggctt gcgcggccac cgtccctgtc gcactaagaa cgcatcagat tgggttcgtt
     1441 ggaggaagca atggcgaccg atttcgatgc tgtggtggtc ggcgccggct tcggcggcat
     1501 gtacatgctg catcgtctgc gcctgaaagg cttcagtgtg cgcgtgttcg aggccggcca
     1561 aggggtcggc ggtacctggt actggaaccg ctatcccggc gcgcgttgcg acgtcgaaag
     1621 cgtgcaatat tcctaccaat tctcgcccga gctgcagcag gaatgggagt ggaccgagcg
     1681 ctacgccacc cagcccgaga tcctgcgcta cgccaaccac gtcgccgacc gcttcg
//
LOCUS       DASWGA010001008         3258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1769275, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001008 DASWGA010000000
VERSION     DASWGA010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3258
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1769275"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..568
                     /locus_tag="VF991_23055"
     CDS             <1..568
                     /locus_tag="VF991_23055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HEX9559389.1"
                     /translation="TPQTSYGAQKSIGEFLMRDYTRKGFLRGTSVRLPTICVRTGLPN
                     KAASTWASSVVREPLTGVDVVCPVKPATIMVVLSPRKTVEAFLRLHDLPPDALGPSRT
                     LLLNGINVTARELEQAVGRHAGNRKVGKVVWQHDPAIQKICDGWPQGIDSKRARALGF
                     ETDKDLDEIVHNFIADDLDDQMKIAKAA"
     gene            complement(598..1449)
                     /locus_tag="VF991_23060"
     CDS             complement(598..1449)
                     /locus_tag="VF991_23060"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9559390.1"
                     /translation="MLSWEKIDAIPGWFMFQSYCVWRALLDQQARVPGDLFEIGVWRG
                     RSASVLASYRKGDEKLYLCDLRLDEEAVHRAIRSVGAEPVNIVPLSGPSADLPAKLDL
                     QAMHQTVRWFHIDGEHTGTAVYRELEFANRIVNADGIVVIDDFFSPRYAANTTEVIRY
                     LEKNPFHFRLLAVGFNKGYLCRPESLPRYMDFMASGMSRALSTYGAKTTLFKTTGPWD
                     TDAVGITDYVDDAGPIAGPDNEPQRWHMMRTRHVWGPWRHLQNGWRMLRGRVVKRTAG
                     VPPAHDC"
     gene            1557..2906
                     /locus_tag="VF991_23065"
     CDS             1557..2906
                     /locus_tag="VF991_23065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559391.1"
                     /translation="MPTTTVAYRTTVCLIWALALWHSWESRGLFVDGSAFLVQIARRG
                     WFFDFYGPRLYAMVVGQIPVITGLFLGVTDLHLLARLLSIGLFALPTALYHLALVRVK
                     DDAVMLAAVIATIAVVFMTTSFFIVGEYNTAYAIAIVVAVRLATAKHLTVADGLFLAV
                     IGLLAVRTYEAMLYLGPVLAAMIVWAVWRAPSRPWLATGLHLLSATGFLAGMVVAIGS
                     LTRPYSEGHLEETIQTASNFWQNLQFDLALSAALVVVLWALIRPRDLLGGKPYRWAGV
                     CLLLLALSPLLVLSDTLVRPLAKSQYVARTAAGLVVGAIVIFIWAYASTLRGKLPAFV
                     VLGSPAAAQRFAGFALVLLLAVLPSDIYLTRNWTLYLEAVRSTVRGHDGVIAFEDSPL
                     AKHPFDLLVEAWILPSQSLALRAKRGDGIIAPPKEFNAWQPFPPAEPYPLGQYVWRD"
     gene            2908..>3258
                     /locus_tag="VF991_23070"
     CDS             2908..>3258
                     /locus_tag="VF991_23070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559392.1"
                     /translation="MRALSQAAAYRGVVLLLWVLAAYGTATCRGLFWDGSSFLVNILD
                     RGWFHDFYGARSHVDWLTQAPVLALSELGVRDTRLLAMVYSATLFGLPTALYHLALAR
                     VRDDAVLLGIVIAVI"
BASE COUNT          464 a         1112 c         1071 g          611 t
ORIGIN      
        1 cacgccgcag acctcgtacg gcgcccagaa gtcgatcggc gaattcctga tgcgcgacta
       61 tacccgcaag ggatttttac gcggcacctc ggtgcggctg ccgacgatct gcgtgcgcac
      121 cggcctgccc aacaaggcgg cctcgacctg ggcgagttcg gtggtgcgcg agcccctgac
      181 cggcgtcgac gtcgtctgcc cggtgaagcc tgcgaccatc atggtggtgc tgagcccgcg
      241 caagacggtc gaagccttcc tgcgcctgca cgacctgccg cccgacgccc tcggtccgag
      301 ccgcacgctg ctgctgaacg gcatcaacgt caccgcccgc gagctcgagc aggcggtcgg
      361 ccgccatgcc ggcaatcgca aggtcggcaa ggtggtctgg cagcacgacc cggcgatcca
      421 gaagatctgc gacggctggc cccagggcat cgattccaag cgggcccggg ctcttggctt
      481 cgagaccgac aaggacctcg acgagatcgt gcacaacttc atcgccgacg accttgacga
      541 tcagatgaag attgccaagg cggcgtagtc ttccggaccg cgggcgtctc gcccgcctca
      601 acaatcatga gcgggcggga cgcccgcggt ccgcttgact acccgccccc gcagcatccg
      661 ccagccgttc tgcaggtggc gccagggccc ccagacatga cgggtgcgca tcatgtgcca
      721 gcgctgcggc tcgttgtcgg ggccggcgat cgggccggcg tcgtcgacat agtcggtgat
      781 gccgaccgcg tcggtgtccc acgggccggt ggtcttgaag agcgtggtct tggcgccgta
      841 ggtcgaaagc gcgcgactca tgcccgaggc catgaagtcc atgtagcgcg gcaggctctc
      901 gggccggcag agatagccct tgttgaagcc gacggcgagc aggcggaaat ggaacgggtt
      961 cttctcgagg tagcggatca cctcggtggt gttggccgcg tagcgcggcg agaagaagtc
     1021 gtcgatcacc acgatgccgt cggcattgac gatgcggttg gcgaattcga gctcgcgata
     1081 gaccgcggtg ccggtgtgct cgccgtcgat gtggaaccag cgcacggtct ggtgcatggc
     1141 ctggaggtcg agcttggccg gcaggtcggc cgacgggccc gacagcggca cgatgttgac
     1201 gggctcagct ccgaccgagc ggatggcgcg gtgcaccgcc tcctcgtcga gccgcagatc
     1261 gcacagatag agcttctcgt cgcccttgcg gtaggaagcc agcaccgagg ccgagcggcc
     1321 gcgccacacg ccgatctcga acaggtcgcc gggcacccgg gcctgctggt cgagcagggc
     1381 gcgccagacg cagtaggact ggaacatgaa ccagcccgga atggcgtcga ttttttccca
     1441 actgagcatc acaggtcctc gcttggcgag gccttgctaa cagcgccttt tcgacgctgc
     1501 aagccgtgac cgcttgcgtc cccggcgacg gtcctgtaga gcccgcacgc ttgcgcatgc
     1561 caacgacaac agtcgcctac cgaacgacag tctgcctgat ctgggcgctg gcactctggc
     1621 acagctggga gagccggggt ctttttgtcg acggctcggc attcctcgtg cagatcgccc
     1681 gtcgcggctg gttcttcgac ttctacgggc cacgcctcta cgccatggtc gtcggccaga
     1741 tcccggtcat caccggcttg ttcctgggcg tcaccgacct gcatctcctg gcccgcctgc
     1801 tgtcgatcgg cctgtttgcc ctaccgaccg cgctctatca cctggcgctg gtgcgggtga
     1861 aggacgacgc cgtgatgctc gccgccgtga tcgccaccat cgccgtggtg ttcatgacga
     1921 cctctttttt catcgtcggc gaatacaaca ccgcctacgc catcgccatc gtcgtcgcgg
     1981 tccggctcgc cacggccaag cacctgactg tggccgacgg cctgttcctg gccgtcatcg
     2041 ggctgctggc ggtgcggacc tacgaagcga tgctctatct cggtccggtg ctggcggcca
     2101 tgatcgtctg ggcggtctgg cgtgcgccgt cgcggccctg gcttgccacg ggcctgcacc
     2161 ttttgtcggc gacgggcttc ctggccggca tggtcgtcgc catcggctcg ctgacgcggc
     2221 cctattcgga gggccatctc gaggagacga tccagaccgc ctcgaacttc tggcagaatc
     2281 ttcagttcga cttggcactg tcagccgcgc tcgtcgtggt gctgtgggcg ctgatccggc
     2341 cgcgcgatct cttgggcggt aagccttacc gctgggctgg cgtgtgcctt ctccttcttg
     2401 cgctctcgcc gttgctggtg ctgagcgaca ccctggtgag accgctcgcc aagtcgcagt
     2461 acgtggcgcg cacggcggcc ggcctggtcg tcggcgccat cgtgattttc atctgggcct
     2521 acgcctcgac gctgcgcggc aagctgcccg ccttcgttgt cctgggctcg cccgcggcgg
     2581 cgcagcgttt cgccggcttc gccctggtgc tgctgctggc ggtcctgccg tcggacatct
     2641 acctgacgcg gaactggacg ctgtatctgg aggccgtgcg cagcacggtg cgcggccatg
     2701 acggcgtgat cgccttcgag gactcaccgc ttgccaagca tcccttcgat cttctggtcg
     2761 aagcctggat cctgcccagt cagagcctgg cgctacgcgc caagcggggc gacggcatca
     2821 tcgcgccgcc caaggaattc aacgcctggc agccgttccc gccggcggag ccataccccc
     2881 tcggtcaata cgtctggcgc gactagcgtg cgcgcgctgt cccaggccgc tgcctatcga
     2941 ggcgtcgtcc tgctgctctg ggtcctggct gcctacggca ccgccacttg ccgcggcctg
     3001 ttctgggacg gctcgtcctt cctggtgaac atcctcgatc ggggctggtt tcatgatttc
     3061 tatggcgccc gttcgcacgt cgattggctg acgcaggcgc cggtgctggc cctgtccgag
     3121 cttggcgtgc gcgataccag gctgctggcc atggtctact cggcgaccct cttcggcctg
     3181 ccgacggcgc tctatcatct ggcgctggca cgggtgcgcg acgacgccgt gctgctcggc
     3241 atcgtcatcg ccgtgatc
//
LOCUS       DASWGA010001009         5301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_240282, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001009 DASWGA010000000
VERSION     DASWGA010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5301
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240282"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VF991_23075"
     CDS             complement(<1..224)
                     /locus_tag="VF991_23075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559393.1"
                     /translation="MTLRSALADAFFFVAFRSFVAAVLMRVVLIAGVFILVFANHASA
                     QDSLLTRFLGNFFNDSQDIPNSPWPYNSGPP"
     gene            541..2406
                     /locus_tag="VF991_23080"
     CDS             541..2406
                     /locus_tag="VF991_23080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HEX9559394.1"
                     /translation="MERKRSAALTLAALGVVFGDIGTSPLYTVKECFSEFTGILPTHD
                     DVLGILSLITWALIIVVTLKYVVVVMRADNRGEGGVLALMALVSRQEAISERRRRIYL
                     MIGVAGAALFYGDCLLTPAISVLSAVEGLKVATPALQPLVVPIALGVLVALFAVQKFG
                     TAGVGRWFGPITLLWFIVLLGLGLRQIVEAPQVLSAFSPHHALQFCLRHGFVAFLALG
                     AVTLAVTGAEALYADMGHFGREPIRRAWLWLVLPSLLANYYGQGALLLTDDSALENPF
                     FRLAPEWALYPMVALATMATVIASQATISGAFSMAQQAALLGLSPRVRVLHTSASEFG
                     QIYLPAVNWLLLVGVVALVMSFKSSTNLAAAYGIAVTGTMLVTTVLVFVLAVRGWKWR
                     LALAVPVFVGFLLVDATLFSANMLKFLDGGWVPLAIAAVIFAAMWTWLQGRLAVAARE
                     KEESLPIESLLGSIGPGRVHRPQGTAVYLTAFSGNAPNCLLHNLKHNEVFHEHVVLLT
                     VEVPDEPFMAADHRATIIHLGKGVHRVVLRYGFMEQPDVPRDLAGLADKGIPTDPMRT
                     SYFIGRNTFVGAARPLLPRWQQKLFLSLSRIAASAGDFFGLPANRVVELGSRIEI"
     gene            2571..3821
                     /locus_tag="VF991_23085"
     CDS             2571..3821
                     /locus_tag="VF991_23085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559395.1"
                     /translation="MGDRPTLIMTTRLGVRPLGVRGDPLHAVAGQLLAVIRRRLGDGP
                     ADLLAEPQLRETGDGIDWYAARTGPVRRLADLDESARTQVLRTVESHLESIRSLGGQL
                     KSSASSDEAHLIGRSLELATARPSDDFIYVVDGQPVIAAWGYEADAAAGLQSFAPPAV
                     PIPTRASPMLASAPAILATRLGWAPWLSALLFGLLLLLLLLITSWLLRACSPVDPTLN
                     LAMLETPAPPAPEPPPDPTPVLKASLDDAQAEENKLKVQLAALQTDLKDKLAHCKPIE
                     PPKPPPPPPPLQAAKPPPPPPPPPQQHAAVPQAPPISRPPPGQLPCNWSGDSGGEGVT
                     RNRHYLGDKPGFVGINYNLYVKPDDIKVIYRGQVLAGTGGPRSGRGGFGFDWKPVAGD
                     YSVDVVVTGEMWGTRWTYAMVCPR"
     gene            3828..>5301
                     /locus_tag="VF991_23090"
     CDS             3828..>5301
                     /locus_tag="VF991_23090"
                     /inference="COORDINATES: protein motif:HMM:NF040486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SrfA family protein"
                     /protein_id="HEX9559396.1"
                     /translation="MAAGPLLVSEPLQRYRALGMAGDPVWRAAGQLRTAITQRLSRRH
                     ADLLAIPEVDPTGRRIDWYAPVEGEVRKFADLSEAERGAVLNDVQRLHGDIAELADSM
                     DAVERSTAERNFARLLRHALTAPGEDTLYVVDGKPVMTFWGFATDAALPGVFLASPPA
                     TPGLTPRPALRARPIPEAVLASAPAVAAAGATRSAWWQWLLLGVLLLSLLALLAWLVR
                     PYLPHLEPYLEAEARDRALSLAVRQPLELQQTRVSTLQQDNEHLRLELARLTDELARR
                     GGDCAAGIVVPGGVVVGGAPIERSAAPDMPGGADVNVAGKDIGKDAGKEGAKDAGKDA
                     GKDGGKDQGKGPDDKTVDKGNVKGPDPQDKNNNKDKHAAAKDEPKPMVVPPEAKQKQD
                     VAFLKGDWRSRTGLATATGERDLRPSYTLDDKGKGKVSFVQKNGTTCEAPAEARWDGA
                     KLVIEEKANPKCADGRTYARNVVNCEVGADGVAQCNGSQPG"
BASE COUNT          881 a         1833 c         1742 g          845 t
ORIGIN      
        1 ggcgggccgc tgttgtaggg ccagggcgag ttcgggatgt cctgcgagtc gttgaagaag
       61 ttgcccagga atcgcgtcaa caagctgtcc tgcgcagaag catggttggc gaagaccagg
      121 atgaagacgc cggcaatcag cacaacgcgc atcagtactg ctgcaacgaa cgaacggaac
      181 gcgacgaaga agaacgcgtc cgcaagcgcc gaacgaagtg tcacgatatc ccccacaaaa
      241 gccgaatcag gctgacttct tgcgtatcgc gttgccggat ttgagttcca tgcggatggc
      301 ggttccaccg catacgagac gcattactta tgaaacggcc gtcggacgcg acgcctgcgt
      361 cgagaggatc tgaaaaatca agcggagaaa cacagaaaaa cgtcgattcc gcgcgccaaa
      421 aacccattga ccgcgtgccc tcggggcgca agaaccgcga gccaatcggg ccgttgccgg
      481 actcggcaag agacagtacg gcggtacaaa tagatgtccg gggacgcaac aacactaccg
      541 atggagcgca agcgctcggc agccctcaca ctggccgcac tgggcgtcgt attcggcgac
      601 atcggcacca gcccgctcta caccgtcaag gaatgtttca gcgagttcac cggcatcctg
      661 ccgacgcacg acgacgtgct cggcatcctg tcgctgatca cctgggcgct gatcatcgtc
      721 gtcactctga agtatgtcgt cgtggtgatg cgggcggaca accgcggcga aggcggcgtg
      781 ctcgccctga tggcgctggt gtcgcgccag gaggcgatct ccgagcgccg tcgccgtatc
      841 tacctgatga tcggcgtggc cggcgccgcg ctgttctatg gcgactgcct gctgacgccc
      901 gccatctcgg tgctgagcgc ggtcgagggc ctcaaggtcg cgacgccggc cttgcagccg
      961 ctggtggtgc cgatcgcgct cggcgtcctg gtggcgctgt tcgccgttca aaagttcggc
     1021 accgctggcg tcggcaggtg gttcggtccg atcacgcttc tgtggttcat cgtgctgttg
     1081 ggattggggt tgcgccagat cgtcgaggca ccgcaagtcc tgtcagcctt ctcgccgcat
     1141 cacgccctgc aattttgcct gcgccacggc ttcgtcgcct tcctcgcgct gggcgccgtg
     1201 accctcgccg tgaccggtgc cgaggcgctc tatgccgaca tgggccattt cggccgcgag
     1261 cccatccgac gcgcctggct gtggctggtg ctgccgtcgc tcctcgccaa ctattacggt
     1321 cagggcgcgc tgttgctgac cgacgacagc gcgctcgaga acccgttttt ccgtctcgcg
     1381 ccggagtggg cgctctatcc gatggtggcg ctcgccacca tggcgaccgt gatcgcctcg
     1441 caggccacca tctccggcgc cttttcaatg gcgcagcaag ccgccctgct cgggttgagt
     1501 ccgcgcgtgc gcgtcctgca cacttcggcg agcgaattcg gccagatcta cctgccggcg
     1561 gtcaactggc tgctcctggt cggcgtggtg gcgctggtga tgtccttcaa gtcgtcgacc
     1621 aatctcgcgg cggcctatgg catcgccgtc accggcacca tgctggtcac cacggtgctg
     1681 gtgttcgtgc tcgcggtgcg cggctggaaa tggcgcttgg cgctggcggt cccggtgttc
     1741 gtcggcttcc tgctggtcga cgcgacgctg ttctccgcca acatgctgaa gttcctcgac
     1801 ggcggctggg tgccgcttgc catcgccgcg gtgatcttcg cggcgatgtg gacctggctg
     1861 cagggccgcc ttgccgtcgc agcgcgcgag aaggaggagt cgctgcccat cgagtccctg
     1921 ctcggtagca tcggccccgg ccgcgtccat cgcccgcaag gcacggccgt ctacctgacg
     1981 gcgttctccg gcaatgcacc caactgcctg ctgcacaacc tcaagcacaa cgaggtcttc
     2041 cacgagcacg tggtgctgct gaccgtcgag gtgccggatg agcccttcat ggcggcggac
     2101 caccgcgcca ccatcatcca tctcggcaag ggcgtgcatc gcgtggtgct gcgctacggt
     2161 ttcatggagc agcccgacgt gccgcgcgac ctcgccggcc tggccgacaa gggcataccg
     2221 accgatccga tgcgcacctc ctacttcatc ggccgcaaca ctttcgtcgg cgccgcccgg
     2281 ccgctgctgc cgcgctggca gcagaagctg ttcctcagcc tgtcgcgcat cgccgccagc
     2341 gccggcgact tcttcggcct gccggccaac cgcgtcgtcg aactcggcag ccgcatcgag
     2401 atctagcggt tttcgcggcg gcgtgtgtac cgcatatgcg attgcgaggc aattgcaatc
     2461 caaaaggcgc aagccggcac cgcgaaacat cgcgaaatca cacccgaatc gaacataaac
     2521 ccgccggatt cgctggatga tatgatgtcc taggagacaa tcggcatcat atgggcgacc
     2581 gccccaccct gatcatgacc acgcggctcg gcgtgcggcc gttgggcgtg cgcggcgatc
     2641 cgttgcacgc cgtcgccggc cagctgctgg cggtaatccg ccgccgtctg ggcgacggcc
     2701 cggccgacct tttagctgaa ccgcagttgc gcgagacggg cgacgggatc gactggtacg
     2761 ccgcgcggac aggcccggtg cgccgactgg ccgatctcga cgagagcgcg cgcacccaag
     2821 tgctgcgcac cgtcgaaagc catctcgaat ccatccgctc gctgggcggg cagctgaaga
     2881 gctcggcgag cagcgacgaa gcccacctga tcggccgctc gctggaactc gccaccgcac
     2941 ggccttccga cgatttcatc tacgtggtcg atggccagcc ggtgatcgcc gcctggggct
     3001 acgaggccga tgccgccgcg ggcctgcaga gcttcgcgcc gccagcggtg ccgatcccga
     3061 cacgagcgtc gccgatgttg gccagcgcgc ccgccatcct ggcgacgcgc ctgggctggg
     3121 cgccgtggct gagcgccctg ctgttcggcc tccttctcct tctgctgctg ctgatcacgt
     3181 cgtggttgtt gcgcgcctgc tcgccggtcg atccgaccct gaacctcgcc atgctggaaa
     3241 cgccggcgcc gcccgcgccc gagccgccgc ccgatccgac gccggtgctg aaggcctcgc
     3301 tcgacgacgc gcaggccgag gagaacaagc tcaaagtcca actcgccgcg ctgcagaccg
     3361 atctcaagga caagcttgcc cactgcaagc cgatcgagcc gcccaagccg ccgcccccgc
     3421 caccgccgct acaggcggcc aagccaccgc ctccgccgcc gccgccacca cagcagcacg
     3481 ccgccgtgcc ccaggcgccg ccgatcagcc gtcccccgcc gggccagttg ccgtgcaact
     3541 ggtcgggcga ttcgggtggc gagggtgtga cgcgcaaccg acactatctg ggcgacaaac
     3601 ccggattcgt gggcatcaac tacaacctgt atgtaaagcc ggacgacatc aaagtgatct
     3661 atcgcggcca ggtgctagcc ggcaccggcg ggccgcgcag cggccgcggc ggcttcggct
     3721 tcgactggaa gccggtcgct ggggattatt cggtcgacgt cgtcgtaaca ggtgaaatgt
     3781 ggggcacccg atggacgtac gccatggtct gcccgcggta aggaacgatg gccgcaggtc
     3841 ctcttctcgt cagtgaaccg ctgcagcgct atcgcgcgct aggcatggcg ggcgatcccg
     3901 tgtggcgtgc cgccggccaa ctgcgcacgg cgatcaccca gcgcctgtcg cgccggcatg
     3961 ccgatctttt ggctatcccc gaagtcgatc cgactggccg acgcatcgat tggtacgccc
     4021 ccgtcgaggg cgaggtgcgc aaattcgccg acttgagcga ggccgaacgc ggcgccgtgc
     4081 tgaacgacgt ccagcgcctg cacggcgaca tcgcggagct cgccgattcg atggacgccg
     4141 tggagcgttc gaccgccgag cgcaactttg cccgcctgct gcgccatgcg ctgaccgcgc
     4201 cgggcgagga cacgctctac gtcgtcgacg gcaagccggt catgacgttc tggggtttcg
     4261 ccaccgacgc cgcgctgccc ggcgtgttcc tggcaagccc gccggcaacg cctggcctga
     4321 cgccgcgccc cgccttgcgg gctcggccga ttcccgaagc ggtgctcgcc tccgcgcccg
     4381 ccgtcgccgc agccggcgcc acgcgctcgg cgtggtggca atggctgctg ctcggcgtgc
     4441 tgctgctgtc gttgctggcg ctgctcgcct ggctggtgcg gccatatttg ccgcatctcg
     4501 aaccctatct cgaggccgag gcgcgcgacc gcgccctcag tctcgccgtg cgccagccgc
     4561 tcgagctgca gcagacgcgc gtcagcacgc tgcaacagga caacgagcat ctgcgcctcg
     4621 agctggcgcg cctcaccgac gagctggcgc gccgcggcgg cgactgcgcg gcgggcatcg
     4681 tcgtgccggg cggcgtggtg gtgggcggcg cgccgatcga acgcagcgcg gcacccgata
     4741 tgccgggcgg cgccgacgtc aacgtcgccg gcaaggacat cggcaaagac gccggcaaag
     4801 agggcgccaa ggacgctggc aaggacgctg gcaaggacgg cggcaaggat cagggcaaag
     4861 gcccggacga caagactgtc gacaagggca acgtcaaagg acccgatccg caggacaaga
     4921 acaacaacaa ggacaagcac gccgcggcca aggacgagcc caagccgatg gtcgtgccgc
     4981 ccgaggccaa gcagaaacag gacgtcgcct tcctgaaggg agactggcgc tcgcgcaccg
     5041 gcctcgccac agcgaccggc gagcgcgatc tcaggccctc ctacacgctg gatgacaagg
     5101 gcaagggcaa ggtctcgttc gtgcagaaga acggcacgac ctgcgaggcg ccggccgagg
     5161 cgcgctggga cggcgccaag ctcgtgatcg aggagaaagc caatcccaag tgcgccgacg
     5221 ggcgcaccta tgcgcgcaac gtcgtgaact gcgaggtcgg cgccgatggc gtggcccagt
     5281 gcaatggcag ccagcccggc g
//
LOCUS       DASWGA010001010         7639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1377846, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001010 DASWGA010000000
VERSION     DASWGA010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 7639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7639
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1377846"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1945
                     /locus_tag="VF991_23095"
     CDS             <1..1945
                     /locus_tag="VF991_23095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HEX9559397.1"
                     /translation="RDPDKLVDIIAALEPTFGGINLEDIKAPECFHVEQKLRERLSIP
                     VFHDDQHGTAIIVGAAVLNGLALVGKDISKVKLVASGAGAAALSCLGLLEKLGLPREN
                     MWVTDIKGVVWKGRNELMDPWKERYARDTPARTLAEVIGGADVFLGLSAAGVLKREMV
                     AKMAAAPLIFALANPDPEIAPEDVLAVRDDAIMATGRSDYPNQVNNVLCFPYIFRGAL
                     DVGARTVNDDMKIACVRALATLARKEPSEVVARAFGEQAGGFGPNQIIPKPFDPRLIV
                     ELAPAVAKAAMDSGVASRPIVDFDAYRQQLSQFVFKSGLIMRPLFEQARSTPMRVIFS
                     AGEDDRVLRAAQIILDEGIAQPILIGRPEIMRRRAERLGLRFRPGIDAALVDPSDDPR
                     YDRYWGAYHQLMERRGVTEPTARNLVRSSPTLIAALAVRLGDADAMIAGAYGRFRTHF
                     NHVRDVIGTREGVKNMAGLSLLVMPTRSLFIADTYVNQDPDPEMLVEITLLAADEVLR
                     FGIQPRVALISHSSFGSSDHPSARKMAMAVKMLHERAPALEVDGEMHGDAALDPDIRR
                     NVFPRSRLKVAANLVVCPSLDTANVSFNLLKTAADGLHVGPILLGTALPAHVLTPSVT
                     ARGILNMTALAAVEAQRLAEARG"
     gene            1942..3306
                     /gene="mgtE"
                     /locus_tag="VF991_23100"
     CDS             1942..3306
                     /gene="mgtE"
                     /locus_tag="VF991_23100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEX9559398.1"
                     /translation="MNGGEPDVLDEVTPDLVRRVEAALAEDKAEEVRTLLAKLSATGQ
                     ASILEQVSEPERDRLVGILKRDLDPEALIELDEEVLEDVLDQLDSKEIAAAARELETD
                     DAATILEDLPEEERREVLAELPAAERAEIESALAYPEDTAGRLMQRSLVKVLDDWTVG
                     QVIDHCREATDLPEDVYDIFVVDAAGKLRGSVPLGRMLRAKRPVPVLDIVDPDIPSVP
                     ATTDQNEVAHLFRDQNLVSCPVVDSDRRLLGVIMVDDIVDVIDEEAEEDLLKMGGVGI
                     DDMHANPVRTARLRAVWLTVNLATAVLASFVIGQFEGAIEKIVALAVLMPIVASMGGN
                     AGTQTVTVAVRALAMGELTAANALRFVAKEAAVGGLNGLIFALVMGAAVVGWYGDWRL
                     GAVIGAAMICNLLAAALAGTLIPLGLQKFGIDPAVSSTVFLTTVTDVIGFLAFLGLAT
                     AFLL"
     gene            3376..3819
                     /locus_tag="VF991_23105"
     CDS             3376..3819
                     /locus_tag="VF991_23105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559399.1"
                     /translation="MSVIARLMGMLVLLLALSAAQAQNKVPSERALETLVKTSLLSFN
                     DANMTGNYTVLHAKLSKQFREQFPPERLKETFKEFSDKRIDIDVVATYGPAYTATPAI
                     DAEGKLVVKGFFPTEPVRVNFELDFIPSDGDWKLIRIHVKVGSPS"
     gene            3851..5023
                     /locus_tag="VF991_23110"
     CDS             3851..5023
                     /locus_tag="VF991_23110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HEX9559400.1"
                     /translation="MIPNSMPPFDFGLGETAEALREQVQRFASAEVAPIAAELDKTDR
                     FPRELWPKMGELGLHGITVEEEYGGSGLGYLEHVVAVEELSRASAAVGLSYGAHSNLC
                     VNQIRRNGSDEQKRRFLPKLISGEHVGSLAMSESGAGSDVVSMKLRADKKGDRYVLNG
                     TKMWITNSPDAQVVVVYAKTDPGAGARGITTFIVETHAKGFKVAQKLDKMGMRGSSTG
                     ELVFEDCEIPAENVLGAVGKGVNILMSGLDYERAVLAAGPLGIMQSAMDIVVPYVHER
                     RQFGQAIGEFQLVQGKLADMYTTMNACKAYVYAVAKACDRGQTTRKDSAGAILYAAEK
                     ATMVALDAIQLLGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFAESA"
     gene            5112..5750
                     /locus_tag="VF991_23115"
     CDS             5112..5750
                     /locus_tag="VF991_23115"
                     /inference="COORDINATES: protein motif:HMM:NF024701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9559401.1"
                     /translation="MPRYLTDQDIADFRAELCRVATERFARFGYEGVTMRQLAEALGC
                     SPKTPYRYFKDKADILATVRAQAFTKFADALEAAAATAGDPIERARRVGEAYHRFALK
                     NWHEYRIMFDIDAPLDENHPDLGPQAHRAAGYITQQAEELAKAGLIAVDPKLFGWSMW
                     AATHGLVMLQHAGMLEHAPDYRTLADFHGLLMLKGAGGPARTRPAKKAGKKR"
     gene            5747..7294
                     /locus_tag="VF991_23120"
     CDS             5747..7294
                     /locus_tag="VF991_23120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEX9559402.1"
                     /translation="MTAGATAGITAGERFRSWADIQGNAARAAGGFASLGVGEDDCVA
                     LMVRNDLATFEANMAGGQLGAYAVPINWHFTPEEAGYILSDCAAKVLVAHSDLLAQIA
                     SGVPAGVKVLVVPTPEEIATAYNVPAEKRRAPVGSETWHAFVARSAPNTEPAKASRGS
                     MIYTSGTTGRPKGVRRQPSSPEMQAAAAREVARYWGLEADPSTVVLMNGPMYHSAPAA
                     YGMGSARLGLHMVLQPRFDAEEMLRLIEKHRVSHMHIVPTMFVRLLRLPEEVRRRYDV
                     SSLRWITHGAAPCAPAVKRQMIDWWGPVITEYYGATETGVVVWHDSQEALRKPGTVGH
                     VVEGGILRVVDDQGRDVKQGEVGEIYLRGPLLNDFTYNNDDAKRREIALGDLVTVGDV
                     GYQDADGYVFLCDRKRDMIISGGVNIYPAEIESVLIQMPGVRDCAVFGIPDEEFGEQI
                     CAYVEPQAGVTPDAAQVRGYLAQHLARYKVPKVVEFSAALPREDSGKIFKRKLRAPYW
                     ANTGRSI"
     gene            7303..>7639
                     /locus_tag="VF991_23125"
     CDS             7303..>7639
                     /locus_tag="VF991_23125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX9559403.1"
                     /translation="MSDDEVILSGEIRNKLVDSKQKWAENGRLLTGKTAAPSQRLPPR
                     QRRVETWPMLDLGIQPEIPSHAWRLFVDGEVEQPTTWKWGEFTDLPKTTLTTDIHCVT
                     AWSRYDNTWQ"
BASE COUNT         1305 a         2561 c         2571 g         1202 t
ORIGIN      
        1 gcgcgacccg gacaagctgg tcgacatcat cgccgccctc gagccgactt tcggcggcat
       61 caacctcgag gacatcaagg cgccggagtg cttccacgtc gagcagaagc tgcgcgagcg
      121 cctgtcgatt ccggtgttcc acgacgacca gcacggcacc gcgatcatcg tcggcgcggc
      181 ggttctcaac gggctggcgc tggtcggcaa ggacatctcg aaggtcaagc tcgtcgcctc
      241 cggggcgggg gcggccgccc tgtcgtgcct gggcctgctc gagaagctcg gcctgccgcg
      301 cgagaacatg tgggtcaccg acatcaaggg cgtggtgtgg aagggccgca acgagttgat
      361 ggacccgtgg aaggagcgct acgcgcgcga caccccggcg cggactctcg ccgaggtgat
      421 cggcggcgcc gatgtgttcc tgggcctctc ggccgccggc gtgctcaagc gcgagatggt
      481 ggccaagatg gcggccgcgc cgctcatttt cgcgctcgcc aatcccgatc ccgagatcgc
      541 gccggaagac gtgttggcgg tccgcgacga cgccatcatg gcgaccgggc gcagcgacta
      601 tcccaaccag gtcaacaacg tcctctgctt tccctatatc ttccgcggcg cgctggacgt
      661 cggcgccagg acggtcaacg acgacatgaa gatcgcctgc gtgcgcgccc tggccacgct
      721 ggcgcgcaag gaaccgtccg aggtcgtggc ccgcgctttc ggcgagcagg ccggcggctt
      781 cggtccgaac cagatcatcc ccaagccgtt cgacccgcgc ctgatcgtcg agctggcgcc
      841 ggcggtggcc aaggccgcca tggactcggg cgtggcgagc cggccgatcg tcgatttcga
      901 cgcttatcgc cagcagctca gccagttcgt cttcaagtca ggcctgatca tgcggccgct
      961 gttcgagcag gcccgcagca cgcctatgcg ggtgatcttc agcgccggcg aggatgaccg
     1021 cgtgttgcgg gcggcgcaga tcattctcga cgagggcatc gcccagccga tcctgatcgg
     1081 ccggcccgag atcatgcggc ggcgcgccga gcgcctgggc ttgcgcttcc ggcccggcat
     1141 cgatgccgcc ctggtcgatc cctccgacga tccgcgctac gaccgctact ggggcgccta
     1201 ccaccaactg atggaacggc gcggcgtcac cgagcccacg gcgcgcaacc tggtgcgctc
     1261 cagcccgacc ctgatcgcag cactcgcggt gcggctgggc gacgccgacg ccatgatcgc
     1321 cggcgcctac ggccgcttcc gcactcactt caaccacgtg cgcgacgtga tcggcacgcg
     1381 cgagggcgtg aagaacatgg cggggctcag cctgctggtc atgccgacgc gctcgctgtt
     1441 catcgccgac acctatgtca atcaggaccc cgatcccgag atgctggtcg agatcaccct
     1501 gctggcagcc gacgaggtgt tgcgcttcgg catccagccc agggtggcgc tgatctcgca
     1561 ttcgagcttc ggcagctccg accatccctc ggcgcgcaag atggcgatgg cggtgaagat
     1621 gctgcacgag cgggcgccgg cgctcgaagt cgacggcgag atgcatggcg atgccgcgct
     1681 cgatcccgac atccgtcgca acgtcttccc gcgctcgcgc ctgaaggtgg ccgccaacct
     1741 ggtggtctgc ccgtccctcg acaccgccaa cgtctcgttc aacctgctca agacggcggc
     1801 cgacgggctg catgtcggcc cgatcctgct cggcaccgca ctgccggcgc acgttctcac
     1861 gccgtcggtg accgcccgcg gcatcctgaa catgacggcg ctggccgccg tcgaagccca
     1921 acggctggcc gaggcgcggg gatgaacggc ggcgagcccg atgttctcga cgaggtgacg
     1981 ccggacctgg tccggcgcgt cgaggcagca ctcgccgagg acaaggccga agaggtcagg
     2041 acgctgctcg cgaagctcag cgccactggc caggcctcga tcctcgagca ggtctccgag
     2101 cccgagcgcg acaggctggt cggcatcctc aagcgcgatc tcgatcccga agcgctgatc
     2161 gaactggacg aggaagtcct cgaggacgtc ctcgaccagc tcgacagcaa ggaaatcgcc
     2221 gcggcagccc gcgaactgga gaccgacgac gcggcgacca tcctcgagga tctgcccgag
     2281 gaggaacgcc gcgaggtttt ggccgagttg ccggccgccg agcgtgccga gatcgaaagc
     2341 gcgctcgcct accctgagga caccgcgggc cggctgatgc agcgctcgct ggtcaaggtg
     2401 ctggacgact ggacggtcgg ccaggtgatc gaccattgcc gcgaggcgac cgacctgccg
     2461 gaggatgttt acgacatctt cgtcgtcgat gccgccggca aactgcgcgg ttcggtgccg
     2521 ctcggccgca tgctgcgcgc caagcggccg gtgcccgtcc tcgatatcgt cgaccccgac
     2581 attccctcgg tgccggcaac caccgaccag aacgaggtgg cgcatctttt ccgcgaccag
     2641 aacctcgtgt catgcccggt cgtcgattcc gaccgccgcc tgctcggcgt gatcatggtc
     2701 gacgatatcg tcgacgtgat cgacgaggag gccgaggagg acctcttgaa gatgggcggc
     2761 gtcggcatcg acgacatgca cgccaacccg gtgcggaccg cgcgcctgcg cgccgtatgg
     2821 ttgacggtga acctcgcgac cgcggtgctg gcatccttcg tgatcggcca gttcgagggg
     2881 gcgatcgaga agatcgtggc gctggccgtg ctgatgccga tcgtggcctc gatgggcggc
     2941 aatgccggta cgcaaaccgt gactgtggcc gtgcgcgccc tcgccatggg tgagctgacg
     3001 gcggccaatg cgctccgctt cgtcgccaag gaggccgctg tcggcgggtt gaacggcctg
     3061 atcttcgccc tggtcatggg ggcggcggtg gtcggctggt acggcgactg gcggctgggc
     3121 gcggtgatcg gcgccgcgat gatctgcaat cttttggcgg cggcgctcgc cggcacgctg
     3181 atcccgctcg ggctgcagaa attcggcatc gacccggcgg tatcatcgac ggtgttcctg
     3241 acgacggtca ccgacgtgat cggcttcctc gcctttctcg ggctggcgac ggcgttcctg
     3301 ctctgagggg catgatcgcg tgcagcttcg catcgacgct ccgccggggt atcgtgccgc
     3361 cagtgaggac gctcgatgtc ggtgatcgcc cgcctgatgg gtatgctcgt tctgctgctg
     3421 gccctgtcgg ccgcgcaggc gcagaacaag gttccgtcgg agcgcgcgct cgagaccctg
     3481 gtcaagacgt cgctgctgtc gttcaacgac gccaatatga ccggcaacta cacggtcttg
     3541 cacgccaagc tctccaagca gttccgcgag cagttcccgc cggagcggct caaggagacg
     3601 ttcaaggagt tcagcgacaa gcgcatcgat atcgacgtcg tggcgacgta cgggccggcc
     3661 tatacggcga cgccggcgat cgatgccgaa ggcaagctgg tggtcaaggg cttcttcccg
     3721 accgagccgg tacgagtcaa cttcgagctc gacttcattc cctccgacgg tgactggaag
     3781 ctgatccgca tccacgtcaa ggtgggctcg ccatcgtgat cccaccctca gcaacggaca
     3841 agaccgcctc atgatcccca attcaatgcc acccttcgat ttcgggctgg gcgagaccgc
     3901 cgaggcgctg cgcgagcaag tccagcgctt cgcctctgcc gaggtggcgc cgatcgcggc
     3961 cgagctcgac aagaccgacc gctttccgcg cgagctgtgg cccaagatgg gcgagctcgg
     4021 cctgcacggc atcaccgtcg aggaagagta tggcggctcg gggctgggct acctcgagca
     4081 cgtcgtggcg gtcgaggagc tgagccgcgc ctcggcggcc gtcggcctct cctacggcgc
     4141 ccattccaac ctgtgcgtca accagatccg ccgcaacggc agcgacgagc agaagcgccg
     4201 cttcctgccc aagctgatct ccggcgagca tgtcggcagc ctcgccatga gcgagtcggg
     4261 tgcgggctcc gacgtcgtct ccatgaagct gcgcgccgac aagaagggcg accgctacgt
     4321 cttgaatggc accaagatgt ggatcaccaa cagtcccgac gcccaggtgg tcgtggtcta
     4381 cgccaagacc gatcccggcg ccggcgcgcg cggcatcacc accttcatcg tcgaaaccca
     4441 cgccaagggc ttcaaggtgg cgcaaaagct cgacaagatg ggcatgcgcg gctcgtcgac
     4501 cggcgagttg gtgttcgagg attgtgaaat cccggcggag aacgtgctgg gcgccgtcgg
     4561 caagggcgtc aacatcctga tgagcgggct cgactacgag cgtgccgtgc tggcggcagg
     4621 tccgctcggc atcatgcaat cggccatgga tatcgtcgtg ccctacgtcc atgagcggcg
     4681 gcagttcggc caagcgatcg gcgagttcca actggtgcag ggcaagcttg ccgacatgta
     4741 cactaccatg aacgcctgca aggcctatgt gtatgcggtg gccaaggcct gcgaccgcgg
     4801 ccagaccacg cgcaaggatt cggcgggcgc catcctctat gccgccgaaa aggcgacgat
     4861 ggtggcgctc gacgccatcc agcttttggg cggcaacggc tacatcaacg actatccgac
     4921 cggccgtctg ctgcgcgacg ccaagctcta cgagatcggc gccggcacca gcgagatccg
     4981 ccgcatgctg atcggccgcg agctgttcgc cgaaagcgcc tagcgtcatt gcgcgcgagg
     5041 cttacccccg cgcgcgacga ccgagagatt tgaccgcgca aacgtttccg tacacactgt
     5101 gtacgaaaat catgccgcgt tatctgaccg accaggacat cgccgacttc cgcgccgagt
     5161 tgtgccgggt ggcgaccgag cgtttcgccc gcttcggcta cgagggcgtc accatgcgcc
     5221 agctcgccga ggcgctgggc tgcagcccca agactcccta ccgctatttc aaggacaagg
     5281 ccgatatcct ggcaaccgtg cgcgcccagg ccttcaccaa gttcgccgac gcgctggagg
     5341 ccgcagccgc gacggcgggc gacccgatcg agcgggcgcg ccgggtcggc gaggcctatc
     5401 accggttcgc gctcaaaaat tggcacgagt accgcatcat gttcgacatc gatgcgccgc
     5461 tcgatgagaa ccatcccgat ctcggtccgc aggcccatcg agccgcggga tatattacac
     5521 agcaggccga ggagctcgcc aaagcgggcc tgatcgcggt cgaccccaag ctgttcggct
     5581 ggtcgatgtg ggcggcgacg cacgggctgg tcatgctgca gcacgccggt atgctggaac
     5641 atgctcccga ttaccggacc ctggcggatt tccacggcct gctgatgctg aagggcgccg
     5701 gcggtccggc gagaacaagg ccggcaaaga aggcagggaa gaagcgatga cggcaggcgc
     5761 gacggcgggg ataacggcgg gcgagcgttt ccggagctgg gccgacatcc agggcaatgc
     5821 cgcgcgcgcg gccggcggct tcgcaagcct cggtgtgggc gaggacgact gcgtggcgct
     5881 gatggtgcgc aacgaccttg cgaccttcga ggccaacatg gcgggcggtc agctcggcgc
     5941 ctacgccgtg ccgatcaact ggcatttcac gccggaggag gcgggctata tcctcagcga
     6001 ctgcgccgcc aaggtgctgg tggcgcacag cgaccttcta gcccagatcg cttcaggcgt
     6061 tccggccggc gtgaaggtgc tggtggtgcc gacgcctgag gagatcgcga cggcctacaa
     6121 cgtgccggcc gagaagcggc gggcgcccgt gggcagcgag acctggcacg ccttcgtggc
     6181 tcgcagcgcg cccaacaccg agccggccaa ggccagccgc ggcagcatga tctacacctc
     6241 gggcacgacc ggccgtccca agggcgtgcg ccgccagccg tcctcgccgg agatgcaggc
     6301 cgccgccgcg cgggaagtgg cgcgctattg gggccttgag gccgatcctt cgacggtcgt
     6361 gctgatgaac gggccgatgt accactccgc gccagcggcc tacggcatgg gcagcgctcg
     6421 gctcggcctg cacatggtcc tgcagccgcg tttcgacgcc gaggagatgc tgcggctgat
     6481 cgagaagcac agggtcagcc atatgcatat cgtgccgacc atgttcgtgc gcctgctgcg
     6541 cctgcccgag gaggtacgcc ggcgctacga cgtctcgtcg ttgcgctgga tcacccatgg
     6601 cgcggcgccc tgcgcgccgg cggtgaagcg ccagatgatc gactggtggg gaccggtgat
     6661 caccgagtat tacggtgcca ccgaaaccgg cgttgtggtc tggcacgact cgcaggaggc
     6721 tttgcgcaag ccgggcaccg tgggccacgt cgtcgaaggc ggcatcctgc gcgttgtcga
     6781 cgaccagggc cgcgacgtga agcagggcga ggtgggcgag atctacctgc gcgggccgct
     6841 tctcaacgac ttcacttaca acaacgacga cgccaagcgc cgcgagatcg cgctgggcga
     6901 cctcgtgacg gtgggcgacg tcggctacca ggacgccgac ggctacgtgt tcctgtgcga
     6961 tcgcaagcgc gacatgatca tctcgggcgg cgtcaacatc taccccgccg agatcgaatc
     7021 ggtgctgatc cagatgccgg gcgtgcgcga ctgcgcggtg ttcggcattc ccgacgagga
     7081 gttcggcgag cagatctgcg cctatgtcga gccgcaggcc ggcgtcacgc ccgatgcagc
     7141 gcaggtacga ggctatctgg cgcagcatct cgcgcgctac aaggtgccga aagtggtcga
     7201 gttcagcgcc gccttgccgc gggaagactc gggcaagatc ttcaaacgca aactgcgcgc
     7261 cccatattgg gcaaacaccg ggcgcagcat ctgaggagtt ccatgtccga cgacgaggtc
     7321 atcctgtccg gcgagatcag gaacaagctg gtcgacagca agcagaaatg ggccgagaac
     7381 ggccgactgc tgaccggcaa gaccgccgcc ccgtcgcagc ggctgccgcc ccgacagcgc
     7441 cgggtcgaga cctggccgat gctcgatctc ggcatccagc cggaaatccc gagccatgcc
     7501 tggcgcctgt tcgtcgatgg cgaggtcgag cagcctacga catggaagtg gggcgagttc
     7561 accgacctgc ccaagaccac actgacgacc gacatccatt gcgtcaccgc ctggtcgcgc
     7621 tacgacaaca catggcaag
//
LOCUS       DASWGA010001011         4476 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2398055, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001011 DASWGA010000000
VERSION     DASWGA010001011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4476
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2398055"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..321
                     /locus_tag="VF991_23130"
     CDS             <1..321
                     /locus_tag="VF991_23130"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9559404.1"
                     /translation="KRALDMLFTGEPIGAGTALRDGLVSRVVPAAELDKATLDLANTI
                     AAKSPLVLAQGKELFHKHMEMDLEQAYAYATAYMAGAVKREDAKLGIDAFVNKQGLPE
                     WKGR"
     gene            358..642
                     /locus_tag="VF991_23135"
     CDS             358..642
                     /locus_tag="VF991_23135"
                     /inference="COORDINATES: protein motif:HMM:NF015947.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEX9559405.1"
                     /translation="MARRITSKGQVTIPLEIRKRHDFVAGSSVDFREVDGRVVVEKAR
                     ADRPKRPGQAALDALLKARKHWRSPYRSTDDHLDAMRGRDRHPRRYKPTA"
     gene            complement(766..1527)
                     /locus_tag="VF991_23140"
     CDS             complement(766..1527)
                     /locus_tag="VF991_23140"
                     /inference="COORDINATES: protein motif:HMM:NF005451.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX9559406.1"
                     /translation="MDSVVQQDRVKMSEAEWQVRCDLAALYRITDLYGWTDTINTHMS
                     VRIPGEPKCFLINNYGDLFHEITASSLVKMDLDGNVHSTDGSFNAAGFTIHSGVYKAR
                     PDANCVMHTHTRAGTGISVLKKGLRPISQDALAVLDDLVYHEYGMPSSQEECDLLGVS
                     CQSGSAVVLRNHGLLSVGATIPAALRRLYMLERACEIEIIARSLDEEPAPIADDVIQQ
                     YAARAKAQRASPEFGMADWKAALRQIEGKGIDWRQ"
     gene            1720..2199
                     /locus_tag="VF991_23145"
     CDS             1720..2199
                     /locus_tag="VF991_23145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009759929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEX9559407.1"
                     /translation="MNHDRYDDAYLRKILRENKTIAMVGASANWNRPSYFAMKYLLDR
                     GYKVIPVNPAAVGQEIMGQKVYGSLAELPVKADIVDIFRNSEAAGPITDEAIKHGAKV
                     VWMQLGIRNDEAARRAEAAGLKVVMNRCPKIEHSRLTGSIEWHGIASGVISSKKRAL"
     gene            2200..2853
                     /locus_tag="VF991_23150"
     CDS             2200..2853
                     /locus_tag="VF991_23150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559408.1"
                     /translation="MKPASPDRRKLVLGGAALLAGAIPPGSAVAENAASLTKESTMPP
                     TPDYAVFTEFSPDNKQMKPGWNRRVFTDTDVRKGTAIQCDFATGIVTLAPGAYHITGL
                     SMVAYNSGGEPPEMTTIRAPASAGYCRLRTVDPDVGVESTDLHALDNGDPTVICIGSP
                     SSANLVPSLFERFYETDKTARIVLEHQSGTKPEQIYLRVFVQNSKWHAFARISIRGL"
     gene            complement(2867..3613)
                     /locus_tag="VF991_23155"
     CDS             complement(2867..3613)
                     /locus_tag="VF991_23155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEX9559409.1"
                     /translation="MSVRFVLRAGERGYSWLPSVGLNASYVAGHPDGAITRHSTFNFH
                     DYQSGIPGLGVMKVFGDEVFTPNGTGYNMHPHHNFIIMAFVLGGALTHINTIGKVDEL
                     GKDDYYVFSAGSGGKHSELNIGEKDLAVIYVWVLPGQLLAPPSYRRSHFDRQAGANRI
                     TCLVGEEKGALPIGQVFKVSRLVSDADRSHVYRPSKANGFYAFVLEGEVAIADAILTR
                     RDSIALDGEEKIEIAARTNGTDLLLVETRL"
     gene            complement(3610..3801)
                     /locus_tag="VF991_23160"
     CDS             complement(3610..3801)
                     /locus_tag="VF991_23160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004279415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HEX9559410.1"
                     /translation="MKKYLCLGCGFSYDEARGLPEHGIAPGTRWADIPDDWVCPDCGT
                     PKAGFDMVEIPYYAEGQPA"
     gene            3844..>4476
                     /locus_tag="VF991_23165"
     CDS             3844..>4476
                     /locus_tag="VF991_23165"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9559411.1"
                     /translation="MKFGIFDHMDRAGADLGRQFGERLSLIELYERAGFHAYHLAEHH
                     ATPLGMAPSPSVFLAAVAERTTTLRFGPLVYTVNLYHPLRLIDEICMLDQLSGGRLEL
                     GVGRGISPYEVGYYGVDPATGPERFAEALEVILKGLTQPRLDHAGKYFTFKDVPMEMQ
                     PVQRPTPPLWYGANSLESADRLAKQACNTVVGMRADGVGRFAERYRAAWRA"
BASE COUNT          812 a         1460 c         1437 g          767 t
ORIGIN      
        1 aagcgcgcgc tcgacatgct gttcaccggc gagccgatcg gcgccgggac ggcgctgcgc
       61 gacggcctgg tgagccgcgt cgtgcccgcg gccgagctcg acaaggcgac cctggatctt
      121 gccaacacga ttgccgccaa gtcgccgctg gtgctggcgc agggcaagga gctgttccac
      181 aagcacatgg agatggacct cgagcaggcc tatgcctacg ccaccgccta catggccggc
      241 gccgtcaagc gcgaggacgc gaagctcggc atcgatgcgt tcgtgaacaa gcagggcctg
      301 ccggagtgga aggggcggta gcacggcaaa gcaaatcagc aatattttgg gctgaccatg
      361 gcgcgacgaa ttacgtccaa agggcaagtc accatcccgc tcgaaatacg aaagcggcac
      421 gactttgtgg ccggctcctc cgtcgatttt cgcgaggtcg atggccgcgt tgtcgtggag
      481 aaggcgcgtg cggaccgccc caagcgaccg ggccaagcgg ccctcgatgc gctgctcaag
      541 gcgcgcaagc actggcgctc gccctaccgg agcaccgacg accacctcga tgccatgcgc
      601 ggccgtgacc ggcatcctcg tcgatacaag cctactgcct gacgttttga ccaacgatct
      661 tgcttgggga cgtagtcagc cgagaccatt gccggcgtcg tcgacggcct ttgcatcaac
      721 cagatatgag cgggcctgga gacccgcggt ccggcgtgga gcgctctact gccgccagtc
      781 gatgcccttg ccctcgatct ggcgaagggc ggctttccag tcggccatgc cgaactcggg
      841 cgaggcgcgc tgcgccttgg cgcgggcggc gtattgctgg atgacatcgt cggcgatcgg
      901 cgccggttcc tcgtcgaggc tgcgggcgat gatctcgatc tcgcaggcgc gttccagcat
      961 gtagagccgc cgcagcgcgg ccgggatggt ggcaccgacc gacaaaaggc cgtggttgcg
     1021 cagcaccacc gcactgccgc tctggcagct gacgcccagc aagtcgcatt cttcctgcga
     1081 gctcggcatg ccatactcgt gataaaccag gtcgtcgaga acggcgagcg catcctggct
     1141 gatcggccgc aggcccttct tcagcaccga aatgccggtg ccggcgcggg tgtgggtgtg
     1201 catgacgcag ttggcgtcgg gcctggcctt gtagacgccg ctatggatgg tgaagcccgc
     1261 ggcattgaag ctgccgtccg tgctgtgcac gttgccgtcg agatccatct tcaccaggct
     1321 cgaggcggtg atctcgtgga acaggtcgcc gtaattgttg atcaggaagc atttcggctc
     1381 gccgggaata cgcaccgaca tgtgggtgtt gatggtgtcg gtccagccgt aaagatcggt
     1441 gatgcggtag agcgcggcga ggtcacagcg tacctgccac tcggcttcgc tcatcttgac
     1501 gcggtcctgt tgaacgacac tgtccatcga acgatcctct ccctcgctag ccggccctca
     1561 tgcctgtcag tgggattgta aagcaactca cgggccaggg cgatcaggtc gacgcggcct
     1621 tcctgcagga tctgctccgc ttgatccgca tggacgatca gcccggccgc catgggtcac
     1681 agcagcggct gcgccatgta tagttccccc atgtccgccg tgaaccatga ccgctacgac
     1741 gacgcctacc tgcgcaaaat cctgcgcgag aacaagacca tcgccatggt cggggcctcg
     1801 gccaactgga atcgtccgag ctatttcgcc atgaaatatc tgctcgaccg cggatacaag
     1861 gtcattccgg tcaatccggc cgccgtcggc caggagatca tgggccagaa ggtctatggc
     1921 tcgctcgccg agctgccggt gaaggccgac atcgtcgaca tcttccgcaa ctccgaggcg
     1981 gcaggcccga tcaccgacga ggcgatcaag cacggcgcca aggtggtgtg gatgcagttg
     2041 ggcatacgca acgacgaggc cgcccggcgc gccgaggcgg ccgggctgaa ggtcgtgatg
     2101 aatcgctgcc cgaagatcga gcactccagg cttaccggca gcatcgaatg gcacggcatc
     2161 gcgagcggcg tgatctcgag caagaagcgc gcgctctaaa tgaaacctgc cagccccgat
     2221 cgtcgcaagc ttgtgctcgg cggcgcggcg ctgcttgccg gcgcgatccc gcccgggtcg
     2281 gccgtcgcgg agaatgccgc aagcctcacc aaggagagca cgatgccccc aacaccggac
     2341 tatgcggtgt tcacggagtt ttcacctgat aacaaacaga tgaagcccgg ttggaacagg
     2401 cgggttttca ccgacaccga tgtccgaaag gggaccgcca tccagtgcga tttcgccacc
     2461 ggcatcgtga ccttggcgcc cggcgcgtac cacatcacag ggctgtccat ggtcgcctac
     2521 aactcaggcg gcgagccccc ggaaatgacc accatccgcg cccccgcttc cgcggggtat
     2581 tgcaggctcc gtaccgtcga tccggatgtc ggcgtggagt cgacggacct tcatgcgctc
     2641 gacaacggtg accccacggt gatctgcatc ggcagcccga gttccgccaa cctcgtgccg
     2701 agcctgttcg aaagattcta cgaaaccgac aagacggcgc ggatagtgct ggaacatcaa
     2761 tcgggaacga agccggagca aatctacctg cgggtgttcg ttcaaaattc caaatggcat
     2821 gcattcgccc ggatcagcat ccgaggactc tgagcgaacg cgggcgtcag agccttgtct
     2881 cgaccagcag caggtcggtg ccgttggtgc gggcggcgat ctcgatcttt tcttcgccgt
     2941 ccagcgcaat gctgtcgcgg cgcgtcagga tcgcatcggc gatcgcgacc tcgccttcca
     3001 gcacgaaggc gtagaagccg ttcgcctttg acgggcgata gacatggctt ctgtcggcat
     3061 cgctcaccaa ccgcgaaacc ttgaagacct ggccgatcgg cagcgcgccc ttctcctcgc
     3121 ccaccagaca ggtgatgcgg ttggcgccgg cctggcggtc gaaatggctg cgccggtagg
     3181 atggcggcgc cagaagctgt ccgggcagta cccagacata gatcacagcc aagtccttct
     3241 cgccgatatt gagctcgctg tgcttgccgc ccgagcccgc ggagaagacg taatagtcgt
     3301 ccttcccgag ctcgtcgacc ttgccgatgg tgttgatgtg ggtgagcgcg ccccccagca
     3361 cgaaggccat gatgatgaaa ttgtggtgcg ggtgcatgtt gtagcccgtc ccgttaggcg
     3421 tgaagacctc gtcgccgaat accttcatga cgcccaggcc cggaatgccc gactggtagt
     3481 cgtggaagtt gaaggtcgaa tggcgcgtga tcgcgccgtc gggatggccg gcgacgtagc
     3541 tggcattgag accgaccgac ggcagccagg aatagccgcg ctcgccggcg cgcaggacga
     3601 agcgcacgct catgccggct ggccttcggc gtagtacggg atctcgacca tgtcgaagcc
     3661 cgccttgggc gttccgcagt ccggacagac ccagtcgtcg ggaatgtcgg cccaccgcgt
     3721 gcccggtgcg ataccatgct cgggcaggcc acgcgcctcg tcgtaggaaa agccgcagcc
     3781 cagacacaga tactttttca tcgcgaccta ctctaccatc ggcgcaaacc ggggaaacag
     3841 ctcatgaagt tcggcatctt cgaccacatg gaccgcgccg gcgccgatct cggccgccag
     3901 ttcggcgagc ggctcagcct gatcgagctc tacgagcgcg cgggctttca tgcctatcac
     3961 ctggccgagc accacgcgac gccgctcggc atggcgccct cgcccagcgt gttcctggcc
     4021 gccgtggcag agcgcaccac gaccctgcgc ttcgggccgc tggtctacac cgtgaacctc
     4081 tatcatccgc tgcgcctgat cgacgagatc tgcatgctcg accagctgag cggcgggcgg
     4141 ctcgagctcg gcgtcggccg cggcatctcg ccttatgagg tcggctacta cggcgtcgac
     4201 cccgccaccg ggccggaacg cttcgccgag gcgctcgagg tgatcctgaa gggcctcacc
     4261 cagccgcgcc tcgatcacgc gggcaagtat ttcaccttca aggacgtgcc gatggagatg
     4321 cagcccgtcc agcgtccgac cccgccgctg tggtatggcg ccaattcgct ggagagcgcc
     4381 gaccggctgg ccaagcaggc ctgcaacacg gtggtcggca tgcgggccga tggcgtcggc
     4441 cgcttcgccg agcgctaccg ggcggcgtgg agggcg
//
LOCUS       DASWGA010001012         4713 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1516579, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001012 DASWGA010000000
VERSION     DASWGA010001012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4713
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516579"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /gene="ybgF"
                     /locus_tag="VF991_23170"
     CDS             <1..712
                     /gene="ybgF"
                     /locus_tag="VF991_23170"
                     /inference="COORDINATES: protein motif:HMM:TIGR02795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HEX9559412.1"
                     /translation="LLVIALAVPTAAAAQRMDPVYVEDRLNQLQQAITLLTGQIEQLQ
                     YRNQQLQQQMEKMQADYEFRLEQMEKGGRGSAAPRPAAPGGNLAAAPPPAGAPPASSP
                     PSPAGTANGDQQYHDAFKKLQDGDYAGAEKGFKTFLQGNPKHVLAGNAQYWLGETYYA
                     RRDYQNAMTAFAEGYKVYKASPKGPDNLLKLGVTLAALGRKPDACAVFAKFGQDYPRA
                     TDLQKRRVDQERQKNGCG"
     gene            709..1782
                     /gene="tilS"
                     /locus_tag="VF991_23175"
     CDS             709..1782
                     /gene="tilS"
                     /locus_tag="VF991_23175"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEX9559413.1"
                     /translation="MIGEPAPPLDAGAFACLMAPFEPFEASVVLAVAVSGGRDSLALA
                     LLAQDWATGRGGQAVGLIVDHGLRPESAAEAAVTLDVLARHGIDGAILTWSGAKPQAG
                     VQEAARSARYRLLRDECRRRGIIHLLLAHHADDQAETVAMRAVRRSGPAGLAGMAAQI
                     EHPEVRLLRPLLSVSRAWLTATLRARSVQWVDDPSNSDPRFERARMRAGPRSSAQPPD
                     AGAERPARERALARAAVEVLEFDQDGMAAIDWSCFAALGADLQASLLSRAVQALGGRD
                     HPPRRDRLQRAVHRLCGPADRGKSGKSRDFTLSGCKLMLRQAPDGRRLRWIVRPEHGR
                     NMGQPLVPAAFFACDAPAASHLD"
     gene            1808..3760
                     /gene="ftsH"
                     /locus_tag="VF991_23180"
     CDS             1808..3760
                     /gene="ftsH"
                     /locus_tag="VF991_23180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEX9559414.1"
                     /translation="MNPFNRNAALWIVIVLLLALLYSVFQGGATRTAGNTVSYSDFVR
                     AVEQRQVQDVRIQGNTISGTFREPRNGIQKFATYVPSTPVDEQLMPMLIKNVDRVDAG
                     PAEEGVNLGSIFVSWLPVLVLVGVYIFFLRQMQSGTGRAMGFGKSRARLLTEKHGRVT
                     FEDVAGIDEAKAELEEIVDFLKDPQKFQRLGGKIPKGCLLVGPPGTGKTLLARAIAGE
                     ANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGLGG
                     GNDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVIVPNPDV
                     GGREKILKVHMRKVPLAPDVDPRVLARGTPGFSGADLANLVNEAALRAARVGKRLVTM
                     ADFEFAKDKVLMGTERRSMAMTDDEKKLTAYHEAGHALVSMHVPKSDPLHKVTIIPRG
                     RALGVTMQLPERDHLSHSKQFLESRLAIMFGGRIAEEIIFGPENVTTGAANDIQVATQ
                     TARVMVTAFGMSEKLGRVRYQANEQEVFLGHAVTQTQNVSEATAQLIDQEVRRLIEEA
                     EGKARQILTDRLDDLHLIAKALLEYETLSNDEIGTVLRGEKVVRDDTGGAGTGSDRRR
                     RASVPTSSGQGTGAPGGANPEPQPGV"
     gene            3757..4575
                     /gene="folP"
                     /locus_tag="VF991_23185"
     CDS             3757..4575
                     /gene="folP"
                     /locus_tag="VF991_23185"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013635999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEX9559415.1"
                     /translation="MTAAFAGLSLDRVRLMAILNVTPDSFSDGGEHLDPAQAIDDGLR
                     FVSEGADIVDVGGESTRPGSQPTAADEELRRVLPVVEGLARQGALVSIDTRRASVARA
                     CLDAGARIINDVSALRNDPELMPLVARRGVPVVLMHRRGRSEDKYDGPAYGDVVEEVR
                     RFLLDRARAAEAAGIARERIALDPGIGFGKSVEENVALIAGTARLADAGYPVLVGSSR
                     KGFIGRLTGIAEPRRRDPASVWLAVEAARRGAAIVRVHDVAAVRQALAVSSAMR"
     gene            4587..>4713
                     /locus_tag="VF991_23190"
     CDS             4587..>4713
                     /locus_tag="VF991_23190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008551501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559416.1"
                     /translation="MSRSLFGTDGVRGRANSEPMTAEIAMRIGMAAGEVFNRGGHR"
BASE COUNT          743 a         1649 c         1608 g          713 t
ORIGIN      
        1 gctgctcgtg attgcgctgg ccgtgccgac cgcggcggcg gcgcagcgca tggacccggt
       61 ctatgtcgag gatcggctca accagctgca gcaggcgatc acgctgctga ccggccagat
      121 cgagcagctc cagtaccgca accagcaact gcagcagcag atggagaaga tgcaggccga
      181 ctacgagttc cgcctggagc agatggagaa gggcggccgt ggcagcgccg cgccgcggcc
      241 tgcggctccg ggcggcaatc tcgcggccgc gccgccgccg gccggcgcgc ctccggcatc
      301 gtcgccgcca tcgccggccg gcacggccaa cggcgaccag cagtaccacg acgccttcaa
      361 gaagctgcag gacggcgact acgccggcgc cgagaaaggt ttcaagacct tcctgcaggg
      421 caatcccaag cacgtcctgg cgggcaacgc gcagtactgg ctgggcgaga cctattatgc
      481 tcgtcgcgac taccagaacg cgatgacggc gttcgccgag ggctacaagg tctacaaggc
      541 cagccccaag ggtcccgaca atctcttgaa gctcggcgtc acgctggccg cactcggccg
      601 caagccggat gcctgcgcgg tgttcgccaa gttcggtcag gactacccgc gcgccaccga
      661 tctgcagaag cgccgcgtcg accaggagcg gcagaagaac ggctgcgggt gatcggggag
      721 ccggcaccgc cgctggacgc cggtgccttt gcgtgcctga tggcgccgtt cgaaccgttc
      781 gaggcctctg tcgtgctcgc cgttgccgtt tccggcggcc gcgattcgct ggcccttgca
      841 ttgctggcgc aggattgggc gacgggacgc ggcgggcagg cggtcgggct gatcgtcgat
      901 cacggcttgc ggcctgagtc ggcggcagag gcggccgtca cgctcgacgt gctggcacgt
      961 cacggcatcg acggcgcaat cctcacctgg tccggcgcca agccgcaggc cggcgtgcag
     1021 gaggcggcgc ggtcggcgcg ctaccggctg ctgcgcgacg aatgccgccg tcgcggcatc
     1081 atccatctgc tgctggccca tcacgccgac gatcaagccg agaccgtggc catgcgcgcg
     1141 gtccgtcgca gcggtcctgc cggcctcgcc ggcatggcgg cgcagatcga gcacccggaa
     1201 gtgcgcctgt tgcgtccctt gcttagcgtg tcgcgggcat ggctcaccgc aacactgcgc
     1261 gcacgcagcg tgcagtgggt tgacgatcct tccaacagcg atccgcgctt cgagcgggcg
     1321 cggatgcggg ccggcccgcg ttcatccgcg caaccgccag acgcgggcgc cgaacgcccg
     1381 gctcgcgagc gcgcgctcgc tcgcgcggcg gtcgaggtgc tggagttcga ccaggatggc
     1441 atggctgcca tcgactggag ctgctttgcc gcgctcggcg ccgacctgca ggcaagtctg
     1501 ctgagccgcg cggtccaggc cttgggcggg cgagaccacc cgccgcgccg cgaccgcctg
     1561 cagcgggcgg tgcatcgcct gtgtgggcca gccgaccgtg gaaaatccgg caagagccgg
     1621 gatttcacgc tttccggctg caagttgatg ctgcggcaag cgcccgacgg ccgccggctg
     1681 cgctggattg ttcggcccga acatggcagg aacatgggcc agcccctcgt tccggctgca
     1741 ttttttgctt gcgacgcgcc ggccgcttcc catttagatt aagcttccac cccaacggac
     1801 aaagccagtg aacccgttca accgtaacgc cgccttgtgg atcgtcatcg tgctgctgct
     1861 ggcgctgctc tacagcgtct tccagggcgg ggcgacccgg acggcgggca acacggtctc
     1921 ctattcggac ttcgtgcgcg ccgtcgagca gcgccaggtc caggacgtgc ggatccaggg
     1981 taacaccatc agcggcacct tccgcgaacc gcgcaacggc atccagaagt tcgccaccta
     2041 cgtgccgagc accccggtcg acgaacagct gatgccgatg ctgatcaaga acgtcgatcg
     2101 cgtcgatgcc gggccggccg aggagggcgt caatctcggc agcatcttcg tgagctggct
     2161 gcccgtcctc gttcttgtcg gtgtctacat tttcttcctg cgccagatgc agagcggcac
     2221 cggccgcgcc atgggcttcg gcaagtcgcg ggcgcggctg ctgaccgaga agcatggccg
     2281 tgtcaccttc gaggacgtcg ccggcatcga cgaggccaag gccgagctcg aggagatcgt
     2341 cgacttcctg aaggaccccc agaagttcca gcgcctgggc ggcaagatcc ccaagggctg
     2401 cctgctggtc ggcccgccgg gcaccggcaa gaccttgctg gcgcgcgcca tcgccggcga
     2461 agccaacgtg ccgttcttca ccatctcggg ctccgacttc gtcgagatgt tcgtgggcgt
     2521 cggcgccagc cgcgtgcgcg acatgttcga gcaggccaag aagaatgcgc cgtgcatcgt
     2581 cttcatcgac gaaatcgacg cggtcggccg ccatcgcggc gccggcctgg gcggcggcaa
     2641 cgacgagcgc gagcagacgc tgaaccagtt gctggtcgag atggacggct tcgaatccaa
     2701 cgaaggcgtc atcctgatcg ccgccaccaa ccggcccgac gtgctcgatc cggcactgct
     2761 gcggcccggc cgctttgacc gccaggtcat cgtgcctaac cccgatgtcg gtggccgcga
     2821 gaagatcctg aaggtccata tgcgcaaggt gccgctggcg cccgacgtcg atccgcgcgt
     2881 gctggcgcgc ggcacgccgg gtttctctgg cgccgatctc gccaacctgg tgaacgaggc
     2941 cgccctgcgc gccgcccgcg tcggcaagcg cctggtcacg atggccgact tcgagttcgc
     3001 caaggacaag gtgctgatgg gcaccgagcg ccgctcgatg gcgatgaccg acgacgagaa
     3061 gaagctcacc gcctatcatg aggccggtca cgcgctggtc tccatgcacg tgcccaagag
     3121 cgatccgctg cacaaggtga cgatcatccc gcgcggccgg gcgctcggcg tcaccatgca
     3181 gctgcctgag cgcgatcacc tctcgcacag caagcagttc ctcgaatcgc gcctggccat
     3241 catgttcggc ggccgcatcg ccgaggagat catcttcgga ccggagaacg tcacgaccgg
     3301 cgccgcaaac gacatccagg tcgcgacgca aacggcgcgc gtcatggtca ccgccttcgg
     3361 catgtccgag aagctcggcc gcgtgcgcta ccaggcgaac gagcaggaag tgttcctggg
     3421 ccacgccgtg acccagacgc agaacgtctc ggaggccacc gcccagctga tcgaccagga
     3481 ggtccgccgc ctgatcgaag aggccgaggg caaagcgcgc cagatcctga ccgaccgcct
     3541 ggacgacctc cacctgatcg ccaaggcgct gctcgagtac gagacgctga gcaacgacga
     3601 aatcggcacg gtcctgcgcg gcgagaaggt tgtgcgcgac gataccggcg gcgccggaac
     3661 cggctccgac cgccgccgcc gcgcctcggt gccgaccagc tcgggccagg gcaccggtgc
     3721 gccgggcggc gccaatcccg agccgcagcc gggcgtttga cggcggcctt cgccggcctt
     3781 tcgctcgacc gcgtcaggct gatggcgatc ctgaacgtca cacccgattc cttctccgac
     3841 ggcggagagc acctcgaccc cgcgcaggcc atcgacgatg gcctgcgttt tgtttcggag
     3901 ggcgccgaca tcgtcgatgt tggcggcgag tcgacgcgtc ccggttcgca gccgacagcg
     3961 gccgacgagg agttgcgccg tgtcctgccg gtcgtcgagg gcctggcgcg gcaaggcgcg
     4021 ttggtgtcga tcgacacgcg tcgtgcttcg gtggcgcgcg cctgcctcga tgccggcgcg
     4081 cgcatcatca atgacgtgtc ggcgctccgc aacgatccgg aactgatgcc gctggtcgcc
     4141 cggcgcggcg tgccggtcgt gctgatgcat cgccgcggcc gatccgagga caagtatgac
     4201 ggaccggcct atggcgacgt cgtcgaggag gtgaggcgct tcctgctcga ccgcgcccgc
     4261 gccgccgagg ccgccggcat cgcccgcgag cgcatcgcgc tcgacccggg catcggcttc
     4321 ggcaagagcg tcgaagagaa cgtcgctctg atcgccggca cggcacggct ggccgacgcc
     4381 ggctaccctg ttctggtggg ctcctcgcgc aagggcttca tcggcaggct gaccgggatt
     4441 gccgagccgc gccggcgcga tccggcctcg gtgtggctgg cggtcgaggc cgcacgccgc
     4501 ggcgccgcca tcgtgcgcgt ccacgacgtc gccgccgtcc gccaagccct cgcggtctca
     4561 tcggcaatgc gataggttcg gcgatcatgt cccgttctct cttcggcacc gacggtgtgc
     4621 gcggccgcgc caatagcgaa ccgatgaccg ctgagatcgc catgcgcatc ggcatggcgg
     4681 cgggcgaggt cttcaaccgc ggcggccatc gcc
//
LOCUS       DASWGA010001013         2037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2523658, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001013 DASWGA010000000
VERSION     DASWGA010001013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2523658"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..777)
                     /locus_tag="VF991_23195"
     CDS             complement(<1..777)
                     /locus_tag="VF991_23195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018207948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEX9559417.1"
                     /translation="MSVSQADKAQKFRALHEAPGAFVIANPWDAGSARMLAGLGFPAL
                     ATSSGAKAGVLGKRDGKVTREEALANAKMIVEACDLPVAADLEKGFGDAPDAAAETIR
                     QAAGVGLVGGSIEDATGNKDKPLYDIEVATRRVAAAVKAARALSFPFTLTARAEGFLR
                     GQPDLDDVIRRLQAFEAAGADVLFAPGLPDLAAVKKVCSALTKPFNFMVGIKGRSFTK
                     ADLEAAGVKRISLATSLYRAAMTGLLDAAKEVKEKGTFTYL"
     gene            complement(829..1035)
                     /locus_tag="VF991_23200"
     CDS             complement(829..1035)
                     /locus_tag="VF991_23200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559418.1"
                     /translation="MLRETIGLFVDDGMLALALLAVVGLAAWSFNDARFDEAAAAAIL
                     VGGCLVVLVWSVLRAAHAQRASRG"
     gene            complement(1040..1804)
                     /locus_tag="VF991_23205"
     CDS             complement(1040..1804)
                     /locus_tag="VF991_23205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559419.1"
                     /translation="MEALSWHVILPAVGAAFLASLVEVVEGFTIVLAVGTTRGWRPAL
                     QGSLAGLAVLALLVAILGPTLERVPLNWLQLAIGILLLLFGMRWLRKAILRTAGVIAL
                     HDETAAFAAERAELGGAAPRGRGAIDWLAATAAFKAVVLEGLEVVFIVIAVGAGRGLL
                     VPASLGAVAACALVLAIGVAVHRPLAQVPENSLKFAVGVLLSAFGMFWTGEGLGIDWP
                     GGDLVIVAFIAIFLVVGLLSVAAAKMIASEERHDLA"
     gene            1857..>2037
                     /locus_tag="VF991_23210"
     CDS             1857..>2037
                     /locus_tag="VF991_23210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEX9559420.1"
                     /translation="MRHSASVQERVTCNLERLSPAEREVARFFQDNREEVMVASAQAL
                     AARIGTSDATVVRTTR"
BASE COUNT          374 a          703 c          673 g          287 t
ORIGIN      
        1 gagataggtg aaggtgccct tctccttcac ctccttggcc gcgtccagca gcccggtcat
       61 ggccgcgcga tagagcgagg tggcgaggct gatgcgcttg acgccggcgg cctcgaggtc
      121 ggctttggtg aaggaacggc cctttatgcc gaccatgaaa ttgaacggct tggtgagggc
      181 actgcacact tttttcaccg cggcgagatc gggcaggccg ggcgcgaaca gcacgtcggc
      241 gcccgccgcc tcgaaagcct gcaggcgccg gatgacgtca tcgagatcgg gctggccgcg
      301 caaaaatcct tcagcgcgtg ccgtcaaagt gaaggggaag gacagcgcgc gcgccgcctt
      361 gaccgcggcg gcgacgcgcc gggtcgcgac ctcgatgtcg taaagcggct tgtccttgtt
      421 gccggtcgcg tcctcgatcg agccgccgac cagcccgaca ccggcggctt gccggatcgt
      481 ctcggcggcc gcatccggcg catcgccgaa gcctttctcg aggtcggcgg cgacgggaag
      541 gtcgcaggcc tcgacgatca tcttggcgtt ggccagcgcc tcctcgcggg taaccttgcc
      601 gtcgcgcttg cccaagacgc cggccttggc gccgctcgag gtcgccagcg ctggaaagcc
      661 cagcccggcc agcatgcgcg ccgagccggc gtcccatgga ttggcgatca cgaaggcgcc
      721 gggcgcctcg tgcagggcgc gaaatttttg ggccttgtcg gcctgactga cgctcattgg
      781 cttccttccc tcgtccaaat gggcggggac tttagcacgg ccggggttct atccgcgcga
      841 tgctcgttgc gcatgggcgg cgcgcagcac gctccagacg aggacgacca gacagccgcc
      901 gaccaaaatc gcggcggcag ccgcttcgtc gaaacgcgcg tcgttgaagc tccaggcagc
      961 cagtccgacg acagccagga gggcaagcgc cagcatgccg tcgtccacga acaggccgat
     1021 ggtttcgcgc agcatggttt taagcaaggt catgacgctc ctccgaggcg atcatcttgg
     1081 ccgcagcgac cgatagcagg ccgaccacga ggaagatcgc gataaaggcc acgatcacca
     1141 ggtccccgcc cggccaatcg atgcccaacc cctcgccggt ccagaacatg ccgaaggccg
     1201 acagaagcac gccaacggcg aacttcagcg aattctcagg gacctgcgcc aaggggcgat
     1261 ggacggcaac gccgattgcc agcaccaggg cgcaggccgc gaccgcccca aggctcgccg
     1321 gcaccagcag cccgcggccc gcgccgacgg caatgacgat gaaaacgact tcgagcccct
     1381 ccaggacgac agccttgaag gcggcggtcg ccgccagcca gtcgatcgcg ccacggccgc
     1441 gcggcgccgc gccgccgagc tcggcccgtt cggccgcgaa ggcagccgtc tcatcgtgca
     1501 aggcaatcac gccggccgtc cgcaggatcg ccttgcgcaa ccagcgcatg ccgaacagca
     1561 gcagcaggat gccgatcgca agctgcagcc aattcagcgg aacgcgctcg agggtgggcc
     1621 caaggatcgc gaccagcaag gcgagcacgg ccagccccgc caggctgcct tgcagcgccg
     1681 gccgccagcc gcgcgtcgtt ccgacggcaa gcacgatggt gaagccctcg acgacctcga
     1741 ccagcgaggc caggaaggcc gcgccgacgg cgggcaggat tacgtgccaa gacagggctt
     1801 ccatggggcg ctctctctgt tgcgttcact acaatatacc actatatgtg tcgcaaatgc
     1861 gacattcggc atccgtccag gagcgcgtaa cgtgcaatct cgaaaggctg agcccggccg
     1921 agcgcgaggt cgcccgcttc ttccaggaca atcgcgagga agtgatggtg gcatcggccc
     1981 aggccttggc cgcccgcatc ggcaccagcg acgccacggt ggtgcgcacg acacgcg
//
LOCUS       DASWGA010001014         5921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2398671, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001014 DASWGA010000000
VERSION     DASWGA010001014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 5921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5921
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2398671"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1083
                     /locus_tag="VF991_23215"
     CDS             <1..1083
                     /locus_tag="VF991_23215"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEX9559421.1"
                     /translation="PIDRANAAGRQVLRLGAAQLLFLGTPAHAAVDTSVRLIVDAGLP
                     HLKGLANAVLRRVAREGLALLGDRDPARLNTPQWLWQSWLDTYGEDTTRAIAAAHLVE
                     APLDLMPRANAQFWAGQLDGELLATGTIRRTAGGAITELPGFTEGAWWVQDAAATLPA
                     RLLGDVLGKRVADLCAAPGGKTLQLAAAGAHVTAVDISARRMARLGENLARTGLSAEL
                     VTADAGKWTPAEKFDAILLDAPCSGTGTLRRHPDIAWLKDDEDVGRLTLTQDRLLAQA
                     IALLKPGGRLVYTVCSLQEDEGPARIDGLLARDKRLRRLPVQPAEMPGLEGTITPAGD
                     VRTLPSMWSERGGLDGFYIARATRPD"
     gene            1145..2173
                     /gene="dctP"
                     /locus_tag="VF991_23220"
     CDS             1145..2173
                     /gene="dctP"
                     /locus_tag="VF991_23220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEX9559422.1"
                     /translation="MIPRRRILAASAATALAAPWIGGTARAQSKQLKISHQFPGGTVD
                     SGDFRDQLCRRFAAALAKKTNGELTAEVYPGSSLVKTVAQYSAIRRGALDMTLYPLNY
                     AGGEVSEYNIGFMPGVISSLDQAYAWKNAEIGKRLTALMAEKGAIPVTWLWQAGGSAS
                     RTHPILVPDDVKGLKVRGGSREMDLMLKGAGAAVVSMPSNELYAAMQTGTMDVAMTSS
                     TSLMSFRLEEIAKNLTTGRGKGFFFIFEPLLMSKQVFDSLPKDQQAAIMEVGLEMEKF
                     GLEKSKEDDVTVAKVYEKAGIKTFDLDQAQVDKWKAVARDTCWKDYADKSPSNAEFLK
                     LSQQVPSA"
     gene            2170..2631
                     /locus_tag="VF991_23225"
     CDS             2170..2631
                     /locus_tag="VF991_23225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX9559423.1"
                     /translation="MTPLALLNRAIVVLSAVALLIASCVLTYSVVLRYFSPQPTDWQD
                     EFSVFLLIGVTFMAAAWVQSQRGHIGIEAVAHLLPPAIDRVRLRLVDAASALFCAFFA
                     WKSWTLLHEAWADGYVSSSSWAPPLWIPYLAMALGMSLLTVQIVLQVFRRP"
     gene            2628..3980
                     /locus_tag="VF991_23230"
     CDS             2628..3980
                     /locus_tag="VF991_23230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX9559424.1"
                     /translation="MSVLQIGLLYGGATLVAMFSGMPIAFALGLVATVFMVAFMPGAA
                     LDTVTQNVYEEMSSITLLSIPLFILKGAAIGRSPAGKDLYSALHVWMSRIPGGLGIAN
                     VFACALFAAMAGSSPATCSAIGSAGIPEMRQRGYPGGFAAGLIAAGGTLGILLPPSIT
                     MILYAVASEQSLGRLFLAGIGPALLLVAFFAAYAAWRYRFETRRARTTREGGGVDSAL
                     LSTESYTLRQRLAALPRVLPFVILLTGVMVALYGGFATPSETAGLGAVLALVLIAVIY
                     DTWRPRQLDPIMVNTIRESTMLMMIIGMSLLYSYVMSYLHISQSAAEWIVSMHFSRWV
                     LLAAILVLVVILGFFLPPVSIILMTAPIILPPLKAAGFDLVWFGVVMTIVMEMGLIHP
                     PVGLNLFVIKNIAPDIPLSDVIWGVLPFVALMTVAVVVLCFAPEIAVWLPDKLITTTR
                     "
     gene            complement(4101..5642)
                     /locus_tag="VF991_23235"
     CDS             complement(4101..5642)
                     /locus_tag="VF991_23235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012322054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9559425.1"
                     /translation="MATSLVRSRAAITGTKDRFSWNEVKDGAVLQEDGVITAVGTYDD
                     LHSKHPTVPVIGTGKEVLLPGFVNGHHHVGLTPVQLGSPDMPLELWFITRMVIRNLDL
                     YLDTLYSAFEMIGSGITTVQHIHGWMPGTLPEVEKRAGEVIRAYEDVGMRVSYCYAVR
                     DQNRLVYQADEEFVAGLPAELQGPMKRWFERFKMGLDDAMDMFKSFHSQHHNKRRVKI
                     QLAPANLHWCSDKALTALSDASAKYDVPMHMHLVETAYQKEYAWRRGNCTALEYIDRF
                     GMVNNRLTLGHGVWLNEKDIDRLAGAKGCICHNCSSNFRLRSGVAALNFFEKKGINTA
                     IGLDEAGINDDRDMLQELKLVLRAHRVPGMVEADVPTMAQVLRMATVGGARTTPYGES
                     IGTLEVGKAADMVLIDWESVAYPYLDELTPTLDAVVQRAKNQAVTMTMCDGEVIYKDG
                     QFTKVDRTVALKALHDDLSKALADDEVERRKLSKALLPYARKFYADYIDTSKHQPFYR
                     PSSMV"
BASE COUNT          897 a         2013 c         1918 g         1093 t
ORIGIN      
        1 ccaatcgacc gcgccaacgc cgccggccgg caagtgctgc ggctgggcgc ggcacagctt
       61 ctgttcctcg gcacgccggc ccatgccgcg gtcgacacgt cggtgcgcct gatcgtcgat
      121 gccggcctgc cgcatctcaa gggcctggcc aacgccgtgc tgcgccgcgt ggcgcgcgag
      181 ggcctggcgc tcttgggcga tcgcgatccg gcgcggctca acacgccgca atggctgtgg
      241 cagagctggc tcgacaccta tggtgaagac accacgcgcg ccatcgccgc ggcccacctc
      301 gtcgaggcgc cgctcgacct catgccgcgc gccaatgccc agttctgggc gggccagctg
      361 gacggcgagc tgttggcgac cggcacgatc cgccgcaccg cgggtggcgc catcaccgag
      421 ctgccgggtt tcaccgaggg cgcgtggtgg gtgcaggacg ctgctgccac cctgcccgcc
      481 cgcctgctcg gcgacgtttt aggcaagcga gtggccgatc tctgcgccgc gcccggcggc
      541 aagaccctgc agctcgccgc cgccggcgcc catgtcacgg cggtcgatat ctcggcccgc
      601 cgcatggcgc ggctcggcga gaacctggcg cgcaccgggc tgtcggctga actggtgacg
      661 gccgatgccg gcaaatggac gccggcggag aagttcgacg ccatcctgct cgatgcgccc
      721 tgctcgggca ccggcacctt gcggcgccat cccgacatcg cctggttgaa ggacgacgag
      781 gatgtcggcc ggctcacgct gacccaggac cgcctgctgg cgcaggcgat cgctctgctg
      841 aaacccggcg gcaggctggt ctacaccgtg tgttcgctgc aggaggacga gggtccggca
      901 cggatcgacg ggttgctcgc ccgcgacaag cggctgcggc ggctgccggt gcaaccggcc
      961 gaaatgccgg gcctggaggg gacgatcacg cccgccggcg atgtgcggac cctgccatcg
     1021 atgtggtcgg aacgcggcgg gctcgacggc ttttatatag cacgcgccac tcggccggat
     1081 tgacttcgat agccatatga aacccaatcc ggtccaagca aagaaactct ggaggaaccg
     1141 catgatcatc ccacgccgaa ggattctcgc cgcgtcggcc gccacggctc tcgccgcgcc
     1201 ctggatcggc ggcacggccc gtgcccagtc caagcagctc aagatctcgc accagttccc
     1261 gggcggcacc gtcgacagcg gcgatttccg cgaccagctc tgccgccgct ttgccgccgc
     1321 gctcgccaag aagaccaacg gcgagctgac ggccgaagtc tatcccggct cgtcgctggt
     1381 caagacggtg gcgcagtatt cggcgatccg ccgcggcgcg ctcgacatga cgctctatcc
     1441 gctgaactac gccggcggcg aggtgagcga gtacaatatc ggcttcatgc cgggcgtcat
     1501 cagctcgctc gaccaggcct atgcctggaa gaacgccgag atcggcaagc gcctgaccgc
     1561 gctgatggcc gagaagggcg cgatccccgt cacctggctg tggcaggccg gcgggtcggc
     1621 cagccgcacc catcccatcc tggtgcccga tgacgtgaaa ggcctaaaag tgcgtggcgg
     1681 cagccgcgag atggacctca tgctgaaggg cgccggcgcc gccgtggtca gcatgccgtc
     1741 gaacgagctc tacgccgcca tgcagaccgg cacgatggac gtcgccatga cttcctcgac
     1801 cagcctgatg tcgttccgcc tggaagagat cgccaagaac ctgacgaccg gccgcggcaa
     1861 gggcttcttc ttcatcttcg agccgctcct gatgtccaag caggtcttcg attcgctgcc
     1921 caaggaccag caggcggcga tcatggaggt cggcctggag atggagaagt tcgggctgga
     1981 gaagtccaag gaagacgacg tcaccgtcgc caaggtctac gagaaggccg gcatcaagac
     2041 cttcgatctc gaccaggcgc aggtcgacaa gtggaaggcg gtggcgcgcg acacctgctg
     2101 gaaggattac gccgacaagt cgccgagcaa tgccgagttc ctgaaactgt cgcagcaagt
     2161 cccgtccgcg tgacgccgct tgcgctactc aacagggcga tcgtcgttct ctcggcggtc
     2221 gcccttctca ttgcctcctg cgtgctgacc tactcggtcg tgctgcgcta tttctcgccg
     2281 cagccgaccg actggcagga cgaattctcg gtcttcctgc tgatcggcgt caccttcatg
     2341 gcagccgcct gggtgcagtc gcagcgcggc catatcggca tcgaggcggt ggcgcatctg
     2401 ctgccgcccg cgatcgaccg cgtacgcctg cgcctggtcg atgccgccag cgcgctgttc
     2461 tgtgccttct ttgcctggaa atcctggacg ctgctgcacg aggcctgggc cgacggttac
     2521 gtcagttcct cgtcgtgggc gccgcccttg tggattcctt acctcgcgat ggcgctcggc
     2581 atgtcgctgc tcaccgtgca gatcgtgctg caagtctttc gccggccatg agcgtcctgc
     2641 agatcggcct gctctatggc ggcgccaccc tggtcgccat gttctccggc atgccgatcg
     2701 cctttgcgct cggcctggtg gccaccgtgt tcatggtcgc cttcatgccg ggcgccgcgc
     2761 tcgatacggt gacgcagaac gtctacgagg aaatgtcctc gatcacgctc ttgtcgatcc
     2821 cactgttcat cctcaagggc gccgccatcg gccgctcacc cgccggcaag gatctttatt
     2881 cggcgctgca tgtctggatg agccgtattc ccggcgggct gggcatcgcc aacgtcttcg
     2941 cctgcgcctt gttcgccgcc atggccggct ccagcccggc cacctgctcg gcgatcggct
     3001 cggccggcat cccggagatg cgccagcgcg gctatcccgg cggtttcgcc gccggcctga
     3061 tcgccgccgg cggcacgctc ggtatcctgc tgccgccctc gatcaccatg atcctttatg
     3121 cagtggcctc ggagcagtcg ctcggccggc tgttcctggc gggcatcggg ccggcgttgc
     3181 tgctggtggc gttcttcgca gcatacgccg cctggcgtta ccgtttcgag acgcgccgcg
     3241 cacgcaccac ccgcgagggc ggcggcgtcg attcggcgct gctgtcgacc gagagctaca
     3301 cgcttcgcca gcgcctggcg gcgctgccgc gcgtgctgcc cttcgtcatc ctgctgaccg
     3361 gcgtcatggt ggcgctctat ggcggcttcg ccacgccgtc ggaaaccgca ggcctgggcg
     3421 ccgtgctcgc cctggtgctg atcgccgtca tctacgacac ctggcggccg cgccagctcg
     3481 atcccatcat ggtcaacacc atccgcgaat cgaccatgct gatgatgatc atcggcatgt
     3541 cgctgctcta ctcctatgta atgagctacc tgcacatcag ccagtcggcg gcggagtgga
     3601 tcgtgtcgat gcatttctcg cgctgggtgc tgctggccgc catcctggtg ctggtggtga
     3661 tcctgggctt cttcctgccg ccggtgtcga tcatcctgat gaccgcgccc atcatcctgc
     3721 cgcccttgaa ggccgccggc ttcgacctgg tgtggttcgg cgtcgtcatg accatcgtca
     3781 tggagatggg gctgatccat ccgccggtcg ggctcaacct cttcgtcatc aagaacatcg
     3841 cgcccgacat tcccttgagc gacgtgatct ggggcgtgct gccgttcgtg gcgctgatga
     3901 cggtggcagt cgtggtcctg tgcttcgcgc ccgagatcgc ggtgtggctg cccgacaagc
     3961 tgatcacgac gacacgttga ttctgtcgtc gcgcgcgggg taacccccgc gctgaagcga
     4021 agcgaaggac ctcatcgccg cttgcaaccg gcatgagatc cttcgctgcg ctcaggatga
     4081 cagcagactt tcgtccgccg tcacaccatc gagctcggcc ggtagaacgg ctggtgcttc
     4141 gatgtgtcga tatagtcggc gtagaacttc cgcgcgtacg gcagcaatgc cttggagagc
     4201 ttgcgccgct cgacctcgtc gtcggccagc gccttgctga gatcgtcgtg cagcgccttc
     4261 agcgccaccg tgcggtcgac cttggtgaac tggccgtcct tgtagatcac ctcgccgtcg
     4321 cacatcgtca tggtgacggc ctggttcttg gcgcgctgga ccacggcgtc gagcgtgggc
     4381 gtgagctcgt cgagataggg ataggcgacg ctctcccagt cgatcaacac catgtcggcc
     4441 gccttgccga cctcgagcgt gccgatgctc tcgccatacg gcgtcgtgcg cgcgccgccg
     4501 accgtcgcca tgcgcagcac ctgcgccatg gtcggcacgt ccgcctcgac catgccgggc
     4561 acgcgatggg cgcgcagcac cagcttcagc tcctgcagca tgtcgcggtc gtcgttgatg
     4621 ccggcctcgt cgaggccgat cgcggtgttg atgcccttct tttcgaagaa attgagcgcc
     4681 gccacgcccg agcgcaggcg gaaattggac gagcagttgt ggcagatgca gcccttggcc
     4741 ccggccaggc ggtcgatgtc tttttcgttc aaccacacgc catggcccag ggtcagacgg
     4801 ttgttcacca tgccgaagcg gtcgatgtac tccagcgccg tgcagttgcc gcgccgccag
     4861 gcatattcct tctggtaggc ggtctcgacc aggtgcatgt gcatgggcac gtcgtacttg
     4921 gccgaggcgt cgctgagcgc cgtcagcgcc ttgtcggaac accagtgcag gttggccggc
     4981 gccagctgga tcttcacccg gcgcttgttg tgatgctgcg aatggaagga cttgaacatg
     5041 tccatggcat cgtcgaggcc catcttgaag cgttcgaacc agcgcttcat cgggccctgc
     5101 agctcggccg gcagaccggc cacgaactcc tcgtcggcct ggtagaccag ccggttctgg
     5161 tcgcgcaccg cgtagcagta gctgacccgc atgccgacgt cttcgtaggc gcggatcacc
     5221 tcgcccgccc gcttctcgac ctcgggaagc gtgcccggca tccagccatg gatgtgctgc
     5281 accgtggtga tgcccgagcc gatcatctcg aaggccgagt agagcgtgtc gagatagagg
     5341 tcgaggttgc ggatcaccat gcgggtgatg aaccacagct cgagcggcat gtcgggcgag
     5401 ccgagctgca ccggcgtcag gccgacgtga tgatggccgt tgacgaagcc cggcagcagc
     5461 acctccttgc ccgtgccgat caccggcacc gtcggatgct tgctgtgcag atcgtcgtag
     5521 gtcccgacgg ccgtgatgac gccgtcctcc tgcagcacgg cgccgtcctt gacctcgttc
     5581 caggagaaac ggtccttggt gccggtgatg gcggcgcggc tgcggacgag actggtggcc
     5641 atggatttct ccttgtctat cgcctccccc gtcatacggg ggaggtgccc cgtcttacgg
     5701 ggcagagggg gaaggcctca atgaaggcct tcaaatttca gatctgaaaa ttgccgagaa
     5761 ttatctgtga ggctttcccc ctccggccct tcgggccacc tcccccgtat gacgggggag
     5821 gatgttagat ggcggtcgcg gcgaacgctt cctgctcggc gaaggcgcgg tcgacctcgt
     5881 cgcgcaacag ctcggtgagc tggatgcgca tcgcctcggc c
//
LOCUS       DASWGA010001015         2960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1770356, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001015 DASWGA010000000
VERSION     DASWGA010001015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1770356"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1397)
                     /locus_tag="VF991_23240"
     CDS             complement(<1..1397)
                     /locus_tag="VF991_23240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013417984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HEX9559426.1"
                     /translation="MIPAYQLVVLLPYAAALLLVAIPGYRVGAVVNVIASAATLAAGL
                     WLVTGEYRVGDYAIVDEFNIVFIGINTLVGFTAALFSASYIGHEIETGRLSPGFVRFY
                     HAMFQAMMGSMNLALVANNIGLMWVGLELATLITVVMVGLYRTPQSIEAAWKYFILAS
                     VGISLAFFGTILIYLAGQPALGEGVPAMTWSLLQAAAARMDPGILDLAFIFLLIGYGT
                     KVGLAPLHAWLPDAHAEGPTPVSAVLSGLLLNVALYALLRFKMLVAGQPAALDPGPIM
                     VVMGLVSLIFAAFMLYQRRDIKRLFAYSSIEHMGLIVFAFGMGGPLANFAGLLHMAMH
                     SLTKSGIFFAVGHIAQAKGTQRIAEIKGLSVTHPRLAVAFALAVLAICGMPPFGVFTS
                     EFLILTTTFAREPWLALLPAFGLLVGFGALLMRLQDTLFGEPVGPAHRVDASSVPMVL
                     HLLLVLAAGIFLPPVL"
     gene            complement(1394..2011)
                     /locus_tag="VF991_23245"
     CDS             complement(1394..2011)
                     /locus_tag="VF991_23245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004119442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-4 component E"
                     /protein_id="HEX9559427.1"
                     /translation="MLVTSFALLYQERIAAVLNAFAAQSITLALSVAWAAWSDNRPDL
                     FITALIALTLKGIVIPVALHRTVARLGIHREVEKVVGVGVALMVGLALTGLAQALVVK
                     VATGTASHAREELALALAIVLLGFLMMIVRRNAVTQVVGFMSMENGLILAATGARGMP
                     LVVEVSVAFSVLISLFVFAVFVFRIRERFDTVDIEALDRMRGDRR"
     gene            complement(2050..2958)
                     /locus_tag="VF991_23250"
     CDS             complement(2050..2958)
                     /locus_tag="VF991_23250"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HEX9559428.1"
                     /translation="MLAPLAVGVTRRVKARLTRRQGAPLRQGYLDIAKLLRKESVIAE
                     GASWLFRSAPYLIFALTWVAAALVPSFASGLMFNWAADVVALVALLGAARALLALAGM
                     DVGTSFGGIGSSREMMIATLAEPAMMLIVLTLAIAAGTTRLAGVADFFIAEPFAVRVS
                     MALSLIALVIVALAENARIPVDNPMTHLELTMVHEAMVLEYSGRHLALIEAASHLKLV
                     LYLSLLICLFAPFGMAPAAAGLSGWAIGLLAWVAKLLGSAALLGVWEVSIAKMRVFRL
                     PDFVGIAFVFGFLAILLAFLTRGVFA"
BASE COUNT          609 a          991 c         1005 g          355 t
ORIGIN      
        1 agcaccggcg gcaggaagat gcccgccgca agcaccagca acaggtgcag caccatgggc
       61 accgacgagg cgtcgacgcg atgggcgggg cccaccggct cgccgaaaag cgtgtcctgc
      121 aggcgcatca acaacgcgcc gaagccgacc agcaggccga acgccggcag cagggccagc
      181 cacggttcgc gcgcgaaggt cgtggtcagg atcaggaact cgctggtaaa cacgccgaac
      241 ggcggcatgc cgcagatcgc cagcacggcc agcgcgaagg ccacggccag ccgcggatgg
      301 gtgacgctca gccccttgat ttcggcgata cgttgcgtgc ctttggcctg ggcgatgtgt
      361 ccgacggcga aaaagatgcc ggatttggtc aggctgtgca tggccatgtg caacaggccg
      421 gcgaagttgg cgagcggccc gcccatgccg aaggcgaaca cgatcaggcc catgtgctcg
      481 atcgacgaat aggcgaacag ccgctttatg tcgcgccgct gatacagcat gaaggcggcg
      541 aagatcagcg acaccaggcc catcaccacc atgatcggac cgggatcgag ggcggccggc
      601 tggcccgcca ccagcatctt gaagcgcagc agggcgtaga gcgccacgtt cagcagcaga
      661 cccgagagga ccgccgagac cggcgtcggg ccctcggcgt gggcatcggg cagccaggca
      721 tgcaacggcg ccagcccgac cttggtgccg taaccgatca gcaggaagat gaaggcgaga
      781 tcgaggatcc ccgggtccat gcgcgcggcc gccgcctgca ggaggctcca ggtcatcgct
      841 ggcacgccct cgccgagcgc cggctggccg gcgagataga tcaggatggt gccgaagaag
      901 gcgagcgaga tgccgacgct ggccaggatg aagtacttcc acgccgcctc gatcgactgc
      961 ggcgtgcggt agagcccgac catgaccacg gtgatcaggg tggcgagctc cagcccgacc
     1021 cacatcaaac cgatattgtt ggcgaccagg gcgaggttca tcgagcccat catcgcctgg
     1081 aacatggcat ggtagaatcg cacgaagccc ggcgacaggc ggccggtctc gatctcgtgt
     1141 ccgatatagg aggcactgaa cagcgccgcc gtgaagccga ccagggtgtt gatgccgatg
     1201 aagacgatgt tgaactcatc gacgatggca tagtcgccga cgcgatactc gcccgtcacc
     1261 agccagaggc ccgcggcaag ggtcgccgcg gaggcgatca cgttgacgac ggcgccgacg
     1321 cggtagcctg ggatcgccac gagcagcagc gccgccgcat agggcagcag caccacgagc
     1381 tgataggccg ggatcatcgg cgatccccgc gcatgcggtc gagcgcctcg atatcgacgg
     1441 tgtcgaagcg ctcgcggatg cggaagacga agaccgcgaa cacgaacagc gagatcagca
     1501 ccgagaaggc gacactgacc tcgaccacca gcggcatgcc gcgcgccccg gtagccgcca
     1561 ggatcaggcc gttctccatc gacatgaagc ccacgacctg ggtcaccgcg ttgcggcgca
     1621 cgatcatcat caggaagccc agcaggacga tggcgagcgc cagcgccagc tcctcgcggg
     1681 catggcttgc cgttcccgtc gccaccttga cgaccaaagc ctgggcaagg ccggtgagcg
     1741 ccaggccgac catcagcgcg acgcccacgc ccaccacctt ctcgacctca cggtggatgc
     1801 cgagccgggc gaccgtgcga tgcaacgcga cgggaatgac gatgcccttc agcgtgagcg
     1861 cgatcagcgc ggtgatgaac aggtccggcc gattgtccga ccaggccgcc caggcgacgg
     1921 aaagcgccag cgtgatcgac tgcgcggcaa aggcgttgag cacggcggca atgcgctcct
     1981 ggtagagcag cgcgaagctc gtcaccagca tcgcgccggc aagcaggtgg gagacctcgt
     2041 aggcctggtt cacgcgaaca ccccgcgcgt caggaacgcc agcaggatgg cgaggaagcc
     2101 gaacacgaag gcgatgccga cgaagtcggg caagcggaag acgcgcatct tggcgatgct
     2161 gacctcccac acgcctaaaa gcgcggcaga gcccagcagc ttggcgaccc aggccaacag
     2221 gccgatcgcc cagccggaga ggcccgccgc cgccggcgcc atgccgaacg gcgcgaacag
     2281 gcagatcagc agcgacaggt agagcaccag cttgaggtgg ctcgccgcct cgatcagggc
     2341 gaggtgacgc ccggaatact ccagcaccat ggcctcatgg accatggtga gctccagatg
     2401 ggtcatcgga ttgtcgaccg ggatgcgcgc attctcggcc agcgccacga tgaccagcgc
     2461 gatcagcgac agcgccatcg acacgcgcac ggcaaacggc tcggcgatga agaagtcggc
     2521 cacgccggcc agccgcgtcg tgccggcggc gatggccagc gtcaacacga tcagcatcat
     2581 ggcgggctcg gcgagcgtgg cgatcatcat ctcgcgcgac gagccgatgc cgccgaagct
     2641 ggtgccgaca tccatgccgg ccagcgccag cagggctcgg gccgctccca gcagggcgac
     2701 cagcgccacg acgtcggccg cccagttgaa catcagcccc gaggcgaagc tcggcaccag
     2761 ggccgcggct acccaggtca gcgcgaagat caggtatggc gcgctgcgga acagccagga
     2821 cgctccttcc gcgatcaccg attccttgcg caggagcttg gcgatatcga gatagccctg
     2881 ccgcagtggg gcgccctgcc ggcgcgtcag ccgtgccttg acgcgccgcg tgacgccgac
     2941 agcgagcggc gccagcagca
//
LOCUS       DASWGA010001016         4323 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_124697, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001016 DASWGA010000000
VERSION     DASWGA010001016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4323
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124697"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1164)
                     /locus_tag="VF991_23255"
     CDS             complement(<1..1164)
                     /locus_tag="VF991_23255"
                     /inference="COORDINATES: protein motif:HMM:TIGR02226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HEX9559429.1"
                     /translation="MLSLGAFAFAAPGMLALLLALPLIYWLLRMIPPLPRLVRFPAIR
                     LLIGLEPTEQTPMKMPWWLLLLRLLLATVLILAVARPLLNPQADLPGKGPLLLVIDDG
                     WSSAPGWTTRIAHAERLIQRAERAQRPVVLAGTAPAPIDAPAARKGAMRPDEARTLLR
                     AFRPKPWPTDRGAAVNTIDQMQVDPGAYAVWLSDGLEDDGAQKLTERLRRFDGLQVLL
                     PDQATTPLLLLPPSAEGRDLKVQALRPTADGPRKVAVQAGDDQGRTVARFDIDFAANA
                     TKGEGTLQAPVELRNRMARLDIEAQGGAGSTVLLDERHRRRPVSILGERPTATGQPLL
                     QEVYFLERALDPYVSLTIGDRETVLTRNTAVLLIPDGAAPSANDRDEIAKWIER"
     gene            complement(1409..2317)
                     /locus_tag="VF991_23260"
     CDS             complement(1409..2317)
                     /locus_tag="VF991_23260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEX9559430.1"
                     /translation="MTVAPSTLHRSLELAGTLPALMVAADRVAATVIQGVHGRRRVGQ
                     GDAFWQYRPYRDGDSASQIDWRQSARSRHLFVRETEWEAAASVWLWRDASPSMQYASL
                     KNIDTKAVRAELLTLALASLLADAGERVAVLGGGMRPTSGRVAVRRIAETLFDEAKAQ
                     TGGGRTPPSLPPLLPLPAHGTVVLVSDWLDPLDNIETIIRHYASGGVRGHLVQVLDPA
                     EEDLPFDGHVKFEGLEAEGQHTIRRVESVRTAYGARLAAQKEGLHRLTRSTDWTVHLH
                     RTDKPPQTVLLSLYLAMADMRRLSVA"
     gene            complement(2451..3416)
                     /locus_tag="VF991_23265"
     CDS             complement(2451..3416)
                     /locus_tag="VF991_23265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX9559431.1"
                     /translation="MADIERLGAQLRAARTAISKVIYGQQDVIDQTLVALLSGGHVLL
                     IGVPGLAKTLLVETLGVVLGMEAKRIQFTPDLMPADILGSEVMEETDAGRRSFRFIQG
                     PVFAQLLMADEINRASPRTQSALLQSMQEKHVTVAGNRHDLPAPFHVLATQNPLEQEG
                     TYPLPEAQLDRFLLQIDVGYPDESAERQIMIGTTGATMPTASQALTPADLIAAQSLVR
                     RLPIGESVVNAILNLVRAGRPESSDLDVVKQRVAWGPGPRASQAFMLASRARAIIQGR
                     LAPSVDDVVALSGPVLRHRMAVNFSARAEGITVETVIAQMCARLA"
     gene            3532..4158
                     /locus_tag="VF991_23270"
     CDS             3532..4158
                     /locus_tag="VF991_23270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEX9559432.1"
                     /translation="MTVDEIVRRVRARSERLASGLPVLTPPLGSDFSLNGVVPPPRSF
                     RPAAVLVPLVRREPGVTVLLTQRTDDMPSHAGQIAFPGGRPQAGDADAVATALRETEE
                     EVGLTRHFIDVIGSVDHYRTGTGYEITPVVGIVEPGFITRADPREVADVFEVPLEHFL
                     DEKNHRLASRVWQGRERFYYAMPYGERYIWGATAGMLKNLQFVLTADG"
BASE COUNT          649 a         1438 c         1571 g          665 t
ORIGIN      
        1 gcgctcgatc cacttggcga tctcgtcgcg gtcgttggcc gagggcgcgg caccgtcggg
       61 gatcagcagg accgcggtgt tgcgcgtcag cacggtctcg cgatcgccga tggtgaggct
      121 gacataggga tcgagcgcgc gctcgaggaa gtacacttct tgaagaagcg gctggccggt
      181 cgcggtcggc cgctcgccca ggatggagac cggccggcgg cgatgccgct cgtccagaag
      241 caccgtcgag ccggcgccgc cctgcgcctc gatgtcgagc cgcgccatgc ggttgcgcag
      301 ctcgaccggc gcctgcagcg tgccttcgcc cttggtcgcg ttggcggcga agtcgatgtc
      361 gaagcgggcc acggtgcggc cctggtcgtc gcccgcctgg acggcgacct tgcgcgggcc
      421 gtcggccgtc ggccgcagcg cctgcacttt caggtcgcgg ccttcggccg agggcggcag
      481 cagcaggagc ggcgtcgtcg cctggtcggg cagcaggacc tgcaggccgt cgaagcggcg
      541 caggcgttcg gtgagttttt gcgcgccgtc atcctccagg ccgtcgctca gccagacggc
      601 gtaggcgccg gggtcgacct gcatctggtc gatggtgttg acggcggcgc cgcggtcggt
      661 cggccagggt tttggcctga aggcgcgtaa aagcgtgcgc gcctcgtcgg gccgcatggc
      721 gcctttgcgc gccgccggcg catcgatcgg ggcgggggcg gtgccggcca gcacgaccgg
      781 ccgttgcgcg cgctcggcgc gctggatcag ccgctcggca tgggcgatgc gcgtcgtcca
      841 gcccggggca gacgaccagc cgtcgtcgat caccagcagc aacgggccct tgcccggcag
      901 gtcggcctgc ggattgagca gcggccgggc gaccgccagg atcagcacgg tggcgagcag
      961 caggcgcagc agcagcagcc accacggcat cttcatcggc gtctgttcag tgggctcgag
     1021 cccgatcagc agccggatcg ccggaaaccg caccagcctg ggcagcggcg ggatcatgcg
     1081 cagcagccaa tagatcagcg gcaacgccag cagcagcgcc agcatccccg gcgccgcaaa
     1141 agcgaaggcg ccgaggctta acatggggac acgcggacca acgactcaag ggtcctctcc
     1201 gccgcgcagc gggggagagg aagggacccg ttgcgaagca acggggaggt gaggtggtgc
     1261 ctcgtgcaaa gacgatgtgt ggggcgtgag gcgaagaccc acctcaccct ccccgcgctc
     1321 acgcgcgggt cccctccctc tccccccgct gcgcgggcgg agagggcttc cgaggggaga
     1381 cgccgggctg aaatgacgtt catcgccgtc acgccacgct cagccgacgc atgtcggcca
     1441 tggcgaggta gagcgacagc agcaccgtct gcggcggctt gtcggtgcgg tgcaggtgga
     1501 ccgtccagtc ggtcgagcgc gtcaggcgat gcaggccttc cttctgcgcc gccagccgcg
     1561 cgccataggc ggtgcgcacc gattcgacgc ggcggatggt gtgctggccc tcggcctcga
     1621 ggccttcgaa cttcacatgg ccgtcgaacg gcaggtcttc ctcggccgga tcgagcacct
     1681 gcacgagatg gccgcgcacg ccgccgctgg cgtagtggcg gatgatggtc tcgatgttgt
     1741 cgagcggatc gagccagtcg gagaccagca cgacggtgcc atgcgccggc agcggcagca
     1801 gcggcggcag gctgggcggc gtgcgccccc ctccggtttg ggccttcgcc tcgtcgaaca
     1861 gcgtttcggc gatgcgccgc acggcgaccc ggcccgaggt cggccgcatg ccgccgccca
     1921 gcaccgccac gcgctcgccg gcgtcggcta aaaggctggc cagcgccagg gtcaaaagct
     1981 cggcgcgcac cgccttggtg tcgatgttct tcagcgaggc gtactgcatg gagggcgagg
     2041 cgtcgcgcca cagccagacg ctggcggcgg cctcccattc ggtctcgcgc acgaagagat
     2101 ggcggctgcg cgcgctctgg cgccagtcga tctggctggc gctgtcgccg tcgcggtagg
     2161 gccggtactg ccagaacgca tcgccctggc cgacccgccg ccgtccatgc acgccctgga
     2221 tgacggtcgc cgccacccgg tcggccgcca ccatcaacgc cggcagggtg ccggcgagct
     2281 cgagcgagcg gtggagggtg gagggggcga cggtcatcgg attcccgagt cgtcctgagc
     2341 gtagcgaagg cctgccctga gcgtagccga agggacctca tcgccgcttg ccacggcatg
     2401 agatccttcg ctgcgctcag gatgactgac tacgcgaacg ctagccattc ttatgccaac
     2461 cgcgcgcaca tctgggcgat caccgtctcg accgttatgc cctcggcgcg ggcggagaag
     2521 ttcaccgcca tgcggtgacg caggacgggg ccgctcagcg ccacgacgtc gtcgacggaa
     2581 ggcgccaaac gcccctggat gatggcgcgg gcgcggctcg ccagcatgaa ggcctggctg
     2641 gcgcgcgggc cggggcccca ggcgacccgc tgcttcacga catcgagatc gctcgattcc
     2701 ggccggccgg cgcgcaccag gttcaggatg gcgttgacca cgctctcgcc gatcggcagg
     2761 cggcgcacca gcgactgggc ggcgatcagg tcggccggcg tcagcgcctg gctggcggtc
     2821 ggcatggtgg cgccggtggt gccgatcatg atctggcgtt cggcgctttc gtcggggtaa
     2881 ccgacgtcga tctgcagcag gaagcggtcg agctgggcct ccggcagggg ataagtgcct
     2941 tcctgctcca ggggattctg cgtcgccagc acatggaacg gcgccggcag gtcgtggcgg
     3001 ttgccggcca cggtgacgtg cttctcctgc atgctctgca gcagggccga ctgggtgcgc
     3061 gggctggcgc ggttgatttc gtcggccatc aggagctggg cgaacaccgg gccctggatg
     3121 aagcggaagg agcggcggcc ggcgtcggtc tcctccatca cctccgagcc taaaatgtcg
     3181 gcgggcatca ggtcgggcgt gaactggatg cgcttggctt ccatgcccag cacgacgccc
     3241 agggtttcga ccagcagggt cttggccagg cccggcacgc cgatcagcag cacgtgcccg
     3301 cccgacagga gtgctacaag ggtttgatcg atcacgtcct gctggccata aatgaccttg
     3361 ctgatggcgg tgcgggcggc gcgcaactgg gcacccagac gttcgatatc ggccaaggcg
     3421 gcaagggcgt cggcgtctga cgcggtcgaa gtgtctgggg ccaacggggc gctcctgtga
     3481 tcgaggggat tcggattgag ggaagcccag aattgaggcc ggaacaaggg catgacggtt
     3541 gacgaaatag tgcggcgggt gcgcgcacgc agcgagcgtt tggcatctgg tttgcccgta
     3601 ctaacacccc ctttgggcag cgacttctcc ctgaacggcg tcgtgccgcc gccgcgaagt
     3661 ttcaggccgg ccgccgtgct ggtgccgctg gtgcgccgcg agcccggcgt caccgtgctg
     3721 ctgacccagc gcaccgacga catgccgagc catgccggcc agatcgcctt tcccggcggc
     3781 cggccgcagg ccggcgatgc cgacgcggtg gcgacggcgc tgcgcgagac cgaggaggag
     3841 gtcggcctga cgcgacactt catcgacgtc atcggctcgg tcgatcatta ccgcaccggc
     3901 acgggctatg agatcacgcc ggtggtcggc atcgtggagc cgggattcat cacccgtgca
     3961 gacccgcgcg aggtcgccga cgtcttcgaa gtgcccttgg agcacttcct cgacgagaag
     4021 aaccaccggc tcgccagccg cgtctggcag ggccgcgagc ggttctacta cgccatgccc
     4081 tacggcgagc gctacatctg gggcgcgacg gcgggtatgc ttaaaaatct gcaattcgtc
     4141 ctcaccgcgg atgggtagag catgaacctt cattgctggg agcgcgccac tccagtggcg
     4201 ccgtcttctc tggggttcga caatgatgcg ccactggagt ggcgcgctcc cagctaagag
     4261 aagccccatg cgcgtcgtcc tgttggtgtt ggtcctggtg atggcgccga ccgccgcctt
     4321 ctt
//
LOCUS       DASWGA010001017         3078 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1644842, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001017 DASWGA010000000
VERSION     DASWGA010001017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3078
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1644842"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1072)
                     /locus_tag="VF991_23275"
     CDS             complement(<1..1072)
                     /locus_tag="VF991_23275"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559433.1"
                     /translation="MATDIRRRTLLAALGGTALSAGGAGTGWAKEYGPGVTDTEIKLG
                     TTSPYSGPASAYGVYGHAQTAYFQMINDQGGINGRKVNLISLDNGYNPPKALEQTRKL
                     VEDENVLAIAGFLGTAPNTSVQKYLNGKKVPSLFLTSGADRFNDPKTYPWIVPLYPTY
                     VGQGEIFGKFILAKHPAARIGVLYINDDLGKDFLLGLKKGLGDKAKTMIVREVSNELT
                     DPSIDSQIIDLKGAGADTLVQFTTSKFAAQGIRKAYDLGWRPVLHILASVSAAVGATL
                     VPAGLERSKGVVTARWEKHPTDSTTVGDPDVVEYVKFAKKYMPNLNIEDNTAVPGYIN
                     SFMIARVLKACGDNLTRDNVLKQ"
     gene            complement(1315..1944)
                     /locus_tag="VF991_23280"
     CDS             complement(1315..1944)
                     /locus_tag="VF991_23280"
                     /inference="COORDINATES: protein motif:HMM:NF036525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9559434.1"
                     /translation="MMQQLVSAVDNKATKADKTKARLIAVTKRLIQEHGSDRITLRSI
                     AAAARMEAGSIYYHFDSKDEIVRTVLESGVGGAREAVLRAIDEAGRDSPPLVRLRAAL
                     AAHLKYTIAEHFSSRLKAIRRLPKRLRDHHMKQEREYAAIFAGLLQEAHKKGQLRAGF
                     NLSVVRMLCMGALTWVAEWYDPAGPMSPDDVADELMRLLGGGIVKPNKP"
     gene            complement(1966..2976)
                     /locus_tag="VF991_23285"
     CDS             complement(1966..2976)
                     /locus_tag="VF991_23285"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9559435.1"
                     /translation="MATSGLIDVHSHIVPRALPGDPTGGGIDKWPCVQCKSPTAGTVL
                     MGAKPFREIDERSWDVGRRLADMDRDQVAAQVLSPMPELLSYWIDTAPATELARYING
                     AIAEMVTKRPDRFHGLGSVPLQDPERAAEELRLVKERFGLRGVEVGSNINGRYLGERR
                     FDPFFAAAEELGLAVFVHSLHPLQAPHLAATPNLVPFAAFPVDTALCAASMIMAGVPE
                     RFPRLRFGFSHGGGTLAPILHRLEHGWRATKGFEGKLPQSPKSYAARFYYDSLVYEAA
                     YLAHLANHIAPGQIFAGTDYPYLIEQREPAAFIASVADTVARGDTLWSDAAQRFLGLD
                     AA"
BASE COUNT          490 a          955 c         1063 g          570 t
ORIGIN      
        1 cctgcttcag gacgttgtcg cgcgtgagat tgtcgccgca ggccttcagg acgcgggcga
       61 tcatgaatga attgatgtag cccggcaccg ccgtgttgtc ctcgatgttg aggttcggca
      121 tgtatttctt ggcgaacttc acgtactcga cgacatcggg atcgccgacc gtcgtcgaat
      181 cggttgggtg cttctcccag cgcgccgtga cgactccctt cgagcgctcg aggcccgcgg
      241 gaaccagcgt ggcgccgacg gcggccgaga cgctggcgag gatgtggagg accggccgcc
      301 agccgaggtc gtaggccttg cggatgcctt gggcggcgaa cttcgaggtc gtgaactgca
      361 ccagggtgtc ggcgccggcg cccttgagat cgatgatctg gctgtcgatg ctgggatcgg
      421 tcagctcgtt gctgacttcc cgcacgatca tcgtcttggc cttgtcaccg aggcccttct
      481 tcaggccgag caggaaatcc ttgccgagat cgtcgttgat gtagagcacg ccgatcctgg
      541 cggcgggatg cttggcgagg atgaacttgc cgaagatctc gccctgcccg acgtaggtcg
      601 gatagagcgg cacgatccag ggataggtct tgggatcgtt gaagcggtcg gcgcccgagg
      661 tgaggaacag gctcggcacc ttcttgccgt tgagatactt ctgcaccgag gtgttgggtg
      721 ccgtgccgag gaaaccggcg atggccagca cgttctcgtc ctccacgagc ttgcgcgtct
      781 gctcgagcgc cttgggcgga ttataaccgt tgtcgagcga gatcaggttg accttgcggc
      841 cgttgatgcc gccctggtcg ttgatcatct ggaagtaggc cgtttgggca tggccgtaga
      901 cgccataggc cgacgcgggt ccgctatagg gcgatgtcgt gccgagcttg atttccgtat
      961 cggtgacgcc tggaccgtac tccttggccc agccggtacc ggccccgccg gccgacaatg
     1021 ccgtgccgcc gagcgcggcc agcagcgtgc gtcgcctgat gtctgtcgcc atgtcgtcct
     1081 cccggtttcc ccgatgatcg accgcgggtc gggcaggcgc aagaaaaatc taacaagtgg
     1141 tagatatttt tatcggtgcg tctttgctgg ggcgcgccac tccagtggcg cgtcatggtc
     1201 ttccggaccg cgagcctccg gctcgctcat gatcacgagc gcgcaagatg cgcgcggtcc
     1261 acatgagcat gagaagaccg cgccactgga gtggcgcgcc cccagcaatg agccctatgg
     1321 cttgttcggc ttgacgatgc cgccgccgag aaggcgcatc agctcgtcgg cgacgtcgtc
     1381 gggcgacatc ggcccggccg gatcgtacca ttcggcgacc caggtcaggg cgcccatgca
     1441 gagcatgcgc accaccgaca ggttgaagcc ggcgcgcagc tgacccttct tgtgcgcctc
     1501 ctgcaagagg ccggcgaaga tggcggcgta ctcgcgctcc tgcttcatgt gatggtcgcg
     1561 caatcgcttg ggcagccgcc tgatggcttt cagccgcgac gaaaagtgtt cggcgatggt
     1621 gtatttcaga tgagccgcca gggcggcacg caggcgcacc agcggcgggc tgtcgcgtcc
     1681 ggcctcgtcg atcgcccgca ggaccgcctc gcgggcaccg ccgacgccgc tttcgagcac
     1741 ggtgcggacg atctcgtcct tggaatcgaa gtgatagtag atgctgccgg cctccatgcg
     1801 ggccgctgcg gcgatgctgc gcagggttat gcggtcggag ccatgttcct ggatgaggcg
     1861 tttggtgacc gcgatcaggc gggctttggt cttgtctgcc tttgtcgcct tattatccac
     1921 ggcgctgacg agttgctgca tcatttcaaa gcctatagga gcgcctcagg ctgcgtccag
     1981 cccgaggaag cgttgggctg cgtcggacca cagcgtgtcg ccgcgggcga cggtgtcggc
     2041 gacgctggcg atgaaggcgg ccggctcgcg ctgctcgatg agatagggat agtccgtgcc
     2101 ggcgaagatc tgccctggcg ctatatggtt ggcgagatgc gcgagatacg ccgcctcgta
     2161 aaccaggctg tcgtagtaga agcgtgcggc atagcttttg ggcgactggg gcaacttgcc
     2221 ttcgaagccc ttggtggcgc gccagccatg ctccaaccga tgcaggatcg gcgccaaggt
     2281 gccgccgccg tggctgaagc cgaagcgcag gcggggaaag cgctccggca cgcccgccat
     2341 gatcatgctg gccgcgcaca aggcggtgtc gacgggaaag gcggcaaaag gcaccaggtt
     2401 gggcgtcgcc gccagatgcg gcgcctgcag cgggtgcagc gaatgcacga acacggcgag
     2461 cccgagttcc tcggccgcgg cgaagaacgg gtcgaaccgc cgttcgccga gatagcggcc
     2521 gttgatgttg ctgccgacct cgacgccgcg gagcccgaag cgctccttga ccagccgcag
     2581 ttcctcggcc gcgcgctcgg gatcctgcag gggcacgctg cccaggccgt ggaagcgatc
     2641 gggccgcttg gtcaccatct cggcgatcgc cccgttgatg tagcgggcca gctcggtcgc
     2701 gggcgcggtg tcgatccagt aggacagcag ctcgggcatc ggcgagagca cctgcgccgc
     2761 cacctggtcg cggtccatgt cggccagccg gcggccgacg tcccacgacc tctcgtcgat
     2821 ctcgcggaac ggcttggcgc ccatcaggac agtgcccgcg gtcgggctct tgcactgcac
     2881 gcacggccat ttgtcgatgc cgccgccggt cgggtcgccc ggcagcgcgc gcggcacgat
     2941 atgcgaatgc acatcgatca gaccggaggt ggccacggcg atcagatgat gatggtgagc
     3001 ttgccgggat agagcatgtc catgcccagc accgagcgct tggacttgat cttccagggg
     3061 ctcgccgtgc agtcgatg
//
LOCUS       DASWGA010001018         1869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_124828, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001018 DASWGA010000000
VERSION     DASWGA010001018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124828"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VF991_23290"
     CDS             <1..573
                     /locus_tag="VF991_23290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide synthetase C
                     domain-containing protein"
                     /protein_id="HEX9559436.1"
                     /translation="VFDDAMQKRTMDEIILPTVRAMAEAGTPFKGVLYAGLMITDQGP
                     KIFEYNCRFGDPECQVLMMRLKSDILPALIASADGGLKHFDLRWSADTALTVVMAAKG
                     YPDAYQKGSEIRGLDAAGKVEGVEIFHAGTKADGSRVLANGGRVLNVSAVAPTVEEAR
                     ARAYRAVDLIDWPEGFCRRDIAWRAVGRRP"
     gene            606..1733
                     /locus_tag="VF991_23295"
     CDS             606..1733
                     /locus_tag="VF991_23295"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9559437.1"
                     /translation="MLDSADQSQRLLAQLRFPCGEVPEPGTIKNVAPGIYWLRMPLPF
                     QLNHINLWLVEEKTGWTIVDTGINTQATRELWEKIFAEKLLGKPVTRVIATHLHPDHV
                     GLAGWLCERWDAPLWMTLGEYMSAIAARNDFIENEDLRAAHLKRNGVPADRIQLFHRH
                     KGGYAKGVVPLPPSFERLIHAHPITLGGHRWDVIVGRGHAPEHASLWCPELNVLIAGD
                     QVLPKISTNVGVWPNEPRADALTWFLDGFSRFRRLPANALVLPSHGFPFIGLHTRLDQ
                     LVAHHDARLNDMIAAIAQRGVEGATGWDMVPVLFPRHLDNNQIVFAFGETLAHLHCLE
                     TRARVKRVVEGGVHRFVALVDANAEPPADDSDADVMDVGTA"
     gene            complement(1738..>1869)
                     /locus_tag="VF991_23300"
     CDS             complement(1738..>1869)
                     /locus_tag="VF991_23300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018483516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9559438.1"
                     /translation="WCFQANTRARRFYEARGFRAICFTDGADNEEKMPDVRYRWQRT"
BASE COUNT          312 a          643 c          605 g          309 t
ORIGIN      
        1 gtattcgacg acgccatgca gaagcgcacc atggacgaga tcatcctgcc cacggtgcgc
       61 gccatggccg aggccggcac gccgttcaag ggcgtgctct atgccggcct gatgatcacc
      121 gaccagggcc cgaaaatctt cgagtacaac tgccgcttcg gcgatcccga gtgccaggtg
      181 ctgatgatgc ggctcaagtc cgacatcctg ccggcgctga tcgcctcggc cgacggcggg
      241 ctaaagcatt tcgacctgcg ctggtcggcc gacacggcgc tcaccgtggt gatggcggcc
      301 aagggctatc ccgatgccta tcaaaagggc agcgagatcc gcggcctcga cgcggcgggc
      361 aaggtcgaag gcgtggagat ttttcacgcc ggcacgaaag ccgatggctc acgtgtcctg
      421 gccaatggcg ggcgggtgct gaacgtgagc gccgtggcgc cgaccgtcga ggaggcgcgg
      481 gcgcgggcct atcgtgccgt cgacctgatc gactggccgg aaggcttttg ccggcgcgat
      541 atcgcatggc gggcggtcgg ccggcggccg tgacacgccg ccatcgccgg ggctagggtc
      601 gatccatgct cgattctgcc gatcaatccc agcgcctgct ggcgcaactg cgctttccct
      661 gcggcgaggt gcccgaaccc ggcaccatca agaatgtcgc gcccggcatc tactggctgc
      721 gcatgccgct gcccttccag ctcaaccaca tcaacctgtg gctggtcgaa gaaaagaccg
      781 gctggaccat cgtcgacact ggcatcaaca cgcaggctac gcgcgagctg tgggagaaga
      841 tcttcgccga aaagcttctg ggcaagccgg tgacgcgggt gatcgccacc cacctgcatc
      901 ccgatcatgt cgggctggcg ggctggctgt gcgagcgttg ggatgcgccg ctctggatga
      961 cgctgggcga atacatgagc gccatcgccg cgcgcaacga cttcatcgag aacgaggacc
     1021 tgcgcgccgc ccatctcaag cgcaacggcg tgccggccga tcgcatccag ctgttccacc
     1081 gccacaaggg cggctacgcc aagggcgtgg tgccgctgcc cccgtccttc gagcgcctga
     1141 tccacgctca tccgatcacg ctgggcggcc atcgctggga cgtcatcgtc ggccgcggcc
     1201 acgcgcccga gcatgcctcg ctgtggtgcc ccgagctcaa cgtgctgatc gcgggcgatc
     1261 aggtgctgcc caagatcagc accaatgtcg gcgtatggcc caacgagccc agggccgacg
     1321 cgctcacctg gttcctcgac ggcttctcgc gcttccgtcg cctgccggcc aacgcgctgg
     1381 tgctgccttc gcacggcttc ccgttcatcg gcctgcacac caggctcgac caactcgtgg
     1441 cccaccatga tgcgcgcctg aacgacatga tcgccgccat cgcccaacgc ggcgtcgagg
     1501 gcgcgaccgg ctgggacatg gtgccggtgt tgttcccgcg ccatctcgac aacaaccaga
     1561 tcgtgttcgc ctttggcgag accttggcac atctccattg cctggaaacc cgcgcgcgcg
     1621 tgaagcgggt cgtcgaaggc ggcgtgcacc gcttcgtcgc cctggtcgat gccaacgccg
     1681 agccgccggc cgacgattcg gacgccgacg tgatggatgt cggcacggcc tagcgtgcta
     1741 cgtccgctgc cagcgatagc gaacgtcggg catcttttcc tcgttgtccg cgccatcggt
     1801 gaagcagatc gcgcgaaagc cgcgcgcctc gtagaagcgg cgcgcccgtg tattggcctg
     1861 aaagcacca
//
LOCUS       DASWGA010001019         2873 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1891989, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001019 DASWGA010000000
VERSION     DASWGA010001019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1891989"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2360
                     /gene="mutS"
                     /locus_tag="VF991_23305"
     CDS             <1..2360
                     /gene="mutS"
                     /locus_tag="VF991_23305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX9559439.1"
                     /translation="ERAVVRVITPGTLTEDALLDARSHNYLAAIAEAQGELALAWLDL
                     STADFATQPLLASQLAAALARLAPGEVLVPDRLLAREPVKLALEEWNAVLTPLPSARF
                     DSDNARKRLQAAFNVAALDSFGSYSRAEVAACGALLDYVELTQAGKLPALAPPRRQRA
                     DGTMEIDPATRRNLELVRGLDGRRDGSLLATIDRTLTGPGARLLAERIAAPLTERVEI
                     ERRLDLVQLFVERPAVRERVREALRRTPDIERALQRLSVGRGGPRDLSALRDGLDSGE
                     ALAAALRAEPEALAPPPAPLAEIVAACSDHRPLIDALGAALADEPPLFARDGGFIRAG
                     YRTELDEQRTLRDDSRKTVAALEAKYRTSSGVPSLKIRHNNMIGYHIEVTATHADKLD
                     LAALGFTRRQSMANATRFSTSELADLETRIGRAADQALALELAIFDELAAKVMAVSAA
                     VAAAGRALAALDVAAALAELAARENYVRPALSDETDFVIEGGRHPVVEAALQRQSSAG
                     GGAGFVPNDCDLGIERRLWLLTGPNMAGKSTFLRQNALIAVMAQAGSFVPAKQATIGI
                     VDRLFSRVGAADDLARGRSTFMVEMVETAAILNQATARSLVILDEIGRGTATFDGLSI
                     AWATLEHLHDVNRCRALFATHFHELGALKERLAGLAPYTMRVKEWQNEVVFLHEVAPG
                     AADRSYGIHVAQLAGLPAAVVARAEQVLAALEKGEQSGAVSRLADDLPLFAAAPARPA
                     GGVAKSQESEVEKALAEVNPDELTPREALELLYALRVRSRMPRNG"
     gene            complement(2318..>2873)
                     /locus_tag="VF991_23310"
     CDS             complement(2318..>2873)
                     /locus_tag="VF991_23310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559440.1"
                     /translation="LIYAMFLDRWIKESLLEGASPCDEVDELRRSTIAVRFLTFAAVL
                     CLLATALALVVPFELALVPCVVVASLFVLILPGLAAAEPISLSQAFALGRRLQLPLLL
                     LIGGALALSVLAEIGLHWGAGYLPAKPWNAAAVAAGHRLIDCLLLAFVGYALAAIFRQ
                     LTDWQQPESEDHPFRGMRLRTRKA"
BASE COUNT          449 a         1013 c         1005 g          406 t
ORIGIN      
        1 tcgagcgcgc cgtggtgcgg gtcatcacgc ccggcacgct gaccgaggat gcgctgctcg
       61 acgcgcgcag ccacaactac ctggcggcga tcgccgaggc ccagggcgag ctggcgctgg
      121 cctggctcga tctgtcgacc gccgacttcg ccacccagcc gttgctggca agccagcttg
      181 cggctgccct ggcgcggctg gcgccgggcg aggtgctggt gcccgaccgc ctgctggcgc
      241 gcgagccggt gaagctggcg ctggaagaat ggaacgcggt gctgacgccg ctgccctcgg
      301 cgcgcttcga cagcgacaac gcgcgcaagc gcctgcaggc ggccttcaac gtcgccgccc
      361 tcgacagctt cggctcgtac tcgcgcgccg aagtcgcggc gtgcggcgcg ctgctcgact
      421 atgtcgaact cacccaggcc ggcaaattgc cggcgctggc gccgccgcgc cgccagcgcg
      481 ccgacggcac gatggagatc gacccggcga cgcggcgcaa tctcgagctg gtgcgcggcc
      541 tcgacggccg gcgcgacggc agccttttag ccaccatcga tcgcaccctg accggtcccg
      601 gcgcccgcct tttagccgag cggatcgccg cgccgctcac cgagcgggtc gagatcgagc
      661 gtcgcctcga cctggtgcag ctgttcgtcg agcggccggc cgtccgcgaa cgcgtgcgcg
      721 aggcgctgcg ccgcacgccc gacatcgagc gcgcgctgca gcggctgtcg gtcggccgcg
      781 gcggtccgcg cgatctttcg gccctgcgcg atggcctcga ctcgggcgag gcgctggccg
      841 ctgccttgcg cgccgaaccc gaggcgctgg cgccgccgcc ggcgccgctg gcggaaatcg
      901 tcgcggcctg ctccgatcac cgaccgctga tcgatgcgct gggcgccgcc ctggccgacg
      961 agccgccctt gttcgcgcgc gatggcggct tcatccgtgc cggttaccgg accgagctcg
     1021 acgagcagcg caccctgcgc gacgacagcc gcaagaccgt ggccgcgctc gaggccaagt
     1081 accggacctc gagcggcgtg ccgtcgctga aaatccggca caacaacatg atcggctatc
     1141 acatcgaggt gacggcgacg cacgccgaca agctcgatct cgcggcgctg ggcttcaccc
     1201 gccgccaatc gatggccaat gccacgcgct tcagcacatc agagcttgcc gatctcgaaa
     1261 cccgcatcgg ccgtgccgcc gaccaggcgc tggcgctgga gctcgcgatc ttcgatgagc
     1321 tggccgccaa ggtgatggct gtctcggccg ccgtcgccgc cgccggccgc gcgctggccg
     1381 cactcgatgt cgcggcggcg ctggccgaac tggcggcccg cgagaactac gtacggccgg
     1441 cgctgagcga tgagactgac tttgtcatcg agggcggccg ccatcccgtg gtcgaggcgg
     1501 cccttcagcg ccaaagcagc gcgggcggcg gcgccgggtt cgtgcccaat gattgcgatc
     1561 tcggcatcga gcgccggctg tggctgctga ccggtcccaa catggcgggc aagtcgacct
     1621 tcctgcgcca gaacgccctg atcgccgtga tggcgcaagc cggctccttc gttccggcga
     1681 aacaggcgac catcggcatc gtcgatcgcc tgttcagccg cgtcggcgcg gccgatgacc
     1741 tggcgcgcgg ccgctcgacc ttcatggtcg agatggtcga gacagcggcg atcctcaatc
     1801 aggcgacagc cagaagcctg gtcattctcg acgagatcgg ccgcggcacc gccaccttcg
     1861 acgggctctc gatcgcctgg gcgacgcttg agcatctgca cgacgtcaat cgctgccgtg
     1921 ccctgtttgc cacccacttc cacgagcttg gcgcgctcaa ggagcggctg gccgggctcg
     1981 cgccctacac catgcgggtc aaggaatggc agaacgaagt ggtgttcctg cacgaagtgg
     2041 cgccgggcgc cgccgaccgc tcctacggta tccatgtcgc ccagctcgcc ggcctgccgg
     2101 ctgctgtggt ggcgcgcgcc gagcaggtgc tggcggcgct ggagaagggc gaacagtcgg
     2161 gcgcggtgtc gcgactggcc gacgacctgc cgctgtttgc cgcggcgccg gcccgtccgg
     2221 cgggcggcgt ggccaagtct caggaatccg aagtcgagaa ggcgctggcc gaggtcaacc
     2281 ccgacgagct gacgccgcgc gaggcgctgg agctgctcta tgccttgcgc gtgcgcagcc
     2341 gcatgccgcg gaacggatga tcctctgatt cgggctgctg ccagtcggtc aactggcgga
     2401 agatcgccgc cagcgcatag cccacgaagg ccaacagcag gcaatcgatc agccggtggc
     2461 cggcggcgac ggccgcggcg ttccagggct tggcgggcag gtagccggcg ccccagtgca
     2521 ggccgatttc ggccagcacc gaaagcgcta gtgcgccgcc aatcagcaac aagagaggga
     2581 gttgtagcct ccgtcccaag gcaaaggcct ggctgagtga gatcggctcg gcggctgcaa
     2641 ggccgggaag gatcagcacg aacagggagg cgacgactac acagggcacc agtgccagtt
     2701 cgaaaggtac gacaagggcc aacgccgtcg ccagcaggca gaggaccgcg gcaaaggtga
     2761 ggaaacgcac ggcgatggtc gaacggcgca gctcgtcgac ttcatcgcac gggcttgcgc
     2821 cctcgagcag cgattccttg atccagcgat cgagaaacat ggcgtagatc agc
//
LOCUS       DASWGA010001020         6365 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_488863, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001020 DASWGA010000000
VERSION     DASWGA010001020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6365
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488863"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..970)
                     /locus_tag="VF991_23315"
     CDS             complement(<1..970)
                     /locus_tag="VF991_23315"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9559441.1"
                     /translation="MPVRVIGMIGVAPPGGDATVHVIKGGISPPYLRAFAQAHDAAGF
                     DLALVGYTASSAEGFLVAQYAAQHTQRLGFLIAHRPGFVAPTLAARKIATFDHLTDGR
                     IALHIISGASDAEQEGDGDFAPKEERYRRAAEYIELMKLAWTSERRFDFTGQFYRVRG
                     AKSDVQPLQKPHPLIFFGGSSEGALAMGSRHCDVFAMFGEPLAATAQRIAEFRARAAT
                     HGRSPTFNMSFRPILGATEGAAWDRARKILASIQKPGDPTGFGNDKKPLDQSARRLLD
                     FAAQGETHDERLWMPIAEATGAMGNTSCLVGTPEQVARALLEYYKLG"
     gene            complement(1037..1990)
                     /gene="senB"
                     /locus_tag="VF991_23320"
     CDS             complement(1037..1990)
                     /gene="senB"
                     /locus_tag="VF991_23320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012457150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenoneine biosynthesis selenosugar synthase
                     SenB"
                     /protein_id="HEX9559442.1"
                     /translation="MKIVLITPAGPTSRTGNRITASRWARILRRLGHRVSLAADYDGR
                     PADLMVAIHAWRSAGSIERFKAGHPTQPVVLLLSGTDIYHDIASDPVPTLRSMALADR
                     LVALNDLAWRVVPKRLRARLSVIRQSAAPLPRPRRPDHRAVVVSVIGHLRDVKDPLRA
                     AEAARLLPAESCVRIEQVGRAYTPEWATRARAEMAANPRYFWHGDVSAAAVRRLLARS
                     HAMVISSSSEGGANVVSEAVVAGVPVLASRMDGNVGLLGGDYPGYFPVGDTAALARLL
                     GRLEREPRFVKRLRQALARRVALFRPSREIAAWRRLLAELQ"
     gene            1989..3311
                     /gene="senA"
                     /locus_tag="VF991_23325"
     CDS             1989..3311
                     /gene="senA"
                     /locus_tag="VF991_23325"
                     /inference="COORDINATES: protein motif:HMM:NF041186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1903257 - selenoneine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenoneine synthase SenA"
                     /protein_id="HEX9559443.1"
                     /translation="MDHRPADRPTSGASAAELVAQLREARHRTRRLTEDLSLAELMGP
                     RLDIVNPVLWEIGHVGWFHEFWTLRHAHGGAPLIERADRLWDSSTVAHATRWQLDLPD
                     RAGTFGYLADVLARQEDRLGGAVDDAQRYFYELAIRHEDMHVEALAYSRQTLAYAPPQ
                     ALGDPRRPAAGAWPGDAAVPGGTWRLGSTGADGFVFDNEKWAHDTVLSPFRIARAPVT
                     NAQFAAFVDAGGYDAREFWSDAGWAWRQRSNAERPVYWQPKRDGVWSARRYRTIEEPA
                     PHQPVMFVAWFEAEAWCRWAGRRLPSEAEWEAAAIGLPAGNGARLADARRRWPWGDAS
                     PTPDRANLDDAFDGPVDVAACAAGDSAFGCRQMIGNVWEWTASDFLPFAGFAADPYKD
                     YSQPWFGTRKVLRGGCWATSARIARPAYRNFFTPDRNDVFAGFRTCAL"
     gene            3443..3661
                     /locus_tag="VF991_23330"
     CDS             3443..3661
                     /locus_tag="VF991_23330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018329745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin"
                     /protein_id="HEX9559444.1"
                     /translation="MATNRTYVKTEVVGSSDKSVSDAIESAIAVASRSLRNLEWFEVV
                     DVRGSIRDNKVANYQVTLKLGLRYEAKA"
     gene            3779..5011
                     /locus_tag="VF991_23335"
     CDS             3779..5011
                     /locus_tag="VF991_23335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate dehydrogenase
                     (2-methylpropanoyl-transferring) subunit alpha"
                     /protein_id="HEX9559445.1"
                     /translation="MPDAKPLSFQVPAPAVRPGGTPDFSDVRISRAGEVRRPDVDAAP
                     EDIRDLAYAIIRVLNRESEAVGPWAGLLSDAELLEGLRHMMTLRIFDARMQMAQRQGK
                     TSFYMQHMGEEAVSCAFRKALEPGDMNFPTYRQAGLLIAGGYPMLDMMCQIYSNELDP
                     MKGRQLPVLYSAREHGFFSISGNLATQFIQAVGWAMASAMKRDTRIAVGWIGDGSTAE
                     SDFHAGLVFASTYKAPVVLNIVNNQWAISTFQGIARGGSGTFAARGLGFGLPALRVDG
                     NDYLAVHAVAKWAIERARRNLGPTLVEYVTYRVGAHSTSDDPSAYRPKTESDAWPLGD
                     PVLRLKGHLILRGIWSEERHKQAEAEILAEVIAIQKEAESHGTLHSGPHPSARDMFEG
                     VYEQMPPHLRRQRQQAGV"
     gene            5015..6028
                     /locus_tag="VF991_23340"
     CDS             5015..6028
                     /locus_tag="VF991_23340"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEX9559446.1"
                     /translation="MPRKTMVEAIRDAMDVAMQRDDNVVVFGEDVGYFGGVFRCTQGL
                     QQKFGASRCFDTPISELGIVGAAVGMAAYGLRPCVEIQFADYMYPAYDQIVSEAARLR
                     YRSNGQFTAPMVVRMPTGGGIFGGQTHSQSPEALFTHVAGLKTVVPSNPYDAKGLLIA
                     SIEDNDPVIFLEPKRLYNGPFDGHHERPVTPWARHPLGEVPEGHYTVPLGKAAVRREG
                     AAVTVLAYGTMVFVAEAAAAETGIDAEIIDLRTLVPYDLDTIAASVEKTGRCVVVHEA
                     TLTSGFGAELSALVQENCFYHLEAPVVRVTGWDTPYPHAQEWDYFPGPARVGRALKAV
                     MEA"
     gene            6030..>6365
                     /locus_tag="VF991_23345"
     CDS             6030..>6365
                     /locus_tag="VF991_23345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018235744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX9559447.1"
                     /translation="MGIRIIKLPDVGEGVAEAEMVEWHVEVGQSVLEDQLLAAVMTDK
                     ATVEIPSPVAGTVVALGAEVGGVVAVGAELVRLEVAGEGNEEVSAAPREAAATAPAEK
                     PAAPAPAPVP"
BASE COUNT          998 a         2133 c         2234 g         1000 t
ORIGIN      
        1 tgccgagctt gtagtattcg agcaaggcac gcgcgacctg ctcgggcgtg ccgaccaggc
       61 acgacgtgtt gcccatcgcg cccgtcgcct cggcgatggg catccacagc cgctcgtcat
      121 gcgtctcgcc ttgcgccgcg aagtcgagca ggcgccgcgc cgactggtcg agcggcttct
      181 tgtcgttgcc gaagccggtc ggatcgccgg gcttctggat cgacgccagg attttacgcg
      241 cgcgatccca ggcggcaccc tcggtggcgc cgaggatcgg ccggaacgac atgttgaagg
      301 tgggcgagcg gccatgggtg gcggcccgtg cgcggaactc ggcgatgcgc tgggcggtgg
      361 cggcgagcgg ctcgccgaac atggcgaaca cgtcgcagtg cctggatccc atcgccagcg
      421 cgccttccga cgagccgccg aagaaaatca gcggatgcgg cttctgcagc ggctgcacgt
      481 cggatttcgc gccgcgcacg cgatagaact ggccggtgaa gtcgaagcgg cgctcgctcg
      541 tccaggcgag cttcatgagc tcgatatact cggccgcgcg gcgatagcgc tcttccttgg
      601 gcgcgaagtc gccgtcgcct tcctgctcgg cgtcgctcgc gccggagatg atgtgcaagg
      661 cgatccgccc gtcggtcagg tgatcgaagg tcgcgatctt gcgcgccgcc agggtcggcg
      721 cgacgaagcc cggccggtgc gcgatcagga agccgagccg ctgggtgtgc tgggcggcat
      781 actgggcgac caaaaatcct tcggccgagg aggcggtgta gccgaccagt gccaggtcga
      841 agcccgccgc gtcatgcgcc tgggcaaatg cccgcagata gggcggggag atgccgcctt
      901 tgatgacatg gacagtcgcg tcgccgccgg ggggcgcgac gccgatcata ccgatcaccc
      961 gtacgggcat gctgtcctcc gctcttcacg gcctgtcgat tgccgcaatg ctatcctgat
     1021 tccggcatcg aagaaatcac tgcaactcgg cgagcaggcg gcgccacgcg gcgatttcgc
     1081 ggctcggcct gaacaaggcc acccgtcgcg ccagcgcttg gcgcagtcgc ttgacgaagc
     1141 gcggttcgcg ctcgaggcgt cccaacagcc gggcgagggc tgccgtgtcg ccgaccggga
     1201 agtagccggg atagtcgccg cccagcaggc cgacattgcc atccatgcgc gaggccagca
     1261 ccggcacgcc ggcgacgacg gcttccgaga cgacgttggc gccgccttcg ctcgatgagg
     1321 agatgaccat ggcgtggctt cgcgccagca gccggcgcac ggcggcggcc gatacgtcgc
     1381 cgtgccagaa gtagcgcgga ttggcggcca tttcggcccg cgcccgggtg gcccattccg
     1441 gcgtgtaggc gcggccgacc tgctcgatgc gcacgcagct ctcggccggc agcaggcgcg
     1501 ccgcttcggc cgcgcgcaat ggatccttga cgtcgcgcaa atggccgatc accgacacga
     1561 cgaccgcgcg gtggtccggt cgacgcgggc gcggcagtgg cgcggccgat tgacggatga
     1621 cgctaagccg cgcccgcagc cgcttgggga cgacgcgcca ggcaagatcg ttcagcgcca
     1681 ccagccggtc cgccagcgcc atcgaccgca gggtcgggac cggatcgctg gcgatgtcgt
     1741 ggtagatgtc ggtgccgctc agcagcagga ccaccggctg cgtcgggtgc ccggccttga
     1801 agcgctcgat cgagccggcg ctccgccagg cgtgaatggc caccatcaaa tcggcgggcc
     1861 ggccgtcata atccgcggcg aggctcacgc gatggccgag gcgacgcagg atgcgcgccc
     1921 agcgcgaggc ggtgatgcga ttgccggtgc gtgaagtggg gcccgcgggt gtgataagga
     1981 cgatcttcat ggaccatcgc cctgccgacc ggccgaccag cggtgcttcc gcggccgaac
     2041 tcgtggcgca actgcgcgag gcccgtcatc gcacccggcg gttgacggaa gatctgtcat
     2101 tggccgaatt gatgggcccg cgcctggaca tcgtcaatcc cgtgctctgg gaaataggcc
     2161 atgtcggctg gttccatgaa ttctggacgc tgcgccacgc ccatggcggc gcgccgttga
     2221 tcgagcgcgc cgaccggctg tgggattcga gcacggtagc gcacgccacg cgctggcagc
     2281 tcgacctgcc cgaccgcgcc ggcacgttcg gctacctggc ggacgtgctg gcccgtcagg
     2341 aggaccggct gggtggcgcg gtcgacgacg ctcagcgcta tttctacgag ctcgccatcc
     2401 gtcatgaaga catgcatgtc gaggcgctcg cctattcgcg ccagacgctc gcctatgcgc
     2461 cgccgcaggc cctgggcgat ccacggcgtc cggcggcggg cgcctggccg ggcgacgcgg
     2521 ccgtgccggg cggaacgtgg cggctgggct cgacgggagc cgacggtttt gttttcgaca
     2581 acgagaagtg ggcgcacgac accgtcctgt cgccgttccg gatcgcccgc gcgcccgtca
     2641 ccaacgccca gttcgcagcc ttcgtcgacg ccggcggtta cgacgcgcgg gaattctgga
     2701 gcgacgccgg ctgggcgtgg cgccagcgca gcaacgccga gcgaccggtc tactggcagc
     2761 ccaagcgcga cggcgtgtgg agcgccaggc gctatcgtac gatcgaggaa ccggcgccgc
     2821 atcagccggt catgttcgtg gcctggttcg aggccgaggc gtggtgccga tgggccggac
     2881 ggcgcttgcc gagcgaagcc gaatgggagg ccgctgccat cggcctgccg gctggcaacg
     2941 gtgcacgcct ggccgacgct cgccgccgct ggccgtgggg cgacgcatcg cccacacccg
     3001 atcgcgccaa tctcgacgac gccttcgacg ggccggtcga tgtcgcggcc tgcgccgcgg
     3061 gcgacagcgc cttcggctgc cgccagatga tcggcaacgt ttgggaatgg acggcgtcgg
     3121 acttcctgcc cttcgcgggc ttcgccgccg atccctacaa ggactattcg cagccctggt
     3181 tcggcacgcg caaggtgctg cgcggcggct gctgggcgac cagcgcgcgc atcgcccggc
     3241 cggcctaccg caacttcttc acgcccgacc gcaacgacgt cttcgccggc tttcgcacct
     3301 gcgcactgtg agccgccgac ggtaccccag gcaactccca gccgatcgcg cgactgctgc
     3361 ttgccggcat gctcgcgcga tcggcaagtt cgcgataggc tctgggttgg agtcgcaggc
     3421 cgaccgccaa agggaggagc agatggctac caaccggacg tatgtgaaga ccgaagtggt
     3481 cggcagctcc gacaaatcgg tctccgatgc catcgagtcg gcaatcgctg tggcatcgcg
     3541 ttcactgcgc aatctcgagt ggttcgaggt ggtcgacgtt cgaggcagca ttcgcgacaa
     3601 caaagttgcg aattatcagg tcacgctgaa actgggcttg aggtacgaag caaaggcgta
     3661 gcagaaacgt gtctgctggc gtttagcgga acgcaacgca gatcggtgct tcgtcggcgt
     3721 ggttggaacg acggcgggac ggtattgtcc gaggataccg ttcagccggg aggccgccat
     3781 gcccgatgca aaaccactgt ccttccaggt gccggcgccg gccgtgcggc cgggcggcac
     3841 gccggatttc agcgacgtgc ggatttcccg ggcaggcgag gtgcggcgcc cggacgtgga
     3901 tgctgcgccg gaggatatcc gcgacctcgc ctatgcgatc attcgcgtgc tcaatcgcga
     3961 gagcgaggcg gtgggtccgt gggccggcct gctgagcgat gcggagctgc tcgaggggct
     4021 gcgccacatg atgaccttgc gcatcttcga tgcgcgcatg cagatggccc agcgtcaggg
     4081 caagacgtcg ttctacatgc agcacatggg tgaggaggcg gtgagctgcg ccttccgcaa
     4141 ggcgctcgag cccggcgaca tgaacttccc gacctaccgc caggccgggc tgctgatcgc
     4201 cggcggctat ccgatgctcg acatgatgtg ccagatctat tccaacgagc tcgacccgat
     4261 gaagggtcgc cagttgccgg tgctctattc ggcgcgcgag cacggcttct tttcgatatc
     4321 gggcaacctt gccacccagt tcatccaggc ggtcggctgg gcgatggcgt cggccatgaa
     4381 gcgcgacacc cggatcgcgg tcggctggat cggcgacggc tcgaccgcag agtcggattt
     4441 ccacgccggc ctggtttttg cctcgaccta caaggcaccg gtcgtgctca acatcgtcaa
     4501 caatcaatgg gcgatctcga ccttccaggg catcgcccgc ggcggctcgg gcaccttcgc
     4561 cgcgcgcggc ctgggcttcg gcctgccggc gctgcgcgtc gacggcaacg actatctcgc
     4621 cgtccatgcc gtggcgaagt gggcgatcga gcgggcgcgg cgcaacctgg gcccgaccct
     4681 ggtcgagtac gtgacctatc gggtcggcgc gcattcgacc tcggacgatc cctcggccta
     4741 ccggcccaag acggaatccg acgcctggcc gctcggcgat cccgtgcttc gcctgaaggg
     4801 gcatctgatc cttcgcggca tctggtcgga ggaacggcac aagcaggccg aagcggagat
     4861 cctggcggaa gtcatcgcca tccagaagga ggccgagagc cacggcacgc tgcattccgg
     4921 ccctcacccc tcggcgcgcg acatgttcga gggcgtctac gagcagatgc cgccgcacct
     4981 gcgtcgccag cgccaacagg cgggagtcta gccgatgccg cgcaagacga tggtcgaggc
     5041 gatccgcgac gccatggacg tcgccatgca gcgcgacgac aacgtcgtcg tgttcggcga
     5101 ggatgtcggc tatttcggcg gcgtgttccg ttgcacccag ggcctgcaac agaagttcgg
     5161 cgccagccgc tgcttcgaca cgccgatcag cgagctcggc atcgtcggcg ccgcggtcgg
     5221 catggcggcc tacgggctgc ggccgtgcgt cgaaatccag ttcgccgact atatgtatcc
     5281 ggcctacgac cagatcgtgt cggaggcggc gcggctgcgc tatcgctcca acggccagtt
     5341 caccgcgccg atggtggtgc gcatgccgac cggcggcggc attttcggcg gccagacgca
     5401 cagccagagc cccgaggcgc tgttcaccca tgtcgccggc ctgaagaccg tcgtgccctc
     5461 caacccctac gacgccaagg ggctgctgat cgcctcgatc gaggacaacg atccggtgat
     5521 ctttctcgag cccaagcggc tctacaacgg cccgttcgac ggccaccatg agcggcccgt
     5581 cacgccgtgg gcgcgccatc ccctgggcga ggtcccggag ggtcactaca ccgttcccct
     5641 gggcaaggcc gcggttcgtc gcgagggtgc ggcggtgacg gtgctggcct acggcaccat
     5701 ggtcttcgtc gccgaggcgg ccgccgccga gaccggcatc gatgccgaga tcatcgacct
     5761 gcgcacgctc gttccctacg acctcgacac gatcgccgcc tcggtcgaga agaccggacg
     5821 gtgcgtcgtc gtccatgagg cgacgctgac ctcgggcttc ggcgccgagc tgagcgcgct
     5881 ggtgcaggag aattgcttct atcatctcga ggcgccggtg gtgcgcgtca ccggctggga
     5941 cacgccctat ccgcacgccc aggaatggga ctatttcccg gggccggcgc gagtcggccg
     6001 cgcgctcaag gccgtgatgg aggcttgaga tgggaatccg catcatcaag ctgcccgatg
     6061 tcggcgaggg cgtggccgag gccgagatgg tcgaatggca tgtcgaggtc ggccagtcgg
     6121 tactggagga tcagcttctc gccgccgtca tgaccgacaa ggcgaccgtc gagatcccat
     6181 cgcccgtcgc cggcaccgtc gtggcgctgg gcgccgaggt gggtggcgtc gtggccgtcg
     6241 gcgccgagct ggtccgcttg gaagtggcgg gtgagggcaa cgaagaagtg tcggccgcgc
     6301 cgcgggaagc ggcggcgacc gcgcccgccg aaaagccggc tgctcccgcg ccagcaccag
     6361 tgcct
//
LOCUS       DASWGA010001021         3561 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1259439, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001021 DASWGA010000000
VERSION     DASWGA010001021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3561
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1259439"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VF991_23350"
     CDS             complement(<1..597)
                     /locus_tag="VF991_23350"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF027439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX9559448.1"
                     /translation="MSEPEILFDVKDGLGLITLNRPKALNALTHGMILELEKVIPSWE
                     NDAAIKAVVVRGAGDRAFCAGGDVIGLYREMRDNPSGTLRRDFFRDEYIVNRRIYRYA
                     KPWISLIDGIDMGGGVGLSAHGSHSAASEKFLFAMPETTIGLFPDVGGGYFLTRLPGA
                     LGTFLALTSHRLKAADALWAGIVDAYVPSARIDDLQAAL"
     gene            complement(713..1852)
                     /locus_tag="VF991_23355"
     CDS             complement(713..1852)
                     /locus_tag="VF991_23355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009759742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9559449.1"
                     /translation="MNFELTEDQEAFRDTARQFATERMLPEAARWDAEKIFPVEALRE
                     AAALGFGGIYVQEDVGGSGLSRLDAALIMEELAAACPSTAAYISIHNMAAWMIDGFGD
                     DDQRRRFLPKLCSMAHFASYCLTEPGAGSDAAGLATRAELSGDHYVVNGTKAFISGGG
                     RSDIYVVMLRTGGKGAGGISTLVVEAGTPGLSFGKQEQKLGWNSQPTCAVMFENCKVP
                     VANRLGPEGHGFKIAMAGLDGGRINIGACSLGGARACLETASRYVVERKQFGKPLADF
                     QATQFKLADMATDLDAARLLIWRAAALLDVKSPEATQAAAMGKRFATDVGFRIVNDAL
                     QLHGGYGYLKDFPIERYLRDLRVHQILEGTNEIMRVIISRRLLMG"
     gene            1918..2349
                     /locus_tag="VF991_23360"
     CDS             1918..2349
                     /locus_tag="VF991_23360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559450.1"
                     /translation="MTWREMTDDELAGLPEARLGGALLWMVTAAAILCIGALIGSLVA
                     FQALREIGGRYTVAVGFIAVWSAVFVIMTLLRLRATPVVASLGFLAWIAYRFAAALLS
                     HAGWPLMVDLLGEALLAAGFCGYMAGGVRPNAYYRRRLPAP"
     gene            2368..3381
                     /gene="hemB"
                     /locus_tag="VF991_23365"
     CDS             2368..3381
                     /gene="hemB"
                     /locus_tag="VF991_23365"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEX9559451.1"
                     /translation="MANRFSILGRYPTTRLRRNRREEWSRRLVAETRLSVDDLIWPVF
                     VQEGHGERTPVESMPGVDRLTIDLFVEAAKEARDLGIPAIAIFPETDPKAKTPDAREA
                     YNPDNLVCRAIVAAKKHVLGIGIVCDVALDPFNSDGHDGIVRDGYVQNDESIEALVKQ
                     AIVQTEAGADVQAPSDMMDGRIGAIRQALDAKGHVHTQIMSYAAKYASGFYNPFRDAI
                     GSSGALKGDKKTYQMDPANSDEALREVGFDIEEGADMVMVKPGLPYLDIVRRVKDAFG
                     VPTYAYQVSGEYAMLRGAADRGWLDWNKVLLETLTGFKRAGCDGILTYGAVDAARLLN
                     AKK"
     gene            3378..>3561
                     /locus_tag="VF991_23370"
     CDS             3378..>3561
                     /locus_tag="VF991_23370"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX9559452.1"
                     /translation="MIERPSARLILLDPRDRLFLFNVHDPAVFDPAQPFHDPFWVMIG
                     GLVDPGEDFARAAVREA"
BASE COUNT          585 a         1201 c         1168 g          607 t
ORIGIN      
        1 aagggctgcc tgcaggtcgt cgatgcgtgc gctcggcaca taggcgtcga cgatgccggc
       61 ccacagcgcg tctgccgctt tcagccgatg gctggtgagc gccaggaagg ttcccaaggc
      121 gcccggcagc cgggtcagga aatagccgcc gccaacgtcg gggaagaggc cgatggtcgt
      181 ttccggcatg gcgaacagga acttctcgct ggccgcggag tgcgacccgt gcgcggagag
      241 gccgacgccg ccacccatgt cgatgccgtc gatcagcgag atccacggct tggcatagcg
      301 gtagatgcgg cggttgacga tatattcgtc gcggaagaag tcgcggcgca aggtgcccga
      361 cgggttgtcg cgcatctcgc gatagaggcc gatgacgtcg ccgccggcac agaaagcgcg
      421 atcgcccgcc ccgcgcacca ccaccgcctt gatcgcagca tcgttctccc agctcgggat
      481 gaccttttcc aactcgagga tcatgccatg cgtcaacgcg ttcagcgcct tgggccggtt
      541 gagcgtgatg aggccgaggc cgtctttgac gtcgaacagg atttcaggct cggacattcg
      601 tactccatcc cccgccgccc ttcgggcacc tcccccatat gatgggggag gaaaagaaag
      661 catcatgcct cccccattat atgggggagg tggcgcgaag cgcccgaggg ggtcatccca
      721 tcaaaagcct gcgcgaaatg atcacgcgca tgatctcgtt ggtgccttcg aggatctgat
      781 gcaccctgag gtcgcgcaaa taacgctcga tgggaaagtc cttcaagtag ccgtagccgc
      841 catgcagttg cagcgcatcg ttgacgatcc ggaagccgac gtcggtggcg aagcgcttgc
      901 ccatggcggc ggcctgcgtc gcctcgggcg acttgacgtc gagcagcgcg gcggcgcgcc
      961 agatcagcag ccgcgcggcg tcgaggtcgg tcgccatgtc ggccagcttg aactgcgtcg
     1021 cctggaagtc ggccagcggc ttgccgaact gcttgcgctc gaccacgtag cgcgacgccg
     1081 tctccaggca ggcgcgcgcg ccgcccagcg agcaggcgcc gatgttgatg cgcccgccgt
     1141 cgagaccggc catggcgatc ttgaagccgt ggccctccgg ccccaagcgg ttggcgaccg
     1201 gcaccttgca gttctcgaac atcaccgcgc aagtcggctg gctgttccag ccgagcttct
     1261 gttcctgctt gccgaacgac agaccaggcg ttcccgcctc gacaacaagt gtggagatgc
     1321 cgcccgcccc cttcccgccg gtgcgcagca tgacgacata gatgtcgctg cgcccgccgc
     1381 cggagatgaa cgccttggtg ccgttcacga cataatgatc gcctgaaagc tcggcgcgcg
     1441 tggcgagccc ggcggcgtcg gagccggcgc ccggctcggt gaggcagtag ctggcgaaat
     1501 gcgccatcga gcagagcttg ggcaggaagc gccgccgttg atcgtcgtcg ccgaagccgt
     1561 cgatcatcca cgcggccatg ttgtggatcg agatgtaggc cgccgtgctg ggacaggcgg
     1621 cggccagctc ctccatgatc agcgcggcat cgagtcgcga cagtccgctg ccgccgacat
     1681 cttcctgcac gtagatgccg ccgaagccaa gggctgccgc ctcacgtagc gcctcgaccg
     1741 ggaagatctt ctcggcgtcc cagcgcgccg cctcgggcag catgcgttcg gtcgcgaatt
     1801 gccgcgccgt atcgcggaac gcctcctggt cttcggtaag ctcaaagttc atgcgcgcgg
     1861 gatcatatcg gggggacccc ccctgtcaac gaagcggcgc cgctcctatg ctcgggcatg
     1921 acctggcgcg aaatgaccga cgacgagctc gccggtttgc ccgaagcgcg gctgggcggt
     1981 gcgctgctct ggatggtcac cgcagccgct attctttgca tcggcgcact catcggcagc
     2041 ctggtcgcgt tccaggcgct gcgcgagatc ggcggccgct acactgtcgc cgtgggcttc
     2101 atcgccgtct ggtcagcggt cttcgtcata atgaccctac tgcgcctgcg tgcgacgcct
     2161 gtcgtggcga gcctgggatt cctggcgtgg atcgcctatc gcttcgccgc cgccctgctg
     2221 agccatgccg gctggccgct gatggtcgat cttttgggcg aagcccttct ggccgccggt
     2281 ttctgcggct atatggccgg cggggtgcga cccaacgcct attatcgccg tcgccttccg
     2341 gcgccttgag cggctataaa ccggtccatg gcgaaccgct tttccatcct gggccgctat
     2401 ccgacgacgc ggctgcgccg caaccgccgc gaggagtggt cgcgccgcct ggtggccgag
     2461 accaggcttt cggtcgacga cctgatctgg ccggtgttcg tccaggaagg ccacggcgag
     2521 cgcacgcccg tcgagtccat gccgggcgtc gatcggctca ccatcgatct tttcgtcgag
     2581 gcggccaagg aggcgcgcga tctcggcatc ccggcgatcg cgatctttcc cgagaccgat
     2641 cccaaggcca agacgcccga cgcgcgcgag gcctacaatc ccgacaacct cgtctgccgc
     2701 gccatcgtcg cggccaagaa gcatgtttta ggcatcggca tcgtctgcga cgtggcgctc
     2761 gatcccttca acagcgacgg ccacgacggc atcgtgcgcg acggctacgt gcagaacgac
     2821 gaatcgatcg aggccctggt caagcaggcg atcgtgcaga ccgaggccgg cgccgacgtg
     2881 caggcgccgt ccgacatgat ggacggccgc atcggcgcca tccgccaggc gctcgacgcc
     2941 aagggccatg tccataccca gatcatgtcc tatgccgcca agtacgcctc gggcttctac
     3001 aatcccttcc gcgacgccat cggcagctcg ggtgcgctga agggcgacaa gaagacctac
     3061 cagatggatc ccgccaactc cgacgaggcg ctgcgcgagg tcggcttcga catcgaggaa
     3121 ggcgccgaca tggtgatggt gaagcccggc ctgccctatc tcgacatcgt gcgccgcgtg
     3181 aaggacgcct tcggcgtgcc gacctacgcc taccaggtga gcggcgagta cgccatgttg
     3241 aggggcgccg ccgaccgcgg ctggctcgac tggaacaagg tgctgctcga gacgctgacc
     3301 ggcttcaagc gcgccggctg cgatggaatc ttgacttacg gcgcggtgga cgcggccagg
     3361 ctgctgaacg ccaagaaatg atcgaacgtc cgtcggcgcg gctgatcctg ctcgacccgc
     3421 gggatcgcct cttcctgttc aacgtccacg acccggcggt gttcgatccc gcccagccct
     3481 tccacgatcc gttctgggtg atgatcggcg gcctggtcga tcccggcgag gatttcgccc
     3541 gggccgcggt gcgcgaggcc t
//
LOCUS       DASWGA010001022         2440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_241781, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001022 DASWGA010000000
VERSION     DASWGA010001022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241781"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VF991_23375"
     CDS             complement(<1..262)
                     /locus_tag="VF991_23375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004434693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9559453.1"
                     /translation="MAERILMIDDDNRLAGMVSDYLGGAGFRVTIAATAREGEALLKR
                     EAFDAVILDLMLPDADGLDFCRRLRGTTDVPILMLTARGEPMD"
     gene            complement(301..774)
                     /locus_tag="VF991_23380"
     CDS             complement(301..774)
                     /locus_tag="VF991_23380"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic heavy metal sensor"
                     /protein_id="HEX9559454.1"
                     /translation="MATLSIKTMMAALLAGSIAATAGGFAYAKTDGQAFDPAKFQQRI
                     EKRVDKALTGTDATADQKKKVTEILQTAFKDMKPLHDKRVENRKAMEAAMQAPTIDPA
                     RIEQIRAEQMKVADESSKRFTKALTDAGNVLSASQRQAFFKSWSARGEHHGNRRG"
     gene            879..1388
                     /locus_tag="VF991_23385"
     CDS             879..1388
                     /locus_tag="VF991_23385"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9559455.1"
                     /translation="MTILRTERLTLRPLAPEDAEAYAAMRYHPAVAEWLLPAAGDPVD
                     AALASIERFAQSWQQRRYAPWGLFLEGRLIGHGGLNFVPEFGETEVLWALHPDVWGKG
                     YATETARAALAYGFDTLALKLIFAMTRPDNLTSQAVMRRLGLLYRKNVVYKGMNAVWL
                     DIDRARWTG"
     gene            complement(1385..2164)
                     /gene="hisN"
                     /locus_tag="VF991_23390"
     CDS             complement(1385..2164)
                     /gene="hisN"
                     /locus_tag="VF991_23390"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019996190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HEX9559456.1"
                     /translation="MAGSVPAELVTLAHRLADVARPIAARYFRTAVTVDDKTDLSPVT
                     VADREAETAMRTVLAAQVPEHGVFGEEHGAVRTDADYVWVLDPIDGTKAFITGLPIFG
                     TLIALLHRGKPVLGVIDQPILDERWFGVEGERSTFNGKPIGVRACPALDHAYMYSTAP
                     IMFSGAFEKRHEALTRQVKLFRWGGDCYAYGLLASGHVDLVVENSLKLYDFAALVPVI
                     KGAGGLITDWRGNELDIESDGSVLAAGDAAIHRSALAVLAG"
     gene            complement(2177..>2440)
                     /locus_tag="VF991_23395"
     CDS             complement(2177..>2440)
                     /locus_tag="VF991_23395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEX9559457.1"
                     /translation="GGPNKVGPNQWDIVGRKKASHEGFSYSSALQAKGGEWTYEDIDH
                     MIYKPQAFVRGTKMAFAGLPKEQDRADVIAYLRTMADTPQPLP"
BASE COUNT          373 a          802 c          815 g          450 t
ORIGIN      
        1 ggtccatcgg ctcgccgcgc gcggtcagca tcaggatcgg cacgtcggtg gtgccgcgca
       61 ggcggcggca gaaatcgagg ccgtctgcgt cgggcagcat gaggtcgagg atcaccgcgt
      121 cgaaggcctc gcgcttcaag agcgcctcgc cctcgcgcgc cgtcgccgcg atggtcacac
      181 gaaagcccgc cccgccgaga tagtccgaga ccatcccggc gaggcggttg tcgtcgtcga
      241 tcatcaggat acgctcggcc atggcgtcag tatcaggccg gcgcggcccc gatgtcacgg
      301 tcagccgcgg cggttgccgt ggtgctcgcc gcgcgcgctc cagctcttga agaaggcctg
      361 gcgctgcgag gcgctcagca cattgccggc atctgtcagc gccttggtga agcgcttaga
      421 gctctcgtcg gccaccttca tctgctcggc acggatctgc tcgatcctcg ccgggtcgat
      481 ggtcggggcc tgcatcgcgg cctccatcgc cttgcgattc tcgacccgct tgtcgtgcag
      541 cggcttcatg tccttgaagg cggtctggag gatctccgtc accttcttct tctggtcagc
      601 cgtcgcgtcg gtgccggtca gcgccttgtc cacacgcttt tcgatgcgct gttggaactt
      661 ggccggatcg aacgcctggc cgtcggtctt ggcgtaggcg aagccgccgg cggtcgcggc
      721 gatgctgccc gcgagcagcg ccgccatcat cgtcttgata ctgagggttg ccatgtctgt
      781 ctccgttgat tcgggtggga tgtccccgtg acggtgatat ggacccaggc ggtttcgctg
      841 ccgtctcggc tgggtaaagt tgtgtaaaga tcgccgccat gacgatcctc aggaccgaac
      901 ggctgacgct tagacccctg gcgccggagg atgccgaggc ctacgccgcc atgcgttatc
      961 atccggccgt ggcggagtgg ctgttgccgg ccgccggtga tccggtcgat gcggcgctcg
     1021 cctcgatcga gcgtttcgcg caatcgtggc agcagcgccg ctatgcgccc tggggccttt
     1081 tcttggaggg ccgcttgatc ggccatggcg ggctgaactt cgtgcccgaa ttcggcgaga
     1141 ccgaagtgct gtgggcgctg caccccgacg tttggggcaa aggctacgcg accgagaccg
     1201 cccgcgccgc tcttgcctat ggcttcgata ccctggcgct aaagctgatc tttgccatga
     1261 ccaggcccga caacctcacc tcgcaggcgg tgatgcgccg gctcggcctg ctctatcgca
     1321 agaacgtcgt ctacaagggc atgaatgcgg tctggctcga catcgaccgc gcgcgctgga
     1381 cgggctagcc ggccaacaca gccaatgccg aacgatggat cgcggcatcg ccggccgcca
     1441 gcaccgagcc gtcggactcg atgtcgagtt cgttgccccg ccaatcggtg atcaggccgc
     1501 ccgcgccctt gatcaccggc acgagggctg cgaagtcgta gagcttgagc gaattctcga
     1561 ccaccaggtc gacatggccc gaggccagca gcccgtaggc atagcagtcg ccgccccatc
     1621 ggaagagctt gacctgccgc gtcaacgcct cgtggcgctt ctcgaaggcg ccggaaaaca
     1681 tgatcggcgc ggtcgagtac atataggcgt ggtcgagcgc gggacaggcg cgcacgccga
     1741 tcggcttgcc gttgaaggtc gagcgctcac cttcaacccc gaaccagcgc tcgtccagga
     1801 tcggctgatc gatcacgccc aacaccggtt tgccgcgatg aagcaaggcg atcagcgtgc
     1861 cgaagatcgg caggcccgtg atgaaagctt tggtgccgtc gatcggatcg agcacccaga
     1921 catagtcggc gtcggtgcgg accgcaccgt gctcctcgcc gaacacgcca tgttcgggca
     1981 cctgcgcggc cagcacggtg cgcatggcgg tttcggcttc gcgatcggcg acggtgaccg
     2041 ggctcaaatc ggtcttgtcg tcgaccgtca cggcggttcg gaagtagcgc gccgcgatcg
     2101 gccgcgcgac atcggcgagg cgatgagcga gtgtgaccag ttcggcggga accgacccgg
     2161 ccatgtcggc ctgatcctac ggcaggggct gcggcgtgtc ggccatggtg cgcaggtagg
     2221 cgatcacgtc ggcgcgatcc tgctccttgg gaaggccggc gaacgccatc ttggtgccgc
     2281 gcacgaaggc ctgcggcttg tagatcatgt ggtcgatgtc ttcgtaggtc cactcgccgc
     2341 ccttggcctg caaggccgac gaatagctga agccttcgtg gctcgccttc ttgcggccga
     2401 cgatgtccca ctggttcggg ccgaccttgt tcggcccgcc
//
LOCUS       DASWGA010001023         2330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1136629, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001023 DASWGA010000000
VERSION     DASWGA010001023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1136629"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..1238)
                     /locus_tag="VF991_23400"
     CDS             complement(3..1238)
                     /locus_tag="VF991_23400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HEX9559458.1"
                     /translation="MASSHGTPPVFNNKVISWIDHRLPIFSYMEKEYHHFPTPRNFNY
                     FWNFGAIATVMLVLMIVTGIVLATNYTPHTTMAFDSVERIMRDVPSGWLIRYLHMTGA
                     SFFFIAVYVHIFRGMYYGSYKSPRELLWILGVVILLLMMATAFMGYVLPWGQMSFWGA
                     TVITSLFSAIPVVGDSITTWLWGGFAIDNPTLNRFYALHYLLPFVIVGVVALHVVALH
                     VHGSNNPLGIDPKGPQDTVPFHPYYTMKDGFGLMVFLIVYAGFAFFAPNYLGDAANYI
                     PANPLVTPTHIVPEWYFLPFYAILRAIPDKLGGVLAMFGSIAVLFVLPWLDTSRVRSC
                     TFRPIYKWFMFVLVADVIVLGVCGANPPEGWYVPIAQVGTLYYFFHFLILLPVLGKIE
                     RPLPLPPSIADAVLKKKAG"
     gene            complement(1281..1847)
                     /gene="petA"
                     /locus_tag="VF991_23405"
     CDS             complement(1281..1847)
                     /gene="petA"
                     /locus_tag="VF991_23405"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEX9559459.1"
                     /translation="MASSSIPAGGHVDPTRRDFLMVATGAMGAIGTIAVAWPFINNLN
                     PAADTLALSTVEVNVAPVQVGQAITVKWRGKPLFIRHRTPEEIKAAEAVPMSELRDPQ
                     TDNSRVTDTAKKVRPEWLIMIGVCTHLGCVPLGNNPGDPKGEFGGWFCPCHGSMYDTS
                     GRIRKGPAPLNLAIPGYLFTSDTLVRVG"
     gene            2009..>2330
                     /locus_tag="VF991_23410"
     CDS             2009..>2330
                     /locus_tag="VF991_23410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HEX9559460.1"
                     /translation="MRLALFEPDIPQNLGAFIRLAACLGAPLDIIEPCGFPLDDKRIR
                     RAAMDYVDLAKIVRHASWQAFRRDRPPGRLVLLTTSGNQRFPDVAFRTDDTLLLGRES
                     AGVPA"
BASE COUNT          442 a          712 c          785 g          391 t
ORIGIN      
        1 ccttaacccg ccttcttctt gagcaccgcg tcggcgatgc tggggggcaa tggcaacggc
       61 cgttcgatct tgcccaggac cggcagcagg atgaggaagt ggaagaagta gtagagcgtg
      121 ccgacctggg cgatcggcac ataccagcct tccggcgggt tggcgccgca gacgcccagc
      181 acgatgacgt cggccaccag cacgaacatg aaccacttgt agatcggccg gaacgtgcac
      241 gaccgcacgc gcgaggtgtc gagccacggc aggacgaaca gcacggcgat cgagccgaac
      301 atggccaaaa cgccgcccag cttgtcgggg atggcgcgca ggatggcgta gaacggcagg
      361 aagtaccatt cgggcacgat gtgcgtgggc gtcaccagcg ggttggccgg gatgtagttg
      421 gcggcgtcgc ccaagtagtt gggtgcgaag aaggcgaagc ccgcatagac gatcaggaag
      481 accatcaggc cgaagccgtc cttcatcgtg tagtagggat ggaacggcac ggtgtcctgc
      541 gggcccttgg ggtcgatgcc cagcgggttg ttcgagccat ggacgtgcag cgccacgaca
      601 tgcagcgcca ccacgccgac gatgacgaac ggcagcaggt agtgcagggc gtagaagcgg
      661 ttgagcgtcg ggttgtcgat ggcgaagccg ccccacagcc aggtggtgat cgaatcgccg
      721 accaccggga tggccgagaa caggctggtg atgacggtgg cgccccagaa gctcatctgg
      781 ccccacggca gcacgtagcc catgaacgcc gtcgccatca tcagcagcag gatgacaacg
      841 cccaggatcc agagaagctc gcgcggcgac ttgtaagagc cgtagtacat gccgcggaag
      901 atgtggacgt agacggcaat gaagaagaac gacgcgccgg tcatgtgcag gtagcggatc
      961 agccagcccg acggcacgtc gcgcatgatg cgctcgaccg agtcgaaggc catcgtggtg
     1021 tgcggcgtgt agttggtcgc cagcacgatg ccggtcacga tcatgagcac cagcatcacc
     1081 gtggcgatcg cgccgaaatt ccagaagtag ttgaaattcc tgggcgtcgg gaagtggtga
     1141 tactccttct ccatatacga gaagatcggc aggcggtgat cgatccagga gatcaccttg
     1201 ttgttgaaga ccggcggcgt gccgtgagac gaggccatta tgcgaactcc tggagcgatc
     1261 cttgagggtc ggtcgggcga tcagccgacg cggacgagag tgtctgacgt gaacaggtag
     1321 cccgggatcg cgaggttgag cggcgccggc cctttgcgga tgcgtcccga cgtgtcgtac
     1381 atcgagccgt ggcacgggca gaaccagccg ccgaactcgc ccttggggtc gcccggattg
     1441 ttgccgagcg gcacgcagcc cagatgggtg cagacgccga tcatgatcag ccactccggc
     1501 cgcaccttct tggcggtgtc ggtgacgcgc gaattgtcgg tctgcggatc gcgcagctcc
     1561 gacatcggta ccgcctcggc cgccttgatc tcctccggcg tgcgatggcg gatgaacaag
     1621 ggcttgccgc gccacttcac ggtgatcgcc tggccgacct ggaccggtgc cacgttcacc
     1681 tcgacggtcg agagcgccag cgtatcggcg gcgggattga gattgttgat gaagggccag
     1741 gcgacggcga tcgtgccgat ggcgcccatg gcgccggttg cgaccatgag aaagtcgcgc
     1801 cgggtcggat cgacatgacc gccggccggg atgcttgatg acgccattgt ttctctcttc
     1861 cgtccccccg aggagatggg tctttagacc gcaaaacccc cttatgtttc aaggctctgt
     1921 tggtcgcagg ctgggcgcac accgttatgt gacagcgtgc cgcacgaacg cgcgctttcg
     1981 cgacgcggac gagagtagaa cagggtccat gcgccttgcc ctgttcgagc ccgatattcc
     2041 tcagaatctc ggggccttca tccgtttggc cgcctgcctg ggcgcgccgc tcgacatcat
     2101 cgagccctgc ggctttccgc tcgacgacaa gcgaatccgc cgcgccgcca tggactacgt
     2161 cgacttggcc aaaatcgtcc ggcacgcctc gtggcaggct tttcgccgcg atcgcccgcc
     2221 gggtcgcctc gttctgctga ccacgtcggg caaccaacgc tttcccgatg tcgccttccg
     2281 gacagacgac acgctgctgc tcggccgcga aagcgccggc gtgccggccg
//
LOCUS       DASWGA010001024         3263 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2265911, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001024 DASWGA010000000
VERSION     DASWGA010001024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3263
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2265911"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..527
                     /locus_tag="VF991_23415"
     CDS             <1..527
                     /locus_tag="VF991_23415"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9559461.1"
                     /translation="MLAGMKQDLAGYLRTSGSSLSAAEVLAGIQAPAIAALFKSVDAL
                     PMTAEQVQQLTDVQAPALRRRFEGVLQDKGLAAIVFPGEAISAQTIKLPSDPSPWIVN
                     GKAVGQQMLSRNTRMAAALGLPALTLPSGLTADGLPVSLEFNAAGGQDAKLLGLAQTV
                     ESVLGRLPPPRLSL"
     gene            complement(528..1655)
                     /locus_tag="VF991_23420"
     CDS             complement(528..1655)
                     /locus_tag="VF991_23420"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase"
                     /protein_id="HEX9559462.1"
                     /translation="MDGGSSIDQLFCPVSLGGLALRNRFVMAPMTRCCSPNGVPGPEV
                     AHYYARRAQGGVGLIISEGTSVCHPAASNDSNIPRFHGDDALAGWRRVASQVRAAGGR
                     IMPQLWHVGLVRKRAVETLSQGARSSAEVSPSGLLNADTKLGEPMSAAEIEDVVQSFA
                     SCAESAMRLGFDGIELQGAHGYLIDQFLWETTNRRTDAYGGSPRKRSRFAAEIVAECR
                     RRTRPDFPIVFRFSQWKQQDYTARLATSPAELEQVLEPLVEAGVDIFHCSQRRYWQPE
                     FPDSPFTLAGWTKAVTGKPAIIVGSVGLDRDLTSAGFAVGASALVADLGKLPGMLCQE
                     QFDLVAVGRAMIANADWCHLVQGGKWRHATPYSSDLLQRLY"
     gene            1792..>3263
                     /locus_tag="VF991_23425"
     CDS             1792..>3263
                     /locus_tag="VF991_23425"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9559463.1"
                     /translation="MDGNANLPGDHERSMLREAIRTLLNQHWPADKAKALAAEPAAVA
                     RLWRVLAEQGCTVLGTDPASGGLREILAVMAELGRAACPAPMLDTAIVNTLLAQAAAG
                     DPGLSSFLDELHAGQAYACVSFGALDPDRGTGGITLSDGHVSGTVAFVDAAASATHFI
                     VFDAGGPSVAIVERTAEKVGVTPTRAMGMDGLCKVTFTDAPAVAVPVAVDRVGDLLSL
                     SRLCYAARAWGAADRAFELVVQYVKIRQQFGQPVGRFQAIQHKLANNLIALMGVQACL
                     DNAASHYDRGIAEWRTFAATAFAYAHVTLRQVALETHHTFGAIGYAEDHEAPRHFKRI
                     HLDIARHGGGRRAREELADRYLGETKQDLPEFDLGAEGNAFRREVRAWLAEHWSPPRR
                     AAYEADPKTHREHDPQFALDIGKTGWLGLTWPRKFGGLERSPYELLALLEELNRADAP
                     RAGAPIQAASWMIYGTPEQQVRYLPEILRGEVVYGMWYSEP"
BASE COUNT          528 a         1078 c         1137 g          520 t
ORIGIN      
        1 tgatgctggc cgggatgaag caggatctcg cgggctatct caggacgtcg gggtcgtcgc
       61 tgtcggctgc ggaggtgctg gccggcatcc aggcgccggc gatagcggcg ctcttcaaga
      121 gcgtcgacgc cctgccgatg acggctgaac aggtccagca gctcaccgac gttcaagcgc
      181 cggcgctgcg ccggcgattc gagggcgtgc tgcaggacaa agggttggcg gcgatcgtct
      241 ttcccggcga ggccatatcc gcccagacga tcaagctgcc cagcgacccc tcgccgtgga
      301 tcgtcaacgg caaggcggtc ggtcagcaga tgttgtcgcg caatacgcgg atggcggcgg
      361 ccctcggcct gccggcgctg acgctgccat ccggcctcac ggccgatggc ttgccggtca
      421 gcctggaatt caatgccgcg ggaggccagg atgcgaagct cctggggctc gctcagaccg
      481 tggagtccgt gctgggccgc ctgccgccgc cgcgactgtc gctgtagtca gtagagccgc
      541 tgcaagagat cggacgaata aggggtcgcg tgacgccact tgccgccttg gacgagatgg
      601 caccagtctg cgttggcgat catggctctg ccgaccgcga ccagatcgaa ctgctcctgg
      661 cacagcatgc ccggcagctt gccgaggtcg gcgaccaatg ccgaagcacc gacggcgaag
      721 cccgcgctgg tgagatcgcg atcgaggccg accgaaccga cgatgatggc gggcttgcca
      781 gtcaccgcct tggtccagcc ggccagggtg aacgggctgt cgggaaattc gggttgccaa
      841 tagcgccgct gcgagcaatg gaaaatgtcg acgccggcct cgacgagcgg ttcgagaacc
      901 tgctcgagct cggccgggct cgtagccaaa cgcgccgtgt agtcctgttg cttccactgc
      961 gagaagcgga agacgatcgg aaagtcgggc cgcgttcgac gccggcactc ggcgacgatc
     1021 tcggcggcaa atcgcgagcg cttgcgcgga cttccgccat acgcgtcggt ccgccggttg
     1081 gtcgtttccc acaggaactg gtcgatgaga tagccgtgcg ccccctgaag ctcgatgccg
     1141 tcgaagccaa gacgcatggc gctttcggcg caactggcga aggactgcac gacgtcttcg
     1201 atctcggccg cgctcatcgg ctcgccgagc ttggtgtcgg cgttcagcag gccggacggg
     1261 ctgacctcgg cgctcgatcg cgcgccctgg ctcaaggttt cgacggcgcg cttgcggacc
     1321 aggccgacat gccacagctg cggcatgatc cggccgccgg ccgcgcggac ctgggaggca
     1381 acccgccgcc agcccgccag ggcatcgtcg ccgtgaaatc tcgggatgtt cgaatcgttg
     1441 gaggcggcgg ggtggcagac cgacgtgcct tcgctgatga tcaggccgac gccgccctgg
     1501 gcgcgtcttg cgtagtagtg ggcgacctcg gggcccggca cgccgttcgg cgagcagcag
     1561 cgcgtcatcg gcgccatgac gaagcgattc cgcaacgcca gcccgcccag cgatacgggg
     1621 caaaacagtt ggtcgatcga agagccgcca tccatgatgt cgatcattat aagggtagga
     1681 ccaattaact caattcggtt tttctgccgg catgagcggt ggtctagggc ctctattggt
     1741 cttgaccaca atggtcggac caaatagggt cattggccaa agaggatgac catggacgga
     1801 aacgccaatc tgccgggcga ccacgagcgc agcatgctgc gcgaggccat ccgtacgctg
     1861 ctcaaccagc actggccggc cgacaaggcc aaggcgctcg ctgccgagcc ggcggcggtc
     1921 gcccgcctgt ggcgcgtcct ggccgagcag ggctgcacgg tgctgggcac cgatcctgcc
     1981 agcggcggcc tgcgcgagat tctcgcggtg atggcggaac tgggccgcgc ggcctgtccg
     2041 gcgcccatgc tcgatacggc gatcgtcaac acgctgctgg cgcaggcggc cgctggcgac
     2101 cccggcctgt cgagcttcct cgatgagttg catgccggcc aggcctacgc ctgcgtgtcg
     2161 ttcggcgcgc tcgaccccga ccgaggcacg ggtggcatca cgctgtccga cggccatgtg
     2221 tcgggcacgg tggcgttcgt cgatgcggcg gcgtcggcga cgcacttcat cgttttcgac
     2281 gcgggcgggc cctcggtggc gatcgtcgag cggaccgcgg aaaaggtcgg cgttacgccg
     2341 acgcgggcga tgggcatgga cggcctgtgc aaggtgacgt tcaccgatgc gccggccgtc
     2401 gccgtgccgg tggcggtcga ccgcgttggc gacctgctgt cgctgtcgcg cctgtgttac
     2461 gcggcgcgcg cctggggcgc ggctgaccgg gcgttcgagt tggtcgtgca gtacgtaaaa
     2521 atccgccagc agttcggcca gccggtcggc aggttccagg cgatccagca caagctggcc
     2581 aacaacctca ttgccctgat gggcgtgcag gcctgtctcg acaatgcggc atcgcactac
     2641 gatcgcggca tcgccgaatg gcgaaccttc gccgccaccg cgttcgccta cgctcatgtg
     2701 acgctgcgcc aggtcgcgct ggaaacccac cataccttcg gcgccatcgg ctacgccgag
     2761 gaccacgagg cgccgcggca tttcaagcgc atccatctcg acatcgcccg gcacggcggc
     2821 ggacggcggg cgcgcgagga gctggccgac cgctacctgg gagagaccaa gcaggacctg
     2881 ccggagttcg atctcggcgc cgagggcaac gccttccgcc gcgaggtgcg ggcctggctt
     2941 gccgagcact ggtcgccgcc gcgccgtgcc gcctacgagg cggatccaaa gacgcatcgc
     3001 gagcacgacc cgcaattcgc gctcgacatc ggcaagaccg gctggctcgg gctgacctgg
     3061 ccccggaaat tcggcgggct cgagcgctcg ccctatgaat tgctggcgct gctcgaggag
     3121 ctcaatcgcg ccgatgcgcc acgcgccggc gcgcccatcc aggcggcgtc gtggatgatc
     3181 tacggcactc ccgagcagca ggtgcgctac ctgccggaga tcctgcgcgg tgaggtcgtc
     3241 tacggcatgt ggtacagcga gcc
//
LOCUS       DASWGA010001025         2005 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1892833, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001025 DASWGA010000000
VERSION     DASWGA010001025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1892833"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1059
                     /locus_tag="VF991_23430"
     CDS             <1..1059
                     /locus_tag="VF991_23430"
                     /EC_number="1.14.13.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybenzoate 6-monooxygenase"
                     /protein_id="HEX9559464.1"
                     /translation="IGAGIQLGPNAFHCFDRLGVGEAARAMAVYIDTLRLMDAMADGE
                     ITHIDLGEKFRARFGNPYAVVHRGDLHGVLLKGCRDHGLIELRTRADVASYDQDGRTV
                     TARLANGETVRGAALIGADGLWSSVRRQVTGDGAPRVSGHTTYRSVIPTEQMPEDLRW
                     NAATLWAGPKCHIVHYPLSGWKVFNLVVTYHSEAPEPVAGQPVPVEEVRKGFAHVCER
                     AQSIIRHGKDWRMWVLCDREPTDRWVDGRVALLGDAAHPMLQYMAQGACMAMEDAVCL
                     ADSLAGTNALEAGLARYRDRRVLRTTRLQLMSRAMGDHVYHPAGPHAALRNAIMTAKS
                     QDQWLDALEWLYGGNGLD"
     gene            1127..1369
                     /locus_tag="VF991_23435"
     CDS             1127..1369
                     /locus_tag="VF991_23435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003603045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HEX9559465.1"
                     /translation="MDTVGSFDAKTNFSALLERVERGEQIVITRRGKPVARLMPIAKS
                     PEGKVSDAMAKLRELRKGTTLGKLSWKELRDAGRKY"
     gene            1372..1782
                     /locus_tag="VF991_23440"
     CDS             1372..1782
                     /locus_tag="VF991_23440"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX9559466.1"
                     /translation="MLVVDASIALTWCFEDEVTAATEAIGAQVDADGAVVPTLWRLEV
                     ANALLLAERRGRLDRLGVEQRLRLLAALPISIDAETEARAWNDTMLLARAGRLTLYDA
                     AYLELAIRINGTLATLDRALARAARHLGVAVVAS"
     gene            1796..>2005
                     /locus_tag="VF991_23445"
     CDS             1796..>2005
                     /locus_tag="VF991_23445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559467.1"
                     /translation="MNRTRPNEVAIELNAVLVALIDDAPQVLTLQDGALLPSGPFESR
                     HPTLQTGLRAWVERQTHHPLGYVEQL"
BASE COUNT          331 a          648 c          672 g          354 t
ORIGIN      
        1 atcggcgccg gcatccagct cgggcccaat gcttttcact gtttcgaccg gctgggcgtc
       61 ggcgaggccg cgcgcgccat ggcggtctat atcgatacgc tgcggctgat ggacgccatg
      121 gccgatggcg agatcactca catcgatctc ggcgagaaat tccgcgcccg tttcggcaac
      181 ccctacgccg tggtccatcg cggcgatctg cacggcgtgc tgttgaaggg ctgccgcgac
      241 cacggcctga tcgagcttcg caccagggcc gacgtcgcga gctacgacca ggatggccgc
      301 accgtcacgg ccaggctcgc caatggcgag accgtgcgcg gcgcggccct gatcggcgcc
      361 gacggcctgt ggtcgagcgt gcgccgccag gtcaccggcg acggcgcgcc gcgggtgtcg
      421 ggccacacga cttatcgttc ggtgattccg accgagcaga tgccggaaga cctgcgctgg
      481 aacgccgcca cgctgtgggc cggcccgaag tgccacatcg tccactaccc gctgtcgggc
      541 tggaaggtgt tcaacctggt ggtcacctat cacagcgagg cgcccgagcc ggtcgccggc
      601 cagccggtgc cggtcgagga ggtgcgcaag ggctttgccc atgtctgcga gcgcgcgcaa
      661 agcatcatcc gccacggcaa ggactggcgc atgtgggtgc tgtgcgatcg cgagccgacg
      721 gaccgctggg tcgacggccg ggtggcgctg ctgggcgatg ccgcccatcc catgctgcaa
      781 tacatggcgc agggcgcctg catggcgatg gaggatgcgg tgtgcctggc cgattcgctg
      841 gcagggacga acgccctcga ggccggcctc gcgcgctatc gtgaccgccg cgtgctgcgc
      901 accacgcgcc tgcagctcat gtcgcgcgcc atgggcgatc acgtctatca tcccgcgggc
      961 ccgcacgccg ccctgcgcaa cgcgatcatg accgccaaaa gtcaggacca atggctcgac
     1021 gcgctggaat ggctctacgg cggcaacggg ctcgattgag agctgatctc acatcggtct
     1081 tgaacagact agtttaatag actagtttat ccagaaagga gatttcatgg ataccgttgg
     1141 ctccttcgat gccaagacca atttctctgc gcttctggag cgtgtcgagc gtggcgagca
     1201 gatcgtcatt accaggcggg gcaagcccgt tgcccggctg atgccgatcg cgaaatcgcc
     1261 ggagggcaaa gtgtcggatg ccatggcgaa gctgcgcgag ctgcgtaagg gaaccacgct
     1321 tggtaagctg tcatggaagg aattgcgcga cgcgggccgc aagtactgat catgctggtc
     1381 gtcgatgcct cgatcgccct tacctggtgc ttcgaggacg aagtgacggc agcgaccgaa
     1441 gccatcggtg cccaagtcga cgccgacggt gccgttgttc ccactctgtg gcggcttgaa
     1501 gttgccaatg cgttgctgct tgccgaacgg cgcggccgtc tcgacaggct tggcgtggag
     1561 cagcgccttc ggttgctggc cgcccttccg atctcgattg atgccgaaac cgaggcgcga
     1621 gcttggaacg acacgatgct gctggcgcgc gccgggcggt tgacacttta cgatgcggcg
     1681 tacctcgaac ttgccattcg catcaatggt accttggcga cgcttgaccg cgccttggcg
     1741 cgtgccgccc ggcatttggg cgttgccgtc gtcgcctcct gacggtggat cgagcgtgaa
     1801 tcgcacgaga ccgaacgaag tcgccatcga gctgaacgcc gtgctcgtcg ccctgatcga
     1861 cgatgcgccg caggtgctca ccctgcagga cggggcgctg ttgccgtcgg ggccgtttga
     1921 aagccgccat cccaccctgc agaccggcct gcgggcctgg gtcgagcgcc agacccatca
     1981 tccactgggc tatgtcgagc agctc
//
LOCUS       DASWGA010001026         6696 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1518750, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001026 DASWGA010000000
VERSION     DASWGA010001026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6696
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1518750"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VF991_23450"
     CDS             complement(<1..350)
                     /locus_tag="VF991_23450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEX9559468.1"
                     /translation="MSSAIRAERAAFLGIERSLTGRRWAARLADERTALAMAQRHGLP
                     DAVCRLLAAREVELDGVPDFLEPTLRKFLPDPLHLKDMDAAVARLVRALRAGERIVVF
                     GDYDVDGATSAALLL"
     gene            complement(391..879)
                     /locus_tag="VF991_23455"
     CDS             complement(391..879)
                     /locus_tag="VF991_23455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559469.1"
                     /translation="MRAALIACVLVLLAANGAAGEDGCDRFAWPVDRERELFSDGFVA
                     DVESESALPKDGVFALLLQPVSSVIYMVPPERGRDDGLGGVVTLEWISAGRYQVTLSA
                     DAWIDAVQNDRRLPMLASTSRNDCPGIRQSVQFEVASVPLTLQFGGALVRRLNIAVLR
                     TR"
     gene            complement(893..1888)
                     /gene="glpX"
                     /locus_tag="VF991_23460"
     CDS             complement(893..1888)
                     /gene="glpX"
                     /locus_tag="VF991_23460"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HEX9559470.1"
                     /translation="MVDTGNNTGKMDRNLALEAVRVTEAAALAASKLMGRGDEKKADQ
                     AAVDAMRTTLNSLAIEGTVVIGEGERDEAPMLYIGEKVGIGGPKIDIALDPLEGTTIT
                     AKGLPNALAVMAMAEHGGFLNAPDVYMDKIAVGGGLPDGVVDLDKKPAQNLADLAKAK
                     KVDVADLVVCILDRPRHADLIAKVREAGARIMLIGDGDVSGVIATSTGDSGIDIYMGS
                     GGAPEGVLAAAALRAIGGQMQGRLLFRNEDEKSRARKWGITDLNRKYSMTDMAKGDVM
                     FAATGVTSGSMLKGVRRFSNGAETHSIVMRSKTGTVRWISAHHNFTIKTGLPSWA"
     gene            complement(1920..3212)
                     /locus_tag="VF991_23465"
     CDS             complement(1920..3212)
                     /locus_tag="VF991_23465"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEX9559471.1"
                     /translation="MTSPLRIGIAGLGTVGAGVVKLLAEHGRLLALRGGRPLKLVAVS
                     ARRKAKKRDIDVSGVRWESDPLALASAPDIDVMVELIGGSRGIARRLVQTALRSGKHV
                     VTANKALLALHGAELAALAEKKGAILAFEAAVAGGIPIIKALREGLVGNRVRRLYGIL
                     NGTCNYILTTMRETGRDFDAVLAEAQSAGYAEADPSFDVDGIDAAHKLAVLTGAAFGA
                     KVNFAGVHVEGIRHVSAMDIQFAEELGFRIKLLGLARETKYGIEQRVHPCMVPLAAPI
                     AHIEGVFNAVVVEGDFVGTTMFQGRGAGQGPTASAVVADLVDVARGRHMPAFVVPAAR
                     LATKKISPMARHQGAYYMRLMVQDRPGVISAVSGALAQERISLESMLQRGRSQSGEVP
                     VVLTTHETEEAAMRRALARIAKLKAVAEEPCLIRIEAF"
     gene            complement(3238..4494)
                     /locus_tag="VF991_23470"
     CDS             complement(3238..4494)
                     /locus_tag="VF991_23470"
                     /EC_number="2.6.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HEX9559472.1"
                     /translation="MDDSEFHRLKRLPPYVFAEVNAMKARARGAGQDVIDLGMGNPDL
                     PTAPHIVAKLAEAAANPRAHGYSASRGIPGLRKAQAAYYARRFGVELDAESEIIVTLG
                     SKEGLANLAQAITSPGDIVLVPNPSYPIHPYGFIIAGGSVRHIPVPGSTSLEEFLPAL
                     ERAVRHTVPKPIALVLNYPSNPTAQVVDLDFYAAIVDFCKRERIWILSDLAYAEIYFD
                     GTAPPSVLQVPGARDVAVEFTSMSKTYSMAGWRIGFAAGNKTLIQALTRIKSYLDYGA
                     FTPVQVAATAALNGPQDCVAEARNTYRERRDVLIEGLSAAGWALTSPSASMFAWAPIP
                     KDFAELGSLAFSKLLLSQANVAVSPGVGFGEHGDAHVRIALVENKHRIRQAIRNIRQV
                     MADPGRAIDLYLRGVGDNITPIKARA"
     gene            complement(4514..5089)
                     /locus_tag="VF991_23475"
     CDS             complement(4514..5089)
                     /locus_tag="VF991_23475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559473.1"
                     /translation="MRRQRDLIGNGRLWLGLLGVSALALLSGCGWFGGSPSDSQKARP
                     GVDRKVPATGALPSANPGQQHESGVVATDPAATHQIGSIVPAKGGQKAQKEAIEKEAN
                     ERDAKEREARLKREAEERDAKAKEPKEAPVKTTAGTLPGKPAAAEPGNAEPTATRAPP
                     TAPVTSAPIPPPGTAPTPAPASEQPAAPPRT"
     gene            5245..>6696
                     /locus_tag="VF991_23480"
     CDS             5245..>6696
                     /locus_tag="VF991_23480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9559474.1"
                     /translation="MSETPAPTAIPGLSAAESERMQAALKDIAERSQKLLKEFAERYQ
                     ANGPQPADPMHLTRTFMDFTAKMLADPNRLVQAQVELWQQYMKLWQATAQRMMGQPVE
                     PLVEPAKGDKRFADPAWKDEVVFDYLKQSYLLTARWLQGTVKRVEGIDDKTAQKIDFY
                     TRQFVDALSPSNFVLTNPQVLKATVESKGENLVKGLQNLLTDLERGKGQLAIRQTDMT
                     AFKVGENVATSPGKVVYQNRVMQLLQYAPATAEVYTMPLLIVPPWINKFYILDLKPEN
                     SFIKWATEQGYTVFVISWVNPDEQLSKLSFEDYIKLGPLAALDAIEKATGERRVSAIG
                     YCIGGTLMATTLAYMAARGDERIADCTFFTAQVDFTEPGELGVFIDEDQLASVEALMS
                     KKGYLEGSDMATTFNMLRANDLIWSFVVNNYLLGKSPFPFDLLYWNADSTRMPAAMHS
                     FYLRRMYQQNLLVQPGGVVVDNVPIDLRKISIPV"
BASE COUNT         1080 a         2256 c         2291 g         1069 t
ORIGIN      
        1 agcagcagcg ccgccgaagt ggcgccatcg acgtcgtagt cgccgaacac gacgatgcgc
       61 tcgcccgcgc gcagcgcgcg caccagccgc gccacggcgg cgtccatgtc cttgagatgc
      121 agcgggtcgg gcaggaactt gcgcagggtc ggctcgagga aatccggcac gccgtcgagt
      181 tcgacctcgc gcgccgccag cagccggcac accgcgtcgg gcaggccgtg gcgctgcgcc
      241 atggcaagcg cggtgcgctc gtcggcgagc cgcgccgccc agcgccggcc ggtcagcgag
      301 cgctcgatgc cgaggaaggc ggcgcgttcg gcgcggattg ctgaggacat gccggcacca
      361 tagcgcagac ggctgtggag aaaggttggt ttaccgcgtc cgcaacacgg cgatattgag
      421 ccggcggacc aatgcgccgc cgaactggag ggtgagcggc acgcttgcga cctcgaactg
      481 cacgctttgg cggatgccgg gacaatcgtt gcggctggtc gaagccagca tcggcagccg
      541 ccggtcgttc tgcaccgcgt cgatccaggc atcggccgac aaggtcacct ggtagcggcc
      601 ggcggaaatc cattccagcg tcaccacgcc gcccagcccg tcgtcgcggc cgcgctcggg
      661 cggcaccatg tagatcacgc tgctgaccgg ttgcagcagc agggcgaaga cgccgtcctt
      721 gggcagcgcc gattcgcttt cgacgtcggc cacgaagccg tcggagaaca attcgcgctc
      781 gcggtcgacc ggccaggcga agcggtcgca gccgtcctcg cccgccgccc cgttcgcggc
      841 gagcaggacc aggacacagg cgatcagcgc agcccgcatc gcgccatgat gatcaagccc
      901 agctcggcag gccagtcttg atcgtgaaat tgtgatgcgc ggaaatccag cgtaccgtgc
      961 cggtcttcga gcgcatgacg atcgaatggg tctcggcgcc gttggagaag cggcgcacgc
     1021 ccttcagcat cgagcccgag gtgacgccgg tcgccgcgaa catcacgtcg cccttggcca
     1081 tgtcggtcat cgaatatttg cggttgaggt cggtgatgcc ccatttgcgc gcgcgggatt
     1141 tctcgtcttc gttgcggaac agcagccgtc cctgcatctg cccgccgatg gcgcgcaacg
     1201 ccgccgccgc cagaacgcct tccggcgcgc cgcccgagcc catgtagatg tcgatgcccg
     1261 aatcgccggt cgaggtggcg atcacgcccg agacgtcgcc gtcgccgatc agcatgatgc
     1321 gcgcgcccgc ctcacgcacc ttggctatga ggtcggcatg gcgcggccgg tcgaggatgc
     1381 agaccacgag gtcggcgacg tcgaccttct tggccttggc gaggtcggcc aggttctgcg
     1441 ccggtttctt gtcgagatcg acgacgccgt cgggcaggcc gccgccgacg gcgatcttgt
     1501 ccatgtagac gtcgggcgcg ttgaggaagc cgccatgctc ggccatcgcc atgacggcga
     1561 gcgcattggg caggcccttg gcggtgatgg tggtgccctc cagcggatcg agggcgatgt
     1621 cgattttggg gccgccgatc ccgaccttct cgccgatata gagcatcggc gcctcgtcgc
     1681 gctcgccctc gccgatcacc acggtgcctt cgatggcgag cgaattgagc gtcgtgcgca
     1741 tggcgtcgac ggcggcctgg tcggccttct tctcgtcgcc gcggcccatc agcttggagg
     1801 ccgcaagggc cgccgcctcg gtcacgcgca ccgcctcgag cgccaggttg cggtccatct
     1861 tgccggtgtt gttgcccgtg tcgaccatcg cttcctccgt cggcgtctgt gcgcgccgtc
     1921 taaaacgctt cgatcctgat caggcagggc tcctcggcca ccgccttgag cttggcgatg
     1981 cgggccagcg cgcgccgcat cgccgcctct tccgtctcat gcgtggtcag cacgaccggc
     2041 acctcgccgg attgcgagcg gccgcgctgc agcatcgatt ccagcgagat gcgctcctgg
     2101 gccagtgcgc ccgacaccgc cgagatcacg cccggccgat cctgcaccat cagtcgcata
     2161 taataagcgc cctgatggcg ggccatcggc gagatcttct tggtcgcgag ccgcgccgcc
     2221 ggcacgacga aggccggcat gtggcggccg cgcgccacgt cgaccaggtc ggcgacgacg
     2281 gccgaggcgg tcggcccctg ccccgcgccg cggccctgga acatggtggt gccgacgaaa
     2341 tcgccctcga cgacgacggc gttgaacacg ccctcgatat gggcgatcgg cgcggcgagc
     2401 ggcaccatgc agggatgcac gcgctgctcg atgccgtatt tggtctcgcg cgccaggcct
     2461 agaagcttga tgcgaaagcc cagctcctcg gcgaactgga tgtccatcgc gctgacatgg
     2521 cggatgcctt cgacatggac gccggcgaag ttcaccttgg cgccaaaggc ggcaccggtc
     2581 agaaccgcaa gcttgtgggc ggcgtcgatg ccgtcgacgt cgaagctggg atcggcctcg
     2641 gcgtagcccg ccgactgcgc ctcggccagc accgcgtcga agtcgcggcc ggtctcgcgc
     2701 atggtcgtca ggatgtagtt acaggtgccg ttcaggatgc cgtagaggcg gcgcacccgg
     2761 ttgccgacca ggccctcgcg cagcgccttg atgatcggga tgccgcccgc caccgccgcc
     2821 tcgaaggcga ggatggcgcc cttcttctcg gccagcgccg cgagctcggc gccatgcagg
     2881 gcaagcagcg ccttgttggc ggtgacgacg tgcttgcccg agcgcagcgc ggtctgcacc
     2941 agacggcggg cgatgccgcg cgagccgccg ataagctcga ccatgacgtc gatgtcgggc
     3001 gccgatgcga gcgccagcgg gtcggattcc cagcgcacgc cggaaacatc gatgtcgcgc
     3061 ttcttcgcct tgcggcgggc gctgaccgcg acgagtttca gcggccggcc gccgcgcagc
     3121 gcaagcagcc ggccgtgctc ggccaacagc ttgacgacgc cagcgcccac ggtgccgagg
     3181 ccggcgatgc cgattctgag aggggaagtc atggcgggct gatacgacag gatgcgctca
     3241 ggcgcgagct ttgatcggcg tgatgttgtc gcccacgccg cgcaggtaga ggtcgatggc
     3301 gcggccggga tcggccatca cctggcggat gttgcggatg gcctggcgga tgcgatgctt
     3361 gttctcgacc agggcgatgc gcacgtgggc atcgccatgc tcgccgaagc cgacgcccgg
     3421 cgagaccgcg acattggcct ggctcagcag cagcttcgag aaggcaagcg agcccagctc
     3481 ggcgaaatcc ttggggatcg gcgcccacgc gaacatgctg gccgacggcg aggtcagcgc
     3541 ccagccggcg gcgctcagcc cctcgatcag cacgtcgcgg cgttcgcgat aggtgttgcg
     3601 cgcctcggcg acgcaatcct gcgggccgtt gagcgccgcc gtggccgcca cctggaccgg
     3661 cgtgaaggcg ccgtagtcga ggtaggattt tatgcgcgtc agcgcctgga tcagggtttt
     3721 gttgccggcg gcgaagccga tgcgccagcc cgccatcgaa taggtcttgc tcatcgaggt
     3781 gaactcgacg gcgacgtcgc gcgcgcccgg cacctgcagc accgagggtg gcgcggtgcc
     3841 gtcgaaatag atctcggcat aggccaggtc gctcaggatc cagatgcgct cgcgtttgca
     3901 gaaatcgacg atcgccgcat agaaatcgag atcgaccacc tgcgccgtcg ggttcgacgg
     3961 atagttcagc accagcgcga tcggcttggg caccgtgtgg cgcaccgccc gttcgagcgc
     4021 cggcaaaaat tcctcgagcg aggtgctgcc cggcaccgga atgtggcgca ccgagccgcc
     4081 ggcaatgatg aagccgtagg gatggatggg atagctcggg ttgggcacca gcacgatgtc
     4141 gcccggcgag gtgatggcct gggcgagatt ggcgaggcct tccttcgagc ccagggtgac
     4201 gatgatctcg ctctcggcat cgagctcgac gccgaagcgg cgcgcgtagt aggccgcctg
     4261 cgccttgcgc aggccgggaa tgccgcgcga cgccgagtaa ccatgagcgc gcgggttggc
     4321 ggcggcttcg gcgagcttgg cgacgatatg cggcgcggtc ggcaggtcgg gattgcccat
     4381 gccgagatcg atcacgtcct ggccggcgcc gcgggcgcgc gccttcatgg cgttgacctc
     4441 ggcgaacacg tagggcggca ggcgcttcag ccggtggaat tccgaatcgt ccattgcgtg
     4501 cggtccttgg gcgctaggta cggggcggcg cggccggctg ttccgatgcg ggtgcgggcg
     4561 tcggtgcagt cccgggcggc gggatcggcg ccgacgtcac gggtgcggtc ggcggcgccc
     4621 tggttgccgt cggctcggcg ttgcccggct cggccgccgc cggcttgccg ggcagcgtcc
     4681 cggcggtcgt cttgaccggc gcctccttcg gctccttggc cttggcgtca cgctcctcgg
     4741 cctcgcgttt gaggcgcgcc tcgcgttcct tggcatcgcg ctcgttggct tccttttcga
     4801 tcgcctcctt ctgcgccttc tggccgccct tggccggcac gatcgagccg atctggtgcg
     4861 tggccgccgg gtcggtggcg acgacgcctg actcgtgctg ctggcccgga ttggccgagg
     4921 gcagcgcgcc ggtggcgggg accttgcggt cgacgcccgg ccgcgccttc tggctgtcgg
     4981 acggcgagcc gccgaaccag ccgcagcccg acaacagcgc cagggccgac acgccgagca
     5041 ggccaagcca cagccggccg ttgccgatca ggtcccgttg tcgccgcatc gtcgtcaccc
     5101 gctggtaaat ttgacccgtc tgttatcgca gcctacctat gaaggctact ggcagcctgg
     5161 aacgacaaac actaggtata gtaccgggac gccgaaagta tcgcaagaaa cgccgcaaag
     5221 gcaatgattc ggaaggggaa acgcatgtcg gagacgccgg ccccaacggc cattccggga
     5281 ctgtcggcgg ccgaatccga aaggatgcag gccgcgctca aggacatcgc cgagcgcagc
     5341 cagaagctct tgaaggaatt cgccgagcgc tatcaggcca acggcccgca gcccgccgat
     5401 cccatgcacc tcacgcgtac cttcatggac ttcaccgcca agatgctggc cgaccccaac
     5461 cggctggttc aggcgcaggt cgagctgtgg cagcagtaca tgaagctgtg gcaggccacc
     5521 gcgcaacgca tgatgggcca gccggtcgag ccgctcgtcg agccggccaa gggcgacaag
     5581 cgcttcgccg atccggcgtg gaaggacgag gtcgtcttcg actacctgaa gcagtcctat
     5641 ctgctcaccg cgcgctggct gcagggcacc gtcaagcggg tcgagggcat cgacgacaag
     5701 accgcgcaga agatcgactt ctacacccgc cagttcgtcg acgcgctgtc gccgtcgaac
     5761 ttcgtactca ccaatccgca ggtgctcaag gccacggtcg agtccaaggg cgagaacctg
     5821 gtgaagggcc tgcagaacct cttgaccgac ctcgagcgcg gcaagggcca gctcgccatc
     5881 cgccagaccg acatgacggc cttcaaggtc ggcgagaacg tcgccacctc gcccggcaag
     5941 gtcgtctacc agaaccgggt gatgcagctc ctgcagtacg cgccggccac ggccgaggtc
     6001 tacacgatgc cgttgctgat cgtgccgccg tggatcaaca agttctacat cctcgacctc
     6061 aagccggaga actcgttcat caagtgggcg accgagcagg gctacacggt gttcgtgatc
     6121 tcctgggtca atcccgacga gcagctcagc aagctcagct tcgaggacta tataaagctg
     6181 ggcccgctcg ccgccctcga cgccatcgaa aaggcgaccg gcgagcgccg cgtctcggcg
     6241 atcggctact gcatcggcgg caccttgatg gcgacgacgc tggcctacat ggcggcgcgc
     6301 ggcgacgagc ggatcgcgga ctgcaccttc ttcaccgccc aggtcgactt caccgaaccg
     6361 ggcgagctcg gcgtgttcat cgacgaggac cagctggcca gcgtcgaggc gctgatgagc
     6421 aagaagggct acctcgaagg cagcgacatg gcgacgacct tcaacatgct gcgcgccaac
     6481 gacctgatct ggtcgttcgt cgtcaacaac tacctgttgg gcaaatcgcc cttcccgttc
     6541 gatctgctgt attggaacgc cgattcgacg cggatgccgg cggcgatgca cagcttctac
     6601 ctgcgccgga tgtaccagca gaacctgctg gtgcagccgg gcggcgtggt ggtcgacaac
     6661 gtgccgatcg acctcaggaa gatctcgatc ccggtc
//
LOCUS       DASWGA010001027         2153 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_361560, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001027 DASWGA010000000
VERSION     DASWGA010001027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361560"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1421
                     /locus_tag="VF991_23485"
     CDS             <1..1421
                     /locus_tag="VF991_23485"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9559475.1"
                     /translation="GENGAGKSTLCNLIFGVYELSAGHMTFGGAPWAPTSPAEALERG
                     IAMVHQHFSLVPRMTVVENLMLGQVKGMLHRHEFGVRIRDIAERFGFALDPGAVVGEL
                     SVGERQRAEIVKCLMRDPKLLVLDEPTAVLPPGEIGALLDICRRVADSGRAVILVTHK
                     LAEIARVADRVAVLRGGRLVADESMANADMGALVHAMVGREVKPLDVALAEPGEVPAT
                     EASTPRGFALVCDGLTVEDRHGAVRLDNFTLEIRPGEVVGLAGVEGNGQSELGMVLAG
                     LLRPTEGQFYIGGAELTHAGAAAVTAAGGGIVPEDRHAVACVTGMSVAENMFLNKLDQ
                     FTRFGLLQRRALNEATRGLMRIFDVRAAGPEVVFSGLSGGNQQKAVLARELTVDPLVA
                     LVAAQPTRGLDVSAVEAVYRQIRAAARRGVGVLLISSELDELLAVADRVAVLYRGRLV
                     GERPAAMKERSAIGALMSGQLS"
     gene            1418..>2153
                     /locus_tag="VF991_23490"
     CDS             1418..>2153
                     /locus_tag="VF991_23490"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9559476.1"
                     /translation="MTALALALPDRRRLAGISIPFAAVVGSMAIGLLLIAASGKSVPD
                     AIDAFLDGAFGTAFAFGASVNRAVALSLVGLGFILAFRANLTNVGGEGQIAVGGITAA
                     ALALWPPIAGLPLGLAVIVPLLGGTLAGAFWGGIAGFMKVKFGTNEVISTLLLGFVAL
                     LMVYWCVQSTALLRQPQTSSATLPESLPIPDSTKLPGLTGDPESPLHVGLIICLVLAV
                     VTAVVLQRSTFGLRLRAIGLNELAARR"
BASE COUNT          270 a          747 c          764 g          372 t
ORIGIN      
        1 tgggcgagaa cggcgccggc aagtcgacgc tctgcaacct gatcttcggc gtctacgagc
       61 tcagcgccgg acatatgacc ttcggcggcg cgccatgggc gccgacaagt ccggccgagg
      121 cgctcgagcg cggcatcgcc atggtgcatc agcatttcag cctggtgccg cgcatgaccg
      181 tggtcgagaa cctgatgctg ggccaggtca agggcatgct gcaccgccac gaattcggcg
      241 tccgcatccg cgacattgcc gagcgctttg gcttcgcact cgatcccggc gcggtggtgg
      301 gcgagctctc ggtcggcgag cgccagcgcg ccgagatcgt gaaatgcctg atgcgcgatc
      361 ccaagcttct ggtgctcgac gagccgaccg ctgtcctgcc gccgggcgag atcggcgctt
      421 tgctcgacat ttgccgccgg gtggccgatt ccggccgtgc cgtcatcctg gtgacgcata
      481 agctcgccga gatcgcccgc gtcgccgacc gggtcgccgt gctgcgcggc ggccggctgg
      541 ttgccgacga gagcatggcc aacgccgaca tgggcgcgct ggtccacgcc atggtcggcc
      601 gcgaggtcaa gccgctcgac gtggcgctag ccgagcccgg cgaggtgcct gctaccgagg
      661 cgtccacgcc gcgtggcttc gccctggtgt gcgatggcct caccgtggag gaccgccatg
      721 gcgcggtgcg actcgacaat ttcaccctgg agatccgccc cggcgaggtg gtcggcctgg
      781 ccggcgtcga gggcaacggc cagagcgagc tcggcatggt gctggcgggc ctgctgcggc
      841 cgaccgaagg tcaattctat atcggcggcg ccgagctcac ccatgccggc gcggccgccg
      901 tgacggcggc gggcggcggc atcgtgccgg aagaccgcca tgccgtggct tgtgtcaccg
      961 gcatgtcggt ggccgagaac atgtttttaa acaagctcga tcagttcacg cgcttcggcc
     1021 tgttgcagcg gcgcgcgttg aacgaggcga cgcgcggctt gatgcgcatc ttcgacgtgc
     1081 gcgcggccgg acccgaggtc gtcttctcgg gcctctcggg cggcaaccag cagaaagcgg
     1141 tgctggcgcg cgagctcacg gtcgatccgc tggtcgcgct ggtcgcggcg cagccgacgc
     1201 gcggcctcga tgtcagcgca gtcgaggcgg tctatcgcca gatccgcgcc gccgcccgcc
     1261 gcggcgtcgg cgtgctcctg atttcgagcg agcttgatga gcttttagcc gtcgccgacc
     1321 gcgtggccgt actctatcgc ggccggctgg tcggtgagcg gccggcggcg atgaaggaac
     1381 gcagcgccat cggcgccctg atgtcgggcc agctttcatg accgcgcttg cgctcgcgct
     1441 gcccgatcgc cgccgcctcg ccggcatctc catcccgttc gccgctgtcg tcggttcgat
     1501 ggcgatcggc ctgctgctga tcgccgccag cggcaagtcg gtgcccgacg cgatcgacgc
     1561 cttcctcgac ggcgccttcg gcacggcctt cgccttcggc gcttcggtca accgcgccgt
     1621 ggcgctgtcg ctggtcgggc tgggcttcat cctggccttc cgtgccaacc tcaccaacgt
     1681 gggcggcgag ggccagatcg cggtcggcgg catcaccgcc gccgcactgg cgctgtggcc
     1741 gccgatcgcc ggcctgccgc tgggactggc cgtgatcgtg ccgctgctgg gcggcacgct
     1801 cgccggcgcg ttttggggcg gcatcgcggg cttcatgaag gtgaagttcg gcaccaacga
     1861 ggtgatcagc acgctgctgc tgggcttcgt ggcgctgctg atggtctatt ggtgcgtcca
     1921 gtcgacggcc ttgctgcgcc agccgcagac ctcgtcggcg accctgccgg agtcgctgcc
     1981 gattccggac tcgaccaagc tgcccggcct gaccggcgat cctgaatcgc cgctgcatgt
     2041 cggcctgatc atctgcctcg tgctggcggt cgtcacggcc gtggtgctgc agcgctcgac
     2101 cttcggtctg cgcctgcgcg ccatcgggct gaacgagctg gcggcacgcc gcg
//
LOCUS       DASWGA010001028         2275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2400621, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001028 DASWGA010000000
VERSION     DASWGA010001028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2400621"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            400..>2275
                     /locus_tag="VF991_23495"
     CDS             400..>2275
                     /locus_tag="VF991_23495"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX9559477.1"
                     /translation="MSARLAVDIGGTFTDVVLERDGTAHAIKVLTTTDAPERGVMEGV
                     RTILAEAKCRPADVGLVVHGTTLATNALIERKGAHTALITTEGFRDSLEIAWEHRFEQ
                     YDIYMERPEPLVPRDLRFGVPERVAADGAVLLALDEQAVRDVAAELRRRQIEAVAVCF
                     LHSFTTEAHERRTGAILAEELPGVAISLSCEVCPEIREYERTSTTIANAYVLPRMAGY
                     LGALEDDLKKEGIAGPLLLMMSSGGITTVDTARRYPVRLIESGPAGGAILALTVAAEN
                     GLAKAVAFDMGGTTAKLTLLDDLSLQRSRQFEVARAYRFAQGSGLPVRIPVIELVEIG
                     AGGGSIARLDALGRLQVGPDSAGSVPGPASYGRGGTAPTVTDADTALGRLDPKRFAGG
                     AIPLYRDKAEAALQSLAAPLKTDAQGAAAGVAEIVDETMASAARVHAVENGKDTADRT
                     LIAFGGAAPLHAARLARKLGMKQVIVPVGAGVGAAFGFLRASIAYEVVRTRHVRLDLF
                     DAKMLNELFTNMRAEAEAVVRPAAPGEALVETRQAFMRYRGQGHEIAVALPNQPFAAN
                     AARELHRRFEATYETVFGRAIPKLEVEALTWTLSIATARPLPQPAGAAAPASAPAPNG
                     R"
BASE COUNT          379 a          802 c          769 g          325 t
ORIGIN      
        1 aaaagggtag cggaaagtgc ggaaacccct gccgatgccg attctgccga tgtttgggcc
       61 gcgccgatgc ctgcgctgtc ggggtagcgg aaagtgcgca aagtcccaaa gcgcgcgacg
      121 cgaaaccggg agattggcaa aacctgtcca ccacttaggt cgctgtgccg ggctcaaaga
      181 gaagttcgac ggcggtacgg tgccatcctc tgccgaaagc ggcgtgaaaa gtgttagcgg
      241 aaattgcggg aaatgcggaa attcactcca aagctcgcaa cgcgaaaccg gcgcgttggc
      301 aaaacctgtc tacgacttag acagagcgaa aagaggagtc gccttgcaca acagtcgtag
      361 gaatctggtc cgccgcggca atatcaagat cgacgactga tgtccgctcg cctcgccgtc
      421 gatatcggcg gtacttttac cgacgtcgtc ctcgaaaggg acggcaccgc ccatgccatc
      481 aaggtgctca ccacgacaga cgcgcccgaa cgcggcgtca tggagggcgt gcgcaccatc
      541 ctggccgagg ccaaatgccg gccggccgac gttggcctgg tcgtgcacgg cacgacgctc
      601 gcgaccaatg ccctgatcga gcgcaagggc gcccacacgg ccctgatcac gaccgagggc
      661 ttccgcgatt cgctggagat cgcctgggag caccgcttcg aacagtacga catctacatg
      721 gagcggcccg agccgctggt gccgcgcgac ctgcgcttcg gcgtgcccga gcgcgtggcg
      781 gccgacggcg ccgtgctttt ggcgctcgac gagcaggcgg tgcgcgacgt cgcggccgag
      841 ctcaggcgcc gccagatcga agcggtagcc gtctgcttcc tgcacagctt caccactgaa
      901 gcgcacgagc ggcgcaccgg cgccattctc gccgaagagc tgcccggcgt agcgatttcg
      961 ctcagctgcg aggtctgtcc cgagatccgc gagtacgagc gcacctcgac caccatcgcc
     1021 aacgcctacg tcctgccgcg catggcgggt tatctcggcg cactcgaaga cgacctcaag
     1081 aaggaaggca tcgccggccc cctgctgctg atgatgtcgt cgggcggcat caccacggtc
     1141 gacacggcgc ggcgctatcc ggtgcgcctg atcgaatcgg gcccggccgg cggcgccatc
     1201 ctggcgctga ccgtggcggc ggagaacggc ctggcaaagg ctgtcgcctt cgacatgggc
     1261 ggcaccacgg ccaagctcac cctgctcgac gatctaagct tgcaacgctc gcgccagttc
     1321 gaggtggcgc gcgcctatcg cttcgcgcag ggcagcggcc tgccggtgcg catcccggtg
     1381 atcgagctgg tcgagatcgg cgccggcggc ggctcgatcg cccgcctcga tgcgctgggc
     1441 cgcctgcagg tcggtcccga ttcggcaggc agcgtgcccg gcccggcaag ctacggccgc
     1501 ggcggcaccg cgcccacggt gaccgatgcc gacaccgcgt tgggccggct cgatcccaag
     1561 cgcttcgccg gcggcgccat tccgctttat cgcgacaagg ccgaggcggc gctgcagtcg
     1621 ctcgcggcgc cgctcaagac cgatgcccag ggcgcggcgg ccggcgtggc cgagatcgtc
     1681 gacgagacga tggcgagtgc ggcccgcgtg cacgccgtcg agaacggcaa ggacaccgcc
     1741 gatcgcaccc tgatcgcctt cggcggtgcc gccccgctgc atgccgcgcg gctcgcccgc
     1801 aagctcggca tgaagcaggt catcgtcccg gtcggcgccg gcgtcggcgc ggccttcggc
     1861 ttcctgcgcg cgtcgatcgc ctacgaggtc gtgcgaacgc gccacgtccg gctcgacctg
     1921 ttcgacgcca agatgctgaa cgagctgttc accaacatgc gcgccgaggc cgaagccgtc
     1981 gtgcggccgg ccgcgccggg cgaggcgctg gtcgagaccc gccaagcctt catgcgctat
     2041 cgtggccagg gccacgagat cgccgtcgcc ctgcccaatc aaccgttcgc cgccaacgcc
     2101 gcgcgcgagc tgcaccgccg cttcgaggcg acctacgaga cggtgttcgg ccgcgccatt
     2161 cccaagctcg aggtcgaggc gctgacctgg acgctgtcga tcgccacggc gcggccgctg
     2221 ccgcagcccg ccggcgcggc ggcgcctgcg agcgcgccgg cgccgaacgg ccggc
//
LOCUS       DASWGA010001029         3991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1009784, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001029 DASWGA010000000
VERSION     DASWGA010001029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3991
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1009784"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VF991_23500"
     CDS             <1..345
                     /locus_tag="VF991_23500"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9559478.1"
                     /translation="LIGSAGPTAYTASKGAVRLLSKSVALYCAEQKYNIRCNSVHPGG
                     VDTPIFNPLWQAMGHEQGKAFIGSRHPIGRMAEPVDLGQVVLWLASDRSSFVTGAEIV
                     ADGGLTAGLMKR"
     gene            350..1108
                     /locus_tag="VF991_23505"
     CDS             350..1108
                     /locus_tag="VF991_23505"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX9559479.1"
                     /translation="MPRLENKVVLVSGGASGIGAETARLVAREGGKAVVADRDEARGR
                     ALAAELGDAALFVTLDVTQEAGWQNAVAASVERFGGLHGLLNAAGVGVRNSIEDCTLE
                     EYRRVNDINALGTFLGCKMAIPAIKQSGGGSIVNISSVLGLRGASYALAYCASKGAVR
                     TLTKNVALHCAQMKYDIRCNSVHPGYIDTPMIAPRLDQTIDNMSGRQWLEELHPLGRL
                     GRPEEVANMILFLLSDESTFSTGSEFVCDGGLTA"
     gene            complement(1110..1550)
                     /locus_tag="VF991_23510"
     CDS             complement(1110..1550)
                     /locus_tag="VF991_23510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559480.1"
                     /translation="MSLPRPEAGLVVRYSYLWHAEHIQGREEGTKDRPCAIILAIAGK
                     KAGRYRVWLLPVTHLEPVDAEEAVEIPAPVKRRLGLDSERSWVVLSEWNECLWPSADL
                     RPTSRHKGASVAYGLLPPKFFDYLRRRFLVLVEKRKARRVERTE"
     gene            complement(1547..1822)
                     /locus_tag="VF991_23515"
     CDS             complement(1547..1822)
                     /locus_tag="VF991_23515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEX9559481.1"
                     /translation="MTDRVRVTASEFHRAFGALSDKALKEPISITKQGRDHLVLMSAQ
                     EYSRLKRGRRVVGLAEDLPDSALKLIRRARMPRRHKHLDAELKNWKP"
     gene            complement(1865..2746)
                     /locus_tag="VF991_23520"
     CDS             complement(1865..2746)
                     /locus_tag="VF991_23520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9559482.1"
                     /translation="MPFARTDDAVKLYYEETGAGAPMVFVHEFAADHRSWELQMRHFG
                     QRYRCVTFGARGYLPSDVPEKPESYSQNRATDDILAVMDHLKIDKAHVVGLSMGGFAT
                     LHFGFRHPTRALSLVVAGVGYGAEKDQQAKFRGEVEVVARSLTTEGMEKFAAKYAYGP
                     TRVQFENKDPRGFAQFKKELAEHSAPGSANTQLGVQAQRPSLYDLLDKMRAMTMPTLI
                     LTGDEDWPCLAPSVLMKREIPSAALAVMPNCGHTINLEDPDLFNQIVGDFIVQVEAGR
                     WPKRDPRAMSASITGMR"
     gene            2816..3559
                     /locus_tag="VF991_23525"
     CDS             2816..3559
                     /locus_tag="VF991_23525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe dioxygenase family protein"
                     /protein_id="HEX9559483.1"
                     /translation="MSEIGTGLQNATGIRQAVARAGYAFVEASDMRNALSRFGTLSDW
                     TQFAESWNDLEVDTYMADGGRYRRRRFAVYAAQRQGPIVRGPHQPHFQTLDYNQLNGG
                     IERWFKPVSEEIGSGASMRTILEYCRALFGRLAPETARWHIEVHQFRIEARPGEQGKP
                     TPEGMHRDGVDYVLVLLVNRRNIMSGTTTVHDLDKRTLGSFTLTDPLDAALVDDARRY
                     HGVTPVEPENPAQPAYRDVLVVTFRKSTK"
     gene            complement(3560..>3991)
                     /locus_tag="VF991_23530"
     CDS             complement(3560..>3991)
                     /locus_tag="VF991_23530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9559484.1"
                     /translation="KIMQNNILSNIWLINLCVPDMWAKKDGSVIIVSSIGGVRASTVI
                     GAYCISKAADMQLARNLAAELGPDNIRVNTIAPGLVRTDFARALWENPEYLNKRLQTA
                     PLRRIGEPDDIGGIAVMLAGKAGAFITGQTIIADAGVTIGS"
BASE COUNT          700 a         1292 c         1305 g          694 t
ORIGIN      
        1 ctcatcggct cggcgggacc gaccgcctat accgccagca agggcgcggt gcggctgctc
       61 agcaagagcg tggcgctcta ctgcgccgag cagaaataca atatccgctg caattcggtt
      121 catcccggcg gtgtcgacac gccgatcttc aacccgctgt ggcaggcgat gggccacgaa
      181 caaggcaagg cgttcatcgg ctcgcgccat ccgatcgggc gcatggccga gccggtcgat
      241 ctgggccagg tcgtgctgtg gctcgcctcg gaccgctcga gcttcgtcac cggcgcggag
      301 atcgtggccg atggcgggct gacggcgggc ctgatgaaaa ggtagcacca tgccccgtct
      361 cgagaacaag gtcgtgctgg tgagcggcgg cgcgtcgggc atcggcgccg aaaccgcccg
      421 gctggtcgcc cgcgagggcg gcaaggcggt cgtggccgac cgcgacgagg cccggggtcg
      481 cgcgcttgcg gccgagctgg gcgacgcggc gctgttcgtg accctggacg tcacccagga
      541 agcgggctgg cagaacgcgg tcgccgccag cgtcgagagg ttcggtggcc tgcacggcct
      601 cctgaatgcc gctggcgtcg gcgtgcgcaa ctcgatcgag gactgcacgc tggaggaata
      661 ccggcgggtc aacgacatca atgcgctggg cacgttcctc ggctgcaaga tggccatccc
      721 ggccatcaag cagtcgggcg gcggctcgat cgtcaacatc tcctcggtgc tcggcctgcg
      781 cggcgcctcc tacgccctgg cctactgcgc cagcaagggc gcggtgcgca cgctgaccaa
      841 gaacgtggcg ctgcactgcg ctcagatgaa atacgacatc cgctgcaact cggtgcatcc
      901 cggctacatc gacacgccga tgatcgcgcc ccgcctcgac cagaccatcg acaacatgag
      961 tggccggcaa tggctcgagg agctgcaccc gctcggccgc ctcggccggc ccgaggaggt
     1021 ggcgaacatg atcctgttcc tgttgtctga cgaatcgacc ttttcgaccg ggtccgagtt
     1081 cgtctgcgac ggcgggctga cggcgtgatc tactcagtcc gctcgacacg acgcgccttg
     1141 cgtttctcaa ccaaaaccag gaagcgccgc cttagataat cgaagaattt gggtggtaga
     1201 agtccgtagg cgacggatgc gcccttgtgc cggctggtag gacgcagatc cgcgctcggc
     1261 cagaggcact cgttccattc actcaatacg acccacgatc gctcgctgtc caatccaaga
     1321 cgacgcttca ctggcgcagg aatttcgacg gcttcttcgg catcgacagg ctcaaggtgt
     1381 gtgactggca acagccagac gcggtaccgg ccagccttct tgccagcgat agcgagaatg
     1441 atggcgcacg gtcggtcctt ggtaccttcc tctcgtccct gaatatgctc agcgtgccat
     1501 agataactgt atcgcacgac gagaccggcc tcgggacgag gcaggctcaa ggcttccagt
     1561 tctttagttc cgcatcgaga tgcttatgcc gccgaggcat gcgggcgcgc ctgatcagct
     1621 tgagcgccga atcaggaaga tcctcggcca ggccaacgac ccgacggccg cgcttcagtc
     1681 gggaatattc ctgggccgac atgagaacca aatgatcccg cccctgtttg gtgatcgaga
     1741 tcggctcctt taacgcctta tcactcaagg cgccgaaggc cctatggaac tcgctggcag
     1801 tgacgcgaac tctgtcagtc atagacctag aatatggaaa atgcgcaatc tgcgcaaacc
     1861 ttcgctaccg cattcccgtg atcgaggcgc tcatcgctcg gggatcgcgc ttgggccagc
     1921 ggccggcctc gacctggacg atgaagtcgc cgacgatctg gttgaagagg tcgggatcct
     1981 cgagattgat ggtgtggccg cagttcggca tcacggccag cgccgccgac gggatctcgc
     2041 gcttcatcag caccgagggc gcgagacacg gccaatcctc gtcgccagtc aggatcaggg
     2101 tcggcatggt catggcgcgc atcttgtcga gaagatcgta gagcgacggc cgctgagcct
     2161 gcacgcccaa ttgggtgttg gccgagcccg gcgccgaatg ctcggcgagc tccttcttga
     2221 actgggcgaa gccgcgcggg tccttgttct cgaactgcac gcgcgtgggg ccgtaggcgt
     2281 atttcgccgc gaacttctcc atgccttcgg tcgtcaacga cctggcgacg acctcgacct
     2341 cgccgcggaa cttcgcctgc tgatccttct ccgcgccgta gcccacgccc gccacgacca
     2401 gcgacagcgc ccgcgtcgga tggcggaagc caaaatgcaa cgtcgcgaag ccgcccatcg
     2461 acaggccgac gacgtgcgcc ttgtcgatct tgaggtggtc catgaccgcc aaaatgtcgt
     2521 cggtggcgcg gttctgcgag tagctttcgg gcttctcggg cacgtcggac ggcagatagc
     2581 cgcgcgcgcc gaacgtgacg cagcggtagc gctggccgaa atggcgcatc tggagttccc
     2641 acgagcggtg gtcggcggcg aactcgtgga cgaagaccat gggggcgccg gcgccggtct
     2701 cctcgtagta gagcttcacg gcgtcatcgg tcctggcaaa tggcatggtt ttctccgggt
     2761 cgggcctgac tttagctcat atggcagtcc tgtggcgcgg tgataggctg tgtccatgag
     2821 cgagatcgga accggcctgc agaacgccac gggcatccgc caggcggtgg cccgcgcggg
     2881 atacgctttc gtcgaggcct ccgacatgcg caacgcgttg tcgcggttcg gcacgctgtc
     2941 cgactggacc cagttcgccg agagctggaa cgatctcgag gtcgacacct acatggccga
     3001 tggcggccgc tatcgccgcc gccgcttcgc ggtttatgcc gcccagcgac agggcccgat
     3061 cgtgcgcggg ccgcaccagc cgcatttcca gacgctcgac tacaaccagc tgaacggcgg
     3121 catcgagcgc tggttcaagc cggtcagcga ggagatcggc agtggcgcgt cgatgcgtac
     3181 catcctcgaa tattgccgcg ccctgttcgg caggctggcg cccgagacgg cgcgctggca
     3241 catcgaggtc caccagttcc gcatcgaggc gcgcccgggc gagcagggca agcccacgcc
     3301 cgagggcatg catcgcgacg gcgtggacta cgtgctggtg ctgctggtca accgccgcaa
     3361 catcatgagc ggcaccacga cggtgcacga cctcgacaag cgcaccttgg gcagcttcac
     3421 gttgaccgat ccgctggacg ccgccctggt cgacgacgcg cgccgctatc acggcgtgac
     3481 gccggtcgag ccggaaaacc ccgcccagcc cgcctatcgc gacgtgctgg tggtgacgtt
     3541 caggaaatcg acaaaatagc tagctcccga tcgtcacccc cgcatcggcg atgatggtct
     3601 ggccggtgat gaaggcgccg gccttgcccg cgagcatgac ggcgatgccg ccgatatcgt
     3661 cgggctcgcc gatgcgccgg agcggcgcgg tctgcaggcg cttgttgagg tactcgggat
     3721 tctcccacaa ggcgcgggca aagtcggtcc tgaccaggcc gggcgcgatg gtgttgacgc
     3781 gaatattgtc ggggccgagc tcggctgcga ggttgcgcgc gagctgcatg tcggctgcct
     3841 tggagataca ataggcgccg atcaccgtgc tcgcccgcac gccgccgatc gacgacacga
     3901 tgatcaccga tccgtccttc ttggcccaca tgtcgggcac gcagagattg atcagccaga
     3961 tgttgctgag gatgttgttc tgcatgatct t
//
LOCUS       DASWGA010001030         3309 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1261030, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001030 DASWGA010000000
VERSION     DASWGA010001030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3309
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1261030"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VF991_23535"
     CDS             complement(<1..417)
                     /locus_tag="VF991_23535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559485.1"
                     /translation="MAWAGAAPTQTTYNWSDIDCRQSRIAFWPGLRCKTTNVVTTEGN
                     VGAFRRWSVEGTTSEGYIHIFLWEAQNSFSYLTTDETTADFLKWMYVNGQSASGFSPV
                     ARFHEADYSTFSDTKQARTCAGFRRIGNQRRGGYDWI"
     gene            complement(545..1015)
                     /locus_tag="VF991_23540"
     CDS             complement(545..1015)
                     /locus_tag="VF991_23540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9559486.1"
                     /translation="MKIRRVVTGHDGSGKATVAIDEISRDVVSYRPGAIIANIWSTAG
                     FPVDNAGTADGAKEITATTRDDGTVFRVIEYAPGVTPRNHRTNSIDYAVVLSGEIDME
                     LDDQVVTLRAGDVLVQRGTIHNWVNRSNAPCVVAFVLIDARPVEQGGKILAARG"
     gene            complement(1022..2206)
                     /locus_tag="VF991_23545"
     CDS             complement(1022..2206)
                     /locus_tag="VF991_23545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX9559487.1"
                     /translation="MSVEPPLKGIRVVELSHTILGPSCGMILADLGAEVIKVEPVDGD
                     RTRKLRGFGGGFFGYFNRNKKSLALDADAPEGRAVLIKLLQSADVMIENFAPGSMSKR
                     GLGAVHLEKINPRLVYCALKGFLPGPYEKRPALDEVVQMMGGLAYMTGPTGRPLRAGT
                     SVVDIVGGMFGAFGTVLALKMRERTGKGGLVESALFESVVFLMGQHLAITAMNSAPPP
                     PMPERVSSWAIYEIFTTADRQQVFIGITSDGQWKRFCEFFKQPELAADPKLATNNLRI
                     EARPWLVPKVAEVFKRYDKETLEGLCLEADISFAPVARPQDLFDDPHLLANGSLAPTT
                     LPGGVKTRLPLLPFQMLGWRPPLTMDPPEIGQHNDEVLAEIGYDAGQITALKSAGLLG
                     PR"
     gene            complement(2356..2994)
                     /locus_tag="VF991_23550"
     CDS             complement(2356..2994)
                     /locus_tag="VF991_23550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559488.1"
                     /translation="MGDRFDRLGVRHANVEALLRRPGIGHNNGPTFDMSWEAWVWRRA
                     AAKAWKTPKPEVAMMRLKRAERLGITYKELASVIMDSGAHLGAAVLPLSLAARVRRGP
                     GREVIVEPRNSVAALLAKFRGRLFVLGDIDAVPGLSDAERADFLAVLNRAFDGKVEAI
                     GWGHDGRAIRRMLKANALPHQEAFLVGAGMAHRVLGEAAGLPLTKDVDTWFA"
     gene            3041..>3309
                     /locus_tag="VF991_23555"
     CDS             3041..>3309
                     /locus_tag="VF991_23555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9559489.1"
                     /translation="MDDFQVDVLVVGAGNAAACAALAAREKGASVAMLEAAPEAERGG
                     NSTYTAGAMRVVFHGVDDLVQLYDLTPDEKRDVDFGSYSADQYLD"
BASE COUNT          596 a         1093 c         1056 g          564 t
ORIGIN      
        1 gatccagtca taccctcctc gccgctgatt gccgattcgg cgaaaacccg cacaggtccg
       61 cgcctgcttg gtgtcactga acgtcgagta gtccgcctcg tgaaaacggg cgacggggga
      121 aaatccgctg gcggactgcc cgttcacata catccacttg agaaaatcag ccgtcgtctc
      181 gtccgtggtg aggtaagaga aggagttctg ggcttcccaa aggaagatgt ggatgtagcc
      241 ttcacttgtc gttccctcga ccgaccatcg acggaaggcg cccacatttc cttcggtcgt
      301 gacgacgttc gtggtcttgc atctcaatcc cggccagaaa gcgatgcgcg actgtctgca
      361 gtcgatgtcc gaccaattat aggtcgtctg tgtcggcgcc gcgcccgccc aggccaagga
      421 cagtgtcaag cacgacaaga aaaacacgag ccttatgacc gccctcattt cggcctccag
      481 accagtgcga ctcgacgaac ttgcaacgag ggccggcaga gaaagttccg gctggcggca
      541 acacctatcc gcgtgccgcc aagatcttgc cgccctgctc gacagggcgg gcgtcgatca
      601 ggacaaaggc caccacacaa ggcgcgttcg agcgattgac ccagttatgg atggtgccgc
      661 gttgcacgag cacgtcgccg gcgcgcaggg tgacgacctg atcgtcgagc tccatgtcga
      721 tctcacccga cagcaccacc gcatagtcga tggaattcgt gcggtgattg cgcggcgtca
      781 cgccaggcgc gtattcgatg acccggaaga cggtgccgtc gtcgcgcgtc gtggcggtga
      841 tctccttggc gccgtccgcc gtgccggcat tgtcgaccgg aaatcccgcc gtcgaccaga
      901 tgttcgcgat gatggctccg gggcggtagg agacgacgtc gcgcgagatc tcatcgatcg
      961 ccacggtggc cttgccgctg ccgtcatgtc ccgtgaccac ccgccgtatc ttcatatcga
     1021 cctacctcgg ccccaacagt cccgcggact tgagagcggt gatttggccg gcatcatagc
     1081 cgatctccgc cagcacctcg tcgttgtgct ggccgatttc cggcgggtcc atggtgagcg
     1141 gtggacgcca gcccagcatc tggaacggca gcagcggcag gcgcgtcttc accccgcccg
     1201 gcaacgtcgt cggcgccagc gacccgttgg ccagaagatg cggatcgtcg aacaagtcct
     1261 gcggccgcgc caccggggcg aaggagatgt cggcctccag gcacagtccc tccagcgtct
     1321 ccttgtcgta gcgcttgaag acctcggcga ctttcggcac cagccagggc cgcgcctcga
     1381 tgcggagatt gttggtcgcg agcttcggat cggcggcgag ctccggctgc ttgaagaatt
     1441 cgcagaagcg cttccactgg ccgtcgctgg tgatgccgat gaagacctgt tggcggtcgg
     1501 cggtcgtgaa gatctcgtag atcgcccatg agcttacccg ttcgggcatg ggcggcggcg
     1561 gcgcgctgtt catggcggtg atggccagat gctggcccat caggaacacg acggattcga
     1621 acaacgcgct ttcgaccagc ccgcccttgc cggtgcgctc gcgcatcttg agcgccaaga
     1681 ccgtgccgaa ggcgccaaac atgccgccga cgatatcgac caccgaggta ccggcgcgca
     1741 agggccggcc ggtcgggccg gtcatgtagg ccagtccacc catcatctgc acgacctcgt
     1801 cgagcgccgg ccgcttctcg tagggccccg gcaaaaagcc cttgagtgca caatagacca
     1861 gccgcgggtt gatcttctcc agatgcacgg cccccagccc gcgcttgctc atcgagcccg
     1921 gggcaaaatt ttcgatcatc acgtcggccg actgcaggag ctttatcagc accgcgcggc
     1981 cctcgggcgc atcggcgtcg agcgccaggc tcttcttgtt gcggttgaag tagccgaaaa
     2041 agccgccgcc gaagccgcgc agcttgcgcg tgcgatcgcc gtccaccggc tcgaccttga
     2101 tcacctcggc gcccaagtcg gccaggatca tgccgcacga cggcccgagg atggtatggc
     2161 tgagttcgac gacgcggatg cccttgaggg gcggttcgac actcattgtg acgtgtcact
     2221 ttctgtcgtc ctgagcgcag cgaaggacct catcgaagag tcaaacgggc gacagccatc
     2281 gcatggaacg ggcatgagat ccttcgcttc gctcaggatg acagaaagaa gcttagtcgg
     2341 cgcagtggcg aacgcctacg cgaaccacgt atcgacgtcc ttggtgagcg gcaggccagc
     2401 ggcctcgccc agcacgcggt gggccatgcc ggcgccgacc aaaaacgcct cctggtgggg
     2461 cagcgcgttg gccttgagca tgcggcggat ggcgcgaccg tcatggcccc agccgatcgc
     2521 ttcgaccttg ccgtcgaaag cccggttgag gacggccagg aaatccgcgc gctcggcgtc
     2581 cgacagcccc ggcacggcgt cgatgtcgcc cagcacgaac agccggccgc ggaatttggc
     2641 taaaagggcc gcgacggagt tgcgcggctc gacgatcacc tcccggccgg gcccgcggcg
     2701 cacgcgggcg gccagcgaca gcggcaggac ggcggcgccg agatgggccc ccgaatccat
     2761 gatcaccgag gccagttcct tgtaggtgat gcccagccgc tcggcacgct tcagccgcat
     2821 catggccact tcgggcttgg gcgtcttcca ggccttggcg gcggcgcggc gccacaccca
     2881 ggcctcccac gacatgtcga aggtcgggcc gttattgtgg ccgatgcccg gcctgcgcag
     2941 cagggcctcg acattggcat gccggacccc tagacggtcg aaacgatcac ccataacggt
     3001 attctaacgc aactttgatg ccgaaatcga ggagtggagc gtggacgatt tccaggtcga
     3061 tgttttagtg gtcggtgccg gcaacgcggc ggcctgcgcc gccctggcgg cgcgcgaaaa
     3121 gggcgcctcg gtcgccatgc tggaggccgc tcccgaggcc gagcgcggcg gcaacagcac
     3181 ctatacggcc ggcgccatgc gcgtggtgtt ccacggcgtc gacgacctgg tgcagctcta
     3241 cgacctcacc cccgacgaaa agcgcgacgt cgatttcggc agctactcgg ccgaccagta
     3301 tctcgacga
//
LOCUS       DASWGA010001031         3958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_490898, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001031 DASWGA010000000
VERSION     DASWGA010001031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3958
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490898"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VF991_23560"
     CDS             <1..286
                     /locus_tag="VF991_23560"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9559490.1"
                     /translation="AATKLHACRLMVMDAAVKQDEGRDVRMEASMIKVFATEMATEVI
                     DHAQQAFGAMGVTQELPLSWLAQKVRTMRVYEGPSEVHRMVIARRILGGR"
     gene            355..903
                     /locus_tag="VF991_23565"
     CDS             355..903
                     /locus_tag="VF991_23565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559491.1"
                     /translation="MTYTLDAFIKDAKSALKTTDGPAGREKVRVLLEKLLTNQSFVDE
                     AVGLAAPIGTRKLYEDKDQGFVVLAHCNPKPHKSPPHDHGSSWAVYGQAIKYTDMSEY
                     KRLDGGNGAGEAKLEKVKSYRLEPGHAGTYDVGAIHAIDYPEGSRFVRVTGRDLDYVQ
                     RLKFDTAAGKAITIESATAGAA"
     gene            984..1826
                     /locus_tag="VF991_23570"
     CDS             984..1826
                     /locus_tag="VF991_23570"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9559492.1"
                     /translation="MSTRATRYIHHGKFYVEGWLRTEAALAIAALSERQHALGVEGST
                     AEIGVHHGKLFILLYLLSRAPERVVAIDLFEDQHLNVDQSGSGEFVTFRRNLERHADS
                     ARLVLHQGSSLDLAAADLMRLAGGRLRLISVDGGHTAEITAHDLAVADGSLAEGGIIV
                     VDDVFNEQWPGVADGVHRHFSRRPSLVPFAIGANKTYFCRPSHRDVYRAAAAAAASST
                     TMPEFLGEPVVVLHFARPRFKDRIAGSAVWRRLRSTPVGLPLRWAWRTGRTVRRGLTR
                     REDF"
     gene            complement(1823..3283)
                     /locus_tag="VF991_23575"
     CDS             complement(1823..3283)
                     /locus_tag="VF991_23575"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEX9559493.1"
                     /translation="MPALFACLRAFCCLAVGGLAMLVGSVASAQQGPGIFAYRWMRAP
                     PAEEITPADVREALMWTGHLEAVFKGEIAVAARKAWQVWQKSKGHAPTEVLPQDQMVE
                     LVSQALKERDDVGWSILHDNAVGFAIGVPTKLVTFGTPRTEGGGLWYYGNGTISQSVG
                     VHLGYPSCRSMDAVYANLAAATYRVRQIDGILAFVRHGERSSYLRWKCYSSGSIWAEI
                     TAPVETLEAHRGLFAAMASSLIILRSPDPTVRPRPKIEDLPLAPSGFSDEEAARPQPQ
                     AKAKQAAPSAINDSGKTEALKLEVRDGPDLRAEEIFDKAAGAVYKVKADRRLGSAVAI
                     SDNELLTNCHVVTDLAEVKIVREKQELTAKVVSRNADADRCVLRTAAKLPKWVTVRPY
                     DDIKVGERAITIGTPQGLELTVAEGIVSSKRTYNQSRVIQTSAPISQGSSGGGLFDAR
                     GHLLGITTFYVKAGQNLNFAVAAEEFAQEREEPATR"
     gene            complement(3365..3673)
                     /locus_tag="VF991_23580"
     CDS             complement(3365..3673)
                     /locus_tag="VF991_23580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1272 domain-containing protein"
                     /protein_id="HEX9559494.1"
                     /translation="MLELRPSCEHCNKALPPASLEARICSYECTFCAACVHEVLGNVC
                     PNCGGGFTARPIRPSRNWRSDNFLGKDPAATRVKHRPVDPALHRVLAAKIGSLPPEQR
                     "
     gene            complement(3673..>3958)
                     /locus_tag="VF991_23585"
     CDS             complement(3673..>3958)
                     /locus_tag="VF991_23585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003614567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEX9559495.1"
                     /translation="AIPVAERVVRDRNRISGGGVTAGIDFGLTVAAELAGEEVAKSIQ
                     LVLEYDPQPPFDSGSPEKAGAERVKRIRERLAPLLQSRRRANAEAAARMH"
BASE COUNT          645 a         1312 c         1336 g          665 t
ORIGIN      
        1 tgcggcgacc aagctgcatg cctgccggtt gatggtgatg gacgccgcgg tcaagcagga
       61 cgagggccgc gacgtgcgca tggaggcgtc gatgatcaag gtcttcgcca ccgagatggc
      121 gaccgaggtg atcgaccatg cccagcaggc gttcggcgcc atgggcgtca cgcaggagct
      181 gccgctgtcc tggctggcac agaaggtccg caccatgcgg gtctacgaag gcccgtcgga
      241 agtgcaccgc atggtcatcg cacggcgcat actcggcggg cgttgacagt cggcggcggg
      301 tcggcggatc atttccgccc gcacagatct acgcccgtac agccggagtg cctcatgacc
      361 tacacgctcg acgctttcat caaggatgcc aagtcggcgc tcaagaccac ggacggcccg
      421 gccggccgcg agaaggtgcg cgtcctgctg gagaaacttt tgaccaacca gagcttcgtc
      481 gacgaggcgg tgggtctggc cgcgccgatc ggcacgcgca agctctatga ggacaaggat
      541 cagggcttcg tcgtgctggc gcactgcaat cccaagccgc acaaaagccc gccgcacgat
      601 cacggcagct cgtgggcggt ctacggccag gccatcaagt acaccgacat gagcgagtac
      661 aagcgactgg acggcggcaa tggcgcgggc gaggccaagc tcgagaaggt caagagctac
      721 cggctggagc cgggtcacgc cggcacctac gatgtcggcg ccatccatgc catcgactat
      781 cccgagggca gccggttcgt ccgcgtcacc ggccgcgacc tcgactacgt gcagcggctg
      841 aagttcgaca ccgccgccgg caaggcgatc accatcgaga gcgcgaccgc cggcgcggca
      901 taggtctcgt atccatcgtc caatcacagg acggtcatca ccgggtgatt gaccggtcgc
      961 gcggctgtgc gaacttctct ccaatgagta cccgcgctac gcgttatatc catcacggca
     1021 agttttacgt cgagggctgg cttcgcacgg aagcagccct cgccatcgcc gccctcagcg
     1081 agcgccagca cgcgcttggc gtcgaaggca gcaccgccga gatcggcgtg catcatggca
     1141 aactcttcat cctgctctat ctgctgagcc gtgcgccgga gagggtggtc gccatcgacc
     1201 tgttcgagga ccagcacctc aatgtcgacc agtcgggcag cggcgagttc gtgacgttcc
     1261 ggcgcaacct ggagcgccat gccgacagcg cgcgcctggt gctgcaccaa ggcagctcac
     1321 tggatcttgc cgccgctgac ctgatgcggc tggcgggagg acggctccgc ttgatcagcg
     1381 tcgacggcgg ccacaccgcc gagatcactg cgcacgacct cgccgtggct gacgggagcc
     1441 tggcggaggg cggcatcatc gtggtcgacg acgtgttcaa cgagcaatgg cccggcgttg
     1501 ccgacggcgt gcaccgccat ttcagccgcc ggccgagcct ggtgcccttc gcgatcggcg
     1561 ccaacaagac ctatttctgc cggccctcgc accgcgatgt ttatcgcgcc gccgccgcgg
     1621 cggccgcctc gagcaccacg atgccggaat tcctgggcga gcccgtggtg gtcctgcatt
     1681 ttgcccgtcc gcggttcaag gaccggattg caggctctgc ggtgtggcgg cgcctgcgtt
     1741 caacgccggt cggcctgccg ctgcgctggg cctggcgtac cggccgcacg gtgcggcgcg
     1801 gcctgacgcg gcgcgaggat ttttagcgcg tcgccggctc ctcgcgctcc tgggcgaatt
     1861 cctcggcggc gacggcgaag ttcagattct ggcctgcttt gacatagaag gtcgtgatgc
     1921 cgagcagatg accgcgcgcg tcgaacaggc cgccgccgga cgagccctgc gaaatcggcg
     1981 ccgaggtctg gatcacccgg gattggttgt aggtgcgctt ggaggagacg atgccctcgg
     2041 ccaccgtcag ctcgagccct tgcggcgtgc cgatggtgat cgcccgctcg ccgaccttga
     2101 tatcgtcgta ggggcgcacg gtgacccatt tcggcagctt ggcggcggtg cgcagcacgc
     2161 agcggtcggc atcggcgttg cgcgacacga ccttggctgt gagttcctgc ttttcgcgca
     2221 cgatcttgac ctcggccaaa tcggtgacga cgtggcaatt ggtcaaaagt tcgttgtcgc
     2281 tgatcgccac ggccgagcct aagcggcggt ctgccttgac cttgtagacg gcccccgccg
     2341 ccttatcgaa gatctcctcg gcgcgaagat cgggcccgtc gcgcacttcg agcttcagcg
     2401 cctcggtctt gcccgagtcg ttgatcgccg acggcgcggc ctgcttggcc ttggcctggg
     2461 gctgcgggcg ggcggcctcc tcgtccgaga agcccgaggg tgcgagcggc agatcctcga
     2521 tcttgggtcg cggccggacg gtcgggtcgg gactgcgcag tatgatgagg ctgctggcca
     2581 tggcggcgaa caggccgcga tgggcctcaa gcgtctcgac cggcgcggtt atctccgccc
     2641 agatcgaacc cgagctgtag catttccacc tgagatagct gctgcgctcg ccatggcgca
     2701 cgaaggcgag gattccatcg atctgccgga cgcgataggt cgctgcggca aggttcgcat
     2761 agacggcatc catgctcctg cagctcggat agccgagatg gacgccgacc gattggctga
     2821 tcgtgccgtt gccgtaatac cagaggccgc cgccttcggt gcgcggcgtc ccgaacgtca
     2881 cgagcttggt ggggacgccg atggcgaagc cgacggcgtt gtcgtgcagt atcgaccagc
     2941 ccacgtcgtc gcgttccttc agggcctgcg aaaccagttc gaccatctgg tcctggggca
     3001 gaacctcggt gggcgcatgg cccttcgatt tctgccagac ctgccaggcc ttgcgcgccg
     3061 cgacggcgat ctcgcccttg aaaaccgcct cgagatggcc ggtccacatc agggcctccc
     3121 ggacatcggc cggcgtgatc tcctccgccg ggggggcgcg catccatctg taggcgaaga
     3181 tgccggggcc ctgctgggcg gaggccacgc tgccgaccaa catcgccaag ccgcccaccg
     3241 ccaggcaaca aaacgcgcga agacaggcaa acagggcagg cacgccgcga tcctcccgcg
     3301 ccatcctggg cgattcatgg cagccggccc accgctcgat tgtatcaaaa gcgtacggcg
     3361 ggcctcatcg ctgctcgggc ggcaggctgc cgatcttggc ggcgagcacg cggtgaagtg
     3421 ctggatcgac cgggcgatgc ttgacccggg ttgcggccgg atccttgcca aggaagttat
     3481 cgctccgcca gttgcgtgac gggcgaatcg gacgggctgt gaagccgccg ccgcagttgg
     3541 gacagacgtt gcccaacacc tcatgaacac acgcggcgca gaacgtgcac tcgtagctgc
     3601 agatacgggc ttccagcgag gccggcggca gcgccttgtt gcagtgctcg cagcttggtc
     3661 gcagttcgag catcaatgca ttcgtgccgc cgcttcggcg ttcgcccggc gacggctttg
     3721 cagcagcggc gcgagtcgct cgcggatgcg cttgacgcgc tcggcgccgg ccttctcggg
     3781 gctgcccgaa tcgaagggcg gctgcggatc gtattccagt acgagctgga ttgacttggc
     3841 cacttcctcg ccggccagtt cggccgcgac ggtcagaccg aaatcgatgc cggccgtcac
     3901 gccgccgccc gagatgcggt tgcggtcgcg caccacccgt tcggcgacgg ggatggcg
//
LOCUS       DASWGA010001032         2967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1011329, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001032 DASWGA010000000
VERSION     DASWGA010001032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1011329"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VF991_23590"
     CDS             <1..297
                     /locus_tag="VF991_23590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559496.1"
                     /translation="IIGDFNIVGPVVLPGFADVGPREPTHFASNVVPFRLDRCLVHGL
                     ACRTADALAFGPSDHRPIRLELNIAEGWGLGTGGLRARPEHHPPRRDRLRRLYR"
     gene            complement(419..1837)
                     /locus_tag="VF991_23595"
     CDS             complement(419..1837)
                     /locus_tag="VF991_23595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007566808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEX9559497.1"
                     /translation="MTLNAELAWVLGESAAVMHVAIASAVTVHVLLYKRNVGAAVSWI
                     GMAWLSPFLGGLLYATMGVNRVKRRAQRLRRQRLPLVPGEEGVARSAADDPLSPLEFA
                     VGRLTGLPCEPGNTIEMLRSGDQAYPRMLEAIDAAQKSVGLQSYIFRADKAGEAFHQA
                     LIQAQRRGVEVRVLIDGVGGGYFWSGTYNHLRGAGVPVARFLHSYFPWRMPFVNLRNH
                     RKVLVIDGRLAFTGGLNIGAENIRADDPPHIVLDSHFQLEGPIVDQLTDAFADDWLFA
                     TGEKLLTENWFPPLAKVGQVTARVVTSGPDEDMEQIEFVALHAISCARKSIRIITPYF
                     LPPDPLTMSLGLAALRGVTVDIVLPEHSNHTILDWARRVPLRPLIEAGCRVWLMPAPF
                     DHSKLMVVDDAWALIGSANWDTRSFRLNFELNVELHDRDFAGKLAAVAPTTRRLALAE
                     LDGDSLPVRLRNSAARLLQPYL"
     gene            complement(1860..>2967)
                     /locus_tag="VF991_23600"
     CDS             complement(1860..>2967)
                     /locus_tag="VF991_23600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX9559498.1"
                     /translation="RQLDEMDYAPSFQMGHPKAFELAARHAALLPGDLNHAFYCNSGS
                     EAVDSALKIALAYHRARGEGTRTRFVGRERGYHGVGFGGISVGGMVNNRKWFGALLPG
                     VDHLPHTHLAKNAFSKGQPAHGAELADELERIVGLHDASNIAAVIVEPCAGSTGYLPP
                     PKGYLERLRQICDKHGILLIFDEVITGFGRLGTAFAADKFGVIPDLMTVAKGISNATV
                     PMGGVFVRKPVFDGLMNGPENAIDLFHGYTYSAHPLACAAASAVLDIYRDENLFKRSA
                     ELSPYWEDGVHSLKGLPNVTDIRNLGLAAGIDLAPKGAVGTRGYEAFTKAFELGLMVR
                     QSGDAIAMSPPLVIEKAQIDEIIDITAKTIKAVA"
BASE COUNT          489 a          965 c         1046 g          467 t
ORIGIN      
        1 atcatcggcg acttcaacat cgtgggcccg gtggtgctgc cgggcttcgc cgacgtcggc
       61 ccgcgcgagc cgacgcactt tgccagcaac gtcgtgccgt tccggctcga ccgctgcctg
      121 gtgcacggtc tggcctgccg caccgccgac gcgctcgcct tcgggccgtc cgaccatcgg
      181 ccgatccggc tggaactcaa tatcgccgaa ggctgggggt tgggcacggg cggattgcgg
      241 gcgcggcccg agcatcaccc gccgcgccgc gaccgtttgc gtcggcttta tcgatgaggg
      301 aagccgctgt catcgctcat ggtcttccgg accgcgcgca tcctgcgcgc tcatgatcat
      361 gagcgagcca gaggctcgcg gtccggaaga gcatgattcc atgcatacgg aacagccttt
      421 agagataagg ctgcagcagg cgcgcggcgc tgttgcgcag ccggaccggc agcgaatcgc
      481 cgtcgagctc ggcaagtgcc aggcgccgag tggtcggtgc gacggcggca agcttgccgg
      541 cgaagtcgcg atcgtgcagc tcgacgttga gctcgaaatt cagccggaag ctgcgggtgt
      601 cccagttggc gctgccgatc agcgcccacg catcgtcgac gaccatcagc ttggaatggt
      661 cgaacggcgc cggcatcagc cagacgcggc aaccggcctc gatcagcggc cgcagcggca
      721 cgcggcgcgc ccaatcgagg atggtgtggt tggaatgctc gggcaggacg atgtcgaccg
      781 tcaccccgcg cagggcggcg aggccgagcg acatggtcag cggatcgggc ggcaggaagt
      841 agggcgtgat gatgcggatc gacttgcgcg cgcaggagat cgcgtgcagc gccacgaact
      901 cgatctgctc catgtcctcg tccggaccgg aggtgacgac gcgcgcggtc acctgcccca
      961 ccttggcgag cggcgggaac cagttctcgg tcagcagctt ctcgccggtg gcgaacagcc
     1021 aatcgtcggc aaaggcgtcg gtcagctgat cgacgatcgg cccctcgagc tggaaatggc
     1081 tgtcgagcac gatgtgcggc ggatcgtcgg cgcggatgtt ttcggcaccg atgttcagcc
     1141 cgccggtgaa agcgagcctg ccgtcgatca ccagcacctt gcggtggttg cgcaggttca
     1201 cgaacggcat gcgccacggg aaatacgaat gcaggaagcg ggcgacgggc acgccggcgc
     1261 cgcgcaggtg attgtaggtg cccgaccaga aatagccgcc gccgacgccg tcgatcagca
     1321 cccgaacttc cacgccacgg cgctgcgcct ggatcaatgc ctgatggaag gcctcgcccg
     1381 ccttgtcggc gcggaagatg tagctctgca ggccgacgct cttttgcgcc gcgtcgatcg
     1441 cctccagcat gcgcggatag gcctggtcgc cgctgcgcag catctcgatc gtgttgccgg
     1501 gctcgcacgg cagcccggtc agccggccga ccgcgaattc cagcggcgac agcggatcgt
     1561 cggcggccga ccgggcaacg ccttcctcgc cggggacgag cggcaggcgc tggcggcgca
     1621 ggcgctgggc gcggcgcttg acgcggttga cgcccatggt cgcgtacaag agcccgccca
     1681 ggaacggcga cagccaagcc atgccgatcc atgagacggc ggcgccgaca ttgcgcttgt
     1741 agagaaggac atggacggtc acggcgctgg cgatggcgac atgcatcacc gccgcggatt
     1801 cacccagcac ccatgccagc tcggcgttca gggtcacctg cccaatgtat caggccccgt
     1861 caggcgaccg ccttgatcgt cttggccgtg atgtcgatga tctcgtcgat ctgcgccttc
     1921 tcgatcacca gcggcggcga catggcgatg gcgtcgcccg actggcgcac catgaggccg
     1981 agctcgaagg ccttggtgaa tgcctcgtag ccgcgcgtgc cgaccgcgcc cttgggcgcg
     2041 aggtcgatgc cggcggcgag accgagattg cggatgtcgg tgacattggg caggcctttc
     2101 aacgagtgca cgccgtcctc ccaatagggc gacagctcgg ccgagcgctt gaacaggttc
     2161 tcgtcgcgat agatgtcgag cacggccgac gccgccgcgc aggccagcgg atgcgccgag
     2221 taggtgtagc cgtgaaacag gtcgatggcg ttctccggtc cattcatcag gccgtcgaac
     2281 acgggcttgc gcacgaacac gccgcccatc ggcaccgtgg cgttgctgat gcccttggcc
     2341 accgtcatga ggtcgggaat gacgccgaac ttgtcggcgg cgaacgccgt gccgagacgg
     2401 ccgaagccgg tgatgacctc gtcgaagatc agcaggatgc cgtgcttgtc gcagatctgg
     2461 cgcagccgtt cgaggtaacc cttgggcggc ggcaggtaac cggtcgagcc ggcgcacggc
     2521 tcgacgatga ccgcggcgat gttggaggcg tcgtgcaggc cgacgatccg ctccagctcg
     2581 tcggccagct ccgcgccatg cgcgggctgg cctttcgaga aggcattctt cgccagatgg
     2641 gtgtgcggca gatggtcgac gcccggcagc agggcgccga accatttgcg attgttgacc
     2701 atgccgccga ccgagatgcc gccgaagccg acgccatgat agccgcgctc gcggccgacg
     2761 aagcgggtgc gcgtgccctc gccgcgggcg cggtgatagg cgagcgcgat cttgagcgct
     2821 gagtcgacgg cctccgagcc ggagttgcag tagaaggcgt ggttgagatc gcccgggagc
     2881 agggcggcgt ggcgcgccgc cagctcgaac gccttgggat ggcccatctg gaacgacggt
     2941 gcgtagtcca tctcgtcgag ctgcctg
//
LOCUS       DASWGA010001033         2494 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2268631, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001033 DASWGA010000000
VERSION     DASWGA010001033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2494
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2268631"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..989)
                     /locus_tag="VF991_23605"
     CDS             complement(<1..989)
                     /locus_tag="VF991_23605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CmpA/NrtA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX9559499.1"
                     /translation="MFQDPFDAKSLLARRCPCGGAHAAADHDRLTAEAVPRAEEERWN
                     RVVDAAVLRAVFPVDAQRRLFLKTVGAATAMAALSSVLPLGAAREAFAQGGMPEKKDL
                     KVGFIPITCATPIIMAHPMGFYAKQGLNVEVVKTAGWAVIRDKSLAGEYDAAHMLSPM
                     PLAISLGVGSNPVPWAMPAIENINGQAITLAIKHKDKRDPKDWKGFRFAVPFDYSMHN
                     YLLRYYVAEHGLDPDKDISIRSVPPPEMVANLRADNIDGYLGPDPFNQRAVYDGIGFI
                     HLLTKELWDGHPCCAFTVGKEFASHNPNAYRALLKAIIDATTFASKADNRKEIA"
     gene            1326..1835
                     /locus_tag="VF991_23610"
     CDS             1326..1835
                     /locus_tag="VF991_23610"
                     /inference="COORDINATES: protein motif:HMM:NF022182.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HEX9559500.1"
                     /translation="MALSRQERTKRKADLNPLELIEKVVSGHDWPFDRTSDREIAVEV
                     AGRWCDYRMFFSWREDVEALHFTCAYDVRIPTERHNDIHILLALINEKMWLGHFDLWT
                     DEGLPMFRHAIPLRGTSGLMPEQLNDLVEVAISESERFYPAFQYVVWAGKSPTDALTV
                     SILETVGEA"
     gene            1998..>2494
                     /gene="lgt"
                     /locus_tag="VF991_23615"
     CDS             1998..>2494
                     /gene="lgt"
                     /locus_tag="VF991_23615"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEX9559501.1"
                     /translation="MNALLIPYPEIDPVLIELGPFAIRWYALAYIAGLVIGWQIMRRV
                     CEQPPKLLSPVKIDDFLLWAALGVILGGRLGYVLFYKPLFYAAHPLAILTLWEGGMSF
                     HGGLLGVVAAILLFAWRNKVDPLMLADLVAIVTPIGLFFGRLANFITGELWGRASDVP
                     WAMIFP"
BASE COUNT          416 a          805 c          785 g          488 t
ORIGIN      
        1 gcgatctcct tgcggttgtc cgccttggac gcgaacgtcg tggcgtcgat gatcgccttc
       61 aggagcgcgc gataggcgtt gggattgtgg ctggcgaatt ccttgccgac ggtgaaggca
      121 cagcacggat ggccgtccca cagttccttg gtcaggaggt ggatgaagcc gatgccgtca
      181 tagaccgccc gctggttgaa cgggtcggga ccgagatagc cgtcgatgtt gtcggcgcgc
      241 agattggcca ccatctcggg cggcggcacc gagcggatgg agatgtcctt gtcgggatcg
      301 agcccgtgct cggccacgta gtagcgcagc aggtagttgt gcatcgagta gtcgaacggc
      361 acggcaaaac ggaagccctt ccagtccttg ggatcgcgct tgtccttgtg cttgatggcc
      421 aaggtgatcg cctggccgtt gatgttctcg atcgccggca tggcccacgg caccgggttc
      481 gagccgacgc ccagcgagat ggcgagcggc atgggcgaga gcatgtgcgc ggcgtcgtat
      541 tcgccggcca gcgacttgtc gcggatgacc gcccagcccg ccgtcttgac cacttcgacg
      601 ttgaggccct gcttggcata aaagcccatc ggatgggcca tgatgatggg ggtggcgcag
      661 gtgatgggga tgaagccgac cttgaggtcc ttcttctccg gcatgccgcc ctgggcgaag
      721 gcctcgcgcg ccgcgccgag cggcagcacc gaagagaggg cggccatcgc cgtcgccgcg
      781 ccgaccgtct tgaggaacag ccggcgctgg gcatcgacgg gaaagaccgc ccgcaggacc
      841 gcggcatcga ccacccggtt ccagcgctct tcctcggccc tcgggaccgc ctcagccgtg
      901 aggcgatcgt gatcggccgc ggcatgggcg ccgccgcacg gacaacgccg cgcgagcagg
      961 cttttggcgt cgaacggatc ctggaacatc gagctttgcc tccccgcgtt ttcacgctct
     1021 tggaagccat tgcaggcaag ctgcatgcca aggcctgtgg acccgccgac ttgcccacaa
     1081 tcgggcaatt caagctgatt cggcctgcgg aatttccgcg attcgaatct gagcgctggg
     1141 gattaaattg atggaatcgc tgactctttc cccattttcg accggatttc ttattgcacc
     1201 ccgactcgcc cctgtggcag tctattgctt gtgggttgtt gggtgcccac cacgatatat
     1261 cggccacccg cctcaagaat ggtccatcag gcaccgcaag gcggaaatgg ttggggagtg
     1321 ggtcgatggc gttatcgcga caggaacgga ccaagcggaa agccgatctc aacccgctcg
     1381 aactgatcga gaaagtcgtt tccggccatg actggccgtt cgatcgcacc tctgaccgcg
     1441 aaatcgccgt cgaggttgcc ggccgctggt gcgactaccg catgttcttc agctggcgcg
     1501 aggacgtcga ggccctgcat ttcacctgcg cctacgacgt ccgcattccc accgagcgcc
     1561 acaacgacat ccacatcctg ctggcgctga tcaacgagaa gatgtggctc ggccacttcg
     1621 acctgtggac cgacgaaggc ctgccgatgt tccgccacgc catcccgttg cgcggcacct
     1681 cgggcctgat gcccgagcag ctgaacgacc tcgtcgaagt ggcgatcagc gaaagcgagc
     1741 gcttctatcc cgcctttcag tacgtcgtgt gggccggcaa gtcgcccacc gacgcgctca
     1801 ccgtctccat tctcgagacg gtcggtgaag cgtgatcggc aaaaggcccg attcgataaa
     1861 ggacgtccga cgccccctct cgtaagaacc atgtcttaaa tctctgtcgt tcggattgtc
     1921 ctgagcggcg ccggtcctaa aagaccggcg ccgcgaccat tctgcggtca gccttgaccg
     1981 gctataacct cgccgcaatg aacgccctcc tgatccccta ccccgaaatc gacccggtgc
     2041 tgatcgagct cgggccattc gccatccgct ggtatgcgct ggcctacatc gccggcctgg
     2101 tcatcggctg gcagatcatg cggcgcgtct gcgagcagcc gcccaagctc ctgtcgccgg
     2161 tcaagatcga cgatttcctg ctgtgggcgg cgctgggcgt catcctcggc ggccggctgg
     2221 gctacgtgct gttctacaag ccgctgttct acgccgccca tccgctggcc atcctgaccc
     2281 tgtgggaagg cggcatgtcg ttccatggcg ggcttttggg cgtcgtcgcc gccatcctgc
     2341 tgttcgcttg gcgcaacaag gtcgatcccc tgatgctggc cgatctcgtg gccatcgtga
     2401 cgccgatcgg cctgttcttc ggccgcctgg ccaatttcat caccggcgag ctgtggggcc
     2461 gtgccagcga cgtgccgtgg gccatgatct ttcc
//
LOCUS       DASWGA010001034         3219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1138329, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001034 DASWGA010000000
VERSION     DASWGA010001034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3219
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138329"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..1740
                     /locus_tag="VF991_23620"
     CDS             124..1740
                     /locus_tag="VF991_23620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX9559502.1"
                     /translation="MPILESQVDTNSDDYKRNRDKMLAAIAEFRDAEASVQATSEKSR
                     ERFAKRKQLMPRERIALLLDRGAPFLELMPLAGYRMHDDKDGSSAGGGSVAGIGYVEG
                     VRCVVSASNSAIKGGTVAPSGQRKGQRVQQIVLENKLPLVHLVESGGANLLYQAEIFV
                     PGGRGFANQARMSARGIPQVTVVHGSSTAGGAYLPGLSDYVIMVRNQSKVFLAGPPLL
                     KAATGEIATDEELGGAEMHATVSGVAEWMAENDSDGIRMAREVIAKWHWNDKLPPRRQ
                     RPFKEPIHDIDELCGVVPPSYTDPYDVREVIARLVDGSDFLEFKGLYDQQTICGWAEI
                     EGEPVAFIGNNGPITTKGSVKAAQFIQLCCQQGTPIVYLQNTTGYMVGTEAERGGIVK
                     HGSKMIQAVANATVPQITVVIGGSFGAGNYGMCGRAYDPRFIFAWPNSRTAVMGGEQA
                     AGVMKTVTEQKFLREGKEPPKEQIDKMYKGIVDQFDRESTALYGTAHLWDDGIIDPRD
                     TRRILAFTLSIARESLVRPLNPITFGVARM"
     gene            1743..2903
                     /locus_tag="VF991_23625"
     CDS             1743..2903
                     /locus_tag="VF991_23625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9559503.1"
                     /translation="MKFTPEHEALRQTWKTLIDREINPNVDEWEKEGAFPAHELFKKM
                     GDAGLLGVDKPVQFGGSGLDFSYAMICAESLGLVNGGSIPMATGVQISMATPALARYG
                     SDELRQEFLAPSISGDYVACLGVSETGAGSDVASIKTNARRVGGDWVINGGKMWTTNG
                     AQADWMCLLANTGDGAVHKNKSLIVVPMKATGVQIVKKLDKLGMRASDTVQTFFDEVK
                     VPVRYTIGQPGAGFIYQMQQFQEERLWAGAGTLMGCDRIINATIEYTRERMVFGRPLL
                     DNQVIHFRLAELKSEVEALRSLVYRACEDYLAGTDVTMLASMAKLKAGRLRREVSDAC
                     LQYWGGAGYLWDNPVARSYRDGRLGSIGGGADEVMLQIISKLMGTLPRLGNR"
BASE COUNT          597 a         1069 c         1057 g          496 t
ORIGIN      
        1 cgcatcgacg gcggcgtgcc gctcggcaac cgctcgatcg acctgcccaa ggcggaccgc
       61 caaagcccat tcaacggctt ccacctcgcc aagacgccca aagtgctggg cggctgaacg
      121 accatgccga tcctcgaaag ccaggtcgat accaacagcg acgactacaa gcgcaatcgc
      181 gacaagatgc ttgccgcgat cgccgagttc cgcgatgccg aagcgagcgt gcaggcgacg
      241 tccgagaagt cgcgtgagcg cttcgccaaa cgcaagcaac tcatgccgcg cgaacgcatc
      301 gcgctcctgc tcgaccgcgg cgcgcccttc ctcgagctga tgccgctcgc cggctaccgc
      361 atgcacgacg acaaggacgg gtcgagcgcc ggcggcggct cggtcgccgg catcggctat
      421 gtcgagggcg tgcgctgcgt ggtgtcggcg tcgaacagcg ccatcaaggg cggcacggtg
      481 gcgccatcgg gccagcgcaa gggccagcgc gtgcagcaga tcgtgctgga gaacaagctg
      541 cccctggtgc acctggtcga atcgggcggt gccaaccttt tataccaggc cgagatcttc
      601 gtgccgggcg gccgcggctt cgccaaccag gcgcgcatgt cggcgcgcgg cattccgcag
      661 gtcaccgtcg tgcacggctc ctcgaccgcg ggcggcgcct acctgcccgg cctctccgac
      721 tacgtgatca tggtgcgcaa tcagtcgaag gtgttcttgg ccggcccgcc gctcctcaag
      781 gcggcgaccg gcgagatcgc caccgacgag gagttgggcg gcgcggagat gcacgccacc
      841 gtgtcgggcg tcgccgaatg gatggccgag aacgactcag acggcatccg catggcgcgc
      901 gaggtgatcg ccaagtggca ctggaacgac aagctgccgc cgcgcaggca aaggccgttc
      961 aaggagccga tccacgacat cgatgagctg tgcggcgtcg tgccgccttc gtacacggac
     1021 ccttacgacg tgcgcgaggt catcgcccgc ctggtcgacg gctcggactt cctggaattc
     1081 aagggcctct acgaccagca gacgatctgc ggctgggccg agatcgaggg cgagccggtg
     1141 gccttcatcg gcaacaacgg gccgatcacc accaagggct cggtcaaggc cgcgcaattc
     1201 atccagctct gctgccagca gggcacgccc atcgtctatc tgcagaacac caccggctac
     1261 atggtcggca ccgaggccga acgcggcggc atcgtcaagc acggctccaa gatgatccag
     1321 gcggtggcca atgccacggt gccgcagatc acggtggtga tcggcgggtc gttcggcgcc
     1381 ggcaactacg gcatgtgcgg ccgcgcctac gatccgcgct tcatcttcgc ctggcccaac
     1441 agccgcaccg cggtgatggg cggcgagcag gccgccggcg tcatgaagac ggtgaccgag
     1501 cagaagtttt tgcgcgaagg caaggagccg cccaaggagc agatcgacaa gatgtacaag
     1561 ggcatcgtcg atcagttcga ccgcgaatcg acggcgctct acggcacggc gcatctgtgg
     1621 gacgacggca tcatcgaccc gcgcgatacg cggcgtatcc tggcctttac cctgtcgatc
     1681 gcccgcgagt cgctggtgcg gccgctcaat cccatcacct ttggcgtcgc aaggatgtag
     1741 agatgaagtt cacccccgaa cacgaggcgc tgcgccagac ctggaagacg ctgatcgacc
     1801 gcgagatcaa tcccaacgtc gacgaatggg agaaggaagg cgccttcccg gcccatgagc
     1861 tgttcaagaa gatgggcgac gcgggccttc tcggcgtcga caagcccgtg cagttcggcg
     1921 gctcggggct cgacttctcc tatgccatga tctgcgcgga atcgctcggg ctggtgaatg
     1981 gcggctcgat cccgatggcg accggcgtgc agatctccat ggccacaccg gcgctcgccc
     2041 gctacggcag cgacgagctg cgccaggagt ttctggcgcc ctcgatcagc ggcgactacg
     2101 tcgcctgcct cggcgtgtcg gagaccggcg cgggctcgga cgtcgcctcg atcaagacca
     2161 acgcgcgccg cgtcggcggc gactgggtga tcaatggcgg caagatgtgg acgaccaacg
     2221 gcgcgcaggc cgactggatg tgccttttag ccaataccgg cgacggggcg gtgcacaaga
     2281 acaagtcgct gattgtcgtg ccgatgaagg cgacgggcgt gcagatcgtg aaaaagctcg
     2341 acaagctcgg catgcgcgct tccgacaccg tgcagacctt tttcgacgag gtgaaggtgc
     2401 cggtgcgcta cacgatcggc cagcccggcg caggcttcat ctaccagatg cagcagttcc
     2461 aggaggagcg gctgtgggcc ggcgccggca ccttgatggg ctgcgaccgc atcatcaacg
     2521 ccaccattga gtacacgcgc gagcgcatgg tgttcggccg tccgctgctc gacaaccagg
     2581 tcatccattt ccgcctggcc gagctcaaga gcgaggtcga ggccttgcgc tctctcgtct
     2641 accgcgcgtg cgaggactat ctcgccggca ccgacgtcac catgctggcc tcgatggcca
     2701 agctgaaagc cggccgcctg cgccgcgaag tgtccgacgc ctgcctgcaa tactggggcg
     2761 gcgcgggcta tctgtgggac aatccggtcg cccgcagcta tcgcgacggc cgcctcggct
     2821 cgatcggcgg cggcgccgac gaggtcatgt tgcagatcat ttccaagctg atgggcaccc
     2881 tgccccgatt gggtaaccga tgaggactca tggctgggag cgcgccactc cagtggcgct
     2941 ttcttcggcc tccccaagca atgcttgggg aggtgtccgc attgcggacg gaggggtcat
     3001 gagcggcatc gcaactcatg accccttcgg ccctgcgggc caccttcccg cgcgtccgcg
     3061 cggagaggaa tacatgagcg ccacggagtg gcgcgctccc agcaaagact aggagacact
     3121 tcgtgcaatt cacgcctgaa cacgccgaaa tccgccgcac gctgcgcgcc atcatcgaca
     3181 aggacatcaa tccgcatgtc gaccaatggg aagaggacg
//
LOCUS       DASWGA010001035         2469 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1011990, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001035 DASWGA010000000
VERSION     DASWGA010001035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1011990"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VF991_23630"
     CDS             complement(<1..666)
                     /locus_tag="VF991_23630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX9559504.1"
                     /translation="MARKTDLTAPQPSTAGDVDRFMRELAEMAPRASGTRGRLLFAMD
                     ATASREPTWDLASSLQGEMFVAASQSGGLDIRLAFYRGFDEFKVSRWTSDGRELARLM
                     SAVRCLAGRTQIARLLRYAVEQRRDSRIDAVVFVGDCCEEDVDAVGHEAGQLGLLGLP
                     VFVFHEGEDRVASRLFPQIAKLTRGAYCKFDRSSPDQLKRLLGGIAQQTTDLRAPGQA
                     AHRA"
     gene            903..1757
                     /locus_tag="VF991_23635"
     CDS             903..1757
                     /locus_tag="VF991_23635"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX9559505.1"
                     /translation="MQVFPGWTFAREYFVEHRWMATRRGVLWRFALRNKLVVPLVLPW
                     HAGSKVEVTLGNDLSLCLYVCGSFEPNEFAFLDRMLRRGMTVIDVGANDGLYTLFAAR
                     RVGRRGRVVAVEPSSRERRNLERNLALNRLKNVMVVPNALAAEAGRADLQIAPAVHGG
                     HNTLGGFAHEGVRAIASESVAVETLDAVAQRLALGKVDVAKIDVEGAEVKVLTGGRAL
                     LMASHPVLLIEANDDALRKQGTSTDDLIALLRSLDYEIFIFSDATGLVERWIDGTPLS
                     ANIVAMPK"
     gene            1818..>2469
                     /locus_tag="VF991_23640"
     CDS             1818..>2469
                     /locus_tag="VF991_23640"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559506.1"
                     /translation="MTGNAATFATLFLRVFLPFAFAYFLSYIFRGVNAVIFPYLERDI
                     GITAGDLGLLTSAFFLFFAGCQPVLGVMLDRYGPRRVQAVLLAMAAAGSTLFGLSLSL
                     GELIVARVLIGLGFAGGLMAAIKAITIWYPSERWGLITGFHMMAGGLGSMAATLPIEW
                     SLSVVSWQGLFFWLAGLCLATAAILFVVVPERPVAAAKGTLGEQFRITGAVLTDGFY"
BASE COUNT          372 a          833 c          792 g          472 t
ORIGIN      
        1 agcgcggtgc gctgcctggc cgggcgcacg cagatcggtc gtctgctgcg ctatgccgcc
       61 gagcagccgc ttgagctggt cggggctcga gcggtcgaac ttgcaatagg cgccgcgcgt
      121 cagcttggcg atctggggaa acagccgcga ggcaacgcga tcctcgccct cgtggaagac
      181 gaacaccggc aggccgagca ggccgagctg tcctgcctcg tggccaaccg catcgacatc
      241 ctcctcgcag caatcgccga caaagaccac cgcgtcgatg cgactgtcgc gccgctgctc
      301 gacggcatag cgcagcagcc gggcgatctg ggtgcggccg gccaagcaac gcaccgcgct
      361 catcaggcgg gcgagctcgc ggccgtcgga cgtccagcgg ctcaccttga actcatcgaa
      421 tccacgatag aacgccagac gaatatcgag gccgccgctt tggctggcgg caacaaacat
      481 ctcgccttgc agggacgatg cgaggtccca ggtcggttcg cggctggccg tcgcatccat
      541 ggcgaacagc aggcgccctc gcgtgcccga cgctcgcggt gccatttcgg ccagctcgcg
      601 cataaagcga tcgacgtcgc ctgcggtcga tggctgtggc gctgtcagat cggtttttcg
      661 cgccatgcaa cgcctcctct tgcggtcaat ataggccgtt ttcgccttgt cggcgtcgaa
      721 ttccgccgac aacactgcgc ggcatgcaag aagccgttcc ctcgaccaga tttggcagat
      781 ggtgggtcaa gcgccgccgg cgcctcgccg tctggctcga cgagatcggt ccccggtggc
      841 tggtcgagcg cccgtccttg ggtcgactat ttgcacgctg cctggccggc ggcaggcctt
      901 cgttgcaggt ctttcccggc tggactttcg cccgcgagta tttcgtcgag caccgttgga
      961 tggcgacgcg gcgcggcgtg ctctggcgct ttgcactcag gaacaagctg gtcgttcctc
     1021 ttgtcctgcc ttggcatgca gggtccaagg tcgaggtgac gctcggcaac gacctcagcc
     1081 tctgcctcta tgtgtgcggc tcgttcgaac ccaacgaatt tgccttcctc gatcgaatgc
     1141 tgcgccgcgg catgaccgtc atcgatgtcg gcgccaatga tggcctctac accttgttcg
     1201 ccgcccgccg cgtcggccgg cgcggccgcg tggtcgcggt cgaaccgagt tcgcgcgagc
     1261 gccgaaacct cgaacgcaat ctggcgctca atcgactgaa gaacgtgatg gtcgtgccca
     1321 acgccttggc cgccgaagcc ggccgcgccg atctgcaaat cgcgccggca gtgcatggcg
     1381 gacacaacac gctaggcggc ttcgcccatg aaggtgtgag ggcaattgcc tccgagtcgg
     1441 tcgctgtcga gacactcgat gctgtcgccc agcggctcgc gctcggcaaa gtcgatgtgg
     1501 ccaagatcga cgtcgaaggc gccgaggtga aagtgctcac ggggggtcgc gccctgttga
     1561 tggcatcgca tccggtgctg ctgatcgagg ccaacgacga tgcgctgcga aaacagggaa
     1621 cgagcaccga cgatctgatc gcgctgctgc gctcgctcga ctacgagatt ttcatcttct
     1681 ccgatgccac cggcctcgtt gaacgctgga tcgacggcac gccgctctcc gccaacatcg
     1741 tcgccatgcc gaagtaatct ttgaccccct ccggggtgtg aaatatggtg cgcgccgcgc
     1801 ccagcgccaa tgcaaacatg accggaaacg ccgcgacctt cgccacgctg ttcctgcggg
     1861 tcttcctgcc gttcgcgttc gcctatttcc tgtcctacat cttccgcggc gtgaacgcgg
     1921 tgatctttcc ctacctcgaa cgggacatcg gcatcaccgc gggcgatctc ggtcttctga
     1981 cctccgcctt cttcctgttc ttcgccggct gccagccggt gctgggcgtc atgctcgacc
     2041 gctacgggcc gcgccgcgtg caggcggtgc tgctggcgat ggccgcggcg ggctcgaccc
     2101 tgttcggtct cagcctctcg ctcggcgagc tgatcgtggc ccgcgtgctg atcgggctcg
     2161 gcttcgccgg cgggctgatg gcggccatca aggccatcac gatttggtat ccgtccgaac
     2221 gctggggctt gatcaccggt ttccacatga tggcgggcgg cctcggctca atggccgcga
     2281 cgttgccgat cgagtggtcg ctgtcggtcg tgagctggca agggctgttc ttctggctgg
     2341 ccggcctctg cctcgcgacg gcggcgatcc tgttcgtcgt cgtgcccgag cgccccgtcg
     2401 ccgccgccaa aggcacgctg ggcgagcagt tccgcatcac cggcgcggtg ctgaccgacg
     2461 gtttttact
//
LOCUS       DASWGA010001036         3902 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2402466, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001036 DASWGA010000000
VERSION     DASWGA010001036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3902
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2402466"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VF991_23645"
     CDS             complement(<1..469)
                     /locus_tag="VF991_23645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9559507.1"
                     /translation="MTATHRSKVVILGSGPAGYTAAIYAARASLKPMLVQGIQPGGQL
                     TITTDVENYPGFADVIQGPWLMEQMQKQAEHVGTELFFDTVIDVDLSRRPFVCTGDSG
                     DRYEAQALVISTGATAKWLGLPSEETFRGGGVSACATCDGFFYRGKEVIVVGGG"
     gene            646..1122
                     /locus_tag="VF991_23650"
     CDS             646..1122
                     /locus_tag="VF991_23650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019977129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX9559508.1"
                     /translation="MARAKLDRIDRRILSDLQSNGRMTNVELAERAGISAPPCLRRVR
                     ALERAGIIKGYHADLSAEALGYSVSVFALVGLNSQAETDLKAFETLIAKWDEVRECHM
                     LAGEADFLLKIVAETWDDYQKFLTTRLTSAPNVSHVKSMMVFRTAKQLPGVPISVE"
     gene            1209..1775
                     /locus_tag="VF991_23655"
     CDS             1209..1775
                     /locus_tag="VF991_23655"
                     /inference="COORDINATES: protein motif:HMM:NF016189.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein IspZ"
                     /protein_id="HEX9559509.1"
                     /translation="MNHFMQSARLLISDLASTLLFLAVLLITKDLILAVALGVGLGVI
                     QIGWLMARRKPIDTMQWLSIGLVVVSGAATMLTSDARFVMLKPTVIYCIVGVYMLRPG
                     WMNRYLPPIAIQTVPDLAYIFGFVWAGLMFLSAALNVALALSLDPVTWSATMSAWGIA
                     SKVALFLVQFAMMRLIGRRRAMAMAASS"
     gene            complement(1824..2297)
                     /gene="greA"
                     /locus_tag="VF991_23660"
     CDS             complement(1824..2297)
                     /gene="greA"
                     /locus_tag="VF991_23660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEX9559510.1"
                     /translation="MERVPTTAEGLKVLADELKQLKSIERPAIIKAIAAARDHGDISE
                     NAEYAAARERQSFVEGRIAEIEDIISRAQVIDFSKLSGKVVKFGATVRLADEDTDEKV
                     KYQIVGPYEADLARGRISVTSPIGRALIGKTVGDTVEVQTPRGARSYEVVGVQFK"
     gene            complement(2387..>3902)
                     /gene="carB"
                     /locus_tag="VF991_23665"
     CDS             complement(2387..>3902)
                     /gene="carB"
                     /locus_tag="VF991_23665"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019997932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEX9559511.1"
                     /translation="IEFDYCCVHAVYALREAGYETIMVNCNPETVSTDYDTADRLYFE
                     PLTAEDVIELVEVERSNGELLGLIVQFGGQTPLKLAKPLEAAGIPILGTSPDAIDLAE
                     DRERFQKLIHKLGLSQPDNGTATSQDKAITIADRIGYPVVIRPSYVLGGRAMQIVYDR
                     DGLERYMRDAVKVSGANPVLIDSYLRDAIEVDVDALADNDQNVFVAGIMEHIEEAGIH
                     SGDSACSLPPYSLPPKILAEIERQTEAMARALKVVGLMNVQYAVKDGEVYVLEVNPRA
                     SRTVPFVAKATGQPIAKYAARLMVGESLKSLAIKKARGKHIAVKEAVFPFARFPGVDI
                     ILGPEMRSTGEVMGLDSNFGRAFAKSQLGAGSKVPLNGVVFVSVKDQDKAAMVKPVRR
                     LIDLGFKVVATGGTADFLGRHGIEAQRVNKVLEGRPHIVDLMMDGKVQLVFNTVDGAV
                     ALTDSFRLRRTALMHRIAYYTTVAGAKASVEGITALSEGALDVAPLQSYFKTVF"
BASE COUNT          645 a         1263 c         1245 g          749 t
ORIGIN      
        1 tgccgccgcc aaccacgatc acttccttgc cgcggtagaa gaagccgtcg caggtcgcgc
       61 aggccgagac gccgccgccg cggaaggtct cctcgctggg caggcccagc catttcgccg
      121 tggcgccggt ggaaatgacc agcgcctggg cttcatagcg gtcgcccgaa tcgccggtac
      181 agacgaacgg ccggcggctg agatcgacgt cgatgacggt gtcgaagaac agctcggtgc
      241 cgacatgctc ggcctgcttt tgcatctgtt ccatcagcca cgggccttgg atgacgtcgg
      301 cgaagcctgg gtagttctcg acatccgtgg tgatggtgag ctggccgccc ggctggatgc
      361 cttggaccag catgggcttg agactcgccc gggcggcata gatggcggcc gtgtagccgg
      421 ccggccccga gcccaggatg accactttgc tgcgatgagt tgctgtcatg tccttttcgc
      481 atcccgccaa ccgcatatct acgacatata tgcaaacctc ttctgcgatg cacggacctt
      541 ctgaaatctg ggcgcaattg ttcacagcag accatcccaa tctcgcaact ttattgcgtg
      601 catggcatgg ttctggcata gaccgcggcc aacggaggaa atcggatggc tcgcgcaaag
      661 ctcgatcgaa tcgaccggcg cattctcagc gacctgcagt ccaacggccg catgaccaac
      721 gtcgaactgg cggaacgggc cggcatatcg gcaccgccct gcctgcgccg ggtgcgggct
      781 ctggagcggg ccggcatcat caagggctac cacgccgacc tcagcgccga agcgctgggc
      841 tacagcgtct cggtgtttgc cctggtcggc ctcaacagcc aggccgaaac cgacctcaag
      901 gccttcgaga ccttgatcgc caagtgggac gaagtgcgcg agtgccacat gctggccggc
      961 gaagccgact tcctgctgaa gatcgtcgcc gagacctggg acgactatca gaaattcctg
     1021 accacccggc tgacctcggc gcccaatgtc agccacgtga aatcgatgat ggtgtttcgc
     1081 accgccaagc agcttcccgg cgtgccgatt tcggtggaat gaaagctctt gcgggaaacg
     1141 ctgtgtattg ttagcgtggt aaaaatacac gccgttaccc tttagtgtcg ccaaccgtgg
     1201 aggctcgcat gaaccacttc atgcaatcgg cccggctgct gatctccgat ctcgcctcga
     1261 ccctgctgtt ccttgccgtc ctgctgatca ccaaggacct gatcctggcg gtggccttgg
     1321 gcgtgggtct gggcgtgatc cagatcggct ggctgatggc gcgccgcaag ccgatcgaca
     1381 ccatgcagtg gctgagcatc ggcctggtcg tcgtctccgg tgcggcgacg atgctgacca
     1441 gcgatgcccg cttcgtgatg ctgaagccca ccgtcatcta ctgcatcgtc ggcgtctaca
     1501 tgctgcggcc gggctggatg aaccgctacc tgccgccgat cgccatccag accgtgccgg
     1561 acctcgccta tatcttcggc ttcgtgtggg ccgggttgat gttcctctcg gccgcgctca
     1621 acgtcgcgct ggcgctctcg cttgatcccg tgacttggtc ggcgacgatg tcggcctggg
     1681 gcatcgccag caaggtcgcg ctgtttttgg tgcagttcgc catgatgcgc ctgatcggac
     1741 ggcggcgcgc tatggcgatg gcggcctcta gttgaactgc atgcgcccgg cgcggggcgc
     1801 agccccgcgg tcagcgacga tgtctacttg aactggacgc ccacgacctc gtaggagcgc
     1861 gcgccgcgcg gcgtctggac ctcgaccgtg tcgcccacgg tcttgccgat cagcgcccgg
     1921 ccgatcggcg aggtcaccga gatgcggccc ctggcgagat cggcctcgta gggcccgacg
     1981 atctgatact tcaccttctc gtcggtgtcc tcgtcagcca gccgcacggt ggcgccgaac
     2041 ttcacgacct tgcccgagag cttgctgaag tcgatcacct gggcgcgcga gatgatgtcc
     2101 tcgatctcgg caatgcggcc ttcgacgaag ctctgtcgct cgcgcgcagc ggcatactcg
     2161 gcgttctccg aaatatcgcc gtgatcgcgc gccgccgcga tcgccttgat gatcgccggc
     2221 cgctcgatgc ttttcagctg cttcagctcg tccgcgagga ccttcagccc ctcggccgtt
     2281 gtcggaaccc gttccatcgt ccaatcgtcc ccaatgaatc gtgcgccgtc aacggccaac
     2341 gcgggccccc atcgggcggc ttcgcgcaag gcgcctcgat tggcggctaa aacacggtct
     2401 tgaagtagga ttgcagaggc gccacgtcca gggccccttc actcagcgcc gtgatgccct
     2461 cgaccgaggc cttggcgccg gcaaccgtgg tgtaataggc gattctgtgc atcagcgcgg
     2521 tgcgtctgag cctgaagctg tcggtcagcg ctactgcgcc gtcgacggtg ttgaacacga
     2581 gctgcacctt gccgtccatc atcaggtcga cgatgtgggg acggccttcg agcaccttgt
     2641 tgacgcgctg ggcctcgatg ccgtggcggc ccaggaagtc ggcggtgccg ccggtcgcca
     2701 cgaccttgaa gccgagatcg atcaaccgtc tcaccggctt taccatcgcg gccttgtcct
     2761 ggtccttgac cgacacgaag accacgccgt tgagcggcac cttgctgccg gcgccgagct
     2821 gggacttggc gaaggcgcgg ccgaagttcg aatcgagacc catgacctcg ccggtcgagc
     2881 gcatctcggg accgaggatg atatcgacgc cggggaagcg cgcgaatgga aacaccgctt
     2941 ccttgaccgc gatgtgcttg ccgcgcgcct tcttgatggc gagcgatttc agggattcgc
     3001 cgaccatcag gcgggcggca tatttggcga tcggctggcc ggtcgccttg gcgacgaacg
     3061 gcacggtccg gctggcgcgc ggattgacct ccagcacgta gacctcgccg tccttgacgg
     3121 cgtattgcac attcatcagg ccgaccacct tgagcgcccg cgccatcgcc tcggtctggc
     3181 gctcgatctc ggccaggatc ttgggcggca gggagtatgg tggcagcgaa caggcggagt
     3241 cgccggaatg gattccggcc tcctcgatat gttccatgat gccggcgacg aagacgtttt
     3301 ggtcgttgtc cgccagcgca tcgacatcga cctcgatggc gtcgcgcagg taggagtcga
     3361 tcagcaccgg attggcgccc gacaccttca ccgcgtcgcg catgtagcgc tccaggccgt
     3421 cgcgatcgta gacgatctgc atggcgcggc cgcccagcac gtaggacgga cggatgacga
     3481 ccggatagcc gatcctgtcg gcgatggtga tcgccttgtc ctgcgacgtc gccgtgccgt
     3541 tgtcgggctg gctgaggccg agcttgtgga tcagcttctg gaaacgctcg cggtcttccg
     3601 ccagatcgat ggcatcgggc gaggtgccga ggatgggaat gcctgccgcc tcgagcggct
     3661 tggcaagttt gagcggcgtc tggccgccga actgcacgat caggcctaaa agctcgccgt
     3721 tgctgcgctc gacctcgacc agctcgatca cgtcctcggc agtcagcggt tcgaagtaga
     3781 gccggtcggc ggtgtcgtag tcggtcgaca ccgtctcggg attgcagttg accatgatgg
     3841 tctcgtagcc ggcctcgcgc agggcgtaga cggcgtgcac gcagcaatag tcgaactcga
     3901 tg
//
LOCUS       DASWGA010001037         1669 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1264656, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001037 DASWGA010000000
VERSION     DASWGA010001037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1669
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1264656"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1669)
                     /locus_tag="VF991_23670"
     CDS             complement(<1..>1669)
                     /locus_tag="VF991_23670"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HEX9559512.1"
                     /translation="APLARFEQFFREGGVDNLRQALRYAATLLGRDLAWTPPAPVGPL
                     SLLGDASEGRPAALVVFYRANLMAGDIAPVTALMAALERQGLAPLGVAVSSLKDPAIR
                     SALEGLLAARKPAIILNTTAFSAMREDDTTVLDAADVPVLQVVLSGSTREAWQSSPRG
                     LSPADLAMNVVLPELDGRLLTRAISFKAEAPVDPRLEFASVRHQPEPDRVDYVARLAA
                     AWARLGRTPTKDRRLALVLSDYPARGGRTGYAVGLDTAASAAEILKLLGGQGYDTGQR
                     DWQAADVERLLRGEVEHIEIPMAAQGAVPVLRCGKVLVLLQPDRGGAGDRKSGYHDVN
                     CPPSHAYVALYAWLRETARIDALIHLGTHGTLEWLPGKALALSADCWPETVLGALPVV
                     YPFIVNNPGEAVQAKRRLAAVTIGHLTPPLSAAGLHGPLAELEGLVEEYAAADGLDRR
                     RQRLLEDEIVERAWTSGLAADCGLVKGEPNRQAIAKLDAQLCDIKELSIRDGLHVFGQ
                     APDEETVQALAVATGNEAAVRACADRERAALLAALDGRRVAPGPAGAP"
BASE COUNT          252 a          587 c          594 g          236 t
ORIGIN      
        1 cggcgcaccg gccggaccgg gcgcgacgcg ccgtccatcg agcgcggcca ggagggccgc
       61 acgctcgcga tcggcgcagg cgcgcacggc cgcttcgttg ccggtcgcca cggcgagcgc
      121 ctgcaccgtc tcttcatcgg gcgcctggcc aaagacgtgc aagccgtcgc ggatgctgag
      181 ttccttgatg tcgcaaagct gggcgtcgag cttggcgatc gcctgccggt tgggctcgcc
      241 tttgaccaat ccgcagtcgg cggccagccc gctcgtccac gctcgctcga cgatctcgtc
      301 ttccagcagc cgctggcgtc gccggtcgag gccgtcggct gcggcatatt cctcgacgag
      361 gccttcgagc tcggccagcg ggccgtgcag gccggcggcg ctgagcggcg gcgtcaggtg
      421 gccgatggtg acggccgcga gacgccgctt ggcctgcacc gcttcgccgg gattgttgac
      481 gatgaaggga tagaccaccg gcagcgcgcc cagcactgtc tcgggccagc agtcagccga
      541 cagcgccagc gccttgccgg gcagccattc cagggtgcca tgcgtgccga gatggatcag
      601 ggcgtcgatc cgcgcggtct cgcgcagcca ggcatagagc gcgacgtagg cgtggctggg
      661 cgggcaattg acgtcgtgat agcccgactt gcgatcgccg gctccgccgc ggtcgggctg
      721 cagcagcacc aaaactttgc cgcagcgaag caccgggaca gcgccctgcg ccgccatcgg
      781 gatctcgata tgttcgacct ctccccgaag caggcgctcg acgtcggccg cctgccagtc
      841 gcgctggccg gtgtcgtaac cttgaccgcc gagcagcttc aggatctcag cagcacttgc
      901 cgctgtgtcg agaccgaccg catagcccgt ccgaccgccc cgcgccgggt aatcggacag
      961 gaccagcgcc aggcggcgat ccttcgttgg cgtccgcccg agccgcgccc aggccgctgc
     1021 aagccgcgcg acgtagtcga cgcgatcagg ctcgggctgg tgacgcacgc tggcgaattc
     1081 gagccgcgga tcgaccggtg cctcggcctt gaaggagatg gcgcgcgtca gcagacgtcc
     1141 gtcgagctcg ggcaggacca cgttcatggc gagatcggca ggcgacaggc cgcgcggcga
     1201 gctttgccag gcctcgcgcg tgctgccgga caggaccacc tgcagcaccg gcacatcggc
     1261 ggcgtcgagc acggtcgtgt cgtcctcgcg catggccgag aaggcggtgg tgttgagaat
     1321 gatcgcgggc ttccttgccg ccagcaggcc ttccagcgcc gaccggatcg cgggatcctt
     1381 caggctgctc accgccacgc cgagcggcgc cagcccttgc cgctcgagcg ccgccataag
     1441 ggcggtgacc ggcgcgatgt cgccggccat caggttggcg cgatagaaga cgaccagcgc
     1501 ggccggccgg ccttctgacg cgtcgccgag cagggaaagc gggccgaccg gcgccggcgg
     1561 cgtccaggca agatcgcgac ccagcaaggt cgcggcgtaa cgcaaggcct ggcgcaggtt
     1621 gtcgacgccg ccttcgcgga aaaactgctc aaaacgggcg agcggcgcc
//
LOCUS       DASWGA010001038        10823 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_245518, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001038 DASWGA010000000
VERSION     DASWGA010001038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 10823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10823
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245518"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..650
                     /locus_tag="VF991_23675"
     CDS             <1..650
                     /locus_tag="VF991_23675"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX9559513.1"
                     /translation="YDPDKDFVLISWMNAGHLPTIVSKEVAAKNLAEFAAWARGRKVS
                     LGTYGAGSYSHVVVETINRHYGLAIEAVHYRGEALMWQDVASGAVQGGTGSIAGAASV
                     LQSGSGRPIAVPSMTRSKKLPDVPTFNEQGLTEQAFQVRGWIGLVGPAGIKPEIVQKL
                     SDLMVEGGKTERIQKILDTFGIDESARDNRYFEKVVREEGPIWIDLIKSLNLEPQ"
     gene            887..1594
                     /locus_tag="VF991_23680"
     CDS             887..1594
                     /locus_tag="VF991_23680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559514.1"
                     /translation="MALDVYVGSLTRYYAGEWENIAEKAARERGAPYRIARPGGSDRH
                     KDPQTIQAAIEAWRSALSTSLGSNIARPLDWDDTLEAPYFTGRPGWDGFGSLVLWAAY
                     AENPALRRPDILPEEWDNDPALIRSNASGFRSRYSHLVRNVELWLPTPFEFTFEGEDV
                     DGRRVVVGSTMTLRRQLDELNAATWKASAAVVGQWGREPPAEDTALELCARYAFAILL
                     DLSRAAVERRLPMKMDY"
     gene            complement(1588..1959)
                     /locus_tag="VF991_23685"
     CDS             complement(1588..1959)
                     /locus_tag="VF991_23685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559515.1"
                     /translation="MTIAFAAGAAVLGIATAIGHSLISERMILGPLYAGTPGGVLKSR
                     STRAIIRAVFHMPSLAWAVLGIAVLAARIEGGNQLLSIVALILFAGSGIGNLAALRRP
                     HFGGLMLLGAAALTLADLMLQ"
     gene            complement(2030..2464)
                     /locus_tag="VF991_23690"
     CDS             complement(2030..2464)
                     /locus_tag="VF991_23690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2852 domain-containing protein"
                     /protein_id="HEX9559516.1"
                     /translation="MTGLMERLDDIPRPAWIALVVVSFIVFWPIGLALLIYLKWSGRM
                     FCSRHGRYGHWSGPDGREAREEFRAWRRRHRWGRYDASGNVAFDEYREETLRKLDEEQ
                     REFRDFLDRLRAAKDRAEFDEFMNERRNRPPASEPPPAPSAA"
     gene            complement(2547..3179)
                     /locus_tag="VF991_23695"
     CDS             complement(2547..3179)
                     /locus_tag="VF991_23695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9559517.1"
                     /translation="MSWKRRAERAYHHGNLREALIQAARELIKEKGPAGFTFADAARS
                     AGVSAAAPYRHFRDREALLADVAREGFQRFEAMLSTGWANGRPDALTAFHNVGKAYLA
                     FARAEPAYYAAMFESGLPPDLNTELRAAADRAFGVLRTAADALVAMLPSGKRPPAMMM
                     SLHVWSMAHGIASLFGRGDAGRRTLPMTAEELLESEMLIYLQGLGFPQKA"
     gene            3262..4326
                     /locus_tag="VF991_23700"
     CDS             3262..4326
                     /locus_tag="VF991_23700"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX9559518.1"
                     /translation="MELWTTGVAAARSSARTAQEIEAAGWDGMLVVDSQNLSGDPYVS
                     LALAATATTRIGLGTGVTNSVTRHAAATATAITSVNRVSNGRAVLGIGRGDSALAHLG
                     RAPARLAQFERYLRQLQTYLRGESVSFDDIDIPHDVAPPMSALALHDAPSASRIAWIA
                     DGAKVPVEVAASGPKVIAMAALHAERVMFALGADVERLTWGIALARQTRKAAGLDPDG
                     VAFGAYVNLGCHNDMAAARALVRGGLTTFARFAVMHGKASGPVSAGDRAVLEALRSNY
                     DMRAHTRGDSRQAGTLTDDFIDRFAIVGPPERCIQRLRSLAALGLDKVAISGGTRGAA
                     ANDIAVSKQLVAAHVLPAVQ"
     gene            complement(4327..5856)
                     /locus_tag="VF991_23705"
     CDS             complement(4327..5856)
                     /locus_tag="VF991_23705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEX9559519.1"
                     /translation="MPYASLRDFIARLEQCGRLVRVKAPVSPHLEMTEIQTRLLAEKG
                     PAVLFENVVRADGTRSDIPVLVNLFGTVERVAWGMDREPHELRGVGETLAFLRQPEPP
                     GGWREALDMLPLLRSVMAMKPKTVGGAPCQEIVLTGNDIDLGRLPIQTCWPGEPAPLI
                     TWPLIVTQGPNPPNRQGGDKQDSFNLGIYRLQVTSRNTTLMRWLKHRGGAQHHQRWKG
                     AGKREPLPVAAVIGADPGTILAAVTPVPDTLSEYQFAGLLRGKKVELVDCKTVPLKVP
                     AEAEIVLEGHVSLDDYGDEGPYGDHTGYYNSVEKFPVFTLSAITMRRQPIYLSTFTGR
                     PPDEPSVLGEALNEVFIPLFQQQFPEIVDFWLPPEGCSYRIAVVSMKKAYAGHAKRVM
                     MGVWSYLRQFMYTKWVIVVDADIDARNWKDVMWAVSTRMDPARDITVIENTPIDYLDF
                     ASPVSGLGSKIGLDATDKFPGETNREWGRQIRMDQAVIDKVDAMWSELGLPGNGRKIW
                     R"
     gene            6040..6711
                     /locus_tag="VF991_23710"
     CDS             6040..6711
                     /locus_tag="VF991_23710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559520.1"
                     /translation="MLAGTHALCGKLADPKVRFLERNDLLDRAKAERVRRALEAALVD
                     KLEILERPILPESIFAMRHDYGELLPKTSRARTIYFESRREPGAKEAERIGLVRLMRS
                     ASFRAFAEALAGRKLAAGWGLQALRYGPGDYAGPHNDHHPENKDARGGYIDLHISLCS
                     PGVAHQWLVYSRAGHFSQIVSVAKPASVTAYRLPFWHYTTPLVAKRGHLEAARWVLLG
                     TFLYR"
     gene            6748..7479
                     /locus_tag="VF991_23715"
     CDS             6748..7479
                     /locus_tag="VF991_23715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
                     /protein_id="HEX9559521.1"
                     /translation="MGRLEHLHFPNEGASYRHARNALLGEEMELRRQVERVAAHRRAL
                     PKGGAVREDYVFESAGENGKPTGVKLSQLFAPGKDTLAVYSFMFGPERERPCPGCTHF
                     LDGLDGSAQHILQRVNLVVVAKSPLPRLLAFAKERGWRHLRLLSTAGNDYDRDYFGDS
                     TALSAAMRDQQEFKPGEEWDMPMLNVFRREGGAIRHFWGSELLYVPPEPGQQYRHNDL
                     LDPVWNLFDVTPEGRGDFEPKLDYR"
     gene            complement(7483..7935)
                     /locus_tag="VF991_23720"
     CDS             complement(7483..7935)
                     /locus_tag="VF991_23720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016450861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HEX9559522.1"
                     /translation="MRRSILALLLMLASPAVAEEIGSVGYRFKWLGPNDKIVVEAFDD
                     PDVPGVTCYMSHARTGGIKGAIGLAEDPGEASIACRQVGPIDEAKLVHLKNPHEVFSE
                     RASLIFKTTQVTRFWDAKRKALVYLVYTDRIIEGSPRNSISVVPLAAK"
     gene            complement(7961..8701)
                     /locus_tag="VF991_23725"
     CDS             complement(7961..8701)
                     /locus_tag="VF991_23725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559523.1"
                     /translation="MPQTAITPGDFASLYEGFTAPVSRFDCGRKCAPLNGGEPVCCST
                     QNAVPVVHKVEFELLKGRSDLWSKFTPYDYATRQIVAELTSDCMAIHCKGARHCERDN
                     RTIACRGFPFYPYLTRERQFVGIGIYWVFEDRCWMMSNLEIVDRAFVEQFIATYEALF
                     IKDRSEFTTYVDFSASARRVYSRWKREIPLLGRAGELLVVEPSTGTIRLGRKKDFPKA
                     KPFTSEKEYRAAIKEAGGEVPNQGLRAV"
     gene            complement(8714..9388)
                     /locus_tag="VF991_23730"
     CDS             complement(8714..9388)
                     /locus_tag="VF991_23730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012652674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX9559524.1"
                     /translation="MSRLPADPEAFIRANTALEAPAMVPEFKLWLASEYVPIWQATEA
                     WLEEHNVDPPYWAFCWPGGQAIARYLLDNPAEVRGKRVIDFAAGSGVSSLAAARAGAA
                     SVLANDIDALSLVAARLNARANDISFEISRDDWLAGPDGAPDADVVIAGDVCYEREMS
                     ARALAWLRGHARLGRLVLLGDPGRNYFSAQGLEERARYEIPTSLQLENRGMRETVVWR
                     VLPHPC"
     gene            complement(9392..10315)
                     /gene="ubiA"
                     /locus_tag="VF991_23735"
     CDS             complement(9392..10315)
                     /gene="ubiA"
                     /locus_tag="VF991_23735"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEX9559525.1"
                     /translation="MTADRTTGFTDIDRRHWSLRYLPPWVRPYGRLARWDRPIGIWLL
                     MLPCWWSLALGAAPQWDRLAGWLALFALGAVAMRGAGCTWNDIVDRKVDAQVERTRGR
                     PLPSGEVTLRNALIWMVLQSLVGAAILFKLNKFAGGVALASLILVAIYPTMKRYTSWP
                     QVVLGLAFNWGALVGYATVTGTLSWATLALYAGGVAWTMVYDTIYAMQDQRDDAVIGV
                     RSTARRFADAPRRWLTLFALLALAAWALAGHLAGLGLNYFAILLAIALHFAWQIAFLK
                     PQDQADCLAKFKANAWIGVLLTAAIIAGHLT"
     gene            10350..>10823
                     /locus_tag="VF991_23740"
     CDS             10350..>10823
                     /locus_tag="VF991_23740"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HEX9559526.1"
                     /translation="MSVSRLFVESDLLAGGEAPLGEAQVHYLRHVMRRPDGAPLLLFN
                     GRDGEWRATLEGHGKKAAVARLGERTREQVAEPDVWLCFAPVKRARIDYIAEKATELG
                     AAVLQPVLTQHTNVERVNVERLRANAIEAAEQTERLTVPDVRAPVELARLLADWPA"
BASE COUNT         1831 a         3548 c         3694 g         1750 t
ORIGIN      
        1 cctacgaccc ggacaaggac ttcgtgctga tctcgtggat gaacgcaggc cacctgccga
       61 cgatcgtcag caaggaggtg gcggcgaaaa acctcgccga gttcgccgcc tgggcgcgcg
      121 gccgcaaggt ctcgctcggc acctatggcg ccggctccta cagccatgtc gtggtcgaga
      181 cgatcaatcg ccactacggg ctggcgatcg aggccgttca ttatcgcggc gaggcgttga
      241 tgtggcagga cgtggcctcc ggtgccgtgc agggcggcac cggcagcatc gccggcgcgg
      301 cgagcgtcct gcaatccggc agcggccggc cgatcgcggt gccgtcgatg acgcggtcga
      361 agaagctgcc cgacgtgccg accttcaacg agcagggcct gactgagcag gccttccagg
      421 ttcgcggctg gatcggcctg gtcggccccg ccggcatcaa gcccgagatc gtgcaaaagc
      481 tctccgacct gatggtcgaa ggcggcaaga ccgagcgcat ccagaagatc ctcgacacct
      541 tcggcatcga cgagtccgcg cgtgacaacc gctacttcga gaaggtggtg cgcgaggagg
      601 gcccgatctg gatcgacctg atcaagagcc tgaacctcga accgcagtag gtcggcgggc
      661 tgtaagtcag cggccgacgg cggcgagcac ggcggcggca tctgctccgg cgtcgcgctt
      721 ccgggcatcg acggcgccga tagccgtgga acggagctgt ggtgtgggcg ttccccatca
      781 attagacgtt tgcattctgg ctctggctgc gggataaatt ccgctccagg acaaccacaa
      841 gtggcggagc cgcgtagcgc ccggcaacga aaaggacccc tcgttcatgg ctctcgacgt
      901 ctatgtcggg tcgcttacgc gatactatgc cggtgagtgg gagaacatcg cggagaaagc
      961 cgcccgtgag cgcggcgccc cctaccggat cgcgcgtccc ggcgggtcgg atcggcacaa
     1021 ggacccgcaa acgattcagg cggcgatcga agcctggcgt tcggccttga gtacctcgct
     1081 tggcagcaat atcgcgcggc cgctcgactg ggacgatacg ctggaggcgc cctacttcac
     1141 cggccgtccg ggctgggacg gtttcggttc actggtcctg tgggcggcct atgccgaaaa
     1201 tccggcgctg cgccggcctg acatcctgcc cgaggagtgg gacaacgacc ctgccttgat
     1261 acgcagcaac gcgtcgggct tccgctcgcg ctactctcat ttggtgcgca atgtcgagtt
     1321 gtggctgccg accccgttcg agttcacctt cgaaggcgag gatgtcgacg gcaggcgcgt
     1381 ggtcgtcggc tcgaccatga ctttgcgccg ccagctcgac gagctgaatg cggcgacgtg
     1441 gaaggcaagc gccgccgtgg tcggccaatg gggccgcgaa ccgccggctg aagacacggc
     1501 gctcgagctt tgtgcgcgct atgccttcgc gatcctgctc gacctttccc gggcggcggt
     1561 cgagcgcaga ttgccgatga agatggatta ctgaagcatc aagtcggcga gcgtcagtgc
     1621 tgccgcgcca agcagcatga ggccgccgaa atgcggacgg cggagtgctg cgaggttgcc
     1681 gatgcccgag ccggcgaaga ggatcagggc gacgatgctg aggagttgat tgccgccctc
     1741 gatgcgcgcg gcgaggacgg cgatgccaag aacggcccaa gccagcgacg gcatatgaaa
     1801 gaccgcgcgg atgatggcgc gggtggaacg ggatttgagg actccgccgg gagtgccggc
     1861 atagagcggg ccgaggatca tgcgctcgct gatcagcgaa tggccgatgg cggtggcgat
     1921 gccgaggacc gcggctccgg cggcaaaggc gatggtcatt ggagtgcggc cggccccagc
     1981 cctccccctg tgatggggga gggtgcccga agggcgggat ggggcagagt caggctgcgg
     2041 acggggccgg cggcggctcg gacgcgggcg ggcggttgcg ccgttcgttc atgaattcgt
     2101 cgaactcggc gcggtccttg gcggcgcgca gccggtcgag gaagtcgcgg aactcgcgct
     2161 gctcttcgtc gagcttgcgc agcgtctcct cgcgatactc gtcgaaggcg acgttgccgc
     2221 tggcgtcata gcggccccag cgatggcggc ggcgccaggc gcggaattcc tcgcgcgctt
     2281 cgcggccgtc aggtccagac caatggccgt agcggccatg cctcgagcaa aacatgcgtc
     2341 cactccattt gagatagatg agaagggcga ggccgatcgg ccagaagacg atgaagctca
     2401 cgaccaccag ggcgatccag gcgggccggg ggatgtcgtc cagtctttcc atcaggcccg
     2461 tcatggtggg ctcctttgca gcgttaacga tgtaaatgtt aacgacattt acattgggca
     2521 ttccgccaaa aggagtcaag accccttcac gctttttggg gaaaccccaa tccctgcagg
     2581 taaatgagca tctccgattc gagcagctcc tcggcggtca tgggcagggt gcggcgtccg
     2641 gcgtcgccgc ggccgaacag cgaggcgatg ccgtgggcca tcgaccagac gtgcaggctc
     2701 atcatcatcg ccggcggccg tttgcccgac ggcagcatcg ccaccagcgc gtcggccgcg
     2761 gtgcgcagca cgccgaaggc gcggtcggcc gccgcgcgca gctcggtgtt gagatcgggt
     2821 ggcaggcccg attcgaacat cgcggcatag taggcgggct cggcgcgcgc gaaggcgagg
     2881 taggccttgc cgacattgtg gaaggcggtg agggcatcgg gcctgccgtt ggcccagccg
     2941 gtcgacagca tcgcctcgaa gcgctggaag ccttcgcgcg ccacgtcggc caagagcgcc
     3001 tcgcggtcgc ggaagtggcg atagggagcg gccgcgctga cgcccgccga gcgggcagcg
     3061 tcggcgaagg tgaagcccgc cgggcctttc tccttgatca gctcgcgcgc ggcctggatc
     3121 agcgcctcgc gcagattgcc gtggtggtag gcgcgctcgg ctcggcgttt ccagctcatg
     3181 ttaaggcagt ttacattgag gagcgcgagt ccgcagcctc aaatcatgcc agtctccaaa
     3241 tagaccgagc agaggcagaa catggaattg tggaccaccg gtgttgctgc ggcgcgtagc
     3301 agcgcgcgca ctgcgcagga gatcgaggcc gccggttggg acggcatgct ggtggtcgat
     3361 tcgcagaatc tctccggcga cccctatgtc tcgctggcgt tggccgcgac cgccacgacg
     3421 cgcatcggcc tcggcaccgg cgtgaccaat tcggtcaccc gccacgcggc ggcgaccgcg
     3481 acggcgatca ccagcgtcaa tcgcgtctcc aacggccgcg ccgtgctggg catcggccgc
     3541 ggcgattccg cgctcgccca tctcggccgg gcgccggctc ggctggcgca gttcgagcgt
     3601 tacctgcggc agctgcagac ctacctcagg ggcgagtcgg tgagcttcga cgacatcgat
     3661 atcccgcacg acgtggcgcc gccgatgtcg gccttggcgc tccacgacgc cccgtcagcg
     3721 agccgcatcg cctggatcgc cgacggcgcc aaggtgccgg tcgaggtcgc cgccagcggt
     3781 cccaaggtca tcgccatggc ggcgctgcac gccgagcggg tgatgttcgc gctcggcgcc
     3841 gatgtcgaga gattgacctg gggcatcgca ctggcacggc agacccgcaa ggcggcgggc
     3901 ctcgatcccg atggcgtcgc cttcggcgct tacgtcaacc tcggctgtca taacgacatg
     3961 gcggcagcgc gcgccttggt gcgcggcggg ctcacgacct tcgcccgctt tgcggtgatg
     4021 cacggcaagg ccagcgggcc ggtgtcggcg ggcgaccggg ccgtgctcga ggcattgcgc
     4081 agcaactacg acatgcgcgc ccacacgcgc ggcgattccc gccaggccgg cacgctgacc
     4141 gacgatttca tcgaccgctt cgccatcgtc ggcccgccgg agcgctgcat ccagcggctg
     4201 cgttcgctcg cggccctcgg cctcgacaag gtggcgatca gcggcgggac gcgcggcgcg
     4261 gccgccaacg atatcgcggt gagcaagcag ctcgtcgccg cgcacgtgct gcccgccgtg
     4321 caataatcaa cgccagatct ttctcccgtt gcccggcaag ccgagttcgc tccacatcgc
     4381 gtcgaccttg tcgatgacgg cctggtccat gcggatctgg cggccccact cgcggttggt
     4441 ctcgccggga aatttgtcgg tggcgtccag cccgatcttg gagccgaggc ccgacaccgg
     4501 gctcgcgaag tcgagatagt cgatcggcgt gttctcgatc acggtgatgt cgcgcgccgg
     4561 atccatgcgc gtggagaccg cccacatcac gtctttccaa tttcgggcgt cgatgtcggc
     4621 gtccaccacg atcacccact tggtgtacat gaactgccgc agatagctcc acacgcccat
     4681 cattacgcgc ttggcgtggc cggcgtaggc cttcttcatc gagacgacgg cgatgcggta
     4741 actgcagcct tcgggcggca gccagaagtc gacgatctcg gggaactgct gctggaagag
     4801 gggaatgaac acttcattca gcgcctcgcc cagcaccgac ggttcgtcgg gcggccggcc
     4861 ggtgaaggtc gagagataaa tcggttggcg ccgcatggtg atggcgctca aggtgaacac
     4921 cgggaatttc tcgacgctgt tgtagtagcc ggtgtgatcg ccgtagggac cttcgtcgcc
     4981 gtagtcgtcg aggctgacat ggccctcgag cacgatctcg gcttcggccg gcaccttgag
     5041 cggcacggtc ttgcagtcga ccagctcgac cttcttgcct ctgagcaggc ctgcgaactg
     5101 atactccgac aaggtgtcgg gcaccggcgt cacggcggcg aggatggtgc cgggatcggc
     5161 gccgatcacg gcggccaccg gtagcggctc gcgtttgccc gcgcccttcc agcgctggtg
     5221 atgctgcgca ccgccgcgat gtttcagcca acgcatcagc gtcgtattgc ggctcgtcac
     5281 ttgcaggcga tagatgccga gattgaaact gtcctgtttg tcacccccct ggcgattcgg
     5341 tggattgggg ccttgcgtca cgatcaacgg ccaggtgatg agcggcgccg gttcgcccgg
     5401 ccagcaggtc tgaatgggca ggcgaccgag atcgatgtca ttaccggtga ggacgatttc
     5461 ctggcagggc gcgccgccga ccgttttagg cttcatcgcc atcacgctgc gcagcagggg
     5521 cagcatgtcg agcgcctcgc gccagccgcc cggcggctcg ggctggcgca ggaaggccag
     5581 cgtctcgccg acgccgcgca actcatgggg ctcgcggtcc atgccccagg cgacccgctc
     5641 gaccgtgccg aagagattga ccagtaccgg gatgtccgag cgcgtgccgt cggcccgcac
     5701 gacgttctcg aacagcaccg ccggaccctt ctcggccaac agcctcgtct ggatctcggt
     5761 catctcgaga tgcggcgaca ccggcgcctt gacgcgcacc agccggccgc attgttccag
     5821 ccgggcgatg aaatcccgaa gcgaggcgta gggcataggg tcctttagag caggcaaccg
     5881 gtggctgtca tcccgaggcc gcaggccgag ggacctttaa ggccatgagc aaaggtgctt
     5941 cgcttcgctc agcatgacat ttcgcggtag acaggcgccg tgccccattc cgccataccg
     6001 gttgagtttg aggatctact cagtcccgca ggaaggcggg tgctcgccgg cacgcatgcc
     6061 ctgtgcggca agctcgccga tcccaaggtt cgcttcctgg agcgcaacga tcttttggat
     6121 cgcgccaagg ccgagcgggt acgccgtgcg ctcgaggcag cgttggtcga caagctcgaa
     6181 atcctggagc ggccgattct accggagagc atcttcgcca tgcgccacga ctacggcgag
     6241 ctcctgccca agaccagtcg ggcgcgcacg atctactttg aaagccggcg cgagcccggc
     6301 gccaaggaag cggagcggat cgggctggtg cggctcatgc gctcggcatc cttccgcgcc
     6361 ttcgccgagg cgctggccgg ccgcaagctc gccgccggct ggggcctgca ggcgctgcgc
     6421 tacgggccgg gcgattatgc cggtccgcac aacgatcatc atcccgagaa caaggacgca
     6481 cgcggcggtt acatcgacct gcatataagc ctgtgctcgc cgggcgtcgc gcatcagtgg
     6541 ctggtgtata gccgcgccgg ccatttcagc cagatcgtat cggtcgccaa gcctgcgtcg
     6601 gtgacggcct atcgcctgcc gttctggcac tacaccacgc cgctggtcgc caagcgcggc
     6661 catctggagg ccgcgcgctg ggtgctgctg gggacattcc tctaccgcta gcggcaaccc
     6721 gtcccgcccg ccgctcgttt gtctgccatg ggccgcctgg aacacctgca tttccccaac
     6781 gaaggcgcgt cctatcgcca cgcgcgcaac gcgctgctgg gcgaggaaat ggagctgcgc
     6841 cgccaggtcg aacgggtcgc cgcccatcgc cgcgcgctgc ccaagggtgg cgcggtgcgc
     6901 gaggactacg tcttcgaaag cgcgggcgag aacggcaagc cgaccggggt gaagctctcg
     6961 cagctcttcg cgccgggcaa ggacacgctc gcggtctaca gcttcatgtt cggcccggag
     7021 cgcgagcggc cgtgtcccgg ttgcacgcac tttctcgacg gcctcgacgg ttcggcccag
     7081 cacatcctgc agcgcgtcaa cttggtcgtc gtcgccaagt cgccgttgcc gcggctgctg
     7141 gctttcgcca aggagcgggg ctggcggcac ctgcgcctgc tgtcgaccgc cggcaacgac
     7201 tacgaccgcg actatttcgg cgattcgacc gcgcttagcg ccgcgatgcg cgatcagcag
     7261 gaattcaagc cgggcgagga atgggacatg ccgatgctga acgtgttccg tcgcgagggc
     7321 ggcgcaatcc gccacttctg gggctcggaa ctcctctacg tgccgcccga acccggccag
     7381 cagtatcgcc acaacgacct tttggacccg gtgtggaacc tgttcgacgt cacgcccgaa
     7441 gggcgcggcg atttcgagcc caagctcgac tatcgctagc cgctatttcg ccgccagcgg
     7501 caccacgctg atcgagttgc gcggactacc ttcgatgatg cggtcggtgt agacgagata
     7561 gaccaaggcc ttgcgtttgg catcccagaa gcgtgtcacc tgcgtcgtct tgaagatcag
     7621 cgaggcacgt tcgctgaaca cctcgtgcgg gttcttgaga tgcacgagct tggcctcgtc
     7681 gatcgggcca acctggcgac aggcgatcga ggcctcgccc gggtcctcgg ccagcccgat
     7741 tgcgcctttt atgccgccgg tgcgcgcatg cgacatgtag caggtaacgc ccggcacgtc
     7801 gggatcatcg aaggcttcga cgacaatctt gtcgttcggc cccagccatt tgaaccggta
     7861 gccgacggag ccgatttcct cggcgacagc cggcgaggcc agcatcagca gcagagccag
     7921 gatcgatcgg cgcatggaca ggctcccttg tacgggaggc tcagacggca cgcagtcctt
     7981 ggttaggcac ttcgccgccg gcctccttga tcgccgcacg atactccttt tcggaggtga
     8041 agggcttggc cttggggaag tccttcttgc ggccgagccg aatggtcccg gtcgagggct
     8101 cgacgaccaa aagctcgccc gcgcggccga gcagcgggat ctcgcgcttc cagcgcgaat
     8161 agacgcgccg cgccgaggcg gagaaatcga cgtaggtcgt gaattcgctc ctgtccttga
     8221 tgaacagcgc ctcgtaggtg gcgatgaact gctcgacgaa ggcgcgatcg acgatctcga
     8281 ggttggacat catccagcag cgatcctcga acacccagta gatgccgatg ccgacgaact
     8341 gccgctcgcg tgtgaggtag ggatagaagg ggaagccgcg gcaggcgatg gtgcggttgt
     8401 cgcgctcgca atggcgcgcg cccttgcagt ggatggccat gcagtcgctg gtgagttcag
     8461 ccacgatctg gcgggtcgcg tagtcgtagg gcgtgaactt cgaccacaga tcggaccgcc
     8521 ctttgagcaa ctcgaactcg accttgtgca ccaccggcac ggcgttctgg gtcgagcagc
     8581 agaccggctc gccgccgttc aacggcgcgc acttgcggcc gcagtcgaag cgagacaccg
     8641 gcgcggtgaa gccctcgtac aggctcgcga agtcgccagg cgtgatggct gtctggggca
     8701 tgcgatgcgc ggtttaacac ggatgaggca gcactcgcca cacgacggtt tcacgcatgc
     8761 cgcggttctc cagctgcagc gatgtaggaa tttcgtaacg tgcccgctct tcgagccctt
     8821 gggcgctgaa atagttgcgg ccgggatcgc ccagcagcac caaccgaccg agtcgagcgt
     8881 ggccgcgcag ccaggcgagc gcgcgcgccg acatctcgcg ctcgtaacag acgtcgccgg
     8941 cgatgacgac gtcggcatcg ggcgcgccgt cggggccggc gagccagtcg tcccggctga
     9001 tctcgaagct gatgtcgttg gcccgggcat tgaggcgcgc ggcgaccagc gacaaggcat
     9061 cgatgtcatt ggccagcacg gatgcagcac ctgcgcgcgc cgccgccagg gaagagacac
     9121 cggagccggc ggcaaaatcg atcacgcgct tgccacgcac ctcggcggga ttgtccagaa
     9181 gatagcgggc gatcgcctgg ccgcccggcc agcagaaggc ccagtacggc ggatcgacgt
     9241 tgtgctcctc cagccacgcc tcggtcgcct gccagatcgg cacgtattcg ctggccagcc
     9301 acagcttgaa ctccggcacc atcgccggcg cctcgagggc ggtattggca cgaatgaacg
     9361 cctcgggatc ggcgggcagg cgcgacatga tctaggtcaa atggcctgcg atgatggccg
     9421 cggtcagcag cacgccgatc caggcattgg ccttgaactt ggccaggcag tcggcctggt
     9481 cctgcggctt caggaaggcg atctgccagg cgaagtggag cgcgatcgcg agcaggatgg
     9541 cgaaatagtt gaggccaagg cccgcgagat gacccgccag cgcccacgcc gcgagcgcca
     9601 ggagggcgaa cagcgtgagc cagcgccgcg gcgcatcggc gaagcgccgc gccgtcgagc
     9661 gcacgccgat gacggcatcg tcgcgctggt cctgcatggc gtagatcgtg tcgtagacca
     9721 tcgtccaggc gacgccgccg gcatagagcg cgagcgtggc ccacgacagc gtgccggtca
     9781 ccgtggcgta gccgaccagc gcgccccaat tgaaggcgag ccccagcacg acctgcggcc
     9841 acgacgtgta acgcttcatg gtcgggtaga tcgccaccag gatcagcgag gcgagcgcca
     9901 cgccgccggc gaacttgttc agcttgaaca ggatggcggc gccgaccagc gactgcagca
     9961 ccatccagat cagcgcattg cgcagtgtca cttcgcccga cggcagcggt cgaccgcgcg
    10021 tgcgctcgac ctgggcgtcg accttgcgat cgacgatgtc gttccaggtg cagcccgcgc
    10081 cgcgcatggc gacggcgccc agcgcgaaca gcgccagcca gccggccagc cgatcccatt
    10141 gcggcgccgc gcccagcgcc agcgaccacc agcagggcag catcagcagc cagatgccga
    10201 tcggccggtc ccagcgcgcc agccggccat agggccgcac ccacggcggc aggtagcgca
    10261 aagaccaatg ccgccggtcg atgtcggtga agccggttgt cctgtcggca gtcatggcgg
    10321 catcatgcag ccatggccgg gcgaactcca tgagcgtgtc gcgtctcttc gtcgaatcag
    10381 atcttttggc gggcggcgag gcgccgctgg gcgaggcaca ggttcactat ctgcgccacg
    10441 tcatgcgccg gcccgatggc gcaccgctct tgctgttcaa cggccgcgac ggcgaatggc
    10501 gcgccacgct agagggccac ggcaagaagg cggccgtggc gcgactgggt gagcgcacgc
    10561 gcgaacaggt cgcggagccc gatgtctggc tgtgctttgc cccggtcaag cgtgcgcgca
    10621 tcgattatat cgccgaaaag gcgaccgagc tcggtgccgc cgtgctgcag ccggtattga
    10681 cgcaacacac caacgtcgag cgcgtgaacg tcgagcggct gcgcgccaat gcgatcgaag
    10741 cggcggagca gaccgaacgg ctcaccgtgc ccgacgtccg cgcgcccgtg gagctcgccc
    10801 gactgctcgc cgactggccg gcg
//
LOCUS       DASWGA010001039         2665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_245970, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001039 DASWGA010000000
VERSION     DASWGA010001039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2665
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245970"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VF991_23745"
     CDS             complement(<1..598)
                     /locus_tag="VF991_23745"
                     /inference="COORDINATES: protein motif:HMM:NF025131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stimulus-sensing domain-containing protein"
                     /protein_id="HEX9559527.1"
                     /translation="MASDIDTATPEPGRRWFGLQGIGSRIAAALGRRGATPARPAESP
                     SLLRRRRSAGRRHSPLTRRILLLNIVPVALLALGAVYLSDYEEELIDAELASLAVQGE
                     MVAAGIAEVAVAGGETTVNRLDADAARQLLTRLVRPTGVRARLFSETGDLLGDSAVLS
                     EAGRIHVIPLPPPEAPPAVEPELGERIGDWIARQLSRAD"
     gene            complement(567..1205)
                     /locus_tag="VF991_23750"
     CDS             complement(567..1205)
                     /locus_tag="VF991_23750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016736180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9559528.1"
                     /translation="MLLEAEGFQIKTYADGASALEGLNQTPPDLGIFDIKMPRMDGME
                     LLNRIRKTQQFPVIFLTSKDEEIDEVLGLRMGADDFIRKPFSQRLLLERIRAVLRRAD
                     AGGAKGEGAAERIVRGELILDPSRHQCTWKGKEVHLTVTEFLLLKSLAERPGHVKNRD
                     QLMDAAYGETIYVDDRTIDSHIKRVRRKFREVDGEFEQIETLYGIGYRYRDS"
     gene            1249..2109
                     /locus_tag="VF991_23755"
     CDS             1249..2109
                     /locus_tag="VF991_23755"
                     /inference="COORDINATES: protein motif:HMM:NF025252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2470 domain-containing protein"
                     /protein_id="HEX9559529.1"
                     /translation="MFLRTAWLLLTGRAAGDGNTDRAVAAAAPICHRCGRIKAFLPRI
                     MTDNVPHDLARVARSLVRGCDRAALATSLPAEAGPWPYASLVLTAVDHDLSPILLLSD
                     LAEHSKAIAGDDRVSLLFDGTEGLDQPLTGPRVTVVGRAGRTADERRRRRFLARHPDA
                     ATYAAFKDFHFYRLSMERAHLVAGFGKIRWLGAAELMAAPPPPGLADAEEGIVSHMNE
                     DHGDALQLYAGKLLGLSGIDWRMTGIDAEGIDLRQGGRVARLTFDTPLQTVSEARKVL
                     VALVAKARAA"
     gene            2329..>2665
                     /locus_tag="VF991_23760"
     CDS             2329..>2665
                     /locus_tag="VF991_23760"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: protein motif:HMM:NF013461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HEX9559530.1"
                     /translation="MKNLNNVHWNLSVPALYEEAIRRGEGCIADGGALAVCTGVHTGR
                     SPNDKFFVEDADSKGRIDWGKTNKPIQPERYRALYNRMLAYAQRRDLFARDCWAGADP
                     AHRIGVRVIT"
BASE COUNT          420 a          878 c          914 g          453 t
ORIGIN      
        1 gatcggcgcg cgacagctgg cgggcgatcc agtcgccgat ccgttcgccc agttcgggct
       61 cgacggcggg cggcgcctcc ggtggcggca gcggtatgac atggatgcgg ccggcctcgc
      121 tcagcaccgc cgagtcgcca agcaggtcgc cggtctcgct gaacagacgg gcgcgcacgc
      181 cggtcgggcg gaccagccgg gtgaggagct ggcgggcggc atcggcatcg aggcggttga
      241 ccgtcgtctc gccgcccgcc acggcgacct cggcgatgcc ggccgcgacc atctcgccct
      301 gcacggcgag cgaggcgagc tcggcgtcga tcaactcctc ctcatagtcg ctgaggtaaa
      361 ccgcgcccaa cgccagcagc gccaccggta cgatgttcag cagcaggatg cggcgcgtca
      421 gcggcgaatg gcgccggccg gcgcttctgc ggcggcgcag cagggagggc gattcagcgg
      481 gccgggcggg cgtggcgcca cggcggccga gcgccgcggc gatccgcgaa ccgatgccct
      541 gcagcccgaa ccagcgccgg ccgggctcag gagtcgcggt atcgatatcc gatgccataa
      601 agcgtttcga tctgctcgaa ctcgccgtcg acctcgcgga acttgcgccg gacccgcttg
      661 atgtggctgt cgatggtgcg gtcgtcgacg tagatcgtct cgccgtaggc ggcgtccatg
      721 agctggtcgc ggttcttgac gtggccgggt cgttcggcca gcgacttcag cagcaggaat
      781 tcggtgaccg tgagatgcac ctccttgccc ttccaggtgc actggtggcg gctcgggtcg
      841 aggatcagct cgccgcgcac gatgcgctcg gccgcccctt cgcccttggc gccgccggcg
      901 tcggcgcggc gcagcacggc gcggatgcgc tcgagcagca ggcgctggga gaacggcttg
      961 cggatgaaat cgtcggcgcc catgcgcagg ccgagcacct cgtcgatctc ctcgtccttg
     1021 gaggtgagga agatcaccgg gaactgctgt gtcttgcgga tccggttcag cagctccatg
     1081 ccgtccatgc gcggcatctt gatgtcgaag atgccgaggt cgggcggagt ctggttgagc
     1141 ccttccagcg ccgaggcgcc gtcggcgtag gtcttgatct ggaagccctc ggcttccagc
     1201 agcattgaca cggaagtgag gatgttgcgg tcgtcgtcga ccagggcgat gttcttgcgc
     1261 acggcttggc ttctcctcac ggggcgggca gcgggtgatg gtaacacaga ccgggccgtt
     1321 gccgccgctg ccccgatctg ccatcgatgt gggcgaatta aggccttttt acctcgaata
     1381 atgaccgata acgtgcccca tgacctggcg cgggtggcgc gcagcctggt gcgcggatgc
     1441 gaccgcgccg ccctggccac cagcctgccc gccgaggccg ggccctggcc ctacgcctcg
     1501 ttggtgctga cggcggtcga tcacgatctt tcgccgatcc tgctgttgag cgatcttgcc
     1561 gaacatagca aggccatcgc tggcgacgac cgggtatcgc tgctgttcga cggcaccgaa
     1621 ggcttggacc agccgttgac cggtccgcgc gttaccgtgg tcggacgcgc cggccggacc
     1681 gccgacgaac gtcggcgccg ccgctttctt gcccgccatc cggacgctgc gacctatgcc
     1741 gccttcaagg acttccactt ctaccggctg tctatggaac gcgcccattt ggtggcaggc
     1801 ttcggcaaga tacgctggct cggcgcggcc gagctgatgg ctgcgccgcc gccgcccggc
     1861 ctcgccgatg ccgaagaggg catcgtcagc cacatgaacg aagaccatgg cgatgccctc
     1921 cagctctatg ccggcaagct gctcggcctg tccggaatcg actggcggat gactgggatc
     1981 gacgccgagg ggatcgatct taggcagggt gggcgcgtgg ctcgcctgac tttcgacacg
     2041 ccattgcaga ccgtcagcga ggcgcgcaag gtgttggtcg ccctcgtggc caaggcgcgg
     2101 gcagcgtgat tccgcgacgc ggcatggtgt tcgcgggtgc aaaatcccgt ccacacgatg
     2161 ttcgacgcta actgtcgcag ggtcttgcca ctccatagcg gccccagtag cgcatagagt
     2221 tgacaccacg cgtcggtcta tcaaggtcta ggatcagccg agaaaagcag gagaaacgct
     2281 gtgcaacagg cgggcttcgt ccccaaactc ggaattgaat cgcttgggtt gaagaactta
     2341 aacaacgttc actggaacct gtcggttccc gcgctctatg aggaggccat ccgccgcggc
     2401 gaaggctgca ttgccgacgg cggcgcgctg gcggtgtgca cgggcgtgca taccggccgc
     2461 tcgcccaacg acaagttctt cgtcgaggat gccgacagca agggccgtat cgactggggc
     2521 aagaccaaca agccgatcca gcccgaacgt tatcgggctc tttacaaccg catgctggcc
     2581 tatgcccagc gccgcgatct gttcgcgcgc gattgctggg ccggcgccga ccccgcgcac
     2641 cggatcggcg tgcgcgtcat caccg
//
LOCUS       DASWGA010001040         2144 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1383832, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001040 DASWGA010000000
VERSION     DASWGA010001040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1383832"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VF991_23765"
     CDS             <1..201
                     /locus_tag="VF991_23765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9559531.1"
                     /translation="LYAFLLLSRETAITLPVALGNFLSADDSPWELLMTAGFIYALPP
                     AAIYYAFRKYMSSGLTAGAVKG"
     gene            complement(198..1331)
                     /locus_tag="VF991_23770"
     CDS             complement(198..1331)
                     /locus_tag="VF991_23770"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9559532.1"
                     /translation="MSRSLFRRPLLAALPLAAALVGRPVRAEGELLKVQKHIFTTKDF
                     KLVSGTVMPEVTIAYETYGTPAPDGRNAVLLTHGYTSSQHMAGRYGEKDGAEGSWDGL
                     VGPGKAIDTDRLFVVSSNMLGSSYGSTNPAFTNPATDKPYGPDFPDITLVDIVNAQKA
                     LLDHLGVKHLVAVAGPSFGGYQTYQWGVSYPDFMDGLVPVVSAPKGSGGEAAVKSLVD
                     FLAKDPNWNGGWYYDKGGIRGILTEMRVATLKRYGIDEQLAGKFPDKAAREAEIVERA
                     GSWAKVFDGNSLVVLRKASVRFDAEKDMARIKAKVLYVLSRTDKLFPPTIAPDVMAKL
                     KAAGVNADYFEIDSDFGHSASGLDAAKWAPRLKGFMATLEKRS"
     gene            complement(1350..>2144)
                     /locus_tag="VF991_23775"
     CDS             complement(1350..>2144)
                     /locus_tag="VF991_23775"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559533.1"
                     /translation="WAFGALGIAGLLWAVLWLIFGREGTLVDPPVSGTAGGGEHVPYR
                     YLLTCPSIVAACCAGFASYWGLALGLTWFTSYLVSGLGYSQQLGGNLTILPWIFGMFV
                     VLGGGWTSQRLKKAGVSSRLCRGAFAASTVVLGGAILLFVSFMPTPELKLALVVVGAA
                     IGSTIYVVLPMIASELTPQPQRAAILAITTSVVTLAGVLAPFAMGAVVQNAATPVAGY
                     ERGYMILGCLLLAGGLIGVLFIRPETDRKRLAAHAVSLPPLQPARA"
BASE COUNT          346 a          721 c          738 g          339 t
ORIGIN      
        1 ctctacgcct tcctgctgct gtcgcgcgag accgccatca ccttgcccgt cgcgctgggc
       61 aatttcctct cggccgacga ttcgccgtgg gaactgttga tgaccgcggg cttcatctac
      121 gcgctgccgc cggcggcgat ctactacgcc ttccgcaagt acatgtcctc cggcctcacc
      181 gccggcgcgg tcaagggcta gctgcgcttc tccagcgtcg ccatgaagcc cttcagccgc
      241 ggcgcccatt tggcggcgtc gaggcccgag gcggagtggc cgaagtcgct gtcgatctcg
      301 aaatagtcgg cgttgacgcc ggcggccttg agcttggcca tgacgtcggg cgcgatggtg
      361 ggcgggaaga gcttgtcggt gcgcgacagc acgtaaagca ccttggcctt gatcctggcc
      421 atgtcctttt cggcatcgaa gcgcaccgag gccttacgca gcacgaccag cgaattgccg
      481 tcgaagacct tggcccagct cccggcgcgc tcgacgattt cagcctcgcg cgccgccttg
      541 tcggggaatt tgccggcgag ctgctcgtcg atgccgtagc gcttgagcgt tgccacccgc
      601 atctcggtca ggatgcccct gattccgcct ttgtcgtagt accagccgcc gttccagttg
      661 gggtccttgg ctaaaaaatc gaccagcgac ttcactgccg cctcgccgcc cgagcccttg
      721 ggcgcgctga ccaccggcac cagcccgtcc atgaaatcgg gatagctcac gccccattgg
      781 taggtctggt agccgccgaa tgacggtccg gcgaccgcga ccagatgctt tacgccgaga
      841 tggtcgagca gggccttctg cgcgttgacg atgtcgacca gcgtgatgtc gggaaagtcc
      901 ggcccatagg gcttgtcggt ggcgggattg gtgaaggcgg gattggtcga gccgtaggac
      961 gagcccagca tgttcgacga cacgacgaac aggcgatcgg tgtcgatcgc cttgcccggc
     1021 ccgaccaggc cgtcccacga tccttcggca ccgtccttct cgccatagcg gccggccatg
     1081 tgctggctcg acgtgtagcc gtgggtcagc aggacggcgt tgcggccgtc cggcgccggg
     1141 gtgccgtagg tctcgtaggc gatcgtgacc tcgggcatca cggtgccgct gacaagtttg
     1201 aaatccttgg tcgtgaagat gtgcttctgg accttcagga gctcgccctc ggcgcggacg
     1261 gggcggccga ccagggctgc ggccagcggc agggcggcga gcagtggacg ccggaagagc
     1321 gaacgggaca tgcggggcct ccttctctgt caggcgcggg cgggctgcag cggcggcaag
     1381 ctgacggcgt gcgccgccag ccgcttgcgg tcggtctcgg ggcggatgaa gagcacgccg
     1441 atcaggccgc cggccagcag caggcagccc aggatcatat agccgcgctc gtagcccgcc
     1501 accggcgtgg cggcgttctg cacgacggcg cccatggcga acggggcgag cacgccggcc
     1561 agcgtcacca ccgaggtcgt gatggcgagt atggcggcgc gctgcggctg gggcgtgagc
     1621 tcgctcgcga tcatcggcag cacgacatag atggtgctgc cgatcgcggc gcccacgacc
     1681 accagcgcaa gcttgagctc gggcgtcggc atgaagctga cgaacagcag gatggcgccg
     1741 cccagcacca ccgtggaagc ggcaaaggcg ccgcggcaga ggcggctcga cacgccggcc
     1801 ttcttcagcc gctgcgaggt ccagccgccg cccagcacca cgaacatgcc gaagatccag
     1861 ggcaggatgg tgaggttgcc gccgagctgc tggctgtagc ccaggccgct caccaggtac
     1921 gaggtgaacc aggtgagccc gagcgccagc ccccagtagc tggcgaaacc cgcgcagcag
     1981 gccgccacga tgctggggca ggtgagcagg tagcggtagg gcacatgctc cccgccgccg
     2041 gccgtgccgc tgaccggcgg atcgaccagg gtgccctcgc ggccgaagat cagccatagc
     2101 acggcccaca acaggccggc gatgcccagc gcgccgaacg ccca
//
LOCUS       DASWGA010001041         8111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1896582, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001041 DASWGA010000000
VERSION     DASWGA010001041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8111
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1896582"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..917
                     /locus_tag="VF991_23780"
     CDS             <1..917
                     /locus_tag="VF991_23780"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX9559534.1"
                     /translation="KGGFTDILYGVGVVPSKLPAIAELRRQGVNLRMVTDNLAVARAI
                     AAAATNGDTFSVLIEIDSGAGRAGLPYPELPGLLDIARVLHNAPGVELAGVMTHAGHS
                     YHQSTPDGIAAVAEQERQAIVGAADKLRAAGIPCPIVSAGSTPTAMHSRDFTGITEMR
                     PGVYVFNDLDQAFIGSCGAGDLALSVLASVIGHYPHRNQVLVDAGALALSKDISAQEF
                     RPEVGYGTIVDPPAKDMAVIACSQEHGFVGADGPIPFGNLPVGSRVRILPNHACITAA
                     AYDRYYVVDSELDGGKSVVDVYDRINGW"
     gene            complement(1029..1796)
                     /locus_tag="VF991_23785"
     CDS             complement(1029..1796)
                     /locus_tag="VF991_23785"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX9559535.1"
                     /translation="MSKRFDLSGKVALVTGASSGLGVHFARTLASAGASVAIAARRAD
                     RLTSLQAELQKAGGKAAAVDLDVQSGKSVSAAFDAIEQALGAIDIVVNNAGISIVKPA
                     LDMPEEDWDAVVDTNLRGAWLVTQTAAKRWVAARRPGVVVNIASILGLRTIGQVAPYN
                     ASKAGLIHLTRALAMEWARYDIRVNAICPGYIETEMNSDFWKTPAGQRLIERIPQRRI
                     GQPEHLDGALLLLASDAGTFMTGSVLTVDGGHTVSSL"
     gene            1857..2618
                     /locus_tag="VF991_23790"
     CDS             1857..2618
                     /locus_tag="VF991_23790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9559536.1"
                     /translation="MDLGLLGKRVLVTGGTKSIGRAIVDAFVAEGAVVGFCARDGKLV
                     KEREKDWQSKQARVAGTALDVTDNAALKKWIDGAASDGGIDHFVANVSALGTEDTEEG
                     WRKAIDIDLVSTVNSVHHVRPHLEKRGLGATLTIIGTVSLVEVAGPTQPYRSVKAALV
                     PFVKSLAIDMAAKGVRANMVSPGTILEDGNTWGRQRDAGAERYKRMLARNPMGRMGTP
                     QEVAAAVVFLAGTPASFVTGANFIVDGAITARVQY"
     gene            2684..3829
                     /locus_tag="VF991_23795"
     CDS             2684..3829
                     /locus_tag="VF991_23795"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559537.1"
                     /translation="MVAAFHVGKVPPSIPSIREELGASLGQAGWLLSTVSLITALGGM
                     AIALTADRFGHRRLVMLGTALCCVASLLGAFAPTVDALLVGRVFEGLGFIAVVVAIPT
                     LLLRIAAPADQRLAMILWTSYMPAGAGAMMLIAAVILPGTSWRAAWLVAAGVSALMLA
                     ALLLRALPRHELDPQPVKRRPVAHEMAEVASSGGPLAIALCFGAYSCCWYAVVGFLPT
                     LQIERLGFDISTAAIVTALVTMVNVGGNLAAGWLLRHGWPRVVIIVGTTISMAFCAAG
                     IFIDSVPDLLRLVLAGVYSMVIGAVPGALFTAIPVHTPRPELVGASTGLLMQGSNMGA
                     LLGPPITGALVAAGGWQSAAWLTSTALGVAAAAGLFLHWRERRKLSP"
     gene            3826..4485
                     /locus_tag="VF991_23800"
     CDS             3826..4485
                     /locus_tag="VF991_23800"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEX9559538.1"
                     /translation="MIYVDIVSDTICPWCYIGKRRFERALALSGRSDVAVAWRPFQLN
                     PDMPAEGMTRDDYVRAKFGGGDRPRQIYQAIAESGREAGIEFQFARIRRTPNTVLSHR
                     LVHWGAKNELQDEIVAELFKAYFEQGLDIGDVEILVECARRAGIDEETARRYLASDEG
                     RQEVVASDVYARRLGINGVPCFIVNRKYAVSGAQPPSAFVEVFNLAERDAATSAAQST
                     A"
     gene            complement(4495..7851)
                     /gene="mfd"
                     /locus_tag="VF991_23805"
     CDS             complement(4495..7851)
                     /gene="mfd"
                     /locus_tag="VF991_23805"
                     /inference="COORDINATES: protein motif:HMM:TIGR00580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEX9559539.1"
                     /translation="MARDGQRLERLQDGLRFFAPEREVLVFPAWDCLPYDRLSPHPDI
                     VAERLETLARLAAPKRPATPARIVLASVGAALQKVPPRSLYAEAAVVLRKGQTLDLAW
                     LTRFLGENGYGRSETVMEPGEFAMRGGLLDLFPPGTSEPLRLDLFGDTLEAIRSFDAM
                     SQRSTGTREEVVLLPVSEVLLTKESIARFRGGYRELFGNVAGDDILYEAVSAGQRHVG
                     MEHWLPLFHERLETLLDYCPEAIITADHQIGEALQARHELITDYYDARRKTGGKGGMS
                     GAADYKPVPPERLYLKPSEWDRLLEGHVVAQFTTFDAAPDTPNAIDLHGRRHEGFAQA
                     RTAQGVNLFDEVANHVKAANAAGRRVVIAGYTEGSASRLQHLLQEHGATTPVPVPDHA
                     TVLGLPPGVVGVAVWSLDHGFVLDGLEVIGEEDILGDRLSRPAKKRRPSERFIAEAAA
                     LSDGDLVVHREHGVGRYEGLITIEIQNARHDCLRLTYEGGDKLFVPVENIDVLSRYGA
                     GEEGAPLDRLGGVAWQSRKARLKQRIADMADRLIKIAAERAIRRGETMSPPEGAYEEF
                     CARFPYAETDDQLQAIADVLDDMSSGKPMDRLICGDVGFGKTEVALRAAFVAALAGKQ
                     VAVIGPTTLLARQHHRTFLERFQGFAVKIGRLSRLVGAKEAKATKQAMKDGTLDIVVG
                     THALLAKSVEFKDLGLLIVDEEQHFGVAHKERLKELRADVHVLTLTATPIPRTLQLAL
                     TGVRDMSLIATPPVDRLAVRTFVTPFDGVTIREALLREQYRGGQSFYVCPRIEDLAQV
                     ATDLRELVPEIRMAMAHGRLTPTTIENAMQDFVDGKFDVLLSTNIVESGLDISNANTM
                     VIHRADMFGLAQLYQLRGRIGRGKTRAYAYLTVPPGRALNEAASKRLEVMQTLDTLGA
                     GFQLASHDLDIRGAGNLLGEEQSGHIREVGIELYQQLLEEAVAAARGRAHEAEQAEWS
                     PQLNLGIPVLIPEEYVADLSVRMGLYRRIGALANQADIDSFAAELVDRFGKMPPEAEF
                     LLNTVALKLLCRAAGVDRIDAGEKAVVLSLHDNKFARPDKLIAWLQKNAPLVRLRPDH
                     RVIVQRVWNDERQRLSGVTSIVSSLARLAA"
     gene            7912..>8111
                     /locus_tag="VF991_23810"
     CDS             7912..>8111
                     /locus_tag="VF991_23810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559540.1"
                     /translation="MASLSEILAAIHRKPGRWTVAGLPEGADSLALAELARTTGGQDI
                     LHVARDGQRLERLQDGLRFFAP"
BASE COUNT         1228 a         2813 c         2730 g         1340 t
ORIGIN      
        1 ccaagggcgg cttcaccgac atcctctatg gcgtgggcgt cgtgccgtcc aagctgccgg
       61 ccatcgctga gctgcgccgt cagggcgtca acctgcggat ggtgacggac aatctcgccg
      121 tcgcccgggc gattgccgcc gcggcgacca acggcgacac cttctcggtg ctgatcgaga
      181 tcgacagcgg cgccggccgc gccggcctgc cttaccctga gctgcccggc ctcctcgata
      241 tcgcccgtgt cttgcacaac gcgcccggcg tagagctggc gggcgtcatg acccatgccg
      301 gccactccta tcatcagagc acgcccgacg gcattgccgc cgtggccgag caggagcgcc
      361 aggcgatcgt cggtgcggcc gacaagctgc gcgccgccgg catcccctgc cccatcgtct
      421 cggccggctc gacgccgacg gccatgcact cgcgcgactt caccggcatc accgagatgc
      481 ggcccggcgt ctatgtcttc aacgacctcg accaggcgtt catcggctcg tgcggcgcgg
      541 gcgatcttgc gctctcggtg ctggcctcgg tgatcggcca ctatccgcac cgcaaccagg
      601 tgctggtcga tgccggggcg ctggcgctgt ccaaggacat cagcgcccag gagttccggc
      661 ccgaggtcgg ctacggcacc atcgtcgatc caccggccaa ggacatggcc gtgatcgcct
      721 gctcgcagga gcatggcttc gtcggcgccg acgggccgat tccgttcggc aacctgccgg
      781 tcggctcgcg ggtgcgcatc ctgcccaacc acgcctgcat caccgccgcg gcctacgacc
      841 gctactacgt ggtcgacagc gagctcgacg gcggcaagtc ggtggtcgat gtctacgacc
      901 gcatcaatgg ttggtagcct gtggcctcaa aggtccctcg ggcttcgccc tcgggatgac
      961 agggtgcgtt gatcccaaag cacctgtcat cccgagcgca gcgagggacc tttcgttggc
     1021 cttgcaacct acaacgaact caccgtatgc ccaccgtcga cggtgagcac gctgccagtc
     1081 atgaaggtgc cggcgtcgga ggccagcagc agcagcgcgc cgtcgagatg ctcgggctgg
     1141 ccgatgcgcc gttgcgggat gcgctcgatc aggcgctggc cggcgggcgt cttccagaaa
     1201 tcgctgttca tctcggtctc gatgtagccc gggcagatcg cgttgacccg gatgtcgtag
     1261 cgcgcccatt ccatggcgag cgcacgggtg agatggatga ggcccgcctt cgaggcgttg
     1321 tagggtgcca cctggccgat ggtgcgcagg cccaggatcg aggcgatgtt gacgaccacg
     1381 cccggccgcc tggccgccac ccagcgcttg gccgccgtct gcgtcaccag ccaggcgccg
     1441 cgcaggttgg tgtcgacgac ggcgtcccaa tcctcttccg gcatgtcgag cgcgggcttg
     1501 acgatggaaa tgccggcatt gttgaccacg atgtcaatcg cgcccagtgc ctgctcgatg
     1561 gcatcgaacg ccgcgctcac cgatttaccg gactgcacat cgagatctac cgccgcagcc
     1621 ttaccgccgg ccttctgcag ttccgcctgt agagaggtaa gacggtcggc gcgacgggcc
     1681 gcgattgcga ccgatgcgcc ggccgacgcc agcgtgcgcg cgaaatgaac gccgagcccc
     1741 gacgacgcgc cggtcaccag ggccaccttg cctgaaaggt cgaatcgctt ggacatcgca
     1801 ggcgctcccc tgtttcatgc ccgccttatt agcggagcgg cgcttcggga ggaaacatgg
     1861 acctcggtct tctaggcaaa cgcgttctgg tcaccggcgg caccaagagc atcggccgcg
     1921 ccatcgtcga tgccttcgtg gctgaaggcg ccgtcgtggg cttctgcgcg cgcgatggca
     1981 agctggtgaa ggagcgcgag aaggactggc agtccaagca ggcgcgcgtc gccggcacgg
     2041 cgctcgacgt caccgacaat gcagcgctca agaaatggat cgacggcgcc gccagtgacg
     2101 gcggcatcga tcatttcgtc gccaatgtga gcgcgcttgg caccgaggac acggaggaag
     2161 gctggcgcaa ggccatcgac atcgacctgg tatcgacggt gaactccgtc caccacgtcc
     2221 gaccgcacct cgagaagcgc ggcctgggcg ccacgctgac gatcatcgga acggtgtcgc
     2281 tggtcgaagt cgcgggtccc acccagccct accgttcggt caaggcggcc ctggtgccgt
     2341 tcgtaaaatc gctcgccatc gacatggcgg ccaagggcgt gcgcgccaac atggtatcgc
     2401 ccggcaccat cctggaggac ggcaacacct ggggccgcca gcgcgacgcc ggcgccgagc
     2461 gctataagcg catgctggcg cgcaatccga tgggccgcat gggcacgcca caggaagtgg
     2521 cggccgccgt cgtgttcctg gccggcacgc cggcctcgtt cgtgaccggc gccaacttca
     2581 tcgtcgacgg cgccatcacg gcacgggtgc agtactgacc ccagagaccc atagagcatc
     2641 gcgcacgccc tgggcgctgg tcggcctgct ggtcgccgcc ggcatcgtcg cggcgttcca
     2701 tgtcggcaag gtgccgccgt cgatcccgtc gatccgcgag gaactgggcg cgagtctcgg
     2761 ccaggccggc tggctgctgt ccacggtcag cctgatcacc gcactgggcg gcatggcgat
     2821 cgcgctcacc gccgatcgct tcggccaccg ccggctggtg atgctgggca ccgcgctctg
     2881 ctgcgtggcg agccttttgg gcgccttcgc cccaaccgtc gacgccctgc tggtcggaag
     2941 ggtcttcgaa gggctgggct tcatcgccgt cgtggtcgcc atcccgaccc tgctgctgcg
     3001 cattgcggct cccgccgacc agcgcctggc gatgatcctg tggacctcct acatgccggc
     3061 cggtgccggc gcgatgatgc ttatagcggc cgtcatcctg cccggcacgt cgtggcgcgc
     3121 ggcctggctg gtcgcggccg gggtctcggc gctcatgctc gcggcgctgt tgctgcgcgc
     3181 cctgccgcgg cacgaactcg atccgcagcc ggtgaaacgc cggccggtcg cccatgaaat
     3241 ggcagaggtc gcgtcgagcg gcggaccgct cgccatcgcg ctttgcttcg gcgcctattc
     3301 ctgctgctgg tacgccgtcg tgggctttct gccgaccctg cagatcgagc gcctgggctt
     3361 cgacatctcg accgccgcca tcgtgacggc gctggtcacc atggtgaatg tcggcggcaa
     3421 cctcgcggcc ggctggctgc tgcgacatgg ctggccgcgg gtcgtgatca tcgtcggcac
     3481 cacgatctcg atggcgttct gtgccgccgg aatcttcatc gatagcgtgc ccgacctgct
     3541 gcggctggtg ctggcgggag tctattcgat ggtgatcggc gccgttcccg gcgcgctgtt
     3601 cacggccatc cccgtgcata cgccgcggcc ggagctggtc ggcgcctcga ccggcttgct
     3661 gatgcaaggc tccaacatgg gcgccctgct cggcccgccg atcaccggcg cgctggttgc
     3721 ggccggcggc tggcagtctg ctgcatggct gacatccacc gcactcgggg tcgccgcggc
     3781 ggccggtctc ttcctgcact ggcgcgaacg gcgtaaactc agcccatgat ttatgtcgac
     3841 atcgtttccg acacgatctg cccgtggtgc tacatcggca agcggcgctt cgagcgcgcg
     3901 ctggcgctga gcggccgcag cgacgtcgcc gtggcgtggc gtcccttcca gctcaatccc
     3961 gacatgccgg ccgaaggcat gacgcgcgac gactacgtgc gcgccaagtt cggcggcggc
     4021 gaccggccgc gccagatcta ccaggcgatc gccgaaagcg gccgcgaggc cggcatcgaa
     4081 ttccagttcg cgcgcatccg ccgcacgccc aacaccgtgc tgtcgcaccg gctggtccat
     4141 tggggcgcca agaacgagct gcaggacgag atcgtggccg agctgttcaa ggcttatttc
     4201 gagcaaggcc tcgacatcgg cgatgtcgag atcctggtcg aatgcgcccg ccgcgccggc
     4261 atcgacgagg agaccgcgcg ccgctacctc gcgagcgacg agggccgcca ggaggtcgtg
     4321 gcctccgacg tctatgcgag acggctcggc atcaacggcg tgccctgctt catcgtcaac
     4381 cgcaagtacg ccgtctccgg cgcccagccg ccctcggcct tcgtcgaggt cttcaacctc
     4441 gccgaacgcg acgccgccac aagcgcggcg caatccacgg cttaacaccg ctcctcaagc
     4501 cgcaagcctc gccagcgagg agacgatcga ggtcacgccg gaaagccgct ggcgctcgtc
     4561 gttccagacg cgctgcacga tcacacggtg gtcgggccgc agccgcacca aaggcgcgtt
     4621 cttctgcagc caggcgatga gcttgtccgg ccgggcaaac ttgttgtcgt gcagcgacaa
     4681 cacgaccgcc ttctcgccgg cgtcgatgcg gtcgactccg gccgcccggc agagcagttt
     4741 cagcgccacg gtgttcagca ggaactcggc ctccggcggc atcttgccga agcggtcgac
     4801 aagctcggcg gcgaaggaat cgatgtcggc ctggttggcc agcgcgccga tgcggcggta
     4861 gaggcccatg cgcaccgaca ggtcggcgac gtactcctcg gggatcagca cggggatgcc
     4921 gagattgagc tgcggcgacc actcggcctg ctcggcctcg tgcgcccggc cgcgtgccgc
     4981 ggcaaccgct tcttcgagga gctgctggta gagctctatg ccgacctcgc ggatgtggcc
     5041 ggactgctct tcgcctagaa ggttgccggc gccgcggatg tcgaggtcgt ggctggcgag
     5101 ctggaagccc gcgcccaaag tgtcgagggt ctgcatcacc tcgagccgct tggacgccgc
     5161 ctcgttcagc gcccggccgg gcggcaccgt gagataggca taggcccgcg tcttgccgcg
     5221 gccgatgcgg ccccggagct ggtagagctg ggccaggccg aacatgtcgg cgcgatggat
     5281 caccatggtg ttggcattgc tgatgtcgag ccccgactcg acgatgttgg tcgacaagag
     5341 cacgtcgaac ttgccgtcga cgaaatcctg catggcgttc tcgatggtgg tcggcgtcag
     5401 ccggccgtgc gccatggcca tgcggatctc cggcaccagc tcgcgcaggt cggtcgcgac
     5461 ctgggccagg tcctcgatgc gcggacagac atagaagctc tggccgccgc gatattgttc
     5521 gcgcaacaag gcctctcgta tcgtgacgcc gtcgaatggc gtgacgaacg tgcgcaccgc
     5581 caggcgatcg accggcggcg tggcgatcag gctcatgtcg cgcaccccgg tcagggcaag
     5641 ctgcagggtg cgcgggatcg gcgtcgccgt cagggtcagc acatggacgt cggcgcgcag
     5701 ctccttcagg cgttccttgt gggcgacgcc gaaatgctgc tcctcgtcga cgatcaagag
     5761 cccgaggtcc ttgaactcga cgctcttggc caggagcgca tgggtgccga ccacgatgtc
     5821 gagcgtgccg tccttcatcg cctgcttggt ggccttggct tccttggcgc cgaccagccg
     5881 cgacagccgg ccgatcttca ccgcaaagcc ctggaagcgc tcgaggaagg tgcgatgatg
     5941 ctggcgcgct aaaagcgtcg tgggcccgat caccgccacc tgcttgccgg ccagcgcggc
     6001 gacgaaagcc gcgcgcagtg ccacctcggt cttgccgaaa ccgacatcgc cgcagatcag
     6061 acgatccatc ggcttgcccg acgacatgtc atccaacacg tcggcgatgg cctggagctg
     6121 atcgtcggtc tcggcatagg ggaagcgggc gcagaattcc tcgtaggcgc cttccggcgg
     6181 gctcatcgtc tcgccgcggc ggatggcgcg ctcggccgcg atcttgatca gccggtcggc
     6241 catgtcggcg atgcgctgct tcagccgcgc cttgcgcgac tgccaggcga cgccgcccag
     6301 gcggtcgagc ggagcgccct cctcgcccgc gccgtagcgg ctcagcacgt cgatgttctc
     6361 gaccggcacg aacagcttgt cgccgccctc gtaggtgaga cgcaggcaat cgtggcgcgc
     6421 gttctggatc tcgatggtta tgagtccttc gtagcggccg acgccgtgct cgcgatgcac
     6481 gaccaggtcg ccgtcgctga gcgccgccgc ctcggcaatg aagcgctccg acggccggcg
     6541 cttcttggcc ggccgcgaca ggcggtcgcc taaaatgtcc tcctcgccga tgacttcgag
     6601 tccgtccagc acgaagccgt ggtcgagcga ccagacggcg acgccgacta cgccgggcgg
     6661 caagccgagc accgtcgcat ggtcgggcac ggggaccggc gtcgtcgcgc catgctcctg
     6721 caggagatgt tgcaggcggc tcgccgaacc ctcggtgtag cctgcaatga caacgcgccg
     6781 tccagccgcg ttggcggcct tcacatgatt ggccacttca tcgaacaggt tgacgccctg
     6841 tgccgttctc gcctgggcaa agccttcgtg acggcggccg tgcaggtcga tggcgttcgg
     6901 cgtgtcgggc gccgcatcga aggtcgtgaa ctgcgccacg acatggccct cgagcaggcg
     6961 atcccattcc gagggtttga ggtagagccg ttcgggcggc accggcttgt agtcggcggc
     7021 gccgctcatg ccgcccttgc cgccggtctt gcggcgggcg tcgtagtagt cggtgatcag
     7081 ctcgtgacgg gcctgcaagg cctcgccgat ctggtggtcg gcggtgatga tcgcctcggg
     7141 acaatagtcg agcaacgtct ccaggcgttc atggaacagc ggcagccaat gctccatgcc
     7201 gacatggcgt tggccggccg acaccgcctc atagaggatg tcgtcacctg ccacattgcc
     7261 gaacagctcg cggtagccgc cccggaaacg cgcgatgctc tccttggtca gcagcacctc
     7321 gctgaccggc agcagcacga cctcctcgcg ggtgccggtc gagcgctggc tcatggcgtc
     7381 gaacgagcgg atcgcctcga gcgtgtcgcc gaacaggtcg agccgcagcg gctccgatgt
     7441 gccgggtgga aagagatcga gcaggccgcc gcgcatggcg aactcgcccg gctccatcac
     7501 ggtttccgag cggccataac cgttttcgcc caaaaacctg gtcagccagg cgaggtcgag
     7561 ggtctggccc ttgcgcagca ccaccgctgc ctcggcataa aggctgcgcg gcggcacttt
     7621 ctgcagcgcc gcccccaccg atgccagcac gatgcgcgcc ggcgttgcgg gccttttagg
     7681 cgcggccagc cgcgccaggg tttccagccg ctcggccacg atgtcgggat gcggcgacag
     7741 gcggtcgtag ggcaggcaat cccaggccgg gaagaccagg acctcgcgct cgggcgcgaa
     7801 gaagcgcagc ccgtcctgca ggcgctccag ccgctggccg tcgcgcgcca cgtgcaggat
     7861 gtcctgcccg ccggtgctgc gccggctttt ggcgtttcgc gtgaggttct agtggcgtcg
     7921 ctttccgaaa tcctcgccgc catccaccgc aagcccggcc gctggacggt cgccggcttg
     7981 ccggagggcg ccgattcgct ggcgctcgcc gagctggcgc gcaccaccgg cgggcaagac
     8041 atcctgcatg tggcgcgcga cggccagcgg ctggagcgcc tgcaggacgg cctgcgtttc
     8101 ttcgcgcccg a
//
LOCUS       DASWGA010001042         4721 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_365767, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001042 DASWGA010000000
VERSION     DASWGA010001042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4721
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365767"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VF991_23815"
     CDS             complement(<1..465)
                     /locus_tag="VF991_23815"
                     /inference="COORDINATES: protein motif:HMM:NF039586.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559541.1"
                     /translation="MSAIRRGLSGRVAAGSLAVLAILAGAATYAWLAGFAPTSFNTRG
                     WIIGLLVADLVVAVALVALLAMRLTQLLLDRRRGAAGSRLHMRLVLVCSVFTITPTLI
                     VAIIMSFVVLNLTDFVVKPAQASYEAARAIGEPVRQAREEEIIRDIGAIAGPL"
     gene            complement(509..1984)
                     /gene="ntrC"
                     /locus_tag="VF991_23820"
     CDS             complement(509..1984)
                     /gene="ntrC"
                     /locus_tag="VF991_23820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HEX9559542.1"
                     /translation="MTSSSTILVADDDRAIRTVLHQALGRQGHNVRSTGTAATLWQWV
                     QEGEGQLVITDVVMPDENGLDLVPRIRKLRPDLRIIVMSAQSTLLTAVRATERGAFEY
                     LPKPFDLNELISVVNRALSAPATLLQRNAHPPDEGERLPLIGRSPAMQEIYRALARLM
                     STDLTVMVTGESGAGKELVARALHDYGKRRKGPFVALNMAAIPRELIESELFGHERGA
                     FTGAVQRSAGKFEQASGGTLFLDEIGDMPPEAQTRLLRVLQEGEYMTVGGRTPIKANV
                     RIVAATHRDLRRLIQQGLFREDLFYRLNVVPIRLPPLRERLDDIPELANHFLRAATAD
                     GLPAKVLSPEAMARLKQHRWPGNVRELVNLVRRLSALYSEEVIGVETIEAELADAVSA
                     IDPGPQADATTAAVSLADAVDRHLQVLFASHGDRLPPDGMYDRVISEVERPLLSLALG
                     ATRGNQLRAARLLGLNRNTLRKKIKDLDVPVVRTPQVRRGG"
     gene            complement(1981..3093)
                     /locus_tag="VF991_23825"
     CDS             complement(1981..3093)
                     /locus_tag="VF991_23825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9559543.1"
                     /translation="MTLHPLKRSSALDDQFPTAILDSLSEAIAVVDAGGLIQYANLSA
                     EQFFGVGRARLVGHPLNEFVPEDTPLFSLLEQVLSTGGAVAENGVTLASPRIGNRFCA
                     LRLSPIVDSDGLVAVSLVEQTIARNIDRQMSHRSAARSVSALAAMLAHEVKNPLSGIR
                     GAAQLLEQSVPDSERELISLICEETDRIVALVDRMEAFADGRPIERGPINIHQVLNHV
                     RRISQNGFGKGVRFVETYDPSLPDVHGDRDQLIQVFLNLVKNACEVPGDGEREIELST
                     AFRHGLRLAVPGQQAKVNLPLVVSVRDNGRGVSDEIRAHLFDAFVTNKPTGTGLGLAL
                     VAKIINDHGGAIEFESEPGRTTFRVMLPLQIRLAAP"
     gene            complement(3095..4102)
                     /gene="dusB"
                     /locus_tag="VF991_23830"
     CDS             complement(3095..4102)
                     /gene="dusB"
                     /locus_tag="VF991_23830"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEX9559544.1"
                     /translation="MDCTRRLQPLDIGPVRLQDPVILAPMSGVTDMPFRRMVKRGGAG
                     LVVSEMIASAAMVRENRKTLLMAKNSPEEFPMSVQLAGCEPEVMAEAAKLNEDRGAAV
                     IDINFGCPVKKVVNGHAGSSLMRDEVHAAKILEATVNAVKLPVTLKMRTGWDANNRNA
                     PSLARIAEQCGIRMLTVHGRTRCQFYDGHADWAFVAQVRAATKLPVIVNGDIDTLDDV
                     DTALEQSGADGVMIGRGAYGRPWFLNQAIHYLRTGQRLADPSLAEQYAIVRSHFEAML
                     SHYGRETGVRMARKHLGWYSKGLPASAEFRAAVNRETDPNNVRNILASFFLPALERQA
                     A"
     gene            4228..>4721
                     /locus_tag="VF991_23835"
     CDS             4228..>4721
                     /locus_tag="VF991_23835"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070567 - cytidylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IspD/TarI family cytidylyltransferase"
                     /protein_id="HEX9559545.1"
                     /translation="MPTCIALIVAGGRGSRFGGPLPKQYAVLDGHPVLRHTIRVFRQT
                     PGIDQVQVVIAPGDETHYRTAAVGFDLPPPVEGGGSRQQSVLNGLEALAAAAPDLVAI
                     HDAARPFVRPADIAACLKALAAPGIDGAVLGVPLADTLKRVDESGAISQTVPRAALWR
                     AQTP"
BASE COUNT          804 a         1551 c         1599 g          767 t
ORIGIN      
        1 cagggggccg gcaatggcgc cgatatcgcg tatgatctcc tcctcgcgcg cctgtcgcac
       61 cggctcgccg atcgcccgcg ccgcttcgta cgaggcttgg gcgggcttca ccacgaagtc
      121 cgtcaggttg aggaccacga acgacatgat gatcgccacg atcagcgtgg gcgtgatggt
      181 gaagacgctg cataccagca cgaggcgcat gtgaaggcgc gaacccgcgg cgccgcgccg
      241 gcgatcgagc aagagttgcg tcaggcgcat cgcgagcagc gcgaccagcg ccaccgcgac
      301 cacgaggtcg gccaccagca gcccgatgat ccagccgcgg gtattgaagg aggttggggc
      361 gaatcccgcc agccaggcgt aggtggcggc accggcaagg atggcgagca cggccagcga
      421 gcctgccgcg acgcggccgc ttagcccgcg gcggatcgcg ctcatccaat cgcccaagcg
      481 tggaacgccc agcgcagctg tcactagatc acccgcctcg gcgaacctgc ggcgtacgca
      541 ccacggggac gtcaaggtcc tttatcttct tgcgcaacgt attgcgattg agccccagga
      601 ggcgggcggc gcgcaactga ttcccgcgcg ttgccccaag ggccaaggac aagagcggcc
      661 gttcgacctc ggaaatgaca cgatcgtaca tgccgtccgg cggcaggcgg tcgccatggg
      721 aggcaaaaag cacctgcaaa tgccggtcga cggcgtcggc cagggagacg gcggcggtcg
      781 tggcgtcagc ctggggtccg gggtcgatgg cggaaaccgc gtcggccaac tccgcttcga
      841 tcgtctcgac gccgatcacc tcttccgagt aaagcgccga cagccggcgc accaggttga
      901 ccagttcgcg gacgttgccc ggccaacgat gctgcttcaa gcgcgccatc gcctccggcg
      961 aaagcacctt tgccggaagc ccgtcggcgg tcgccgcccg cagaaagtgg ttggcgagct
     1021 cggggatgtc gtcgagccgc tcgcgcagcg gtggcaggcg gatcggcacc acgttcaggc
     1081 gatagaacaa gtcctcgcgg aacaggccct gctggatcag ccgccgcagg tcgcgatgcg
     1141 tggccgcgac gatgcgcacg ttggccttga tcggcgtccg cccgccgacc gtcatgtact
     1201 cgccttcctg caggacgcgc agcaggcggg tctgcgcctc gggcggcatg tcgccgatct
     1261 cgtcgaggaa cagcgtgccg ccggacgcct gctcgaactt gccggccgag cgctggacgg
     1321 cgccggtgaa agcaccgcgc tcgtggccga acagctcgct ttcgatcagc tcgcgcggga
     1381 tcgccgccat gttgagggcg acgaaaggac ctttgcggcg cttgccgtaa tcgtgcagcg
     1441 cgcgcgccac cagctccttg ccggcgcccg attcgccggt gaccatcacc gtgaggtcgg
     1501 tcgacatcag gcgcgccagg gcgcggtaga tctcctgcat cgccggcgag cggccgatca
     1561 agggcaggcg ctcgccctcg tccggcggat gcgcgttgcg ctgcagcaat gtggccggcg
     1621 ccgacagcgc gcggttcacc accgagatca attcgttgag gtcgaacggc ttgggcagat
     1681 attcgaaggc gccgcgctcg gtggcgcgca ccgccgtaag cagggtcgac tgcgcgctca
     1741 tgacgatgat gcggagatca ggtcgcagct tgcggatgcg cggcaccaga tcgaggccgt
     1801 tctcgtcagg cattaccacg tcggtgatga cgagctggcc ctcgccttcc tggacccact
     1861 gccataacgt ggccgccgtg ccggtgctgc ggacattgtg gccttggcga cccagcgcct
     1921 ggtgcaggac cgtacggatg gcccgatcgt cgtcggcgac caggatggtg ctggaactcg
     1981 tcatggggcg gccaggcgga tttgcaacgg caacatcact cggaaggtcg tgcggccggg
     2041 ctcgctctcg aactcgatgg ccccgccgtg gtcgttgatg atcttggcca ccaatgcaag
     2101 acccaggccg gttccggtcg gcttgtttgt cacgaaagcg tcaaacaggt gggcgcggat
     2161 ctcgtcggac acgccgcggc cattgtcgcg caccgagacg accaggggca ggttgacctt
     2221 ggcttgctgg ccggggacgg ccagacgcag gccgtggcga aaagctgtgg acaactcgat
     2281 ctcgcgctcg ccatcgcccg gcacctcgca ggcatttttc accaggttca ggaaaacctg
     2341 gatgagctgg tcgcggtcgc cgtggacatc cggcagcgac ggatcgtagg tctcgacgaa
     2401 gcgcacgccc ttgccgaagc cgttctggga aatgcgacgc acgtgattga gcacctgatg
     2461 gatgttgatc gggccgcgct cgataggccg gccatcggcg aacgcctcca tgcggtcgac
     2521 cagcgccacg atgcgatcgg tctcctcgca gatcaggctg atcagttcgc gctcggagtc
     2581 gggcaccgac tgctcgagca actgggcggc gccgcggatg cccgacaggg gatttttgac
     2641 ctcgtgcgcc agcatggccg ccagcgcgct caccgagcgg gcggcgctgc gatgcgacat
     2701 ctggcggtcg atgttgcgcg cgatcgtctg ctcgaccagc gacaccgcga ccagaccatc
     2761 gctgtcgacg atcggcgata ggcggagcgc acagaaccgg ttgccgatgc gcggcgaagc
     2821 aagcgtgacg ccgttctcgg ccaccgcgcc gccggtcgac agcacctgct ccagcaggga
     2881 gaacagcggc gtgtcctccg gcacgaactc gttcaacgga tggccaacga gccgcgcccg
     2941 gccgacgccg aagaactgct cggccgaaag gttggcgtat tggatgagcc cgccggcgtc
     3001 gaccactgcg atcgcctccg aaagcgagtc gagaatcgcc gtcggaaatt ggtcgtcgag
     3061 cgcgctcgac cgcttgagag gatgaagcgt catgctaggc ggcctgccgt tcgagcgcgg
     3121 gcagaaagaa cgacgccagg atgttgcgga cgttgtttgg atcggtttcg cggttgaccg
     3181 cggcgcggaa ctcggccgag gccggcaagc ccttggaata ccatcccaaa tgcttgcggg
     3241 ccatgcgcac gcccgtctct cggccgtagt gcgacagcat cgcttcgaaa tggctgcgca
     3301 cgatggcgta ctgctcggcc agcgacgggt cggcgaggcg ctgcccggtt cggagatagt
     3361 ggatcgcctg attgaggaac cacggccggc cataggcgcc gcgaccgatc atgacgccgt
     3421 cggcgcccga ctgttcgagt gccgtgtcga cgtcgtcgag cgtatcgatg tcgccgttga
     3481 cgatgaccgg cagcttggtc gccgccctca cctgggcgac gaacgcccaa tcggcgtgac
     3541 cgtcatagaa ctggcagcgc gtgcggccgt gcaccgtcag catcctgatg ccgcactgct
     3601 cggcgatacg cgcgaggctg ggggcgttgc gattgttggc atcccagccc gtgcgcatct
     3661 tgagcgtcac cggcagcttc acggcgttga cggtcgcttc gaggatcttc gccgcatgca
     3721 cctcgtcgcg catcagcgag gagccggcgt ggccgttcac gaccttcttc accggacagc
     3781 cgaaattgat gtcgatgacg gccgccccac ggtcttcgtt cagcttggcg gcctcggcca
     3841 tcacctcggg ttcgcagccc gcgagctgga ccgacatggg gaactcttcc ggcgagtttt
     3901 tggccatcaa cagcgtcttg cggttctcgc gaaccatcgc cgccgaggcg atcatctcgg
     3961 acacgacaag gcctgccccg ccccgtttca ccatccggcg aaatggcatg tcggtcacac
     4021 ccgacatcgg cgccaggatc acgggatcct ggaggcggac gggaccgata tcgagcggtt
     4081 gaagacggcg tgtgcagtcc atgtcgtttg atcagtaatt aggcatcttg tgcagtgcac
     4141 aataattgag cgagcaatag cgggtccagg cggcccatgc aagggtccga agtgcgcacc
     4201 ccctaagcca atgttattca acccatcgtg ccgacttgta tcgccctgat cgttgccggg
     4261 ggtcggggca gccgcttcgg cggccccctg cccaagcaat atgccgtgct cgatggacac
     4321 ccggtcctgc gccatacaat cagggtcttc cgccagacgc cggggatcga tcaggtccag
     4381 gtcgtgatcg cgccgggcga cgaaacgcac tatcggacag cggctgtggg tttcgatctg
     4441 ccgcctccgg tcgagggcgg cggcagtcgc cagcaatcgg tgttgaacgg cctggaagcg
     4501 ctggcggccg cggcgccgga cctggtagcc attcacgatg ccgcccgccc tttcgtccgg
     4561 ccagccgaca tcgccgcttg cctaaaagcc ctggcagcgc ccggtatcga cggcgcagtc
     4621 ctcggtgtcc cgcttgccga tacgctgaag cgggtcgacg aaagcggcgc catttcgcag
     4681 accgtgccgc gggccgcgct gtggcgggcg cagacgccgc a
//
LOCUS       DASWGA010001043         4888 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2404514, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001043 DASWGA010000000
VERSION     DASWGA010001043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4888
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2404514"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1060
                     /locus_tag="VF991_23840"
     CDS             <1..1060
                     /locus_tag="VF991_23840"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559546.1"
                     /translation="TLISPLFGMAGDRIGNRNLLCLMRATYVAVAAALAVLFVADLAT
                     PVPVFVLATIMGLVRPSDITLRTLLVGETMPADYLMRAMGVSRTTADSARIVGALSGA
                     GLVAILGSGIAYAAVCAVYAVSLVLTLNVGVRRVRVVGKAVAGSPMRALGQGFAYVWS
                     TPDMRALMLLAFLVNFAAYPLVGSLLAYVAKDIYGLGQTGLGWLIACFAAGALAGSIA
                     ISTHGALIRPARTMLICAVGWFTLNLAFSWIGDHFWGEVVLFVAGLVQSFCMIPMSVL
                     LLRGADPQFRGRVMGVRMLAVYGMPLGLLLSGPLIEHIGFSATGSLFSLLGIAFTGLI
                     VLRWRSHLWHPAAAANLR"
     gene            1095..2189
                     /locus_tag="VF991_23845"
     CDS             1095..2189
                     /locus_tag="VF991_23845"
                     /inference="COORDINATES: protein motif:HMM:NF021497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A deacylase LpxR family protein"
                     /protein_id="HEX9559547.1"
                     /translation="MHRGIAKTGFLAMTALLAGAAIARAQTAEPLPPPSATDDERRNI
                     FTSQVENDVFNRFSPTDRDYTNGVRIGWLSPAITWLPSSWVALTTVPTFFGEAPSDSV
                     VRRFGVSVGQNLYTPDNIFASQPIFNDRPYAAWLYASFLLQYTYKRHDSKTGADEPVR
                     LDTLQVDLGLIGPAAGGEFAQNNFHRLIGVAQANGWANQLHNEPTFDIAFERRWRIGR
                     TVVFDDPKLELDFIPRIGASLGNVAIYADVGGTARIGKNLRDDFGPTRARPALPGSEA
                     FIGDGSFGWYLFAGIDAIAVGRNIFLDGNTDGYSLRVSHRPFVGEAQAGLAITYRGVR
                     FTYTQVLRTPEFYERDRWDQFGSINVTFRY"
     gene            complement(2196..2351)
                     /locus_tag="VF991_23850"
     CDS             complement(2196..2351)
                     /locus_tag="VF991_23850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003543790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 family protein"
                     /protein_id="HEX9559548.1"
                     /translation="MLGTILLIILILILIGALPRWPYSSGWGYYPSSGVGLILVIIVI
                     LLLMGRL"
     gene            complement(2364..2975)
                     /locus_tag="VF991_23855"
     CDS             complement(2364..2975)
                     /locus_tag="VF991_23855"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEX9559549.1"
                     /translation="MPLDKGKNGFTLPKLPYAEEALAPVISAKTISFHYGKHHKAYIE
                     TLNELIEGTAYAQMSLEDIVKKSAKDEKAKKIFNNAGQAWNHDFYWQSMTAKGGAPAG
                     KIKKALEDSFGGLEDFKKAFKTAAVDQFGSGWAWLIHKDGKLAIETTSNADTPIAHGR
                     TPLLAADLWEHAYYLDYQNRRPDHVQAWLDKLANWSFAEKNLG"
     gene            3381..3866
                     /gene="bfr"
                     /locus_tag="VF991_23860"
     CDS             3381..3866
                     /gene="bfr"
                     /locus_tag="VF991_23860"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEX9559550.1"
                     /translation="MKGNPQIIAELNKLLKNELTAINQYFLHARMMEHWGFERLGKKV
                     YDESIGEMKHADKLIKRILVLDGLPNLQDLGKIAIGETLPECLAADLKLETAARTALV
                     AAVAHCETAKDFVSREIVVDILEDAEDHIDFLETEISLVGKVGEQNYLQTQIGEGKEP
                     S"
     gene            complement(3948..4151)
                     /locus_tag="VF991_23865"
     CDS             complement(3948..4151)
                     /locus_tag="VF991_23865"
                     /inference="COORDINATES: protein motif:HMM:NF016230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9559551.1"
                     /translation="MYVCICRAIREREVDAAVRAGARRPSDIFRACGTRPQCGTCACD
                     MRQRIADTTAHERSIQQTVMAAD"
     gene            complement(4237..4611)
                     /locus_tag="VF991_23870"
     CDS             complement(4237..4611)
                     /locus_tag="VF991_23870"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX9559552.1"
                     /translation="MRFSDQDAAGHINNVALCAYLETARLTFIRDMGMMASAEDGVRG
                     ISAGMTVSFLVESHWPGQVELGSGVMRIGKSSITVGAAAFKNGTCIAAAEMTVVRLKG
                     KTPHPIDPDLRAKLETYLLPGF"
     gene            4697..>4888
                     /locus_tag="VF991_23875"
     CDS             4697..>4888
                     /locus_tag="VF991_23875"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9559553.1"
                     /translation="MAHPIFTEEHDLIRSQLRRFVDEKVRPLGPKWEEAGFVPRAVLR
                     EMGELGFFSLRVPEALGGAG"
BASE COUNT          782 a         1575 c         1562 g          969 t
ORIGIN      
        1 gaccctgatc tcgccgctgt tcggcatggc gggcgatcgc atcggcaatc gcaacctgct
       61 ttgtttgatg cgcgccacct atgtcgcggt ggcggcggcg ctcgccgtgc tgttcgtggc
      121 cgaccttgcc acaccggtgc cggtattcgt gctggccacc atcatgggcc tggtgcggcc
      181 ctccgacatc acgctgcgga ctctcctggt cggcgagacc atgccggccg actatctgat
      241 gcgggccatg ggcgtatcgc gcaccaccgc cgactccgcg cgcatcgtcg gcgcgctgtc
      301 gggcgcgggc ctggtcgcca tcctcggttc gggcatcgcc tatgccgcgg tatgtgccgt
      361 ctatgccgtg agccttgtgc tcacgctcaa tgtcggcgtg cggcgtgtgc gcgtcgtcgg
      421 caaggccgtc gccggctcac cgatgcgcgc gctcggccag ggctttgcct atgtctggtc
      481 gacgcccgac atgcgcgccc tcatgctgct tgccttcctg gtcaacttcg ccgcttatcc
      541 gctggtcggc tcgctgctgg cctacgtcgc caaggacatc tacggcctcg gccaaaccgg
      601 cttgggctgg ctgatcgcct gctttgcggc gggcgcgctc gccggctcga tcgcgatatc
      661 gacccatggc gcgctgatcc ggccggcccg gacgatgctc atctgcgccg tcggatggtt
      721 caccctaaat ctcgccttct cgtggatcgg cgaccatttc tggggcgaag tggtcctgtt
      781 cgtcgccggt ttggtccaga gcttctgcat gattcccatg tcggtgctgc tgctgcgcgg
      841 cgccgacccc caattccgcg gccgggtgat gggcgtgcgc atgctggcgg tctatggcat
      901 gcccctcggg ctcctgctct cggggccgtt gatcgagcac atcggctttt ctgccacggg
      961 gtcgctcttc agcctgctgg gcattgcctt caccggactg atcgttctcc gctggcgcag
     1021 ccatctctgg cacccggccg ccgccgccaa tctccgctga tgcaaccctg aggtgccggc
     1081 tgcgttatcg aacgatgcac cgcgggatcg ccaagaccgg tttcctggcg atgacggccc
     1141 tgctggcggg tgccgccatc gcccgcgccc agaccgcgga gcctctgccg ccgccctccg
     1201 ctaccgacga cgaacggcgc aacatcttca cctctcaggt cgagaacgac gtcttcaacc
     1261 ggttcagccc gaccgaccgg gattatacca acggcgtccg catcggttgg ctgtcgccag
     1321 ccatcacctg gctgccatcg tcctgggtgg cgctgaccac ggtgccgacc ttcttcggcg
     1381 aggcaccttc ggattcggtg gttcgccgct tcggcgtgtc ggtcggccaa aatctctata
     1441 cgcccgacaa tattttcgcc tcgcagccga tcttcaacga tcggccctac gccgcatggc
     1501 tctatgcgag cttcctgctg caatacacct acaagcgtca cgactccaag accggtgcgg
     1561 acgagccggt ccggctcgac accctgcagg tcgacctcgg cctgatcggc ccggccgcgg
     1621 gcggcgagtt cgcccagaac aactttcatc gcctgatcgg cgtggcgcag gccaacggct
     1681 gggccaacca gcttcacaac gagccgacgt tcgatatcgc cttcgaacgc cgctggcgca
     1741 tcggacgcac cgtggtcttt gatgatccca aactcgagct ggattttatc ccgcgcatcg
     1801 gcgcgtcgct gggaaatgtc gcgatttatg ccgatgtcgg cggcacggcg cgcatcggca
     1861 agaacctgcg cgacgatttc gggccgacgc gcgcccggcc ggcgctgccc ggctcggaag
     1921 ccttcatcgg cgacggcagc ttcggctggt acctgttcgc cggcatcgac gccatcgcgg
     1981 tcggccgcaa catcttcctc gacggcaaca ccgacggcta cagcctgcgg gtttcgcacc
     2041 ggccgttcgt cggcgaagcc caggcgggcc tcgccatcac ctatcgcggc gtgcgcttca
     2101 cctataccca ggtgctgcgc acgccggaat tctacgagcg cgaccggtgg gaccagttcg
     2161 gctcgatcaa cgtgacgttc cgctactgac gggacctata gtcgtcccat caaaagcaag
     2221 atcacgatga tgaccaggat caggccgacg ccgctgctgg ggtagtaccc ccagccgctg
     2281 ctgtacggcc atctcggcaa ggcaccgatc aagatcagga tcaggatgat caacagaatg
     2341 gtgcccagca tgacttctcc tccttagccg agatttttct cggcgaacga ccaattcgcg
     2401 agcttgtcga gccaggcctg aacgtgatcg ggccggcggt tctgatagtc gaggtagtag
     2461 gcgtgctccc acaggtcggc cgccagcaat ggcgtgcgac cgtgcgcgat cggcgtgtcg
     2521 gcattggacg tggtctcgat ggcgagcttg ccgtccttgt ggatcagcca cgcccaaccg
     2581 ctgccgaact gatcgacggc ggcggtcttg aaggccttct tgaagtcctc gaggccgccg
     2641 aaactgtctt ccagcgcctt cttgatcttg ccggcgggcg cgccgccttt ggcggtcatg
     2701 ctctgccagt agaaatcatg gttccacgcc tggccggcgt tgttgaagat tttcttggcc
     2761 ttttcgtcct tggccgattt cttgacgatg tcttccagcg acatctgcgc ataggccgtg
     2821 ccttcgatca gctcgttgag cgtctcgatg taggccttgt ggtgtttgcc gtagtggaaa
     2881 gagatggtct tcgccgaaat gacgggggcg agcgcctcct cggcataggg gagtttggga
     2941 agggtaaagc cgttctttcc tttgtctaaa ggcatgacac atgtccttgg gctggcccga
     3001 cggagggtcg ggctgggctg tggtcgggag tgaacgtcca gggcgcgccg acgttgcgat
     3061 gcgccacggc cgggggagca acctttggca gaaacgtgac gttcatgtga tggaatgccg
     3121 ctttctgccg cggaggaaca tcacatgaat gcaatcatct atctggtggg gctcattgtg
     3181 attgtcatgg cgatcctgtc gttcgtcggc ctgcgctgat ggcgaccacg acggttgtca
     3241 ccgaagaggg cctgcacggt cctggtagag acggcgagtc cgacttttcc agcgaacggt
     3301 tctcgctcgc gcgctttcgc ggttgcgtct tgccgcacgc ggagtatctc taggcggcaa
     3361 ccatcgccag gaggctcgcc gtgaagggca atccgcagat catcgccgag ctcaacaagc
     3421 tcctgaagaa cgagctgacg gcgatcaacc agtatttcct gcatgcccgc atgatggagc
     3481 actggggctt cgagcggctg ggcaagaagg tctacgacga atcgatcggc gagatgaagc
     3541 acgccgacaa gctgatcaag cgcatcctgg tgctcgacgg gctgcccaat ctccaggacc
     3601 tcggcaagat tgccatcggc gagacgctgc cggagtgcct ggccgccgat ctcaagctcg
     3661 agactgcggc gcgtacggcg ctggtcgccg cggttgctca ttgcgagacg gcgaaggatt
     3721 tcgtcagtcg cgagatcgtg gtcgacatcc tcgaagatgc cgaggaccac atcgatttcc
     3781 tggagaccga gatctccttg gtcggcaagg tgggcgagca gaactacctg cagacccaga
     3841 ttggcgaggg caaggagccg agttgaagac ccttcgcaaa ggctcagggt gacgagcacg
     3901 gctcgtcaga cccttcgcaa aggctcaggc tgacgagcaa gggctcgtca gtcggccgcc
     3961 atcaccgtct gctggatgga gcgctcgtgc gctgtcgtgt cggcgatccg ctggcgcatg
     4021 tcgcaggcac aggtgccgca ttggggacgg gtgccgcagg cccggaatat gtcggacggg
     4081 cggcgcgccc cggcgcgcac ggcggcgtcc acttcgcgtt ccctgatggc ccggcagata
     4141 cagacgtaca tcgacgcttt gacctctgag tccgtgcaga tgcgacttac tcgcaagcgc
     4201 aacatagggg cggggcctgg tccggtcaag gggtccttaa aaccctggca ataaatacgt
     4261 ttccagcttt gcccgaaggt cagggtcgat cgggtgtggg gttttgccct tgagccggac
     4321 caccgtcatc tcggccgcgg cgatgcaggt cccattctta aaggcagccg cgccaacagt
     4381 gatcgagctt ttgccgatgc gcatgacgcc gctgcccagc tcgacctggc ccggccagtg
     4441 cgactcgacc aggaagctca ccgtcatgcc ggccgagatg ccgcgcacgc cgtcctcggc
     4501 ggacgccatc atgcccatat ccctgatgaa ggtaagccgt gcggtctcga gataggcgca
     4561 gagcgccacg ttgttgatgt ggccggccgc gtcctggtcg gagaagcgca ccgtgtcggt
     4621 gcaccagtgc ggatagatcg aacgatcttg tagtcgtttg tcgcgtgaca tcgccggagt
     4681 gtagcatccc gccgccatgg cacatccgat cttcaccgaa gagcacgatc tcatccgcag
     4741 ccagctccgc cgcttcgtcg acgagaaggt gaggccgctc gggccgaagt gggaggaggc
     4801 gggcttcgtg ccgcgcgcgg tgctgcgcga gatgggcgag ctcggcttct tttcgttgcg
     4861 cgtgcccgag gcgctgggtg gcgccggt
//
LOCUS       DASWGA010001044         2307 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2404707, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001044 DASWGA010000000
VERSION     DASWGA010001044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2404707"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..538
                     /locus_tag="VF991_23880"
     CDS             <1..538
                     /locus_tag="VF991_23880"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559554.1"
                     /translation="TRANVFLNITTPKFAVQAIRKAHDLGWKPLQFIDNPAASIGVVM
                     RPAGIEASKGIVSAAFVKDPTDPQYHDDPEFQAWVAWMKKYYPAGSLEDPQNVVGYVQ
                     AQTMVQVLKQCGDNLTRENVMRQAANLKGFHPAMLLKGINMTTSPTDYQPMEEMALQR
                     FNGERFEVFGELLSARQD"
     gene            565..954
                     /locus_tag="VF991_23885"
     CDS             565..954
                     /locus_tag="VF991_23885"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008129727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX9559555.1"
                     /translation="MAKRKSINYPGFKHENPIPNASRIGNILMSSIISGRDPGTSAMP
                     TDLAGQVANVFKQIKLCVEAAGGSVDDIIKVNFWMKDPATGRAALNGEWAKMFPDPDS
                     RPARHTLALGANNPNHLTCDFTAVIGA"
     gene            complement(1099..1860)
                     /locus_tag="VF991_23890"
     CDS             complement(1099..1860)
                     /locus_tag="VF991_23890"
                     /inference="COORDINATES: protein motif:HMM:NF013788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C13 family peptidase"
                     /protein_id="HEX9559556.1"
                     /translation="MSLGVRTLLLALLLAGCTPESTGAPPALARAPDPPVGSTVPADR
                     WRAVLIAGDNNSPAFDNGIQAMRDKLSARGVRDIRMLTSDPVANPSLPVATAANVSSA
                     LRSGGGEACLIFITSHGDERGVALRAAKGTVSPATLESALDAGCGNRPTVLLVSACYS
                     GIFLTNAMRRPNRVVLTAAAADRVSFGCGAGDRYTYYDQCLLQQFDGAATWQQLAIAT
                     RSCVEALERRMAVSLPSQPQIFVGAAVADLKVPGR"
     gene            complement(1889..>2307)
                     /locus_tag="VF991_23895"
     CDS             complement(1889..>2307)
                     /locus_tag="VF991_23895"
                     /inference="COORDINATES: protein motif:HMM:NF036525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559557.1"
                     /translation="ELERICQQALAGAGDDPRAQLAAFVRVYVVRHCRLRIEALVANR
                     EIGWLGADRVADIRRSRRAIRDILVGILVHGVERGVFDPPQVDGRRDLKAIAMALLDQ
                     CTHVSMWYGPGGELGEEQMARLYADMALRAVGAKPQ"
BASE COUNT          432 a          771 c          763 g          341 t
ORIGIN      
        1 gaccagggcc aacgtcttcc tcaacatcac gacgccgaaa ttcgccgtcc aggcgatccg
       61 caaggcccat gatcttggct ggaaaccgct gcaattcatc gacaatccgg cggcctcgat
      121 cggcgtcgtc atgcggccgg cgggcatcga ggcctccaag ggcatcgttt cggcggcctt
      181 cgtgaaggat ccgaccgacc cgcaatacca cgacgatccc gagttccagg cctgggtggc
      241 gtggatgaag aaatactatc ccgccggcag cctggaagat ccgcagaacg tggtgggcta
      301 tgtccaggcc cagaccatgg tgcaggttct caagcaatgc ggcgacaatc tcacccgtga
      361 aaacgtcatg cggcaggccg ccaacctgaa gggcttccat cccgccatgt tgctcaaggg
      421 catcaacatg accaccagcc cgaccgatta tcagccgatg gaagagatgg cgctgcaacg
      481 cttcaacggc gagcgcttcg aggtgttcgg cgagttgctg agcgcccgcc aagactgaat
      541 gaaccgacac aggagtcatc gcaaatggcc aagcgcaaga gcatcaacta tcccggcttc
      601 aagcacgaga acccgatccc caatgccagc cgcatcggca acatcctgat gtcgagcatc
      661 atcagcggcc gcgatcccgg gaccagcgcg atgccaaccg acctcgccgg acaggtcgcc
      721 aacgtcttca agcagatcaa gctatgcgtc gaagccgccg gtggcagcgt cgacgacatc
      781 atcaaggtga atttctggat gaaggacccg gccaccggcc gcgccgcgtt gaacggtgaa
      841 tgggccaaga tgtttcccga tcccgactcg cggccggcgc gccacacgct ggcgctcggc
      901 gcgaacaatc ccaatcacct gacctgcgac ttcaccgcgg tgatcggcgc ttaacactca
      961 tgttcctctc ccccgacagg gggagaggtt aggtgagggg gttgcacgag ctgtcgaagc
     1021 cccctcaccc agcctctccc cctagcgggg gagaggagca aagatcatga gcgagcggga
     1081 cgctcgcggt ccggaagact agcgccccgg aaccttaagg tcggcgaccg ccgcaccgac
     1141 gaaaatctgg ggctgagacg ggaggctgac ggccatgcgc cgctcaagcg cctcgacgca
     1201 ggagcgggtc gcgatcgcga gctgctgcca ggtcgcggcg ccgtcgaatt gctgcagcag
     1261 gcattgatcg tagtaggtgt accgatcgcc ggcaccgcag ccgaagctga cgcggtccgc
     1321 cgcggcggcg gtgagcacca cgcggttggg ccggcgcatg gcgttggtca agaagatgcc
     1381 gctgtaacag gccgaaacca gcagcacggt cggccggttg ccgcaaccgg cgtcgagcgc
     1441 gctctcgagc gtggcggggc ttacggtccc cttggcggca cgcaaggcga cgccgcgctc
     1501 gtcgccatga ctggtgatga agatcaagca cgcctcgccg ccgccgctgc gcagggcgct
     1561 cgagacattg gcggcggtgg cgaccggcag cgacggattg gcgaccggat cggacgtcag
     1621 catgcggatg tcgcgcacgc cgcgtgcgct gagcttgtcg cgcatcgcct ggatgccgtt
     1681 gtcgaaggcg gggctgttgt tgtcgccggc gatcagcacc gcccgccagc gatcggccgg
     1741 caccgtgctg ccaaccggcg ggtcgggcgc gcgagccagc gccggcggcg cgccggtcga
     1801 ctcaggtgtg cagccggcaa ggagaagagc gaggagaagg gtcctaacgc ctaacgacat
     1861 gcccttcggc tccccttctc actgcggctc actgcggctt ggctcccacg gcgcgcaatg
     1921 ccatgtcggc gtagagcctg gccatctgct cctcgcccag ttcgccgccc ggaccgtacc
     1981 acatcgagac gtgggtacac tggtcgagaa gcgccatggc gatcgccttg aggtcgcgac
     2041 ggccgtcgac ctgcggcggg tcgaacacgc cgcgctcgac gccgtggacc aggatgccga
     2101 ccaggatgtc gcggatcgcc cggcggctgc ggcggatgtc ggcgacgcgg tcggcgccca
     2161 gccatccgat ctcgcggttg gcgaccagcg cctcgatccg cagccggcaa tgacgcacga
     2221 catagacgcg cacgaaggcg gcgagctggg cgcgcggatc gtcgccggct cctgccagtg
     2281 cctgctggca gatccgctcg agctcgg
//
LOCUS       DASWGA010001045         1508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2273311, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001045 DASWGA010000000
VERSION     DASWGA010001045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2273311"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1351
                     /locus_tag="VF991_23900"
     CDS             <1..1351
                     /locus_tag="VF991_23900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559558.1"
                     /translation="AYWGVALSLLWNPHAPAPAKNLAEGAAAIAKGKSVGAKTQRERD
                     YLDALGAMYADYDKVDHRTRMQAYAKAMEQLAQRYPDDDEAQIYYALALNTSASPADK
                     TYANQLKGAAILEPIALRQPQHPGVAHYLIHLYDYPPIAEKGLDAARRYAKVAPAAAH
                     AQHMPSHIFTRVGYWKDSIASNVESSRVAKADKEGGDQLHAMDYLVYAYLQLGQDKEA
                     AAVIDEMNAVTGFAETFIAGPYALAASPARYAVERGDWKTAAALQVRPSLLPHVQAVT
                     HFARALGAARSGNPEAAKADVAKLAELRDRLRDAKDAYWSEQVDIQRQVATAWVLYAE
                     GKQDDALKAMSAAADAEDKTEKHPVTPGVPKPARELYGVMLLESGNAKEALTAFEATL
                     KKEPNRLGAYVGAAIAAEKSGDNAKAREHYKKVVEIADAADKARTDVAGAQAFLQKQ"
BASE COUNT          325 a          494 c          455 g          234 t
ORIGIN      
        1 cgcctattgg ggcgtcgcgc tcagcctgtt atggaatccc cacgcgccgg cgccagcgaa
       61 gaacctcgcc gagggcgctg ccgcgatcgc caagggaaaa agcgtcggcg ccaagaccca
      121 gcgcgagcgc gactacctcg acgcgctcgg cgccatgtac gccgactacg acaaggtcga
      181 tcaccgcacc cgcatgcaag cttacgccaa ggccatggaa caactggcac agcgctaccc
      241 cgacgacgac gaagcgcaga tctattatgc gctcgccctg aacacctcgg cttcgccagc
      301 cgacaagacc tacgccaacc agctcaaggg cgcggccatc ctggagccga tcgccctacg
      361 tcagccgcaa catcccggcg tggcgcatta cctgatccac ctttacgact atccgccgat
      421 cgccgagaaa ggcctcgatg ccgccagacg ctatgccaag gttgcgccag ccgcggcaca
      481 tgcccaacat atgccgtcac acatcttcac gcgcgtcggc tattggaagg attcgattgc
      541 ttccaatgtc gaatcgtcgc gtgtcgcgaa ggcggacaaa gagggcggtg atcagctgca
      601 cgccatggat tacctggtct acgcctatct acaactcggg caggacaagg aagccgcagc
      661 cgtcatcgac gagatgaacg cggtcaccgg gttcgccgag actttcatcg ccgggccata
      721 cgcgctggct gcttcgccgg cacgctacgc cgtggagcgc ggtgattgga agaccgccgc
      781 ggcgcttcaa gtccgtccca gcttgctgcc tcacgtgcag gcggtcactc attttgcgcg
      841 agcgctcggc gcagcccgct cgggcaatcc tgaagccgcc aaggccgacg tcgccaagct
      901 cgctgagctg cgggatagac tgcgcgacgc caaggacgcc tattggtcgg agcaagtcga
      961 tattcagcgg caagttgcga ccgcctgggt gctctatgcc gaaggcaagc aagatgacgc
     1021 gctaaaggcg atgagtgccg ccgccgatgc cgaggacaag accgaaaagc atccggtgac
     1081 gccaggtgtg cccaaacccg cgcgcgaact ctatggcgtc atgctgcttg agagcggcaa
     1141 tgccaaggaa gccctcaccg cctttgaagc gacgctgaag aaagagccga accggctggg
     1201 cgcctatgtg ggcgctgcga tcgccgccga aaagtccggc gacaacgcca aagcgcggga
     1261 gcactacaag aaagtcgtcg aaatcgccga cgccgcggat aaggccagaa ccgacgttgc
     1321 aggcgcgcag gcgttcttgc agaagcaatg agatacccgc ggcgaggaca ccggagcaag
     1381 ccgtgaaaat attctttctg ccgattgtgt tgggcatcct tccgaccctg gccagcgctc
     1441 agcagcttca ggtcactgga tactccggct atctcggcga gtgggagttg accgccaccg
     1501 ttacggaa
//
LOCUS       DASWGA010001046         2851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2274366, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001046 DASWGA010000000
VERSION     DASWGA010001046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2274366"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VF991_23905"
     CDS             complement(<1..509)
                     /locus_tag="VF991_23905"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559559.1"
                     /translation="MKQKSAALPWALIGAACLGSFAATSSGTTRAPFLLDMAADLDVS
                     LPLVANLVSLTATAWGVTSALAGWLSDIVGRRSLLVAAPFALAFSLLAQALAGSFFWV
                     AVWAAVGGGCCGAFMGIIFAEVSGHVPDGQRGRALGWVMSGQSLTLLIGVPMAAAAGA
                     LIGWRGWLL"
     gene            complement(512..1540)
                     /locus_tag="VF991_23910"
     CDS             complement(512..1540)
                     /locus_tag="VF991_23910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9559560.1"
                     /translation="MLAFIVSRLLQSLAVMLAVSFLCFVLFNFVGDPVNNMVGQEATP
                     TERAEMRRELGLEDSVAIQFGRFLGNAATGNFGKSYRLARPVSDLIVERMPATLELVL
                     VAALLALAMGIPLGVLTALRRHTLDSGAVMTFSLAGVAMPTFVIGILLIYVFSVECKG
                     WAPALGLPADWCFPSFGRGETVKLGWWSSGLVTAAGLKAIVLPAFTLSLFQMTLVLRL
                     VRSQMLEVLRTDYIKFARARGLTDRAVHFRHALKNTLLPVITVIGLQVGGLIAFSIIT
                     ETVFQWPGMGQLFIQSVQFADIPVMAAYLVMVSFIFVAINFFVDLLYAAIDPRLRLDR
                     ARLGMAGG"
     gene            complement(1609..>2851)
                     /locus_tag="VF991_23915"
     CDS             complement(1609..>2851)
                     /locus_tag="VF991_23915"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9559561.1"
                     /translation="SSDFRAYISSIKEVKAIDPLTVHIVTDGPNPILPDYTTSILIMS
                     KAWAEKHNVTKPQSFKDKEETYAVRNAMGTGAYMVKQRDPDVRTVMVKNPGYWGAKDF
                     PNYPDELVYSPIKEPATRVAALISGQVDFVLDAPLQDIARIKQTAGLKTEETAQVRSI
                     FLGLDTGSAELKYSDVKGKNPFADQRVRQAMYQAIDINAIKAKVMRNFAAPAGLITAP
                     GVHGYTKELDQRLKYDVASAKKLMADAGYPNGFSVTLDCPNDRYNNDEQICQAVTGML
                     AQIGIKVDLQARSKTLHFPKLQKKDSSLFLLGWGVPTLDSHYVFTFLYQTNDAAKKVG
                     GWNYTGYSNPKMDALTDAMLKEVDQAKRDKMIADAWALAIADMPYLPLHHQLIVWSMS
                     DKVTMPIFANDSPNFKYATIK"
BASE COUNT          507 a          907 c          984 g          453 t
ORIGIN      
        1 cagagcagcc agccgcgcca gccgatcagc gcgcccgccg cggccgccat cggcacgccg
       61 atcagcaggg tcagggactg gccgctcatc acccagccga gcgcgcggcc gcgctggccg
      121 tccggcacgt gaccggacac ctcggcgaag ataatgccca tgaaggcgcc gcagcagccg
      181 ccgccgacag ccgcccacac cgcgacccag aagaaggagc cggcgagggc ctgcgccagc
      241 agggaaaagg cgagcgcgaa cggcgccgcg accaggagcg accgtcggcc gacgatgtcg
      301 gacagccagc cggccagcgc cgaggtgacg ccccacgccg tcgctgtcag cgacaccagg
      361 ttggcgacca gcggcaggct gacatcgagg tcggctgcca tgtcgagcag gaagggcgca
      421 cgcgtcgtgc cgctcgaggt ggcggcgaag gagccaaggc aggccgcgcc gatcagagcc
      481 cacggcaggg cggcagactt ttgtttcacg ctcagccgcc cgccatgccc agccgcgcgc
      541 ggtcgagtcg cagccgcggg tcgattgcgg cgtagagcag gtcgacgaag aaattgatgg
      601 cgacgaaaat gaacgagacc atgaccaggt aggccgccat caccgggatg tcggcgaact
      661 gcaccgactg gatgaagagc tggcccatgc ccggccactg gaacaccgtc tcggtgatga
      721 tcgagaaggc gatcaggccg ccgacctgca ggccgatcac ggtgatcacc ggcagcagcg
      781 tgttcttgag cgcgtggcgg aaatgcacgg cgcggtcggt gaggccgcgg gcgcgggcga
      841 acttgatgta gtcggtgcgc agcacttcca gcatctgcga gcgcaccagg cgcagcacca
      901 gggtcatctg gaacagcgac agcgtgaagg ccggcagcac gatcgccttc aggccggccg
      961 ccgtgacgag gcccgagctc caccagccga gcttcaccgt ttcgccgcga ccgaaggagg
     1021 ggaagcacca gtcggccggc aggccgagcg ccggcgccca gcccttgcac tcgaccgaga
     1081 agacgtagat cagcaggatg ccgatcacga aggtcggcat ggccacgccc gccagggaga
     1141 aggtcatgac ggcgccgctg tcgagcgtgt ggcggcgcag cgccgtcagc acgccgagcg
     1201 ggatgcccat ggcgagcgcc agcagggccg ccaccaacac cagctccagc gtcgccggca
     1261 tgcgctcgac gatcagatcg gagaccggcc gcgccagccg ataactcttg ccgaaattgc
     1321 cggtcgctgc gttgccgaga aagcggccga actggatggc gaccgaatcc tccaacccga
     1381 gctcgcggcg catctcggcg cgctcggtcg gcgtcgcctc ctggcccacc atgttgttca
     1441 ccgggtcgcc cacgaagttg aacagcacga agcacaggaa cgacaccgcc agcatgacgg
     1501 cgagcgactg caacagacgc gacacgatga aggcgagcat ggcgtcagca gtcttccttt
     1561 cctcccctcg tcatacgagg ggaggcggcg cgaagcgccg gagggggctc acttgatcgt
     1621 cgcgtatttg aagttgggcg agtcgttggc gaagatcggc atcgtcacct tgtcgctcat
     1681 cgaccagacg atgagctgat ggtgcagcgg caggtagggc atgtcggcga tggcgagcgc
     1741 ccaggcgtcg gcgatcatct tgtcgcgctt ggcctggtcg acctccttca gcatggcgtc
     1801 ggtcagcgcg tccatcttgg ggttgctgta gccggtgtag ttccagccgc cgactttctt
     1861 ggccgcatcg ttggtctggt agaggaaggt gaagacgtag tgcgaatcga gcgtcggcac
     1921 gccccaaccg agcaggaaga ggctggagtc ctttttctgc agcttgggga agtgcagcgt
     1981 cttggaacgc gcctgcaggt cgaccttgat gccgatctgc gccagcatgc cggtgaccgc
     2041 ctggcagatc tgctcgtcgt tgttgtagcg gtcgttgggg cagtcgagcg tgaccgagaa
     2101 gccattggga tagcccgcgt cggccatcag cttcttggcc gaagcgacgt cgtatttcag
     2161 ccgctggtcg agctccttgg tgtagccgtg cacgcccggc gcggtgatca ggccggcggg
     2221 cgccgcgaag ttgcgcatca ccttggcctt gatcgcgttg atgtcgatcg cctggtacat
     2281 cgcctggcgc acgcgctgat cggcgaacgg gttcttgcct ttgacgtcgg agtacttgag
     2341 ctcggccgag cccgtgtcga ggcccaggaa gatcgagcgg acctgcgcgg tctcctcggt
     2401 cttgaggccg gccgtctgct tgatgcgcgc gatgtcctgc aagggcgcgt cgagcacgaa
     2461 gtcgacctgg cccgagatca gtgccgcgac acgggtcgcc ggctccttga tcggcgagta
     2521 gaccagctcg tcgggatagt tggggaagtc cttggcgccc cagtaaccgg gattcttcac
     2581 catcaccgtg cgtacgtcgg gatcgcgctg cttcaccatg taggcgccgg tgcccatggc
     2641 gttgcgcacc gcgtaggtct cctccttgtc cttgaaactc tgcggcttgg tgacgttgtg
     2701 cttctccgcc cacgccttgg acatgatcag gatggaggtc gtgtagtcgg gcaggatggg
     2761 gttgggtccg tcggtgacga tgtgcaccgt caatggatcg atcgccttca cctccttgat
     2821 cgacgagatg taagcccgga aatcggagct g
//
LOCUS       DASWGA010001047         2054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_495827, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001047 DASWGA010000000
VERSION     DASWGA010001047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_495827"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VF991_23920"
     CDS             <1..316
                     /locus_tag="VF991_23920"
                     /inference="COORDINATES: protein motif:HMM:NF019643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="BBE domain-containing protein"
                     /protein_id="HEX9559562.1"
                     /translation="AISAAEAPPAFAGVRGHEPDLPLAARNARNVGAAMDELRKLVPN
                     HGSYVSESNYFEADWQSAFWGANYPRLRQVKDKYDPDGLFFVHHGVGSEDFSPDGFTR
                     LK"
     gene            complement(300..917)
                     /gene="plsY"
                     /locus_tag="VF991_23925"
     CDS             complement(300..917)
                     /gene="plsY"
                     /locus_tag="VF991_23925"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEX9559563.1"
                     /translation="MISTLILLAGPFLLGYLLGSIPFGLLLTRAAGLGDIRKVGSGNI
                     GATNVLRTGRKGLAVATLLLDALKGVAAVLIAHQVGQLAAVGAAAGAVLGHMFPVWLS
                     FKGGKGMATTLGVMWGLAWPVGAIACAAWLLFAAIFRYSSLATLLSVVVAAIAAWFLT
                     DPRVAILLTLLVPLVWVRHHANIRRLSKGTEPKIGQRSEASTSDA"
     gene            complement(1009..1767)
                     /locus_tag="VF991_23930"
     CDS             complement(1009..1767)
                     /locus_tag="VF991_23930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559564.1"
                     /translation="MAFAGAGQAQTRGQSRDDLLDALTRHIQICGEITDTQQRMSCYD
                     RLQTQVGGVTPQAQPTPTPLQAAPANPPMQPPPAPSAGSSINTAPLTSQPLSPQPLAV
                     PGGGVATLGGAPPAAGAPPSYQDPNAAFDPRSATYRPPETLGPKPQPQMRRTGPRPIP
                     YSSTPQPLVTLGAANLTYGDSRYWQVTVTLTSNTQRALSTQAECTFMNGGRPVSSDYL
                     GPVTIQPGEQITSELIGPPTTTYVDSTNCKILSP"
BASE COUNT          338 a          666 c          732 g          318 t
ORIGIN      
        1 cgccatcagt gcggccgaag cgccgccggc attcgccggc gtgcgcggcc acgagcccga
       61 cctgccgctc gccgcccgca acgcccgcaa tgtcggcgcg gcgatggacg aattgcgcaa
      121 gctggtgccc aaccacggtt cctacgtctc ggaatcgaac tacttcgaag ccgactggca
      181 gagcgccttc tggggcgcca actatccgag gctccggcaa gtgaaggata aatacgatcc
      241 cgacggactc ttcttcgtcc atcacggcgt cggcagcgag gatttcagcc ccgacggttt
      301 cacgcgtctg aagtagaagc ctcgctgcgc tggccgatct tgggttcggt gccctttgac
      361 agccggcgga tgttggcgtg gtggcgcacc cagaccagcg gcaccagcag ggtgagcaag
      421 atcgccacgc gcggatcggt caggaaccag gcggcgatcg cggcgacgac cacactcagc
      481 aacgtggcca gcgaggagta gcggaagatc gcggcgaaca atagccaggc cgcgcaggcg
      541 atggcgccga ccggccaggc caggccccac atcacgccga gcgtcgtggc catgcccttg
      601 ccgcccttga aggagagcca caccggaaac atgtggccga gcaccgcgcc cgccgccgca
      661 ccgacggccg cgagctggcc gacctgatgg gcgatcagca ccgccgccac gcccttcagc
      721 gcgtcgagca gcagggtcgc caccgccagc cccttgcggc cggtgcgcag cacattggtc
      781 gcgccgatat tgcctgagcc caccttgcgg atgtcgccca gtcccgcagc ccgcgtcagc
      841 agcaggccga acgggatcga gcccagcagg tagcccagca ggaacggtcc cgcgaggagg
      901 atcagggtcg aaatcatcgt cggcgcgtct tctcaagctc agttggaccg cgagcgtctc
      961 gctcgctcat gatcatgagc gagcgagacg ctcgcggtcc agaagactct acgggctcag
     1021 gatcttgcag ttggtcgaat cgacgtaggt ggtggtgggc ggaccgatca gctcgctggt
     1081 gatttgctcg cccggctgga tcgtcaccgg cccaagatag tcgctcgaca ccggccggcc
     1141 gccattcatg aaggtgcact cggcctgggt gctgagcgcg cgttgcgtgt tggaggtaag
     1201 cgtcaccgtg acctgccaat agcgcgaatc gccgtaggtc aggttggcgg cgcccagggt
     1261 gaccagcggc tgcggcgtcg atgaataagg aatcggccgc ggtcccgtgc gacgcatctg
     1321 cggctgcggc ttggggccga gcgtttccgg cggccggtag gtcgcgctgc gcggatcgaa
     1381 ggcggcgttg ggatcctgat acgacggcgg cgcgcccgcg gccggcggcg caccgcccag
     1441 ggtggcgacg ccgccacccg gcacggcgag cggctgcggc gagagtggtt gggacgtgag
     1501 gggcgcagtg ttgatcgacg agcccgcact aggcgccgga ggcggctgca tcggcgggtt
     1561 ggcgggtgcg gcctgcagcg gcgtcggcgt gggttgcgcc tgaggcgtca cgccgcccac
     1621 ctgggtctgc agccggtcgt agcaggacat ccgctgctgg gtgtcggtga tctcgccgca
     1681 gatctggata tggcgcgtca aggcgtcgag caagtcgtcg cgcgattggc cgcgagtctg
     1741 ggcctggccg gcgccagcga acgccatcgt cacggccgcg agaagaagaa actgtcgaag
     1801 catgatgctg ccctggtctg tgggaatggg cccgacaata ccagacggag tggccgtttg
     1861 gaggcggctt ttgctacgcc ggtatctagg ctgcctgggg cgcggtcacg aaactgtcgt
     1921 cgcggtagat ggtgcggccg cccacaatgg tggccatggc gcggccctgc accggccgct
     1981 cgtcgaacgg cgaattcttg gtcttgctcc acaggtcggt gcgctcgacc ttccaggcgt
     2041 agtcggcgtc gaac
//
LOCUS       DASWGA010001048         8641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_368354, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001048 DASWGA010000000
VERSION     DASWGA010001048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 8641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8641
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368354"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VF991_23935"
     CDS             complement(<1..330)
                     /locus_tag="VF991_23935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009207975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HEX9559565.1"
                     /translation="MSLKADARVAVVLKGWPRLSETFIAQEIAGLEARGVALEIWSLR
                     RPTDKARHPVHDRVAARTIYLPEYLKDDPRRVFAAWRKARHLPGYKAARQKFLVDFRR
                     DPSANRVR"
     gene            complement(345..1634)
                     /locus_tag="VF991_23940"
     CDS             complement(345..1634)
                     /locus_tag="VF991_23940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9559566.1"
                     /translation="MPASSRSKRVLLYSHDSFGLGHVSRCRTIANALVEADQSVSVLI
                     ISGSPMIGSYEFRSGIDFVRVPGVVKIETGDYDSANLRVGVEHTLEMRTRIIRDTADI
                     YRPDLFIVDKEPLGLRGEVGPTLRLLKDRGTPLVLGLRDVMDDPVALAAEWERKNVVP
                     ALRDLYDEIWIYGLPQINKPLAGIEVPPSVRHKMFYTGYLRRDLPLHTDIPHEIEEID
                     GPFILVTAGGGGDGADLIDWVLAAYESDPHIPYGAVIVFGPFMSATEREAFKERSAKF
                     ANIRTLTFTNNLGALMQRAAGVVAMGGYNTFCEILSFDKKAIIVPRTKPRLEQFIRAR
                     AARNIDLIEMLDADRGRHPHAMATALRQLPQQGLPSDVVVPGLLDGLGNVWRLVAKQL
                     AHPHRGPAALEAPFEVGGVDEANPAAEPAVLPARART"
     gene            1989..4709
                     /locus_tag="VF991_23945"
     CDS             1989..4709
                     /locus_tag="VF991_23945"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9559567.1"
                     /translation="MQRNLFTYIWRHSRHEQLVILSLVVLAQVFYFLSLTVPKSIVNN
                     GIQGNAFKTSKTIPFLVWELDLSAVLPVGVIRVFDGFQVDQLSYLVVMSFVFLAAVVV
                     NGQFKKSINTQKGRMGERMLRRLRYELYDRILRFPPAHFRKVKQAELATMVKDEVEPL
                     GGFIGDAFVQPMFLGGQALTAIIFIVMQNWLLGIIVVVLLAVQMAIIPRLRKPVLVLG
                     RLRQLSARQLAGRIAETADGVNEIHVHGAANYERADISERLGRIFKIRFDLYQKKFVA
                     KFWNNILSQATPFAIYLVGGYFAITGQMDVGAVVGVLLAYKDLPSPIKELIDWDQQRQ
                     DVQIKYEQVIDQFQPEGMMPEALQAIPDGPPPPLGRELALAGVTFSEDGRVKQLDGVS
                     LTLPTCTKTAVIGGASSGKDVLGQVLARLTLPTGGSIKLDGKDFFQLPEYVLGARTGY
                     VGPETYLFPLSVRDNLLFGLKIRPVVPAPYDDATKTVREAFWKESERAGNPALDPSAD
                     WVDYQLAGATGPADLLPRMVEALRQVELDEEIYSLGLRGTIDAAARPDLAEKILKARH
                     SLHGHLQDESYAGLVEPFNADRYNRNLSVAENLLFGTPVGKDFDGDNIAADPYVQSVL
                     KAIGLDLELQRMGLAIAETMVELFSGLSPDNPLFEQYSFISADELPNVRLLLQRLGGK
                     GIEAVPEADRARLMTLPFRYIEARHRLGLIDAAMEDRLLAARRAFAAGLPAELRSAVE
                     FYDFGRYNSAATLQDNVLFGRLVYGQSQAEHRIGALLAEVMNELGLRDSVIEVGLEYN
                     VGVAGKRLPGSQRQKLGIARALIKRPQLLIVNEAVAVFDGRTQDRIRDNILTAATSEE
                     RGVVWIANRPAQAEPFEQIVVMQGGKIAAHGAPSDLAARGGLYAELMASA"
     gene            4729..5184
                     /locus_tag="VF991_23950"
     CDS             4729..5184
                     /locus_tag="VF991_23950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004679746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX9559568.1"
                     /translation="MNLNEEVEVLKGVPIFAKMELAKLKLIAFTGERINYSEGQELCH
                     QGDPGDAMYVILGGVAEVVIDTPAGPISVAELKNNNFFGETAILCDAPRNATIKAREP
                     VITLKISRDMFYRLVAEFPQMAIEMMRELAHRVDDTNKKLQEATANKAA"
     gene            5194..5682
                     /locus_tag="VF991_23955"
     CDS             5194..5682
                     /locus_tag="VF991_23955"
                     /inference="COORDINATES: protein motif:HMM:NF024104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9559569.1"
                     /translation="MSRLDSFIARMQAQRDCLNFLKPAVDALPGPILEVGLGNGRTYD
                     HLRDLFRGRDIYVFERKVAAHPDCIPPDDRLFLGEARESIAFAAEKLGACAALIHSDL
                     GTGDHPANLAMGEWLGPALDSLAAPGGYVLANQPLEVARWRRLPDPPGVPADRYFLYR
                     VG"
     gene            complement(5865..6686)
                     /locus_tag="VF991_23960"
     CDS             complement(5865..6686)
                     /locus_tag="VF991_23960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX9559570.1"
                     /translation="MSLSIATWNINSVRLRIDNVERYLRLRKPDILCLQETKCPDDAF
                     PHLPFEALGYKHRLVQGMKSYNGVAIVSKVPFRAANVHHRCGKEDCRHIEAALDIGGD
                     PILLDNLYIPAGGDIPDPGHNAKFAHKLDFYREMARWFADRKPGRRARKGLRRIAVGD
                     LNVAPLEHDVWSHKQLLKIVSHTPVEVDLFGRLQASLDWIDVPRRFVPADKKLYSWWS
                     YRNNDWRASNRGRRLDHILATPALAGAIKSHRIDVDVRDWDRASDHVPVLATFDV"
     gene            6731..7645
                     /locus_tag="VF991_23965"
     CDS             6731..7645
                     /locus_tag="VF991_23965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013169172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEX9559571.1"
                     /translation="MQMDGDESSNLEDRRGDGGFGGGFGGMGGGIPVGGGGLFKGGLG
                     AIAFIVVALIFGVDPMALLSGLGGDDTSSYAPSTQTSRPARPPAGDPETQFVSRVLKS
                     TEDVWTAAFREMGQQYREPKLVLFRDATRTQCGVGQAAMGPFYCPADERVYLDLGFFD
                     ELASRFHAPGQFPQAYVIAHEVGHHVQNLLGITGKVEQMRQSMSKRDANALSVRVELQ
                     ADCFAGVWANRADQQRGGKMIDDRDVDQALAAASAIGDDRLQRQTQGRVVPDSFTHGS
                     SAQRTRWFRSGLDSGDPRKCDTFRAQQL"
     gene            complement(7747..8448)
                     /locus_tag="VF991_23970"
     CDS             complement(7747..8448)
                     /locus_tag="VF991_23970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX9559572.1"
                     /translation="MAYVVTPPATVGVPVNGTGDLFPVRRIFCVGRNYAAHAREMGHD
                     PDREPPFFFTKPADAVVVCADPKHPTKVAYPSATKNLHHEMELVVALKSGGINIAVDK
                     ALDHVFGYAVGLDMTRRDLQNQAKDMGRPWDMGKGFDQSAPIGEIFPAAKIGHPSKGT
                     IQLDVNGKTRQKSDLNALIWSVPETISYLSGLVALAAGDLIYTGTPDGVAAVVKGDTL
                     AGFVDGCGTVTCTLV"
BASE COUNT         1457 a         2805 c         2930 g         1449 t
ORIGIN      
        1 ccgcacccga ttggccgagg gatcgcgtcg gaagtcgacg agaaactttt gccgcgccgc
       61 cttgtagccg ggcagatgcc gcgccttccg ccaggccgcg aacacgcggc gcggatcgtc
      121 cttgagatac tccggcaggt agatcgtgcg ggccgccacg cggtcgtgca cgggatgacg
      181 cgccttgtcg gtcggccggc gcagcgacca gatttccagc gccacgccac gcgcctcgag
      241 gcccgcgatc tcctgggcga tgaacgtctc ggagaggcgc ggccagcctt tcagcacgac
      301 cgcgacgcgg gcgtctgctt tcagcgacat gaaatgccca gcgatcaggt cctggcgcgc
      361 gccggcagca cggccggttc ggcggccggg ttggcctcgt cgacgccgcc cacctcgaat
      421 ggcgcctcga gcgcggccgg gccgcgatgg ggatgggcga gctgcttggc gaccaggcgc
      481 cagacattgc ccagcccgtc gagcaggccg ggcacgacga cgtcgctcgg caggccctgt
      541 tgcggcagtt ggcggagcgc cgtcgccatg gcgtgcggat ggcggccgcg gtcggcatcg
      601 agcatctcga tcaggtcgat gttgcgcgcg gcgcgggcgc ggatgaactg ttccagcctg
      661 ggcttggtgc gcggcacgat gatcgccttc ttgtcgaagg acaggatctc gcagaacgtg
      721 ttgtagccgc ccatcgccac cacgcccgcg gcgcgctgca tcagagcgcc gagattgttg
      781 gtgaaggtga gcgtgcggat attggcgaat ttcgccgatc gctccttgaa agcttcacgc
      841 tcggtcgccg acatgaacgg gccgaacacg atcaccgcgc cgtaggggat gtgtggatcg
      901 ctctcgtagg cggcgagcac ccagtcgatc aggtcggcgc cgtcgccgcc gccgccggcg
      961 gtgaccagga tgaacggccc gtcgatctcc tcgatctcat gcgggatgtc ggtgtgcagc
     1021 ggcaggtcgc ggcgcagata gccggtataa aacatcttgt ggcgcaccga gggcggtacc
     1081 tcgatgccgg ccaacggctt gttgatctgc ggcaggccat agatccagat ctcgtcgtag
     1141 aggtcgcgca gggccggcac gacgttcttg cgctcccatt cggcggccag cgcgaccggg
     1201 tcgtccatga cgtcgcgcag gccgagaacc aggggggtgc cgcggtcctt caggaggcgc
     1261 agcgtcgggc cgacctcgcc gcgcaggccg agcggctcct tgtcgacgat gaacaggtca
     1321 gggcggtaga tgtcggcggt gtcgcggatg atgcgggtgc gcatctccag cgtgtgctcg
     1381 acgccgacgc ggaggttggc ggagtcgtag tcgccggttt cgatcttgac cacgccgggc
     1441 acgcgcacga agtcgatgcc ggagcggaac tcgtaggagc cgatcatcgg cgaacccgag
     1501 atgatcagca ccgataccga ttggtcggcc tcgacgaggg cgttggcgat ggtgcggcag
     1561 cggctgacat ggccgagacc gaacgagtcg tggctgtaga gcagcacacg cttggaccgg
     1621 ctgcttgcgg gcatcgatgc gtctcccgtt gccgaagcgc ctcctgcccc gaccggtgaa
     1681 gttggccgga ctatgccaca accccaggac cgcgcgaaat cctgcggccc gacacaaaat
     1741 atcgactgta atcaacgccc tgatcgaata tagggtaggc tggtgtcagc tttcatagga
     1801 tgttgatgca gagacaacct catgccgagg agcgaggccg gcgcattgtg atgcgcctga
     1861 cgccggcgtc tcgaagcatg ggcagcgggc gccgtgcccc ttgccgccct gcgagacggc
     1921 cctgcgggcc tcctcagggt gaggtcgtat tcgaaagctg gtactaggtc cgcggcagac
     1981 ggattccaat gcaacgcaat ttgttcacgt acatctggcg gcacagccgg cacgagcagc
     2041 tcgtcatcct gagcctcgtc gtgctggccc aggtgtttta cttcctgtcg ctgaccgtgc
     2101 cgaagtcgat cgtcaacaac ggcatccagg gcaacgcctt caagaccagc aagacgatcc
     2161 cgttcctggt gtgggagctc gacctgtcgg ccgtgctgcc cgtcggggtc attcgcgtgt
     2221 tcgacggctt ccaggtcgac cagctctcct acctggtcgt catgagcttc gtcttcctgg
     2281 ccgcagtggt ggtgaacggc cagttcaaga agagcatcaa cacccagaag ggccgcatgg
     2341 gcgagcgcat gctgcgccgc ctgcgctacg agctctacga ccgtatcctg cgcttcccgc
     2401 cggcccactt ccgcaaggtc aagcaggccg aactcgccac catggtcaag gacgaggtcg
     2461 agccgctcgg cggcttcatc ggcgacgcct tcgtgcagcc gatgtttttg ggcggccagg
     2521 cgctgacggc catcatcttc atcgtcatgc agaactggct cttgggcatc atcgtcgtcg
     2581 tgctgctggc ggtgcagatg gcgatcatcc cgcggctgcg caaaccggtg ctggtgctcg
     2641 gccgtctgcg ccagctctcg gcgcgccagc tcgccggccg catcgccgag acggccgacg
     2701 gcgtcaacga gatccacgtg catggcgcgg ccaactacga gcgcgccgac atctcggagc
     2761 ggctcggccg catcttcaag atccgcttcg acctctacca gaagaagttc gtcgccaagt
     2821 tctggaacaa catcctgtcc caggcgacgc cgttcgccat ctacctggtc ggtggctatt
     2881 tcgccatcac cggccagatg gacgtcggtg ccgtggtcgg cgtgctgctc gcctacaagg
     2941 acctgccctc gccgatcaag gagctgatcg actgggacca gcaacgccag gacgtgcaga
     3001 tcaaatacga gcaggtgatc gaccagttcc agccggaagg catgatgccg gaggcgctgc
     3061 aggcgatccc cgacggcccg ccaccgccgc ttggccggga acttgccttg gccggcgtga
     3121 ccttctcgga ggatggcagg gtgaagcagc tcgacggcgt ctcgctgacg cttccgacat
     3181 gcaccaagac ggcggtgatc ggcggcgcca gctcgggcaa ggacgtgctg ggccaggtgc
     3241 tggcgcggct gacgctgccc accggcggtt cgatcaagct cgacggcaag gatttcttcc
     3301 agcttcccga gtacgtgctg ggcgcccgca cgggctatgt cggaccggag acctacctct
     3361 ttccgctgtc ggtgcgcgac aatctgctgt ttggcctgaa aatccggcca gtggttccgg
     3421 cgccctacga cgatgcgacc aagacggtgc gcgaggcgtt ctggaaggaa tccgagcgcg
     3481 ccggcaatcc agcgctcgat cccagcgccg attgggtcga ctaccagctc gccggcgcca
     3541 ccggtcccgc cgatctgttg ccgcgcatgg tcgaagcgct gaggcaggtc gaactcgacg
     3601 aggagatcta ttcgctcggc ctgcgcggca cgatcgacgc cgcggcccga cccgaccttg
     3661 cggaaaagat cctgaaggcc cgccactcct tgcatggcca cctgcaggac gagtcctatg
     3721 ccggcctggt cgagccgttc aatgccgacc gctacaaccg caacctgtcg gtggcggaga
     3781 acctgctgtt cggcacgccg gtcggcaagg acttcgacgg cgacaacatc gcggccgacc
     3841 cctatgtgca gtccgtgctg aaggcgatcg ggctcgacct cgagctgcag cgcatggggc
     3901 tcgccatcgc cgagaccatg gtcgagctgt tctcgggcct gtcgcccgac aatccgctgt
     3961 tcgagcagta cagcttcatc tccgccgacg agctgcccaa tgtccgcctg ctgctgcagc
     4021 gcctgggcgg caagggcatc gaagcggtgc ccgaggccga ccgggcgcgc ctgatgaccc
     4081 tgcctttccg ctacatcgag gcgcgccatc gcctcgggct gatcgacgcg gcgatggagg
     4141 accgtctgct cgccgcgcgg cgcgccttcg ccgcggggct gcccgccgag ctgcgcagcg
     4201 ccgtcgagtt ctacgacttc ggccgctaca acagcgccgc caccctgcag gacaacgtcc
     4261 tgttcggccg cctggtctac ggccagtccc aggctgagca tcggatcggc gccctgctcg
     4321 ccgaggtgat gaacgagctc gggctgcgcg attcggtgat tgaagtcggg ctcgagtaca
     4381 atgtcggcgt cgccggcaag cgcttgccgg gcagccagcg ccagaagctc ggcatcgccc
     4441 gcgcactgat caagcggccg cagctcttga tcgtgaacga ggcggtcgcc gtcttcgacg
     4501 gccgcacgca ggaccgtatc cgggacaaca tcctgacggc ggcgacgagc gaagagcgcg
     4561 gcgtggtgtg gatcgccaac cgcccggcgc aggccgaacc gttcgaacag atcgtggtca
     4621 tgcagggcgg caagatcgcc gcccacggag cgccgtccga cttggcggcg cgaggcgggc
     4681 tctacgccga actgatggcg tcggcctgag ggaatttagg aggatgcgat gaacctcaac
     4741 gaagaagtcg aagttctcaa gggcgtgccg atcttcgcca agatggagtt ggccaagctg
     4801 aaactgatcg ccttcaccgg cgagcggata aactactcgg agggccagga gctttgccac
     4861 cagggcgatc ctggcgacgc catgtacgtc atcctgggcg gcgtggccga ggtggtgatc
     4921 gatacgccgg ccggcccgat ctccgttgcc gaattgaaaa acaacaattt cttcggcgag
     4981 acggccatcc tgtgcgacgc gccgcgaaac gccaccatca aggcgcgcga gcctgtgatc
     5041 acgctcaaga tctccaggga catgttctat cgcctggtgg cggaattccc gcagatggcg
     5101 atcgagatga tgcgcgagct ggcgcatcgc gttgacgaca ccaacaagaa gctgcaggag
     5161 gcgacggcga acaaggccgc ctgatcagcc gacatgagcc ggctcgatag cttcatcgcg
     5221 cgcatgcagg cgcagcgcga ctgtctcaat ttcctgaagc cggccgtcga cgccctgccc
     5281 ggaccgattc tcgaggtggg attgggcaat gggcgcacct acgaccatct gcgcgatctc
     5341 tttcgcggcc gcgacatcta cgtgttcgag cgcaaggtgg cggcccatcc cgactgcatc
     5401 ccgccggacg accgtctgtt cctgggtgaa gcacgcgaat cgattgcatt cgcggccgag
     5461 aaactcggcg cctgcgcggc gctcatccat agcgatctcg gcaccggcga tcatccagcc
     5521 aacctggcga tgggcgaatg gctcggtccg gcgctcgact cgctcgccgc accgggcggc
     5581 tacgtgctcg ccaaccagcc gctcgaggtg gcgcgctggc gccgcctgcc cgacccgccc
     5641 ggcgtgccag ccgaccggta ttttctgtat cgggtaggct gactccggcc ccctctcctc
     5701 ttgtccctct ccccctggcg ggggagagga agaagacgaa gagagagcgt cagcgcgaga
     5761 acaaccgcag agccgcgcgg gttgggcccg gggtgatgat gcgggcgaga atgccgatca
     5821 caggtcgatc aggatgattc ccaggatgtg cacggtgcct ccccttatac gtcgaacgtg
     5881 gccagcaccg gcacatggtc cgacgccctg tcccagtcgc gcacatcgac gtcgatgcga
     5941 tggctcttga tggcgccggc gagcgccggc gtggccagga tgtggtcgag ccgacggccg
     6001 cggttggagg cgcgccagtc gttgttgcga tagctccacc acgaatagag cttcttgtcg
     6061 gccggcacga agcggcgcgg cacgtcgatc cagtcgagcg acgcctgcag gcggccgaac
     6121 aggtcgacct cgaccggcgt gtgcgagacg atcttgagca gctgcttgtg gctccagaca
     6181 tcgtgctcga gcggcgccac gttgaggtcg ccgacggcaa tgcggcgcag ccctttgcgg
     6241 gcgcgccgcc cgggcttgcg gtcggcgaac catcgcgcca tctcgcggta gaaatcgagc
     6301 ttgtgcgcga acttggcgtt gtggccggga tcgggaatat cgccgccggc cggaatgtag
     6361 agattgtcga gcaggatcgg atcgccgccg atgtcgaggg cggcctcgat atggcggcaa
     6421 tcctccttgc cgcagcggtg atggacgttg gcggccctga acggcacctt cgagacgatg
     6481 gcgacgccgt tgtaggactt cataccttgc accaggcggt gcttgtagcc caaggcctcg
     6541 aacggcagat gcggaaaggc gtcgtccggg cacttggtct cctgcaggca caggatgtcc
     6601 ggcttgcgca gcctcagata gcgttcgacg ttatcgatcc tgaggcggac cgaattgatg
     6661 ttccaggtgg caatggagag gctcattgcc ggccactata tctcgtgacg ctcgatctgg
     6721 gagacctccg atgcagatgg atggcgacga aagcagcaac ctcgaagatc gccgcggcga
     6781 tggcggcttt ggcggcggtt tcggcggcat gggcggcggc attccggtgg gcggcggcgg
     6841 tcttttcaag ggcgggttgg gcgcgatcgc ctttatcgtc gtcgccctga tcttcggcgt
     6901 cgatccgatg gcgcttctga gcgggctcgg cggcgacgat acgtcgagct acgcgccctc
     6961 cacccagacc agccgcccgg cgcgtccgcc cgccggcgat cccgagaccc agttcgtgtc
     7021 gcgcgtgctc aagagcacgg aagacgtctg gacggctgcc tttcgcgaga tgggccagca
     7081 atatcgcgag cccaagctgg tgctgttccg cgacgccacg cgcacgcagt gcggcgtcgg
     7141 ccaggcggcc atgggaccgt tctattgtcc ggccgacgag cgcgtctatc tcgacctcgg
     7201 cttcttcgac gaactggcga gccgcttcca cgcccccggt cagttcccgc aggcctatgt
     7261 gatcgcccat gaggtcggcc accacgtgca gaacctgttg ggtatcaccg gcaaggtcga
     7321 acagatgcgc cagagcatga gcaagcgcga cgccaatgcg ctgtccgtgc gtgtcgagct
     7381 gcaggccgac tgcttcgccg gcgtatgggc caaccgcgcc gaccagcagc gcggcggcaa
     7441 gatgatcgac gacagggacg tcgaccaggc cctggcggcc gcctcggcga tcggcgacga
     7501 ccgcctgcag cggcaaaccc aggggcgagt cgtgcccgac agcttcaccc acggctcgag
     7561 cgcccaacgc acgcgctggt ttcgcagcgg gctcgacagc ggcgatcccc ggaagtgcga
     7621 tacgttccgg gcgcagcagc tctagcgcgt tcctacgcgc tggcgggcgg cagcgccttc
     7681 tgaggcgcga gtcgcggccg tccgcggccg ctgtcccgca ccgagcaaaa agacaatgac
     7741 gcagcgctag accagcgtgc aggtcaccgt gccgcagccg tcgacgaagc ctgccagcgt
     7801 gtcgcccttg accacggcgg cgacgccgtc gggcgtgccg gtatagatca ggtcgccggc
     7861 ggccagcgcc accagcccgg aaagatagga gatcgtctcg ggcacgctcc agatcagcgc
     7921 attgagatcg gacttctggc gggtcttgcc gttgacgtcg agctggatgg tccccttcga
     7981 cggatggccg atcttcgctg cagggaagat ctcgccgatc ggcgcggact ggtcgaagcc
     8041 cttgcccatg tcccacggcc ggcccatgtc cttggcctgg ttctgcaggt cgcgccgcgt
     8101 catgtcgagg ccgacggcgt aaccgaagac atggtcgagc gccttgtcga ccgcgatgtt
     8161 gatgccgccg gatttcaggg cgaccaccag ctccatctcg tgatgcaggt tcttggtggc
     8221 cgaaggataa gcgaccttgg tcgggtgctt ggggtcggcg cagaccacga cggcgtcggc
     8281 cggcttggtg aagaagaagg gtggttcgcg gtcgggatcg tggcccatct cgcgggcatg
     8341 ggcggcatag ttgcggccga cgcagaaaat gcggcggacc ggaaacagat cgccggttcc
     8401 gttgaccggc acgccgaccg tggcgggcgg cgtcacgaca taagccatcg ctttctccct
     8461 caagagcgag cctttatgaa gagcagcgga gttttaggca atgtccgacg aaagcattct
     8521 gaccgttcaa gccgactcgg ccgagacgtc gctcggttgg gcgacgctgg gcggccggcg
     8581 ctggcgctgc acggtgggtg caggcggcgt gcgcgaggac aaggtcgagg gcgacgccgc
     8641 c
//
LOCUS       DASWGA010001049         1524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2276416, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001049 DASWGA010000000
VERSION     DASWGA010001049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2276416"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /locus_tag="VF991_23975"
     CDS             <1..878
                     /locus_tag="VF991_23975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HEX9559573.1"
                     /translation="KCKVALITLAGRPRADGMATGTVPRSRGGTPTPDEPFEFPYGPT
                     VVNMYAMCAMRHMHEFGTTSEQLAWIKVAASHHAQYNEHALLRDVVTVEDVVKSPMIS
                     DPLHRLDCCVITDGGGAIVVVAPEIAAKLKRPKVKLIGAGEFVKTQMGGKVDLTYSGA
                     RSSGAAAFAEAGVKPSDMKYVSIYDSFTITVLMQLEDLGFAEKGKGGKLVADGNLISG
                     TGKLPFNTDGGGLCSNHPGNRGGLTKVLEAVRQLRGEAHPKVQVKNCDLALAHGTGGS
                     LGLRHGSATVILERE"
     gene            882..1283
                     /locus_tag="VF991_23980"
     CDS             882..1283
                     /locus_tag="VF991_23980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HEX9559574.1"
                     /translation="MAAQETKERILPAPATSQETQAYWDAAAKGKLLVRKCTSCGQLH
                     HYPRTICPFCFSDKTEWIEASGKGTIYSYSVMRRASVPYAMAYVTLAEGPRMVTNIVD
                     CDLDKLKCEQAVKVVFKPTDGGPSLPMFTPG"
BASE COUNT          276 a          494 c          508 g          246 t
ORIGIN      
        1 gcaagtgcaa ggtggcgctg atcaccctgg ccggccggcc gcgcgccgac ggcatggcga
       61 ccggcacggt gccgcgctcg cgcggcggca cccccacacc cgacgagccc ttcgagttcc
      121 cctacgggcc gacggtggtg aacatgtacg ccatgtgcgc catgcgccac atgcacgagt
      181 tcggcaccac gtccgagcag ctcgcctgga tcaaggtcgc ggcctcgcac cacgcgcaat
      241 acaacgagca tgccctgttg cgtgatgtgg tcaccgtcga ggatgtggtg aagtcgccga
      301 tgatctccga cccgctgcat cggctcgact gctgtgtcat caccgacggc ggcggcgcga
      361 tcgtggtcgt ggcgccggag atcgcggcca agctcaagcg gcccaaggtc aagctgatcg
      421 gcgcggggga attcgtgaag acccagatgg gcggcaaggt cgatctcacc tattcgggtg
      481 cacgctccag cggcgcggcg gcctttgccg aggcgggcgt gaagccttcc gacatgaaat
      541 acgtgtcgat ctacgacagc ttcaccatca ccgtgctgat gcagctcgag gatctgggtt
      601 tcgccgagaa gggcaagggc ggcaagctgg tggccgacgg caatttgatc tcgggcaccg
      661 gcaagctgcc tttcaacacc gacggcggcg gcctatgcag caaccatccc ggcaaccgcg
      721 gcgggctcac caaggtgctg gaggccgtgc gccagctgcg cggcgaggcg catcccaagg
      781 tgcaggtgaa gaattgcgat ctcgcgctgg cgcacgggac gggcggctcg ctcggcctgc
      841 gccacggcag cgccaccgtc attctggaaa gggagtagaa aatggctgcc caggaaacaa
      901 aagagcgcat actgccggcg ccggccacca gccaggagac gcaggcctat tgggatgccg
      961 ccgccaaggg caagcttctg gtgcgcaaat gcacgagctg cggccagctg caccattatc
     1021 cgcgcacgat ctgtccgttc tgcttcagcg acaagaccga atggatcgag gcttcgggca
     1081 agggcacgat ctattcctac agcgtcatgc gccgtgcctc ggtgccctat gccatggctt
     1141 acgtcaccct ggccgagggt ccgcgcatgg tgaccaacat cgtcgactgc gacctcgaca
     1201 agctgaagtg cgagcaggcg gtgaaagtgg ttttcaagcc gaccgacggc ggcccgtcgc
     1261 tgccgatgtt cacgccgggc taggcggagc gccgtcactc cagtggcgcg tcacaataac
     1321 ctcaccctga ggagcggccg caggccgcgt ctcgaagggt gggaaacagt cgtgctgttg
     1381 cccatgcttc gtgacgccgc gcgtcgcgcg gctcctcagc atgaggtctt ctccgatggt
     1441 ggacgctagc ggtcggctca tcgcagattc cgcggattca gcacgtcgcg cagctggtcg
     1501 cccgccaggt tgatgccgac gatg
//
LOCUS       DASWGA010001050         3819 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2277206, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001050 DASWGA010000000
VERSION     DASWGA010001050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3819
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2277206"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1029)
                     /gene="hutF"
                     /locus_tag="VF991_23985"
     CDS             complement(<1..1029)
                     /gene="hutF"
                     /locus_tag="VF991_23985"
                     /EC_number="3.5.3.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR02022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050416 - formimidoylglutamate deiminase
                     activity [Evidence IEA];
                     GO_process: GO:0019557 - histidine catabolic process to
                     glutamate and formate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formimidoylglutamate deiminase"
                     /protein_id="HEX9559575.1"
                     /translation="MASKLHLELALTPDGWRRDVVVRIDRGTIARVEEPGDGAAERVS
                     GVVLPGLPNLHSHAFQRAMAGLTERRGSEADSFWSWREAMYRFVERLSPDDLEAIAAF
                     AYMEMLEAGFTRVAEFHYLHHQPDGRPYDNVGEMSERIVAAADAVGIGLTLLPVLYCQ
                     GGFLGREPTQGQRRFLNTRESYARLMETRVPGGAIGIAPHSLRALTLEDLKWAAETWR
                     GKPGHIHVSEQTREVDECLAAHKKRPIDLLCDSVEVDQHWCLVHATHADAEEIGRIAR
                     TKAVAGLCPITEANLGDGLFDVPSFLAAGGRLGVGSDSNVRISAADELRTLEYGQRLI
                     HRQRNVLGD"
     gene            1094..2122
                     /locus_tag="VF991_23990"
     CDS             1094..2122
                     /locus_tag="VF991_23990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9559576.1"
                     /translation="MKAVCRFAALAAFLAGSAQAQQLAPSPTLDAVKARGHIECGVHL
                     GLPGFSFANDKGEWTGLDVDYCRSLAAAVLGDATKVKYTPTSVQQRWAVLQSGQVDLL
                     SRNTTITFSRNATLGVNFQGINFYEGQTFVVRTKAKVAAVKDLADATICVAAGSTEEK
                     TAADWFRERNLKVTIINFQKNDDAISAYDQGRCDAYTAGIGALAGQRIKFKDPNEHQI
                     LTEIISNDPQGPVTRWGDERWQLIVRWVLNGTIAAEALGVTSKNVDEMKAKSPSSEVR
                     RLLGAEGKFGQMMGLSDDWMFNAIKQVGNYGESYERTVGMGSALKLKRGANELWTKGG
                     LLYSPPFQ"
     gene            2269..3423
                     /locus_tag="VF991_23995"
     CDS             2269..3423
                     /locus_tag="VF991_23995"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9559577.1"
                     /translation="MIRFLRDRKVRDVLWQVMAAVALVAVVVFFVRNASENMVKAGIA
                     SGFQFLWRDSGIEVPFNITGYKPSDTILALLWTGIVNTLLVSAAAIVVATVIGFTVGL
                     MRLSHNWLLSTLAAVYVEFVRNIPLLFFVLFWYFGVLAALPTPKESYDFLGIAFLNRR
                     GLSIPLPNDVTGFRLALLALLILIGVQIVLARWAKARQARTGRDFPTWTVGFVLCGLL
                     PVAAFVGAGAATSWDVPSLRGFNYRGGFVLVPEFVALFMALSTYTAGFIAEVVRGGIQ
                     SVRQGQIDAARALGLTPGRVVRLVVIPQAMPVIIPPITSQYLNLIKNSSFGAAIAYPE
                     IVAVFMGSALVATGQAIEIIAITLGIYLTIGLAVSAFMNWYNARHRLVTR"
     gene            3420..>3819
                     /locus_tag="VF991_24000"
     CDS             3420..>3819
                     /locus_tag="VF991_24000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559578.1"
                     /translation="MRAARPPLPGWLETLRLRLFATPIDIVVSFLCLYVVWRISLPLV
                     DWLLVEANWRGTSREDCTSAGACWVFIRARFTQFMYGQYPVPERWRVDLLGGLAVVAA
                     AALSWRGLPRRREAAIAAMVVLPPLGIWLLY"
BASE COUNT          563 a         1290 c         1272 g          694 t
ORIGIN      
        1 atcgccgagg acgttgcgct ggcggtgaat caggcgctgg ccgtattcca gggtcctgag
       61 ctcgtcggcg gcggagatgc ggacgttgga gtccgagccc acgcccaggc ggccgcccgc
      121 ggcgaggaac gacggcacgt cgaataggcc gtcgccgaga ttggcttcgg tgatgggaca
      181 gaggccggcg acggctttcg tccttgcgat gcgaccgatc tcctcggcat cggcatgcgt
      241 ggcgtgaacg aggcaccaat gttggtcgac ctccacactg tcgcataaga gatcgatcgg
      301 ccgcttcttg tgcgcggcca ggcactcgtc gacctcgcgg gtttgctcgc tgacatggat
      361 gtggccgggt ttgccgcgcc aggtttcagc tgcccatttc aggtcctcga gggtgagggc
      421 gcgtagcgaa tgtggtgcga tgccgatggc gccgcccggc acccgggtct ccatcagccg
      481 cgcatagctc tcgcgcgtgt tgaggaagcg gcgctggccc tgtgtcggtt ccctgccgag
      541 aaagccgccc tggcaataca gaacgggcaa cagcgtcagc ccgatgccga cggcgtcggc
      601 agcggcgacg atgcgttcgg acatctcgcc gacattgtcg tagggccggc cgtcgggctg
      661 gtgatgcagg tagtggaact cggccacccg cgtgaagccc gcctcgagca tttccatgta
      721 tgcgaaggct gcgatggcct cgagatcgtc cggcgacagc cgctcgacga agcggtacat
      781 cgcctcgcgc cagctccaga aggagtctgc ttcgctgccg cgccgctcgg tgagccccgc
      841 catggcgcgc tggaaggcgt ggctgtgcag gttgggcagt ccgggcagca cgacgcccga
      901 gacgcgctcg gcggctccgt caccgggttc ctccacgcgg gcgatggtcc cgcggtcgat
      961 cctgaccacg acatcgcgcc gccatccgtc gggcgtcagc gccagttcga ggtgcaattt
     1021 actcgccatg accgggttgt tacgctatcg gacaggcatt cgcattgcac gtcttcgaac
     1081 ggggagtttt ctgatgaagg ccgtctgccg cttcgccgct cttgcggctt ttctcgccgg
     1141 ttccgctcag gcgcaacagc tcgcgcccag tcccacgctc gatgccgtca aggcgcgcgg
     1201 ccacatcgag tgcggcgtgc atctcggcct gccgggcttc tccttcgcca acgacaaggg
     1261 cgagtggacc gggctcgacg tcgactactg ccgatcgctg gccgctgccg tgctgggcga
     1321 cgccaccaag gtcaagtaca cgccgacctc ggtgcagcag cgctgggcgg tgctgcagtc
     1381 ggggcaggtc gacctcttgt cgcgcaacac cacgatcacc ttttcgcgca acgccacgct
     1441 cggcgtgaac ttccagggca tcaacttcta cgagggccag accttcgtcg tgcgcaccaa
     1501 ggccaaggtc gcggcggtca aggacctggc cgacgccacg atctgcgtcg ccgccggctc
     1561 gaccgaggag aagaccgcgg ccgactggtt ccgcgagcgc aacctcaagg tcaccatcat
     1621 caacttccag aagaatgacg acgccatctc ggcctacgac cagggccgtt gcgatgccta
     1681 caccgcgggc atcggcgcgc tggccggcca gcgcatcaag ttcaaggatc ccaacgagca
     1741 ccagatcctg accgagatca tctccaacga tccgcaaggg ccggtgacgc gctggggcga
     1801 cgagcgctgg cagctcatcg tgcgctgggt gctgaacggc accatcgccg ccgaggcgct
     1861 gggcgtgacg tcgaagaacg tcgacgagat gaaggccaag tcgccgagct cagaggtccg
     1921 ccgcctgctc ggcgccgagg gcaagttcgg ccagatgatg gggctttccg acgactggat
     1981 gttcaacgcc atcaagcagg tcggcaacta cggcgagagc tacgagcgca ccgtcggcat
     2041 gggctcagcc ctcaagctga agcgcggcgc caacgagctg tggaccaagg gcggcctgct
     2101 ctattccccg ccgttccagt gagcttatgc tcctcatgtt cctctccccc gctaggggga
     2161 gaggctaggt gagggggcgt ccaagactgg gcgcatcccc ctcacccaac ctctccccct
     2221 ggcgggggag aggagactga gaagatccct gaagagacat tcgaagccgt gatccgcttc
     2281 ctgcgcgacc gcaaggtgcg tgacgtcctg tggcaggtga tggccgcggt cgcgctggtc
     2341 gccgtcgtcg tgttcttcgt gcgcaatgcc tcggagaaca tggtgaaggc cggcatcgcg
     2401 tcgggcttcc agttcctgtg gcgcgattcg ggcatcgagg tgcccttcaa catcaccggc
     2461 tataagccca gcgacaccat cctggcgctg ctgtggaccg gcatcgtcaa cacgctcctg
     2521 gtctcggctg ccgccatcgt cgtggcgacg gtcatcggct tcaccgtcgg cctgatgcgg
     2581 ctgtcgcaca actggctgct gtcgaccttg gccgccgtct acgtcgagtt cgtccgtaac
     2641 atcccgctgc tgttcttcgt gctgttctgg tacttcggcg tgctggccgc gctgccgacg
     2701 cccaaggaaa gctacgattt cctgggcatc gccttcctca accgccgcgg cctgtcgatc
     2761 ccgctgccca acgacgtgac gggcttccgg cttgctctgc tcgcgctcct gatcctgatc
     2821 ggcgtgcaga tcgtgctcgc ccgttgggcc aaggcgcggc aggcgcggac cggccgcgat
     2881 ttcccgacct ggacggtggg cttcgtgctg tgcggcctgc tgccggtcgc ggctttcgtt
     2941 ggcgcgggcg ccgccacgag ctgggacgtg cccagcctgc gcggcttcaa ctaccgcggc
     3001 ggcttcgtgc tggtgccgga gttcgtggcg ctcttcatgg cgctgtcgac ctacacggcg
     3061 ggcttcatcg ccgaagtcgt gcgcggcggc atccagtcgg tgcgccaggg ccagatcgac
     3121 gccgcgcggg cgctcggcct cacgccgggg cgcgtcgtgc ggctggtcgt gatcccgcag
     3181 gccatgccgg tgatcatccc gcccatcacc agccagtacc tcaacctgat caagaactcc
     3241 tcgtttggcg ccgccatcgc gtaccctgag atcgtggcgg tgttcatggg ctcggcgctg
     3301 gttgccaccg gccaggcgat cgagatcatc gccatcacgc tcggcatcta tctcaccatc
     3361 gggctcgccg tgtcggcgtt catgaactgg tacaacgccc gccaccgcct ggtaacgcga
     3421 tgagagcggc gcgcccgccg ctgcccggct ggctggagac gctgcggctg cgcctgttcg
     3481 cgacgccgat cgacatcgtc gtgtcgttcc tctgcctcta cgtggtgtgg cgcatttcgc
     3541 tgccgctggt cgactggctg ctggtcgagg ccaactggcg cggcacctcg cgcgaggatt
     3601 gcaccagtgc cggcgcctgc tgggtcttca tccgcgcccg cttcacccag ttcatgtacg
     3661 gccagtatcc cgtgcccgag cgctggcggg tcgatctttt aggcgggctg gccgtggtcg
     3721 cggcggcggc gctttcctgg cggggcctgc cgcggcgccg cgaggccgcg atcgccgcga
     3781 tggtcgtgct gccgccgctc ggcatatggc tgctttacg
//
LOCUS       DASWGA010001051         1539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_1389244, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001051 DASWGA010000000
VERSION     DASWGA010001051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1389244"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="VF991_24005"
     CDS             <1..233
                     /locus_tag="VF991_24005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX9559579.1"
                     /translation="RIRSTRLALGGVAHKPWRLVAAETALSGASLDDIETLKSAIATS
                     FADARPLADNGFKVELAQRVALRALQTAGGRA"
     gene            230..>1539
                     /locus_tag="VF991_24010"
     CDS             230..>1539
                     /locus_tag="VF991_24010"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9559580.1"
                     /translation="MTAIGQALSRVDGRLKVTGAADYTADVRVADAVHAAIVHGTIAR
                     GRTVSIDTTAAGLAPGVLALFTHRNMPRMNPTPKPWSHLHPHGQSYLPLQDDEIHYAG
                     QPIAVVVAKTLDQATHAGTLIKIAYDAQQPVVFGPQTAMEAFDPPQFLWPVASSVGDA
                     DKAIAGAAVRIERIYATSDRHHNQMEPHATTAVWDADGTLTLYETTQHIFGAKELLAI
                     VLGLPPEKINVVSHFLGGGFGGKAYVWPHTLLAALAAKVLDRPVRLQLTRAQMYSMVG
                     HQAATSQTIALGADKTGKLLGIRHESISPTSVFDNYIEYAALSTRSLWGASGGIATNH
                     RIVHVNRNTPTAMRAPHEALGHFALESAMDELAYETGVDPVALRLLNDTAIDPLSGRP
                     FSTRAMRRCLTEGAARFGWEKRTPEPRSMRDGRYLVGQGMAGAI"
BASE COUNT          272 a          539 c          492 g          236 t
ORIGIN      
        1 agcgcatccg ctctacgcga ctggcactgg gcggcgtggc tcacaagccc tggcggctgg
       61 tggccgccga aacggcgctc agcggtgcgt cgctggacga tatcgagacc ctgaagtcgg
      121 caatcgccac gtccttcgcc gatgcaaggc cgctcgccga caacggcttc aaggtcgaac
      181 tggcccagcg tgtcgccctg cgcgcgctgc agaccgccgg aggacgcgca tgaccgcgat
      241 tggacaagcg ctttcccgcg tcgacgggcg gctcaaggtg accggtgccg ccgactacac
      301 cgcagatgtt cgggtcgcag acgccgtgca tgccgccatc gtccacggca cgatcgcccg
      361 cgggcggacg gtgtcgatcg ataccaccgc ggctgggttg gcgcccggcg tgctggcgct
      421 gttcacccac cggaacatgc cgcgcatgaa cccgacaccc aaaccctgga gccatctgca
      481 tccacacggg caatcctatc tgccgctgca ggacgacgag atccactatg ccggccagcc
      541 gatcgccgtg gttgtcgcca agacgctcga ccaggcaacg catgctggca cgctgatcaa
      601 aatcgcctac gacgcacagc agcccgtcgt gttcggcccg cagacggcga tggaagcctt
      661 cgatcctcca caattcctct ggccggtggc atcgtcggtc ggcgatgccg acaaggccat
      721 cgcaggcgct gccgtcagga tcgagcgcat ctacgccacg tccgatcgcc atcacaacca
      781 gatggagccg cacgccacga cggcggtgtg ggacgccgac ggcacgctga cgctctatga
      841 aaccacccag cacatcttcg gcgccaagga acttttggcc atcgtgctcg gcctgccgcc
      901 cgagaagatc aacgtggtct cccacttcct gggcggcggc ttcggcggca aggcctatgt
      961 ctggccgcat accttgctgg cggcgcttgc cgccaaggtc ctggatcggc cggtgcgcct
     1021 gcagctcacg cgcgcccaga tgtattccat ggtcggccac caggcggcca ccagccagac
     1081 gatcgcgctg ggtgccgaca agaccggcaa gcttctaggc atccgccacg agagcatttc
     1141 gccgacgtcg gtgttcgata actacatcga atatgccgcg ctctcgacgc gctcattgtg
     1201 gggtgcgagc ggcggcatcg cgaccaacca caggatcgtc catgtcaatc gcaacacgcc
     1261 cacggccatg cgcgcgccgc acgaggcgct gggccatttc gcactggaaa gcgcgatgga
     1321 cgagctggcg tacgaaaccg gcgtcgatcc ggtggcgctg agactgctga acgacaccgc
     1381 gatcgatccg ctgagcggcc gaccgttctc cacccgtgcc atgcgccgat gcctgaccga
     1441 gggcgcggcg cgcttcggct gggagaagcg gacgcccgag ccgcgctcga tgcgcgacgg
     1501 ccgctacttg gtcgggcagg ggatggccgg tgcgatcta
//
LOCUS       DASWGA010001052         4007 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_2277596, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001052 DASWGA010000000
VERSION     DASWGA010001052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4007
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2277596"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VF991_24015"
     CDS             <1..192
                     /locus_tag="VF991_24015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEX9559581.1"
                     /translation="VEHPFAGRRSTDVSKRLADEENLLTIPGDMFGAGQERFVRLAFA
                     NVADDKIPAVLERLERFGA"
     gene            208..1080
                     /locus_tag="VF991_24020"
     CDS             208..1080
                     /locus_tag="VF991_24020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9559582.1"
                     /translation="MPHATTPDGVKLYYEEAGSGSPILFVHEYSGDWRSWELQMRFFA
                     RRHRCITYSFRGYPGSDVPEPGSMYGQKHAVDDARHMLDHLKIAKAHVVGLSQGAFAT
                     AHFGRLHPDRALSLTLAGVGSGAGRDGHERFKKDAQTTAQRIRQEGMAKYANGLITNP
                     TRSRFKQKDPRGFAEFVKNLSEHADVGAANTMENYQGKRPSLYDFEAEWKKLDLPTLI
                     VCGDEDEPCLQPSLYLKRVMPNAGLAMFAKTGHTVNIEEPDAFNRELWNFLVLAEAGK
                     WTPAQPVAKDASLI"
     gene            complement(1178..1972)
                     /gene="thiD"
                     /locus_tag="VF991_24025"
     CDS             complement(1178..1972)
                     /gene="thiD"
                     /locus_tag="VF991_24025"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEX9559583.1"
                     /translation="MRGRVLIIAGSDSGGGAGIQADIKAVTAMNAFAATAITALTAQN
                     TEGVHGVLAIEPAFIAQQIEVVLADIGADTLKTGMLHSAEVIATVAVSLKKHAPGVPL
                     VVDPVMVATVGHRLLLSEAEAALRETLLPMADLLTPNLPEAEMLAGFPVRVEADMRRA
                     AERLAALGAKAVLMKGGHLEGDRIIDLLFHDGRFDRFEDPRIASRNTHGTGCTLASAI
                     AAGLAQKMSLLDAVTRARTYVRQAIATAPGLGRGHGPLNHAVTVRS"
     gene            complement(1984..3330)
                     /gene="glmM"
                     /locus_tag="VF991_24030"
     CDS             complement(1984..3330)
                     /gene="glmM"
                     /locus_tag="VF991_24030"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEX9559584.1"
                     /translation="MSRSLFGTDGVRGRANSEPMTAEIAMRIGMAAGQVFNRGGHRHR
                     VVIGKDTRLSGYMIEQALGAGFLSVGIDVLLLGPLPTPGVGFLTRAMRADVGVMISAS
                     HNAYEDNGIKLFGPDGFKLSDAVEQQIEKLVNDSAGIQLAAPAKIGRAKRLDDAEGRY
                     IEAVKASAARGLDLSGLKIVVDCANGAAYRVAPTVLWELGAEVIPLSVAPDGFNINGN
                     CGSTHPEQLQAQVILHKADIGIALDGDADRVVLVSEQGQLINGDQLMATIADQWTKDG
                     RLTGGGVVATVMSNLGLERYLGARKLTLLRTKVGDRNVLERMRADGFNLGGEQSGHII
                     MTDHATTGDGLMAALQALGAMTKSSRPASETFRVFEPVPQLLKNVRIKGDAKATLAEA
                     GVKQAIAAAEAQLGAGGRVLVRKSGTEPLIRIMVEGDNSDLVRKTVDQIVEALPRA"
     gene            complement(3341..>4007)
                     /gene="folP"
                     /locus_tag="VF991_24035"
     CDS             complement(3341..>4007)
                     /gene="folP"
                     /locus_tag="VF991_24035"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEX9559585.1"
                     /translation="IVDVGGESTRPGSRPTAPDEELQRVLPVVEGLAKRDAIVSIDTR
                     RASVARACLDAGARIVNDISALEDDAELLPLVARRGVPVVLMHRRGRPEDKYVVPAYA
                     DVVEEVRRFLVERAEACEAAGIARDRIALDPGLGFGKSVEENMALIANAARLADTGYP
                     VVIGASRKSFIGRLTGIAEPRRRDPASVWLAVEAARRGAAIVRVHDVAATRQALAVSA
                     AMR"
BASE COUNT          658 a         1401 c         1320 g          628 t
ORIGIN      
        1 gtcgaacatc cgttcgccgg ccgacgctcg accgacgtgt ccaagcggct ggccgacgag
       61 gagaacctgc tcaccatccc gggcgacatg ttcggcgcgg gccaggaacg cttcgtgcgg
      121 ctggcgttcg ccaacgtcgc cgacgacaag atccccgccg tgctcgagcg gctggaacgg
      181 tttggcgctt agcgctggag tcgaaaaatg ccgcacgcaa ccacacccga cggcgtcaag
      241 ctctattatg aggaagccgg cagcggctcg ccgatcctgt tcgtccacga atacagcggc
      301 gactggcgga gctgggagct gcagatgcgc ttcttcgcgc gccggcaccg ctgcatcact
      361 tactccttcc gcggctatcc cggctccgac gtgccggaac ccggttcgat gtacggccag
      421 aagcacgcgg tcgacgacgc gcggcacatg ctcgaccatc tgaagatcgc caaggcgcat
      481 gtcgtcggcc tgtcgcaggg cgccttcgcg acggcgcatt tcggccggct ccaccccgac
      541 cgcgcgctct cgctcacgct cgccggcgtc ggctcgggcg ccggacgcga cggccacgag
      601 cggttcaaga aggatgccca gacgacggcg cagcgcatcc gccaggaggg catggccaag
      661 tatgccaacg gcctcatcac caatccgacg cgctcgcgct tcaagcagaa ggatccgcgc
      721 ggcttcgccg agttcgtgaa aaatctctcc gagcatgccg acgtcggcgc cgccaacacc
      781 atggagaact accagggcaa gcggccgtcg ctctacgact tcgaggcgga atggaagaag
      841 ctcgacctgc cgacgctcat cgtctgcggc gacgaggacg agccctgcct gcagccgagc
      901 ctctacctca agcgcgtcat gcccaatgcc ggcctggcga tgttcgccaa gaccggccac
      961 acggtgaaca tcgaggagcc cgacgccttc aaccgcgagc tctggaactt cctggtgctg
     1021 gcggaggccg gcaagtggac gccggcgcag ccggtggcca aggacgccag cctgatctga
     1081 aagcgacaaa ggtccctcgg gcttcgccct cgggatgaca gggtgcgttg atcacaaagc
     1141 agctgtcatc ccgagcgcag cgagggacct ttcgtgctca cgatctgacc gttacggcgt
     1201 ggttgagcgg gccgtggccg cggcccaagc cgggcgcggt cgcgatcgcc tggcgtacat
     1261 aggttcgcgc ccgcgtcacg gcgtccaaaa ggctcatttt ctgggcgagg ccggcggcga
     1321 tggccgaggc gagcgtgcag cccgtgccgt gggtgttgcg gcttgcaatg cgcgggtcct
     1381 cgaaacgatc gaaccggccg tcgtggaaca agaggtcgat gatcctgtcg ccttcgagat
     1441 ggccgccttt catcagcacc gccttggcgc cgagcgcagc cagccgttcg gcggcgcgcc
     1501 gcatgtcagc ctcgaccctc accggaaagc ccgccagcat ctcggcctcg ggcaggttgg
     1561 gtgtgagcaa atccgccatc ggcagcagcg tttcgcgcaa ggcggcctcc gcctcgctca
     1621 acagcaggcg atgtccgacc gtggcgacca tcaccgggtc aacgaccagc ggcacgccgg
     1681 gcgcatgctt cttcagggaa acggcaacgg tggcgatcac ctcggcgctg tgcagcatgc
     1741 cggtcttcag cgtatcggcg ccgatgtcgg caagcacgac ctcgatctgc tgggcaatga
     1801 aggcgggctc gatcgccagc acgccatgca cgccctcggt gttctgtgcc gtcagggcgg
     1861 tgatcgccgt ggcggcgaag gcgttcatgg cggtgaccgc cttgatgtcg gcctggatgc
     1921 ccgcaccgcc gcccgaatcg gagccggcga tgatcaggac gcgcccgcgc atggccgtca
     1981 cacctaggct cgcggcagcg cttcgacgat ctggtcgacg gtcttgcgca ccagatccga
     2041 attgtcgccc tcgaccatga tgcggatcag cggctcggta cccgacttgc gcaccagcac
     2101 gcggccgccg gcccccagtt gggcctcggc tgcggcgatc gcctgcttga cgcccgcttc
     2161 ggccagcgtc gccttggcgt cgccctttat acggacgttc ttcagcagtt gcggcaccgg
     2221 ctcgaagacc cggaaggtct cgctggccgg ccggctgctc ttggtcatgg cgccgagcgc
     2281 ctgcagcgcc gccatcagcc cgtcgccggt cgtggcatgg tcggtcatga tgatatggcc
     2341 cgactgttca ccgcccagat tgaagccgtc ggcgcgcata cgctccaata cgttgcggtc
     2401 gccgaccttg gtgcgcagca gcgtgagctt tcgcgccccg agatagcgct ccaggccgag
     2461 gttcgacatc acggtggcga caacgccgcc accggtcagc cgtccatcct tggtccactg
     2521 gtcggcgatg gttgccatga gctggtcgcc gtttatgagc tggccctgtt cggacacgag
     2581 cacgacccgg tcggcatcgc cgtccagcgc gatgccgata tcggccttgt gcaggatgac
     2641 ctgcgcctgc agctgctcgg gatgagtcga gccgcagttg ccgttgatgt tgaagccgtc
     2701 gggtgcgacc gacagcggaa tgacctccgc gcccagctcc cacaacaccg tcggcgccac
     2761 gcggtaggcg gcaccgttgg cgcaatcgac cacgatcttc agtccgctga gatcaaggcc
     2821 gcgcgcagcc gaggccttga ccgcctcgat gtagcggccc tcggcgtcgt cgagccgctt
     2881 ggcgcgcccg atcttcgcgg gcgcggccag ctggatgccg gcggagtcgt tgaccagctt
     2941 ctcgatctgc tgctcgaccg catcggacag tttaaatccg tcggggccga acagctttat
     3001 gccgttgtct tcgtacgcgt tgtgcgacgc cgagatcatc accccgacat cggcccgcat
     3061 ggcgcgggtc aggaacccga cacccggggt cggcagcggc cccagcagca gcacgtcgat
     3121 gccgaccgac aggaagcctg cgcccagcgc ctgctcgatc atgtagccgg acagccgcgt
     3181 gtccttgccg atcaccacgc ggtgacgatg accgccgcgg ttgaagacct ggcccgccgc
     3241 catgccgatg cgcatggcga tctcggcggt catcggttct gagttggcgc ggccgcgcac
     3301 accgtcggtg ccgaagaggg agcgggacat atcccgcaac ctatcgcatc gccgctgaaa
     3361 ccgcgagggc ttggcgggtg gcagcaacgt catggacacg gacgatggcg gcgccccggc
     3421 gcgccgcctc gaccgccagc cacaccgagg ccggatcgcg ccggcgcggc tcggcgatgc
     3481 cggtcagcct gccgatgaag ctcttgcgcg acgcgccgat cacgactgga tagccggtat
     3541 cggccaggcg cgccgcattg gcgatcaggg ccatattctc ctcgacgctc ttgccgaagc
     3601 cgaggcccgg atcgagggcg atacggtcgc gggcgatccc cgctgcctcg caggcttcgg
     3661 cacgctccac caggaagcgg cgaacctcct cgacgacgtc ggcgtaagcc ggaacaacgt
     3721 acttgtcctc cggccggccg cggcggtgca tcaacacgac cggcaccccg cgccgagcga
     3781 ccagcggcaa cagctccgca tcatcctcga gcgccgagat gtcgttcacg atgcgcgcgc
     3841 cggcatccag gcaggcacgc gccaccgagg cacggcgcgt gtcgatggag acgatggcgt
     3901 cgcgcttggc cagaccctcg acgacaggca ggacgcgttg cagctcctcg tccggcgcgg
     3961 tcggtcgcga ccccggccgc gtcgactcgc cgccgacatc gacgatg
//
LOCUS       DASWGA010001053         3900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_377222, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001053 DASWGA010000000
VERSION     DASWGA010001053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 3900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3900
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377222"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..1428
                     /locus_tag="VF991_24040"
     CDS             184..1428
                     /locus_tag="VF991_24040"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX9559586.1"
                     /translation="MSLPPFDRTASRRRFLHFLAASPLLAGSAALAQEQRLPDPSVWG
                     TRTLDKLIGSPREAINVFDFEPVMHEKVPPAHFGYMASGIDDEVTLRANREGFQKFQL
                     RPRRLIDVAALDLRVELFGQSYPSPIALAPTGSNRAFHEDGELAVARAARKGDHLQML
                     STVATTSIEQATEARGRPLWFQLYPTNKWEVAEGLARRAEKAGAQTIVVTVDVLARQN
                     WETFARLWRTDSRTCASCHGLGLPSFVQRKPNFDGLDISGINSTGATNLTWEFLKRLR
                     DTVKTRLVLKGLMTAEDALLAVDNGLDGIIVSNHGGRAEDSGRSTIDALPEIVEAVDG
                     RIPVLVDSGFRRGTDIVKALALGARAVCIGRPYLWGLGAFGQAGVERVLELLHQETRA
                     AMLQVSAPSLKHLTPALVRRAS"
     gene            complement(1509..2027)
                     /locus_tag="VF991_24045"
     CDS             complement(1509..2027)
                     /locus_tag="VF991_24045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012757100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEX9559587.1"
                     /translation="MKKEVKSRRAAALATPTDLGANATKELTGGLNILLADVFALYLK
                     TKNFHWHVSGPHFRDYHLLLDDQATQIDAMTDTIAERVRKLGGTTIRSVGHIKRLQRV
                     LDNDSEYVTPLDMIAELREDNQTLTKHMRILHELCDEHNDIATASLIENWIDETEQRS
                     WFLFETGRRTEG"
     gene            complement(2112..2516)
                     /locus_tag="VF991_24050"
     CDS             complement(2112..2516)
                     /locus_tag="VF991_24050"
                     /inference="COORDINATES: protein motif:HMM:NF023520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3574 domain-containing protein"
                     /protein_id="HEX9559588.1"
                     /translation="MRYLVLLAAITLAACAQPTTPLVCAAPLKTALEIDLYFGRDKQG
                     GGEVSEAEWAQFVAEIVTPRFPDGLSVLNVEGQAREPSGGRIVRERTKLLVVVVFDPP
                     SHRPKVGEVVAAYNARFGQHGVFRTERPVCAG"
     gene            complement(2572..3198)
                     /locus_tag="VF991_24055"
     CDS             complement(2572..3198)
                     /locus_tag="VF991_24055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005095793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HEX9559589.1"
                     /translation="MIELHTWGTPNGRKVSIMLEECGLPYSVHKIDISKGEQFKPEFL
                     RISPNNRIPAVVDSDGPGGKPYSLFESGAILIYLADKTRKFLPSDPVKRYDTLQWLMW
                     QMGGVGPMFGQAHHFLRAAPTKIEYGIKRYVDEAKRLYGVLDKQLASHAFAAGEEYTI
                     ADMAIFPWTARYEWHTVNLADFPNVKRWYDTVNARPAVTKGMAVPYLN"
     gene            complement(3240..>3900)
                     /locus_tag="VF991_24060"
     CDS             complement(3240..>3900)
                     /locus_tag="VF991_24060"
                     /inference="COORDINATES: protein motif:HMM:NF021376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2076 domain-containing protein"
                     /protein_id="HEX9559590.1"
                     /translation="EAFAMQAQERELIAGLFGRLQPFESQPRDPEADSLIRDYITRQP
                     AAPYLLVQTVLVQEQALKAAQQRIAELEANAGGAPASSGFLGSAPRLGPWGAQPAAQA
                     PAQAAPATRSPLQAALSGQPAGGGGFLRSAMATAAGVAGGALLFEGIRGLMGHNPGPF
                     GSAVAQTPSPLLPPDALPDNQSQEQAMAQDSSMPQDDQVDDYDTASDFDGGGGSSDDL
                     A"
BASE COUNT          596 a         1295 c         1342 g          667 t
ORIGIN      
        1 ctatctgcgc tacgacggcg agatcggcac gatggccgcc aatcacacgc tcaatctcgg
       61 tgtgcgcgtc gcttggtgag tcggccgtgg attttcgcat gttcccccat tggatttgca
      121 tcgaggctag gacaggctcc cagggtcggc agcgccacga gacgccgatg ggggaaacct
      181 gccatgtcct tgccgccctt cgaccgcacc gcgagtcgcc gccgcttcct gcatttcctc
      241 gcggcgagcc cgctgctggc cggcagcgct gcgctggcgc aggagcagcg cctgcccgat
      301 ccgtcggtgt ggggcacgcg cacgctcgac aagctgatcg gctcgccgcg cgaggccatc
      361 aacgtcttcg acttcgagcc ggtgatgcac gagaaggtgc cgccggcgca tttcggctac
      421 atggcgagcg gcatcgacga cgaggtcacc ctgcgcgcca accgcgaggg cttccagaag
      481 ttccagctcc ggccgcggcg cctgatcgac gtcgccgcgc tcgatttgcg ggtagagctg
      541 ttcgggcaga gctatcccag cccgatcgcg ctcgcgccga cgggatccaa ccgcgccttc
      601 cacgaggacg gcgagctcgc cgtggcgcgc gcggcgcgca agggcgatca cctgcagatg
      661 ctctcgacgg tggccaccac ctcgatcgag caggcgaccg aagcgcgcgg ccggccgctc
      721 tggttccagc tctatccgac caacaagtgg gaggtcgccg agggcctggc gcggcgcgcc
      781 gagaaggccg gagcgcagac catcgtggtc acggtcgacg tgctcgcccg tcagaactgg
      841 gagactttcg cgcggctgtg gcgcaccgac agccgcacct gcgcctcctg ccacgggctg
      901 ggattgccga gcttcgtgca gcgcaagccc aacttcgacg ggctcgacat ttccggcatc
      961 aacagcaccg gcgccaccaa tctcacctgg gagttcctaa agcggctgcg cgacacggtg
     1021 aagacgcggc tggtgctgaa gggcctgatg acggccgagg acgccctgct cgcggtcgac
     1081 aacgggctcg acggcatcat cgtctccaac catggcggcc gcgctgagga cagcggccgg
     1141 tcgaccatcg acgcgctgcc cgagatcgtc gaggcggtcg acggccgcat tccggtgctg
     1201 gtcgattcgg gcttccgccg cggcaccgac atcgtcaagg ccctggcgtt gggtgcgcgc
     1261 gccgtgtgca tcggccggcc ctatctctgg ggcctcggcg ccttcggcca ggccggcgtc
     1321 gagcgcgtgc tcgagctgct gcaccaggag acgcgcgccg ccatgctgca ggtcagcgcg
     1381 ccgtcgctga agcacctcac cccggcgctg gtgcgccggg cgtcatagcg gaccgcgggc
     1441 gtcccgcccg ctcagattca tgaggcgggc gggacgcccg cggtccgcaa gatcatgatc
     1501 gctgattgct aaccctcggt ccgccggccg gtctcgaaca ggaaccagct gcgctgctcg
     1561 gtctcgtcga tccagttctc gatcaggctg gcggtggcga tgtcgttatg ctcgtcgcac
     1621 agctcgtgga ggatgcgcat gtgcttggtg agcgtctggt tgtcctcgcg cagctcggca
     1681 atcatgtcga gcggcgtcac gtactcggag tcgttgtcga gcacgcgctg caggcgcttg
     1741 atatggccaa ccgagcggat ggtggtgccg ccgagcttgc gcacgcgctc ggcgatggtg
     1801 tcggtcatag cgtcgatctg cgtcgcctgg tcgtcgagca gcaggtggta gtcgcggaaa
     1861 tgcgggcccg acacgtgcca atggaaattc ttggtcttga gatagagggc aaagacgtcg
     1921 gccagcagga tgttgagccc gcccgtcagc tccttggtgg cattggcgcc gagatcggtc
     1981 ggcgtggcca acgccgcggc gcggcgggat ttcacttctt ttttcatggg ctcgctctcc
     2041 tcgaaatttc agctgacgac gcaatctagc ccggttcgcg ggcaaggtga accataccaa
     2101 gggttgacgg attaaccggc gcagaccggg cgctcggtgc ggaagacgcc gtgctggccg
     2161 aagcgcgcgt tgtaggccgc gacgacctcg ccgaccttag gccggtgcga agggggatcg
     2221 aacacgacca ccaccaggag cttggtgcgc tcgcgcacga tccggccgcc ggacggttcg
     2281 cgcgcctggc cctcgacgtt cagcacgctg aggccgtcgg gaaagcgcgg ggtgacgatc
     2341 tcggccacga actgcgccca ctcggcttcg ctcacctcgc cgccaccttg cttgtcgcgg
     2401 ccgaaataga ggtcgatctc caacgctgtc ttgagcggcg cggcgcagac caggggcgta
     2461 gtcggttggg cgcaggcagc gagcgtgatg gcggcaagta agacgagata tctcatggct
     2521 tcgtctagcc ggaccgcggg cctccaggcc cgcggtccgg cgagaggcgc gtcaattcaa
     2581 atacggcacg gccatgccct tggtcacggc agggcgcgca ttgacggtgt cgtaccagcg
     2641 cttgacgttg gggaagtcgg cgaggttgac ggtgtgccac tcgtaccgcg ccgtccacgg
     2701 gaagatcgcc atgtcggcga tggtgtattc ctcgccggcg gcgaaggcgt ggctggcgag
     2761 ctgcttgtcg agcacgccgt acagccgctt ggcctcgtca acatagcgct tgatgccgta
     2821 ttcgatcttg gtcggcgccg cgcgcaggaa gtgatgggcc tggccgaaca tcggccccac
     2881 cccgcccatc tgccacatca gccattgcag cgtgtcgtat cgcttgaccg gatcgctggg
     2941 caggaacttc ctggtcttgt cggcgagata gatcaggatc gcgcccgatt cgaacaggct
     3001 atagggcttg ccgcccggac catcggaatc gacgaccgcc gggatgcggt tgttggggct
     3061 gatgcgcagg aactccggct tgaactgctc gcccttggag atgtcgatct tgtgcacgct
     3121 gtagggcagc ccacactcct ccagcatgat ggataccttg cggccgttgg gcgtgcccca
     3181 cgtatgcagc tcgatcatct atccgttctc cccctcttgt tttggaaagc cgcgcctgct
     3241 caggccaagt cgtcgctcga tcctccgccg ccatcgaagt cggatgcggt gtcgtaatcg
     3301 tcgacctggt cgtcctgcgg catcgagctg tcctgggcca tggcctgctc ctgcgactgg
     3361 ttgtcgggca gcgcatcggg cggcagcaac ggcgacggcg tctgggcgac ggccgaaccg
     3421 aacggcccag gattgtggcc catcaggccg cgaatgccct cgaacagcag cgcgccgccg
     3481 gcgacgccgg ccgcggtcgc catcgccgag cgcaggaagc cgccaccgcc tgccggttgc
     3541 cccgacaagg ccgcctgcag cggcgagcgg gtcgccggcg cggcttgcgc cggcgcctgc
     3601 gcggccggtt gagcgcccca gggcccgagc cgtggcgcgc tgccgaggaa gcccgacgac
     3661 gccggcgcac cgccggcgtt ggcctcgagc tcggcgatgc gctgctgcgc ggccttgagc
     3721 gcctgttcct gcaccaacac ggtctgcacc agcagatagg gcgccgccgg ctggcgtgtg
     3781 atgtagtcgc ggatcagcga gtcggcctcg ggatcgcgcg gttgggattc gaacggttgc
     3841 agacggccga ataggccggc gatgagttcg cgttcctgtg cttgcatggc aaatgcctcc
//
LOCUS       DASWGA010001054         6283 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Reyranella sp. isolate SMAG_U2803 k141_377795, whole
            genome shotgun sequence.
ACCESSION   DASWGA010001054 DASWGA010000000
VERSION     DASWGA010001054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960451
            Sequence Read Archive: SRR10360649
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Reyranella sp. (soil metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 6283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 06:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 24
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6283
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377795"
                     /isolate="SMAG_U2803"
                     /isolation_source="soil"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="39.7292 N 123.6419 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VF991_24065"
     CDS             complement(<1..317)
                     /locus_tag="VF991_24065"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9559591.1"
                     /translation="MSRFVPWALVALCFALGVASRSISDSFVVFVPALQAAFDASRSS
                     ITVVYSFALLVGGTGAPLAGWIVDRFGLRALTVIGMSAAALATLSASLASEIWHLYVG
                     LGVV"
     gene            378..1106
                     /locus_tag="VF991_24070"
     CDS             378..1106
                     /locus_tag="VF991_24070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559592.1"
                     /translation="MDDTLIIARGFNGPRLSGNGGYVGGVMAERFERHFKTGGAVEIT
                     LRAPVPIETPLQVSRADDALLLKAGRTLLCEARAGAVDHLKPPPPPSDWADVMRRGVI
                     GGSPEDSDFHWCIVCGRGRPVGDGLRVLSTHGPGPGRSLSCYLPHANHADAEGRIRPE
                     FLWGALDCPGAWAVQEPDDWRPALTGRLTAKVIEPPKVGERCAVVGWKIGADGRKLHS
                     GTALYSEAGRLCAIGHCTWILLKD"
     gene            complement(1217..2731)
                     /locus_tag="VF991_24075"
     CDS             complement(1217..2731)
                     /locus_tag="VF991_24075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9559593.1"
                     /translation="MAVTSGLSVSQPYPGELQQPHSAWALSWPLALGLLLFVWLPNLN
                     GLLADPDTHWHITVGNWMLAHGTVPTIDSYSFTFAGQPWIAKEWLSQILLALAYDGGG
                     WGGVTTLCAASIGFTFALMTRLLMRDIRPLPALLFAVAAVAMVTPHLLARPHVLAFPL
                     TLIWVAGLVRAVEERRAPRPLLLLVMLAWASMHGGFTLGLLLAGALALEALLGARDGS
                     ERKDLFIAWAKFGVAAVLVACITPYGPESMLVTFRIFNLGEALGMISEWRSPNFQDLP
                     QQELVLLIALYFCLSRGVKLPLIRLLIVLGLVHLFLKYVRNAELLAMLAPLIVAPVLA
                     RQWPTLRPSAEPPTASALRQRLAALGRPAGRNALALCLVLGAVYAGGLIRFAGIRPPD
                     AILPSAALDFIRDAELKGNVFNHYGFGGFLIHAGIKTFIDGRGELYGGDFIKRYVKIV
                     GLKDDQPLEQTLDEFRIDWTLLLKDQPANAVLAHLPNWKRAYSDDTATIYVRQR"
     gene            2835..5066
                     /gene="selD"
                     /locus_tag="VF991_24080"
     CDS             2835..5066
                     /gene="selD"
                     /locus_tag="VF991_24080"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR03169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEX9559594.1"
                     /translation="MQAAPLLKDLVLVGGGHAHVHVVKSFAMKPMPGVRLTLIGRDVE
                     TPYSGMIPGFVAGRYTFDECHIDLARLCAWSGGRLIQAEATGIDRANRQVLLKDRPPL
                     SYDLLSLDVGSAPNLDTIPGAAEWATPVKPIAELGRRWLAFLERMASWLGPLNIVVIG
                     GGAGGVELALGIDHRLREVATGAALQVTLATKDQILAGQNDAVRQKMRAIFQRRGLGL
                     LERAATVRIERGAVQLEGGKWLEADAVFVVTEASAAKWFAKTGLPIDERGFLAVDDTL
                     ASTGDPLVFAVGDCATVLKHPRPKAGVFAVRQGPPLAANLRRVLLGQAARPFTPQNRY
                     LSILGTGDGRAVATRNGWAAEGAWVWRWKDHIDRKWMRMYREAPARPMQRMTSTPPDP
                     ALADAEARRLLTDIGMRCGGCGAKVGANVLARVLARLGPSPGSNITIGLDAPDDAAMI
                     EVPAGKALVQSVDFFRTFVDDPYVFGEVAAVHALGDVWAMGAAAHSALALAVVPAAAE
                     RLMEEDLFQMLAGARHVLDDTGCALIGGHSGEGPEAALGFSVNGLVDPARALRKGGLL
                     AGDRLVLTKPLGTGVIFAAAMRGAARGTWIEAALASMRRPSSKAAATLVAAGAHACTD
                     VTGFGLAGHLAEMIRASGRGDDVSVDLHLDALPALAGAVELFAQGFASSLQPENLRAR
                     HLIDGMDRAASHPKLPLLFDPQTAGGLLAAVPAHALGSIEGVVIGEVLARTEGRSFIR
                     LVD"
     gene            5077..5463
                     /locus_tag="VF991_24085"
     CDS             5077..5463
                     /locus_tag="VF991_24085"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX9559595.1"
                     /translation="MAHARSSIGTVNYATAITTGHHKLTADEGPELGGKDAGPSPYDL
                     LTSALAACTAITLRMYADRKQWPVTAVQADVTFIREGDKQHIDRVLAIEGNLDDEQKK
                     RMADIAERTPVTVTLKGGLEIKTTLA"
     gene            complement(5546..>6283)
                     /locus_tag="VF991_24090"
     CDS             complement(5546..>6283)
                     /locus_tag="VF991_24090"
                     /inference="COORDINATES: protein motif:HMM:NF006093.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEX9559596.1"
                     /translation="GGESEGDAHMTTLSSDLREALAKVGTSTLTGVLNRRGLRSMTLY
                     DVWPLRPEQPRMVGIAFTMRFIPSREDKDGPTSTNRSMIQPQAMEECPPGHVLMIDSR
                     GDSRAASAGDLYVGRLKARGAAGIVTDGGFRDTDGVFKTGLPAYHRRPSSPPSPIAHR
                     PVDLNLPIACGGVAVYPGDIVVGDRDAVLVIPSDIVEAVAEEALNTYRYEEFAEAEVA
                     RGRSLKGLFPVAGDDAKRDYEAWKKAR"
BASE COUNT         1033 a         2114 c         2222 g          914 t
ORIGIN      
        1 acgacgccga ggccgacata gaggtgccag atctcgctcg ccagcgaggc gctgagcgtc
       61 gccagcgcgg cggccgacat gccgatgacg gtgagcgcgc gcaggccgaa gcgatcgacg
      121 atccagccgg cgagcggcgc gccggtgccg ccgaccagga gggcgaagct gtagaccacg
      181 gtgatcgagc tgcggctggc atcgaaggcg gcctgcagcg ccggcacgaa gacgacgaag
      241 gaatcgctga tcgagcggct cgccacgccc agcgcaaaac acagcgccac cagcgcccac
      301 ggcacgaacc ggctcatcgg cttcaccctt gcatcgtcgg ggcgcgaacg gcaagttccg
      361 cgccgtggag ggtttgaatg gacgatacgc tgatcatcgc gcggggcttc aacggcccgc
      421 ggctgtcagg caatggcggt tatgtcggcg gcgtgatggc cgagcggttc gagcggcatt
      481 tcaagaccgg cggcgcggtc gagatcacgc tgcgcgcgcc ggttccgatc gagacaccgt
      541 tgcaggtatc gcgcgccgat gacgcgttgt tgctcaaggc cggcagaacg ctgctatgcg
      601 aggcgcgcgc cggcgccgtc gatcacctga agccgccgcc gccgccgtcc gactgggccg
      661 acgtgatgcg ccgcggcgtg ataggcggca gtcccgagga cagcgacttc cattggtgca
      721 tcgtgtgcgg ccgcggccgc ccagtcggcg atggcctgcg cgtgctgagc acgcacggac
      781 cgggacccgg acgctcgctc tcctgctacc tgccgcacgc caatcacgcc gatgccgagg
      841 gccgcatcag gcccgaattc ctgtggggcg cgctcgattg ccccggcgcc tgggcggtgc
      901 aggagcccga cgattggcgg ccggcgctga ccggccgcct gacggccaag gtgatcgaac
      961 cgccgaaagt cggcgagcgc tgcgcggtgg tcggctggaa gatcggcgcc gacggccgca
     1021 agctccattc cggcacggcg ctctacagcg aagcgggccg cctctgcgcc atcggccact
     1081 gcacgtggat tttgctcaag gattaaagct gtcatcgcgc gcggggtaat ccccgcgctg
     1141 aagcgcagcg aaggatctca tgccgtggca agcggcgata aggtccttcg cttcgctcag
     1201 gacgacatga acgcgtctaa cgctggcgga cgtagatcgt cgcggtatcg tcgctgtagg
     1261 cgcgcttcca gttgggcagg tgcgccagca ccgcgttggc cggctggtcc ttcagcagca
     1321 gcgtccagtc gatgcggaat tcgtcgagcg tctgctcgag cggctgatcg tccttcaagc
     1381 cgacgatctt gacgtagcgc ttgatgaagt cgccgccata gagctcgccg cgtccgtcga
     1441 tgaaggtttt tatgccggca tggatcagga atccgccgaa gccgtagtga ttgaagacgt
     1501 tgcccttgag ctcggcgtca cggatgaaat cgagggccgc cgacggcagg atggcgtccg
     1561 gcgggcggat gccggcaaag cggatcaggc cgccggcata gaccgcgccg agaacaagac
     1621 agagcgccag ggcgttgcgg cccgccggac ggccgagcgc ggccagccgc tggcggagcg
     1681 ccgatgccgt cgggggctcg gcgctcggcc tcagggtcgg ccattggcgc gccagaaccg
     1741 gagcgacgat gagcggcgcc agcatcgcca gcagttcggc gttgcgcacg tacttcagga
     1801 acaggtgaac caggccgagc acgatcaaca gccgaatcaa cggcagcttg acgccgcgcg
     1861 acaggcagaa atagagggcg atcagcagca ccagttcctg ctgcggcagg tcctggaagt
     1921 tgggcgagcg ccattcgctg atcatgccca aggcctcgcc gagattgaag atgcggaagg
     1981 tgaccagcat cgactccgga ccatagggcg tgatgcaggc gaccaggacg gcggcgacgc
     2041 cgaacttcgc ccacgcgatg aacaggtcct ttcgctcgga gccatcgcgc gcgccgagca
     2101 aggcctcgag cgccagcgcg ccggccagca gcagccccag ggtgaagccg ccgtgcatgc
     2161 tggcccaggc cagcatgacc agcagcagca acggccgcgg cgcgcggcgt tcctcgacgg
     2221 cacgcaccag cccggccacc cagatcagcg tgagcgggaa agccagcacg tgcggacgcg
     2281 ccagcaggtg cggcgtcacc atcgcgaccg cggcgaccgc gaacagcagc gccggcagcg
     2341 gacggatgtc gcgcatcaac aggcgcgtca tcagcgcgaa ggtgaagccg atcgacgcgg
     2401 cgcacagggt cgtcacgccg ccccaaccgc cgccatcgta ggcaagcgcc agcaggatct
     2461 gcgacagcca ctccttggcg atccacggct ggccggcaaa ggtgaaggaa tagctgtcga
     2521 tcgtcggcac cgtgccgtgc gccagcatcc agttgccgac ggtgatgtgc caatgggtgt
     2581 cggggtcggc cagcaggcca ttcaggttgg gcagccagac gaacagcagc aggcccagcg
     2641 ccagcggcca cgacagcgcc cacgccgagt gcggctgctg caactcacca ggatagggct
     2701 gggaaaccga aaggccggaa gtaacggcca tgaatagctc cggaataact gaaagaaagt
     2761 aatataatgg cctgatatac aatattttat aggaatgtac cagaggcccg gccgatcgga
     2821 tatacggggt ctcgatgcag gccgcccccc ttctcaagga cctcgtgctg gttggcggcg
     2881 gccacgccca tgtccatgtg gtcaagagct tcgccatgaa gccgatgccc ggcgtgcgcc
     2941 tcaccctgat cgggcgcgac gtcgagacgc cctattccgg catgatcccg ggcttcgtcg
     3001 ccggccgcta cacgttcgac gaatgccaca tcgacctggc gcggctgtgc gcctggtccg
     3061 gcgggcgcct gatccaggcc gaggcgaccg gcatcgaccg cgccaaccgc caggtgctgc
     3121 tgaaggaccg cccgccgctc tcctacgatc ttctatccct cgacgtcggc tcggcgccca
     3181 acctcgacac cattcccggc gcggccgagt gggcgacgcc ggtgaagccg atcgccgagc
     3241 tcggccggcg ctggctcgcc ttcctcgagc gcatggcctc gtggctgggg ccgctcaata
     3301 tcgtcgtgat cggcggcggc gcgggcggcg tcgaactggc gctgggaatc gaccatcgcc
     3361 tgcgcgaggt ggcgacgggt gcggcgctgc aggtcacgct cgccaccaag gaccaaatcc
     3421 tcgccggaca gaacgacgcc gtgcgccaga agatgcgggc gatcttccag cgccgtggcc
     3481 ttggattgct cgagcgggcc gcgaccgtgc gcatcgagcg cggcgcggtg cagctcgaag
     3541 gcggcaaatg gctggaggcc gacgcggtgt tcgtcgtcac cgaggcgagt gccgccaaat
     3601 ggttcgccaa gaccggcctg ccaatcgacg agcgcggctt cctcgccgtc gacgacacgc
     3661 tggcgtcgac cggcgatccg ttggtcttcg cggtcggcga ttgcgccacg gtgctaaagc
     3721 atccgcggcc caaggcgggc gtgttcgccg tgcgccaggg gccgccgctg gccgccaatt
     3781 tgcggcgcgt gctgctcggc caagccgctc ggccgttcac gccgcaaaac cgctatctct
     3841 cgatcctcgg caccggcgat ggccgcgccg tggcgacgcg caatgggtgg gcggccgaag
     3901 gcgcctgggt gtggcgctgg aaggaccata tcgaccgcaa gtggatgcgc atgtatcgcg
     3961 aggcgccggc caggccgatg cagaggatga cgtcgacgcc gcccgatccg gcgctggccg
     4021 atgccgaagc ccgccgcctg ctgaccgaca tcggcatgcg ctgcggcggc tgcggcgcca
     4081 aggtcggcgc caacgtgctg gcgcgcgtgc tggcgcggct cggcccctcg cccggctcca
     4141 acataacgat cggtctcgac gcgcccgacg atgcggcgat gatcgaggtg ccggcgggca
     4201 aggcgctggt gcagtcggtc gatttctttc gcaccttcgt cgacgacccc tacgtcttcg
     4261 gcgaggtcgc cgccgtccat gcgctgggcg acgtctgggc gatgggggcg gcggcccaca
     4321 gtgcgctggc gctggccgtc gtgccggccg ccgccgagcg gctgatggaa gaggatcttt
     4381 tccagatgct ggcgggcgcg cgccatgtgc tcgatgacac gggctgcgcg ctgattggcg
     4441 gccattccgg cgagggcccg gaagcggcgc tgggcttttc ggtgaacggc ctggtcgatc
     4501 cggcgcgcgc cttgcgcaag ggcgggcttt tggccggcga caggctggtg ctgaccaagc
     4561 cgctcggcac cggcgtgatc ttcgccgccg ccatgcgcgg cgcggcgcgc ggaacctgga
     4621 tcgaggcggc gctcgcctcg atgcgccggc cctcgtccaa ggccgccgcg actctcgtcg
     4681 ccgccggcgc ccatgcctgt accgacgtga cgggcttcgg cctcgccggc catctcgccg
     4741 agatgatccg cgccagcggc cgcggcgacg acgtttcggt cgatctccat ctcgacgccc
     4801 tgcccgcgct cgcgggcgcc gtcgagctgt tcgcccaggg ctttgccagc tcgctgcagc
     4861 cggagaacct gcgggcgcgc cacctgatcg acggcatgga ccgcgccgcg agccatccca
     4921 agctgccgct gctgttcgac ccgcagaccg cgggcggact gttggccgcg gtgccggcgc
     4981 acgcgcttgg gagcatcgag ggcgtcgtca tcggcgaggt tttggcgcgg accgagggcc
     5041 gctctttcat tcgtctcgtt gactaggaag gaaatcatgg cgcacgcacg gtcaagcatc
     5101 ggcacggtga attacgcgac ggcgatcacg accggccatc acaagctcac cgccgacgaa
     5161 gggcccgagc tgggcggcaa ggatgccgga ccttcgccct atgacctgct gacctcggca
     5221 ctggccgcct gcacggcgat cacgctgcgc atgtacgccg accgcaagca gtggccggtg
     5281 acggcggtgc aggccgacgt gacgttcatc cgcgagggcg acaagcagca tatcgaccgc
     5341 gtgctcgcca tcgagggcaa cctcgacgac gagcagaaga agcgcatggc cgacatcgcc
     5401 gagcgcacgc cggtcaccgt gaccctgaag ggcggcctgg agatcaagac gacgttggct
     5461 tgagcggagc gcccccagca atcatgttcc tctcccccaa gggggagagg aacatgaggg
     5521 agtaagcgat cttctcgcgc tccattcagc gagccttctt ccacgcctcg tagtcgcgct
     5581 tggcgtcgtc gccggccacc gggaacaggc ctttcagcga gcggccgcgc gccacctctg
     5641 cctcggcgaa ctcctcgtag cggtaggtgt tgagcgcctc ctcggcgacc gcttcgacga
     5701 tgtcggatgg gatcaccagc acggcgtcgc ggtcgccgac cacgatgtcg ccgggataga
     5761 ccgcgacgcc gccgcaggcg atcggcaggt tgaggtcgac cgggcggtgg gcgatcgggc
     5821 tgggcggcga ggacggccgg cggtgatagg ccggcaggcc ggtcttgaac acgccgtcgg
     5881 tgtcgcgaaa gccgccgtcg gtgacgatgc cggcggcgcc gcgcgccttc agccggccga
     5941 catagaggtc gccggccgag gcggcgcgcg aatcgccgcg cgaatcgatc atcagcacgt
     6001 ggccgggcgg gcattcctcc atcgcctgcg gctggatcat gctgcggttg gtcgaggtcg
     6061 ggccgtcctt gtcctcgcgc gaggggatga agcgcatagt gaaggcgatg cccaccatgc
     6121 gcggctgctc ggggcggagc ggccagacgt cgtaaagcgt catgctgcgc aggccccggc
     6181 ggttcagcac gccggtcagg gtcgaggtgc cgaccttggc cagcgcctcg cgcaaatcgg
     6241 acgacagggt ggtcatgtgg gcgtctccct cgctttcgcc gcc
//
